BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780684|ref|YP_003065097.1| flagellum-specific ATP
synthase [Candidatus Liberibacter asiaticus str. psy62]
         (438 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780684|ref|YP_003065097.1| flagellum-specific ATP synthase [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040361|gb|ACT57157.1| flagellum-specific ATP synthase [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 438

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/438 (100%), Positives = 438/438 (100%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG
Sbjct: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG
Sbjct: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM
Sbjct: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT
Sbjct: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS
Sbjct: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL
Sbjct: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS
Sbjct: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420

Query: 421 PSDLSSEDVFQEITKKLQ 438
           PSDLSSEDVFQEITKKLQ
Sbjct: 421 PSDLSSEDVFQEITKKLQ 438


>gi|315121851|ref|YP_004062340.1| flagellum-specific ATP synthase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495253|gb|ADR51852.1| flagellum-specific ATP synthase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 449

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/438 (84%), Positives = 400/438 (91%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ  L  LAQLAE+YSK++VVQGGYI+SI  VYYTVT LS+YVCLGDFVVH+GK SDNLG
Sbjct: 1   MQNKLARLAQLAENYSKSIVVQGGYINSIMPVYYTVTGLSKYVCLGDFVVHRGKYSDNLG 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           QVIRI+ D++Y+CPVGI + I+LGDLVF  G FRISPS CWCGRV+NALGKPIDGD SL 
Sbjct: 61  QVIRIDHDVLYVCPVGIDKTITLGDLVFRQGPFRISPSECWCGRVLNALGKPIDGDFSLK 120

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G  SM+I+ K+P  MNRQRVEKGFKTGIRVIDIFTPLC+GQRIG+FAGSGIGKSTLLSM
Sbjct: 121 TGHFSMDIIGKIPSVMNRQRVEKGFKTGIRVIDIFTPLCYGQRIGIFAGSGIGKSTLLSM 180

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           FA+SDCFDKV+ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA T
Sbjct: 181 FAKSDCFDKVVISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAFT 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF SKGDNVLLILDSITRFAH+IREI+ NSGELPV RGYP SVFSELPRLLER GP 
Sbjct: 241 IAEYFCSKGDNVLLILDSITRFAHAIREISMNSGELPVTRGYPASVFSELPRLLERAGPR 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           EKEKG+ITA+ISVLVDGDNHNDPIADSVRSILDGH+VL RSLAEEGRYPPVDPLASVSRL
Sbjct: 301 EKEKGSITAIISVLVDGDNHNDPIADSVRSILDGHVVLKRSLAEEGRYPPVDPLASVSRL 360

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A KAWS+DE+KLV+SL +LIH+FEETRDIRLIGGYRPGVD+ LDKAV QVPIIYDFLKQS
Sbjct: 361 AYKAWSSDEEKLVASLKNLIHQFEETRDIRLIGGYRPGVDINLDKAVRQVPIIYDFLKQS 420

Query: 421 PSDLSSEDVFQEITKKLQ 438
           PSDL  +DVF EITKKLQ
Sbjct: 421 PSDLLLKDVFLEITKKLQ 438


>gi|222084860|ref|YP_002543389.1| H(+)-transporting ATP synthase [Agrobacterium radiobacter K84]
 gi|221722308|gb|ACM25464.1| H(+)-transporting ATP synthase [Agrobacterium radiobacter K84]
          Length = 462

 Score =  588 bits (1517), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 277/440 (62%), Positives = 343/440 (77%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  +A LAE Y  ++N V  GG++ +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPRLPHMAALAEHYAMTENAVAHGGHVRTIAAGHYTVAGLSRHVRLGEFVAHRSATGVH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  ++ Y+CP+  GE I + D V   G FRI+PS  WCGR IN+LG+PIDG   
Sbjct: 71  LGEVVRVEPELTYVCPIEPGEPIGIHDTVIRKGAFRIAPSESWCGRTINSLGEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 LTAGTQPRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG +++KSV VVATSDESP+LRKMAPL+A
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGTHMQKSVAVVATSDESPMLRKMAPLSA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  +GDNVLLI+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 ITIAEHFRDQGDNVLLIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLASVS
Sbjct: 311 PGPEGTGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASVS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  L+HR+EETRD+RLIGGYR G D  LD AV QVPIIY+ LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKALVHRYEETRDLRLIGGYRQGADADLDIAVRQVPIIYEILK 430

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q+P +  S D F ++   L+
Sbjct: 431 QTPGERPSADAFTDLATALK 450


>gi|227820853|ref|YP_002824823.1| flagellum-specific ATP synthase [Sinorhizobium fredii NGR234]
 gi|227339852|gb|ACP24070.1| flagellum-specific ATP synthase [Sinorhizobium fredii NGR234]
          Length = 466

 Score =  587 bits (1512), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 278/437 (63%), Positives = 344/437 (78%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+   V    GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDVSIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  D V +CP+  G+ I + D V   G FRI+P+  WCGR INAL +PIDG   L +
Sbjct: 74  VVRVEPDRVVVCPIEPGDPIGIHDTVIRKGAFRIAPTDNWCGRTINALAEPIDGRGPLMQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GFKTG+R +DIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDMRRSISNTAPPSMTRRRVEQGFKTGVRAVDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLAKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPP+DPLAS+SRLA
Sbjct: 314 EGTGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPIDPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYR G D  LD A+ QVP+IYD LKQ+P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRAGGDPDLDMAIKQVPVIYDVLKQTP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            + S  D F ++   L+
Sbjct: 434 GERSVADAFTDLANALK 450


>gi|15887903|ref|NP_353584.1| flagellum-specific ATP synthase [Agrobacterium tumefaciens str.
           C58]
 gi|6225361|sp|O34171|FLII_AGRT5 RecName: Full=Flagellum-specific ATP synthase
 gi|2459709|gb|AAB71785.1| FliI [Agrobacterium tumefaciens]
 gi|15155495|gb|AAK86369.1| flagellum-specific ATP synthase [Agrobacterium tumefaciens str.
           C58]
          Length = 473

 Score =  583 bits (1502), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/440 (62%), Positives = 343/440 (77%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA LA  Y+  +  V  GG++ +I + +YTV+ LS++V LG+FV H+     +
Sbjct: 18  ISPKLAQLASLAGHYADPEFSVAHGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIH 77

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  DI Y+CP+  GE I + D V   G FR+SP   WCGR INALG+PIDG   
Sbjct: 78  LGEVVRVEPDICYVCPIEPGEPIGIHDTVIRKGAFRVSPDESWCGRTINALGEPIDGQGP 137

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G +   I +  PP+M R+RVE  FKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 138 LASGIVRRSISNNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 197

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM A++D FDKV+I+LVGERGREVREFIED +GDN+ KSV VVATSDESP+LRKMAPL+A
Sbjct: 198 SMLAKADAFDKVVIALVGERGREVREFIEDTMGDNMSKSVAVVATSDESPMLRKMAPLSA 257

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  +GDNVLLI+DS+TRFAH+IRE+A  SGE PVARGYP SVF+ELPRLLER G
Sbjct: 258 VTIAEHFRDQGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAG 317

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA++S+LVDGDNHNDPIADS R ILDGHIVL+RSLAEEGRYPP++PLAS+S
Sbjct: 318 PGAEGTGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASIS 377

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  L+HRFEETRD+RLIGGYRPG D  LD AV QVPIIY+ LK
Sbjct: 378 RLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLK 437

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q P + +++D + ++   L+
Sbjct: 438 QLPDEPAAQDAYADLATALR 457


>gi|325291944|ref|YP_004277808.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3]
 gi|325059797|gb|ADY63488.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3]
          Length = 468

 Score =  582 bits (1499), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/440 (62%), Positives = 342/440 (77%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA LA  Y+  +  V  GG++ +I + +YTV+ LS++V LG+FV H+     +
Sbjct: 13  ISPKLAQLASLAGHYADPEFSVAPGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIH 72

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  DI Y+CP+  GE I + D V   G FR++P   WCGR INALG+PIDG   
Sbjct: 73  LGEVVRVEPDICYVCPIEPGEPIGIHDTVIRKGAFRVAPDDSWCGRTINALGEPIDGKGP 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G     I S  PP+M R+RVE  FKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 133 LASGTERRPISSNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM A++D FDKV+I LVGERGREVREFIED +G+N+ KSV VVATSDESP+LRKMAPL+A
Sbjct: 193 SMLAKADAFDKVVIGLVGERGREVREFIEDTMGENMGKSVAVVATSDESPMLRKMAPLSA 252

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAEYF  +GDNVLLI+DS+TRFAH+IRE+A  SGE PVARGYP SVF+ELPRLLER G
Sbjct: 253 VTIAEYFRDRGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAG 312

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA++S+LVDGDNHNDPIADS R ILDGHIVL+RSLAEEGRYPP++PLAS+S
Sbjct: 313 PGAEGSGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASIS 372

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  L+HRFEETRD+RLIGGYRPG D  LD AV QVPIIY+ LK
Sbjct: 373 RLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLK 432

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q P++ +++D + ++   L+
Sbjct: 433 QLPNEPAAQDAYADLATALR 452


>gi|209547923|ref|YP_002279840.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533679|gb|ACI53614.1| flagellar protein export ATPase FliI [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 465

 Score =  578 bits (1491), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/432 (64%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L E Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLAHLAGLVERYASPEFSVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  D++Y+CP+  GE I + D V   G FRISPS  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPDLIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 IAEGLDRRSISNTAPPSMTRKRVEAGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 VTIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           QSP D  S D F
Sbjct: 431 QSPGDRDSPDAF 442


>gi|15964410|ref|NP_384763.1| flagellum-specific ATP synthase [Sinorhizobium meliloti 1021]
 gi|307311552|ref|ZP_07591193.1| ATPase, FliI/YscN family [Sinorhizobium meliloti BL225C]
 gi|17380374|sp|O54249|FLII_RHIME RecName: Full=Flagellum-specific ATP synthase
 gi|15073587|emb|CAC45229.1| Flagellum-specific ATP synthase [Sinorhizobium meliloti 1021]
 gi|306899569|gb|EFN30198.1| ATPase, FliI/YscN family [Sinorhizobium meliloti BL225C]
          Length = 467

 Score =  575 bits (1481), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/437 (63%), Positives = 346/437 (79%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  + V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PIDG  +L +
Sbjct: 74  VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLSKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA
Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD LKQ P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            +  + D F ++   L+
Sbjct: 434 GERPAFDAFTDLANALK 450


>gi|2916791|emb|CAA11957.1| flagellar export apparatus protein [Sinorhizobium meliloti]
          Length = 467

 Score =  575 bits (1481), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/437 (63%), Positives = 346/437 (79%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  + V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PIDG  +L +
Sbjct: 74  VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLSKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA
Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD LKQ P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            +  + D F ++   L+
Sbjct: 434 GERPAFDAFTDLANALK 450


>gi|327193032|gb|EGE59944.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CNPAF512]
          Length = 464

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 276/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+  +  +
Sbjct: 10  LSPTLAHLAGLVDQYASPDFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSASGVH 69

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRISPS  WCGR IN+L +PIDG   
Sbjct: 70  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTINSLCEPIDGQGP 129

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M RQRV  GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 130 IVEGLDRRSISNTAPPSMTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 189

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 190 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 249

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 250 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 309

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 310 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 370 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 429

Query: 419 QSPSDLSSEDVF 430
           Q+P D  S D F
Sbjct: 430 QAPGDRESVDAF 441


>gi|190890358|ref|YP_001976900.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CIAT 652]
 gi|190695637|gb|ACE89722.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CIAT 652]
          Length = 464

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 275/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+  +  +
Sbjct: 10  LSPTLAHLAGLVDQYASPDFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSASGVH 69

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRISPS  WCGR +N+L +PIDG   
Sbjct: 70  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGQGP 129

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M RQRV  GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 130 IVEGLDRRSISNTAPPSMTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 189

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 190 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 249

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 250 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 309

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 310 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 370 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 429

Query: 419 QSPSDLSSEDVF 430
           Q+P D  S D F
Sbjct: 430 QAPGDRESVDAF 441


>gi|307318907|ref|ZP_07598338.1| ATPase, FliI/YscN family [Sinorhizobium meliloti AK83]
 gi|306895321|gb|EFN26076.1| ATPase, FliI/YscN family [Sinorhizobium meliloti AK83]
          Length = 467

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 275/437 (62%), Positives = 345/437 (78%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  + V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PIDG  +L +
Sbjct: 74  VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LG NL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGANLSKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA
Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD LKQ P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            +  + D F ++   L+
Sbjct: 434 GERPAFDAFTDLANALK 450


>gi|241203101|ref|YP_002974197.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856991|gb|ACS54658.1| ATPase, FliI/YscN family [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 466

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLAHLAGLVDRYASPEFAVAHGGRVQTIAAGHYTVHGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRI+P+  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRIAPTDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 IAEGLDRRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 VTIAEHFRDKGENVLFIIDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+R+IGGYR G D  LD A+ QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRMIGGYRQGADPDLDMAIKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           QSP D  S D F
Sbjct: 431 QSPGDRDSLDAF 442


>gi|86356307|ref|YP_468199.1| flagellum-specific ATP synthase [Rhizobium etli CFN 42]
 gi|86280409|gb|ABC89472.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CFN 42]
          Length = 465

 Score =  572 bits (1473), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 275/432 (63%), Positives = 333/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLVHLAGLVDRYASPEFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  D++Y+CP+  GE I + D V   G FRISPS  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPDLIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +  G     I +  PP+M RQRV  GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 IAAGLDRRSISNTAPPSMTRQRVATGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG ++KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSDMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           Q+P D  S D F
Sbjct: 431 QAPGDRESVDAF 442


>gi|116250477|ref|YP_766315.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255125|emb|CAK06199.1| putative flagellum-specific ATP synthase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 466

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  L+ L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLAHLSDLVDRYASPEFAVAHGGRVQTIAAGHYTVHGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRISP+  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPTDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 ITEGLDRRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 VTIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+R+IGGYR G D  LD A+ QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRMIGGYRQGADPDLDMAIKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           QSP D  S D F
Sbjct: 431 QSPGDRDSLDAF 442


>gi|222147566|ref|YP_002548523.1| flagellum-specific ATP synthase [Agrobacterium vitis S4]
 gi|221734554|gb|ACM35517.1| flagellum-specific ATP synthase [Agrobacterium vitis S4]
          Length = 464

 Score =  568 bits (1465), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 263/437 (60%), Positives = 342/437 (78%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
            L+ +A +A+ Y+ +   V  GG++ +I + +YTVT LS+++ LGDFV H+     +LG+
Sbjct: 14  QLDAMAAIAKRYATSDYSVAHGGHVRTIAAGHYTVTGLSRHLHLGDFVAHRSPTGIHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  D+ Y+CP+  GE I++GD V   G FR++    WCGR +NALG PIDG   +  
Sbjct: 74  VVRVEPDLAYVCPIEPGEPIAIGDTVIRKGAFRVAAQDSWCGRTLNALGDPIDGLGPVMP 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G +   I +  P +M R+RVE GF+TG++ +DIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GLVRRSIANTAPSSMGRKRVETGFRTGVKAVDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           A++D FDKV+I+LVGERGREVREFIED LGDN+ K+V +VATSDESP+LRKMAPLTA+T+
Sbjct: 194 AKADAFDKVVIALVGERGREVREFIEDTLGDNMAKTVAIVATSDESPMLRKMAPLTAITV 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +GDNVL I DSITRFAH+IRE+AT +GE P+ARG+P SVF+ELP+LLER GP E
Sbjct: 254 AEHFRDQGDNVLFIADSITRFAHAIREVATAAGEPPIARGFPASVFTELPKLLERAGPGE 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDPIAD  R ILDGHIVL+RSLAEEGRYPP++PLAS+SRLA
Sbjct: 314 EGTGTITAIISILVDGDNHNDPIADCTRGILDGHIVLDRSLAEEGRYPPINPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD A+ QVPI+Y+ LKQ+P
Sbjct: 374 RKAWTPDQEKLVSRLKTLIHRFEETRDLRLIGGYRAGSDPDLDMAIKQVPILYEVLKQTP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
           SD +  D + ++   L+
Sbjct: 434 SDRAVVDAYADLAHALK 450


>gi|150395480|ref|YP_001325947.1| flagellum-specific ATP synthase [Sinorhizobium medicae WSM419]
 gi|150026995|gb|ABR59112.1| ATPase, FliI/YscN family [Sinorhizobium medicae WSM419]
          Length = 467

 Score =  558 bits (1438), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/430 (62%), Positives = 337/430 (78%), Gaps = 2/430 (0%)

Query: 11  LAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+V+R+  +
Sbjct: 21  LVERYANPEFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGEVVRVEPE 80

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
            V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PID    L +GD+   I
Sbjct: 81  RVVVCPIEPGDPIGIHDIVIRKGAFRIAPTDKWCGRTINALAEPIDSLGVLLQGDVRRSI 140

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM AR+D FD
Sbjct: 141 ANVAPPSMTRKRVEHGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFD 200

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           KV+I+LVGERGREVREFIED LG NL KSV VVATSDESP+LRKMAPLTAVTIAE++  +
Sbjct: 201 KVVIALVGERGREVREFIEDTLGSNLSKSVAVVATSDESPMLRKMAPLTAVTIAEHYRDQ 260

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           GDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  +  G IT
Sbjct: 261 GDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGAEGTGTIT 320

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+IS+LVDGDNHNDP+ADS R ILDGHIVL RSLAEEGRYPPV+PL+S+SRLA KAW+ D
Sbjct: 321 AIISILVDGDNHNDPVADSARGILDGHIVLERSLAEEGRYPPVNPLSSISRLARKAWTPD 380

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++KLV+ L  LIHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD L Q+P +  + D
Sbjct: 381 QEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIRQVPVIYDVLMQTPGERPAFD 440

Query: 429 VFQEITKKLQ 438
            F ++   L+
Sbjct: 441 AFTDLANALK 450


>gi|163758010|ref|ZP_02165098.1| flagellum-specific ATP synthase [Hoeflea phototrophica DFL-43]
 gi|162284299|gb|EDQ34582.1| flagellum-specific ATP synthase [Hoeflea phototrophica DFL-43]
          Length = 459

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 246/438 (56%), Positives = 323/438 (73%), Gaps = 5/438 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGY-----ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + LA LA +  +     GGY     ++ ++  +  V  LS++V +GDF+  +  +   L 
Sbjct: 5   QGLAVLAREVRRISRPHGGYDVSGIVTEVSPGHCVVAGLSRHVRIGDFISFRHDDGVKLA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+ +  D +  CPV    + ++G+ V+  G FR+SP   WCGR INALG+P+DG   L 
Sbjct: 65  EVVSLGPDQLIACPVDGAAQAAIGERVWRQGAFRLSPHHTWCGRTINALGEPVDGLGGLE 124

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G +S  +    P +M RQRV    +TGIRV+D+FTP+C GQR+G+FAGSG+GKSTLLSM
Sbjct: 125 HGTVSRPVTGAPPASMLRQRVNAPLRTGIRVVDVFTPICRGQRLGIFAGSGVGKSTLLSM 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           FA++  FD+ +I+LVGERGREVREFIED LG+N+KK+V VVATSDESP+LRK+APLTAVT
Sbjct: 185 FAKAADFDRAVIALVGERGREVREFIEDTLGENMKKTVAVVATSDESPMLRKLAPLTAVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +G+NVLLI+DS+TRFAH++REI   +GE PVARGYP SVF+ LP LLER GP 
Sbjct: 245 VAEHFRDQGENVLLIVDSLTRFAHALREIGMAAGEPPVARGYPASVFTALPGLLERAGPG 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G ITA++S+LVDGDNHNDP+ADS R ILDGH+VL+R+LA+EGRYPPV+PL S+SRL
Sbjct: 305 PKGAGAITAIVSILVDGDNHNDPVADSARGILDGHLVLDRALADEGRYPPVNPLTSISRL 364

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A KAW  DE+KLV  L  LIHR+EETRD+RLIGGYRPG D  LD A+ Q P+IYD L+Q+
Sbjct: 365 ARKAWRGDEEKLVMRLKALIHRYEETRDLRLIGGYRPGTDAELDMAIKQAPVIYDSLRQN 424

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P    S D F E+ + ++
Sbjct: 425 PDQPPSADAFAELAEAMK 442


>gi|260466624|ref|ZP_05812812.1| ATPase, FliI/YscN family [Mesorhizobium opportunistum WSM2075]
 gi|259029630|gb|EEW30918.1| ATPase, FliI/YscN family [Mesorhizobium opportunistum WSM2075]
          Length = 466

 Score =  494 bits (1273), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/420 (55%), Positives = 312/420 (74%), Gaps = 1/420 (0%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           LV +GG ++ +T  +Y V  LS +  LGD V  +G      G++++I+ D V + P    
Sbjct: 39  LVKRGGLVTEVTPTHYKVRGLSDFARLGDIVEQRGLAGARRGEIVKISRDEVVVAPFERS 98

Query: 79  EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  +GD VF  G   ++P   W GR I+AL + IDG   L +GD  M   +  P AM R
Sbjct: 99  ADAGIGDAVFRRGPLAVAPHGSWRGRTIDALTRAIDGGPPLVRGD-DMAASATTPGAMAR 157

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           QRV   F TG++VIDIFTPLC GQR+GVFAGSG+GKSTLL+M A +D FD V+++L+GER
Sbjct: 158 QRVGTAFMTGVKVIDIFTPLCLGQRLGVFAGSGVGKSTLLAMLAGADAFDTVVVALIGER 217

Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           GREVREF+ED +GD++ K+V VVATSDES ++R+ AP TA+ +AE+F  +G  VLL+LDS
Sbjct: 218 GREVREFLEDTIGDSMAKTVAVVATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLVLDS 277

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP  + KG+ITA+ISVLVDGD
Sbjct: 278 ITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGAEGKGSITAIISVLVDGD 337

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA KAWS +++ LV+ L  
Sbjct: 338 DHNDPVADSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISRLAGKAWSLEQRALVTRLKS 397

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +I RFE+TRDIRL+G Y+ GVD  LD AV QVP+IY+ L QSP D  S D F ++ + L+
Sbjct: 398 MISRFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQSPRDRPSTDPFSDLARHLK 457


>gi|13472571|ref|NP_104138.1| flagellum-specific ATP synthase [Mesorhizobium loti MAFF303099]
 gi|14023317|dbj|BAB49924.1| flagella-specific ATPase; FliI [Mesorhizobium loti MAFF303099]
          Length = 466

 Score =  492 bits (1266), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 232/423 (54%), Positives = 312/423 (73%), Gaps = 1/423 (0%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +  LV +GG ++ +T  +Y V  LS +  LGD V  +G+     G++++I+ D V + P 
Sbjct: 36  TDGLVKRGGLVTEVTQTHYKVRGLSDFARLGDMVEQRGQAGSRRGEIVKISRDEVVVAPF 95

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  +GD VF  G   + P   W GR I+AL + IDG   L +G+  +   +  P A
Sbjct: 96  ERSADAGIGDAVFRRGPLAVGPHNSWRGRTIDALTRAIDGGPPLIRGE-DLSGGATTPGA 154

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M RQRV   F TG++VIDIFTPLC GQR+GVFAGSG+GKSTLL+M A +D FD V+++L+
Sbjct: 155 MARQRVGTAFMTGVKVIDIFTPLCFGQRMGVFAGSGVGKSTLLAMLAGADAFDTVVVALI 214

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGREVREF+ED +GD++ K+V VVATSDES ++R+ AP TA+ +AE+F  +G  VLL+
Sbjct: 215 GERGREVREFLEDTIGDSMAKTVAVVATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLV 274

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           LDSITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP  + KG+ITA+ISVLV
Sbjct: 275 LDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGAEGKGSITAIISVLV 334

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA KAWS +++ LV+ 
Sbjct: 335 DGDDHNDPVADSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISRLAGKAWSVEQRALVTR 394

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  +I RFE+TRDIRL+G Y+ G D  LD AV QVP+IY+ L QSP D  S D F ++ +
Sbjct: 395 LKSMISRFEDTRDIRLLGAYQGGADAELDIAVRQVPLIYEALTQSPRDRPSADPFSDLAR 454

Query: 436 KLQ 438
            L+
Sbjct: 455 HLK 457


>gi|319781686|ref|YP_004141162.1| ATPase, FliI/YscN family [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167574|gb|ADV11112.1| ATPase, FliI/YscN family [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 467

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/423 (54%), Positives = 309/423 (73%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           ++ L+ +GG +  +T  +Y V  LS +  LGD V   G      G++++I  D   + P 
Sbjct: 36  AEALLKRGGRVIEVTPTHYKVHGLSSFARLGDIVEQPGHAGARRGEIVKIGRDEAVVAPF 95

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  +GD VF  G   ++P A W GR I+AL + IDG   L +GD +       P A
Sbjct: 96  ERSADSGIGDAVFRRGPLVVAPHASWRGRTIDALTRAIDGGPPLARGDDTSRGAQTTPGA 155

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M RQRV   F TG++VIDIFTPLC GQR+G+FAGSG+GKSTLL+M A +D FD V+++L+
Sbjct: 156 MARQRVGTAFMTGVKVIDIFTPLCFGQRLGIFAGSGVGKSTLLAMLAGADAFDTVVVALI 215

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGREVREF+ED +GD++ K++ VVATSDES ++R+ AP TA+ +AE+F  +G  VLL+
Sbjct: 216 GERGREVREFLEDTIGDSMAKTIAVVATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLV 275

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           LDSITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP  + KG+ITA+ISVLV
Sbjct: 276 LDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGTEGKGSITAIISVLV 335

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA KAWS +++ LV+ 
Sbjct: 336 DGDDHNDPVADSVRGILDGHVVLDRTIAEQGRYPPVNPLSSISRLAGKAWSVEQRALVTR 395

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  +I RFE+TRDIRL+G Y+ GVD  LD AV QVP+IY+ L Q P D  S D F ++ +
Sbjct: 396 LKSMISRFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQGPKDRPSADPFSDLAR 455

Query: 436 KLQ 438
            L+
Sbjct: 456 HLK 458


>gi|110632661|ref|YP_672869.1| flagellum-specific ATP synthase [Mesorhizobium sp. BNC1]
 gi|110283645|gb|ABG61704.1| ATPase, FliI/YscN family [Chelativorans sp. BNC1]
          Length = 465

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/424 (54%), Positives = 308/424 (72%), Gaps = 2/424 (0%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           + +V  GG IS +T +YY V  LS+   LG  + ++   S+  G+V+RI+ D V + P  
Sbjct: 34  QRMVRHGGRISEVTPMYYRVRGLSKTARLGQIISYRSHGSEYRGEVVRISEDDVIVAPFE 93

Query: 77  IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPA 135
              E SLG  VF  G   I P A W GRVI+AL + +D   +L +        M + P A
Sbjct: 94  HSAEASLGQAVFATGTLEIRPHASWRGRVIDALARALDDGPALIRSAPQGPAAMPRTPAA 153

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQRV + F TG+RV+D+F PLC GQRIG+FAGSG+GKSTLL+M AR++ FD V++++V
Sbjct: 154 LRRQRVAEPFLTGVRVVDLFAPLCLGQRIGIFAGSGVGKSTLLAMLARAEAFDTVVVAMV 213

Query: 196 GERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+ED LG+  +KK+V VVATSDES ++R+ A  TA+ +AE+F   G+ VLL
Sbjct: 214 GERGREVREFLEDTLGEAGMKKTVAVVATSDESAMMRRRAADTAMRVAEHFRDAGEKVLL 273

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           +LDSITR+AH+ RE+AT +GE PVARGYP SVF++LPRLLER GP E   G+ITAV SVL
Sbjct: 274 LLDSITRYAHATREVATGAGEPPVARGYPASVFTDLPRLLERAGPGETGHGSITAVFSVL 333

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+HNDP+AD VR ILDGH+VL+R++AE+GR+P V PLAS+SRLAD++W+ D K++V 
Sbjct: 334 VDGDDHNDPVADCVRGILDGHLVLDRAIAEQGRFPAVSPLASISRLADRSWTDDRKRVVQ 393

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L  +I RFEETRDIRL+GG++ G+D  LD AV QVP+IYD L+QSP D  + D F ++ 
Sbjct: 394 RLKAMIARFEETRDIRLLGGFQAGLDPELDLAVRQVPLIYDILRQSPKDPPAMDPFADLA 453

Query: 435 KKLQ 438
             L+
Sbjct: 454 AHLK 457


>gi|121602501|ref|YP_989404.1| flagellum-specific ATP synthase [Bartonella bacilliformis KC583]
 gi|120614678|gb|ABM45279.1| flagellum-specific ATP synthase [Bartonella bacilliformis KC583]
          Length = 537

 Score =  458 bits (1178), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 226/425 (53%), Positives = 300/425 (70%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYIC 73
           +YS + + QGG IS +     T   LSQ V LGD V  +       G++IR+N + V I 
Sbjct: 111 EYSSHSINQGGVISDVARGILTARGLSQSVFLGDTVCIECGTQTVRGEIIRVNEESVLIK 170

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           P        L   VF  G   ++P A WCGRV+NA G+ IDG  +L  G   M + +  P
Sbjct: 171 PYDETIVPVLKASVFPQGPLFVAPDASWCGRVVNAFGEAIDGKGALLLGSSPMAVEAHAP 230

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           PA+ R RV  G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM  ++D FDKV+++
Sbjct: 231 PALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMMQADHFDKVVLA 290

Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           L GERGREVR+ ++D L D L K V V+ATSDESP++R++AP+ A TIAEYFSS GDNVL
Sbjct: 291 LTGERGREVRDMLDDTLQDKLDKVVAVIATSDESPMMRRLAPIMATTIAEYFSSLGDNVL 350

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DSITR+A ++REIA ++ E PV+RG+P  VFSELPRLLER GP  K KG+IT V +V
Sbjct: 351 LVVDSITRYALAVREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGRKGKGSITGVYAV 410

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD  +S+SRLA  +W+ +++ LV
Sbjct: 411 LVDGDDHNDPIADAIRGILDGHIVLDRAIAAQGRFPAVDISSSISRLASHSWTGEQRILV 470

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            SL  +I R+EETRD+R +G YRPG D ILD+AVH VP IY  + Q+       + + E+
Sbjct: 471 QSLKEMIFRYEETRDLRAMGAYRPGTDHILDQAVHLVPSIYAAMNQNIDTPLVRNPYDEL 530

Query: 434 TKKLQ 438
            K L+
Sbjct: 531 AKLLK 535


>gi|182679723|ref|YP_001833869.1| flagellum-specific ATP synthase [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635606|gb|ACB96380.1| ATPase, FliI/YscN family [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 442

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/437 (51%), Positives = 308/437 (70%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
            L+ L Q  ++  ++  LV  GG ++ +T  + +V  LS ++ LGD +      S  LG+
Sbjct: 3   TLDRLGQKLDNARRDIKLVRIGGTVTEVTPAFISVAGLSSFIKLGDCIKFGEDGSSALGE 62

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+RI+     I        I LGD  +  G F+I P   W GRVINALG PIDG D+L  
Sbjct: 63  VVRIDQQNATIKIFDHASSIGLGDKAWRMGPFQICPDPSWKGRVINALGIPIDGGDALRL 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G+ S  I +  PPAM R RV K  +TG+RVID+FTPLC GQRIG+FAGSG+GKSTLL M 
Sbjct: 123 GEESQSIHAAPPPAMRRARVTKPMRTGVRVIDLFTPLCAGQRIGIFAGSGVGKSTLLGML 182

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           A S  FD V+I LVGERGREVREF+++ L D+L  +V +VAT DES ++R++AP TA+TI
Sbjct: 183 AGSREFDTVVIGLVGERGREVREFLDEVLADHLANAVTIVATGDESSLMRRLAPNTAMTI 242

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +G+NVLLI+DS+TRFAH+ R++A  +GE+ VARGY  SVF++LP+LLER GP  
Sbjct: 243 AEFFRDRGENVLLIVDSVTRFAHAARDVALAAGEMAVARGYAPSVFTDLPKLLERAGPGL 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+IT + SVLVDGD+HN+PIAD++R  LDGHIVL+R++A++GR+P V+ L S+SRLA
Sbjct: 303 DGSGSITGIFSVLVDGDDHNEPIADTIRGTLDGHIVLDRAIADQGRFPAVNILRSISRLA 362

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++ LV  +  LI R+E+TRD+RL+GGY+PG D  LD+A+  VP IY  ++Q+P
Sbjct: 363 QHVWTPEQQGLVLKIRGLIARYEDTRDLRLMGGYQPGSDGELDQAIALVPKIYQAMEQTP 422

Query: 422 SDLSSEDVFQEITKKLQ 438
              +S+D F+E+ + LQ
Sbjct: 423 KSPASQDAFRELAEILQ 439


>gi|319403956|emb|CBI77544.1| Flagellum-specific ATP synthase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 510

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/431 (52%), Positives = 299/431 (69%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
            A+   D+  +LV QGG IS +         LSQ V LGD V  + ++    G++IR+N 
Sbjct: 78  FAKHKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVSVECESQFLRGEIIRVNE 137

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           + V I P        L   VF  G   ++P   WCGR++NA G+ IDG   L  G  +M 
Sbjct: 138 ESVLIKPYDETVVPMLSASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGGLSSGPRNMA 197

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  PPA+ R RV  G +TGI+VIDIFTPLC GQRIGVF+GSG+GKSTLLSM  ++D F
Sbjct: 198 IETYAPPALKRARVGAGLRTGIKVIDIFTPLCFGQRIGVFSGSGVGKSTLLSMMMQADHF 257

Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           D V+++L GERGREVR+ ++D L D L K + V+AT DESP++R++AP+ A TIAEYFSS
Sbjct: 258 DTVVLALTGERGREVRDMLDDVLHDKLHKLIGVIATGDESPMMRRLAPIMATTIAEYFSS 317

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            GDNVLL++DS+TR+A + REIA  + E PV+RG+P  VFSELPRLLER GP  + KG+I
Sbjct: 318 LGDNVLLVVDSVTRYALATREIAITAHEPPVSRGFPPRVFSELPRLLERAGPGREGKGSI 377

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA   W+ 
Sbjct: 378 TGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHNWTP 437

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           ++  LV +L  +I R+EETRD+R +G YRPG D +LD+AV  VP IY  +KQSP      
Sbjct: 438 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPDMALIS 497

Query: 428 DVFQEITKKLQ 438
           D ++E+ K L+
Sbjct: 498 DPYEELAKLLK 508


>gi|319406972|emb|CBI80609.1| Flagellum-specific ATP synthase [Bartonella sp. 1-1C]
          Length = 510

 Score =  451 bits (1161), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/431 (52%), Positives = 299/431 (69%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
            A+   D+  +LV QGG IS +         LSQ V LGD V  + ++    G++IR+N 
Sbjct: 78  FAKHKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVSVECESQFLRGEIIRVNE 137

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           + V I P        L   VF  G   ++P   WCGR++NA G+ IDG   L  G  +M 
Sbjct: 138 ESVLIKPYDETVVPMLSASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGGLSSGPRNMA 197

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  PPA+ R RV  G +TGI+VIDIFTPLC GQRIGVF+GSG+GKSTLLSM  ++D F
Sbjct: 198 IETYAPPALKRARVGAGLRTGIKVIDIFTPLCFGQRIGVFSGSGVGKSTLLSMMMQADHF 257

Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           D V+++L GERGREVR+ ++D L D L K + V+AT DESP++R++AP+ A TIAEYFSS
Sbjct: 258 DTVVLALTGERGREVRDMLDDVLHDKLHKLIGVIATGDESPMMRRLAPIMATTIAEYFSS 317

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            GDNVLL++DS+TR+A + REIA  + E PV+RG+P  VFSELPRLLER GP  + KG+I
Sbjct: 318 LGDNVLLVVDSVTRYALATREIAITAHEPPVSRGFPPRVFSELPRLLERAGPGREGKGSI 377

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA   W+ 
Sbjct: 378 TGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHNWTP 437

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           ++  LV +L  +I R+EETRD+R +G YRPG D +LD+AV  VP IY  +KQSP      
Sbjct: 438 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPDMGLIS 497

Query: 428 DVFQEITKKLQ 438
           D ++E+ K L+
Sbjct: 498 DPYEELAKLLK 508


>gi|217977820|ref|YP_002361967.1| flagellum-specific ATP synthase [Methylocella silvestris BL2]
 gi|217503196|gb|ACK50605.1| ATPase, FliI/YscN family [Methylocella silvestris BL2]
          Length = 449

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/429 (52%), Positives = 300/429 (69%), Gaps = 2/429 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLD 68
           + +  ++ LV   G ++ ++  +  V  LS +V LG+ V    + + + N G+V+RI+  
Sbjct: 17  MTQAAAEPLVRVSGAVTELSPSHARVAGLSSFVKLGECVRFGPEAEGARNRGEVVRIDAQ 76

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
            V +     G   SLG+ VF  G  RI+P   W GRV+NA G PIDG   L +GD S  I
Sbjct: 77  GVIVKTFEAGALTSLGERVFRAGPLRIAPHPGWKGRVVNAFGAPIDGAGPLPQGDRSAMI 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P AM R RV    +TG+RVIDIFTPLC GQRIG+FAGSG+GKSTLL+M A S  FD
Sbjct: 137 DAPPPSAMRRARVAWPLRTGVRVIDIFTPLCAGQRIGIFAGSGVGKSTLLAMLAGSKDFD 196

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            V+++LVGERGREVREF++D L  N   SV VVAT DE+P +R++AP TA+ IAE+F  +
Sbjct: 197 TVVVALVGERGREVREFLDDALAANRPISVAVVATGDETPSMRRLAPRTAMAIAEFFRDR 256

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           GD VLLI+DS+TRFAH+ R++A  +GE PVARGY  SVFS+LP+LLER GP E+  G+IT
Sbjct: 257 GDRVLLIIDSVTRFAHAARDVALAAGEPPVARGYTPSVFSDLPKLLERAGPGEEGGGSIT 316

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            V SVLVDGD+HNDP+AD+VR  LDGHIVL+R++A++GR+P V+ LAS+SRLA  AW+A+
Sbjct: 317 GVFSVLVDGDDHNDPVADAVRGTLDGHIVLDRAIADQGRFPAVNVLASISRLAQIAWTAE 376

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++ LV  L  +I RFE++ D+RL+GGY+ G D  LD+AV   P IY  L+QSP    S D
Sbjct: 377 QRDLVVKLRGMIARFEDSSDLRLMGGYKAGQDADLDQAVALAPKIYKALQQSPQSTPSAD 436

Query: 429 VFQEITKKL 437
            F+E+ + L
Sbjct: 437 AFRELAQSL 445


>gi|158422270|ref|YP_001523562.1| flagellum-specific ATP synthase [Azorhizobium caulinodans ORS 571]
 gi|158329159|dbj|BAF86644.1| flagellum-specific ATP synthase [Azorhizobium caulinodans ORS 571]
          Length = 440

 Score =  449 bits (1156), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/416 (51%), Positives = 296/416 (71%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           GG +  +T  Y+ V+ +S Y+ LGD V         +G+V+R++     + P      + 
Sbjct: 24  GGIVREVTPTYFRVSGISSYLRLGDRVGIDQDGRTRIGEVVRVDEAGAAVKPFDERVPVG 83

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           +G + F  G   +SP   W GRVINALG P+DG+  L +G+  M + ++ PPAM RQR++
Sbjct: 84  MGSVAFRAGSLSLSPDRSWKGRVINALGVPLDGEGLLARGEHRMPMDAEPPPAMTRQRIQ 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           KG +TG+RVID+FTPLC GQR+G+FAGSG+GKSTLL+M ARS  FD V++ LVGERGREV
Sbjct: 144 KGIRTGVRVIDLFTPLCEGQRMGIFAGSGVGKSTLLAMLARSAVFDTVVVGLVGERGREV 203

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           REF+E  L  N  +SVVVV+TSDESP++R++AP +A+ +AEYF   G++VLLI+DS+TR+
Sbjct: 204 REFLEGPLASNRHRSVVVVSTSDESPMMRRLAPQSALAVAEYFRDLGESVLLIIDSVTRY 263

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           AH+ R++A  +GE  VARGY  SVFS LP+LLER GP  +  G ITAV SVLVDGD+HND
Sbjct: 264 AHAARDVALAAGEPAVARGYAPSVFSTLPKLLERAGPGTEGAGCITAVFSVLVDGDDHND 323

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+AD++R  LDGHIVL+R++A++GR+P V+ L S+SRLAD  W+ +E+ LV  L  ++ R
Sbjct: 324 PVADAIRGTLDGHIVLDRAIADQGRFPAVNVLGSISRLADHVWTPEERDLVRRLKSMVAR 383

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           FE+TRD+RL+GGY  G D  LD+AV  VP IY+ L+Q      S D F E+ + ++
Sbjct: 384 FEDTRDLRLMGGYHAGSDPELDQAVALVPKIYEALRQYSDSPPSLDPFGELAQAIR 439


>gi|90422599|ref|YP_530969.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB18]
 gi|90104613|gb|ABD86650.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18]
          Length = 443

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/433 (51%), Positives = 303/433 (69%), Gaps = 2/433 (0%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++   TL  L +D     V  GG +S +T  YY V  LS+YV LG+ +     N   LG
Sbjct: 4   LERLESTLVALRQDVPT--VRLGGVVSEVTPTYYRVAGLSRYVRLGELIGLDVDNQIQLG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI+   V   P        LG + +      +SP   W GRV+NALG+P+D    L 
Sbjct: 62  EVVRIDGTGVTAKPFDSHVAAGLGLVAYRLPPKTLSPHPSWKGRVVNALGEPLDDAGVLQ 121

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G+  M   +  PPAM+R RV+    TG+RV+D+FTPLC GQRIG+FAGSG+GK+TLLSM
Sbjct: 122 AGERVMSTDANPPPAMSRTRVQAPLHTGVRVVDLFTPLCIGQRIGIFAGSGVGKTTLLSM 181

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            A+S  FD V+ +LVGERGREVREF+E+ L  +  +++ VV+TSDESP++R++A  TA T
Sbjct: 182 LAQSSGFDTVVTALVGERGREVREFLEEALVHHRSRAITVVSTSDESPMMRRLAAKTATT 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G++VLLI+DS+TRFAH+ RE+A  +GE  +ARGY  SVFSELPRLLER GP 
Sbjct: 242 IAEYFRDRGESVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSELPRLLERSGPG 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+IT + +VLVDGD+HN+P+AD+VRS LDGHIVL+R +A++GRYP ++ LASVSRL
Sbjct: 302 LDGQGSITGIFAVLVDGDDHNEPVADTVRSTLDGHIVLDREVADQGRYPAINVLASVSRL 361

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   WS +E+ LV  L  +I RFE+TRD+RL+GGY+PG D  LD+AV  VP IY+ ++Q+
Sbjct: 362 AQHVWSPEERNLVRKLRAMIARFEDTRDLRLMGGYQPGRDNELDQAVQLVPKIYEVMQQA 421

Query: 421 PSDLSSEDVFQEI 433
           PSD +  + FQE+
Sbjct: 422 PSDPACGEPFQEL 434


>gi|319898632|ref|YP_004158725.1| flagellum-specific ATP synthase [Bartonella clarridgeiae 73]
 gi|319402596|emb|CBI76141.1| Flagellum-specific ATP synthase [Bartonella clarridgeiae 73]
          Length = 514

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/431 (51%), Positives = 298/431 (69%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
            A+  +DY   LV QGG IS +         LSQ V LGD V  + +     G++IR+N 
Sbjct: 80  FARRKDDYYSQLVSQGGIISDVARGTLVARGLSQSVLLGDTVSVECETQLLRGEIIRVNE 139

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           + V I P        L   VF  G   ++P   W GR++NA G+ IDG   L  G  +M 
Sbjct: 140 ESVLIKPYDETIVPVLSASVFPKGPLFVAPDRSWRGRIVNAFGEAIDGKGILSSGSQNMA 199

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  PPA+ R RV  G +TG++VIDIFTPLC GQR+G+F+GSG+GKSTLLSM  ++D F
Sbjct: 200 IETYAPPALKRARVGAGLRTGVKVIDIFTPLCFGQRVGIFSGSGVGKSTLLSMMMQADHF 259

Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           D VI++L GERGREVR+ ++D L D L K V V+AT DESP++R +AP+ A TIAEYFSS
Sbjct: 260 DTVILALTGERGREVRDMLDDTLQDKLHKLVGVIATGDESPMMRHLAPIMATTIAEYFSS 319

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            GDNVLL++DS+TR+A + REIA ++ E PV+RG+P  VFSELPRLLER GP  + KG+I
Sbjct: 320 LGDNVLLVVDSVTRYALAAREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGREGKGSI 379

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T V +VLVDGD+HNDPI+D++R ILDGHIVL+R++A +GR+P VD L+S+SRLA  +W+ 
Sbjct: 380 TGVYAVLVDGDDHNDPISDAIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHSWTP 439

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           ++  LV +L  +I R+EETRD+R +G YRPG D +LD+AV  VP IY  +KQSP      
Sbjct: 440 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPDVPLIS 499

Query: 428 DVFQEITKKLQ 438
           D ++E+ K L+
Sbjct: 500 DPYEELAKLLK 510


>gi|115523167|ref|YP_780078.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisA53]
 gi|115517114|gb|ABJ05098.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris BisA53]
          Length = 443

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/427 (51%), Positives = 301/427 (70%), Gaps = 2/427 (0%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           TLA L +D     V  GG +S +   +Y V  LS+ V LG+ +  +  N   +G+VIRI+
Sbjct: 10  TLASLHKDVPT--VRLGGTVSEVAPTHYRVAGLSRLVKLGELIGLEVDNQMQIGEVIRID 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
            + V   P        LG + +      +SP   W GRVINALG+P+DG   L  G+  M
Sbjct: 68  GNGVTAKPFESHVAAGLGLIAYRLPPKTLSPHPSWKGRVINALGQPLDGAGVLLAGEREM 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
              +  PPAM+R RV    +TG+RVID+F+P+C GQRIG+FAGSG+GK+TLLSM A+S  
Sbjct: 128 STDANPPPAMSRARVRAPLQTGVRVIDLFSPICVGQRIGIFAGSGVGKTTLLSMMAQSAG 187

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           FD V+ +LVGERGREVREF+E+ L  +  ++V VV+TSDESP++R++A  TA TIAEYF 
Sbjct: 188 FDTVVTALVGERGREVREFLEEALVHHKSRAVTVVSTSDESPMMRRLAAKTATTIAEYFR 247

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G++VLLI+DS+TRFAH+ RE+A  +GE  +ARGY  SVFSE+PRLLER GP    +G+
Sbjct: 248 DRGESVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSEIPRLLERSGPGIDGQGS 307

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLVDGD+HN+P+AD+VRS LDGHIVL+R +A++GRYP V+ L+SVSRLA   WS
Sbjct: 308 ITGIFAVLVDGDDHNEPVADTVRSTLDGHIVLDREVADQGRYPAVNVLSSVSRLAQHVWS 367

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +E+ LV  L  +I RFE+TRD+RL+GGY+PG D  LD+AV  VP IY+ ++Q+PSD   
Sbjct: 368 PEERNLVRKLRAMIARFEDTRDLRLMGGYQPGRDSELDQAVQLVPKIYEVMQQAPSDPGC 427

Query: 427 EDVFQEI 433
            + FQE+
Sbjct: 428 TEPFQEL 434


>gi|319409191|emb|CBI82835.1| Flagellum-specific ATP synthase [Bartonella schoenbuchensis R1]
          Length = 509

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/426 (52%), Positives = 297/426 (69%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           +D S  LV QGG IS +         LSQ V LGD V          G++I +N + V I
Sbjct: 82  DDPSSCLVNQGGVISDVARGTLVARGLSQSVLLGDTVCIDCDGQAVRGEIIHVNEENVLI 141

Query: 73  CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            P        L   VF  G   ++P   WCGRV+NALG+ IDG  +L  G  +M +   V
Sbjct: 142 KPYDETVVPVLMASVFPKGPLFVAPDRSWCGRVVNALGEAIDGKGALLSGPRNMAVEGDV 201

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           PPA+ R RV+KG +TG++VIDIFTPLC GQRIG+FAGSG+GKSTLLSM  ++D FD V++
Sbjct: 202 PPALKRARVKKGLRTGVKVIDIFTPLCFGQRIGIFAGSGVGKSTLLSMMMQADHFDTVVL 261

Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           +L GERGREVR+ ++D L + L K V V+AT DESP++R++AP+ A TIAEYFSS GDNV
Sbjct: 262 ALTGERGREVRDMLDDTLHNKLDKVVAVIATGDESPMMRRLAPIMATTIAEYFSSLGDNV 321

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A ++REIA ++ E PV+RG+P  VFSELPRLLER G   + KG+IT V +
Sbjct: 322 LLVVDSVTRYALAMREIAISAHEPPVSRGFPPRVFSELPRLLERAGSGREGKGSITGVYA 381

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+HNDPI+D++R ILDGHIVL+R++A +GR+P VD  AS+SRLA  +W+ +++ L
Sbjct: 382 VLVDGDDHNDPISDAIRGILDGHIVLDRAIAAQGRFPAVDIPASISRLAPHSWTDEQRIL 441

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           V +L  +I R+EETRD+R +G YR G D +LD+A+  VP IY  +KQSP      D + E
Sbjct: 442 VQNLKEMIFRYEETRDLRAMGAYRAGTDQVLDQAIFLVPSIYAAMKQSPDMPLVHDPYDE 501

Query: 433 ITKKLQ 438
           + K L+
Sbjct: 502 LAKLLK 507


>gi|319405397|emb|CBI79016.1| Flagellum-specific ATP synthase [Bartonella sp. AR 15-3]
          Length = 509

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/431 (50%), Positives = 298/431 (69%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
            A+   D+  +LV QGG IS +         LSQ V LGD V  + +     G++IR+N 
Sbjct: 77  FAKRKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVCIECETQLLRGEIIRVNE 136

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +   I P        L   VF  G   ++P   WCGR++NA G+ IDG   L  G  +M 
Sbjct: 137 ESALIKPYDETVVPILAASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGVLSSGPRNMA 196

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  PPA+ R RV  G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM  ++D F
Sbjct: 197 IEAYAPPALKRARVGAGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMMQADHF 256

Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           D V+++L GERGREVR+ ++D + D L K + V+AT DESP++R++AP+ A TIAEYFSS
Sbjct: 257 DTVVLALTGERGREVRDMLDDIVQDKLHKLIGVIATGDESPMMRRLAPIMATTIAEYFSS 316

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            GDNVLL++DSITR+A + REIA  + E PV+RG+P  VFSEL RLLER GP  + KG+I
Sbjct: 317 LGDNVLLVVDSITRYALAAREIAITAHEPPVSRGFPPRVFSELSRLLERAGPGRERKGSI 376

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA  +W+ 
Sbjct: 377 TGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHSWTP 436

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           ++  LV +L  +I R+EETRD+R +G YRPG+D +LD+AV  VP +Y  +KQ+P      
Sbjct: 437 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGIDHVLDQAVFLVPSVYTAIKQNPDMPLII 496

Query: 428 DVFQEITKKLQ 438
           D ++E+ + L+
Sbjct: 497 DPYEELARLLK 507


>gi|161511087|ref|NP_773525.2| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
          Length = 441

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/430 (49%), Positives = 294/430 (68%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           A L    S  L    G IS I   ++ V+ LS++V LG+ +         +G+V+RI+ +
Sbjct: 10  ALLELQQSTPLASVSGAISEIAPTHFRVSGLSRFVRLGELIGVNSGGKPQIGEVVRIDSE 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
            +   P        LG + +       +P   W GRVINALG P+DG   L  G  ++  
Sbjct: 70  GIIAKPFDRQFAGGLGSVAYRMPPLSFAPDPSWKGRVINALGAPLDGQGPLTPGSRAVSA 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P AM R RV K  +TG+RVID+F P+C GQR+G+FAGSG+GKSTLL+M ARS  FD
Sbjct: 130 EAEAPSAMKRARVHKPLRTGVRVIDLFAPICAGQRVGIFAGSGVGKSTLLAMLARSQGFD 189

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            V+++LVGERGREVREFIED LG N  ++V +V+T DESP++R++AP TA+ +AEYF  +
Sbjct: 190 TVVLALVGERGREVREFIEDVLGANRNRAVTIVSTGDESPMMRRLAPKTAMAVAEYFRDR 249

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G++VLL++DSITRFAH+ RE+A  +GE  VARGY  +VF++LPRLLER GP E+  G IT
Sbjct: 250 GESVLLVVDSITRFAHAAREVALAAGEPAVARGYAPTVFTDLPRLLERAGPGEEGSGTIT 309

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + SVLVDGD+HN+PIAD++RS LDGHIVL+R +A++ RYP VD LASVSRLA   W  +
Sbjct: 310 GIFSVLVDGDDHNEPIADTIRSTLDGHIVLSRHIADQARYPAVDVLASVSRLAHNVWDPE 369

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           E++LVS L  +I ++E+TRD+RL+GGY+ G D  LD+A+  VP IY  ++Q  S   S D
Sbjct: 370 ERELVSKLRTMIAKYEDTRDLRLMGGYQSGRDSGLDQAIDLVPRIYSAMRQDASAQPSAD 429

Query: 429 VFQEITKKLQ 438
            F+E+   L+
Sbjct: 430 PFRELRDMLK 439


>gi|90418401|ref|ZP_01226313.1| flagellum-specific ATP synthase FliI [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338073|gb|EAS51724.1| flagellum-specific ATP synthase FliI [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 457

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/415 (50%), Positives = 291/415 (70%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G+I  ++   + V  LS +V LGD +   G + D +G+V+RI    + + P        +
Sbjct: 23  GHIIDVSPQAFRVAGLSPFVRLGDRIACPGDDGDAIGEVVRIEQASLTVKPFANRFVRGV 82

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
                  G F +SPS  W GRV++A G+P DG   + +GD      +   PAM R R  K
Sbjct: 83  KAPARQIGPFMVSPSRSWKGRVLDAFGQPTDGKGPVSEGDDPRRADAPPLPAMQRGRTGK 142

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
              TG+R +DIFTPL  GQRIG+FAGSG+GKSTL+SM AR+  FD V+++LVGERGREVR
Sbjct: 143 PVATGVRALDIFTPLVRGQRIGIFAGSGVGKSTLMSMLARAKGFDTVVVALVGERGREVR 202

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           EF+E+ +  NL K V +VAT DESP++R++AP TA ++AEYF  +GD+VLLI+DS+TR A
Sbjct: 203 EFLEETMAGNLAKVVTIVATGDESPMMRRLAPRTATSVAEYFRDRGDSVLLIVDSVTRLA 262

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
           H+ R++A  +GE PVARGYP SVFSELP+LLER GP  +  G+IT + SVLVDGD+HNDP
Sbjct: 263 HAARDVALAAGEPPVARGYPPSVFSELPQLLERAGPGLEGSGSITGIFSVLVDGDDHNDP 322

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           IAD++R  LDGHIVL+R++AE+GR+P VD L S+SRLAD+AW+  E++LVS L  +I R+
Sbjct: 323 IADAIRGTLDGHIVLDRAIAEQGRFPAVDVLKSISRLADRAWNPQERELVSRLRSMISRY 382

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           E+TRD+RL+GGY+ G D  LD+AV  VP +Y+ L Q P +   +  F++++ +L+
Sbjct: 383 EDTRDLRLLGGYQRGSDQTLDQAVDLVPHVYEHLVQHPEEGPCKQPFEDLSARLK 437


>gi|153011529|ref|YP_001372743.1| flagellum-specific ATP synthase [Ochrobactrum anthropi ATCC 49188]
 gi|151563417|gb|ABS16914.1| ATPase, FliI/YscN family [Ochrobactrum anthropi ATCC 49188]
          Length = 452

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/438 (50%), Positives = 294/438 (67%), Gaps = 4/438 (0%)

Query: 5   LETLAQLAEDYS---KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           L  LA  A   S   K L   GG +S ++     V  LS+   LGD V    +   +L +
Sbjct: 7   LSRLAAFARQQSVAPKPLTGIGGTVSDVSRSAIAVRGLSRDAHLGDAVAIHAQGGQSLAE 66

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +IR+    V + P       SLG  VF  G  RI P+  W GRVINALG+ +DG  +L  
Sbjct: 67  IIRVADTQVLVKPFDDRIIPSLGAAVFEEGPMRIRPALEWRGRVINALGEAVDGKGALQP 126

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G   M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M 
Sbjct: 127 GTRPMASESLAPAALRRGRVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMM 186

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  I
Sbjct: 187 TRAADFDTVVLALTGERGREVREMLEETMAGHLDKTITVVATGDESPMMRRLAPNTATAI 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF   G NVLLI+DS+TRFAH+ RE+A  + E PV+RGYP SVFS+LPRLLER GP  
Sbjct: 247 AEYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVSRGYPPSVFSQLPRLLERAGPGI 306

Query: 302 KEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            E  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD   SVSRL
Sbjct: 307 TEAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPGSVSRL 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   W+ +++KLVS L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IYD L+QS
Sbjct: 367 AKHNWTPEQRKLVSQLRGMVARFEETRDLRAIGAYQKGHDGLLDQAVDLVPRIYDALQQS 426

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P    S+D + ++   L+
Sbjct: 427 PETGLSDDPYNDLAAALR 444


>gi|328545465|ref|YP_004305574.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [polymorphum gilvum SL003B-26A1]
 gi|326415206|gb|ADZ72269.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 440

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/415 (52%), Positives = 286/415 (68%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           GG ++ +T     +  LS+ VCLGD VV  GK  +   ++IR++   V + P     +I+
Sbjct: 24  GGRVTQVTPGSVRICGLSRSVCLGDLVVLSGKGGERRSEIIRLDEQDVLVKPFDSHVDIA 83

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           +G   F  G   I P   W GRVI+ALG P D    L  G  +M      P  + R R+ 
Sbjct: 84  IGARAFRKGSLTIHPHESWKGRVIDALGHPADDRGVLRPGPAAMLPDCDPPATLERARIR 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           K  +TG+RVID+FTPLC GQRIG+FAGSG+GKSTLL+M A S  FD V++ LVGERGREV
Sbjct: 144 KPVRTGVRVIDLFTPLCVGQRIGIFAGSGVGKSTLLAMLAGSGDFDTVVVGLVGERGREV 203

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           REF+ED LG+  ++SVVVVAT +ES ++R++AP TA+ +AEYF   G +VLLI+DS TRF
Sbjct: 204 REFVEDVLGEARERSVVVVATGNESAMMRRLAPKTAMGVAEYFRDLGQSVLLIIDSATRF 263

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           AH+ R++A  +GE PVARGY  SVFS+L RLLER GP  + KG IT + SVLVDGD+HND
Sbjct: 264 AHAARDVAMAAGEPPVARGYTPSVFSDLTRLLERAGPGGEGKGAITGIFSVLVDGDDHND 323

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+AD++R +LDGHIVL+RS+A+ GRYP VD L SVSRL+  AWSA+E++L+  L  +I R
Sbjct: 324 PVADTLRGVLDGHIVLDRSIADAGRYPAVDVLKSVSRLSQHAWSAEERELILRLKAMISR 383

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           FE+TRD+RL+GGY+PG D  LDKA   VP IY+ L+Q        D F ++ + L
Sbjct: 384 FEDTRDLRLMGGYQPGSDPALDKACTLVPRIYEALRQDARSAQVGDPFADLARAL 438


>gi|254699440|ref|ZP_05161268.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513]
 gi|256014919|ref|YP_003104928.1| flagellum-specific ATP synthase FliI [Brucella microti CCM 4915]
 gi|256059628|ref|ZP_05449825.1| flagellum-specific ATP synthase [Brucella neotomae 5K33]
 gi|256111962|ref|ZP_05452913.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str.
           Ether]
 gi|261323598|ref|ZP_05962795.1| flagellum-specific ATP synthase [Brucella neotomae 5K33]
 gi|261749891|ref|ZP_05993600.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513]
 gi|265993411|ref|ZP_06105968.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str.
           Ether]
 gi|255997579|gb|ACU49266.1| flagellum-specific ATP synthase FliI [Brucella microti CCM 4915]
 gi|261299578|gb|EEY03075.1| flagellum-specific ATP synthase [Brucella neotomae 5K33]
 gi|261739644|gb|EEY27570.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513]
 gi|262764281|gb|EEZ10313.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 453

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|163844324|ref|YP_001621979.1| flagellum-specific ATP synthase [Brucella suis ATCC 23445]
 gi|163675047|gb|ABY39157.1| ATPase FliI/YscN family [Brucella suis ATCC 23445]
          Length = 453

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-KGNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEGGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|300024617|ref|YP_003757228.1| ATPase, FliI/YscN family [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526438|gb|ADJ24907.1| ATPase, FliI/YscN family [Hyphomicrobium denitrificans ATCC 51888]
          Length = 456

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/415 (51%), Positives = 282/415 (67%), Gaps = 1/415 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ I+  Y  VT LS++V +GD V   G     L +V  I   ++ + P      I L
Sbjct: 31  GRVARISPTYIVVTGLSKFVSIGDAVSIAGIGGSVLAEVASIEAQVINVTPFIADHRIEL 90

Query: 84  GDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    G+  +SP   W GR +NALG PID    L  GD ++ I    P AM R R+ 
Sbjct: 91  GASVTALSGQLTLSPHESWLGRTLNALGHPIDDQGPLIAGDRAVPIQGSPPAAMRRSRLG 150

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +  KTG++ ID+FTP+C GQRIG+FAGSG+GKSTLL+M +R+   D  +++LVGER REV
Sbjct: 151 EQLKTGVKAIDLFTPICAGQRIGIFAGSGVGKSTLLAMLSRAPSSDVTVLALVGERSREV 210

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           R+F++D L  +  + V VVATSDESP++R++AP  A+ IAEY+  +G NVLLI+DS+TR+
Sbjct: 211 RDFLDDTLSASRDRVVSVVATSDESPMMRRLAPAAAMCIAEYYRDQGKNVLLIIDSLTRY 270

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           AH++RE+A  S E PVARGYP SVFS LPRLLER G  E+  G ITAV+SVLVDGD+HND
Sbjct: 271 AHAMRELALASDEPPVARGYPPSVFSALPRLLERAGTGEEGAGTITAVLSVLVDGDDHND 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PIAD+ R ILDGHIVL RS+A +GR P VDPLAS+SRLA K  +  + +  + L   I R
Sbjct: 331 PIADAARGILDGHIVLERSIASQGRLPAVDPLASLSRLAPKIRTKQQSQFTTQLIESISR 390

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           FE+TRD+R IGGYRPG DL LD+A+  VP +YD LKQ  ++   EDVF  + + L
Sbjct: 391 FEDTRDLRAIGGYRPGSDLTLDRALETVPRVYDALKQDLNETPVEDVFAFLAQTL 445


>gi|254559267|ref|YP_003066362.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
 gi|254266545|emb|CAX22309.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
          Length = 442

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/441 (48%), Positives = 297/441 (67%), Gaps = 3/441 (0%)

Query: 1   MQKN-LETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           M +N +E L Q  E   ++L  V   G +  +T+    V  +S +V LGD +        
Sbjct: 1   MTRNAIERLEQAMEAGRRDLPLVRIAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRT 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
            +G+V+RI+     + P     E  +G L    G  ++ P   W GRVI+ALG+P+DG  
Sbjct: 61  QVGEVVRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L +G  S+ + +  P AM R RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTL
Sbjct: 121 PLAEGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTL 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           L+M A +  FD V+++LVGERGREVREF+E  +     ++V+VV+T DESP++R+ AP  
Sbjct: 181 LAMLAGAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKV 240

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A+ +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER 
Sbjct: 241 ALAVAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERA 300

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP  +  G IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+
Sbjct: 301 GPGAEGTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSI 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRLA + W+ D+++LV  L  ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L
Sbjct: 361 SRLAGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEAL 420

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           +Q P    S D F E+ + L+
Sbjct: 421 RQEPGQPPSRDAFLELAQSLR 441


>gi|161620215|ref|YP_001594101.1| flagellum-specific ATP synthase [Brucella canis ATCC 23365]
 gi|254702557|ref|ZP_05164385.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686]
 gi|260568535|ref|ZP_05839004.1| flagellum-specific ATP synthase [Brucella suis bv. 4 str. 40]
 gi|261753135|ref|ZP_05996844.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686]
 gi|161337026|gb|ABX63330.1| ATPase FliI/YscN family [Brucella canis ATCC 23365]
 gi|260155200|gb|EEW90281.1| flagellum-specific ATP synthase [Brucella suis bv. 4 str. 40]
 gi|261742888|gb|EEY30814.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686]
          Length = 453

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKLGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|218528726|ref|YP_002419542.1| flagellum-specific ATP synthase [Methylobacterium chloromethanicum
           CM4]
 gi|218521029|gb|ACK81614.1| ATPase, FliI/YscN family [Methylobacterium chloromethanicum CM4]
          Length = 442

 Score =  432 bits (1110), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/436 (48%), Positives = 294/436 (67%), Gaps = 2/436 (0%)

Query: 5   LETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           +E L Q  E   ++L  V   G +  +T+    V  +S +V LGD +         +G+V
Sbjct: 6   IERLEQAMEAGRRDLPLVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVGEV 65

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +RI+     + P     E  +G L    G  ++ P   W GRVI+ALG+P+DG   L +G
Sbjct: 66  VRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLAEG 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             S+ + +  P AM R RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A
Sbjct: 126 PASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLA 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
            +  FD V+++LVGERGREVREF+E  +     ++V+VV+T DESP++R+ AP  A+ +A
Sbjct: 186 GAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALAVA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP  +
Sbjct: 246 ESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAE 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+SRLA 
Sbjct: 306 GTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAG 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           + W+ D+++LV  L  ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q P 
Sbjct: 366 EVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPG 425

Query: 423 DLSSEDVFQEITKKLQ 438
              S D F E+ + L+
Sbjct: 426 QPPSRDAFLELAQSLR 441


>gi|188579924|ref|YP_001923369.1| flagellum-specific ATP synthase [Methylobacterium populi BJ001]
 gi|179343422|gb|ACB78834.1| ATPase, FliI/YscN family [Methylobacterium populi BJ001]
          Length = 442

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/422 (49%), Positives = 291/422 (68%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           + LV  GG +  +T+    V  +S +V LGD +         +G+V+RI+     + P  
Sbjct: 20  RPLVRVGGPVREVTASAARVAGVSAFVRLGDRMGFSADGRVQVGEVVRIDSAGATVKPFE 79

Query: 77  IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              E  +G L    G  ++ P   W GRVI+ALG+P+DG   L +G  S+ + +  P AM
Sbjct: 80  SRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLAEGPDSVPLDADPPAAM 139

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R RV     TG+R +D+FTPLC GQRIG+FAGSG+GKSTLL+M A ++ FD V+++LVG
Sbjct: 140 TRARVRTPLPTGVRAVDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGAEGFDSVVVALVG 199

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGREVREF+E  +  + +++V+VV+T DESP++R+ AP  A+ +AE F  +G++VLLI+
Sbjct: 200 ERGREVREFLEGPIAASRERAVIVVSTGDESPMMRRQAPKVALAVAECFRDRGESVLLIV 259

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP  +  G IT + SVLVD
Sbjct: 260 DSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAEGSGTITGIFSVLVD 319

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP +D L S+SRLA + W+ D+++LV  L
Sbjct: 320 GDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIDLLGSISRLAGEVWTGDQRELVRKL 379

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q P    S D F E+ + 
Sbjct: 380 KSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPGQPPSRDAFLELAQS 439

Query: 437 LQ 438
           L+
Sbjct: 440 LR 441


>gi|306846297|ref|ZP_07478858.1| ATPase FliI/YscN family [Brucella sp. BO1]
 gi|306273292|gb|EFM55161.1| ATPase FliI/YscN family [Brucella sp. BO1]
          Length = 453

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD   SVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPVSVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|225628604|ref|ZP_03786638.1| ATPase FliI/YscN family protein [Brucella ceti str. Cudo]
 gi|254711395|ref|ZP_05173206.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94]
 gi|254711994|ref|ZP_05173805.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1]
 gi|254715064|ref|ZP_05176875.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1]
 gi|256029975|ref|ZP_05443589.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1]
 gi|256158140|ref|ZP_05456056.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1]
 gi|256252909|ref|ZP_05458445.1| flagellum-specific ATP synthase [Brucella ceti B1/94]
 gi|261216771|ref|ZP_05931052.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1]
 gi|261219998|ref|ZP_05934279.1| flagellum-specific ATP synthase [Brucella ceti B1/94]
 gi|261319001|ref|ZP_05958198.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94]
 gi|261319638|ref|ZP_05958835.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1]
 gi|265986996|ref|ZP_06099553.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1]
 gi|265996657|ref|ZP_06109214.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1]
 gi|225616450|gb|EEH13498.1| ATPase FliI/YscN family protein [Brucella ceti str. Cudo]
 gi|260918582|gb|EEX85235.1| flagellum-specific ATP synthase [Brucella ceti B1/94]
 gi|260921860|gb|EEX88428.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1]
 gi|261292328|gb|EEX95824.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1]
 gi|261298224|gb|EEY01721.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94]
 gi|262550954|gb|EEZ07115.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1]
 gi|264659193|gb|EEZ29454.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1]
          Length = 453

 Score =  431 bits (1109), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/418 (51%), Positives = 289/418 (69%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFE+TRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEKTRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|256043053|ref|ZP_05445998.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260564284|ref|ZP_05834769.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
 gi|265989490|ref|ZP_06102047.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260151927|gb|EEW87020.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
 gi|263000159|gb|EEZ12849.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 453

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQR G+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRTGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|225685990|ref|YP_002733962.1| flagellum-specific ATP synthase [Brucella melitensis ATCC 23457]
 gi|256262884|ref|ZP_05465416.1| flagellum-specific ATP synthase [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642095|gb|ACO02008.1| ATPase FliI/YscN family protein [Brucella melitensis ATCC 23457]
 gi|263092721|gb|EEZ16930.1| flagellum-specific ATP synthase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410316|gb|ADZ67380.1| flagellum-specific ATP synthase [Brucella melitensis M28]
 gi|326553609|gb|ADZ88248.1| flagellum-specific ATP synthase [Brucella melitensis M5-90]
          Length = 453

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/418 (51%), Positives = 289/418 (69%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL++  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAIMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|294853153|ref|ZP_06793825.1| flagellar protein export ATPase FliI [Brucella sp. NVSL 07-0026]
 gi|294818808|gb|EFG35808.1| flagellar protein export ATPase FliI [Brucella sp. NVSL 07-0026]
          Length = 453

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/418 (51%), Positives = 289/418 (69%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDG+IVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGYIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|62317081|ref|YP_222934.1| flagellum-specific ATP synthase [Brucella abortus bv. 1 str. 9-941]
 gi|83269074|ref|YP_418365.1| flagellum-specific ATP synthase [Brucella melitensis biovar Abortus
           2308]
 gi|189022348|ref|YP_001932089.1| flagellum-specific ATP synthase [Brucella abortus S19]
 gi|237816643|ref|ZP_04595635.1| ATPase FliI/YscN family [Brucella abortus str. 2308 A]
 gi|254691430|ref|ZP_05154684.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870]
 gi|254695271|ref|ZP_05157099.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya]
 gi|254698370|ref|ZP_05160198.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731815|ref|ZP_05190393.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292]
 gi|256256616|ref|ZP_05462152.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68]
 gi|260544322|ref|ZP_05820143.1| flagellum-specific ATP synthase [Brucella abortus NCTC 8038]
 gi|260757048|ref|ZP_05869396.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870]
 gi|260759581|ref|ZP_05871929.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292]
 gi|260762825|ref|ZP_05875157.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882858|ref|ZP_05894472.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68]
 gi|261215637|ref|ZP_05929918.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya]
 gi|297249973|ref|ZP_06933674.1| flagellar protein export ATPase FliI [Brucella abortus bv. 5 str.
           B3196]
 gi|62197274|gb|AAX75573.1| flagellum-specific ATP synthase FliI [Brucella abortus bv. 1 str.
           9-941]
 gi|82939348|emb|CAJ12295.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region:Disease resistance protein:ATP/GTP-binding site
           motif A [Brucella melitensis biovar Abortus 2308]
 gi|189020922|gb|ACD73643.1| flagellum-specific ATP synthase [Brucella abortus S19]
 gi|237787456|gb|EEP61672.1| ATPase FliI/YscN family [Brucella abortus str. 2308 A]
 gi|260097593|gb|EEW81467.1| flagellum-specific ATP synthase [Brucella abortus NCTC 8038]
 gi|260669899|gb|EEX56839.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292]
 gi|260673246|gb|EEX60067.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677156|gb|EEX63977.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870]
 gi|260872386|gb|EEX79455.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68]
 gi|260917244|gb|EEX84105.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya]
 gi|297173842|gb|EFH33206.1| flagellar protein export ATPase FliI [Brucella abortus bv. 5 str.
           B3196]
          Length = 453

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+   D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKSHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|148558082|ref|YP_001257195.1| flagellum-specific ATP synthase [Brucella ovis ATCC 25840]
 gi|148369367|gb|ABQ62239.1| flagellum-specific ATP synthase [Brucella ovis ATCC 25840]
          Length = 453

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDMVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGY  SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYTPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|254473365|ref|ZP_05086762.1| flagellum-specific ATP synthase protein [Pseudovibrio sp. JE062]
 gi|211957481|gb|EEA92684.1| flagellum-specific ATP synthase protein [Pseudovibrio sp. JE062]
          Length = 386

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/384 (53%), Positives = 278/384 (72%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113
            N +  G+VIRI  D V + P     ++ LG  V   G     P   W GR+INA G PI
Sbjct: 3   NNGEEFGEVIRIEPDSVLVKPYASRSDLGLGIKVKRCGELSFYPDNSWRGRIINAFGHPI 62

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG  S+ +G       +  PP ++R RV+    TG+RV+D+FTP+CHGQR+G+FAGSG+G
Sbjct: 63  DGLGSMAEGPTLASFNNLPPPPVHRARVKDAALTGVRVLDLFTPICHGQRLGIFAGSGVG 122

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM 233
           KSTLLSM ARS+ FD V+I L+GERGREVREF+E+ LGD L KSVVVVAT DESP++R++
Sbjct: 123 KSTLLSMIARSNSFDTVVIGLIGERGREVREFVEETLGDQLSKSVVVVATGDESPMMRRL 182

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP TA+T+AE+F  +G +VLLI+DS+TR+AH++R++A  +GE  ++RGYP SVFSELP L
Sbjct: 183 APKTAMTVAEHFRDQGQSVLLIVDSVTRYAHALRDVALAAGEPALSRGYPPSVFSELPLL 242

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER GP  +  G +TA+ SVLVDGD+HNDP+AD++R +LDGH+VL+R +AEEGRYP V+ 
Sbjct: 243 LERAGPGIEGSGMMTAIFSVLVDGDDHNDPVADNIRGLLDGHVVLDRHIAEEGRYPAVNV 302

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SRLA   WS  E++L++ L  +I +FE+T+D+R++GGY+ GVD +LD+A+   P I
Sbjct: 303 LGSISRLAQSCWSPQERELITKLKAMIAKFEDTKDLRMMGGYKEGVDPLLDQAIEIAPKI 362

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
           Y  L Q     SS+D F E+ + L
Sbjct: 363 YSALVQGLDAPSSQDAFNELAQLL 386


>gi|254720628|ref|ZP_05182439.1| flagellum-specific ATP synthase [Brucella sp. 83/13]
 gi|265985672|ref|ZP_06098407.1| flagellum-specific ATP synthase [Brucella sp. 83/13]
 gi|306837352|ref|ZP_07470231.1| ATPase FliI/YscN family [Brucella sp. NF 2653]
 gi|264664264|gb|EEZ34525.1| flagellum-specific ATP synthase [Brucella sp. 83/13]
 gi|306407544|gb|EFM63744.1| ATPase FliI/YscN family [Brucella sp. NF 2653]
          Length = 453

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALCRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMVGHLGKTITVVATGDESPVMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSIV 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445


>gi|240137256|ref|YP_002961725.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
 gi|240007222|gb|ACS38448.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
          Length = 442

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/420 (49%), Positives = 287/420 (68%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           LV   G +  +T+    V  +S +V LGD +         +G+V+RI+     + P    
Sbjct: 22  LVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVGEVVRIDAAGATVKPFESR 81

Query: 79  EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            E  +G L    G  ++ P   W GRVI+ALG+PIDG   L +G  S+ + +  P AM R
Sbjct: 82  IEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPIDGLGPLAEGPASVPLDADPPAAMTR 141

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A +  FD V+++LVGER
Sbjct: 142 ARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGAQGFDSVVVALVGER 201

Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           GREVREF+E  +     ++V+VV+T DESP++R+ AP  A+ +AE F  +G++VLLI+DS
Sbjct: 202 GREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALAVAESFRDRGESVLLIVDS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP  +  G IT + SVLVDGD
Sbjct: 262 VTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAEGTGTITGIFSVLVDGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+SRLA + W+ D+++LV  L  
Sbjct: 322 DHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAGEVWTGDQRELVRKLKS 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q P    S D F E+ + L+
Sbjct: 382 MMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPGQPPSRDAFLELAQSLR 441


>gi|163850122|ref|YP_001638165.1| flagellum-specific ATP synthase [Methylobacterium extorquens PA1]
 gi|163661727|gb|ABY29094.1| ATPase, FliI/YscN family [Methylobacterium extorquens PA1]
          Length = 442

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/420 (49%), Positives = 287/420 (68%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           LV   G +  +T+    V  +S +V LGD +         +G+V+RI+     + P    
Sbjct: 22  LVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVGEVVRIDAAGATVKPFESR 81

Query: 79  EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            E  +G L    G  ++ P   W GRVI+ALG+P+DG   L +G  S+ + +  P AM R
Sbjct: 82  IEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLAEGPASVPLDADPPAAMTR 141

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A +  FD V+++LVGER
Sbjct: 142 ARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGAQGFDSVVVALVGER 201

Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           GREVREF+E  +     ++V+VV+T DESP++R+ AP  A+ +AE F  +G++VLLI+DS
Sbjct: 202 GREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALAVAESFRDRGESVLLIVDS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP  +  G IT + SVLVDGD
Sbjct: 262 VTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAEGTGTITGIFSVLVDGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+SRLA + W+ D+++LV  L  
Sbjct: 322 DHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAGEVWTGDQRELVRKLKS 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q P    S D F E+ + L+
Sbjct: 382 MMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPGQPPSRDAFLELAQSLR 441


>gi|296447448|ref|ZP_06889373.1| ATPase, FliI/YscN family [Methylosinus trichosporium OB3b]
 gi|296255068|gb|EFH02170.1| ATPase, FliI/YscN family [Methylosinus trichosporium OB3b]
          Length = 446

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/424 (49%), Positives = 289/424 (68%), Gaps = 1/424 (0%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +K+L    G ++ + + +  V  LS +V LG+ V       + LGQV+++  D   +   
Sbjct: 17  NKDLARVSGLVTEVAASHCRVLGLSDFVELGECVRFGAPTDERLGQVVKVAKDGAIVKCF 76

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
                I L    F  G   I+P   W GRV++A G+P+D   ++ +GD S+++ +  P A
Sbjct: 77  DDRARIGLNTPAFRAGPIEIAPHPDWIGRVLDAFGRPVDDRGAVSRGDASLQVDASAPLA 136

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M R RV    +TG++ +D FTP+C GQRIGVFAGSG+GKSTLL M AR+  FD  ++ LV
Sbjct: 137 MRRARVTTPVRTGVKAVDCFTPICAGQRIGVFAGSGVGKSTLLGMLARAPGFDLAVVCLV 196

Query: 196 GERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+E+ L G + + S+ +VAT DESP++R++APLTA T+AEYF   G NVLL
Sbjct: 197 GERGREVREFLEEALAGAHARDSITIVATGDESPMMRRLAPLTATTVAEYFRDCGRNVLL 256

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           I+DS+TRFAH+ RE+A  +GE PVA GY  SVF+++PRLLER GP E+ KG IT V SVL
Sbjct: 257 IVDSVTRFAHASREVALAAGEPPVAHGYTPSVFADIPRLLERAGPGEEGKGTITGVFSVL 316

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGDNHNDPIAD VR  LDGHIVL+R++AE+GRYP +D   S+SRLA  AW  +++ L+ 
Sbjct: 317 VDGDNHNDPIADCVRGTLDGHIVLDRAIAEQGRYPAIDLKTSISRLAHHAWRPEQRHLIQ 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L  L+ RFE+TRD+R++GGY+ G D  LD++V  VP +Y+ + QSP    S D F+E+ 
Sbjct: 377 KLRALVSRFEDTRDLRMLGGYQKGSDPELDQSVLLVPKLYEAVCQSPQSPPSMDPFREVA 436

Query: 435 KKLQ 438
            +LQ
Sbjct: 437 DRLQ 440


>gi|254504837|ref|ZP_05116988.1| ATPase FliI/YscN family [Labrenzia alexandrii DFL-11]
 gi|222440908|gb|EEE47587.1| ATPase FliI/YscN family [Labrenzia alexandrii DFL-11]
          Length = 448

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 205/414 (49%), Positives = 288/414 (69%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +++    V+ LS+ VCLGD +  +G++    G++IR+    V + P+    +I +
Sbjct: 31  GQVTQVSAEAIRVSGLSRVVCLGDLIQFEGRSGVRQGEIIRLEQKDVVVKPLERVSDIGI 90

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           G +    G   I P   W GR+INALG+PIDG   L  G  +  +    PPAMNR++V +
Sbjct: 91  GSVASLMGGLAIHPDLSWRGRIINALGEPIDGQGQLRHGVEAFLLDRAPPPAMNREKVTE 150

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
           G +TG+RVID+FTPLC GQRIGVFAGSG+GKSTLL M A    FD V++ LVGERGREVR
Sbjct: 151 GVRTGVRVIDLFTPLCVGQRIGVFAGSGVGKSTLLGMLAGFGEFDTVVVGLVGERGREVR 210

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           EFI+D LG+ +  SVVV +T DES + R++AP TA+++AEYF ++G  VLLILDS TRFA
Sbjct: 211 EFIDDILGETIANSVVVASTGDESAMQRRLAPKTAMSVAEYFRAQGHKVLLILDSATRFA 270

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
           H+ R++A  +GE PVARGYP SVF++L RL+ER GP    +G+IT + SVLVDGD+HNDP
Sbjct: 271 HAARDVALAAGEPPVARGYPPSVFADLARLIERAGPGASGEGSITGIFSVLVDGDDHNDP 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           ++D++R +LDGHIVL+R  AE GRYPPV+ L S SRLA +AW+ D+++L+  +  LI  +
Sbjct: 331 VSDAIRGLLDGHIVLDRKTAESGRYPPVEILKSTSRLASRAWTEDQQELIHRIKGLISHY 390

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           E+T+D+R++GG++   D  L+KA   VP IY+ ++Q        D F E+ + L
Sbjct: 391 EDTKDLRMMGGFQITGDEHLEKACRLVPRIYEAMRQGAKQPVPGDPFAELAQAL 444


>gi|118589941|ref|ZP_01547345.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614]
 gi|118437438|gb|EAV44075.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614]
          Length = 448

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/407 (50%), Positives = 285/407 (70%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ ++S    V+ LS+ VCLGD V  +G++    G++IR++   V I P+    +I +
Sbjct: 31  GRVTQVSSESIRVSGLSRVVCLGDLVQFEGRSGVRQGEIIRLDQKDVVIKPLERVTDIGI 90

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           G +    G   I P   W GR++NALG+PIDG   L  G  +  +    PPAMNR ++ +
Sbjct: 91  GSVASVMGGLAIHPDMSWRGRIVNALGEPIDGAGPLAHGVEAFLLDRAPPPAMNRSKISE 150

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
           G +TG+RVID+FTPLC GQR+GVFAGSG+GKSTLL M A    FD V++ LVGERGREVR
Sbjct: 151 GVRTGVRVIDLFTPLCVGQRVGVFAGSGVGKSTLLGMLAGFGDFDTVVVGLVGERGREVR 210

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           EFI+D LG+ L  SVVV +T DES + R++AP TA+++AEYF ++G  VLLILDS TRFA
Sbjct: 211 EFIDDILGETLAHSVVVASTGDESAMQRRLAPKTAMSVAEYFRAQGHKVLLILDSATRFA 270

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
           H+ R++A  +GE PVARG+P SVF++L RL+ER GP    +G+IT + SVLVDGD+HNDP
Sbjct: 271 HAARDVALAAGEPPVARGFPPSVFADLARLIERAGPGSSGEGSITGIFSVLVDGDDHNDP 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           ++D++R +LDGHIVL+R +AE G YPPV  L S SRLAD+AW+ D++ L+  +  LI  +
Sbjct: 331 VSDAIRGLLDGHIVLDRQIAESGHYPPVSVLKSTSRLADRAWTQDQQDLIHRIKGLISYY 390

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           E+T+D+RL+GG++   D  L+KA   VP IY+ L+Q    ++  D F
Sbjct: 391 EDTKDLRLMGGFQTAGDEKLEKACRLVPRIYEALRQRSDQVAPSDPF 437


>gi|306841067|ref|ZP_07473790.1| ATPase FliI/YscN family [Brucella sp. BO2]
 gi|306288905|gb|EFM60208.1| ATPase FliI/YscN family [Brucella sp. BO2]
          Length = 413

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 213/402 (52%), Positives = 281/402 (69%), Gaps = 2/402 (0%)

Query: 39  LSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP 97
           LS+   LGD V +  G+ + +L ++IR+    V + P       SLG  VF  G  RI P
Sbjct: 4   LSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRP 63

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           +  W GRVINALG  IDG  +L  G   M   S  P A+ R RV++G +TG+ VIDIFTP
Sbjct: 64  TPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
           LC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGREVRE +E+ +  +L K+
Sbjct: 124 LCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGREVREMLEETMAGHLGKT 183

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           + VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TRFAH+ RE+A  + E P
Sbjct: 184 ITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPP 243

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           VARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+HNDP++D++R  LDGHI
Sbjct: 244 VARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R++A +GR+P VD   SVSRLA   W+ +++KLV  L  ++ RFEETRD+R IG Y+
Sbjct: 304 VLDRAIAAQGRFPAVDIPGSVSRLAKHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQ 363

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 364 KGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 405


>gi|323136552|ref|ZP_08071633.1| ATPase, FliI/YscN family [Methylocystis sp. ATCC 49242]
 gi|322397869|gb|EFY00390.1| ATPase, FliI/YscN family [Methylocystis sp. ATCC 49242]
          Length = 447

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/434 (48%), Positives = 291/434 (67%), Gaps = 5/434 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K ++  AQ      K+ V   G ++     ++ V  LS ++ L D V+ +G +     
Sbjct: 9   LRKAVDLYAQ-----EKDWVRIRGVVTEAFPSHFRVEGLSPFLRLDDCVMLEGHDRCFPA 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           Q IRIN D   I        + LG  V   G F I+P   W GRV+NA   PID  +   
Sbjct: 64  QAIRINRDGALIKAFESHAGVGLGARVTRTGPFEIAPHPDWKGRVLNAFAAPIDRREPPP 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G+    + +  P AM+R RV     TG+RV+D FTPLC GQR+GVFAGSG+GKSTLL+M
Sbjct: 124 PGEARRAVDASPPKAMSRGRVRDPAPTGVRVVDAFTPLCRGQRVGVFAGSGVGKSTLLAM 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +RS  FD V+I LVGERGREVR+F+++ LGD    ++ +VAT DESP++R++APLTA +
Sbjct: 184 MSRSAAFDAVVICLVGERGREVRDFLDEILGDRSNLAITIVATGDESPMMRRLAPLTATS 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G++VLLI+DS+TR+AH++REIA ++GE PVA G+  SVF++LPRLLER GP 
Sbjct: 244 IAEYFRDRGESVLLIMDSVTRYAHALREIALSAGEPPVANGFAPSVFADLPRLLERAGPG 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G ITA+ SVL+DGDNHNDPIAD +R  LDGHIVL R +AE+GRYP ++ L S+SRL
Sbjct: 304 VEGGGAITAIFSVLIDGDNHNDPIADCIRGTLDGHIVLEREIAEQGRYPAINVLKSISRL 363

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           AD+ WS +++ L++    LI ++E+TRD+R++GGY+PG D  LD+A+   P +Y+ LKQS
Sbjct: 364 ADRVWSGEQRDLINECRALISKYEDTRDLRMLGGYQPGADAALDRAIELAPRLYEALKQS 423

Query: 421 PSDLSSEDVFQEIT 434
           P    S D   EI 
Sbjct: 424 PHGEPSIDAIGEIA 437


>gi|170748126|ref|YP_001754386.1| flagellum-specific ATP synthase [Methylobacterium radiotolerans JCM
           2831]
 gi|170654648|gb|ACB23703.1| ATPase, FliI/YscN family [Methylobacterium radiotolerans JCM 2831]
          Length = 439

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/430 (49%), Positives = 285/430 (66%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           A L       L+  GG +  I + +  +      + LGD +  +    +  G+V+RI+ D
Sbjct: 9   AMLGRRDDPPLIRIGGSVREIGAGHCRIRIAVPLLRLGDRMRIEAAGREIDGEVVRIDED 68

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
            V + P     E  LG   +        P   W  RV+NALG PIDG   L  G  +M +
Sbjct: 69  GVILKPFEGRIEAGLGAPAYRVPTSGARPCEAWKDRVVNALGTPIDGKGDLPTGTRAMPL 128

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  PPAM R RV+   +TG+R +D+FTPLC  QRIG+FAGSG+GK+TLLSM AR   FD
Sbjct: 129 DADPPPAMARSRVDSPLRTGVRAMDLFTPLCAAQRIGIFAGSGVGKTTLLSMLARCSGFD 188

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            V+++LVGERGREVREF+E  + ++  ++VVVVAT DESP++R+ AP  A  +AEYF  +
Sbjct: 189 AVVVALVGERGREVREFLEGPMRESRSRAVVVVATGDESPMMRRQAPKLAFAVAEYFRDQ 248

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL+LDS+TRFAH+ RE+A  +GE PVARGYP SVF +LPRLLER GP     G IT
Sbjct: 249 GQSVLLVLDSVTRFAHAAREVALAAGEPPVARGYPPSVFGDLPRLLERAGPGLDGGGAIT 308

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + SVLVDGD+HNDP+ADS+R  LDGHIVL+R++A++GRYP +D L S+SRLAD+ W+  
Sbjct: 309 GLFSVLVDGDDHNDPVADSIRGTLDGHIVLDRAIADQGRYPAIDVLGSISRLADRVWTEQ 368

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +++LV  L  LI R+E++RD+RL+GGY  G D  LD+AV  VP IYD L+Q P+D  S D
Sbjct: 369 QRQLVRMLKSLIARYEDSRDLRLMGGYHVGADPELDQAVALVPKIYDALRQDPTDPQSLD 428

Query: 429 VFQEITKKLQ 438
            F ++   L+
Sbjct: 429 AFLDLATALR 438


>gi|114706757|ref|ZP_01439657.1| flagellum-specific ATP synthase [Fulvimarina pelagi HTCC2506]
 gi|114537705|gb|EAU40829.1| flagellum-specific ATP synthase [Fulvimarina pelagi HTCC2506]
          Length = 446

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/415 (49%), Positives = 286/415 (68%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +    + V  LS +V LGD +   G++ D LG+V+RI+ D + + P        +
Sbjct: 20  GRIVDVGPQSFRVAGLSPFVRLGDCISCPGEDRDELGEVVRIDADSLTVKPYTTRFNRGV 79

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           G      G F I+P A W GRV++A  +P D    + +G+    + ++   A+ R R+ +
Sbjct: 80  GSPAIKVGPFSITPDASWRGRVLDAFCRPQDDKGPVRQGEAIRPVDAQPLSALKRARLSE 139

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
           G  TG+ V+DIFTPL  GQRIGVFAGSG+GKSTL+ M ++S  FD VI++LVGERGREVR
Sbjct: 140 GVPTGVSVVDIFTPLVKGQRIGVFAGSGVGKSTLMGMLSQSKGFDTVIVALVGERGREVR 199

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           EF+E+ +   L K V +VAT DESP++R++AP TA  +AE+F  +GD+VLLI+DS+TR+A
Sbjct: 200 EFLEEVMAGQLDKVVTIVATGDESPMMRRLAPRTATAVAEHFRDRGDDVLLIVDSVTRYA 259

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
           H+ R++A ++GE PV+RGYP S+FSELP+LLER G   +  G IT + +VLVDGD+HNDP
Sbjct: 260 HAARDVALSAGEPPVSRGYPPSIFSELPQLLERAGTGIEGSGTITGIYAVLVDGDDHNDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           IAD++R  LDGHIVL+R +AE+GR+P VD L S+SRLA+KAW   E++LV+ L  +  RF
Sbjct: 320 IADAIRGTLDGHIVLDREIAEQGRFPAVDYLKSISRLAEKAWHGSERELVTRLRAMTSRF 379

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           E+TRD+RL+GGY+ G D  LD+AV  VP IYDFL Q P +   E  F  ++  L+
Sbjct: 380 EDTRDLRLLGGYQRGSDQTLDQAVDLVPHIYDFLTQRPGEGWHEKPFDALSAALK 434


>gi|312115281|ref|YP_004012877.1| ATPase, FliI/YscN family [Rhodomicrobium vannielii ATCC 17100]
 gi|311220410|gb|ADP71778.1| ATPase, FliI/YscN family [Rhodomicrobium vannielii ATCC 17100]
          Length = 459

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/433 (49%), Positives = 290/433 (66%), Gaps = 3/433 (0%)

Query: 5   LETLAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LETLA+  E      L +  G +  +++ +  V  LS+Y  LGD+V       D + + +
Sbjct: 22  LETLAETFEAALDDRLAIVSGRVVELSTEHIRVEGLSKYTKLGDWVSIATDVGDAIAETL 81

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           R+  D + +  +    +  LG  V      ++ P   W GRVI+ALG+PID    L +G 
Sbjct: 82  RVERDTILVRTIEERHQPFLGAPVRLASTMKLRPDETWKGRVIDALGRPIDNGPPLARGR 141

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S+ +    P A+ RQRV +   TG+RVID+FTPLC GQRIG+FAGSG+GKSTLLSM  R
Sbjct: 142 RSIPVDQAPPLALERQRVSEPVPTGVRVIDVFTPLCAGQRIGIFAGSGVGKSTLLSMLTR 201

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
              FD  + + +GERGREVREFI+D L    L K+V+VV+TSDESP++R++A  TA T+A
Sbjct: 202 GSSFDVTVFAAIGERGREVREFIDDTLAKAGLAKAVLVVSTSDESPMMRRLAAKTAFTVA 261

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G  VLL+ DS+TR+AH++REIA +SGE PV+RGYP SVF++LP+LLER G +  
Sbjct: 262 EYFRDEGQRVLLVFDSVTRYAHAVREIALSSGEPPVSRGYPPSVFTDLPKLLERAG-NAS 320

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT V SVLVDGD+HNDP+AD++R ILDGHIVL+R++A++GR+P VD L SVSRLA 
Sbjct: 321 GTGSITGVFSVLVDGDDHNDPVADTLRGILDGHIVLDRAIADQGRFPAVDILGSVSRLAP 380

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           + WS  +K  V  L  LI RFEETRDIR+I G++P  D  LDKAV  VP +Y +L QS  
Sbjct: 381 RVWSPSQKTAVRDLRGLISRFEETRDIRMIAGHKPNNDAELDKAVRLVPALYRYLTQSAE 440

Query: 423 DLSSEDVFQEITK 435
           DL   +   ++ +
Sbjct: 441 DLHPGETLDDMLR 453


>gi|170744542|ref|YP_001773197.1| flagellum-specific ATP synthase [Methylobacterium sp. 4-46]
 gi|168198816|gb|ACA20763.1| ATPase, FliI/YscN family [Methylobacterium sp. 4-46]
          Length = 441

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/423 (47%), Positives = 288/423 (68%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S  +V  GG +  +T+    V  ++ +V LGD +  +      + +V+R++     + P 
Sbjct: 18  SLPVVRVGGPVREVTASACRVAGVAPFVRLGDRMGIEADGRVQIAEVVRVDAAGATLKPF 77

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               E  +G   F  G  R+ P+  W GRV++ALG+P+DG   L  G   + + +  P A
Sbjct: 78  EARIEAGIGTRAFRIGPARVRPAPSWKGRVLDALGRPLDGLGPLPPGPDLVPLDADPPAA 137

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R R+    +TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A +  FD V+++LV
Sbjct: 138 LGRARLRAPLRTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGARGFDSVVVALV 197

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGREVREF+E  L  +  ++ +VV+T DESP++R+ AP  A+ +AE    +G+ VLLI
Sbjct: 198 GERGREVREFLEGPLAASRGRAAIVVSTGDESPMMRRQAPRLAMAVAESLRDRGEAVLLI 257

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+AH+ R++A  +GE  VARG+P SVFS+LPRLLER GP +  +G+IT + SVLV
Sbjct: 258 VDSVTRYAHAARDVALAAGEPAVARGFPPSVFSDLPRLLERAGPGQDGRGSITGIFSVLV 317

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+HNDP+ADS+R  LDGH+VL+R +A++GRYP +D L S+SRL+D+ W+ +++ +V  
Sbjct: 318 DGDDHNDPVADSIRGTLDGHVVLDRGIADQGRYPAIDLLGSISRLSDQVWTPEQRDVVRR 377

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  +I RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q P    SED F E+ +
Sbjct: 378 LKGMIARFEETRDLRLMGGYRAGSDAELDQAVGLVPRIYESLRQEPGQPPSEDAFLELAQ 437

Query: 436 KLQ 438
            L+
Sbjct: 438 SLR 440


>gi|27355166|dbj|BAC52150.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
          Length = 379

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/377 (52%), Positives = 270/377 (71%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           ++RI+ + +   P        LG + +       +P   W GRVINALG P+DG   L  
Sbjct: 1   MVRIDSEGIIAKPFDRQFAGGLGSVAYRMPPLSFAPDPSWKGRVINALGAPLDGQGPLTP 60

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G  ++   ++ P AM R RV K  +TG+RVID+F P+C GQR+G+FAGSG+GKSTLL+M 
Sbjct: 61  GSRAVSAEAEAPSAMKRARVHKPLRTGVRVIDLFAPICAGQRVGIFAGSGVGKSTLLAML 120

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ARS  FD V+++LVGERGREVREFIED LG N  ++V +V+T DESP++R++AP TA+ +
Sbjct: 121 ARSQGFDTVVLALVGERGREVREFIEDVLGANRNRAVTIVSTGDESPMMRRLAPKTAMAV 180

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G++VLL++DSITRFAH+ RE+A  +GE  VARGY  +VF++LPRLLER GP E
Sbjct: 181 AEYFRDRGESVLLVVDSITRFAHAAREVALAAGEPAVARGYAPTVFTDLPRLLERAGPGE 240

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G IT + SVLVDGD+HN+PIAD++RS LDGHIVL+R +A++ RYP VD LASVSRLA
Sbjct: 241 EGSGTITGIFSVLVDGDDHNEPIADTIRSTLDGHIVLSRHIADQARYPAVDVLASVSRLA 300

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W  +E++LVS L  +I ++E+TRD+RL+GGY+ G D  LD+A+  VP IY  ++Q  
Sbjct: 301 HNVWDPEERELVSKLRTMIAKYEDTRDLRLMGGYQSGRDSGLDQAIDLVPRIYSAMRQDA 360

Query: 422 SDLSSEDVFQEITKKLQ 438
           S   S D F+E+   L+
Sbjct: 361 SAQPSADPFRELRDMLK 377


>gi|17989450|ref|NP_542083.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
 gi|17985329|gb|AAL54347.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
          Length = 380

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/358 (56%), Positives = 260/358 (72%), Gaps = 1/358 (0%)

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 15  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 74

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQR G+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 75  DRGLRTGVNVIDIFTPLCFGQRTGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 134

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 135 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 194

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 195 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 254

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 255 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 314

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 315 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 372


>gi|23011134|ref|ZP_00051589.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
           [Magnetospirillum magnetotacticum MS-1]
          Length = 339

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/335 (55%), Positives = 253/335 (75%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV++ALG+P+DG   L +G  S+ + +  P AM R RV+    TG+R ID+FTPLC GQR
Sbjct: 4   RVVDALGRPVDGLGPLQEGGDSVALDADPPSAMTRARVKTPLLTGVRAIDLFTPLCAGQR 63

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223
           IG+FAGSG+GKSTLL+M A ++ FD V+++LVGERGREVREF+E  +     ++V+VV+T
Sbjct: 64  IGIFAGSGVGKSTLLAMLAGAEGFDSVVVALVGERGREVREFLEGPIAAVRDRAVIVVST 123

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
            DESP++R+ AP  A+ +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP
Sbjct: 124 GDESPMMRRQAPKVALAVAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYP 183

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SVFS+LPRLLER GP  + KG IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++A
Sbjct: 184 PSVFSDLPRLLERAGPGAEGKGAITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIA 243

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E+GRYP +D L S+SRLA + WS D+++LV  L  ++ RFEETRD+RL+GGYR G D  L
Sbjct: 244 EQGRYPAIDLLGSISRLAGEVWSGDQRELVRKLKTMMARFEETRDLRLMGGYRAGSDPDL 303

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           D+AV  VP IY+ L+Q P    S D F E+ + L+
Sbjct: 304 DQAVTLVPRIYEALRQEPGQPPSRDAFLELAQSLR 338


>gi|10644737|gb|AAG21379.1| flagella-specific ATPase [Bartonella bacilliformis]
          Length = 315

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/313 (58%), Positives = 244/313 (77%)

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M + +  PPA+ R RV  G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM  ++D
Sbjct: 1   MAVEAHAPPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMMQAD 60

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            FDKV+++L GERGREVR+ ++D L D L K V V+ATSDESP++R++AP+ A TIAEYF
Sbjct: 61  HFDKVVLALTGERGREVRDMLDDTLQDKLDKVVAVIATSDESPMMRRLAPIMATTIAEYF 120

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
           SS GDNVLL++DSITR+A ++REIA ++ E PV+RG+P  VFSELPRLLER GP  K KG
Sbjct: 121 SSLGDNVLLVVDSITRYALAVREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGRKGKG 180

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD  +S+SRLA  +W
Sbjct: 181 SITGVYAVLVDGDDHNDPIADAIRGILDGHIVLDRAIAAQGRFPAVDISSSISRLASHSW 240

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           + +++ LV SL  +I R+EETRD+R +G YRPG D ILD+AVH VP IY  + Q+     
Sbjct: 241 TGEQRILVQSLKEMIFRYEETRDLRAMGAYRPGTDHILDQAVHLVPSIYAAMNQNIDTPL 300

Query: 426 SEDVFQEITKKLQ 438
             + + E+ K L+
Sbjct: 301 VRNPYDELAKLLK 313


>gi|254706313|ref|ZP_05168141.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10]
 gi|261313760|ref|ZP_05952957.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10]
 gi|261302786|gb|EEY06283.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10]
          Length = 390

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 252/363 (69%), Gaps = 2/363 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+IT + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387

Query: 381 HRF 383
            RF
Sbjct: 388 ARF 390


>gi|23499892|ref|NP_699332.1| flagellum-specific ATP synthase [Brucella suis 1330]
 gi|23463467|gb|AAN33337.1| flagellum-specific ATP synthase FliI [Brucella suis 1330]
          Length = 422

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/418 (48%), Positives = 263/418 (62%), Gaps = 33/418 (7%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           GG +S ++     V  LS+   LGD V +  G+ + +L ++IR+    V + P       
Sbjct: 28  GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV
Sbjct: 88  SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKLGTRPMAAESLAPAALRRARV 147

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGRE
Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TR
Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320
           FAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   E  G+I  + SVLVDGD+H
Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSIAGIYSVLVDGDDH 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP                               ASVSRLA   W+ +++KLV  L  ++
Sbjct: 328 NDP-------------------------------ASVSRLAKHNWTPEQRKLVMQLRSMV 356

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 357 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 414


>gi|114765225|ref|ZP_01444357.1| flagellum-specific ATP synthase [Pelagibaca bermudensis HTCC2601]
 gi|114542360|gb|EAU45388.1| flagellum-specific ATP synthase [Roseovarius sp. HTCC2601]
          Length = 418

 Score =  337 bits (863), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 176/402 (43%), Positives = 256/402 (63%), Gaps = 3/402 (0%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRF 93
           TV+ L + V +G   V QG N   L +V+ I+     + P G  + +  GD V       
Sbjct: 3   TVSGLERAVGIGAHCVVQGANGPVLAEVVGIDESGTRLLPFGSWDGVRTGDPVAVTQSGA 62

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            + P   W GRV+NALG+P+DG   L +GD    + +  PPA  R+RV     T ++V+D
Sbjct: 63  ELRPDDAWIGRVVNALGQPLDGKGRLPEGDRPRPLRAAPPPAFTRRRVGDRLSTRLKVMD 122

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212
           +F PLC GQR+GVF+GSG+GKST+++M AR+   D +++ LVGERGREV++F++D LG+ 
Sbjct: 123 VFAPLCRGQRMGVFSGSGVGKSTMMAMLARNAQADVIVVGLVGERGREVQDFLQDDLGEE 182

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L ++VVVV+T DE P++R+ A  TA T+AE+F  +G  VLL+LDS+TRFA + REI   
Sbjct: 183 GLARAVVVVSTGDEPPLMRRQAAWTATTVAEHFRDQGKQVLLLLDSVTRFAMAQREIGLA 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE P A+GYP + F+ELPR++ER GP   E G+ITA+ +VLVDGD+ +DPIAD+VR I+
Sbjct: 243 GGEPPTAKGYPPTTFAELPRMMERAGPGSGEGGDITALYTVLVDGDDMDDPIADAVRGIM 302

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIVL+R +AE GR+P V+ L S+SR+       +E  +  +    + R+ +  ++  I
Sbjct: 303 DGHIVLDRRIAETGRFPAVNLLRSISRMLPDCHGPEEYAIYRAARCAMARYADMEELIRI 362

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
           G YRPG D  +D A+     + D L+QS  D +   + F  I
Sbjct: 363 GAYRPGSDAEVDAAIKLFQPLEDLLRQSKRDAMEPNETFARI 404


>gi|84502399|ref|ZP_01000535.1| flagellum-specific ATP synthase [Oceanicola batsensis HTCC2597]
 gi|84389211|gb|EAQ02008.1| flagellum-specific ATP synthase [Oceanicola batsensis HTCC2597]
          Length = 450

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 184/440 (41%), Positives = 271/440 (61%), Gaps = 5/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M+     L+ LA       +   G +S+I  +  TV  L++ + +G     +GK    L 
Sbjct: 1   MKTAFSQLSTLARTTEGARIA--GEVSAIVGLTLTVVGLNRALGIGQRCTIKGKKGPVLA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ ++     + P G    +++GD V        I P   W GRV+NALG PIDG  SL
Sbjct: 59  EVVSVDEKGTQVLPFGNWNGVTIGDRVEISTSGESIRPDLSWIGRVLNALGDPIDGLGSL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G +     +  P A  R+RV +   TG+RV D+FTPLC GQR+G+FAGSG+GKS+LLS
Sbjct: 119 HEGPVPCPPKNTPPNAYARRRVGERIDTGVRVFDVFTPLCKGQRMGIFAGSGVGKSSLLS 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D +++ LVGERGREV++FI+  LG + L +SV+VV+T DE P++R+ A  TA
Sbjct: 179 MMARRAEADVIVVGLVGERGREVQDFIQKDLGAEGLNRSVIVVSTGDEPPLMRRQAAWTA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G  VLL++DS+TRFA + REI    GE P  +GYP +VFSELP+LLER G
Sbjct: 239 TAVAEYFRDQGLQVLLLIDSVTRFAMAQREIGLAGGEPPTTKGYPPTVFSELPQLLERSG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P   EKG+ITA+ +VLVDGD+ N+P++D+ R I+DGH+VL+R++AE+GR+P V+   SVS
Sbjct: 299 PGVGEKGDITALYTVLVDGDDMNEPVSDAARGIMDGHVVLDRAIAEQGRFPAVNIQKSVS 358

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +  E  ++ +    + R+ +  ++  IG YR G D  +D AV       +FL 
Sbjct: 359 RMLPDCHNPGEYAVLKAARRALARYADMEELIRIGAYREGSDEEIDAAVRFARPAENFLT 418

Query: 419 QSPSD-LSSEDVFQEITKKL 437
           QS ++  +SE  F ++ + L
Sbjct: 419 QSKTESTTSEQAFAKLYELL 438


>gi|89068700|ref|ZP_01156086.1| flagellum-specific ATP synthase [Oceanicola granulosus HTCC2516]
 gi|89045663|gb|EAR51725.1| flagellum-specific ATP synthase [Oceanicola granulosus HTCC2516]
          Length = 438

 Score =  334 bits (856), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 175/417 (41%), Positives = 258/417 (61%), Gaps = 3/417 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +SS+  +  T T L + + +G      G     LG+V+ ++    +I P G  + I  
Sbjct: 8   GRVSSVRGLLLTATGLERAIGIGQRCRVLGAGGAVLGEVVGVDGAGSHILPFGTWDGIVA 67

Query: 84  GDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V       R+ P   W GRV++ LG+P+D    L +G     + +  PPA +R+RV 
Sbjct: 68  GDQVEVSPQGERVRPCDGWIGRVVDPLGRPLDRAGPLPEGRSPRAVRAGPPPAFDRRRVG 127

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
              +TGIR  D FTPLC GQR+GVFAGSG+GKSTL++M AR+   D +++ L+GERGREV
Sbjct: 128 ARLETGIRAFDAFTPLCRGQRMGVFAGSGVGKSTLMAMLARNADVDVIVVGLIGERGREV 187

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           ++FI+  LG + L ++V+VVAT DE P++R+ A  TA+ +AE+F  +G  VLL+LDSITR
Sbjct: 188 QDFIQADLGPEGLARAVLVVATGDEPPLMRRQAAWTAMAVAEHFRDRGKQVLLLLDSITR 247

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + REI  + GE P +RGYP +VF+ELPRLLER GP    +G+ITA+ +VLV+G +  
Sbjct: 248 FATAQREIGLSGGEPPTSRGYPPTVFAELPRLLERAGPGCDGQGDITALFTVLVEGSDME 307

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+ADSVR I DGH++L+R +AE GRYP +D   SVSR+       DE  ++S+    + 
Sbjct: 308 EPVADSVRGITDGHVILDRRIAERGRYPAIDLQRSVSRMLPDCHGPDEFAILSAARRALG 367

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEITKKL 437
           R+ +  ++  IG YRPG D   D A+     +  +L Q   + +   + F ++ + L
Sbjct: 368 RYGDMEELVRIGAYRPGSDPETDAAIRFADPVAAYLGQRKGEATPPRETFADLYRLL 424


>gi|209963545|ref|YP_002296460.1| flagellum-specific ATP synthase [Rhodospirillum centenum SW]
 gi|209957011|gb|ACI97647.1| H+-transporting two-sector ATPase FliI [Rhodospirillum centenum SW]
          Length = 461

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 178/416 (42%), Positives = 259/416 (62%), Gaps = 8/416 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G +SS + +   V  L + + +GD      ++   L  +VI  ++    + P G  + + 
Sbjct: 21  GKVSSCSGMTVEVEGLERRLAVGDACRVFARDGRALACEVIGFSVGRAVLMPFGPLDGLG 80

Query: 83  LGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           LG  V   G    FR  P+  W GRV++  G+P+DG   L +GD +  + +  P A  R+
Sbjct: 81  LGCRVETGGEPASFR--PALSWLGRVVDGFGRPVDGRGPLSRGDENRVLRAAPPHAYERR 138

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+    +TG+RV+D F PLC GQR+GVFAGSG+GKSTLL+M ARS   D  +I L+GERG
Sbjct: 139 RIGPRLETGLRVVDTFVPLCRGQRLGVFAGSGVGKSTLLAMLARSSAADVNVIGLIGERG 198

Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV+EFI+D LG + L +SVVVVATSDE  ++R+ A    + +AEYF  +G +VL ++DS
Sbjct: 199 REVQEFIQDDLGPEGLARSVVVVATSDEPALMRRQAAWLTLGLAEYFRDQGRDVLCMMDS 258

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI  ++GE P  +GYP +VF+ELPRLLER GP  +  G+IT + +VLV+G 
Sbjct: 259 VTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAGPGREGTGDITGIFTVLVEGG 318

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +H++P+AD+VR ILDGH+VL RS+AE GRYP  D L SVSR      S +E   +     
Sbjct: 319 DHDEPVADAVRGILDGHLVLTRSIAERGRYPAADVLKSVSRALPGCHSEEENLTMGRARA 378

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEI 433
           L+ R+E   ++  +G Y+ G D  LD A+     + +FL+Q  ++ + S D F  +
Sbjct: 379 LLARYESMEELVRLGAYKAGSDPELDLAIKANEPLENFLRQGKTETTASADAFARL 434


>gi|154252622|ref|YP_001413446.1| flagellum-specific ATP synthase [Parvibaculum lavamentivorans DS-1]
 gi|154156572|gb|ABS63789.1| flagellar protein export ATPase FliI [Parvibaculum lavamentivorans
           DS-1]
          Length = 445

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 227/333 (68%), Gaps = 2/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS+ W GRV+NA+G+P+DG   + +G     + +  PPA  RQRV      G+R ++ 
Sbjct: 91  VYPSSAWLGRVVNAMGEPMDGKGPIAQGAQPYLLRNMPPPAHTRQRVRGKIDLGVRALNT 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+G+FAGSG+GKS LLSM AR+   D  +I L+GERGREV+EFIED LG + 
Sbjct: 151 FTTCCRGQRMGIFAGSGVGKSVLLSMLARNTACDVSVIGLIGERGREVQEFIEDDLGPEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDE  ++R+ A    +++AEYF  +  NVL ++DS+TRFA + REI  ++
Sbjct: 211 LARSVVVVATSDEPALMRRQAAYLTLSLAEYFRDRDQNVLCMMDSVTRFAVAQREIGLST 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELP+LLER GP     GNIT + +VLVDGD+HN+P+AD+VRSILD
Sbjct: 271 GEPPTSKGYTPTVFAELPKLLERAGPGTG-SGNITGLFTVLVDGDDHNEPVADAVRSILD 329

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV+ RS+AE GRYP ++ L SVSR       A+E +L+     L+  +++  ++  +G
Sbjct: 330 GHIVMERSIAERGRYPAINVLKSVSRTMPDCNEAEENELIRRARALMATYDDMEELIRLG 389

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YRPG D  +D+A+   P +  FL Q+  D SS
Sbjct: 390 AYRPGSDPQVDEAIFYQPALEAFLAQNKHDASS 422


>gi|144900259|emb|CAM77123.1| flagellum-specific ATP synthase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 450

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 166/345 (48%), Positives = 234/345 (67%), Gaps = 3/345 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS  W GRVINA  +P+DG   L  GD    I +  P A +RQRV      G+R ++ 
Sbjct: 95  VHPSDAWLGRVINAFAQPVDGLGPLPLGDNPYPIRATPPSAHSRQRVAGKVDLGVRAVNS 154

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F  +C GQR+G+FAGSG+GKS++LSM A++   D  II L+GERGRE REFIED LG + 
Sbjct: 155 FLTMCRGQRMGIFAGSGVGKSSILSMMAKNTSCDVSIIGLIGERGREAREFIEDDLGEEG 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           +K+SVVVV+TSDESP++R+ A    +++AEYF  +G +VL ++DS+TRFA + REI+ ++
Sbjct: 215 MKRSVVVVSTSDESPLMRRQAAYLTLSVAEYFRDQGKDVLCMMDSVTRFAMAQREISLSA 274

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELPRLLER GP    KG+IT + +VLVDGD+HN+PI+D+VR ILD
Sbjct: 275 GEPPASKGYTPTVFAELPRLLERAGPGTG-KGSITGLFTVLVDGDDHNEPISDAVRGILD 333

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R++A+ GRYP V+ L SVSR      +  E  LVS    L+  +E+  ++  +G
Sbjct: 334 GHIVLDRAIADRGRYPAVNILRSVSRTMPGCNNEQENALVSRARKLLATYEDMAELIRLG 393

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
            YR G D  +D+A+H  P+I   L Q   D +S  D + ++ + L
Sbjct: 394 AYRKGTDPAVDEAIHYYPMIEKLLTQGKKDATSLRDCYAQLAQVL 438


>gi|254505088|ref|ZP_05117239.1| flagellar protein export ATPase FliI [Labrenzia alexandrii DFL-11]
 gi|222441159|gb|EEE47838.1| flagellar protein export ATPase FliI [Labrenzia alexandrii DFL-11]
          Length = 441

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 159/326 (48%), Positives = 222/326 (68%), Gaps = 1/326 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS  W GRVINALG+PIDG   L  G L  ++ S  PPA  R RV      G+R ++ 
Sbjct: 92  VHPSNAWLGRVINALGEPIDGKGPLPNGGLPRKLRSAPPPASERARVGPPLDLGVRALNT 151

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213
           F   C GQR+G+FAGSG+GKS L+SM AR+   D  +I L+GERGREV+EFIED LG+  
Sbjct: 152 FVTCCEGQRMGIFAGSGVGKSVLMSMLARNTQCDTAVIGLIGERGREVQEFIEDDLGEEG 211

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDES ++R+ A   A+T+AE+F  +GD VL ++DS+TRFA + REI  + 
Sbjct: 212 LARSVVVVATSDESVLMRRQAAYLAMTVAEHFRDEGDKVLCMMDSVTRFAMAQREIGLSI 271

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELPRLLER GP +   G+IT + +VLV+GDNHN+P+AD+VR ILD
Sbjct: 272 GEPPTSKGYTPTVFTELPRLLERAGPGKSGSGSITGLFTVLVEGDNHNEPVADAVRGILD 331

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GH+V+ R +AE GRYP ++ L SVSR   +    +++ ++     L+  + +  ++  +G
Sbjct: 332 GHVVMERGIAERGRYPAINVLKSVSRTMPRCVPPEQQPVLRKAKQLLSTYTDMEELIRLG 391

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            YR G D  +D+A+++   I DFL Q
Sbjct: 392 AYRRGSDPTVDEAIYRFGPIDDFLNQ 417


>gi|92118831|ref|YP_578560.1| flagellum-specific ATP synthase [Nitrobacter hamburgensis X14]
 gi|91801725|gb|ABE64100.1| ATPase FliI/YscN [Nitrobacter hamburgensis X14]
          Length = 454

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 160/350 (45%), Positives = 239/350 (68%), Gaps = 5/350 (1%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ P+  W GRV+NA+G+PIDG  +L +G + +   +  PPA +R+RV K    G+R ++
Sbjct: 102 QVRPAPSWLGRVLNAMGEPIDGKGALPQGPVPVPFRNSPPPAHSRKRVGKPLDLGVRALN 161

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212
            F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGERGREV+EF++D LG+ 
Sbjct: 162 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADISVIGLVGERGREVQEFLQDDLGEE 221

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + +AEYF  +G +V+ ++DS+TRFA + REI  +
Sbjct: 222 GLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEGKDVMCMMDSVTRFAMAQREIGLS 281

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P  +GY  +VF+ELPRLLER GP   +KG IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 282 TGEPPTTKGYTPTVFTELPRLLERAGPGAADKGTITGIFTVLVDGDDHNEPVADAVRGIL 341

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ R++AE GRYP ++ L SVSR   K+       +++    ++  F +  ++  +
Sbjct: 342 DGHIVMQRAIAERGRYPAINVLKSVSRTMPKSADPAFLPVITRGRQVMATFSDMEELIRL 401

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF---QEITKKLQ 438
           G YR G +  +D+A+   P++ DFL+Q+  +++S ED +   Q+I K L+
Sbjct: 402 GAYRTGSNAEVDEAIRLNPLLEDFLRQAKDEVTSIEDGYRRLQQILKTLE 451


>gi|58040126|ref|YP_192090.1| flagellum-specific ATP synthase [Gluconobacter oxydans 621H]
 gi|58002540|gb|AAW61434.1| Flagellum-specific ATP synthase [Gluconobacter oxydans 621H]
          Length = 452

 Score =  326 bits (835), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 184/443 (41%), Positives = 274/443 (61%), Gaps = 18/443 (4%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           LE L+ L  D+    VV  G +  +  +  TV  L  ++ +GD V  +  +   +  +V+
Sbjct: 8   LERLSNLTCDW----VV--GSVKDVIGLCLTVIGLEGFITIGDRVAVKALDGRVVQSEVV 61

Query: 64  RINLDIVYICPVGIGEEISLG-----DLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
               D+  +   G  + I  G      L  H G   ++ S  W GRV++ LG+PIDG   
Sbjct: 62  GFQGDVARLMSFGPLDGIGPGCEARIPLNRHDGGLGVNES--WLGRVLDPLGQPIDGKGP 119

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L        +    P A +R R+ +    G+R +D FT    GQR+G+FAGSG+GKSTLL
Sbjct: 120 LFPSFERQPVQCPPPNAASRARLGERIDLGVRALDTFTTCRRGQRLGLFAGSGVGKSTLL 179

Query: 179 SMFAR-SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           SM AR +DC D  +ISLVGERGREVREFIED LG + L +SV+V+ATSD  P++R+ A L
Sbjct: 180 SMLARGADC-DVAVISLVGERGREVREFIEDDLGPEGLARSVLVIATSDSPPLMRREAAL 238

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +A+ IAEYF ++G +VLL++DS+TRF  ++REI  ++GE P  RGYP SVF+ELPRLLER
Sbjct: 239 SAMAIAEYFRNQGKSVLLLMDSVTRFCMALREIGLSAGEPPATRGYPPSVFAELPRLLER 298

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            GP   ++G ITA+ +VLV+GD+ N+P+AD+VR ILDGHI+L+R + E+GRYP +D L S
Sbjct: 299 AGPGYADQGMITALFTVLVEGDDQNEPVADAVRGILDGHIILDRKIGEQGRYPAIDVLRS 358

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR      S +E  L       +  ++   D+  +G Y+PG D  +D+A+  +P + +F
Sbjct: 359 LSRAVPGCNSPEENALTQRARAAMATYQRMADMIRLGAYKPGTDREVDEAIALMPKLNEF 418

Query: 417 LKQSPSDLSSE-DVFQEITKKLQ 438
           L Q  ++ ++  + F+++ + +Q
Sbjct: 419 LSQGRNERTTRAEAFEQLAQIMQ 441


>gi|296531772|ref|ZP_06894594.1| H+-transporting two-sector ATPase FliI [Roseomonas cervicalis ATCC
           49957]
 gi|296267911|gb|EFH13716.1| H+-transporting two-sector ATPase FliI [Roseomonas cervicalis ATCC
           49957]
          Length = 448

 Score =  325 bits (834), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 176/435 (40%), Positives = 265/435 (60%), Gaps = 6/435 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIR 64
           +T AQLA    +    + G ++++     +VT L + V +GD + V +       G+ + 
Sbjct: 13  DTAAQLARLPRRQ---RYGTLAAVRGAALSVTGLGEGVAIGDRMRVQRHGRPPVHGEFVA 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
            + D     P G  E +S G  ++      + PS  W GRV+++LG+P+DG   L +G  
Sbjct: 70  FSPDSAIAVPEGGTEGLSPGARLWLEEPLCLYPSDAWLGRVVDSLGRPMDGRGPLPQGRR 129

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + +    P A++R+ +    +TG+R +D+FTP+C GQR+G+FA SG+GKSTL+ M AR 
Sbjct: 130 GVRLRQPPPAALSRKLIGARLETGLRALDVFTPICRGQRLGIFAASGVGKSTLIGMLARF 189

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D +++ LVGERGREVREF++  LG+   ++SVVVV+TSDE  + R+ A   ++ IAE
Sbjct: 190 VAADVIVLGLVGERGREVREFLDHVLGEAGRRRSVVVVSTSDEPALSRRRAAQASLAIAE 249

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           +F ++G  V L+LDSITR AH+ REI   +GE   AR Y  SVF+ELP LLER GP  + 
Sbjct: 250 HFRAEGRQVFLLLDSITRLAHAQREIGLAAGEPATARSYTPSVFTELPALLERAGPGPEG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA+ +VLVDGD+H++PI+D+VR ILDGHIVL+R + E GR+P +D L SVSR   +
Sbjct: 310 EGDITAIFTVLVDGDDHDEPISDAVRGILDGHIVLDRRIGERGRWPAIDVLRSVSRALPR 369

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             SA+E  L++    L+    +  ++  +G YRPG D  +D A+   P +   L Q   +
Sbjct: 370 CHSAEENALLAEARRLMATHADMAEMIRLGAYRPGSDAGVDAAIAHQPGLEALLAQGVDE 429

Query: 424 LSSE-DVFQEITKKL 437
            SS  + F  +   L
Sbjct: 430 RSSTGEAFARLRASL 444


>gi|163744317|ref|ZP_02151677.1| flagellum-specific ATP synthase [Oceanibulbus indolifex HEL-45]
 gi|161381135|gb|EDQ05544.1| flagellum-specific ATP synthase [Oceanibulbus indolifex HEL-45]
          Length = 446

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 182/441 (41%), Positives = 266/441 (60%), Gaps = 7/441 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ     L   A +  +  +   G + +IT +  T   L + + +G+  +  G +     
Sbjct: 1   MQTLFSELTSFAREAGEAEIT--GEVRAITGITLTAVGLERVLGIGERCIVHGSDGPVHA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ +      + P G    ++ GD V    GR  I P   W GRVI+A   P+DG   L
Sbjct: 59  EVVGLGTHGTELLPFGSWRGVAAGDRVEVAIGRDVIRPDESWKGRVISASAAPLDGKGHL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G+    + +  P A +R+R+     T +R +D+FTPLC GQR+G+FAGSG+GKSTL++
Sbjct: 119 PEGNQPRPLRAAPPGAFDRKRIGPKLATHVRALDVFTPLCQGQRLGIFAGSGVGKSTLMA 178

Query: 180 MFAR-SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
           M AR +DC D V+++LVGERGREV++FI   LG + ++K+V+VVAT DE P+ R+ A  T
Sbjct: 179 MLARYTDC-DVVVMALVGERGREVQDFISSDLGPEGMEKAVLVVATGDEPPLTRRQAAWT 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A+ +AE+F  +G +VLL++DS+TRFA + REI   S E P A+GYP +VFSELP++LER 
Sbjct: 238 AMAVAEHFRDQGQHVLLLMDSVTRFAMAQREIGLASREPPTAKGYPPTVFSELPQMLERA 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP    KG+ITA+ +VLVDGD+ NDPIAD+VR I DGHIVL+R +AE+GRYP +D LASV
Sbjct: 298 GPGPVGKGDITAIFTVLVDGDDMNDPIADAVRGITDGHIVLDRKIAEKGRYPAIDLLASV 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S  E  L+++    +    +  ++  IG YR G +  LD+A+        FL
Sbjct: 358 SRTLPDCHSDAEYTLLTAAHKALAAHADMEELIRIGAYRSGSNPELDRAIAFAGPCEAFL 417

Query: 418 KQSPSDLSSEDV-FQEITKKL 437
            Q  ++ +     F E+   L
Sbjct: 418 SQRKAEHTPPQASFAEVAGML 438


>gi|46201676|ref|ZP_00054580.2| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
           [Magnetospirillum magnetotacticum MS-1]
          Length = 450

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 160/326 (49%), Positives = 223/326 (68%), Gaps = 2/326 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P   W GRVIN  G+P+DG   L  GD++  + ++ P A +R RV      G+R ++ 
Sbjct: 95  VYPDRGWLGRVINGFGEPVDGLGPLPGGDIAYPVKAQPPSAHSRTRVSGKIDLGLRSVNA 154

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F   C GQR+G+FAGSG+GKS+++SM AR+   D  ++ L+GERGRE REFIED LG + 
Sbjct: 155 FLTCCRGQRMGIFAGSGVGKSSIMSMMARNTSADIAVLGLIGERGREAREFIEDDLGPEG 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           +K+SVVVV+TSDESP+LR+ A    +T+AEYF  +G +VL ++DS+TRFA + REI+ ++
Sbjct: 215 MKRSVVVVSTSDESPLLRRQAAYMTLTVAEYFRDQGLDVLCMMDSVTRFAMAQREISLSA 274

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELPRLLER GP    KG+IT + +VLVD D+HN+PIAD+VR ILD
Sbjct: 275 GEPPASKGYTPTVFAELPRLLERAGPGTG-KGSITGLFTVLVDADDHNEPIADAVRGILD 333

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+RS+AE GRYP ++ L SVSR      +  E  LV     L+  +E+  ++  +G
Sbjct: 334 GHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLVRRARALLSTYEDMAELIRLG 393

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            YR G D  +D+A+H  P I  FL Q
Sbjct: 394 AYRRGTDPKVDEAIHYYPAIEAFLGQ 419


>gi|307944615|ref|ZP_07659955.1| flagellar protein export ATPase FliI [Roseibium sp. TrichSKD4]
 gi|307772364|gb|EFO31585.1| flagellar protein export ATPase FliI [Roseibium sp. TrichSKD4]
          Length = 441

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 160/341 (46%), Positives = 224/341 (65%), Gaps = 1/341 (0%)

Query: 87  VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
           V H     + PS  W GRVINA+G+PIDG   L +G+    + +  PPA  R RV     
Sbjct: 84  VIHARESVVHPSDAWLGRVINAMGEPIDGKGELPRGEAPRWMRAAPPPASERARVGPPLD 143

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
            G+R ++ F   C GQR+G+FAGSG+GKS L+SM AR+   D  +I L+GERGREV+EFI
Sbjct: 144 LGVRALNTFVTCCQGQRMGIFAGSGVGKSVLMSMLARNTDCDISVIGLIGERGREVQEFI 203

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           ED LG+  L +SVVVVATSDES ++R+ A    +T+AE+F  +G NVL ++DSITRFA +
Sbjct: 204 EDDLGEEGLARSVVVVATSDESVLMRRQAAYLTMTMAEHFRDEGQNVLCMMDSITRFAMA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            REI  + GE P ++GY  +VF+ELPRLLER GP    KG+IT + +VLV+GDNHN+P+A
Sbjct: 264 QREIGLSIGEPPTSKGYTPTVFTELPRLLERAGPGLVGKGSITGLFTVLVEGDNHNEPVA 323

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+VR ILDGH+V+ RS+AE GRYP ++ L SVSR   +    + + ++     L+  + +
Sbjct: 324 DAVRGILDGHVVMERSIAERGRYPAINVLKSVSRTMPRCVPEEYQPILRKAKQLLSTYTD 383

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             ++  +G YR G D  +D+A+ +   I  FL Q   + +S
Sbjct: 384 MEELIRLGAYRKGSDATVDEAISRFEPIETFLNQRKGEATS 424


>gi|83591865|ref|YP_425617.1| flagellum-specific ATP synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83574779|gb|ABC21330.1| ATPase FliI/YscN [Rhodospirillum rubrum ATCC 11170]
          Length = 475

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 158/330 (47%), Positives = 227/330 (68%), Gaps = 1/330 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I P+  W GRVINA+G+ +DG  +L  G+ ++ I  + P A +RQRV      G+R I+ 
Sbjct: 95  IYPTRDWLGRVINAMGEAVDGKGALPAGERAVAIRGRPPSAHSRQRVGGKLDLGVRAINT 154

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213
           F   C GQR+G+FAGSG+GKS+++SMF R+   D +++ LVGERGRE REFIED LG+  
Sbjct: 155 FLTCCRGQRMGIFAGSGVGKSSVMSMFIRNTNADVIVMGLVGERGREAREFIEDDLGEEG 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK++V VVATSDESP++R+ A    + +AEYF  +G +VL ++DS+TRFA + REI+ ++
Sbjct: 215 LKRAVTVVATSDESPLMRRQAAYMTLAVAEYFRDQGLDVLCLMDSVTRFAMAQREISLSA 274

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELP+LLER GP  +  G+IT + +VLV+GD+HN+PI+D+VR ILD
Sbjct: 275 GEPPASKGYTPTVFAELPKLLERAGPGVEGSGSITGLFTVLVEGDDHNEPISDAVRGILD 334

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R++AE GRYP ++ L SVSR      S  E  LV+    L+  +E   ++  +G
Sbjct: 335 GHIVLDRAIAERGRYPAINILRSVSRTMPGCNSPAENALVAKGRRLMAAYENMAELIRLG 394

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            YR G D   D A+H  P +  FL Q+ ++
Sbjct: 395 AYRKGSDPETDTAIHYHPALDAFLTQAKTE 424


>gi|288962371|ref|YP_003452666.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
 gi|288914637|dbj|BAI76122.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
          Length = 445

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 166/400 (41%), Positives = 247/400 (61%), Gaps = 3/400 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G +++++ +   V  + + + +G   + + ++   +  +V+          P G  + + 
Sbjct: 22  GRVTAVSGLMVEVGGIEKELSVGGRCIVETRDRRRVPCEVVGFRQGRALAMPFGALDGVG 81

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG      G +  I P+  W GRV+NALG+P+DG   L KG     I +  P A +R RV
Sbjct: 82  LGCRALVAGDQAMIYPTDAWLGRVVNALGEPVDGKGPLPKGPQGTPIRNTPPNAHSRARV 141

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    GIR I+ F   C GQR+G+FAGSG+GKS+++SM AR    +  +I L+GERGRE
Sbjct: 142 GEKLDLGIRAINAFLTCCRGQRMGIFAGSGVGKSSVMSMLARFSAAEVAVIGLIGERGRE 201

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           ++EFI + LG+  L +SVVV ATSDE+P++RK A    + +AE+F  +G +VL ++DS+T
Sbjct: 202 LQEFITEDLGEEGLARSVVVCATSDEAPLMRKQAAYMTLAVAEHFRDQGRDVLCMMDSVT 261

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI  ++GE P  +GYP +VF+ELPRLLER GP     G IT + +VLVDGD+H
Sbjct: 262 RFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAGPGVVGSGTITGLFTVLVDGDDH 321

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           N+PIAD+VR ILDGHIV+ R + E GRYP ++ L SVSR      +A+E +LV     L+
Sbjct: 322 NEPIADAVRGILDGHIVMERQIGERGRYPAINILRSVSRTMPGCNTANENELVGHARRLL 381

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   ++  +G YR G D  +D+A+H  P +  FLKQ 
Sbjct: 382 SSYDNMAEMIRLGAYRRGTDPQVDEAIHFQPALEAFLKQG 421


>gi|83309727|ref|YP_419991.1| flagellum-specific ATP synthase [Magnetospirillum magneticum AMB-1]
 gi|82944568|dbj|BAE49432.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Magnetospirillum magneticum AMB-1]
          Length = 450

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 159/333 (47%), Positives = 226/333 (67%), Gaps = 2/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P   W GRVIN  G+P+DG   L  GD +  + ++ P A +R RV      G+R ++ 
Sbjct: 95  VFPDRGWLGRVINGFGEPVDGLGPLPGGDTAYPVKAQPPSAHSRSRVSGKIDLGLRSVNA 154

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F   C GQR+G+FAGSG+GKS+L+SM AR+   D  ++ L+GERGRE REFIED LG + 
Sbjct: 155 FLTCCRGQRMGIFAGSGVGKSSLMSMMARNTSADISVLGLIGERGREAREFIEDDLGPEG 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           +K+SVVVV+TSDESP++R+ A    +T+AE+F  +G +VL ++DS+TRFA + REI+ ++
Sbjct: 215 MKRSVVVVSTSDESPLMRRQAAYMTLTVAEFFRDQGLDVLCMMDSVTRFAMAQREISLSA 274

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELPRLLER GP    KG+IT + +VLVD D+HN+PIAD+VR ILD
Sbjct: 275 GEPPASKGYTPTVFAELPRLLERAGPGVG-KGSITGLFTVLVDADDHNEPIADAVRGILD 333

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+RS+AE GRYP ++ L SVSR      +  E  LV     L+  +E+  ++  +G
Sbjct: 334 GHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLVRRARSLLSTYEDMAELIRLG 393

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YR G D  +D+A+H  P I  FL Q  ++ ++
Sbjct: 394 AYRRGTDPKVDEAIHYYPAIEAFLGQLKTEATT 426


>gi|288962705|ref|YP_003452999.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
 gi|288914971|dbj|BAI76455.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
          Length = 447

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 171/349 (48%), Positives = 231/349 (66%), Gaps = 4/349 (1%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           F + P   W GRV+NALG+PIDG   L  G+    +    P A  R+RV +   +GIRVI
Sbjct: 92  FTLRPGQGWLGRVVNALGEPIDGKGPLANGEHPRALRQPPPAACARRRVGRRIDSGIRVI 151

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D F PLC GQR+GVFAGSG+GKSTLL+M AR    D ++I L+GERGREVREFI+D LG 
Sbjct: 152 DGFVPLCRGQRLGVFAGSGVGKSTLLAMVARHAEADTIVIGLIGERGREVREFIQDDLGP 211

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           + L +SVV+VATSDE P++R+ A L  +T+AE    +G +VL ++DS+TRFA + REI  
Sbjct: 212 EGLARSVVIVATSDEPPLMRRQAALLTMTVAEEMRDQGKHVLCLMDSVTRFAMAQREIGL 271

Query: 272 NSGELPVARGYPTSVFSELPRLLERI--GPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
            +GE P A+ YP SVF+ELPRLLER   GP    +G+ITA+ +VLVDGD+H++PIAD+VR
Sbjct: 272 AAGEPPTAKSYPPSVFAELPRLLERAGPGPEGVGEGDITAIFTVLVDGDDHDEPIADAVR 331

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            ILDGH+VL+R +AE+GRYP V+ L SVSR        +E ++V     L   ++  +++
Sbjct: 332 GILDGHLVLDRGIAEQGRYPAVNLLRSVSRSLPGCHGVEENRIVGRTRALAATYDGMKEM 391

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEITKKL 437
             +G Y+ G D   D A+   P + +FL+Q   D S S D F  +   L
Sbjct: 392 IRLGAYKRGTDPETDAAIDLHPRLEEFLRQGKDDPSPSADSFTRLESLL 440


>gi|83944173|ref|ZP_00956629.1| flagellum-specific ATP synthase [Sulfitobacter sp. EE-36]
 gi|83845040|gb|EAP82921.1| flagellum-specific ATP synthase [Sulfitobacter sp. EE-36]
          Length = 463

 Score =  318 bits (816), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 171/404 (42%), Positives = 247/404 (61%), Gaps = 6/404 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + SIT +  TV+ L     +G             G+V+      + + P G  E +S+
Sbjct: 22  GTVRSITGMTLTVSGLEAMAAIGSQCRVYTPAGHIDGEVVSAQGSDLCVLPFGTWEGVSV 81

Query: 84  G---DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           G   +L+ H     +SP   W G V++ALG+P+       +        +  P A +R++
Sbjct: 82  GNTVELIEH--DDMVSPDDSWIGTVVDALGRPLTQYTRARRPRRKTRFRANPPGAFDRKK 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +  +T I+ IDIFTP+C GQR+GVFAGSG+GKST+++M AR+   D ++I L+GERGR
Sbjct: 140 VGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKSTMMAMLARNTDADVIVIGLIGERGR 199

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV++FI++ LG+  + ++VVVV+T DE+P+LRK A LT   IAEYF S G  VLL+LDS+
Sbjct: 200 EVQQFIQEDLGEEGMARAVVVVSTGDEAPLLRKQAALTTTAIAEYFKSTGKQVLLLLDSV 259

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI    GE P  RGYP SVFSELP LLER GP    +G+IT + +VLVDGD+
Sbjct: 260 TRFAMAQREIGLARGEPPTLRGYPPSVFSELPHLLERAGPGMAAEGDITGLYTVLVDGDD 319

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PIAD+VR I+DGH+VL+R +AE+GR+P +D   S+SR+     S +E ++       
Sbjct: 320 MNEPIADAVRGIVDGHLVLDRRIAEQGRFPAIDLQKSLSRMLPGCHSPEEYEITKVARKA 379

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           + R+ +  D+  +G Y+ G D   D+A+        FL QS  D
Sbjct: 380 LGRYADMEDLIRLGAYKAGSDPETDQAITFFQAASPFLSQSRGD 423


>gi|296283215|ref|ZP_06861213.1| flagellum-specific ATP synthase [Citromicrobium bathyomarinum
           JL354]
          Length = 442

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 162/338 (47%), Positives = 227/338 (67%), Gaps = 3/338 (0%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G+  + P+  W GRV++ LG+P+D    L  G  +    +  P A NR RV +  +TG+R
Sbjct: 89  GQSMLRPTDQWLGRVVDGLGRPMDDKGPLPVGPEARLFKADPPAAANRTRVGRRLETGVR 148

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            +D+F PLC GQR+G+FAGSG+GKSTLLSM AR    D  +I L+GERGREV+EFIED L
Sbjct: 149 SLDLFAPLCRGQRLGLFAGSGVGKSTLLSMLARWVETDIAVIGLIGERGREVQEFIEDDL 208

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G + L +SVVVVATSD   ++R+ A  T + IAE+F   G +V+ ++DS+TRFA + REI
Sbjct: 209 GPEGLARSVVVVATSDSPALMRRQAAWTTLAIAEHFRDAGRDVMCLMDSVTRFAMAQREI 268

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  +GY  +VF+ELPRLLER GP    +G+IT + SVLVDGD+H++PIAD+VR
Sbjct: 269 GLANGEPPATKGYTPTVFAELPRLLERAGPGGPGQGSITGLFSVLVDGDDHDEPIADAVR 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL-VSSLTHLIHRFEETRD 388
            ILDGHIV++R +AE GR+P +D L SVSR+       +E +L +++L HL + + +  +
Sbjct: 329 GILDGHIVMSRKIAERGRFPAIDILKSVSRMLPDCHEEEENRLRLAALRHLSN-YADMEE 387

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +  +G Y+ G D  +D+A+   P I D LKQ   D  S
Sbjct: 388 LVRLGAYKSGSDAEVDEAIRLAPAIEDLLKQRKDDRGS 425


>gi|85713633|ref|ZP_01044623.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A]
 gi|85699537|gb|EAQ37404.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A]
          Length = 441

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 157/350 (44%), Positives = 235/350 (67%), Gaps = 6/350 (1%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ P+A W GRV+NA+G+PIDG   L +G   +   +  PPA +R+RV +    G+R ++
Sbjct: 90  QVRPAASWLGRVLNAMGEPIDGKGPLPQGPAPVPYRNSPPPAHSRKRVGEPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADISVIGLVGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + +AEYF  +G +V+ ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEGQDVMCMMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P  +GY  +VF+ELPRLLER GP   E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 TGEPPTTKGYTPTVFTELPRLLERAGPGSGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ R +AE GRYP ++ L SVSR   K+       +++    ++  + +  ++  +
Sbjct: 329 DGHIVMERVIAERGRYPAINILKSVSRTMPKSADPAFLPVITRARQMMATYSDMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF---QEITKKLQ 438
           G YR G +  +D+A+   P++ DFL+Q+  +++  E+ +   Q+I K L+
Sbjct: 389 GAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTGIEEGYRRLQQIVKTLE 438


>gi|315497639|ref|YP_004086443.1| atpase, flii/yscn family [Asticcacaulis excentricus CB 48]
 gi|315415651|gb|ADU12292.1| ATPase, FliI/YscN family [Asticcacaulis excentricus CB 48]
          Length = 462

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 160/375 (42%), Positives = 236/375 (62%), Gaps = 7/375 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D   + P G  E ++ G ++       ++ PS  W GR+I+A G PIDG   L
Sbjct: 75  EVVGFREDRALMMPFGPVEGVAPGAEIRISNEGAKVYPSTAWLGRIIDAFGDPIDGLGPL 134

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG +   + +  PPA +R RV +    G+R +++FT  C GQR+GVFAGSG+GKS LLS
Sbjct: 135 PKGGIGYPLKAAPPPAHSRARVGERLDLGVRAMNVFTTCCRGQRLGVFAGSGVGKSVLLS 194

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D V++ L+GERGREVREF+E+ LG+  + +++VVVATSDE  + R+ A    
Sbjct: 195 MLAREAACDAVVVGLIGERGREVREFVEETLGEAGISRAIVVVATSDEPALKRRQAAYMT 254

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + ++E+   +G  VL ++DS+TRFA + REI   +GE P  +GY  + F+ELP+LLER G
Sbjct: 255 LALSEFLRDQGLEVLCLMDSVTRFAMAQREIGLATGEPPTTKGYTPTCFAELPKLLERAG 314

Query: 299 PSE-----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           P        + G IT + +VLVDGD+HN+PIAD+VR ILDGHIV++RS+AE GR+P +D 
Sbjct: 315 PGPLLPDGTQTGPITGLFTVLVDGDDHNEPIADAVRGILDGHIVMSRSIAERGRFPAIDV 374

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR      +  E+++V +   ++  +    ++  IG YR G D ++D+A+   P I
Sbjct: 375 LKSISRTMPGCQTLAEREVVRNARAVMSAYTNMEELIRIGAYRTGADPLVDRAIQLNPSI 434

Query: 414 YDFLKQSPSDLSSED 428
             FL QSP + +S D
Sbjct: 435 EQFLSQSPDEATSLD 449


>gi|328542575|ref|YP_004302684.1| H+-transporting two-sector ATPase FliI [polymorphum gilvum
           SL003B-26A1]
 gi|326412321|gb|ADZ69384.1| H+-transporting two-sector ATPase FliI [Polymorphum gilvum
           SL003B-26A1]
          Length = 441

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 155/333 (46%), Positives = 221/333 (66%), Gaps = 1/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GRVINA+G+PIDG  +L  G+    + S  PPA  R RV      G+R ++ 
Sbjct: 92  VHPANAWLGRVINAMGEPIDGKGALPGGETPRRLRSAPPPASERARVGPPLDLGVRALNT 151

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213
           F   C GQR+G+FAGSG+GKS L+SM AR+   D  +I L+GERGREV+EFIED LG+  
Sbjct: 152 FVTCCEGQRMGIFAGSGVGKSVLMSMLARNTDCDVAVIGLIGERGREVQEFIEDDLGEAG 211

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDES ++R+ A   A+T+AE+F  +G  VL ++DS+TRFA + REI  + 
Sbjct: 212 LARSVVVVATSDESVLMRRQAAYLAMTVAEHFRDEGAKVLCMMDSVTRFAMAQREIGLSI 271

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELPRLLER GP     G+IT + +VLV+GDNHN+P+AD+VR ILD
Sbjct: 272 GEPPTSKGYTPTVFTELPRLLERAGPGRVGSGSITGLFTVLVEGDNHNEPVADAVRGILD 331

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GH+V+ RS+AE GRYP ++ L SVSR   +        ++     L+  F +  ++  +G
Sbjct: 332 GHVVMERSIAERGRYPAINVLKSVSRTMPRCVPEPLVPVLRKARQLMATFSDMEELIRLG 391

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YR G D ++D+A+ +   +  FL Q+  + ++
Sbjct: 392 AYRRGSDPVVDEAIARHDALEGFLSQTKDEATA 424


>gi|75674724|ref|YP_317145.1| flagellum-specific ATP synthase [Nitrobacter winogradskyi Nb-255]
 gi|74419594|gb|ABA03793.1| ATPase FliI/YscN [Nitrobacter winogradskyi Nb-255]
          Length = 441

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 158/347 (45%), Positives = 234/347 (67%), Gaps = 11/347 (3%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+A W GRV+NALG+PIDG   L +G   +   +  P A +RQRV +     +R ++ 
Sbjct: 91  VRPAAAWLGRVLNALGEPIDGKGPLPQGPTPVPYRNSPPSAHSRQRVGQPLDLKVRALNT 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213
           F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I L+GERGREV+EF++D LGD  
Sbjct: 151 FLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADVSVIGLIGERGREVQEFLQDDLGDEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDE  ++R+ A    + IAE+F  +G +V+ ++DS+TRFA + REI  ++
Sbjct: 211 LARSVVVVATSDEPALMRRQAAYLTLAIAEFFRDEGRDVMCMMDSVTRFAMAQREIGLST 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GY  +VF+ELPRLLER GP   +KG IT + +VLVDGD+HN+P+AD+VR ILD
Sbjct: 271 GEPPTTKGYTPTVFTELPRLLERAGPG-ADKGTITGIFTVLVDGDDHNEPVADAVRGILD 329

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRL----ADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           GHIV+ R++AE GRYP ++ L SVSR     AD A+  D    ++    ++  + +  ++
Sbjct: 330 GHIVMERAIAERGRYPAINILKSVSRTMPRSADPAFLPD----ITCARRMMATYSDMEEL 385

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435
             +G YR G +  +D+A+   P++ DFL+Q+  +++S ED ++ + +
Sbjct: 386 IRLGAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTSIEDGYRRLQQ 432


>gi|91978136|ref|YP_570795.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB5]
 gi|91684592|gb|ABE40894.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB5]
          Length = 441

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 155/334 (46%), Positives = 225/334 (67%), Gaps = 2/334 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRVINALG+PIDG   L +G   M   +  PPA +R+RV      G+R ++
Sbjct: 90  QVRPSPAWLGRVINALGEPIDGKGPLPQGASPMPFRNSPPPAHSRKRVGAPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+      +I L+GERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    ++IAEYF  +G +VL ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLSIAEYFRDEGKDVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP  +E G I+ + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLRE-GTISGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ RS+AE GRYP ++ L SVSR   ++       ++     ++  + +  ++  +
Sbjct: 329 DGHIVMQRSIAERGRYPAINVLKSVSRTMPRSADPAYLPVIKRARQVMATYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G YRPG  + +D+AV     + +FL+Q+  + +S
Sbjct: 389 GAYRPGSSVEVDEAVRLHEPLEEFLRQAKDEATS 422


>gi|254473200|ref|ZP_05086598.1| flagellar-specific H(+)-transporting ATP synthase [Pseudovibrio sp.
           JE062]
 gi|211957921|gb|EEA93123.1| flagellar-specific H(+)-transporting ATP synthase [Pseudovibrio sp.
           JE062]
          Length = 373

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/340 (45%), Positives = 225/340 (66%), Gaps = 3/340 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS+ W GRV+NALG+PIDG   L  G +  ++    PPA  R RV      G+R ++ 
Sbjct: 24  VHPSSGWLGRVVNALGEPIDGKGPLPFGSIPRKLRDSPPPAAERARVGGPIDLGVRSLNS 83

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213
           F   C GQR+G+FAGSG+GKS L+SM AR+   +  +I L+GERGREV+EFIED LG+  
Sbjct: 84  FVTCCQGQRLGIFAGSGVGKSVLMSMLARNAETEVSVIGLIGERGREVQEFIEDDLGEEG 143

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L KSVVVVATSDES ++R+ A    +T++EYF  +G NVL ++DS+TRFA + REI  + 
Sbjct: 144 LAKSVVVVATSDESVLMRREAAYLTLTLSEYFRDEGKNVLCMMDSVTRFAMAQREIGLSV 203

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P ++GY  +VF+ELP+LLER GP    KG++TA+ +VLV+GDNHN+P+AD+VR ILD
Sbjct: 204 GEPPTSKGYTPTVFTELPKLLERAGPGAVGKGSVTALFTVLVEGDNHNEPVADAVRGILD 263

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV+ R +AE GRYP ++ L SVSR   +    +   ++     L+  + +  ++  +G
Sbjct: 264 GHIVMERQIAERGRYPAINVLKSVSRTMPRCVPEEALPILRRAKQLMSAYADMEELIRLG 323

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS--EDVFQ 431
            Y+ G D ++D+A+ +   +  +L Q   + ++  E  FQ
Sbjct: 324 AYKEGADPLVDEAIAKYDALEAYLGQMKGEKTTIEEGYFQ 363


>gi|83955127|ref|ZP_00963783.1| Flagellum-specific ATP synthase [Sulfitobacter sp. NAS-14.1]
 gi|83840456|gb|EAP79629.1| Flagellum-specific ATP synthase [Sulfitobacter sp. NAS-14.1]
          Length = 434

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 234/365 (64%), Gaps = 6/365 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           G+V+      + + P G  E +S+G   +L+ H     +SP   W G V++ALG+P+   
Sbjct: 29  GEVVSAQGSDLCVLPFGTWEGVSVGNTVELIEH--DDMVSPDDSWIGTVVDALGRPLTQY 86

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
               +        +  P A +R++V +  +T I+ IDIFTP+C GQR+GVFAGSG+GKST
Sbjct: 87  TRARRPRRKTRFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKST 146

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAP 235
           +++M AR+   D ++I L+GERGREV++FI++ LG+  + ++VVVV+T DE+P+LRK A 
Sbjct: 147 MMAMLARNTDADVIVIGLIGERGREVQQFIQEDLGEEGMARAVVVVSTGDEAPLLRKQAA 206

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT   IAEYF S G  VLL+LDS+TRFA + REI    GE P  RGYP SVFSELP LLE
Sbjct: 207 LTTTAIAEYFKSTGKQVLLLLDSVTRFAMAQREIGLARGEPPTLRGYPPSVFSELPHLLE 266

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R GP    +G+IT + +VLVDGD+ N+PIAD+VR I+DGH+VL+R +AE+GR+P +D   
Sbjct: 267 RAGPGMAAEGDITGLYTVLVDGDDMNEPIADAVRGIVDGHLVLDRRIAEQGRFPAIDLQK 326

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+     S +E ++       + R+ +  D+  +G Y+ G D   D+A+        
Sbjct: 327 SLSRMLPGCHSPEEYEISKVARKALGRYADMEDLIRLGAYKAGSDPETDQAITFFRAASP 386

Query: 416 FLKQS 420
           FL QS
Sbjct: 387 FLSQS 391


>gi|39934703|ref|NP_946979.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009]
 gi|192290219|ref|YP_001990824.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris TIE-1]
 gi|39648553|emb|CAE27074.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009]
 gi|192283968|gb|ACF00349.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris
           TIE-1]
          Length = 441

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 165/381 (43%), Positives = 236/381 (61%), Gaps = 3/381 (0%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVI 106
            VV  G N +   +VI    +   + P    E +  G   +      ++ PS  W GRV+
Sbjct: 43  IVVETGANREIPCEVIGFTGNNAIVMPFAGLEGVRRGCRAIIANSAAQVRPSPHWLGRVV 102

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           NALG+PIDG   L +G   M+  ++ PPA +R+RV      G+R ++ F   C GQR+G+
Sbjct: 103 NALGEPIDGKGPLVQGPSPMQFRNQPPPAHSRKRVGMPLDLGVRALNTFLTCCRGQRMGI 162

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225
           FAGSG+GKS LLSM AR+      +I L+GERGREV+EF++D LG + L +SVVVVATSD
Sbjct: 163 FAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSD 222

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           E  ++R+ A    + IAEYF     +VL ++DS+TRFA + REI  ++GE P A+GY  +
Sbjct: 223 EPALMRRQAAYLTLAIAEYFRDNDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPT 282

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF+ELP+LLER GP   E G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ RS+AE 
Sbjct: 283 VFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRSIAER 341

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           GRYP ++ L SVSR   K+       ++     ++  + +  ++  +G YRPG    +D+
Sbjct: 342 GRYPAINVLKSVSRTMPKSADPVYLPMIKRARQIMATYADMEELIRLGAYRPGSSAEVDE 401

Query: 406 AVHQVPIIYDFLKQSPSDLSS 426
           AV     + DFL+Q   + +S
Sbjct: 402 AVRLHEPLEDFLRQGKDEATS 422


>gi|209965046|ref|YP_002297961.1| flagellum-specific ATP synthase [Rhodospirillum centenum SW]
 gi|209958512|gb|ACI99148.1| H+-transporting two-sector ATPase FliI [Rhodospirillum centenum SW]
          Length = 447

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 159/367 (43%), Positives = 231/367 (62%), Gaps = 3/367 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+        + P G  ++I LG       G+  I+P+  W GRV+NALG+PIDG   L
Sbjct: 60  EVVGFRAGKALLMPFGTLDDIGLGCRAEVAEGQPAITPTTGWLGRVVNALGEPIDGKGPL 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G     I +  PPA  R+RV      G+R I+ F   C GQR+G+FAGSG+GKS L+S
Sbjct: 120 PQGPRPTPIRASPPPAHARRRVGGKIDLGVRAINTFLTCCKGQRMGIFAGSGVGKSVLMS 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M A+       +I L+GERGREV+EF+E  LG + L +SVVVVATSDE P++R+ A    
Sbjct: 180 MLAKYTAAQVSVIGLIGERGREVQEFLEADLGPEGLARSVVVVATSDEPPLMRRQAAYMT 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + +AE+F  +G +VL ++DS+TRFA + REI  ++GE P  +GYP +VF+ELPRLLER G
Sbjct: 240 MAVAEFFRDEGQDVLCLMDSVTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P   E G I+ + +VLV+G +  +PIAD+VR ILDGHIV+ R + E GRYP ++ L SVS
Sbjct: 300 PGTGE-GTISGLFTVLVEGGDMEEPIADAVRGILDGHIVMERRIGERGRYPAINILRSVS 358

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R      + ++  LV+    L+  + +  ++  +G YR G D ++D+A+H  P + +FL+
Sbjct: 359 RTMPGCNTEEQNLLVTRARRLMAAYADMEEMIRLGAYRRGSDSMVDEAIHFQPALENFLR 418

Query: 419 QSPSDLS 425
           Q   + S
Sbjct: 419 QGKDERS 425


>gi|220923531|ref|YP_002498833.1| flagellum-specific ATP synthase [Methylobacterium nodulans ORS
           2060]
 gi|219948138|gb|ACL58530.1| ATPase FliI/YscN [Methylobacterium nodulans ORS 2060]
          Length = 453

 Score =  309 bits (791), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 161/333 (48%), Positives = 219/333 (65%), Gaps = 2/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I PS  W GRVI+ALG+PIDG   L  G ++  + +  PPA  R+RV      G+R I+ 
Sbjct: 107 IRPSRAWLGRVIDALGRPIDGLGPLPPGPVAYPLQTDPPPAHARRRVGPPLDLGVRCINT 166

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F  LC GQR+G+FAGSG+GKS LLSM ARS   D  +I LVGERGREV+EF++D LG + 
Sbjct: 167 FLTLCRGQRMGIFAGSGVGKSVLLSMLARSAASDVAVIGLVGERGREVQEFLQDDLGPEG 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDE  ++R+ A    + +AE+F  +G  VL ++DSITRFA + R++   +
Sbjct: 227 LARSVVVVATSDEPALMRRNAAYATLALAEHFRDEGAQVLCMIDSITRFAMAQRDVGLAA 286

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P A+GY  +VFSELPRLLER GP   E G I+ + +VLV+GD+HN+P+AD+VR ILD
Sbjct: 287 GEPPTAKGYTPTVFSELPRLLERAGPGTGE-GMISGLFTVLVEGDDHNEPVADAVRGILD 345

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV+ R +AE GRYP ++ L SVSR   +A       +V    HL+    +  ++  +G
Sbjct: 346 GHIVMERRIAERGRYPAINVLRSVSRTMPRACDPAFLPVVQRARHLMSTHADMEELIRLG 405

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YR G    +D+AV  +P +  FL QS  + +S
Sbjct: 406 AYRAGSSPEVDEAVALMPDLEAFLGQSKEEATS 438


>gi|152965619|ref|YP_001361403.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216]
 gi|151360136|gb|ABS03139.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216]
          Length = 453

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 157/327 (48%), Positives = 218/327 (66%), Gaps = 4/327 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ALG P+DG   L        + +  PPAM R RV+     G+R +D   P  
Sbjct: 110 ALLGRVVDALGNPLDGGPPLHTAPRG-PLHATPPPAMTRGRVDAPLSLGVRALDTLVPAG 168

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR G+FAGSG+GKS+LLSM AR    D  +++LVGERGREVREF+ED LG + L +SV
Sbjct: 169 RGQRFGIFAGSGVGKSSLLSMIARGTSADVSVLALVGERGREVREFLEDDLGPEGLARSV 228

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV+ATSDE+P+LR  A LTA T+AE F   G + +L++DS+TR A + REI  + GE P 
Sbjct: 229 VVIATSDEAPVLRLRASLTATTVAESFRDMGADCVLMMDSLTRVAMAQREIGLSVGEPPA 288

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP SVF+ +PRLLER GP     G+IT + +VLVDGD+HN+PIAD+ RSILDGH+VL
Sbjct: 289 TRGYPPSVFALMPRLLERAGPGVT--GSITGIYTVLVDGDDHNEPIADNARSILDGHVVL 346

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA  G +P +D L SVSR+A +  + ++K   ++L  ++    + +++  +G Y+PG
Sbjct: 347 DRRLATAGHFPTIDVLESVSRVAGRVTTPEQKSAATALRRVMAAHRDAKELIDVGAYQPG 406

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425
            +  +D AV Q+P I  FL+Q   D++
Sbjct: 407 ANPEVDAAVAQLPAINAFLRQDIHDIT 433


>gi|90425705|ref|YP_534075.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB18]
 gi|90107719|gb|ABD89756.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18]
          Length = 441

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/334 (45%), Positives = 220/334 (65%), Gaps = 2/334 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRV+NA+G+PIDG   L +G   M   +  PPA +R+RV      G+R ++
Sbjct: 90  QVRPSPSWLGRVLNAMGEPIDGKGPLTQGTSPMTFRNAPPPAHSRKRVGAPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212
            F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGERGREV+EF++D LGD 
Sbjct: 150 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDADVSVIGLVGERGREVQEFLQDDLGDE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            + +SVVVVATSDE  ++R+ A    + I+EYF   G +VL ++DS+TRFA + REI  +
Sbjct: 210 GMARSVVVVATSDEPALMRRQAAYLTLAISEYFRDDGKDVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLNE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ R++AE GRYP ++ L SVSR   K+       ++     ++  + +  ++  +
Sbjct: 329 DGHIVMERAIAERGRYPAINILKSVSRTMPKSADPAYLPIIRRARQIMGTYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G YR G    +D+A+     + DFL+Q   + ++
Sbjct: 389 GAYRAGSSPEVDEAIRLHQPLEDFLRQGKEEATA 422


>gi|115526263|ref|YP_783174.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisA53]
 gi|115520210|gb|ABJ08194.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris
           BisA53]
          Length = 441

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/334 (45%), Positives = 223/334 (66%), Gaps = 2/334 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PSA W GRV+NA+G+PIDG   L +G   M+  +  PPA +R+RV      G+R ++
Sbjct: 90  QVRPSAAWLGRVLNAMGEPIDGKGPLSQGPSPMQFRNAPPPAHSRKRVGAPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDADVSVIGLVGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + IAEYF  +  +VL ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAIAEYFRDEEKDVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP  +E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLRE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ R++AE GRYP ++ L SVSR   K+       ++     ++  + +  ++  +
Sbjct: 329 DGHIVMERAIAERGRYPAINILKSVSRTMPKSADPAYLPIIKRARQIMGTYSDMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G YR G    +D+++     + ++L+Q   + +S
Sbjct: 389 GAYRAGSSPEVDESIQLHEPLENYLRQGKGEATS 422


>gi|126730140|ref|ZP_01745952.1| H+-transporting two-sector ATPase, flagellum-specific [Sagittula
           stellata E-37]
 gi|126709520|gb|EBA08574.1| H+-transporting two-sector ATPase, flagellum-specific [Sagittula
           stellata E-37]
          Length = 458

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 174/412 (42%), Positives = 252/412 (61%), Gaps = 5/412 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++++      V+ LS+   +GD + ++ G ++   G+V+RI  D+V + P  + E +S
Sbjct: 22  GRVTAVDGTTIWVSGLSEVASIGDRLRLYHGAHTLG-GEVLRIRNDLVAMLPDEVAEGVS 80

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
            GD V   G   ++P   W GRVI+A G+P+DG   LG G       +  PPA  R+R+ 
Sbjct: 81  KGDRVAVLGPPTLAPCDSWIGRVIDAYGQPLDGA-PLGPGLKRRPFRASPPPAAARRRLG 139

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
               TG+ V D   P+  GQRIG+FAGSG+GKS LL+  A+    D V+++LVGERGREV
Sbjct: 140 PRLSTGLSVFDTLLPIAQGQRIGLFAGSGVGKSRLLAQLAQGMQADVVVLALVGERGREV 199

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            +F+   LG + +K+S+VV ATSD SP+ R+  PL A+TIAE+F  +G +VL + DSITR
Sbjct: 200 LDFVTKVLGPEGMKRSIVVAATSDRSPLERRRCPLAAMTIAEHFRDQGKHVLYMADSITR 259

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+A  SGELP  RG+P SV  ++ RL ER G      G+ITAV+SVLV G +  
Sbjct: 260 FAEAHREVAIASGELPALRGHPPSVAHQIMRLAERAGCGVDGSGDITAVLSVLVAGSDME 319

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD +R +LDGH+VL+R +AE GR+P +D L SVSR   +A +  E  L+  +  L+ 
Sbjct: 320 EPIADILRGVLDGHVVLDRQIAERGRFPAIDLLRSVSRSLPEAATEPENVLIGDVRQLLG 379

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            +  +  +   G YR G D ILD+AV     + DFL ++ S    +  FQ +
Sbjct: 380 SYARSETMIRAGLYREGEDPILDQAVRAWADLDDFLAEA-SPAGPQRAFQRL 430


>gi|316935199|ref|YP_004110181.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris DX-1]
 gi|315602913|gb|ADU45448.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris DX-1]
          Length = 441

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 156/334 (46%), Positives = 220/334 (65%), Gaps = 2/334 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRV+NALG+PIDG   L +G   M   ++ PPA +R+RV      G+R ++
Sbjct: 90  QVRPSPHWLGRVVNALGEPIDGKGPLVQGPSPMPFRNQPPPAHSRKRVGAPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+      +I L+GERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + IAEYF     +VL ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAIAEYFRDNDKDVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ R++AE GRYP ++ L SVSR   K+       L+     ++  + +  ++  +
Sbjct: 329 DGHIVMQRAIAERGRYPAINVLKSVSRTMPKSADPVYLPLIKRARQIMATYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G YRPG    +D+AV     + DFL+Q   + +S
Sbjct: 389 GAYRPGSSAEVDEAVRLHEPLEDFLRQGKDEATS 422


>gi|218288297|ref|ZP_03492596.1| flagellar protein export ATPase FliI [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241656|gb|EED08829.1| flagellar protein export ATPase FliI [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 441

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 176/405 (43%), Positives = 245/405 (60%), Gaps = 7/405 (1%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRF 93
           T+  +     LG+        S+ LG+VI  +   +Y+ P+G   E+S G  V F   +F
Sbjct: 34  TLEVVGPTASLGELCALGRDTSEGLGEVIGFHEGRLYVVPLGPLPEVSPGTPVRFLERQF 93

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI       GRV+N LG+PID    L    +   + +     + R R+   + TG+R ID
Sbjct: 94  RIRCGPGLVGRVLNGLGEPIDDRGHLDGPLVWRTVDAPAISPLRRGRISSPYATGVRAID 153

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212
               +  GQR+G+FAGSG+GKSTLLSM AR    D  +I+LVGERGREVREF+ED LG+ 
Sbjct: 154 ALLTIGRGQRVGLFAGSGVGKSTLLSMMARGGRADVHVIALVGERGREVREFLEDDLGEE 213

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            +++SVV+VATSDE   +R  A   A  IAEYF  +G +V L++DS+TRFA + RE+   
Sbjct: 214 GMRRSVVIVATSDEPAYVRSKASFVATAIAEYFRDEGMHVTLMMDSLTRFAMAEREVGLA 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE P +RGY  SVF++LP LLER GP     G ITAV +VLV+GD+ NDPIAD+VR IL
Sbjct: 274 MGEPPSSRGYTPSVFAKLPVLLERAGPGPV--GAITAVYTVLVEGDDLNDPIADAVRGIL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIVL+RSLA  G++P +D L S+SRL       D ++    +   + R+ E  D+  I
Sbjct: 332 DGHIVLSRSLANRGQFPAIDVLQSLSRLFPSIADEDHRRAAERVREWMARYGEIEDLFRI 391

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           G YR G D  +D+A+ ++P I +FL+Q   +  +   F+E   +L
Sbjct: 392 GAYRQGTDPAVDEAIQRMPEILEFLRQKKGETVA---FEEAITQL 433


>gi|258511374|ref|YP_003184808.1| ATPase, FliI/YscN family [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478100|gb|ACV58419.1| ATPase, FliI/YscN family [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 441

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 178/423 (42%), Positives = 254/423 (60%), Gaps = 9/423 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           ++LV + G +  +  + + +        LG+        S+ LG+VI  +   +Y+ P+G
Sbjct: 18  RHLVRRAGRVMRV--IGHMLEVAGPTASLGELCALGRDASEGLGEVIGFHEGRLYVVPLG 75

Query: 77  IGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
              E+S G  V F   +FRI       GRV+N LG+PID    L    +   + +     
Sbjct: 76  PLPEVSPGTPVRFLERQFRIRCGPGLVGRVLNGLGEPIDDRGPLEGPLVWRTVDAPAISP 135

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R R+   + TG+R ID    +  GQR+G+FAGSG+GKSTLLSM AR    D  +I+LV
Sbjct: 136 LRRGRISSPYATGVRAIDALLTIGRGQRVGLFAGSGVGKSTLLSMMARGGRADVHVIALV 195

Query: 196 GERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+ED LG+  +++SVV+VATSDES  +R  A   A  IAE+F  +G +V L
Sbjct: 196 GERGREVREFLEDDLGEEGMRRSVVIVATSDESAYVRSKAAFVATAIAEHFRDEGMHVTL 255

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + RE+    GE P +RGY  SVF++LP LLER GP     G ITAV +VL
Sbjct: 256 MMDSLTRFAMAEREVGLAMGEPPSSRGYTPSVFAKLPVLLERAGPGPV--GAITAVYTVL 313

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ NDPIAD+VR ILDGHIVL+RSLA  G++P +D L S+SRL       D ++   
Sbjct: 314 VEGDDLNDPIADAVRGILDGHIVLSRSLANRGQFPAIDVLQSLSRLFPSIADEDHRRAAE 373

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + R+ E  D+  IG YR G D  +D+A+ ++P I +FL+Q   +  +   F+E  
Sbjct: 374 RVREWMARYGEIEDLFRIGAYRQGTDPAVDEAIQRMPEILEFLRQKKGETVA---FEEAI 430

Query: 435 KKL 437
            +L
Sbjct: 431 TQL 433


>gi|295690883|ref|YP_003594576.1| ATPase, FliI/YscN family [Caulobacter segnis ATCC 21756]
 gi|295432786|gb|ADG11958.1| ATPase, FliI/YscN family [Caulobacter segnis ATCC 21756]
          Length = 467

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/351 (43%), Positives = 222/351 (63%), Gaps = 7/351 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR+INA G+PIDG   L +G++   + +  PPA  R RV +    G+R +++
Sbjct: 114 VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTAPPPAHARGRVGERLDLGVRSMNV 173

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGREVREF+E+ LG + 
Sbjct: 174 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFVEETLGEEG 233

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+++VVVVATSDE  + R+ A    + I+EY   +   VL ++DS+TRFA + REI   +
Sbjct: 234 LRRAVVVVATSDEPALTRRQAAYMTLAISEYMRDQDQEVLCLMDSVTRFAMAQREIGLAA 293

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VF+ELP+LLER GP            ITA+ +VLVDGD+HN+PIAD+ 
Sbjct: 294 GEPPTTKGYTPTVFTELPKLLERAGPGPIRADGTTAAPITALFTVLVDGDDHNEPIADAT 353

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV+ R++AE GR+P ++ L S+SR         E+ +V     ++  +    +
Sbjct: 354 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQLPHERDIVKGARQVMAAYSNMEE 413

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           +  IG YR G D ++D+A+   P I  FL Q   + +S +D F  + + LQ
Sbjct: 414 LIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGLLGQILQ 464


>gi|254294575|ref|YP_003060598.1| flagellum-specific ATP synthase [Hirschia baltica ATCC 49814]
 gi|254043106|gb|ACT59901.1| ATPase, FliI/YscN family [Hirschia baltica ATCC 49814]
          Length = 495

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 160/347 (46%), Positives = 224/347 (64%), Gaps = 7/347 (2%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S  W GRV++A G P+DG   L +G +S +I +  P A +R RV +    G+R +D F P
Sbjct: 108 SNSWLGRVVDAFGAPVDGGLPLAQGSISRQIKAVPPAAHSRARVSEPMSLGVRALDGFAP 167

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
              GQR+G+FAGSG+GKSTL+SM AR+   D V+I L+GERGREVREF+ED LG + L +
Sbjct: 168 CAVGQRMGLFAGSGVGKSTLMSMLARNAQADVVVIGLIGERGREVREFVEDTLGIEGLAR 227

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVV ATSDE+   R+ A    + +AE+F  +G  VL +LDS+TRFA + REI   +GE 
Sbjct: 228 SVVVSATSDETAPRRRRAAWMTMAVAEHFRDQGYKVLCLLDSVTRFAMAQREIGLAAGEP 287

Query: 277 PVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           P  +GY  SVFSELP+LLER GP +     + +G IT + +VLVDGD+HN+P+AD+VR I
Sbjct: 288 PTTKGYTPSVFSELPKLLERAGPGKIVPAGQPQGQITGLFTVLVDGDDHNEPVADAVRGI 347

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIV++R +AE GRYP +D L S+SRLA   ++ +  ++      L+  + +  ++  
Sbjct: 348 LDGHIVMDRKIAERGRYPAIDVLKSLSRLASHLYTPETAEIARQARRLMSLYSDMEELVR 407

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEITKKL 437
           IG Y  G D  +D+AV   P I   L Q  ++ S  E+ F  + + L
Sbjct: 408 IGAYARGADPEVDRAVQLSPDIEKILTQHVNENSPPEETFAMLAQVL 454


>gi|299134364|ref|ZP_07027557.1| ATPase, FliI/YscN family [Afipia sp. 1NLS2]
 gi|298591111|gb|EFI51313.1| ATPase, FliI/YscN family [Afipia sp. 1NLS2]
          Length = 441

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 153/333 (45%), Positives = 223/333 (66%), Gaps = 2/333 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRV+NA+G PIDG   + +G   M   +  PPA +R+RV +    G+R ++
Sbjct: 90  QVRPSPAWLGRVVNAMGDPIDGKGPIEQGASPMPFRNLPPPAHSRKRVGQPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGERGREV+EF++D LG +
Sbjct: 150 TFLTCCSGQRMGIFAGSGVGKSVLLSMLARNVDADISVIGLVGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + I+EYF  +G NVL ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGQNVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ RS+AE GRYP ++ L SVSR   K+   +   ++     ++  + +  ++  +
Sbjct: 329 DGHIVMERSIAERGRYPAINILKSVSRTMPKSADPEFLPVIMRGRQVMATYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           G YR G    +D+A+     + +FL+Q+ ++ +
Sbjct: 389 GAYRAGSSAEVDEAIRLHEPLENFLRQAKNEAT 421


>gi|1938379|gb|AAC45616.1| FliI [Caulobacter crescentus CB15]
          Length = 444

 Score =  306 bits (783), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 7/351 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR+INA G+PIDG   L +G++   + +  PPA  R RV +    G+R +++
Sbjct: 91  VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTAPPPAHARGRVGERLDLGVRSMNV 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGREVREF+E+ LG + 
Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFVEETLGEEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+++VVVVATSDE  + R+ A    + I+E+   +   VL ++DS+TRFA + REI   +
Sbjct: 211 LRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQEVLCLMDSVTRFAMAQREIGLAA 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VF+ELP+LLER GP            ITA+ +VLVDGD+HN+PIAD+ 
Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVLVDGDDHNEPIADAT 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV+ R++AE GR+P ++ L S+SR         E+ +V     ++  +    +
Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVKGARQVMSAYSNMEE 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           +  IG YR G D ++D+A+   P I  FL Q   + +S +D F  + + LQ
Sbjct: 391 LIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGMLGQILQ 441


>gi|162147452|ref|YP_001601913.1| flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786029|emb|CAP55611.1| Flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 455

 Score =  306 bits (783), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 174/414 (42%), Positives = 251/414 (60%), Gaps = 20/414 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G ++ ++ +  +++ L  +  +GD V      G+ +D    ++  +++   I P G  E 
Sbjct: 19  GRVTGLSGLTVSLSGLRDFTGVGDRVTIFGLDGRETD--ADILPFHINTAIIMPYGSLEG 76

Query: 81  ISLG-----DLVFHWGRFRISPSA-----CWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           I  G      L     R R +         W GRVI+ +G+PIDG   L    +  ++ +
Sbjct: 77  IGSGCRAMFQLFDPEQRRRRAGGTLVVNDAWQGRVIDPMGRPIDGKGPLPPDGVPQKLHA 136

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P A  R R+      G+RV+++F     GQR+G+FAGSG+GKSTL+ M AR+   D  
Sbjct: 137 PPPEAALRARLGPRIDLGVRVLNLFATCREGQRLGLFAGSGVGKSTLMGMLARNTDCDVA 196

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+LVGERGREVREF+ED LG + L KSVVVVATSD SP++R+ A   A   AE+F  +G
Sbjct: 197 VIALVGERGREVREFVEDDLGPEGLAKSVVVVATSDTSPLMRREAAYAATAAAEHFRDQG 256

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS----EKEKG 305
            +VLL++DS+TRF  ++REI  +SGE P  RGYP SVF+ELPRLLER GP     + + G
Sbjct: 257 KSVLLLMDSVTRFCQALREIGLSSGEPPATRGYPPSVFAELPRLLERAGPGLPGPDGKAG 316

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
            ITA+ SVLV+GD+HN+P+AD+VR ILDGH+V+ R +AE GRYP ++ L S+SR      
Sbjct: 317 QITAMFSVLVEGDDHNEPVADAVRGILDGHVVMERRIAESGRYPAINVLRSLSRTVPGCN 376

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           SA+E  L       +  +EE +D+  +G YR G D  +D+A+   P I + L+Q
Sbjct: 377 SAEENALTRDARADLSTWEEMQDMVRLGAYRAGNDPKVDQAIRIAPAIEEILRQ 430


>gi|126738584|ref|ZP_01754289.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. SK209-2-6]
 gi|126720383|gb|EBA17089.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. SK209-2-6]
          Length = 442

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 165/405 (40%), Positives = 252/405 (62%), Gaps = 3/405 (0%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPV 75
           + LV Q G ++ IT     ++ L ++  +GD +V Q    D+L G+V++I++  + + P 
Sbjct: 15  RKLVTQMGRVTGITGGEIEISGLEKHARIGDRLVLQRGPKDHLHGEVLKIDVSKISMLPD 74

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
              + +++GD V        +PS  W GRVI+  G+P+DG   L +G  + ++M+  P A
Sbjct: 75  RAPDRVAIGDRVLLHPAADFAPSDNWVGRVIDPFGEPLDGRPML-RGSEARDLMAPPPKA 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R+++     TG+ V++   P+  GQR+G+FAGSG+GKSTLL+  A+S   D V+++L+
Sbjct: 134 AGRRQMGARLATGLSVLNTILPVVQGQRVGLFAGSGVGKSTLLAKLAQSMEADVVVMALI 193

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV  F+E+ LG + +K+++VV ATSD+S ++R+    +A+TIAE+F  +G NVL 
Sbjct: 194 GERGREVNHFVEEVLGPEGMKRAIVVAATSDQSALVRRRCAWSAMTIAEHFRDQGKNVLF 253

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           + DS+TRFA + REIA  SGE P  RGYP SV   +  L ER GP  +  G+ITAV SVL
Sbjct: 254 MADSVTRFAEAHREIAAASGEAPALRGYPPSVTPLITGLCERAGPGAEGHGDITAVFSVL 313

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V G +  +PIAD +R +LDGHIVLNR +AE GR+P +D   SVSR    A + DE  ++ 
Sbjct: 314 VAGSDMEEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVSRSLPAAATDDENAMIL 373

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   +  +E++  +   G Y  G DL+LD+AV   P +  F  +
Sbjct: 374 EVRKYLGSYEQSEVMIRAGLYSEGNDLVLDQAVKLWPELDSFFGK 418


>gi|209545561|ref|YP_002277790.1| flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533238|gb|ACI53175.1| ATPase, FliI/YscN family [Gluconacetobacter diazotrophicus PAl 5]
          Length = 455

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 174/414 (42%), Positives = 249/414 (60%), Gaps = 20/414 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G ++ ++ +  +++ L  +  +GD V      G+ +D   +++    D     P G  E 
Sbjct: 19  GRVTGLSGLTVSLSGLRDFTGVGDRVAIFGLDGRETD--AEIVAFRGDTAIAMPYGSLEG 76

Query: 81  ISLG-----DLVFHWGRFRISPSA-----CWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           I  G      L     R R +         W GRVI+ +G+PIDG   L    +  ++ +
Sbjct: 77  IGSGCRAMFQLFDPEQRRRRAGGTLVVNDAWQGRVIDPMGRPIDGKGPLPPDGVPQKLHA 136

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P A  R R+      G+RV+++F     GQR+G+FAGSG+GKSTL+ M AR+   D  
Sbjct: 137 PPPEAALRARLGPRIDLGVRVLNLFATCREGQRLGLFAGSGVGKSTLMGMLARNTDCDVA 196

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+LVGERGREVREF+ED LG + L KSVVVVATSD SP++R+ A   A   AE+F  +G
Sbjct: 197 VIALVGERGREVREFVEDDLGPEGLAKSVVVVATSDTSPLMRREAAYAATAAAEHFRDQG 256

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS----EKEKG 305
            +VLL++DS+TRF  ++REI  +SGE P  RGYP SVF+ELPRLLER GP     + + G
Sbjct: 257 KSVLLLMDSVTRFCQALREIGLSSGEPPATRGYPPSVFAELPRLLERAGPGLPGPDGKAG 316

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
            ITA+ SVLV+GD+HN+P+AD+VR ILDGH+V+ R +AE GRYP ++ L S+SR      
Sbjct: 317 QITAMFSVLVEGDDHNEPVADAVRGILDGHVVMERRIAESGRYPAINVLRSLSRTVPGCN 376

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           SA+E  L       +  +EE +D+  +G YR G D  +D+A+   P I + L+Q
Sbjct: 377 SAEENALTRDARADLSTWEEMQDMVRLGAYRAGNDPKVDQAIRIAPAIEEILRQ 430


>gi|86751019|ref|YP_487515.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris HaA2]
 gi|86574047|gb|ABD08604.1| ATPase FliI/YscN [Rhodopseudomonas palustris HaA2]
          Length = 441

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/334 (45%), Positives = 221/334 (66%), Gaps = 2/334 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRVINALG+PIDG   L +G   M   +  PPA +R+RV      G+R ++
Sbjct: 90  QVRPSQAWLGRVINALGEPIDGKGPLPQGPSPMRFRNTPPPAHSRKRVGAPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+      +I L+GERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            + +SVVVVATSDE  ++R+ A    ++IAEYF  +  +VL ++DS+TRFA + REI  +
Sbjct: 210 GMARSVVVVATSDEPALMRRQAAYLTLSIAEYFRDEDKDVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G I+ + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTISGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ RS+AE GR+P ++ L SVSR   ++       ++     ++  + +  ++  +
Sbjct: 329 DGHIVMQRSIAERGRFPAINVLKSVSRTMPRSADPAYLPVIKRARQVMATYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G YRPG    +D+AV     + +FL+Q   + +S
Sbjct: 389 GAYRPGSSAEVDEAVRLHEPLEEFLRQGKDEATS 422


>gi|163850256|ref|YP_001638299.1| flagellum-specific ATP synthase [Methylobacterium extorquens PA1]
 gi|254559506|ref|YP_003066601.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
 gi|163661861|gb|ABY29228.1| flagellar protein export ATPase FliI [Methylobacterium extorquens
           PA1]
 gi|254266784|emb|CAX22583.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
          Length = 451

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/333 (47%), Positives = 214/333 (64%), Gaps = 2/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I PSA W GR ++ALG+PIDG   L +G     + +  PPA  R+RV      G+R I+ 
Sbjct: 105 IRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPPAHGRRRVGPPLDLGVRCINT 164

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I LVGERGREV+EF++D LG   
Sbjct: 165 FLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERGREVQEFLQDDLGAAG 224

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDE  ++R+ A    + +AEYF  +G  VL ++DSITRFA + R+I    
Sbjct: 225 LARSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVLCMIDSITRFAMAQRDIGLAG 284

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P A+GY  +VFSELPRLLER GP   E G I+ + +VLV+GD+HN+P+AD+VR ILD
Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVLVEGDDHNEPVADAVRGILD 343

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV+ R +AE+GRYP ++ L SVSR   +A        V     ++  + +  ++  +G
Sbjct: 344 GHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPARLPTVRRARKVLATYADMEELIRLG 403

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 404 AYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 436


>gi|167644988|ref|YP_001682651.1| flagellum-specific ATP synthase [Caulobacter sp. K31]
 gi|167347418|gb|ABZ70153.1| ATPase, FliI/YscN family [Caulobacter sp. K31]
          Length = 445

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 219/340 (64%), Gaps = 6/340 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR+INA G+PIDG   L +G++   + +  PPA  R RV +    G+R +++
Sbjct: 91  VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNV 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGREVREFIE+ LG + 
Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFIEETLGEEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK+++VVVATSDE  + R+ A    + I EY   +   VL ++DS+TRFA + REI   +
Sbjct: 211 LKRAIVVVATSDEPALTRRQAAYMTLAICEYLRDQDQEVLCLMDSVTRFAMAQREIGLAA 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VF+ELP+LLER GP          G ITA+ +VLVDGD+HN+PIAD+ 
Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRADGTTAGPITALFTVLVDGDDHNEPIADAT 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV+ R++AE GR+P ++ L S+SR      + +E+++V +    +  +    +
Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQTPEEREVVKAARQTMAAYSNMEE 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  IG YR G D I+D+A+   P I  FL Q   + +S D
Sbjct: 391 LIRIGAYRAGADPIIDRAIRLNPAIEAFLGQDKDEATSLD 430


>gi|209886224|ref|YP_002290081.1| flagellar protein export ATPase FliI [Oligotropha carboxidovorans
           OM5]
 gi|209874420|gb|ACI94216.1| flagellar protein export ATPase FliI [Oligotropha carboxidovorans
           OM5]
          Length = 441

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/328 (46%), Positives = 220/328 (67%), Gaps = 2/328 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ P A W GRV+NA+G+PIDG   L +G + +   +  PPA  R+RV +    G+R ++
Sbjct: 90  QVRPCAAWLGRVVNAMGEPIDGKGPLPQGSVPVSFRNLPPPAHARKRVGEPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDADISVIGLVGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + IAEYF  +  +VL ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAIAEYFRDQDQSVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ R++AE GRYP ++ L SVSR   K+   +   ++     ++  + +  ++  +
Sbjct: 329 DGHIVMERAIAERGRYPAINILKSVSRTMPKSADPEFLPVIMRGRQVMATYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G YR G    +D+A+     + DFL+Q+
Sbjct: 389 GAYRAGSSPEVDEAIRLHEPLEDFLRQA 416


>gi|188580014|ref|YP_001923459.1| flagellum-specific ATP synthase [Methylobacterium populi BJ001]
 gi|179343512|gb|ACB78924.1| flagellar protein export ATPase FliI [Methylobacterium populi
           BJ001]
          Length = 452

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 176/412 (42%), Positives = 240/412 (58%), Gaps = 10/412 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSDNLG---QVIRINLDIVYICPVGI 77
           G +++I  +   V      + LG   D VV  G  +       +VI    D     P G 
Sbjct: 27  GRVTAIRGLLVEVAGPVSAMRLGGRIDVVVEGGHGAATATVPCEVIGFAGDRALAMPFGS 86

Query: 78  GEEISLG--DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
            E +  G   LV       I PSA W GR ++ALG+PIDG   L +G     + +  PPA
Sbjct: 87  LEGVRRGCPALVRDEAAGAIRPSAAWLGRTVDALGRPIDGLGPLPQGPAIYPLRADPPPA 146

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R+RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I LV
Sbjct: 147 HGRRRVGPPLDLGVRCINTFLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLV 206

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EF++D LG   L +SVVVVATSDE  ++R+ A    + IAEYF  +G  VL 
Sbjct: 207 GERGREVQEFLQDDLGAAGLARSVVVVATSDEPVLMRRNAAYVTLAIAEYFRDQGAQVLC 266

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DSITRFA + R+I    GE P A+GY  +VFSELPRLLER GP   E G I+ + +VL
Sbjct: 267 MIDSITRFAMAQRDIGLAGGEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVL 325

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+HN+P+AD+VR ILDGHIV+ R +AE+GRYP ++ L SVSR   +A        V 
Sbjct: 326 VEGDDHNEPVADAVRGILDGHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTVR 385

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               ++  + +  ++  +G YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 386 RARKVLATYADMEELIRLGAYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 437


>gi|218528814|ref|YP_002419630.1| flagellum-specific ATP synthase [Methylobacterium chloromethanicum
           CM4]
 gi|218521117|gb|ACK81702.1| ATPase FliI/YscN [Methylobacterium chloromethanicum CM4]
          Length = 451

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 157/333 (47%), Positives = 214/333 (64%), Gaps = 2/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I PSA W GR ++ALG+PIDG   L +G     + +  PPA  R+RV      G+R I+ 
Sbjct: 105 IRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPPAHGRRRVGPPLDLGVRCINT 164

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I LVGERGREV+EF++D LG   
Sbjct: 165 FLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERGREVQEFLQDDLGAAG 224

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDE  ++R+ A    + +AEYF  +G  VL ++DSITRFA + R+I    
Sbjct: 225 LARSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVLCMIDSITRFAMAQRDIGLAG 284

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P A+GY  +VFSELPRLLER GP   E G I+ + +VLV+GD+HN+P+AD+VR ILD
Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVLVEGDDHNEPVADAVRGILD 343

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV+ R +AE+GRYP ++ L SVSR   +A        V     ++  + +  ++  +G
Sbjct: 344 GHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTVRRARKVLATYADMEELIRLG 403

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 404 AYRAGSAPEVDEAVALMPDLTAFLGQGKEEATS 436


>gi|329849943|ref|ZP_08264789.1| flagellar protein export ATPase FliI [Asticcacaulis biprosthecum
           C19]
 gi|328841854|gb|EGF91424.1| flagellar protein export ATPase FliI [Asticcacaulis biprosthecum
           C19]
          Length = 443

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 154/375 (41%), Positives = 231/375 (61%), Gaps = 7/375 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D   + P G  E ++ G ++       ++ P+  W GR++++ G  ID    L
Sbjct: 56  EVVGFREDRALMMPFGPVEGVTPGAEIRISAEGSKVFPTTAWLGRIVDSFGNAIDSHGPL 115

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G     + +  P A  R RV +    G+R +D+FT  C GQR+GVFAGSG+GKS LLS
Sbjct: 116 PQGPEGYLLKAAPPAAHTRARVGERLNLGVRAMDVFTTCCRGQRLGVFAGSGVGKSVLLS 175

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D V++ L+GERGREVREFIE+ LG + LK+++VVVATSDE  + R+ A    
Sbjct: 176 MLAREATCDAVVVGLIGERGREVREFIEETLGPEGLKRAIVVVATSDEPALKRRQAAYMT 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + +AE+   +G  VL ++DS+TRFA + REI   +GE P  +GY  + F+ELP+LLER G
Sbjct: 236 LALAEFLRDQGLEVLCLMDSVTRFAMAQREIGLATGEPPTTKGYTPTCFAELPKLLERAG 295

Query: 299 PSE-----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           P        + G ITA+ +VLVDGD+HN+PIAD+VR ILDGHIV++R++AE GR+P +D 
Sbjct: 296 PGPVLADGTQAGPITALFTVLVDGDDHNEPIADAVRGILDGHIVMSRNIAERGRFPAIDV 355

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR   +  +  E+++V     ++  +    ++  IG YR G D  +D+A+   P +
Sbjct: 356 LKSISRTMPECQTIPEREVVRQARKVLSAYSNMEELIRIGAYRTGADPDVDRAIQLNPAV 415

Query: 414 YDFLKQSPSDLSSED 428
            +FL+Q   + +  D
Sbjct: 416 EEFLRQGKDEYTPLD 430


>gi|27377312|ref|NP_768841.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
 gi|27350455|dbj|BAC47466.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
          Length = 441

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 156/346 (45%), Positives = 226/346 (65%), Gaps = 3/346 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRV+NALG+PIDG   L +G   M   +  PPA +R+RV      G+R ++
Sbjct: 90  QVRPSTAWLGRVVNALGEPIDGKGPLPQGSSPMPFRNTPPPAHSRKRVGSPLDLGVRAMN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+      +I L+GERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + +AEYF  +  +VL ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEDKDVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G ITA+ +VLVDGD+HN+PIAD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GAITAIFTVLVDGDDHNEPIADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIV+ RS+AE GRYP ++ L SVSR   K+   +    +     ++  + +  ++  +
Sbjct: 329 DGHIVMQRSIAERGRYPAINILKSVSRTMPKSADPEFWPTIQKARQVMATYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           G YR G    +D+A+     +  FL+Q   + +S  D ++++ + L
Sbjct: 389 GAYRAGSSPEVDEAIRLHEPLEGFLRQRKDENASLADGYRQLAQIL 434


>gi|240137327|ref|YP_002961796.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
 gi|240007293|gb|ACS38519.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
          Length = 451

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 157/333 (47%), Positives = 213/333 (63%), Gaps = 2/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I PSA W GR ++ALG+PIDG   L +G     + +  PPA  R+RV      G+R I+ 
Sbjct: 105 IRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPPAHGRRRVGPPLDLGVRCINT 164

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I LVGERGREV+EF++D LG   
Sbjct: 165 FLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERGREVQEFLQDDLGAAG 224

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  SVVVVATSDE  ++R+ A    + +AEYF  +G  VL ++DSITRFA + R+I    
Sbjct: 225 LAHSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVLCMIDSITRFAMAQRDIGLAG 284

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P A+GY  +VFSELPRLLER GP   E G I+ + +VLV+GD+HN+P+AD+VR ILD
Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVLVEGDDHNEPVADAVRGILD 343

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV+ R +AE+GRYP ++ L SVSR   +A        V     ++  + +  ++  +G
Sbjct: 344 GHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTVRRARKVLATYADMEELIRLG 403

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 404 AYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 436


>gi|170751942|ref|YP_001758202.1| flagellum-specific ATP synthase [Methylobacterium radiotolerans JCM
           2831]
 gi|170658464|gb|ACB27519.1| flagellar protein export ATPase FliI [Methylobacterium
           radiotolerans JCM 2831]
          Length = 450

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 173/408 (42%), Positives = 241/408 (59%), Gaps = 6/408 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEI 81
           G + +I  +   V      + LG  V  +G N   L   +VI    D     P G  E +
Sbjct: 29  GRVVAIRGLLVEVAGPVAAMRLGGRVDVEGANGHGLVPCEVIGFQGDRALAMPFGSLEGV 88

Query: 82  SLG--DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
             G    V       I PS  W GRVI+ALG+P+DG   L +G     + +  PPA  R 
Sbjct: 89  RRGCPAYVRDESAGAIRPSGAWLGRVIDALGRPVDGLGPLAQGPDVYPLRADPPPAHART 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I LVGERG
Sbjct: 149 RVGGPLDLGVRCINTFLTMCAGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERG 208

Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV+EF++D LG   L +SVVVVATSDE  ++R+ A    +++AE+F  +G  VL ++DS
Sbjct: 209 REVQEFLQDDLGAAGLARSVVVVATSDEPALMRRNAAYVTLSVAEHFRDQGAKVLCMIDS 268

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA + R+I   +GE P A+GY  +VFSELPRLLER GP   + G I+A+ +VLV+GD
Sbjct: 269 ITRFAMAQRDIGLAAGEPPTAKGYTPTVFSELPRLLERAGPGVGQ-GTISALFTVLVEGD 327

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR   ++       +V     
Sbjct: 328 DHNEPVADAVRGILDGHIVMERAIAERGRYPAINVLRSVSRTMPRSCDPAYLPVVRRARR 387

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L+  + +  ++  +G YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 388 LLSTYADMEELIRLGAYRAGSSQEVDEAVALMPHLEAFLGQGKEEATS 435


>gi|332295033|ref|YP_004436956.1| ATPase, FliI/YscN family [Thermodesulfobium narugense DSM 14796]
 gi|332178136|gb|AEE13825.1| ATPase, FliI/YscN family [Thermodesulfobium narugense DSM 14796]
          Length = 435

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 186/435 (42%), Positives = 258/435 (59%), Gaps = 21/435 (4%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           KNL+ L    EDY  N +   G I  I+   Y +  +   V +G+ V      S     V
Sbjct: 2   KNLKVLKDFIEDY--NYLPWNGTIDKISG--YVIESIGPKVSIGEIVYIDSGKSQIPCLV 57

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGR-----VINALGKPIDGDD 117
           I  + + VY+ P    E I  G +V   G+        W G+     V++ LG+P+  D+
Sbjct: 58  IGFSSNKVYLTPFDAIEGIEPGSIVKKTGK----QLGLWVGKHLLGQVLDGLGRPLS-DE 112

Query: 118 SLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            + + D+S    I +K P  + R R+ +   TGIR ID    L  GQR+G+FAGSGIGK+
Sbjct: 113 YIQRDDMSQYRSIENKSPHPLKRGRIREPISTGIRAIDGLLTLGKGQRVGIFAGSGIGKT 172

Query: 176 TLLSMFARSDCFDKV-IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           TLL M +R  C  +V II+LVGERGREVREF+E+ LG D L KSVV+V+TSD  P  R +
Sbjct: 173 TLLGMISRF-CNAQVNIIALVGERGREVREFLEESLGEDGLAKSVVIVSTSDNPPSQRVL 231

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           +  TA  IAEYF   G +VL+++DS+TR   + RE+  + GE P  RGYP SVF+ + RL
Sbjct: 232 SAFTATVIAEYFRDLGMDVLMVMDSLTRVCMAQRELGLSIGEPPTTRGYPPSVFTMMARL 291

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G S+K  G+IT + +VLV+GD+  +PIAD  RSILDGHIVL+R LAE G YPP+D 
Sbjct: 292 LERAGTSDK--GSITGIYTVLVEGDDLAEPIADHARSILDGHIVLSRDLAERGYYPPIDI 349

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSRL +     D   L   +  LI  ++E  D+  IG Y+ G +  +D+++ ++  I
Sbjct: 350 SQSVSRLMNSITDKDHLNLSYRIKELIASYKEAYDLINIGAYQKGSNSKIDESIEKISKI 409

Query: 414 YDFLKQSPSDLSSED 428
            +FLKQ+P D+SS D
Sbjct: 410 EEFLKQTPEDISSFD 424


>gi|78043388|ref|YP_359843.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995503|gb|ABB14402.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 434

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 170/404 (42%), Positives = 246/404 (60%), Gaps = 6/404 (1%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           TV      V +G+ V     N+  L +V+    +   + P+G    ISLG LV    R  
Sbjct: 32  TVEAHGLKVSVGETVEILAGNARVLAEVVGFKEENAILMPLGEINGISLGSLVRPLRRQL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I+      G+V++ LG+P++ D   G+      +  K P  ++R+R++K F TGI+ ID
Sbjct: 92  QITVGKSLLGKVLDGLGRPLNADKIYGR---HFSLDRKPPKPLHRRRIKKPFATGIKAID 148

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
                  GQR+G+FAGSG+GKSTLL M AR    D  +I+L+GERGREV +FIE+ LG+ 
Sbjct: 149 GPLTCGEGQRLGIFAGSGVGKSTLLGMIARYAEADVNVIALIGERGREVLDFIENDLGEG 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           +KKSV+VVATS++  + R      A  IAEYF  +G  VLL++DS+TRFA + REI   +
Sbjct: 209 IKKSVLVVATSEQPALFRVKGAFVATAIAEYFREQGKKVLLMMDSLTRFAMAQREIGLAA 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P +RGY  SVF+ LP+L+ER G    +KG+ITA  +VLV+GD+ N+PIAD+VR +LD
Sbjct: 269 GEPPSSRGYTPSVFALLPKLVERAG--NDDKGSITAFYTVLVEGDDFNEPIADAVRGLLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LA +G YP +D LAS SRL  +        L   +  ++  + +  D+ LIG
Sbjct: 327 GHIVLSRQLAGKGHYPAIDLLASNSRLMPELVDEQHLALTLKMREILDIYRQNEDLILIG 386

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            Y+PG + +LD+A+  VP I  FL+Q  ++       +E+ K L
Sbjct: 387 AYKPGTNPLLDRAIQLVPKINQFLQQKQNEKVDFTTTKEMLKTL 430


>gi|163738066|ref|ZP_02145482.1| ATP synthase FliI/YscN [Phaeobacter gallaeciensis BS107]
 gi|163742538|ref|ZP_02149924.1| H+-transporting two-sector ATPase, flagellum-specific [Phaeobacter
           gallaeciensis 2.10]
 gi|161384123|gb|EDQ08506.1| H+-transporting two-sector ATPase, flagellum-specific [Phaeobacter
           gallaeciensis 2.10]
 gi|161388682|gb|EDQ13035.1| ATP synthase FliI/YscN [Phaeobacter gallaeciensis BS107]
          Length = 442

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 167/419 (39%), Positives = 257/419 (61%), Gaps = 4/419 (0%)

Query: 5   LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           +  +  L +D + K L    G +S I+    TV+ L+    +GD ++ +   SD L G+V
Sbjct: 2   ISAINALTQDLANKKLSSAVGRVSEISGGAITVSGLNGQARIGDRLILRRAGSDPLEGEV 61

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +RI+   V + P    + +++GD V        +P+  W GRVI+  G P+DG   + +G
Sbjct: 62  MRISGSEVSMLPDTAPDRVAVGDAVLLHPTPDFAPADSWIGRVIDPFGAPLDGRPMM-RG 120

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           + + ++M+  P A +R+ + +   TG+ V +   P+  GQR+G+FAGSG+GKSTLL+  A
Sbjct: 121 EATRDLMAAPPKAASRRPMGERLATGLAVFNTILPIVKGQRVGLFAGSGVGKSTLLATLA 180

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D V+I+L+GERGREV  F++D LGD  ++++VVV ATSD+S ++R+    +A+ +
Sbjct: 181 QNMEADVVVIALIGERGREVNHFVKDVLGDEGMQRAVVVAATSDQSALVRRRCAWSAMAV 240

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +G NVL + DS+TRFA + REIA +SGE P  RGYP SV   +  L ER GP  
Sbjct: 241 AEHFRDQGKNVLFLADSVTRFAEAHREIAVSSGEAPALRGYPPSVTPLITGLCERAGPGS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+ITA+ SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD   SVSR  
Sbjct: 301 GDQGDITAIFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRSL 360

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             A +ADE   +  +   +  +E++  +   G Y  G D+ LD+AV   P +  F  +S
Sbjct: 361 PAAATADENSAILDVRKYLGAYEQSEVMIRAGLYSEGNDVTLDQAVKLWPELDSFFGRS 419


>gi|259417146|ref|ZP_05741065.1| flagellum-specific ATP synthase [Silicibacter sp. TrichCH4B]
 gi|259346052|gb|EEW57866.1| flagellum-specific ATP synthase [Silicibacter sp. TrichCH4B]
          Length = 447

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 167/425 (39%), Positives = 259/425 (60%), Gaps = 5/425 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M K+++ L+Q  E  +  L    G ++ I+     V+ L     +GD  V+ +GK  D  
Sbjct: 6   MMKSIQALSQ--ELANTRLAAPMGRVTGISGGEIEVSGLETQARIGDRLVLRRGKKDDLH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+ I  + + + P    E  S+GD V  +     +P   W GRVI+  G+P+DG   L
Sbjct: 64  GEVLAIGANHIRMLPDTAPERASIGDAVLLFETPEFAPDNSWIGRVIDPFGEPLDGKPML 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G  S ++M   P A  R+ + K   TG+ +++   P+  GQRIG+FAGSG+GKSTL++
Sbjct: 124 -RGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQRIGLFAGSGVGKSTLMA 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+++ LG + +K++VVV ATSD+S ++R+    +A
Sbjct: 183 QLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVVVAATSDQSALVRRRCAWSA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AE+F  +G NVL + DSITRFA + REIA  SGE P  RG+P SV   +  L ER G
Sbjct: 243 MSVAEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAPALRGFPPSVTPLITGLCERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P +D   SVS
Sbjct: 303 PGLEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A + +E +++ ++   +  +E++  +   G Y  G DL+LD+AV   P +  F  
Sbjct: 363 RSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAGLYSEGNDLVLDQAVKIWPELDSFFG 422

Query: 419 QSPSD 423
           +  +D
Sbjct: 423 RDETD 427


>gi|20807886|ref|NP_623057.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Thermoanaerobacter tengcongensis MB4]
 gi|254478883|ref|ZP_05092247.1| flagellar protein export ATPase FliI [Carboxydibrachium pacificum
           DSM 12653]
 gi|20516451|gb|AAM24661.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Thermoanaerobacter tengcongensis MB4]
 gi|214035196|gb|EEB75906.1| flagellar protein export ATPase FliI [Carboxydibrachium pacificum
           DSM 12653]
          Length = 437

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 169/363 (46%), Positives = 235/363 (64%), Gaps = 5/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+    + VY+ P+G  E I  G  V   G+  +++      GRV++ LG PIDG  
Sbjct: 57  LAEVVGFKEEKVYLMPLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKG 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L K + S+ + +  P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTL
Sbjct: 117 PL-KYEKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 175

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREV EFIE  LG+  LK+SVVVVATSD   ++R    +
Sbjct: 176 LGMMARNAKADLNVIALIGERGREVNEFIEKDLGEEGLKRSVVVVATSDTPALVRVKGAM 235

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +VLL++DSITRFA + REI  + GE PV+RGY  SVFS LP+LLER
Sbjct: 236 TATAIAEYFRDQGLDVLLMMDSITRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLER 295

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LAS
Sbjct: 296 SGSSQK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+ +   + + K+LV+   +++  + E  D+  IG Y  G +  +D+A+     +  F
Sbjct: 354 VSRVINDIITDEHKELVAKFKNILATYAEAEDLINIGAYNFGTNPKIDEAIELNEKMNSF 413

Query: 417 LKQ 419
           L+Q
Sbjct: 414 LRQ 416


>gi|302382319|ref|YP_003818142.1| ATPase, FliI/YscN family [Brevundimonas subvibrioides ATCC 15264]
 gi|302192947|gb|ADL00519.1| ATPase, FliI/YscN family [Brevundimonas subvibrioides ATCC 15264]
          Length = 446

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 212/337 (62%), Gaps = 6/337 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR+I+A G+PIDG   L +G     + +  P A +R RV +    G+R +D+
Sbjct: 91  VYPTTAWLGRIIDAFGQPIDGKGPLPQGPAPYPLRAAPPAAHSRGRVGERLDLGVRSMDV 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+G+FAGSG+GKS LLSM AR    D V++ L+GERGREVREFIE+ LG + 
Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLARQATCDAVVVGLIGERGREVREFIEETLGEEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L++++VVVATSDE  + R+ A    + I+EY   +   VL ++DS+TRFA + REI   +
Sbjct: 211 LRRAIVVVATSDEPALKRRQAAYMTMAISEYLRDQDLEVLCLMDSVTRFAMAQREIGLAA 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VFSELP+LLER GP            ITA+ +VLVDG +H++PIAD+V
Sbjct: 271 GEPPTTKGYTPTVFSELPKLLERAGPGPIRPDGTTAAPITAMFTVLVDGGDHDEPIADAV 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV++R +AE GR+P +D L SVSR      +  E++L       +  +    +
Sbjct: 331 RGILDGHIVMDRKIAERGRFPAIDVLKSVSRTLPGCQTPPERELNRRARQCLSAYSSMEE 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +  IG YR G D I D+A+   P +  FL Q   D++
Sbjct: 391 LIKIGAYRAGADPITDRAIALNPALEAFLGQDKDDVT 427


>gi|99082806|ref|YP_614960.1| ATP synthase FliI/YscN [Ruegeria sp. TM1040]
 gi|99039086|gb|ABF65698.1| flagellum-specific ATP synthase [Ruegeria sp. TM1040]
          Length = 442

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 167/425 (39%), Positives = 257/425 (60%), Gaps = 5/425 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M K+++ L+Q  E  +  L    G ++ I+     V+ L     +GD   + +GK  D  
Sbjct: 1   MMKSIQALSQ--ELANTRLAAPMGRVTGISGGEIEVSGLESQARIGDRLTLRRGKKDDLH 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+ I  D + + P    E  S+GD V  +     +P   W GRVI+  G+P+DG   L
Sbjct: 59  GEVLAIGSDHIRMLPDTAPERASIGDAVLLFQTPEFAPDDSWVGRVIDPFGEPLDGKPML 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G  S ++M   P A  R+ + K   TG+ +++   P+  GQRIG+FAGSG+GKSTL++
Sbjct: 119 -RGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQRIGLFAGSGVGKSTLMA 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+++ LG + +K++VVV ATSD+S ++R+     A
Sbjct: 178 QLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVVVAATSDQSALVRRRCAWAA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AE+F  +G NVL + DSITRFA + REIA  SGE P  RG+P SV   +  L ER G
Sbjct: 238 MSVAEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAPALRGFPPSVTPLITGLCERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P +D   SVS
Sbjct: 298 PGLEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A + +E +++ ++   +  +E++  +   G Y  G DL+LD+AV   P +  F  
Sbjct: 358 RSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAGLYSEGNDLVLDQAVKIWPELDSFFG 417

Query: 419 QSPSD 423
           ++  D
Sbjct: 418 RNELD 422


>gi|148257762|ref|YP_001242347.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1]
 gi|146409935|gb|ABQ38441.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1]
          Length = 440

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 150/327 (45%), Positives = 215/327 (65%), Gaps = 2/327 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRVINA+G+PIDG   L +G   +   +  PPA +R+RV      G+R ++
Sbjct: 89  QVRPSPAWLGRVINAMGEPIDGKGPLPQGAAPVPYRNNPPPAHSRKRVGSPLDLGVRALN 148

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+      +I L+GERGREV+EF++D LG +
Sbjct: 149 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 208

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + I+EYF  +G +VL ++DS+TRFA + REI  +
Sbjct: 209 GLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGKDVLCLMDSVTRFAMAQREIGLS 268

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 269 AGEPPTAKGYTPTVFTELPKLLERAGPGSGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGH+V+ RS+AE GRYP ++ L SVSR   K+        +     ++  + +  ++  +
Sbjct: 328 DGHVVMQRSIAERGRYPAINILKSVSRTMPKSADPVFLPTIMRARQVMATYADMEELIRL 387

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           G YR G    +D+A+     +  FL+Q
Sbjct: 388 GAYRAGSSPEVDEAIRLHEPLEAFLRQ 414


>gi|16127270|ref|NP_421834.1| flagellum-specific ATP synthase [Caulobacter crescentus CB15]
 gi|221236071|ref|YP_002518508.1| flagellum-specific ATP synthase [Caulobacter crescentus NA1000]
 gi|239977229|sp|B8H363|FLII_CAUCN RecName: Full=Flagellum-specific ATP synthase
 gi|239977230|sp|P0CAT8|FLII_CAUCR RecName: Full=Flagellum-specific ATP synthase
 gi|13424682|gb|AAK25002.1| flagellum-specific ATP synthase FliI [Caulobacter crescentus CB15]
 gi|220965244|gb|ACL96600.1| flagellum-specific ATP synthase fliL [Caulobacter crescentus
           NA1000]
          Length = 444

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 7/351 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR+INA G+PIDG   L +G++   + +  PPA  R RV +    G+R +++
Sbjct: 91  VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNV 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGREVREF+E+ LG + 
Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFVEETLGEEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+++VVVVATSDE  + R+ A    + I+E+   +   VL ++DS+TRFA + REI   +
Sbjct: 211 LRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQEVLCLMDSVTRFAMAQREIGLAA 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VF+ELP+LLER GP            ITA+ +VLVDGD+HN+PIAD+ 
Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVLVDGDDHNEPIADAT 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV+ R++AE GR+P ++ L S+SR         E+ +V     ++  +    +
Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVKGARQVMSAYSNMEE 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           +  IG YR G D ++D+A+   P I  FL Q   + +S +D F  + + LQ
Sbjct: 391 LIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGMLGQILQ 441


>gi|157738148|ref|YP_001490832.1| flagellum-specific ATP synthase [Arcobacter butzleri RM4018]
 gi|315636291|ref|ZP_07891541.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri JV22]
 gi|157700002|gb|ABV68162.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri RM4018]
 gi|315479380|gb|EFU70063.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri JV22]
          Length = 435

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 176/428 (41%), Positives = 255/428 (59%), Gaps = 10/428 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYIC 73
           S +L +  G I++I+++  T+T +   V +GD V  + +      LG V  IN     I 
Sbjct: 13  SASLPIAFGRITNISAI--TLTAIGLEVAVGDIVRIESEQRLYSVLGMVTTINDSSFIIV 70

Query: 74  PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P    E   + D VF       +       GRV+NALG+PID    +   D +  I    
Sbjct: 71  PFSFIEGFKINDKVFLQRDGLTVKCGNGLLGRVVNALGEPIDNKGKIRDLDENSAINKIS 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-I 191
              + R  +++ F TG++ ID       GQ++G+FAGSG+GKSTL+ M  +  C  +V +
Sbjct: 131 MSPLERGIIDQKFSTGVKAIDSMLTCGKGQKVGIFAGSGVGKSTLMGMIVKG-CEAQVKV 189

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           ++LVGERGRE+ EFI   L D+L+ +V+V ATSDES ++RK    TA++IAEYF  KG +
Sbjct: 190 VALVGERGREIPEFIHYNLNDDLENTVIVAATSDESALMRKYGAFTAMSIAEYFRDKGLD 249

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA + REI  ++GE PV+RGYP SVF+ LP+L+ER G    +KG+ITA  
Sbjct: 250 VLLMMDSVTRFAMAQREIGLSTGEPPVSRGYPPSVFALLPQLMERAG--NNQKGSITAFF 307

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ NDPIAD  RSILDGHIVL R L E+G YPP++ L S SR+ DK  + +   
Sbjct: 308 TVLVDGDDMNDPIADQSRSILDGHIVLTRELTEQGFYPPINLLKSASRVMDKVVTKEHYN 367

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVF 430
               L  ++   +E   +  +G Y+ G+D  LD A+ +   I +FL QS  + +S +++ 
Sbjct: 368 DFLKLKRVLSLIKENEVLVRVGAYKKGMDPELDNAMARKERIREFLTQSTQENVSFDEII 427

Query: 431 QEITKKLQ 438
               K LQ
Sbjct: 428 TNFRKVLQ 435


>gi|329888160|ref|ZP_08266758.1| flagellum-specific ATP synthase [Brevundimonas diminuta ATCC 11568]
 gi|328846716|gb|EGF96278.1| flagellum-specific ATP synthase [Brevundimonas diminuta ATCC 11568]
          Length = 357

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 155/337 (45%), Positives = 217/337 (64%), Gaps = 6/337 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR+I++ G+PIDG   L  G +   + +  PPA +R RV +    G+R +D+
Sbjct: 1   MRPTTAWLGRIIDSFGEPIDGLGPLTPGLVPYPLRAPPPPAHSRGRVGERLDLGVRAMDV 60

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT    GQR+G+FAGSG+GKS LLSM AR    D V++ L+GERGREVREFIE+ LG + 
Sbjct: 61  FTTTSRGQRLGIFAGSGVGKSVLLSMLARQATCDVVVVGLIGERGREVREFIEETLGEEG 120

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK++VVVVATSDE  + R+ A    + +AE+F  +G  VL ++DS+TRFA + REI   +
Sbjct: 121 LKRAVVVVATSDEPALKRRQAAYMTMAVAEFFRDQGLEVLCLMDSVTRFAMAQREIGLAA 180

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VF+ELP+LLER GP        E G ITA+ +VLVDG +H++PIAD+V
Sbjct: 181 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTEAGPITALFTVLVDGGDHDEPIADAV 240

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV++R +AE GR+P +D L SVSR      S  E++L       +  +    +
Sbjct: 241 RGILDGHIVMDRKIAERGRFPAIDVLKSVSRTMPGNQSPPERELNRRARQCLSAYSNMEE 300

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +  IG YR G D I+D+A+   P +  FL Q   D++
Sbjct: 301 LIRIGAYRTGADPIVDRAIALNPALEGFLTQDKDDVT 337


>gi|146338576|ref|YP_001203624.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278]
 gi|146191382|emb|CAL75387.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278]
          Length = 441

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/327 (45%), Positives = 214/327 (65%), Gaps = 2/327 (0%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++ PS  W GRV+NA+G+PIDG   L  G   +   +  PPA +R+RV      G+R ++
Sbjct: 90  QVRPSPAWLGRVVNAMGEPIDGKGPLPSGAAPVPYRNNPPPAHSRKRVGAPLDLGVRALN 149

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
            F   C GQR+G+FAGSG+GKS LLSM AR+      +I L+GERGREV+EF++D LG +
Sbjct: 150 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSDE  ++R+ A    + I+EYF  +G +VL ++DS+TRFA + REI  +
Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGKDVLCLMDSVTRFAMAQREIGLS 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A+GY  +VF+ELP+LLER GP   E G IT + +VLVDGD+HN+P+AD+VR IL
Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGSGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGH+V+ RS+AE GRYP ++ L SVSR   K+        +     ++  + +  ++  +
Sbjct: 329 DGHVVMQRSIAERGRYPAINILKSVSRTMPKSADPVFLPTIMRARQVMATYADMEELIRL 388

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           G YR G    +D+A+     +  FL+Q
Sbjct: 389 GAYRAGSSPEVDEAIRLHEPLETFLRQ 415


>gi|332297612|ref|YP_004439534.1| ATPase, FliI/YscN family [Treponema brennaborense DSM 12168]
 gi|332180715|gb|AEE16403.1| ATPase, FliI/YscN family [Treponema brennaborense DSM 12168]
          Length = 452

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 168/371 (45%), Positives = 230/371 (61%), Gaps = 8/371 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ +N   V +   G  + I +G  V   G   R++      GRVI+A+GKP DG   L
Sbjct: 59  EVVGLNGTTVQLMAYGETKGIEIGCEVVATGHVLRVAVGNGLLGRVIDAVGKPYDGKGEL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G L    ++  P  + R+ V +   TG+R ID    +  GQR+G+FAGSG+GKSTLLS
Sbjct: 119 ASG-LYYPALASPPAPLERRPVSQRMVTGVRAIDAMLAVAKGQRLGIFAGSGVGKSTLLS 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+LVGERGREV +FI+  LG+  LK+SVVVVATSD+  I R  A  TA
Sbjct: 178 MIARNTKADVNVIALVGERGREVVDFIDRDLGEEGLKRSVVVVATSDQPSIARLRAAYTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G +V+L+ DS+TRFAH+ REI   SGE P  RGYP SVF  LP+LLER G
Sbjct: 238 TAVAEYFRDQGKDVMLMFDSVTRFAHAQREIGLASGEPPAQRGYPPSVFDLLPKLLERSG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               + G+ITA  +VLVDGD+ ++PIAD VR  LDGHIVLNR LA+   +P +D LAS+S
Sbjct: 298 --TNQTGSITAFYTVLVDGDDMDEPIADKVRGTLDGHIVLNRKLAQAAHFPAIDVLASIS 355

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL+ +      ++ V+++  L+  + E  D+  +G Y+ G +  +DKA+   P I  FL 
Sbjct: 356 RLSKRVSGPATQQAVTTVRRLMASYAENEDMITVGAYQKGSNAAIDKAIDVHPDIEAFLM 415

Query: 419 Q---SPSDLSS 426
           Q    P+ L S
Sbjct: 416 QDEYEPAPLES 426


>gi|291278940|ref|YP_003495775.1| flagellar-specific ATP synthase FliI [Deferribacter desulfuricans
           SSM1]
 gi|290753642|dbj|BAI80019.1| flagellar-specific ATP synthase FliI [Deferribacter desulfuricans
           SSM1]
          Length = 436

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 180/439 (41%), Positives = 262/439 (59%), Gaps = 15/439 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQ 61
           K L+ L  +  D   N VV  G ++ I  V  T+      + +G     +G    N L +
Sbjct: 2   KKLKLLKNINFD---NSVVVTGKVTKI--VGLTIEADGPLLSIGTRCEIEGVGGKNILAE 56

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFH--WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           ++    D V + P    E I+ G +V +  +G   +  S    GRV++ LG+PID +  +
Sbjct: 57  IVGFKDDRVILMPYAESEGIAPGSIVRNVAYGNV-VKVSEELLGRVLDGLGRPIDSNRVI 115

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +L   + ++ P  + R+ ++    TG++ ID    +  GQR+G+FAGSG+GKS LL 
Sbjct: 116 TNYELK-SVYTEPPSPLEREIIKDAIHTGVKAIDALITIGKGQRVGIFAGSGVGKSVLLG 174

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GERGREVREFIE  LG+  LKKSVVVVATSD+SP++RKM    A
Sbjct: 175 MIARNSSADVNVIALIGERGREVREFIERDLGEEGLKKSVVVVATSDQSPLVRKMGAFVA 234

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIAEYF S G +V+ ++DS+TRFA + REI    GE P  +GY  SVF+ LP+LLER G
Sbjct: 235 TTIAEYFRSLGKDVMFMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFALLPKLLERAG 294

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++K +G IT + +VLV+GD+ NDPIADSVRSI+DGHIVL+R+LA +  +P +D + S S
Sbjct: 295 -TKKGEGTITGLYTVLVEGDDLNDPIADSVRSIIDGHIVLDRNLAAKNHFPAIDVMMSAS 353

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL  +       +    L  LI  + E  D+  IG Y  G +  +D+A+ ++ +I +FLK
Sbjct: 354 RLMKEIVDERHFEAAGRLRDLIATYREAEDLINIGAYVKGSNKKIDEAILKIDLINNFLK 413

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   + S    F+E  K+L
Sbjct: 414 QKIDETSP---FEETKKQL 429


>gi|254418613|ref|ZP_05032337.1| ATPase FliI/YscN family [Brevundimonas sp. BAL3]
 gi|196184790|gb|EDX79766.1| ATPase FliI/YscN family [Brevundimonas sp. BAL3]
          Length = 447

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/337 (44%), Positives = 214/337 (63%), Gaps = 6/337 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR+I+A G PIDG   L +G +   + +  PPA +R RV +    G+R +D+
Sbjct: 91  VRPTTAWLGRIIDAFGNPIDGKGPLPQGPVPYPLRAPPPPAHSRGRVGERLDLGVRAMDV 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGREVREF+E+ LG + 
Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKQATCDAVVVGLIGERGREVREFVEETLGEEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+++VVVVATSDE  + R+ +    + IAEY   +   VL ++DS+TRFA + REI   +
Sbjct: 211 LRRAVVVVATSDEPALKRRQSAYMTMAIAEYLRDQDLEVLCLMDSVTRFAMAQREIGLAA 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VF+ELP+LLER GP            ITA+ +VLVDG +H++PIAD+V
Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPVRPDGTTAAPITALFTVLVDGGDHDEPIADAV 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV++R +AE GR+P +D L SVSR      +  E++L       +  +    +
Sbjct: 331 RGILDGHIVMDRKIAERGRFPAIDVLKSVSRTMPACQTPPERELNKRARQCLSAYANMEE 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +  IG YR G D I+D+A+   P + DFL Q   D +
Sbjct: 391 LIKIGAYRTGADPIVDRAIALNPALEDFLSQDKDDAT 427


>gi|256750743|ref|ZP_05491628.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914411|ref|ZP_07131727.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X561]
 gi|307724353|ref|YP_003904104.1| ATPase, FliI/YscN family [Thermoanaerobacter sp. X513]
 gi|320116081|ref|YP_004186240.1| FliI/YscN family ATPase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|256750326|gb|EEU63345.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889346|gb|EFK84492.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X561]
 gi|307581414|gb|ADN54813.1| ATPase, FliI/YscN family [Thermoanaerobacter sp. X513]
 gi|319929172|gb|ADV79857.1| ATPase, FliI/YscN family [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 432

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 167/363 (46%), Positives = 235/363 (64%), Gaps = 5/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+    + VY+ P+G  E I  G  V   G+  R++      GRV++ LG PIDG  
Sbjct: 52  LAEVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRVNVGNELLGRVLDGLGNPIDGKG 111

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K + S+ I +  P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTL
Sbjct: 112 PI-KFEKSIPINNVPPDPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 170

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREV EF+E  LG+  LKKSVVVVATSD   ++R    +
Sbjct: 171 LGMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAM 230

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +VLL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER
Sbjct: 231 TATAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLER 290

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LAS
Sbjct: 291 SGCSKK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 348

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+ +   + + K+L++    ++  + E  D+  IG Y  G +  +D+A+     + +F
Sbjct: 349 VSRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNF 408

Query: 417 LKQ 419
           L+Q
Sbjct: 409 LRQ 411


>gi|167037666|ref|YP_001665244.1| flagellar protein export ATPase FliI [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040327|ref|YP_001663312.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X514]
 gi|166854567|gb|ABY92976.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X514]
 gi|166856500|gb|ABY94908.1| flagellar protein export ATPase FliI [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
          Length = 437

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 167/363 (46%), Positives = 235/363 (64%), Gaps = 5/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+    + VY+ P+G  E I  G  V   G+  R++      GRV++ LG PIDG  
Sbjct: 57  LAEVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRVNVGNELLGRVLDGLGNPIDGKG 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K + S+ I +  P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTL
Sbjct: 117 PI-KFEKSIPINNVPPDPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 175

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREV EF+E  LG+  LKKSVVVVATSD   ++R    +
Sbjct: 176 LGMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAM 235

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +VLL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER
Sbjct: 236 TATAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLER 295

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LAS
Sbjct: 296 SGCSKK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+ +   + + K+L++    ++  + E  D+  IG Y  G +  +D+A+     + +F
Sbjct: 354 VSRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNF 413

Query: 417 LKQ 419
           L+Q
Sbjct: 414 LRQ 416


>gi|114569221|ref|YP_755901.1| flagellum-specific ATP synthase [Maricaulis maris MCS10]
 gi|114339683|gb|ABI64963.1| flagellar protein export ATPase FliI [Maricaulis maris MCS10]
          Length = 448

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 160/409 (39%), Positives = 238/409 (58%), Gaps = 7/409 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++++  +          + LG     +  N     +V+    +   + P G  E I  
Sbjct: 19  GRVTALNGLLVEAEGPKAGLSLGAHAKIETGNGIAECEVVGFRGETALMMPFGPLEGIRP 78

Query: 84  G-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G   +      R+ PS  W GRV++  G+P+D    L +G     +    P A  R R+ 
Sbjct: 79  GARALLQPEAARVRPSRAWLGRVLDGFGRPLDDGVPLTEGGTPYPLKGNPPSAHARARLG 138

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+RV++ F P+  GQR+G+FAGSG+GKS L+SM AR+   D ++I L+GERGRE 
Sbjct: 139 ERMDMGVRVLNSFVPMRRGQRLGIFAGSGVGKSVLMSMLARACDADVIVIGLIGERGREA 198

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF++D LG +  K+SVV+  TSD   + R+ A    +T AEYF  +G +VL ++DS+TR
Sbjct: 199 REFVDDVLGPEGRKRSVVITETSDAPALARRQAAHLTLTAAEYFRDQGLDVLCLMDSVTR 258

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-----GNITAVISVLVD 316
           FA + REI   +GE P  RGY  SVF+ELPRLLER GP  + K     G+IT + +VLVD
Sbjct: 259 FALAQREIGLAAGEPPTTRGYTPSVFAELPRLLERAGPGPQRKDGKKSGSITGLFTVLVD 318

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+HN+PIAD+VR ILDGH+V++R++AE GRYP +D L SVSR A + + A E+ LV+  
Sbjct: 319 GDDHNEPIADAVRGILDGHVVMSRAIAERGRYPAIDVLKSVSRTAPEVYDAAERPLVAEA 378

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              +  + +  ++  +G Y  G +  +D+A+     +  FL QS  D +
Sbjct: 379 RKHLSAYADMEELIRLGAYTQGSNPAVDRAIELNEPLEAFLGQSKDDAA 427


>gi|260893872|ref|YP_003239969.1| flagellar protein export ATPase FliI [Ammonifex degensii KC4]
 gi|260866013|gb|ACX53119.1| flagellar protein export ATPase FliI [Ammonifex degensii KC4]
          Length = 436

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 184/431 (42%), Positives = 247/431 (57%), Gaps = 26/431 (6%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYV---CL-----GDFVVHQGKNSDNLGQVIRINLDI 69
            L  Q G +S +  +   V  +  +V   CL     G +VV +               D+
Sbjct: 15  TLCQQVGVVSKVVGLTLEVKGIKPFVGEVCLVELSPGKYVVAEAAG---------FREDV 65

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P G    I  G  V+   R F +       GRV+N LG+PIDG   L  G + + +
Sbjct: 66  VLLMPFGELTGIRPGCRVYPRRRPFTVRVGEHLLGRVLNGLGEPIDGK-PLPSG-IPLPV 123

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  + R+R+E+ F TG+R ID F     GQRIG+FAGSG+GKSTLL M AR    D
Sbjct: 124 NNRPPSPLARRRIEEVFVTGVRAIDAFITCGRGQRIGIFAGSGVGKSTLLGMIARFGNAD 183

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+LVGERGREV EFIE  LG+  L KSVVVVATSDE  +LR  A   A TIAEYF  
Sbjct: 184 VNVIALVGERGREVLEFIEKDLGEEGLAKSVVVVATSDEPALLRLRAAFVATTIAEYFRD 243

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G +VLL++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G     KG+I
Sbjct: 244 TGRHVLLLMDSLTRFALAQREVGLAVGEPPTTRGYTPSVFALLPRLLERAG--NAAKGSI 301

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T   +VLV+GD+ N+PI D+ RSILDGHIVL+R LA+   YP +D LASVSRL     + 
Sbjct: 302 TGFYTVLVEGDDLNEPITDAARSILDGHIVLSRQLAQANHYPAIDVLASVSRLMSAVVTP 361

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + ++    L  L+  + +  D+  IG Y  G +  +D+A+   P +  FL+Q P + +S 
Sbjct: 362 EHREAADLLRSLLAAYRQNEDLINIGAYVSGSNPTVDRAIALYPELVAFLRQKPEEYTS- 420

Query: 428 DVFQEITKKLQ 438
             F E   +L+
Sbjct: 421 --FPECVARLK 429


>gi|83859268|ref|ZP_00952789.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633]
 gi|83852715|gb|EAP90568.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633]
          Length = 436

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 151/333 (45%), Positives = 213/333 (63%), Gaps = 1/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I P   W GRV+++  +P D    L +GD+   +  + P A +RQR+ +    G+R +++
Sbjct: 89  IRPHKAWLGRVMDSFCRPQDSLGFLPEGDVEYALKGRPPGAHSRQRLGERLDLGVRAMNV 148

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FTP+  GQR+GVFAGSG+GKS LLSM AR    D ++I L+GERGRE REF+ED LG + 
Sbjct: 149 FTPMRLGQRLGVFAGSGVGKSVLLSMLARGSEADVIVIGLIGERGREAREFVEDVLGPEG 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+  TSD   + R+ A  T +  AEYF  +G NVL ++DSITRFA + REI   +
Sbjct: 209 RARSVVITETSDAPALARRRACYTTMATAEYFRDQGLNVLCLMDSITRFALAQREIGLAA 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  RGY  SVF+ELP LLER GP  +  G IT + +VLVDGD+HN+PIAD+VR ILD
Sbjct: 269 GEPPTTRGYTPSVFAELPGLLERAGPGPQGTGTITGLFTVLVDGDDHNEPIADAVRGILD 328

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV++RS+AE GR+P +D L S+SR A + ++ +E  L      L+  + +  ++  +G
Sbjct: 329 GHIVMSRSIAERGRFPAIDVLKSISRSAPEVYAPEEAPLAREARKLLAAYADMEELIRLG 388

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            Y  G +  +D+A+     +  FL Q   + SS
Sbjct: 389 AYSSGSNPEVDRAIAVNEPLEAFLGQGKDETSS 421


>gi|307264870|ref|ZP_07546432.1| flagellar protein export ATPase FliI [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|326389480|ref|ZP_08211047.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus JW 200]
 gi|306920128|gb|EFN50340.1| flagellar protein export ATPase FliI [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|325994485|gb|EGD52910.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus JW 200]
          Length = 436

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 168/363 (46%), Positives = 234/363 (64%), Gaps = 5/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+    + VY+ P+G  E I  G  V   G+  RI+      GRV++ LG PIDG  
Sbjct: 56  LAEVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRINVGNELLGRVLDGLGNPIDGKG 115

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K + S+ I +  P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTL
Sbjct: 116 PI-KFEKSIPINNVPPDPLERKRIREVIPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 174

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREV EF+E  LG+  LKKSVVVVATSD   ++R    +
Sbjct: 175 LGMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAM 234

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +VLL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER
Sbjct: 235 TATAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLER 294

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S  +KG+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LAS
Sbjct: 295 SGCS--KKGSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+ +   + + K+L++    ++  + E  D+  IG Y  G +  +D+A+     +  F
Sbjct: 353 VSRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNEKMNSF 412

Query: 417 LKQ 419
           L+Q
Sbjct: 413 LRQ 415


>gi|150021149|ref|YP_001306503.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis
           BI429]
 gi|149793670|gb|ABR31118.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis
           BI429]
          Length = 434

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 165/348 (47%), Positives = 229/348 (65%), Gaps = 9/348 (2%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I  S    GRV++ALG+P+DG   L K  +   I+ + P  + R+R+      GIR ID 
Sbjct: 91  IPVSEELLGRVVDALGRPLDGKKILSKEKIP--IVREAPNPLIRKRITTPISVGIRAIDG 148

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDN 213
           F  L +GQRIG+FAGSG+GKSTLL M AR+   D  +ISL+GERGREVREFIE D   + 
Sbjct: 149 FLTLGYGQRIGIFAGSGVGKSTLLGMIARNTSADINVISLIGERGREVREFIEKDLKKEG 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK+S+VVV+TSD+  +LR  A LTA +IAEYF  KG NVLL++DS+TR+A + RE+   +
Sbjct: 209 LKRSIVVVSTSDQPALLRVKALLTATSIAEYFRDKGYNVLLMVDSLTRWAMAQREVGLAT 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  RGYP SVF+ LP++LER G S  +KG+IT + +VLV+ D+ N+PI+D+VR I+D
Sbjct: 269 GEPPTTRGYPPSVFAGLPKILERAGNS--DKGSITGIYTVLVEADDFNEPISDTVRGIVD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHI+L+R LAE   YP +D L SVSRL +   + + K     L  LI  + + +D+  +G
Sbjct: 327 GHIILSRKLAESAHYPAIDVLMSVSRLMNDIVTKEHKISAMKLKDLIATYYDAKDLIDVG 386

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQ---EITKKL 437
            Y+ G +  +DK++  +  I  FLKQS  + +S +D  Q    I KK+
Sbjct: 387 AYKKGTNPKIDKSIELIDEINKFLKQSIDESMSFDDTVQYLISIAKKI 434


>gi|260429606|ref|ZP_05783583.1| flagellum-specific ATP synthase [Citreicella sp. SE45]
 gi|260420229|gb|EEX13482.1| flagellum-specific ATP synthase [Citreicella sp. SE45]
          Length = 454

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 163/398 (40%), Positives = 235/398 (59%), Gaps = 4/398 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G + S+      V  L+   C+GD +    +  D L G+V+RI  D+V + P    E +S
Sbjct: 23  GRVRSVDGTVIWVRGLAHVACIGDRL-RLFRGGDTLDGEVLRIRDDLVAMLPDEGAEGVS 81

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
            GD V   G   ++PS  W GRVI+  G+P+D D  L  G       +  PPA  R+ + 
Sbjct: 82  QGDRVAVLGAPTLAPSDSWIGRVIDPYGQPLD-DMPLNPGPQRRPFRASPPPAARRRGLG 140

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
               TG+   D   P+  GQR+G+FAGSG+GKS LL+  A+    D V+++LVGERGREV
Sbjct: 141 ARLPTGLSAFDTLLPIVRGQRVGLFAGSGVGKSRLLASLAQGMAADVVVLALVGERGREV 200

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            +F+   LG D + +SVVV ATSD SP+ R+  PL A+TIAE+F   G +VL + DSITR
Sbjct: 201 HDFVHTVLGEDGMARSVVVAATSDRSPLERRRCPLAAMTIAEHFRDNGRHVLFLADSITR 260

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+A  +GE P  RG+P S   ++ RL ER GP    +G+IT V SVLV G +  
Sbjct: 261 FAEAHREVAVAAGETPALRGFPPSTAHQIMRLAERAGPGLPGQGDITGVFSVLVAGSDME 320

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD +R +LDGH+VL+R ++E GR+P +D L SVSR   +A + +E  ++    HL+ 
Sbjct: 321 EPIADILRGVLDGHVVLSREISERGRFPAIDVLRSVSRSLPEAATEEENAVLLQARHLLG 380

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +  +  +   G YR G D +LD+A+   P +  F+ +
Sbjct: 381 AYARSETMIRAGLYREGEDPVLDQAIRAWPELDAFVGE 418


>gi|284989553|ref|YP_003408107.1| flagellar protein export ATPase FliI [Geodermatophilus obscurus DSM
           43160]
 gi|284062798|gb|ADB73736.1| flagellar protein export ATPase FliI [Geodermatophilus obscurus DSM
           43160]
          Length = 435

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 159/402 (39%), Positives = 244/402 (60%), Gaps = 5/402 (1%)

Query: 27  SSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           S + ++  T++       +GD V ++   +   L +V+ ++ + +   P+G    +  G 
Sbjct: 20  SVVGAMGLTLSVEGAVAAVGDLVEINPSPSGGLLAEVVAVSRERLTCMPLGELSGVHAGA 79

Query: 86  LVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
            V   G   ++       GRV++ LG+P+DG   L +    +++ S+ P A+ R RVE+ 
Sbjct: 80  RVRATGMPLQVPVGEALLGRVLDGLGRPVDGGPPLDQSLEFVDLASETPHALARTRVEEP 139

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
             +G+RV+D   PL  GQR+G+FAGSG+GKSTLL+   R    D  +I L+GERGREVRE
Sbjct: 140 LASGVRVLDTMVPLGKGQRLGIFAGSGVGKSTLLAQITRGTDADVRVIGLIGERGREVRE 199

Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           F+E+ LG + + ++VVVVATSDE P++R  A   A  IAE F  +G +VLL++DSITR A
Sbjct: 200 FLEENLGAEGMARTVVVVATSDEPPLVRLKAAFVATRIAEGFRDQGRDVLLMMDSITRTA 259

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            + RE+  ++GE P  RGYP SVF+ +P+LLE+ G +    G+IT + +VLVDGD+HN+P
Sbjct: 260 MAQREVGLSAGEPPATRGYPPSVFAMMPKLLEKAGTA--AVGSITGLYTVLVDGDDHNEP 317

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           IAD+ RSILDGH+VL R LA  G +P +D L S+SR+A       +      +  L+   
Sbjct: 318 IADTARSILDGHVVLTRKLATAGHFPAIDVLESISRVATAVVPPAQMADAREVRRLMGAL 377

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
            + +++  IG Y+ G D ++D+A    P I  FL+Q   +L+
Sbjct: 378 RDVKELIEIGAYQAGTDPLVDRARQLAPAIESFLQQPTGELT 419


>gi|225159028|ref|ZP_03725338.1| Sodium-transporting two-sector ATPase [Opitutaceae bacterium TAV2]
 gi|224802407|gb|EEG20669.1| Sodium-transporting two-sector ATPase [Opitutaceae bacterium TAV2]
          Length = 461

 Score =  295 bits (756), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 179/417 (42%), Positives = 246/417 (58%), Gaps = 10/417 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVGIGEEI 81
           G ++++T +   +      V LGD  V + +    + + +V+    + V + P+G    +
Sbjct: 38  GRVAAVTGLI--IESEGPNVGLGDICVIRSERDAFEVMAEVVGFRGERVLLMPLGETTGL 95

Query: 82  SLGDLVFHWGRFRISPS-ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V    R  I  S A   GRV++ALG+P DG   +    +   + S+ P  + RQR
Sbjct: 96  HAGCSVSAGDRPPIPVSGAQLLGRVLDALGRPFDGAGPVPTRRVDA-VHSRPPHPLRRQR 154

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + +   TG+R +D FTPL  GQR+G+FAGSG+GKSTLL M AR    D V+I LVGERGR
Sbjct: 155 IREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTLLGMIARGSAADVVVIGLVGERGR 214

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+E  LG + L +SVVVVATSD    LR  A  TA  IAE +  +G NVLL++DS+
Sbjct: 215 EVREFLEKDLGAEGLARSVVVVATSDSPAPLRLRAAFTATAIAESYRDQGKNVLLLMDSV 274

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI    GE P  RGY  SVF+ LPRLLER G    E G ITA+ +VLV+GD+
Sbjct: 275 TRFAMAQREIGLAIGEPPATRGYTPSVFALLPRLLERAGAG--ETGAITALYTVLVEGDD 332

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PIAD+VR ILDGH+VL+R+LA    YP +D L SVSRL     SA E +  +    L
Sbjct: 333 MNEPIADAVRGILDGHLVLSRALAHANHYPAIDVLESVSRLTRDICSATEVESAARAREL 392

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435
           +  ++   D+  IG Y+ G    LD+AV     +  FL+Q   ++ +  DVF  + +
Sbjct: 393 LAIYKRNEDLITIGAYQKGASAALDRAVTLHEPLKQFLRQRVDEIVARADVFNRLAE 449


>gi|169827123|ref|YP_001697281.1| flagellum-specific ATP synthase [Lysinibacillus sphaericus C3-41]
 gi|168991611|gb|ACA39151.1| Flagellum-specific ATP synthase [Lysinibacillus sphaericus C3-41]
          Length = 441

 Score =  295 bits (756), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 236/365 (64%), Gaps = 9/365 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115
           L +V+    +IV + P     EIS+G LV   G     ++ P     G+V++++G PIDG
Sbjct: 58  LAEVVGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPE--LIGKVLDSMGNPIDG 115

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L KG +++      P  + R  + +  + G++ ID    + +GQR+G+FAGSG+GKS
Sbjct: 116 T-LLPKGLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKS 174

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL M AR+   D  +I+L+GERGREVREFIE  LG + L +S+VV ATSD+  ++R   
Sbjct: 175 TLLGMIARNTQADLNVIALIGERGREVREFIERDLGPEGLSRSIVVAATSDQPALMRIKG 234

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA  IAEYF ++G NV+L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LL
Sbjct: 235 AFTATAIAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLL 294

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +EK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L
Sbjct: 295 ERTGTNEK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVL 352

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSRL +   + + KK    L  L + ++++ D+  IG Y+ G    +D+A+H  P+I 
Sbjct: 353 KSVSRLMNHVAAPEHKKAAERLRELYYTYDKSEDLINIGAYKRGTSREIDEAIHYEPLIT 412

Query: 415 DFLKQ 419
            +LKQ
Sbjct: 413 TYLKQ 417


>gi|284041512|ref|YP_003391852.1| flagellar protein export ATPase FliI [Conexibacter woesei DSM
           14684]
 gi|283945733|gb|ADB48477.1| flagellar protein export ATPase FliI [Conexibacter woesei DSM
           14684]
          Length = 489

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 158/334 (47%), Positives = 214/334 (64%), Gaps = 3/334 (0%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           FRI       GRVI+ LGKPIDG      G       +  P  ++R R+++    G+R +
Sbjct: 107 FRIRVGQDLLGRVIDGLGKPIDGMPRATNGH-PRSTNASPPDPLDRPRIDQRVDLGVRAL 165

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           D   P   GQR+G+FAGSG+GKS+LL M ARS   D  +I+LVGERGREV+EF+E  LGD
Sbjct: 166 DALVPCGRGQRLGIFAGSGVGKSSLLGMIARSTTADVNVIALVGERGREVKEFVERDLGD 225

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVVVVATSD+  ++R  A  TA  IAE+F  +G++V+L++DS+TRFA + RE+   
Sbjct: 226 ALSRSVVVVATSDQPALVRIKAAFTATAIAEHFRDQGNDVMLMMDSVTRFAMAQREVGLA 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE P  RGY  SVF++LPRLLER G +    G+IT + +VLVDGD+ N+PIAD+VRSIL
Sbjct: 286 IGEPPATRGYTPSVFAQLPRLLERSGTA--RTGSITGLYTVLVDGDDMNEPIADAVRSIL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGH+VL R LA    YP +D L SVSRL  +  S + +    ++  L+  ++E  D+  I
Sbjct: 344 DGHVVLTRELAHASHYPAIDVLQSVSRLVGEIVSPEVRAAGQAVRQLMASYKEKEDLIAI 403

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G Y+ G D  +D A+   P +  FLKQ P + SS
Sbjct: 404 GAYQGGTDPTVDAAIALRPQLDRFLKQRPDEKSS 437


>gi|126653746|ref|ZP_01725664.1| flagellum-specific ATP synthase [Bacillus sp. B14905]
 gi|126589710|gb|EAZ83846.1| flagellum-specific ATP synthase [Bacillus sp. B14905]
          Length = 441

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 235/365 (64%), Gaps = 9/365 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115
           L +V+    +IV + P     EIS+G LV   G     ++ P     G+V++++G PIDG
Sbjct: 58  LAEVVGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPE--LIGKVLDSMGNPIDG 115

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L KG +++      P  + R  + +  + G++ ID    + +GQR+G+FAGSG+GKS
Sbjct: 116 T-LLPKGLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKS 174

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL M AR+   D  +I+L+GERGREVREFIE  LG + L +S+VV ATSD+  ++R   
Sbjct: 175 TLLGMIARNTQADLNVIALIGERGREVREFIERDLGPEGLSRSIVVAATSDQPALMRIKG 234

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA  IAEYF ++G NV+L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LL
Sbjct: 235 AFTATAIAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLL 294

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +EK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L
Sbjct: 295 ERTGTNEK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVL 352

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSRL +     + KK    L  L + ++++ D+  IG Y+ G    +D+A+H  P+I 
Sbjct: 353 KSVSRLMNHVAEPEHKKAAERLRELYYTYDKSEDLINIGAYKRGTSREIDEAIHYEPLIT 412

Query: 415 DFLKQ 419
            +LKQ
Sbjct: 413 TYLKQ 417


>gi|114762158|ref|ZP_01441626.1| H+-transporting two-sector ATPase, alpha/beta subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114545182|gb|EAU48185.1| H+-transporting two-sector ATPase, alpha/beta subunit [Roseovarius
           sp. HTCC2601]
          Length = 453

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 162/414 (39%), Positives = 244/414 (58%), Gaps = 5/414 (1%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           LAQ+ +      V   G + S+      V  L+   C+GD +     + +  G+V+RI  
Sbjct: 10  LAQITQIRPARAV---GRVRSVDGTVIWVRGLAHLACIGDRLRLYHADGELGGEVLRIRD 66

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           D+V + P    E +S  D V   G   ++PS  W GRVI+  G+P+DG  SL  G L   
Sbjct: 67  DLVAMLPDEGPEGVSQDDRVAVLGPPVLAPSNDWVGRVIDPYGQPLDGR-SLSSGSLRRP 125

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
             +  PPA  R+ +    ++G+   D F P+  GQR+G+FAGSG+GKS LL+  AR    
Sbjct: 126 FRASPPPAAQRRGLGGRLRSGLAAFDTFLPIVRGQRVGLFAGSGVGKSRLLASLARGVEA 185

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D V+++L+GERGREV +F+ D LG + + +SVV+ A+SD SP+ R+   L A+T+AE+F 
Sbjct: 186 DVVVLALIGERGREVHDFVHDVLGPEGMARSVVIAASSDRSPLERRRCALAAMTVAEHFR 245

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G  VL + DSITRFA + RE+A  +GE+P  RG+P S  +++ RL ER GP     G+
Sbjct: 246 DTGRQVLFLADSITRFAEAHREVAVAAGEMPALRGFPPSTANQIMRLAERAGPGLAGSGD 305

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ SVLV G +  +PIAD +R +LDGH+VL+R +AE GR+P ++ L SVSR   +A +
Sbjct: 306 ITAIFSVLVAGSDMEEPIADILRGVLDGHVVLSREIAERGRFPAINVLRSVSRSLPEAAT 365

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +E  ++    HL+  +  +  +   G YR G D +LD+A+   P +  F  ++
Sbjct: 366 EEENDVLLQARHLLGAYARSETMIRAGLYREGEDPLLDQAIRAWPDLDTFFSEA 419


>gi|325921919|ref|ZP_08183730.1| Type III secretion system ATPase HrcN protein [Xanthomonas gardneri
           ATCC 19865]
 gi|325547621|gb|EGD18664.1| Type III secretion system ATPase HrcN protein [Xanthomonas gardneri
           ATCC 19865]
          Length = 438

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 227/374 (60%), Gaps = 5/374 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  +  +  + P G    +S    V   GR    P      GRV++ LG+P DG   +
Sbjct: 59  EVVGFSRHLALLAPFGELVGLSRETRVIGSGRPLAVPVGEALLGRVLDGLGEPADGQGPV 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             GD  ++I ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 119 -AGDGWVQIQAQAPDPMRRRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 178 MFARGTQCDVNVIVLIGERGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVG 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 238 TAIAEYFRDQGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D L S+S
Sbjct: 298 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLS 355

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  SA++++    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 356 RVMSQIVSAEQRQYAGQLRRLLAKYNEVETLLQVGEYRQGSDAVADEAIARIDAIRDFLS 415

Query: 419 QSPSDLSSEDVFQE 432
           QS   LS  D   E
Sbjct: 416 QSTDQLSDYDATLE 429


>gi|224419099|ref|ZP_03657105.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253828036|ref|ZP_04870921.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|313142608|ref|ZP_07804801.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253511442|gb|EES90101.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|313131639|gb|EFR49256.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
          Length = 432

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 178/437 (40%), Positives = 256/437 (58%), Gaps = 17/437 (3%)

Query: 7   TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           +LA L E  +  NL    G I+ +   + +   LS    LGD V    +NS+ +G V  +
Sbjct: 2   SLANLRERLNHLNLSPTFGLITKVEQGFLSANGLSP--SLGDIVRIVSENSNTIGMVTTL 59

Query: 66  NLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
                 I P    E   +GD V+ +    +I       GRVIN LG+PIDG     KGDL
Sbjct: 60  EGGSFKITPFSFVEGTKVGDKVYLNTKGLQIPVGLELLGRVINPLGEPIDG-----KGDL 114

Query: 125 S----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                M I+ +   AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M
Sbjct: 115 RAEGVMPIIRQPIAAMKRGMIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGM 174

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             R       +I+L+GERGREV EF+E  LG +L  +V++VATSD+SP++RK     A++
Sbjct: 175 IVRGAQAKIKVIALIGERGREVPEFVEKNLGGDLTNTVLIVATSDDSPLMRKYGAFAAMS 234

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF +KG++VL ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  
Sbjct: 235 VAEYFKAKGEDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-K 293

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E+ KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+RSL + G YPP++ L S SRL
Sbjct: 294 EEGKGSITAYFTVLVEGDDMSDPIADQSRSILDGHIVLDRSLTDFGIYPPINILNSASRL 353

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +     +          L    +E   +  IG Y+ G D  +D+A+ +   + D+L+QS
Sbjct: 354 MNDIAQKEHILAARKFRRLYSILKENEVLIRIGAYQAGSDKEMDEAIAKKEDMEDYLRQS 413

Query: 421 PSDLSSEDVFQEITKKL 437
             ++     +QE TKKL
Sbjct: 414 YDEVWD---YQESTKKL 427


>gi|117928052|ref|YP_872603.1| flagellar protein export ATPase FliI [Acidothermus cellulolyticus
           11B]
 gi|117648515|gb|ABK52617.1| type III secretion system ATPase, FliI/YscN [Acidothermus
           cellulolyticus 11B]
          Length = 439

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 174/403 (43%), Positives = 245/403 (60%), Gaps = 19/403 (4%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
           V  ++T       +GD V+ +G+    L +V+ ++ + +   P+G    +++G LV   G
Sbjct: 33  VGLSITAAGIRAAIGDVVIVEGRQP-TLAEVVALHDESLACMPLGDVSGVAVGALVTPTG 91

Query: 92  RFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPP-AMNRQRVEKGFK 146
                P      GRV++ LG+PIDG     KG+L   I   +   PP  + R R+ +   
Sbjct: 92  GPLTVPVGDALLGRVLDGLGRPIDG-----KGELRDTIRVGLDATPPHPLRRTRISEQLS 146

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
            G+RV+D  TP   GQR+G+FAGSG+GKS+LLSM AR    D  +I+LVGERGREVREF+
Sbjct: 147 LGVRVLDTMTPCGRGQRLGIFAGSGVGKSSLLSMIARGTEADVSVIALVGERGREVREFL 206

Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E+ LG + L +SVVVVATSDE  +LR  A   A  IAE+F   G +V+L++DSITRFA +
Sbjct: 207 ENDLGEEGLARSVVVVATSDEPALLRLRAAFVATRIAEWFRDLGRHVILMMDSITRFAMA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            REI  + GE    RGYP SVF+ LP+LLER G    E G+IT + +VLV+GD+ N+PIA
Sbjct: 267 QREIGLSVGEPAATRGYPPSVFALLPKLLERAGAG--EHGSITGLYTVLVEGDDMNEPIA 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+ RSILDGH+ L+R LA  G YP VD L S+SRL     +A ++   + L  ++    +
Sbjct: 325 DTARSILDGHVTLSRRLATSGHYPAVDVLESISRLTGAITTAQQRDDATFLRRILAAHRD 384

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ-----SPSD 423
            R++  IG Y PG +  +D A+   P I DFL+Q     +P+D
Sbjct: 385 ARELIDIGAYVPGSNPDVDTALRLQPRITDFLRQDIRAVTPAD 427


>gi|108762697|ref|YP_630662.1| FliI/YscN family ATPase [Myxococcus xanthus DK 1622]
 gi|108466577|gb|ABF91762.1| ATPase, FliI/YscN family [Myxococcus xanthus DK 1622]
          Length = 437

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 167/398 (41%), Positives = 236/398 (59%), Gaps = 8/398 (2%)

Query: 43  VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100
           V +G+ V+ + +N   +  +V+    D V + P+G    I     V   G+   I     
Sbjct: 39  VRVGELVLIKSRNRGAVKAEVVGFQGDEVMLMPLGELHGIGPDSEVIPTGKPLSIKCGEA 98

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV+N +G+P+DG     +G +   +    P    RQR+E+    G+R ID    +  
Sbjct: 99  LLGRVLNGIGEPMDGHPLPEEGLIDWSVDRDCPDPFTRQRIERPLPLGVRCIDGLLTVGE 158

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKSTL+   AR+   D  +++L+GERGREVREFIED +G + +K+SV+
Sbjct: 159 GQRVGLFAGSGVGKSTLMGQIARNTKADLCVVALIGERGREVREFIEDAMGEEGMKRSVL 218

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD+  ++R  A   A  IAEYF  +G NVL +LD++TR A + REI    GE P  
Sbjct: 219 VCATSDQPSLVRLRAAYVATAIAEYFRERGGNVLFMLDTVTRLARAQREIGLAVGEPPAR 278

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVFS LPR+LER G S  EKG  TA+ + LV G +  +PIAD VR ILDGH +LN
Sbjct: 279 QGYPPSVFSMLPRILERTGNS--EKGKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILN 336

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+L E  ++P +D LAS+SR+     S D KK    L  L+  +E+ RD+ L+G Y+ G 
Sbjct: 337 RALGERNQWPAMDVLASLSRVMSGIVSKDHKKAAGRLRELLSTYEKQRDLILLGAYQYGT 396

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           D   D+A+ +   I DFLKQ   D  S   F+E  ++L
Sbjct: 397 DPRTDQAIDKYDAIIDFLKQ---DTHSNSGFEETVEQL 431


>gi|296274002|ref|YP_003656633.1| FliI/YscN family ATPase [Arcobacter nitrofigilis DSM 7299]
 gi|296098176|gb|ADG94126.1| ATPase, FliI/YscN family [Arcobacter nitrofigilis DSM 7299]
          Length = 435

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 167/409 (40%), Positives = 242/409 (59%), Gaps = 7/409 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPV 75
           NL++  G I+ I+S   T+  +   V +GD V  + ++     LG +  +  D   I P 
Sbjct: 15  NLIIPFGRITHISST--TIKAVGIEVAVGDIVKIESQHHLYTVLGMIASVESDGFKIVPF 72

Query: 76  GIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E   + D VF       +       GRV+NALG+PID    +   + +  I     P
Sbjct: 73  SFIEGFRINDKVFLQKDGLTVKSGYGLLGRVVNALGEPIDKKGKVKDLEQNSAINKLSIP 132

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
           A+ R  +++ F TG++ ID       GQ++G+FAGSG+GKSTL+ M  +       +++L
Sbjct: 133 ALERGIIDERFSTGVKAIDSMLTSGKGQKVGIFAGSGVGKSTLMGMIVKGCEAQIKVVAL 192

Query: 195 VGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           +GERGRE+ EFI   L +NL+ ++++ ATSDES ++RK    TA+ IAE+F  KG +VLL
Sbjct: 193 IGERGREIPEFIHYNLNNNLENTIIIAATSDESALMRKYGAFTAMAIAEFFRDKGHDVLL 252

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + REI  + GE PV+RGYP SVF+ LP+L+ER G +  E G+ITA  +VL
Sbjct: 253 MMDSVTRFAMAQREIGLSIGEPPVSRGYPPSVFALLPQLMERAGNT--ELGSITAFFTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ NDPIAD  RSILDGHIVL R L E+G+YPP+D L S SR+ DK  S +      
Sbjct: 311 VDGDDMNDPIADQSRSILDGHIVLTRELTEQGQYPPIDLLRSASRVMDKVVSPEHYNGFL 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            L  ++   +E   +  +G Y+ G+D  LD A+ +   I  FL Q  S+
Sbjct: 371 KLKRVLSLIKENEILIRVGAYKQGMDKELDDALAKREKIKTFLFQGTSE 419


>gi|304316905|ref|YP_003852050.1| ATPase, FliI/YscN family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778407|gb|ADL68966.1| ATPase, FliI/YscN family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 438

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 173/411 (42%), Positives = 255/411 (62%), Gaps = 16/411 (3%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPV 75
           K+ +   G +S +  +  T+  +     +GD    +  N + +  +V+    D VY+ P+
Sbjct: 17  KSFIKYYGKVSQVVGL--TIESIGPISNVGDVCEIKSINGNTIYAEVMGFKDDKVYLMPL 74

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM---SK 131
           G  + I  G+ V   G + +I       GRVI+ALG PIDG     KG +  + +   + 
Sbjct: 75  GDMDGIGPGNSVISTGQKLKIGVGEELLGRVIDALGNPIDG-----KGPIKFKKLVSTNN 129

Query: 132 VPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           VPP  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  
Sbjct: 130 VPPNPIERKRIREAMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMIARNAKSDIN 189

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGREV EFIE  LG D LK+S++VV+TSD   ++R    +TA +IAEYF  +G
Sbjct: 190 VIALIGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMTATSIAEYFRDQG 249

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL ++DS+TRFA + REI  + GE PV+RGY  SVFS LP+LLER G ++   G+ITA
Sbjct: 250 LDVLFMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSAKN--GSITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+ N+PI D+VR ILDGHIVL+R LA +G+YP +D LAS+SR+ +   S + 
Sbjct: 308 LYTVLVDGDDLNEPITDAVRGILDGHIVLSRKLANKGQYPAIDILASISRVMNDIVSDEH 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           K L S    ++  +EE+ D+  IG Y  G +  +D+A+     + +++KQ+
Sbjct: 368 KNLSSKFKSILSVYEESEDLINIGAYAKGSNPKIDEAILLHDDMINYIKQT 418


>gi|83647858|ref|YP_436293.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
 gi|83635901|gb|ABC31868.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
          Length = 456

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 156/362 (43%), Positives = 226/362 (62%), Gaps = 3/362 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + VY+ P+   E +  G  V    G  RI   AC  GRV++  G+P+DG   L
Sbjct: 60  EVVGFSDERVYLMPLAAVEGLQPGAKVKPMSGVGRIGVGACLLGRVLDGAGEPLDGRGPL 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            + +  +E+       ++R  + +    GIR I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 120 -QAEHHVELFGAPINPLHRAPIREKLDVGIRAINSLLTVGIGQRLGLFAGSGVGKSMLLG 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D +++ LVGERGREV+EFIED LG+  L+++VVV + +D+SP++R  A +  
Sbjct: 179 MMTRFTTADIIVVGLVGERGREVKEFIEDILGEEGLRRAVVVASPADDSPLMRLRAAVLT 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G
Sbjct: 239 TRIAEYFRDLGKNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERAG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVLNR LAEEG YP +D  AS+S
Sbjct: 299 NGKPGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRRLAEEGHYPAIDVEASIS 358

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + D  +       L  R+++TRD+  +G Y PG D   D A+ + P +  FL+
Sbjct: 359 RVMPQVTTPDYLQRAQRFKQLYARYQQTRDLISVGAYAPGSDKETDYAIERFPHMRKFLQ 418

Query: 419 QS 420
           QS
Sbjct: 419 QS 420


>gi|227873550|ref|ZP_03991793.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227840596|gb|EEJ50983.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 436

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 158/344 (45%), Positives = 224/344 (65%), Gaps = 5/344 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R R+       GR+I+A G P+DG +   + D      S + P ++R  + +    GI+ 
Sbjct: 89  RLRVPVGDFLKGRIIDAQGNPMDGGEPFPESDFYTVNNSYMNP-LDRPPIRERLHFGIKA 147

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID    +  GQRIG+FAGSG+GKSTL+ M AR+   D  +I+LVGERGRE+ EF+E  +G
Sbjct: 148 IDGLNTVGKGQRIGIFAGSGVGKSTLMGMIARNVKTDINVIALVGERGREILEFVEKDMG 207

Query: 212 D-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           +  +K++V+VVATSD+  +LR  APL A TIAEYF  +G +VLL++DS+TRFA + REI 
Sbjct: 208 EEGMKRTVLVVATSDQPAMLRLKAPLVATTIAEYFRDRGMDVLLMMDSLTRFAMAQREIG 267

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             +GE P+ARGY  S+++E PRLLER G  +K  G+IT V +VLV+GD+ N+PIAD+VR 
Sbjct: 268 LATGEPPIARGYTPSIYAEFPRLLERAGAFKK--GSITGVYTVLVEGDDTNEPIADTVRG 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL+R+LA E  YP +D   S+SRL  +  S + KK  S + + +  +++  D+ 
Sbjct: 326 ILDGHIVLSRALAAENHYPAIDIGMSISRLMAELVSQEHKKYASRMRNTLGLYQKNADLI 385

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
            IG Y+ G D  LD+AV + P I DFL Q   +  S ED   ++
Sbjct: 386 AIGAYKKGTDPKLDEAVDKYPAINDFLMQGTGEAFSYEDTVMQM 429


>gi|188992464|ref|YP_001904474.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734224|emb|CAP52432.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris]
          Length = 438

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 5/374 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  +  +  + P G    +S    V   GR    P  +   GRV++ LG+P DG   L
Sbjct: 59  EVVGFSRTLALLAPFGELVGLSRQTRVIGLGRPLAVPVGSALLGRVLDGLGEPADGQGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             GD  ++I ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 119 -AGDDWVQIQAQAPDPMRRRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 178 MFARGTQCDVNVIVLIGERGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVG 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 238 TAIAEYFRDRGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A   +YP +D L S+S
Sbjct: 298 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAARNQYPAIDVLGSLS 355

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  SA++++    L  L+ +  E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 356 RVMSQIVSAEQRQYAGQLRRLLAKHNEVETLLQVGEYRHGSDAVADEAIARIDAIRDFLS 415

Query: 419 QSPSDLSSEDVFQE 432
           Q    LS  D   E
Sbjct: 416 QPTDQLSDYDTILE 429


>gi|289578431|ref|YP_003477058.1| flagellar protein export ATPase FliI [Thermoanaerobacter italicus
           Ab9]
 gi|297544707|ref|YP_003677009.1| flagellar protein export ATPase FliI [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528144|gb|ADD02496.1| flagellar protein export ATPase FliI [Thermoanaerobacter italicus
           Ab9]
 gi|296842482|gb|ADH60998.1| flagellar protein export ATPase FliI [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 437

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 165/361 (45%), Positives = 233/361 (64%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + VY+ P+G  E I  G  V   G+  R+S      GR+++ LG PID    +
Sbjct: 59  EVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRVSVGKELLGRILDGLGNPIDSKGPV 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K + S+ I +  P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL 
Sbjct: 119 -KFEKSIPINNVPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GERGREV EF+E  LG+  LKKSVVVVATSD   ++R    +TA
Sbjct: 178 MMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G +VLL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER G
Sbjct: 238 TAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERSG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S+K  G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LASVS
Sbjct: 298 CSKK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVS 355

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +   + + K+L++    ++  + E  D+  IG Y  G +  +D+A+     + +FL+
Sbjct: 356 RVMNDIITEEHKELIARFKDILASYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNFLR 415

Query: 419 Q 419
           Q
Sbjct: 416 Q 416


>gi|299534784|ref|ZP_07048114.1| flagellum-specific ATP synthase [Lysinibacillus fusiformis ZC1]
 gi|298729872|gb|EFI70417.1| flagellum-specific ATP synthase [Lysinibacillus fusiformis ZC1]
          Length = 444

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 161/365 (44%), Positives = 234/365 (64%), Gaps = 9/365 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115
           L +V+    +IV + P     EIS+G LV   G     ++ P     G+V++++G PIDG
Sbjct: 61  LAEVVGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPE--LIGKVLDSMGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L +G +++      P  + R  + +  + G++ ID    + +GQR+G+FAGSG+GKS
Sbjct: 119 T-LLPRGLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL M AR+   D  +I+L+GERGREVREFIE  LG + L +S+VV ATSD+  ++R   
Sbjct: 178 TLLGMIARNTQADLNVIALIGERGREVREFIERDLGAEGLSRSIVVAATSDQPALMRIKG 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA  IAEYF ++G NV+L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LL
Sbjct: 238 AFTATAIAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLL 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +EK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L
Sbjct: 298 ERTGTNEK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVL 355

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSRL +       KK    L  L + ++++ D+  IG Y+ G    +D+A+H  P+I 
Sbjct: 356 KSVSRLMNHVAEPTHKKAAERLRELYYTYDKSEDLINIGAYKRGTSKEIDEAIHYEPLIT 415

Query: 415 DFLKQ 419
            +LKQ
Sbjct: 416 AYLKQ 420


>gi|254509752|ref|ZP_05121819.1| H+-transporting two-sector ATPase, flagellum-specific
           [Rhodobacteraceae bacterium KLH11]
 gi|221533463|gb|EEE36451.1| H+-transporting two-sector ATPase, flagellum-specific
           [Rhodobacteraceae bacterium KLH11]
          Length = 454

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 158/387 (40%), Positives = 237/387 (61%), Gaps = 3/387 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S +T     +  L+Q   +GD   + +    D  G+V+ ++ D +++ P    + +S
Sbjct: 24  GRVSGVTGGVIRIDGLAQRARIGDHLTLRRNSGPDLQGEVLHVDADQIHMLPGAAPDGVS 83

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           LGD V        +P   W GRVI+  G P+DG   L  G    ++M   P A++R+ + 
Sbjct: 84  LGDPVSLDQLPAFAPGMHWLGRVIDPFGAPLDGKPLL-PGTQECDLMQTPPAAVSRKPLG 142

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
              +TG+ +++   P+  GQRIG+FAGSG+GKSTLL+  AR+   D V+++LVGERGREV
Sbjct: 143 ARMETGLAILNTMLPIVQGQRIGLFAGSGVGKSTLLATLARTMQADAVVVALVGERGREV 202

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            EF+E  LG D +++SVVV ATSD+S + R+    +A+++AEY   +G NVL + DS+TR
Sbjct: 203 NEFVETALGADGMRRSVVVAATSDQSALARRRCAWSAMSVAEYLRDQGLNVLFLADSVTR 262

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + REIA  +GE    RG+P SV   +  L ER GP   ++G+ITAV SVLV G + +
Sbjct: 263 FAEAHREIAVATGESASLRGFPPSVTPLIANLCERAGPGTAQQGDITAVFSVLVAGSDMD 322

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD +R +LDGHIVL+R +AE GRYP +D   SVSR    A + DE ++++    L+ 
Sbjct: 323 EPIADILRGVLDGHIVLSRDIAERGRYPAIDLSKSVSRSLPGAATEDENQVITDARKLVG 382

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVH 408
            +E++  +   G Y  G D +LD+AV 
Sbjct: 383 SYEQSEVMIKAGLYAEGADPLLDRAVR 409


>gi|21230693|ref|NP_636610.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66769312|ref|YP_244074.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21112282|gb|AAM40534.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66574644|gb|AAY50054.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 442

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 5/374 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  +  +  + P G    +S    V   GR    P  +   GRV++ LG+P DG   L
Sbjct: 63  EVVGFSRTLALLAPFGELVGLSRQTRVIGLGRPLAVPVGSALLGRVLDGLGEPADGQGPL 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             GD  ++I ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 A-GDDWVQIQAQAPDPMRRRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLIG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A   +YP +D L S+S
Sbjct: 302 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAARNQYPAIDVLGSLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  SA++++    L  L+ +  E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVSAEQRQYAGQLRRLLAKHNEVETLLQVGEYRHGSDAVADEAIARIDAIRDFLS 419

Query: 419 QSPSDLSSEDVFQE 432
           Q    LS  D   E
Sbjct: 420 QPTDQLSDYDTILE 433


>gi|226225734|ref|YP_002759840.1| flagellum-specific ATP synthase [Gemmatimonas aurantiaca T-27]
 gi|226088925|dbj|BAH37370.1| flagellum-specific ATP synthase [Gemmatimonas aurantiaca T-27]
          Length = 457

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 166/419 (39%), Positives = 250/419 (59%), Gaps = 16/419 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G ++ +  +    T +   V LG    V +  ++   L +V+  N   V + P+G  + +
Sbjct: 34  GRVTRVVGLVVEATGID--VGLGSLCRVTNHARDRSVLAEVVGFNERNVLLMPLGELDGL 91

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMN 137
             G  V   GR F +       GRV+N LG PIDG    D++ +  LS E     P  + 
Sbjct: 92  HAGASVQPLGRSFGVDVGPGLLGRVLNGLGHPIDGKGKLDTIERVSLSAE----PPNPLQ 147

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +++  +TG+R ID    +  GQR+G+FAGSG+GKST+L M ARS   D  +I+L+GE
Sbjct: 148 RETIDRPMETGVRAIDGLLTIGRGQRVGIFAGSGVGKSTMLGMVARSAKADVNVIALLGE 207

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREF+E+ LG + L +SVV+VAT D++ ++R    L A  IAEYF  +G  VLL++
Sbjct: 208 RGREVREFLENSLGAEGLARSVVIVATGDQAALVRARGALVATAIAEYFRDQGKEVLLMV 267

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + REI   +GE P  +GYP SVF+ LPRLLER G    E+G IT + +VLVD
Sbjct: 268 DSVTRVAMAWREIGLATGEPPTTKGYPPSVFANLPRLLERAG--NGERGGITGIYTVLVD 325

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+P+AD+ RSILDGHIVL R LA +  +P +D L S SR+ D   +  +++  +++
Sbjct: 326 GDDFNEPVADAARSILDGHIVLTRRLAAQNHFPAIDVLDSKSRVKDHITNEAQRRSGAAM 385

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434
             L   + E  D+ ++G Y+ G D  +D A+     + +FL+Q P +++   D +Q + 
Sbjct: 386 LRLEAAYREKEDLIMVGAYQKGSDPYVDAAIAYRHRVLEFLQQRPDEITPYGDTYQALN 444


>gi|219670156|ref|YP_002460591.1| peptidase C14, ICE, catalytic subunit p20, active site
           [Desulfitobacterium hafniense DCB-2]
 gi|219540416|gb|ACL22155.1| Peptidase C14, ICE, catalytic subunit p20, active site
           [Desulfitobacterium hafniense DCB-2]
          Length = 433

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 167/424 (39%), Positives = 253/424 (59%), Gaps = 12/424 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L+V  G ++ I  V   +      V +G++  +H  +  +   +V+        + P+ 
Sbjct: 15  DLIVSHGRVAKI--VGLMIESDGPRVSVGEYCRIHTQQGKEIPAEVVGFRNSTTLLMPLA 72

Query: 77  IGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E I+ GD +V    +  +       GR+++ LG+P+DG   + + D  ++  +  P A
Sbjct: 73  ELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPMVTQRDYPLQ--NAPPSA 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R R+      G+R +D    +  GQRIG+FAGSG+GKSTLL M AR+      +I+LV
Sbjct: 131 FLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAGVNVIALV 190

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+R+FIE  LG+  L++SV+VVATSD+  ++R  A  TA  IAEYF  +G +VLL
Sbjct: 191 GERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRDQGQDVLL 250

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + RE+   +GE P  RGYP SVF+ LP+LLER G SE   G+IT + +VL
Sbjct: 251 MMDSVTRFAMAQREVGLTAGEPPATRGYPPSVFAMLPKLLERSGMSEI--GSITGIYTVL 308

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+HN+PIAD+VR ILDGHIVL R LA +  YP +D L SVSR+ +   + + K+L  
Sbjct: 309 VDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAPEHKELAG 368

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L   +  + + +D+  IG Y  G +  +D A+  +  I  FL+Q   D+  +  F ++ 
Sbjct: 369 KLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQ---DVEEKVSFDQML 425

Query: 435 KKLQ 438
           ++LQ
Sbjct: 426 RQLQ 429


>gi|197104319|ref|YP_002129696.1| flagellum-specific ATP synthase FliI [Phenylobacterium zucineum
           HLK1]
 gi|196477739|gb|ACG77267.1| flagellum-specific ATP synthase FliI [Phenylobacterium zucineum
           HLK1]
          Length = 449

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 152/343 (44%), Positives = 216/343 (62%), Gaps = 7/343 (2%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+  W GR ++A G PIDG   L +G  S  + +  P A  R RV +    G+R +++
Sbjct: 91  VRPTRAWLGRTVDAFGNPIDGKGPLPQGLASYPLRAPPPAAHARARVGERLDLGVRAMNV 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           FT  C GQR+GVFAGSG+GKS LLSM A++   D V++ L+GERGREVREFIE+ LG + 
Sbjct: 151 FTTCCRGQRLGVFAGSGVGKSVLLSMLAKNADCDAVVVGLIGERGREVREFIEETLGEEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK+++VVVATSDE  + R+ A    + IAE+   +   VL ++DS+TRFA + REI   +
Sbjct: 211 LKRAIVVVATSDEPALKRRQAAYMTMAIAEFLRDQDLEVLCLMDSVTRFAMAQREIGLAA 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328
           GE P  +GY  +VF+ELP+LLER GP          G IT + +VLVDGD+HN+PIAD+V
Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTRAGPITGLFTVLVDGDDHNEPIADAV 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIV+ R++AE GR+P ++ L S+SR         E+++V      +  +    +
Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQQPHEREVVKQARQALSAYANMEE 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF 430
           +  IG YR G D ++D+A+   P +  FL Q P D +  E+ F
Sbjct: 391 LIRIGAYRAGADPLIDRAIELNPSLEAFLSQDPDDATGLEESF 433


>gi|306820116|ref|ZP_07453764.1| flagellar protein export ATPase FliI [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551894|gb|EFM39837.1| flagellar protein export ATPase FliI [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 439

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 165/367 (44%), Positives = 233/367 (63%), Gaps = 5/367 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           + +V+    + V + P+G  + IS G  V   G    +       GRV++ LG+PID  +
Sbjct: 58  MAEVVGFTENAVLLMPLGDMQGISPGATVIASGNSHEVQVGDSLLGRVLDGLGQPIDDKE 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           SL     +  + +  P  ++R R+ +    G++VID       GQRIG+FAGSG+GKSTL
Sbjct: 118 SLNVSR-AYPVNNMPPNPLSRMRIREPLPLGVKVIDGMLTCGRGQRIGIFAGSGVGKSTL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I L+GERGREV+EFIE+ L +  L +SVVVVATSD+  ++RK   L
Sbjct: 177 LGMIARNTVADINVIGLIGERGREVKEFIENDLKEEGLSRSVVVVATSDQPALVRKKGAL 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G NV+L++DS+TRF+ + RE+    GE PV +GYP SVF+ELPRLLER
Sbjct: 237 LATSIAEYFRDQGKNVILMMDSLTRFSMAQREVGLAIGEPPVTKGYPPSVFAELPRLLER 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D LAS
Sbjct: 297 SGNSDK--GSITALYTVLVDGDDMNEPIADTVRGILDGHIVLSRALANKNHYPAIDVLAS 354

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+     S +  K V  +  L+  ++++ D+  IG Y  G    +D A+ +   I +F
Sbjct: 355 VSRVMPSIISGEHMKKVGVMRDLLATYKDSEDLISIGAYVKGSSKKVDFAIEKNDEINNF 414

Query: 417 LKQSPSD 423
           LKQ   D
Sbjct: 415 LKQGVHD 421


>gi|315186386|gb|EFU20146.1| type III secretion system ATPase, FliI/YscN [Spirochaeta
           thermophila DSM 6578]
          Length = 448

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 164/361 (45%), Positives = 226/361 (62%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +VI +    VY+      E I +GD++   G    I  S    GRV++A G PID    L
Sbjct: 57  EVIGLKGSTVYLMGYQDPEGIQVGDVIEAMGEPLSIRVSEGLLGRVLDARGMPIDDKGPL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G +   +    P  + R+R+E+   TGIR +D   P+  GQR+GVF+GSG+GKSTLL 
Sbjct: 117 PPG-IRYPVQGGPPHVLKRRRIEEQIATGIRALDGLLPIGKGQRVGVFSGSGVGKSTLLG 175

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GERGREV EFIE  LG+  LK+SVVVV+TSD   + R      A
Sbjct: 176 MVARNTNADVNVIALIGERGREVAEFIEHDLGEEGLKRSVVVVSTSDTPAVARYRGAFVA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           V IAEYF  +G +V+L+ DS+TRFA ++REI    GE P  RGYP SVFS LP+LLER G
Sbjct: 236 VAIAEYFRDQGKDVMLLFDSVTRFARALREIGLALGESPATRGYPPSVFSTLPKLLERCG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S  EKG IT   SVLV+GD+ ++P++D+VR ILDGH+VL+R LA+   YP +D L+SVS
Sbjct: 296 TS--EKGTITGFFSVLVEGDDMDEPVSDAVRGILDGHVVLSRRLAQRQHYPAIDVLSSVS 353

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA K  +   ++    +   +  ++ET D+  +G Y  G +  +DKA+ ++P I  FL+
Sbjct: 354 RLAPKITTPPVREAARRVLRWLAAYQETEDLINVGAYARGSNPEVDKAIEKLPDINAFLR 413

Query: 419 Q 419
           Q
Sbjct: 414 Q 414


>gi|294665982|ref|ZP_06731245.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604230|gb|EFF47618.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 442

 Score =  292 bits (747), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E+   TG+R++D  T L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGEN--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVPSDHSQAAGQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419

Query: 419 QSPSDLSSED 428
           Q    LS+ D
Sbjct: 420 QPTDQLSAYD 429


>gi|227876742|ref|ZP_03994851.1| H(+)-transporting two-sector ATPase [Mobiluncus mulieris ATCC
           35243]
 gi|269976269|ref|ZP_06183265.1| flagellum-specific ATP synthase [Mobiluncus mulieris 28-1]
 gi|306817689|ref|ZP_07451431.1| flagellar protein export ATPase FliI [Mobiluncus mulieris ATCC
           35239]
 gi|307699792|ref|ZP_07636843.1| ATPase FliI/YscN family protein [Mobiluncus mulieris FB024-16]
 gi|227842639|gb|EEJ52839.1| H(+)-transporting two-sector ATPase [Mobiluncus mulieris ATCC
           35243]
 gi|269935598|gb|EEZ92136.1| flagellum-specific ATP synthase [Mobiluncus mulieris 28-1]
 gi|304649503|gb|EFM46786.1| flagellar protein export ATPase FliI [Mobiluncus mulieris ATCC
           35239]
 gi|307614830|gb|EFN94048.1| ATPase FliI/YscN family protein [Mobiluncus mulieris FB024-16]
          Length = 441

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 170/413 (41%), Positives = 245/413 (59%), Gaps = 9/413 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+  +   V  L    C    VV  G  +    +V+ ++  +    P+   + + +
Sbjct: 22  GEVESVVGLSVQVRGLD---CRVGEVVLVGDGTGTPAEVVALDAGLASCMPLDNLDGLRV 78

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G     P      GRVI+A G+PIDG   +   D  + I    P A+ R R++
Sbjct: 79  GSPVRGTGLPATVPVGPALLGRVIDAAGRPIDGKGPIYVAD-HVPIHGSAPNALERARID 137

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
                G+RV+D    L  GQRIG+FAGSG+GKSTL+SM AR    +  +I+LVGERGREV
Sbjct: 138 TPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIARGTNAEVCVIALVGERGREV 197

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+ED LG+  L +SVVVVATSDESP+LRK A  TA  +AEY+   G +VLL++DS+TR
Sbjct: 198 REFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRVAEYYRDAGRHVLLMMDSLTR 257

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
              + REI  + GE P  RGYP S FS + +LLER G      G++T + +VLVDGD+HN
Sbjct: 258 TCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAGSGAV--GSVTGIYTVLVDGDDHN 315

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD  RSILDGH+VL+R LA  G YP VD LAS+SR+A K  + ++K+  ++L  ++ 
Sbjct: 316 EPIADQARSILDGHVVLDRKLAVAGHYPAVDALASISRVASKVCTREQKEAATALRQVMG 375

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
                +D+  +G Y+ G +  +D A+     I  FL Q   + ++ ++ +Q++
Sbjct: 376 AKRGVQDLLDVGAYQQGTNPEVDLALQYDEEIEAFLTQKTDEKITFDEAWQQL 428


>gi|159024047|gb|ABW87275.1| HrcN [Xanthomonas fuscans subsp. fuscans]
          Length = 442

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E+   TG+R++D  T L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGEN--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVPSDHSQAARQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419

Query: 419 QSPSDLSSED 428
           Q    LS+ D
Sbjct: 420 QPTDQLSAYD 429


>gi|158320515|ref|YP_001513022.1| flagellar protein export ATPase FliI [Alkaliphilus oremlandii
           OhILAs]
 gi|158140714|gb|ABW19026.1| flagellar protein export ATPase FliI [Alkaliphilus oremlandii
           OhILAs]
          Length = 437

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 170/425 (40%), Positives = 258/425 (60%), Gaps = 10/425 (2%)

Query: 7   TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDN-LGQVI 63
           +L +  E  SK +L+   GY+S +  +  T+  +   V LG+   ++  K ++  L +V+
Sbjct: 5   SLKKYEEALSKLDLIKYTGYVSQVIGL--TIESVGPAVKLGEMCKIYSLKGTEPILSEVV 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                 V + P+G  E I  G  V   G   ++S      GRV++ LG PID D  L   
Sbjct: 63  GFKEKKVLLMPLGEMEGIGPGSKVEALGITMQVSVGEELLGRVLDGLGNPID-DKELLNT 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           + +  +M+  P  + R ++ +    G++ +D      +GQRIG+FAGSG+GKSTLL M A
Sbjct: 122 NKTYPVMAAPPNPLKRTKINEPLALGVKTLDGLLTCGNGQRIGIFAGSGVGKSTLLGMIA 181

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +I+L+GERGREVREFIE+ L +  LK+SVV+VATSD+  ++RK   L A  +
Sbjct: 182 RNTQADINVIALIGERGREVREFIENDLQEEGLKRSVVIVATSDQPALIRKKGALLATAV 241

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G NV+L++DS+TRF+ + RE+    GE PV+RGY  SVF+ELP+LLER G S 
Sbjct: 242 AEYFRDQGKNVILMMDSLTRFSMAQREVGLAVGEPPVSRGYTPSVFAELPKLLERSGTS- 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT + +VLVDGD+ N+PIAD+VR ILDGHIVL+R +A    YP +D LASVSR+ 
Sbjct: 301 -DKGSITGLYTVLVDGDDMNEPIADTVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVM 359

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     + + +  L+  +  + D+  IG Y  G +  +D++++++  I  FL+Q  
Sbjct: 360 PNIVEKKHLLIANEIKELLSTYNSSEDLINIGAYIKGTNRRIDESINKIDSINSFLRQDV 419

Query: 422 SDLSS 426
            D ++
Sbjct: 420 HDKTT 424


>gi|170742092|ref|YP_001770747.1| flagellum-specific ATP synthase [Methylobacterium sp. 4-46]
 gi|168196366|gb|ACA18313.1| flagellar protein export ATPase FliI [Methylobacterium sp. 4-46]
          Length = 451

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 153/333 (45%), Positives = 215/333 (64%), Gaps = 2/333 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I PS  W GRV++ALG+P+DG   L  G L   + +  PPA  R RV      G+R I+ 
Sbjct: 105 IRPSPAWLGRVVDALGRPVDGRGPLPPGPLPYPLRADPPPAHARARVGPPLDLGVRCINT 164

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
           F  +C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGERGREV+EF++D LG + 
Sbjct: 165 FLTMCVGQRMGIFAGSGVGKSVLLSMLARAAACDVAVIGLVGERGREVQEFLQDDLGPEG 224

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVVVATSDE  ++R+ A    + +AE F   G  VL ++DS+TRFA + R++   +
Sbjct: 225 LARSVVVVATSDEPALMRRNAAYVTLALAESFRDAGAQVLCMIDSVTRFAMAQRDVGLAA 284

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P A+GY  +VFSELPRLLER GP     G+I+ + +VLV+GD+HN+P+AD+VR ILD
Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGTG-AGSISGLFTVLVEGDDHNEPVADAVRGILD 343

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIV+ R +AE GRYP ++ L SVSR   +A        V     L+  + +  ++  +G
Sbjct: 344 GHIVMERRIAEGGRYPAINVLRSVSRTMPRACDPAFLPTVQRARWLLSTYADMEELIRLG 403

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            YRPG    +D+A+  +P +  F++Q   + +S
Sbjct: 404 AYRPGSSPDVDEAIGLMPDLEAFMRQGKEEATS 436


>gi|307718601|ref|YP_003874133.1| hypothetical protein STHERM_c09130 [Spirochaeta thermophila DSM
           6192]
 gi|306532326|gb|ADN01860.1| hypothetical protein STHERM_c09130 [Spirochaeta thermophila DSM
           6192]
          Length = 448

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 164/361 (45%), Positives = 225/361 (62%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +VI +    VY+      E I +GD++   G    I  S    GRV++A G PID    L
Sbjct: 57  EVIGLKGSTVYLMGYRDPEGIQVGDVIEAMGEPLSIRVSEGLLGRVLDARGMPIDDKGPL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G +   +    P  + R+R+E+   TGIR +D   P+  GQR+GVF+GSG+GKSTLL 
Sbjct: 117 PPG-IRYPVQGGPPHVLKRRRIEEQIATGIRALDGLLPIGKGQRVGVFSGSGVGKSTLLG 175

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GERGREV EFIE  LG+  LK+SVVVV+TSD   + R      A
Sbjct: 176 MVARNTNADVNVIALIGERGREVAEFIEHDLGEEGLKRSVVVVSTSDTPAVARYRGAFVA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           V IAEYF  +G +V+L+ DSITRFA ++RE+    GE P  RGYP SVFS LP+LLER G
Sbjct: 236 VAIAEYFRDQGKDVMLLFDSITRFARALREMGLALGESPATRGYPPSVFSTLPKLLERCG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S  EKG IT   SVLV+GD+ ++P++D+VR ILDGH+VL+R LA+   YP +D L+SVS
Sbjct: 296 TS--EKGTITGFFSVLVEGDDMDEPVSDAVRGILDGHVVLSRRLAQRQHYPAIDVLSSVS 353

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA K  +   +     +   +  ++ET D+  +G Y  G +  +DKA+ ++P I  FL+
Sbjct: 354 RLAPKITTPPVRDAARRVMRWLAAYQETEDLINVGAYARGSNPEVDKAIEKLPDINAFLR 413

Query: 419 Q 419
           Q
Sbjct: 414 Q 414


>gi|85706173|ref|ZP_01037268.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. 217]
 gi|85669337|gb|EAQ24203.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. 217]
          Length = 444

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 158/397 (39%), Positives = 241/397 (60%), Gaps = 5/397 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G +S++      ++ LS    LGD VV Q ++   L G+VIR+    + + P    + ++
Sbjct: 18  GRVSAVQGSSLQISGLSAEARLGDRVVIQRRSDGALHGEVIRLEAASLVVLPDTSPDGVA 77

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-V 141
           LGD V       ++PS  W GR+I+  G+P+DG   L   ++    +   PPA  R+R +
Sbjct: 78  LGDRVILGQENSVAPSHSWLGRIIDPFGEPLDGRPLLRGANI--RALRADPPAPTRRRTL 135

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
               +TG+   +   P+  GQR+G+FAGSG+GKS LL   AR    D V+I+L+GERGRE
Sbjct: 136 GARLETGMVAFNTVLPIVRGQRVGLFAGSGVGKSMLLGHLARHMQADVVVIALIGERGRE 195

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           +REF+E  LG + +++SV+V ATSD SP++R+    TA+ +AE+F  +G  VL + DSIT
Sbjct: 196 LREFVETVLGPEGMRRSVIVAATSDRSPLIRRRCAWTAMAVAEFFRDEGKQVLFLADSIT 255

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + RE+AT +GE+P  RG+P+S    +  L ER GP  +  G+ITA+++VLV G + 
Sbjct: 256 RFAEAHREVATAAGEMPALRGFPSSTAHLIMSLCERAGPGAESMGDITALLTVLVAGSDM 315

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           ++PIAD +R +LDGH++L+R +AE GRYP +D L SVSR   +A S +E  L++    L+
Sbjct: 316 DEPIADILRGVLDGHVILDRQIAERGRYPAIDLLRSVSRSLPRAASDEENALIARARALL 375

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             +  +  +   G Y  G D  LD+A+   P +  FL
Sbjct: 376 SSYSRSETMIRAGLYAEGSDPELDQAIRIWPDLDGFL 412


>gi|149203131|ref|ZP_01880102.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. TM1035]
 gi|149143677|gb|EDM31713.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. TM1035]
          Length = 444

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 159/412 (38%), Positives = 246/412 (59%), Gaps = 4/412 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G +S++      ++ LS    LGD V  + ++   L G+VIR+    V + P    E ++
Sbjct: 18  GRVSAVQGNTLRISGLSSEARLGDRVDIRRRSGAPLSGEVIRLEAASVMVLPESSPEGVA 77

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           LGD V       I+PS  W GR+I+  G P+DG   L +G  +  + ++ P    R+ + 
Sbjct: 78  LGDRVILGQAEAIAPSHGWLGRIIDPFGAPLDGRPLL-RGAETRALRAEPPAPARRRALG 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
              +TG+   +   P+  GQR+G+FAGSG+GK+ LL   AR    D V+I+L+GERGRE+
Sbjct: 137 ARLETGMAAFNTVLPIVRGQRVGLFAGSGVGKTMLLGHLARHMQADVVVIALIGERGREL 196

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+E  LG + ++++V+V ATSD SP++R+    TA+ +AE+F  +G  VL + DSITR
Sbjct: 197 REFVEHVLGPEGMRRAVIVAATSDRSPLVRRRCAWTAMAVAEFFRDQGQQVLFLADSITR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+AT +GE+P  RG+P S    +  L ER GP E   G+ITA+++VLV G +  
Sbjct: 257 FAEAHREVATAAGEMPALRGFPASTSHLIMSLCERAGPGEDGAGDITALLTVLVAGSDME 316

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD +R +LDGH+VL+R +AE GRYP +D L SVSR   +A + +E  L+S    L+ 
Sbjct: 317 EPIADILRGVLDGHVVLDRQIAERGRYPAIDLLRSVSRSLPRAATDEENTLISRTRSLLG 376

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            +  +  +   G Y  G D  LD+A+   P +  FL +  + +S+++ F  +
Sbjct: 377 NYARSETMIKAGLYAEGSDPELDQAIRIWPELDGFLAEKEA-VSAKNSFARL 427


>gi|217077671|ref|YP_002335389.1| flagellar protein export ATPase FliI [Thermosipho africanus TCF52B]
 gi|217037526|gb|ACJ76048.1| flagellar protein export ATPase FliI [Thermosipho africanus TCF52B]
          Length = 434

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 165/377 (43%), Positives = 238/377 (63%), Gaps = 7/377 (1%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            L +V+  N + + + P+     +  G  V   G +   P S    G+VI++LG+P+DG 
Sbjct: 53  TLAEVVGFNDNGIILMPLEDISGLKKGCQVLKTGEYVSVPVSEELLGKVIDSLGRPLDGK 112

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
               K    + I+ + P  + R+R+      G+R ID F  L +GQRIG+FAGSG+GKST
Sbjct: 113 KIYTKE--KVPIVREAPNPLVRKRITTPISVGVRAIDGFLTLGYGQRIGIFAGSGVGKST 170

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAP 235
           LL M AR+   D  +ISL+GERGREVREFIE D   + LK+SVVVV+TSD+  +LR  A 
Sbjct: 171 LLGMVARNTSADINVISLIGERGREVREFIEKDLKKEGLKRSVVVVSTSDQPALLRVKAL 230

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LTA +IAEYF  KG NVLL++DS+TR+A + RE+   +GE P  RGYP SVF+ LP++LE
Sbjct: 231 LTATSIAEYFRDKGYNVLLMVDSLTRWAIAQREVGLATGEPPTTRGYPPSVFAGLPKILE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG+IT + +VLV+ D+ N+PI+D+VR I+DGHI+L+R LAE   YP +D L 
Sbjct: 291 RAGNS--DKGSITGIYTVLVESDDFNEPISDTVRGIVDGHIILSRKLAESAHYPAIDILM 348

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSRL +     + K     +  L+  + + +D+  +G Y+ G +  +DKA+  +  I  
Sbjct: 349 SVSRLMNDITRKEHKIAALKIKDLLATYYDAKDLIDVGAYKKGTNPKIDKAIELIDEINK 408

Query: 416 FLKQSPSD-LSSEDVFQ 431
           FL+QS  + +S ED  +
Sbjct: 409 FLRQSVDEKMSFEDTVE 425


>gi|258592502|emb|CBE68811.1| flagellum-specific ATP synthase [NC10 bacterium 'Dutch sediment']
          Length = 479

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 172/411 (41%), Positives = 240/411 (58%), Gaps = 7/411 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           NL+   G ++ +  V   +  + Q   +G+   +      D   +V+  + +I+ + P+G
Sbjct: 19  NLIRSLGKVTKV--VGLVIEAVGQEAFIGELCRIRSAGRHDVWAEVVGFHGEILLLMPLG 76

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               I  G  V   GR F +       GRV+N LG+PIDG   + + +    +  + P  
Sbjct: 77  EIHGIRPGSEVVAAGRPFEVPVGRSMLGRVVNGLGRPIDGKAPV-EVEARCSVHRQPPSP 135

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M R  + +   TGIRVID       GQR+G+FAGSG+GKSTLL M AR    D  +I+LV
Sbjct: 136 MTRAPIIEPLATGIRVIDGLLTCGKGQRVGIFAGSGVGKSTLLGMIARYTEADVNVIALV 195

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFI   LG D L++SVVVVATS+E  +LR+ A   A  IAEYF  +G +VLL
Sbjct: 196 GERGREVREFITKELGEDGLRRSVVVVATSNEPSLLRRQAAYVATAIAEYFRDQGKHVLL 255

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + REI  + GE P  RGYP S F+ LP LLER G ++   G+IT + ++L
Sbjct: 256 MMDSLTRFALAQREIGLSVGEPPTTRGYPPSAFAMLPGLLERAGTAD-HGGSITGLYTIL 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ N+P+AD  R+ILDGHIVL R LAE   YPPVD L SVSRL       + +   S
Sbjct: 315 VEGDDMNEPVADHARAILDGHIVLTRELAERNHYPPVDFLGSVSRLMSVVAPREVRAAAS 374

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
            L  L+    + +D+  IG Y  G +  +D+A+  +  I  FL+QS  + S
Sbjct: 375 KLRELLAAHRQAQDLINIGAYVSGSNPKVDEALRYMTPIEAFLRQSSDERS 425


>gi|146296283|ref|YP_001180054.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409859|gb|ABP66863.1| type III secretion system ATPase, FliI/YscN [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 431

 Score =  289 bits (740), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 162/411 (39%), Positives = 250/411 (60%), Gaps = 17/411 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP- 74
           S N     G+++ +  +  T+  +   V +G     +   S+ L +V+    + V + P 
Sbjct: 11  STNFYQFTGFVNQVIGL--TIESIGPAVSIGTLCKIKTAKSETLAEVVGFKENKVLLMPY 68

Query: 75  ---VGI--GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
              VGI  G ++   D +F      +       GR+++ LG+PIDG   + K  +   + 
Sbjct: 69  SDLVGIFPGCKVIAQDSIFE-----VKVGEELLGRILDGLGQPIDGKGEI-KSKIKYPVE 122

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D 
Sbjct: 123 NRAPNPLERPRIDSVMPLGIKAIDALITIGKGQRVGIFAGSGVGKSTLLGMIARNAKADV 182

Query: 190 VIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +++L+GERGRE++EF+E D   + LK+SVV+VATSDES + R  A   A+ IAEYF  +
Sbjct: 183 NVLALIGERGRELKEFLEKDLKEEGLKRSVVIVATSDESALKRVKAAYVAMAIAEYFRDQ 242

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G  + +KG+IT
Sbjct: 243 GMDVLFMMDSLTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSIT 300

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+ +VLVDGD+ N+PI D+ R ILDGHIVL+RS+A +  YP +D LAS+SR+ +   S +
Sbjct: 301 ALYTVLVDGDDFNEPITDTARGILDGHIVLSRSIANKNHYPAIDVLASISRVMNDIVSPE 360

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            K++ +    ++  ++E  D+  IG Y  G +  +D+A+  +P I +FL+Q
Sbjct: 361 HKEVANETKRILATYKEAEDLITIGAYTKGTNSEIDRAIDLMPRINEFLRQ 411


>gi|119384841|ref|YP_915897.1| FliI/YscN family ATPase [Paracoccus denitrificans PD1222]
 gi|119374608|gb|ABL70201.1| ATPase, FliI/YscN family [Paracoccus denitrificans PD1222]
          Length = 444

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 167/405 (41%), Positives = 243/405 (60%), Gaps = 9/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G +S+I +       L+ +  LGD VV   ++   L G+++ ++ D   I P G  + +S
Sbjct: 18  GQVSAIQAGVILAGGLNSHASLGDRVVFSMRSGQVLNGEIVALHSDQAVILPEGPMDGLS 77

Query: 83  LG---DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    +LVF      ++P+  W GR+I+  G+P+DG   +  G+         PPA +R 
Sbjct: 78  ISTRVELVFAP---MLAPANAWIGRIIDPFGRPLDGRPLVAGGE-ERGFRPPPPPAASRN 133

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+     TG+ V D   PL  GQR+G+FAGSG+GKSTLLSM A+    D V+I+LVGERG
Sbjct: 134 RLGGRLDTGLAVFDTLLPLVRGQRMGLFAGSGVGKSTLLSMLAKGVPADVVVIALVGERG 193

Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE+REF+E+ LG+  + +SVVV ATSD+ P++R+     A+T+AE+F  +G +VL + DS
Sbjct: 194 RELREFVEETLGEEGMARSVVVAATSDQPPLMRRRCAWAAMTVAEHFRDQGRHVLFLADS 253

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA + REIA  +GE P  RG+P S    +  L ER GP     G+ITA+ SVLV G 
Sbjct: 254 ITRFAEAHREIALAAGESPSYRGFPPSTSHLIMSLAERSGPGPAGAGDITAIFSVLVAGS 313

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +P+AD +R +LDGH+VL+R++AE GR+P VD L SVSR   +A SADE  L++    
Sbjct: 314 DMEEPVADILRGVLDGHVVLDRAIAERGRFPAVDVLRSVSRSLPQAASADENALIARARA 373

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            +  + E+  +   G Y PG D  LD+AV   P +  F  +   D
Sbjct: 374 TLGTYAESELMIRAGLYAPGSDPALDEAVRLYPALDAFFTRRGGD 418


>gi|24251287|gb|AAN46406.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
          Length = 442

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 160/367 (43%), Positives = 223/367 (60%), Gaps = 5/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P  A   GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +D  +    L  L+ ++ E   +  +G YR G D + D+A++++  I DFL 
Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAINRIDAIRDFLS 419

Query: 419 QSPSDLS 425
           Q    LS
Sbjct: 420 QPTDQLS 426


>gi|260431754|ref|ZP_05785725.1| flagellum-specific ATP synthase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415582|gb|EEX08841.1| flagellum-specific ATP synthase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 445

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 154/391 (39%), Positives = 240/391 (61%), Gaps = 3/391 (0%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V Q G +S +      +  L+    +GD   + + +  D  G+V+ +  D+V++ P    
Sbjct: 19  VRQMGVVSGVARGMIEIDGLATVARIGDHLTLRRPQGPDLAGEVLNVESDVVHMLPSAAP 78

Query: 79  EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           + + LGD V+       +P   W GRV++  G P+DG   L  G    ++++  P A++R
Sbjct: 79  DGVRLGDRVYLEPTPAFAPGMHWLGRVVDPFGTPLDGKPLL-PGMHERDVLAAPPRAVDR 137

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           + + +   TG+ +++   P+  GQR+G+FAGSG+GKSTLL+  A+S   D V+++L+GER
Sbjct: 138 KPLGERMATGLAIMNTVLPIVRGQRVGLFAGSGVGKSTLLATLAKSMEADAVVVALIGER 197

Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREV EF+E+ LG + LK+S+VV ATSD+S + R+    +A+T AEY   +G +VL + D
Sbjct: 198 GREVNEFVENALGREGLKRSIVVAATSDQSALARRRCAWSAMTAAEYLRDQGLSVLFLAD 257

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + REIA   GE P  RG+P SV   +  L ER GP  + +G+ITAV SVLV G
Sbjct: 258 SVTRFAEAHREIAVAMGESPSLRGFPPSVTPMIAGLCERAGPGTENQGDITAVFSVLVAG 317

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + ++PIAD +R +LDGHIVL+R +AE GR+P +D   SVSR    A + +E +L++   
Sbjct: 318 SDMDEPIADILRGVLDGHIVLSREIAERGRFPAIDVSRSVSRSLPDAATPEENQLIAETR 377

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
            L+  +E++  +   G Y PG D +LD+A+ 
Sbjct: 378 RLVGSYEQSEVMIKAGLYTPGTDPLLDQAMR 408


>gi|323705443|ref|ZP_08117018.1| ATPase, FliI/YscN family [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535345|gb|EGB25121.1| ATPase, FliI/YscN family [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 438

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 171/410 (41%), Positives = 253/410 (61%), Gaps = 8/410 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPV 75
           KN +   G +S +  V  T+  +     +GD    +  N   +  +V+    D VY+ P+
Sbjct: 17  KNFIKYYGKVSQV--VGLTIESVGPISNIGDVCEIRSINGTTVYAEVMGFKDDKVYLMPL 74

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + I  G+ V   G + +I       GRVI+ALG PIDG  ++    L +   +  P 
Sbjct: 75  GDMDGIGPGNSVVSTGQKLKIGVGKELLGRVIDALGNPIDGKGAIKCKKL-VSTNNTPPN 133

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  +I+L
Sbjct: 134 PIERKRISEVMTLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMIARNAKSDINVIAL 193

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREV EFIE  LG D LK+S++VV+TSD   ++R    + A +IAEYF  +G +VL
Sbjct: 194 IGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMAATSIAEYFRDQGLDVL 253

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + REI  + GE PV+RGY  SVFS LP+LLER G S+   G+ITA+ +V
Sbjct: 254 LMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSSKH--GSITALYTV 311

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LVDGD+ N+PI D+VR ILDGHIVL+R LA +G+YP +D L+S+SR+ +   + + K L 
Sbjct: 312 LVDGDDLNEPITDAVRGILDGHIVLSRKLANKGQYPAIDVLSSISRVMNDIVTDEHKNLS 371

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +++  +EE+ D+  IG Y  G +  +D+A+     + +++KQS ++
Sbjct: 372 LRFKNILSVYEESEDLINIGAYAKGSNPKIDEAILLHDDMINYIKQSTNE 421


>gi|315654581|ref|ZP_07907487.1| flagellar protein export ATPase FliI [Mobiluncus curtisii ATCC
           51333]
 gi|315657514|ref|ZP_07910396.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491045|gb|EFU80664.1| flagellar protein export ATPase FliI [Mobiluncus curtisii ATCC
           51333]
 gi|315491986|gb|EFU81595.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 444

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 167/398 (41%), Positives = 235/398 (59%), Gaps = 8/398 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+  +   V  L    C    VV  G +     +V+ ++  I    P+   + + +
Sbjct: 25  GEVESVVGLSVRVRGLQ---CSVGEVVLVGDDPGVPAEVVALDAGIASCMPLDNLDGLRV 81

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G     P      GRVI+A G+P+DG   +   D  + I    P A+ R R++
Sbjct: 82  GSPVRGTGLPATVPVGPALLGRVIDAAGRPLDGKGPIYAAD-RVPIHGAAPNALERARID 140

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
                G+RV+D    L  GQRIG+FAGSG+GKSTL+SM AR    +  +I+LVGERGREV
Sbjct: 141 MPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIARGTNAEVCVIALVGERGREV 200

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+ED LG+  L +SVVVVATSDESP+LRK A  TA  +AEY+   G +VLL++DS+TR
Sbjct: 201 REFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRVAEYYRDAGRHVLLMMDSLTR 260

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
              + REI  + GE P  RGYP S FS + +LLER G      G++T + +VLVDGD+HN
Sbjct: 261 TCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAG--SGAIGSVTGIYTVLVDGDDHN 318

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD  RSILDGH+VL+R LA  G YP +D L S+SR+A K  + ++++  ++L  ++ 
Sbjct: 319 EPIADQARSILDGHVVLDRKLAVAGHYPAIDALGSISRVASKVTTREQREAATALRQIMG 378

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                +D+  +G Y+ G +  +D AV     I  FL Q
Sbjct: 379 AKRSVQDLLDVGAYQAGTNPEVDTAVKYDAEIEAFLTQ 416


>gi|58579714|ref|YP_198730.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84621742|ref|YP_449114.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|188574355|ref|YP_001911284.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|7350913|gb|AAF61281.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
 gi|9711583|dbj|BAB07852.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
 gi|50428346|dbj|BAD29983.1| HrcN [Xanthomonas oryzae pv. oryzae]
 gi|58424308|gb|AAW73345.1| HrcN protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365682|dbj|BAE66840.1| HrcN protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188518807|gb|ACD56752.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 442

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 160/367 (43%), Positives = 223/367 (60%), Gaps = 5/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P  A   GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +D  +    L  L+ ++ E   +  +G YR G D + D+A++++  I DFL 
Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAINRIDAIRDFLS 419

Query: 419 QSPSDLS 425
           Q    LS
Sbjct: 420 QPTDQLS 426


>gi|327441052|dbj|BAK17417.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Solibacillus silvestris StLB046]
          Length = 441

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 166/374 (44%), Positives = 234/374 (62%), Gaps = 9/374 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115
           L +V+    +IV + P    +EIS+G LV   G     ++ P     G+V++A+G P DG
Sbjct: 58  LAEVVGFKDEIVILMPYSSLKEISIGCLVEGTGSPLEVKVGPE--LIGKVLDAMGNPFDG 115

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L KG +++    + P  ++R  + +  + G++ ID    +  GQR+G+FAGSG+GKS
Sbjct: 116 Q-PLPKGLMTVPTEKEPPNPLSRPPINEQLEVGVKAIDGMLTVGSGQRVGIFAGSGVGKS 174

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL M AR+   D  +I+LVGERGREVREFIE  LG + L++SVVV ATSD+  ++R  A
Sbjct: 175 TLLGMIARNTEADINVIALVGERGREVREFIERDLGPEGLQRSVVVAATSDQPALMRIKA 234

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA  IAEYF  +G NV+L++DS+TR A + REI    GE P  RGY  SVF+ LP LL
Sbjct: 235 AFTATAIAEYFRDRGKNVMLMMDSVTRVAMAQREIGLAIGEPPATRGYTPSVFAILPTLL 294

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +    G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L
Sbjct: 295 ERSGTNIN--GTITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRNLANKGQYPAINIL 352

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSRL +     +  +  S L  L + + ++ D+  IG Y+ G    +D+A+   P+I 
Sbjct: 353 KSVSRLMNHIAQPEHVRAASRLRELYYSYSKSEDLINIGAYKRGTSKEIDEAIMYEPLIT 412

Query: 415 DFLKQSPSDLSSED 428
           +FLKQ   D  S D
Sbjct: 413 EFLKQGYKDKISID 426


>gi|313901517|ref|ZP_07834964.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468212|gb|EFR63679.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           subterraneus DSM 13965]
          Length = 476

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 155/372 (41%), Positives = 228/372 (61%), Gaps = 15/372 (4%)

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM- 129
           + P+G    I  G  V   G+ FR++      GRV++ LG+P+DG     +G ++ E   
Sbjct: 102 LMPLGDARAIRPGSRVEATGQGFRVAVGEGLLGRVLDGLGRPLDG-----QGPVAAEAWY 156

Query: 130 ---SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
              +  PP + R+ + +    G+R ID       GQR+G+FAGSG+GKSTLL+M  R   
Sbjct: 157 PAEADPPPPLARRPIREPLPVGVRAIDALLTCGRGQRVGIFAGSGVGKSTLLAMMTRHTA 216

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            D V+++L+GER REVR+F++ +L  + +++VVV AT+D   ++R  A   A  IAE+F 
Sbjct: 217 ADVVVVALIGERNREVRDFVDHHLAGSRRRTVVVAATADRPALVRIKAAQVATAIAEFFR 276

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL++DS+TR+A ++RE+    GE P  RGYP SVF+ LPRLLER G    ++G+
Sbjct: 277 DRGRHVLLVMDSVTRYAMALREVGLAVGEPPATRGYPPSVFAALPRLLERAG--TGDRGS 334

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT   +VLVDGD+ N+P+AD+VR  LDGHIVL+R LAEEG++P VD LASVSRL  +   
Sbjct: 335 ITGFYTVLVDGDDFNEPVADAVRGTLDGHIVLSRQLAEEGQFPAVDVLASVSRLMPELVD 394

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           A        L   +  + E RD+  IG Y+ G +  +D+A+ ++P I  FL Q   + +S
Sbjct: 395 AAHWAAAQRLRRWLGAYREARDLVEIGAYQRGTNPDVDRALERMPAIRAFLSQGRDEAAS 454

Query: 427 EDVFQEITKKLQ 438
              F E   +LQ
Sbjct: 455 ---FSEAVARLQ 463


>gi|298345993|ref|YP_003718680.1| H(+)-transporting two-sector ATPase [Mobiluncus curtisii ATCC
           43063]
 gi|304390249|ref|ZP_07372203.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|298236054|gb|ADI67186.1| H(+)-transporting two-sector ATPase [Mobiluncus curtisii ATCC
           43063]
 gi|304326731|gb|EFL93975.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 444

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 167/398 (41%), Positives = 235/398 (59%), Gaps = 8/398 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+  +   V  L    C    VV  G +     +V+ ++  I    P+   + + +
Sbjct: 25  GEVESVVGLSVRVRGLQ---CSVGEVVLVGDDPGVPAEVVALDAGIASCMPLDNLDGLRV 81

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G     P      GRVI+A G+P+DG   +   D  + I    P A+ R R++
Sbjct: 82  GSPVRGTGLPATVPVGPALLGRVIDAAGRPLDGKGPIYAAD-RVPIHGAAPNALERARID 140

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
                G+RV+D    L  GQRIG+FAGSG+GKSTL+SM AR    +  +I+LVGERGREV
Sbjct: 141 MPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIARGTNAEVCVIALVGERGREV 200

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+ED LG+  L +SVVVVATSDESP+LRK A  TA  +AEY+   G +VLL++DS+TR
Sbjct: 201 REFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRVAEYYRDAGRHVLLMMDSLTR 260

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
              + REI  + GE P  RGYP S FS + +LLER G      G++T + +VLVDGD+HN
Sbjct: 261 TCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAG--SGAIGSVTGIYTVLVDGDDHN 318

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD  RSILDGH+VL+R LA  G YP +D L S+SR+A K  + ++++  ++L  ++ 
Sbjct: 319 EPIADQARSILDGHVVLDRKLAVAGHYPAIDALGSISRVASKVTTREQREAATALRQIMG 378

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                +D+  +G Y+ G +  +D AV     I  FL Q
Sbjct: 379 AKRSVQDLLDVGAYQAGTNPEVDTAVKYDAEIEAFLTQ 416


>gi|42526727|ref|NP_971825.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC
           35405]
 gi|41817042|gb|AAS11736.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC
           35405]
          Length = 474

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 168/384 (43%), Positives = 233/384 (60%), Gaps = 7/384 (1%)

Query: 55  NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           N D L  +V+ +N  IV +      + + +GDLV   G     P      GRV++AL K 
Sbjct: 52  NPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKS 111

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
            DG            +++  P AM R+ + +   TGIR ID    +  GQR+G+FAG+GI
Sbjct: 112 ADGKPEPYSAK-RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGI 170

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKSTLL M AR+   D  +I+L+GERGREV +FIE  LG + LK SV+V ATSD+S + R
Sbjct: 171 GKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALAR 230

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                TA  IAEYF  +G +V+L+ DS+TRFA + REI    GE P  RGY  SVFS LP
Sbjct: 231 IRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLP 290

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           +LLER G SEK  G+IT   +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V
Sbjct: 291 KLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAV 348

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           + L S+SRL+++    + K     +  L+  + E+ D+  +G Y+ G    +D A+   P
Sbjct: 349 NVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYP 408

Query: 412 IIYDFLKQSPSDLSS-EDVFQEIT 434
            IYDFL Q   D +  +D  Q+++
Sbjct: 409 RIYDFLTQEVDDPAKLKDTLQKLS 432


>gi|89098641|ref|ZP_01171523.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911]
 gi|89086603|gb|EAR65722.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911]
          Length = 438

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 168/399 (42%), Positives = 239/399 (59%), Gaps = 8/399 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACW 101
           VC+    V  GK    + +V+    + V + P     EI+ G LV    +   I      
Sbjct: 42  VCI--IHVGSGKKRKIMAEVVGFKEENVILMPYTAISEIAPGSLVEATLKPLEIKIGTSL 99

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G VI+ALG P+DG  +L KG  S+      P  MNR  +    + G+R ID    + +G
Sbjct: 100 IGEVIDALGHPLDGK-ALPKGLASVPTEQDPPNPMNRPPISAPVEVGVRAIDSLLTVGYG 158

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           QR+G+FAGSG+GKSTLL M AR+   D  +I+L+GERGREVREFIE+ LG+  LK+S+V+
Sbjct: 159 QRVGIFAGSGVGKSTLLGMVARNTKADLNVIALIGERGREVREFIENDLGEEGLKRSIVI 218

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            ATSD+  ++R     TA  IAEYF  KG NV+L++DS+TR A + RE+    GE P  +
Sbjct: 219 AATSDQPALMRIKGAYTATAIAEYFRDKGLNVVLMMDSVTRVAMAQREVGLAIGEPPTTK 278

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  SVF+ LP+LLER G + K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGH VL+R
Sbjct: 279 GYTPSVFAVLPKLLERTGTNHK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHFVLDR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LA +G+YP ++ L SVSR+ +     + KK    L   +  +  + D+  IG Y+ G  
Sbjct: 337 ALANKGQYPAINVLKSVSRVMNNIVPHEHKKSAELLRERLSTYINSEDLINIGAYKKGTS 396

Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
             +D+AV   P I  FLKQ   + ++ +D  Q + + ++
Sbjct: 397 REIDQAVRLYPEIISFLKQGTEEKVTMQDSIQHLLRLME 435


>gi|325473789|gb|EGC76977.1| flagellum-specific ATP synthase FliI [Treponema denticola F0402]
          Length = 474

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 168/384 (43%), Positives = 233/384 (60%), Gaps = 7/384 (1%)

Query: 55  NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           N D L  +V+ +N  IV +      + + +GDLV   G     P      GRV++AL K 
Sbjct: 52  NPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNVLLGRVVDALCKS 111

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
            DG            +++  P AM R+ + +   TGIR ID    +  GQR+G+FAG+GI
Sbjct: 112 ADGKPEPYSAK-RYPVVAPPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGI 170

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKSTLL M AR+   D  +I+L+GERGREV +FIE  LG + LK SV+V ATSD+S + R
Sbjct: 171 GKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALAR 230

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                TA  IAEYF  +G +V+L+ DS+TRFA + REI    GE P  RGY  SVFS LP
Sbjct: 231 IRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLP 290

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           +LLER G SEK  G+IT   +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V
Sbjct: 291 KLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAV 348

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           + L S+SRL+++    + K     +  L+  + E+ D+  +G Y+ G    +D A+   P
Sbjct: 349 NVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYP 408

Query: 412 IIYDFLKQSPSDLSS-EDVFQEIT 434
            IYDFL Q   D +  +D  Q+++
Sbjct: 409 RIYDFLTQEVDDPAKLKDTLQKLS 432


>gi|30524894|gb|AAP34339.1|AF499777_7 HrcN [Xanthomonas axonopodis pv. glycines]
          Length = 442

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 159/368 (43%), Positives = 223/368 (60%), Gaps = 5/368 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419

Query: 419 QSPSDLSS 426
           Q    LS+
Sbjct: 420 QPTDQLSA 427


>gi|323530315|ref|YP_004232467.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1001]
 gi|323387317|gb|ADX59407.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1001]
          Length = 470

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 165/418 (39%), Positives = 242/418 (57%), Gaps = 9/418 (2%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIV 70
           E  S   + + G +  +      V  L   V LG+    +  N   L   +VI    D+ 
Sbjct: 44  EILSTATIARSGKVLEVIGTLVKVAGLD--VTLGELCELRAANGKLLQHAEVIGFTRDVA 101

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            + P     +IS    V   GR    P      GRVI++LG+PIDG   LG  +    + 
Sbjct: 102 LLSPFSRLADISRSTRVVGLGRSLTVPVGDSLLGRVIDSLGEPIDGLGPLGATE-QRPVF 160

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           +  P  M R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D 
Sbjct: 161 ANPPSPMTRRMIDTPLATGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLLGMFARGAQCDV 220

Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +I+L+GERGREVREF+E  LG + + +SVVV ATSD S I R  A   A  IAE+F  +
Sbjct: 221 TVIALIGERGREVREFVELILGAEGMARSVVVCATSDRSSIERAKAAYVATAIAEHFRDR 280

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G  VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G    E G+IT
Sbjct: 281 GQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGMG--EHGSIT 338

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+ +VL + ++ NDPIA+ VR I+DGH++L+R +A + +YP +D LAS+SR+  +  + D
Sbjct: 339 AMYTVLAEDESGNDPIAEEVRGIVDGHMILSREIAAKNQYPAIDVLASLSRVMPQVMTPD 398

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +  + L  L+ +  E   +  IG Y+PG + + D+A+ ++  I  F  Q+  +L++
Sbjct: 399 YVRAAARLRELLAKHREVEMLLQIGEYQPGGNPLADEAIRKIDAIRAFFNQATHELAA 456


>gi|323490145|ref|ZP_08095365.1| flagellum-specific ATP synthase [Planococcus donghaensis MPA1U2]
 gi|323396193|gb|EGA89019.1| flagellum-specific ATP synthase [Planococcus donghaensis MPA1U2]
          Length = 438

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 160/364 (43%), Positives = 234/364 (64%), Gaps = 11/364 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDGDD 117
           +V+    + + + P+    ++  G LV   G   + ++ PS    G+V++  G P+D  +
Sbjct: 59  EVVGFKENRIMLMPLQDLSQVGPGCLVVATGGPLQIKVGPS--ILGKVLDGTGMPLD--E 114

Query: 118 SLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           SL    L     +  PP  + R R++K  + G+R ID    +  GQRIGVFAGSG+GKST
Sbjct: 115 SLLPRGLKKYSTNNAPPNPLKRPRIDKPLEVGVRAIDGLLTVGQGQRIGVFAGSGVGKST 174

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           L+ M AR+   D  +I+LVGERGREVR+FIE  LG + LKKSVVV ATSD++P+ R  A 
Sbjct: 175 LMGMIARNTEADINVIALVGERGREVRDFIERDLGPEGLKKSVVVAATSDQTPMQRIKAA 234

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LTA  IAEYF  +G NV+L++DS+TRFA + RE+    GE P ++GY  SVF+ LP+LLE
Sbjct: 235 LTATAIAEYFRDQGKNVMLMMDSVTRFAMAQREVGLAVGEPPTSKGYTPSVFALLPKLLE 294

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R +A++G++P ++ +A
Sbjct: 295 RSGTSSK--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRKIAQKGQFPAINVMA 352

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  +  S + +        L+  +E + D+  IG Y+ G +  +D A+   P+I +
Sbjct: 353 SVSRVMHEVVSEEHQLAARDFKRLLAAYETSEDLINIGAYKSGANKEIDDAIRAYPVIKE 412

Query: 416 FLKQ 419
           +L+Q
Sbjct: 413 YLQQ 416


>gi|313905130|ref|ZP_07838499.1| flagellar protein export ATPase FliI [Eubacterium cellulosolvens 6]
 gi|313470033|gb|EFR65366.1| flagellar protein export ATPase FliI [Eubacterium cellulosolvens 6]
          Length = 434

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 155/345 (44%), Positives = 226/345 (65%), Gaps = 4/345 (1%)

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I+ G  V + G R RI       GR+INA+G+PIDG ++         + S     ++R 
Sbjct: 76  ITSGSFVRNTGHRLRIPVGEFLKGRIINAIGEPIDGKEAFPCNCDFYTVNSGYSNPLSRP 135

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +      G++ ID    +  GQRIG+FAGSG+GKSTLL M A++   D  +I+LVGERG
Sbjct: 136 PIRNRLNMGVKAIDGLNTIGKGQRIGIFAGSGVGKSTLLGMIAKNVTSDLNVIALVGERG 195

Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV EF+E  LG + +K++V+VVATSD+  ++R  APL A TIAEYF  +G +VLL++DS
Sbjct: 196 REVLEFVERDLGPEGMKRTVLVVATSDQPSMMRLKAPLVATTIAEYFRDQGMDVLLMMDS 255

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P+ARGY  S++SE P+LLER G  + +KG+IT + +VLV+GD
Sbjct: 256 LTRFAMAQREIGLATGEPPIARGYTPSIYSEFPKLLERAG--QFKKGSITGIYTVLVEGD 313

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PIAD+VR ILDGHIVL+R+LA +  YP +D  AS+SRL  +  S + +K+ S + +
Sbjct: 314 DTNEPIADTVRGILDGHIVLSRALAAQNHYPAIDIGASISRLMVELVSPEHRKMASRMRN 373

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           ++  +++  D+  IG Y+ G +  LD+AV +   I  FL Q   +
Sbjct: 374 ILGIYQKNADLIAIGAYKKGKNPALDEAVEKYGAINRFLMQGTQE 418


>gi|325917021|ref|ZP_08179260.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325536772|gb|EGD08529.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 442

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/370 (42%), Positives = 225/370 (60%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  +  +  + P G    +S    V   GR    P  +   GRV++ LG+P DG   +
Sbjct: 63  EVVGFSRTLALLAPFGELVGLSRETRVIGSGRPLAVPVGSALLGRVLDGLGEPADGQGPV 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  ++I ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 DCEEW-VQIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGEDGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D L S+S
Sbjct: 302 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  SA++++    L  L+ +  E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVSAEQRQYAGQLRRLLAKHNEVETLLQVGEYRQGSDAVADEAIARIDAIRDFLS 419

Query: 419 QSPSDLSSED 428
           QS   LS  D
Sbjct: 420 QSTDQLSDYD 429


>gi|309388820|gb|ADO76700.1| type III secretion system ATPase, FliI/YscN [Halanaerobium
           praevalens DSM 2228]
          Length = 435

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/404 (39%), Positives = 247/404 (61%), Gaps = 8/404 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           N+    G+I+ +  +   +  +     +G+  + +G+N D   +V+  + + V + P+G 
Sbjct: 17  NMTRNFGHINRV--IGLVIESIGPQASIGELCLIKGENGDIKAEVVGFDDNKVLMMPIGE 74

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E I  G  V     + ++       G++I+  G  I G+D  G  ++   + +K P  +
Sbjct: 75  MEGIRPGARVIATDEKLKVKVGKELLGKIIDGSGNIISGEDPSGLNEVP--VNNKPPDPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R++     G+R ID F     GQR+G+FAGSG+GKSTLL M AR+   D  +I LVG
Sbjct: 133 TRARIKAPLSLGVRCIDGFLTCGKGQRMGIFAGSGVGKSTLLGMAARNTNADINVIGLVG 192

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVR+FIE  LG + L++S+VVVATSD+  +LR  A   A  IAEYF  +G++VLL+
Sbjct: 193 ERGREVRDFIEKDLGAEGLERSIVVVATSDQPALLRVKAANIATAIAEYFRDQGEDVLLM 252

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR A ++RE+    GE P  RGYP SVF+ELP+LLER G +  + G+ITA+ +VLV
Sbjct: 253 MDSVTRVAMALREVGLAIGEPPATRGYPPSVFAELPKLLERTGTN--DVGSITALYTVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+P++D+VR ILDGHI L+R LAE   YP VD L+SVSR+ +   S +  +  + 
Sbjct: 311 EGDDFNEPVSDTVRGILDGHISLSRELAESSHYPAVDVLSSVSRIMEDIVSKEHSQAAAK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L  +I  + ++ D+  IG Y  G +  +D+A+ ++  I +FL Q
Sbjct: 371 LQKIIATYNQSEDLINIGAYEKGSNPEVDRAIAKIDEINNFLTQ 414


>gi|157163914|ref|YP_001465995.1| flagellum-specific ATP synthase [Campylobacter concisus 13826]
 gi|112801755|gb|EAT99099.1| flagellar protein export ATPase FliI [Campylobacter concisus 13826]
          Length = 435

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 166/418 (39%), Positives = 242/418 (57%), Gaps = 7/418 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G I+ IT+    +T L     +GD V  V + K+ + LG V +I  D  YI P G  E  
Sbjct: 21  GVITKITATTIEITGLRP--SIGDIVRIVAKDKSKNGLGMVTQIKTDGAYISPFGFVEGF 78

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +GD V+   +   I       GRV++   KPIDG  ++   +  M IM     AM R  
Sbjct: 79  RIGDFVYESDQGMSIPVGPNLLGRVVDPFMKPIDGKGAIDTTEY-MPIMRAPIDAMKRGL 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + + F  GI+ ID       GQ++G+FAGSG+GKSTL+ M  ++      +++L+GERGR
Sbjct: 138 INEPFSVGIKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNTLAPIKVVALIGERGR 197

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EV EFIE  LG +L+ +V++VATSD+S ++RK     A+++AEYF  +G++VL I+DS+T
Sbjct: 198 EVPEFIEKNLGGDLEGTVIIVATSDDSSLMRKYGAFCAMSVAEYFKQQGNDVLFIMDSVT 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI    GE P ++GYP S  + LP+L+ER G  E+ KG+ITA  +VLV+GD+ 
Sbjct: 258 RFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGKGSITAFFTVLVEGDDM 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+       + K        L 
Sbjct: 317 SDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVMGDVIGKEHKLNAMKFKRLY 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
              +E   +  IG Y+ G D  LD A+ +   +  FLKQS  +  + +  +E+  K+ 
Sbjct: 377 SLLKENEVLLRIGAYQKGSDKELDLAISKKEFMESFLKQSSEESFALEEVEELLDKIN 434


>gi|89895732|ref|YP_519219.1| hypothetical protein DSY2986 [Desulfitobacterium hafniense Y51]
 gi|89335180|dbj|BAE84775.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 433

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/405 (40%), Positives = 242/405 (59%), Gaps = 9/405 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L+V  G ++ I  V   +      V +G++  +H  +  +   +V+        + P+ 
Sbjct: 15  DLIVSHGRVAKI--VGLMIESDGPRVSVGEYCRIHTQQGKEIPAEVVGFRNSTTLLMPLA 72

Query: 77  IGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E I+ GD +V    +  +       GR+++ LG+P+DG   +   D  ++  +  P A
Sbjct: 73  ELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPMVTHRDYPLQ--NAPPSA 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R R+      G+R +D    +  GQRIG+FAGSG+GKSTLL M AR+      +I+LV
Sbjct: 131 FLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAGVNVIALV 190

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+R+FIE  LG+  L++SV+VVATSD+  ++R  A  TA  IAEYF  +G +VLL
Sbjct: 191 GERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRDQGQDVLL 250

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + RE+   +GE P  RGYP SVF+ LP+LLER G SE   G+IT + +VL
Sbjct: 251 MMDSVTRFAMAQREVGLTTGEPPATRGYPPSVFAMLPKLLERSGMSEI--GSITGIYTVL 308

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+HN+PIAD+VR ILDGHIVL R LA +  YP +D L SVSR+ +   + + K+L  
Sbjct: 309 VDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAPEHKELAG 368

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            L   +  + + +D+  IG Y  G +  +D A+  +  I  FL+Q
Sbjct: 369 KLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQ 413


>gi|317121818|ref|YP_004101821.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           marianensis DSM 12885]
 gi|315591798|gb|ADU51094.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           marianensis DSM 12885]
          Length = 462

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/421 (38%), Positives = 240/421 (57%), Gaps = 18/421 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G++  +  V   V        LG+   +H+        +V+        + P+G    I 
Sbjct: 46  GWVEQV--VGLAVEARGPVSSLGELCWIHRAGLPPVPAEVVGFRGPHTLLMPLGDARAIR 103

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM----SKVPPAMN 137
            G LV   GR F +       GRV++ LG+P+DG     +G +++E       + PP + 
Sbjct: 104 PGSLVEATGRGFTVGVGEGLLGRVLDGLGRPLDG-----QGPVAVEAWYPAEGEPPPPLA 158

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           RQ + +    G+R ID       GQR+G+FAGSG+GKSTLL+M  R    D V+++L+GE
Sbjct: 159 RQPIREPLPVGVRSIDALLTCGRGQRVGIFAGSGVGKSTLLAMMTRHTAADVVVVALIGE 218

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           R REVR+F++ +L  + +++VVV AT+D   ++R  A   A  IAE+F  +G +VLL++D
Sbjct: 219 RNREVRDFVDHHLAGSRRRTVVVAATADRPALVRIKAAQVATAIAEFFRDRGRHVLLVMD 278

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A ++RE+    GE P  RGYP SVF+ LPRLLER G     +G+IT   +VLVDG
Sbjct: 279 SVTRYAMALREVGLAVGEPPATRGYPPSVFAALPRLLERAG--TGPRGSITGFYTVLVDG 336

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD+VR  LDGHIVL+R LAEEG++P VD LASVSRL  +            L 
Sbjct: 337 DDLNEPIADAVRGTLDGHIVLSRQLAEEGQFPAVDVLASVSRLMPELVEPAHWAAAQRLR 396

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +  + E RD+  IG Y+ G +  +D+A+ ++P I  FL Q   + S    F E   +L
Sbjct: 397 RWLGAYREARDLLEIGAYQRGSNPDVDRALERMPAIRAFLTQGRDEASP---FAEAVARL 453

Query: 438 Q 438
           Q
Sbjct: 454 Q 454


>gi|326796467|ref|YP_004314287.1| flagellar protein export ATPase FliI [Marinomonas mediterranea
           MMB-1]
 gi|326547231|gb|ADZ92451.1| flagellar protein export ATPase FliI [Marinomonas mediterranea
           MMB-1]
          Length = 449

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/415 (40%), Positives = 243/415 (58%), Gaps = 9/415 (2%)

Query: 32  VYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
           V  T+  +   V LGD   V  G +     +V+  N  + Y+ P    E I+ G  V   
Sbjct: 31  VGLTMEAVGCKVALGDRCNVQVGASKWVESEVVGFNGKLTYLMPTEAIEGIAPGARVVPL 90

Query: 91  GR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
               R+       GRVIN LG+P+DG   +   D S+ +  ++   + R+ +      GI
Sbjct: 91  DDDSRMPVGDHLLGRVINGLGRPLDGRGPI-TSDESISLQGEIINPLQRKPISDTLDVGI 149

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           + I+    +  GQR+G+FAGSG+GKS LL M  R    D  I+ L+GERGREV+EFIE  
Sbjct: 150 KTINSLLTVGKGQRLGLFAGSGVGKSMLLGMMTRFTEADITIVGLIGERGREVKEFIEQI 209

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG+  L KSVV+ + +D+S ++R  A +    IAEYF  +G NVLL++DS+TR+A + RE
Sbjct: 210 LGEEGLAKSVVIASPADDSALMRLRAAMLTTRIAEYFRDQGRNVLLLMDSLTRYAQAQRE 269

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA + GE P  +GYP SVFS+LP+L+ER G  ++  G+ITA  +VL +GD+  DPIAD+ 
Sbjct: 270 IALSVGEPPATKGYPPSVFSKLPQLVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADAS 329

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+R LAEEG YP +D  AS+SR      S++  +    +  L  +F++ RD
Sbjct: 330 RAILDGHIVLSRRLAEEGHYPAIDIEASISRAMPHIVSSEHLQGAMRVKQLYSKFQQNRD 389

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-----DLSSEDVFQEITKKLQ 438
           +  +G Y  G D  LD+A+  +P I DFL+QS S     + S E + Q +T   Q
Sbjct: 390 LISVGAYSKGSDPDLDQAIMLMPDINDFLRQSLSESFNLEQSLEKLVQALTSNQQ 444


>gi|159045786|ref|YP_001534580.1| flagellum-specific ATP synthase [Dinoroseobacter shibae DFL 12]
 gi|157913546|gb|ABV94979.1| flagellum-specific ATP synthase [Dinoroseobacter shibae DFL 12]
          Length = 450

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 165/440 (37%), Positives = 255/440 (57%), Gaps = 6/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M  +  +LA   E  S + +   G++S+++     VT L+++  LGD VV  G     +G
Sbjct: 1   MTPDFSSLAAQIEGASFHRI--SGHVSALSEAVVEVTGLNRHARLGDRVVLTGATGAEVG 58

Query: 61  -QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
            +V+ ++   + + P    E  +L D  +  GR  + PS  W G+VI+  G+  DG    
Sbjct: 59  GEVVTLSGSHIEVLPEARLEGFALRDRAYFQGRSEVRPSEDWIGKVIDPFGRCHDGTIP- 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G  +  +    P A+ R+ +    +TG  V + F PL  GQR+G+FAGSG+GKSTLL 
Sbjct: 118 APGPTAYPLRGTPPSAITRKPLGHRLETGTAVFNTFLPLVRGQRLGLFAGSGVGKSTLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
              RS   D  +++L+GERGREVREF++  LG D +K+++VV ATSD++P+L++ A   A
Sbjct: 178 KLTRSVQADIAVVALIGERGREVREFVDRTLGADGMKRAIVVAATSDQAPLLKRRAAWLA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           ++IAEYF   G +VL + DS+TRFA + RE+A  +GE P  RG+P S    +  L ER G
Sbjct: 238 MSIAEYFRDLGGHVLFLTDSVTRFAEAHREVALTAGEAPSMRGFPPSTGQMIMDLAERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + KG+IT + SVLV G + ++P+AD +R +LDGH+VL+R +AE GR+P VD L SVS
Sbjct: 298 PGPEGKGDITGIFSVLVAGSDMDEPVADILRGVLDGHVVLSREIAERGRFPAVDVLQSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A SA E +L+      +  +E +R +   G Y  G D  +D A+     +  FL 
Sbjct: 358 RSLPDAASAAENELLQLARRTMGIYERSRLMIQSGLYTQGSDAEIDAAITAHRELEGFLA 417

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           +  +  ++ D F+ + + L+
Sbjct: 418 RVETG-TAADSFEHLAQALR 436


>gi|21241185|ref|NP_640767.1| type III secretion system ATPase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21106492|gb|AAM35303.1| HrcN protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 442

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/368 (43%), Positives = 223/368 (60%), Gaps = 5/368 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419

Query: 419 QSPSDLSS 426
           Q    LS+
Sbjct: 420 QPTDRLSA 427


>gi|220913729|ref|YP_002489038.1| ATPase, FliI/YscN family [Arthrobacter chlorophenolicus A6]
 gi|219860607|gb|ACL40949.1| ATPase, FliI/YscN family [Arthrobacter chlorophenolicus A6]
          Length = 446

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/364 (45%), Positives = 227/364 (62%), Gaps = 6/364 (1%)

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    ++ GD     G+  + P+     GRV++ LG+PIDG   L  G   +   ++ 
Sbjct: 72  PLGRLTGVAAGDPARSKGKPLMVPTGTGLFGRVLDGLGRPIDGKGPLVTGR-HVPADNES 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P AM+R RVE    TG+RV+D    L  GQR+G+FAGSG+GKS+LLSM AR    +  +I
Sbjct: 131 PSAMHRARVEAPLHTGVRVLDTMATLGRGQRMGLFAGSGVGKSSLLSMVARGTDAEVSVI 190

Query: 193 SLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +LVGERGREVREF+ED LG + L +SVVVVATSDE  ++R    +TA  IAE F   G +
Sbjct: 191 ALVGERGREVREFLEDDLGAEGLARSVVVVATSDEPALMRLRCAVTATRIAESFREAGRD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L++DS+TR A + REI  ++GE P  RGYP S FS L RLLER G +  E G++T + 
Sbjct: 251 VVLMMDSLTRVAMAQREIGLSAGEPPATRGYPPSTFSLLARLLERAGTA--ETGSVTGIY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+HN+PIAD+ RSILDGH+VL+R LA  G +P VD L SVSR+A K  +     
Sbjct: 309 TVLVDGDDHNEPIADAARSILDGHVVLDRKLAVAGHFPSVDVLGSVSRVASKVNAPGNTA 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVF 430
           + + L   +      +D+  +G Y  G + ++D A+     I  FL+Q   D +   D +
Sbjct: 369 VAAVLRKTLAARRNAQDLIDVGAYHRGTNPLVDAALDNEAAINSFLQQRMDDSTPHRDSW 428

Query: 431 QEIT 434
           Q +T
Sbjct: 429 QALT 432


>gi|220932523|ref|YP_002509431.1| flagellar protein export ATPase FliI [Halothermothrix orenii H 168]
 gi|219993833|gb|ACL70436.1| flagellar protein export ATPase FliI [Halothermothrix orenii H 168]
          Length = 437

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 166/398 (41%), Positives = 237/398 (59%), Gaps = 12/398 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACW 101
           +CL    +  GK S    +V+  + D V + P+G    I+ G  V   G +  +      
Sbjct: 45  ICL----IKNGKRSVK-AEVVGFDKDKVLLMPIGEMRGINPGARVVATGEKLTVKVGEGL 99

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G+V+N LG+PI     +  G   + +M++ P  + R+R+ +    GIR ID       G
Sbjct: 100 LGQVLNGLGQPISSGLKMRHGFTEVPVMAQPPDPLLRKRITEPLSLGIRSIDGLLTCGRG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKSTLL M AR+   D  +I LVGERGREVR+FIE  LG + LKKS+VV
Sbjct: 160 QRVGIFAGSGVGKSTLLGMAARNTEADINVIGLVGERGREVRDFIERDLGPEGLKKSIVV 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           VATSD+  ++R  A   A  IAE+F  +G NVLL++DS+TR A + RE+    GE P  R
Sbjct: 220 VATSDKPALVRVKAAYVATAIAEFFRDQGKNVLLMMDSVTRVAMAFREVGLAVGEPPATR 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SV++ELP+LLER G +  + G ITA+ +VLV+GD+ N+P++D+VR ILDGHIVL+R
Sbjct: 280 GYPPSVYAELPKLLERAGTN--QHGTITALYTVLVEGDDFNEPVSDTVRGILDGHIVLSR 337

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LA    YP VD L SVSRL       +  +    +  ++  + E+ D+  IG Y+PG +
Sbjct: 338 DLASRNHYPAVDVLESVSRLMPDIVDEEHLQAAGEVKKMLADYRESEDLINIGAYKPGSN 397

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             +D+A+  +  I  FL+Q     SS   F+E    L+
Sbjct: 398 PAIDRALENINDINTFLRQGIGQKSS---FEETVTMLK 432


>gi|86139477|ref|ZP_01058046.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. MED193]
 gi|85823980|gb|EAQ44186.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. MED193]
          Length = 442

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 162/414 (39%), Positives = 251/414 (60%), Gaps = 4/414 (0%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICP 74
           SK L    G +S I+     ++ L +   +GD  V+ +G   +  G+V++I+ + + + P
Sbjct: 14  SKKLATSMGRVSGISGGEIEISGLEREARIGDRLVLVRGPGDELHGEVLKIDSNKISMLP 73

Query: 75  VGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
               + +++ D V        +P   W GRVI+  G+P+DG   L +G+ + ++M+  P 
Sbjct: 74  DRSPDRVAINDRVKLMPAPDFAPGDNWIGRVIDPFGEPLDGRPLL-RGEKARDLMAPPPK 132

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
           A  R+ +     TG+ V +   P+  GQRIG+FAGSG+GKSTLL+  A+    D V+++L
Sbjct: 133 AAGRRHMGARLDTGLSVFNTILPIVQGQRIGLFAGSGVGKSTLLAKMAQFMQADVVVMAL 192

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREV  F++D LG + +K++VVV ATSD+S ++R+ +   A+TIAE+F  +G NVL
Sbjct: 193 IGERGREVNHFVKDVLGPEGMKRAVVVAATSDQSALVRRRSAWAAMTIAEHFRDQGKNVL 252

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
            + DS+TRFA + REI+  SGE P  RG+P SV   +  L ER GP  + +G+ITAV SV
Sbjct: 253 FMADSVTRFAEAHREISAASGEAPSLRGFPPSVTPLITGLCERAGPGSEGQGDITAVFSV 312

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD   SVSR    A + +E   +
Sbjct: 313 LVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRSLPAAATDEENATI 372

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL-KQSPSDLSS 426
             +   +  +E++  +   G Y  G D++LD+AV   P +  F  K+ P  +S+
Sbjct: 373 LEVRKFLGSYEQSEVMIRAGLYSEGNDVVLDQAVKIWPELDAFFGKEDPQGVSN 426


>gi|15642991|ref|NP_228033.1| flagellum-specific ATP synthase [Thermotoga maritima MSB8]
 gi|4980716|gb|AAD35310.1|AE001706_9 flagellum-specific ATP synthase [Thermotoga maritima MSB8]
          Length = 438

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 166/390 (42%), Positives = 245/390 (62%), Gaps = 11/390 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           +  GKN+  L +V+    + V + P      + +G  V    +   +  S    GRV + 
Sbjct: 49  LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDG 106

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PIDG   + +      +++  P  + R+R++     GIR ID F  +  GQRIG+FA
Sbjct: 107 LGRPIDGKPFVPED--RYPLINNPPNPLKRRRIKDPLPVGIRSIDGFITIGKGQRIGIFA 164

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKSTLL M AR+   D  +++L+GERGREVREFIE  LG+  LK+S++VV+TSD+ 
Sbjct: 165 GSGVGKSTLLGMIARNTTADINVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 224

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  + LTA +IAE+F   G +VLL++DS+TR+A + RE+    GE P  RGYP SVF
Sbjct: 225 ALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVF 284

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP++LER G S+K  G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE   
Sbjct: 285 AGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNH 342

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP VD LASVSRL +   + + ++  + L  L+  +E  +D+  IG Y+ G + ++DKAV
Sbjct: 343 YPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAV 402

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
                I  FLKQ   + +S   F+E  +KL
Sbjct: 403 EMKDEIDSFLKQGVFEKAS---FEETLQKL 429


>gi|242309920|ref|ZP_04809075.1| flagellum-specific ATP synthase [Helicobacter pullorum MIT 98-5489]
 gi|239523217|gb|EEQ63083.1| flagellum-specific ATP synthase [Helicobacter pullorum MIT 98-5489]
          Length = 432

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 160/398 (40%), Positives = 238/398 (59%), Gaps = 5/398 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +   + +   LS  +  GD V    +N +++G V  +  +   I P    E   +
Sbjct: 20  GLVTKVEQGFLSANGLSPRI--GDIVRITNENGNSMGMVTTLEANSFKITPFSFVEGTKV 77

Query: 84  GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V+ +    +I       GRVIN LG+PIDG   L + +  M I+ +   AM R  ++
Sbjct: 78  GDKVYLNTKGLQIPVGLELLGRVINPLGEPIDGKGEL-RAEGLMPIIRQPIAAMKRGMID 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           + F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+GERGREV
Sbjct: 137 EVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGAQAKIKVIALIGERGREV 196

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            EF+E  LG +L  +V+VVATSD+SP++RK     A+++AEYF +KG++VL ++DS+TRF
Sbjct: 197 PEFVEKNLGGDLTNTVLVVATSDDSPLMRKYGAFAAMSVAEYFKAKGEDVLFMMDSVTRF 256

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + REI    GE P ++GYP SV + LP+L+ER G  E+ KG+ITA  +VLV+GD+ +D
Sbjct: 257 AMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-KEEGKGSITAYFTVLVEGDDMSD 315

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PIAD  RSILDGHIVL+RSL + G YPP++ L S SRL       +          L   
Sbjct: 316 PIADQSRSILDGHIVLDRSLTDFGIYPPINILNSASRLMGDVAQKEHILAARKFRRLYSM 375

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +E   +  IG Y+ G D  +D+A+ +   + D+L+Q+
Sbjct: 376 LKENEVLIRIGAYQAGSDKEIDEAIAKKSDMEDYLRQN 413


>gi|56964031|ref|YP_175762.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16]
 gi|56910274|dbj|BAD64801.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16]
          Length = 437

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 159/379 (41%), Positives = 225/379 (59%), Gaps = 7/379 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D + + P+     I+ G  V   G+   ++      G+++N +G+P     +L
Sbjct: 57  EVVGFKDDRILLMPLDDTRRIAPGSYVEGTGKPLNVACGPSLIGQIVNGVGEPFLQSAAL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G  D +    +  P  + R R+ +    G+R ID    +  GQR+G+FAGSG+GKSTL+S
Sbjct: 117 GDTDANYSTDNSPPNPLERPRISEIMSVGVRAIDGLLTMGKGQRVGIFAGSGVGKSTLMS 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  +I+L+GERGREV+EF+E  LG+  LKKSVVVVATSD+  +LR     TA
Sbjct: 177 MIAKQSDADVNVIALIGERGREVKEFVERDLGEEGLKKSVVVVATSDQPALLRVKGAQTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV L++DS+TRFA + REI    GE P  +GYP SVF+ +P+LLER G
Sbjct: 237 TAIAEYFRDKGKNVNLMMDSVTRFAMAQREIGLAIGEPPTTKGYPPSVFAMMPKLLERSG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT + +VLVDGD+ N+PIAD+VR ILDGH VL+R LA  G+YP V+ L SVS
Sbjct: 297 TN--QSGSITGLYTVLVDGDDMNEPIADAVRGILDGHFVLDRQLANRGQYPAVNVLKSVS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL       D           +  +E++ D+  +G Y+ G    +D A+H  P + DFLK
Sbjct: 355 RLMKDLVENDHLHAAKLFRQRLADYEQSEDLISLGAYKQGSSKDIDAAIHDHPAMLDFLK 414

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   ++   D F E   KL
Sbjct: 415 Q---EVEESDSFAETKTKL 430


>gi|222099441|ref|YP_002534009.1| Flagellum-specific ATP synthase [Thermotoga neapolitana DSM 4359]
 gi|221571831|gb|ACM22643.1| Flagellum-specific ATP synthase [Thermotoga neapolitana DSM 4359]
          Length = 431

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 164/390 (42%), Positives = 242/390 (62%), Gaps = 11/390 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           +  GKN+  L +V+      V + P      + +G  V    R   I       GR+ + 
Sbjct: 42  LQNGKNA--LAEVVGFKEGNVVLMPYEDVSGLKMGCEVIRTNRVLEIGVGRNMIGRIFDG 99

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+DG   + +    +   +  P  + R+R++     G+R ID F  +  GQRIG+FA
Sbjct: 100 LGRPLDGRSFVPEARYPL--TNSPPHPLKRKRIKDPLSVGVRAIDGFITIGKGQRIGIFA 157

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKSTLL M AR+   D  +++L+GERGREVREFIE  LG+  LK+S++VV+TSD+ 
Sbjct: 158 GSGVGKSTLLGMIARNTTADVCVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 217

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  + LTA +IAEY+   G +VLL++DS+TR+A + RE+    GE P  RGYP SVF
Sbjct: 218 ALARVKSLLTATSIAEYYRDLGYDVLLMVDSLTRWAMAQREVGLAIGEPPTTRGYPPSVF 277

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP++LER G S++  G+ITAV +VLV+ D+ N+PI+D+VRSI+DGHIVL+R LAE   
Sbjct: 278 AGLPKILERAGNSDR--GSITAVYTVLVEADDFNEPISDTVRSIVDGHIVLSRRLAESNH 335

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LASVSRL +   S + K+  + L  L+  +E  +D+  IG Y+ G + ++DKA+
Sbjct: 336 YPAIDVLASVSRLMNDVVSEEHKEAANRLRSLLASYESAKDLIEIGAYKKGTNPLVDKAI 395

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
                I  FL+Q   + SS   F+E  ++L
Sbjct: 396 EMQEDINAFLRQGIFEKSS---FEETVQRL 422


>gi|311068145|ref|YP_003973068.1| flagellum-specific ATP synthase [Bacillus atrophaeus 1942]
 gi|310868662|gb|ADP32137.1| flagellum-specific ATP synthase [Bacillus atrophaeus 1942]
          Length = 438

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 169/389 (43%), Positives = 235/389 (60%), Gaps = 13/389 (3%)

Query: 43  VCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           VCL    +H   +SD +   +V+    + + + P      IS G +V   G   RI   A
Sbjct: 42  VCL----IHPKGSSDKVIKAEVVGFQDENILLMPYLEAASISPGSIVEATGESLRIKVGA 97

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPL 158
              G+VI+A G+P+DG   L KG LS     + PP  M R  + +    G+R ID    +
Sbjct: 98  GLIGQVIDAFGEPLDGK-LLPKG-LSPVSTDQAPPNPMKRPPIREKMAVGVRSIDSLLTV 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217
             GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGERGREVREFIE  LG + LK+S
Sbjct: 156 GKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGPEGLKRS 215

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVATSD+  ++R  A  TA  IAEYF  KG NV+ ++DS+TR A + REI   +GE P
Sbjct: 216 IVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPP 275

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GY  SVF+ LPRLLER G +E+  G ITA  +VLVDGD+ N+PIAD+VR ILDGHIV
Sbjct: 276 TTKGYTPSVFAILPRLLERTGANEQ--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIV 333

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R+LA +G++P V+ L S+SR+     +       +    L+  ++ + D+  IG Y+ 
Sbjct: 334 LDRALANKGQFPAVNVLKSISRVMSNISAPHHLDAANKFRELLSTYQNSEDLINIGAYKR 393

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G    +D+A+   P +  FLKQ   + S+
Sbjct: 394 GSSREIDEAIQFYPQLIQFLKQGTEESST 422


>gi|330447946|ref|ZP_08311594.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492137|dbj|GAA06091.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 450

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 154/366 (42%), Positives = 226/366 (61%), Gaps = 5/366 (1%)

Query: 61  QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + +I Y+ PV  +G   +   ++   G   ++ S  W GRV+N LG+P+D  + L
Sbjct: 61  QVVGFDHNIAYLMPVRQLGGLYAGAKVIPMQGGSTVNVSHEWIGRVVNGLGEPLDNGEPL 120

Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             G+ LS+E     P  M RQ VE     GI+ I+    +  GQRIG+ AGSG+GKS L+
Sbjct: 121 QGGERLSLEPKPINP--MKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLM 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237
            M  +    D +++ L+GERGREVREFIE  LG+   K++V++ A +DESP++R  A   
Sbjct: 179 GMITQFTAADIIVVGLIGERGREVREFIERNLGEEGRKRAVIIAAPADESPLMRLRATKL 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AEYF  +G +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER 
Sbjct: 239 CHRVAEYFRDQGKDVLLMMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E   G++TA+ +VL +GD+  DP+ DS R+ILDGHIVL+R+LAE+G YP +D  AS+
Sbjct: 299 GNGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASI 358

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR            + +    L   +++ +++  +GGY+ G D  LD+AV   P +  FL
Sbjct: 359 SRCMSSCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFL 418

Query: 418 KQSPSD 423
           +Q  S+
Sbjct: 419 QQPVSE 424


>gi|170288527|ref|YP_001738765.1| flagellar protein export ATPase FliI [Thermotoga sp. RQ2]
 gi|170176030|gb|ACB09082.1| flagellar protein export ATPase FliI [Thermotoga sp. RQ2]
          Length = 438

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 167/391 (42%), Positives = 245/391 (62%), Gaps = 13/391 (3%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           +  GKN+  L +V+    + V + P      + +G  V    +   +  S    GRV + 
Sbjct: 49  LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDG 106

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
           LG+PIDG   + +    +   +  PP  + R+R++     GIR ID F  +  GQRIG+F
Sbjct: 107 LGRPIDGKPFVPEDRYPL---TNTPPNPLKRRRIKDPLPVGIRSIDGFITVGKGQRIGIF 163

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKSTLL M AR+   D  +++L+GERGREVREFIE  LG+  LK+S++VV+TSD+
Sbjct: 164 AGSGVGKSTLLGMIARNTTADINVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQ 223

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             + R  + LTA +IAE+F   G +VLL++DS+TR+A + RE+    GE P  RGYP SV
Sbjct: 224 PALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSV 283

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LP++LER G S+K  G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE  
Sbjct: 284 FAGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESN 341

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP VD LASVSRL +   + + ++  + L  L+  +E  +D+  IG Y+ G + ++DKA
Sbjct: 342 HYPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKA 401

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           V     I  FLKQ   + +S   F+E  +KL
Sbjct: 402 VEMKDEIDSFLKQGVFEKAS---FEETLQKL 429


>gi|90577384|ref|ZP_01233195.1| putative flagellum-specific ATP synthase [Vibrio angustum S14]
 gi|90440470|gb|EAS65650.1| putative flagellum-specific ATP synthase [Vibrio angustum S14]
          Length = 449

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 151/361 (41%), Positives = 222/361 (61%), Gaps = 3/361 (0%)

Query: 61  QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + +I Y+ PV  +G   +   ++   G   ++ S  W GRV+N LG+P+D    L
Sbjct: 61  QVVGFDHNIAYLMPVRQLGGLYAGAKVIPMQGGSTVNVSHKWIGRVVNGLGEPLDNGSPL 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+ S+ +  K    M RQ VE     GI+ I+    +  GQRIG+ AGSG+GKS L+ 
Sbjct: 121 QGGE-SLSLEPKPINPMKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLMG 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M  +    D +++ L+GERGREVREFIE  LG+   K++V++ A +DESP++R  A    
Sbjct: 180 MITKYTAADIIVVGLIGERGREVREFIERNLGEEGRKRAVIIAAPADESPLMRLRATKLC 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G
Sbjct: 240 HRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+ +VL +GD+  DP+ DS R+ILDGHIVL+R+LAE+G YP +D  AS+S
Sbjct: 300 NGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASIS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R            + +    L   +++ +++  +GGY+ G D  LD+AV   P +  FL+
Sbjct: 360 RCMSSCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFLQ 419

Query: 419 Q 419
           Q
Sbjct: 420 Q 420


>gi|126697822|ref|YP_001086719.1| flagellum-specific ATP synthase [Clostridium difficile 630]
 gi|115249259|emb|CAJ67072.1| ATP synthase subunit beta FliI [Clostridium difficile]
          Length = 439

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%)

Query: 97  PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           P +  C     G+V++ LG PID  D++  GD    + ++ P  M R+++    +TG+R 
Sbjct: 95  PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID FT    GQRIG+FAGSG+GKST L M AR+   D  +I+L+GERGREV +FI+  LG
Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           +  +KKSVVV ATSD++P++R    LTA  IAEYF  +G  V+L++DS+TRFA + RE+ 
Sbjct: 213 EEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              GE P  +GY  SVF+ LP+L+ER G S+K  G+ITA  +VLVDGD+ N+PIAD+ R 
Sbjct: 273 VAIGEPPAQKGYTPSVFAMLPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL+R LA +  YP +D L S+SRL ++  S ++ K+ S    ++  + E  D+ 
Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            IG Y  G +  +D+A++    I +FLKQ  ++ SS   F E    L+
Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435


>gi|77464910|ref|YP_354414.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77389328|gb|ABA80513.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 436

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 169/414 (40%), Positives = 244/414 (58%), Gaps = 2/414 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           LAE  + +L  + G ++ I     +V  L Q   LGD V   G      G+V+R++   V
Sbjct: 9   LAEIAAISLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  E +++GD V   G   I+P   W GR+++ LG+P+DG   L +G  +  + +
Sbjct: 69  TILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P A  R+ +     TG+ V D   PL  GQRIG+FAGSG+GKS+LL+ FARS   D V
Sbjct: 128 AAPQAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187

Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I LVGERGRE+REF E  LG   + ++VVV ATSD+SP++R+     A+ +AE+F  +G
Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+A   GE    RG+P S    +  L ER GP  +  G+ITA
Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V SVLV G +  +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR   +A S  E
Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASTAE 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L++    L+  ++    +   G Y  G D ++D A+   P +  FL +  SD
Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDASD 421


>gi|255022048|ref|ZP_05294054.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
 gi|254968534|gb|EET26090.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
          Length = 448

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 164/374 (43%), Positives = 213/374 (56%), Gaps = 15/374 (4%)

Query: 58  NLGQVIRINLDIVYICPVG------IGEEISLGDLVFHWGRFRISPSACWCGRVINALGK 111
            LG+VI  + D   + P G       G  + L D         ++      GRVI+A G+
Sbjct: 68  RLGEVIGFHGDRAAVMPFGGLRGVFAGASVILADQ-----DSMVAVGDALLGRVIDAQGR 122

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG   L      +      P  ++R R+ K    G+R I+    +  GQRIG+FAGSG
Sbjct: 123 PLDGRPLLATQRRPLR--QPAPHPLHRARIVKPLDVGVRAINALLTVGEGQRIGLFAGSG 180

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILR 231
           +GKS LL M AR    D V+I+L+GERGREVREF+ED LGD L  SV+VVAT+D  PILR
Sbjct: 181 VGKSVLLGMMARHTQADVVVIALIGERGREVREFVEDILGDGLSHSVLVVATADAPPILR 240

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE+F  +G  VLLI+DS+TR+A + RE+   +GELP  +GYP SVFS L 
Sbjct: 241 MRGAEYATAIAEHFRDQGKRVLLIMDSLTRYAMAAREVGLTAGELPATKGYPPSVFSTLS 300

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ER G +  E G ITA  SVL +GD+  DP+AD+ RSILDGHIVL+R LA  G  P +
Sbjct: 301 VLTERAGTA--ENGAITAFYSVLTEGDDLQDPVADAARSILDGHIVLSRDLAAAGVLPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           DP  S SR+       +   LV  +      + E  D+  IG YR G D  LD A+ + P
Sbjct: 359 DPAVSASRVMRSIVDTEHLALVQRVMSWWGNYREKSDLIAIGAYRQGSDPTLDMAMQKYP 418

Query: 412 IIYDFLKQSPSDLS 425
            I DFL+Q P + S
Sbjct: 419 AILDFLRQHPEESS 432


>gi|154249443|ref|YP_001410268.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153379|gb|ABS60611.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum
           Rt17-B1]
          Length = 443

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 172/423 (40%), Positives = 254/423 (60%), Gaps = 11/423 (2%)

Query: 1   MQKNLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +Q+N++ L ++ ED  K L      G +  I  +  T+        LG+       N   
Sbjct: 6   LQENIKFL-EIIEDKVKKLNPYEYAGEVQKIIGL--TIESRGPDAALGELCKILVGNKKA 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDD 117
           L +V+    D+  + P+     +  G  V   GR    P      GRVI+ALG+PIDG  
Sbjct: 63  LAEVVGFKEDLTILMPLEDVTGLKKGCEVLKTGRTVSVPVGEELKGRVIDALGRPIDGKR 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K     +I+S+ P  + R+R+ +    G+R ID F  L  GQRIG+FAGSG+GKSTL
Sbjct: 123 LVLKE--YRQIVSEAPNPLIRKRILEPLPVGVRAIDGFLTLGKGQRIGIFAGSGVGKSTL 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREVREFIE  LG+  +K+SVVVV+TSD+  +LR  A L
Sbjct: 181 LGMIARNTTADINVIALIGERGREVREFIEKDLGEEGIKRSVVVVSTSDQPALLRIKALL 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA TIAEYF  KG  V+L++DS+TR+A + RE+    GE P  RGYP SVF++LP++LER
Sbjct: 241 TATTIAEYFRDKGYAVMLMVDSLTRWAMAQREVGLAIGEPPTTRGYPPSVFAQLPKILER 300

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S  +KG+IT + +VLV+ D+ N+PI+D+VR I+DGHI+L+R LAE   +P +D L S
Sbjct: 301 AGNS--DKGSITGIYTVLVEADDFNEPISDTVRGIVDGHIILSRKLAESNHFPAIDVLMS 358

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL       +  +   ++  +I  + + +D+  +G Y+ G +  +DK++  +  I  F
Sbjct: 359 ISRLMVDITKPEHIQSARAIRDIIATYNDAKDLIDVGAYKKGANPKIDKSIELIDEINKF 418

Query: 417 LKQ 419
           L+Q
Sbjct: 419 LRQ 421


>gi|221636054|ref|YP_002523930.1| flagellar protein export ATPase FliI [Thermomicrobium roseum DSM
           5159]
 gi|221157913|gb|ACM07031.1| flagellar protein export ATPase FliI [Thermomicrobium roseum DSM
           5159]
          Length = 450

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 162/360 (45%), Positives = 223/360 (61%), Gaps = 14/360 (3%)

Query: 87  VFHWGRFRISPSAC-------WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           V H  R   +P A          GRVI+ LG+PIDG   L +    + I    P  + R 
Sbjct: 82  VRHGSRVVRAPEALHVPVGPELLGRVIDGLGRPIDGKGPL-RCRRRLRIGGAPPSPLQRA 140

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +     TG+R ID       GQR+G+FAGSG+GKSTLL M +R+   D  +I+L+GERG
Sbjct: 141 PIRDILPTGVRTIDALLTCGRGQRLGIFAGSGVGKSTLLGMISRNAVCDVRVIALIGERG 200

Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV+EFIE  LG   L+++VVVV+TSD+  ++R  A  TA  IAEYF  +G +V+L++DS
Sbjct: 201 REVQEFIERDLGPAGLEQAVVVVSTSDQPALMRIKAAWTATLIAEYFRDRGMSVVLMMDS 260

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR A + RE+   +GE P  RGYP SVF+ LPRLLER G    E+G+ITA  +VLV+GD
Sbjct: 261 VTRLAMAQREVGLAAGEPPATRGYPPSVFALLPRLLERAG--NAEQGSITAFYTVLVEGD 318

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PI+D+VR ILDGHIVL R+LA+ G YP +D LASVSRL     + D + L S +  
Sbjct: 319 DLNEPISDTVRGILDGHIVLARTLADRGHYPAIDVLASVSRLMPSLVTPDHRALASEVRE 378

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           L+  +E  RD+  IG Y  G +  +D+A+  +P I  FL+Q P + ++   F E    L+
Sbjct: 379 LLAAYESARDLIDIGAYVHGTNPTVDRALSLMPEIRRFLQQKPEERAT---FAETVAWLE 435


>gi|260574407|ref|ZP_05842411.1| ATPase, FliI/YscN family [Rhodobacter sp. SW2]
 gi|259023303|gb|EEW26595.1| ATPase, FliI/YscN family [Rhodobacter sp. SW2]
          Length = 437

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 170/431 (39%), Positives = 255/431 (59%), Gaps = 6/431 (1%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           LA++A   + +LV   G I+ I      V  L++   LGD V+ +G  +   G+V+R+  
Sbjct: 9   LAEIAGVQTTSLV---GRIAEIGRGTLRVAGLTEASALGDRVLIRGSGAVLGGEVLRLAR 65

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           + V + P G  E +++GD V   GR  I+P   W GR+I+  GKP+DG  +L +G     
Sbjct: 66  EGVTVLPDGSAEGLAIGDAVELVGRAEIAPDDSWIGRIIDPFGKPLDGR-ALFRGPKPRP 124

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +    P A  R+R+ +   T + V D   PL  GQRIG+FAGSG+GKS+LL+ FAR    
Sbjct: 125 LRDAAPAAATRRRLGERLSTSVAVFDTLLPLVRGQRIGLFAGSGVGKSSLLAKFARGVTA 184

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D V+I+LVGERGRE+REF +  LG   + +SVVV ATSD+SP++R+    TA+ +AE+F 
Sbjct: 185 DVVVIALVGERGRELREFTDRVLGPQGMARSVVVTATSDQSPLIRRRCAWTAMAVAEHFR 244

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL + DSITRFA + RE+   +GE    RG+P S    +  L ER GP  +  G+
Sbjct: 245 DQGLHVLFLADSITRFAEAHREVVLAAGEEGNLRGFPPSTSHTIMSLAERAGPGPEGMGD 304

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITAV SVLV G + ++P+AD +R +LDGH+V++R +AE GRYP +D L SVSR   +A +
Sbjct: 305 ITAVFSVLVAGSDMDEPVADILRGVLDGHVVMDRKIAERGRYPAIDLLRSVSRSLPEAAN 364

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             E  +++    L+  ++    +   G Y  G D ++D A+   P +  FL +  +D   
Sbjct: 365 LAENAMIAEARRLLGAYDRAEMMIQAGLYAKGSDPMVDAAIRVWPALDAFLAEDAAD-GV 423

Query: 427 EDVFQEITKKL 437
           E  F+++   L
Sbjct: 424 EGSFRKLAACL 434


>gi|78045988|ref|YP_362163.1| type III secretion system ATPase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325927683|ref|ZP_08188911.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           perforans 91-118]
 gi|462306|sp|P80153|HRPB6_XANEU RecName: Full=Probable ATP synthase hrpB6
 gi|398113|gb|AAA27605.1| AA: 163-179 mononucleotide binding box A; 193-207 magnesium binding
           domain; 244-256 mononucleotide binding box B
           [Xanthomonas campestris]
 gi|984883|gb|AAB08461.1| HrpB6 [Xanthomonas euvesicatoria]
 gi|78034418|emb|CAJ22063.1| HrcN protein [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|325541884|gb|EGD13398.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           perforans 91-118]
          Length = 442

 Score =  285 bits (730), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 161/377 (42%), Positives = 226/377 (59%), Gaps = 6/377 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +    D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVPYDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419

Query: 419 QSPSDLSS-EDVFQEIT 434
           Q    LS+ E+  + +T
Sbjct: 420 QPTDQLSAYENTLELLT 436


>gi|120554911|ref|YP_959262.1| flagellum-specific ATP synthase [Marinobacter aquaeolei VT8]
 gi|120324760|gb|ABM19075.1| flagellar protein export ATPase FliI [Marinobacter aquaeolei VT8]
          Length = 463

 Score =  285 bits (730), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 155/391 (39%), Positives = 230/391 (58%), Gaps = 4/391 (1%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
           V  T+ C+   + +GD  + QG ++ ++  +V+    D VY+ P+   E +  G  V   
Sbjct: 32  VGLTLECVGCPMVVGDRCLIQGDSATSVEAEVVGFEEDKVYLMPLTAIEGLKPGARVIPL 91

Query: 91  GRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
               R+       GRV+N  G P+DG   L + +  +++   +   +NR  V +    GI
Sbjct: 92  ASASRVPVGPQMLGRVVNGAGDPLDGKGPL-QAEARVQLTGDIINPLNRAPVRQSMDVGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           R I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGREV+EFIED 
Sbjct: 151 RAINALLTVGQGQRLGLFAGSGVGKSMLLGMMTRFTDADITVVGLIGERGREVKEFIEDI 210

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LGD  L +SVVV A +D+SP++R  A +    IAEY+  +G  VLL++DS+TR+A + RE
Sbjct: 211 LGDEGLARSVVVAAPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSLTRYAQAQRE 270

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA   GE P  +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ 
Sbjct: 271 IALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIADAA 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+R LAEEG YP +D  AS+SR+  +   ++          +  R+++ RD
Sbjct: 331 RAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTDSEHFSRAQRFKQVYSRYQQARD 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +G Y  G D   D A+  +  +  FL+Q
Sbjct: 391 LISVGAYVKGSDPETDFAIQHIGNMSQFLQQ 421


>gi|88800457|ref|ZP_01116021.1| flagellum-specific ATP synthase [Reinekea sp. MED297]
 gi|88776787|gb|EAR07998.1| flagellum-specific ATP synthase [Reinekea sp. MED297]
          Length = 486

 Score =  285 bits (730), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 154/352 (43%), Positives = 216/352 (61%), Gaps = 22/352 (6%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEI 128
           + P+ +  E+ +GD +               GRV+N  G+PIDG  +L    +  L+ E 
Sbjct: 88  VVPLEVANELVIGDELL--------------GRVVNGFGEPIDGKGALLCRAQQSLNGEY 133

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
           ++     ++R+ + +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D
Sbjct: 134 INP----LHREPIRQPLDVGIRAINSLLTVGRGQRLGLFAGSGVGKSVLLGMMTRFTDAD 189

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             I+ L+GERGREV+EFIE+ LGD  L +SVVV + +D++P+LR  A      IAEYF S
Sbjct: 190 ITIVGLIGERGREVKEFIEEILGDEGLARSVVVASPADDAPLLRLRAAQYTTAIAEYFRS 249

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+I
Sbjct: 250 QGKTVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFARLPQLVERAGNAEKGGGSI 309

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R+ILDGH VLNR LAEEG YP +D   S+SR+  +  S 
Sbjct: 310 TAFYTVLTEGDDQQDPIADSSRAILDGHFVLNRKLAEEGHYPAIDIEQSISRVMPQVVSE 369

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           D  K   +   L   + + RD+  IG Y  G +  +D+A+   PII DFL+Q
Sbjct: 370 DHLKAAQATKQLWSTYSQNRDLISIGAYTKGSNQEIDQAIALQPIIRDFLRQ 421


>gi|294625830|ref|ZP_06704446.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599858|gb|EFF43979.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 448

 Score =  285 bits (729), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 161/376 (42%), Positives = 225/376 (59%), Gaps = 11/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E+   TG+R++D  T L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MG--ENGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV------PI 412
           R+  +   +D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++        
Sbjct: 360 RVMSQIVPSDHSQAAGQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIDKFDA 419

Query: 413 IYDFLKQSPSDLSSED 428
           I DFL Q    LS+ D
Sbjct: 420 IRDFLSQPTDQLSAYD 435


>gi|88858105|ref|ZP_01132747.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2]
 gi|88819722|gb|EAR29535.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2]
          Length = 442

 Score =  285 bits (729), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 152/362 (41%), Positives = 223/362 (61%), Gaps = 3/362 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  N D++Y+ P      +  G  V    +    P      GRV++ LG+PIDG   +
Sbjct: 61  EVVGFNGDVLYLMPNDALSGVLPGARVIPQVKEAGLPVGMSLLGRVVDGLGRPIDGLGPI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K +  ++        + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 121 -KAEKKLKFAQNAINPLARRAITQPMDVGVRAINAVITVGQGQRMGLFAGSGVGKSVLLG 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D +++ LVGERGREV+EFIE+ LGD   K+SVVV A +D SP++R     TA
Sbjct: 180 MMTRGTSADVIVVGLVGERGREVKEFIEEILGDEGRKRSVVVAAPADASPLMRLKGCETA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAEYF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G
Sbjct: 240 VTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+S
Sbjct: 300 NGGKGQGSITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRELADSGHYPAIDIEKSIS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S    +    L  +   +++ +D+  +G Y+ G D ILDK++  +P++  FL+
Sbjct: 360 RVMPQVVSEAHMQQARVLKQVYSLYQQNKDLITLGAYQKGADPILDKSISMMPMVNGFLQ 419

Query: 419 QS 420
           Q+
Sbjct: 420 QT 421


>gi|153934199|ref|YP_001384903.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936379|ref|YP_001388372.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           Hall]
 gi|152930243|gb|ABS35743.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932293|gb|ABS37792.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           Hall]
          Length = 438

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 239/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERTGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D A
Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +S +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---ISEQHSFEESTSILQ 433


>gi|294679037|ref|YP_003579652.1| flagellar protein export ATPase FliI [Rhodobacter capsulatus SB
           1003]
 gi|294477857|gb|ADE87245.1| flagellar protein export ATPase FliI [Rhodobacter capsulatus SB
           1003]
          Length = 440

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 156/402 (38%), Positives = 238/402 (59%), Gaps = 3/402 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G +  +      V+ L+    LGD      ++    G +VI +    V +      E ++
Sbjct: 23  GRVFEVGKGTIEVSGLTTRATLGDRARIHAQSGPVFGAEVIALRRGAVTLLADCAVEGVA 82

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           +GD V   G+  I+P   W GR+++  G+P+DG   L +G     I +  PPA  R+R+ 
Sbjct: 83  IGDRVEVLGQAGIAPDDSWIGRIVDPFGRPLDGRPLL-RGGHDRNIRATPPPAAFRRRLG 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +  +TG+   +   PL  GQRIG+FAGSG+GKS+LL+ FA+    D V+I+L+GERGRE+
Sbjct: 142 ERVETGLDAFNTLLPLVRGQRIGLFAGSGVGKSSLLAKFAKGVAADVVVIALIGERGREL 201

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+E  LG + + +SV+V ATSD+SP++R+     A+T+AEYF  +G +VL + DS+TR
Sbjct: 202 REFVEKTLGPEGMARSVIVAATSDQSPLVRRRCGWAAMTVAEYFRDQGKHVLFLADSVTR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+A  +GE P  RGYP S   ++  L ER GP  +  G+ITAV SVLV G +  
Sbjct: 262 FAEAHREVALAAGEPPSLRGYPPSTSHQIMSLAERSGPGMEGAGDITAVFSVLVAGSDME 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD +R  LDGH+VL+R +AE GR+P +D L SVSR   +A +  E +L++    L+ 
Sbjct: 322 EPVADILRGTLDGHVVLDRGIAERGRFPAIDLLRSVSRSLPEAATPAENELIAKARKLLG 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            ++    +   G Y  G D ++D A+   P +  FL +  +D
Sbjct: 382 AYDRAEMMIQAGLYAAGSDPVIDAAIKVWPALDGFLARDAAD 423


>gi|256376470|ref|YP_003100130.1| ATPase, FliI/YscN family [Actinosynnema mirum DSM 43827]
 gi|255920773|gb|ACU36284.1| ATPase, FliI/YscN family [Actinosynnema mirum DSM 43827]
          Length = 439

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/338 (44%), Positives = 221/338 (65%), Gaps = 5/338 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P+DG   L  G  S+ +    P A+ RQ ++K  + G+R +D   P   GQ
Sbjct: 100 GRVLDGLGRPMDGGPPL-VGLESVTVDMTPPSALQRQLIDKPLQLGVRALDTMVPCGQGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS+LLSM  R    +  +++L+GERGREVREFIE+ LG + L +SVVVV
Sbjct: 159 RIGIFAGSGVGKSSLLSMITRGTEAEITVVALIGERGREVREFIENDLGPEGLARSVVVV 218

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+ P++R  A   A  IAE++  +G N LL++DS+TR A + RE+  ++GE P  RG
Sbjct: 219 ATSDQPPMVRLRAGFVATRIAEWYRDRGANALLMMDSLTRIAMAQREVGLSAGEPPATRG 278

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+ +P LLER GP+E+  G+IT + +VLV+GD+HN+PIAD+ RSILDGH+VL+R 
Sbjct: 279 FPPSVFALMPTLLERAGPAER--GSITGLYTVLVEGDDHNEPIADTARSILDGHVVLDRR 336

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA  G +P +D L SVSR+     + +++   + L  L+    + R++  IG Y  G +L
Sbjct: 337 LATSGHFPSIDVLESVSRVTGAVTTPEQRADAAQLRRLLAARRDVRELVEIGAYVGGTNL 396

Query: 402 ILDKAVHQVPIIYDFLKQS-PSDLSSEDVFQEITKKLQ 438
             D+A+   P I   L Q   +  S+E  ++E+ + L 
Sbjct: 397 DADRAMALEPRINGLLTQDIHARTSAESSWEELRELLH 434


>gi|260886634|ref|ZP_05897897.1| flagellar protein export ATPase FliI [Selenomonas sputigena ATCC
           35185]
 gi|330839534|ref|YP_004414114.1| ATPase, FliI/YscN family [Selenomonas sputigena ATCC 35185]
 gi|260863777|gb|EEX78277.1| flagellar protein export ATPase FliI [Selenomonas sputigena ATCC
           35185]
 gi|329747298|gb|AEC00655.1| ATPase, FliI/YscN family [Selenomonas sputigena ATCC 35185]
          Length = 475

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 168/375 (44%), Positives = 231/375 (61%), Gaps = 16/375 (4%)

Query: 70  VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL---- 124
           V + P+G  + I  G ++V      ++       GRV++ LG+PIDG     KG L    
Sbjct: 109 VLLMPIGEMQGIGPGCEVVSAQKTLQVQVGPELLGRVLDGLGEPIDG-----KGPLLCKH 163

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              + +  P  + R R+      G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+
Sbjct: 164 EYPLQADPPSPLERPRIRDSLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARN 223

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+LVGERGREV+EFIE  LG+  LK+SVVVVATSD+  ++R    +TA  IAE
Sbjct: 224 TEADISVIALVGERGREVKEFIERDLGEEGLKRSVVVVATSDKPALVRIKGAMTATAIAE 283

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G  V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G S K 
Sbjct: 284 YFRDQGKRVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFALLPRLLERAGTSRK- 342

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R++A +  +P +D LASVSR+ ++
Sbjct: 343 -GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRAIAAQNHFPAIDVLASVSRVMNE 401

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                  K   +L  L+  ++E  D+  IG Y  G    +D AV ++  I DFL+Q   +
Sbjct: 402 VVDEAHLKASQNLRALMAVYKEAEDLIHIGAYVKGSSQKIDTAVAKIDAINDFLRQGVFE 461

Query: 424 LSSEDVFQEITKKLQ 438
            SS   ++E  K L+
Sbjct: 462 QSS---YEETEKTLE 473


>gi|281412275|ref|YP_003346354.1| flagellar protein export ATPase FliI [Thermotoga naphthophila
           RKU-10]
 gi|281373378|gb|ADA66940.1| flagellar protein export ATPase FliI [Thermotoga naphthophila
           RKU-10]
          Length = 438

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/390 (42%), Positives = 243/390 (62%), Gaps = 11/390 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           +  GKN+  L +V+    + V + P      + +G  V    +   +  S    GRV + 
Sbjct: 49  LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDG 106

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PIDG   + +      + +  P  + R+R++     GIR ID    +  GQRIG+FA
Sbjct: 107 LGRPIDGKPFVPED--RYPLTNNPPNPLKRRRIKDPLPVGIRSIDGLITVGKGQRIGIFA 164

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKSTLL M AR+   D  +++L+GERGREVREFIE  LG+  LK+S++VV+TSD+ 
Sbjct: 165 GSGVGKSTLLGMIARNTTADVNVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 224

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  + LTA +IAE+F   G +VLL++DS+TR+A + RE+    GE P  RGYP SVF
Sbjct: 225 ALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVF 284

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP++LER G S+K  G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE   
Sbjct: 285 AGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNH 342

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP VD LASVSRL +   + + ++  + L  L+  +E  +D+  IG Y+ G + ++DKAV
Sbjct: 343 YPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAV 402

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
                I  FLKQ   + SS   F+E  +KL
Sbjct: 403 EMKDEIDSFLKQGVFEKSS---FEETLQKL 429


>gi|255099418|ref|ZP_05328395.1| flagellum-specific ATP synthase [Clostridium difficile QCD-63q42]
          Length = 439

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%)

Query: 97  PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           P +  C     G+V++ LG PID  D++  GD    + ++ P  M R+++    +TG+R 
Sbjct: 95  PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID FT    GQRIG+FAGSG+GKST L M AR+   D  +I+L+GERGREV +FI+  LG
Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           +  +KKSVVV ATSD++P++R    LTA  IAEYF  +G  V+L++DS+TRFA + RE+ 
Sbjct: 213 EEGMKKSVVVYATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              GE P  +GY  SVF+ LP+L+ER G S+K  G+ITA  +VLVDGD+ N+PIAD+ R 
Sbjct: 273 VAIGEPPAQKGYTPSVFAILPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL+R LA +  YP +D L S+SRL ++  S ++ K+ S    ++  + E  D+ 
Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            IG Y  G +  +D+A++    I +FLKQ  ++ SS   F E    L+
Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435


>gi|327399350|ref|YP_004340219.1| ATPase, FliI/YscN family [Hippea maritima DSM 10411]
 gi|327181979|gb|AEA34160.1| ATPase, FliI/YscN family [Hippea maritima DSM 10411]
          Length = 434

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 175/421 (41%), Positives = 249/421 (59%), Gaps = 15/421 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           NL+V  G I  +  +    T   + V +GD    +        +V+  + D V + P+G+
Sbjct: 15  NLIVTYGRIKKVAGITIKSTG-PKNVKIGDVCKIETDEGWIDSEVVGFDEDGVVLMPLGV 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKV 132
            + +    LV   GR   +  S    GRV+NALG+PIDG     KG + +E    +  K 
Sbjct: 74  LDGVKSLSLVKSEGRGLSVPVSERLLGRVVNALGRPIDG-----KGPIPVEEYYPVYPKP 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
            P + RQ +++    G++ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +I
Sbjct: 129 VPPLERQIIKEPLSLGVKAIDGLLTIGKGQRVGIFAGSGVGKSTLLGMIARNSSADVNVI 188

Query: 193 SLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFIE D   + LK+SVVVVATSDE+ +LR+     A +IAE+F  +G N
Sbjct: 189 ALIGERGREVREFIERDLKEEGLKRSVVVVATSDEASLLRREGAFVATSIAEFFKDRGAN 248

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L++DS TRFA + REI    GE P  +GY  SVF+ LPRL+ER G     KG+ITA+ 
Sbjct: 249 VMLMMDSATRFAMAQREIGLAVGEPPTTKGYTPSVFTLLPRLMERAG--NFNKGSITAIY 306

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+  +PIAD+ RSILDGHIVL+R +AE GRYP VD L S+SRL     + + K+
Sbjct: 307 TVLVDGDDLMEPIADASRSILDGHIVLSRKIAERGRYPAVDVLRSISRLMSSITTDEHKE 366

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVF 430
           L   +  ++  + +  D+  IG Y  G +  +D+A+  +  +  FL Q   +  S ED  
Sbjct: 367 LALKIRKVLSVYADAEDLINIGAYVKGSNKDIDEAIKYIDKVEGFLAQKIEESFSFEDTL 426

Query: 431 Q 431
            
Sbjct: 427 N 427


>gi|149182506|ref|ZP_01860979.1| flagellum-specific ATP synthase [Bacillus sp. SG-1]
 gi|148849766|gb|EDL63943.1| flagellum-specific ATP synthase [Bacillus sp. SG-1]
          Length = 440

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 161/362 (44%), Positives = 225/362 (62%), Gaps = 7/362 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V + P     EIS G LV    +   I       G+V+++LG P+DG+ SL
Sbjct: 57  EVVGFKEETVILMPYSNINEISPGSLVEATSKPLTIKVGHSLIGKVVDSLGNPLDGE-SL 115

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
            KG L+     + PP+ + R  + +  + G+R ID    +  GQR+G+FAGSG+GKSTLL
Sbjct: 116 PKG-LTPAFTEQDPPSPLTRPPINEKIEVGVRAIDSMLTVGKGQRVGIFAGSGVGKSTLL 174

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREVREFIE  LG+  LKKS+VV ATSD+  ++R     T
Sbjct: 175 GMIARNTTADLNVIALIGERGREVREFIERDLGEEGLKKSIVVAATSDQPALMRIKGAFT 234

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  KG NV+L++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER 
Sbjct: 235 ATAIAEYFRDKGMNVMLMMDSVTRVAMAQREIGLAVGEPPATKGYTPSVFAILPKLLERT 294

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G +E   G ITA  +VLVDGD+ N+PIAD+ R ILDGHIVL+R++A +G++P ++ L SV
Sbjct: 295 GTNEH--GTITAFYTVLVDGDDMNEPIADTTRGILDGHIVLDRNIANKGQFPAINVLRSV 352

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL +   S D  +    +  L+  +  + D+  IG Y+ G    +D+A+   P I  FL
Sbjct: 353 SRLMNHLASPDHLRAAEKIRELMSTYSNSEDLINIGAYKKGTSQEIDQAITYQPKILSFL 412

Query: 418 KQ 419
           KQ
Sbjct: 413 KQ 414


>gi|254973915|ref|ZP_05270387.1| flagellum-specific ATP synthase [Clostridium difficile QCD-66c26]
 gi|255091301|ref|ZP_05320779.1| flagellum-specific ATP synthase [Clostridium difficile CIP 107932]
 gi|255312959|ref|ZP_05354542.1| flagellum-specific ATP synthase [Clostridium difficile QCD-76w55]
 gi|255515718|ref|ZP_05383394.1| flagellum-specific ATP synthase [Clostridium difficile QCD-97b34]
 gi|255648812|ref|ZP_05395714.1| flagellum-specific ATP synthase [Clostridium difficile QCD-37x79]
 gi|260682031|ref|YP_003213316.1| flagellum-specific ATP synthase [Clostridium difficile CD196]
 gi|260685629|ref|YP_003216762.1| flagellum-specific ATP synthase [Clostridium difficile R20291]
 gi|306518927|ref|ZP_07405274.1| flagellum-specific ATP synthase [Clostridium difficile QCD-32g58]
 gi|260208194|emb|CBA60534.1| flagellum-specific ATP synthase [Clostridium difficile CD196]
 gi|260211645|emb|CBE01900.1| flagellum-specific ATP synthase [Clostridium difficile R20291]
          Length = 439

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%)

Query: 97  PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           P +  C     G+V++ LG PID  D++  GD    + ++ P  M R+++    +TG+R 
Sbjct: 95  PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID FT    GQRIG+FAGSG+GKST L M AR+   D  +I+L+GERGREV +FI+  LG
Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           +  +KKSVVV ATSD++P++R    LTA  IAEYF  +G  V+L++DS+TRFA + RE+ 
Sbjct: 213 EEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              GE P  +GY  SVF+ LP+L+ER G S+K  G+ITA  +VLVDGD+ N+PIAD+ R 
Sbjct: 273 IAIGEPPAQKGYTPSVFAILPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL+R LA +  YP +D L S+SRL ++  S ++ K+ S    ++  + E  D+ 
Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            IG Y  G +  +D+A++    I +FLKQ  ++ SS   F E    L+
Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435


>gi|255305275|ref|ZP_05349447.1| flagellum-specific ATP synthase [Clostridium difficile ATCC 43255]
          Length = 439

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%)

Query: 97  PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           P +  C     G+V++ LG PID  D++  GD    + ++ P  M R+++    +TG+R 
Sbjct: 95  PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID FT    GQRIG+FAGSG+GKST L M AR+   D  +I+L+GERGREV +FI+  LG
Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           +  +KKSVVV ATSD++P++R    LTA  IAEYF  +G  V+L++DS+TRFA + RE+ 
Sbjct: 213 EEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              GE P  +GY  SVF+ LP+L+ER G S+K  G+ITA  +VLVDGD+ N+PIAD+ R 
Sbjct: 273 IAIGEPPAQKGYTPSVFAILPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL+R LA +  YP +D L S+SRL ++  S ++ K+ S    ++  + E  D+ 
Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            IG Y  G +  +D+A++    I +FLKQ  ++ SS   F E    L+
Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435


>gi|238927415|ref|ZP_04659175.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
 gi|238884697|gb|EEQ48335.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 165/371 (44%), Positives = 228/371 (61%), Gaps = 11/371 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS-LGKGDLSME 127
           V + PVG  + I  G  V   GR  R+       GRV++ LG PIDG    L K +  ++
Sbjct: 80  VLLMPVGEMQGIGPGCEVVATGRRLRVKVGMELLGRVLDGLGNPIDGKGPILAKEEYPLQ 139

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
                PP + R R+      G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+   
Sbjct: 140 ---APPPPLTRPRIHDNLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEA 196

Query: 188 DKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+LVGERGREVR+FIE  LG+  LK+SVVVVATSD+  ++R    +T   IAEYF 
Sbjct: 197 DISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFR 256

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G S  EKG+
Sbjct: 257 DQGRRVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--EKGS 314

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L+SVSR+  +   
Sbjct: 315 ITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLSSVSRVMYEVVE 374

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               +    +  L+  ++E  D+  IG Y  G    +D A+ ++  I +FL Q   +++S
Sbjct: 375 KRHLEAAQEMRQLMAVYQEAEDLIHIGAYVKGSSPKIDAAIQKIDGINEFLCQGIYEVTS 434

Query: 427 EDVFQEITKKL 437
              ++E  ++L
Sbjct: 435 ---YEETEQRL 442


>gi|51894136|ref|YP_076827.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM
           14863]
 gi|51857825|dbj|BAD41983.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM
           14863]
          Length = 436

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 164/378 (43%), Positives = 231/378 (61%), Gaps = 7/378 (1%)

Query: 52  QGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALG 110
           QG       +V+    D + + P+G  + +  G D++   G  +        GRVI+ LG
Sbjct: 46  QGDGRRVPAEVVGFREDRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLG 105

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
            PID    L  G     I+   P  + RQR+ +    G+R +D    +  GQRIG+FAGS
Sbjct: 106 NPIDDKGPL-MGCGFRPILGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGS 164

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPI 229
           G+GKSTLL M AR+   D  +I+LVGERGREVREFIE  LG+  L++SVVVVATS++  +
Sbjct: 165 GVGKSTLLGMVARATAADCNVIALVGERGREVREFIEKDLGEEGLRRSVVVVATSEQPSL 224

Query: 230 LRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +R  A L A  IAEYF  + G +V+L++DS+TR AH+ RE+    GE P  RGY  SVF+
Sbjct: 225 VRIRAALMATAIAEYFRDAHGLDVILMMDSVTRLAHAQREVGLAVGEPPATRGYTPSVFA 284

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPR+LER G      G++T V +VLVDGD+ N+P+AD+VRSILDGH+VL+R LA  G Y
Sbjct: 285 MLPRVLERSG--TGPAGSVTGVYTVLVDGDDMNEPVADAVRSILDGHVVLSRKLANAGHY 342

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +DPL SVSR+     + + +K    L  L+  ++E  D+  IG Y+ G + ++D+A+ 
Sbjct: 343 PAIDPLQSVSRVMPDVTTPEHRKQAQRLRALLSAYQEAEDLIQIGAYQQGTNPLVDEALA 402

Query: 409 QVPIIYDFLKQSPSDLSS 426
           ++  I  FL Q P+D  S
Sbjct: 403 KMDQIKRFLIQ-PADQPS 419


>gi|332981434|ref|YP_004462875.1| type III secretion system ATPase, FliI/YscN [Mahella australiensis
           50-1 BON]
 gi|332699112|gb|AEE96053.1| type III secretion system ATPase, FliI/YscN [Mahella australiensis
           50-1 BON]
          Length = 435

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 158/372 (42%), Positives = 226/372 (60%), Gaps = 4/372 (1%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVIN 107
           ++ Q  +   + +V+    + + + P+G  + I  G  V         P+     GRV++
Sbjct: 46  ILSQDGSISAIAEVVGFREERMLLMPLGNVKGIGPGSTVIAMNTSLTVPAGPGLLGRVLD 105

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+P+D    L   D+  ++    P  + RQR+ +    GI+ ID      +GQR+GVF
Sbjct: 106 GLGRPMDSAGPLA-ADMYYDVEKDPPDPLTRQRICEPIVLGIKAIDGLLTCGYGQRMGVF 164

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227
           AGSG+GKSTL+ M AR    D  +I+L+GERGREV+EFIE  LG+ L +SV+VVATSD+ 
Sbjct: 165 AGSGVGKSTLMGMMARYASADVNVIALIGERGREVKEFIEKDLGEGLARSVLVVATSDQP 224

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R  A   A  IAEYF  +G NVLL++DS+TRFA + RE+    GE PV+RGY  SVF
Sbjct: 225 PLIRTKAAFVATAIAEYFRDQGCNVLLMMDSLTRFAMAQREVGLAIGEPPVSRGYTPSVF 284

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + +PRLLER G S  +KG+IT + +VLVDGD+ N+P+ D+ RSILDGHIVL+R LA    
Sbjct: 285 ATMPRLLERAGTS--DKGSITGIYTVLVDGDDFNEPVTDNARSILDGHIVLSRELANRNH 342

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YPP+D LASVSR+     +     L S +  ++  ++   D+  IG Y  G    +D A+
Sbjct: 343 YPPIDILASVSRVMPDVVTDRHMMLASQIKKIMAVYKGAEDLINIGAYVRGSSRDIDYAI 402

Query: 408 HQVPIIYDFLKQ 419
             +  I DFL+Q
Sbjct: 403 DHIDDINDFLQQ 414


>gi|226950072|ref|YP_002805163.1| flagellar protein export ATPase FliI [Clostridium botulinum A2 str.
           Kyoto]
 gi|226843623|gb|ACO86289.1| flagellar protein export ATPase FliI [Clostridium botulinum A2 str.
           Kyoto]
          Length = 438

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 239/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D A
Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +S +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---ISEQHSFEESTSILQ 433


>gi|205373376|ref|ZP_03226180.1| flagellum-specific ATP synthase [Bacillus coahuilensis m4-4]
          Length = 441

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/374 (41%), Positives = 228/374 (60%), Gaps = 7/374 (1%)

Query: 50  VHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
           + +GK+   +   +V+    D+V + P     +I+ G LV   G   ++       G V+
Sbjct: 47  IRKGKSGSQIIKAEVVGFQHDMVLLMPYSTISDIAPGSLVEGTGEALKVKIGKGLIGSVL 106

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           ++LG P+DG D L KG  S  + +  P  + R  + +  + G+R ID    +  GQR+G+
Sbjct: 107 DSLGNPLDGSD-LPKGLSSTSVENMPPNPLTRPTISEPLEVGVRAIDTMLTIGKGQRVGI 165

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225
           FAGSG+GKSTLL M AR+   D  II+L+GERGREVREFIE  LG + L +S+V+ ATSD
Sbjct: 166 FAGSGVGKSTLLGMIARNTKADINIIALIGERGREVREFIERDLGPEGLSRSIVIAATSD 225

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +  ++R     TA  IAEYF  +G NV+L++DS+TR A + RE+    GE P  +GY  S
Sbjct: 226 QPALMRIKGAFTATAIAEYFRDQGMNVMLMMDSVTRVAMAQREVGLAVGEPPATKGYTPS 285

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF+ LP+LLER G +    G ITA  +VLVDGD+ N+PIAD+ R ILDGHIVL+R +A  
Sbjct: 286 VFAILPKLLERTGTNHL--GTITAFYTVLVDGDDMNEPIADTTRGILDGHIVLDREIANR 343

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G+YP ++ L SVSRL +       K+  + + +L+  +E++ D+  IG Y+ G    +D+
Sbjct: 344 GQYPAINILKSVSRLMNHLAENGHKESANKIRNLLSTYEKSEDLINIGAYKKGTSPEIDE 403

Query: 406 AVHQVPIIYDFLKQ 419
           A+   P I  FLKQ
Sbjct: 404 AILYFPSILSFLKQ 417


>gi|154174001|ref|YP_001407433.1| flagellum-specific ATP synthase [Campylobacter curvus 525.92]
 gi|112803229|gb|EAU00573.1| flagellar protein export ATPase FliI [Campylobacter curvus 525.92]
          Length = 435

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/437 (39%), Positives = 249/437 (56%), Gaps = 10/437 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQ 61
           NLE L    +    +L    G I+ IT+    +T L     +GD V  V + K+ + LG 
Sbjct: 2   NLERLNLKLKSKDLSLSNTFGIITKITATNIEITGLCP--SIGDIVRIVAKDKSKNGLGM 59

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V +I     +I P G  E   +GD V+   +   I       GRV++   KP+DG  ++ 
Sbjct: 60  VTQIKSGGAFISPFGFVEGFRIGDFVYASDQGMNIPVGRNLLGRVVDPFMKPVDGKGAIE 119

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +  M IM     AM R  + + F  GI+ ID       GQ++G+FAGSG+GKSTL+ M
Sbjct: 120 TSEY-MPIMKAPIDAMKRGLINEPFSVGIKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGM 178

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             ++      +++L+GERGREV EFIE  LG NL  +V+VVATSD+S ++RK     A++
Sbjct: 179 IVKNTLAPIKVVALIGERGREVPEFIEKNLGGNLDGTVIVVATSDDSSLMRKYGAFCAMS 238

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF ++G++VL I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  
Sbjct: 239 VAEYFKNQGNDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-K 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E+ KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+
Sbjct: 298 EEGKGSITAFFTVLVEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRV 357

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S + ++       L    +E   +  IG Y+ G D  LD A+ +   + +FLKQ 
Sbjct: 358 MGDVISNEHRQNAMKFKRLYSLLKENEVLLRIGAYQRGSDKELDLAISKKEYMENFLKQD 417

Query: 421 PSDLSSEDVFQEITKKL 437
             ++     F+EI   L
Sbjct: 418 AQEVYK---FEEIQSLL 431


>gi|148380617|ref|YP_001255158.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           ATCC 3502]
 gi|148290101|emb|CAL84220.1| flagellum-specific ATP synthase [Clostridium botulinum A str. ATCC
           3502]
          Length = 438

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 239/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D A
Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +S +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---ISEQHSFEESTSILQ 433


>gi|83646016|ref|YP_434451.1| type III secretion system ATPase [Hahella chejuensis KCTC 2396]
 gi|83634059|gb|ABC30026.1| Flagellar biosynthesis/type III secretory pathway ATPase [Hahella
           chejuensis KCTC 2396]
          Length = 448

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/363 (44%), Positives = 222/363 (61%), Gaps = 5/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +VI  +     + P+   E +S    V   GR   I  S    GRV++ LG PID  +
Sbjct: 68  LAEVIGFSRQEALLTPLSEMEGLSAHTEVIPTGRSHEIQISEGILGRVLDGLGAPIDDGE 127

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G +   I+S  P  + R+ VE    TG+R ID       GQR+GVFA +G+GKSTL
Sbjct: 128 PL-TGGVPYPIISASPNPLTRRLVETPMTTGVRAIDGMLTCGEGQRMGVFAAAGVGKSTL 186

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           LSM  R    D V+I L+GERGREVR FIE  LG + ++++VVV ATSD   + R  A  
Sbjct: 187 LSMITRHTDADIVVIGLIGERGREVRGFIERDLGAEGMQRAVVVAATSDRPAMERVKAGY 246

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F  +G  VLL++DS+TRFA ++REI   +GE P  RG+P +VF+ LP+LLER
Sbjct: 247 VATAIAEHFRDQGKRVLLLIDSVTRFARALREIGLAAGEPPARRGFPPTVFATLPKLLER 306

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            GP  K  G I+A+ +VLV+GD+  +P+AD VRSILDGHIVL+R+LAE G +P VD LAS
Sbjct: 307 AGPGAK--GAISALYTVLVEGDDMTEPVADEVRSILDGHIVLSRALAESGHFPAVDILAS 364

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            SRL +   + ++ +    L  L+ R++E   +  IG Y+PG D + D A+  +  I  F
Sbjct: 365 SSRLMNDIATPEQLQQARRLRQLLARYKEIELLVRIGEYQPGTDPLADAAIKAIEPINQF 424

Query: 417 LKQ 419
           L+Q
Sbjct: 425 LRQ 427


>gi|118474658|ref|YP_892815.1| flagellum-specific ATP synthase [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885883|ref|ZP_06009922.1| flagellum-specific ATP synthase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|118413884|gb|ABK82304.1| flagellar protein export ATPase FliI [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 434

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 159/403 (39%), Positives = 235/403 (58%), Gaps = 7/403 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G I+ IT+    +T L     +GD V  +    N + LG V  +N     + P G  E  
Sbjct: 21  GIITKITTNNMEITGLRP--SIGDIVRIISIDGNKNELGMVTGLNQTGASVSPFGFVEGF 78

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +GD V+   +   I       GRV++    P D   ++ +    + IM    PAM R  
Sbjct: 79  KIGDRVYASDQGMSIPVGESLLGRVVDPFMNPKDSKGAI-EATTYVPIMQMPIPAMKRGL 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + + F  G++ ID       GQ++G+FAGSG+GKSTL+ M  ++      +++L+GERGR
Sbjct: 138 INEPFSVGVKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNSVAPIKVVALIGERGR 197

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EV EFIE  L  +L  +V++VATSD+SP++RK     A+++AEYF S G +VL I+DS+T
Sbjct: 198 EVPEFIEKNLNGDLSNTVIIVATSDDSPLMRKYGAFCAMSVAEYFKSSGRDVLFIMDSVT 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI    GE P ++GYP SV + LP+L+ER G  E+ KG+ITA  +VLV+GD+ 
Sbjct: 258 RFAMAQREIGLALGEPPTSKGYPPSVLTILPQLMERAG-KEEGKGSITAFFTVLVEGDDM 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+     S + +   S    L 
Sbjct: 317 SDPIADQSRSILDGHIVLSRELTDFGIYPPINILNSASRVMGDVTSKEHRANASKFKRLF 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              +E   +  IG Y+ G+D  LD A+ +   + +F+KQ+P++
Sbjct: 377 SMLKENEVLIRIGAYQKGIDKELDSAISKKGFMEEFMKQNPTE 419


>gi|239628989|ref|ZP_04672020.1| ATPase FliI/YscN [Clostridiales bacterium 1_7_47_FAA]
 gi|239519135|gb|EEQ59001.1| ATPase FliI/YscN [Clostridiales bacterium 1_7_47FAA]
          Length = 434

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 164/372 (44%), Positives = 237/372 (63%), Gaps = 9/372 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V + P    E I  G  V + G R RI+ S    GR ++A+G PIDG   L
Sbjct: 57  EVVGFRENRVLLMPYEEMEGIGYGSAVRNTGERLRIAVSNQLIGRTVDAMGMPIDG---L 113

Query: 120 GK-GDLSM-EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           G   D+S   I  K    M R R++   + G++ ID    +  GQR+G+FAGSG+GKSTL
Sbjct: 114 GPVDDVSYYPITGKPSNPMERPRIDTIIQMGVKAIDGLLTVGKGQRMGIFAGSGVGKSTL 173

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           + M A++   D  +I+LVGER REV EFI   LG+  LK+SV+VVATS +S ++R    +
Sbjct: 174 MGMIAKNVKADVNVIALVGERSREVVEFINRDLGEEGLKRSVLVVATSSQSAMMRSKCTM 233

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA TIAEYF  +G +VLL++DS+TRFA + RE+  + GE PVARGY  S++SELP+LLER
Sbjct: 234 TATTIAEYFKDQGMDVLLMMDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLER 293

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G    E+G+IT + +VLV+GD+ N+PI+D+VR I+DGHI+L+R +A + RYP +D L+S
Sbjct: 294 SG--NFEEGSITGIYTVLVEGDDANEPISDTVRGIIDGHIMLSRKVAAKNRYPAIDILSS 351

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSRL +   + + K+    L  L+  +E   D+  IG Y+ G +  LD+A+ ++  IY F
Sbjct: 352 VSRLMNDIVTPEHKEAAGKLRRLLAVYESNSDLVSIGAYKKGTNPELDEALERIDSIYGF 411

Query: 417 LKQSPSDLSSED 428
           L+Q   +  S D
Sbjct: 412 LQQKTDESFSLD 423


>gi|302338080|ref|YP_003803286.1| flagellar protein export ATPase FliI [Spirochaeta smaragdinae DSM
           11293]
 gi|301635265|gb|ADK80692.1| flagellar protein export ATPase FliI [Spirochaeta smaragdinae DSM
           11293]
          Length = 453

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/323 (46%), Positives = 213/323 (65%), Gaps = 4/323 (1%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GRV++A+G+PIDG   +G G  S+  ++  P  + R+ +++   TG+R ID  TP
Sbjct: 96  SEKMLGRVLDAMGRPIDGKGPVG-GAESVSTVNTPPNVLTRKPIKRQMVTGVRAIDTMTP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           +  GQRIG+F+GSG+GKSTLL M AR+   D  +I+L+GERGREV+EFIE  LG + L++
Sbjct: 155 IGKGQRIGIFSGSGVGKSTLLGMIARNTSADINVIALIGERGREVQEFIEYDLGPEGLER 214

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           S++VV+T D +P+ R      A TIAE+F  KG +V+L+ DS+TRFA + REI    GE 
Sbjct: 215 SILVVSTGDTAPLSRLRGAFVATTIAEHFRDKGADVMLLFDSVTRFARAQREIGLAVGEP 274

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  RGY  SVFS LP+LLER G  E+  G IT   ++LV+GD+ ++P+AD+VR ILDGHI
Sbjct: 275 PATRGYTPSVFSTLPKLLERCGTGER--GTITGFYTILVEGDDMDEPVADAVRGILDGHI 332

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LA+  RYP +D LAS+SRL  K  S   +K    L  L+  + +  D+  +G Y 
Sbjct: 333 VLSRKLAQAYRYPAIDVLASLSRLGTKITSPLVQKASGKLRSLLAVYTDAEDLINVGAYA 392

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G +  +D+A+ ++  I +FL Q
Sbjct: 393 EGSNSAIDEAIEKIDAIREFLGQ 415


>gi|269796395|ref|YP_003315850.1| type III secretion system ATPase, FliI/YscN [Sanguibacter keddieii
           DSM 10542]
 gi|269098580|gb|ACZ23016.1| type III secretion system ATPase, FliI/YscN [Sanguibacter keddieii
           DSM 10542]
          Length = 459

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 159/384 (41%), Positives = 231/384 (60%), Gaps = 7/384 (1%)

Query: 38  CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRIS 96
            L   + LG+    +G ++  L +V+ +        P+G    I  G       G  ++ 
Sbjct: 55  ALGDVLALGE--TGRGSDASMLAEVVAVTGSTARCMPLGAMRGIRPGLQARTTGGALQVP 112

Query: 97  PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
             +   GRV++ LG+P+DG   L  G  ++ +  + P  + RQRV +    G+R +D  T
Sbjct: 113 VGSGLLGRVVDGLGRPLDGRGPL-VGTTTVPLDGRAPHPLERQRVAQPLTLGVRTLDTLT 171

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
            +  GQR+G+FAGSG+GKSTLLSM AR       +I+LVGERGREVREF+ED LG + L 
Sbjct: 172 TVGRGQRMGLFAGSGVGKSTLLSMVARGTDAAVSVIALVGERGREVREFLEDDLGPEGLA 231

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVVVVATSDE  ++R  A   A  IAE F   G++V+L++DS+TR A + REI  + GE
Sbjct: 232 RSVVVVATSDEPALVRLRAAFVATRIAESFRESGEDVVLMMDSLTRVAMAQREIGLSVGE 291

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  RGYP S FS L  LLER G S   +G++T + +VLVDGD+HN+PIAD+ RSILDGH
Sbjct: 292 PPATRGYPPSTFSVLAELLERAGTS--ARGSVTGIYTVLVDGDDHNEPIADAARSILDGH 349

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R LA  G +P +D L S+SR+A +  SA ++   ++L  ++      +D+  +G Y
Sbjct: 350 VVLDRRLAVAGHFPSIDALGSISRVATRVTSAAQRADATALRKVMSARRAVQDLVDVGAY 409

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G + ++D A+     I  FL+Q
Sbjct: 410 VQGSNPLVDAALAHQGAIDAFLQQ 433


>gi|170690593|ref|ZP_02881760.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia graminis C4D1M]
 gi|170145028|gb|EDT13189.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia graminis C4D1M]
          Length = 464

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 165/420 (39%), Positives = 244/420 (58%), Gaps = 13/420 (3%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIV 70
           E  S   + + G +  +      V  L   V LG+    +  N + L   +VI    D+ 
Sbjct: 38  EILSTASIARTGKVLEVIGTLVKVAGLD--VTLGELCELRAANGELLQHAEVIGFTRDVA 95

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME-- 127
            + P     +IS    V   GR    P      GRVI++LG+PIDG   LG  D   E  
Sbjct: 96  LLSPFSRLADISRSTRVVGLGRSLTVPVGDALLGRVIDSLGEPIDG---LGPLDTIEERP 152

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + +  P  M+R+ ++    TG+R++D    L  GQR+G+FA +G+GKSTLL MFAR    
Sbjct: 153 VFANPPSPMSRRMIDTPLATGVRIVDGMMTLAEGQRMGIFAPAGVGKSTLLGMFARGAQC 212

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREVREF+E  LG + + +S+VV ATSD S I R  A   A  IAE+F 
Sbjct: 213 DVTVIALIGERGREVREFVELILGPEGMARSIVVCATSDRSSIERAKAAYVATAIAEHFR 272

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G    E G+
Sbjct: 273 DRGQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAG--MGEHGS 330

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ +VL + ++ NDPIA+ VR I+DGH++L+R +A + +YP +D LAS+SR+  +  +
Sbjct: 331 ITALYTVLAEDESGNDPIAEEVRGIVDGHMILSREIAAKNQYPAIDVLASLSRVMPQVMT 390

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            D  +    L  L+ +  E   +  IG Y+PG + + D+A+ ++  I  F  Q+  +L++
Sbjct: 391 PDYVRAAGRLRELLAKHREVEMLLQIGEYQPGGNPLADEAIRKIDAIRAFFNQATHELAA 450


>gi|229918630|ref|YP_002887276.1| ATPase, FliI/YscN family [Exiguobacterium sp. AT1b]
 gi|229470059|gb|ACQ71831.1| ATPase, FliI/YscN family [Exiguobacterium sp. AT1b]
          Length = 439

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 154/363 (42%), Positives = 229/363 (63%), Gaps = 8/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  N + V + P G   +I+ G LV   G+    P      G+V++ LG+P+ G+  +
Sbjct: 60  EVVGFNEERVLLMPYGETTQIAPGCLVKGTGKMLQVPVGEELIGQVLDGLGRPLSGERLV 119

Query: 120 -GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
            GK     ++  K P  +NR R+     TG+R+ID    +  GQR+G+FAGSG+GKSTLL
Sbjct: 120 TGK---RYDVQRKPPNPLNRPRILDALSTGVRMIDGLLTVGKGQRVGLFAGSGVGKSTLL 176

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M A+    D  +I+L+GERGREV+EFIE  LG + + +SVV+VATSD+ P++R     T
Sbjct: 177 GMIAKRSSADINVIALIGERGREVKEFIEKELGPEGMARSVVIVATSDQPPLVRLKGAYT 236

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  V+L++DS+TRFA + REI   +GE P ++GY  SVF+ LP+LLER 
Sbjct: 237 ATAIAEYFRDQGKEVVLMMDSVTRFAMAQREIGLATGEPPTSKGYTPSVFAMLPQLLERS 296

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G +    G+ITA  +VLVDGD+ N+PIAD+VR ILDGH V++R+LA  G++P +  L S+
Sbjct: 297 GTAAT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHFVMDRALANRGQFPAIHVLKSI 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+ ++  S + K+   +    +  + +  D+  IG Y+ G +  +D AV + P +  FL
Sbjct: 355 SRVMNQIASPEHKEAAQTFRSWLATYIDAEDLINIGAYKKGTNPAIDTAVDKYPYLLTFL 414

Query: 418 KQS 420
           KQS
Sbjct: 415 KQS 417


>gi|296330838|ref|ZP_06873313.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674356|ref|YP_003866028.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151843|gb|EFG92717.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412600|gb|ADM37719.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 438

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 9/380 (2%)

Query: 43  VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100
           VCL   +  +G++ + +  +V+    + + + P      I+ G +V   G   R+   A 
Sbjct: 42  VCL---IYAKGQSGNVIKAEVVGFQEESILLMPYLEAASIAPGSIVEATGESLRVKVGAG 98

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             G+VI+A G+P+DG   L KG   +      P  M R  + +    G+R ID    +  
Sbjct: 99  LIGQVIDAFGEPLDGK-LLPKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGK 157

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGERGREVREFIE  LGD  LK+S+V
Sbjct: 158 GQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGDEGLKRSIV 217

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+  ++R  A  TA  IAEYF  KG NV+ ++DS+TR A + REI   +GE P  
Sbjct: 218 VVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTT 277

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GY  SVF+ LPRLLER G +E   G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+
Sbjct: 278 KGYTPSVFAILPRLLERTGANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLD 335

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA +G++P V+ L S+SR+     +       +    L+  ++ + D+  IG Y+ G 
Sbjct: 336 RALANKGQFPAVNILKSISRVMSNISTRQHLDAANKFRELLSTYQNSEDLINIGAYKRGS 395

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
              +D+A+   P +  FLKQ
Sbjct: 396 SREIDEAIQFYPQLIQFLKQ 415


>gi|254474795|ref|ZP_05088181.1| flagellum-specific ATP synthase [Ruegeria sp. R11]
 gi|214029038|gb|EEB69873.1| flagellum-specific ATP synthase [Ruegeria sp. R11]
          Length = 447

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 164/425 (38%), Positives = 251/425 (59%), Gaps = 4/425 (0%)

Query: 2   QKNLETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           Q  +  +  L +D + K L    G ++ I+     V+ L     +GD +V +    D L 
Sbjct: 4   QNMISAINALTQDLANKRLSAAVGRVTEISGGAIAVSGLDGQARIGDRLVLRRGGKDPLQ 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+RI+   + + P    + +++GD V        +P+  W GRVI+  G P+DG   +
Sbjct: 64  GEVMRISGREISMLPDTAPDRVAVGDPVLLHPTPEFAPADSWIGRVIDPFGAPLDGRPMM 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G+ + ++M+  P A  R+ + +   TG+ V +   P+  GQR+G+FAGSG+GKSTLL+
Sbjct: 124 -RGETARDLMAAPPKAAERRPMGERLATGLAVFNTILPIVKGQRVGLFAGSGVGKSTLLA 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+ + LG D +K++VVV ATSD+S ++R+    +A
Sbjct: 183 TLAQNMEADVVVMALIGERGREVNHFVNEVLGPDGMKRAVVVAATSDQSALVRRRCAWSA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + +AE+F  +G NVL + DS+TRFA + REIA  SGE P  RGYP SV   +  L ER G
Sbjct: 243 MAVAEHFRDQGKNVLFLADSVTRFAEAHREIAVASGEAPALRGYPPSVTPLITGLCERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P    +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD   SVS
Sbjct: 303 PGSDGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A + +E   +  +   +  +E++  +   G Y  G D+ LD+AV   P +  F  
Sbjct: 363 RSLPAAATEEENAAILDVRKYLGAYEQSEVMIRAGLYSEGNDVTLDQAVKLWPELDSFFG 422

Query: 419 QSPSD 423
           +S  D
Sbjct: 423 KSDPD 427


>gi|225375320|ref|ZP_03752541.1| hypothetical protein ROSEINA2194_00945 [Roseburia inulinivorans DSM
           16841]
 gi|225212809|gb|EEG95163.1| hypothetical protein ROSEINA2194_00945 [Roseburia inulinivorans DSM
           16841]
          Length = 436

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 150/343 (43%), Positives = 224/343 (65%), Gaps = 6/343 (1%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E I +G +V + G    +S      G  ++ +G+P D D    +      + ++ P  M+
Sbjct: 77  EGIGVGCIVENTGHPLSVSVGNELLGHTLDGIGRPTDIDKL--ETPYEYPVDAQPPDPMS 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +    G++ +D    +  GQRIG+FAGSG+GKSTLL MFAR+   D  +I+L+GE
Sbjct: 135 RKIISEVLPLGVKAVDGLITVGKGQRIGIFAGSGVGKSTLLGMFARNTKADINVIALIGE 194

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREF+E  LG+  +K+S+VVVATSD+  ++RK A +TA +IAEYF  +G +VLL++
Sbjct: 195 RGREVREFVERDLGEEGMKRSIVVVATSDKPALIRKKAAMTATSIAEYFRDQGKDVLLMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRF+ + REI   SGE PV RGYP SV+SE+P+LLER G S  +KG+IT + +VLVD
Sbjct: 255 DSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGTS--DKGSITGLYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI D+ RSILDGHI+L+R L  +  YP +D L S+SR+     + + K+L   L
Sbjct: 313 GDDFNEPITDTARSILDGHIMLSRKLGHKNHYPAIDILQSISRVMSSIATPEHKELAGRL 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +++  + E  D+  IG Y+ G +  +D A+ ++  + DFL Q
Sbjct: 373 KNVLATYNEAEDLINIGAYKSGSNRNIDYAIQKIDAVNDFLMQ 415


>gi|160939663|ref|ZP_02087011.1| hypothetical protein CLOBOL_04555 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437454|gb|EDP15218.1| hypothetical protein CLOBOL_04555 [Clostridium bolteae ATCC
           BAA-613]
          Length = 434

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 175/420 (41%), Positives = 253/420 (60%), Gaps = 18/420 (4%)

Query: 25  YISSITSVYYTVTCLSQYVC-LGDF----VVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           Y+  I  +  T    +   C LGD     VV  G  S  + +V+    + V + P G  E
Sbjct: 18  YLGKIDKIVGTTVESTGPACRLGDVCTIDVVEGG--SPVMAEVVGFRENKVLLMPYGETE 75

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPP-AM 136
            I  G  V + G R  I+ S    GR ++A+G PID    LG   D+S   ++  P   M
Sbjct: 76  GIGYGSAVRNTGERLHIAVSNHLIGRTVDAMGNPID---DLGPVEDVSYYSITGRPSNPM 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R++   + G++ ID    +  GQR+G+FAGSG+GKSTL+ M A++   D  +I+LVG
Sbjct: 133 TRPRIDTIIQMGVKAIDGLMTVGKGQRMGIFAGSGVGKSTLMGMIAKNVKADVNVIALVG 192

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER REV EFI   LG+  L++SV+VVATS++S ++R    +TA TIAEYF  +G +VLL+
Sbjct: 193 ERSREVVEFIHRDLGEEGLRRSVLVVATSNQSAMMRSKCTMTATTIAEYFKDQGMDVLLM 252

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + RE+  + GE PVARGY  S++SELP+LLER G    E+G+IT + +VLV
Sbjct: 253 MDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLERSG--NFEEGSITGIYTVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+PI+D+VR I+DGHI+L+R +A    YP +D L+SVSRL +   + + K     
Sbjct: 311 EGDDANEPISDTVRGIIDGHIMLSRKVAARNHYPAIDILSSVSRLMNDIVTPEHKAAAGK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS--EDVFQEI 433
           L  L+  +E  RD+  IG Y+ G +  LD A+ ++  IY FL+Q   +  S  E V Q I
Sbjct: 371 LRRLLSVYESNRDLVSIGAYKKGTNPELDDALERIDRIYGFLQQKTDESFSLDESVIQMI 430


>gi|89072274|ref|ZP_01158853.1| putative flagellum-specific ATP synthase [Photobacterium sp. SKA34]
 gi|89051806|gb|EAR57258.1| putative flagellum-specific ATP synthase [Photobacterium sp. SKA34]
          Length = 449

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/362 (42%), Positives = 223/362 (61%), Gaps = 5/362 (1%)

Query: 61  QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + +I Y+ PV  +G   +   ++   G   ++ S  W GRV+N LG+P+D    L
Sbjct: 61  QVVGFDHNIAYLMPVRQLGGLYAGAKVIPIQGGSTVNVSHKWIGRVVNGLGEPLDNGLPL 120

Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             G+ LS+E     P  M RQ VE     GI+ I+    +  GQRIG+ AGSG+GKS L+
Sbjct: 121 QGGECLSLEPKPINP--MKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLM 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237
            M  +    D +++ L+GERGREVREFIE  LG+   K++V++ A +DESP++R  A   
Sbjct: 179 GMITKYTAADIIVVGLIGERGREVREFIERSLGEEGRKRAVIIAAPADESPLMRLRATKL 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AEYF  +G +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER 
Sbjct: 239 CHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E   G++TA+ +VL +GD+  DP+ DS R+ILDGHIVL+R+LAE+G YP +D  AS+
Sbjct: 299 GNGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASI 358

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR            + +    L   +++ +++  +GGY+ G D  LD+AV   P +  FL
Sbjct: 359 SRCMSNCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFL 418

Query: 418 KQ 419
           +Q
Sbjct: 419 QQ 420


>gi|188586020|ref|YP_001917565.1| type III secretion system ATPase, FliI/YscN [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350707|gb|ACB84977.1| type III secretion system ATPase, FliI/YscN [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 439

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 162/438 (36%), Positives = 260/438 (59%), Gaps = 13/438 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVY-YTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           +L+ L+Q   + S  L +QG     +T V   TV        +GD  + +  + +   +V
Sbjct: 7   DLDKLSQTIRN-SNTLPLQG----EVTRVVGLTVEARGPGAKIGDLCLIRSDDQEIECEV 61

Query: 63  IRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  N   + + P+G    ++ G+ ++       +       GRV++ LG+P+DG   L  
Sbjct: 62  VGFNDGKILLMPLGNLNNVAPGNKVITSRENLSVPVGPGLVGRVLDGLGRPMDGKGPLTN 121

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 + +  P  ++R R++K  +TGI+ ID    +  GQR+G+F+GSG+GKSTLL M 
Sbjct: 122 TKCRYPMENTPPAPLDRSRIQKPIQTGIKAIDGVLTIGKGQRMGIFSGSGVGKSTLLGMI 181

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+      +I L+GERGREVREFIE  LG + L++SV+VVATSD+  +LR    +TA  
Sbjct: 182 ARNTSASVNVIGLIGERGREVREFIEKDLGEEGLQRSVIVVATSDQPALLRIKGAMTATA 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF   G++V+L++DS+TRFA + RE+   +GE P  RG+P SVF+ LP+LLER G S
Sbjct: 242 IAEYFRDCGNDVMLMMDSVTRFATAKREVGLATGEPPATRGFPPSVFAMLPQLLERSGTS 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG++T + +VLVDGD+ ++P++D+VR +LDGHIVL+R LA +  YP +D L S+SR+
Sbjct: 302 --DKGSVTGLYTVLVDGDDMDEPVSDTVRGVLDGHIVLSRKLAMQNHYPAIDILQSISRV 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                    +K  + ++  +  +EE RD+  IG Y+ G +  +D A+  +  + +FL+Q 
Sbjct: 360 MVDITDTQHQKAAAKISSALAAYEEARDLIEIGAYKKGSNPKVDWAMELIDDLNEFLRQ- 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +++ +    E   KL+
Sbjct: 419 --EITEKTTLDETINKLK 434


>gi|229544396|ref|ZP_04433454.1| ATPase, FliI/YscN family [Bacillus coagulans 36D1]
 gi|229324881|gb|EEN90558.1| ATPase, FliI/YscN family [Bacillus coagulans 36D1]
          Length = 441

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 159/353 (45%), Positives = 217/353 (61%), Gaps = 5/353 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P    +EIS G LV   G+  R+       G+VI+ LG P+D    L  G   + I
Sbjct: 68  VILMPYTNIQEISPGSLVEATGKPMRVKAGPRLLGKVIDPLGVPLD-HSPLPAGLKPIPI 126

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  + R  + +  + G+R ID    +  GQRIG+FAGSG+GKSTLL M AR+   D
Sbjct: 127 DRTPPNPLKRPPIREPIELGVRAIDSLLTVGKGQRIGIFAGSGVGKSTLLGMIARNTNAD 186

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREFIE  LG + LKKS+VVVATSD+  ++R     TA  IAEYF  
Sbjct: 187 LNVIALIGERGREVREFIEQDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAIAEYFRD 246

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G NV+ ++DS+TR A + RE+   +GE P  +GY  SVF+ LP+LLER G    E G I
Sbjct: 247 QGLNVMFMMDSVTRVAMAQREVGLATGEPPATKGYTPSVFAILPKLLERTG--TNESGTI 304

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLVDGD+ N+PIAD+VR ILDGH VL+R LA +G+YP ++ L SVSRL  +  S 
Sbjct: 305 TGIYTVLVDGDDLNEPIADTVRGILDGHFVLDRDLANKGQYPAINILKSVSRLMSQLASP 364

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             KK    +   +  +  + D+  IG Y+PG    +D+A+ + P I  F+KQS
Sbjct: 365 AHKKAAEKIREQLSTYLNSEDLINIGAYKPGASKEIDEAIERYPKIVSFIKQS 417


>gi|327478790|gb|AEA82100.1| FliI/YscN family ATPase [Pseudomonas stutzeri DSM 4166]
          Length = 444

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 161/375 (42%), Positives = 219/375 (58%), Gaps = 9/375 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVI 106
           V QG  S    QV+  N DI Y+ P      ++ G  VF      +  I  S  W GRV+
Sbjct: 51  VEQGDGSMLEAQVVGFNRDITYLMPFKKPVGLTAGSRVFPAPDDAKLHIDES--WLGRVV 108

Query: 107 NALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           N LG+P+D    LG  D L  E+ S  P  + R+ V +    G+R I+    L  GQR+G
Sbjct: 109 NGLGEPLDELGKLGGRDPLPTELPSVNP--LKRKPVSEALDVGVRAINATLTLGKGQRVG 166

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATS 224
           +FAGSG+GKS LL M  R    D V++ L+GERGREV+EF+   LG+  LKK+VVVVA +
Sbjct: 167 LFAGSGVGKSVLLGMITRQTKADVVVVGLIGERGREVQEFLLHSLGEEGLKKAVVVVAPA 226

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +ESP++R  A     +IA YF  +G +VLL++DS+TR+A + REIA   GE P  +GYP 
Sbjct: 227 NESPLMRLKATELCHSIAAYFRDQGHDVLLLVDSLTRYAMAQREIALALGEPPATKGYPP 286

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           SVF  LP L+E  G    + G+++A+ +VL +GD+  DPI D  R+ILDGHIVL+R LAE
Sbjct: 287 SVFGMLPELVESAGNGASDNGSLSAIYTVLAEGDDQQDPIVDCARAILDGHIVLSRRLAE 346

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G YP +D  ASVSR   +            L      FE+ +++  +GGY PG D+  D
Sbjct: 347 AGHYPAIDVCASVSRCMSQVGQPAHLGAARQLKECYSTFEKIKELIPLGGYTPGADIKTD 406

Query: 405 KAVHQVPIIYDFLKQ 419
           +AV   P I  FL+Q
Sbjct: 407 RAVQLAPTIERFLRQ 421


>gi|237752940|ref|ZP_04583420.1| flagellum-specific ATP synthase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375207|gb|EEO25298.1| flagellum-specific ATP synthase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 432

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 159/394 (40%), Positives = 237/394 (60%), Gaps = 6/394 (1%)

Query: 45  LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCG 103
           +GD V    +++ ++G V  +  D   I P    E   +GD V+   R  +I       G
Sbjct: 39  IGDIVRILSEDNQSMGMVTALEKDCFKITPFSFIEGTKVGDKVYLNTRGLQIPVGLEILG 98

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RVIN LG+ IDG  ++ +   +M I+     AM R  + + F  G++ ID       GQ+
Sbjct: 99  RVINPLGEAIDGKGAI-RAQGAMPIIRAPIEAMKRGMINEVFSVGVKSIDGLLTCGKGQK 157

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223
           +G+FAGSG+GKSTL+ M  R       +I+L+GERGREV EF+E  LG +L  +V++VAT
Sbjct: 158 LGIFAGSGVGKSTLMGMIVRGATAKIKVIALIGERGREVPEFVEKNLGGDLTNTVLIVAT 217

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           SD+SP++RK     A+++AEYF +KG++VL ++DS+TRFA + REI    GE P ++GYP
Sbjct: 218 SDDSPLMRKYGAFAAMSVAEYFKAKGEDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYP 277

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SV + LP+L+ER G  E+ +G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+RSL 
Sbjct: 278 PSVLTLLPQLMERAG-KEEGQGSITAYFTVLVEGDDMSDPIADQSRSILDGHIVLDRSLT 336

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           + G YPP++ L S SRL     + +  +       L    +E   +  IG Y+ G D  L
Sbjct: 337 DFGIYPPINVLNSASRLMGDVANKEHIEAARKFRRLYAMLKENEVLIRIGAYQAGSDKDL 396

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           D+A+ +  ++ ++LKQ   D      ++E  +KL
Sbjct: 397 DEAISKKGVMEEYLKQ---DCDVAITYEESVQKL 427


>gi|194015095|ref|ZP_03053712.1| flagellar protein export ATPase FliI [Bacillus pumilus ATCC 7061]
 gi|194014121|gb|EDW23686.1| flagellar protein export ATPase FliI [Bacillus pumilus ATCC 7061]
          Length = 438

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 9/380 (2%)

Query: 43  VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100
           VCL   +  +G+  D +  +V+    + + + P      IS G LV   G   ++     
Sbjct: 42  VCL---IHKKGRKHDPIKAEVVGFRDENILLMPYVEASNISPGSLVEATGESLKVKVGTG 98

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             G V++A G+P+DG   L KG   +      P  M+R  + +    G+RVID    +  
Sbjct: 99  LIGEVVDAFGEPLDGS-MLPKGLAPVSTDQSPPNPMDRPPIREKMGVGVRVIDSLLTVGT 157

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGERGREVREFIE  LG + LK+S+V
Sbjct: 158 GQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGTEGLKRSIV 217

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+  + R  A  TA  IAEYF  +G NV+ ++DS+TR A + REI   +GE P  
Sbjct: 218 VVATSDQPALTRMKAAYTATAIAEYFRDRGKNVMFMMDSVTRVAMAQREIGLATGEPPTT 277

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GY  SVF+ LP+LLER G ++   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+
Sbjct: 278 KGYTPSVFAILPKLLERTGTNQL--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLD 335

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA +G++P V+ L S+SR+     S D K+  +    L+  ++   D+  IG Y+ G 
Sbjct: 336 RALANKGQFPAVNILKSISRVMSNIASHDHKEAANRFRQLLSTYQNAEDLINIGAYKKGS 395

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
              +D A+   P +  FLKQ
Sbjct: 396 SKDIDDAMQAYPHLISFLKQ 415


>gi|56695106|ref|YP_165453.1| H+-transporting two-sector ATPase, flagellum-specific [Ruegeria
           pomeroyi DSS-3]
 gi|56676843|gb|AAV93509.1| H+-transporting two-sector ATPase, flagellum-specific [Ruegeria
           pomeroyi DSS-3]
          Length = 445

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 160/416 (38%), Positives = 246/416 (59%), Gaps = 3/416 (0%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIR 64
           + LA  AE  S +LV   G ++ +      +  L++   +GD V  +     +LG +V++
Sbjct: 5   DPLALKAEFDSLSLVRHVGRVTGVAGGVIQIQGLARQAQIGDRVELKRNFGPSLGGEVLQ 64

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           +    + + P    E +SLG+ V        +P   W GRV++  G+P+DG   L +G  
Sbjct: 65  VEGSTINMLPDSAPEGVSLGNRVVLHPIPGFAPGRHWLGRVVDPFGRPLDGR-PLMRGSK 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           + ++M   PPA+ R+ + +   TG+  ++   P+  GQR+G+FAGSG+GKS+LL+  A+S
Sbjct: 124 ARDLMRAPPPAVQRKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSLLATLAKS 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D V+++L+GERGREV EF+   LG + L +SV+V ATSD+S ++R+     A+T+AE
Sbjct: 184 MQADAVVVALIGERGREVNEFVAKALGPEGLARSVIVAATSDQSALVRRRCAWAAMTVAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
               +G NVL + DSITRFA + REI+   GE P  RGYP SV   +  L ER GP  ++
Sbjct: 244 SLRDEGLNVLYLADSITRFAEAHREISAAMGEAPALRGYPPSVTPLITGLCERAGPGTEK 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT V SVLV G + ++P+AD +R +LDGHIVLNR +AE GR+P +D   SVSR    
Sbjct: 304 QGDITGVFSVLVAGSDMDEPVADILRGVLDGHIVLNREIAERGRFPAIDISRSVSRSLPD 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           A + ++  L+     LI  +E++  +   G Y  G D +LD+AV   P +  FL +
Sbjct: 364 AATPEQNALIGEARRLIGAYEQSEVMIKAGLYSEGADPLLDQAVRVWPELDAFLAR 419


>gi|157692303|ref|YP_001486765.1| flagellum-specific ATP synthase [Bacillus pumilus SAFR-032]
 gi|157681061|gb|ABV62205.1| flagellum-specific ATP synthase [Bacillus pumilus SAFR-032]
          Length = 438

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 9/380 (2%)

Query: 43  VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100
           VCL   +  +G+  D +  +V+    + + + P      IS G LV   G   ++     
Sbjct: 42  VCL---IHKKGRKHDPIKAEVVGFRDEHILLMPYVEASNISPGSLVEATGESLKVKVGTG 98

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             G V++A G+P+DG   L KG   +      P  M+R  + +    G+RVID    +  
Sbjct: 99  LIGEVVDAFGEPLDGS-MLPKGLAPVSTDQSPPNPMDRPPIREKMGVGVRVIDSLLTVGT 157

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGERGREVREFIE  LG + LK+S+V
Sbjct: 158 GQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGTEGLKRSIV 217

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+  + R  A  TA  IAEYF  +G NV+ ++DS+TR A + REI   +GE P  
Sbjct: 218 VVATSDQPALTRMKAAYTATAIAEYFRDRGKNVMFMMDSVTRVAMAQREIGLATGEPPTT 277

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GY  SVF+ LP+LLER G ++   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+
Sbjct: 278 KGYTPSVFAILPKLLERTGTNQL--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLD 335

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA +G++P V+ L S+SR+     S D K+  +    L+  ++   D+  IG Y+ G 
Sbjct: 336 RALANKGQFPAVNILKSISRVMSNIASHDHKEAANRFRQLLSTYQNAEDLINIGAYKKGS 395

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
              +D A+   P +  FLKQ
Sbjct: 396 SKDIDDAMQAYPHLISFLKQ 415


>gi|291288213|ref|YP_003505029.1| flagellar protein export ATPase FliI [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885373|gb|ADD69073.1| flagellar protein export ATPase FliI [Denitrovibrio acetiphilus DSM
           12809]
          Length = 435

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 162/382 (42%), Positives = 233/382 (60%), Gaps = 9/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH--WGRFRISPSACWCGRVINALGKPIDGD 116
           L +++    D + + P G  E I+ G  V +  +G   +  S    GRV++ LG P+DG 
Sbjct: 54  LAEIVGFKDDRIILMPYGESEGIAPGSHVTNESYGN-TVKVSDSLLGRVLDGLGNPMDGK 112

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +L + +    P A+ R+ ++    TGI+ ID    +  GQR+G+FAGSG+GKS 
Sbjct: 113 GPITDFEL-VNVYQSPPQALEREIIKTPVSTGIKAIDNLITIGRGQRVGIFAGSGVGKSV 171

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAP 235
            L M AR    D  +I+L+GERGREVREFIE  LG+  LK+SV+V+ATSD+S ++RK+  
Sbjct: 172 TLGMIARDSDADVNVIALIGERGREVREFIERDLGEEGLKRSVLVIATSDQSALIRKLGA 231

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF SKG NV+L++DS+TRFA + REI    GE P  +GY  SVF  LP+LLE
Sbjct: 232 FVGTAIAEYFRSKGLNVMLMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFGLLPKLLE 291

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G ++K KGNIT + +VLV+ D+ NDPI DSVRSI+DGHIVL+R LA +  YP +D L+
Sbjct: 292 RAG-TQKGKGNITGLYTVLVEADDMNDPIGDSVRSIIDGHIVLSRGLAAKNHYPAIDVLS 350

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S SRL  +  +  +      +  L+  + E  D+  IG Y  G +  +D+++ ++  I  
Sbjct: 351 SASRLMKEIVNDKQYANAGRMRDLLASYNEAEDLINIGAYVKGSNPKIDESIAKIGQIEQ 410

Query: 416 FLKQSPSDLSSEDVFQEITKKL 437
           FL+Q   D  +   F+E TK L
Sbjct: 411 FLRQGIDDSIN---FEESTKLL 429


>gi|256833238|ref|YP_003161965.1| ATPase, FliI/YscN family [Jonesia denitrificans DSM 20603]
 gi|256686769|gb|ACV09662.1| ATPase, FliI/YscN family [Jonesia denitrificans DSM 20603]
          Length = 446

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 159/378 (42%), Positives = 226/378 (59%), Gaps = 5/378 (1%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
            +GD V      +    +V+ ++       P+     +  G  V H  G  R+   +   
Sbjct: 41  AVGDVVAVGESGTPARAEVVAVHDGFATCMPLTAIPALRAGAQVRHTGGGIRVPVGSGLL 100

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ LG+PIDG   L   D  +++ +  P  + RQRV +    G+RV+D  T +  GQ
Sbjct: 101 GRVIDPLGEPIDGLGPLTHVDF-VDVDAAAPHPLARQRVSEPLALGVRVMDTLTSVGRGQ 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKSTLLSM AR       +I+L+GERGREVREF+ED LG + L +S+VV+
Sbjct: 160 RMGLFAGSGVGKSTLLSMIARGTDAQVSVIALIGERGREVREFLEDDLGPEGLARSIVVI 219

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R+ A  TA  IA++ +  G++V+L++DS+TR A + REI  + GE P  RG
Sbjct: 220 ATSDQPALMRQRAAFTATRIAQWLAQMGNDVVLMMDSLTRVAMAQREIGLSVGEPPATRG 279

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP S FS L  LLER G    E+G +T + +VLVDGD+HN+PIAD+ RSILDGH+VL+R 
Sbjct: 280 YPPSTFSVLANLLERAG--SAEQGTVTGLYTVLVDGDDHNEPIADAARSILDGHVVLDRK 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA  G YP +D LAS+SR+A K      +    +L   +      +D+  IG Y  G + 
Sbjct: 338 LAVRGHYPAIDALASISRVASKVNDPANQAHADTLRRFMAAKAGVQDLIDIGAYAAGSNP 397

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A+ Q   I  FL Q
Sbjct: 398 TVDAALAQAQDITSFLCQ 415


>gi|149912828|ref|ZP_01901362.1| flagellum-specific ATP synthase [Roseobacter sp. AzwK-3b]
 gi|149813234|gb|EDM73060.1| flagellum-specific ATP synthase [Roseobacter sp. AzwK-3b]
          Length = 474

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 162/417 (38%), Positives = 245/417 (58%), Gaps = 4/417 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G +S+I S    +  LS+   LGD V    +++  LG +V+R++ D+  + P    + + 
Sbjct: 23  GRVSAIQSQLLGIAGLSRVAKLGDRVEIACRDAVILGGEVLRLDGDLANVMPDFPPDRVH 82

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           +GD V       I PS  W GR+++  G+P+DG   L KG     + +  P A +R+   
Sbjct: 83  IGDRVRIADSALIRPSDRWIGRIVDPFGQPLDGR-PLPKGATGSALRADPPSAASRRGFG 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
              +TG+   +   P+  GQRIG+FAGSG+GKSTLL+   R+   D V+ +L+GERGRE+
Sbjct: 142 PRLETGLAAFNTLLPIVRGQRIGLFAGSGVGKSTLLATLGRNTQADVVVFALIGERGREL 201

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           R FIE  LG + + +SVVV ATSD+SP+ R+    TA+ +AEYF   G  VLL+ DSITR
Sbjct: 202 RHFIETGLGPEGMLRSVVVAATSDQSPLARRRCAWTAMAVAEYFRDAGKQVLLMFDSITR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+A  +GELP  RG+P S    +  L ER GP  +   +ITA+ SVLV G + +
Sbjct: 262 FAEAHREVAIAAGELPTMRGFPASTSHMIMSLCERAGPGAQGCADITALFSVLVAGSDLD 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD +R +LDGH+VL+R +AE GRYP +D L SVSR   +A S  E +++     L+ 
Sbjct: 322 EPVADILRGVLDGHVVLDRQIAERGRYPAIDLLRSVSRSLPQAASDAENQMILRARALLG 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +  +  +   G Y  G D  LD+A+   P +  FL ++   +S+++ F  +   L+
Sbjct: 382 AYARSETMLRAGLYNEGSDPELDQAIRAWPELDAFLSET-EPVSAQNSFDRLNLILR 437


>gi|332799176|ref|YP_004460675.1| flagellar protein export ATPase FliI [Tepidanaerobacter sp. Re1]
 gi|332696911|gb|AEE91368.1| flagellar protein export ATPase FliI [Tepidanaerobacter sp. Re1]
          Length = 442

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 168/400 (42%), Positives = 244/400 (61%), Gaps = 9/400 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF-VVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81
           G IS I  V  T+        LG+  ++   KN  ++  +V+    +IV + P+G  E++
Sbjct: 24  GRISKI--VGLTIESEGPPAELGEICIIKSPKNPKSIFSEVVGFRDEIVILMPLGDMEDL 81

Query: 82  SLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G+   +P      GRV++ LG PID    L K  L   + +  P  + R  
Sbjct: 82  GPGWDVEATGKKMTTPVGDELLGRVLDGLGNPIDDKGPL-KAKLHYPVSNNPPNPVERPI 140

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + +    G+R ID       GQR+G+FAGSG+GKSTLL M AR+   D  +I+LVGERGR
Sbjct: 141 ISEPLPVGVRAIDALLTCGIGQRLGIFAGSGVGKSTLLGMIARNTKADVNVIALVGERGR 200

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           E+  FI   LG+  +K+SV+VVATSD+ P++R  A  TA  IAEYF  +G NVLL++DSI
Sbjct: 201 ELNSFITKDLGEEGVKRSVIVVATSDKPPLVRTRAAFTATAIAEYFRDQGANVLLMMDSI 260

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + RE+   +GE PV RGY  SV++ LP+LLER G S   KG+IT + +VLVDGD+
Sbjct: 261 TRFAMAQREVGLAAGEPPVTRGYTPSVYATLPKLLERAGTS--AKGSITGIYTVLVDGDD 318

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PI+D+VR ILDGHIVL+R LA +  YP +D +AS+SRL +   + + +KL   + ++
Sbjct: 319 LNEPISDAVRGILDGHIVLSRELANKNHYPAIDVMASISRLMNDIVTPNHRKLAGRVKNI 378

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  ++E  D+  IG Y  G +  +D+++  +  I +FLKQ
Sbjct: 379 LSVYKEAEDLINIGAYVKGNNPQIDESIKYIDKIENFLKQ 418


>gi|312126822|ref|YP_003991696.1| atpase, flii/yscn family [Caldicellulosiruptor hydrothermalis 108]
 gi|311776841|gb|ADQ06327.1| ATPase, FliI/YscN family [Caldicellulosiruptor hydrothermalis 108]
          Length = 431

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 241/401 (60%), Gaps = 13/401 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGIGE 79
           G+++ +  +  T+      V +G     +   ++ L +V+    + V + P    VG+  
Sbjct: 19  GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGV-- 74

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
                 ++     F +       GR+++ LG+PIDG   + K  +   + ++ P  + R 
Sbjct: 75  -FPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERP 132

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +++L+GERG
Sbjct: 133 RIDTIMPLGIKAIDALLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERG 192

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE++EF+E D   + LK+SVVVVATSDES + R  A   A+ IAEYF  +G +VL ++DS
Sbjct: 193 RELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDS 252

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE PV+RGY  SVFS +P+LLER G  + ++G+ITA+ +VLVDGD
Sbjct: 253 LTRFAMAQREIGLAVGEPPVSRGYTPSVFSVMPKLLERAG--KNKRGSITALFTVLVDGD 310

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ +       ++L +    
Sbjct: 311 DFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPSHRELANETKR 370

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           ++  + ET D+  IG Y  G +  +D+A+  VP I  FL+Q
Sbjct: 371 VLAVYRETEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQ 411


>gi|288871077|ref|ZP_06410012.1| flagellar protein export ATPase FliI [Clostridium hathewayi DSM
           13479]
 gi|288864877|gb|EFC97175.1| flagellar protein export ATPase FliI [Clostridium hathewayi DSM
           13479]
          Length = 440

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 171/422 (40%), Positives = 251/422 (59%), Gaps = 11/422 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNL 59
            K +E++ Q  ++   NL    G I  I  V  TV  +     +GD       G +   +
Sbjct: 6   HKMIESVRQAVQN--ANLYTYLGKIDKI--VGTTVESMGPACRIGDVCTIDVPGGSPPVM 61

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P    E I  G  V + G R  I  S    GR ++A+G PIDG   
Sbjct: 62  AEVVGFRENRVLLMPYEETEGIGYGSTVRNTGERLLIPVSNELIGRTVDAMGMPIDGQGP 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           LG+      I  K    M R R++   + G++ ID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 122 LGEVAY-YPITGKRSNPMERPRIDTVIQMGVKAIDGLLTIGKGQRMGIFAGSGVGKSTLM 180

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+LVGER REV EFI   LG+  LK+SV+VVATS++S ++R    +T
Sbjct: 181 GMIAKNVKADVNVIALVGERSREVVEFINRDLGEEGLKRSVLVVATSNQSAMMRSKCTMT 240

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G +VLL++DS+TRFA + RE+  + GE PVARGY  S++SELP+LLER 
Sbjct: 241 ATTIAEYFKDQGMDVLLMMDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLERS 300

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+IT + +VLV+GD+ N+P++D+VR I+DGHI+L+R +A + RYP +D L+SV
Sbjct: 301 G--NFETGSITGIYTVLVEGDDANEPVSDTVRGIIDGHIMLSRKVATQNRYPAIDILSSV 358

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL       + K+    +  L+  +E   D+  IG Y+ G +  LD A+ ++  IY+FL
Sbjct: 359 SRLMSDIVMPEHKEAAGKIRKLLSVYESNIDLVSIGAYKKGTNKELDDALMRIDKIYEFL 418

Query: 418 KQ 419
           +Q
Sbjct: 419 QQ 420


>gi|182412243|ref|YP_001817309.1| flagellar protein export ATPase FliI [Opitutus terrae PB90-1]
 gi|177839457|gb|ACB73709.1| flagellar protein export ATPase FliI [Opitutus terrae PB90-1]
          Length = 441

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 160/343 (46%), Positives = 215/343 (62%), Gaps = 5/343 (1%)

Query: 97  PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           P     GRV++ALG+P DG   L   D S+   +  P  + RQR+   F+TG+R +D FT
Sbjct: 101 PGPEMLGRVLDALGRPYDGLGML-PVDRSVGRDATPPHPLRRQRIHHSFQTGVRALDAFT 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
           P   GQR+G+FAGSG+GKSTL+ M AR    D V+++LVGERGREVREFIE  LG + LK
Sbjct: 160 PFGRGQRLGLFAGSGVGKSTLMGMIARGSEADVVVVALVGERGREVREFIEKDLGPEGLK 219

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +++VVVATSD    LR  A  TA  IAE + ++G NVL ++DS+TRFA + REI    GE
Sbjct: 220 RAIVVVATSDTPAPLRLRAAFTATAIAEAWRAEGKNVLFMMDSVTRFAMAQREIGLAVGE 279

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               RGY  SVF+ LPRLLER G    E G ITA+ +VLV+GD+ N+P+AD+VR ILDGH
Sbjct: 280 PAATRGYTPSVFALLPRLLERTGAG--ELGAITALYTVLVEGDDMNEPVADAVRGILDGH 337

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R+LA    YP +D L SVSRL     + DE  L +     +  + +  D+  IG Y
Sbjct: 338 VVLSRALAHFNHYPAIDVLESVSRLIRDVCTPDEVALAAKAREHLALYRKNEDLISIGAY 397

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           + G +  LD+A+     +  FL+Q   + +  E  FQ + K L
Sbjct: 398 QKGANAALDRAIALHEPLRGFLRQPIEEHTPREQSFQLLKKIL 440


>gi|168180916|ref|ZP_02615580.1| flagellar protein export ATPase FliI [Clostridium botulinum NCTC
           2916]
 gi|182668289|gb|EDT80268.1| flagellar protein export ATPase FliI [Clostridium botulinum NCTC
           2916]
          Length = 438

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D A
Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +  +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433


>gi|187778751|ref|ZP_02995224.1| hypothetical protein CLOSPO_02346 [Clostridium sporogenes ATCC
           15579]
 gi|187772376|gb|EDU36178.1| hypothetical protein CLOSPO_02346 [Clostridium sporogenes ATCC
           15579]
          Length = 436

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 168/396 (42%), Positives = 239/396 (60%), Gaps = 17/396 (4%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-----G 103
           +++  KN     +V+    + V + P+G    I+ G  V   G+    P +  C     G
Sbjct: 47  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCRVIPQGK----PLSVICSENILG 102

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           +V++ LGKP++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQR
Sbjct: 103 KVLDGLGKPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFMTVGEGQR 160

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           IG+FAGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V A
Sbjct: 161 IGIFAGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCA 220

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+  ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY
Sbjct: 221 TSDKPALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGY 280

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             SVF++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSL
Sbjct: 281 TPSVFAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSL 338

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           A +  YP +D L+SVSRL  +    + K        L+  ++ + D+  IG Y  G +  
Sbjct: 339 AAKNHYPAIDVLSSVSRLMSEIALKEHKDAAGMARDLLATYKNSEDLINIGAYAKGSNPK 398

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +D A+H    I  FLKQ    +  +  F+E T  LQ
Sbjct: 399 VDMAIHYHEPILSFLKQG---IGEQHSFEESTSILQ 431


>gi|166714020|ref|ZP_02245227.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 442

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 158/367 (43%), Positives = 220/367 (59%), Gaps = 5/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +   +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVPSYHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419

Query: 419 QSPSDLS 425
           Q    LS
Sbjct: 420 QPTDQLS 426


>gi|153938471|ref|YP_001391960.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
           Langeland]
 gi|152934367|gb|ABS39865.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
           Langeland]
 gi|295319979|gb|ADG00357.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
           230613]
          Length = 438

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D A
Sbjct: 345 HYPAIDVLSSVSRLMSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +  +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433


>gi|307725651|ref|YP_003908864.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1003]
 gi|307586176|gb|ADN59573.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1003]
          Length = 467

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 158/388 (40%), Positives = 233/388 (60%), Gaps = 7/388 (1%)

Query: 43  VCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA- 99
           V LG+    +  N   L   +VI    D+  + P     +IS    V   GR    P   
Sbjct: 66  VTLGELCELRAANGALLQHAEVIGFTRDVALLSPFSRLADISRSTRVVGLGRSLTVPVGD 125

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRVI++LG+PIDG   L +      + +  P  M+R+ ++    TG+RV+D    L 
Sbjct: 126 TLLGRVIDSLGEPIDGLGPL-EATEQRPVFANPPSPMSRRMIDTPLATGVRVVDGMMTLA 184

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FA +G+GKSTLL MFAR    D  +I+L+GERGREVREF+E  LG + + +SV
Sbjct: 185 EGQRMGIFAPAGVGKSTLLGMFARGAQCDVAVIALIGERGREVREFVELILGPEGMARSV 244

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV ATSD S I R  A   A  IAE+F  +G  VLL++DS+TRFA + REI   +GE P 
Sbjct: 245 VVCATSDRSSIERAKAAYVATAIAEHFRDRGQRVLLMMDSLTRFARAQREIGLAAGEPPA 304

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RG+P S+F+ELPRLLER G    E G+ITA+ +VL + ++ NDPIA+ VR I+DGH++L
Sbjct: 305 RRGFPPSIFAELPRLLERAG--MGEHGSITALYTVLAEDESGNDPIAEEVRGIVDGHMIL 362

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R +A + +YP +D LAS+SR+  +  + +  +  + L  L+ +  E   +  IG Y+PG
Sbjct: 363 SREIAAKNQYPAIDVLASLSRVMPQVMTPEYVRAAARLRELLAKHREVELLLQIGEYQPG 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            + + D+A+ ++  I  F  Q+  +L++
Sbjct: 423 GNPLADEAIRKIDAIRAFFNQATHELAA 450


>gi|319795604|ref|YP_004157244.1| type III secretion apparatus h+-transporting two-sector atpase
           [Variovorax paradoxus EPS]
 gi|315598067|gb|ADU39133.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Variovorax paradoxus EPS]
          Length = 457

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 219/365 (60%), Gaps = 5/365 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEIS-LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           L +V+    +   + P+G    IS L ++V   G       +   GRV++A+G+PIDG  
Sbjct: 72  LAEVVGFRGNTAVLTPLGPITGISALTEVVPTGGGHSCPVGSQLLGRVLDAMGQPIDGRG 131

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L            V P + R+ ++    TGIR ID    L  GQRIGVF+  G+GKSTL
Sbjct: 132 GLAAAARQPVHREPVNP-LARRMIDAPLPTGIRAIDALLTLGEGQRIGVFSPPGVGKSTL 190

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+L+GERGREV+EFIE  LG + + KSV+VV+TS+  P+ R  +  
Sbjct: 191 LGMLARGSSADVNVIALIGERGREVKEFIEHSLGPEGMAKSVIVVSTSERPPMERIKSAH 250

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A TIAEYF  +G  VLL++DS++RFA + REI   SGE P  R YP S+FS LP+LLER
Sbjct: 251 VATTIAEYFRDQGKKVLLLMDSLSRFARAQREIGLASGEPPTRRSYPPSIFSMLPQLLER 310

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  + E G+ITA+ SVL +GD  NDPIA+ VRSILDGH+VL+R LA   RYP +D LAS
Sbjct: 311 AG--QGESGSITAIYSVLTEGDEENDPIAEEVRSILDGHVVLSRKLAAANRYPAIDVLAS 368

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+         +   + L  L+ +++E   +  IG Y+PG D   D AV   P I +F
Sbjct: 369 ISRVMPLVTDPAHRAAAAHLRELLSKYQEMELLVQIGEYKPGGDAQADAAVRARPAILEF 428

Query: 417 LKQSP 421
           L Q+P
Sbjct: 429 LAQAP 433


>gi|302670721|ref|YP_003830681.1| flagellar protein export ATPase FliI [Butyrivibrio proteoclasticus
           B316]
 gi|302395194|gb|ADL34099.1| flagellar protein export ATPase FliI [Butyrivibrio proteoclasticus
           B316]
          Length = 452

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 169/411 (41%), Positives = 242/411 (58%), Gaps = 25/411 (6%)

Query: 45  LGDFVVHQGKNSDN-----------LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR- 92
           LGD  +   K  DN           + +V+    + V + P      I  G +V +    
Sbjct: 43  LGDICLIYPKKKDNETMSDSKGRPAMAEVVGFKDNHVQLMPYENTSGIGNGSIVENTDSP 102

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKG-----DLSMEIMSKVPPAMNRQRVEKGFKT 147
            R++      G+ ++ LG+ IDG  S GKG      ++  + ++ P  M R  + +    
Sbjct: 103 LRVNVGEGLLGQTLDGLGR-IDGT-SYGKGVMLEDGVAYSVENQPPDPMTRDPISEVLSL 160

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G++ +D    +  GQRIG+FAGSG+GKSTLL MFAR+   D  +I+L+GERGREVREFIE
Sbjct: 161 GVKAVDGLLTVGKGQRIGIFAGSGVGKSTLLGMFARNTQADINVIALIGERGREVREFIE 220

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
             LG+  +K+S+VV ATSD+  + R  A  TA +IAEYF  KG +VLL++DS+TRF+ + 
Sbjct: 221 RDLGEEGMKRSIVVCATSDKPALERLKAAKTATSIAEYFRDKGKDVLLMMDSLTRFSMAQ 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI   SGE PV+RGYP SV++E+P+LLER G S K  G+IT + +VLVDGD+ N+PI D
Sbjct: 281 REIGLASGEPPVSRGYPPSVYAEMPKLLERAGRSRK--GSITGLYTVLVDGDDMNEPITD 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R ILDGHIVLNR LA++  YP +D LAS+SR        + KK    L +++  + + 
Sbjct: 339 TARGILDGHIVLNRKLAQKNHYPAIDVLASISRCMSAIADPEHKKAAGKLKNVLATYNDA 398

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            D+  IG YR G +  +D AV ++  +  FL Q   +  S   F+EI   L
Sbjct: 399 EDLINIGAYRSGANKNIDYAVSKIEQVNAFLTQETDEKFS---FEEIRDML 446


>gi|310659042|ref|YP_003936763.1| flagellum-specific ATP synthase [Clostridium sticklandii DSM 519]
 gi|308825820|emb|CBH21858.1| flagellum-specific ATP synthase [Clostridium sticklandii]
          Length = 436

 Score =  282 bits (721), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 236/382 (61%), Gaps = 8/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+    D V + P+G  E I  G +V   G    +       GR+++ +G PID D 
Sbjct: 57  LAEVVGFKEDTVLLMPLGEMEGIGPGSMVVATGNTLEVDVGEQLLGRILDGMGNPID-DF 115

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                + S  + ++ P  ++R ++ +    G++ ID F     GQRIG+FAGSG+GKSTL
Sbjct: 116 EPPSLNYSYPVNNQPPNPLSRTKISEPLPLGVKAIDGFLTCGRGQRIGIFAGSGVGKSTL 175

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREV+EFI++ L +  LKKSVV+V TSD+ P++R    L
Sbjct: 176 LGMIARNTLADINVIALIGERGREVKEFIDNDLEEEGLKKSVVIVVTSDQPPLVRMKGAL 235

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF   G NV+L++DS+TRF+ + RE+    GE PV +GY  SVF+ LP+LLER
Sbjct: 236 LATSIAEYFRDCGKNVVLMMDSLTRFSMAQREVGLAIGEPPVTKGYTPSVFAVLPKLLER 295

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S K  G+IT + +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D LAS
Sbjct: 296 AGNSSK--GSITGLYTVLVDGDDMNEPIADAVRGILDGHIVLSRNLANKNHYPAIDILAS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+       +   +V  +  L+  + ++ D+  IG Y  G +  +D A+ ++ II +F
Sbjct: 354 VSRVMPNIVDKEHIDIVGRIKDLMATYRDSEDLINIGAYIKGTNKKVDMAIEKIEIINEF 413

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L+Q   D  +   F EI + L+
Sbjct: 414 LRQGIHDRLT---FDEIVELLR 432


>gi|52080226|ref|YP_079017.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580]
 gi|52785603|ref|YP_091432.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580]
 gi|319645995|ref|ZP_08000225.1| FliI protein [Bacillus sp. BT1B_CT2]
 gi|52003437|gb|AAU23379.1| flagellar-specific ATP synthase [Bacillus licheniformis ATCC 14580]
 gi|52348105|gb|AAU40739.1| FliI [Bacillus licheniformis ATCC 14580]
 gi|317391745|gb|EFV72542.1| FliI protein [Bacillus sp. BT1B_CT2]
          Length = 437

 Score =  282 bits (721), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 153/359 (42%), Positives = 219/359 (61%), Gaps = 5/359 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           + + P      I+ G +V   G   R+   +   G+V++A G P+DG   L KG   +  
Sbjct: 66  ILLMPYLEAANIAPGSIVEATGESLRVKVGSGLIGQVVDAFGNPLDGS-VLPKGLAQVST 124

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  M R  + +    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR    D
Sbjct: 125 DQAPPNPMKRPPIREKMAVGVRSIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARETAAD 184

Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+LVGERGREVREFIE  LG+  LK+++VVVATSD+  ++R  A  TA  IAEYF  
Sbjct: 185 LNVIALVGERGREVREFIEKDLGEEGLKRTIVVVATSDQPALMRLKAAYTATAIAEYFRD 244

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G +E   G+I
Sbjct: 245 KGQNVMFMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFAILPKLLERTGTTES--GSI 302

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+       
Sbjct: 303 TAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNIAEK 362

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D  +  +    ++  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + +S
Sbjct: 363 DHIRAANRFREMLSTYQNSEDLINIGAYKKGSSREIDEAIQFHPKLISFLKQEVDEAAS 421


>gi|168183272|ref|ZP_02617936.1| flagellar protein export ATPase FliI [Clostridium botulinum Bf]
 gi|237796099|ref|YP_002863651.1| flagellar protein export ATPase FliI [Clostridium botulinum Ba4
           str. 657]
 gi|182673660|gb|EDT85621.1| flagellar protein export ATPase FliI [Clostridium botulinum Bf]
 gi|229261134|gb|ACQ52167.1| flagellar protein export ATPase FliI [Clostridium botulinum Ba4
           str. 657]
          Length = 438

 Score =  282 bits (721), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 167/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D A
Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +  +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433


>gi|148269842|ref|YP_001244302.1| flagellar protein export ATPase FliI [Thermotoga petrophila RKU-1]
 gi|147735386|gb|ABQ46726.1| type III secretion system ATPase, FliI/YscN [Thermotoga petrophila
           RKU-1]
          Length = 427

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 165/390 (42%), Positives = 242/390 (62%), Gaps = 11/390 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           +  GKN+  L +V+    + V + P      + +   V    +   +  S    GRV + 
Sbjct: 38  LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMSCEVIRTNKVLEVGVSRKMIGRVFDG 95

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PIDG   + +      + +  P  + R+R++     GIR ID    +  GQRIG+FA
Sbjct: 96  LGRPIDGKPFVPED--RYPLTNNPPNPLKRRRIKDPLPVGIRSIDGLITVGKGQRIGIFA 153

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKSTLL M AR+   D  +++L+GERGREVREFIE  LG+  LK+S++VV+TSD+ 
Sbjct: 154 GSGVGKSTLLGMIARNTTADVNVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 213

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  + LTA +IAE+F   G +VLL++DS+TR+A + RE+    GE P  RGYP SVF
Sbjct: 214 ALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVF 273

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP++LER G S+K  G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE   
Sbjct: 274 AGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNH 331

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP VD LASVSRL +   + + ++  + L  L+  +E  +D+  IG Y+ G + ++DKAV
Sbjct: 332 YPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAV 391

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
                I  FLKQ   + SS   F+E  +KL
Sbjct: 392 EMKDEIDSFLKQGVFEKSS---FEETLQKL 418


>gi|304438475|ref|ZP_07398415.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368558|gb|EFM22243.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 458

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 165/371 (44%), Positives = 230/371 (61%), Gaps = 10/371 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS-LGKGDLSME 127
           V + PVG  + I  G  V   GR  R+       GRV++ LG PIDG    L K +  ++
Sbjct: 80  VLLMPVGEMQGIGPGCEVVATGRQLRVKVGMELLGRVLDGLGNPIDGKGPILAKEEYPLQ 139

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
             +  PP + R R+      G+R ID    +  GQRIG+ AGSG+GKSTLLSM AR+   
Sbjct: 140 --APPPPPLTRPRIHDNLYVGVRAIDGLITMGDGQRIGIMAGSGVGKSTLLSMIARNTEA 197

Query: 188 DKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+LVGERGREVR+FIE  LG+  LK+SVVVVATSD+  ++R    +T   IAEYF 
Sbjct: 198 DISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFR 257

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G SEK  G+
Sbjct: 258 DQGRKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTSEK--GS 315

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L+SVSR+  +  +
Sbjct: 316 ITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLSSVSRVMYEVVA 375

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +  +    +  L+  ++E  D+  IG Y  G    +D A+ ++  I DFL Q   +++S
Sbjct: 376 KNHLEAAQEMRQLMAVYQEAEDLIHIGAYVKGSSPKIDAAIQKIDGINDFLCQGIYEVTS 435

Query: 427 EDVFQEITKKL 437
              + E  ++L
Sbjct: 436 ---YAETEQQL 443


>gi|317407757|gb|EFV87684.1| BscN protein [Achromobacter xylosoxidans C54]
          Length = 455

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 157/388 (40%), Positives = 232/388 (59%), Gaps = 10/388 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           VCL   + + G++ +  G+V+    D   + PVG    IS    V   GR  + P  A  
Sbjct: 60  VCL---LRNPGEDFEMKGEVVGFVKDAALLTPVGDMHGISSSTEVIPTGRSHMVPVGAGL 116

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV++ LG+P+D D  LG  + S    + +  P  + R+ + +  + G+R +D      
Sbjct: 117 LGRVLDGLGRPLDAD-RLGPLEASKFYPVFADAPDPLTRRIIHEPLELGVRALDGLLTCG 175

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FA +G GKSTL+ M  +    D  +++L+GERGREVREF+E  LG D  ++SV
Sbjct: 176 EGQRMGIFAAAGGGKSTLMGMLVKGAAVDVTVVALIGERGREVREFLEHELGEDGRRRSV 235

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V ATSD+S + R  A   A  IAEYF  +G  VL ++DS+TRFA + REI   +GE P 
Sbjct: 236 IVCATSDKSSMERAKAAYVATAIAEYFRDQGKKVLFLMDSVTRFARAQREIGLAAGEPPT 295

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP SVF+ LPRL+ER+G ++K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHIVL
Sbjct: 296 RRGYPPSVFATLPRLMERVGMNDK--GSITALYTVLVEGDDMTEPVADETRSILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA    YP +D LAS SR+ +     + K     +  L+ +++E   +  IG Y+PG
Sbjct: 354 SRKLAASNHYPAIDVLASASRVMNAVVRPEHKAAAGRIRELMAKYQEVELLVKIGEYKPG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            D   D+A+ ++  I  FL+Q   + S+
Sbjct: 414 GDAATDEALRKIDAIRGFLRQRTEERST 441


>gi|167750727|ref|ZP_02422854.1| hypothetical protein EUBSIR_01705 [Eubacterium siraeum DSM 15702]
 gi|167656406|gb|EDS00536.1| hypothetical protein EUBSIR_01705 [Eubacterium siraeum DSM 15702]
 gi|291532062|emb|CBK97647.1| type III secretion system ATPase, FliI/YscN [Eubacterium siraeum
           70/3]
 gi|291558201|emb|CBL35318.1| type III secretion system ATPase, FliI/YscN [Eubacterium siraeum
           V10Sc8a]
          Length = 434

 Score =  282 bits (721), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 158/380 (41%), Positives = 233/380 (61%), Gaps = 18/380 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  N   V + P    E I  G +V + G +  +       GR+I+ALG P+D  + +
Sbjct: 57  EVVGFNEHKVLLMPYTDLEGIGPGSIVDNTGDKLNVRVGDKLIGRIIDALGNPLDDGEPI 116

Query: 120 GKGDLSMEIMSKVPPA------MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
                  E    VP A      + R ++ +  + G++ ID    +  GQR+G+FAGSG+G
Sbjct: 117 -------EYTDTVPIAGIPVNPLTRPKIHEPIELGVKAIDGLLTMGKGQRMGIFAGSGVG 169

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRK 232
           KSTL+ M AR    D  +I+LVGERGREVREFIE+ LG+  + +SVVVVATSD+  ++R 
Sbjct: 170 KSTLMGMIARKVKADLNVIALVGERGREVREFIENDLGEEGMARSVVVVATSDQPAMMRN 229

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             P+TA  IAEYF S+G +VLL++D++TRFA + REI  ++GE PVARGY  S+++ +P+
Sbjct: 230 KCPMTATAIAEYFCSQGKDVLLMMDNLTRFAMAQREIGLSTGEPPVARGYTPSIYAAMPK 289

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G    EKG+IT + +VLV+GD+ N+PI+D+VR I+DGHIVL+R +A +  YP +D
Sbjct: 290 LLERAG--NFEKGSITGIYAVLVEGDDTNEPISDTVRGIIDGHIVLSRKIAAQNHYPAID 347

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            L S+SRL       +  K    L +L+  +    D+  IG Y+ G +  LD+A+ ++  
Sbjct: 348 ILPSISRLMSAIADPEHNKAAGKLRNLLALYNNNADLISIGAYKKGTNPALDEAIKKIDK 407

Query: 413 IYDFLKQSPSD-LSSEDVFQ 431
           I DFL Q   +  S ED  +
Sbjct: 408 INDFLMQGMYESFSMEDTIK 427


>gi|332559808|ref|ZP_08414130.1| FliI2 [Rhodobacter sphaeroides WS8N]
 gi|332277520|gb|EGJ22835.1| FliI2 [Rhodobacter sphaeroides WS8N]
          Length = 436

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 169/414 (40%), Positives = 244/414 (58%), Gaps = 2/414 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           LAE  +  L  + G ++ I     +V  L Q   LGD V   G      G+V+R++   V
Sbjct: 9   LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  E +++GD V   G   I+P   W GR+++ LG+P+DG   L +G  +  + +
Sbjct: 69  AILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             PPA  R+ +     TG+ V D   PL  GQRIG+FAGSG+GKS+LL+ FARS   D V
Sbjct: 128 AAPPAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187

Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I LVGERGRE+REF E  LG   + ++VVV ATSD+SP++R+     A+ +AE+F  +G
Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+A   GE    RG+P S    +  L ER GP  +  G+ITA
Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V+SVLV G +  +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR   +A S  E
Sbjct: 308 VLSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASMAE 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L++    L+  ++    +   G Y  G D ++D A+   P +  FL +   D
Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421


>gi|294500936|ref|YP_003564636.1| flagellum-specific ATP synthase [Bacillus megaterium QM B1551]
 gi|294350873|gb|ADE71202.1| flagellum-specific ATP synthase [Bacillus megaterium QM B1551]
          Length = 437

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 166/388 (42%), Positives = 239/388 (61%), Gaps = 9/388 (2%)

Query: 44  CLGDF-VVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100
            +GD   +H  +  D +  +V+  N + V + P      I  G LV    +  ++S    
Sbjct: 38  SIGDVCFIHLSERGDKIRAEVVGFNGEHVILMPYTSVRYIGPGCLVETTEKPLQVSVGKE 97

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLC 159
             G+V+++LG P+DG +      L   +  + PP  + R  +E+  + G+R ID    + 
Sbjct: 98  LIGQVLDSLGNPLDGSEL--SHYLPFVLTDQDPPNPLERPPIEQPIEVGVRTIDSLLTVG 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
            GQRIG+FAGSG+GKSTLL M AR+   D  +I+LVGERGREVREFIE  LG+  LK+SV
Sbjct: 156 QGQRIGIFAGSGVGKSTLLGMIARNTKADINVIALVGERGREVREFIERDLGEEGLKRSV 215

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVATSD+  +LR  A  TA +IAEYF  +G +V++++DS+TR A + REI    GE P 
Sbjct: 216 VVVATSDQPALLRMKAAYTATSIAEYFRDEGLSVMMMMDSVTRVAMAQREIGLAVGEPPT 275

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GY  SVF+ LPRLLER G ++   G+ITA  +VLVDGD+ N+PI+D+VR I+DGHIVL
Sbjct: 276 TKGYTPSVFASLPRLLERTGTNQH--GSITAFYTVLVDGDDMNEPISDTVRGIIDGHIVL 333

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA +G+YP ++ L SVSR+ +   S   K+    L  L+  +  + D+  IG Y+ G
Sbjct: 334 DRELANKGQYPAINVLKSVSRVMNHIVSERHKEAAEKLRSLMATYANSEDLINIGAYKRG 393

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               +D+A+H  P+I  FLKQ  ++  S
Sbjct: 394 SSAYIDEAIHYHPVIDAFLKQKTNEHPS 421


>gi|302872568|ref|YP_003841204.1| ATPase, FliI/YscN family [Caldicellulosiruptor obsidiansis OB47]
 gi|302575427|gb|ADL43218.1| ATPase, FliI/YscN family [Caldicellulosiruptor obsidiansis OB47]
          Length = 434

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/328 (45%), Positives = 214/328 (65%), Gaps = 4/328 (1%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           F I       GR+++ LG+PIDG   + K  +   + ++ P  + R R++     GI+ I
Sbjct: 90  FEIKVGNELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERPRIDTIMPLGIKAI 148

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLG 211
           D    +  GQR+G+FAGSG+GKSTLL M AR+   D  +++L+GERGRE++EF+E D   
Sbjct: 149 DALLTIGRGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERGRELKEFLEKDLKE 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           + LK+SVVVVATSDES + R  A   A+ IAEYF  +G +VL ++DS+TRFA + REI  
Sbjct: 209 EGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDSLTRFAMAQREIGL 268

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             GE PV+RGY  SVFS +P+LLER G  + +KG+ITA+ +VLVDGD+ N+PI D+ R I
Sbjct: 269 AIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSITALFTVLVDGDDFNEPITDTARGI 326

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIVL+R++A +  YP VD LAS+SR+ +    +  ++L +    ++  + E  D+  
Sbjct: 327 LDGHIVLSRAIANKNHYPAVDVLASISRVMNDIVESSHRELANETKRILAVYREAEDLIN 386

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           IG Y  G +  +D+A+  VP I  FL+Q
Sbjct: 387 IGAYTKGSNPEIDRAIELVPRINQFLRQ 414


>gi|170758369|ref|YP_001787980.1| flagellar protein export ATPase FliI [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169405358|gb|ACA53769.1| flagellar protein export ATPase FliI [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 438

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D A
Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ   +  S   F+E T  LQ
Sbjct: 405 IHYHESIISFLKQGIGEHHS---FKESTSILQ 433


>gi|311695214|gb|ADP98087.1| flagellum-specific ATP synthase FliI [marine bacterium HP15]
          Length = 464

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 155/391 (39%), Positives = 229/391 (58%), Gaps = 4/391 (1%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
           V  T+ C+   + +GD  V  G+N+ N+  +V+    D VY+ P+   E +  G  V   
Sbjct: 32  VGLTLECVGCPMVVGDRCVIFGQNTGNVEAEVVGFEDDRVYLMPLTAIEGLKPGARVVPL 91

Query: 91  -GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
               R+       GRV++  G+P+DG   L + +  + +   +   +NR  V +    GI
Sbjct: 92  SAASRVPVGPQLLGRVVDGSGEPLDGKGPL-QAEARVALTGDIINPLNRAPVRQSMDVGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           R I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGREV+EFIED 
Sbjct: 151 RAINALMTVGQGQRLGLFAGSGVGKSMLLGMMTRFTDADITVVGLIGERGREVKEFIEDI 210

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG+  L +SVVV A +D+SP++R  A +    IAEY+  +G  VLL++DS+TR+A + RE
Sbjct: 211 LGEEGLSRSVVVAAPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSLTRYAQAQRE 270

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA   GE P  +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ 
Sbjct: 271 IALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIADAA 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+R LAEEG YP +D  AS+SR+  +    +          +  R+++ RD
Sbjct: 331 RAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFSRAQRFKQVYSRYQQARD 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +G Y  G D   D A+  +  +  FL+Q
Sbjct: 391 LISVGAYVKGSDPETDFAITHIGNMRQFLQQ 421


>gi|157364752|ref|YP_001471519.1| flagellar protein export ATPase FliI [Thermotoga lettingae TMO]
 gi|157315356|gb|ABV34455.1| flagellar protein export ATPase FliI [Thermotoga lettingae TMO]
          Length = 436

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 150/328 (45%), Positives = 215/328 (65%), Gaps = 4/328 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R  +  S    GR+++ LG+PIDG   + K      +++  P  + R R+      G+R 
Sbjct: 92  RLDVGVSEDMKGRIVDGLGRPIDGKPLIAKH--RYPLINSAPHPLKRSRITAPLPVGVRA 149

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID F  +  GQRIG+FAGSG+GKSTLL M AR+   D  +I+L+GERGREVREFIE  L 
Sbjct: 150 IDGFITIGKGQRIGIFAGSGVGKSTLLGMIARNTVADVNVIALIGERGREVREFIEKDLA 209

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             ++KS+VVV+TSD+  ++R  A  TA +IAEYF   G +VLL++DS+TR+A + REI  
Sbjct: 210 KGIEKSIVVVSTSDQPALMRSKALYTATSIAEYFRDLGYDVLLMVDSLTRWAMAQREIGL 269

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             GE P ARGYP SVF+ +P +LER G S  +KG+ITA+ +VLV+ D+ N+PI+D+VRS+
Sbjct: 270 AIGEPPTARGYPPSVFAGIPGILERAGNS--DKGSITAIYTVLVEADDFNEPISDTVRSV 327

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           +DGHI+L+R L+E   YP +D LASVSRL       D  +   +L +L+  + E +D+  
Sbjct: 328 VDGHIMLSRRLSELNHYPAIDVLASVSRLMVDIVGHDHLEASRNLRNLMATYYEAKDLID 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +G Y+PG +  +D+A+  +  I  FLKQ
Sbjct: 388 VGAYKPGSNPQIDRAIKMIDPINSFLKQ 415


>gi|15895428|ref|NP_348777.1| flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824]
 gi|15025152|gb|AAK80117.1|AE007716_6 Flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824]
 gi|325509574|gb|ADZ21210.1| Flagellar-Type ATPase [Clostridium acetobutylicum EA 2018]
          Length = 438

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/392 (41%), Positives = 238/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           +++  +N     +V+  N   V + P+G  E IS G  V   G    +  S    G+V++
Sbjct: 47  IIYNERNRPIKCEVVGFNEGRVILMPLGELEGISPGCRVVQTGIPLSVKCSDELLGKVLD 106

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P+ G++   K  +  ++  + P  + R+R++   +TG+R ID F     GQRIG+F
Sbjct: 107 GLGAPLRGEEV--KSGVLYQLDREPPDPLKRRRIKNSIETGVRAIDGFLTCGEGQRIGIF 164

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M AR    D  +I+L+GERGREV +FIE  LG+  +K+SV+V ATSD+
Sbjct: 165 AGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLDFIEKDLGEEGMKRSVIVCATSDK 224

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  KG  V+L++DS+TRFA + RE+   +GE P  +GY  SV
Sbjct: 225 PALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLATGEPPATKGYTPSV 284

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LPRL+ER G +E   G+ITA  +VLVDGD+ N+PIAD+VRSILDGHIVL+R+LA + 
Sbjct: 285 FAMLPRLMERSGMAET--GSITAFYTVLVDGDDFNEPIADAVRSILDGHIVLSRNLAAQN 342

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +   +D KK       L+  +++  D+  IG Y  G +  +D A
Sbjct: 343 HYPAIDVLSSVSRLMSEIADSDHKKAAGLARDLLAEYKKNEDLINIGAYVKGTNNKVDAA 402

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           ++    I  +LKQ   + SS   F+E    L+
Sbjct: 403 INYNDRIISYLKQGIEEKSS---FEESINSLK 431


>gi|170756099|ref|YP_001782276.1| flagellar protein export ATPase FliI [Clostridium botulinum B1 str.
           Okra]
 gi|169121311|gb|ACA45147.1| flagellar protein export ATPase FliI [Clostridium botulinum B1 str.
           Okra]
          Length = 438

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 166/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y  G +  +D +
Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMS 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +  +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433


>gi|302389661|ref|YP_003825482.1| type III secretion system ATPase, FliI/YscN [Thermosediminibacter
           oceani DSM 16646]
 gi|302200289|gb|ADL07859.1| type III secretion system ATPase, FliI/YscN [Thermosediminibacter
           oceani DSM 16646]
          Length = 439

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 159/363 (43%), Positives = 226/363 (62%), Gaps = 5/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+    D + + P+G  E I  GD V   G+    P      GR+++ LG PIDG  
Sbjct: 58  LAEVVGFRDDTLILMPLGDMEGIGPGDEVEATGKKLTVPVGEQLLGRILDGLGTPIDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K  +   + +  P  + R  +      GI+VID       GQR+G+FAGSG+GKSTL
Sbjct: 118 PV-KSHIHYPLFNSPPNPVERAPITSPLPLGIKVIDTLLTCGRGQRVGIFAGSGVGKSTL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGRE+  F+   LG+  LK+SVVVVATSD+SP++R  A  
Sbjct: 177 LGMIARNTKADVNVIALIGERGRELNSFLMKDLGEEGLKRSVVVVATSDKSPLIRTKAAF 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +V+L++DS+TRFA + RE+   +GE PV +GY  SVF+ LP+LLER
Sbjct: 237 TATAIAEYFRDQGLDVMLMMDSVTRFAMAQREVGLAAGEPPVTKGYTPSVFAILPKLLER 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G+IT + +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LA    YP +D LAS
Sbjct: 297 AGTS--SAGSITGIYTVLVEGDDLNEPISDTVRGILDGHIVLSRTLANRNHYPAIDVLAS 354

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL +   S + +KL + +  LI  + E  D+  IG Y  G +  +D+A+  +  I +F
Sbjct: 355 ISRLMNDVISDEHRKLAAKVKSLISIYNEAEDLINIGAYVRGSNPKIDEALKYIDDIRNF 414

Query: 417 LKQ 419
           L Q
Sbjct: 415 LVQ 417


>gi|212639564|ref|YP_002316084.1| flagellum-specific ATP synthase [Anoxybacillus flavithermus WK1]
 gi|212561044|gb|ACJ34099.1| Flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Anoxybacillus flavithermus WK1]
          Length = 437

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 154/362 (42%), Positives = 225/362 (62%), Gaps = 5/362 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P    ++I+ G +V    G   +   +   GRVI+ALG P+D D  
Sbjct: 57  AEVVGFRDEYVLLMPYATVQDIAPGCIVEATGGPLEMKVGSALVGRVIDALGAPLD-DQP 115

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             KG  ++ I  + P  M R  + +  + G+++ID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 116 FPKGLTAVPIDRQPPNPMTRPPISEPIEVGVKMIDSLLTVGKGQRVGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREVREFIE  LG + LK+S+V+VATSD+  ++R     T
Sbjct: 176 GMIARNTNADLNVIALIGERGREVREFIERDLGPEGLKRSIVIVATSDQPALMRIKGAYT 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G NV+ ++DS+TR A + RE+    GE P  +GY  SVF+ LP+LLER 
Sbjct: 236 ATAIAEYFRDQGLNVMFMMDSVTRVAMAQREVGLAVGEPPTTKGYTPSVFAILPKLLERT 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G +E   G ITA  +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G+YP ++ L SV
Sbjct: 296 GTNEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHFVLERQLANKGQYPAINVLKSV 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+ +   + + +K+   L  L+  + ++ D+  IG Y+ G    +D+A+   P I  FL
Sbjct: 354 SRVMNYIVTPEHRKVAEKLRELLATYVQSEDLIQIGAYKRGSSREIDEAIRYYPKIISFL 413

Query: 418 KQ 419
           KQ
Sbjct: 414 KQ 415


>gi|218673217|ref|ZP_03522886.1| flagellum-specific ATP synthase [Rhizobium etli GR56]
          Length = 175

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 129/175 (73%), Positives = 153/175 (87%)

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M RQRV  GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM AR+D FDKV+I+LV
Sbjct: 1   MTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFDKVVIALV 60

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGREVREFIED LG N+KK++ +VATSDESP+LRKMAPLTA+TIAE+F  KG+NVL I
Sbjct: 61  GERGREVREFIEDTLGSNMKKAIAIVATSDESPMLRKMAPLTAITIAEHFRDKGENVLFI 120

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER GP  +  G ITA+
Sbjct: 121 VDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAGPGPEGAGTITAI 175


>gi|222530136|ref|YP_002574018.1| FliI/YscN family ATPase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456983|gb|ACM61245.1| ATPase, FliI/YscN family [Caldicellulosiruptor bescii DSM 6725]
          Length = 431

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 240/401 (59%), Gaps = 13/401 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGIGE 79
           G+++ +  +  T+      V +G     +   ++ L +V+    + V + P    VG+  
Sbjct: 19  GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGV-- 74

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
                 ++     F +       GR+++ LG+PIDG   + K  +   + ++ P  + R 
Sbjct: 75  -FPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERP 132

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +++L+GERG
Sbjct: 133 RIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERG 192

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE++EF+E D   + LK+SVVVVATSDES + R  A   A+ IAEYF  +G +VL ++DS
Sbjct: 193 RELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDS 252

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE PV+RGY  SVFS +P+LLER G  + +KG+ITA+ +VLVDGD
Sbjct: 253 LTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSITALFTVLVDGD 310

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ +       ++L +    
Sbjct: 311 DFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPSHRELANETKR 370

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           ++  + E  D+  IG Y  G +  +D+A+  VP I  FL+Q
Sbjct: 371 VLAVYREAEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQ 411


>gi|269836579|ref|YP_003318807.1| ATPase, FliI/YscN family [Sphaerobacter thermophilus DSM 20745]
 gi|269785842|gb|ACZ37985.1| ATPase, FliI/YscN family [Sphaerobacter thermophilus DSM 20745]
          Length = 442

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 152/327 (46%), Positives = 210/327 (64%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ LG+PIDG   L   D    + S  P  ++R  +E    TGIR ID       GQ
Sbjct: 107 GRVIDGLGRPIDGQGPLLCRD-ETRLSSSPPDPLSRMPIEHPLPTGIRAIDALITCGRGQ 165

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKSTLL M  R+   D  +++L+GERGREV+EFIE  LG + L +SVVVV
Sbjct: 166 RLGIFAGSGVGKSTLLGMICRNADCDVRVVALIGERGREVQEFIERDLGPEGLARSVVVV 225

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +TSD+  +LR  A  TA  IAEYF  +G NV L++DS+TR A + REI    GE P  RG
Sbjct: 226 STSDQPALLRLKAAWTATMIAEYFRDRGLNVALLMDSVTRLAMAQREIGLAVGEPPTTRG 285

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF+ LPRLLER G    E+G+ITA  +VLV+GD+  +P+ D+VR ILDGHI L+R 
Sbjct: 286 YTPSVFALLPRLLERAG--NAERGSITAFYTVLVEGDDLTEPVTDAVRGILDGHIYLSRK 343

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G +P ++ L SVSRL +       ++L + +  L+  +E  RD+  IG Y  G + 
Sbjct: 344 LADSGHFPAIEVLGSVSRLMNAIVDERHRRLAAEVRELMAAYEGARDLIEIGAYAAGSNP 403

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++D+A+  +P I +FL+Q+P + +  D
Sbjct: 404 VVDRAIAHMPRIREFLRQAPDEPARMD 430


>gi|326791540|ref|YP_004309361.1| ATPase, FliI/YscN family [Clostridium lentocellum DSM 5427]
 gi|326542304|gb|ADZ84163.1| ATPase, FliI/YscN family [Clostridium lentocellum DSM 5427]
          Length = 433

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 161/401 (40%), Positives = 241/401 (60%), Gaps = 9/401 (2%)

Query: 25  YISSITSVY-YTVTCLSQYVCLGD--FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           Y   +T V   ++  L     +GD  ++  +GK      +V+    + + + P+G  E I
Sbjct: 18  YKGRVTRVVGMSIETLGPIANIGDICYIQPRGKKELVTAEVVGFKDEYLLLMPLGNLEGI 77

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V  +G +  +       G+V++   KPI+GD+   +    + I +  P  + R R
Sbjct: 78  GPGCEVLAYGDKLSVKVDESLLGKVVDWRAKPINGDELHCR--YQVPIDNTAPNPLTRNR 135

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +    + G+R ID    +  GQRIG+FAGSG+GKSTL+ M AR+   D  II+L+GERGR
Sbjct: 136 ITIPLQLGVRAIDGMLTVGKGQRIGIFAGSGVGKSTLMGMIARNALSDINIIALIGERGR 195

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D   + LK+S+VVVATSD+  ++R  A +TA  +AE+F ++G +VLL++DS+
Sbjct: 196 EVREFIENDLQAEGLKRSIVVVATSDQPALMRLKAAMTATALAEHFRAQGKDVLLMMDSL 255

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRF+ + REI    GE PV+RGY  SVF+++P+LLER G S  +KG+IT + +VLVDGD+
Sbjct: 256 TRFSMAQREIGLAIGEPPVSRGYTPSVFAQMPKLLERAGNS--DKGSITGMYTVLVDGDD 313

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PI D+ R ILDGHIVL+R LA +G YP +D LAS+SR+     S   K     +   
Sbjct: 314 FNEPITDTARGILDGHIVLSRKLANKGHYPAIDVLASISRVMSNIVSDQHKTYAREIKKH 373

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++E  D+  +G Y  G    +D A+ ++  I +FL QS
Sbjct: 374 MAVYKEAEDLINVGAYNKGSSEEIDAAIDKMKFINEFLCQS 414


>gi|153953781|ref|YP_001394546.1| hypothetical protein CKL_1156 [Clostridium kluyveri DSM 555]
 gi|219854397|ref|YP_002471519.1| hypothetical protein CKR_1054 [Clostridium kluyveri NBRC 12016]
 gi|146346662|gb|EDK33198.1| FliI [Clostridium kluyveri DSM 555]
 gi|219568121|dbj|BAH06105.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 439

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 173/414 (41%), Positives = 248/414 (59%), Gaps = 9/414 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           N   Q G +  +  +   V  +  +V  G+   V+  +N +   +V+      V + P+G
Sbjct: 17  NFTYQEGIVKKVIGLTIEVEGIKAFV--GEVCNVYSEENGNIACEVVGFKEKDVILMPLG 74

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               IS G  V    R   +  S    G+V++ LG P+ G+D +  G L  E+ ++ P  
Sbjct: 75  ELIGISPGCRVVPGRRPLSVKCSEELFGKVLDGLGNPL-GEDEISSGVL-YELDAEPPDP 132

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R+R+++   TGIR ID F     GQRIG+FAGSG+GKST L M AR    D  +I+L+
Sbjct: 133 LKRKRIKQVISTGIRAIDGFLTCGEGQRIGIFAGSGVGKSTTLGMIARYAEADVNVIALI 192

Query: 196 GERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVR+FIE  LG+  LKKS++V ATSD+  ++R     TA  IAEYF  KG  V+L
Sbjct: 193 GERGREVRDFIEKDLGEEGLKKSIIVCATSDKPALVRLKGAFTATAIAEYFRDKGKKVIL 252

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S+K  G+ITA  +VL
Sbjct: 253 MMDSVTRFAMAQREIGLAVGEPPATKGYTPSVFAKLPRLMERSGMSDK--GSITAFYTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+S+SRL  +      KK  S
Sbjct: 311 VDGDDLNEPIADAVRGILDGHIVLSRSLANKNHYPAIDVLSSISRLMSEITEKSHKKSAS 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
               ++  ++ + D+  IG Y  G +  +D A++    I ++LKQ+  + SS D
Sbjct: 371 FARDMLSVYKNSEDLINIGAYIRGNNPNIDMAINYYDGIINYLKQNMDEYSSFD 424


>gi|126460779|ref|YP_001041893.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17029]
 gi|126102443|gb|ABN75121.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17029]
          Length = 436

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 167/414 (40%), Positives = 242/414 (58%), Gaps = 2/414 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           LAE  +  L  + G ++ I     +V  L Q   LGD V   G      G+V+R++   V
Sbjct: 9   LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSAHEV 68

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  E +++GD V   G   I+P   W GR+++ LG+P+DG   L +G  +  + +
Sbjct: 69  TILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P A  R+ +     TG+ V D   PL  GQRIG+FAGSG+GKS+LL+ FARS   D V
Sbjct: 128 AAPAAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187

Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I LVGERGRE+R+F E  LG   + ++VVV ATSD+SP++R+     A+ +AE+F  +G
Sbjct: 188 VIGLVGERGRELRDFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+A   GE    RG+P S    +  L ER GP  +  G+ITA
Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V SVLV G +  +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR   +A S  E
Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASTAE 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L++    L+  ++    +   G Y  G D ++D A+   P +  FL +   D
Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421


>gi|313673741|ref|YP_004051852.1| type iii secretion system atpase, flii/yscn [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940497|gb|ADR19689.1| type III secretion system ATPase, FliI/YscN [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 434

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/392 (40%), Positives = 238/392 (60%), Gaps = 6/392 (1%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVI 106
           ++  G  +  L ++I    D + + P G  E I+ G  V    +G   +  +    GR++
Sbjct: 44  LIENGSRNGILAEIIGFKDDRIVLMPYGESEGIAPGSRVRNVSYGN-SVKVTEKLLGRIL 102

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           + LG PID    +   +L   + ++ P  + R+ ++    TG++ ID    + +GQR+G+
Sbjct: 103 DGLGNPIDDKGPITDFEL-WPVYNEPPKPLEREIIKDVIPTGVKAIDGLITVGNGQRVGI 161

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSD 225
           FAGSG+GKS LL M AR+   +  +I+L+GERGREVREFIE  LG+  LK+SV+VVATSD
Sbjct: 162 FAGSGVGKSVLLGMIARNTSAEVNVIALIGERGREVREFIERDLGEEGLKRSVIVVATSD 221

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +SP++RK+    A TIAEYF S G NV+ ++DS+TRFA + REI    GE P ++GY  S
Sbjct: 222 QSPLVRKLGAFVATTIAEYFRSTGKNVMFMMDSVTRFAMAQREIGLTVGEPPTSKGYTPS 281

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF+ LP+LLER G ++K +G +T + +VLV+GD+  DPIADSVRSI+DGHIVL+R LA  
Sbjct: 282 VFALLPKLLERAG-TKKGEGAVTGLYTVLVEGDDLTDPIADSVRSIIDGHIVLSRLLAAR 340

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
             +P +D L S SRL  +  + +  +L   +  L+  + E  D+  IG Y  G +  +D 
Sbjct: 341 NHFPAIDVLMSASRLMKEIVTDEHFRLAGMMRDLMAAYNEAEDLINIGAYAKGSNKRIDT 400

Query: 406 AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           A+ ++  I  FL+Q   +        E+ KK+
Sbjct: 401 AIAKIDAINSFLRQGIDEKFDFTTTYELIKKI 432


>gi|222824465|ref|YP_002576039.1| flagellum-specific ATP synthase FliI [Campylobacter lari RM2100]
 gi|222539686|gb|ACM64787.1| flagellum-specific ATP synthase FliI [Campylobacter lari RM2100]
          Length = 436

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 160/412 (38%), Positives = 235/412 (57%), Gaps = 8/412 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDF---VVHQGKNSDNLGQVIRINLDIVYI 72
           S+NL    G I+ I+S    +  L     +GD    V  + ++ + +  V+ ++ ++ Y+
Sbjct: 12  SQNLTSVFGQITKISSTSIEINGLK--TSIGDIIKIVSSEDESKEAMAMVVEVDENLSYL 69

Query: 73  CPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P G  E   +GD  F +    +I  S    GRV++   +P DG   +      M IM  
Sbjct: 70  SPFGFVEGFKIGDRAFINDAGMQIGVSDELLGRVVDPFMRPKDGKGPIEASKF-MPIMRA 128

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
              AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  ++      +
Sbjct: 129 PIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMIVKNSKAPIKV 188

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           I+L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+++AEYF  +G +
Sbjct: 189 IALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSVAEYFKEQGKD 248

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E+ KG ITA  
Sbjct: 249 VLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG-KEEGKGTITAFF 307

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+     S + K 
Sbjct: 308 TVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVMGDIISDEHKL 367

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                  L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P +
Sbjct: 368 AARKFKRLNSLLKENEVLLRIGAYQKGTDKELDQAIAKKDFMQQFLSQNPEE 419


>gi|61219459|gb|AAX40636.1| HrpB6 [Xanthomonas oryzae pv. oryzicola]
          Length = 486

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/367 (43%), Positives = 220/367 (59%), Gaps = 5/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 107 EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 166

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 167 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 225

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 226 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 285

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 286 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 345

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S
Sbjct: 346 --MGESGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 403

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   +   +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL 
Sbjct: 404 RVMSQIVPSYHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 463

Query: 419 QSPSDLS 425
           Q    LS
Sbjct: 464 QPTDQLS 470


>gi|260778617|ref|ZP_05887509.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604781|gb|EEX31076.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 439

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 171/387 (44%), Positives = 239/387 (61%), Gaps = 16/387 (4%)

Query: 56  SDNLGQVIRINLDIVYICP----VGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGK 111
           +D   +V+ I  +  ++ P     GIG ++++ + + H  R  +       GRV++ LG 
Sbjct: 58  NDLKAEVVAIKGEEAWLSPFRSTTGIGTDMNV-EPMGHGHRVMVGEE--LLGRVVDGLGH 114

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+D  + +GK     E   + P  + R+ + K   TGIR ID    L  GQR+G+FA +G
Sbjct: 115 PMDESNWVGK---WRENHGEAPDPLKRKLISKIMPTGIRAIDSTLALGVGQRVGIFAAAG 171

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230
            GKSTLL M A     D ++++LVGERGREVREFIE  L    K K+V+VVATSD+ P+ 
Sbjct: 172 GGKSTLLGMLAGHCEADVIVLALVGERGREVREFIEYCLPPAAKEKTVLVVATSDKPPLE 231

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R  A +TA TIAEYF  +G NVLL++DS+TRFA + REI   +GE PVA G+P SVF +L
Sbjct: 232 RMKAAVTATTIAEYFRDQGKNVLLMVDSLTRFARAGREIGLAAGEPPVANGFPPSVFVQL 291

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             LLER GP+    G+ITA+ +VLV+GDN N+P+AD VRSILDGHIVL+R LA  G YP 
Sbjct: 292 ASLLERAGPAPV--GSITAIYTVLVEGDNMNEPVADEVRSILDGHIVLSRKLAGAGHYPA 349

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  ASVSR+ D+  +A  K     L HL+  ++E + +  +G Y+PG D   D+AV + 
Sbjct: 350 IDVNASVSRVMDQIVTAQHKDDAKHLRHLLSLYQEVQLLIRVGEYQPGQDPATDEAVAKF 409

Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437
             I  FL Q  ++ S    F+E  ++L
Sbjct: 410 DSIERFLCQRANEPSP---FKETLQQL 433


>gi|296133046|ref|YP_003640293.1| flagellar protein export ATPase FliI [Thermincola sp. JR]
 gi|296031624|gb|ADG82392.1| flagellar protein export ATPase FliI [Thermincola potens JR]
          Length = 440

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 158/363 (43%), Positives = 226/363 (62%), Gaps = 9/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P+G    I  G  V   G  F+I  S+   GRVI+ LG PIDG   L
Sbjct: 58  EVVGFKENRILLMPLGDLTGIGPGCEVVATGHSFKIGVSSKMLGRVIDGLGNPIDG---L 114

Query: 120 GKGDLSMEIMSKVPPA--MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           G  +   E     PP   + R+R+ +    G++ +D       GQR+G+F+GSG+GKSTL
Sbjct: 115 GPIEWETEYPVSGPPPNPLERKRITEPLSVGVKAVDGLLTCGKGQRVGIFSGSGVGKSTL 174

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREVREF+E  LG+  L++SVVVVATSD+  ++R    L
Sbjct: 175 LGMIARNTAADINVIALIGERGREVREFLEKDLGEEGLRRSVVVVATSDQPALVRLKGAL 234

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G +V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER
Sbjct: 235 VATSIAEYFRDQGKDVMLMMDSVTRFAMAQREVGLAVGEPPATRGYTPSVFALLPKLLER 294

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G IT + +VLVDGD+HN+PIAD+VR ILDGHIVL+R LA + +YP +D LAS
Sbjct: 295 SGTSRH--GTITGLYTVLVDGDDHNEPIADAVRGILDGHIVLSRDLAMQNQYPAIDILAS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+     S + +K    +  ++  + + +D+  IG Y  G +  +D A+ ++    +F
Sbjct: 353 VSRVMPDIVSEEHRKAAQEIKSILATYRDAKDLIDIGAYHKGSNPKIDYALSKLDDTLNF 412

Query: 417 LKQ 419
           LKQ
Sbjct: 413 LKQ 415


>gi|319649564|ref|ZP_08003720.1| flagellum-specific ATP synthase [Bacillus sp. 2_A_57_CT2]
 gi|317398726|gb|EFV79408.1| flagellum-specific ATP synthase [Bacillus sp. 2_A_57_CT2]
          Length = 438

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 163/386 (42%), Positives = 237/386 (61%), Gaps = 10/386 (2%)

Query: 44  CLGDF-VVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
            +GD  ++H GK        +V+    + V + P    ++IS G LV    R   +    
Sbjct: 38  SIGDVCIIHIGKGRTRRIQAEVVGFKNENVILMPYTDVQDISPGSLVETTSRPLEVKIGP 97

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPL 158
              G+ I++LG+P+DG + L KG L+  +  + PP  + R  + +  + G+R+ID    +
Sbjct: 98  ALIGKAIDSLGQPLDGGN-LPKG-LTPVLTEQTPPNPLKRPPISEPIEVGVRMIDSMLTV 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217
            +GQR+G+FAGSG+GKSTLL M AR+   D  +I+L+GERGREVREFIE  LG + LK+S
Sbjct: 156 GNGQRVGIFAGSGVGKSTLLGMIARNTNADLNVIALIGERGREVREFIERDLGPEGLKRS 215

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VV ATSD+  ++R     TA  IAEYF  KG NV+L++DS+TR A + RE+    GE P
Sbjct: 216 IVVAATSDQPALMRIKGAYTATAIAEYFRDKGLNVMLMMDSVTRVAMAQREVGLAVGEPP 275

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GY  SVF+ LP+LLER G +E   G+ITA  +VLVDGD+ N+PIAD+VR ILDGH V
Sbjct: 276 TTKGYTPSVFAVLPKLLERTGTNEY--GSITAFYTVLVDGDDMNEPIADTVRGILDGHFV 333

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R+LA +G+YP ++ L SVSR+ +    A   K    +  L+  +    D+  IG Y+ 
Sbjct: 334 LDRALANKGQYPAINVLKSVSRVMNHIADASHIKSAEKVRELLSTYINAEDLINIGAYKR 393

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423
           G  + +D+A+   P I  FLKQ  ++
Sbjct: 394 GSSMEIDEAIRLYPSIISFLKQETNE 419


>gi|295706282|ref|YP_003599357.1| flagellum-specific ATP synthase [Bacillus megaterium DSM 319]
 gi|294803941|gb|ADF41007.1| flagellum-specific ATP synthase [Bacillus megaterium DSM 319]
          Length = 437

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 164/388 (42%), Positives = 239/388 (61%), Gaps = 12/388 (3%)

Query: 43  VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100
           VC     +H  +  D +  +V+  N + V + P      I  G LV    +  ++S    
Sbjct: 42  VCF----IHLSEQGDKIRAEVVGFNGEHVVLMPYTSVRYIGPGCLVETTEKPLQVSVGKE 97

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLC 159
             G+V+++LG P+DG +      L   +  + PP  + R  +E+  + G+R ID    + 
Sbjct: 98  LIGQVLDSLGNPLDGSEF--SHYLPFVLTDQDPPNPLERPPIEQPIEVGVRTIDSLLTVG 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
            GQRIG+FAGSG+GKSTLL M AR+   D  +I+LVGERGREVREFIE  LG+  LK+SV
Sbjct: 156 QGQRIGIFAGSGVGKSTLLGMIARNTKADINVIALVGERGREVREFIERDLGEEGLKRSV 215

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVATSD+  +LR  A  TA +IAEYF ++G +V++++DS+TR A + REI    GE P 
Sbjct: 216 VVVATSDQPALLRMKAAYTATSIAEYFRNEGLSVMMMMDSVTRVAMAQREIGLAVGEPPT 275

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GY  SVF+ LPRLLER G ++   G+ITA  +VLVDGD+ N+PI+D+VR I+DGHIVL
Sbjct: 276 TKGYTPSVFASLPRLLERTGTNQH--GSITAFYTVLVDGDDMNEPISDTVRGIIDGHIVL 333

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA +G+YP ++ L SVSR+ +   S   ++    L  L+  +  + D+  IG Y+ G
Sbjct: 334 DRELANKGQYPAINVLKSVSRVMNHIVSEQHREAAGKLRSLMATYANSEDLINIGAYKRG 393

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               +D+A++  P+I  FLKQ  ++  S
Sbjct: 394 SSAYIDEAIYYHPVIDAFLKQKTNEHPS 421


>gi|254228795|ref|ZP_04922218.1| ATPase FliI/YscN family [Vibrio sp. Ex25]
 gi|262396486|ref|YP_003288339.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
 gi|151938742|gb|EDN57577.1| ATPase FliI/YscN family [Vibrio sp. Ex25]
 gi|262340080|gb|ACY53874.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
          Length = 448

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 228/367 (62%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+     I Y+ P+  +G   +   ++   G   +  SA W GRV+N LG+P+D    
Sbjct: 66  AQVVGFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSAQWLGRVLNGLGEPLDDGAP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L  +  KK++++ A +DESP++R  A L
Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               ++EYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVSEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE + G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENQHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            + ++   +   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 364 ISRCMSTCTQEAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAY 423

Query: 417 LKQSPSD 423
           L+Q+ ++
Sbjct: 424 LQQAANE 430


>gi|156976205|ref|YP_001447111.1| flagellum-specific ATP synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156527799|gb|ABU72884.1| hypothetical protein VIBHAR_04976 [Vibrio harveyi ATCC BAA-1116]
          Length = 450

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 148/367 (40%), Positives = 228/367 (62%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P D    
Sbjct: 66  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGAP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREF+E  L  +  KK+++V A +DESP++R  A L
Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE   G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR  +         + ++   L   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 364 ISRCMNACTHEAHSTIANNFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRAY 423

Query: 417 LKQSPSD 423
           L+QS ++
Sbjct: 424 LQQSANE 430


>gi|323341383|ref|ZP_08081627.1| flagellum-specific ATP synthase [Lactobacillus ruminis ATCC 25644]
 gi|323091260|gb|EFZ33888.1| flagellum-specific ATP synthase [Lactobacillus ruminis ATCC 25644]
          Length = 451

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 174/436 (39%), Positives = 244/436 (55%), Gaps = 16/436 (3%)

Query: 12  AEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           AEDY             G +S +  +      LS +V     V  +G +   L +V+   
Sbjct: 10  AEDYLYQAEHHKFYTTYGKVSEVVGLVIKAEGLSVFVGEICEVAVKGSDKVALAEVVGFV 69

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + V + P+   E I  G +V   G+    R+ P     G  ++ LG+P D  D      
Sbjct: 70  KETVLLMPLDELEGIGPGCIVKPTGKTLQVRVGPQ--LLGHTLDGLGRPFDDSDIDNDKL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   ++   P    R+R+     TG+R ID    +  GQR+G+FAGSG+GKSTLL M AR
Sbjct: 128 VDYPVIQDSPDPFRRKRISNVMPTGVRTIDGLLTVGEGQRMGIFAGSGVGKSTLLGMIAR 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D ++I L+GERGREV EFIE  LG +   KSVVV ATSD  P++R     TA  IA
Sbjct: 188 YCQADVIVIGLIGERGREVMEFIEKDLGKEGYAKSVVVCATSDTPPLVRLKGAHTATAIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G  V+L++DS+TRFA + REI  ++GE P  +GY  SVF+ELP+LLER G SEK
Sbjct: 248 EYFRDQGKKVVLMMDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFAELPKLLERSGMSEK 307

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA  +VLV+GD+ N+PIAD+VR ILDGHIVL+R +A +  YP +D   S+SRL  
Sbjct: 308 --GSITAFYTVLVEGDDMNEPIADAVRGILDGHIVLSRKIASQNHYPAIDVQVSLSRLMK 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +  S +  K    L   +  + +++D+  IG Y+ G + ++D AV     I DFLKQ   
Sbjct: 366 ELVSEEHTKDAGELRENMGVYNDSKDLIDIGAYKKGSNAVIDYAVSLHVPIEDFLKQRVE 425

Query: 423 DLSSEDVFQEITKKLQ 438
           + SS   F+E   +L 
Sbjct: 426 EYSS---FEETESRLH 438


>gi|170737022|ref|YP_001778282.1| FliI/YscN family ATPase [Burkholderia cenocepacia MC0-3]
 gi|169819210|gb|ACA93792.1| ATPase, FliI/YscN family [Burkholderia cenocepacia MC0-3]
          Length = 435

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 168/421 (39%), Positives = 244/421 (57%), Gaps = 17/421 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G +S+++ +   VT  +     G     +  ++D L  +V+     + Y+ P    E ++
Sbjct: 21  GRLSAVSGLLLEVTGYAFET--GQLARIETASNDWLDARVVGFREGVSYLMPFRPAEGLA 78

Query: 83  LGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---R 138
            G  VF   G   +S  A W GR+++ LG+PID    L  GD  +++    PP +N   +
Sbjct: 79  AGARVFGDDGARMLSIGAAWRGRIVDGLGEPIDDRGPL-VGDAVLDL---APPRVNPLRK 134

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q VE     G+R ID    L  GQR+G+FAGSG+GKS LL M AR    D V++ ++GER
Sbjct: 135 QPVEGVMDVGVRAIDGMLTLGRGQRVGLFAGSGVGKSVLLGMIARQTAADVVVVGMIGER 194

Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFIE  LG + L K++VVVA +DESP++R MA      IA +F   G++VLL++D
Sbjct: 195 GREVREFIEHSLGPEGLSKAIVVVAPADESPLMRLMATELCHAIATHFRDAGNDVLLMID 254

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REIA   GE P  RGYP SVF  LPRL+ER G  E   G+++A+ +VL +G
Sbjct: 255 SLTRYAMAQREIALALGEPPATRGYPPSVFGMLPRLVERAGNGEG-VGSMSAIYTVLAEG 313

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+  DP+ D+ R+ILDGHI+L+R LA +G YP +D L SVSR        ++   V  + 
Sbjct: 314 DDEQDPVVDTARAILDGHIMLSRDLASQGHYPAIDVLRSVSRCMSLVAPREQIDAVHKVK 373

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE----DVFQEI 433
            ++ R+   RD+  +GGY  G DL+ D AV     I  FL Q+  +++      D+  EI
Sbjct: 374 QMMSRYANVRDLIPLGGYVAGADLVTDHAVKMHDRIEAFLCQAQDEVAPRQATLDILTEI 433

Query: 434 T 434
            
Sbjct: 434 A 434


>gi|225569976|ref|ZP_03779001.1| hypothetical protein CLOHYLEM_06071 [Clostridium hylemonae DSM
           15053]
 gi|225161446|gb|EEG74065.1| hypothetical protein CLOHYLEM_06071 [Clostridium hylemonae DSM
           15053]
          Length = 435

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 152/347 (43%), Positives = 219/347 (63%), Gaps = 4/347 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R +I       GR+I+ALG PID                K+ P ++R  + +    G++ 
Sbjct: 88  RLKIPVGQFLRGRIIDALGNPIDDKGPFESERYYYVESPKINP-LSRPPISEELHFGVKA 146

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID    +  GQRIG+FAGSG+GKSTLL M AR+   D  +I+LVGERGREVREF+E  LG
Sbjct: 147 IDGLNTIGKGQRIGIFAGSGVGKSTLLGMIARNVETDINVIALVGERGREVREFVEKDLG 206

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            + +K+SV+VVATSD+  +LR   P+ A TIAEYF  +G +VLL++DS+TRFA + REI 
Sbjct: 207 PEGMKRSVLVVATSDQPAMLRMKCPIVATTIAEYFKDQGKDVLLMMDSLTRFAMAQREIG 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             +GE PVARGY  S+++E P+LLER G  + E G+IT V +VLV+GD+ N+P+AD+VR 
Sbjct: 267 LATGEPPVARGYTPSIYAEFPKLLERSG--KFENGSITGVYTVLVEGDDTNEPVADTVRG 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL+R LA    +P +D  AS+SRL     + + ++L S L  ++  +E+  D+ 
Sbjct: 325 ILDGHIVLSRKLANANHFPAIDVSASISRLMTDIVTEEHRELASKLRDILSVYEQNEDLI 384

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            IG Y+ G +  LD A+ ++  +  FL Q       +D   ++ +K+
Sbjct: 385 SIGAYKSGTNEKLDHAISKIEQVNRFLMQEIDRKYEKDEMLDVMRKI 431


>gi|291484176|dbj|BAI85251.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 438

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      I+ G +V   G   R+       G+VI+A G+P+DG   L
Sbjct: 58  EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 117 PKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  +I+LVGERGREVREFIE  LG + LK+S+VVVATSD+  ++R  A  TA
Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G
Sbjct: 237 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 297 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +       +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLK
Sbjct: 355 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414

Query: 419 Q 419
           Q
Sbjct: 415 Q 415


>gi|289663768|ref|ZP_06485349.1| type III secretion system ATPase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 442

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 154/367 (41%), Positives = 221/367 (60%), Gaps = 5/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPADGLGAV 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            + +  + + ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 -ECETWVRVQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGEDGLSRSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 242 TAIAEYFRDQGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D L S+S
Sbjct: 302 MG--ESGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +    ++ +    L  L+ ++ +   +  +G YR G D   D+A+ ++  I DFL 
Sbjct: 360 RVMSQIVPPEQSQAAGQLRRLLAKYNDVETLLQVGEYREGSDATADEAIARIDAIRDFLC 419

Query: 419 QSPSDLS 425
           Q    LS
Sbjct: 420 QPTDQLS 426


>gi|321315390|ref|YP_004207677.1| flagellum-specific ATP synthase [Bacillus subtilis BSn5]
 gi|320021664|gb|ADV96650.1| flagellum-specific ATP synthase [Bacillus subtilis BSn5]
          Length = 438

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      I+ G +V   G   R+       G+VI+A G+P+DG   L
Sbjct: 58  EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 117 PKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  +I+LVGERGREVREFIE  LG + LK+S+VVVATSD+  ++R  A  TA
Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G
Sbjct: 237 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 297 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +       +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLK
Sbjct: 355 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414

Query: 419 Q 419
           Q
Sbjct: 415 Q 415


>gi|221640831|ref|YP_002527093.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides KD131]
 gi|221161612|gb|ACM02592.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides KD131]
          Length = 436

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 168/414 (40%), Positives = 242/414 (58%), Gaps = 2/414 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           LAE  +  L  + G ++ I     +V  L Q   LGD V   G      G+V+R++   V
Sbjct: 9   LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  E +++GD V   G   I+P   W GR+++ LG+P+DG   L +G  +  + +
Sbjct: 69  TILPDGSPEGLAIGDAVALIGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             PPA  R+ +     TG+ V D   PL  GQRIG+FAGSG+GKS+LL+ FARS   D V
Sbjct: 128 AAPPAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187

Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I LVGERGRE+REF E  LG   + ++VVV ATSD+SP++R+     A+ +AE+F  +G
Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+A   GE    RG+P S    +  L ER GP     G+ITA
Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGADGTGDITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V SVLV G +  +P+AD +R +LDGH+V++R +AE GR+P +D L S+SR   +A S  E
Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSMSRALPEAASTAE 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L++    L+  ++    +   G Y  G D ++D A+   P +  FL +   D
Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421


>gi|254462370|ref|ZP_05075786.1| flagellum-specific ATP synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206678959|gb|EDZ43446.1| flagellum-specific ATP synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 447

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 155/412 (37%), Positives = 247/412 (59%), Gaps = 4/412 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G ++ + +    +  L Q   LGD V    +  D +G +VI ++ D+  I P      +S
Sbjct: 23  GTVTHVGAGLIELDGLGQNARLGDQVNLSSRMGDAMGGEVISLSKDVTIIQPDAPLTGVS 82

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           LGD     G F+ISPS  W GR+++A G P+DG   L +G+    I+   P    R+ + 
Sbjct: 83  LGDEALLDGPFQISPSDAWIGRIVDANGGPMDGR-FLPRGETPRSILGAPPNPAQRRALG 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +  +T + V +   P+  GQR+G+F+G G+GKS+LL+ FA     D ++I+L+GERGRE+
Sbjct: 142 RRLETSMSVFNTLLPIVRGQRLGLFSGFGVGKSSLLAHFASHMEADVIVIALIGERGREL 201

Query: 203 REFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           R F+E  LG   + +SV+V ATSD++P+LR+   LTA+++AE+F  +G +VL + +SITR
Sbjct: 202 RHFVETTLGKKGMARSVIVAATSDQNPLLRRRCALTAMSVAEHFRDQGKHVLFLANSITR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
            A + REIA  +GE P  RG+P S    +  L ER GP     G+ITA+ SVLV   + +
Sbjct: 262 LAEAHREIAVAAGEAPALRGFPASTSHLIMSLCERAGPGLDGGGDITALFSVLVAASDMD 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD +R +LDGH+VL+R++AE GRYP +D + SVSR   +A +  E +L+++   L+ 
Sbjct: 322 EPIADIMRGVLDGHVVLDRTIAERGRYPAIDAVRSVSRSLPEAANEKENELIATARRLLG 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            ++E   +   G Y  G D +LD A+     + +F+  +   L++++ FQ +
Sbjct: 382 AYDENALMIRAGLYNAGSDPLLDIAIKAYSELDNFIA-TLERLNTDNSFQRL 432


>gi|312792650|ref|YP_004025573.1| atpase, flii/yscn family [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312876500|ref|ZP_07736483.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796711|gb|EFR13057.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312179790|gb|ADQ39960.1| ATPase, FliI/YscN family [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 431

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 157/403 (38%), Positives = 242/403 (60%), Gaps = 17/403 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGI-- 77
           G+++ +  +  T+      V +G     +   ++ L +V+    + V + P    VG+  
Sbjct: 19  GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGVFP 76

Query: 78  GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           G ++   D +F      +       GR+++ LG+PIDG   + K  +   + ++ P  + 
Sbjct: 77  GCKVIAQDSIFE-----VKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLE 130

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +++L+GE
Sbjct: 131 RPRIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGE 190

Query: 198 RGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE++EF+E D   + LK+SVVVVATSDES + R  A   A+ IAEYF  +G +VL ++
Sbjct: 191 RGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLM 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G  +  KG+ITA+ +VLVD
Sbjct: 251 DSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSVMPKLLERAG--KNRKGSITALFTVLVD 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ +       ++L +  
Sbjct: 309 GDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVDPSHRELANET 368

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             ++  + E  D+  IG Y  G +  +D+A+  +P I  FL+Q
Sbjct: 369 KRVLAVYREAEDLINIGAYTKGSNPEIDRAIELLPRINQFLRQ 411


>gi|172057885|ref|YP_001814345.1| FliI/YscN family ATPase [Exiguobacterium sibiricum 255-15]
 gi|171990406|gb|ACB61328.1| ATPase, FliI/YscN family [Exiguobacterium sibiricum 255-15]
          Length = 437

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 156/372 (41%), Positives = 233/372 (62%), Gaps = 8/372 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           +H+G   +   +V+      V + P G    I+ G +V   G+   +       G V++ 
Sbjct: 52  IHRGDEIE--AEVVGFREGHVLLMPYGETTAIAPGSIVIATGKPLHVPVGDDLIGTVLDG 109

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+ +DG  SL     +  I+ K P  ++R R+++   TGIR ID    +  GQR+G+FA
Sbjct: 110 LGRSLDGK-SLAHLR-TTSIVRKPPSPLDRPRIDEVLSTGIRAIDGLLTVGQGQRVGLFA 167

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKSTLL M A+    D  +I+L+GERGREV+EFIE  LG+  + +S++VVATSD+ 
Sbjct: 168 GSGVGKSTLLGMIAKRSMADINVIALIGERGREVKEFIEAELGEEGMSRSIIVVATSDQP 227

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R     TA  IAEYF  +G NV+L++DS+TRFA + REI   +GE P ++GY  SVF
Sbjct: 228 PLVRLKGAYTATAIAEYFRDQGKNVVLMMDSVTRFAMAQREIGLATGEPPASKGYTPSVF 287

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP+LLER G + +  G+ITA  +VLVDGD+ N+PIAD+VR ILDGH VL+R+LA +G+
Sbjct: 288 ALLPQLLERSGKTTE--GSITAFYTVLVDGDDMNEPIADAVRGILDGHFVLDRNLANKGQ 345

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +  L S+SR+ ++  S + K    +   L+  + +  D+  IG Y+ G +  +D+AV
Sbjct: 346 YPAIHILRSISRVMNQITSTEHKDSAITFRQLLSTYLDAEDLINIGAYKSGTNPDIDRAV 405

Query: 408 HQVPIIYDFLKQ 419
            + P +  FLKQ
Sbjct: 406 EKYPELIGFLKQ 417


>gi|255767366|ref|NP_389506.2| flagellum-specific ATP synthase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|238054284|sp|P23445|FLII_BACSU RecName: Full=Flagellum-specific ATP synthase
 gi|225184993|emb|CAB13497.2| flagellar-specific ATPase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 438

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      I+ G +V   G   R+       G+VI+A G+P+DG   L
Sbjct: 58  EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 117 PKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  +I+LVGERGREVREFIE  LG + LK+S+VVVATSD+  ++R  A  TA
Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G
Sbjct: 237 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 297 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +       +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLK
Sbjct: 355 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414

Query: 419 Q 419
           Q
Sbjct: 415 Q 415


>gi|312621571|ref|YP_004023184.1| atpase, flii/yscn family [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202038|gb|ADQ45365.1| ATPase, FliI/YscN family [Caldicellulosiruptor kronotskyensis 2002]
          Length = 431

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 239/401 (59%), Gaps = 13/401 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGIGE 79
           G+++ +  +  T+      V +G     +   ++ L +V+    + V + P    VG+  
Sbjct: 19  GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGV-- 74

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
                 ++     F +       GR+++ LG+PIDG   + K  +   + ++ P  + R 
Sbjct: 75  -FPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERP 132

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +++L+GERG
Sbjct: 133 RIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERG 192

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE++EF+E D   + LK+SVVVVATSDES + R  A   A+ IAEYF  +G +VL ++DS
Sbjct: 193 RELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDS 252

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE PV+RGY  SVFS +P+LLER G  + +KG+ITA+ +VLVDGD
Sbjct: 253 LTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSITALFTVLVDGD 310

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ +       + L +    
Sbjct: 311 DFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPFHRDLANETKR 370

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           ++  + E  D+  IG Y  G +  +D+A+  VP I  FL+Q
Sbjct: 371 VLAVYREAEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQ 411


>gi|325288781|ref|YP_004264962.1| type III secretion system ATPase, FliI/YscN [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324964182|gb|ADY54961.1| type III secretion system ATPase, FliI/YscN [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 437

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 167/415 (40%), Positives = 241/415 (58%), Gaps = 9/415 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S +T +   +      V +G +       S+   +V+    +   + P+G  E +S 
Sbjct: 21  GLVSKVTGLL--IEANGPKVSVGRYCCIVSSKSEIPAEVVGFKDNKTLLMPLGELEGVSP 78

Query: 84  GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V     +  +   +   GRV++ LG P++G     K ++   + +  P A+ R RV 
Sbjct: 79  GDKVIPQKEKLAVKVGSELLGRVLDGLGNPLEGRPL--KSNIDYPLQNAPPHALLRPRVS 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+R +D    +  GQR+G+FAGSG+GKSTLL M AR+   D  +I+LVGERGRE+
Sbjct: 137 EPLSVGVRSVDGLLTIGRGQRMGIFAGSGVGKSTLLGMMARNTQADINVIALVGERGREL 196

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFIE  LG + + +SV+VVATSD+  ++R  A  TA  IAEYF   G NVLL++DS+TR
Sbjct: 197 REFIEKDLGPEGISRSVIVVATSDQPALVRIKAAFTATAIAEYFRDTGKNVLLMMDSVTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+    GE P  RGYP SVF+ LP+LLER G +  EKG+IT + +VLVDGD+HN
Sbjct: 257 FAMAQREVGLTIGEPPATRGYPPSVFAMLPKLLERAGMA--EKGSITGLYTVLVDGDDHN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD+VR ILDGHIVL+R LA    +P +D L SVSR        +   L   +  L+ 
Sbjct: 315 EPIADAVRGILDGHIVLSRDLAARNHFPSIDILQSVSRCMSDVAEPEMIGLAGKVRELLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435
            ++  +D+  IG Y  G +  +D A+  +  I  FL QS  +  +  D+  EI K
Sbjct: 375 VYQGAKDLIDIGAYVRGSNAKIDTALKYMEKITLFLCQSTDEKFNGIDMVAEIKK 429


>gi|322806989|emb|CBZ04559.1| flagellum-specific ATP synthase FliI [Clostridium botulinum H04402
           065]
          Length = 438

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 166/392 (42%), Positives = 237/392 (60%), Gaps = 9/392 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +++  KN     +V+    + V + P+G    I+ G  V   G+   +  S    G+V++
Sbjct: 49  IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P++G++ +     +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+F
Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKST L M A+    D  +I+L+GERGREVR+FIE  LG+  LKKSV+V ATSD+
Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R     TA  IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SV
Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G S K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + 
Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L+SVSRL  +  S + K        L+  ++ + D+  IG Y    +  +D A
Sbjct: 345 HYPAIDVLSSVSRLMSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKRSNPKVDMA 404

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +H    I  FLKQ    +  +  F+E T  LQ
Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433


>gi|57505593|ref|ZP_00371520.1| flagellum-specific ATP synthase [Campylobacter upsaliensis RM3195]
 gi|57016140|gb|EAL52927.1| flagellum-specific ATP synthase [Campylobacter upsaliensis RM3195]
          Length = 450

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 166/422 (39%), Positives = 237/422 (56%), Gaps = 10/422 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV---VHQGKNSDNLG 60
           +LE L +  +D  +NL    G I+ I++    +  L   V  GD V    ++ +N   L 
Sbjct: 2   SLEKLRKKLKD--ENLASVFGEITKISATNIEIQGLKTGV--GDIVRLISNENENLQTLA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +     Y+ P    E   +GD  F      +I  S    GRV++   KP DG  ++
Sbjct: 58  MVVEVKAQFSYLSPFSFIEGFKIGDRAFLSDAGMQIGVSDALLGRVVDPFMKPKDGKGAI 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M IM     AM R  +E+ F TG++ ID       GQ++G+FAGSG+GKSTL+ 
Sbjct: 118 EISKF-MPIMRSPIDAMKRGLIEEIFPTGVKTIDGLLTCGVGQKLGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M  ++      +I+L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+
Sbjct: 177 MIVKNSKAPVKVIALIGERGREIPEFIQKNLGGKLDNTVIIVATSDDSALMRKYGAFCAM 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           ++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G 
Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG- 295

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR
Sbjct: 296 KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S   K        L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q
Sbjct: 356 VMSDIISDTHKNNARKFKRLSSLLKENEVLLRIGAYQKGSDKELDEAIMKKDLMQKFLSQ 415

Query: 420 SP 421
           +P
Sbjct: 416 TP 417


>gi|29423534|gb|AAO73596.1| lateral flagellar FliI-like assembly ATPase protein [Vibrio
           parahaemolyticus]
          Length = 451

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 146/367 (39%), Positives = 227/367 (61%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P+D    
Sbjct: 68  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGMP 127

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 128 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 185

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L    + K++++ A +DESP++R  A L
Sbjct: 186 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATL 245

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 246 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 305

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE   G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 306 AGNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 365

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            + ++   +   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 366 ISRCMSTCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSY 425

Query: 417 LKQSPSD 423
           L+QS ++
Sbjct: 426 LQQSANE 432


>gi|225871930|ref|YP_002753384.1| flagellar protein export ATPase FliI [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793979|gb|ACO34069.1| flagellar protein export ATPase FliI [Acidobacterium capsulatum
           ATCC 51196]
          Length = 450

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 153/351 (43%), Positives = 220/351 (62%), Gaps = 11/351 (3%)

Query: 74  PVGIGEEISLGDLVFHWGRFRISPS----ACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
           PV     I  GD V   G   + PS        GRV+NALG+P+D   SL   D ++ + 
Sbjct: 82  PVESSSGIRYGDTVAALG---VQPSIDVGEGLIGRVLNALGQPLDRAGSLRATD-ALPLE 137

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
             VP  ++R  +     TGIR ID    +  GQR+G+F GSG+GKSTL+ M  R+   D 
Sbjct: 138 RAVPHPLDRTPIRMPLGTGIRAIDSMLTVGRGQRVGIFGGSGVGKSTLIGMMTRNSDADV 197

Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           +++ LVGERGREV EF+ED LG +  K+SVVVV+TSD++P+LR  A L A T+AEYF+ +
Sbjct: 198 IVVGLVGERGREVGEFLEDSLGPEGRKRSVVVVSTSDQTPLLRMRAALAATTVAEYFADQ 257

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL+LDS+TRFA + RE+   +GE P A+GY  SVFS L +L+ER G  +  +G+IT
Sbjct: 258 GKHVLLVLDSLTRFAMAAREVGLAAGEPPTAKGYTPSVFSRLAQLVERAG--QFREGSIT 315

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A  +VL++GD+  D + D+VRS LDGH+VL+R+LA +G YPP++ L S+SRL     S +
Sbjct: 316 AFYTVLMEGDDQQDTLVDAVRSYLDGHVVLSRTLASQGWYPPIELLDSISRLMPSVASGE 375

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   +++  ++  +  + D+  IG Y+ G D  LD A+     +  FL Q
Sbjct: 376 HRGAAATVRRMLAAYARSEDLVRIGAYKAGTDPELDDALRTREAVRAFLMQ 426


>gi|91223214|ref|ZP_01258480.1| putative flagellum-specific ATP synthase [Vibrio alginolyticus
           12G01]
 gi|91192027|gb|EAS78290.1| putative flagellum-specific ATP synthase [Vibrio alginolyticus
           12G01]
          Length = 448

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 146/367 (39%), Positives = 229/367 (62%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+     I Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P+D    
Sbjct: 66  AQVVGFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVLNGLGEPLDDGAP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L  +  KK++++ A +DESP++R  A L
Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               ++EYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVSEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE + G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENQHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR  +         + ++   +   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 364 ISRCMNTCTQDAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAY 423

Query: 417 LKQSPSD 423
           L+Q+ ++
Sbjct: 424 LQQAANE 430


>gi|28901388|ref|NP_801043.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260362942|ref|ZP_05775811.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|260880229|ref|ZP_05892584.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|260895346|ref|ZP_05903842.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|260901171|ref|ZP_05909566.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|28809935|dbj|BAC62876.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308085703|gb|EFO35398.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|308091672|gb|EFO41367.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|308109341|gb|EFO46881.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|308112402|gb|EFO49942.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|328469322|gb|EGF40268.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus
           10329]
          Length = 449

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 146/367 (39%), Positives = 227/367 (61%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P+D    
Sbjct: 66  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGMP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L    + K++++ A +DESP++R  A L
Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE   G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            + ++   +   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 364 ISRCMSTCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSY 423

Query: 417 LKQSPSD 423
           L+QS ++
Sbjct: 424 LQQSANE 430


>gi|170738290|ref|YP_001779550.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
 gi|169820478|gb|ACA95060.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
          Length = 449

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 250/427 (58%), Gaps = 6/427 (1%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYIC 73
           D + +L  +G  + ++ ++        +Y  L +    QG+      +V+  + D   + 
Sbjct: 26  DRAAHLSTRGKVMDALGTLIRVSGIDVRYGELCELRTGQGELM-QCAEVVGFSRDTALLS 84

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P G  + +S    V    R   I   +   GRV++++G+PIDG   +   + +  + +  
Sbjct: 85  PFGRLDGLSRDTQVVALRRPLAIPVGSALFGRVVDSMGRPIDGRGPIDTTE-TAALYAAP 143

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P AM+R  +E+   TG+RV+D    L  GQR+G+FA +G+GKSTL+ MFAR    D  +I
Sbjct: 144 PDAMSRPLLERSLDTGVRVVDGLMTLGEGQRVGIFAPAGVGKSTLMGMFARGTRCDLNVI 203

Query: 193 SLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFIE  LG + + +S+VV ATSD S I R  A  +A  IAEYF  +G  
Sbjct: 204 ALIGERGREVREFIEQILGPEGIARSIVVCATSDRSSIERVKAAYSATAIAEYFRDRGKR 263

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G S  E G+ITA+ 
Sbjct: 264 VLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGLS--EHGSITALY 321

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL + ++ +DP+A+ VR ILDGH++L+R +A   +YP +D LAS+SR+  +      ++
Sbjct: 322 TVLAEDESGSDPVAEEVRGILDGHMILSREIAARNQYPAIDVLASLSRVMPQVTDDAHRE 381

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               +  L+ +  +   +  +G YR G D + D+AV ++  I  FL Q   + S+ +  +
Sbjct: 382 AAGHVRRLLAKHRDIETLLQLGEYRAGGDPVADEAVRKIEAIRQFLCQRTDEFSTREATR 441

Query: 432 EITKKLQ 438
           +  + L+
Sbjct: 442 DALRGLR 448


>gi|258404705|ref|YP_003197447.1| flagellar protein export ATPase FliI [Desulfohalobium retbaense DSM
           5692]
 gi|257796932|gb|ACV67869.1| flagellar protein export ATPase FliI [Desulfohalobium retbaense DSM
           5692]
          Length = 435

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 159/404 (39%), Positives = 244/404 (60%), Gaps = 16/404 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G +++I  V     C +  V +G    +V +G  S    +V+     +  + P+G    +
Sbjct: 20  GKVTNIVGVLVQGYCPN--VSVGSLCEIVPEGGESPVQAEVVGFRDAMALLMPLGELRGL 77

Query: 82  SLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAM 136
           + G+L+         P      GRV++A+G PIDG     KG LS+     I ++ P  M
Sbjct: 78  APGNLIKVLDSSATLPVGEDMLGRVLDAMGYPIDG-----KGPLSLPRSRMIYAQPPGPM 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R ++      G+  I+       GQR+ + AGSG+GKSTL+ M AR       +I+L+G
Sbjct: 133 ERAQISVPLDVGVSSINGLLTCGLGQRLAIMAGSGVGKSTLMGMIARDSKASINVIALIG 192

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE+ LG + LK+SVV+VATSD+SP+LR      A  +AE+F+ +G++V+LI
Sbjct: 193 ERGREVREFIENDLGPEGLKRSVVIVATSDQSPVLRMRGAFAATAVAEHFADQGEDVMLI 252

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + REI    GE P  +GYP SVF++LP+ LER G + K+ G+IT + +VLV
Sbjct: 253 MDSVTRYAMANREIGLAVGEPPTTKGYPPSVFAKLPKFLERAG-NFKKGGSITGLYTVLV 311

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+P+AD+VRSILDGHIVL+R LA +  YPP+D L S SRL  +    +  +  + 
Sbjct: 312 EGDDMNEPVADTVRSILDGHIVLDRRLANKNHYPPIDVLQSASRLMRQVVDEEHLQYSAQ 371

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           + +++  + E+ D+  IG Y PG +  LD A++++  + +FL Q
Sbjct: 372 IQNVLATYRESEDLVTIGAYTPGTNRALDDALNRIESVNEFLTQ 415


>gi|291562024|emb|CBL40839.1| type III secretion system ATPase, FliI/YscN [butyrate-producing
           bacterium SS3/4]
          Length = 433

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 151/345 (43%), Positives = 221/345 (64%), Gaps = 5/345 (1%)

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I+ G  V + G R +I       GR+INALG PID       G L     + + P +NR 
Sbjct: 76  ITAGSFVRNTGCRLQIPVGDFLKGRIINALGHPIDEKGEFPPGKLYTVDSAYINP-LNRP 134

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            + +  + GI+ ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+LVGERG
Sbjct: 135 PIREHLEFGIKAIDGLNTIGKGQRMGIFAGSGVGKSTLMGMIARNVKTDINVIALVGERG 194

Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV EF++  LG+  +K+SV++VATSD+  +LR   PL A TIAEYF  +G +VLL++DS
Sbjct: 195 REVLEFVKKDLGEEGMKRSVLIVATSDQPAMLRMKCPLVATTIAEYFRDQGADVLLMMDS 254

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REI    GE P+ARGY  S+++E PRLLER G     KG+IT + +VLV+GD
Sbjct: 255 LTRYAMAQREIGLAIGEPPIARGYTPSIYAEFPRLLERSG--NFAKGSITGIYTVLVEGD 312

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD+VR ILDGHIVL+R LA    +P +D  AS+SRL +     + +K  S   +
Sbjct: 313 DTNEPVADTVRGILDGHIVLSRQLANANHFPAIDISASISRLMNDIAGEEHRKAASRFRN 372

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           ++  +++  D+  IG Y+ G +  LD+AV ++  +  FL+Q  ++
Sbjct: 373 MLSLYQKNADLISIGAYKKGANSALDEAVDRIGDMNKFLEQETNE 417


>gi|153835939|ref|ZP_01988606.1| FliIL [Vibrio parahaemolyticus AQ3810]
 gi|149750693|gb|EDM61438.1| FliIL [Vibrio parahaemolyticus AQ3810]
          Length = 449

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 146/367 (39%), Positives = 227/367 (61%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P+D    
Sbjct: 66  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGIP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L    + K++++ A +DESP++R  A L
Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE   G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            + ++   +   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 364 ISRCMSTCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSY 423

Query: 417 LKQSPSD 423
           L+QS ++
Sbjct: 424 LQQSANE 430


>gi|315639098|ref|ZP_07894265.1| flagellum-specific ATP synthase FliI [Campylobacter upsaliensis
           JV21]
 gi|315480802|gb|EFU71439.1| flagellum-specific ATP synthase FliI [Campylobacter upsaliensis
           JV21]
          Length = 452

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 166/422 (39%), Positives = 237/422 (56%), Gaps = 10/422 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV---VHQGKNSDNLG 60
           +LE L +  +D  +NL    G I+ I++    +  L   V  GD V    ++ +N   L 
Sbjct: 2   SLEKLRKKLKD--ENLASVFGEITKISATNIEIQGLKTGV--GDIVRLISNENENLQTLA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +     Y+ P    E   +GD  F      +I  S    GRV++   KP DG  ++
Sbjct: 58  MVVEVKAQFSYLSPFSFIEGFKIGDKAFLSDAGMQIGVSDALLGRVVDPFMKPKDGKGAI 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M IM     AM R  +E+ F TG++ ID       GQ++G+FAGSG+GKSTL+ 
Sbjct: 118 EISKF-MPIMRSPIDAMKRGLIEEIFPTGVKTIDGLLTCGVGQKLGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M  ++      +I+L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+
Sbjct: 177 MIVKNSKAPVKVIALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAM 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           ++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G 
Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG- 295

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR
Sbjct: 296 KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S   K        L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q
Sbjct: 356 VMSDIISDTHKNNARKFKRLSSLLKENEVLLRIGAYQKGSDKELDEAIMKKDLMQKFLSQ 415

Query: 420 SP 421
           +P
Sbjct: 416 TP 417


>gi|152997448|ref|YP_001342283.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1]
 gi|150838372|gb|ABR72348.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1]
          Length = 443

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 161/392 (41%), Positives = 234/392 (59%), Gaps = 4/392 (1%)

Query: 32  VYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
           V  T+  +   V LGD   V   K+     +V+    D+ Y+ P    E IS G  V   
Sbjct: 31  VGLTMEAVGCVVALGDRCSVQVRKDRWVESEVVGFTGDLTYLMPTEAIEGISPGARVRPL 90

Query: 91  -GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            G  ++       GRV+N LGKP+DG   +   D S+ +   V   + R+ + +    GI
Sbjct: 91  LGDSKMPVGDELLGRVVNGLGKPLDGKGPIKTKD-SVTLHGNVINPLQRKPISEPLDVGI 149

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           + I+    +  GQR+G+FAGSG+GKS LL M  +    D  ++ L+GERGREV+EFI+  
Sbjct: 150 KAINSLLTVGKGQRLGLFAGSGVGKSMLLGMMTKFTEADITVVGLIGERGREVKEFIDQI 209

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG+  L +SVVV + +D+S ++R  A + A  IAEY+  +G NVLL++DS+TR+A + RE
Sbjct: 210 LGEEGLSRSVVVASPADDSALMRLRAAMLATRIAEYYRDQGKNVLLLMDSLTRYAQAQRE 269

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA + GE P  +GYP SVFS+LP+L+ER G   +  G++TA  +VL +GD+  DPIAD+ 
Sbjct: 270 IALSVGEPPATKGYPPSVFSKLPQLVERAGNGCEGSGSVTAFYTVLTEGDDQQDPIADAS 329

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+R LAEEG YP +D  AS+SR      S D       +  L  +F++ +D
Sbjct: 330 RAILDGHIVLSRRLAEEGHYPAIDIEASISRAMPHIVSEDHLYGAMRVKQLYSKFQQNQD 389

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +G Y  G D  LD+A+ Q+P I +FL+QS
Sbjct: 390 LISVGAYARGSDPDLDQAIIQMPEIRNFLQQS 421


>gi|292669729|ref|ZP_06603155.1| flagellar protein export ATPase FliI [Selenomonas noxia ATCC 43541]
 gi|292648526|gb|EFF66498.1| flagellar protein export ATPase FliI [Selenomonas noxia ATCC 43541]
          Length = 461

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 164/373 (43%), Positives = 228/373 (61%), Gaps = 14/373 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127
           V + PVG  + I  G  V   GR  R+       GRV++ LG PIDG   +    L+ E 
Sbjct: 80  VLLMPVGEMQGIGPGCEVIATGRRLRVKVGEELLGRVLDGLGNPIDGKGPI----LAQEE 135

Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + +  PP + R R+      G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+ 
Sbjct: 136 YPLQAPPPPPLTRPRIHDNLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNT 195

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+LVGERGREVR+FIE  LG + LK+SVVVVATSD+  ++R    +T   IAEY
Sbjct: 196 EADISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEY 255

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G S  E+
Sbjct: 256 FRDQGHKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--ER 313

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L SVSR+  + 
Sbjct: 314 GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEV 373

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                 +    +  L+  + E  D+  IG Y  G    +D A+ ++  I +FL+Q   ++
Sbjct: 374 VDKSHLEAAQEMRQLMAVYAEAEDLIHIGAYVKGSSPKIDAAIQKIDGINEFLRQDIYEV 433

Query: 425 SSEDVFQEITKKL 437
           +S   ++E  ++L
Sbjct: 434 TS---YEETEQQL 443


>gi|303240285|ref|ZP_07326804.1| flagellar protein export ATPase FliI [Acetivibrio cellulolyticus
           CD2]
 gi|302592195|gb|EFL61924.1| flagellar protein export ATPase FliI [Acetivibrio cellulolyticus
           CD2]
          Length = 438

 Score =  279 bits (713), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 159/370 (42%), Positives = 223/370 (60%), Gaps = 13/370 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    I  G  V   G +   +   C  GRVI+ LG PIDG     KGDL +E 
Sbjct: 69  VILMPLGDMTGIGPGSTVVATGEYLSAAVGNCMVGRVIDGLGNPIDG-----KGDLKVET 123

Query: 129 MSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              V    P  + R R+      G++ ID    +  GQR+G+FAGSG+GKSTL+ M AR+
Sbjct: 124 SYPVNNDPPHPLMRNRINDPLPLGVKTIDGLLTIGKGQRVGIFAGSGVGKSTLIGMIARN 183

Query: 185 DCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+L+GERGREVREFIE D   + L +SVVVVATSD+  ++R      A  IAE
Sbjct: 184 TKADINVIALIGERGREVREFIEKDLKEEGLSRSVVVVATSDQPALVRLKGAFIATAIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G S  +
Sbjct: 244 YFRDQGKDVLLLMDSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSSMPKLLERAGNS--Q 301

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT + +VLVDGD+  +P+ D+ R ILDGHIVL+R+LA   +YP +D LASVSR+   
Sbjct: 302 SGSITGLYTVLVDGDDLTEPVTDTARGILDGHIVLSRALANRNQYPAIDVLASVSRVMSD 361

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             +++ KK+ + +  ++    +  D+  IG Y  G +  +D A+  +  I +F++Q   D
Sbjct: 362 IVTSEHKKIANQMKKVMAIHRDAEDLINIGAYVKGSNEKIDYAIAHIDKILEFIEQGTHD 421

Query: 424 LSSEDVFQEI 433
             S D   E+
Sbjct: 422 NYSFDEVVEL 431


>gi|91200226|emb|CAJ73270.1| strongly similar to flagellar ATPase fliI [Candidatus Kuenenia
           stuttgartiensis]
          Length = 439

 Score =  279 bits (713), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 156/374 (41%), Positives = 229/374 (61%), Gaps = 16/374 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127
           + + P+G  E I  G+ V   G    +       GR++  LG+P+DG     KG L++E 
Sbjct: 71  ILLMPIGELERIGPGNRVTASGSPLTVGVGMGLMGRILGGLGEPMDG-----KGPLNVEE 125

Query: 128 ---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              I +  P  + R R+++  +TG+R ID       GQR+G+FAGSG+GKSTL+ M AR+
Sbjct: 126 RVSIYNSPPDPLTRSRIKEVLETGVRAIDGMLTFGQGQRLGIFAGSGVGKSTLMGMIARN 185

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              +  +I+L+GERGREVREF+E  LG + +KKSV+V  TSD+  +LR      A +IAE
Sbjct: 186 SGAEVNVIALIGERGREVREFVEKNLGEEGMKKSVIVSVTSDKPALLRVKGAYIASSIAE 245

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G  VLL++DS+TRFA++ REI    GE P ++GY  SVF+ LP+LLER G     
Sbjct: 246 YFRDRGMRVLLMMDSVTRFANAQREIGLAIGEPPTSKGYTPSVFALLPKLLERSGTG--T 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT + +VLVDGD+ N+PIAD+VR ILDGH+VL+R++A +  YP +D + SVSR  D 
Sbjct: 304 KGSITGLYTVLVDGDDMNEPIADAVRGILDGHVVLSRAMASQNHYPAIDIMESVSRCMDD 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + + +K    L  +   ++E  D+  IG Y  G +  +D A+  +  I ++LKQ   D
Sbjct: 364 IITGEHRKAAQMLKAVYATYKEAEDMINIGAYAKGGNKKIDYALSVIDAINEYLKQ---D 420

Query: 424 LSSEDVFQEITKKL 437
           +++   F E   KL
Sbjct: 421 MTTNGNFNESISKL 434


>gi|254486056|ref|ZP_05099261.1| flagellum-specific ATP synthase [Roseobacter sp. GAI101]
 gi|214042925|gb|EEB83563.1| flagellum-specific ATP synthase [Roseobacter sp. GAI101]
          Length = 445

 Score =  278 bits (712), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 234/390 (60%), Gaps = 3/390 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ +      V+ L    CLGD V + +   SD  G++++++  I+        + ++
Sbjct: 24  GRITLVDQGAVQVSGLGTEACLGDRVKIRRRSGSDLFGEIVQLDGTILTALLENAPDGVA 83

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           + D VF      I PS  W GRVI++ G P+DG   L  G  +  + +  P A  R+ + 
Sbjct: 84  VHDRVFLASAGEIFPSPQWIGRVIDSSGHPLDGK-PLPCGPQAQPLRASPPGAAERKPLG 142

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +  +TG+ + +   P+  GQR+G+FAGSGIGKSTLL   A     D V+I++VGERGREV
Sbjct: 143 QRLETGLEITNTLLPIVEGQRVGLFAGSGIGKSTLLGTLASKMQADVVVIAMVGERGREV 202

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           R FI+D LG + L ++VVV ATSD+S +LR+    TA+ +AE+F  +G +VL + DS+TR
Sbjct: 203 RHFIDDVLGPEGLARTVVVAATSDQSALLRRRCAWTAMAVAEFFRDQGKSVLFLADSVTR 262

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + REIA +SGE PV RGYP S    + +L ER GP    +GNIT + SVLV G + +
Sbjct: 263 FAEAHREIAVSSGEAPVLRGYPPSTAHMIMQLCERAGPGHLGQGNITGLFSVLVAGSDMD 322

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD +R +LDGHI+L+R++AE GR+P +D L SVSR    A +  E K++  +  ++ 
Sbjct: 323 EPIADILRGVLDGHIILDRAIAERGRFPAIDVLRSVSRSLPAAATEGENKILKQVRKILG 382

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
            +E    +   G Y  G D  +D+++   P
Sbjct: 383 VYERNSMMISAGLYTSGSDPEIDQSIALWP 412


>gi|192362186|ref|YP_001982194.1| flagellum-specific ATP synthase [Cellvibrio japonicus Ueda107]
 gi|190688351|gb|ACE86029.1| flagellum-specific ATP synthase FliI [Cellvibrio japonicus Ueda107]
          Length = 476

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 152/373 (40%), Positives = 227/373 (60%), Gaps = 12/373 (3%)

Query: 55  NSDNL---GQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRFRISPSACWCGRVIN 107
           NSDN     +V+    D V++ PV   E +  G  V       G  RI P     GRVIN
Sbjct: 69  NSDNRRIEAEVVGFAGDKVFLMPVKRVEGLQPGARVIPVAGQMG-MRIGPQ--LLGRVIN 125

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +G+P+D    L  GD  ++   +    + R  + +    G+R I+    +  GQR+G+F
Sbjct: 126 GIGQPLDAKGPLA-GDEYLDFNPRDINPLQRHPISETLDVGVRAINALITVGRGQRLGLF 184

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           AGSG+GKS L+ M  +    D V++ L+GERGREV+EFI+  LG+  L+++VVV + +D+
Sbjct: 185 AGSGVGKSVLMGMMTKFTTADIVVVGLIGERGREVKEFIDHILGEEGLRRAVVVASPADD 244

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           +P++R  A L A  IAEY+  +G NVLL++DS+TRFA + REIA   GE P  +GYP SV
Sbjct: 245 APLMRLRASLLASRIAEYYRDQGQNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSV 304

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+++P+L+ER G + + +G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAEEG
Sbjct: 305 FAKIPQLVERAGNAAEGEGSITAFYTVLTEGDDLQDPIADSARAILDGHVVLSRRLAEEG 364

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D  +S+SR        +  K++     L+ R+++ RD+  IG Y  G D   D A
Sbjct: 365 VYPAIDVESSISRAMQNIVDDEHLKMMQRFKQLLARYQQNRDLIAIGAYTQGADPETDAA 424

Query: 407 VHQVPIIYDFLKQ 419
           + + P +  F++Q
Sbjct: 425 IERFPHLRAFIQQ 437


>gi|224825759|ref|ZP_03698863.1| ATPase, FliI/YscN family [Lutiella nitroferrum 2002]
 gi|224601983|gb|EEG08162.1| ATPase, FliI/YscN family [Lutiella nitroferrum 2002]
          Length = 436

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 159/367 (43%), Positives = 223/367 (60%), Gaps = 16/367 (4%)

Query: 61  QVIRINLDIVYICP----VGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           QV+    ++ Y+ P    VG+     +       G F I PS  W GR++N LG+P+DG 
Sbjct: 57  QVVGFKREVSYLMPFKKPVGLTTGARVQPAPDAAGLF-IGPS--WLGRIVNGLGEPLDGL 113

Query: 117 DSLGKGDLSMEIMSKVPPAMN--RQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
             LG        ++  PP +N  R+R V+     G+R I+    L  GQR+G+FAGSG+G
Sbjct: 114 GRLG----GEHPLAAHPPRVNPLRKRPVDTPLDVGVRAINGLLTLGRGQRVGLFAGSGVG 169

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           KS LL M  R    D V++ L+GERGREVREF+E  LG + L K+V+VVA +DESP++R 
Sbjct: 170 KSVLLGMITRHTEADVVVVGLIGERGREVREFVEHALGAEGLAKAVLVVAPADESPLMRL 229

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A     TIA +F  +G +VLL++DS+TR+A + RE+A   GE P  RGYP SVF  LP 
Sbjct: 230 KATELTHTIAAHFRDQGRHVLLLVDSLTRYAMAQREVALALGEPPATRGYPPSVFGLLPT 289

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L E  G  E E G+++A+ +VL +GD+  DP+ D+ R+ILDGHIVL+R LAE G YP +D
Sbjct: 290 LAESAGNGEGE-GSMSAIYTVLAEGDDQQDPVVDTARAILDGHIVLSRGLAERGHYPAID 348

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             ASVSR         +++   +L  L  R++E R +  +GGY PG D   D+AV ++P+
Sbjct: 349 IAASVSRCMGLVAGVSQREAARTLRGLWARYQEVRALIPLGGYVPGADAETDRAVQRMPL 408

Query: 413 IYDFLKQ 419
           I  FL+Q
Sbjct: 409 IERFLRQ 415


>gi|325109015|ref|YP_004270083.1| type III secretion system ATPase, FliI/YscN [Planctomyces
           brasiliensis DSM 5305]
 gi|324969283|gb|ADY60061.1| type III secretion system ATPase, FliI/YscN [Planctomyces
           brasiliensis DSM 5305]
          Length = 442

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 164/379 (43%), Positives = 234/379 (61%), Gaps = 13/379 (3%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD---LVFHWGRFRISPSACWCGRVI 106
           +  G+      +VI +  D + + P G    I  GD   LV    R R+       GRVI
Sbjct: 47  IEAGQRQGIDAEVIGLEDDEIILQPYGELAGIKRGDTVRLVHSAQRIRVGDR--LLGRVI 104

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           NA G+ IDGD      +  M   + + P + R R+ +  +TG+R ID       GQR+G+
Sbjct: 105 NARGEFIDGDLPPVLPESLMLQNAPIAP-LQRPRITERLETGVRAIDSLLTCGQGQRLGI 163

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           FAGSG+GKSTLL   AR    D  ++ LVGERGREVREF+E  LG+   ++SV+VVATS+
Sbjct: 164 FAGSGVGKSTLLGQLARYASADVNVVVLVGERGREVREFLERDLGEEGRRRSVLVVATSE 223

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           ES +LR+        +AEYF  +G NVLL++DS+TR+A + REI   +GE P  RGYP S
Sbjct: 224 ESALLRRQCANVGTAVAEYFRDQGKNVLLMMDSVTRYALAQREIGLAAGEPPATRGYPPS 283

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF+ LPRLLER G    E+G+IT + +VLV+GD+ N+PIAD+VR ILDGHIVL+R LA +
Sbjct: 284 VFALLPRLLERSG--RTERGSITGLYTVLVEGDDTNEPIADTVRGILDGHIVLSRDLAHK 341

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             +P +D L S+SRL ++   ADE  L ++  L  L+  + ++ D+  IG Y+ G + ++
Sbjct: 342 AHWPAIDILGSISRLMNEL--ADETHLAAARQLKQLMAAYRQSEDLINIGAYQHGSNRVV 399

Query: 404 DKAVHQVPIIYDFLKQSPS 422
           D+A+   P I +FL+Q+ +
Sbjct: 400 DRAIQLKPRIDEFLQQTST 418


>gi|307722059|ref|YP_003893199.1| flagellar protein export ATPase FliI [Sulfurimonas autotrophica DSM
           16294]
 gi|306980152|gb|ADN10187.1| flagellar protein export ATPase FliI [Sulfurimonas autotrophica DSM
           16294]
          Length = 435

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 10/425 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73
           +KN  V  G +  I +   T   L  +V + D V  V      + +G V  I+ D+ +I 
Sbjct: 12  NKNYSVSFGEVVKINATIITAKGL--HVSISDMVKIVSDTTGQETVGMVTEIDADLFFIT 69

Query: 74  PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P    E    GD VF       I       GRV++   +PIDG  S+    L+  I + +
Sbjct: 70  PFSFVEGFRSGDKVFLDATGLNIPVGPALLGRVVDPFMRPIDGKGSVKDAKLAPIIKAPI 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
             AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       ++
Sbjct: 130 A-AMKRGMIDEVFSVGVKSIDGLLSCGKGQKLGIFAGSGVGKSTLMGMIVRGADAPIKVV 188

Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           +L+GERGREV EFIE  LG +L  +V+VVATSD+SP++RK     A+++AEYF  +G +V
Sbjct: 189 ALIGERGREVPEFIEKNLGGDLTNTVIVVATSDDSPLMRKYGAFAAMSVAEYFKDQGRDV 248

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E+ KG+ITA  +
Sbjct: 249 LFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGKGSITAFFT 307

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL++GD+ +DPIAD  RSILDGHIVL+R + + G YPPV  L S SR+     +    K 
Sbjct: 308 VLIEGDDMSDPIADQSRSILDGHIVLSREMTDFGIYPPVHILNSASRVMSDIITPQHLKA 367

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           V     L    +E   +  IG Y  G D  LD+A+++   +  F+ Q+ +  +S   F E
Sbjct: 368 VMKFRRLYTLLKENETLIRIGAYTQGSDAELDEAINKKEDMEAFITQNSTVQTS---FSE 424

Query: 433 ITKKL 437
            ++ L
Sbjct: 425 TSQAL 429


>gi|153831717|ref|ZP_01984384.1| FliIL [Vibrio harveyi HY01]
 gi|148872227|gb|EDL71044.1| FliIL [Vibrio harveyi HY01]
          Length = 449

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 228/367 (62%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P D    
Sbjct: 66  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGAP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREF+E  L  +  KK+++V A +DESP++R  A L
Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+   G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSDNPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR  +         + ++   L   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 364 ISRCMNACTHEAHSTIANNFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRAY 423

Query: 417 LKQSPSD 423
           L+QS ++
Sbjct: 424 LQQSANE 430


>gi|315127316|ref|YP_004069319.1| flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913]
 gi|315015830|gb|ADT69168.1| flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913]
          Length = 444

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 213/332 (64%), Gaps = 6/332 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GRV++ LG+P+DG   LGK   + +++        + R+ + K    G+R I+    
Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHTLKFAQNAINPLARRPISKPMDVGVRAINSVIT 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           +  GQR+G+FAGSG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG +  K+
Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGVEGRKR 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVV A +D SP++R     +AVTIAEYF  +G NVLL+LDS+TR+A + REIA   GE 
Sbjct: 220 SVVVAAPADASPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI
Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGSITAFFTVLSEGDDMQDPIADAARAILDGHI 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LA+ G YP +D   S+SR+  +  S    +    L  +   +++ +D+  +G Y+
Sbjct: 340 VLSRDLADSGHYPAIDIEKSISRVMPQVVSESHMQQARVLKQVYSMYQQNKDMITLGAYQ 399

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            G D +LD+A++ +P +  FL+Q   D+ S D
Sbjct: 400 KGSDQMLDQAINMMPRVNAFLQQGMRDVISYD 431


>gi|126665012|ref|ZP_01735995.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17]
 gi|126630382|gb|EBA00997.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17]
          Length = 479

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/401 (39%), Positives = 234/401 (58%), Gaps = 10/401 (2%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
           V  T+ C+   + +GD  V Q + S  +  +V+    + VY+ P+   E +  G LV   
Sbjct: 48  VGLTLECVGVPMVVGDRCVIQSQGSSVVEAEVVGFEDEKVYLMPLTAIEGLRPGALVVPL 107

Query: 91  GRF-RISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFK 146
               R+       GRV++  G+P+DG   L    +  LS +I++     +NR  V +   
Sbjct: 108 SSTSRVPVGNQLLGRVVDGSGEPLDGKGPLHAEARVSLSGDIINP----LNRAPVRQPMD 163

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
            GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGREV+EFI
Sbjct: 164 VGIRAINALLTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADVTVVGLIGERGREVKEFI 223

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           ED LG+  L +SVVV + +D+SP++R  A +    IAE++  +G  VLL++DS+TR+A +
Sbjct: 224 EDILGEEGLARSVVVASPADDSPLMRLRAAMLTTRIAEFYRDQGKRVLLLMDSLTRYAQA 283

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            REIA   GE P  +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+  DPIA
Sbjct: 284 QREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIA 343

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+ R+ILDGHIVL+R LAEEG YP +D  AS+SR+  +    +          +  R+++
Sbjct: 344 DAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTEPEHFARAQRFKQVYSRYQQ 403

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            RD+  +G Y  G D   D A+  +  +  FLKQ  S+ +S
Sbjct: 404 ARDLISVGAYVKGSDPETDFAIAHIANMRQFLKQGLSEKTS 444


>gi|54307262|ref|YP_128282.1| putative FliI, flagellum-specific ATP synthase [Photobacterium
           profundum SS9]
 gi|46911682|emb|CAG18480.1| Putative FliI, flagellum-specific ATP synthase [Photobacterium
           profundum SS9]
          Length = 446

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/338 (42%), Positives = 210/338 (62%), Gaps = 3/338 (0%)

Query: 84  GDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  VF   G  +I+      GRV+N LG+P+D    +   D  + +  +    + R  + 
Sbjct: 88  GSRVFPLHGDSKINVGYSMLGRVLNGLGEPLDSRGPI-TADQRINLQGETINPLQRLPIS 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
                G+RVI+    +  GQR+G+FAGSG+GKS LL M  R+   +  ++ L+GERGREV
Sbjct: 147 TQLDVGVRVINSMLSVGKGQRMGLFAGSGVGKSVLLGMMTRNTTAEITVVGLIGERGREV 206

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFIE  LG + +K +VV+ + +D+ P++R  A +    IAE+F  +G +VLL++DS+TR
Sbjct: 207 REFIEHSLGPEGMKNAVVIASPADDPPLMRLRASMLCHRIAEFFRDQGHDVLLLMDSLTR 266

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA   GE P  +GYP SVFS LP+L+ER G    EKG+ITA  +VL +GD+  
Sbjct: 267 YAQAQREIALAVGEPPATKGYPPSVFSMLPQLVERAGNGATEKGSITAFYTVLSEGDDQQ 326

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIAD+ R+ILDGHIVLNR LAE+G YP +D   S+SR   +  + ++ +    +  L  
Sbjct: 327 DPIADAARAILDGHIVLNRELAEQGHYPAIDIEQSISRAMPQVVTPEQLQKAQQVKQLYA 386

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           R+ + +D+  +GGY+ G D  LD AVH  P I DFL+Q
Sbjct: 387 RYRQVQDLISLGGYQQGQDQNLDMAVHYYPEICDFLQQ 424


>gi|312602777|ref|YP_004022622.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           rhizoxinica HKI 454]
 gi|306431580|emb|CBK52132.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           rhizoxinica HKI 454]
 gi|312170091|emb|CBW77103.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           rhizoxinica HKI 454]
          Length = 459

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 166/422 (39%), Positives = 239/422 (56%), Gaps = 13/422 (3%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYIC 73
           S   + + G +  +      V  L   V LG+    +  +   L   +VI    D+  + 
Sbjct: 36  STRAIARNGKVLEVIGTLVKVGGLD--VTLGELCELRAADGSLLQHAEVIGFTRDVALLS 93

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMS 130
           P    E IS    V   GR   +       GRVI++LG+PIDG    G  D + E  I +
Sbjct: 94  PFSRLESISRSTRVIGLGRPLSVPVGEGLLGRVIDSLGQPIDG---FGPIDANEERPIFA 150

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  M+R+ +E    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  
Sbjct: 151 DSPDPMSRRMIEYPLATGVRVVDSMMTLAEGQRMGIFAPAGVGKSTLLGMFARGAQCDVT 210

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGREVREF+E  LG + + +SVVV ATSD S I R  A   A  IAEYF  +G
Sbjct: 211 VIALIGERGREVREFVELILGKEGMARSVVVCATSDRSSIERAKAAYVATAIAEYFRDRG 270

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G      G+ITA
Sbjct: 271 QRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGMG--ATGSITA 328

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VL + ++ +DPIA+ VR ILDGH++L+R +A   +YP +D L S+SR+  +    + 
Sbjct: 329 LYTVLAEDESGSDPIAEEVRGILDGHMILSREIAARNQYPAIDVLGSLSRVMSQVMPREY 388

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
               + +  L+ +  E   +  IG Y+PG + + D+A+ ++  I DFL Q   + +  D 
Sbjct: 389 VDAAARVRELLAKHREVEMLLQIGEYQPGGNPLADEAIAKIDAIRDFLGQRTDEWADPDD 448

Query: 430 FQ 431
            Q
Sbjct: 449 TQ 450


>gi|332533123|ref|ZP_08408992.1| flagellum-specific ATP synthase FliI [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037405|gb|EGI73859.1| flagellum-specific ATP synthase FliI [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 444

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 213/332 (64%), Gaps = 6/332 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GRV++ LG+P+DG   LGK   +  ++        ++R+ + K    G+R I+    
Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHHLKFAQNTINPLSRRPITKPMDVGVRAINSVIT 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           +  GQR+G+FAGSG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG +  K+
Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGVEGRKR 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVV A +D SP++R     +AVTIAEYF  +G NVLL+LDS+TR+A + REIA   GE 
Sbjct: 220 SVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI
Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGSITAFFTVLSEGDDMQDPIADAARAILDGHI 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LA+ G YP +D   S+SR+  +  S    +    L  +   +++ +D+  +G Y+
Sbjct: 340 VLSRDLADSGHYPAIDIEKSISRVMPQVVSEPHMQQARVLKQVYSMYQQNKDMITLGAYQ 399

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            G D +LD+A++ +P +  FL+Q   D+ S D
Sbjct: 400 KGTDQMLDQAINMMPRVNAFLQQGMRDVISYD 431


>gi|160880846|ref|YP_001559814.1| flagellar protein export ATPase FliI [Clostridium phytofermentans
           ISDg]
 gi|160429512|gb|ABX43075.1| flagellar protein export ATPase FliI [Clostridium phytofermentans
           ISDg]
          Length = 434

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 228/340 (67%), Gaps = 10/340 (2%)

Query: 101 WCGRVINALGKPIDGDD-SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
             G+ ++ LG P+D    SL +   S  + +K P  M+R+ + +    G+R +D    + 
Sbjct: 98  LLGQTLDGLGNPMDMSTLSLSE---SYPVDAKAPDPMDRELIGEVLSLGVRAVDGLLTIG 154

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQRIG+FAGSG+GKSTLL MFAR+   D  +I+L+GERGREV+EFIE  LG + +K+SV
Sbjct: 155 KGQRIGIFAGSGVGKSTLLGMFARNTKADINVIALIGERGREVKEFIERDLGPEGVKRSV 214

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V+ATSD+  ++RK A  TA  IAEYF  KG +VLL++DS+TRF+ + REI   SGE PV
Sbjct: 215 LVIATSDKPALIRKKAAKTATAIAEYFRDKGKDVLLMMDSLTRFSMAQREIGLASGEPPV 274

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           +RGYP SV+SE+P+LLER G S  +KG+IT + +VLVDGD+ N+PI D+ R ILDGHIVL
Sbjct: 275 SRGYPPSVYSEMPKLLERAGNS--DKGSITGLYTVLVDGDDFNEPITDTARGILDGHIVL 332

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R +A++  YP +D LAS+SR+     +++ KKL   L  ++  +++  D+  IG Y+PG
Sbjct: 333 SRKMAQKNHYPAIDVLASISRVMSAIATSEHKKLAGKLKMVLATYQDAEDLINIGAYKPG 392

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +  +D ++ ++  + +FL Q   D +    F++   KL+
Sbjct: 393 TNKNIDYSMRKIEQVNEFLCQQVDDKAD---FEDTIHKLE 429


>gi|23099013|ref|NP_692479.1| flagellum-specific ATP synthase [Oceanobacillus iheyensis HTE831]
 gi|22777241|dbj|BAC13514.1| flagellar-specific H(+)-transporting ATP synthase [Oceanobacillus
           iheyensis HTE831]
          Length = 439

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/388 (40%), Positives = 236/388 (60%), Gaps = 8/388 (2%)

Query: 55  NSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111
           N+D+  L +V+    + + + P     E+  G LV   G+   +       G+V+N+LGK
Sbjct: 49  NTDHALLAEVVGFRNEKIILMPYTEVTEVGPGCLVEATGKPLTVKVGRGLVGKVLNSLGK 108

Query: 112 PIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           P++  + L KG L+  +  + PP  + R  +    + G++ ID    +  GQR+G+FAGS
Sbjct: 109 PLNDTEELPKG-LANFMTEQTPPNPLERPPIRTPLQVGVKAIDSLLTMGEGQRVGLFAGS 167

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
           G+GKSTLL M AR+   +  +I+L+GERGREVREFIE+ LG + LKKS+VVVATSD+  +
Sbjct: 168 GVGKSTLLGMIARNSSAEINVIALIGERGREVREFIENDLGPEGLKKSIVVVATSDQPAL 227

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           +R     TA  I+EYF   G  V L++DS+TR A + REI    GE P  +GY  SVFS 
Sbjct: 228 MRIKGAYTATAISEYFRDLGYKVNLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFSI 287

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP+LLER G +    G IT   +VLVDGD+ N+PIAD+VR ILDGH +L+R LAE G++P
Sbjct: 288 LPKLLERTGTN--ANGTITGFYTVLVDGDDMNEPIADAVRGILDGHFILDRKLAERGQFP 345

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++ L S+SR+ +     + K+   +L  L+  +EE +++  IG Y+ G +  +D+A+  
Sbjct: 346 AINVLKSISRVMNVIADEEHKEQSQTLRKLLSTYEENQELITIGAYKKGTNHEIDQAISF 405

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            P I +FLKQ   +  + D   ++ K L
Sbjct: 406 QPYILEFLKQGIHEKRTFDETIQMMKNL 433


>gi|77359744|ref|YP_339319.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874655|emb|CAI85876.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 444

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/332 (43%), Positives = 214/332 (64%), Gaps = 6/332 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GRV++ LG+P+DG   LGK   +  ++   K    ++R+ + +    G+R I+    
Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHYLKFAQKPINPLSRRPISQPMDVGVRAINSVIT 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           +  GQR+G+FAGSG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG +  K+
Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGVEGRKR 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVV A +D SP++R     +AVTIAEYF  +G NVLL+LDS+TR+A + REIA   GE 
Sbjct: 220 SVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI
Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGSITAFFTVLSEGDDMQDPIADAARAILDGHI 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LA+ G YP +D   S+SR+  +  S    +    L  +   +++ +D+  +G Y+
Sbjct: 340 VLSRELADSGHYPAIDIEKSISRVMPQVVSETHMQQARVLKQVYSMYQQNKDMITLGAYQ 399

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            G D +LD+A++ +P +  FL+Q   D+ S D
Sbjct: 400 KGTDQMLDQAINMMPRVNAFLQQGMRDVISYD 431


>gi|206895959|ref|YP_002246686.1| flagellum-specific ATP synthase [Coprothermobacter proteolyticus
           DSM 5265]
 gi|206738576|gb|ACI17654.1| flagellum-specific ATP synthase [Coprothermobacter proteolyticus
           DSM 5265]
          Length = 438

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 171/414 (41%), Positives = 243/414 (58%), Gaps = 21/414 (5%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           L E Y K L V G  I ++T   +     S         V++        +V+       
Sbjct: 18  LFEVYGKVLNVSGLSIEALTPASFVGELCS---------VNRFDGKPMFAEVVGFKEGKT 68

Query: 71  YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME-- 127
            + P+G  + I    L+   GR   I  S    GRV+NA+G+P+D      KG +  E  
Sbjct: 69  LLMPIGDVQGIGPNSLIRAMGRPLWIKVSDGLVGRVVNAIGEPLDD-----KGPVYGEKR 123

Query: 128 -IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    P  + R+ + +  +T I+ ID    +  GQR+G+FAGSG+GKSTLL M AR+  
Sbjct: 124 SVYQDPPHPLKRKIITEPLQTSIKAIDGLLTVGKGQRVGIFAGSGVGKSTLLGMIARNSS 183

Query: 187 FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I LVGERGREVR+FIE D   +  K+SVVVVATSD+  +LR  A LT +TIAEYF
Sbjct: 184 ADVNVIILVGERGREVRKFIEEDLTEEGAKRSVVVVATSDQPALLRVKAVLTGMTIAEYF 243

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL+++DS+TR A + RE+  + GE P  RGY  SVF+ LP++LER G S+K  G
Sbjct: 244 RDQGKDVLVMMDSVTRLAMAQREVGLSIGEPPTTRGYTPSVFALLPKILERAGNSDK--G 301

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA I+VLV+GD+ N+P+AD+VRSILDGHIVL+R+LA    YP +D L S+SR+ +   
Sbjct: 302 SITAFITVLVEGDDMNEPVADAVRSILDGHIVLSRALAHRAHYPAIDVLQSISRVMNDVV 361

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           SA   KL + +  L+  + E  D+  IG Y+ G +  +D+A+  +  I  FL Q
Sbjct: 362 SAKHLKLANRMRELLAVYTEAEDLINIGAYQRGNNPKIDEALDYIDAINHFLLQ 415


>gi|330808218|ref|YP_004352680.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376326|gb|AEA67676.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 452

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/356 (42%), Positives = 215/356 (60%), Gaps = 3/356 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+ +DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADNGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  +      GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISVPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER G +EK  G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEKGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     SA
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPSVISA 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +  K          R++++RD+  +G Y PG D   D A+   P +  +L+QS +D
Sbjct: 376 EHMKRAQQFKQYWSRYQQSRDLISVGAYVPGGDRETDTAISLYPAMAVYLRQSLND 431


>gi|327543131|gb|EGF29567.1| flagellum-specific ATP synthase [Rhodopirellula baltica WH47]
          Length = 467

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/420 (39%), Positives = 248/420 (59%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++S+T    TV  ++  +  + + +    K +  L +VI  +     + P+     ++
Sbjct: 34  GRVASVTGDAVTVQGMTAPLGAICELMPPDAKPT--LARVIGFDDTRPILAPMEAISALA 91

Query: 83  LGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
            GD V    R    R+  S   CGRVI+A G+PIDG   L    + +      P +++R 
Sbjct: 92  AGDRVRLVSRSLTLRVGDS--LCGRVIDAFGRPIDGK-PLSDDLVRVSASRAAPDSLDRP 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++  +TG+R ID       GQR+G+FAGSG+GKSTLL M  R    D+++I++VGERG
Sbjct: 149 PIDEPLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLLGMLTRGTTADRIVIAMVGERG 208

Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV+EF++  LG   LK+SVVVVATSD+    R  A  TA  IAE F  +G  VLL++DS
Sbjct: 209 REVQEFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTATAIAEQFRDEGHRVLLLVDS 268

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+   +GE P  RGYP SVF+ LP+L+ER G     KG+ITA  +VLV+GD
Sbjct: 269 VTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAG--RTTKGSITAFYTVLVEGD 326

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           ++N+PI+D+VR +LDGHIVLNR LA  G YPP+D   S+SR+A+   + +  +    +  
Sbjct: 327 DNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISRVANHLVTPETYQATLGIRE 386

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            + +++ + D+  IG YR G D  +D A+     I D L+Q  ++++     Q   +KL 
Sbjct: 387 HMVQYQTSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQDANEITPIADSQARVQKLH 446


>gi|83716747|ref|YP_438376.1| flagellum-specific ATP synthase [Burkholderia thailandensis E264]
 gi|167614822|ref|ZP_02383457.1| flagellum-specific ATP synthase [Burkholderia thailandensis Bt4]
 gi|257141407|ref|ZP_05589669.1| flagellum-specific ATP synthase [Burkholderia thailandensis E264]
 gi|83650572|gb|ABC34636.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
          Length = 435

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 160/397 (40%), Positives = 228/397 (57%), Gaps = 9/397 (2%)

Query: 46  GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101
           G+  V +  + D +  QV+  N +  ++ P      +  G  V      G  RI  S  W
Sbjct: 41  GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCDRQGSLRIGRS--W 98

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+ IDG   LG GD+++         + ++ V      G+R ID    L  G
Sbjct: 99  LGRIVNGLGEAIDGRGPLG-GDVALRAHPAPVNPLRKRPVRDTLDVGVRAIDGLLTLGRG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+ AGSG+GKS LL M  R+   D V++ L+GERGREVREF++  LG+  L KSV+V
Sbjct: 158 QRVGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +DESP++R  A      IA +F   G NVLL++DS+TR+A + REIA + GE P  R
Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF  LP+L+E  G  E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R
Sbjct: 278 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   SVSR   +   A+ + L   +  +I R E+ RD+  +GGY  G D
Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHEALARKVKEMIGRHEQVRDLIPLGGYVQGAD 396

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              D+AV +   I  FL+Q   D++  D      ++L
Sbjct: 397 PATDEAVAKAARIDAFLRQDMRDVARRDATLAALREL 433


>gi|149189869|ref|ZP_01868149.1| putative flagellum-specific ATP synthase [Vibrio shilonii AK1]
 gi|148836355|gb|EDL53312.1| putative flagellum-specific ATP synthase [Vibrio shilonii AK1]
          Length = 448

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/367 (41%), Positives = 227/367 (61%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  + +I Y+ PV  +G   +   ++   G   ++  + W GRV+N LG+ +D    
Sbjct: 65  AQVVGFDHNIAYLMPVRQLGGLFAGAKVIPLDGDSSVNLGSHWLGRVVNGLGEALDDGAV 124

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 125 LKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 182

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L  +  KK++++ A +DESP++R  A L
Sbjct: 183 MGMITQNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATL 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  KG++VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER
Sbjct: 243 LCHRVAEYFRDKGNDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 302

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE   G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+RSLAE+G YP +D  AS
Sbjct: 303 AGNSEHPDGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRSLAEQGHYPAIDINAS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            L +    L   + + +++  +GGY+PG D  LD++V   P +  +
Sbjct: 363 ISRCMSGCTPEAHSTLANQFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVAMHPQLKKY 422

Query: 417 LKQSPSD 423
           L Q+ +D
Sbjct: 423 LLQAAND 429


>gi|167576647|ref|ZP_02369521.1| flagellum-specific ATP synthase [Burkholderia thailandensis TXDOH]
          Length = 435

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 160/397 (40%), Positives = 228/397 (57%), Gaps = 9/397 (2%)

Query: 46  GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101
           G+  V +  + D +  QV+  N +  ++ P      +  G  V      G  RI  S  W
Sbjct: 41  GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCDRQGSLRIGRS--W 98

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+ IDG   LG GD+++         + ++ V      G+R ID    L  G
Sbjct: 99  LGRIVNGLGEAIDGRGPLG-GDVALRAHPAPVNPLRKRPVRDTLDVGVRAIDGLLTLGRG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+ AGSG+GKS LL M  R+   D V++ L+GERGREVREF++  LG+  L KSV+V
Sbjct: 158 QRVGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +DESP++R  A      IA +F   G NVLL++DS+TR+A + REIA + GE P  R
Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF  LP+L+E  G  E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R
Sbjct: 278 GYPPSVFGMLPQLVEMAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   SVSR   +   A+ + L   +  +I R E+ RD+  +GGY  G D
Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHEALARKVKEMIGRHEQVRDLIPLGGYVQGAD 396

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              D+AV +   I  FL+Q   D++  D      ++L
Sbjct: 397 PATDEAVAKAARIDAFLRQDMRDVARRDATLAALREL 433


>gi|312135851|ref|YP_004003189.1| atpase, flii/yscn family [Caldicellulosiruptor owensensis OL]
 gi|311775902|gb|ADQ05389.1| ATPase, FliI/YscN family [Caldicellulosiruptor owensensis OL]
          Length = 434

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 158/403 (39%), Positives = 241/403 (59%), Gaps = 17/403 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGI-- 77
           G+++ +  +  T+      V +G     +   ++ L +V+    + V + P    VG+  
Sbjct: 22  GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGVFP 79

Query: 78  GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           G ++   D +F      I       GR+++ LG+PIDG   + K  +   + ++ P  + 
Sbjct: 80  GCKVIAQDSIFE-----IKVGNELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLE 133

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +++L+GE
Sbjct: 134 RPRIDTIMPLGIKAIDALLTIGRGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGE 193

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE++EF+E  L D  LK+SVVVVATSDES + R  A   A+ IAEYF  +G +VL ++
Sbjct: 194 RGRELKEFLEKDLKDEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLM 253

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G  +   G+ITA+ +VLVD
Sbjct: 254 DSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSIMPKLLERAG--KNRNGSITALFTVLVD 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ +       ++L +  
Sbjct: 312 GDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPFHRELANQT 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             ++  + E  D+  IG Y  G +  +D+A+  +P I  FL+Q
Sbjct: 372 KRILAVYREAEDLINIGAYTKGSNPEIDRAIDLMPRINQFLRQ 414


>gi|82702477|ref|YP_412043.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196]
 gi|82410542|gb|ABB74651.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196]
          Length = 470

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/440 (36%), Positives = 245/440 (55%), Gaps = 29/440 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           KN   LA+++  +  +     G ++ +T +    T L   V  G  ++    NS    +V
Sbjct: 15  KNCSGLAEVSPPFQIS-----GSLTRVTGLIMEATGLKLAVGSGCTILMPNGNSME-AEV 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA---------------------CW 101
           +  + D +Y+ P      ++ G  V  W R  + P+                        
Sbjct: 69  VGFHGDRLYLMPAHGMFGLAPGAKVVPWDRTGVLPNPGSASRQRRRASDQISRFPVGEAL 128

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+D    L     +    S + P ++R+ + +    G+R I+    +  G
Sbjct: 129 LGRVVDGTGRPLDNLGPLEVERSASAAGSPINP-LDREPISEVLDVGVRAINALLTVGRG 187

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE  LG + L +SVVV
Sbjct: 188 QRMGLFAGSGVGKSVLLGMMARYTSADIIVVGLIGERGREVKDFIEQILGAEGLARSVVV 247

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P++R      A ++AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +
Sbjct: 248 AAPADTWPLMRLQGASYATSVAEYFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATK 307

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP+L+ER G   K  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 308 GYPPSVFAKLPQLVERAGNGVKGSGSITAFYTVLAEGDDQQDPIADAARAILDGHIVLSR 367

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR      S +  + V +   L  R++ +RD+  +G Y PG D
Sbjct: 368 QLAESGHYPAIDIEASISRAMTSLISPEYFEQVRNFKQLFSRYQRSRDLISVGAYSPGND 427

Query: 401 LILDKAVHQVPIIYDFLKQS 420
            +LD+A+   P +  FL+Q+
Sbjct: 428 RLLDRAIALYPKLEHFLQQT 447


>gi|42524760|ref|NP_970140.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100]
 gi|39576970|emb|CAE78199.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100]
          Length = 442

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/343 (44%), Positives = 220/343 (64%), Gaps = 14/343 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
             GRV++ LG+P+D      KG++     + + S+V   ++R+ + +    GIR I+   
Sbjct: 103 LLGRVVDGLGRPLDD-----KGEVENFREVPLYSEVRNPLDRRPIREPIDLGIRAINGAL 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
               GQR+ + AGSG+GKS LL M AR+   D  +I+++GERGREVREFIE  LG + +K
Sbjct: 158 TAGLGQRVAIMAGSGVGKSVLLGMMARNTNADVNVIAMIGERGREVREFIEHDLGPEGMK 217

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVVV  TSD+SP+LR      A  +AEYFSS+G NVLL++DS+TRFA + REI  ++GE
Sbjct: 218 RSVVVCVTSDQSPLLRMRGAYVATALAEYFSSQGKNVLLMMDSVTRFAMAQREIGLSTGE 277

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GY  SVF+ LP+LLER G  E E G+IT   + LV+GD+ NDPI DSVRSI+DGH
Sbjct: 278 PPSQKGYTPSVFATLPKLLERAGSFEGE-GSITGFYTTLVEGDDMNDPIGDSVRSIVDGH 336

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+RSLA++G +P +D + S SR+     S +  KL   L   +  +++  D+  IG Y
Sbjct: 337 IVLSRSLAQKGHFPAIDIMQSASRVMRAVSSPEHSKLAQKLRETLAVYKDAEDLINIGAY 396

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +PG +  +D+AV  +  + DFLKQ   D ++   F +  +++Q
Sbjct: 397 KPGSNPKIDRAVKVIDQVNDFLKQRVEDPTN---FTQTVRQMQ 436


>gi|32477553|ref|NP_870547.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1]
 gi|32448107|emb|CAD77624.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/420 (39%), Positives = 248/420 (59%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++S+T    TV  ++  +  + + +    K +  L +VI  +     + P+     ++
Sbjct: 34  GRVASVTGDAVTVQGMTAPLGAICELMPPDAKPT--LARVIGFDDTRPILAPMEAISALA 91

Query: 83  LGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
            GD V    R    R+  S   CGRVI+A G+PIDG   L    + +      P +++R 
Sbjct: 92  AGDRVRLVSRSLTLRVGDS--LCGRVIDAFGRPIDGK-PLSDDLVRVSASRAAPDSLDRP 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++  +TG+R ID       GQR+G+FAGSG+GKSTLL M  R    D+++I++VGERG
Sbjct: 149 PIDEPLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLLGMLTRGTTADRIVIAMVGERG 208

Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV+EF++  LG   LK+SVVVVATSD+    R  A  TA  IAE F  +G  VLL++DS
Sbjct: 209 REVQEFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTATAIAEKFRDEGHRVLLLVDS 268

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+   +GE P  RGYP SVF+ LP+L+ER G     KG+ITA  +VLV+GD
Sbjct: 269 VTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAG--RTTKGSITAFYTVLVEGD 326

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           ++N+PI+D+VR +LDGHIVLNR LA  G YPP+D   S+SR+A+   + +  +    +  
Sbjct: 327 DNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISRVANHLVTPETYQATLGIRE 386

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            + +++ + D+  IG YR G D  +D A+     I D L+Q  ++++     Q   +KL 
Sbjct: 387 HMVQYQTSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQDANEITPIADSQARVQKLH 446


>gi|108810006|ref|YP_653922.1| type III secretion system ATPase [Yersinia pestis Antiqua]
 gi|108813561|ref|YP_649328.1| type III secretion system ATPase [Yersinia pestis Nepal516]
 gi|145600951|ref|YP_001165027.1| type III secretion system ATPase [Yersinia pestis Pestoides F]
 gi|108777209|gb|ABG19728.1| type III secretion system ATP synthase [Yersinia pestis Nepal516]
 gi|108781919|gb|ABG15977.1| putative type III secretion system ATP synthase [Yersinia pestis
           Antiqua]
 gi|145212647|gb|ABP42054.1| type III secretion system ATP synthase [Yersinia pestis Pestoides
           F]
          Length = 448

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 158/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           L +V+ I  ++  + P    + +  G  V   G   R+   A   GR+++ LG PIDG  
Sbjct: 65  LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G    E+    P  + RQ VE+   TGIR ID       GQRIG+FA +G+GKSTL
Sbjct: 125 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTL 182

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           LSM       D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R     
Sbjct: 183 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE P A  +P SVF+ LPRLLER
Sbjct: 243 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 302

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S++  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  AS
Sbjct: 303 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 360

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  +  SA +  +   L  ++  ++E   +  IG Y+ G DL  D+A+ + P I  F
Sbjct: 361 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 420

Query: 417 LKQ 419
           L+Q
Sbjct: 421 LQQ 423


>gi|332159957|ref|YP_004296534.1| Secretion system apparatus ATP synthase ssaN [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325664187|gb|ADZ40831.1| Secretion system apparatus ATP synthase ssaN [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 451

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 7/374 (1%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           + D L +V+ I      + P      +  G  +   G   R+       GRV++ LG+PI
Sbjct: 58  SPDMLAEVVAIEQQTALLSPFASSAGLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPI 117

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    L +G    E+    P  + RQ V++   TGIR ID       GQRIG+FA +G+G
Sbjct: 118 DAGPPL-RGHWR-ELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVG 175

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           KS+LLSM  R    D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R 
Sbjct: 176 KSSLLSMLCRGCRADIIVLALIGERGREVREFLEQVLTPETRARTVVVVATSDRPALERL 235

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
               TA T+AEYF  +G+ VLL+ DS+TR+A + REI   +GE P    +PTSVF+ LPR
Sbjct: 236 KGIYTATTVAEYFRERGEKVLLMADSLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPR 295

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G SE+  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D
Sbjct: 296 LLERAGNSER--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAID 353

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             ASVSR+  +  SA+ + L   L H+   ++E   +  +G Y+ G DL  D+A+ + P 
Sbjct: 354 IAASVSRIMPQIVSAEHRALAQKLRHIQACYQEIELLVRVGEYQEGQDLQADEALQRYPG 413

Query: 413 IYDFLKQSPSDLSS 426
           I  FL+Q  S LSS
Sbjct: 414 ICAFLQQE-SALSS 426


>gi|253573521|ref|ZP_04850864.1| flagellar protein export ATPase FliI [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847049|gb|EES75054.1| flagellar protein export ATPase FliI [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 439

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/355 (43%), Positives = 226/355 (63%), Gaps = 11/355 (3%)

Query: 70  VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGD---DSLGKGDLS 125
           V + P+G  + I  G D+V       +   +   G+V++ LG+P+DG      +G     
Sbjct: 69  VLLMPLGELQSIGPGCDVVGTGKPLTVQVGSELLGKVLDGLGQPLDGSLLPSRMGHYSTY 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
            + M+     +NR RV +    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+ 
Sbjct: 129 NKPMNP----LNRPRVSEPIGIGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMIARNT 184

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+LVGERGREV +FIE  LG + L++SVVVVATSD+  ++R    L A TIAEY
Sbjct: 185 SADVNVIALVGERGREVLDFIERDLGPEGLERSVVVVATSDQPALIRMKGALIATTIAEY 244

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G NV+L++DS+TR+A ++RE+    GE P  RGY  SVF+ LP+L+ER G      
Sbjct: 245 FRDRGLNVMLMMDSVTRYAMALREVGLAVGEPPAMRGYTPSVFAALPKLMERAGTGPT-- 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A +G +P +D LAS+SR+    
Sbjct: 303 GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANKGHFPAIDILASISRVMKDI 362

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            S ++ +   +L  L+  ++++ D+  IG Y+PG +  +D+A+  +  I++F KQ
Sbjct: 363 VSDEQNEAAENLKRLMAVYKDSEDLINIGAYQPGSNPDIDEAIGAIQQIWNFTKQ 417


>gi|34558482|ref|NP_908297.1| flagellum-specific ATP synthase [Wolinella succinogenes DSM 1740]
 gi|34484201|emb|CAE11197.1| FLAGELLUM-SPECIFIC ATP SYNTHASE [Wolinella succinogenes]
          Length = 434

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 165/410 (40%), Positives = 242/410 (59%), Gaps = 13/410 (3%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNS-DNLGQVIRINLDIVYICP 74
           K+L    G +  ++S    V  L   V  GD V + QG+N  +++G V  +  +   + P
Sbjct: 13  KSLSPTFGTVVKVSSGAIVVVGLRPSV--GDIVRIIQGENHHESMGMVTVVESESFTVSP 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               E   +GD V+   R  +I   A   GRV++ LG+PIDG   +    L  E    + 
Sbjct: 71  FSFIEGSKVGDRVYLNNRGLQIPVGAGLLGRVVDPLGRPIDGAGEI----LGTEYAPIIK 126

Query: 134 P---AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           P   AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  +       
Sbjct: 127 PPIAAMKRGMIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKGASAPIK 186

Query: 191 IISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           +I+L+GERGREV EFIE  LG NL+ +V+VVATSD+SP++RK    +A+++AEYF ++G+
Sbjct: 187 VIALIGERGREVPEFIEKNLGGNLENTVLVVATSDDSPLMRKYGAFSAMSVAEYFKARGE 246

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E+  G+ITA 
Sbjct: 247 DVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-KEEGHGSITAF 305

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  DPIAD  RSILDGHIVL+R L + G YPP++ L S SRL +   + D  
Sbjct: 306 FTVLVEGDDMGDPIADQSRSILDGHIVLSRELTDFGIYPPINILNSASRLMNDVSTKDHV 365

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                   L    +E   +  IG Y+ G D  LD+A+ +   +  +LKQ+
Sbjct: 366 LAARKFRRLYSLLKENEVLIRIGAYQKGNDRELDEAIEKKERMEGYLKQN 415


>gi|269965406|ref|ZP_06179526.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
 gi|269830052|gb|EEZ84281.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
          Length = 448

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 228/366 (62%), Gaps = 3/366 (0%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+     I Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P+D D +
Sbjct: 66  AQVVGFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVLNGLGEPLD-DGA 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             KG   + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+
Sbjct: 125 PLKGGERVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLM 184

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M  ++   D +++ L+GERGREVREFIE  L  +  KK++++ A +DESP++R  A L 
Sbjct: 185 GMITKNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATLL 244

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              ++EYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER 
Sbjct: 245 CHRVSEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERA 304

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G SE + G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+
Sbjct: 305 GNSENQYGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASI 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR  +         + ++   +   + + +++  +GGY+PG D  LD++V   P +  +L
Sbjct: 365 SRCMNTCTQDAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAYL 424

Query: 418 KQSPSD 423
           +Q+ ++
Sbjct: 425 QQAANE 430


>gi|318607492|emb|CBY28990.1| type III secretion cytoplasmic ATP synthase [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 451

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 7/374 (1%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           + D L +V+ I      + P      +  G  +   G   R+       GRV++ LG+PI
Sbjct: 58  SPDMLAEVVAIEQQTALLSPFASSAGLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPI 117

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    L +G    E+    P  + RQ V++   TGIR ID       GQRIG+FA +G+G
Sbjct: 118 DAGPPL-RGHWR-ELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVG 175

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           KS+LLSM  R    D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R 
Sbjct: 176 KSSLLSMLCRGCRADIIVLALIGERGREVREFLEQVLTPETRARTVVVVATSDRPALERL 235

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
               TA T+AEYF  +G+ VLL+ DS+TR+A + REI   +GE P    +PTSVF+ LPR
Sbjct: 236 KGIYTATTVAEYFRERGEKVLLMADSLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPR 295

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G SE+  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D
Sbjct: 296 LLERAGNSER--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAID 353

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             ASVSR+  +  SA+ + L   L H+   ++E   +  +G Y+ G DL  D+A+ + P 
Sbjct: 354 IAASVSRIMPQIVSAEHRALAQKLRHIQACYQEIELLVRVGEYQEGQDLQADEALQRYPG 413

Query: 413 IYDFLKQSPSDLSS 426
           I  FL+Q  S LSS
Sbjct: 414 ICAFLQQE-SALSS 426


>gi|163733137|ref|ZP_02140581.1| flagellum-specific ATP synthase [Roseobacter litoralis Och 149]
 gi|161393672|gb|EDQ17997.1| flagellum-specific ATP synthase [Roseobacter litoralis Och 149]
          Length = 449

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/386 (39%), Positives = 229/386 (59%), Gaps = 2/386 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  + +    +  L+    +GD VV   +     G++++++ D + I P    E ++L
Sbjct: 24  GRVCRVEAGVIHIAGLAGKARIGDLVVVYRQGDPLSGEILQLDGDTLVILPDQDAEGVAL 83

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
            D         I+PS  W GR+I+  G PIDG   L +G  +  + S  P    R+ +  
Sbjct: 84  NDRAALLEARGIAPSEGWIGRIIDPFGNPIDGKPLL-RGAHARSLRSAPPEPALRRSMGA 142

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
              TG+ V++   P+  GQR+G+FAGSG+GKS+LL   A++   D V+++LVGERGRE+R
Sbjct: 143 RLNTGMSVLNTMLPVVKGQRVGLFAGSGVGKSSLLGHLAQNMTADVVVVALVGERGRELR 202

Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            F+E+ LG + LK+SVVV ATSD+SP++R+     A+++AE+F   G +VL++ DSITRF
Sbjct: 203 HFVEEVLGSEGLKRSVVVCATSDQSPLIRRRCAWAAMSVAEHFRDMGLSVLILADSITRF 262

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + RE+A  SGE PV RGYP S    +  L ER GP E  +G+IT + SVLV G +  +
Sbjct: 263 AEAHREVAVASGEAPVLRGYPPSTAHLIMSLCERAGPGEGSQGDITGIFSVLVAGSDMEE 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PIAD +R +LDGHIVLNR +AE GRYP +D L S+SR    A    E +L+S +   +  
Sbjct: 323 PIADILRGVLDGHIVLNREIAERGRYPAIDVLKSISRSLPAAADDIENELISIVRRYLSV 382

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVH 408
           +E+   +   G Y  G D  +D A+ 
Sbjct: 383 YEQNEMMIRAGLYSQGSDPEIDAAIQ 408


>gi|22124440|ref|NP_667863.1| type III secretion system ATPase [Yersinia pestis KIM 10]
 gi|51594678|ref|YP_068869.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP
           32953]
 gi|150260685|ref|ZP_01917413.1| putative type III secretion system ATP synthase [Yersinia pestis
           CA88-4125]
 gi|162421510|ref|YP_001608232.1| type III secretion system ATPase [Yersinia pestis Angola]
 gi|165926753|ref|ZP_02222585.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165936441|ref|ZP_02225009.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010584|ref|ZP_02231482.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213954|ref|ZP_02239989.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167402195|ref|ZP_02307668.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167418696|ref|ZP_02310449.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426202|ref|ZP_02317955.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167470729|ref|ZP_02335433.1| type III secretion system ATPase [Yersinia pestis FV-1]
 gi|186893681|ref|YP_001870793.1| type III secretion system ATPase [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927473|ref|YP_002345348.1| type III secretion system ATPase [Yersinia pestis CO92]
 gi|229836521|ref|ZP_04456687.1| putative type III secretion system ATP synthase [Yersinia pestis
           Pestoides A]
 gi|229840129|ref|ZP_04460288.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842210|ref|ZP_04462365.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904051|ref|ZP_04519164.1| putative type III secretion system ATP synthase [Yersinia pestis
           Nepal516]
 gi|270488963|ref|ZP_06206037.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis KIM D27]
 gi|294502339|ref|YP_003566401.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|21957227|gb|AAM84114.1|AE013654_3 flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|51587960|emb|CAH19563.1| putative type III secretion system ATPase, EscN/SsaN/YscN [Yersinia
           pseudotuberculosis IP 32953]
 gi|115346084|emb|CAL18952.1| putative type III secretion system ATP synthase [Yersinia pestis
           CO92]
 gi|149290093|gb|EDM40170.1| putative type III secretion system ATP synthase [Yersinia pestis
           CA88-4125]
 gi|162354325|gb|ABX88273.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis Angola]
 gi|165915557|gb|EDR34166.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921376|gb|EDR38600.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165990674|gb|EDR42975.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204929|gb|EDR49409.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962690|gb|EDR58711.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048376|gb|EDR59784.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054913|gb|EDR64715.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|186696707|gb|ACC87336.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pseudotuberculosis PB1/+]
 gi|229679821|gb|EEO75924.1| putative type III secretion system ATP synthase [Yersinia pestis
           Nepal516]
 gi|229690520|gb|EEO82574.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696495|gb|EEO86542.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229706205|gb|EEO92213.1| putative type III secretion system ATP synthase [Yersinia pestis
           Pestoides A]
 gi|262360419|gb|ACY57140.1| flagellum-specific ATP synthase [Yersinia pestis D106004]
 gi|262364369|gb|ACY60926.1| flagellum-specific ATP synthase [Yersinia pestis D182038]
 gi|270337467|gb|EFA48244.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis KIM D27]
 gi|294352798|gb|ADE63139.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|320013869|gb|ADV97440.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 445

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 158/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           L +V+ I  ++  + P    + +  G  V   G   R+   A   GR+++ LG PIDG  
Sbjct: 62  LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G    E+    P  + RQ VE+   TGIR ID       GQRIG+FA +G+GKSTL
Sbjct: 122 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           LSM       D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R     
Sbjct: 180 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE P A  +P SVF+ LPRLLER
Sbjct: 240 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S++  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  AS
Sbjct: 300 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 357

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  +  SA +  +   L  ++  ++E   +  IG Y+ G DL  D+A+ + P I  F
Sbjct: 358 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 417

Query: 417 LKQ 419
           L+Q
Sbjct: 418 LQQ 420


>gi|299066538|emb|CBJ37728.1| Flagellum-specific ATP synthase [Ralstonia solanacearum CMR15]
          Length = 472

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 163/393 (41%), Positives = 237/393 (60%), Gaps = 14/393 (3%)

Query: 53  GKNSDN-LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINA 108
           G N+D+ L +V+ I+   + + P G  + ++ G+ V   G    FR+  +    GRVI+A
Sbjct: 75  GANADHVLAEVVGIDGGQIILMPFGSVQGLAAGNEVIALGGRAEFRVGEA--LLGRVIDA 132

Query: 109 LGKPIDGDDSLGKGDLSMEIMS-KVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            G P+DG   L    L  E    K  P   M R R++   +TG+R ID    L  GQRIG
Sbjct: 133 FGAPLDG---LAAPVLLPEARKLKAAPINPMRRPRIDTILETGVRSIDALLTLGRGQRIG 189

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATS 224
           +FAGSG+GKSTLL M AR    +  +I+L+GERGREV+EFI+  LG D LK+SVV+VAT+
Sbjct: 190 IFAGSGVGKSTLLGMIARHMDAEVNVIALIGERGREVKEFIDKQLGADGLKRSVVIVATA 249

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           D+  + R  A   A+TIAEYF   G  V+L +DSITRFA + REI   +GE P ARGY  
Sbjct: 250 DQPALSRVRAVYAALTIAEYFRDLGKQVVLTMDSITRFAMARREIGLAAGEPPTARGYTP 309

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           SVF+ELP L ER G +    G ITA+++VLV+GD+ N+PI+D++R+ILDGH+VL+R +A 
Sbjct: 310 SVFAELPELCERCG-TAPSGGAITALLTVLVEGDDLNEPISDALRAILDGHVVLSRQIAH 368

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G+YP +D L S SRL     + +E+ +      ++   E  R +  +G Y  G +  LD
Sbjct: 369 QGQYPAIDVLKSASRLLPDLSTPEERAVGGRAIQILAMLERNRQMVELGAYERGTNPELD 428

Query: 405 KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +A+   P +  +L Q+      ++  Q++   +
Sbjct: 429 RALACAPHLKTWLSQAEGGARRDEAMQQLAAAV 461


>gi|45440276|ref|NP_991815.1| type III secretion system ATPase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|45435132|gb|AAS60692.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 446

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 158/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           L +V+ I  ++  + P    + +  G  V   G   R+   A   GR+++ LG PIDG  
Sbjct: 63  LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G    E+    P  + RQ VE+   TGIR ID       GQRIG+FA +G+GKSTL
Sbjct: 123 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTL 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           LSM       D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R     
Sbjct: 181 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE P A  +P SVF+ LPRLLER
Sbjct: 241 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 300

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S++  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  AS
Sbjct: 301 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 358

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  +  SA +  +   L  ++  ++E   +  IG Y+ G DL  D+A+ + P I  F
Sbjct: 359 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 418

Query: 417 LKQ 419
           L+Q
Sbjct: 419 LQQ 421


>gi|224373742|ref|YP_002608114.1| flagellum-specific ATP synthase [Nautilia profundicola AmH]
 gi|223589927|gb|ACM93663.1| flagellum-specific ATP synthase [Nautilia profundicola AmH]
          Length = 432

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/407 (39%), Positives = 235/407 (57%), Gaps = 14/407 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  I       T L+    +GD V     N + LG V  ++ +   + P    E   +
Sbjct: 20  GIVKKINPTNLIATGLNP--SIGDIVKICSGNHEILGMVTALDENSFVVTPFSFLEGFKI 77

Query: 84  GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNR 138
           GD ++      +I       GRV++    PID      KGD+  E    IM+K    M R
Sbjct: 78  GDKIYIDENGMQIPVGEGLLGRVVDPFMNPIDD-----KGDIFFETKYPIMTKPISPMKR 132

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
             + + F+T ++ ID       GQ++G+FAGSG+GKSTL+SM  +    D  +I+L+GER
Sbjct: 133 GVINEVFETKVKAIDGLLTCGKGQKLGIFAGSGVGKSTLMSMIVKGASADIKVIALIGER 192

Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           GRE+ EFIE  LG +L  +V++VATSD+S ++RK    +A+ +AEYF  K  +VL ++DS
Sbjct: 193 GREIPEFIEHQLGGDLTNTVIIVATSDDSALMRKYGAFSAMAVAEYFKDKNKDVLFLMDS 252

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA + REI    GE P ++GYP S    LP+L+ER G  EK+KG+ITA  +VLV+GD
Sbjct: 253 ITRFAMAQREIGLAMGEPPTSKGYPPSAIMLLPQLMERAG-KEKDKGSITAFFTVLVEGD 311

Query: 319 NHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           + + DPIAD  RSILDGH +L+R L + G YPP++ L S SR+ +   + +  +      
Sbjct: 312 DTSADPIADQARSILDGHFILSRELTDSGIYPPINILNSASRVMNNVVTKEHLQKAQKFK 371

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            L    +E   +  IG Y+ GVD  LD+A+++   + +FLKQSP++L
Sbjct: 372 KLYSLLKENEVLIRIGAYQKGVDPELDEAINKKEAMENFLKQSPNEL 418


>gi|268316354|ref|YP_003290073.1| ATPase, FliI/YscN family [Rhodothermus marinus DSM 4252]
 gi|262333888|gb|ACY47685.1| ATPase, FliI/YscN family [Rhodothermus marinus DSM 4252]
          Length = 450

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 151/333 (45%), Positives = 206/333 (61%), Gaps = 4/333 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++A  +PIDG   L   D    + +  PP ++R+ ++    TGIR ID F  L 
Sbjct: 108 AMLGRVVDANARPIDGKGPLTVTD-EQPVRNDPPPPLSRRMIDTPLFTGIRAIDTFLTLG 166

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQRIG+FAGSG+GKSTLL M AR    D  +I+L+GERGREV+EFI D LG + LK+SV
Sbjct: 167 RGQRIGIFAGSGVGKSTLLGMIARRARADVNVIALIGERGREVQEFIADNLGPEGLKRSV 226

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV  T D++ + R      A+ IAEYF  +G +VLL++DSITR A + REI    GE P 
Sbjct: 227 VVAVTGDQAAMSRVKGASVAMAIAEYFRDRGLDVLLMMDSITRVAMAQREIGLAVGEPPT 286

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGY  SVF+ LPRLLER GP  +  G IT + +VLVD D+ NDPI D+VR ILDGHIVL
Sbjct: 287 TRGYTPSVFAMLPRLLERAGPGAR--GTITGIFTVLVDADDMNDPIGDAVRGILDGHIVL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA    +P +D L SVSR+  +  +A+ + LV     L+  ++E  D+  +G Y  G
Sbjct: 345 SRRLAHANHFPAIDVLQSVSRVMPRVTTAEHRALVEEARRLLATYQEAEDLIRVGAYEMG 404

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               +D+A+     +  FL+Q   +++ + V Q
Sbjct: 405 TRPEIDRAILAHEALMAFLRQGVDEVADDPVAQ 437


>gi|331269317|ref|YP_004395809.1| flagellar protein export ATPase FliI [Clostridium botulinum
           BKT015925]
 gi|329125867|gb|AEB75812.1| flagellar protein export ATPase FliI [Clostridium botulinum
           BKT015925]
          Length = 440

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/374 (42%), Positives = 226/374 (60%), Gaps = 8/374 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVI 106
           ++  +N   + +V+    D V + P  +GE I +G    ++       +  S    G+V+
Sbjct: 50  IYNKENDPIMCEVVGFKEDNVILMP--LGELIGIGPGCRVIPSKKYLTVKCSEKLLGKVL 107

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LGK +  DD      +   + +  P  + R+R++    TG+R ID F     GQR+G+
Sbjct: 108 NGLGKSLKYDDDEVHIGMEYPLDTAPPDPLKRRRIKDSIATGVRAIDGFLTCGEGQRVGI 167

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           FAGSG+GKST L M AR    D  +I+L+GERGREV +FIE  LG+  LKKSV+V ATSD
Sbjct: 168 FAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSD 227

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +  ++R     TA  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +GY  S
Sbjct: 228 QPALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPS 287

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF+ LPRL+ER G S  EKG+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +
Sbjct: 288 VFAMLPRLMERSGMS--EKGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGK 345

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
             YP +D L SVSRL ++    + KK  S    L+  ++ + D+  IG Y  G +  +D 
Sbjct: 346 NHYPAIDVLNSVSRLMNEIADNEHKKAASFARDLLATYKNSEDLINIGAYAQGSNNKVDM 405

Query: 406 AVHQVPIIYDFLKQ 419
           A+    +I D+L+Q
Sbjct: 406 AIEYNDMINDYLRQ 419


>gi|254499110|ref|ZP_05111800.1| flagellar protein export ATPase FliI [Legionella drancourtii
           LLAP12]
 gi|254351649|gb|EET10494.1| flagellar protein export ATPase FliI [Legionella drancourtii
           LLAP12]
          Length = 430

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/382 (40%), Positives = 235/382 (61%), Gaps = 5/382 (1%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           ++ Q + +    +VI      VY+ P     ++ +G  V   G    I+      G V++
Sbjct: 41  ILDQNQQTVMQAEVIGFEQGKVYLMPYD-SVQVCMGYKVRATGNHLSIAVGEALLGHVVD 99

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
           A  +PID    L      +    K+ P + R  + +   TGI+ ID   PL  GQRIG+F
Sbjct: 100 AFAQPIDEQIKLTYTQRVLTKNKKINP-LTRMPINERLTTGIQAIDSLLPLGKGQRIGIF 158

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDE 226
           AGSG+GKSTLL    ++   +  +I+L+GERGREV +FI ++L +  LKKSV+VV+ SDE
Sbjct: 159 AGSGVGKSTLLGTMVQNLQSEINVIALIGERGREVNDFIVNHLDEATLKKSVLVVSCSDE 218

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S ++R+ A  TA  IAEYF  +   V+L +DSITRFA + REI+ + GE P ARGY  SV
Sbjct: 219 SALMRRQAVYTATAIAEYFCQQSKQVMLFMDSITRFAMAQREISLSLGEPPTARGYTPSV 278

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LP ++ER G + KE+G+I+A+ +VLV+GD+ N+P+AD +R++LDGHIVL R LA+ G
Sbjct: 279 FALLPGIIERTG-NFKEQGSISALYTVLVEGDDFNEPLADHMRALLDGHIVLTRELAQRG 337

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +  L SVSRLA    + +E++L++ +   +  +++ +D+  +G Y+PG + +LD+A
Sbjct: 338 HYPAISILQSVSRLAKHIVAPEEQQLINQIIATLSLYQQNKDLIEVGAYKPGNNALLDEA 397

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           V ++P I   L Q  +   S D
Sbjct: 398 VERLPAINQLLIQDKNHFLSFD 419


>gi|254463886|ref|ZP_05077297.1| flagellum-specific ATP synthase [Rhodobacterales bacterium Y4I]
 gi|206684794|gb|EDZ45276.1| flagellum-specific ATP synthase [Rhodobacterales bacterium Y4I]
          Length = 442

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/421 (37%), Positives = 250/421 (59%), Gaps = 5/421 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M+  L+ L +  +  S  L  Q G ++ I      ++ L+    +GD  V+ +G   +  
Sbjct: 1   MKAELQALTR--QIASTRLATQMGRVTGIAGGEIEISGLASAARIGDRLVLRRGPGDELH 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V++I  + + + P    +  ++GD V        +PS  W GRVI+  G+P+DG   L
Sbjct: 59  GEVLKIKGNNISMLPDRAPDGAAIGDAVLLHPSPEFAPSDHWIGRVIDPFGEPLDGRPML 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G +  ++M+  P A  R+ + +   TG  +++   P+  GQR+G+FAGSG+GKS+LL+
Sbjct: 119 -PGSVPRDLMAAPPKAAGRRGMGERLPTGQALLNTILPIVRGQRVGLFAGSGVGKSSLLA 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+E  LG + ++++VVV ATSD+S ++R+     A
Sbjct: 178 KLAKAMEADVVVMALIGERGREVNHFVEQVLGPEGMRRAVVVAATSDQSALVRRRCAWAA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +T+AE+F  +G NVL + DS+TRFA + REI+  SGE P  RGYP SV   +  L ER G
Sbjct: 238 MTVAEHFRDQGKNVLFLADSVTRFAEAHREISAASGEAPALRGYPPSVTPLITGLCERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + +G+ITAV SVLV G + ++PIAD +R +LDGHIVL+R +AE GR+P +D   SVS
Sbjct: 298 PGGEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLSREIAERGRFPAIDVSRSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A +ADE   +  +   +  +E++  +   G Y  G D +LD+AV   P +  F  
Sbjct: 358 RSLPAAATADENAAIQEVRKFLGAYEQSEVMIRAGLYAEGNDAVLDQAVKLWPELDAFFG 417

Query: 419 Q 419
           +
Sbjct: 418 R 418


>gi|229826305|ref|ZP_04452374.1| hypothetical protein GCWU000182_01677 [Abiotrophia defectiva ATCC
           49176]
 gi|229789175|gb|EEP25289.1| hypothetical protein GCWU000182_01677 [Abiotrophia defectiva ATCC
           49176]
          Length = 423

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/391 (40%), Positives = 239/391 (61%), Gaps = 8/391 (2%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLG---QVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
           T+  L     + D  +    N  + G   +V+    + + + P G  E + +G LV   G
Sbjct: 15  TIESLGPSANINDLCIIYANNKYSKGTYAEVVGFRDNRILLMPYGDLEGVGVGSLVESTG 74

Query: 92  R-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
             F +       G V++ LG+PID   +  K D S  + +  P  ++RQ +E+    G++
Sbjct: 75  APFHVDVGYDMLGVVVDGLGRPIDTSVTFEKED-SYSVEAMPPDPLSRQMIEEVLPLGVK 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            +D    +  GQR+G+FAGSG+GKSTL+ MFAR+   D  +I+L+GERGREVREFIE  L
Sbjct: 134 AVDALLTVGKGQRVGIFAGSGVGKSTLMGMFARNTKADVNVIALIGERGREVREFIERDL 193

Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  +++SVVVVATSD+  ++RK A  TA  IAE+F  KG++VLL++DS+TRF+ + REI
Sbjct: 194 GEEGMRRSVVVVATSDQPALIRKKAAKTATAIAEFFRDKGEDVLLMMDSLTRFSMAQREI 253

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              SGE PV RGYP SV+SE+P+LLER G    + G+IT + +VLVDGD+ N+PIAD+ R
Sbjct: 254 GLASGEPPVTRGYPPSVYSEMPKLLERAG--NGKDGSITGLYTVLVDGDDMNEPIADTAR 311

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            ILDGH VL+R+LA++  YP +D L S+SR        + K+    + +++  +    D+
Sbjct: 312 GILDGHFVLSRTLAQKNHYPAIDVLQSISRCMSAVADKEHKRFAGMMKNVMATYNGAEDL 371

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             IG Y+ G +  +D A+ ++  +  FL QS
Sbjct: 372 INIGAYKSGSNPDIDFAISKIKEVNAFLMQS 402


>gi|163800137|ref|ZP_02194038.1| putative flagellum-specific ATP synthase [Vibrio sp. AND4]
 gi|159175580|gb|EDP60374.1| putative flagellum-specific ATP synthase [Vibrio sp. AND4]
          Length = 450

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 140/328 (42%), Positives = 212/328 (64%), Gaps = 4/328 (1%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S+ W GRV+N LG+P D    L  GD +S+E     P  + R+ V+     G+R I+   
Sbjct: 105 SSQWLGRVVNGLGEPFDDGAPLKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLL 162

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLK 215
            +  GQRIG+ AGSG+GKS L+ M  ++   D +++ L+GERGREVREF+E ++  +  +
Sbjct: 163 TVGKGQRIGLMAGSGVGKSVLMGMITQNTEADVIVVGLIGERGREVREFVERNFTPEARR 222

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K++++ A +DESP++R  A L    +AEYF  +G +VLL++DS+TR+A + REIA + GE
Sbjct: 223 KAIIIAAPADESPLMRLRATLLCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGE 282

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P +RGYP SVFS LP+LLER G SE   G++TA+ +VL +GD+  DP+ DS R+ILDGH
Sbjct: 283 PPASRGYPPSVFSVLPQLLERAGNSENPDGSLTAIYTVLAEGDDQQDPVVDSARAILDGH 342

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R LAE+G YP +D  AS+SR            + ++   L   + + +++  +GGY
Sbjct: 343 VVLSRQLAEQGHYPAIDINASISRCMSACTHEAHSTIANNFRQLYSNYLQVKELLPLGGY 402

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +PG D  LD++V   P +  +L+QS S+
Sbjct: 403 QPGQDPELDQSVSMYPHLRAYLQQSASE 430


>gi|153948731|ref|YP_001402772.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP
           31758]
 gi|152960226|gb|ABS47687.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pseudotuberculosis IP 31758]
          Length = 445

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 157/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           L +V+ I  ++  + P    + +  G  V   G   R+   A   GR+++ LG PIDG  
Sbjct: 62  LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G    E+    P  + RQ VE+   TG+R ID       GQRIG+FA +G+GKSTL
Sbjct: 122 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGVRAIDGILSCGEGQRIGIFAAAGVGKSTL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           LSM       D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R     
Sbjct: 180 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE P A  +P SVF+ LPRLLER
Sbjct: 240 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S++  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  AS
Sbjct: 300 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 357

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  +  SA +  +   L  ++  ++E   +  IG Y+ G DL  D+A+ + P I  F
Sbjct: 358 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 417

Query: 417 LKQ 419
           L+Q
Sbjct: 418 LQQ 420


>gi|86158021|ref|YP_464806.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774532|gb|ABC81369.1| type III secretion system ATPase, FliI/YscN [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 435

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 160/384 (41%), Positives = 222/384 (57%), Gaps = 12/384 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDG 115
           L +V+ +  D   + P G    + L   V   GR    R+ P     GRV++ LG+P+DG
Sbjct: 56  LAEVVGLRDDRAVLVPFGELGGVGLDAEVIPTGRPHAIRVGPG--LLGRVLDGLGRPLDG 113

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L  G     +    P  + R+ V      G+RV+D       GQRIG+FAGSG+GKS
Sbjct: 114 A-PLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGLLTAGEGQRIGLFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL   AR    D  ++ LVGERGREVREF+E  LG D L +SVVV ATSD   ++R  A
Sbjct: 173 TLLGQLARGARADLCVVCLVGERGREVREFLEGPLGADGLARSVVVAATSDAPALVRLKA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A  +AE+F+ +GD VLL++DS+TR+A ++RE+   +GE P  +GYP SVF+ LPRLL
Sbjct: 233 AHVATAVAEWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLL 292

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G   + +G ITAV +VLV G +  +PIAD VR ILDGH+VL+R++A  GR+P VDPL
Sbjct: 293 ERAG--NRARGGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVAAGGRFPAVDPL 350

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S+SR+       D       +  L+      RD+  +G YR G D   D A+ ++P + 
Sbjct: 351 QSLSRVMPAVAGPDHLAAAGRVRALLAAHARVRDLVALGAYRAGGDPEADLALARLPALE 410

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FL+Q    L     F+E  ++L+
Sbjct: 411 AFLRQP---LGEPAPFEETLRRLE 431


>gi|260767969|ref|ZP_05876903.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
 gi|260615999|gb|EEX41184.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
          Length = 448

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 227/367 (61%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  + ++ Y+ P+  +G   +   +V   G   +  S+ W GRV+N LG+ +D    
Sbjct: 66  AQVVGFDHNVAYLMPIRRLGGLFAGAKVVPLEGDSTVQLSSQWLGRVVNGLGEALDDGAP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LRGGDRVSLEPKPINP--LKRRPVDTPLDVGVRTINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L ++ + K++++ A +DESP++R  A L
Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFIERNLTEHTRRKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+   G+++A+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSDNPDGSLSAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDVNAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            + +    L   + + +++  +GGY+PG D  LD+AV   P +  F
Sbjct: 364 ISRCMSAVTPEAHVTVANQFRQLYANYLQVKELLPLGGYQPGQDAELDRAVAMYPHLKAF 423

Query: 417 LKQSPSD 423
           L+QS  +
Sbjct: 424 LQQSAKE 430


>gi|330819409|ref|YP_004348271.1| Type III secretion system ATPase [Burkholderia gladioli BSR3]
 gi|327371404|gb|AEA62759.1| Type III secretion system ATPase [Burkholderia gladioli BSR3]
          Length = 452

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 154/367 (41%), Positives = 219/367 (59%), Gaps = 5/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D+  + P    E +S    V   GR   I       GRV++ LG+PIDG   L
Sbjct: 72  EVVGFTRDVALLSPFARLEHVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPPL 131

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    ++ + P  M R+ V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 132 DSDDWR-PVIVQPPDPMKRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLMG 190

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREFIE  LG D + +SVVV ATSD S + R  A  TA
Sbjct: 191 MFARGAACDINVIALIGERGREVREFIELILGPDGMARSVVVCATSDRSSMERAKAAHTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 251 TAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               + G+ITA+ +VL + +   DP+A+ VR ILDGH++L+R +A   +YP +D L S+S
Sbjct: 311 MG--QTGSITALYTVLAEDETGGDPVAEEVRGILDGHMILSREIAARNQYPAIDVLGSLS 368

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+          +  S +  L+ +  E   +  +G Y+PG + + D+A+ +  +I +FL 
Sbjct: 369 RVMSLVVPDTHNRAASRVRELMAKHREVEVLLQVGEYQPGQNPVADEAIEKADVIREFLC 428

Query: 419 QSPSDLS 425
           Q  SD +
Sbjct: 429 QRTSDYA 435


>gi|330862417|emb|CBX72576.1| putative secretion system apparatus ATP synthase ssaN [Yersinia
           enterocolitica W22703]
          Length = 451

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 162/374 (43%), Positives = 224/374 (59%), Gaps = 7/374 (1%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           + D L +V+ I      + P      +  G  +   G   R+       GRV++ LG+PI
Sbjct: 58  SPDMLAEVVAIEQQTALLSPFASSAGLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPI 117

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    L +G    E+    P  + RQ V++   TGIR ID       GQRIG+FA +G+G
Sbjct: 118 DAGPPL-RGHWR-ELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVG 175

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           KS+LLSM  R    D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R 
Sbjct: 176 KSSLLSMLCRGCRADIIVLALIGERGREVREFLEQVLTPETRARTVVVVATSDRPALERL 235

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
               TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE P    +PTSVF+ LPR
Sbjct: 236 KGIYTATTVAEYFRERGGKVLLMADSLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPR 295

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G SE+  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D
Sbjct: 296 LLERAGNSER--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAID 353

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             ASVSR+  +  SA+ + L   L H+   ++E   +  +G Y+ G DL  D+A+ + P 
Sbjct: 354 IAASVSRIMPQIVSAEHRALAQKLRHIQACYQEIELLVRVGEYQEGQDLQADEALQRYPG 413

Query: 413 IYDFLKQSPSDLSS 426
           I  FL+Q  S LSS
Sbjct: 414 ICAFLQQE-SALSS 426


>gi|283955636|ref|ZP_06373129.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792861|gb|EFC31637.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 461

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 166/425 (39%), Positives = 240/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     SA+ K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISAEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|296125411|ref|YP_003632663.1| ATPase, FliI/YscN family [Brachyspira murdochii DSM 12563]
 gi|296017227|gb|ADG70464.1| ATPase, FliI/YscN family [Brachyspira murdochii DSM 12563]
          Length = 485

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 154/352 (43%), Positives = 222/352 (63%), Gaps = 13/352 (3%)

Query: 81  ISLGDLVFHWGRFRISPSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
           I+ G++V+ + R    P +  C     G V++A GKP+ G       +  + +       
Sbjct: 90  ITFGNMVYSFER----PLSVMCCDEILGTVLDARGKPLAGGGH-NFYETPVAVSHNAVNP 144

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           MNR R++K  +TG+R ID    +  GQR+ + +G+G+GKSTLLSM AR+   D  +I+L+
Sbjct: 145 MNRPRIKKHIQTGVRAIDGLLTVGQGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALI 204

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER REVR+FIE  LG+  LK+SV+VVATSD++P+LR  A  TA TIAEYF  KG NV+ 
Sbjct: 205 GERRREVRDFIERDLGEEGLKRSVLVVATSDDAPLLRVRAAYTATTIAEYFRDKGKNVMF 264

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + REI  + GE P  RGY  SVFSEL +LLER G S   KG ITA  +VL
Sbjct: 265 MVDSVTRFALAQREIGLSRGEPPTTRGYTPSVFSELAKLLERTGTS--NKGTITAFYNVL 322

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ ++PI D+VR ILDGHIVL+R LA  G +P +D   S+SR+ ++  S   KK   
Sbjct: 323 VEGDDLDEPITDTVRGILDGHIVLSRDLANRGHFPAIDVNKSISRIMNEVVSNMHKKAAR 382

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               +   + E +++ +IGGY  G    +D+A+   P++  +L+Q   ++SS
Sbjct: 383 EFLKMSADYNEAKELIMIGGYAKGSMPEVDRAIDYKPMMDRYLQQDVYEVSS 434


>gi|315179673|gb|ADT86587.1| FliIL [Vibrio furnissii NCTC 11218]
          Length = 448

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 226/367 (61%), Gaps = 5/367 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  + ++ Y+ P+  +G   +   +V   G   +  S+ W GRV+N LG+ +D    
Sbjct: 66  AQVVGFDHNVAYLMPIRRLGGLFAGAKVVPLEGDSTVQLSSQWLGRVVNGLGEALDDGAP 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LRGGDRVSLEPKPINP--LKRRPVDTPLDVGVRTINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L +  + K++++ A +DESP++R  A L
Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFIERNLTEQARRKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+   G+++A+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSDNPDGSLSAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDVNAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            + +    L   + + +++  +GGY+PG D  LD+AV   P +  F
Sbjct: 364 ISRCMSAVTPEAHVTVANQFRQLYANYLQVKELLPLGGYQPGQDAELDRAVAMYPHLKAF 423

Query: 417 LKQSPSD 423
           L+QS  +
Sbjct: 424 LQQSAKE 430


>gi|268680771|ref|YP_003305202.1| flagellar protein export ATPase FliI [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618802|gb|ACZ13167.1| flagellar protein export ATPase FliI [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 434

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 161/411 (39%), Positives = 237/411 (57%), Gaps = 7/411 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICP 74
           K+L    G I+ I+S   T+        +GD V  V    + + LG V  ++ +  +I P
Sbjct: 13  KSLSPMFGTITKISST--TIEACGLRPSIGDIVNIVSLDSDKNELGMVTEVDRNAFFISP 70

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
            G  E   +GD VF   +  + P      GRV++   +P DG  ++G    S  IM    
Sbjct: 71  FGFIEGFKIGDKVFISEQGMMIPVGEELLGRVVDPFIRPKDGKGAIGARS-SASIMKAPL 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M R  + + F  G++ ID       GQ++G+FAGSG+ KSTL+ M  R       +++
Sbjct: 130 DPMKRGLINEPFCVGVKTIDGLLTCGKGQKMGIFAGSGVDKSTLMGMIVRGSEAPIKVVA 189

Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           L+GERGREV EFIE  LG NL+ +V++VATSD+SP++RK    +A+++AEYF ++G +VL
Sbjct: 190 LIGERGREVPEFIEKNLGGNLENTVIIVATSDDSPLMRKYGAFSAMSVAEYFKNQGRDVL 249

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
            ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E+ KG+ITA  +V
Sbjct: 250 FMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLALLPQLMERAG-KEEGKGSITAFFTV 308

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+       + KK  
Sbjct: 309 LVEGDDLSDPIADQSRSILDGHIVLSRELTDYGIYPPINIQNSASRVMGDVIETEHKKAA 368

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                L    +E   +  IG Y  G D  LD A+ +   +  FL+Q+P ++
Sbjct: 369 MRFKRLNSILKENEVLIRIGAYEKGNDKELDLAISKKEKMNSFLQQAPEEV 419


>gi|86153685|ref|ZP_01071888.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85842646|gb|EAQ59858.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 461

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 241/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S++ K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISSEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|330505658|ref|YP_004382527.1| FliI/YscN family ATPase [Pseudomonas mendocina NK-01]
 gi|328919944|gb|AEB60775.1| FliI/YscN family ATPase [Pseudomonas mendocina NK-01]
          Length = 438

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 158/375 (42%), Positives = 219/375 (58%), Gaps = 9/375 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVI 106
           V Q   S    QV+  N DI Y+ P      ++ G  VF        +I  S  W GRV+
Sbjct: 48  VEQADGSLLDAQVVGFNRDITYLMPFKKPVGLAAGSRVFPAKDEALLQIDES--WLGRVV 105

Query: 107 NALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           N LG+P+D    L G+  L +E+ S  P  + R+ VE     G+R I+    L  GQR+G
Sbjct: 106 NGLGEPLDERGKLSGRDPLPVELPSVNP--LKRRPVEAALDVGVRAINGLLTLGKGQRVG 163

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATS 224
           +FAGSG+GKS LL M  R    D V++ L+GERGREV+EFI   LG+  L+K+VVVVA +
Sbjct: 164 LFAGSGVGKSVLLGMITRQTKADVVVVGLIGERGREVQEFILHSLGEEGLRKAVVVVAPA 223

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +ESP++R  A     +IA YF  +G +VLL++DS+TR+A + REIA   GE P  +GYP 
Sbjct: 224 NESPLMRLKATELCHSIAAYFRDQGQDVLLLVDSLTRYAMAQREIALALGEPPATKGYPP 283

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           SVF  LP L+E  G  E   G+++A+ +VL +GD+H DPI D  R+ILDGHIVL+R LA+
Sbjct: 284 SVFGMLPELVESAGNGESGSGSLSAIYTVLAEGDDHQDPIVDCARAILDGHIVLSRRLAD 343

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G YP +D  ASVSR   +                   +E+ +++  +GGY PG+D   D
Sbjct: 344 VGHYPAIDISASVSRCMSQVGEPAHLAAGRQFKEFYSTYEKIKELIPLGGYTPGMDAKTD 403

Query: 405 KAVHQVPIIYDFLKQ 419
           +AV   P +  FL+Q
Sbjct: 404 RAVQLAPSLERFLRQ 418


>gi|125657204|gb|ABN48692.1| flagella biosynthesis/type III secretory pathway ATPase
           [Burkholderia pseudomallei]
          Length = 417

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 162/397 (40%), Positives = 226/397 (56%), Gaps = 9/397 (2%)

Query: 46  GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101
           G+  V +  + D +  QV+  N +  ++ P      +  G  V      G  RI  S  W
Sbjct: 23  GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRIGRS--W 80

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+ IDG  SLG GD  +         + ++ V      G+R I+    L  G
Sbjct: 81  LGRIVNGLGEAIDGRGSLG-GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRG 139

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QRIG+ AGSG+GKS LL M  R+   D V++ L+GERGREVREF++  LG+  L KSV+V
Sbjct: 140 QRIGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 199

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +DESP++R  A      IA +F   G NVLL++DS+TR+A + REIA + GE P  R
Sbjct: 200 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 259

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF  LP+L+E  G  E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R
Sbjct: 260 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 318

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   SVSR   +   A+   L   +  +I R E+ RD+  +GGY  G D
Sbjct: 319 ELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGAD 378

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              D+AV +   I  FL+Q   D++  D      K+L
Sbjct: 379 PATDEAVAKAARIDTFLRQDMLDVARHDATLAALKEL 415


>gi|251797442|ref|YP_003012173.1| ATPase, FliI/YscN family [Paenibacillus sp. JDR-2]
 gi|247545068|gb|ACT02087.1| ATPase, FliI/YscN family [Paenibacillus sp. JDR-2]
          Length = 441

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 158/371 (42%), Positives = 226/371 (60%), Gaps = 12/371 (3%)

Query: 70  VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    IS G D+V       +   +   G+V++ LGKP+DG  S     +    
Sbjct: 71  VILMPLGELHAISPGCDVVGTGKPLSVQVGSELLGKVLDGLGKPLDG--SFLPSRMQQYS 128

Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
               P   + R RV++    G+R ID    +  GQR+G+FAGSG+GKSTLL M AR+   
Sbjct: 129 THNEPSNPLARPRVQETLSIGVRAIDGLLTVGRGQRVGIFAGSGVGKSTLLGMIARNTSA 188

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREV EFIE  LG + L +SVV+VATSD+  ++R    L A +IAEYF 
Sbjct: 189 DVNVIALIGERGREVLEFIEKDLGPEGLARSVVIVATSDQPALIRIKGALIATSIAEYFR 248

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G NV+L++DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G      G+
Sbjct: 249 DRGLNVMLMMDSVTRYAMAQREVGLAIGEPPATRGYTPSVFATLPKLLERAGTGPN--GS 306

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VLVDGD+ N+PIAD+VR ILDGHIVLNR LA +G +P +D LASVSR+  +  +
Sbjct: 307 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRQLANKGHFPAIDVLASVSRVMKEIVT 366

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-- 424
            + ++  + L  L+  + ++ D+  IG Y+ G +  +D A+  +  IY F +Q  ++   
Sbjct: 367 EEHQEAANELKMLLSVYRDSEDLINIGAYQRGTNEKIDTAIENIDAIYQFTRQKTNEKVT 426

Query: 425 ---SSEDVFQE 432
              S E + QE
Sbjct: 427 LADSKERLLQE 437


>gi|146309428|ref|YP_001189893.1| FliI/YscN family ATPase [Pseudomonas mendocina ymp]
 gi|145577629|gb|ABP87161.1| ATPase, FliI/YscN family [Pseudomonas mendocina ymp]
          Length = 438

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 156/375 (41%), Positives = 219/375 (58%), Gaps = 9/375 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVI 106
           V Q   S    QV+  N DI Y+ P      ++ G  VF        +I  S  W GRV+
Sbjct: 48  VEQADGSLLDAQVVGFNRDITYLMPFKKPVGLAAGSRVFPAKDEALLQIDES--WLGRVV 105

Query: 107 NALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           N LG+P+D    L G+  L +E+ +  P  + R+ VE     G+R I+    L  GQR+G
Sbjct: 106 NGLGEPLDERGKLSGRDPLPVELPTVNP--LKRRPVEAALDVGVRAINALLTLGKGQRVG 163

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATS 224
           +FAGSG+GKS LL M  R    D V++ L+GERGREV+EF+   LG+  L+K+VVVVA +
Sbjct: 164 LFAGSGVGKSVLLGMITRQTKADVVVVGLIGERGREVQEFLLHSLGEEGLRKAVVVVAPA 223

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +ESP++R  A     +IA YF  +G +VLL++DS+TR+A + REIA   GE P  +GYP 
Sbjct: 224 NESPLMRLKATELCHSIAAYFRDQGQDVLLLVDSLTRYAMAQREIALALGEPPATKGYPP 283

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           SVF  LP L+E  G  E   G+++A+ +VL +GD+H DPI D  R+ILDGHIVL+R LA+
Sbjct: 284 SVFGMLPELVESAGNGESGSGSLSAIYTVLAEGDDHQDPIVDCARAILDGHIVLSRRLAD 343

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G YP +D  ASVSR   +                   +E+ +++  +GGY PG+D   D
Sbjct: 344 VGHYPAIDISASVSRCMSQVGEPAHLGAARQFKEFYSTYEKIKELIPLGGYTPGMDAKTD 403

Query: 405 KAVHQVPIIYDFLKQ 419
           +AV   P +  FL+Q
Sbjct: 404 RAVQLAPSLERFLRQ 418


>gi|149377885|ref|ZP_01895614.1| flagellum-specific ATP synthase [Marinobacter algicola DG893]
 gi|149357827|gb|EDM46320.1| flagellum-specific ATP synthase [Marinobacter algicola DG893]
          Length = 460

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 154/393 (39%), Positives = 228/393 (58%), Gaps = 8/393 (2%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
           V  T+ C+   + +GD  V  G+ +  +  +V+    D VY+ P+   E +  G  V   
Sbjct: 32  VGLTLECVGCPMVVGDRCVITGQGAGTVEAEVVGFEDDRVYLMPLTAIEGLRPGARVVPL 91

Query: 91  G---RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
               R  + P     GRV+N  G+P+DG   L + +  + +   +   ++R  V +    
Sbjct: 92  SVASRVPVGPE--LLGRVVNGNGEPLDGKGPL-QAEARVSLSGDIINPLDRAPVRQSMDV 148

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGREV+EFIE
Sbjct: 149 GIRAINSLMTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADITVVGLIGERGREVKEFIE 208

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           D LGD  L +SVVV + +D+SP++R  A +    IAEY+  +G  VLL++DS+TR+A + 
Sbjct: 209 DILGDEGLARSVVVASPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSLTRYAQAQ 268

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA   GE P  +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+  DPIAD
Sbjct: 269 REIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIAD 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGHIVL+R LAEEG YP +D  AS+SR+  +    +          +  R+++ 
Sbjct: 329 AARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFARAQRFKQVYSRYQQA 388

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           RD+  +G Y  G D   D A+  +  +  FL+Q
Sbjct: 389 RDLISVGAYVKGSDPETDFAITHIGNMGQFLQQ 421


>gi|255323214|ref|ZP_05364349.1| flagellar protein export ATPase FliI [Campylobacter showae RM3277]
 gi|255299737|gb|EET79019.1| flagellar protein export ATPase FliI [Campylobacter showae RM3277]
          Length = 434

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 238/413 (57%), Gaps = 7/413 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G I  I++    ++ L     +GD V    + K+   L  V  +  +   I P G  E  
Sbjct: 21  GVIERISATTIEISGLRP--SIGDIVQICAKDKSKSGLAMVTEVRQNTALISPFGFVEGY 78

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +GD V+   +  +I       GRV++    P DG  ++   + +  IM     AM R  
Sbjct: 79  KIGDFVYQSDQGMKIPVGDALLGRVVDPFMNPKDGKGAIAATEYA-PIMRAPIDAMKRGL 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  ++      +++L+GERGR
Sbjct: 138 IDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNSQAPIKVVALIGERGR 197

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EV EFIE  L  +L  +VV+VATSD+SP++RK     A+++AEYF ++G +VL I+DS+T
Sbjct: 198 EVPEFIEKNLRGDLSGTVVIVATSDDSPLMRKYGAFCAMSVAEYFKNQGKDVLFIMDSVT 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI    GE P ++GYP SV + LP+L+ER G  E+ KG+ITA  +VLVDGD+ 
Sbjct: 258 RFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-KEEGKGSITAFFTVLVDGDDM 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +DPIAD  RSILDGHIVL+R + + G YPP++ L S SR+     + + +   + L  L 
Sbjct: 317 SDPIADQSRSILDGHIVLSREMTDFGIYPPINILNSASRVMSDIATKEHRANAAKLKRLY 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
              +E   +  IG Y+ G D  LD A+ +   I +FLKQ   +  S +  QE+
Sbjct: 377 SLLKENEVLLRIGAYQKGSDKELDLAISKKEFIDNFLKQDAEEGFSFEQTQEL 429


>gi|284006893|emb|CBA72162.1| type III secretion system ATPase [Arsenophonus nasoniae]
          Length = 429

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 214/355 (60%), Gaps = 18/355 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           +CP G    + +G  +               G+V++ LG P   ++ + + +    I   
Sbjct: 78  VCPTGTSHLVGVGRHLL--------------GKVLDGLGNPFTAENYI-EPEQWYPIYRD 122

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  M R+ +EK    GIR ID       GQR+G+FA +G GKSTL +   RS   D ++
Sbjct: 123 APAPMQRKLIEKPLSLGIRAIDGLLTCAEGQRMGIFAAAGGGKSTLFASLIRSADVDVIV 182

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE+ LG+  LK+SV++VATSD   I R  A   A +IAEYF  +  
Sbjct: 183 LALIGERGREVREFIEEDLGEEGLKRSVLIVATSDRPAIERAKAGFVATSIAEYFRDQNM 242

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL+ER G S+K  G+ITA+
Sbjct: 243 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLMERAGQSDK--GSITAL 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP +D L SVSR+ D+  S   +
Sbjct: 301 YTVLVEGDDMTEPIADETRSILDGHIILSRKLAAASHYPAIDVLRSVSRVMDRVISRKHQ 360

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +    L   + ++EE   +  IG Y+PG D + D+A+ + P I  +L QS  + S
Sbjct: 361 QQAQQLRKWLAKYEEIELLLQIGEYQPGNDQLADEAIKRYPQIQSWLCQSTDEKS 415


>gi|94314183|ref|YP_587392.1| flagellum-specific ATP synthase [Cupriavidus metallidurans CH34]
 gi|93358035|gb|ABF12123.1| flagellum-specific ATP synthase [Cupriavidus metallidurans CH34]
          Length = 486

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 154/336 (45%), Positives = 207/336 (61%), Gaps = 14/336 (4%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA------MNRQRVEKG 144
           G  R+       GRV++A G+P+DG   LG     +   S+VP A      + R  +E  
Sbjct: 133 GSKRLPVGDGLLGRVLDAAGRPLDG---LGP----ITAASEVPLAGTQINPLTRAPIETV 185

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
             TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+E
Sbjct: 186 LDTGVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTNADVIVVGLIGERGREVKE 245

Query: 205 FIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           FIE+ LG+   K+SVVV A +D SP+LR      A  +AEYF  KG +VLLI+DS+TR+A
Sbjct: 246 FIENILGEEGRKRSVVVAAPADTSPLLRMQGAAYATRLAEYFRDKGQHVLLIMDSLTRYA 305

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            + REIA   GE P  +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DP
Sbjct: 306 MAQREIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDP 365

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           IADS R+ILDGHIVL+RSLAE G YP +D  AS+SR       A +   V     L+ R+
Sbjct: 366 IADSARAILDGHIVLSRSLAEAGHYPAIDVEASISRAMTALIDAPQFASVRRFKQLMSRY 425

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  RD+  +G Y PG D  LD A+   P +  FL+Q
Sbjct: 426 QRNRDLISVGAYVPGSDPELDLAIRMYPRMEAFLQQ 461


>gi|187934498|ref|YP_001885044.1| flagellar protein export ATPase FliI [Clostridium botulinum B str.
           Eklund 17B]
 gi|187722651|gb|ACD23872.1| flagellar protein export ATPase FliI [Clostridium botulinum B str.
           Eklund 17B]
          Length = 435

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 154/327 (47%), Positives = 214/327 (65%), Gaps = 5/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G +I+ LGKP+ G++ +   D  +E  +  P  + R+R+++   TGIR ID F     GQ
Sbjct: 102 GEIIDGLGKPLRGEELVQGEDYPLE--NNPPDPLKRKRIKEIMPTGIRAIDGFLTCGDGQ 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKST L M AR    D  +I+L+GERGREV EFIE  LG + +KKSVVV 
Sbjct: 160 RIGIFAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLEFIEKDLGPEGMKKSVVVC 219

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R    LTA  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +G
Sbjct: 220 ATSDKPALIRLKGALTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKG 279

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF++LP+L+E+ G SE   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RS
Sbjct: 280 YTPSVFAKLPKLMEKSGTSED--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRS 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA +  YP +D L SVSRL +    ++  K  S    L+  ++E+ D+  IG Y  G + 
Sbjct: 338 LAHKNHYPAIDILNSVSRLMNSIAPSEHIKAASIARDLLATYKESEDLINIGAYVKGSNK 397

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +D A+     I +FL+Q+ ++ S+ D
Sbjct: 398 KIDLAISYHDKIEEFLRQTVNEKSNFD 424


>gi|146278633|ref|YP_001168792.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556874|gb|ABP71487.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17025]
          Length = 436

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 162/401 (40%), Positives = 233/401 (58%), Gaps = 2/401 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ I       T L+    LGD V+  G N +  G+V+R++   V I P    E +S+
Sbjct: 22  GRVTEIARGTIAATGLTSGAGLGDRVIVHGTNGEIGGEVLRLSHQEVTILPDAAIEGLSI 81

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           GD V   G   I+P   W GR+++ LG+P+DG   L +G ++  + +  PPA  R+ +  
Sbjct: 82  GDQVELVGSAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPIARPLRAPAPPAARRRSLGP 140

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
              TG+ V D   PL  GQR G+FAGSG+GKS+LL+ FAR    D V+I L+GERGRE+R
Sbjct: 141 RLPTGVAVFDTMLPLVQGQRTGLFAGSGVGKSSLLAKFARGVGADVVVIGLIGERGRELR 200

Query: 204 EFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           +F E  LG   + +SVVV ATSD+SP++R+     A+ +AE+F  +G +VLL+ DSITRF
Sbjct: 201 DFTERVLGARGMARSVVVTATSDQSPLMRRRCGWAAMAVAEHFRDQGLHVLLLADSITRF 260

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + RE+A   GE    RG+P S    +  L ER GP  +  G+ITAV SVLV G +  +
Sbjct: 261 AEAHREVALAGGEEASMRGFPPSTAHTIMSLAERAGPGAEGTGDITAVFSVLVAGSDMEE 320

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+AD +R +LDGH+V++R +AE GR+P +D L SVSR    A S  E  L+     L+  
Sbjct: 321 PVADILRGVLDGHVVMDRRIAERGRFPAIDLLRSVSRSLPDAASDPENDLIVEARRLLGA 380

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           ++    +   G Y  G D  +D A+   P +  FL +   D
Sbjct: 381 WDRAEMMIQAGLYAKGSDPQVDAAIRVWPALDGFLAEDAPD 421


>gi|218703514|ref|YP_002411033.1| lateral flagellar export/assembly protein [Escherichia coli UMN026]
 gi|293403344|ref|ZP_06647435.1| fliI [Escherichia coli FVEC1412]
 gi|298378956|ref|ZP_06988837.1| fliI [Escherichia coli FVEC1302]
 gi|218430611|emb|CAR11477.1| Flagellum-specific ATP synthase, Lateral flagellar export/assembly
           protein [Escherichia coli UMN026]
 gi|291429197|gb|EFF02217.1| fliI [Escherichia coli FVEC1412]
 gi|298280069|gb|EFI21573.1| fliI [Escherichia coli FVEC1302]
          Length = 445

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 155/383 (40%), Positives = 224/383 (58%), Gaps = 13/383 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S D ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLDHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FL+Q   D+      + +  +LQ
Sbjct: 415 FLRQ---DMREPAALELVQSRLQ 434


>gi|134280666|ref|ZP_01767376.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
 gi|167725915|ref|ZP_02409151.1| flagellum-specific ATP synthase [Burkholderia pseudomallei DM98]
 gi|167905075|ref|ZP_02492280.1| flagellum-specific ATP synthase [Burkholderia pseudomallei NCTC
           13177]
 gi|134247688|gb|EBA47772.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
          Length = 435

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 162/397 (40%), Positives = 226/397 (56%), Gaps = 9/397 (2%)

Query: 46  GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101
           G+  V +  + D +  QV+  N +  ++ P      +  G  V      G  RI  S  W
Sbjct: 41  GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRIGRS--W 98

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+ IDG  SLG GD  +         + ++ V      G+R I+    L  G
Sbjct: 99  LGRIVNGLGEAIDGRGSLG-GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QRIG+ AGSG+GKS LL M  R+   D V++ L+GERGREVREF++  LG+  L KSV+V
Sbjct: 158 QRIGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +DESP++R  A      IA +F   G NVLL++DS+TR+A + REIA + GE P  R
Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF  LP+L+E  G  E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R
Sbjct: 278 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   SVSR   +   A+   L   +  +I R E+ RD+  +GGY  G D
Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGAD 396

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              D+AV +   I  FL+Q   D++  D      K+L
Sbjct: 397 PATDEAVAKAARIDTFLRQDMLDVARHDATLAALKEL 433


>gi|15834665|ref|NP_296424.1| type III secretion system ATPase [Chlamydia muridarum Nigg]
 gi|270284830|ref|ZP_06194224.1| type III secretion system ATPase [Chlamydia muridarum Nigg]
 gi|270288859|ref|ZP_06195161.1| type III secretion system ATPase [Chlamydia muridarum Weiss]
 gi|301336210|ref|ZP_07224412.1| type III secretion system ATPase [Chlamydia muridarum MopnTet14]
 gi|7190080|gb|AAF38931.1| type III secretion cytoplasmic ATPase SctN [Chlamydia muridarum
           Nigg]
          Length = 442

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 161/386 (41%), Positives = 239/386 (61%), Gaps = 16/386 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V++ P+G    +S    V   G    I   A   GRV+N LG+PID +   
Sbjct: 61  EVVGFTQNFVFLSPLGELSGVSPSSEVIATGLPLHIRAGAGLLGRVLNGLGEPIDIET-- 118

Query: 120 GKGDL----SMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            KG L    S+  + K PP  ++R+++     TG+R ID    +  GQRIG+FAG+G+GK
Sbjct: 119 -KGPLENVDSIYPIFKAPPDPLHREKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGK 177

Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           S+LL M AR ++  D  +I+L+GERGREVREFIE+ LG+  +K+SV+VV+TSD+S  LR 
Sbjct: 178 SSLLGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRL 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+
Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPK 297

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G S  EKG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D
Sbjct: 298 LLERAGAS--EKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAID 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  
Sbjct: 356 VLASISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FLKQ   D+  +  ++E  ++L+
Sbjct: 416 LNRFLKQ---DIHEKTNYEEAAQQLR 438


>gi|171915738|ref|ZP_02931208.1| type III secretion system ATPase [Verrucomicrobium spinosum DSM
           4136]
          Length = 444

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 157/385 (40%), Positives = 227/385 (58%), Gaps = 16/385 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           + +V+    ++V + P+G  E IS    V   G   R+       GRV++ LG P DG  
Sbjct: 65  MAEVVGFAKNLVLLTPLGELEGISSSTEVTPTGEVHRVPVGPAMLGRVLDGLGNPSDG-- 122

Query: 118 SLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
              KG + +E    + +  P AM RQ +      G+R +D       GQR+G+FA +G G
Sbjct: 123 ---KGPIEIEEYYAVTADPPNAMTRQLISTPIHLGVRALDGLLTCGEGQRMGIFAAAGGG 179

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           KSTLLS   R+   D V++SL+GERGREVREF+E  LG D +K++V V+ATSD   + R 
Sbjct: 180 KSTLLSQIIRNTEADIVVLSLIGERGREVREFLERDLGEDGVKRAVTVIATSDRPAMERL 239

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
                A  IAEYF  KG  VLL++DS+TRFA ++REI   +GE P  RG+P SVF+ LP+
Sbjct: 240 KCAYVATAIAEYFRDKGRKVLLLMDSVTRFARALREIGLAAGEPPTRRGFPPSVFATLPK 299

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ++ER G S    G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R L     YP +D
Sbjct: 300 MMERAGCSAN--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLGSANHYPAID 357

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LASVSRL     + D ++    L +L+ +++E   +  IG Y+ G D   D+A+ +V  
Sbjct: 358 VLASVSRLMTAIATPDHQRAAGKLRNLLAKYQEVELLVRIGEYKKGSDASSDEAIAKVDA 417

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I +FLKQ    L  +  F++  + +
Sbjct: 418 INNFLKQG---LREQSTFEQTLQAM 439


>gi|168187563|ref|ZP_02622198.1| flagellar protein export ATPase FliI [Clostridium botulinum C str.
           Eklund]
 gi|169294576|gb|EDS76709.1| flagellar protein export ATPase FliI [Clostridium botulinum C str.
           Eklund]
          Length = 438

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 171/427 (40%), Positives = 247/427 (57%), Gaps = 19/427 (4%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           Y++ LV Q   +  +T     +      VC     ++  +N   + +V+    D V + P
Sbjct: 21  YTEGLVKQ---VIGLTIEVEGIKAFVGEVC----TIYNKENEPIMCEVVGFKEDNVILMP 73

Query: 75  VGIGEEISLGD---LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +GE I +G    +V       +  S    G+V+N LGKP++ ++ L  G +   + + 
Sbjct: 74  --LGELIGIGPGCRVVPSKKYLSVKCSEKLLGKVLNGLGKPLNVEEKLPLG-IDYPLDTA 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  + R+R++    TG+R ID F     GQRIG+FAGSG+GKST L M AR    D  +
Sbjct: 131 PPDPLRRRRIKDEIATGVRAIDGFLTCGEGQRIGIFAGSGVGKSTTLGMIAREAKADINV 190

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREV +FIE  LG+  LKKSV+V ATSD+  ++R     TA  IAEYF  KG 
Sbjct: 191 IALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFTATAIAEYFRDKGK 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LPRL+ER G S+K  G+ITA 
Sbjct: 251 KVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSDK--GSITAF 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D L SVSRL  +    + K
Sbjct: 309 YTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDILNSVSRLMSEIAKDEHK 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           K  S    L+  ++ + D+  IG Y  G +  +D A+     + ++L+Q   + S    F
Sbjct: 369 KAASKARDLLATYKNSEDLINIGAYVKGSNPKVDMAIQYNDKLNEYLRQGIKEHSE---F 425

Query: 431 QEITKKL 437
           QE   +L
Sbjct: 426 QESVTRL 432


>gi|293408356|ref|ZP_06652195.1| flagellar protein export ATPase FliI [Escherichia coli B354]
 gi|291471534|gb|EFF14017.1| flagellar protein export ATPase FliI [Escherichia coli B354]
          Length = 445

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 155/383 (40%), Positives = 224/383 (58%), Gaps = 13/383 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSESS-GSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S D ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLDHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FL+Q   D+      + +  +LQ
Sbjct: 415 FLRQ---DMREPAALELVQSRLQ 434


>gi|78778279|ref|YP_394594.1| flagellum-specific ATP synthase [Sulfurimonas denitrificans DSM
           1251]
 gi|78498819|gb|ABB45359.1| ATPase FliI/YscN [Sulfurimonas denitrificans DSM 1251]
          Length = 436

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 168/425 (39%), Positives = 239/425 (56%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73
           +K   V  G +  I +   T   LS  V + D V  +      + +G V  I+  I +I 
Sbjct: 12  NKKYSVAFGEVVKINATVITARGLS--VSISDIVKIISNESAQETIGMVTEIDGLIFFIT 69

Query: 74  PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P    E    GD VF       I  S+   GRV++   +PIDG  S+    LS  I + +
Sbjct: 70  PFSFVEGFRSGDRVFLDQTGLNIPVSSSLLGRVVDPFMRPIDGKGSINDSKLSPIIKAPI 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
             AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       ++
Sbjct: 130 A-AMKRGMIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGANAPIKVV 188

Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           +L+GERGREV EFIE  LG NL+ +V+VVATSD+SP++RK     A+++AE+F  +G +V
Sbjct: 189 ALIGERGREVPEFIEKNLGGNLENTVIVVATSDDSPLMRKYGAFAAMSVAEFFKDQGLDV 248

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E+ KG+ITA  +
Sbjct: 249 LFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGKGSITAFFT 307

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL++GD+  DPIAD  RSILDGHIVL+R + + G YPPV  L S SR+ +   + +  + 
Sbjct: 308 VLIEGDDMGDPIADQSRSILDGHIVLSREMTDFGIYPPVHILNSASRVMNDIITPEHLRA 367

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           V     L    +E   +  IG Y  G D  LD+A+ +   +  FL Q+ S  S  D   E
Sbjct: 368 VQKFRRLYTLLKENEVLIRIGAYTKGSDSELDEAMAKKSEMEKFLMQNSSTQSDFDETVE 427

Query: 433 ITKKL 437
              KL
Sbjct: 428 TLLKL 432


>gi|119469988|ref|ZP_01612793.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7]
 gi|119446698|gb|EAW27971.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7]
          Length = 444

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 144/332 (43%), Positives = 211/332 (63%), Gaps = 6/332 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GRV++ LG+P+DG   LGK   +  ++        + R+ + +    G+R I+    
Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHYLKFAQNTINPLARRPISQPMDVGVRAINSVIT 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKK 216
           +  GQR+G+FAGSG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG+   K+
Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGEEGRKR 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVV A +D SP++R     +AVTIAEYF  +G NVLL+LDS+TR+A + REIA   GE 
Sbjct: 220 SVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP SVF++LP L+ER G   + +G ITA  +VL +GD+  DPIAD+ R+ILDGHI
Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGAITAFFTVLSEGDDMQDPIADAARAILDGHI 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LA+ G YP +D   S+SR+  +  S    +    L  +   +++ +D+  +G Y+
Sbjct: 340 VLSRELADSGHYPAIDIEKSISRVMPQVVSEPHMQQARVLKQVYSMYQQNKDMITLGAYQ 399

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            G D +LD+A++ +P +  FL+Q   D+ S D
Sbjct: 400 KGTDPMLDQAINMMPRVNGFLQQGMRDVISYD 431


>gi|288553062|ref|YP_003424997.1| flagellum-specific ATP synthase [Bacillus pseudofirmus OF4]
 gi|288544222|gb|ADC48105.1| flagellum-specific ATP synthase [Bacillus pseudofirmus OF4]
          Length = 435

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 152/362 (41%), Positives = 226/362 (62%), Gaps = 5/362 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V + P+   +EI+ G LV   G    I   +   G+V++  G+ +D    L
Sbjct: 58  EVVGFRDEYVLLMPLNGIQEIAPGSLVEATGSPLEIKVGSGLIGKVVDGCGELLD-QQKL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG  S    ++ P  + R R+E     G+R ID    +  GQRIG+FAGSG+GKSTLL+
Sbjct: 117 PKGLTSFPTDNEPPNPLKRPRIEHAMSLGVRAIDSLFTVGKGQRIGIFAGSGVGKSTLLA 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M A++   D  +I+L+GERGREV++FIE  LG + L ++++VVATSD+  ++R    +TA
Sbjct: 177 MLAKNSSADLNVIALIGERGREVKDFIERDLGAEGLSRTILVVATSDQPALMRIKGAMTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF ++G +V L++DS+TRFA + RE+   +GE P  +GY  SVF+ LP+LLER G
Sbjct: 237 TAIAEYFRNQGLDVNLMMDSVTRFAMAQREVGLATGEPPTTKGYTPSVFAMLPKLLERSG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG+ITA  +VLVDGD+ N+PIAD+VR ILDGH+VL+R LA +G++P ++ L SVS
Sbjct: 297 --TDAKGSITAFYTVLVDGDDMNEPIADAVRGILDGHLVLDRKLANKGQFPAINVLKSVS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +   K+    +  LI  +EE  D+  IG Y+ G    +D+A+   P I +FL 
Sbjct: 355 RVMSDLVNPIHKQAAERVRKLIATYEEAEDLINIGAYKRGSSKEIDEAIQAYPAIIEFLT 414

Query: 419 QS 420
           Q+
Sbjct: 415 QA 416


>gi|254445953|ref|ZP_05059429.1| flagellar protein export ATPase FliI [Verrucomicrobiae bacterium
           DG1235]
 gi|198260261|gb|EDY84569.1| flagellar protein export ATPase FliI [Verrucomicrobiae bacterium
           DG1235]
          Length = 440

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 156/356 (43%), Positives = 222/356 (62%), Gaps = 5/356 (1%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+    G  +I       GRV++ +G+PIDG   +   D    +  KVP  + R+R+   
Sbjct: 88  DVKLSSGFNKIPSGNEVLGRVVDGMGRPIDGIGPMHYQDPG-SMTGKVPNPLLRKRITVP 146

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F TG++ ID+F+P+  GQR+GVFAGSG+GKSTLL M AR    D  +I+LVGERGRE+RE
Sbjct: 147 FNTGVKAIDLFSPVGEGQRMGVFAGSGVGKSTLLGMLARGSNADVNVIALVGERGRELRE 206

Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           FIE  LG + + ++VVVVATSD+S  +R  A   A +IAE F   G  VL ++DS+TRFA
Sbjct: 207 FIEKDLGPEGMARTVVVVATSDQSAPMRLRAANMATSIAENFRDSGKRVLFLMDSVTRFA 266

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            + REI    GE P +RGY  SVFS LPRLLER G S  +KG ITA  +VLV+GD+ N+P
Sbjct: 267 MAQREIGLAVGEPPASRGYTPSVFSTLPRLLERSGNS--DKGTITAFYTVLVEGDDLNEP 324

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           IAD+VR ILDGHIVL+R LA    +P +D L S+SRL +   + +E          +  +
Sbjct: 325 IADAVRGILDGHIVLSRQLATANHFPAIDVLESISRLRNDISTEEELATAGLARDYLALY 384

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
            +  DI  +G Y  G +  +D A+     + ++LKQS ++ +  E+ +Q++ + ++
Sbjct: 385 RKNEDIVNLGAYVRGANQKIDAAIIANERVMNYLKQSYTECVPREECYQKLAELIR 440


>gi|77918793|ref|YP_356608.1| flagellum-specific ATP synthase FliI [Pelobacter carbinolicus DSM
           2380]
 gi|77544876|gb|ABA88438.1| type III secretion system ATPase, FliI/YscN [Pelobacter
           carbinolicus DSM 2380]
          Length = 433

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 150/322 (46%), Positives = 209/322 (64%), Gaps = 3/322 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+A+G+PID D  L   +  M + +     M R  ++     GIR I+       GQ
Sbjct: 98  GRVIDAMGQPID-DGPLPVRETDMPLYALPAGPMERDTIDTPLDLGIRAINGLLTCGQGQ 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+ AGSG+GKSTLL M A++   D  +I+L+GERGREVREFIE  LG + L +SVV+V
Sbjct: 157 RMGIMAGSGVGKSTLLGMIAQNTQADVNVIALIGERGREVREFIERDLGPEGLARSVVIV 216

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+SP+LR      A T+AEYFSS+G NVLL++DS+TRFA ++RE+    GE P  +G
Sbjct: 217 ATSDQSPLLRMRGAFVATTVAEYFSSQGLNVLLMMDSVTRFAMAMREVGLAIGEPPTTKG 276

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF+ LP+LLER G S +  G+IT + +VLV+GD+ N+PIAD+VRSILDGHIVL+R 
Sbjct: 277 YTPSVFATLPKLLERAG-SFRNSGSITGLYTVLVEGDDMNEPIADAVRSILDGHIVLSRR 335

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA +  YP +D L S SR+ +       + L   L  ++  +EE  D+  IG Y+ G + 
Sbjct: 336 LAAKNHYPCIDILHSASRVMNAVVDPGHQDLAGRLREILATYEEAEDLINIGAYKKGSNP 395

Query: 402 ILDKAVHQVPIIYDFLKQSPSD 423
            +D A+  +  +  FL+Q  S+
Sbjct: 396 KIDTALSHIDNVLRFLRQRVSE 417


>gi|194292869|ref|YP_002008776.1| flii: flagellar biosynthesis protein; flagellum-specific ATP
           synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193226773|emb|CAQ72724.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Cupriavidus taiwanensis LMG 19424]
          Length = 502

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 152/333 (45%), Positives = 209/333 (62%), Gaps = 8/333 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAMNRQRVEKGFKT 147
           G  R+   A   GRV++A G+P+DG   LG    +ME+     ++ P M R  +E    T
Sbjct: 140 GSKRLPVGAGLLGRVLDAAGRPLDG---LGPLAAAMEVPLAGEQINPLM-RAPIETVLDT 195

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE
Sbjct: 196 GVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIE 255

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           + LG +  ++SVVV A +D SP+LR      A  +AEYF  +G +VLLI+DS+TR+A + 
Sbjct: 256 NILGPEGRRRSVVVAAPADCSPLLRMQGAAYATRLAEYFRDQGQHVLLIMDSLTRYAMAQ 315

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA   GE P  +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIAD
Sbjct: 316 REIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDPIAD 375

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           S R+ILDGHIVL+RSLAE G YP +D  AS+SR        ++   V     L+ R++  
Sbjct: 376 SARAILDGHIVLSRSLAEAGHYPAIDVEASISRAMTALIPHEQFGSVRRFKQLMSRYQRN 435

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           RD+  +G Y PG D  LD A+   P +  FL+Q
Sbjct: 436 RDLISVGAYVPGNDPELDLAIQLHPRMEAFLQQ 468


>gi|157147117|ref|YP_001454436.1| hypothetical protein CKO_02894 [Citrobacter koseri ATCC BAA-895]
 gi|157084322|gb|ABV14000.1| hypothetical protein CKO_02894 [Citrobacter koseri ATCC BAA-895]
          Length = 439

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 150/365 (41%), Positives = 215/365 (58%), Gaps = 4/365 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + D+ Y+ P      +  G  VF  G+   +     W GRV+N LG+P+D    L
Sbjct: 59  QVVGFDRDVTYLMPFKHPSGLIAGARVFPAGKTEGVMIGDQWLGRVVNGLGEPLDNKGKL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G   L  + + +V P + RQ V      G+R I+    +  GQR+G+ AGSG+GKS LL 
Sbjct: 119 GGDTLLAQQLPQVHP-LKRQPVHAPLDVGVRAINGLLTIGKGQRVGLMAGSGVGKSVLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    + V++ L+GERGREV+EFIE+ L  + L KSV+V A +DESP++R  A    
Sbjct: 178 MITRYTRAEVVVVGLIGERGREVKEFIENALQAEGLAKSVIVAAPADESPLMRIKATELC 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S F  +PRL+E  G
Sbjct: 238 HTIASYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPRLVESAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            SE E G++TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+S
Sbjct: 298 NSESE-GSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRHLAEAGHYPAIDVGQSIS 356

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R   +    + +    +L  L   ++  + +  +GGY  G D + D+AV   P I  FL+
Sbjct: 357 RCMSQVTEREHQLAARTLKQLYAEYQSIKPLIPLGGYVAGADPLADRAVRLSPAINQFLQ 416

Query: 419 QSPSD 423
           Q   D
Sbjct: 417 QEVQD 421


>gi|160902822|ref|YP_001568403.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95]
 gi|160360466|gb|ABX32080.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95]
          Length = 442

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 172/419 (41%), Positives = 252/419 (60%), Gaps = 16/419 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G IS I  V  T+  +   V LGD    + K+   +  + +  + + V + P+     I 
Sbjct: 27  GKISRIVGV--TIESIGPSVALGDLCRIKLKDGSKIFAETVGFSDNKVLLMPLEDVSGIY 84

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           +G  V     +  +  S+   G V++ LG+ +DG  S  K   S  I    P  + R R+
Sbjct: 85  VGAPVERVDSKINVKISSDLLGHVLDGLGRSMDG--SKVKSYESKSIYRSAPNPLLRNRI 142

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++    G+R ID F  L  GQRIG+ AGSG+GKSTLL M AR+   D  +I L+GERGRE
Sbjct: 143 KEPLSVGVRAIDAFLTLGKGQRIGIMAGSGVGKSTLLGMIARNTEADINVIGLIGERGRE 202

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V++FIE  LG+  LKKSV++V+TSD   +LR  A  TA TIAEYF   G NVL+++DSIT
Sbjct: 203 VKDFIEKDLGEEGLKKSVLIVSTSDSPALLRVKALYTATTIAEYFRDLGYNVLMMVDSIT 262

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + REI  + GE P  RGY  SVF+ +P++LER G S  +KG++TA+ +VLV+ D+ 
Sbjct: 263 RWAMAQREIGLSIGEPPTTRGYTPSVFANMPKILERAGNS--QKGSMTAIYTVLVEADDM 320

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL--TH 378
           NDPI D+VRSI+DGHIVL+RSLA+   YPP+D L+SVSRL  +    DEK L +++    
Sbjct: 321 NDPIGDAVRSIVDGHIVLSRSLADSSHYPPIDILSSVSRLMKEV--VDEKHLKAAMFIRD 378

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   +  ++D+  +G Y+ G +  +D A+ ++  I +FL Q    +  +  F++  KKL
Sbjct: 379 IYASYMNSKDLIEVGAYKKGSNKKVDIALEEIENINNFLTQR---IEEKAPFEQTLKKL 434


>gi|119715003|ref|YP_921968.1| FliI/YscN family ATPase [Nocardioides sp. JS614]
 gi|119535664|gb|ABL80281.1| type III secretion system ATPase, FliI/YscN [Nocardioides sp.
           JS614]
          Length = 435

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 166/405 (40%), Positives = 242/405 (59%), Gaps = 9/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  +  +  TV+ +S    LGD +  QG       +V+     ++   P+G    + +
Sbjct: 22  GRVVGLLGLRVTVSGVS--AALGDLLEVQGLTGPVPVEVVASGDGMLTCLPLGDTTGLRV 79

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQRV 141
           GD V + G   RI       GRV++ LG+P+D  D     DL   ++  +PPA ++R R+
Sbjct: 80  GDHVVNHGEGLRIPVGEALRGRVLDGLGRPMD--DGPALDDLPTVVVDNLPPAALSRPRI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++    G+R +D       GQR+G+ AGSG+GKS+LLSM AR    +  +I+L+GERGRE
Sbjct: 138 DQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSLLSMIARGTDAEISVIALIGERGRE 197

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E+ LG   L++S+VVVATSDE P++R  A   A  IAE+F   G +V+L++DS+T
Sbjct: 198 VREFLENDLGPAGLRRSIVVVATSDEPPVVRLRAAFVATRIAEWFRDSGRHVVLMMDSLT 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R A + REI  ++GE P  RG+P SVF+ LPRLLER G S   +G+IT + +VLV+GD+ 
Sbjct: 258 RVALAQREIGLSAGEPPATRGFPPSVFALLPRLLERAGTS--PEGSITGLYTVLVEGDDL 315

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPI DS RSILDGH+VL+R LA  G +P +D L S+SR+A        +     L  L+
Sbjct: 316 QDPIGDSARSILDGHVVLSRDLATSGHFPSIDVLESISRVASAIIEPSGRADGIRLRRLL 375

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   R++  IG Y  G D   D A+  +P I DFL+Q  SD++
Sbjct: 376 AAYRSVRELVEIGAYVAGSDADADDALALMPRINDFLRQDMSDVT 420


>gi|225619607|ref|YP_002720864.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Brachyspira hyodysenteriae WA1]
 gi|225214426|gb|ACN83160.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Brachyspira hyodysenteriae WA1]
          Length = 484

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 165/395 (41%), Positives = 237/395 (60%), Gaps = 20/395 (5%)

Query: 42  YVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC 100
           +  LGD   ++   NS    + I      V +   G    I+ G++V+ + R    P + 
Sbjct: 50  FCKLGDMCRIYMNDNSYLDAEAIGFRNQDVLLATYGPVNGITFGNMVYSFER----PLSV 105

Query: 101 WC-----GRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVEKGFKTGIRVI 152
            C     G V++A GKP+ G    G       I    S V P MNR R+ K  +TG+R I
Sbjct: 106 MCCDEILGTVLDARGKPLAGG---GHNFYETPIPVSHSAVNP-MNRPRINKHIQTGVRAI 161

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           D    +  GQR+ + +G+G+GKSTLLSM AR+   D  +I+L+GER REVR+FIE  LG+
Sbjct: 162 DGLLTVGQGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALIGERRREVRDFIERDLGE 221

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             LK+S++VVATSD++P+LR  A  TA TIAEYF  KG NV+ ++DS+TRFA + REI  
Sbjct: 222 EGLKRSILVVATSDDAPLLRVRAAYTATTIAEYFRDKGKNVMFMVDSVTRFALAQREIGL 281

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE P  RGY  SVFSEL +LLER G S   KG+ITA  +VLV+GD+ ++PI D+VR I
Sbjct: 282 SRGEPPTTRGYTPSVFSELAKLLERTGTS--SKGSITAFYNVLVEGDDLDEPITDAVRGI 339

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIVL+R LA  G +P +D   S+SR+ ++  S   K+       +   + E +++ +
Sbjct: 340 LDGHIVLSRDLANRGHFPAIDVNKSISRIMNEVVSNMHKRAAREFLKMSADYNEAKELIM 399

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           IGGY  G    +D+A+   P++  +L+Q   ++SS
Sbjct: 400 IGGYAKGSMPEVDRAIDYKPMMDRYLQQDVYEVSS 434


>gi|57168630|ref|ZP_00367762.1| flagellum-specific ATP synthase [Campylobacter coli RM2228]
 gi|305432742|ref|ZP_07401902.1| flagellar protein export ATPase FliI [Campylobacter coli JV20]
 gi|57019911|gb|EAL56591.1| flagellum-specific ATP synthase [Campylobacter coli RM2228]
 gi|304444251|gb|EFM36904.1| flagellar protein export ATPase FliI [Campylobacter coli JV20]
          Length = 461

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAVFGEITKISATSIEIRGLKTGV--GDIIKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMGDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAIAKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|167567363|ref|ZP_02360279.1| flagellum-specific ATP synthase [Burkholderia oklahomensis EO147]
          Length = 435

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 167/380 (43%), Positives = 232/380 (61%), Gaps = 24/380 (6%)

Query: 61  QVIRINLDIVYICP----VGI--GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID 114
           QV+  N +  Y+ P    VG+  G ++   D     G  R+  +  W GRVIN LG+PID
Sbjct: 57  QVVGFNREESYLMPFKKPVGLVAGAQVLARD---RKGALRVGRA--WLGRVINGLGEPID 111

Query: 115 GDDSLGKGDLSMEIMSKVPPAMN--RQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           G   LG GD   +++++ P A+N  R+R V      G+R I+    L  GQR+G+ AGSG
Sbjct: 112 GHGPLG-GD---QVLNEKPAAVNPLRKRAVRDVLDVGVRAINGALTLGKGQRVGLMAGSG 167

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230
           +GKS LL M  R+   D V++ L+GERGREVREF+E  LGD  L K+V+VVA +DESP++
Sbjct: 168 VGKSVLLGMMTRATAADVVVVGLIGERGREVREFVEHALGDEGLAKAVLVVAPADESPLM 227

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R  A      IA ++   G +VLL++DS+TR+A + REIA + GE P  RGYP SVF  L
Sbjct: 228 RLRAAELCHAIAAHYRDAGSDVLLLVDSLTRYAMAQREIALSLGEPPATRGYPPSVFGML 287

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P+L+E  G  E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL+R LAE G YP 
Sbjct: 288 PQLVETAGNGEG-SGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLSRELAERGHYPA 346

Query: 351 VDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           +D   SVSR    A  AD + +V +  L  +I R E+ RD+  +GGY  G D   D+AV 
Sbjct: 347 IDVTRSVSRC--MAQIADARHVVRAGQLKEMIGRHEQVRDLIPLGGYVQGADAATDRAVA 404

Query: 409 QVPIIYDFLKQSPSDLSSED 428
               I  FL+Q   + +S D
Sbjct: 405 MAERIGAFLRQPMHEAASFD 424


>gi|118442915|ref|YP_877978.1| flagellum-specific ATP synthase [Clostridium novyi NT]
 gi|118133371|gb|ABK60415.1| flagellum-specific ATP synthase [Clostridium novyi NT]
          Length = 438

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 172/434 (39%), Positives = 250/434 (57%), Gaps = 19/434 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           +A+    Y++ LV Q   +  +T     +      VC     ++  +N   + +V+    
Sbjct: 14  IAKCDFKYTEGLVKQ---VIGLTIEVEGIKAFVGEVC----TIYNKENEPIMCEVVGFKE 66

Query: 68  DIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           D V + P  +GE I +G    +V       +  S    G+V+N LGKP+  ++ L  G +
Sbjct: 67  DNVILMP--LGELIGIGPGCKVVPSKKYLSVKCSDDLLGKVLNGLGKPLKSEEELPIG-V 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              + +  P  + R+R++    TG+R +D F     GQRIG+FAGSG+GKST L M AR 
Sbjct: 124 DYPLDTAPPDPLKRRRIKDEIATGVRAVDGFLTCGEGQRIGIFAGSGVGKSTTLGMIARE 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+L+GERGREV +FIE  LG+  LKKSV+V ATSD+  ++R     TA  IAE
Sbjct: 184 AKADINVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFTATAIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  KG  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LPRL+ER G S+K 
Sbjct: 244 YFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSDK- 302

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D L SVSRL  +
Sbjct: 303 -GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDILNSVSRLMSE 361

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + + KK  S    L+  ++ + D+  IG Y  G +  +D A+     + D+L+Q   +
Sbjct: 362 IATDEHKKAASLARDLLATYKNSEDLINIGAYVRGSNPKVDMAIQYNDELNDYLRQGIKE 421

Query: 424 LSSEDVFQEITKKL 437
            S    FQE   +L
Sbjct: 422 HSE---FQESVTRL 432


>gi|255261477|ref|ZP_05340819.1| flagellum-specific ATP synthase [Thalassiobium sp. R2A62]
 gi|255103812|gb|EET46486.1| flagellum-specific ATP synthase [Thalassiobium sp. R2A62]
          Length = 461

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 161/405 (39%), Positives = 237/405 (58%), Gaps = 2/405 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G++S I      +T LSQ+   GD +      S    +V++I    +     GI + I +
Sbjct: 23  GHVSEIFQDKIRITGLSQFARTGDILTVGLGESALRAEVVQIGKKDLVAMVDGITDRIQM 82

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
            D V + G  R+ PS  W GR+I+  G P+DG   L  G   + + +  P A  R+ +  
Sbjct: 83  NDSVAYDGVVRLHPSDHWKGRIIDPFGAPMDGK-HLMCGVNPINVRAAPPDASKRRPLGP 141

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
             +TG+   + F P+  GQR+G+FAGSG+GKSTLL M  +    D ++I LVGERGRE+ 
Sbjct: 142 RLETGLAAFNTFLPIVTGQRVGLFAGSGVGKSTLLGMMCQGIQADTIVIGLVGERGRELM 201

Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           EF+ + LG + L +SVVV ATSD++P  R+    TA+ +AEYF  +G NVLL+LDS+TRF
Sbjct: 202 EFVTNVLGQEGLARSVVVAATSDQAPQTRRRCAWTAMAVAEYFRDQGQNVLLLLDSVTRF 261

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + RE+A   GE    RG+P S    +  L ER GP  + KG+ITAV SVLV G +  +
Sbjct: 262 AEAHREVAVAGGEDASLRGFPASTNHMITALCERAGPGPEGKGDITAVFSVLVAGSDMEE 321

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PIAD +R +LDGHIVL+R +AE GR+P +D   SVSR   +A +A++ KL+ +   L+  
Sbjct: 322 PIADMMRGVLDGHIVLDREIAERGRFPAIDLQRSVSRALPEAATAEQNKLLLAARKLLAT 381

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  +  +   G Y  G D  +D ++   P I +FL  S  D++++
Sbjct: 382 YTRSEMMIQAGLYVSGSDPDIDASILAYPEIDNFLTLSGQDITAD 426


>gi|86149592|ref|ZP_01067822.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88597163|ref|ZP_01100398.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|148926360|ref|ZP_01810044.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|218561874|ref|YP_002343653.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|85839860|gb|EAQ57119.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190224|gb|EAQ94198.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359580|emb|CAL34364.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145844752|gb|EDK21857.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|284925487|gb|ADC27839.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928127|gb|EFV07445.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 461

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|94500272|ref|ZP_01306805.1| flagellum-specific ATP synthase [Oceanobacter sp. RED65]
 gi|94427571|gb|EAT12548.1| flagellum-specific ATP synthase [Oceanobacter sp. RED65]
          Length = 469

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 168/425 (39%), Positives = 237/425 (55%), Gaps = 18/425 (4%)

Query: 4   NLETLAQLAE--DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG 60
            L+TL  +AE   +    VV G     +      V C    V +GD   V QG       
Sbjct: 10  KLKTLKWIAERHQFKSQPVVSGRLTRMVGLTLEAVGC---NVKVGDRCHVEQGSEFIE-A 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + D  ++ PV     +S G  V        I       GRVIN  GKP+DG    
Sbjct: 66  QVVGFDEDKFFLMPVEPANSLSPGAKVTPILDSAEIPVGDMLLGRVINGAGKPLDG---- 121

Query: 120 GKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KGDL    ++ +   +   M R  + +    GIR I+    +  GQR+G+FAGSG+GKS
Sbjct: 122 -KGDLVSQNTLNLDGSIINPMQRAPIRQTMDVGIRAINGLLTVGRGQRMGLFAGSGVGKS 180

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFI+D LG+  +K++VVV + +D+SP++R  A
Sbjct: 181 VLLGMMTRFSTADIIVVGLVGERGREVQEFIQDILGEEGMKRAVVVASPADDSPVMRMRA 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              +  IAEYF  +G +VLL++DS+TR+  + REIA   GE P  +GYP SVF+++P+L+
Sbjct: 241 ADLSTAIAEYFRDEGKDVLLLMDSLTRYGQAQREIALAVGEPPATKGYPPSVFAKIPKLV 300

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL R LAEEG+YP +D  
Sbjct: 301 ERAGNGPEGGGSITAFYTVLTEGDDLQDPIADSARAILDGHVVLARRLAEEGQYPAIDIE 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR   +  S    +      HL   + +  D+  +G Y PG +  LD AV   PI+ 
Sbjct: 361 ASISRAMPQIVSKASLQNAQKFKHLYSLYRQNMDLISVGAYSPGNNPELDHAVRLHPIMR 420

Query: 415 DFLKQ 419
            F+ Q
Sbjct: 421 TFIMQ 425


>gi|261855057|ref|YP_003262340.1| flagellar protein export ATPase FliI [Halothiobacillus neapolitanus
           c2]
 gi|261835526|gb|ACX95293.1| flagellar protein export ATPase FliI [Halothiobacillus neapolitanus
           c2]
          Length = 465

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/355 (40%), Positives = 220/355 (61%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
            Y+ P+     I+ G  V + G   R  + P     GRV++A G+P+D   ++  GD+ +
Sbjct: 92  TYLMPLEALRGIAPGCRVQNQGASIRMPLGPE--LLGRVLDARGQPLDDGPAI-FGDIPV 148

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           ++  +    + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R   
Sbjct: 149 DLQGRSNNPLKRRPIREPLDVGVRAINALLTVGRGQRMGIFAGSGVGKSVLLGMMTRYTT 208

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREVREF+ + L D  + +++V+ A +D SP++R      A  IAEYF
Sbjct: 209 AEIIVVGLIGERGREVREFVAEILDDEARSRAIVIAAPADASPLMRLHGASLATAIAEYF 268

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REI    GE P  +GYP SVF+ LP L+ER G  E  +G
Sbjct: 269 REQGHDVLLLMDSLTRYAQAQREIGLAIGEPPATKGYPPSVFARLPALVERAGNGESARG 328

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA  +VLV+GD+ NDPIAD+ R+ILDGHIVL+R++AE GRYP +D  AS+SRL     
Sbjct: 329 SMTAFYTVLVEGDDQNDPIADAARAILDGHIVLSRAIAERGRYPAIDIEASISRLMPALV 388

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           S +   L+     L+  + ++RD+  +G YR G D+ LD+A+   P +  F+ QS
Sbjct: 389 SPEHLDLMQRFKQLMSTYNQSRDLLAVGAYRRGHDVRLDRAIDAQPDLEAFISQS 443


>gi|332305662|ref|YP_004433513.1| flagellar protein export ATPase FliI [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172991|gb|AEE22245.1| flagellar protein export ATPase FliI [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 444

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/423 (39%), Positives = 243/423 (57%), Gaps = 17/423 (4%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           LE +  L +   +  VV  G +  +  +  T+  +   + +G   + Q  + +   +V+ 
Sbjct: 6   LENIKALQQQVPQAPVVAAGKL--VRGIGLTLEAVGCQMPVGSQCLIQTVDGEIEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
               I Y+ P    + I  G  V    R +  P      GRV++  G+P+DG   LG   
Sbjct: 64  FAEHITYLMPTQAVKGIVPGSRVQPLNREQGLPVGMSLLGRVVDGNGQPLDG---LG--- 117

Query: 124 LSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +++   +VP   P MN   R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 118 -AIKAEKRVPLTRPPMNPLSRKPIREPLDVGVRAINSMITVGSGQRMGLFAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ LVGERGREV+EFI+D LGD   +K+VVV A +D SP++R     
Sbjct: 177 LGMMTRGTSADVVVVGLVGERGREVKEFIQDILGDEERQKAVVVAAPADTSPLMRLKGCE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TAVTIAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER
Sbjct: 237 TAVTIAEYFRDKGMNVLLLVDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVER 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   + +G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LA+ G YP +D  AS
Sbjct: 297 AGNGGENQGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRQLADSGHYPAIDIEAS 356

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S +  ++   +  +   +++ RD+  IG Y  G D  +D ++   P I  F
Sbjct: 357 ISRVMPMVVSPEHVQVARRIRQVYSTYQQNRDLISIGAYTRGNDPRIDLSIKAEPAINAF 416

Query: 417 LKQ 419
           L+Q
Sbjct: 417 LQQ 419


>gi|308173586|ref|YP_003920291.1| flagellar-specific ATPase [Bacillus amyloliquefaciens DSM 7]
 gi|307606450|emb|CBI42821.1| flagellar-specific ATPase [Bacillus amyloliquefaciens DSM 7]
 gi|328553482|gb|AEB23974.1| flagellum-specific ATP synthase [Bacillus amyloliquefaciens TA208]
 gi|328911727|gb|AEB63323.1| flagellar-specific ATPase [Bacillus amyloliquefaciens LL3]
          Length = 438

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/361 (44%), Positives = 221/361 (61%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      I+ G +V   G   RI   A   G+V++A G+P+DG  +L
Sbjct: 58  EVVGFQDENILLMPYLEAASIAPGSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGR-AL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 117 PKGLSPVSTEQPPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  II+LVGERGREVREFIE  LG+  LK+S+VVVATSD+  ++R  A  TA
Sbjct: 177 MIAKQTEADLNIIALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G
Sbjct: 237 TAIAEYFRDKGRNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E+  G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 297 ANEQ--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+          K  +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLK
Sbjct: 355 RVMSNISDPAHIKAANKFRDLLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414

Query: 419 Q 419
           Q
Sbjct: 415 Q 415


>gi|580859|emb|CAA39523.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 440

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 153/361 (42%), Positives = 217/361 (60%), Gaps = 6/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      I+ G +V   G   R+       G+VI+A G+P+D  +S 
Sbjct: 61  EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD--ESF 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +    +      P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 119 CRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  +I+LVGERGREVREFIE  LG + LK+S+VVVATSD+  ++R  A  TA
Sbjct: 179 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G
Sbjct: 239 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 299 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 356

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +       +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLK
Sbjct: 357 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 416

Query: 419 Q 419
           Q
Sbjct: 417 Q 417


>gi|223040079|ref|ZP_03610360.1| flagellar protein export ATPase FliI [Campylobacter rectus RM3267]
 gi|222878665|gb|EEF13765.1| flagellar protein export ATPase FliI [Campylobacter rectus RM3267]
          Length = 434

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/434 (38%), Positives = 249/434 (57%), Gaps = 10/434 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLG 60
           NL++L ++L  + S + V   G I  I++    ++ L     +GD V    + K+   L 
Sbjct: 2   NLDSLKSKLGANLSLSSVF--GVIERISATTIEISGLRP--SIGDIVQICAKDKSKSGLA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V  +  +   I P G  E   +GD V+   +  +I       GRV++    P DG  ++
Sbjct: 58  MVTEVRQNTALISPFGFVEGYKIGDFVYQSDQGMKIPVGDALLGRVVDPFMNPKDGKGAI 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +  IM     AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ 
Sbjct: 118 VATEYA-PIMRAPIDAMKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M  ++      +++L+GERGREV EFIE  L  +L  +VV+VATSD+SP++RK     A+
Sbjct: 177 MIVKNSQAPIKVVALIGERGREVPEFIEKNLRGDLSGTVVIVATSDDSPLMRKYGAFCAM 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           ++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G 
Sbjct: 237 SVAEYFKNQGKDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG- 295

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E+ KG+ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R + + G YPP++ L S SR
Sbjct: 296 KEEGKGSITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSREMTDFGIYPPINILNSASR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S + +   + L  L    +E   +  IG Y+ G D  LD A+ +   I  FLKQ
Sbjct: 356 VMSDIASKEHRANAAKLKRLYSLLKENEVLLRIGAYQKGSDKELDLAISKKEFINAFLKQ 415

Query: 420 SPSDLSSEDVFQEI 433
              +  S +  QE+
Sbjct: 416 DAEEGFSFEQTQEL 429


>gi|253988533|ref|YP_003039889.1| type III secretion system ATPase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211637885|emb|CAR66514.1| type iii secretion component protein sctn [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779983|emb|CAQ83144.1| type iii secretion component protein sctn [Photorhabdus
           asymbiotica]
          Length = 441

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/407 (39%), Positives = 237/407 (58%), Gaps = 27/407 (6%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
           T++ L++ +    F  HQ   +  LG++  I+ +   + P G   ++ +GD +       
Sbjct: 57  TLSLLAEVI---GFQQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGDYLL------ 105

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
                   G++++ LG P  G   L +      +    P  M+R+R+E     G+R ID 
Sbjct: 106 --------GQILDGLGNPFSGGQ-LPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDG 156

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
                 GQR+G+FA +G GKSTLLS   R+   D  +++L+GERGREVREFIE  LG+  
Sbjct: 157 LLTCGEGQRMGIFAAAGGGKSTLLSTLIRNAEVDVTVLALIGERGREVREFIESDLGEEG 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK+SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +
Sbjct: 217 LKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 276

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  RGYP SVF+ LPRL+ER G S  +KG+ITA+ +VLV+GD+  +P+AD  RSILD
Sbjct: 277 GEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILD 334

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHI+L+R LA    YP +D L S SR+  +  + + +   + L H + ++EE   +  IG
Sbjct: 335 GHIILSRKLAAANHYPAIDVLRSASRVMSQIITPEHQAQANLLRHWLAKYEEVELLLQIG 394

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDLSSEDV-FQEITKK 436
            Y+ G D + D A+  +  I  +L+Q    PSDL    V  Q+ITK+
Sbjct: 395 EYQKGQDPVADNAIAHIEAIRGWLRQGTHEPSDLPQTLVLLQQITKQ 441


>gi|32266064|ref|NP_860096.1| flagellum-specific ATP synthase [Helicobacter hepaticus ATCC 51449]
 gi|32262113|gb|AAP77162.1| flagellum-specific ATP synthase FliI [Helicobacter hepaticus ATCC
           51449]
          Length = 458

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/381 (41%), Positives = 229/381 (60%), Gaps = 6/381 (1%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPI 113
           + NLG V+ I  +  +I P    E    GD V   + G   I       GRVIN LG+PI
Sbjct: 74  THNLGMVMAIEGEHFFISPFSFIEGHKCGDKVEILNHG-LHIPVGENMLGRVINPLGEPI 132

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D   +L     ++ +M     A+ R  + + F+ G++ ID       GQ++G+FAGSG+G
Sbjct: 133 DDKGALHTSHTTL-LMRPPISALKRGLINEVFEVGVKSIDGILTCGKGQKMGIFAGSGVG 191

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM 233
           KSTL+ M  R       +I+L+GERGREV EFI   L ++L  +++VVATSD+SP++RK 
Sbjct: 192 KSTLMGMIVRGSNAPIKVIALIGERGREVPEFIHKNLNNDLTNTILVVATSDDSPLMRKY 251

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
              +A+ IAEYF S G++VL I+DSITRFA + REI    GE P ++GYP SV + LP+L
Sbjct: 252 GAFSAMAIAEYFKSLGNDVLFIMDSITRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQL 311

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G  E   G+ITA  +VLV+GD+ +DP+AD  RSILDGHIVLNR L + G YPP++ 
Sbjct: 312 MERAG-KEDGVGSITAFFTVLVEGDDLSDPVADQSRSILDGHIVLNRDLTDMGIYPPINI 370

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S SR+ +   S +  +++     L    +E   +  IG Y+ G D  LD+A+ +  ++
Sbjct: 371 LNSASRVINDIISPEHLQVIRKFRRLYSLLKENEVLIRIGAYQRGADKELDEAITKRSLM 430

Query: 414 YDFLKQSPSD-LSSEDVFQEI 433
             FLKQ  ++  S E  FQE+
Sbjct: 431 ESFLKQEMNEQWSFERSFQEL 451


>gi|167574676|ref|ZP_02367550.1| flagellum-specific ATP synthase [Burkholderia oklahomensis C6786]
          Length = 435

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 167/380 (43%), Positives = 232/380 (61%), Gaps = 24/380 (6%)

Query: 61  QVIRINLDIVYICP----VGI--GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID 114
           QV+  N +  Y+ P    VG+  G ++   D     G  R+  +  W GRVIN LG+PID
Sbjct: 57  QVVGFNREESYLMPFKKPVGLVAGAQVLARD---RKGALRVGRA--WLGRVINGLGEPID 111

Query: 115 GDDSLGKGDLSMEIMSKVPPAMN--RQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           G   LG GD   +++++ P A+N  R+R V      G+R I+    L  GQR+G+ AGSG
Sbjct: 112 GHGPLG-GD---QVLNEKPAAVNPLRKRAVRDVLDVGVRAINGALTLGKGQRVGLMAGSG 167

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230
           +GKS LL M  R+   D V++ L+GERGREVREF+E  LGD  L K+V+VVA +DESP++
Sbjct: 168 VGKSVLLGMMTRATAADVVVVGLIGERGREVREFVEHALGDEGLAKAVLVVAPADESPLM 227

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R  A      IA ++   G +VLL++DS+TR+A + REIA + GE P  RGYP SVF  L
Sbjct: 228 RLRAAELCHAIAAHYRDAGSDVLLLVDSLTRYAMAQREIALSLGEPPATRGYPPSVFGML 287

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P+L+E  G  E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL+R LAE G YP 
Sbjct: 288 PQLVETAGNGEG-SGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLSRELAERGHYPA 346

Query: 351 VDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           +D   SVSR    A  AD + +V +  L  +I R E+ RD+  +GGY  G D   D+AV 
Sbjct: 347 IDVTRSVSRC--MAQIADARHVVRAGQLKEMIGRHEQVRDLIPLGGYVQGADAATDRAVA 404

Query: 409 QVPIIYDFLKQSPSDLSSED 428
               I  FL+Q   + +S D
Sbjct: 405 MAERIDAFLRQPMHEAASFD 424


>gi|291538498|emb|CBL11609.1| type III secretion system ATPase, FliI/YscN [Roseburia intestinalis
           XB6B4]
          Length = 435

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/374 (40%), Positives = 236/374 (63%), Gaps = 6/374 (1%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
            ++ + +N   + +V+      + + P    E I +G +V + G    +       G  +
Sbjct: 45  IIIDREQNISTMAEVVGFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTL 104

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           + +G+P D ++ L   D  +E +   P  M R+ +++    G++ +D    +  GQRIG+
Sbjct: 105 DGIGRPTDVEELLLPYDYPVEALP--PDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGI 162

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           FAGSG+GKSTLL MFAR+   D  +I+L+GERGREVREF+E  LG+  +K+SVV+VATSD
Sbjct: 163 FAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSD 222

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +  ++R  A  TA  IAEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP S
Sbjct: 223 KPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPS 282

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           V+SE+P+LLER G S  +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++
Sbjct: 283 VYSEMPKLLERAGTS--DKGSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQK 340

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
             YP +D L S+SR+     +++ K+L   L +++  + E  D+  IG Y+ G +  +D 
Sbjct: 341 NHYPAIDVLQSISRVMSSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDY 400

Query: 406 AVHQVPIIYDFLKQ 419
           A+ ++  + +FL Q
Sbjct: 401 AIQKIQAVNEFLMQ 414


>gi|257457883|ref|ZP_05623042.1| flagellar protein export ATPase FliI [Treponema vincentii ATCC
           35580]
 gi|257444596|gb|EEV19680.1| flagellar protein export ATPase FliI [Treponema vincentii ATCC
           35580]
          Length = 479

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/326 (46%), Positives = 207/326 (63%), Gaps = 4/326 (1%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           +   GRV+++LG+  DG        L   I+++ P  + R+ +++   TGIR ID    +
Sbjct: 98  SVLLGRVVDSLGRAADGKQE-PYSPLHYPILAQPPDPLERRPIKERIVTGIRAIDALLAV 156

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217
             GQRIG+FAGSGIGKSTL+ M AR+   D  +I+L+GERGREV +F+E  LG + LK S
Sbjct: 157 GRGQRIGIFAGSGIGKSTLMGMIARNTSADVNVIALIGERGREVNDFLEHDLGPEGLKHS 216

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV ATSD SP+ R     TA  IAEYF  +G +V+L+ DS+TRFA + REI+   GE P
Sbjct: 217 VVVTATSDTSPLARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAKAQREISLAIGEPP 276

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             RGY  SVF  LP+LLER G S K  G+IT   +VLVDGD+ ++PI+D+VR ILDGHIV
Sbjct: 277 ATRGYTPSVFEVLPKLLERSGTSAK--GSITGFYTVLVDGDDMDEPISDAVRGILDGHIV 334

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           LNR LA+ G YP +D L S+SRLA++      KK    +  L+  + +  D+  +G Y+ 
Sbjct: 335 LNRKLAQCGHYPAIDVLGSISRLANRVAGECSKKAAQYMRKLMAVYADAEDMIQVGAYQK 394

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423
           G +  +D+A+     I  FL+Q  +D
Sbjct: 395 GSNPAIDEAIDHHDKIETFLQQEVND 420


>gi|27550061|gb|AAO18044.1| LscN [Photorhabdus luminescens]
          Length = 440

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 162/406 (39%), Positives = 239/406 (58%), Gaps = 27/406 (6%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
           T++ L++ +    F  HQ   +  LG++  I+ +   + P G   ++ +GD +       
Sbjct: 57  TLSLLAEVI---GFQQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGDYLL------ 105

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
                   G+V++ LG P  G   L +      +    P  M+R+R+E     G+R ID 
Sbjct: 106 --------GQVLDGLGNPFAGGQ-LPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDG 156

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
                 GQR+G+FA +G GKSTLLS   RS   D  +++L+GERGREVREFIE  LG+  
Sbjct: 157 LLTCGEGQRMGIFAAAGGGKSTLLSTLIRSAEVDVTVLALIGERGREVREFIESDLGEEG 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK+SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +
Sbjct: 217 LKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 276

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  RGYP SVF+ LPRL+ER G S  +KG+ITA+ +VLV+GD+  +P+AD  RSILD
Sbjct: 277 GEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILD 334

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHI+L+R LA    YP +D L S SR+ ++  + + +     L + + ++EE   +  IG
Sbjct: 335 GHIILSRKLAAANHYPAIDVLRSASRVMNQIITPEHQAQAGLLRNWLAKYEEVELLLQIG 394

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL-SSEDVFQEITK 435
            Y+ G DL+ D A+ ++  I  +L+Q    PSDL  +  + Q+IT+
Sbjct: 395 EYQKGQDLVADNAIARIDAIRSWLRQGTHEPSDLPQTLALLQQITR 440


>gi|15615018|ref|NP_243321.1| flagellum-specific ATP synthase [Bacillus halodurans C-125]
 gi|10175075|dbj|BAB06174.1| flagellar-specific ATP synthase [Bacillus halodurans C-125]
          Length = 437

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 151/380 (39%), Positives = 239/380 (62%), Gaps = 6/380 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           + +V+    + V + P+    EI+ G LV   GR  ++       G VI+  G+P+ G+ 
Sbjct: 55  MAEVVGFKEERVLLMPLNGTAEIAPGSLVEGTGRPLQVKVGYSLIGHVIDGCGRPLTGE- 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L  G       +  P  ++R R+++    G+R ID    +  GQR+G+FAGSG+GKSTL
Sbjct: 114 ALPNGLTPYPTDNPPPNPISRPRIKEAMHLGVRAIDGLLTVGKGQRVGIFAGSGVGKSTL 173

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L+M A++   D  II+L+GERGREV++FIE  LG D L++S++VVATSD+  ++R    +
Sbjct: 174 LAMLAKNAAADLNIIALIGERGREVKDFIERDLGEDGLRRSIIVVATSDQPALMRIKGAM 233

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  +AEYF  +G +V L++DS+TRFA + REI    GE P  +GY  SVF+ LP+LLER
Sbjct: 234 TATALAEYFRDQGLHVNLMMDSVTRFAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLER 293

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G + K  G+IT   +VLVDGD+ N+PI+D+VR ILDGH VL+R LA +G YP ++ L S
Sbjct: 294 AGTNGK--GSITGFYTVLVDGDDLNEPISDTVRGILDGHFVLDRELANKGHYPAINILKS 351

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+ +   + ++K+    +  L+  ++E+ D+  IG Y+ G    +D+A+ + P +  F
Sbjct: 352 VSRVMNDIVTDEQKRAAEHVRSLLSVYKESEDLINIGAYKRGSSKQIDEAIERQPEVISF 411

Query: 417 LKQSPSDLS-SEDVFQEITK 435
           L+Q+  +++ +E   Q++ +
Sbjct: 412 LRQNTDEVAIAEHSIQQLIQ 431


>gi|154686040|ref|YP_001421201.1| flagellum-specific ATP synthase [Bacillus amyloliquefaciens FZB42]
 gi|154351891|gb|ABS73970.1| FliI [Bacillus amyloliquefaciens FZB42]
          Length = 438

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 158/361 (43%), Positives = 221/361 (61%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      I+ G +V   G   RI   A   G+V++A G+P+DG  +L
Sbjct: 58  EVVGFQDENILLMPYLEAASIAPGSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGR-AL 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 117 PKGLSPVSTEQPPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  II+LVGERGREVREFIE  LG+  LK+S+VVVATSD+  ++R  A  TA
Sbjct: 177 MIAKQTEADLNIIALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G
Sbjct: 237 TAIAEYFRDKGRNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E+  G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 297 ANEQ--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+          +  +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLK
Sbjct: 355 RVMSNISDTSHIEAANKFRDLLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414

Query: 419 Q 419
           Q
Sbjct: 415 Q 415


>gi|224438105|ref|ZP_03659040.1| flagellum-specific ATP synthase [Helicobacter cinaedi CCUG 18818]
 gi|313144545|ref|ZP_07806738.1| flagellum-specific ATP synthase FliI [Helicobacter cinaedi CCUG
           18818]
 gi|313129576|gb|EFR47193.1| flagellum-specific ATP synthase FliI [Helicobacter cinaedi CCUG
           18818]
          Length = 472

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 158/370 (42%), Positives = 222/370 (60%), Gaps = 5/370 (1%)

Query: 52  QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINAL 109
           QG+   +LG VI I  +  +I P    E    GD V   + G   I       GRV+N L
Sbjct: 85  QGEKKQSLGMVIAIEGEKFFISPFSFVEGHKCGDKVEILNHG-LNIPVGEAMLGRVVNPL 143

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+PID   SL     +  +M     A+ R  +++ F+ G++ ID       GQ++G+FAG
Sbjct: 144 GEPIDDKGSL-HTQATTPLMRSPLSALKRGLIDEVFEVGVKSIDSILTCGKGQKMGIFAG 202

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPI 229
           SG+GKSTL+ M  R       +I+L+GERGREV EFI   L ++L  +++VVATSD+SP+
Sbjct: 203 SGVGKSTLMGMIVRGAKAPIKVIALIGERGREVPEFIYKNLNNDLTNTILVVATSDDSPL 262

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           +RK    +A+ IAEYF S G++VL I+DS+TRFA + REI    GE P ++GYP SV + 
Sbjct: 263 MRKYGAFSAMAIAEYFKSLGNDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTL 322

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP+L+ER G  E   G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVLNR L + G YP
Sbjct: 323 LPQLMERAG-KEDSVGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLNRDLTDMGIYP 381

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           P++ L S SR+ +   S +    V     L    +E   +  IG Y+ G D+ LD+A+++
Sbjct: 382 PINILNSASRIINDIISPEHLGYVRKFRRLYSLIKENEVLIRIGAYQRGADIELDEAINK 441

Query: 410 VPIIYDFLKQ 419
              +  FLKQ
Sbjct: 442 RTAMEAFLKQ 451


>gi|269792943|ref|YP_003317847.1| ATPase, FliI/YscN family [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100578|gb|ACZ19565.1| ATPase, FliI/YscN family [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 441

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/399 (41%), Positives = 239/399 (59%), Gaps = 10/399 (2%)

Query: 43  VCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSA 99
           V +GD      +N  N    +V+    D V + P+G   +I  G D+        +    
Sbjct: 41  VQVGDLCEISFRNRRNPLKAEVVGFRSDRVLLMPLGDLNDIGPGCDVAALGPTLGVHVGE 100

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G  +    + +  P  + RQ +++    G+RVID    L 
Sbjct: 101 DLLGRILDGLGNPIDDLGPVGASEF-YPLYAPPPHPLKRQMIDRPLSVGVRVIDGLLTLG 159

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR+   D  +I+LVGERGREVREF+E  LG + LK+SV
Sbjct: 160 QGQRVGIFAGSGVGKSVLLGMMARNTEADVNVIALVGERGREVREFVERDLGPEGLKRSV 219

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVATSD+ P++R  A LTA  +AEYF  +G NVLL++DS+TR A + R++    GE P 
Sbjct: 220 VVVATSDQPPLVRLKASLTATAVAEYFRDQGANVLLMMDSVTRVAMAQRDVGLAIGEPPA 279

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GY  SVF+ LPRLLER G    ++G+ITA+ +VLV+GD+ N+P+AD+VR ILDGHIVL
Sbjct: 280 TKGYTPSVFAFLPRLLERSGAG--DRGSITAIYTVLVEGDDMNEPVADTVRGILDGHIVL 337

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLA +  YP V+   SVSR+     S +  +    +  L+  +EE +D+  IG Y+ G
Sbjct: 338 SRSLAAKNHYPSVEVGRSVSRVMPHIVSREHLESAGRVRELLAVYEEAQDLVNIGAYKAG 397

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  +D A+  +  + +FL+Q   + SS   F E   +L
Sbjct: 398 SNPRIDWALANLEDVRNFLRQGMHERSS---FDETVSRL 433


>gi|302392393|ref|YP_003828213.1| type III secretion system ATPase, FliI/YscN [Acetohalobium
           arabaticum DSM 5501]
 gi|302204470|gb|ADL13148.1| type III secretion system ATPase, FliI/YscN [Acetohalobium
           arabaticum DSM 5501]
          Length = 439

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/333 (45%), Positives = 209/333 (62%), Gaps = 5/333 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V++ LG P+  D  L +      + +  P  + RQR+ +    GIR ID       GQ
Sbjct: 105 GHVLDGLGNPLT-DLDLDQLHKEYSVNNPPPNPLVRQRITEPLSVGIRSIDGLLTCGRGQ 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKSTLL M AR+   D  +I L+GERGREVREFIED LG + LK+SVVVV
Sbjct: 164 RLGIFAGSGVGKSTLLGMIARNTAADVNVIGLIGERGREVREFIEDDLGTEGLKRSVVVV 223

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R    L   TIAEYF  +G +V+L++DSITRFA + RE+    GE P  RG
Sbjct: 224 ATSDQPALVRLKGALVTTTIAEYFRDQGQDVMLMMDSITRFARAQREVGLAVGEPPATRG 283

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF+ LP+LLER G    E G IT + +VLV+GD+ N+PIAD+VR I+DGHI L+R 
Sbjct: 284 YTPSVFAMLPKLLERAG--NNEVGTITGLYNVLVEGDDMNEPIADAVRGIVDGHITLSRD 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA +  YP VD L SVSR+ D   + + +     L  ++  +EE++D+  IG Y  G + 
Sbjct: 342 LATQNHYPAVDVLESVSRVMDDVVTEEHQTAAQQLREVLATYEESKDLVNIGAYEEGNNP 401

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
            LD A+ ++  + DFL+Q   + S  E   Q++
Sbjct: 402 ELDYALSKLDEVNDFLQQGVEEKSDFETTLQQL 434


>gi|301646800|ref|ZP_07246653.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
 gi|307136847|ref|ZP_07496203.1| FliI/YscN family ATPase [Escherichia coli H736]
 gi|307315208|ref|ZP_07594787.1| flagellar protein export ATPase FliI [Escherichia coli W]
 gi|331640702|ref|ZP_08341849.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331666535|ref|ZP_08367409.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
 gi|301075006|gb|EFK89812.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
 gi|306905389|gb|EFN35926.1| flagellar protein export ATPase FliI [Escherichia coli W]
 gi|315059477|gb|ADT73804.1| flagellum-specific ATP synthase [Escherichia coli W]
 gi|315616838|gb|EFU97455.1| flagellum-specific ATP synthase [Escherichia coli 3431]
 gi|323379965|gb|ADX52233.1| ATPase, FliI/YscN family [Escherichia coli KO11]
 gi|331040076|gb|EGI12284.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331065759|gb|EGI37643.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
          Length = 445

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|320535384|ref|ZP_08035498.1| flagellar protein export ATPase FliI [Treponema phagedenis F0421]
 gi|320147786|gb|EFW39288.1| flagellar protein export ATPase FliI [Treponema phagedenis F0421]
          Length = 478

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/384 (42%), Positives = 227/384 (59%), Gaps = 7/384 (1%)

Query: 44  CLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-C 100
            +G+    +  NS +  + +V+ ++   V +      + I LG  V   G     P    
Sbjct: 40  VVGELCKIKANNSSDPIMAEVVGLDEGTVKLMSYSDLQGIELGSEVIAEGEILSVPVGDA 99

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVINALGK IDG   +        ++   P  M+R+ + +   TG+R ID    +  
Sbjct: 100 LLGRVINALGKAIDGKQEVYSSK-RYPVLQTPPNPMDRKPIRQRIVTGVRAIDSLLAVGC 158

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+F+GSG+GKSTL+ M AR+   D  +I+L+GERGREV +FIE  LG + LKKSVV
Sbjct: 159 GQRLGIFSGSGVGKSTLMGMIARNTNADVNVIALIGERGREVMDFIEHDLGPEGLKKSVV 218

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSDESP+ R     TA  IAEYF  +G +V+L+ DS+TRFA + REI   +GE    
Sbjct: 219 VTATSDESPLARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAKAQREIGLAAGEPAAT 278

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGY  SVF  LP+LLER G S   KG+IT   +VLVDGD+ ++PI+D+VR I+DGHIVL+
Sbjct: 279 RGYTPSVFETLPKLLERSGTS--SKGSITGFYTVLVDGDDLDEPISDAVRGIIDGHIVLS 336

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA+   YP +D L S+SRLA +       + V ++   I  +EE+ D+  +G Y+ G 
Sbjct: 337 RKLAQRSHYPAIDILNSISRLAHRVSGRFTNQAVLAMRKSIAIYEESADMIQVGAYQKGS 396

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423
              +DKA+     I +FL Q  +D
Sbjct: 397 SEEVDKAIALHQPIEEFLMQEVTD 420


>gi|59889770|emb|CAH19125.1| Lateral flagellar export/assembly protein (LfiI-like) [Escherichia
           coli]
 gi|284920034|emb|CBG33090.1| lateral flagellar specific ATP synthase (FliI-like) [Escherichia
           coli 042]
          Length = 445

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-SGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|323181535|gb|EFZ66955.1| flagellum-specific ATP synthase [Escherichia coli 1357]
          Length = 445

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|291613065|ref|YP_003523222.1| flagellar protein export ATPase FliI [Sideroxydans lithotrophicus
           ES-1]
 gi|291583177|gb|ADE10835.1| flagellar protein export ATPase FliI [Sideroxydans lithotrophicus
           ES-1]
          Length = 498

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/319 (44%), Positives = 201/319 (63%), Gaps = 2/319 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+D    L +   S  + S+    + R  +++    G+R I+    +  G
Sbjct: 158 LGRVLDGAGRPLDQFGPLLESK-SAPLQSRPINPLERAAIKEALDVGVRAINSLLTVGRG 216

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFI D LG + L++SVVV
Sbjct: 217 QRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFITDILGQEGLRRSVVV 276

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  +
Sbjct: 277 AAPADTSPLMRLQGAAYATTIAEYFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATK 336

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP+L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 337 GYPPSVFAKLPQLVERAGNGAEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 396

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE+G YP +D  AS+SR  +   S      V    H+   ++   D+  +G Y  G D
Sbjct: 397 RLAEQGHYPAIDIEASISRAMNHLVSPQHFLQVQRFKHMYAHYQRNHDLISVGAYVKGSD 456

Query: 401 LILDKAVHQVPIIYDFLKQ 419
            +LD+A+   P +  FLKQ
Sbjct: 457 PLLDQAIQLYPHMEHFLKQ 475


>gi|170021371|ref|YP_001726325.1| FliI/YscN family ATPase [Escherichia coli ATCC 8739]
 gi|188494378|ref|ZP_03001648.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           53638]
 gi|256020217|ref|ZP_05434082.1| FliI/YscN family ATPase [Shigella sp. D9]
 gi|300817283|ref|ZP_07097501.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|300936113|ref|ZP_07151053.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
 gi|332281379|ref|ZP_08393792.1| lateral flagellar export/assembly protein [Shigella sp. D9]
 gi|169756299|gb|ACA78998.1| ATPase, FliI/YscN family [Escherichia coli ATCC 8739]
 gi|188489577|gb|EDU64680.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           53638]
 gi|300458733|gb|EFK22226.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
 gi|300530259|gb|EFK51321.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|323171050|gb|EFZ56699.1| flagellum-specific ATP synthase [Escherichia coli LT-68]
 gi|332103731|gb|EGJ07077.1| lateral flagellar export/assembly protein [Shigella sp. D9]
          Length = 445

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|288942633|ref|YP_003444873.1| flagellar protein export ATPase FliI [Allochromatium vinosum DSM
           180]
 gi|288898005|gb|ADC63841.1| flagellar protein export ATPase FliI [Allochromatium vinosum DSM
           180]
          Length = 461

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/394 (39%), Positives = 229/394 (58%), Gaps = 6/394 (1%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G   +H    +    +V+    +  ++ P G  E ++ G  +    + R  P      GR
Sbjct: 62  GRAAIHTANGTRLGAEVVGFQGERTFLMPEGKLEGLAPGARIEPLEQARRIPVGPALLGR 121

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALGKP+DG   +   +++      + P + R  V +    GIR ++    +  GQRI
Sbjct: 122 VVDALGKPLDGGGPIRTAEMAPIEGRPINP-LGRVPVTEPLDVGIRALNGLLSVGRGQRI 180

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT- 223
           G+FAGSG+GKS LL M  R    D +++ L+GERGREV EFI D L +  +K  VVVA  
Sbjct: 181 GLFAGSGVGKSVLLGMMTRHTAADVIVVGLIGERGREVNEFIYDILDEESRKRTVVVAVP 240

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +D+SP+LR+     + TIAE F  +G NVLL++DS+TRFA   REIA   GE P  +GY 
Sbjct: 241 ADQSPLLRQHGAWVSTTIAESFRDRGLNVLLLMDSLTRFAQGAREIAMAIGEPPATKGYS 300

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SVF+ LP+L+ER G  +K  G+ITA  +VL +GD+ NDPI DS R+ILDGH+VL+R +A
Sbjct: 301 ASVFARLPQLVERAGNGDKGGGSITAFYTVLAEGDDQNDPIVDSARAILDGHVVLSREIA 360

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E GRYP +D  ASVSR+     + + +K      +L+  +   RD+  +G YR G D  L
Sbjct: 361 ETGRYPAIDVGASVSRVMSAVVTPEHQKAAYRFRNLMSTYARNRDLIAVGAYRKGSDPQL 420

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           D+AV   P +  +L Q+  + +S   F++  ++L
Sbjct: 421 DEAVAMNPRLEAYLGQNRLEKAS---FEDSRRQL 451


>gi|218778525|ref|YP_002429843.1| ATPase FliI/YscN [Desulfatibacillum alkenivorans AK-01]
 gi|218759909|gb|ACL02375.1| ATPase FliI/YscN [Desulfatibacillum alkenivorans AK-01]
          Length = 442

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 238/395 (60%), Gaps = 9/395 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CW 101
           VC  D V  QG+      +V+      + + P G  + I LG  +    +  ++P    +
Sbjct: 42  VC--DLVTTQGRRIP--AEVVGFKEKRMLLMPYGEMQGIQLGCRIVPRQQQPLAPVGDAY 97

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRVI+ LG+P+D    +   D+   + + V  A++R+ V +    G+RVI+ F  +  G
Sbjct: 98  LGRVIDGLGQPMDDKGPIAATDM-YPLYADVVNALHRRSVNQVSDVGVRVINSFITVGQG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+ + AGSG+GKS L+ M +R    D  I++L+GERGREV++F+++ LG D + +S+VV
Sbjct: 157 QRVAIMAGSGVGKSVLMGMISRHMASDVCIVALIGERGREVKDFVDEILGPDGMGRSIVV 216

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            ATSD SP++R      A T+AEYF  +G NV+L++DS+TRFA S R++   +GE P  +
Sbjct: 217 AATSDTSPLVRMRGAYLATTLAEYFRDQGKNVILMMDSVTRFAMSSRDVGLAAGEPPTVK 276

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  S F +LP+LLER G S + KG+IT + +VLV+GD+ NDP+ D+VRSI+DGHIVL+R
Sbjct: 277 GYTPSFFVKLPKLLERAG-SVQGKGSITGIYTVLVEGDDMNDPVGDAVRSIVDGHIVLSR 335

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LA +G YP VD LASVSR+     S +  ++      ++  ++   D+  IG Y  G D
Sbjct: 336 KLANQGHYPAVDVLASVSRVMRATVSGEHTRMAQRFREVLAAYQNVEDLISIGAYVDGSD 395

Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
             +D A   +  +  FL+Q   + +S E+  Q++T
Sbjct: 396 PDVDYAKSMIGKMKQFLRQDMMEGVSYEECVQQLT 430


>gi|86151231|ref|ZP_01069446.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|121613240|ref|YP_999914.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|157414504|ref|YP_001481760.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|167004874|ref|ZP_02270632.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315123794|ref|YP_004065798.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841578|gb|EAQ58825.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|87250392|gb|EAQ73350.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|157385468|gb|ABV51783.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747146|gb|ADN90416.1| Flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315017516|gb|ADT65609.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 461

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 239/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|323191525|gb|EFZ76786.1| flagellum-specific ATP synthase [Escherichia coli RN587/1]
          Length = 446

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-SGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   ++      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSPEHQQSARAMKQHYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMHEPASLELVQ 430


>gi|315932002|gb|EFV10955.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 461

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 239/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|83589626|ref|YP_429635.1| ATPase FliI/YscN [Moorella thermoacetica ATCC 39073]
 gi|83572540|gb|ABC19092.1| type III secretion system ATPase, FliI/YscN [Moorella thermoacetica
           ATCC 39073]
          Length = 436

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/401 (39%), Positives = 240/401 (59%), Gaps = 9/401 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +GG ++ +T +  T+        +G+   ++   +   + +V+    ++  + P+G  E 
Sbjct: 22  RGGKVTRVTGL--TIEARGLKAAIGELCRIYNNGSGPIVAEVVGFREEVTLLMPLGELEG 79

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G  V   GR   I       GRV++ LG+ +DG   L  GD    + ++ P  ++R+
Sbjct: 80  IGPGCRVIATGRGHYIRVGEELLGRVLDGLGRSLDGT-VLVSGD-PQPVNNRPPNPLSRR 137

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+++   TG++ ID       GQR+G+FAGSG+GKSTLL M AR    D  +I+L+GERG
Sbjct: 138 RIKEVLATGVKAIDALLTCGCGQRVGIFAGSGVGKSTLLGMIARHSTADINVIALIGERG 197

Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVR+FIE  LG + L +S+VV ATSD+  ++R     TA  IAEYF  +G NVLL++DS
Sbjct: 198 REVRDFIEGDLGPEGLARSIVVAATSDQPALVRIKGAFTATAIAEYFRDQGKNVLLMMDS 257

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+    GE P  RGY  SVF+ LP+L+ER G    E+G+IT + +VLV+GD
Sbjct: 258 LTRFAIAQREVGLAIGEPPTTRGYTPSVFASLPKLVERAG--NGERGSITGLYTVLVEGD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD+VR +LDGHIVL+R LA    YP +D L S+SRL  +  S ++++    L  
Sbjct: 316 DMNEPVADTVRGLLDGHIVLSRRLAAANHYPAIDVLQSISRLMPEITSREQQEQAGKLRD 375

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L+  ++E  D+  IG Y+ G +  +D A+     I  FL+Q
Sbjct: 376 LLAAYQEAADLIEIGAYQAGSNPRVDAALKYHEAIQSFLRQ 416


>gi|116696307|ref|YP_841883.1| flagellum-specific ATP synthase [Ralstonia eutropha H16]
 gi|113530806|emb|CAJ97153.1| Flagellum-specific ATP synthase [Ralstonia eutropha H16]
          Length = 491

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/333 (45%), Positives = 208/333 (62%), Gaps = 8/333 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAMNRQRVEKGFKT 147
           G  R+   A   GRV++A G+P+DG   LG    +ME+     ++ P M R  +E    T
Sbjct: 133 GSKRLPVGAGLLGRVLDAAGRPLDG---LGPITAAMEVPLAGEQINPLM-RAPIETVLDT 188

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE
Sbjct: 189 GVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIE 248

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           + LG +   +SVVV A +D SP+LR      A  +AEYF  +G +VLLI+DS+TR+A + 
Sbjct: 249 NILGPEGRARSVVVAAPADTSPLLRMQGAAYATRLAEYFRDQGQHVLLIMDSLTRYAMAQ 308

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA   GE P  +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIAD
Sbjct: 309 REIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDPIAD 368

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           S R+ILDGHIVL+RSLAE G YP +D  AS+SR        ++   V     L+ R++  
Sbjct: 369 SARAILDGHIVLSRSLAESGHYPAIDVEASISRAMTALIPDEQFGSVRRFKQLMSRYQRN 428

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           RD+  +G Y PG D  LD A+   P +  FL+Q
Sbjct: 429 RDLISVGAYVPGNDPELDLAMRLHPRMEAFLQQ 461


>gi|170026119|ref|YP_001722624.1| type III secretion system ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|169752653|gb|ACA70171.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII]
          Length = 445

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/363 (43%), Positives = 218/363 (60%), Gaps = 6/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           L +V+ I  ++  + P    + +  G  V   G   R+   A   GR+++ LG PIDG  
Sbjct: 62  LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G    E+    P  + RQ VE+   TG R ID       GQRIG+FA +G+GKSTL
Sbjct: 122 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGGRAIDGILSCGEGQRIGIFAAAGVGKSTL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           LSM       D ++++L+GERGREVREF+E  L    + ++VVVVATSD   + R     
Sbjct: 180 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE P A  +P SVF+ LPRLLER
Sbjct: 240 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S++  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  AS
Sbjct: 300 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 357

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  +  SA +  +   L  ++  ++E   +  IG Y+ G DL  D+A+ + P I  F
Sbjct: 358 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 417

Query: 417 LKQ 419
           L+Q
Sbjct: 418 LQQ 420


>gi|310641546|ref|YP_003946304.1| flagellar protein export atpase flii [Paenibacillus polymyxa SC2]
 gi|309246496|gb|ADO56063.1| Flagellar protein export ATPase FliI [Paenibacillus polymyxa SC2]
          Length = 439

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/387 (40%), Positives = 241/387 (62%), Gaps = 8/387 (2%)

Query: 50  VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVIN 107
           ++ GK +  L  +V+    + V + P+G  + I  G D+V       +   +   G+V++
Sbjct: 48  IYPGKAAKPLQAEVVGFRDNKVLLMPLGELQSIGPGCDVVGTGKPLNVQVGSELLGKVLD 107

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
            LG+P+DG  SL    ++      +P   +NR RV++    G+R ID    +  GQR+G+
Sbjct: 108 GLGQPLDG--SLIPSRMARYSTFNIPSNPLNRPRVQEPISIGVRAIDGLLTIGKGQRVGI 165

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225
           FAGSG+GKSTL+ M AR+   D  +I+L+GERGREV +FIE  LG + L++SVV+VATSD
Sbjct: 166 FAGSGVGKSTLMGMIARNTEADVNVIALIGERGREVLDFIERDLGPEGLERSVVIVATSD 225

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +  ++R    L A TIAEYF  +G NV+L++DS+TR+A + RE+    GE P  RGY  S
Sbjct: 226 QPALIRIKGALIATTIAEYFRDRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPS 285

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF+ LP+LLER G      G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A +
Sbjct: 286 VFASLPKLLERAGTGPT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANK 343

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G +P +D LAS+SR+     + D+     ++  L+  ++++ D+  IG Y+ G +  +D+
Sbjct: 344 GHFPAIDVLASISRVMKDIATRDQIDAAENIKRLMAIYKDSEDLINIGAYQQGSNAEIDE 403

Query: 406 AVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           ++ ++  I+DF +Q   + +  D  +E
Sbjct: 404 SMERIRDIWDFTRQRTDEKAELDEVRE 430


>gi|304404247|ref|ZP_07385909.1| ATPase, FliI/YscN family [Paenibacillus curdlanolyticus YK9]
 gi|304347225|gb|EFM13057.1| ATPase, FliI/YscN family [Paenibacillus curdlanolyticus YK9]
          Length = 441

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/380 (41%), Positives = 237/380 (62%), Gaps = 10/380 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V + P+G  E I  G D+V       +   +   G+V++ LG+P+DG  S 
Sbjct: 62  EVVGFKDNKVILMPLGELESIGPGCDVVGTGKPLTVQVGSELLGKVLDGLGQPLDG--SF 119

Query: 120 GKGDLSMEIMSKVP--PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               +     + VP  P M R RV++    G+R ID    +  GQR+G+FAGSG+GKSTL
Sbjct: 120 IPSRMPHSSTNNVPNNPLM-RPRVKQPLGIGVRAIDGLLTVGQGQRVGIFAGSGVGKSTL 178

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREV EFIE  LG + L +SVV+VATSD+  ++R    L
Sbjct: 179 LGMIARNTSADVNVIALIGERGREVLEFIEKDLGPEGLARSVVIVATSDQPALIRMKGAL 238

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A TIAEYF  +G NV+L++DS+TR+A ++RE+    GE P  RGY  SVF+ LP+LLER
Sbjct: 239 IATTIAEYFRDRGLNVMLMMDSVTRYAMALREVGLAIGEPPATRGYTPSVFAALPKLLER 298

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G      G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +G +P +D LAS
Sbjct: 299 AGTGPT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLSRDLAHQGHFPAIDVLAS 356

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +  + +++   +SL  L+  ++ + D+  IG Y+ G +  +D+A+  +  I  +
Sbjct: 357 ISRVMKEIVTDEQQDAANSLKGLLATYKSSEDLINIGAYQYGSNAKIDQAIEAIDEIRAY 416

Query: 417 LKQSPSD-LSSEDVFQEITK 435
            +Q  ++ +  ED  Q++ +
Sbjct: 417 TRQKTNEKVILEDAQQQLIQ 436


>gi|255523701|ref|ZP_05390667.1| ATPase FliI/YscN [Clostridium carboxidivorans P7]
 gi|296186704|ref|ZP_06855106.1| flagellar protein export ATPase FliI [Clostridium carboxidivorans
           P7]
 gi|255512570|gb|EET88844.1| ATPase FliI/YscN [Clostridium carboxidivorans P7]
 gi|296048741|gb|EFG88173.1| flagellar protein export ATPase FliI [Clostridium carboxidivorans
           P7]
          Length = 435

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/339 (45%), Positives = 220/339 (64%), Gaps = 15/339 (4%)

Query: 103 GRVINALGKPIDGDD-SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           G+V++ LG+P++G++  +G       + ++ P  + R+R+++   TGIR ID FT    G
Sbjct: 102 GKVLDGLGQPLNGEEIDIGT---VYPLDTEPPDPLKRRRIKEVIPTGIRAIDGFTTCGEG 158

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           QRIG+FAGSG+GKST L M AR    D  +I+L+GERGREV++FIE  LG+  +KKS++V
Sbjct: 159 QRIGIFAGSGVGKSTTLGMIARYAEADVNVIALIGERGREVKDFIEKDLGEEGMKKSIIV 218

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            ATSD+  ++R     TA  IAEYF  +G+ V+L++DS+TRFA + REI    GE P  +
Sbjct: 219 CATSDKPALVRLKGAFTATAIAEYFRDRGNKVILMMDSVTRFAMAQREIGLAIGEPPATK 278

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  SVF+ LPRL+ER G S+K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R
Sbjct: 279 GYTPSVFAMLPRLMERAGMSDK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LA +  YP +D L+S+SRL  +    + KK  S    L+  ++ + D+  IG Y  G +
Sbjct: 337 ALAAKNHYPAIDILSSISRLMSEVAEDEHKKAASFARDLLATYKNSEDLINIGAYVKGSN 396

Query: 401 LILDKAVHQVPIIYDFLKQ--------SPSDLSSEDVFQ 431
             +D ++     I  +LKQ        S S LS E++FQ
Sbjct: 397 EKVDTSIQYYDDIIGYLKQGMKEHTTFSESVLSLENIFQ 435


>gi|15639393|ref|NP_218842.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025635|ref|YP_001933407.1| flagellum-specific ATP synthase [Treponema pallidum subsp. pallidum
           SS14]
 gi|6016024|sp|O83417|FLII_TREPA RecName: Full=Flagellum-specific ATP synthase
 gi|3322685|gb|AAC65390.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018210|gb|ACD70828.1| flagellum-specific ATP synthase [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059792|gb|ADD72527.1| flagellar protein export ATPase FliI [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 447

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 4/325 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+NA GK IDG   +    L  E++      M R  + +   TG+RV+D    + 
Sbjct: 100 ALLGRVLNAFGKAIDGKGEI-YAPLRSEVLRASSNPMERLPITRQMVTGVRVLDSLLAVG 158

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+F+GSG+GKSTL+ M AR+   D  +I+L+GERGREV +F+   LG + LK+SV
Sbjct: 159 CGQRLGIFSGSGVGKSTLMGMIARNTDADVSVIALIGERGREVMDFVAHDLGPEGLKRSV 218

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V ATSDESP+ R     TA  IAEYF  +G  VLL+ DS+TRFA + REI   SGELP 
Sbjct: 219 IVSATSDESPLARVRGAYTATAIAEYFRDQGKQVLLLFDSLTRFAKAQREIGLASGELPA 278

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGY   VF  LP+LLER G      G++TA  +VLVDGD+ ++PI+D+VR I+DGHIVL
Sbjct: 279 TRGYTPGVFETLPKLLERAG--SFSMGSVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVL 336

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+LA+   YP +D L SVSRLA +   AD K+ V  +   +  + E  D+  +G Y+ G
Sbjct: 337 SRALAQRNHYPAIDVLQSVSRLAHRVLGADMKEAVRIVRRALAVYAEVEDLVRVGAYQQG 396

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSD 423
            D  LD+A+     +  FL Q   +
Sbjct: 397 SDAELDRAIAMRAELERFLTQGAQE 421


>gi|57237200|ref|YP_178212.1| flagellum-specific ATP synthase [Campylobacter jejuni RM1221]
 gi|57166004|gb|AAW34783.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni RM1221]
 gi|315057632|gb|ADT71961.1| Flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 461

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 I-EVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|149908454|ref|ZP_01897117.1| flagellum-specific ATP synthase [Moritella sp. PE36]
 gi|149808617|gb|EDM68552.1| flagellum-specific ATP synthase [Moritella sp. PE36]
          Length = 445

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 201/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ +GKPIDG   +  G  +     ++ P + R+++ K    G++ I+    +  GQ
Sbjct: 102 GRVLDGVGKPIDGKGEIITGQTTSFTAKRINP-LARKKISKPLDVGVKAINAMLTVGQGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFIE+ LG+  L +SVVV 
Sbjct: 161 RMGLFAGSGVGKSVLLGMMTRGSTADVVVVGLIGERGREVKEFIEEILGEEGLARSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     T++ IAEYF  +G NVLL++DS+TRFA + REIA   GE P  +G
Sbjct: 221 APADSSPLMRLKGCETSLAIAEYFRDQGLNVLLLMDSLTRFAQAQREIALAVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP+L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPQLVERAGNGSDEQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L + G YP +D   S+SR+     +   +            +++ +D+  IG Y  G D 
Sbjct: 341 LTDAGHYPAIDIEKSISRVMPMVTTDFHQAAARGFKQAYSLYQQNKDLVAIGAYSKGSDA 400

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D+A+   P +  FL+Q
Sbjct: 401 KIDRAIRLKPAMDQFLQQ 418


>gi|110677657|ref|YP_680664.1| flagellum-specific ATP synthase [Roseobacter denitrificans OCh 114]
 gi|109453773|gb|ABG29978.1| flagellum-specific ATP synthase [Roseobacter denitrificans OCh 114]
          Length = 449

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 229/386 (59%), Gaps = 2/386 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  + +    ++ L+    +GD VV   +     G++++++ D + I P    E ++L
Sbjct: 24  GRVCRVEAGVIHISGLAGKARIGDLVVVYRQGEPLSGEILQLDGDTLVILPDQDAEGVAL 83

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
            D         I+PS  W GR+I+  G PIDG   L +G  +  + S  P    R+ +  
Sbjct: 84  NDRAALLEARGIAPSQGWIGRIIDPFGNPIDGKPLL-RGAEARSLRSAPPEPALRRPMGT 142

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
              TG+ V++   P+  GQR+G+FAGSG+GKS+LL   A++   D V+++L+GERGRE+R
Sbjct: 143 RLNTGMSVLNTMLPVVKGQRVGLFAGSGVGKSSLLGHLAQNMTADVVVVALIGERGRELR 202

Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            F+E+ LG + LK+SVV+ ATSD+SP++R+     A+++AE+F   G + L++ DSITRF
Sbjct: 203 HFVEEVLGPEGLKRSVVICATSDQSPLIRRRCAWAAMSVAEHFRDMGLSALILADSITRF 262

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + RE+A  SGE PV RGYP S    +  L ER GP E  +G+IT + SVLV G +  +
Sbjct: 263 AEAHREVAVASGEAPVLRGYPPSTAHLIMSLCERAGPGEGAQGDITGIFSVLVAGSDMEE 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PIAD +R +LDGHIVLNR +AE GRYP +D L S+SR    A    E +L+S +   +  
Sbjct: 323 PIADILRGVLDGHIVLNREIAERGRYPAIDVLKSISRSLPAAADDIENELISIVRRYLSI 382

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVH 408
           +E+   +   G Y  G D  +D A+ 
Sbjct: 383 YEQNEMMIRAGLYSQGSDPDIDAAIQ 408


>gi|150390484|ref|YP_001320533.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens
           QYMF]
 gi|149950346|gb|ABR48874.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens
           QYMF]
          Length = 436

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 11/373 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G  E I  G  V   G    I+      GR+++ LG PIDG   +        +
Sbjct: 69  VLLMPLGEMEGIGPGSKVEATGSTLSINVGEALLGRILDGLGNPIDGKGPIEAHTAYPAM 128

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            S V P + R+ +++    G++ ID      +GQRIG+FAGSG+GKSTLL M AR+   D
Sbjct: 129 GSPVNPLL-RKTIKEPLSLGVKAIDGLLSCGNGQRIGIFAGSGVGKSTLLGMIARNTRAD 187

Query: 189 KVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREV+EFIE D   + LK+SVV+VATSD+  ++R    L A ++AEYF  
Sbjct: 188 INVIALIGERGREVKEFIEKDLKEEGLKRSVVIVATSDQPALIRMKGALLATSVAEYFRD 247

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              NV+L++DS+TRF+ + RE+    GE PV +GY  SVF+ LP+LLER G S+K  G I
Sbjct: 248 HNKNVMLLMDSLTRFSMAQREVGLAIGEPPVTKGYTPSVFAILPKLLERSGTSDK--GAI 305

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLVDGD+ N+PIAD+VR ILDGHIVL+R +A    YP +D LASVSR+ D     
Sbjct: 306 TGLYTVLVDGDDMNEPIADAVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVMDSIVGK 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  KL + L  ++  + +  D+  IG Y  G +  +D+A+ ++  + +FL Q+  +   +
Sbjct: 366 EHIKLANELKEILSTYNDAEDLINIGAYVKGSNPKIDRAIEKIDAVNEFLIQTTDE---K 422

Query: 428 DVFQE---ITKKL 437
             FQE   I KK+
Sbjct: 423 ITFQESVDIMKKI 435


>gi|170682099|ref|YP_001742360.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           SMS-3-5]
 gi|170519817|gb|ACB17995.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           SMS-3-5]
          Length = 445

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               ++A +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSVAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|83816428|ref|YP_446712.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855]
 gi|83757822|gb|ABC45935.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855]
          Length = 442

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/320 (48%), Positives = 203/320 (63%), Gaps = 4/320 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+A G+PIDG   LG  D    I    P  ++R  ++    TGIR ID F  +  
Sbjct: 102 LLGRVIDAGGRPIDGKGPLGT-DAREPIHRDPPSPLDRPLIDTPLSTGIRSIDAFLKMGK 160

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQR G+FAGSG+GKSTLL M AR    D  +I+L+GERGREVREFI D LG+  L++SV+
Sbjct: 161 GQRTGIFAGSGVGKSTLLGMIARRAEADVNVIALIGERGREVREFIVDNLGEEGLRRSVL 220

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V  T DE+ + R  A   A+ IAE+F  +G +VLL++DSITR A + REI    GE P  
Sbjct: 221 VAVTGDEAAMSRVKAASAAMAIAEHFRDRGQDVLLMMDSITRVAQAQREIGLAVGEPPTR 280

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF+ LPRLLER GP+E   G IT + +VLV+GD+ ++PI+D+ R ILDGHIVL+
Sbjct: 281 RGYPPSVFALLPRLLERAGPAEA--GTITGIFTVLVEGDDMSEPISDAARGILDGHIVLS 338

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP VD L SVSR+  +  S + +        L+  +EE  D+  +G Y  G 
Sbjct: 339 RELAEAGHYPAVDVLQSVSRVMPRVASLEAEAAAQEARELLSAYEEVEDLISVGAYEEGS 398

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D   D+AV   P + DFL+Q
Sbjct: 399 DPETDRAVEAYPALADFLQQ 418


>gi|294508647|ref|YP_003572706.1| flagellum-specific ATP synthase [Salinibacter ruber M8]
 gi|294344976|emb|CBH25754.1| Flagellum-specific ATP synthase [Salinibacter ruber M8]
          Length = 448

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/320 (48%), Positives = 203/320 (63%), Gaps = 4/320 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+A G+PIDG   LG  D    I    P  ++R  ++    TGIR ID F  +  
Sbjct: 108 LLGRVIDAGGRPIDGKGPLGT-DAREPIHRDPPSPLDRPLIDTPLSTGIRSIDAFLKMGK 166

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQR G+FAGSG+GKSTLL M AR    D  +I+L+GERGREVREFI D LG+  L++SV+
Sbjct: 167 GQRTGIFAGSGVGKSTLLGMIARRAEADVNVIALIGERGREVREFIVDNLGEEGLRRSVL 226

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V  T DE+ + R  A   A+ IAE+F  +G +VLL++DSITR A + REI    GE P  
Sbjct: 227 VAVTGDEAAMSRVKAASAAMAIAEHFRDRGQDVLLMMDSITRVAQAQREIGLAVGEPPTR 286

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF+ LPRLLER GP+E   G IT + +VLV+GD+ ++PI+D+ R ILDGHIVL+
Sbjct: 287 RGYPPSVFALLPRLLERAGPAEA--GTITGIFTVLVEGDDMSEPISDAARGILDGHIVLS 344

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP VD L SVSR+  +  S + +        L+  +EE  D+  +G Y  G 
Sbjct: 345 RELAEAGHYPAVDVLQSVSRVMPRVASLEAEAAAQEARELLSAYEEVEDLISVGAYEEGS 404

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D   D+AV   P + DFL+Q
Sbjct: 405 DPETDRAVEAYPALADFLQQ 424


>gi|195941358|ref|ZP_03086740.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi 80a]
 gi|216264447|ref|ZP_03436439.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 156a]
 gi|215980920|gb|EEC21727.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 156a]
          Length = 436

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 148/341 (43%), Positives = 222/341 (65%), Gaps = 4/341 (1%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I +G+ V+   +   I+ S    GRVI++LG+PID   S         I  K+ P +NR 
Sbjct: 78  IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRS 136

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
             E    TG++V+D F P+  GQR+G+F+GSG+GKSTLLSM A++   D  +I+ +GERG
Sbjct: 137 IFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLSMIAKNSNADVNVIAFIGERG 196

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE+ EFIE  LG+  LKKSV+VV+TSDESPI R      A  IAEYF  +G +V+L+ DS
Sbjct: 197 RELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVVLLFDS 256

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD
Sbjct: 257 ITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +P+AD+++++LDGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    +
Sbjct: 316 DFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARN 375

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L+  +++  D+   G Y  G +  +D A+ + P I +F+ Q
Sbjct: 376 LLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416


>gi|308068655|ref|YP_003870260.1| flagellum-specific ATP synthase [Paenibacillus polymyxa E681]
 gi|305857934|gb|ADM69722.1| Flagellum-specific ATP synthase [Paenibacillus polymyxa E681]
          Length = 439

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/387 (40%), Positives = 240/387 (62%), Gaps = 8/387 (2%)

Query: 50  VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVIN 107
           ++ GK +  L  +V+    + V + P+G  + I  G D+V       +   +   G+V++
Sbjct: 48  IYPGKTAKPLQAEVVGFRDNKVLLMPLGELQSIGPGCDVVGTGKPLNVQVGSELLGKVLD 107

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
            LG+P+DG  SL    ++      +P   +NR RV++    G+R ID    +  GQR+G+
Sbjct: 108 GLGQPLDG--SLIPSRMARYSTFNIPSNPLNRPRVQEPISIGVRAIDGLLTIGKGQRVGI 165

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225
           FAGSG+GKSTL+ M AR+   D  +I+L+GERGREV +FIE  LG + L++SVV+VATSD
Sbjct: 166 FAGSGVGKSTLMGMIARNTEADVNVIALIGERGREVLDFIERDLGPEGLERSVVIVATSD 225

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +  ++R    L A TIAEYF  +G NV+L++DS+TR+A + RE+    GE P  RGY  S
Sbjct: 226 QPALIRIKGALIATTIAEYFRDRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPS 285

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF+ LP+LLER G      G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A +
Sbjct: 286 VFASLPKLLERAGTGPT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANK 343

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G +P +D LAS+SR+       D+     ++  L+  ++++ D+  IG Y+ G +  +D+
Sbjct: 344 GHFPAIDVLASISRVMKDIAPRDQIDAAENIKRLMAVYKDSEDLINIGAYQQGSNAEIDE 403

Query: 406 AVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           ++ ++  I+DF +Q   + +  D  +E
Sbjct: 404 SMERIRDIWDFTRQRTDEKAELDEVRE 430


>gi|153951633|ref|YP_001397442.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939079|gb|ABS43820.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 461

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L     +GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLK--TGIGDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 I-EVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|126445125|ref|YP_001061232.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 668]
 gi|254182906|ref|ZP_04889499.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 1655]
 gi|254299701|ref|ZP_04967150.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 406e]
 gi|126224616|gb|ABN88121.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           668]
 gi|157809533|gb|EDO86703.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 406e]
 gi|184213440|gb|EDU10483.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 1655]
          Length = 435

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/397 (40%), Positives = 225/397 (56%), Gaps = 9/397 (2%)

Query: 46  GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101
           G+  V +  + D +  QV+  N +  ++ P      +  G  V      G  RI  S  W
Sbjct: 41  GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRIGRS--W 98

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+ IDG   LG GD  +         + ++ V      G+R I+    L  G
Sbjct: 99  LGRIVNGLGEAIDGRGPLG-GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QRIG+ AGSG+GKS LL M  R+   D V++ L+GERGREVREF++  LG+  L KSV+V
Sbjct: 158 QRIGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +DESP++R  A      IA +F   G NVLL++DS+TR+A + REIA + GE P  R
Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF  LP+L+E  G  E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R
Sbjct: 278 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   SVSR   +   A+   L   +  +I R E+ RD+  +GGY  G D
Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGAD 396

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              D+AV +   I  FL+Q   D++  D      K+L
Sbjct: 397 PATDEAVAKAARIDTFLRQDMLDVARHDATLAALKEL 433


>gi|253681702|ref|ZP_04862499.1| flagellar protein export ATPase FliI [Clostridium botulinum D str.
           1873]
 gi|253561414|gb|EES90866.1| flagellar protein export ATPase FliI [Clostridium botulinum D str.
           1873]
          Length = 439

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 163/393 (41%), Positives = 230/393 (58%), Gaps = 11/393 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRV 105
            ++  +N   + +V+    D V + P  +GE I +G    ++       +  S    G+V
Sbjct: 48  TIYNKENDPIMCEVVGFKEDNVILMP--LGELIGIGPGCRVIPSKNYLTVKCSDKLLGKV 105

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           +N LGK +  DD          + +  P  + R+R++    TG+R ID F     GQR+G
Sbjct: 106 LNGLGKSLKQDDEQLYIGTEYPLDTAPPDPLKRRRIKDSIATGVRAIDGFLTCGEGQRVG 165

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224
           +FAGSG+GKST L M AR    D  +I+L+GERGREV +FIE  LG+  LKKSV+V ATS
Sbjct: 166 IFAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATS 225

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           D+  ++R     TA  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +GY  
Sbjct: 226 DQPALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTP 285

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           SVF+ LPRL+ER G SEK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA 
Sbjct: 286 SVFAMLPRLMERSGMSEK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAG 343

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +  YP +D L SVSRL ++    + KK  S    L+  ++ + D+  IG Y  G +  +D
Sbjct: 344 KNHYPAIDVLNSVSRLMNEIADDEHKKTASFARDLLATYKNSEDLINIGAYAQGSNSKVD 403

Query: 405 KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            A+     I ++L+Q   + S    F E   KL
Sbjct: 404 MAIQYNDEINNYLRQGIKEHSE---FSESINKL 433


>gi|261407981|ref|YP_003244222.1| flagellar protein export ATPase FliI [Paenibacillus sp. Y412MC10]
 gi|329929287|ref|ZP_08283040.1| flagellar protein export ATPase FliI [Paenibacillus sp. HGF5]
 gi|261284444|gb|ACX66415.1| flagellar protein export ATPase FliI [Paenibacillus sp. Y412MC10]
 gi|328936656|gb|EGG33099.1| flagellar protein export ATPase FliI [Paenibacillus sp. HGF5]
          Length = 439

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 154/366 (42%), Positives = 230/366 (62%), Gaps = 7/366 (1%)

Query: 70  VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    I  G D+V       +   +   G+V++ LG+P+DG  S+    +    
Sbjct: 69  VLLMPLGELHSIGPGCDVVGTGKPLSVQVGSELLGKVLDGLGQPLDG--SIIPARMPHYS 126

Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
              VP   +NR RV++    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   
Sbjct: 127 THNVPQNPLNRPRVQEPISIGVRAIDGLLSIGKGQRVGIFAGSGVGKSTLMGMIARNTSA 186

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREV +FIE  LG + LK+SVV+VATSD+  ++R    L A TIAEYF 
Sbjct: 187 DVNVIALIGERGREVLDFIERDLGPEGLKRSVVIVATSDQPALIRIKGALIATTIAEYFR 246

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G NV+L++DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G      G+
Sbjct: 247 DRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GS 304

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VLVDGD+ N+PIAD+VR ILDGHIVLNR++A +G +P +D LAS+SR+      
Sbjct: 305 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRNIANKGHFPAIDVLASISRVMKDISP 364

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            ++     ++  L+  ++++ D+  IG Y+ G +  +D+++  +  I+DF KQ  ++ ++
Sbjct: 365 EEQIDASENVKRLMAIYKDSEDLINIGAYQQGSNADIDESIEYIGRIWDFTKQKVNEKTT 424

Query: 427 EDVFQE 432
            D  QE
Sbjct: 425 LDEVQE 430


>gi|289523571|ref|ZP_06440425.1| flagellar protein export ATPase FliI [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503263|gb|EFD24427.1| flagellar protein export ATPase FliI [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 442

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 160/381 (41%), Positives = 232/381 (60%), Gaps = 7/381 (1%)

Query: 43  VCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSA 99
           V +GD   + ++  +S    +V+  N D V + P+G   +I  G D+V    +  +    
Sbjct: 44  VRVGDLCEIRYRDSSSSLCAEVVGFNEDRVLLMPLGELADIGPGCDVVAVGQKLGVRVGP 103

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+N LG+PID    +  GD+   + ++ P  + R+ +      G++ ID    L 
Sbjct: 104 GLLGRVLNGLGEPIDDKGPVMAGDV-YPLYARPPHPLLRKSISSPLPVGVKAIDGMLTLG 162

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
            GQRIG+F+GSG+GKSTL+ M  R+   +  +I L+GERGREV EF+E  LG + LK+SV
Sbjct: 163 RGQRIGIFSGSGVGKSTLMGMMVRNTEAEVSVIGLIGERGREVGEFLERDLGSSGLKRSV 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVATSD+ P++R  A LTA  IAEYF  KG +VLL++DSITR A + R++    GE P 
Sbjct: 223 VVVATSDQPPLVRLKAALTATAIAEYFRDKGKDVLLLMDSITRVAMAQRDVGLAIGEPPA 282

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGY  SVF+ LP+LLER G    E+G+IT + +VLV+GD+ N+P+AD+VR ILDGHIVL
Sbjct: 283 TRGYTPSVFAFLPKLLERAGAG--ERGSITGIYNVLVEGDDMNEPVADTVRGILDGHIVL 340

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA +G YP +D L SVSR+     S         +  L+  +E+  D+  IG Y+ G
Sbjct: 341 SRKLASKGHYPAIDILRSVSRVMPNIVSQKHLAAAQRVRELLAIYEDAEDLVNIGAYKVG 400

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            +  +D A+  +  + DFL+Q
Sbjct: 401 SNPNIDWALEHLDDVLDFLRQ 421


>gi|330719817|gb|EGG98317.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC2047]
          Length = 447

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/391 (38%), Positives = 234/391 (59%), Gaps = 4/391 (1%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
           V  T+  +   V LGD       N  ++  +V+    + V++ P+G  E I  G  V   
Sbjct: 32  VGLTLEAVGCNVALGDHCEIDMANGRHIEAEVVGFADNRVFLMPLGPVEGIRPGARVRPV 91

Query: 91  GRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            R +  P      GRV+N +G+P+D    L + D    +  +    ++R  + +    GI
Sbjct: 92  QRSKEVPVGYGLLGRVLNGVGEPLDDKGPL-QADAKTGLEGQYINPLSRNPIHESLDVGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ LVGERGREV+EFI+D 
Sbjct: 151 RAINALLTVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADIVVVGLVGERGREVKEFIDDC 210

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG   L ++VVV + +D+SP++R  + +   +IAEYF  +G NVLL++DS+TR+A + RE
Sbjct: 211 LGPAGLARAVVVASPADDSPLMRLRSAMLTTSIAEYFRDQGKNVLLLMDSLTRYAQAQRE 270

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +A   GE P  +GYP SVF++LP+L+ER G +   +G+ITA  +VL +GD+  DP+AD+ 
Sbjct: 271 LALAVGEPPATKGYPPSVFAKLPQLVERAGNAAAGEGSITAFYTVLTEGDDQQDPVADAA 330

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+R LAE G YP +D  ASVSR+  +  + ++ +L      +   ++++ D
Sbjct: 331 RAILDGHIVLSRRLAEAGHYPAIDVEASVSRVMPQVVNPEQMQLAQQFRQVYANYQQSSD 390

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +G Y  G +   D A+ ++P++  FL+Q
Sbjct: 391 LISVGAYVAGSNPETDFAIQRMPVMKQFLQQ 421


>gi|220917455|ref|YP_002492759.1| ATPase, FliI/YscN family [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955309|gb|ACL65693.1| ATPase, FliI/YscN family [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 435

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 159/382 (41%), Positives = 221/382 (57%), Gaps = 12/382 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117
           +V+ +  D   + P G    + L   V   GR    R  P     GRV++ LG+P+DG  
Sbjct: 58  EVVGLRDDRAVLVPFGDLGGVGLDAEVVPTGRAHTIRAGPG--LLGRVLDGLGRPLDGA- 114

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G     +    P  + R+ V      G+RV+D F     GQRIG+FAGSG+GKSTL
Sbjct: 115 PLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQRIGLFAGSGVGKSTL 174

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    D  ++ LVGERGREVREF+E  LG + L +SVVV ATSD   ++R  A  
Sbjct: 175 LGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAH 234

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AE+F+ +GD VLL++DS+TR+A ++RE+   +GE P  +GYP SVF+ LPRLLER
Sbjct: 235 VATAVAEWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLER 294

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   + +G ITAV +VLV G +  +PIAD VR ILDGH+VL+R++A  GR+P VDPL S
Sbjct: 295 AG--NRARGGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVASGGRFPAVDPLQS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     +         +  L+      RD+  +G YR G D   D A+ ++P I  F
Sbjct: 353 LSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEADLALARLPAIEAF 412

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L+Q    L     F+E  ++L+
Sbjct: 413 LRQP---LGEAAPFEETLRRLE 431


>gi|188588315|ref|YP_001920205.1| flagellar protein export ATPase FliI [Clostridium botulinum E3 str.
           Alaska E43]
 gi|251778789|ref|ZP_04821709.1| flagellar protein export ATPase FliI [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|188498596|gb|ACD51732.1| flagellar protein export ATPase FliI [Clostridium botulinum E3 str.
           Alaska E43]
 gi|243083104|gb|EES48994.1| flagellar protein export ATPase FliI [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 435

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 155/331 (46%), Positives = 215/331 (64%), Gaps = 8/331 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G +I+ LGKP+ G++ +   D  +E  +  P  + R+R+++   TGIR ID F     GQ
Sbjct: 102 GEIIDGLGKPLRGEELVEGEDYPLE--NNPPDPLKRKRIKEIMPTGIRAIDGFLTCGDGQ 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKST L M AR    D  +I+L+GERGREV EFIE  LG + +KKSVVV 
Sbjct: 160 RIGIFAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLEFIEKDLGPEGMKKSVVVC 219

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R    LTA  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +G
Sbjct: 220 ATSDKPALIRLKGALTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKG 279

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF++LP+L+ER G SE   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RS
Sbjct: 280 YTPSVFAKLPKLMERSGTSED--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRS 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA +  YP +D L SVSRL +     +  +  S    L+  ++E+ D+  IG Y  G + 
Sbjct: 338 LAHKNHYPAIDILNSVSRLMNSIAPPEHIQAASIARDLLATYKESEDLINIGAYVKGSNK 397

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            +D A+     I +FL+Q+ ++ S+   F+E
Sbjct: 398 KIDLAISYHDKIEEFLRQTVNEKSN---FEE 425


>gi|294141005|ref|YP_003556983.1| ATPase [Shewanella violacea DSS12]
 gi|293327474|dbj|BAJ02205.1| ATPase, FliI/YscN family [Shewanella violacea DSS12]
          Length = 441

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/377 (43%), Positives = 228/377 (60%), Gaps = 12/377 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG---D 116
           +VI +  D V + P  +   +  G LV   G   ++   +   GRV++ LG  +DG   D
Sbjct: 65  EVIAVKGDEVLLSPFDVTSWLQTGALVEPMGHGHQVLLGSELLGRVVDGLGDVMDGYPLD 124

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
               + +         P  ++R  ++     GIR ID       GQRIG+FA +G GKST
Sbjct: 125 ACECRPNYG-----AAPNPLSRSLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKST 179

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           LL M A     D ++++LVGERGREVREFIE  L    + ++V+VVATSD  P+ R  A 
Sbjct: 180 LLGMIASHCEADVIVLALVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKAT 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LTA TIAEYF  +G NVLL++DS+TRFA S REI+  +GE PV+ GYP SVF  L  L+E
Sbjct: 240 LTATTIAEYFRDQGKNVLLMVDSLTRFARSAREISLAAGEAPVSNGYPPSVFVNLSALVE 299

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R GP+ K  G+IT V +VLV+GDN N+PIAD VRS+LDGHIVL+R LA  G YP +D  A
Sbjct: 300 RAGPAAK--GSITGVYTVLVEGDNMNEPIADEVRSLLDGHIVLSRKLAGAGHYPAIDINA 357

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+ D+  + ++KK  + +  ++  ++E + +  +G Y  G D   D+AV +   I D
Sbjct: 358 SVSRVMDQIVTQEQKKNAAKMRQMLALYDEVQLLLRVGEYVQGQDKQTDEAVMRYGAIKD 417

Query: 416 FLKQSPSDLSSEDVFQE 432
           FL+QS  + S  +V Q+
Sbjct: 418 FLRQSVDEFSPYEVSQQ 434


>gi|224534379|ref|ZP_03674957.1| flagellar protein export ATPase FliI [Borrelia spielmanii A14S]
 gi|224514481|gb|EEF84797.1| flagellar protein export ATPase FliI [Borrelia spielmanii A14S]
          Length = 436

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/406 (39%), Positives = 245/406 (60%), Gaps = 6/406 (1%)

Query: 36  VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  ++ Q  N     +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAIGDLCLIDQRNNKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   S         I  K+ P +NR   E+   TG++V+D
Sbjct: 92  EINLSEELLGRVIDSLGRPIDNKGSFLNNRYKELIFKKINP-INRSIFEEQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEFELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+AD+++++L
Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GTGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    +L+  +++  D+   
Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLVRT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437
           G Y  G +  +D A+ + P I DF+ Q  ++    E++  EI K L
Sbjct: 390 GIYLKGSNKDVDFAISKYPRIIDFISQGINETFDFENLEDEIRKIL 435


>gi|168698707|ref|ZP_02730984.1| Flagellar biosynthesis/type III secretory pathway ATPase [Gemmata
           obscuriglobus UQM 2246]
          Length = 430

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/407 (39%), Positives = 237/407 (58%), Gaps = 10/407 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEI 81
           GG + S+T     +TC +    +GD      ++ +  L +VI    D+ Y+ P    E +
Sbjct: 14  GGRLKSVTG---RMTC-AIPAAVGDHCAILPRDGEPVLAEVIGFENDLAYLVPFDAAENL 69

Query: 82  SLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G+  + P+     GRVI+ LG+P+DG   L    L   +    PPAM RQR
Sbjct: 70  QPGMPVLRKGKGLMVPTGKNLLGRVIDGLGRPLDGKGPLADCPLK-PVNRPAPPAMERQR 128

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + + F TGIR ID       GQR+G+FAGSG+GKSTLL   A+    D  +I+L+GERGR
Sbjct: 129 IREPFVTGIRAIDSVLTCGGGQRVGIFAGSGVGKSTLLGEVAKGSQADVNVIALIGERGR 188

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV  F+ED LG + + +SVV+VAT +++ ++R  A  +A+ IA+YF S+  NVL ++DS+
Sbjct: 189 EVAPFLEDVLGPEGMARSVVIVATCEQTALMRVRAAQSAIAIADYFRSESQNVLFVIDSL 248

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR A + RE+    GE P +RGY  SVF  L   +ER+G      G ITA+++VLVDG +
Sbjct: 249 TRLAMAQRELGLLLGEPPSSRGYTPSVFQTLANTVERLG--NAAVGGITALLTVLVDGGD 306

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++PIAD VR ++DGHIVL+R +AE G YP +D   S+SR+A      +  K    L  +
Sbjct: 307 MDEPIADYVRGLVDGHIVLDRKIAERGFYPAIDVSRSISRVATDVVDRESAKAARKLRAI 366

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +    + +D+  IG Y  G+D  +DKA+  +P +  FL+Q   + SS
Sbjct: 367 MATHADIQDMLRIGAYTRGMDPQVDKALELMPKVEKFLRQDVGERSS 413


>gi|52841984|ref|YP_095783.1| flagellum-specific ATP synthase FliI [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629095|gb|AAU27836.1| nucleotide binding protein FliI [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 450

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 153/370 (41%), Positives = 228/370 (61%), Gaps = 3/370 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + VY+  +G  + I+ G  +   GR  ++S      GR++N  G  ID D   
Sbjct: 64  EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPP 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G+   +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL 
Sbjct: 123 GEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIE  LG + L+++VVV A +DESP++R      A
Sbjct: 183 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G
Sbjct: 243 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+S
Sbjct: 303 NGTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L 
Sbjct: 363 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 422

Query: 419 QSPSDLSSED 428
           Q   +  S D
Sbjct: 423 QGMDEQVSYD 432


>gi|148359301|ref|YP_001250508.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Corby]
 gi|296107348|ref|YP_003619048.1| flagellum-specific ATP synthase [Legionella pneumophila 2300/99
           Alcoy]
 gi|1938361|gb|AAB52239.1| nucleotide binding protein FliI [Legionella pneumophila]
 gi|148281074|gb|ABQ55162.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Corby]
 gi|295649249|gb|ADG25096.1| flagellum-specific ATP synthase [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610456|emb|CBX00027.1| flagellum-specific ATP synthase FliI [Legionella pneumophila 130b]
          Length = 449

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 153/370 (41%), Positives = 228/370 (61%), Gaps = 3/370 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + VY+  +G  + I+ G  +   GR  ++S      GR++N  G  ID D   
Sbjct: 63  EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPP 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G+   +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL 
Sbjct: 122 GEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIE  LG + L+++VVV A +DESP++R      A
Sbjct: 182 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVA 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G
Sbjct: 242 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+S
Sbjct: 302 NGTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L 
Sbjct: 362 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 421

Query: 419 QSPSDLSSED 428
           Q   +  S D
Sbjct: 422 QGMDEQVSYD 431


>gi|109899349|ref|YP_662604.1| flagellum-specific ATP synthase [Pseudoalteromonas atlantica T6c]
 gi|109701630|gb|ABG41550.1| flagellar protein export ATPase FliI [Pseudoalteromonas atlantica
           T6c]
          Length = 444

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 170/441 (38%), Positives = 247/441 (56%), Gaps = 17/441 (3%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  +  L +   +  VV  G +  +  +  T+  +   + +G   + Q  + +   +V+ 
Sbjct: 6   LGNIKALQQQVPQAPVVAAGKL--VRGIGLTLEAVGCQMPVGSQCLIQTVDGEIEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
               I Y+ P    + I  G  V    R +  P      GRV++  G+P+DG   LG   
Sbjct: 64  FAEHITYLMPTQAVKGIVPGSRVQPLNREQGLPVGMSLLGRVVDGNGQPLDG---LG--- 117

Query: 124 LSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +++   +VP   P MN   R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 118 -AIKAEKRVPLTRPPMNPLSRKPIREPLDVGVRAINSMITVGSGQRMGLFAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ LVGERGREV+EFI+D LGD   +KSVVV A +D SP++R     
Sbjct: 177 LGMMTRGTSADVVVVGLVGERGREVKEFIQDILGDEERQKSVVVAAPADTSPLMRLKGCE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TAVTIAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER
Sbjct: 237 TAVTIAEYFRDKGMNVLLLVDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVER 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   + +G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LA+ G YP +D  AS
Sbjct: 297 AGNGGEHQGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRQLADSGHYPAIDIEAS 356

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S +  ++   +  +   +++ RD+  IG Y  G D  +D ++   P I  F
Sbjct: 357 ISRVMPMVVSPEHVQVARRIRQVYSTYQQNRDLISIGAYTRGNDPRIDLSIKAEPAINAF 416

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q    +   D   E   KL
Sbjct: 417 LQQGMQQILPFDESVETMVKL 437


>gi|66046683|ref|YP_236524.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257390|gb|AAY38486.1| ATPase FliI/YscN [Pseudomonas syringae pv. syringae B728a]
          Length = 452

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q+
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428


>gi|240145503|ref|ZP_04744104.1| flagellar protein export ATPase FliI [Roseburia intestinalis L1-82]
 gi|257202318|gb|EEV00603.1| flagellar protein export ATPase FliI [Roseburia intestinalis L1-82]
          Length = 435

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 152/374 (40%), Positives = 235/374 (62%), Gaps = 6/374 (1%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
            ++ + +N   + +V+      + + P    E I +G +V + G    +       G  +
Sbjct: 45  IIIDREQNISTMAEVVGFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTL 104

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           + +G+P D ++ L   D  +E +   P  M R+ +++    G++ +D    +  GQRIG+
Sbjct: 105 DGIGRPTDVEELLLPYDYPVEALP--PDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGI 162

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           FAGSG+GKSTLL MFAR+   D  +I+L+GERGREVREF+E  LG+  +K+SVV+VATSD
Sbjct: 163 FAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSD 222

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +  ++R  A  TA  IAEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP S
Sbjct: 223 KPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPS 282

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           V+SE+P+LLER G S  +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++
Sbjct: 283 VYSEMPKLLERAGTS--DKGSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQK 340

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
             YP +D L S+SR+     +++ K+L   L +++  + E  D+  IG Y+ G +  +D 
Sbjct: 341 NHYPAIDVLQSISRVMSSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDY 400

Query: 406 AVHQVPIIYDFLKQ 419
           A+ +   + +FL Q
Sbjct: 401 AIQKNQAVNEFLMQ 414


>gi|115353163|ref|YP_775002.1| flagellar protein export ATPase FliI [Burkholderia ambifaria AMMD]
 gi|115283151|gb|ABI88668.1| flagellar protein export ATPase FliI [Burkholderia ambifaria AMMD]
          Length = 513

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D S+   S  P  ++R+ +      G+R I+    +  G
Sbjct: 173 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHSVLDVGVRAINALLTVGRG 230

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 411 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 470

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 471 AQLDRAIALYPRIESFLQQ 489


>gi|172062018|ref|YP_001809670.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           MC40-6]
 gi|171994535|gb|ACB65454.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           MC40-6]
          Length = 513

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D S+   S  P  ++R+ +      G+R I+    +  G
Sbjct: 173 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 230

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 411 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 470

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 471 AQLDRAIALYPRIESFLQQ 489


>gi|226313066|ref|YP_002772960.1| flagellum-specific ATP synthase [Brevibacillus brevis NBRC 100599]
 gi|226096014|dbj|BAH44456.1| flagellum-specific ATP synthase [Brevibacillus brevis NBRC 100599]
          Length = 439

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 229/381 (60%), Gaps = 11/381 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDG 115
           + +V+    + V + P+G   EI  G  V   GR    ++ P     G +++ LG+P  G
Sbjct: 58  IAEVVGFRENKVLLMPLGELTEIGPGCDVVATGRSLDVKVGPE--ILGSILDGLGRPYQG 115

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             SL  G  S    +  P  + R R+++    G+R ID    +  GQR+G+FAGSG+GKS
Sbjct: 116 --SLPFGLTSYPTNNMPPNPILRPRIQEPLSVGVRAIDGLLTIGKGQRVGIFAGSGVGKS 173

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234
           TL+ M AR+   D  +I L+GERGREV EFIE  LG+  LK+SVVVVATSD+  ++R   
Sbjct: 174 TLMGMIARNTTADINVIGLIGERGREVMEFIERDLGEEGLKRSVVVVATSDQPAMIRIKG 233

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            + A +IAEYF  +G NV+L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+L+
Sbjct: 234 AMIATSIAEYFRDRGMNVMLMMDSVTRFAMAQREVGLAIGEPPATRGYTPSVFAMLPKLM 293

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G ++K  G+ITA  +VLVD D+ NDPIAD+VR ILDGHIVL+R +A +G +P +D +
Sbjct: 294 ERAGTADK--GSITAFYTVLVDSDDMNDPIADAVRGILDGHIVLDRKIAHKGHFPAIDVM 351

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           ASVSR+ ++   ++       L   +  F E  D+  IG Y+PG +  +D A+    II 
Sbjct: 352 ASVSRVMNEIVDSNHLDAARQLKKHLATFREAEDLINIGAYKPGSNREIDAAIRYRDIIS 411

Query: 415 DFLKQSPSDLSS-EDVFQEIT 434
            F  Q   + S+ +   Q +T
Sbjct: 412 GFTAQGTHEPSTLQGAIQALT 432


>gi|218892348|ref|YP_002441215.1| type III secretion system ATPase [Pseudomonas aeruginosa LESB58]
 gi|218772574|emb|CAW28357.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           LESB58]
          Length = 440

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 148/336 (44%), Positives = 209/336 (62%), Gaps = 4/336 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R++      GRV++ LG+P DG     +      +    PP M+R+ +E+    G+R
Sbjct: 94  GMHRVAVGEHLLGRVLDGLGRPFDGSPP-AEPAAWYPVYRDAPPPMSRRLIERPLSLGVR 152

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GKSTLL+   R+   D  I++LVGERGREVREFIE  L
Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTILALVGERGREVREFIESDL 212

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI
Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF+ LPRL+ER G SE+  G+ITA+ +VLV+GD+ ++P+AD  R
Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   + ++EE   +
Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             IG Y+ G D   D+A+ ++  I  +L+Q   + S
Sbjct: 391 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 426


>gi|37527629|ref|NP_930973.1| type III secretion system ATPase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787064|emb|CAE16139.1| Type III secretion component protein SctN [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 440

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 162/406 (39%), Positives = 236/406 (58%), Gaps = 27/406 (6%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
           T++ L++ +    F  HQ   +  LG++  I+ +   + P G   ++ +GD +       
Sbjct: 57  TLSLLAEVI---GFQQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGDYLL------ 105

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
                   G+V++ LG P  G   L +      +    P  M+R+R+E     G+R ID 
Sbjct: 106 --------GQVLDGLGNPFSGGQ-LPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDG 156

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
                 GQR+G+FA +G GKSTLLS   RS   D  +++L+GERGREVREFIE  LG+  
Sbjct: 157 LLTCGEGQRMGIFAAAGGGKSTLLSTLIRSAEVDVTVLALIGERGREVREFIESDLGEEG 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK+SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +
Sbjct: 217 LKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 276

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  RGYP SVF+ LPRL+ER G S  +KG+ITA+ +VLV+GD+  +P+AD  RSILD
Sbjct: 277 GEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILD 334

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHI+L+R LA    YP +D L S SR+ ++  + + +     L   + ++EE   +  IG
Sbjct: 335 GHIILSRKLAAANHYPAIDVLRSASRVMNQIITPEHQAQAGLLRKWLAKYEEVELLLQIG 394

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL-SSEDVFQEITK 435
            Y+ G D + D A+  +  I ++L+Q    PSDL  +    Q+ITK
Sbjct: 395 EYQKGQDPVADNAIAHIEAIRNWLRQGTHEPSDLPQTLAQLQQITK 440


>gi|330961223|gb|EGH61483.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 452

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q+
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428


>gi|225552414|ref|ZP_03773354.1| flagellar protein export ATPase FliI [Borrelia sp. SV1]
 gi|225371412|gb|EEH00842.1| flagellar protein export ATPase FliI [Borrelia sp. SV1]
          Length = 436

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 156/387 (40%), Positives = 235/387 (60%), Gaps = 5/387 (1%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  +   +N   +  +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAIGDLCLIDQRNGKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   S         I  K+ P +NR   E    TG++V+D
Sbjct: 92  EINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRSIFEDQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+GSG+GKSTLL M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+AD+++++L
Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    +L+  +++  D+   
Sbjct: 330 DGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           G Y  G +  +D A+ + P I DF+ Q
Sbjct: 390 GIYLKGSNKDVDFAISKYPKIIDFISQ 416


>gi|283955375|ref|ZP_06372874.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793135|gb|EFC31905.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 459

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 238/425 (56%), Gaps = 12/425 (2%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  S
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG     +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKFDDTVLIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERAG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S S
Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL 
Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414

Query: 419 QSPSD 423
           Q+P +
Sbjct: 415 QNPEE 419


>gi|323975941|gb|EGB71035.1| flagellar protein export ATPase FliI [Escherichia coli TW10509]
 gi|327254539|gb|EGE66155.1| flagellum-specific ATP synthase [Escherichia coli STEC_7v]
          Length = 445

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++    + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTRPEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|28869165|ref|NP_791784.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967558|ref|ZP_03395706.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato T1]
 gi|302059426|ref|ZP_07250967.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato
           K40]
 gi|302134809|ref|ZP_07260799.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|28852405|gb|AAO55479.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927859|gb|EEB61406.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato T1]
 gi|331017001|gb|EGH97057.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 452

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q+
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428


>gi|170700808|ref|ZP_02891799.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           IOP40-10]
 gi|170134295|gb|EDT02632.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           IOP40-10]
          Length = 513

 Score =  273 bits (697), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D S+   S  P  ++R+ +      G+R I+    +  G
Sbjct: 173 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 230

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 411 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 470

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 471 AQLDRAIALYPRIESFLQQ 489


>gi|283782095|ref|YP_003372850.1| ATPase, FliI/YscN family [Pirellula staleyi DSM 6068]
 gi|283440548|gb|ADB18990.1| ATPase, FliI/YscN family [Pirellula staleyi DSM 6068]
          Length = 455

 Score =  273 bits (697), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/321 (46%), Positives = 203/321 (63%), Gaps = 4/321 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+A G+ ID   +    D  + +  K P A +R R++  F TG+R ID       
Sbjct: 96  LLGRVIDARGRVIDNKPAPVLAD-RVPLDRKPPAATSRPRIDTTFSTGVRAIDGLLTCGV 154

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQRIGVFAGSG+GKS  L M A+    D ++I L+GERGREV EF+E  LG   L +SV 
Sbjct: 155 GQRIGVFAGSGVGKSVTLGMMAKYSSADVIVIGLIGERGREVNEFLERDLGPTGLARSVC 214

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSDE  I+R  A  TA  +AEYF  +G NVLL++DS+TRFA + REI   +GE P  
Sbjct: 215 VVATSDEPAIMRVQAASTATAVAEYFRDQGKNVLLMMDSLTRFALAQREIGLAAGEPPTT 274

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF+ LPRL+ER G     +G+ITA+ SVLV+GD+ N+P++D+VR +LDGH++L+
Sbjct: 275 RGYPPSVFALLPRLVERAG--RTPQGSITAIYSVLVEGDDVNEPVSDTVRGLLDGHVILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA +  YP ++ L S+SRL  +  +  ++   + +  L+  + E  D+  IG YR G 
Sbjct: 333 RKLAAQSHYPAIEVLGSISRLFTEITTPQQRSAAAIVRELLSAYREHEDLISIGAYRTGA 392

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +  +D A+     I  FLKQS
Sbjct: 393 NPTVDTAIAMRGEILQFLKQS 413


>gi|330876013|gb|EGH10162.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330967114|gb|EGH67374.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 452

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q+
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428


>gi|237799238|ref|ZP_04587699.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022093|gb|EGI02150.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 394

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 19  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 78

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 79  GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 137

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 138 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 197

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+I
Sbjct: 198 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 257

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 258 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 317

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q+
Sbjct: 318 EHMAQAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 370


>gi|121533760|ref|ZP_01665587.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans
           Nor1]
 gi|121307751|gb|EAX48666.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans
           Nor1]
          Length = 439

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 163/366 (44%), Positives = 225/366 (61%), Gaps = 15/366 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V + P+G  E I  G  V    R  ++       GRV++ LG PIDG   +
Sbjct: 60  EVVGFRPNHVLLMPIGELEGIGPGCSVIAANRTLKVGVGPDLLGRVLDGLGNPIDGKGPV 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  PP ++R+R+ +    G+R ID F  L  GQR+G+ AGSG+GKSTLL 
Sbjct: 120 ATA-AEYPLHALPPPPLSRRRITEPLSVGVRAIDGFLTLGRGQRVGIMAGSGVGKSTLLG 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GERGREVREFIE  LG D LK+SVVVVATSD+  ++R    +TA
Sbjct: 179 MIARNTEADISVIALIGERGREVREFIERDLGEDGLKRSVVVVATSDQPALVRIKGAMTA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE+F  +G +V L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER G
Sbjct: 239 TAIAEFFRDQGKDVTLMMDSVTRFAMAQREVGLTVGEPPATRGYTPSVFAMLPKLLERSG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               +KG+IT + +VL DGD+ N+PIAD+VRSILDGHIVL+R LA +  YP +D LASVS
Sbjct: 299 TG--DKGSITGIYTVLADGDDMNEPIADAVRSILDGHIVLSRDLAAQNHYPAIDVLASVS 356

Query: 359 R----LADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           R    + DK  W A +K     L  ++  + E  D+  IG Y  G +  +D+AV  +  +
Sbjct: 357 RVMLDIVDKEHWQAAQK-----LRSVLATYHEAEDLINIGAYAAGSNPRIDQAVRLIDGV 411

Query: 414 YDFLKQ 419
             FL+Q
Sbjct: 412 RRFLRQ 417


>gi|304312790|ref|YP_003812388.1| Flagellum-specific atp synthase [gamma proteobacterium HdN1]
 gi|301798523|emb|CBL46753.1| Flagellum-specific atp synthase [gamma proteobacterium HdN1]
          Length = 454

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 149/376 (39%), Positives = 223/376 (59%), Gaps = 3/376 (0%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G  ++      D   +V+  + D +++ PV     +  GD V  +    R+       GR
Sbjct: 60  GHCIIRNQDIGDVEAEVVGFSGDKLFLMPVEASLGLKPGDRVIPFREVSRVPVGMQLLGR 119

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++  GKP+DG  +L   +        + P + R  +      G+R I+    +  GQR+
Sbjct: 120 VLDGRGKPLDGKGALDMHNAESLQREAINP-LQRTPISMPLDVGVRAINGLLAVGRGQRM 178

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVAT 223
           G+FAGSG+GKS LL M  +    D  ++ L+GERGREV+EFIE  LG+  LK+SVVV + 
Sbjct: 179 GLFAGSGVGKSVLLGMMTKFTTADITVVGLIGERGREVKEFIEQILGEEGLKRSVVVASP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +DESP++R  A +    IAE+F  +G NVLL++DS+TR+A + REIA + GE P  +GYP
Sbjct: 239 ADESPLMRLRAAVLCTAIAEHFRDQGKNVLLLMDSLTRYAQAQREIALSVGEPPATKGYP 298

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SVF++LP L+ER G   +  G+ITA  +VL +GD+  DP+ADS R+ILDGHIVL+R+LA
Sbjct: 299 PSVFAKLPALVERAGNGREGGGSITAFYTVLTEGDDVQDPVADSARAILDGHIVLSRALA 358

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           EEG+YP +D  AS+SR   +  SA+  K       L  R++++RD+  +G Y  G D   
Sbjct: 359 EEGQYPAIDIEASISRAMPQIVSAEHLKKAQGFKRLYARYQQSRDLISVGAYVKGSDRET 418

Query: 404 DKAVHQVPIIYDFLKQ 419
           D A+ ++  +  +L Q
Sbjct: 419 DLAISKIAHLKGYLSQ 434


>gi|119899009|ref|YP_934222.1| ATP synthase [Azoarcus sp. BH72]
 gi|119671422|emb|CAL95335.1| ATP synthase [Azoarcus sp. BH72]
          Length = 468

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 145/321 (45%), Positives = 197/321 (61%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   +        V P +NR  + +    GIR I+    + 
Sbjct: 125 AMLGRVVDGAGRPLDGLGPLNTVETRSLQGRPVNP-LNRAPIAQPLDVGIRAINSLLTVG 183

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS L+ M AR    D +++ L+GERGREV+EFIE  LG +  K+SV
Sbjct: 184 RGQRLGLFAGSGVGKSVLIGMMARFTSADIIVVGLIGERGREVKEFIEHNLGAEGRKRSV 243

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP++R      A TIAEYF  +G  VLLI+DS+TR+A + REIA   GE PV
Sbjct: 244 VVAAPADNSPLMRLQGAAYATTIAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPV 303

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP SVF+ LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH VL
Sbjct: 304 TRGYPPSVFARLPALVERAGNGPDGGGSITAFYTVLAEGDDQQDPIADSARAILDGHFVL 363

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+LA++G YP +D   S+SR            LV     L  R++ +RD+  +G Y+PG
Sbjct: 364 SRNLADQGHYPAIDIEQSISRAMHTLVDNAHFDLVRRFKQLFSRYQRSRDLIAVGAYQPG 423

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            + +LD AV   P +  FL+Q
Sbjct: 424 AEPLLDMAVALYPRLEAFLQQ 444


>gi|171321711|ref|ZP_02910628.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MEX-5]
 gi|171093012|gb|EDT38244.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MEX-5]
          Length = 517

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D S+   S  P  ++R+ +      G+R I+    +  G
Sbjct: 177 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 234

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 235 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 294

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 295 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 354

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 355 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 414

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 415 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 474

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 475 AQLDRAIALYPRIESFLQQ 493


>gi|300871682|ref|YP_003786555.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Brachyspira pilosicoli 95/1000]
 gi|300689383|gb|ADK32054.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI
           [Brachyspira pilosicoli 95/1000]
          Length = 489

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 163/390 (41%), Positives = 236/390 (60%), Gaps = 10/390 (2%)

Query: 42  YVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPS 98
           +  LGD +    KN D     +VI      V +   G    I+ G++V+ + +   I  S
Sbjct: 55  FAKLGD-ICRIYKNDDTYIDAEVIGFRNQDVLLSTYGSVNGITFGNMVYSFDKPLSIICS 113

Query: 99  ACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
               G V+N +GKP+ G      +  + +   S  P  +NR R++K  +TG+R ID    
Sbjct: 114 EKILGTVLNGMGKPLSGGGHKFYETPIPINHTSVNP--LNRPRIKKNIQTGVRAIDGLLT 171

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           +  GQR+ + +G+G+GKSTLLSM AR+   D  +I+L+GER REV +FIE  LG+  LK+
Sbjct: 172 VGKGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALIGERRREVLDFIERDLGEEGLKR 231

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVVVATSD++P+LR  A  TA TIAEYF  +G +V+ ++DS+TRFA + REI  + GE 
Sbjct: 232 SVVVVATSDDAPLLRVRAAYTATTIAEYFRDQGKDVMFMVDSVTRFALAQREIGLSRGEP 291

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  RGY  SVFSEL +LLER G S   KG ITA  +VLV+GD+ ++PI D+VR ILDGHI
Sbjct: 292 PTTRGYTPSVFSELAQLLERTGTS--SKGTITAFYNVLVEGDDLDEPITDAVRGILDGHI 349

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LA  G +P +D   S+SR+ ++  S   KK       +   + E +++ +IGGY 
Sbjct: 350 VLSRDLANRGHFPAIDINKSISRIMNEVVSNMHKKAAREFLKMSADYNEVKELIMIGGYA 409

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            G    +D+A+   P++  +L+Q   +LSS
Sbjct: 410 KGSMPEVDRAIEYKPLMDRYLQQDMYELSS 439


>gi|302878296|ref|YP_003846860.1| flagellar protein export ATPase FliI [Gallionella capsiferriformans
           ES-2]
 gi|302581085|gb|ADL55096.1| flagellar protein export ATPase FliI [Gallionella capsiferriformans
           ES-2]
          Length = 500

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 143/318 (44%), Positives = 199/318 (62%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  GKP+D    L +   S  + S+    + R  ++     G+R I+    +  GQ
Sbjct: 161 GRVLDGAGKPLDQLGPLLE-TASAPLQSRPFNPLERASIDTPLDVGVRAINALLSVGRGQ 219

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D  ++ L+GERGREV+EFI D LG + + +SVVV 
Sbjct: 220 RMGLFAGSGVGKSVLLGMMARYTSADVTVVGLIGERGREVKEFINDILGPEGMARSVVVA 279

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +D SP++R      A TIAEYF  +G NVLLI+DS+TRFA + REIA   GE P  +G
Sbjct: 280 TPADTSPLMRLQGTAYATTIAEYFRDQGKNVLLIMDSLTRFAMAQREIALAVGEPPATKG 339

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP+L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 340 YPPSVFAKLPQLVERAGNGLEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 399

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L E+G YP +D  AS+SR+  +  + +   LV     L   ++  RD+  +G Y  G D 
Sbjct: 400 LVEQGHYPAIDIEASISRVMSRLATPEHAALVQRFKQLYAHYQRNRDLISVGAYINGSDP 459

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD+A+   P +  FLKQ
Sbjct: 460 LLDEAIKLYPKMEQFLKQ 477


>gi|125972989|ref|YP_001036899.1| flagellar protein export ATPase FliI [Clostridium thermocellum ATCC
           27405]
 gi|256004786|ref|ZP_05429761.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 2360]
 gi|281417200|ref|ZP_06248220.1| flagellar protein export ATPase FliI [Clostridium thermocellum
           JW20]
 gi|125713214|gb|ABN51706.1| type III secretion system ATPase, FliI/YscN [Clostridium
           thermocellum ATCC 27405]
 gi|255991236|gb|EEU01343.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 2360]
 gi|281408602|gb|EFB38860.1| flagellar protein export ATPase FliI [Clostridium thermocellum
           JW20]
 gi|316940775|gb|ADU74809.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 1313]
          Length = 437

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 212/325 (65%), Gaps = 12/325 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GRVI+ +G+PIDG     KG++  E    + +K P  + R R+++    G++ ID  
Sbjct: 100 ALIGRVIDGMGRPIDG-----KGEIVTETTYPVENKPPHPLKRNRIKEPLPLGVKTIDGL 154

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNL 214
             +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+L+GERGREVREFIE D   + L
Sbjct: 155 LTVGKGQRVGIFAGSGVGKSTLIGMIARNTKADVNVIALIGERGREVREFIEKDLKEEGL 214

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+SVVVVATSD+  ++R    L A  IAEYF  +G +VLL++DS+TRFA + REI  + G
Sbjct: 215 KRSVVVVATSDQPALIRLKGALMATAIAEYFRDQGKDVLLLMDSLTRFAMAQREIGLSIG 274

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E PV+RGY  SVFS +P+LLER G S  + G+IT + +VLVDGD+  +P+ D+ R ILDG
Sbjct: 275 EPPVSRGYTPSVFSIMPKLLERAGNS--QSGSITGLYTVLVDGDDLTEPVTDTARGILDG 332

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+R+LA + +YP +D LASVSR+       + +K+ + +   +  + E  D+  +G 
Sbjct: 333 HIVLSRNLANKNQYPAIDVLASVSRVMPDIVDDEHQKIANDIKKTMAIYREAEDLINVGA 392

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G +  +D A+  +  I +F+KQ
Sbjct: 393 YAKGSNEKIDYAIEVIDKIQEFIKQ 417


>gi|302387793|ref|YP_003823615.1| ATPase, FliI/YscN family [Clostridium saccharolyticum WM1]
 gi|302198421|gb|ADL05992.1| ATPase, FliI/YscN family [Clostridium saccharolyticum WM1]
          Length = 433

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 152/350 (43%), Positives = 223/350 (63%), Gaps = 11/350 (3%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP--PAMNRQRVEKGFKTGI 149
           R +I       GR+I+A G+P+DG    G  D S     + P    + R  +    + G+
Sbjct: 88  RLKIPVGDFLRGRIIDAKGEPMDGK---GPFDSSRYYYVENPYINPLTRPPITDRLEFGV 144

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           + ID    +  GQRIG+FAGSG+GKSTLL M AR+   D  +++LVGERGREVREFIE  
Sbjct: 145 KAIDGMNTIGKGQRIGIFAGSGVGKSTLLGMIARNVKADINVVALVGERGREVREFIEKD 204

Query: 210 LG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG + +++SV+VVATSD+  +LR   PL A TIAEYF ++G +VLL++DS+TRFA + RE
Sbjct: 205 LGPEGMERSVLVVATSDQPAMLRMKCPLVATTIAEYFKNQGKDVLLMMDSLTRFAMAQRE 264

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I    GE PVARGY  S+++E P+LLER G     +G+IT + +VLV+GD+ N+PIAD+V
Sbjct: 265 IGLAIGEPPVARGYTPSIYAEFPKLLERSG--NFGEGSITGIYTVLVEGDDTNEPIADTV 322

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R I+DGHIVL+R LA    +P +D  AS+SRL     S + ++L S +  ++  +E+  D
Sbjct: 323 RGIVDGHIVLSRKLANANHFPAIDVSASISRLMTNIVSEEHRRLASEIRDILSIYEKNED 382

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  IG Y+ G +  LD+A+ ++  +  FL Q    +   D +++I  K++
Sbjct: 383 LISIGAYKSGTNPKLDQAIARIDKVNQFLCQG---IQENDSYEDILVKMK 429


>gi|315648135|ref|ZP_07901236.1| flagellar protein export ATPase FliI [Paenibacillus vortex V453]
 gi|315276781|gb|EFU40124.1| flagellar protein export ATPase FliI [Paenibacillus vortex V453]
          Length = 439

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 153/366 (41%), Positives = 230/366 (62%), Gaps = 7/366 (1%)

Query: 70  VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    I  G D+V       +   +   G+V++ LG+P+DG  S+    +    
Sbjct: 69  VLLMPLGELHSIGPGCDVVGTGKPLSVQVGSELLGKVLDGLGQPLDG--SIIPARMPHYS 126

Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
              VP   +NR RV++    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   
Sbjct: 127 THNVPQNPLNRPRVQEPISIGVRAIDGLLSIGKGQRVGIFAGSGVGKSTLMGMIARNTSA 186

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREV +FIE  LG + LK+SVV+VATSD+  ++R    L A TIAEYF 
Sbjct: 187 DVNVIALIGERGREVLDFIERDLGPEGLKRSVVIVATSDQPALIRIKGALIATTIAEYFR 246

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G NV+L++DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G      G+
Sbjct: 247 DRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GS 304

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VLVDGD+ N+PIAD+VR ILDGHIVLNR++A +G +P +D LAS+SR+      
Sbjct: 305 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRNIANKGHFPAIDVLASISRVMKDISP 364

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            ++     ++  L+  ++++ D+  IG Y+ G +  +D+++  +  I+DF KQ  ++ ++
Sbjct: 365 EEQIDASENVKRLMAVYKDSEDLINIGAYQEGSNADIDESIEYIGRIWDFTKQKVNEKTT 424

Query: 427 EDVFQE 432
            +  QE
Sbjct: 425 LNEVQE 430


>gi|319944165|ref|ZP_08018441.1| flagellar protein export ATPase FliI [Lautropia mirabilis ATCC
           51599]
 gi|319742460|gb|EFV94871.1| flagellar protein export ATPase FliI [Lautropia mirabilis ATCC
           51599]
          Length = 475

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 145/325 (44%), Positives = 206/325 (63%), Gaps = 2/325 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+D    L +   S  I  +   AM+R+ + +   TG+R I+    +  GQ
Sbjct: 127 GRVVDADGRPMDRFGPL-RNVESRPIHGRAINAMDREPIREALDTGVRAINGLLTIGRGQ 185

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           RIG+FAG+G+GKS LL M AR    D +++ LVGERGRE++EF+ED LG+ +  ++V+V 
Sbjct: 186 RIGLFAGAGLGKSVLLGMMARYTNADVIVVGLVGERGREIKEFLEDILGEEDRHRAVIVA 245

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A SD  PI R      A  IAEYF  +  NVLL++DS+TR+A + REIA + GE P  +G
Sbjct: 246 APSDLPPIARMQGAHYATAIAEYFRDQDMNVLLLMDSLTRYAMAAREIALSIGESPATKG 305

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP LLER G   + +G+ITA  +VL +GD+ NDP+ADS RS LDGHIVL+R 
Sbjct: 306 YPPSVFARLPALLERTGMGARGQGSITAFYTVLAEGDDQNDPVADSSRSFLDGHIVLSRE 365

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D   S+SR+      A++++L   L  L   +  +R++  IG Y  G D 
Sbjct: 366 LADAGHYPAIDIEKSISRVMSAVTPAEQQQLARQLKSLWSAYRRSRELITIGAYTEGSDA 425

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
            +D+A+  +P+I  FL Q   D SS
Sbjct: 426 RIDRAIELMPMIEAFLCQEVHDPSS 450


>gi|330502766|ref|YP_004379635.1| flagellum-specific ATP synthase [Pseudomonas mendocina NK-01]
 gi|328917052|gb|AEB57883.1| flagellum-specific ATP synthase [Pseudomonas mendocina NK-01]
          Length = 448

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 148/362 (40%), Positives = 222/362 (61%), Gaps = 5/362 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  +   +Y+ PVG    I+ G  V       R+       GRV++  G+ +DG   +
Sbjct: 68  EVMGFSAGKIYLMPVGSLAGIAPGARVVPLPDAGRLPMGMTMLGRVLDGAGRALDGKGGM 127

Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              D + M+  S  P  +NR  + +    GIR I+    +  GQR+G+FAG+G+GKS LL
Sbjct: 128 KAEDWVPMDGPSINP--LNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLL 185

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLT 237
            M  R    + +++ L+GERGREV+EFI++ LG+  LK+SVVV + +D++P++R  A   
Sbjct: 186 GMMTRFTEAEIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQY 245

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              IAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER 
Sbjct: 246 CTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERA 305

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G +E   G+ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG YP VD  +S+
Sbjct: 306 GNAEAGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAVDIESSI 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +    ++ K       L  R++++RD+  +G Y PG D   D A+ + PI+  +L
Sbjct: 366 SRVMPQVVPPEQLKQAQRFKQLWSRYQQSRDLISVGAYVPGGDADTDLAIARQPIMAQYL 425

Query: 418 KQ 419
           +Q
Sbjct: 426 RQ 427


>gi|119775429|ref|YP_928169.1| flagellum-specific ATP synthase [Shewanella amazonensis SB2B]
 gi|119767929|gb|ABM00500.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B]
          Length = 446

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 161/421 (38%), Positives = 238/421 (56%), Gaps = 5/421 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  L QL +    N  V  G +  +  V  T+        +G          + + +V+ 
Sbjct: 9   LNNLRQLRQSLPVNRPVAEGQLVRV--VGLTLEASGCRAPVGSLCAIDTMGGELIAEVVG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + D++Y+ P+   + +  G  V   G +  I       GRV++  G+P+DG   LG  D
Sbjct: 67  FDEDLLYLMPIEELKGVLPGARVRPLGEQTGIHVGMSLLGRVLDGGGEPLDGLGPLGTTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++      + P + R+ + +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 127 IAPRHGPAINP-LARRPIHEPLDVGIRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADVIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER G    
Sbjct: 246 EYFRDLGFNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGP 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRTLADSGHYPAIDIEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S    + +  +      +++ RD+  IG Y  G D  +D A+   P +  FL+Q   
Sbjct: 366 MVISPAHLEAMRRVKQTYSLYQQNRDLISIGAYAAGSDPRIDNAIRLQPAMNAFLRQGMR 425

Query: 423 D 423
           D
Sbjct: 426 D 426


>gi|300854211|ref|YP_003779195.1| flagellum-specific ATP synthase [Clostridium ljungdahlii DSM 13528]
 gi|300434326|gb|ADK14093.1| flagellum-specific ATP synthase [Clostridium ljungdahlii DSM 13528]
          Length = 435

 Score =  272 bits (696), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 163/392 (41%), Positives = 238/392 (60%), Gaps = 7/392 (1%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINA 108
           ++  +NS    +V+  N   V + P+G    IS G  +V       +  S    G+V++ 
Sbjct: 48  IYNEENSKISCEVVGFNESNVILMPLGELIGISPGCRVVPERMPLNVRCSDELFGKVLDG 107

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG P+DG  +     +   + ++ P  + R+R+ +   TG+R ID F     GQRIG+FA
Sbjct: 108 LGNPLDG--AYISSGVPYPLDTEPPDPLKRRRITEVIATGVRAIDGFLTCGQGQRIGIFA 165

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKST L M A+    D  +I+L+GERGREV++FIE  LG+  +KKS++V ATSD+ 
Sbjct: 166 GSGVGKSTTLGMIAKYAEADVNVIALIGERGREVKDFIEKDLGEEGMKKSIIVCATSDKP 225

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            ++R     TA  IAEYF  KG  V+L++DS+TRFA + REI    GE P  +GY  SVF
Sbjct: 226 ALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVF 285

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++LPRL+ER G S+   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  
Sbjct: 286 AKLPRLMERAGTSDI--GSITAFYTVLVDGDDLNEPIADAVRGILDGHIVLSRTLANKNH 343

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SRL  +   +D KK  S    ++  ++ + D+  IG Y  G    +DKAV
Sbjct: 344 YPAIDVLASISRLMSEIAESDHKKNASFARDMLSTYKNSEDLINIGAYVKGSSEKIDKAV 403

Query: 408 HQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
                I  +L+Q  ++ SS E+  +++ K  Q
Sbjct: 404 ACYDKIIAYLRQDVNENSSFEESVEDLKKIFQ 435


>gi|50954407|ref|YP_061695.1| flagellum-like ATP synthase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950889|gb|AAT88590.1| flagellum-like ATP synthase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 441

 Score =  272 bits (696), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 168/418 (40%), Positives = 242/418 (57%), Gaps = 20/418 (4%)

Query: 12  AEDYSKNLVVQG----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           A+ Y+  L V      G ++S   +  TV  L   V  GD V      S    Q++ +  
Sbjct: 8   ADRYAAALRVAAPERVGAVTSAVGLSLTVAGLRGAV--GDLVEIGEPGSVTHAQIVAVGP 65

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-----WCGRVINALGKPIDGDDSLGKG 122
           ++  + P+      S G       RF + P          GRVIN LG PIDG   L   
Sbjct: 66  EMTCM-PMTPAAGHSTG----AGARFALRPPTVPTGRGLLGRVINGLGHPIDGKGPL-DA 119

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              + + + VP  ++R R++     G+R +D   P+  GQR+G+FAGSG+GKS+LLSM A
Sbjct: 120 TSCLPLDNAVPNPLDRARIDTPLPLGVRALDTLIPVGRGQRLGLFAGSGVGKSSLLSMIA 179

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D  +++L+GERGREVREF+ED LG D L +SVVVVATSDE  ++R+ A   A  I
Sbjct: 180 RGTDADVFVLALIGERGREVREFLEDDLGADGLARSVVVVATSDEPALMRRRAAFAATRI 239

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F   G + +L++DS+TR A + REI  ++GE P  RGYP+S FS L  LLER G ++
Sbjct: 240 AESFRDNGADAMLMMDSLTRVAMAQREIGLSAGEPPATRGYPSSTFSTLASLLERAGTAK 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+IT + +VLVDGD+HN+PIAD+ RSILDGH++L+R LA  G +P +D L S+SRLA
Sbjct: 300 T--GSITGLYTVLVDGDDHNEPIADAARSILDGHVLLDRKLAINGHFPSIDVLGSISRLA 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            K  +  ++   ++L  ++      +D+  +G Y+PG + ++D  V     I  FL+Q
Sbjct: 358 GKICTPGQQAAATALRKVMAARRAAQDLLDVGAYKPGANPLVDAGVEHEDRIAAFLQQ 415


>gi|331645405|ref|ZP_08346509.1| flagellar protein export ATPase FliI [Escherichia coli M605]
 gi|331045567|gb|EGI17693.1| flagellar protein export ATPase FliI [Escherichia coli M605]
          Length = 446

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQAKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++    + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTRLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|219684590|ref|ZP_03539533.1| flagellar protein export ATPase FliI [Borrelia garinii PBr]
 gi|219671952|gb|EED29006.1| flagellar protein export ATPase FliI [Borrelia garinii PBr]
          Length = 436

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 159/405 (39%), Positives = 245/405 (60%), Gaps = 9/405 (2%)

Query: 36  VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  ++ Q  N     +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAVGDLCLIDQRNNKRVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   S  K         K+ P +NR   E+   TG++V+D
Sbjct: 92  EINLSDELLGRVIDSLGRPIDNKGSFLKNRYKELTFEKINP-INRSIFEEQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PV++GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+AD+++++L
Sbjct: 271 LGEPPVSKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L + G YP ++ L+S SR  ++  S +++KL+    +L+  ++   D+   
Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSINRIMSLEKQKLIMKARNLLSIYKNYEDLIRT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL----SSEDVFQEI 433
           G Y  G +  +D A+ + P I DF+ Q  +++    + ED  +EI
Sbjct: 390 GIYIKGSNKDVDFAISKYPKIIDFISQGINEIYDFENLEDEIREI 434


>gi|33593244|ref|NP_880888.1| type III secretion system ATPase [Bordetella pertussis Tohama I]
 gi|29603230|emb|CAC79575.1| bscN [Bordetella pertussis Tohama I]
 gi|33563619|emb|CAE42520.1| putative ATP synthase in type III secretion system [Bordetella
           pertussis Tohama I]
 gi|332382653|gb|AEE67500.1| type III secretion system ATPase [Bordetella pertussis CS]
          Length = 444

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 157/410 (38%), Positives = 236/410 (57%), Gaps = 16/410 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
            L ++G  +  + ++   V  + +   VCL   + + G++ +  G+V+    D   + P+
Sbjct: 20  TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130
           G    IS    V   GR  + P      GRV++ LG+P+D  +S   G L       + +
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDAAES---GPLHAHKFYPVFA 133

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +++L+GERGREVREF+E  LG +  +KSV+V ATSD+S + R  A   A  IAEYF  +G
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL ++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G ++   G+ITA
Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   
Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           K L   +  L+ ++++   +  IG Y+ G D   D+A+ ++  I  FL+Q
Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQ 421


>gi|260866402|ref|YP_003232804.1| putative lateral flagellum-specific ATP synthase [Escherichia coli
           O111:H- str. 11128]
 gi|257762758|dbj|BAI34253.1| predicted lateral flagellum-specific ATP synthase [Escherichia coli
           O111:H- str. 11128]
 gi|323178505|gb|EFZ64083.1| flagellum-specific ATP synthase [Escherichia coli 1180]
          Length = 445

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++D +TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDFLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|54294644|ref|YP_127059.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Lens]
 gi|53754476|emb|CAH15960.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Lens]
          Length = 449

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 151/362 (41%), Positives = 225/362 (62%), Gaps = 3/362 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + VY+  +G  + I+ G  +   GR  +++      GR++N  G  ID D   
Sbjct: 63  EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVNVGHQLLGRILNGSGMFID-DGPP 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G+   +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL 
Sbjct: 122 GEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIE  LG + LK++VVV A +DESP++R      A
Sbjct: 182 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLKRAVVVAAPADESPLMRLHGAKVA 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G
Sbjct: 242 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+S
Sbjct: 302 NGTAGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L 
Sbjct: 362 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 421

Query: 419 QS 420
           Q 
Sbjct: 422 QG 423


>gi|209522226|ref|ZP_03270862.1| flagellar protein export ATPase FliI [Burkholderia sp. H160]
 gi|209497340|gb|EDZ97559.1| flagellar protein export ATPase FliI [Burkholderia sp. H160]
          Length = 546

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 142/318 (44%), Positives = 201/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+DG   LG   +   + + V   +NR+ + K    G+R I+    +  GQ
Sbjct: 210 GRVLDASGRPLDGLGPLGT-QIDAPLSAPVINPLNREPIHKVLDVGVRAINSLLTVGRGQ 268

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVV+ 
Sbjct: 269 RMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVIA 328

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +G
Sbjct: 329 APADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKG 388

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RS
Sbjct: 389 YPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 448

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +          ++ R++  RD+  +G Y  G D 
Sbjct: 449 LAEAGHYPAIDIEASISRAMTALIDDNHLNKTRMFKQMLSRYQRNRDLINVGAYSSGRDA 508

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD+A+   P +  FL+Q
Sbjct: 509 VLDRAIALYPRMEAFLQQ 526


>gi|325918314|ref|ZP_08180451.1| ATPase FliI/YscN family [Xanthomonas vesicatoria ATCC 35937]
 gi|325535454|gb|EGD07313.1| ATPase FliI/YscN family [Xanthomonas vesicatoria ATCC 35937]
          Length = 458

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 145/323 (44%), Positives = 207/323 (64%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   + G+G +SM  MS  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRGEGSVSMAGMSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD+ W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADEPW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435


>gi|313683644|ref|YP_004061382.1| ATPase, flii/yscn family [Sulfuricurvum kujiense DSM 16994]
 gi|313156504|gb|ADR35182.1| ATPase, FliI/YscN family [Sulfuricurvum kujiense DSM 16994]
          Length = 434

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 163/421 (38%), Positives = 238/421 (56%), Gaps = 18/421 (4%)

Query: 29  ITSVYYTVTCLSQ--------YVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +T+V+ TV+ +S         +V +GD V  V +   ++ LG V  +  +  +I P    
Sbjct: 15  LTTVFGTVSKISPTVIVAEGLHVSIGDTVLMVSETSGAEALGMVSEVERNRFFITPFRFV 74

Query: 79  EEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAM 136
           E    GD V+ +     I       GRV++    PIDG   +       E + K P  AM
Sbjct: 75  EGFRAGDKVYPNQSGMMIEVGEALLGRVVDPFMNPIDGKGPIAGSHF--ESIIKAPIAAM 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +++L+G
Sbjct: 133 KRGMIDEPFSVGVKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGADAPIKVVALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGREV EFIE  LG NL+ +V+VVATSD+SP++RK    +A+++AEYF  KG +VL ++
Sbjct: 193 ERGREVPEFIEKSLGGNLENTVLVVATSDDSPLMRKYGAFSAMSVAEYFKGKGQDVLFMM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E+  G+ITA  +VLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGSGSITAFFTVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP+  L S SR+ +   + +    V   
Sbjct: 312 GDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPIHILNSASRVMNDIITPEHLAAVRRF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L    +E   +  IG Y  G D  LD+A+ +   +  FL Q    +S    +QE   +
Sbjct: 372 RRLYTLLKENEMLIRIGAYVRGTDRELDEAISKKEKMEAFLSQEAMSISG---YQESIDQ 428

Query: 437 L 437
           L
Sbjct: 429 L 429


>gi|107101129|ref|ZP_01365047.1| hypothetical protein PaerPA_01002161 [Pseudomonas aeruginosa PACS2]
          Length = 429

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 146/336 (43%), Positives = 209/336 (62%), Gaps = 4/336 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R++      G+V++ LG+P DG     +      +    PP M+R+ +E+    G+R
Sbjct: 83  GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPPPMSRRLIERPLSLGVR 141

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGREVREFIE  L
Sbjct: 142 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 201

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI
Sbjct: 202 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF+ LPRL+ER G SE+  G+ITA+ +VLV+GD+ ++P+AD  R
Sbjct: 262 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 319

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   + ++EE   +
Sbjct: 320 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 379

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             IG Y+ G D   D+A+ ++  I  +L+Q   + S
Sbjct: 380 LKIGEYQKGQDSEADRAIEKIAAIRQWLRQGTHETS 415


>gi|323703172|ref|ZP_08114825.1| flagellar protein export ATPase FliI [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531831|gb|EGB21717.1| flagellar protein export ATPase FliI [Desulfotomaculum nigrificans
           DSM 574]
          Length = 443

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 153/357 (42%), Positives = 216/357 (60%), Gaps = 5/357 (1%)

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+G    I  G  V   GR   +       G+V++ LG+P++GD   G+ +    + +
Sbjct: 74  LMPLGELRGIYPGSAVVPSGRTLTVKVGEHLRGKVLDGLGRPLEGDIHNGQAE-DFPVDN 132

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  + R+R++    TG+R +D       GQRIG+FAGSG+GKSTLL M AR    D  
Sbjct: 133 RPPNPLKRKRIDTVLPTGVRAVDALLTCGKGQRIGIFAGSGVGKSTLLGMIARHGGADVN 192

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I L+GERGREV EF+E+ LG + + KS+VV ATSD+  ++R      A  IAEYF  +G
Sbjct: 193 VIGLIGERGREVLEFLEEDLGPEGMAKSIVVAATSDQPALVRLKGAFVATAIAEYFRDRG 252

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LP+LLER G  +   G+ITA
Sbjct: 253 LDVMLMMDSVTRFAMAQREVGLAVGEPPATKGYTPSVFALLPKLLERSGMGQN--GSITA 310

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VLVDGD+ N+PIAD+VR ILDGHIVLNRSLA    YP +D L SVSRL     S + 
Sbjct: 311 FYTVLVDGDDLNEPIADAVRGILDGHIVLNRSLASRNHYPAIDVLQSVSRLMPDIVSEEH 370

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           K     +  L+  + +  D+  IG Y  G +  +D A+ +   I +FL+Q P + SS
Sbjct: 371 KAQAGMVKDLLAAYLQAEDLINIGAYVKGSNPKIDAAIAKYDGIINFLRQQPGEFSS 427


>gi|254457549|ref|ZP_05070977.1| flagellum-specific ATP synthase [Campylobacterales bacterium GD 1]
 gi|207086341|gb|EDZ63625.1| flagellum-specific ATP synthase [Campylobacterales bacterium GD 1]
          Length = 438

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 161/424 (37%), Positives = 238/424 (56%), Gaps = 10/424 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73
           SKN  V  G +  I +   T   LS  V + D V  +      + +G V  I+    +I 
Sbjct: 12  SKNYSVAFGEVIKINATIITAKGLS--VSISDMVKIISNSTAQETMGMVTEIDGATFFIT 69

Query: 74  PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P    E    GD VF       I       GRV++   +PID   ++    + M  + K 
Sbjct: 70  PFSFVEGFCSGDRVFLDQTGMNIPVGQALLGRVVDPFMRPIDEKGTISS--IKMSPIIKA 127

Query: 133 P-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  +       +
Sbjct: 128 PIAAMKRGMIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKGSTAPIKV 187

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           ++L+GERGREV EFIE  LG +L+ +V++VATSD+SP++RK     A+++AEYF  +G +
Sbjct: 188 VALIGERGREVPEFIEKNLGGDLENTVIIVATSDDSPLMRKYGAFAAMSVAEYFKDQGLD 247

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E  KG+ITA  
Sbjct: 248 VLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEDGKGSITAFF 306

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++GD+ +DPIAD  RSILDGHIVL+R L + G YPP+  L S SR+ +   S +  +
Sbjct: 307 TVLIEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPIHILNSASRVMNDIISKEHLQ 366

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVF 430
           +V     L    +E   +  IG Y  G D  LD+A+++   +  F+ Q  +   + +D  
Sbjct: 367 MVMKFRRLYTLLKENEMLIRIGAYVKGTDSELDEAMNKKEGMEKFMSQDANMQTNYQDTL 426

Query: 431 QEIT 434
            E+T
Sbjct: 427 DELT 430


>gi|219685772|ref|ZP_03540583.1| flagellar protein export ATPase FliI [Borrelia garinii Far04]
 gi|219672711|gb|EED29739.1| flagellar protein export ATPase FliI [Borrelia garinii Far04]
          Length = 436

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/405 (39%), Positives = 245/405 (60%), Gaps = 9/405 (2%)

Query: 36  VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  ++ Q  N     +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAVGDLCLIDQRNNKRVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   S  K         K+ P +NR   E+   TG++V+D
Sbjct: 92  EINLSDELLGRVIDSLGRPIDNKGSFLKNRYKELTFEKINP-INRSIFEEQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PV++GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+AD+++++L
Sbjct: 271 LGEPPVSKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L + G YP ++ L+S SR  ++  S +++KL+    +L+  ++   D+   
Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSINRIMSLEKQKLIMKARNLLSIYKNYEDLIRA 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL----SSEDVFQEI 433
           G Y  G +  +D A+ + P I DF+ Q  +++    + ED  +EI
Sbjct: 390 GIYIKGSNKDVDFAISKYPKIIDFISQGINEIFDFENLEDEIREI 434


>gi|224531735|ref|ZP_03672367.1| flagellar protein export ATPase FliI [Borrelia valaisiana VS116]
 gi|224511200|gb|EEF81606.1| flagellar protein export ATPase FliI [Borrelia valaisiana VS116]
          Length = 436

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/387 (39%), Positives = 236/387 (60%), Gaps = 5/387 (1%)

Query: 36  VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  ++ Q  N     +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAVGDLCLIDQRNNKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   +         I  K+ P +NR   E+   TG++V+D
Sbjct: 92  EINLSDELLGRVIDSLGRPIDNKGAFLNNRYKELIFEKINP-INRSIFEEQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+G+G+GKSTLL+M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLAMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+ D+++++L
Sbjct: 271 LGEPPVAKGYPPSVFFEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVVDNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    +L+  +++  D+   
Sbjct: 330 DGHIILDRDLFDRGIYPSINVLSSTSRSVHRIMSLEKQKLIMKARNLLSVYKDYEDLVRT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           G Y  G +  +D A+ + P I DF+ Q
Sbjct: 390 GIYLKGSNKDVDFAISKYPKIIDFISQ 416


>gi|302874592|ref|YP_003843225.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Clostridium cellulovorans 743B]
 gi|307690797|ref|ZP_07633243.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Clostridium cellulovorans 743B]
 gi|302577449|gb|ADL51461.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Clostridium cellulovorans 743B]
          Length = 435

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 161/399 (40%), Positives = 241/399 (60%), Gaps = 11/399 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACW 101
           VCL    ++  +  +   +V+    D + + P+G    I+ G  V   G    ++ S   
Sbjct: 45  VCL----IYNTQGKEIHCEVVGFKSDDIILMPLGELVGIAPGCRVVATGIPLSVNCSYDL 100

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G++I+ LG+P+D   S+ +G++   + +  P  + R+R+++   TG+R ID F     G
Sbjct: 101 LGKIIDGLGRPLD-KSSIPQGEM-YPLDTNPPDPLKRRRIKEILPTGVRAIDGFLTCGEG 158

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           QR+G+FAGSG+GKSTLL M AR    D  +I+L+GERGREV +FIE  LG+  +K+S+VV
Sbjct: 159 QRVGIFAGSGVGKSTLLGMIAREAQADINVIALIGERGREVLDFIEKDLGEEGMKRSIVV 218

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            ATSD+  ++R     TA  IAEYF  +G  V+L++DS+TRFA + RE+    GE P  +
Sbjct: 219 CATSDQPALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVGLAVGEPPATK 278

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  SVF+ LP+L+ER G SEK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R
Sbjct: 279 GYTPSVFAMLPKLMERSGMSEK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LA +  +P +D L+S+SRL  +    + KK  S    L+  ++ + D+  IG Y  G +
Sbjct: 337 ALAAQNHFPAIDVLSSISRLMSEIAEEEHKKSASLARDLLATYKNSEDLINIGAYVSGSN 396

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
             +D A+     I  FLKQ   + S+ ED    + K  +
Sbjct: 397 KKIDMAIFHNEKINLFLKQQVKEKSAFEDSIDNLKKMFK 435


>gi|28898442|ref|NP_798047.1| type III secretion system ATPase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365114|ref|ZP_05777685.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus K5030]
 gi|260876603|ref|ZP_05888958.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AN-5034]
 gi|260895036|ref|ZP_05903532.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus Peru-466]
 gi|28806659|dbj|BAC59931.1| ATP synthase in type III secretion system [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308085935|gb|EFO35630.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus Peru-466]
 gi|308093577|gb|EFO43272.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AN-5034]
 gi|308111730|gb|EFO49270.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus K5030]
          Length = 440

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG D + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    D +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PSDL
Sbjct: 371 AYAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDL 427


>gi|194292003|ref|YP_002007910.1| sctn: non flagellar t3S system conserved protein. atpase alpha/beta
           chains family [Cupriavidus taiwanensis LMG 19424]
 gi|193225907|emb|CAQ71854.1| SctN: non flagellar T3S system conserved protein. ATPase alpha/beta
           chains family [Cupriavidus taiwanensis LMG 19424]
          Length = 460

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 172/416 (41%), Positives = 241/416 (57%), Gaps = 16/416 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS- 82
           G + + T +   V  L Q V  G+  +        L +V+        + P+G    +S 
Sbjct: 42  GMLINATGIQAHVGELCQLVTPGEPPL--------LAEVVGFVQQTALLTPLGRTTGVSA 93

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           L +++      +    A   GRV++ALG+PIDG  +L  G   + + ++ P  + R+ + 
Sbjct: 94  LTEVIPSAHGHQCPAGAALLGRVLDALGEPIDGKGAL-DGVARVPVDNEPPDPLTRRLIR 152

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TG+R ID    L  GQR+G+FA  G+GKSTLL M AR    D  +++LVGERGREV
Sbjct: 153 EPLATGVRAIDGLLTLGEGQRVGIFAPPGVGKSTLLGMLARGASSDVNVVALVGERGREV 212

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFIE  LG D + ++V+VV+TSD SP+ R     TA  IAE+F  +G  VLL++DS+TR
Sbjct: 213 REFIEYNLGSDGMARTVLVVSTSDRSPMERVRCAYTATAIAEHFRDQGRRVLLLVDSLTR 272

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
            A + REI   SGE P  R YP SVFS LP+LLER G     +G+ITA  +VL +G++ +
Sbjct: 273 LARAQREIGLASGEPPTRRSYPPSVFSMLPQLLERAG--TGVQGSITAAYTVLTEGEDDS 330

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIA+ VRSILDGHIVL+R LA  G+YPPVD L SVSR+  +  +    +  + L  L+ 
Sbjct: 331 DPIAEEVRSILDGHIVLSRKLASAGQYPPVDVLQSVSRVMPQVVAGAHARDAARLRQLLA 390

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           R++E   +  IG YRPG D + D AV  +P I  +L Q  + L   D F     KL
Sbjct: 391 RYQELELLLQIGEYRPGADPVADAAVAAMPDIRAYLAQPAARL---DTFAGAVDKL 443


>gi|254176456|ref|ZP_04883114.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           ATCC 10399]
 gi|160697498|gb|EDP87468.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           ATCC 10399]
          Length = 442

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 168/431 (38%), Positives = 245/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFAH+ REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFAHAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|255021376|ref|ZP_05293424.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
 gi|254969239|gb|EET26753.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
          Length = 460

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 209/330 (63%), Gaps = 2/330 (0%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  + S S    GRVI+ LG+P+DG D++      + +M      MNR  +      G+R
Sbjct: 101 GEAQGSASPALLGRVIDGLGQPLDGGDAV-PNRTPIPLMGTPLNPMNRMPIRHPLDVGVR 159

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  G R+G+FAGSG+GKS LL M AR+   D +++ L+GERGREV+EFIED L
Sbjct: 160 SINALFTVGRGARMGLFAGSGVGKSVLLGMMARNTEADVIVVGLIGERGREVKEFIEDIL 219

Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L+++VVV A +D   + R      A  +AEYF  +G +VLL++DS+TR+A + REI
Sbjct: 220 GEAGLRRAVVVAAPADAPALTRIRGAHLATALAEYFRDRGQHVLLLMDSLTRYAMAQREI 279

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  RGYP SVF+ LP L+ER G   ++ G+ITA  +VL++GD+  DPIADS R
Sbjct: 280 ALAVGEPPAVRGYPPSVFARLPALVERAGNGGRDGGSITAFYTVLMEGDDQQDPIADSAR 339

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGH+VL+RSLAE+G YP +D  AS+SR+      A + + +  L  L  R+ E RD+
Sbjct: 340 AILDGHLVLSRSLAEQGHYPAIDLEASISRVMPNIVPAAQLQALHRLKRLYGRYREQRDL 399

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             +G Y  G+D +LD+AV   P I  FL+Q
Sbjct: 400 IAVGAYSAGLDPVLDQAVQAYPAIEAFLQQ 429


>gi|255507276|ref|ZP_05382915.1| type III secretion system ATPase [Chlamydia trachomatis D(s)2923]
          Length = 442

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118
           +V+    + V++ P+G    +S    V   G    I       GRV+N LG PID +   
Sbjct: 61  EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120

Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D    I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+L
Sbjct: 121 PLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAEGQRIGIFAGAGVGKSSL 180

Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L M AR ++  D  +I+L+GERGREVREFIE+ LG+  +K+SV+VV+TSD+S  LR  A 
Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLE
Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LA
Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +  
Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FLKQ   D+  +  ++E  ++L+
Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438


>gi|74055037|gb|AAZ95842.1| FliI [Aeromonas hydrophila]
          Length = 443

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 202/320 (63%), Gaps = 2/320 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+ +G+P+DG   +           ++ P ++R+ + +    G+R I+    +  
Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFIED LG+  + +SVV
Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEDILGEEGRARSVV 219

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR+A + REIA   GE P  
Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+
Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA+ G YP +D   S+SR+     S    +L  +L      +++ RD+  IG Y  G 
Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPQHMELARTLKQFYSLYQQNRDLITIGAYSQGS 399

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D  +D+A+ Q P +  FL+Q
Sbjct: 400 DPRIDRAIVQKPYLDQFLQQ 419


>gi|206890201|ref|YP_002248118.1| flagellar protein export ATPase FliI [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742139|gb|ACI21196.1| flagellar protein export ATPase FliI [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 437

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/336 (45%), Positives = 206/336 (61%), Gaps = 6/336 (1%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+I+  G PIDG  SL KG     I  +V   + R+ +++    GIR I+       G
Sbjct: 102 LGRIIDGTGNPIDGGVSL-KGK-PFPIYKEVINPLEREIIKEPLDLGIRAINALITCGKG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
           Q+IG+ AGSG+GKS LL M AR    D  +I+L+GERGREVREFIE+ L D LKKSVVVV
Sbjct: 160 QKIGIMAGSGVGKSVLLGMIARYTSADINVIALIGERGREVREFIENDLADGLKKSVVVV 219

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +TSD   + R      A  IAEYF  +G +VLL++DS+TRFA + REI   +GE P  +G
Sbjct: 220 STSDAPALARIRGAFLATAIAEYFREQGKHVLLLMDSLTRFAMAQREIGLAAGEPPTMKG 279

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ +P+LLER+G   K  G+IT + +VLV+GD+  DP+AD+ R+ILDGHIVL+R 
Sbjct: 280 YPPSVFNLMPKLLERVGVI-KNGGSITGIYTVLVEGDDLTDPVADASRAILDGHIVLSRE 338

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +DPL S+SRL          K    L  +I  +    DI  IG Y+ G + 
Sbjct: 339 LANRNHYPAIDPLKSISRLMKDIVDDKHLKYAGRLLDIIATYARYEDIINIGAYKEGTNA 398

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +D A+  +  I  FLKQ   D+S +  F+E  +KL
Sbjct: 399 QVDFAIKMMDKINSFLKQ---DISEKADFKESLQKL 431


>gi|51598548|ref|YP_072736.1| flagellum-specific ATP synthase [Borrelia garinii PBi]
 gi|51573119|gb|AAU07144.1| flagellum-specific ATP synthase [Borrelia garinii PBi]
          Length = 436

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 158/405 (39%), Positives = 245/405 (60%), Gaps = 9/405 (2%)

Query: 36  VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L      GD  ++ Q  N     +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAFGDLCLIDQRNNKKVFAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   S  K         K+ P +NR   E+   TG++V+D
Sbjct: 92  EINLSDELLGRVIDSLGRPIDNKGSFLKNRYKELTFEKINP-INRSIFEEQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVEKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PV++GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+AD+++++L
Sbjct: 271 LGEPPVSKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L + G YP ++ L+S SR  ++  + +++KL+    +L+  +++  D+   
Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSINRIMNLEKQKLIMKARNLLSIYKDYEDLIRT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL----SSEDVFQEI 433
           G Y  G +  +D A+ + P I DF+ Q  +++    + ED  +EI
Sbjct: 390 GIYIKGSNKDVDFAISKYPKIIDFISQGINEIFDFENLEDEIREI 434


>gi|218249447|ref|YP_002374811.1| flagellar protein export ATPase FliI [Borrelia burgdorferi ZS7]
 gi|226321606|ref|ZP_03797132.1| flagellar protein export ATPase FliI [Borrelia burgdorferi Bol26]
 gi|218164635|gb|ACK74696.1| flagellar protein export ATPase FliI [Borrelia burgdorferi ZS7]
 gi|226232795|gb|EEH31548.1| flagellar protein export ATPase FliI [Borrelia burgdorferi Bol26]
          Length = 436

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/387 (40%), Positives = 235/387 (60%), Gaps = 5/387 (1%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  +   +N   +  +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAIGDLCLIDQRNGKKVCAEVLGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   S         I  K+ P +NR   E    TG++V+D
Sbjct: 92  EINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRSIFEDQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+GSG+GKSTLL M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+AD+++++L
Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    +L+  +++  D+   
Sbjct: 330 DGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           G Y  G +  +D A+ + P I +F+ Q
Sbjct: 390 GIYLKGSNKDVDFAISKYPKIINFISQ 416


>gi|77457766|ref|YP_347271.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf0-1]
 gi|77381769|gb|ABA73282.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf0-1]
          Length = 452

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/356 (41%), Positives = 215/356 (60%), Gaps = 3/356 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+ +DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P +NR  +      GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LNRDPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER G +EK  G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEKGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     + 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVAP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +  +       L  R++++RD+  +G Y  G D   D A++  P +  +L+Q  +D
Sbjct: 376 EHMQRAQYFKQLWSRYQQSRDLISVGAYVAGGDRETDLAINLQPQLVRYLRQGLND 431


>gi|15605402|ref|NP_220188.1| type III secretion system ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|166154886|ref|YP_001653141.1| type III secretion system ATPase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|255311495|ref|ZP_05354065.1| type III secretion system ATPase [Chlamydia trachomatis 6276]
 gi|255317797|ref|ZP_05359043.1| type III secretion system ATPase [Chlamydia trachomatis 6276s]
 gi|255349058|ref|ZP_05381065.1| type III secretion system ATPase [Chlamydia trachomatis 70]
 gi|255503596|ref|ZP_05381986.1| type III secretion system ATPase [Chlamydia trachomatis 70s]
 gi|3329120|gb|AAC68264.1| Yops secretion ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|165930874|emb|CAP06436.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|289525713|emb|CBJ15194.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           Sweden2]
 gi|296435283|gb|ADH17461.1| type III secretion system ATPase [Chlamydia trachomatis E/150]
 gi|296436210|gb|ADH18384.1| type III secretion system ATPase [Chlamydia trachomatis G/9768]
 gi|296437138|gb|ADH19308.1| type III secretion system ATPase [Chlamydia trachomatis G/11222]
 gi|296438070|gb|ADH20231.1| type III secretion system ATPase [Chlamydia trachomatis G/11074]
 gi|296439001|gb|ADH21154.1| type III secretion system ATPase [Chlamydia trachomatis E/11023]
 gi|297140571|gb|ADH97329.1| type III secretion system ATPase [Chlamydia trachomatis G/9301]
 gi|297748800|gb|ADI51346.1| SctN [Chlamydia trachomatis D-EC]
 gi|297749680|gb|ADI52358.1| SctN [Chlamydia trachomatis D-LC]
          Length = 442

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118
           +V+    + V++ P+G    +S    V   G    I       GRV+N LG PID +   
Sbjct: 61  EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120

Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D    I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+L
Sbjct: 121 PLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSL 180

Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L M AR ++  D  +I+L+GERGREVREFIE+ LG+  +K+SV+VV+TSD+S  LR  A 
Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLE
Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LA
Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +  
Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FLKQ   D+  +  ++E  ++L+
Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438


>gi|90021830|ref|YP_527657.1| flagellum-specific ATP synthase [Saccharophagus degradans 2-40]
 gi|89951430|gb|ABD81445.1| ATPase FliI/YscN [Saccharophagus degradans 2-40]
          Length = 458

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/380 (40%), Positives = 227/380 (59%), Gaps = 7/380 (1%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVIN 107
           V+   KN D   +V+  N D  Y+ PV   E +  G  V      + ++      GR+IN
Sbjct: 58  VLPHNKNID--AEVVGFNGDKTYLMPVQKVEGLQPGARVVPLDAHQHMAIGEHLRGRIIN 115

Query: 108 ALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
            +G+P+DG   L GK ++ M   +  P  ++R  ++     G+R I+    +  GQRIG+
Sbjct: 116 GIGQPLDGKGPLPGKSNVDMAPSAINP--LSRHPIDAPLDVGVRAINGLLTVGRGQRIGL 173

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSD 225
           FAGSG+GKS LL M  R    D V++ L+GERGREV+EFI+  LGD  + ++VV+ + +D
Sbjct: 174 FAGSGVGKSVLLGMMTRFTTADIVVVGLIGERGREVKEFIDQILGDAGMSRAVVIASPAD 233

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           ++P++R  A      +AE+F  +G N LL++DS+TR+A + REI+   GE P  +GYP S
Sbjct: 234 DAPLMRLRAAELCTRVAEFFRDQGLNCLLLMDSLTRYAQAQREISLAIGEPPATKGYPPS 293

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VFS++P L+ER G ++K  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAEE
Sbjct: 294 VFSKIPELVERAGNADKGGGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRDLAEE 353

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G YP +D  ASVSR+     + D  +       L+ R+   +D+  IG Y PG D  +D 
Sbjct: 354 GIYPAIDISASVSRVMPSIVTPDHLQKAQKFKALLSRYRANKDLISIGAYTPGTDPNIDG 413

Query: 406 AVHQVPIIYDFLKQSPSDLS 425
           A+ + P +  ++ Q   + S
Sbjct: 414 AIERYPHLNKYICQGMKEAS 433


>gi|237750216|ref|ZP_04580696.1| flagellum-specific ATP synthase [Helicobacter bilis ATCC 43879]
 gi|229374110|gb|EEO24501.1| flagellum-specific ATP synthase [Helicobacter bilis ATCC 43879]
          Length = 455

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 171/440 (38%), Positives = 250/440 (56%), Gaps = 16/440 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQ 61
           +NL+    L  + S N     G I S+ +       LS  V  GD V + +G ++   G 
Sbjct: 20  ENLKQKLSLTTNLSPNF----GEIISVETNIIKAVGLSPSV--GDVVWLIRGNDTRTEGI 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI  + ++  I P    E    GD V        I       GRVIN LG P+D   SLG
Sbjct: 74  VIATHKEVFSISPFSFTEGFKSGDRVMIAKEGLNIPVGDELLGRVINPLGVPLD---SLG 130

Query: 121 K--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    I++    A+ R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 131 ALYASACTPIINAPISALKRGLIDEVFSVGVKSIDSLLTCGKGQKMGIFAGSGVGKSTLM 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  +       +++L+GERGREV EFIE  LG NL+ +V+VVATSD+SP++RK    +A
Sbjct: 191 GMIVKGSAAQIKVVALIGERGREVPEFIEKNLGGNLENTVLVVATSDDSPLMRKYGAFSA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + IAE+F  KG +VL I+DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G
Sbjct: 251 MAIAEFFKDKGHDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+ KG+ITA  +VL++GD+ NDPIAD  RSILDGHI+L+R+L + G YPP++ L S S
Sbjct: 311 -KEEGKGSITAFFTVLMEGDDLNDPIADQSRSILDGHIMLDRNLTDFGIYPPINILNSSS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + K        +    +E   +  IG Y  G D+ LD+A+ +  ++ +FL 
Sbjct: 370 RVMHDIISQEHKNAARKFRRMQALLKENEVLIRIGSYHKGNDVELDEAIDKKALMEEFLG 429

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q  +  SS +  + IT+ ++
Sbjct: 430 QDENIQSSYE--ESITQMIE 447


>gi|260779314|ref|ZP_05888206.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605478|gb|EEX31773.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 448

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 152/382 (39%), Positives = 226/382 (59%), Gaps = 7/382 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  I Y+ P+  +G   +   ++   G   +  S  W GRV+N LG+ +D    
Sbjct: 66  AQVVGFDHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSENWMGRVVNGLGEALDDGPV 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L  GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LQGGDRVSLEPKPINP--LKRRPVDSPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++ L+GERGREVREFIE  L    + K++++ A +DESP++R  A L
Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFIESNLTPEARDKAIIIAAPADESPLMRLRAML 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  KG +VLL++DS+TR+A + REIA + GE P  RGYP SVF+ LP+LLER
Sbjct: 244 LCHRVAEYFRDKGKDVLLMVDSLTRYAMAQREIALSLGEPPATRGYPPSVFNALPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE   G++TA+ ++L  GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENPNGSLTAIYTILAAGDDQQDPVVDSARAILDGHVVLSRKLAEQGHYPAIDVNAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR            L +        + + +D+  +GGY+PG D  LD++V   P +  +
Sbjct: 364 VSRCMTACSQPAHLTLANEFRKTYSNYLQVKDLLPLGGYQPGQDPELDRSVALYPQLTAY 423

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L+Q+     S D  Q +T+  Q
Sbjct: 424 LQQAAD--CSVDFPQSLTELAQ 443


>gi|312884802|ref|ZP_07744494.1| flagellum-specific ATP synthase FliI [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367454|gb|EFP95014.1| flagellum-specific ATP synthase FliI [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 447

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/363 (41%), Positives = 222/363 (61%), Gaps = 5/363 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  + +I Y+ P+  +G   +   ++   G   +  S  W GRV++ LG P+D D  
Sbjct: 66  AQVVGFDHNIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSDKWLGRVLDGLGHPLDDDGK 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +  G+ +S+E     P  + R+ V+     GI+ I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 IIGGERVSLEPRRINP--LKRRPVDTPLNVGIKAINGLITVGKGQRIGLMAGSGVGKSIL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  ++   D +++ L+GERGREVREFIE  L    + K+V++ A +DESP++R  A L
Sbjct: 184 LGMMCKNTEADVIVVGLIGERGREVREFIEKNLTPEARAKAVIIAAPADESPLMRLKATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  KG +VLL++DS+TR+A + REIA + GE P  RGYP SVF+ LP+LLER
Sbjct: 244 LCHRVAEYFRDKGKDVLLMMDSLTRYAMAQREIALSLGEPPATRGYPPSVFNILPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G +E  +G++TA+ ++L   D+  DP+ DS R+ILDGHIVL+R LAE+G YP +D  AS
Sbjct: 304 AGNAENPQGSLTAIYTILAVSDDQQDPVVDSARAILDGHIVLSRHLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR            L S        + + +D+  +GGY+PG D  LD++V   PI+ ++
Sbjct: 364 ISRCMGTCVETAHLTLASEFRRHYSAYLQVKDLIPLGGYQPGQDPELDRSVGLYPILSEY 423

Query: 417 LKQ 419
           LKQ
Sbjct: 424 LKQ 426


>gi|76789409|ref|YP_328495.1| type III secretion system ATPase [Chlamydia trachomatis A/HAR-13]
 gi|237803099|ref|YP_002888293.1| type III secretion system ATPase [Chlamydia trachomatis
           B/Jali20/OT]
 gi|237805020|ref|YP_002889174.1| type III secretion system ATPase [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|76167939|gb|AAX50947.1| SctN [Chlamydia trachomatis A/HAR-13]
 gi|231273320|emb|CAX10235.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274333|emb|CAX11128.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 442

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118
           +V+    + V++ P+G    +S    V   G    I       GRV+N LG PID +   
Sbjct: 61  EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120

Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D    I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+L
Sbjct: 121 PLESVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSL 180

Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L M AR ++  D  +I+L+GERGREVREFIE+ LG+  +K+SV+VV+TSD+S  LR  A 
Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLE
Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LA
Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +  
Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FLKQ   D+  +  ++E  ++L+
Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438


>gi|15594633|ref|NP_212422.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31]
 gi|221217707|ref|ZP_03589175.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 72a]
 gi|223888865|ref|ZP_03623456.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 64b]
 gi|224533156|ref|ZP_03673756.1| flagellar protein export ATPase FliI [Borrelia burgdorferi WI91-23]
 gi|224533724|ref|ZP_03674312.1| flagellar protein export ATPase FliI [Borrelia burgdorferi
           CA-11.2a]
 gi|225549175|ref|ZP_03770150.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 94a]
 gi|225550200|ref|ZP_03771160.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 118a]
 gi|226320589|ref|ZP_03796149.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 29805]
 gi|1706850|sp|P52607|FLII_BORBU RecName: Full=Flagellum-specific ATP synthase
 gi|1165272|gb|AAA85611.1| FliI [Borrelia burgdorferi]
 gi|2688178|gb|AAC66660.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31]
 gi|221192384|gb|EEE18603.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 72a]
 gi|223885681|gb|EEF56780.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 64b]
 gi|224511883|gb|EEF82284.1| flagellar protein export ATPase FliI [Borrelia burgdorferi WI91-23]
 gi|224513017|gb|EEF83380.1| flagellar protein export ATPase FliI [Borrelia burgdorferi
           CA-11.2a]
 gi|225369312|gb|EEG98765.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 118a]
 gi|225370401|gb|EEG99839.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 94a]
 gi|226234008|gb|EEH32729.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 29805]
 gi|312147904|gb|ADQ30563.1| flagellar protein export ATPase FliI [Borrelia burgdorferi JD1]
 gi|312148976|gb|ADQ29047.1| flagellar protein export ATPase FliI [Borrelia burgdorferi N40]
          Length = 436

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/341 (43%), Positives = 220/341 (64%), Gaps = 4/341 (1%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I +G+ V+   +   I+ S    GRVI++LG+PID   S         I  K+ P +NR 
Sbjct: 78  IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRS 136

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
             E    TG++V+D F P+  GQR+G+F+GSG+GKSTLL M A++   D  +I+ +GERG
Sbjct: 137 IFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERG 196

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE+ EFIE  LG+  LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DS
Sbjct: 197 RELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDS 256

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD
Sbjct: 257 ITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +P+AD+++++LDGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    +
Sbjct: 316 DFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARN 375

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L+  +++  D+   G Y  G +  +D A+ + P I +F+ Q
Sbjct: 376 LLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416


>gi|254255070|ref|ZP_04948387.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
 gi|124899715|gb|EAY71558.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
          Length = 476

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/358 (41%), Positives = 213/358 (59%), Gaps = 17/358 (4%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P G G ++++G              A W GR+++ +G+P DG   L  GD  +++   
Sbjct: 124 VMPAGAGRQLTIG--------------AAWRGRIVDGMGEPFDGGGPL-TGDAPLDLRPP 168

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               M ++ V      G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V+
Sbjct: 169 RINPMKKRPVAGVLDVGVRAINGMLTIGRGQRVGLFAGSGVGKSVLLGMITRQTAADVVV 228

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVREF+E  LG D ++K++VVVA +DESP++R MA      IA +F  +GD
Sbjct: 229 VGLIGERGREVREFVEHALGPDGMRKAIVVVAPADESPLMRLMATELCHAIAAHFRDRGD 288

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TR+A + RE+A   GE P  +GYP SVF  LP L+ER G  E   G+++A+
Sbjct: 289 NVLLLVDSLTRYAMAQRELALALGEPPATKGYPPSVFGMLPALVERAGNGEG-SGSMSAI 347

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DP+ D+ R+ILDGHI+L+R LA +G YP +D   SVSR      S+ + 
Sbjct: 348 YTVLAEGDDEQDPVVDTARAILDGHIMLSRELAAQGHYPAIDVTRSVSRCMSLVASSAQC 407

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              S L  L+ R  + RD+  +GGY  G D   D+AV   P I  FL Q+  D +  D
Sbjct: 408 AAASELKDLLSRHVQVRDLIPLGGYVAGADPATDRAVELHPRIAAFLSQAQGDAAPYD 465


>gi|115377823|ref|ZP_01465011.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Stigmatella aurantiaca DW4/3-1]
 gi|310820302|ref|YP_003952660.1| ATPase, flII/yscn family [Stigmatella aurantiaca DW4/3-1]
 gi|115365155|gb|EAU64202.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Stigmatella aurantiaca DW4/3-1]
 gi|309393374|gb|ADO70833.1| ATPase, FliI/YscN family [Stigmatella aurantiaca DW4/3-1]
          Length = 436

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 202/336 (60%), Gaps = 7/336 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+   G+PIDG   L    +   +    P    R R+E     G+R ID    +  GQ
Sbjct: 101 GRVLGGTGEPIDGK-PLPDDLIDWSVDRDCPDPFTRMRIEHPLPLGVRCIDGLLTVGEGQ 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAGSG+GKSTL+   AR+   +  +I+L+GERGREVREFIED LG+  L++SV+V 
Sbjct: 160 RVGLFAGSGVGKSTLMGQIARNTKAELNVIALIGERGREVREFIEDALGEEGLRRSVLVC 219

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R  A   A  IAEYF  +G NV+ +LD++TR A + REI    GE P  +G
Sbjct: 220 ATSDQPSLVRLKAAYVATAIAEYFRERGGNVMFMLDTVTRLARAQREIGLAVGEPPARQG 279

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVFS LPR+LER G S K  G  TA+ + LV G +  +PIAD VR ILDGH +LNR+
Sbjct: 280 YPPSVFSMLPRILERTGNSAK--GKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILNRA 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L E  ++P +D LAS+SR+     S D KK    L   +  +E+ RD+ L+G Y+ G D 
Sbjct: 338 LGERNQWPAMDVLASLSRVMSGIVSKDHKKAAGKLRETLSTYEKQRDLILLGAYQYGTDP 397

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             D A+ +   I D+LKQ   D  S   F+E    L
Sbjct: 398 RTDYAIDKYDAIIDYLKQ---DTHSNSTFEETVNGL 430


>gi|71906409|ref|YP_283996.1| ATPase FliI/YscN [Dechloromonas aromatica RCB]
 gi|71846030|gb|AAZ45526.1| ATPase FliI/YscN [Dechloromonas aromatica RCB]
          Length = 472

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 202/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ +G+P+D    L   + +  + S+    M+R  + +    GIR I+    +  GQ
Sbjct: 137 GRVLDGVGRPLDNKGPLIAAE-TRPLQSRPINPMSRAAIHQPLDVGIRAINALLTVGRGQ 195

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    + +++ L+GERGREV+EFIE  LG+  +++SVVV 
Sbjct: 196 RMGLFAGSGVGKSVLLGMMARYTEAEVIVVGLIGERGREVKEFIEQILGEEGMRRSVVVA 255

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D  P++R      A TIAEYF  +G +VLLI+DS+TR+A + REIA   GE P  RG
Sbjct: 256 APADTGPLMRLQGAAYATTIAEYFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATRG 315

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP+L+ER G  ++  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+
Sbjct: 316 YPPSVFARLPQLVERAGNGQEGGGSITAFYTVLAEGDDQQDPIADSARAILDGHIVLSRT 375

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D   S+SR       A     +     L  R++ +RD+  +G Y PG D 
Sbjct: 376 LADAGHYPAIDIEQSISRAMVNLIDAPHLDQIRKFKVLFARYQRSRDLISVGAYAPGSDP 435

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD+A+   P +  FL+Q
Sbjct: 436 VLDQAISLYPRMESFLQQ 453


>gi|15618617|ref|NP_224903.1| type III secretion system ATPase [Chlamydophila pneumoniae CWL029]
 gi|15836239|ref|NP_300763.1| type III secretion system ATPase [Chlamydophila pneumoniae J138]
 gi|16752333|ref|NP_444591.1| type III secretion system ATPase [Chlamydophila pneumoniae AR39]
 gi|33242065|ref|NP_877006.1| type III secretion system ATPase [Chlamydophila pneumoniae TW-183]
 gi|4377010|gb|AAD18846.1| Yops secretion ATPase [Chlamydophila pneumoniae CWL029]
 gi|6672040|dbj|BAA88657.1| Yop N [Chlamydophila pneumoniae]
 gi|7188979|gb|AAF37934.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila
           pneumoniae AR39]
 gi|8979079|dbj|BAA98914.1| YopN [Chlamydophila pneumoniae J138]
 gi|33236575|gb|AAP98663.1| YopN [Chlamydophila pneumoniae TW-183]
          Length = 442

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118
           +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETKG 120

Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D +  I    P  ++R ++ +   TG+R ID    +  GQRIG+FAG+G+GKS+L
Sbjct: 121 PLQNVDQTFPIFRAPPDPLHRAKLRQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSL 180

Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR  A 
Sbjct: 181 LGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLLE
Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LA
Sbjct: 301 RSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +  
Sbjct: 359 SISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREIDFAIDHIDKLNR 418

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FLKQ   D+  +  ++E  ++L+
Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438


>gi|295696116|ref|YP_003589354.1| flagellar protein export ATPase FliI [Bacillus tusciae DSM 2912]
 gi|295411718|gb|ADG06210.1| flagellar protein export ATPase FliI [Bacillus tusciae DSM 2912]
          Length = 441

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 204/329 (62%), Gaps = 4/329 (1%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GRV++ LG+PIDG   +  G+    I    PP M R  V +    G+R I
Sbjct: 92  LRVPTGPGILGRVVDGLGRPIDGLGPVA-GEFQDPIEQPPPPPMARTPVNQPLSVGVRAI 150

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           D    +  GQRIG+FAGSG+GKSTLL M AR    D  +I L+GERGREV++FI   L +
Sbjct: 151 DGLLTVGQGQRIGIFAGSGVGKSTLLGMIARYTEADVTVIGLIGERGREVQDFIARELDE 210

Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
              K++VVV ATSD+ P++R    LTA  +AE F  +G  VLL++DS+TRFA + RE+  
Sbjct: 211 EGRKRAVVVAATSDQPPLMRIKGALTATAMAERFRRQGRRVLLLMDSVTRFAMACREVGL 270

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
            +GE P ARGY  SVF+ LP+LLER G +    G+ITA  +VLV+GD+ N+PIAD+VR I
Sbjct: 271 AAGEPPTARGYTPSVFAALPKLLERTGTART--GSITAFYTVLVEGDDFNEPIADAVRGI 328

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIVL+R +A++G YP +D  AS SRL ++       +  +    L+  +EE  D+  
Sbjct: 329 LDGHIVLSRKIAQQGLYPAIDVTASTSRLMNQVAETAHVRAAARFKALLAAYEEAEDLIQ 388

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           IG YR G  L +D A+   P ++ +L Q+
Sbjct: 389 IGAYREGTRLEVDTALRLRPRMWAYLAQN 417


>gi|119476318|ref|ZP_01616669.1| flagellum-specific ATP synthase [marine gamma proteobacterium
           HTCC2143]
 gi|119450182|gb|EAW31417.1| flagellum-specific ATP synthase [marine gamma proteobacterium
           HTCC2143]
          Length = 474

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 207/320 (64%), Gaps = 2/320 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+  G+P+D    LG  D S+++ +++   + R+ + +    GIR I+    +  
Sbjct: 107 LLGRVIDGAGRPLDSKGPLGCTD-SVDMQAELINPLQRKPISEVLDVGIRAINSVLTVGR 165

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQR+G+FAGSG+GKS LL M  R    D V++ LVGERGREV+EFIE  L +  L ++VV
Sbjct: 166 GQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLVGERGREVKEFIEQVLDEEGLSRAVV 225

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V + +D++P++R  A + A  IAE F  +G +VLL++DS+TRFA + REIA + GE P  
Sbjct: 226 VASPADDAPLMRMRAAMLATRIAESFRDQGKHVLLLMDSLTRFAQAQREIALSIGEPPAT 285

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF+++P+L+ER G      G++TA  +VL +GD+  DP+AD+ R+ILDGHIVL+
Sbjct: 286 KGYPPSVFAKIPQLVERAGNGADGSGSVTAFYTVLTEGDDMQDPVADAARAILDGHIVLS 345

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA+EG YP +D  AS+SR      + +       L HL  R++++RD+  +G Y  G 
Sbjct: 346 RALADEGHYPAIDVEASISRAMPNIITGEHLAAARRLRHLYSRYQQSRDLISVGAYVAGS 405

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D   D A+ ++P I  FL+Q
Sbjct: 406 DTETDAAIERLPAIRRFLQQ 425


>gi|260222427|emb|CBA31980.1| Flagellum-specific ATP synthase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 478

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/331 (44%), Positives = 204/331 (61%), Gaps = 4/331 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149
           G  R+       GRV+++ G P+D    L   D+S  ++ + P  AM+R  V +   TG+
Sbjct: 125 GMLRLPLGDGLLGRVVDSQGFPMDRMGPLA--DVSARVLDRKPINAMDRAPVREALDTGV 182

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIED 
Sbjct: 183 RSINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFIEDI 242

Query: 210 LG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG D  ++SVVV A +D  P+LR      A  IAEYF  +G +VLL++DS+TR+A + RE
Sbjct: 243 LGVDGRERSVVVAAPADAPPLLRMQGASYATAIAEYFRDQGKHVLLLMDSLTRYAMAQRE 302

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA   GE P  +GYP S F++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ 
Sbjct: 303 IALAIGEPPATKGYPPSCFAKLPQLVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAA 362

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+RSLAE G YP +D   S SR+          +       L  ++++ RD
Sbjct: 363 RAILDGHIVLSRSLAESGHYPAIDVEQSASRVMHNVVDRGHFEQARRFRSLYSKYQKGRD 422

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  IG Y PG D +LD+A+   P +  FL+Q
Sbjct: 423 LVQIGAYAPGSDPVLDEAIALQPGMIQFLQQ 453


>gi|238023716|ref|YP_002907948.1| type III secretion system ATPase [Burkholderia glumae BGR1]
 gi|237878381|gb|ACR30713.1| Type III secretion system ATPase [Burkholderia glumae BGR1]
          Length = 450

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/413 (38%), Positives = 232/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           V + G +  +      V+ L   V LG+    +  +   L   +V+    D+  + P   
Sbjct: 29  VARTGKVMEVVGTVIKVSGLD--VTLGELCELRAPDGTLLQRAEVVGFTRDVALLSPFSR 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +S    V   GR   I       GRV++ LG+PIDG   L   D    ++ + P  M
Sbjct: 87  LENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPPLDSDDWR-PVIVQPPDPM 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+ MFAR    D  +I+L+G
Sbjct: 146 KRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLMGMFARGAACDINVIALIG 205

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG + + +SVVV ATSD S + R  A  TA  IAEYF  +G  VLL+
Sbjct: 206 ERGREVREFIELILGPEGMARSVVVCATSDRSSMERAKAAHTATAIAEYFRDRGLRVLLM 265

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG--MGATGSITALYTVLA 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + +   DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  S 
Sbjct: 324 EDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAIDVLGSLSRVMSLVVPDAHARAASR 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  +G Y+PG + + D+A+ +   I  FL Q   D +  D
Sbjct: 384 IRELMAKHREVEVLLQVGEYQPGQNPLADEAIQKADAIRAFLCQRTRDYAPYD 436


>gi|111115113|ref|YP_709731.1| flagellum-specific ATP synthase [Borrelia afzelii PKo]
 gi|216264022|ref|ZP_03436016.1| flagellar protein export ATPase FliI [Borrelia afzelii ACA-1]
 gi|110890387|gb|ABH01555.1| flagellum-specific ATP synthase [Borrelia afzelii PKo]
 gi|215980066|gb|EEC20888.1| flagellar protein export ATPase FliI [Borrelia afzelii ACA-1]
          Length = 436

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/406 (39%), Positives = 245/406 (60%), Gaps = 6/406 (1%)

Query: 36  VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  ++ Q  N     +V+  N   V +        I +G+ V+   +  
Sbjct: 32  VESLGPQCAVGDLCLIDQRNNKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I+ S    GRVI++LG+PID   S         I  K+ P ++R   E+   TG++V+D
Sbjct: 92  EINLSDELLGRVIDSLGRPIDNKGSFLNNKYKELIFEKINP-ISRSIFEEQILTGVKVLD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERGRE+ EFIE  LG+ 
Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSV+VV+TSDESPI R      A  IAEYF  +G +V L+ DSITRFA++ RE++ +
Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD+  +P+AD+++++L
Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFAEPVADNIKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGH++L+R L + G YP ++ L+S SR   +  S +++KL+    +L+  +++  D+   
Sbjct: 330 DGHVILDRDLFDRGIYPSINILSSTSRSIHRIMSLEKQKLIMKARNLLSVYKDYEDLIRT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437
           G Y  G +  +D A+ + P I DF+ Q  ++    E++  EI K L
Sbjct: 390 GIYLKGSNKDVDFAISKYPKIIDFISQGINETFDFENLEDEIRKIL 435


>gi|330828802|ref|YP_004391754.1| flagellar protein export ATPase FliI [Aeromonas veronii B565]
 gi|328803938|gb|AEB49137.1| Flagellar protein export ATPase FliI [Aeromonas veronii B565]
          Length = 443

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 202/320 (63%), Gaps = 2/320 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+ +G+P+DG   +           ++ P ++R+ + +    G+R I+    +  
Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFIED LG+  + +SVV
Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEDILGEEGRARSVV 219

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR+A + REIA   GE P  
Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+
Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA+ G YP +D   S+SR+     S +   L  +L      +++ RD+  IG Y  G 
Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYSLYQQNRDLITIGAYSQGS 399

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D  +D+A+ Q P +  FL+Q
Sbjct: 400 DPRIDRAIIQKPYLDQFLQQ 419


>gi|206558923|ref|YP_002229683.1| flagellum-specific ATP synthase FliI [Burkholderia cenocepacia
           J2315]
 gi|18182541|gb|AAL65163.1|AF453480_5 flagellar ATPase [Burkholderia cepacia]
 gi|198034960|emb|CAR50832.1| flagellum-specific ATP synthase FliI [Burkholderia cenocepacia
           J2315]
          Length = 501

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 161 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 218

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 219 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 278

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 279 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 338

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 339 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 398

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 399 ALAEAGHYPAIDIEASISRAMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRD 458

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 459 AQLDRAIALYPRIEAFLQQ 477


>gi|254240042|ref|ZP_04933364.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           2192]
 gi|126193420|gb|EAZ57483.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           2192]
          Length = 440

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/336 (43%), Positives = 209/336 (62%), Gaps = 4/336 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R++      G+V++ LG+P DG     +      +    PP M+R+ +E+    G+R
Sbjct: 94  GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPPPMSRRLIERPLSLGVR 152

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGREVREFIE  L
Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI
Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF+ LPRL+ER G SE+  G+ITA+ +VLV+GD+ ++P+AD  R
Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   + ++EE   +
Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             IG Y+ G D   D+A+ ++  I  +L+Q   + S
Sbjct: 391 LKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETS 426


>gi|313895951|ref|ZP_07829505.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975376|gb|EFR40837.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 458

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/373 (43%), Positives = 228/373 (61%), Gaps = 14/373 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127
           V + PVG  + I  G  V   GR  R+       GRV++ LG PIDG   +    L+ E 
Sbjct: 80  VLLMPVGEMQGIGPGCEVTATGRRLRVKVGEELLGRVLDGLGNPIDGKGPI----LTKEE 135

Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + +  P  ++R R+ +    G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+ 
Sbjct: 136 YPLQAPPPSPLSRPRISENLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNT 195

Query: 186 CFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+LVGERGREVR+FIE  LG+  LK+SVVVVATSD+  ++R    +T   IAEY
Sbjct: 196 EADISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEY 255

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G S  E 
Sbjct: 256 FRDRGHKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--EH 313

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L SVSR+  + 
Sbjct: 314 GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEV 373

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  +    +  L+  + E  D+  IG Y  G    +D A+ ++  I DFL Q   ++
Sbjct: 374 VPKEHLEAAQEMRQLMAVYSEAEDLIHIGAYVKGSSPKIDAAIQKIEGINDFLCQDIFEV 433

Query: 425 SSEDVFQEITKKL 437
           +S   +++  ++L
Sbjct: 434 TS---YEDTERRL 443


>gi|325521062|gb|EGC99991.1| flagellum-specific ATP synthase [Burkholderia sp. TJI49]
          Length = 342

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/321 (45%), Positives = 201/321 (62%), Gaps = 4/321 (1%)

Query: 101 WCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
             GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    + 
Sbjct: 1   MLGRVVDASGRPLDGLGPLASKLDAPLSAPSINP--LDREPIHHVLDVGVRAINGLLTVG 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SV
Sbjct: 59  RGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSV 118

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P 
Sbjct: 119 VVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPA 178

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 179 TKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 238

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+LAE G YP +D  AS+SR           + V     ++ R++  RD+  +G Y PG
Sbjct: 239 SRALAEAGHYPAIDIEASISRAMTALIDDAHLERVRHFKQMLSRYQRNRDLIAVGAYAPG 298

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D  LD+A+   P I  FL+Q
Sbjct: 299 RDAQLDRAIALYPRIESFLQQ 319


>gi|166154011|ref|YP_001654129.1| type III secretion system ATPase [Chlamydia trachomatis 434/Bu]
 gi|301335211|ref|ZP_07223455.1| type III secretion system ATPase [Chlamydia trachomatis L2tet1]
 gi|165929999|emb|CAP03482.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           434/Bu]
          Length = 442

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118
           +V+    + V++ P+G    +S    V   G    I       GRV+N LG PID +   
Sbjct: 61  EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120

Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D    I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+L
Sbjct: 121 PLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSL 180

Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L M AR ++  D  +I+L+GERGREVREFIE+ LG+  +K+S++VV+TSD+S  LR  A 
Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSIIVVSTSDQSSQLRLNAA 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLE
Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LA
Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +  
Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FLKQ   D+  +  ++E  ++L+
Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438


>gi|269302494|gb|ACZ32594.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila pneumoniae LPCoLN]
          Length = 442

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118
           +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETKG 120

Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D +  I    P  ++R ++ +   TG+R ID    +  GQRIG+FAG+G+GKS+L
Sbjct: 121 PLQNVDQTFPIFRAPPDPLHRAKLRQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSL 180

Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR  A 
Sbjct: 181 LGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLLE
Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LA
Sbjct: 301 RSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +  
Sbjct: 359 SISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FLKQ   D+  +  ++E  ++L+
Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438


>gi|312879586|ref|ZP_07739386.1| type III secretion system ATPase, FliI/YscN [Aminomonas paucivorans
           DSM 12260]
 gi|310782877|gb|EFQ23275.1| type III secretion system ATPase, FliI/YscN [Aminomonas paucivorans
           DSM 12260]
          Length = 443

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/361 (42%), Positives = 222/361 (61%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D V + P+G   +I  G D+V       +       GR+++ LG P+DG   L
Sbjct: 64  EVVGFRSDRVLLMPLGELSDIGPGCDVVAMGPTLGVHVGDSLLGRIVDGLGVPLDGKGPL 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +  P  + RQ ++K    G++V+D    L  GQR+G+FAGSG+GKS LL 
Sbjct: 124 VAKDF-YPLFATPPHPLKRQMIDKPLSVGVKVLDGLLTLGQGQRVGIFAGSGVGKSVLLG 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+      +I+LVGERGREV+EF+E  LG+  L +SVVVVATSD+ P++R  A LTA
Sbjct: 183 MMARNTEAAVNVIALVGERGREVKEFVERDLGEAGLARSVVVVATSDQPPLVRLKAALTA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G NVLL++DS+TR A + R++    GE P  RGY  SVF+ LPRLLER G
Sbjct: 243 TAIAEYFRDQGGNVLLMMDSVTRVAMAQRDVGLAIGEPPATRGYTPSVFAFLPRLLERSG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VLV+GD+ N+P+AD+VR ILDGH VL+R+LA +  YP V+   SVS
Sbjct: 303 AG--ERGSITAIYTVLVEGDDMNEPVADTVRGILDGHFVLSRTLAAKNHYPSVEVGRSVS 360

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S +  +    +  L+  +EE +D+  IG Y+ G +  +D A+  +  +  FL+
Sbjct: 361 RVMPSIVSPEHLEAAGRIRELLAVYEEAQDLVNIGAYKAGSNPRVDWALENLDPVRRFLR 420

Query: 419 Q 419
           Q
Sbjct: 421 Q 421


>gi|291536005|emb|CBL09117.1| type III secretion system ATPase, FliI/YscN [Roseburia intestinalis
           M50/1]
          Length = 435

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/374 (40%), Positives = 234/374 (62%), Gaps = 6/374 (1%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
            ++ + +N   + +V+      + + P    E I +G +V + G    +       G  +
Sbjct: 45  IIIDREQNISTMAEVVGFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTL 104

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           + +G+P D ++     D  +E +   P  M R+ +++    G++ +D    +  GQRIG+
Sbjct: 105 DGIGRPTDVEELSLSYDYPVEALP--PDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGI 162

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           FAGSG+GKSTLL MFAR+   D  +I+L+GERGREVREF+E  LG+  +K+SVV+VATSD
Sbjct: 163 FAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSD 222

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +  ++R  A  TA  IAEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP S
Sbjct: 223 KPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPS 282

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           V+SE+P+LLER G S  +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++
Sbjct: 283 VYSEMPKLLERAGTS--DKGSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQK 340

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
             YP +D L S+SR+     +++ K+L   L +++  + E  D+  IG Y+ G +  +D 
Sbjct: 341 NHYPAIDVLQSISRVMSSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDY 400

Query: 406 AVHQVPIIYDFLKQ 419
           A+ +   + +FL Q
Sbjct: 401 AIQKNQAVNEFLMQ 414


>gi|291277238|ref|YP_003517010.1| flagellum-specific ATP synthase [Helicobacter mustelae 12198]
 gi|290964432|emb|CBG40282.1| flagellum-specific ATP synthase [Helicobacter mustelae 12198]
          Length = 434

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/444 (37%), Positives = 248/444 (55%), Gaps = 22/444 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           ++  LE   QL+  +        G +  IT      + L+    +GD V VH+   S  L
Sbjct: 6   IKAKLEAPLQLSPKF--------GLVEKITPTILYASGLTP--SIGDIVCVHREDGSSGL 55

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
           G V     +     P    E   +GD VF     F +       GRVI+ LG PID    
Sbjct: 56  GMVTLCQSENFGFTPFSFIEGYKVGDKVFIEKEGFLLPVGKDVLGRVIDPLGNPIDE--- 112

Query: 119 LGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KG ++    + I+S+   AM R  +++ F  GI+ ID       GQ++G+FAGSG+GK
Sbjct: 113 --KGPITTSAHIPIISQPIKAMRRGVIDEVFSVGIKAIDGLLTCGKGQKLGIFAGSGVGK 170

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STL+ M  +       +++L+GERGREV EFI+  L +NL+ +V+VVATSD+S ++RK  
Sbjct: 171 STLMGMIVKGSKAPIKVVALIGERGREVPEFIQKNLDNNLENTVIVVATSDDSALMRKYG 230

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             +A+ +AE+F ++G +VL I+DS+TRFA + REI    GE P ++GYP SV + LP+L+
Sbjct: 231 AFSAMAVAEFFKNQGHDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLALLPQLM 290

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G  E+ +G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP+  L
Sbjct: 291 ERAG-KEEGRGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSRELTDFGIYPPIHIL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+++   + + +    +   L    +E   +  IG Y+ G D  LD+A+ +   + 
Sbjct: 350 NSASRVSNDIITKEHRNAAKNFRKLYALLKENEVLIRIGSYQKGTDPDLDEAIEKKKFME 409

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
           DF+ Q    L   D   E   K+Q
Sbjct: 410 DFITQEEDQLFDFDAIIEELYKIQ 433


>gi|330953751|gb|EGH54011.1| flagellum-specific ATP synthase [Pseudomonas syringae Cit 7]
          Length = 452

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q   D  S
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434


>gi|302342350|ref|YP_003806879.1| flagellar protein export ATPase FliI [Desulfarculus baarsii DSM
           2075]
 gi|301638963|gb|ADK84285.1| flagellar protein export ATPase FliI [Desulfarculus baarsii DSM
           2075]
          Length = 438

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/363 (42%), Positives = 218/363 (60%), Gaps = 4/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
           LG+V+      V I P      +  G LV   G    +       GRV++ LG P+DG  
Sbjct: 56  LGEVVGFKGQGVQIMPYADTRGLRPGCLVSSAGGAGLVKVGQALLGRVLDGLGNPVDGG- 114

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + + D    +  + P AM R R+ +    G++VI+    L  GQRIG+FAGSG+GKSTL
Sbjct: 115 PMPEWDQLYPLYRQAPSAMGRPRISQPVDVGVKVINALLTLGKGQRIGIFAGSGVGKSTL 174

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           +SM AR    D  +I LVGERGRE+REFIE  LG + L +SVV+VATSD+  ++R  A  
Sbjct: 175 MSMIARHTQADISVIGLVGERGRELREFIERDLGPEGLARSVVIVATSDQPALVRMRAAY 234

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +  +V+L++DS+TRFA + RE+  + GE P  +GY  SVF++LPRLLER
Sbjct: 235 LATAVAEYFRDQSRDVILMMDSVTRFAMAGREVGLSIGEPPTTKGYTPSVFAQLPRLLER 294

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE   G+IT + +VLV+GD+  +P+AD++RSILDGH VL R+LA+ G YP ++ L S
Sbjct: 295 AGTSEG-GGSITGIYTVLVEGDDVTEPVADAMRSILDGHFVLTRALADRGHYPAIELLGS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRLA      +       LT L+  +    D+  IG Y  G + ++D+A+  +  I  F
Sbjct: 354 ISRLARDINPPEVTTAARRLTELLAAYRRNEDLINIGAYADGSNPVIDRAIRMMERINKF 413

Query: 417 LKQ 419
           L Q
Sbjct: 414 LTQ 416


>gi|167617532|ref|ZP_02386163.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           Bt4]
          Length = 423

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 83  GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 141 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 200

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 201 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 260

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 261 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 320

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR           + V     ++ R++  RD+  +G Y PG D
Sbjct: 321 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 380

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 381 AQLDRAIALYPRIESFLQQ 399


>gi|296123334|ref|YP_003631112.1| ATPase, FliI/YscN family [Planctomyces limnophilus DSM 3776]
 gi|296015674|gb|ADG68913.1| ATPase, FliI/YscN family [Planctomyces limnophilus DSM 3776]
          Length = 443

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 214/332 (64%), Gaps = 10/332 (3%)

Query: 99  ACWCGRVINALGKPID-GDDSL--GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           A   GR+I + G+ +D G   L   + DL      K P  + R R+ K ++TG+R ID  
Sbjct: 93  AGLLGRIIGSRGEFLDEGSKPLLAHRADLH----GKPPGPLERPRIAKIWQTGVRAIDSL 148

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNL 214
             L  GQR+G+FAGSG+GKSTLL   AR    D  +++L+GERGREVREF++  LG + L
Sbjct: 149 LTLGEGQRMGIFAGSGVGKSTLLGQIARHSSADINVVALIGERGREVREFLDRDLGPEGL 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+SVV+VAT DE  ILR  A   A  IAE+F   G +V+L++DS+TRFA + REI   +G
Sbjct: 209 KRSVVIVATGDEPAILRLRAAWMATAIAEHFRDLGQHVVLMMDSVTRFALAQREIGLAAG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  RGYP SVF+ LPRLLER G S    G+IT + +VLVDGD+ N+PI+D+VR ILDG
Sbjct: 269 EPPATRGYPPSVFALLPRLLERSGCSPA--GSITGLYTVLVDGDDTNEPISDTVRGILDG 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+R LA++G++P +D L S+SR  +   + + ++   ++  L+  +++  D+  IG 
Sbjct: 327 HIVLSRKLAQQGQFPAIDVLQSISRSMNDITTTEHRQWALTVRQLLSSYQQNEDLISIGA 386

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           Y+ G + ++D A+   P I  +L Q P + ++
Sbjct: 387 YQNGSNALIDSAIQARPQILGYLGQKPQEQTT 418


>gi|260900953|ref|ZP_05909348.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ4037]
 gi|308110837|gb|EFO48377.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ4037]
          Length = 440

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG D + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    D +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PSDL
Sbjct: 371 ASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDL 427


>gi|295399812|ref|ZP_06809793.1| flagellar protein export ATPase FliI [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978215|gb|EFG53812.1| flagellar protein export ATPase FliI [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 426

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/361 (42%), Positives = 220/361 (60%), Gaps = 5/361 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P    + IS G +V   G+  +I       G+V+++LG P+DG   L KG   + I
Sbjct: 56  VLLMPFSTVQHISPGCIVEATGKPLQIRVGFPLIGKVLDSLGYPLDGS-PLSKGLQPISI 114

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  + R  + +  + G+RVID    +  GQR+G+FAGSG+GKSTL+ M AR    D
Sbjct: 115 ERNPPNPLARPPISEPIEVGVRVIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNAD 174

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREFIE  LG + L +S+VVVATSD+  ++R     TA  IAEYF  
Sbjct: 175 INVIALIGERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRD 234

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +V+ ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G      G I
Sbjct: 235 QGMDVMFMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTG--TNACGTI 292

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLVDGD+ N+PIAD+VR ILDGH+VL RSLA +G+YP ++ L SVSR+ +   S 
Sbjct: 293 TAFYTVLVDGDDMNEPIADTVRGILDGHLVLERSLANKGQYPAINVLKSVSRVMNHIISP 352

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + ++    L  L+  +  + D+  IG Y+ G    +D+A+   P I  F KQ   + +++
Sbjct: 353 EHRQAADKLRQLLSTYINSEDLINIGAYKRGSSKEIDEAIRYYPEIISFCKQDIDEKATK 412

Query: 428 D 428
           D
Sbjct: 413 D 413


>gi|34498451|ref|NP_902666.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
 gi|34104306|gb|AAQ60665.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
          Length = 437

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/342 (42%), Positives = 205/342 (59%), Gaps = 11/342 (3%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTP 157
           W GR++N LG+P+DG   LG GD  +   +  PP +N   ++ V+     G+R I+ F  
Sbjct: 98  WLGRIVNGLGEPLDGKGRLG-GDAPL---AAHPPQINPLKKKPVDTPLDVGVRAINGFLT 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           +  GQR+G+FAGSG+GKS LL M  R    + V++ L+GERGREVREF+E  LG + L K
Sbjct: 154 MGRGQRVGLFAGSGVGKSVLLGMITRHTEAEVVVVGLIGERGREVREFVEHALGAEGLAK 213

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +V+VVA +DESP++R  A     TIA ++  +G NVLL++DS+TR+A + RE+A   GE 
Sbjct: 214 AVLVVAPADESPLMRLKATELCHTIAAHYRDRGRNVLLLVDSLTRYAMAQREVALALGEP 273

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  RGYP SVF  LP L E  G  E   G+++A+ +VL +GD+  DP+ D+ R+ILDGHI
Sbjct: 274 PATRGYPPSVFGLLPSLAESAGNGEGGAGSMSAIYTVLAEGDDQQDPVVDTARAILDGHI 333

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP +D   SVSR   +   AD   +   L     R++E R +  +G Y 
Sbjct: 334 VLSRELAERGHYPAIDISRSVSRCMSQLIDADHAAVARELRGAWSRYQEVRGLLPLGAYV 393

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           PG D   D+A+   P I   L Q   D      + E   +LQ
Sbjct: 394 PGADPATDRALRLQPRIEALLCQ---DAGEAAPYAECLSRLQ 432


>gi|134297243|ref|YP_001120978.1| flagellar protein export ATPase FliI [Burkholderia vietnamiensis
           G4]
 gi|134140400|gb|ABO56143.1| flagellar protein export ATPase FliI [Burkholderia vietnamiensis
           G4]
          Length = 508

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 168 GRVVDASGRPLDGLGPLAAKVDAPLSAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 225

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 226 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 285

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 286 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 345

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 346 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 405

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 406 SLAEAGHYPAIDIEASISRAMTALIDEGHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 465

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 466 AQLDRAIALYPRIEAFLQQ 484


>gi|284007158|emb|CBA72440.1| flagellum-specific ATP synthase FliI [Arsenophonus nasoniae]
          Length = 463

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/346 (41%), Positives = 211/346 (60%), Gaps = 5/346 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           +F + P+    GRV++  G+P+DG  SL   D    +++     + R  +      G+R 
Sbjct: 111 QFPLGPA--LLGRVLDGFGEPLDGK-SLPTTDCHASLVTAPINPLQRAPINHPLDVGVRA 167

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG
Sbjct: 168 INSLLTVGRGQRMGLFAGSGVGKSMLLGMMARYTQADVIVVGLIGERGREVKDFIENILG 227

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            + L++SVV+ A +D SP+LR      A  IAE F  +G NVLLI+DS+TR+A + REIA
Sbjct: 228 PEGLQRSVVIAAPADVSPLLRLQGATYATRIAEDFRDRGLNVLLIMDSLTRYAMAQREIA 287

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              GE P  +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+
Sbjct: 288 LAIGEPPATKGYPPSVFAKLPTLIERAGNGIQGSGSITAFYTVLTEGDDQQDPIADSARA 347

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL+R+LAE G YP +D  AS+SR  +                L+ R++  +D+ 
Sbjct: 348 ILDGHIVLSRTLAESGHYPAIDIEASISRAMNSLVDKSHLYQAQQFKQLLSRYQRNQDLI 407

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435
            +G Y  G D ILD+A+   P +  FL+Q   +  S E  +Q++ +
Sbjct: 408 NVGAYAVGSDPILDQAIQLYPHLQQFLRQDCDEYCSKESAYQQLCQ 453


>gi|320529382|ref|ZP_08030470.1| flagellar protein export ATPase FliI [Selenomonas artemidis F0399]
 gi|320138348|gb|EFW30242.1| flagellar protein export ATPase FliI [Selenomonas artemidis F0399]
          Length = 458

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/373 (43%), Positives = 228/373 (61%), Gaps = 14/373 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127
           V + PVG  + I  G  V   GR  R+       GRV++ LG PIDG   +    L+ E 
Sbjct: 80  VLLMPVGEMQGIGPGCEVTATGRRLRVKVGEELLGRVLDGLGNPIDGKGPI----LTKEE 135

Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + +  P  ++R R+ +    G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+ 
Sbjct: 136 YPLQAPPPSPLSRPRIGENLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNT 195

Query: 186 CFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+LVGERGREVR+FIE  LG+  LK+SVVVVATSD+  ++R    +T   IAEY
Sbjct: 196 EADISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEY 255

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G S  E 
Sbjct: 256 FRDRGHKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--EH 313

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L SVSR+  + 
Sbjct: 314 GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEV 373

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  +    +  L+  + E  D+  IG Y  G    +D A+ ++  I DFL Q   ++
Sbjct: 374 VPKEHLEAAQEMRQLMAVYSEAEDLIHIGAYVKGSSPKIDAAIQKIEGINDFLCQDIFEV 433

Query: 425 SSEDVFQEITKKL 437
           +S   +++  ++L
Sbjct: 434 TS---YEDTERRL 443


>gi|323493125|ref|ZP_08098256.1| flagellum-specific ATP synthase FliI [Vibrio brasiliensis LMG
           20546]
 gi|323312596|gb|EGA65729.1| flagellum-specific ATP synthase FliI [Vibrio brasiliensis LMG
           20546]
          Length = 447

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/381 (39%), Positives = 228/381 (59%), Gaps = 5/381 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  I Y+ P+  +G   +   ++   G   +  S  W GRV+N LG+ +D   +
Sbjct: 66  AQVVGFDHTIAYLMPIRRLGGLFAGAKVIPLQGDSTVQLSDQWLGRVLNGLGEAMDDGPA 125

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G+      + + P + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+
Sbjct: 126 LQGGERVSLDPTPINP-LKRRPVDSPLNVGVRAINGLMTVGKGQRIGLMAGSGVGKSVLM 184

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
            M +++   D +++ L+GERGREVREFIE  L +   KK++++ A +DESP++R  A L 
Sbjct: 185 GMISQNTEADVIVVGLIGERGREVREFIERNLTEEARKKAIIIAAPADESPLMRLRATLL 244

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              ++EYF  KG +VLL++DS+TR+A + REIA + GE P +RGYP SVF+ LP+LLER 
Sbjct: 245 CHRVSEYFRDKGKDVLLMMDSLTRYAMAQREIALSLGEPPASRGYPPSVFNVLPQLLERA 304

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S  + G++TA+ ++L  GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  ASV
Sbjct: 305 GNSANQDGSLTAIYTILAAGDDQQDPVVDSARAILDGHVVLSRKLAEQGHYPAIDINASV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR            L S        + + +++  +GGY+PG D  LD++V   P +  +L
Sbjct: 365 SRCMTACSQPAHLTLASEFRKTYASYLQVKELLPLGGYQPGQDPELDRSVALYPQLVAYL 424

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           +QS     S D  Q +T+  Q
Sbjct: 425 QQSQH--CSVDYQQSLTELAQ 443


>gi|302185559|ref|ZP_07262232.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae
           642]
          Length = 452

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q   D  S
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434


>gi|107023998|ref|YP_622325.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia AU
           1054]
 gi|116691085|ref|YP_836708.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           HI2424]
 gi|105894187|gb|ABF77352.1| Flagellar protein export ATPase FliI [Burkholderia cenocepacia AU
           1054]
 gi|116649174|gb|ABK09815.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           HI2424]
          Length = 513

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 206/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 173 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 230

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396
           +LAE G YP +D  AS+SR    A +A  DE  L  V     ++ R++  RD+  +G Y 
Sbjct: 411 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 466

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
           PG D  LD+A+   P I  FL+Q
Sbjct: 467 PGRDAQLDRAIALYPRIEAFLQQ 489


>gi|71736661|ref|YP_275538.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557214|gb|AAZ36425.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320325117|gb|EFW81186.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329376|gb|EFW85369.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330986492|gb|EGH84595.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011067|gb|EGH91123.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 452

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q   D  S
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434


>gi|323143309|ref|ZP_08078000.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Succinatimonas hippei YIT 12066]
 gi|322416926|gb|EFY07569.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Succinatimonas hippei YIT 12066]
          Length = 438

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 161/386 (41%), Positives = 227/386 (58%), Gaps = 6/386 (1%)

Query: 53  GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGK 111
           G+N     +V+  + +   + P+G  E IS    V   G     P      GRV+N +G 
Sbjct: 53  GENWMLRAEVVGFSKNTALLTPLGDLEGISYHTEVIPTGHVLSVPVGEELLGRVLNGVGD 112

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
             DG  +L K      + +  P AM R+ +EK    G+RV+D       GQR+G+FA +G
Sbjct: 113 VADGGPAL-KTHKFYPVYADPPAAMQRKLIEKPVSLGLRVLDGVLTCGQGQRMGIFAAAG 171

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
            GKSTLLS   +    +  +++L+GERGREVREFIE  LG + +KK+V+VV+TSD S + 
Sbjct: 172 GGKSTLLSSIIKGTSAEICVLALIGERGREVREFIERDLGPEGMKKAVLVVSTSDRSSME 231

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R  A  TA  IAEYF  +G NVLL++DS+TRF  + REI   +GE P  RG+P SVFS L
Sbjct: 232 RLKAAYTATAIAEYFRDEGKNVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTL 291

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P+L+ER G S  +KG+ITA+ +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP 
Sbjct: 292 PKLMERAGNS--DKGSITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPA 349

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D LASVSR+ +   S + K     L  ++ ++ E   +  +G Y+ G D   D A+  +
Sbjct: 350 IDVLASVSRVMNTIVSKEHKAAAQKLRQILAKYSEIELLVQLGEYKKGNDAEADFALSHI 409

Query: 411 PIIYDFLKQSPSDLSS-EDVFQEITK 435
             +  FLKQ   + SS ED   ++ K
Sbjct: 410 DAVNKFLKQGLDEKSSFEDTVSQLLK 435


>gi|254785461|ref|YP_003072890.1| flagellum-specific ATP synthase [Teredinibacter turnerae T7901]
 gi|237687407|gb|ACR14671.1| flagellar protein export ATPase FliI [Teredinibacter turnerae
           T7901]
          Length = 480

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 141/319 (44%), Positives = 204/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR++N +G+P+DG   +  +  + +E  +  P  ++R  +++    GIR I+    +  G
Sbjct: 108 GRILNGVGQPLDGLGPVSCRAKVDLEPSTINP--LHRHPIDETLDVGIRAINSLLTVGKG 165

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAGSG+GKS LL M  R    D V++ L+GERGREV+EF++  LG   LKKSVVV
Sbjct: 166 QRIGLFAGSGVGKSVLLGMMTRFTTADVVVVGLIGERGREVKEFVDHILGPQGLKKSVVV 225

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D++P++R  A   A  IAEYF  +G NVLL++DS+TRFA + REI+   GE P  +
Sbjct: 226 AAPADDAPLMRLRASQLATRIAEYFRDQGKNVLLLMDSLTRFAQAQREISLAIGEPPATK 285

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF+++P L+ER G  +K  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 286 GYPPSVFAKIPDLVERAGNGDKGGGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSR 345

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE+G YP +D  AS+SR+      A+          L+ R+ E +D+  IG Y  G D
Sbjct: 346 QLAEQGIYPAIDIEASISRVMPNIVDANHLAAAQRFKQLLARYRENKDLIAIGAYARGSD 405

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             +D A+ + P +  F+ Q
Sbjct: 406 PQIDAAIERFPHLQQFIGQ 424


>gi|149194683|ref|ZP_01871778.1| flagellum-specific ATP synthase [Caminibacter mediatlanticus TB-2]
 gi|149135106|gb|EDM23587.1| flagellum-specific ATP synthase [Caminibacter mediatlanticus TB-2]
          Length = 430

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 161/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G+I  I       T L+  V  GD +V    N   LG V  +  +   I P    E + +
Sbjct: 19  GFIKKINPTNIIATGLNPSV--GD-IVEIKSNIPTLGMVTSVMENEFIITPFSFVEGMKI 75

Query: 84  GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V+      ++       GRV++   +PIDG   + K +    IM K    + R  + 
Sbjct: 76  GDRVYIDEEGMKVPVGEGLLGRVVDPFLRPIDGKGEI-KYETKYPIMRKPISPLQRGVIN 134

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           + F TG++ ID       GQ++G+FAGSG+GKSTL+SM  R    D  +I+L+GERGRE+
Sbjct: 135 EVFPTGVKAIDGLLTCGKGQKLGIFAGSGVGKSTLMSMIVRGSESDIKVIALIGERGREI 194

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            EFIE  L  +L  +V++VATSD+S ++RK    +A+ +AEYF  K  +VL ++DS+TRF
Sbjct: 195 PEFIEHNLKGDLTNTVIIVATSDDSALMRKYGAFSAMAVAEYFKDKNKDVLFLMDSVTRF 254

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN- 321
           A + REI    GE P ++GYP S    LP+L+ER G  EK KG+ITA  +VLV+GD+ + 
Sbjct: 255 AMAQREIGLAMGEPPTSKGYPPSAIMLLPQLMERAG-KEKNKGSITAFFTVLVEGDDTSA 313

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIAD  RSILDGHI+L+R L + G YPP++ L S SR+ +   + +  +       L  
Sbjct: 314 DPIADQARSILDGHILLDRELTDFGIYPPINILKSASRVMNNIVTPEHLQKAQKFKKLYA 373

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             +E   +  IG Y+ G D  LD+A+ +   + +FLKQ P+ L     F+ IT
Sbjct: 374 LLKENEVLIRIGAYQKGTDPELDEAIAKKEAMEEFLKQPPTALFK--FFETIT 424


>gi|71281978|ref|YP_268247.1| flagellum-specific ATP synthase [Colwellia psychrerythraea 34H]
 gi|71147718|gb|AAZ28191.1| flagellum-specific ATP synthase FliI [Colwellia psychrerythraea
           34H]
          Length = 449

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 156/367 (42%), Positives = 229/367 (62%), Gaps = 3/367 (0%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI 113
           + D L +V+    DI Y+ P      +  G  V     + ++  S    GRVIN +GKP+
Sbjct: 56  HGDLLAEVVGFAQDITYLMPEESLRGVMPGARVLPISSKAKVPLSMGLLGRVINGVGKPL 115

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    + K D      SK    ++R+ + +    G+R I+ F  +  GQR+G+FAGSG+G
Sbjct: 116 DSKGPI-KADNDYHHDSKPINPLSRRAITEVLDVGVRSINSFISVGKGQRMGLFAGSGVG 174

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           KS L+ M  R    D V++ LVGERGREV+EFIE+ LG+  LK++VVV A +D SP++R 
Sbjct: 175 KSVLMGMMTRGTTADVVVVGLVGERGREVKEFIEEILGEEGLKRAVVVAAPADNSPLMRL 234

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
               TAV I+EYF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVFS+LP+
Sbjct: 235 KGCETAVQISEYFRDQGLNVLLLLDSLTRYAQAQREIALAVGEPPATKGYPPSVFSKLPQ 294

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G   + +G+ITA  +VL +GD+  DP+AD+ R+ILDGH+VL+R LA+ G YP V+
Sbjct: 295 LVERAGNGGEGQGSITAFYTVLTEGDDLQDPVADAARAILDGHVVLSRELADAGHYPAVN 354

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              S+SR+     SAD ++L   L  +   +++ +D+  IG Y  G D  +D+A++ +P+
Sbjct: 355 IEGSISRVMPMVTSADHQELAKQLKQMYALYQQNKDLIAIGAYTKGNDPRIDQAINVLPV 414

Query: 413 IYDFLKQ 419
           I  FL+Q
Sbjct: 415 INFFLQQ 421


>gi|221215782|ref|ZP_03588741.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD1]
 gi|221164318|gb|EED96805.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD1]
          Length = 527

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 190 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 247

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 248 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 307

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 308 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 367

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 368 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 427

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 428 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 487

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 488 AQLDRAIALYPRIEAFLQQ 506


>gi|161526233|ref|YP_001581245.1| flagellar protein export ATPase FliI [Burkholderia multivorans ATCC
           17616]
 gi|160343662|gb|ABX16748.1| flagellar protein export ATPase FliI [Burkholderia multivorans ATCC
           17616]
          Length = 524

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 187 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 244

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 245 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 304

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 305 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 364

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 365 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 424

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 425 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 484

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 485 AQLDRAIALYPRIEAFLQQ 503


>gi|33600613|ref|NP_888173.1| type III secretion system ATPase [Bordetella bronchiseptica RB50]
 gi|33568212|emb|CAE32125.1| putative ATP synthase in type III secretion system [Bordetella
           bronchiseptica RB50]
          Length = 444

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 157/410 (38%), Positives = 236/410 (57%), Gaps = 16/410 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
            L ++G  +  + ++   V  + +   VCL   + + G++ +  G+V+    D   + P+
Sbjct: 20  TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130
           G    IS    V   GR  + P      GRV++ LG+P+D  +S   G L       + +
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAES---GPLHAHKFYPVFA 133

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +++L+GERGREVREF+E  LG +  +KSV+V ATSD+S + R  A   A  IAEYF  +G
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL ++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G ++   G+ITA
Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   
Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           K L   +  L+ ++++   +  IG Y+ G D   D+A+ ++  I  FL+Q
Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQ 421


>gi|300693817|ref|YP_003749790.1| type III secretion system atpase [Ralstonia solanacearum PSI07]
 gi|299075854|emb|CBJ35163.1| type III secretion system ATPase [Ralstonia solanacearum PSI07]
          Length = 439

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/371 (40%), Positives = 216/371 (58%), Gaps = 5/371 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G+V+  +     + P G    +S    V   GR   +       GRV++ LG+P DG   
Sbjct: 60  GEVVGFSEHFALVAPFGGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPP 119

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D  + + +  P  M R+ VE+   TG+RVID    L  GQR+G+FA +G+GKSTL+
Sbjct: 120 LEVVDY-VPVFANAPDPMTRRLVEQPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLM 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I L+GERGREVREFIE  LG + +++SVVV ATSD S + R  A   
Sbjct: 179 GMFARGTDCDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAYV 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 239 GTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S    G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L S+
Sbjct: 299 GMS--AAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSL 356

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +    +       +  L+ ++ E   +  +G Y+ G D + D AV     +  FL
Sbjct: 357 SRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMESFL 416

Query: 418 KQSPSDLSSED 428
           +Q   +  S D
Sbjct: 417 RQRTDEWCSPD 427


>gi|262273537|ref|ZP_06051351.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
 gi|262222515|gb|EEY73826.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
          Length = 413

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 142/334 (42%), Positives = 208/334 (62%), Gaps = 6/334 (1%)

Query: 90  WGRFRISPSACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKT 147
           +G  +I       GRV+N LG+P+D   SLG    +  + +       + RQ +      
Sbjct: 62  FGDSKIPVGPNLLGRVLNGLGEPLD---SLGPLCCEQRVPLQGDTINPLKRQPITHQLDV 118

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+R I+    +  GQR+G+FAGSG+GKS LL M  R+   +  ++ L+GERGREVREFIE
Sbjct: 119 GVRAINTMLSVGKGQRLGLFAGSGVGKSVLLGMMTRNTSAEITVVGLIGERGREVREFIE 178

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
             LG+  ++ +VV+ + +D+ P++R  A +    IAEYF  +G +VLL++DS+TR+A + 
Sbjct: 179 HSLGEEGMRNAVVIASPADDPPLMRLRASVLCHRIAEYFRDQGKDVLLLMDSLTRYAQAQ 238

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA + GE P  +GYP SVFS LP+L+ER G    + G+ITA  +VL +GD+  DPIAD
Sbjct: 239 REIALSVGEPPATKGYPPSVFSLLPQLVERAGNGASDGGSITAFYTVLSEGDDQQDPIAD 298

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGHIVLNR+LAE+G YP +D   S+SR   +  SA+  K    +  L  R+ + 
Sbjct: 299 AARAILDGHIVLNRALAEQGHYPAIDIEQSISRAMPQIVSAEHLKRAQRVKQLYARYRQV 358

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +++  +GGY+ G D  LD AV   P I  FL+Q+
Sbjct: 359 QELISLGGYQQGADHELDLAVQAYPSICQFLQQT 392


>gi|90406816|ref|ZP_01215008.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3]
 gi|90312053|gb|EAS40146.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3]
          Length = 443

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 205/318 (64%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ +GKPIDG   +     S    + + P ++R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVLDGIGKPIDGKGDIVTAQTSNYTHASINP-LSRKAITEPLDVGIKAINALLTVGQGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFIED LG+   K++VV+ 
Sbjct: 161 RMGLFAGSGVGKSVLLGMMTRGTNADVVVVGLIGERGREVKEFIEDILGEEGRKRAVVIA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     T++TIAEYF  +G NVLL++DS+TRFA + REIA   GE P  +G
Sbjct: 221 APADASPLMRLKGCETSLTIAEYFRDQGLNVLLLMDSLTRFAQAQREIALAIGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G   + +G+I+A  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGNENQGSISAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G +P +D   S+SR+     S + + L   L    + ++E +++  IG Y  G D 
Sbjct: 341 LADSGHFPAIDVGKSISRVMPMVTSEEHQTLARVLKQAYNLYQENKELITIGAYAKGSDP 400

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +DKA+   P +  FL+Q
Sbjct: 401 RIDKAIIIRPKLDHFLQQ 418


>gi|189349053|ref|YP_001944681.1| flagellum-specific ATP synthase [Burkholderia multivorans ATCC
           17616]
 gi|189333075|dbj|BAG42145.1| flagellum-specific ATP synthase [Burkholderia multivorans ATCC
           17616]
          Length = 523

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 186 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 243

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 244 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 303

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 304 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 363

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 364 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 423

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 424 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 483

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 484 AQLDRAIALYPRIEAFLQQ 502


>gi|70729033|ref|YP_258767.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf-5]
 gi|68343332|gb|AAY90938.1| flagellum-specific ATP synthase FliI [Pseudomonas fluorescens Pf-5]
          Length = 452

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 149/356 (41%), Positives = 212/356 (59%), Gaps = 3/356 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+ +DG  ++   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGAMRAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVISP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           D          L  R+++ RD+  +G Y  G D   D A+   P +  +L+Q  +D
Sbjct: 376 DNMARAQYFKQLWSRYQQARDLISVGAYVAGGDRDTDTAISLHPAMVAYLRQGLND 431


>gi|170696754|ref|ZP_02887866.1| flagellar protein export ATPase FliI [Burkholderia graminis C4D1M]
 gi|170138333|gb|EDT06549.1| flagellar protein export ATPase FliI [Burkholderia graminis C4D1M]
          Length = 555

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%)

Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           W   GRV++A G+P+DG   LG      LS  +++     +NR+ + K    G+R I+  
Sbjct: 212 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 267

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214
             +  GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L
Sbjct: 268 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 327

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            +SVV+ A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   G
Sbjct: 328 ARSVVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 387

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 388 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 447

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+RSLAE G YP +D  AS+SR        +          ++ R++  RD+  +G 
Sbjct: 448 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGA 507

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D +LD+A+   P +  FL+Q
Sbjct: 508 YSSGRDALLDRAIALYPRMEAFLQQ 532


>gi|117620954|ref|YP_855907.1| flagellum-specific ATP synthase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562361|gb|ABK39309.1| flagellar protein export ATPase FliI [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 443

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 203/320 (63%), Gaps = 2/320 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+ +G+P+DG   +           ++ P ++R+ + +    G+R I+    +  
Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFIE+ LG+  + +SVV
Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEEILGEEGRARSVV 219

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR+A + REIA   GE P  
Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+
Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA+ G YP +D   S+SR+     S +  +L  +L      +++ RD+  IG Y  G 
Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPEHMELARTLKQFYSLYQQNRDLITIGAYSQGS 399

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D  +D+A+ Q P +  FL+Q
Sbjct: 400 DPRIDRAIIQKPYLDQFLQQ 419


>gi|118592622|ref|ZP_01550012.1| type III secretion system ATPase [Stappia aggregata IAM 12614]
 gi|118434673|gb|EAV41324.1| type III secretion system ATPase [Stappia aggregata IAM 12614]
          Length = 460

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/407 (39%), Positives = 239/407 (58%), Gaps = 8/407 (1%)

Query: 17  KNLVVQGGYISSI--TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KNL    G +S +  T VY  V+ +     +  +    G+  +   +V+    +   + P
Sbjct: 38  KNLYSVNGKVSKVIGTVVYAVVSNVRIGEIVELYTRSTGRKLE--AEVVGFANNEALLYP 95

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
            G  + +S    V   G+ +  P      GRVI+  G  IDG            +  K P
Sbjct: 96  FGETQGVSPQTEVRPTGKVQSVPVGEHLLGRVIDGFGNFIDGKSDECCPQTFYPVYQKPP 155

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M R+ ++    TGIR ID    L  GQRIG+FA +G+GKSTLLSM  ++   D  +++
Sbjct: 156 NPMTRRVIDAPVTTGIRAIDGLLTLGEGQRIGIFAAAGVGKSTLLSMLVKNADVDVTVMA 215

Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           +VGERGREV+EFIE  LG + +K++V+VV+TSD+SP+ R  A   A  +AEYF  +G  V
Sbjct: 216 MVGERGREVKEFIERELGQEGMKRTVLVVSTSDKSPMERVKASYAATAVAEYFRDQGKKV 275

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L ++DS+TRFA ++REI   +GELP  RG+P SVF+ LP+LLER+G +  +KG+ITA+ +
Sbjct: 276 LFLMDSVTRFARALREIGLAAGELPTRRGFPPSVFASLPKLLERVGMN--DKGSITAMYT 333

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+P+AD  RSILDGHI+L+  LA    +P +D L S SR+ D   S + ++L
Sbjct: 334 VLVEGDDMNEPVADETRSILDGHIILSSKLAAAHHFPAIDILNSKSRVMDMVISDEHREL 393

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   +L+  + +   +  IG Y+ G D + D AV ++  I +FL+Q
Sbjct: 394 AAITRNLLAAYSDVELLVKIGEYQAGSDPVADLAVAKIQDINEFLRQ 440


>gi|170734419|ref|YP_001766366.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           MC0-3]
 gi|169817661|gb|ACA92244.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           MC0-3]
          Length = 514

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 206/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 174 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 231

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 232 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 291

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 292 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 351

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 352 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 411

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396
           +LAE G YP +D  AS+SR    A +A  DE  L  V     ++ R++  RD+  +G Y 
Sbjct: 412 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 467

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
           PG D  LD+A+   P I  FL+Q
Sbjct: 468 PGRDAQLDRAIALYPRIEAFLQQ 490


>gi|254246922|ref|ZP_04940243.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184]
 gi|124871698|gb|EAY63414.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184]
          Length = 514

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 206/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 174 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 231

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 232 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 291

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 292 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 351

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 352 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 411

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396
           +LAE G YP +D  AS+SR    A +A  DE  L  V     ++ R++  RD+  +G Y 
Sbjct: 412 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 467

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
           PG D  LD+A+   P I  FL+Q
Sbjct: 468 PGRDAQLDRAIALYPRIEAFLQQ 490


>gi|54297670|ref|YP_124039.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Paris]
 gi|53751455|emb|CAH12873.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Paris]
          Length = 449

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 151/361 (41%), Positives = 223/361 (61%), Gaps = 3/361 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + VY+  +G  + I+ G  +   GR  ++S      GR++N  G  ID D   
Sbjct: 63  EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPP 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL 
Sbjct: 122 SEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIE  LG   LK++VVV A +DESP++R      A
Sbjct: 182 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLQGLKRAVVVAAPADESPLMRLHGAKVA 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G
Sbjct: 242 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+S
Sbjct: 302 NGTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L 
Sbjct: 362 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|220929465|ref|YP_002506374.1| ATPase FliI/YscN [Clostridium cellulolyticum H10]
 gi|219999793|gb|ACL76394.1| ATPase FliI/YscN [Clostridium cellulolyticum H10]
          Length = 437

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/419 (38%), Positives = 244/419 (58%), Gaps = 8/419 (1%)

Query: 25  YISSITSVY-YTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           YI  ++ V   T+      V +GD   +H    S    +V+    + V + P+G    I 
Sbjct: 21  YIGKVSKVVGLTIESDGPQVSIGDLCNIHIIGGSKLKAEVVGFKDEKVLLMPLGEMTGIG 80

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   +++      GRV++ LG PID   SL +     +  +K P  + R+R+
Sbjct: 81  PGSTVSANGDILKVAVGPQLVGRVLDGLGNPIDDKGSL-QSKHYYKTDNKPPNPLTRKRI 139

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+L+GERGRE
Sbjct: 140 SEPLPLGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMVARNTKADINVIALIGERGRE 199

Query: 202 VREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E D   + L +SVVVVATSD+  ++R    + A  IAEYF   G +VLL++DS+T
Sbjct: 200 VREFLERDLTDEGLARSVVVVATSDQPALIRLKGAMVATAIAEYFRDCGKDVLLLMDSLT 259

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + RE+  + GE PV+RGY  SVFS  P+LLER G S  +KG+IT + +VLVDGD+ 
Sbjct: 260 RYAMAQREVGLSIGEPPVSRGYTPSVFSVFPKLLERAGTS--DKGSITGLYTVLVDGDDL 317

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            +P+ D+ R ILDGHIVL+RS+A +  YP +D LASVSR+       + KK  + +  ++
Sbjct: 318 TEPVTDTARGILDGHIVLSRSMANKNHYPAIDVLASVSRVMGDIIDKEHKKSANEIKKVM 377

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
               ++ D+  IG Y  G +  +D A+  +  I  FL+Q   + +S ED+  ++   L+
Sbjct: 378 AVHRDSEDLINIGAYVKGSNEKIDYAIECIEDITSFLQQETDEKVSFEDIHSQVLSLLK 436


>gi|89056690|ref|YP_512141.1| ATPase FliI/YscN [Jannaschia sp. CCS1]
 gi|88866239|gb|ABD57116.1| H+-transporting two-sector ATPase flagellum-specific [Jannaschia
           sp. CCS1]
          Length = 440

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 151/386 (39%), Positives = 221/386 (57%), Gaps = 5/386 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G IS++     +V+ L +   LGD V     N+D  G+++ +      + P G  + + L
Sbjct: 22  GKISAMGRDVVSVSGLDRVASLGDRVRF---NADATGEILAMEAGRARVMPDGPADGLRL 78

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           G  V H G   ISP   W GRVI+  G+P+DG   L  G ++  ++S  P    R+ +  
Sbjct: 79  GADVTHLGPASISPDDSWLGRVIDPDGQPLDGRAIL-PGPVAYPLVSPPPSPAARRGLGA 137

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
             +TG  V D   P+  GQR+G+FAGSG+GKS L +  A     D V+I L+GERGREVR
Sbjct: 138 RLQTGFAVFDTLLPIVRGQRVGLFAGSGVGKSRLTAALADGMAADVVVIGLIGERGREVR 197

Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           +F+ + LG + L +SVV+ ATSD   + R  A  T + +AE+F ++G NV+++ DSITRF
Sbjct: 198 DFVSETLGPEGLARSVVIAATSDRPALTRARAAYTMMAVAEFFRNQGRNVIVLADSITRF 257

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + R++A  +GE     G+P S+   +  L ER GP    +G+ITA+ SVLV G + + 
Sbjct: 258 AEAQRDVAAAAGEPFGPSGFPASMAQTIMALAERAGPGSGTQGDITAIFSVLVAGSDMDG 317

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+AD +R  LDGHIVL R +AE GRYP +D L SVSR    A S +E +++     L+  
Sbjct: 318 PVADVMRGTLDGHIVLTREIAERGRYPAIDLLRSVSRSLPNAASDEENRMILRARQLMGA 377

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVH 408
           ++    +   G Y PG D + D AV 
Sbjct: 378 YDRAEMMLQAGLYTPGADPLTDGAVK 403


>gi|167579436|ref|ZP_02372310.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           TXDOH]
          Length = 521

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 181 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 238

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 239 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 298

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 299 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 358

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 359 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 418

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR           + V     ++ R++  RD+  +G Y PG D
Sbjct: 419 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 478

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 479 AQLDRAIALYPRIESFLQQ 497


>gi|150019077|ref|YP_001311331.1| flagellar protein export ATPase FliI [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905542|gb|ABR36375.1| flagellar protein export ATPase FliI [Clostridium beijerinckii
           NCIMB 8052]
          Length = 438

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 151/325 (46%), Positives = 207/325 (63%), Gaps = 4/325 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G +I+ LG P+D D S+        + +  P  + R+R+++   TG+R ID F     GQ
Sbjct: 104 GHIIDGLGNPLDCD-SISMDGEEYPLENDAPDPLKRKRIKEIMPTGVRAIDGFLTCGDGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKST L M AR    D  +ISL+GERGREV EFIE  LG + +KKSVVV 
Sbjct: 163 RIGIFAGSGVGKSTTLGMIAREAKADVNVISLIGERGREVLEFIEKDLGPEGMKKSVVVC 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R    LTA  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +G
Sbjct: 223 ATSDKPALIRIKGALTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF++LP+L+ER G S    G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RS
Sbjct: 283 YTPSVFAKLPKLMERSGTSAD--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRS 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA +  YP +D L SVSRL +     + K+  S    L+  ++++ D+  IG Y  G + 
Sbjct: 341 LAHKNHYPAIDILNSVSRLMNTIAPKEHKEAASMARDLLATYKDSEDLINIGAYVKGSNK 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
            +D A++    + DFL Q   + +S
Sbjct: 401 KIDMAINYNDSLNDFLCQGIDERTS 425


>gi|221201936|ref|ZP_03574973.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2M]
 gi|221207557|ref|ZP_03580565.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2]
 gi|221172403|gb|EEE04842.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2]
 gi|221178356|gb|EEE10766.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2M]
          Length = 527

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 190 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 247

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 248 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 307

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 308 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 367

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 368 GYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 427

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 428 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 487

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 488 AQLDRAIALYPRIEAFLQQ 506


>gi|153836244|ref|ZP_01988911.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ3810]
 gi|149750519|gb|EDM61264.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ3810]
          Length = 440

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG D + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    D +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPGIDVLRSASRVMNQIVEPDHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PSDL
Sbjct: 371 ASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDL 427


>gi|254228246|ref|ZP_04921675.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio sp. Ex25]
 gi|262394137|ref|YP_003285991.1| Type III secretion cytoplasmic ATP synthase [Vibrio sp. Ex25]
 gi|151939319|gb|EDN58148.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio sp. Ex25]
 gi|262337731|gb|ACY51526.1| Type III secretion cytoplasmic ATP synthase [Vibrio sp. Ex25]
          Length = 440

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/357 (42%), Positives = 211/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G  ++ LG+P DG  S  +      +   
Sbjct: 88  VSPMGKMHEVGVGDQLL--------------GTTLDGLGRPFDGTQSQ-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + KSV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    D +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PSDL
Sbjct: 371 ASAAHLREMLAKYEEVELLLKIGEYQHGADSRADMAIAQSDDIRAFLRQGTHEPSDL 427


>gi|330976000|gb|EGH76066.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 452

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/352 (42%), Positives = 210/352 (59%), Gaps = 3/352 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISRPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQ 427


>gi|298487832|ref|ZP_07005872.1| Flagellum-specific ATP synthase fliI [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157557|gb|EFH98637.1| Flagellum-specific ATP synthase fliI [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 457

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/352 (42%), Positives = 210/352 (59%), Gaps = 3/352 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQ 427


>gi|330972439|gb|EGH72505.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 343

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 141/319 (44%), Positives = 200/319 (62%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P+DG   +   D        + P + R  + +    GIR I+    +  GQ
Sbjct: 2   GRVLDGAGRPLDGRSPIKAEDWVPMDGPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQ 60

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAG+G+GKS LL M  R    D +++ L+GERGREV+EFIE  LG+  LK+SVVV 
Sbjct: 61  RLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVA 120

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           + +D++P++R  A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +G
Sbjct: 121 SPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKG 180

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP+L+ER G +EK  G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R 
Sbjct: 181 YPPSVFARLPKLVERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRR 240

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAEEG YP +D  AS+SR+     S +          L  R+++TRD+  +G Y  G D 
Sbjct: 241 LAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDR 300

Query: 402 ILDKAVHQVPIIYDFLKQS 420
             D A+   P++  + +Q+
Sbjct: 301 ETDMAIALHPVLVRYQRQA 319


>gi|91224474|ref|ZP_01259736.1| type III secretion system ATPase [Vibrio alginolyticus 12G01]
 gi|91190816|gb|EAS77083.1| type III secretion system ATPase [Vibrio alginolyticus 12G01]
          Length = 440

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G  ++ LG+P DG  S  +      +   
Sbjct: 88  VSPMGKMHEVGVGDHLL--------------GTTLDGLGRPFDGTQSQ-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAEVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + KSV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    D +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D + D A+ Q   I  FL+Q    PSDL
Sbjct: 371 ASAAHIREMLAKYEEVELLIKIGEYQHGADSLADMAIAQSDDIRAFLRQGTHEPSDL 427


>gi|83719073|ref|YP_440755.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
 gi|257140596|ref|ZP_05588858.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
 gi|83652898|gb|ABC36961.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
          Length = 509

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 169 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 226

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 227 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 286

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 287 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 346

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 347 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 406

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR           + V     ++ R++  RD+  +G Y PG D
Sbjct: 407 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 466

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 467 AQLDRAIALYPRIESFLQQ 485


>gi|323527695|ref|YP_004229848.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1001]
 gi|323384697|gb|ADX56788.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1001]
          Length = 565

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 142/322 (44%), Positives = 201/322 (62%), Gaps = 4/322 (1%)

Query: 101 W--CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           W   GRV++A G+P+DG   LG       + + V   +NR+ + K    G+R I+    +
Sbjct: 222 WELLGRVLDASGRPLDGLGPLG-AQTDAPLSAPVINPLNREPIHKVLDVGVRAINALLTV 280

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKS 217
             GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L +S
Sbjct: 281 GRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARS 340

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VV+ A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P
Sbjct: 341 VVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPP 400

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIV
Sbjct: 401 ATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIV 460

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+RSLAE G YP +D  AS+SR        +          ++ R++  RD+  +G Y  
Sbjct: 461 LSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGAYSS 520

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
           G D +LD+A+   P +  FL+Q
Sbjct: 521 GRDALLDRAIALYPRMEAFLQQ 542


>gi|312111676|ref|YP_003989992.1| ATPase, FliI/YscN family [Geobacillus sp. Y4.1MC1]
 gi|311216777|gb|ADP75381.1| ATPase, FliI/YscN family [Geobacillus sp. Y4.1MC1]
          Length = 426

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 154/361 (42%), Positives = 219/361 (60%), Gaps = 5/361 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P    + IS G +V   G+  +I       G+V+++LG P+DG   L KG   + I
Sbjct: 56  VLLMPFSTVQHISPGCIVEATGKPLQIRVGFPLIGKVLDSLGYPLDGS-PLSKGLQPISI 114

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  + R  + +  + G+RVID    +  GQR+G+FAGSG+GKSTL+ M AR    D
Sbjct: 115 ERNPPNPLARPPISEPIEVGVRVIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNAD 174

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREFIE  LG + L +S+VVVATSD+  ++R     TA  IAEYF  
Sbjct: 175 INVIALIGERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRD 234

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +V+ ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G      G I
Sbjct: 235 QGMDVMFMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTG--TNACGTI 292

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLVDGD+ N+PIAD+VR ILDGH VL RSLA +G+YP ++ L SVSR+ +   S 
Sbjct: 293 TAFYTVLVDGDDMNEPIADTVRGILDGHFVLERSLANKGQYPAINVLKSVSRVMNHIISP 352

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + ++    L  L+  +  + D+  IG Y+ G    +D+A+   P I  F KQ   + +++
Sbjct: 353 EHRQAADKLRQLLSTYINSEDLINIGAYKRGSSKEIDEAIRYYPEIISFCKQDIDEKATK 412

Query: 428 D 428
           D
Sbjct: 413 D 413


>gi|182418359|ref|ZP_02949654.1| flagellar protein export ATPase FliI [Clostridium butyricum 5521]
 gi|237666511|ref|ZP_04526496.1| flagellar protein export ATPase FliI [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377741|gb|EDT75285.1| flagellar protein export ATPase FliI [Clostridium butyricum 5521]
 gi|237657710|gb|EEP55265.1| flagellar protein export ATPase FliI [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 438

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 210/331 (63%), Gaps = 4/331 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G +I+ LGKP+D +     GD    + ++ P  M R+R+++   TG+R ID F  +  GQ
Sbjct: 104 GHIIDGLGKPLDCESLEYDGD-DYPLENEAPDPMKRKRIKEIMPTGVRAIDGFLTVGDGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKST L M AR    D  +ISL+GERGREV EF+E  LG + +KKSVVV 
Sbjct: 163 RIGIFAGSGVGKSTTLGMIAREAKADVNVISLIGERGREVLEFMEKDLGPEGMKKSVVVC 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R    LTA  IAEYF  +G  V+L++DS+TR+A + RE+    GE P  +G
Sbjct: 223 ATSDKPALIRMKGALTATAIAEYFRDQGKKVILMMDSVTRYAMAQREVGLAIGEPPATKG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF++LP+L+ER G S    G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R 
Sbjct: 283 YTPSVFAKLPKLMERAGTS--MDGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRD 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA +  YP +D L SVSRL  +    D K   S    L+  ++++ D+  IG Y  G + 
Sbjct: 341 LAHKNHYPAIDVLNSVSRLMSQIAPKDHKDSASLARDLLATYKDSEDLINIGAYVKGSNK 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            +D AV     + +FL Q   + +S D  Q+
Sbjct: 401 KIDMAVAYNDKLNNFLCQGIDEKTSFDETQQ 431


>gi|91785614|ref|YP_560820.1| ATPase FliI/YscN [Burkholderia xenovorans LB400]
 gi|91689568|gb|ABE32768.1| ATPase FliI/YscN [Burkholderia xenovorans LB400]
          Length = 552

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 204/325 (62%), Gaps = 10/325 (3%)

Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           W   GRV++A G+P+DG   LG      LS  +++     +NR+ + K    G+R I+  
Sbjct: 209 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 264

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214
             +  GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L
Sbjct: 265 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 324

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            +SVV+ A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   G
Sbjct: 325 ARSVVIAAPADVSPLLRMQAASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 384

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 385 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 444

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+RSLAE G YP +D  AS+SR        +  +       ++ R++  RD+  +G 
Sbjct: 445 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLEKTRMFKQMLSRYQRNRDLINVGA 504

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D +LD+A+   P +  FL+Q
Sbjct: 505 YSSGRDALLDRAIALYPRMEAFLQQ 529


>gi|74101650|gb|AAZ99740.1| FliIL [Aeromonas hydrophila]
          Length = 443

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 157/382 (41%), Positives = 227/382 (59%), Gaps = 6/382 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117
           L +V+  N DI Y+ P+     +  G  V    G   I       GRV++ L +P+DG  
Sbjct: 60  LAEVVGFNRDISYLMPLQPMSGLYAGARVLPIDGEETIQVGEHLLGRVVDGLLQPLDGRP 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G+  + + +  P  + R  V +    GIR I+    +  GQR+G+FAGSG+GKS L
Sbjct: 120 LRDDGE-RVALFASPPNPLLRTPVREPLDVGIRAINGLLTVGKGQRLGLFAGSGVGKSML 178

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M  R+     V++ L+GERGREVREFIE  LG + L ++VVV A +D+SP++R  A  
Sbjct: 179 LGMMTRNTTAQIVVVGLIGERGREVREFIEHSLGPEGLARAVVVAAPADQSPLMRLRAAQ 238

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAEYF  +G +VLL++DS+TR+A + REIA   GE P  RGYP SVFS L +L+ER
Sbjct: 239 LCHRIAEYFREQGRDVLLLMDSLTRYAQAQREIALAIGEPPATRGYPPSVFSMLTQLVER 298

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G      G+++A  +VL +GD+  DP+ D+ R+ILDGHIVL R LAEEG YP +D  AS
Sbjct: 299 AGNGTHPDGSLSAFYTVLAEGDDQQDPVVDAARAILDGHIVLTRRLAEEGHYPAIDIGAS 358

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  +   A+ + L  +L  L  R+++ R++  +GGY+PG D  +D+AV + P I  F
Sbjct: 359 VSRVMPQVVPAEWQTLAVTLRQLWGRYQQVRELLPLGGYQPGADPQMDEAVQRYPAIAAF 418

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L+Q    +  E  F ++   L+
Sbjct: 419 LQQG---IHEETPFAQVMTGLK 437


>gi|311030127|ref|ZP_07708217.1| flagellum-specific ATP synthase [Bacillus sp. m3-13]
          Length = 437

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 146/339 (43%), Positives = 216/339 (63%), Gaps = 6/339 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           G+V++ALGKP++ ++ L  G L      + PP  M R  + +  + G++VID    +  G
Sbjct: 102 GKVLDALGKPLNQEEELPVG-LGKYPTDQAPPNPMTRPSITEELEVGVKVIDGLLTVGKG 160

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKSTLL M AR+   D  +I+L+GERGREVR+F+E  LG + L +S+V+
Sbjct: 161 QRVGIFAGSGVGKSTLLGMIARNTHADINVIALIGERGREVRDFLERDLGPEGLSRSIVI 220

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           VATSD+  ++R     TA  I+EYF   G NV+L++DS+TR A + RE+    GE P  +
Sbjct: 221 VATSDQPALMRIKGAYTATAISEYFRDMGYNVMLMMDSVTRVAMAQREVGLAVGEPPTTK 280

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  SVFS LP+LLER G ++   G+ITA  +VLVDGD+ N+PIAD+VR ILDGH VL+R
Sbjct: 281 GYTPSVFSMLPKLLERTGTNQH--GSITAFYTVLVDGDDMNEPIADTVRGILDGHFVLDR 338

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LA +G+YP ++ L SVSR+ +     + K+   S+   + ++ +  D+  IG Y+ G  
Sbjct: 339 DLANKGQYPAINVLKSVSRVMNHIVDNEHKRAAESMREKLSKYYQAEDLINIGAYKRGSS 398

Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
             +D A+   P I ++LKQ   D     D  +E+T  ++
Sbjct: 399 REIDDAIQSYPAIINYLKQEVDDSWKFTDTKKELTNLMK 437


>gi|238782824|ref|ZP_04626853.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
 gi|238716247|gb|EEQ08230.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
          Length = 424

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 225/380 (59%), Gaps = 14/380 (3%)

Query: 51  HQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW---------GRFRISPSAC 100
           ++G  +D +  +V+  N +I+Y+ P+   + I  G  V+ +          +  + P   
Sbjct: 21  NRGNGTDKIESEVVGFNGEILYLMPLENVDGILPGARVYAFESGAGITKGKQLPLGPE-- 78

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV++A  +P+DG    G           V P + R  ++     G+R I+    +  
Sbjct: 79  LLGRVLDASARPLDGLPPPGCAKHGSLFTQPVNPLL-RDPIKHVLDVGVRAINGLLTVGR 137

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG+  + +SVV
Sbjct: 138 GQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGEEGRTRSVV 197

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           + A +D SPILR    + A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  
Sbjct: 198 IAAPADVSPILRMQGAVYATRIAEDFRDRGMDVLLIMDSLTRYAMAQREIALAIGEPPAT 257

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G   KE G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+
Sbjct: 258 KGYPPSVFAKLPALVERAGNGVKEGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLS 317

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D  AS+SR   +   A   K V S   L+  ++  RD+  +G Y  G 
Sbjct: 318 RRLAESGHYPAIDIEASISRAMTELIDATHYKKVQSFKQLLSSYQRNRDLVSVGAYAAGS 377

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D +LDKA+   P +  FL+Q
Sbjct: 378 DPLLDKAIRLYPDMERFLQQ 397


>gi|299069237|emb|CBJ40497.1| type III secretion system ATPase [Ralstonia solanacearum CMR15]
          Length = 439

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 144/336 (42%), Positives = 207/336 (61%), Gaps = 4/336 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P DG   L   D  + + +  P  M R+ VE    TG+RVID    L  GQ
Sbjct: 104 GRVLDGLGRPADGGPPLEVVDY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FA +G+GKSTL+ MFAR    D  +I L+GERGREVREFIE  LG + +++SVVV 
Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTDCDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD S + R  A      +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 223 ATSDRSAVERAKAAYVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+ELPRLLER G S    G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R 
Sbjct: 283 FPPSVFAELPRLLERAGMS--AAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   RYP +D L+S+SR+  +    +       +  L+ ++ E   +  +G Y+ G D 
Sbjct: 341 IAARNRYPAIDILSSLSRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           + D AV     +  FL+Q   +  S D  + + +++
Sbjct: 401 VADAAVQWNDWMESFLRQRTDEWCSPDETRRLLEEI 436


>gi|39995521|ref|NP_951472.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA]
 gi|39982284|gb|AAR33745.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA]
          Length = 441

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 157/389 (40%), Positives = 226/389 (58%), Gaps = 6/389 (1%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVIN 107
           +VH         +V+    +   + P+G    + LG L+     +  +       GRVI+
Sbjct: 47  LVHPNDGDPIPAEVVGFRDNKTLLMPLGELRGVGLGSLISVKRKKASLGVGPGLLGRVID 106

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG PID    L   +      + V P M R+ + +    GIR I+       GQR+G+ 
Sbjct: 107 GLGVPIDDKGPLAIREEYPIYANPVNP-MKRRPIRQPLDLGIRAINALLTCGEGQRVGIM 165

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDE 226
           AGSG+GKSTLL M AR    D  +I+L+GERGRE+REFIE D   + LKKSVVVVATSD+
Sbjct: 166 AGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQ 225

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            P++R      A TIAEYF ++G  VLL++DS TRFA ++RE+    GE P  +GY  SV
Sbjct: 226 PPLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSV 285

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LP+LLER G      G+IT + +VLV+GD+ N+PI+D++RSILDGHIVLNR LA   
Sbjct: 286 FAALPKLLERTG--SFLDGSITGLYTVLVEGDDFNEPISDAMRSILDGHIVLNRELAARA 343

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YPP+D LAS SR+ +      +++  S    L+  + +  D+  IG Y+PG +  +D A
Sbjct: 344 IYPPLDILASASRVMNDVTERSQQQFASRFKELLAAYRQAEDLINIGAYKPGSNPTIDYA 403

Query: 407 VHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
           + ++  + +F++Q   D +S E    E+ 
Sbjct: 404 IAKMDGMINFIRQGIHDGVSMEQSIAELA 432


>gi|307731345|ref|YP_003908569.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1003]
 gi|307585880|gb|ADN59278.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1003]
          Length = 576

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%)

Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           W   GRV++A G+P+DG   LG      LS  +++     +NR+ + K    G+R I+  
Sbjct: 233 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 288

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214
             +  GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L
Sbjct: 289 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 348

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            +SVV+ A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   G
Sbjct: 349 ARSVVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 408

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 409 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 468

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+RSLAE G YP +D  AS+SR        +          ++ R++  RD+  +G 
Sbjct: 469 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGA 528

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D +LD+A+   P +  FL+Q
Sbjct: 529 YSSGRDALLDRAIALYPRMEAFLQQ 553


>gi|296157435|ref|ZP_06840270.1| flagellar protein export ATPase FliI [Burkholderia sp. Ch1-1]
 gi|295892207|gb|EFG71990.1| flagellar protein export ATPase FliI [Burkholderia sp. Ch1-1]
          Length = 552

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 204/325 (62%), Gaps = 10/325 (3%)

Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           W   GRV++A G+P+DG   LG      LS  +++     +NR+ + K    G+R I+  
Sbjct: 209 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 264

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214
             +  GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L
Sbjct: 265 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 324

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            +SVV+ A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   G
Sbjct: 325 ARSVVIAAPADVSPLLRMQAASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 384

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 385 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 444

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+RSLAE G YP +D  AS+SR        +  +       ++ R++  RD+  +G 
Sbjct: 445 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLEKTRMFKQMLSRYQRNRDLINVGA 504

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D +LD+A+   P +  FL+Q
Sbjct: 505 YSSGRDALLDRAIALYPRMEAFLQQ 529


>gi|298504521|gb|ADI83244.1| flagellum-specific ATPase FliI [Geobacter sulfurreducens KN400]
          Length = 441

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 157/389 (40%), Positives = 226/389 (58%), Gaps = 6/389 (1%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVIN 107
           +VH         +V+    +   + P+G    + LG L+     +  +       GRVI+
Sbjct: 47  LVHPNDGDPIPAEVVGFRDNKTLLMPLGELRGVGLGSLISVKRKKASLGVGPGLLGRVID 106

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG PID    L   +      + V P M R+ + +    GIR I+       GQR+G+ 
Sbjct: 107 GLGVPIDDKGPLAIREEYPIYANPVNP-MKRRPIRQPLDLGIRAINALLTCGEGQRVGIM 165

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDE 226
           AGSG+GKSTLL M AR    D  +I+L+GERGRE+REFIE D   + LKKSVVVVATSD+
Sbjct: 166 AGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQ 225

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            P++R      A TIAEYF ++G  VLL++DS TRFA ++RE+    GE P  +GY  SV
Sbjct: 226 PPLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSV 285

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LP+LLER G      G+IT + +VLV+GD+ N+PI+D++RSILDGHIVLNR LA   
Sbjct: 286 FAALPKLLERTG--SFLDGSITGLYTVLVEGDDFNEPISDAMRSILDGHIVLNRELAARA 343

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YPP+D LAS SR+ +      +++  S    L+  + +  D+  IG Y+PG +  +D A
Sbjct: 344 IYPPLDILASASRVMNDVTERSQQQFASRFKELLAAYRQAEDLINIGAYKPGSNPTIDYA 403

Query: 407 VHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
           + ++  + +F++Q   D +S E    E+ 
Sbjct: 404 IAKMDGMVNFIRQGIHDGVSMEQSIAELA 432


>gi|237653565|ref|YP_002889879.1| ATPase, FliI/YscN family [Thauera sp. MZ1T]
 gi|237624812|gb|ACR01502.1| ATPase, FliI/YscN family [Thauera sp. MZ1T]
          Length = 464

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 5/339 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   + +  +  +    + R  + +    G+R I+    + 
Sbjct: 125 ALLGRVVDGAGRPLDGQGPLHTQE-TRSLQGRAINPLARAPIAQPLDVGVRAINALLTVG 183

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS L+ M AR    + +++ L+GERGREV+EFI+  LG + L +SV
Sbjct: 184 RGQRLGLFAGSGVGKSVLIGMMARYTEAEVIVVGLIGERGREVKEFIDHSLGPEGLARSV 243

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP++R      A T+AEYF  +G  VLLI+DS+TR+A + REIA   GE PV
Sbjct: 244 VVAAPADTSPLMRMQGAAYATTVAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPV 303

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP SVF+ LP L+ER G   +  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL
Sbjct: 304 TRGYPPSVFARLPALVERAGNGPEGGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVL 363

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+LA++G YP +D   S+SR        D   +V        R++ +RD+  +G Y+PG
Sbjct: 364 SRNLADQGHYPAIDIEQSISRAMHNLVGDDHFNVVRQFKQFFSRYQRSRDLIAVGAYQPG 423

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            D +LD AV   P +  FL+Q    +   + ++   +KL
Sbjct: 424 GDPLLDMAVKLYPRLEAFLQQG---IQEHETYEGALQKL 459


>gi|325920571|ref|ZP_08182493.1| ATPase FliI/YscN family [Xanthomonas gardneri ATCC 19865]
 gi|325548964|gb|EGD19896.1| ATPase FliI/YscN family [Xanthomonas gardneri ATCC 19865]
          Length = 460

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 144/323 (44%), Positives = 206/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   + G+G +SM  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 121 GRVIDSDGTPLDGKGPIRGEGSVSMAGVSINP--LAREPITTSLDVGVRAINALLPIGRG 178

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 179 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 238

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 239 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 298

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 299 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 358

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD  W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 359 RVADSGLYPAIDVESSVSRVVQDIADDTW----RLRIRKLKRLLSAYSSNRDLIAIGAYQ 414

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 415 RGSDPATDEALARWPDIVEFLGQ 437


>gi|300311372|ref|YP_003775464.1| flagellum-specific ATP synthase [Herbaspirillum seropedicae SmR1]
 gi|300074157|gb|ADJ63556.1| flagellum-specific ATP synthase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 468

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 142/318 (44%), Positives = 198/318 (62%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P+D    L   + S  +  +    + R  +     TGIR I+    +  GQ
Sbjct: 132 GRVLDGAGRPLDNLGPL-HTERSAPLAVRAANPLGRAPIRDILDTGIRAINSMLTVGRGQ 190

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV 
Sbjct: 191 RMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIEQILGAEGLARSVVVA 250

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D  P++R        +IAEYF  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 251 APADTPPLMRLQGAAYCTSIAEYFRDQGKDVLLIMDSLTRYAMAQREIALAIGEPPATKG 310

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G  ++  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVLNR 
Sbjct: 311 YPPSVFAKLPALVERAGNGDEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRQ 370

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D   S+SR       A+ ++    L  L  RF+  RD+  +G Y  G D 
Sbjct: 371 LAEAGHYPAIDIEQSISRAMHSITDAEHQRSSRHLKQLYSRFQRNRDLISVGAYAAGSDP 430

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           ILD+A+  +P +  FL+Q
Sbjct: 431 ILDEAIALLPRMEAFLQQ 448


>gi|317129206|ref|YP_004095488.1| ATPase, FliI/YscN family [Bacillus cellulosilyticus DSM 2522]
 gi|315474154|gb|ADU30757.1| ATPase, FliI/YscN family [Bacillus cellulosilyticus DSM 2522]
          Length = 437

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 146/352 (41%), Positives = 221/352 (62%), Gaps = 5/352 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P     EI+ G LV    +  +I       G+V++ LG+P+D  + L  G  +   
Sbjct: 67  VLLMPFDATTEIAPGSLVEATNKPLQIKIGTSLVGQVVDGLGRPLDHTE-LKNGLTNFPT 125

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  + R R+ +    GIR ID    +  GQRIG+FAGSG+GKSTL++M A++   D
Sbjct: 126 DNTPPNPLKRPRITEALSLGIRAIDGLFTVGKGQRIGIFAGSGVGKSTLMAMIAKNSEAD 185

Query: 189 KVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVR+F+E D   D LK ++VVVATSD+  ++R    +TA  IAE+F +
Sbjct: 186 INVIALIGERGREVRDFVERDLNEDGLKNTIVVVATSDQPALMRIKGAMTATAIAEFFRN 245

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G NV L++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +E   G I
Sbjct: 246 QGLNVNLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFATLPKLLERSGTNEY--GTI 303

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLVDGD+ N+PIAD+VR ILDGH+VL+R LA +G++P ++ L S+SRL +   + 
Sbjct: 304 TAFYTVLVDGDDLNEPIADTVRGILDGHLVLDRKLANKGQFPAINVLTSISRLMNDLVTP 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           + K     + + + ++ ++ D+  IG Y+ G +  LD+A+   P + +++KQ
Sbjct: 364 EHKLAADKVRNYLSQYYDSEDLISIGAYKRGTNKDLDEAIKLYPQVINYIKQ 415


>gi|134281964|ref|ZP_01768670.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
 gi|134246493|gb|EBA46581.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
          Length = 442

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 168/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHIVL+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIVLSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|146307844|ref|YP_001188309.1| flagellum-specific ATP synthase [Pseudomonas mendocina ymp]
 gi|145576045|gb|ABP85577.1| flagellar protein export ATPase FliI [Pseudomonas mendocina ymp]
          Length = 448

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 146/355 (41%), Positives = 215/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +Y+ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   +   D   
Sbjct: 77  IYLMPVGSLAGIAPGARVVPLPDAGRLPMGMS--MLGRVLDGAGRALDGKGGMKAEDWVP 134

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                + P +NR  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 135 VDGPAINP-LNRDPISQPLDVGIRTINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFI++ LG + LK+SVVV + +D++P++R  A      IAEYF
Sbjct: 194 AEIIVVGLIGERGREVKEFIDEILGAEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER G  E   G
Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPRLVERAGNGEAGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG YP +D  +S+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIESSISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++ K       L  R++++RD+  +G Y PG D   D A+ + P +  +L+Q 
Sbjct: 374 PPEQLKQAQRFKQLWSRYQQSRDLISVGAYVPGGDADTDLAIARQPQMAQYLRQG 428


>gi|83647778|ref|YP_436213.1| type III secretion system ATPase [Hahella chejuensis KCTC 2396]
 gi|83635821|gb|ABC31788.1| putative Yops secretion ATP synthase YscN [Hahella chejuensis KCTC
           2396]
          Length = 439

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 152/365 (41%), Positives = 220/365 (60%), Gaps = 5/365 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+        + P+G    IS    V   G+   I+      GRV++ +G P+DG +
Sbjct: 59  LAEVVGFQEKEALLTPMGDMLGISTATEVITTGQSHHIAVGPHLLGRVLDGMGAPMDGKN 118

Query: 118 SLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           +    DL    + +  P  M R+ + +    G+R +D       GQR+GVFA +G GKST
Sbjct: 119 ADFPSDLQHYPVYADAPSPMMRRMISEPLSLGVRALDGLLTCGEGQRMGVFAAAGGGKST 178

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LLSM       D ++I+L+GERGREVREFIE  LG + L +SV+V++TSD   + R  A 
Sbjct: 179 LLSMLVMGADVDVIVIALIGERGREVREFIEHNLGPEGLARSVLVISTSDRPSMERAKAA 238

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A TIAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ LP+LLE
Sbjct: 239 YVATTIAEYFRDQGQKVLLLMDSVTRFARAQREIGLAAGEPPTRRGFPPSVFATLPKLLE 298

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R+G    +KG+ITA+ +VLV+GD+ ++PIAD VRSILDGHIVL+R LA    YP +D LA
Sbjct: 299 RVG--FNDKGSITALYTVLVEGDDMSEPIADEVRSILDGHIVLSRKLAATNHYPAIDVLA 356

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S SR+     S + ++    +  L+ ++ +   +  IG Y+ G D + D+A+ ++  I  
Sbjct: 357 STSRVMTAITSPEHRQAAGKMRELMAKYVDVELLVKIGEYQRGSDPVADEAIAKIDRIRG 416

Query: 416 FLKQS 420
           FLKQ+
Sbjct: 417 FLKQA 421


>gi|238787473|ref|ZP_04631271.1| secretion system apparatus ATP synthase ssaN [Yersinia
           frederiksenii ATCC 33641]
 gi|238724260|gb|EEQ15902.1| secretion system apparatus ATP synthase ssaN [Yersinia
           frederiksenii ATCC 33641]
          Length = 406

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 157/382 (41%), Positives = 220/382 (57%), Gaps = 18/382 (4%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGK 111
           ++D L +V+ I      + P      +  G  V    H  R R+ P     GRV++ LG 
Sbjct: 14  SADMLAEVVAIEQQTALLSPFASSAGLRCGQWVSPLGHAHRIRVGPD--LVGRVLDGLGV 71

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           PID    L       E+ S  P  + RQ V++   TGIR ID       GQRIG+FA +G
Sbjct: 72  PIDDGPPLS--GYWRELDSSPPDPLTRQPVQQILTTGIRAIDGLLSCGEGQRIGIFAAAG 129

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230
           +GKS+LLSM       D  +++L+GERGREVREF+E  L    + ++VVVVATSD   + 
Sbjct: 130 VGKSSLLSMLCAGCRADITVLALIGERGREVREFLEQVLTPQARARTVVVVATSDRPALE 189

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R     TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE+P    +P SVF+ L
Sbjct: 190 RLKGIYTATTVAEYFRERGLKVLLMADSLTRYARAAREIGLAAGEIPAMGSFPASVFAAL 249

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           PRLLER G SE   G+ITA  ++L++GD+ N+P+AD  RS+LDGHIVL+R LA  G YP 
Sbjct: 250 PRLLERAGNSES--GSITAFYTILLEGDDMNEPVADEARSLLDGHIVLSRQLAGSGHYPA 307

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  ASVSR+  +  S + + L   L  +   ++E   +  +G Y+ G DL  D+A+ + 
Sbjct: 308 IDIAASVSRIMPQIVSTEHRALAQKLRQMQACYQEIELLVRVGEYQEGQDLHADEALQRY 367

Query: 411 PIIYDFLKQ--------SPSDL 424
           P I  FL+Q        +P+DL
Sbjct: 368 PAICAFLQQEYALSSGKTPADL 389


>gi|78067885|ref|YP_370654.1| ATPase FliI/YscN [Burkholderia sp. 383]
 gi|77968630|gb|ABB10010.1| ATPase FliI/YscN [Burkholderia sp. 383]
          Length = 519

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 149/323 (46%), Positives = 205/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  + R+ +      G+R I+    +  G
Sbjct: 179 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LEREPIHHVLDVGVRAINALLTVGRG 236

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 237 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 296

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 297 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 356

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R
Sbjct: 357 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 416

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396
           +LAE G YP +D  AS+SR    A +A  DE  L  V     ++ R++  RD+  +G Y 
Sbjct: 417 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 472

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
           PG D  LD+A+   P I  FL+Q
Sbjct: 473 PGRDAQLDRAIALYPRIEAFLQQ 495


>gi|126443725|ref|YP_001063282.1| type III secretion system ATPase [Burkholderia pseudomallei 668]
 gi|126223216|gb|ABN86721.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 668]
          Length = 442

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 167/432 (38%), Positives = 245/432 (56%), Gaps = 10/432 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EQGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQIATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSEDV 429
            Q   + S  D 
Sbjct: 421 NQRTDEYSPPDA 432


>gi|167043567|gb|ABZ08262.1| putative ATP synthase alpha/beta family, nucleotide-binding domain
           protein [uncultured marine microorganism
           HF4000_APKG2K17]
          Length = 462

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 150/320 (46%), Positives = 208/320 (65%), Gaps = 7/320 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRVI+ L +P+DG   LG+   S E+    +V   MNRQR++K    G+R I+       
Sbjct: 113 GRVIDPLMRPMDG---LGELSTSTEVPLYPEVVNPMNRQRIKKPLDVGVRSINACLTCGR 169

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQRIG+ AGSG+GKS LL M AR    D  +ISLVGERG+EVREFIED LG+  +++SVV
Sbjct: 170 GQRIGIMAGSGVGKSVLLGMMARYTDADINVISLVGERGKEVREFIEDNLGEEGMRRSVV 229

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +VATSD+ P+LR      A +IAE+F ++G +VLL +DS+TRFA + REI   +GE P  
Sbjct: 230 IVATSDQPPLLRMRGAYIATSIAEHFRNEGQDVLLSMDSLTRFAMAQREIGLAAGEPPTT 289

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF+ LP LLER G +    G+IT   +VLV+GD+ NDPIAD++R+I+DGHI L+
Sbjct: 290 KGYPPSVFALLPGLLERTG-THDGPGSITGFYTVLVEGDDANDPIADAIRAIVDGHIYLS 348

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R +AE+G YP VD L+S SR+          KL   +   +  + E  D+  IG Y  G 
Sbjct: 349 REIAEKGTYPAVDLLSSTSRVMVDVVGEKHLKLNQIMRRTLATYREAEDLINIGAYVQGS 408

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +  +D A+ + P+I +F++Q
Sbjct: 409 NPEIDYAITKKPLIQEFIQQ 428


>gi|167835053|ref|ZP_02461936.1| flagellar protein export ATPase FliI [Burkholderia thailandensis
           MSMB43]
          Length = 523

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 183 GRIVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 240

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 241 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 300

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 301 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 360

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 361 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 420

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR           + V     ++ R++  RD+  +G Y PG D
Sbjct: 421 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 480

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 481 AQLDRAIALYPRIESFLQQ 499


>gi|238764048|ref|ZP_04625003.1| secretion system apparatus ATP synthase ssaN [Yersinia kristensenii
           ATCC 33638]
 gi|238697719|gb|EEP90481.1| secretion system apparatus ATP synthase ssaN [Yersinia kristensenii
           ATCC 33638]
          Length = 434

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 161/379 (42%), Positives = 219/379 (57%), Gaps = 8/379 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACW 101
           V LG+    Q  + + L +V+ I      + P      +  G  V   G   RI      
Sbjct: 36  VALGELC--QIASPNRLAEVVAIEQQTALLSPFSSSFGLRCGQWVSPLGHAHRIRVGDDL 93

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ LG P+D    L       E+    P  + RQ V++   TGIR ID       G
Sbjct: 94  AGRVLDGLGVPMDAGPPLT--GYWCELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVV 220
           QR+G+FA +G+GKS+LLSM       D  +++L+GERGREVREF+E  L    + ++VVV
Sbjct: 152 QRMGIFAAAGVGKSSLLSMLCAGCAADITVLALIGERGREVREFLEQVLTPQTRARTVVV 211

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           VATSD   + R     TA T+AEYF  +G  VLL+ DS+TR A + REI   +GE PV  
Sbjct: 212 VATSDRPALERLKGLYTATTVAEYFRERGLKVLLMADSLTRHARAAREIGLAAGEPPVMG 271

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
            +PTSVF+ LPRLLER G SE+  G+ITA  +VLV+GD+ N+PIAD VRS+LDGHIVL+R
Sbjct: 272 SFPTSVFATLPRLLERAGNSER--GSITAFYTVLVEGDDMNEPIADEVRSLLDGHIVLSR 329

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LA  G YP +D  ASVSR+  +  S + + L   L HL   ++E   +  +G Y+ G D
Sbjct: 330 QLAGAGHYPAIDIAASVSRIMPQIVSVEHRALAQKLRHLQACYQEIELLVRVGEYQQGQD 389

Query: 401 LILDKAVHQVPIIYDFLKQ 419
           L  D+A+ + P I  FL+Q
Sbjct: 390 LQADEALQRYPAICAFLQQ 408


>gi|225181608|ref|ZP_03735049.1| flagellar protein export ATPase FliI [Dethiobacter alkaliphilus AHT
           1]
 gi|225167716|gb|EEG76526.1| flagellar protein export ATPase FliI [Dethiobacter alkaliphilus AHT
           1]
          Length = 439

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 154/371 (41%), Positives = 220/371 (59%), Gaps = 8/371 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    I  G  V   GR F +       G V++ LG P+DG    G G +   +
Sbjct: 69  VLMMPLGDLRGIGPGCEVLPTGREFTVKAGPHLLGHVLDGLGVPLDGARINGAGKVC-SV 127

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  + RQR+++   TGIR ID+F     GQRIG+F+GSG+GKST+L M A+    D
Sbjct: 128 DNDPPNPLERQRIKEVLPTGIRAIDMFLTCGQGQRIGIFSGSGVGKSTMLGMIAKHSEAD 187

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREV +FIE  LG+  L +SVVV  TSD  P+LR    L A  IAEYF  
Sbjct: 188 INVIALIGERGREVVDFIERDLGEEGLARSVVVAVTSDRPPLLRIKGALVATAIAEYFRD 247

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  V+L++DS+TR A + RE+    GE P  +GY  SVF+ LPR+LER G S    G+I
Sbjct: 248 QGKKVMLMMDSVTRLAMAQREVGLAIGEPPTTKGYTPSVFALLPRVLERAGTSRS--GSI 305

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLVDGD+ N+P+AD+VR ILDGHIVL R LA +  +P +D   S+SRL  +  S 
Sbjct: 306 TGLYTVLVDGDDFNEPVADAVRGILDGHIVLTRDLAAKNHFPAIDVGKSISRLMTELASE 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + +KL       +  + E  D+  IG Y  G +  +D+A   +  ++ FL+Q   D++  
Sbjct: 366 EHRKLAGQFRDYLSAYAEAEDLINIGAYVDGTNPRVDRARQYITAMHTFLRQ---DVNEC 422

Query: 428 DVFQEITKKLQ 438
           D +++   KL+
Sbjct: 423 DPYEQALDKLK 433


>gi|330866447|gb|EGH01156.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 452

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 149/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHI+L+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHILLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q   D  S
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434


>gi|167561143|ref|ZP_02354059.1| flagellar protein export ATPase FliI [Burkholderia oklahomensis
           EO147]
 gi|167568362|ref|ZP_02361236.1| flagellar protein export ATPase FliI [Burkholderia oklahomensis
           C6786]
          Length = 521

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 198/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  + R+ +      G+R I+    +  G
Sbjct: 181 GRVVDASGRPLDNLGPLASKVDAPLAAPSINP--LEREPIHHVLDVGVRAINTLLTVGRG 238

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 239 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 298

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 299 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 358

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 359 GYPPSVFAKLPALVERTGNGPQGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 418

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 419 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 478

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 479 AQLDRAIALYPRIESFLQQ 497


>gi|260853456|ref|YP_003227347.1| putative lateral flagellum-specific ATP synthase [Escherichia coli
           O26:H11 str. 11368]
 gi|257752105|dbj|BAI23607.1| predicted lateral flagellum-specific ATP synthase [Escherichia coli
           O26:H11 str. 11368]
 gi|323158036|gb|EFZ44136.1| flagellum-specific ATP synthase [Escherichia coli EPECa14]
          Length = 445

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I       GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESCLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMREPASLELVQ 430


>gi|186477681|ref|YP_001859151.1| FliI/YscN family ATPase [Burkholderia phymatum STM815]
 gi|184194140|gb|ACC72105.1| ATPase, FliI/YscN family [Burkholderia phymatum STM815]
          Length = 547

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 143/322 (44%), Positives = 201/322 (62%), Gaps = 4/322 (1%)

Query: 101 W--CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           W   GRV++A GKP+DG   L   + +      + P ++R+ + K    G+R I+    +
Sbjct: 207 WELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTINP-LHREPIHKVLDVGVRAINSLLTV 265

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
             GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L +S
Sbjct: 266 GRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARS 325

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P
Sbjct: 326 VVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPP 385

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIV
Sbjct: 386 ATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIV 445

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R+LAE G YP +D  AS+SR      S            ++ R++  RD+  +G Y  
Sbjct: 446 LSRALAEAGHYPAIDIEASISRAMTALISDAHLDRTRQFKQMLSRYQRNRDLINVGAYSA 505

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
           G D +LDKA+   P +  FL+Q
Sbjct: 506 GRDAVLDKAIALYPRMEAFLQQ 527


>gi|53722650|ref|YP_111635.1| type III secretion system ATPase [Burkholderia pseudomallei K96243]
 gi|76817792|ref|YP_335845.1| type III secretion system ATPase [Burkholderia pseudomallei 1710b]
 gi|167820518|ref|ZP_02452198.1| type III secretion system ATPase [Burkholderia pseudomallei 91]
 gi|167830034|ref|ZP_02461505.1| type III secretion system ATPase [Burkholderia pseudomallei 9]
 gi|226200025|ref|ZP_03795574.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
 gi|254186954|ref|ZP_04893470.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254263795|ref|ZP_04954660.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
 gi|52213064|emb|CAH39102.1| putative type III secretion protein [Burkholderia pseudomallei
           K96243]
 gi|76582265|gb|ABA51739.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710b]
 gi|157934638|gb|EDO90308.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|225927877|gb|EEH23915.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
 gi|254214797|gb|EET04182.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
          Length = 442

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 167/432 (38%), Positives = 244/432 (56%), Gaps = 10/432 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSEDV 429
            Q   + S  D 
Sbjct: 421 NQRTDEYSPPDA 432


>gi|114566387|ref|YP_753541.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337322|gb|ABI68170.1| type III secretion system ATPase, FliI/YscN [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 442

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 156/394 (39%), Positives = 230/394 (58%), Gaps = 8/394 (2%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNL---GQVIRINLDIVYICPVGIGEEISLGDLV 87
           ++  T+      V +G+    Q   SD      +V+      + + P+G  E I  G  +
Sbjct: 31  AIGLTIEATGPRVRMGELCFLQTNYSDRQLVPAEVVGFKDKKILLMPLGNLEGIGPGSEL 90

Query: 88  FHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G   R+       GRV+N LG+PID D    K + +  + ++ P  + R+R+ +  +
Sbjct: 91  LASGTTLRVQVGMELVGRVLNGLGEPID-DRGRIKSETTYPVTNQPPSPLKRKRITEVLQ 149

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
            G++ ID    +  GQR+G+ AGSG+GKSTL+ M AR+   D  +I+L+GERGREVREF+
Sbjct: 150 VGVKAIDGLVSIGKGQRMGILAGSGVGKSTLIGMIARNTEADINVIALIGERGREVREFL 209

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E  LG+  L KSVVVVATSD+  ++R      A +IAEYF  +G +VL ++DS+TRFA +
Sbjct: 210 ERDLGEEGLGKSVVVVATSDQPALVRLKGAFVATSIAEYFRDQGKDVLFLMDSVTRFALA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            RE+    GE P  RGY  SVF+ LP+LLER G S  EKG IT + SVLV+GD+ N+PI 
Sbjct: 270 QREVGLAIGEPPATRGYTPSVFAMLPKLLERAGTS--EKGTITGLYSVLVEGDDLNEPIT 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+VR ILDGHI L+RSLA    YP +D   S+SR+     S    K  +    ++  +EE
Sbjct: 328 DAVRGILDGHIALSRSLAAMNLYPAIDVGQSISRVMIDIASPKHIKNANRFRSILATYEE 387

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            RD+  IG Y+ G +  +D+++  +    +F++Q
Sbjct: 388 ARDLIDIGAYKKGSNPRIDESIALIDKCQNFIRQ 421


>gi|171316792|ref|ZP_02906003.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171098050|gb|EDT42866.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 386

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 148/361 (40%), Positives = 217/361 (60%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +VI     +  + P    + +S    V   GR   +       GRV+++LG PIDG   +
Sbjct: 6   EVIGFTRHVALLSPFARVDRVSRTTRVVALGRPLSVPVGRMLLGRVVDSLGWPIDGGAPV 65

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             GDL   + ++ P  M R  +     TG+R +D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 66  QAGDLR-SVFAEPPAPMRRCPIAVPLATGVRAVDAMLTLAEGQRMGIFAPAGVGKSTLLG 124

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +I+L+GERGREVREF+E  LG + + +SVVV ATSD S I R  A   A
Sbjct: 125 MLARGAHCDVNVIALIGERGREVREFVETILGREGMARSVVVCATSDRSAIERAKAAYVA 184

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE F  +G  VLL++DS+TRFA ++RE+   +GE PV RG+P SVF+ELPRLLER G
Sbjct: 185 TAIAESFRDEGQRVLLMMDSLTRFARALREVGLAAGESPVRRGFPPSVFAELPRLLERAG 244

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VL + D   DP+++ VR I+DGH+VL+R++A + +YP +D L S+S
Sbjct: 245 MG--ERGSITALYTVLEEDDAGGDPVSEEVRGIVDGHMVLSRAIAAKNQYPAIDVLGSLS 302

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +    D  +    +  L+ ++ E   +  IG Y+ G + I D+A+ ++ +I  FL 
Sbjct: 303 RVMSQVVPPDHVEAAGRVRRLLAQYGEIEALLQIGEYQGGTNAIADEAIAKIDVIRAFLS 362

Query: 419 Q 419
           Q
Sbjct: 363 Q 363


>gi|254301364|ref|ZP_04968808.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
 gi|157811412|gb|EDO88582.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
          Length = 442

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERTKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|167915639|ref|ZP_02502730.1| type III secretion system ATPase [Burkholderia pseudomallei 112]
          Length = 442

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 168/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHIVL+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIVLSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|157959910|ref|YP_001499944.1| FliI/YscN family ATPase [Shewanella pealeana ATCC 700345]
 gi|157844910|gb|ABV85409.1| ATPase, FliI/YscN family [Shewanella pealeana ATCC 700345]
          Length = 445

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 149/349 (42%), Positives = 212/349 (60%), Gaps = 4/349 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           GR  I       GRV++ LG+P+DG   + K    + +  K    + R+ +E+    GIR
Sbjct: 91  GRCLIPSGLGILGRVLDGLGQPLDGLGCI-KHLPHVPLQHKPTNPLMRKAIEEPLDVGIR 149

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFI++ L
Sbjct: 150 AINALLPIGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVKEFIDESL 209

Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+   K++VV+ A +D +P++R  A      IA  +  +G  VLL++DS+TR+A + REI
Sbjct: 210 GEEGRKRAVVIAAPADTTPLMRMRAMRLCHHIAATYRDQGKQVLLLVDSLTRYAQAQREI 269

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A + GE P  +GYP S F++LP L+E  G  +   G +TA  +VL +GD+  DPIADS R
Sbjct: 270 ALSLGEPPATKGYPPSAFAQLPSLVEMAGNGQHPTGTLTAFYTVLTEGDDQQDPIADSAR 329

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGHIVL+R LAE+G +P +D  ASVSRLA K  S +  K      HL  R+ E +D+
Sbjct: 330 AILDGHIVLSRKLAEKGHFPAIDIGASVSRLATKVASEETLKQGQWFRHLNSRYNEVKDL 389

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             +GGY+ G D  +D AV   P + +FL+QS +  S  D    IT   Q
Sbjct: 390 LPLGGYQAGHDPEMDMAVSAYPKMAEFLRQSTN--SQADHAHSITALAQ 436


>gi|328468945|gb|EGF39905.1| type III secretion system ATPase [Vibrio parahaemolyticus 10329]
          Length = 440

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 151/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG D + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERSKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    + +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPNHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PSDL
Sbjct: 371 ASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRTFLRQGTHEPSDL 427


>gi|330444058|ref|YP_004377044.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila pecorum
           E58]
 gi|328807168|gb|AEB41341.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila pecorum
           E58]
          Length = 442

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 233/383 (60%), Gaps = 10/383 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD--D 117
           +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQNFAFLSPLGELTGVSPASEVVPTGLPLHIRAGDGLLGRVLNGLGEPIDTEFKG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D +  I    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS+L
Sbjct: 121 PLVNVDETYPIFCPPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSL 180

Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR  A 
Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF ++G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLLE
Sbjct: 241 YVGTAIAEYFRNQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LA
Sbjct: 301 RSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +  
Sbjct: 359 SISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FLKQ   D+  +  ++E  ++L+
Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438


>gi|297584038|ref|YP_003699818.1| flagellar protein export ATPase FliI [Bacillus selenitireducens
           MLS10]
 gi|297142495|gb|ADH99252.1| flagellar protein export ATPase FliI [Bacillus selenitireducens
           MLS10]
          Length = 434

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 153/382 (40%), Positives = 235/382 (61%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKP-IDGD 116
           L +V+    + V + P     +I+ G LV   GR   +       G V++ LG+  +DG 
Sbjct: 55  LAEVVGFREEKVLLMPFDRISDIAAGSLVETMGRPLEVKVGRDMIGTVVDGLGRHFLDGG 114

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           + +G    S +  ++ P  M R R+ +    G++ ID    +  GQR+G+FAGSG+GKST
Sbjct: 115 ERIGNQYYSTD--NEPPNPMTRPRISEPLGLGVKAIDGLFTVGKGQRMGIFAGSGVGKST 172

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           L++M  +S   D  +I+L+GERGREVR+FIE  LG+  +K ++VVVATSD+ P++R    
Sbjct: 173 LMAMITKSSEADINVIALIGERGREVRDFIERDLGEEGMKNTIVVVATSDQPPLMRIKGA 232

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           +TA  I+EYF   G +V L++DS+TR A + REI    GE P  +GY  SVF+ LPRLLE
Sbjct: 233 MTATAISEYFRDLGYDVNLMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFALLPRLLE 292

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S+   G+ITA  +VLVDGD+ N+P+ADSVR ILDGH+VL+R LA +G +P ++PL+
Sbjct: 293 RSGMSQS--GSITAFYTVLVDGDDMNEPVADSVRGILDGHLVLDRKLANKGHFPAINPLS 350

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+ ++      ++    +  +I  ++E+ D+  IG Y+ G +  +D+A+ + P + +
Sbjct: 351 SISRIMNELVDDRHRQAADKVRQIISTYQESEDLINIGAYKKGSNPEVDEAIKRFPEVNE 410

Query: 416 FLKQSPSDLSSEDVFQEITKKL 437
           FL Q   +  S D   EI  +L
Sbjct: 411 FLVQEVHEAFSYD---EIMNQL 429


>gi|153001449|ref|YP_001367130.1| flagellum-specific ATP synthase [Shewanella baltica OS185]
 gi|151366067|gb|ABS09067.1| flagellar protein export ATPase FliI [Shewanella baltica OS185]
          Length = 445

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 148/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +V+  + +++Y+ P+     +  G  V   G +  ++      GRV++  G P+DG  
Sbjct: 61  IAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L     +    + + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 ALQTDQQAPRHSAAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LGD  + +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS
Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P +  F
Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419

Query: 417 LKQSPSD 423
           L+Q+  D
Sbjct: 420 LRQTMRD 426


>gi|126175125|ref|YP_001051274.1| flagellum-specific ATP synthase [Shewanella baltica OS155]
 gi|160876174|ref|YP_001555490.1| flagellum-specific ATP synthase [Shewanella baltica OS195]
 gi|217972619|ref|YP_002357370.1| flagellum-specific ATP synthase [Shewanella baltica OS223]
 gi|304409957|ref|ZP_07391576.1| flagellar protein export ATPase FliI [Shewanella baltica OS183]
 gi|307302330|ref|ZP_07582088.1| flagellar protein export ATPase FliI [Shewanella baltica BA175]
 gi|125998330|gb|ABN62405.1| flagellar protein export ATPase FliI [Shewanella baltica OS155]
 gi|160861696|gb|ABX50230.1| flagellar protein export ATPase FliI [Shewanella baltica OS195]
 gi|217497754|gb|ACK45947.1| ATPase FliI/YscN [Shewanella baltica OS223]
 gi|304351366|gb|EFM15765.1| flagellar protein export ATPase FliI [Shewanella baltica OS183]
 gi|306914368|gb|EFN44789.1| flagellar protein export ATPase FliI [Shewanella baltica BA175]
 gi|315268370|gb|ADT95223.1| flagellar protein export ATPase FliI [Shewanella baltica OS678]
          Length = 445

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 148/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +V+  + +++Y+ P+     +  G  V   G +  ++      GRV++  G P+DG  
Sbjct: 61  IAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L     +    + + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 ALQTDQQAPRHSAAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LGD  + +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS
Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P +  F
Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419

Query: 417 LKQSPSD 423
           L+Q+  D
Sbjct: 420 LRQTMRD 426


>gi|89094452|ref|ZP_01167392.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92]
 gi|89081344|gb|EAR60576.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92]
          Length = 463

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 147/364 (40%), Positives = 218/364 (59%), Gaps = 9/364 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           +V+  + D +Y+ P+   E +  G  V       + P      GRV+N +GKPIDG   L
Sbjct: 61  EVVGFSGDRIYLMPLYPIEGLQAGTPVIARADTGMVPVGMNLLGRVLNGVGKPIDGKGPL 120

Query: 120 ---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
               +  L+ EI++     + R  + +    GIR I+    +  GQR+G+FAGSG+GKS 
Sbjct: 121 RPEAETGLAGEIINP----LLRAPINQTLDVGIRTINSLLTVGRGQRMGLFAGSGVGKSV 176

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           LL M  R    + +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D+SP++R  A 
Sbjct: 177 LLGMMTRFTEAEIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDSPLMRLRAS 236

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             +  IAEYF  +G NVLL++DS+TR+A + REIA   GE P  +GYP SVF+++P+L+E
Sbjct: 237 QLSTRIAEYFRDQGKNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKIPKLVE 296

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G +++  G ITA  +VL +GD+  DP+ADS R+ILDGH+VL R LAE+G YP +D  A
Sbjct: 297 RAGNAQEGGGAITAFYTVLTEGDDQQDPVADSARAILDGHVVLARRLAEQGHYPAIDVEA 356

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR   +    D  K+      L  ++ +  D+  +G Y  G D   D  +  +P +  
Sbjct: 357 SISRAMPQIIEPDHLKMAMRFKQLYSKYRQNEDLINVGAYVKGSDPDTDFVIENLPSMNA 416

Query: 416 FLKQ 419
           FL+Q
Sbjct: 417 FLRQ 420


>gi|262284529|gb|ACY41066.1| VscN [Vibrio alginolyticus]
          Length = 440

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G  ++ LG+P DG  S  +      +   
Sbjct: 88  VSPMGKMHEVGVGDHLL--------------GTTLDGLGRPFDGTQSQ-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAEVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + KSV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++   +D +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVESDHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PSDL
Sbjct: 371 ASAAHIREMLAKYEEVELLIKIGEYQHGADSRADMAIAQSDDIRAFLRQGTHEPSDL 427


>gi|187775646|ref|ZP_02797343.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188024746|ref|ZP_02773677.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189404737|ref|ZP_02810590.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC869]
 gi|189405700|ref|ZP_02823671.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC508]
 gi|193070354|ref|ZP_03051296.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E110019]
 gi|187771370|gb|EDU35214.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188016937|gb|EDU55059.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189374706|gb|EDU93122.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC869]
 gi|189378721|gb|EDU97137.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC508]
 gi|192956293|gb|EDV86754.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E110019]
          Length = 438

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P++
Sbjct: 56  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 115

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 116 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 175

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 176 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 235

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 236 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 295

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 296 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 353

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  ++    +  IG Y  G D   DKA+    +I 
Sbjct: 354 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 413

Query: 415 DFLKQSPSDLSS 426
           +F++QS  D+SS
Sbjct: 414 NFIQQSTKDISS 425


>gi|330414746|gb|AEC13712.1| non-flagellar type III secretion system ATPase [Acidovorax
           citrulli]
          Length = 442

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 207/323 (64%), Gaps = 4/323 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI++LG+PIDG   L   + +  + +  P  M R+ +E    TG++ ID    L  GQ
Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G+GKSTL+ M AR    D  +I+L+GERGREVREF+E  LG+  + +SVVV 
Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD S   R  A   A  +AEY+  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+E+PRLLER G   +  G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R 
Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   +YP +D L S+SR+  +    + ++       L+ ++EE   +  +G YRPG D 
Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYRPGNDP 404

Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424
           + D+A+ +   I DFL QS SDL
Sbjct: 405 LADEAMEKHAAIRDFLNQSTSDL 427


>gi|187918162|ref|YP_001883725.1| flagellum-specific ATP synthase [Borrelia hermsii DAH]
 gi|119861010|gb|AAX16805.1| flagellum-specific ATP synthase [Borrelia hermsii DAH]
          Length = 436

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 148/341 (43%), Positives = 221/341 (64%), Gaps = 5/341 (1%)

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I +GD V+   +  +I+ S    GRVI++LG+PID               S + P + R 
Sbjct: 79  IEVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGQFLGNHYKELSFSSINP-LKRG 137

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
              K   TG+RV+D F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERG
Sbjct: 138 IFSKQIVTGVRVLDGFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERG 197

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE+ EFIE  LG+   KKSV++V+TSDESPI R     TA  IAE+F  +G +V+L+ DS
Sbjct: 198 RELNEFIEYDLGEECFKKSVLIVSTSDESPISRYKGAYTATLIAEHFRDRGMDVMLLFDS 257

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA++ REI+ + GELP  +GYP SVF E+P LLER+G +   KG+IT   +VLV+ D
Sbjct: 258 ITRFANAKREISLSMGELPATKGYPPSVFVEIPILLERLGLN--GKGSITGFYTVLVESD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +PIAD+++++LDGHI+L+R L++ G YP V+ L+S SR   +  + +++KL+S + +
Sbjct: 316 DFTEPIADNMKAVLDGHIILDRDLSDRGIYPSVNILSSTSRSLHRIVNFEKQKLISKIRN 375

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L+  ++   D+   G Y  G +  +D A+ + P I DFL Q
Sbjct: 376 LLSIYKNYEDLIKTGIYMKGSNKEVDLAIAKYPKIIDFLSQ 416


>gi|254251154|ref|ZP_04944472.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
 gi|124893763|gb|EAY67643.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
          Length = 515

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+DG   L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 175 GRVVDASGRPLDGLGPLASKVDAPLSSPSINP--LDREPIHHVLDVGVRAINALLTVGRG 232

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 233 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 292

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 293 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 352

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 353 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 412

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 413 ALAEAGHYPAIDIEASISRAMTALIDDAHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRD 472

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 473 AQLDRAIALYPRIEAFLQQ 491


>gi|167717597|ref|ZP_02400833.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           DM98]
          Length = 454

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 114 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 171

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 172 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 231

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 232 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 291

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R
Sbjct: 292 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 351

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 352 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 411

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 412 AQLDRAIALYPRIESFLQQ 430


>gi|167743337|ref|ZP_02416111.1| type III secretion system ATPase [Burkholderia pseudomallei 14]
          Length = 434

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|145298349|ref|YP_001141190.1| flagellum-specific ATP synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851121|gb|ABO89442.1| Polar flagellum-specific ATP synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 443

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+ +G+P+DG   +           ++ P ++R+ + +    G+R I+    +  
Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFIED LG+  + +SVV
Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEDILGEEGRARSVV 219

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR+A + REIA   GE P  
Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+
Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA+ G YP +D   S+SR+     S +   L  +L      +++ RD+  IG Y  G 
Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYSLYQQNRDLITIGAYSQGS 399

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D  +D+A+   P +  FL+Q
Sbjct: 400 DPRIDRAIVHKPYLDQFLQQ 419


>gi|221361483|emb|CAX18653.1| Type III secretion system, ATPase, LEE associated [Escherichia
           coli]
 gi|221361543|emb|CAX18733.1| Type III secretion system, ATPase, LEE associated [Escherichia
           coli]
          Length = 446

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P++
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 TNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  ++    +  IG Y  G D   DKA+    +I 
Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421

Query: 415 DFLKQSPSDLSS 426
           +F++QS  D+SS
Sbjct: 422 NFIQQSTKDISS 433


>gi|15804229|ref|NP_290268.1| hypothetical protein Z5119 [Escherichia coli O157:H7 EDL933]
 gi|15833822|ref|NP_312595.1| EscN [Escherichia coli O157:H7 str. Sakai]
 gi|168753518|ref|ZP_02778525.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4401]
 gi|168759815|ref|ZP_02784822.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4501]
 gi|168766115|ref|ZP_02791122.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4486]
 gi|168779850|ref|ZP_02804857.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4076]
 gi|195936251|ref|ZP_03081633.1| EscN [Escherichia coli O157:H7 str. EC4024]
 gi|208807966|ref|ZP_03250303.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208813614|ref|ZP_03254943.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208819394|ref|ZP_03259714.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209396453|ref|YP_002273166.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326243|ref|ZP_03442327.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254795643|ref|YP_003080480.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225787|ref|ZP_05940068.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258832|ref|ZP_05951365.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291285056|ref|YP_003501874.1| escN [Escherichia coli O55:H7 str. CB9615]
 gi|12518459|gb|AAG58832.1|AE005596_2 escN [Escherichia coli O157:H7 str. EDL933]
 gi|3414902|gb|AAC31513.1| L0034 [Escherichia coli]
 gi|13364043|dbj|BAB37991.1| type III secretion system protein EscN [Escherichia coli O157:H7
           str. Sakai]
 gi|54311615|emb|CAG17530.1| EscN protein [Escherichia coli]
 gi|189002580|gb|EDU71566.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4076]
 gi|189359190|gb|EDU77609.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4401]
 gi|189364526|gb|EDU82945.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4486]
 gi|189369772|gb|EDU88188.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4501]
 gi|195957519|gb|ACG59630.1| type III secretion system protein EscN [Escherichia coli O157:H7]
 gi|195957578|gb|ACG59688.1| type III secretion system protein EscN [Escherichia coli]
 gi|195957635|gb|ACG59744.1| EscN [Escherichia coli]
 gi|208727767|gb|EDZ77368.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208734891|gb|EDZ83578.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208739517|gb|EDZ87199.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209157853|gb|ACI35286.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217322464|gb|EEC30888.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254595043|gb|ACT74404.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. TW14359]
 gi|255348316|gb|ACU09458.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli]
 gi|290764929|gb|ADD58890.1| escN [Escherichia coli O55:H7 str. CB9615]
 gi|320191258|gb|EFW65908.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. EC1212]
 gi|320639359|gb|EFX08974.1| escN hypothetical protein [Escherichia coli O157:H7 str. G5101]
 gi|320644803|gb|EFX13839.1| escN [Escherichia coli O157:H- str. 493-89]
 gi|320650067|gb|EFX18563.1| escN [Escherichia coli O157:H- str. H 2687]
 gi|320655414|gb|EFX23349.1| escN [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661041|gb|EFX28477.1| escN [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666166|gb|EFX33172.1| escN [Escherichia coli O157:H7 str. LSU-61]
 gi|326337309|gb|EGD61144.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. 1044]
 gi|326341682|gb|EGD65471.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. 1125]
          Length = 446

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P++
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  ++    +  IG Y  G D   DKA+    +I 
Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421

Query: 415 DFLKQSPSDLSS 426
           +F++QS  D+SS
Sbjct: 422 NFIQQSTKDISS 433


>gi|254185075|ref|ZP_04891664.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
 gi|254194394|ref|ZP_04900826.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|169651145|gb|EDS83838.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|184215667|gb|EDU12648.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
          Length = 442

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|295678028|ref|YP_003606552.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1002]
 gi|295437871|gb|ADG17041.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1002]
          Length = 546

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 202/321 (62%), Gaps = 8/321 (2%)

Query: 103 GRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           GRV++A G+P+DG   LG      LS  +++     +NR+ + K    G+R I+    + 
Sbjct: 205 GRVLDASGRPLDGLGPLGTQTDAPLSAPVINP----LNREPIHKVLDVGVRAINSLLTVG 260

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L +SV
Sbjct: 261 RGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSV 320

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P 
Sbjct: 321 VIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPA 380

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 381 TKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 440

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE G YP +D  AS+SR        +          ++ R++  RD+  +G Y  G
Sbjct: 441 SRSLAEAGHYPAIDIEASISRAMTALIDDNHLNKTRMFKQMLSRYQRNRDLINVGAYSAG 500

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LD+A+   P +  FL+Q
Sbjct: 501 RDALLDRAIALYPRMEAFLQQ 521


>gi|212637772|ref|YP_002314297.1| ATPase FliI/YscN [Shewanella piezotolerans WP3]
 gi|212559256|gb|ACJ31710.1| ATPase FliI/YscN [Shewanella piezotolerans WP3]
          Length = 447

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 206/330 (62%), Gaps = 2/330 (0%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           GR++I       GRV+N LG+P+D D    K    + +  K    + R+ +++    GIR
Sbjct: 87  GRYQIPSGQGLLGRVLNGLGQPLD-DLGCIKHMPHVPLQFKTTNPLLRKPIKEPLDVGIR 145

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREVREFI++ L
Sbjct: 146 AINALLPVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIDESL 205

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+   K++VVV A +D +P++R  A      IA  +  +G  VLL++DS+TR+A + REI
Sbjct: 206 GEEGRKRAVVVAAPADTTPLMRMRAMRLCHQIAAAYRDQGKQVLLLVDSLTRYAQAQREI 265

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A + GE P  +GYP S F++LP L+E  G S+   G +TA  +VL +GD+  DPIADS R
Sbjct: 266 ALSLGEPPATKGYPPSAFAQLPSLVEMAGNSQHPTGTLTAFYTVLTEGDDQQDPIADSAR 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGHIVL+R LAE+G +P +D  ASVSRLA +  + +  +      H+  R+ E RD+
Sbjct: 326 AILDGHIVLSRKLAEQGHFPAIDIAASVSRLATQVANEETLRQGQWFRHINSRYNEIRDL 385

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             +GGY+ G D  +D +V   P +  FLKQ
Sbjct: 386 LPLGGYQAGHDPEMDLSVSAYPHMATFLKQ 415


>gi|120609166|ref|YP_968844.1| type III secretion system ATPase [Acidovorax citrulli AAC00-1]
 gi|58700621|gb|AAW81012.1| HrcN [Acidovorax citrulli]
 gi|120587630|gb|ABM31070.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Acidovorax citrulli AAC00-1]
          Length = 442

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 207/323 (64%), Gaps = 4/323 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI++LG+PIDG   L   + +  + +  P  M R+ +E    TG++ ID    L  GQ
Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G+GKSTL+ M AR    D  +I+L+GERGREVREF+E  LG+  + +SVVV 
Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD S   R  A   A  +AEY+  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+E+PRLLER G   +  G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R 
Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   +YP +D L S+SR+  +    + ++       L+ ++EE   +  +G YRPG D 
Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYRPGNDP 404

Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424
           + D+A+ +   I DFL QS SDL
Sbjct: 405 LADEAMEKHAAIRDFLNQSTSDL 427


>gi|167813739|ref|ZP_02445419.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 91]
          Length = 464

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 124 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 181

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 182 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 241

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 242 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 301

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R
Sbjct: 302 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 361

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 362 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 421

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 422 AQLDRAIALYPRIESFLQQ 440


>gi|1196321|gb|AAB51413.1| flagellar export apparatus [Borrelia burgdorferi]
          Length = 436

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 146/341 (42%), Positives = 218/341 (63%), Gaps = 4/341 (1%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I +G+ V+   +   I+ S    GRVI++LG+PID   S         I  K+ P +NR 
Sbjct: 78  IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRS 136

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
             E    TG++V+D F P+  GQR+G+F+GSG+GKSTLL M A++   D  +I+ +GERG
Sbjct: 137 IFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERG 196

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE+ EFIE  LG+  LKKSV+VV+TSDESPI R      A  IAEYF  +G +V    DS
Sbjct: 197 RELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVAFCFDS 256

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G +    G++T   +VLV+GD
Sbjct: 257 ITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +P+AD+++++LDGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    +
Sbjct: 316 DFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARN 375

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L+  +++  D+   G Y  G +  +D A+ + P I +F+ Q
Sbjct: 376 LLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416


>gi|238796934|ref|ZP_04640438.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
 gi|238719194|gb|EEQ11006.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
          Length = 456

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 16/387 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGK 111
           +V+  N +I+Y+ P+   + I  G  V+         H  +  + P     GRV++A  +
Sbjct: 66  EVVGFNGEILYLMPLENVDGILPGARVYAQGSGADIAHGKQLPLGPE--LLGRVLDASAR 123

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG    G    +      V P + R  ++     G+R I+    +  GQR+G+FAGSG
Sbjct: 124 PLDGLPPPGCAKQAPLFTQPVNPLL-RDPIKDVLDVGVRAINGLLTVGRGQRMGLFAGSG 182

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230
           +GKS LL M AR    D +++ L+GERGREV++FIE+ LG+  L +SVV+ A +D SPIL
Sbjct: 183 VGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGEEGLSRSVVIAAPADVSPIL 242

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R    + A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++L
Sbjct: 243 RMQGAVYATRIAEDFRERGMDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 302

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G   KE G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP 
Sbjct: 303 PALVERAGNGVKEGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPA 362

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR   +       + V +   L+  ++  RD+  +G Y  G D +LDKA+   
Sbjct: 363 IDIEASISRAMTELIDQAHYRKVQNFKQLLSSYQRNRDLVSVGAYAAGSDPLLDKAIRLY 422

Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437
           P +  +L+Q+  + S    ++E + +L
Sbjct: 423 PEMETYLQQAIHESSG---YEEASDRL 446


>gi|104782818|ref|YP_609316.1| flagellum-specific ATP synthase [Pseudomonas entomophila L48]
 gi|95111805|emb|CAK16529.1| flagellum-specific ATP synthase [Pseudomonas entomophila L48]
          Length = 451

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 153/367 (41%), Positives = 220/367 (59%), Gaps = 13/367 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117
           +V+  + D V++ PVG    ++ G  V      GR  +  S    GRV++  G+ +DG  
Sbjct: 68  EVMGFSGDKVFLMPVGSIAGLAPGARVVPLDDSGRLPMGMS--MLGRVLDGAGRALDGKG 125

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +  + +   V   +NR  + +    GIR I+    +  GQR+G+FAG+G+GKS L
Sbjct: 126 GM-KAEDWVPMDGPVINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVL 184

Query: 178 LSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKM 233
           L M     CF +   +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  
Sbjct: 185 LGMMT---CFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLR 241

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L
Sbjct: 242 AAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKL 301

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G  E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D 
Sbjct: 302 VERAGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDI 361

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR+  +    D  +       L  R  ++RD+  +G Y  G D+  D A+   P +
Sbjct: 362 EASISRVMPQVVDPDHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDVETDLAIALQPKL 421

Query: 414 YDFLKQS 420
            DFL+Q 
Sbjct: 422 VDFLRQG 428


>gi|76808788|ref|YP_331828.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710b]
 gi|167892349|ref|ZP_02479751.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           7894]
 gi|167909062|ref|ZP_02496153.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           112]
 gi|254260525|ref|ZP_04951579.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710a]
 gi|76578241|gb|ABA47716.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710b]
 gi|254219214|gb|EET08598.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710a]
          Length = 526

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 186 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 243

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 244 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 303

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 304 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 363

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R
Sbjct: 364 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 423

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 424 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 483

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 484 AQLDRAIALYPRIESFLQQ 502


>gi|53717869|ref|YP_106855.1| flagellum-specific ATP synthase [Burkholderia pseudomallei K96243]
 gi|53724862|ref|YP_104750.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           23344]
 gi|67641492|ref|ZP_00440269.1| flagellar protein export ATPase FliI [Burkholderia mallei GB8 horse
           4]
 gi|121599361|ref|YP_994237.1| flagellum-specific ATP synthase FliI [Burkholderia mallei SAVP1]
 gi|124385098|ref|YP_001028109.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10229]
 gi|126438671|ref|YP_001057272.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           668]
 gi|126449561|ref|YP_001082919.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10247]
 gi|126453967|ref|YP_001064514.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106a]
 gi|134283677|ref|ZP_01770376.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
 gi|167004334|ref|ZP_02270094.1| flagellum-specific ATP synthase FliI [Burkholderia mallei PRL-20]
 gi|167736641|ref|ZP_02409415.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 14]
 gi|167822254|ref|ZP_02453725.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 9]
 gi|167843849|ref|ZP_02469357.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           B7210]
 gi|167900844|ref|ZP_02488049.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917102|ref|ZP_02504193.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           BCC215]
 gi|217425054|ref|ZP_03456550.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           576]
 gi|226199777|ref|ZP_03795328.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810409|ref|YP_002894860.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           MSHR346]
 gi|242314340|ref|ZP_04813356.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106b]
 gi|254175108|ref|ZP_04881769.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           10399]
 gi|254182186|ref|ZP_04888783.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1655]
 gi|254188116|ref|ZP_04894628.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196347|ref|ZP_04902771.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           S13]
 gi|254201852|ref|ZP_04908216.1| flagellum-specific ATP synthase FliI [Burkholderia mallei FMH]
 gi|254207181|ref|ZP_04913532.1| flagellum-specific ATP synthase FliI [Burkholderia mallei JHU]
 gi|254295771|ref|ZP_04963228.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           406e]
 gi|52208283|emb|CAH34215.1| flagellum-specific ATP synthase [Burkholderia pseudomallei K96243]
 gi|52428285|gb|AAU48878.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           23344]
 gi|121228171|gb|ABM50689.1| flagellum-specific ATP synthase FliI [Burkholderia mallei SAVP1]
 gi|124293118|gb|ABN02387.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10229]
 gi|126218164|gb|ABN81670.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           668]
 gi|126227609|gb|ABN91149.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106a]
 gi|126242431|gb|ABO05524.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10247]
 gi|134245086|gb|EBA45181.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
 gi|147747746|gb|EDK54822.1| flagellum-specific ATP synthase FliI [Burkholderia mallei FMH]
 gi|147752723|gb|EDK59789.1| flagellum-specific ATP synthase FliI [Burkholderia mallei JHU]
 gi|157806304|gb|EDO83474.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           406e]
 gi|157935796|gb|EDO91466.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160696153|gb|EDP86123.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           10399]
 gi|169653090|gb|EDS85783.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           S13]
 gi|184212724|gb|EDU09767.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1655]
 gi|217392074|gb|EEC32100.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           576]
 gi|225928128|gb|EEH24164.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pakistan 9]
 gi|237505470|gb|ACQ97788.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           MSHR346]
 gi|238522435|gb|EEP85879.1| flagellar protein export ATPase FliI [Burkholderia mallei GB8 horse
           4]
 gi|242137579|gb|EES23981.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106b]
 gi|243060334|gb|EES42520.1| flagellum-specific ATP synthase FliI [Burkholderia mallei PRL-20]
          Length = 523

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 183 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 240

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 241 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 300

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 301 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 360

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R
Sbjct: 361 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 420

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 421 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 480

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 481 AQLDRAIALYPRIESFLQQ 499


>gi|325981188|ref|YP_004293590.1| flagellar protein export ATPase FliI [Nitrosomonas sp. AL212]
 gi|325530707|gb|ADZ25428.1| flagellar protein export ATPase FliI [Nitrosomonas sp. AL212]
          Length = 466

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 207/340 (60%), Gaps = 7/340 (2%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV+N +G+P+D    LG    + S+ + S+    + R  V +    G+R I+    +  
Sbjct: 127 GRVLNGVGEPLD---RLGPTHAEHSVPLYSRPFNPLERTPVSEPLDVGVRAINTLLTVGR 183

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE+ LG + L +SVV
Sbjct: 184 GQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIENILGKEGLARSVV 243

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP+LR      A  IAEYF   G +VLLI+DS+TR+A + REI+   GE P  
Sbjct: 244 VAAPADTSPLLRLQGAAYATAIAEYFRDSGKHVLLIMDSLTRYAMAQREISLAIGEPPAT 303

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP+L+ER G   +  G+ITA  +VL +GD+ NDPI DS R+ILDGHIVL+
Sbjct: 304 KGYPPSVFAKLPQLVERAGNGNQAGGSITAFYTVLAEGDDQNDPIVDSARAILDGHIVLS 363

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D  AS+SR+        +  +      L  R++ + D+  +G Y  G 
Sbjct: 364 RRLAEAGHYPAIDIEASISRVMTSVVPPKQIDMARQFKSLYARYQRSHDLISVGAYVAGT 423

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           D  LD+A+   P    FL Q+ S   +  D   ++TK  +
Sbjct: 424 DPELDRAIRLYPSFEKFLHQTMSQYENFADSLVKLTKLFE 463


>gi|327481266|gb|AEA84576.1| flagellum-specific ATP synthase [Pseudomonas stutzeri DSM 4166]
          Length = 452

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 147/354 (41%), Positives = 219/354 (61%), Gaps = 7/354 (1%)

Query: 70  VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +Y+ PVG    I+ G  V    + GR  +  S    GRV++  G+ +DG   +   D  +
Sbjct: 77  LYLMPVGSLAGIAPGARVVPLVNTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDW-V 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 134 PMDGPVINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFIE+ LG+ ++K+SVVV + +D++P++R  A      IAEYF
Sbjct: 194 ADIIVVGLIGERGREVKEFIENILGEESIKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G +E+  G
Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLVERAGNAEQGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIAD+ R +LDGHIVL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           SA+  +       L  R++++RD+  +G Y PG D   D A+ +   +  +L+Q
Sbjct: 374 SAEHVRASQRFKQLWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMVSYLRQ 427


>gi|167724372|ref|ZP_02407608.1| type III secretion system ATPase [Burkholderia pseudomallei DM98]
 gi|167898947|ref|ZP_02486348.1| type III secretion system ATPase [Burkholderia pseudomallei 7894]
          Length = 442

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGQRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|38674625|gb|AAR26330.1| AscN [Aeromonas hydrophila]
          Length = 440

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/408 (39%), Positives = 232/408 (56%), Gaps = 20/408 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV G  I  +  +      LS    +  F  HQ   +  LG++  I+ +   + P G   
Sbjct: 39  VVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTP-LGEMFGISSN-TEVSPTGAMH 96

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ +G+ +               G+V++ LG P  G   L +      +    PP M+R+
Sbjct: 97  QVGVGEHLL--------------GQVLDGLGNPFAGGH-LPEPAAWYPVYRDAPPPMSRK 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +    GIR ID       GQR+G+FA +G GKSTLL+   RS   D  +++L+GERG
Sbjct: 142 RIAQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 201

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFIE  LG+  LKK+V+VVATSD   + R  A   A +IAEYF  +G  VLL++DS
Sbjct: 202 REVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S  +KG+ITA+ +VLV+GD
Sbjct: 262 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    + +     L  
Sbjct: 320 DMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRLRS 379

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            + ++EE   +  IG Y+ G D + D+A+ ++  I  +LKQ   + SS
Sbjct: 380 WLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLKQGTHEPSS 427


>gi|160875386|ref|YP_001554702.1| type III secretion system ATPase [Shewanella baltica OS195]
 gi|160860908|gb|ABX49442.1| ATPase, FliI/YscN family [Shewanella baltica OS195]
 gi|315267586|gb|ADT94439.1| ATPase, FliI/YscN family [Shewanella baltica OS678]
          Length = 443

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 162/368 (44%), Positives = 222/368 (60%), Gaps = 8/368 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+ +  D   + P  +   +  G+LV   G     P      GRV++ LG P+DG    
Sbjct: 65  EVVAVKGDEALLSPFDVTAGLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDG---Y 121

Query: 120 GKGDLSMEI-MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           G    S+       P  ++RQ ++     GIR ID       GQRIG+FA +G GKSTLL
Sbjct: 122 GLTATSLRPNQGSAPNPLSRQLIDTVMPMGIRAIDSALACGIGQRIGIFAAAGGGKSTLL 181

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
            M A     D ++++LVGERGREVREFIE  L    + ++V+VVATSD  P+ R  A LT
Sbjct: 182 GMIAAHCQADVIVLTLVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLT 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G NVLL++DS+TRFA S REIA  +GE PV+ GYP SVF  L  L+ER 
Sbjct: 242 ATTIAEYFRDQGKNVLLMVDSLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERA 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+   KG+IT + +VLV+GD+ N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASV
Sbjct: 302 GPA--AKGSITGIYTVLVEGDDMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASV 359

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+ D+  S +++   + +  L+  ++E + +  +G Y  G D   D+AV +   I  FL
Sbjct: 360 SRVMDQIVSPEQRCNAAKMRQLLALYQEVQLLIRVGEYVQGEDQETDEAVARHQDIQQFL 419

Query: 418 KQSPSDLS 425
            QS ++ S
Sbjct: 420 CQSVNEFS 427


>gi|197122672|ref|YP_002134623.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
 gi|196172521|gb|ACG73494.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
          Length = 435

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/382 (41%), Positives = 218/382 (57%), Gaps = 12/382 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117
           +V+ +  D   + P G    + L   V   GR    R  P     GRV++ LG+P+DG  
Sbjct: 58  EVVGLRDDRAVLVPFGDLGGVGLDAEVVPTGRPHTIRAGPG--LLGRVLDGLGRPLDGA- 114

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L  G     +    P  + R+ V      G+RV+D       GQRIG+FAGSG+GKSTL
Sbjct: 115 PLPAGLEEWAVDRPAPNPLTRRAVAAPLPLGVRVLDGLLTAGEGQRIGLFAGSGVGKSTL 174

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    D  ++ LVGERGREVREF+E  LG + L +SVVV ATSD   ++R  A  
Sbjct: 175 LGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAH 234

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AE+F+ +GD VLL++DS+TR+A ++RE+   +GE P  +GYP SVF+ LPRLLER
Sbjct: 235 VATAVAEWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLER 294

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   + +G ITAV +VLV G +  +PIAD VR ILDGH+VL+R++A  GR+P VDPL S
Sbjct: 295 AG--NRARGGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVAAGGRFPAVDPLQS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     +         +  L+      RD+  +G YR G D   D A+ ++P I  F
Sbjct: 353 LSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEADLALARLPAIEAF 412

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L+Q    L      +E   +L+
Sbjct: 413 LRQP---LGEAAPLEETLGRLE 431


>gi|33596839|ref|NP_884482.1| type III secretion system ATPase [Bordetella parapertussis 12822]
 gi|33573540|emb|CAE37531.1| putative ATP synthase in type III secretion system [Bordetella
           parapertussis]
          Length = 444

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/410 (38%), Positives = 236/410 (57%), Gaps = 16/410 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
            L ++G  +  + ++   V  + +   VCL   + + G++ +  G+V+    D   + P+
Sbjct: 20  TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130
           G    IS    V   GR  + P      GRV++ LG+P+D  +S   G L       + +
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAES---GPLHAHKFYPVFA 133

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +++L+GERGREVREF+E  LG +  +KSV+V ATSD+S + R  A   A  IAEYF  +G
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL ++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G ++   G+ITA
Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   
Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           K L   +  L+ ++++   +  IG ++ G D   D+A+ ++  I  FL+Q
Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEHKQGADASTDEAIQKIGQINAFLRQ 421


>gi|17549091|ref|NP_522431.1| type III secretion system ATPase [Ralstonia solanacearum GMI1000]
 gi|17431342|emb|CAD18021.1| hrp conserved protein hrcn [Ralstonia solanacearum GMI1000]
 gi|219566960|dbj|BAH04991.1| type III secretion system ATPase [Ralstonia solanacearum]
          Length = 439

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/327 (44%), Positives = 201/327 (61%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P DG   L   +  + + +  P  M R+ VE    TG+RVID    L  GQ
Sbjct: 104 GRVLDGLGRPADGGPPLDVVEY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FA +G+GKSTL+ MFAR    D  +I L+GERGREVREFIE  LG + +++SVVV 
Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD S + R  A      +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 223 ATSDRSAVERAKAAYVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+ELPRLLER G S    G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R 
Sbjct: 283 FPPSVFAELPRLLERAGMS--AAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   RYP +D L S+SR+  +    D       +  L+ ++ E   +  +G Y+ G D 
Sbjct: 341 IAARNRYPAIDILNSLSRVMTQVMPRDHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           + D AV     +  FL+Q   +  S D
Sbjct: 401 VADAAVQWNDWMESFLRQRTDEWCSPD 427


>gi|187925743|ref|YP_001897385.1| flagellar protein export ATPase FliI [Burkholderia phytofirmans
           PsJN]
 gi|187716937|gb|ACD18161.1| flagellar protein export ATPase FliI [Burkholderia phytofirmans
           PsJN]
          Length = 549

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%)

Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           W   GRV++A G+P+DG   LG      LS  +++     +NR+ + K    G+R I+  
Sbjct: 206 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 261

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214
             +  GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG+  L
Sbjct: 262 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 321

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            +SVV+ A +D SP+LR  A   + ++AEYF  +G +VLL++DS+TR+A + REIA   G
Sbjct: 322 ARSVVIAAPADVSPLLRMQAASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 381

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 382 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 441

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+RSLAE G YP +D  AS+SR        +          ++ R++  RD+  +G 
Sbjct: 442 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGA 501

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D +LD+A+   P +  FL+Q
Sbjct: 502 YSSGRDALLDRAIALYPRMEAFLQQ 526


>gi|296536940|ref|ZP_06898966.1| possible H(+)-transporting two-sector ATPase [Roseomonas cervicalis
           ATCC 49957]
 gi|296262733|gb|EFH09332.1| possible H(+)-transporting two-sector ATPase [Roseomonas cervicalis
           ATCC 49957]
          Length = 312

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 136/305 (44%), Positives = 199/305 (65%), Gaps = 4/305 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R+      G+R +D F  +  GQR+G+FA SG+GKSTLLSM AR    D  ++ LVGE
Sbjct: 1   RARLGPRLDLGVRALDAFCTMRRGQRLGLFAASGVGKSTLLSMLARGAECDVAVLCLVGE 60

Query: 198 RGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE+REFIED LG+  L +SVV+ ATSD  P++R+ A   A+T+AE  ++ G +VLL++
Sbjct: 61  RGRELREFIEDDLGEAGLARSVVICATSDTPPLMRREAAYAAMTVAESLANDGRHVLLMM 120

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS-EKEKGNITAVISVLV 315
           DS+TRFA + REI   +GE P  RGY   VF+ELPRLLER GP  E + G IT + +VLV
Sbjct: 121 DSVTRFALACREIGLAAGEPPATRGYTPGVFAELPRLLERAGPCLEGQGGAITGLFTVLV 180

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+H++PIAD+VR ILDGH+VL+R + E GR+P +D L S+SR        +E++++  
Sbjct: 181 EGDDHDEPIADAVRGILDGHVVLDRKIGERGRWPAIDILRSLSRTVPGCLEPEEREVMQR 240

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD--LSSEDVFQEI 433
              L+    +  ++  +G YR G D  +D+A+   P I  FL+Q   +  +++ + F  +
Sbjct: 241 ARRLLSLQADMAELVRLGAYRAGTDPAVDEALRLAPRIEAFLRQRKDEPLMTTAESFAAL 300

Query: 434 TKKLQ 438
            + +Q
Sbjct: 301 AEAMQ 305


>gi|88813204|ref|ZP_01128444.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrococcus mobilis Nb-231]
 gi|88789526|gb|EAR20653.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrococcus mobilis Nb-231]
          Length = 457

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/369 (39%), Positives = 222/369 (60%), Gaps = 19/369 (5%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC---------GRVINALGK 111
           +V+    D +Y+ P G     SL  L  +    R+ P A  C         GRV++  G+
Sbjct: 67  EVVGFAGDKLYLMPTG-----SLHGLTPNA---RVIPHAEACEARVGTGLLGRVLDGAGR 118

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG   L + D +M ++ +    + R  +++    GIR I+    +  GQR+G+FAGSG
Sbjct: 119 PLDGK-KLPRADATMPLVGRSINPLLRAPIQRPLDVGIRTINALLTVGRGQRMGLFAGSG 177

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           +GKS LL M  R    D V++ L+GERGREV+EFI+  LGD  L ++VV+ A +D SP++
Sbjct: 178 VGKSVLLGMMTRYTTADIVVVGLIGERGREVKEFIDHILGDEGLSRAVVIAAPADTSPLM 237

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R    L   +IAEYF  +G  VLL++DS+TR+A + REI    GE P  +GYP SVF++L
Sbjct: 238 RLHGALLTSSIAEYFRDRGCQVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFAKL 297

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P+L+ER G    + G+ITA  +VL +GD+HNDP+AD+ R+ILDGH+VL+R LA+ G YP 
Sbjct: 298 PQLVERAGNGPVDGGSITAFYTVLTEGDDHNDPVADAARAILDGHVVLSRELADAGHYPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS SR      +A++ K V    +L   + + +D+  +G Y+ G +  +D+A+   
Sbjct: 358 IDIEASASRAMLNIITAEQLKAVHRFKNLYSLYRQNQDLINVGAYKAGSNARVDEAMAYQ 417

Query: 411 PIIYDFLKQ 419
           P +  +L+Q
Sbjct: 418 PELVRYLRQ 426


>gi|304414272|ref|ZP_07395640.1| type III secretion system ATPase [Candidatus Regiella insecticola
           LSR1]
 gi|304283486|gb|EFL91882.1| type III secretion system ATPase [Candidatus Regiella insecticola
           LSR1]
          Length = 446

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/364 (42%), Positives = 221/364 (60%), Gaps = 6/364 (1%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
            L +V+ I   +  + P    + +S G  V       R++  +   GR+++ LG+PID  
Sbjct: 66  TLVEVVAIEQQVALLSPFSSSDGLSSGQSVSPLKHAHRVAVGSRLKGRILDGLGQPIDEG 125

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L KG    E+ +  P  + R+ +EK F TGIR ID       GQRIG+FA +G+GKST
Sbjct: 126 SAL-KGHWR-ELDNSPPDPLTRKPIEKPFITGIRSIDAMLCCGEGQRIGIFAAAGVGKST 183

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           LLSM   +   D ++++L+GERGREVREF+E  L    + +++VVVATSD   + R    
Sbjct: 184 LLSMLCENSDADVMVLALIGERGREVREFLEQVLTPEARARTIVVVATSDRPALERLKGV 243

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T  TIAEYF  +G  VLL++DS+TR+A + REI   +GE P A  +P SVF+ +PRLLE
Sbjct: 244 YTGTTIAEYFRERGLKVLLMVDSLTRYARAAREIGLAAGEAPAAGSFPPSVFAAMPRLLE 303

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S +  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  A
Sbjct: 304 RTGNSAR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAIDIAA 361

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  +  SA    L   L  +  R++E   +  +G Y+ G D   D+A+ + P +  
Sbjct: 362 SVSRIMPQVVSAKHMALAQKLRLIQARYQEIELLVRVGEYKTGQDPEADEALKRYPAVCA 421

Query: 416 FLKQ 419
           FL+Q
Sbjct: 422 FLQQ 425


>gi|15596301|ref|NP_249795.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PAO1]
 gi|107100555|ref|ZP_01364473.1| hypothetical protein PaerPA_01001580 [Pseudomonas aeruginosa PACS2]
 gi|116049033|ref|YP_792165.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892932|ref|YP_002441801.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa LESB58]
 gi|254239473|ref|ZP_04932795.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 2192]
 gi|296390530|ref|ZP_06880005.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PAb1]
 gi|313106066|ref|ZP_07792324.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 39016]
 gi|81541593|sp|Q9I4N1|FLII_PSEAE RecName: Full=Flagellum-specific ATP synthase
 gi|9947021|gb|AAG04493.1|AE004540_13 flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa PAO1]
 gi|115584254|gb|ABJ10269.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192851|gb|EAZ56914.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 2192]
 gi|218773160|emb|CAW28972.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa
           LESB58]
 gi|310878826|gb|EFQ37420.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 39016]
          Length = 451

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 147/354 (41%), Positives = 215/354 (60%), Gaps = 7/354 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           VY+ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   +   D   
Sbjct: 77  VYLMPVGSLAGIAPGARVVPLPDTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDWVP 134

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 135 MDGPTINP-LKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTR 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFI++ LG+  LK+SVVV + +D++P++R  A      IAEYF
Sbjct: 194 ADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G +E   G
Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            A+  +       L  R++++RD+  +G Y  G D   D A+ + P++  FL+Q
Sbjct: 374 EAEHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDPETDLAIARFPVMRQFLRQ 427


>gi|170722854|ref|YP_001750542.1| flagellum-specific ATP synthase [Pseudomonas putida W619]
 gi|169760857|gb|ACA74173.1| flagellar protein export ATPase FliI [Pseudomonas putida W619]
          Length = 452

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/355 (41%), Positives = 214/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +++ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   + K +  +
Sbjct: 77  IFLMPVGSIAGIAPGARVVPLDDSGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   +   +NR  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 134 PMDGPIINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER G  E   G
Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            A+  +       L  R  ++RD+  +G Y  G D   D A+   P + DFL+Q 
Sbjct: 374 DANHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQPKLVDFLRQG 428


>gi|222053605|ref|YP_002535967.1| ATPase FliI/YscN [Geobacter sp. FRC-32]
 gi|221562894|gb|ACM18866.1| ATPase FliI/YscN [Geobacter sp. FRC-32]
          Length = 443

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 151/365 (41%), Positives = 219/365 (60%), Gaps = 5/365 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +   + P+G    + LG L+     +  +       GRVI+ LG PID    +
Sbjct: 61  EVVGFRENKTLLMPLGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGAPIDDRGPI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+      + V P M R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL 
Sbjct: 121 ITGEEYPIYATPVNP-MKRRPIRQPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLG 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +I+L+GERGRE+REFIE D   + LKKSVVVVATSD+ P++R      A
Sbjct: 180 MIARYTEADVNVIALIGERGRELREFIEKDLQAEGLKKSVVVVATSDQPPLVRMRGAYIA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIAEYF ++G  VLL++DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G
Sbjct: 240 TTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               + G+IT + +VLV+GD+ N+PI+D++RSILDGHIVL+R LA    YPP+D L S S
Sbjct: 300 --NFQNGSITGLYTVLVEGDDFNEPISDAMRSILDGHIVLSRELAARNIYPPIDVLNSAS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     + + +KL  +   ++  + +  D+  IG Y+PG +  +D A+ ++  +  +LK
Sbjct: 358 RVMMDVTAKNHQKLAGNFKGVLATYRQAEDLINIGAYKPGSNPGIDYALAKIEHMNAYLK 417

Query: 419 QSPSD 423
           Q   D
Sbjct: 418 QDIKD 422


>gi|328947997|ref|YP_004365334.1| ATPase, FliI/YscN family [Treponema succinifaciens DSM 2489]
 gi|328448321|gb|AEB14037.1| ATPase, FliI/YscN family [Treponema succinifaciens DSM 2489]
          Length = 449

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 164/388 (42%), Positives = 228/388 (58%), Gaps = 14/388 (3%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPI 113
            S  L +V+ +    V +   G  + I +G  V   G     P      GRVI+A GKP 
Sbjct: 53  QSSVLAEVVGLEDSSVRLMAYGETKGIEVGCEVVASGHVLEVPVGLSLLGRVIDATGKPY 112

Query: 114 DGDDSLGKGDLSMEI----MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           DG     KG++  E     ++  P  M R+ ++K   TG+R ID    +  GQR+G+FAG
Sbjct: 113 DG-----KGEIFPEAYYPALASPPNPMERKPIDKRIVTGVRAIDGILTVGKGQRLGIFAG 167

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           SG+GKSTLLSM AR+   D  +I L+GERGREV +FI+  LG+  LK+SV+VVATSD+  
Sbjct: 168 SGVGKSTLLSMIARNTNADINVIGLIGERGREVMDFIKRDLGEEGLKRSVLVVATSDQPS 227

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           I R  A      IAEYF  +G +V+L+ DS+TRFAH+ REI   +GE P  RGYP SVF 
Sbjct: 228 ISRLRAAYVTTAIAEYFRDQGKDVMLMFDSVTRFAHAQREIGLATGEPPAQRGYPPSVFD 287

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LP+LLER G +  +KG+ITA  +VLVDGD+ ++PIAD VR  LDGHIVL RSLA    Y
Sbjct: 288 MLPKLLERTGTN--DKGSITAFYTVLVDGDDMDEPIADKVRGTLDGHIVLQRSLAARQHY 345

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D L S+SRL+ +      KK V  +   I  + E  ++   G Y+ G    +D+A+ 
Sbjct: 346 PAIDMLTSISRLSKRVSGTCTKKAVQRVRRWISVYSEQEEMINAGVYQKGSSPEIDEAID 405

Query: 409 QVPIIYDFLKQSPS-DLSSEDVFQEITK 435
               + +FL Q  +  ++ ED  + +++
Sbjct: 406 HHQAVEEFLCQEENCHITIEDTLKSLSE 433


>gi|254359685|ref|ZP_04975956.1| flagellum-specific ATP synthase FliI [Burkholderia mallei
           2002721280]
 gi|148028899|gb|EDK86831.1| flagellum-specific ATP synthase FliI [Burkholderia mallei
           2002721280]
          Length = 522

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  G
Sbjct: 182 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 239

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV
Sbjct: 240 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 299

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A T+AEYF  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 300 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 359

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R
Sbjct: 360 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 419

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           SLAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG D
Sbjct: 420 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 479

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD+A+   P I  FL+Q
Sbjct: 480 AQLDRAIALYPRIESFLQQ 498


>gi|215488979|ref|YP_002331410.1| translocator EscN [Escherichia coli O127:H6 str. E2348/69]
 gi|2865290|gb|AAC38383.1| EscN [Escherichia coli]
 gi|215267051|emb|CAS11496.1| translocator EscN [Escherichia coli O127:H6 str. E2348/69]
          Length = 446

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/372 (40%), Positives = 218/372 (58%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+I+ +G+P++
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLIDGIGRPME 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +           + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  ++    +  IG Y  G D   DKA+    +I 
Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421

Query: 415 DFLKQSPSDLSS 426
           +F++QS  D+SS
Sbjct: 422 NFIQQSTKDISS 433


>gi|67640496|ref|ZP_00439300.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei GB8 horse 4]
 gi|124382980|ref|YP_001025744.1| type III secretion system ATPase [Burkholderia mallei NCTC 10229]
 gi|126447182|ref|YP_001077828.1| type III secretion system ATPase [Burkholderia mallei NCTC 10247]
 gi|126457565|ref|YP_001076238.1| type III secretion system ATPase [Burkholderia pseudomallei 1106a]
 gi|166999374|ref|ZP_02265213.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei PRL-20]
 gi|167850350|ref|ZP_02475858.1| type III secretion system ATPase [Burkholderia pseudomallei B7210]
 gi|167907279|ref|ZP_02494484.1| type III secretion system ATPase [Burkholderia pseudomallei NCTC
           13177]
 gi|167923484|ref|ZP_02510575.1| type III secretion system ATPase [Burkholderia pseudomallei BCC215]
 gi|217422227|ref|ZP_03453730.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
 gi|237509290|ref|ZP_04522005.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|242313979|ref|ZP_04812996.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
 gi|254205055|ref|ZP_04911408.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei JHU]
 gi|126231333|gb|ABN94746.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106a]
 gi|126240036|gb|ABO03148.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           NCTC 10247]
 gi|147754641|gb|EDK61705.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei JHU]
 gi|217394458|gb|EEC34477.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
 gi|235001495|gb|EEP50919.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|238521216|gb|EEP84669.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei GB8 horse 4]
 gi|242137218|gb|EES23621.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
 gi|243064448|gb|EES46634.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei PRL-20]
 gi|261827070|gb|ABM99373.2| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           NCTC 10229]
          Length = 442

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%)

Query: 5   LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59
           L  L+++A+  +  L ++   G    +  V  T V  +     LG+    +G +   +  
Sbjct: 4   LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 64  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   
Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420

Query: 418 KQSPSDLSSED 428
            Q   + S  D
Sbjct: 421 NQRTDEYSPPD 431


>gi|239826616|ref|YP_002949240.1| flagellum-specific ATP synthase [Geobacillus sp. WCH70]
 gi|239806909|gb|ACS23974.1| ATPase, FliI/YscN family [Geobacillus sp. WCH70]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/368 (42%), Positives = 220/368 (59%), Gaps = 13/368 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P    + IS G +V   G+  +I       G+V++ LG P+DG   L KG   + I
Sbjct: 56  VLLMPFSTVQHISPGCIVEATGKPLQIHVGTPLIGQVLDPLGYPLDGS-PLPKGLHPISI 114

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  + R  + +  + G+R+ID    +  GQR+G+FAGSG+GKSTL+ M AR    D
Sbjct: 115 ERNPPNPLARPPINEPIEVGVRIIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNAD 174

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREFIE  LG + L +S+VVVATSD+  ++R     TA  IAEYF  
Sbjct: 175 INVIALIGERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRD 234

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +V+ ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G S    G I
Sbjct: 235 QGMDVMFMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTGTSAY--GTI 292

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLVDGD+ N+PIAD+VR ILDGH +L RSLA  G+YP ++ L SVSR+ +   + 
Sbjct: 293 TAFYTVLVDGDDMNEPIADTVRGILDGHFILERSLANRGQYPAINVLKSVSRVMNHIITP 352

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + ++    L  L+  +  + D+  IG Y+ G    +D+A+   P I  F KQ        
Sbjct: 353 EHRQAADKLRQLLSTYINSEDLINIGAYKRGSSNEIDEAIRYYPKIISFCKQ-------- 404

Query: 428 DVFQEITK 435
           D+ ++ITK
Sbjct: 405 DIHEKITK 412


>gi|167623382|ref|YP_001673676.1| flagellum-specific ATP synthase [Shewanella halifaxensis HAW-EB4]
 gi|167353404|gb|ABZ76017.1| flagellar protein export ATPase FliI [Shewanella halifaxensis
           HAW-EB4]
          Length = 446

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 207/322 (64%), Gaps = 2/322 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+PIDG  +L     +   ++ + P + R+ + +    G+R I+    +  GQ
Sbjct: 106 GRVLDGSGQPIDGLGNLRTDQKASRHVAAINP-LARRAISEPLDVGVRAINAMLTVGKGQ 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG +   +SVVV 
Sbjct: 165 RMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVA 224

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R  A  T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +G
Sbjct: 225 APADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKG 284

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP+L+ER G    ++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RS
Sbjct: 285 YPPSVFAKLPKLVERAGNGGGQQGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRS 344

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D  AS+SR+A    S +  + +  +  +   +++ +D+  IG Y  G D 
Sbjct: 345 LADSGHYPAIDIEASISRVAPMVISPEHLEAMRKVKQVYSLYQQNKDLISIGAYSQGSDP 404

Query: 402 ILDKAVHQVPIIYDFLKQSPSD 423
            +D A+   P +  FL+Q+  D
Sbjct: 405 RIDNAIRLQPAMNAFLRQTMKD 426


>gi|171321463|ref|ZP_02910409.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MEX-5]
 gi|171093261|gb|EDT38463.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MEX-5]
          Length = 442

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/371 (41%), Positives = 221/371 (59%), Gaps = 5/371 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 65  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGPL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 304 MG--EQGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 362 RIMPQIATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDAAADEAVAKIDRIRTFLN 421

Query: 419 QSPSDLSSEDV 429
           Q   + +  D 
Sbjct: 422 QRTDEYAPPDA 432


>gi|239817140|ref|YP_002946050.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
 gi|239803717|gb|ACS20784.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
          Length = 478

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G+P+DG   LG  D+S  +    PP   + R  ++     G+R I+    +  
Sbjct: 136 GRVVDAAGRPLDG---LGPLDVSRRVPLGAPPINPLARAPIDSVLDVGVRAINAMLTVGR 192

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    + +++ L+GERGREV++FIE+ LG+  L +SVV
Sbjct: 193 GQRMGLFAGSGVGKSVLLGMMARYTSAEVIVVGLIGERGREVKDFIENTLGEEGLARSVV 252

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP+LR      A  +AEYF  +G +VLLI+DS+TR+A + REIA   GE P  
Sbjct: 253 VAAPADNSPLLRLQGAAYATCLAEYFRDQGRDVLLIMDSLTRYAMAQREIALAVGEPPAT 312

Query: 280 RGYPTSVFSELPRLLERIGPSEKEK----GNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP SVF++LP L+ER G   ++     G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 313 KGYPPSVFAKLPALVERAGNGARDANGRGGSITAFYTVLSEGDDQQDPIADSARAILDGH 372

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R+LAE G YP +D  AS+SR         +   V      + R++  RD+  +G Y
Sbjct: 373 VVLSRTLAEAGHYPAIDIEASISRAMTALIEPSQFDTVRRFKQALSRYQRNRDLISVGAY 432

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
             G D  LD+A+   P I  FL+QS
Sbjct: 433 AAGHDPQLDQAIALYPRIEAFLQQS 457


>gi|167630292|ref|YP_001680791.1| flagellar protein export ATPase flii, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593032|gb|ABZ84780.1| flagellar protein export ATPase flii, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 433

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/405 (39%), Positives = 233/405 (57%), Gaps = 31/405 (7%)

Query: 48  FVVHQGKNSDNLGQVI---------RINLDIV-------YICPVGIGEEISLGDLVFHWG 91
            V+     S NLG+V          R+  ++V        + P+G    I  G  V   G
Sbjct: 26  LVIQSDGPSANLGEVCLVSTQSGKQRVRSEVVGFREGKTLLMPLGEMGGIGPGSQVLATG 85

Query: 92  R-FRISPSACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
               ++      GRV++ LG P+D G      GD  +   +  P  + R+R+++    G+
Sbjct: 86  DVLTVAVGEALLGRVLDGLGNPLDDGGPIATTGDYPL--TASPPNPLKRKRIQQPLPLGV 143

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           + ID       GQR+G+FAGSG+GKSTLL M AR+   D  +I L+GERGREVREFIE  
Sbjct: 144 KAIDGLLTCGRGQRLGIFAGSGVGKSTLLGMIARNTTADINVIGLIGERGREVREFIEKD 203

Query: 210 LG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG + L +SVVVVATSD+  ++R      A  IAE+F   G +V+L++DS+TRFA + RE
Sbjct: 204 LGPEGLARSVVVVATSDQPALVRLKGAFVATAIAEFFRDLGKDVMLMMDSVTRFAMAQRE 263

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +    GE P  RGY  SVF+ LP+LLER G S+K  G IT + +VLVDGD+ N+PIAD+V
Sbjct: 264 VGLAVGEPPATRGYTPSVFAMLPKLLERSGTSDK--GTITGLYTVLVDGDDMNEPIADAV 321

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R ILDGHIVL+R LA +  YP +D L+SVSR+  +  S + +   + L  ++  + E +D
Sbjct: 322 RGILDGHIVLSRDLAAQNHYPAIDILSSVSRVMIELVSKEHRDAAAQLRSVLATYREAKD 381

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           +  IG Y+ G +  +D ++ ++    +FL+Q        D+F+ I
Sbjct: 382 LIDIGAYQKGANPQIDYSLKKIDACREFLRQ--------DIFEAI 418


>gi|167573412|ref|ZP_02366286.1| type III secretion system ATPase [Burkholderia oklahomensis C6786]
          Length = 444

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/370 (42%), Positives = 221/370 (59%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 65  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGDGILGRVIDSFGEPIDGRGPL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 362 RIMPQITTREHVGTAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRTFLN 421

Query: 419 QSPSDLSSED 428
           Q   + S  D
Sbjct: 422 QRTDEYSPPD 431


>gi|229591850|ref|YP_002873969.1| flagellum-specific ATP synthase [Pseudomonas fluorescens SBW25]
 gi|229363716|emb|CAY51109.1| flagellum-specific ATP synthase [Pseudomonas fluorescens SBW25]
          Length = 452

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/365 (40%), Positives = 217/365 (59%), Gaps = 3/365 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +++ PVG    I+ G  V       R+       GRV++  G+ +DG   +
Sbjct: 68  EVMGFSGNKIFLMPVGSLAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGM 127

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D        + P +NR  +      GIR I+    +  GQR+G+FAG+G+GKS LL 
Sbjct: 128 KAEDWVPMDGPTINP-LNRNPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLG 186

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +  
Sbjct: 187 MMTRFTEADIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDAPLMRLRAAMYC 246

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER G
Sbjct: 247 TRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAG 306

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+S
Sbjct: 307 NAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASIS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     + +          L  R++++RD+  +G Y  G D   D A+   P +  +L+
Sbjct: 367 RVMPAVVTPEHMARAQHFKQLWSRYQQSRDLISVGAYVAGGDRDTDLAIALQPQLVTYLR 426

Query: 419 QSPSD 423
           Q  +D
Sbjct: 427 QGLND 431


>gi|290475706|ref|YP_003468595.1| flagellum-specific ATP synthase [Xenorhabdus bovienii SS-2004]
 gi|289175028|emb|CBJ81831.1| flagellum-specific ATP synthase [Xenorhabdus bovienii SS-2004]
          Length = 454

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 202/328 (61%), Gaps = 2/328 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P+DG  +   G  ++     + P + R  +      G+R I+    +  GQ
Sbjct: 117 GRVLDGSGRPLDGFPAPDTGYRALLTTPPINP-LQRTPISDVLDVGVRAINSLLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVVV 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGVEGLARSVVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    + G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RS
Sbjct: 296 YPPSVFAKLPALVERAGNGVSDGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D  + V     L+  ++  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDNDHYRRVQQFKQLLASYQRNRDLINVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           +LD+A+   P +  FL+Q  S+ S  D 
Sbjct: 416 LLDRAIQLYPHMAQFLQQGMSERSEYDA 443


>gi|51597645|ref|YP_071836.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|186896779|ref|YP_001873891.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis PB1/+]
 gi|51590927|emb|CAH22583.1| Putative flagellum export-specific ATPase [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699805|gb|ACC90434.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis PB1/+]
          Length = 446

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/363 (41%), Positives = 209/363 (57%), Gaps = 8/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + DI Y+ P      +  G  VF     G   I  S  W GRVIN LG+PIDG  
Sbjct: 60  QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPIDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG      + + ++ P + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS L
Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE  L    + KSVVV A +DESP++R  A  
Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              +IA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 237 LCHSIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G +TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S
Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR   +   + + K  S L      +   + +  +GGY  G D + D+AVH  P I  F
Sbjct: 356 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415

Query: 417 LKQ 419
           L+Q
Sbjct: 416 LRQ 418


>gi|313110384|ref|ZP_07796272.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           39016]
 gi|310882774|gb|EFQ41368.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           39016]
          Length = 429

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R++      G+V++ LG+P DG     +      +    P  M+R+ +E+    G+R
Sbjct: 83  GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 141

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGREVREFIE  L
Sbjct: 142 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 201

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI
Sbjct: 202 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF+ LPRL+ER G SE+  G+ITA+ +VLV+GD+ ++P+AD  R
Sbjct: 262 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 319

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   + ++EE   +
Sbjct: 320 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 379

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             IG Y+ G D   D+A+ ++  I  +L+Q   + S
Sbjct: 380 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 415


>gi|157961192|ref|YP_001501226.1| flagellum-specific ATP synthase [Shewanella pealeana ATCC 700345]
 gi|157846192|gb|ABV86691.1| flagellar protein export ATPase FliI [Shewanella pealeana ATCC
           700345]
          Length = 446

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 162/421 (38%), Positives = 242/421 (57%), Gaps = 11/421 (2%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           LAQ  +     LV   G +  +  V  T+        +G     +    D + +VI  + 
Sbjct: 12  LAQHQQKVHPFLVEASGQLVRV--VGLTLEATGCRAAIGSLCAIETMAGDLIAEVIGFDD 69

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
            ++Y+ P+     +  G  V   G +  ++      GRV++  G PIDG  +L K D   
Sbjct: 70  QLLYLMPIEELRGVLPGAKVTPLGEQSGLNVGLSLLGRVLDGSGLPIDGLGNL-KTD--- 125

Query: 127 EIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +  S   PA+N   R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QKASSHAPAINPLARRAISEPLDVGVRAINSMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGG 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A 
Sbjct: 306 KQGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  + +  +  +   +++ +D+  IG Y  G D  +D A+   P +  FL+Q+  
Sbjct: 366 MVISPEHLEAMRKVKQVYSLYQQNKDLISIGAYSQGSDPRIDNAIRLQPAMNAFLRQTMK 425

Query: 423 D 423
           D
Sbjct: 426 D 426


>gi|237678820|emb|CAQ57547.1| RhcN protein [Bradyrhizobium elkanii]
          Length = 451

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/360 (41%), Positives = 217/360 (60%), Gaps = 4/360 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSL 119
           +VI +  D V + P+G    +S    V   GR ++ S      GRVI++ G+P+DG   +
Sbjct: 75  EVIGLLPDGVLLTPIGDMVGLSNRAEVVTTGRMQVVSVGPDLLGRVIDSFGRPLDGKGPI 134

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G++   +  K P  M R+ +E+ F  G+RV+D       GQRIG++  +G GKSTL+S
Sbjct: 135 KAGEVR-PLRGKAPNPMKRRGIEQSFPLGVRVLDGLLTCGEGQRIGIYGDAGCGKSTLMS 193

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
              +    D  I++L+GERGREVREFIE +LG+ L++SVVVV TSD S + R      A 
Sbjct: 194 QIVKGAAADVTIVALIGERGREVREFIERHLGEALRRSVVVVETSDRSAMERAQCAHMAT 253

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +G  V+L++DS+TRF+ ++REI   +GE P  RG+P SVF+ LP LLER G 
Sbjct: 254 ALAEYFRDQGLRVVLMMDSLTRFSRAMREIGLAAGEPPTRRGFPPSVFALLPGLLERAGM 313

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
              E G+ITA  +VLV+GD   DPIA+  R ILDGHI+L+R+LA    +P +D L+S SR
Sbjct: 314 G--EHGSITAFYTVLVEGDGTGDPIAEESRGILDGHIILSRALASREHFPAIDVLSSRSR 371

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           + D   S   +K  S    L+ R+ E   +  +G Y+ G D + D+A+  +  +  FL+Q
Sbjct: 372 VMDAIVSVQHRKAASLFRDLLSRYAEAEFLIKVGEYKQGSDPLTDRAIASIEELRTFLRQ 431


>gi|146282926|ref|YP_001173079.1| flagellum-specific ATP synthase [Pseudomonas stutzeri A1501]
 gi|145571131|gb|ABP80237.1| flagellum-specific ATP synthase FliI [Pseudomonas stutzeri A1501]
          Length = 459

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/354 (41%), Positives = 219/354 (61%), Gaps = 7/354 (1%)

Query: 70  VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +Y+ PVG    I+ G  V    + GR  +  S    GRV++  G+ +DG   +   D  +
Sbjct: 84  LYLMPVGSLAGIAPGARVVPLVNTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDW-V 140

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 141 PMDGPVINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 200

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFIE+ LG+ ++K+SVVV + +D++P++R  A      IAEYF
Sbjct: 201 ADIIVVGLIGERGREVKEFIENILGEESIKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 260

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G +E+  G
Sbjct: 261 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLVERAGNAERGGG 320

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIAD+ R +LDGHIVL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 321 SITAFYTVLSEGDDQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPQVV 380

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           SA+  +       L  R++++RD+  +G Y PG D   D A+ +   +  +L+Q
Sbjct: 381 SAEHVRASQRFKQLWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMVSYLRQ 434


>gi|146293669|ref|YP_001184093.1| flagellum-specific ATP synthase [Shewanella putrefaciens CN-32]
 gi|145565359|gb|ABP76294.1| flagellar protein export ATPase FliI [Shewanella putrefaciens
           CN-32]
 gi|319427068|gb|ADV55142.1| flagellar protein export ATPase FliI [Shewanella putrefaciens 200]
          Length = 445

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/383 (39%), Positives = 229/383 (59%), Gaps = 3/383 (0%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
           D + +V+  + +++Y+ P+     +  G  V   G +  +       GRV++  G P+DG
Sbjct: 59  DLVAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L     +    S + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 119 LGALQTDQYAPRHNSAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVV+ A +D SP++R  A
Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+
Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  
Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIE 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P + 
Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL+Q+  D  S    Q +  +L
Sbjct: 418 AFLRQTMRDAFSFADSQSMLAQL 440


>gi|120598253|ref|YP_962827.1| flagellum-specific ATP synthase [Shewanella sp. W3-18-1]
 gi|120558346|gb|ABM24273.1| flagellar protein export ATPase FliI [Shewanella sp. W3-18-1]
          Length = 445

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/383 (39%), Positives = 229/383 (59%), Gaps = 3/383 (0%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
           D + +V+  + +++Y+ P+     +  G  V   G +  +       GRV++  G P+DG
Sbjct: 59  DLVAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L     +    S + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 119 LGALQTDQYAPRHNSAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVV+ A +D SP++R  A
Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+
Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  
Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIE 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P + 
Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL+Q+  D  S    Q +  +L
Sbjct: 418 AFLRQTMRDAFSFADSQSMLAQL 440


>gi|313847592|emb|CBY16580.1| putative type III secretion or flagellar-type ATP synthase
           [Chlamydophila psittaci RD1]
 gi|328914225|gb|AEB55058.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila psittaci
           6BC]
          Length = 442

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 16/386 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQNFAFLSPLGELTGVSPSSEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118

Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            KG L     +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GK
Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177

Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           S+LL M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR 
Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPR
Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 297

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+   YP +D
Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAID 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  
Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FLKQ   D+  +  ++E +++L+
Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438


>gi|197120196|ref|YP_002140623.1| flagellum-specific ATPase FliI [Geobacter bemidjiensis Bem]
 gi|197089556|gb|ACH40827.1| flagellum-specific ATPase FliI [Geobacter bemidjiensis Bem]
          Length = 434

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/391 (39%), Positives = 225/391 (57%), Gaps = 8/391 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINA 108
           VH   ++    +V+    +   + P+G    + LG ++     +  +       GRVI+ 
Sbjct: 46  VHSEGHAPIPAEVVGFRENKTLLMPLGELRGVGLGSVISVRREKAALGVGPALLGRVIDG 105

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PID    +   D        V P M R+ + K    GIR I+       GQR+G+ A
Sbjct: 106 LGQPIDDKGPIEVADEYPIYALPVNP-MKRRPIRKPLNLGIRAINGLLTCGEGQRVGIMA 164

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDES 227
           GSG+GKSTLL M AR    D  +I+L+GERGRE+REFIE D   + L+KSVVVVATSD+ 
Sbjct: 165 GSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQKEGLRKSVVVVATSDQP 224

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R      A TIAEYF ++G  VLL++DS TRFA ++RE+    GE P  +GY  SVF
Sbjct: 225 PLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVF 284

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRLLER G    + G+IT + +VLV+GD+ N+PI+D++RSILDGHI+L R LA    
Sbjct: 285 AALPRLLERTG--NFQGGSITGLYTVLVEGDDFNEPISDAMRSILDGHIILTRELAARNI 342

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YPP+D + S SR+     + + K L      L+  + +  D+  IG Y+ G +  +D AV
Sbjct: 343 YPPIDLMNSASRVMSDVATKEHKALAGRFKELLATYRQAEDMINIGAYKSGSNPKIDYAV 402

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            ++  +  +LKQ   D+  E  F+E    L+
Sbjct: 403 AKMEQMIGYLKQ---DVGDEVNFEESIAALE 430


>gi|170022963|ref|YP_001719468.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis YPIII]
 gi|169749497|gb|ACA67015.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII]
          Length = 446

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/363 (41%), Positives = 208/363 (57%), Gaps = 8/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + DI Y+ P      +  G  VF     G   I  S  W GRVIN LG+PIDG  
Sbjct: 60  QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPIDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG      + + ++ P + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS L
Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE  L    + KSVVV A +DESP++R  A  
Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 237 LCHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G +TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S
Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR   +   + + K  S L      +   + +  +GGY  G D + D+AVH  P I  F
Sbjct: 356 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415

Query: 417 LKQ 419
           L+Q
Sbjct: 416 LRQ 418


>gi|300697472|ref|YP_003748133.1| type III secretion system ATPase [Ralstonia solanacearum CFBP2957]
 gi|299074196|emb|CBJ53741.1| type III secretion system ATPase [Ralstonia solanacearum CFBP2957]
          Length = 439

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/371 (40%), Positives = 216/371 (58%), Gaps = 5/371 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G+V+  +     + P      +S    V   GR   +   A   GRV++ LG+P DG   
Sbjct: 60  GEVVGFSEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGAGLLGRVLDGLGRPADGGPP 119

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +  + + +  P  M R+ VE    TG+RVID    L  GQR+G+FA +G+GKSTL+
Sbjct: 120 LDVVE-HVPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLM 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I L+GERGREVREFIE  LG + +++SVVV ATSD S + R  A   
Sbjct: 179 GMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAHV 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 239 GTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S    G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L S+
Sbjct: 299 GMS--STGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSL 356

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +    +       +  L+ ++ E   +  +G Y+ G D + D AV     + +FL
Sbjct: 357 SRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMEEFL 416

Query: 418 KQSPSDLSSED 428
           +Q   +  S D
Sbjct: 417 RQRTDEWCSPD 427


>gi|320201520|gb|EFW76099.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           EC4100B]
          Length = 438

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/382 (40%), Positives = 222/382 (58%), Gaps = 8/382 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P++
Sbjct: 56  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 115

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 116 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 175

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 176 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 235

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 236 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 295

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 296 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 353

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  +     +  IG Y  G D   DKA+    +I 
Sbjct: 354 LSASRVMHNVVTSEHLRAAAECKKLIATYNNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 413

Query: 415 DFLKQSPSDLSS-----EDVFQ 431
            F++QS  D+SS     E++F+
Sbjct: 414 SFIQQSTKDISSYEKTIENLFK 435


>gi|329942353|ref|ZP_08291163.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila psittaci Cal10]
 gi|332286995|ref|YP_004421896.1| type III secretion system ATPase [Chlamydophila psittaci 6BC]
 gi|325507218|gb|ADZ18856.1| type III secretion system ATPase [Chlamydophila psittaci 6BC]
 gi|328815263|gb|EGF85251.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila psittaci Cal10]
          Length = 410

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 16/386 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 29  EVVGFTQNFAFLSPLGELTGVSPSSEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEI-- 86

Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            KG L     +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GK
Sbjct: 87  -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 145

Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           S+LL M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR 
Sbjct: 146 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 205

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPR
Sbjct: 206 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 265

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+   YP +D
Sbjct: 266 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAID 323

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  
Sbjct: 324 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 383

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FLKQ   D+  +  ++E +++L+
Sbjct: 384 LNRFLKQ---DIHEKTNYEEASQQLR 406


>gi|332669193|ref|YP_004452201.1| FliI/YscN family ATPase [Cellulomonas fimi ATCC 484]
 gi|332338231|gb|AEE44814.1| ATPase, FliI/YscN family [Cellulomonas fimi ATCC 484]
          Length = 444

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/333 (43%), Positives = 210/333 (63%), Gaps = 4/333 (1%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GRV++ LG+PIDG   L +    + + S+ P  + R RV++    G+RV+
Sbjct: 94  LRVPVGPGLLGRVLDGLGRPIDGKGPL-RARAWVPLDSRAPHPLERARVDEPLDLGVRVL 152

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D    +  GQR+G+FAGSG+GKS+LLSM AR    +  +I+LVGERGREVREF+ED LG 
Sbjct: 153 DTLVTVGRGQRLGLFAGSGVGKSSLLSMVARGTDAEVSVIALVGERGREVREFLEDDLGP 212

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           + L +SVVV+ATSDE P++R  +   A  IAE    +G + +L++DS+TR A + REI  
Sbjct: 213 EGLARSVVVIATSDEPPLVRLRSAFLATRIAEALRDEGRHAVLMMDSLTRVAMAQREIGL 272

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE P  RGYP S F+ L +LLER G      G++T + +VLVDGD+HN+PIAD+ RSI
Sbjct: 273 SVGEPPATRGYPPSTFALLAQLLERAG--TGATGSVTGLYTVLVDGDDHNEPIADAARSI 330

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGH+VL+R LA  G +P VD L S+SR+A +  + +++     L  ++    + +D+  
Sbjct: 331 LDGHVVLDRRLAVAGHFPSVDALGSISRVASRVTTPEQRDAARRLRAVMAARRQAQDLLD 390

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           +G Y  G + ++D AV     I  FL+Q   D+
Sbjct: 391 VGAYVAGSNPLVDAAVTHGRAIDAFLRQDIEDV 423


>gi|312962273|ref|ZP_07776765.1| flagellum-specific ATP synthase [Pseudomonas fluorescens WH6]
 gi|311283610|gb|EFQ62199.1| flagellum-specific ATP synthase [Pseudomonas fluorescens WH6]
          Length = 452

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/356 (41%), Positives = 212/356 (59%), Gaps = 3/356 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           +++ PVG    I+ G  V       R+       GRV++  G+ +DG   +   D     
Sbjct: 77  IFLMPVGSLAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P +NR  +      GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LNRNPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG + LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHSLGAEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     + 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVTP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +          L  R++++RD+  +G Y  G D   D A+   P +  +L+Q  +D
Sbjct: 376 EHMTRAQQFKQLWSRYQQSRDLISVGAYVAGGDRDTDLAIALQPQLVTYLRQGLND 431


>gi|260869686|ref|YP_003236088.1| translocator EscN [Escherichia coli O111:H- str. 11128]
 gi|221361425|emb|CAX18578.1| Type III secretion system, ATPase, LEE associated [Escherichia
           coli]
 gi|257766042|dbj|BAI37537.1| translocator EscN [Escherichia coli O111:H- str. 11128]
 gi|323178908|gb|EFZ64484.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 1180]
          Length = 446

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/382 (40%), Positives = 222/382 (58%), Gaps = 8/382 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P++
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  +     +  IG Y  G D   DKA+    +I 
Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYNNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421

Query: 415 DFLKQSPSDLSS-----EDVFQ 431
            F++QS  D+SS     E++F+
Sbjct: 422 SFIQQSTKDISSYEKTIENLFK 443


>gi|15596894|ref|NP_250388.1| type III secretion system ATPase [Pseudomonas aeruginosa PAO1]
 gi|9947670|gb|AAG05086.1|AE004596_12 ATP synthase in type III secretion system [Pseudomonas aeruginosa
           PAO1]
          Length = 440

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R++      G+V++ LG+P DG     +      +    P  M+R+ +E+    G+R
Sbjct: 94  GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 152

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGREVREFIE  L
Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI
Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF+ LPRL+ER G SE+  G+ITA+ +VLV+GD+ ++P+AD  R
Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   + ++EE   +
Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             IG Y+ G D   D+A+ ++  I  +L+Q   + S
Sbjct: 391 LKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETS 426


>gi|304408577|ref|ZP_07390198.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|307305405|ref|ZP_07585153.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
 gi|304352398|gb|EFM16795.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|306911708|gb|EFN42133.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
          Length = 443

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/367 (43%), Positives = 220/367 (59%), Gaps = 6/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+ +  +   + P  +   +  G+LV   G     P      GRV++ LG P+DG    
Sbjct: 65  EVVAVKGNEALLSPFDVTAGLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDGYGLT 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                  +     P  ++RQ ++     GIR ID       GQRIG+FA +G GKSTLL 
Sbjct: 125 ATALRPNQ--GSAPNPLSRQLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKSTLLG 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
           M A     D ++++LVGERGREVREFIE  L    + ++V+VVATSD  P+ R  A LTA
Sbjct: 183 MIAAHCQADVIVLALVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLTA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIAEYF  +G NVLL++DS+TRFA S REIA  +GE PV+ GYP SVF  L  L+ER G
Sbjct: 243 TTIAEYFRDQGKNVLLMVDSLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P+   +G+IT + +VLV+GDN N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASVS
Sbjct: 303 PA--AQGSITGIYTVLVEGDNMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASVS 360

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ D+  S +++   + +  L+  ++E + +  +G Y  G D   D+AV +   I  FL 
Sbjct: 361 RVMDQIVSPEQRCHAAKMRQLLALYQEVQLLIRVGEYVKGADKETDEAVARHQDIQQFLC 420

Query: 419 QSPSDLS 425
           QS ++ S
Sbjct: 421 QSVNEFS 427


>gi|54124956|gb|AAV30224.1| AscN [Aeromonas hydrophila]
          Length = 440

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/380 (40%), Positives = 224/380 (58%), Gaps = 20/380 (5%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           F  HQ   +  LG++  I+ +   + P G   ++ +G+ +               G+V++
Sbjct: 67  FAQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGEHLL--------------GQVLD 110

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P  G   L +      +    P  M+R+R+E+    GIR ID       GQR+G+F
Sbjct: 111 GLGNPFSGGQ-LPEPAAWYPVYRDAPAPMSRKRIEQPISLGIRAIDGLLTCGEGQRMGIF 169

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           A +G GKSTLL+   RS   D  +++L+GERGREVREFIE  LG+  LKK+V+VVATSD 
Sbjct: 170 AAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDR 229

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RGYP SV
Sbjct: 230 PAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSV 289

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LPRL+ER G S  +KG+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA   
Sbjct: 290 FAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAAN 347

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L S SR+ ++  + D +     L   + ++EE   +  IG Y+ G D + D+A
Sbjct: 348 HYPAIDVLRSASRVMNQIITPDHQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEA 407

Query: 407 VHQVPIIYDFLKQSPSDLSS 426
           + ++  I  +L+Q   + S+
Sbjct: 408 IARIEAIRQWLRQRTHEPSA 427


>gi|167577319|ref|ZP_02370193.1| type III secretion system ATPase [Burkholderia thailandensis TXDOH]
          Length = 442

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/371 (42%), Positives = 221/371 (59%), Gaps = 5/371 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 65  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 125 DY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 362 RIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 421

Query: 419 QSPSDLSSEDV 429
           Q   + S  D 
Sbjct: 422 QRTDEYSPPDA 432


>gi|312967946|ref|ZP_07782158.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 2362-75]
 gi|312287507|gb|EFR15415.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 2362-75]
 gi|320193811|gb|EFW68444.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           WV_060327]
          Length = 446

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/372 (40%), Positives = 218/372 (58%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P++
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +           + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  ++    +  IG Y  G D   DKA+    +I 
Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421

Query: 415 DFLKQSPSDLSS 426
           +F++QS  D+SS
Sbjct: 422 NFIQQSTKDISS 433


>gi|53716417|ref|YP_106211.1| type III secretion system ATPase [Burkholderia mallei ATCC 23344]
 gi|52422387|gb|AAU45957.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           ATCC 23344]
          Length = 429

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/370 (42%), Positives = 220/370 (59%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 52  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 111

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 112 DY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 170

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 171 MFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 230

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 231 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 290

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 291 MG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 348

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 349 RIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 408

Query: 419 QSPSDLSSED 428
           Q   + S  D
Sbjct: 409 QRTDEYSPPD 418


>gi|116049647|ref|YP_791548.1| type III secretion system ATPase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254234796|ref|ZP_04928119.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           C3719]
 gi|2459981|gb|AAB86534.1| PscN [Pseudomonas aeruginosa]
 gi|115584868|gb|ABJ10883.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166727|gb|EAZ52238.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           C3719]
          Length = 440

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R++      G+V++ LG+P DG     +      +    P  M+R+ +E+    G+R
Sbjct: 94  GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 152

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGREVREFIE  L
Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI
Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF+ LPRL+ER G SE+  G+ITA+ +VLV+GD+ ++P+AD  R
Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   + ++EE   +
Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             IG Y+ G D   D+A+ ++  I  +L+Q   + S
Sbjct: 391 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 426


>gi|83717873|ref|YP_438941.1| type III secretion system ATPase [Burkholderia thailandensis E264]
 gi|257142044|ref|ZP_05590306.1| type III secretion system ATPase [Burkholderia thailandensis E264]
 gi|83651698|gb|ABC35762.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           thailandensis E264]
          Length = 442

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/370 (42%), Positives = 221/370 (59%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 65  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 125 DY-DALRPVIAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 362 RIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 421

Query: 419 QSPSDLSSED 428
           Q   + S  D
Sbjct: 422 QRTDEYSPPD 431


>gi|285018177|ref|YP_003375888.1| flagellum-specific ATP synthase [Xanthomonas albilineans GPE PC73]
 gi|283473395|emb|CBA15900.1| probable flagellum-specific atp synthase protein [Xanthomonas
           albilineans]
          Length = 458

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 12/341 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGVPLDGKGPIRAEGSVGMAGVSINP--LAREPITTPLDVGVRAINALLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRYTAADIIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD+ W    +  + +L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDIESSVSRVVQDIADEPW----RLRIRALKRLVSAYSSNRDLITIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            G D  +D+A+ + P I +FL Q  +  +     Q+  K+L
Sbjct: 413 RGNDPAVDEALERWPEIMEFLGQDVAKAADLPHSQDALKRL 453


>gi|163789647|ref|ZP_02184085.1| flagellum-specific ATP synthase [Carnobacterium sp. AT7]
 gi|159875179|gb|EDP69245.1| flagellum-specific ATP synthase [Carnobacterium sp. AT7]
          Length = 442

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/424 (38%), Positives = 242/424 (57%), Gaps = 9/424 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           K+  ++ G +S +T +   V  L  +V     ++ +      L +V+    + V + P+ 
Sbjct: 16  KSYYLKMGKVSQVTGLIIKVEGLDAFVGEVCEILIKSSGRVALSEVVGFVDETVLLMPLD 75

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E I  G LV   G+  ++  S    G  ++ LG+P+D   SL    +  ++    P  
Sbjct: 76  ELEGIGPGCLVKPTGKTLKVEISEKLLGNTLDGLGRPMD--TSLVVDGVFYDVNRSSPNP 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R++++    TGI+ ID    +  GQR+G+FAGSG+GKSTLL M AR    D ++I L+
Sbjct: 134 FKRKKIKDVMPTGIKAIDGTLTVGEGQRVGIFAGSGVGKSTLLGMMARYIEADIIVIGLI 193

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV EFIE  LG+   +KSVVV ATSD  P++R      A TIAEYF  +G  V+L
Sbjct: 194 GERGREVLEFIEKDLGEEGYRKSVVVCATSDMPPLVRLKGASVATTIAEYFRDQGKKVVL 253

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G SE   G+ITA  +VL
Sbjct: 254 MMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFTTLPKLLERSGMSEN--GSITAFYTVL 311

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ N+PIADSVR ILDGHIVL+R +A E  YP +D   S+SRL     +    +   
Sbjct: 312 VEGDDMNEPIADSVRGILDGHIVLSRKIASENHYPAIDIQNSISRLMKDITAEKHSETAG 371

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L   +  + +++D+  +G YR G + ++D+AV     I DFLKQ    +     F E+ 
Sbjct: 372 KLKENMAIYSDSKDLIDVGAYRKGSNPLVDRAVQLNTPIKDFLKQR---VDERYAFDEVV 428

Query: 435 KKLQ 438
            +L+
Sbjct: 429 GQLK 432


>gi|94986982|ref|YP_594915.1| type III secretion system ATPase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731231|emb|CAJ54594.1| Type III secretion component protein SctN [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 438

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 160/370 (43%), Positives = 219/370 (59%), Gaps = 6/370 (1%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSME 127
           +  + P+G  + IS    V   G     P      GRV+N LG+PIDG   L +      
Sbjct: 69  VALLTPLGDLQGISPSTEVIPTGMVHAIPVGRELLGRVLNGLGEPIDGKAPL-RLRTYYP 127

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + +  P  M R+ +EK    G+RV+D       GQR+G+FA +G GKSTLLS   +    
Sbjct: 128 VYADPPNPMLRRIIEKPISLGLRVLDGILTCGEGQRMGIFAAAGGGKSTLLSSIIKGTTA 187

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  I++L+GERGREVREFIE  LG + LK+SV+VV+TSD S + R  +  TA  IAEYF 
Sbjct: 188 DVCILALIGERGREVREFIEHDLGAEGLKRSVLVVSTSDRSSMERLKSAYTATAIAEYFR 247

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  VLL++DS+TRF  ++REI   SGE P  RG+P SVFS LP+L+ER G S+K  G+
Sbjct: 248 DQGKKVLLLMDSVTRFGRALREIGLASGEPPTRRGFPPSVFSSLPKLMERAGNSDK--GS 305

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP VD LASVSR+ +   +
Sbjct: 306 ITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAVDVLASVSRVMNAIVT 365

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            + K+    L   + ++ E   +  IG Y+ G D   D A+     I  FL+Q   + S+
Sbjct: 366 KEHKENAGKLRKYLAKYAEVELLVQIGEYKAGNDPAADDAIKHNKGINAFLQQGLDEKST 425

Query: 427 -EDVFQEITK 435
            E   Q + K
Sbjct: 426 FEQTLQALKK 435


>gi|326204623|ref|ZP_08194479.1| ATPase, FliI/YscN family [Clostridium papyrosolvens DSM 2782]
 gi|325985190|gb|EGD46030.1| ATPase, FliI/YscN family [Clostridium papyrosolvens DSM 2782]
          Length = 436

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/419 (38%), Positives = 242/419 (57%), Gaps = 8/419 (1%)

Query: 25  YISSITSVY-YTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           YI  ++ V   T+      V +G+   +H    +    +V+    + V + P+G    + 
Sbjct: 21  YIGKVSKVVGLTIESDGPQVSIGNLCNIHISGGNKLKAEVVGFKDEKVLLMPLGEMLGMG 80

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   +++      GRV++ LG PID   SL       +  +K P  + R+R+
Sbjct: 81  PGSTVSANGDILKVAVGPELIGRVLDGLGNPIDDKGSLQSKHF-YKTDNKPPNPLTRKRI 139

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+L+GERGRE
Sbjct: 140 SEPLPLGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMVARNTKADINVIALIGERGRE 199

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E  L D  L +SVVVVATSD+  ++R    + A  IAEYF   G +VLL++DS+T
Sbjct: 200 VREFLEKDLTDEGLARSVVVVATSDQPALIRLKGAMVATAIAEYFRDCGKDVLLLMDSLT 259

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + RE+  + GE PV+RGY  SVFS  P+LLER G S  +KG+IT + +VLVDGD+ 
Sbjct: 260 RYAMAQREVGLSIGEPPVSRGYTPSVFSVFPKLLERAGTS--DKGSITGLYTVLVDGDDL 317

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            +P+ D+ R ILDGHIVL+R++A +  YP +D LASVSR+       D KK  + +  ++
Sbjct: 318 TEPVTDTARGILDGHIVLSRAMANKNHYPAIDVLASVSRVMGDIIDKDHKKSANEIKKIM 377

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
               +  D+  IG Y  G +  +D A+  +  I  FL+Q   + +S ED+  ++   L+
Sbjct: 378 AVHRDAEDLINIGAYVKGSNDKIDYAIENIDDITSFLQQETDEKVSFEDIHSQVLSLLK 436


>gi|296389919|ref|ZP_06879394.1| type III secretion system ATPase [Pseudomonas aeruginosa PAb1]
          Length = 440

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R++      G+V++ LG+P DG     +      +    P  M+R+ +E+    G+R
Sbjct: 94  GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 152

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGREVREFIE  L
Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+  L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI
Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF+ LPRL+ER G SE+  G+ITA+ +VLV+GD+ ++P+AD  R
Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   + ++EE   +
Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             IG Y+ G D   D+A+ ++  I  +L+Q   + S
Sbjct: 391 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 426


>gi|167615466|ref|ZP_02384101.1| type III secretion system ATPase [Burkholderia thailandensis Bt4]
          Length = 388

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/371 (42%), Positives = 221/371 (59%), Gaps = 5/371 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 11  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 70

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 71  DY-DALRPVIAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 129

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 130 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 189

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 190 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 249

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 250 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 307

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 308 RIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 367

Query: 419 QSPSDLSSEDV 429
           Q   + S  D 
Sbjct: 368 QRTDEYSPPDA 378


>gi|167566310|ref|ZP_02359226.1| type III secretion system ATPase [Burkholderia oklahomensis EO147]
          Length = 444

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 221/370 (59%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 65  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGDGILGRVIDSFGEPIDGRGPL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +++L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 184 MFARGASCDINVVALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 362 RIMPQITTREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRTFLN 421

Query: 419 QSPSDLSSED 428
           Q   + S  D
Sbjct: 422 QRTDEYSPPD 431


>gi|188991614|ref|YP_001903624.1| flagellum-specific ATP synthase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733374|emb|CAP51575.1| flagellum-specific ATP synthase [Xanthomonas campestris pv.
           campestris]
          Length = 458

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 204/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD  W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I DFL Q
Sbjct: 413 RGSDPATDEALARWPEIVDFLGQ 435


>gi|172064918|ref|YP_001815630.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
 gi|171997160|gb|ACB68077.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
          Length = 463

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/368 (42%), Positives = 224/368 (60%), Gaps = 10/368 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117
           +V+  + D+  + P G    +S    V    R    RI P     GRVI++LG+PIDG  
Sbjct: 85  EVVGFSRDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L + D    +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL
Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + MFAR    D  +I+L+GERGREVREF E  LG D + +SVVV ATSD S I R  A  
Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAY 261

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER
Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G+ITA+ +VL + ++  DPIA+ VR ILDGH++L+R +A + RYP +D L S
Sbjct: 322 AGRSAL--GSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +  S +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I DF
Sbjct: 380 LSRVMTQVVSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRDF 439

Query: 417 LKQSPSDL 424
           L Q P+DL
Sbjct: 440 LGQ-PTDL 446


>gi|89898777|ref|YP_515887.1| type III secretion system ATPase [Chlamydophila felis Fe/C-56]
 gi|89332149|dbj|BAE81742.1| type III secretory flagellar biosynthesis ATP synthase
           [Chlamydophila felis Fe/C-56]
          Length = 442

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/386 (40%), Positives = 233/386 (60%), Gaps = 16/386 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQHFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118

Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            KG L     +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GK
Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177

Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           S+LL M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR 
Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPR
Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPR 297

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D
Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAID 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  
Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDRGVDFAIDHIDK 415

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FLKQ   D+  +  ++E +++L+
Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438


>gi|238916749|ref|YP_002930266.1| Na+-transporting two-sector ATPase [Eubacterium eligens ATCC 27750]
 gi|238872109|gb|ACR71819.1| Na+-transporting two-sector ATPase [Eubacterium eligens ATCC 27750]
          Length = 449

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/373 (40%), Positives = 230/373 (61%), Gaps = 7/373 (1%)

Query: 50  VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           ++   NS  L  +V+  N   V + P  + + I  G +V +  +   +       G  ++
Sbjct: 47  IYSADNSQELYAEVVGFNDSSVLLMPFDVVDGIGPGCVVENMEKPLTVKVGDGILGHTLD 106

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P DG +     +  +E  +  P  M+R+ + +    G++ +D    +  GQRIG+F
Sbjct: 107 GLGNPTDGSELELTDEYPVE--AAPPDPMDREIISQVLPLGVKAVDGLLTVGKGQRIGIF 164

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKSTLL MFAR+   D  +I+L+GERGREVREF+E  LG + + +SV+VVATSD+
Sbjct: 165 AGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGPEGMARSVLVVATSDK 224

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R  A  TA  IAEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP SV
Sbjct: 225 PALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSV 284

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +SE+P+LLER G S  +KG+IT + +VLVDGD+ N+PI D+ RSILDGHIVL+R L ++ 
Sbjct: 285 YSEMPKLLERAGMS--DKGSITGLYTVLVDGDDFNEPITDTARSILDGHIVLSRKLGQKN 342

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L S+SR   +      K++   + +++  + E  D+  IG Y+ G +  +D A
Sbjct: 343 HYPAIDVLQSISRCMSQIVDRQHKQMAGRMKNVMATYNEAEDLINIGAYKSGSNKNIDYA 402

Query: 407 VHQVPIIYDFLKQ 419
           ++++  +  FL Q
Sbjct: 403 IYKIDTVNKFLMQ 415


>gi|126176164|ref|YP_001052313.1| FliI/YscN family ATPase [Shewanella baltica OS155]
 gi|125999369|gb|ABN63444.1| ATPase, FliI/YscN family [Shewanella baltica OS155]
          Length = 449

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/385 (40%), Positives = 234/385 (60%), Gaps = 16/385 (4%)

Query: 45  LGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD    +G+N   +  +V+  + D++ + P+   + +  G  V        I+      
Sbjct: 43  MGDRCQIEGRNGRLIEAEVVGFHRDVLCLMPIEPTQGLMPGARVLPITDEQTIAIGDGLL 102

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA------MNRQRVEKGFKTGIRVIDIFT 156
           GRV++ LG+P+D   SLG  DL+   +S+VP +      + RQ + +    GIR I+   
Sbjct: 103 GRVLDGLGQPLD---SLG--DLT--DISQVPQSHTSYNPLLRQPIRQPLDVGIRAINSLL 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREVREFIE+ LG+   K
Sbjct: 156 PIGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEETLGEEGRK 215

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V++ A +D +P++R  A   + +IA  F  +G  VLL++DS+TR+A + REIA + GE
Sbjct: 216 RAVIIAAPADTTPLMRLRAMRLSHSIACAFRDQGKQVLLLVDSLTRYAQAQREIALSLGE 275

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP S F++LPRL+E  G  E   G +TA  +VL +GD+  DP+AD+ R+ILDGH
Sbjct: 276 PPATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVLAEGDDQQDPVADAARAILDGH 335

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+R LAE+G +P +D  ASVSRLA    ++   +      HL+ R+ E RD+  +GGY
Sbjct: 336 IVLSRKLAEQGHFPAIDINASVSRLAMHIATSSSIEQSQIFRHLLSRYNEVRDLLPLGGY 395

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
           + G D  +D AV   P +  FL+Q+
Sbjct: 396 QAGQDPEMDLAVRVYPEMARFLRQT 420


>gi|62184683|ref|YP_219468.1| type III secretion system ATPase [Chlamydophila abortus S26/3]
 gi|62147750|emb|CAH63494.1| putative type III secretion or flagellar-type ATP synthase
           [Chlamydophila abortus S26/3]
          Length = 442

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 16/386 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQNFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118

Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            KG L     +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GK
Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177

Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           S+LL M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR 
Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPR
Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 297

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+   YP +D
Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAID 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  
Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FLKQ   D+  +  ++E +++L+
Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438


>gi|322421732|ref|YP_004200955.1| FliI/YscN family ATPase [Geobacter sp. M18]
 gi|320128119|gb|ADW15679.1| ATPase, FliI/YscN family [Geobacter sp. M18]
          Length = 441

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/391 (39%), Positives = 228/391 (58%), Gaps = 20/391 (5%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINA 108
           VH   ++    +V+    +   + P+G    + LG ++     +  +       GRVI+ 
Sbjct: 47  VHSEGHAPIPAEVVGFRDNKTLLMPLGELRGVGLGSVISVRREKAALGVGPALLGRVIDG 106

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVP------PAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           LG+PID      KG +  E++ + P        M R+ + K    GIR I+       GQ
Sbjct: 107 LGEPIDD-----KGPI--EVVDEYPIYALPVNPMKRRPIRKPLNLGIRAINGLLTCGEGQ 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVV 221
           R+G+ AGSG+GKSTLL M AR    D  +I+L+GERGRE+REFIE D   + L+KSVVVV
Sbjct: 160 RVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQAEGLRKSVVVV 219

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+ P++R      A TIAEYF ++G  VLL++DS TRFA ++RE+    GE P  +G
Sbjct: 220 ATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKG 279

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF+ LPRLLER G    + G+IT + +VLV+GD+ N+PI+D++RSILDGHI+L R 
Sbjct: 280 YTPSVFAALPRLLERTG--NFQGGSITGLYTVLVEGDDFNEPISDAMRSILDGHIILTRE 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YPP+D L S SR+     S + + L       +  + +  D+  IG Y+ G + 
Sbjct: 338 LAARNIYPPIDLLNSASRVMSDVTSREHRALAGQFKETLATYRQAEDMINIGAYKAGSNA 397

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            +D A+ ++  +  +LKQ   D++ E+ F+E
Sbjct: 398 KIDMAIAKMEQMIAYLKQ---DVADEENFEE 425


>gi|62180006|ref|YP_216423.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127639|gb|AAX65342.1| Secretion system apparatus SsaN [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322714473|gb|EFZ06044.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 433

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTAGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|120597297|ref|YP_961871.1| FliI/YscN family ATPase [Shewanella sp. W3-18-1]
 gi|146294558|ref|YP_001184982.1| FliI/YscN family ATPase [Shewanella putrefaciens CN-32]
 gi|120557390|gb|ABM23317.1| ATPase, FliI/YscN family [Shewanella sp. W3-18-1]
 gi|145566248|gb|ABP77183.1| ATPase, FliI/YscN family [Shewanella putrefaciens CN-32]
          Length = 449

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 140/319 (43%), Positives = 204/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P+D    L       +  +   P + RQ + +    GIR I+   P+  GQ
Sbjct: 103 GRVLDGLGQPLDLFGDLTDVSQVQQSHTSYNPLL-RQPIRQPLDVGIRAINSLLPIGRGQ 161

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           R+G+FAGSG+GKS LL M  R    D V++ L+GERGREVREFIE+ LG+   K++V++ 
Sbjct: 162 RLGLFAGSGVGKSVLLGMMTRFTDADVVVVGLIGERGREVREFIEETLGEEGRKRAVIIA 221

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D +P++R  A   + +IA  F  +G  VLL++DS+TR+A + REIA + GE P  +G
Sbjct: 222 APADTTPLMRLRAMRLSHSIACAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKG 281

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP S F++LPRL+E  G  E   G +TA  +VLV+GD+  DP+AD+ R+ILDGHIVL+R 
Sbjct: 282 YPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVLVEGDDQQDPVADAARAILDGHIVLSRK 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE+G +P +D  ASVSRLA +  +A   +      H++ R+ E RD+  +GGY+ G D 
Sbjct: 342 LAEQGHFPAIDINASVSRLAMQIATASSIEQSQIFRHILSRYNEVRDLLPLGGYQAGQDP 401

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D AV   P +  FL+Q+
Sbjct: 402 EMDLAVRVYPEMAKFLRQT 420


>gi|224584074|ref|YP_002637872.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224468601|gb|ACN46431.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 433

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTTGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|310816825|ref|YP_003964789.1| H+-transporting two-sector ATPase, flagellum-specific
           [Ketogulonicigenium vulgare Y25]
 gi|308755560|gb|ADO43489.1| H+-transporting two-sector ATPase, flagellum-specific
           [Ketogulonicigenium vulgare Y25]
          Length = 452

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 162/418 (38%), Positives = 236/418 (56%), Gaps = 4/418 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I   T     +  L+ +  LGD +           +VIR+ ++ V   P G+ + +++
Sbjct: 31  GRILRATGGTLGIAGLAAFSRLGDRITVLAHGGPLQAEVIRVGVEEVTAVPEGVADGVAV 90

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
            D V   G  R  P   W GRVI+  G  +DG   L  G +  ++    PPA  R+ +  
Sbjct: 91  DDRVILQGAPRFCPDDSWIGRVIDPDGAALDGRPLL-HGLVPRDLRQSPPPAAARRAMGA 149

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
             +TG  V D   P+  GQR+G+FAGSG+GKSTLL   ARS   D ++I LVGERGREVR
Sbjct: 150 RLRTGYMVFDTLLPIVQGQRLGLFAGSGVGKSTLLGGLARSIAADVIVIGLVGERGREVR 209

Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            FIE+ LG   + ++VVV ATSD +P  R+     A T+AEYF  +G  VLL+LDS+TRF
Sbjct: 210 HFIEEVLGPQGMARAVVVAATSDAAPQQRRRCAWAATTVAEYFRDQGRQVLLMLDSVTRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + RE+A+ +GE    RGYP S    +  L ER GP   ++G+ITA+ SVLV G +  +
Sbjct: 270 AEAHRELASAAGEAAALRGYPASTGPTIAALCERAGPGMGQQGDITAIYSVLVQGSDMEE 329

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+AD +R  LDGH++L+R++AE GR+P VD L SVSR    A S  E  L++     + +
Sbjct: 330 PVADMLRGTLDGHVILDRAIAESGRFPAVDVLRSVSRSLPAAASLPENALIAEARSHMGQ 389

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS--PSDLSSEDVFQEITKKLQ 438
           ++    +   G Y  G D I+D A+   P + + L QS  PS+ ++    +++   L+
Sbjct: 390 YDRAALMIRAGLYVGGSDPIVDAAIAARPGLENLLAQSNLPSNAAAFAALRQVLTPLR 447


>gi|27376927|ref|NP_768456.1| RhcN protein [Bradyrhizobium japonicum USDA 110]
 gi|12620523|gb|AAG60799.1|AF322012_104 RhcN [Bradyrhizobium japonicum]
 gi|27350069|dbj|BAC47081.1| RhcN protein [Bradyrhizobium japonicum USDA 110]
          Length = 451

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/373 (40%), Positives = 221/373 (59%), Gaps = 7/373 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +VI +  D V + P+G    +S    V   GR + ++      GRVI++ G+P+DG   +
Sbjct: 75  EVIGLLPDGVLLTPIGDMVGLSNRAEVVTTGRMQEVAAGPDLLGRVIDSFGRPLDGKGPI 134

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+ +  +  + P  M R+ +E+ F  G+RV+D       GQRIG++  +G GKSTL+S
Sbjct: 135 KAGE-ARPLRGRAPNPMKRRAIEQPFPLGVRVLDGLLTCGEGQRIGIYGDAGCGKSTLMS 193

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
              R    D  I++L+GERGREVREFIE +LG+ L +SVVVV TSD S + R      A 
Sbjct: 194 QIVRGAAADVTIVALIGERGREVREFIERHLGEALHRSVVVVETSDRSAMERAQCAHMAT 253

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +G  V+L++DS+TRF+ ++REI   +GE P  RG+P SVF+ LP LLER G 
Sbjct: 254 ALAEYFRDQGLRVVLMMDSLTRFSRAMREIGLAAGEPPTRRGFPPSVFALLPGLLERAGM 313

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
              E G+ITA  +VLV+GD   DPIA+  R ILDGHI+L+R+LA    +P +D L+S SR
Sbjct: 314 G--EHGSITAFYTVLVEGDGTGDPIAEESRGILDGHIILSRALASREHFPAIDVLSSRSR 371

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           + D   S   +K  S    L+ R+ E   +  +G Y+ G D + D+A+  +  +  FL+Q
Sbjct: 372 VMDAIVSVPHRKAASFFRDLLSRYAEAEFLIKVGEYKQGSDPLTDRAIASIEQLRAFLRQ 431

Query: 420 SPSDLSSEDVFQE 432
              +  S   F+E
Sbjct: 432 GQGEACS---FEE 441


>gi|115360594|ref|YP_777731.1| type III secretion system ATPase [Burkholderia ambifaria AMMD]
 gi|115285922|gb|ABI91397.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria AMMD]
          Length = 463

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/368 (42%), Positives = 223/368 (60%), Gaps = 10/368 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117
           +V+  + D+  + P G    +S    V    R    RI P     GRVI++LG+PIDG  
Sbjct: 85  EVVGFSRDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L + D    +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL
Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + MFAR    D  +I+L+GERGREVREF E  LG D + +SVVV ATSD S I R  A  
Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAY 261

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER
Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G+ITA+ +VL + +   DPIA+ VR ILDGH++L+R +A + RYP +D L S
Sbjct: 322 AGRSAL--GSITALYTVLAEDETGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +  S +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I DF
Sbjct: 380 LSRVMTQVVSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRDF 439

Query: 417 LKQSPSDL 424
           L Q P+DL
Sbjct: 440 LGQ-PTDL 446


>gi|113969628|ref|YP_733421.1| flagellum-specific ATP synthase [Shewanella sp. MR-4]
 gi|114046858|ref|YP_737408.1| flagellum-specific ATP synthase [Shewanella sp. MR-7]
 gi|113884312|gb|ABI38364.1| flagellar protein export ATPase FliI [Shewanella sp. MR-4]
 gi|113888300|gb|ABI42351.1| flagellar protein export ATPase FliI [Shewanella sp. MR-7]
          Length = 445

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +V+  + +++Y+ P+     +  G  V   G +  +S      GRV++  G P+DG  
Sbjct: 61  IAEVVGFDDELLYLMPIEELRGVLPGARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L     +    + + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 ALSTEQQAPRHSNAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS
Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    S +  + +  +      +++ +D+  IG Y  G D  +D A+   P +  F
Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419

Query: 417 LKQSPSD 423
           L+Q+  D
Sbjct: 420 LRQTMRD 426


>gi|29839803|ref|NP_828909.1| type III secretion system ATPase [Chlamydophila caviae GPIC]
 gi|29834150|gb|AAP04787.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila caviae
           GPIC]
          Length = 442

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/386 (40%), Positives = 232/386 (60%), Gaps = 16/386 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDTEL-- 118

Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            KG L     +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GK
Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177

Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           S+LL M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR 
Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPR
Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPR 297

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G S  +KG ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D
Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAID 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  
Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FLKQ   D+  +  ++E  ++L+
Sbjct: 416 LNRFLKQ---DIHEKTNYEEAAQQLR 438


>gi|117919793|ref|YP_868985.1| flagellum-specific ATP synthase [Shewanella sp. ANA-3]
 gi|117612125|gb|ABK47579.1| flagellar protein export ATPase FliI [Shewanella sp. ANA-3]
          Length = 445

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +V+  + +++Y+ P+     +  G  V   G +  +S      GRV++  G P+DG  
Sbjct: 61  IAEVVGFDDELLYLMPIEELRGVLPGARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L     +    + + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 ALSTEQQAPRHSNAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS
Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    S +  + +  +      +++ +D+  IG Y  G D  +D A+   P +  F
Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419

Query: 417 LKQSPSD 423
           L+Q+  D
Sbjct: 420 LRQTMRD 426


>gi|58582227|ref|YP_201243.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624120|ref|YP_451492.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188576787|ref|YP_001913716.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188576979|ref|YP_001913908.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58426821|gb|AAW75858.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368060|dbj|BAE69218.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521239|gb|ACD59184.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521431|gb|ACD59376.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 458

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 210/342 (61%), Gaps = 15/342 (4%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD  W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            G D   D+A+ + P I +FL Q   D+    V  +    LQ
Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ---DVHKASVLSDSLSALQ 451


>gi|171057706|ref|YP_001790055.1| flagellar protein export ATPase FliI [Leptothrix cholodnii SP-6]
 gi|170775151|gb|ACB33290.1| flagellar protein export ATPase FliI [Leptothrix cholodnii SP-6]
          Length = 466

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 143/319 (44%), Positives = 201/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G+P+D    L   D+  + +++ P  AM+R  V     TG+R I+    +  G
Sbjct: 128 GRVVDANGEPMDRLGPLQ--DVHPQPLARRPINAMDRDPVRTPLDTGVRSINALLTVGRG 185

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVV 220
           QR+G+FAG+G+GKS LL M AR    D +++ L+GERGREV+EFIED LG+  + +SVVV
Sbjct: 186 QRLGLFAGTGVGKSVLLGMMARYTEADVIVVGLIGERGREVKEFIEDILGEEGRARSVVV 245

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAEYF  +G +VLL++DS+TRFA + REIA   GE P  +
Sbjct: 246 AAPADSPPLTRMQGATYATAIAEYFRDQGRHVLLLMDSLTRFAMAQREIALAIGEPPATK 305

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP S F++LP+L+ER G  +K +G+ITA  +VL +GD+  DPIAD+ R ILDGHIVL+R
Sbjct: 306 GYPPSCFAKLPQLVERSGNGQKGQGSITAFYTVLSEGDDQQDPIADAARGILDGHIVLSR 365

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   S+SR+     + +  +    +  L+ R  + RD+  +G Y PG D
Sbjct: 366 ELAESGHYPAIDIEKSISRVMTSVAAREHIEAARRMRQLLSRVNKARDLIQLGAYAPGHD 425

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD AV   P I   L+Q
Sbjct: 426 AELDAAVRAQPAIVALLQQ 444


>gi|212634370|ref|YP_002310895.1| flagellum-specific ATP synthase [Shewanella piezotolerans WP3]
 gi|212555854|gb|ACJ28308.1| ATPase FliI/YscN [Shewanella piezotolerans WP3]
          Length = 446

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 163/427 (38%), Positives = 250/427 (58%), Gaps = 22/427 (5%)

Query: 9   AQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           ++LA+ +SK N  V       +  V  T+        +G     +  + + + +VI  + 
Sbjct: 10  SKLAQHHSKVNPFVAEASGQLVRVVGLTLEATGCRASVGSLCSIETMSGELVAEVIGFDD 69

Query: 68  DIVYICPVGIGEEIS---LGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++Y+ P+   EE+S    G  V   G+   +S      GRV++  G PIDG   LG   
Sbjct: 70  ELLYLMPI---EELSGVLPGAKVTPLGQQSGLSVGLALLGRVLDGSGLPIDG---LG--- 120

Query: 124 LSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +++   K P   PA+N   R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 -NLQTDQKAPTHAPAINPLARRAISEPLDVGVRAINSMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER
Sbjct: 240 TSTRIAEYFRDMGYSVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G    ++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS
Sbjct: 300 AGNGGGKQGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    + +  + +  +  +   +++ +D+  IG Y  G D  +D A+   P +  F
Sbjct: 360 ISRVAPMVITTEHLEAMRRVKQVYSLYQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAF 419

Query: 417 LKQSPSD 423
           L+Q+  D
Sbjct: 420 LRQTMKD 426


>gi|148546740|ref|YP_001266842.1| flagellum-specific ATP synthase [Pseudomonas putida F1]
 gi|148510798|gb|ABQ77658.1| flagellar protein export ATPase FliI [Pseudomonas putida F1]
          Length = 451

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           V++ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   + K +  +
Sbjct: 77  VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER G  E   G
Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            AD  +       L  R  ++RD+  +G Y  G D   D A+     + +FL+Q 
Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428


>gi|2935537|gb|AAC38612.1| BscN [Bordetella bronchiseptica]
          Length = 444

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/410 (38%), Positives = 235/410 (57%), Gaps = 16/410 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
            L ++G  +  + ++   V  + +   VCL   + + G++ +  G+V+    D   + P+
Sbjct: 20  TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130
           G    IS    V   GR  + P      GRV++ LG+P+D  +S   G L       + +
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAES---GPLHAHKFYPVFA 133

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  
Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +++L+GERGREVREF+E  LG +  +KSV+V ATSD+S + R  A   A  IAEYF  +G
Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL  +DS+TRFA + REI   +G+ P  RGYP SVF+ LP+L+ER G ++   G+ITA
Sbjct: 254 QRVLFRMDSVTRFARAQREIGLAAGDPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   
Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           K L   +  L+ ++++   +  IG Y+ G D   D+A+ ++  I  FL+Q
Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQ 421


>gi|312881284|ref|ZP_07741082.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309371176|gb|EFP98630.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 439

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 159/365 (43%), Positives = 226/365 (61%), Gaps = 23/365 (6%)

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           PVG G  + +GD +               G+V++ LG+ ++G    G+     +   + P
Sbjct: 91  PVGHGHRVMVGDELL--------------GKVVDGLGQSMEGVRWHGEWK---DNQGEAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ + +  +TG+R ID    +  GQRIG+FA +G GKSTLL M A     D V+++
Sbjct: 134 DPLKRKLITQVMRTGVRAIDSTLTIGIGQRIGIFAAAGGGKSTLLGMLAGHCDADVVVLA 193

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           LVGERGREVREFIE  L  +++ K V+VVATSD+ P+ R  A +TA TIAEYF  KG NV
Sbjct: 194 LVGERGREVREFIEYCLPPSVREKMVLVVATSDKPPLERFKAAMTATTIAEYFRDKGQNV 253

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REI   +GE PVA G+P SVF +L  LLER GP+    G+ITA+ +
Sbjct: 254 LLMVDSLTRFARAGREIGLAAGEPPVANGFPPSVFVQLASLLERAGPASV--GSITAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GDN N+P+AD VRSILDGH+VL+R LA  G YP +D  ASVSR+ D+  +   K  
Sbjct: 312 VLVEGDNINEPVADEVRSILDGHVVLSRKLAGSGHYPAIDVNASVSRVMDQIVTGQHKAN 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            + L HL+  ++E + +  +G Y+ G D   D+AV +   I  FL Q   D   +  F++
Sbjct: 372 ANHLRHLLALYQEVQLLIRVGEYQVGQDSETDEAVDKYKQIERFLCQ---DTHEQTDFEQ 428

Query: 433 ITKKL 437
           + ++L
Sbjct: 429 VLEQL 433


>gi|22127336|ref|NP_670759.1| flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45442788|ref|NP_994327.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108809063|ref|YP_652979.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua]
 gi|108810740|ref|YP_646507.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|150260257|ref|ZP_01916985.1| lateral flagellar assembly ATPase [Yersinia pestis CA88-4125]
 gi|165925142|ref|ZP_02220974.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939070|ref|ZP_02227622.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166008909|ref|ZP_02229807.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166211962|ref|ZP_02237997.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167398591|ref|ZP_02304115.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167419081|ref|ZP_02310834.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425097|ref|ZP_02316850.1| flagellum-specific ATP synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167466349|ref|ZP_02331053.1| flagellum-specific ATP synthase [Yersinia pestis FV-1]
 gi|218927904|ref|YP_002345779.1| flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|229837400|ref|ZP_04457563.1| lateral flagellar assembly ATPase [Yersinia pestis Pestoides A]
 gi|229840613|ref|ZP_04460772.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842836|ref|ZP_04462988.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900937|ref|ZP_04516061.1| lateral flagellar assembly ATPase [Yersinia pestis Nepal516]
 gi|270487681|ref|ZP_06204755.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294502781|ref|YP_003566843.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|21960418|gb|AAM87010.1|AE013949_4 flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45437654|gb|AAS63204.1| putative flagellum-specific ATP synthase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774388|gb|ABG16907.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|108780976|gb|ABG15034.1| putative flagellum-specific ATP synthase [Yersinia pestis Antiqua]
 gi|115346515|emb|CAL19391.1| putative flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|149289665|gb|EDM39742.1| lateral flagellar assembly ATPase [Yersinia pestis CA88-4125]
 gi|165913026|gb|EDR31651.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165923342|gb|EDR40493.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992248|gb|EDR44549.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206708|gb|EDR51188.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166963075|gb|EDR59096.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051095|gb|EDR62503.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167055860|gb|EDR65641.1| flagellum-specific ATP synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229682276|gb|EEO78368.1| lateral flagellar assembly ATPase [Yersinia pestis Nepal516]
 gi|229690103|gb|EEO82160.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696979|gb|EEO87026.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705523|gb|EEO91533.1| lateral flagellar assembly ATPase [Yersinia pestis Pestoides A]
 gi|262360813|gb|ACY57534.1| flagellum-specific ATP synthase [Yersinia pestis D106004]
 gi|262364758|gb|ACY61315.1| flagellum-specific ATP synthase [Yersinia pestis D182038]
 gi|270336185|gb|EFA46962.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294353240|gb|ADE63581.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|320016719|gb|ADW00291.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 446

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 208/363 (57%), Gaps = 8/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + DI Y+ P      +  G  VF     G   I  S  W GRVIN LG+P+DG  
Sbjct: 60  QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPLDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG      + + ++ P + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS L
Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE  L    + KSVVV A +DESP++R  A  
Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 237 LCHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G +TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S
Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR   +   + + K  S L      +   + +  +GGY  G D + D+AVH  P I  F
Sbjct: 356 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415

Query: 417 LKQ 419
           L+Q
Sbjct: 416 LRQ 418


>gi|161378124|ref|NP_746480.2| flagellum-specific ATP synthase [Pseudomonas putida KT2440]
          Length = 451

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           V++ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   + K +  +
Sbjct: 77  VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER G  E   G
Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            AD  +       L  R  ++RD+  +G Y  G D   D A+     + +FL+Q 
Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428


>gi|18140083|gb|AAL60251.1|AF459637_1 putative EscN [Escherichia coli]
          Length = 446

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/372 (40%), Positives = 218/372 (58%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P++
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ ++  F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNIAAPYLPFERSLYAEPPDPLLRQVIDPPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPGLERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERSGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  ++    +  IG Y  G D   DKA+    +I 
Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421

Query: 415 DFLKQSPSDLSS 426
           +F++QS  D+SS
Sbjct: 422 NFIQQSTKDISS 433


>gi|331671790|ref|ZP_08372586.1| flagellar protein export ATPase FliI [Escherichia coli TA280]
 gi|331070779|gb|EGI42138.1| flagellar protein export ATPase FliI [Escherichia coli TA280]
          Length = 445

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 151/373 (40%), Positives = 219/373 (58%), Gaps = 4/373 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              DL   +   V   + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL 
Sbjct: 120 NGNDLLPPLPPLVN-PLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLG 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A    
Sbjct: 179 MITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELC 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G
Sbjct: 239 HSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+S
Sbjct: 299 NSES-SGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSIS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R  ++  S + ++   +L      + E + +  +GGY  G D  +DKAV   P I  FL+
Sbjct: 358 RCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLR 417

Query: 419 QSPSDLSSEDVFQ 431
           Q   + +S ++ Q
Sbjct: 418 QEMREPASLELVQ 430


>gi|166712029|ref|ZP_02243236.1| flagellar protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 458

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 147/342 (42%), Positives = 210/342 (61%), Gaps = 15/342 (4%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD  W    +K    L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTWRLRIRK----LKRLLSAYTANRDLIAIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            G D   D+A+ + P I +FL Q   D+    V  +    LQ
Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ---DVHKASVLSDSLSALQ 451


>gi|239909143|ref|YP_002955885.1| flagellum-specific ATP synthase [Desulfovibrio magneticus RS-1]
 gi|239799010|dbj|BAH77999.1| flagellum-specific ATP synthase [Desulfovibrio magneticus RS-1]
          Length = 441

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 151/335 (45%), Positives = 211/335 (62%), Gaps = 5/335 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRVI+A G PID  D +     +  I +  P  M+R R+      G+R I+    L  
Sbjct: 103 YLGRVIDAFGNPIDNGDPVVPRRFN-PIFAPAPSPMDRPRICDPMDVGVRAINGCLTLGK 161

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+ AGSG+GKSTL+ M AR+   D  +I LVGERGRE+REFIE  LG + + +SVV
Sbjct: 162 GQRVGIMAGSGVGKSTLMGMIARNTVADVNVIGLVGERGRELREFIEKDLGPEGMARSVV 221

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+SP++R  A   A  +AE+F  +G++V+L++DS+TRFA + RE+   +GE P  
Sbjct: 222 VVATSDQSPLIRMRAAYAATAMAEFFRDEGNDVILMMDSVTRFAMAGREVGLAAGEPPTT 281

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGY  SVF++LP+LLER G      G+IT + +VLVDGD+ N+PIADSVRSILDGHIVL 
Sbjct: 282 RGYTPSVFAQLPKLLERAG--RNGLGSITGIYTVLVDGDDFNEPIADSVRSILDGHIVLT 339

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA++G +P +D L S+SRL       D       L  L+  +    D+  IG Y  G 
Sbjct: 340 RDLADQGHFPAIDVLRSISRLRSDVTPKDALAASRELIRLLATYRRVEDMVNIGAYARGA 399

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +  +D+A+  +  I  FL+Q  ++  S E+ FQ +
Sbjct: 400 NPEIDRAIDMIGPINTFLRQDVAERQSLEECFQAV 434


>gi|167034922|ref|YP_001670153.1| flagellum-specific ATP synthase [Pseudomonas putida GB-1]
 gi|166861410|gb|ABY99817.1| flagellar protein export ATPase FliI [Pseudomonas putida GB-1]
          Length = 451

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           V++ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   + K +  +
Sbjct: 77  VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER G  E   G
Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            AD  +       L  R  ++RD+  +G Y  G D   D A+     + +FL+Q 
Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428


>gi|153948482|ref|YP_001399626.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|152959977|gb|ABS47438.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           31758]
          Length = 446

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/363 (41%), Positives = 208/363 (57%), Gaps = 8/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + DI Y+ P      +  G  VF     G   I  S  W GRVIN LG+PIDG  
Sbjct: 60  QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPIDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG      + + ++ P + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS L
Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE  L    + KSVVV A +DESP++R  A  
Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              +IA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 237 LCHSIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G +TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S
Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR   +     + K  S L      +   + +  +GGY  G D + D+AVH  P I  F
Sbjct: 356 ISRCMSQVIGRQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415

Query: 417 LKQ 419
           L+Q
Sbjct: 416 LRQ 418


>gi|289629030|ref|ZP_06461984.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
          Length = 347

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 141/325 (43%), Positives = 200/325 (61%), Gaps = 2/325 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P+DG   +   D        + P + R  + +    GIR I+    +  GQ
Sbjct: 6   GRVLDGAGRPLDGRSPIKAEDWVPMDGPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQ 64

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAG+G+GKS LL M  R    D +++ L+GERGREV+EFIE  LG+  LK+SVVV 
Sbjct: 65  RLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVA 124

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           + +D++P++R  A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +G
Sbjct: 125 SPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKG 184

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP+L+ER G +E   G+ITA  +VL +GD+  DPIADS R +LDGHI+L+R 
Sbjct: 185 YPPSVFARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHILLSRR 244

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAEEG YP +D  AS+SR+     S +          L  R+++TRD+  +G Y  G D 
Sbjct: 245 LAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDR 304

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
             D A+   P++  + +Q   D  S
Sbjct: 305 ETDMAIALHPVLVRYQRQGLRDNES 329


>gi|253702505|ref|YP_003023694.1| ATPase, FliI/YscN family [Geobacter sp. M21]
 gi|251777355|gb|ACT19936.1| ATPase, FliI/YscN family [Geobacter sp. M21]
          Length = 434

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/391 (39%), Positives = 225/391 (57%), Gaps = 8/391 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINA 108
           VH   ++    +V+    +   + P+G    + LG ++     +  +       GRVI+ 
Sbjct: 46  VHSEGHAPIPAEVVGFRENKTLLMPLGELRGVGLGSVISVRREKAALGVGPALLGRVIDG 105

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PID    +   D        V P M R+ + K    GIR I+       GQR+G+ A
Sbjct: 106 LGQPIDDKGPIEVADEYPIYALPVNP-MKRRPIRKPLNLGIRAINGLLTCGEGQRVGIMA 164

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDES 227
           GSG+GKSTLL M AR    D  +I+L+GERGRE+REFIE D   + L+KSVVVVATSD+ 
Sbjct: 165 GSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQKEGLRKSVVVVATSDQP 224

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R      A TIAEYF ++G  VLL++DS TRFA ++RE+    GE P  +GY  SVF
Sbjct: 225 PLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVF 284

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRLLER G    + G+IT + +VLV+GD+ N+PI+D++RSILDGHI+L R LA    
Sbjct: 285 AALPRLLERTG--NFQGGSITGLYTVLVEGDDFNEPISDAMRSILDGHIILTRELAARNI 342

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YPP+D + S SR+     + + + L      L+  + +  D+  IG Y+ G +  +D AV
Sbjct: 343 YPPIDLMNSASRVMSDVATKEHRALAGRFKELLATYRQAEDMINIGAYKSGSNPKIDYAV 402

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            ++  +  +LKQ   D+  E  F+E    L+
Sbjct: 403 AKMEQMIGYLKQ---DVGDEVNFEESIAALE 430


>gi|77165819|ref|YP_344344.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrosococcus oceani ATCC 19707]
 gi|254434391|ref|ZP_05047899.1| flagellar protein export ATPase FliI [Nitrosococcus oceani AFC27]
 gi|76884133|gb|ABA58814.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrosococcus oceani ATCC 19707]
 gi|207090724|gb|EDZ67995.1| flagellar protein export ATPase FliI [Nitrosococcus oceani AFC27]
          Length = 480

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 145/352 (41%), Positives = 211/352 (59%), Gaps = 9/352 (2%)

Query: 89  HWGRFRISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           H GR  +       GRV++  G+P+D    L     +S+E     P  + RQ + +    
Sbjct: 105 HGGRMAVG--EALLGRVLDGGGRPLDDLGPLRATHRVSLEGQPINP--LARQPIREPMDV 160

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+  I+    +  GQR+G+FAGSG+GKS LL M  R    D +++ L+GERGREV+EFIE
Sbjct: 161 GVAAINALLTIGRGQRMGLFAGSGVGKSVLLGMMTRYAKADVIVVGLIGERGREVQEFIE 220

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           + LG + L +SVVV   +D SP++R    + A +IAEYF  +G  VLL++DS+TRF H+ 
Sbjct: 221 NILGKEGLARSVVVATPADHSPLMRIHGAMLATSIAEYFRDQGKQVLLLMDSLTRFGHAQ 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE+A   GE P  RGYP SVF+++P+LLER G      G+ITA  +VL +GD+ NDP+AD
Sbjct: 281 RELALAIGEPPATRGYPPSVFAKIPQLLERAGNGRSGSGSITAFYTVLTEGDDPNDPVAD 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           S R+ILDGHIVL+R LAE G YP +D  AS+SR+  +    + ++       +   + + 
Sbjct: 341 SARAILDGHIVLSRRLAEAGHYPAIDIEASISRVMSQITVPEHQQAAQQFKQIYSLYSQN 400

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +D+  +G Y  G D  LD+AV + P    FL+Q   D+S     +E  ++LQ
Sbjct: 401 QDLISVGAYSRGSDSRLDEAVDRQPQFRSFLQQ---DMSQSFSVKESLERLQ 449


>gi|313497799|gb|ADR59165.1| FliI [Pseudomonas putida BIRD-1]
          Length = 451

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           V++ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   + K +  +
Sbjct: 77  VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER G  E   G
Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            AD  +       L  R  ++RD+  +G Y  G D   D A+     + +FL+Q 
Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428


>gi|167840292|ref|ZP_02466976.1| type III secretion system ATPase [Burkholderia thailandensis
           MSMB43]
          Length = 442

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 156/370 (42%), Positives = 220/370 (59%), Gaps = 5/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 65  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGHGILGRVIDSFGEPIDGRGEL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 125 DY-DALRPVIAPPPNPMSRRMVDAPLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 184 MFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G
Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+S
Sbjct: 304 MG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL 
Sbjct: 362 RIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRTFLN 421

Query: 419 QSPSDLSSED 428
           Q   + S  D
Sbjct: 422 QRTDEYSPPD 431


>gi|328958281|ref|YP_004375667.1| flagellum-specific ATP synthase [Carnobacterium sp. 17-4]
 gi|328674605|gb|AEB30651.1| flagellum-specific ATP synthase [Carnobacterium sp. 17-4]
          Length = 442

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 168/426 (39%), Positives = 243/426 (57%), Gaps = 13/426 (3%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICP 74
           K+  ++ G +S +T +   V  L  +V  G+      K+S    L +V+    ++V + P
Sbjct: 16  KDYYLKMGKVSQVTGLIIKVEGLDAFV--GEVCEIHIKSSGRIALSEVVGFVDEMVLLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E I  G LV   G+  ++  S    G  ++ LG+P+D   SL    +  ++    P
Sbjct: 74  LDELEGIGPGCLVKPTGKTLKVEISEKLLGNTLDGLGRPMD--TSLEVDGVFYDVNRSSP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               R++++    TGI+ ID    +  GQR+G+FAGSG+GKSTLL M AR    D ++I 
Sbjct: 132 NPFKRKKIKDVMPTGIKAIDGTLTVGEGQRVGIFAGSGVGKSTLLGMMARYIEADVIVIG 191

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EFIE  LG+   +KSVVV ATSD  P++R      A TIAEYF  +G  V
Sbjct: 192 LIGERGREVLEFIEKDLGEEGYRKSVVVCATSDMPPLVRLKGASVATTIAEYFRDQGKKV 251

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           +L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G SE   G+ITA  +
Sbjct: 252 VLMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFTTLPKLLERSGMSEN--GSITAFYT 309

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+PIADSVR ILDGHIVL+R +A E  YP +D   S+SRL     +      
Sbjct: 310 VLVEGDDMNEPIADSVRGILDGHIVLSRKIASENHYPAIDIQNSISRLMKDITTDKHSTT 369

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              L   +  + +++D+  +G YR G +  +D+AV     I DFLKQ    +     F E
Sbjct: 370 AGKLKENMSVYSDSKDLIDVGAYRKGSNPSVDRAVQLNTPIKDFLKQR---VDERYAFDE 426

Query: 433 ITKKLQ 438
           +  +L+
Sbjct: 427 VVDQLK 432


>gi|204927532|ref|ZP_03218733.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204322874|gb|EDZ08070.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 433

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|56413614|ref|YP_150689.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362538|ref|YP_002142175.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56127871|gb|AAV77377.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094015|emb|CAR59511.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 433

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDAYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|16764765|ref|NP_460380.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161614168|ref|YP_001588133.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167995049|ref|ZP_02576139.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|194442812|ref|YP_002040667.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|3024659|sp|P74857|SSAN_SALTY RecName: Full=Probable secretion system apparatus ATP synthase SsaN
 gi|1669750|emb|CAA70537.1| secretion system apparatus [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16419936|gb|AAL20339.1| secretion system apparatus protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161363532|gb|ABX67300.1| hypothetical protein SPAB_01910 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401475|gb|ACF61697.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|205327193|gb|EDZ13957.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261246621|emb|CBG24431.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993304|gb|ACY88189.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157950|emb|CBW17445.1| type III secretion ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912400|dbj|BAJ36374.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224039|gb|EFX49102.1| Type III secretion cytoplasmic ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323129687|gb|ADX17117.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332988302|gb|AEF07285.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 433

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|260438805|ref|ZP_05792621.1| flagellar protein export ATPase FliI [Butyrivibrio crossotus DSM
           2876]
 gi|292808794|gb|EFF67999.1| flagellar protein export ATPase FliI [Butyrivibrio crossotus DSM
           2876]
          Length = 434

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 146/321 (45%), Positives = 210/321 (65%), Gaps = 5/321 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             G+ ++ LG P DG +        +E     P  M+R  + +    G++ +D    +  
Sbjct: 99  LLGKTVDGLGVPTDGSELQSFERYPVE--QTAPDPMDRVIINEILPLGVKAVDGLLTIGK 156

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQRIG+FAGSG+GKSTLL MFAR+   D  +I+L+GERGREVREFIE  LG+  +K+SVV
Sbjct: 157 GQRIGIFAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFIERDLGEEGMKRSVV 216

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+  ++R  A  TA  IAEYF  +G +VLL++DS+TRF+ + REI   SGE PV 
Sbjct: 217 VVATSDKPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVT 276

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP S++SE+P+LLER G S  +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+
Sbjct: 277 RGYPPSMYSEMPKLLERAGNS--DKGSITGLYTVLVDGDDFNEPITDTARSILDGHIMLS 334

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA +  YP +D L S+SR   +     +K+L   L +++  + E  D+  IG Y+ G 
Sbjct: 335 RKLAHKNHYPAIDVLQSISRCMSQIVDKHQKELAGRLKNVMATYTEAEDLINIGAYKSGS 394

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +  +D A+ ++  + +FL Q+
Sbjct: 395 NKNIDYAISKIDKVNEFLMQA 415


>gi|2105151|gb|AAB57902.1| FliI [Treponema denticola]
          Length = 473

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 160/383 (41%), Positives = 226/383 (59%), Gaps = 6/383 (1%)

Query: 55  NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113
           N D L  +V+ +N  IV +      + + +G L+    +F       + G  ++AL K  
Sbjct: 52  NPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGTLLLQAEKFYRPGWKYFTGPCVDALCKSA 111

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG            +++  P AM R+ + +   TGIR ID    +  GQR+G+FAG+GIG
Sbjct: 112 DGKPEPYSAK-RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIG 170

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           KSTLL M AR+   D  +I+L+GERGREV +FIE  LG + LK SV+V ATSD   + R 
Sbjct: 171 KSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDRKCLARI 230

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
               TA  IAEYF  +G +V+L+ DS+TRFA + REI    GE P  RGY  SVFS LP+
Sbjct: 231 RGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPK 290

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G SEK  G+IT   +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V+
Sbjct: 291 LLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVN 348

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            L S+S +  ++     K     +  L+  + E+ D+  +G Y+ G    +D A+   P 
Sbjct: 349 VLKSISSIIQQSIGTKHKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPR 408

Query: 413 IYDFLKQSPSDLSS-EDVFQEIT 434
           IYDFL Q   D +  +D  Q+++
Sbjct: 409 IYDFLTQEVDDPAKLKDTLQKLS 431


>gi|163802005|ref|ZP_02195901.1| type III secretion system ATPase [Vibrio sp. AND4]
 gi|159174146|gb|EDP58954.1| type III secretion system ATPase [Vibrio sp. AND4]
          Length = 440

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 213/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  +  +      +   
Sbjct: 88  VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGTQN-SEPTAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + KSV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I +FL+Q    PS+L
Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIREFLRQGTHEPSEL 427


>gi|332284039|ref|YP_004415950.1| flagellum-specific ATP synthase FliI [Pusillimonas sp. T7-7]
 gi|330427992|gb|AEC19326.1| flagellum-specific ATP synthase FliI [Pusillimonas sp. T7-7]
          Length = 496

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 206/322 (63%), Gaps = 6/322 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P+DG  +L     +      + P + R  ++     G+R I+    +  GQ
Sbjct: 139 GRVLDGAGQPLDGLGALDNVRPAPLFAQTINP-LARAPIDTVLDVGVRAINGLLTVGRGQ 197

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D ++++L+GERGREV+EFIE  LG + L++SVVV 
Sbjct: 198 RMGLFAGSGVGKSVLLGMMARYTRADVIVVALIGERGREVKEFIEHNLGAEGLQRSVVVA 257

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR    + A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 258 APADVSPLLRLQGAVYATRLAEHFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATKG 317

Query: 282 YPTSVFSELPRLLERIGP----SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
           YP SVF++LP L+ER G     + +  G+ITA  +VL +GD+  DPIADS R+ILDGH+V
Sbjct: 318 YPPSVFAKLPALVERAGNGAPVAGRPAGSITAFYTVLTEGDDQQDPIADSARAILDGHVV 377

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+RSLAE G YP +D  AS+SR+       D+ KLV     ++ R++   D+  +G Y P
Sbjct: 378 LSRSLAESGHYPAIDIEASISRVMSAIVPGDQFKLVHRFKQMLSRYQRNHDLIAVGAYTP 437

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
           G D  +D+A+ + P +  +L+Q
Sbjct: 438 GNDPQIDEAIEKHPWLEAYLQQ 459


>gi|24986088|gb|AAN69944.1|AE016633_2 flagellum-specific ATP synthase FliI [Pseudomonas putida KT2440]
          Length = 457

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           V++ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   + K +  +
Sbjct: 83  VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 139

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 140 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 199

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 200 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 259

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER G  E   G
Sbjct: 260 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 319

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 320 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 379

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            AD  +       L  R  ++RD+  +G Y  G D   D A+     + +FL+Q 
Sbjct: 380 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 434


>gi|306813317|ref|ZP_07447510.1| FliI/YscN family ATPase [Escherichia coli NC101]
 gi|305854080|gb|EFM54519.1| FliI/YscN family ATPase [Escherichia coli NC101]
          Length = 446

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 150/376 (39%), Positives = 221/376 (58%), Gaps = 10/376 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W G V+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGCVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA +DESP++R  A 
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GY  S F  +P+L+E
Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYLPSAFGMIPKLVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   
Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR  ++  S + ++   ++      + E + +  +GGY  G D  +DKAV   P I  
Sbjct: 355 SISRCMNQVTSPEHQQSARAMKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414

Query: 416 FLKQSPSDLSSEDVFQ 431
           FL+Q   + +S ++ Q
Sbjct: 415 FLRQEMHEPASLELVQ 430


>gi|46398256|gb|AAS91810.1| AscN [Aeromonas hydrophila]
          Length = 440

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 158/408 (38%), Positives = 232/408 (56%), Gaps = 20/408 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV G  I  +  +      LS    +  F  HQ   +  LG++  I+ +   + P G   
Sbjct: 39  VVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTP-LGEMFGISSN-TEVSPTGTMH 96

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ +G+ +               G+V++ LG P  G   L +      +    PP M+R+
Sbjct: 97  QVGVGEHLL--------------GQVLDGLGNPFGGGH-LPEPAAWYPVYRDAPPPMSRK 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +    GIR ID       GQR+G+FA +G GKSTLL+   RS   D  +++L+GERG
Sbjct: 142 RITQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 201

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFIE  LG+  LKK+V+VVATSD   + R  A   A +IAEYF  +G  VLL++DS
Sbjct: 202 REVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S  +KG+ITA+ +VLV+GD
Sbjct: 262 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    + +     +  
Sbjct: 320 DMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRIRS 379

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            + ++EE   +  IG Y+ G D + D+A+ ++  I  +L+Q   + SS
Sbjct: 380 WLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLRQGTHEPSS 427


>gi|332163582|ref|YP_004424924.1| type III secretion system ATPase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667812|gb|ADZ44455.1| type III secretion system ATPase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 410

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID       GQ
Sbjct: 76  GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 134

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           R+G+FA +G GKSTLL+   RS   D  +++L+GERGREVREFIE  LG+  L+K+V+VV
Sbjct: 135 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 194

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 195 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 254

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LPRL+ER G S K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R 
Sbjct: 255 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 312

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG Y+ G D 
Sbjct: 313 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 372

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425
             D+A+ ++  I  +L Q   +LS
Sbjct: 373 EADQAIERIGAIRGWLCQGTHELS 396


>gi|134300244|ref|YP_001113740.1| flagellar protein export ATPase FliI [Desulfotomaculum reducens
           MI-1]
 gi|134052944|gb|ABO50915.1| type III secretion system ATPase, FliI/YscN [Desulfotomaculum
           reducens MI-1]
          Length = 442

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 220/380 (57%), Gaps = 5/380 (1%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +V QG+      +V+        + P+G    I  G  V   G    I       G+V++
Sbjct: 51  IVAQGEPEPVRAEVVGFRDQFSLLMPLGELRGIYPGCAVIPSGHNLTIKVGKHLQGKVLD 110

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PID       G     + +K P  + R+R++    TG+R +D       GQRIG+F
Sbjct: 111 GLGRPIDKTVDYASGQ-EFLVDNKPPNPLKRKRIDSVLPTGVRAVDALLTCGKGQRIGIF 169

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKSTLL M AR    D  +I+L+GERGREV EF+E+ LG   + +SV+V ATSD+
Sbjct: 170 AGSGVGKSTLLGMIARHGSADVNVIALIGERGREVLEFLEEDLGPQGMARSVIVAATSDQ 229

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             ++R      A  IAEYF  +G +V+L++DS+TRFA + RE+    GE P  +GY  SV
Sbjct: 230 PALVRLKGAFVATAIAEYFRDQGLDVMLMMDSVTRFAMAQREVGLAVGEPPATKGYTPSV 289

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LP+LLER G  ++  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL R LA   
Sbjct: 290 FALLPKLLERSGMGQQ--GSITAFYTVLVDGDDLNEPIADAVRGILDGHIVLTRKLASAN 347

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L SVSRL     S   K    +L  L+  ++E+ D+  IG Y  G +  +D A
Sbjct: 348 HYPAIDVLQSVSRLMPDIASDQHKNQAGNLRDLLATYQESEDLINIGAYVLGSNPKIDHA 407

Query: 407 VHQVPIIYDFLKQSPSDLSS 426
           + +   I  +L+QSP + SS
Sbjct: 408 ISKHDEIIGYLRQSPLEYSS 427


>gi|167588175|ref|ZP_02380563.1| ATPase FliI/YscN [Burkholderia ubonensis Bu]
          Length = 407

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 198/320 (61%), Gaps = 4/320 (1%)

Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV++A G+P+D    L  K D  +   S  P  ++R+ +      G+R I+    +  
Sbjct: 67  LGRVVDASGRPLDNLGPLTSKVDAPLSAASINP--LDREPIHHVLDVGVRAINALLTVGR 124

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVV
Sbjct: 125 GQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVV 184

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP+LR      A  +AE+F  +G +VLL++DS+TR+A + REIA   GE P  
Sbjct: 185 VAAPADVSPLLRMQGAAYATALAEWFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPAT 244

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+
Sbjct: 245 KGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLS 304

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LAE G YP +D  AS+SR             V     ++ R++  RD+  +G Y PG 
Sbjct: 305 RALAEAGHYPAIDIEASISRAMTALIDDTHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGR 364

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D  LD+A+   P I  FL+Q
Sbjct: 365 DAQLDRAIALYPHIEAFLQQ 384


>gi|300114780|ref|YP_003761355.1| flagellar protein export ATPase FliI [Nitrosococcus watsonii C-113]
 gi|299540717|gb|ADJ29034.1| flagellar protein export ATPase FliI [Nitrosococcus watsonii C-113]
          Length = 480

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/352 (41%), Positives = 211/352 (59%), Gaps = 9/352 (2%)

Query: 89  HWGRFRISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           H GR  +       GRV++  G+P+D    L     +S+E     P  + RQ + +    
Sbjct: 105 HGGRMAVG--EALLGRVLDGGGRPLDDLGPLRATHRVSLEGQPINP--LARQPIREPMDV 160

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+  I+    +  GQR+G+FAGSG+GKS LL M  R    D +++ L+GERGREV+EFIE
Sbjct: 161 GVAAINALLTIGRGQRMGLFAGSGVGKSVLLGMMTRYAKADVIVVGLIGERGREVQEFIE 220

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           + LG + L +SVVV   +D SP++R    + A +IAEYF  +G  VLL++DS+TRF H+ 
Sbjct: 221 NILGKEGLARSVVVATPADHSPLMRIHGAMLATSIAEYFRDQGKQVLLLMDSLTRFGHAQ 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE+A   GE P  RGYP SVF+++P+LLER G      G+ITA  +VL +GD+ NDP+AD
Sbjct: 281 RELALAIGEPPATRGYPPSVFAKIPQLLERAGNGRSGSGSITAFYTVLTEGDDPNDPVAD 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           S R+ILDGHIVL+R LAE G YP +D  AS+SR+  +    + ++       +   + + 
Sbjct: 341 SARAILDGHIVLSRRLAEAGHYPAIDIEASISRVMSQITVPEHQQAAQQFKQIYSLYSQN 400

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +D+  +G Y  G D  LD+AV + P    FL+Q   D+S     +E  ++LQ
Sbjct: 401 QDLISVGAYSRGSDSRLDEAVDKQPQFRSFLQQ---DMSRSFSVEESLERLQ 449


>gi|319787097|ref|YP_004146572.1| ATPase, FliI/YscN family [Pseudoxanthomonas suwonensis 11-1]
 gi|317465609|gb|ADV27341.1| ATPase, FliI/YscN family [Pseudoxanthomonas suwonensis 11-1]
          Length = 471

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 209/323 (64%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  ++  P  + R+ + +    G+R I+   P+  G
Sbjct: 129 GRVIDSDGVPLDGKGPVRAEGSVGMAGVAINP--LAREPIIQPLDVGVRAINALLPIGRG 186

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 187 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 246

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 247 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 306

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 307 GYPPSVFAKLPALVERAGNGAAGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 366

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD+ W    ++ + +L  L+  +   RD+  IG Y+
Sbjct: 367 RIADAGLYPAIDVESSVSRVVQDIADETW----RERIRALKRLVAAYNANRDLIAIGAYQ 422

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D ++D+A+ + P I +FL Q
Sbjct: 423 RGNDPVVDEALARWPEIMEFLGQ 445


>gi|317052370|ref|YP_004113486.1| ATPase, FliI/YscN family [Desulfurispirillum indicum S5]
 gi|316947454|gb|ADU66930.1| ATPase, FliI/YscN family [Desulfurispirillum indicum S5]
          Length = 439

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 152/370 (41%), Positives = 223/370 (60%), Gaps = 6/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D++ + P+G    I  G  V      F +       GRV+N LG PID +   
Sbjct: 60  EVVGFRDDVILLMPLGDLAGIGPGSRVEAMKEVFMVPVGDALVGRVLNGLGMPID-EQPE 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +      + +  P    R+R++    TG+R ID       GQR+G+FAGSG+GKSTLL 
Sbjct: 119 PECKRLYPVQAAPPNPFTRKRIDTPIGTGVRAIDGLLTWGKGQRVGIFAGSGVGKSTLLG 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M A++   D  +I+L+GERGREVREFIE  LG D L +SV+VVATSD+  ++R+     A
Sbjct: 179 MIAKNSQADINVIALIGERGREVREFIERDLGPDGLARSVIVVATSDQPALVRRQGAYVA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G NV+ ++DSITRF  + REI    GE P  +GY  SVF+ LP+L+ER G
Sbjct: 239 TAIAEYFRDQGKNVMFMMDSITRFCMAQREIGLAVGEPPTTKGYTPSVFALLPKLMERTG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E G+I+A+ +VLVDGD+  +P+AD+ RSILDGHI+L+R LA    +P +D L S S
Sbjct: 299 TGTGE-GSISALYTVLVDGDDITEPVADASRSILDGHIMLSRKLASRNHFPAIDVLGSAS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S + ++L + L +L+  + +  D+  IG Y  G +  +D+AV ++  I  FL+
Sbjct: 358 RVFGEITSGEHQELAAKLRNLMAVYGDAEDLINIGAYSKGTNKEIDRAVSRMGAINSFLR 417

Query: 419 QSPSDLSSED 428
           Q+ ++  SED
Sbjct: 418 QAVNE--SED 425


>gi|218133663|ref|ZP_03462467.1| hypothetical protein BACPEC_01532 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991038|gb|EEC57044.1| hypothetical protein BACPEC_01532 [Bacteroides pectinophilus ATCC
           43243]
          Length = 441

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 144/319 (45%), Positives = 208/319 (65%), Gaps = 5/319 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G  ++ LG P DG +     +  +E  +  P  M R  + +    G++ +D    +  GQ
Sbjct: 107 GHTLDGLGNPTDGTELTSYEEYPVE--AAPPDPMERVIISEILPLGVKAVDGLLTVGKGQ 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKSTL+ MFAR+   D  +I+L+GERGREVREF+E  LG + +K+SV+VV
Sbjct: 165 RVGIFAGSGVGKSTLMGMFARNTKADINVIALIGERGREVREFVERDLGTEGMKRSVLVV 224

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+  ++R  A  TA  IAEYF  +G +VLL++DS+TRF+ + REI   SGE PV RG
Sbjct: 225 ATSDKPALIRNKAAKTATAIAEYFRDQGRDVLLMMDSLTRFSMAQREIGLASGEPPVTRG 284

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SV+SE+P+LLER G S  +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+LNR 
Sbjct: 285 YPPSVYSEMPKLLERAGMS--DKGSITGLYTVLVDGDDFNEPITDTARSILDGHIMLNRK 342

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA++  YP VD L S+SR   +    + KK    L  ++  + E  D+  IG Y+ G + 
Sbjct: 343 LAQKNHYPAVDVLQSISRCMSQIVDKEHKKQAGKLKQVLATYGEAEDLINIGAYKAGSNK 402

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D A+ ++  + ++L Q 
Sbjct: 403 AIDYAIEKIDAVNEYLCQQ 421


>gi|254523895|ref|ZP_05135950.1| flagellar protein export ATPase FliI [Stenotrophomonas sp. SKA14]
 gi|219721486|gb|EED40011.1| flagellar protein export ATPase FliI [Stenotrophomonas sp. SKA14]
          Length = 465

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ + +    G+R I+   P+  G
Sbjct: 126 GRVIDSDGVPLDGKGPIRAEGHVGMAGVSINP--LAREPITQPLDVGVRAINALLPIGRG 183

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 184 QRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 243

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            + +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 244 ASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 303

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 304 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 363

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD+ W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 364 RVADSGLYPAIDVESSVSRVVTEIADEPW----RLRIRKLKRLVSAYSANRDLIAIGAYQ 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 420 RGNDAATDEALERWPEIMEFLGQ 442


>gi|190574236|ref|YP_001972081.1| putative flagellum-specific ATP synthase [Stenotrophomonas
           maltophilia K279a]
 gi|190012158|emb|CAQ45781.1| putative flagellum-specific ATP synthase [Stenotrophomonas
           maltophilia K279a]
          Length = 461

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ + +    G+R I+   P+  G
Sbjct: 122 GRVIDSDGVPLDGKGPIRAEGHVGMAGVSINP--LAREPITQPLDVGVRAINALLPIGRG 179

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 180 QRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 239

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            + +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 240 ASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 299

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 300 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 359

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD+ W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 360 RVADSGLYPAIDVESSVSRVVTEIADEPW----RLRIRKLKRLVSAYSANRDLIAIGAYQ 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 416 RGNDAATDEALERWPEIMEFLGQ 438


>gi|126174194|ref|YP_001050343.1| type III secretion system ATPase [Shewanella baltica OS155]
 gi|125997399|gb|ABN61474.1| ATPase, FliI/YscN family [Shewanella baltica OS155]
          Length = 443

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 159/368 (43%), Positives = 222/368 (60%), Gaps = 8/368 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+ +  +   + P  +   +  G+LV   G     P      GRV++ LG P+DG    
Sbjct: 65  EVVAVKGNEALLSPFDVTAGLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDG---Y 121

Query: 120 GKGDLSMEI-MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           G    ++       P  ++RQ ++     GIR ID       GQRIG+FA +G GKSTLL
Sbjct: 122 GLTATALRPNQGSAPNPLSRQLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKSTLL 181

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
            M A     D ++++LVGERGREVREFIE  L    + ++V+VVATSD  P+ R  A LT
Sbjct: 182 GMIAAHCQADVIVLALVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLT 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G NVLL++DS+TRFA S REIA  +GE PV+ GYP SVF  L  L+ER 
Sbjct: 242 ATTIAEYFRDQGKNVLLMVDSLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERA 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+   +G+IT + +VLV+GD+ N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASV
Sbjct: 302 GPA--AQGSITGIYTVLVEGDDMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASV 359

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+ D+  S +++   + +  L+  ++E + +  +G Y  G D   D+AV +   I  FL
Sbjct: 360 SRVMDQIVSPEQRCHAAKMRQLLALYQEVQLLIRVGEYVKGADKETDEAVARHQDIQQFL 419

Query: 418 KQSPSDLS 425
            QS ++ S
Sbjct: 420 CQSVNEFS 427


>gi|258514006|ref|YP_003190228.1| ATPase, FliI/YscN family [Desulfotomaculum acetoxidans DSM 771]
 gi|257777711|gb|ACV61605.1| ATPase, FliI/YscN family [Desulfotomaculum acetoxidans DSM 771]
          Length = 441

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 158/396 (39%), Positives = 231/396 (58%), Gaps = 7/396 (1%)

Query: 32  VYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
           V  TV  +     +G+   V+  G++   + +V+        + P+G  + I  G+ V  
Sbjct: 33  VGLTVEVVGIKASIGEVCHVIVPGRSRPIVAEVVGFMQGASILMPLGELQGIQPGNQVVP 92

Query: 90  WGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            GR   +  S    G V++ LG+ I G  + G+      + ++ P  + RQR+ +   TG
Sbjct: 93  TGRNLTVEVSDDMLGSVLDGLGRQIGGKTA-GEQKTKFPVDNQPPNPLTRQRIAQVLPTG 151

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           +R ID       GQRIG+FAGSG+GKSTLL M A+    D  +I L+GERGREV++FIE 
Sbjct: 152 VRAIDSVLTCGQGQRIGIFAGSGVGKSTLLGMIAKYGKADVNVIGLIGERGREVKDFIET 211

Query: 209 YLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
            LG+  L +SVVV ATSD+  ++R    + A  +AEYF +KG NV+L++DS+TRFA + R
Sbjct: 212 DLGEEGLSRSVVVAATSDQPALIRLKGAMVATALAEYFRNKGLNVMLLMDSVTRFAMAQR 271

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E+    GE P  +GY  SVF+ LP+LLER G S +  G+ITA  +VLVDGD+ N+PIAD+
Sbjct: 272 EVGLAVGEPPATKGYTPSVFALLPKLLERSGMSVE--GSITAFYTVLVDGDDMNEPIADA 329

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           VR ILDGHIVL R LA +  YP +D L+SVSR+     + +     + L  L+  + +  
Sbjct: 330 VRGILDGHIVLTRRLAAKNHYPAIDVLSSVSRVMSDIVNPEHLSRAARLRELLSTYLQAE 389

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           D+  IG Y  G +  +D A+     I +FL+Q P +
Sbjct: 390 DLISIGAYNFGANPKIDDAIRHYDNIIEFLRQHPEE 425


>gi|187926894|ref|YP_001893239.1| flagellar protein export ATPase FliI [Ralstonia pickettii 12J]
 gi|241665223|ref|YP_002983582.1| ATPase, FliI/YscN family [Ralstonia pickettii 12D]
 gi|187728648|gb|ACD29812.1| flagellar protein export ATPase FliI [Ralstonia pickettii 12J]
 gi|240867250|gb|ACS64910.1| ATPase, FliI/YscN family [Ralstonia pickettii 12D]
          Length = 479

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 202/324 (62%), Gaps = 7/324 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G+P+DG   LG  D L+   ++  P   + R+ +E     G+R I+    +  
Sbjct: 136 GRVVDANGEPLDGKGPLGNPDELAWGTLAPAPLNPLKRKPIENVMDVGVRAINGLLTVGQ 195

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S V
Sbjct: 196 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 255

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  
Sbjct: 256 VAAPADTSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 315

Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP S F++LP L+ER G     ++   G+ITA  +VL +GD+  DPIAD+ R+ILDGH
Sbjct: 316 KGYPPSAFAKLPALVERAGNGMVDADGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 375

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y
Sbjct: 376 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDTARRFKQLYARYQRNRDLIAVGAY 435

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D + D+A+ + P +  FL+Q
Sbjct: 436 ARGSDPVTDQAIARYPDMEAFLQQ 459


>gi|194365654|ref|YP_002028264.1| FliI/YscN family ATPase [Stenotrophomonas maltophilia R551-3]
 gi|194348458|gb|ACF51581.1| ATPase, FliI/YscN family [Stenotrophomonas maltophilia R551-3]
          Length = 461

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ + +    G+R I+   P+  G
Sbjct: 122 GRVIDSDGVPLDGKGPIRAEGHVGMAGVSINP--LAREPITQPLDVGVRAINALLPIGRG 179

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 180 QRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 239

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            + +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 240 ASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 299

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 300 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 359

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD+ W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 360 RVADSGLYPAIDVESSVSRVVTEIADEPW----RLRIRKLKRLVSAYSANRDLIAIGAYQ 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 416 RGNDAATDEALERWPEIMEFLGQ 438


>gi|289670550|ref|ZP_06491625.1| flagellum-specific ATP synthase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 382

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 147/343 (42%), Positives = 210/343 (61%), Gaps = 15/343 (4%)

Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  
Sbjct: 42  LGRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGR 99

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VV
Sbjct: 100 GQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVV 159

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  
Sbjct: 160 VAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTT 219

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+
Sbjct: 220 RGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLS 279

Query: 340 RSLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           R +A+ G YP +D  +SVSR    +AD  W    +K    L  L+  +   RD+  IG Y
Sbjct: 280 RRVADSGLYPAIDLESSVSRVVQDIADDTWRLRIRK----LKRLLSAYTANRDLIAIGAY 335

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + G D   D+A+ + P I +FL Q   D+    V  +    LQ
Sbjct: 336 QRGSDPATDEALARWPEIVEFLGQ---DVHKASVLSDSLSALQ 375


>gi|163750547|ref|ZP_02157785.1| flagellum-specific ATP synthase [Shewanella benthica KT99]
 gi|161329702|gb|EDQ00691.1| flagellum-specific ATP synthase [Shewanella benthica KT99]
          Length = 446

 Score =  266 bits (680), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 235/389 (60%), Gaps = 15/389 (3%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
           D + +VI  + +++Y+ P+     +  G  V   G +  ++      GRV++  G+P+D 
Sbjct: 59  DMVAEVIGFDDELLYLMPIEELRGVLPGAKVTPLGEQTGLNVGLALLGRVLDGNGQPLD- 117

Query: 116 DDSLGKGDLSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
             +LG+    +    K P   P +N   R+ + +    G+R I+    +  GQR+G+FAG
Sbjct: 118 --NLGR----LHTDQKAPRHAPTINPLARRAITEPLDVGVRAINAMLTVGKGQRMGLFAG 171

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
           SG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVVV A +D SP
Sbjct: 172 SGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSP 231

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           ++R  A  T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF+
Sbjct: 232 LMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFA 291

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +LP+L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G Y
Sbjct: 292 KLPKLVERAGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHY 351

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  AS+SR+A    S +  + +  +  +   F++ +D+  IG Y  G D  +D A+ 
Sbjct: 352 PAIDIEASISRVAPMVISTEHLESMRRVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIR 411

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             P +  FL+Q+ ++  S D  Q +  +L
Sbjct: 412 LQPAMNAFLRQTMTESLSFDSSQLMLSQL 440


>gi|283853244|ref|ZP_06370495.1| ATPase, FliI/YscN family [Desulfovibrio sp. FW1012B]
 gi|283571349|gb|EFC19358.1| ATPase, FliI/YscN family [Desulfovibrio sp. FW1012B]
          Length = 441

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 147/335 (43%), Positives = 211/335 (62%), Gaps = 5/335 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRVI+A G PIDG + +     +  + +  P  M+R R+ +    G+R I+    L  
Sbjct: 103 YLGRVIDAFGTPIDGGEPIFPARFN-PVFADAPMPMDRPRISEPMDVGVRAINGLLTLGK 161

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+ AGSG+GKSTL+ M AR+   D  +I LVGERGRE+REFIE  LG + + +SVV
Sbjct: 162 GQRVGIMAGSGVGKSTLMGMIARNTKADVNVIGLVGERGRELREFIEKDLGPEGMARSVV 221

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+SP++R  A   A  +AE+F   G++V+L++DS+TRFA + RE+   +GE P  
Sbjct: 222 VVATSDQSPLIRMRAAYAATAMAEFFRDAGNDVILMMDSVTRFAMAGREVGLAAGEPPTT 281

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGY  SVF++LP+LLER G      G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL 
Sbjct: 282 RGYTPSVFAQLPKLLERAG--RNNNGSITGIYTVLVDGDDFNEPIADAVRSILDGHIVLT 339

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA++G +P +D L S+SRL       D       L  L+  +    D+  IG Y  G 
Sbjct: 340 RDLADQGHFPAIDVLKSISRLRSDVTPKDALAAGRDLIRLLATYRRVEDMVNIGAYARGA 399

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +  +D+A+  +  I  +L+Q  ++  S E+ F  +
Sbjct: 400 NPEIDRAIDMIGPINGYLRQEVAESQSLEESFAAV 434


>gi|205352869|ref|YP_002226670.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272650|emb|CAR37560.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|309243397|gb|ADO51973.1| SsaN [Salmonella enterica subsp. enterica serovar Gallinarum]
 gi|326627941|gb|EGE34284.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 433

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRSHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|254253720|ref|ZP_04947037.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
 gi|124898365|gb|EAY70208.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
          Length = 463

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 157/368 (42%), Positives = 223/368 (60%), Gaps = 10/368 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117
           +V+  + D+  + P G    +S    V    R    RI P     GRVI++LG+PIDG  
Sbjct: 85  EVVGFSRDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L + D    +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL
Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + MFAR    D  +I+L+GERGREVREF E  LG D + +SVVV ATSD S I R  A  
Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAY 261

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER
Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S  E G+ITA+ +VL + ++  DPIA+ VR ILDGH++L+R +A + RYP +D L S
Sbjct: 322 AGRS--EHGSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +    +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I  F
Sbjct: 380 LSRVMTQVVPREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRAF 439

Query: 417 LKQSPSDL 424
           L Q P+DL
Sbjct: 440 LGQ-PTDL 446


>gi|10955560|ref|NP_052401.1| type III secretion system ATPase [Yersinia enterocolitica]
 gi|732261|sp|P40290|YSCN_YEREN RecName: Full=Probable ATP synthase YscN; AltName: Full=Yop
           proteins secretion ATPase
 gi|4324347|gb|AAD16824.1| ATPase YscN [Yersinia enterocolitica W22703]
 gi|318608201|emb|CBY78175.1| type III secretion cytoplasmic ATP synthase (EC 3.6.3.14,
           YscN,SpaL,MxiB,HrcN,EscN) [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 439

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID       GQ
Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G GKSTLL+   RS   D  +++L+GERGREVREFIE  LG+  L+K+V+VV
Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 223

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 224 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LPRL+ER G S K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R 
Sbjct: 284 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG Y+ G D 
Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 401

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425
             D+A+ ++  I  +L Q   +LS
Sbjct: 402 EADQAIERIGAIRGWLCQGTHELS 425


>gi|78047551|ref|YP_363726.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|294664062|ref|ZP_06729464.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325926456|ref|ZP_08187777.1| ATPase FliI/YscN family [Xanthomonas perforans 91-118]
 gi|78035981|emb|CAJ23672.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|292606165|gb|EFF49414.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325543155|gb|EGD14597.1| ATPase FliI/YscN family [Xanthomonas perforans 91-118]
          Length = 458

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 204/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSIGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD  W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435


>gi|294496835|ref|YP_003560532.1| type III secretion system ATPase [Yersinia pestis Z176003]
 gi|322836566|ref|YP_004210062.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis Java 9]
 gi|262363846|gb|ACY60566.1| type III secretion system ATPase [Yersinia pestis D106004]
 gi|262364003|gb|ACY64340.1| type III secretion system ATPase [Yersinia pestis D182038]
 gi|294352423|gb|ADE66480.1| type III secretion system ATPase [Yersinia pestis Z176003]
 gi|321161340|gb|ADW67046.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis Java 9]
          Length = 410

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID       GQ
Sbjct: 76  GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 134

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           R+G+FA +G GKSTLL+   RS   D  +++L+GERGREVREFIE  LG+  L+K+V+VV
Sbjct: 135 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 194

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 195 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 254

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LPRL+ER G S K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R 
Sbjct: 255 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 312

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG Y+ G D 
Sbjct: 313 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 372

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425
             D+A+ ++  I  +L Q   +LS
Sbjct: 373 EADQAIERMGAIRGWLCQGTHELS 396


>gi|207857079|ref|YP_002243730.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|206708882|emb|CAR33212.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
          Length = 433

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|169831908|ref|YP_001717890.1| flagellar protein export ATPase FliI [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638752|gb|ACA60258.1| flagellar protein export ATPase FliI [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 454

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 162/422 (38%), Positives = 242/422 (57%), Gaps = 12/422 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +  +   V  L+ ++     V   G+     G+V+        + P+G    I  
Sbjct: 27  GRVTKVVGLTVEVEGLNSFIGEICEVYVPGEIQPVRGEVVGFRGGTSLLMPLGELRGIRP 86

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPI--DGDDSLGK---GDLSMEIMSKVPPAMN 137
           G  V   GR   +       G+V+N LG P+   GD   G    G     + +  P  ++
Sbjct: 87  GCRVEPLGRALTVRVGEHLLGQVVNGLGYPLANGGDTRNGTRPDGAEEYPVHNAPPDPLS 146

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+R+++  +TG+R ID F     GQR+GVF+GSG+GKS LL M  R    D  +++LVGE
Sbjct: 147 RRRIDRPLETGVRAIDGFLTCGRGQRLGVFSGSGVGKSVLLGMLCRHCSADVNVVALVGE 206

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV++FIE  LG ++L +SVVVVATSD+  ++R  A + A  IAEYF  +G +VL ++
Sbjct: 207 RGREVKDFIERDLGPESLARSVVVVATSDQPALIRLRAAMVATAIAEYFRDRGKDVLFLM 266

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER G S    G+IT   +VLV+
Sbjct: 267 DSVTRFALAQREVGLAVGEPPTTRGYTPSVFALLPKLLERAGTSPA--GSITGFYTVLVE 324

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+  +P+AD+VRSILDGHIVL+R LA +  YP +D L SVSRL     + + ++  + L
Sbjct: 325 GDDLQEPVADAVRSILDGHIVLDRELAAKNHYPAIDVLQSVSRLMPDITAPEHQRCAAKL 384

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  F++  D+  IG Y  G + ++D+A+ +   I +FL+Q  ++      F E   +
Sbjct: 385 RRLLAAFKQAEDLVNIGAYVSGSNPLVDEALAKHEAIMEFLRQDHTEFGG---FAESLAR 441

Query: 437 LQ 438
           LQ
Sbjct: 442 LQ 443


>gi|21231371|ref|NP_637288.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66768576|ref|YP_243338.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113034|gb|AAM41212.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573908|gb|AAY49318.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 458

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 140/319 (43%), Positives = 202/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            +A+ G YP +D  +SVSR+     +   +  +  L  L+  +   RD+  IG Y+ G D
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIANDTWRLRIRKLKRLLSAYTANRDLIAIGAYQRGSD 416

Query: 401 LILDKAVHQVPIIYDFLKQ 419
              D+A+ + P I DFL Q
Sbjct: 417 PATDEALARWPEIVDFLGQ 435


>gi|73538925|ref|YP_299292.1| ATPase FliI/YscN [Ralstonia eutropha JMP134]
 gi|72122262|gb|AAZ64448.1| ATPase FliI/YscN [Ralstonia eutropha JMP134]
          Length = 488

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 147/333 (44%), Positives = 205/333 (61%), Gaps = 8/333 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVEKGFKT 147
           G  R+       GRV++A G+P+DG   LG    + E+     ++ P M R  ++    T
Sbjct: 135 GSKRLPVGEGMLGRVVDAAGRPLDG---LGPIRAAQEVPLSAEQINPLM-RAPIQTVLDT 190

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE
Sbjct: 191 GVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIE 250

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
             LG +   +SVVV A +D SP+LR      +  +AEYF  +G +VLLI+DS+TR+A + 
Sbjct: 251 HILGPEGRARSVVVAAPADCSPLLRMQGAAYSTRLAEYFRDQGKHVLLIMDSLTRYAMAQ 310

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA   GE P  +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIAD
Sbjct: 311 REIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDPIAD 370

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           S R+ILDGH+VL+RSLAE G YP +D  AS+SR        ++   V     L+ R++  
Sbjct: 371 SARAILDGHVVLSRSLAEAGHYPAIDVEASISRAMTALIPPEQFSSVRRFKQLMSRYQRN 430

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           RD+  +G Y PG D  LD A+   P +  FL+Q
Sbjct: 431 RDLISVGAYVPGNDPELDLAIRLHPRMEAFLQQ 463


>gi|167551616|ref|ZP_02345370.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205323605|gb|EDZ11444.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 433

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVDEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|148266220|ref|YP_001232926.1| flagellar protein export ATPase FliI [Geobacter uraniireducens Rf4]
 gi|146399720|gb|ABQ28353.1| type III secretion system ATPase, FliI/YscN [Geobacter
           uraniireducens Rf4]
          Length = 443

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 149/354 (42%), Positives = 214/354 (60%), Gaps = 5/354 (1%)

Query: 72  ICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+G    + LG L+     +  +       GRVI+ LG PID   ++  G+       
Sbjct: 72  LMPLGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGSPIDDRGAIITGEEYPIYAM 131

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
            V P M R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  
Sbjct: 132 PVNP-MKRRPIREPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVN 190

Query: 191 IISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGRE+REFIE D   + LKKSVVVVATSD+ P++R      A TIAEYF ++G
Sbjct: 191 VIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQG 250

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VLL++DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G      G+IT 
Sbjct: 251 KKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERAG--NFHGGSITG 308

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ N+P++D++RSILDGHI+L+R LA    YPP+D L S SR+     S + 
Sbjct: 309 LYTVLVEGDDFNEPVSDAMRSILDGHIILSRELAARNIYPPIDVLNSASRVMMDVTSREH 368

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +KL      ++  + +  D+  IG Y+PG +  +D A+ ++  +  +LKQ  +D
Sbjct: 369 QKLAGGFKGVLATYRQAEDLINIGAYKPGSNPKIDYAIAKIEHMNSYLKQDVND 422


>gi|283786637|ref|YP_003366502.1| T3SS translocator EscN [Citrobacter rodentium ICC168]
 gi|282950091|emb|CBG89725.1| T3SS translocator EscN [Citrobacter rodentium ICC168]
          Length = 446

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 154/379 (40%), Positives = 219/379 (57%), Gaps = 8/379 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +VI IN D V++ P      +  G  + + G  F+I       GR+++ +G+P+  + 
Sbjct: 67  LAEVIAINGDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 126

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GKSTL
Sbjct: 127 ATLYLPFKRSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 186

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           L M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A  T
Sbjct: 187 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 246

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LLER 
Sbjct: 247 ATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 306

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D   S 
Sbjct: 307 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+     I  FL
Sbjct: 365 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFL 424

Query: 418 KQSPSDLSS-----EDVFQ 431
           +QS  D+SS     E++F+
Sbjct: 425 QQSTKDISSYEKTIENLFK 443


>gi|95929852|ref|ZP_01312593.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684]
 gi|95134148|gb|EAT15806.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684]
          Length = 442

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 146/318 (45%), Positives = 204/318 (64%), Gaps = 3/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A+G  IDG  S    D  M + S  P  M R+++      G+R I+       GQ
Sbjct: 98  GRVLDAMGHAIDGLPS-PVLDQEMPVYSLPPGPMQRKKISDPLDLGVRAINGLLTCGRGQ 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+ AGSG+GKS LL   A+    D  +I+L+GERGREVREFIE  LG+  L +SVV+V
Sbjct: 157 RMGIMAGSGVGKSVLLGTMAKHSQSDINVIALIGERGREVREFIERDLGEEGLARSVVLV 216

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+SP+LR      A T+AEYF  +G NVLL++DS+TRFA ++RE+    GE P  +G
Sbjct: 217 ATSDQSPLLRMRGAFVATTLAEYFCQQGHNVLLMMDSVTRFAMAMREVGLAIGEPPTTKG 276

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF+ LP+LLER G S KE+G+IT + +VLV+GD+ N+PIADSVRSILDGHIVL+R 
Sbjct: 277 YTPSVFATLPKLLERAG-SFKEQGSITGLYTVLVEGDDMNEPIADSVRSILDGHIVLSRD 335

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA +  YP +D L S SR+       +  +  + +  ++   +E  D+  IG Y  G + 
Sbjct: 336 LAAKNHYPCIDILHSASRVMRDIVDPEHVQSAAQIREILATHKEAEDLINIGAYVAGSNP 395

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A+ ++  + DFL+Q
Sbjct: 396 KIDYAISRIDAVNDFLRQ 413


>gi|24374737|ref|NP_718780.1| flagellum-specific ATP synthase [Shewanella oneidensis MR-1]
 gi|24349399|gb|AAN56224.1|AE015760_3 flagellum-specific ATP synthase FliI [Shewanella oneidensis MR-1]
          Length = 445

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 146/367 (39%), Positives = 224/367 (61%), Gaps = 3/367 (0%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +V+  + +++Y+ P+     +  G  V   G +  ++      GRV++  G P+DG  
Sbjct: 61  IAEVVGFDDELLYLMPIEELRGVLPGARVVPLGEQAGLNVGLSLLGRVLDGNGVPLDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L     +    + + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 ALSTEQQAPRHSNAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS
Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    S +  + +  +      +++ +D+  IG Y  G D  +D A+   P +  F
Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419

Query: 417 LKQSPSD 423
           L+Q+  D
Sbjct: 420 LRQTMRD 426


>gi|127512300|ref|YP_001093497.1| flagellum-specific ATP synthase [Shewanella loihica PV-4]
 gi|126637595|gb|ABO23238.1| flagellar protein export ATPase FliI [Shewanella loihica PV-4]
          Length = 446

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 152/377 (40%), Positives = 225/377 (59%), Gaps = 9/377 (2%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEIS---LGDLVFHWG-RFRISPSACWCGRVINALGKP 112
           D + +VI  +  ++Y+ P+   EE+S    G  V   G +  ++      GRV++  G P
Sbjct: 59  DLIAEVIGFDDKLLYLMPI---EELSGVMPGAKVTPLGEQTGLNVGMGLLGRVLDGNGAP 115

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   L     +    + + P + R+ + +    G+R I+    +  GQR+G+FAGSG+
Sbjct: 116 IDGLGQLHTDQKATRHATMLNP-LARRAISEPLDVGVRAINAMLTVGKGQRMGLFAGSGV 174

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M  R    D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R
Sbjct: 175 GKSVLLGMMTRGTTADVIVVGLVGERGREVKEFIEEILGAEGRSRSVVVAAPADTSPLMR 234

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A  T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 235 LRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLP 294

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           +L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +
Sbjct: 295 KLVERAGNGGAGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRALADSGHYPAI 354

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR+A    S    +    +  +   +++ RD+  IG Y  G D  +D A+   P
Sbjct: 355 DVEASISRVAPMVISDAHLEATRRVKQMYSLYQQNRDLISIGAYTQGSDPRIDNAIRLQP 414

Query: 412 IIYDFLKQSPSDLSSED 428
            +  FL+Q+  +  S D
Sbjct: 415 AMNAFLRQTMKEAISFD 431


>gi|258622519|ref|ZP_05717541.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
 gi|258585219|gb|EEW09946.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
          Length = 455

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 142/368 (38%), Positives = 223/368 (60%), Gaps = 5/368 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S  W GRV+N LG+ +D    
Sbjct: 72  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPV 131

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L +G+ +S+E  SK    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 132 LNEGERVSLE--SKPINPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVL 189

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++  +GERGREVREFIE  L     KK++++ A +DESP++R  A L
Sbjct: 190 MGMITQNTDADVIVVGFIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATL 249

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + EYF  KG +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER
Sbjct: 250 LCHRVGEYFRDKGQDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 309

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE + G++TA+ +VL +GD+  DP+ DS R+ILDG++VL+R LAE+G YP +D  AS
Sbjct: 310 AGNSENQDGSLTAIYTVLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINAS 369

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR              +        + + +++  +GGY+PG D  LD+++   P +  +
Sbjct: 370 LSRCMMSCTQPTHSDTANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAY 429

Query: 417 LKQSPSDL 424
           L+Q+ +++
Sbjct: 430 LQQAANEV 437


>gi|168239299|ref|ZP_02664357.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194738136|ref|YP_002114428.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194713638|gb|ACF92859.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197287999|gb|EDY27386.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 433

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|288573027|ref|ZP_06391384.1| ATPase, FliI/YscN family [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288568768|gb|EFC90325.1| ATPase, FliI/YscN family [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 448

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 157/382 (41%), Positives = 226/382 (59%), Gaps = 9/382 (2%)

Query: 54  KNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111
           K   NL  +V+    D V + P+G   +I  G  V   GR   ++  +   GR+++ LG+
Sbjct: 57  KGRKNLEAEVVGFRDDRVLLMPLGELRDIGPGCEVVSMGRPLGVNVGSGLLGRILDGLGR 116

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+D    +G  +    + +  P  + RQ + +    G+R +D    L  GQRIG+F+GSG
Sbjct: 117 PMDEKGPVGSSEF-YPLYATPPHPLRRQNISEPLPVGVRAVDGVLTLGRGQRIGIFSGSG 175

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           +GKSTLL M AR+   +  +I LVGERGREVREFIE  LG + LK+SV+VVATSD+ P++
Sbjct: 176 VGKSTLLGMMARNTEAEINVIGLVGERGREVREFIERDLGPEGLKRSVLVVATSDQPPLV 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R  A  TA  +AEYF  +G +VLL++DS+TR A++ RE+    GE P  RGY  SVF+ L
Sbjct: 236 RLKAAFTATAVAEYFRDQGKDVLLMMDSVTRVAYAQREVGLAVGEPPATRGYTPSVFALL 295

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           PRLLER G     +G+IT + +VLV+GD+ N+P+ADSVR ILDGH+VL+R +A    YP 
Sbjct: 296 PRLLERAGAG--TRGSITGIYTVLVEGDDMNEPVADSVRGILDGHVVLSRKIAARNFYPC 353

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D L SVSR+               +  ++ R+ E  D+  IG Y  G +   D A+  +
Sbjct: 354 IDILNSVSRVMPSIVDKVHLDGAGRIREVLARYAEAEDLIAIGAYHKGSNPRADWALDNL 413

Query: 411 PIIYDFLKQSPSDLSSEDVFQE 432
             +  FL+Q   + SS   F+E
Sbjct: 414 GDVEAFLRQGIGEASS---FEE 432


>gi|168463175|ref|ZP_02697106.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197249395|ref|YP_002146627.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|195634193|gb|EDX52545.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197213098|gb|ACH50495.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
          Length = 433

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|21242695|ref|NP_642277.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108168|gb|AAM36813.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 458

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 204/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSIGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD  W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435


>gi|323256480|gb|EGA40213.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
          Length = 392

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 8   KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLGRVIDGFGRP 67

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 68  LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 125

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 126 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 185

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 186 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 245

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 246 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 303

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 304 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 363

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 364 DICTFLRQSKDEVCGPELLIE 384


>gi|145597142|ref|YP_001154606.1| type III secretion system ATPase [Yersinia pestis Pestoides F]
 gi|145212910|gb|ABP42316.1| type III secretion system ATPase, FliI/YscN [Yersinia pestis
           Pestoides F]
          Length = 439

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID       GQ
Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G GKSTLL+   RS   D  +++L+GERGREVREFIE  LG+  L+K+V+VV
Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 223

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 224 ATSDRPSLERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LPRL+ER G S   KG+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R 
Sbjct: 284 YPPSVFAALPRLMERAGQS--SKGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG Y+ G D 
Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 401

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425
             D+A+ ++  I  +L Q   +LS
Sbjct: 402 EADQAIERMGAIRGWLCQGTHELS 425


>gi|289666084|ref|ZP_06487665.1| flagellum-specific ATP synthase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 458

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 204/323 (63%), Gaps = 12/323 (3%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI++ G P+DG   +  +G + M  +S  P  + R+ +      G+R I+   P+  G
Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+E  LG+  L+++VVV
Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + REI  + GE P  R
Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHI+L+R
Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356

Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            +A+ G YP +D  +SVSR    +AD  W    +  +  L  L+  +   RD+  IG Y+
Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D   D+A+ + P I +FL Q
Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435


>gi|156974019|ref|YP_001444926.1| type III secretion system ATPase [Vibrio harveyi ATCC BAA-1116]
 gi|41834180|gb|AAS13318.1| VscN [Vibrio harveyi]
 gi|156525613|gb|ABU70699.1| hypothetical protein VIBHAR_01730 [Vibrio harveyi ATCC BAA-1116]
          Length = 440

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PS+L
Sbjct: 371 APAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSEL 427


>gi|304412516|ref|ZP_07394122.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|307307175|ref|ZP_07586913.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
 gi|304349158|gb|EFM13570.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|306910414|gb|EFN40845.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
          Length = 445

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 154/383 (40%), Positives = 233/383 (60%), Gaps = 12/383 (3%)

Query: 45  LGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD    +G+N   +  +V+  + D++ + P+   + +  G  V        I+      
Sbjct: 39  MGDRCQIEGRNGRLIEAEVVGFHRDVLCLMPIEPTQGLMPGARVLPITDEQTIAIGDGLL 98

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPL 158
           GRV++ LG+P+D   SLG  DL+ +  +S+   + N   RQ + +    GIR I+   P+
Sbjct: 99  GRVLDGLGQPLD---SLG--DLTDISQVSQSHTSYNPLLRQPIRQPLDVGIRAINSLLPI 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
             GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREVREFIE+ LG+   K++
Sbjct: 154 GRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEETLGEEGRKRA 213

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V++ A +D +P++R  A   + +IA  F  +G  VLL++DS+TR+A + REIA + GE P
Sbjct: 214 VIIAAPADTTPLMRLRAMRLSHSIACAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPP 273

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP S F++LPRL+E  G  E   G +TA  +VL +GD+  DP+AD+ R+ILDGHIV
Sbjct: 274 ATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVLAEGDDQQDPVADAARAILDGHIV 333

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R LAE+G +P +D  ASVSRLA    ++   +      HL+ R+ E RD+  +GGY+ 
Sbjct: 334 LSRKLAEQGHFPAIDINASVSRLAMHIATSSSIEQSQIFRHLLSRYNEVRDLLPLGGYQA 393

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
           G D  +D AV   P +  FL+Q+
Sbjct: 394 GQDPEMDLAVRVYPEMARFLRQT 416


>gi|114319873|ref|YP_741556.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226267|gb|ABI56066.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 458

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 150/386 (38%), Positives = 224/386 (58%), Gaps = 6/386 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKP 112
           ++ D   +V+    D +Y+ P G +   +    +V   G           GRV++  G+P
Sbjct: 62  QDRDVEAEVVGFAGDKLYLMPTGELHGMMPNARVVPRGGTAEAGMGPGLLGRVLDGGGRP 121

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG   L   +    +   + P + R  ++     G+R I+    +  GQR+G+FAGSG+
Sbjct: 122 LDGKGLLDHSEYRSLVGEGINP-LARAPIKAPLDVGVRAINSLFTVGRGQRMGLFAGSGV 180

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILR 231
           GKS LL M  R    D V++ L+GERGREV+EFI D LGD  L +SVVV + +D+SP++R
Sbjct: 181 GKSVLLGMMTRYTNADVVVVGLIGERGREVKEFITDILGDEGLARSVVVASPADKSPLMR 240

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               + A +IAEYF  +G NVLL++DS+TR+A + REI    GE P  +GYP SVF+ LP
Sbjct: 241 LHGAMLATSIAEYFRDQGLNVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFALLP 300

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RL+ER G    + G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R LA+ G YP +
Sbjct: 301 RLVERAGNGPDDGGSITAFYTVLTEGDDQQDPIADAARAILDGHLVLSRQLADAGHYPAI 360

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  ASVSR          ++L      L   + E +D+  +G Y+ G D  +D+A+  +P
Sbjct: 361 DIEASVSRAMINITERGHQRLAQRFRQLWSTYRENQDLISVGAYQKGSDPRVDEAIAIMP 420

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   D+S+   F E  ++L
Sbjct: 421 RLRAFLQQ---DVSTAVNFGESLEQL 443


>gi|157376195|ref|YP_001474795.1| flagellum-specific ATP synthase [Shewanella sediminis HAW-EB3]
 gi|157318569|gb|ABV37667.1| flagellar protein export ATPase FliI [Shewanella sediminis HAW-EB3]
          Length = 446

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 149/372 (40%), Positives = 227/372 (61%), Gaps = 3/372 (0%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +VI  + +++Y+ P+     +  G  V   G +  ++      GRV++  G P+DG  
Sbjct: 61  VAEVIGFDGELLYLMPIEELRGVLPGAKVTPLGEQTGLNVGMSLLGRVLDGSGHPLDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L + +      S+V   ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 RL-QTEQRAPRHSQVINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADVIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS
Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    S +  + +  +  +   F++ +D+  IG Y  G D  +D A+   P +  F
Sbjct: 360 ISRVAPMVISPEHLESMRCVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAF 419

Query: 417 LKQSPSDLSSED 428
           L+Q+  +  S D
Sbjct: 420 LRQTMKEALSFD 431


>gi|56460305|ref|YP_155586.1| flagellum-specific ATP synthase [Idiomarina loihiensis L2TR]
 gi|56179315|gb|AAV82037.1| type III secretory pathway ATPase [Idiomarina loihiensis L2TR]
          Length = 449

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 240/427 (56%), Gaps = 8/427 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYY-TVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           ++ L +  E   K  V   GY++ +  + +  V C +    +G  V  +  + D   +V+
Sbjct: 8   VKQLRKKRERIQKPSVAVSGYLTRVVGLMFEAVGCRA---PVGSSVAVEADSGDIEAEVV 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKG 122
               +I Y+ P      +  G  V    R    P      GRVI+A G+P+D    +   
Sbjct: 65  GFEGNISYLMPTEDAHGVIPGARVRPLNRKNQLPLGMELLGRVIDARGEPLDDKGPIFSD 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             +    SK    +NR++V++    G+  I+    +  GQR+G+FAGSG+GKS LL M  
Sbjct: 125 GKTYR--SKPMNPLNRRQVKQPLDVGVTAINACLTVGQGQRMGLFAGSGVGKSVLLGMMT 182

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D +++ L+GERGREV+EFIE+ LG+   +K+VV+ A +D+SP++R     TA  +
Sbjct: 183 RGTTADVIVVGLIGERGREVKEFIEEILGEEGREKAVVIAAPADQSPLIRLRGCETASQV 242

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   
Sbjct: 243 AEYFRDQGLNVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGG 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G++TA  +VL +GD+  DPIADS R+ILDGHIVLNR LA+ G YP +D  AS+SR+ 
Sbjct: 303 DGQGSVTAFYTVLTEGDDLQDPIADSARAILDGHIVLNRELADSGHYPAIDIEASISRVM 362

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  S +  +    +      +   RD+  IG Y  G D  +D+A+   P +  FL+Q  
Sbjct: 363 PQVVSEEHMQQAIKVRQWYSSYRRNRDLISIGAYTRGSDPAIDQAIAMQPRVSMFLQQKM 422

Query: 422 SDLSSED 428
            ++ + D
Sbjct: 423 REVVNYD 429


>gi|16082728|ref|NP_395174.1| type III secretion system ATPase [Yersinia pestis CO92]
 gi|28373029|ref|NP_783675.1| type III secretion system ATPase [Yersinia enterocolitica]
 gi|31795281|ref|NP_857742.1| type III secretion system ATPase [Yersinia pestis KIM]
 gi|31795483|ref|NP_857937.1| type III secretion system ATPase [Yersinia pestis KIM]
 gi|32470288|ref|NP_863523.1| type III secretion system ATPase [Yersinia enterocolitica]
 gi|45478544|ref|NP_995371.1| type III secretion system ATPase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51593909|ref|YP_068476.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP
           32953]
 gi|108793664|ref|YP_636814.1| type III secretion system ATPase [Yersinia pestis Antiqua]
 gi|122815812|ref|YP_001004078.1| type III secretion system ATPase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|149192699|ref|YP_001293931.1| type III secretion system ATPase [Yersinia pestis CA88-4125]
 gi|162417750|ref|YP_001604472.1| type III secretion system ATPase [Yersinia pestis Angola]
 gi|165927829|ref|ZP_02223661.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165940068|ref|ZP_02228602.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011707|ref|ZP_02232605.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166214459|ref|ZP_02240494.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401924|ref|ZP_02307410.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422384|ref|ZP_02314137.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167422395|ref|ZP_02314148.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167422904|ref|ZP_02314657.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426875|ref|ZP_02318628.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|186897574|ref|YP_001874685.1| type III secretion system ATPase [Yersinia pseudotuberculosis
           PB1/+]
 gi|229896856|ref|ZP_04512016.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis Pestoides A]
 gi|229900211|ref|ZP_04515347.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|55977793|sp|P40291|YSCN_YERPS RecName: Full=Probable ATP synthase YscN; AltName: Full=Yop
           proteins secretion ATPase
 gi|14579346|gb|AAK69223.1|AF336309_18 YscN [Yersinia enterocolitica]
 gi|2996241|gb|AAC62564.1| Yops secretion ATPase YscN homolog [Yersinia pestis KIM 10]
 gi|3822071|gb|AAC69791.1| Yops secretion protein [Yersinia pestis KIM 10]
 gi|5832460|emb|CAB54917.1| putative Yops secretion ATP synthase [Yersinia pestis CO92]
 gi|23630601|gb|AAN37557.1| YscN [Yersinia enterocolitica]
 gi|45357166|gb|AAS58562.1| putative Yops secretion ATP synthase YscN [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51591606|emb|CAF25410.1| putative Yops secretion ATP synthase [Yersinia pseudotuberculosis
           IP 32953]
 gi|108782211|gb|ABG16266.1| type III secretion system ATPase, FliI/YscN [Yersinia pestis
           Antiqua]
 gi|121663686|emb|CAL10048.1| probable type III secretion system ATP synthase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|148872357|gb|ABR14847.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis CA88-4125]
 gi|162354770|gb|ABX88717.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis Angola]
 gi|165911978|gb|EDR30621.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920265|gb|EDR37566.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165989314|gb|EDR41615.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204352|gb|EDR48832.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958194|gb|EDR55215.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|166958621|gb|EDR55642.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|166958632|gb|EDR55653.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048652|gb|EDR60060.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054174|gb|EDR64001.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|186700600|gb|ACC91228.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pseudotuberculosis PB1/+]
 gi|229686731|gb|EEO78811.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229700127|gb|EEO88166.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis Pestoides A]
 gi|310923231|emb|CBW54697.1| YscN, T3SS ATPase, PMID 17050689 [Yersinia enterocolitica (type
           O:8)]
          Length = 439

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID       GQ
Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G GKSTLL+   RS   D  +++L+GERGREVREFIE  LG+  L+K+V+VV
Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 223

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 224 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LPRL+ER G S K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R 
Sbjct: 284 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG Y+ G D 
Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 401

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425
             D+A+ ++  I  +L Q   +LS
Sbjct: 402 EADQAIERMGAIRGWLCQGTHELS 425


>gi|168240928|ref|ZP_02665860.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|194450969|ref|YP_002045418.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|200391071|ref|ZP_03217682.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|194409273|gb|ACF69492.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|199603516|gb|EDZ02062.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205339235|gb|EDZ25999.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
          Length = 433

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|30250026|ref|NP_842096.1| flagellar ATP synthase [Nitrosomonas europaea ATCC 19718]
 gi|30139133|emb|CAD85997.1| Flagellar ATP synthase [Nitrosomonas europaea ATCC 19718]
          Length = 478

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/344 (42%), Positives = 208/344 (60%), Gaps = 5/344 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           IS      GRV+N  G P+D    L  G  S+ + S+    + R  +EK    G+R I+ 
Sbjct: 134 ISVGPELLGRVLNGSGDPLDRYGPLHCGH-SVPLYSRPFNPLERAPIEKTLDVGVRAINT 192

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + 
Sbjct: 193 LLSVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVQEFIEHILGPEG 252

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVV A +D SP++R      A  IAEYF  +G +VLLI+DS+TR A + REI+   
Sbjct: 253 LARSVVVAAPADTSPLMRLHGAAYATAIAEYFRDEGKHVLLIMDSLTRVAMAQREISLAI 312

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF+ LP+L+ER G   +  G+ITA  +VL + D+ NDPIAD+ R+ILD
Sbjct: 313 GEPPATKGYPPSVFARLPQLVERAGNGRRGSGSITAFYTVLTENDDPNDPIADNARAILD 372

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR+     + ++         L  R++ + D+  +G
Sbjct: 373 GHIVLSRRLAEAGHYPAIDIEASISRVMASLVTREQLGQAQRFKALYSRYQRSHDLISVG 432

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            Y  G D  LD+A+   P++  FL+Q    +  ++ + E  +KL
Sbjct: 433 AYASGSDPQLDRAIELYPVLESFLQQG---MFEQESYIESMEKL 473


>gi|83747851|ref|ZP_00944884.1| HrcN [Ralstonia solanacearum UW551]
 gi|207724591|ref|YP_002254988.1| hrp protein hrcn [Ralstonia solanacearum MolK2]
 gi|207739226|ref|YP_002257619.1| hrp protein hrcn [Ralstonia solanacearum IPO1609]
 gi|83725498|gb|EAP72643.1| HrcN [Ralstonia solanacearum UW551]
 gi|206589813|emb|CAQ36774.1| hrp conserved protein hrcn [Ralstonia solanacearum MolK2]
 gi|206592599|emb|CAQ59505.1| hrp conserved protein hrcn [Ralstonia solanacearum IPO1609]
          Length = 439

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 201/327 (61%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P DG   L   +  + + +  P  M R+ VE    TG+RVID    L  GQ
Sbjct: 104 GRVLDGLGRPADGGPPLDVVE-HVPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FA +G+GKSTL+ MFAR    D  +I L+GERGREVREFIE  LG + +++SVVV 
Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD S + R  A      +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 223 ATSDRSAVERAKAAHVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+ELPRLLER G S    G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R 
Sbjct: 283 FPPSVFAELPRLLERAGMS--SAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   RYP +D L S+SR+  +    +       +  L+ ++ E   +  +G Y+ G D 
Sbjct: 341 IAARNRYPAIDILNSLSRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           + D AV     +  FL+Q   +  S D
Sbjct: 401 VADAAVQWNDWMEGFLRQRTDEWCSPD 427


>gi|153832446|ref|ZP_01985113.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio harveyi HY01]
 gi|148871241|gb|EDL70113.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio harveyi HY01]
          Length = 440

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PS+L
Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRSDMAIAQGDDIRAFLRQGTHEPSEL 427


>gi|213647283|ref|ZP_03377336.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 433

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           +DG    D   K   +M      PPAM RQ + +   TGIR ID       GQR+G+F+ 
Sbjct: 109 LDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228
            G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   
Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS
Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y
Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+ 
Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAID 401

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432
             P I  FL+QS  ++   ++  E
Sbjct: 402 TYPDICTFLRQSKDEVCGPELLIE 425


>gi|254469170|ref|ZP_05082575.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pseudovibrio sp. JE062]
 gi|211961005|gb|EEA96200.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pseudovibrio sp. JE062]
          Length = 458

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 203/330 (61%), Gaps = 3/330 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV++ +G  IDG D     +    +    P  M RQ ++K    G+R ID       
Sbjct: 121 LLGRVLDGMGNFIDGVDQEFVPETHYPVNQDPPDPMQRQIIDKPLPMGVRAIDGMLTTGE 180

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FA +G GKSTL++M  +    D  +++L+GERGREVREFIE  LG + +KKSVV
Sbjct: 181 GQRMGIFASAGGGKSTLMAMLVKGAAVDVTVLALIGERGREVREFIEHDLGPEGMKKSVV 240

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+S + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI    GE P  
Sbjct: 241 VVATSDKSSLERSKAAFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAVGEPPTR 300

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RG+P SVF+ LPRL+ER G +  +KG+ITA  +VL++GD+ N+P++D  RSILDGHIVL+
Sbjct: 301 RGFPPSVFATLPRLMERAGMN--DKGSITAFYTVLMEGDDMNEPVSDETRSILDGHIVLS 358

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA    YP +D L S SR+     S + +++   +  L+ ++EE   +  IG Y+ G 
Sbjct: 359 RKLAAANHYPAIDILNSKSRVMTAVTSPEHREMSGKVNSLLAKYEEVELLVQIGEYQKGA 418

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           D   D A+ +   I +FL+Q   +    DV
Sbjct: 419 DSEADLAIAKNKPIKEFLQQRTDEFDGFDV 448


>gi|152986739|ref|YP_001349621.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PA7]
 gi|150961897|gb|ABR83922.1| flagellar protein export ATPase FliI [Pseudomonas aeruginosa PA7]
          Length = 451

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 146/355 (41%), Positives = 213/355 (60%), Gaps = 7/355 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           VY+ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   +   D   
Sbjct: 77  VYLMPVGSLAGIAPGARVVPLPDTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDWVP 134

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 135 MDGPTINP-LKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTR 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFI++ LG+  LK+SVVV + +D++P++R  A      IAEYF
Sbjct: 194 ADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G +E   G
Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG YP +D  AS+SR+  +  
Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +       L  R++++RD+  +G Y  G D   D A+ + P +  FL+Q+
Sbjct: 374 EPGHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDAETDLAIARFPAMRQFLRQA 428


>gi|269105047|ref|ZP_06157742.1| Type III secretion cytoplasmic ATP synthase [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268160682|gb|EEZ39180.1| Type III secretion cytoplasmic ATP synthase [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 421

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 69  VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 113

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 114 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 173

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 174 LALIGERGREVREFIEHDLGEKGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 233

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 234 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 291

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      +
Sbjct: 292 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 351

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PS+L
Sbjct: 352 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSEL 408


>gi|269963174|ref|ZP_06177509.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832138|gb|EEZ86262.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 440

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGTQS-KEPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLITCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S  +KG+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQS--DKGSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PS+L
Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTXEPSEL 427


>gi|51860705|gb|AAU11472.1| putative TTSS ATPase N [Photobacterium damselae subsp. piscicida]
          Length = 440

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G++++ LG+P DG  S  +      +   
Sbjct: 88  VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 132

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + +SV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 193 LALIGERGREVREFIEHDLGEKGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+
Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      +
Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PS+L
Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRVFLRQGTHEPSEL 427


>gi|146312178|ref|YP_001177252.1| flagellum-specific ATP synthase [Enterobacter sp. 638]
 gi|145319054|gb|ABP61201.1| ATPase, FliI/YscN family [Enterobacter sp. 638]
          Length = 456

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/369 (41%), Positives = 215/369 (58%), Gaps = 12/369 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGK 111
           +V+  N   +++ P+   E I  G  V+         H G+ ++       GRV++  GK
Sbjct: 68  EVVGFNGQRLFLMPLEEVEGILPGARVYAKNNSGDGLHSGK-QLPLGPALLGRVLDGAGK 126

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG  S    +    I   V P + R  +E    TG+R I+    +  GQR+G+FAGSG
Sbjct: 127 PLDGLPSPDTTETGALITQPVNP-LQRTAIEHVLDTGVRPINALLTVGRGQRMGLFAGSG 185

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           +GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+L
Sbjct: 186 VGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLL 245

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++L
Sbjct: 246 RMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 305

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP 
Sbjct: 306 PALVERAGNGITGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPA 365

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR      +      V +   L+  F+  RD+  +G Y  G D +LDKA+   
Sbjct: 366 IDIEASISRAMTSLITEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIAVW 425

Query: 411 PIIYDFLKQ 419
           P +  FL+Q
Sbjct: 426 PQLEAFLQQ 434


>gi|258624658|ref|ZP_05719593.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
 gi|258583050|gb|EEW07864.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
          Length = 449

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/368 (38%), Positives = 223/368 (60%), Gaps = 5/368 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S  W GRV+N LG+ +D    
Sbjct: 66  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPV 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L +G+ +S+E  SK    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LNEGERVSLE--SKPINPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++  +GERGREVREFIE  L     KK++++ A +DESP++R  A L
Sbjct: 184 MGMITQNTDADVIVVGFIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + EYF  KG +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVGEYFRDKGQDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE + G++TA+ +VL +GD+  DP+ DS R+ILDG++VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENQDGSLTAIYTVLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR              +        + + +++  +GGY+PG D  LD+++   P +  +
Sbjct: 364 LSRCMMSCTQPTHSDTANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAY 423

Query: 417 LKQSPSDL 424
           L+Q+ +++
Sbjct: 424 LQQAANEV 431


>gi|331005450|ref|ZP_08328829.1| flagellum-specific ATP synthase [gamma proteobacterium IMCC1989]
 gi|330420726|gb|EGG95013.1| flagellum-specific ATP synthase [gamma proteobacterium IMCC1989]
          Length = 434

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 7/379 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           +VI IN + V + P G    +S+G  V   GR    P      GRV++A G P+D D   
Sbjct: 55  EVIGINANKVLLMPYGHTSGVSVGSDVVATGRKVEMPVGDNMLGRVLDAFGNPLD-DQPK 113

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   +  K    +NR  +++   TG++ ID    +  GQR+G+FAGSG+GKSTLL 
Sbjct: 114 PVASAHYPLYKKPINPLNRPPIKEILHTGVKAIDSLITVGRGQRLGIFAGSGVGKSTLLG 173

Query: 180 MFARS-DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237
           M A+  DC D  +I+LVGERGREV +FI   LG+  LKKSVV+ ATSDE+ ++R  A   
Sbjct: 174 MIAKGLDC-DVNVIALVGERGREVSDFIYKVLGEEGLKKSVVIAATSDENALVRSHAAWG 232

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  V+L +DS+TR A + REI  + GE P  +GY  SVFS LPRLLER 
Sbjct: 233 ATAIAEYFRDQGKKVILTMDSVTRLAMAQREIGLSVGEPPTTKGYTPSVFSVLPRLLERA 292

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S K  G+ITA  +VLV+GD+ N+P++D VRSILDG I L+R+LA++  +P +D L S 
Sbjct: 293 GTS-KNGGSITAFYTVLVEGDDTNEPVSDHVRSILDGTITLSRALAQKRHFPSIDILQSN 351

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL +      E   +     ++  +E  R++  +G Y  G +  LDK + ++  I  FL
Sbjct: 352 SRLINDLVDQKEYLQIRQFVEMLELYERYREMVDMGIYNHGTNPKLDKVLGKLEDIQKFL 411

Query: 418 KQSPSD-LSSEDVFQEITK 435
           +Q P D  + E+  + ITK
Sbjct: 412 QQEPKDSFTREESLKNITK 430


>gi|87119484|ref|ZP_01075381.1| flagellum-specific ATP synthase FliI [Marinomonas sp. MED121]
 gi|86164960|gb|EAQ66228.1| flagellum-specific ATP synthase FliI [Marinomonas sp. MED121]
          Length = 441

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 155/397 (39%), Positives = 225/397 (56%), Gaps = 8/397 (2%)

Query: 32  VYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--- 87
           V  T+  +   V LGD   V   KN     +V+    ++ Y+ P      IS G  V   
Sbjct: 32  VGLTMEAVGCKVALGDRCSVQVRKNKWVESEVVGFTGNLTYLMPTEAINGISPGARVKPL 91

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
              G   + P     GRV+N LG P+DG   + K    + +   +   + R+ +      
Sbjct: 92  MGEGMMMVGPE--LLGRVVNGLGYPLDGKGPI-KAKEKIGMQGDIINPLKRKPITDTLDV 148

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           GI+ I+    +  GQR+G+FAGSG+GKS LL M  R    D  I+ L+GERGREV+EFIE
Sbjct: 149 GIKSINSLLTVGKGQRLGLFAGSGVGKSMLLGMMTRFTEADITIVGLIGERGREVKEFIE 208

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
             LG + L +SVV+ + +D+S ++R  A      IAEY+  +G NVLL++DS+TR+A + 
Sbjct: 209 QILGSEGLARSVVIASPADDSALMRLRAATLTTRIAEYYRDQGKNVLLLMDSLTRYAQAQ 268

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA + GE P  +GYP SVFS++P+L+ER G   +  G+ITA  +VL +GD+  DPIAD
Sbjct: 269 REIALSVGEPPATKGYPPSVFSKIPQLVERAGNGAEGSGSITAFYTVLTEGDDQQDPIAD 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGH VL+R LAEEG YP +D  AS+SR      S    K    +  L  ++++ 
Sbjct: 329 ASRAILDGHFVLSRRLAEEGHYPAIDIEASISRAMPHIVSDAHLKGALRVKQLYSKYQQN 388

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +D+  +G Y  G D   D+A+  +P I  FL+Q  S+
Sbjct: 389 QDLIAVGAYVKGADPDTDQAIALMPEIKSFLQQGLSE 425


>gi|126734101|ref|ZP_01749848.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. CCS2]
 gi|126716967|gb|EBA13831.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. CCS2]
          Length = 450

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 155/418 (37%), Positives = 232/418 (55%), Gaps = 3/418 (0%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ+NL    + A D    +   G  I       ++  C      +GD           + 
Sbjct: 1   MQENLLDQMRRAVDQLSYIHTAGRVIGVSAGTVHS-ACTQGETRVGDRATLHTAAGKRMA 59

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V++++    ++   G  + +S+ D V        +P   W GRVI+  G+P+DG   L 
Sbjct: 60  EVVKLDQVGAHLLVDGATDGVSINDPVVFQRAPIFAPHTGWIGRVIDPDGRPLDGQPLL- 118

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G  + ++    P +  R+ +    +TG+ V +   PL  GQR+G+FAGSG+GKSTLL+ 
Sbjct: 119 PGAQNGDLNRSPPSSHERRGLGARLETGLAVFNTLLPLVRGQRVGLFAGSGVGKSTLLAD 178

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR    D ++I+LVGERGREV  F++D LG D + ++VVV ATSD  P +R+   L+A+
Sbjct: 179 LARGVQADVIVIALVGERGREVGHFVQDVLGADGMGRAVVVAATSDTGPQVRRRCALSAM 238

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AE F   G +VLL++DS+TRF  + RE+A  SGE    RGYP S    + RL ER GP
Sbjct: 239 VVAESFRDAGLHVLLLIDSVTRFCEAHRELAVASGESANLRGYPASTGPAIARLCERAGP 298

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITAV SVLV G + ++P+AD +R +LDGHIVL+R +AE GR+P VD + SVSR
Sbjct: 299 GAGASGDITAVFSVLVAGSDMDEPVADMLRGVLDGHIVLDREIAERGRFPAVDVVRSVSR 358

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
               A +  E ++++    L+  +  +  +   G Y  G D +LD A+   P + DFL
Sbjct: 359 ALPDAANEKENEIIAKARSLLGTYVRSEMMVQAGLYVSGSDPLLDAAIAAQPALEDFL 416


>gi|118581829|ref|YP_903079.1| flagellar protein export ATPase FliI [Pelobacter propionicus DSM
           2379]
 gi|118504539|gb|ABL01022.1| type III secretion system ATPase, FliI/YscN [Pelobacter propionicus
           DSM 2379]
          Length = 439

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/343 (44%), Positives = 211/343 (61%), Gaps = 15/343 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
             GRVI+ LG PID      +G L +E    I +     M R  + K    GIR I+   
Sbjct: 102 MLGRVIDGLGNPIDD-----RGPLHVEEEYPIYATPVNPMTRPPIRKPLDLGIRSINGLL 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLK 215
               GQR+G+ AGSG+GKSTLL M AR    D  +I+L+GERGRE+REFIE  L +  LK
Sbjct: 157 TCGQGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEIGLK 216

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           KSVVVVATSD+ P++R      A TIAEYF  +G  VLL++DS+TRFA ++RE+    GE
Sbjct: 217 KSVVVVATSDQPPLVRMRGAYIATTIAEYFQKQGKKVLLMMDSVTRFAMAMREVGLAIGE 276

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GY  SVF+ LP+LLER G      G+IT + +VLV+GD+ N+PI+D+VRSILDGH
Sbjct: 277 PPTTKGYTPSVFAALPKLLERAG--NFTDGSITGLYTVLVEGDDFNEPISDAVRSILDGH 334

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R+LA    YPP+D LAS SR+ +     D ++LV      +  + ++ D+  IG Y
Sbjct: 335 IVLTRNLASRNIYPPIDILASASRVMNDVTVTDHQELVGKFKEAMATYRQSEDLINIGAY 394

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + G +  +D A+ ++  +  +LKQ+  D ++    QE  + L+
Sbjct: 395 KSGSNPGIDYAISKMDGMTAYLKQAVRDPAN---LQESVESLK 434


>gi|262173385|ref|ZP_06041062.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
 gi|261890743|gb|EEY36730.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
          Length = 449

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/368 (38%), Positives = 223/368 (60%), Gaps = 5/368 (1%)

Query: 60  GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            QV+  +  + Y+ P+  +G   +   ++   G   +  S  W GRV+N LG+ +D    
Sbjct: 66  AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPV 125

Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           L +G+ +S+E  SK    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L
Sbjct: 126 LKEGERVSLE--SKPINPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVL 183

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
           + M  ++   D +++  +GERGREVREFIE  L     KK++++ A +DESP++R  A L
Sbjct: 184 MGMITQNTDADVIVVGFIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATL 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + EYF  KG +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER
Sbjct: 244 LCHRVGEYFRDKGQDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 303

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G SE + G++TA+ +VL +GD+  DP+ DS R+ILDG++VL+R LAE+G YP +D  AS
Sbjct: 304 AGNSENQDGSLTAIYTVLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINAS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR              +        + + +++  +GGY+PG D  LD+++   P +  +
Sbjct: 364 LSRCMMSCTQPTHSDTANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAY 423

Query: 417 LKQSPSDL 424
           L+Q+ +++
Sbjct: 424 LQQAANEV 431


>gi|322615101|gb|EFY12024.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619942|gb|EFY16815.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622254|gb|EFY19099.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627776|gb|EFY24566.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632879|gb|EFY29623.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636630|gb|EFY33333.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641177|gb|EFY37819.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644888|gb|EFY41421.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650276|gb|EFY46690.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655849|gb|EFY52151.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660175|gb|EFY56414.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665259|gb|EFY61447.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669516|gb|EFY65664.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673442|gb|EFY69544.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677370|gb|EFY73434.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679967|gb|EFY76006.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687439|gb|EFY83411.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194108|gb|EFZ79307.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198589|gb|EFZ83690.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202915|gb|EFZ87950.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208635|gb|EFZ93573.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211171|gb|EFZ96018.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217612|gb|EGA02327.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323218961|gb|EGA03471.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323229414|gb|EGA13537.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232637|gb|EGA16733.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240325|gb|EGA24369.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242686|gb|EGA26707.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323245897|gb|EGA29885.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252461|gb|EGA36308.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323260043|gb|EGA43668.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267193|gb|EGA50678.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
          Length = 433

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|303248343|ref|ZP_07334604.1| flagellar protein export ATPase FliI [Desulfovibrio fructosovorans
           JJ]
 gi|302490251|gb|EFL50165.1| flagellar protein export ATPase FliI [Desulfovibrio fructosovorans
           JJ]
          Length = 441

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 207/321 (64%), Gaps = 4/321 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRVI+A G PID   ++   + +  I +  P  M+R R+ +    G+R I+    L  
Sbjct: 105 YLGRVIDAFGNPIDDGAAITPANFN-PIFASAPMPMDRPRINEPMDVGVRAINGLLTLGK 163

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+ AGSG+GKSTL+ M AR+   D  +I LVGERGRE+REFIE  LG + + +SVV
Sbjct: 164 GQRVGIMAGSGVGKSTLMGMIARNTKADINVIGLVGERGRELREFIEKDLGPEGMARSVV 223

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+SP++R  A   A  +AE+F  +G +V+L++DS+TRFA + RE+   +GE P  
Sbjct: 224 VVATSDQSPLIRMRAAYAATAMAEFFRDQGGDVILMMDSVTRFAMAGREVGLAAGEPPTT 283

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGY  SVF++LP+LLER G  +  +G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL 
Sbjct: 284 RGYTPSVFAQLPKLLERAG--KNNQGSITGIYTVLVDGDDFNEPIADAVRSILDGHIVLT 341

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA++G +P +D L S+SRL       +       +  L+  +    D+  IG Y  G 
Sbjct: 342 RDLADQGHFPAIDVLKSISRLRSDVTPKEALTAGREMIRLLATYRRVEDMVNIGAYARGA 401

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +  +D+A+  +  I  FL+Q+
Sbjct: 402 NPEIDRAIDMIGPINGFLRQA 422


>gi|145301459|ref|YP_001144298.1| type III secretion system ATPase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|38201225|emb|CAD56760.1| ascN protein [Aeromonas salmonicida subsp. salmonicida]
 gi|66947962|emb|CAE83099.1| AscN protein [Aeromonas salmonicida subsp. salmonicida]
 gi|142856341|gb|ABO92550.1| AscN protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|145284342|gb|ABP51923.1| AscN [Aeromonas veronii bv. sobria]
          Length = 445

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/408 (38%), Positives = 232/408 (56%), Gaps = 20/408 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV G  I  +  +      LS    +  F  HQ   +  LG++  I+ +   + P G   
Sbjct: 44  VVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTP-LGEMFGISSN-TEVSPTGAMH 101

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ +G+ +               G+V++ LG P  G   L + +    +    P  M+R+
Sbjct: 102 QVGVGEHLL--------------GQVLDGLGNPFGGGH-LPEPEAWYPVYRDAPAPMSRK 146

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +    GIR ID       GQR+G+FA +G GKSTLL+   RS   D  +++L+GERG
Sbjct: 147 RIAEPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 206

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFIE  LG+  LKK+V+VVATSD   + R  A   A +IAEYF  +G  VLL++DS
Sbjct: 207 REVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDS 266

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S  +KG+ITA+ +VLV+GD
Sbjct: 267 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGD 324

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    + +     L  
Sbjct: 325 DMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRLRS 384

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            + ++EE   +  IG Y+ G D + D+A+ ++  I  +L+Q   + SS
Sbjct: 385 WLAKYEEVELLLQIGEYQKGQDKVADEAIARIETIRQWLRQGTHEPSS 432


>gi|124265761|ref|YP_001019765.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1]
 gi|124258536|gb|ABM93530.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1]
          Length = 487

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 201/326 (61%), Gaps = 6/326 (1%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRVI+ LG P+D    LG  G +  E + + P  AM R  V +   TG+R I+    +  
Sbjct: 150 GRVIDPLGMPLD---RLGPIGAVRNEPLVRRPINAMERDPVREPLDTGVRAINAMLTVGR 206

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQRIG+FAGSG+GKS LL M A+    D +++ L+GERGREV+EFIED LG+  LK+S+V
Sbjct: 207 GQRIGLFAGSGVGKSVLLGMMAKYTAADVIVVGLIGERGREVKEFIEDILGEEGLKRSIV 266

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D  P+ R      A  IAE+F  +G +VLL++DS+TR+A + REIA   GE P  
Sbjct: 267 VAAPADSPPLTRMQGAAYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAIGEPPAT 326

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP S F++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+
Sbjct: 327 KGYPPSCFAKLPQLVERSGNGLNGCGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLS 386

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D   S SR+       +  +    L  L  R+++ RD+  +G Y PG 
Sbjct: 387 RDLAESGHYPAIDIERSASRVMHNVARPEHLQAARRLRQLWSRYQKARDLIALGAYAPGH 446

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLS 425
           D+ LD AV Q   +   L+Q   D S
Sbjct: 447 DVELDLAVKQHDAMRTLLQQDMHDAS 472


>gi|152980499|ref|YP_001353128.1| FliI flagellum specific ATP synthase [Janthinobacterium sp.
           Marseille]
 gi|151280576|gb|ABR88986.1| FliI flagellum specific ATP synthase [Janthinobacterium sp.
           Marseille]
          Length = 448

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 198/321 (61%), Gaps = 4/321 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
             GRV++  G+P+D    L     + + + +  P  ++R  +      G+R I+    + 
Sbjct: 110 LLGRVLDGAGRPLDNLGPLNAAHAAPLNVRAANP--LSRAPITDVLDVGVRAINSMLTVG 167

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 168 RGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGAEGLARSV 227

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D  P++R      A  IAE+F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 228 VVAAPADTPPLMRLQGAAYATAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPPA 287

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G  ++  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 288 TKGYPPSVFAKLPALVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 347

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           NRSLAE G YP +D   S+SR      + + +K    L  L  R++  RD+  +G Y  G
Sbjct: 348 NRSLAEAGHYPAIDIEQSISRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSAG 407

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LD+A+     I  FL+Q
Sbjct: 408 SDPVLDEAIALNSKIESFLQQ 428


>gi|17548614|ref|NP_521954.1| flagellum-specific ATP synthase [Ralstonia solanacearum GMI1000]
 gi|17430862|emb|CAD17544.1| probable flagellum-specific atp synthase protein [Ralstonia
           solanacearum GMI1000]
          Length = 481

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/325 (43%), Positives = 201/325 (61%), Gaps = 9/325 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLC 159
           GRV++A G+P+DG   LG  +  +   S  P  +N   R+ +E+    G+R I+    + 
Sbjct: 138 GRVVDANGEPLDGKGPLGASE-ELAWGSLAPAPLNPLKRKPIERVLDVGVRAINGLLTVG 196

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S 
Sbjct: 197 QGQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSA 256

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P 
Sbjct: 257 VVAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPA 316

Query: 279 ARGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP S F++LP L+ER G     +    G+ITA  +VL +GD+  DPIAD+ R+ILDG
Sbjct: 317 TKGYPPSAFAKLPALVERAGNGMVDAAGRGGSITAFYTVLAEGDDQQDPIADAARAILDG 376

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G 
Sbjct: 377 HFVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGA 436

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D + D+A+ + P +  FL+Q
Sbjct: 437 YARGSDPVTDQAIARYPSMEGFLQQ 461


>gi|213583910|ref|ZP_03365736.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 432

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           +DG    D   K   +M      PPAM RQ + +   TGIR ID       GQR+G+F+ 
Sbjct: 109 LDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228
            G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   
Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS
Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y
Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+ 
Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAID 401

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432
             P I  FL+QS  ++   ++  E
Sbjct: 402 TYPDICTFLRQSKDEVCGPELLIE 425


>gi|168233610|ref|ZP_02658668.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194471045|ref|ZP_03077029.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|238913182|ref|ZP_04657019.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|194457409|gb|EDX46248.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205332335|gb|EDZ19099.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 433

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|269967823|ref|ZP_06181867.1| type III secretion system ATPase [Vibrio alginolyticus 40B]
 gi|269827528|gb|EEZ81818.1| type III secretion system ATPase [Vibrio alginolyticus 40B]
          Length = 458

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/358 (41%), Positives = 209/358 (58%), Gaps = 18/358 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P+G   E+ +GD +               G  ++ LG+P DG  S  +      +   
Sbjct: 106 VSPMGKMHEVGVGDHLL--------------GTTLDGLGRPFDGTQS-QEPSAWYPVYRD 150

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +
Sbjct: 151 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAEVDVTV 210

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREFIE  LG+  + KSV+VVATSD   + R  A   A +IAEYF  +G 
Sbjct: 211 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 270

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S  +KG+ITA+
Sbjct: 271 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQS--DKGSITAL 328

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    D +
Sbjct: 329 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 388

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    +   D
Sbjct: 389 ASAAHIREMLAKYEEVELLIKIGEYQHGADSRADMAIAQSDDICAFLRQGTQGIGDLD 446


>gi|283785711|ref|YP_003365576.1| flagellum-specific ATP synthase [Citrobacter rodentium ICC168]
 gi|282949165|emb|CBG88773.1| flagellum-specific ATP synthase [Citrobacter rodentium ICC168]
          Length = 456

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/369 (41%), Positives = 213/369 (57%), Gaps = 12/369 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGK 111
           +V+  N   +++ P+   E I  G  V+         H G+ ++       GRV++  GK
Sbjct: 68  EVVGFNGQRLFLMPLEEVEGILPGARVYAKNIASEGLHSGK-QLPLGPALLGRVLDGSGK 126

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG  S    +    I     P + R  +E    TG+R I+    +  GQR+G+FAGSG
Sbjct: 127 PLDGLPSPDTTETGALITQPFNP-LQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSG 185

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           +GKS LL M AR    D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+L
Sbjct: 186 VGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGADGRARSVVIAAPADVSPLL 245

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++L
Sbjct: 246 RMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 305

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP 
Sbjct: 306 PALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPA 365

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR      S      V     L+  F+  RD+  +G Y  G D +LDKA+   
Sbjct: 366 IDIEASISRAMTALISEQHYAKVRQFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALW 425

Query: 411 PIIYDFLKQ 419
           P +  FL+Q
Sbjct: 426 PQLEAFLQQ 434


>gi|254519419|ref|ZP_05131475.1| flagellar protein export ATPase FliI [Clostridium sp. 7_2_43FAA]
 gi|226913168|gb|EEH98369.1| flagellar protein export ATPase FliI [Clostridium sp. 7_2_43FAA]
          Length = 436

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/361 (42%), Positives = 220/361 (60%), Gaps = 6/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D V + P+G    IS G  V    R   +  S    G++++ LG P+ GD+ +
Sbjct: 59  EVVGFREDAVLLMPLGELIGISPGCRVVPERRPLEVRCSDDLLGKILDGLGNPLQGDEII 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 +E  ++ P  + R+R+ +   TG+R ID F  +  GQRIG+FAGSG+GKST L 
Sbjct: 119 QGEGYPLE--NQPPDPLTRRRITEILPTGVRAIDGFLTVGEGQRIGIFAGSGVGKSTTLG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +ISL+GERGREV EFIE  LG + +KKS+VV ATSD+  ++R    LTA
Sbjct: 177 MIAREAEADINVISLIGERGREVLEFIEKDLGPEGMKKSIVVCATSDKPALIRIKGALTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +GY  SVF++LP+L+ER  
Sbjct: 237 TAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPAQKGYTPSVFAKLPKLMER-- 294

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P   +KG+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D L S+S
Sbjct: 295 PGTSDKGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRDLAHKNHYPAIDILNSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL     +   K+  S    L+  +++  D+  +G Y  G +  +D ++     +  +LK
Sbjct: 355 RLMPSIATDIHKEASSMGRDLLATYKDAEDLINLGAYVKGSNKKIDLSIQYNDRLNSYLK 414

Query: 419 Q 419
           Q
Sbjct: 415 Q 415


>gi|257866381|ref|ZP_05646034.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC30]
 gi|257873103|ref|ZP_05652756.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC10]
 gi|257875994|ref|ZP_05655647.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC20]
 gi|257800339|gb|EEV29367.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC30]
 gi|257807267|gb|EEV36089.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC10]
 gi|257810160|gb|EEV38980.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC20]
          Length = 450

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 158/398 (39%), Positives = 228/398 (57%), Gaps = 5/398 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S +  +   V  L+ ++     V  Q K    L +V+      V + P+   E I  
Sbjct: 24  GKVSEVVGLLIKVEGLAVFIGEICEVALQNKTHTALAEVVGFVKKTVLLMPLDQLEGIGP 83

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G LV   G+   +       G  ++ LG+P+D    L        +    P    RQ++ 
Sbjct: 84  GCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMALELESAP-EYPVSQDSPDPFRRQKIA 142

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TG+R ID    +  GQRIG+FAGSG+GKSTLL M AR    D ++I L+GERGREV
Sbjct: 143 EIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTLLGMLARYCEADVIVIGLIGERGREV 202

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           +EFIE+ LG +  +KSVVV ATSD  P++R      A  IAEY+  +G  V+L++DS+TR
Sbjct: 203 KEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAHVATAIAEYYRDQGKKVVLMMDSVTR 262

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + REI  ++GE P  +GY  SVF+ LP+LLER G S  +KG+ITA  +VLV+GD+ N
Sbjct: 263 FAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLERSGMS--DKGSITAFYTVLVEGDDMN 320

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD+VR ILDGHI+L+R +A +  YP +D   S+SRL     S ++ K    L   + 
Sbjct: 321 EPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNSLSRLMKTLVSEEQHKHAGELKENMA 380

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + E +D+  IG Y+ G + + D+A+     I  FL+Q
Sbjct: 381 VYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRFLQQ 418


>gi|16760496|ref|NP_456113.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141744|ref|NP_805086.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213162226|ref|ZP_03347936.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426019|ref|ZP_03358769.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213854188|ref|ZP_03382720.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25290469|pir||AE0697 H+-transporting two-sector ATPase (EC 3.6.3.14) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16502792|emb|CAD01950.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137372|gb|AAO68935.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 433

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           +DG    D   K   +M      PPAM RQ + +   TGIR ID       GQR+G+F+ 
Sbjct: 109 LDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228
            G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   
Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS
Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y
Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+ 
Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAID 401

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432
             P I  FL+QS  ++   ++  E
Sbjct: 402 TYPDICTFLRQSKDEVCGPELLIE 425


>gi|167770215|ref|ZP_02442268.1| hypothetical protein ANACOL_01558 [Anaerotruncus colihominis DSM
           17241]
 gi|167667537|gb|EDS11667.1| hypothetical protein ANACOL_01558 [Anaerotruncus colihominis DSM
           17241]
          Length = 434

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/387 (40%), Positives = 229/387 (59%), Gaps = 9/387 (2%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           VTC    VC     +    N+  L + + +  + V + P      I  G +V   G+   
Sbjct: 36  VTCNIGDVC----NIQIDANNSILAEAVGLKGNSVQLMPYQDVTGIGFGSVVIPTGQSLT 91

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +  S    GR ++A+G PIDG  +   G+ S  I       M+R  +    + GI+ ID 
Sbjct: 92  LRMSDELIGRTVDAMGNPIDGGPAFQSGE-SYSINGTYSNPMDRPPITDVIEIGIKAIDG 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+LVGERGREV EFI   LG + 
Sbjct: 151 LLTIGKGQRMGIFAGSGVGKSTLMGMIARNIKADVNVIALVGERGREVVEFINRDLGPEG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           +K+SV+VVATSD   ++R    LTA  IAEYF  +G +VLL++DS+TRF  + REI  + 
Sbjct: 211 VKRSVLVVATSDTPAMMRSKCALTATAIAEYFRDQGKDVLLMMDSLTRFCMAQREIGLSV 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE PVARGY  S++S LP+LLER G    E G+IT + +VLV+GD+ N+PI+D+VR I+D
Sbjct: 271 GEPPVARGYTPSIYSALPKLLERSG--NFEHGSITGIYTVLVEGDDTNEPISDTVRGIVD 328

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R +A +  YP +D LAS+SRL     + +       L  ++  ++E +D+  IG
Sbjct: 329 GHIVLSRKVAMKNHYPAIDVLASISRLMAGIATPEHNFAAGRLRAMLSIYQENQDLISIG 388

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
            Y+ G +  LD+A+  +  I   L+Q+
Sbjct: 389 AYKGGSNPELDEAMRHIDQINKLLQQA 415


>gi|308048755|ref|YP_003912321.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
 gi|307630945|gb|ADN75247.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
          Length = 446

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/368 (40%), Positives = 218/368 (59%), Gaps = 3/368 (0%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPI 113
           N     +V+  +  ++Y+ PV   + +  G  V   G+ +  P      GRV++  G+P+
Sbjct: 57  NGQLTAEVVGFDDQVLYLMPVEELKGVLPGARVTPMGQRQGLPVGPELLGRVLDGNGEPL 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   L   + +    + + P M R+ + +    G+R I+    +  GQR+G+FAGSG+G
Sbjct: 117 DGLGPLATRERAPHHATLLNP-MARRPIHQPIDVGVRTINAMLTVGEGQRMGLFAGSGVG 175

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           KS LL M  R    D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R 
Sbjct: 176 KSVLLGMMTRGTNADVIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRL 235

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE+F  +G NVLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP+
Sbjct: 236 RACETATRIAEHFRDQGRNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFARLPQ 295

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE G YP +D
Sbjct: 296 LVERAGNGGVGQGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRALAESGHYPAID 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+          +    +  L   + + +D+  IG Y  G D  +DKA+   P 
Sbjct: 356 IEASISRVMPMVTEPLHLEAAQLIKQLWSAYRQNQDLIAIGAYSAGSDPQVDKAIAMQPA 415

Query: 413 IYDFLKQS 420
              FL+Q+
Sbjct: 416 FNAFLRQA 423


>gi|294140206|ref|YP_003556184.1| flagellum-specific ATP synthase FliI [Shewanella violacea DSS12]
 gi|293326675|dbj|BAJ01406.1| flagellum-specific ATP synthase FliI [Shewanella violacea DSS12]
          Length = 446

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/371 (40%), Positives = 227/371 (61%), Gaps = 15/371 (4%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
           D + +VI  + +I+Y+ P+     +  G  V   G +  ++      GRV++  G+P+D 
Sbjct: 59  DLVAEVIGFDDNILYLMPIEELRGVLPGAKVTPLGEQTGLNVGLSLLGRVLDGNGQPLD- 117

Query: 116 DDSLGKGDLSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
             +LG+    ++   K P   P +N   R+ + +    G+R I+    +  GQR+G+FAG
Sbjct: 118 --NLGR----LQTDQKAPRHSPTINPLARRAITEPLDVGVRAINAMLTVGKGQRMGLFAG 171

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
           SG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG+  + +SVVV A +D SP
Sbjct: 172 SGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSP 231

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           ++R  A  T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF+
Sbjct: 232 LMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFA 291

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +LP+L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G Y
Sbjct: 292 KLPKLVERAGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHY 351

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  AS+SR+A    S +  + +  +  +   F++ +D+  IG Y  G D  +D A+ 
Sbjct: 352 PAIDVEASISRVAPMVISTEHLESMRRVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIR 411

Query: 409 QVPIIYDFLKQ 419
             P +  FL+Q
Sbjct: 412 LQPAMNAFLRQ 422


>gi|168263753|ref|ZP_02685726.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|205347555|gb|EDZ34186.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
          Length = 433

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           +DG    D   K   +M      PPAM RQ + +   TGIR ID       GQR+G+F+ 
Sbjct: 109 LDGRALPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228
            G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   
Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS
Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y
Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+ 
Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAID 401

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432
             P I  FL+QS  ++   ++  E
Sbjct: 402 AYPDICTFLRQSKDEVCGPELLIE 425


>gi|78224301|ref|YP_386048.1| ATPase FliI/YscN [Geobacter metallireducens GS-15]
 gi|78195556|gb|ABB33323.1| type III secretion system ATPase, FliI/YscN [Geobacter
           metallireducens GS-15]
          Length = 443

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/354 (42%), Positives = 213/354 (60%), Gaps = 5/354 (1%)

Query: 72  ICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+G    + LG L+     +  +       GRVI+ LG+PID    L   +      +
Sbjct: 72  LMPLGELRGVGLGSLISVKRKKSSLGVGPGLLGRVIDGLGEPIDDKGPLATREEYPIYAN 131

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
            V P M R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  
Sbjct: 132 PVNP-MKRRPIREPLDLGIRAINGLLTCGKGQRVGIMAGSGVGKSTLLGMIARYTEADVN 190

Query: 191 IISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGRE+REFIE D   + LKKSVVVVATSD+ P++R      A TIAEYF ++G
Sbjct: 191 VIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQG 250

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VLL++DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G      G+IT 
Sbjct: 251 KKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTG--NFMDGSITG 308

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ N+P++D++RSILDGHIVLNR LA    YPP+D LAS SR+        +
Sbjct: 309 LYTVLVEGDDFNEPVSDAMRSILDGHIVLNRELAARAIYPPIDVLASASRVMMDVTERGQ 368

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           ++  S    L+   ++  D+  IG Y+PG +  +D A+ ++  +  +++Q   D
Sbjct: 369 QQFASRFKELLAAHKQAEDLINIGAYKPGSNPTIDYAISKMEGMVGYIRQGIHD 422


>gi|261419422|ref|YP_003253104.1| flagellum-specific ATP synthase [Geobacillus sp. Y412MC61]
 gi|319766237|ref|YP_004131738.1| ATPase, FliI/YscN family [Geobacillus sp. Y412MC52]
 gi|261375879|gb|ACX78622.1| flagellar protein export ATPase FliI [Geobacillus sp. Y412MC61]
 gi|317111103|gb|ADU93595.1| ATPase, FliI/YscN family [Geobacillus sp. Y412MC52]
          Length = 422

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/363 (41%), Positives = 215/363 (59%), Gaps = 5/363 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  +   V + P      I+ G LV   GR   +       G V++ LG+P+DG   
Sbjct: 42  AEVVGFHEQHVLLMPFSATTHIAPGCLVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-P 100

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G   + +    P  + R  + +  + GIRVID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 101 LPPGLKPVSVERDPPNPLVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLM 160

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREVREF+E  LG D L +SVVVVATSD+  ++R     T
Sbjct: 161 GMIARHTSADVNVIALIGERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYT 220

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V+L++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER 
Sbjct: 221 ATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERA 280

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G ITA  +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SV
Sbjct: 281 G--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSV 338

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+     SA+ ++  +    L+  + ++ D+  IG Y+ G    +D+A+   P +  F 
Sbjct: 339 SRVMPHMISAEHREAANRFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFC 398

Query: 418 KQS 420
           +Q+
Sbjct: 399 RQN 401


>gi|220917661|ref|YP_002492965.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955515|gb|ACL65899.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 452

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/336 (43%), Positives = 208/336 (61%), Gaps = 13/336 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSM-----EIMSKVPPAMNRQRVEKGFKTG 148
           RI+      GRV++A  +P+DG      G + M      + +  PPA++R+RVE+    G
Sbjct: 93  RIAVGEALLGRVVDASLRPVDG------GAVPMLRQRTALHASPPPALSRRRVERAVPLG 146

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           IR ID    +  GQRI V AG G+GKS LL M ARS   D V++ L+GERGREVREF+E 
Sbjct: 147 IRAIDACLTVGEGQRIAVMAGPGVGKSVLLGMLARSATADVVVVGLIGERGREVREFVER 206

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
            LG  L ++VVVVATSD SP+ R  A + A   AE+F  +G  VLL++DS++R A + RE
Sbjct: 207 DLGPGLARAVVVVATSDASPLERLRAAMAATAAAEWFRGRGRRVLLLVDSLSRVAQAQRE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH-NDPIADS 327
           I   +GE P  RGYP S F+ LPRL+ER G ++   G+ITA  +VL +GD+H  DPIAD+
Sbjct: 267 IGLAAGEPPTTRGYPPSAFAILPRLVERAG-NDAGPGSITAFYTVLAEGDDHAGDPIADA 325

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            R+ LDGH+VL+R LAE G +P +D LASVSR+ +    A+ + L      ++    E  
Sbjct: 326 ARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPAEHRALAREAREVLSAHREAA 385

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           D+  +G Y  G +  +D+A+  +  +  FL+Q P++
Sbjct: 386 DLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAE 421


>gi|257095341|ref|YP_003168982.1| flagellar protein export ATPase FliI [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047865|gb|ACV37053.1| flagellar protein export ATPase FliI [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 472

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 204/328 (62%), Gaps = 5/328 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P+D    L    L   + S+    M+R  ++K    G+R I+    +  GQ
Sbjct: 133 GRVLDGAGRPLDKLGPLHARSLR-PLQSRPVNPMSRAPIDKALDVGVRAINGLLCVGQGQ 191

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    + +++ L+GERGREV+EFIE  LG+  L++SVV+ 
Sbjct: 192 RMGLFAGSGVGKSVLLGMMARYTEAEIIVVGLIGERGREVKEFIEQILGEEGLRRSVVIA 251

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R      A  IAEYF  +G +VLLI+DS+TR+A + REIA   GE PV RG
Sbjct: 252 APADVSPLMRLQGAAYATCIAEYFRDRGRHVLLIMDSLTRYAMAQREIALAIGEPPVTRG 311

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP+L+ER G      G+IT   +VL +GD+  DPIAD+ R+ILDGHIVL+R+
Sbjct: 312 YPPSVFARLPQLVERAGNGADGGGSITGFYTVLAEGDDQQDPIADAARAILDGHIVLSRT 371

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D   S+SR      S    + + +   L  R++ +RD+  +G Y  G D 
Sbjct: 372 LADAGHYPAIDIEQSISRAMVNLVSPGHLEQIRNFKRLFSRYQRSRDLISVGAYAAGSDP 431

Query: 402 ILDKAVHQVPIIYDFLKQS---PSDLSS 426
            LD+A+   P    FL+QS   P+D +S
Sbjct: 432 QLDQAIAIYPRFESFLQQSLAQPADFAS 459


>gi|118588293|ref|ZP_01545702.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614]
 gi|118438999|gb|EAV45631.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614]
          Length = 281

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 129/277 (46%), Positives = 193/277 (69%), Gaps = 2/277 (0%)

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
           +G+FAGSG+GKS L+SM AR+   D  +I L+GERGREV+EFIED LG+  L++SVVVVA
Sbjct: 1   MGIFAGSGVGKSVLMSMLARNTKCDVAVIGLIGERGREVQEFIEDDLGEAGLERSVVVVA 60

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSDES ++R+ A    +T+AE+F  +G NVL ++DS+TRFA + REI  + GE P ++GY
Sbjct: 61  TSDESVLMRRQAAYLTMTVAEHFRDEGKNVLCMMDSVTRFAMAQREIGLSIGEPPTSKGY 120

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             +VF+ELPRLLER GP ++  G+IT + +VLV+GDNHN+P+AD+VR ILDGH+V+ R +
Sbjct: 121 TPTVFTELPRLLERAGPGKENSGSITGLFTVLVEGDNHNEPVADAVRGILDGHVVMERGI 180

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE GRYP ++ L SVSR   +    ++  ++     L+  + +  ++  +G YR G D  
Sbjct: 181 AERGRYPAINVLKSVSRTMPRCVPPEQLPVLRRARQLLSTYTDMEELIRLGAYRKGSDPT 240

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           +D+A+++  +I DFL Q   + +S  D + ++   L+
Sbjct: 241 VDEAIYRFDMIDDFLNQGKDEATSLSDGYAQLANLLE 277


>gi|76818377|ref|YP_335581.1| type III secretion system ATPase [Burkholderia pseudomallei 1710b]
 gi|134282518|ref|ZP_01769222.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
 gi|167724011|ref|ZP_02407247.1| type III secretion system ATPase [Burkholderia pseudomallei DM98]
 gi|237507405|ref|ZP_04520120.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|254194270|ref|ZP_04900702.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|254262322|ref|ZP_04953187.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
 gi|14719869|gb|AAK73233.1| SctN [Burkholderia pseudomallei]
 gi|76582850|gb|ABA52324.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710b]
 gi|134246075|gb|EBA46165.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
 gi|169651021|gb|EDS83714.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|234999610|gb|EEP49034.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|254213324|gb|EET02709.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
          Length = 449

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 29  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG+P+DG   L    L   +++  P  M
Sbjct: 87  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++ +
Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436


>gi|56419757|ref|YP_147075.1| flagellum-specific ATP synthase [Geobacillus kaustophilus HTA426]
 gi|56379599|dbj|BAD75507.1| flagellar-specific ATP synthase [Geobacillus kaustophilus HTA426]
          Length = 422

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/363 (41%), Positives = 215/363 (59%), Gaps = 5/363 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  +   V + P      I+ G LV   GR   +       G V++ LG+P+DG   
Sbjct: 42  AEVVGFHEQHVLLMPFSAMSHIAPGCLVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-P 100

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G   + +    P  + R  + +  + GIRVID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 101 LPPGLKPVSVERDPPNPLVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLM 160

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREVREF+E  LG D L +SVVVVATSD+  ++R     T
Sbjct: 161 GMIARHTSADVNVIALIGERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYT 220

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V+L++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER 
Sbjct: 221 ATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERA 280

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G ITA  +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SV
Sbjct: 281 G--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSV 338

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+     SA+ ++  +    L+  + ++ D+  IG Y+ G    +D+A+   P +  F 
Sbjct: 339 SRVMPHMISAEHREAANRFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFC 398

Query: 418 KQS 420
           +Q+
Sbjct: 399 RQN 401


>gi|53722421|ref|YP_111406.1| type III secretion system ATPase [Burkholderia pseudomallei K96243]
 gi|52212835|emb|CAH38869.1| putative type III secretion associated protein [Burkholderia
           pseudomallei K96243]
          Length = 449

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 29  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG+P+DG   L    L   +++  P  M
Sbjct: 87  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++ +
Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436


>gi|317048602|ref|YP_004116250.1| flagellar protein export ATPase FliI [Pantoea sp. At-9b]
 gi|316950219|gb|ADU69694.1| flagellar protein export ATPase FliI [Pantoea sp. At-9b]
          Length = 453

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 2/326 (0%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV++  GKP+DG  S   G  +  I +   P + R  +E    TG+R I+    +  GQR
Sbjct: 118 RVLDGSGKPLDGLPSPDTGYRAPLITAPFNP-LQRTPIEDVLDTGVRAINALLTVGRGQR 176

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222
           +G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE+ LG +   +SVV+ A
Sbjct: 177 MGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIENILGAEGRARSVVIAA 236

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GY
Sbjct: 237 PADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R L
Sbjct: 297 PPSVFAKLPALVERAGNGTHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRL 356

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +
Sbjct: 357 AEAGHYPAIDIEASISRAMTALIDENHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDPM 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSED 428
           LD+A+   P +  FL+Q   + S  D
Sbjct: 417 LDRAIKLYPQMEAFLQQGIFERSDYD 442


>gi|256370958|ref|YP_003108782.1| ATPase, FliI/YscN family [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007542|gb|ACU53109.1| ATPase, FliI/YscN family [Acidimicrobium ferrooxidans DSM 10331]
          Length = 436

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/409 (40%), Positives = 241/409 (58%), Gaps = 10/409 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V+ G +S I  ++  V  +     +G+ V +  G     + +V+    + +   P+    
Sbjct: 17  VRQGRVSRIVGIHLEVEGVE--AGIGEAVRIELGGGQSLVAEVVGFEGERLVCMPLREVR 74

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMN 137
            +  GD      R  +I       GRVI+A G PIDG   +   D+  +E+ + +P  M 
Sbjct: 75  GVRYGDRAVALRRATQIPVGRALLGRVIDADGVPIDGQGPVEPDDVVGLELAAPMP--ME 132

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  +++    G+RV+D   P   GQR+GVFAG+G+GKS+LLSM  R    D  +++LVGE
Sbjct: 133 RTLIDEQLGLGVRVLDTMVPCGVGQRLGVFAGAGVGKSSLLSMVVRGADVDVRVVALVGE 192

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREF+E  LG + + +SVVVVATSDE P++R  A + A  IAE+F + G  VLL++
Sbjct: 193 RGREVREFLEHDLGPEGMARSVVVVATSDEPPLVRVRAAIAATRIAEWFRASGARVLLVM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + RE+  ++GE P  RGYP SVF  + +LLER G      G+IT + SVLV+
Sbjct: 253 DSLTRLALAQRELGLSAGEPPSVRGYPPSVFRLMAQLLERAG--TDHVGSITGIYSVLVE 310

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD+ RS+LDGHIVL+R LA  GRYP VD LAS+SRL       D ++L+ + 
Sbjct: 311 GDDLDDPIADAARSVLDGHIVLSRQLANRGRYPAVDVLASLSRLESSILPDDRRRLMQAA 370

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              +   +E RD+  +G Y+ G  + +D+A+  VP I     Q  S+ S
Sbjct: 371 RRHLAVLDEVRDLVDLGAYQAGTSMEVDEALEVVPRIETVFGQDISERS 419


>gi|261341507|ref|ZP_05969365.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316304|gb|EFC55242.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
          Length = 439

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/385 (38%), Positives = 223/385 (57%), Gaps = 5/385 (1%)

Query: 38  CLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-I 95
           C+   + +G     +G   + +  QV+  + D+ ++ P      +  G  VF   +   +
Sbjct: 35  CVGCRLAVGQLCQVEGGEGELIDAQVVGFDRDVTFLMPFKQPAGLMAGARVFPMDKQHGV 94

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                W GRV+N LG+PID    L    +  + + +V P + RQ V +    G+R I+  
Sbjct: 95  LIGDQWLGRVVNGLGEPIDDKGKLTGDTVLPQQLPQVHP-LKRQPVAEPLDVGVRAINGL 153

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214
             +  GQR+G+ AGSG+GKS LL M  R    + V++ L+GERGREV+EFI+  LG+   
Sbjct: 154 LTIGKGQRVGLMAGSGVGKSVLLGMITRYTQAEVVVVGLIGERGREVKEFIDHSLGEAGR 213

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           +KSV+V A +DESP++R  A     TIA Y+  KG +VLL++DS+TR+A + REIA + G
Sbjct: 214 RKSVIVAAPADESPLMRIKATELCHTIASYYRDKGKDVLLLVDSLTRYAMAQREIALSLG 273

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  +GYP S F  +P+L+E  G SE   G++TA+ +VL +GD+  DPI D  R++LDG
Sbjct: 274 EPPATKGYPPSAFGLIPKLVESAGNSES-LGSMTAIYTVLAEGDDQQDPIVDCARAVLDG 332

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+R LAE G YP +D   S+SR   +    D ++   +L  L   ++  + +  +GG
Sbjct: 333 HIVLSRHLAEAGHYPAIDIGQSISRCMSQVTEQDHQRAARTLKQLYAEYQSIKPLIPLGG 392

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D + D+AV+  P I  FL+Q
Sbjct: 393 YVAGADPVADRAVNLSPAITRFLQQ 417


>gi|226944509|ref|YP_002799582.1| flagellum-specific ATPase [Azotobacter vinelandii DJ]
 gi|226719436|gb|ACO78607.1| Flagellum-specific ATPase [Azotobacter vinelandii DJ]
          Length = 459

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 202/321 (62%), Gaps = 6/321 (1%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV+++ G+P+DG   LG  D         PP   ++R  +++    GIR I+    + 
Sbjct: 120 LGRVVDSSGQPLDG---LGPLDGVHHASLHTPPLNPLHRAPIDRQIDVGIRAINGLLSVG 176

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FI++ LG + L++SV
Sbjct: 177 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVQDFIDNILGAEGLRRSV 236

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+ R      A  +AE F   G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 237 VVAAPADNSPLQRLQGAAYATRLAEDFRDAGRDVLLIMDSLTRYAMAQREIALAIGEPPA 296

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LPRL+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 297 TKGYPPSVFAKLPRLVERTGNGPRGGGSITAFYTVLSEGDDQQDPIADSARAILDGHIVL 356

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+LAE G YP +D  AS+SR         +++        + R++  RD+  +G Y PG
Sbjct: 357 SRALAESGHYPAIDIEASISRAMTAIVDDAQQRKAQQFKQSLSRYQRNRDLISVGAYAPG 416

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D  LD+AV+  P +  FL+Q
Sbjct: 417 HDPQLDRAVNLYPQLERFLQQ 437


>gi|331007044|ref|ZP_08330276.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC1989]
 gi|330419146|gb|EGG93580.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC1989]
          Length = 459

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/332 (44%), Positives = 207/332 (62%), Gaps = 7/332 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRVI+ LG+PID   S+   DL    S E  +++ P + R  + +    GIR I+   P+
Sbjct: 108 GRVIDGLGQPIDDLGSIPNDDLAPIKSAE-QTRINP-LQRAPIVEVLDVGIRAINALIPV 165

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
             GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV+EFIE  LG+  LK++
Sbjct: 166 GKGQRLGLFAGSGVGKSVLLGMMTRFTTADVVVVGLIGERGREVKEFIEHSLGEEGLKRA 225

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV + +DESP++R  A   A  IAEY+  +G +VLL++DS+TR+A + REIA   GE P
Sbjct: 226 VVVASPADESPLMRLRASQLASQIAEYYRDQGKDVLLLMDSLTRYAQAQREIALAIGEPP 285

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP+L+ER G  +   G+ITA  +VL +GD+  DPIADS R+ILDGH+V
Sbjct: 286 ATKGYPPSVFAKLPQLVERAGNGKVGSGSITAFYTVLTEGDDLQDPIADSARAILDGHVV 345

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R LAE G YP +D   S+SR+          K +     L+  + + RD+  IG Y  
Sbjct: 346 LSRQLAESGIYPAIDVEMSISRVMTSIVDKTHIKWLQRFKQLLANYYKNRDLINIGAYIK 405

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           G D  +D A+   P +  F++Q  SD    DV
Sbjct: 406 GSDNEVDLALEYFPRLQQFIQQDISDAVYCDV 437


>gi|307638075|gb|ADN80525.1| Flagellum-specific ATP synthase [Helicobacter pylori 908]
 gi|317014791|gb|ADU82227.1| flagellum-specific ATP synthase [Helicobacter pylori Gambia94/24]
 gi|325996678|gb|ADZ52083.1| Flagellum-specific ATP synthase [Helicobacter pylori 2018]
 gi|325998269|gb|ADZ50477.1| Flagellum-specific ATP synthase [Helicobacter pylori 2017]
          Length = 434

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   S+ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFVEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLASIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|126442369|ref|YP_001062985.1| type III secretion system ATPase [Burkholderia pseudomallei 668]
 gi|167898593|ref|ZP_02485994.1| type III secretion system ATPase [Burkholderia pseudomallei 7894]
 gi|167906935|ref|ZP_02494140.1| type III secretion system ATPase [Burkholderia pseudomallei NCTC
           13177]
 gi|167923128|ref|ZP_02510219.1| type III secretion system ATPase [Burkholderia pseudomallei BCC215]
 gi|254183794|ref|ZP_04890386.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
 gi|254186709|ref|ZP_04893225.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|126221860|gb|ABN85365.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 668]
 gi|157934393|gb|EDO90063.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|184214327|gb|EDU11370.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
          Length = 443

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 23  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 80

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG+P+DG   L    L   +++  P  M
Sbjct: 81  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 139

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 140 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 199

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 200 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 259

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 260 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 317

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 318 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 377

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++ +
Sbjct: 378 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 430


>gi|226199117|ref|ZP_03794679.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
 gi|225928892|gb|EEH24917.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
          Length = 443

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 23  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 80

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG+P+DG   L    L   +++  P  M
Sbjct: 81  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 139

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 140 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 199

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 200 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 259

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 260 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 317

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 318 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 377

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++ +
Sbjct: 378 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 430


>gi|198243404|ref|YP_002215717.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197937920|gb|ACH75253.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 443

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 219/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 59  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 118

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 119 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 176

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 177 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 237 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 296

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 297 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 354

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  + E   +  IG Y+ GVD   DKA+   P
Sbjct: 355 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYLEVELLIRIGEYQRGVDTDTDKAIDTYP 414

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 415 DICTFLRQSKDEVCGPELLIE 435


>gi|309779489|ref|ZP_07674250.1| flagellar protein export ATPase FliI [Ralstonia sp. 5_7_47FAA]
 gi|308921730|gb|EFP67366.1| flagellar protein export ATPase FliI [Ralstonia sp. 5_7_47FAA]
          Length = 486

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G+P+DG   LG   DL+   ++  P   + R+ +E     G+R I+    +  
Sbjct: 143 GRVVDANGEPLDGKGPLGAHEDLAWGTLNPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 202

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S V
Sbjct: 203 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 262

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  
Sbjct: 263 VAAPADTSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 322

Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP S F++LP L+ER G     +    G+ITA  +VL +GD+  DPIAD+ R+ILDGH
Sbjct: 323 KGYPPSAFAKLPALVERAGNGMVDANGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 382

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y
Sbjct: 383 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDTARRFKQLYARYQRNRDLIAVGAY 442

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D + D+A+ + P +  FL+Q
Sbjct: 443 ARGSDPVTDQAIARYPDMEAFLQQ 466


>gi|299068780|emb|CBJ40020.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum CMR15]
          Length = 481

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G+P+DG   LG  + L+   ++  P   + R+ +E     G+R I+    +  
Sbjct: 138 GRVVDANGEPLDGKGPLGASEELAWGTLAPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S V
Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  
Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317

Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP S F++LP L+ER G     +    G+ITA  +VL +GD+  DPIAD+ R+ILDGH
Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDAAGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y
Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGAY 437

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D + D+A+ + P +  FL+Q
Sbjct: 438 ARGSDPVTDQAIARYPSMEGFLQQ 461


>gi|332531126|ref|ZP_08407040.1| ATPase FliI/YscN [Hylemonella gracilis ATCC 19624]
 gi|332039411|gb|EGI75823.1| ATPase FliI/YscN [Hylemonella gracilis ATCC 19624]
          Length = 535

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/346 (42%), Positives = 210/346 (60%), Gaps = 12/346 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149
           G+ R+       GRV++A G+P+D    L   ++    + + P  AM+R  V +   TG+
Sbjct: 152 GQLRLPLGEGLLGRVVDAQGQPMDHRGPLS--NVVSRPLDRSPLNAMDRAPVREPLDTGV 209

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           R I+    +  GQR+G+FAG+G+GKS LL M AR    + +++ LVGERGREV+EFIED 
Sbjct: 210 RSINALLTVGRGQRLGLFAGAGVGKSVLLGMMARYTEAEIIVVGLVGERGREVKEFIEDI 269

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG+   ++SVVV A +D  P+LR  A   A  +AEYF  +G +VLL++DS+TR+A + RE
Sbjct: 270 LGEEGRRRSVVVAAPADAPPLLRLQAAGYATGVAEYFRDQGKHVLLLMDSLTRYAMAQRE 329

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA   GE P  +GYP S F++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ 
Sbjct: 330 IALAVGEPPATKGYPPSCFAKLPQLVERSGNGLNGVGSITAFYTVLAEGDDQQDPIADAA 389

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL R+LAE G YP +D   S SR+     S +  +L      +  R+E  RD
Sbjct: 390 RAILDGHIVLTRALAEAGHYPAIDIAQSASRVMHNVVSKEHFELARQFRGISSRYERGRD 449

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +  IG Y PG D  LD+++     +  FL+Q        D++Q +T
Sbjct: 450 LIQIGAYVPGADPGLDESIRLHEPMMAFLQQ--------DMYQGVT 487


>gi|315617528|gb|EFU98134.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 3431]
          Length = 439

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/379 (40%), Positives = 218/379 (57%), Gaps = 8/379 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +VI IN D V++ P      +  G  + + G  F+I       GR+++ +G+P+  + 
Sbjct: 60  LAEVIAINEDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                     + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GKSTL
Sbjct: 120 DALYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           L M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A  T
Sbjct: 180 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 239

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LLER 
Sbjct: 240 ATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 299

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D   S 
Sbjct: 300 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+     I  F+
Sbjct: 358 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFI 417

Query: 418 KQSPSDLSS-----EDVFQ 431
           +QS  D+SS     E++F+
Sbjct: 418 QQSTKDISSYEKTIENLFK 436


>gi|326623464|gb|EGE29809.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 428

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/381 (41%), Positives = 219/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 44  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 103

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 104 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 161

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 162 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 221

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 222 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 281

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 282 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 339

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  + E   +  IG Y+ GVD   DKA+   P
Sbjct: 340 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYLEVELLIRIGEYQRGVDTDTDKAIDTYP 399

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 400 DICTFLRQSKDEVCGPELLIE 420


>gi|170767133|ref|ZP_02901586.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia albertii TW07627]
 gi|170124571|gb|EDS93502.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia albertii TW07627]
          Length = 446

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/379 (40%), Positives = 218/379 (57%), Gaps = 8/379 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +VI IN D V++ P      +  G  + + G  F+I       GR+++ +G+P+  + 
Sbjct: 67  LAEVIAINEDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 126

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                     + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GKSTL
Sbjct: 127 DALYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 186

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           L M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A  T
Sbjct: 187 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 246

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LLER 
Sbjct: 247 ATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 306

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D   S 
Sbjct: 307 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+     I  F+
Sbjct: 365 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTVGQDPEADKAIKNRKAIQSFI 424

Query: 418 KQSPSDLSS-----EDVFQ 431
           +QS  D+SS     E++F+
Sbjct: 425 QQSTKDISSYEKTIENLFK 443


>gi|168822285|ref|ZP_02834285.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205341351|gb|EDZ28115.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
          Length = 433

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/381 (41%), Positives = 219/381 (57%), Gaps = 6/381 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A TI E+F   G  V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LP
Sbjct: 227 VRALFVATTITEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP +
Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD   DKA+   P
Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDAYP 404

Query: 412 IIYDFLKQSPSDLSSEDVFQE 432
            I  FL+QS  ++   ++  E
Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425


>gi|197122869|ref|YP_002134820.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
 gi|196172718|gb|ACG73691.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
          Length = 452

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/336 (43%), Positives = 208/336 (61%), Gaps = 13/336 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSM-----EIMSKVPPAMNRQRVEKGFKTG 148
           RI+      GRV++A  +P+DG      G + M      + +  PPA++R+RVE+    G
Sbjct: 93  RIAVGEALLGRVVDASLRPVDG------GAVPMLRQRTALHASPPPALSRRRVERAVPLG 146

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           IR +D    +  GQRI V AG G+GKS LL M ARS   D V++ L+GERGREVREF+E 
Sbjct: 147 IRAVDACLTVGEGQRIAVMAGPGVGKSVLLGMLARSATADVVVVGLIGERGREVREFVER 206

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
            LG  L ++VVVVATSD SP+ R  A + A   AE+F  +G  VLL++DS++R A + RE
Sbjct: 207 DLGPGLARAVVVVATSDASPLERLRAAMAATAAAEWFRGRGRRVLLLVDSLSRVAQAQRE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH-NDPIADS 327
           I   +GE P  RGYP S F+ LPRL+ER G ++   G+ITA  +VL +GD+H  DPIAD+
Sbjct: 267 IGLAAGEPPTTRGYPPSAFAILPRLVERAG-NDAGPGSITAFYTVLAEGDDHAGDPIADA 325

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            R+ LDGH+VL+R LAE G +P +D LASVSR+ +    A+ + L      ++    E  
Sbjct: 326 ARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPAEHRALAREAREVLSAHREAA 385

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           D+  +G Y  G +  +D+A+  +  +  FL+Q P++
Sbjct: 386 DLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAE 421


>gi|94264096|ref|ZP_01287895.1| ATPase FliI/YscN [delta proteobacterium MLMS-1]
 gi|93455512|gb|EAT05702.1| ATPase FliI/YscN [delta proteobacterium MLMS-1]
          Length = 437

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/352 (40%), Positives = 218/352 (61%), Gaps = 4/352 (1%)

Query: 70  VYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    +  G  +    G+ R++ S    GR+I+ LG+P+DG   L  G+    +
Sbjct: 66  VLLMPLGEMRGVEPGSAIRLAEGQARVTVSQALLGRIIDGLGQPMDGGPPL-PGEAFYPL 124

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++    M R+R+++    G+R I+    L  GQRIG+ AGSG+GKSTL+ M AR    D
Sbjct: 125 YAEPLNPMERERIQEPVDVGVRSINGLLTLGKGQRIGIMAGSGVGKSTLMGMIARHTAAD 184

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGRE+++FIE  LG + L +SVV+VATSD+ P++R      A+ +AEYF  
Sbjct: 185 ISVIALIGERGRELKDFIERDLGPEGLARSVVIVATSDQPPLVRMRGAYLAMAVAEYFRD 244

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +V+L++DS+TR+A S RE+    GE P +RGY  SVF +LP+LLER G  +  KG+I
Sbjct: 245 HDRDVVLMMDSVTRYAMSSREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSI 303

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLV+GD+ N+PIAD+VRSI+DGHIVL+R LA +G YP ++   SVSR      SA
Sbjct: 304 TGIFTVLVEGDDMNEPIADAVRSIVDGHIVLSRDLAGQGHYPAIEVSGSVSRCMSDVASA 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           ++ +       +I  +  + D+  IG Y  G +  +D A+  +  +  +L+Q
Sbjct: 364 EQIEAAHRFLEIISLYRRSEDLINIGAYAKGSNPKIDNAIAMIDQLNGYLRQ 415


>gi|297617141|ref|YP_003702300.1| flagellar protein export ATPase FliI [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144978|gb|ADI01735.1| flagellar protein export ATPase FliI [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 447

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 147/361 (40%), Positives = 221/361 (61%), Gaps = 5/361 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +   + P+G  + I  G  +   G+ F++       GRV+N LG+PIDG   +
Sbjct: 64  EVVGFKGNKTLLMPLGELDGIGPGSEIVATGQTFKVRVGRSLVGRVLNGLGEPIDGGGPV 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            + + +  +M+  P  + R+R+ +    G+R ID    +  GQR+G+ AGSG+GKSTLL 
Sbjct: 124 -ETETTYPVMNHPPDPLKRRRITEVLPVGVRAIDALVTVGKGQRMGILAGSGVGKSTLLG 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GERGREVR+F+E  LG + LK+SVVVVATSD+  ++R      A
Sbjct: 183 MIARNTEADVSVIALIGERGREVRDFLERDLGEEGLKRSVVVVATSDQPALIRLRGAFVA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAE+F  +G +VLL++DS+TRFA + REI    GE P  RG+  SVF+ LP+LLER G
Sbjct: 243 TSIAEFFRDQGLDVLLLMDSLTRFALAQREIGLAIGEPPATRGFTPSVFALLPKLLERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S  +KG IT + +VLV+GD+ N+PI D+VR I+DGHI L R LA    +P +D L S+S
Sbjct: 303 AS--DKGTITGLYAVLVEGDDMNEPITDAVRGIVDGHIALTRELASLNHFPAIDVLGSIS 360

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S+   +       L+  + E +D+  IG YR G +  +D+A+  +     FL+
Sbjct: 361 RVMPEIVSSSHLESAGRFRSLLAVYREAKDLVDIGAYRRGANPRIDEALELIDGCNAFLQ 420

Query: 419 Q 419
           Q
Sbjct: 421 Q 421


>gi|89111149|dbj|BAE80239.1| HrcN [Acidovorax avenae subsp. avenae]
          Length = 442

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 4/323 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI++LG+PIDG   L   + +  + +  P  M R+ +E    TG++ ID    L  GQ
Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G+GKSTL+ M AR    D  +I+L+GERGREVREF+E  LG+  + +SVVV 
Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD S   R  A   A  +AEY+  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+E+PRLLER G   +  G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R 
Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   +YP +D L S+SR+  +    + ++       L+ ++EE   +  +G Y+PG D 
Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYKPGNDP 404

Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424
           + D+A+ +   I  FL QS SDL
Sbjct: 405 LADEAMEKHEEIRAFLNQSTSDL 427


>gi|147678420|ref|YP_001212635.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Pelotomaculum thermopropionicum SI]
 gi|146274517|dbj|BAF60266.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Pelotomaculum thermopropionicum SI]
          Length = 446

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 219/369 (59%), Gaps = 7/369 (1%)

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+G  + I  G  V   GR F I       GRV+N LG+P+DG   +G    +  + +
Sbjct: 73  LMPLGELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPVGGRTENYPVDN 132

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  + R+R+ +   TG+R +D       GQRIG+F+GSG+GKSTLL M +R    D  
Sbjct: 133 RPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTLLGMVSRFSDADVN 192

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I L+GERGREV +FIE  LG + L +SVVVVATS++  ++R      A  +AEYF  +G
Sbjct: 193 VIGLIGERGREVLDFIETDLGPEGLARSVVVVATSEQPALVRLKGAFVACAVAEYFRDQG 252

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+    GE P  +GY  SVF+ LPRLLER G S    G+ITA
Sbjct: 253 RDVLLMMDSITRFAMAQREVGLAIGEPPATKGYTPSVFALLPRLLERAGMS--SAGSITA 310

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VLVDGD+ N+PI+D+VR ILDGHIVL+RSLA    +P VD L SVSRL     + + 
Sbjct: 311 FFTVLVDGDDLNEPISDAVRGILDGHIVLSRSLAASNHFPAVDVLNSVSRLMPDITTEEH 370

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           +     L  L+  + +  D+  IG Y  G +  +D+A+     I  FL+Q   DL     
Sbjct: 371 RAWAGRLRDLLAAYRQAEDLINIGAYVAGSNPRVDEAIACYQDIVAFLRQ---DLKEHAR 427

Query: 430 FQEITKKLQ 438
           F+E    L+
Sbjct: 428 FEETLAMLE 436


>gi|126455566|ref|YP_001075932.1| type III secretion system ATPase [Burkholderia pseudomallei 1106a]
 gi|242311290|ref|ZP_04810307.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
 gi|254301611|ref|ZP_04969055.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
 gi|48479050|gb|AAT44848.1| ATP synthase [Burkholderia pseudomallei]
 gi|126229334|gb|ABN92747.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106a]
 gi|157810751|gb|EDO87921.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
 gi|242134529|gb|EES20932.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
          Length = 449

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 233/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 29  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG P+DG   L    L   +++  P  M
Sbjct: 87  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGAPLDGGPPLASETLQ-PLIAAPPEPM 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++ +
Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436


>gi|237731989|ref|ZP_04562470.1| flagellum-specific ATP synthase [Citrobacter sp. 30_2]
 gi|226907528|gb|EEH93446.1| flagellum-specific ATP synthase [Citrobacter sp. 30_2]
          Length = 456

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  +    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPAPDTTETGALITPPFNP-LQRTAIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGADGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRHLAEAGHYPAIDIEASISRAMTALISEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434


>gi|260598450|ref|YP_003211021.1| flagellum-specific ATP synthase [Cronobacter turicensis z3032]
 gi|260217627|emb|CBA31919.1| Flagellum-specific ATP synthase [Cronobacter turicensis z3032]
          Length = 470

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 146/334 (43%), Positives = 201/334 (60%), Gaps = 3/334 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  GKP+DG  S         I     P + R  +E     G+R I+    +  G
Sbjct: 131 LGRVLDGAGKPLDGLPSPDTETTGALITPPFNP-LQRTAIEDVLDVGVRPINALLTVGRG 189

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+
Sbjct: 190 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 249

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 250 AAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 309

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 310 GYPPSVFAKLPALVERAGNGITGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 369

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR+     S +    V +   L+  F+  RD+  +G Y  G D
Sbjct: 370 RLAEAGHYPAIDIEASISRVMTAIISEEHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSD 429

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
            +LD+A+   P +  FL+Q   + S  ED  Q +
Sbjct: 430 PMLDRAITLWPQLEAFLQQGIYERSGVEDALQAL 463


>gi|256830795|ref|YP_003159523.1| ATPase, FliI/YscN family [Desulfomicrobium baculatum DSM 4028]
 gi|256579971|gb|ACU91107.1| ATPase, FliI/YscN family [Desulfomicrobium baculatum DSM 4028]
          Length = 448

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/379 (41%), Positives = 229/379 (60%), Gaps = 5/379 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           +V+    D++ + P G    I  G L+ +     + P    + G+ ++A G+ +D + S+
Sbjct: 60  EVVGFRDDVMLLMPYGEMRGIRPGSLIRNTSTPPVFPVGNRYLGQAVDAFGQSLDPEKSI 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +  + +  P  + R R+ +    G+R ++    L  GQR+G+ AGSG+GKSTL+ 
Sbjct: 120 FPARYN-PLHADPPNPLTRPRITEPLDVGVRAVNGLLTLGKGQRVGIMAGSGVGKSTLMG 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    +  +I L+GERGREV +FIE  LG + L KSV++VATSD+ P++R  A   A
Sbjct: 179 MFARYTSAEVNVIGLIGERGREVVDFIEKDLGPEGLAKSVLIVATSDQGPLVRMRAAYAA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AE+F  +G +VLL++DS+TRFA + RE+   +GE P  RGY  +VFS LPRLLER G
Sbjct: 239 TAMAEFFRDEGKDVLLMMDSVTRFAMAAREVGLAAGEPPTTRGYTPTVFSHLPRLLERAG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S K  G+IT + +VLV+GD+ N+P+AD+VRSILDGHIVL R LA++G YP +D L SVS
Sbjct: 299 RSSK--GSITGIYTVLVEGDDFNEPVADAVRSILDGHIVLTRDLADQGHYPSIDVLKSVS 356

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA     A        L  ++  F+   D+  IG Y  G +  +D+A++ V  I  FL+
Sbjct: 357 RLAPDVTPAPVIAAGRDLIRMMATFQRVEDMVNIGAYAAGSNPEIDQALNMVHPIRAFLQ 416

Query: 419 QSPSDLSSEDVFQEITKKL 437
           QS  + S+ D   E  KKL
Sbjct: 417 QSVEERSTLDQAFEDLKKL 435


>gi|167742980|ref|ZP_02415754.1| type III secretion system ATPase [Burkholderia pseudomallei 14]
          Length = 449

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 233/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 29  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG P+DG   L    L   +++  P  M
Sbjct: 87  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGAPLDGGPPLASETLQ-PLIAAPPEPM 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++ +
Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436


>gi|308183513|ref|YP_003927640.1| flagellum-specific ATP synthase [Helicobacter pylori PeCan4]
 gi|308065698|gb|ADO07590.1| flagellum-specific ATP synthase [Helicobacter pylori PeCan4]
          Length = 434

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   S+ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|325567528|ref|ZP_08144195.1| flagellar protein export ATPase FliI [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158961|gb|EGC71107.1| flagellar protein export ATPase FliI [Enterococcus casseliflavus
           ATCC 12755]
          Length = 450

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/404 (39%), Positives = 233/404 (57%), Gaps = 17/404 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S +  +   V  L+ ++     V  Q K    L +V+      V + P+   E I  
Sbjct: 24  GKVSEVVGLLIKVEGLAVFIGEICEVALQNKTHTALAEVVGFVKKTVLLMPLDQLEGIGP 83

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN----- 137
           G LV   G+   +       G  ++ LG+P+D         L +E  S+ P + +     
Sbjct: 84  GCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMA-------LDLETASEYPVSQDSPDPF 136

Query: 138 -RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            RQ++ +   TG+R ID    +  GQRIG+FAGSG+GKSTLL M AR    D ++I L+G
Sbjct: 137 RRQKIAEIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTLLGMLARYCEADVIVIGLIG 196

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV+EFIE+ LG +  +KSVVV ATSD  P++R      A  IAEY+  +G  V+L+
Sbjct: 197 ERGREVKEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAHVATAIAEYYRDQGKKVVLM 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI  ++GE P  +GY  SVF+ LP+LLER G S  +KG+ITA  +VLV
Sbjct: 257 MDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLERSGMS--DKGSITAFYTVLV 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+PIAD+VR ILDGHI+L+R +A +  YP +D   S+SRL     S ++ +    
Sbjct: 315 EGDDMNEPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNSLSRLMKTLVSEEQHEHAGE 374

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L   +  + E +D+  IG Y+ G + + D+A+     I  FL+Q
Sbjct: 375 LKENMAVYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRFLQQ 418


>gi|326315348|ref|YP_004233020.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|89111182|dbj|BAE80271.1| HrcN [Acidovorax avenae subsp. avenae]
 gi|323372184|gb|ADX44453.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 442

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 4/323 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI++LG+PIDG   L   + +  + +  P  M R+ +E    TG++ ID    L  GQ
Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G+GKSTL+ M AR    D  +I+L+GERGREVREF+E  LG+  + +SVVV 
Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD S   R  A   A  +AEY+  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+E+PRLLER G   +  G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R 
Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   +YP +D L S+SR+  +    + ++       L+ ++EE   +  +G Y+PG D 
Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYKPGNDP 404

Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424
           + D+A+ +   I  FL QS SDL
Sbjct: 405 LADEAMEKHEEIRAFLNQSTSDL 427


>gi|254779933|ref|YP_003058040.1| flagellum-specific ATP synthase [Helicobacter pylori B38]
 gi|254001846|emb|CAX30094.1| Flagellum-specific ATP synthase [Helicobacter pylori B38]
          Length = 434

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   S+ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDITSESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|16760916|ref|NP_456533.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141392|ref|NP_804734.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213053041|ref|ZP_03345919.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213425002|ref|ZP_03357752.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213612434|ref|ZP_03370260.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646784|ref|ZP_03376837.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855157|ref|ZP_03383397.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289829464|ref|ZP_06547076.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25290438|pir||AE0752 flagellum-specific ATP synthase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503213|emb|CAD05720.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137019|gb|AAO68583.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 456

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 198/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E   +TG+R I+ 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLETGVRAINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  FL+Q
Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434


>gi|257871292|ref|ZP_05650945.1| flagellum-specific ATP synthase [Enterococcus gallinarum EG2]
 gi|257805456|gb|EEV34278.1| flagellum-specific ATP synthase [Enterococcus gallinarum EG2]
          Length = 450

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/398 (39%), Positives = 227/398 (57%), Gaps = 5/398 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S +  +   V  L+ ++     V  Q K    L +V+      V + P+   E I  
Sbjct: 24  GKVSEVVGLLIKVEGLAVFIGEICEVALQNKTHTALAEVVGFVKKTVLLMPLDQLEGIGP 83

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G LV   G+   +       G  ++ LG+P+D    L        +    P    RQ++ 
Sbjct: 84  GCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMALDLESAP-EYPVSQDSPDPFRRQKIA 142

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TG+R ID    +  GQRIG+FAGSG+GKSTLL M AR    D ++I L+GERGREV
Sbjct: 143 EIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTLLGMLARYCEADVIVIGLIGERGREV 202

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           +EFIE+ LG +  +KSVVV ATSD  P++R      A  IAEY+  +G  V+L++DS+TR
Sbjct: 203 KEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAHVATAIAEYYRDQGKKVVLMMDSVTR 262

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + REI  ++GE P  +GY  SVF+ LP+LLER G S  +KG+ITA  +VLV+GD+ N
Sbjct: 263 FAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLERSGMS--DKGSITAFYTVLVEGDDMN 320

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD+VR ILDGHI+L+R +A +  YP +D   S+SRL     S  + K    L   + 
Sbjct: 321 EPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNSLSRLMKTLVSEKQHKHAGELKENMA 380

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + E +D+  IG Y+ G + + D+A+     I  FL+Q
Sbjct: 381 VYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRFLQQ 418


>gi|217032110|ref|ZP_03437610.1| hypothetical protein HPB128_16g70 [Helicobacter pylori B128]
 gi|216946258|gb|EEC24866.1| hypothetical protein HPB128_16g70 [Helicobacter pylori B128]
          Length = 434

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   S+ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|318605260|emb|CBY26758.1| flagellum-specific ATP synthase FliI [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 455

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 118 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 176

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 177 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 236

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 237 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 296

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 297 YPPSVFAKLPALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D 
Sbjct: 357 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 416

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 417 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 449


>gi|260845697|ref|YP_003223475.1| translocator EscN [Escherichia coli O103:H2 str. 12009]
 gi|57434457|emb|CAI43874.1| EscN protein [Escherichia coli]
 gi|257760844|dbj|BAI32341.1| translocator EscN [Escherichia coli O103:H2 str. 12009]
          Length = 446

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/372 (40%), Positives = 216/372 (58%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P+ 
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGDEFKIRVGDELLGRLVDGIGRPMG 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAE+F  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+     +++  +  +    LI  ++    +  IG Y  G D   DKA+     I 
Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQ 421

Query: 415 DFLKQSPSDLSS 426
            F++QS  D+SS
Sbjct: 422 SFIQQSTKDISS 433


>gi|212702678|ref|ZP_03310806.1| hypothetical protein DESPIG_00706 [Desulfovibrio piger ATCC 29098]
 gi|212673950|gb|EEB34433.1| hypothetical protein DESPIG_00706 [Desulfovibrio piger ATCC 29098]
          Length = 438

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 154/380 (40%), Positives = 225/380 (59%), Gaps = 8/380 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           +V+    ++  + P+G  + IS    V   G     P      GRV++ LG+ +DG  ++
Sbjct: 61  EVVGFVRNVALLSPLGNMQGISPATEVIPTGEILSVPVGYELLGRVVDGLGQAMDGGPAI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +      ++++ P  M R+ + K    G+RVID       GQR+G+FA +G GKSTLLS
Sbjct: 121 -RTRTHYPLVAEAPNPMTRKVISKPISLGLRVIDGVLTCGEGQRMGIFAAAGGGKSTLLS 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
              +    D  +++L+GERGREVREFIE  +G +  KK+V+VV+TSD S + R  A  TA
Sbjct: 180 SILKGCTADVCVLALIGERGREVREFIERDIGPEGRKKAVLVVSTSDRSSMERLKAAYTA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G +VLL++DS+TRF  + REI   +GE P  RG+P SVFSELP+L+ER G
Sbjct: 240 TAIAEYFRDQGKSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSELPKLMERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S  +KG+ITA+ +VLV+GD+  +PIAD  RSILDGHIVL+R LA    YP +D  ASVS
Sbjct: 300 NS--DKGSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +     + K    +L  ++ ++ E   +  IG Y+ G D   D A+  +  +  FL+
Sbjct: 358 RVMNAVVDKEHKAAAQALRKILAKYAEVELLVQIGEYKKGADAEADFALGHIQAVNAFLR 417

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q   + SS   F+E    L+
Sbjct: 418 QGLEEKSS---FEETLAALK 434


>gi|170701290|ref|ZP_02892256.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
 gi|170133813|gb|EDT02175.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
          Length = 463

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/368 (42%), Positives = 224/368 (60%), Gaps = 10/368 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117
           +V+  + ++  + P G    +S    V    R    RI P     GRVI++LG+PIDG  
Sbjct: 85  EVVGFSRNVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L + D    +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL
Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           + MFAR    D  +I+L+GERGREVREF E  LG + + +SVVV ATSD S I R  A  
Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPEGMARSVVVCATSDRSSIERAKAAY 261

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER
Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S  E G+ITA+ +VL + ++  DPIA+ VR ILDGH++L+R +A + RYP +D L S
Sbjct: 322 AGRS--ELGSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +  S +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I  F
Sbjct: 380 LSRVMTQVVSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIARIDAIRAF 439

Query: 417 LKQSPSDL 424
           L Q P+DL
Sbjct: 440 LGQ-PTDL 446


>gi|157145265|ref|YP_001452584.1| flagellum-specific ATP synthase [Citrobacter koseri ATCC BAA-895]
 gi|157082470|gb|ABV12148.1| hypothetical protein CKO_01002 [Citrobacter koseri ATCC BAA-895]
          Length = 456

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  +    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTTETGALITQPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGADGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      +      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTSLITEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434


>gi|253990097|ref|YP_003041453.1| flagellum-specific ATP synthase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781547|emb|CAQ84710.1| flagellum-specific ATP synthase [Photorhabdus asymbiotica]
          Length = 455

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/430 (37%), Positives = 237/430 (55%), Gaps = 23/430 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVGIGE 79
           G ++  T +    T L  ++ LG   + + +N  N+     +V+  N D + + P+   E
Sbjct: 29  GRLTRATGLVMEATGL--HLPLGATCLIERQNGGNIEEVESEVVGFNGDKLLLMPLEDLE 86

Query: 80  EISLGDLVFHW---------GR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            I  G  V+           GR   + P     GRV++  G+P+DG  S   G  +    
Sbjct: 87  GIVPGARVYSRPYSGEDCSSGRQLPLGPE--LLGRVLDGAGRPLDGFPSPDTGYRAPLTT 144

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
             + P + R  + +    G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D 
Sbjct: 145 PPINP-LQRTPISEVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADV 203

Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           +++ L+GERGREV++FIE+ LG   L +SVVV A +D SP+LR      A  IAE F  +
Sbjct: 204 IVVGLIGERGREVKDFIENILGATGLARSVVVAAPADISPLLRMQGASYATRIAEDFRDR 263

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP L+ER G      G+IT
Sbjct: 264 GKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVNGGGSIT 323

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP +D  AS+SR      +  
Sbjct: 324 AFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTSLINKQ 383

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             + V     L+  ++  RD+  +G Y  G D +LDKA+   P +  FL+Q   D+    
Sbjct: 384 HYRQVQQFKQLLASYQRNRDLINVGAYAAGSDPLLDKAIELYPYMAQFLQQ---DIEERS 440

Query: 429 VFQEITKKLQ 438
            +     +LQ
Sbjct: 441 EYAAACTQLQ 450


>gi|87307395|ref|ZP_01089540.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645]
 gi|87290135|gb|EAQ82024.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645]
          Length = 456

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 163/423 (38%), Positives = 247/423 (58%), Gaps = 15/423 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINL 67
           +QL +  S +LV  GG + +I +   T+        +G  V  Q ++   L G+V+    
Sbjct: 6   SQLDQLMSHDLV--GGVVETIGT---TIAVGGFPAPVGSVVEIQRQSGKPLAGEVVGFRG 60

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSM 126
           ++  + P+     +  G  V      R  P      GR+++A G  IDG        L+M
Sbjct: 61  ELTLVFPLEQLSGVRQGSSVRLIRTMRSIPVGDSLLGRIVDAHGNCIDG---FPHPALTM 117

Query: 127 EI-MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              M + PP A +R R+ + F TG+R ID       GQRIG+FAGSG+GKS  L M A+ 
Sbjct: 118 RSPMDQDPPIATSRPRIHETFSTGVRAIDGMLTCGDGQRIGIFAGSGVGKSVTLGMMAKY 177

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              +  +I+L+GERGREV +FIE  LG + + +SVV+VATSD+  I+R  A + A +IAE
Sbjct: 178 ASSEVNVIALIGERGREVNDFIERDLGPEGMARSVVIVATSDQPAIMRVQAAMAATSIAE 237

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF   G  VL ++DS+TRFA + REI   +GE P  +GY  SVF+ LP+L+ER G S + 
Sbjct: 238 YFRESGRRVLFMMDSVTRFAMAQREIGLAAGEPPTTKGYTPSVFAMLPKLVERTGRSAQ- 296

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA  +VLV+GD+ N+P++D+VR +LDGH++L+R++A +G YP +D LAS+SRL + 
Sbjct: 297 -GSITAFYTVLVEGDDTNEPVSDAVRGLLDGHVILSRAIAAKGHYPAIDILASISRLMND 355

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S + ++   ++  L+  + E  D+  IG YR G +  +D A+     I  FL+Q+  +
Sbjct: 356 LVSEETRRAAQTIRELMSTYRENEDLINIGAYRQGTNPQIDLAIRMRSEIDTFLRQAMEE 415

Query: 424 LSS 426
            SS
Sbjct: 416 KSS 418


>gi|170725976|ref|YP_001760002.1| flagellum-specific ATP synthase [Shewanella woodyi ATCC 51908]
 gi|169811323|gb|ACA85907.1| flagellar protein export ATPase FliI [Shewanella woodyi ATCC 51908]
          Length = 446

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 221/364 (60%), Gaps = 3/364 (0%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +VI  + +++Y+ P+     +  G  V   G +  ++      GRV++  G P+DG  
Sbjct: 61  VAEVIGFDDELLYLMPIEELRGVLPGAKVTPLGEQSGLNVGLSLLGRVLDGNGLPLDGLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L     +      + P ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 121 RLQTDQKAPRHAQSINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LGD  + +SVVV A +D SP++R  A  
Sbjct: 180 LGMMTRGTTADVIVVGLVGERGREVKEFIEEILGDEGRARSVVVAAPADTSPLMRLRACE 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER
Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVER 299

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D  AS
Sbjct: 300 AGNGGSGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRQLADSGHYPAIDIEAS 359

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+A    S +  + +  +  +   +++ RD+  IG Y  G D  +D ++   P +  F
Sbjct: 360 ISRVAPMVISPEHLEAMRRVKQVYSLYQQNRDLISIGAYTQGSDPRIDNSIRLQPAMNAF 419

Query: 417 LKQS 420
           L+Q+
Sbjct: 420 LRQT 423


>gi|332161339|ref|YP_004297916.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665569|gb|ADZ42213.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 454

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 448


>gi|207091752|ref|ZP_03239539.1| flagellum-specific ATP synthase [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 434

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   S+ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|83646778|ref|YP_435213.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
 gi|83634821|gb|ABC30788.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
          Length = 416

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/395 (40%), Positives = 230/395 (58%), Gaps = 10/395 (2%)

Query: 38  CLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFR 94
           C      LG+   V   G+ +    +V+      V + P+G    I +G  V   G    
Sbjct: 11  CAGPDAFLGEVCEVFSPGQLTSIAAEVVGFRHGRVLLMPLGRVTGIHVGSEVVATGLPAS 70

Query: 95  ISPSACWCGRVINALGKPIDGD--DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           ++ +    G+V+NA G P+DG    S GK   S  +  +    M R   ++    G+RVI
Sbjct: 71  VTVNDGMLGKVVNAFGTPLDGGVLSSPGK---SYPLYREPINPMERAPCDEPLNLGVRVI 127

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D F  +  GQR+G+FAGSG+GKSTLL M A+    +  +I+L+GERGREV EFI+D LG 
Sbjct: 128 DAFCAMAKGQRVGIFAGSGVGKSTLLGMIAKQCDAEVNVIALIGERGREVSEFIQDNLGS 187

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D LKKSVVV AT+DE  ++R  A   A  IAEYF  KG +V+L +DSITR A + REI  
Sbjct: 188 DGLKKSVVVAATADEPALVRVHAAFVATAIAEYFKDKGKHVMLYMDSITRLATAQREIGL 247

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             GE P +RGY  S FS LPRL ER G   K  G+I+A+ +VLV+GD+ N+P++D+VRSI
Sbjct: 248 AIGEPPTSRGYTPSTFSLLPRLTERAGIF-KSGGSISALYTVLVEGDDFNEPVSDTVRSI 306

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHI+L R LA +G +P +D   S+SRL  +    +++  V  L  L   ++E++++  
Sbjct: 307 LDGHIMLKRQLAHQGIFPAIDIRESMSRLFPRVTGKEQQMAVRELIRLESLYQESKELIE 366

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +G Y+ G D  +D+A+     +  F+ QS  +  S
Sbjct: 367 LGAYKQGGDPEIDQAIRVHKALNKFISQSEGESGS 401


>gi|209695737|ref|YP_002263667.1| flagellum-specific ATP synthase [Aliivibrio salmonicida LFI1238]
 gi|208009690|emb|CAQ79989.1| polar flagellum-specific ATP synthase FliI [Aliivibrio salmonicida
           LFI1238]
          Length = 439

 Score =  263 bits (673), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 213/336 (63%), Gaps = 2/336 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +GKPIDG   +     +    + + P ++R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGKPIDGLGDIYTEQTASFTSTPINP-LSRKPIREPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIED LG +  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEDILGTEGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G   +++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGNEDQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +    +   +  ++  ++    + +D+  IG Y+PG + 
Sbjct: 341 MADAGHYPAIDVERSVSRVMPQITDEEHMLMSKAVRQVLATCRKNQDLVSIGAYKPGTNP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +D+A    P + ++L+Q   +    D+ + + K L
Sbjct: 401 AIDQAFTLKPRLDEYLQQRMKETVPFDMCKNMLKML 436


>gi|187478207|ref|YP_786231.1| flagellum-specific ATP synthase [Bordetella avium 197N]
 gi|115422793|emb|CAJ49321.1| flagellum-specific ATP synthase [Bordetella avium 197N]
          Length = 479

 Score =  263 bits (673), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 141/325 (43%), Positives = 203/325 (62%), Gaps = 6/325 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+D    L   +L+      + P ++R  ++     G+R I+    + 
Sbjct: 130 ALLGRVVDGAGRPLDDLGPLTGAELAPLAAQPINP-LSRAPIDSVLDVGVRAINGLLTVG 188

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 189 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 248

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 249 VVAAPADVSPLLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 308

Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP SVF++LP L+ER G   P    + G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 309 TKGYPPSVFAKLPMLVERTGMGAPGPNGRAGSITAFYTVLAEGDDQQDPIADSARAILDG 368

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H+VL+R+LAE G YP +D  AS+SR      +  +  LV     ++ R++  RD+  +G 
Sbjct: 369 HVVLSRTLAEAGHYPAIDIEASISRAMTSLITPQQFNLVRRFKQMLSRYQRNRDLISVGA 428

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y PG D  LD+A+ + P +  FL+Q
Sbjct: 429 YVPGADPQLDEAIARYPRLEAFLQQ 453


>gi|238764900|ref|ZP_04625840.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
 gi|238696919|gb|EEP89696.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
          Length = 454

 Score =  263 bits (673), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 416 LLDKAIALYPQMEIFLQQGMYERSSYEDACQHL 448


>gi|168234145|ref|ZP_02659203.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194472268|ref|ZP_03078252.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194458632|gb|EDX47471.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205331873|gb|EDZ18637.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 456

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  FL+Q
Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434


>gi|149178726|ref|ZP_01857309.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797]
 gi|148842424|gb|EDL56804.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797]
          Length = 458

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 208/324 (64%), Gaps = 8/324 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++  G+ IDG +   +  LS     K  P   +NR R++    TGIR ID       
Sbjct: 97  GRVLDGRGRCIDGKN---QAMLSHRANLKAKPISPLNRPRIDSPLSTGIRTIDGLLTCGK 153

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKSTL+   AR    D  ++ LVGERGREVREF++  LG + L++SVV
Sbjct: 154 GQRLGIFAGSGVGKSTLMGQMARQSSADINVVCLVGERGREVREFLDRDLGSEGLERSVV 213

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +VATSDE  ++R  A   A  ++E+F   G +VLL++DS+TR+A + REI   +GE P  
Sbjct: 214 IVATSDEPALIRLRAAHLATAVSEFFRDCGKDVLLMMDSVTRYALAQREIGLAAGEPPAT 273

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVFS LP+LLER G    E G+IT   +VLV+ D+ N+PI+D+VR ILDGHI+L+
Sbjct: 274 RGYPPSVFSLLPKLLERSG--RTESGSITGFYTVLVEADDANEPISDTVRGILDGHIMLS 331

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA E  +P +D L S+SR  +   SA+ ++ V+ +  L+  ++++ D+  IG Y+ G 
Sbjct: 332 RKLAHESHWPAIDVLQSISRSMNDITSAEHQQSVAQIKKLMAAYQQSEDLISIGAYQAGS 391

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423
           +  +D A+   P+  ++LKQ  ++
Sbjct: 392 NPEVDLAIKMRPLWNEYLKQGNTE 415


>gi|16765310|ref|NP_460925.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62180547|ref|YP_216964.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161613459|ref|YP_001587424.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552796|ref|ZP_02346547.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167993547|ref|ZP_02574641.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168239212|ref|ZP_02664270.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244823|ref|ZP_02669755.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168259741|ref|ZP_02681714.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168462487|ref|ZP_02696418.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168823015|ref|ZP_02835015.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194445652|ref|YP_002041237.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449682|ref|YP_002046023.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194737833|ref|YP_002115006.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197247761|ref|YP_002146051.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262536|ref|ZP_03162610.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198245111|ref|YP_002215114.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390464|ref|ZP_03217075.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204931084|ref|ZP_03221910.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205352334|ref|YP_002226135.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856515|ref|YP_002243166.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|238912455|ref|ZP_04656292.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|120332|sp|P26465|FLII_SALTY RecName: Full=Flagellum-specific ATP synthase
 gi|154029|gb|AAA27101.1| flagellar protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420507|gb|AAL20884.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62128180|gb|AAX65883.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161362823|gb|ABX66591.1| hypothetical protein SPAB_01176 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404315|gb|ACF64537.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407986|gb|ACF68205.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194713335|gb|ACF92556.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195634519|gb|EDX52871.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197211464|gb|ACH48861.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240791|gb|EDY23411.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197288094|gb|EDY27481.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197939627|gb|ACH76960.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602909|gb|EDZ01455.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320128|gb|EDZ05333.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205272115|emb|CAR36968.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205322649|gb|EDZ10488.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328423|gb|EDZ15187.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205336374|gb|EDZ23138.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205340669|gb|EDZ27433.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205350730|gb|EDZ37361.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708318|emb|CAR32621.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261247138|emb|CBG24961.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267993961|gb|ACY88846.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158486|emb|CBW17996.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912962|dbj|BAJ36936.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085409|emb|CBY95190.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224617|gb|EFX49680.1| Flagellum-specific ATP synthase FliI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616965|gb|EFY13873.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618204|gb|EFY15096.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625875|gb|EFY22694.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626327|gb|EFY23137.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632742|gb|EFY29487.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322639084|gb|EFY35777.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640400|gb|EFY37056.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647239|gb|EFY43738.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649913|gb|EFY46334.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655521|gb|EFY51829.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660299|gb|EFY56537.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662980|gb|EFY59187.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668165|gb|EFY64324.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674076|gb|EFY70170.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675572|gb|EFY71646.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683017|gb|EFY79033.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686711|gb|EFY82689.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195401|gb|EFZ80581.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198071|gb|EFZ83188.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204457|gb|EFZ89463.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207547|gb|EFZ92495.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211014|gb|EFZ95874.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217532|gb|EGA02251.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219607|gb|EGA04091.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226678|gb|EGA10875.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231554|gb|EGA15667.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235997|gb|EGA20076.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240567|gb|EGA24610.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245459|gb|EGA29459.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250229|gb|EGA34121.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253960|gb|EGA37784.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323262110|gb|EGA45673.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266233|gb|EGA49723.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270658|gb|EGA54099.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326627384|gb|EGE33727.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988861|gb|AEF07844.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 456

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  FL+Q
Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434


>gi|315126016|ref|YP_004068019.1| FliI, flagellum-specific ATP synthase [Pseudoalteromonas sp.
           SM9913]
 gi|315014530|gb|ADT67868.1| Putative FliI, flagellum-specific ATP synthase [Pseudoalteromonas
           sp. SM9913]
          Length = 449

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 153/374 (40%), Positives = 224/374 (59%), Gaps = 23/374 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-------ISPSACWCGRVINALGKP 112
            +V+  N D  Y+ P+   + +      +  GR R       ++ S    GRVI+A  +P
Sbjct: 61  AEVVGFNQDEAYLMPLKKIQNL------YSGGRVRPVIKNSHVAISEKLLGRVIDAQMQP 114

Query: 113 IDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           ID       D ++    L  +  S  P  + R+ V +    GIR I+    +  GQR+G+
Sbjct: 115 IDNLGPLEQDSTMSACKLGND-YSLTP--LERKGVTEPLDVGIRAINSLFSVGKGQRLGL 171

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225
           FAGSG+GKS LL M  R    D VI+SLVGERG EV++FIE  LG + LKK++V+ + +D
Sbjct: 172 FAGSGVGKSKLLGMMTRFTSADVVIVSLVGERGWEVKDFIEQSLGKEGLKKAIVIASPAD 231

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +SP+LR  A   +  +A YF  K  NVLL++DS+TR+A + REI  + GELP ++GYP S
Sbjct: 232 DSPLLRIKAAELSHKLAAYFRDKNSNVLLLMDSLTRYAQAQREIGLSVGELPASKGYPPS 291

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VFS+L +L+E  G SEK KG++TA+ +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE+
Sbjct: 292 VFSKLTQLVESSGNSEKSKGSMTAIYTVLAEGDDQQDPIADNARAILDGHIVLDRTLAEK 351

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G YP ++  +S+SR+     S ++      L  L  R+ +  ++  +G Y+ G D  LD 
Sbjct: 352 GHYPAINISSSISRVMPNIVSDEQLSFCYKLKKLYSRYMQVHELIPLGAYQAGKDPELDS 411

Query: 406 AVHQVPIIYDFLKQ 419
           AV+  P I  FL Q
Sbjct: 412 AVNLYPKIESFLCQ 425


>gi|145297447|ref|YP_001140288.1| lateral flagellar FliI-like assembly ATPase protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850219|gb|ABO88540.1| lateral flagellar FliI-like assembly ATPase protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 446

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/385 (40%), Positives = 227/385 (58%), Gaps = 9/385 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117
           L +V+  N DI Y+ P+     +  G  V    G   I       GRV++ L +P+DG  
Sbjct: 60  LAEVVGFNRDISYLMPLQPMSGLYAGARVLPIDGEETIQVGEHLLGRVVDGLLQPLDGRP 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC---HGQRIGVFAGSGIGK 174
               G+  + + +  P  + R  V +    GIR I+    L     GQR+G+FAGSG+GK
Sbjct: 120 LRDDGE-RVALFAIPPNPLLRTPVREPLDVGIRAINGLNGLLTVGKGQRLGLFAGSGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           S LL M  R+     V++ L+GERGREVREFIE  LG + L ++VVV A +D+SP++R  
Sbjct: 179 SMLLGMMTRNTTAQIVVVGLIGERGREVREFIEHSLGPEGLARAVVVAAPADQSPLMRLR 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A      IAEYF  +G +VLL++DS+TR+A + REI    GE P  RGYP SVFS L +L
Sbjct: 239 AAQLCHRIAEYFREQGRDVLLLMDSLTRYAQAQREIVLAIGEPPATRGYPPSVFSMLTQL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G    + G+++A  +VL +GD+  DP+ D+ R+ILDGHIVL R LAEEG YP +D 
Sbjct: 299 VERAGNGIHQDGSLSAFYTVLAEGDDQQDPVVDAARAILDGHIVLTRRLAEEGHYPAIDI 358

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            ASVSR+  +   A+ + L  +L  L  R+++ R++  +GGY+PG D  +D+AV + P I
Sbjct: 359 GASVSRVMPQVVPAEWQTLAVTLRQLWGRYQQVRELLPLGGYQPGADPQMDEAVQRYPAI 418

Query: 414 YDFLKQSPSDLSSEDVFQEITKKLQ 438
             FL+Q    +  E  F ++   L+
Sbjct: 419 AAFLQQG---IHEETPFVQVMTGLK 440


>gi|145597809|ref|YP_001161885.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
 gi|145209505|gb|ABP38912.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
          Length = 442

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 150/363 (41%), Positives = 207/363 (57%), Gaps = 12/363 (3%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + DI Y+ P      +  G  VF     G   I  S  W GRVIN LG+P+DG  
Sbjct: 60  QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPLDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG      + + ++ P + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS L
Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE  L    + KSVVV A +DESP++R  A  
Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 237 LCHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S      +TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S
Sbjct: 297 AGNS-----TMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 351

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR   +   + + K  S L      +   + +  +GGY  G D + D+AVH  P I  F
Sbjct: 352 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 411

Query: 417 LKQ 419
           L+Q
Sbjct: 412 LRQ 414


>gi|167626147|ref|YP_001676441.1| FliI/YscN family ATPase [Shewanella halifaxensis HAW-EB4]
 gi|167356169|gb|ABZ78782.1| ATPase, FliI/YscN family [Shewanella halifaxensis HAW-EB4]
          Length = 446

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 207/340 (60%), Gaps = 5/340 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           GR +I       GRV++ LG+P+D D    K    + +  K    + R+ +      GIR
Sbjct: 87  GRCQIPTGLGLLGRVLDGLGQPLD-DLGCIKHLPHVPLQFKSINPLLRKPIRDPLDVGIR 145

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREVREFIE+ L
Sbjct: 146 SINALLPVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEESL 205

Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G+   K++VVV A +D +P++R  A      IA  +  +G  VLL++DS+TR+A + REI
Sbjct: 206 GEEGRKRAVVVAAPADTTPLMRMRAMRLCHHIAAAYRDQGKQVLLLVDSLTRYAQAQREI 265

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A + GE P  +GYP S F++LP L+E  G S+   G +TA  +VL +GD+  DPIADS R
Sbjct: 266 ALSLGEPPATKGYPPSAFAQLPSLVEMAGNSQHPTGTLTAFYTVLTEGDDQQDPIADSAR 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGHIVLNR LAE+G +P +D  ASVSRLA +       +      HL  R+ E +++
Sbjct: 326 AILDGHIVLNRKLAEQGHFPAIDIGASVSRLATQVAKQSSLEQGQWFRHLNSRYNEVKEL 385

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDLSS 426
             +GGY+ G D  +D AV   P +  FL+Q   + +DL+S
Sbjct: 386 LPLGGYQAGHDAEMDMAVRSYPQMAAFLRQATHTQADLTS 425


>gi|238788330|ref|ZP_04632124.1| Flagellum-specific ATP synthase [Yersinia frederiksenii ATCC 33641]
 gi|238723576|gb|EEQ15222.1| Flagellum-specific ATP synthase [Yersinia frederiksenii ATCC 33641]
          Length = 454

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 448


>gi|317013186|gb|ADU83794.1| flagellum-specific ATP synthase [Helicobacter pylori Lithuania75]
          Length = 434

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   S+ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|122919955|pdb|2DPY|A Chain A, Crystal Structure Of The Flagellar Type Iii Atpase Flii
 gi|122919956|pdb|2DPY|B Chain B, Crystal Structure Of The Flagellar Type Iii Atpase Flii
          Length = 438

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/327 (44%), Positives = 197/327 (60%), Gaps = 12/327 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E    TG+R I+ 
Sbjct: 97  ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 151 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 211 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 270

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 271 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 330

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G
Sbjct: 331 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 390

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
            Y  G D +LDKA+   P +  FL+Q 
Sbjct: 391 AYAKGSDPMLDKAITLWPQLEAFLQQG 417


>gi|193062173|ref|ZP_03043269.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E22]
 gi|194426383|ref|ZP_03058938.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli B171]
 gi|17384650|emb|CAC81862.1| EscN protein [Escherichia coli]
 gi|192932393|gb|EDV84991.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E22]
 gi|194415691|gb|EDX31958.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli B171]
 gi|195183198|dbj|BAG66743.1| translocator EscN [Escherichia coli O111:H-]
 gi|254692340|emb|CAR47981.1| EscN protein [Escherichia coli]
 gi|254692408|emb|CAR48051.1| EscN protein [Escherichia coli]
          Length = 446

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P+ 
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAE+F  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+     I 
Sbjct: 362 LSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQ 421

Query: 415 DFLKQSPSDLSS 426
            F++QS  D+SS
Sbjct: 422 SFIQQSTKDISS 433


>gi|332162910|ref|YP_004299487.1| ATPase, FliI/YscN family [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667140|gb|ADZ43784.1| ATPase, FliI/YscN family [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862346|emb|CBX72506.1| flagellum-specific ATP synthase [Yersinia enterocolitica W22703]
          Length = 445

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 211/363 (58%), Gaps = 8/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + ++ Y+ P    + +  G  VF     G   I  S  W GRV+N LG+PIDG  
Sbjct: 60  QVVGFDREVTYLMPFKQPDGLMSGARVFPCELDGELLIGDS--WLGRVVNGLGEPIDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           SLG      + + ++ P + RQ V      G++ I+    +  GQR+G+ AGSG+GKS L
Sbjct: 118 SLGGETPLQQQLPQIHP-LQRQPVSTPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSML 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE  L    + KSVV+ A +DESP++R  A  
Sbjct: 177 LGMMTRYTQADVVVVGLIGERGREVKEFIEHSLQASGMAKSVVIAAPADESPLMRIKATE 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              ++A Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 237 LCHSVATYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G +TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S
Sbjct: 297 AGNSHG-SGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRQLAESGHYPAIDIGQS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR   +    ++ +    L      + + + +  +GGY  G D + D+AV   P I DF
Sbjct: 356 ISRCMSQISPREQIQSARLLKQCYADYMDIKPLIPLGGYVAGADPMADRAVQYYPAIIDF 415

Query: 417 LKQ 419
           L+Q
Sbjct: 416 LRQ 418


>gi|300696963|ref|YP_003747624.1| FliI: flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum CFBP2957]
 gi|299073687|emb|CBJ53207.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum CFBP2957]
          Length = 481

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G+P+DG   LG  + L+   +S  P   + R+ +E     G+R I+    +  
Sbjct: 138 GRVVDANGEPLDGKGPLGTHEELAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S V
Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  
Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317

Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP S F++LP L+ER G     +    G+ITA  +VL +GD+  DPIAD+ R+ILDGH
Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y
Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVQREQLDTARRFKQLYARYQRNRDLIAVGAY 437

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D + D+A+ + P +  FL+Q
Sbjct: 438 ARGSDPMTDQAIARYPDMEGFLQQ 461


>gi|2731646|gb|AAB93498.1| ATPase [Helicobacter pylori]
          Length = 434

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 158/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   S+ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|224583529|ref|YP_002637327.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224468056|gb|ACN45886.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322715023|gb|EFZ06594.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130251|gb|ADX17681.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326622862|gb|EGE29207.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 466

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E    TG+R I+ 
Sbjct: 125 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 178

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 179 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 238

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 239 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 298

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 299 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 358

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G
Sbjct: 359 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 418

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  FL+Q
Sbjct: 419 AYAKGSDPMLDKAITLWPQLEAFLQQ 444


>gi|167464166|ref|ZP_02329255.1| flagellar protein export ATPase FliI [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322382300|ref|ZP_08056207.1| flagellum-specific ATP synthase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153653|gb|EFX46028.1| flagellum-specific ATP synthase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 439

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 152/372 (40%), Positives = 231/372 (62%), Gaps = 8/372 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G  + I  G  V   G+    P      G+V++ LG+P+DG  S     ++   
Sbjct: 69  VILMPLGELDSIGPGCDVVGTGKPLTVPVGHELLGKVLDGLGQPLDG--SFLPSRMTQYS 126

Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
            +  P   + R RV +    G++ ID    +  GQR+G+FAGSG+GKSTL+ M AR+   
Sbjct: 127 TNNSPNNPLQRPRVLEPLGVGVKCIDGLLTIGRGQRVGIFAGSGVGKSTLMGMIARNTEA 186

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREV +FIE  LG + L +SVV+VATSD+  ++R    L A +IAEYF 
Sbjct: 187 DVNVIALIGERGREVLDFIERDLGPEGLARSVVIVATSDQPALIRIKGALIATSIAEYFR 246

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G NV+L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER G     KG+
Sbjct: 247 DRGLNVMLMMDSVTRFAMAQREVGLAVGEPPATRGYTPSVFALLPKLLERSG--NGPKGS 304

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G YP +D L+SVSR+  +  S
Sbjct: 305 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRNLAHKGHYPAIDVLSSVSRVMKEIVS 364

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LS 425
            +++     L  L+  + ++ D+  +G Y+ G +  +D ++  +  I++F +Q  +D ++
Sbjct: 365 DEQQSAADQLKRLLAIYRDSEDLINLGAYQKGSNPDIDLSLQYIESIWEFTRQKTTDKVT 424

Query: 426 SEDVFQEITKKL 437
            E   Q++ ++ 
Sbjct: 425 IEQAKQQLIEQF 436


>gi|261340406|ref|ZP_05968264.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317498|gb|EFC56436.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
          Length = 456

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGGGKPLDGLPSPDTTETGALITQPFNP-LQRTAIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGITGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      +      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAITLWPQLEAFLQQ 434


>gi|123442767|ref|YP_001006744.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089728|emb|CAL12581.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 443

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/335 (43%), Positives = 202/335 (60%), Gaps = 3/335 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  
Sbjct: 104 LLGRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV
Sbjct: 163 GQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVV 222

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           + A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  
Sbjct: 223 IAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPAT 282

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+
Sbjct: 283 KGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLS 342

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G 
Sbjct: 343 RRLAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGS 402

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           D +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 403 DPLLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 437


>gi|83747625|ref|ZP_00944661.1| FliI [Ralstonia solanacearum UW551]
 gi|207739706|ref|YP_002258099.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           IPO1609]
 gi|83725677|gb|EAP72819.1| FliI [Ralstonia solanacearum UW551]
 gi|206593088|emb|CAQ59994.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           IPO1609]
          Length = 481

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G+P+DG   LG  + L+   +S  P   + R+ +E     G+R I+    +  
Sbjct: 138 GRVVDANGEPLDGKGPLGTHEELAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S V
Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  
Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317

Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP S F++LP L+ER G     +    G+ITA  +VL +GD+  DPIAD+ R+ILDGH
Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y
Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVQREQLDAARRFKQLYARYQRNRDLIAVGAY 437

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D + D+A+ + P +  FL+Q
Sbjct: 438 ARGSDPMTDQAIARYPDMEGFLQQ 461


>gi|207728377|ref|YP_002256771.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           MolK2]
 gi|206591623|emb|CAQ57235.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           MolK2]
          Length = 481

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G+P+DG   LG  + L+   +S  P   + R+ +E     G+R I+    +  
Sbjct: 138 GRVVDANGEPLDGKGPLGTHEELAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S V
Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  
Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317

Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP S F++LP L+ER G     +    G+ITA  +VL +GD+  DPIAD+ R+ILDGH
Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y
Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVQREQLDAARRFKQLYARYQRNRDLIAVGAY 437

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D + D+A+ + P +  FL+Q
Sbjct: 438 ARGSDPMTDQAIARYPDMEGFLQQ 461


>gi|163781860|ref|ZP_02176860.1| flagellar export protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883080|gb|EDP76584.1| flagellar export protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 428

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/362 (40%), Positives = 217/362 (59%), Gaps = 5/362 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
           G+VI  N D   + P G    I  GD V                G+V+N  G+P+DG   
Sbjct: 43  GEVIGFNEDRCIVMPYGRLSGIKPGDRVLIKSEHVSTQVGKALLGKVVNPFGEPLDGSMV 102

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                L +E+ S  P  + R+R+ + F TG+R I+    L  GQ++G+FAG+G+GKSTLL
Sbjct: 103 FTAERLPIELSSINP--LERERITEIFDTGVRSINAMFTLGKGQKVGIFAGAGVGKSTLL 160

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M       D V+++L+GERGREVREF+ED LGD LKKSVVVV+T+DE P+++    L+A
Sbjct: 161 GMITNYSNADVVVMALIGERGREVREFVEDVLGDGLKKSVVVVSTADEPPVVKVKGALSA 220

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           V  A +F+S+G +VLL++DSITRFA + REI   +GE P  +GY  SVF  +  ++E  G
Sbjct: 221 VVHARFFASQGLDVLLVMDSITRFAMAQREIGLAAGEPPTLKGYTPSVFHMMTNIVESCG 280

Query: 299 PSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              +  G+IT + SVLV+GD+   DP+AD++  + DGHIVL+R  A  G +P +DP+ S+
Sbjct: 281 NFTR-GGSITGIFSVLVEGDDITLDPVADALVGVFDGHIVLSRKRANAGLFPAIDPVKSL 339

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL  K  S +  ++   +  L+  +E   D+  +G Y+ G +L +D+ +    +I  F 
Sbjct: 340 SRLMPKLVSEEHMRMAMYVKELLSSYESMEDLVNLGLYKRGSNLAVDRVIDNKELIDGFF 399

Query: 418 KQ 419
           +Q
Sbjct: 400 RQ 401


>gi|238758094|ref|ZP_04619274.1| Flagellum-specific ATP synthase [Yersinia aldovae ATCC 35236]
 gi|238703632|gb|EEP96169.1| Flagellum-specific ATP synthase [Yersinia aldovae ATCC 35236]
          Length = 454

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 199/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSQVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYD 442


>gi|85711039|ref|ZP_01042099.1| flagellum-specific ATP synthase [Idiomarina baltica OS145]
 gi|85694952|gb|EAQ32890.1| flagellum-specific ATP synthase [Idiomarina baltica OS145]
          Length = 445

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 157/435 (36%), Positives = 239/435 (54%), Gaps = 9/435 (2%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
            A L +      V+  GY++ +  + +    +     +G     +  + D   +V+    
Sbjct: 9   FASLKKRVKPAPVLVSGYLTRVVGLMFEAVGVR--APIGATCAVESAHGDIEAEVVGFEG 66

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSM 126
              Y+ P+     +  G  V    R    P      GRVI+A G P+D    +   + + 
Sbjct: 67  QTSYLMPMDDAHGVVPGAKVKPLTRTEQLPLGLELLGRVIDARGHPLDAKGPILTDNQNA 126

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                + P +NR+ V+     G+  I+    +  GQR+G+FAGSG+GKS LL M  +   
Sbjct: 127 YRSLPINP-LNRRPVKVPLDVGVNAINACITVGQGQRMGLFAGSGVGKSVLLGMMTKGTN 185

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFI++ LG+  L+K+VVV A +D+SP+LR     TA  +AEYF
Sbjct: 186 ADVIVVGLIGERGREVKEFIDEILGEEGLEKAVVVAAPADQSPLLRLRGCETASKVAEYF 245

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G NVLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G     +G
Sbjct: 246 RDQGMNVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGGGAQG 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVLNR LA+ G YP +D  AS+SR+  +  
Sbjct: 306 SITAFYTVLTEGDDLQDPIADSARAILDGHIVLNRELADSGHYPAIDIEASISRVMPQVV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           S +  +  + +      F   RD+  IG Y  G D  +D+A+   P +  FL Q  +++ 
Sbjct: 366 SDEHLQRATKVRQWYSSFRRNRDLISIGAYSKGSDAKIDEAIAMQPQVEGFLTQRMNEVI 425

Query: 426 SED----VFQEITKK 436
           S D      Q++T++
Sbjct: 426 SYDESLMKLQQLTQR 440


>gi|91792685|ref|YP_562336.1| flagellum-specific ATP synthase [Shewanella denitrificans OS217]
 gi|91714687|gb|ABE54613.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
          Length = 446

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 203/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G P+DG  +L     +      + P ++R+ + +    G+R I+    +  GQ
Sbjct: 106 GRVLDGNGLPLDGLGALNTDQHASRHGPSINP-LSRRAITEPLDVGVRAINAMLTVGKGQ 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           R+G+FAGSG+GKS LL M  R    D +++ LVGERGREV+EFIE+ LG++ + +SVVV 
Sbjct: 165 RMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEHGRARSVVVA 224

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R  A  T+  IAEYF   G NVLL++DS+TR+A + RE+A   GE P  +G
Sbjct: 225 APADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREVALAVGEPPATKG 284

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LPRL+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 285 YPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRR 344

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D  +S+SR+A    S +  + +  +  +   +++ RD+  IG Y  G D 
Sbjct: 345 LADSGHYPAIDIESSISRVAPMVISNEHLEAMRRVKQMYSMYQQNRDLISIGAYAQGSDP 404

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A+   P +  FL+Q
Sbjct: 405 RIDNAIRLQPAMNAFLRQ 422


>gi|308064174|gb|ADO06061.1| flagellum-specific ATP synthase [Helicobacter pylori Sat464]
          Length = 434

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIQKKALMEQFLTQDENALQPFEQSFQQLEEILR 434


>gi|292492384|ref|YP_003527823.1| ATPase, FliI/YscN family [Nitrosococcus halophilus Nc4]
 gi|291580979|gb|ADE15436.1| ATPase, FliI/YscN family [Nitrosococcus halophilus Nc4]
          Length = 480

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 201/318 (63%), Gaps = 4/318 (1%)

Query: 104 RVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           RV++  G+P+DG   L     +S++     P  + RQ + +    G+  I+    +  GQ
Sbjct: 118 RVLDGGGRPLDGLGPLRTPHHVSLDGQPINP--LARQPIREPLDVGVAAINGLITIGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M  R    D +++ L+GERGREV+EFIE  LG + L +SVVV 
Sbjct: 176 RMGLFAGSGVGKSILLGMMTRYAKADVIVVGLIGERGREVQEFIESTLGPEGLARSVVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +D SP++R    + A +IAEYF  +G  VLL++DS+TRFAH+ RE+A   GE P  RG
Sbjct: 236 TPADHSPLMRLHGAMLATSIAEYFRDQGRQVLLLMDSLTRFAHAQRELALAIGEPPATRG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+++P+L+ER G      G+ITA  +VL +GD+ NDP+AD+ R+ILDGHIVL+R 
Sbjct: 296 YPPSVFAKVPQLVERAGNGRSGSGSITAFYTVLTEGDDANDPVADAARAILDGHIVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  ASVSR+  +  + + ++       +   +++ RD+  +G YR G D 
Sbjct: 356 LAEAGHYPAIDIEASVSRVMSQITTPEHRQAAQQFKQIYSLYQQNRDLISVGAYRRGGDP 415

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            LD+A+ + P    FL+Q
Sbjct: 416 RLDEAIDRQPRFQTFLQQ 433


>gi|315453781|ref|YP_004074051.1| flagellum-specific ATP synthase [Helicobacter felis ATCC 49179]
 gi|315132833|emb|CBY83461.1| flagellum-specific ATP synthase [Helicobacter felis ATCC 49179]
          Length = 436

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 155/398 (38%), Positives = 231/398 (58%), Gaps = 7/398 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWC 102
           +GD V V +G   + LG V+ +        P    E   +GD V         P      
Sbjct: 40  VGDVVKVERGDGKECLGMVVVVEQTQFGFAPFSFVEGCKVGDRVLFVKEGLSFPVGEGLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG P+D +    +      +M +    ++R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLDPLGNPLD-ELGFVRASAFAPVMVEPMKPLDRGVIDEPFGVGVKSIDALLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFI   L  NL  +V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMVVRGCSAPIKVIALIGERGREIPEFIHKNLQGNLDNTVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL ++DSITRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGHDVLFMMDSITRFAMAQREIGLAMGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  + LP+L+ER G  EK KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALTLLPQLMERAG-KEKNKGSITAFFTVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL-IGGYRPGVDL 401
            + G YPP++ L S SR++ K  SA E  L +     +H   +  ++ + IG Y+PG D 
Sbjct: 338 TDHGIYPPINILNSASRVS-KEVSATEHMLAARKFRKLHALLKENEVLIRIGSYQPGFDA 396

Query: 402 ILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITKKLQ 438
            LD+A+ +   +  F+ Q   ++  S    Q++   +Q
Sbjct: 397 DLDEAIAKKAGMEAFMLQEEEEIVPSNTSIQQLIALMQ 434


>gi|13447716|gb|AAK26715.1|AF200363_23 EscN [Escherichia coli]
 gi|18034520|gb|AAL57542.1|AF453441_26 EscN [Escherichia coli]
          Length = 446

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P+ 
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAE+F  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LL
Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+     I 
Sbjct: 362 LSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPGADKAIKNRKAIQ 421

Query: 415 DFLKQSPSDLSS 426
            F++QS  D+SS
Sbjct: 422 SFIQQSTKDISS 433


>gi|15646029|ref|NP_208211.1| flagellum-specific ATP synthase [Helicobacter pylori 26695]
 gi|2493149|sp|O07025|FLII_HELPY RecName: Full=Flagellum-specific ATP synthase
 gi|2314594|gb|AAD08462.1| flagellar export protein ATP synthase (fliI) [Helicobacter pylori
           26695]
          Length = 434

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   S+ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQTRSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|213609479|ref|ZP_03369305.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|289827346|ref|ZP_06545992.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 341

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 151/334 (45%), Positives = 206/334 (61%), Gaps = 11/334 (3%)

Query: 103 GRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           GRVI+  G+P+DG    D   K   +M      PPAM RQ + +   TGIR ID      
Sbjct: 7   GRVIDGFGRPLDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCG 61

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SV 218
            GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V
Sbjct: 62  EGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCV 121

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V
Sbjct: 122 IVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAV 181

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           +  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL
Sbjct: 182 SGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVL 239

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ G
Sbjct: 240 SRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRG 299

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           VD   DKA+   P I  FL+QS  ++   ++  E
Sbjct: 300 VDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIE 333


>gi|208435290|ref|YP_002266956.1| flagellum-specific ATP synthase [Helicobacter pylori G27]
 gi|208433219|gb|ACI28090.1| flagellum-specific ATP synthase [Helicobacter pylori G27]
          Length = 434

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 146/337 (43%), Positives = 209/337 (62%), Gaps = 3/337 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILK 434


>gi|320324513|gb|EFW80590.1| type III secretion component, putative [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320328367|gb|EFW84370.1| type III secretion component, putative [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330882192|gb|EGH16341.1| type III secretion component [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 442

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 163/408 (39%), Positives = 226/408 (55%), Gaps = 9/408 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG     K  +    +   PPA  +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTAKLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E  L    + ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP  +  G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ + L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRHLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+  S
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSEHDS 429


>gi|217425420|ref|ZP_03456914.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
 gi|217391671|gb|EEC31699.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
          Length = 449

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 29  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG+P+DG   L    L   +++  P  M
Sbjct: 87  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLVSETLQ-PLIAAPPEPM 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++ +
Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436


>gi|238028890|ref|YP_002913121.1| flagellum-specific ATP synthase FliI [Burkholderia glumae BGR1]
 gi|237878084|gb|ACR30417.1| Flagellum-specific ATP synthase FliI [Burkholderia glumae BGR1]
          Length = 480

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 144/322 (44%), Positives = 202/322 (62%), Gaps = 10/322 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+D    LG  +L   + +     + R+ +      G+R I+    +  GQ
Sbjct: 140 GRVVDASGRPLDRLGPLGS-ELDAPLSAPTINPLEREPIHHVLDVGVRAINALLTVGRGQ 198

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV 
Sbjct: 199 RMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVA 258

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +G
Sbjct: 259 APADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKG 318

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 319 YPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 378

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYRP 397
           LAE G YP +D   S+SR    A +A  D++ L  V     ++ R++  RD+  +G Y  
Sbjct: 379 LAEAGHYPAIDIEQSISR----AMTALIDDRHLDRVRRFKQMLSRYQRNRDLIAVGAYAA 434

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
           G D  LD+A+   P I  FL+Q
Sbjct: 435 GRDAQLDRAIALYPRIEAFLQQ 456


>gi|238751778|ref|ZP_04613266.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
 gi|238710049|gb|EEQ02279.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
          Length = 454

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 145/334 (43%), Positives = 202/334 (60%), Gaps = 3/334 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +      +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETSYCAPLITPPINP-LQRTAIEQVLDVGVRTINSLLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434
           +LDKA+   P +  FL+Q   + SS ED  Q +T
Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHLT 449


>gi|297530603|ref|YP_003671878.1| flagellar protein export ATPase FliI [Geobacillus sp. C56-T3]
 gi|297253855|gb|ADI27301.1| flagellar protein export ATPase FliI [Geobacillus sp. C56-T3]
          Length = 422

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 214/363 (58%), Gaps = 5/363 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  +   V + P      I+ G  V   GR   +       G V++ LG+P+DG   
Sbjct: 42  AEVVGFHEQHVLLMPFSATTHIAPGCFVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-L 100

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G   + +    P  + R  + +  + GIRVID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 101 LPPGLKPVSVERDPPNPLVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLM 160

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREVREF+E  LG D L +SVVVVATSD+  ++R     T
Sbjct: 161 GMIARHTSADVNVIALIGERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYT 220

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V+L++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER 
Sbjct: 221 ATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERA 280

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G ITA  +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SV
Sbjct: 281 G--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSV 338

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+     SA+ ++  +    L+  + ++ D+  IG Y+ G    +D+A+   P +  F 
Sbjct: 339 SRVMPHVISAEHREAANRFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFC 398

Query: 418 KQS 420
           +Q+
Sbjct: 399 RQN 401


>gi|91795003|ref|YP_564654.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
 gi|91717005|gb|ABE56931.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
          Length = 445

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 141/338 (41%), Positives = 209/338 (61%), Gaps = 3/338 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P+D    L          S   P + RQ + +    GIR I+   P+  GQ
Sbjct: 99  GRVLDGLGQPLDLLGKLTGVQQQTPSNSSYNPLL-RQPISQALDVGIRAINSLLPIGRGQ 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAGSG+GKS LL M  R    D V++ L+GERGREVREFIE  LG+   K++VV+ 
Sbjct: 158 RLGLFAGSGVGKSMLLGMMTRFTEADVVVVGLIGERGREVREFIEQTLGEEGRKRAVVIA 217

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D +P++R  A + +  IA  F  +G  VLL++DS+TR+A + REIA + GE P  +G
Sbjct: 218 APADTTPLMRLRAMVLSHEIACGFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKG 277

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP S F++LP L+E  G  +  +G +TA  +VL +GD+  DP+AD+ R+ILDGH+VL+R 
Sbjct: 278 YPPSAFAKLPHLVEMAGNGQHPQGTLTAFYTVLTEGDDQQDPVADAARAILDGHVVLSRK 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE+G +P +D  ASVSRLA +  S D       + HL+ R+ E R++  +GGY+ G D 
Sbjct: 338 LAEQGHFPAIDINASVSRLATQIASQDNLSQSHVVRHLLSRYNEVRELLPLGGYQAGHDQ 397

Query: 402 ILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
            +D AV     I  FL+Q  ++ +S E    ++ + ++
Sbjct: 398 EMDLAVRHYRDIAAFLRQHMNENISREASLTQLAQLME 435


>gi|300693367|ref|YP_003749340.1| flii: flagellar biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum PSI07]
 gi|299075404|emb|CBJ34699.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum PSI07]
          Length = 481

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 142/325 (43%), Positives = 200/325 (61%), Gaps = 9/325 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLC 159
           GRV++A G+P+DG   LG  +  +   S  P  +N   R+ +E     G+R I+    + 
Sbjct: 138 GRVVDANGEPLDGKGPLGTHE-ELAWGSLAPAPLNPLKRKSIEHVLDVGVRAINGLLTVG 196

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S 
Sbjct: 197 QGQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSA 256

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P 
Sbjct: 257 VVAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPA 316

Query: 279 ARGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP S F++LP L+ER G     +    G+ITA  +VL +GD+  DPIAD+ R+ILDG
Sbjct: 317 TKGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDG 376

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H VL+R LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G 
Sbjct: 377 HFVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGA 436

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D + D+A+ + P +  FL+Q
Sbjct: 437 YARGSDPMTDQAIARYPNMEGFLQQ 461


>gi|149928159|ref|ZP_01916405.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Limnobacter sp. MED105]
 gi|149823144|gb|EDM82382.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Limnobacter sp. MED105]
          Length = 468

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 147/341 (43%), Positives = 202/341 (59%), Gaps = 13/341 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP----AMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+++ G+P+D       G+L  E  S +       + R+ + +    G+R I+    +
Sbjct: 124 GRVVDSNGRPLDT-----LGELKFEKRSPLAARPINPLEREPITEPLDVGVRAINALLTV 178

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
             GQRIG+ AGSG+GKS LL M AR    D+V++ L+GERGREV+EFIE  LG+  LK+S
Sbjct: 179 GRGQRIGLMAGSGVGKSVLLGMMARYTKADRVVVGLIGERGREVKEFIEQILGEEGLKRS 238

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VV+ A +D SP+LR         +AE+F  +G NVL+I+DS+TR+A + REIA   GE P
Sbjct: 239 VVIAAPADVSPLLRMQGAAYTQVVAEHFRDQGHNVLMIMDSLTRYAMAQREIALAIGEPP 298

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP L+ER G   K  G+ITA  +VL +GD+  DPIADS R+ILDGHIV
Sbjct: 299 ATKGYPPSVFAKLPTLVERAGNGRKGAGSITAFYTVLTEGDDQQDPIADSARAILDGHIV 358

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R LAE G YP +D   S+SR       A        L     R +  RD+  +G Y P
Sbjct: 359 LSRQLAESGHYPAIDIEQSISRAMHNIVPAGHLNAARGLKAAFSRVQRNRDLITVGAYSP 418

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           G D  LD ++   P I + L+QS  + +S   F E    LQ
Sbjct: 419 GADPQLDHSLALYPKIENLLQQSMLESAS---FDEALAGLQ 456


>gi|161503491|ref|YP_001570603.1| type III secretion system ATPase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864838|gb|ABX21461.1| hypothetical protein SARI_01567 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 433

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 150/337 (44%), Positives = 210/337 (62%), Gaps = 8/337 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+  G+P+DG +         + M   PPAM R+ + +   TGIR ID       GQ
Sbjct: 99  GRVIDGFGRPLDGSELPEVCWKDYDAMP--PPAMVRRPMTQPLMTGIRAIDSVATCGEGQ 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L  ++ K+ V+VV
Sbjct: 157 RVGIFSAPGVGKSTLLAMLCNAPGADVNVLVLIGERGREVREFIDFTLTKESRKRCVIVV 216

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD   + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  
Sbjct: 217 ATSDRPALERVRALFVATTIAEFFRDHGKRVVLLADSLTRYARAAREIALAAGETAVSGE 276

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R 
Sbjct: 277 YPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRR 334

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D LA++SR+     S + ++L ++L   +  +++   +  IG Y+ GVD 
Sbjct: 335 LAEMGHYPAIDVLATLSRVFPAVTSPEHRQLATTLRRHLALYQDVELLIRIGEYQRGVDA 394

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             DKA+   P I  FL+QS  ++   ++  E   KLQ
Sbjct: 395 AADKAIDTYPNICTFLRQSKDEVCGPELLIE---KLQ 428


>gi|167567954|ref|ZP_02360870.1| type III secretion system ATPase [Burkholderia oklahomensis EO147]
 gi|167573172|ref|ZP_02366046.1| type III secretion system ATPase [Burkholderia oklahomensis C6786]
          Length = 449

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 154/377 (40%), Positives = 224/377 (59%), Gaps = 8/377 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D+  + P     +IS    V   G    I       GRVI+ LG+P+DG   +
Sbjct: 70  EVVGFTRDVALLSPFSQLGQISRATQVIGLGHPLSIPVGDALLGRVIDGLGEPLDGGPPI 129

Query: 120 GKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                +++ ++  PP  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 130 ASE--TLQPLTAAPPDPMSRRMIDVPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  LG D + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFVELILGPDGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G    E G+ITA+ +VL + D+ +DP+A+ VR ILDGH++L+R +A + +YP +D LAS+
Sbjct: 308 G--MGETGSITALYTVLAEDDSGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLASL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 366 SRVMPLVVDDGHMRATARIRELMAQHREVEVLLQIGEYKAGANPLADEAIAKADAIRAFF 425

Query: 418 KQSPSDLS-SEDVFQEI 433
            Q   D S +EDV   +
Sbjct: 426 SQRTDDFSAAEDVVARL 442


>gi|315585806|gb|ADU40187.1| H(+)-transporting two-sector ATPase [Helicobacter pylori 35A]
          Length = 434

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   ++ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|138894743|ref|YP_001125196.1| flagellum-specific ATP synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196247636|ref|ZP_03146338.1| flagellar protein export ATPase FliI [Geobacillus sp. G11MC16]
 gi|134266256|gb|ABO66451.1| Flagellar-specific ATP synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212420|gb|EDY07177.1| flagellar protein export ATPase FliI [Geobacillus sp. G11MC16]
          Length = 423

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 152/379 (40%), Positives = 224/379 (59%), Gaps = 7/379 (1%)

Query: 45  LGDFV-VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACW 101
           +GD   +H+      +  +V+  +   V + P      I+ G LV   G+   +      
Sbjct: 25  IGDLCYIHETSGGRKIPAEVVGFHEQHVLLMPFSSMAHIAPGCLVEATGKPLEVYVGDAL 84

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G V++ +G+P+DG  +L  G   + +    P  + R  + +  + G+RVID    +  G
Sbjct: 85  IGTVLDPIGRPLDGS-ALPLGLKPVSVERDPPNPLARPPIAEPLEVGVRVIDSLLAVGKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKSTL+ M AR    D  +I+L+GERGREVREF+E  LG + L +SVVV
Sbjct: 144 QRVGIFAGSGVGKSTLMGMIARRTSADVNVIALIGERGREVREFLERDLGPEGLARSVVV 203

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           VATSD+  ++R     TA  IAEYF  +G +V+L++DS+TR A + REI    GE P  +
Sbjct: 204 VATSDQPALMRVKGAYTATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTK 263

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  SVF+ LP+LLER G      G ITA  +VLVDGD+ N+PIAD+VR ILDGH VL R
Sbjct: 264 GYTPSVFALLPKLLERAG--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLER 321

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LA +G+YP ++ L SVSR+     SA+ ++  + +  L+  + ++ D+  IG Y+ G  
Sbjct: 322 QLANKGQYPAINVLKSVSRVMPHIISAEHREAANRVRRLLSTYIDSEDLIQIGAYKHGSS 381

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             +D+A+   P I  F +Q
Sbjct: 382 REIDEAIQFYPQIMAFCRQ 400


>gi|109946732|ref|YP_663960.1| flagellum-specific ATP synthase [Helicobacter acinonychis str.
           Sheeba]
 gi|109713953|emb|CAJ98961.1| flagellum-specific ATP synthase [Helicobacter acinonychis str.
           Sheeba]
          Length = 434

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 229/396 (57%), Gaps = 7/396 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+ +  +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVVEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGHNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLVPIKVIALIGERGREIPEFIEKNLQGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEEGKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LD+A+++  ++  FL Q  + L     F++  K+L+
Sbjct: 398 LDEAINKKALMEQFLVQDENALQP---FEQSAKQLE 430


>gi|317010211|gb|ADU80791.1| flagellum-specific ATP synthase [Helicobacter pylori India7]
          Length = 434

 Score =  262 bits (670), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   ++ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|312883882|ref|ZP_07743599.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368340|gb|EFP95875.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 459

 Score =  262 bits (670), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 149/358 (41%), Positives = 213/358 (59%), Gaps = 23/358 (6%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS-MEIMS 130
           + P+G   E+ +GD +               G +++ LG+P DG  + GK   +   +  
Sbjct: 107 VSPLGKMHEVGVGDHLL--------------GTILDGLGRPFDG--TQGKEPSAWYPVYR 150

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  
Sbjct: 151 DAPPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVT 210

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +++L+GERGREVREFIE  LG+  + +SV+VVATSD   + R  A   A +IAEYF  +G
Sbjct: 211 VLALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQG 270

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA
Sbjct: 271 KRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITA 328

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      
Sbjct: 329 LYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKSH 388

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424
           +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    PS+L
Sbjct: 389 QTSAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSEL 446


>gi|238798574|ref|ZP_04642051.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
 gi|238717594|gb|EEQ09433.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
          Length = 454

 Score =  262 bits (670), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 144/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  ++  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 416 LLDKAIALYPQMEIFLQQGMYERSSYEDACQHL 448


>gi|298735620|ref|YP_003728145.1| flagellum-specific ATP synthase [Helicobacter pylori B8]
 gi|298354809|emb|CBI65681.1| flagellum-specific ATP synthase [Helicobacter pylori B8]
          Length = 434

 Score =  262 bits (670), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   S+ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + +EI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQKEIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|1890178|emb|CAA69911.1| F0/F1-ATPase [Helicobacter pylori]
          Length = 434

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   S+ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID    L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|114330755|ref|YP_746977.1| flagellar protein export ATPase FliI [Nitrosomonas eutropha C91]
 gi|114307769|gb|ABI59012.1| flagellar protein export ATPase FliI [Nitrosomonas eutropha C91]
          Length = 468

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 202/326 (61%), Gaps = 2/326 (0%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           IS      GRV+N +G+P+D    L  G  ++ +  +    + R  +EK    G+R I+ 
Sbjct: 124 ISVGPELLGRVLNGVGEPLDRLGPLQCGH-NVPLYGRPFNPLERAPIEKILDVGVRAINT 182

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213
              +  GQR+G+FAGSG+GKS LL M AR    D ++++L+GERGREV+EFIE  LG+  
Sbjct: 183 LLSVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVALIGERGREVQEFIETILGEEG 242

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L +SVVV A +D SP++R      A  IAEYF  +G +VLLI+DS+TRFA + REI+   
Sbjct: 243 LARSVVVAAPADTSPLMRLHGAAYATAIAEYFRDEGKHVLLIMDSLTRFAMAQREISLAI 302

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF+ LP+L+ER G   +  G+ITA  +VL + D+ NDPIAD+ R+ILD
Sbjct: 303 GEPPATKGYPPSVFARLPQLVERAGNGRRGSGSITAFYTVLAENDDPNDPIADNARAILD 362

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LA+ G YP +D  +S+SR+     + ++         L  R++ + D+  +G
Sbjct: 363 GHIVLSRHLADAGHYPAIDIESSISRVMASLVTREQLGQAQRFKALYSRYQRSHDLISVG 422

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D  LD+A+   P +  FL+Q
Sbjct: 423 AYISGTDPQLDQAIALYPALESFLQQ 448


>gi|238784728|ref|ZP_04628732.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
 gi|238714407|gb|EEQ06415.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
          Length = 454

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 144/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  ++  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 416 LLDKAIALYPQMEIFLQQGMYERSSYEDACQHL 448


>gi|317486822|ref|ZP_07945638.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Bilophila wadsworthia 3_1_6]
 gi|316921985|gb|EFV43255.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Bilophila wadsworthia 3_1_6]
          Length = 438

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 155/380 (40%), Positives = 223/380 (58%), Gaps = 8/380 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
            +V+     +  + P+G  + IS    V   G     P      GRV+N LG PIDG   
Sbjct: 60  AEVVGFVKQVALLTPLGDLQGISPATEVIPTGEIHSVPVGEDLLGRVLNGLGDPIDGGPP 119

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L K      + +  P  M R+ +++    G+RV+D       GQR+G+FA +G GKSTLL
Sbjct: 120 L-KPRTHYPVYADPPNPMLRKIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLL 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
           S   +    D  +++L+GERGREVREFIE+ LG +  KK+V+VV+TSD S + R  A  T
Sbjct: 179 SSIIKGCSADVCVLALIGERGREVREFIENDLGPEGRKKAVLVVSTSDRSSMERLKAAYT 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  +AEYF  +  +VLL++DS+TRF  + REI   +GE P  RG+P SVFS LP+L+ER 
Sbjct: 239 ATAVAEYFRDQHKSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPKLMERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA+ +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP +D  ASV
Sbjct: 299 GNSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAIDVQASV 356

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+ +   + + KK   +L  ++ +F E   +  IG Y+ G D   D A+ ++  +  FL
Sbjct: 357 SRVMNAIVTKEHKKAAQALRKVLAKFAEVELLVQIGEYKKGSDKEADDALARINAVNAFL 416

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q    L  +  F+E  + L
Sbjct: 417 RQG---LDEKSTFEETLQAL 433


>gi|161502906|ref|YP_001570018.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864253|gb|ABX20876.1| hypothetical protein SARI_00965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 456

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 194/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  +    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTTETGALITPPFNP-LQRTPIEHVLDTGVRAINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAITLWPQLEAFLQQ 434


>gi|283832664|ref|ZP_06352405.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
 gi|291072338|gb|EFE10447.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
          Length = 456

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  +    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPAPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRHLAEAGHYPAIDIEASISRAMTALISEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434


>gi|317182625|dbj|BAJ60409.1| flagellum-specific ATP synthase [Helicobacter pylori F57]
          Length = 434

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|260858262|ref|YP_003232153.1| T3SS structure protein EscN [Escherichia coli O26:H11 str. 11368]
 gi|257756911|dbj|BAI28413.1| T3SS structure protein EscN [Escherichia coli O26:H11 str. 11368]
          Length = 446

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 149/372 (40%), Positives = 215/372 (57%), Gaps = 3/372 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+++ +G+P+ 
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            + +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA TIAE+F  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVF+ LP+LL
Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFASLPKLL 303

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D  
Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+     I 
Sbjct: 362 LSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQ 421

Query: 415 DFLKQSPSDLSS 426
            F++QS  D+SS
Sbjct: 422 SFIQQSTKDISS 433


>gi|108563771|ref|YP_628087.1| flagellum-specific ATP synthase [Helicobacter pylori HPAG1]
 gi|107837544|gb|ABF85413.1| flagellum-specific ATP synthase [Helicobacter pylori HPAG1]
          Length = 434

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKNDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQIGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|6066711|emb|CAB58257.1| HrpE protein [Ralstonia solanacearum]
 gi|1097290|prf||2113360R hrpE gene
          Length = 439

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 199/327 (60%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P DG   L   +  + + +  P  M R+ VE    TG+RVID    L  GQ
Sbjct: 104 GRVLDGHGRPADGGPPLDVVEY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FA +G+GKSTL+ MFAR    D  +I L+GERGREVREFIE  LG + +++SVVV 
Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD + + R  A      +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 223 ATSDRTAVERAKAAYVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+ELPRLLER G S    G+ITA  +VL + ++ NDP+A+ VR ILDGH++L+R 
Sbjct: 283 FPPSVFAELPRLLERAGMS--AAGSITAHYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A   RYP +D L S+SR+  +    D       +  L+ ++ E   +  +G Y+ G D 
Sbjct: 341 IAARNRYPAIDILNSLSRVMTQVMPRDHCDAAGRMRQLLAKYNEVVTLLQMGEYKEGSDP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           + D AV     +  FL+Q   +  S D
Sbjct: 401 VADAAVQWNDWMESFLRQRTDEWCSPD 427


>gi|332674186|gb|AEE71003.1| flagellar protein export ATPase FliI [Helicobacter pylori 83]
          Length = 434

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   ++ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGTECMGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLHARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|332140585|ref|YP_004426323.1| flagellum-specific ATP synthase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550607|gb|AEA97325.1| flagellum-specific ATP synthase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 444

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 151/364 (41%), Positives = 214/364 (58%), Gaps = 9/364 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           +V+    DI Y+ P      I  G  V    R    P      GRV++  G+P+DG   L
Sbjct: 60  EVVGFGDDITYLMPTEAVRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDG---L 116

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           G+ D      +  PP MN   R+ +      G+R I+    +  GQR+G+FAGSG+GKS 
Sbjct: 117 GEIDAEARAPTTRPP-MNPLIRRPINAPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           LL M  R    D V++ LVGERGREV+EFI D L +   +++VVV A +D SP++R    
Sbjct: 176 LLGMMTRGCEADVVVVGLVGERGREVKEFIHDILTEEERQRAVVVAAPADTSPLMRLKGC 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            TAVTIAEYF  KG  VLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+E
Sbjct: 236 ETAVTIAEYFRDKGMKVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G   + +G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LA+ G YP +D  A
Sbjct: 296 RAGNGSERQGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEA 355

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+     S + + +   +  +   +++ +D+  IG Y  G D  +D A+   P I  
Sbjct: 356 SISRVMPMVVSEEHQLMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINA 415

Query: 416 FLKQ 419
            L+Q
Sbjct: 416 LLQQ 419


>gi|227355983|ref|ZP_03840375.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
 gi|227163971|gb|EEI48873.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
          Length = 457

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/365 (41%), Positives = 210/365 (57%), Gaps = 23/365 (6%)

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP- 134
           G G ++ LGD +               GRV++  G P+DG   L   D S       PP 
Sbjct: 104 GEGRQLPLGDALL--------------GRVLDGSGDPLDG---LPPPDTSYRAPLITPPI 146

Query: 135 -AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ 
Sbjct: 147 NPLQRTPITDVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARFTQADVIVVG 206

Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV++FIE+ LG + L +SVVV A +D SP+LR      A  IAE F  +G +V
Sbjct: 207 LIGERGREVKDFIENILGKEGLARSVVVAAPADVSPLLRMQGASYATRIAEDFRDRGKHV 266

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LLI+DS+TR++ + REIA   GE P  +GYP SVF++LP L+ER G      G+ITA  +
Sbjct: 267 LLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGVDGGGSITAFYT 326

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR           + 
Sbjct: 327 VLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTSLIDKTHYRR 386

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           V     L+  ++  RD+  +G Y  G D +LDKA+   P +  FL+Q   D+  +  +Q 
Sbjct: 387 VQVFKQLLSSYQRNRDLINVGAYAAGSDPMLDKAIALYPSLAKFLQQ---DIQEQCSYQH 443

Query: 433 ITKKL 437
             ++L
Sbjct: 444 ACEQL 448


>gi|217034565|ref|ZP_03439974.1| hypothetical protein HP9810_874g22 [Helicobacter pylori 98-10]
 gi|216942985|gb|EEC22468.1| hypothetical protein HP9810_874g22 [Helicobacter pylori 98-10]
          Length = 434

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISEPQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILK 434


>gi|297621830|ref|YP_003709967.1| type III secretion cytoplasmic ATPase SctN [Waddlia chondrophila
           WSU 86-1044]
 gi|297377131|gb|ADI38961.1| type III secretion cytoplasmic ATPase SctN [Waddlia chondrophila
           WSU 86-1044]
          Length = 438

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/386 (41%), Positives = 228/386 (59%), Gaps = 15/386 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
            +V+    D V++ P  +GE   +G   +++       +       GRV+N LG+P+D +
Sbjct: 58  AEVVGFTRDEVFLSP--LGEMTGIGPSSEVIPTRLPLHVKVGDALLGRVLNGLGEPLDTN 115

Query: 117 DSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KG L +     ++   P  + RQRV +    G+RVID       GQR+G+FA +G 
Sbjct: 116 T---KGPLVLNETAPVIQSPPDPLKRQRVSEPISVGVRVIDGTLTTGLGQRVGIFAAAGG 172

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKSTLL M AR+   D  +ISLVGERGRE+R+FIE  LG + LKKSV+V++TSD+S  LR
Sbjct: 173 GKSTLLGMIARNADADINVISLVGERGRELRDFIEKDLGPEGLKKSVLVISTSDQSAQLR 232

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A  IAEYF  KG +V+L++DS+TRFA +IRE+   +GE P   GY  SVFS LP
Sbjct: 233 LNAAYVATAIAEYFRDKGKSVILMMDSVTRFARAIREVGLAAGEPPARAGYTPSVFSTLP 292

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           +LLER G S  + G+ITA  ++LV GD+ N+P+AD VRSILDGHI+L+  LA +  YP V
Sbjct: 293 KLLERSGRS--DVGSITAFYTILVAGDDMNEPVADEVRSILDGHIILSAELAHKYHYPAV 350

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LAS SR+     S +   L   +  ++  +++   +  IG Y+ G D   D A+  + 
Sbjct: 351 DVLASKSRVMQTIVSEEHLSLAGKINEVLANYKKNELLIKIGEYKRGSDKAGDFAIDHID 410

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            + +FLKQ   +  S D   ++ + L
Sbjct: 411 KVNNFLKQGIEEECSWDETMQLLRSL 436


>gi|317011553|gb|ADU85300.1| flagellum-specific ATP synthase [Helicobacter pylori SouthAfrica7]
          Length = 434

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/396 (39%), Positives = 227/396 (57%), Gaps = 7/396 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   S+ +G V+ +  +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVVEKEQFGFTPFNFIEGSRAGDKVLFLKEGLNFPVGHNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+V A
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLQGDLSSCVLVAA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEEGKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPPV+ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPVNILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L     F++  K+L+
Sbjct: 398 LDEAISKKALMEQFLAQDENALQP---FEQSVKQLE 430


>gi|197285492|ref|YP_002151364.1| flagellum-specific ATP synthase [Proteus mirabilis HI4320]
 gi|194682979|emb|CAR43407.1| flagellum-specific ATP synthase [Proteus mirabilis HI4320]
          Length = 457

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/365 (41%), Positives = 210/365 (57%), Gaps = 23/365 (6%)

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP- 134
           G G ++ LGD +               GRV++  G P+DG   L   D S       PP 
Sbjct: 104 GEGRQLPLGDALL--------------GRVLDGSGDPLDG---LPPPDTSYRAPLITPPI 146

Query: 135 -AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ 
Sbjct: 147 NPLQRTPITDVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARFTQADVIVVG 206

Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV++FIE+ LG + L +SVVV A +D SP+LR      A  IAE F  +G +V
Sbjct: 207 LIGERGREVKDFIENILGKEGLARSVVVAAPADVSPLLRMQGASYATRIAEDFRDRGKHV 266

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LLI+DS+TR++ + REIA   GE P  +GYP SVF++LP L+ER G      G+ITA  +
Sbjct: 267 LLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGVDGGGSITAFYT 326

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR           + 
Sbjct: 327 VLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTSLIDKTHYRR 386

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           V     L+  ++  RD+  +G Y  G D +LDKA+   P +  FL+Q   D+  +  +Q 
Sbjct: 387 VQVFKQLLSSYQRNRDLINVGAYATGSDPMLDKAIALYPSLAKFLQQ---DIQEQCSYQH 443

Query: 433 ITKKL 437
             ++L
Sbjct: 444 ACEQL 448


>gi|163856455|ref|YP_001630753.1| flagellar biosynthesis ATPase FliI [Bordetella petrii DSM 12804]
 gi|163260183|emb|CAP42485.1| flagellar biosynthesis ATPase FliI [Bordetella petrii]
          Length = 482

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 202/335 (60%), Gaps = 6/335 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   +L+      + P ++R  ++     G+R I+    + 
Sbjct: 133 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAHPINP-LSRAPIDTVLDVGVRAINGLLTVG 191

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG D L +SV
Sbjct: 192 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKEFIEHNLGADGLARSV 251

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 252 VVAAPADVSPLLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 311

Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP SVF+ LP L+ER G   P    K G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 312 TKGYPPSVFARLPALVERAGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 371

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H+VL+R LAE G YP +D  AS+SR      S  +  +V      + R++  RD+  +G 
Sbjct: 372 HVVLSRHLAEAGHYPAIDIEASISRAMTSLISDQQYAVVRRFKQTLSRYQRNRDLIAVGA 431

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           Y  G D  LD A+ + P +  FL+Q   D  S D 
Sbjct: 432 YSAGNDPQLDDAIARYPRLEAFLQQDIGDSVSYDA 466


>gi|119953087|ref|YP_945296.1| flagellum-specific ATP synthase [Borrelia turicatae 91E135]
 gi|119861858|gb|AAX17626.1| flagellum-specific ATP synthase [Borrelia turicatae 91E135]
          Length = 436

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/387 (39%), Positives = 235/387 (60%), Gaps = 6/387 (1%)

Query: 36  VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           V  L     +GD  ++ Q        +V+ +N   V +      + I +GD V   G+  
Sbjct: 33  VESLGPKCGIGDLCLIEQRSGKKIYAEVLGLNGSFVNLMAYEGFDGIEIGDQVCSLGKKL 92

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I+ S    GRVI++LG+PID               S + P ++R    +   TG++V+D
Sbjct: 93  QINLSDELLGRVIDSLGRPIDNKGQFFCNYYKELSFSNINP-LSRGVFSEQIVTGVKVLD 151

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERGRE+ EFI+  LG+ 
Sbjct: 152 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERGRELNEFIKYDLGEE 211

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             K+SV++V+TSD SPI R     TA  IAEYF   G +V+L+ DSITRFA++ REI+ +
Sbjct: 212 CFKRSVLIVSTSDASPIARYKGAYTATLIAEYFRDCGMDVMLLFDSITRFANAKREISLS 271

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE P  +GYP SVF E+P LLER G +   KG+IT   +VLV+GD+  +PIAD+++++L
Sbjct: 272 MGEPPATKGYPPSVFVEIPILLERSGLN--SKGSITGFYTVLVEGDDFTEPIADNMKAVL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHI+L+R L++ G YP V+ L+S SR   +  + +++KL+S + +L+  ++   D+   
Sbjct: 330 DGHIILDRDLSDRGIYPSVNILSSTSRSLHRIVNFEKQKLISKIRNLLSIYKSYEDLIKT 389

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           G Y  G +  +D AV + P I DFL Q
Sbjct: 390 GIYIKGSNKEVDLAVAKYPKIIDFLSQ 416


>gi|317179598|dbj|BAJ57386.1| flagellum-specific ATP synthase [Helicobacter pylori F30]
          Length = 434

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   ++ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|13475302|ref|NP_106866.1| ATP synthase in type III secretion system, hrcN [Mesorhizobium loti
           MAFF303099]
 gi|14026053|dbj|BAB52652.1| ATP synthase in type III secretion system; HrcN [Mesorhizobium loti
           MAFF303099]
          Length = 452

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/374 (41%), Positives = 220/374 (58%), Gaps = 8/374 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           +VI +  D V + P+G    +S    V   GR R  P      GRVI++  +P+DG   +
Sbjct: 75  EVIGLLDDGVLLTPIGDLVGLSSRAEVVATGRMREVPVGNDLLGRVIDSRCRPLDGKGQI 134

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +  +  + P  M R+ +E+    G+RV+D       GQRIG++   G GKSTLLS
Sbjct: 135 ETTE-TRPLHGRAPNPMTRRMIERPLPLGVRVLDGLLTCGEGQRIGIYGEPGGGKSTLLS 193

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
              +    D VI++L+GERGREVREFIE +LG+  L+++VVVV TSD S + R      A
Sbjct: 194 QIVKGAAADVVIVALIGERGREVREFIERHLGEEGLRRAVVVVETSDRSAVQRAQCAPMA 253

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G  V L+LDS+TRF  ++REI   +GE P  RG+P SVFS LP LLER G
Sbjct: 254 TALAEYFREQGLRVALMLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFSMLPGLLERAG 313

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            SE+  G+ITA  +VLV+GD   DPIA+  R ILDGH+VL+R++A    +P +D L S S
Sbjct: 314 MSER--GSITAFYTVLVEGDGTGDPIAEESRGILDGHVVLSRAIAARSHFPAIDVLQSRS 371

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ D   S   +K  S    L+ R  ET  +  +G Y+ G D + D+AV  +  + +FL+
Sbjct: 372 RVMDAVVSRTHRKAASFFRELLSRHAETEFLINVGEYKQGGDPLTDRAVESIDELREFLR 431

Query: 419 QSPSDLSSEDVFQE 432
           QS  ++S    F+E
Sbjct: 432 QSEDEISG---FEE 442


>gi|34498058|ref|NP_902273.1| type III secretion system ATPase [Chromobacterium violaceum ATCC
           12472]
 gi|34103913|gb|AAQ60273.1| probable type III secretion system ATP synthase [Chromobacterium
           violaceum ATCC 12472]
          Length = 444

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/367 (41%), Positives = 221/367 (60%), Gaps = 21/367 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           + P G   ++ LGD +               GRV++ LG+P+DGD+     +L   +   
Sbjct: 93  VRPSGSPHQLRLGDFLL--------------GRVVDGLGRPLDGDELPADSELR-SLDGP 137

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  + RQ ++     G+R ID       GQRIG+FA +G GKSTLL M       D ++
Sbjct: 138 APNPLTRQLIDTPLPLGVRAIDGLLTCGMGQRIGIFAAAGGGKSTLLGMICDGSLADVIV 197

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGREVREF+E  L +  + +S+VVV+TSD   + R  A  TA  IAE+F  +G 
Sbjct: 198 LALIGERGREVREFLEHTLSEEARSRSIVVVSTSDRPALERLKAAYTATAIAEHFRDQGK 257

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI   +GE   A GYP S F+ LPRLLER GP+E   G+IT +
Sbjct: 258 NVLLMMDSLTRFARASREIGLAAGEPAAAGGYPPSFFARLPRLLERAGPAET--GSITGI 315

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GDN N+P+AD VRSILDGHIVL+R LAE   YP +D  ASVSR+  +  SA+ +
Sbjct: 316 YTVLVEGDNLNEPVADEVRSILDGHIVLSRKLAETNHYPAIDIGASVSRIMGQIVSAEHR 375

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +    L  L+  ++E   +  +G Y+PG D   D+A+ +   I  FL QS   ++ ++ F
Sbjct: 376 QQAGKLRRLMAAYKEIELLVRVGEYQPGQDAEADEALERKDAIRQFLCQS---VTEKNDF 432

Query: 431 QEITKKL 437
           +E  ++L
Sbjct: 433 EETLEQL 439


>gi|289624378|ref|ZP_06457332.1| type III secretion component, putative [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|330868638|gb|EGH03347.1| type III secretion component [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 442

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 161/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG        +    +   PPA  +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E  L    + ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP  +  G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSSIEAFLRQPPSE 426


>gi|56413115|ref|YP_150190.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362041|ref|YP_002141678.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56127372|gb|AAV76878.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093518|emb|CAR58979.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 456

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/326 (44%), Positives = 196/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHI L+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G
Sbjct: 349 GHIALSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  FL+Q
Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434


>gi|210135582|ref|YP_002302021.1| flagellum-specific ATP synthase [Helicobacter pylori P12]
 gi|308185180|ref|YP_003929313.1| flagellum-specific ATP synthase [Helicobacter pylori SJM180]
 gi|210133550|gb|ACJ08541.1| flagellar protein export ATPase FliI [Helicobacter pylori P12]
 gi|308061100|gb|ADO02996.1| flagellum-specific ATP synthase [Helicobacter pylori SJM180]
          Length = 434

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/397 (39%), Positives = 227/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   S+ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID    L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLVQDENALQPFEQSFQQLEEILR 434


>gi|317133485|ref|YP_004092799.1| ATPase, FliI/YscN family [Ethanoligenens harbinense YUAN-3]
 gi|315471464|gb|ADU28068.1| ATPase, FliI/YscN family [Ethanoligenens harbinense YUAN-3]
          Length = 433

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/324 (44%), Positives = 203/324 (62%), Gaps = 12/324 (3%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPA--MNRQRVEKGFKTGIRVIDIFT 156
             GRV++ +G PIDG     KG ++ E   +  V PA  + R R+++    G++VID   
Sbjct: 97  MVGRVLDGVGTPIDG-----KGPIASEAHYLIDVEPANPLQRPRIKERMPLGVKVIDGLL 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLK 215
               GQRIG+FAGSG+GKSTL+ M AR+   D  +I+LVGERGRE+R+F+E D   + + 
Sbjct: 152 TCGKGQRIGIFAGSGVGKSTLMGMIARNAQADVNVIALVGERGRELRDFMEKDLQAEGMA 211

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+VVATSD   + R    L A  +AE+F  KG NV+L++DS+TRFA + REI   +GE
Sbjct: 212 RTVLVVATSDRPAMARVKCALVATAVAEFFRDKGKNVMLMMDSLTRFAMAQREIGLATGE 271

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            PVARGY  S+F+ +P+LLER G     KG+IT + +VLV+GD+ N+P+AD+VR ILDGH
Sbjct: 272 PPVARGYTPSIFAVMPKLLERSG--NFNKGSITGIYTVLVEGDDMNEPVADTVRGILDGH 329

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R+LA    YP +D LAS+SRL          +L   +  L+  +E   D+  IG Y
Sbjct: 330 IVLTRALAMRNHYPAIDVLASISRLMPDIADPAHMELAGKMRRLMATYENYADLISIGAY 389

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
           +PG    +D A+     I  FL Q
Sbjct: 390 KPGSSEEVDTAIRYHKAIETFLCQ 413


>gi|307822875|ref|ZP_07653106.1| flagellar protein export ATPase FliI [Methylobacter tundripaludum
           SV96]
 gi|307736479|gb|EFO07325.1| flagellar protein export ATPase FliI [Methylobacter tundripaludum
           SV96]
          Length = 454

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/339 (41%), Positives = 212/339 (62%), Gaps = 7/339 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G  ID    L K D  + +       ++R+ + +    G+R I+    +  GQ
Sbjct: 111 GRVLDGAGNAIDDKGPL-KTDAQISLNGVPINPLSRRPIREPLDVGVRAINSILSVGRGQ 169

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAG+G+GKS LL M  +    D V++ L+GERGREV EF+   LG+  LK++VVVV
Sbjct: 170 RMGLFAGTGVGKSVLLGMMTKFTTADVVVVGLIGERGREVNEFVLKTLGEEGLKRAVVVV 229

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           + +D  P++R  A L + +IAEYF  +G +VLL++DS+TRFA + REIA +  E P  +G
Sbjct: 230 SPADCPPLMRVHAALLSTSIAEYFRDQGLDVLLLMDSLTRFAQAHREIALSIDEPPATKG 289

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G ++   G+ITA  +VL +GD+ NDPIAD+ R +LDGH++L+RS
Sbjct: 290 YPPSVFAKLPHLVERAGNADHGGGSITAFYTVLAEGDDTNDPIADAARGVLDGHVILSRS 349

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G +P +D  AS+SR+      A   ++   L  L   +++ RD+  +G Y+PG D 
Sbjct: 350 LAESGHFPAIDIEASISRVMPDIIDAGHLQMARELRRLYSLYQQNRDLISVGAYQPGSDP 409

Query: 402 ILDKAVHQVPIIYDFLKQ---SPSDLSSEDVFQEITKKL 437
            +DKA+ + P I DFL+Q    P D++     QE+   L
Sbjct: 410 RIDKAIERNPAILDFLQQDMDEPVDINRS--LQELATLL 446


>gi|302037607|ref|YP_003797929.1| ATPase FliI [Candidatus Nitrospira defluvii]
 gi|300605671|emb|CBK42004.1| ATPase FliI [Candidatus Nitrospira defluvii]
          Length = 435

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/376 (42%), Positives = 221/376 (58%), Gaps = 10/376 (2%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVIN 107
           +  +G +   + +V+    D V + P+G  + I  G  V   G     P      GR+ +
Sbjct: 42  ITREGGHGAVMAEVVGFREDRVLLMPLGEMQGIGPGSRVVMKGHVASVPVGPQMLGRIFD 101

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P+DG   L + D+ + + +     ++R R+ +    GIR I+       GQ+IGVF
Sbjct: 102 GLGHPLDGLPPL-RTDVQVPLYAPPLNPLHRARITQPVDLGIRAINALLTCGQGQKIGVF 160

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDE 226
           AGSG+GKS LL M +R    D  +I+LVGERGREV+EF+E D   +   +S+VVVATSD+
Sbjct: 161 AGSGVGKSVLLGMISRYTQADVRVIALVGERGREVKEFLERDLTPEARARSIVVVATSDQ 220

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            P++R    L A  IAEYF   G +VLL++DS++R A+S RE+    GE P  +GY  SV
Sbjct: 221 PPLVRIRGALVATAIAEYFRDCGKHVLLMMDSLSRLAYSQREVGLAIGEPPTTKGYTPSV 280

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ LP+LLER+GP++   G+IT + +VLVDGD+ NDP+AD+VRSILDGHIVL+R LA   
Sbjct: 281 FAVLPKLLERVGPAQS-GGSITGLYTVLVDGDDLNDPVADAVRSILDGHIVLSRELAARN 339

Query: 347 RYPPVDPLASVSR-LADKAWSAD--EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            +P +D L S SR + D    A     +LV   T L  R E   D+  +G Y+PG    L
Sbjct: 340 HFPAIDILQSTSRVMRDIVTPAHYAAGRLVLERTALYRRSE---DLITLGAYKPGTSKDL 396

Query: 404 DKAVHQVPIIYDFLKQ 419
           DKAV     I  FL+Q
Sbjct: 397 DKAVSAHEGITAFLRQ 412


>gi|297380580|gb|ADI35467.1| ATPase FliI/YscN family [Helicobacter pylori v225d]
          Length = 434

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLHARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|329901248|ref|ZP_08272773.1| Flagellum-specific ATP synthase FliI [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549180|gb|EGF33772.1| Flagellum-specific ATP synthase FliI [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 466

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/320 (44%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA--MNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++  G+P+D   +LG  + S      V  A  + R  +      G+R I+    +  
Sbjct: 129 GRVLDGAGRPLD---TLGPLNASSAAPLNVRAANPLTRAPIIDVLDVGVRAINSMLTVGR 185

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVV
Sbjct: 186 GQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARSVV 245

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D  P++R         IAE+F  +G +VL+I+DS+TR+A + REIA   GE P  
Sbjct: 246 VAAPADTPPLMRLQGAAYTTAIAEHFRDQGKHVLMIMDSLTRYAMAQREIALAIGEPPAT 305

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVLN
Sbjct: 306 KGYPPSVFAKLPALVERAGNGREGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLN 365

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D   S+SR      + + +KL   L  L  R++  RD+  +G Y  G 
Sbjct: 366 RQLAEAGHYPAIDIEQSISRAMHSITTPEHQKLTRRLKQLYSRYQRNRDLISVGAYSAGS 425

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D +LD+A+     I DFL+Q
Sbjct: 426 DPVLDEAILLNTRIEDFLQQ 445


>gi|260776481|ref|ZP_05885376.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607704|gb|EEX33969.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 441

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 140/336 (41%), Positives = 210/336 (62%), Gaps = 2/336 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTEKRAAFNADPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G   +E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGQEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  S ++  +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEQILMSKAVRQVLSVCRKNQDLVSIGAYKPGSDP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +D A    P +  +L+Q+  +    D+   + + L
Sbjct: 401 AIDSAFTLKPRLDGYLQQAMKETVPYDMCVNMLRNL 436


>gi|167849985|ref|ZP_02475493.1| type III secretion system ATPase [Burkholderia pseudomallei B7210]
          Length = 625

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/402 (39%), Positives = 229/402 (56%), Gaps = 9/402 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 29  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG+P+DG   L    L   +++  P  M
Sbjct: 87  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 425


>gi|134095079|ref|YP_001100154.1| flagellum-specific ATP synthase [Herminiimonas arsenicoxydans]
          Length = 426

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 196/322 (60%), Gaps = 6/322 (1%)

Query: 101 WCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
             GRV++  G+P+D   SLG      S  +  +    + R  +      G+R I+    +
Sbjct: 88  LLGRVLDGAGRPLD---SLGPLHATHSGPLNVRAANPLTRAPITDVLDVGVRAINSMLTV 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217
             GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +S
Sbjct: 145 GRGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARS 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A +D  P++R         IAE+F  +G +VLLI+DS+TR+A + REIA   GE P
Sbjct: 205 VVVAAPADTPPLMRLQGAAYTTAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP L+ER G  ++  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIV
Sbjct: 265 ATKGYPPSVFAKLPALVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           LNRSLAE G YP +D   S+SR      + + +K    L  L  R++  RD+  +G Y  
Sbjct: 325 LNRSLAEAGHYPAIDIEQSISRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSA 384

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
           G D +LD+A+     I  FL+Q
Sbjct: 385 GSDPVLDEAIALNTKIESFLQQ 406


>gi|308273181|emb|CBX29784.1| Flagellum-specific ATP synthase [uncultured Desulfobacterium sp.]
          Length = 452

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/340 (41%), Positives = 214/340 (62%), Gaps = 6/340 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            + GRVI+ LG+PIDG   +   D    +  +V   + R  + +    GIR I+    + 
Sbjct: 112 AYIGRVIDGLGQPIDGKGEI-TCDTEYPVYGEVINPLQRGIISEVMDVGIRAINSMITVG 170

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            GQRI + AGSG+GKS L+ M AR+   D  II+L+GERGREV+EF+E  LG+  +KKS+
Sbjct: 171 KGQRIAIMAGSGVGKSVLMGMMARNTAADVSIIALIGERGREVKEFVEKKLGEAGMKKSI 230

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ +TSD   ++R  A   A  +AEYF  KG +VLL++DS+TR A S+RE+   +GE P 
Sbjct: 231 VIASTSDTPALIRIRAAYFATALAEYFRDKGLDVLLVMDSVTRVAMSLREVGLAAGEPPT 290

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           ++GY  SVF+++P+LLER G  EK KG+IT + +VLV+GD+ ++P+AD+VRSI+DGHIVL
Sbjct: 291 SKGYTPSVFTQMPKLLERAGNLEK-KGSITGIYNVLVEGDDMSEPVADTVRSIVDGHIVL 349

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+++ +G YP +D +AS+SR+     S+D       L  ++  +++  D+  IG Y+ G
Sbjct: 350 SRAVSHKGHYPAIDVMASISRVMKDIVSSDHYNRSRKLIKILAVYKDAEDLINIGAYQSG 409

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            D  +D A   +  I  FL+Q   + S    F E  ++L 
Sbjct: 410 SDPEIDFAKKMIGRINTFLQQQIDENSG---FDESVQRLN 446


>gi|213419050|ref|ZP_03352116.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 372

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 197/325 (60%), Gaps = 12/325 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E   +TG+R I+ 
Sbjct: 54  ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLETGVRAINA 107

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 108 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 167

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 168 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 227

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 228 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 287

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G
Sbjct: 288 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVG 347

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLK 418
            Y  G D +LDKA+   P +  FL+
Sbjct: 348 AYAKGSDPMLDKAITLWPQLEAFLQ 372


>gi|322432993|ref|YP_004210242.1| ATPase, FliI/YscN family [Acidobacterium sp. MP5ACTX9]
 gi|321165220|gb|ADW70924.1| ATPase, FliI/YscN family [Acidobacterium sp. MP5ACTX9]
          Length = 434

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/395 (38%), Positives = 234/395 (59%), Gaps = 13/395 (3%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCG 103
           + +  +G++    G+V+      +    + + + I  GD +   G     R+ P     G
Sbjct: 46  EIITREGRSFS--GEVVGFRGSTMLTMTLQLPQGIRYGDRIIATGSRPSIRVGPE--LLG 101

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RVI+  G+P+D     G    SM + +  P  ++R  +      G+R ID F     GQR
Sbjct: 102 RVIDGTGEPLDSLGPYGS-RRSMPVDAAAPLPLDRLPIRNTLGCGVRAIDAFITCGRGQR 160

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223
           +G+F GSG+GKSTLL M AR    D  +++L+GERGREV+EF+E    +  KKS++VV+T
Sbjct: 161 LGIFGGSGVGKSTLLGMMARGTEADLTVMALIGERGREVQEFLEVIGEEGRKKSILVVST 220

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           SD+SP+L+  A L A  IAEYF+++G NVLL++DS+TRFA + REI   +GE P ++GY 
Sbjct: 221 SDQSPLLKMRAALAATAIAEYFAAEGKNVLLVVDSLTRFAMAQREIGLAAGEPPTSKGYT 280

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SV + L RL+ER G     KG+ITA  +VL++GD+  DP+ D+VRS+LDGH++L+R+LA
Sbjct: 281 PSVINTLARLVERAG--NFNKGSITAFYTVLMEGDDQQDPVVDTVRSLLDGHVILDRNLA 338

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            +  YPP+  L S+SRL     + +      +L  L+  ++ + D+  IG Y+ G D +L
Sbjct: 339 LQNHYPPISVLDSLSRLMSSIAAPEHLGKARALRILLASYKRSEDLIRIGAYQKGFDTVL 398

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           D+AV  +P +  FL+Q+  +      F  + K+L 
Sbjct: 399 DRAVEVLPELNRFLQQTSEETPR---FAAVAKRLN 430


>gi|167588564|ref|ZP_02380952.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ubonensis Bu]
          Length = 459

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/382 (41%), Positives = 224/382 (58%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D   
Sbjct: 77  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLYGRVLDGLGRPLDARG 136

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +  G   +      P  + RQ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 137 PV-TGAAWVSTQQDPPNPLARQMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 195

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 196 LGMIARGARADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 255

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F  +G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 256 VATAIAEHFRDEGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 315

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +  +G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 316 AG--QGARGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 373

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     +   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 374 LSRVMPLVANRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIAAF 433

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+    S EDV F  +  +L
Sbjct: 434 CAQA----SHEDVRFDALLARL 451


>gi|332526948|ref|ZP_08403037.1| flagellar protein export ATPase FliI [Rubrivivax benzoatilyticus
           JA2]
 gi|332111387|gb|EGJ11370.1| flagellar protein export ATPase FliI [Rubrivivax benzoatilyticus
           JA2]
          Length = 469

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/320 (44%), Positives = 197/320 (61%), Gaps = 4/320 (1%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV+++ G P+D    +   D   + M + P  AM+R  V +   TG+R I+    +  
Sbjct: 131 LGRVVDSHGHPMDRGGPIA--DAHAQPMIRRPINAMDRDPVRRALDTGVRSINALLTVGR 188

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAG+G+GKS LL M AR    D +++ L+GERGREV+EFIED LG D L++SVV
Sbjct: 189 GQRLGLFAGTGVGKSVLLGMMARYTAADVIVVGLIGERGREVKEFIEDILGEDGLRRSVV 248

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D  P++R      A  IAE+F  +G +VLL++DS+TR+A + REIA   GE P  
Sbjct: 249 VAAPADAPPLVRMQGASYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAIGEPPAT 308

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ R ILDGHIVL+
Sbjct: 309 KGYPPSVFAKLPQLVERSGNGLNGVGSITAFYTVLTEGDDPQDPIADAARGILDGHIVLS 368

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D   SVSR+       +       L  L+ ++ + RD+  +G Y PG 
Sbjct: 369 RELAESGHYPAIDVERSVSRVMSSVAPKEHLLAARKLRQLLAKYNKARDLIQLGAYAPGH 428

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D  LD AV     I   L+Q
Sbjct: 429 DAELDTAVRLHGQIVALLQQ 448


>gi|157373215|ref|YP_001471815.1| FliI/YscN family ATPase [Shewanella sediminis HAW-EB3]
 gi|157315589|gb|ABV34687.1| ATPase, FliI/YscN family [Shewanella sediminis HAW-EB3]
          Length = 447

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/364 (39%), Positives = 219/364 (60%), Gaps = 7/364 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  N + + + P+     +  G  V     + +I       GRV++ LG+P+D    L
Sbjct: 64  EVVGFNRETLCLMPIEHTSGLMPGSRVMPLAEQVKIPVGTSLLGRVLDGLGQPLDALGPL 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K   S+ + +     + R+ + +    GIR I+   P+  GQR+G+FAGSG+GKS LL 
Sbjct: 124 -KNLQSVPLSNNTTNPLLRKPIREPLDVGIRAINALLPIGRGQRLGLFAGSGVGKSVLLG 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREVREFIE+ LG+   +++VV+ A +D +P++R  A    
Sbjct: 183 MMTRFTEADVVVVGLIGERGREVREFIEESLGEEGRERAVVIAAPADTTPLMRMRAMRLC 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +A  F  +G  VLL++DS+TR+A + REIA + GE P  +GYP S F++LP L+E  G
Sbjct: 243 HHVAAAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPSLVELAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G +TA  +VL +GD+  DPIAD+ R+ILDGH+VL+R LAE+G +P +D  ASVS
Sbjct: 303 NGQDPVGTLTAFYTVLTEGDDQQDPIADAARAILDGHLVLSRKLAEQGHFPAIDISASVS 362

Query: 359 RLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           RLA +   AD+ +L       HL  R+ E R++  +GGY+ G D  +D AV   P++  F
Sbjct: 363 RLATQV--ADQTQLSQGHHFRHLNSRYNEVRELLPLGGYQAGHDPQMDLAVRSYPMMAQF 420

Query: 417 LKQS 420
           L+Q+
Sbjct: 421 LQQN 424


>gi|167828527|ref|ZP_02459998.1| type III secretion system ATPase [Burkholderia pseudomallei 9]
          Length = 619

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/402 (39%), Positives = 229/402 (56%), Gaps = 9/402 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           VV+ G +  +      V+ L   V LG+    + +    L   +V+    D+  + P   
Sbjct: 23  VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 80

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E+IS    V   GR   I       GRVI+ LG+P+DG   L    L   +++  P  M
Sbjct: 81  LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 139

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    D  +I+L+G
Sbjct: 140 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 199

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF  +G  VLL+
Sbjct: 200 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 259

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+ITA+ +VL 
Sbjct: 260 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 317

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+          +  + 
Sbjct: 318 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 377

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 378 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 419


>gi|330985212|gb|EGH83315.1| type III secretion component [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331008648|gb|EGH88704.1| type III secretion component [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 442

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG        +    +   PPA  +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E  L    + ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP  +  G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSE 426


>gi|188528185|ref|YP_001910872.1| flagellum-specific ATP synthase [Helicobacter pylori Shi470]
 gi|188144425|gb|ACD48842.1| flagellum-specific ATP synthase [Helicobacter pylori Shi470]
 gi|308062682|gb|ADO04570.1| flagellum-specific ATP synthase [Helicobacter pylori Cuz20]
          Length = 434

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLHARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|330818625|ref|YP_004362330.1| Flagellum-specific ATP synthase FliI [Burkholderia gladioli BSR3]
 gi|327371018|gb|AEA62374.1| Flagellum-specific ATP synthase FliI [Burkholderia gladioli BSR3]
          Length = 476

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/320 (44%), Positives = 198/320 (61%), Gaps = 6/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+D    L   +L   + +     + R+ +      G+R I+    +  GQ
Sbjct: 136 GRVVDASGRPLDRLGPLAS-ELDAPLSAPTINPLEREPIHHVLDVGVRAINALLTVGRGQ 194

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL   AR    + ++I L+GERGREV+EFIE  LG D L +SVVV 
Sbjct: 195 RMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVA 254

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +G
Sbjct: 255 APADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKG 314

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 315 YPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 374

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIRLIGGYRPGV 399
           LAE G YP +D   S+SR        DE+ L  V     ++ R++  RD+  +G Y  G 
Sbjct: 375 LAEAGHYPAIDIEQSISRAMTSLI--DERHLDRVRRFKQMLSRYQRNRDLIAVGAYAAGR 432

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D  LD+A+   P I  FL+Q
Sbjct: 433 DAQLDRAIALYPRIEAFLQQ 452


>gi|317181103|dbj|BAJ58889.1| flagellum-specific ATP synthase [Helicobacter pylori F32]
          Length = 434

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/337 (43%), Positives = 208/337 (61%), Gaps = 3/337 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID   +L    L+  I   + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITMPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434


>gi|297569158|ref|YP_003690502.1| flagellar protein export ATPase FliI [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925073|gb|ADH85883.1| flagellar protein export ATPase FliI [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 438

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/349 (40%), Positives = 216/349 (61%), Gaps = 6/349 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+  S    GR+I+ LG+P+DG+  L  G+    + ++    M R+R+      G+R
Sbjct: 90  GAARVPVSQDLLGRIIDGLGQPMDGNGPL-PGESFYPLYAEPLNPMTRERITDPVDVGVR 148

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    L  GQRIG+ AGSG+GKSTL+ M AR    D  +I+L+GERGRE+++FIE  L
Sbjct: 149 AINGLLTLGKGQRIGIMAGSGVGKSTLMGMIARHTAADISVIALIGERGRELKDFIERDL 208

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G + L +SVVVVATSD+ P++R      A+ +AEYF   G +V+L++DS+TR+A S RE+
Sbjct: 209 GPEGLARSVVVVATSDQPPLVRMRGAYLAMAVAEYFRDLGRDVVLMMDSVTRYAMSGREV 268

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
               GE P +RGY  SVF +LP+LLER G  +  KG+IT + +VLV+GD+ N+PIAD+VR
Sbjct: 269 GLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSITGIFTVLVEGDDMNEPIADAVR 327

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SI+DGHIVL+R LA +G YP ++ + SVSR        ++ +       ++  +  + D+
Sbjct: 328 SIVDGHIVLSRDLASQGHYPAIEVMGSVSRCMSDVVPEEQVRAAHRFLEVLALYRRSEDL 387

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             IG Y  G +  +D A+  +  +  +L+Q+ +D  +   F +   +LQ
Sbjct: 388 INIGAYAKGSNPKIDGAIAMIDKLNGYLRQAVNDRVT---FSDSAAQLQ 433


>gi|119503667|ref|ZP_01625750.1| ATPase FliI/YscN [marine gamma proteobacterium HTCC2080]
 gi|119460729|gb|EAW41821.1| ATPase FliI/YscN [marine gamma proteobacterium HTCC2080]
          Length = 477

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/359 (43%), Positives = 217/359 (60%), Gaps = 20/359 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  RI       GRVI+  G+P+DG  S    D+++ +  +    M+R  ++K    GIR
Sbjct: 100 GSDRIPVGPGLLGRVIDGAGRPLDGF-SPPTSDITVPMQGEPLNPMDRGALQKPLDVGIR 158

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQRIG+FAGSG+GKSTLL M  R    D V++ LVGERGREVREF+ED L
Sbjct: 159 AINSLLTVARGQRIGLFAGSGVGKSTLLGMMTRFTEADVVVVGLVGERGREVREFVEDSL 218

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G + LKK+VVV   +D SP++R      A  IAEY+ ++G NVLL++DS+TRFA + REI
Sbjct: 219 GPEGLKKAVVVATPADTSPLMRVAGCWRATAIAEYYRAQGLNVLLLVDSLTRFAQAQREI 278

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE PV+RGY  SVFS +P L+ER G      G+ITAV +VL +GD+  DPIADS R
Sbjct: 279 GLAAGEPPVSRGYTPSVFSLMPNLIERAG--NLGSGSITAVYTVLTEGDDLQDPIADSAR 336

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEE 385
           +ILDGH+VL+R +A+ G +P +D  AS+SR    + D A  A  +K    +  +   ++ 
Sbjct: 337 AILDGHVVLSRKMADSGLFPAIDIEASISRAMLQITDDAQQAHARK----VRDVYATYQA 392

Query: 386 TRDIRLIGGYRPGVDLILD------KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RD+  +G YR G D  +D       AVHQ  +I   L Q  S  SS     ++++ +Q
Sbjct: 393 NRDLIAMGAYRAGTDPQIDLAIRHHNAVHQ--LIEQPLDQPASFDSSLSELAQVSEAMQ 449


>gi|242278623|ref|YP_002990752.1| ATPase, FliI/YscN family [Desulfovibrio salexigens DSM 2638]
 gi|242121517|gb|ACS79213.1| ATPase, FliI/YscN family [Desulfovibrio salexigens DSM 2638]
          Length = 437

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/327 (45%), Positives = 202/327 (61%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR ++A G+PIDG   +   D    +    P  + R R+ +    G++ I+    L  GQ
Sbjct: 101 GRAVDAFGEPIDGKGPIIP-DAYNPLHRDPPNPLERPRINEPLDVGVKAINGLLTLGKGQ 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+ AGSG+GKSTLLSM AR    D  +I+L+GERGREV EFIE  LG + L +SV+V+
Sbjct: 160 RMGIMAGSGVGKSTLLSMMARYTVADINVIALIGERGREVVEFIERDLGPEGLARSVLVI 219

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+SP++R  A  TA  IAEYF     +VLL++DS+TRFA + RE+   +GE P   G
Sbjct: 220 ATSDKSPLIRLRAAYTATAIAEYFRDLNKDVLLMMDSVTRFAMAGREVGLAAGEPPTRGG 279

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF++LP+LLER G  +   G+IT V +VLVDGD+  +PIAD+VRSILDGHIVL R 
Sbjct: 280 YTPSVFAQLPKLLERAG--KNPNGSITGVYTVLVDGDDFTEPIADAVRSILDGHIVLTRD 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA++G YP +D L SVSR+       D       +   +  F +  D+  IG Y+ G + 
Sbjct: 338 LADQGHYPCIDVLKSVSRVRGDIVQNDIVAAGRKVLGQLATFRKVEDMVNIGAYQKGANP 397

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +D A+  VP I  FL+Q   D  + D
Sbjct: 398 EIDTAIKMVPAINGFLQQLVEDKQTID 424


>gi|55977138|gb|AAV68359.1| FliI [Herminiimonas arsenicoxydans]
 gi|193222344|emb|CAL62030.2| flagellum-specific ATP synthase [Herminiimonas arsenicoxydans]
          Length = 471

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 196/320 (61%), Gaps = 6/320 (1%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++  G+P+D   SLG      S  +  +    + R  +      G+R I+    +  
Sbjct: 135 GRVLDGAGRPLD---SLGPLHATHSGPLNVRAANPLTRAPITDVLDVGVRAINSMLTVGR 191

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVV
Sbjct: 192 GQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARSVV 251

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D  P++R         IAE+F  +G +VLLI+DS+TR+A + REIA   GE P  
Sbjct: 252 VAAPADTPPLMRLQGAAYTTAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPPAT 311

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G  ++  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVLN
Sbjct: 312 KGYPPSVFAKLPALVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLN 371

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           RSLAE G YP +D   S+SR      + + +K    L  L  R++  RD+  +G Y  G 
Sbjct: 372 RSLAEAGHYPAIDIEQSISRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSAGS 431

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D +LD+A+     I  FL+Q
Sbjct: 432 DPVLDEAIALNTKIESFLQQ 451


>gi|84785902|gb|ABC62090.1| secretion and cellular translocation protein N [Chlamydophila
           psittaci]
          Length = 442

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/386 (39%), Positives = 231/386 (59%), Gaps = 16/386 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID +   
Sbjct: 61  EVVGFTQNFAFLSPLGELTGVSPASEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118

Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            KG L     +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GK
Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177

Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           S+LL M AR ++  D  +I+L+GERGREVREFIE  LG+  +K+SV+VV+TSD+S  LR 
Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPR
Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 297

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G S  +KG ITA  +VLV GD+  +P+AD V+SILDGH+V + +LA+   YP +D
Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMKEPVADEVKSILDGHVVSSNALAQAYHYPAID 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SRL       ++++++     +  +++    +  IG YR G D  +D A+  +  
Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVWGKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FLKQ   D+  +  ++E +++L+
Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438


>gi|52630923|gb|AAU84925.1| putative flagellum-specific ATP synthase [Toxoptera citricida]
          Length = 451

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/336 (44%), Positives = 213/336 (63%), Gaps = 3/336 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N  G P+D   +L     ++ I  K    ++R+ ++K   TGI  I+    +  GQ
Sbjct: 116 GRVLNGKGDPLDNLPNLDPQCFTI-IKKKYINPLHRRPIKKILDTGICAINGLLTIGRGQ 174

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+F+ +GIGKS LL M ++    D V+I L+GERGREVR+FI++ LG D L KSVV+ 
Sbjct: 175 RIGIFSSTGIGKSILLGMMSKYTEADVVVIGLIGERGREVRDFIDNILGSDGLLKSVVIA 234

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+L+  A L A +IAEYF  K  NVLLI+DS+TR+A + RE++ + GELPV+RG
Sbjct: 235 APADVSPLLQIEAALYATSIAEYFRDKNKNVLLIMDSLTRYAMAQREVSLSLGELPVSRG 294

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP+SVFS +P L+ER G  + E G+ITA  +VL + +   DPI+   RSILDGHI+L+R 
Sbjct: 295 YPSSVFSNIPLLVERSGNIDNE-GSITAFYTVLTEYEEEQDPISQICRSILDGHIILSRY 353

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            AE G YP +D  +S+SR+  +  S  +         LI  ++  +D+  IG Y  G D+
Sbjct: 354 YAELGHYPAIDIESSISRVMPEIISQQQYLKACYFKKLIASYQRNKDLINIGAYIKGNDV 413

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           ILD+A+ + P +  FL+Q PS+ S+  +  E   KL
Sbjct: 414 ILDEAIQKWPNLEKFLQQKPSEKSNYLISCEKLNKL 449


>gi|15723922|gb|AAL06369.1|AF311901_21 EscN [Citrobacter rodentium]
          Length = 446

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/379 (40%), Positives = 217/379 (57%), Gaps = 8/379 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +VI IN D V++ P      +  G  + + G  F+I       GR+++ +G+P+  + 
Sbjct: 67  LAEVIAINGDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 126

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +         + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GKSTL
Sbjct: 127 ATLYLPFKRSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 186

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           L M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A  T
Sbjct: 187 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 246

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G NVL ++DS+TR+A + R++   SGE  V  G+P SVFS LP+LLER 
Sbjct: 247 ATTIAEYFRDQGKNVLFMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 306

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D   S 
Sbjct: 307 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+     I   L
Sbjct: 365 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSSL 424

Query: 418 KQSPSDLSS-----EDVFQ 431
           +QS  D+SS     E++F+
Sbjct: 425 QQSTKDISSYEKTIENLFK 443


>gi|317178126|dbj|BAJ55915.1| flagellum-specific ATP synthase [Helicobacter pylori F16]
          Length = 434

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 156/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   ++ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID    L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434


>gi|28211328|ref|NP_782272.1| flagellum-specific ATP synthase [Clostridium tetani E88]
 gi|28203768|gb|AAO36209.1| flagellum-specific ATP synthase [Clostridium tetani E88]
          Length = 446

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/372 (41%), Positives = 226/372 (60%), Gaps = 6/372 (1%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           ++  +N+  + +V+    D V + P+G    I+ G  V   G    +  S    G+V++ 
Sbjct: 54  IYNQQNNPIVCEVVGFVEDNVILMPLGELIGIAPGCRVIPSGNPLSVKCSEELFGKVLDG 113

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG P++G+    K  +   +  + P  + R+R++    TG+R ID +     GQRIG+FA
Sbjct: 114 LGSPLNGEKI--KTGVPYPLDREPPDPLKRRRIKDVIPTGVRAIDGYLTCGEGQRIGIFA 171

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKST L M A+    D  +I L+GERGREV +F+E  LG+  +KKS+V+ ATSD+ 
Sbjct: 172 GSGVGKSTSLGMIAKYAEADVNVICLIGERGREVLDFVEKDLGEEGMKKSIVICATSDKP 231

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            ++R     TA  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +GY  SVF
Sbjct: 232 ALVRIKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVF 291

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G S+K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  
Sbjct: 292 AMLPRLMERSGMSDK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRDLAAKNH 349

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D L+S+SRL ++    + K+  S    LI  ++E  D+  IG Y  G +  +D A+
Sbjct: 350 YPAIDILSSISRLMNEISVKEHKESASIGRDLIATYKEAEDLINIGAYVKGSNEKIDIAI 409

Query: 408 HQVPIIYDFLKQ 419
             +  I +FL Q
Sbjct: 410 KYIDSINEFLTQ 421


>gi|289646623|ref|ZP_06477966.1| type III secretion component, putative [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 442

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG        +    +   PPA  +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E  L    + ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP  +  G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPPRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSSIEAFLRQPPSE 426


>gi|238794013|ref|ZP_04637631.1| Flagellum-specific ATP synthase [Yersinia intermedia ATCC 29909]
 gi|238726645|gb|EEQ18181.1| Flagellum-specific ATP synthase [Yersinia intermedia ATCC 29909]
          Length = 454

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 145/335 (43%), Positives = 201/335 (60%), Gaps = 7/335 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++   KP+DG   L   + S       PP   + R  +E+    G+R I+    +  
Sbjct: 117 GRVLDGSAKPLDG---LPAPETSYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGR 173

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV
Sbjct: 174 GQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVV 233

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           + A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  
Sbjct: 234 IAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPAT 293

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+
Sbjct: 294 KGYPPSVFAKLPALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLS 353

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D  AS+SR        +    V     L+  ++  RD+  +G Y  G 
Sbjct: 354 RRLAESGHYPAIDIEASISRAMTSLIDENHYSQVRQFKQLLASYQRNRDLVSVGAYAAGS 413

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           D +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 414 DPLLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 448


>gi|238752371|ref|ZP_04613849.1| secretion system apparatus ATP synthase ssaN [Yersinia rohdei ATCC
           43380]
 gi|238709412|gb|EEQ01652.1| secretion system apparatus ATP synthase ssaN [Yersinia rohdei ATCC
           43380]
          Length = 433

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/399 (40%), Positives = 225/399 (56%), Gaps = 13/399 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSA 99
           V LG+   H G + D L +V+ I      + P      +  G+ V    H  R R+ P  
Sbjct: 36  VALGELC-HIG-SVDMLAEVVAIEQQTALLSPFASSTGLRSGEWVRPLGHAHRIRVGPD- 92

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ LG PID   +L       E+ +  P  + RQ V+    TGIR ID      
Sbjct: 93  -LMGRVLDGLGVPIDSGPALT--GYWRELDNSPPDPLTRQPVQHLLTTGIRAIDGVLSCG 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218
            GQRIG+FA +G+GKS+LL M       D  +++L+GERGREVREF+E  L    + ++V
Sbjct: 150 EGQRIGIFAAAGVGKSSLLGMLCAGCSADITVLALIGERGREVREFLEQVLTPEARARTV 209

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +VVATSD   + R     TA T+AEYF   G  VLL+ DS+TR+A + REI   +GE+P 
Sbjct: 210 IVVATSDRPALERLKGIYTATTVAEYFRECGLKVLLMADSLTRYARAAREIGLAAGEIPA 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
              +P SVF+ LPRLLER G S +  G+ITA  +VLV+GD+ N+P+AD VRS+LDGH+VL
Sbjct: 270 MGSFPASVFAALPRLLERAGNSAQ--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHLVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA  G YP +D  AS+SR+  +  S     L   L  +   ++E   +  +G Y+ G
Sbjct: 328 SRQLAGAGHYPAIDIAASISRIMPQIASVAHLALAQKLRRMQSCYQEIELLVRVGEYQEG 387

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            DL  D+A+ + P I  FL+Q  S LSS     ++   L
Sbjct: 388 QDLQADEALARYPAIRAFLQQEHS-LSSGQTAADLNHTL 425


>gi|114562363|ref|YP_749876.1| flagellum-specific ATP synthase [Shewanella frigidimarina NCIMB
           400]
 gi|114333656|gb|ABI71038.1| flagellar protein export ATPase FliI [Shewanella frigidimarina
           NCIMB 400]
          Length = 446

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 200/318 (62%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G P+DG   L     +      + P ++R+ + +    G+R I+    +  GQ
Sbjct: 106 GRVLDGSGVPLDGLGPLNTDQHASRHGPYINP-LSRRAITEPLDVGVRAINSMLTVGKGQ 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M  R    D +++ LVGERGREV+EFIED LG +   +SVVV 
Sbjct: 165 RMGLFAGSGVGKSVLLGMMTRGSKADIIVVGLVGERGREVKEFIEDILGKEGRARSVVVA 224

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R  A  T+  IAEYF   G +VLL++DS+TR+A + RE+A   GE P  +G
Sbjct: 225 APADTSPLMRLRACETSTRIAEYFRDLGYDVLLLMDSLTRYAQAQREVALAVGEPPATKG 284

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LPRL+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 285 YPPSVFAKLPRLVERAGNGGAGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRQ 344

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D  AS+SR+A    S +  + +  +  +   +++ RD+  IG Y  G D 
Sbjct: 345 LADSGHYPAIDVEASISRVAPMVISEEHLEAMRKVKQMYSLYQQNRDLISIGAYSQGSDP 404

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A+   P +  FL+Q
Sbjct: 405 RIDNAIRLQPAMNAFLRQ 422


>gi|261838695|gb|ACX98461.1| flagellar export protein ATP synthase [Helicobacter pylori 51]
          Length = 434

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/397 (39%), Positives = 227/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           +GD V + +   ++ +G V+    +     P    E    GD V         P      
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID    L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQIGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLAQDENALHPFEQSFQQLEEILK 434


>gi|238762368|ref|ZP_04623339.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
 gi|238699353|gb|EEP92099.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
          Length = 439

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 210/363 (57%), Gaps = 8/363 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + ++ Y+ P    + +  G  VF     G   I  S  W GRV+N LG+PIDG  
Sbjct: 50  QVVGFDREVTYLMPFKQPDGLMSGARVFPCELDGELLIGDS--WLGRVVNGLGEPIDGKG 107

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG        + ++ P + RQ V      G++ I+    +  GQR+G+ AGSG+GKS L
Sbjct: 108 LLGGETPLQPQLPQIHP-LQRQPVSTPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSML 166

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE+ L    + KSVV+ A +DESP++R  A  
Sbjct: 167 LGMMTRYTQADVVVVGLIGERGREVKEFIENSLQACGMAKSVVITAPADESPLMRIRATE 226

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              ++A Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 227 LCHSVATYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 286

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G +TA+ +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S
Sbjct: 287 AGNSYG-SGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRQLAESGHYPAIDIGQS 345

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR   +    ++ +    L      + E + +  +GGY  G D + D+AV   P I DF
Sbjct: 346 ISRCMSQISPREQVQSARLLKQCYADYMEIKPLIPLGGYVAGADPMADRAVQYYPAIIDF 405

Query: 417 LKQ 419
           L+Q
Sbjct: 406 LRQ 408


>gi|85059279|ref|YP_454981.1| type III secretion system ATPase [Sodalis glossinidius str.
           'morsitans']
 gi|84779799|dbj|BAE74576.1| putative type III secretion ATP synthase [Sodalis glossinidius str.
           'morsitans']
          Length = 442

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 158/383 (41%), Positives = 226/383 (59%), Gaps = 11/383 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            L +V+RI  D V + P G  E ++ G  V      + +P  +   GRVI+ LG+ +D  
Sbjct: 60  GLAEVVRIEGDDVLLSPYGPTEGLTYGQRVQPLRHRQRAPVGSALLGRVIDGLGRALD-- 117

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           D         E+ +  PP + RQR+ +   TGIR ID       GQRIG+FA +G GKST
Sbjct: 118 DMPDPQGPWRELDAPPPPPLTRQRIARPLLTGIRAIDALLTCGEGQRIGIFAAAGGGKST 177

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           LLSM +     D  +++L+GERGREVREF+E  L D  + + V +VATSD   + R  A 
Sbjct: 178 LLSMLSACPDCDVTVLALIGERGREVREFLEQTLDDEARQRCVTIVATSDRPALERVCAL 237

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A T+AE F  +G  VLL+ DS+TR+A + REIA  +GE  V   YP +VF+ LPRLLE
Sbjct: 238 SLATTVAEAFRDQGLRVLLLADSLTRYARAGREIALAAGETCVGSSYPPAVFAALPRLLE 297

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G      G+ITA  +VLV+GD+ N+P+AD VRS+LDGHI+L+R LAE G +P +D LA
Sbjct: 298 RAG--MGTVGSITAFYTVLVEGDDINEPLADEVRSLLDGHIILSRRLAESGHFPAIDVLA 355

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+           LV++L  L+  + +   +  +G Y+ G D + D+AV   P I  
Sbjct: 356 SLSRIMPSIVGERHIVLVATLRQLLSVYRDVELLVRVGEYQRGDDPLADRAVDAYPAICA 415

Query: 416 FLKQ---SPSDLSSEDVFQEITK 435
           FL+Q   +P D+  +D+ Q++ +
Sbjct: 416 FLQQRENTPCDI--DDLQQQLMR 436


>gi|300722643|ref|YP_003711933.1| flagellum-specific ATP synthase [Xenorhabdus nematophila ATCC
           19061]
 gi|297629150|emb|CBJ89746.1| flagellum-specific ATP synthase [Xenorhabdus nematophila ATCC
           19061]
          Length = 458

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 199/331 (60%), Gaps = 6/331 (1%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV++  G+P+DG   L   D S        P   + R  +      G+R I+    + 
Sbjct: 120 LGRVLDGAGRPLDG---LPAPDTSYRAPLTTTPFNPLQRTPISDVLDVGVRAINSLLTVG 176

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SV
Sbjct: 177 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGVEGLSRSV 236

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P 
Sbjct: 237 VVAAPADVSPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPA 296

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G    + G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL
Sbjct: 297 TKGYPPSVFAKLPALVERAGNGVSDGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVL 356

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE G YP +D  AS+SR           + +     L+  ++  RD+  +G Y  G
Sbjct: 357 SRSLAESGHYPAIDIAASISRAMTALIDNTHYRRIQFFKQLLSSYQRNRDLINVGAYAAG 416

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            D +LDKA+   P +  FL+Q   + S  D+
Sbjct: 417 SDPLLDKAIELYPYMAQFLQQGIDERSEYDM 447


>gi|15612380|ref|NP_224033.1| flagellum-specific ATP synthase [Helicobacter pylori J99]
 gi|9973201|sp|Q9ZJJ3|FLII_HELPJ RecName: Full=Flagellum-specific ATP synthase
 gi|4155920|gb|AAD06888.1| FLAGELLUM-SPECIFIC ATP SYNTHASE [Helicobacter pylori J99]
          Length = 434

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   ++ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID    L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLVQDENALQPFEQSFQQLEEILR 434


>gi|119034703|gb|ABL59998.1| SctN [Lysobacter enzymogenes]
          Length = 450

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 217/367 (59%), Gaps = 5/367 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ ++     + P+G  + ++    V   GR   +       GR+++A G  IDG    
Sbjct: 73  EVVGVSRQYTLLTPLGALDGVAHDTEVIATGRQASVRCGEGLLGRILDANGDAIDGRGGF 132

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G   + M I +  P  + RQ +++ F TG+R +D       GQR+G+FA +G GKSTLL 
Sbjct: 133 GP-TVQMPIYAASPNPLARQLIDRPFATGVRALDTVITAGVGQRLGIFAVAGGGKSTLLG 191

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +I+LVGERGREV EFI D LG+  LKKS++VVATSD   + R  A   A
Sbjct: 192 MLARGGDADVNVIALVGERGREVNEFIHDNLGEEGLKKSIIVVATSDRPALERSRAAWVA 251

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  V+L++DS+TRFA ++R++    GE P  RG+P SVFS++PRL ER G
Sbjct: 252 TAIAEYFRDRGKRVMLLVDSVTRFARALRDVGLAIGEPPARRGFPPSVFSQMPRLFERAG 311

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               +KG+ITA  +VL++G++ +DP+A+ VRSILDGHIVL+R LA    YP +D L S+S
Sbjct: 312 --NNDKGSITAFYTVLMEGEDGDDPVAEEVRSILDGHIVLSRKLAAAYHYPAIDVLVSLS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R   +      ++    L   + + ++   +  +G Y+ G D   D A+ ++  I   LK
Sbjct: 370 RTMPRVADEAHQRAAGQLRKYLAKHQDIELLLQLGEYKRGSDADADIAIEKIEPIRKLLK 429

Query: 419 QSPSDLS 425
           QS +DL+
Sbjct: 430 QSSNDLA 436


>gi|226327723|ref|ZP_03803241.1| hypothetical protein PROPEN_01596 [Proteus penneri ATCC 35198]
 gi|225203427|gb|EEG85781.1| hypothetical protein PROPEN_01596 [Proteus penneri ATCC 35198]
          Length = 455

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 144/339 (42%), Positives = 202/339 (59%), Gaps = 5/339 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G P+DG      G  +  I   + P + R  +      G+R I+    + 
Sbjct: 114 ALLGRVLDGSGYPLDGLPPPDTGYRAPLITPPINP-LQRTPITDVLDVGVRAINSLLTVG 172

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SV
Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARFTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P 
Sbjct: 233 VVAAPADVSPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAVGEPPA 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 293 TKGYPPSVFAKLPALVERAGNGVDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE G YP +D  AS+SR           + V     L+  ++  RD+  +G Y  G
Sbjct: 353 SRSLAESGHYPAIDIEASISRAMTSLIDKTHYRRVQMFKQLLSNYQRNRDLINVGAYAAG 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            D +LDKA+   P +  FL+Q   D+  +  +Q   ++L
Sbjct: 413 SDPMLDKAIALYPSLAKFLQQ---DIQEQCSYQSACEQL 448


>gi|310764885|gb|ADP09835.1| Flagellum-specific ATP synthase [Erwinia sp. Ejp617]
          Length = 454

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 201/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+DG  +  K   +      + P ++R  ++     G+R I+    +  GQ
Sbjct: 115 GRVLDAQGRPLDGRPAPLKTRCASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + ++++VV+ 
Sbjct: 174 RMGLFAGSGVGKSVLLGMMARFTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR    + A  +AE F  +G NVLLI+DS+TRFA + RE+A   GE P  +G
Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR   +     + + V S    +  ++   D+  +G Y  G D 
Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413

Query: 402 ILDKAVHQVPIIYDFLKQS 420
           +LD+A+ + P +  FL+QS
Sbjct: 414 LLDRAIARYPQMESFLQQS 432


>gi|388096|gb|AAA20119.1| yscN [Yersinia pseudotuberculosis]
 gi|392946|gb|AAA73398.1| YscN [Yersinia pseudotuberculosis]
          Length = 439

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 144/324 (44%), Positives = 200/324 (61%), Gaps = 4/324 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID       GQ
Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FA +G GKSTLL+   RS   D  +++L+GERG EVREFIE  LG+  L+K+ +VV
Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGPEVREFIESDLGEEGLRKAFLVV 223

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG
Sbjct: 224 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LPRL+ER G S K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R 
Sbjct: 284 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG Y+ G D 
Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGHLRRLLAKYEEVELLLQIGEYQKGQDK 401

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425
             D+A+ ++  I  +L Q   +LS
Sbjct: 402 EADQAIERMGAIRGWLCQGTHELS 425


>gi|34498589|ref|NP_902804.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
 gi|34104443|gb|AAQ60801.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
          Length = 466

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 201/323 (62%), Gaps = 4/323 (1%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV+++LG+P+DG   +   D    + S+    ++R  V      G+R I+    +
Sbjct: 126 ASLLGRVLDSLGRPLDGLGPI-HPDAWFPLYSQPMNPLHRTPVHDVLDVGVRAINGLLTV 184

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV++FIE+ LG+  + +S
Sbjct: 185 GRGQRLGLFAGSGVGKSVLLGMMARFTKADVVVVGLIGERGREVKDFIENILGEEGRARS 244

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A +D  P++R      A  +AEYF S+G +VLL++DS+TRFA + REIA   GE P
Sbjct: 245 VVVAAPADMPPLMRLHGAAYATALAEYFRSQGLDVLLLMDSVTRFAMAQREIALAIGEPP 304

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
           V RGYP SVF+ LP+L+ER G  E+  G+IT   +VL +GD+  DPIADS R+ILDGH V
Sbjct: 305 VTRGYPPSVFARLPQLIERAGNGEEGGGSITGFYTVLSEGDDQQDPIADSARAILDGHFV 364

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R LAE G YP +D   S+SR+        +  L      L  R++  RD+  +G Y  
Sbjct: 365 LSRDLAEAGHYPAIDIEQSISRVMVDVVPQQQMDLARHFKQLYSRYQRNRDLISVGAYVS 424

Query: 398 GVDLILDKAV-HQVPIIYDFLKQ 419
           G D +LD A+  Q+P++  FL Q
Sbjct: 425 GSDPVLDDAMRRQLPMV-SFLTQ 446


>gi|283834468|ref|ZP_06354209.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
 gi|291070015|gb|EFE08124.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
          Length = 446

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 148/380 (38%), Positives = 218/380 (57%), Gaps = 4/380 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
            Q +  N DI Y+ P      +  G  VF   + + I  S  W GRV+N LG+ +D    
Sbjct: 59  AQAVGFNRDITYLMPFKHPVGLMAGARVFPEEKAQEILISESWLGRVVNGLGESLDAKGR 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D+       + P + R+ V +    G++ I+    +  GQR+G+ AGSG+GKS LL
Sbjct: 119 LTGNDVLPPQAPSINP-LTRRSVNQPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLL 177

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M  R    D V++ L+GERGREV+EFI+  LG + L KS++V A +DESP++R  A   
Sbjct: 178 GMITRQTKADIVVVGLIGERGREVKEFIDHSLGAEGLAKSIIVAAPADESPLMRLKATEL 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
             +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  
Sbjct: 238 CHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESA 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G SE E G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+
Sbjct: 298 GNSESE-GSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSI 356

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +    + ++    L      + E + +  +GGY  G D  +DKAV   P I  FL
Sbjct: 357 SRCMTQVTPYEHQQSARLLKQNYAAYMEIKPLIPLGGYVAGADPSVDKAVKVFPAIERFL 416

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q  S+ +S ++ Q   + L
Sbjct: 417 RQEVSEPASLELVQSRLQAL 436


>gi|33596155|ref|NP_883798.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis
           12822]
 gi|33573158|emb|CAE36809.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis]
          Length = 491

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 204/329 (62%), Gaps = 6/329 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   + +      + P ++R  ++     G+R I+    + 
Sbjct: 142 AMLGRVVDGAGRPLDGLGPLAGAEQAPLTALPINP-LSRAPIDSVLDVGVRAINGLLTVG 200

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 201 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 260

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A  +AE+F  +G +VLLI+DS+TRFA + REIA   GE P 
Sbjct: 261 VVAAPADVSPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPA 320

Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP SVF++LP L+ER G   PS   K G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 321 TKGYPPSVFAKLPALVERTGMGAPSPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 380

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H+VL+R LAE G YP +D  AS+SR      + ++ + V     ++ R++  RD+  +G 
Sbjct: 381 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGA 440

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           Y  G D  LD A+ + P +  +L+Q+  D
Sbjct: 441 YVAGADPQLDDAIARYPRLEAYLQQNIGD 469


>gi|68164517|gb|AAY87246.1| predicted flagellar biosynthesis/type III secretory pathway ATPase
           [uncultured bacterium BAC17H8]
          Length = 441

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 136/325 (41%), Positives = 201/325 (61%), Gaps = 2/325 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ +ALGKPIDG   + + D    +M +    + R+ V+     G+R I+    +  GQ
Sbjct: 104 GRITDALGKPIDGGPDM-RLDGQWPLMGREINPLARKPVDSPLDVGVRAINALLTVGKGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           RIG+ AGSG+GKS LL M +R    D V++ ++GERGREV EF +  L G+   ++ +V 
Sbjct: 163 RIGIIAGSGVGKSVLLGMMSRFTTADIVVVGMIGERGREVGEFAKTVLEGEAAARTTIVA 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +D SP+LR      A  IAE++  +G +VLLI+DS+TR AH+ REI    GE P A+G
Sbjct: 223 VPADRSPLLRIRGAERATAIAEFYRDQGKDVLLIMDSLTRVAHARREIGLALGEQPTAKG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SV S +PRL+ER G     +G IT++ +VL DGD+ NDP+ D+ R+ILDGHI+L+R 
Sbjct: 283 YPPSVVSMIPRLIERTGSGAAGQGTITSIYTVLADGDDANDPVVDTARAILDGHILLSRQ 342

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            A+ G YP +D  +SVSR+ +    A + +       L+  + E RD+ L+GGY PG D+
Sbjct: 343 QAQMGVYPAIDVPSSVSRVMNDIVDAGQSEAARKFRRLVSLYLENRDLILMGGYTPGQDV 402

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
            LD AV   P + + ++Q+ SD ++
Sbjct: 403 DLDLAVSLWPQLMELIQQNGSDKAA 427


>gi|289208340|ref|YP_003460406.1| flagellar protein export ATPase FliI [Thioalkalivibrio sp. K90mix]
 gi|288943971|gb|ADC71670.1| flagellar protein export ATPase FliI [Thioalkalivibrio sp. K90mix]
          Length = 458

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 152/399 (38%), Positives = 225/399 (56%), Gaps = 6/399 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G +S +T + +    L   + +G   +  G+N   +  +V+    D  ++ P  +   ++
Sbjct: 41  GRLSRLTGLTFEAEGL--RLPMGGRALIHGENGAAVPAEVVGFQNDRTFLMPEELASGLT 98

Query: 83  LGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  +      R  P      GRVI+A G+P+DG   L   D S      + P + R  V
Sbjct: 99  PGARIEPLDIQREIPVGDALLGRVIDANGQPLDGKGPLRARDHSPLSGRPINP-LQRAPV 157

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R+   D +++ L+GERGRE
Sbjct: 158 REPLDVGIRSINGLLSVGRGQRLGLFAGSGVGKSVLLGMMTRNTSADVIVVGLIGERGRE 217

Query: 202 VREFIEDYLGDNLKKSVVVVAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V EFI + L +  ++  VVVA  +D+SP+LR+     A T+AE F  +G NVLL++DS+T
Sbjct: 218 VNEFIHEILDEESRQRTVVVAVPADQSPLLRQHGAWVATTVAESFRDRGLNVLLLMDSLT 277

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA   REIA   GE P ++GY  SVF+ LP+L+ER G  +   G+ITA  +VL +GD+ 
Sbjct: 278 RFAQGAREIAMAIGEPPASKGYAASVFARLPQLVERAGNGDVGGGSITAFYTVLAEGDDQ 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDPI D+ R+ILDGH+VL+R +AE GRYP +D  ASVSR+     + + ++       L 
Sbjct: 338 NDPIVDAARAILDGHVVLSREIAETGRYPAIDVSASVSRVMSALITPEHEQAARRFRDLA 397

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             +   RD+  +G YR G D  LD+AV     +  +L Q
Sbjct: 398 STYMRNRDLIAVGAYRRGADTHLDEAVAMHERLEAYLGQ 436


>gi|261840095|gb|ACX99860.1| flagellum-specific ATP synthase [Helicobacter pylori 52]
          Length = 434

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102
           +GD V + +   ++ +G V+    +     P    E    GD ++F              
Sbjct: 40  VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+ ID    L    L+  I + + P + R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+VVA
Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D  
Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           LD+A+ +  ++  FL Q  + L   E  FQ++ + L+
Sbjct: 398 LDEAIKKKALMEQFLVQDENALQPFEQSFQQLEEILR 434


>gi|221209597|ref|ZP_03582578.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD1]
 gi|221170285|gb|EEE02751.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD1]
          Length = 462

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 6/380 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 80  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 138

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 139 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 198

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 199 LGMIARGAQADVSVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 258

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 259 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 318

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 319 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 376

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 377 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 436

Query: 417 LKQSP-SDLSSEDVFQEITK 435
             Q+   D+  + +  ++TK
Sbjct: 437 CAQAQHEDVRFDALLAKLTK 456


>gi|38639342|gb|AAR25808.1| BcscN [Burkholderia multivorans E243]
          Length = 459

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 77  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 135

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+GVFA SG+GKSTL
Sbjct: 136 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGVFAPSGVGKSTL 195

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 196 LGMIARGAQADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 255

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 256 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 315

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 316 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 373

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 374 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 433

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+      EDV F  +  KL
Sbjct: 434 CAQA----QHEDVRFDALLAKL 451


>gi|54308119|ref|YP_129139.1| flagellum-specific ATP synthase [Photobacterium profundum SS9]
 gi|46912545|emb|CAG19337.1| putative polar flagellum-specific ATP synthase FliI [Photobacterium
           profundum SS9]
          Length = 440

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 157/401 (39%), Positives = 237/401 (59%), Gaps = 25/401 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDL----- 86
           V  T+  +     +G   + +  N D   +V+  + +I+++ P     E  LG +     
Sbjct: 31  VGLTLEAIGCRAPVGSLCIVETLNGDLEAEVVGFSGEILFLMP----SEQLLGVMPGAKV 86

Query: 87  --VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMN---RQR 140
             V H     + P     GRVI+ +G P+DG      GD+  E   S   PA+N   R+ 
Sbjct: 87  TPVLHDNGLPVGPE--LLGRVIDGVGNPLDG-----LGDIFTEKRASFTSPAINPLLRKP 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +++    GI+ I+    +  GQRIG+FAGSG+GKS  L M  R      V++ L+GERGR
Sbjct: 140 IKEPLDVGIKAINGLLSVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGR 199

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFI++ LG+   K++VV+ A +D SP++R     TA+TIAEYF  +G +VLL++DS+
Sbjct: 200 EVKEFIDEILGEEGRKRAVVIAAPADTSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSL 259

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REIA + GE P  +GYP SVF++LP L+ER G    ++G+ITA  +VL +GD+
Sbjct: 260 TRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGSGDQGSITAFFTVLTEGDD 319

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+   A   DE  L+S ++  
Sbjct: 320 LQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVM-PAIVDDEHMLMSKAVRQ 378

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           ++    + +D+  IG Y+PG D  +D+A    P +  +L+Q
Sbjct: 379 ILSICRKNQDLVSIGAYKPGTDPTIDQAFSFKPKLDAYLQQ 419


>gi|37525868|ref|NP_929212.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785297|emb|CAE14238.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 454

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 164/440 (37%), Positives = 238/440 (54%), Gaps = 20/440 (4%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL---- 59
           L TL    +  +K   V+  G ++  T +    T L  ++ LG   + + +N  N+    
Sbjct: 9   LATLDTFEQKLAKTSPVRRYGRLTRATGLVMEATGL--HLPLGATCLIERQNGSNIEEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFH-------WGRFRISPSACWCGRVINALGKP 112
            +V+  N + + + P+   E I  G  V+         G  ++       GRV++  G+P
Sbjct: 67  SEVVGFNGEKLLLMPLEDLEGIVPGARVYARPYSEDCGGGRQLPLGPELLGRVLDGAGRP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +DG  S    D S       PP   + R  +      G+R I+    +  GQR+G+FAGS
Sbjct: 127 LDGFPS---PDTSYRAPLTTPPINPLQRTPISDVLDVGVRAINALLTVGRGQRMGLFAGS 183

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPI 229
           G+GKS LL M AR    D +++ L+GERGREV++FIE+ LG   L +SVVV A +D SP+
Sbjct: 184 GVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAAGLARSVVVAAPADISPL 243

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           LR      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++
Sbjct: 244 LRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAK 303

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP
Sbjct: 304 LPALVERAGNGVNGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYP 363

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D  AS+SR           + V      +  ++  RD+  +G Y  G D +LDKA+  
Sbjct: 364 AIDIEASISRAMTALIDKQHYRRVQQFKQRLASYQRNRDLINVGAYAAGSDPLLDKAIEL 423

Query: 410 VPIIYDFLKQSPSDLSSEDV 429
            P +  FL+Q   + S  D 
Sbjct: 424 YPYMAQFLQQDIEERSEYDA 443


>gi|298487101|ref|ZP_07005151.1| type III secretion system ATPase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158344|gb|EFH99414.1| type III secretion system ATPase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 442

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG        +    +   PPA  +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E  L    + ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP  +  G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  +A+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAEMAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+
Sbjct: 382 LIARRQEIELLIQVGEYAVGSDPIADEAIARHSPIEAFLRQPPSE 426


>gi|171322220|ref|ZP_02911067.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171092457|gb|EDT37802.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 461

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 222/382 (58%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S   +V   GR  + P      GRV++ LG+P+D D 
Sbjct: 79  LAEVVGFSRQTTLLTPLGDVAGLSPETIVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 137

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 138 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 197

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 198 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 257

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 258 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 317

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 318 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 375

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 376 LSRVMPLVASRAHQQSAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 435

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q     S EDV F  +  KL
Sbjct: 436 CAQG----SHEDVRFDALLAKL 453


>gi|94496764|ref|ZP_01303339.1| type III secretion system ATPase [Sphingomonas sp. SKA58]
 gi|94423777|gb|EAT08803.1| type III secretion system ATPase [Sphingomonas sp. SKA58]
          Length = 436

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 219/355 (61%), Gaps = 5/355 (1%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           +++   G  R+  S    GRV++A  +P+DG   + +   S  + +  P  M RQR+++ 
Sbjct: 86  EVMVRVGEDRVPVSGALLGRVLDARLQPLDGRPPV-ETPASQPLYAAAPNPMERQRIDRQ 144

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
            +TG+R ID   PL  GQRIGVFA +G GKSTLL   AR    D ++I+L+GERGREVRE
Sbjct: 145 VETGVRAIDGLLPLGRGQRIGVFAAAGGGKSTLLGTLARQAQADVIVIALIGERGREVRE 204

Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           FIED LG + L +SVV+ +TSD   + R  A   A  IAE F ++G +VLL++DS+TRFA
Sbjct: 205 FIEDNLGSEGLARSVVIASTSDRPALERARAAHAATAIAEGFRAEGKHVLLLMDSVTRFA 264

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++REI   SGE PV RG+P SVF+ELPRL ER G      G IT + +VL++ +  +DP
Sbjct: 265 RALREIGLASGEPPVRRGFPPSVFAELPRLFERAGCD--ACGEITGIYTVLLE-EEEDDP 321

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           + + VRS+LDGH++L+R LA  G YP +D L S SRL  +     E++   S   ++ + 
Sbjct: 322 VGEEVRSLLDGHVILSRKLAARGHYPAIDILVSQSRLMGQLMEDGERRAALSFRAMLAKL 381

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +E   +  +G Y+PG D + D+A+ +   +  FL+QS  + +S  + + I +  +
Sbjct: 382 DEIELLLQVGDYKPGQDALADRAIARRDEMDGFLRQSTHETASLPMTRAILRGFE 436


>gi|330889058|gb|EGH21719.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 407

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 199/331 (60%), Gaps = 3/331 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REI    GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIPLAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +          L  R+++TRD+  +G Y  G
Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAG 406


>gi|32490806|ref|NP_871060.1| hypothetical protein WGLp057 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166012|dbj|BAC24203.1| fliI [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 458

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 215/363 (59%), Gaps = 9/363 (2%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           ICP   G  +   DL       R+ P      GRV+N+ GK +D    + K      + +
Sbjct: 88  ICP---GARVHSQDLYNSKISTRLLPIGYSLLGRVLNSSGKFLD-KLPVPKTYKKKSLYT 143

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           K    + R  ++K    G+R I+    +  GQR+G+F+GSG+GKS LL M A+    D +
Sbjct: 144 KPINPLLRDPIKKVLDVGVRAINGLLTVGIGQRMGIFSGSGVGKSILLGMMAKYTKADII 203

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ L+GERGREV++FIE+ LG+  + +SVV+ A +D SP+LR    + A  IAEYF  KG
Sbjct: 204 VVGLIGERGREVKDFIENILGEKGISRSVVIAAPADVSPMLRIQGAIYATRIAEYFRDKG 263

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLLI+DS+TR+A + REI+   GE P  +GYP SVF++L  L+ER G     KG+ITA
Sbjct: 264 KHVLLIMDSLTRYAMAQREISLAIGEPPATKGYPPSVFAKLSELVERTGNGTDNKGSITA 323

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL +GD+  DPIADS RSILDGHIVL+R L+E G YP +D  +S+SR      +   
Sbjct: 324 FYTVLTEGDDQQDPIADSSRSILDGHIVLSRFLSESGHYPSIDIESSISRTMSNIVTESH 383

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            K V  +  LI  +++ RD+  +G Y  G D ILD A+   P I  +LKQ   DL+    
Sbjct: 384 FKCVQKVKQLISSYQKNRDLLSVGAYSSGSDPILDIAIKNYPKIEKYLKQ---DLNQSCS 440

Query: 430 FQE 432
           ++E
Sbjct: 441 YEE 443


>gi|51596036|ref|YP_070227.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|51589318|emb|CAH20939.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           32953]
          Length = 466

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 129 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 187

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 188 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 247

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 248 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 307

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 308 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 367

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 368 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDP 427

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 428 LLDKAIALYPQMEAFLQQGMFERSSFD 454


>gi|161520296|ref|YP_001583723.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans ATCC 17616]
 gi|189353525|ref|YP_001949152.1| ATP synthase in type III secretion protein SctN [Burkholderia
           multivorans ATCC 17616]
 gi|160344346|gb|ABX17431.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans ATCC 17616]
 gi|189337547|dbj|BAG46616.1| ATP synthase in type III secretion protein SctN [Burkholderia
           multivorans ATCC 17616]
          Length = 462

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 6/380 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 80  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 138

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 139 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 198

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 199 LGMIARGAQADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 258

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 259 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 318

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 319 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 376

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 377 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 436

Query: 417 LKQSP-SDLSSEDVFQEITK 435
             Q+   D+  + +  ++TK
Sbjct: 437 CAQAQHEDVRFDALLAKLTK 456


>gi|186895141|ref|YP_001872253.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis PB1/+]
 gi|186698167|gb|ACC88796.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis PB1/+]
          Length = 472

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 135 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 193

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 194 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 253

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 254 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 313

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 314 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 373

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 374 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDP 433

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 434 LLDKAIALYPQMEAFLQQGMFERSSFD 460


>gi|269965702|ref|ZP_06179815.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
 gi|269829770|gb|EEZ84006.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
          Length = 439

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 203/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D A    P + ++L+QS
Sbjct: 401 AIDGAFTLKPKLDEYLQQS 419


>gi|50120656|ref|YP_049823.1| flagellum-specific ATP synthase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611182|emb|CAG74628.1| flagellum-specific ATP synthase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 457

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 194/318 (61%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   V P + R  ++     G+R I+    +  GQ
Sbjct: 118 GRVLDGSAKPLDGLPAPDTGYRAPLITPPVNP-LQRTAIDSVLDVGVRAINALLTVGRGQ 176

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 177 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 236

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 237 APADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKG 296

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 297 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 357 LAESGHYPAIDIEASISRAMTALIDEDHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 416

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LDKA+   P +  FL+Q
Sbjct: 417 MLDKAIRLYPHLEAFLQQ 434


>gi|117923588|ref|YP_864205.1| flagellar protein export ATPase FliI [Magnetococcus sp. MC-1]
 gi|117607344|gb|ABK42799.1| type III secretion system ATPase, FliI/YscN [Magnetococcus sp.
           MC-1]
          Length = 449

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 148/359 (41%), Positives = 219/359 (61%), Gaps = 4/359 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G  + I  G  +   GR    P      GRVI  +G+ +DG  +L   D  + +
Sbjct: 80  VLLMPLGSIKGIFPGSRIISQGRAEQVPVGPQLLGRVIGPMGEALDGH-ALPHLDDHVPL 138

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +     M R+++E+    G+R ++    +  GQR+G+FAG+G+GKSTLL M AR    D
Sbjct: 139 HAAPINPMLRRKIEEPLDLGVRAVNSLLTVGRGQRLGIFAGTGVGKSTLLGMMARYTAAD 198

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREV EFIED LG + + +S+V+VATSD+ P+LR  A   A  IAE+F +
Sbjct: 199 INVIALIGERGREVVEFIEDELGPEGMARSIVIVATSDQPPLLRLRAAYMATAIAEFFRA 258

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +  +VLL++DSITRFA + RE+   +GE P +RGYP S F  LPRLLER G  ++ +G+I
Sbjct: 259 QQKDVLLLMDSITRFAMAQREVGLATGEPPTSRGYPPSTFMLLPRLLER-GGRDQGRGSI 317

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +VL++GD+  DPI D+VR ILDGHIVL+R LA    YP +D   S+SRL +     
Sbjct: 318 TSIYTVLMEGDDIQDPIVDAVRGILDGHIVLSRDLAAANHYPAIDVNGSLSRLMEGLSEK 377

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             K+    L  ++  + +  D+  IG Y  G +  +D+A+  +  I  FLKQS  + S+
Sbjct: 378 AHKRAAGQLREILATYVKAEDMINIGAYVAGSNPRIDRAIRFIEPIRTFLKQSVEEPST 436


>gi|145598585|ref|YP_001162661.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
 gi|145210281|gb|ABP39688.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
          Length = 500

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 163 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 221

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 222 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 281

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 282 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 341

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 342 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 401

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 402 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 461

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 462 LLDKAIALYPQMEAFLQQGMFERSSFD 488


>gi|311105957|ref|YP_003978810.1| flagellar protein export ATPase FliI [Achromobacter xylosoxidans
           A8]
 gi|310760646|gb|ADP16095.1| flagellar protein export ATPase FliI [Achromobacter xylosoxidans
           A8]
          Length = 491

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/325 (43%), Positives = 202/325 (62%), Gaps = 6/325 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   +L+      + P ++R  ++    TG+R I+    + 
Sbjct: 142 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAQPINP-LSRAPIDTVLDTGVRAINGLLTVG 200

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 201 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIEHNLGPEGLARSV 260

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D S +LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 261 VVAAPADVSALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 320

Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP SVF++LP L+ER G   P    K G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 321 TKGYPPSVFAKLPMLVERAGMGAPGASGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 380

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H+VL+R LAE G YP +D  AS+SR      + ++  +V      + RF+  RD+  +G 
Sbjct: 381 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITPEQFAVVRRFKQSLSRFQRNRDLIAVGA 440

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y  G D  LD+A+ + P +  FL+Q
Sbjct: 441 YAAGNDPQLDEAIARYPRLEAFLQQ 465


>gi|71737205|ref|YP_274726.1| type III secretion component [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71557758|gb|AAZ36969.1| type III secretion component, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 442

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 162/408 (39%), Positives = 225/408 (55%), Gaps = 9/408 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG        +    +   PPA  +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E  L    + ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP  +  G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPPRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ + L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRHLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+  S
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSEHDS 429


>gi|170737794|ref|YP_001779054.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
 gi|169819982|gb|ACA94564.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
          Length = 458

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 76  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 134

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 135 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 194

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 255 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 314

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 315 AG--QGAHGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 372

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   +   + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 373 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 432

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+    S EDV F  +  KL
Sbjct: 433 CAQA----SDEDVRFDALLAKL 450


>gi|108807199|ref|YP_651115.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua]
 gi|108812457|ref|YP_648224.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|108776105|gb|ABG18624.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|108779112|gb|ABG13170.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua]
          Length = 506

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 169 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 227

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 228 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 287

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 288 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 347

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 348 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 407

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 408 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 467

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 468 LLDKAIALYPQMEAFLQQGMFERSSFD 494


>gi|254228439|ref|ZP_04921865.1| flagellar protein export ATPase FliI [Vibrio sp. Ex25]
 gi|262393591|ref|YP_003285445.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
 gi|151939027|gb|EDN57859.1| flagellar protein export ATPase FliI [Vibrio sp. Ex25]
 gi|262337185|gb|ACY50980.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
          Length = 439

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 203/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D A    P + ++L+QS
Sbjct: 401 AIDGAFTLKPKLDEYLQQS 419


>gi|259907609|ref|YP_002647965.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|224963231|emb|CAX54715.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|283477451|emb|CAY73367.1| flagellum-specific ATP synthase [Erwinia pyrifoliae DSM 12163]
          Length = 454

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 200/319 (62%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+DG  +  K   +      + P ++R  ++     G+R I+    +  GQ
Sbjct: 115 GRVLDAQGRPLDGRPAPLKTRCASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + ++++VV+ 
Sbjct: 174 RMGLFAGSGVGKSVLLGMMARFTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR    + A  +AE F  +G NVLLI+DS+TRFA + RE+A   GE P  +G
Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR   +     + + V S    +  ++   D+  +G Y  G D 
Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413

Query: 402 ILDKAVHQVPIIYDFLKQS 420
           +LD+A+ + P +  FL QS
Sbjct: 414 LLDRAIARYPQMESFLHQS 432


>gi|221200561|ref|ZP_03573603.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2M]
 gi|221209218|ref|ZP_03582209.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2]
 gi|221170908|gb|EEE03364.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2]
 gi|221179902|gb|EEE12307.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2M]
          Length = 459

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 160/382 (41%), Positives = 221/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 77  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 135

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 136 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 195

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 196 LGMIARGAQADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 255

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 256 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 315

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 316 AG--QGAAGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 373

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 374 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 433

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+      EDV F  +  KL
Sbjct: 434 CAQA----QHEDVRFDALLAKL 451


>gi|317492411|ref|ZP_07950840.1| flagellar protein export ATPase FliI [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919750|gb|EFV41080.1| flagellar protein export ATPase FliI [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 453

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 143/319 (44%), Positives = 196/319 (61%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++   KP+DG     + D+ S+  M   P  + R  +      G+R I+    +  G
Sbjct: 116 GRVLDGGAKPLDGLPPPEEADVGSLTTMPFNP--LQRTPIVDVLDVGVRAINALLTVGRG 173

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LGD   K+SVV+
Sbjct: 174 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGDEGRKRSVVI 233

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 234 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 293

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 294 GYPPSVFAKLPALVERAGNGTHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 353

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR      S D    V     L+  ++  RD+  +G Y  G D
Sbjct: 354 RLAEAGHYPAIDIEASISRAMTSLISDDHYARVRRFKQLLSSYQRNRDLISVGAYAKGSD 413

Query: 401 LILDKAVHQVPIIYDFLKQ 419
            +LD+A+   P +  FL+Q
Sbjct: 414 PMLDQAITLYPHLEAFLQQ 432


>gi|241763652|ref|ZP_04761702.1| ATPase FliI/YscN [Acidovorax delafieldii 2AN]
 gi|241367127|gb|EER61493.1| ATPase FliI/YscN [Acidovorax delafieldii 2AN]
          Length = 464

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 143/342 (41%), Positives = 208/342 (60%), Gaps = 4/342 (1%)

Query: 87  VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGF 145
           V   G  R+       GRV+++ G P+D    +   D++ E M +    AM+R  V +  
Sbjct: 111 VQRAGVLRLPMGEGLLGRVVDSQGLPLDHGGPVQ--DVASEPMDRRQINAMDRDPVREPL 168

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREF 205
            TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF
Sbjct: 169 DTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKEF 228

Query: 206 IEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +ED LG+  + +SVVV A +D  P+LR      A  +AE+F  KG +VLL++DS+TR+A 
Sbjct: 229 VEDILGEEGRARSVVVAAPADAPPLLRMQGAAYATAVAEHFRDKGKHVLLLMDSLTRYAM 288

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           + REIA   GE P  +GYP S F++LP+L+ER G      G+ITA  +VL +GD+  DPI
Sbjct: 289 AQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNGLHGVGSITAFYTVLSEGDDQQDPI 348

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
           AD+ R+ILDGHIVL+R+LAE G +P +D   S SR+     S +   L      +  R++
Sbjct: 349 ADAARAILDGHIVLSRALAETGHFPAIDIEQSASRVMHNVVSREHFDLARRFRAVYSRYQ 408

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           ++RD+  +G Y  G D  LD+A+   P +  FL+Q   D +S
Sbjct: 409 KSRDLVQVGAYMSGSDPALDEAIRLQPQMAAFLQQDMFDATS 450


>gi|149366225|ref|ZP_01888260.1| flagellum-specific ATP synthase [Yersinia pestis CA88-4125]
 gi|162420008|ref|YP_001606482.1| flagellum-specific ATP synthase [Yersinia pestis Angola]
 gi|165925906|ref|ZP_02221738.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938730|ref|ZP_02227285.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010789|ref|ZP_02231687.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166210732|ref|ZP_02236767.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400998|ref|ZP_02306501.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420359|ref|ZP_02312112.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425827|ref|ZP_02317580.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|218928948|ref|YP_002346823.1| flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|229896273|ref|ZP_04511443.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Pestoides A]
 gi|229897210|ref|ZP_04512366.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897937|ref|ZP_04513088.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902832|ref|ZP_04517949.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Nepal516]
 gi|270486618|ref|ZP_06203692.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294504006|ref|YP_003568068.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|115347559|emb|CAL20468.1| flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|149292638|gb|EDM42712.1| flagellum-specific ATP synthase [Yersinia pestis CA88-4125]
 gi|162352823|gb|ABX86771.1| flagellar protein export ATPase FliI [Yersinia pestis Angola]
 gi|165913344|gb|EDR31966.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922110|gb|EDR39287.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990133|gb|EDR42434.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207912|gb|EDR52392.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962054|gb|EDR58075.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049387|gb|EDR60795.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055226|gb|EDR65023.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229680279|gb|EEO76378.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Nepal516]
 gi|229688978|gb|EEO81043.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693547|gb|EEO83596.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701196|gb|EEO89225.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Pestoides A]
 gi|262366055|gb|ACY62612.1| flagellum-specific ATP synthase [Yersinia pestis D182038]
 gi|270335122|gb|EFA45899.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294354465|gb|ADE64806.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|320015434|gb|ADV99005.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 484

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 147 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 205

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 206 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 265

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 266 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 325

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 326 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 385

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 386 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 445

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 446 LLDKAIALYPQMEAFLQQGMFERSSFD 472


>gi|238897372|ref|YP_002923049.1| type III secretion system ATPase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465127|gb|ACQ66901.1| type III secretion system ATPase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 446

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 202/323 (62%), Gaps = 5/323 (1%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR++N LG PID    LG    S++  +  P  + R+ +     TGIR +D    
Sbjct: 107 SMSLMGRILNGLGHPIDDGPGLGYHWRSLD--NAPPDPLKRKPITDQLVTGIRSLDAILS 164

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216
              GQRIG+FA +G+GKSTLL M       D ++++L+GERGREVREF+E  L    + +
Sbjct: 165 CGEGQRIGIFAAAGVGKSTLLGMLCDGSDADVMVLALIGERGREVREFLEQVLTPKARQR 224

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +VVVVATSD   + R     TA TIAEYF   G  V+L++DS+TR+A + REI   +GE 
Sbjct: 225 TVVVVATSDRPALERLKGIYTATTIAEYFRDCGKKVVLMVDSLTRYARAAREIGLAAGEP 284

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A  +P SVF+++PRLLER G S+   G+ITA  +VLV+GD+ N+P+AD VRS+LDGHI
Sbjct: 285 PAAGSFPPSVFAQMPRLLERTGNSDL--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHI 342

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           +L+R LA  G YP +D  ASVSR+  +  S+   ++   L  ++ R+EE   +  +G Y+
Sbjct: 343 ILSRKLAGAGHYPAIDIAASVSRIMPQIASSWHLEMAQKLRFILARYEEIELLVRVGEYQ 402

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G DL  D A+ + P + +FLKQ
Sbjct: 403 KGQDLEADDALKRYPAVCNFLKQ 425


>gi|254496584|ref|ZP_05109452.1| flagellum-specific ATP synthase FliI [Legionella drancourtii
           LLAP12]
 gi|254354208|gb|EET12875.1| flagellum-specific ATP synthase FliI [Legionella drancourtii
           LLAP12]
          Length = 446

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 147/361 (40%), Positives = 216/361 (59%), Gaps = 3/361 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + VY+  +G  + ++ G ++   GR  ++       GR++N  G  ID    +
Sbjct: 63  EVVGFGNERVYLMSIGNIQGLAPGMIITPTGRVAQVEIGWSLLGRIVNGSGTLIDDGPPI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      + + P + R  ++     GIR I+    +  GQRIG+FAGSG+GKS LL 
Sbjct: 123 ELSETYPLECAAINP-LKRAAIDTYLDVGIRAINGLITIGRGQRIGLFAGSGVGKSVLLG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIE  LG+  LK++VVV A +DESP+ R      A
Sbjct: 182 MMTRFTKADVVVVGLIGERGREVKEFIECSLGEEGLKRAVVVAAPADESPLRRLHGAKVA 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G
Sbjct: 242 TSIAEYFRDQGKHVLLLMDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAEEG+YP +D  AS+S
Sbjct: 302 NGALGSGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLAEEGQYPAIDLEASIS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+        +   +      +  +E+ +D  L+G Y  G D  LDKA+     I  +++
Sbjct: 362 RVMQTVVPEQQMNDMLLFKKYLSLYEKNKDFILLGAYVKGSDPNLDKAILARDKIRKYME 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|115358971|ref|YP_776109.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria AMMD]
 gi|170702397|ref|ZP_02893286.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
 gi|115284259|gb|ABI89775.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria AMMD]
 gi|170132691|gb|EDT01130.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
          Length = 461

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 79  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 137

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 138 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 197

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 198 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 257

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 258 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 317

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 318 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 375

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 376 LSRVMPLVASRAHQQSAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 435

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q     S EDV F  +  KL
Sbjct: 436 CAQG----SHEDVRFDALLAKL 453


>gi|323491448|ref|ZP_08096632.1| flagellum-specific ATP synthase [Vibrio brasiliensis LMG 20546]
 gi|323314317|gb|EGA67397.1| flagellum-specific ATP synthase [Vibrio brasiliensis LMG 20546]
          Length = 440

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEKRASFNAEPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  S +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D A    P +  +L+QS
Sbjct: 401 AIDGAFTLKPKLDTYLQQS 419


>gi|238793334|ref|ZP_04636960.1| secretion system apparatus ATP synthase ssaN [Yersinia intermedia
           ATCC 29909]
 gi|238727303|gb|EEQ18831.1| secretion system apparatus ATP synthase ssaN [Yersinia intermedia
           ATCC 29909]
          Length = 433

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 10/369 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGK 111
           + D L +V+ I      + P      +  G  V    H  R ++ PS    GRV++ LG 
Sbjct: 46  SPDMLAEVVAIEQQTALLSPFTSSAGLRSGQWVSPLGHSHRVKVGPS--LLGRVLDGLGG 103

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
            +DG  SL  G    E+  + P  + RQ + +   TGIR ID       GQR+G+FA +G
Sbjct: 104 AMDGGPSL-IGHWR-ELDCQPPEPLARQPIRQILTTGIRAIDGVLSCGEGQRVGIFAAAG 161

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230
           +GKS+LLSM       D ++++L+GERGREVREF++  L    + ++VVVVATSD   + 
Sbjct: 162 VGKSSLLSMLCAGSNADVMVLALIGERGREVREFLDQVLTPETRARTVVVVATSDRPALE 221

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R     TA T+AEYF  +G  VLL++DS+TR+A + REI   +GELP A  +P SVF+ L
Sbjct: 222 RLKGIYTATTVAEYFRERGLKVLLMVDSLTRYARAAREIGLAAGELPAAGSFPPSVFAAL 281

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           PRLLER G SE   G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA  G YP 
Sbjct: 282 PRLLERAGNSEC--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPA 339

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  ASVSR+  +  + +   L   L  +   ++E   +  +G Y+ G D   D A+ + 
Sbjct: 340 IDIAASVSRIMPQIVTVEHLALAQKLRQIQACYQEIELLVRVGEYQAGQDPQADDALQRY 399

Query: 411 PIIYDFLKQ 419
           P I  FL+Q
Sbjct: 400 PKICAFLQQ 408


>gi|203284209|ref|YP_002221949.1| flagellum-specific ATP synthase [Borrelia duttonii Ly]
 gi|201083652|gb|ACH93243.1| flagellum-specific ATP synthase [Borrelia duttonii Ly]
          Length = 436

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 221/341 (64%), Gaps = 5/341 (1%)

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           + +GD V+   +  +I+ S    GRVI++LG+PID        +      S + P ++R 
Sbjct: 79  VEVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGPFFGNNYKELSFSSINP-LDRG 137

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
              +   TG+RV+D F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERG
Sbjct: 138 VFTEQIVTGVRVLDGFLPVARGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERG 197

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE+ EFI+  LG+    +SV++V+TSDESPI R     TA  +AEYF   G +V+L+ DS
Sbjct: 198 RELNEFIKYELGNGCFNRSVLIVSTSDESPISRYKGAYTATLVAEYFRDCGMDVMLLFDS 257

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA++ REI+ + GE P  +GYP SVF E+P LLER G +   KG+IT   +VLV+GD
Sbjct: 258 ITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERSGLN--AKGSITGFYTVLVEGD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + ++PI+D+++++LDGHI+L+R L+++G YP V+ L S SR   +  + +++KL+S + +
Sbjct: 316 DFSEPISDNMKAVLDGHIILDRDLSDKGIYPSVNILNSTSRSLHRIVNFEKQKLISKIRN 375

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L+  ++   D+   G Y  G +  +D A+ + P I DFL Q
Sbjct: 376 LLSIYKSYEDLIKTGIYVKGSNKEVDLAIAKYPKIIDFLSQ 416


>gi|170024619|ref|YP_001721124.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis YPIII]
 gi|169751153|gb|ACA68671.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII]
          Length = 472

 Score =  259 bits (662), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 197/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 135 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 193

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 194 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 253

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 254 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 313

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 314 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 373

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L   ++  RD+  +G Y  G D 
Sbjct: 374 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLFASYQRNRDLVSVGAYAAGSDP 433

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 434 LLDKAIALYPQMEAFLQQGMFERSSFD 460


>gi|329298596|ref|ZP_08255932.1| flagellum-specific ATP synthase [Plautia stali symbiont]
          Length = 451

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 196/327 (59%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  GKP+DG  +   G  +  I +   P + R  +     TG+R I+    +  GQ
Sbjct: 115 GRVLDGSGKPLDGLPAPETGYRAPLITAPFNP-LQRTPIHDVLDTGVRAINALLTVGRGQ 173

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE+ LG +   +SVV+ 
Sbjct: 174 RMGLFAGSGVGKSVLLGMMARYTKTDVIVVGLIGERGREVKEFIENILGAEGRARSVVIA 233

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 234 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 293

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHI L+R 
Sbjct: 294 YPPSVFAKLPALVERAGNGIHGCGSITAFYTVLTEGDDQQDPIADSARAILDGHIALSRR 353

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR             V     L+  F+  RD+  +G Y  G D 
Sbjct: 354 LAEAGHYPAIDIEASISRAMTALIDETHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDP 413

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LD+A+   P +  FL+Q   + S  D
Sbjct: 414 MLDRAIKLYPQMEAFLQQGIFERSDYD 440


>gi|308187293|ref|YP_003931424.1| flagellum-specific ATP synthase [Pantoea vagans C9-1]
 gi|308057803|gb|ADO09975.1| flagellum-specific ATP synthase [Pantoea vagans C9-1]
          Length = 456

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/319 (44%), Positives = 193/319 (60%), Gaps = 2/319 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+DG  S   G  +  I     P + R  +     TG+R I+    +  G
Sbjct: 116 LGRVLDGSGRPLDGLPSPDTGYRAPLITPPFNP-LQRTPITDVLDTGVRAINALLTVGRG 174

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+
Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 234

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 235 AAPADVSPLLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATK 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L E G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D
Sbjct: 355 RLGEAGHYPAIDIEASISRAMTSLIDENHYAQVRQFKQLLSSFQRNRDLVSVGAYAAGSD 414

Query: 401 LILDKAVHQVPIIYDFLKQ 419
            +LDKA+   P +  FL+Q
Sbjct: 415 PMLDKAIRLYPQMEAFLQQ 433


>gi|254506927|ref|ZP_05119066.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus 16]
 gi|219550212|gb|EED27198.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus 16]
          Length = 440

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEKRASFNAQPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  S +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSVCRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D A    P +  +L+QS
Sbjct: 401 AIDGAFTIKPKLDAYLQQS 419


>gi|298530640|ref|ZP_07018042.1| ATPase, FliI/YscN family [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510014|gb|EFI33918.1| ATPase, FliI/YscN family [Desulfonatronospira thiodismutans ASO3-1]
          Length = 471

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 154/371 (41%), Positives = 224/371 (60%), Gaps = 8/371 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V   P G    I  G L+ +     + P  + + G+ ++A G P++ D S+         
Sbjct: 70  VLFMPYGDMRGIKPGSLIRNSSMPPLFPVGSKYLGKAVDAFGTPLEDDGSIIPQKYYPLY 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            + + P M R R+++    GI+ I+    L  GQR+G+ AGSG+GKST + M AR    D
Sbjct: 130 AAPLNP-MQRPRIDEPLDVGIKSINSLLTLGKGQRVGIMAGSGVGKSTAMGMMARYTEAD 188

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+LVGERGREV EFI+  LG + + +SV+VVATSD+ P++R  A   A  +AEYF  
Sbjct: 189 VNVIALVGERGREVLEFIDKDLGPEGMARSVLVVATSDQGPLIRMRAAYAATAMAEYFRD 248

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL++DS+TRFA + RE+   +GE P  RGY  +VFS LP+LLER G S K  G+I
Sbjct: 249 QGKDVLLMMDSVTRFAMAAREVGLAAGEPPTTRGYTPTVFSHLPKLLERTGKSGK--GSI 306

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLV+GD+ N+P+AD+VRSILDGHIVL R LA++G +P +D L SVSRL       
Sbjct: 307 TGIYTVLVEGDDFNEPVADAVRSILDGHIVLTRELADQGHFPAIDVLKSVSRLRKDVTPE 366

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D  K    +  L+  +E+  D+  IG Y  G +  +D+AV  V  I DFL+Q   D+  +
Sbjct: 367 DVVKAGQKVIRLLAAYEKVEDMINIGAYVKGSNQEIDQAVRLVRPINDFLRQ---DIEEK 423

Query: 428 DVFQEITKKLQ 438
              Q+  +++Q
Sbjct: 424 FTLQQSFQQMQ 434


>gi|239996426|ref|ZP_04716950.1| flagellum-specific ATP synthase [Alteromonas macleodii ATCC 27126]
          Length = 444

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 157/409 (38%), Positives = 228/409 (55%), Gaps = 12/409 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S  +V  G  +  I      V C    + +G   + Q    +   +V+    DI Y+ P 
Sbjct: 18  SPPVVAAGKLVRGIGLTLEAVGC---QLPVGSQCLVQTIEGEIEAEVVGFGDDITYLMPT 74

Query: 76  GIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                I  G  V    R    P      GRV++  G+P+DG   LG+ +      +  PP
Sbjct: 75  EAVRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDG---LGEINAEARAPTTRPP 131

Query: 135 AMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            MN   R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V+
Sbjct: 132 -MNPLIRRPINTPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTRGCEADVVV 190

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + LVGERGREV+EFI + L +   +++VVV A +D SP++R     TAVTIAEYF  KG 
Sbjct: 191 VGLVGERGREVKEFIHEILTEEERQRAVVVAAPADTSPLMRLKGCETAVTIAEYFRDKGM 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G   + +G+ITA 
Sbjct: 251 KVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSERQGSITAF 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGH+VL+R+LA+ G YP +D  AS+SR+     S + +
Sbjct: 311 YTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMPMVVSEEHQ 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   +  +   +++ +D+  IG Y  G D  +D A+   P I   L+Q
Sbjct: 371 LMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINALLQQ 419


>gi|153949483|ref|YP_001401262.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|152960978|gb|ABS48439.1| flagellar protein export ATPase FliI [Yersinia pseudotuberculosis
           IP 31758]
          Length = 472

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 135 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 193

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 194 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 253

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 254 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 313

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 314 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 373

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 374 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDP 433

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 434 LLDKAIALYPQMEIFLQQGMFERSSFD 460


>gi|22126362|ref|NP_669785.1| flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45441383|ref|NP_992922.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|21959346|gb|AAM86036.1|AE013851_8 flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45436243|gb|AAS61799.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 492

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I   + P + R  + +    G+R I+    +  GQ
Sbjct: 155 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 213

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 214 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 273

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 274 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 333

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 334 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 393

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y  G D 
Sbjct: 394 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 453

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + SS D
Sbjct: 454 LLDKAIALYPQMEAFLQQGMFERSSFD 480


>gi|33592499|ref|NP_880143.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama
           I]
 gi|33572145|emb|CAE41689.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama
           I]
 gi|332381917|gb|AEE66764.1| flagellum-specific ATP synthase FliI [Bordetella pertussis CS]
          Length = 477

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 203/329 (61%), Gaps = 6/329 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   + +      + P ++R  ++     G+R I+    + 
Sbjct: 128 AMLGRVVDGAGRPLDGLGPLAGAEQAPLTALPINP-LSRAPIDSVLDVGVRAINGLLTVG 186

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 187 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 246

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A  +AE+F  +G +VLLI+DS+TRFA + REIA   GE P 
Sbjct: 247 VVAAPADVSPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPA 306

Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP SVF++LP L+ER G   P    K G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 307 TKGYPPSVFAKLPALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 366

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H+VL+R LAE G YP +D  AS+SR      + ++ + V     ++ R++  RD+  +G 
Sbjct: 367 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGA 426

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           Y  G D  LD A+ + P +  +L+Q+  D
Sbjct: 427 YVAGADPQLDDAIARYPRLEAYLQQNIGD 455


>gi|33601562|ref|NP_889122.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica
           RB50]
 gi|33575998|emb|CAE33078.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica
           RB50]
          Length = 491

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 203/329 (61%), Gaps = 6/329 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   + +      + P ++R  ++     G+R I+    + 
Sbjct: 142 AMLGRVVDGAGRPLDGLGPLAGAEQAPLTALPINP-LSRAPIDSVLDVGVRAINGLLTVG 200

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 201 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 260

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP+LR      A  +AE+F  +G +VLLI+DS+TRFA + REIA   GE P 
Sbjct: 261 VVAAPADVSPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPA 320

Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP SVF++LP L+ER G   P    K G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 321 TKGYPPSVFAKLPALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 380

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H+VL+R LAE G YP +D  AS+SR      + ++ + V     ++ R++  RD+  +G 
Sbjct: 381 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGA 440

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           Y  G D  LD A+ + P +  +L+Q+  D
Sbjct: 441 YVAGADPQLDDAIARYPRLEAYLQQNIGD 469


>gi|172063763|ref|YP_001811414.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
 gi|171996280|gb|ACB67198.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
          Length = 461

 Score =  259 bits (661), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 79  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 137

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 138 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 197

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 198 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 257

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 258 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 317

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 318 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 375

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 376 LSRVMPLVASRAHQQSAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 435

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q     S EDV F  +  KL
Sbjct: 436 CAQG----SHEDVRFDALLAKL 453


>gi|293605024|ref|ZP_06687418.1| flagellum-specific ATP synthase FliI [Achromobacter piechaudii ATCC
           43553]
 gi|292816573|gb|EFF75660.1| flagellum-specific ATP synthase FliI [Achromobacter piechaudii ATCC
           43553]
          Length = 499

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/345 (42%), Positives = 209/345 (60%), Gaps = 11/345 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   +L+      + P ++R  ++    TG+R I+    + 
Sbjct: 150 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAQPINP-LSRAPIDTVLDTGVRAINGLLTVG 208

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 209 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIEHNLGPEGLARSV 268

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D S +LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 269 VVAAPADVSALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 328

Query: 279 ARGYPTSVFSELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            +GYP SVF++LP L+ER G     PS K  G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 329 TKGYPPSVFAKLPMLVERAGMGAPGPSGK-AGSITAFYTVLAEGDDQQDPIADSARAILD 387

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GH+VL+R LAE G YP +D  AS+SR      +  +  +V      + R++  RD+  +G
Sbjct: 388 GHVVLSRHLAEAGHYPAIDIEASISRAMTSLITPQQFAIVRRFKQNLSRYQRNRDLIAVG 447

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            Y  G D  LD+A+ + P +  FL+Q   D+     + E   +L+
Sbjct: 448 AYAAGNDPQLDEAIARYPRLEAFLQQ---DIGENIGYDEAVNQLR 489


>gi|308050033|ref|YP_003913599.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
 gi|307632223|gb|ADN76525.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
          Length = 440

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/337 (43%), Positives = 216/337 (64%), Gaps = 4/337 (1%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++  G+PIDG   L K   LS  I +  P  + R+ ++     G+R I+    +  G
Sbjct: 99  GRVLDGCGEPIDGLGPLHKVRSLSGRIHTPNP--LLRRPIDAPLDVGVRAINSLLTVGKG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M  R    D V++ LVGERGREVREFIE  LG +  +++VVV
Sbjct: 157 QRLGLFAGSGVGKSVLLGMMTRFTQADIVVVGLVGERGREVREFIEHSLGPEGRQRAVVV 216

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           VA +D + ++R  A      IA  F  +G +VLL++DS+TR+A + RE+A + GE P  R
Sbjct: 217 VAPADATALMRLRAMRLCHRIAAGFRDEGHDVLLLVDSLTRYAQAQREVALSLGEPPATR 276

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP S F++LP L+E+ G  E  +G++TA+ +VLV+GD+ NDP+AD+ R+ILDGHIVL+R
Sbjct: 277 GYPPSAFTQLPSLVEQAGNGEGGQGSLTALYTVLVEGDDQNDPVADAARAILDGHIVLSR 336

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE+G +P +D  AS SRLA +    ++   +  L HL  R++E R++  +GGY+PG D
Sbjct: 337 ALAEQGHFPAIDVNASASRLAAQLVEPEDLAAMQRLRHLNARYQEVRELLPLGGYQPGQD 396

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             LD AV   P I  FL+Q  ++       +E  ++L
Sbjct: 397 AELDLAVQAQPAIAQFLRQGMNESQDYQASREALRQL 433


>gi|116692941|ref|YP_838474.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia HI2424]
 gi|116650941|gb|ABK11581.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia HI2424]
          Length = 458

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 76  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLD-DR 134

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 135 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 194

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 255 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 314

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 315 AG--QGAHGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 372

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   +   + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 373 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 432

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+    S EDV F  +  KL
Sbjct: 433 CAQA----SDEDVRFDALLAKL 450


>gi|238786394|ref|ZP_04630322.1| secretion system apparatus ATP synthase ssaN [Yersinia bercovieri
           ATCC 43970]
 gi|238712702|gb|EEQ04786.1| secretion system apparatus ATP synthase ssaN [Yersinia bercovieri
           ATCC 43970]
          Length = 429

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/405 (39%), Positives = 228/405 (56%), Gaps = 18/405 (4%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSA 99
           V LG+    Q +  D L +V+ I      + P      +  G  V    H  R R  P  
Sbjct: 32  VALGELC--QVEAPDMLAEVVAIEQKTALLSPFAPPAGLRCGQWVRPLGHSHRIRTGPD- 88

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    L +G    E+ S  P  + RQ +++   TGIR +D      
Sbjct: 89  -LLGRILDGLGVPIDSGPPL-RGHWC-ELDSAPPDPLARQPIDQILTTGIRAVDGLLSCG 145

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218
            GQRIG+FA +G+GKSTLLSM       + ++++L+GERGREVREF++  L    + ++V
Sbjct: 146 EGQRIGIFAAAGVGKSTLLSMLCAGSRAEVMVLALIGERGREVREFLDQVLTPEARARTV 205

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVATSD   + R     TA  +AEYF  +G  VLL+ DS+TR+A + REI   +GELP 
Sbjct: 206 VVVATSDRPALERLKGIYTATRVAEYFRDRGLKVLLMADSLTRYARAAREIGLAAGELPA 265

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A  +P SVF+ LPRLLER G S +  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL
Sbjct: 266 AGSFPPSVFAALPRLLERAGNSAQ--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVL 323

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA  G YP +D  ASVSR+  +  + +   L   L  +   ++E   +  +G Y+ G
Sbjct: 324 SRKLAGAGHYPAIDIAASVSRIMPQIVTDEHLALAQKLRQMQACYQEIELLVRVGEYQAG 383

Query: 399 VDLILDKAVHQVPIIYDFLKQ------SPSDLSSEDVFQEITKKL 437
            D   D+A+ + P I  FL+Q      +P  +S      ++ + L
Sbjct: 384 DDPQADEALARYPTICAFLQQENRLSCNPDAVSLSSTLAQLAQAL 428


>gi|78485780|ref|YP_391705.1| ATPase FliI/YscN [Thiomicrospira crunogena XCL-2]
 gi|78364066|gb|ABB42031.1| Flagellar biosynthesis ATPase FliI [Thiomicrospira crunogena XCL-2]
          Length = 446

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/411 (36%), Positives = 237/411 (57%), Gaps = 17/411 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           NL ++G  +  +     T+  +  Y  +G       KN   +  +V+  N D +Y+ P+G
Sbjct: 26  NLQIEGRLVRMVG---MTLEVVGTYAPIGSRCQVLSKNEPPIEAEVVGFNDDRLYLMPIG 82

Query: 77  IGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM-----S 130
               +     V    G  ++  S+   GR+I+  G P+D      KG +S +        
Sbjct: 83  KIHGLEPNARVIPVSGGIKVGVSSSMLGRIIDGAGNPLDD-----KGPISFDKRVSLNGD 137

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           K+ P ++R  +++    GI+ I+    L  GQR+G+ AG+G+GKS LL M  R    + V
Sbjct: 138 KINP-LHRAPIKEPLDVGIKTINGLLTLGKGQRVGLLAGTGVGKSVLLGMMTRFTDAEVV 196

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ LVGERGREV +F+ + LG+  LK+SVVV   +D+ P++R    + A ++AEYF  +G
Sbjct: 197 VVGLVGERGREVNDFVRNNLGEEGLKRSVVVATPADDPPLMRLHGAMLATSVAEYFRDQG 256

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            NVLL++DS+TRFA + REIA   GE P ++GYP SVF++LP+L+ER G      G+ITA
Sbjct: 257 KNVLLLMDSLTRFAQAQREIALAVGEPPASKGYPPSVFAKLPQLVERAGNGASHSGSITA 316

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VL +GD+ NDP+ DS R +LDGHI+L+R +A+ GRYP +D  AS+SR+        +
Sbjct: 317 IYTVLAEGDDQNDPVVDSARGVLDGHILLSRQIADSGRYPAIDIEASISRVMIDVVPQQQ 376

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            KL      L   +++ +D+  IG YR G D  +D+A+ + P +  FL QS
Sbjct: 377 NKLARRFKQLYSTYQQNQDLISIGAYRKGTDAAIDEAIEKHPQLSHFLSQS 427


>gi|304398858|ref|ZP_07380728.1| flagellar protein export ATPase FliI [Pantoea sp. aB]
 gi|304353562|gb|EFM17939.1| flagellar protein export ATPase FliI [Pantoea sp. aB]
          Length = 456

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 195/330 (59%), Gaps = 6/330 (1%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV++  G+P+DG   L   D         PP   + R  +     TG+R I+    + 
Sbjct: 116 LGRVLDGSGRPLDG---LPSPDTGYRAPLNTPPFNPLQRTPITDVLDTGVRAINALLTVG 172

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSV 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPA 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 293 TKGYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R L E G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G
Sbjct: 353 SRRLGEAGHYPAIDIEASISRAMTHLIDENHYAQVRQFKQLLSSFQRNRDLVSVGAYAAG 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            D +LDKA+   P +  FL+Q   + S  D
Sbjct: 413 SDPMLDKAITLYPQMEAFLQQGIFERSDYD 442


>gi|206563889|ref|YP_002234652.1| type III secretion ssytem protein [Burkholderia cenocepacia J2315]
 gi|18092674|gb|AAL59403.1| BcscN [Burkholderia cenocepacia]
 gi|28394255|gb|AAO31730.1| BcscN [Burkholderia cenocepacia]
 gi|198039929|emb|CAR55907.1| type III secretion ssytem protein [Burkholderia cenocepacia J2315]
          Length = 457

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 75  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLD-DR 133

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 134 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 193

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 194 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 253

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 254 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 313

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 314 AG--QGAHGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 371

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   +   + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 372 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 431

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+    S EDV F  +  KL
Sbjct: 432 CAQA----SDEDVRFDALLAKL 449


>gi|307546952|ref|YP_003899431.1| flagellar protein export ATPase FliI [Halomonas elongata DSM 2581]
 gi|307218976|emb|CBV44246.1| flagellar protein export ATPase FliI [Halomonas elongata DSM 2581]
          Length = 464

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 200/323 (61%), Gaps = 6/323 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTP 157
              GRV++  G P+D    LG  + +       PP   + R  ++     GIR I+    
Sbjct: 122 SLLGRVVDGNGDPLD---DLGPLEEAPRAPLAQPPFNPLARAPIDTQIDVGIRAINALLS 178

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216
           +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FI++ LG + + +
Sbjct: 179 VGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVQDFIDNILGAHGRER 238

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +VVV A +D SP+ R      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE 
Sbjct: 239 AVVVAAPADTSPLQRLQGASYATRIAEGFRDQGHDVLLIMDSLTRYAMAQREIALAIGEP 298

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP SVF++LP L+ER G +E+  G+ITA  +VL +GD+  DPIADS R+ILDGH+
Sbjct: 299 PATKGYPPSVFAKLPNLVERAGNAERGGGSITAFYTVLTEGDDQQDPIADSARAILDGHV 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R+LAE G YP +D  AS+SR  +      +++       L  R++  RD+  +G Y 
Sbjct: 359 VLSRTLAEAGHYPAIDIEASISRAMNAVIDDTQRRQAQRFKGLFSRYQRNRDLISVGAYH 418

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
           PG D  LD+AV + P +  FL+Q
Sbjct: 419 PGNDERLDEAVRRYPDLEAFLQQ 441


>gi|88704284|ref|ZP_01101998.1| flagellum-specific ATP synthase FliI [Congregibacter litoralis
           KT71]
 gi|88701335|gb|EAQ98440.1| flagellum-specific ATP synthase FliI [Congregibacter litoralis
           KT71]
          Length = 456

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 200/318 (62%), Gaps = 4/318 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+  G+ +DG  +      S+ + +K    ++R+ + +    G+R I+ F  +  GQ
Sbjct: 113 GRVIDGAGRYLDGGPAP-HCSHSVALRAKALNPLDRRPIREPLDVGVRAINAFLTMGKGQ 171

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKSTLL M  R    D +++ LVGERGREVREFIED LG   L +++VV 
Sbjct: 172 RLGLFAGSGVGKSTLLGMMTRHTEADVIVVGLVGERGREVREFIEDILGPQGLARAIVVA 231

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +D  P++R      A  IAEYF  +G +VLL++DS+TRFA + REI    GE PV++G
Sbjct: 232 TPADYPPLMRVHGAWRATAIAEYFRDQGRDVLLLMDSLTRFAQAQREIGLAVGEPPVSKG 291

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVFS LP L+ER G     +G+ITAV +VLV+GD+HNDPIAD+ R+ILDGHIVL+R 
Sbjct: 292 YPPSVFSLLPNLVERAG--NGPEGSITAVYTVLVEGDDHNDPIADAARAILDGHIVLSRQ 349

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G +P +D  ASVSR         ++ L  +L  L   + + RD+  IG Y  G D 
Sbjct: 350 VADSGLFPAIDLEASVSRAMPGIADEGQQDLARALKELYSVYRQNRDLISIGAYEHGSDP 409

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D+A+     +   ++Q
Sbjct: 410 KIDQALRAHEPLRQIIRQ 427


>gi|239815259|ref|YP_002944169.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
 gi|239801836|gb|ACS18903.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
          Length = 460

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/375 (44%), Positives = 228/375 (60%), Gaps = 18/375 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+ +    V + P G  E I+ G  V   G   +I       GRVI+  G+P+DG  
Sbjct: 65  LAEVVGLKPGRVTLMPYGPVEGIAAGCEVHALGADSQIGVGPAMLGRVIDGFGEPLDG-- 122

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            L K         K  P   M R  + +  +TG+R ID    L  GQRIG+FAGSG+GKS
Sbjct: 123 -LPKPVAIQRRPLKAAPINPMQRPPIRRILETGVRAIDGLLTLGQGQRIGIFAGSGVGKS 181

Query: 176 TLLSMFAR-------SDCFDKV-IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           TLL + AR       +D    + +I+L+GERGREVREFIE  LG + L +SVVVVATSD+
Sbjct: 182 TLLGLLARHVKAQGGADGSGGINVIALIGERGREVREFIEKQLGPEGLARSVVVVATSDQ 241

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             + R  A   A++IAEYF  +G NVLL +DSITRFA + RE+  ++GE P ARGY  SV
Sbjct: 242 PALARLRAAYAALSIAEYFRDEGRNVLLTMDSITRFAMARREVGLSAGEPPTARGYTPSV 301

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F+ELP L ER G +    G+ITA+++VLV+GD+ N+P++D++R+ILDGHIVL+R LA  G
Sbjct: 302 FAELPELCERCGMAPG-GGSITALLTVLVEGDDLNEPVSDALRAILDGHIVLSRQLAHRG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP +D L SVSRL  +     ++ L V+++ HL    E  R +  IG Y  G +  LD+
Sbjct: 361 HYPAIDVLKSVSRLMPELADEAQRSLAVAAMQHLAV-LERNRQMIDIGAYEKGANAELDR 419

Query: 406 AVHQVPIIYDFLKQS 420
           A+   P +  +L+QS
Sbjct: 420 AIDTEPGLQAWLRQS 434


>gi|294339865|emb|CAZ88228.1| flagellum-specific ATP synthase [Thiomonas sp. 3As]
          Length = 448

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/361 (40%), Positives = 221/361 (61%), Gaps = 3/361 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  N D V +  +G  + ++ G  V    G  RI       GRV++  G+P+DGD +L
Sbjct: 65  EVVGFNGDHVQLMALGEVQGLTPGARVHPVPGDIRIPVGPELLGRVLDGNGRPLDGDGAL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +     ++ P + R  V +    G+R I+    +  G R+G+FAGSG+GKS LL 
Sbjct: 125 LASHYTTLSTQQINP-LARALVRQPLDVGVRAINALFTVGRGARMGLFAGSGVGKSVLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D +++ L+GERGREV+EFIED LG +   ++VVV A +D   + R      A
Sbjct: 184 MMARNTNADVIVVGLIGERGREVKEFIEDILGVEGRSRAVVVAAPADAPALTRIRGARLA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEY+  +G NVLL++DS+TR+A ++RE+A  +GE P ARG+P SVF++LP L+ER G
Sbjct: 244 TAMAEYYRDQGLNVLLLMDSVTRYALALREVALAAGEPPAARGFPPSVFAKLPALVERAG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              +  G+ITA  +VL++GD+  DP+AD+VR+ILDGHIVL+R LAE+G +P +D  AS+S
Sbjct: 304 NGPEGGGSITAFYTVLMEGDDQQDPVADNVRAILDGHIVLSRRLAEQGHFPAIDLQASIS 363

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +  E + +  L  +  R+   +D+  +G Y PG DL LD+AV     I +FL 
Sbjct: 364 RVMPAIATPLELRRMQKLKEMQSRYASQQDLIAVGAYTPGADLQLDQAVQAHAGIREFLI 423

Query: 419 Q 419
           Q
Sbjct: 424 Q 424


>gi|126031489|pdb|2OBL|A Chain A, Structural And Biochemical Analysis Of A Prototypical
           Atpase From The Type Iii Secretion System Of Pathogenic
           Bacteria
 gi|126031490|pdb|2OBM|A Chain A, Structural And Biochemical Analysis Of A Prototypical
           Atpase From The Type Iii Secretion System Of Pathogenic
           Bacteria
          Length = 347

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/336 (42%), Positives = 201/336 (59%), Gaps = 2/336 (0%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  +I       GR+I+ +G+P++ +           + ++ P  + RQ +++ F  G+R
Sbjct: 1   GSHKIRVGDALLGRLIDGIGRPMESNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVR 60

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERGREV EF+    
Sbjct: 61  AIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERGREVNEFLALLP 120

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+TR+A + R++ 
Sbjct: 121 QSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVG 180

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             SGE  V  G+P SVFS LP+LLER GP+   KG+ITA+ +VL++ DN NDPI D VRS
Sbjct: 181 LASGEPDVRGGFPPSVFSSLPKLLERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRS 238

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    LI  ++    + 
Sbjct: 239 ILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKLIATYKNPELLI 298

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            IG Y  G D   DKA+    +I +F++QS  D+SS
Sbjct: 299 RIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISS 334


>gi|269103171|ref|ZP_06155868.1| flagellum-specific ATP synthase FliI [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163069|gb|EEZ41565.1| flagellum-specific ATP synthase FliI [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 437

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 207/322 (64%), Gaps = 10/322 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPL 158
           GRVI+ +G P+DG      GD+ +    S   PA+N   R+ +++    G++ I+    +
Sbjct: 101 GRVIDGVGNPLDG-----LGDIYTQHRASFSAPAINPLKRKPIKEPLDVGLKAINGCLTV 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKS 217
             GQRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFI++ LG+   ++S
Sbjct: 156 GKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIDEILGEEGRQRS 215

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P
Sbjct: 216 VVVAAPADASPLMRLKGCQTALTIAEYFRDQGQDVLLLMDSLTRFAQAQREIALSVGEPP 275

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP L+ER G  ++ +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIV
Sbjct: 276 ATKGYPPSVFAKLPALVERAGNGDENQGSITAFFTVLSEGDDLQDPIADASRAILDGHIV 335

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R +A+ G YP +D   SVSR+     + +   +  ++  ++    + +D+  IG Y+P
Sbjct: 336 LSREMADAGHYPAIDVERSVSRVMPAIVTEEHMIMAKAVRQILSICRKNQDLVAIGAYKP 395

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
           G D  +D+A    P +  FL+Q
Sbjct: 396 GTDPNIDQAFSLKPRLDGFLQQ 417


>gi|203287748|ref|YP_002222763.1| flagellum-specific ATP synthase [Borrelia recurrentis A1]
 gi|201084968|gb|ACH94542.1| flagellum-specific ATP synthase [Borrelia recurrentis A1]
          Length = 436

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 221/341 (64%), Gaps = 5/341 (1%)

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I +GD V+   +  +I+ S    GRVI++LG+PID        +      S + P ++R 
Sbjct: 79  IKVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGPFFGNNYKELSFSSINP-LDRG 137

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
              +   TG+RV+D F P+  GQR+G+F+G+G+GKSTLL M A++   D  +I+ +GERG
Sbjct: 138 VFTEQIVTGVRVLDGFLPVARGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERG 197

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE+ EFI+  LG+    +SV++V+TSDESPI R     TA  +AE+F   G +V+L+ DS
Sbjct: 198 RELNEFIKYELGNGCFNRSVLIVSTSDESPISRYKGAYTATLVAEHFRDCGMDVMLLFDS 257

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ITRFA++ REI+ + GE P  +GYP SVF E+P LLER G +   KG+IT   +VLV+GD
Sbjct: 258 ITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERSGLN--AKGSITGFYTVLVEGD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + ++PI+D+++++LDGHI+L+R L+++G YP V+ L S SR   +  + +++KL+S + +
Sbjct: 316 DFSEPISDNMKAVLDGHIILDRDLSDKGIYPSVNILNSTSRSLHRIVNFEKQKLISKIRN 375

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L+  ++   D+   G Y  G +  +D A+ + P I DFL Q
Sbjct: 376 LLSIYKSYEDLIKTGIYVKGSNKEVDLAIAKYPKIIDFLSQ 416


>gi|148976416|ref|ZP_01813122.1| flagellum-specific ATP synthase [Vibrionales bacterium SWAT-3]
 gi|145964239|gb|EDK29495.1| flagellum-specific ATP synthase [Vibrionales bacterium SWAT-3]
          Length = 439

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 203/321 (63%), Gaps = 8/321 (2%)

Query: 103 GRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           GRVI+ +G P+DG   +    +   S E ++     + R+ + +    G++ I+    + 
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASFSAEPINP----LARKPISEPLDVGLKAINGLLTVG 157

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  K+SV
Sbjct: 158 KGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSV 217

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D SP++R     TA+T+AEYF  +G +VLL++DS+TRFA + REIA + GE P 
Sbjct: 218 VVAAPADSSPLMRLKGCQTALTVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPA 277

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL
Sbjct: 278 TKGYPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVL 337

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R +A+ G YP +D   SVSR   +  + +   +  ++  ++    + +D+  IG Y+PG
Sbjct: 338 SREMADAGHYPAIDVEKSVSRAMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPG 397

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D  +D A    P + ++L+Q
Sbjct: 398 TDPAIDSAFTLKPKLDEYLQQ 418


>gi|322378954|ref|ZP_08053368.1| flagellum-specific ATP synthase [Helicobacter suis HS1]
 gi|321148630|gb|EFX43116.1| flagellum-specific ATP synthase [Helicobacter suis HS1]
          Length = 434

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/397 (37%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWC 102
           LGD V V +    + LG V+ +        P    E   +GD V         P      
Sbjct: 40  LGDMVQVERADGGECLGMVVVVEKTQFGFTPFSFVEGCKVGDRVLFVKEGLSFPVGQGLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG P+D    +     +  +++ + P ++R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLDPLGNPLDKLGFVRASGFAPVMLAPIKP-LDRAIIDEPFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFI   L  NL+ +V++VA
Sbjct: 159 KMGIFAGSGVGKSTLMGMVVRGCSASIKVIALIGERGREIPEFIHKNLQGNLENTVLIVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD++P++RK     A+++AEYF ++G +VL ++DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDAPLMRKYGAFCAMSVAEYFKNQGHDVLFMMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  + LP+L+ER G  E+ KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALTLLPQLMERAG-KEQNKGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR++ +  S D          L    +E   +  IG Y+ G D  
Sbjct: 338 TDHGIYPPINILHSASRVSKEVSSHDHMLAARKFRKLYALLKENEVLIRIGSYQRGFDPD 397

Query: 403 LDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
           LD+A+ +   +  FL Q   + + S    QE+ + +Q
Sbjct: 398 LDEAMDKKAKMDAFLAQEEEEVVPSSQSIQELQEIMQ 434


>gi|292487989|ref|YP_003530866.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
 gi|292899209|ref|YP_003538578.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291199057|emb|CBJ46168.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291553413|emb|CBA20458.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
 gi|312172114|emb|CBX80371.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC BAA-2158]
          Length = 453

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/328 (42%), Positives = 198/328 (60%), Gaps = 2/328 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+DG  +   G  +  I     P + R  + +   TG+R I+    +  G
Sbjct: 116 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITEVLDTGVRAINALLTVGRG 174

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++VV+
Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVI 234

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 235 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR+            V     L+  ++  RD+  +G Y  G D
Sbjct: 355 RLAESGHYPAIDIEASISRVMAHLIDETHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
             LDKA+   P +  FL+Q   + S+ D
Sbjct: 415 PTLDKAIKLYPELEAFLQQGMFERSTFD 442


>gi|322379808|ref|ZP_08054105.1| flagellum-specific ATP synthase [Helicobacter suis HS5]
 gi|321147776|gb|EFX42379.1| flagellum-specific ATP synthase [Helicobacter suis HS5]
          Length = 436

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/397 (37%), Positives = 228/397 (57%), Gaps = 5/397 (1%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWC 102
           LGD V V +    + LG V+ +        P    E   +GD V         P      
Sbjct: 40  LGDMVQVERADGGECLGMVVVVEKTQFGFTPFSFVEGCKVGDRVLFVKEGLSFPVGQGLL 99

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG P+D    +     +  +++ + P ++R  +++ F  G++ ID       GQ
Sbjct: 100 GRVLDPLGNPLDKLGFVRASGFAPVMLAPIKP-LDRAIIDEPFSVGVKSIDGLLTCGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFI   L  NL+ +V++VA
Sbjct: 159 KMGIFAGSGVGKSTLMGMVVRGCSASIKVIALIGERGREIPEFIHKNLQGNLENTVLIVA 218

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD++P++RK     A+++AEYF ++G +VL ++DS+TRFA + REI    GE P ++GY
Sbjct: 219 TSDDAPLMRKYGAFCAMSVAEYFKNQGHDVLFMMDSVTRFAMAQREIGLALGEPPTSKGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  + LP+L+ER G  E+ KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L
Sbjct: 279 PPSALTLLPQLMERAG-KEQNKGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSREL 337

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            + G YPP++ L S SR++ +  S D          L    +E   +  IG Y+ G D  
Sbjct: 338 TDHGIYPPINILHSASRVSKEVSSHDHMLAARKFRKLYALLKENEVLIRIGSYQRGFDPD 397

Query: 403 LDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
           LD+A+ +   +  FL Q   + + S    QE+ + +Q
Sbjct: 398 LDEAMDKKAKMDAFLAQEEEEVVPSSQSIQELQEIMQ 434


>gi|149908767|ref|ZP_01897428.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36]
 gi|149808309|gb|EDM68248.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36]
          Length = 444

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/376 (39%), Positives = 220/376 (58%), Gaps = 21/376 (5%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC---------WCGR 104
            N     +V+  N DI Y+ P        L   V  +   R+SP +            GR
Sbjct: 55  NNGSLAAEVVGFNRDISYLMP--------LQHAVGLFSGARVSPQSGIENIVVGEQLLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ L +P+DG  ++    + +  +   P  ++RQ + +    GIR I+       GQR+
Sbjct: 107 VVDGLLQPLDGLPAITGESIPLFSLPNNP--LSRQPISEPIDVGIRCINAVLTPGKGQRL 164

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVAT 223
           G+FAGSG+GKS LL M  R    + +I+ L+GERGREVREFIE  LG+   K+++VV A 
Sbjct: 165 GLFAGSGVGKSVLLGMMTRYTEAEIIIVGLIGERGREVREFIEHSLGEEGRKRAIVVAAP 224

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +D + ++R  A      +AE+F  +G +VLL++DS+TR+A + REI    GE P  +GYP
Sbjct: 225 ADATALMRLRAAQVCHRLAEHFRDQGKHVLLLMDSLTRYAQAQREIGLAMGEPPATKGYP 284

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SVFS L +L+ER G +    G++TA+ +VLV+GDN  +PIAD+ R+ILDGHIVL+R LA
Sbjct: 285 PSVFSLLTQLVERAG-NGLGSGSMTAIYTVLVEGDNQQEPIADAARAILDGHIVLSRDLA 343

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E+G YP +D  AS+SR+  +    D       L  L   +++ R++  +GGY+PG D+ +
Sbjct: 344 EQGHYPAIDISASISRVMPQVVKKDYLAHAIKLKKLYSSYQQIRELIPLGGYQPGKDMQV 403

Query: 404 DKAVHQVPIIYDFLKQ 419
           D AV + P I  FL+Q
Sbjct: 404 DYAVQKFPAIAAFLQQ 419


>gi|229522083|ref|ZP_04411500.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TM 11079-80]
 gi|229341008|gb|EEO06013.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TM 11079-80]
          Length = 439

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 206/321 (64%), Gaps = 6/321 (1%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI+ +G P+DG   +  +   S+  M   P  + R+ + +    GI+ I+    +  G
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV
Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +
Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399
            +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG 
Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D  +D A    P +  +L+Q+
Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419


>gi|327394268|dbj|BAK11690.1| flagellum-specific ATP synthase FliI [Pantoea ananatis AJ13355]
          Length = 453

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 6/328 (1%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           RV++  G+P+DG   L   +         PP   + R  +     TG+R I+    +  G
Sbjct: 118 RVLDGSGRPLDG---LPSPETGYRAALNTPPFNPLQRTPITDVLDTGVRAINALLTVGRG 174

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+
Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 234

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 235 AAPADVSPLLRLQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATK 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D
Sbjct: 355 RLAEAGHYPAIDIEASISRAMTSLIDENHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +LDKA+   P +  FL+Q   + S  D
Sbjct: 415 PMLDKAIQLYPQMEAFLQQGIFERSEYD 442


>gi|238755310|ref|ZP_04616653.1| Flagellum-specific ATP synthase [Yersinia ruckeri ATCC 29473]
 gi|238706446|gb|EEP98820.1| Flagellum-specific ATP synthase [Yersinia ruckeri ATCC 29473]
          Length = 454

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 195/318 (61%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  +   V P + R  +E+    G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLMTPPVNP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR        +    V     L+  ++  RD+  +G Y  G D 
Sbjct: 356 LAESGNYPAIDIEASISRAMTSLIDDNHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD+A+   P +  FL+Q
Sbjct: 416 LLDRAILLYPQMETFLQQ 433


>gi|291617851|ref|YP_003520593.1| FliI [Pantoea ananatis LMG 20103]
 gi|291152881|gb|ADD77465.1| FliI [Pantoea ananatis LMG 20103]
          Length = 463

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 6/328 (1%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           RV++  G+P+DG   L   +         PP   + R  +     TG+R I+    +  G
Sbjct: 128 RVLDGSGRPLDG---LPSPETGYRAALNTPPFNPLQRTPITDVLDTGVRAINALLTVGRG 184

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+
Sbjct: 185 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 244

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 245 AAPADVSPLLRLQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATK 304

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 305 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 364

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D
Sbjct: 365 RLAEAGHYPAIDIEASISRAMTSLIDENHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSD 424

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +LDKA+   P +  FL+Q   + S  D
Sbjct: 425 PMLDKAIQLYPQMEAFLQQGIFERSEYD 452


>gi|261821170|ref|YP_003259276.1| flagellum-specific ATP synthase [Pectobacterium wasabiae WPP163]
 gi|261605183|gb|ACX87669.1| flagellar protein export ATPase FliI [Pectobacterium wasabiae
           WPP163]
          Length = 456

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 196/327 (59%), Gaps = 2/327 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I     P + R  +E     G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPDTGYRAPLITPPFNP-LQRTPIESVLDVGVRAINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR             V     L+  ++  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +LDKA+   P +  FL+Q   + S+ D
Sbjct: 416 MLDKAIRLYPHLEAFLQQGMFEQSNYD 442


>gi|46447031|ref|YP_008396.1| type III secretion system ATPase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400672|emb|CAF24121.1| probable type III secretion pathway protein sctN [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 454

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/390 (40%), Positives = 228/390 (58%), Gaps = 24/390 (6%)

Query: 60  GQVIRINLDIVYICPVG----IG--EEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113
            +V+    D V + P+G    IG   E+    L  H    ++ P     GR++N LG+P+
Sbjct: 74  AEVVGFTKDEVLLSPLGEMTGIGPSSEVIPTHLPLH---IKVGPQ--LLGRILNGLGEPL 128

Query: 114 DGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           D +    KG L +E    ++   P  + R  +      GIR ID       GQR+G+FA 
Sbjct: 129 DEET---KGPLILEETYPVIQAPPDPVKRMPIHNPISVGIRAIDGVLTTGLGQRVGIFAA 185

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
           +G GKSTLL M AR+   D  +ISL+GERGRE+REFIE  LG + LK+SV+VV+TSD++ 
Sbjct: 186 AGGGKSTLLGMIARNAVADVNVISLIGERGRELREFIEKDLGPEGLKRSVLVVSTSDQAS 245

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            LR  A      IAEYF  +G +V+L++DS+TRFA ++RE+   +GE P   GY  SVFS
Sbjct: 246 QLRLNAAYVGTAIAEYFRDQGKSVILMMDSVTRFARALREVGLAAGEPPARAGYTPSVFS 305

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LP+LLER G S+K  G+ITA  ++LV GD+ N+P+AD VRSILDGHI+L+  LA +  Y
Sbjct: 306 TLPKLLERAGNSDK--GSITAFYTILVAGDDMNEPVADEVRSILDGHIILSSELARQYHY 363

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D L+S SR+ +     +  +LV  L  ++  +++   +  IG Y+ G D   D A+ 
Sbjct: 364 PAIDVLSSASRVMNAIVPKEHLQLVGKLKEVLANYKKNELLIKIGEYKRGADKAGDFAID 423

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +  +  FLKQ   +  S   FQE  + L+
Sbjct: 424 YIEKVLKFLKQGVDEKCS---FQETVQLLK 450


>gi|74317621|ref|YP_315361.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Thiobacillus denitrificans ATCC 25259]
 gi|74057116|gb|AAZ97556.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Thiobacillus denitrificans ATCC 25259]
          Length = 468

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 202/322 (62%), Gaps = 2/322 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+++ G+P+DG  S+     +  + ++    ++R  + +    G+R I+    + 
Sbjct: 127 VLLGRVLDSNGRPLDGLGSV-HTSATAPLNNRAANPLSRAPISEILDVGVRAINSMLTIG 185

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG+  L ++V
Sbjct: 186 RGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIEQILGEEGLARAV 245

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D  P++R      A  IAE+F  +G NVLLI+DS+TR+A + REIA   GE P 
Sbjct: 246 VVAAPADTPPLMRLQGAAYATAIAEHFRDEGKNVLLIMDSLTRYAMAQREIALAIGEPPA 305

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G  +   G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 306 TKGYPPSVFAKLPALVERAGNGKPGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D   S+SR      SA  +++   L  L  R+  +RD+  +G Y PG
Sbjct: 366 SRDLAESGHYPAIDIEQSISRAMHGITSAAHQQMARRLKKLYSRYARSRDLINVGAYAPG 425

Query: 399 VDLILDKAVHQVPIIYDFLKQS 420
            D +LD+A+     I  FL+Q+
Sbjct: 426 TDPLLDEAIRLQEGIEAFLQQN 447


>gi|260767703|ref|ZP_05876638.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
 gi|260617212|gb|EEX42396.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
 gi|315179465|gb|ADT86379.1| flagellum-specific ATP synthase FliI [Vibrio furnissii NCTC 11218]
          Length = 440

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 205/323 (63%), Gaps = 4/323 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASFNAQPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHVLMSKAVRQILSICRKNQDLVSIGAYKPGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQSPSD 423
             +D A    P + ++L+Q   D
Sbjct: 400 QAIDSAFTLKPKLDNYLQQGMKD 422


>gi|312173318|emb|CBX81573.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC BAA-2158]
          Length = 454

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 134/319 (42%), Positives = 200/319 (62%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+DG  +  K   +      + P ++R  ++     G+R I+    +  GQ
Sbjct: 115 GRVLDAQGRPLDGRPAPLKTSSASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + ++++VV+ 
Sbjct: 174 RMGLFAGSGVGKSVLLGMMARYTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR    + A  +AE F  +G NVLLI+DS+TRFA + RE+A   GE P  +G
Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR   +     + + V S    +  ++   D+  +G Y  G D 
Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413

Query: 402 ILDKAVHQVPIIYDFLKQS 420
           +LD+A+ + P +  +L Q+
Sbjct: 414 LLDRAIARYPQMESYLHQA 432


>gi|218549266|ref|YP_002383057.1| flagellum-specific ATP synthase [Escherichia fergusonii ATCC 35469]
 gi|218356807|emb|CAQ89435.1| flagellum-specific ATP synthase [Escherichia fergusonii ATCC 35469]
          Length = 457

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 116 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 174

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 175 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 234

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 235 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 294

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 295 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 354

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 355 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 414

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 415 SDPMLDKAIALWPQLEGFLQQ 435


>gi|310767341|gb|ADP12291.1| flagellum-specific ATP synthase [Erwinia sp. Ejp617]
          Length = 453

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/328 (42%), Positives = 198/328 (60%), Gaps = 2/328 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+DG  +   G  +  I     P + R  + +   TG+R I+    +  G
Sbjct: 116 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITEVLDTGVRAINALLTVGRG 174

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++VV+
Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVI 234

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 235 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR+            V     L+  ++  RD+  +G Y  G D
Sbjct: 355 RLAESGHYPAIDIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
             LDKA+   P +  FL+Q   + S+ D
Sbjct: 415 PTLDKAIKLYPELEAFLQQGMFERSTFD 442


>gi|188534123|ref|YP_001907920.1| flagellum-specific ATP synthase [Erwinia tasmaniensis Et1/99]
 gi|188029165|emb|CAO97037.1| Flagellum-specific ATP synthase [Erwinia tasmaniensis Et1/99]
          Length = 452

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/328 (43%), Positives = 197/328 (60%), Gaps = 2/328 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+DG  +   G  +  I     P + R  +     TG+R I+    +  G
Sbjct: 115 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITDVLDTGVRAINALLTVGRG 173

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+
Sbjct: 174 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARSVVI 233

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 234 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 293

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 294 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 353

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR+            V     L+  ++  RD+  +G Y  G D
Sbjct: 354 RLAESGHYPAIDIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 413

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
             LDKA+   P +  FL+Q   + S+ D
Sbjct: 414 PTLDKAIKLYPELEAFLQQGMFERSTFD 441


>gi|330963705|gb|EGH63965.1| type III secretion component [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 442

 Score =  257 bits (657), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 162/425 (38%), Positives = 230/425 (54%), Gaps = 14/425 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQ 61
           +LE   QLA+          G + SI  V    +     V +G+  + +  G   +   +
Sbjct: 11  DLERRLQLAQPRPMR-----GTLRSIRGVLLRASVAG--VRIGELCLLRDPGNGRELSAE 63

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI  + D   + P+G  E +S    +   G+   +       GRVI+ +G+ +DG   + 
Sbjct: 64  VIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPIA 123

Query: 121 KGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              L    +   PPA  +RQR+ K    G+R ID    L  GQR+G+F   G+GKS+LL+
Sbjct: 124 ALGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEPGVGKSSLLA 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
              R+   D ++I L+GERGREVRE +E  L    + ++V VVATSD     R  A   A
Sbjct: 184 SIVRNSDADVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            T+AEY   +G NVLL++DS+TRFA + REI    GE P  RGYP S FS LPRLLER G
Sbjct: 244 TTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P     G+ITA+ +VL +GD   DP+A+  RSILDGHIVL+  LA+   +P +D L S S
Sbjct: 304 PGPS--GSITALYTVLTEGDATTDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL D   + + K+L S L  LI R +E   +  +G Y  G D + D+A+ +   I  FL+
Sbjct: 362 RLMDHVATPEHKRLASRLRELIARRQEIELLIQVGEYAAGSDPLADEAIIRHSAIEAFLR 421

Query: 419 QSPSD 423
           Q  ++
Sbjct: 422 QPAAE 426


>gi|324114216|gb|EGC08189.1| ATPase FliI/YscN family protein [Escherichia fergusonii B253]
 gi|325497683|gb|EGC95542.1| flagellum-specific ATP synthase [Escherichia fergusonii ECD227]
          Length = 456

 Score =  257 bits (657), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAIALWPQLEGFLQQ 434


>gi|320198631|gb|EFW73231.1| Flagellum-specific ATP synthase FliI [Escherichia coli EC4100B]
          Length = 457

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 145/324 (44%), Positives = 198/324 (61%), Gaps = 8/324 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFT 156
              GRV++  GKP+DG  S      +ME  + + P  N   R  +E    TG+R I+   
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPD----TMETGALITPPFNPLQRTPIEHVLDTGVRPINALL 170

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   
Sbjct: 171 TVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRA 230

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE
Sbjct: 231 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 290

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 291 PPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 350

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y
Sbjct: 351 IVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAY 410

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D +LDKA+   P +  +L+Q
Sbjct: 411 AKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|261252325|ref|ZP_05944898.1| flagellum-specific ATP synthase FliI [Vibrio orientalis CIP 102891]
 gi|260935716|gb|EEX91705.1| flagellum-specific ATP synthase FliI [Vibrio orientalis CIP 102891]
          Length = 440

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 208/336 (61%), Gaps = 2/336 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTEKRASFNAEPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    ++G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSPDQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  S +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +D A    P +  +L+Q+  +    D+   +  +L
Sbjct: 401 AIDGAFTIKPKLDAYLQQTMKETVPYDMCVNMLSRL 436


>gi|262404476|ref|ZP_06081031.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC586]
 gi|262349508|gb|EEY98646.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC586]
          Length = 439

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 205/320 (64%), Gaps = 4/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +    + + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTDQRASFNAAPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQS 420
             +D A    P +  +L+Q+
Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419


>gi|86157817|ref|YP_464602.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774328|gb|ABC81165.1| type III secretion system ATPase, FliI/YscN [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 452

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/336 (42%), Positives = 207/336 (61%), Gaps = 13/336 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSM-----EIMSKVPPAMNRQRVEKGFKTG 148
           RI       GRV++A  +P+DG      G + +      + +  PPA++R+RVE+    G
Sbjct: 93  RIPVDEALLGRVVDASLRPVDG------GPVPILRQRTALHAAPPPALSRRRVERPVPLG 146

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           IR +D    +  GQR+ V AG G+GKS LL M ARS   D V++ LVGERGREVREF+E 
Sbjct: 147 IRAVDACLTVGEGQRVAVMAGPGVGKSVLLGMLARSATADVVVVGLVGERGREVREFVER 206

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
            LG  L ++VVVVATSD SP+ R  A + A  +AE+F  +G  VLL++DS++R A + RE
Sbjct: 207 DLGPGLARAVVVVATSDASPLERLRAAMAATAVAEWFRGRGRRVLLLVDSLSRVAQAQRE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH-NDPIADS 327
           I   +GE P  RGYP S F+ LPRL+ER G ++   G+ITA  +VL +GD+H  DPIAD+
Sbjct: 267 IGLAAGEPPTTRGYPPSAFAILPRLVERAG-NDAGPGSITAFYTVLAEGDDHAGDPIADA 325

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            R+ LDGH+VL+R LAE G +P +D LASVSR+ +     + + L      ++    E  
Sbjct: 326 ARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPPEHRALAREAREVLSAHREAA 385

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           D+  +G Y  G +  +D+A+  +  +  FL+Q P++
Sbjct: 386 DLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAE 421


>gi|134294012|ref|YP_001117748.1| FliI/YscN family ATPase [Burkholderia vietnamiensis G4]
 gi|134137169|gb|ABO58283.1| ATPase, FliI/YscN family [Burkholderia vietnamiensis G4]
          Length = 465

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/382 (41%), Positives = 223/382 (58%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + +      GRV++ LG+P+D D 
Sbjct: 83  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFAVGDALFGRVLDGLGRPLD-DL 141

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 142 GPVTGAAWVSTQQDPPNPLARKLIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 201

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 202 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 261

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 262 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 321

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +  +G+ITA+ +VLV+GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 322 AG--QGARGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 379

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   ++  + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 380 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 439

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+    S EDV F  +  KL
Sbjct: 440 CAQA----SHEDVRFDALLAKL 457


>gi|241761173|ref|ZP_04759262.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|283856297|ref|YP_162372.2| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241374792|gb|EER64253.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|283775293|gb|AAV89261.2| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 443

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/325 (42%), Positives = 202/325 (62%), Gaps = 6/325 (1%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRVI ALG+P+D   +LG    D    ++ K+   +NR RV + F  G+R I+      
Sbjct: 105 LGRVIGALGEPLD---NLGPIITDEYWPLVGKMGNPLNRGRVTQPFDMGVRAINALLTAG 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218
            GQRI + AGSG+GKS L+         D ++  L+GER REV +F+E  + D+++ KSV
Sbjct: 162 VGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSV 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV   +D  P+LR  A + A  IAEYF +KG NVLL++DS+TR AH+ RE+  + GE P 
Sbjct: 222 VVAVPADHPPVLRLRAAMRATAIAEYFRAKGKNVLLLIDSLTRIAHAQREVGLSLGEPPT 281

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP S    +PRL+ER G     KG ITA+ +VL DGD+ +DPI D+ R+I+DGHI+L
Sbjct: 282 IKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADGDDPDDPIVDTARAIVDGHIIL 341

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE+G +P +D   S+SR+     S   ++  + L  L   +EE RD+ L+G YR G
Sbjct: 342 SRSLAEQGVFPAIDLGKSLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRSG 401

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSD 423
            D  +D+A+++   + DF++Q  ++
Sbjct: 402 TDASIDEAINRHNDVLDFIRQGQNE 426


>gi|259908761|ref|YP_002649117.1| flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|224964383|emb|CAX55892.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|283478737|emb|CAY74653.1| flagellum-specific ATP synthase [Erwinia pyrifoliae DSM 12163]
          Length = 453

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/328 (42%), Positives = 198/328 (60%), Gaps = 2/328 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+DG  +   G  +  I     P + R  + +   TG+R I+    +  G
Sbjct: 116 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITEVLDTGVRAINALLTVGRG 174

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++VV+
Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVI 234

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +
Sbjct: 235 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R
Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR+            V     L+  ++  RD+  +G Y  G D
Sbjct: 355 RLAESGHYPAIDIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
             LDKA+   P +  FL+Q   + S+ D
Sbjct: 415 PTLDKAIKLYPELEAFLQQGMFERSTFD 442


>gi|213421618|ref|ZP_03354684.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 319

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/320 (46%), Positives = 199/320 (62%), Gaps = 11/320 (3%)

Query: 103 GRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           GRVI+  G+P+DG    D   K   +M      PPAM RQ + +   TGIR ID      
Sbjct: 7   GRVIDGFGRPLDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCG 61

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SV 218
            GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +  +K  V
Sbjct: 62  EGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCV 121

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V
Sbjct: 122 IVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAV 181

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           +  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL
Sbjct: 182 SGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVL 239

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ G
Sbjct: 240 SRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRG 299

Query: 399 VDLILDKAVHQVPIIYDFLK 418
           VD   DKA+   P I  FL+
Sbjct: 300 VDTDTDKAIDTYPDICTFLR 319


>gi|260752865|ref|YP_003225758.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552228|gb|ACV75174.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 443

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/325 (42%), Positives = 202/325 (62%), Gaps = 6/325 (1%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRVI ALG+P+D   +LG    D    ++ K+   +NR RV + F  G+R I+      
Sbjct: 105 LGRVIGALGEPLD---NLGPIITDEYWPLVGKMGNPLNRGRVTQPFDMGVRAINALLTAG 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218
            GQRI + AGSG+GKS L+         D ++  L+GER REV +F+E  + D+++ KSV
Sbjct: 162 VGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSV 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV   +D  P+LR  A + A  IAEYF +KG NVLL++DS+TR AH+ RE+  + GE P 
Sbjct: 222 VVAVPADHPPVLRLRAAMRATAIAEYFRAKGKNVLLLIDSLTRIAHAQREVGLSLGEPPT 281

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP S    +PRL+ER G     KG ITA+ +VL DGD+ +DPI D+ R+I+DGHI+L
Sbjct: 282 IKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADGDDPDDPIVDTARAIVDGHIIL 341

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE+G +P +D   S+SR+     S   ++  + L  L   +EE RD+ L+G YR G
Sbjct: 342 SRSLAEQGVFPAIDLGKSLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRSG 401

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSD 423
            D  +D+A+++   + DF++Q  ++
Sbjct: 402 TDASIDEAINRHNDVLDFIRQGQNE 426


>gi|292489159|ref|YP_003532046.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
 gi|292900277|ref|YP_003539646.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291200125|emb|CBJ47251.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291554593|emb|CBA22232.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
          Length = 454

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/319 (42%), Positives = 200/319 (62%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G+P+DG  +  K   +      + P ++R  ++     G+R I+    +  GQ
Sbjct: 115 GRVLDAQGRPLDGRPAPLKTSSASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + ++++VV+ 
Sbjct: 174 RMGLFAGSGVGKSVLLGMMARYTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR    + A  +AE F  +G NVLLI+DS+TRFA + RE+A   GE P  +G
Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR   +     + + V S    +  ++   D+  +G Y  G D 
Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRNVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413

Query: 402 ILDKAVHQVPIIYDFLKQS 420
           +LD+A+ + P +  +L Q+
Sbjct: 414 LLDRAIARYPQMESYLHQA 432


>gi|28899020|ref|NP_798625.1| flagellum-specific ATP synthase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837002|ref|ZP_01989669.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ3810]
 gi|260365234|ref|ZP_05777791.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|260878784|ref|ZP_05891139.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|260897379|ref|ZP_05905875.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|260899938|ref|ZP_05908333.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|4322012|gb|AAD15915.1| polar flagellum-specific ATP synthase FliI [Vibrio
           parahaemolyticus]
 gi|28807239|dbj|BAC60509.1| polar flagellum-specific ATP synthase FliI [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149749775|gb|EDM60520.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ3810]
 gi|308088286|gb|EFO37981.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|308094233|gb|EFO43928.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|308107351|gb|EFO44891.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|308115396|gb|EFO52936.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|328474443|gb|EGF45248.1| flagellum-specific ATP synthase [Vibrio parahaemolyticus 10329]
          Length = 439

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A    P + ++L+Q
Sbjct: 401 AIDGAFTLKPKLDEYLQQ 418


>gi|284007028|emb|CBA72303.1| type III secretion cytoplasmic ATP synthase
           (YscN,SpaL,MxiB,HrcN,EscN) [Arsenophonus nasoniae]
          Length = 457

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 204/325 (62%), Gaps = 6/325 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G +++ LG+P++     G+   +    +  P  + RQ + +   TGI+ ID    L  GQ
Sbjct: 126 GGIVDGLGRPLEKMPIAGEWRSNH---NAAPDPLTRQLISEVLPTGIKAIDGILTLGVGQ 182

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           RIG+FA +G GKSTLL M AR    D V+++LVGERGREVREF++++L     KK+++VV
Sbjct: 183 RIGIFAAAGGGKSTLLGMLARGCEADVVVLALVGERGREVREFLDNHLPATARKKTILVV 242

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD  P+ R  A LTA TIAEYF  +G  VLL++DS+TRFA + REI   +GE PVA G
Sbjct: 243 ATSDRPPLERMKASLTATTIAEYFRDQGKQVLLLVDSLTRFARAAREIGLAAGEPPVANG 302

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF  +  LLER GP+  + G+I+A+ +VLV+GDN N+P+AD VRSILDGHIVL+R 
Sbjct: 303 FPPSVFVHMAALLERAGPA--KVGSISAIYTVLVEGDNMNEPVADEVRSILDGHIVLSRQ 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA  G +P +D  ASVSR+ D   S         L  L   F++ + +  +G Y+ G D 
Sbjct: 361 LAAAGHFPAIDVNASVSRVMDNIVSKTHSLHARRLRQLRALFQDVQLLIRVGEYQSGQDK 420

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
             D+A+ +   I  FL+Q   +  S
Sbjct: 421 DTDEAIEKNHPINQFLRQDSDEWVS 445


>gi|258621107|ref|ZP_05716141.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
 gi|262166233|ref|ZP_06033970.1| flagellum-specific ATP synthase FliI [Vibrio mimicus VM223]
 gi|262170883|ref|ZP_06038561.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
 gi|258586495|gb|EEW11210.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
 gi|261891959|gb|EEY37945.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
 gi|262025949|gb|EEY44617.1| flagellum-specific ATP synthase FliI [Vibrio mimicus VM223]
          Length = 439

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 205/320 (64%), Gaps = 4/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +    + + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAAPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQS 420
             +D A    P +  +L+Q+
Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419


>gi|237705900|ref|ZP_04536381.1| flagellum-specific ATP synthase [Escherichia sp. 3_2_53FAA]
 gi|226900657|gb|EEH86916.1| flagellum-specific ATP synthase [Escherichia sp. 3_2_53FAA]
          Length = 471

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 129 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 187

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 188 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 247

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 248 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 307

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 308 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 367

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 368 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 427

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 428 SDPMLDKAIALWPQLESYLQQ 448


>gi|293415251|ref|ZP_06657894.1| flagellar protein export ATPase FliI [Escherichia coli B185]
 gi|291432899|gb|EFF05878.1| flagellar protein export ATPase FliI [Escherichia coli B185]
          Length = 471

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 129 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINTLLTVG 187

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 188 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 247

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 248 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 307

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 308 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 367

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 368 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 427

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 428 SDPMLDKAIALWPQLEGYLQQ 448


>gi|153803032|ref|ZP_01957618.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-3]
 gi|153825622|ref|ZP_01978289.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-2]
 gi|124121430|gb|EAY40173.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-3]
 gi|149740773|gb|EDM54872.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-2]
 gi|327484659|gb|AEA79066.1| Flagellum-specific ATP synthase FliI [Vibrio cholerae LMA3894-4]
          Length = 439

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 205/321 (63%), Gaps = 6/321 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI+ +G P+DG   +      S+  M   P  + R+ + +    GI+ I+    +  G
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV
Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +
Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399
            +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG 
Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D  +D A    P +  +L+Q+
Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419


>gi|296103636|ref|YP_003613782.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058095|gb|ADF62833.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 454

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/375 (40%), Positives = 224/375 (59%), Gaps = 10/375 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF------HWGRFRISPSACWCGRVINALGKPID 114
           +V+  N   +++ P+   + I  G  ++      H G+ ++       GRV++A G+P+D
Sbjct: 68  EVVGFNGQTLFLMPLEHVDGILPGARIYALQSDSHAGK-QLPVGPHLLGRVLDAQGRPLD 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  + GK    +   +  P  ++R  ++     G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 127 GRPAPGKPAAGLFTPTLNP--LHRDPIKNVLDVGVRAINGLLTVGRGQRMGLFAGSGVGK 184

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           S LL M AR    D +++ L+GERGREV++FIE+ LG+  L ++VVV A +D SPILR  
Sbjct: 185 SVLLGMMARFTTADVIVVGLIGERGREVKDFIENILGEQGLARAVVVAAPADVSPILRMQ 244

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
             + A  IAE F  +G NVLLI+DS+TR+A + RE+A   GE P  +GYP SVF+ LP L
Sbjct: 245 GAVYATRIAEDFRERGLNVLLIMDSLTRYAMAQREVALAIGEPPATKGYPPSVFARLPAL 304

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G   K  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D 
Sbjct: 305 VERTGNGVKGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDI 364

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR   +     + + V     L+  ++  RD+  +G Y  G D +LD+A+ + P +
Sbjct: 365 EASISRAMTELIPHAQYRKVQRFKQLLSAYQRNRDLVSVGAYVKGSDAMLDQAIDKYPSL 424

Query: 414 YDFLKQSPSDLSSED 428
             FL Q+  + S  D
Sbjct: 425 EAFLHQAIHERSGYD 439


>gi|229513781|ref|ZP_04403243.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TMA 21]
 gi|229348962|gb|EEO13919.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TMA 21]
          Length = 439

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 205/321 (63%), Gaps = 6/321 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI+ +G P+DG   +      S+  M   P  + R+ + +    GI+ I+    +  G
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV
Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +
Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399
            +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG 
Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D  +D A    P +  +L+Q+
Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419


>gi|227112538|ref|ZP_03826194.1| flagellum-specific ATP synthase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227328355|ref|ZP_03832379.1| flagellum-specific ATP synthase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 456

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 192/318 (60%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I     P + R  +E     G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPDTGYRAPLITPPFNP-LQRTPIESVLDVGVRAINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR             V     L+  ++  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LDKA+   P +  FL+Q
Sbjct: 416 MLDKAIRLYPHLEAFLQQ 433


>gi|294084398|ref|YP_003551156.1| ATPase [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663971|gb|ADE39072.1| ATPase, FliI/YscN family [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 442

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 195/318 (61%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV +ALG P+D +  L   +    +M K    + R+ V+K    G+R+I+    +  GQ
Sbjct: 104 GRVTDALGVPLD-NRPLPPLEGQWPLMGKELNPLQRKPVDKPLDVGVRIINSVLSVGQGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           R+G+ AGSG+GKS LL M +R    D V++ ++GERGREV  F+   LG   +    VVA
Sbjct: 163 RVGIIAGSGVGKSVLLGMMSRFTDADIVVVGMIGERGREVGSFVNYILGSESRDRAAVVA 222

Query: 223 T-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +D SP+LR      A  IAEYF  KG NVLLI+DS+TR AH+ REI    GE P ++G
Sbjct: 223 VPADRSPLLRIRGAERATAIAEYFRDKGKNVLLIMDSLTRVAHARREIGLALGEQPTSKG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SV S +PRL+ER G   + +G+ITA+ +VL DGD+ NDP+ D+ R+ILDGHI+L+R 
Sbjct: 283 YPPSVVSMIPRLIERSGTGVEGQGSITAIYTVLADGDDANDPVVDTARAILDGHILLSRQ 342

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            A+ G YP +D   SVSR+ +    AD++   +    L+  + E RD+ L+GGY PG D 
Sbjct: 343 QAQMGIYPAIDVTTSVSRVMNDITDADQQASAARFRRLVSLYMENRDLILMGGYTPGQDP 402

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            LD AV   P +   ++Q
Sbjct: 403 DLDLAVELWPTLTKHIQQ 420


>gi|156933439|ref|YP_001437355.1| flagellum-specific ATP synthase [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156531693|gb|ABU76519.1| hypothetical protein ESA_01257 [Cronobacter sakazakii ATCC BAA-894]
          Length = 456

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/336 (43%), Positives = 202/336 (60%), Gaps = 7/336 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV++  GKP+DG   L   D         PP   + R  +E     G+R I+    + 
Sbjct: 117 LGRVLDGAGKPLDG---LPSPDTETTGALITPPFNPLQRTAIEDVLDVGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR+     S +    V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRVMTAIISEEHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
            D +LD+A+   P +  FL+Q   + S  ED  Q +
Sbjct: 414 SDPMLDRAITLWPQLEAFLQQGIYERSGVEDALQAL 449


>gi|27365283|ref|NP_760811.1| flagellum-specific ATP synthase [Vibrio vulnificus CMCP6]
 gi|320155667|ref|YP_004188046.1| flagellum-specific ATP synthase FliI [Vibrio vulnificus MO6-24/O]
 gi|27361430|gb|AAO10338.1| flagellar protein export ATPase FliI [Vibrio vulnificus CMCP6]
 gi|319930979|gb|ADV85843.1| flagellum-specific ATP synthase FliI [Vibrio vulnificus MO6-24/O]
          Length = 441

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 103 GRVIDGVGNPLDGLGPIYTEHRASFNAEPINP-LARKPITEPLDVGLKAINGLLTVGKGQ 161

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  K+SVVV 
Sbjct: 162 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 221

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 222 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 281

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    ++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 282 YPPSVFAKLPALVERAGNGGPQQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 342 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 401

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A    P + ++L+Q
Sbjct: 402 AIDSAFTLKPKLDEYLQQ 419


>gi|297582028|ref|ZP_06943947.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC385]
 gi|297533723|gb|EFH72565.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC385]
          Length = 439

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 205/321 (63%), Gaps = 6/321 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI+ +G P+DG   +      S+  M   P  + R+ + +    GI+ I+    +  G
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV
Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +
Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399
            +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG 
Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D  +D A    P +  +L+Q+
Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419


>gi|163801848|ref|ZP_02195745.1| flagellum-specific ATP synthase [Vibrio sp. AND4]
 gi|159174356|gb|EDP59160.1| flagellum-specific ATP synthase [Vibrio sp. AND4]
          Length = 439

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTEHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+T+AEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGGEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A    P + ++L+Q
Sbjct: 401 AIDSAFTLKPKLDEYLQQ 418


>gi|91211159|ref|YP_541145.1| flagellum-specific ATP synthase [Escherichia coli UTI89]
 gi|117624081|ref|YP_852994.1| flagellum-specific ATP synthase [Escherichia coli APEC O1]
 gi|218558798|ref|YP_002391711.1| flagellum-specific ATP synthase [Escherichia coli S88]
 gi|91072733|gb|ABE07614.1| flagellum-specific ATP synthase [Escherichia coli UTI89]
 gi|115513205|gb|ABJ01280.1| flagellum-specific ATP synthase [Escherichia coli APEC O1]
 gi|218365567|emb|CAR03294.1| flagellum-specific ATP synthase [Escherichia coli S88]
 gi|294493096|gb|ADE91852.1| flagellar protein export ATPase FliI [Escherichia coli IHE3034]
 gi|307626583|gb|ADN70887.1| flagellum-specific ATP synthase [Escherichia coli UM146]
 gi|315286663|gb|EFU46096.1| flagellar protein export ATPase FliI [Escherichia coli MS 110-3]
 gi|323186817|gb|EFZ72137.1| flagellar protein export ATPase FliI [Escherichia coli RN587/1]
 gi|323952434|gb|EGB48307.1| ATPase FliI/YscN family protein [Escherichia coli H252]
 gi|323956337|gb|EGB52080.1| ATPase FliI/YscN family protein [Escherichia coli H263]
          Length = 457

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLESYLQQ 434


>gi|212709509|ref|ZP_03317637.1| hypothetical protein PROVALCAL_00551 [Providencia alcalifaciens DSM
           30120]
 gi|212687847|gb|EEB47375.1| hypothetical protein PROVALCAL_00551 [Providencia alcalifaciens DSM
           30120]
          Length = 454

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/318 (44%), Positives = 199/318 (62%), Gaps = 3/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G P+DG   L     +  I   + P + R  +      G+R I+    +  GQ
Sbjct: 117 GRVLDAQGTPLDGKGPLETKQRAPLITPSINP-LERTPIHDILDVGVRAINSLLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D L+++VVV 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGADGLRRAVVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAEYF  +G +VLLI+DS+TR++ + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGASYATRIAEYFRDQGKSVLLIMDSLTRYSMAQREIALAVGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G + K  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RS
Sbjct: 296 YPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 354

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR   +    D  + +     L   ++  RD+  +G Y  G D 
Sbjct: 355 LAESGHYPAIDIEASISRAMTELIEKDHYRKIQRFKQLTSSYQRNRDLINVGAYAMGSDP 414

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD A+   P +  FL+Q
Sbjct: 415 MLDTAIQYYPRMSKFLQQ 432


>gi|330876197|gb|EGH10346.1| type III secretion component [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 442

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/425 (38%), Positives = 230/425 (54%), Gaps = 14/425 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQ 61
           +LE   QLA+          G + SI  V    +     V +G+  + +  G   +   +
Sbjct: 11  DLERRLQLAQPRPMR-----GTLRSIRGVLLRASVAG--VRIGELCLLRDPGNGRELSAE 63

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI  + D   + P+G  E +S    +   G+   +       GRVI+ +G+ +DG   + 
Sbjct: 64  VIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPIA 123

Query: 121 KGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              L    +   PPA  +RQR+ K    G+R ID    L  GQR+G+F   G+GKS+LL+
Sbjct: 124 ALGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEPGVGKSSLLA 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
              R+   D ++I L+GERGREVRE +E  L    + ++V VVATSD     R  A   A
Sbjct: 184 SIVRNSDADVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            T+AEY   +G NVLL++DS+TRFA + REI    GE P  RGYP S FS LPRLLER G
Sbjct: 244 TTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P     G+ITA+ +VL +GD   DP+A+  RSILDGHIVL+  LA+   +P +D L S S
Sbjct: 304 PGPS--GSITALYTVLTEGDATTDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL D   + + K+L S L  LI R +E   +  +G Y  G D + D+A+ +   I  FL+
Sbjct: 362 RLMDHVATPEHKRLASRLRDLIARRQEIELLIQVGEYAAGSDPLADEAIIRHSAIEAFLR 421

Query: 419 QSPSD 423
           Q  ++
Sbjct: 422 QPAAE 426


>gi|25008474|sp|Q8KA42|FLII_BUCAP RecName: Full=Flagellum-specific ATP synthase
 gi|21622966|gb|AAM67640.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 466

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 208/335 (62%), Gaps = 4/335 (1%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I  S    GRV+++ G+P+DG   L     +  + S V   +NR+ + +   TGIR I+
Sbjct: 121 KIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTF-LKSNVVNPLNRKPITEVLDTGIRAIN 179

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
               +  GQRIG+F+ SG+GKS LL M A+    D VII L+GERGREV++FIE+ LG N
Sbjct: 180 ALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSN 239

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVV+ A +D SP+L+  A   A +IAEYF  K  +VLLI+DS+TR+A + R ++ +
Sbjct: 240 GLSRSVVIAAPADVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLS 299

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSI 331
            GELPV++GYP+SVFS++P L+ER G ++   G+IT+  +VL +  ++  DPIA   RSI
Sbjct: 300 LGELPVSKGYPSSVFSKIPILVERTGNTD-NYGSITSFYTVLTESEEDPQDPIAHICRSI 358

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIVL+R  AE G YP +D   S+SR+     S  +         LI  ++  RD+  
Sbjct: 359 LDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLIN 418

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           IG Y  G D  LD A+   PI+  FL+Q  S+ SS
Sbjct: 419 IGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSS 453


>gi|300940396|ref|ZP_07154981.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
 gi|300454790|gb|EFK18283.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
          Length = 457

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLESYLQQ 434


>gi|89899364|ref|YP_521835.1| ATPase FliI/YscN [Rhodoferax ferrireducens T118]
 gi|89344101|gb|ABD68304.1| ATPase FliI/YscN [Rhodoferax ferrireducens T118]
          Length = 471

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/342 (42%), Positives = 204/342 (59%), Gaps = 4/342 (1%)

Query: 90  WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTG 148
           +   R+       GRV++A G P+D    +   D++   + + P  AM+R  V +   TG
Sbjct: 116 YATLRLPLGDGLLGRVVDAQGAPMDRRGPIE--DVTAVPLDRQPINAMDRAPVRETLDTG 173

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           +R I+    +  GQRIG+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIED
Sbjct: 174 VRAINALLTIGRGQRIGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIED 233

Query: 209 YLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
            LGD+ + +SVVV A  D  P+LR      A  IAE F  KG +VLL++DS+TR+A + R
Sbjct: 234 ILGDDGRARSVVVAAPGDAPPLLRMQGAAYATAIAESFRDKGKHVLLLMDSLTRYAMAQR 293

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EIA   GE P  +GYP S F++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+
Sbjct: 294 EIALAIGEPPATKGYPPSCFAKLPQLVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADA 353

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            R+ILDGHIVL+R+LAE G +P +D   S SR+          ++      +  R+E+ R
Sbjct: 354 ARAILDGHIVLSRALAESGHFPAIDIEQSASRVMHNVVPQQHFEMARRFRAINSRYEKGR 413

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           D+  IG Y  G D  LD+A+     +  FL+Q   + S+ D 
Sbjct: 414 DLVQIGAYVGGSDPALDEAIQLHDDMARFLQQDMLEASTLDA 455


>gi|30410813|ref|NP_660429.2| flagellum-specific ATP synthase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 455

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 208/335 (62%), Gaps = 4/335 (1%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I  S    GRV+++ G+P+DG   L     +  + S V   +NR+ + +   TGIR I+
Sbjct: 110 KIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTF-LKSNVVNPLNRKPITEVLDTGIRAIN 168

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
               +  GQRIG+F+ SG+GKS LL M A+    D VII L+GERGREV++FIE+ LG N
Sbjct: 169 ALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSN 228

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +SVV+ A +D SP+L+  A   A +IAEYF  K  +VLLI+DS+TR+A + R ++ +
Sbjct: 229 GLSRSVVIAAPADVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLS 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSI 331
            GELPV++GYP+SVFS++P L+ER G ++   G+IT+  +VL +  ++  DPIA   RSI
Sbjct: 289 LGELPVSKGYPSSVFSKIPILVERTGNTD-NYGSITSFYTVLTESEEDPQDPIAHICRSI 347

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIVL+R  AE G YP +D   S+SR+     S  +         LI  ++  RD+  
Sbjct: 348 LDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLIN 407

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           IG Y  G D  LD A+   PI+  FL+Q  S+ SS
Sbjct: 408 IGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSS 442


>gi|86146133|ref|ZP_01064459.1| flagellum-specific ATP synthase [Vibrio sp. MED222]
 gi|218708826|ref|YP_002416447.1| flagellum-specific ATP synthase [Vibrio splendidus LGP32]
 gi|85836080|gb|EAQ54212.1| flagellum-specific ATP synthase [Vibrio sp. MED222]
 gi|218321845|emb|CAV17818.1| Flagellum-specific ATP synthase [Vibrio splendidus LGP32]
          Length = 439

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 134/318 (42%), Positives = 201/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  K+SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+ +AEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALAVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A    P + ++L+Q
Sbjct: 401 AIDSAFTLKPRLDEYLQQ 418


>gi|300717234|ref|YP_003742037.1| flagellum-specific ATP synthase [Erwinia billingiae Eb661]
 gi|299063070|emb|CAX60190.1| Flagellum-specific ATP synthase [Erwinia billingiae Eb661]
          Length = 452

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/390 (39%), Positives = 221/390 (56%), Gaps = 18/390 (4%)

Query: 54  KNSDNLG------QVIRINLDIVYICPVGIGEEISLGDLVF-------HWGR-FRISPSA 99
           + +DN G      +V+  N   +++ P+   E I  G  V+       H G+   + P  
Sbjct: 55  ERADNNGVAEVEAEVVGFNGQRLFLMPLEEVEGILPGARVYARLSGDKHSGKQLMLGPE- 113

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG  +   G  +  I     P + R  +     TG+R I+    + 
Sbjct: 114 -LLGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITDVLDTGVRAINALLTVG 171

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++V
Sbjct: 172 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGTEGRARAV 231

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 232 VIAAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 291

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 292 TKGYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 351

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR+            V     L+  ++  RD+  +G Y  G
Sbjct: 352 SRRLAESGHYPAIDIEASISRVMAHLIDEPHYARVRQFKQLLSSYQRNRDLVSVGAYAAG 411

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            D  LDKA+   P +  FL+Q   + S+ D
Sbjct: 412 SDPTLDKAIKLYPELETFLQQGMFERSTFD 441


>gi|15606716|ref|NP_214096.1| flagellar export protein [Aquifex aeolicus VF5]
 gi|3913671|sp|O67531|FLII_AQUAE RecName: Full=Flagellum-specific ATP synthase
 gi|2983946|gb|AAC07494.1| flagellar export protein [Aquifex aeolicus VF5]
          Length = 443

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 253/428 (59%), Gaps = 12/428 (2%)

Query: 1   MQKNLET--LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +++NL+   L + +E Y + L V G  +S+   +Y  +  +  +  +G+ V  Q  +   
Sbjct: 4   IRRNLQKSYLKRCSEMYLRGLKVSGEIVSA-KGIY--LEAILPFANIGNEVEIQSNSRRI 60

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDD 117
            G+VI  + D V + P      +  GD V        + +     G+V++  G P+DG  
Sbjct: 61  RGEVIGFSGDKVLVMPYEPVFGLRKGDKVLLKNELVSTKTGNGVVGKVVDPFGNPLDGGF 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                +  +E+    P  + R+R+ + F TG+R ++    L  GQ+IG+FAG+G+GKSTL
Sbjct: 121 IGFVEEKGLELPQINP--LYRERIREVFDTGVRSVNALFTLGKGQKIGIFAGAGVGKSTL 178

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V+++L+GERGREV+EF+E+ LG + LKKSVVVV+T+D+SPIL+    +
Sbjct: 179 LGMITRHSKADVVVLALIGERGREVKEFLEEVLGEEGLKKSVVVVSTADQSPILKVKGAI 238

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +AV  A +F+S+G +VLL++DSITR A + REI   +GE P  +G+  SVF  L R+ E 
Sbjct: 239 SAVVHAHHFASQGKDVLLLMDSITRLALAQREIGLAAGEPPTLKGFTPSVFQLLTRIAES 298

Query: 297 IGPSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
            G    +KG+IT + +VLV+GD+ + DPIADS+  +LDGHI+L+R  A  G +P VDP+ 
Sbjct: 299 CGAF--KKGSITGIFTVLVEGDDISLDPIADSLMGVLDGHIILSRKRAVRGLFPAVDPVR 356

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SRL  K  S +     +    ++ +FE+  ++  IG Y+ G + ++DK ++ +  +  
Sbjct: 357 SLSRLMPKLVSEEHFMKANFFKEVLSKFEDVEELVRIGLYKGGSNPLVDKVINNLEKVES 416

Query: 416 FLKQSPSD 423
           F KQ P +
Sbjct: 417 FFKQKPEE 424


>gi|311279117|ref|YP_003941348.1| ATPase, FliI/YscN family [Enterobacter cloacae SCF1]
 gi|308748312|gb|ADO48064.1| ATPase, FliI/YscN family [Enterobacter cloacae SCF1]
          Length = 456

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  +    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTTETGALITPPFNP-LQRTAIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGADGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      +      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434


>gi|218699498|ref|YP_002407127.1| flagellum-specific ATP synthase [Escherichia coli IAI39]
 gi|218369484|emb|CAR17249.1| flagellum-specific ATP synthase [Escherichia coli IAI39]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A ++REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMALREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLESYLQQ 434


>gi|291283118|ref|YP_003499936.1| Flagellum-specific ATP synthase [Escherichia coli O55:H7 str.
           CB9615]
 gi|290762991|gb|ADD56952.1| Flagellum-specific ATP synthase [Escherichia coli O55:H7 str.
           CB9615]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|254439304|ref|ZP_05052798.1| ATPase FliI/YscN family [Octadecabacter antarcticus 307]
 gi|198254750|gb|EDY79064.1| ATPase FliI/YscN family [Octadecabacter antarcticus 307]
          Length = 444

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 195/326 (59%), Gaps = 3/326 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            + GRV++ LG P+D D  + +G     +  K+   + R  +      G+R ++    + 
Sbjct: 103 AYLGRVVDGLGLPLD-DSPIPEGAAKTPLNGKLLNPLARGIIPGPLDVGVRAVNGLLTIG 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
           +GQRIG+ AGSG+GKS LL M AR    D V+I L+GER REV E +   +G      V 
Sbjct: 162 YGQRIGIIAGSGVGKSVLLGMMARYASADVVVIGLIGERAREVGEMVRAIMGSEPHGKVS 221

Query: 220 VVAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +VA  +D SP+LR      A  +AE+F  +G NVLLI+DS+TR AH+ REI    GE P 
Sbjct: 222 IVAVPADRSPLLRIRGARRATALAEHFRDQGKNVLLIMDSLTRIAHAQREIGLALGEAPT 281

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
           ++GYP SV S +P L+ER G       G+IT + +VL DGD+ NDP+ D+ R+ILDGHIV
Sbjct: 282 SKGYPASVISMIPALIERAGMGVGPNFGSITGIYTVLADGDDSNDPVVDTARAILDGHIV 341

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+RS+A+ G YP +D  AS+SR+ +    + ++K        +  + E RD+ L+GGY  
Sbjct: 342 LSRSIAQMGIYPAIDIPASISRVMNDIVPSQQQKAARKFKRFVSLYNENRDLMLMGGYVA 401

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423
           G DL LD+AV   P + D++ QSP +
Sbjct: 402 GQDLDLDQAVSVWPKLVDYINQSPEE 427


>gi|91223547|ref|ZP_01258812.1| flagellum-specific ATP synthase [Vibrio alginolyticus 12G01]
 gi|91191633|gb|EAS77897.1| flagellum-specific ATP synthase [Vibrio alginolyticus 12G01]
          Length = 439

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 136/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+ G D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKSGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D A    P + ++L+QS
Sbjct: 401 AIDGAFTLKPKLDEYLQQS 419


>gi|284921849|emb|CBG34924.1| flagellum-specific ATP synthase [Escherichia coli 042]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|330880573|gb|EGH14722.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 607

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 200/328 (60%), Gaps = 7/328 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           V++ PVG    I+ G  V      GR  +  S    GRV++  G+P+DG   +   D   
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSML--GRVLDGAGRPLDGRSPIKAEDWVP 134

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 135 MDGPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFIE  LG+  LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 194 ADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G
Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     
Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIG 393
           S +          L  R+++TRD+  +G
Sbjct: 374 SPEHMARAQHFKQLWSRYQQTRDLISVG 401


>gi|296135694|ref|YP_003642936.1| flagellar protein export ATPase FliI [Thiomonas intermedia K12]
 gi|295795816|gb|ADG30606.1| flagellar protein export ATPase FliI [Thiomonas intermedia K12]
          Length = 448

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 147/361 (40%), Positives = 221/361 (61%), Gaps = 3/361 (0%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  N D V +  +G  + ++ G  V    G  RI       GRV++  G+P+DGD +L
Sbjct: 65  EVVGFNGDHVQLMALGEVQGLTPGARVHPVPGDIRIPVGPELLGRVLDGNGRPLDGDGAL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +     ++ P + R  V +    G+R I+    +  G R+G+FAGSG+GKS LL 
Sbjct: 125 LASHYTTLSTQQINP-LGRALVRQPLDVGVRAINALFTVGRGARMGLFAGSGVGKSVLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D +++ L+GERGREV+EFIED LG +   ++VVV A +D   + R      A
Sbjct: 184 MMARNTNADVIVVGLIGERGREVKEFIEDILGVEGRSRAVVVAAPADAPALTRIRGARLA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEY+  +G NVLL++DS+TR+A ++RE+A  +GE P ARG+P SVF++LP L+ER G
Sbjct: 244 TAMAEYYRDQGLNVLLLMDSVTRYALALREVALAAGEPPAARGFPPSVFAKLPALVERAG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              +  G+ITA  +VL++GD+  DP+AD+VR+ILDGHIVL+R LAE+G +P +D  AS+S
Sbjct: 304 NGPEGGGSITAFYTVLMEGDDQQDPVADNVRAILDGHIVLSRRLAEQGHFPAIDLQASIS 363

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +  E + +  L  +  R+   +D+  +G Y PG DL LD+AV     I +FL 
Sbjct: 364 RVMPAIATPLELRRMQKLKEMQSRYASQQDLIAVGAYTPGADLQLDQAVLAHVGIREFLI 423

Query: 419 Q 419
           Q
Sbjct: 424 Q 424


>gi|12516045|gb|AAG56956.1|AE005416_10 flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 496

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/318 (44%), Positives = 195/318 (61%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    +  GQ
Sbjct: 157 GRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVGRGQ 215

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 216 RMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 275

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 276 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 335

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 336 YPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 395

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G D 
Sbjct: 396 LAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDP 455

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LDKA+   P +  +L+Q
Sbjct: 456 MLDKAIALWPQLEGYLQQ 473


>gi|301327728|ref|ZP_07220933.1| flagellar protein export ATPase FliI [Escherichia coli MS 78-1]
 gi|300845728|gb|EFK73488.1| flagellar protein export ATPase FliI [Escherichia coli MS 78-1]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|260868534|ref|YP_003234936.1| flagellum-specific ATP synthase FliI [Escherichia coli O111:H- str.
           11128]
 gi|257764890|dbj|BAI36385.1| flagellum-specific ATP synthase FliI [Escherichia coli O111:H- str.
           11128]
 gi|323180806|gb|EFZ66346.1| flagellar protein export ATPase FliI [Escherichia coli 1180]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|323968357|gb|EGB63764.1| ATPase FliI/YscN family protein [Escherichia coli M863]
 gi|327253073|gb|EGE64727.1| flagellar protein export ATPase FliI [Escherichia coli STEC_7v]
          Length = 456

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|323977878|gb|EGB72964.1| ATPase FliI/YscN family protein [Escherichia coli TW10509]
          Length = 456

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|301018209|ref|ZP_07182724.1| flagellar protein export ATPase FliI [Escherichia coli MS 69-1]
 gi|300399796|gb|EFJ83334.1| flagellar protein export ATPase FliI [Escherichia coli MS 69-1]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|209919363|ref|YP_002293447.1| flagellum-specific ATP synthase [Escherichia coli SE11]
 gi|209912622|dbj|BAG77696.1| flagellum-specific ATP synthase [Escherichia coli SE11]
 gi|324118990|gb|EGC12879.1| ATPase FliI/YscN family protein [Escherichia coli E1167]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|300923896|ref|ZP_07139911.1| flagellar protein export ATPase FliI [Escherichia coli MS 182-1]
 gi|300419859|gb|EFK03170.1| flagellar protein export ATPase FliI [Escherichia coli MS 182-1]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|157158932|ref|YP_001463243.1| flagellum-specific ATP synthase [Escherichia coli E24377A]
 gi|191168300|ref|ZP_03030093.1| flagellar protein export ATPase FliI [Escherichia coli B7A]
 gi|218689936|ref|YP_002398148.1| flagellum-specific ATP synthase [Escherichia coli ED1a]
 gi|256017866|ref|ZP_05431731.1| flagellum-specific ATP synthase [Shigella sp. D9]
 gi|300920160|ref|ZP_07136610.1| flagellar protein export ATPase FliI [Escherichia coli MS 115-1]
 gi|309795952|ref|ZP_07690365.1| flagellar protein export ATPase FliI [Escherichia coli MS 145-7]
 gi|332278892|ref|ZP_08391305.1| flagellum-specific ATP synthase [Shigella sp. D9]
 gi|157080962|gb|ABV20670.1| flagellar protein export ATPase FliI [Escherichia coli E24377A]
 gi|190901672|gb|EDV61428.1| flagellar protein export ATPase FliI [Escherichia coli B7A]
 gi|218427500|emb|CAR08395.2| flagellum-specific ATP synthase [Escherichia coli ED1a]
 gi|300412817|gb|EFJ96127.1| flagellar protein export ATPase FliI [Escherichia coli MS 115-1]
 gi|308120402|gb|EFO57664.1| flagellar protein export ATPase FliI [Escherichia coli MS 145-7]
 gi|323183925|gb|EFZ69312.1| flagellar protein export ATPase FliI [Escherichia coli 1357]
 gi|332101244|gb|EGJ04590.1| flagellum-specific ATP synthase [Shigella sp. D9]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|37680662|ref|NP_935271.1| flagellum-specific ATP synthase [Vibrio vulnificus YJ016]
 gi|37199411|dbj|BAC95242.1| polar flagellum-specific ATP synthase FliI [Vibrio vulnificus
           YJ016]
          Length = 441

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 103 GRVIDGVGNPLDGLGPIYTEHRASFNAEPINP-LARKPITEPLDVGLKAINGLLTVGKGQ 161

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  K+SVVV 
Sbjct: 162 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 221

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 222 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 281

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    ++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 282 YPPSVFAKLPALVERAGNGGPQQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 341

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 342 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 401

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A    P + ++L+Q
Sbjct: 402 SIDSAFTLKPKLDEYLQQ 419


>gi|331653353|ref|ZP_08354358.1| flagellar protein export ATPase FliI [Escherichia coli M718]
 gi|331049451|gb|EGI21523.1| flagellar protein export ATPase FliI [Escherichia coli M718]
          Length = 457

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|170769431|ref|ZP_02903884.1| flagellar protein export ATPase FliI [Escherichia albertii TW07627]
 gi|170121755|gb|EDS90686.1| flagellar protein export ATPase FliI [Escherichia albertii TW07627]
          Length = 456

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTAETGALITPPFNP-LQRTPIEHVLDTGVRPINTLLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVNVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIVLWPQLEGYLQQ 434


>gi|16129888|ref|NP_416451.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|74312481|ref|YP_310900.1| flagellum-specific ATP synthase [Shigella sonnei Ss046]
 gi|89108773|ref|AP_002553.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           W3110]
 gi|157161412|ref|YP_001458730.1| flagellum-specific ATP synthase [Escherichia coli HS]
 gi|161367587|ref|NP_288402.2| flagellum-specific ATP synthase [Escherichia coli O157:H7 EDL933]
 gi|168751870|ref|ZP_02776892.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758255|ref|ZP_02783262.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764433|ref|ZP_02789440.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771548|ref|ZP_02796555.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777368|ref|ZP_02802375.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783338|ref|ZP_02808345.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4076]
 gi|168790299|ref|ZP_02815306.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC869]
 gi|168802288|ref|ZP_02827295.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC508]
 gi|170019726|ref|YP_001724680.1| flagellum-specific ATP synthase [Escherichia coli ATCC 8739]
 gi|170081585|ref|YP_001730905.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188493364|ref|ZP_03000634.1| flagellar protein export ATPase FliI [Escherichia coli 53638]
 gi|193066385|ref|ZP_03047433.1| flagellar protein export ATPase FliI [Escherichia coli E22]
 gi|193071153|ref|ZP_03052077.1| flagellar protein export ATPase FliI [Escherichia coli E110019]
 gi|194429929|ref|ZP_03062439.1| flagellar protein export ATPase FliI [Escherichia coli B171]
 gi|194439572|ref|ZP_03071645.1| flagellar protein export ATPase FliI [Escherichia coli 101-1]
 gi|195939247|ref|ZP_03084629.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208810598|ref|ZP_03252474.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816723|ref|ZP_03257843.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820040|ref|ZP_03260360.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400005|ref|YP_002271057.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4115]
 gi|217328784|ref|ZP_03444865.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           TW14588]
 gi|218554521|ref|YP_002387434.1| flagellum-specific ATP synthase [Escherichia coli IAI1]
 gi|218695546|ref|YP_002403213.1| flagellum-specific ATP synthase [Escherichia coli 55989]
 gi|238901146|ref|YP_002926942.1| flagellum-specific ATP synthase [Escherichia coli BW2952]
 gi|253773110|ref|YP_003035941.1| flagellum-specific ATP synthase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254793591|ref|YP_003078428.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256022401|ref|ZP_05436266.1| flagellum-specific ATP synthase [Escherichia sp. 4_1_40B]
 gi|260844340|ref|YP_003222118.1| flagellum-specific ATP synthase FliI [Escherichia coli O103:H2 str.
           12009]
 gi|260855916|ref|YP_003229807.1| flagellum-specific ATP synthase FliI [Escherichia coli O26:H11 str.
           11368]
 gi|261227564|ref|ZP_05941845.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254612|ref|ZP_05947145.1| flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           FRIK966]
 gi|293410297|ref|ZP_06653873.1| flagellar protein export ATPase FliI [Escherichia coli B354]
 gi|300818639|ref|ZP_07098847.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|300822289|ref|ZP_07102430.1| flagellar protein export ATPase FliI [Escherichia coli MS 119-7]
 gi|300931154|ref|ZP_07146501.1| flagellar protein export ATPase FliI [Escherichia coli MS 187-1]
 gi|300951566|ref|ZP_07165399.1| flagellar protein export ATPase FliI [Escherichia coli MS 116-1]
 gi|300956543|ref|ZP_07168825.1| flagellar protein export ATPase FliI [Escherichia coli MS 175-1]
 gi|301029398|ref|ZP_07192492.1| flagellar protein export ATPase FliI [Escherichia coli MS 196-1]
 gi|307138608|ref|ZP_07497964.1| flagellum-specific ATP synthase [Escherichia coli H736]
 gi|307312473|ref|ZP_07592107.1| ATPase, FliI/YscN family [Escherichia coli W]
 gi|312973842|ref|ZP_07788014.1| flagellar protein export ATPase FliI [Escherichia coli 1827-70]
 gi|331642562|ref|ZP_08343697.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331647535|ref|ZP_08348627.1| flagellar protein export ATPase FliI [Escherichia coli M605]
 gi|331663437|ref|ZP_08364347.1| flagellar protein export ATPase FliI [Escherichia coli TA143]
 gi|331668632|ref|ZP_08369480.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
 gi|331683493|ref|ZP_08384094.1| flagellar protein export ATPase FliI [Escherichia coli H299]
 gi|2506213|sp|P52612|FLII_ECOLI RecName: Full=Flagellum-specific ATP synthase
 gi|1736607|dbj|BAA15766.1| flagellum-specific ATP synthase [Escherichia coli str. K12 substr.
           W3110]
 gi|1788251|gb|AAC75008.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|73855958|gb|AAZ88665.1| flagellum-specific ATP synthase [Shigella sonnei Ss046]
 gi|157067092|gb|ABV06347.1| flagellar protein export ATPase FliI [Escherichia coli HS]
 gi|169754654|gb|ACA77353.1| ATPase, FliI/YscN family [Escherichia coli ATCC 8739]
 gi|169889420|gb|ACB03127.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187767372|gb|EDU31216.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014164|gb|EDU52286.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488563|gb|EDU63666.1| flagellar protein export ATPase FliI [Escherichia coli 53638]
 gi|188999264|gb|EDU68250.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354924|gb|EDU73343.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4401]
 gi|189359728|gb|EDU78147.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365543|gb|EDU83959.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370203|gb|EDU88619.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC869]
 gi|189375695|gb|EDU94111.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC508]
 gi|192925970|gb|EDV80616.1| flagellar protein export ATPase FliI [Escherichia coli E22]
 gi|192955548|gb|EDV86027.1| flagellar protein export ATPase FliI [Escherichia coli E110019]
 gi|194412018|gb|EDX28330.1| flagellar protein export ATPase FliI [Escherichia coli B171]
 gi|194421481|gb|EDX37495.1| flagellar protein export ATPase FliI [Escherichia coli 101-1]
 gi|208725114|gb|EDZ74821.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731066|gb|EDZ79755.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740163|gb|EDZ87845.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161405|gb|ACI38838.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4115]
 gi|209748380|gb|ACI72497.1| flagellum-specific ATP synthase [Escherichia coli]
 gi|209748382|gb|ACI72498.1| flagellum-specific ATP synthase [Escherichia coli]
 gi|209748384|gb|ACI72499.1| flagellum-specific ATP synthase [Escherichia coli]
 gi|217318131|gb|EEC26558.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           TW14588]
 gi|218352278|emb|CAU98035.1| flagellum-specific ATP synthase [Escherichia coli 55989]
 gi|218361289|emb|CAQ98873.1| flagellum-specific ATP synthase [Escherichia coli IAI1]
 gi|222033680|emb|CAP76421.1| flagellum-specific ATP synthase [Escherichia coli LF82]
 gi|238861118|gb|ACR63116.1| flagellum-specific ATP synthase [Escherichia coli BW2952]
 gi|253324154|gb|ACT28756.1| ATPase, FliI/YscN family [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254592991|gb|ACT72352.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257754565|dbj|BAI26067.1| flagellum-specific ATP synthase FliI [Escherichia coli O26:H11 str.
           11368]
 gi|257759487|dbj|BAI30984.1| flagellum-specific ATP synthase FliI [Escherichia coli O103:H2 str.
           12009]
 gi|260448946|gb|ACX39368.1| ATPase, FliI/YscN family [Escherichia coli DH1]
 gi|281179003|dbj|BAI55333.1| flagellum-specific ATP synthase [Escherichia coli SE15]
 gi|291470765|gb|EFF13249.1| flagellar protein export ATPase FliI [Escherichia coli B354]
 gi|299877702|gb|EFI85913.1| flagellar protein export ATPase FliI [Escherichia coli MS 196-1]
 gi|300316643|gb|EFJ66427.1| flagellar protein export ATPase FliI [Escherichia coli MS 175-1]
 gi|300449193|gb|EFK12813.1| flagellar protein export ATPase FliI [Escherichia coli MS 116-1]
 gi|300461011|gb|EFK24504.1| flagellar protein export ATPase FliI [Escherichia coli MS 187-1]
 gi|300525172|gb|EFK46241.1| flagellar protein export ATPase FliI [Escherichia coli MS 119-7]
 gi|300528811|gb|EFK49873.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|306907644|gb|EFN38147.1| ATPase, FliI/YscN family [Escherichia coli W]
 gi|309702230|emb|CBJ01547.1| flagellum-specific ATP synthase [Escherichia coli ETEC H10407]
 gi|310332437|gb|EFP99672.1| flagellar protein export ATPase FliI [Escherichia coli 1827-70]
 gi|312946534|gb|ADR27361.1| flagellum-specific ATP synthase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315061241|gb|ADT75568.1| flagellum-specific ATP synthase [Escherichia coli W]
 gi|315136578|dbj|BAJ43737.1| flagellum-specific ATP synthase [Escherichia coli DH1]
 gi|320191915|gb|EFW66562.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           EC1212]
 gi|320641789|gb|EFX11177.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           G5101]
 gi|320647148|gb|EFX15981.1| flagellum-specific ATP synthase [Escherichia coli O157:H- str.
           493-89]
 gi|320652432|gb|EFX20730.1| flagellum-specific ATP synthase [Escherichia coli O157:H- str. H
           2687]
 gi|320658034|gb|EFX25796.1| flagellum-specific ATP synthase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658606|gb|EFX26300.1| flagellum-specific ATP synthase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320668504|gb|EFX35331.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323152728|gb|EFZ39000.1| flagellar protein export ATPase FliI [Escherichia coli EPECa14]
 gi|323158580|gb|EFZ44594.1| flagellar protein export ATPase FliI [Escherichia coli E128010]
 gi|323168940|gb|EFZ54620.1| flagellar protein export ATPase FliI [Shigella sonnei 53G]
 gi|323174680|gb|EFZ60300.1| flagellar protein export ATPase FliI [Escherichia coli LT-68]
 gi|323378182|gb|ADX50450.1| ATPase, FliI/YscN family [Escherichia coli KO11]
 gi|323937211|gb|EGB33491.1| ATPase FliI/YscN family protein [Escherichia coli E1520]
 gi|323940400|gb|EGB36591.1| ATPase FliI/YscN family protein [Escherichia coli E482]
 gi|323948355|gb|EGB44342.1| ATPase FliI/YscN family protein [Escherichia coli H120]
 gi|323961985|gb|EGB57584.1| ATPase FliI/YscN family protein [Escherichia coli H489]
 gi|323972759|gb|EGB67959.1| ATPase FliI/YscN family protein [Escherichia coli TA007]
 gi|324018849|gb|EGB88068.1| flagellar protein export ATPase FliI [Escherichia coli MS 117-3]
 gi|326344856|gb|EGD68603.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           1125]
 gi|330911747|gb|EGH40257.1| flagellum-specific ATP synthase FliI [Escherichia coli AA86]
 gi|331039360|gb|EGI11580.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331043259|gb|EGI15397.1| flagellar protein export ATPase FliI [Escherichia coli M605]
 gi|331059236|gb|EGI31213.1| flagellar protein export ATPase FliI [Escherichia coli TA143]
 gi|331063826|gb|EGI35737.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
 gi|331079708|gb|EGI50905.1| flagellar protein export ATPase FliI [Escherichia coli H299]
 gi|332093102|gb|EGI98166.1| flagellar protein export ATPase FliI [Shigella boydii 5216-82]
 gi|332343667|gb|AEE57001.1| flagellar protein export ATPase FliI [Escherichia coli UMNK88]
          Length = 457

 Score =  256 bits (654), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|59712456|ref|YP_205232.1| flagellum-specific ATP synthase [Vibrio fischeri ES114]
 gi|197335284|ref|YP_002156675.1| flagellar protein export ATPase FliI [Vibrio fischeri MJ11]
 gi|59480557|gb|AAW86344.1| flagellum-specific ATP synthase FliI [Vibrio fischeri ES114]
 gi|197316774|gb|ACH66221.1| flagellar protein export ATPase FliI [Vibrio fischeri MJ11]
          Length = 439

 Score =  256 bits (654), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 135/336 (40%), Positives = 209/336 (62%), Gaps = 2/336 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ +G PIDG   L     +      + P ++R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVVDGVGNPIDGLGELYTEHTASFTSEPINP-LSRKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG +  ++SVVV 
Sbjct: 161 RLGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGPEGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D S ++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASALMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGNENQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +    +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITDEEHMLMSKAVRQVLSTCRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +D+A    P + ++L+Q   +    D+ + + K L
Sbjct: 401 AIDQAFTLKPRLDEYLQQRMKESVPYDMCKNMLKML 436


>gi|15831934|ref|NP_310707.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|13362148|dbj|BAB36103.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|326342351|gb|EGD66132.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           1044]
          Length = 457

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|107025875|ref|YP_623386.1| ATP synthase FliI/YscN [Burkholderia cenocepacia AU 1054]
 gi|105895249|gb|ABF78413.1| ATP synthase FliI/YscN [Burkholderia cenocepacia AU 1054]
          Length = 458

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 160/382 (41%), Positives = 220/382 (57%), Gaps = 10/382 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 76  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLD-DR 134

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 135 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 194

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER
Sbjct: 255 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 314

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA+ +VLV+G   +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS
Sbjct: 315 AG--QGAHGSITALYTVLVEGGEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 372

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     S   +   + +  LI +++E   +  IG YR G D + D A+     I  F
Sbjct: 373 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 432

Query: 417 LKQSPSDLSSEDV-FQEITKKL 437
             Q+    S EDV F  +  KL
Sbjct: 433 CAQA----SDEDVRFDALLAKL 450


>gi|189426350|ref|YP_001953527.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ]
 gi|189422609|gb|ACD97007.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ]
          Length = 432

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 142/335 (42%), Positives = 203/335 (60%), Gaps = 6/335 (1%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+ P     GRVI+ LG PID    L   D    I +     M R  + +    GIR I
Sbjct: 89  LRVGPG--LLGRVIDGLGNPIDDKGPL-HLDEEYPIYAAPVNPMKRPPIRRPLDLGIRSI 145

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           +       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+GERGRE+REF+E  L +
Sbjct: 146 NGLLTCGQGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFVEKDLQE 205

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L KSVVVVATSD+ P++R      A TIAEYF  +G  VL+++DS TRFA ++RE+  
Sbjct: 206 QGLHKSVVVVATSDQPPLVRMRGAYLATTIAEYFKDQGKKVLMMMDSATRFAMAMREVGL 265

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             GE P  +GY  SVF+ LP+LLER G     +G+IT + +VLV+GD+ N+PI+D++RSI
Sbjct: 266 AIGEPPTTKGYTPSVFAALPKLLERTG--NFPEGSITGLYTVLVEGDDFNEPISDAMRSI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIVL+R LA    YPP+D +AS SR+         +KL       +  + ++ D+  
Sbjct: 324 LDGHIVLSRDLAARNIYPPIDIMASASRVMADVADERHRKLAGQFKETLATYRQSEDLIN 383

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           IG Y+ G +  +D+A+ ++  +  + KQ+ +D ++
Sbjct: 384 IGAYKAGSNPGIDQAIRKIDAMTAYQKQAVADPAT 418


>gi|90411026|ref|ZP_01219040.1| flagellum-specific ATP synthase [Photobacterium profundum 3TCK]
 gi|90328239|gb|EAS44550.1| flagellum-specific ATP synthase [Photobacterium profundum 3TCK]
          Length = 440

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 156/401 (38%), Positives = 236/401 (58%), Gaps = 25/401 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDL----- 86
           V  T+  +     +G   + +  N D   +V+  + +I+++ P     E  LG +     
Sbjct: 31  VGLTLEAIGCRAPVGSLCIVETLNGDLEAEVVGFSGEILFLMP----SEQLLGVMPGAKV 86

Query: 87  --VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMN---RQR 140
             V H     +       GRVI+ +G P+DG      GD+  E   S   PA+N   R+ 
Sbjct: 87  TPVLHDNGLPVGSE--LLGRVIDGVGNPLDG-----LGDIFTEKRASFTSPAINPLSRKP 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +++    GI+ I+    +  GQRIG+FAGSG+GKS  L M  R      V++ L+GERGR
Sbjct: 140 IKEPLDVGIKAINGLLSVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGR 199

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFI++ LG+   K++VV+ A +D SP++R     TA+TIAEYF  +G +VLL++DS+
Sbjct: 200 EVKEFIDEILGEEGRKRAVVIAAPADTSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSL 259

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REIA + GE P  +GYP SVF++LP L+ER G    ++G+ITA  +VL +GD+
Sbjct: 260 TRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGSGDQGSITAFFTVLTEGDD 319

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+   A   DE  L+S ++  
Sbjct: 320 LQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVM-PAIVDDEHMLMSKAVRQ 378

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           ++    + +D+  IG Y+PG D  +D+A    P +  +L+Q
Sbjct: 379 ILSICRKNQDLVSIGAYKPGTDPNIDQAFSFKPKLDAYLQQ 419


>gi|300904831|ref|ZP_07122657.1| flagellar protein export ATPase FliI [Escherichia coli MS 84-1]
 gi|301305284|ref|ZP_07211381.1| flagellar protein export ATPase FliI [Escherichia coli MS 124-1]
 gi|300403258|gb|EFJ86796.1| flagellar protein export ATPase FliI [Escherichia coli MS 84-1]
 gi|300839490|gb|EFK67250.1| flagellar protein export ATPase FliI [Escherichia coli MS 124-1]
 gi|315257227|gb|EFU37195.1| flagellar protein export ATPase FliI [Escherichia coli MS 85-1]
          Length = 457

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAITALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|218887523|ref|YP_002436844.1| type III secretion system ATPase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758477|gb|ACL09376.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 438

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 145/327 (44%), Positives = 204/327 (62%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P+DG   L K      + ++ P  M R+ +++    G+RV+D       GQ
Sbjct: 104 GRVLDGLGEPMDGGPPL-KPRTRYPVYAQPPNPMQRRIIDRPISLGLRVLDGVLTCGEGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FA +G GKSTLLS   +    D  +++L+GERGREVREFIE  LG +  KK+V+VV
Sbjct: 163 RMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREVREFIEHDLGPEGRKKAVLVV 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +TSD S + R  A  TA  IAEYF  +  +VLL++DS+TRF  + REI   +GE P  RG
Sbjct: 223 STSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVFS LPRL+ER G S+K  G+ITA+ +VLV+GD+  +PIAD  RSILDGHIVL+R 
Sbjct: 283 FPPSVFSTLPRLMERAGNSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRK 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D  ASVSR+ +     + K     L  ++ ++ E   +  IG Y+ G D 
Sbjct: 341 LAAANHYPAIDVQASVSRVMNAIVDKEHKAAAQKLRKVLAKYAEVELLVQIGEYKRGSDK 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
             D+A+ +V  +  FL+Q   + S  D
Sbjct: 401 EADEALDRVAAVNAFLRQGLDERSGFD 427


>gi|293446321|ref|ZP_06662743.1| flagellar protein export ATPase FliI [Escherichia coli B088]
 gi|291323151|gb|EFE62579.1| flagellar protein export ATPase FliI [Escherichia coli B088]
          Length = 467

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 125 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 183

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 184 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 243

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 244 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 303

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 304 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 363

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 364 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 423

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 424 SDPMLDKAIALWPQLEGYLQQ 444


>gi|253688955|ref|YP_003018145.1| ATPase, FliI/YscN family [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755533|gb|ACT13609.1| ATPase, FliI/YscN family [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 456

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 192/318 (60%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++   KP+DG  +   G  +  I     P + R  +E     G+R I+    +  GQ
Sbjct: 117 GRVLDGSAKPLDGLPAPDTGYRAPLITPPFNP-LQRTPIESVLDVGVRAINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGYHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R 
Sbjct: 296 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR             V     L+  ++  RD+  +G Y  G D 
Sbjct: 356 LAESGHYPAIDIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 415

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LDKA+   P +  FL+Q
Sbjct: 416 MLDKAIRLYPHLEAFLQQ 433


>gi|323496552|ref|ZP_08101606.1| flagellum-specific ATP synthase [Vibrio sinaloensis DSM 21326]
 gi|323318396|gb|EGA71353.1| flagellum-specific ATP synthase [Vibrio sinaloensis DSM 21326]
          Length = 440

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEKRASFNADPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    ++G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSPDQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  S +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQS 420
            +D A    P +  +L+Q+
Sbjct: 401 AIDGAFTIKPKLDGYLQQA 419


>gi|258626180|ref|ZP_05721028.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
 gi|258581535|gb|EEW06436.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
          Length = 439

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 204/320 (63%), Gaps = 4/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAVPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQS 420
             +D A    P +  +L+Q+
Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419


>gi|330809240|ref|YP_004353702.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377348|gb|AEA68698.1| Putative flagellum-specific ATP synthase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 450

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 159/420 (37%), Positives = 251/420 (59%), Gaps = 9/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG-QVIRINLDIVYICPVGIGEEI 81
           G +SSI  +    T L   V LG+ V +H  +  + +  +V+ +  +   + P G  + +
Sbjct: 25  GRLSSIQGMVLHATGLD--VRLGELVDIHPARGGEVIAAEVVGLRSESTLLMPYGPVDGL 82

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            L   V   G  + +   A   GRV++A   P+D   +          ++ + P ++R  
Sbjct: 83  CLASEVHARGTPYTVPVGASLLGRVLDATCNPLDDLPAPEGLTRKPRFVAPINP-LHRSP 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           ++    TG++ +D+FTPL  GQRIG+FAGSG+GKSTLL M ++    D ++I+L+GERGR
Sbjct: 142 IDTTLLTGVKAVDVFTPLGRGQRIGIFAGSGVGKSTLLGMMSKYADADVIVIALIGERGR 201

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV +FI D LG + LKK+VV+ A +++  +LR+ A  TA TIAE+F ++G +VLLI+DSI
Sbjct: 202 EVGDFIRDSLGPEGLKKAVVIAAAAEQPAVLRRQAAYTATTIAEWFRAQGKHVLLIMDSI 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI  ++GE   +RGY  SVF+ LP L+ER G +   +G+IT V +VLV+GD+
Sbjct: 262 TRFALAQREIGLSTGEPMGSRGYTPSVFALLPPLMERAG-ALNGQGSITGVYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+P+AD +R+ILDGHIVL+RS+A  G +P +D L S+SRL     + + K  V  L   
Sbjct: 321 MNEPVADHMRAILDGHIVLSRSVAARGHWPAIDVLHSISRLVGALHTPERKTQVERLRSA 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
           +  ++ + D+  +G Y  G   +LD  +   P     L+Q+P +  S+   +Q + + +Q
Sbjct: 381 LGNYQNSVDLIELGAYEKGSQPLLDTMIDLKPEFDALLQQTPQEHFSASSTWQTVQQLVQ 440


>gi|153834126|ref|ZP_01986793.1| flagellar protein export ATPase FliI [Vibrio harveyi HY01]
 gi|156975428|ref|YP_001446335.1| flagellum-specific ATP synthase [Vibrio harveyi ATCC BAA-1116]
 gi|269961622|ref|ZP_06175984.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3]
 gi|148869496|gb|EDL68494.1| flagellar protein export ATPase FliI [Vibrio harveyi HY01]
 gi|156527022|gb|ABU72108.1| hypothetical protein VIBHAR_03159 [Vibrio harveyi ATCC BAA-1116]
 gi|269833663|gb|EEZ87760.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3]
          Length = 439

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   L     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    ++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGDDQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A    P + ++L+Q
Sbjct: 401 AIDGAFTLKPKLDEYLQQ 418


>gi|296103561|ref|YP_003613707.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058020|gb|ADF62758.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 456

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  +    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPAPDTTETGALITQPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      +      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  FL+Q
Sbjct: 414 SDPMLDKAISLWPQLEAFLQQ 434


>gi|84388114|ref|ZP_00991010.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01]
 gi|84377181|gb|EAP94051.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01]
          Length = 439

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 134/318 (42%), Positives = 201/318 (63%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  K+SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTNAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+ +AEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALAVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G    E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+  +  + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D A    P + ++L+Q
Sbjct: 401 AIDSAFTLKPRLDEYLQQ 418


>gi|253998471|ref|YP_003050534.1| FliI/YscN family ATPase [Methylovorus sp. SIP3-4]
 gi|313200546|ref|YP_004039204.1| FliI/YscN family ATPase [Methylovorus sp. MP688]
 gi|253985150|gb|ACT50007.1| ATPase, FliI/YscN family [Methylovorus sp. SIP3-4]
 gi|312439862|gb|ADQ83968.1| ATPase, FliI/YscN family [Methylovorus sp. MP688]
          Length = 468

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 197/318 (61%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G+P+D    L   + S+ + ++    + R  +      G+R I+    +  GQ
Sbjct: 131 GRVVDGAGRPLDDLGPLLTQN-SVPLNTRPLNPLMRAPITDVLDVGVRAINSMLTVGRGQ 189

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG D L +SVVV 
Sbjct: 190 RMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGTDGLARSVVVA 249

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D   ++R      A  IAE+F ++G NVLLI+DS+TR+A + REIA   GE P  +G
Sbjct: 250 APADVPALMRLQGASYATAIAEFFRNQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKG 309

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RS
Sbjct: 310 YPPSVFAKLPALVERAGNGRPGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRS 369

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D   S+SR        + +KL   L  L  R+  + D+  +G Y  G D 
Sbjct: 370 LAESGHYPAIDIEQSISRAMHNITLPEHQKLSRRLKQLNSRYTRSADLINVGAYEAGSDP 429

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD+A+ +   I  FL+Q
Sbjct: 430 VLDEAIAKHTKIEAFLQQ 447


>gi|261209866|ref|ZP_05924167.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC341]
 gi|260841052|gb|EEX67577.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC341]
          Length = 439

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 138/319 (43%), Positives = 204/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +    + + P + R+ + +    G++ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAAPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             +D A    P +  +L+Q
Sbjct: 400 KAIDAAFTLKPKLDQYLQQ 418


>gi|11095421|gb|AAG29861.1|AF313764_4 probable H+-transporting ATP synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 443

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 137/321 (42%), Positives = 199/321 (61%), Gaps = 6/321 (1%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRVI ALG+P+D   +LG    D    ++ K+   +NR RV   F  G+R I+      
Sbjct: 105 LGRVIGALGEPLD---NLGPIITDEYWPLVGKMGNPLNRGRVTSPFDMGVRAINALLTAG 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218
            GQRI + AGSG+GKS L+         D ++  L+GER REV +F+E  + D+++ KSV
Sbjct: 162 VGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSV 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV  ++D  P+LR  A + A  IAEYF +KG NVLL+ DS+TR AH+ RE+  + GE P 
Sbjct: 222 VVAGSADHPPVLRLRAAMRATAIAEYFRAKGKNVLLLNDSLTRIAHAQREVGLSLGEPPT 281

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP S    +PRL+ER G     KG ITA+ +VL DGD+ +DPI D+ R+I+DGHI+L
Sbjct: 282 IKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADGDDPDDPIVDTARAIVDGHIIL 341

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE+G +P +D   S+SR+     S   ++  + L  L   +EE RD+ L+G YR G
Sbjct: 342 SRSLAEQGVFPAIDLGKSLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRSG 401

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D  +D+A+++   + DF++Q
Sbjct: 402 TDASIDEAINRHNDVLDFIRQ 422


>gi|170682688|ref|YP_001743304.1| flagellum-specific ATP synthase [Escherichia coli SMS-3-5]
 gi|170520406|gb|ACB18584.1| flagellar protein export ATPase FliI [Escherichia coli SMS-3-5]
          Length = 457

 Score =  255 bits (652), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 194/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+   G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSFGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|78355397|ref|YP_386846.1| ATPase FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans
           str. G20]
 gi|78217802|gb|ABB37151.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 440

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 203/327 (62%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR  +A G P+DG  ++        I ++ P  ++R R++     G+R I+    L  GQ
Sbjct: 100 GRAFDAFGAPMDGS-TMPPVAGHNPIYAQPPNPLSRPRIDDPLDVGVRCINSLITLGKGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+ AGSG+GKSTL+ M AR    D  +I+L+GERGREV EF+E  LG + + +SV+++
Sbjct: 159 RVGIMAGSGVGKSTLMGMMARYTSADVNVIALIGERGREVVEFMEKDLGPEGMARSVLII 218

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+SP++R  A   A  +AE+F  +G +VLL++DS+TRFA + RE+    GE P  +G
Sbjct: 219 ATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKG 278

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  +VF++LP+LLER G      G IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R 
Sbjct: 279 YTPTVFAQLPKLLERAG--RNRHGTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRD 336

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D L S+SRL       +      +LT  +  F +  D+  IG Y  G + 
Sbjct: 337 LADMGHYPAIDVLRSISRLRTDICPQEVIAAGRTLTRHLATFRKVEDMINIGAYAQGSNP 396

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +D+A+  VP I  FL+Q   D  + D
Sbjct: 397 DIDQAIGMVPRINQFLQQQVQDKQAID 423


>gi|15642129|ref|NP_231761.1| flagellum-specific ATP synthase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121586784|ref|ZP_01676566.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 2740-80]
 gi|121727214|ref|ZP_01680381.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V52]
 gi|153213229|ref|ZP_01948641.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 1587]
 gi|153818975|ref|ZP_01971642.1| flagellum-specific ATP synthase FliI [Vibrio cholerae NCTC 8457]
 gi|153822887|ref|ZP_01975554.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|153828592|ref|ZP_01981259.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 623-39]
 gi|227082255|ref|YP_002810806.1| flagellum-specific ATP synthase FliI [Vibrio cholerae M66-2]
 gi|229507785|ref|ZP_04397290.1| flagellum-specific ATP synthase FliI [Vibrio cholerae BX 330286]
 gi|229511978|ref|ZP_04401457.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|229519114|ref|ZP_04408557.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC9]
 gi|229607330|ref|YP_002877978.1| flagellum-specific ATP synthase [Vibrio cholerae MJ-1236]
 gi|254226362|ref|ZP_04919951.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V51]
 gi|254291367|ref|ZP_04962160.1| flagellum-specific ATP synthase FliI [Vibrio cholerae AM-19226]
 gi|254849216|ref|ZP_05238566.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MO10]
 gi|255745131|ref|ZP_05419080.1| flagellum-specific ATP synthase FliI [Vibrio cholera CIRS 101]
 gi|262153479|ref|ZP_06028609.1| flagellum-specific ATP synthase FliI [Vibrio cholerae INDRE 91/1]
 gi|262191380|ref|ZP_06049570.1| flagellum-specific ATP synthase FliI [Vibrio cholerae CT 5369-93]
 gi|298497848|ref|ZP_07007655.1| flagellar protein export ATPase FliI [Vibrio cholerae MAK 757]
 gi|9656681|gb|AAF95275.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121548951|gb|EAX58990.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 2740-80]
 gi|121630459|gb|EAX62852.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V52]
 gi|124116029|gb|EAY34849.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 1587]
 gi|125621112|gb|EAZ49457.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V51]
 gi|126510470|gb|EAZ73064.1| flagellum-specific ATP synthase FliI [Vibrio cholerae NCTC 8457]
 gi|126519583|gb|EAZ76806.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|148875863|gb|EDL73998.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 623-39]
 gi|150422697|gb|EDN14651.1| flagellum-specific ATP synthase FliI [Vibrio cholerae AM-19226]
 gi|227010143|gb|ACP06355.1| flagellum-specific ATP synthase FliI [Vibrio cholerae M66-2]
 gi|229343803|gb|EEO08778.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC9]
 gi|229351943|gb|EEO16884.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|229355290|gb|EEO20211.1| flagellum-specific ATP synthase FliI [Vibrio cholerae BX 330286]
 gi|229369985|gb|ACQ60408.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MJ-1236]
 gi|254844921|gb|EET23335.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MO10]
 gi|255736961|gb|EET92357.1| flagellum-specific ATP synthase FliI [Vibrio cholera CIRS 101]
 gi|262030716|gb|EEY49350.1| flagellum-specific ATP synthase FliI [Vibrio cholerae INDRE 91/1]
 gi|262032755|gb|EEY51303.1| flagellum-specific ATP synthase FliI [Vibrio cholerae CT 5369-93]
 gi|297542181|gb|EFH78231.1| flagellar protein export ATPase FliI [Vibrio cholerae MAK 757]
          Length = 439

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 204/320 (63%), Gaps = 4/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAIPINP-LARKPINEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQS 420
             +D A    P +  +L+Q+
Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419


>gi|271500083|ref|YP_003333108.1| flagellar protein export ATPase FliI [Dickeya dadantii Ech586]
 gi|270343638|gb|ACZ76403.1| flagellar protein export ATPase FliI [Dickeya dadantii Ech586]
          Length = 456

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/330 (43%), Positives = 198/330 (60%), Gaps = 2/330 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++   KP+DG  +   G  S  +M+     + R  +E     G+R I+    + 
Sbjct: 114 ALLGRVLDGSAKPLDGLPTPDTG-YSAPLMTAPFNPLQRTPIEHVLDVGVRAINALLTVG 172

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SV
Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPA 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR        +    V      +  ++  RD+  +G Y  G
Sbjct: 353 SRQLAESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAG 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            D +LD+A+   P +  FL+Q   + SS D
Sbjct: 413 SDPMLDRAIQLYPQMQHFLQQGMFERSSFD 442


>gi|215487141|ref|YP_002329572.1| flagellum-specific ATP synthase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215265213|emb|CAS09603.1| flagellum-specific ATP synthase FliI [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 457

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLESYLQQ 434


>gi|16520041|ref|NP_444161.1| ATPase RhcN for type III secretion [Sinorhizobium fredii NGR234]
 gi|2493150|sp|P55717|Y4YI_RHISN RecName: Full=Probable ATP synthase y4yI
 gi|2182734|gb|AAB91948.1| ATPase RhcN for type III secretion [Sinorhizobium fredii NGR234]
          Length = 451

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/358 (41%), Positives = 210/358 (58%), Gaps = 5/358 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    +S    V   GR R  P      GRVI++  +P+DG   +   ++   +
Sbjct: 83  VLLTPIGGLAGLSSRAEVVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVR-PL 141

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  M R+ VE+ F  G+R +D       GQRIG++   G GKSTL+S   +    D
Sbjct: 142 HGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAAD 201

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VI++L+GERGREVREF+E +LG+  L++++VVV TSD S   R      A  +AEYF  
Sbjct: 202 VVIVALIGERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFRE 261

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  V L+LDS+TRF  ++REI   +GE P  RG+P SVF+ LP LLER G  E+  G+I
Sbjct: 262 QGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAGLGER--GSI 319

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLV+GD   DPIA+  R ILDGHIVL+R+LA    +P +D L S SR+ D   S 
Sbjct: 320 TAFYTVLVEGDGTGDPIAEESRGILDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSE 379

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +K  S    L+ R+ E   +  +G Y+ G D + D+AV  +  + +FL+QS  ++S
Sbjct: 380 THRKAASFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVS 437


>gi|51246511|ref|YP_066395.1| flagellum-specific ATP synthase (FliI) [Desulfotalea psychrophila
           LSv54]
 gi|50877548|emb|CAG37388.1| probable flagellum-specific ATP synthase (FliI) [Desulfotalea
           psychrophila LSv54]
          Length = 434

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/367 (41%), Positives = 218/367 (59%), Gaps = 12/367 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDG 115
            G+V+      V + P+G    +  G L+         R+ P     GRVI+ +  P   
Sbjct: 53  FGEVVGFRDGKVLLMPLGELRGLGAGSLIRVIRQSATMRVGPH--LLGRVIDGMEVP--- 107

Query: 116 DDSLGKGDLSMEI-MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            D+L   +LS E+ +  +PP  M R  + +    G+R I+       GQR+G+ AGSG+G
Sbjct: 108 QDTLPPPELSEEVELYALPPNPMLRDNICQPIDLGVRAINGLLTCGLGQRMGIMAGSGVG 167

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           KS LL M A+    D  +I+L+GERGREVREFIE  LG + L +SV+VV TSD+SP+LR 
Sbjct: 168 KSVLLGMMAKYAQADINVIALIGERGREVREFIERDLGPEGLARSVIVVVTSDQSPLLRM 227

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
                A  IAE+F  +G NVLL++DS+TRFA ++REI    GE P  +GY  SVF+ LP+
Sbjct: 228 RGAFVATAIAEFFCKQGKNVLLMMDSVTRFAMAMREIGLAIGEPPTTKGYTPSVFATLPK 287

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER G   K +G+IT + +VLVDGD+  +P+ADSVRSILDGHIVL+R++A +  +P +D
Sbjct: 288 LLERAG-RFKGQGSITGIYTVLVDGDDMTEPVADSVRSILDGHIVLSRAIAAKNHFPAID 346

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS SR+     S +  +L   L  ++  + E  D+  IG Y  G +  +D A+ ++  
Sbjct: 347 ILASASRVMRDIVSPEHIELAGKLRTVLADYREAEDLINIGAYVKGTNKNIDLAIEKIEQ 406

Query: 413 IYDFLKQ 419
              FLKQ
Sbjct: 407 AKLFLKQ 413


>gi|317406228|gb|EFV86474.1| flagellar biosynthesis ATPase FliI [Achromobacter xylosoxidans C54]
          Length = 477

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/345 (41%), Positives = 207/345 (60%), Gaps = 7/345 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  G+P+DG   L   +L+      + P ++R  ++    TG+R I+    + 
Sbjct: 128 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAQPINP-LSRAPIDTVLDTGVRAINGLLTVG 186

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SV
Sbjct: 187 RGQRMGLFAGSGVGKSVLLGMMARYTKADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 246

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D S +LR      A  +AE+F  +G +VLLI+DS+TR+A + R IA   GE P 
Sbjct: 247 VVAAPADVSALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQRGIALAIGEPPA 306

Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +GYP SVF++LP L+ER G   P    K G+ITA  +VL +GD+  DPIADS R+ILDG
Sbjct: 307 TKGYPPSVFAKLPTLVERAGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 366

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           H+VL+R LAE G YP +D  AS+SR      +  +  +V      + R++  RD+  +G 
Sbjct: 367 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITPQQFSVVRRFKQTLSRYQRNRDLIAVGA 426

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS-PSDLSSEDVFQEITKKLQ 438
           Y  G D  LD A+ + P +  FL+Q    ++  ED  +++    +
Sbjct: 427 YAAGNDPQLDDAIARYPRLEAFLQQDIGENVGYEDAVEQLRASFE 471


>gi|268589963|ref|ZP_06124184.1| flagellar protein export ATPase FliI [Providencia rettgeri DSM
           1131]
 gi|291314680|gb|EFE55133.1| flagellar protein export ATPase FliI [Providencia rettgeri DSM
           1131]
          Length = 454

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 203/324 (62%), Gaps = 15/324 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFT 156
           GRV++A G P+DG     KG L  E+ ++ P   P +N   R  +      G+R I+   
Sbjct: 117 GRVLDAQGNPLDG-----KGPL--EVKTRAPLITPPINPLERTPISNVLDVGVRAINALL 169

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D LK
Sbjct: 170 TVGRGQRMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGADGLK 229

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++VVV A +D SP+LR      A  IAEYF   G +VLLI+DS+TR++ + REIA   GE
Sbjct: 230 RAVVVAAPADVSPLLRMQGASYATRIAEYFRDNGLSVLLIMDSLTRYSMAQREIALAVGE 289

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP SVF++LP L+ER G + K  G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 290 PPATKGYPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGH 348

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+RSLAE G YP +D  AS+SR   +    +  + +     L   ++  RD+  +G Y
Sbjct: 349 IVLSRSLAESGHYPAIDIEASISRAMTELIPKEHYRKIQRFKQLTSSYQRNRDLINVGAY 408

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D +LD A+   P +  FL+Q
Sbjct: 409 AMGSDPMLDTAIQYYPRMSKFLQQ 432


>gi|307131592|ref|YP_003883608.1| flagellum-specific ATP synthase fliI [Dickeya dadantii 3937]
 gi|306529121|gb|ADM99051.1| Flagellum-specific ATP synthase fliI [Dickeya dadantii 3937]
          Length = 456

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/339 (42%), Positives = 202/339 (59%), Gaps = 5/339 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++   KP+DG  +   G  +  + +   P + R  +E     G+R I+    + 
Sbjct: 114 ALLGRVLDGSAKPLDGFPAPDTGYTAPLVTAPFNP-LQRTPIEHVLDVGVRAINALLTVG 172

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SV
Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPA 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR        +    V      +  ++  RD+  +G Y  G
Sbjct: 353 SRQLAESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAG 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            D +LD+A+   P +  FL+Q   + SS   F+E  + L
Sbjct: 413 SDPLLDRAIQLYPQMQHFLQQGMFERSS---FEEACQAL 448


>gi|312967138|ref|ZP_07781356.1| flagellar protein export ATPase FliI [Escherichia coli 2362-75]
 gi|312288602|gb|EFR16504.1| flagellar protein export ATPase FliI [Escherichia coli 2362-75]
          Length = 457

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLESYLQQ 434


>gi|229524132|ref|ZP_04413537.1| flagellum-specific ATP synthase FliI [Vibrio cholerae bv. albensis
           VL426]
 gi|229337713|gb|EEO02730.1| flagellum-specific ATP synthase FliI [Vibrio cholerae bv. albensis
           VL426]
          Length = 439

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 204/321 (63%), Gaps = 6/321 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI+ +G P+DG   +      S+  M   P  + R+ + +    GI+ I+    +  G
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+ FIE+ LG D  ++SVVV
Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKAFIEEILGVDGSQRSVVV 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +
Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399
            +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG 
Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D  +D A    P +  +L+Q+
Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419


>gi|320107025|ref|YP_004182615.1| FliI/YscN family ATPase [Terriglobus saanensis SP1PR4]
 gi|319925546|gb|ADV82621.1| ATPase, FliI/YscN family [Terriglobus saanensis SP1PR4]
          Length = 434

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/369 (39%), Positives = 221/369 (59%), Gaps = 5/369 (1%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKP 112
           K   +  +VI      +   P+     I  GD V   G          C GRV++A G+P
Sbjct: 49  KGGYHAAEVIGFRGSHLISMPLSSSRGIRFGDRVMTTGEVPSLGVGEDCLGRVLDARGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           ID +    + +    +   +P AM+R  ++    TG+RV+D    +  GQR+G+F GSG+
Sbjct: 109 ID-ERQAPRVETFRPLDGDLPMAMHRVPIQTPLATGVRVLDAMMTVGRGQRVGIFGGSGV 167

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
           GKSTL+ M  R+   D  I+ LVGERGREVREF+ED LG+   ++SV VV+TSDESP++R
Sbjct: 168 GKSTLIGMMTRNTSADLTIVGLVGERGREVREFLEDSLGEKGRRRSVTVVSTSDESPLMR 227

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A L A T+AE +++KG +VLL+LDS+TR+A + RE+   +GE    +GY  SVF+++ 
Sbjct: 228 MRAALAATTLAESYAAKGKHVLLVLDSLTRYAMAAREVGLAAGEPAATKGYTPSVFAKMA 287

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RL+ER G      G++TA  +VL++GD+  DP+ D+ RS+LDGHIVL+R +A  G YPPV
Sbjct: 288 RLVERAG--NFGTGSMTAFYTVLMEGDDQQDPLVDAARSLLDGHIVLSREMASAGIYPPV 345

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
             L S+SRL     SA+ ++  + +   +  +  + D+  +G Y+ G+D  LD A+   P
Sbjct: 346 HVLDSLSRLMPAVISAEHRQDAAKIRRTMATYARSEDMVRLGMYKSGMDAELDHAIRMHP 405

Query: 412 IIYDFLKQS 420
            I  F +Q+
Sbjct: 406 RIQTFFQQT 414


>gi|119947164|ref|YP_944844.1| ATPase, FliI/YscN family protein [Psychromonas ingrahamii 37]
 gi|119865768|gb|ABM05245.1| ATPase, FliI/YscN family protein [Psychromonas ingrahamii 37]
          Length = 436

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/345 (40%), Positives = 210/345 (60%), Gaps = 18/345 (5%)

Query: 101 WCGRVINALGKPID------GDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           W GRV+NA G+ ID      G D++  +   ++ I+ K P       + + F  GI+ I+
Sbjct: 95  WLGRVLNAHGEAIDDLPSPRGIDTITLRSAEAINILKKKP-------ISEPFDVGIKSIN 147

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
               L  GQR+G+ AGSG+GKS L+ M  +    D V++ L+GER REVREFIE  +G +
Sbjct: 148 GLLTLAKGQRVGLVAGSGVGKSVLMGMITKFSEADVVVVGLIGERNREVREFIEKNIGAE 207

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LKKSVV+ A +D+SP++R  A     ++AEY+  KG NVLL++DS+TR+A + RE+A +
Sbjct: 208 GLKKSVVIAAPADQSPLMRIQATELCHSVAEYYRDKGANVLLLVDSLTRYAMAQREVAIS 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GELP  +GYP SVFS +P LLER G   +  G +TA+ ++L +GD   DP+ D+ ++IL
Sbjct: 268 LGELPAIKGYPPSVFSFIPPLLERSGNGHENAGTMTAIYTILSEGDEDYDPVVDTAKAIL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIVL++ LA+ G++P VD   S+SR  D   S    ++      L   + + +D+  +
Sbjct: 328 DGHIVLSKELAQRGQFPAVDIEKSISRCMDAVVSEPHLQIARQCKRLYSMYNKAKDLIAL 387

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           GGY+ G D  LD+A+ + PII   L Q+     S   F+E  ++L
Sbjct: 388 GGYQQGNDPELDEAIQKNPIIEKLLMQNTIQYVS---FEESCQQL 429


>gi|332756097|gb|EGJ86450.1| flagellar protein export ATPase FliI [Shigella flexneri 4343-70]
          Length = 457

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|261344123|ref|ZP_05971767.1| flagellar protein export ATPase FliI [Providencia rustigianii DSM
           4541]
 gi|282567715|gb|EFB73250.1| flagellar protein export ATPase FliI [Providencia rustigianii DSM
           4541]
          Length = 454

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/318 (44%), Positives = 199/318 (62%), Gaps = 3/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++A G P+DG   L     +  I   + P + R  +      G+R I+    +  GQ
Sbjct: 117 GRVLDAQGTPLDGKGPLETKARAPLITPPINP-LERTPIHSVLDVGVRAINSLLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D L+++VVV 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGADGLRRAVVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAEYF  +G +VLLI+DS+TR++ + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGASYATRIAEYFRDQGKSVLLIMDSLTRYSMAQREIALAVGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G + K  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RS
Sbjct: 296 YPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 354

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR      + +  + +     L   ++  RD+  +G Y  G D 
Sbjct: 355 LAESGHYPAIDIEASISRAMTDLIAKEHYRKIQRFKQLTSSYQRNRDLINVGAYAMGSDP 414

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD A+   P +  FL+Q
Sbjct: 415 MLDTAIQYYPRMSKFLQQ 432


>gi|254517010|ref|ZP_05129068.1| flagellar protein export ATPase FliI [gamma proteobacterium NOR5-3]
 gi|219674515|gb|EED30883.1| flagellar protein export ATPase FliI [gamma proteobacterium NOR5-3]
          Length = 456

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 199/318 (62%), Gaps = 4/318 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+  G+ +DG  +       + + +K    ++R+ + +    G+R I+ F  +  GQ
Sbjct: 113 GRVIDGAGRFLDGGPA-PHCSHRVALRAKALNPLDRRPIREPLDVGVRAINGFLTMGKGQ 171

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           R+G+FAGSG+GKSTLL M  R    D +++ LVGERGREVREFIED LG   L +++VV 
Sbjct: 172 RLGLFAGSGVGKSTLLGMMTRHTEADVIVVGLVGERGREVREFIEDILGPAGLARAIVVA 231

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +D  P++R      A  IAE+F  +G +VLL++DS+TRFA + REI    GE PV++G
Sbjct: 232 TPADYPPLMRVHGAWRATAIAEHFRDQGRDVLLLMDSLTRFAQAQREIGLAVGEPPVSKG 291

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVFS LP L+ER G      G+ITAV +VLV+GD+HNDPIAD+ R+ILDGHIVL+R 
Sbjct: 292 YPPSVFSLLPNLVERAG--NGPTGSITAVYTVLVEGDDHNDPIADAARAILDGHIVLSRQ 349

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G +P +D  ASVSR         +++L  +L  L   + + RD+  IG Y  G D 
Sbjct: 350 VADSGLFPAIDLEASVSRAMPSIAQESQQELARALKELYSVYRQNRDLISIGAYEHGSDP 409

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            +D+A+     +   ++Q
Sbjct: 410 KIDQALRAHEPLRQLIRQ 427


>gi|218705434|ref|YP_002412953.1| flagellum-specific ATP synthase [Escherichia coli UMN026]
 gi|293405424|ref|ZP_06649416.1| fliI [Escherichia coli FVEC1412]
 gi|298381068|ref|ZP_06990667.1| fliI [Escherichia coli FVEC1302]
 gi|300899198|ref|ZP_07117474.1| flagellar protein export ATPase FliI [Escherichia coli MS 198-1]
 gi|218432531|emb|CAR13424.1| flagellum-specific ATP synthase [Escherichia coli UMN026]
 gi|291427632|gb|EFF00659.1| fliI [Escherichia coli FVEC1412]
 gi|298278510|gb|EFI20024.1| fliI [Escherichia coli FVEC1302]
 gi|300357179|gb|EFJ73049.1| flagellar protein export ATPase FliI [Escherichia coli MS 198-1]
          Length = 457

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|242238984|ref|YP_002987165.1| ATPase, FliI/YscN family [Dickeya dadantii Ech703]
 gi|242131041|gb|ACS85343.1| ATPase, FliI/YscN family [Dickeya dadantii Ech703]
          Length = 454

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/332 (42%), Positives = 194/332 (58%), Gaps = 6/332 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTP 157
              GR+++  GKP+DG   L   +         PP   + R  ++     G+R I+    
Sbjct: 114 SLLGRILDGAGKPLDG---LPLPETGYRASLTTPPFNPLQRTPIDHVLDVGVRAINALLT 170

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +
Sbjct: 171 VGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRSR 230

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVV+ A +D SP+LR      A  IAE F  KG +VLLI+DS+TR+A + REIA   GE 
Sbjct: 231 SVVIAAPADVSPLLRMQGAAYATRIAEDFRDKGYHVLLIMDSLTRYAMAQREIALAIGEP 290

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP SVF++LP L+ER G      G+IT   +VL +GD+  DPIADS R+ILDGHI
Sbjct: 291 PATKGYPPSVFAKLPALVERAGNGIHGGGSITGFYTVLTEGDDQQDPIADSARAILDGHI 350

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP +D  AS+SR             V     L+  ++  +D+  +G Y 
Sbjct: 351 VLSRQLAESGHYPAIDIEASISRAMTSLIDESHYAKVRQFKQLLSVYQRNKDLISVGAYA 410

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            G D +LDKA+   P +  FL+Q   +   ED
Sbjct: 411 AGSDPLLDKAIKLYPRMESFLQQGMYERCDED 442


>gi|24113316|ref|NP_707826.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 301]
 gi|26248210|ref|NP_754250.1| flagellum-specific ATP synthase [Escherichia coli CFT073]
 gi|30063381|ref|NP_837552.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 2457T]
 gi|110642047|ref|YP_669777.1| flagellum-specific ATP synthase [Escherichia coli 536]
 gi|227885630|ref|ZP_04003435.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|300975545|ref|ZP_07173056.1| flagellar protein export ATPase FliI [Escherichia coli MS 45-1]
 gi|301050699|ref|ZP_07197560.1| flagellar protein export ATPase FliI [Escherichia coli MS 185-1]
 gi|306814236|ref|ZP_07448402.1| flagellum-specific ATP synthase [Escherichia coli NC101]
 gi|331657987|ref|ZP_08358949.1| flagellar protein export ATPase FliI [Escherichia coli TA206]
 gi|26108614|gb|AAN80817.1|AE016762_70 Flagellum-specific ATP synthase [Escherichia coli CFT073]
 gi|24052326|gb|AAN43533.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 301]
 gi|30041633|gb|AAP17361.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 2457T]
 gi|110343639|gb|ABG69876.1| flagellum-specific ATP synthase [Escherichia coli 536]
 gi|227837203|gb|EEJ47669.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|281601381|gb|ADA74365.1| Flagellum-specific ATP synthase [Shigella flexneri 2002017]
 gi|300297622|gb|EFJ54007.1| flagellar protein export ATPase FliI [Escherichia coli MS 185-1]
 gi|300410314|gb|EFJ93852.1| flagellar protein export ATPase FliI [Escherichia coli MS 45-1]
 gi|305852395|gb|EFM52846.1| flagellum-specific ATP synthase [Escherichia coli NC101]
 gi|307553954|gb|ADN46729.1| flagellum-specific ATP synthase [Escherichia coli ABU 83972]
 gi|313650163|gb|EFS14576.1| flagellar protein export ATPase FliI [Shigella flexneri 2a str.
           2457T]
 gi|315290258|gb|EFU49636.1| flagellar protein export ATPase FliI [Escherichia coli MS 153-1]
 gi|320194346|gb|EFW68977.1| Flagellum-specific ATP synthase FliI [Escherichia coli WV_060327]
 gi|324005860|gb|EGB75079.1| flagellar protein export ATPase FliI [Escherichia coli MS 57-2]
 gi|331056235|gb|EGI28244.1| flagellar protein export ATPase FliI [Escherichia coli TA206]
 gi|332757288|gb|EGJ87625.1| flagellar protein export ATPase FliI [Shigella flexneri 2747-71]
 gi|332757507|gb|EGJ87842.1| flagellar protein export ATPase FliI [Shigella flexneri K-671]
 gi|332766679|gb|EGJ96883.1| flagellar protein export ATPase FliI [Shigella flexneri 2930-71]
 gi|333003314|gb|EGK22860.1| flagellar protein export ATPase FliI [Shigella flexneri K-218]
 gi|333017583|gb|EGK36895.1| flagellar protein export ATPase FliI [Shigella flexneri K-304]
          Length = 457

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|110805911|ref|YP_689431.1| flagellum-specific ATP synthase [Shigella flexneri 5 str. 8401]
 gi|110615459|gb|ABF04126.1| flagellum-specific ATP synthase [Shigella flexneri 5 str. 8401]
          Length = 457

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQHNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|333004045|gb|EGK23579.1| flagellar protein export ATPase FliI [Shigella flexneri K-272]
 gi|333017818|gb|EGK37125.1| flagellar protein export ATPase FliI [Shigella flexneri K-227]
          Length = 457

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|183598651|ref|ZP_02960144.1| hypothetical protein PROSTU_02057 [Providencia stuartii ATCC 25827]
 gi|188020836|gb|EDU58876.1| hypothetical protein PROSTU_02057 [Providencia stuartii ATCC 25827]
          Length = 454

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/318 (44%), Positives = 197/318 (61%), Gaps = 3/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++A G P+DG   L     +  I   + P + R  +      G+R I+    +  GQ
Sbjct: 117 GRILDAQGTPLDGKGPLDAKQRAPLITPPINP-LERTPIHSVLDVGVRAINALLTVGRGQ 175

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + LK++VVV 
Sbjct: 176 RMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGAEGLKRAVVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+LR      A  IAEYF   G NVLLI+DS+TR++ + REIA   GE P  +G
Sbjct: 236 APADVSPLLRMQGASYATRIAEYFRDLGKNVLLIMDSLTRYSMAQREIALAIGEPPATKG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G + K  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RS
Sbjct: 296 YPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 354

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D  AS+SR   +       + +     L   ++  RD+  +G Y  G D 
Sbjct: 355 LAESGHYPAIDIEASISRAMTELIDKQHYRQIQRFKQLTSSYQRNRDLINVGAYATGSDP 414

Query: 402 ILDKAVHQVPIIYDFLKQ 419
           +LD A+   P +  FL+Q
Sbjct: 415 LLDMAIQYYPRMSKFLQQ 432


>gi|315296475|gb|EFU55772.1| flagellar protein export ATPase FliI [Escherichia coli MS 16-3]
          Length = 457

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|121608101|ref|YP_995908.1| flagellar protein export ATPase FliI [Verminephrobacter eiseniae
           EF01-2]
 gi|121552741|gb|ABM56890.1| flagellar protein export ATPase FliI [Verminephrobacter eiseniae
           EF01-2]
          Length = 470

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 200/330 (60%), Gaps = 2/330 (0%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GRV++A G P+D    +    L+     ++  AM R  V +   TG+R
Sbjct: 115 GVLRLPMGNGLLGRVVDAQGLPLDHRGPVQDTVLAPMARDRIN-AMERDPVRQPLDTGVR 173

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQR+G+ AGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED L
Sbjct: 174 AINALLTVGRGQRLGLLAGSGVGKSVLLGMMARYTGADVIVVGLIGERGREVKEFVEDIL 233

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G D   +SVVV A +D  P+LR      A  +AE+F  +G +VLL+LDS+TR+A + REI
Sbjct: 234 GADGRARSVVVAAPADAPPLLRMQGASYATAVAEHFRDQGRHVLLLLDSLTRYAMAQREI 293

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP S F+ LP+L+ER G   + +G+ITA  +VL +GD+ +DP+AD+ R
Sbjct: 294 ALAIGEPPATKGYPPSCFARLPQLVERSGNGLQGQGSITAFHTVLTEGDDPHDPVADAAR 353

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGHIVL+R+LAE G +P +D   S SR+  +       +L      L  R+++ RD+
Sbjct: 354 AILDGHIVLSRALAEAGHFPAIDIEQSSSRVMHRLVPDRHLELARRFRALYSRYQKGRDL 413

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             +G Y  G D  LD+A+   P +  FL+Q
Sbjct: 414 LQVGAYASGSDPALDEAIRLQPQMAQFLQQ 443


>gi|94968677|ref|YP_590725.1| ATPase FliI/YscN [Candidatus Koribacter versatilis Ellin345]
 gi|94550727|gb|ABF40651.1| type III secretion system ATPase, FliI/YscN [Candidatus Koribacter
           versatilis Ellin345]
          Length = 437

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/326 (43%), Positives = 210/326 (64%), Gaps = 6/326 (1%)

Query: 103 GRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++A G P+DG   +  +G   ++  + +P A  R  V +    GIR ID F     G
Sbjct: 102 GRVLDATGAPLDGITPARPRGSRPVDGSAPLPYA--RIPVREVMPCGIRAIDGFVTCGRG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QRIG+F GSG+GKSTL+ M  R    D  +++L+GERGREVREF+E+ +G+  ++++VV+
Sbjct: 160 QRIGIFGGSGVGKSTLIGMLTRGSAADVTVLALIGERGREVREFVEESIGEEGMQRAVVI 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           V+TSD+SP+LR  A + A  +AE+F+++G +VLL+LDS+TRF  + REI   +GE P A+
Sbjct: 220 VSTSDQSPLLRLRAAMAATAVAEHFAAEGKHVLLVLDSLTRFGMAQREIGLAAGEPPTAK 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  SVF+ L RL+ER G    E+G+IT   +VL++GD+  DP+ D+VRS+LDGHIVL+R
Sbjct: 280 GYTPSVFTLLARLVERAG--NFERGSITGFYTVLMEGDDLQDPLVDAVRSLLDGHIVLDR 337

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LA +G YPP+  L S+SRLA    S    +    L   +  +  + D+  IG Y+ G D
Sbjct: 338 KLASDGHYPPIQILESLSRLASAVCSVQHLQASRKLRAWLASYVRSEDLIRIGAYQRGGD 397

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
            +LD+AV  +P I   L Q   + +S
Sbjct: 398 PVLDQAVSAMPEIRKLLIQGALERTS 423


>gi|46562141|ref|YP_009159.1| type III secretion system ATPase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120586842|ref|YP_961187.1| type III secretion system ATPase [Desulfovibrio vulgaris subsp.
           vulgaris DP4]
 gi|46447678|gb|AAS94344.1| type III secretion system ATPase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120564256|gb|ABM29999.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio vulgaris
           DP4]
 gi|311235508|gb|ADP88361.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Desulfovibrio vulgaris RCH1]
          Length = 438

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/327 (44%), Positives = 202/327 (61%), Gaps = 4/327 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG PIDG   L K      + +  P  M R+ +++    G+RV+D       GQ
Sbjct: 104 GRVLDGLGDPIDGGPPL-KPRTRYPVYADPPNPMTRRIIDRPISLGLRVLDGVLTCGEGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+FA +G GKSTLLS   +    D  +++L+GERGREVREFIE  LG +  KK+V+VV
Sbjct: 163 RMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREVREFIEHDLGPEGRKKAVLVV 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +TSD S + R  A  TA  IAEYF  +  +VLL++DS+TRF  + REI   +GE P  RG
Sbjct: 223 STSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVFS LPRL+ER G S++  G+ITA+ +VLV+GD+  +PIAD  RSILDGHIVL+R 
Sbjct: 283 FPPSVFSTLPRLMERAGNSDR--GSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRK 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    YP +D  ASVSR+ +     + K     L  ++ ++ E   +  IG Y+ G D 
Sbjct: 341 LAAANHYPAIDVQASVSRVMNAIVGKEHKGAAQKLRKILAKYAEVELLVQIGEYKKGSDK 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
             D A+ +V  +  FL+Q   + S+ D
Sbjct: 401 EADDALARVGAVNAFLRQGLDERSTFD 427


>gi|238752875|ref|ZP_04614340.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
 gi|238708914|gb|EEQ01167.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
          Length = 439

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/373 (39%), Positives = 212/373 (56%), Gaps = 11/373 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + ++ Y+ P    + +  G  VF     G   I  S  W GRV+N LG+PID   
Sbjct: 57  QVVGFDREVTYLMPFKQPDGLIGGARVFPSYLDGELMIGDS--WLGRVVNGLGEPIDDKG 114

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L       + + ++ P + RQ V      G++ I+    +  GQR+G+ AGSG+GKS L
Sbjct: 115 PLSGDTPLQQQLPQIHP-LQRQPVSAPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSML 173

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFIE  L    + KSVV+ A +DESP++R  A  
Sbjct: 174 LGMMTRYTQADVVVVGLIGERGREVKEFIEHSLQASGMAKSVVIAAPADESPLMRIKATE 233

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              +IA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E 
Sbjct: 234 LCHSIATYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 293

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G +TA+ +VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S
Sbjct: 294 AGNSSG-SGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDISQS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR  ++    ++      L      + E + +  +GGY  G D  +D+AV   P I DF
Sbjct: 353 ISRCMNQISPDNQILSARFLKQCYADYMEIKPLIPLGGYVAGADPRVDQAVQYHPAIIDF 412

Query: 417 LKQ---SPSDLSS 426
           L+Q    P+ L++
Sbjct: 413 LRQEVSQPATLAA 425


>gi|312884909|ref|ZP_07744599.1| flagellum-specific ATP synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367386|gb|EFP94948.1| flagellum-specific ATP synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 441

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 204/331 (61%), Gaps = 11/331 (3%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRVI+ +G P+DG   LG    D      S+    + R+ +      GI+ I+    +  
Sbjct: 102 GRVIDGVGNPLDG---LGPIYTDKHASFNSEPINPLTRKPITAPLDVGIKAINGLLTVGK 158

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFI++ LG D  ++SVV
Sbjct: 159 GQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIDEILGVDGRQRSVV 218

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R     TA+T+AE+F  +G +VLL++DS+TRFA + REIA + GE P  
Sbjct: 219 VAAPADASPLMRLKGCQTALTVAEFFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPAT 278

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+
Sbjct: 279 KGYPPSVFAKLPALVERAGNGSDTQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 338

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R +A+ G YP +D   SVSR+  +  S ++  +  ++  ++    +  D+  IG Y+PG 
Sbjct: 339 REMADSGHYPAIDVEKSVSRVMPQIVSEEQLLMSKAVRQVLSICRKNHDLVSIGAYKPGS 398

Query: 400 DLILDKAVHQVPIIYDFLKQS-----PSDLS 425
           D  +D A    P +  +L+Q      P D+S
Sbjct: 399 DAAIDSAFTLKPSLDTYLQQEMKESVPFDMS 429


>gi|52631924|gb|AAU85374.1| putative ATPase [Sinorhizobium fredii]
          Length = 451

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/358 (40%), Positives = 210/358 (58%), Gaps = 5/358 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G    +S    V   GR R  P      GRVI++  +P+DG   +   ++   +
Sbjct: 83  VLLTPIGGLAGLSSRAEVVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVR-PL 141

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  M R+ VE+ F  G+R +D       GQRIG++   G GKSTL+S   +    D
Sbjct: 142 HGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAAD 201

Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VI++L+GERGREVREF+E +LG+  L++++VVV TSD S   R      A  +AEYF  
Sbjct: 202 VVIVALIGERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFRE 261

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  V L+LDS+TRF  ++REI   +GE P  RG+P SVF+ LP LLER G  E+  G+I
Sbjct: 262 QGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAGMGER--GSI 319

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLV+GD   DPIA+  R I+DGHIVL+R+LA    +P +D L S SR+ D   S 
Sbjct: 320 TAFYTVLVEGDGTGDPIAEESRGIVDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSE 379

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +K  S    L+ R+ E   +  +G Y+ G D + D+AV  +  + +FL+QS  ++S
Sbjct: 380 THRKAASFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVS 437


>gi|149188088|ref|ZP_01866383.1| flagellum-specific ATP synthase [Vibrio shilonii AK1]
 gi|148838076|gb|EDL55018.1| flagellum-specific ATP synthase [Vibrio shilonii AK1]
          Length = 440

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 209/338 (61%), Gaps = 6/338 (1%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRVI+ +G P+DG   LG+   D      ++    + R+ + +    G++ I+    +  
Sbjct: 102 GRVIDGVGNPLDG---LGEIYTDKRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGK 158

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           GQRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG + + +SVV
Sbjct: 159 GQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGTSGRERSVV 218

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  
Sbjct: 219 VAAPADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPAT 278

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G  +  +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+
Sbjct: 279 KGYPPSVFAKLPALVERAGNGDVNQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 338

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R +A+ G YP +D   SVSR+  +        +  ++  ++    + +D+  IG Y+PG 
Sbjct: 339 REMADAGHYPAIDVEKSVSRVMPQITDDQHVLMSKAVRQVLSVCRKNQDLVSIGAYKPGT 398

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           D  +D A    P +  +L+QS  +    D+   + K+L
Sbjct: 399 DPAIDSAFTLKPKLDQYLQQSMRETVPYDMCLGMLKQL 436


>gi|300994274|ref|ZP_07180826.1| flagellar protein export ATPase FliI [Escherichia coli MS 200-1]
 gi|300304939|gb|EFJ59459.1| flagellar protein export ATPase FliI [Escherichia coli MS 200-1]
          Length = 457

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMRGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|301644600|ref|ZP_07244589.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
 gi|301077075|gb|EFK91881.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
          Length = 457

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 194/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+  I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVHPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|260772326|ref|ZP_05881242.1| flagellum-specific ATP synthase FliI [Vibrio metschnikovii CIP
           69.14]
 gi|260611465|gb|EEX36668.1| flagellum-specific ATP synthase FliI [Vibrio metschnikovii CIP
           69.14]
          Length = 440

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 202/319 (63%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQQATFNAQPINPLL-RKPITEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  +++VVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRAVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+ IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALAIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPNQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+PG D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHMLMSRAVRQILSICRKNQDLVSIGAYKPGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             +D A    P +  +L+Q
Sbjct: 400 KAIDSAFTLKPRLDQYLQQ 418


>gi|251772441|gb|EES53008.1| flagellar protein export ATPase FliI [Leptospirillum
           ferrodiazotrophum]
          Length = 457

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/347 (40%), Positives = 220/347 (63%), Gaps = 7/347 (2%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RISP   W GRV++ LG+P+DG   L  G + + +  +    + R+R+E+     +R I+
Sbjct: 106 RISPH--WLGRVLDPLGRPMDGR-PLPPGTVEVPLRGRPLNPLLRRRIERPLDLSVRSIN 162

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
               +  GQ+IG+FAG G+GKSTL+ M AR+   D  +I+L+GERGREVREF+E  LG +
Sbjct: 163 ALATVGEGQKIGIFAGPGVGKSTLMGMMARNASVDVNVIALIGERGREVREFLERDLGPE 222

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L ++V+VVAT +  P+L+  A   A+ IAE F  +G NVL ++DS+TR+A ++REI   
Sbjct: 223 GLSRTVLVVATGELPPLLKTRATHFAMAIAEMFRDRGQNVLFMMDSLTRYAGALREIGLA 282

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSI 331
           +GE P ARG+  SVF++LPRL+ER G +E   G+IT + +VLV+G++  +DP+++++ +I
Sbjct: 283 TGEPPSARGFTPSVFAQLPRLVERAGCAEG-PGSITGIYTVLVEGEDLPDDPLSEALTAI 341

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHI L+R+LA EG +P V+P+ S+SR+       D + L      L   +  + D+  
Sbjct: 342 LDGHIHLSRTLAHEGVFPAVEPMGSLSRVMADIVDEDRQVLAREWRRLYGLYRRSEDLIR 401

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437
           IG Y  G D  LD+AV     +  FL+Q   + +  E+ F+++ + L
Sbjct: 402 IGAYVAGGDPELDRAVRLHESMTGFLRQGREERVGLEEAFEDLARSL 448


>gi|332526226|ref|ZP_08402359.1| type III secretion system ATPase [Rubrivivax benzoatilyticus JA2]
 gi|332110064|gb|EGJ10692.1| type III secretion system ATPase [Rubrivivax benzoatilyticus JA2]
          Length = 442

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/365 (42%), Positives = 226/365 (61%), Gaps = 5/365 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ +      + P+G    ++LG ++     + R+       GRV++A G+P+DG  SL
Sbjct: 65  EVVGLADGCAMLAPLGELRGVALGAEVELLEQQARVPCGRGLLGRVLDAFGEPLDGR-SL 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G     + +  P  + R+ V++   TG+R ID+   +  GQR+GVFA +G GKSTLL+
Sbjct: 124 PPGLAGWPLRNASPNPLARRPVDQALATGVRAIDLALTVGVGQRVGVFAMAGGGKSTLLA 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +I+LVGERGREVREFI+D LG + L +SVVVVATSD   + R  A  TA
Sbjct: 184 MLARGAQADLNVIALVGERGREVREFIDDSLGAEGLARSVVVVATSDRPAMERARAAETA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE F + G +VLL++DS+TR+A ++REI  + GE  V RGYP SVF+ELPRL ER G
Sbjct: 244 TAIAEGFRAGGAHVLLMMDSVTRYARALREIGLSVGEPAVRRGYPPSVFAELPRLFERAG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G ITA  +VL + ++ +DP+A+ VRSILDGH+VL+R+L   G YP +D LAS S
Sbjct: 304 --HDAQGAITAFYTVLAEDEDGSDPVAEEVRSILDGHVVLSRALGAAGHYPAIDLLASAS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  +A  +     L  L+ R  E R +  +G Y+ G D + D+A+ ++P +   L+
Sbjct: 362 RVFPRVTAAAHQAAARELRALLARHAEIRFLLQVGEYQAGSDALADRAIERMPRLEALLR 421

Query: 419 QSPSD 423
           Q+P +
Sbjct: 422 QAPDE 426


>gi|116619484|ref|YP_821640.1| FliI/YscN family ATPase [Candidatus Solibacter usitatus Ellin6076]
 gi|116222646|gb|ABJ81355.1| ATPase, FliI/YscN family [Candidatus Solibacter usitatus Ellin6076]
          Length = 449

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/380 (39%), Positives = 216/380 (56%), Gaps = 6/380 (1%)

Query: 43  VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSAC 100
           V +GDF  V          QVI      V   P+   + + LGD L       R+     
Sbjct: 39  VAIGDFCEVKTASGRRIHTQVIGFRDGRVLSMPLEEIDGLQLGDPLAARSEDARVEVGPG 98

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+  GKP+D   ++   + S  +       ++RQ + +   TGIR ID   P   
Sbjct: 99  LLGRVIDGFGKPMDTGPAINARE-SYSLHGTPTNPLDRQHITQPLVTGIRAIDALLPCGK 157

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQRIG+F GSG+GKSTLL   +R++  D  +I+++GER REVR F+E+ LG +  K+SVV
Sbjct: 158 GQRIGIFGGSGVGKSTLLGSMSRNNSADVTVIAMIGERNREVRGFLENELGPEGRKRSVV 217

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATS+    LR  A   ++ IAEYF  +G NVLL++DS+TR A + REI   +GE P  
Sbjct: 218 VCATSERPAPLRVRACFVSLAIAEYFRDQGANVLLVMDSVTRLAMAQREIGLAAGEPPSQ 277

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GY  SVF+ LP++LER G     +G+IT   +VLV+GD+ N+PI D+VR ILDGH +L+
Sbjct: 278 KGYTPSVFNLLPKVLERAG--NFGRGSITGFFTVLVEGDDFNEPICDAVRGILDGHFILS 335

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R L  +G YP +D L SVSRL     +  +K+    +   +  + +  D+  +G Y  G 
Sbjct: 336 RDLGAQGHYPAIDILHSVSRLTSAIATPAQKEAARKIRAALAAYRDAEDLIQLGAYVSGS 395

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +  LD ++H  P + DFL+Q
Sbjct: 396 NPDLDASIHLRPELLDFLRQ 415


>gi|311086391|gb|ADP66472.1| flagellum-specific ATP synthase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311086971|gb|ADP67051.1| flagellum-specific ATP synthase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087547|gb|ADP67626.1| flagellum-specific ATP synthase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 463

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+D    +     S      + P +NR  + +   TGIR I+    +  G
Sbjct: 126 LGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINP-LNRTPITEVLDTGIRAINGLLTIGRG 184

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           Q+IG+F+ SGIGKS LL M AR    D ++I+L+GERGREV++FIE+ LG   L +SV++
Sbjct: 185 QKIGIFSSSGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVII 244

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+L+  A   A  IAEYF     +VLLI+DS+TR+A + REI+ + GELPV++
Sbjct: 245 AAPADVSPLLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSK 304

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP+S+FS++P L+ER G   K KG+IT+  +VL +G++  DP++   RS+LDGHI+L+R
Sbjct: 305 GYPSSIFSKIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSR 364

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
             A+ G YP +D  +S+SR+     +A +         L+  ++  RD+  IG Y  G D
Sbjct: 365 YYADLGHYPAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTD 424

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLS 425
           +ILD A+   P +  FL+Q  S+ S
Sbjct: 425 VILDHAIKIWPKLEKFLQQEISEKS 449


>gi|257471130|ref|ZP_05635129.1| flagellum-specific ATP synthase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|311085818|gb|ADP65900.1| flagellum-specific ATP synthase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 453

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+D    +     S      + P +NR  + +   TGIR I+    +  G
Sbjct: 116 LGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINP-LNRTPITEVLDTGIRAINGLLTIGRG 174

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           Q+IG+F+ SGIGKS LL M AR    D ++I+L+GERGREV++FIE+ LG   L +SV++
Sbjct: 175 QKIGIFSSSGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVII 234

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+L+  A   A  IAEYF     +VLLI+DS+TR+A + REI+ + GELPV++
Sbjct: 235 AAPADVSPLLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSK 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP+S+FS++P L+ER G   K KG+IT+  +VL +G++  DP++   RS+LDGHI+L+R
Sbjct: 295 GYPSSIFSKIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSR 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
             A+ G YP +D  +S+SR+     +A +         L+  ++  RD+  IG Y  G D
Sbjct: 355 YYADLGHYPAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLS 425
           +ILD A+   P +  FL+Q  S+ S
Sbjct: 415 VILDHAIKIWPKLEKFLQQEISEKS 439


>gi|74317109|ref|YP_314849.1| flagella ATPase FliI [Thiobacillus denitrificans ATCC 25259]
 gi|74056604|gb|AAZ97044.1| flagella ATPase FliI [Thiobacillus denitrificans ATCC 25259]
          Length = 464

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 208/338 (61%), Gaps = 10/338 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GRV++  G+P+DG      G LS+E    + S+    + R  + +    G+R I+  
Sbjct: 125 SLLGRVLDGAGRPLDG-----IGPLSLERRVPLYSRPINPLERAPIRETLDVGVRAINGL 179

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNL 214
             +  GQR+G+FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI+  LG + +
Sbjct: 180 LTVGRGQRLGLFAGSGVGKSVLLGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGM 239

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            ++VVV A +D  P++R      A++IAEYF  +G +VLLI+DS+TR+A + RE+A   G
Sbjct: 240 ARAVVVAAPADHPPLMRLNGAAYAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIG 299

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  +GYP SVF++LP+L ER G      G+ITA  +VL++GD+  DPIAD+ R+ILDG
Sbjct: 300 EPPATKGYPPSVFAKLPQLAERAGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDG 359

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+R LA+ G YP +D  AS+SR      + +  +      +L  R+  +RD+  +G 
Sbjct: 360 HIVLSRDLADAGHYPAIDIEASISRAQPDLLTEEALERTRRFKYLYSRYMRSRDLLAVGA 419

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           Y PG D++LD+ V   P +  +L Q   + +S D  ++
Sbjct: 420 YVPGADVVLDEGVRLYPRMQGYLMQGMREQASLDAARD 457


>gi|15616698|ref|NP_239910.1| flagellum-specific ATP synthase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681455|ref|YP_002467840.1| flagellum-specific ATP synthase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682011|ref|YP_002468395.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|11386785|sp|P57178|FLII_BUCAI RecName: Full=Flagellum-specific ATP synthase
 gi|25290463|pir||D84938 H+-transporting two-sector ATPase (EC 3.6.3.14), flagellum-specific
           [imported] - Buchnera sp. (strain APS)
 gi|10038761|dbj|BAB12796.1| flagellum-specific ATP synthase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621744|gb|ACL29900.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624298|gb|ACL30453.1| flagellum-specific ATP synthase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 467

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+D    +     S      + P +NR  + +   TGIR I+    +  G
Sbjct: 130 LGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINP-LNRTPITEVLDTGIRAINGLLTIGRG 188

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           Q+IG+F+ SGIGKS LL M AR    D ++I+L+GERGREV++FIE+ LG   L +SV++
Sbjct: 189 QKIGIFSSSGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVII 248

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+L+  A   A  IAEYF     +VLLI+DS+TR+A + REI+ + GELPV++
Sbjct: 249 AAPADVSPLLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSK 308

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP+S+FS++P L+ER G   K KG+IT+  +VL +G++  DP++   RS+LDGHI+L+R
Sbjct: 309 GYPSSIFSKIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSR 368

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
             A+ G YP +D  +S+SR+     +A +         L+  ++  RD+  IG Y  G D
Sbjct: 369 YYADLGHYPAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLS 425
           +ILD A+   P +  FL+Q  S+ S
Sbjct: 429 VILDHAIKIWPKLEKFLQQEISEKS 453


>gi|76574801|gb|ABA47275.1| HrcN [Pseudomonas cichorii]
          Length = 451

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 10/340 (2%)

Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G V++  G+ + GD     +L     +  ++   PPA  R R+E    TG+R ID    L
Sbjct: 108 GSVLDGFGRSLSGDGPSAFALSGAAGAQPVIRDAPPATERPRIEAPLSTGLRAIDGLLTL 167

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAG+G GK+TLL+  AR+   + ++  L+GERGRE+REF++  L + L+ ++
Sbjct: 168 GEGQRVGLFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRSRT 227

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V+V +TSD S + R  A  TA TIAE F  +G + LLI+DS+TRFA + REI   SGE P
Sbjct: 228 VLVCSTSDRSSMERARAAFTATTIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286

Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RG  P SV+S LPRL+ER G      G ITA+ SVL++ D+ NDP+AD VRS+LDGHI
Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTRTGAITALYSVLIEQDSMNDPVADEVRSLLDGHI 344

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP VD L S+SR        ++ K  + +  L+  +++   +  +G Y+
Sbjct: 345 VLSRRLAERGHYPAVDILTSLSRTMSNVVGTEQVKGATQIRRLLAAYQQVEMLIKLGEYQ 404

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435
            G D + D AV     I DFL+QS  D +S ED    + +
Sbjct: 405 QGNDPLTDFAVQSRDQIMDFLQQSLRDPVSLEDTLDHLIQ 444


>gi|323698505|ref|ZP_08110417.1| ATPase, FliI/YscN family [Desulfovibrio sp. ND132]
 gi|323458437|gb|EGB14302.1| ATPase, FliI/YscN family [Desulfovibrio desulfuricans ND132]
          Length = 474

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/325 (44%), Positives = 202/325 (62%), Gaps = 12/325 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIF 155
              GR ++A G P+DG     KG +  +  + +    P  + R R+ +    GIR ++  
Sbjct: 96  ALLGRAVDAFGAPLDG-----KGPIHAQTFAPLHREPPNPLERPRINQPLDVGIRSVNAL 150

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNL 214
             L  GQR+G+ AGSG+GKST L M AR    D  +I+LVGERGREV EF+E  LG + +
Sbjct: 151 LTLGKGQRVGIMAGSGVGKSTTLGMMARYTKADVNVIALVGERGREVVEFMERDLGPEGM 210

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            +SV+VVATSD+SP++R  A   A  +AEYF  +G +VLL++DS+TRFA + RE+   +G
Sbjct: 211 ARSVLVVATSDKSPLIRMRAAYAATAVAEYFRDQGKDVLLMMDSVTRFAMAGREVGLAAG 270

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P   GY  SVF+ LP+LLER G  +  KG+IT V +VLVDGD+  +PIADS RSILDG
Sbjct: 271 EPPTRGGYTPSVFAHLPQLLERAG--KNRKGSITGVYTVLVDGDDFTEPIADSTRSILDG 328

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL R LA+ G YP +D L S+SRL     + + +    +L   +  F+   D+  IG 
Sbjct: 329 HIVLTRELADLGHYPAIDVLRSISRLRSDITTKEAQADGRALLRHMATFKRVEDMVNIGA 388

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y+ G +  +DKA++ V  I  FL+Q
Sbjct: 389 YQKGANPEVDKAINMVGPINRFLRQ 413


>gi|94987296|ref|YP_595229.1| flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731545|emb|CAJ54908.1| Flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 439

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 144/331 (43%), Positives = 207/331 (62%), Gaps = 5/331 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G   NA G+P+ G + +    L + + S  P  + R R++     G+R I+    L  GQ
Sbjct: 104 GHAFNAFGEPLSGGNPIIPEKL-IPLYSNPPSPLERPRIKDPLDVGVRAINSMITLGKGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+ AGSG+GKSTL+ M AR    D  +I L+GERGREV EF+E  LG + + +SV+++
Sbjct: 163 RVGIMAGSGVGKSTLMGMMARYTSADVNVIGLIGERGREVVEFMEKELGPEGMTRSVLII 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+SP++R  A   A  +AEYF  +G +VLL++DS+TRFA + REI    GE P  +G
Sbjct: 223 ATSDQSPLVRMRAAYAATAVAEYFRDQGKDVLLMMDSVTRFAMAAREIGLAVGEPPTTKG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  +VF++LP+LLER G S    G IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R 
Sbjct: 283 YTPTVFAQLPKLLERTGRS--NTGTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRD 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA++  +P +D L S+SRL     + ++ +    +   +  F +  D+  IG Y  G + 
Sbjct: 341 LADQDHFPAIDVLRSISRLRSDICTPEQVQDGRIVGRYMATFRKAEDMINIGAYIQGSNE 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQ 431
            +DKA+     I  FLKQ+ SD S+ ED F+
Sbjct: 401 EIDKAITMHGPIESFLKQNISDRSTLEDSFR 431


>gi|182440967|dbj|BAG24092.1| HrcN [Pseudomonas cichorii]
          Length = 424

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 10/340 (2%)

Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G V++  G+ + GD     +L     +  ++   PPA  R R+E    TG+R ID    L
Sbjct: 81  GSVLDGFGRSLSGDGPSAFALSGAAGAQPVIRDAPPATERPRIEAPLSTGLRAIDGLLTL 140

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAG+G GK+TLL+  AR+   + ++  L+GERGRE+REF++  L + L+ ++
Sbjct: 141 GEGQRVGLFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRSRT 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V+V +TSD S + R  A  TA TIAE F  +G + LLI+DS+TRFA + REI   SGE P
Sbjct: 201 VLVCSTSDRSSMERARAAFTATTIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 259

Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RG  P SV+S LPRL+ER G      G ITA+ SVL++ D+ NDP+AD VRS+LDGHI
Sbjct: 260 AGRGGLPPSVYSLLPRLVERAG--RTRTGAITALYSVLIEQDSMNDPVADEVRSLLDGHI 317

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP VD L S+SR        ++ K  + +  L+  +++   +  +G Y+
Sbjct: 318 VLSRRLAERGHYPAVDILTSLSRTMSNVVGTEQVKGATQIRRLLAAYQQVEMLIKLGEYQ 377

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435
            G D + D AV     I DFL+QS  D +S ED    + +
Sbjct: 378 QGNDPLTDFAVQSRDQIMDFLQQSLRDPVSLEDTLDHLIQ 417


>gi|238757861|ref|ZP_04619043.1| secretion system apparatus ATP synthase ssaN [Yersinia aldovae ATCC
           35236]
 gi|238703846|gb|EEP96381.1| secretion system apparatus ATP synthase ssaN [Yersinia aldovae ATCC
           35236]
          Length = 409

 Score =  253 bits (645), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 143/330 (43%), Positives = 202/330 (61%), Gaps = 5/330 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R R+       GRVI+ +G+ +D    L +G    +  +  P  + RQ +E+   TGIR 
Sbjct: 64  RHRVPVGQDLLGRVIDGMGQALDRGPEL-QGPWR-DYDAPPPSPLTRQLIERPMLTGIRA 121

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           ID       GQRIG+FA +G+GKSTLLSM  RS   +  ++ L+GERGREVREFIE  LG
Sbjct: 122 IDSLLTCGEGQRIGIFAAAGVGKSTLLSMLCRSPDSEINVLVLIGERGREVREFIEQTLG 181

Query: 212 DNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           + +++  V+V ++ + P L +M  L  A TIAE F  +G  VLL  DS+TR+A + REIA
Sbjct: 182 EEVRRRCVIVVSTADRPALERMRALFVATTIAEAFRDQGKRVLLFADSLTRYARAAREIA 241

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             SGE+ V   YP  VF+ LPRLLER G  + E+G+ITA  +VLV+GD+ N+P+AD VRS
Sbjct: 242 LASGEVAVPGSYPPCVFAALPRLLERAG--KGERGSITAFYTVLVEGDDMNEPLADEVRS 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           +LDGHIVL+R LAE   +P +D LAS+SR+     SA+ +   ++L   +  + +   + 
Sbjct: 300 LLDGHIVLSRRLAESAHFPAIDVLASLSRIMPMVTSAEHRAQANALRSQLSVYRDVELLV 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +G ++ G D   D AV   P I  FL+Q 
Sbjct: 360 RVGEFKRGEDSQADHAVDSYPAICHFLQQQ 389


>gi|329902175|ref|ZP_08273064.1| Type III secretion cytoplasmic ATP synthase [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548846|gb|EGF33475.1| Type III secretion cytoplasmic ATP synthase [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 460

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 133/315 (42%), Positives = 198/315 (62%), Gaps = 6/315 (1%)

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +++ ++   P A +R R+     TG+R ID    +  GQRIGVFAG G GK+TL++  AR
Sbjct: 146 VTVPVIRDAPKATDRPRITTVLPTGVRAIDGMLTMGRGQRIGVFAGPGCGKTTLMASIAR 205

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +I  L+GERGRE+ EF++  L D L +K+++V ATSD + + R  A  +A  IA
Sbjct: 206 GCAADVIIFGLIGERGRELNEFLQHELDDELVRKTIIVCATSDRTSMERSRAAFSATAIA 265

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F ++G NVLL++DS+TRFA + REI   +GE P   G+  SV++ LPRL+ER G + +
Sbjct: 266 EAFRARGKNVLLLIDSLTRFARAQREIGLAAGEPPARGGFTPSVYTMLPRLIERAGSTTE 325

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA+ +VLVDG+  +DPI D  RS+LDGHIVL + LAE+G YP +D LAS+SR+  
Sbjct: 326 --GSITAMYTVLVDGETTSDPIGDEARSLLDGHIVLTKKLAEQGHYPAIDVLASISRVMS 383

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              ++ ++K  S    L+ R++E   +  +G Y+PG D + D AV   P    FL+Q   
Sbjct: 384 NVATSAQRKSASRFRELMARYDEMELLIRLGEYKPGGDPVADVAVRLRPEQLKFLRQDTR 443

Query: 423 DLSSEDVFQEITKKL 437
            L+    F ++ ++L
Sbjct: 444 HLTP---FDQMLRQL 455


>gi|160896090|ref|YP_001561672.1| flagellar protein export ATPase FliI [Delftia acidovorans SPH-1]
 gi|160361674|gb|ABX33287.1| flagellar protein export ATPase FliI [Delftia acidovorans SPH-1]
          Length = 480

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 241/428 (56%), Gaps = 26/428 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +T +    T L   V    ++  QG++   L +V+    +  ++ P G  + +S 
Sbjct: 43  GTLTRLTGLVLEATGLQVPVGSQCWIRQQGQDP-VLAEVVGFAGERAFLMPAGDIQGLSS 101

Query: 84  GDLV---------------------FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           G +V                        G  R+   +   GRV+++ G+P+D    L   
Sbjct: 102 GAIVTPAEPFVAPLRFGDGVEPPVSLAAGVLRLPIGSGLLGRVVDSQGQPLDHGGPLA-- 159

Query: 123 DLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           D+S +++ + P  AM+R  V +   TG+R ++    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 160 DVSADLLDRNPINAMDRDPVRETLDTGVRSLNALLTVGRGQRLGLFAGSGVGKSVLLGMM 219

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D +++ L+GERGREV+EF+ED LG  +  ++VVV A +D  P+LR      A  
Sbjct: 220 ARYTQADVIVVGLIGERGREVKEFVEDILGAQDRSRAVVVAAPADAPPLLRMQGAAYATA 279

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G  
Sbjct: 280 IAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSGNG 339

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE G YP +D   S SR+
Sbjct: 340 LNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHVVLSRALAESGHYPAIDIEQSASRV 399

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +L      +  R+++ RD+  +G Y  G D  +D+A+   P +  FL+QS
Sbjct: 400 MHNVVSREHFELARRFRAVYSRYQKGRDLVQVGAYMAGSDPQMDEAIRLQPAMAAFLQQS 459

Query: 421 PSDLSSED 428
             + +S D
Sbjct: 460 MFESASMD 467


>gi|90579930|ref|ZP_01235738.1| flagellum-specific ATP synthase [Vibrio angustum S14]
 gi|90438815|gb|EAS63998.1| flagellum-specific ATP synthase [Vibrio angustum S14]
          Length = 440

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 136/334 (40%), Positives = 206/334 (61%), Gaps = 4/334 (1%)

Query: 87  VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
           + H     + P     GRVI+ +G P+DG   +     +    + + P + R+ +++   
Sbjct: 89  ILHNSGLPVGPE--LLGRVIDGVGNPLDGLGPIFTEHRASFNATPINP-LARKPIKEPLD 145

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
            GI+ I+    +  GQRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFI
Sbjct: 146 VGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTSAQIVVVGLIGERGREVKEFI 205

Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E+ LG +   +SVVV A +D SP++R     T++TIAEYF  +G +VLL++DS+TRFA +
Sbjct: 206 EESLGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAEYFRDQGFDVLLLMDSLTRFAQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            REIA + GE P  +GYP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIA
Sbjct: 266 QREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLSEGDDLQDPIA 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+ R+ILDGHIVL+R +A+ G YP +D   SVSR+     S +   +  ++  ++    +
Sbjct: 326 DASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAIVSEEHMLMSKAVRQILSICRK 385

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +D+  IG Y+PG D  +D+A    P +  +L+Q
Sbjct: 386 NQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQ 419


>gi|251789185|ref|YP_003003906.1| flagellum-specific ATP synthase [Dickeya zeae Ech1591]
 gi|247537806|gb|ACT06427.1| ATPase, FliI/YscN family [Dickeya zeae Ech1591]
          Length = 456

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 197/330 (59%), Gaps = 2/330 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++   KP+DG  +   G  +    +   P + R  +E     G+R I+    + 
Sbjct: 114 ALLGRVLDGSAKPLDGLPAPETGYRASLATAPFNP-LQRTPIEHVLDVGVRAINALLTVG 172

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SV
Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPA 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR        +    V      +  ++  RD+  +G Y  G
Sbjct: 353 SRQLAESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAG 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            D +LD+A+   P +  FL+Q   + SS D
Sbjct: 413 SDPMLDRAIQLYPHMQHFLQQGMFERSSFD 442


>gi|229528858|ref|ZP_04418248.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 12129(1)]
 gi|229332632|gb|EEN98118.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 12129(1)]
          Length = 439

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 204/321 (63%), Gaps = 6/321 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRVI+ +G P+DG   +      S+  M   P  + R+ + +    GI+ I+    +  G
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV
Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +
Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399
            +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+ G 
Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKLGT 398

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D  +D A    P +  +L+Q+
Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419


>gi|46578726|ref|YP_009534.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603710|ref|YP_968110.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris DP4]
 gi|46448138|gb|AAS94793.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563939|gb|ABM29683.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio vulgaris
           DP4]
 gi|311232598|gb|ADP85452.1| ATPase, FliI/YscN family [Desulfovibrio vulgaris RCH1]
          Length = 437

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 143/322 (44%), Positives = 199/322 (61%), Gaps = 4/322 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR  +A G P+DG   +   +    + +  P  + R R++     G+R I+    L  GQ
Sbjct: 102 GRAFDAFGAPLDGGTPV-MPEAWAPLYASPPNPLTRPRIDTPLDVGVRCINSLLTLGRGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+ AGSG+GKSTL+ M AR       +I L+GERGREV EF+E  LG + + +SV+VV
Sbjct: 161 RVGIMAGSGVGKSTLMGMMARYTEAQVNVIGLIGERGREVVEFMEKDLGPEGMARSVLVV 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+SP++R  A   A  +AE+F  +G +VLL++DS+TRFA + RE+    GE P  +G
Sbjct: 221 ATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  +VF++LPRLLER G S +  G IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R 
Sbjct: 281 YTPTVFAQLPRLLERAGRSPE--GTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRE 338

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA++G +P +D L S+SRL       D       LT  +  F    D+  IG Y  G + 
Sbjct: 339 LADQGHFPAIDVLKSISRLRTDICPDDIVNAGRILTRHMATFRRVEDMINIGAYATGSNP 398

Query: 402 ILDKAVHQVPIIYDFLKQSPSD 423
            +DKA+  V  I DFL+Q  +D
Sbjct: 399 DIDKAIAMVGPINDFLRQHITD 420


>gi|110632469|ref|YP_672677.1| FliI/YscN family ATPase [Mesorhizobium sp. BNC1]
 gi|110283453|gb|ABG61512.1| type III secretion system ATPase, FliI/YscN [Chelativorans sp.
           BNC1]
          Length = 429

 Score =  252 bits (644), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 161/398 (40%), Positives = 227/398 (57%), Gaps = 9/398 (2%)

Query: 44  CLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACW 101
           C+G+       N D  L +V+  +     + P G    IS    +      F +      
Sbjct: 32  CVGEICAVSRSNGDPILAEVVGFDQGEAILTPYGGTAGISHNSTIEPLMSTFEVPVGEEL 91

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRVI+A+GKPID   S+             P  M R  +++ F  G+RV+D       G
Sbjct: 92  TGRVIDAMGKPIDAGPSVTSCAF-YPGHRTAPNPMLRPTIDRPFILGVRVLDGALTCGEG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FA +G GKSTL+S+  R   +D+ +I+L+GERGREVREF+E  LG   L KS+VV
Sbjct: 151 QRMGIFAAAGGGKSTLVSLMVRFAEYDRCVIALIGERGREVREFLEHQLGPTGLAKSIVV 210

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           VATSD   I +  A  TA  +AE+   +G+ VLLI+DS+TRFA + R+I   +GE P  R
Sbjct: 211 VATSDRPAIEQVKAAYTATALAEFHRDRGERVLLIMDSLTRFARAQRQIGLAAGEPPTRR 270

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           G+P SVF  LP L+ER G S    G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R
Sbjct: 271 GFPPSVFELLPGLVERAGLSGD--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSR 328

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YPPVD + S SR+  +  S D  + V     L+ + +E   +  IG Y  G D
Sbjct: 329 KLAEAGHYPPVDVITSTSRILSRIVSPDHLEAVHKARGLMSKLQEIELLLKIGEYSKGAD 388

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            + D+A+ +   +  FL+Q  ++ SS   F+E    L+
Sbjct: 389 ALADEALARRTALDAFLRQGVNEFSS---FEETVIALK 423


>gi|220904836|ref|YP_002480148.1| ATPase FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans
           str. ATCC 27774]
 gi|219869135|gb|ACL49470.1| ATPase FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans
           str. ATCC 27774]
          Length = 504

 Score =  252 bits (644), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 135/299 (45%), Positives = 194/299 (64%), Gaps = 7/299 (2%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  P  + R R+      G+R ++    L  GQR+G+ AGSG+GKSTL+ M AR    
Sbjct: 166 IYADPPSPLQRPRITDILDVGVRSVNSLLTLGKGQRVGIMAGSGVGKSTLMGMMARYTRA 225

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREV EF+E  LG + + +SV+V+ATSD+SP++R  A   A  +AEYF 
Sbjct: 226 DVNVIALIGERGREVVEFMERDLGPEGMARSVLVIATSDQSPLVRMRAAYAATGVAEYFR 285

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG +VLL++DS+TRFA + RE+    GE P  +GY  +VF++LP+LLER G S   +G 
Sbjct: 286 DKGMDVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPTVFAQLPKLLERAGRS--ARGT 343

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R LA++G +P +D L S+SRL  ++  
Sbjct: 344 ITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRDLADQGHFPAIDVLRSISRL--RSDI 401

Query: 367 ADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            D + ++S   +T  +  F +  D+  IG Y  G +  +D A+  +P I  FL+Q   D
Sbjct: 402 CDRQDVLSGRVVTRNMSTFRKVEDMVNIGAYAKGTNAEIDAAIESMPAINSFLRQDVGD 460


>gi|317153721|ref|YP_004121769.1| FliI/YscN family ATPase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943972|gb|ADU63023.1| ATPase, FliI/YscN family [Desulfovibrio aespoeensis Aspo-2]
          Length = 475

 Score =  252 bits (644), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 144/323 (44%), Positives = 200/323 (61%), Gaps = 4/323 (1%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           +    GR ++  G P+DG   +   D  + +  + P  + R R+ +    GIR ++    
Sbjct: 94  AKAMLGRALDCFGTPMDGKGPITP-DAFVPLHREPPNPLERPRINEPLDVGIRSVNALLT 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           L  GQR+G+ AGSG+GKST L M AR    D  +I+LVGERGREV EF+E  LG + + +
Sbjct: 153 LGKGQRVGIMAGSGVGKSTTLGMMARYTKADINVIALVGERGREVVEFMERDLGPEGMAR 212

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SV+VVATSD+SP++R  A   A  +AEYF  +G +VLL++DS+TRFA + RE+   +GE 
Sbjct: 213 SVLVVATSDKSPLIRMRAAYAATAVAEYFRDQGKDVLLMMDSVTRFAMAGREVGLAAGEP 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  SVF+ LP+LLER G S   KG+IT + +VLVDGD+  +PIADS RSILDGHI
Sbjct: 273 PTRGGYTPSVFAHLPQLLERAGKS--AKGSITGIYTVLVDGDDFTEPIADSTRSILDGHI 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL R LA+ G YP +D L SVSRL     +   +    +L   +  F+   D+  IG Y+
Sbjct: 331 VLTRELADLGHYPAIDVLRSVSRLRGDITTNQAQADGQALLRHMATFKRVEDMVNIGAYQ 390

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G ++ +DKA+  V  I  FL+Q
Sbjct: 391 KGANVEVDKAIAMVAPINGFLRQ 413


>gi|1071643|gb|AAA82637.1| ATPase [Escherichia coli]
          Length = 457

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 192/321 (59%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGS +GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSAVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A  D SP+LR   P  A  IAE F  +G +VLLI+DS+TR+  + REIA   GE P 
Sbjct: 234 VIAAPRDVSPLLRMRMPAYATRIAEDFRDRGQHVLLIMDSLTRYGMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      S      V +   L+  F   RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFHGNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|171321204|ref|ZP_02910174.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171093514|gb|EDT38684.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 443

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/378 (37%), Positives = 222/378 (58%), Gaps = 4/378 (1%)

Query: 45  LGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102
           LG      G+ S+  L +++ +    V + P      I +GD V         P    + 
Sbjct: 44  LGSLCAIGGEQSEPTLAEIVNVERTRVTLAPYSTASAIRIGDEVAALQADATIPVGDAYL 103

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P+DG  +LG    +  +     P + RQ  E   +TG+R +D    L  GQ
Sbjct: 104 GRVVDPLGRPLDGAGALGHCVANWPLAGIATPPLERQSPEHVLETGVRALDALLTLGVGQ 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+FAGSG+GK+TLL   AR    D  ++ LVGERGREV E     L   +  ++ +VV
Sbjct: 164 RVGLFAGSGVGKTTLLGALARDVYADVRVLCLVGERGREVEECWNRTLSAASRARTTLVV 223

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+S  LR  +   A++IAEYF S+G +VLL++DS+TR+A ++REI   +GE P  R 
Sbjct: 224 ATSDQSAALRARSVPAALSIAEYFRSQGAHVLLMIDSVTRYALALREIGLAAGEPPTVRA 283

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y   VF+ LP+++ER G + K  G ITA+++VL + D+ +DP+A+++RS+LDGHIVL+R+
Sbjct: 284 YTPGVFAALPKIVERCG-ALKSGGAITALMTVLTESDDIDDPMAETMRSLLDGHIVLSRA 342

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE+G++PP+    SVSR++    +  E+ L +     +  ++ ++ +   G Y  G   
Sbjct: 343 LAEQGQFPPIQVPKSVSRVSRYVANDAERALAADAIAQLALYDASKTLVESGLYTAGSHP 402

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            LD+A+   P +  FL+Q
Sbjct: 403 ALDRALRLRPALLSFLRQ 420


>gi|333003037|gb|EGK22591.1| flagellar protein export ATPase FliI [Shigella flexneri VA-6]
          Length = 457

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 144/326 (44%), Positives = 196/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +  +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRSQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|89075516|ref|ZP_01161927.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34]
 gi|89048788|gb|EAR54359.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34]
          Length = 440

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/334 (40%), Positives = 206/334 (61%), Gaps = 4/334 (1%)

Query: 87  VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
           + H     + P     GRVI+ +G P+DG   +     +    + + P + R+ +++   
Sbjct: 89  ILHNSGLPVGPE--LLGRVIDGVGNPLDGLGPIFTEHRASFNATPINP-LARKPIKEPLD 145

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
            GI+ I+    +  GQRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFI
Sbjct: 146 VGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTNAQIVVVGLIGERGREVKEFI 205

Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E+ LG +   +SVVV A +D SP++R     T++TIAEYF  +G +VLL++DS+TRFA +
Sbjct: 206 EESLGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAEYFRDQGFDVLLLMDSLTRFAQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            REIA + GE P  +GYP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIA
Sbjct: 266 QREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLSEGDDLQDPIA 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+ R+ILDGHIVL+R +A+ G YP +D   SVSR+     S +   +  ++  ++    +
Sbjct: 326 DASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAIVSEEHMLMSKAVRQILSICRK 385

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +D+  IG Y+PG D  +D+A    P +  +L+Q
Sbjct: 386 NQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQ 419


>gi|282890881|ref|ZP_06299398.1| type III secretion cytoplasmic ATPase SctN [Parachlamydia
           acanthamoebae str. Hall's coccus]
 gi|281499235|gb|EFB41537.1| type III secretion cytoplasmic ATPase SctN [Parachlamydia
           acanthamoebae str. Hall's coccus]
          Length = 438

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/419 (37%), Positives = 239/419 (57%), Gaps = 24/419 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG----IG--EEISLG 84
           +V   +  +   V +G+  + + +    L +V+    + V++ P+G    IG   E+   
Sbjct: 29  TVGMLIKAIVPQVKIGEVCLVKREGEPLLTEVVGFTREEVFLSPLGEMTGIGPSSEVIPT 88

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQR 140
            L  H    ++ P     GRV+N LG+P+D      KG L +     ++   P  + R+R
Sbjct: 89  RLPLH---IKVGPQ--LLGRVLNGLGEPLD---VATKGPLELNEVYPVIQAPPDPLKRKR 140

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + +    GIR ID       GQR+G+FA +G GKST L M AR+   D  +ISL+GERGR
Sbjct: 141 IVEPISVGIRAIDGVLTTGLGQRVGIFAAAGGGKSTTLGMIARNAMADVNVISLIGERGR 200

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           E+R+FIE  LG + LK+SV+VV+TSD++  LR  A      IAEYF  +G +V+L++DS+
Sbjct: 201 ELRDFIEKDLGPEGLKRSVLVVSTSDQASQLRLNAAYVGTAIAEYFRDQGKSVILMMDSV 260

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA ++RE+   +GE P   GY  SVFS LP+LLER G S  + G+ITA  ++LV GD+
Sbjct: 261 TRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERTGNS--DVGSITAFYTILVAGDD 318

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+P+AD VRSILDGHI+L+  LA +  YP +D L+S SR+       +  +LV  L  +
Sbjct: 319 MNEPVADEVRSILDGHIILSSELARQYHYPAIDVLSSASRVMPSIVPKEHLQLVGKLKEV 378

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  +++   +  IG Y+ G D   D A+  +  +  FLKQ   +  S   +QE  + L+
Sbjct: 379 LANYKKNELLIKIGEYKRGADKAGDFAIDHIDKVNKFLKQGVDEKCS---YQETMQLLR 434


>gi|332994118|gb|AEF04173.1| flagellum-specific ATP synthase [Alteromonas sp. SN2]
          Length = 444

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/408 (37%), Positives = 229/408 (56%), Gaps = 10/408 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S  +V  G  +  I      V C    + +G   + Q    +   +V+    DI Y+ P 
Sbjct: 18  SPPIVAAGKLVRGIGLTLEAVGC---QLPVGSQCLVQTIEGEIEAEVVGFGADITYLMPT 74

Query: 76  GIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                I  G  V    R   ++      GRV++  G P+DG   LG+      + +  PP
Sbjct: 75  EAVRGIVPGSRVMPLNRQSGLAVGMGLLGRVVDGNGNPLDG---LGEIKTETRVPTTRPP 131

Query: 135 --AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
              + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++
Sbjct: 132 INPLIRRAITQPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTRGCEADVVVV 191

Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVAT-SDESPILRKMAPLTAVTIAEYFSSKGDN 251
            LVGERGREV+EFI D L +  +   VVVA  +D SP++R     TAVTIAEYF  +G  
Sbjct: 192 GLVGERGREVKEFIHDILTEEERARAVVVAAPADTSPLMRLKGCETAVTIAEYFRDQGLK 251

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G   +++G+ITA  
Sbjct: 252 VLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSEKQGSITAFY 311

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL +GD+  DPIAD+ R+ILDGH+VL+R+LA+ G YP +D  AS+SR+     S + ++
Sbjct: 312 TVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMPMVVSDEHQQ 371

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   +  +   +++ +D+  IG Y  G D  +D A+   P I  FL+Q
Sbjct: 372 MARRVRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINAFLQQ 419


>gi|301168110|emb|CBW27696.1| putative flagellum-specific ATP synthase [Bacteriovorax marinus SJ]
          Length = 457

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/384 (39%), Positives = 225/384 (58%), Gaps = 23/384 (5%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPV----GIGEE--ISLGDLVFHWGRFRISPSAC 100
           +FV   G+    LG+V+ IN       P     GI  E  + L DL        I  S  
Sbjct: 52  EFVTEFGERC--LGEVVAINGHKCMAMPYDEISGINSETKVYLKDLTT-----TIKLSKN 104

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+  G PIDG   +   + S  I       + R  +++    G+  ++ F     
Sbjct: 105 MLGRVIDFQGNPIDGKGPITDIEESRSIYGTALNPLERPPIKEPLDVGVHAVNCFMTAGK 164

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+ + AGSG+GKS  L M A++   D  +I+L+GERGREV EFIE  LG + +K+SVV
Sbjct: 165 GQRMAIMAGSGVGKSVTLGMIAQNSSADVNVIALIGERGREVLEFIESDLGPEGIKRSVV 224

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +VATSD SP++R  A   A TI+E+F     +VLL++DSITRFA + REI+ ++GE P  
Sbjct: 225 IVATSDTSPLIRMKAAYVATTISEFFRDDNKDVLLMMDSITRFAMANREISLSAGEPPGQ 284

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GY  SVF++LP+L+ER G ++   G IT + +VLV+G + ++PIAD+VR+I DGHIVL+
Sbjct: 285 KGYTPSVFAQLPKLMERAG-TKSNSGTITGIYTVLVEGGDMDEPIADAVRAIADGHIVLS 343

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA   ++P +D L S+SR+ +K  + + K + S L  L+  ++E  D+  +G Y  G 
Sbjct: 344 RELASRNQFPAIDVLQSLSRVMNKVTTNEHKIVASHLRDLLSAYKENEDLINVGAYARGS 403

Query: 400 DLILDKAVHQVPIIYD----FLKQ 419
           +  +DKA+    +IYD     LKQ
Sbjct: 404 NPKVDKAL----VIYDDLMALLKQ 423


>gi|329889302|ref|ZP_08267645.1| putative ATP synthase hrpB6 [Brevundimonas diminuta ATCC 11568]
 gi|328844603|gb|EGF94167.1| putative ATP synthase hrpB6 [Brevundimonas diminuta ATCC 11568]
          Length = 383

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/329 (42%), Positives = 201/329 (61%), Gaps = 3/329 (0%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R  +       GRVI+A G+P+DG   +       ++ +  P  + R  +   F TG+R 
Sbjct: 37  RTEVPSGPGLLGRVIDAFGRPLDGLGPIAGPVALRDVYADAPNPLARPPISALFPTGVRA 96

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
           +D    +  GQR+GVFA +G GKSTL+ MFAR    D  +I+L+GERGREVREF++D LG
Sbjct: 97  VDTLLSVGVGQRVGVFAMAGGGKSTLMGMFARHCAADVNVIALIGERGREVREFLDDSLG 156

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            + L +SVVVVATSD   + R  A   A  IAE F ++G  V+L +DS+TRFA ++REI 
Sbjct: 157 PEGLARSVVVVATSDRPAMERVRAAHAATAIAEGFRAQGLRVMLQMDSVTRFARALREIG 216

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
            + GE  V RG+P SVF+ELPRL ER G    E G+ITA  +VL++ +   DPI + VRS
Sbjct: 217 LSVGEPAVRRGFPPSVFAELPRLFERAG--AIEGGSITAFYTVLIEDEEGGDPIGEEVRS 274

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGH+ L+R LA+   YP +DPL S+SR+  +  S + +     +   + ++ E   + 
Sbjct: 275 ILDGHVYLSRKLAQANHYPAIDPLMSLSRVFPRVTSPEHQAAAGKVRAWLAKYAEIEFLL 334

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            IG Y+PG D + D+AV ++P +   L+Q
Sbjct: 335 QIGEYKPGGDPLADEAVQRMPALRALLQQ 363


>gi|147675718|ref|YP_001217653.1| flagellum-specific ATP synthase [Vibrio cholerae O395]
 gi|262167490|ref|ZP_06035196.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC27]
 gi|146317601|gb|ABQ22140.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O395]
 gi|227014026|gb|ACP10236.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O395]
 gi|262024062|gb|EEY42757.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC27]
          Length = 439

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 203/320 (63%), Gaps = 4/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +     +      + P + R+ + +    GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAIPINP-LARKPINEPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400
           +A+ G YP +D   SVSR+  +  + DE  L+S ++  ++    + +D+  IG Y+ G D
Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKLGTD 399

Query: 401 LILDKAVHQVPIIYDFLKQS 420
             +D A    P +  +L+Q+
Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419


>gi|149184181|ref|ZP_01862499.1| ATPase FliI/YscN [Erythrobacter sp. SD-21]
 gi|148831501|gb|EDL49934.1| ATPase FliI/YscN [Erythrobacter sp. SD-21]
          Length = 443

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 131/324 (40%), Positives = 194/324 (59%), Gaps = 2/324 (0%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GR ++  G+PIDG   +     +         A++R RV + F  GIR ++  T    
Sbjct: 102 FLGRAVDGAGEPIDGGGPV-LATTTWPAGGHRVGALDRSRVTQMFDCGIRSLNALTTFGV 160

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219
           GQRIG+ AGSG+GKS L+ M   +   D V++ L+GER REV +F+  ++ G+    + +
Sbjct: 161 GQRIGIMAGSGVGKSVLMDMIVDNAEADAVVVGLIGERAREVSDFVSRHMAGERAANTAI 220

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V   +D +  LR    + A +IAE+  S+G  VLLILDS+TR AH+ REI    GE   A
Sbjct: 221 VAVPADHAANLRLRGAMLATSIAEHLRSQGKRVLLILDSLTRVAHAAREIGILLGEPGAA 280

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP S  S + +++ER G S++  G IT + +VL DGD+HNDP+ D+ R+ILDGHIVL+
Sbjct: 281 RGYPPSALSTITKMIERAGNSKETGGAITGIYTVLADGDDHNDPVVDTARAILDGHIVLS 340

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R +A+ G+YP VD  AS+SR+ +   S +  +       L   FEE RD+ ++G YR G 
Sbjct: 341 REIAQRGQYPAVDVGASLSRVMNDIVSVEHVENARKFRALSASFEENRDLIMMGAYRQGT 400

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423
           D +LD+A+ + P + DFL Q   +
Sbjct: 401 DSLLDEAIIRQPRMSDFLAQGTGE 424


>gi|191173266|ref|ZP_03034796.1| flagellar protein export ATPase FliI [Escherichia coli F11]
 gi|190906383|gb|EDV65992.1| flagellar protein export ATPase FliI [Escherichia coli F11]
 gi|324013496|gb|EGB82715.1| flagellar protein export ATPase FliI [Escherichia coli MS 60-1]
          Length = 457

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/326 (44%), Positives = 196/326 (60%), Gaps = 12/326 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+   G L        PP   + R  +E    TG+R I+ 
Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE    +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 289 GEPSATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+  +G
Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D +LDKA+   P +  +L+Q
Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434


>gi|92114081|ref|YP_574009.1| ATPase FliI/YscN [Chromohalobacter salexigens DSM 3043]
 gi|91797171|gb|ABE59310.1| ATPase FliI/YscN [Chromohalobacter salexigens DSM 3043]
          Length = 468

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/386 (38%), Positives = 218/386 (56%), Gaps = 11/386 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-- 100
            CL +   H G       +V+    D +++ P+G    +  G  V   G  R   ++   
Sbjct: 62  ACLVELAQH-GHVGYAEAEVVGFAGDRLFLMPLGDTHGLVPGARVLTLGNNRQDAASARR 120

Query: 101 ------WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
                   GRV++  G+P+DG  +L     +    + + P ++R  ++     GIR I+ 
Sbjct: 121 FPLGDALLGRVLDGNGRPLDGKGALDHASHAPLSTAPINP-LDRAPIDNVIDVGIRAING 179

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M +R    D +++ L+GERGREV++FIE+ LG + 
Sbjct: 180 LLSVGRGQRMGLFAGSGVGKSVLLGMMSRYTQADVIVVGLIGERGREVKDFIENILGPEG 239

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
            +++VVV A +D SP+ R      A  IAE F  +G NVLLI+DS+TR+A ++REIA   
Sbjct: 240 RERAVVVAAPADVSPLQRLQGASYATRIAEGFRDEGRNVLLIMDSLTRYAMAMREIALAV 299

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF+ LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILD
Sbjct: 300 GEPPATKGYPPSVFARLPGLVERAGNGRPGGGSITAFYTVLTEGDDQQDPIADAARAILD 359

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GH+VL+R LAE G YP +D  AS+SR        D ++       L  R++  RD+  +G
Sbjct: 360 GHVVLSRQLAESGHYPAIDIEASISRAMTAIVEGDHQRRAQRFKQLFSRYQRNRDLISVG 419

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            Y  G D  LD+AV   P +  FL+Q
Sbjct: 420 AYAAGHDPQLDRAVALYPRLEAFLQQ 445


>gi|264676597|ref|YP_003276503.1| flagellar protein export ATPase FliI [Comamonas testosteroni CNB-2]
 gi|262207109|gb|ACY31207.1| flagellar protein export ATPase FliI [Comamonas testosteroni CNB-2]
          Length = 462

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/413 (37%), Positives = 231/413 (55%), Gaps = 26/413 (6%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------------- 93
           +HQ      L +V+    +  ++ P G  + +S G +V     F                
Sbjct: 50  IHQHGQEPVLAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVVETEKVSQ 109

Query: 94  -----RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKT 147
                R+       GRV+++ G P+D    LG   +  E++ + P  AM+R  V +   T
Sbjct: 110 TVGVLRLPMGDGLLGRVVDSQGTPLDHAGELGS--VVPEVLDRNPINAMDRDPVRESLDT 167

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G++ ++    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+E
Sbjct: 168 GVKALNALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVE 227

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           D LG  +  ++VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + 
Sbjct: 228 DILGAQDRSRAVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQ 287

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA   GE P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD
Sbjct: 288 REIALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIAD 347

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGH+VL+R+LAE G YP +D   S SR+     S +  +L      +  R+++ 
Sbjct: 348 AARAILDGHVVLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKG 407

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           RD+  +G Y PG D  LD+A+   P +  FL+QS  + SS E     + + +Q
Sbjct: 408 RDLVQVGAYVPGSDPQLDEAIALQPAMTGFLQQSMFESSSMEQSLAGMAQAMQ 460


>gi|283836559|ref|ZP_06356300.1| invasion protein InvC [Citrobacter youngae ATCC 29220]
 gi|291067488|gb|EFE05597.1| invasion protein InvC [Citrobacter youngae ATCC 29220]
          Length = 441

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/294 (47%), Positives = 189/294 (64%), Gaps = 4/294 (1%)

Query: 129 MSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           ++ +PPA M+R  ++     GIR ID       GQRIG+FA +G GKSTLLSM       
Sbjct: 131 LNALPPAPMDRALIDTILPVGIRAIDGALTCGRGQRIGIFAAAGGGKSTLLSMLCDGVEA 190

Query: 188 DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D ++++LVGERGREVREF+E  L +N + + V +VATS+   + R  A   A TIAEYF 
Sbjct: 191 DVIVLALVGERGREVREFLEFTLSENARARCVTIVATSERPALERLKASFVATTIAEYFR 250

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G NV+L++DS+TR+A + RE+  +SGE PVA G+P SVF+ LPRLLER G    + G+
Sbjct: 251 DRGKNVVLMIDSLTRYARAAREVGLSSGEPPVASGFPPSVFATLPRLLERAG--NGKVGS 308

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT   +VLV+GDN N+P+AD VRSILDGHIVL+R LAE   YP +D  ASVSR+  +  +
Sbjct: 309 ITGFYTVLVEGDNMNEPVADEVRSILDGHIVLSRKLAEANHYPAIDVSASVSRVMRQIAT 368

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   L   L  L+  + E   +  +G Y+ G DL  DKA+   P I  FL+Q+
Sbjct: 369 PEHVDLAGYLRKLLALYREIELLVRVGEYKQGQDLEADKALRCWPEIQRFLQQN 422


>gi|326386949|ref|ZP_08208563.1| FliI/YscN family ATPase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208629|gb|EGD59432.1| FliI/YscN family ATPase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 442

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/354 (39%), Positives = 205/354 (57%), Gaps = 15/354 (4%)

Query: 83  LGDLVFHWGRFRISPSA---------CWCGRVINALGKPIDGDDSL--GKGDLSMEIMSK 131
           LGD V      R+ P            + GR ++  G+PIDG   +  G+   S  I + 
Sbjct: 74  LGDPVLLRPGARVRPEGRPGMLPVGEAFLGRAVDGEGQPIDGGPPIMSGREWPSGGIRAG 133

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
              A++R  V   F  G+R ++  T    GQRIG+ AGSG+GKS LL M A     + VI
Sbjct: 134 ---ALDRSPVRATFDVGVRALNALTTFGVGQRIGIMAGSGVGKSVLLDMIAHGAEAEIVI 190

Query: 192 ISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GER REV +F+E ++ G   ++S+VV   +D +P LR    + A ++AEYF   G 
Sbjct: 191 VGLIGERAREVSDFVERHMQGPKRERSIVVAVPADHAPNLRIRGAMLATSMAEYFRKAGR 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLLI+DS+TR AH+ REIA   GE   ARGYP S  + + +L+ER G S +  G++T +
Sbjct: 251 RVLLIMDSLTRVAHAGREIALLLGEPGAARGYPPSALATITKLVERAGNSAESGGSVTGL 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL DGDN +DP+ D+ RSILDGH+VL+R LA+ G+YP +D  AS+SR+ +   + D  
Sbjct: 311 YTVLADGDNQDDPVVDTARSILDGHVVLSRDLAQRGQYPAIDIAASLSRVMNDIVAPDHA 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           ++      LI  +E  RD+ L+G YR G D  LD+A+     +  FL QS  ++
Sbjct: 371 RIARKFRALIATYEANRDLVLMGAYRQGADPQLDRAIAMHDRLTAFLAQSQKEI 424


>gi|330445369|ref|ZP_08309021.1| flagellar protein export ATPase FliI [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489560|dbj|GAA03518.1| flagellar protein export ATPase FliI [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 440

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 207/335 (61%), Gaps = 4/335 (1%)

Query: 87  VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
           + H     + P     GRVI+ +G P+DG   +     +      + P ++R+ +++   
Sbjct: 89  ILHNSGLPVGPE--LLGRVIDGVGNPLDGLGPIFTEQRASFNAIPINP-LSRKPIKEPLD 145

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
            GI+ I+    +  GQRIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFI
Sbjct: 146 VGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTSAQIVVVGLIGERGREVKEFI 205

Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           ++ LG +   +SVVV A +D SP++R     T++TIAEYF  +G +VLL++DS+TRFA +
Sbjct: 206 DEILGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAEYFRDQGFDVLLLMDSLTRFAQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            REIA + GE P  +GYP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIA
Sbjct: 266 QREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLSEGDDLQDPIA 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+ R+ILDGHIVL+R +A+ G YP +D   SVSR+     S +   +  ++  ++    +
Sbjct: 326 DASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAIVSEEHMLMSKAVRQILSICRK 385

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +D+  IG Y+PG D  +D+A    P +  +L+Q+
Sbjct: 386 NQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQT 420


>gi|90415349|ref|ZP_01223283.1| flagellum-specific ATP synthase FliI [marine gamma proteobacterium
           HTCC2207]
 gi|90332672|gb|EAS47842.1| flagellum-specific ATP synthase FliI [marine gamma proteobacterium
           HTCC2207]
          Length = 444

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/353 (41%), Positives = 207/353 (58%), Gaps = 9/353 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA---CWCGRVINALGKPIDGDD 117
           +V+  N D +Y+ P    E + +G     W   R + ++      GRVI+ LG+P+D   
Sbjct: 61  EVVGFNDDTLYLMP--FSEPVGIGPGARVWVVSRHAKASLGEAMLGRVIDGLGQPLDEGG 118

Query: 118 SLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +   + L +E ++  P  M R  + K   TGI+ I+    L  GQRIG+ AGSG+GKS 
Sbjct: 119 PIAYSEQLGLEGLAINP--MERGPISKILDTGIKAINTCLTLGQGQRIGLVAGSGVGKSV 176

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAP 235
           LL M  R+   D V+I L+GERGREV+EFI+  LG+  L KSVVV A ++ SP+LR  A 
Sbjct: 177 LLGMLTRNTEADVVVIGLIGERGREVQEFIQHTLGEEGLAKSVVVAAPANISPVLRLKAT 236

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                IAEYF  +G NVL++ DS+TR AH+ REI    GE P A+GYP SVF+ LPRL+E
Sbjct: 237 YLTHLIAEYFRDRGKNVLMLCDSLTRVAHAQREIGLAIGEPPTAKGYPPSVFAMLPRLIE 296

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G   K  G+ITA+ +VL +GD+  DPI D  R+ LDG ++L+RSLA+   YP +D   
Sbjct: 297 RTGVGRKGHGSITAIYTVLAEGDDRADPIVDIARASLDGQVLLSRSLADAAHYPAIDLSG 356

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           S+SR+     + D  K  +    L   +++  D+  +G Y  G +  LD+A+ 
Sbjct: 357 SISRVMPNLVAPDVFKAANRFRRLWTLYQQNEDLIQVGAYEAGTNPDLDEAIR 409


>gi|332702975|ref|ZP_08423063.1| ATPase, FliI/YscN family [Desulfovibrio africanus str. Walvis Bay]
 gi|332553124|gb|EGJ50168.1| ATPase, FliI/YscN family [Desulfovibrio africanus str. Walvis Bay]
          Length = 436

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 202/320 (63%), Gaps = 4/320 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GR ++A G P+DG D+    +    + ++ P  + R R+ +    G+R ++    L  
Sbjct: 99  FLGRALDAFGAPLDGRDAPAP-EAYYPLHTEPPNPLTRPRINEPLDVGVRAVNALLTLGK 157

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+ AGSG+GKST++ M AR    D  +I+LVGERGREV EF+E  LG + +K+SV+
Sbjct: 158 GQRVGIMAGSGVGKSTVMGMMARYTKADVNVIALVGERGREVVEFMERDLGPEGMKRSVL 217

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD SP++R  A   A  +AE+F  +G +VLL++DS+TRF  + RE+   +GE P  
Sbjct: 218 VVATSDTSPLVRMRAAYAATAMAEFFRDQGKDVLLMMDSVTRFCMAGREVGLAAGEPPTR 277

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            G+  SVF+ LP+LLER G S K  G+IT + +VLVDGD+  +P+AD+ RSILDGHIVL 
Sbjct: 278 GGFTPSVFAHLPKLLERAGKSAK--GSITGIYTVLVDGDDFTEPVADATRSILDGHIVLT 335

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LA+ G YP +D L SVSRL     S + +    +L   +  F+   D+  IG Y  G 
Sbjct: 336 RELADAGHYPSIDVLKSVSRLRSDITSPEAQVAGRTLIRHMATFKRVEDMVNIGAYAQGS 395

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +  +DKA+  +  I DFL+Q
Sbjct: 396 NPEIDKALKMIGPINDFLRQ 415


>gi|330953278|gb|EGH53538.1| type III secretion component [Pseudomonas syringae Cit 7]
          Length = 442

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/374 (39%), Positives = 210/374 (56%), Gaps = 5/374 (1%)

Query: 53  GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111
           G   +   +VI  + D   + P+G  E +S    +   G+   +       GRVI+ +G+
Sbjct: 55  GNGRELSAEVIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGE 114

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
            +DG   +    L    +   PPA  +RQR+ K    G+R ID    L  GQR+G+F   
Sbjct: 115 FLDGPAPVVASGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEP 174

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           G+GKS+LL+   R+   D ++I L+GERGREVRE +E  L    + ++V VVATSD    
Sbjct: 175 GVGKSSLLASIVRNSNVDVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAA 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
            R  A   A T AEY   +G +VLL++DS+TRFA + RE+    GE P  RGYP S FS 
Sbjct: 235 ERVRAAYVATTQAEYHRDQGRSVLLLMDSLTRFARAQRELGLAVGEPPTRRGYPPSFFSA 294

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LPRLLER GP     G+ITA+ +VL +GD   DP+A+  RSILDGHIVL+  LA+   +P
Sbjct: 295 LPRLLERAGPGPS--GSITALYTVLTEGDASMDPVAEETRSILDGHIVLSADLAQRDHFP 352

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D L S SRL D   + + ++L S +  LI R EE   +  +G Y  G D + D+A+ +
Sbjct: 353 AIDVLRSRSRLMDHIATTEHRQLASRMRELIARREEIELLIQVGEYAAGSDPLADEAIAR 412

Query: 410 VPIIYDFLKQSPSD 423
              I  FL+Q  ++
Sbjct: 413 HADIEAFLRQPATE 426


>gi|253996302|ref|YP_003048366.1| FliI/YscN family ATPase [Methylotenera mobilis JLW8]
 gi|253982981|gb|ACT47839.1| ATPase, FliI/YscN family [Methylotenera mobilis JLW8]
          Length = 482

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 200/328 (60%), Gaps = 2/328 (0%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV++  G P+D    +     S      + P M R  +E+    G+R I+    +
Sbjct: 137 ADLLGRVVDGAGNPLDDLGDIKPSQSSALNARPMNPLM-RAPIEEVLDVGVRAINSMLTV 195

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217
             GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +S
Sbjct: 196 GRGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVQEFIEQILGPEGLARS 255

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A +D   ++R      A TIAE F ++G NVLLI+DS+TR+A + REIA   GE P
Sbjct: 256 VVVAAPADAPALMRLQGASYATTIAESFRNEGKNVLLIMDSLTRYAMAQREIALAIGEPP 315

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP L+ER G   + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIV
Sbjct: 316 ATKGYPPSVFAKLPALVERAGNGRRGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIV 375

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+RSLAE G YP +D   S+SR      S + +KL   L  L  R+  + D+  +G Y  
Sbjct: 376 LSRSLAESGHYPAIDVEQSISRAMHNITSPEHQKLARKLKQLNSRYARSVDLINVGAYEA 435

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           G D +LD A+ +  +I   L+Q  ++ S
Sbjct: 436 GSDAVLDMAISKHELIERLLQQDVAERS 463


>gi|224370784|ref|YP_002604948.1| FliI [Desulfobacterium autotrophicum HRM2]
 gi|223693501|gb|ACN16784.1| FliI [Desulfobacterium autotrophicum HRM2]
          Length = 451

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/370 (40%), Positives = 213/370 (57%), Gaps = 10/370 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC----WCGRVINALG 110
           N +   +VI    D V + P G    IS G  +        +P+      + GRVI+ +G
Sbjct: 58  NREIKAEVIGFRDDKVLLMPYGDLRGISPGSRIIP---LEDTPAVAVGDAFLGRVIDGMG 114

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
            P+DG   +          + + P M R+ +++    GI  I+   PL  GQR+ + AGS
Sbjct: 115 APLDGKGKIPFTHKYPLYGNPINP-MERKTIKEPLDVGICAINTMIPLGRGQRVAIMAGS 173

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
           G+GKS L+ M  +    D +I+ L+GERGREV++F+ D LG + +++SVVV ATSD  P+
Sbjct: 174 GVGKSVLMGMMTKHTTADVIILGLIGERGREVKDFVSDTLGKEGMERSVVVAATSDSPPL 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           +R      A T+AEYF  +G NVLLI+DSITR+A S R++   +GE P +RGY  S F +
Sbjct: 234 VRMRGAYLATTLAEYFRDQGKNVLLIMDSITRYAMSSRDVGLAAGEPPTSRGYTPSFFVQ 293

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +P LLER G  E   G+IT + +VLV+GD+ NDP+ D+VRSI+DGHIVL+R LA +G YP
Sbjct: 294 IPVLLERAGYIEG-GGSITGIYTVLVEGDDMNDPVGDTVRSIVDGHIVLSRDLANKGHYP 352

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D LASVSR+       +  +L      +I       D+  IG Y  G D  +D+A   
Sbjct: 353 AIDVLASVSRVMRDVSQPEHMELRKRAVDVIAAHRGAEDMISIGAYVDGSDARIDEAKRL 412

Query: 410 VPIIYDFLKQ 419
           +P I  FL+Q
Sbjct: 413 MPKIDGFLRQ 422


>gi|320354320|ref|YP_004195659.1| type III secretion system ATPase, FliI/YscN [Desulfobulbus
           propionicus DSM 2032]
 gi|320122822|gb|ADW18368.1| type III secretion system ATPase, FliI/YscN [Desulfobulbus
           propionicus DSM 2032]
          Length = 459

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/328 (42%), Positives = 203/328 (61%), Gaps = 7/328 (2%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPA-MNRQRVEKGFKTGIRVI 152
           IS      GRV++ + +P+D    L    L  E  +  +PP  M R  + +    GIR I
Sbjct: 90  ISVGDGLLGRVLDGMAQPLDQGPPL---YLPHEKALYSLPPGPMQRDAITQPLDLGIRAI 146

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           +       GQR+G+ AGSG+GKS LL M A+    D  +I+L+GERGREV+EFIE  LG 
Sbjct: 147 NGLLTCGIGQRMGIMAGSGVGKSVLLGMMAKYAKADINVIALIGERGREVKEFIERDLGK 206

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           ++L  SV+V  TSD+SP+LR      A  IAEYF  +G NVLL++DS+TRFA ++REI  
Sbjct: 207 ESLAHSVIVAVTSDQSPLLRMRGAFVATAIAEYFCQRGKNVLLMMDSVTRFAMAMREIGL 266

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE P  +GY  SVF+ LP+LLER G + + +G+IT + +VLVDGD+  +P+ADSVRSI
Sbjct: 267 SIGEPPTTKGYTPSVFATLPKLLERAG-NFQHQGSITGLYTVLVDGDDLTEPVADSVRSI 325

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHIVL+RS+A +  YP +D + S SR+     ++  ++L      ++  + E+ D+  
Sbjct: 326 LDGHIVLSRSIAAKNHYPAIDVMMSTSRVMRDITTSRHRELAGKARSVMAIYRESEDLIN 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           IG Y  G +  +D A+ ++  I  FL Q
Sbjct: 386 IGAYATGSNKKIDYAISRMDAINAFLTQ 413


>gi|322833199|ref|YP_004213226.1| flagellar protein export ATPase FliI [Rahnella sp. Y9602]
 gi|321168400|gb|ADW74099.1| flagellar protein export ATPase FliI [Rahnella sp. Y9602]
          Length = 454

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/337 (42%), Positives = 201/337 (59%), Gaps = 7/337 (2%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPL 158
             GRV++   KP+DG   L   D         PP   + R  +      G+R I+    +
Sbjct: 115 LLGRVLDGSAKPLDG---LPPPDTGYRAALITPPFNPLQRTPITDVLDVGVRAINALLTV 171

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LGD  + +S
Sbjct: 172 GRGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGDEGRARS 231

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P
Sbjct: 232 VVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPP 291

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+V
Sbjct: 292 ATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVV 351

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R LAE G YP +D  AS+SR         +   V +   L+  ++  RD+  +G Y  
Sbjct: 352 LSRRLAESGHYPAIDIEASISRAMTSLIDDAQYGRVRNFKQLLSSYQRNRDLISVGAYAA 411

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           G D +LD+A+   P + +FL+Q   + S+ ED   E+
Sbjct: 412 GSDPMLDRAIKLYPQMENFLQQDIMERSTYEDACLEL 448


>gi|299531258|ref|ZP_07044668.1| flagellar protein export ATPase FliI [Comamonas testosteroni S44]
 gi|298720665|gb|EFI61612.1| flagellar protein export ATPase FliI [Comamonas testosteroni S44]
          Length = 462

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/413 (37%), Positives = 231/413 (55%), Gaps = 26/413 (6%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------------- 93
           +HQ      L +V+    +  ++ P G  + +S G +V     F                
Sbjct: 50  IHQHGQEPVLAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVMETEKVSQ 109

Query: 94  -----RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKT 147
                R+       GRV+++ G P+D    LG   +  E++ + P  AM+R  V +   T
Sbjct: 110 TVGVLRLPMGDGLLGRVVDSQGIPLDHAGELGS--VVPEVLDRNPINAMDRDPVRESLDT 167

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G++ ++    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+E
Sbjct: 168 GVKALNALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVE 227

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           D LG  +  ++VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + 
Sbjct: 228 DILGAQDRSRAVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQ 287

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA   GE P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD
Sbjct: 288 REIALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIAD 347

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGH+VL+R+LAE G YP +D   S SR+     S +  +L      +  R+++ 
Sbjct: 348 AARAILDGHVVLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKG 407

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           RD+  +G Y PG D  LD+A+   P +  FL+QS  + SS E     + + +Q
Sbjct: 408 RDLVQVGAYVPGSDPQLDEAIALQPAMTGFLQQSMFESSSMEQSLAGMAQAMQ 460


>gi|91776327|ref|YP_546083.1| ATPase FliI/YscN [Methylobacillus flagellatus KT]
 gi|91710314|gb|ABE50242.1| ATPase FliI/YscN [Methylobacillus flagellatus KT]
          Length = 472

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 202/321 (62%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRVI+A G+P+D    L   + S+ + ++    ++R  +E+    G+R I+    + 
Sbjct: 128 ALLGRVIDAAGRPLDELGPL-NSEHSVPLNTRPLNPLSRAPIEEVLDVGVRAINSMLTVG 186

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    + +++ L+GERGREV+EFIE  LG + L ++V
Sbjct: 187 RGQRMGLFAGSGVGKSVLLGMMARYTTAEVIVVGLIGERGREVKEFIEQILGPEGLARAV 246

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D   ++R      A  IAEYF ++G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 247 VVAAPADVPALMRLQGASYATAIAEYFRNQGKDVLLIMDSLTRYAMAQREIALAIGEPPA 306

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G  +  +G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 307 TKGYPPSVFAKLPALVERAGNGKPGEGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 366

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE G YP +D   S+SR      S + +K    L  L  R+   +D+  +G Y  G
Sbjct: 367 SRSLAESGHYPAIDIEQSISRAMHNITSPEHQKNARKLKQLNSRYTRNQDLINVGAYESG 426

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LD+A+ +   I  FL+Q
Sbjct: 427 SDPVLDEAIMRHEAIEAFLQQ 447


>gi|194434949|ref|ZP_03067192.1| flagellar protein export ATPase FliI [Shigella dysenteriae 1012]
 gi|194416784|gb|EDX32910.1| flagellar protein export ATPase FliI [Shigella dysenteriae 1012]
 gi|332095522|gb|EGJ00538.1| flagellar protein export ATPase FliI [Shigella dysenteriae 155-74]
          Length = 457

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/321 (43%), Positives = 194/321 (60%), Gaps = 2/321 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGRE+++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGRELKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+   PIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQAPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR      +      + +   L+  F+  RD+  +G Y  G
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALINEQHYARMRTFKQLLSSFQRNRDLVSVGAYAKG 413

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D +LDKA+   P +  +L+Q
Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434


>gi|329896196|ref|ZP_08271390.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC3088]
 gi|328921939|gb|EGG29305.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC3088]
          Length = 443

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 141/331 (42%), Positives = 198/331 (59%), Gaps = 9/331 (2%)

Query: 95  ISPSACWCGRVINALGKPIDGD----DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           +S S    GRVIN LG+ ID      DS      S    SK+PP + +  + +    G+R
Sbjct: 96  LSVSDDLLGRVINPLGEIIDSQQVTRDSRNATHFSG---SKIPP-LEKASINQPLDVGVR 151

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           VI+    +  GQRIG+ AGSG+GKSTL++M  +    D VI+ L+GERGRE REFIED L
Sbjct: 152 VINALLTMAKGQRIGLVAGSGVGKSTLMAMITKHTDADVVIVGLIGERGREAREFIEDTL 211

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G + L+K+++V+ATSD + ++R+        +AEYF  KG NVLL+ DS+TR AH+ REI
Sbjct: 212 GPEGLRKAIIVLATSDTTAVMRRRGAEVCHILAEYFRDKGQNVLLLCDSLTRVAHAQREI 271

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
               GE P ++GYP SVF+ELP+L+ER G      G+I+++ +VL + D   DPI +  R
Sbjct: 272 GLAVGEPPTSKGYPPSVFTELPKLMERGGMGRPGSGSISSIYTVLAEYDEGMDPIVEIAR 331

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           + LDG I+L+R LA+ G YP +D   S+SRLA K  S +     +        +E+ +DI
Sbjct: 332 ATLDGQIMLSRQLADAGHYPAIDLNGSISRLAAKVVSDEVLDAATRYRRYWSLYEQNKDI 391

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             IG Y+ G D  LD AV     +  F +QS
Sbjct: 392 INIGAYKSGADESLDVAVRMRSSMVKFARQS 422


>gi|332187915|ref|ZP_08389648.1| hypothetical protein SUS17_3044 [Sphingomonas sp. S17]
 gi|332012076|gb|EGI54148.1| hypothetical protein SUS17_3044 [Sphingomonas sp. S17]
          Length = 445

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 194/323 (60%), Gaps = 2/323 (0%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            A   GRV++  GKPIDG   + +G     +  K+   ++R RV +    G+R I+    
Sbjct: 100 GAAMLGRVVDGSGKPIDGLGPI-RGAGRWPLAGKMQSPLDRGRVLEPLDVGVRAINGLLT 158

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKK 216
           +  GQR+G+ AGSG+GKS LL M  R+   D ++I L+GER REV +F+E  + G+   +
Sbjct: 159 IGQGQRVGIMAGSGVGKSVLLGMMVRAAKADVIVIGLIGERSREVADFLETKVAGEARAR 218

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVV   ++ SP+LR    L A  IAE F ++G  VLLI+DS+TR AH+ REI    GE 
Sbjct: 219 SVVVAVPANHSPVLRIRGALRATAIAEAFRAEGKKVLLIMDSLTRVAHAGREIGLALGEP 278

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             ARGYP S  + LP L+ER G      G+ITA+ +VL DGD+ NDP+ DS RSILDGHI
Sbjct: 279 ASARGYPPSAIAMLPNLIERAGADAHGTGSITAIYTVLADGDDGNDPVVDSARSILDGHI 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VLNR LAE G YP +D   SVSR+     +    +   +L   +  +EE RD+ L+G YR
Sbjct: 339 VLNRHLAERGVYPAIDIGPSVSRVMTDIVAKPHAQAARTLRRHLATYEENRDLVLMGAYR 398

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D  +D A+   P + ++++Q
Sbjct: 399 SGADPAIDAAIACHPAVMEYIRQ 421


>gi|157371190|ref|YP_001479179.1| flagellum-specific ATP synthase [Serratia proteamaculans 568]
 gi|157322954|gb|ABV42051.1| ATPase, FliI/YscN family [Serratia proteamaculans 568]
          Length = 453

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 3/338 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++   KP+DG  +   G  +  I +   P + R  +E+    G+R I+    + 
Sbjct: 114 ALLGRVLDGSAKPLDGLPAPETGYRAPLITAPFNP-LQRTPIEQVLDVGVRTINGLLTVG 172

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSV 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL
Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR        +  + V +   ++  ++  RD+  +G Y  G
Sbjct: 353 SRRLAEAGHYPAIDIEASISRAMTSLIDEEHYRRVRNFKQMLASYQRNRDLISVGAYVSG 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435
            D +LDKA+   P +  +L+Q   + S  +D  Q++ +
Sbjct: 413 SDPLLDKAMALYPQMEAYLQQGIFERSGYDDACQQLQQ 450


>gi|238918891|ref|YP_002932405.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146]
 gi|84663099|gb|ABC60081.1| EsaN [Edwardsiella ictaluri 93-146]
 gi|238868459|gb|ACR68170.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146]
          Length = 438

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/362 (41%), Positives = 217/362 (59%), Gaps = 7/362 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+ I  D   + P      ++ G LV   G +  I  S    GRVI+ALG+P DG   
Sbjct: 59  AEVVAIEGDQALLSPYQPPLGLANGMLVTPLGAQACIGVSEALLGRVIDALGQPADGKPP 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +      + S  P  M R  ++     G+R ID    +  GQR+G+F+ +G GKSTLL
Sbjct: 119 -AQATQWRSLDSPPPDPMQRAPIDTLLPMGVRAIDATLSVGVGQRLGIFSPAGCGKSTLL 177

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
            M A +   D VI++L+GERGREVREF+E  +   L+ +SVV++ATSD   + R  A  T
Sbjct: 178 GMMATNSQADVVILALIGERGREVREFLEQIMSPELRARSVVILATSDRPALERIKAADT 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G NVLL++DS+TR+A +IREIA  +GE  V+ GYP S+++ LPRLLER 
Sbjct: 238 ATVIAEYFRDRGHNVLLLVDSLTRYARAIREIALAAGEPTVSGGYPPSLYARLPRLLERA 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+    G+ITA  +VLV  +  +DP+A+ VRS+LDGHIVL+R LAE   YP +D +AS+
Sbjct: 298 GPA--ACGSITAFYTVLV--EQKSDPLAEEVRSLLDGHIVLSRRLAEASHYPAIDIMASI 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  +   ++  + L HL+  ++E   +  +G YR G D   D+A+ +   I + L
Sbjct: 354 SRVMSQIVTPQHRQAANRLRHLMATWQEIALLVRVGEYRAGQDTDADEAIARREAIDNLL 413

Query: 418 KQ 419
            Q
Sbjct: 414 CQ 415


>gi|297538197|ref|YP_003673966.1| flagellar protein export ATPase FliI [Methylotenera sp. 301]
 gi|297257544|gb|ADI29389.1| flagellar protein export ATPase FliI [Methylotenera sp. 301]
          Length = 510

 Score =  249 bits (636), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 145/327 (44%), Positives = 202/327 (61%), Gaps = 6/327 (1%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV++  G P+D    LGK     S  + ++    + R  +E+    G+R I+    + 
Sbjct: 169 LGRVVDGAGNPLD---DLGKIVAAQSSPLNARPMNPLMRAPIEEILDVGVRAINSMLTVG 225

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG   L +SV
Sbjct: 226 RGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVQEFIEQILGPVGLARSV 285

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +D   ++R      A TIAE F  +G NVLLI+DS+TR+A + REIA   GE P 
Sbjct: 286 VVAAPADAPALMRLQGANYATTIAENFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPA 345

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G  ++ +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL
Sbjct: 346 TKGYPPSVFAKLPALVERTGNGKRGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIVL 405

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +RSLAE G YP +D   S+SR      S + +KL   L  L  R+  + D+  +G Y  G
Sbjct: 406 SRSLAESGHYPAIDVEQSISRAMHNITSPEHQKLARKLKQLNSRYMRSVDLINVGAYEAG 465

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425
            D +LD+A+ +   I  FL+Q  S+ S
Sbjct: 466 SDAVLDQAIARHDKIDAFLQQGISERS 492


>gi|307944363|ref|ZP_07659704.1| flagellum-specific ATP synthase [Roseibium sp. TrichSKD4]
 gi|307772709|gb|EFO31929.1| flagellum-specific ATP synthase [Roseibium sp. TrichSKD4]
          Length = 455

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 152/380 (40%), Positives = 225/380 (59%), Gaps = 13/380 (3%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLG 120
           VI ++ + V + P G  + +S+   V   GR  ++P      GRV++A G+ +DG + + 
Sbjct: 80  VIGMDKNEVILVPSGSIDGLSVRAQVVRTGRQPMAPCGKDLLGRVVDAFGEALDGKEKI- 138

Query: 121 KGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
               +   + + PP AM R  ++  F+T IR ID    +  GQRIG+F  +G+GKS LLS
Sbjct: 139 ---TTFTDLKRDPPQAMKRTIIDTPFETRIRAIDGMLTIGRGQRIGIFGSAGVGKSVLLS 195

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
              +    D +++ L+GERGREV EFI++ LG + LKK+ + VAT+D  P  R  A  +A
Sbjct: 196 EIIKGALVDVIVVGLIGERGREVAEFIQNNLGAEGLKKACLFVATADRPPAERLRAAYSA 255

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
              AE F  +G +VLL++DS TR A + REI   +GELPV RG+P S F+ LP LLER G
Sbjct: 256 TAAAEQFRDEGLSVLLLIDSATRVARATREIGLAAGELPVRRGFPPSTFTLLPELLERAG 315

Query: 299 PSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            S  +KG ITA+ +VLV+GDN + DP+AD +RS+LDGHI+L+R LA +  YP +D   S 
Sbjct: 316 TS--DKGAITAIYTVLVEGDNDDADPVADELRSLLDGHIILSRKLAAKNHYPAIDVSRSK 373

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+      A+     S L   I +  E   +  +G Y+PG D + D AV +   I++FL
Sbjct: 374 SRVMGAVVDAEHGASASKLGSYIAKLNEIELLLQVGEYKPGGDPLADIAVEKQSEIFEFL 433

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q+P + +    FQ+   +L
Sbjct: 434 QQTPGEFTD---FQDSKSRL 450


>gi|218887379|ref|YP_002436700.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758333|gb|ACL09232.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 468

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 142/333 (42%), Positives = 205/333 (61%), Gaps = 5/333 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR  +A G P+D    +    ++  + +  P  + R R+      G+RVI+    L  GQ
Sbjct: 133 GRAFDAFGAPLDSGAHVVTTGVA-PLYASPPNPLARPRISDPLDVGVRVINSLLTLGKGQ 191

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           R+G+ AGSG+GKSTL+ M AR    D  +I L+GERGREV EF+E  LG + + +SV++V
Sbjct: 192 RVGIMAGSGVGKSTLMGMMARYTVADVNVIGLIGERGREVVEFMEKDLGPEGMARSVLIV 251

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD+SP++R  A   A  +AE+F  +G +VLL++DS+TRFA + RE+    GE P  +G
Sbjct: 252 ATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKG 311

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  +VF++LP+LLER G S  EKG IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R 
Sbjct: 312 YTPTVFAQLPKLLERAGRS--EKGTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRD 369

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G +P +D L S+SRL     + +       +T  +  F +  D+  IG Y  G + 
Sbjct: 370 LADMGHFPAIDVLRSISRLRSDICAKNVVDAGRVITRHLATFRKAEDMINIGAYAQGSNP 429

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
            +DKA+     I  FL+Q  +D +   D F ++
Sbjct: 430 DIDKAIAMNGPINAFLRQDVTDAAPLADSFAQL 462


>gi|238920314|ref|YP_002933829.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146]
 gi|238869883|gb|ACR69594.1| flagellum-specific ATP synthase, putative [Edwardsiella ictaluri
           93-146]
          Length = 452

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 8/324 (2%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
              GRV++   +P+DG    D    G LS +  +     + R  + +    G+R I+   
Sbjct: 112 ALLGRVLDGSARPLDGLPPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALL 167

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LGD   +
Sbjct: 168 TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGDEGRQ 227

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE
Sbjct: 228 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 287

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 288 PPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 347

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R LAE G YP +D  AS+SR             V S   L+  ++  RD+  +G Y
Sbjct: 348 VVLSRRLAEAGHYPAIDIEASISRAMTSLIDEAHYARVRSFKQLLSSYQRNRDLISVGAY 407

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G D +LD+A+   P +  FL+Q
Sbjct: 408 ARGSDPLLDQAIALYPQLEAFLQQ 431


>gi|302185362|ref|ZP_07262035.1| FliI/YscN family ATPase [Pseudomonas syringae pv. syringae 642]
          Length = 454

 Score =  248 bits (634), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 157/431 (36%), Positives = 236/431 (54%), Gaps = 25/431 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           VV  G +S++  +   + C    V +GD   V++      L +++    D   +  +G  
Sbjct: 28  VVVSGRVSAVNGIL--LECQVPAVRIGDLCRVYKTGGESMLAEIVGFTEDCALLSALGTP 85

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME---------I 128
           E I  G  +   G    +S      G V++  G+ +DG    G G  ++          I
Sbjct: 86  EGIEQGARIEPLGVSHSVSVDDSLLGSVLDGFGRRLDGQ---GDGAFALPGEHRPTQPVI 142

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              +PP   R R+     TG+R ID    L  GQR+G+FAG+G GK+TLL+  AR+   D
Sbjct: 143 CDAIPPT-QRPRIADAMPTGLRAIDAAITLGEGQRVGLFAGAGCGKTTLLAELARNMPCD 201

Query: 189 KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            ++  L+GERGRE+REF++  L D L+ +SV+V ATSD S + R  A  T   IAE +  
Sbjct: 202 VIVFGLIGERGRELREFLDHELDDELRARSVLVCATSDRSSMERARAAFTTTAIAEAYRQ 261

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGN 306
            G  VLL++DS+TRFA + REI   +GE P+ RG  P SV++ LPRL+ER G SE+  G+
Sbjct: 262 SGKRVLLLIDSLTRFARAQREIGIAAGE-PLGRGGLPPSVYTLLPRLVERAGRSEQ--GS 318

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ +VL++ D+ NDP+AD VRS++DGHIV++R LAE G YP +D  AS+SR+      
Sbjct: 319 ITAIYTVLIEQDSMNDPVADEVRSLIDGHIVMSRKLAERGHYPAIDVQASLSRITSSVTD 378

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              ++   +L  L+  +++   +  +G Y PG D + D AV     I  FL+Q   +L  
Sbjct: 379 RQHQRGNVTLRRLLAAYQQVEMLLRLGEYTPGNDTMTDCAVQLHEQINGFLQQ---ELRE 435

Query: 427 EDVFQEITKKL 437
               Q+   +L
Sbjct: 436 PQALQDTLHQL 446


>gi|116514989|ref|YP_802618.1| hypothetical protein BCc_046 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256843|gb|ABJ90525.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 457

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/439 (35%), Positives = 252/439 (57%), Gaps = 22/439 (5%)

Query: 15  YSKNL--VVQGGYISSITSVYYTVTCLSQ-YVCLGDFV----VHQGKNSDNLGQVIRINL 67
           + KNL  +    YI  + SV+  +  ++  Y  +G++      ++G  S  + +V+    
Sbjct: 15  FEKNLLNISNSIYIGKVLSVHSLIIEVTGIYSSIGEYCWVECFYKGIQSTIICKVMGFKK 74

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-------RFRISP-SACWCGRVINALGKPID--GDD 117
            I ++ P+     I  G  VF          +F+  P  +   GRV+N  G P+D  GD 
Sbjct: 75  KIFFLIPIQNSYGIFPGAKVFSENYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDNLGDL 134

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L K   +      + P +NR+ + +   TG+  I+    +  GQR+G+F+ +GIGKS L
Sbjct: 135 NLKKKLFNFFKKKPINP-LNRKPITEILDTGVCAINSLLTVGRGQRMGIFSQAGIGKSML 193

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M +R    D +++SLVGERGREV++FI++ LG D+LKKSVV+V+++D SP+ +  +  
Sbjct: 194 LGMISRHTDADIIVVSLVGERGREVKDFIDNILGKDSLKKSVVIVSSADVSPMFKIQSVE 253

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF +KG+NVLLI+DS+TR+A + RE++ +  E+PV R YP S+FS +P L+ER
Sbjct: 254 YATAVAEYFCNKGNNVLLIVDSLTRYAMAYREVSNSLYEIPVKR-YPASIFSNIPYLIER 312

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  + + G+IT+  ++L +GD +NDPI D  +S+LDGHI+L+  L+E G YP ++   S
Sbjct: 313 TGNIDNKSGSITSFYTILTEGDEYNDPILDITKSVLDGHIILSNVLSESGHYPAINIEKS 372

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL       D  +    +  LI  + +  DI  +G Y  G + +LD+A+   P +  F
Sbjct: 373 ISRLMSSIVDHDHYQYSIYIKKLISCYYKNYDIINLGVYTSGKNKLLDQAITLWPFLEKF 432

Query: 417 LKQSPSDLSSEDVFQEITK 435
           L+Q   D  + +  Q I K
Sbjct: 433 LQQKFLDCCTYN--QSILK 449


>gi|114777408|ref|ZP_01452405.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1]
 gi|114552190|gb|EAU54692.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1]
          Length = 471

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/368 (41%), Positives = 216/368 (58%), Gaps = 9/368 (2%)

Query: 72  ICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           + PVG    I+ GD +         R+ P     GRV++A G P+D       G L    
Sbjct: 76  LMPVGSTRGIAPGDPIEPLSTTPSIRVGPH--LLGRVLDAQGNPMDEYALSNLGTLFPLH 133

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +++ P   R  ++   + G+R ID   P+  GQR+G+FAG+G+GKSTLL M AR+   +
Sbjct: 134 GTRLNP-FTRHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTLLGMLARNSDAE 192

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+LVGER REVREF++  LG + L+ SVV+VATSD  P+LR  A   A TIAE F  
Sbjct: 193 VNVIALVGERSREVREFLDQALGSEALQHSVVIVATSDMPPVLRVRAAHMATTIAEAFRE 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TR A + REI    GE P ++GY  S FS L  LLER GP   + G+I
Sbjct: 253 QGKRVLLLMDSLTRVAQAQREIGLMLGEPPASKGYTPSCFSILAELLERSGPGTAQGGDI 312

Query: 308 TAVISVLVDGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +A  +VLV+GD+   DPIADS  S+LDGHI+L+R LAE+G +P ++ L S+SRL  +  +
Sbjct: 313 SAFYTVLVEGDDMRADPIADSAMSVLDGHILLDRKLAEQGHFPAINVLRSISRLDTQLMN 372

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            ++ +    L   +  FE   D+  IG Y  G +  LD  +  +  I  FL+Q+ +  S+
Sbjct: 373 NEQMQAARMLRRKMSIFERMEDMISIGAYEQGSNPELDNIIDNLQEIKGFLQQTSNSCSA 432

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 433 REDSAQRL 440


>gi|300310125|ref|YP_003774217.1| type III secretion ATP synthase [Herbaspirillum seropedicae SmR1]
 gi|300072910|gb|ADJ62309.1| type III secretion ATP synthase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 460

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 191/311 (61%), Gaps = 6/311 (1%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           ++   PPA +R R+     TG+R ID    +  GQRIGVFAG G GK+TL++  AR    
Sbjct: 150 VIRDAPPATSRPRIATPLPTGVRAIDGLLTMGMGQRIGVFAGPGCGKTTLMAAIARGCQA 209

Query: 188 DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           + ++  L+GERGRE+ EF++  L   L +K+VVV ATSD + + R  A  TA  IAE F 
Sbjct: 210 EAIVFGLIGERGRELNEFLDHELDAELIRKTVVVCATSDRTSMERSRAAFTATAIAEGFR 269

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  VLL++DS+TRFA + REI   +GE P   G+  SV++ LPRL+ER G + +  G+
Sbjct: 270 DRGMKVLLLVDSLTRFARAQREIGLAAGEPPARGGFTPSVYTMLPRLIERAGGTPQ--GS 327

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ +VLVDG++ +DPI D  +S+LDGHI+L R LAE+G YP +D LAS+SR+     S
Sbjct: 328 ITAMYTVLVDGESSSDPIGDEAKSLLDGHILLTRKLAEQGHYPAIDVLASISRVMSNVTS 387

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            + ++  S    L+ R++E   +  +G Y+ G D + D+A+   P    FL+Q   D S 
Sbjct: 388 REHRRAASRFRELLARYQEMELLIRLGEYKSGADPVADRAMELRPEQLSFLRQ---DTSG 444

Query: 427 EDVFQEITKKL 437
              FQE    L
Sbjct: 445 SADFQETLDTL 455


>gi|269139490|ref|YP_003296191.1| flagellum-specific ATP synthase [Edwardsiella tarda EIB202]
 gi|267985151|gb|ACY84980.1| flagellum-specific ATP synthase [Edwardsiella tarda EIB202]
 gi|304559379|gb|ADM42043.1| Flagellum-specific ATP synthase FliI [Edwardsiella tarda FL6-60]
          Length = 452

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/343 (41%), Positives = 202/343 (58%), Gaps = 11/343 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
              GRV++   +P+DG    D    G LS +  +     + R  + +    G+R I+   
Sbjct: 112 ALLGRVLDGSARPLDGLQPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALL 167

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG+   +
Sbjct: 168 TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGRQ 227

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE
Sbjct: 228 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 287

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 288 PPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 347

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R LAE G YP +D  AS+SR             V S   L+  ++  RD+  +G Y
Sbjct: 348 VVLSRRLAEAGHYPAIDIEASISRAMTSLIDEAHYARVRSFKQLLSSYQRNRDLISVGAY 407

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             G D +LD+A+   P +  FL+Q   + S    +Q+    LQ
Sbjct: 408 ARGSDPLLDQAIALYPQLEAFLQQGIFERSD---YQQACTALQ 447


>gi|153005077|ref|YP_001379402.1| FliI/YscN family ATPase [Anaeromyxobacter sp. Fw109-5]
 gi|152028650|gb|ABS26418.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. Fw109-5]
          Length = 434

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 192/319 (60%), Gaps = 4/319 (1%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ LG+P+DG   L        +    P  + R+R+      G+R ID    +  G
Sbjct: 99  LGRVLDGLGRPLDGL-PLPASLEEWAVDRPAPGPLARRRITAPLALGVRAIDGLLTVGEG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QRIG+FAG+G+GKSTLL   AR    +  +I LVGERGREVREF+E+ LG + L +SVVV
Sbjct: 158 QRIGIFAGAGVGKSTLLGQIARHTRAELSVICLVGERGREVREFVEEALGPEGLARSVVV 217

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            ATSD   + R  A   A  IAE+F+ +   VL +LDS+TR+A + RE+   +GE P   
Sbjct: 218 AATSDAPALERLKAAHVATGIAEWFAERDRRVLFMLDSLTRYARAQREVGLAAGEPPARH 277

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF+ LPRLLER G   + +G ITA+ +VLV G + ++PIAD VR ILDGH+VL+ 
Sbjct: 278 GYPPSVFAALPRLLERTG--NRARGGITALYTVLVAGGDLDEPIADEVRGILDGHVVLDP 335

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            +A  GRYP +D L S+SR+     +   +     L  L+   E  RD+  +G Y  G D
Sbjct: 336 RVAAAGRYPAIDVLRSLSRVMPAVTTDSHRAAADRLRALLAAHERHRDLIAVGAYARGSD 395

Query: 401 LILDKAVHQVPIIYDFLKQ 419
              D+A+ ++P I  FL+Q
Sbjct: 396 PDADEALARLPAIEAFLRQ 414


>gi|321472575|gb|EFX83544.1| hypothetical protein DAPPUDRAFT_100109 [Daphnia pulex]
          Length = 411

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/380 (40%), Positives = 216/380 (56%), Gaps = 39/380 (10%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           +H+      LG+V+    D   I P G+ E +  G  V   G   +I P+  W GRVI A
Sbjct: 54  IHKEDADPILGEVVGFRNDTSLIMPYGMLEGVRPGARVDVIGDGLKIYPTMAWKGRVIGA 113

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    L +GD + ++ S   PA  R R +K    G+R ++ FT  C GQRIG+F+
Sbjct: 114 LGEPLDDLGPLPQGDQAYDLKSSPSPARTRLRTKKRIDLGVRALNTFTTCCRGQRIGIFS 173

Query: 169 GSGIGKSTLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           GSG+GKS LL    R +DC D V++ L+GERGREV +FIE+ LG + LK++VVVVATSD 
Sbjct: 174 GSGVGKSVLLGQITRFTDC-DVVVVGLIGERGREVNDFIEEQLGPEGLKRAVVVVATSD- 231

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           +P L+                + D    +L+S                 LP   G P +V
Sbjct: 232 APALQ-------------LKERSD---FLLES-----------------LPRQEGNPPTV 258

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           FSELPRLLER G +  E G+IT + +VLV+GD+HN+PIAD+ RSILDGHIVL RS+AE G
Sbjct: 259 FSELPRLLERAGTTHHE-GSITGIFNVLVEGDDHNEPIADATRSILDGHIVLERSIAERG 317

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           RYP V+ L S+SR        +E  +VS    L+  +++  ++  +G YR G    +D+A
Sbjct: 318 RYPAVNILKSLSRTMPDCNDLEESAVVSRARKLMAIYDDMSEMIQLGTYRHGSSPEVDEA 377

Query: 407 VHQVPIIYDFLKQSPSDLSS 426
           +   P +  FL Q   + S+
Sbjct: 378 IRLFPKLSTFLSQGKEEKST 397


>gi|289548013|ref|YP_003473001.1| ATPase, FliI/YscN family [Thermocrinis albus DSM 14484]
 gi|289181630|gb|ADC88874.1| ATPase, FliI/YscN family [Thermocrinis albus DSM 14484]
          Length = 425

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 147/416 (35%), Positives = 240/416 (57%), Gaps = 11/416 (2%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           ++ ++ VY  V   +    +GD V+ +  + +  G++I ++ D   I P G    + +GD
Sbjct: 11  VTKVSGVY--VEAFNVEGAVGDRVIIKTVDGEREGEIIGLHEDRCIIMPFGSMMGVKVGD 68

Query: 86  LVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
            V   G +          G V++  G+ +     +G+  + ++ +   P  + R+R+ + 
Sbjct: 69  KVLITGEKVHTFTGDRVIGAVLDPFGRSLTDGRVVGEEKIRVDFVDVNP--LERERIREV 126

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
              G+R ++    L  GQ++GVFAG+G+GKSTLL M  R    D V+++L+GERGREVRE
Sbjct: 127 LDCGVRSVNALLTLGKGQKVGVFAGAGVGKSTLLGMITRWAQVDVVVLALIGERGREVRE 186

Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           F+ED LG +  ++SVVVV TSD++PI++    ++AV  A YF+ +G +VLLI+DS+TRFA
Sbjct: 187 FLEDVLGEEGRRRSVVVVTTSDQTPIMKVKGAISAVAHARYFAGRGKDVLLIMDSLTRFA 246

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HND 322
            + REI   +GE P  +GY  SVF    RL+E  G   +  G+IT + SVLV+GD+ H D
Sbjct: 247 MAQREIGLAAGEPPTLKGYTPSVFHMCARLVESCGKFVR-GGSITGIFSVLVEGDDLHTD 305

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+AD++  +LDGHIVL+R  A  G YP VDP+ S+SR+     + D  ++   +  ++  
Sbjct: 306 PVADALLGMLDGHIVLSRKRASSGLYPAVDPVRSLSRVMPHLVTEDHMRMALHIRDVLSV 365

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           ++   ++  +G YR G +  +DK +     I  F  Q P+++     FQE  + L+
Sbjct: 366 YDAMEEVVHVGLYRQGSNPFVDKVIKHRDEIRSFFHQ-PAEVKVS--FQESVEALR 418


>gi|320175469|gb|EFW50568.1| Flagellum-specific ATP synthase FliI [Shigella dysenteriae CDC
           74-1112]
 gi|320184479|gb|EFW59283.1| Flagellum-specific ATP synthase FliI [Shigella flexneri CDC 796-83]
 gi|332096920|gb|EGJ01909.1| flagellum-specific ATP synthase [Shigella boydii 3594-74]
          Length = 308

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 133/285 (46%), Positives = 180/285 (63%), Gaps = 1/285 (0%)

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+
Sbjct: 1   MQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLI 60

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F  +G +VLL
Sbjct: 61  GERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLL 120

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           I+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL
Sbjct: 121 IMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVL 180

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      S      V 
Sbjct: 181 TEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVR 240

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L+Q
Sbjct: 241 TFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQ 285


>gi|1648933|gb|AAB17681.1| putative ATPase [Sinorhizobium fredii]
          Length = 450

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 199/339 (58%), Gaps = 4/339 (1%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
            HW    +       GRVI++  +P+DG   +   ++   +  +VP  M R+ VE+ F  
Sbjct: 101 LHWRMREVPIGPDLLGRVIDSRCRPLDGKCEVKTTEVR-PLHGRVPNPMTRRMVERPFPL 159

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+R +D       GQRIG++   G GKSTL+S   +    D  I +L+ +RGREVREF+E
Sbjct: 160 GVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAADVFIFALICQRGREVREFVE 219

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
            +LG+  L++++VVV TSD S   R      A  +AEYF  +G  V L+LDS+TRF  ++
Sbjct: 220 RHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAM 279

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI   +GE P  RG+P SVF+ LP LLER G  E+  G+ITA  +VLV+GD   DPIA+
Sbjct: 280 REIGLAAGEPPTRRGFPPSVFAALPGLLERAGMGER--GSITAFYTVLVEGDGTGDPIAE 337

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
             R I+DGHIVL+R+LA    +P +D L S SR+ D   S   +K  S    L+ R+ E 
Sbjct: 338 ESRGIVDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSETHRKAASFFRDLLARYAEC 397

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +  +G Y+ G D + D+AV  +  + +FL+QS  ++S
Sbjct: 398 EFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVS 436


>gi|220935135|ref|YP_002514034.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996445|gb|ACL73047.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 460

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 134/341 (39%), Positives = 204/341 (59%), Gaps = 9/341 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTP 157
              GRV++  G+P+DG   L   D    +     P   + R+ + +    G+R I+    
Sbjct: 118 ALLGRVLDGAGRPLDG---LPPPDCEASVSLNGRPLNPLARRPIHEPLDVGVRAINGLLT 174

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
           +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGREV EF+++ LG + + +
Sbjct: 175 VGRGQRMGLFAGSGVGKSVLLGMMTRYTNADVTVVGLIGERGREVNEFVQNILGPEGMAR 234

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +VVV   +D  P++R    + A +IAEYF  +G NVLL++DS+TRFA + REI+   GE 
Sbjct: 235 AVVVAVPADHPPLMRLHGAMLATSIAEYFRDQGLNVLLLMDSLTRFAQAQREISLAIGEP 294

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GY  SVF+ LP L+ER G S++ +G +TA  +VL +GD+ NDPIAD+ R+ILDGH+
Sbjct: 295 PATKGYTPSVFARLPHLVERAGNSDRGEGTMTAFYTVLTEGDDQNDPIADAARAILDGHV 354

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R +AE GRYP +D  ASVSRL ++     + +       +   +++ RD+  +G Y+
Sbjct: 355 VLSRRIAEAGRYPAIDIEASVSRLMNEIADPGQIQAARLFKQIYATYQQNRDLISVGAYQ 414

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            G D  +D A+   P +  +L Q   D+     F+E  + L
Sbjct: 415 KGADPRVDAAIQYYPHLEQYLSQ---DMREAVDFKESLRAL 452


>gi|221069295|ref|ZP_03545400.1| ATPase FliI/YscN [Comamonas testosteroni KF-1]
 gi|220714318|gb|EED69686.1| ATPase FliI/YscN [Comamonas testosteroni KF-1]
          Length = 462

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 152/400 (38%), Positives = 228/400 (57%), Gaps = 25/400 (6%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------------- 93
           +HQ      L +V+    +  ++ P G  + +S G +V     F                
Sbjct: 50  IHQHGQEPVLAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVAETEKVRQ 109

Query: 94  -----RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKT 147
                R+       GRV+++ G P+D   +L +G +  E++ + P  AM+R  V +   T
Sbjct: 110 TVGVLRLPMGDGLLGRVVDSQGIPLDRGPAL-EGVVP-EVLDRNPINAMDRDPVRESLDT 167

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G++ ++    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+E
Sbjct: 168 GVKALNSLLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVE 227

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           D LG  +  ++VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + 
Sbjct: 228 DILGAQDRSRAVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQ 287

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA   GE P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD
Sbjct: 288 REIALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIAD 347

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGH+VL+R+LAE G YP +D   S SR+     S +  +L      +  R+++ 
Sbjct: 348 AARAILDGHVVLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKG 407

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           RD+  +G Y PG D  LD+A+   P +  FL+QS  + SS
Sbjct: 408 RDLVQVGAYVPGSDPQLDEAIALQPAMTGFLQQSMFESSS 447


>gi|84514813|ref|ZP_01002176.1| FliI, Flagellum-specific ATPase [Loktanella vestfoldensis SKA53]
 gi|84510972|gb|EAQ07426.1| FliI, Flagellum-specific ATPase [Loktanella vestfoldensis SKA53]
          Length = 444

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 132/328 (40%), Positives = 194/328 (59%), Gaps = 9/328 (2%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GR ++ LG P+D D    +      +   +   + R+++      G+R ++    +  
Sbjct: 104 YLGRTVDGLGWPLD-DAPAPQVSAQAPLNGTLVNPLARRQIPGPLDVGVRAVNGLLTIGC 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220
           GQRIG+ AGSG+GKS LL M AR    D V+I L+GER REV E +   +    +  V +
Sbjct: 163 GQRIGIIAGSGVGKSVLLGMMARYTSADVVVIGLIGERAREVGEMVRAIMQPATRGKVSI 222

Query: 221 VAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +A  +D SP+LR      A  +AE+F  +G NVLLI+DS+TR AH+ REI    GE P +
Sbjct: 223 IAVPADRSPLLRIRGARRATALAEHFRDQGKNVLLIMDSLTRVAHAQREIGLALGEAPTS 282

Query: 280 RGYPTSVFSELPRLLER----IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +GYP SV S +P L+ER    +GP+    G+IT + +VL DGD+ NDP+ D+ R+ILDGH
Sbjct: 283 KGYPASVISMIPNLIERAGMGVGPN---AGSITGIYTVLADGDDSNDPVVDTARAILDGH 339

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+RS+A+ G YP +D  AS+SR+ +      ++K       L+  + E RD+ L+GGY
Sbjct: 340 IVLSRSIAQMGVYPAIDIPASISRVMNDIVPLSQQKAARKFKRLVSLYNENRDLMLMGGY 399

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             G D  LD+AV   P + D++ QSP D
Sbjct: 400 VSGQDADLDQAVALWPKLVDYISQSPDD 427


>gi|195953025|ref|YP_002121315.1| ATPase, FliI/YscN family [Hydrogenobaculum sp. Y04AAS1]
 gi|195932637|gb|ACG57337.1| ATPase, FliI/YscN family [Hydrogenobaculum sp. Y04AAS1]
          Length = 425

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/343 (40%), Positives = 211/343 (61%), Gaps = 13/343 (3%)

Query: 98  SACWCGRVINALGKPIDGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           S  + G+V++  G  I  D+     SL K  LS+E  S     M R+++ K F +G+R I
Sbjct: 81  SEEFLGKVLDPFGNIIHSDNTKSVKSLKKLPLSLENHS----PMERKKISKIFDSGVRTI 136

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           +  T +  GQRIGVFAG+G+GK+T L M  +    D V+++L+GERGREVRE++ED LG+
Sbjct: 137 NALTTIGIGQRIGVFAGAGVGKTTTLGMIMKHSYSDVVVLALIGERGREVREYVEDILGE 196

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             +KSVV+V+TSD++PI++    ++A+  A +F+SKG NVLL++DS+TR A + REI  +
Sbjct: 197 AFEKSVVIVSTSDQTPIMKVKGAISALVHARFFASKGYNVLLVMDSLTRLAMAQREIGLS 256

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN-DPIADSVRSI 331
            GE P  +GY  SVF  + +++E  G        IT + SVLV+GD+ + DPIADS  S 
Sbjct: 257 VGEPPTLKGYTPSVFLTMSKIIEGCGLVGDY--GITGIFSVLVEGDDTSLDPIADSAMSF 314

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHI+L+R +A+ G YP +DPL S+SR+     S +    V     ++  +    DI  
Sbjct: 315 LDGHILLSRKIADSGIYPAIDPLKSISRIMPNIVSDEHWDYVLKFKQILSEYYSMEDIIK 374

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +G YR G +  +DK + +   I +F  Q+P + ++  +  QE+
Sbjct: 375 VGLYRKGSNPTIDKVLERKSDIDNFFMQNPKTGINYNNSLQEL 417


>gi|294636873|ref|ZP_06715203.1| flagellar protein export ATPase FliI [Edwardsiella tarda ATCC
           23685]
 gi|291089903|gb|EFE22464.1| flagellar protein export ATPase FliI [Edwardsiella tarda ATCC
           23685]
          Length = 452

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 149/380 (39%), Positives = 216/380 (56%), Gaps = 16/380 (4%)

Query: 51  HQGKNS-DNLGQVIRINLDIVYICPV----GI--GEEISLGDLVFHWGRFRISPSACWCG 103
           H G+   D   +V+  N   +++ P+    GI  G  +       H G+ ++       G
Sbjct: 57  HDGQQIIDVEAEVVGFNGRQLFLMPLEEVDGIVPGARVWAPAAALHSGK-QLPLGPALLG 115

Query: 104 RVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           RV++   +P+DG    D    G LS +  +     + R  + +    G+R I+    +  
Sbjct: 116 RVLDGSARPLDGLPPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALLTVGR 171

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG+   K+SVV
Sbjct: 172 GQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGRKRSVV 231

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           + A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  
Sbjct: 232 IAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPAT 291

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+
Sbjct: 292 KGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLS 351

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D  AS+SR             V     L+  ++  RD+  +G Y  G 
Sbjct: 352 RRLAEAGHYPAIDIEASISRAMTSLIDEAHYVRVRRFKQLLSSYQRNRDLISVGAYARGS 411

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D +LD+A+   P +  FL+Q
Sbjct: 412 DPLLDQAIALYPQLEAFLQQ 431


>gi|167842297|ref|ZP_02468981.1| type III secretion system ATPase [Burkholderia thailandensis
           MSMB43]
          Length = 445

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/371 (39%), Positives = 207/371 (55%), Gaps = 4/371 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+ I  D   + P      I+ G  V   GR  RI       GRV++ LG+  D    
Sbjct: 63  AEVVSIEGDTALLSPFAEPRGIAAGCAVRPLGRAHRIPVGTFLLGRVVDGLGRLFDHGPD 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      +++    P  + R  ++     G+R ID       GQR+G+FA +G GKSTLL
Sbjct: 123 VPDSATWVDLARSAPDPLRRAIIDTPLPLGVRAIDGLLTCGRGQRVGIFAAAGGGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
            M       D  +++L+GERGREVREF+E  L    + +++VVVATSD   + R  A  T
Sbjct: 183 GMICDGSLADVTVLALIGERGREVREFLEHTLTPEARARAIVVVATSDRPALERLKAAYT 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE+F  +G +VLL++DS+TRFA + REI   +GE P A  YP S F+ LP LLER 
Sbjct: 243 ATAIAEHFRDQGRDVLLMMDSLTRFARAAREIGLAAGEKPAAGSYPPSFFARLPGLLERA 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP+    G+IT + +VLV+GDN N+P+AD VRSILDGHIVL+R LAE   YP +D  ASV
Sbjct: 303 GPAAT--GSITGLYTVLVEGDNLNEPVADEVRSILDGHIVLSRKLAEANHYPAIDVGASV 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  +   +   + L  L   + +   +  +G YR G D   D A+ +   I  FL
Sbjct: 361 SRVMSQIVATRHRDGAARLRRLDAVYRDIELLVRVGEYRHGADPEADDALARREAIRQFL 420

Query: 418 KQSPSDLSSED 428
            QS +D +S D
Sbjct: 421 CQSVTDKTSFD 431


>gi|62199646|gb|AAX76920.1| EsaN [Edwardsiella tarda]
          Length = 438

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 208/342 (60%), Gaps = 9/342 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+ I  D   + P      ++ G LV   G + RI       GRVI+ALG+P+DG   
Sbjct: 59  AEVVAIEGDQALLSPYHAPLGLANGMLVTPSGAQARIGVGEALLGRVIDALGQPMDGSAP 118

Query: 119 LGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                  S+E  S  P  M R  ++     G+R ID    +  GQR+G+F+ +G GKSTL
Sbjct: 119 PQAAQWRSLE--SPAPDPMQRAPIDTLLPMGVRAIDAALSVGVGQRLGIFSPAGCGKSTL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M A     D V+++L+GERGREVREFIE  +   L+ +SVV++ATSD   + R  A  
Sbjct: 177 LGMLAAHSQVDVVVLALIGERGREVREFIEQIISPELRARSVVILATSDRPALERIKAAD 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +VLL++DS+TR+A +IREIA  +GE  V+ GYP S+++ LPRLLER
Sbjct: 237 TATVIAEYFRDRGHHVLLLVDSLTRYARAIREIALAAGEPMVSGGYPPSLYARLPRLLER 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            GP+    G+ITA  +VLV  +  +DP+A+ VRS+LDGHIVL+R LAE   YP +D LAS
Sbjct: 297 AGPA--ACGSITAFYTVLV--EQKSDPLAEEVRSLLDGHIVLSRRLAEASHYPAIDILAS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +SR+  +  +   ++  + L HL+  ++E   +  +G YR G
Sbjct: 353 ISRVMSQVVTPQHRQAANRLRHLLATWQEIALLVRVGEYRAG 394


>gi|85858820|ref|YP_461022.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB]
 gi|85721911|gb|ABC76854.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB]
          Length = 455

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/324 (42%), Positives = 200/324 (61%), Gaps = 7/324 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFT 156
           A   GRVI+ +G PID   + G  D   E      P   + R R+      G++V++   
Sbjct: 109 AGLLGRVIDGVGNPID---NRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKVLNGLF 165

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
               GQR+G+FAGSG+GKS L+ M AR+   D  +I L+GERGREVREF+E  LG + L 
Sbjct: 166 SCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLA 225

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVVVVA SD  P++R  A   A T++EYF  +G +VLL++DS+TRFA + REI  + GE
Sbjct: 226 RSVVVVAASDMHPLIRMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGE 285

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GY  SVFS LP+LLER G  E  +G+IT + ++LV+GD+ N+PI+D+ RSILDGH
Sbjct: 286 PPTTKGYTPSVFSLLPKLLERAGKVEG-RGSITGLYTILVEGDDFNEPISDAARSILDGH 344

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           + L+R LA +  YP VD L S+SR+     S   + + + +  +I   ++  ++  IG Y
Sbjct: 345 LYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELINIGAY 404

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
             G +  +D A+  +  + DFL+Q
Sbjct: 405 VHGSNAEIDYAIRMIDKVNDFLRQ 428


>gi|124516308|gb|EAY57816.1| flagellar protein export ATPase FliI [Leptospirillum rubarum]
          Length = 462

 Score =  246 bits (627), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 150/398 (37%), Positives = 229/398 (57%), Gaps = 31/398 (7%)

Query: 51  HQGKNSDNLGQVIR---INLDIVYICPVGIGEEISLGDLVFHWGRFRISP---------- 97
            +G   + +G +I    I L I  IC +G    ++   + F  GR  + P          
Sbjct: 34  REGAVVEGIGLMIEARGIELGIGEICSIGSDPPVAAEVVGFREGRSLLMPLGELRGIRPG 93

Query: 98  --SAC------------WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
              AC            + GRV++ +G  +DG     +G + + +  +    + R+RV+ 
Sbjct: 94  LSVACREKRPQAWVSEQFLGRVLDPMGHALDGGAD-PEGAVPVPLYGEPVNPLVRRRVDS 152

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
              T +R ++    L  GQ++G+FAG+G+GKSTLL M AR    D  +++L+GERGREVR
Sbjct: 153 VLDTRVRALNALLTLGQGQKVGLFAGAGVGKSTLLGMMAREADVDVSVVALIGERGREVR 212

Query: 204 EFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           EF+E  LG+  L +SVVVV+T D+  +LR    L A+++AEYF  +  +VL ++DS+TRF
Sbjct: 213 EFLERDLGEEGLSRSVVVVSTGDQPSLLRVRGALFAMSVAEYFRKQNRSVLFVMDSLTRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHN 321
           A ++REI   +GE P ARGY  SVF++LPR +ER G  E E G+IT + +VLV+G D  +
Sbjct: 273 AMALREIGLATGEPPTARGYTPSVFAQLPRFVERAGGIEGE-GSITGLYTVLVEGADMTS 331

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DP++D++ +ILDGHI+L+R LA EG YP VD L S SR+         + L ++      
Sbjct: 332 DPLSDALAAILDGHILLSRDLAAEGIYPSVDLLHSRSRVMPVIADPHHRALAATFLRYES 391

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + ++ D+  +G Y PG+D  LD+AV   P + +FL Q
Sbjct: 392 LYRKSEDLIRVGAYVPGMDPELDQAVSLHPRMMEFLSQ 429


>gi|19749325|gb|AAL98695.1| Y4yI [Sinorhizobium fredii]
          Length = 346

 Score =  245 bits (626), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 196/324 (60%), Gaps = 4/324 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI++  +P+DG   +   ++   +  +VP  M R+ VE+ F  G+R +D       GQ
Sbjct: 12  GRVIDSRCRPLDGKCEVKTTEVR-PLHGRVPNPMTRRMVERPFPLGVRALDGLLTCGEGQ 70

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           RIG++   G GKSTL+S   +    D  I +L+ +RGREVREF+E +LG+  L++++VVV
Sbjct: 71  RIGIYGEPGGGKSTLISQIVKGAAADVFIFALICQRGREVREFVERHLGEEGLRRAIVVV 130

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
            TSD S   R      A  +AEYF  +G  V L+LDS+TRF  ++REI   +GE P  RG
Sbjct: 131 ETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRG 190

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           +P SVF+ LP LLER G  E+  G+ITA  +VLV+GD   DPIA+  R I+DGHIVL+R+
Sbjct: 191 FPPSVFAALPGLLERAGMGER--GSITAFYTVLVEGDGTGDPIAEESRGIVDGHIVLSRA 248

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA    +P +D L S SR+ D   S   +K  S    L+ R+ E   +  +G Y+ G D 
Sbjct: 249 LAARSHFPAIDVLQSRSRVMDAVVSETHRKAASFFRDLLARYAECEFLINVGEYKQGGDP 308

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425
           + D+AV  +  + +FL+QS  ++S
Sbjct: 309 LTDRAVASIGELKEFLRQSEDEVS 332


>gi|120613028|ref|YP_972706.1| flagellar protein export ATPase FliI [Acidovorax citrulli AAC00-1]
 gi|120591492|gb|ABM34932.1| flagellar protein export ATPase FliI [Acidovorax citrulli AAC00-1]
          Length = 474

 Score =  245 bits (626), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 150/383 (39%), Positives = 219/383 (57%), Gaps = 23/383 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC------------------ 100
           L +V+  + D  ++ P G    +S G  V     +   P  C                  
Sbjct: 72  LAEVVGFSGDRAFLMPAGDIHGLSSGASVVPAAPYVPVPRLCDSTRPSTAAGILRLPVGD 131

Query: 101 -WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPL 158
              GRV+++ G P+D    +   D+S E M +    AM+R  V +   TG+R I+    +
Sbjct: 132 GLLGRVVDSQGLPLDHGGPVQ--DVSSEPMDRRQINAMDRDPVRQMLDTGVRAINALLTV 189

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKS 217
             GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED LG+ + +++
Sbjct: 190 GRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGEQDRERA 249

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + REIA   GE P
Sbjct: 250 VVVAAPADAPPLLRMQGAAYATAIAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEPP 309

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIV
Sbjct: 310 ATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADSARAILDGHIV 369

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R+LAE G +P +D   S SR+     S +   L      +  R++++RD+  +G Y  
Sbjct: 370 LSRALAETGHFPAIDIEQSASRVMHNVASREHFDLARRFRAVYSRYQKSRDLIQVGAYMS 429

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
           G D  LD+A+   P +  FL+Q+
Sbjct: 430 GSDPALDEAIRLQPAMAAFLQQN 452


>gi|121596091|ref|YP_987987.1| flagellar protein export ATPase FliI [Acidovorax sp. JS42]
 gi|120608171|gb|ABM43911.1| flagellar protein export ATPase FliI [Acidovorax sp. JS42]
          Length = 455

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/385 (38%), Positives = 216/385 (56%), Gaps = 25/385 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV---------FHWGRFRISPSAC--------- 100
           L +V+    D  Y+ P G    +S G  V          H G   +  +           
Sbjct: 52  LAEVVGFAGDTAYLMPAGDIHGLSSGASVMPAPAYVPALHLGAAPVEEAGAGVGALLLPM 111

Query: 101 ---WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFT 156
                GRV+++ G P+D    L +  ++ + M + P  AM R  V +   TG+R I+   
Sbjct: 112 GDGLLGRVVDSQGNPLDHAGPLAQ--VTAQPMDRRPINAMERDPVREPLDTGVRAINALL 169

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED LG  +  
Sbjct: 170 TVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGVQDRG 229

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + REIA   GE
Sbjct: 230 RAVVVAAPADAPPLLRMQGAAYATAIAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGE 289

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGH
Sbjct: 290 PPATKGYPPSCFAKLPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGH 349

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+R+LAE G YP +D   S SR+          +L      +  R++++RD+  +G Y
Sbjct: 350 IVLSRALAESGHYPAIDIEQSASRVMHNVVPRAHFELARGFRAVYSRYQKSRDLIQVGAY 409

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
             G D  LD+A+   P +  FL+QS
Sbjct: 410 MSGSDPQLDEAIRLQPGMTAFLQQS 434


>gi|206603151|gb|EDZ39631.1| Flagellum-specific ATP synthase FliI [Leptospirillum sp. Group II
           '5-way CG']
          Length = 462

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/324 (41%), Positives = 204/324 (62%), Gaps = 4/324 (1%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S  + GRV++ +G  +DG     +G + + +  +    + R+RV+    T +R ++    
Sbjct: 108 SEQFLGRVLDPMGHALDGGAD-PEGAVPVPLYGEPVNPLVRRRVDSVLDTRVRALNALLT 166

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKK 216
           +  GQ++G+FAG+G+GKSTLL M AR    D  +++L+GERGREVREF+E  LG+  L +
Sbjct: 167 MGQGQKVGLFAGAGVGKSTLLGMMAREADVDVSVVALIGERGREVREFLERDLGEEGLSR 226

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVVVV+T D+  +LR    L A+++AEYF  +  NVL ++DS+TRFA ++REI   +GE 
Sbjct: 227 SVVVVSTGDQPSLLRVRGALFAMSVAEYFRKQNRNVLFVMDSLTRFAMALREIGLATGEP 286

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSILDGH 335
           P ARGY  SVF++LPR +ER G  E E G+IT + +VLV+G D  +DP++D++ +ILDGH
Sbjct: 287 PTARGYTPSVFAQLPRFVERAGGLEGE-GSITGLYTVLVEGADMTSDPLSDALAAILDGH 345

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I+L+R LA EG YP VD   S SR+      A  + L  +       + ++ D+  +G Y
Sbjct: 346 ILLSRDLAAEGIYPSVDLPHSRSRVMPVIADAHHRALAGTFLRYESLYRKSEDLIRVGAY 405

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
            PG D  LD+AV   P + +FL Q
Sbjct: 406 VPGTDPELDQAVSLHPRMMEFLSQ 429


>gi|293395600|ref|ZP_06639883.1| flagellum-specific ATP synthase FliI [Serratia odorifera DSM 4582]
 gi|291421919|gb|EFE95165.1| flagellum-specific ATP synthase FliI [Serratia odorifera DSM 4582]
          Length = 453

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/330 (41%), Positives = 198/330 (60%), Gaps = 2/330 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++   KP+DG  +   G  +    +   P + R  + +    G+R I+    + 
Sbjct: 114 ALLGRVLDGSAKPLDGLPAPDTGYRAPLFTAPFNP-LQRTPIAQVLDVGVRTINGLLTVG 172

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG   + +SV
Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAAGRARSV 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL
Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LAE G YP +D  AS+SR        +  + V +   ++  ++  RD+  +G Y  G
Sbjct: 353 SRRLAEAGHYPAIDIEASISRAMTALIDDEHYRRVRNFKQMLASYQRNRDLISVGAYAAG 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            D +LDKA+   P +  +L+Q   + S  D
Sbjct: 413 SDPLLDKAMTLYPQMEAYLQQGIFERSGYD 442


>gi|269138233|ref|YP_003294933.1| type III secretion system ATPase [Edwardsiella tarda EIB202]
 gi|61743018|gb|AAX55238.1| EsaN [Edwardsiella tarda]
 gi|267983893|gb|ACY83722.1| type III secretion system ATPase [Edwardsiella tarda EIB202]
 gi|304558276|gb|ADM40940.1| EsaN [Edwardsiella tarda FL6-60]
          Length = 438

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 208/342 (60%), Gaps = 9/342 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+ I  D   + P      ++ G LV   G + RI       GRVI+ALG+P+DG   
Sbjct: 59  AEVVAIEGDQALLSPYHAPLGLANGMLVTPSGAQARIGVGEALLGRVIDALGQPMDGCAP 118

Query: 119 LGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                  S+E  S  P  M R  ++     G+R ID    +  GQR+G+F+ +G GKSTL
Sbjct: 119 PQAAQWRSLE--SPAPDPMQRAPIDTLLPMGVRAIDAALSVGVGQRLGIFSPAGCGKSTL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M A     D V+++L+GERGREVREFIE  +   L+ +SVV++ATSD   + R  A  
Sbjct: 177 LGMLAAHSQVDVVVLALIGERGREVREFIEQIMSPELRARSVVILATSDRPALERIKAAD 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +VLL++DS+TR+A +IREIA  +GE  V+ GYP S+++ LPRLLER
Sbjct: 237 TATVIAEYFRDRGHHVLLLVDSLTRYARAIREIALAAGEPMVSGGYPPSLYARLPRLLER 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            GP+    G+ITA  +VLV  +  +DP+A+ VRS+LDGHIVL+R LAE   YP +D LAS
Sbjct: 297 AGPA--ACGSITAFYTVLV--EQKSDPLAEEVRSLLDGHIVLSRRLAEASHYPAIDILAS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +SR+  +  +   ++  + L HL+  ++E   +  +G YR G
Sbjct: 353 ISRVMSQVVTPQHRQAANRLRHLLATWQEIALLVRVGEYRAG 394


>gi|304311665|ref|YP_003811263.1| Type III secretion system ATPase [gamma proteobacterium HdN1]
 gi|301797398|emb|CBL45618.1| Type III secretion system ATPase [gamma proteobacterium HdN1]
          Length = 434

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/365 (41%), Positives = 209/365 (57%), Gaps = 8/365 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           L + + I   I  + P+G  E +S   LV    G   +       GRV+++ G P+DG  
Sbjct: 54  LAEAVGIKHHITLLNPLGTMEGVSNTMLVEVIEGASTVPVGRELLGRVLDSQGLPLDGKP 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                     I +  P  M R  V+K F TG++ ID    L  GQR G+FA +G GKSTL
Sbjct: 114 P-PNCAHRAAIYAAAPDPMKRLPVDKAFSTGVQAIDSMLTLGLGQRAGIFAMAGGGKSTL 172

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D  ++ L+GERGREVREFI++ LG + L KSVV+V+TSD   + R    L
Sbjct: 173 LGMLARGSESDVNVVVLIGERGREVREFIDESLGAEGLAKSVVLVSTSDRPALERCRVAL 232

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAEYF  KG  VLL++DS+TR+A ++R+I    GE PV RG+  SVFS+LPRL ER
Sbjct: 233 VGTAIAEYFRDKGLRVLLMMDSVTRYARALRDIGLALGEPPVRRGFTPSVFSQLPRLFER 292

Query: 297 IGPSEKEKGNITAVISVLVDGDNHN--DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
            G    EKG IT + +VL + D H+  DP+ + VRS+LDGHIVL+R LA    YP +D L
Sbjct: 293 AG--NNEKGYITGIYTVLAE-DEHDGEDPVTEEVRSLLDGHIVLSRKLAAAAHYPAIDVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS SR+     + + ++  + +  L+ +++E   +  +G Y+ G D   D A+   P+I 
Sbjct: 350 ASASRVMHNVTTPEHRQKAARVRALMSKYKEVELLLQVGEYKKGTDGQADDAIRAAPMIG 409

Query: 415 DFLKQ 419
             LKQ
Sbjct: 410 GLLKQ 414


>gi|319764512|ref|YP_004128449.1| flagellar protein export atpase flii [Alicycliphilus denitrificans
           BC]
 gi|330826728|ref|YP_004390031.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans
           K601]
 gi|317119073|gb|ADV01562.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans
           BC]
 gi|329312100|gb|AEB86515.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans
           K601]
          Length = 467

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/340 (41%), Positives = 207/340 (60%), Gaps = 4/340 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149
           G  R+       GRV+++ G+P+D    L +  ++   M + P  AM R  V +   TG+
Sbjct: 117 GVLRLPMGDGLLGRVVDSQGQPLDHGGPLER--VTALPMDRSPINAMERDPVREPLDTGV 174

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED 
Sbjct: 175 RAINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDI 234

Query: 210 LGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG+  + ++VVV A +D  P+LR      A  IAE+F  +G +VLL++DS+TR+A + RE
Sbjct: 235 LGETDRGRAVVVAAPADAPPLLRMQGAAYATAIAEHFRDQGRHVLLLMDSLTRYAMAQRE 294

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA   GE P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD+ 
Sbjct: 295 IALAIGEPPATKGYPPSCFAKLPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAA 354

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+R+LAE G YP +D   S SR+     S     +      +  R++++RD
Sbjct: 355 RAILDGHIVLSRALAESGHYPAIDIEQSASRVMHNVVSRSHFDMARGFRAIYSRYQKSRD 414

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  +G Y  G D +LD+A+   P +  FL+Q   + +S D
Sbjct: 415 LIQVGAYMSGSDPLLDEAIRLQPGMTAFLQQDMFEAASMD 454


>gi|168334547|ref|ZP_02692703.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 432

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/363 (39%), Positives = 213/363 (58%), Gaps = 6/363 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           L +V+      + + P+G    I  G  V   G +  I       G+V++    P+DG  
Sbjct: 54  LAEVVGFREKNILLMPLGNNSGIGPGCPVISNGQKITIKVDESLLGKVVDWRANPLDGTP 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +  K   S+ I    P  + R+R+      GI+ ID    +  GQR+G+FAGSG+GKSTL
Sbjct: 114 NRCK--FSVPIEQDAPDPLKRKRIASQMVLGIKAIDGMLSIGSGQRMGIFAGSGVGKSTL 171

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236
           + M AR+   D  +I+L+GERGREVREF+E  L +  L +S+VVVATSD+  ++R  A  
Sbjct: 172 MGMIARNAISDINVIALIGERGREVREFLEKDLKEAGLARSIVVVATSDQPALIRLKAAK 231

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G  VL ++DS+TRF+ + REI  + GE PV+RGY  SVF  +P+LLER
Sbjct: 232 TATAIAEYFRDQGKQVLFLMDSLTRFSMAQREIGLSIGEPPVSRGYTPSVFGVMPKLLER 291

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G    E G IT + +VLVDGD+ N P+ D+ R ILDGHI+L+R +A    YP +D LAS
Sbjct: 292 TG--NNEIGGITGLYTVLVDGDDFNXPVTDTARGILDGHIMLSRKIAHRAHYPAIDVLAS 349

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     SA+ ++L + +   +  + +  D+  +G Y  G +  +D A+ ++  I  F
Sbjct: 350 ISRVMGDVISAEHRELATIIKRHMAVYADVEDLINVGAYNRGSNPEIDAAIDKMGAINAF 409

Query: 417 LKQ 419
           L Q
Sbjct: 410 LTQ 412


>gi|312958824|ref|ZP_07773343.1| type III secretion system rscN [Pseudomonas fluorescens WH6]
 gi|311286594|gb|EFQ65156.1| type III secretion system rscN [Pseudomonas fluorescens WH6]
          Length = 452

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/409 (39%), Positives = 238/409 (58%), Gaps = 15/409 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G I  ++ +   + C      +GD   V +    D L ++I  +     +  +G  
Sbjct: 26  VTARGRIQRVSGML--LQCRLPQARIGDLCRVEKNPGDDMLAEIIGFDQQDAVLSALGNL 83

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL----SMEIMSKVP 133
           E + +G  V   G   R+  S    G+V++  G+PI GD      D     +  ++ + P
Sbjct: 84  EGVRVGASVERLGVPHRVQVSDELLGQVLDGFGRPIAGDGPSAFADAQASDATPVLCEAP 143

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               R R+ +   TG+R ID    L  GQR+G+FAG+G GK+TLL+  AR+   D ++  
Sbjct: 144 LPTERPRINRALATGVRSIDGLITLGEGQRVGLFAGAGCGKTTLLAEIARNVECDVIVFG 203

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGRE+REF++  L D L+ K+V+V ATSD S + R  A  TA  +AE F  KG  V
Sbjct: 204 LIGERGRELREFLDHELDDQLRAKAVLVCATSDRSSMERARAAFTATALAEGFRRKGQRV 263

Query: 253 LLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           LL++DS+TRFA + REI   +GE P+ RG  P SV+S LPRL+ER G + +  G ITA+ 
Sbjct: 264 LLLIDSLTRFARAQREIGLAAGE-PLGRGGLPPSVYSLLPRLVERAGLTRE--GVITAIY 320

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP VD LAS+SR L++ A SAD +
Sbjct: 321 TVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAVDVLASLSRILSNVARSADIQ 380

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              ++L  L+  +++   +  +G Y+PG D + D AV     +  FL+Q
Sbjct: 381 A-GTALRRLLSAYQQIELMLKLGEYQPGSDALTDLAVDSRQAVDGFLRQ 428


>gi|326319068|ref|YP_004236740.1| flagellar protein export ATPase FliI [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375904|gb|ADX48173.1| flagellar protein export ATPase FliI [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 474

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 204/331 (61%), Gaps = 4/331 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149
           G  R+       GRV+++ G P+D    +   D+S E M +    AM+R  V +   TG+
Sbjct: 123 GILRLPMGDGLLGRVVDSQGLPLDHGGPVQ--DVSSEPMDRRQINAMDRDPVREMLDTGV 180

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED 
Sbjct: 181 RAINALLSVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDI 240

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           LG+ + +++VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + RE
Sbjct: 241 LGEQDRERAVVVAAPADAPPLLRMQGAAYATAIAEHFRDKGKHVLLLMDSLTRYAMAQRE 300

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA   GE P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIADS 
Sbjct: 301 IALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADSA 360

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           R+ILDGHIVL+R+LAE G +P +D   S SR+     S +   L      +  R++++RD
Sbjct: 361 RAILDGHIVLSRALAETGHFPAIDIEQSASRVMHNVASREHFDLARRFRAVYSRYQKSRD 420

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +G Y  G D  LD+A+   P +  FL+Q
Sbjct: 421 LIQVGAYMSGSDPALDEAIRLQPAMAAFLQQ 451


>gi|222112247|ref|YP_002554511.1| ATPase flii/yscn [Acidovorax ebreus TPSY]
 gi|221731691|gb|ACM34511.1| ATPase FliI/YscN [Acidovorax ebreus TPSY]
          Length = 467

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 199/320 (62%), Gaps = 4/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+++ G P+D    L +  ++ + M + P  AM R  V +   TG+R I+    +  G
Sbjct: 129 GRVVDSQGNPLDHAGPLTQ--VTAQPMDRSPINAMERDPVREPLDTGVRAINALLTVGRG 186

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED LG  +  ++VVV
Sbjct: 187 QRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGVQDRGRAVVV 246

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 247 AAPADAPPLLRMQGAAYATAIAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGEPPATK 306

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 307 GYPPSCFAKLPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSR 366

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +LAE G YP +D   S SR+          +L      +  R++++RD+  +G Y  G D
Sbjct: 367 ALAESGHYPAIDIEQSASRVMHNVVPRAHFELARGFRAVYSRYQKSRDLIQVGAYMSGSD 426

Query: 401 LILDKAVHQVPIIYDFLKQS 420
             LD+A+   P +  FL+QS
Sbjct: 427 PQLDEAIRLQPGMTAFLQQS 446


>gi|167841193|ref|ZP_02467877.1| hypothetical protein Bpse38_31253 [Burkholderia thailandensis
           MSMB43]
          Length = 449

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/392 (39%), Positives = 225/392 (57%), Gaps = 11/392 (2%)

Query: 51  HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINAL 109
           H G +   LG+V+ +  +   +  +G    +    LV       R+       GRV++ L
Sbjct: 54  HFGSDERVLGEVVGLTRETALVTLLGDVAGLGTSTLVRPCVDSHRVCVGTGLLGRVLDGL 113

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+DG  +L  G  +    +  PP + R  +    +TGIR ID F  +  GQRIG+FA 
Sbjct: 114 GRPLDGGPAL-DGMAARPSAAAPPPPLTRPLIRAILQTGIRAIDGFLTMGRGQRIGIFAP 172

Query: 170 SGIGKSTLLSMFARSDCFDKV-IISLVGERGREVREFIEDYLGDNLKKS-VVVVATSDES 227
           +G GKSTLL M AR+     V +++L+GERGREVREF+++ L    ++S VVV ATSD  
Sbjct: 173 AGAGKSTLLGMMARNMASGTVCVVALIGERGREVREFLDEILSVTQRQSTVVVAATSDRP 232

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA TIAEYF  +G +VLL+ DS+TRFA ++RE    +GE  V RGYP SVF
Sbjct: 233 SMERIKAAYTATTIAEYFRDEGYDVLLLCDSVTRFARAMRETGLAAGEPAVRRGYPPSVF 292

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP L+ER GP+  + GNITA+ +VL++     DPI + +RS+LDGHIVL+  LA  G 
Sbjct: 293 AALPGLVERAGPA--KNGNITALYTVLLEDAEITDPIGEEIRSLLDGHIVLSPKLASAGH 350

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  +S+SR+  +       +  +     I R+++   +  IG YR G D +LD A+
Sbjct: 351 YPAIDIRSSISRVMPQLVDFTTARAAARCREWIARYDDAELLLQIGEYRDGGDPVLDSAI 410

Query: 408 HQVPIIYDFLKQSPSDLSSEDV-FQEITKKLQ 438
                + DFLKQ     + E V  +E T +L+
Sbjct: 411 AAHGDLADFLKQG----TRESVPIEETTMRLR 438


>gi|218507231|ref|ZP_03505109.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
          Length = 362

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/165 (70%), Positives = 133/165 (80%)

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P+ARGYP SVF+ELPRLLER GP  +  G ITA+IS+LVDGDNHNDPIADS R ILD
Sbjct: 1   GEPPIARGYPASVFTELPRLLERAGPGPEGAGTITAIISILVDGDNHNDPIADSTRGILD 60

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL RSLAEEGRYPP+DPLAS+SRLA KAW+ D++KLVS L  LIHRFEETRD+RLIG
Sbjct: 61  GHIVLQRSLAEEGRYPPIDPLASISRLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIG 120

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           GYR G D  LD AV QVPIIYD LKQ+P D  S D F ++  + +
Sbjct: 121 GYRQGADPDLDMAVKQVPIIYDVLKQAPGDRESVDAFADLAGRAE 165


>gi|307947529|ref|ZP_07662862.1| type III secretion ATP synthase HrcN [Roseibium sp. TrichSKD4]
 gi|307769347|gb|EFO28575.1| type III secretion ATP synthase HrcN [Roseibium sp. TrichSKD4]
          Length = 444

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 240/422 (56%), Gaps = 18/422 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G ++ I+ V  T     + V +GD   ++ +        +V+ IN     + P+G  E +
Sbjct: 26  GKLTDISPVRLTADI--EGVAIGDICEMIDRETGYTGFARVVSINTGTAILAPLGAIEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA----M 136
           S G  V   G  F  +      G +++ LG+P++   S    D    +  ++ P     +
Sbjct: 84  SAGAEVIPTGEDFTFTCGDGLLGSMLDGLGRPLETGFSTSGSDW---VKRRISPTQINPL 140

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R  ++  F++G++ ID    L  GQRIG+F   G GKSTL+   AR+   D  +++++G
Sbjct: 141 SRPPIDTVFESGVKAIDGLNTLGEGQRIGLFGDPGSGKSTLMGSLARNCNADVCVLAMIG 200

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREF+E  L    + +SVV+ +TSD   + R +    A +IAEYF  +G +VLL+
Sbjct: 201 ERGREVREFMERQLPPAFRSRSVVIASTSDSPAMQRILGGYIATSIAEYFRDQGKSVLLL 260

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
            DS+TRFA ++RE+   +GE  V RG+  SV++ELPRL+ER G  + ++G+ITA+ +VL 
Sbjct: 261 FDSVTRFARALREVGLAAGEAAVRRGFTPSVYAELPRLIERCG--KTDRGSITAIYTVLT 318

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + +  +DPIA+ VRSI DGHI+L+  LA  GRYP +D L S SRL ++  + +  +  S 
Sbjct: 319 ENEGLDDPIAEEVRSITDGHIILSSELAHSGRYPAIDVLQSRSRLMNEIVTPEHIQASSK 378

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           +  L+ +F E   +  +G Y+ G D + D+A+ +   I  FL Q+  D ++   + EI +
Sbjct: 379 VRMLMSKFLEIELLLQVGEYKEGADPVADEAIAKREQIAQFLTQNSHDGAA---YPEILE 435

Query: 436 KL 437
           +L
Sbjct: 436 QL 437


>gi|225849151|ref|YP_002729315.1| flagellum-specific ATP synthase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643237|gb|ACN98287.1| flagellum-specific ATP synthase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 437

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 208/322 (64%), Gaps = 5/322 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             G +++  GKP++ ++        +++ S  P  + R+R+++    G++VI+    +  
Sbjct: 90  LLGSILDPFGKPLNRENINYSNSYYLKLESINP--LERERIKEVLDVGVKVINALITIGK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQR+G+ A +G+GKSTLL M AR    D  +I+L+GERGREV+EFIED LG+  LKKSVV
Sbjct: 148 GQRVGILAPAGVGKSTLLGMIARYTDADVNVIALIGERGREVKEFIEDNLGEEGLKKSVV 207

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD SP+ +  A LT++TIA+YFS KG NVL +LDS+TR A + REI  ++GE P  
Sbjct: 208 VVATSDMSPLAKIRAVLTSLTIAKYFSDKGKNVLYLLDSLTRVAMAQREIGLSAGEPPTT 267

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338
           +GY  SVF+ +P+++E+ G + K KG+IT + +VL++G+    DP+AD+  S LDGHI L
Sbjct: 268 KGYTPSVFTLMPKIIEQAG-NFKGKGSITGIYTVLIEGEEISTDPVADAAVSFLDGHIFL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R +A +  YP VD L S+SRL  +  + +       + +L  ++ +  D+  +G Y+ G
Sbjct: 327 SRQIANKRIYPAVDILKSISRLMPQLVNDEIMNYQRIIINLESKYRDMEDMINLGLYKEG 386

Query: 399 VDLILDKAVHQVPIIYDFLKQS 420
               +D A+   PII DF++QS
Sbjct: 387 SSKEIDIAIKMHPIIEDFIRQS 408


>gi|148554211|ref|YP_001261793.1| FliI/YscN family ATPase [Sphingomonas wittichii RW1]
 gi|148499401|gb|ABQ67655.1| ATPase, FliI/YscN family [Sphingomonas wittichii RW1]
          Length = 432

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 197/326 (60%), Gaps = 4/326 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ALG PIDG   +   +    +  +    ++R RV + F  G+R I+      
Sbjct: 92  TLLGRVMDALGNPIDGLGPIATAE-RWPLAGRRGNPLDRARVTEPFDMGVRAINALLTAG 150

Query: 160 HGQRIGVFAGSGIGKSTLLS-MFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKS 217
            GQRI + AGSG+GKS L+  M A +D  D +++ LVGER REV +F+   L G   +KS
Sbjct: 151 VGQRIAIAAGSGVGKSVLMGQMIAGADA-DIIVVGLVGERSREVSDFLATKLAGPVRQKS 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV   +D  P+LR  A + A  IAEYF ++G  VLL++DS+TR AH+ REI  + GE P
Sbjct: 210 VVVAVPADHPPVLRLRAAMRATAIAEYFRAQGKRVLLLIDSLTRVAHAQREIGLSLGEPP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP S    +PRL+ER G      G+ITA+ +VL DGD+ +DPI D+ R+I+DGHI+
Sbjct: 270 TMKGYPPSALGLIPRLIERAGVDAHSGGSITALYTVLADGDDTDDPIVDTARAIVDGHII 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+RSLAE+G +P +D   S+SR+     + + ++    L  L   +EE RD+ L+G YR 
Sbjct: 330 LSRSLAEQGVFPAIDVGKSLSRVMSDIVTPEHQQAAQILRRLWAVYEENRDLILMGAYRA 389

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423
           G D I+D A+ +   I +F+ Q   D
Sbjct: 390 GSDPIVDVAIARHDHILEFISQGQKD 415


>gi|303326611|ref|ZP_07357053.1| flagellar protein export ATPase FliI [Desulfovibrio sp. 3_1_syn3]
 gi|302862599|gb|EFL85531.1| flagellar protein export ATPase FliI [Desulfovibrio sp. 3_1_syn3]
          Length = 498

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/297 (46%), Positives = 188/297 (63%), Gaps = 3/297 (1%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  P  + R R+      G+R I+    L  GQR+G+ AGSG+GKSTL+ M AR    
Sbjct: 166 IYADPPSPLQRPRITDILDVGVRSINSLLTLGKGQRVGIMAGSGVGKSTLMGMMARYTRA 225

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREV EF+E  LG + + +SV+V+ATSD+SP++R  A   A  +AEYF 
Sbjct: 226 DVNVIALIGERGREVVEFMERDLGPEGMARSVLVIATSDQSPLVRMRAAYAATAVAEYFR 285

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG +VLL++DS+TRFA + RE+    GE P  +GY  SVF++LP+LLER G S K  G 
Sbjct: 286 DKGMDVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPSVFAQLPKLLERAGRSAK--GT 343

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLVDGD+ N+PIADSVRSILDGHIVL R LA++G +P +D L S+SRL      
Sbjct: 344 ITGIYTVLVDGDDFNEPIADSVRSILDGHIVLTRDLADQGHFPAIDVLRSISRLRSDICQ 403

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            ++      +T  +  F    D+  IG Y  G +  +D+A+  +P I  FL Q   D
Sbjct: 404 REDVLAGRVITRRMSTFRRVEDMVNIGAYARGSNAEIDEAIAAMPDINAFLCQDVGD 460


>gi|256259398|gb|ACU65035.1| HrcN [Pseudomonas syringae pv. syringae]
          Length = 390

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/391 (37%), Positives = 219/391 (56%), Gaps = 22/391 (5%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           L +++    D   +  +G  E I  G  +   G    +S      G V++  G+ +DG  
Sbjct: 2   LAEIVGFTEDCALLSALGTPEGIEQGARIEPLGVSHSVSVDDSLLGSVLDGFGRRLDGQ- 60

Query: 118 SLGKGDLSME---------IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
             G G  ++          I   +PP   R R+     TG+R ID    L  GQR+G+FA
Sbjct: 61  --GDGAFALPGEHRPTQPVICDAIPPT-QRPRIADAMPTGLRAIDAAITLGEGQRVGLFA 117

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ +SV+V ATSD S
Sbjct: 118 GAGCGKTTLLAELARNMPCDVIVFGLIGERGRELREFLDHELDDELRARSVLVCATSDRS 177

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSV 286
            + R  A  T   IAE +   G  VLL++DS+TRFA + REI   +GE P+ RG  P SV
Sbjct: 178 SMERARAAFTTTAIAEAYRQSGKRVLLLIDSLTRFARAQREIGIAAGE-PLGRGGLPPSV 236

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           ++ LPRL+ER G SE+  G+ITA+ +VL++ D+ NDP+AD VRS++DGHIV++R LAE G
Sbjct: 237 YTLLPRLVERAGRSEQ--GSITAIYTVLIEQDSMNDPVADEVRSLIDGHIVMSRKLAERG 294

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D  AS+SR+         ++   +L  L+  +++   +  +G Y PG D + D A
Sbjct: 295 HYPAIDVQASLSRITSSVTDRQHQRGNVTLRRLLAAYQQVEMLLRLGEYTPGNDTMTDCA 354

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           V     I  FL+Q   +L      Q+   +L
Sbjct: 355 VQLHEQINGFLQQ---ELREPQALQDTLHQL 382


>gi|89069824|ref|ZP_01157159.1| H+-transporting two-sector ATPase, alpha/beta subunit [Oceanicola
           granulosus HTCC2516]
 gi|89044625|gb|EAR50741.1| H+-transporting two-sector ATPase, alpha/beta subunit [Oceanicola
           granulosus HTCC2516]
          Length = 437

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 156/416 (37%), Positives = 225/416 (54%), Gaps = 6/416 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S + S    VT     V +GD V     +    G+VI ++     +   G  E ISL
Sbjct: 23  GRVSGVASAALEVTGFGAGVRVGDPVTLPSLDGRR-GEVIGLDDGTARVLLEGGTEGISL 81

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
              V      R +P   W GRVI+  G+P+DG   L  G       +  P    R+ +  
Sbjct: 82  RTPVRLEPPVRFAPGPHWLGRVIDPDGRPLDGRPLL-PGTGRRPRAAPPPRPHRRRPLGA 140

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203
              TG  V D   PL  GQR+G+FAGSG+GKSTLL   AR    D V+I LVGERGRE+R
Sbjct: 141 RLSTGFAVFDTLLPLVRGQRLGLFAGSGVGKSTLLGDLARGVEADVVVIGLVGERGRELR 200

Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            F+++ LG + + +++VV ATSD +P +R+     A+ +A++F   G +VLL+LDS+TRF
Sbjct: 201 TFVDEVLGAEGMARAIVVTATSDTAPQVRRRCAPAAMAVAQHFRDTGHHVLLLLDSVTRF 260

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + RE+A   GE    RG+P S    +  L ER GP E + G+ITAV SVLV G +  +
Sbjct: 261 AEAHRELAAAQGEPASLRGFPASTAGAIAALCERAGPGE-DAGDITAVFSVLVAGSDMEE 319

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+AD +R +LDGH++L+R +AE  R+P +D L SVSR    A S  E  L+S    L+  
Sbjct: 320 PVADMLRGVLDGHVILDRKVAERNRFPAIDLLRSVSRALPAAASDVENSLISRARALLGS 379

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           ++    +   G Y  G D  +D+A+     +  FL Q  + +S  + F  + + L 
Sbjct: 380 YDRAEMMIQSGLYASGSDARIDEAIACHDALDGFLAQRSASVS--ESFAALRRALN 433


>gi|270262384|ref|ZP_06190655.1| flagellum-specific ATP synthase [Serratia odorifera 4Rx13]
 gi|270043068|gb|EFA16161.1| flagellum-specific ATP synthase [Serratia odorifera 4Rx13]
          Length = 324

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 129/294 (43%), Positives = 185/294 (62%), Gaps = 1/294 (0%)

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +E+    G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+
Sbjct: 20  LQRTPIEQVLDVGVRTINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLI 79

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F  +G +VLL
Sbjct: 80  GERGREVKDFIENILGTEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLL 139

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           I+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL
Sbjct: 140 IMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVL 199

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DPIADS R+ILDGH+VL+R LAE G YP +D  AS+SR        +  + V 
Sbjct: 200 TEGDDQQDPIADSARAILDGHVVLSRRLAEAGHYPAIDIEASISRAMTSLIDEEHYRRVR 259

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +   ++  ++  RD+  +G Y  G D +LDKA+   P++  +L+Q   + S  D
Sbjct: 260 NFKQMLASYQRNRDLISVGAYVAGSDPLLDKAMTLYPLMEAYLQQGIFERSGYD 313


>gi|224826630|ref|ZP_03699731.1| flagellar protein export ATPase FliI [Lutiella nitroferrum 2002]
 gi|224601231|gb|EEG07413.1| flagellar protein export ATPase FliI [Lutiella nitroferrum 2002]
          Length = 464

 Score =  242 bits (617), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 200/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+++LG+P+D    L + +    + S+    + R  V      G+R I+    +  GQ
Sbjct: 128 GRVLDSLGRPLDEKGPL-QPEAYFPLYSQPLNPLERSPVRDVLDVGVRAINGLLTVGRGQ 186

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           R+G+FAGSG+GKS LL M AR    D V++ L+GERGREV++FIE+ LG+  + +SV+V 
Sbjct: 187 RLGLFAGSGVGKSVLLGMMARFTKADIVVVGLIGERGREVKDFIENILGEEGRARSVIVA 246

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D  P++R      A  +AEY+  +G +VLL++DS+TR+A + REIA   GE PV +G
Sbjct: 247 APADTPPLMRLHGAAYATALAEYYREQGLDVLLLMDSVTRYAMAQREIALAIGEPPVTKG 306

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF+ LP+L+ER G + +  G ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R 
Sbjct: 307 YPPSVFARLPQLIERAGNAARGGGAITAFYTVLSEGDDQQDPIADAARAILDGHFVLSRE 366

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE G YP +D   S+SR+     +  +  L      L  R++  RD+  +G Y  G D 
Sbjct: 367 LAEAGHYPAIDIEQSISRVMVDVVAPRQMDLARRFKQLYSRYQRNRDLISVGAYVAGSDP 426

Query: 402 ILDKAV-HQVPIIYDFLKQ 419
           +LD+A+  Q+P++  FL Q
Sbjct: 427 MLDEAIRRQLPMV-GFLTQ 444


>gi|149201590|ref|ZP_01878564.1| FliI, Flagellum-specific ATPase [Roseovarius sp. TM1035]
 gi|149144638|gb|EDM32667.1| FliI, Flagellum-specific ATPase [Roseovarius sp. TM1035]
          Length = 444

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 188/321 (58%), Gaps = 7/321 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++A G P+DG    G  D   +  +  +    + RQ V+     G+RVI+    +  
Sbjct: 104 GRVLDAEGAPLDG---YGPPDCPETRPLSGREQNPLARQPVDAPLDVGVRVINAALTVGR 160

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219
           GQR+G+ AGSG+GKS L+ M  R    D +++ L+GER REV +F+   + G+N  K+ V
Sbjct: 161 GQRVGIIAGSGVGKSVLIEMMTRYTSADVIVVGLIGERAREVGDFVSKVMTGENRAKTCV 220

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V   +D SP+LR  A   A  IAEYF  +G  V+LI+DS+TR AH+ REI    GE P A
Sbjct: 221 VAVPADRSPLLRLRAAHRATAIAEYFRDQGKQVMLIMDSLTRVAHARREIGLALGEQPTA 280

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338
           +GY  SV S +P L+ER GP    +G+ITA  ++L DGD+  NDP+ D+ R+ILDGH VL
Sbjct: 281 KGYTPSVISMIPGLIERAGPGLPGQGSITAFYTILADGDDTTNDPVVDTARAILDGHFVL 340

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+ A+ G YP +D   SVSR+               L  LI  + E RD+ L+G Y PG
Sbjct: 341 SRNQAQMGIYPAIDLTQSVSRVMKDIAEKPHHAAAMRLRRLIALYMENRDMMLMGAYSPG 400

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            D  LD+AV   P I  F++Q
Sbjct: 401 QDATLDEAVTLWPRIEAFIRQ 421


>gi|85058028|ref|YP_453730.1| flagellum-specific ATP synthase [Sodalis glossinidius str.
           'morsitans']
 gi|84778548|dbj|BAE73325.1| flagellum-specific ATP synthase FliI [Sodalis glossinidius str.
           'morsitans']
          Length = 458

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 197/337 (58%), Gaps = 9/337 (2%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           RV+   G+P+D   +L   +         PP   + R  +      G+R I+    +  G
Sbjct: 118 RVLCGSGQPLD---NLPPPETGYRASLYSPPLNPLARSPITDVLDVGVRAINGLLTVGRG 174

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG+  + ++V++
Sbjct: 175 QRMGLFAGSGVGKSMLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGIARAVII 234

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REI    GE P  +
Sbjct: 235 AAPADVSPMLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIGLAIGEPPATK 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R
Sbjct: 295 GYPPSVFAKLPTLVERAGNGADGGGSITAFYTVLTEGDDQQDPIADAARAILDGHVVLSR 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   S+SR           + V  +   +  ++  RD+  +G Y  G D
Sbjct: 355 QLAESGHYPAIDIETSISRAMTALVDTAHFQQVQQVKQWLASYQRNRDLLSVGAYAAGSD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +LD+A+   P +  +L+Q   D+S    + +  ++L
Sbjct: 415 PLLDQAIAHYPQLESYLRQ---DVSQPCSYTQSCQQL 448


>gi|85710182|ref|ZP_01041247.1| FliI, Flagellum-specific ATPase [Erythrobacter sp. NAP1]
 gi|85688892|gb|EAQ28896.1| FliI, Flagellum-specific ATPase [Erythrobacter sp. NAP1]
          Length = 450

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 190/318 (59%), Gaps = 2/318 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR ++ LG+PIDG  ++   + +  ++ K   A+ R  V + F  G+R ++    +  GQ
Sbjct: 104 GRAVDGLGQPIDGGPAIHASE-TWPLLGKRESALARSGVSESFDCGVRAVNALATMGVGQ 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+ AGSG+GKS L+   A +   D  +I+L+GER REV +F+  ++ G    + VVV 
Sbjct: 163 RMGIIAGSGVGKSVLIDTVAANAKADLAVIALIGERAREVSDFVTRHMSGAERGRMVVVA 222

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +D +P LR  A   A  IAE+F +KG  VLL+LDS+TR AH+ RE+A   GE   ARG
Sbjct: 223 VPADHAPNLRLRAAQYASAIAEHFRAKGRKVLLVLDSLTRVAHAARELALVLGEPGAARG 282

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP S  S + RL+ER G      G +T + SVL DGD+ +DP+ D+ R+ILDGH+VL+R 
Sbjct: 283 YPPSALSTITRLVERAGNCATSGGAVTGIYSVLADGDDTSDPVVDTARAILDGHLVLSRE 342

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LA+ G YP +D  AS+SR+     SA++ +    L  LI   E  RD+ ++G YR G D 
Sbjct: 343 LAQRGHYPAIDIPASLSRVMHDIASAEQLEAARRLRALIAAREHNRDLVMMGAYRAGSDP 402

Query: 402 ILDKAVHQVPIIYDFLKQ 419
            LD A+     I  FL+Q
Sbjct: 403 DLDCALAHSNAIDAFLQQ 420


>gi|167567833|ref|ZP_02360749.1| type III secretion system ATPase [Burkholderia oklahomensis EO147]
          Length = 445

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/379 (38%), Positives = 217/379 (57%), Gaps = 7/379 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ ++ D   + P      I+ G  V   GR  RI+      GRV++ +G+P+D   ++
Sbjct: 64  EVVAVDGDAALLSPFAEPRGIAAGSAVRALGRPHRIAVGDFLLGRVVDGVGRPLDDGPAI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 +++    P  + R  ++     G+R ID       GQRIG+FA +G GKSTLL 
Sbjct: 124 PDDATRIDLDRAAPDPLARAVIDTPLPLGVRAIDGVLTCGRGQRIGIFAAAGGGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
           M       D  +++L+GERGREVREF+E  L    + ++VVVV+TSD   + R  A  TA
Sbjct: 184 MICDGSLADVTVLALIGERGREVREFLERTLTPQARARAVVVVSTSDRPALERLKAAYTA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE+F  +G +VLL++DS+TRFA + REI   +GE P A  YP S F+ LPRLLER G
Sbjct: 244 TAIAEHFRDQGGDVLLMMDSLTRFARAAREIGLAAGEKPAAGSYPPSFFARLPRLLERAG 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P+    G+IT + +VLV+GD+ N+P+AD VRSILDGHIVL+R LA+   YP +D  ASVS
Sbjct: 304 PA--ATGSITGLYTVLVEGDDMNEPVADEVRSILDGHIVLSRKLAQANHYPAIDVGASVS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   A    L + L  L   + +   +  +G Y+PG D   D A+ +   I  FL 
Sbjct: 362 RVMAQIVDARHLALAARLRRLDAVYRDIELLVRVGEYQPGRDPEADDALARRDAIRRFLC 421

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q    ++ ++ F++   +L
Sbjct: 422 QP---VTEKNTFEQTIDQL 437


>gi|262276392|ref|ZP_06054201.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
 gi|262220200|gb|EEY71516.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
          Length = 438

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 206/328 (62%), Gaps = 2/328 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ +G P+DG   +  G  +    + + P + R+ ++     GI+ I+    +  GQ
Sbjct: 102 GRVIDGVGNPLDGLGDIFTGQTAPFTPAVINP-LARKPIDAPLDVGIKAINGLLTVGKGQ 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+FAGSG+GKS  L M  R      V++ L+GERGREV+EFI++ LG +  +++VVV 
Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIDEILGKEGRERAVVVA 220

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP++R     TA+TIAE+F  +G +VLL++DS+TRFA + REIA + GE P  +G
Sbjct: 221 APADASPLMRLKGCQTALTIAEFFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP SVF++LP L+ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R 
Sbjct: 281 YPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSRE 340

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +A+ G YP +D   SVSR+     + +   +  ++  ++    + +D+  IG Y+PG D 
Sbjct: 341 MADAGHYPAIDVERSVSRVMPNIVNDEHMLMARAVRQVLSVCRKNQDLVSIGAYKPGTDQ 400

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            +D+A    P +  +L+Q   ++   D+
Sbjct: 401 AIDQAFTLKPRLDMYLQQGMKEVVPYDM 428


>gi|325295415|ref|YP_004281929.1| ATPase, FliI/YscN family [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065863|gb|ADY73870.1| ATPase, FliI/YscN family [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 441

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/361 (39%), Positives = 217/361 (60%), Gaps = 9/361 (2%)

Query: 81  ISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ISLG ++       +I  S    G V++  G P++ +  +    + ++     P  M R+
Sbjct: 67  ISLGSIIESKISGLKIGVSDSLLGLVLDPFGNPMNAESFVPIDFVPLKAEPINP--MKRK 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+++    G+R I+    +  GQRIG+FAG+G+GKSTL+ M +R    D  +++L+GERG
Sbjct: 125 RIKEPLDLGVRAINALLTVGKGQRIGIFAGAGVGKSTLMGMISRFTEADVNVVALIGERG 184

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFIED LG+  LKKSV+VVATSD  P+ +  A  TA  IAEYFS KG NVLL +DS
Sbjct: 185 REVREFIEDNLGEEGLKKSVIVVATSDHPPLAKIRAAFTACAIAEYFSYKGKNVLLFVDS 244

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR A + REI    GE P ++GY  SVFS + +L+ER G +  + G+IT + +VLV+GD
Sbjct: 245 LTRLAMAQREIGLAVGEPPTSKGYTPSVFSTMAKLIERAG-NFTDGGSITGIYTVLVEGD 303

Query: 319 NHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           + + DP+AD+    LDGHI+L+R LA    +P +D + S+SRL  +  + +  K  S + 
Sbjct: 304 DISLDPVADAAVGFLDGHIILSRELANRRVFPSIDIIKSISRLTPQLVNEEVLKYQSIVL 363

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +   ++   D+  +G Y+ G    +D A+   P I +F+KQS    + +  F +  K+L
Sbjct: 364 DVESTYQNNSDVINLGLYKKGTSPKIDLAIKVYPAIENFIKQS---FNEKVTFSQSLKEL 420

Query: 438 Q 438
           +
Sbjct: 421 K 421


>gi|188997541|ref|YP_001931792.1| flagellar protein export ATPase FliI [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932608|gb|ACD67238.1| flagellar protein export ATPase FliI [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 437

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 203/321 (63%), Gaps = 5/321 (1%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             G +++  G+P++ +         +++ +  P  + R+RV +    G+R ++    +  
Sbjct: 90  LLGTIVDPFGRPLNKEKINYSNSYYLKLETINP--LERERVTEVLDLGVRAVNALFTIGK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQR+G+ +G+G+GKSTLL M +R    D  +I+L+GERGREVREFIED L +  LKKSVV
Sbjct: 148 GQRMGILSGAGVGKSTLLGMISRFTESDVNVIALIGERGREVREFIEDSLKEEGLKKSVV 207

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD  P+ +  A +T++ IA YFS+ G NVL +LDS+TR A + REI  ++GE P  
Sbjct: 208 VVATSDMPPLAKIRAVMTSLAIARYFSNIGKNVLYLLDSLTRVAMAQREIGLSAGEPPTT 267

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338
           +GY  SVF+ LPR++E+ G + K KG+IT + +VLV+GD   NDPIAD+  S LDGHIVL
Sbjct: 268 KGYTPSVFTLLPRIIEQAG-NFKNKGSITGIYTVLVEGDEIQNDPIADAAISFLDGHIVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R +A +  YP +D L S+SRL  +  + +     S +  L  ++ E  D+  +G Y+ G
Sbjct: 327 SRQIANKRIYPAIDILKSISRLMPQLVNDEIMLYQSKIISLEAKYREMEDMINLGLYKEG 386

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
               +D A+   P+I +F+KQ
Sbjct: 387 SSKEVDLAIKMHPVIEEFIKQ 407


>gi|187734342|ref|YP_001883212.1| type III secretion system ATPase [Shigella boydii CDC 3083-94]
 gi|187426838|gb|ACD06113.1| type III secretion system ATPase [Shigella boydii CDC 3083-94]
          Length = 430

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161
           G V+N LG+  D        ++    +   PP  + R  +EK F TG++VID       G
Sbjct: 93  GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219
           QR+G+FA +G GK+ L++M       D  +I L+GERGREV E + DYL ++ KKS  V+
Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSSADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A   A  IAE+F ++G  V L +DS+TR+A ++R++A  +GE P  
Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LPRLLER G   K  G+ITA  +VL++ D+  DP+A+ VRSILDGHI L+
Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA++G++P +D L S+SR+  +      + + ++   L+   EE R I   G Y+PG 
Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +   DK  +++ ++  FLKQ
Sbjct: 391 NASQDKIYNKISVVESFLKQ 410


>gi|167915294|ref|ZP_02502385.1| type III secretion system ATPase [Burkholderia pseudomallei 112]
          Length = 316

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 129/302 (42%), Positives = 189/302 (62%), Gaps = 3/302 (0%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL MFAR    
Sbjct: 4   LIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAAC 63

Query: 188 DKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   A  IAEYF 
Sbjct: 64  DVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFR 123

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G      G+
Sbjct: 124 DRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGS 181

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+      
Sbjct: 182 ITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVD 241

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F  Q   D ++
Sbjct: 242 DGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAA 301

Query: 427 ED 428
            +
Sbjct: 302 AE 303


>gi|13449096|ref|NP_085312.1| invasion protein [Shigella flexneri 5a]
 gi|31983538|ref|NP_858282.1| ATP synthase SpaL [Shigella flexneri 2a str. 301]
 gi|60415903|sp|P0A1C1|SPAL_SHIFL RecName: Full=Probable ATP synthase SpaL/MxiB
 gi|60415904|sp|P0A1C2|SPAL_SHISO RecName: Full=Probable ATP synthase SpaL/MxiB
 gi|13310644|gb|AAK18468.1|AF348706_157 invasion protein [Shigella flexneri 5a]
 gi|152792|gb|AAA26541.1| spa47 [Shigella flexneri]
 gi|303889|dbj|BAA02825.1| spa47 [Shigella flexneri]
 gi|829076|dbj|BAA09158.1| ORF18 [Shigella sonnei]
 gi|12329093|emb|CAC05824.1| Spa47, component of the Mxi-Spa secretion machinery, putative
           ATPase [Shigella flexneri]
 gi|18462530|gb|AAL72302.1| Spa47, component of the Mxi-Spa secretion machinery, putative
           ATPase [Shigella flexneri 2a str. 301]
 gi|281603904|gb|ADA76887.1| ATP synthase [Shigella flexneri 2002017]
 gi|333003139|gb|EGK22688.1| putative ATP synthase hrpB6 [Shigella flexneri K-218]
 gi|333011820|gb|EGK31221.1| putative ATP synthase hrpB6 [Shigella flexneri K-227]
 gi|333011857|gb|EGK31250.1| putative ATP synthase hrpB6 [Shigella flexneri K-227]
 gi|333020381|gb|EGK39645.1| putative ATP synthase hrpB6 [Shigella flexneri K-304]
          Length = 430

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161
           G V+N LG+  D        ++    +   PP  + R  +EK F TGI+VID       G
Sbjct: 93  GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCGEG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219
           QR+G+FA +G GK+ L++M       D  +I L+GERGREV E + DYL ++ KKS  V+
Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A   A  IAE+F ++G  V L +DS+TR+A ++R++A  +GE P  
Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LPRLLER G   K  G+ITA  +VL++ D+  DP+A+ VRSILDGHI L+
Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA++G++P +D L S+SR+  +      + + ++   L+   EE R I   G Y+PG 
Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +   DK  +++ ++  FLKQ
Sbjct: 391 NASQDKIYNKISVVESFLKQ 410


>gi|171319011|ref|ZP_02908138.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171095766|gb|EDT40719.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 459

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/332 (43%), Positives = 191/332 (57%), Gaps = 6/332 (1%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGI 149
           G  R+       GRV++ LG+P+D D S    D+ M   +   P  + R  +     TG+
Sbjct: 104 GSHRVGVGGALLGRVLDGLGRPLD-DGSPLPDDVEMRASAAASPRPLTRPLIRSILPTGV 162

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-IISLVGERGREVREFIED 208
           R ID       GQR+G+FA +G GKSTLL M AR    + V +I+L+GERGREVREF++D
Sbjct: 163 RAIDGLLTTGRGQRVGIFAPAGTGKSTLLGMIARGVSHECVCVIALIGERGREVREFLDD 222

Query: 209 YLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
            L  + LK +VVVVATSD   + R  A  TA TIAEYF   G  VLL+ DS+TRFA ++R
Sbjct: 223 ILTPEQLKNTVVVVATSDRPSMERIKAAYTATTIAEYFRDNGREVLLLFDSVTRFARALR 282

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E    +GE  V RGYP SVFS LP L+ER GP+    G ITA  +VL++    +DPI + 
Sbjct: 283 ETGLAAGEPAVRRGYPPSVFSALPGLVERAGPA--ATGTITAFYTVLLEDAEMSDPIGEE 340

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           +RS+LDGHIVL+  LA  G YP +D   SVSRL  +   +      +     + R+E+  
Sbjct: 341 IRSLLDGHIVLSPKLAGAGHYPAIDVRNSVSRLMSQLVDSAASTTATRCREWLARYEDAE 400

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +  +G Y  G D  LD A+     +  FLKQ
Sbjct: 401 LLLQLGEYHEGGDPALDSAIAAHGDLVAFLKQ 432


>gi|27904576|ref|NP_777702.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|38372222|sp|Q89AZ7|FLII_BUCBP RecName: Full=Flagellum-specific ATP synthase
 gi|27903973|gb|AAO26807.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 454

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 198/319 (62%), Gaps = 4/319 (1%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+++ LGKP+D    +  K ++S+  +S  P  ++R+ V     TGIR I+    +  G
Sbjct: 118 GRIVDGLGKPLDNFSKIDSKYNVSLTNVSINP--LHREPVTHVLDTGIRSINGLLTIGRG 175

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           Q+IG+FA SG+GKS LL M  R    D VI+SL+GERGREV+EFI+  L +  L +S+V+
Sbjct: 176 QKIGLFASSGLGKSVLLGMMTRYTQADIVILSLIGERGREVKEFIDSVLTETVLSRSIVI 235

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A S+ S +++    + A+ IAEYF  K  +VLLI+DS+TR+A + REI+ + GELPV++
Sbjct: 236 SAPSESSVLMQTRGAIYAMRIAEYFRDKNFHVLLIMDSLTRYAMAHREISLSIGELPVSK 295

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVFS+L  L+ER G  +   G+ITA  +VL + +   DPI++S RSILDGHI+L+R
Sbjct: 296 GYPPSVFSKLFSLIERAGNGKINSGSITAFFTVLTEEEERYDPISESARSILDGHIILSR 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
             AE G YP ++   S+SR+      +           ++  ++  RD+  +G Y  G D
Sbjct: 356 EYAESGHYPAINIENSISRVMPNIVDSSHYSFACHFKKIVSLYQRNRDLINVGAYISGTD 415

Query: 401 LILDKAVHQVPIIYDFLKQ 419
             LD A+  +P +  FL+Q
Sbjct: 416 PDLDMAITLIPKLNKFLQQ 434


>gi|82524593|ref|YP_406188.1| ATP synthase SpaL [Shigella dysenteriae Sd197]
 gi|81243991|gb|ABB64700.1| Spa47 [Shigella dysenteriae Sd197]
          Length = 430

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161
           G V+N LG+  D        ++    +   PP  + R  +EK F TG++VID       G
Sbjct: 93  GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219
           QR+G+FA +G GK+ L++M       D  +I L+GERGREV E + DYL ++ KKS  V+
Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A   A  IAE+F ++G  V L +DS+TR+A ++R++A  +GE P  
Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LPRLLER G   K  G+ITA  +VL++ D+  DP+A+ VRSILDGHI L+
Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA++G++P +D L S+SR+  +      + + ++   L+   EE R I   G Y+PG 
Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +   DK  +++ ++  FLKQ
Sbjct: 391 NASQDKIYNKISVVESFLKQ 410


>gi|32307042|gb|AAP79012.1| Spa47 [Shigella flexneri]
 gi|320182862|gb|EFW57737.1| Type III secretion cytoplasmic ATP synthase [Shigella flexneri CDC
           796-83]
          Length = 430

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161
           G V+N LG+  D        ++    +   PP  + R  +EK F TG++VID       G
Sbjct: 93  GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219
           QR+G+FA +G GK+ L++M       D  +I L+GERGREV E + DYL ++ KKS  V+
Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A   A  IAE+F ++G  V L +DS+TR+A ++R++A  +GE P  
Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LPRLLER G   K  G+ITA  +VL++ D+  DP+A+ VRSILDGHI L+
Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA++G++P +D L S+SR+  +      + + ++   L+   EE R I   G Y+PG 
Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMATAFRELLSEIEELRTIIDFGEYKPGE 390

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +   DK  +++ ++  FLKQ
Sbjct: 391 NASQDKIYNKISVVESFLKQ 410


>gi|296282263|ref|ZP_06860261.1| FliI/YscN family ATPase [Citromicrobium bathyomarinum JL354]
          Length = 443

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/327 (40%), Positives = 188/327 (57%), Gaps = 16/327 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-------MNRQRVEKGFKTGIRVID 153
           + GR ++A G+PIDG   +        +  +  PA       ++R  V + F TGIR ++
Sbjct: 102 FLGRAVDASGQPIDGGGPV--------LARREWPAGGWRTGALDRASVSQPFDTGIRSLN 153

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GD 212
             T L  GQR+G+ AGSG+GKS L+ M       D +++ L+GER REV +F+  ++ G 
Sbjct: 154 ALTTLGVGQRVGIMAGSGVGKSVLMDMIVGGAEADAIVVGLIGERAREVSDFVSRHMNGP 213

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             +++ +V   +D +  LR    + A +IAE   S+G  VLLILDS+TR AH+ REI   
Sbjct: 214 AGERTAIVAVPADHAANLRLRGAMLATSIAEEMRSQGKKVLLILDSLTRVAHAAREIGML 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE   ARGYP S  S + +L+ER G S +  G IT + +VL DGD+ NDP+ D+ RSIL
Sbjct: 274 LGEPGAARGYPPSALSTITKLIERAGNSAETGGAITGIYTVLADGDDQNDPVVDTARSIL 333

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIVL+R +A+ GRYP VD  AS+SR+ +                L   +EE RD+ L+
Sbjct: 334 DGHIVLSRDIAQRGRYPAVDVGASLSRVMNDIVPPAHVVAARKFRALNATYEENRDLVLM 393

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           G YRPG D  LDKA+     +  FL Q
Sbjct: 394 GAYRPGQDATLDKAIAMHAGMSAFLGQ 420


>gi|194435188|ref|ZP_03067418.1| flagellum-specific ATP synthase [Shigella dysenteriae 1012]
 gi|194416567|gb|EDX32706.1| flagellum-specific ATP synthase [Shigella dysenteriae 1012]
          Length = 430

 Score =  239 bits (610), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161
           G V+N LG+  D        ++    +   PP  + R  +EK F TG++VID       G
Sbjct: 93  GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219
           QR+G+FA +G GK+ L++M       D  +I L+GERGREV E + DYL ++ KKS  V+
Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A   A  IAE+F ++G  V L +DS+TR+A ++R++A  +GE P  
Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LPRLLER G   K  G+ITA  +VL++ D+  DP+A+ VRSILDGHI L+
Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA++G++P +D L S+SR+  +      + + ++   L+   EE R I   G Y+PG 
Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +   DK  +++ ++  FLKQ
Sbjct: 391 NASQDKIYNKISVVESFLKQ 410


>gi|254463340|ref|ZP_05076756.1| flagellum-specific ATP synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206679929|gb|EDZ44416.1| flagellum-specific ATP synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 441

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 131/324 (40%), Positives = 198/324 (61%), Gaps = 3/324 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            + GRV++ALG P+D +     G+ S+ +       + R+ +      G+R ++    + 
Sbjct: 99  AYLGRVVDALGDPLD-EAPAPVGNDSVPLNGTFLNPLARKLIPGALDVGVRAVNGLLTIG 157

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            GQRIG+ AGSG+GKS LL M A+    D +++ L+GER REV E + + + +  +  + 
Sbjct: 158 SGQRIGIIAGSGVGKSVLLGMMAQYTSADVIVMGLIGERAREVGEAVREIMTEEARDRIS 217

Query: 220 VVAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +VA  +D SP+LR  A   A  +AE+F  +G NVLLI+DS+TR AH+ REI    GELP 
Sbjct: 218 IVAVPADRSPLLRIRAARRATALAEHFRDQGKNVLLIMDSLTRVAHAQREIGLALGELPT 277

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
           ++GYP SV S +P L+ER G    E  G+IT + +VL DGD+ NDP+ D+ R+ILDGHIV
Sbjct: 278 SKGYPASVVSMIPTLIERAGMGVGENSGSITGIYTVLADGDDGNDPVVDTARAILDGHIV 337

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+RS+AE G YP +D  AS+SR+ +   + +++        ++  + E RD+ L+GGY  
Sbjct: 338 LSRSIAEMGIYPAIDIPASISRVMNDIVTPEQQASARKFKRMVALYNENRDLMLMGGYVS 397

Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421
           G D  LD+AV   P +  F+ Q+P
Sbjct: 398 GQDADLDEAVALWPKLVSFIGQTP 421


>gi|24215292|ref|NP_712773.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira interrogans serovar Lai str. 56601]
 gi|45657268|ref|YP_001354.1| hypothetical protein LIC11391 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24196389|gb|AAN49791.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira interrogans serovar Lai str. 56601]
 gi|45600506|gb|AAS69991.1| FliI [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 454

 Score =  239 bits (609), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 146/360 (40%), Positives = 210/360 (58%), Gaps = 10/360 (2%)

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM- 129
           + P+G  E I     VF  GR   I       GRV+N +G+PID    +    ++ E   
Sbjct: 79  LMPLGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDKKGHI----ITKEERP 134

Query: 130 --SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
             ++VP  ++R  +     TG+R ID    +  GQR+G+F+GSG+GKS+LL M AR    
Sbjct: 135 PDNEVPNPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIARYTDA 194

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+LVGERGREV EFIE  LG + LKKSVV+ ATSD   + +    L A +IAEYF 
Sbjct: 195 DINVIALVGERGREVNEFIEIDLGKEGLKKSVVLAATSDAPKMEQVNCALLATSIAEYFR 254

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +V L++DS+TRFA + REI+ ++ E P+ RG+ +SVFS+L +L+ER G S K  G 
Sbjct: 255 DQGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTS-KSGGT 313

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT   +VL + D   DPIAD+VR  +DGHI+LNR LAE+  YP +D  AS+SR+  +   
Sbjct: 314 ITGFYTVLTEADEMEDPIADAVRGYIDGHIILNRKLAEKNHYPAIDVPASLSRVMARIAP 373

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            D+      +  LI  +    ++  +  Y  G D  +D A+ +   I  +LKQ   + S+
Sbjct: 374 EDQNLRAGMIRELISVYNSAEELIRLNAYVSGSDPKVDLAIRKKDKIDRYLKQKIQERST 433


>gi|74314948|ref|YP_313366.1| ATP synthase SpaL [Shigella sonnei Ss046]
 gi|73858425|gb|AAZ91131.1| Spa47 [Shigella sonnei Ss046]
          Length = 430

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161
           G V+N LG+  D        ++    +   PP  + R  +EK F TGI+VID       G
Sbjct: 93  GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCGEG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219
           QR+G+FA +G GK+ L++M       D  +I L+GERGREV E + DYL ++ KK+  V+
Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKNRCVL 211

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A   A  IAE+F ++G  V L +DS+TR+A ++R++A  +GE P  
Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LPRLLER G   K  G+ITA  +VL++ D+  DP+A+ VRSILDGHI L+
Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R+LA++G++P +D L S+SR+  +      + + ++   L+   EE R I   G Y+PG 
Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           +   DK  +++ ++  FLKQ
Sbjct: 391 NASQDKIYNKISVVESFLKQ 410


>gi|114799102|ref|YP_758999.1| flagellar protein export ATPase FliI [Hyphomonas neptunium ATCC
           15444]
 gi|114739276|gb|ABI77401.1| flagellar protein export ATPase FliI [Hyphomonas neptunium ATCC
           15444]
          Length = 462

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/398 (35%), Positives = 216/398 (54%), Gaps = 4/398 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ + +    +  +S+   +G+ +V + +     G+++ ++ D V        + I +
Sbjct: 13  GTVTDVAAGMLGIAGVSELAGVGNEIVIEKQGQKIHGEILSVSGDSVTALLYSPSDIIRI 72

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGK---PIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           GD+V      RI P   W G++IN  G+    +     L    +S  + +   PA  R R
Sbjct: 73  GDVVHIEQEARIEPGDHWLGQIINYRGEVATEMPAGAGLTAKGVSRALRAPALPAHLRHR 132

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +     TG  V D   P+C GQR+G+FAGSG+GKST L   A     D+V+I+L+GER R
Sbjct: 133 LGPRLATGWMVTDTLLPICRGQRLGLFAGSGVGKSTFLGSLAGGLEADRVVIALIGERSR 192

Query: 201 EVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+   L + ++ K+VVV AT+ ESP  +K A   A+  AE+F  +G +VL + DSI
Sbjct: 193 EVGEFVNVNLPETVRHKTVVVSATASESPGAKKRAAYCAMATAEHFRDQGHSVLFLFDSI 252

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + RE+A  +GE P    +P S    +  L ER GP    KG+IT + SVLV G +
Sbjct: 253 TRFAEAHREVALLAGETPALNAFPPSTVRVIAELAERAGPGTGAKGDITGIFSVLVAGSD 312

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             +P+AD +R ILDGHI+L+R++AE GRYP +D L SVSR    A +  E  L+     +
Sbjct: 313 LEEPVADMIRGILDGHIILSRNIAERGRYPAIDVLKSVSRALPAAANDWENDLLRDYRRM 372

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           I  ++E   +     +  G D   D+A+   P +  F+
Sbjct: 373 IALYDEVAPMLRASLFEFGRDKDADRAIALYPALDAFV 410


>gi|207108897|ref|ZP_03243059.1| flagellum-specific ATP synthase [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 268

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/264 (47%), Positives = 172/264 (65%), Gaps = 1/264 (0%)

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220
           GQ++G+FAGSG+GKSTL+ M  R       +I+L+GERGRE+ EFIE  L  +L   V+V
Sbjct: 1   GQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLV 60

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
           VATSD+SP++RK     A+++AEYF ++G +VL I+DS+TRFA + REI    GE P ++
Sbjct: 61  VATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSK 120

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+GD+ +DPIAD  RSILDGHIVL+R
Sbjct: 121 GYPPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSR 179

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L + G YPP++ L S SR+A    S  +         L    +E   +  IG Y+ G D
Sbjct: 180 ELTDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGND 239

Query: 401 LILDKAVHQVPIIYDFLKQSPSDL 424
             LD+A+ +  ++  FL Q  + L
Sbjct: 240 KELDEAIKKKALMEQFLAQDENAL 263


>gi|121997297|ref|YP_001002084.1| flagellar protein export ATPase FliI [Halorhodospira halophila SL1]
 gi|121588702|gb|ABM61282.1| flagellar protein export ATPase FliI [Halorhodospira halophila SL1]
          Length = 449

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/297 (43%), Positives = 183/297 (61%), Gaps = 1/297 (0%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +M++    + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M  R    
Sbjct: 133 LMAEPINPLERAPIAAPLDVGVRSINALFTVGRGQRMGLFAGSGVGKSVLLGMMTRYTTA 192

Query: 188 DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D V++ L+GERGREVREFI + LG + L ++VVV A +D SP+ R    + A +IAEYF 
Sbjct: 193 DVVVVGLIGERGREVREFITEILGRHGLARAVVVAAPADTSPLFRLHGAMRATSIAEYFR 252

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G NVLL++DS+TR+A + REI    GE P  +GYP SVF  LPRL+ER G      G+
Sbjct: 253 DQGYNVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFGLLPRLVERAGNGPDGGGS 312

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VLV+GD+  +PIADS R+ILDGH+VL+RSLA+ G YP VD  AS+SR       
Sbjct: 313 ITAFYTVLVEGDDQQEPIADSARAILDGHLVLSRSLADSGVYPAVDVEASISRAMMAITE 372

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              +K       L   + +  D+  +G Y+ G D ++D+A+   P +  FL+Q  S+
Sbjct: 373 GRHQKAAQRFRELYAAYRQNEDLISVGAYQRGSDPLVDQAIQYQPRLRAFLQQDVSE 429


>gi|312171089|emb|CBX79348.1| ATP synthase in type III secretion system [Erwinia amylovora ATCC
           BAA-2158]
          Length = 454

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           + L Q A+ + + L     V + G ++ I+ +   + C+     +GD   + +      L
Sbjct: 8   QRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116
            +++  + + + +  +G  + IS G  +V  +    I  S    G V++  G+ ++  G 
Sbjct: 66  SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 125

Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FAG+G G
Sbjct: 126 SAFAEPGTRVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ ++V++ ATSD S + R 
Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRSSMERA 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV++ LPR
Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D
Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SR                L  L+  +++   +  +G Y+PG D + D AV+   I
Sbjct: 364 VLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+QS   + + D F++   +L
Sbjct: 424 INQFLRQS---MRAPDPFEQTQYQL 445


>gi|331677823|ref|ZP_08378498.1| flagellar protein export ATPase FliI [Escherichia coli H591]
 gi|331074283|gb|EGI45603.1| flagellar protein export ATPase FliI [Escherichia coli H591]
          Length = 407

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/291 (45%), Positives = 178/291 (61%), Gaps = 2/291 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDL 404


>gi|292487020|ref|YP_003529890.1| ATP synthase in type III secretion system [Erwinia amylovora
           CFBP1430]
 gi|291552437|emb|CBA19482.1| ATP synthase in type III secretion system [Erwinia amylovora
           CFBP1430]
          Length = 452

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           + L Q A+ + + L     V + G ++ I+ +   + C+     +GD   + +      L
Sbjct: 6   QRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116
            +++  + + + +  +G  + IS G  +V  +    I  S    G V++  G+ ++  G 
Sbjct: 64  SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 123

Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FAG+G G
Sbjct: 124 SAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 183

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ ++V++ ATSD S + R 
Sbjct: 184 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRSSMERA 243

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV++ LPR
Sbjct: 244 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 303

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D
Sbjct: 304 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SR                L  L+  +++   +  +G Y+PG D + D AV+   I
Sbjct: 362 VLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 421

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+QS   + + D F++   +L
Sbjct: 422 INRFLRQS---MRAPDPFEQTQYQL 443


>gi|292900595|ref|YP_003539964.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
 gi|1181169|gb|AAB06001.1| HrcN [Erwinia amylovora]
 gi|291200443|emb|CBJ47572.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
          Length = 454

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           + L Q A+ + + L     V + G ++ I+ +   + C+     +GD   + +      L
Sbjct: 8   QRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116
            +++  + + + +  +G  + IS G  +V  +    I  S    G V++  G+ ++  G 
Sbjct: 66  SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 125

Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FAG+G G
Sbjct: 126 SAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ ++V++ ATSD S + R 
Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRSSMERA 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV++ LPR
Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D
Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SR                L  L+  +++   +  +G Y+PG D + D AV+   I
Sbjct: 364 VLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+QS   + + D F++   +L
Sbjct: 424 INRFLRQS---MRAPDPFEQTQYQL 445


>gi|116327838|ref|YP_797558.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116330720|ref|YP_800438.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
 gi|116120582|gb|ABJ78625.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116124409|gb|ABJ75680.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
          Length = 454

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/365 (40%), Positives = 211/365 (57%), Gaps = 20/365 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+G  E I     VF  GR   I       GRV+N +G+PID      KG     I++
Sbjct: 79  LMPLGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDK-----KG----HIIT 129

Query: 131 K--------VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           K        VP  ++R  +     TG+R ID    +  GQR+G+F+GSG+GKS+LL M A
Sbjct: 130 KEERGPDNDVPNPLDRPIIRDILMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIA 189

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D  +I+LVGERGREV EFIE  LG + L+KSVV+ ATSD   + +    L A +I
Sbjct: 190 RYTNADINVIALVGERGREVNEFIEIDLGKEGLQKSVVLAATSDAPKMEQVNCALLATSI 249

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +V L++DS+TRFA + REI+ ++ E P+ RG+ +SVFS+L +L+ER G S 
Sbjct: 250 AEYFRDQGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTS- 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G IT   +VL + D   DPIAD+VR  +DGHIVLNR LAE+  YP +D  AS+SR+ 
Sbjct: 309 KSGGTITGFYTVLTEADEMEDPIADAVRGYIDGHIVLNRKLAEKNHYPAIDVPASLSRVM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +    ++      +  LI  ++   ++  +  Y  G D  +D A+ +   I  +LKQ  
Sbjct: 369 ARIAPENQNLRAGMIRELISVYDSAEELIRLNAYVSGSDSRVDLAIRKKDKIDRYLKQKI 428

Query: 422 SDLSS 426
            + S+
Sbjct: 429 QERST 433


>gi|183220359|ref|YP_001838355.1| flagellum-specific ATP synthase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910474|ref|YP_001962029.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167775150|gb|ABZ93451.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778781|gb|ABZ97079.1| Flagellum-specific ATP synthase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 454

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 227/396 (57%), Gaps = 17/396 (4%)

Query: 50  VHQGKNSDNLGQVIRINLDIVY-ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           V +G +   L  V+    D +Y + P+G  +EI     VF  GR   ++      GRV+N
Sbjct: 56  VERGSDKGYLACVLVGFKDHLYTLMPLGDTQEIFPHAFVFSSGRQITLNAGPELLGRVLN 115

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRI 164
            LGKPID    L    ++ E  +  P  +N   R  +    +TG+R ID    +  GQRI
Sbjct: 116 GLGKPIDNKGIL----ITKEERASEPRFLNPLDRPPITDILETGVRAIDGMLTVGRGQRI 171

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVAT 223
           G+F+GSG+GKS+LL M AR    D  +++L+GERGREV EF+   LG + L +SVV VAT
Sbjct: 172 GIFSGSGVGKSSLLGMIARYTNADVNVVALIGERGREVNEFLHVELGKEALARSVVFVAT 231

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           SD S + +      A + AEYF  KG +V L +DS+TR+A ++RE++   GE  V +GY 
Sbjct: 232 SDSSKMEQVSCANLACSAAEYFREKGMSVNLYMDSLTRYAEALRELSI--GEPVVTKGYA 289

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSILDGHIVLNRSL 342
           +SVFS++ +L+ER G S    G+IT   +VL D  D+ +D +AD VR  +DGHIVL R L
Sbjct: 290 SSVFSKMAKLVERAGTSHN-GGSITGFYTVLTDAEDDMDDIVADKVRGFIDGHIVLTRKL 348

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE+  YP +D  AS+SRL  K  + D     S +  LI +++ + DI L+  Y  G D  
Sbjct: 349 AEQSHYPAIDVPASLSRLMQKIVNEDHYMRASIVRELISKYKNSEDIILLNAYVRGADEK 408

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +D A+ +   I D+L+Q   + SS   + E  K+L+
Sbjct: 409 IDMAIDKKSQIDDYLRQRIEEKSS---YNEAIKRLE 441


>gi|146277683|ref|YP_001167842.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17025]
 gi|145555924|gb|ABP70537.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17025]
          Length = 442

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/327 (41%), Positives = 189/327 (57%), Gaps = 7/327 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRVI+A G P+DG   L   D S E  +  +    + R  V +    G+R I+    +  
Sbjct: 104 GRVIDAEGAPLDG---LSPPDCSAEWPLAGRTMNPLARTPVSRPLDVGVRAINAALTVGQ 160

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219
           GQRIG+ AGSG+GKS L+ M  R    D +++ L+GER REV  F    + G+  +K  +
Sbjct: 161 GQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIGERAREVGAFAASVMQGEAARKLCM 220

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V   +D SP+LR  A   A  IAE+F ++G  VLLI+DS+TR AH+ RE+    GE P A
Sbjct: 221 VAVPADRSPLLRLRAARRATAIAEHFRAQGKQVLLIMDSLTRVAHAQREVGLALGEQPTA 280

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338
           +GYP SV S +P L+ER GP    +G ITA+ +VL DGD+  NDP+ D+ R+ILDGH VL
Sbjct: 281 KGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLADGDDTTNDPVVDTARAILDGHFVL 340

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R   + G YP +D   SVSR  +       +K  + L  LI  + + RD+ L+GGY PG
Sbjct: 341 SRRQTQMGLYPAIDIPHSVSRTMNDVVDERHRKAAARLRQLISLYTDNRDLMLMGGYAPG 400

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425
            D  LD+AV   P I   + Q P + S
Sbjct: 401 QDADLDQAVQLWPKIRALIGQGPHEPS 427


>gi|149926089|ref|ZP_01914352.1| type III secretion protein [Limnobacter sp. MED105]
 gi|149825377|gb|EDM84588.1| type III secretion protein [Limnobacter sp. MED105]
          Length = 461

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 155/421 (36%), Positives = 231/421 (54%), Gaps = 13/421 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           N V + GY+S I  +  TV  +   V  G+   +        LG+V+  + +IV I  + 
Sbjct: 24  NPVKRVGYVSEI--IVSTVRAILPDVVQGELCEIETSGGHKILGEVVAFSENIVTISCLE 81

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME-----IMS 130
               ++LG  V   GR   I  S      +++ +G+ +D  +    G LS++     ++ 
Sbjct: 82  SVAGVALGSRVLPLGRAHSIKASDHLLSSLLDGMGRNLDHPNDRRSGVLSVDSDARPVIQ 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             PPA  R  V +   T +RVID    L  GQR+G+FA  G GKSTL++   R    D V
Sbjct: 142 VAPPASKRPPVSESLVTKVRVIDGLLTLGIGQRVGIFAPPGCGKSTLMAQIVRGANVDAV 201

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +  LVGERGRE+REFIE  + D + KKS  V ATSD S I R  A  TA +IAEY   +G
Sbjct: 202 VFGLVGERGRELREFIEKEITDEIRKKSFFVCATSDRSAIERVRAAFTATSIAEYLRDQG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DS+TR A + RE+   +GE     G+  SV+S LP L+ER G    E+G+ITA
Sbjct: 262 KSVLLVVDSLTRLARAQRELGLMAGEPATQAGFTPSVYSILPELIERSG--RTEQGDITA 319

Query: 310 VISVLVDGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           V +VL++G+   +DPIA   +S+LDGHIVL+  L E   +P +DPL S+SR+     S  
Sbjct: 320 VFTVLMEGERIEDDPIASEAKSLLDGHIVLSTKLVERSHFPAIDPLKSLSRVMGSVTSVK 379

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            ++L S +      ++E   +  +  Y+PG D ++D+ V+    + ++ KQS S+  S  
Sbjct: 380 TQELASLVRRAYSLYQEVELLIRLNEYQPGTDPLVDEVVNIKASLDEWCKQSRSEPESPT 439

Query: 429 V 429
           V
Sbjct: 440 V 440


>gi|227820522|ref|YP_002824493.1| type III secretion component, RhcN, ATP synthase [Sinorhizobium
           fredii NGR234]
 gi|227339521|gb|ACP23740.1| type III secretion component, RhcN, ATP synthase [Sinorhizobium
           fredii NGR234]
          Length = 448

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/370 (39%), Positives = 210/370 (56%), Gaps = 7/370 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +   + P+G  + +S    V   GR  +I       GRV+N LG+ +D  D  
Sbjct: 67  EVVGFEEEEAVLTPIGDLDGMSTRAEVIATGRTLQIPVCDDLLGRVVNPLGEILDVSDER 126

Query: 120 G---KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
                 D         P A+ R  + +  + GIR ID    +  GQR+G+F   G+GKS+
Sbjct: 127 AIPVVTDTYYPTHRPPPHALRRDLITEPLQLGIRAIDGLLTVARGQRVGIFGEPGVGKSS 186

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           LLS   R    D ++I L+GERGREVREFIE  LG+   ++SVVVVATSD   I R  A 
Sbjct: 187 LLSAIVRGTKADVIVIGLIGERGREVREFIEGQLGEEGRRRSVVVVATSDRPAIERVKAA 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A  IAEYF  +  +VLL++DS+TRFA + REI   +GE P  RGYP S+F+ LPRLLE
Sbjct: 247 YAATAIAEYFRDQRRDVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSLFAALPRLLE 306

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R GP   + G+ITA+ +VL +GD   DP+A+  ++ILDGHI+L+ +LAE   +P +D L 
Sbjct: 307 RAGPG--QGGSITALYTVLTEGDGTLDPVAEETKAILDGHIMLSSALAERNFFPAIDILK 364

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S SRL +       +   + +  L+ R+EE   +  +G Y  G D + D+A+ +   I  
Sbjct: 365 SRSRLMETVAGRTHRDHAARIRTLLARYEEIELLLRVGEYERGADALSDEAIDKRDAIEA 424

Query: 416 FLKQSPSDLS 425
           FL+QS  + S
Sbjct: 425 FLQQSGDEFS 434


>gi|50121011|ref|YP_050178.1| type III secretion system protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611537|emb|CAG74985.1| type III secretion protein [Pectobacterium atrosepticum SCRI1043]
          Length = 456

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/397 (37%), Positives = 231/397 (58%), Gaps = 11/397 (2%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD   V +  +S  + +++  + D  ++  +G  + I+ G  V   +   RI  S    
Sbjct: 52  IGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGALDGIAQGATVTPLYQPHRIQVSERLL 111

Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           G V++  G+ + DG +S  +  G ++     ++   PP  +R R+ +   TG+R +D   
Sbjct: 112 GSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 171

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
            +  GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ 
Sbjct: 172 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDTIVFGLIGERGRELREFLDHELDDELRS 231

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+V +TSD S + R  A  TA  IAE + ++G  VLLILDS+TRFA + REI    GE
Sbjct: 232 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLILDSLTRFARAQREIGLALGE 291

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
                G P SV++ LPRL+ER G  + E G ITA+ SVL++ D+ NDP+AD VRS++DGH
Sbjct: 292 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 349

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R LAE+G YP +D LAS+SR        D  +    +  L+  +++   +  +G Y
Sbjct: 350 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 409

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +PG D + D AV+    I  FL+QS  +     V Q+
Sbjct: 410 QPGHDELTDSAVNAHSEITQFLRQSMREPMPYGVIQQ 446


>gi|42560420|gb|AAS20380.1| HrcN [Pectobacterium atrosepticum]
          Length = 455

 Score =  236 bits (603), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/397 (37%), Positives = 231/397 (58%), Gaps = 11/397 (2%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD   V +  +S  + +++  + D  ++  +G  + I+ G  V   +   RI  S    
Sbjct: 51  IGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGALDGIAQGATVTPLYQPHRIQVSERLL 110

Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           G V++  G+ + DG +S  +  G ++     ++   PP  +R R+ +   TG+R +D   
Sbjct: 111 GSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 170

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
            +  GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ 
Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDTIVFGLIGERGRELREFLDHELDDELRS 230

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+V +TSD S + R  A  TA  IAE + ++G  VLLILDS+TRFA + REI    GE
Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLILDSLTRFARAQREIGLALGE 290

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
                G P SV++ LPRL+ER G  + E G ITA+ SVL++ D+ NDP+AD VRS++DGH
Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R LAE+G YP +D LAS+SR        D  +    +  L+  +++   +  +G Y
Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 408

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +PG D + D AV+    I  FL+QS  +     V Q+
Sbjct: 409 QPGHDELTDSAVNAHSEITQFLRQSMREPMPYGVIQQ 445


>gi|323388132|gb|ADX60328.1| type III secretion cytoplasmic ATPase RscN [Pseudomonas
           fluorescens]
          Length = 452

 Score =  236 bits (603), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 204/323 (63%), Gaps = 9/323 (2%)

Query: 103 GRVINALGKPIDGD--DSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G+V++  G+PI GD   +  + D++    ++ + P    R R+ +   TG+R ID    L
Sbjct: 109 GQVLDGFGRPIAGDGPSAFVEADIAEASTVLCEAPLPTERPRISRALSTGVRSIDGLITL 168

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ K+
Sbjct: 169 GEGQRVGLFAGAGCGKTTLLAEIARNVECDVIVFGLIGERGRELREFLDHELDDQLRAKA 228

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V+V ATSD S + R  A  TA  +AE F  KG  VLL++DS+TRFA + REI   +GE P
Sbjct: 229 VLVCATSDRSSMERARAAFTATALAEGFRRKGQRVLLLIDSLTRFARAQREIGLAAGE-P 287

Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           + RG  P SV+S +PRL+ER G +    G ITA+ +VL++ D+ NDP+AD VRS+LDGHI
Sbjct: 288 LGRGGLPPSVYSLMPRLVERAGLTRD--GVITAIYTVLIEQDSMNDPVADEVRSLLDGHI 345

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP VD L S+SR+     + +  +  ++L  L+  +++   +  +G Y+
Sbjct: 346 VLSRKLAERGHYPAVDVLGSLSRILSNVATPEHIRAGTALRRLLSAYQQIELMLKLGEYQ 405

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
           PG D + D AV     +  FL+Q
Sbjct: 406 PGSDALTDLAVDSRQAVDGFLRQ 428


>gi|146305082|ref|YP_001185547.1| FliI/YscN family ATPase [Pseudomonas mendocina ymp]
 gi|145573283|gb|ABP82815.1| ATPase, FliI/YscN family [Pseudomonas mendocina ymp]
          Length = 452

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 155/422 (36%), Positives = 241/422 (57%), Gaps = 19/422 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S+++ +   + C      +G+   V +   S+ L +++    D   +  +G  + I 
Sbjct: 29  GRVSAVSGIL--LECQVPAAKVGELCEVSKADGSNMLAEIVGFTPDCTLLSALGTPDGIQ 86

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS---LGKGDL--SMEIMSKVPPAM 136
           +G  +   G   RI       G V++  G+P+ G       G  D   ++ +++   P  
Sbjct: 87  VGATIRPLGIAHRIGVDDSLLGSVLDGFGRPLLGQAQGAFAGPHDARQTLPVIADALPPT 146

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R+     TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+G
Sbjct: 147 QRPRITTALPTGIRSIDSAMLLGEGQRVGLFAGAGCGKTTLMAELARNMACDVIVFGLIG 206

Query: 197 ERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REF++  L D L+K SV+V ATSD S + R  A  TA  IAE + ++G  VLL+
Sbjct: 207 ERGRELREFLDHELDDTLRKRSVLVCATSDRSSMERARAAFTATAIAEAYRARGLKVLLL 266

Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           +DS+TRFA + REI   +GE P+ RG  P SV++ LP+L+ER G SE   G+ITA+ +VL
Sbjct: 267 IDSLTRFARAQREIGIAAGE-PLGRGGLPPSVYTLLPQLVERAGMSES--GSITALYTVL 323

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           ++ D+ NDP+AD VRS+LDGHIV++R LAE+G YP +D  AS+SR+       + ++  +
Sbjct: 324 IEQDSMNDPVADEVRSLLDGHIVMSRKLAEKGHYPAIDVPASISRVLSNVAPREHQRANN 383

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ-----SPSDLSSEDV 429
            L  L+  + +   +  +G Y+PG D + D AV     I  FL+Q     SP  ++ E +
Sbjct: 384 RLRRLMAAYRQVEMLLRLGEYQPGTDPVTDCAVQLHEPINAFLRQDLREPSPLPVTLEAL 443

Query: 430 FQ 431
            Q
Sbjct: 444 MQ 445


>gi|167030910|gb|ABZ05778.1| HrcN [Pectobacterium carotovorum subsp. carotovorum]
          Length = 455

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 149/397 (37%), Positives = 229/397 (57%), Gaps = 11/397 (2%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD   V +  +S  + +V+  + D  ++  +G  + I+ G  V   +    I  S    
Sbjct: 51  IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGAAVTPLYQPHCIQVSDRLL 110

Query: 103 GRVINALGKPI-DGDDSL-----GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           G V++  G+ + DG +S           +  ++   PP  +R R+ + F TG+R +D   
Sbjct: 111 GSVLDGFGRALEDGGESAFVEPGHATGRTQPVLGDAPPPTSRPRISQPFPTGLRAVDGLL 170

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
            +  GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ 
Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRS 230

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+V +TSD S + R  A  TA  IAE + ++G  VLLI+DS+TRFA + REI    GE
Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLALGE 290

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
                G P SV++ LPRL+ER G  + E G ITA+ SVL++ D+ NDP+AD VRS++DGH
Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R LAE+G YP +D LAS+SR        D  +    +  L+  +++   +  +G Y
Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 408

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +PG D++ D AV+    I  FL+QS  +     V Q+
Sbjct: 409 QPGHDVLTDSAVNAQAEITQFLRQSMREPMPYGVIQQ 445


>gi|66044464|ref|YP_234305.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. syringae B728a]
 gi|63255171|gb|AAY36267.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. syringae B728a]
          Length = 449

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 160/424 (37%), Positives = 238/424 (56%), Gaps = 19/424 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +       S  V  GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRGILLECKIPSAKV--GDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135
           +G  +   G   RI       G V++  G+P+ GD  LG          ++ +++   P 
Sbjct: 84  VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+
Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202

Query: 196 GERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+REF++  L + L++ SV+V ATSD S + R  A  TA  IAE F ++G  VLL
Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262

Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           +LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +V
Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++  
Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRAN 379

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      QE 
Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQET 436

Query: 434 TKKL 437
             +L
Sbjct: 437 LDRL 440


>gi|330950818|gb|EGH51078.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           Cit 7]
          Length = 449

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/424 (37%), Positives = 239/424 (56%), Gaps = 19/424 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRGIL--LECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135
           +G  +   G   RI       G V++  G+P+ GD  LG          ++ +++   P 
Sbjct: 84  VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+
Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202

Query: 196 GERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+REF++  L + L++ SV+V ATSD S + R  A  TA  IAE F ++G  VLL
Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262

Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           +LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +V
Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++  
Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRAN 379

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      QE 
Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQET 436

Query: 434 TKKL 437
             +L
Sbjct: 437 LDRL 440


>gi|225850269|ref|YP_002730503.1| flagellar protein export ATPase FliI [Persephonella marina EX-H1]
 gi|225645680|gb|ACO03866.1| flagellar protein export ATPase FliI [Persephonella marina EX-H1]
          Length = 443

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/364 (38%), Positives = 215/364 (59%), Gaps = 13/364 (3%)

Query: 82  SLGDLVFHWGRFRISPSACWCGR-----VINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
           ++G  V  W   R  P +   G      V++  GKP++ D         ++  +  P  +
Sbjct: 66  TIGIRVGSWVEARQEPVSIEVGEELLGTVLDPFGKPLNKDRINPSHHYYLKNATINP--L 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R+R+++    G+R I+    +  GQRIG+F+G+G+GKSTLL M +R    D  +I+L+G
Sbjct: 124 DRERIKEPLDVGVRSINALLTIGKGQRIGIFSGAGVGKSTLLGMISRFTEADVNVIALIG 183

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFIED LG+  LKKSVV+VATSD++P+ +  A  +A+ +A++FS+ G NVL +
Sbjct: 184 ERGREVREFIEDNLGEEGLKKSVVIVATSDQTPLAKIRAAYSAIAVAKFFSNSGKNVLFL 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           LDS+TR A + REI    GE P  +GY  SVF+ LP+ +E+ G +   +G+IT + +VLV
Sbjct: 244 LDSLTRLAMAQREIGLAVGEPPTTKGYTPSVFALLPKFIEQAG-NFYNRGSITGIYTVLV 302

Query: 316 DGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           +GD+   DP+AD+    LDGHIVL+R LA +  +P +D L SVSRL  +  S D  K   
Sbjct: 303 EGDDITMDPVADAAMGFLDGHIVLSRELANKRVFPAIDVLKSVSRLMPQIVSDDILKYQG 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             T +   + E  D+  +G Y+ G    +D A+     +  F+KQ   D+  +    E  
Sbjct: 363 IFTEIESIYREAEDMINLGLYKKGTTPKVDLAIQMHSRMEGFIKQ---DMHKKVTLNESF 419

Query: 435 KKLQ 438
           K+L+
Sbjct: 420 KQLE 423


>gi|28868608|ref|NP_791227.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213968259|ref|ZP_03396403.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato T1]
 gi|301381812|ref|ZP_07230230.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062003|ref|ZP_07253544.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato K40]
 gi|302135085|ref|ZP_07261075.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|34098490|sp|Q887B5|HRCN_PSESM RecName: Full=Type III secretion ATP synthase HrcN
 gi|28851846|gb|AAO54922.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213926897|gb|EEB60448.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato T1]
 gi|331015098|gb|EGH95154.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 449

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/405 (38%), Positives = 233/405 (57%), Gaps = 14/405 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136
           +G  +   G   RI       G V++  G+P+ GD      G  D   ++ +++   P  
Sbjct: 84  VGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPT 143

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+G
Sbjct: 144 QRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLIG 203

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F ++G  VLL+
Sbjct: 204 ERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLL 263

Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +VL
Sbjct: 264 LDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVL 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           ++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       D ++  +
Sbjct: 321 IEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRDHQRANN 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 381 RLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425


>gi|226326430|ref|ZP_03801948.1| hypothetical protein PROPEN_00278 [Proteus penneri ATCC 35198]
 gi|225205213|gb|EEG87567.1| hypothetical protein PROPEN_00278 [Proteus penneri ATCC 35198]
          Length = 338

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 194/307 (63%), Gaps = 7/307 (2%)

Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PP+ N R  +   F++G+R +D       GQR+G+FA +G GK+ L++MF R    D  +
Sbjct: 32  PPSFNDRLPINTLFQSGVRAVDGLLSCGLGQRMGIFASAGTGKTMLMNMFIRFSQADIFV 91

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I L+GERGREV EF+E+   D+  KK+V++ +TSD+  + R  A L A T+AEYF  +G 
Sbjct: 92  IGLIGERGREVTEFVEELKSDSRCKKTVLICSTSDQPAVDRCNAALVATTVAEYFREQGK 151

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +V+L +DSITR+  ++R++A  +GELPV +GYP SVF +LP +LER  P   + G+ITA 
Sbjct: 152 HVVLFIDSITRYCRALRDVALTAGELPVRKGYPASVFDKLPAILER--PGVTKVGSITAF 209

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL++ D+  D I + VRSILDGHI L+R +A  G YP +D L SVSR+  +  S  ++
Sbjct: 210 YTVLLESDDEPDAIGEEVRSILDGHIYLSRKIAASGHYPAIDILGSVSRVFQQITSEKQQ 269

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +    +  ++ R ++ + ++ +G Y  G + + D+AV++  +I  FL QS      +  F
Sbjct: 270 QAALKVRQILMRLQDIKLLQELGEYHAGDNALNDEAVNKQALIERFLVQS---FKEKAEF 326

Query: 431 QEITKKL 437
           QE  +KL
Sbjct: 327 QETQEKL 333


>gi|237800785|ref|ZP_04589246.1| type III secretion component [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023643|gb|EGI03700.1| type III secretion component [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 345

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 195/341 (57%), Gaps = 5/341 (1%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPL 158
              GRVI+ +G+ +DG        L    +   PPA  +RQR+ K    G+R ID    L
Sbjct: 6   ALLGRVISPMGEFLDGPAPAAAIGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTL 65

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218
             GQR+G+F   G+GKS+LL+   R+   D ++I L+GERGREVRE +E  L    +   
Sbjct: 66  AQGQRMGIFGEPGVGKSSLLASIVRNSNVDVIVIGLIGERGREVRELLEGQLDAAARART 125

Query: 219 VVVATSDESPILRKM-APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V V  + + P   ++ A   A T+AEY   +G +VLL++DS+TRFA + REI    GE P
Sbjct: 126 VAVVATSDRPAAERVRAAYVATTLAEYHRDQGRSVLLLMDSLTRFARAQREIGLAVGEPP 185

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             RGYP S FS LPRLLER GP     G+ITA+ +VL +GD   DP+A+  RSILDGHIV
Sbjct: 186 TRRGYPPSFFSALPRLLERAGPG--PSGSITALYTVLTEGDASMDPVAEETRSILDGHIV 243

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+  +A+   +P +D L S SRL D   + + ++L S +  LI R ++   +  +G Y  
Sbjct: 244 LSADMAQRDHFPAIDVLRSRSRLMDHIATPEHRQLASRMRELIARRQQIELLIQVGEYAA 303

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           G D + D+A+ +   I  FL+Q  ++  S E    ++ K L
Sbjct: 304 GSDPVADEAIARHSAIEAFLRQPAAEHDSLEQTLSQMRKVL 344


>gi|82470762|gb|ABB77414.1| HrcN [Pantoea stewartii subsp. stewartii]
          Length = 454

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/423 (36%), Positives = 242/423 (57%), Gaps = 15/423 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEIS 82
           G ++ I  +   + C      +GD  + Q    D  L +++  + + + +  +G  + IS
Sbjct: 31  GKVTGINGIL--IECSLPGARIGDLCLIQRSEGDAVLSEIVGFSAEHILLSALGALDGIS 88

Query: 83  LGDLVFH-WGRFRISPSACWCGRVINALGKPID--GDDSLGKGDL---SMEIMSKVPPAM 136
            G L+   +    I  S    G V++  G+ ++  G  +  +  L   ++ +++  PP  
Sbjct: 89  QGALITPLYLPHSICVSERLMGSVLDGFGRALEPGGYSAFAEPGLQCTTVPVLNDAPPPT 148

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R++    TG+R ID    +  GQR+GVFAG+G GK+TLL+  AR+   D ++  L+G
Sbjct: 149 ERPRIDTVLPTGLRAIDGLLTIGKGQRVGVFAGAGCGKTTLLAELARNSPCDVIVFGLIG 208

Query: 197 ERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REF++  L D L+K ++++ ATSD S + R  A  TA  IAE F ++G +VLLI
Sbjct: 209 ERGRELREFLDHELDDTLRKRTILLCATSDRSSMERARAAFTATAIAEAFRAEGKSVLLI 268

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P   G P SV++ LPRL+ER G  +  KG ITA+ SVL+
Sbjct: 269 IDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPRLVERAG--QTRKGAITALYSVLI 326

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           + D+  DP+AD VRS++DGHIVL+R LAE   YP +D LAS+SR           K V +
Sbjct: 327 EQDSMGDPVADEVRSLIDGHIVLSRRLAERNHYPAIDILASLSRTMSNVVDQVHLKQVGN 386

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           +  LI  +++   +  +G Y+PG D++ D AV+    I  FL+Q+   + + + F+ I  
Sbjct: 387 IRSLIAAYKQVEVLIRLGEYQPGHDILTDAAVNANDTINHFLRQT---MRTPEPFEHILS 443

Query: 436 KLQ 438
           +L 
Sbjct: 444 QLN 446


>gi|51103049|gb|AAT96195.1| HrcN [Pseudomonas viridiflava]
          Length = 450

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/407 (38%), Positives = 235/407 (57%), Gaps = 18/407 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    D   +  +G  + I 
Sbjct: 27  GRVSAVRGIL--LECKLPAAKVGDLCEVSKADGSLLLAEIVGFTPDCTLLSALGAPDGIQ 84

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135
           +G  +   G   RI       G V++  G+P+ GD +LG          ++ +++   P 
Sbjct: 85  VGATIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGD-ALGAFAGPDDRRTTLPVIADALPP 143

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISL 194
             R R+ +   TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+ DC D ++  L
Sbjct: 144 TQRPRISRALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGL 202

Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F  KG  VL
Sbjct: 203 IGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAIAEAFREKGQKVL 262

Query: 254 LILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +
Sbjct: 263 LLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++ 
Sbjct: 320 VLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRA 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 380 NNRLRQLMAAYKQVEMLLRLGEYQAGSDPVTDCAVKLNEDINAFLRQ 426


>gi|227114172|ref|ZP_03827828.1| type III secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 455

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/397 (37%), Positives = 230/397 (57%), Gaps = 11/397 (2%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD   V +  +S  + +V+  + D  ++  +G  + I+ G  V   +    I  S    
Sbjct: 51  IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGATVTPLYQPHCIQVSERLL 110

Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           G V++  G+ + DG +S  +  G  S     ++   PP  +R R+ +   TG+R +D   
Sbjct: 111 GSVLDGFGRALEDGGESAFVEPGQASGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 170

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
            +  GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ 
Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRS 230

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+V +TSD S + R  A  TA  IAE + ++G  VLLI+DS+TRFA + REI    GE
Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLALGE 290

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
                G P SV++ LPRL+ER G  + E G ITA+ SVL++ D+ NDP+AD VRS++DGH
Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R LAE+G YP +D LAS+SR        D  +    +  L+  +++   +  +G Y
Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 408

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +PG D++ D AV+    I  FL+QS  +     V Q+
Sbjct: 409 QPGHDVLTDSAVNAQAEITQFLRQSMREPMPYGVIQQ 445


>gi|188532670|ref|YP_001906467.1| HrcN protein (hrp cluster) [Erwinia tasmaniensis Et1/99]
 gi|188027712|emb|CAO95565.1| HrcN protein (hrp cluster) [Erwinia tasmaniensis Et1/99]
          Length = 454

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/445 (34%), Positives = 250/445 (56%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           ++L Q A+   + L     V + G ++ I+ +   + C      +GD   + +      L
Sbjct: 8   QSLTQWAQRQQQRLEGYAPVSRYGRVTGISGIL--IECTLPGARIGDLCRIQRSDGGSVL 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPID--GD 116
            +++  + + + +  +G  + IS G ++   +    I  S    G V++  G+ ++  G 
Sbjct: 66  SEIVGFSPEKILLSALGALDGISQGAIIIPLYLPHSICVSERLLGSVLDGFGRALEPGGH 125

Query: 117 DSLGKGDL---SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +  K      ++ +++  PP   R R++    TG+R ID    + +GQR+G+FAG+G G
Sbjct: 126 SAFAKPGTKVRAVPVLNDAPPPTERPRIDTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF++  L + L+ ++V++ ATSD S + R 
Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRSSMERA 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV++ LPR
Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G  +  +G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D
Sbjct: 306 LVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SR           +    L  L+  +++   +  +G Y+PG D + D AV+   I
Sbjct: 364 ILASLSRTMSNVVEPTHMQQAGRLRSLMAAYQQVEMLIRLGEYQPGNDGLTDAAVNANDI 423

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+QS   + + D F++    L
Sbjct: 424 INRFLRQS---MRAPDPFEQTQYHL 445


>gi|94495432|ref|ZP_01302012.1| ATPase FliI/YscN [Sphingomonas sp. SKA58]
 gi|94424820|gb|EAT09841.1| ATPase FliI/YscN [Sphingomonas sp. SKA58]
          Length = 442

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 1/317 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+A+G+P+D    +  G  +  +       ++R RV + F  G+R ++       GQ
Sbjct: 106 GRVIDAMGQPLDRKGPIITGG-TWPLNGVKGNVLDRGRVTEPFDLGVRAVNALLTAGRGQ 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           RI + AGSG+GKS L+         D V+  L+GERGREV +F+E  L + + KS+VV  
Sbjct: 165 RIAIIAGSGVGKSVLMGQMIAGAEADIVVTGLIGERGREVSDFLETKLKNAMHKSIVVAV 224

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D  P+LR  A   A  IAEYF ++G  VLL++DS+TR AH+ REI    GE P  +GY
Sbjct: 225 PADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSLTRCAHAQREIGLALGEPPAMKGY 284

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  + +PRL+ER G   +  G+ITA+ +VL DGD+ +DPI D+ R+I+DGH VL+R L
Sbjct: 285 PPSALALIPRLVERAGVDARTGGSITALYTVLADGDDTDDPIVDAARAIVDGHFVLSRQL 344

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           +E+  +P +D   S+SR+       D ++  +    L   +EE RD+ L+G YRPG D +
Sbjct: 345 SEQAIFPAIDIGKSLSRVMADVVPDDHRQAAAGYRRLWAAYEENRDLILMGAYRPGNDPV 404

Query: 403 LDKAVHQVPIIYDFLKQ 419
           +D+AV +   I DF++Q
Sbjct: 405 IDEAVKRRQEILDFIRQ 421


>gi|310766422|gb|ADP11372.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation
           pathway-hrcN protein [Erwinia sp. Ejp617]
          Length = 454

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/445 (34%), Positives = 250/445 (56%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           + L Q A+   + L     V + G ++ I+ +   + C+     +GD   + +      L
Sbjct: 8   QRLTQWADQQQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116
            +++  + + + +  +G  + IS G  +V  +    I  S    G V++  G+ ++  G 
Sbjct: 66  SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 125

Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FAG+G G
Sbjct: 126 SAFAEPGSQVRAVPVLNDAPPPTERPRIATPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF++  L + L+ ++V++ ATSD S + R 
Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRSSMERA 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV++ LPR
Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D
Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SR                L  L+  +++   +  +G Y+PG D + D AV+   I
Sbjct: 364 VLASLSRTMSNVVEPHHMMHAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+QS   + + D F++   +L
Sbjct: 424 INQFLRQS---MRAPDPFEQTQYQL 445


>gi|226941275|ref|YP_002796349.1| FliI1 [Laribacter hongkongensis HLHK9]
 gi|226716202|gb|ACO75340.1| FliI1 [Laribacter hongkongensis HLHK9]
          Length = 463

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/416 (36%), Positives = 230/416 (55%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           GY++ +T +      +   V  G +V +  G+  +   +V+  N D++Y+ PV   + + 
Sbjct: 29  GYLTRVTGLVMEAVGVRLPVGGGAWVTLPDGRRIE--AEVVGFNGDVLYLMPVSSVQGLL 86

Query: 83  LGDLV-FHW-----------------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
            G  V   W                 G  R+       GR++++LG+P+D    +     
Sbjct: 87  PGAAVEPDWPVSPPVFGHAATLDAAQGGRRVPVGMKLLGRIVDSLGRPLDEAGPVHPDTF 146

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                + + P ++R  V      G+R I+    +  GQR+G+FAGSG+GKS LL M A+ 
Sbjct: 147 YPLHAAPINP-LDRDPVRSSMDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVLLGMMAKY 205

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D V++ L+GERGREV++FIE+ LG+  L ++VVV A +D  P++R      A  +AE
Sbjct: 206 TRADVVVVGLIGERGREVKDFIENILGEEGLARAVVVAAPADTPPLMRLHGAAYATALAE 265

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           Y+  +G +VLL++DS+TR+A + REIA   GE PV RGYP SVF++LP+L+ER G     
Sbjct: 266 YYRDQGLDVLLLMDSVTRYAMAQREIALAIGEPPVTRGYPPSVFAKLPQLIERAGNGRAG 325

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA  +VL +GD+  DP+ADS R+ILDGH VLNR LAE G YP +D   S+SR+   
Sbjct: 326 GGSITAFYTVLSEGDDQQDPVADSSRAILDGHFVLNRRLAEAGHYPAIDIEQSISRVMVD 385

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             SAD             R++   D+  +G Y  G D +LD+A+ +  ++  FL Q
Sbjct: 386 VVSADHVASARRFKQFYSRYQRNLDLISVGAYVSGADPMLDEAIRRHDMMESFLIQ 441


>gi|34098419|sp|Q52371|HRCN_PSESY RecName: Full=Type III secretion ATP synthase HrcN
          Length = 449

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/424 (37%), Positives = 238/424 (56%), Gaps = 19/424 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRRIL--LECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135
           +G  +   G   RI       G V++  G+P+ GD  LG          ++ +++   P 
Sbjct: 84  VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+
Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202

Query: 196 GERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+REF++  L + L++ SV+V ATSD S + R  A  TA  IAE F ++G  VLL
Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262

Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           +LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +V
Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+         ++  
Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRKHQRAN 379

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      QE 
Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQET 436

Query: 434 TKKL 437
             +L
Sbjct: 437 LDRL 440


>gi|320182744|gb|EFW57628.1| Flagellum-specific ATP synthase FliI [Shigella boydii ATCC 9905]
          Length = 412

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/291 (44%), Positives = 177/291 (60%), Gaps = 2/291 (0%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++  GKP+DG  S    +    I     P + R  +E    TG+R I+    + 
Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQR+G+FAGSG+GK  LL M AR    D +++ L+GERGRE+++FIE+ LG +   +SV
Sbjct: 174 RGQRMGLFAGSGVGKGVLLGMMARYTRADVIVVGLIGERGRELKDFIENILGAEGRARSV 233

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P 
Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL
Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +R LAE G YP +D  AS+SR      S      V +   L+  F+  RD+
Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDL 404


>gi|284007403|emb|CBA72815.1| type III secretion cytoplasmic ATP synthase
           YscN,SpaL,MxiB,HrcN,EscN,InvC [Arsenophonus nasoniae]
          Length = 411

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/350 (40%), Positives = 209/350 (59%), Gaps = 12/350 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIR 150
           ++SP+   C  VIN++G  I       +G L+ E   I    P  + R+ ++  F TGI+
Sbjct: 67  KLSPNLLGC--VINSMGH-IAERFKENRGLLTNEKRGINQSPPNYLQRKPIQHPFVTGIK 123

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            ID       GQR+G+FA +G GK++L+ M  +    D  +I+L+GERGRE+ EF+ D L
Sbjct: 124 AIDGLITCGIGQRLGIFASAGCGKTSLIHMMIQHASADIFVIALIGERGRELTEFV-DTL 182

Query: 211 GD--NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
               ++ K V+V ATSD S I R  A L A TIAEYF   G NV+L LDSITR++ ++R+
Sbjct: 183 KQTGHIDKCVIVYATSDYSSIDRVNAALVATTIAEYFRDAGSNVVLFLDSITRYSRALRD 242

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +A  +GE P  RGYP SVF  LP+LLER  P   +KG ITA  ++L++ D+  DPIA+ +
Sbjct: 243 VALAAGEPPARRGYPASVFEALPKLLER--PGLTQKGGITAFYTILLENDDEPDPIAEEI 300

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           RSILDGHI LNR LAE+  YP +  L S+SR+A +         V+ +  ++ + EE + 
Sbjct: 301 RSILDGHIYLNRKLAEKSHYPAISILQSISRVASQICDQKHLSHVAQVKKILSKIEELKI 360

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
              +G Y+ G +   D+ +++   I ++L QSP +  S E + QE+ + L
Sbjct: 361 FIDLGEYKEGENRENDEMLYKYNKINNWLMQSPDEKKSFESIKQEMYEIL 410


>gi|167574489|ref|ZP_02367363.1| type III secretion system ATPase [Burkholderia oklahomensis C6786]
          Length = 358

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/345 (40%), Positives = 203/345 (58%), Gaps = 6/345 (1%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI+      GRV++ +G+P+D   ++      +++    P  + R  ++     G+R ID
Sbjct: 11  RIAVGDFLLGRVVDGVGRPLDDGPAIPDDATRIDLDRAAPDPLARTVIDTPLPLGVRAID 70

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
                  GQRIG+FA +G GKSTLL M       D  +++L+GERGREVREF+E  L   
Sbjct: 71  GVLTCGRGQRIGIFAAAGGGKSTLLGMICDGSLADVTVLALIGERGREVREFLERTLTPQ 130

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            + ++VVVV+TSD   + R  A  TA  IAE+F  +G +VLL++DS+TRFA + REI   
Sbjct: 131 ARARAVVVVSTSDRPALERLKAAYTATAIAEHFRDQGGDVLLMMDSLTRFARAAREIGLA 190

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +GE P A  YP S F+ LPRLLER GP+    G+IT + +VLV+GD+ N+P+AD VRSIL
Sbjct: 191 AGEKPAAGSYPPSFFARLPRLLERAGPA--ATGSITGLYTVLVEGDDMNEPVADEVRSIL 248

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIVL+R LA+   YP +D  ASVSR+  +   A    L + L  L   + +   +  +
Sbjct: 249 DGHIVLSRKLAQANHYPAIDVGASVSRVMAQIVDARHLALAARLRRLDAVYRDIELLVRV 308

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           G Y+PG D   D A+ +   I  FL Q    ++ ++ F++   +L
Sbjct: 309 GEYQPGRDPEADDALARRDAIRRFLCQP---VTEKNTFEQTIDQL 350


>gi|330963050|gb|EGH63310.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 449

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 156/406 (38%), Positives = 236/406 (58%), Gaps = 16/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136
           +G  +   G   RI       G V++  G+P+ GD      G  D   ++ +++   P  
Sbjct: 84  VGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPT 143

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLV 195
            R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+ DC D ++  L+
Sbjct: 144 QRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGLI 202

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F ++G  VLL
Sbjct: 203 GERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262

Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           +LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +V
Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+     + + ++  
Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTNREHQRAN 379

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425


>gi|289623678|ref|ZP_06456632.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647648|ref|ZP_06478991.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330871282|gb|EGH05991.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 449

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72
           DYS   V   G +S++  +   + C      +GD   V +   S  L +++    +   +
Sbjct: 18  DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126
             +G  + I +G  +   G   RI       G V++  G+P+ GD      G  D   ++
Sbjct: 74  SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGSDDRRETL 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+  
Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D ++  L+GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F
Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304
            ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   
Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+    
Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++  + L  L+  +++   +  +G Y+ G D + D AV     I +FL+Q
Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425


>gi|298485954|ref|ZP_07004029.1| type III secretion system cytoplasmic ATPase [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159540|gb|EFI00586.1| type III secretion system cytoplasmic ATPase [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 449

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72
           DYS   V   G +S++  +   + C      +GD   V +   S  L +++    +   +
Sbjct: 18  DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126
             +G  + I +G  +   G   RI       G V++  G+P+ GD      G  D   ++
Sbjct: 74  SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGSDDRRETL 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+  
Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D ++  L+GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F
Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304
            ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   
Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+    
Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++  + L  L+  +++   +  +G Y+ G D + D AV     I +FL+Q
Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425


>gi|307293807|ref|ZP_07573651.1| ATPase, FliI/YscN family [Sphingobium chlorophenolicum L-1]
 gi|306879958|gb|EFN11175.1| ATPase, FliI/YscN family [Sphingobium chlorophenolicum L-1]
          Length = 442

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 1/317 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+A+G+P+D    +  G  S  +       ++R RV + F  G+R ++       GQ
Sbjct: 106 GRVIDAMGQPLDRKGPIIAGG-SWPLNGVKGNVLDRGRVTEPFDLGVRAVNALLTAGRGQ 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           RI + AGSG+GKS L+    +    D V+  L+GERGREV +F+E  L   + KS+VV  
Sbjct: 165 RIAIIAGSGVGKSVLMGQMIQGAEADIVVAGLIGERGREVSDFLETKLKGAMHKSIVVAV 224

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D  P+LR  A   A  IAEYF ++G  VLL++DS+TR AH+ REI    GE P  +GY
Sbjct: 225 PADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSLTRCAHAQREIGLALGEPPAMKGY 284

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  + +PRL+ER G   +  G+ITA+ +VL DGD+ +DPI D+ R+I+DGH VL+R L
Sbjct: 285 PPSALALIPRLVERAGVDTRSGGSITALYTVLADGDDTDDPIVDAARAIVDGHFVLSRHL 344

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           +E+  +P +D   S+SR+       + +   ++   L   +EE RD+ L+G YRPG D +
Sbjct: 345 SEQAIFPAIDVGKSLSRVMADVVPDEHRMAAAAYRRLWAAYEENRDLILMGAYRPGNDPV 404

Query: 403 LDKAVHQVPIIYDFLKQ 419
           +D+AV +   I DF++Q
Sbjct: 405 IDEAVQRRQEILDFIRQ 421


>gi|34098601|sp|Q8RK01|HRCN_PSESH RecName: Full=Type III secretion ATP synthase HrcN
 gi|19262914|emb|CAD22886.1| putative ATPase [Pseudomonas syringae pv. phaseolicola]
          Length = 449

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72
           DYS   V   G +S++  +   + C      +GD   V +   S  L +++    +   +
Sbjct: 18  DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126
             +G  + I +G  +   G   RI       G V++  G+P+ GD      G  D   ++
Sbjct: 74  SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDDRRETL 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+  
Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D ++  L+GERGRE+REF++  L + L++ SV+V ATSD S + R  A  TA  IAE F
Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304
            ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   
Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+    
Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++  + L  L+  +++   +  +G Y+ G D + D AV     I +FL+Q
Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425


>gi|11276511|gb|AAG33879.1| HrcN [Pseudomonas syringae pv. tomato]
          Length = 419

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/385 (40%), Positives = 227/385 (58%), Gaps = 14/385 (3%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWC 102
           +GD   V +   S  L +++    +   +  +G  + I +G  +   G   RI       
Sbjct: 15  VGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDTLL 74

Query: 103 GRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           G V++  G+P+ GD      G  D   ++ +++   P   R R+ +   TGIR ID    
Sbjct: 75  GCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPTQRPRITRSLPTGIRAIDSAIL 134

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
           L  GQR+G+FAG+G GK+TL++  AR+ DC D ++  L+GERGRE+REF++  L + L+ 
Sbjct: 135 LGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGLIGERGRELREFLDHELDETLRA 193

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SV+V ATSD S + R  A  TA  IAE F ++G  VLL+LDS+TRFA + REI   SGE
Sbjct: 194 RSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQREIGIASGE 253

Query: 276 LPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +VL++ D+ NDP+AD VRS+LDG
Sbjct: 254 -PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVLIEQDSMNDPVADEVRSLLDG 310

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+R LAE G YP +D  AS+SR+       D ++  + L  L+  +++   +  +G 
Sbjct: 311 HIVLSRKLAERGHYPAIDVSASISRILSNVTGRDHQRANNRLRQLLAAYKQVEMLLRLGE 370

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
           Y+ G D + D AV     I  FL+Q
Sbjct: 371 YQAGADPVTDCAVQLNDAINAFLRQ 395


>gi|294013066|ref|YP_003546526.1| flagellum-specific ATP synthase FliI [Sphingobium japonicum UT26S]
 gi|292676396|dbj|BAI97914.1| flagellum-specific ATP synthase FliI [Sphingobium japonicum UT26S]
          Length = 442

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 1/317 (0%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+A+G+P+D    +  G  S  +       ++R RV + F  G+R ++       GQ
Sbjct: 106 GRVIDAMGQPLDRKGPIIAGG-SWPLNGVKGNVLDRGRVTEPFDLGVRAVNALLTAGRGQ 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           RI + AGSG+GKS L+    +    D V+  L+GERGREV +F+E  L   + KS+VV  
Sbjct: 165 RIAIIAGSGVGKSVLMGQMIQGAEADIVVAGLIGERGREVSDFLETKLKGAMHKSIVVAV 224

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D  P+LR  A   A  IAEYF ++G  VLL++DS+TR AH+ REI    GE P  +GY
Sbjct: 225 PADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSLTRCAHAQREIGLALGEPPAMKGY 284

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P S  + +PRL+ER G   +  G+ITA+ +VL DGD+ +DPI D+ R+I+DGH VL+R L
Sbjct: 285 PPSALALIPRLVERAGVDARSGGSITALYTVLADGDDTDDPIVDAARAIVDGHFVLSRHL 344

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           +E+  +P +D   S+SR+       + +   ++   L   +EE RD+ L+G YRPG D +
Sbjct: 345 SEQAIFPAIDVGKSLSRVMADVVPDEHRMAAAAYRRLWAAYEENRDLILMGAYRPGNDPV 404

Query: 403 LDKAVHQVPIIYDFLKQ 419
           +D+AV +   I DF++Q
Sbjct: 405 IDEAVQRRQEILDFIRQ 421


>gi|152990375|ref|YP_001356097.1| flagellar-specific ATP synthase FliI [Nitratiruptor sp. SB155-2]
 gi|151422236|dbj|BAF69740.1| flagellar-specific ATP synthase FliI [Nitratiruptor sp. SB155-2]
          Length = 431

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/343 (38%), Positives = 214/343 (62%), Gaps = 6/343 (1%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I   A   G V++  G P++ +    +  +S++  +  P  + R+R++     G+R I+
Sbjct: 77  KIGVGADLLGTVLDPFGNPLNKEKLQFETKVSLKNETINP--LLRERIKTPLDIGVRSIN 134

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212
               +  GQRIG+FA +G+GKSTLL M +R    D  +I+L+GERGREVREFIED LG +
Sbjct: 135 GLFTIGKGQRIGIFASAGVGKSTLLGMVSRFTSADINVIALIGERGREVREFIEDNLGKE 194

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+KS+VVVATSD+ P+ +  A   A+  A YFS KG +VL ++DS+TR A + REI   
Sbjct: 195 GLEKSIVVVATSDQPPLAKLRAVHVAMAYASYFSKKGKDVLFLVDSLTRLAMAQREIGLL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSI 331
            GE P ++GY  SVF+ LP+++E+ G +   +G+IT + +VL +G+   +DPIAD+    
Sbjct: 255 VGEPPTSKGYTPSVFTLLPKIIEQAG-TFHNQGSITGIYTVLFEGEELSSDPIADAAVGF 313

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGH+VL++ +A++  +P VDPL S+SRLA +   ++  +  +    +   ++E  D+  
Sbjct: 314 LDGHVVLSKEMAQKRVFPAVDPLKSISRLAPQLVPSEILEFQAQFIQIYALYKENEDMIN 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
           +G Y+PG    +D A+   P   D+L+QS ++ ++ E  F+++
Sbjct: 374 MGLYKPGSSQKIDLAIKYYPKCLDYLRQSINEPINLEKSFEDL 416


>gi|71734740|ref|YP_273549.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|42561997|gb|AAS20439.1| HrcN [Pseudomonas syringae pv. phaseolicola]
 gi|71555293|gb|AAZ34504.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320322950|gb|EFW79040.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329927|gb|EFW85915.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 449

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72
           DYS   V   G +S++  +   + C      +GD   V +   S  L +++    +   +
Sbjct: 18  DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126
             +G  + I +G  +   G   RI       G V++  G+P+ GD      G  D   ++
Sbjct: 74  SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDDRRETL 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+  
Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D ++  L+GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F
Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304
            ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   
Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+    
Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++  + L  L+  +++   +  +G Y+ G D + D AV     I +FL+Q
Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425


>gi|51102994|gb|AAT96141.1| HrcN [Pseudomonas viridiflava]
          Length = 450

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 156/407 (38%), Positives = 235/407 (57%), Gaps = 18/407 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    D   +  +G  + I 
Sbjct: 27  GRVSAVRGIL--LECKLPAAKVGDLCEVSKADGSLLLAEIVGFTPDCTLLSALGAPDGIQ 84

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135
           +G  +   G   RI       G V++  G+P+ GD +LG          ++ +++   P 
Sbjct: 85  VGATIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGD-ALGAFAGPDDRRTTLPVIADALPP 143

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISL 194
             R R+ +   TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+ DC D ++  L
Sbjct: 144 TQRPRISRALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGL 202

Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F  +G  VL
Sbjct: 203 IGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAIAEAFRERGQKVL 262

Query: 254 LILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +
Sbjct: 263 LLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++ 
Sbjct: 320 VLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRA 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 380 NNRLRQLMAAYKQVEMLLRLGEYQAGSDPVTDCAVKLNEDINAFLRQ 426


>gi|103488410|ref|YP_617971.1| ATPase FliI/YscN [Sphingopyxis alaskensis RB2256]
 gi|98978487|gb|ABF54638.1| ATPase FliI/YscN [Sphingopyxis alaskensis RB2256]
          Length = 443

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/372 (37%), Positives = 210/372 (56%), Gaps = 8/372 (2%)

Query: 54  KNSDN---LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINAL 109
           +++DN    G+V+        + P    + +  G  V   G   + P      GR+++A 
Sbjct: 53  RSADNDYVYGEVVGFRGHRSLVLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQ 112

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G P+DG  ++ K      +  +    + R RV +    G+R I+    +  GQR+ + AG
Sbjct: 113 GNPLDGRPAI-KSQFQWPLAGRKVNPLRRGRVTRALNMGVRAINGLLTVGEGQRVAIIAG 171

Query: 170 SGIGKSTLL-SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
           SG+GKS L+  M A ++C D +++ L+GER REV +F+E  L  ++ KKSVVV   +D  
Sbjct: 172 SGVGKSVLMGQMIAGTEC-DVIVVGLIGERSREVSDFVETKLPPDVRKKSVVVAVPADHP 230

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P+LR  A + A  IAE F ++G  VLL++DS+TR AH+ REI    GE P  +GYP SVF
Sbjct: 231 PLLRLRAAMRATAIAEAFRAEGKKVLLLIDSLTRVAHAQREIGLTLGEPPTMKGYPPSVF 290

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + +P L ER G  +   G++TA+ +VL DG + +DP+ DS R+I+DGHI+L+R LAE+G 
Sbjct: 291 ALIPSLCERAGIDKATGGSVTALYTVLADGGDIDDPVVDSARAIVDGHIILSRQLAEQGV 350

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D   S+SR    +  AD     +    L   +EE RD+ L+G Y  G D ILD+A+
Sbjct: 351 YPAIDVARSLSRTMADSVDADHAAAAARFRQLWSLYEENRDLMLMGAYVAGADPILDEAI 410

Query: 408 HQVPIIYDFLKQ 419
            +      F+ Q
Sbjct: 411 ARRADQLAFVSQ 422


>gi|259909714|ref|YP_002650070.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation
           pathway-hrcN protein [Erwinia pyrifoliae Ep1/96]
 gi|224965336|emb|CAX56868.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation
           pathway-hrcN protein [Erwinia pyrifoliae Ep1/96]
 gi|283479800|emb|CAY75716.1| ATP synthase in type III secretion system [Erwinia pyrifoliae DSM
           12163]
          Length = 454

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/445 (34%), Positives = 249/445 (55%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           + L Q A+   + L     V + G ++ I+ +   + C+     +GD   + +      L
Sbjct: 8   QRLTQWADQQQRRLERYSPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116
            +++  + + + +  +G  + IS G  +V  +    I  S    G V++  G+ ++  G 
Sbjct: 66  SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGR 125

Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FAG+G G
Sbjct: 126 SAFAEPGSQVRAVPVLNDAPPPTERPRIATPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF++  L + L+ ++V++ ATSD S + R 
Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRSSMERA 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV++ LPR
Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D
Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SR                L  L+  +++   +  +G Y+PG D + D AV+   I
Sbjct: 364 VLASLSRTMSNVVEPHHMMHAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+QS   + + D F++    L
Sbjct: 424 INQFLRQS---MRAPDPFEQTQYHL 445


>gi|326794367|ref|YP_004312187.1| ATPase, FliI/YscN family [Marinomonas mediterranea MMB-1]
 gi|326545131|gb|ADZ90351.1| ATPase, FliI/YscN family [Marinomonas mediterranea MMB-1]
          Length = 468

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 226/389 (58%), Gaps = 8/389 (2%)

Query: 45  LGDFVVHQGK-NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWC 102
           +GD    QG+ N   L ++I  + DIV +  +G  E IS+G  +  H+    I       
Sbjct: 64  IGDLCTIQGRGNHRVLAEIIGFSSDIVLLSALGALEGISVGASIMPHYQAHCIDSDESLL 123

Query: 103 GRVINALGKPIDGDD---SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           G V++  G+ + G     +L + + + +++        R R+     TG+R ID    + 
Sbjct: 124 GSVLDGFGRLLQGKRDAFTLEESEHTSKVIRDAIAPTQRPRISAPMPTGVRAIDGLLTIG 183

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218
            GQRIGVFAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L + L+ +SV
Sbjct: 184 EGQRIGVFAGAGCGKTTLLAELARNMPCDVIVFGLIGERGRELREFLDHELDEELRSRSV 243

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V +TSD + + R  A  TA  IAE F ++G  VLL++DS+TRFA + REI   +GE P 
Sbjct: 244 LVCSTSDRTSMERARAASTATAIAEGFRAQGKRVLLLIDSLTRFARAQREIGLAAGEPPG 303

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIV 337
             G+P SV++ LPRL+ER G  E   G+ITA+ +VL++GD    DP+AD VRS+LDGHI+
Sbjct: 304 RGGFPPSVYTMLPRLVERAGNMEG-AGSITALYTVLIEGDVIAGDPVADEVRSLLDGHII 362

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R LAE+  YP +D L S+SR        +  +  + L +L+  ++E   +  +G Y  
Sbjct: 363 LSRKLAEKNHYPAIDVLGSISRTMPNVTDPNHIQSAAVLRNLMSAYKEVEMLIRLGEYEQ 422

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           G D + D AV     I +FL+QS    SS
Sbjct: 423 GNDPLTDTAVALNGTILEFLQQSMRSPSS 451


>gi|330872913|gb|EGH07062.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 449

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/405 (38%), Positives = 233/405 (57%), Gaps = 14/405 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136
           +G  +   G   RI       G V++  G+P+ GD      G  D   ++ +++   P  
Sbjct: 84  VGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPT 143

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+G
Sbjct: 144 QRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLIG 203

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F ++G  VLL+
Sbjct: 204 ERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLL 263

Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +VL
Sbjct: 264 LDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVL 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           ++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++  +
Sbjct: 321 IEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRANN 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 381 RLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425


>gi|253688593|ref|YP_003017783.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755171|gb|ACT13247.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 455

 Score =  233 bits (595), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/400 (36%), Positives = 229/400 (57%), Gaps = 17/400 (4%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD   V +  +S  + +V+  + D  ++  +G  + I+ G  V   +    I  S    
Sbjct: 51  IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGATVTPLYQPHCIQVSERLL 110

Query: 103 GRVINALGKPIDGD---------DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           G V++  G+ ++ D          + G+   +  ++   PP  +R R+ +   TG+R +D
Sbjct: 111 GSVLDGFGRALEDDGESAFVEPGHATGR---TQPVLGDAPPPTSRPRISQPLPTGLRAVD 167

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
               +  GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D 
Sbjct: 168 GLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDE 227

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
           L+ ++V+V +TSD S + R  A  TA  IAE + ++G  VLLI+DS+TRFA + REI   
Sbjct: 228 LRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLA 287

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE     G P SV++ LPRL+ER G  + E G ITA+ SVL++ D+ NDP+AD VRS++
Sbjct: 288 LGEPQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLI 345

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIVL R LAE+G YP +D LAS+SR        D  +    +  L+  +++   +  +
Sbjct: 346 DGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRL 405

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           G Y+PG D++ D AV+    I  FL+QS  +     V Q+
Sbjct: 406 GEYQPGHDVLTDSAVNAHAEITQFLRQSMREPMPYGVIQQ 445


>gi|257487229|ref|ZP_05641270.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331009157|gb|EGH89213.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 449

 Score =  233 bits (595), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72
           DYS   V   G +S++  +   + C      +GD   V +   S  L +++    +   +
Sbjct: 18  DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126
             +G  + I +G  +   G   RI       G V++  G+P+ GD      G+ D   ++
Sbjct: 74  SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGQDDRRETL 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+  
Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D ++  L+GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F
Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304
            ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   
Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+    
Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ 425


>gi|238577792|gb|ACR46703.1| HrcN [Pseudomonas syringae pv. tabaci]
          Length = 450

 Score =  233 bits (595), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72
           DYS   V   G +S++  +   + C      +GD   V +   S  L +++    +   +
Sbjct: 19  DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 74

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126
             +G  + I +G  +   G   RI       G V++  G+P+ GD      G+ D   ++
Sbjct: 75  SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGQDDRRETL 134

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+  
Sbjct: 135 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 194

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D ++  L+GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F
Sbjct: 195 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 254

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304
            ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   
Sbjct: 255 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 311

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+    
Sbjct: 312 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 371

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 372 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ 426


>gi|331092965|ref|ZP_04588468.2| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331022862|gb|EGI02919.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 450

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/424 (37%), Positives = 240/424 (56%), Gaps = 19/424 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +       S  V  GD   V +   +  L +++    +   +  +G  + + 
Sbjct: 27  GRVSAVRGILLECKIPSAKV--GDLCEVSKADGTLMLAEIVGFTQECTLLSALGAPDGVQ 84

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS---LGKGD--LSMEIMSKVPPAM 136
           +G  +   G   RI       G V++  G+P+ GD      G  D   ++ +++   P  
Sbjct: 85  VGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLMGDCQGAFAGPDDRRTTLPVIADALPPT 144

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLV 195
            R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+ DC D ++  L+
Sbjct: 145 QRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGLI 203

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE + ++G  VLL
Sbjct: 204 GERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAIAEAYRARGQKVLL 263

Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           +LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE+  G+ITA+ +V
Sbjct: 264 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEE--GSITALYTV 320

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+         ++  
Sbjct: 321 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTDRAHQRAN 380

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      QE 
Sbjct: 381 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ---DLREPVPLQET 437

Query: 434 TKKL 437
             +L
Sbjct: 438 LDEL 441


>gi|168334483|ref|ZP_02692654.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 384

 Score =  233 bits (594), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 199/333 (59%), Gaps = 6/333 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           L +V+      + + P+G    I  G  V   G +  I       G+V++    P+DG  
Sbjct: 54  LAEVVGFREKNILLMPLGNNSGIGPGCPVISNGQKITIKVDESLLGKVVDWRANPLDGTP 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +  K   S+ I    P  + R+R+      GI+ ID    +  GQR+G+FAGSG+GKSTL
Sbjct: 114 NRCK--FSVPIEQDAPDPLKRKRIASQMVLGIKAIDGMLSIGSGQRMGIFAGSGVGKSTL 171

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236
           + M AR+   D  +I+L+GERGREVREF+E  L +  L +S+VVVATSD+  ++R  A  
Sbjct: 172 MGMIARNAISDINVIALIGERGREVREFLEKDLKEAGLARSIVVVATSDQPALIRLKAAK 231

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G  VL ++DS+TRF+ + REI  + GE PV+RGY  SVF  +P+LLER
Sbjct: 232 TATAIAEYFRDQGKQVLFLMDSLTRFSMAQREIGLSIGEPPVSRGYTPSVFGVMPKLLER 291

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G    E G IT + +VLVDGD+ N+P+ D+ R ILDGHI+L+R +A    YP +D LAS
Sbjct: 292 TG--NNEIGGITGLYTVLVDGDDFNEPVTDTARGILDGHIMLSRKIAHRAHYPAIDVLAS 349

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +SR+     SA+ ++L + +   +  + +  D+
Sbjct: 350 ISRVMGDVISAEHRELATIIKRHMAVYADVEDL 382


>gi|330984969|gb|EGH83072.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 449

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 157/415 (37%), Positives = 236/415 (56%), Gaps = 16/415 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72
           DYS   V   G +S++  +   + C      +GD   V +   S  L +++    +   +
Sbjct: 18  DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126
             +G  + I +G  +   G   RI       G V++  G+P+ GD      G  D   ++
Sbjct: 74  SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDDRRETL 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+  
Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D ++  L+GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F
Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304
            ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   
Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+    
Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ 425


>gi|170698149|ref|ZP_02889228.1| ATPase, FliI/YscN family [Burkholderia ambifaria IOP40-10]
 gi|170136914|gb|EDT05163.1| ATPase, FliI/YscN family [Burkholderia ambifaria IOP40-10]
          Length = 434

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/297 (42%), Positives = 184/297 (61%), Gaps = 5/297 (1%)

Query: 125 SMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +MEI   +PP   R+R +E    TG+R ID       GQR+G+FA +G GK++L++M   
Sbjct: 122 AMEI-DALPPDFARRRPIEHCMPTGVRAIDGLLTCGVGQRLGIFAAAGCGKTSLMNMLID 180

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               D  +++LVGERGREV EF+E       + ++VVV ATSD S + R  A L A T+A
Sbjct: 181 HASADVYVVALVGERGREVSEFVERLRSSERRDRTVVVYATSDRSSVDRCNAALLATTVA 240

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NV+L LDS+TR+A ++R++A  +GE P  RGYP SVF  +PRLLER G    
Sbjct: 241 EYFRDCGLNVMLFLDSMTRYARALRDVALAAGEPPARRGYPASVFETMPRLLERAG--RT 298

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA  +VL++ ++  DPI D VRSILDGHI L+R LA +G +P +D L S SRL +
Sbjct: 299 AAGSITAFYTVLLENEDEPDPIGDEVRSILDGHIYLSRKLASQGHFPAIDVLQSASRLLE 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +AD +     +   + R +E + +  +G YR G +   D+++ + P++  FL+Q
Sbjct: 359 AVTTADHQARARQIRGHLARLDEMQILVDLGEYRTGENPDNDRSMDKRPVLEQFLQQ 415


>gi|77463627|ref|YP_353131.1| flagellum-specific ATPase FliI [Rhodobacter sphaeroides 2.4.1]
 gi|1293928|gb|AAB07344.1| FliI [Rhodobacter sphaeroides]
 gi|77388045|gb|ABA79230.1| FliI, Flagellum-specific ATPase [Rhodobacter sphaeroides 2.4.1]
          Length = 442

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 195/349 (55%), Gaps = 16/349 (4%)

Query: 87  VFHWGRFRISPSA-------CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136
           V    R R+ P            GRVI+A G P+DG    D +G+  L+  +M+     +
Sbjct: 81  VIAGARVRLVPGGQMAAVGPALLGRVIDAEGAPLDGLPAPDCMGEWPLAGRVMNP----L 136

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  V +    G+R I+    +  GQRIG+ AGSG+GKS L+ M  R    D +++ L+G
Sbjct: 137 ARTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIG 196

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER REV  F    + G+  +K  +V   +D SP+LR  A   A  IAE+F S+G  VLLI
Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR AH+ RE+    GE P A+GYP SV S +P L+ER GP    +G ITA+ +VL 
Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316

Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           DGD+  NDP+ D+ R+ILDGH VL+R   + G YP +D   SVSR  +       ++  +
Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            L  LI  + + RD+ L+GGY  G D  LD+AV   P I   + Q P +
Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425


>gi|82795273|gb|ABB91642.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tagetis]
          Length = 449

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/405 (37%), Positives = 231/405 (57%), Gaps = 14/405 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +      L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGGMLLAEIVGFTQECTLLSALGAPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136
           +G  +   G   RI       G V++  G+P+ GD      G  D   ++ +++   P  
Sbjct: 84  VGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPEDRRETLPVIADALPPT 143

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+G
Sbjct: 144 QRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMGCDVIVFGLIG 203

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F ++G  VLL+
Sbjct: 204 ERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLL 263

Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+ITA+ +VL
Sbjct: 264 LDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVL 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           ++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++  +
Sbjct: 321 IEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRANN 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q
Sbjct: 381 RLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425


>gi|312597797|gb|ADQ89912.1| RscN [Pseudomonas fluorescens]
          Length = 452

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/343 (41%), Positives = 210/343 (61%), Gaps = 14/343 (4%)

Query: 103 GRVINALGKPI-DGDDSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G+V++  G+P+ DG      G   +   E++ + P    R R+++  +TG+R ID    L
Sbjct: 109 GQVLDGFGRPLLDGGTGAFAGPHVLHASEVIGEAPAPTARPRIQRPLRTGVRAIDGPLTL 168

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216
             GQR+G+FAG+G GK+TLL+  AR+ DC D ++  L+GERGRE+REF++  L D L+ +
Sbjct: 169 GEGQRVGLFAGAGCGKTTLLAEIARNVDC-DVIVFGLIGERGRELREFLDHELDDELRAR 227

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +V+V ATSD S + R  A  TA  +AE F ++G  VLL++DS+TRFA + REI   +GE 
Sbjct: 228 AVLVCATSDRSSMERARAAFTATALAEGFRARGQRVLLLIDSLTRFARAQREIGLAAGE- 286

Query: 277 PVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           P+ RG  P SV+  LPRL+ER G + +  G ITA  +VL++ D+ NDP+AD VRS+LDGH
Sbjct: 287 PLGRGGLPPSVYGLLPRLVERAGLTNE--GAITAFYTVLIEQDSMNDPVADEVRSLLDGH 344

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+R LAE G YP +D LAS+SR       A+  +   +L  L+  +E+   +  +G Y
Sbjct: 345 IVLSRKLAERGHYPAIDVLASLSRTLANVAEAEHLRAGINLRRLLSAYEQIELMLRLGEY 404

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + G D + D AV     +  FL+Q   DL   + F      LQ
Sbjct: 405 QAGADPLTDLAVESRGALDAFLRQ---DLREPEPFASTLAHLQ 444


>gi|163783985|ref|ZP_02178950.1| flagellum-specific ATP synthase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880745|gb|EDP74284.1| flagellum-specific ATP synthase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 440

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 210/339 (61%), Gaps = 11/339 (3%)

Query: 102 CGRVINALGKPIDGDDS--LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            G +I+  G P++  +     + DL  E ++     + R+R+ +    G+RVI+    + 
Sbjct: 91  IGNIIDPFGNPLNNKNLKLFDRVDLYQEPVN----PLQRKRITEVLDIGVRVINSLFTIG 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
            GQR+G+ AG+G+GKS+LL M A+    D  +I+L+GERGREVREFIED LGD  LKKSV
Sbjct: 147 KGQRVGIVAGAGVGKSSLLGMIAKFSQADLNVIALIGERGREVREFIEDNLGDEGLKKSV 206

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVATSD+ P+ +  A  TA  IA YF++KG +V L+ DS+TR A + REI   +GE P 
Sbjct: 207 VVVATSDQPPLAKIRAAHTANAIASYFANKGKSVNLLFDSLTRLAMAQREIGLIAGEPPT 266

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIV 337
            +GY  SVF+ LP+++E  G    +KG+IT   +VLV+GD+  +DP+AD+  S LDGHI+
Sbjct: 267 TKGYTPSVFNLLPKIIEVAG--NFDKGSITGFYTVLVEGDDVSSDPVADAAISFLDGHII 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L+R +A++  YP VD L S+SRL  +  S + KK  S +  L   + E  D+  +G Y+ 
Sbjct: 325 LSREIADKRIYPAVDILRSISRLMPQLVSDEIKKYQSIIMDLESTYREAEDMINLGLYKK 384

Query: 398 GVDLILDKAVHQVPIIYDFLKQS-PSDLSSEDVFQEITK 435
           G +  +D A+     I +F++Q+    ++ E+   E+ K
Sbjct: 385 GSNPKMDIALKFHYSIINFIRQNFNKKVNFEESINELNK 423


>gi|126462459|ref|YP_001043573.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17029]
 gi|332558483|ref|ZP_08412805.1| FliI/YscN family ATPase [Rhodobacter sphaeroides WS8N]
 gi|126104123|gb|ABN76801.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17029]
 gi|332276195|gb|EGJ21510.1| FliI/YscN family ATPase [Rhodobacter sphaeroides WS8N]
          Length = 442

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 195/349 (55%), Gaps = 16/349 (4%)

Query: 87  VFHWGRFRISPS-------ACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136
           V    R R+ P        +   GRVI+A G P+DG    D  G+  L+  +M+     +
Sbjct: 81  VIAGARVRLVPGGQMAAVGSALLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNP----L 136

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  V +    G+R I+    +  GQRIG+ AGSG+GKS L+ M  R    D +++ L+G
Sbjct: 137 ARTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIG 196

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER REV  F    + G+  +K  +V   +D SP+LR  A   A  IAE+F S+G  VLLI
Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR AH+ RE+    GE P A+GYP SV S +P L+ER GP    +G ITA+ +VL 
Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316

Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           DGD+  NDP+ D+ R+ILDGH VL+R   + G YP +D   SVSR  +       ++  +
Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            L  LI  + + RD+ L+GGY  G D  LD+AV   P I   + Q P +
Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425


>gi|51103198|gb|AAT96339.1| HrcN [Pseudomonas viridiflava]
          Length = 451

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 9/332 (2%)

Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G V++  G+ + GD     +L     +  ++   PPA  R R++    TG+R ID    L
Sbjct: 108 GAVLDGFGRSLSGDGPSAFALSGAVGAQPVIRDAPPATERPRIDAPLSTGLRSIDGLLTL 167

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAG+G GK+TLL+  AR+   + ++  L+GERGRE+REF++  L + L+ ++
Sbjct: 168 GEGQRVGIFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRT 227

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V+V +TSD S + R  A  TA  IAE F  +G + LLI+DS+TRFA + REI   SGE P
Sbjct: 228 VLVCSTSDRSSMERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286

Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RG  P SV+S LPRL+ER G        ITA+ SVL++ D+ NDPIAD VRS+LDGHI
Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTHDAAITALYSVLIEQDSMNDPIADEVRSLLDGHI 344

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP VD L S+SR        ++    + +  L+  +++   +  +G Y+
Sbjct: 345 VLSRKLAERGHYPAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQ 404

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           PG D + D AV     I  FL+QS  D  S D
Sbjct: 405 PGNDPLTDFAVQSRDQIMGFLQQSLRDPVSLD 436


>gi|51103157|gb|AAT96299.1| HrcN [Pseudomonas viridiflava]
          Length = 451

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 9/332 (2%)

Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G V++  G+ + GD     +L     +  ++   PPA  R R++    TG+R ID    L
Sbjct: 108 GAVLDGFGRSLSGDGPSAFALSGAVGAQPVIRDAPPATERPRIDTPLSTGLRSIDGLLTL 167

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAG+G GK+TLL+  AR+   + ++  L+GERGRE+REF++  L + L+ ++
Sbjct: 168 GEGQRVGIFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRT 227

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V+V +TSD S + R  A  TA  IAE F  +G + LLI+DS+TRFA + REI   SGE P
Sbjct: 228 VLVCSTSDRSSMERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286

Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RG  P SV+S LPRL+ER G        ITA+ SVL++ D+ NDPIAD VRS+LDGHI
Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTHDAAITALYSVLIEQDSMNDPIADEVRSLLDGHI 344

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP VD L S+SR        ++    + +  L+  +++   +  +G Y+
Sbjct: 345 VLSRKLAERGHYPAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQ 404

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           PG D + D AV     I  FL+QS  D  S D
Sbjct: 405 PGNDPLTDFAVQSRDRIMGFLQQSLRDPVSLD 436


>gi|51103115|gb|AAT96258.1| HrcN [Pseudomonas viridiflava]
          Length = 451

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 9/332 (2%)

Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G V++  G+ + GD     +L     +  ++   PPA  R R++    TG+R ID    L
Sbjct: 108 GAVLDGFGRSLSGDGPSAFALSGAVGAQPVIRDAPPATERPRIDTPLSTGLRSIDGLLTL 167

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217
             GQR+G+FAG+G GK+TLL+  AR+   + ++  L+GERGRE+REF++  L + L+ ++
Sbjct: 168 GEGQRVGIFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRT 227

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V+V +TSD S + R  A  TA  IAE F  +G + LLI+DS+TRFA + REI   SGE P
Sbjct: 228 VLVCSTSDRSSMERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286

Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RG  P SV+S LPRL+ER G        ITA+ SVL++ D+ NDPIAD VRS+LDGHI
Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTHDAAITALYSVLIEQDSMNDPIADEVRSLLDGHI 344

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP VD L S+SR        ++    + +  L+  +++   +  +G Y+
Sbjct: 345 VLSRKLAERGHYPAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQ 404

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           PG D + D AV     I  FL+QS  D  S D
Sbjct: 405 PGNDPLTDFAVQSRDRIMGFLQQSLRDPVSLD 436


>gi|319790418|ref|YP_004152051.1| ATPase, FliI/YscN family [Thermovibrio ammonificans HB-1]
 gi|317114920|gb|ADU97410.1| ATPase, FliI/YscN family [Thermovibrio ammonificans HB-1]
          Length = 446

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/379 (39%), Positives = 217/379 (57%), Gaps = 8/379 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACW 101
           VC+GDF    GK      +V+        +      + I+ G+ V       ++  S   
Sbjct: 34  VCIGDFCTVDGKLP---AEVVGFKEGKALLMAYSDTDGITTGNPVEVKLSGLKLGVSDEL 90

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G VI+  GK ++G +     D        V P M R+R+ +    GIRVI+    +  G
Sbjct: 91  LGAVIDPFGKVLNGKE-FTPTDFVPLKPDPVNP-MERERIREPLDLGIRVINGLLTVGRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
           QR+GVFAG+G+GKSTLL M AR    D  +++L+GERGREVREF+ED LGD + +SVVVV
Sbjct: 149 QRLGVFAGAGVGKSTLLGMVARYTEADVTVVALIGERGREVREFLEDALGDGINRSVVVV 208

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           ATSD  P+ +  A   A  +AEYFS++G  VLL+LDS+TRFA + REI  + GE P ++G
Sbjct: 209 ATSDMPPLAKVRAAYAAFAVAEYFSARGKKVLLLLDSLTRFAMAQREIGLSVGEPPTSKG 268

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNR 340
           Y  SVFS + RL+ER G +    G+IT + +VLV+GD+ + DP+AD+   +LDGHIVL+R
Sbjct: 269 YTPSVFSAMARLVERAG-NFGSGGSITGIFTVLVEGDDISLDPVADAAVGLLDGHIVLSR 327

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            +A    +P VD L S+SRL  +    +     S +  L   + E  D+  +G Y+ G  
Sbjct: 328 EMANRRLFPAVDVLKSISRLTPQIVPEEILTAQSVIFELESIYRENSDLIQLGLYKKGTS 387

Query: 401 LILDKAVHQVPIIYDFLKQ 419
            ++D A+     +  +++Q
Sbjct: 388 PLIDLAIWAHSRLEGYIRQ 406


>gi|330812434|ref|YP_004356896.1| type III secretion protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380542|gb|AEA71892.1| putative type III secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 452

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/343 (41%), Positives = 209/343 (60%), Gaps = 14/343 (4%)

Query: 103 GRVINALGKPI-DGDDSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G+V++  G+P+ DG      G   +   E++ + P    R R+++   TG+R ID    L
Sbjct: 109 GQVLDGFGRPLLDGGTGAFAGPHVLHASEVIGEAPAPTARPRIQRPLMTGVRAIDGPLTL 168

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216
             GQR+G+FAG+G GK+TLL+  AR+ DC D ++  L+GERGRE+REF++  L D L+ +
Sbjct: 169 GEGQRVGLFAGAGCGKTTLLAEIARNVDC-DVIVFGLIGERGRELREFLDHELDDELRAR 227

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +V+V ATSD S + R  A  TA  +AE F ++G  VLL++DS+TRFA + REI   +GE 
Sbjct: 228 AVLVCATSDRSSMERARAAFTATALAEGFRARGQRVLLLIDSLTRFARAQREIGLAAGE- 286

Query: 277 PVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           P+ RG  P SV+  LPRL+ER G + +  G ITA  +VL++ D+ NDP+AD VRS+LDGH
Sbjct: 287 PLGRGGLPPSVYGLLPRLVERAGLTNE--GAITAFYTVLIEQDSMNDPVADEVRSLLDGH 344

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+R LAE G YP +D LAS+SR       A+  +   +L  L+  +E+   +  +G Y
Sbjct: 345 IVLSRKLAERGHYPAIDVLASLSRTLANVAEAEHLRAGINLRRLLSAYEQIELMLRLGEY 404

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + G D + D AV     +  FL+Q   DL   + F      LQ
Sbjct: 405 QAGADPLTDLAVESRGALDAFLRQ---DLREPEPFASTLAHLQ 444


>gi|221639469|ref|YP_002525731.1| FliI [Rhodobacter sphaeroides KD131]
 gi|221160250|gb|ACM01230.1| FliI [Rhodobacter sphaeroides KD131]
          Length = 442

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 194/349 (55%), Gaps = 16/349 (4%)

Query: 87  VFHWGRFRISPSACWC-------GRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136
           V    R R+ P            GRVI+A G P+DG    D  G+  L+  +M+     +
Sbjct: 81  VIAGARVRLVPGGQMAAVGSGLLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNP----L 136

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  V +    G+R I+    +  GQRIG+ AGSG+GKS L+ M  R    D +++ L+G
Sbjct: 137 ARTAVNRPLDVGVRAINAALTVGQGQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIG 196

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER REV  F    + G+  +K  +V   +D SP+LR  A   A  IAE+F S+G  VLLI
Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR AH+ RE+    GE P A+GYP SV S +P L+ER GP    +G ITA+ +VL 
Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316

Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           DGD+  NDP+ D+ R+ILDGH VL+R   + G YP +D   SVSR  +       ++  +
Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            L  LI  + + RD+ L+GGY  G D  LD+AV   P I   + Q P +
Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425


>gi|76152312|gb|ABA39813.1| HrcN [Erwinia pyrifoliae]
          Length = 454

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/445 (34%), Positives = 245/445 (55%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           + L Q A    + L     V + G ++ I+ +   + C+     +GD   + +      L
Sbjct: 8   QRLTQWAHQQQRRLERYSPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116
            +++  + + + +  +G  + IS G  +V  +   RI  S    G V++  G+ ++  G 
Sbjct: 66  SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHRICVSEQLLGSVLDGFGRALEPGGH 125

Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FAG+G G
Sbjct: 126 SAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF++  L + L  ++V++ ATSD   + R 
Sbjct: 186 KTTLLAELARTPRCDAIVFGLIGERGRELREFLDHELDEELLSRTVLLCATSDRISMERA 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G +VLLI+DS TRFA + REI    GE P   G P SV++ LPR
Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSFTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G  + ++G ITA+ +VL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D
Sbjct: 306 LVERAG--QTQQGAITALYTVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            LAS+SR                L  L+  +++   +  +G Y+PG D + D AV    I
Sbjct: 364 VLASLSRTMSNVVEPHHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVKPNDI 423

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+QS   + + D F++    L
Sbjct: 424 INRFLRQS---MRAPDPFEQTQYHL 445


>gi|34500873|gb|AAQ73901.1| HrcN [Pectobacterium carotovorum subsp. carotovorum]
          Length = 455

 Score =  229 bits (583), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 145/397 (36%), Positives = 227/397 (57%), Gaps = 11/397 (2%)

Query: 45  LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD   V +  +S  + +V+  + D  ++  +G  + I+ G  V   +    I  S    
Sbjct: 51  IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGATVTPLYQPHCIQVSDRLL 110

Query: 103 GRVINALGKPID--GDDSL----GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           G V++  G+ ++  G+ +          +  ++   PP  +R R+ +   TG+R +D   
Sbjct: 111 GSVLDGFGRALEAGGESAFVEPGHATGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 170

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
            +  GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L D L+ 
Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRS 230

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+V +TSD S + R  A  TA  IAE + ++G  VLLI+DS+TRFA + REI    GE
Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLALGE 290

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
                G P SV++ LPRL+ER G  + E G ITA+ SVL++ D+ NDP+AD VRS++DGH
Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R LAE+G YP +D LAS+SR        +  +    +  L+  +++   +  +G Y
Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTEHTRNAGGVRRLMAAYKQVEMLIRLGEY 408

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +PG D + D AV+    I  FL+QS  +     V Q+
Sbjct: 409 QPGHDELTDSAVNAQAEITQFLRQSMREPMPYGVIQQ 445


>gi|269960166|ref|ZP_06174542.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3]
 gi|269835137|gb|EEZ89220.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3]
          Length = 350

 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/283 (43%), Positives = 182/283 (64%), Gaps = 5/283 (1%)

Query: 61  QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  +  + Y+ P+  +G   +   ++   G   +  S+ W GRV+N LG+P D    L
Sbjct: 67  QVVGFDHTVAYLMPIRCLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGLPL 126

Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             GD +S+E     P  + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+
Sbjct: 127 KGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLM 184

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M  ++   D +++ L+GERGREVREF+E  L  +  KK+++V A +DESP++R  A L 
Sbjct: 185 GMITQNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATLL 244

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER 
Sbjct: 245 CHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERA 304

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           G SE   G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R
Sbjct: 305 GNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSR 347


>gi|1272678|emb|CAA65834.1| FliI protein [Rhodobacter sphaeroides]
          Length = 442

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/349 (39%), Positives = 194/349 (55%), Gaps = 16/349 (4%)

Query: 87  VFHWGRFRISPS-------ACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136
           V    R R+ P        +   GRVI+A G P+DG    D  G+  L+  +M+     +
Sbjct: 81  VIAGARVRLVPGGQMAAVGSALLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNP----L 136

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  V +    G+R I+    +  GQRIG+ AGSG GKS L+ M  R    D +++ L+G
Sbjct: 137 ARTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGEGKSVLIEMMTRYTAADVIVVGLIG 196

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER REV  F    + G+  +K  +V   +D SP+LR  A   A  IAE+F S+G  VLLI
Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR AH+ RE+    GE P A+GYP SV S +P L+ER GP    +G ITA+ +VL 
Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316

Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           DGD+  NDP+ D+ R+ILDGH VL+R   + G YP +D   SVSR  +       ++  +
Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            L  LI  + + RD+ L+GGY  G D  LD+AV   P I   + Q P +
Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425


>gi|187919905|ref|YP_001888936.1| ATPase, FliI/YscN family [Burkholderia phytofirmans PsJN]
 gi|187718343|gb|ACD19566.1| ATPase, FliI/YscN family [Burkholderia phytofirmans PsJN]
          Length = 442

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/374 (35%), Positives = 206/374 (55%), Gaps = 12/374 (3%)

Query: 58  NLGQVIRINLDIVYICPV----GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113
            +G+V+  + +   + P+    G+ +   +      WGR     +    GRV++ LG+P+
Sbjct: 57  QIGEVVGFSQEGALVVPLDGLAGLSDITQVEGCGLSWGRL---DALDMLGRVVDGLGRPL 113

Query: 114 DGD--DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           DG           SM I+S + P ++R  +   F TG+RVID       GQR+G+FA +G
Sbjct: 114 DGRVAPKAVSAQHSMNILSHINP-LDRPVISTPFPTGVRVIDGLLSCGVGQRVGIFAAAG 172

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILR 231
            GKSTL+ M A     D ++++L+GERGREV EFI D+LG     S+V+ +TS+     R
Sbjct: 173 GGKSTLMGMIANGASVDAIVVALIGERGREVGEFIHDHLGARRASSIVIASTSERPAAER 232

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A   A  +A    ++G +VLL+ DS+TR+A ++RE+    GE PV RGYP  VF+ELP
Sbjct: 233 IKAAELACRVASDLRAEGKHVLLLFDSLTRYARALREVGLAVGEPPVRRGYPPRVFAELP 292

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RL+E  G +   +G +TA  +VL + +  +DP+A+  RS+LDGHI L+  L   G YP +
Sbjct: 293 RLIETAGLT--RQGAVTAFFTVLAEDEEMSDPVAEEARSLLDGHIQLSGRLGGAGHYPAI 350

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D L S SR+  +  S   +     +   + R++E   +  IG YR G D   D A+ +  
Sbjct: 351 DVLKSKSRVMTRVTSRAHRDDAGRVRGWMSRYQEVELLLQIGEYRRGNDSASDLAIDRHE 410

Query: 412 IIYDFLKQSPSDLS 425
           +I  FL+Q   + S
Sbjct: 411 MIERFLRQRHDEYS 424


>gi|251789497|ref|YP_003004218.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya zeae Ech1591]
 gi|247538118|gb|ACT06739.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya zeae Ech1591]
          Length = 459

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/396 (37%), Positives = 229/396 (57%), Gaps = 11/396 (2%)

Query: 45  LGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD  +V +  +S  L +++  +    ++  +G  + I+ G +V   +    +  S    
Sbjct: 54  IGDLCLVERNDSSQVLAEIVGFSPSNTFLSALGALDGIAQGAVVTPLYQPHCVQVSDALF 113

Query: 103 GRVINALGKPID-GDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           G V++  G+P++ G  S  +  GDL+   M ++   PP   R R+     TG+R ID   
Sbjct: 114 GSVLDGFGRPLEEGGHSAFVEPGDLNANPMPVIGDAPPPTERPRIADPLPTGMRAIDGLL 173

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
            +  GQR+GVFAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L + L+ 
Sbjct: 174 TIGCGQRVGVFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEQLRS 233

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+V +TSD S + R  A  TA  IAE F + G  VLLI+DS+TRFA + REI    GE
Sbjct: 234 RTVLVCSTSDRSSMERARAAFTATAIAEAFRAAGKQVLLIIDSLTRFARAQREIGLALGE 293

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
                G P SV++ LPRL+ER G  +  +G ITA+ SVL++ D+ NDP+AD VRS++DGH
Sbjct: 294 PQGRGGLPPSVYTLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGH 351

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+R LAE   YP +D L S+SR        +  +  +++  L+  +++   +  +G Y
Sbjct: 352 IVLSRRLAERNHYPAIDVLMSLSRTMSNVVEREHTRNANAVRRLMAAYKQVEMLIRLGEY 411

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +PG D + D AV     I  FL+Q+  +  S +  Q
Sbjct: 412 QPGHDALTDAAVSANDDINRFLQQAMREPQSFEFIQ 447


>gi|323978514|gb|EGB73596.1| ATPase FliI/YscN family protein [Escherichia coli TW10509]
          Length = 430

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 198/332 (59%), Gaps = 5/332 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149
           +  I  S  + G V+NA G+ ++    +  GD  ++ ++ ++PP+   +RV     +T I
Sbjct: 82  QLTIQISDAFLGSVLNASGQIMERFVPVTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           RVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E  
Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
               N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R+
Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D +
Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ + 
Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +G YR G +   D A++  P + ++LKQS
Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411


>gi|323966659|gb|EGB62091.1| ATPase FliI/YscN family protein [Escherichia coli M863]
 gi|327251620|gb|EGE63306.1| type III secretion system ATPase [Escherichia coli STEC_7v]
          Length = 430

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 198/332 (59%), Gaps = 5/332 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149
           +  I  S  + G V+NA G+ ++    +  GD  ++ ++ ++PP+   +RV     +T I
Sbjct: 82  QLTIQISDAFLGSVLNASGQIMERFVPVTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           RVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E  
Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
               N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R+
Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D +
Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ + 
Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +G YR G +   D A++  P + ++LKQS
Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411


>gi|14588839|emb|CAC43015.1| HrcN protein [Pantoea agglomerans]
          Length = 454

 Score =  225 bits (574), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/294 (43%), Positives = 188/294 (63%), Gaps = 3/294 (1%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           ++S  PP   R R++    TG+R ID    + +GQR+G+FAG+G GK+TLL+  AR+   
Sbjct: 140 VLSDAPPPTERPRIDTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCGKTTLLAELARNTPC 199

Query: 188 DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D ++  L+GERGRE+REFI+  L + L K++V++ ATSD S + R  A  TA  IAE F 
Sbjct: 200 DVIVFGLIGERGRELREFIDHELDETLGKRTVLLCATSDRSSMERARAAFTATAIAEAFR 259

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           ++G +VLLI+DS+TRF  + REI    GE P   G P SV++ L RL+ER G  +  +G 
Sbjct: 260 AEGKSVLLIIDSLTRFERAQREIGIALGEPPGRGGLPPSVYTLLLRLVERAG--QTRQGA 317

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D LAS+SR       
Sbjct: 318 ITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAIDILASLSRTMSNVVD 377

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +   S+  L+  +++   +  +G Y+PG D + D AV+   +I  FL+QS
Sbjct: 378 QEHLRQAGSIRSLMAAYKQVEMLIRLGEYQPGHDSLADAAVNANDVINHFLRQS 431


>gi|34498083|ref|NP_902298.1| ATP synthase SpaL [Chromobacterium violaceum ATCC 12472]
 gi|34103938|gb|AAQ60298.1| surface presentation of antigens, secretory proteins
           [Chromobacterium violaceum ATCC 12472]
          Length = 429

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/299 (42%), Positives = 178/299 (59%), Gaps = 3/299 (1%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G  + +I S  PP   R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M 
Sbjct: 113 GGEARDIDSDPPPYSRRVGVREPLATGVRAIDGLLTCGVGQRVGIFASAGCGKTMLMHML 172

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
                 D  +I L+GERGREV EF E   G D   + V+V ATSD   + R  A L A T
Sbjct: 173 IEQADADVFVIGLIGERGREVTEFAEALRGSDKRDRCVLVFATSDFPSVDRCNAALLATT 232

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G  V+L +DS+TR+A ++R++A  +GE P  RGYP SVF  LPRLLER  P 
Sbjct: 233 VAEYFRDQGKKVVLFVDSMTRYARALRDVALAAGEPPARRGYPASVFDSLPRLLER--PG 290

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA  +VL++ D+  DP+AD +RSILDGHI L+R LA +G YP +D L S SR+
Sbjct: 291 ATGAGSITAFYTVLLESDDEPDPMADEIRSILDGHIYLSRKLAGQGHYPAIDVLKSASRV 350

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           A +     +++  +++  L+ R EE +    +G YRPG +   D+A+     +  +L+Q
Sbjct: 351 AGQVTDTGQQQAAAAVRGLLARLEELQVFIDLGEYRPGENADNDRAMSLRDPLRRWLRQ 409


>gi|299822292|ref|ZP_07054178.1| H(+)-transporting two-sector ATPase [Listeria grayi DSM 20601]
 gi|299815821|gb|EFI83059.1| H(+)-transporting two-sector ATPase [Listeria grayi DSM 20601]
          Length = 436

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 200/331 (60%), Gaps = 11/331 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDD 117
           L +VI I  +   + P    +++S GD V+ +     I  S    G+V++A G+ I+GD 
Sbjct: 53  LCEVISIEKENNMLLPFNQTDKVSAGDWVYPNDAEVTIPASGELLGKVLSATGEVINGDP 112

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           +     +++E     PP  A  RQ +    +TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 113 AGNTQKIALE----APPINAFARQEITDSLETGIKAIDGMLTIGIGQKIGIFAGSGVGKS 168

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M AR+   D  +I+LVGERGREV++FI   LG+  +KKS++V ATSDES +++  A
Sbjct: 169 TLLGMIARNAKVDVNVIALVGERGREVKDFIRKDLGEEGMKKSIIVAATSDESHLMQLRA 228

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAE+F  +G NVLL++DSITRFA + R +   + +LP+  G    + S + +LL
Sbjct: 229 AKLATSIAEHFRDQGKNVLLMMDSITRFADARRSVDIATKDLPIG-GKTLLMESYMKKLL 287

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  E G+IT + +VLVDGD+ N PI D  R ILDGHI+L R LA   +YP +  L
Sbjct: 288 ERSGKT--ETGSITGIYTVLVDGDDMNGPIPDLARGILDGHIILKRELAIMNQYPAISVL 345

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            S+SR+ ++  + +     + L   +  F+E
Sbjct: 346 DSISRVMEEITTKEHFAASNKLREWLSTFQE 376


>gi|229058383|ref|ZP_04196767.1| Flagellum-specific ATP synthase [Bacillus cereus AH603]
 gi|228719892|gb|EEL71482.1| Flagellum-specific ATP synthase [Bacillus cereus AH603]
          Length = 429

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/380 (39%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P G  E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFGQTEKVCYGDAVTLIEEDVVVPRGNHLLGKVLSANGEVLNENT 110

Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
                ++ ++ I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GK
Sbjct: 111 E----NIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  +KKSVVVVATSDES +++  
Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLR 226

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + K  ++V  
Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFKCKNKVEA 403

Query: 413 IYDFLKQSPSD-LSSEDVFQ 431
           I  FLKQ  +D    EDV Q
Sbjct: 404 INTFLKQGRTDSFQFEDVVQ 423


>gi|161502062|ref|YP_001569174.1| ATP synthase SpaL [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160863409|gb|ABX20032.1| hypothetical protein SARI_00079 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 431

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/297 (42%), Positives = 177/297 (59%), Gaps = 3/297 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           PP  +R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M       D  +I
Sbjct: 124 PPYASRVGVHEPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTEADVFVI 183

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGREV EF++     + K K V+V ATSD   + R  A   A T+AEYF  +G  
Sbjct: 184 GLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRDQGKR 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER  P     G+ITA  
Sbjct: 244 VVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATGDGSITAFY 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+  +  +A   K
Sbjct: 302 TVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVTTATHAK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             SS+  L+ R EE +    +G YRPG ++  D+A+     +  +L Q  +  SS D
Sbjct: 362 QASSVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVTQYSSFD 418


>gi|85060066|ref|YP_455768.1| ATP synthase SpaL [Sodalis glossinidius str. 'morsitans']
 gi|45504771|gb|AAS66861.1| InvC [Sodalis glossinidius]
 gi|84780586|dbj|BAE75363.1| type III secretion apparatus SpaL/InvC [Sodalis glossinidius str.
           'morsitans']
          Length = 431

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 198/349 (56%), Gaps = 27/349 (7%)

Query: 75  VGIGEEISLGDLVFHWGRF--RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           V +G+ + LG ++   GR   R++P    C R   A+  P                    
Sbjct: 86  VEVGDAL-LGTIIQPSGRISERLAPPPVRCNREWRAIDAP-------------------A 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-SMFARSDCFDKVI 191
           P    R  V + F TGIR  D       GQR+G+F+ +G GK+ L+  + A+SD  +  +
Sbjct: 126 PDYRQRAGVRQPFITGIRAFDGLLTCGIGQRVGIFSSAGCGKTMLMHQLIAQSDA-EVFV 184

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV EF+E       + + V+V ATS+ + + R  A L A T+AEYF  +G 
Sbjct: 185 IGLVGERGREVTEFVETLRHSPRRHQCVLVYATSNYASLERCNAALVATTVAEYFRDQGR 244

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            V+L LDS+TRFA ++R++A  +GE P  RGYP SVF  LPR+LER  P     G+ITA 
Sbjct: 245 RVVLFLDSLTRFARALRDVALAAGEAPARRGYPASVFDALPRVLER--PGNSLSGSITAF 302

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL++GD+  DPIAD +RSILDGHI L+R L+    YP +D L S SR+A +   A ++
Sbjct: 303 YTVLLEGDDEPDPIADEIRSILDGHIYLSRKLSAASHYPAIDILHSASRVAGQVTDARQQ 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            L  ++  L+ R EE + +  +G YR G +   D+A  Q   ++DFL+Q
Sbjct: 363 ALAGAMRGLLTRLEEMQTLIDLGEYRLGDNAENDRAHAQKQALWDFLRQ 411


>gi|284922808|emb|CBG35896.1| type III secretion system protein [Escherichia coli 042]
          Length = 439

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 195/326 (59%), Gaps = 9/326 (2%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIF 155
            + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T IRVID  
Sbjct: 99  AFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYKERRVINTPLETRIRVIDGV 156

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214
                GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E      N 
Sbjct: 157 LTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESLKKSVNA 216

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R++   +G
Sbjct: 217 AKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRDMKLAAG 276

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D +RSILDG
Sbjct: 277 EPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEIRSILDG 334

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HI L+R LA +G YP +D L SVSR+  +      +   + +  ++   EE +    +G 
Sbjct: 335 HIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEELQVFIDLGE 394

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
           YR G +   D A++  P + ++LKQS
Sbjct: 395 YRAGQNAENDFAMNARPKLTNWLKQS 420


>gi|300936197|ref|ZP_07151133.1| ATP synthase SpaL [Escherichia coli MS 21-1]
 gi|300458654|gb|EFK22147.1| ATP synthase SpaL [Escherichia coli MS 21-1]
          Length = 435

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 199/334 (59%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 87  QLTIHISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 144

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 145 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 204

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 205 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 265 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 323 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 382

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G ++  D A++  P + ++LKQS
Sbjct: 383 QVFIDLGEYRAGQNVENDFAMNARPKLTNWLKQS 416


>gi|62085070|gb|AAX62935.1| putative type III secretion apparatus protein [Escherichia coli]
          Length = 439

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 91  QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNL--RLIDELPPSYQERRVINTPLET 148

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 149 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 208

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 209 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 268

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 269 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 326

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 327 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 386

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G +   D A++  P + ++LKQS
Sbjct: 387 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420


>gi|331654355|ref|ZP_08355355.1| invasion protein InvC [Escherichia coli M718]
 gi|331047737|gb|EGI19814.1| invasion protein InvC [Escherichia coli M718]
          Length = 439

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 91  QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNL--RLIDELPPSYQERRVINTPLET 148

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 149 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 208

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 209 SLKQSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 268

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 269 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 326

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 327 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 386

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G +   D A++  P + ++LKQS
Sbjct: 387 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420


>gi|91791425|ref|YP_561076.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
 gi|91713427|gb|ABE53353.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
          Length = 436

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/333 (38%), Positives = 203/333 (60%), Gaps = 8/333 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +VI I+   V + P      IS GD +   G   R+   +   G V++A G+P+D +  
Sbjct: 54  AEVISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLD-EQE 112

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           LG        ++     + R  +++   T I+ +D F P+  GQR+G+ AGSG+GKSTLL
Sbjct: 113 LGVVQTQCVFLASHINPLTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTLL 172

Query: 179 SMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
           +M + S C  +   ++I LVGERGREV EF+   +   L+ ++V+V AT++E P+ R +A
Sbjct: 173 AMMSDS-CAQQNAVIVIVLVGERGREVEEFVNGKMFKRLRSRAVLVAATAEEMPVTRVLA 231

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
               + +AE  S++G  V+ ++DS+TR A + REI    GE P A+GY  SVFS L R++
Sbjct: 232 VKYGLALAESLSAEGKEVIFVVDSLTRVAMAQREIGLAIGEPPTAKGYTPSVFSLLQRIV 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G + + + +ITA+ SVLV+ D+ +DPI D++R++LDGHIVL+R+LAE+G +P +D L
Sbjct: 292 ERCG-AFRHRASITALFSVLVETDDFDDPIVDTLRAVLDGHIVLDRALAEQGHFPAIDVL 350

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            SVSRL    + A + KL  +   L+  +++ +
Sbjct: 351 RSVSRLTTNLFDAKKIKLSRAGRILLSEYKQKK 383


>gi|167840175|ref|ZP_02466859.1| ATP synthase SpaL [Burkholderia thailandensis MSMB43]
          Length = 310

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/297 (41%), Positives = 178/297 (59%), Gaps = 3/297 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQRIG+FA +G GK++L++M       D  ++
Sbjct: 5   PDYAARRPIERRLATGVRAIDGLLTCGVGQRIGIFAAAGCGKTSLMNMMIEHAAADVYVV 64

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 65  ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 124

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P   E G+ITA  
Sbjct: 125 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTEAGSITAFY 182

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 183 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSTSRLFDEIAHAPHRA 242

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                   + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+ D
Sbjct: 243 AAMQFRRHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAIDEASAFD 299


>gi|300896251|ref|ZP_07114798.1| ATP synthase SpaL [Escherichia coli MS 198-1]
 gi|300359872|gb|EFJ75742.1| ATP synthase SpaL [Escherichia coli MS 198-1]
          Length = 435

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 87  QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 144

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 145 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 204

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 205 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 265 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 323 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 382

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G +   D A++  P + ++LKQS
Sbjct: 383 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 416


>gi|218706366|ref|YP_002413885.1| ATP synthase SpaL [Escherichia coli UMN026]
 gi|218433463|emb|CAR14365.1| ATP synthase spaL (Invasion protein invC) [Escherichia coli UMN026]
          Length = 439

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 91  QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 148

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 149 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 208

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 209 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 268

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 269 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 326

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 327 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 386

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G +   D A++  P + ++LKQS
Sbjct: 387 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420


>gi|271500425|ref|YP_003333450.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya dadantii Ech586]
 gi|270343980|gb|ACZ76745.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya dadantii Ech586]
          Length = 460

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/397 (36%), Positives = 228/397 (57%), Gaps = 12/397 (3%)

Query: 45  LGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD  ++ +  +S  L +++  +    ++  +G  + I+ G +V   +    +  S    
Sbjct: 54  IGDLCLIERHDHSPVLAEIVGFSPKNTFLSALGALDGIAQGAVVTPLYQPHCVQVSEALF 113

Query: 103 GRVINALGKPID-GDDS--LGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           G V++  G+P++ G  S  +  G LS    M ++   PP   R R+     TG+R ID  
Sbjct: 114 GSVLDGFGRPLEHGSHSAFVEPGSLSASPPMPVIGDAPPPTERPRIASPLPTGLRAIDGL 173

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215
             +  GQR+G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L   L+
Sbjct: 174 LTIGCGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDAQLR 233

Query: 216 -KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            ++V+V +TSD S + R  A  TA  IAE F + G  VLLI+DS+TRFA + REI    G
Sbjct: 234 SRTVLVCSTSDRSSMERARAAFTATAIAEAFRATGKQVLLIIDSLTRFARAQREIGLALG 293

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E     G P SV++ LPRL+ER G  +  +G ITA+ SVL++ D+ NDP+AD VRS++DG
Sbjct: 294 EPQGRGGLPPSVYTLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDG 351

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+R LAE   YP +D L S+SR        +  +  +++  L+  +++   +  +G 
Sbjct: 352 HIVLSRRLAERNHYPAIDVLMSLSRTMSNVVDTEHTRNANAVRRLMAAYKQVEMLIRLGE 411

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           Y+PG D + D AV+    I  FL+Q+  +  S D  Q
Sbjct: 412 YQPGHDALTDAAVNANDDINRFLQQAMREPQSFDDIQ 448


>gi|301027452|ref|ZP_07190789.1| ATP synthase SpaL [Escherichia coli MS 69-1]
 gi|300394960|gb|EFJ78498.1| ATP synthase SpaL [Escherichia coli MS 69-1]
          Length = 435

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 87  QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 144

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 145 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 204

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 205 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 265 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 323 EIRSILDGHIYLSRKLAGQGHYPTIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 382

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G +   D A++  P + ++LKQS
Sbjct: 383 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 416


>gi|167577435|ref|ZP_02370309.1| ATP synthase SpaL [Burkholderia thailandensis TXDOH]
          Length = 310

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/295 (41%), Positives = 175/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 5   PDYAARRPIERRLATGVRAIDGLLTCGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 64

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 65  ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGRD 124

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 125 VMLFLDSMTRYARALRDLALAAGEAPARRGYPASVFEQLPRLLER--PGRTHAGSITAFY 182

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 183 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLNSASRLFDEIADAPHRS 242

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FLKQ   + S+
Sbjct: 243 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLKQEIDEASA 297


>gi|331664430|ref|ZP_08365336.1| invasion protein InvC [Escherichia coli TA143]
 gi|331058361|gb|EGI30342.1| invasion protein InvC [Escherichia coli TA143]
          Length = 430

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 197/332 (59%), Gaps = 5/332 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149
           +  I  S  + G V+NA G+ ++       GD  ++ ++ ++PP+   +RV     +T I
Sbjct: 82  QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           RVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E  
Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
               N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R+
Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D +
Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ + 
Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +G YR G +   D A++  P + ++LKQS
Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411


>gi|293416112|ref|ZP_06658752.1| ATP synthase in type III secretion protein SctN [Escherichia coli
           B185]
 gi|291432301|gb|EFF05283.1| ATP synthase in type III secretion protein SctN [Escherichia coli
           B185]
          Length = 430

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 197/332 (59%), Gaps = 5/332 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149
           +  I  S  + G V+NA G+ ++       GD  ++ ++ ++PP+   +RV     +T I
Sbjct: 82  QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           RVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E  
Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
               N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R+
Sbjct: 202 KQSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D +
Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ + 
Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +G YR G +   D A++  P + ++LKQS
Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411


>gi|307131226|ref|YP_003883242.1| type III secretory pathway, ATPase HrcN [Dickeya dadantii 3937]
 gi|306528755|gb|ADM98685.1| type III secretory pathway, ATPase component HrcN [Dickeya dadantii
           3937]
          Length = 460

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/403 (36%), Positives = 230/403 (57%), Gaps = 14/403 (3%)

Query: 45  LGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102
           +GD  +V +  +S  L +++  + +  ++  +G  + I+ G +V   +    +  S    
Sbjct: 55  IGDLCLVARDDSSQVLAEIVGFSPENTFLSALGALDGIAQGAVVTPLYQPHCVQVSDALF 114

Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           G V++  G+P+ DG  S  +  G L+   + ++   PP   R R+     TG+R ID   
Sbjct: 115 GSVLDGFGRPLEDGGHSAFVEPGSLNATPIPVIGDAPPPTERPRIADPLPTGMRAIDGLL 174

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
            +  GQR+GVFAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF++  L + L+ 
Sbjct: 175 TIGCGQRVGVFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEQLRS 234

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           ++V+V +TSD S + R  A  TA  IAE F + G  VLLI+DS+TRFA + REI    GE
Sbjct: 235 RTVLVCSTSDRSSMERARAAFTATAIAEAFRAAGKQVLLIIDSLTRFARAQREIGLALGE 294

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
                G P SV++ LPRL+ER G  +  +G ITA+ SVL++ D+ NDP+AD VRS++DGH
Sbjct: 295 PQGRGGLPPSVYTLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGH 352

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL+R LAE   YP +D L S+SR        D  +  +++  L+  +++   +  +G Y
Sbjct: 353 IVLSRRLAERNHYPAIDVLMSLSRTMSNVVERDHTRHANAVRRLMAAYKQVEMLIRLGEY 412

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +PG D   D AV     I  FL+Q+   +     F  I  +L+
Sbjct: 413 QPGHDAFTDAAVSANDDINRFLQQA---MREPQGFDHIQSQLE 452


>gi|293406357|ref|ZP_06650283.1| ATP synthase SpaL [Escherichia coli FVEC1412]
 gi|298382093|ref|ZP_06991690.1| ATP synthase SpaL [Escherichia coli FVEC1302]
 gi|291426363|gb|EFE99395.1| ATP synthase SpaL [Escherichia coli FVEC1412]
 gi|298277233|gb|EFI18749.1| ATP synthase SpaL [Escherichia coli FVEC1302]
          Length = 430

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 82  QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 139

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 140 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 199

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 200 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 259

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 260 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 318 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 377

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G +   D A++  P + ++LKQS
Sbjct: 378 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411


>gi|167743206|ref|ZP_02415980.1| ATP synthase SpaL [Burkholderia pseudomallei 14]
          Length = 306

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 1   PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 60

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 61  ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 120

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 121 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 178

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 179 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 238

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 239 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 293


>gi|197286521|ref|YP_002152393.1| ATP synthase SpaL [Proteus mirabilis HI4320]
 gi|227357595|ref|ZP_03841948.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
 gi|194684008|emb|CAR45299.1| type III secretion system protein [Proteus mirabilis HI4320]
 gi|227162305|gb|EEI47309.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
          Length = 432

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 4/290 (1%)

Query: 133 PPAM-NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PP   +R  +   FK+GIR ID       GQR+G+FA +G GK+ L++M  R    D  +
Sbjct: 126 PPLFSDRLPITTLFKSGIRAIDGLLSCGLGQRMGIFASAGTGKTMLMNMIIRFAQADVFV 185

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I L+GERGREV EFIE+       + +V++ +TS++S + R  A L A T+AEYF  +G 
Sbjct: 186 IGLIGERGREVTEFIEELKQHKRCENTVLICSTSEQSAVERCNAALVATTVAEYFRQQGK 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NV+L +DS+TR+  ++R+IA  +GELPV +GYP SVF +LP +LER  P   + G+ITA 
Sbjct: 246 NVVLFIDSMTRYCRALRDIALTAGELPVRKGYPASVFDKLPAILER--PGVTKTGSITAF 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL++ D+  D I + +RSILDGHI L+R +A  G YP +D L SVSR+  +   + ++
Sbjct: 304 YTVLLESDDEPDAIGEEIRSILDGHIYLSRKIAASGHYPAIDVLGSVSRVFQQVTDSKQQ 363

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           K    +  ++ R ++ + ++ +G Y  G + + D AV +   I  FL QS
Sbjct: 364 KSALKIRQILMRLQDVKLLQELGEYHEGDNELNDIAVRKQAKIESFLTQS 413


>gi|254301453|ref|ZP_04968897.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 406e]
 gi|157811378|gb|EDO88548.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 406e]
          Length = 381

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 76  PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 135

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 136 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 195

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 196 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 253

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 254 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 313

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 314 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 368


>gi|83717980|ref|YP_439029.1| ATP synthase SpaL [Burkholderia thailandensis E264]
 gi|167615585|ref|ZP_02384220.1| ATP synthase SpaL [Burkholderia thailandensis Bt4]
 gi|257142137|ref|ZP_05590399.1| ATP synthase SpaL [Burkholderia thailandensis E264]
 gi|83651805|gb|ABC35869.1| type III secretion system protein BsaS [Burkholderia thailandensis
           E264]
          Length = 436

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/346 (38%), Positives = 192/346 (55%), Gaps = 7/346 (2%)

Query: 86  LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK----GDLSMEIMSKVPPAMNRQRV 141
           LV    R  I  S    G V++A G  ++   + G           I +  P    R+ +
Sbjct: 80  LVPTGERMTIDVSPALLGAVVDAAGGVVETLGTAGALRGAAPRRSAIDAAPPDYAARRPI 139

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           E+   TG+R ID       GQR G+FA +G GK++L++M       D  +++L+GERGRE
Sbjct: 140 ERRLATGVRAIDGLLTCGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGERGRE 199

Query: 202 VREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V EF+E       + ++VVV ATSD + + R  A L A TIAEYF   G +V+L LDS+T
Sbjct: 200 VSEFVERMRRSGSRDRTVVVYATSDRASVDRCNAALVATTIAEYFRDLGCDVMLFLDSMT 259

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  +VL++ +  
Sbjct: 260 RYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTHAGSITAFYTVLLENEEE 317

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + L       +
Sbjct: 318 PDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLKSASRLFDEIADAPHRSLAKRFRQHL 377

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            R +E +    +G YR G +   D A+ + P +  FLKQ   + S+
Sbjct: 378 ARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLKQEIDEASA 423


>gi|167898814|ref|ZP_02486215.1| ATP synthase SpaL [Burkholderia pseudomallei 7894]
 gi|167908518|ref|ZP_02495723.1| ATP synthase SpaL [Burkholderia pseudomallei NCTC 13177]
          Length = 307

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 2   PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 61

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 62  ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 121

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 122 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 179

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 180 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 239

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 240 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 294


>gi|293412216|ref|ZP_06654939.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468987|gb|EFF11478.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 430

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 197/332 (59%), Gaps = 5/332 (1%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149
           +  I  S  + G V+NA G+ ++       GD  ++ ++ ++PP+   +RV     +T I
Sbjct: 82  QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           RVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E  
Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201

Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
               N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R+
Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D +
Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ + 
Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +G YR G +   D A++  P + ++LKQS
Sbjct: 380 FIDLGEYRAGQNSENDFAMNARPKLTNWLKQS 411


>gi|226195959|ref|ZP_03791545.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei Pakistan 9]
 gi|225931852|gb|EEH27853.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei Pakistan 9]
          Length = 436

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 177/295 (60%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 131 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 190

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 191 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P   + G+ITA  
Sbjct: 251 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTKAGSITAFY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 309 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 369 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 423


>gi|254575128|gb|ACT68029.1| type III secretion protein [Pantoea stewartii subsp. stewartii
           DC283]
          Length = 431

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/378 (35%), Positives = 204/378 (53%), Gaps = 22/378 (5%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK------ 111
             QVI  N +   +  +   +  S  +++   G+ FRI       G +I+A G       
Sbjct: 47  FAQVIGFNKEHTLLSLLNDNQGFSRSNVLLPTGKPFRIEVHENIAGAIIDATGTIRGRLD 106

Query: 112 -----PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
                P+ G  SL       +   + P       +     TG+R ID       GQR+G+
Sbjct: 107 EAVQPPLTGGVSLDASGAPRDFTQRTP-------IADALATGVRTIDGLLTCGQGQRMGI 159

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSD 225
           FA +G GK++L+SM       D  +I L+GERGREV EF+E+    + +  +++V ATSD
Sbjct: 160 FAAAGCGKTSLMSMIIEHSEADIYVIGLIGERGREVTEFVEELKHSSRRLQIILVYATSD 219

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
            S + R  A   A TIAE+FS +G NVLL +DSITR+A ++R++A + GELP  RGYP S
Sbjct: 220 RSCVERCNAAQIATTIAEFFSEQGKNVLLFMDSITRYARALRDVALSMGELPARRGYPAS 279

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF  LP+LLER  P    +G+ITA  +VL++ +  +D I D VRSILDGHI L++ LA +
Sbjct: 280 VFEALPKLLER--PGRFLRGSITAFYTVLIENEEESDVIGDEVRSILDGHIYLSKKLAAK 337

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G YP +D + S+SR+  +  S D + L +     + R ++ +    +G YR G +   D 
Sbjct: 338 GHYPAIDVMQSISRVFTQVTSEDHQVLATRFRKFLVRQKDMQLYLDLGEYRRGENTDNDA 397

Query: 406 AVHQVPIIYDFLKQSPSD 423
           A  +   +  FL+Q  S+
Sbjct: 398 AFDRKDQMEAFLQQRMSE 415


>gi|268592379|ref|ZP_06126600.1| invasion protein InvC [Providencia rettgeri DSM 1131]
 gi|291312165|gb|EFE52618.1| invasion protein InvC [Providencia rettgeri DSM 1131]
          Length = 430

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 196/334 (58%), Gaps = 8/334 (2%)

Query: 101 WCGRVINALGKPIDG--DDSLGKGDLSMEIMS-KVPPAMNRQR--VEKGFKTGIRVIDIF 155
             G++ NA G+ +    +D      L+ +++    PP    QR  V +   TG+R ID  
Sbjct: 88  LAGKIFNAAGEQVGALSEDLTEPMLLNTKLLRIDSPPVSVTQRRPVSEPMVTGVRAIDSL 147

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNL 214
                GQRIG+FA +G GK++L++M       D  +++L+GERGREV EFIE+     + 
Sbjct: 148 LTCGLGQRIGIFAAAGSGKTSLMNMIINHAHADIHVVALIGERGREVIEFIEELKESPHA 207

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            +++++ ATSD  PI R  A L A TIAEYF   G NVLL +DS+TR+A ++R++A  +G
Sbjct: 208 AQTILIYATSDSPPIERCNAALLATTIAEYFRDCGRNVLLYVDSMTRYARALRDVALATG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ELP  RGYP SVF +LP LLER  P + + G+ITA  +VL++ +   DPI D +RSILDG
Sbjct: 268 ELPARRGYPASVFEQLPMLLER--PGQLKHGSITAFYTVLLESEEEADPIGDEIRSILDG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HI L+  LA  G YP +D L S+SR+  K  + + ++    L  +I R E+ +    +G 
Sbjct: 326 HIYLSHKLAGRGHYPAIDILHSISRVFQKVTTPEHRRCAIDLRDMISRLEQIQLYLELGE 385

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           Y+ G     D+A+ +   I  FLKQ+  +  S D
Sbjct: 386 YQRGESHENDRALDKKEQIEAFLKQAMDEPMSFD 419


>gi|225863608|ref|YP_002748986.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB102]
 gi|225786032|gb|ACO26249.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB102]
          Length = 434

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 217/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P G  E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFGQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S++  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|167828752|ref|ZP_02460223.1| ATP synthase SpaL [Burkholderia pseudomallei 9]
          Length = 302

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/290 (41%), Positives = 176/290 (60%), Gaps = 3/290 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  +++L+GE
Sbjct: 2   RRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGE 61

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +V+L L
Sbjct: 62  RGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCDVMLFL 121

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P   + G+ITA  +VL++
Sbjct: 122 DSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTKAGSITAFYTVLLE 179

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + L    
Sbjct: 180 NEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRALAKRF 239

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 240 RQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 289


>gi|167923342|ref|ZP_02510433.1| ATP synthase SpaL [Burkholderia pseudomallei BCC215]
          Length = 319

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 14  PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 73

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 74  ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 133

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 134 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 191

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 192 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 251

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 252 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 306


>gi|229132562|ref|ZP_04261411.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST196]
 gi|228650908|gb|EEL06894.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST196]
          Length = 429

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/380 (38%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P G  E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFGQTEKVCYGDAVTLIEEDVVVPRGNHLLGKVLSANGEVLNENT 110

Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
                ++ ++ I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GK
Sbjct: 111 E----NIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  +KKSVVVVATSDES +++  
Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLR 226

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  
Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEA 403

Query: 413 IYDFLKQSPSD-LSSEDVFQ 431
           I  FLKQ  +D    EDV Q
Sbjct: 404 INTFLKQGRTDSFQFEDVVQ 423


>gi|53716453|ref|YP_106129.1| ATP synthase SpaL [Burkholderia mallei ATCC 23344]
 gi|67639408|ref|ZP_00438268.1| type III secretion system protein BsaS [Burkholderia mallei GB8
           horse 4]
 gi|124381359|ref|YP_001025860.1| ATP synthase SpaL [Burkholderia mallei NCTC 10229]
 gi|126447058|ref|YP_001077945.1| ATP synthase SpaL [Burkholderia mallei NCTC 10247]
 gi|167004379|ref|ZP_02270137.1| type III secretion system protein BsaS [Burkholderia mallei PRL-20]
 gi|254176334|ref|ZP_04882992.1| type III secretion system protein BsaS [Burkholderia mallei ATCC
           10399]
 gi|254200996|ref|ZP_04907361.1| type III secretion system protein BsaS [Burkholderia mallei FMH]
 gi|254204959|ref|ZP_04911312.1| type III secretion system protein BsaS [Burkholderia mallei JHU]
 gi|254359078|ref|ZP_04975350.1| type III secretion system protein BsaS [Burkholderia mallei
           2002721280]
 gi|52422423|gb|AAU45993.1| type III secretion system protein BsaS [Burkholderia mallei ATCC
           23344]
 gi|126239912|gb|ABO03024.1| type III secretion system protein BsaS [Burkholderia mallei NCTC
           10247]
 gi|147748608|gb|EDK55683.1| type III secretion system protein BsaS [Burkholderia mallei FMH]
 gi|147754545|gb|EDK61609.1| type III secretion system protein BsaS [Burkholderia mallei JHU]
 gi|148028265|gb|EDK86225.1| type III secretion system protein BsaS [Burkholderia mallei
           2002721280]
 gi|160697376|gb|EDP87346.1| type III secretion system protein BsaS [Burkholderia mallei ATCC
           10399]
 gi|238519945|gb|EEP83410.1| type III secretion system protein BsaS [Burkholderia mallei GB8
           horse 4]
 gi|243060295|gb|EES42481.1| type III secretion system protein BsaS [Burkholderia mallei PRL-20]
 gi|261826278|gb|ABM99622.2| type III secretion system protein BsaS [Burkholderia mallei NCTC
           10229]
          Length = 436

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 131 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 190

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 191 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 251 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 309 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 369 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 423


>gi|53722562|ref|YP_111547.1| ATP synthase SpaL [Burkholderia pseudomallei K96243]
 gi|76818421|ref|YP_335741.1| ATP synthase SpaL [Burkholderia pseudomallei 1710b]
 gi|126444845|ref|YP_001063165.1| ATP synthase SpaL [Burkholderia pseudomallei 668]
 gi|134282099|ref|ZP_01768805.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 305]
 gi|237507445|ref|ZP_04520160.1| flagellum-specific ATP synthase [Burkholderia pseudomallei MSHR346]
 gi|254185164|ref|ZP_04891753.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 1655]
 gi|254265077|ref|ZP_04955942.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 1710a]
 gi|52212976|emb|CAH39014.1| surface presentation of antigens protein [Burkholderia pseudomallei
           K96243]
 gi|76582894|gb|ABA52368.1| surface presentation of antigens protein [Burkholderia pseudomallei
           1710b]
 gi|126224336|gb|ABN87841.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 668]
 gi|134246628|gb|EBA46716.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 305]
 gi|184215756|gb|EDU12737.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 1655]
 gi|234999650|gb|EEP49074.1| flagellum-specific ATP synthase [Burkholderia pseudomallei MSHR346]
 gi|254216079|gb|EET05464.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 1710a]
          Length = 435

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 130 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 189

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 190 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 249

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 250 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 307

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 308 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 367

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 368 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 422


>gi|229166590|ref|ZP_04294342.1| Flagellum-specific ATP synthase [Bacillus cereus AH621]
 gi|228616844|gb|EEK73917.1| Flagellum-specific ATP synthase [Bacillus cereus AH621]
          Length = 429

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/380 (38%), Positives = 222/380 (58%), Gaps = 14/380 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P G  E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFGQTEKVCYGDAVTLIEEDVVVPRGNHLLGKVLSANGEVLNENT 110

Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
                ++ ++ I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GK
Sbjct: 111 E----NIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  +KKSVVVVATSDES +++  
Sbjct: 167 STLLGMVAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLR 226

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  
Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEA 403

Query: 413 IYDFLKQSPSD-LSSEDVFQ 431
           I  FLKQ  +D    EDV Q
Sbjct: 404 INTFLKQGRTDSFQFEDVVQ 423


>gi|167820382|ref|ZP_02452062.1| ATP synthase SpaL [Burkholderia pseudomallei 91]
          Length = 301

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 120/290 (41%), Positives = 175/290 (60%), Gaps = 3/290 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  +++L+GE
Sbjct: 1   RRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGE 60

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +V+L L
Sbjct: 61  RGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCDVMLFL 120

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  +VL++
Sbjct: 121 DSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFYTVLLE 178

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + L    
Sbjct: 179 NEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRALAKRF 238

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 239 RQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 288


>gi|167915496|ref|ZP_02502587.1| ATP synthase SpaL [Burkholderia pseudomallei 112]
          Length = 311

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 6   PDYAARRPIERRLATGVRAIDGLLVCGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 65

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 66  ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 125

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 126 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 183

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 184 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 243

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 244 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 298


>gi|167850208|ref|ZP_02475716.1| ATP synthase SpaL [Burkholderia pseudomallei B7210]
          Length = 311

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 6   PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 65

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 66  ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 125

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 126 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRVGSITAFY 183

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 184 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 243

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 244 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 298


>gi|167573312|ref|ZP_02366186.1| ATP synthase SpaL [Burkholderia oklahomensis C6786]
          Length = 436

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 8/375 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--GD 116
            QV+    D   +  +G    +S   ++   G R  I  S    G V++A G  ++  G 
Sbjct: 53  AQVVGFARDTAILSTLGSTAGLSRQVVLVPTGERMTIDVSPAMLGAVVDATGGIVETFGA 112

Query: 117 DSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   S  M I +  P    R+ +++   TG+R ID       GQR G+FA +G GK
Sbjct: 113 SQPARDAASRRMAIDAAPPDYAARRSIDRRLATGVRAIDGLLTCGVGQRFGIFAAAGCGK 172

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
           ++L++M       D  +++L+GERGREV EF+E       + +++VV ATSD S + R  
Sbjct: 173 TSLMNMMIEHAAADVYVVALIGERGREVSEFVERLRRSGSRDRTIVVYATSDRSSVDRCN 232

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A L A TIAEYF   G +V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRL
Sbjct: 233 AALVATTIAEYFRDLGCDVMLFLDSMTRYARALRDLALTTGEAPARRGYPASVFEQLPRL 292

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER  P   + G+ITA  +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D 
Sbjct: 293 LER--PGRTDAGSITAFYTVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDV 350

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S SRL D+   A  + L       + R +E +    +G YR G +   D A+ +   +
Sbjct: 351 LRSASRLFDEIAGAPHRALARRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRSAL 410

Query: 414 YDFLKQSPSDLSSED 428
             FL+Q   + S+ D
Sbjct: 411 DAFLQQEVDEASAFD 425


>gi|75906102|gb|ABA29443.1| putative type III secretion system ATP synthase [Candidatus
           Hamiltonella defensa]
          Length = 361

 Score =  223 bits (567), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/306 (40%), Positives = 184/306 (60%), Gaps = 4/306 (1%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I S  P  ++R  +   F TG++ ID       GQR+G+FA +G GK++L+ M       
Sbjct: 55  IDSPPPSYLHRLSIRDPFITGVKAIDGLITCGVGQRMGIFAAAGCGKTSLMHMLIEQADA 114

Query: 188 DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I LVGERGREV EF E        +K +VV ATSD S + R  A L A TIAEYF 
Sbjct: 115 DVFVIGLVGERGREVTEFTEVLSKSGRAQKCIVVYATSDFSSLDRCNAALLATTIAEYFR 174

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  V+L LDSITR+A ++R++A  +GE P  RGYP SVF  LP +LER  PS  + G+
Sbjct: 175 DQGKKVVLFLDSITRYARALRDVALAAGEAPARRGYPASVFDSLPSILER--PSNTKNGS 232

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  ++L++ D+  DPI++ +RSILDGHI L++ LA +  YP +D L S+SR++ +   
Sbjct: 233 ITAFYTILLESDDEPDPISEEIRSILDGHIYLSKKLAIKNHYPAIDVLHSISRVSSQICD 292

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +     +++ + +E +    +G YR G +   D+A+ + P +  +L+QS ++ SS
Sbjct: 293 TNHLSMAGEFRNILAKIQELQMFVELGEYRQGENAENDRAIKKRPALLKWLQQSMNEHSS 352

Query: 427 -EDVFQ 431
            E  FQ
Sbjct: 353 FEQTFQ 358


>gi|315301972|ref|ZP_07872966.1| flagellar protein export ATPase FliI [Listeria ivanovii FSL F6-596]
 gi|313629659|gb|EFR97798.1| flagellar protein export ATPase FliI [Listeria ivanovii FSL F6-596]
          Length = 433

 Score =  223 bits (567), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 159/428 (37%), Positives = 235/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+       I       G+V+NA G+ ++ +    K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTNITIPADEFLLGKVLNASGEILNEEAGTAKYKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A NR  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  I
Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  E+G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--EQGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L+SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRDLATKNHYPAIDVLSSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K+ S +   I  + E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KMASKIREWISIYLENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T +L
Sbjct: 421 TLEETNQL 428


>gi|186976186|gb|ACD01068.1| EivC [Escherichia coli O157:H7 str. EC10]
          Length = 430

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 197/334 (58%), Gaps = 9/334 (2%)

Query: 92  RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147
           +  I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T
Sbjct: 82  QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 139

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
            IRVID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E
Sbjct: 140 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 199

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++
Sbjct: 200 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 259

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++   +GE P  RGYP SVF  LPRLLER GP+   KG+ITA  +VL++G++ +DP+ D
Sbjct: 260 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSILDGHI L+R LA +G YP +D L SVSR+  +      +   + +  ++   E+ 
Sbjct: 318 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 377

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +G YR G +   D  ++  P + ++LKQS
Sbjct: 378 QVFIDLGEYRAGQNAENDFVMNARPKLTNWLKQS 411


>gi|126457578|ref|YP_001076116.1| ATP synthase SpaL [Burkholderia pseudomallei 1106a]
 gi|242312080|ref|ZP_04811097.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 1106b]
 gi|254193811|ref|ZP_04900243.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei S13]
 gi|126231346|gb|ABN94759.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 1106a]
 gi|169650562|gb|EDS83255.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei S13]
 gi|242135319|gb|EES21722.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 1106b]
          Length = 435

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 130 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 189

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 190 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 249

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 250 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRVGSITAFY 307

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + 
Sbjct: 308 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 367

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 368 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 422


>gi|167566202|ref|ZP_02359118.1| ATP synthase SpaL [Burkholderia oklahomensis EO147]
          Length = 436

 Score =  222 bits (566), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 8/375 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--GD 116
            QV+    D   +  +G    +S   ++   G R  I  S    G V++A G  ++  G 
Sbjct: 53  AQVVGFARDTAILSTLGSTAGLSRQVVLVPTGERMTIDVSPAMLGAVVDATGGIVETFGA 112

Query: 117 DSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   S  M I +  P    R+ +++   TG+R ID       GQR G+FA +G GK
Sbjct: 113 SQPARDAASRRMAIDAAPPDYAARRSIDRRLATGVRAIDGLLTCGVGQRFGIFAAAGCGK 172

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
           ++L++M       D  +++L+GERGREV EF+E       + +++VV ATSD S + R  
Sbjct: 173 TSLMNMMIEHAAADVYVVALIGERGREVSEFVERLRRSGSRDRTIVVYATSDRSSVDRCN 232

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A L A TIAEYF   G +V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRL
Sbjct: 233 AALVATTIAEYFRDLGCDVMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRL 292

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER  P   + G+ITA  +VL++ +   DPI D +RSI+DGH+ L+R L  +G +P +D 
Sbjct: 293 LER--PGRTDAGSITAFYTVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDV 350

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S SRL D+   A  + L       + R +E +    +G YR G +   D A+ +   +
Sbjct: 351 LRSASRLFDEIAGAPHRALARRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRSAL 410

Query: 414 YDFLKQSPSDLSSED 428
             FL+Q   + S+ D
Sbjct: 411 DAFLQQEVDEASAFD 425


>gi|261344595|ref|ZP_05972239.1| invasion protein InvC [Providencia rustigianii DSM 4541]
 gi|282567509|gb|EFB73044.1| invasion protein InvC [Providencia rustigianii DSM 4541]
          Length = 430

 Score =  222 bits (565), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 199/333 (59%), Gaps = 8/333 (2%)

Query: 102 CGRVINALGKPI----DGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFT 156
            GR+ NA G+ +    D +  + +    ++ +   P ++ ++R V +   TGIR ID   
Sbjct: 89  AGRIFNAAGEQVGSLVDENIEISQLKNRLQRIDNPPISVTKRRPVSEPLVTGIRAIDGLL 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLK 215
               GQR+G+FA +G GK++L++M       D  I++L+GERGREV EFIE+     +  
Sbjct: 149 TCGLGQRLGIFASAGSGKTSLMNMLINHAHGDIHIVALIGERGREVIEFIEELKTSPHAD 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K+++V ATSD  PI R  A L A  +AEYF   G +VLL +DS+TR+A ++R++A ++GE
Sbjct: 209 KTILVYATSDSPPIERCNAALLATAMAEYFRDLGRHVLLYVDSMTRYARALRDVALSTGE 268

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP  RGYP+SVF +LP LLER  P   ++G ITA  +VL++ ++ +DPI D +RSILDGH
Sbjct: 269 LPARRGYPSSVFEQLPLLLER--PGRIKEGAITAFYTVLLESEDESDPIGDEIRSILDGH 326

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  LA  G YP +D L S+SR+  K  + + ++    +   + R E+ +    +G Y
Sbjct: 327 IYLSHKLAGRGHYPAIDILHSISRVFQKVTTPEHRQWAVDVRDNLARLEQIQLYLELGEY 386

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           + G     D+A+ + P I  FL+Q   D  S +
Sbjct: 387 QRGESAENDRALDKQPEITRFLQQPMDDFVSAE 419


>gi|507390|gb|AAA81942.1| HrpJ4 [Pseudomonas syringae]
 gi|148562535|gb|ABQ88354.1| HrcN [Pseudomonas syringae pv. syringae]
          Length = 449

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/431 (36%), Positives = 232/431 (53%), Gaps = 33/431 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRRIL--LECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDG-------------DDSLGKGDLSMEI 128
           +G  +   G   RI       G V++  G+P+ G              DS G        
Sbjct: 84  VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGRLPRRVRRPRRPPHDSAGD------- 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P A        G  TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D
Sbjct: 137 -RRRPAADPATAHHPGLATGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCD 195

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            ++  L+GERGRE+REF++  L + L++ SV+V ATSD S + R  A  TA  IAE F +
Sbjct: 196 VIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRA 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGN 306
           +G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G+
Sbjct: 256 RGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GS 312

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+      
Sbjct: 313 ITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTG 372

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL  
Sbjct: 373 RKHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLRE 429

Query: 427 EDVFQEITKKL 437
               QE   +L
Sbjct: 430 PVPLQETLDRL 440


>gi|238898592|ref|YP_002924273.1| type III ATP synthase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466351|gb|ACQ68125.1| type III ATP synthase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 431

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 186/313 (59%), Gaps = 4/313 (1%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I S  P  ++R  +   F TG++ ID       GQR+G+FA +G GK++L+ M       
Sbjct: 121 IDSPPPSYLHRLSIRDPFITGVKAIDGLITCGVGQRMGIFAAAGCGKTSLMHMLIEQADA 180

Query: 188 DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I LVGERGREV EF E        +K +VV ATSD S + R  A L A TIAEYF 
Sbjct: 181 DVFVIGLVGERGREVTEFTEVLSKSGRAQKCIVVYATSDFSSLDRCNAALLATTIAEYFR 240

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  V+L LDSITR+A ++R++A  +GE P  RGYP SVF  LP +LER  PS  + G+
Sbjct: 241 DQGKKVVLFLDSITRYARALRDVALAAGEAPARRGYPASVFDSLPSILER--PSNTKNGS 298

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  ++L++ D+  DPI++ +RSILDGHI L++ LA +  YP +D L S+SR++ +   
Sbjct: 299 ITAFYTILLESDDEPDPISEEIRSILDGHIYLSKKLAIKNHYPAIDVLHSISRVSSQICD 358

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +     +++ + +E +    +G YR G +   D+A+ + P +  +L+QS ++ SS
Sbjct: 359 TNHLSMAGEFRNILAKIQELQMFVELGEYRQGENAENDRAIKKRPALLKWLQQSMNEHSS 418

Query: 427 -EDVFQEITKKLQ 438
            E   Q + +  Q
Sbjct: 419 FEQTLQAMNELTQ 431


>gi|16802758|ref|NP_464243.1| flagellum-specific ATP synthase [Listeria monocytogenes EGD-e]
 gi|224501979|ref|ZP_03670286.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL R2-561]
 gi|255025684|ref|ZP_05297670.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL J2-003]
 gi|255028429|ref|ZP_05300380.1| flagellum-specific ATP synthase [Listeria monocytogenes LO28]
 gi|16410105|emb|CAC98794.1| lmo0716 [Listeria monocytogenes EGD-e]
          Length = 433

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 234/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++    ++ 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|254830293|ref|ZP_05234948.1| flagellum-specific ATP synthase [Listeria monocytogenes 10403S]
 gi|24266813|gb|AAN52355.1| FliI [Listeria monocytogenes]
          Length = 433

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 234/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++    ++ 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|163939555|ref|YP_001644439.1| flagellum-specific ATP synthase [Bacillus weihenstephanensis KBAB4]
 gi|163861752|gb|ABY42811.1| ATPase, FliI/YscN family [Bacillus weihenstephanensis KBAB4]
          Length = 434

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/379 (38%), Positives = 220/379 (58%), Gaps = 12/379 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GDLV       + P      G+V++A GK ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDLVTLITEDVVVPRGNHLLGKVLSANGKVLNED- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  +KKSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R +A    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKREIATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  ++ + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPNHWQVANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD-LSSEDVFQ 431
             FLKQ  +D    ED+ Q
Sbjct: 410 NTFLKQGRTDSFHFEDIVQ 428


>gi|313634350|gb|EFS00948.1| flagellar protein export ATPase FliI [Listeria seeligeri FSL
           N1-067]
          Length = 433

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 236/428 (55%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G+ ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGEILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A NR  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  I
Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KLGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++    ++ 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E+V
Sbjct: 365 KNASKIREWMSIYQENELYFKLGTIEQTNDNASIFTSKEKSYFIHQFLKQ----LRDENV 420

Query: 430 FQEITKKL 437
             E T +L
Sbjct: 421 SLEETNQL 428


>gi|38619365|gb|AAR25633.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas sp. KD]
          Length = 405

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/399 (37%), Positives = 227/399 (56%), Gaps = 16/399 (4%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLD 68
           Q A   S + V   G +S+++ +   + C      +GD   V +   S  L +++     
Sbjct: 13  QRARLTSCSAVRISGKVSAVSGIL--LECQVPAAKIGDLCEVSKADGSSMLAEIVGFTDQ 70

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL--- 124
              +  +G    I +G  +   G   RI       G V++  G+P+ GD      D+   
Sbjct: 71  CTLLSALGTPAGIQVGARIQPLGIAHRIGVDDQLLGSVLDGFGRPLLGDGLGAFADVHDC 130

Query: 125 --SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             +  +++   P M + R+     TGIR ID    L  GQR+G+FAG+G GK+TLL+  A
Sbjct: 131 RSTTAVIADALPPMQKPRISNPLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLLAEMA 190

Query: 183 RS-DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           R+ DC D ++  L+GERGRE+REF++  L D L+ +SV++ ATSD S + R  A  TA  
Sbjct: 191 RNMDC-DVIVFGLIGERGRELREFLDHELDDELRQRSVLICATSDRSSMERARAAFTATA 249

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGP 299
           IAE +  +G  VLL++DS+TRFA + REI   +GE P+ RG  P SV++ LP+L+ER G 
Sbjct: 250 IAEAYRQRGMKVLLLIDSLTRFARAQREIGIAAGE-PIGRGGLPPSVYTLLPQLVERAGM 308

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           SE   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR
Sbjct: 309 SEN--GSITAIYTVLIEADSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +     S +  +  + L  L+  +++   +  +G Y+ G
Sbjct: 367 ILGNVTSREHVQANNRLRQLMAAYKQVEMLLRLGEYQXG 405


>gi|1146265|gb|AAB04681.1| flagellar export protein [Borrelia burgdorferi]
          Length = 436

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/342 (39%), Positives = 203/342 (59%), Gaps = 6/342 (1%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I +G+ V+   +   I+ S    GRVI++LG+PID   S         I  K+ P +NR 
Sbjct: 78  IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFFNNSYKELIFQKINP-INRS 136

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISLVGER 198
             E    TG++V+D F P+    +  VF   G+G S L L M A++   D  +I+ +GER
Sbjct: 137 IFEDQILTGVKVLDGFLPVAKRTKELVFFWFGVGNSYLCLGMIAKNSNADVNVIAFIGER 196

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GRE+ EFIE  LG+  LKKSV+VV+TSDESPI R      A  IAEYF  +G +VL   D
Sbjct: 197 GRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVLC-FD 255

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           SIT FA++ +   +     PVA+GYP SVF E+P LLER G +    G++T   +VLV+G
Sbjct: 256 SITWFANAKKRDVSFFRGAPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEG 314

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+  +P+ D+++++LDGHI+L+R L + G YP ++ L+S SR   +  S +++KL+    
Sbjct: 315 DDFTEPVDDNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKAR 374

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +L+  +++  D+   G Y  G +  +D A+ + P I +F+ Q
Sbjct: 375 NLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416


>gi|238755996|ref|ZP_04617321.1| ATP synthase spaL [Yersinia ruckeri ATCC 29473]
 gi|238705785|gb|EEP98177.1| ATP synthase spaL [Yersinia ruckeri ATCC 29473]
          Length = 431

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 184/309 (59%), Gaps = 9/309 (2%)

Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF-ARSDCFDKV 190
           PP M  R  +   F TGIR +D       GQR G+FA +G GK++L++M  A SD  D  
Sbjct: 125 PPEMTLRHPINSQFSTGIRAVDGLLTCGKGQRFGIFASAGAGKTSLMNMIIAHSDA-DVC 183

Query: 191 IISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I++LVGERGREV EFI +      + S ++V ATSD   I R  A L A  +AEYF   G
Sbjct: 184 IVALVGERGREVTEFIHELSSSPRRDSTILVYATSDSPSIERCNAALLATAMAEYFRDLG 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            NV+L +DS+TR+A ++R++A  +GELP  RGYP SVF  LP LLER  P   + G+ITA
Sbjct: 244 RNVVLFVDSMTRYARALRDVALAAGELPARRGYPASVFERLPSLLER--PGNMQNGSITA 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL++ ++  DPI D +RSILDGHI L+  LA  G YP +D L+S+SR+  +  +   
Sbjct: 302 FYTVLLESEDEPDPIGDEIRSILDGHIYLSYKLAGRGHYPAIDILSSISRVFPQITTDSH 361

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           +K  + +  ++ R +E +    +G Y+ G +   D+A+ +   I  FL+QS   ++    
Sbjct: 362 RKSAAEMRDMLARLDEIQLYLDLGEYQRGENPANDRALDRKSEIEAFLRQS---MAMNSP 418

Query: 430 FQEITKKLQ 438
           F+E  K L 
Sbjct: 419 FEETQKALN 427


>gi|313639033|gb|EFS04024.1| flagellar protein export ATPase FliI [Listeria seeligeri FSL
           S4-171]
          Length = 433

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 236/428 (55%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G+ ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGEILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A NR  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  I
Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KLGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++    ++ 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E+V
Sbjct: 365 KNASKVREWMSIYQENELYFKLGTIEQTNDNASIFTSKEKSYFIHQFLKQ----LRDENV 420

Query: 430 FQEITKKL 437
             E T +L
Sbjct: 421 SLEETNQL 428


>gi|73532532|dbj|BAE19824.1| flagellum-specific ATP synthase [Edwardsiella tarda]
          Length = 264

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/264 (45%), Positives = 168/264 (63%), Gaps = 8/264 (3%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
              GRV++   +P+DG    D    G LS +  +     + R  + +    G+R I+   
Sbjct: 1   SLSGRVLDGSARPLDGLQPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALL 56

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG+   +
Sbjct: 57  TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGRQ 116

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE
Sbjct: 117 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 176

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP  VF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 177 PPATKGYPPYVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 236

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR 359
           +VL+R LAE G YP +D  AS+SR
Sbjct: 237 VVLSRRLAEAGHYPAIDIEASISR 260


>gi|168747664|ref|ZP_02772686.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753796|ref|ZP_02778803.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759986|ref|ZP_02784993.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766851|ref|ZP_02791858.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168775735|ref|ZP_02800742.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168778872|ref|ZP_02803879.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785704|ref|ZP_02810711.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC869]
 gi|168799991|ref|ZP_02824998.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC508]
 gi|195936476|ref|ZP_03081858.1| ATP synthase SpaL [Escherichia coli O157:H7 str. EC4024]
 gi|208805681|ref|ZP_03248018.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813596|ref|ZP_03254925.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819267|ref|ZP_03259587.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396176|ref|YP_002272334.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327024|ref|ZP_03443107.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           TW14588]
 gi|261226171|ref|ZP_05940452.1| ATP synthase SpaL [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256575|ref|ZP_05949108.1| ATP synthase SpaL [Escherichia coli O157:H7 str. FRIK966]
 gi|187768770|gb|EDU32614.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017952|gb|EDU56074.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189003294|gb|EDU72280.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358515|gb|EDU76934.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363631|gb|EDU82050.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369249|gb|EDU87665.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374024|gb|EDU92440.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC869]
 gi|189377662|gb|EDU96078.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC508]
 gi|208725482|gb|EDZ75083.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734873|gb|EDZ83560.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739390|gb|EDZ87072.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157576|gb|ACI35009.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217319391|gb|EEC27816.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           TW14588]
 gi|320189204|gb|EFW63863.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. EC1212]
 gi|326339055|gb|EGD62870.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. 1044]
 gi|326343062|gb|EGD66830.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. 1125]
          Length = 430

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 194/329 (58%), Gaps = 5/329 (1%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGIRVI 152
           I  S  + G V+NA G+ ++       GD  ++ ++ ++PP+   +RV     +T IRVI
Sbjct: 85  IQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRIRVI 144

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           D       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E     
Sbjct: 145 DGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESLKKS 204

Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
            N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R++  
Sbjct: 205 VNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRDMKL 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
            +GE P  RGYP SVF  LPRLLER GP+   KG+IT   +VL++G++ +DP+ D +RSI
Sbjct: 265 AAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITEFYTVLLEGEDESDPLGDEIRSI 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHI L+R LA +G YP +D L SVSR+  +      +   + +   +   E+ +    
Sbjct: 323 LDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKNLTTLEDLQVFID 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +G YR G +   D A++  P + ++LKQS
Sbjct: 383 LGEYRAGQNAENDFAMNARPKLTNWLKQS 411


>gi|224498797|ref|ZP_03667146.1| flagellum-specific ATP synthase [Listeria monocytogenes Finland
           1988]
          Length = 433

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|284801046|ref|YP_003412911.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5578]
 gi|284994188|ref|YP_003415956.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5923]
 gi|284056608|gb|ADB67549.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5578]
 gi|284059655|gb|ADB70594.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5923]
          Length = 433

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|196033636|ref|ZP_03101048.1| putative flagellum-specific ATP synthase [Bacillus cereus W]
 gi|195994070|gb|EDX58026.1| putative flagellum-specific ATP synthase [Bacillus cereus W]
          Length = 434

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 216/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT V +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGVYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S++  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|47095282|ref|ZP_00232893.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str.
           1/2a F6854]
 gi|254829373|ref|ZP_05234060.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           N3-165]
 gi|254900048|ref|ZP_05259972.1| flagellum-specific ATP synthase [Listeria monocytogenes J0161]
 gi|254911399|ref|ZP_05261411.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes J2818]
 gi|254935726|ref|ZP_05267423.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes F6900]
 gi|47016353|gb|EAL07275.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str.
           1/2a F6854]
 gi|258601787|gb|EEW15112.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           N3-165]
 gi|258608310|gb|EEW20918.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes F6900]
 gi|293589337|gb|EFF97671.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes J2818]
          Length = 433

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|15803394|ref|NP_289427.1| ATP synthase SpaL [Escherichia coli O157:H7 EDL933]
 gi|15832984|ref|NP_311757.1| ATP synthase SpaL [Escherichia coli O157:H7 str. Sakai]
 gi|254794811|ref|YP_003079648.1| ATP synthase SpaL [Escherichia coli O157:H7 str. TW14359]
 gi|12517372|gb|AAG57986.1|AE005515_8 type III secretion apparatus protein [Escherichia coli O157:H7 str.
           EDL933]
 gi|13363202|dbj|BAB37153.1| type III secretion protein ATP synthetase EivC [Escherichia coli
           O157:H7 str. Sakai]
 gi|254594211|gb|ACT73572.1| type III secretion apparatus protein [Escherichia coli O157:H7 str.
           TW14359]
          Length = 439

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 9/331 (2%)

Query: 95  ISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIR 150
           I  S  + G V+NA G+ ++    D    +G+L   ++ ++PP+   +RV     +T IR
Sbjct: 94  IQISDAFLGSVLNASGQIMERFVPDTPGDRGNL--RLIDELPPSYQERRVINTPLETRIR 151

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           VID       GQR+G+FA +G GK+ L+ M   +   D  +I L+GERGREV E  E   
Sbjct: 152 VIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESLK 211

Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
              N  K V+V ATSD S + R  A L A T+AEYF  +G  V+L +DS+TR+A ++R++
Sbjct: 212 KSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRDM 271

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P  RGYP SVF  LPRLLER GP+   KG+IT   +VL++G++ +DP+ D +R
Sbjct: 272 KLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITEFYTVLLEGEDESDPLGDEIR 329

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGHI L+R LA +G YP +D L SVSR+  +      +   + +   +   E+ +  
Sbjct: 330 SILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKNLTTLEDLQVF 389

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +G YR G +   D A++  P + ++LKQS
Sbjct: 390 IDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420


>gi|229102348|ref|ZP_04233056.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-28]
 gi|228680995|gb|EEL35164.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-28]
          Length = 421

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/381 (38%), Positives = 221/381 (58%), Gaps = 12/381 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           L +VI I  +   + P G  E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 43  LCEVIAIEKENNMLLPFGQTEKVCYGDSVTLIAEDVVVPRGDHLLGKVLSANGEVLNED- 101

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 102 --AENIPLQKIKLDAPPIHAFEREEITNVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 159

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 160 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 219

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G++VLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 220 AKLATSIAEYFRDQGNDVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 278

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 279 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 336

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 337 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDI 396

Query: 414 YDFLKQSPSD-LSSEDVFQEI 433
             FLKQ  SD    +D+ Q I
Sbjct: 397 NTFLKQGRSDSFQFDDIVQAI 417


>gi|229183941|ref|ZP_04311157.1| Flagellum-specific ATP synthase [Bacillus cereus BGSC 6E1]
 gi|228599593|gb|EEK57197.1| Flagellum-specific ATP synthase [Bacillus cereus BGSC 6E1]
          Length = 429

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S++  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|228914328|ref|ZP_04077943.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845322|gb|EEM90358.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 429

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S++  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|30261747|ref|NP_844124.1| flagellum-specific ATP synthase [Bacillus anthracis str. Ames]
 gi|47526969|ref|YP_018318.1| flagellum-specific ATP synthase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49184578|ref|YP_027830.1| flagellum-specific ATP synthase [Bacillus anthracis str. Sterne]
 gi|49480938|ref|YP_035869.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|65319018|ref|ZP_00391977.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
           [Bacillus anthracis str. A2012]
 gi|165869417|ref|ZP_02214076.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0488]
 gi|167633458|ref|ZP_02391783.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0442]
 gi|167639099|ref|ZP_02397372.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0193]
 gi|170686315|ref|ZP_02877537.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0465]
 gi|170706497|ref|ZP_02896957.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0389]
 gi|177650573|ref|ZP_02933540.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0174]
 gi|190566502|ref|ZP_03019420.1| putative flagellum-specific ATP synthase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227815492|ref|YP_002815501.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           CDC 684]
 gi|229600159|ref|YP_002866147.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0248]
 gi|254683239|ref|ZP_05147100.1| flagellum-specific ATP synthase [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723826|ref|ZP_05185612.1| flagellum-specific ATP synthase [Bacillus anthracis str. A1055]
 gi|254734591|ref|ZP_05192303.1| flagellum-specific ATP synthase [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741000|ref|ZP_05198688.1| flagellum-specific ATP synthase [Bacillus anthracis str. Kruger B]
 gi|254755243|ref|ZP_05207277.1| flagellum-specific ATP synthase [Bacillus anthracis str. Vollum]
 gi|254759779|ref|ZP_05211803.1| flagellum-specific ATP synthase [Bacillus anthracis str. Australia
           94]
 gi|300117332|ref|ZP_07055122.1| flagellum-specific ATP synthase [Bacillus cereus SJ1]
 gi|30255975|gb|AAP25610.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           Ames]
 gi|47502117|gb|AAT30793.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178505|gb|AAT53881.1| flagellum-specific ATP synthase, putative [Bacillus anthracis str.
           Sterne]
 gi|49332494|gb|AAT63140.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|164714857|gb|EDR20375.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0488]
 gi|167512889|gb|EDR88262.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0193]
 gi|167531496|gb|EDR94174.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0442]
 gi|170128595|gb|EDS97462.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0389]
 gi|170670012|gb|EDT20753.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0465]
 gi|172083717|gb|EDT68777.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0174]
 gi|190562637|gb|EDV16604.1| putative flagellum-specific ATP synthase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227004999|gb|ACP14742.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           CDC 684]
 gi|229264567|gb|ACQ46204.1| putative flagellum-specific ATP synthase [Bacillus anthracis str.
           A0248]
 gi|298725167|gb|EFI65819.1| flagellum-specific ATP synthase [Bacillus cereus SJ1]
          Length = 434

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S++  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|16799799|ref|NP_470067.1| flagellum-specific ATP synthase [Listeria innocua Clip11262]
 gi|16413176|emb|CAC95956.1| lin0724 [Listeria innocua Clip11262]
          Length = 433

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A NR  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  I
Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T K+
Sbjct: 421 TLEETSKM 428


>gi|47091679|ref|ZP_00229475.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str.
           4b H7858]
 gi|254854543|ref|ZP_05243891.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           R2-503]
 gi|254932004|ref|ZP_05265363.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes
           HPB2262]
 gi|300764529|ref|ZP_07074522.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           N1-017]
 gi|47019998|gb|EAL10735.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str.
           4b H7858]
 gi|258607943|gb|EEW20551.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           R2-503]
 gi|293583555|gb|EFF95587.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes
           HPB2262]
 gi|300514883|gb|EFK41937.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           N1-017]
 gi|328475676|gb|EGF46425.1| flagellum-specific ATP synthase [Listeria monocytogenes 220]
          Length = 433

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|254824004|ref|ZP_05229005.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           J1-194]
 gi|293593231|gb|EFG00992.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           J1-194]
          Length = 433

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|313620038|gb|EFR91555.1| flagellar protein export ATPase FliI [Listeria innocua FSL S4-378]
          Length = 433

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A NR  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  I
Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T K+
Sbjct: 421 TLEETSKM 428


>gi|217425166|ref|ZP_03456661.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 576]
 gi|254186859|ref|ZP_04893375.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157934543|gb|EDO90213.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei Pasteur 52237]
 gi|217391771|gb|EEC31798.1| type III secretion protein ATP synthetase [Burkholderia
           pseudomallei 576]
          Length = 435

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/295 (40%), Positives = 175/295 (59%), Gaps = 3/295 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    R+ +E+   TG+R ID       GQR G+FA +G GK++L++M       D  ++
Sbjct: 130 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 189

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E       + ++VVV ATSD S + R  A L A TIAEYF   G +
Sbjct: 190 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 249

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L LDS+TR+A ++R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  
Sbjct: 250 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRVGSITAFY 307

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DPI D +RSI+DGH+ L+R L  +  +P +D L S SRL D+   A  + 
Sbjct: 308 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKSHFPAIDVLRSASRLFDEIADAPHRA 367

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L       + R +E +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 368 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 422


>gi|52143708|ref|YP_083120.1| flagellum-specific ATP synthase [Bacillus cereus E33L]
 gi|51977177|gb|AAU18727.1| flagellum-specific ATP synthase [Bacillus cereus E33L]
          Length = 434

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEDA 115

Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D++    + ++     PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GK
Sbjct: 116 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 171

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  
Sbjct: 172 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 231

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 232 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 290

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 291 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 348

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  
Sbjct: 349 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEG 408

Query: 413 IYDFLKQSPSD 423
           I  FLKQ  SD
Sbjct: 409 INTFLKQGRSD 419


>gi|289433994|ref|YP_003463866.1| flagellum-specific ATP synthase FliI [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289170238|emb|CBH26778.1| flagellum-specific ATP synthase FliI [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 433

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 236/428 (55%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G+ ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGEILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A NR  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  I
Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KLGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++    ++ 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           +  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E+V
Sbjct: 365 ENASKIREWMSIYQENELYFKLGTIEQTNDNASIFTSKEKSYFIHQFLKQ----LRDENV 420

Query: 430 FQEITKKL 437
             E T +L
Sbjct: 421 SLEETNQL 428


>gi|260775671|ref|ZP_05884567.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608087|gb|EEX34256.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 450

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 151/422 (35%), Positives = 233/422 (55%), Gaps = 20/422 (4%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFV-VHQGKNSDNLGQVIRINL 67
           LAE     L+   G ++SI         +S++    +GD   V   K++  L +V+  + 
Sbjct: 18  LAEMKQAALIRVEGQVTSIQGTL----IVSRFPAPRIGDLCEVWPNKSATLLAEVVAFDD 73

Query: 68  DIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGD-------DSL 119
           + V++  +   + +  G  LV  +   R+       GRV++  G+ + G+       D  
Sbjct: 74  EKVWLSALNPLDGVEAGAKLVPLYLPHRVRVGDFALGRVLDGFGRDMKGEGGVFSLLDVT 133

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G   + ++  + P  ++ R+     TG+R ID    L  GQR+G+FAG+G GK+TL++
Sbjct: 134 QSGSAKV-LIDDIDPT-DKPRISHPMPTGVRAIDALLTLGEGQRVGLFAGAGCGKTTLIA 191

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
             AR    D ++  L+GERGRE+ EFIE  L + L+ ++V+V ATSD S   R  A  TA
Sbjct: 192 EIARGMPCDVIVFGLIGERGRELNEFIEYELDEELQARTVLVCATSDRSSTERARAAFTA 251

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE F  +G  VLL++DS+TRFA + REI   +GE P   G+P SV + +PRLLER G
Sbjct: 252 TAIAEAFRDQGKKVLLMIDSLTRFARAQREIGLAAGEPPGRGGFPPSVAALMPRLLERAG 311

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           PS K  G+ITA+ +VL++ D+  DP+AD  RS+LDGHI+L+R LA+ G YP +D L S+S
Sbjct: 312 PSSK--GSITAIYTVLIEQDSMADPVADEARSLLDGHIILSRKLADRGHYPAIDVLPSLS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R      + + +        L+  + +   +  +G Y+PG D + D AV Q   +  FL+
Sbjct: 370 RTMSNVTTQEHQIAARRFRELLAAYRDVELLIKLGEYQPGSDPLTDVAVDQHAAMMTFLQ 429

Query: 419 QS 420
           QS
Sbjct: 430 QS 431


>gi|188026434|ref|ZP_02962069.2| hypothetical protein PROSTU_04162 [Providencia stuartii ATCC 25827]
 gi|188019853|gb|EDU57893.1| hypothetical protein PROSTU_04162 [Providencia stuartii ATCC 25827]
          Length = 413

 Score =  219 bits (559), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 187/308 (60%), Gaps = 8/308 (2%)

Query: 133 PPA--MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           PPA   +R+ +++   TGIR ID       GQRIG+FA +G GK++L++M       D  
Sbjct: 106 PPASVTSRRPIDEPLITGIRAIDGLLTCGLGQRIGIFAAAGSGKTSLMNMIINHAKADIH 165

Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +++L+GERGREV EFIE+     +  ++V++ ATSD  PI R  A L A TIAEYF  + 
Sbjct: 166 VVALIGERGREVIEFIEELQASPHAAQTVLIYATSDSPPIERCNAALLATTIAEYFRDRN 225

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +DS+TR+A ++R++A  +GELP  RGYP SVF +LP LLER  P   ++G+ITA
Sbjct: 226 RHVLLFVDSMTRYARALRDVALAAGELPARRGYPASVFEQLPMLLER--PGRMQQGSITA 283

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL++ +  +DPI D +RSILDGHI L+  LA +G YP +D L S+SR+  K  +   
Sbjct: 284 FYTVLLESEEESDPIGDEIRSILDGHIYLSHKLAGKGHYPAIDILHSISRVFQKVTTDTH 343

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++  + +   + R E+ +    +G Y+ G     D A+ +   I  FL+Q    +   + 
Sbjct: 344 RQAATKVRDRLSRLEQIQLYLELGEYQRGESEDNDNALDKKEDIEQFLQQK---MDEAEH 400

Query: 430 FQEITKKL 437
           F+ +  +L
Sbjct: 401 FETVLNRL 408


>gi|228907382|ref|ZP_04071240.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 200]
 gi|228852243|gb|EEM97039.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 200]
          Length = 429

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 147/381 (38%), Positives = 220/381 (57%), Gaps = 12/381 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GDLV       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDLVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD-LSSEDVFQEI 433
             FLKQ  SD    +D+ Q I
Sbjct: 405 NTFLKQGRSDSFQFDDIVQAI 425


>gi|75761139|ref|ZP_00741131.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218896682|ref|YP_002445093.1| putative flagellum-specific ATP synthase [Bacillus cereus G9842]
 gi|74491367|gb|EAO54591.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218543979|gb|ACK96373.1| putative flagellum-specific ATP synthase [Bacillus cereus G9842]
          Length = 434

 Score =  219 bits (558), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVILISEDVVVPRGNHLLGKVLSANGEVLNED- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LGD  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGDEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|229090710|ref|ZP_04221943.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-42]
 gi|228692652|gb|EEL46378.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-42]
          Length = 429

 Score =  219 bits (558), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVIPRGNHLLGKVLSANGEVLNEDA 110

Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D++    + ++     PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GK
Sbjct: 111 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  
Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 226

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  
Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEG 403

Query: 413 IYDFLKQSPSD 423
           I  FLKQ  SD
Sbjct: 404 INTFLKQGRSD 414


>gi|167724229|ref|ZP_02407465.1| ATP synthase SpaL [Burkholderia pseudomallei DM98]
          Length = 292

 Score =  219 bits (558), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/281 (41%), Positives = 170/281 (60%), Gaps = 3/281 (1%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG+R ID       GQR G+FA +G GK++L++M       D  +++L+GERGREV EF+
Sbjct: 1   TGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGERGREVSEFV 60

Query: 207 EDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E       + ++VVV ATSD S + R  A L A TIAEYF   G +V+L LDS+TR+A +
Sbjct: 61  ERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCDVMLFLDSMTRYARA 120

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +R++A  +GE P  RGYP SVF +LPRLLER  P     G+ITA  +VL++ +   DPI 
Sbjct: 121 LRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFYTVLLENEEEPDPIG 178

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D +RSI+DGH+ L+R L  +G +P +D L S SRL D+   A  + L       + R +E
Sbjct: 179 DEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRALAKRFRQHLARIDE 238

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +    +G YR G +   D A+ + P +  FL+Q+  + S+
Sbjct: 239 MQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 279


>gi|228900331|ref|ZP_04064561.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 4222]
 gi|228859366|gb|EEN03796.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 4222]
          Length = 429

 Score =  219 bits (558), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVILISEDVVVPRGNHLLGKVLSANGEVLNED- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LGD  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGDEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|228945352|ref|ZP_04107707.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228814324|gb|EEM60590.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 429

 Score =  219 bits (558), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|229096235|ref|ZP_04227208.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-29]
 gi|229115190|ref|ZP_04244600.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-3]
 gi|228668330|gb|EEL23762.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-3]
 gi|228687195|gb|EEL41100.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-29]
          Length = 367

 Score =  219 bits (558), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 143/368 (38%), Positives = 215/368 (58%), Gaps = 12/368 (3%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P G  E++  GD V       + P      G+V++A G+ ++ +    +     +I  
Sbjct: 2   LLPFGQTEKVCYGDSVTLIAEDVVVPRGDHLLGKVLSANGEVLNEN---AENIPLQKIKL 58

Query: 131 KVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   D
Sbjct: 59  DAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKAD 118

Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A   A +IAEYF  
Sbjct: 119 INVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRD 178

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  +KG+I
Sbjct: 179 QGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSI 235

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  S 
Sbjct: 236 TGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSP 295

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD-LS 425
           +  +L + +  ++  ++E      +G  +   +   + +  ++V  I  FLKQ  SD   
Sbjct: 296 NHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDINTFLKQGRSDSFQ 355

Query: 426 SEDVFQEI 433
            +D+ Q I
Sbjct: 356 FDDIVQAI 363


>gi|332311140|gb|EGJ24235.1| Flagellar protein export ATPase FliI [Listeria monocytogenes str.
           Scott A]
          Length = 394

 Score =  219 bits (557), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 214/384 (55%), Gaps = 14/384 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117
           L +VI I  +   + P    ++++ GD V+    +  I       G+V+NA G  ++ + 
Sbjct: 15  LCEVISIEKENNMLLPFNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEA 74

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            + K    M +  + PP  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 75  GVAKFKQKMPL--EAPPIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKS 132

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL M AR+   D  +I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A
Sbjct: 133 TLLGMIARNAKADINVIGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRA 192

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAE+F  +G  VLL++DS+TRFA + R +     +LP+  G    + S + +LL
Sbjct: 193 AKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLL 251

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  + G+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L
Sbjct: 252 ERSGKT--QNGSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVL 309

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++     + K  S +   +  ++E      +G      D   +  +  +   I
Sbjct: 310 GSVSRVMEEIVPESQWKTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFI 369

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
           + FLKQ    L  E V  E T KL
Sbjct: 370 HQFLKQ----LRDESVTLEETSKL 389


>gi|218902864|ref|YP_002450698.1| putative flagellum-specific ATP synthase [Bacillus cereus AH820]
 gi|218538318|gb|ACK90716.1| putative flagellum-specific ATP synthase [Bacillus cereus AH820]
          Length = 434

 Score =  219 bits (557), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|229155320|ref|ZP_04283431.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 4342]
 gi|228628245|gb|EEK84961.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 4342]
          Length = 429

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVIPRGNHLLGKVLSANGEVLNEN- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              K     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AKNIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|255591126|ref|XP_002535442.1| flagellum-specific ATP synthase alpha subunit, putative [Ricinus
           communis]
 gi|223523079|gb|EEF26938.1| flagellum-specific ATP synthase alpha subunit, putative [Ricinus
           communis]
          Length = 260

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/240 (47%), Positives = 154/240 (64%), Gaps = 1/240 (0%)

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D S ++R      A 
Sbjct: 1   MARYTTADVIVVGLIGERGREVQEFIEQILGPEGLARSVVVAAPADVSALMRLQGANYAT 60

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE F  +G NVLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G 
Sbjct: 61  AIAERFRQQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGN 120

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             + +G+ITA  +VL +GD+  DPIADS R+ILDGHIVLNR+LAE G YP +D   S+SR
Sbjct: 121 GARGEGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLNRTLAESGHYPAIDIEQSISR 180

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S + ++    L  L  R+   +D+  +G Y+PG D +LD A+ +   I  FL+Q
Sbjct: 181 AMHNITSKEHQQAARLLKQLYSRYLRNQDLIAVGAYQPGSDPMLDIAIKKRDQINAFLQQ 240


>gi|228984833|ref|ZP_04145005.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775031|gb|EEM23425.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 429

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  +++  I
Sbjct: 345 DSVSRIMEEIVSQTHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKIEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|46906967|ref|YP_013356.1| flagellum-specific ATP synthase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|226223347|ref|YP_002757454.1| H+-transporting ATP synthase alpha chain FliI, flagellar-specific
           [Listeria monocytogenes Clip81459]
 gi|46880233|gb|AAT03533.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|225875809|emb|CAS04512.1| Putative H+-transporting ATP synthase alpha chain FliI,
           flagellar-specific [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
          Length = 433

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|218988954|gb|ACL13617.1| invasion protein InvC [Salmonella enterica subsp. salamae serovar
           Sofia]
          Length = 431

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/297 (41%), Positives = 176/297 (59%), Gaps = 3/297 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P   +R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M       D  +I
Sbjct: 124 PSYASRVGVHEPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTEADVFVI 183

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGREV EF++     + K K V+V ATSD   + R  A   A T+AEYF  +G  
Sbjct: 184 GLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRDQGKR 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER  P    +G+ITA  
Sbjct: 244 VVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEGSITAFY 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+  +  +    +
Sbjct: 302 TVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAE 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             S++  L+ R EE +    +G YRPG ++  D+A+     +  +L Q  +  SS D
Sbjct: 362 QASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYSSFD 418


>gi|328467281|gb|EGF38361.1| flagellum-specific ATP synthase [Listeria monocytogenes 1816]
          Length = 387

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/384 (37%), Positives = 214/384 (55%), Gaps = 14/384 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117
           L +VI I  +   + P    ++++ GD V+    +  I       G+V+NA G  ++ + 
Sbjct: 8   LCEVISIEKENNMLLPFNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEA 67

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            + K    M +  + PP  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 68  GVAKFKQKMPL--EAPPIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKS 125

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL M AR+   D  +I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A
Sbjct: 126 TLLGMIARNAKADINVIGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRA 185

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAE+F  +G  VLL++DS+TRFA + R +     +LP+  G    + S + +LL
Sbjct: 186 AKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLL 244

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  + G+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L
Sbjct: 245 ERSGKT--QNGSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVL 302

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++     + K  S +   +  ++E      +G      D   +  +  +   I
Sbjct: 303 GSVSRVMEEIVPESQWKTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFI 362

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
           + FLKQ    L  E V  E T KL
Sbjct: 363 HQFLKQ----LRDESVTLEETSKL 382


>gi|56414846|ref|YP_151921.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363774|ref|YP_002143411.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|56129103|gb|AAV78609.1| virulence-associated secretory apparatus ATP synthase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197095251|emb|CAR60802.1| virulence-associated secretory apparatus ATP synthase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 431

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%)

Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           ++   PP+  +R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M      
Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I L+GERGREV EF++     + K K V+V ATSD   + R  A   A T+AEYF
Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER  P    +G
Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 295

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+  +  
Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +    +  S++  L+ R EE +    +G YRPG ++  D+A+     +  +L Q  +  S
Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 415

Query: 426 SED 428
           S D
Sbjct: 416 SFD 418


>gi|312913912|dbj|BAJ37886.1| flagellum-specific ATP synthase SpaL [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
          Length = 431

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%)

Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           ++   PP+  +R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M      
Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I L+GERGREV EF++     + K K V+V ATSD   + R  A   A T+AEYF
Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER  P    +G
Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 295

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+  +  
Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +    +  S++  L+ R EE +    +G YRPG ++  D+A+     +  +L Q  +  S
Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 415

Query: 426 SED 428
           S D
Sbjct: 416 SFD 418


>gi|301053286|ref|YP_003791497.1| flagellum-specific ATP synthase [Bacillus anthracis CI]
 gi|300375455|gb|ADK04359.1| flagellum-specific ATP synthase [Bacillus cereus biovar anthracis
           str. CI]
          Length = 434

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIVEDVVIPRGNHLLGKVLSANGEVLNEDA 115

Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D++    + ++     PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GK
Sbjct: 116 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 171

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  
Sbjct: 172 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 231

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 232 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 290

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 291 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 348

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  
Sbjct: 349 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEG 408

Query: 413 IYDFLKQSPSD 423
           I  FLKQ  SD
Sbjct: 409 INTFLKQGRSD 419


>gi|16761671|ref|NP_457288.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16766200|ref|NP_461815.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143155|ref|NP_806497.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|62181396|ref|YP_217813.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161615806|ref|YP_001589771.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167550257|ref|ZP_02344014.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167993129|ref|ZP_02574224.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230964|ref|ZP_02656022.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168235934|ref|ZP_02660992.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168242631|ref|ZP_02667563.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168261983|ref|ZP_02683956.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168463971|ref|ZP_02697888.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820409|ref|ZP_02832409.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194444136|ref|YP_002042135.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194448712|ref|YP_002046854.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194471262|ref|ZP_03077246.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194735197|ref|YP_002115846.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250901|ref|YP_002147791.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197262942|ref|ZP_03163016.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198246034|ref|YP_002216863.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200387383|ref|ZP_03213995.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204928219|ref|ZP_03219419.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205353837|ref|YP_002227638.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858156|ref|YP_002244807.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213425704|ref|ZP_03358454.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213580299|ref|ZP_03362125.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213649907|ref|ZP_03379960.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|224584672|ref|YP_002638470.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238909661|ref|ZP_04653498.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|289829398|ref|ZP_06547010.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|60415901|sp|P0A1B9|SPAL_SALTY RecName: Full=Probable ATP synthase SpaL; AltName: Full=Invasion
           protein InvC
 gi|60415902|sp|P0A1C0|SPAL_SALTI RecName: Full=Probable ATP synthase SpaL; AltName: Full=Invasion
           protein InvC
 gi|25290468|pir||AB0852 H+-transporting two-sector ATPase (EC 3.6.3.14) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421442|gb|AAL21774.1| surface presentation of antigens [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16503972|emb|CAD06001.1| secretory apparatus ATP synthase (associated with virulence)
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138788|gb|AAO70357.1| virulence-associated secretory apparatus ATP synthase [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|62129029|gb|AAX66732.1| surface presentation of antigens; secretory proteins [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365170|gb|ABX68938.1| hypothetical protein SPAB_03597 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402799|gb|ACF63021.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407016|gb|ACF67235.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194457626|gb|EDX46465.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194710699|gb|ACF89920.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195633641|gb|EDX52055.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197214604|gb|ACH52001.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197241197|gb|EDY23817.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197290878|gb|EDY30232.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197940550|gb|ACH77883.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199604481|gb|EDZ03026.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204322541|gb|EDZ07738.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205273618|emb|CAR38605.1| secretory apparatus ATP synthase (associated with virulence)
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205324685|gb|EDZ12524.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328758|gb|EDZ15522.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334542|gb|EDZ21306.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205337988|gb|EDZ24752.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205342956|gb|EDZ29720.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348978|gb|EDZ35609.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709959|emb|CAR34313.1| secretory apparatus ATP synthase (associated with virulence)
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224469199|gb|ACN47029.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261248030|emb|CBG25863.1| secretory apparatus ATP synthase (associated with virulence)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267995022|gb|ACY89907.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159453|emb|CBW18971.1| secretory apparatus ATP synthase (associated with virulence)
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|320087299|emb|CBY97064.1| surface presentation of antigens [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322614288|gb|EFY11219.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621648|gb|EFY18501.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624509|gb|EFY21342.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628840|gb|EFY25623.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633433|gb|EFY30175.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322635991|gb|EFY32699.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639699|gb|EFY36384.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322646882|gb|EFY43385.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322650650|gb|EFY47055.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322654737|gb|EFY51056.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322658958|gb|EFY55211.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664475|gb|EFY60669.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668276|gb|EFY64433.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673744|gb|EFY69845.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677805|gb|EFY73868.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681365|gb|EFY77397.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322683767|gb|EFY79777.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322715880|gb|EFZ07451.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323131246|gb|ADX18676.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323193844|gb|EFZ79047.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323200314|gb|EFZ85396.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323203183|gb|EFZ88212.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323205570|gb|EFZ90535.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323210081|gb|EFZ94984.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323216384|gb|EGA01111.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323221131|gb|EGA05562.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323226953|gb|EGA11135.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230763|gb|EGA14881.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234886|gb|EGA18972.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323238925|gb|EGA22975.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241625|gb|EGA25656.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248228|gb|EGA32164.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251188|gb|EGA35061.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323256072|gb|EGA39810.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263207|gb|EGA46745.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264290|gb|EGA47796.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271116|gb|EGA54544.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326624625|gb|EGE30970.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326628946|gb|EGE35289.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332989766|gb|AEF08749.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 431

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%)

Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           ++   PP+  +R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M      
Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I L+GERGREV EF++     + K K V+V ATSD   + R  A   A T+AEYF
Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER  P    +G
Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 295

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+  +  
Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +    +  S++  L+ R EE +    +G YRPG ++  D+A+     +  +L Q  +  S
Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 415

Query: 426 SED 428
           S D
Sbjct: 416 SFD 418


>gi|296162495|ref|ZP_06845286.1| ATPase, FliI/YscN family [Burkholderia sp. Ch1-1]
 gi|295887308|gb|EFG67135.1| ATPase, FliI/YscN family [Burkholderia sp. Ch1-1]
          Length = 440

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 187/333 (56%), Gaps = 9/333 (2%)

Query: 90  WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFK 146
           WG F    +A   GRV++ LG P+DG  +  +   S  + S+    +N   R  +   F 
Sbjct: 89  WGMF---DAAGLLGRVVDGLGNPLDGGPAP-QPLASAAVQSRTGATLNPLERPVITTPFA 144

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG+R ID       GQR G+FA +G GKST++ M A     D V+++L+GERGREV EFI
Sbjct: 145 TGVRAIDGLLTCGVGQRTGIFAPAGGGKSTIMGMIANGASTDAVVVALIGERGREVAEFI 204

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
            D+L      ++VV ATSD     R  A   A  +A    + G NVLL+ DS+TR+A ++
Sbjct: 205 HDHLERRRASTIVVAATSDRPAAERIKAAELAAQVAVGLRASGRNVLLLFDSLTRYARAL 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE+    GE P+  G+P SVF++LPRL+E  G +   +G+ITA  +VL D  + +DP+A+
Sbjct: 265 RELGLAVGEPPLRGGFPPSVFAQLPRLIESAGVT--AQGSITAFYTVLADEADLSDPVAE 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
             RS+LDGHI L+  L   G YP +D L S SRL  +   A  +   + +   + R+EE 
Sbjct: 323 EARSLLDGHIQLSSKLGAAGHYPAIDILRSRSRLMTRVAGAAHQAESNRVRDWLARYEEV 382

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             +  IG Y+ G D   D+A+ +   I  FL+Q
Sbjct: 383 ELLLQIGEYQHGNDADTDRAIDRRAAIERFLRQ 415


>gi|196039083|ref|ZP_03106390.1| putative flagellum-specific ATP synthase [Bacillus cereus
           NVH0597-99]
 gi|196030228|gb|EDX68828.1| putative flagellum-specific ATP synthase [Bacillus cereus
           NVH0597-99]
          Length = 434

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|228926785|ref|ZP_04089853.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229121301|ref|ZP_04250532.1| Flagellum-specific ATP synthase [Bacillus cereus 95/8201]
 gi|228662146|gb|EEL17755.1| Flagellum-specific ATP synthase [Bacillus cereus 95/8201]
 gi|228832898|gb|EEM78467.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 429

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNENA 110

Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
                ++ ++ I    PP  A  R+ +   F+TGI+ ID    +  GQ++G+FAGSG+GK
Sbjct: 111 E----NMPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKMGIFAGSGVGK 166

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  
Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 226

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S++  +L + +  ++  ++E      +G  +   +   + +  ++V  
Sbjct: 344 LDSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEG 403

Query: 413 IYDFLKQSPSD 423
           I  FLKQ  SD
Sbjct: 404 INTFLKQGRSD 414


>gi|21492905|ref|NP_659980.1| type III secretion system ATP synthase protein [Rhizobium etli CFN
           42]
 gi|218674849|ref|ZP_03524518.1| type III secretion system ATP synthase protein [Rhizobium etli
           GR56]
 gi|21467330|gb|AAM54993.1| type III secretion system ATP synthase protein [Rhizobium etli CFN
           42]
 gi|327192839|gb|EGE59765.1| type III secretion system ATP synthase protein [Rhizobium etli
           CNPAF512]
          Length = 439

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/283 (41%), Positives = 175/283 (61%), Gaps = 3/283 (1%)

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++R+ + + F +GI  +D       GQRIG+F   G GKSTL+S    ++  D ++ +LV
Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNKADVIVCALV 196

Query: 196 GERGREVREFIEDYLGDNLKKSV-VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV EF+ D + + +  +V +V+ATSD   + R  A +TA  IAEYF  +G +VLL
Sbjct: 197 GERGREVGEFVADNMPEGVASNVALVLATSDRPALERFKAVMTATAIAEYFREQGKHVLL 256

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A ++RE+   +GE PV RG+P SVF+ LP++ ER G S    G +TA  +VL
Sbjct: 257 VIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNS--ANGTMTAFYTVL 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+G+  +DPIA+  RS+LDGHIVL+  +A  G +P +D LAS SR      S   ++   
Sbjct: 315 VEGEEQDDPIAEETRSLLDGHIVLSDKIARAGNFPAIDVLASRSRTMSAVVSESHRQAAD 374

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            L  L+  ++E   +  +G YR G D  +D+AV +  +I  FL
Sbjct: 375 RLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFL 417


>gi|283478614|emb|CAY74530.1| Type III secretion system ATPase SpaI/InvC [Erwinia pyrifoliae DSM
           12163]
          Length = 413

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/290 (42%), Positives = 178/290 (61%), Gaps = 9/290 (3%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   TGIR ID       GQRIG+FA +G GK++L++M       D  +I L+GE
Sbjct: 113 RKPITEPLLTGIRAIDGLLTCGQGQRIGIFATAGCGKTSLMNMLIEHSEADIYVIGLIGE 172

Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E     + +  +V+V ATSD S + R  A   A +IAEYFS  G+NVLL +
Sbjct: 173 RGREVTEFVESMKKSSRRSRIVIVYATSDRSSVERSNAAQIASSIAEYFSELGNNVLLFV 232

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DSITR+A ++R++A + GE+PV RGYP SVF  LP+LLER  P     G+ITA  +VL++
Sbjct: 233 DSITRYARALRDVALSMGEMPVRRGYPASVFEALPKLLER--PGRFLTGSITAFYTVLIE 290

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   D I D VRSILDGHI L+R LA +G YP ++ L S+SR+  +    +++++ +  
Sbjct: 291 NEEDPDVIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSISRVFSQVTERNQQQMANCF 350

Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L+ R    RD++L   +G Y  G +   D A  +   + +FLKQ  ++
Sbjct: 351 RDLLQR---QRDMQLFIDLGEYHRGENENNDIAFDKNEQMEEFLKQDMTE 397


>gi|217965186|ref|YP_002350864.1| flagellar protein export ATPase FliI [Listeria monocytogenes HCC23]
 gi|290894014|ref|ZP_06556989.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           J2-071]
 gi|217334456|gb|ACK40250.1| flagellar protein export ATPase FliI [Listeria monocytogenes HCC23]
 gi|290556460|gb|EFD89999.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL
           J2-071]
 gi|307570255|emb|CAR83434.1| flagellum-specific ATP synthase [Listeria monocytogenes L99]
          Length = 433

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRTEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|313610094|gb|EFR85422.1| flagellar protein export ATPase FliI [Listeria monocytogenes FSL
           F2-208]
          Length = 433

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRTEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T KL
Sbjct: 421 TLEETSKL 428


>gi|404287|emb|CAA51921.1| surface presentation of antigens [Salmonella enterica subsp.
           enterica serovar Typhimurium]
          Length = 335

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%)

Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           ++   PP+  +R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M      
Sbjct: 22  VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 81

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I L+GERGREV EF++     + K K V+V ATSD   + R  A   A T+AEYF
Sbjct: 82  ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 141

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER  P    +G
Sbjct: 142 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 199

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+  +  
Sbjct: 200 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 259

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +    +  S++  L+ R EE +    +G YRPG ++  D+A+     +  +L Q  +  S
Sbjct: 260 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 319

Query: 426 SED 428
           S D
Sbjct: 320 SFD 322


>gi|85058543|ref|YP_454245.1| ATP synthase SpaL [Sodalis glossinidius str. 'morsitans']
 gi|45504751|gb|AAS66842.1| YsaN [Sodalis glossinidius]
 gi|84779063|dbj|BAE73840.1| type III secretion apparatus SpaL/InvC [Sodalis glossinidius str.
           'morsitans']
          Length = 435

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/286 (43%), Positives = 173/286 (60%), Gaps = 9/286 (3%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   T IR ID      HGQR+G+FA +G GK++L++M       D  ++ L+GE
Sbjct: 135 REPIAEKLITRIRAIDGLLTCGHGQRLGIFAAAGCGKTSLMNMLIEHSEADVYVVGLIGE 194

Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EFIE+    +    VV+V +TSD S + R  A   A T+AEYF  +G NVLL +
Sbjct: 195 RGREVTEFIEELKHSSRSGKVVLVNSTSDRSSVERCNAAQVATTVAEYFRDQGKNVLLFI 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DSITR+A ++R++A + GELP  RGYP SVF  LP+LLER  P   + G+ITA  +VL++
Sbjct: 255 DSITRYARALRDMALSMGELPARRGYPASVFERLPKLLER--PGSSQLGSITAFYTVLLE 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   D I D VRSILDGHI L+ +LA +G YP +D L S SRL  +     +++     
Sbjct: 313 NEEEPDAIGDEVRSILDGHIYLSHTLAAQGHYPAIDILRSTSRLFLQITDKQQQRAAVRF 372

Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             L+ R    RD++L   +G YR G +   D A  +  I+ DFL+Q
Sbjct: 373 RDLLVR---QRDMQLYLDLGEYRRGENQENDNAFDKENIMSDFLRQ 415


>gi|152975161|ref|YP_001374678.1| flagellum-specific ATP synthase [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023913|gb|ABS21683.1| ATPase, FliI/YscN family [Bacillus cytotoxicus NVH 391-98]
          Length = 434

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/304 (43%), Positives = 189/304 (62%), Gaps = 8/304 (2%)

Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           PP  A  R+ + + F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   D  
Sbjct: 128 PPIHAFEREEITEVFETGIKSIDAMLTIGVGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 187

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +ISLVGERGREV++FI   LG+  +KKSVVVVATSDES +++  A   A +IAEYF  +G
Sbjct: 188 VISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRAAKLATSIAEYFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
           +NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  +KG+IT 
Sbjct: 248 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KKGSITG 304

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  + D 
Sbjct: 305 IYTVLVDGDDLNGPVPDLARGILDGHIVLTRELATLNHYPAISVLDSVSRIMEEIVTPDH 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSS-E 427
            KL + +   +  ++E      +G  +   +   + +  +++  I  FLKQ  +D    E
Sbjct: 365 WKLANEIRKTLSIYKENELYFKLGTIQENEENAYIFECKNKIDGINTFLKQGRTDCYHFE 424

Query: 428 DVFQ 431
           D+ Q
Sbjct: 425 DIVQ 428


>gi|315281381|ref|ZP_07870018.1| flagellar protein export ATPase FliI [Listeria marthii FSL S4-120]
 gi|313614978|gb|EFR88485.1| flagellar protein export ATPase FliI [Listeria marthii FSL S4-120]
          Length = 433

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/428 (35%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++  +  G      ++  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T K+
Sbjct: 421 TLEETSKI 428


>gi|259908642|ref|YP_002648998.1| ATP synthase SpaL [Erwinia pyrifoliae Ep1/96]
 gi|224964264|emb|CAX55771.1| Type III secretion apparatus [Erwinia pyrifoliae Ep1/96]
          Length = 431

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/290 (42%), Positives = 178/290 (61%), Gaps = 9/290 (3%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   TGIR ID       GQRIG+FA +G GK++L++M       D  +I L+GE
Sbjct: 131 RKPITEPLLTGIRAIDGLLTCGQGQRIGIFATAGCGKTSLMNMLIEHSEADIYVIGLIGE 190

Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E     + +  +V+V ATSD S + R  A   A +IAEYFS  G+NVLL +
Sbjct: 191 RGREVTEFVESMKKSSRRSRIVIVYATSDRSSVERSNAAQIASSIAEYFSELGNNVLLFV 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DSITR+A ++R++A + GE+PV RGYP SVF  LP+LLER  P     G+ITA  +VL++
Sbjct: 251 DSITRYARALRDVALSMGEMPVRRGYPASVFEALPKLLER--PGRFLTGSITAFYTVLIE 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   D I D VRSILDGHI L+R LA +G YP ++ L S+SR+  +    +++++ +  
Sbjct: 309 NEEDPDVIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSISRVFSQVTERNQQQMANCF 368

Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L+ R    RD++L   +G Y  G +   D A  +   + +FLKQ  ++
Sbjct: 369 RDLLQR---QRDMQLFIDLGEYHRGENENNDIAFDKNEQMEEFLKQDMTE 415


>gi|42780842|ref|NP_978089.1| flagellum-specific ATP synthase [Bacillus cereus ATCC 10987]
 gi|42736762|gb|AAS40697.1| flagellum-specific ATP synthase, putative [Bacillus cereus ATCC
           10987]
          Length = 434

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|116872105|ref|YP_848886.1| flagellum-specific ATP synthase [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|116740983|emb|CAK20103.1| flagellum-specific ATP synthase [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 433

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 155/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  +      M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGIAPYKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  + +  +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  I
Sbjct: 128 PIHAFSRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLQKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L SVSR+ ++     + 
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K  S +   +  ++E      +G      D   +  +  +   I+ FLKQ    L  E V
Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420

Query: 430 FQEITKKL 437
             E T K+
Sbjct: 421 TLEETNKM 428


>gi|228964732|ref|ZP_04125839.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228794982|gb|EEM42481.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 429

 Score =  217 bits (552), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/381 (38%), Positives = 219/381 (57%), Gaps = 12/381 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD-LSSEDVFQEI 433
             FLKQ  SD    +D+ Q I
Sbjct: 405 NTFLKQGRSDSFQFDDIVQAI 425


>gi|196045076|ref|ZP_03112309.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB108]
 gi|196024078|gb|EDX62752.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB108]
          Length = 434

 Score =  217 bits (552), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 216/371 (58%), Gaps = 13/371 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116
           L +VI I  +   + P    E++  GD V       + P      G+V++A G  ++ D 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIEEDVVIPRGNHLLGKVLSANGGVLNEDA 115

Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D++    + ++     PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GK
Sbjct: 116 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 171

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           STLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  
Sbjct: 172 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 231

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +L
Sbjct: 232 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 290

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  
Sbjct: 291 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 348

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412
           L SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  
Sbjct: 349 LDSVSRIMEEIVSPTHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEG 408

Query: 413 IYDFLKQSPSD 423
           I  FLKQ  SD
Sbjct: 409 INTFLKQGRSD 419


>gi|312172191|emb|CBX80448.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 431

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/287 (41%), Positives = 174/287 (60%), Gaps = 3/287 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   TGIR ID       GQR+G+FA +G GK++L++M       D  +I L+GE
Sbjct: 131 RKTITEPLLTGIRAIDGLLTCGQGQRVGIFATAGCGKTSLMNMLIEHSQADIYVIGLIGE 190

Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E     + +  V++V ATSD S + R  A   A +IAEYFS  G NVLL +
Sbjct: 191 RGREVTEFVESMRHSSRRSRVILVYATSDRSSVERTNAAQIASSIAEYFSDMGKNVLLFI 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DSITR+A ++R++A + GE+P  RGYP SVF  LP+LLER  P     G ITA  +VL++
Sbjct: 251 DSITRYARALRDVALSMGEMPARRGYPASVFEALPKLLER--PGCFITGTITAFYTVLIE 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   D I D VRSILDGHI L+R LA +G YP ++ L S+SR+  +  +  ++++ +S 
Sbjct: 309 NEEEPDIIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSLSRVFSQVTNCHQQQMANSF 368

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L+ R  E +    +G YR G +   D A+ +   +  FLKQ  ++
Sbjct: 369 RDLLQRQSEMQLFIDLGEYRRGENETNDIAIDKSIQMEAFLKQDVTE 415


>gi|229172396|ref|ZP_04299955.1| Flagellum-specific ATP synthase [Bacillus cereus MM3]
 gi|228610867|gb|EEK68130.1| Flagellum-specific ATP synthase [Bacillus cereus MM3]
          Length = 429

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 216/370 (58%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++  +
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVAEDVVIPRGNHLLGKVLSANGEVLN--E 108

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           ++    L  +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 109 NVENIPLQ-KIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  +KKSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPTHWQLANEMRKILSVYKENELYFKLGTIQESAENSYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|190894058|ref|YP_001984352.1| type III secretion system ATP synthase protein [Rhizobium etli CIAT
           652]
 gi|190699719|gb|ACE93802.1| type III secretion system ATP synthase protein [Rhizobium etli CIAT
           652]
          Length = 439

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 117/283 (41%), Positives = 175/283 (61%), Gaps = 3/283 (1%)

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++R+ + + F +GI  +D       GQRIG+F   G GKSTL+S    ++  D ++ +LV
Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNKADVIVCALV 196

Query: 196 GERGREVREFIEDYLGDNLKKSV-VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV EF+   + + +  +V +VVATSD   + R  A +TA  IAEYF  +G +VLL
Sbjct: 197 GERGREVGEFVAGNMPEGVPSNVTLVVATSDRPALERFKAVMTATAIAEYFREQGKHVLL 256

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A ++RE+   +GE PV RG+P SVF+ LP++ ER G S    G +TA  +VL
Sbjct: 257 VIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNS--ANGMMTAFYTVL 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+G+  +DPIA+  RS+LDGHIVL+  +A+ G +P +D LAS SR      S   ++   
Sbjct: 315 VEGEEQDDPIAEETRSLLDGHIVLSDKIAKAGNFPAIDVLASRSRTMSAVVSESHRQAAD 374

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            L  L+  ++E   +  +G YR G D  +D+AV +  +I  FL
Sbjct: 375 RLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFL 417


>gi|47566132|ref|ZP_00237170.1| type III secretion cytoplasmic ATPase SctN TC0040 [Bacillus cereus
           G9241]
 gi|47557049|gb|EAL15379.1| type III secretion cytoplasmic ATPase SctN TC0040 [Bacillus cereus
           G9241]
          Length = 434

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  +KKS+VVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|118477185|ref|YP_894336.1| flagellum-specific ATP synthase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416410|gb|ABK84829.1| flagellum-specific ATP synthase [Bacillus thuringiensis str. Al
           Hakam]
          Length = 434

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVIPRGNHLLGKVLSANGEVLNEN- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSVYKENELYFKLGTIQENTENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|222095373|ref|YP_002529433.1| flagellum-specific ATP synthase [Bacillus cereus Q1]
 gi|221239431|gb|ACM12141.1| flagellum-specific ATP synthase [Bacillus cereus Q1]
          Length = 434

 Score =  216 bits (549), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 142/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KS+VVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSIVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|292488063|ref|YP_003530940.1| type III secretion system ATPase SpaI/InvC [Erwinia amylovora
           CFBP1430]
 gi|292899274|ref|YP_003538643.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
 gi|291199122|emb|CBJ46236.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
 gi|291553487|emb|CBA20532.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora
           CFBP1430]
          Length = 431

 Score =  216 bits (549), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 120/287 (41%), Positives = 174/287 (60%), Gaps = 3/287 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   TGIR ID       GQR+G+FA +G GK++L++M       D  +I L+GE
Sbjct: 131 RKTITEPLLTGIRAIDGLLTCGQGQRVGIFATAGCGKTSLMNMLIEHSQADIYVIGLIGE 190

Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E     + +  V++V ATSD S + R  A   A +IAEYFS  G NVLL +
Sbjct: 191 RGREVTEFVESMRHSSRRSRVILVYATSDRSSVERTNAAQIASSIAEYFSDMGKNVLLFI 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DSITR+A ++R++A + GE+P  RGYP SVF  LP+LLER  P     G ITA  +VL++
Sbjct: 251 DSITRYARALRDVALSMGEMPARRGYPASVFEALPKLLER--PGCFITGTITAFYTVLIE 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   D I D VRSILDGHI L+R LA +G YP ++ L S+SR+  +  +  ++++ +S 
Sbjct: 309 NEEEPDIIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSLSRVFSQVTNCHQQQMANSF 368

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L+ R  E +    +G YR G +   D A+ +   +  FLKQ  ++
Sbjct: 369 RDLLQRQSEMQLFIDLGEYRRGENEKNDIAIDKSIQMEAFLKQDVTE 415


>gi|228952129|ref|ZP_04114224.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229069301|ref|ZP_04202591.1| Flagellum-specific ATP synthase [Bacillus cereus F65185]
 gi|229078931|ref|ZP_04211483.1| Flagellum-specific ATP synthase [Bacillus cereus Rock4-2]
 gi|229127075|ref|ZP_04256074.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-Cer4]
 gi|229178158|ref|ZP_04305529.1| Flagellum-specific ATP synthase [Bacillus cereus 172560W]
 gi|228605288|gb|EEK62738.1| Flagellum-specific ATP synthase [Bacillus cereus 172560W]
 gi|228656428|gb|EEL12267.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-Cer4]
 gi|228704345|gb|EEL56779.1| Flagellum-specific ATP synthase [Bacillus cereus Rock4-2]
 gi|228713788|gb|EEL65673.1| Flagellum-specific ATP synthase [Bacillus cereus F65185]
 gi|228807661|gb|EEM54185.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 429

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|30019794|ref|NP_831425.1| flagellum-specific ATP synthase [Bacillus cereus ATCC 14579]
 gi|218233432|ref|YP_002366435.1| flagellum-specific ATP synthase [Bacillus cereus B4264]
 gi|29895339|gb|AAP08626.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 14579]
 gi|218161389|gb|ACK61381.1| putative flagellum-specific ATP synthase [Bacillus cereus B4264]
          Length = 434

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|228920460|ref|ZP_04083805.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229189846|ref|ZP_04316857.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 10876]
 gi|228593654|gb|EEK51462.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 10876]
 gi|228839090|gb|EEM84386.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 429

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQQNEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|229160713|ref|ZP_04288705.1| Flagellum-specific ATP synthase [Bacillus cereus R309803]
 gi|228622728|gb|EEK79562.1| Flagellum-specific ATP synthase [Bacillus cereus R309803]
          Length = 429

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 145/379 (38%), Positives = 217/379 (57%), Gaps = 12/379 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V         P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVAVPRGNHLLGKVLSANGEVLNEN- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  +KKSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S +  +  + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPNHWQFANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD-LSSEDVFQ 431
             FLKQ  +D    ED+ Q
Sbjct: 405 NTFLKQGRADCFHFEDIVQ 423


>gi|228938863|ref|ZP_04101463.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971744|ref|ZP_04132365.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978353|ref|ZP_04138730.1| Flagellum-specific ATP synthase [Bacillus thuringiensis Bt407]
 gi|228781370|gb|EEM29571.1| Flagellum-specific ATP synthase [Bacillus thuringiensis Bt407]
 gi|228787834|gb|EEM35792.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820712|gb|EEM66737.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 429

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|326939363|gb|AEA15259.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 434

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|229029429|ref|ZP_04185512.1| Flagellum-specific ATP synthase [Bacillus cereus AH1271]
 gi|228731888|gb|EEL82787.1| Flagellum-specific ATP synthase [Bacillus cereus AH1271]
          Length = 429

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/306 (42%), Positives = 189/306 (61%), Gaps = 8/306 (2%)

Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   D  
Sbjct: 123 PPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 182

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +ISLVGERGREV++FI   LG+  +KKS+VVVATSDES +++  A   A +IAEYF  +G
Sbjct: 183 VISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRAAKLATSIAEYFRDQG 242

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
           +NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  +KG+IT 
Sbjct: 243 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSITG 299

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  S   
Sbjct: 300 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPTH 359

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD-LSSE 427
            +L + +  ++  ++E      +G  +   +   + +  ++V  I  FLKQ  SD    +
Sbjct: 360 WQLANEMRKILSIYKENELYFKLGTIQENEENAYVFECKNKVEGINSFLKQGRSDRFQFD 419

Query: 428 DVFQEI 433
           D+ Q +
Sbjct: 420 DIVQAV 425


>gi|212711705|ref|ZP_03319833.1| hypothetical protein PROVALCAL_02780 [Providencia alcalifaciens DSM
           30120]
 gi|212685807|gb|EEB45335.1| hypothetical protein PROVALCAL_02780 [Providencia alcalifaciens DSM
           30120]
          Length = 430

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/292 (41%), Positives = 178/292 (60%), Gaps = 5/292 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   TGIR ID       GQR+G+FA +G GK++L++M       D  I++L+GE
Sbjct: 130 RRPINEPMVTGIRAIDGLLTCGLGQRMGIFAAAGSGKTSLMNMLINQAHGDIHIVALIGE 189

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EFIE+     +  K+++V ATSD  PI R  A L A  +AEYF   G +VLL +
Sbjct: 190 RGREVIEFIEELKQSPHADKTILVYATSDSPPIERCNAALLATAMAEYFRDLGRHVLLYV 249

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR+A ++R++A  +GELP  RGYP SVF +LP LLER  P   ++G ITA  +VL++
Sbjct: 250 DSMTRYARALRDVALATGELPARRGYPASVFEQLPLLLER--PGRVKQGAITAFYTVLLE 307

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            ++  DPI D +RSILDGHI L+  LA  G YP +D L S+SR+  K  + + ++    +
Sbjct: 308 SEDEADPIGDEIRSILDGHIYLSHKLAGRGHYPAIDILHSISRVFQKVTTPEHRQFAVDV 367

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + R E+ +    +G Y+ G     D+A+ +   I  FL+QS  +  SED
Sbjct: 368 RENLSRLEQIQLYLELGEYQRGESQENDRALDKQSNINQFLQQSMDE--SED 417


>gi|229149951|ref|ZP_04278179.1| Flagellum-specific ATP synthase [Bacillus cereus m1550]
 gi|228633632|gb|EEK90233.1| Flagellum-specific ATP synthase [Bacillus cereus m1550]
          Length = 429

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMQKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|229138449|ref|ZP_04267038.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST26]
 gi|228644986|gb|EEL01229.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST26]
          Length = 429

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/381 (38%), Positives = 221/381 (58%), Gaps = 12/381 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++  +
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLN--E 108

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           ++    L  +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 109 NVENIPLQ-KIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  +KKS+VVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD-LSSEDVFQEI 433
             FLKQ  SD    +D+ Q +
Sbjct: 405 NTFLKQGRSDRFQFDDIVQAV 425


>gi|292487267|ref|YP_003530139.1| type III secretion system ATPase SpaI/InvC [Erwinia amylovora
           CFBP1430]
 gi|292900361|ref|YP_003539730.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
 gi|291200209|emb|CBJ47337.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
 gi|291552686|emb|CBA19731.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora
           CFBP1430]
 gi|312171375|emb|CBX79634.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora ATCC
           BAA-2158]
          Length = 431

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/374 (35%), Positives = 204/374 (54%), Gaps = 22/374 (5%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK------ 111
             QVI  N +   +  +      S  +++   G+ FR++ S    G +++A G       
Sbjct: 47  FAQVIGFNKEHTLLSLLNDNNGFSRDNVLLPTGKPFRVAVSERTLGAILDATGTIQGRLD 106

Query: 112 --PI---DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
             P+    G ++L  G +  +   + P A+          TG+R ID       GQR+G+
Sbjct: 107 GGPVAAPTGGENLETGGVPRDFTQRKPIAVP-------LATGVRAIDGLLTCGQGQRMGI 159

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSD 225
           FA +G GK++L+SM       D  +I L+GERGREV EF+E+    + +  VV+V ATSD
Sbjct: 160 FAAAGCGKTSLMSMIIEHSEADIYVIGLIGERGREVTEFVEELRRSSRRSKVVLVYATSD 219

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
            S + R  A   A T+AEYF  +G NVLL +DS+TR+A ++R++A + GELP  RGYP S
Sbjct: 220 RSCVERCNAAQVASTVAEYFCEQGKNVLLFIDSVTRYARALRDVALSMGELPARRGYPAS 279

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           VF  LP+LLER  P     G+I+A  +VL++ +  +D I D VRSILDGHI L++ LA +
Sbjct: 280 VFEALPKLLER--PGRFLTGSISAFYTVLIENEEESDVIGDEVRSILDGHIYLSKKLAAK 337

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G YP +D L S+SR+  +    + ++L +     + R  + +    +G Y+ G +   D 
Sbjct: 338 GHYPAIDVLQSISRVFQQVTQPEHQQLATHFRDYLVRQNDMQLFIDLGEYKRGENEDNDA 397

Query: 406 AVHQVPIIYDFLKQ 419
           A  +   +  FLKQ
Sbjct: 398 AFDKKSAMEAFLKQ 411


>gi|324325767|gb|ADY21027.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 434

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KS+VVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSIVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 410 NTFLKQGRSD 419


>gi|217959233|ref|YP_002337781.1| flagellum-specific ATP synthase [Bacillus cereus AH187]
 gi|217063731|gb|ACJ77981.1| putative flagellum-specific ATP synthase [Bacillus cereus AH187]
          Length = 434

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/381 (38%), Positives = 221/381 (58%), Gaps = 12/381 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++  +
Sbjct: 56  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLN--E 113

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           ++    L  +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 114 NVENIPLQ-KIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  +KKS+VVVATSDES +++  A
Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRA 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 292 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409

Query: 414 YDFLKQSPSD-LSSEDVFQEI 433
             FLKQ  SD    +D+ Q +
Sbjct: 410 NTFLKQGRSDRFQFDDIVQAV 430


>gi|228958029|ref|ZP_04119765.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229144361|ref|ZP_04272767.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST24]
 gi|228639148|gb|EEK95572.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST24]
 gi|228801654|gb|EEM48535.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 429

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ + 
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|229043503|ref|ZP_04191213.1| Flagellum-specific ATP synthase [Bacillus cereus AH676]
 gi|228725881|gb|EEL77128.1| Flagellum-specific ATP synthase [Bacillus cereus AH676]
          Length = 429

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 213/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++   
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLN--- 107

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 108 EKAENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|228933033|ref|ZP_04095896.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826634|gb|EEM72405.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 429

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/368 (38%), Positives = 215/368 (58%), Gaps = 7/368 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++ +D
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLN-ED 109

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +       +++ +    A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKSTL
Sbjct: 110 AENIPLQKIKLDASPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTL 169

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
           L M A++   D  +ISLVGERGREV++FI   LG+  + KSVVVVATSDES +++  A  
Sbjct: 170 LGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMGKSVVVVATSDESHLMQLRAAK 229

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER
Sbjct: 230 LATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLER 288

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L S
Sbjct: 289 SGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDS 346

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYD 415
           VSR+ ++  S +  +L + +  ++  ++E      +G  +   +   + +  ++V  I  
Sbjct: 347 VSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGINT 406

Query: 416 FLKQSPSD 423
           FLKQ  SD
Sbjct: 407 FLKQGRSD 414


>gi|229017037|ref|ZP_04173957.1| Flagellum-specific ATP synthase [Bacillus cereus AH1273]
 gi|229023218|ref|ZP_04179729.1| Flagellum-specific ATP synthase [Bacillus cereus AH1272]
 gi|228738143|gb|EEL88628.1| Flagellum-specific ATP synthase [Bacillus cereus AH1272]
 gi|228744308|gb|EEL94390.1| Flagellum-specific ATP synthase [Bacillus cereus AH1273]
          Length = 376

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/367 (38%), Positives = 214/367 (58%), Gaps = 14/367 (3%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSME-IM 129
           + P    E++  GD V       + P      G+V++A G+ ++ D      ++ +E I 
Sbjct: 11  LLPFEQTEKVCYGDSVTLIAEDVVVPRGNHLLGKVLSANGEVLNEDAE----NIPVEKIK 66

Query: 130 SKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
              PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   
Sbjct: 67  LDAPPIHAFEREEITDVFETGIKAIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKA 126

Query: 188 DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +ISLVGERGREV++FI   LG+  +K+SVVVVATSDES +++  A   A +IAEYF 
Sbjct: 127 DINVISLVGERGREVKDFIRKELGEEGMKRSVVVVATSDESHLMQLRAAKLATSIAEYFR 186

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER    + +KG+
Sbjct: 187 DQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLER--SRKTKKGS 243

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  S
Sbjct: 244 ITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVS 303

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD-L 424
            +  +L + +  ++  ++E      +G  +   +   + +  ++V  I  FLKQ  +D  
Sbjct: 304 PNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNRVEDINMFLKQGRTDCF 363

Query: 425 SSEDVFQ 431
             EDV Q
Sbjct: 364 HFEDVVQ 370


>gi|310767459|gb|ADP12409.1| ATP synthase SpaL [Erwinia sp. Ejp617]
          Length = 431

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/290 (42%), Positives = 176/290 (60%), Gaps = 9/290 (3%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   TGIR ID       GQRIG+FA +G GK++L++M       D  +I L+GE
Sbjct: 131 RKPITEPLLTGIRAIDGLLTCGQGQRIGIFATAGCGKTSLMNMLIEHSEADIYVIGLIGE 190

Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E       +  VV+V ATSD S + R  A   A +IAEYFS  G NVLL +
Sbjct: 191 RGREVTEFVESMKKSARRSRVVLVYATSDRSSVERSNAAQIASSIAEYFSDMGYNVLLFV 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DSITR+A ++R++A + GE+PV RGYP SVF  LP+LLER  P     G+ITA  +VL++
Sbjct: 251 DSITRYARALRDVALSMGEMPVRRGYPASVFEALPKLLER--PGRFLTGSITAFYTVLIE 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   D I D VRSILDGHI L+R LA +G YP ++ L S+SR+  +    +++++ +  
Sbjct: 309 NEEDPDVIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSISRVFSQVTDRNQQQMANCF 368

Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L+ R    RD++L   +G Y  G +   D A  +   + +FLKQ  ++
Sbjct: 369 RDLLQR---QRDMQLFIDLGEYHRGENENNDIAFDKNEQMEEFLKQDMTE 415


>gi|329943246|ref|ZP_08292020.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila psittaci Cal10]
 gi|332287825|ref|YP_004422726.1| type III secretion system ATPase [Chlamydophila psittaci 6BC]
 gi|313848397|emb|CBY17401.1| putative flagellum-specific ATP synthase [Chlamydophila psittaci
           RD1]
 gi|325507079|gb|ADZ18717.1| type III secretion system ATPase [Chlamydophila psittaci 6BC]
 gi|328814793|gb|EGF84783.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila psittaci Cal10]
 gi|328915086|gb|AEB55919.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila psittaci
           6BC]
          Length = 434

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/421 (35%), Positives = 224/421 (53%), Gaps = 19/421 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S ++     V  LS   CLG+   +   K+ D L +VI  +     +  +     ++
Sbjct: 21  GLLSRVSGNLLEVQGLS--ACLGELCRICTPKHPDILAEVIGFHNQTTLLMSLSPMYHVA 78

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R   +  S    GRVI+  G P+D  +SL K  +   ++S  P  M+RQ +
Sbjct: 79  LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKESLPKTQIK-PLISPPPSPMSRQPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGI+ ID F  L  GQRIGVF+  G GKS+LLS  A        +I+L+GERGRE
Sbjct: 138 QEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIASGSKSTINVIALIGERGRE 197

Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VRE+IE +  G    ++++V + + E+   + ++   A+TIAEYF  +G +VL I+DS++
Sbjct: 198 VREYIEQHASGLKHHRTIIVASPAHETAPTKVISGRAAMTIAEYFRDQGHDVLFIMDSLS 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +++E+A  +GE   A  Y  SVF  +    ER G    E+G+ITA+ ++L    NH
Sbjct: 258 RWIAALQEVALATGETLAAHHYAASVFHHVSEFTERAG--NNERGSITALYAILYY-PNH 314

Query: 321 NDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            D   D ++S+LDGH  L    ++LA     PP+D L S+SR A K            L 
Sbjct: 315 PDIFTDYLKSLLDGHFFLTHQGKALAS----PPIDILLSLSRSAKKLALPHHYAAAEKLR 370

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  ++E  DI  +G Y PG D  LD AV  +P I +FL Q    LSS    +   K+L
Sbjct: 371 SLLKTYQEALDIIHLGAYSPGHDKDLDDAVKILPSIKNFLSQP---LSSYCQLENTLKEL 427

Query: 438 Q 438
           +
Sbjct: 428 E 428


>gi|206974741|ref|ZP_03235656.1| putative flagellum-specific ATP synthase [Bacillus cereus H3081.97]
 gi|206746760|gb|EDZ58152.1| putative flagellum-specific ATP synthase [Bacillus cereus H3081.97]
          Length = 434

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%)

Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           PP  A  R+ + + F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   D  
Sbjct: 128 PPIHAFEREEITEVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 187

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A   A +IAEYF  +G
Sbjct: 188 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDEG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
           +NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  +KG IT 
Sbjct: 248 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KKGAITG 304

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  S   
Sbjct: 305 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPTH 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423
            +L + +  ++  ++E      +G  +   +   + +  ++V  I  FLKQ  SD
Sbjct: 365 WQLANEMRKILSIYKENELYFKLGTIQENTENAYIFECKNKVEGINTFLKQGRSD 419


>gi|323155927|gb|EFZ42093.1| type III secretion system ATPase domain protein [Escherichia coli
           EPECa14]
          Length = 267

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/256 (45%), Positives = 157/256 (61%), Gaps = 2/256 (0%)

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL 230
           G+GKSTLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + 
Sbjct: 1   GVGKSTLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALE 60

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R  A  TA TIAE+F  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVF+ L
Sbjct: 61  RMKAAFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFASL 120

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P+LLER GP+   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P 
Sbjct: 121 PKLLERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPA 178

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D   S SR+      ++  +  +    LI  ++    +  IG Y  G D   DKA+   
Sbjct: 179 IDIGLSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNR 238

Query: 411 PIIYDFLKQSPSDLSS 426
             I  F++QS  D+SS
Sbjct: 239 KAIQSFIQQSTKDISS 254


>gi|270491110|ref|ZP_06208182.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|270334853|gb|EFA45632.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|317374484|gb|ADV16659.1| type III secretion cytoplasmic ATP synthase [Yersinia pestis]
          Length = 248

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/236 (47%), Positives = 156/236 (66%), Gaps = 3/236 (1%)

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +++L+GERGREVREFIE  LG+  L+K+V+VVATSD   + R  A   A +IAEYF  +G
Sbjct: 1   MLALIGERGREVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQG 60

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S K  G+ITA
Sbjct: 61  KRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITA 118

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  S + 
Sbjct: 119 LYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEH 178

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           K     L  L+ ++EE   +  IG Y+ G D   D+A+ ++  I  +L Q   +LS
Sbjct: 179 KTWAGDLRRLLAKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELS 234


>gi|1870711|gb|AAB48835.1| FliI [Sinorhizobium meliloti]
          Length = 217

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/203 (51%), Positives = 147/203 (72%), Gaps = 2/203 (0%)

Query: 5   LETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           +  LA L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+V
Sbjct: 15  VAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGEV 74

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +R+  + V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PIDG  +L +G
Sbjct: 75  VRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQG 134

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D+   I +  PP+M R+RVE+GF+TG+R IDI +PLC G+R+G+FAGS +GKSTLLSM A
Sbjct: 135 DIRRSIANTAPPSMTRKRVEQGFRTGVRAIDILSPLCLGRRLGIFAGSAVGKSTLLSMLA 194

Query: 183 RSDCFDKVIISLVGERGREVREF 205
           R+D FDKV+I+LVGERGREVREF
Sbjct: 195 RADAFDKVVIALVGERGREVREF 217


>gi|222082187|ref|YP_002541552.1| type III secretion system ATP synthase protein [Agrobacterium
           radiobacter K84]
 gi|221726866|gb|ACM29955.1| type III secretion system ATP synthase protein [Agrobacterium
           radiobacter K84]
          Length = 439

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/441 (32%), Positives = 235/441 (53%), Gaps = 14/441 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG--Q 61
           +E LA+L +   +    +  G ++S++ +       +  V +G+    +   +D +G   
Sbjct: 2   VEALARLEKAIDQTRTRRASGRVTSVSGLLVRANVPA--VRIGELCELREPGTDEVGFAD 59

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
           V+ I  +   +   G    IS+   V   GR   I+      G VI+A G  I   + + 
Sbjct: 60  VVGIEGETALLSLHGTTRGISVRTEVIPTGREPVIAVGDFLLGAVIDAHGNIIRKAEGVT 119

Query: 121 --KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              G+ S  + +  P  + R+ V +    GI  ID       GQR+G+F   G GKSTL+
Sbjct: 120 GRAGETSQPLYASPPAPLARRPVARHLPVGIPAIDGLLTCGEGQRVGIFGPPGAGKSTLV 179

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM-APLT 237
           S   ++   D V+ +LVGERGRE+ EF+E  +    + + V+V  + E P L +  A LT
Sbjct: 180 SDIVKNVDADVVVCALVGERGREIGEFVELVMPAGARSNAVLVTATSERPALERFKAVLT 239

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE+F  +G  V+L++DS+TR A ++REI   +GE PV RG+P SVF+ LP++ ER 
Sbjct: 240 ATAIAEHFRDRGKRVVLVVDSVTRLARALREIGLAAGEPPVRRGFPPSVFALLPQIFERA 299

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S   +G +TA  +VLV+G+   DPIA+  R++LDGHIVL+  +A+ G++P +D LAS 
Sbjct: 300 GNS--AEGTMTAFYTVLVEGEERTDPIAEETRALLDGHIVLSDRIAQAGQFPAIDILASR 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR  +   +   ++    L  ++  ++E   +  +G Y+ G D  +D+AV +  +I +FL
Sbjct: 358 SRTMNAVVTETHRRASDRLRSMLALYKEVELLIRVGEYQDGRDAAIDEAVRKRTLIGNFL 417

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
               +   S   F+E   +LQ
Sbjct: 418 FSGHAKAPS---FEETVARLQ 435


>gi|206970526|ref|ZP_03231478.1| putative flagellum-specific ATP synthase [Bacillus cereus AH1134]
 gi|206734162|gb|EDZ51332.1| putative flagellum-specific ATP synthase [Bacillus cereus AH1134]
          Length = 434

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%)

Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   D  
Sbjct: 128 PPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 187

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A   A +IAEYF  +G
Sbjct: 188 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
           +NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  +KG+IT 
Sbjct: 248 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSITG 304

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  S   
Sbjct: 305 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPHH 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423
            +L + +  ++  ++E      +G  +   +   + +  ++V  I  FLKQ  SD
Sbjct: 365 WQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGINTFLKQGRSD 419


>gi|229195962|ref|ZP_04322715.1| Flagellum-specific ATP synthase [Bacillus cereus m1293]
 gi|228587521|gb|EEK45586.1| Flagellum-specific ATP synthase [Bacillus cereus m1293]
          Length = 367

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%)

Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           PP  A  R+ + + F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   D  
Sbjct: 61  PPIHAFEREEITEVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 120

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A   A +IAEYF  +G
Sbjct: 121 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDEG 180

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
           +NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  +KG IT 
Sbjct: 181 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KKGAITG 237

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  S   
Sbjct: 238 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPTH 297

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423
            +L + +  ++  ++E      +G  +   +   + +  ++V  I  FLKQ  SD
Sbjct: 298 WQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGINTFLKQGRSD 352


>gi|296502349|ref|YP_003664049.1| flagellum-specific ATP synthase [Bacillus thuringiensis BMB171]
 gi|296323401|gb|ADH06329.1| flagellum-specific ATP synthase [Bacillus thuringiensis BMB171]
          Length = 367

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%)

Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M A++   D  
Sbjct: 61  PPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 120

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A   A +IAEYF  +G
Sbjct: 121 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDQG 180

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
           +NVLL++DS+TRFA + R +     ELP+  G    + S + +LLER G +  +KG+IT 
Sbjct: 181 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSITG 237

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L SVSR+ ++  S   
Sbjct: 238 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPHH 297

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423
            +L + +  ++  ++E      +G  +   +   + +  ++V  I  FLKQ  SD
Sbjct: 298 WQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGINTFLKQGRSD 352


>gi|238796114|ref|ZP_04639625.1| ATP synthase spaL [Yersinia mollaretii ATCC 43969]
 gi|238720059|gb|EEQ11864.1| ATP synthase spaL [Yersinia mollaretii ATCC 43969]
          Length = 430

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/326 (37%), Positives = 191/326 (58%), Gaps = 8/326 (2%)

Query: 101 WCGRVINALGKPIDGDDSLGK-GDLSMEIMSKV--PPAMN--RQRVEKGFKTGIRVIDIF 155
             G++ NA G+ +   +S     + S  ++ +V  PP     R+ V +   TG+R ID  
Sbjct: 88  LAGKIYNAAGEEVGVLNSEAVLAEPSFTVLRRVDNPPVAVELRRPVSEPLVTGVRAIDGL 147

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNL 214
                GQR+G+FA +G GK++L+SM       D  I++L+GERGREV EFI +  +    
Sbjct: 148 LTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICIVALIGERGREVTEFIHELQVSPRS 207

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            ++++V ATSD   + R  A L A  +AEYF  +G +VLL +DS+TR+A ++R++A  +G
Sbjct: 208 AQTILVYATSDSPAVERCNAALLATAMAEYFRDQGRDVLLFVDSMTRYARALRDVALAAG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ELP  RGYP SVF +LP LLER  P   + G+ITA  +VL++ +  +DPI D +RSI+DG
Sbjct: 268 ELPARRGYPASVFEQLPLLLER--PGAVQHGSITAFYTVLLESEEESDPIGDEIRSIIDG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HI L+  LA  G YP +D L S+SR+  K  +   ++  +    ++ R ++ +    +G 
Sbjct: 326 HIYLSAKLAGRGHYPAIDILHSISRVFSKVSTPVHRQAAAKTRDMLGRLDQIQLYLDLGE 385

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
           Y+ G +   D A+    +I  FL+QS
Sbjct: 386 YQRGENADNDHALDNREVIEGFLQQS 411


>gi|238759392|ref|ZP_04620557.1| ATP synthase spaL [Yersinia aldovae ATCC 35236]
 gi|238702419|gb|EEP94971.1| ATP synthase spaL [Yersinia aldovae ATCC 35236]
          Length = 414

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/333 (36%), Positives = 184/333 (55%), Gaps = 24/333 (7%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-------------RQRVEKGFKT 147
             G++ NA G+ +        G LS    S  PP                R+ V     T
Sbjct: 72  LAGKIYNAAGEEV--------GVLSNVTASSEPPLTTLCRVDSPPVSVNLRRPVTTPLVT 123

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           G+R ID       GQR+G+FA +G GK++L+SM       D  +I+L+GERGREV EFI 
Sbjct: 124 GVRAIDGLLTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICVIALIGERGREVTEFIH 183

Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +        ++++V ATSD   + R  A L A  +AEYF  +G +VLL +DS+TR+A ++
Sbjct: 184 ELQASPRAAQTILVYATSDSPAVERCNAALLATAMAEYFRDQGKDVLLFVDSMTRYARAL 243

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           R++A  +GELP  RGYP SVF +LP LLER  P   ++G+ITA  +VL++ +  +DPI D
Sbjct: 244 RDVALAAGELPARRGYPASVFEQLPLLLER--PGALQQGSITAFYTVLLESEEESDPIGD 301

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            +RSI+DGHI L+  LA  G YP +D L S+SR+  K  +   ++  +    ++ R  + 
Sbjct: 302 EIRSIIDGHIYLSAQLAGRGHYPAIDVLHSISRVFSKVTTPQHRQDAAKTRDMLARLAQI 361

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +    +G Y+ G +   D A+    +I  FL+Q
Sbjct: 362 QLYLDLGEYQRGENTDNDHALDNREVIESFLQQ 394


>gi|91782707|ref|YP_557913.1| ATPase FliI/YscN [Burkholderia xenovorans LB400]
 gi|91686661|gb|ABE29861.1| type III secretion system ATPase, FliI/YscN [Burkholderia
           xenovorans LB400]
          Length = 444

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/337 (37%), Positives = 186/337 (55%), Gaps = 18/337 (5%)

Query: 90  WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-------MNRQRVE 142
           WG F    +A   GRV++ LG P+DG      G +   + S    A       + R  + 
Sbjct: 94  WGTF---DAAGLLGRVVDGLGNPLDG------GPVPRPLASAAAQAGEGTLNPLERPVIA 144

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F TG+R ID       GQR G+FA +G GKST++ M A     D ++++L+GERGREV
Sbjct: 145 TPFATGVRAIDGLLTCGVGQRTGIFAPAGGGKSTIMGMIANGASTDAIVVALIGERGREV 204

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            EFI D+L      ++V+ ATSD     R  A   A  +A    + G NVLL+ DS+TR+
Sbjct: 205 AEFIHDHLERRRASTIVIAATSDRPAAERIKAAELASQVAVGLRASGRNVLLLFDSLTRY 264

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A ++RE+    GE P+  G+P SVF++LPRL+E  G +   +G+ITA  +VL D  + +D
Sbjct: 265 ARALRELGLAVGEPPLRGGFPPSVFAQLPRLIEAAGVT--AQGSITAFYTVLADEADLSD 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           P+A+  RS+LDGHI L+  L   G YP +D L S SRL  +  +A  +   + +   + R
Sbjct: 323 PVAEEARSLLDGHIQLSSKLGAAGHYPAIDILRSRSRLMTRVAAAVHQADANRVRDWLAR 382

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +E+   +  IG Y+ G D   D+A+ +   I  FL+Q
Sbjct: 383 YEDVELLLQIGEYQRGNDADTDQAIDRRAAIVSFLRQ 419


>gi|229109206|ref|ZP_04238805.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-15]
 gi|228674216|gb|EEL29461.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-15]
          Length = 429

 Score =  213 bits (542), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 142/370 (38%), Positives = 213/370 (57%), Gaps = 11/370 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           L +VI I  +   + P    E++  GD V       + P      G+V++A G+ ++   
Sbjct: 51  LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLN--- 107

Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +I    PP  A  R+ +   F+TGI+ ID    +  GQ+IG+FAGSG+GKS
Sbjct: 108 EKAENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
           TLL M A++   D  +ISLVGERGREV++FI   LG+  ++KSVVVVATSDES +++  A
Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +I+EYF  +G+NVLL++DS+TRFA + R +     ELP+  G    + S + +LL
Sbjct: 228 AKLATSISEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +  +KG+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA    YP +  L
Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413
            SVSR+ ++  S    +L + +  ++  ++E      +G  +   +   + +  ++V  I
Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDI 404

Query: 414 YDFLKQSPSD 423
             FLKQ  SD
Sbjct: 405 NTFLKQGRSD 414


>gi|213023037|ref|ZP_03337484.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 278

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/279 (41%), Positives = 168/279 (60%), Gaps = 3/279 (1%)

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           +R ID       GQR+G+FA +G GK+ L+ M       D  +I L+GERGREV EF++ 
Sbjct: 1   MRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTEADVFVIGLIGERGREVTEFVDM 60

Query: 209 YLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               + K K V+V ATSD   + R  A   A T+AEYF  +G  V+L +DS+TR+A ++R
Sbjct: 61  LRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALR 120

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           ++A  SGE P  RGYP SVF  LPRLLER  P    +G+ITA  +VL++ +   DP+AD 
Sbjct: 121 DVALASGERPARRGYPASVFDNLPRLLER--PGATSEGSITAFYTVLLESEEEADPMADE 178

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           +RSILDGH+ L+R LA +G YP +D L SVSR+  +  +    +  S++  L+ R EE +
Sbjct: 179 IRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQ 238

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               +G YRPG ++  D+A+     +  +L Q  +  SS
Sbjct: 239 LFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYSS 277


>gi|330975869|gb|EGH75935.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 379

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/358 (39%), Positives = 208/358 (58%), Gaps = 16/358 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +       S  V  GD   V +   S  L +++    +   +  +G  + I 
Sbjct: 26  GRVSAVRGILLECKIPSAKV--GDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135
           +G  +   G   RI       G V++  G+P+ GD  LG          ++ +++   P 
Sbjct: 84  VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+
Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+REF++  L + L ++SV+V ATSD S + R  A  TA  IAE F ++G  VLL
Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262

Query: 255 ILDSITRFAHSIREIATNSGELPVAR-GYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           +LDS+TRFA + REI   SGE P+ R G P  V++ LPRL+ER G S  E G+ITA+ +V
Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPPVYTLLPRLVERAGMS--ENGSITALYTV 319

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++
Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQR 377


>gi|330945803|gb|EGH47202.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. pisi str. 1704B]
          Length = 271

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/264 (46%), Positives = 177/264 (67%), Gaps = 7/264 (2%)

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           ++ +++   P   R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+
Sbjct: 4   TLPVIADALPPTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARN 63

Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            DC D ++  L+GERGRE+REF++  L + L ++SV+V ATSD S + R  A  TA  IA
Sbjct: 64  MDC-DVIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIA 122

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR-GYPTSVFSELPRLLERIGPSE 301
           E F ++G  VLL+LDS+TRFA + REI   SGE P+ R G P SV++ LPRL+ER G S 
Sbjct: 123 EAFRARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMS- 180

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            E G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+ 
Sbjct: 181 -ENGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRIL 239

Query: 362 DKAWSADEKKLVSSLTHLIHRFEE 385
                 + ++  + L  L+  +++
Sbjct: 240 SNVTGREHQRANNRLRQLLAAYKQ 263


>gi|123443731|ref|YP_001007702.1| ATP synthase SpaL [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|122090692|emb|CAL13568.1| type III secretion sytem protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 430

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/299 (39%), Positives = 178/299 (59%), Gaps = 7/299 (2%)

Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P ++N R+ V     TG+R ID       GQR+G+FA +G GK++L+SM       D  +
Sbjct: 124 PVSVNLRRPVTTPLVTGVRAIDGLLTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICV 183

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREV EFI +        ++++V ATSD   + R  A L A  +AEYF  +G 
Sbjct: 184 IALIGERGREVTEFIHELQTSPRAAQTILVYATSDSPAVERCNAALLATAMAEYFRDQGK 243

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +DS+TR+A ++R++A  +GELP  RGYP SVF +LP LLER  P   + G+ITA 
Sbjct: 244 DVLLFVDSMTRYARALRDVALAAGELPARRGYPASVFEQLPLLLER--PGALQHGSITAF 301

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL++ +  +DPI D +RSI+DGHI L+  LA  G YP +D L S+SR+  K  +   +
Sbjct: 302 YTVLLESEEESDPIGDEIRSIIDGHIYLSAQLAGRGHYPAIDILHSISRVFSKVTTPQHR 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS---PSDLSS 426
           +  +    ++ R  + +    +G Y+ G +   D A+    +I  FL+Q+   P + S+
Sbjct: 362 QDAAKTRDMLGRLAQIQLYLDLGEYQRGENTDNDHALDNRDVIEGFLQQAMEEPGEFST 420


>gi|293416355|ref|ZP_06658994.1| ATP synthase in type III secretion protein SctN [Escherichia coli
           B185]
 gi|291431711|gb|EFF04694.1| ATP synthase in type III secretion protein SctN [Escherichia coli
           B185]
          Length = 431

 Score =  211 bits (536), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/322 (39%), Positives = 188/322 (58%), Gaps = 6/322 (1%)

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           + +  G+    I S   P   R  + +   TG+RVID       GQR+G+FA +G GK+T
Sbjct: 110 EPMSSGEEERVIDSGALPYTLRAGIHEPLVTGVRVIDGLLTCGVGQRMGIFAPAGCGKTT 169

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VVVVATSDESPILRKMA 234
           L+ M       D  +I L+GERGREV EF+E +L  + +KS  V+V ATSD S + R+ A
Sbjct: 170 LMHMLINQTDADVFVIGLIGERGREVTEFVE-WLKQSPEKSRCVLVFATSDYSSVDRRNA 228

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            L A T+AE+F  +G  V+L +DS+TR+  ++R++A  +GE P  RGYP SVF  LP LL
Sbjct: 229 ALLATTVAEFFRDQGKRVVLFIDSLTRYTRALRDVALFAGEPPARRGYPASVFDSLPALL 288

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER  P     G+ITA  +VL++G++  DP+AD + SILDGHI L+R LA +G YP VD L
Sbjct: 289 ER--PGATPGGSITAFYTVLLEGEDEVDPMADEICSILDGHIFLSRKLAGQGHYPAVDVL 346

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+  +  +   +     +  L+ R +E + +  +G YR G +   D+A+     + 
Sbjct: 347 RSVSRVFSQVTAPPHQARSVEIRRLMTRLDELQLLVDLGEYRQGENAENDRAMQLRRPLE 406

Query: 415 DFLKQSPSDLSS-EDVFQEITK 435
            +L Q  S  SS E+  Q + +
Sbjct: 407 RWLCQPVSQYSSFENTLQGMNE 428


>gi|89897912|ref|YP_515022.1| type III secretion system ATPase [Chlamydophila felis Fe/C-56]
 gi|89331284|dbj|BAE80877.1| type III secretory flagellar biosynthesis ATP synthase
           [Chlamydophila felis Fe/C-56]
          Length = 434

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 221/421 (52%), Gaps = 19/421 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S ++        LS   CLG+   V   K  D L +VI  +     +  +     ++
Sbjct: 21  GLLSKVSGTLLEAQGLS--ACLGELCRVCTPKYPDLLAEVIGFHNQTTLLMSLSPMHYVT 78

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R   +  S    GRVI+  G P+D  ++L K  +   ++S  P  M+RQ +
Sbjct: 79  LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKENLPKTHIK-PLISPPPLPMSRQPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGI+VID F  L  GQRIGVF+  G GKS+LLS  A        +I+L+GERGRE
Sbjct: 138 QEIFPTGIKVIDAFLTLGKGQRIGVFSEPGSGKSSLLSTIASGSKSTINVIALIGERGRE 197

Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VRE+IE +  G    ++V++ + + E+   + M+   A+TIAEYF  +G +VL I+DS++
Sbjct: 198 VREYIEQHASGLQEHRTVIIASPAHETAPTKVMSGRAAMTIAEYFRDQGHDVLFIMDSLS 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +++E+A  +GE   A  Y   VF  +    ER G    ++G+ITA+ ++L    NH
Sbjct: 258 RWIAALQEVALATGETLAAHNYAAYVFHHVSEFTERAG--NNDRGSITALYAIL-HYPNH 314

Query: 321 NDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            D   D ++S+LDGH  L    ++LA     PP+D L S+SR A K            L 
Sbjct: 315 PDIFTDYLKSLLDGHFFLTNQGKALAS----PPIDILLSLSRSAKKLSLPHHYAAAEKLR 370

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  ++E  DI  +G Y PG D  LD AV  +P I  FL Q    LSS    +   K+L
Sbjct: 371 SLLKTYQEALDIIHLGAYTPGHDKDLDDAVKILPNIKKFLAQP---LSSYCQLENTLKEL 427

Query: 438 Q 438
           +
Sbjct: 428 E 428


>gi|62185479|ref|YP_220264.1| type III secretion system ATPase [Chlamydophila abortus S26/3]
 gi|62148546|emb|CAH64317.1| putative flagellum-specific ATP synthase [Chlamydophila abortus
           S26/3]
          Length = 434

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/421 (35%), Positives = 222/421 (52%), Gaps = 19/421 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S ++     V  LS   CLG+   +   K  D L +VI  +     +  +     ++
Sbjct: 21  GLLSRVSGNLLEVQGLS--ACLGELCRICTPKYPDILAEVIGFHNQTTLLMSLSPMHHVA 78

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R   +  S    GRVI+  G P+D  +SL K  +   ++S  P  M+RQ +
Sbjct: 79  LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKESLPKTQIK-PLISPPPSPMSRQPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGI+ ID F  L  GQRIGVF+  G GKS+LLS  A        +I+L+GERGRE
Sbjct: 138 QEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIASGSKSTINVIALIGERGRE 197

Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VRE+IE +  G    ++++V + + E+   + ++   A+TIAEYF  +G +VL I+DS++
Sbjct: 198 VREYIEQHASGLKHHRTIIVASPAHETAPTKVISGRAAMTIAEYFRDQGHDVLFIMDSLS 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +++E+A  +GE   A  Y  SVF  +    ER G    E+G+ITA+ ++L    NH
Sbjct: 258 RWIAALQEVALATGETLAAHHYAASVFHHVSEFTERAG--NNERGSITALYAILYY-PNH 314

Query: 321 NDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            D   D ++S+LDGH  L    ++LA     P +D L S+SR A K            L 
Sbjct: 315 PDIFTDYLKSLLDGHFFLTHQGKALAS----PSIDILLSLSRSAKKLALPHHYAAAEKLR 370

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  ++E  DI  +G Y PG D  LD AV  +P I +FL Q    LSS    +   K+L
Sbjct: 371 SLLKTYQEALDIIHLGAYSPGHDKDLDDAVKILPSIKNFLSQ---PLSSYCQLENTLKEL 427

Query: 438 Q 438
           +
Sbjct: 428 E 428


>gi|15088603|gb|AAK84114.1|AF369954_12 YsaN [Yersinia enterocolitica]
 gi|2352532|gb|AAB69192.1| YsaN [Yersinia enterocolitica]
          Length = 465

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/290 (39%), Positives = 174/290 (60%), Gaps = 4/290 (1%)

Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P ++N R+ V     TG+R ID       GQR+G+FA +G GK++L+SM       D  +
Sbjct: 124 PVSVNLRRPVTTPLVTGVRAIDGLLTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICV 183

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREV EFI +        ++++V ATSD   + R  A L A  +AEYF  +G 
Sbjct: 184 IALIGERGREVTEFIHELQTSPRAAQTILVYATSDSPAVERCNAALLATAMAEYFRDQGK 243

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +DS+TR+A ++R++A  +GELP  RGYP SVF +LP LLER  P   + G+ITA 
Sbjct: 244 DVLLFVDSMTRYARALRDVALAAGELPARRGYPASVFEQLPLLLER--PGALQHGSITAF 301

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL++ +  +DPI D +RSI+DGHI L+  LA  G YP +D L S+SR+  K  +   +
Sbjct: 302 YTVLLESEEESDPIGDEIRSIIDGHIYLSAQLAGRGHYPAIDILHSISRVFSKVTTPQHR 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    ++ R  + +    +G Y+ G +   D A+    +I  FL+Q+
Sbjct: 362 QDAAKTRDMLGRLAQIQLYLDLGEYQRGENTDNDHALDNRDVIEGFLQQA 411


>gi|497222|gb|AAA74038.1| invC [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 432

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/272 (42%), Positives = 165/272 (60%), Gaps = 4/272 (1%)

Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           ++   PP+  +R  V +   TG+R ID       GQR+G+FA +G GK+ L+ M      
Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I L+GERGREV EF++     + K K V+V ATSD   + R  A   A T+AEYF
Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER  P    +G
Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGGTSEG 295

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+  +  
Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +    +  S++  L+ R EE +    +G YRP
Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRP 387


>gi|22726545|gb|AAN05313.1|AF467290_3 InvC [primary endosymbiont of Sitophilus zeamais]
          Length = 436

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 187/337 (55%), Gaps = 17/337 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP------PAMNRQRVEKGFK 146
           F+I       G V+++LG      D  G  D ++ +    P          R+ + + F 
Sbjct: 87  FQIGLGDALLGAVLDSLGNICARLD--GATDDALTVTEHRPIDVGALHFTERRPIAEKFV 144

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           T IR ID      HGQ +G+FA +G GK++L++M       D  ++ L+GERGREV EFI
Sbjct: 145 TRIRAIDGLLTCGHGQCLGIFAAAGCGKTSLMNMLIEHSEADVYVVGLIGERGREVTEFI 204

Query: 207 EDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E+    +    VV+V +TSD S   R  A     T+AEYF  +G NVLL +DSITR+A +
Sbjct: 205 EELKHSSCSGKVVLVNSTSDRSAGERYNAAQVXTTVAEYFHDQGKNVLLFIDSITRYARA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +R++A + GELP  RGYP SVF  LP+LLER  P     G+ITA  +VL++ D   D I 
Sbjct: 265 LRDMALSMGELPARRGYPASVFERLPKLLER--PGSSWLGSITAFYTVLLENDEEPDAIG 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D VRSILDGHI L+ +LA +G YP +D L S SRL  +     +++       L+ R   
Sbjct: 323 DEVRSILDGHIYLSPTLASQGHYPAIDILRSTSRLFLQITDQKQQRAAVRFRDLLVR--- 379

Query: 386 TRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            RD++L   +G YR G +   D A  +  ++ +FL+Q
Sbjct: 380 QRDMQLYLDLGEYRRGENEENDNAFDKKMVMSEFLRQ 416


>gi|284007669|emb|CBA73382.1| type III secretion sytem ATP synthase SpaL,YscN,MxiB,HrcN,EscN
           [Arsenophonus nasoniae]
          Length = 427

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 181/302 (59%), Gaps = 19/302 (6%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM---FARS 184
           + +  P  ++R+ +   F TGIR ID       GQR+G+FA +G GK+ L++M   +A++
Sbjct: 117 VNTNAPDFLSRKPITNYFATGIRAIDGLLTCGVGQRLGIFAAAGCGKTILMNMLINYAQA 176

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDNLKKS------VVVVATSDESPILRKMAPLTA 238
           D F   +I+L+GERGREV EF+     D LK+S      +++ +TSD+  + R  A L A
Sbjct: 177 DIF---VIALIGERGREVTEFV-----DELKRSPRGSQTILISSTSDQPAVDRCNAALVA 228

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            T+AEYF  +  +V+L +DSITR+  ++R++A  SGELPV +G+P SVF +LP LLER  
Sbjct: 229 TTVAEYFRDQNKHVILFIDSITRYCRALRDVALASGELPVRKGFPASVFEQLPTLLER-- 286

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P   +K  +TA  ++L++ +   D I D +RSILDGHI L++ LA +G YP +D L S S
Sbjct: 287 PGNTQKSALTAFYTILLENEEEPDAIGDEIRSILDGHIYLSQQLAAQGHYPAIDILRSTS 346

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL  +     ++    +  H + +    + ++ +G YR G +   D+ + +   I  FL+
Sbjct: 347 RLFQQITEQQQQTAARNFQHCLTQLASLKLLQELGEYRTGENDDHDQVIKKKSAIEQFLQ 406

Query: 419 QS 420
           QS
Sbjct: 407 QS 408


>gi|253990943|ref|YP_003042299.1| type III secretion ATP synthase hrcN [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782393|emb|CAQ85557.1| Putative Type III secretion ATP synthase hrcN [Photorhabdus
           asymbiotica]
          Length = 406

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/363 (35%), Positives = 203/363 (55%), Gaps = 19/363 (5%)

Query: 87  VFHWGRFRISPSACWC---------GRVINALGKPIDGDDSL--GKGDLSMEIMSKVPPA 135
           V   G+  I PS  +C         G+VIN  G+ + GD  L   K    + I  +  P 
Sbjct: 48  VLRNGKVEI-PSRRFCFPMNEDALIGKVINCYGESLYGDAYLEMNKEYFDLPISIEPIPL 106

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            NR  +EK F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++
Sbjct: 107 KNRASIEKVFPTKLKIIDGLFTIGEGQRVGLFAPAGAGKTTTVSIMANNMDADVVIFAMI 166

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER REV EF+E  +G + ++K++ +V+TS+ +P+ +  + L AV+IA YF  +G  V+L
Sbjct: 167 GERAREVVEFLEGEIGPEVIRKAITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVL 226

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
             DS+TRFA   R  A   G  P+  G P  V   L RL+E  G S    G++T + +VL
Sbjct: 227 YFDSLTRFA---RAQAMLDGT-PIQGGIPIGVSLALSRLVESCGNSVY--GSVTGIFTVL 280

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           ++ D  +DPIA  V+S++DGH+V +  +A  GRYP +D L S SRL +K       ++  
Sbjct: 281 IETDIDSDPIAHEVKSLIDGHLVYSTMIASTGRYPAIDVLKSKSRLQNKIQDKRYVQMSE 340

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +  +++R+ +   +  +G Y  G DL+ D A+   P I +FLKQ    +  E+  QE+ 
Sbjct: 341 RIKDMVYRYFDVELLIRVGEYEKGNDLLTDNAIELYPEIMNFLKQGYEGVEYEETLQEME 400

Query: 435 KKL 437
           + L
Sbjct: 401 RIL 403


>gi|29840664|ref|NP_829770.1| type III secretion system ATPase [Chlamydophila caviae GPIC]
 gi|29835014|gb|AAP05648.1| virulence factor transport ATPase, putative [Chlamydophila caviae
           GPIC]
          Length = 434

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 150/422 (35%), Positives = 223/422 (52%), Gaps = 21/422 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S ++     V  LS   CLG+   +   K  D L +VI  +     +  +     ++
Sbjct: 21  GLLSRVSGNLLEVQGLS--ACLGELCRICTPKYPDLLAEVIGFHNQTTLLMSLSPMHYVA 78

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R   +  S    GRVI+  G P+D   SL K  +   +++  PP M+RQ +
Sbjct: 79  LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKKSLPKTHIK-PLIAPPPPPMSRQPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGI+ ID F  L  GQRIGVF+  G GKS+LLS  A        +I+L+GERGRE
Sbjct: 138 QEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIASGSKSTINVIALIGERGRE 197

Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           VRE+IE +    LK  ++++V + + E+   + +A   A+TIAEYF  +G +VL I+DS+
Sbjct: 198 VREYIEQH-SSGLKQLRTIIVASPAHETAPTKVIAGRAAMTIAEYFRDQGHDVLFIMDSL 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           +R+  +++E+A  +GE   A  Y  SVF  +    ER G    ++G+ITA+ ++L    N
Sbjct: 257 SRWIAALQEVALATGETLAAHQYAASVFHHVSEFTERAG--NNDRGSITALYAIL-HYPN 313

Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           H D   D ++S+LDGH  L    ++LA     PP+D L S+SR A K            L
Sbjct: 314 HPDIFTDYLKSLLDGHFFLTNQGKALAS----PPIDILLSLSRSAKKLSRPHHYAAAEKL 369

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  ++E  DI  +G Y PG D  LD AV  +P I  FL Q    LSS    +   K+
Sbjct: 370 RALLKTYQEALDIIQLGAYTPGQDKDLDDAVKILPNIKKFLSQP---LSSYCQLENTLKE 426

Query: 437 LQ 438
           L+
Sbjct: 427 LE 428


>gi|323189411|gb|EFZ74692.1| type III secretion system ATPase domain protein [Escherichia coli
           RN587/1]
          Length = 258

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/247 (44%), Positives = 152/247 (61%), Gaps = 2/247 (0%)

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A  TA 
Sbjct: 1   MICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTAT 60

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAEYF  +G NVLL++DS+TR+A + R++   SGE  V  G+P SVFS LP+LLER GP
Sbjct: 61  TIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGP 120

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +   KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE  +P +D   S SR
Sbjct: 121 A--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASR 178

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     +++  +  +    LI  ++    +  IG Y  G D   DKA+    +I +F++Q
Sbjct: 179 VMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQ 238

Query: 420 SPSDLSS 426
           S  D+SS
Sbjct: 239 STKDISS 245


>gi|313056273|dbj|BAJ39854.1| probable ATP synthase VscN2 [Vibrio mimicus]
          Length = 420

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 202/356 (56%), Gaps = 17/356 (4%)

Query: 91  GRFRISP--------SACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQR 140
           G+  I+P         +   G+VIN  G+ + GD  LG+    + + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNESALVGKVINCYGENLYGDSYLGQAGEFIDLPIAVEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA Y+  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S +  G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K       +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           ++R+     +  +G Y  G DL  D+A+ + P I +FLKQ    +  E+  QE+ +
Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415


>gi|313056231|dbj|BAJ39833.1| probable ATP synthase VscN2 [Vibrio mimicus]
          Length = 420

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 204/356 (57%), Gaps = 17/356 (4%)

Query: 91  GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140
           G+  I+P         +   G+VIN  G+ + GD  LG+ G+ + + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFTMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA Y+  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S +  G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K       +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           ++R+     +  +G Y  G DL  D+A+ + P I +FLKQ    +  E+  QE+ +
Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415


>gi|28901193|ref|NP_800848.1| putative ATPase YscN [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836030|ref|ZP_01988697.1| VcsN2 [Vibrio parahaemolyticus AQ3810]
 gi|260362752|ref|ZP_05775621.1| protein VcsN2 [Vibrio parahaemolyticus K5030]
 gi|260880040|ref|ZP_05892395.1| protein VcsN2 [Vibrio parahaemolyticus AN-5034]
 gi|260895157|ref|ZP_05903653.1| protein VcsN2 [Vibrio parahaemolyticus Peru-466]
 gi|28809706|dbj|BAC62681.1| putative ATPase YscN [Vibrio parahaemolyticus RIMD 2210633]
 gi|149750784|gb|EDM61529.1| VcsN2 [Vibrio parahaemolyticus AQ3810]
 gi|308085776|gb|EFO35471.1| protein VcsN2 [Vibrio parahaemolyticus Peru-466]
 gi|308092026|gb|EFO41721.1| protein VcsN2 [Vibrio parahaemolyticus AN-5034]
 gi|308112352|gb|EFO49892.1| protein VcsN2 [Vibrio parahaemolyticus K5030]
          Length = 420

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 204/356 (57%), Gaps = 17/356 (4%)

Query: 91  GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140
           G+  I+P         +   G+VIN  G+ + GD  LG+ G+ + + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA Y+  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S +  G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K       +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           ++R+     +  +G Y  G DL  D+A+ + P I +FLKQ    +  E+  QE+ +
Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415


>gi|313056225|dbj|BAJ39830.1| probable ATP synthase VscN2 [Vibrio mimicus]
 gi|313056243|dbj|BAJ39839.1| probable ATP synthase VscN2 [Vibrio mimicus]
 gi|313056249|dbj|BAJ39842.1| probable ATP synthase VscN2 [Vibrio mimicus]
 gi|313056255|dbj|BAJ39845.1| probable ATP synthase VscN2 [Vibrio mimicus]
 gi|313056261|dbj|BAJ39848.1| probable ATP synthase VscN2 [Vibrio mimicus]
          Length = 420

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 204/356 (57%), Gaps = 17/356 (4%)

Query: 91  GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140
           G+  I+P         +   G+VIN  G+ + GD  LG+ G+ + + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA Y+  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S +  G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K       +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           ++R+     +  +G Y  G DL  D+A+ + P I +FLKQ    +  E+  QE+ +
Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415


>gi|15618767|ref|NP_225053.1| type III secretion system ATPase [Chlamydophila pneumoniae CWL029]
 gi|33242218|ref|NP_877159.1| type III secretion system ATPase [Chlamydophila pneumoniae TW-183]
 gi|4377175|gb|AAD18996.1| Flagellum-specific ATP Synthase [Chlamydophila pneumoniae CWL029]
 gi|33236729|gb|AAP98816.1| H+-transporting ATP synthase alpha chain [Chlamydophila pneumoniae
           TW-183]
 gi|269302644|gb|ACZ32744.1| flagellum-specific ATP synthase FliI [Chlamydophila pneumoniae
           LPCoLN]
          Length = 433

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/422 (35%), Positives = 219/422 (51%), Gaps = 21/422 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S ++     V  LS   CLG+   +   K+ + L +VI  +     +  +     ++
Sbjct: 21  GLLSKVSGNLIEVDGLS--ACLGELCKISSTKDPNLLAEVIGFHNHTTLLMSLSPLHSVA 78

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R   +  S    GRV++A G PID  + L K      ++S  P  M RQ +
Sbjct: 79  LGTEVLPLRRPPSLHLSDHLLGRVLDAFGNPIDKKEDLPKTH-RKPLLSLPPSPMMRQPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGI+ ID F  L  GQRIGVF+  G GKS+LLS  A        +I+L+GERGRE
Sbjct: 138 DQIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIALGSKSTINVIALIGERGRE 197

Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           VRE+IE +  + LK  +++++ A + E+   + +A   A+TIAEYF  +G  VL I+DS+
Sbjct: 198 VREYIEKH-SNALKQQRTIIIAAPAHETAPTKVIAGRAAMTIAEYFREQGHEVLFIMDSL 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           +R+  +++E+A   GE   A  Y  SVF  +    ER G    +KG+ITA+ ++L     
Sbjct: 257 SRWIAALQEVALARGETLSAHQYAASVFHHVSEFTERAG--NNDKGSITALYAILY-YPK 313

Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           H D   D ++S+LDGH  L    ++LA     PP+D L+S+SR A              L
Sbjct: 314 HPDIFTDYLKSLLDGHFFLTSQGKALAS----PPIDILSSLSRSAQALALPHHYAAAERL 369

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  + E  DI  +G Y PG D  LDKAV  +P I  FL Q    LSS        K+
Sbjct: 370 RSLLKVYNEALDIIHLGAYTPGQDEELDKAVKLLPSIKAFLAQP---LSSYCYLDNTLKQ 426

Query: 437 LQ 438
           L+
Sbjct: 427 LE 428


>gi|301336260|ref|ZP_07224462.1| type III secretion system ATPase [Chlamydia muridarum MopnTet14]
          Length = 434

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 224/420 (53%), Gaps = 15/420 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S I+        L+   CLG+   +   ++S  L +VI ++     +  +    +++
Sbjct: 21  GILSRISGTLMEAQGLA--ACLGELCHIPSFRSSPVLAEVIDLHHQTTLLLALTPVHDLA 78

Query: 83  LGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R    P S    GRVI+  G P+DG+  L K  LS  + +  P  ++R  +
Sbjct: 79  LGTEVIPLRRPASLPLSNHLLGRVIDGFGNPLDGNPPLPKAPLS-PLFASPPAPISRTPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGIR ID    +  GQR+G+F+  G GKS+LLS  A+       +I+L+GERGRE
Sbjct: 138 QEVFPTGIRAIDALLTVGEGQRVGIFSEPGGGKSSLLSTIAKGAQNTINVIALIGERGRE 197

Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VR+++  +  G   ++++++ +T+ ++   + +A   A+TIAEYF  +G  VL I+DS++
Sbjct: 198 VRDYVHQHKEGLAAQRTIIIASTAYDTAASKVIAGRAAITIAEYFRDQGARVLFIMDSLS 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  S++E+A   GE      Y  SVF  +   LER G    +KG+IT+  ++L    NH
Sbjct: 258 RWIESLQEVALARGETLSTHHYAASVFHHVAAFLERAG--NNDKGSITSFYAML-HYANH 314

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTH 378
            D   D V+S+LDGH  L+    +E  +  PP++ L S+SR A +            L  
Sbjct: 315 PDIFNDYVKSLLDGHFFLS---PQEKSFSSPPINLLTSLSRSARQLAHPHHYAAAQELLS 371

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           L+  + E  DI  +G Y PG D  LD+A+  +P + +FL Q  S+ S+  D  +++ + L
Sbjct: 372 LLKAYHEAIDIIQLGAYVPGQDAKLDRAIRILPSLQEFLSQPLSNYSAIHDTIEQLCRLL 431


>gi|188534040|ref|YP_001907837.1| ATP synthase SpaL [Erwinia tasmaniensis Et1/99]
 gi|188029082|emb|CAO96950.1| Type III secretion apparatus [Erwinia tasmaniensis Et1/99]
          Length = 431

 Score =  202 bits (515), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 119/283 (42%), Positives = 164/283 (57%), Gaps = 3/283 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   TGIR ID       GQRIG+FA +G GK++L++M       D  +I L+GE
Sbjct: 131 RRPIAEPLITGIRAIDGLLTCGVGQRIGIFAAAGCGKTSLMNMLVTHCEADVYVIGLIGE 190

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R REV EF+E   L     K ++V ATSD S + R  A   A +IA YFS  G  VLL +
Sbjct: 191 RVREVTEFVESMKLSSRRAKVILVYATSDRSSVERTNAAQVASSIAGYFSELGKKVLLFI 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR+A ++R++A + GELP  RGYP SVF  LP+LLER  P     G+ITA  +VL++
Sbjct: 251 DSVTRYARALRDVALSMGELPARRGYPASVFESLPKLLER--PGCFITGSITAFYTVLIE 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +   D I D VRSILDGHI L+  LA +G YP +D L S+SR+       + ++L    
Sbjct: 309 NEEEADVIGDEVRSILDGHIYLSHKLAAKGHYPAIDILQSISRVFSSVTDDNHQQLAKVF 368

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             L+ R  E +    +G YR G ++  D A  +   I  FL+Q
Sbjct: 369 RSLLQRKSEMQLYIDLGEYRYGENVDNDIAFDKAGDIELFLRQ 411


>gi|16752181|ref|NP_445548.1| type III secretion system ATPase [Chlamydophila pneumoniae AR39]
 gi|7189925|gb|AAF38789.1| virulence ATPase, putative [Chlamydophila pneumoniae AR39]
          Length = 433

 Score =  202 bits (515), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 149/422 (35%), Positives = 218/422 (51%), Gaps = 21/422 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S ++     V  LS   CLG+   +   K+ + L +VI  +     +  +     ++
Sbjct: 21  GLLSKVSGNLIEVDGLS--ACLGELCKISSTKDPNLLAEVIGFHNHTTLLMSLSPLHSVA 78

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R   +  S    GRV++A G PID  + L K      ++S  P  M RQ +
Sbjct: 79  LGTEVLPLRRPPSLHLSDHLLGRVLDAFGNPIDKKEDLPKTH-RKPLLSLPPSPMMRQPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGI+ ID F  L  GQRIGVF+  G GKS+LLS  A        +I+L+GERGRE
Sbjct: 138 DQIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIALGSKSTINVIALIGERGRE 197

Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           VRE IE +  + LK  +++++ A + E+   + +A   A+TIAEYF  +G  VL I+DS+
Sbjct: 198 VREHIEKH-SNALKQQRTIIIAAPAHETAPTKVIAGRAAMTIAEYFREQGHEVLFIMDSL 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           +R+  +++E+A   GE   A  Y  SVF  +    ER G    +KG+ITA+ ++L     
Sbjct: 257 SRWIAALQEVALARGETLSAHQYAASVFHHVSEFTERAG--NNDKGSITALYAILY-YPK 313

Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           H D   D ++S+LDGH  L    ++LA     PP+D L+S+SR A              L
Sbjct: 314 HPDIFTDYLKSLLDGHFFLTSQGKALAS----PPIDILSSLSRSAQALALPHHYAAAERL 369

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  + E  DI  +G Y PG D  LDKAV  +P I  FL Q    LSS        K+
Sbjct: 370 RSLLKVYNEALDIIHLGAYTPGQDEELDKAVKLLPSIKAFLAQP---LSSYCYLDNTLKQ 426

Query: 437 LQ 438
           L+
Sbjct: 427 LE 428


>gi|313056267|dbj|BAJ39851.1| probable ATP synthase VscN2 [Vibrio mimicus]
          Length = 420

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 203/356 (57%), Gaps = 17/356 (4%)

Query: 91  GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140
           G+  I+P         +   G+VIN  G+ + GD  LG+ G+ + + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA Y+  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S +  G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K       +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           ++R+     +  +G Y  G  L  D+A+ + P I +FLKQ    +  E+  QE+ +
Sbjct: 360 VYRYFNVELLIRVGEYEKGNGLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415


>gi|12082754|gb|AAG48602.1|AF306649_3 SpaL/InvC [Sodalis glossinidius]
          Length = 437

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/285 (41%), Positives = 170/285 (59%), Gaps = 5/285 (1%)

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + +   T IR ID      HGQR+G+FA +G GK++L++M       D  ++ L+GE
Sbjct: 135 REPIAEKLITRIRAIDGLLTCGHGQRLGIFAAAGCGKTSLMNMLIEHSEADVYVVGLIGE 194

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+E       + K V+V ATSD + + R  A L A T+AEYF  +G  V+L L
Sbjct: 195 RGREVTEFVETLRHSPRRHKCVLVYATSDYASLERCNAALVATTVAEYFRDQGRRVVLFL 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA ++R++A  +GE P  RGYP SVF  LPR+LER  P     G+ITA  +VL++
Sbjct: 255 DSLTRFARALRDVALAAGEAPARRGYPASVFDALPRVLER--PGNSLSGSITAFYTVLLE 312

Query: 317 GDNHNDPIADSVRSIL--DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           GD+  DP A     +   DGHI L+R L+    YP +D L S SR+A +   A ++ L  
Sbjct: 313 GDDEPDPDAPDENPLRFSDGHIYLSRKLSAASHYPAIDILHSASRVAGQVTDARQQALAG 372

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           ++  L+ R EE + +  +G YR G +   D+A  Q   ++DFL+Q
Sbjct: 373 AMRGLLTRLEEMQTLIDLGEYRLGDNAENDRAHAQKQALWDFLRQ 417


>gi|262274286|ref|ZP_06052097.1| Type III secretion cytoplasmic ATP synthase [Grimontia hollisae CIP
           101886]
 gi|262220849|gb|EEY72163.1| Type III secretion cytoplasmic ATP synthase [Grimontia hollisae CIP
           101886]
          Length = 420

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 203/356 (57%), Gaps = 17/356 (4%)

Query: 91  GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140
           G+  I+P   C+        G+VIN  G+ + GD  L + G+ + + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNEEALVGKVINCYGESLYGDSYLEQPGEFIDLPIAVEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + +KKS+ +V+TS+ +P+ +  + L AV+IA Y+  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIKKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S +  G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIR--GSVTGIFTVLIEREI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K       +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQDKHYVRLSEKIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           ++R+     +  +G Y  G DL  D+A+   P I +FLKQ    +  E+  QE+ +
Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFEGVEYEETLQEMER 415


>gi|262361808|gb|ACY58529.1| flagellum-specific ATP synthase [Yersinia pestis D106004]
          Length = 247

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 108/233 (46%), Positives = 145/233 (62%), Gaps = 1/233 (0%)

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F  +G +VLLI
Sbjct: 3   ERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLI 62

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL 
Sbjct: 63  MDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLT 122

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+  DPIADS R+ILDGH+VL+R LAE G YP +D  AS+SR        D    V  
Sbjct: 123 EGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQ 182

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              L+  ++  RD+  +G Y  G D +LDKA+   P +  FL+Q   + SS D
Sbjct: 183 FKQLLASYQRNRDLISVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFD 235


>gi|229515150|ref|ZP_04404610.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae TMA
           21]
 gi|229529212|ref|ZP_04418602.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae
           12129(1)]
 gi|254224923|ref|ZP_04918538.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio
           cholerae V51]
 gi|254285295|ref|ZP_04960260.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio
           cholerae AM-19226]
 gi|71480607|gb|AAZ32229.1| VcsN2 [Vibrio cholerae non-O1/non-O139]
 gi|125622611|gb|EAZ50930.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio
           cholerae V51]
 gi|150424567|gb|EDN16503.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio
           cholerae AM-19226]
 gi|229332986|gb|EEN98472.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae
           12129(1)]
 gi|229347855|gb|EEO12814.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae TMA
           21]
          Length = 420

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 203/356 (57%), Gaps = 17/356 (4%)

Query: 91  GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140
           G+  I+P   C+        G+VIN  G+ + GD  L + G+ + + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNEEALVGKVINCYGETLYGDSYLEQPGEFIDLPIAVEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + +KKS+ +V+TS+ +P+ +  + L AV+IA ++  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIKKSITIVSTSEANPLEKVRSGLVAVSIARHYMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S K  G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIK--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K       +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKRYVRLSEKIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           ++R+     +  +G Y  G DL  D+A+   P I +FLKQ    +  E+  QE+ +
Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIELYPKIIEFLKQGFEGVEYEETLQEMER 415


>gi|15836391|ref|NP_300915.1| type III secretion system ATPase [Chlamydophila pneumoniae J138]
 gi|8979232|dbj|BAA99066.1| flagellum-specific ATP synthase [Chlamydophila pneumoniae J138]
          Length = 433

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 217/422 (51%), Gaps = 21/422 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S ++     V  LS   CLG+   +   K+ + L +VI  +     +  +     ++
Sbjct: 21  GLLSKVSGNLIEVDGLS--ACLGELCKISSTKDPNLLAEVIGFHNHTTLLMSLSPLHSVA 78

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V    R   +  S    GRV++A G PID  + L K      ++S  P  M RQ +
Sbjct: 79  LGTEVLPLRRPPSLHLSDHLLGRVLDAFGNPIDKKEDLPKTH-RKPLLSLPPSPMMRQPI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++ F TGI+ ID F  L  GQRIGVF+  G GKS+LLS  A        +I+L+GER RE
Sbjct: 138 DQIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIALGSKSTINVIALIGERRRE 197

Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           VRE IE +  + LK  +++++ A + E+   + +A   A+TIAEYF  +G  VL I+DS+
Sbjct: 198 VREHIEKH-SNALKQQRTIIIAAPAHETAPTKVIAGRAAMTIAEYFREQGHEVLFIMDSL 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           +R+  +++E+A   GE   A  Y  SVF  +    ER G    +KG+ITA+ ++L     
Sbjct: 257 SRWIAALQEVALARGETLSAHQYAASVFHHVSEFTERAG--NNDKGSITALYAILY-YPK 313

Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           H D   D ++S+LDGH  L    ++LA     PP+D L+S+SR A              L
Sbjct: 314 HPDIFTDYLKSLLDGHFFLTSQGKALAS----PPIDILSSLSRSAQALALPHHYAAAERL 369

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  + E  DI  +G Y PG D  LDKAV  +P I  FL Q    LSS        K+
Sbjct: 370 RSLLKVYNEALDIIHLGAYTPGQDEELDKAVKLLPSIKAFLAQP---LSSYCYLDNTLKQ 426

Query: 437 LQ 438
           L+
Sbjct: 427 LE 428


>gi|153212061|ref|ZP_01947878.1| probable ATP synthase YscN [Vibrio cholerae 1587]
 gi|153827956|ref|ZP_01980623.1| probable ATP synthase YscN [Vibrio cholerae 623-39]
 gi|124116857|gb|EAY35677.1| probable ATP synthase YscN [Vibrio cholerae 1587]
 gi|148876537|gb|EDL74672.1| probable ATP synthase YscN [Vibrio cholerae 623-39]
          Length = 420

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 199/355 (56%), Gaps = 23/355 (6%)

Query: 91  GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140
           G+  I+P   C+        G+VIN  G+ + G+  L + GD   + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGDYKDLPIALEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA YF  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGEL---PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           TRFA +        G L   P+  G P  V   L RL+E  G S    G++T + +VL++
Sbjct: 246 TRFARA-------QGMLDGTPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIE 296

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            +  +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K    +  +L   +
Sbjct: 297 KEIDDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERI 356

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
             ++HR+     +  +G Y  G DL  D+A+   P I DFLKQ    +  E+  +
Sbjct: 357 KDMVHRYFSVELLIRVGEYEKGNDLETDQAIELYPKIMDFLKQGFDGVEYEETLK 411


>gi|304412102|ref|ZP_07393712.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Shewanella baltica OS183]
 gi|307305997|ref|ZP_07585743.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Shewanella baltica BA175]
 gi|304349652|gb|EFM14060.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Shewanella baltica OS183]
 gi|306911490|gb|EFN41916.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Shewanella baltica BA175]
          Length = 420

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/336 (35%), Positives = 194/336 (57%), Gaps = 9/336 (2%)

Query: 103 GRVINALGKPIDGDDSLG-KGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           G+VIN  G+ + G+  LG +GD   + I+ K  P   R  ++  F T I++ID    +  
Sbjct: 86  GKVINCYGESLYGEQYLGCEGDYYDLPIIDKPIPLNIRAPIDTVFPTKIKIIDGLFTIGV 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           GQR+G+FA +G GK+T +S+ A +   D VI +++GER REV EF+E  +G   ++KS+ 
Sbjct: 146 GQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAREVVEFLEGEIGPAVIQKSIT 205

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +V+TS+ +P+ +  + L AV+IA ++ ++G  V+L  DS+TRFA   R  A   G  P+ 
Sbjct: 206 IVSTSEANPLEKVRSGLVAVSIARHYMAQGKKVVLYFDSLTRFA---RAQAMLDGT-PIE 261

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            G P  V   L RL+E  G S    G++T + +VL++ +   DPIA  V+S++DGH+V +
Sbjct: 262 GGIPIGVSLALSRLVENCGNSIH--GSVTGIFTVLIEKEIDEDPIAHEVKSLIDGHLVYS 319

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++A  GRYP +D L S SRL +K   +    L      +++R+     +  +G Y  G 
Sbjct: 320 TTIASTGRYPAIDVLKSKSRLQNKVQDSQYVSLSEKFKDMVYRYFNVELLIRVGEYEKGN 379

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           DL  D+A+ + P I +FLKQ    +  E+  Q + +
Sbjct: 380 DLATDEAIDRFPYIMEFLKQGYDGVEYEETLQAMDR 415


>gi|221271461|dbj|BAH15013.1| probable ATP synthase VscN2 [Vibrio parahaemolyticus]
          Length = 420

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 17/352 (4%)

Query: 91  GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140
           G+  I+P   C+        G+VIN  G+ + G+  L + G+   + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGNYKDLPIALEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+ F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IERVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA YF  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S    G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K    +  +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +HR+     +  +G Y  G DL  D+A+   P I +FLKQ    +  E+  +
Sbjct: 360 VHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLK 411


>gi|255521226|ref|ZP_05388463.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL J1-175]
          Length = 345

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 193/333 (57%), Gaps = 15/333 (4%)

Query: 17  KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           KN V  +Q G I ++    Y        V +GD V+  G+N   L +VI I  +   + P
Sbjct: 14  KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               ++++ GD V+    +  I       G+V+NA G  ++ +  + K    M +  + P
Sbjct: 70  FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127

Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           P  A +R  +    +TGI+ ID    +  GQ+IG+FAGSG+GKSTLL M AR+   D  +
Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I LVGERGREV++F+   LG D L+KSV+V ATSDES +++  A   A +IAE+F  +G 
Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G +  + G+IT +
Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            +VLVDGD+ N P+ D  R ILDGHIVL R LA
Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELA 337


>gi|260899864|ref|ZP_05908259.1| type III secretion ATP synthase HrcN [Vibrio parahaemolyticus
           AQ4037]
 gi|308107305|gb|EFO44845.1| type III secretion ATP synthase HrcN [Vibrio parahaemolyticus
           AQ4037]
          Length = 420

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 201/356 (56%), Gaps = 17/356 (4%)

Query: 91  GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140
           G+  I+P   C+        G+VIN  G+ + G+  L + G+   + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGNYKDLPIALEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA YF  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S    G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIHGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K    +  +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           +HR+     +  +G Y  G DL  D+A+   P I +FLKQ    +  E+  + + +
Sbjct: 360 VHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLKRMER 415


>gi|313056237|dbj|BAJ39836.1| probable ATP synthase VscN2 [Vibrio mimicus]
          Length = 420

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/352 (34%), Positives = 199/352 (56%), Gaps = 17/352 (4%)

Query: 91  GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140
           G+  I+P   C+        G+VIN  G+ + G+  L + G+   + I  +  P   R  
Sbjct: 66  GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGNYKDLPIALEPIPLQMRAP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER R
Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA YF  +G  V+L  DS+
Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA   R  A   G  P+  G P  V   L RL+E  G S    G++T + +VL++ + 
Sbjct: 246 TRFA---RAQAMLDG-TPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEKEI 299

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K    +  +L   +  +
Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIKDM 359

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +HR+     +  +G Y  G DL  D+A+   P I +FLKQ    +  E+  +
Sbjct: 360 VHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLK 411


>gi|285018279|ref|YP_003375990.1| xanthomonas secretion apparatus protein [Xanthomonas albilineans
           GPE PC73]
 gi|283473497|emb|CBA16000.1| probable xanthomonas secretion apparatus protein [Xanthomonas
           albilineans]
          Length = 449

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 169/294 (57%), Gaps = 3/294 (1%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P   +R    +   TGIR ID       GQR+G+FA +G GKS+LLSM       D  I+
Sbjct: 145 PRYTDRNPHAESLWTGIRAIDGLLTCAIGQRVGIFAAAGSGKSSLLSMLVGGIDADVAIV 204

Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EF+E          ++VV ATSD+S + R  A   A+  AE++  +G +
Sbjct: 205 ALIGERGREVSEFVEKMRHSQRADQLIVVYATSDQSAVERANAAKVAMAAAEFYRDRGMH 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V++ LDS+TR+A + R+IA  SGE+PV RGYP SVF  LP+L+ER G      G+ITA  
Sbjct: 265 VVVYLDSLTRYARAERDIALASGEVPVKRGYPLSVFDRLPKLIERAG--RIHVGSITAFY 322

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ +   D +AD  RS+LDGHI L+R LAE   YP +D L S SRL +      ++ 
Sbjct: 323 TVLLESEEEADMVADEFRSLLDGHIYLSRGLAETHHYPSIDVLKSASRLFNAVTDEQQQM 382

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           + ++    + R++E +    +G Y+ G +   D+ V     +  FL Q  S  S
Sbjct: 383 MAAAFRKQLARYQELQVYIDMGEYQRGTNAENDRIVDGYAQMRQFLIQDQSRWS 436


>gi|328469623|gb|EGF40559.1| putative ATPase YscN [Vibrio parahaemolyticus 10329]
          Length = 420

 Score =  196 bits (497), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 200/354 (56%), Gaps = 21/354 (5%)

Query: 91  GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK----GDLSMEIMSKVPPAMNR 138
           G+  I+P   C+        G+VIN  G+ + G+  L +     DL +  +  +P  M R
Sbjct: 66  GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGHYKDLPIA-LEPIPLQM-R 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
             +E  F T +++ID    +  GQR+G+FA +G GK+T +S+ A +   D VI +++GER
Sbjct: 124 APIETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGER 183

Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            REV EF+E  +G + ++KS+ +V+TS+ +P+ +  + L AV+IA YF  +G  V+L  D
Sbjct: 184 AREVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFD 243

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA   R  A   G  P+  G P  V   L RL+E  G S    G++T + +VL++ 
Sbjct: 244 SLTRFA---RAQAMLDG-TPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEK 297

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           +  +DPIA  V+S++DGH+V + ++A  GRYP +D L S SRL +K    +  +L   + 
Sbjct: 298 EIDDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIK 357

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
            ++HR+     +  +G Y  G DL  D+A+   P I +FLKQ    +  E+  +
Sbjct: 358 DMVHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLK 411


>gi|158834358|gb|ABW81978.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834360|gb|ABW81979.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834362|gb|ABW81980.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834364|gb|ABW81981.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834366|gb|ABW81982.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834370|gb|ABW81984.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834381|gb|ABW81986.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834389|gb|ABW81989.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
          Length = 237

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/226 (44%), Positives = 144/226 (63%), Gaps = 3/226 (1%)

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVV 219
           GQR+G+FA +G GK++L+ M       D  +I LVGERGREV EF E        +K +V
Sbjct: 12  GQRMGIFAAAGCGKTSLMHMLIEQADADVFVIGLVGERGREVTEFTEVLSKSGRAQKCIV 71

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A L A TIAEYF  +G  V+L LDSITR+A ++R++A  +GE P  
Sbjct: 72  VYATSDFSSLDRCNAALLATTIAEYFRDQGKKVVLFLDSITRYARALRDVALAAGEAPAR 131

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LP +LER  PS  + G+ITA  ++L++ D+  DPIA+ +RSILDGHI L+
Sbjct: 132 RGYPASVFDSLPSILER--PSNTKNGSITAFYTILLESDDEPDPIAEEIRSILDGHIYLS 189

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           + LA +  YP +D L S+SR++ +    +   +     +++ + +E
Sbjct: 190 KKLAIKNHYPAIDVLHSISRVSSQICDTNHLSMAGEFRNILAKIQE 235


>gi|158834356|gb|ABW81977.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834368|gb|ABW81983.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834372|gb|ABW81985.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834383|gb|ABW81987.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
 gi|158834385|gb|ABW81988.1| type III secretion system ATP synthase [Candidatus Hamiltonella
           defensa]
          Length = 237

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 100/226 (44%), Positives = 144/226 (63%), Gaps = 3/226 (1%)

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVV 219
           GQR+G+FA +G GK++L+ M       D  +I LVGERGREV EF E        +K +V
Sbjct: 12  GQRMGIFAAAGCGKTSLMHMLIEQADADVFVIGLVGERGREVTEFTEVLSKSGRAQKCIV 71

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V ATSD S + R  A L A TIAEYF  +G  V+L LDSITR+A ++R++A  +GE P  
Sbjct: 72  VYATSDFSSLDRCNAALLATTIAEYFRDQGKKVVLFLDSITRYARALRDVALAAGEAPAR 131

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP SVF  LP +LER  PS  + G+ITA  ++L++ D+  DPI++ +RSILDGHI L+
Sbjct: 132 RGYPASVFDSLPSILER--PSNTKNGSITAFYTILLESDDEPDPISEEIRSILDGHIYLS 189

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           + LA +  YP +D L S+SR++ +    +   +     +++ + +E
Sbjct: 190 KKLAIKNHYPAIDVLHSISRVSSQICDTNHLSMAGEFRNILAKIQE 235


>gi|315930203|gb|EFV09318.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           305]
          Length = 309

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 177/313 (56%), Gaps = 12/313 (3%)

Query: 4   NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59
           NLE L ++L ++   NL    G I+ I++    +  L   V  GD    V ++ +N + L
Sbjct: 2   NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  +
Sbjct: 57  AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+
Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
            M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A
Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G
Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295

Query: 299 PSEKEKGNITAVI 311
             E+ KG ITA +
Sbjct: 296 -KEEGKGTITAFL 307


>gi|15834715|ref|NP_296474.1| type III secretion system ATPase [Chlamydia muridarum Nigg]
 gi|270284881|ref|ZP_06194275.1| type III secretion system ATPase [Chlamydia muridarum Nigg]
 gi|270288909|ref|ZP_06195211.1| type III secretion system ATPase [Chlamydia muridarum Weiss]
 gi|7190124|gb|AAF38970.1| virulence ATPase, putative [Chlamydia muridarum Nigg]
          Length = 434

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/387 (34%), Positives = 206/387 (53%), Gaps = 10/387 (2%)

Query: 43  VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SAC 100
            CLG+   +   ++S  L +VI I+     +  +     +SLG  V    R    P S  
Sbjct: 38  ACLGELCQISLPRSSPILAEVIGIHNQTTLLLALTPIYSLSLGAEVVPLRRPASLPLSHH 97

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRVI+  G P+DG+  L K  LS          M+R  +++ F TGIR ID    +  
Sbjct: 98  LLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPS-PMSRTPIQEIFPTGIRAIDALLTIGE 156

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219
           GQR+G+F+  G GKS+LLS  A+       +I+L+GERGREVR+++  +  G   +++++
Sbjct: 157 GQRVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTII 216

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VV+T+ E+   + +A   A+TIAEYF  +G  VL I+DS++R+  S++E+A   GE    
Sbjct: 217 VVSTAHETAASKVIAGRAAITIAEYFRDQGARVLFIMDSLSRWIESLQEVALARGETLST 276

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             Y  SVF  +   LER G    +KG+IT+  ++L    NH D   D V+S+LDGH  L 
Sbjct: 277 HHYAASVFHHVSEFLERAG--NNDKGSITSFYAML-HYANHPDIFNDYVKSLLDGHFFL- 332

Query: 340 RSLAEEGRY-PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
            S  E+  + PP++ L S+SR A +            L  L+  + E  DI  +G Y  G
Sbjct: 333 -SPVEKSFFSPPINLLTSLSRSACQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSG 391

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425
            D  LD+A+  +P + +FL Q  S+ S
Sbjct: 392 QDAKLDRAIRLLPSLREFLSQPLSNYS 418


>gi|213621349|ref|ZP_03374132.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 265

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/253 (41%), Positives = 152/253 (60%), Gaps = 3/253 (1%)

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           L+ M       D  +I L+GERGREV EF++     + K K V+V ATSD   + R  A 
Sbjct: 2   LMHMLIEQTEADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAA 61

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A T+AEYF  +G  V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLE
Sbjct: 62  QLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLE 121

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R  P    +G+ITA  +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L 
Sbjct: 122 R--PGATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLK 179

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  +  +    +  S++  L+ R EE +    +G YRPG ++  D+A+     +  
Sbjct: 180 SVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKA 239

Query: 416 FLKQSPSDLSSED 428
           +L Q  +  SS D
Sbjct: 240 WLCQPVAQYSSFD 252


>gi|301631895|ref|XP_002945030.1| PREDICTED: flagellum-specific ATP synthase-like [Xenopus (Silurana)
           tropicalis]
          Length = 261

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/240 (42%), Positives = 152/240 (63%), Gaps = 1/240 (0%)

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR    D +++ L+GERGREV+EF+ED LG  +  ++VVV A +D  P+LR      A 
Sbjct: 1   MARYTQADVIVVGLIGERGREVKEFVEDILGAGDRSRAVVVAAPADAPPLLRMQGAAYAT 60

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE+F  +G +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G 
Sbjct: 61  AIAEHFRDQGRHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSGN 120

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE G +P +D   S SR
Sbjct: 121 GLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRALAETGHFPAIDIEQSASR 180

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     + +  ++      +  R++++RD+  +G Y  G D  +D+A+   P +  FL+Q
Sbjct: 181 VMHNVVTREHFEMARQFRAIYSRYQKSRDLVQVGAYMSGSDPQVDEAIRLQPAMAGFLQQ 240


>gi|289525761|emb|CBJ15242.1| flagellum-specific ATP synthase [Chlamydia trachomatis Sweden2]
 gi|296435334|gb|ADH17512.1| type III secretion system ATPase [Chlamydia trachomatis E/150]
 gi|296439051|gb|ADH21204.1| type III secretion system ATPase [Chlamydia trachomatis E/11023]
          Length = 434

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 180/326 (55%), Gaps = 10/326 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G P+DG   L K +LS    S     M+R  +++ F TGIR ID    +  GQ
Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+F+  G GKS+LLS  A+       +I+L+GERGREVR+++  +  G   +++V++ 
Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +T+ E+   + +A   A+TIAEYF  +G +VL  +DS++R+  S++E+A   GE      
Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGAHVLFTMDSLSRWIESLQEVAIARGETLSTHH 278

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF  +   LER G    +KG+IT+  ++L    NH D   D V+S+LDGH  L+  
Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333

Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +E  +  PP++ L S+SR + +            L  L+  + E  DI  +G Y  G 
Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLS 425
           D  LD+A+  +P +  FL Q  S  S
Sbjct: 393 DAHLDRAIRLLPAVKQFLSQPYSHYS 418


>gi|166154059|ref|YP_001654177.1| type III secretion system ATPase [Chlamydia trachomatis 434/Bu]
 gi|166154934|ref|YP_001653189.1| type III secretion system ATPase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335261|ref|ZP_07223505.1| type III secretion system ATPase [Chlamydia trachomatis L2tet1]
 gi|165930047|emb|CAP03530.1| flagellum-specific ATP synthase [Chlamydia trachomatis 434/Bu]
 gi|165930922|emb|CAP06484.1| flagellum-specific ATP synthase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 434

 Score =  182 bits (462), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 180/327 (55%), Gaps = 10/327 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G P+DG   L K +LS    S     M+R  +++ F TGIR ID    +  GQ
Sbjct: 100 GRVLDGFGNPLDGGSQLPKTNLSPLFSSPSS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+F+  G GKS+LLS  A+       +I+L+GERGREVR+++  +  G   +++V++ 
Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +T+ E+   + +A   A+TIAEYF  +G  VL  +DS++R+  S++E+A   GE      
Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHH 278

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF  +   LER G    +KG+IT+  ++L    NH D   D V+S+LDGH  L+  
Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333

Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +E  +  PP++ L S+SR + +            L  L+  + E  DI  +G Y  G 
Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D  LD+A+  +P +  FL Q  S  S+
Sbjct: 393 DAHLDRAIRLLPSVKQFLSQPYSHYSA 419


>gi|255349110|ref|ZP_05381117.1| type III secretion system ATPase [Chlamydia trachomatis 70]
 gi|255503647|ref|ZP_05382037.1| type III secretion system ATPase [Chlamydia trachomatis 70s]
 gi|255507326|ref|ZP_05382965.1| type III secretion system ATPase [Chlamydia trachomatis D(s)2923]
          Length = 434

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 180/326 (55%), Gaps = 10/326 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G P+DG   L K +LS    S     M+R  +++ F TGIR ID    +  GQ
Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+F+  G GKS+LLS  A+       +I+L+GERGREVR+++  +  G   +++V++ 
Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +T+ E+   + +A   A+TIAEYF  +G +VL  +DS++R+  S++E+A   GE      
Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGAHVLFTMDSLSRWIESLQEVAIARGETLSTHH 278

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF  +   LER G    +KG+IT+  ++L    NH D   D V+S+LDGH  L+  
Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333

Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +E  +  PP++ L S+SR + +            L  L+  + E  DI  +G Y  G 
Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLS 425
           D  LD+A+  +P +  FL Q  S  S
Sbjct: 393 DAHLDRAIRLLPSVKQFLSQPYSHYS 418


>gi|15605450|ref|NP_220236.1| type III secretion system ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789457|ref|YP_328543.1| type III secretion system ATPase [Chlamydia trachomatis A/HAR-13]
 gi|237805068|ref|YP_002889222.1| type III secretion system ATPase [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|255311547|ref|ZP_05354117.1| type III secretion system ATPase [Chlamydia trachomatis 6276]
 gi|255317848|ref|ZP_05359094.1| type III secretion system ATPase [Chlamydia trachomatis 6276s]
 gi|3329173|gb|AAC68312.1| Flagellum-specific ATP Synthase [Chlamydia trachomatis D/UW-3/CX]
 gi|76167987|gb|AAX50995.1| flagellum-specific ATP synthase [Chlamydia trachomatis A/HAR-13]
 gi|231273368|emb|CAX10283.1| flagellum-specific ATP synthase [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|296436262|gb|ADH18436.1| type III secretion system ATPase [Chlamydia trachomatis G/9768]
 gi|296437191|gb|ADH19361.1| type III secretion system ATPase [Chlamydia trachomatis G/11222]
 gi|296438122|gb|ADH20283.1| type III secretion system ATPase [Chlamydia trachomatis G/11074]
 gi|297140623|gb|ADH97381.1| type III secretion system ATPase [Chlamydia trachomatis G/9301]
 gi|297748848|gb|ADI51394.1| Flagellum-specific ATP synthase [Chlamydia trachomatis D-EC]
 gi|297749728|gb|ADI52406.1| Flagellum-specific ATP synthase [Chlamydia trachomatis D-LC]
          Length = 434

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 180/327 (55%), Gaps = 10/327 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G P+DG   L K +LS    S     M+R  +++ F TGIR ID    +  GQ
Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+F+  G GKS+LLS  A+       +I+L+GERGREVR+++  +  G   +++V++ 
Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +T+ E+   + +A   A+TIAEYF  +G  VL  +DS++R+  S++E+A   GE      
Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHH 278

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF  +   LER G    +KG+IT+  ++L    NH D   D V+S+LDGH  L+  
Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333

Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +E  +  PP++ L S+SR + +            L  L+  + E  DI  +G Y  G 
Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D  LD+A+  +P +  FL Q  S  S+
Sbjct: 393 DAHLDRAIRLLPSVKQFLSQPYSHYSA 419


>gi|218506624|ref|ZP_03504502.1| type III secretion system ATP synthase protein [Rhizobium etli
           Brasil 5]
          Length = 260

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/231 (42%), Positives = 145/231 (62%), Gaps = 3/231 (1%)

Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSV-VVVATSDESPILRKMAPLTAVTIAEYFS 246
           D ++ +LVGERGREV EF+   + + +  +V +VVATSD   + R  A +TA  IAEYF 
Sbjct: 10  DVIVCALVGERGREVGEFVAGNMPEGVPSNVALVVATSDRPALERFKAVMTATAIAEYFR 69

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL++DS+TR A ++RE+   +GE PV RG+P SVF+ LP++ ER G S    G 
Sbjct: 70  EQGKHVLLVIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNS--ANGM 127

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA  +VLV+G+  +DPIA+  RS+LDGHIVL+  +A  G +P +D LAS SR      S
Sbjct: 128 MTAFYTVLVEGEEQDDPIAEETRSLLDGHIVLSDKIARAGNFPAIDVLASRSRTMSAVVS 187

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
              ++    L  L+  ++E   +  +G YR G D  +D+AV +  +I  FL
Sbjct: 188 ESHRQAADRLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFL 238


>gi|237803147|ref|YP_002888341.1| type III secretion system ATPase [Chlamydia trachomatis
           B/Jali20/OT]
 gi|231274381|emb|CAX11176.1| flagellum-specific ATP synthase [Chlamydia trachomatis B/Jali20/OT]
          Length = 434

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 179/327 (54%), Gaps = 10/327 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++  G P+DG   L K +LS    S     M+R  +++ F TGIR ID    +  GQ
Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221
           R+G+F+  G GKS+LLS  A+       +I+L+GERGREVR+++  +  G   +++V++ 
Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +T+ E+   + +A   A+TIAEYF  +G  VL  +DS++R+  S++E+A   GE      
Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHH 278

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  SVF  +   LER G    +KG+IT+  ++L    NH D   D V+S+LDGH  L+  
Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333

Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +E  +  PP++ L S+SR + +            L  L+  + E  DI  +G Y  G 
Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D  LD+A+  +  +  FL Q  S  S+
Sbjct: 393 DAHLDRAIRLLSSVKQFLSQPYSHYSA 419


>gi|330443919|ref|YP_004376905.1| flagellum-specific ATP synthase [Chlamydophila pecorum E58]
 gi|328807029|gb|AEB41202.1| flagellum-specific ATP synthase [Chlamydophila pecorum E58]
          Length = 433

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/391 (35%), Positives = 209/391 (53%), Gaps = 10/391 (2%)

Query: 43  VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSAC 100
            CLG+   +   ++S+ L +VI  +     +  +     ++LG  V    R   +  S  
Sbjct: 38  ACLGELCKISSTQSSELLAEVIGFHNQTTLLMSLSPLYGVALGTEVLPLRRPPSLHLSDH 97

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV++ LG PID    L K      ++S  PP M R+ + + F TGI+ ID    L  
Sbjct: 98  LLGRVLDGLGNPIDNQKDLPKTH-RKPLISPPPPPMTRKPIHEVFPTGIKAIDACLTLGK 156

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK--SV 218
           GQRIGVF+  G GKS+LLS  A        +I+L+GERGREVRE+IE +  + LKK  +V
Sbjct: 157 GQRIGVFSEPGSGKSSLLSSIALGSKSTINVIALIGERGREVREYIERH-KEALKKHQTV 215

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V A + E+  ++ +A   A+TIAE+F  +G +VL I+DS++R+  +++E+A   GE   
Sbjct: 216 IVTAPAHETAPIKIIAGRVAMTIAEFFREQGHDVLFIMDSLSRWISALQEVALARGETLS 275

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           +  Y  SVF  +    ER G S  ++G+ITA++++L   D H D   D ++S+LDGH  L
Sbjct: 276 SHHYAASVFHHVSEFTERSGNS--DQGSITALLAILHYPD-HPDVFTDYLKSLLDGHFFL 332

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +         PP+D L+S+SR A              L  L+  + E  DI  +G Y PG
Sbjct: 333 SNQ-GHAFTSPPIDILSSLSRSAQSLSLPHHYAAAEKLRSLLKVYNEALDIIRLGAYTPG 391

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            D  LD+A+  +P I  FL Q  ++  + D 
Sbjct: 392 QDKDLDEAMKLIPSIQAFLSQPLTNYCNFDT 422


>gi|301382894|ref|ZP_07231312.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato
           Max13]
          Length = 215

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 89/191 (46%), Positives = 121/191 (63%)

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           +R  A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ 
Sbjct: 1   MRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAR 60

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP+L+ER G +EK  G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP
Sbjct: 61  LPKLVERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYP 120

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D  AS+SR+     S +          L  R+++TRD+  +G Y  G D   D A+  
Sbjct: 121 AIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIAL 180

Query: 410 VPIIYDFLKQS 420
            P++  + +Q+
Sbjct: 181 HPVLVRYQRQA 191


>gi|257487959|ref|ZP_05642000.1| type III secretion component, putative [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 221

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/208 (47%), Positives = 128/208 (61%), Gaps = 2/208 (0%)

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
            VVATSD     R  A   A T+AEY   +G NVLL++DS+TRFA + REI    GE P 
Sbjct: 3   AVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPT 62

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP S FS LPRLLER GP  +  G+ITA+ +VL +GD   DP+A+  RSILDGHIVL
Sbjct: 63  RRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGDAAMDPVAEETRSILDGHIVL 120

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +  LA+   +P +D L S SRL D   +A+ ++L S L  LI R +E   +  +G Y  G
Sbjct: 121 SAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRELIARRQEIELLIQVGEYAAG 180

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            D I D+A+ +   I  FL+Q PS+  S
Sbjct: 181 SDPIADEAIARHSPIEAFLRQPPSEHDS 208


>gi|313624679|gb|EFR94637.1| flagellum-specific ATP synthase [Listeria innocua FSL J1-023]
          Length = 268

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/270 (41%), Positives = 158/270 (58%), Gaps = 9/270 (3%)

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           SG+GKSTLL M AR+   D  II LVGERGREV++F+   LG+  L+KSV+V ATSDES 
Sbjct: 1   SGVGKSTLLGMIARNAKADINIIGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESH 60

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +++  A   A +IAE+F  +G  VLL++DS+TRFA + R +     +LP+  G    + S
Sbjct: 61  LMQLRAAKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMES 119

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            + +LLER G ++   G+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA +  Y
Sbjct: 120 YMKKLLERSGKTKN--GSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHY 177

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAV 407
           P +D L SVSR+ ++     + K  S +   +  ++E      +G      D   +  + 
Sbjct: 178 PAIDVLGSVSRVMEEIVPESQWKSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSK 237

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +   I+ FLKQ    L  E V  E T K+
Sbjct: 238 EKSYFIHQFLKQ----LRDESVTLEETSKM 263


>gi|295110896|emb|CBL27646.1| ATPase FliI/YscN family [Synergistetes bacterium SGP1]
          Length = 325

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/233 (45%), Positives = 137/233 (58%), Gaps = 3/233 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    D V + P+G  +E+  G D+V       +       GRV++ LG+PID    +
Sbjct: 68  EVVGFREDRVLLMPLGNLQEVGPGCDVVSTNRPLEVPVGPALLGRVLDGLGQPIDDRGPV 127

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +  P  + RQ V++    G+RVID    L  GQRIG+FAGSG+GKSTLL 
Sbjct: 128 IAKDF-YPLHAMPPHPLKRQMVDRPLSVGVRVIDGMLTLGMGQRIGIFAGSGVGKSTLLG 186

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +ISLVGERGREVREFIE  LG +   +SV+VVATSD+ P++R  A +TA
Sbjct: 187 MMARYTTADVNVISLVGERGREVREFIERDLGPEGAARSVLVVATSDQPPLIRLKAAMTA 246

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             IAEYF   G NVLL++DS+TR A + REI    GE P  RGY     S  P
Sbjct: 247 TAIAEYFRDAGRNVLLMMDSVTRVARAQREIGLAIGEPPATRGYTPPCSSCCP 299


>gi|300853451|ref|YP_003778435.1| F1Fo ATPase subunit beta [Clostridium ljungdahlii DSM 13528]
 gi|300433566|gb|ADK13333.1| F1Fo ATPase, subunit beta [Clostridium ljungdahlii DSM 13528]
          Length = 464

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 168/298 (56%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID +  + K +    I  + P   ++    + F+TGI+VID+  P   G
Sbjct: 86  LGRLFNMLGQPIDENGEV-KAEQYYPIHRQAPSFEDQSVKPEMFETGIKVIDLLAPYQRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      +KK+
Sbjct: 145 GKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMQESGVIKKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  KG +VLL +D+I RF  +  E++   G +P
Sbjct: 205 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALLGRIP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPSTTFTHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS++E G YP VDPLAS SR+ D +    D  K+ S + H++ R+ E +DI  I G
Sbjct: 323 LSRSISEIGIYPAVDPLASTSRILDPRIVGEDHYKVASDVKHILERYSELQDIIAILG 380


>gi|217966570|ref|YP_002352076.1| ATP synthase F1 subunit beta [Dictyoglomus turgidum DSM 6724]
 gi|226740191|sp|B8DYT0|ATPB_DICTD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|217335669|gb|ACK41462.1| ATP synthase F1, beta subunit [Dictyoglomus turgidum DSM 6724]
          Length = 465

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/297 (37%), Positives = 173/297 (58%), Gaps = 16/297 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF---KTGIRVIDIFTPL 158
            GRV+N  G+PIDG D + KG+++  I +    A+  +RVE  +   +TGI+ ID+ TP 
Sbjct: 85  LGRVVNVFGEPIDGGDKI-KGEMTPIIKN----AVEFRRVEPSYSILETGIKAIDLLTPF 139

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +       IS+   +GER RE  E ++E      L
Sbjct: 140 PQGGKIGLFGGAGVGKTVLIMELIHNVAVAHGGISVFAGIGERSREGNELWLEMKESGVL 199

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
            K+V+V    +E P +R   PLTA+TIAEYF    G +VLL++D+I R+  +  E+++  
Sbjct: 200 SKAVLVFGQMNEPPGVRMRVPLTALTIAEYFRDYLGKDVLLLMDNIFRYVQAGMEVSSML 259

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +EL  + ERI     + G+ITAV +V V  D+  DP   ++ S LD
Sbjct: 260 GRIPSAVGYQPTLITELGEVEERI--LSTDTGSITAVQAVYVPADDLTDPAPATIFSHLD 317

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             +VL+RS+AE G YP VDPLAS S++ +  +   E   V+  +  ++  +E  +DI
Sbjct: 318 STLVLSRSIAEMGIYPAVDPLASSSQILEPKFVGYEHAEVARKVVEILQHYESLKDI 374


>gi|238924167|ref|YP_002937683.1| flagellar protein export ATPase FliI [Eubacterium rectale ATCC
           33656]
 gi|238875842|gb|ACR75549.1| flagellar protein export ATPase FliI [Eubacterium rectale ATCC
           33656]
          Length = 373

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/219 (41%), Positives = 133/219 (60%), Gaps = 4/219 (1%)

Query: 203 REFIEDYLGDNLKK--SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           RE I D L   +K    ++ V       I        +  IAEYF  KG++VLL++DS+T
Sbjct: 137 REIISDVLPLGVKAVDGLITVGKGQRIGIFAGSGVGKSTLIAEYFRDKGEDVLLMMDSLT 196

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF+ + REI   SGE PV RGYP SV+SE+P+LLER G ++K  G+IT + +VLVDGD+ 
Sbjct: 197 RFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGRADK--GSITGLYTVLVDGDDF 254

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           N+PI D+ RSILDGHI+L+R L  +  YP +D L S+SR+     + + K L   L +++
Sbjct: 255 NEPITDTARSILDGHIMLDRKLGHKNHYPAIDVLQSISRVMSAIATKEHKNLAGRLKNVL 314

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             + E  D+  IG Y+ G +  +D A+ ++  +  FL Q
Sbjct: 315 ATYTEAEDLINIGAYKNGSNQDIDYAIQKIGAVNSFLCQ 353


>gi|18311169|ref|NP_563103.1| F0F1 ATP synthase subunit beta [Clostridium perfringens str. 13]
 gi|110800751|ref|YP_696866.1| F0F1 ATP synthase subunit beta [Clostridium perfringens ATCC 13124]
 gi|168205576|ref|ZP_02631581.1| ATP synthase F1, beta subunit [Clostridium perfringens E str.
           JGS1987]
 gi|168210117|ref|ZP_02635742.1| ATP synthase F1, beta subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|168213709|ref|ZP_02639334.1| ATP synthase F1, beta subunit [Clostridium perfringens CPE str.
           F4969]
 gi|168215816|ref|ZP_02641441.1| ATP synthase F1, beta subunit [Clostridium perfringens NCTC 8239]
 gi|169344156|ref|ZP_02865138.1| ATP synthase F1, beta subunit [Clostridium perfringens C str.
           JGS1495]
 gi|182623961|ref|ZP_02951749.1| ATP synthase F1, beta subunit [Clostridium perfringens D str.
           JGS1721]
 gi|20137355|sp|Q8XID4|ATPB_CLOPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123148561|sp|Q0TNC4|ATPB_CLOP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|18145852|dbj|BAB81893.1| ATP synthase beta subunit [Clostridium perfringens str. 13]
 gi|110675398|gb|ABG84385.1| ATP synthase F1, beta subunit [Clostridium perfringens ATCC 13124]
 gi|169297614|gb|EDS79714.1| ATP synthase F1, beta subunit [Clostridium perfringens C str.
           JGS1495]
 gi|170662906|gb|EDT15589.1| ATP synthase F1, beta subunit [Clostridium perfringens E str.
           JGS1987]
 gi|170711767|gb|EDT23949.1| ATP synthase F1, beta subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|170714819|gb|EDT27001.1| ATP synthase F1, beta subunit [Clostridium perfringens CPE str.
           F4969]
 gi|177910854|gb|EDT73208.1| ATP synthase F1, beta subunit [Clostridium perfringens D str.
           JGS1721]
 gi|182382316|gb|EDT79795.1| ATP synthase F1, beta subunit [Clostridium perfringens NCTC 8239]
          Length = 465

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 164/300 (54%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           C  GR+ N LGKP+D    +   +    I    P    +  V + F+TGI+VID+  P  
Sbjct: 86  CVLGRIFNVLGKPLDSGAEVNNEE-KYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQ 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + +    +K
Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMMESGVIK 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            + +V    +E P  R    LT +T+AEYF  +G +VLL +D+I RF+ +  E++   G 
Sbjct: 205 NTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 265 IPSAVGYQPTLATEMGALQERI--TSTTHGSITSVQAVYVPADDLTDPAPATTFNHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+RS+AE G YP VDPL S SR+ D     +E  ++ S + H++ R++E +DI  I G
Sbjct: 323 TVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVASKVKHILERYKELQDIIAILG 382


>gi|110801467|ref|YP_699462.1| F0F1 ATP synthase subunit beta [Clostridium perfringens SM101]
 gi|122956535|sp|Q0SQZ5|ATPB_CLOPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110681968|gb|ABG85338.1| ATP synthase F1, beta subunit [Clostridium perfringens SM101]
          Length = 465

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 164/300 (54%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           C  GR+ N LGKP+D    +   +    I    P    +  V + F+TGI+VID+  P  
Sbjct: 86  CVLGRIFNVLGKPLDSGAEVNNEE-KYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQ 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + +    +K
Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMMESGVIK 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            + +V    +E P  R    LT +T+AEYF  +G +VLL +D+I RF+ +  E++   G 
Sbjct: 205 NTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 265 IPSAVGYQPTLATEMGALQERI--TSTTHGSITSVQAVYVPADDLTDPAPATTFNHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+RS+AE G YP VDPL S SR+ D     +E  ++ S + H++ R++E +DI  I G
Sbjct: 323 TVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVASKVKHILERYKELQDIIAILG 382


>gi|163848585|ref|YP_001636629.1| F0F1 ATP synthase subunit beta [Chloroflexus aurantiacus J-10-fl]
 gi|222526520|ref|YP_002570991.1| F0F1 ATP synthase subunit beta [Chloroflexus sp. Y-400-fl]
 gi|190358278|sp|A9WGS4|ATPB_CHLAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808139|sp|B9LBM0|ATPB_CHLSY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|163669874|gb|ABY36240.1| ATP synthase F1, beta subunit [Chloroflexus aurantiacus J-10-fl]
 gi|222450399|gb|ACM54665.1| ATP synthase F1, beta subunit [Chloroflexus sp. Y-400-fl]
          Length = 471

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 169/307 (55%), Gaps = 15/307 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GRV N LG PIDG   +G  ++    + + PP+   Q  +   F+TGI+VID+  P 
Sbjct: 85  ATLGRVFNVLGDPIDGMGPIGP-EVERRPIHRDPPSFEEQNTQAQIFETGIKVIDLIAPF 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLG 211
             G +  +F G+G+GK+ ++     +   ++   S+   VGER RE    + E  E  + 
Sbjct: 144 TRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVGERSREGNDLIHEMKEARID 203

Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           +N     K+V+V    +E P  R    LTA+T+AEYF  +G ++LL +D+I RF  +  E
Sbjct: 204 ENTTVFDKTVMVFGQMNEPPGARLRVGLTALTMAEYFRDEGRDILLFIDNIFRFVQAGSE 263

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +++  G +P   GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D++ DP   +V
Sbjct: 264 VSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITSMQAVYVPADDYTDPAPATV 321

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            S LD  I L RS+AE   +P VDPLAS SR+ D     +E  ++   +  ++ R+++ +
Sbjct: 322 FSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIVGEEHYRVAQEVKRVLQRYKDLK 381

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 382 DIIAILG 388


>gi|219847906|ref|YP_002462339.1| F0F1 ATP synthase subunit beta [Chloroflexus aggregans DSM 9485]
 gi|254808138|sp|B8G6G6|ATPB_CHLAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219542165|gb|ACL23903.1| ATP synthase F1, beta subunit [Chloroflexus aggregans DSM 9485]
          Length = 471

 Score =  166 bits (421), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 15/307 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GRV N LG PIDG    G  ++    + + PP+   Q  +   F+TGI+VID+  P 
Sbjct: 85  ATLGRVFNVLGDPIDGGPPFGP-EVERRPIHRDPPSFEEQSTQAQIFETGIKVIDLIAPF 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLG 211
             G +  +F G+G+GK+ ++     +   ++   S+   VGER RE    + E  E  + 
Sbjct: 144 TRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVGERSREGNDLIHEMREARID 203

Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           +N     K+++V    +E P  R    LTA+T+AEYF  +G ++LL +D+I RF  +  E
Sbjct: 204 ENTTVFDKTIMVFGQMNEPPGARLRVGLTALTMAEYFRDQGRDILLFIDNIFRFVQAGSE 263

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +++  G +P   GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D++ DP   +V
Sbjct: 264 VSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITSMQAVYVPADDYTDPAPATV 321

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            S LD  I L RS+AE   +P VDPLAS SR+ D     +E  ++   +  ++ R+++ +
Sbjct: 322 FSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIVGEEHYRVAQEVKRVLQRYKDLK 381

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 382 DIIAILG 388


>gi|116629873|ref|YP_815045.1| F0F1 ATP synthase subunit beta [Lactobacillus gasseri ATCC 33323]
 gi|238853684|ref|ZP_04644052.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 202-4]
 gi|282851612|ref|ZP_06260977.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 224-1]
 gi|311110490|ref|ZP_07711887.1| ATP synthase F1, beta subunit [Lactobacillus gasseri MV-22]
 gi|122273189|sp|Q042L5|ATPB_LACGA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116095455|gb|ABJ60607.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus gasseri ATCC
           33323]
 gi|238833722|gb|EEQ25991.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 202-4]
 gi|282557580|gb|EFB63177.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 224-1]
 gi|311065644|gb|EFQ45984.1| ATP synthase F1, beta subunit [Lactobacillus gasseri MV-22]
          Length = 480

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHYQVAVQVQHILQRYQELQDI 378


>gi|148654681|ref|YP_001274886.1| F0F1 ATP synthase subunit beta [Roseiflexus sp. RS-1]
 gi|166222410|sp|A5UQN3|ATPB_ROSS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148566791|gb|ABQ88936.1| ATP synthase F1, beta subunit [Roseiflexus sp. RS-1]
          Length = 471

 Score =  166 bits (419), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 169/305 (55%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV + LG PIDG+  +   +     + + PPA+  Q      F+TGI+VID+  P   
Sbjct: 88  LGRVFDVLGDPIDGEGPVQATEYRP--IHRPPPALEDQSTTAQIFETGIKVIDLIAPFTR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGDN 213
           G + G+F G+G+GK+ ++     +   ++   S+   VGER RE    + E  E  + + 
Sbjct: 146 GGKTGIFGGAGVGKTVVIQELIANVAKEQSGFSVFAGVGERSREGNDLIHEMKEARIDEQ 205

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            +   K+V+V    +E P  R    LTA+T+AEYF  +G +VLL +D+I RF  +  E++
Sbjct: 206 TRVFDKTVMVFGQMNEPPGARLRVALTAMTMAEYFRDEGRDVLLFIDNIFRFVQAGSEVS 265

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P   GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D++ DP   +V S
Sbjct: 266 ALLGRMPSQVGYQPTLGTEMGELQERI--TSTKKGSITSMQAVYVPADDYTDPAPATVFS 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  I L RS+A +G YP VDPLAS SR+ D     A+  ++   +  ++ R+++ +DI
Sbjct: 324 HLDATITLERSIAAKGIYPAVDPLASTSRILDPNIVGAEHYRVAREVQRVLQRYKDLQDI 383

Query: 390 RLIGG 394
             I G
Sbjct: 384 IAILG 388


>gi|300361422|ref|ZP_07057599.1| ATP synthase F1 sector beta subunit [Lactobacillus gasseri JV-V03]
 gi|300354041|gb|EFJ69912.1| ATP synthase F1 sector beta subunit [Lactobacillus gasseri JV-V03]
          Length = 480

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVAVQVQHILQRYQELQDI 378


>gi|42518865|ref|NP_964795.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii NCC 533]
 gi|81832255|sp|Q74K15|ATPB_LACJO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|41583151|gb|AAS08761.1| ATP synthase beta chain [Lactobacillus johnsonii NCC 533]
          Length = 480

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378


>gi|227889723|ref|ZP_04007528.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii ATCC 33200]
 gi|227849587|gb|EEJ59673.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii ATCC 33200]
          Length = 480

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378


>gi|268319739|ref|YP_003293395.1| ATP synthase F1, beta subunit [Lactobacillus johnsonii FI9785]
 gi|262398114|emb|CAX67128.1| ATP synthase F1, beta subunit [Lactobacillus johnsonii FI9785]
          Length = 480

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378


>gi|329667588|gb|AEB93536.1| ATP synthase beta chain [Lactobacillus johnsonii DPC 6026]
          Length = 480

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378


>gi|156741251|ref|YP_001431380.1| F0F1 ATP synthase subunit beta [Roseiflexus castenholzii DSM 13941]
 gi|190358702|sp|A7NIQ9|ATPB_ROSCS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|156232579|gb|ABU57362.1| ATP synthase F1, beta subunit [Roseiflexus castenholzii DSM 13941]
          Length = 471

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV + LG PIDG+  +   +     + + PPA+  Q      F+TGI+VID+  P   
Sbjct: 88  LGRVFDVLGDPIDGEGPVQTTEYRP--IHRPPPALEDQSTTAQIFETGIKVIDLIAPFTR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE----VREFIEDYLGDN 213
           G + G+F G+G+GK+ ++     +   ++    + + VGER RE    + E  E  + + 
Sbjct: 146 GGKTGIFGGAGVGKTVIIQELIANVAKEQSGYSVFAGVGERSREGNDLIHEMKEARIDEK 205

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            +   K+V+V    +E P  R    LTA+T+AEYF  +G +VLL +D+I RF  +  E++
Sbjct: 206 TRVFDKTVMVFGQMNEPPGARLRVGLTAMTMAEYFRDEGRDVLLFIDNIFRFVQAGSEVS 265

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P   GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D++ DP   +V S
Sbjct: 266 ALLGRMPSQVGYQPTLGTEMGELQERI--TSTKKGSITSMQAVYVPADDYTDPAPATVFS 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  I L RS+A +G YP VDPLAS SR+ D     +E  ++   +  ++ R+++ +DI
Sbjct: 324 HLDATITLERSIAAKGIYPAVDPLASTSRILDPNIVGEEHYRVAREVQRVLQRYKDLQDI 383

Query: 390 RLIGG 394
             I G
Sbjct: 384 IAILG 388


>gi|297621354|ref|YP_003709491.1| F-type ATP synthase, subunit beta [Waddlia chondrophila WSU
           86-1044]
 gi|297376655|gb|ADI38485.1| F-type ATP synthase, subunit beta [Waddlia chondrophila WSU
           86-1044]
          Length = 465

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 166/300 (55%), Gaps = 12/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N LGKPID  DS+      M I  + PP++ +Q   E  ++TGI+VID+  P   G
Sbjct: 89  GRIFNILGKPIDNLDSISPKTPHMPI-HRAPPSLEQQETKEIVYETGIKVIDLLAPFLKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GKS ++     +         +   VGER RE  + ++E      L K+
Sbjct: 148 GKVGLFGGAGVGKSVIVMELIHNIATQHGGYSVFCGVGERTREGNDLWLEMKESGVLDKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +
Sbjct: 208 CLVFGQMNEPPGARLRVGLTGLTMAEYFRDKEHQDVLLFVDNIFRFVQAGSEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+    ERI  +  + G+IT+V +V V  D++ DP   S+ S  D  I
Sbjct: 268 PSAVGYQPTLSAEIGAFEERI--TSTQTGSITSVQAVYVPADDYTDPAPASLFSHFDASI 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEETRDIRLIGG 394
            L+R +AE G YP VDPLAS SR+ D AW+  E+   L   +  ++ R+++ +DI  I G
Sbjct: 326 TLSRQIAELGIYPAVDPLASSSRILD-AWTVGEQHYDLACKVQKILQRYKDLQDIIAILG 384


>gi|300898049|ref|ZP_07116419.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Escherichia coli MS 198-1]
 gi|300358247|gb|EFJ74117.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Escherichia coli MS 198-1]
          Length = 223

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 129/215 (60%), Gaps = 4/215 (1%)

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +DESP++R  A     +IA +F  +G +VLL++DS+TR+A + REIA + GE P  +GYP
Sbjct: 2   ADESPLMRLKATELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYP 61

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            S F  +P+L+E  G SE   G++TA+ +VL +GD+  DPI D  R++LDGHIVL R LA
Sbjct: 62  PSAFGMIPKLVESAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLA 120

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E G YP +D   S+SR  ++  S D ++   +L      + E + +  +GGY  G D  +
Sbjct: 121 EAGHYPAIDIGQSISRCMNQVTSLDHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASV 180

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           DKAV   P I  FL+Q   D+      + +  +LQ
Sbjct: 181 DKAVKMFPAIERFLRQ---DMREPAALELVQSRLQ 212


>gi|320527155|ref|ZP_08028342.1| ATP synthase F1, beta subunit [Solobacterium moorei F0204]
 gi|320132483|gb|EFW25026.1| ATP synthase F1, beta subunit [Solobacterium moorei F0204]
          Length = 464

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 165/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+PIDG   LG+      + I    P    +Q   +  +TGI+VID+  P   
Sbjct: 88  GRMFNVLGEPIDG---LGEVSAKHKLPIHRDAPTFAQQQTTSEILETGIKVIDLLCPYSK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +   + +++ VGER RE  +   +      LK 
Sbjct: 145 GGKIGLFGGAGVGKTVLMQELIHNIAIEHGGRSVVAGVGERTREGNDMYHEMEESGVLKN 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+     +ESP  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++   G 
Sbjct: 205 TVLTYGQMNESPGARMRVALSALTMAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ RL ERI  +  +KG+IT+V ++ V  D+  DP   +  S LD  
Sbjct: 265 MPSAVGYQPTLATEMGRLQERI--TSTDKGSITSVQAIYVPADDLTDPAPATTFSHLDAR 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+RS+A  G YP VDPL S SR+ D     DE  ++   +  ++ R+ E +DI  I G
Sbjct: 323 LVLDRSIAALGIYPAVDPLGSSSRMLDPLVIGDEHYEVARQVQQILQRYRELQDIIAILG 382


>gi|241895225|ref|ZP_04782521.1| F0F1 ATP synthase subunit beta [Weissella paramesenteroides ATCC
           33313]
 gi|241871531|gb|EER75282.1| F0F1 ATP synthase subunit beta [Weissella paramesenteroides ATCC
           33313]
          Length = 466

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 163/297 (54%), Gaps = 10/297 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GRV N LG+P+DG ++LG  D+  + + +  PA +         +TGI+VID+  P 
Sbjct: 85  ATLGRVFNVLGEPVDGGEALGD-DVQRDPIHRDAPAYDELSTSTEILETGIKVIDLLAPY 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   L
Sbjct: 144 VRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMQGSGVL 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
           K++ +V    +E P  R    LT +TIAE+F    G +VLL +D+I RF  +  E++   
Sbjct: 204 KQTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVNGQDVLLFIDNIYRFTQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD
Sbjct: 264 GRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
               L RSL ++G YP VDPLAS S  LA +    +   + + + H + R+ E +DI
Sbjct: 322 ATTNLERSLTQQGIYPAVDPLASTSTALAPEIVGQEHYDVATEVQHTLQRYRELQDI 378


>gi|256848005|ref|ZP_05553449.1| ATP synthase F1, beta subunit [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715065|gb|EEU30042.1| ATP synthase F1, beta subunit [Lactobacillus coleohominis
           101-4-CHN]
          Length = 473

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 172/328 (52%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG    G+    M I    P   +     +  +TGI+VID+  P   G
Sbjct: 88  LGRVFNVLGEPIDGGPEFGEDAQRMPIHRDAPKYDDLNNETEILETGIKVIDLLAPYVRG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   L K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERSREGNDMYYEMKGSGVLDKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPLAS S  L  +    +  ++ + + H++ R+ E +DI  I   
Sbjct: 326 NLERRLTQIGIYPAVDPLASTSTALTPEIVGQEHYEVATEVQHVLQRYRELQDIISI--- 382

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V +   I +FL QS
Sbjct: 383 -LGMDELSDEEKTIVARARRIQNFLSQS 409


>gi|206900262|ref|YP_002251666.1| ATP synthase F1, beta subunit [Dictyoglomus thermophilum H-6-12]
 gi|226740190|sp|B5YBP8|ATPB_DICT6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|206739365|gb|ACI18423.1| ATP synthase F1, beta subunit [Dictyoglomus thermophilum H-6-12]
          Length = 465

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/297 (36%), Positives = 169/297 (56%), Gaps = 16/297 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF---KTGIRVIDIFTPL 158
            GRV+N  G+PIDG + + +G    E+   +  A   +RV+  +   +TGI+ ID+ TP 
Sbjct: 85  LGRVVNVFGEPIDGGEKI-RG----EVTPIIKNAAEFRRVQPSYSILETGIKAIDLLTPF 139

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +       IS+   +GER RE  E ++E      L
Sbjct: 140 PQGGKIGLFGGAGVGKTVLIMELIHNVAVAHGGISVFAGIGERSREGNELWLEMKESGVL 199

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P +R   PLTA+TIAEYF    G +VLL++D+I R+  +  E+++  
Sbjct: 200 SKAALVFGQMNEPPGVRMRVPLTALTIAEYFRDYLGKDVLLLMDNIFRYVQAGMEVSSML 259

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +EL  + ERI     + G+ITAV +V V  D+  DP   ++ S LD
Sbjct: 260 GRIPSAVGYQPTLITELGEVEERI--LSTDTGSITAVQAVYVPADDLTDPAPATIFSHLD 317

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             +VL+RS+AE G YP VDPLAS S++ +  +   E   V+  +  ++  +E  +DI
Sbjct: 318 STLVLSRSIAEMGIYPAVDPLASSSQILEPKFVGYEHAEVARKVVEILQHYESLKDI 374


>gi|38906125|gb|AAR27815.1| ATP synthase beta chain [Lactobacillus gallinarum]
          Length = 371

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 28  LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 88  GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++T  G +
Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSTLLGRM 207

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D + DP   +  + LD   
Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADAYTDPAPSTTFAHLDATT 265

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 266 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHILQRYHELQDI 319


>gi|291276667|ref|YP_003516439.1| ATP synthase F1 sector subunit beta [Helicobacter mustelae 12198]
 gi|290963861|emb|CBG39697.1| ATP synthase F1 sector beta subunit [Helicobacter mustelae 12198]
          Length = 466

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 166/299 (55%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ IDG + L K   +  I  + P   N+    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVIGEVIDGGEEL-KDVQTWPIHREAPSFENQSTKTEMFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV S LD   
Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFSHLDAKT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D     +E  ++ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSSSRILDPQIVGEEHYRIATGIQQILQKYKDLQDIIAILG 382


>gi|159900585|ref|YP_001546832.1| F0F1 ATP synthase subunit beta [Herpetosiphon aurantiacus ATCC
           23779]
 gi|226740209|sp|A9AVV4|ATPB_HERA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|159893624|gb|ABX06704.1| ATP synthase F1, beta subunit [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 471

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 166/306 (54%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV +  G+PIDG+ ++G    +M I    P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRVFDVQGRPIDGEGAVGTTK-TMPIHRPAPTFEEQSNRAELFETGIKVIDLIAPFTKG 145

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-- 215
            + GVF G+G+GK+     L+S  A+      V    VGER RE  + I +     +   
Sbjct: 146 GKTGVFGGAGVGKTVIIQELISNIAKEQSGYSVFAG-VGERSREGNDLIHEMKDSKIPGT 204

Query: 216 ------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                 K+V+V    +E P  R    L+A+T+AEYF  +G +VLL +D+I RF  +  E+
Sbjct: 205 DQTVFDKTVMVFGQMNEPPGARLRVALSALTMAEYFREEGRDVLLFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P   GY  ++ +E+  L ERI  +  + G+IT++ +V V  D++ DP   +  
Sbjct: 265 SALLGRMPSQVGYQPTLGTEMGELQERI--TSTKTGSITSLQAVYVPADDYTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD  I L RS++E+G YP VDPLAS SR+ D     +E  ++ + +  ++ R+++ +D
Sbjct: 323 AHLDATISLERSISEKGIYPAVDPLASTSRILDPNIVGEEHYRVATEVQRMLQRYKDLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|6652833|gb|AAF22498.1|AF098522_8 F1F0-ATPase subunit beta [Lactobacillus acidophilus]
          Length = 478

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 159/294 (54%), Gaps = 9/294 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG  +L K      I  + P   N     K  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPALPKDHPREGIHKEAPKYENLTTSRKNLETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQKIIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ + + +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTI-TRMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAYLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 324 NLERSLVEQGIYPAVDPLESSSSALDPEEVGQEHYEVATRVQHVLQRYHELQDI 377


>gi|38906131|gb|AAR27818.1| ATP synthase beta chain [Lactobacillus helveticus]
          Length = 371

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 28  LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 88  GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 266 NLERSLVEQGIYPAVDPLESTSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 319


>gi|167755038|ref|ZP_02427165.1| hypothetical protein CLORAM_00542 [Clostridium ramosum DSM 1402]
 gi|237735237|ref|ZP_04565718.1| ATP synthase subunit beta [Mollicutes bacterium D7]
 gi|167705088|gb|EDS19667.1| hypothetical protein CLORAM_00542 [Clostridium ramosum DSM 1402]
 gi|229380982|gb|EEO31073.1| ATP synthase subunit beta [Coprobacillus sp. D7]
          Length = 468

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 162/298 (54%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PIDG ++LG     M I    P    ++   +  +TGI+V+D+  P   G 
Sbjct: 89  GRMFNVLGQPIDGKEALGDSTKKMPIHRSAPTYAEQRTETEILETGIKVVDLICPFIKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  F  +   +   +S+   VGER RE  + + E      L K+ 
Sbjct: 149 KIGLFGGAGVGKTVLIQEFINNIATEHGGLSVFAGVGERSREGNDLYYEMKESGVLSKTT 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AE F   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 209 LVFGQMNEPPGARLRVALTGLTMAEEFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRVP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 269 SQAGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDAKVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+A  G YP VDPL S SR  D      E  ++   +  ++ RF+E +DI  I G
Sbjct: 327 LDRSIAALGIYPAVDPLNSSSRALDPLVVGTEHYEVAHGVQQILQRFQELQDIIAILG 384


>gi|331701229|ref|YP_004398188.1| ATP synthase subunit beta [Lactobacillus buchneri NRRL B-30929]
 gi|329128572|gb|AEB73125.1| ATP synthase subunit beta [Lactobacillus buchneri NRRL B-30929]
          Length = 478

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 170/328 (51%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PIDG    G       I    P         +  +TGI+VID+  P   G
Sbjct: 88  LGRVFNVLGDPIDGGPEFGPDAERWPIHRDAPKYDQLNPSTEILETGIKVIDLLEPYTRG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   L+K+
Sbjct: 148 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLEKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRI 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD   
Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
            L RSL ++G YP VDPLAS S   D A    E  ++ + + H++ R+ E +DI  I   
Sbjct: 326 NLERSLTQQGIYPAVDPLASTSSALDPAIVGQEHYEVATEVQHVLQRYRELQDIISI--- 382

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420
             G+D + D+    V++   I  FL QS
Sbjct: 383 -LGMDELSDEEKTVVNRARRIQFFLSQS 409


>gi|260102580|ref|ZP_05752817.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
 gi|260083607|gb|EEW67727.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
          Length = 479

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPAFSKDHPRESIHKEAPEYEDLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHILQRYHELQDI 378


>gi|38906119|gb|AAR27812.1| ATP synthase beta chain [Lactobacillus amylovorus]
          Length = 371

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 28  LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 88  GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 266 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHILQRYHELQDI 319


>gi|309790652|ref|ZP_07685205.1| F0F1 ATP synthase subunit beta [Oscillochloris trichoides DG6]
 gi|308227318|gb|EFO80993.1| F0F1 ATP synthase subunit beta [Oscillochloris trichoides DG6]
          Length = 459

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 166/307 (54%), Gaps = 15/307 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PIDG   +    +    +   PP+   Q  E + F+TGI+VID+  P 
Sbjct: 73  ATLGRVFNVLGQPIDGAGPVA-ASVERRPIHNEPPSFEEQSTEAQVFETGIKVIDLIAPF 131

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLG 211
             G +  +F G+G+GK+ ++     +   ++   S+   VGER RE    + E  E  + 
Sbjct: 132 TRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVGERSREGNDLIAEMKEAQID 191

Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           D      K+V+V    +E P  R    LTA+T+AEYF  +G ++LL +D+I RF  +  E
Sbjct: 192 DKTTVFDKTVMVFGQMNEPPGARLRVGLTALTMAEYFRDEGRDILLFVDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +++  G +P   GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D++ DP   +V
Sbjct: 252 VSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITSMQAVYVPADDYTDPAPATV 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  I L RS+AE   +P VDPLAS SR+ D     +E  ++   +  ++ R+ + +
Sbjct: 310 FAHLDATISLERSIAERAIFPAVDPLASTSRILDPHVVGEEHYRVAQDVKRVLQRYRDLK 369

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 370 DIIAILG 376


>gi|227877281|ref|ZP_03995354.1| H(+)-transporting two-sector ATPase [Lactobacillus crispatus
           JV-V01]
 gi|256842844|ref|ZP_05548332.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256848792|ref|ZP_05554226.1| F0F1 ATP synthase subunit beta [Lactobacillus crispatus MV-1A-US]
 gi|262045810|ref|ZP_06018774.1| ATP synthase F1, beta subunit [Lactobacillus crispatus MV-3A-US]
 gi|293381679|ref|ZP_06627660.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 214-1]
 gi|295692633|ref|YP_003601243.1| ATP synthase subunit beta [Lactobacillus crispatus ST1]
 gi|312977636|ref|ZP_07789383.1| ATP synthase F1, beta subunit [Lactobacillus crispatus CTV-05]
 gi|227863137|gb|EEJ70583.1| H(+)-transporting two-sector ATPase [Lactobacillus crispatus
           JV-V01]
 gi|256614264|gb|EEU19465.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256714331|gb|EEU29318.1| F0F1 ATP synthase subunit beta [Lactobacillus crispatus MV-1A-US]
 gi|260573769|gb|EEX30325.1| ATP synthase F1, beta subunit [Lactobacillus crispatus MV-3A-US]
 gi|290921726|gb|EFD98747.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 214-1]
 gi|295030739|emb|CBL50218.1| ATP synthase subunit beta [Lactobacillus crispatus ST1]
 gi|310895375|gb|EFQ44442.1| ATP synthase F1, beta subunit [Lactobacillus crispatus CTV-05]
          Length = 479

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYADLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D     +E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378


>gi|227499461|ref|ZP_03929572.1| V family two sector ATPase, V(1) subunit B [Anaerococcus tetradius
           ATCC 35098]
 gi|227218523|gb|EEI83766.1| V family two sector ATPase, V(1) subunit B [Anaerococcus tetradius
           ATCC 35098]
          Length = 454

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 188/356 (52%), Gaps = 23/356 (6%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID 114
           D +GQV++I+ + V I   G  EE SL D+V  FH     I  +    GR  N +G PID
Sbjct: 38  DFVGQVVKIDDETVTIEVFGNTEEFSLDDIVVSFHEKPLEIPLNESILGRSFNGIGNPID 97

Query: 115 -GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            G D       S+E +   P A  R+      +TGI  ID+ T L  GQ++ VF+GSG+ 
Sbjct: 98  NGGDIYSDHCYSVEGLPLNPVA--REYPRDFIQTGISSIDVLTTLIRGQKLPVFSGSGLS 155

Query: 174 KSTLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD 225
            + L +   R          CF   + + +G +  E   F + +    ++  VV+     
Sbjct: 156 HNELAAQIVRQAKLKTDEDFCF---VFAAMGIKKDEAMFFEDAFNKAGVRDKVVMYQNLA 212

Query: 226 ESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +SPI+ ++ AP  A+T AEY +  K  +VL+I+  +T ++ ++RE+++  GE+P  +GYP
Sbjct: 213 DSPIMERLIAPKCALTAAEYLAYEKNYHVLVIITDMTSYSEALREVSSIRGEVPSRKGYP 272

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
             ++S+L  L ER G  E  KG++T +  + +  D+   P+AD    I +G IV++R+L+
Sbjct: 273 GYLYSDLASLYERAGMIEGVKGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRALS 332

Query: 344 EEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +G YPP++ L S+SRL      +    AD + L++ +     + +E R+I  I G
Sbjct: 333 NKGIYPPINVLPSLSRLMKDGIGEGYTRADHEDLMNQIYESYSKVQEVRNIAQIVG 388


>gi|161507276|ref|YP_001577230.1| F0F1 ATP synthase subunit beta [Lactobacillus helveticus DPC 4571]
 gi|172048219|sp|A8YUK1|ATPB_LACH4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160348265|gb|ABX26939.1| ATP synthase beta subunit [Lactobacillus helveticus DPC 4571]
 gi|328468723|gb|EGF39705.1| F0F1 ATP synthase subunit beta [Lactobacillus helveticus MTCC 5463]
          Length = 479

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPAFSKDHPRESIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDI 378


>gi|1168577|sp|P42466|ATPB_HERAU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|560837|emb|CAA54203.1| ATPase beta-subunit [Herpetosiphon aurantiacus]
          Length = 471

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 165/306 (53%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV +  G+PIDG+  +G    +M I    P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRVFDVQGRPIDGEGPVGTTK-TMPIHRPAPTFEEQSNRAELFETGIKVIDLIAPFTKG 145

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-- 215
            + GVF G+G+GK+     L+S  A+      V    VGER RE  + I +     +   
Sbjct: 146 GKTGVFGGAGVGKTVIIQELISNIAKEQSGYSVFAG-VGERSREGNDLIHEMKDSKIPGT 204

Query: 216 ------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                 K+V+V    +E P  R    L+A+T+AEYF  +G +VLL +D+I RF  +  E+
Sbjct: 205 DQTVFDKTVMVFGQMNEPPGARLRVALSALTMAEYFREEGRDVLLFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P   GY  ++ +E+  L ERI  +  + G+IT++ +V V  D++ DP   +  
Sbjct: 265 SALLGRMPSQVGYQPTLGTEMGELQERI--TSTKTGSITSLQAVYVPADDYTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD  I L RS++E+G YP VDPLAS SR+ D     +E  ++ + +  ++ R+++ +D
Sbjct: 323 AHLDATISLERSISEKGIYPAVDPLASTSRILDPNIVGEEHYRVATEVQRMLQRYKDLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|213422101|ref|ZP_03355167.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 223

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
            V ATSD   + R  A   A T+AEYF  +G  V+L +DS+TR+A ++R++A  SGE P 
Sbjct: 3   AVFATSDFPSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPA 62

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP SVF  LPRLLER  P    +G+ITA  +VL++ +   DP+AD +RSILDGH+ L
Sbjct: 63  RRGYPASVFDNLPRLLER--PGATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYL 120

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA +G YP +D L SVSR+  +  +    +  S++  L+ R EE +    +G YRPG
Sbjct: 121 SRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPG 180

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            ++  D+A+     +  +L Q  +  SS D
Sbjct: 181 ENIDNDRAMQMRDSLKAWLCQPVAQYSSFD 210


>gi|58337090|ref|YP_193675.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus NCFM]
 gi|75432972|sp|Q5FKY0|ATPB_LACAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|58254407|gb|AAV42644.1| ATP synthase beta subunit [Lactobacillus acidophilus NCFM]
          Length = 479

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAYLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 378


>gi|255525815|ref|ZP_05392744.1| ATP synthase F1, beta subunit [Clostridium carboxidivorans P7]
 gi|255510458|gb|EET86769.1| ATP synthase F1, beta subunit [Clostridium carboxidivorans P7]
          Length = 466

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 167/300 (55%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVE-KGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID     G  + +M      P P+   Q V  + F+TGI+VID+  P  
Sbjct: 87  LGRLFNMLGQPID---ECGDCNATMTYPIHRPAPSFEDQSVSPEMFETGIKVIDLIAPYQ 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      + 
Sbjct: 144 RGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVID 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K+ +V    +E P  R    LT +T+AEYF  KG +VLL +D+I RF  +  E++   G 
Sbjct: 204 KTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALLGR 263

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 264 IPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDAT 321

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+RS++E G YP VDPL S SR+ D     +E  ++ SS+ H++ R+ E +DI  I G
Sbjct: 322 TVLSRSISELGIYPAVDPLESSSRILDPRIVGEEHYEIASSVKHILERYRELQDIIAILG 381


>gi|38906129|gb|AAR27817.1| ATP synthase beta chain [Lactobacillus johnsonii]
          Length = 371

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 162/295 (54%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 28  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 86

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 87  GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 146

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 147 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 206

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY   + +E+ +L ERI  +  +KG+IT++ +V V  D++ D    +  + LD  
Sbjct: 207 MPSAVGYQPXLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDTALSTTFAHLDAT 264

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 265 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 319


>gi|34556938|ref|NP_906753.1| F0F1 ATP synthase subunit beta [Wolinella succinogenes DSM 1740]
 gi|1168583|sp|P42470|ATPB_WOLSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|587588|emb|CAA54207.1| ATPase beta-subunit [Wolinella succinogenes]
 gi|34482653|emb|CAE09653.1| ATP SYNTHASE F1 SECTOR BETA SUBUNIT [Wolinella succinogenes]
          Length = 467

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  IDG D L K  +   I    P   N+    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVVGDVIDGGDEL-KEPVKWSIHRTAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L K 
Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D +    D  K  + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYKTATGVQQVLQKYKDLQDIIAILG 382


>gi|169351551|ref|ZP_02868489.1| hypothetical protein CLOSPI_02331 [Clostridium spiroforme DSM 1552]
 gi|169291773|gb|EDS73906.1| hypothetical protein CLOSPI_02331 [Clostridium spiroforme DSM 1552]
          Length = 468

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+PIDG ++LG  D+    + +  P   +QR E    +TGI+V+D+  P 
Sbjct: 86  ATLGRMFNVLGQPIDGKEALGD-DVKKMPIHRSAPTYAQQRTETEILETGIKVVDLICPF 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+  F  +       +S+   VGER RE  + + E      L
Sbjct: 145 IKGGKIGLFGGAGVGKTVLIQEFINNIATQHGGLSVFAGVGERSREGNDLYYEMKESGVL 204

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AE F   +G +VLL +D+I RF  +  E++   
Sbjct: 205 SKTTLVFGQMNEPPGARLRVALTGLTMAEEFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 264

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P   GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD
Sbjct: 265 GRVPSQAGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLD 322

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VL+RS+A  G YP VDPL S SR  D      E  ++   +  ++ RF+E +DI  I
Sbjct: 323 AKVVLDRSIAALGIYPAVDPLNSSSRALDPLVVGKEHYEVAHGVQQILQRFQELQDIIAI 382

Query: 393 GG 394
            G
Sbjct: 383 LG 384


>gi|116333888|ref|YP_795415.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis ATCC 367]
 gi|122269425|sp|Q03QY8|ATPB_LACBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28193537|emb|CAD48596.1| F1F0-ATPase subunit beta [Lactobacillus brevis]
 gi|116099235|gb|ABJ64384.1| F0F1-type ATP synthase, beta subunit [Lactobacillus brevis ATCC
           367]
          Length = 471

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PIDG    G     M I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGDPIDGGAEFGPDAERMPIHRDAPKYDELNPTTEILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   LK++
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYWEMKGSGVLKQT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L R+L ++G YP VDPLAS S  LA +    +   + + +  ++ R+ E +DI
Sbjct: 325 NLERALTQQGIYPAVDPLASTSTALAPEIIGQEHYDVATEVQRVLQRYHELQDI 378


>gi|315038012|ref|YP_004031580.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1112]
 gi|325956465|ref|YP_004291877.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus 30SC]
 gi|312276145|gb|ADQ58785.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1112]
 gi|325333030|gb|ADZ06938.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus 30SC]
 gi|327183292|gb|AEA31739.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1118]
          Length = 479

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHILQRYHELQDI 378


>gi|38906117|gb|AAR27811.1| ATP synthase beta chain [Lactobacillus gasseri ATCC 33323]
          Length = 371

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 162/295 (54%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N LG PIDG  +LGK D+  E + K  P  +     E+  +TGI+VID+  P   
Sbjct: 28  LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 86

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+  +T++     +   +   IS+   VGER RE  + + E      L K
Sbjct: 87  GGKVGLFGGAGVATTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 146

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 147 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 206

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 207 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 264

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             L R L E+G YP VDPL S S   D     +E   V+  + H++ R++E +DI
Sbjct: 265 TNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVAVQVQHILQRYQELQDI 319


>gi|12045261|ref|NP_073072.1| F0F1 ATP synthase subunit beta [Mycoplasma genitalium G37]
 gi|2506209|sp|P47639|ATPB_MYCGE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|3844991|gb|AAC71627.1| ATP synthase F1, beta subunit [Mycoplasma genitalium G37]
 gi|166078639|gb|ABY79257.1| ATP synthase F1, beta subunit [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 476

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 169/301 (56%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PIDG + L K   LS+    + PPA + Q      F+TGI+VID+ TP  
Sbjct: 92  LGRMFNVLGEPIDGKEPLPKKPKLSIH---RNPPAFDEQPNTVDIFETGIKVIDLLTPYV 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E   G  + 
Sbjct: 149 RGGKIGLFGGAGVGKTVLVQELIHNIAKEHSGLSVFAGVGERTREGNDLYYEMIQGGVID 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
           K+V+V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  +  E++   G
Sbjct: 209 KTVLVFGQMNEPPGARMRVALTALTMAEYFRDHDNQNVLLFIDNIFRFTQAGSEVSALLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 269 RMPSAVGYQPTLAIEMGKLQERIAST--KTGSITSVQAIYVPADDLTDPAPATTFTHLDA 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R++A  G +P ++PL S SRL D +    +  K+   + +++ RF E +DI  I 
Sbjct: 327 KTVLDRNIAALGIFPAINPLESTSRLLDPSVVGINHYKVALGVQNILQRFAELQDIIAIL 386

Query: 394 G 394
           G
Sbjct: 387 G 387


>gi|13508337|ref|NP_110287.1| F0F1 ATP synthase subunit beta [Mycoplasma pneumoniae M129]
 gi|2493024|sp|Q50331|ATPB_MYCPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|1209766|gb|AAC43659.1| ATP synthase beta chain [Mycoplasma pneumoniae]
 gi|1673912|gb|AAB95892.1| ATP synthase beta chain [Mycoplasma pneumoniae M129]
 gi|301633266|gb|ADK86820.1| ATP synthase F1, beta subunit [Mycoplasma pneumoniae FH]
          Length = 475

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 191/362 (52%), Gaps = 17/362 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           DIV    +G  E ++  + V ++     +       GR+ N LGKPIDG + L K    +
Sbjct: 56  DIVRCIALGPTEGLARNEKVTNYNHPIEVPVGKNVLGRMFNVLGKPIDGKEELPKKP-QL 114

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I  K P   ++    + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+     +  
Sbjct: 115 PIHRKPPSFDDQSNTLEIFETGIKVIDLLTPYARGGKIGLFGGAGVGKTVLVQELIHNIA 174

Query: 187 FDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
            +   +S+   VGER RE  + + E   G  + K+ +V    +E P  R    LTA+T+A
Sbjct: 175 KEHSGLSVFAGVGERTREGNDLYYEMIQGGVIDKTALVFGQMNEPPGARMRVALTALTMA 234

Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF    + +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  + 
Sbjct: 235 EYFRDHDNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIAST- 293

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R++A  G +P ++PL S SRL 
Sbjct: 294 -KTGSITSVQAIYVPADDLTDPAPATTFTHLDAKTVLDRNIAALGIFPAINPLESTSRLL 352

Query: 362 D-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFL 417
           D      +  K+   + +++ RF E +DI  I     G+D + D+    V +   I +FL
Sbjct: 353 DPNIVGINHYKVALGVQNILQRFAELQDIIAI----LGIDELADEDKIIVERARRIRNFL 408

Query: 418 KQ 419
            Q
Sbjct: 409 SQ 410


>gi|227874106|ref|ZP_03992312.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227840018|gb|EEJ50442.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 463

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 169/299 (56%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ IDG D +  G+   EI  K P  +++  V++  +TGI+VID+  P   G
Sbjct: 85  LGRLFNVLGETIDGKDPITDGE-EWEIHRKPPAFVDQSPVQEVLETGIKVIDLIAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+    R+   +     I + VGER RE  + ++E      +K +
Sbjct: 144 GKVGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLYMEMTESGVIKNT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +ESP  R     T +T+AEYF   +  +VLL +D+I RF  +  E+++  G +
Sbjct: 204 ALVFGQMNESPGARMRVAETGLTMAEYFRDVQKKDVLLFIDNIFRFVQAGSEVSSLLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  ++G++T+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLASEMGQLQERIAST--KEGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ +++    E      S+  ++ +++E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEESIVGKEHYDTAQSVLQILQKYKELQDIIAILG 380


>gi|260892012|ref|YP_003238109.1| ATP synthase F1, beta subunit [Ammonifex degensii KC4]
 gi|260864153|gb|ACX51259.1| ATP synthase F1, beta subunit [Ammonifex degensii KC4]
          Length = 475

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 167/299 (55%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PIDG   + K +    I    PP + +    +  +TG++VID+  P   G
Sbjct: 94  LGRLLDVLGNPIDGKGPI-KAEKYYPIHRPAPPLVEQSTKVEQLETGLKVIDLLVPFMKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ ++     +       IS+   VGER RE  E ++E      L K+
Sbjct: 153 GKIGMFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNELYLEMTEAGVLDKT 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++V    +E P  R    LTA+ +AEYF   +G +VLL +D+I RFA +  E++   G +
Sbjct: 213 MMVFGQMNEPPGCRLRVGLTALCLAEYFRDEEGADVLLFIDNIFRFAQAGTEVSALLGRM 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG+IT+V ++ V  D+  DP   +  + LDG +
Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTVKGSITSVQAIYVPADDLTDPAPATTFAHLDGTV 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D K    +  ++   +  ++ R++E +DI  I G
Sbjct: 331 VLSRQIAELGIYPAVDPLDSTSRILDPKVVGVEHYQVARGVQKVLQRYKELQDIIAILG 389


>gi|254520283|ref|ZP_05132339.1| ATP synthase F1 sector subunit beta [Clostridium sp. 7_2_43FAA]
 gi|226914032|gb|EEH99233.1| ATP synthase F1 sector subunit beta [Clostridium sp. 7_2_43FAA]
          Length = 463

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 179/330 (54%), Gaps = 23/330 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GRV N LG PID       GD+ ++ M  +    P+   Q +E + F+TGI+VID+  P
Sbjct: 87  LGRVFNVLGHPIDN-----AGDVEIKEMYPIHRPAPSFKEQSLEPQMFETGIKVIDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      
Sbjct: 142 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMKESGV 201

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K+ +V    +ESP  R    LT +T+AEYF  +G +VLL +D+I RF  +  E++   
Sbjct: 202 IDKTALVFGQMNESPGARMRVSLTGLTMAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALL 261

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 262 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLD 319

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+RS+AE G YP VDPL S SR+ D +    +   + + + +++ R++E +DI  I
Sbjct: 320 ATTVLSRSIAELGIYPAVDPLESNSRILDPRVVGREHYDVATEVKNILERYKELQDIIAI 379

Query: 393 GGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
                GVD + D   K V +   +  FL Q
Sbjct: 380 ----LGVDELSDEDKKVVARARRVQRFLSQ 405


>gi|213585852|ref|ZP_03367678.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 205

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 113/182 (62%)

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 2   ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 61

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 62  GNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 121

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      +      V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL
Sbjct: 122 SRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVGAYAKGSDPMLDKAITLWPQLEAFL 181

Query: 418 KQ 419
           +Q
Sbjct: 182 QQ 183


>gi|227903658|ref|ZP_04021463.1| H(+)-transporting two-sector ATPase [Lactobacillus acidophilus ATCC
           4796]
 gi|227868545|gb|EEJ75966.1| H(+)-transporting two-sector ATPase [Lactobacillus acidophilus ATCC
           4796]
          Length = 479

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 378


>gi|281418491|ref|ZP_06249510.1| ATP synthase F1, beta subunit [Clostridium thermocellum JW20]
 gi|281407575|gb|EFB37834.1| ATP synthase F1, beta subunit [Clostridium thermocellum JW20]
          Length = 464

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 168/303 (55%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157
            GRV N LG+PIDG     KGD+       + +  P ++ Q+ V +  +TGI+VID+  P
Sbjct: 88  LGRVFNVLGEPIDG-----KGDVKATTYLPIHREAPGLDEQKPVTEILETGIKVIDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      
Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGERSREGNDLWNEMNESGV 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272
           ++K+ +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++  
Sbjct: 203 IQKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLFIDNIFRFIQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + L
Sbjct: 263 LGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+R + E+G YP VDPL S SR+ D+    DE   V+  +  ++ R++E +DI  
Sbjct: 321 DATTVLSRHIVEQGIYPAVDPLDSTSRVLDRRIVGDEHYTVARKVQEILQRYKELQDIIA 380

Query: 392 IGG 394
           I G
Sbjct: 381 ILG 383


>gi|224438542|ref|ZP_03659462.1| F0F1 ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818]
 gi|313144968|ref|ZP_07807161.1| ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818]
 gi|313129999|gb|EFR47616.1| ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818]
          Length = 466

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G  IDG + L   DL   I  + P   N+    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVTGDVIDGGELLAT-DLKWAIHREAPSFENQSTRTEMFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAGVGERTREGNDLYNEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGSEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV S LD   
Sbjct: 266 PSAVGYQPTLAGEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFSHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR ++E+G YP VDPL S SR+ D     +E  K+ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKISEKGIYPAVDPLDSTSRILDPQVVGEEHYKVATGIQQVLQKYKDLQDIIAILG 382


>gi|257066503|ref|YP_003152759.1| V-type ATP synthase subunit B [Anaerococcus prevotii DSM 20548]
 gi|256798383|gb|ACV29038.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaerococcus prevotii DSM 20548]
          Length = 454

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 187/356 (52%), Gaps = 23/356 (6%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID 114
           D +GQV++I+ D V I   G  EE SL D+V  FH     I       GR  N +G+PID
Sbjct: 38  DFVGQVVKIDDDTVTIEVFGNTEEFSLNDIVVSFHEKPLEIPLDESILGRSFNGIGEPID 97

Query: 115 -GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            G D       S+E +   P A  R+      +TGI  ID  T L  GQ++ +F+GSG+ 
Sbjct: 98  NGGDIYSDDKYSVEGLPLNPVA--REYPRDFIQTGISSIDTLTTLIRGQKLPIFSGSGLL 155

Query: 174 KSTLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD 225
            + + +   R          CF   + + +G +  E   F + +    ++  VV+     
Sbjct: 156 HNEIAAQIVRQAKLKTDENFCF---VFAAMGIKKDEAMFFEDAFNKAGVRDKVVMYQNLA 212

Query: 226 ESPILRKM-APLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +SPI+ ++ AP  A+T AEY + K G +VL+I+  +T ++ ++RE+++  GE+P  +GYP
Sbjct: 213 DSPIMERLVAPKCALTAAEYLAYKRGYHVLVIVTDMTSYSEALREVSSIRGEVPSRKGYP 272

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
             ++S+L  L ER G     KG++T +  + +  D+   P+AD    I +G IV++RSL+
Sbjct: 273 GYLYSDLASLYERAGMIRGVKGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRSLS 332

Query: 344 EEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +G YPP++ L S+SRL      +    AD + L++ L     + ++ R+I  I G
Sbjct: 333 NKGIYPPINVLPSLSRLMKDGIGEGYTRADHEDLMNQLYESYSKVQDVRNISQIVG 388


>gi|125654681|ref|YP_001033875.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides 2.4.1]
 gi|123421163|sp|Q3HKH4|ATPB2_RHOS4 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|77386341|gb|ABA81770.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 464

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 8/305 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G+P D    +  G     I+   PP   +    + F TGI+
Sbjct: 70  GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAGAPRAPILHPAPPLAAQDARFQVFSTGIK 129

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207
           V+D+  PL  G +  +F G+G+GK+ L+    R+    +D + + + VGER RE  E + 
Sbjct: 130 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 189

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +      L ++V+V    +E P  R   PLTA+TIAE F   +G NVLL++D++ RF  +
Sbjct: 190 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 249

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P   GY  ++ +E+  L ERI  +   + ++TA+ +V V  D+  DP  
Sbjct: 250 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 307

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            ++ + +D  +VL+R LA EG YP +DPLA+ S L D A   +E   V+  L   I  + 
Sbjct: 308 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 367

Query: 385 ETRDI 389
           E RD+
Sbjct: 368 ELRDV 372


>gi|289678984|ref|ZP_06499874.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 199

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 110/172 (63%)

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+I
Sbjct: 3   KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 62

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S 
Sbjct: 63  TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 122

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +          L  R+++TRD+  +G Y  G D   D A+   P++  + +Q
Sbjct: 123 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQ 174


>gi|219856596|ref|YP_002473718.1| hypothetical protein CKR_3253 [Clostridium kluyveri NBRC 12016]
 gi|219570320|dbj|BAH08304.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 466

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 168/299 (56%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N LG+PID +  +   + S   + +  P+   Q V+ + F+TGI+VID+  P   
Sbjct: 88  LGRLFNMLGQPIDENGEVEADEYSP--IHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQK 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ ++     +   +   +S+   VGER RE  + + E      + K
Sbjct: 146 GGKIGLFGGAGVGKTVIIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMQESGVINK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    LT +T+AE+F  +G +VLL +D+I RF  +  E++   G +
Sbjct: 206 TALVFGQMNEPPGARMRVALTGLTMAEHFRDEGQDVLLFIDNIFRFTQAGSEVSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 266 PSAVGYQPTLATEMGSLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFTHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS++E G YP VDPLAS SR+ D     +E  K+ S + H++ R+ E +DI  I G
Sbjct: 324 VLSRSISEIGIYPAVDPLASTSRILDPRVVGEEHYKVASDVKHILERYSELQDIIAILG 382


>gi|125975091|ref|YP_001039001.1| F0F1 ATP synthase subunit beta [Clostridium thermocellum ATCC
           27405]
 gi|256003255|ref|ZP_05428247.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 2360]
 gi|171769992|sp|A3DIM9|ATPB_CLOTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|125715316|gb|ABN53808.1| ATP synthase F1 subcomplex beta subunit [Clostridium thermocellum
           ATCC 27405]
 gi|255992946|gb|EEU03036.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 2360]
 gi|316939256|gb|ADU73290.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 1313]
          Length = 464

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 168/303 (55%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157
            GRV N LG+PIDG     KGD+       + +  P ++ Q+ V +  +TGI+VID+  P
Sbjct: 88  LGRVFNVLGEPIDG-----KGDVKATTYLPIHREAPGLDEQKPVTEILETGIKVIDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      
Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGERSREGNDLWNEMNESGV 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272
           ++K+ +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++  
Sbjct: 203 IEKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLFIDNIFRFIQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + L
Sbjct: 263 LGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+R + E+G YP VDPL S SR+ D+    DE   V+  +  ++ R++E +DI  
Sbjct: 321 DATTVLSRHIVEQGIYPAVDPLDSTSRVLDRRIVGDEHYTVARKVQEILQRYKELQDIIA 380

Query: 392 IGG 394
           I G
Sbjct: 381 ILG 383


>gi|153956279|ref|YP_001397044.1| F0F1 ATP synthase subunit beta [Clostridium kluyveri DSM 555]
 gi|190358660|sp|A5N3H7|ATPB_CLOK5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146349137|gb|EDK35673.1| AtpD [Clostridium kluyveri DSM 555]
          Length = 464

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 168/299 (56%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N LG+PID +  +   + S   + +  P+   Q V+ + F+TGI+VID+  P   
Sbjct: 86  LGRLFNMLGQPIDENGEVEADEYSP--IHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQK 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ ++     +   +   +S+   VGER RE  + + E      + K
Sbjct: 144 GGKIGLFGGAGVGKTVIIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMQESGVINK 203

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    LT +T+AE+F  +G +VLL +D+I RF  +  E++   G +
Sbjct: 204 TALVFGQMNEPPGARMRVALTGLTMAEHFRDEGQDVLLFIDNIFRFTQAGSEVSALLGRI 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEMGSLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFTHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS++E G YP VDPLAS SR+ D     +E  K+ S + H++ R+ E +DI  I G
Sbjct: 322 VLSRSISEIGIYPAVDPLASTSRILDPRVVGEEHYKVASDVKHILERYSELQDIIAILG 380


>gi|95929971|ref|ZP_01312711.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684]
 gi|95133940|gb|EAT15599.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684]
          Length = 468

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/301 (34%), Positives = 167/301 (55%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + + DL   I    P  +N+    + F+TGI+VID+  P   G
Sbjct: 90  LGRILNVVGEPVDEAGPV-EADLQWGIHRPAPEFVNQSTKVESFETGIKVIDLLAPYARG 148

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
            +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  +  E+      L 
Sbjct: 149 GKIGLFGGAGVGKTVLIMELINNIAQQHGGFS--VFAGVGERTREGNDLWEEMKESGVLD 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KAALVYGQMNEPPGARARVALSALTVAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 267 RIPSAVGYQPTLSTEMGELQERI--TTTDKGSITSVQAIYVPADDLTDPAPATAFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D     +E  KL   +  ++ R+++ +DI  I 
Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSSSRILDPQVVGEEHYKLARDVQFVLQRYKDLQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|320160783|ref|YP_004174007.1| ATP synthase subunit beta [Anaerolinea thermophila UNI-1]
 gi|319994636|dbj|BAJ63407.1| ATP synthase subunit beta [Anaerolinea thermophila UNI-1]
          Length = 466

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 168/306 (54%), Gaps = 10/306 (3%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS    GR+ N +GKPIDG  S+ + D+   I    P   ++    + F+TG++VID+
Sbjct: 84  VGPSTL--GRIFNVIGKPIDGKGSV-ESDIYYPIHRPAPRFEDQSTRVEVFETGLKVIDL 140

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF---DKVIISLVGERGREVREFIEDYLG 211
             P   G + G+F G+G GK+ ++    RS         + + VGER RE  +   + L 
Sbjct: 141 IAPFTKGGKTGIFGGAGTGKTVIIMELIRSIATVHKGNSVFAGVGERTREGTQLYREMLE 200

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +K +V+V    +E   +R    LTA+ +AEYF  +G +VLL +D+I RF  S  E++
Sbjct: 201 SGVMKDTVMVFGQMNEPSGVRLRVALTALAMAEYFRDQGRDVLLFIDNIFRFTMSGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+++DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLATEMGELQERI--TSTHQGSITSMQAVYVPADDYSDPAPVATFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  I L+R++ E+G +P VDPL S SR+ D     +E  +    +  ++ R+++ +DI
Sbjct: 319 HLDATIALDRAIVEKGIFPAVDPLVSTSRILDPLIVGEEHYRTAREVQRVLQRYKDLQDI 378

Query: 390 RLIGGY 395
             I G+
Sbjct: 379 IAILGF 384


>gi|283768661|ref|ZP_06341573.1| ATP synthase F1, beta subunit [Bulleidia extructa W1219]
 gi|283105053|gb|EFC06425.1| ATP synthase F1, beta subunit [Bulleidia extructa W1219]
          Length = 462

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ IDG  S+ + D  + I  + P    ++      +TGI+VID+  P   G 
Sbjct: 87  GRMFNVLGETIDGLGSI-QTDKRLPIHREAPSFSEQRTTSDILETGIKVIDLLCPYAKGG 145

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+     +   +   + +++ VGER RE  +   +      LK +V
Sbjct: 146 KIGLFGGAGVGKTVLMQELIHNIAIEHGGRSVVAGVGERTREGNDMYHEMKESGVLKNTV 205

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +     +ESP  R    LTA+T+AEYF   +   VLL +D+I RF  +  E++   G +P
Sbjct: 206 LTYGQMNESPGARMRVALTALTMAEYFRDEERQEVLLFIDNIFRFTQAGSEVSALLGRMP 265

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+ +L ERI  +  +KG+IT+V ++ V  D+  DP   +  S LD  +V
Sbjct: 266 SAVGYQPTLATEMGQLQERI--TSTDKGSITSVQAIYVPADDLTDPAPATTFSHLDARLV 323

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+A  G YP VDPL S SR+ D     +E  ++   +  ++ R++E +DI  I G
Sbjct: 324 LDRSIAALGIYPAVDPLGSSSRMLDPLVIGEEHYQVARQVQEILQRYKELQDIIAILG 381


>gi|269837450|ref|YP_003319678.1| ATP synthase F1, beta subunit [Sphaerobacter thermophilus DSM
           20745]
 gi|269786713|gb|ACZ38856.1| ATP synthase F1, beta subunit [Sphaerobacter thermophilus DSM
           20745]
          Length = 469

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 8/309 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N +G+P+D D    + D+   I    P    +    + F+TG++
Sbjct: 79  GPIKVPVGPATLGRIFNVVGRPVD-DGPPPQADVYYPIHRPAPSFEEQSTDVEPFETGLK 137

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207
           VID+  P   G + GVF G+G+GK+ ++    R+   +     + + VGER RE  +   
Sbjct: 138 VIDLIAPFTKGGKTGVFGGAGVGKTVIIMELIRNIAAEHGGYSVFTGVGERTREGTQLWG 197

Query: 208 DYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +     +  K+V+V    +E P  R    LT +T+AEYF  +G +VLL +D+I RF  + 
Sbjct: 198 EMRESGVADKTVLVFGQMNEPPGARLRVGLTGLTMAEYFRDEGRDVLLFIDNIFRFVQAG 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+ +L ERI  +  ++G+IT+V +V V  D++ DP   
Sbjct: 258 SEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKRGSITSVQAVYVPADDYTDPAPA 315

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD  I L RS+AE+G +P VDPLAS SR+ D      E  ++   +  ++ R+ +
Sbjct: 316 TTFAHLDATISLERSIAEQGLFPAVDPLASTSRILDPNIVGQEHYEVAREVQRVLQRYRD 375

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 376 LQDIIAILG 384


>gi|299782958|gb|ADJ40956.1| ATP synthase F1, beta subunit [Lactobacillus fermentum CECT 5716]
          Length = 473

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+P+D     G     M I    P   +     +  +TGI+VID+  P   G
Sbjct: 88  LGRVFNVLGEPVDNGPEFGPDAQRMPIHRDAPKYEDLSNTTEVLETGIKVIDLLAPYVRG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      L+K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPLAS S  L  +    +  ++ + + H++ R+ E +DI  I   
Sbjct: 326 NLERRLTQIGIYPAVDPLASTSTALTPEVVGQEHYEVATGVQHVLQRYRELQDIISI--- 382

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V +   I +FL QS
Sbjct: 383 -LGMDELSDEEKTIVARARRIQNFLSQS 409


>gi|187935792|ref|YP_001884711.1| F0F1 ATP synthase subunit beta [Clostridium botulinum B str. Eklund
           17B]
 gi|226740181|sp|B2TK00|ATPB_CLOBB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|187723945|gb|ACD25166.1| ATP synthase F1, beta subunit [Clostridium botulinum B str. Eklund
           17B]
          Length = 463

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+ N LGKPID       G++  E +  +    P+   Q VE + F+TGI+VID+  P
Sbjct: 87  LGRLFNVLGKPIDN-----AGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      
Sbjct: 142 YQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYHEMRESGV 201

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K+ +V    +E P  R    LT +T+AEYF  KG +VLL +D+I RF  +  E++   
Sbjct: 202 IDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALL 261

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD
Sbjct: 262 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFSHLD 319

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+RS+ E G YP VDPL S SR+ D     +E   + + + +++ R++E +DI  I
Sbjct: 320 ATTVLSRSIVELGIYPAVDPLESSSRILDPRLVGEEHYNVATKVKNILERYKELQDIIAI 379

Query: 393 GG 394
            G
Sbjct: 380 LG 381


>gi|184154917|ref|YP_001843257.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum IFO 3956]
 gi|227514481|ref|ZP_03944530.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum ATCC 14931]
 gi|260663296|ref|ZP_05864187.1| ATP synthase F1, beta subunit [Lactobacillus fermentum 28-3-CHN]
 gi|183226261|dbj|BAG26777.1| F1F0-ATPase beta subunit [Lactobacillus fermentum IFO 3956]
 gi|227087167|gb|EEI22479.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum ATCC 14931]
 gi|260552148|gb|EEX25200.1| ATP synthase F1, beta subunit [Lactobacillus fermentum 28-3-CHN]
          Length = 473

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+P+D     G     M I    P   +     +  +TGI+VID+  P   G
Sbjct: 88  LGRVFNVLGEPVDNGPEFGPDAQRMPIHRDAPKYEDLSNTTEVLETGIKVIDLLAPYVRG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      L+K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPLAS S  L  +    +  ++ + + H++ R+ E +DI  I   
Sbjct: 326 NLERRLTQIGIYPAVDPLASTSTALTPEVVGQEHYEVATGVQHVLQRYRELQDIISI--- 382

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V +   I +FL QS
Sbjct: 383 -LGMDELSDEEKTIVARARRIQNFLSQS 409


>gi|224418195|ref|ZP_03656201.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT
           98-5491]
 gi|253827522|ref|ZP_04870407.1| ATP synthase F1 sector beta subunit [Helicobacter canadensis MIT
           98-5491]
 gi|253510928|gb|EES89587.1| ATP synthase F1 sector beta subunit [Helicobacter canadensis MIT
           98-5491]
          Length = 471

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G  IDG ++L   +    I  + P   N+    + F+TGI+V+D+  P   G
Sbjct: 91  LGRIFNVTGDVIDGGEALNNPE-KWSIHREAPTFENQSTKTEMFETGIKVVDLLAPYSKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L K 
Sbjct: 150 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 210 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV + LD   
Sbjct: 270 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D +    D  ++ +S+  ++ ++++ +DI  I G
Sbjct: 328 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYRVATSVQQVLQKYKDLQDIIAILG 386


>gi|188589828|ref|YP_001919898.1| F0F1 ATP synthase subunit beta [Clostridium botulinum E3 str.
           Alaska E43]
 gi|251780163|ref|ZP_04823083.1| ATP synthase F1, beta subunit [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|226740180|sp|B2UZK0|ATPB_CLOBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|188500109|gb|ACD53245.1| ATP synthase F1, beta subunit [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243084478|gb|EES50368.1| ATP synthase F1, beta subunit [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 463

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+ N LGKPID       G++  E +  +    P+   Q VE + F+TGI+VID+  P
Sbjct: 87  LGRLFNVLGKPIDN-----AGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      
Sbjct: 142 YQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYHEMRESGV 201

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K+ +V    +E P  R    LT +T+AEYF  KG +VLL +D+I RF  +  E++   
Sbjct: 202 IDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALL 261

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD
Sbjct: 262 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFSHLD 319

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+RS+ E G YP VDPL S SR+ D     +E   + + + +++ R++E +DI  I
Sbjct: 320 ATTVLSRSIVELGIYPAVDPLESSSRILDPRLVGEEHYNVATKVKNILERYKELQDIIAI 379

Query: 393 GG 394
            G
Sbjct: 380 LG 381


>gi|118603005|ref|YP_904220.1| F0F1 ATP synthase subunit beta [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166222411|sp|A1AXU2|ATPB_RUTMC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118567944|gb|ABL02749.1| ATP synthase F1 subcomplex beta subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 459

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 8/309 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR++N LG+PID    +G+ ++S  I    P         +  +TGI+
Sbjct: 72  GPIKVPVGVKTLGRIMNVLGEPIDNAGDIGQ-EVSWAIHRSAPAYHELAPAAELLETGIK 130

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207
           VID+  P   G ++G+F G+G+GK+  +    R+   +     + S VGER RE  +F  
Sbjct: 131 VIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGVGERTREGNDFYH 190

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    N L K  +V    +E P  R    LT +T+AEYF  +G +VLL +D+I R+  + 
Sbjct: 191 EMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGHDVLLFIDNIYRYTLAG 250

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ SE+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 251 TEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPA 308

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  +VL+R +AE G YP VDPL S SR  D     +E   V+  +  ++ R++E
Sbjct: 309 TTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGVQSVLQRYKE 368

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 369 LKDIIAILG 377


>gi|227892670|ref|ZP_04010475.1| F0F1 ATP synthase subunit beta [Lactobacillus ultunensis DSM 16047]
 gi|227865541|gb|EEJ72962.1| F0F1 ATP synthase subunit beta [Lactobacillus ultunensis DSM 16047]
          Length = 479

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPEFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDI 378


>gi|313141730|ref|ZP_07803923.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT
           98-5491]
 gi|313130761|gb|EFR48378.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT
           98-5491]
          Length = 467

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G  IDG ++L   +    I  + P   N+    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVTGDVIDGGEALNNPE-KWSIHREAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L K 
Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D +    D  ++ +S+  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYRVATSVQQVLQKYKDLQDIIAILG 382


>gi|253680875|ref|ZP_04861678.1| ATP synthase F1, beta subunit [Clostridium botulinum D str. 1873]
 gi|253562724|gb|EES92170.1| ATP synthase F1, beta subunit [Clostridium botulinum D str. 1873]
          Length = 463

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N LGK ID D +  K +    I  +  P    Q VE + F+TGI+VID+  P   
Sbjct: 87  LGRLFNVLGKTIDEDGNF-KAEQYYPI-HRPAPTFEEQSVEPEMFETGIKVIDLIAPYQK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      + K
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVINK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    LT +T+AEYF  +G +VLL +D+I RF  +  E++   G +
Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRI 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D +    +   +   + H++ R++E +DI  I G
Sbjct: 323 VLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDIAIKVKHILERYKELQDIIAILG 381


>gi|331270433|ref|YP_004396925.1| ATP synthase F1 subunit beta [Clostridium botulinum BKT015925]
 gi|329126983|gb|AEB76928.1| ATP synthase F1, beta subunit [Clostridium botulinum BKT015925]
          Length = 463

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N LGK ID D +  K +    I  +  P    Q VE + F+TGI+VID+  P   
Sbjct: 87  LGRLFNVLGKTIDEDGNF-KAEQYYPI-HRPAPTFEEQSVEPEMFETGIKVIDLIAPYQK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      + K
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVINK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    LT +T+AEYF  +G +VLL +D+I RF  +  E++   G +
Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRI 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D +    +   +   + H++ R++E +DI  I G
Sbjct: 323 VLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDIAIKVKHILERYKELQDIIAILG 381


>gi|74318815|ref|YP_316555.1| F0F1 ATP synthase subunit beta [Thiobacillus denitrificans ATCC
           25259]
 gi|118573774|sp|Q3SF66|ATPB_THIDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|74058310|gb|AAZ98750.1| F-type H+-transporting ATP synthase, beta subunit [Thiobacillus
           denitrificans ATCC 25259]
          Length = 459

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 161/298 (54%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG P+D    +G  + +M I  K P   ++    +  +TGI+VID+  P+  G
Sbjct: 83  LGRIMNVLGDPVDEAGPIG-AETTMPIHRKAPAYADQAATVEILETGIKVIDLIMPIAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKS 217
            ++G+F G+G+GK+  L    R+        S+   VGER RE  +F  +   G  L K 
Sbjct: 142 GKVGLFGGAGVGKTVTLMELIRNIAVQHSGFSVFAGVGERTREGNDFYHEMKEGGVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  + G+IT+  +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLADEMGRLQERI--TSTKTGSITSFQAVYVPADDLTDPSPATTFAHLDATLV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR+ D     +E   V+  +   + +++E RDI  I G
Sbjct: 320 LSRQVAELGIYPAVDPLDSTSRILDPQVVGEEHYTVARKVQGTLQKYKELRDIIAILG 377


>gi|242310682|ref|ZP_04809837.1| ATP synthase subunit beta [Helicobacter pullorum MIT 98-5489]
 gi|239523080|gb|EEQ62946.1| ATP synthase subunit beta [Helicobacter pullorum MIT 98-5489]
          Length = 467

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G  IDG + L   +    I    P   N+    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVTGDVIDGGEELNNPE-KWSIHRAAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L K 
Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D     +E  K+ +S+  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEEHYKIATSVQQVLQKYKDLQDIIAILG 382


>gi|308274352|emb|CBX30951.1| ATP synthase subunit beta [uncultured Desulfobacterium sp.]
          Length = 472

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+N +G+P+DG   + + D  M I  + P    +    +  +TG++VID+  P  
Sbjct: 90  AGLGRVLNVVGRPVDGLGPVSQ-DKMMPIHREAPKFTEQDTTVRVLETGVKVIDLLVPFP 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ ++     +       IS+   VGER RE  +   +      L 
Sbjct: 149 RGGKMGMFGGAGVGKTVIMMEMVHNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVLP 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ ++     E P  R    LTA+T AEY+   +G +VL+ +D+I RF  +  E++   G
Sbjct: 209 KAALIYGQMTEPPGARARVALTALTAAEYYRDIEGQDVLIFIDNIFRFTQAGSEVSALLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  +L  L ERI  +  +KG+ITAV  V V  D+  DP   +  + LDG
Sbjct: 269 RMPSAVGYQPTLAVDLGELQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFAHLDG 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP VDPL S SR+ D ++  +E   VS ++  ++ +++E +DI  I 
Sbjct: 327 TVVLSRQIAELGIYPAVDPLDSTSRILDASYIGEEHYGVSRTVQQILQKYKELQDIIAIL 386

Query: 394 G 394
           G
Sbjct: 387 G 387


>gi|227513066|ref|ZP_03943115.1| F0F1 ATP synthase subunit beta [Lactobacillus buchneri ATCC 11577]
 gi|227083641|gb|EEI18953.1| F0F1 ATP synthase subunit beta [Lactobacillus buchneri ATCC 11577]
          Length = 487

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG    G       I  + P         +  +TGI+VID+  P   G
Sbjct: 93  LGRVFNVLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   L K+
Sbjct: 153 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 213 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD   
Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
            L RSL ++G YP VDPLAS S   D      E   + + + H++ R+ E +DI  I   
Sbjct: 331 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISI--- 387

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V++   I  FL QS
Sbjct: 388 -LGMDELSDEEKTIVNRARRIQFFLSQS 414


>gi|227524281|ref|ZP_03954330.1| F0F1 ATP synthase subunit beta [Lactobacillus hilgardii ATCC 8290]
 gi|227088512|gb|EEI23824.1| F0F1 ATP synthase subunit beta [Lactobacillus hilgardii ATCC 8290]
          Length = 487

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG    G       I  + P         +  +TGI+VID+  P   G
Sbjct: 93  LGRVFNVLGEPIDGGPEFGSDAERWPIHREAPKYDELSPSTEILETGIKVIDLLEPYIRG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   L K+
Sbjct: 153 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 213 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD   
Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
            L RSL ++G YP VDPLAS S   D      E   + + + H++ R+ E +DI  I   
Sbjct: 331 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISI--- 387

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V++   I  FL QS
Sbjct: 388 -LGMDELSDEEKTIVNRARRIQFFLSQS 414


>gi|237751983|ref|ZP_04582463.1| ATP synthase subunit beta [Helicobacter winghamensis ATCC BAA-430]
 gi|229376550|gb|EEO26641.1| ATP synthase subunit beta [Helicobacter winghamensis ATCC BAA-430]
          Length = 467

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G  IDG + L   +    I    P   N+    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVTGDVIDGGEELNNPE-KWSIHRSAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L K 
Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D     +E  K+ +S+  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEEHYKVATSVQQVLQKYKDLQDIIAILG 382


>gi|28193539|emb|CAD48597.1| F1F0-ATPase subunit beta [Lactobacillus hilgardii]
          Length = 481

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 154/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG    G       I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   L K+
Sbjct: 147 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL ++G YP VDPLAS S   D      E   + + + H++ R+ E +DI
Sbjct: 325 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDI 378


>gi|227510137|ref|ZP_03940186.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190342|gb|EEI70409.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 487

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 154/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG    G       I  + P         +  +TGI+VID+  P   G
Sbjct: 93  LGRVFNVLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +       IS+   VGER RE  +   +  G   L K+
Sbjct: 153 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 213 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD   
Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL ++G YP VDPLAS S   D      E   + + + H++ R+ E +DI
Sbjct: 331 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDI 384


>gi|118445003|ref|YP_878996.1| F0F1 ATP synthase subunit beta [Clostridium novyi NT]
 gi|171472992|sp|A0Q2Z4|ATPB_CLONN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118135459|gb|ABK62503.1| ATP synthase F1, beta subunit [Clostridium novyi NT]
          Length = 464

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+ N LGK ID +     G+   E    + +  P    Q VE + F+TGI+VID+  P
Sbjct: 88  LGRLFNVLGKTIDEE-----GEFKAEEYYPIHRPAPTFEEQSVEPEMFETGIKVIDLIAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      
Sbjct: 143 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGV 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K+ +V    +E P  R    LT +T+AEYF  +G NVLL +D+I RF  +  E++   
Sbjct: 203 INKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQNVLLFIDNIFRFTQAGSEVSALL 262

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 263 GRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFAHLD 320

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
              VL+RS+AE G YP VDPL S SR+ D      E   V+ ++ H++ R++E +DI  I
Sbjct: 321 ATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDVAINVKHILERYKELQDIIAI 380

Query: 393 GG 394
            G
Sbjct: 381 LG 382


>gi|224370583|ref|YP_002604747.1| F0F1 ATP synthase subunit beta [Desulfobacterium autotrophicum
           HRM2]
 gi|223693300|gb|ACN16583.1| AtpD2 [Desulfobacterium autotrophicum HRM2]
          Length = 472

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 163/302 (53%), Gaps = 9/302 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV+N +GKP+DG   + + ++ M I    P   ++    +  +TG++V+D+  P 
Sbjct: 89  AASLGRVLNVVGKPVDGLGPISQENM-MPIHRLAPSFTSQDTTVRVLETGVKVVDLLVPF 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ ++     +       IS+   VGER RE  +   +      L
Sbjct: 148 PRGGKMGMFGGAGVGKTVIMMEMVNNIAMQHGGISVFGGVGERTREGNDLYHEMKDSGVL 207

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V     E P  R    L+A+T AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 208 PKCSLVYGQMTEPPGARARVALSALTCAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSATL 267

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  ++  L ERI  +  +KG+ITAV  V V  D+  DP   +  + LD
Sbjct: 268 GRMPSAVGYQPTLAVDMGALQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFAHLD 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRLI 392
           G +VL+R +AE G YP VDPL S SR+ D A+  +E   V+ +    + +++E +DI  I
Sbjct: 326 GTVVLSRQIAELGIYPAVDPLDSTSRILDAAYVGEEHYNVARVVQQTLQKYKELQDIIAI 385

Query: 393 GG 394
            G
Sbjct: 386 LG 387


>gi|270291020|ref|ZP_06197243.1| ATP synthase F1, beta subunit [Pediococcus acidilactici 7_4]
 gi|304385296|ref|ZP_07367641.1| ATP synthase F1 sector beta subunit [Pediococcus acidilactici DSM
           20284]
 gi|270280416|gb|EFA26251.1| ATP synthase F1, beta subunit [Pediococcus acidilactici 7_4]
 gi|304328503|gb|EFL95724.1| ATP synthase F1 sector beta subunit [Pediococcus acidilactici DSM
           20284]
          Length = 469

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 165/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
            GRV N LG+ IDG   LG  D+  + + + PP  +      +  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGETIDGGKELGP-DIKRDPIHRDPPEYDELNPSTEILETGIKVIDLLAPYIR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L++
Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKESGVLER 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAE+F   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTIAEHFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             L RSL ++G YP VDPLAS S   D     +E  ++ S + H++ R++E +DI
Sbjct: 324 TNLERSLTQQGIYPAVDPLASTSTALDPEIVGEEHYEVASEVQHVLQRYKELQDI 378


>gi|168185932|ref|ZP_02620567.1| ATP synthase F1, beta subunit [Clostridium botulinum C str. Eklund]
 gi|169295978|gb|EDS78111.1| ATP synthase F1, beta subunit [Clostridium botulinum C str. Eklund]
          Length = 464

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+ N LGK ID +     G+   E    + +  P    Q VE + F+TGI+VID+  P
Sbjct: 88  LGRLFNVLGKTIDEE-----GEFKAEEYYPIHRPAPTFEEQSVEPEMFETGIKVIDLVAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      
Sbjct: 143 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGV 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K+ +V    +E P  R    LT +T+AEYF  +G NVLL +D+I RF  +  E++   
Sbjct: 203 INKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQNVLLFIDNIFRFTQAGSEVSALL 262

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 263 GRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFAHLD 320

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
              VL+RS+AE G YP VDPL S SR+ D      E   V+ ++ H++ R++E +DI  I
Sbjct: 321 ATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDVAINVKHILERYKELQDIIAI 380

Query: 393 GG 394
            G
Sbjct: 381 LG 382


>gi|309806269|ref|ZP_07700282.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 03V1-b]
 gi|312873828|ref|ZP_07733871.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2052A-d]
 gi|308167253|gb|EFO69419.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 03V1-b]
 gi|311090610|gb|EFQ49011.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2052A-d]
          Length = 489

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149
           G   +       GRV N LG PIDG   +   D+  + + K  P  N     E+  +TGI
Sbjct: 85  GPISVPVGKATLGRVFNVLGDPIDGGPEIAD-DIQRDGIHKDAPKYNDLSTSEEILETGI 143

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205
           +VID+  P   G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + +
Sbjct: 144 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 203

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            E      L K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 204 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383
             +  + LD    L R L E+G YP VDPL S S   D +    D  ++   + H++ R+
Sbjct: 322 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 381

Query: 384 EETRDI 389
           +E +DI
Sbjct: 382 QELQDI 387


>gi|309809937|ref|ZP_07703785.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 2503V10-D]
 gi|308169725|gb|EFO71770.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 2503V10-D]
          Length = 489

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149
           G   +       GRV N LG PIDG   +   D+  + + K  P  N     E+  +TGI
Sbjct: 85  GPISVPVGKATLGRVFNVLGAPIDGGPEIAD-DVQRDGIHKDAPKYNDLSTSEEILETGI 143

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205
           +VID+  P   G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + +
Sbjct: 144 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 203

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            E      L K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 204 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383
             +  + LD    L R L E+G YP VDPL S S   D +    D  ++   + H++ R+
Sbjct: 322 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 381

Query: 384 EETRDI 389
           +E +DI
Sbjct: 382 QELQDI 387


>gi|38906121|gb|AAR27813.1| ATP synthase beta chain [Lactobacillus crispatus]
          Length = 371

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 28  LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 88  GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E    R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 148 AMVFGQMNEPXGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 266 NLERSLVEQGIYPAVDPLESTSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 319


>gi|302191117|ref|ZP_07267371.1| F0F1 ATP synthase subunit beta [Lactobacillus iners AB-1]
 gi|309803208|ref|ZP_07697305.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 11V1-d]
 gi|312871593|ref|ZP_07731685.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 3008A-a]
 gi|308164716|gb|EFO66966.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 11V1-d]
 gi|311092818|gb|EFQ51170.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 3008A-a]
          Length = 480

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149
           G   +       GRV N LG PIDG   +   D+  + + K  P  N     E+  +TGI
Sbjct: 76  GPISVPVGKATLGRVFNVLGDPIDGGPEIAD-DVQRDGIHKDAPKYNDLSTSEEILETGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205
           +VID+  P   G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + +
Sbjct: 135 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 194

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            E      L K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 195 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383
             +  + LD    L R L E+G YP VDPL S S   D +    D  ++   + H++ R+
Sbjct: 313 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 372

Query: 384 EETRDI 389
           +E +DI
Sbjct: 373 QELQDI 378


>gi|148543702|ref|YP_001271072.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri DSM 20016]
 gi|184153112|ref|YP_001841453.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri JCM 1112]
 gi|194468265|ref|ZP_03074251.1| ATP synthase F1, beta subunit [Lactobacillus reuteri 100-23]
 gi|227363319|ref|ZP_03847448.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri MM2-3]
 gi|227544493|ref|ZP_03974542.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri CF48-3A]
 gi|300909319|ref|ZP_07126780.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri SD2112]
 gi|325682073|ref|ZP_08161591.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri MM4-1A]
 gi|166990370|sp|A5VIR1|ATPB_LACRD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740212|sp|B2G691|ATPB_LACRJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148530736|gb|ABQ82735.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus reuteri DSM
           20016]
 gi|183224456|dbj|BAG24973.1| ATP synthase beta subunit [Lactobacillus reuteri JCM 1112]
 gi|194453118|gb|EDX42016.1| ATP synthase F1, beta subunit [Lactobacillus reuteri 100-23]
 gi|227071626|gb|EEI09920.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri MM2-3]
 gi|227185516|gb|EEI65587.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri CF48-3A]
 gi|300893184|gb|EFK86543.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri SD2112]
 gi|324978717|gb|EGC15666.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri MM4-1A]
          Length = 475

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+P+D     G     M I    P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDDLNNATEILETGIKVIDLLAPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      L+K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPLAS S  L  +    +  ++ + + H++ R+ E +DI  I   
Sbjct: 325 NLERRLTQIGIYPAVDPLASTSTALTPEIVGKEHYEVATQVQHVLQRYHELQDIISI--- 381

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V +   I +FL QS
Sbjct: 382 -LGMDELSDEEKTIVARARRIQNFLSQS 408


>gi|83591194|ref|YP_431203.1| F0F1 ATP synthase subunit beta [Moorella thermoacetica ATCC 39073]
 gi|118573697|sp|Q2RFX9|ATPB_MOOTA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|83574108|gb|ABC20660.1| ATP synthase F1 subcomplex beta subunit [Moorella thermoacetica
           ATCC 39073]
          Length = 462

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 165/301 (54%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PID    +   +  + I    P    +Q   +  +TGI+V+D+  P  
Sbjct: 83  ATLGRLFNVLGEPIDNQGPVETTE-RLPIHRPAPSFEEQQPSTEVLETGIKVVDLLAPYA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+  ++     + S VGER RE  + ++E      L+
Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFSGVGERTREGNDLYLEMKESGVLE 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +  E++   G
Sbjct: 202 KTALVFGQMNEPPGARLRVGLTGLTMAEYFRDAEGQDVLLFIDNIFRFVQAGSEVSALLG 261

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 262 RMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 319

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D +    +  ++   +  ++ R++E +DI  I 
Sbjct: 320 TTVLSRQIAELGIYPAVDPLDSTSRILDPRVLGEEHYQVARGVQQVLQRYKELQDIIAIL 379

Query: 394 G 394
           G
Sbjct: 380 G 380


>gi|259501675|ref|ZP_05744577.1| ATP synthase F1 sector subunit beta [Lactobacillus iners DSM 13335]
 gi|309805661|ref|ZP_07699702.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 09V1-c]
 gi|309808087|ref|ZP_07702005.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 01V1-a]
 gi|312871960|ref|ZP_07732042.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2062A-h1]
 gi|312874636|ref|ZP_07734660.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2053A-b]
 gi|315653738|ref|ZP_07906658.1| ATP synthase F1 sector beta subunit [Lactobacillus iners ATCC
           55195]
 gi|325911661|ref|ZP_08174068.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 143-D]
 gi|325912991|ref|ZP_08175364.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 60-B]
 gi|329921084|ref|ZP_08277607.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 1401G]
 gi|259166960|gb|EEW51455.1| ATP synthase F1 sector subunit beta [Lactobacillus iners DSM 13335]
 gi|308165021|gb|EFO67263.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 09V1-c]
 gi|308168689|gb|EFO70789.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 01V1-a]
 gi|311089866|gb|EFQ48286.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2053A-b]
 gi|311092537|gb|EFQ50899.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2062A-h1]
 gi|315489100|gb|EFU78742.1| ATP synthase F1 sector beta subunit [Lactobacillus iners ATCC
           55195]
 gi|325476427|gb|EGC79586.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 143-D]
 gi|325477671|gb|EGC80810.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 60-B]
 gi|328934991|gb|EGG31480.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 1401G]
          Length = 489

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149
           G   +       GRV N LG PIDG   +   D+  + + K  P  N     E+  +TGI
Sbjct: 85  GPISVPVGKATLGRVFNVLGDPIDGGPEIAD-DVQRDGIHKDAPKYNDLSTSEEILETGI 143

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205
           +VID+  P   G ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + +
Sbjct: 144 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 203

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            E      L K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 204 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383
             +  + LD    L R L E+G YP VDPL S S   D +    D  ++   + H++ R+
Sbjct: 322 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 381

Query: 384 EETRDI 389
           +E +DI
Sbjct: 382 QELQDI 387


>gi|323466857|gb|ADX70544.1| Proton-translocating ATPase beta subunit [Lactobacillus helveticus
           H10]
          Length = 479

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG     K      I    P   +     +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPDFPKDHPREGIHKDAPKYADLTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGREHYEVATRVQHVLQRYHELQDI 378


>gi|223983270|ref|ZP_03633463.1| hypothetical protein HOLDEFILI_00743 [Holdemania filiformis DSM
           12042]
 gi|223964763|gb|EEF69082.1| hypothetical protein HOLDEFILI_00743 [Holdemania filiformis DSM
           12042]
          Length = 467

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 162/298 (54%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  IDG   L + +  + I    P    +    +  +TGI+VID+  P   G 
Sbjct: 89  GRMFNVLGDEIDGLGELPEPNKKLPIHRAAPSFEEQLTSAEILETGIKVIDLLCPYARGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+     +   +     +++ VGER RE  +   +      L K+V
Sbjct: 149 KIGLFGGAGVGKTVLMQELIHNIAKEHGGMSVVAGVGERTREGNDMYHEMKDSGVLDKTV 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +ESP  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 209 LVYGQMNESPGARMRVALSGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+ +L ERI  +  ++G+IT+V ++ V  D+  DP   +  S LD   V
Sbjct: 269 SAVGYQPTLATEMGQLQERI--TSTKRGSITSVQAIYVPADDLTDPAPATTFSHLDAKTV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+A  G YP VDPL S SR+ D     DE  ++   +  L+ R++E +DI  I G
Sbjct: 327 LDRSIAALGIYPAVDPLESSSRMLDPLVVGDEHYEVARGVQQLLQRYKELQDIIAILG 384


>gi|254447640|ref|ZP_05061106.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015]
 gi|198262983|gb|EDY87262.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015]
          Length = 457

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 175/333 (52%), Gaps = 11/333 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G+ E +S G  V + G     P      GR++N LG+PID    + K D +  
Sbjct: 48  VVRTIAMGVSEGLSRGVNVENTGSAISVPVGQGTLGRIMNVLGEPIDHAGDV-KSDETRA 106

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  + P   ++    +  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 107 IHQEAPSYEDQSASSELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 166

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
                 V    VGER RE  +F  +    N L K  +V    +E P  R    LT +T+A
Sbjct: 167 EHSGFSVFAG-VGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMA 225

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  
Sbjct: 226 EFFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 283

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V +V V  D+  DP   +  + LD  +VLNRS+AE G YP VDPL S SR  D
Sbjct: 284 KTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRSIAELGIYPAVDPLDSTSRQLD 343

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                DE  ++  ++   + R++E +DI  I G
Sbjct: 344 PLVVGDEHYEIARAVQGTLQRYKELKDIIAILG 376


>gi|307547034|ref|YP_003899513.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581]
 gi|307219058|emb|CBV44328.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581]
          Length = 458

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/300 (34%), Positives = 162/300 (54%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +  M I  K P   ++   E+  +TGI+VID+  P  
Sbjct: 80  ATLGRIMNVLGEPIDEAGEIGEQE-RMPIHRKAPGYADQAATEELLETGIKVIDLVCPFA 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMQESNVLD 198

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 199 KVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 258

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  
Sbjct: 259 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 316

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL RS+AE G YP +DPL S SR  D     +E  K+   +  ++ R++E +DI  I G
Sbjct: 317 VVLARSIAELGIYPAIDPLDSTSRQLDPLVIGEEHYKVARGVQGVLQRYKELKDIIAILG 376


>gi|153940743|ref|YP_001389519.1| F0F1 ATP synthase subunit beta [Clostridium botulinum F str.
           Langeland]
 gi|170756277|ref|YP_001779784.1| F0F1 ATP synthase subunit beta [Clostridium botulinum B1 str. Okra]
 gi|190358657|sp|B1IE34|ATPB_CLOBK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358658|sp|A7G9Q9|ATPB_CLOBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|152936639|gb|ABS42137.1| ATP synthase F1, beta subunit [Clostridium botulinum F str.
           Langeland]
 gi|169121489|gb|ACA45325.1| ATP synthase F1, beta subunit [Clostridium botulinum B1 str. Okra]
 gi|295317619|gb|ADF97996.1| ATP synthase F1, beta subunit [Clostridium botulinum F str. 230613]
          Length = 463

 Score =  159 bits (402), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 166/302 (54%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LGKPIDG      G+ + E    + +  P+   Q VE   F+TGI+VID+  P
Sbjct: 86  LGRLFNVLGKPIDG-----AGEFTSEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      
Sbjct: 141 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGV 200

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+K+ +V    +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   
Sbjct: 201 LEKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALL 260

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 261 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLD 318

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
              VL+R++ E G YP VDPL S SR+ D     +E   V+  + +++ R+ E +DI  I
Sbjct: 319 ATTVLSRAITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAI 378

Query: 393 GG 394
            G
Sbjct: 379 LG 380


>gi|289668190|ref|ZP_06489265.1| type III secretion system ATPase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 277

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 3/216 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           +V+  + D+  + P G    +S    V   GR    P      GRV++ LG+P DG  ++
Sbjct: 63  EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPADGLGAV 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            + +  + + ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ 
Sbjct: 123 -ECETWVRVQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A    
Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGEDGLSRSVVVCATSDRSSIERAKAAYVG 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
             IAEYF  +G  VLL++DS+TRFA + REI    G
Sbjct: 242 TAIAEYFRDQGMRVLLMMDSLTRFARAQREIGLAGG 277


>gi|254479260|ref|ZP_05092603.1| ATP synthase F1, beta subunit [Carboxydibrachium pacificum DSM
           12653]
 gi|214034798|gb|EEB75529.1| ATP synthase F1, beta subunit [Carboxydibrachium pacificum DSM
           12653]
          Length = 461

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 166/301 (55%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID    LG+  D+    + K PP+   Q    +  +TGI+VID+ TP  
Sbjct: 84  LGRMFNVLGQPID---ELGEVKDVKYMPIHKKPPSFEEQNPATEILETGIKVIDLLTPYP 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  E ++E +    + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFAGVGERSREGNELWLEMHEAGVID 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+  V    +E P  R    L  +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTIAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 261 RMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ +     +E   V+  +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|297544153|ref|YP_003676455.1| ATP synthase F1 subunit beta [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841928|gb|ADH60444.1| ATP synthase F1, beta subunit [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 461

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID    LG+  D+  M I  K PP   +    +  +TGI+VID+ TP  
Sbjct: 84  LGRMFNVLGQPID---ELGEVNDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  E   +      L 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMQESGVLD 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+  V    +E P  R    L  +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 201 KAAFVFGQMNEPPGARMRVALAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +EL  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 261 RMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ +     +E   V+  +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYSVARKVQEILERYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|289577864|ref|YP_003476491.1| ATP synthase F1 subunit beta [Thermoanaerobacter italicus Ab9]
 gi|289527577|gb|ADD01929.1| ATP synthase F1, beta subunit [Thermoanaerobacter italicus Ab9]
          Length = 461

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID    LG+  D+  M I  K PP   +    +  +TGI+VID+ TP  
Sbjct: 84  LGRMFNVLGQPID---ELGEVNDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  E   +      L 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMQESGVLD 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+  V    +E P  R    L  +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 201 KTAFVFGQMNEPPGARMRVALAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +EL  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 261 RMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ +     +E   V+  +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYSVARKVQEILERYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|20807130|ref|NP_622301.1| F0F1 ATP synthase subunit beta [Thermoanaerobacter tengcongensis
           MB4]
 gi|81848163|sp|Q8RC15|ATPB_THETN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|20515625|gb|AAM23905.1| F0F1-type ATP synthase beta subunit [Thermoanaerobacter
           tengcongensis MB4]
          Length = 461

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 166/301 (55%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID    LG+  D+    + K PP+   Q    +  +TGI+VID+ TP  
Sbjct: 84  LGRMFNVLGQPID---ELGEVKDVKYMPIHKKPPSFEEQNPATEILETGIKVIDLLTPYP 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  E ++E +    + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFAGVGERSREGNELWLEMHEAGVID 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+  V    +E P  R    L  +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTIAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 261 RMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ +     +E   V+  +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|300811317|ref|ZP_07091814.1| ATP synthase F1, beta subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497681|gb|EFK32706.1| ATP synthase F1, beta subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 479

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG            I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPEFPAAHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E   V++ + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 378


>gi|170759729|ref|YP_001785485.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A3 str. Loch
           Maree]
 gi|190358659|sp|B1KSS8|ATPB_CLOBM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169406718|gb|ACA55129.1| ATP synthase F1, beta subunit [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 463

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 165/301 (54%), Gaps = 14/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
            GR+ N LGKPIDG        +S E   + +  P+   Q VE   F+TGI+VID+  P 
Sbjct: 86  LGRLFNVLGKPIDGAGEF----ISEESYPIHRSAPSFEEQSVEPEIFETGIKVIDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      L
Sbjct: 142 QKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVL 201

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           +K+ +V    +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G
Sbjct: 202 EKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLG 261

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 262 RIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 319

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+ E G YP VDPL S SR+ D     +E   V+  + +++ R+ E +DI  I 
Sbjct: 320 TTVLSRSITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAIL 379

Query: 394 G 394
           G
Sbjct: 380 G 380


>gi|325125459|gb|ADY84789.1| ATP synthase beta subunit [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 479

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG            I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E   V++ + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 378


>gi|116513801|ref|YP_812707.1| F0F1 ATP synthase subunit beta [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275429|sp|Q04BA3|ATPB_LACDB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116093116|gb|ABJ58269.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
          Length = 479

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG            I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E   V++ + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 378


>gi|116493065|ref|YP_804800.1| F0F1 ATP synthase subunit beta [Pediococcus pentosaceus ATCC 25745]
 gi|122265471|sp|Q03EL4|ATPB_PEDPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116103215|gb|ABJ68358.1| ATP synthase F1 subcomplex beta subunit [Pediococcus pentosaceus
           ATCC 25745]
          Length = 469

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
            GRV N LG  IDG   LG  D+  + + + PP  +      +  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDTIDGGKELGP-DIKRDPIHRDPPDYDELNPSTEVLETGIKVIDLLAPYIR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +  G   L++
Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKGSGVLER 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAE+F   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTIAEHFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             L R+L ++G YP VDPLAS S   D     +E  ++ + + H++ R++E +DI
Sbjct: 324 TNLERALTQQGIYPAVDPLASTSTALDPQIVGEEHYEVATEVQHVLQRYKELQDI 378


>gi|28625013|emb|CAD56145.1| F1F0-ATPase subunit beta [Pediococcus damnosus]
          Length = 470

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 161/295 (54%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG  ID  +  G  +     + + PP  +      +  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGDTIDNGEEFGP-EAKRNPIHRDPPKYDELNPSMEILETGIKVIDLLAPYIR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+K
Sbjct: 146 GGKVGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLEK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             L RSL ++G YP VDPLAS S   D A   +E  K+ + + H++ R+ E +DI
Sbjct: 324 TNLERSLTQQGIYPAVDPLASTSSALDPAVVGEEHYKVATDVQHVLQRYRELQDI 378


>gi|193216472|ref|YP_001999714.1| F0F1 ATP synthase subunit beta [Mycoplasma arthritidis 158L3-1]
 gi|193001795|gb|ACF07010.1| ATP synthase beta subunit [Mycoplasma arthritidis 158L3-1]
          Length = 503

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 167/299 (55%), Gaps = 14/299 (4%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           R+ N LG+PID     G  + ++++ + + PP+   Q+   + F+TGI+VID+  P   G
Sbjct: 122 RMFNVLGEPID----TGAIEFNVKMPIHRTPPSYEEQKSTLEIFETGIKVIDLLMPYVKG 177

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      L K+
Sbjct: 178 GKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFAGVGERTREGNDLYHEMKASGVLDKT 237

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R  AP TA+T+AEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 238 ALVFGQMNEPPGARMRAPFTALTMAEYFRDTMGQDVLLFIDNIFRFTQAGSEVSALLGRM 297

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG++T+V ++ V  D+  DP   +  + LD   
Sbjct: 298 PSAVGYQPTLATEMGQLQERI--TSTNKGSVTSVQAIYVPADDLTDPAPATTFTHLDAKT 355

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +A  G YP +DPLAS SR+ D      +   +   + +++ RF+E +DI  I G
Sbjct: 356 VLDRDIAALGIYPAIDPLASNSRMMDPNVIGLEHYNIARKVQNILQRFKELQDIIAILG 414


>gi|78043094|ref|YP_361338.1| F0F1 ATP synthase subunit beta [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|118573518|sp|Q3A946|ATPB_CARHZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77995209|gb|ABB14108.1| ATP synthase F1, beta subunit [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 473

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 164/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PIDG   + + D    I    PP   +    +  +TGI+VID+  P   G
Sbjct: 93  LGRLLNVLGEPIDGKGPV-ESDHYYPIHRPAPPLEEQSTRAEILETGIKVIDLLVPFLKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKS 217
            +IG+F G+G+GK+ ++     +       IS+   VGER RE  +   +      L K+
Sbjct: 152 GKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLDKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++V    +E P +R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 212 IMVFGQMNEPPGVRLRVGLTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 272 PSAVGYQPTLATEMGQLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDATV 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     +E  ++   +  ++ R++E +DI  I G
Sbjct: 330 VLSRQIAELGIYPAVDPLDSTSRILDPHIVGEEHYQVARGVQRVLQRYKELQDIIAILG 388


>gi|148378162|ref|YP_001252703.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. ATCC
           3502]
 gi|153930870|ref|YP_001382563.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A str. ATCC
           19397]
 gi|153935797|ref|YP_001386115.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A str. Hall]
 gi|168177489|ref|ZP_02612153.1| ATP synthase F1, beta subunit [Clostridium botulinum NCTC 2916]
 gi|168182234|ref|ZP_02616898.1| ATP synthase F1, beta subunit [Clostridium botulinum Bf]
 gi|237793475|ref|YP_002861027.1| ATP synthase F1, beta subunit [Clostridium botulinum Ba4 str. 657]
 gi|190358654|sp|A7FQH9|ATPB_CLOB1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358656|sp|A5HY52|ATPB_CLOBH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585441|sp|C3KYJ3|ATPB_CLOB6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148287646|emb|CAL81711.1| ATP synthase beta chain [Clostridium botulinum A str. ATCC 3502]
 gi|152926914|gb|ABS32414.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. ATCC
           19397]
 gi|152931711|gb|ABS37210.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. Hall]
 gi|182671405|gb|EDT83379.1| ATP synthase F1, beta subunit [Clostridium botulinum NCTC 2916]
 gi|182674532|gb|EDT86493.1| ATP synthase F1, beta subunit [Clostridium botulinum Bf]
 gi|229260674|gb|ACQ51707.1| ATP synthase F1, beta subunit [Clostridium botulinum Ba4 str. 657]
 gi|322804426|emb|CBZ01976.1| ATP synthase beta chain [Clostridium botulinum H04402 065]
          Length = 463

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 165/301 (54%), Gaps = 14/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
            GR+ N LGKPIDG        +S E   + +  P+   Q VE   F+TGI+VID+  P 
Sbjct: 86  LGRLFNVLGKPIDGAGEF----ISEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      L
Sbjct: 142 QKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVL 201

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           +K+ +V    +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G
Sbjct: 202 EKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLG 261

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 262 RIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 319

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+ E G YP VDPL S SR+ D     +E   V+  + +++ R+ E +DI  I 
Sbjct: 320 TTVLSRSITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAIL 379

Query: 394 G 394
           G
Sbjct: 380 G 380


>gi|313123407|ref|YP_004033666.1| fof1 membrane-bound proton-translocating ATPase beta subunit
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312279970|gb|ADQ60689.1| FoF1 membrane-bound proton-translocating ATPase beta subunit
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 479

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG            I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGSEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E   V++ + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGQEHYDVATRVQHILQRYRELQDI 378


>gi|32265928|ref|NP_859960.1| F0F1 ATP synthase subunit beta [Helicobacter hepaticus ATCC 51449]
 gi|81835987|sp|Q7VJ21|ATPB_HELHP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|32261977|gb|AAP77026.1| FoF1-type ATP synthase [Helicobacter hepaticus ATCC 51449]
          Length = 466

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G  IDG   L + DL   I  + P   N+    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVTGDVIDGGKPL-ESDLKWPIHREAPSFENQSTRTEMFETGIKVVDLIAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGSEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLAGEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-KKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++E+G YP VDPL S SR+ D     +E  K+ + +  ++ ++++ +DI  I G
Sbjct: 324 VLDRKISEKGIYPAVDPLGSTSRILDPQIVGEEHHKVATGVQQVLQKYKDLQDIIAILG 382


>gi|325684414|gb|EGD26582.1| ATP synthase F1 sector beta subunit [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 490

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG            I  + P         +  +TGI+VID+  P   G
Sbjct: 98  LGRVFNVLGQPIDGGSEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 158 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 217

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 218 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 277

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 278 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 335

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E   V++ + H++ R+ E +DI
Sbjct: 336 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 389


>gi|325479324|gb|EGC82420.1| ATP synthase ab C terminal domain protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 454

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 187/356 (52%), Gaps = 23/356 (6%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID 114
           D +GQV++I+ D V I   G  EE SL D+V  FH     I  +    GR  N +G+PID
Sbjct: 38  DFVGQVVKIDDDTVTIEVFGNTEEFSLNDIVVSFHEKPLEIPLNESILGRTFNGIGEPID 97

Query: 115 GDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
               +   +L S+E +   P A  R+      +TGI  ID  T L  GQ++ +F+GSG+ 
Sbjct: 98  NGGYIYSDELFSVEGLPLNPVA--REYPRDFIQTGISSIDTLTTLIRGQKLPIFSGSGLS 155

Query: 174 KSTLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD 225
            + + +   R          CF   + + +G +  E   F + +    ++  VV+     
Sbjct: 156 HNEIAAQIVRQAKLKTDEDFCF---VFAAMGIKKDEAMFFEDAFNKAGVRDKVVMYQNLA 212

Query: 226 ESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +SPI+ ++ AP  A+T AEY + K   +VL+I+  +T ++ ++RE+++  GE+P  +GYP
Sbjct: 213 DSPIMERLVAPKCALTAAEYLAYKKHYHVLVIITDMTSYSEALREVSSIRGEVPSRKGYP 272

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
             ++S+L  L ER G  E   G++T +  + +  D+   P+AD    I +G IV++RSL+
Sbjct: 273 GYLYSDLASLYERAGMIEGVNGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRSLS 332

Query: 344 EEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +G YPP++ L S+SRL      +     D + L++ +     + ++ R+I  I G
Sbjct: 333 NKGIYPPINVLPSLSRLMKDGIGEGYTRGDHEDLMNQIYESYSKVQDVRNISQIVG 388


>gi|307265810|ref|ZP_07547361.1| ATP synthase F1, beta subunit [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919205|gb|EFN49428.1| ATP synthase F1, beta subunit [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 461

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID    LG  K    M I  K PP   +    +  +TGI+VID+ TP  
Sbjct: 84  LGRMFNVLGQPID---ELGEVKDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  E + E +    + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMHESGVID 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+  V    +E P  R    L  +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +EL  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 261 RMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ +     +E   V+  +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|255022753|ref|ZP_05294739.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL J1-208]
          Length = 258

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/260 (39%), Positives = 151/260 (58%), Gaps = 9/260 (3%)

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I LVGERGREV++F+   LG+  L+KSV+V ATSDES +++  A   A
Sbjct: 1   MIARNAKADINVIGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLA 60

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAE+F  +G  VLL++DS+TRFA + R +     +LP+  G    + S + +LLER G
Sbjct: 61  TSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSG 119

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G+IT + +VLVDGD+ N P+ D  R ILDGHIVL R LA +  YP +D L+SVS
Sbjct: 120 KTKN--GSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLSSVS 177

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFL 417
           R+ ++     + K  S +   +  ++E      +G      D   +  +  +   I+ FL
Sbjct: 178 RVMEEIVPESQWKSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFL 237

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           KQ    L  E+V  + T KL
Sbjct: 238 KQ----LRDENVTLDETSKL 253


>gi|226947380|ref|YP_002802471.1| ATP synthase F1, beta subunit [Clostridium botulinum A2 str. Kyoto]
 gi|254808140|sp|C1FQP5|ATPB_CLOBJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226842430|gb|ACO85096.1| ATP synthase F1, beta subunit [Clostridium botulinum A2 str. Kyoto]
          Length = 463

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 165/301 (54%), Gaps = 14/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
            GR+ N LGKPIDG        +S E   + +  P+   Q VE   F+TGI+VID+  P 
Sbjct: 86  LGRLFNVLGKPIDGAGEF----ISEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      L
Sbjct: 142 EKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVL 201

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           +K+ +V    +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G
Sbjct: 202 EKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLG 261

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 262 RIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 319

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+ E G YP VDPL S SR+ D     +E   V+  + +++ R+ E +DI  I 
Sbjct: 320 TTVLSRSITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAIL 379

Query: 394 G 394
           G
Sbjct: 380 G 380


>gi|162419059|ref|YP_001604854.1| flagellum-specific ATP synthase [Yersinia pestis Angola]
 gi|162351874|gb|ABX85822.1| flagellum-specific ATP synthase [Yersinia pestis Angola]
          Length = 389

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 165/362 (45%), Gaps = 63/362 (17%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117
           QV+  + DI Y+ P      +  G  VF     G   I  S  W GRVIN LG+P+DG  
Sbjct: 60  QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPLDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG      + + ++ P + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS L
Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           L M  R                                  VVV A +DESP++R  A   
Sbjct: 177 LGMITRY----------------------------TQADVVVVAAPADESPLMRIKATEL 208

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              IA Y+  KG +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  
Sbjct: 209 CHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESA 268

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S    G +TA+ +V                            LAE G YP +D   S+
Sbjct: 269 GNSSG-NGTMTAIYTV----------------------------LAEAGHYPAIDISQSI 299

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +   + + K  S L      +   + +  +GGY  G D + D+AVH  P I  FL
Sbjct: 300 SRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQFL 359

Query: 418 KQ 419
           +Q
Sbjct: 360 RQ 361


>gi|187251924|ref|YP_001876406.1| F0F1 ATP synthase subunit beta [Elusimicrobium minutum Pei191]
 gi|186972084|gb|ACC99069.1| ATP synthase F1, beta subunit [Elusimicrobium minutum Pei191]
          Length = 484

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 167/313 (53%), Gaps = 20/313 (6%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDI 154
           P    C GR++N LG PID    + K D  M I  + PP +  Q+     F+TGI+V+D+
Sbjct: 79  PVGEGCRGRLMNVLGAPIDYAGEI-KTDKKMPI-HREPPTLEEQKTTPEIFETGIKVVDL 136

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL 210
             P   G ++G+F G+G+GK+ L+    +  AR      V    VGER RE  +   D  
Sbjct: 137 LAPYMKGGKVGLFGGAGVGKTVLIMELINNVAREHSGSSVF-GGVGERSREGNDLWLDMK 195

Query: 211 GDNLK-------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
           G  L        K+V+V    +E P  R    LTA+T AEYF   KG +VLL LD+I R+
Sbjct: 196 GAELADGSTVLDKTVLVFGQMNEPPGARAKVALTALTQAEYFRDEKGQDVLLFLDNIFRY 255

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D+  D
Sbjct: 256 VLANSEVSALLGRMPSAVGYQPTLNTEIGQLQERI--TSTNKGSITSIQAVYVPADDLTD 313

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIH 381
           P   S  + LD   VL+RSL E G YP VDPL S SR+ D +    +  ++   +  ++ 
Sbjct: 314 PGVASTFTHLDATTVLSRSLVELGIYPAVDPLESTSRILDPRVLGEEHYQVAQGVRKILQ 373

Query: 382 RFEETRDIRLIGG 394
           R+++ +D+  I G
Sbjct: 374 RYKDLQDLIAILG 386


>gi|297205778|ref|ZP_06923173.1| ATP synthase F1 sector beta subunit [Lactobacillus jensenii JV-V16]
 gi|297148904|gb|EFH29202.1| ATP synthase F1 sector beta subunit [Lactobacillus jensenii JV-V16]
          Length = 480

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID             I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +ESP  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNESPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D     +E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378


>gi|332561378|ref|ZP_08415693.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides WS8N]
 gi|332274177|gb|EGJ19494.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides WS8N]
          Length = 460

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 8/305 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G+P D    +        I+   PP   +    + F TGI+
Sbjct: 66  GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAEAPRAPILHPAPPLAAQDARFQVFSTGIK 125

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207
           V+D+  PL  G +  +F G+G+GK+ L+    R+    +D + + + VGER RE  E + 
Sbjct: 126 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 185

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +      L ++V+V    +E P  R   PLTA+TIAE F   +G NVLL++D++ RF  +
Sbjct: 186 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 245

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P   GY  ++ +E+  L ERI  +   + ++TA+ +V V  D+  DP  
Sbjct: 246 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 303

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            ++ + +D  +VL+R LA EG YP +DPLA+ S L D A   +E   V+  L   I  + 
Sbjct: 304 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 363

Query: 385 ETRDI 389
           E RD+
Sbjct: 364 ELRDV 368


>gi|221634553|ref|YP_002523241.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides KD131]
 gi|221163426|gb|ACM04388.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides KD131]
          Length = 460

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 8/305 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G+P D    +        I+   PP   +    + F TGI+
Sbjct: 66  GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAEAPRAPILHPAPPLAAQDARFQVFSTGIK 125

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207
           V+D+  PL  G +  +F G+G+GK+ L+    R+    +D + + + VGER RE  E + 
Sbjct: 126 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 185

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +      L ++V+V    +E P  R   PLTA+TIAE F   +G NVLL++D++ RF  +
Sbjct: 186 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 245

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P   GY  ++ +E+  L ERI  +   + ++TA+ +V V  D+  DP  
Sbjct: 246 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 303

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            ++ + +D  +VL+R LA EG YP +DPLA+ S L D A   +E   V+  L   I  + 
Sbjct: 304 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 363

Query: 385 ETRDI 389
           E RD+
Sbjct: 364 ELRDV 368


>gi|38906127|gb|AAR27816.1| ATP synthase beta chain [Lactobacillus acidophilus]
          Length = 371

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 157/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G
Sbjct: 28  LGRVFNVLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+  +T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 88  GKVGLFGGAGVATTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +DI
Sbjct: 266 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 319


>gi|126464835|ref|YP_001041811.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17029]
 gi|190358238|sp|A3PS59|ATPB2_RHOS1 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|126106650|gb|ABN79175.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17029]
          Length = 464

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 8/305 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G+P D    +        I+   PP   +    + F TGI+
Sbjct: 70  GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAEAPRAPILHPAPPLAAQDARFQVFSTGIK 129

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207
           V+D+  PL  G +  +F G+G+GK+ L+    R+    +D + + + VGER RE  E + 
Sbjct: 130 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 189

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +      L ++V+V    +E P  R   PLTA+TIAE F   +G NVLL++D++ RF  +
Sbjct: 190 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 249

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P   GY  ++ +E+  L ERI  +   + ++TA+ +V V  D+  DP  
Sbjct: 250 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 307

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            ++ + +D  +VL+R LA EG YP +DPLA+ S L D A   +E   V+  L   I  + 
Sbjct: 308 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 367

Query: 385 ETRDI 389
           E RD+
Sbjct: 368 ELRDV 372


>gi|308184872|ref|YP_003929005.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SJM180]
 gi|308060792|gb|ADO02688.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SJM180]
          Length = 469

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  +SL K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLESL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|332637150|ref|ZP_08416013.1| F0F1 ATP synthase subunit beta [Weissella cibaria KACC 11862]
          Length = 466

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 162/297 (54%), Gaps = 10/297 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GRV N LG P+DG ++LG+ D+  + + +  PA ++        +TGI+VID+  P 
Sbjct: 85  ATLGRVFNVLGNPVDGGEALGE-DVPRDPIHRDAPAYDQLATSTEILETGIKVIDLLAPY 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      L
Sbjct: 144 IRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMKDSGVL 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
           K++ +V    +E P  R    LT +TIAE+F    G +VLL +D+I RF  +  E++   
Sbjct: 204 KQTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVNGQDVLLFIDNIFRFTQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD
Sbjct: 264 GRIPSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAVYVPADDYTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
               L RSL ++G YP VDPLAS S  L  +    +  ++ + +   + R+ E +DI
Sbjct: 322 ATTNLERSLTQQGIYPAVDPLASTSTALTPEIVGQEHYEVATEVQRTLQRYRELQDI 378


>gi|150015308|ref|YP_001307562.1| F0F1 ATP synthase subunit beta [Clostridium beijerinckii NCIMB
           8052]
 gi|190358655|sp|A6LQH6|ATPB_CLOB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149901773|gb|ABR32606.1| ATP synthase F1, beta subunit [Clostridium beijerinckii NCIMB 8052]
          Length = 463

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 164/306 (53%), Gaps = 24/306 (7%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVID 153
            GR+ N LGKPID  GD         +E+  + P     P+   Q VE + F+TGI+V+D
Sbjct: 87  LGRLFNVLGKPIDKCGD---------IEVKQEYPIHRPAPSFKDQSVEPEMFETGIKVVD 137

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210
           +  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +  
Sbjct: 138 LLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKQHGGLSVFTGVGERSREGNDLYHEMR 197

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
               + K+ +V    +E P  R    LT +T+AEYF  KG +VLL +D+I R+  +  E+
Sbjct: 198 ESGVIDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRYTQAGSEV 257

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G  P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  
Sbjct: 258 SALLGRTPSAVGYQPTLATEMGALQERI--TSTVNGSITSVQAVYVPADDLTDPAPATTF 315

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D     +E  K+ + + H++ ++++ +D
Sbjct: 316 AHLDATTVLSRGIAELGIYPAVDPLESTSRILDPRIVGEEHYKVAADVKHVLEKYKQLQD 375

Query: 389 IRLIGG 394
           I  I G
Sbjct: 376 IIAILG 381


>gi|206890586|ref|YP_002248090.1| ATP synthase F1, beta subunit [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226740687|sp|B5YI24|ATPB_THEYD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|206742524|gb|ACI21581.1| ATP synthase F1, beta subunit [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 473

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+P+D    +   D    I    P    +    + F+TG++V D+  P   G
Sbjct: 92  LGRIINVIGEPVDEMGPIQAQD-KYPIHISAPEFTEQSPTTQQFETGVKVFDLLVPFVRG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +       +S+   VGER RE  + ++E      L + 
Sbjct: 151 GKMGMFGGAGVGKTVIIMEMIHNIAMKHGGVSVFAGVGERTREGNDLYLEMKHSGVLPQV 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P +R    LTA+T+AEYF  +G +VL+ +D+I R+  +  E++   G +P
Sbjct: 211 ALVYGQMNEPPGVRARIALTALTVAEYFRDQGQDVLIFIDNIFRYTLAGSEVSALLGRMP 270

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +   KG+IT++ ++ V  D+  DP   +V + LDG +V
Sbjct: 271 SAVGYQPTLSTEMGALQERI--TTTAKGSITSMQAIYVPADDLTDPAVAAVFAHLDGTVV 328

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR+ D     DE   V+  +  ++ R++E +DI  I G
Sbjct: 329 LSRQIAELGIYPAVDPLDSTSRILDPRVVGDEHYQVARGVQSVLQRYKELQDIIAILG 386


>gi|158520620|ref|YP_001528490.1| F0F1 ATP synthase subunit beta [Desulfococcus oleovorans Hxd3]
 gi|254808147|sp|A8ZUA1|ATPB_DESOH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158509446|gb|ABW66413.1| ATP synthase F1, beta subunit [Desulfococcus oleovorans Hxd3]
          Length = 467

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 162/302 (53%), Gaps = 9/302 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV+N +GKP+DG   + + + +M I    P    +       +TGI+VID+  P 
Sbjct: 89  AASLGRVLNVVGKPVDGLGPVSR-EKTMPIHRPAPLFTEQDTSVNVLETGIKVIDLLVPF 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ ++     +       IS+   VGER RE  +   +      L
Sbjct: 148 PRGGKMGLFGGAGVGKTVIMMEMVNNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVL 207

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K+ ++     E P  R    L+A+T AEYF   +G +VL+ +D+I RF  +  E++   
Sbjct: 208 PKAALIYGQMTEPPGARARVALSALTCAEYFRDVEGQDVLIFIDNIFRFTQAGAEVSALL 267

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  +L  L ERI  +  +KG+ITAV  V V  D+  DP   +  + LD
Sbjct: 268 GRIPSAVGYQPTLAVDLGGLQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFAHLD 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
           G +VL+R +AE G YP VDPL S SR+ D A+  +E  ++   +   + +++E +DI  I
Sbjct: 326 GTVVLSRQIAELGIYPSVDPLDSTSRILDAAYIGEEHYRVAREVQQTLQKYKELQDIIAI 385

Query: 393 GG 394
            G
Sbjct: 386 LG 387


>gi|28625015|emb|CAD56146.1| F1F0-ATPase subunit beta [Pediococcus parvulus]
          Length = 470

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 163/295 (55%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  +  G  ++    + + PP  +      +  +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGETIDNGEKFGP-EVKRNPIHRDPPKYDDLNPSMEILETGIKVIDLLAPYIR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+K
Sbjct: 146 GGKVGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLEK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             L RSL ++G YP VDPLAS S   D +   +E  K+ + + H++ R+ E +DI
Sbjct: 324 TNLERSLTQQGIYPAVDPLASTSSALDPSVVGEEHYKVATDVQHVLQRYRELQDI 378


>gi|261838460|gb|ACX98226.1| ATP synthase F1 beta chain [Helicobacter pylori 51]
          Length = 469

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +  S    ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMISEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|157164647|ref|YP_001466345.1| F0F1 ATP synthase subunit beta [Campylobacter concisus 13826]
 gi|190358267|sp|A7ZC37|ATPB_CAMC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|112800107|gb|EAT97451.1| ATP synthase F1, beta subunit [Campylobacter concisus 13826]
          Length = 465

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID  + +   D    I    PP   +    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVVGDLIDEGEGI-NFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD   
Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNRS+AE+G YP VDPL S SR+ D +   AD  K+   +  ++ ++++ +DI  I G
Sbjct: 324 VLNRSIAEKGIYPAVDPLDSTSRMLDPQILGADHYKVARGVQAVLQKYKDLQDIIAILG 382


>gi|226315033|ref|YP_002774929.1| ATP synthase beta chain [Brevibacillus brevis NBRC 100599]
 gi|254808134|sp|C0Z776|ATPB_BREBN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226097983|dbj|BAH46425.1| ATP synthase beta chain [Brevibacillus brevis NBRC 100599]
          Length = 469

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 177/331 (53%), Gaps = 16/331 (4%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV N LG+PID  + LG+ D    I  K P  +++    +  +TGI+VID+  P 
Sbjct: 89  AITLGRVFNVLGEPIDLQE-LGQVDRRDPIHRKAPEFVDQATTVEILETGIKVIDLLAPY 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+  +     +   +   IS+   VGER RE  +   +      L
Sbjct: 148 IKGGKIGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDAGVL 207

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 208 PKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEEGRDVLLFVDNIFRFTQAGSEVSALL 267

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD
Sbjct: 268 GRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLD 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L RS+AE G +P VDPLAS SR LA      +   +  S+  ++ R++E +DI  I
Sbjct: 326 ATTNLERSIAELGIFPAVDPLASTSRALAPDIVGQEHYDVARSVQKILQRYKELQDIIAI 385

Query: 393 GGYRPGVDLILD---KAVHQVPIIYDFLKQS 420
                G+D + D   + V +   I  FL QS
Sbjct: 386 ----LGMDELSDDDKQVVGRARRIQRFLSQS 412


>gi|224543580|ref|ZP_03684119.1| hypothetical protein CATMIT_02789 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523507|gb|EEF92612.1| hypothetical protein CATMIT_02789 [Catenibacterium mitsuokai DSM
           15897]
          Length = 466

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  IDG D L + +  M I    P   +++   +  +TGI+V+D+  P   G 
Sbjct: 89  GRMFNVLGHSIDGKDELTE-EKHMPIHRSAPTFADQRTETEILETGIKVVDLICPFIKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  F  +   +   +S+   VGER RE  + + E      L K+ 
Sbjct: 148 KIGLFGGAGVGKTVLIQEFINNIATEHNGLSVFAGVGERSREGNDLYYEMKESGVLDKTT 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 208 LVFGQMNEPPGSRLRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRVP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +E+ +L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 268 SQAGYQPTLATEMGQLQERI--TSTKQGSITSVQAVYVPADDMTDPAPATTFTHLDARVV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+A  G YP VDPL S SR  D      E  ++   +T ++ +++E +DI  I G
Sbjct: 326 LDRSIAALGIYPAVDPLNSSSRGLDPNVVGKEHYEVAHGVTQMLQKYQELQDIIAILG 383


>gi|104773795|ref|YP_618775.1| F0F1 ATP synthase subunit beta [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|118573689|sp|Q1GAW5|ATPB_LACDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|103422876|emb|CAI97538.1| H+ transporting ATPase / ATP synthase, beta subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 479

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PIDG            I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E   V++ + H++ R+ E ++I
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQNI 378


>gi|302871779|ref|YP_003840415.1| ATP synthase F1, beta subunit [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574638|gb|ADL42429.1| ATP synthase F1, beta subunit [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 467

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+PID    +   D    I    P    +    + F+TGI+
Sbjct: 76  GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206
           VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + ++
Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E      ++K+V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|295425476|ref|ZP_06818169.1| ATP synthase F1 sector beta subunit [Lactobacillus amylolyticus DSM
           11664]
 gi|295064815|gb|EFG55730.1| ATP synthase F1 sector beta subunit [Lactobacillus amylolyticus DSM
           11664]
          Length = 484

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PID      K      I  + P         +  +TGI+VID+  P   G
Sbjct: 92  LGRVFNVLGQPIDNGPEFPKDHPREGIHKEAPKYDELTTSREILETGIKVIDLLEPYVRG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 152 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 212 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 272 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +D+
Sbjct: 330 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDV 383


>gi|1361451|pir||B64244 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           Mycoplasma genitalium
          Length = 382

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 167/298 (56%), Gaps = 13/298 (4%)

Query: 105 VINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PIDG + L K   LS+    + PPA + Q      F+TGI+VID+ TP   G 
Sbjct: 1   MFNVLGEPIDGKEPLPKKPKLSIH---RNPPAFDEQPNTVDIFETGIKVIDLLTPYVRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E   G  + K+V
Sbjct: 58  KIGLFGGAGVGKTVLVQELIHNIAKEHSGLSVFAGVGERTREGNDLYYEMIQGGVIDKTV 117

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  +  E++   G +P
Sbjct: 118 LVFGQMNEPPGARMRVALTALTMAEYFRDHDNQNVLLFIDNIFRFTQAGSEVSALLGRMP 177

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   V
Sbjct: 178 SAVGYQPTLAIEMGKLQERIAST--KTGSITSVQAIYVPADDLTDPAPATTFTHLDAKTV 235

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G +P ++PL S SRL D +    +  K+   + +++ RF E +DI  I G
Sbjct: 236 LDRNIAALGIFPAINPLESTSRLLDPSVVGINHYKVALGVQNILQRFAELQDIIAILG 293


>gi|312622353|ref|YP_004023966.1| ATP synthase F1 subunit beta [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202820|gb|ADQ46147.1| ATP synthase F1, beta subunit [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 467

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+PID    +   D    I    P    +    + F+TGI+
Sbjct: 76  GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206
           VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + ++
Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E      ++K+V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|312127526|ref|YP_003992400.1| ATP synthase F1 subunit beta [Caldicellulosiruptor hydrothermalis
           108]
 gi|312135222|ref|YP_004002560.1| ATP synthase F1 subunit beta [Caldicellulosiruptor owensensis OL]
 gi|311775273|gb|ADQ04760.1| ATP synthase F1, beta subunit [Caldicellulosiruptor owensensis OL]
 gi|311777545|gb|ADQ07031.1| ATP synthase F1, beta subunit [Caldicellulosiruptor hydrothermalis
           108]
          Length = 467

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+PID    +   D    I    P    +    + F+TGI+
Sbjct: 76  GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206
           VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + ++
Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E      ++K+V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|225569926|ref|ZP_03778951.1| hypothetical protein CLOHYLEM_06021 [Clostridium hylemonae DSM
           15053]
 gi|225161396|gb|EEG74015.1| hypothetical protein CLOHYLEM_06021 [Clostridium hylemonae DSM
           15053]
          Length = 474

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ IDG +++  G    EI  K P    +    +  +TGI+VID+ TP   G
Sbjct: 96  LGRLFNVLGETIDGKEAIDSGSRRWEIHRKAPGFEEQSPAVEVLETGIKVIDLLTPYAKG 155

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   + +G++  L K
Sbjct: 156 GKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVLDK 214

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G 
Sbjct: 215 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFVQAGSEVSALLGR 274

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G++T+V +V V  D+  DP   +  S LD  
Sbjct: 275 MPSAVGYQPTLAQEMGALQERIAST--KNGSVTSVQAVYVPADDLTDPAPATTFSHLDAT 332

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I G
Sbjct: 333 TVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYRVARKVQEILQKYKELQDIIAILG 392


>gi|146296975|ref|YP_001180746.1| F0F1 ATP synthase subunit beta [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|189081328|sp|A4XKX0|ATPB_CALS8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145410551|gb|ABP67555.1| ATP synthase F1 subcomplex beta subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 467

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+PID    +   D    I    P    +    + F+TGI+
Sbjct: 76  GPIKVPVGRGTLGRIFNVLGQPIDNKGEVQATDY-WPIHRSAPSFEEQVPAVEIFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206
           VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + ++
Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E      ++K+V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V ++ V  D+  DP  
Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKRGSITSVQAIYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|312793601|ref|YP_004026524.1| ATP synthase F1 subunit beta [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180741|gb|ADQ40911.1| ATP synthase F1, beta subunit [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 467

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+PID    +   D    I    P    +    + F+TGI+
Sbjct: 76  GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206
           VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + ++
Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E      ++K+V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|227529637|ref|ZP_03959686.1| H(+)-transporting two-sector ATPase [Lactobacillus vaginalis ATCC
           49540]
 gi|227350427|gb|EEJ40718.1| H(+)-transporting two-sector ATPase [Lactobacillus vaginalis ATCC
           49540]
          Length = 474

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+P+D     G     M I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDELNNNTEILETGIKVIDLLAPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      L+K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPLAS S  L  +    +  ++ + + H++ R+ E +DI  I   
Sbjct: 325 NLERRLTQIGIYPAVDPLASTSTALTPEIVGKEHYEVATEVQHVLQRYHELQDIISI--- 381

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D     V +   I +FL QS
Sbjct: 382 -LGMDELSDDEKVIVARARRIQNFLSQS 408


>gi|326391019|ref|ZP_08212568.1| ATP synthase F1, beta subunit [Thermoanaerobacter ethanolicus JW
           200]
 gi|325992964|gb|EGD51407.1| ATP synthase F1, beta subunit [Thermoanaerobacter ethanolicus JW
           200]
          Length = 461

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID    LG  K    M I  K PP   +    +  +TGI+VID+ TP  
Sbjct: 84  LGRMFNVLGQPID---ELGEVKDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  E + E +    + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMHESGVID 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+  V    +E P  R    L  +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ ++L  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 261 RMPSAVGYQPTLATDLGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ +     +E   V+  +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|169832274|ref|YP_001718256.1| F0F1 ATP synthase subunit beta [Candidatus Desulforudis audaxviator
           MP104C]
 gi|226740188|sp|B1I6J7|ATPB_DESAP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169639118|gb|ACA60624.1| ATP synthase F1, beta subunit [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 472

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/304 (36%), Positives = 170/304 (55%), Gaps = 19/304 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQ--RVEKGFKTGIRVIDIFT 156
            GR+I+ LG PIDG      GD+  E    + +  PA+  Q  +VE+  +TG++VID+  
Sbjct: 92  LGRLIDVLGMPIDG-----LGDIKAETYYPIHRPAPALVDQSTKVEQ-LETGLKVIDLLV 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ ++     +       IS+   VGER RE  E + E     
Sbjct: 146 PFMKGGKIGMFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNELLLEMTEAG 205

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            L K+++V    +E P  R    LT + +AEYF   +G +VL+ +D+I RFA +  E++ 
Sbjct: 206 VLDKTMMVFGQMNEPPGCRLRVGLTGLCLAEYFRDEEGADVLIFIDNIFRFAQAGTEVSA 265

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT+V +V V  D+  DP   +  + 
Sbjct: 266 LLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSITSVQAVYVPADDLTDPAPANTFAH 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LDG +VL+R +AE G YP VDPL SVSR+ D      E   V+  +  ++ R++E +DI 
Sbjct: 324 LDGTVVLSRQIAELGIYPAVDPLDSVSRILDPNVVGQEHYQVARGVQKVLQRYKELQDII 383

Query: 391 LIGG 394
            I G
Sbjct: 384 AILG 387


>gi|296134373|ref|YP_003641620.1| ATP synthase F1, beta subunit [Thermincola sp. JR]
 gi|296032951|gb|ADG83719.1| ATP synthase F1, beta subunit [Thermincola potens JR]
          Length = 474

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 166/299 (55%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG  ID    + + D+   I    P   +++   +  +TGI+V+D+  P   G
Sbjct: 94  LGRLMNVLGDSIDHKGPI-ESDVRYPIHRPAPAFEDQETATEILETGIKVVDLLAPYAKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-GDNLKKS 217
            +IG+F G+G+GK+ L+    R+  ++     + + VGER RE  +   + + G  + K+
Sbjct: 153 GKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFAGVGERTREGNDLYHEMIAGGVIDKT 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE+F   +G +VLL +D+I RF  +  E++   G +
Sbjct: 213 AMVFGQMNEPPGARLRVALTGLTVAEFFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     +E  ++   + +++ R++E +DI  I G
Sbjct: 331 VLSRQIAELGIYPAVDPLDSTSRVLDPRIVGEEHYRVARDVQNILQRYKELQDIIAILG 389


>gi|108759590|ref|YP_635037.1| F0F1 ATP synthase subunit beta [Myxococcus xanthus DK 1622]
 gi|118573702|sp|Q1CX36|ATPB_MYXXD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|108463470|gb|ABF88655.1| ATP synthase F1, beta subunit [Myxococcus xanthus DK 1622]
          Length = 481

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 166/309 (53%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N  G+P+D    +   +     + + PP    Q V  + F+TGI+VID+  P 
Sbjct: 93  ATLGRILNVTGEPVDEMGPVKAQEYWS--IHRAPPPFTEQDVRVQMFETGIKVIDLLAPY 150

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ LL    R+   ++    + + VGER RE  +   +       
Sbjct: 151 TRGGKIGLFGGAGVGKTVLLQELIRNVAVERGGFSVFAGVGERTREGNDLYHEMQDTKVI 210

Query: 211 -GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             DNL+ S  V+V    +E P  R    L+A+T+AEYF   +G +VLL +D+I RF  + 
Sbjct: 211 QTDNLEASQAVLVYGQMNEPPGARARVALSALTMAEYFRDVEGRDVLLFVDNIFRFTQAG 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  DP   
Sbjct: 271 SEVSALLGRIPSAVGYQPTLATEMGGLQERI--TSTTKGSITSVQAIYVPADDLTDPAPA 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VLNRS+AE   +P VDPL S SR+ D A   A+   +   +  ++ R++E
Sbjct: 329 TAFAHLDATTVLNRSIAELAIFPAVDPLDSTSRILDPAVIGAEHYGVARKVQGILQRYKE 388

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 389 LQDIIAILG 397


>gi|303245589|ref|ZP_07331872.1| ATP synthase F1, beta subunit [Desulfovibrio fructosovorans JJ]
 gi|302492852|gb|EFL52717.1| ATP synthase F1, beta subunit [Desulfovibrio fructosovorans JJ]
          Length = 470

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 165/298 (55%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    + +   S+ I    PP +++    +  +TGI+V+D+  P   G 
Sbjct: 95  GRILNVVGRPVDEMGPI-EATASLPIHRPAPPFVDQSTSIELLETGIKVVDLLIPFPKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKSV 218
           ++G+F G+G+GK+ +L     +       +S+   VGER RE  +   ++   D L K+ 
Sbjct: 154 KMGLFGGAGVGKTVILMELINNIAKHHGGLSVFAGVGERTREGNDLYNEFKEADILGKAC 213

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T AEYF   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 214 LVYGQMNEPPGARSRVALTGLTCAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMP 273

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ ++L  L ERI  +  +KG+IT+V +V V  D+  DP   +  S LDG +V
Sbjct: 274 SAVGYQPTLGTDLGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDGTLV 331

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR+ D +   AD       +  ++ ++++ +DI  I G
Sbjct: 332 LSRQIAELGIYPAVDPLDSTSRILDPQVLGADHYGTAREVQQILQKYKDLQDIIAILG 389


>gi|315453870|ref|YP_004074140.1| ATP synthase F1 sector subunit beta [Helicobacter felis ATCC 49179]
 gi|315132922|emb|CBY83550.1| ATP synthase F1 sector beta subunit [Helicobacter felis ATCC 49179]
          Length = 474

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K   +  I    P    +    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVVGEVIDNQEPL-KAPTTWPIHRAAPSFEQQSTKTEMFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG ++L+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDILMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  + G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D     DE  ++ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVIGDEHYRVATGIQQILQKYKDLQDIIAILG 382


>gi|312875902|ref|ZP_07735892.1| ATP synthase F1, beta subunit [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311797383|gb|EFR13722.1| ATP synthase F1, beta subunit [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 467

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 166/310 (53%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+PID    +   D    I    P    +    + F+TGI+
Sbjct: 76  GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206
           VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + ++
Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E      ++K+V+V    +E P  R    LT +T+AEYF   +G  VLL +D+I RF  +
Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQEVLLFIDNIFRFIQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|1168575|sp|P43451|ATPB_ENTHR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|153573|gb|AAA26859.1| H+ ATPase [Enterococcus faecalis]
          Length = 468

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 160/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID   S  +     EI  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLGSSFPEDAERSEIHKKAPSFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +    +  K+ + + H++ R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYKVATEVQHVLQRYRELQDIIAILG 385


>gi|315923929|ref|ZP_07920157.1| ATP synthase F1 sector beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622769|gb|EFV02722.1| ATP synthase F1 sector beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 469

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G P+DG D L +     EI  + P   ++    +  +TGI+VID+  P   G
Sbjct: 85  LGRLFNVTGGPLDGGDPLTEAP-RWEIHREPPKFEDQSPAVEMLETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + + E      L+K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLYTEMRESGVLEKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R + P T +T+AEYF   K  NVLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGSRMLVPETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +    G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLANEMGQLQERI--TSTRNGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ +     +E  +    +  ++ +++E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYQTARRVQAILQKYQELQDIIAILG 380


>gi|222529413|ref|YP_002573295.1| F0F1 ATP synthase subunit beta [Caldicellulosiruptor bescii DSM
           6725]
 gi|254808126|sp|B9MS68|ATPB_ANATD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222456260|gb|ACM60522.1| ATP synthase F1, beta subunit [Caldicellulosiruptor bescii DSM
           6725]
          Length = 467

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+PID    +   D    I    P    +    + F+TGI+
Sbjct: 76  GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207
           VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   
Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           D      ++K+V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 195 DMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|282934187|ref|ZP_06339465.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
 gi|281301801|gb|EFA94067.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
          Length = 480

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID             I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D     +E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378


>gi|269468571|gb|EEZ80220.1| F0F1-type ATP synthase, beta subunit [uncultured SUP05 cluster
           bacterium]
          Length = 459

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 160/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +   +   EI    PP        +  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGEPIDNAGDIDP-EAEWEIHRSAPPYDELAPAAELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ SE+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D     +E   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGVQGVLQRYKELKDIIAILG 377


>gi|38906115|gb|AAR27810.1| ATP synthase beta chain [Lactobacillus amylolyticus DSM 11664]
          Length = 371

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+PID      K D   E + K  P  +     +   +TGI+VID+  P   
Sbjct: 28  LGRVFNVLGQPIDNGPEFPK-DHPREGIHKEAPKYDELTTSREILETGIKVIDLLEPYVR 86

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+T++     +   +   IS+    GER RE  + + E      L K
Sbjct: 87  GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGAGERTREGNDLYFEMKASGVLSK 146

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 147 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 206

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  
Sbjct: 207 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 264

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             L RSL E+G YP VDPL S S   D      E  ++ + + H++ R+ E +D+
Sbjct: 265 TNLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDV 319


>gi|253702620|ref|YP_003023809.1| F0F1 ATP synthase subunit beta [Geobacter sp. M21]
 gi|259585445|sp|C6E9F1|ATPB_GEOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|251777470|gb|ACT20051.1| ATP synthase F1, beta subunit [Geobacter sp. M21]
          Length = 470

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +G  +    I  + P  +N+    + F TGI+V+D+  P   G
Sbjct: 92  LGRILNVIGEPVDEMGPIGN-EKEYGIHREAPAFVNQSTKVEAFTTGIKVVDLLAPYARG 150

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  + ++E      L 
Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGVLD 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+A++IAEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 209 KAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 269 RIPSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHLDA 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D     DE   ++  + +++ ++++ +DI  I 
Sbjct: 327 TTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGDEHYAIARQVQYVLQKYKDLQDIIAIL 386

Query: 394 G 394
           G
Sbjct: 387 G 387


>gi|304316372|ref|YP_003851517.1| ATP synthase F1 subunit beta [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777874|gb|ADL68433.1| ATP synthase F1, beta subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 461

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 173/327 (52%), Gaps = 16/327 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LGKP+DG   + K D  + I    P    +  V +  +TGI+VID+ TP   G
Sbjct: 84  LGRMFNVLGKPVDGLGEV-KADKYVSIHRNAPSFEEQSPVTEVLETGIKVIDLLTPYAKG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      + K+
Sbjct: 143 GKIGLFGGAGVGKTVLIEELIRNIATEHGGYSIFTGVGERTREGNDLWHEMKESGVIDKT 202

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 203 AFVFGQMNEPPGARMRVGLTGLTMAEYFRDEKHQDVLLFIDNIFRFIQAGSEVSALLGRM 262

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +EL  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 263 PSAVGYQPTLATELGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFTHLDATT 320

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGY 395
           VL+RS+ E G YP VDPL S SR+ + +   +E   V+  +  ++ +++E +DI  I   
Sbjct: 321 VLSRSIVEMGIYPAVDPLDSTSRILEPSIVGEEHYNVARRVQEILQKYKELQDIIAI--- 377

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQ 419
             G+D + D+    V++   I  FL Q
Sbjct: 378 -LGMDELSDEDKLTVYRARKIQRFLSQ 403


>gi|238855947|ref|ZP_04646233.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 269-3]
 gi|260664664|ref|ZP_05865516.1| ATP synthase F1, beta subunit [Lactobacillus jensenii SJ-7A-US]
 gi|282934354|ref|ZP_06339621.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
 gi|313471885|ref|ZP_07812377.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 1153]
 gi|238831420|gb|EEQ23771.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 269-3]
 gi|239529199|gb|EEQ68200.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 1153]
 gi|260561729|gb|EEX27701.1| ATP synthase F1, beta subunit [Lactobacillus jensenii SJ-7A-US]
 gi|281301564|gb|EFA93841.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
          Length = 480

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID             I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D     +E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378


>gi|256850901|ref|ZP_05556290.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260661115|ref|ZP_05862029.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 115-3-CHN]
 gi|256615963|gb|EEU21151.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260548052|gb|EEX24028.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 115-3-CHN]
          Length = 480

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID             I  + P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+T++     +   +   IS+   VGER RE  + + E      L K+
Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPL S S   D     +E  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378


>gi|28378938|ref|NP_785830.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum WCFS1]
 gi|254557143|ref|YP_003063560.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum JDM1]
 gi|300769661|ref|ZP_07079544.1| ATP synthase F1 sector beta subunit [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181146|ref|YP_003925274.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|81840957|sp|Q88UU3|ATPB_LACPL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28271775|emb|CAD64681.1| H(+)-transporting two-sector ATPase, beta subunit [Lactobacillus
           plantarum WCFS1]
 gi|254046070|gb|ACT62863.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum JDM1]
 gi|300492704|gb|EFK27889.1| ATP synthase F1 sector beta subunit [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046637|gb|ADN99180.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 467

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ IDG    G       I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGETIDGGPEFGPDAERNPIHRDAPKYDELTTSTEVLETGIKVIDLLAPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      LK +
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLKNT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L RSL E+G YP VDPLAS S   D +   +E  ++ + +  ++ R+ E +DI
Sbjct: 325 NLERSLTEQGIYPAVDPLASSSIALDPSIVGEEHYQVATEVQRVLQRYRELQDI 378


>gi|319956203|ref|YP_004167466.1| ATP synthase f1 subcomplex beta subunit [Nitratifractor salsuginis
           DSM 16511]
 gi|319418607|gb|ADV45717.1| ATP synthase F1 subcomplex beta subunit [Nitratifractor salsuginis
           DSM 16511]
          Length = 468

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 164/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ + +G  ID G+    K   S+    + PPA + Q  +   F+TGI+V+D+  P  
Sbjct: 87  LGRIFDVVGNVIDDGEPVEAKTKWSIH---RTPPAFDVQSTKAEIFETGIKVVDLLAPYA 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ ++     +         + + VGER RE  +   +    N L 
Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELINNVAMKHSGYSVFAGVGERTREGNDLYNEMKESNVLD 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K  +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RFA S  E++   G
Sbjct: 204 KVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFAQSGAEMSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ SE+ +L ERI  +   KG+IT+V +V V  D+  DP   SV + LD 
Sbjct: 264 RIPSAVGYQPTLASEMGKLQERI--TSTTKGSITSVQAVYVPADDLTDPAPASVFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VLNRS+AE+G YP VDPL S SR+ D     DE   V+  +  ++ ++++ +DI  I 
Sbjct: 322 TTVLNRSIAEKGIYPAVDPLDSTSRMLDPVIIGDEHYQVARGVQAILQKYKDLQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|188527915|ref|YP_001910602.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Shi470]
 gi|188144155|gb|ACD48572.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Shi470]
 gi|308063917|gb|ADO05804.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Sat464]
          Length = 469

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGSEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|218781464|ref|YP_002432782.1| F0F1 ATP synthase subunit beta [Desulfatibacillum alkenivorans
           AK-01]
 gi|254808144|sp|B8FGT4|ATPB_DESAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218762848|gb|ACL05314.1| ATP synthase F1, beta subunit [Desulfatibacillum alkenivorans
           AK-01]
          Length = 472

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 164/305 (53%), Gaps = 17/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAMNRQRVE-KGFKTGIRVIDIF 155
              GRV+N +G+P+DG      G +S E M    ++ P    Q    +  +TG++VID+ 
Sbjct: 90  AVLGRVLNVVGRPVDG-----LGPVSQEKMLPIHRLAPKFTEQDTTVRVLETGVKVIDLL 144

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-G 211
            P   G ++G+F G+G+GK+ ++     +       IS+   VGER RE  +   +   G
Sbjct: 145 VPFPRGGKMGMFGGAGVGKTVIMMEMVHNIAMQHGGISVFAGVGERTREGNDLYHEMKEG 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             L K+ +V     E P  R    L+A+T AEYF   +G +VL+ +D+I RF  +  E++
Sbjct: 205 GVLPKASLVYGQMTEPPGARARVALSALTSAEYFRDQEGQDVLIFIDNIFRFTQAGSEVS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  +L  L ERI  +  +KG+ITAV  V V  D+  DP   +  +
Sbjct: 265 ALLGRMPSAVGYQPTLAVDLGELQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFA 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LDG +VL+R + E G YP VDPL S SR+ D  +  DE   V+ ++  ++ +++E +DI
Sbjct: 323 HLDGTVVLSRQIVELGIYPAVDPLDSSSRILDPGYLGDEHYGVARTVQQMLQKYKELQDI 382

Query: 390 RLIGG 394
             I G
Sbjct: 383 IAILG 387


>gi|319936635|ref|ZP_08011048.1| ATP synthase subunit beta [Coprobacillus sp. 29_1]
 gi|319808192|gb|EFW04757.1| ATP synthase subunit beta [Coprobacillus sp. 29_1]
          Length = 468

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG PIDG + L    ++M I    P    ++   +  +TGI+VID+  P   G 
Sbjct: 87  GRMFNVLGNPIDGKEPLDSSVMAMPIHRSAPTYAQQRTETEILETGIKVIDLICPYIKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+ 
Sbjct: 147 KIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGERSREGNDLYYEMKESGVLNKTT 206

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +P
Sbjct: 207 LVFGQMNEPPGSRLRVALTGLTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRVP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 267 SQAGYQPTLATEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDAKVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+A  G YP VDPL S SR  D         ++   +  ++ +F+E +DI  I G
Sbjct: 325 LDRSIAALGIYPAVDPLNSSSRALDPLVVGQVHYEVAHGVQQILQKFQELQDIIAILG 382


>gi|317014518|gb|ADU81954.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Gambia94/24]
          Length = 469

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHGKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|217034727|ref|ZP_03440128.1| hypothetical protein HP9810_3g12 [Helicobacter pylori 98-10]
 gi|216942810|gb|EEC22309.1| hypothetical protein HP9810_3g12 [Helicobacter pylori 98-10]
          Length = 466

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382


>gi|119368476|sp|Q1CSD5|ATPB_HELPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 466

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382


>gi|317178566|dbj|BAJ56354.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F30]
          Length = 469

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|261839863|gb|ACX99628.1| F0F1 ATP synthase subunit beta [Helicobacter pylori 52]
 gi|315587020|gb|ADU41401.1| ATP synthase F1 sector beta subunit [Helicobacter pylori 35A]
 gi|317012909|gb|ADU83517.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Lithuania75]
 gi|317180864|dbj|BAJ58650.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F32]
 gi|317182385|dbj|BAJ60169.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F57]
 gi|332673930|gb|AEE70747.1| ATP synthase F1 sector beta subunit [Helicobacter pylori 83]
          Length = 469

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|254779683|ref|YP_003057789.1| F0F1 ATP synthase subunit beta [Helicobacter pylori B38]
 gi|254001595|emb|CAX29662.1| ATP synthase F1, subunit beta (ATPase subunit beta) (ATP synthase
           F1 sector subunit beta) [Helicobacter pylori B38]
          Length = 469

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|208435029|ref|YP_002266695.1| ATP synthase F1, subunit beta [Helicobacter pylori G27]
 gi|226740208|sp|B5Z8D0|ATPB_HELPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2197129|gb|AAB61298.1| F1F0-ATPase beta subunit [Helicobacter pylori]
 gi|208432958|gb|ACI27829.1| ATP synthase F1, subunit beta [Helicobacter pylori G27]
          Length = 469

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|92115399|ref|YP_575327.1| F0F1 ATP synthase subunit beta [Chromohalobacter salexigens DSM
           3043]
 gi|118573521|sp|Q1QSD0|ATPB_CHRSD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91798489|gb|ABE60628.1| ATP synthase F1 subcomplex beta subunit [Chromohalobacter
           salexigens DSM 3043]
          Length = 458

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 168/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G D+V       +       GR++N LG+PID    +G+ D  M 
Sbjct: 48  VVRAIAMGTTEGLKRGLDVVNSGSAISVPVGKATLGRIMNVLGEPIDEAGEIGE-DERMP 106

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 107 IHRKAPSYAEQAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAT 166

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +TIAE
Sbjct: 167 EHSGYSVFAGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAE 226

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F   G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 227 KFRDDGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 284

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  S LD  +VL RS+AE G YP +DPL S SR  D 
Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               +E       +  ++ R++E +DI  I G
Sbjct: 345 LTVGEEHYNTARGVQGVLQRYKELKDIIAILG 376


>gi|15612125|ref|NP_223777.1| F0F1 ATP synthase subunit beta [Helicobacter pylori J99]
 gi|9910638|sp|Q9ZK81|ATPB_HELPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|4155651|gb|AAD06639.1| ATP synthase F1, subunit beta [Helicobacter pylori J99]
          Length = 469

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|217032681|ref|ZP_03438167.1| hypothetical protein HPB128_202g15 [Helicobacter pylori B128]
 gi|298735865|ref|YP_003728390.1| F-type H+-transporting ATPase beta chain [Helicobacter pylori B8]
 gi|216945611|gb|EEC24262.1| hypothetical protein HPB128_202g15 [Helicobacter pylori B128]
 gi|298355054|emb|CBI65926.1| F-type H+-transporting ATPase beta chain [Helicobacter pylori B8]
          Length = 466

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382


>gi|69247775|ref|ZP_00604480.1| ATP synthase F1, beta subunit [Enterococcus faecium DO]
 gi|227552045|ref|ZP_03982094.1| ATP synthase subunit beta [Enterococcus faecium TX1330]
 gi|257879714|ref|ZP_05659367.1| ATP synthase F1 [Enterococcus faecium 1,230,933]
 gi|257882707|ref|ZP_05662360.1| ATP synthase F1 [Enterococcus faecium 1,231,502]
 gi|257884021|ref|ZP_05663674.1| ATP synthase F1 [Enterococcus faecium 1,231,501]
 gi|257886793|ref|ZP_05666446.1| ATP synthase F1 [Enterococcus faecium 1,141,733]
 gi|257890378|ref|ZP_05670031.1| ATP synthase F1 [Enterococcus faecium 1,231,410]
 gi|257892986|ref|ZP_05672639.1| ATP synthase F1 [Enterococcus faecium 1,231,408]
 gi|257895361|ref|ZP_05675014.1| ATP synthase F1 [Enterococcus faecium Com12]
 gi|257897973|ref|ZP_05677626.1| ATP synthase F1 [Enterococcus faecium Com15]
 gi|258616675|ref|ZP_05714445.1| F0F1 ATP synthase subunit beta [Enterococcus faecium DO]
 gi|260559627|ref|ZP_05831807.1| ATP synthase F1 [Enterococcus faecium C68]
 gi|261208692|ref|ZP_05923129.1| ATP synthase F1 [Enterococcus faecium TC 6]
 gi|289566051|ref|ZP_06446488.1| ATP synthase F1, beta subunit [Enterococcus faecium D344SRF]
 gi|293378232|ref|ZP_06624401.1| ATP synthase F1, beta subunit [Enterococcus faecium PC4.1]
 gi|293556416|ref|ZP_06674997.1| ATP synthase F1, beta subunit [Enterococcus faecium E1039]
 gi|293560028|ref|ZP_06676532.1| ATP synthase F1, beta subunit [Enterococcus faecium E1162]
 gi|293568724|ref|ZP_06680039.1| ATP synthase F1, beta subunit [Enterococcus faecium E1071]
 gi|293572425|ref|ZP_06683405.1| ATP synthase F1, beta subunit [Enterococcus faecium E980]
 gi|294616249|ref|ZP_06696042.1| ATP synthase F1, beta subunit [Enterococcus faecium E1636]
 gi|294617581|ref|ZP_06697211.1| ATP synthase F1, beta subunit [Enterococcus faecium E1679]
 gi|294623204|ref|ZP_06702082.1| ATP synthase F1, beta subunit [Enterococcus faecium U0317]
 gi|314939612|ref|ZP_07846839.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a04]
 gi|314941238|ref|ZP_07848134.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133C]
 gi|314949829|ref|ZP_07853139.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0082]
 gi|314953379|ref|ZP_07856304.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133A]
 gi|314993456|ref|ZP_07858821.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133B]
 gi|314997321|ref|ZP_07862286.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a01]
 gi|68194704|gb|EAN09186.1| ATP synthase F1, beta subunit [Enterococcus faecium DO]
 gi|227178798|gb|EEI59770.1| ATP synthase subunit beta [Enterococcus faecium TX1330]
 gi|257813942|gb|EEV42700.1| ATP synthase F1 [Enterococcus faecium 1,230,933]
 gi|257818365|gb|EEV45693.1| ATP synthase F1 [Enterococcus faecium 1,231,502]
 gi|257819859|gb|EEV47007.1| ATP synthase F1 [Enterococcus faecium 1,231,501]
 gi|257822847|gb|EEV49779.1| ATP synthase F1 [Enterococcus faecium 1,141,733]
 gi|257826738|gb|EEV53364.1| ATP synthase F1 [Enterococcus faecium 1,231,410]
 gi|257829365|gb|EEV55972.1| ATP synthase F1 [Enterococcus faecium 1,231,408]
 gi|257831926|gb|EEV58347.1| ATP synthase F1 [Enterococcus faecium Com12]
 gi|257835885|gb|EEV60959.1| ATP synthase F1 [Enterococcus faecium Com15]
 gi|260074295|gb|EEW62617.1| ATP synthase F1 [Enterococcus faecium C68]
 gi|260077194|gb|EEW64914.1| ATP synthase F1 [Enterococcus faecium TC 6]
 gi|289162158|gb|EFD10021.1| ATP synthase F1, beta subunit [Enterococcus faecium D344SRF]
 gi|291588684|gb|EFF20517.1| ATP synthase F1, beta subunit [Enterococcus faecium E1071]
 gi|291590763|gb|EFF22479.1| ATP synthase F1, beta subunit [Enterococcus faecium E1636]
 gi|291596187|gb|EFF27450.1| ATP synthase F1, beta subunit [Enterococcus faecium E1679]
 gi|291597399|gb|EFF28572.1| ATP synthase F1, beta subunit [Enterococcus faecium U0317]
 gi|291601483|gb|EFF31754.1| ATP synthase F1, beta subunit [Enterococcus faecium E1039]
 gi|291605895|gb|EFF35325.1| ATP synthase F1, beta subunit [Enterococcus faecium E1162]
 gi|291607487|gb|EFF36829.1| ATP synthase F1, beta subunit [Enterococcus faecium E980]
 gi|292643096|gb|EFF61237.1| ATP synthase F1, beta subunit [Enterococcus faecium PC4.1]
 gi|313588612|gb|EFR67457.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a01]
 gi|313592121|gb|EFR70966.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133B]
 gi|313594572|gb|EFR73417.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133A]
 gi|313599962|gb|EFR78805.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133C]
 gi|313641152|gb|EFS05732.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a04]
 gi|313643902|gb|EFS08482.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0082]
          Length = 468

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 160/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +     EI  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLETPFPEDAERSEIHKKAPAFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +    +  K+ + + H++ R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYKVATEVQHVLQRYRELQDIIAILG 385


>gi|317177882|dbj|BAJ55671.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F16]
          Length = 469

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|308062408|gb|ADO04296.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Cuz20]
          Length = 469

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|261883793|ref|ZP_06007832.1| flagellum-specific ATP synthase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 201

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 121/195 (62%), Gaps = 4/195 (2%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G PID    L KG + +      P  + R  + +  + G++ ID    +  GQR+G+FA
Sbjct: 1   MGMPID-LSPLPKGLVPVRTEQDPPNPLTRPTIRERIEVGVKAIDGMLTVGKGQRVGIFA 59

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           GSG+GKSTLL M AR+   D  +I+L+GERGREVREFIE+ LG+   K++++V ATSD+ 
Sbjct: 60  GSGVGKSTLLGMIARNTTADLNVIALIGERGREVREFIENDLGEEGQKRTIIVAATSDQP 119

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            ++R     TA  IAEYF  +G NV+L++DS+TR A + RE+     E P  RGY  SVF
Sbjct: 120 ALMRIKGAFTATAIAEYFRDRGLNVMLMMDSVTRVAMAQREVWLAVWEPPATRGYTPSVF 179

Query: 288 SELPRLLERIGPSEK 302
           S LP  L    P+E+
Sbjct: 180 SILPNCLR--DPNER 192


>gi|317009744|gb|ADU80324.1| F0F1 ATP synthase subunit beta [Helicobacter pylori India7]
          Length = 469

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|166033116|ref|ZP_02235945.1| hypothetical protein DORFOR_02838 [Dorea formicigenerans ATCC
           27755]
 gi|166027473|gb|EDR46230.1| hypothetical protein DORFOR_02838 [Dorea formicigenerans ATCC
           27755]
          Length = 470

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 169/325 (52%), Gaps = 11/325 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID    + K     EI  + P    +    +  +TGI+VID+  P   G
Sbjct: 89  LGRLFNVLGQTIDDGKEIEKDAERWEIHRQAPTFEEQSPAVEILETGIKVIDLLAPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      L+K+
Sbjct: 149 GKIGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLWTEMKASGVLEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF  K   NVLL +D+I RF  +  E++   G +
Sbjct: 209 ALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G++T+V +V V  D+  DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGELQERIAST--KNGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R + E+G YP VDPL S SR+ +     +E  K+ + +T ++ +++E +DI  I G 
Sbjct: 327 VLSRKVVEQGIYPAVDPLESNSRILEADIVGEEHYKVANQVTEILQKYKELQDIIAILGM 386

Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419
               D   DKA V +   I  FL Q
Sbjct: 387 EELSD--EDKATVMRARKIQKFLSQ 409


>gi|108563495|ref|YP_627811.1| F0F1 ATP synthase subunit beta [Helicobacter pylori HPAG1]
 gi|107837268|gb|ABF85137.1| ATP synthase F1, subunit beta [Helicobacter pylori HPAG1]
 gi|307637801|gb|ADN80251.1| ATP synthase beta chain [Helicobacter pylori 908]
 gi|325996399|gb|ADZ51804.1| ATP synthase beta chain [Helicobacter pylori 2018]
 gi|325997987|gb|ADZ50195.1| ATP synthase beta subunit [Helicobacter pylori 2017]
          Length = 469

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|296273869|ref|YP_003656500.1| ATP synthase F1 subunit beta [Arcobacter nitrofigilis DSM 7299]
 gi|296098043|gb|ADG93993.1| ATP synthase F1, beta subunit [Arcobacter nitrofigilis DSM 7299]
          Length = 464

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 8/316 (2%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           + +   G  ++       GR+ N +G P+D  +++ +      I    P    +    + 
Sbjct: 69  ECIAQGGPIQVPVGEAVLGRIFNVIGDPVDEGEAIPEETPRWSIHRAAPTFEEQSTKAEM 128

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201
           F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + VGER RE
Sbjct: 129 FETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTRE 188

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
             +   +    N L K  +      E P  R    LT +T+AEYF   KG +VL+ +D+I
Sbjct: 189 GNDLYHEMKDSNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFVDNI 248

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RFA S  E++   G +P A GY  ++ SE+ +L ERI  +   KG+IT+V +V V  D+
Sbjct: 249 FRFAQSGSEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTAKGSITSVQAVYVPADD 306

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
             DP   SV + LD   VLNR +AE+G YP VDPL S SR L+      +       +  
Sbjct: 307 LTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSSSRILSADILGQEHYNTARGVQS 366

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 367 VLQKYKDLQDIIAILG 382


>gi|1703680|sp|P50002|ATPB_ACEWO RecName: Full=ATP synthase subunit beta, sodium ion specific;
           AltName: Full=Na(+)-translocating ATPase subunit beta
 gi|501149|gb|AAA79908.1| F1FO ATPase beta subunit [Acetobacterium woodii DSM 1030]
 gi|1096934|prf||2113197B Na ATPase:ISOTYPE=beta
          Length = 466

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+PIDG       D+ M  + + PP+   Q+ + + F+TGI+V+D+  P   G
Sbjct: 88  GRMFNVLGEPIDGK-PFDTKDVVMHPIHRHPPSFEEQQTQPEMFETGIKVVDLICPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   + +    + K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGERTREGNDLYYEMMESGVINKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    L  +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 ALCFGQMNEPPGARMRIALAGLTMAEYFRDDEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +   KG+IT+V +V    D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTSKGSITSVQAVYDPADDLTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++ E+G YP VDPL S SR+ D K    +  +    +  ++ R++E +DI  I G
Sbjct: 325 VLSRAITEKGIYPAVDPLDSTSRILDPKIVGQEHYETAREVQEILQRYKELQDIIAILG 383


>gi|258646348|ref|ZP_05733817.1| ATP synthase F1, beta subunit [Dialister invisus DSM 15470]
 gi|260403746|gb|EEW97293.1| ATP synthase F1, beta subunit [Dialister invisus DSM 15470]
          Length = 477

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 163/311 (52%), Gaps = 9/311 (2%)

Query: 91  GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           GR   +P    C GR+ N LG+ +D DD+         I    P   ++    + F+TGI
Sbjct: 84  GRAIAAPVGDGCLGRIFNVLGQTVDNDDTKVPASDYWPIHRPAPAFKDQSPATEIFETGI 143

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206
           +V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGER RE  +  
Sbjct: 144 KVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCSVFCGVGERTREGNDLW 203

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
            +      L K  +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF  
Sbjct: 204 GEMKDSGVLSKVALVYGQMNEPPGARMRVALTGLTMAEYFRDKQGQDVLLFVDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
              V + LD   VL+RS+AE G YP VDPL S SR+ D     +E  ++   +  ++ R+
Sbjct: 322 PAGVFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNVLGEEHYEVARGVQAILQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|312869606|ref|ZP_07729757.1| ATP synthase F1, beta subunit [Lactobacillus oris PB013-T2-3]
 gi|311094892|gb|EFQ53185.1| ATP synthase F1, beta subunit [Lactobacillus oris PB013-T2-3]
          Length = 475

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+P+D     G     M I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGEPVDNGPEFGPDAKRMPIHRDAPKYDELNNNTEILETGIKVIDLLAPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      L+K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPL S S  L  +    +  ++ + + H++ R+ E +DI  I   
Sbjct: 325 NLERRLTQIGIYPAVDPLESTSTALTPEIVGKEHYEVATQVQHVLQRYHELQDIISI--- 381

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V +   I +FL QS
Sbjct: 382 -LGMDELSDEEKTIVARARRIQNFLSQS 408


>gi|259503682|ref|ZP_05746584.1| ATP synthase F1 sector subunit beta [Lactobacillus antri DSM 16041]
 gi|259168314|gb|EEW52809.1| ATP synthase F1 sector subunit beta [Lactobacillus antri DSM 16041]
          Length = 475

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+P+D     G     M I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGEPVDNGPEFGPDAKRMPIHRDAPKYDELNNNTEILETGIKVIDLLAPYVRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      L+K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPL S S  L  +    +  ++ + + H++ R+ E +DI  I   
Sbjct: 325 NLERRLTQIGIYPAVDPLESTSTALTPEIVGKEHYEVATQVQHVLQRYHELQDIISI--- 381

Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420
             G+D + D+    V +   I +FL QS
Sbjct: 382 -LGMDELSDEEKTIVARARRIQNFLSQS 408


>gi|15645746|ref|NP_207923.1| F0F1 ATP synthase subunit beta [Helicobacter pylori 26695]
 gi|2493023|sp|P55988|ATPB_HELPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2314283|gb|AAD08174.1| ATP synthase F1, subunit beta (atpD) [Helicobacter pylori 26695]
          Length = 469

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEVATGIQQVLQKYKDLQDIIAILG 385


>gi|210135291|ref|YP_002301730.1| F0F1 ATP synthase subunit beta [Helicobacter pylori P12]
 gi|226740207|sp|B6JMX2|ATPB_HELP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|210133259|gb|ACJ08250.1| ATP synthase F1 subunit beta [Helicobacter pylori P12]
          Length = 469

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEVATGIQQVLQKYKDLQDIIAILG 385


>gi|91201498|emb|CAJ74558.1| strongly similar to ATP synthase subunit beta [Candidatus Kuenenia
           stuttgartiensis]
          Length = 471

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LGKPID  +D   K  L +    + PP+   R+      +TG++VID+  P  
Sbjct: 93  LGRIFNLLGKPIDTKEDFEAKNYLPIH---RAPPSFEERETTTTVLETGLKVIDLLAPFA 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    RS   +       + VGER RE  + ++E      + 
Sbjct: 150 RGGKIGLFGGAGVGKTVLIMELIRSIATEHGGYSAFAGVGERTREGNDLWLEMKESGVID 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 210 KTVLVFGQMNEPPGARLRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFVQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +    LD 
Sbjct: 270 RMPSAVGYQPTLATEMGDLQERI--TTTKKGSITSLQAVYVPADDFTDPAPVTTFPHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            I L+R +AE G YP VDPL S SR+ D +    +  ++   +  ++ RF+E +D   I 
Sbjct: 328 TIALSRQIAELGIYPAVDPLRSTSRILDPRILGQEHYEVAREVQRILQRFKELQDFIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|58040595|ref|YP_192559.1| F0F1 ATP synthase subunit beta [Gluconobacter oxydans 621H]
 gi|81819018|sp|Q5FNZ3|ATPB2_GLUOX RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|58003009|gb|AAW61903.1| ATP synthase beta chain [Gluconobacter oxydans 621H]
          Length = 486

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 151/278 (54%), Gaps = 13/278 (4%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151
            R+       GR+++  G P D   +L   D+    +   PPAM  +      F+TG++V
Sbjct: 91  LRVPVGEAVVGRMLDVTGIPRDNGPAL-PADVPRRAIHSDPPAMQTENASTDIFETGVKV 149

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFI 206
           +D+ TPL HG +  +F G+G+GK+ L      +M A+       I + VGER RE  E +
Sbjct: 150 LDLLTPLAHGGKAAMFGGAGVGKTVLTMELIHAMAAKYQGLS--IFTGVGERSREGHEML 207

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
            D  G   ++ +V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D+I RF  
Sbjct: 208 SDMNGSGVIRHAVLVYGQMNEPPGARWRVPLTALAIAEYFRDEQHKNVLLLMDNIYRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E+++  G LP   GY +++ +E+  + ERI  +      +TA+ +V V  D+  DP 
Sbjct: 268 AGSELSSLLGRLPSRVGYQSTLATEVGAVEERI--TSVAGAAVTAIQTVYVPADDFTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             ++ + +D  IVL+R LA +G YP VDPLAS S L D
Sbjct: 326 VTAIATHMDSQIVLSRDLAAQGFYPAVDPLASSSVLLD 363


>gi|291561953|emb|CBL40761.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 463

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 167/312 (53%), Gaps = 11/312 (3%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D V   G   +       GR+ N LG+PID  ++  K +  + I  K P    +    + 
Sbjct: 72  DAVATGGPIMVPVGEQTLGRIFNVLGQPIDNKEAP-KTEKKLPIHCKAPSFEEQSTETEI 130

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +     + + VGER RE
Sbjct: 131 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTRE 190

Query: 202 VREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDS 258
             +   + + D+  + K+ +V    +E P  R    LT +T+AEYF  +G  +VLL +D+
Sbjct: 191 GNDLYYE-MSDSGVINKTTMVFGQMNEPPGSRMRVGLTGLTMAEYFRDEGGKDVLLFIDN 249

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D
Sbjct: 250 IFRFSQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPAD 307

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D     +E  K+   + 
Sbjct: 308 DLTDPAPANTFTHLDATTVLSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVARGVQ 367

Query: 378 HLIHRFEETRDI 389
            ++ R++E +DI
Sbjct: 368 EVLQRYKELQDI 379


>gi|328954125|ref|YP_004371459.1| ATP synthase subunit beta [Desulfobacca acetoxidans DSM 11109]
 gi|328454449|gb|AEB10278.1| ATP synthase subunit beta [Desulfobacca acetoxidans DSM 11109]
          Length = 470

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N +GKP+DG  ++   +    I    P  +++    K  +TG++VID+  P   G
Sbjct: 90  LGRVLNVVGKPVDGLGTVEAKNY-YTIHRPAPAFVDQDTTVKVLETGVKVIDLLVPFPRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +       IS+   VGER RE  + ++E      L K 
Sbjct: 149 GKMGMFGGAGVGKTVIMMEMVHNIAMHHGGISVFAGVGERTREGNDLYLEMKHSGVLPKC 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            ++     E P  R    LT +T AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 ALIYGQMTEPPGARARVALTGLTAAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ ++L  L ERI  +  +KG+IT+V  V V  D+  DP   +  + LDG +
Sbjct: 269 PSAVGYQPTLGTDLGELQERI--TSTKKGSITSVQCVYVPADDLTDPAPATTFAHLDGTV 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     +E   VS    +I  +++E +DI  I G
Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPMVLGEEHYRVSRQVQMILQKYKELQDIIAILG 385


>gi|258406332|ref|YP_003199074.1| ATP synthase F1, beta subunit [Desulfohalobium retbaense DSM 5692]
 gi|257798559|gb|ACV69496.1| ATP synthase F1, beta subunit [Desulfohalobium retbaense DSM 5692]
          Length = 468

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDG----DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR++N +G+P+D     DDS+     +M I  + P  +++    +  +TGI+V+D+  P
Sbjct: 91  LGRIMNVVGRPVDEAGPIDDSI-----TMPIHREAPELVDQNTAVELLETGIKVVDLLIP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYL-GDN 213
              G ++G+F G+G+GK+ +L     +   +   K + + VGER RE  +  E+      
Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKEHGGKSVFAGVGERTREGNDLYEEMKEAGV 205

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           +  + ++    +E P  R    LTA+T AEYF   +G++VLL +D+I RF  +  E++  
Sbjct: 206 INNAALIYGQMNEPPGARARVALTALTCAEYFRDEEGEDVLLFIDNIFRFTQAGMEVSAL 265

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ ++L  L ERI  +  +KG+IT+V +V V  D+  DP   +  S L
Sbjct: 266 LGRMPSAVGYQPTLGTDLGELQERI--TSTQKGSITSVQAVYVPADDLTDPAPATTFSHL 323

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           DG +VL+R +AE G YP VDPL S SR+ D      +  ++   +  ++ ++++ +DI  
Sbjct: 324 DGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVLGTEHYQVARGVQQVLQKYKDLQDIIA 383

Query: 392 IGG 394
           I G
Sbjct: 384 ILG 386


>gi|197120311|ref|YP_002140738.1| F0F1 ATP synthase subunit beta [Geobacter bemidjiensis Bem]
 gi|322421875|ref|YP_004201098.1| ATP synthase F1 subunit beta [Geobacter sp. M18]
 gi|226740204|sp|B5EFI7|ATPB_GEOBB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|197089671|gb|ACH40942.1| ATP synthase F1, beta subunit [Geobacter bemidjiensis Bem]
 gi|320128262|gb|ADW15822.1| ATP synthase F1, beta subunit [Geobacter sp. M18]
          Length = 470

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +G  +    I  + P  +N+    + F TGI+V+D+  P   G
Sbjct: 92  LGRILNVIGEPVDEMGPIGN-EKEYGIHREAPLFVNQSTKVEAFTTGIKVVDLLAPYARG 150

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  + ++E      L 
Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGVLD 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+A++IAEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 209 KAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 269 RIPSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHLDA 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D     DE   ++  + +++ ++++ +DI  I 
Sbjct: 327 TTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGDEHYAIARQVQYVLQKYKDLQDIIAIL 386

Query: 394 G 394
           G
Sbjct: 387 G 387


>gi|157737829|ref|YP_001490513.1| F0F1 ATP synthase subunit beta [Arcobacter butzleri RM4018]
 gi|315637619|ref|ZP_07892825.1| ATP synthase F1 sector beta subunit [Arcobacter butzleri JV22]
 gi|226739974|sp|A8EV70|ATPB_ARCB4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157699683|gb|ABV67843.1| ATP synthase F1 sector, beta subunit [Arcobacter butzleri RM4018]
 gi|315478073|gb|EFU68800.1| ATP synthase F1 sector beta subunit [Arcobacter butzleri JV22]
          Length = 464

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 158/310 (50%), Gaps = 8/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N +G P+D   ++        I    P    +    + F+TGI+
Sbjct: 75  GPIKVPVGEAVLGRIFNVIGDPVDEGSAIPADTERWSIHRSAPTFEEQSTKTEMFETGIK 134

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207
           V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   
Sbjct: 135 VVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYH 194

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +    N L K  +      E P  R    LT +T+AEYF   KG +VL+ +D+I RFA S
Sbjct: 195 EMKDSNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFIDNIFRFAQS 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+ +L ERI  +   KG+IT+V +V V  D+  DP  
Sbjct: 255 GSEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTSKGSITSVQAVYVPADDLTDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            SV + LD   VLNR +AE+G YP VDPL S SR L+      +       +  ++ +++
Sbjct: 313 ASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSADIIGQEHYNTARGVQSVLQKYK 372

Query: 385 ETRDIRLIGG 394
           + +DI  I G
Sbjct: 373 DLQDIIAILG 382


>gi|77918557|ref|YP_356372.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380]
 gi|118573499|sp|Q3A605|ATPB1_PELCD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|77544640|gb|ABA88202.1| ATP synthase F1 subcomplex beta subunit [Pelobacter carbinolicus
           DSM 2380]
          Length = 468

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + + D + EI    P  +++    + F+TGI+V+D+  P   G
Sbjct: 90  LGRILNVIGEPVDEQGPV-ETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARG 148

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
            +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  +   +    N L 
Sbjct: 149 GKIGLFGGAGVGKTVLIMELIHNIAKKHGGFS--VFAGVGERTREGNDLWNEMKESNVLD 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 207 KTALVYGQMNEPPGARARVALSALTVAEYFRDQENQDVLLFVDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 267 RIPSAVGYQPTLSTEMGELQERI--TTTKNGSITSVQAIYVPADDLTDPAPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D     +E   V+  + +++ R+++ +DI  I 
Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSSSRILDPQVLGEEHYQVARDVQYVLQRYKDLQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|152990964|ref|YP_001356686.1| F0F1 ATP synthase subunit beta [Nitratiruptor sp. SB155-2]
 gi|166201722|sp|A6Q4C0|ATPB_NITSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151422825|dbj|BAF70329.1| F0F1-type ATP synthase, beta subunit [Nitratiruptor sp. SB155-2]
          Length = 469

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID  + L +      I    PP   +   E+ F+TGI+V+D+  P   G
Sbjct: 90  LGRIFNVIGDTIDEGEPL-QAKTYWSIHRSAPPFEEQSTKEEIFETGIKVVDLLAPYKKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ ++     +  +      + + VGER RE  +   +    N L K 
Sbjct: 149 GKTGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYYEMKESNVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AEYF  + G +VL+ +D+I R+A +  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRYAQAGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ RL ERI  +  +KG+IT++ +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLASEMGRLQERI--TSTKKGSITSIQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 327 VLNRRIAEKGIYPAVDPLDSTSRMLDPNIVGEEHYKVARGVQAVLQKYKDLQDIIAILG 385


>gi|138896935|ref|YP_001127388.1| F0F1 ATP synthase subunit beta [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249752|ref|ZP_03148448.1| ATP synthase F1, beta subunit [Geobacillus sp. G11MC16]
 gi|166201707|sp|A4ITI9|ATPB_GEOTN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134268448|gb|ABO68643.1| ATP synthase beta subunit [Geobacillus thermodenitrificans NG80-2]
 gi|196210628|gb|EDY05391.1| ATP synthase F1, beta subunit [Geobacillus sp. G11MC16]
          Length = 473

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 173/331 (52%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID  D +   +   + + +  P       E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLQDDI-PAEARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +  S LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTSKGSITSIQAIYVPADDYTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R LAE G YP VDPLAS SR LA +    +  ++   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARRVQQTLQRYKELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + D+    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|148266273|ref|YP_001232979.1| F0F1 ATP synthase subunit beta [Geobacter uraniireducens Rf4]
 gi|189081335|sp|A5G9D8|ATPB_GEOUR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146399773|gb|ABQ28406.1| ATP synthase F1 subcomplex beta subunit [Geobacter uraniireducens
           Rf4]
          Length = 470

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 164/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G P+D    +G  +    I  + P  +++    + F TGI+V+D+  P   G
Sbjct: 92  LGRILNVIGDPVDEMGPVG-AEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +         + + VGER RE  + ++E      L+K+
Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAMQHGGFSVFAGVGERTREGNDLWMEMKESGVLEKT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+A++IAEYF   +G NVLL +D+I RF  +  E++   G +
Sbjct: 211 ALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFIDNIFRFTQAGSEVSALLGRI 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 271 PSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     +E   ++  + +++ ++++ +DI  I G
Sbjct: 329 VLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQVQYVLQKYKDLQDIIAILG 387


>gi|116494662|ref|YP_806396.1| F0F1 ATP synthase subunit beta [Lactobacillus casei ATCC 334]
 gi|191638161|ref|YP_001987327.1| F0F1 ATP synthase subunit beta [Lactobacillus casei BL23]
 gi|239631737|ref|ZP_04674768.1| ATP synthase subunit beta [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066221|ref|YP_003788244.1| F0F1-type ATP synthase subunit beta [Lactobacillus casei str.
           Zhang]
 gi|122263917|sp|Q03A18|ATPB_LACC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740211|sp|B3WDL8|ATPB_LACCB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116104812|gb|ABJ69954.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus casei ATCC
           334]
 gi|190712463|emb|CAQ66469.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Lactobacillus casei BL23]
 gi|239526202|gb|EEQ65203.1| ATP synthase subunit beta [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438628|gb|ADK18394.1| F0F1-type ATP synthase, beta subunit [Lactobacillus casei str.
           Zhang]
 gi|327382192|gb|AEA53668.1| F1F0-ATPase subunit beta [Lactobacillus casei LC2W]
          Length = 488

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PIDG ++ G       I    P   +     +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+ +
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L R L E+G YP VDPL S S         DE  K+ + +  ++ R+ E +DI
Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDI 380


>gi|222823236|ref|YP_002574809.1| ATP synthase F1 sector, beta subunit [Campylobacter lari RM2100]
 gi|254808137|sp|B9KES3|ATPB_CAMLR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222538457|gb|ACM63558.1| ATP synthase F1 sector, beta subunit [Campylobacter lari RM2100]
          Length = 484

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N  G  ID  + +   D    I    PP   +    + F+TGI+V+D+  P   G 
Sbjct: 88  GRIFNVTGDLIDEGEEI-NFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K  
Sbjct: 147 KVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVA 206

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G +P
Sbjct: 207 LCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD   V
Sbjct: 267 SAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           LNRS+AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 325 LNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|332971779|gb|EGK10727.1| ATP synthase F1 sector beta subunit [Desmospora sp. 8437]
          Length = 469

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 160/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID  D + + +    I    P   N    E+  +TGI+V+D+  P   G
Sbjct: 92  LGRVFNVLGDPIDEQDQV-QSETHYSIHRPAPSYENLSTQEEVLETGIKVVDLLAPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      L+K+
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNVALQHGGLSVFAGVGERTREGNDLYHEMKDAGVLEKT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE+F   +G +VL  +D+I RF  +  E++   G +
Sbjct: 211 TMVFGQMNEPPGARMRVALTGLTMAEFFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRM 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 271 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            L RSLA +  +P VDPLAS SR+   A   +E   V+  +  ++ R++E +DI  I G
Sbjct: 329 NLERSLAAKAIFPAVDPLASTSRILTPAVVGEEHYSVARGVQEVLQRYKELQDIIAILG 387


>gi|77920721|ref|YP_358536.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380]
 gi|118573500|sp|Q39ZU1|ATPB3_PELCD RecName: Full=ATP synthase subunit beta 3; AltName: Full=ATP
           synthase F1 sector subunit beta 3; AltName:
           Full=F-ATPase subunit beta 3
 gi|77546804|gb|ABA90366.1| ATP synthase F1 subcomplex beta subunit [Pelobacter carbinolicus
           DSM 2380]
          Length = 468

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + + D + EI    P  +++    + F+TGI+V+D+  P   G
Sbjct: 90  LGRILNVIGEPVDEQGPV-ETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARG 148

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
            +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  +   +    N L 
Sbjct: 149 GKIGLFGGAGVGKTVLIMELIHNIAKKHGGFS--VFAGVGERTREGNDLWNEMKESNVLD 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 207 KTALVYGQMNEPPGARARVALSALTVAEYFRDQENQDVLLFVDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 267 RIPSAVGYQPTLSTEMGELQERI--TTTKHGSITSVQAIYVPADDLTDPAPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D     +E   V+  + +++ R+++ +DI  I 
Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSSSRILDPQVLGEEHYQVARDVQYVLQRYKDLQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|308189785|ref|YP_003922716.1| ATP synthase beta chain [Mycoplasma fermentans JER]
 gi|319777003|ref|YP_004136654.1| ATP synthase subunit beta [Mycoplasma fermentans M64]
 gi|238809784|dbj|BAH69574.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624527|gb|ADN68832.1| ATP synthase beta chain [Mycoplasma fermentans JER]
 gi|318038078|gb|ADV34277.1| ATP synthase subunit beta [Mycoplasma fermentans M64]
          Length = 502

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ + LG+PID  ++  K  L M I +  P    ++ V +  +TGI+VID+  P   G
Sbjct: 118 LGRMFDVLGQPIDLQEA-PKAPL-MPIHASAPSYEEQKTVSEVLETGIKVIDLLIPYAKG 175

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      L K+
Sbjct: 176 GKIGLFGGAGVGKTVLVQELINNIATEHGGLSVFAGVGERTREGNDLYHEMKAAGVLDKT 235

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +
Sbjct: 236 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKENQDVLLFIDNIFRFTQAGSEVSALLGRM 295

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   +G+IT+V +V V  D+  DP   +  S LD   
Sbjct: 296 PSAVGYQPTLATEMGQLQERI--TSTRRGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 353

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S SRL D      E  ++   + +++ RF+E +DI  I G
Sbjct: 354 VLDRNIAALGIYPAVDPLESNSRLLDPLVVGQEHYEVAHGVVNILQRFKELQDIIAILG 412


>gi|317011330|gb|ADU85077.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SouthAfrica7]
          Length = 466

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + + K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRIFNVVGESIDNLEPI-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDKKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382


>gi|154173677|ref|YP_001408809.1| F0F1 ATP synthase subunit beta [Campylobacter curvus 525.92]
 gi|190358268|sp|A7H017|ATPB_CAMC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|112803722|gb|EAU01066.1| ATP synthase F1, beta subunit [Campylobacter curvus 525.92]
          Length = 465

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID  + + + D    I    PP   +    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVVGDLIDEGEGV-EFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD   
Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR++AE+G YP VDPL S SR+ D +    D  K+   +  ++ ++++ +DI  I G
Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQILGEDHYKVARGVQAVLQKYKDLQDIIAILG 382


>gi|56421893|ref|YP_149211.1| F0F1 ATP synthase subunit beta [Geobacillus kaustophilus HTA426]
 gi|261420763|ref|YP_003254445.1| F0F1 ATP synthase subunit beta [Geobacillus sp. Y412MC61]
 gi|297531558|ref|YP_003672833.1| ATP synthase F1 subunit beta [Geobacillus sp. C56-T3]
 gi|319768433|ref|YP_004133934.1| ATP synthase F1 subunit beta [Geobacillus sp. Y412MC52]
 gi|81819603|sp|Q5KUJ3|ATPB_GEOKA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56381735|dbj|BAD77643.1| F0F1-type ATP synthasebeta chain [Geobacillus kaustophilus HTA426]
 gi|261377220|gb|ACX79963.1| ATP synthase F1, beta subunit [Geobacillus sp. Y412MC61]
 gi|297254810|gb|ADI28256.1| ATP synthase F1, beta subunit [Geobacillus sp. C56-T3]
 gi|317113299|gb|ADU95791.1| ATP synthase F1, beta subunit [Geobacillus sp. Y412MC52]
          Length = 473

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 19/332 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID +  +   D   + + +  P       E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-- 213
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHE-MKDSGV 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           + K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++  
Sbjct: 208 ISKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +  S L
Sbjct: 268 LGRMPSAVGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D    L R LAE G YP VDPLAS SR LA +    +  ++   +   + R++E +DI  
Sbjct: 326 DATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIA 385

Query: 392 IGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
           I     G+D + D+    VH+   I  FL Q+
Sbjct: 386 I----LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|148377622|ref|YP_001256498.1| F0F1 ATP synthase subunit beta [Mycoplasma agalactiae PG2]
 gi|148291668|emb|CAL59054.1| ATP synthase beta chain [Mycoplasma agalactiae PG2]
          Length = 487

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ + LG PID  D+       M I +  P    +    + F+TGI+VID+  P   G
Sbjct: 99  LGRMFDVLGNPIDLKDA--PDAEKMPIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + L    L+K+
Sbjct: 157 GKIGLFGGAGVGKTVLVQELINNIAREHGGLSVFAGVGERTREGNDLYNEMLASGVLEKT 216

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +
Sbjct: 217 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRM 276

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  + K  G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 277 PSAVGYQPTLATEMGQLQERIASTNK--GSITSVQAVYVPADDLTDPAPATTFNHLDAKT 334

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S SRL D      E  +    +  ++ RF+E +DI  I G
Sbjct: 335 VLDRNIAALGIYPAVDPLESSSRLLDSLVIGQEHYETARRVVSILQRFKELQDIIAILG 393


>gi|148245074|ref|YP_001219768.1| F0F1 ATP synthase subunit beta [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166222425|sp|A5CVI6|ATPB_VESOH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146326901|dbj|BAF62044.1| F0F1-type ATP synthase beta subunit [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 459

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 160/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ ++   I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGEPIDNAGEIGQ-EVDWTIHRSAPDYDELAPTTELLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+         + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIAHSGYSVFAGVGERTREGNDFYHEMKESNVLNKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ SE+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D     +E   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGVQGVLQRYKELKDIIAILG 377


>gi|297380310|gb|ADI35197.1| ATP synthase F1, beta subunit [Helicobacter pylori v225d]
          Length = 469

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + + K  L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPI-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|269123790|ref|YP_003306367.1| ATP synthase F1, beta subunit [Streptobacillus moniliformis DSM
           12112]
 gi|268315116|gb|ACZ01490.1| ATP synthase F1, beta subunit [Streptobacillus moniliformis DSM
           12112]
          Length = 464

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 166/316 (52%), Gaps = 9/316 (2%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D++   G  ++       GR+ N LG+ +D  D +   +    I  K P    ++   + 
Sbjct: 68  DVIDTGGPIKVPVGKETLGRIFNVLGETVDNGDEIITEE-RHSIHKKAPEFEEQETHSEI 126

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE
Sbjct: 127 LETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTRE 186

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSI 259
            R+   +      + K+ +V    +E P  R    L+A+T+AEYF  K G NVLL +D+I
Sbjct: 187 GRDLYNEMRESGVINKTALVYGQMNEPPGARLRVALSALTMAEYFRDKEGQNVLLFIDNI 246

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+
Sbjct: 247 FRFTQAGSEVSALLGRMPSAVGYQPNLATDMGALQERI--TSTKKGSITSVQAVYVPADD 304

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
             DP   +  S LD   VL+R +A  G YP VDPLAS SR+ +     +E  K+      
Sbjct: 305 LTDPAPATTFSHLDATTVLSRQIASLGIYPAVDPLASTSRILEAEIVGNEHYKVARETVK 364

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R++E +DI  I G
Sbjct: 365 VLQRYKELQDIIAILG 380


>gi|313681887|ref|YP_004059625.1| ATP synthase f1 subcomplex beta subunit [Sulfuricurvum kujiense DSM
           16994]
 gi|313154747|gb|ADR33425.1| ATP synthase F1 subcomplex beta subunit [Sulfuricurvum kujiense DSM
           16994]
          Length = 466

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 162/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG D +   D +  I    PP +++    + F+TGI+V+D+  P   G 
Sbjct: 88  GRIFNVIGETIDGGDQITDCD-TWSIHRDPPPLVDQSTKTEMFETGIKVVDLLAPYGKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+ ++     +       +S+   VGER RE  +   +    + L K  
Sbjct: 147 KVGLFGGAGVGKTVIIMELINNVAQGHSGLSVFAGVGERTREGNDLYHEMKESSVLDKVA 206

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +      E P  R    LT +T+AEYF   KG +VL+ +D+I RFA S  E++   G +P
Sbjct: 207 LCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFIDNIFRFAQSGSEMSALLGRIP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L +RI  +  +KG+IT+V +V V  D+  DP   SV + LD   V
Sbjct: 267 SAVGYQPTLAREMGALQDRI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATTV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           LNR +AE+G YP VDPL S SRL D     +E   V+  +   + ++++ +DI  I G
Sbjct: 325 LNRKIAEKGIYPAVDPLDSTSRLLDPQIIGEEHYNVARGVQKTLQKYKDLQDIIAILG 382


>gi|42558884|sp|Q9LA80|ATPB_GEOTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|7578511|gb|AAF64075.1|AF147781_1 ATP synthase beta subunit [Geobacillus thermoleovorans]
          Length = 473

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 173/331 (52%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID +  +   D   + + +  P       E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +  S LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R LAE G YP VDPLAS SR LA +    +  ++   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + D+    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|238917847|ref|YP_002931364.1| ATP synthase [Eubacterium eligens ATCC 27750]
 gi|238873207|gb|ACR72917.1| ATP synthase [Eubacterium eligens ATCC 27750]
          Length = 475

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID +    +    M I  K P    +    +  +TGI+V+D+  P   G 
Sbjct: 101 GRMFNVLGEPID-NKPAPEVQEHMPIHRKAPAFAEQATNTEILETGIKVVDLLCPYQKGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   + +    ++K+ 
Sbjct: 160 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMMESGVIEKTT 219

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    L  +T+AEYF  KG  +VLL +D+I RF  +  E++   G +P
Sbjct: 220 MVFGQMNEPPGARMRVGLAGLTMAEYFRDKGGKDVLLFIDNIYRFTQAGSEVSALLGRMP 279

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 280 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 337

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+ E G YP VDPL S SR+ D     +E  K+  S+  ++ +++E +DI  I G
Sbjct: 338 LSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVARSVQEILQKYKELQDIIAILG 395


>gi|187777253|ref|ZP_02993726.1| hypothetical protein CLOSPO_00805 [Clostridium sporogenes ATCC
           15579]
 gi|187774181|gb|EDU37983.1| hypothetical protein CLOSPO_00805 [Clostridium sporogenes ATCC
           15579]
          Length = 462

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG PID        + S  I  +  P+   Q VE   F+TGI+VID+  P   
Sbjct: 86  LGRLFNVLGNPIDEVGEFTSNE-SYPI-HRSAPSFEEQSVEPEIFETGIKVIDLLAPYQK 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      L+K
Sbjct: 144 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEK 203

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G +
Sbjct: 204 TALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRI 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     +E   V+  + +++ R+ E +DI  I G
Sbjct: 322 VLSRSIAELGIYPAVDPLESSSRMLDPRIIGEEHYDVAIKVKNILERYRELQDIIAILG 380


>gi|94986847|ref|YP_594780.1| F0F1 ATP synthase subunit beta [Lawsonia intracellularis
           PHE/MN1-00]
 gi|118573693|sp|Q1MRB8|ATPB_LAWIP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|94731096|emb|CAJ54458.1| proton ATPase beta subunit [Lawsonia intracellularis PHE/MN1-00]
          Length = 471

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 178/336 (52%), Gaps = 14/336 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLS- 125
           DIV    +   E +  G  V   G   ++P      GR++N +G+PIDG   LG  D   
Sbjct: 56  DIVRTIAMDATEGLKRGMDVLDTGHPIMAPVGKASLGRIMNVVGQPIDG---LGVIDTKT 112

Query: 126 -MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I  K P  +++    +  +TGI+VID+  P   G ++G+F G+G+GK+ +L     +
Sbjct: 113 YLPIHRKPPSFLDQNTSVEPLETGIKVIDLLVPFPKGGKMGLFGGAGVGKTVILMEMINN 172

Query: 185 DCFDKVIISL---VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVT 240
                  IS+   VGER RE  +   +      L+K+++V    +E P  R    LTA+T
Sbjct: 173 IARQHGGISVFAGVGERTREGNDLYHEMKEAGVLEKAILVYGQMNEPPGARSRVALTALT 232

Query: 241 IAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  
Sbjct: 233 CAEYFRDEEHQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLGTDLGSLEERI-- 290

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +    G+IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR
Sbjct: 291 TSTHNGSITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSR 350

Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + +  +  +E   V+  +  ++ +++E +DI  I G
Sbjct: 351 ILEPNFVGEEHYTVARGVQKILQKYKELQDIIAILG 386


>gi|226324289|ref|ZP_03799807.1| hypothetical protein COPCOM_02069 [Coprococcus comes ATCC 27758]
 gi|225206737|gb|EEG89091.1| hypothetical protein COPCOM_02069 [Coprococcus comes ATCC 27758]
          Length = 611

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 173/325 (53%), Gaps = 13/325 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID  + + K D    ++ + PP+   Q  V +  +TGI+VID+  P   G
Sbjct: 90  GRLFNVLGETIDNGEEI-KEDTEHWVIHRDPPSFEDQSPVVEILETGIKVIDLLAPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      L K+
Sbjct: 149 GKIGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLWTEMKASGVLDKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF  K   NVLL +D+I RF  +  E++   G +
Sbjct: 209 ALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G++T+V +V V  D+  DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGELQERIAST--KNGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R + E+G YP VDPL S SR+ +     +E  ++ + +T ++ +++E +DI  I G 
Sbjct: 327 VLSRKVVEQGIYPAVDPLESNSRILEADIVGEEHYEVANRVTEVLQKYKELQDIIAILGM 386

Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419
               D   DKA V +   I  FL Q
Sbjct: 387 EELSD--EDKATVMRARKIQKFLSQ 409


>gi|226324167|ref|ZP_03799685.1| hypothetical protein COPCOM_01946 [Coprococcus comes ATCC 27758]
 gi|225207716|gb|EEG90070.1| hypothetical protein COPCOM_01946 [Coprococcus comes ATCC 27758]
          Length = 463

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 175/335 (52%), Gaps = 12/335 (3%)

Query: 68  DIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           DIV    +G  + +  G D V   G   +       GR+ N LG+PID  ++    D+  
Sbjct: 54  DIVRCIAMGPTDGLVRGMDAVATGGPISVPVGEATLGRIFNVLGEPIDEKEA--PKDVEY 111

Query: 127 EIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + +  P+   Q  + +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 112 APIHRKAPSFEEQATQTEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNI 171

Query: 186 CFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
             +     + + VGER RE  + + E      +KK+ +V    +E P  R    LT +T+
Sbjct: 172 ATEHGGYSVFTGVGERTREGNDLYYEMTESGVIKKTAMVFGQMNEPPGARMRVGLTGLTL 231

Query: 242 AEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF  KG  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 232 AEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--T 289

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT+V +V V  D+  DP   +  + LD   VL+R++ E G YP VDPL S SR+
Sbjct: 290 STKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAITELGIYPAVDPLESTSRI 349

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            D     +E  K+   +  ++ +++E +DI  I G
Sbjct: 350 LDPHIVGEEHYKVARGVQEILQKYKELQDIIAILG 384


>gi|237751193|ref|ZP_04581673.1| ATP synthase subunit beta [Helicobacter bilis ATCC 43879]
 gi|229372559|gb|EEO22950.1| ATP synthase subunit beta [Helicobacter bilis ATCC 43879]
          Length = 469

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 160/294 (54%), Gaps = 9/294 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ +D  + + K  +   I  + P   N+    + F+TGI+V+D+  P   G
Sbjct: 89  LGRIFNVIGEVVDDGEPV-KAAVKWPIHRESPSFDNQSTKTEMFETGIKVVDLLAPYSKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  +   +      L K 
Sbjct: 148 GKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 208 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  + G+IT+V +V V  D+  DP   SV S LD   
Sbjct: 268 PSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQAVYVPADDLTDPAPASVFSHLDAKT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VLNR +AE+G YP VDPL S SR+ D     +E  K+ + +  ++ ++++ +DI
Sbjct: 326 VLNRKIAEKGIYPAVDPLDSSSRILDPQVVGEEHYKIATGIQQVLQKYKDLQDI 379


>gi|160872202|ref|ZP_02062334.1| ATP synthase F1, beta subunit [Rickettsiella grylli]
 gi|159121001|gb|EDP46339.1| ATP synthase F1, beta subunit [Rickettsiella grylli]
          Length = 463

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 165/299 (55%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GR+++ LGKPID    + + ++ + I  K PP  + Q V E+  +TGI+VID+  P   
Sbjct: 88  LGRIMDVLGKPIDEAGPIHE-EIRLPIHRK-PPTFSEQAVNEQLLETGIKVIDLLCPFAK 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K
Sbjct: 146 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AEYF  +G ++LL +D+I R+  +  E++   G +
Sbjct: 206 VSLVYGQMNEPPGNRLRVALTGLTVAEYFRDEGRDILLFIDNIYRYTLAGVEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +
Sbjct: 266 PSAVGYQPTLAAEMGALQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATV 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP +DPL S SR  D      E   V+ ++   + RF+E +DI  I G
Sbjct: 324 VLSRQIAELGIYPAIDPLDSNSRQLDPLIVGQEHYDVARAVQKTLQRFKELKDIIAILG 382


>gi|291320299|ref|YP_003515561.1| ATP synthase subunit beta [Mycoplasma agalactiae]
 gi|290752632|emb|CBH40605.1| ATP synthase beta chain [Mycoplasma agalactiae]
          Length = 487

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ + LG PID  D+       M I +  P    +    + F+TGI+VID+  P   G
Sbjct: 99  LGRMFDVLGNPIDLKDA--PDAEKMPIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + L    L+K+
Sbjct: 157 GKIGLFGGAGVGKTVLVQELINNIAREHGGLSVFAGVGERTREGNDLYNEMLASGVLEKT 216

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +
Sbjct: 217 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRM 276

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  + K  G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 277 PSAVGYQPTLATEMGQLQERIASTNK--GSITSVQAVYVPADDLTDPAPATTFNHLDAKT 334

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S SRL D      E  +    +  ++ RF+E +DI  I G
Sbjct: 335 VLDRNIAALGIYPAVDPLESSSRLLDPLVIGQEHYETARRVVSILQRFKELQDIIAILG 393


>gi|186475894|ref|YP_001857364.1| F0F1 ATP synthase subunit beta [Burkholderia phymatum STM815]
 gi|184192353|gb|ACC70318.1| ATP synthase F1, beta subunit [Burkholderia phymatum STM815]
          Length = 489

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 164/306 (53%), Gaps = 11/306 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ +  G   D    L + D+    + + PPA+  QR   + F TGI++ID+ TPL HG
Sbjct: 103 GRLFDVSGTVRDSGAPLPR-DVERRAIHRAPPALAAQRGATRLFATGIKMIDLLTPLAHG 161

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +  +F G+G+GK+ L+     +       IS+   VGER RE  E + D      L ++
Sbjct: 162 GKAAMFGGAGVGKTVLVMELIHAMAEQHSGISVFAGVGERSREGHEMLADMRSSGVLPRA 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R   PLTA+TIAEYF  +   NVLL++D++ RF  +  E++   G +
Sbjct: 222 VLVYGQMNEPPGARWRVPLTALTIAEYFRDEHHQNVLLLMDNVFRFVQAGAEVSGLLGRM 281

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ SE+  L ERI  +   +  +TA+ +V V  D+  DP   ++ S +D  +
Sbjct: 282 PSRVGYQPTLASEVAALQERI--ASVGETAVTAIEAVYVPADDFTDPAVTTISSHVDSMV 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRD-IRLIGG 394
           VL+R+ A EG YP +DP+AS S L D     DE   + +++  +I    E +D I L+G 
Sbjct: 340 VLSRAQAAEGMYPAIDPIASTSVLLDPLVVGDEHADVANAVRRVIEHQRELQDVIALLGI 399

Query: 395 YRPGVD 400
              G D
Sbjct: 400 EELGAD 405


>gi|109947169|ref|YP_664397.1| F0F1 ATP synthase subunit beta [Helicobacter acinonychis str.
           Sheeba]
 gi|123362703|sp|Q17Y78|ATPB_HELAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|109714390|emb|CAJ99398.1| ATP synthase F1 sector beta subunit [Helicobacter acinonychis str.
           Sheeba]
          Length = 466

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L K  L   I  K P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRIFNVVGESIDNLEPL-KPSLIWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382


>gi|118579930|ref|YP_901180.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379]
 gi|190358235|sp|A1AP52|ATPB2_PELPD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|118502640|gb|ABK99122.1| ATP synthase F1 subcomplex beta subunit [Pelobacter propionicus DSM
           2379]
          Length = 471

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 12/319 (3%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G+   +P      GR+IN +G+P+D    +G  D    I  + PP  ++    
Sbjct: 73  GQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGN-DKENPIHREAPPFEDQSTKV 131

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198
           + F TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  AR      V    VGER
Sbjct: 132 EAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARQHGGFSVFAG-VGER 190

Query: 199 GREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
            RE  + ++E      L+K+ +V    +E P  R    LTA++IAE+F   +G +VLL +
Sbjct: 191 TREGNDLWMEMKETGVLEKTALVYGQMNEPPGARARVALTALSIAEHFRDDEGLDVLLFI 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V ++ V 
Sbjct: 251 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTKNGSITSVQAIYVP 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   ++  
Sbjct: 309 ADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQIIGEEHYAIARQ 368

Query: 376 LTHLIHRFEETRDIRLIGG 394
           + +++ ++++ +DI  I G
Sbjct: 369 VQYILQKYKDLQDIIAILG 387


>gi|307729793|ref|YP_003907017.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1003]
 gi|307584328|gb|ADN57726.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1003]
          Length = 496

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 164/294 (55%), Gaps = 10/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+I+  G   DG D+L        I    PP  +++     F TGI+VID+ TPL  G 
Sbjct: 107 GRLIDVTGTACDGGDALDTQVERRPIHRAAPPLSSQKGATVLFSTGIKVIDLLTPLAQGG 166

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +  +F G+G+GK+ L+   + A  + ++ + + + +GER RE  E + D +G +  L ++
Sbjct: 167 KAAMFGGAGVGKTVLVMELIHAMVEHYEGISVFAGIGERSREGHEMLLD-MGTSGVLART 225

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R   P TA+TIAEYF   +  NVLL++D++ RF  +  E++   G +
Sbjct: 226 VLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRM 285

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ SE+ +L ERI        +++A+ +V V  D+  DP   ++ + LD ++
Sbjct: 286 PSRVGYQPTLASEVAQLQERI--VSVGGVSVSAIEAVYVPADDFTDPAVTAIAAHLDSNV 343

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
           VL+R++A EG YP VDP+AS S L D      E   V++ +  +I  + E +D+
Sbjct: 344 VLSRAMAAEGMYPAVDPIASSSILLDPLVVGGEHAAVATEVRRVIEHYRELQDV 397


>gi|322434786|ref|YP_004216998.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX9]
 gi|321162513|gb|ADW68218.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX9]
          Length = 479

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 164/308 (53%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV+N LG+P+D    LG     + M I  + P    +   E+ F+TGI+VID+  P  
Sbjct: 93  LGRVLNVLGEPVD---ELGPVNAKVHMPIHRQAPAFDEQSTSEEMFETGIKVIDLIQPFL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ ++     +         + + VGER RE      EF E  + D
Sbjct: 150 KGGKIGLFGGAGVGKTVVIQELINNVAQQHGGFSVFAGVGERTREGNDLWHEFQESGVID 209

Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
               N  K+ ++     E P  R    LT +T+AEYF   +G + LL +D+I RF  +  
Sbjct: 210 INDFNKSKAALIYGQMTEPPGARLRVALTGLTVAEYFRDEEGADTLLFIDNIFRFTQAGS 269

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++T  G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 270 EVSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKKGSITSVQAVYVPADDLTDPAPAT 327

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R L+E G YP VDPLAS SR L+ +    +   +   +  ++ R+++ 
Sbjct: 328 TFAHLDATTVLSRPLSELGIYPAVDPLASTSRILSPRVVGQEHYDVAQGVKRILQRYKDL 387

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 388 QDIIAILG 395


>gi|308183236|ref|YP_003927363.1| F0F1 ATP synthase subunit beta [Helicobacter pylori PeCan4]
 gi|308065421|gb|ADO07313.1| F0F1 ATP synthase subunit beta [Helicobacter pylori PeCan4]
          Length = 469

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID  + L    L+  I  K P    +    + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVVGESIDNLEPLNP-SLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG +VL+ +D+I R+A S  E++   G +
Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  ++   G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR L+ +       ++ + +  ++ ++++ +DI  I G
Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385


>gi|302875870|ref|YP_003844503.1| ATP synthase F1, beta subunit [Clostridium cellulovorans 743B]
 gi|307689303|ref|ZP_07631749.1| F0F1 ATP synthase subunit beta [Clostridium cellulovorans 743B]
 gi|302578727|gb|ADL52739.1| ATP synthase F1, beta subunit [Clostridium cellulovorans 743B]
          Length = 466

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 166/305 (54%), Gaps = 18/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRV-EKGFKTGIRVIDIF 155
              GR+ N LG+PID      KG++  + M  +   PP+   Q   ++ F+TGI+VID+ 
Sbjct: 86  ATLGRLFNTLGQPIDN-----KGEVVSDTMYPIHRNPPSFEDQSSKQEMFETGIKVIDLL 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + + D
Sbjct: 141 APYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYHE-MSD 199

Query: 213 N--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           +  + K+ +V    +E P  R    LT +T+AE F  KG +VLL +D+I RF  +  E++
Sbjct: 200 SGVISKTALVFGQMNEPPGARMRVALTGLTMAENFRDKGQDVLLFIDNIFRFTQAGSEVS 259

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 260 ALLGRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFA 317

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R++ E G YP VDPL S SR+ D      E  +    + +++ R++E +DI
Sbjct: 318 HLDATTVLSRAIVEIGIYPAVDPLESTSRILDPRIVGKEHYETALEVKNILERYKELQDI 377

Query: 390 RLIGG 394
             I G
Sbjct: 378 IAILG 382


>gi|323339972|ref|ZP_08080239.1| ATP synthase F1 sector beta subunit [Lactobacillus ruminis ATCC
           25644]
 gi|323092614|gb|EFZ35219.1| ATP synthase F1 sector beta subunit [Lactobacillus ruminis ATCC
           25644]
          Length = 467

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PID      +      I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGEPIDNGPEFEEDHRRDPIHRDAPSYEELSTGTEILETGIKVIDLLAPYIKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYYEMKESGVLEKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L R+L ++G YP VDPLAS S  L+ +    +  ++ + + H++ R+ E +DI
Sbjct: 325 NLERALTQQGIYPAVDPLASTSSALSPEIVGEEHYQVATEVQHVLQRYRELQDI 378


>gi|82701444|ref|YP_411010.1| F0F1 ATP synthase subunit beta [Nitrosospira multiformis ATCC
           25196]
 gi|118573707|sp|Q2YCA3|ATPB1_NITMU RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|82409509|gb|ABB73618.1| ATP synthase F1, beta subunit [Nitrosospira multiformis ATCC 25196]
          Length = 459

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 169/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G +V + G + R+       GR+++ LG PID    +G  + +  
Sbjct: 49  VVRTIALGSSEGLRRGMMVTNTGDQIRVPVGTKTLGRIMDVLGTPIDEMGPIG-AEQNRS 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 108 IHQKAPAFDELSASTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 167

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           +F  +G +VLL +D+I RF  +  E++   G +P A GY  ++  E+ RL ERI  +  +
Sbjct: 228 HFRDEGRDVLLFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTK 285

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 286 SGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               +E      ++   + R++E RDI  I G
Sbjct: 346 LVVGEEHYSTARAVQQTLQRYKELRDIIAILG 377


>gi|182420269|ref|ZP_02951498.1| ATP synthase F1, beta subunit [Clostridium butyricum 5521]
 gi|237666447|ref|ZP_04526432.1| ATP synthase F1, beta subunit [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182375864|gb|EDT73456.1| ATP synthase F1, beta subunit [Clostridium butyricum 5521]
 gi|237657646|gb|EEP55201.1| ATP synthase F1, beta subunit [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 463

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N LG PID  ++ G        + +  P+   Q VE + F+TGI+VID+  P   
Sbjct: 87  LGRLFNVLGNPID--NAGGVDAKESYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAPYQK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G + G+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      + K
Sbjct: 145 GGKTGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYHEMKDSGVIDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    LT +T+AEYF  KG +VLL +D+I RF  +  E++   G  
Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALLGRT 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTVNGSITSVQAVYVPADDLTDPAPATTFTHLDAKT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+ E G YP VDPL S SR+ D     DE  K+ + + +++ ++++ +DI  I G
Sbjct: 323 VLSRSIVELGIYPAVDPLESSSRMLDPRIVGDEHYKVATEVKNVLEKYKQLQDIIAILG 381


>gi|327385389|gb|AEA56863.1| F1F0-ATPase subunit beta [Lactobacillus casei BD-II]
          Length = 587

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG PIDG ++ G       I    P   +     +  +TGI+VID+  P   G 
Sbjct: 189 GRVFNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGG 248

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+ + 
Sbjct: 249 KVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENTA 308

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 309 MVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 368

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    
Sbjct: 369 SAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTN 426

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L R L E+G YP VDPL S S         DE  K+ + +  ++ R+ E +DI
Sbjct: 427 LERRLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDI 479


>gi|118474804|ref|YP_892659.1| F0F1 ATP synthase subunit beta [Campylobacter fetus subsp. fetus
           82-40]
 gi|190358269|sp|A0RR26|ATPB_CAMFF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118414030|gb|ABK82450.1| ATP synthase F1, beta subunit [Campylobacter fetus subsp. fetus
           82-40]
          Length = 465

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 165/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N +G  ID G++   K D    I  + PPA   Q  +   F+TGI+V+D+  P  
Sbjct: 87  LGRIFNVIGDLIDEGEEE--KFDKKWSI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYA 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L 
Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESGVLD 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K  +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G
Sbjct: 204 KVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ SE+ RL ERI  +  +KG+IT+V +V V  D+  DP   +V + LD 
Sbjct: 264 RIPSAVGYQPTLASEMGRLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VLNR++AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I 
Sbjct: 322 TTVLNRAIAEKGIYPAVDPLDSTSRMLDPQILGEEHYKIARGVQAVLQKYKDLQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|118579045|ref|YP_900295.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379]
 gi|190358211|sp|A1ALL7|ATPB1_PELPD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|118501755|gb|ABK98237.1| ATP synthase F1 subcomplex beta subunit [Pelobacter propionicus DSM
           2379]
          Length = 471

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 12/319 (3%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G+   +P      GR+IN +G+P+D    +G  D    I  + PP  ++    
Sbjct: 73  GQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGN-DKENPIHREAPPFEDQSTKV 131

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198
           + F TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  AR      V    VGER
Sbjct: 132 EAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARQHGGFSVFAG-VGER 190

Query: 199 GREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
            RE  + ++E      L+K+ +V    +E P  R    LTA++IAE+F   +G +VLL +
Sbjct: 191 TREGNDLWMEMKETGVLEKTALVYGQMNEPPGARARVALTALSIAEHFRDDEGLDVLLFI 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V ++ V 
Sbjct: 251 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTKNGSITSVQAIYVP 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   ++  
Sbjct: 309 ADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQ 368

Query: 376 LTHLIHRFEETRDIRLIGG 394
           + +++ ++++ +DI  I G
Sbjct: 369 VQYILQKYKDLQDIIAILG 387


>gi|223038732|ref|ZP_03609025.1| ATP synthase F1, beta subunit [Campylobacter rectus RM3267]
 gi|222880134|gb|EEF15222.1| ATP synthase F1, beta subunit [Campylobacter rectus RM3267]
          Length = 465

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID  + + + D    I    PP   +    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVVGDLIDEGEGI-EFDKKWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD   
Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR++AE+G YP VDPL S SR+ D +    +  K+   +  ++ ++++ +DI  I G
Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQILGGEHYKVARGVQAVLQKYKDLQDIIAILG 382


>gi|169335794|ref|ZP_02862987.1| hypothetical protein ANASTE_02219 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258532|gb|EDS72498.1| hypothetical protein ANASTE_02219 [Anaerofustis stercorihominis DSM
           17244]
          Length = 470

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 167/299 (55%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           GR++N LG+PIDG + +   D+ +  + +  P+    Q V + F+TGI+V+D+  P   G
Sbjct: 88  GRMVNVLGQPIDGKE-MDLSDVKLSPIHREAPSFEEMQTVPEIFETGIKVVDLICPYTKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      L K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELISNIATEHGGLSVFAGVGERTREGNDLYYEMKESGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AE+F   +  +VLL +D+I RF  +  E++   G +
Sbjct: 207 SLCFGQMNEPPGARMRVALTGLTMAEHFRDEENQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R+++E+G YP VDPL S SR+ D K    +  ++   +  ++ R++E +DI  I G
Sbjct: 325 VLDRAISEKGIYPAVDPLGSTSRILDPKVVGEEHYQIARGVQEILQRYKELQDIIAILG 383


>gi|255321979|ref|ZP_05363129.1| ATP synthase F1, beta subunit [Campylobacter showae RM3277]
 gi|255301083|gb|EET80350.1| ATP synthase F1, beta subunit [Campylobacter showae RM3277]
          Length = 465

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID  + + + D    I    PP   +    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVVGDLIDEGEGV-EFDKKWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD   
Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR++AE+G YP VDPL S SR+ D +    +  K+   +  ++ ++++ +DI  I G
Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQILGGEHYKVARGVQAVLQKYKDLQDIIAILG 382


>gi|240047755|ref|YP_002961143.1| F0F1 ATP synthase subunit beta [Mycoplasma conjunctivae HRC/581]
 gi|239985327|emb|CAT05340.1| ATP synthase subunit beta [Mycoplasma conjunctivae]
          Length = 473

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 177/338 (52%), Gaps = 16/338 (4%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G+ ++        R+ N LG+PIDG +   +  L   I +  P  + ++   +   TGI+
Sbjct: 80  GQIKVPVGKEVLSRMFNVLGQPIDGGEKT-QFSLKHSIHAAPPSYLEQKTTSEILVTGIK 138

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FI 206
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + 
Sbjct: 139 VVDLLIPFVKGGKIGLFGGAGVGKTVLVQELINNIATQHGGLSVFAGVGERSREGNDLYF 198

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E      L K+ +V    +ESP  R    L+A+T+AEYF   +  +VLL +D+I RF  +
Sbjct: 199 EMKAAGVLDKTALVFGQMNESPGARMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQA 258

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++T  G +P   GY  ++ +E+ +L ERI  +    G+IT++ +V V  D+  DP  
Sbjct: 259 GSEVSTLLGRIPSTVGYQPTLATEMGQLQERI--TSTRSGSITSIQAVYVPADDITDPAP 316

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  S LD   VL+R++A  G YP VDPLAS SR+ + A    +   V+  +   + RF+
Sbjct: 317 ATTFSHLDAKTVLDRNIAALGIYPAVDPLASSSRILEPAVVGQKHYDVARQVIKTLQRFK 376

Query: 385 ETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           E +DI  I     GVD + +   K V +   I +FL Q
Sbjct: 377 ELQDIISI----LGVDELAEEDKKIVARARRIRNFLSQ 410


>gi|188587434|ref|YP_001918979.1| ATP synthase F1, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352121|gb|ACB86391.1| ATP synthase F1, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 475

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 162/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N  G  IDG   + +G+    I    P   +++   +  +TGI+V+D+  P  
Sbjct: 98  STLGRVFNITGDTIDGQGEV-EGEDYYPIHRDSPKFEDQETSTEILETGIKVLDLLVPYA 156

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI-EDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+  ++     + S VGER RE  + + E      + 
Sbjct: 157 RGGKIGLFGGAGVGKTVLIQELIRNIAYEHGGFSVFSGVGERTREGNDLVLEMSESGVID 216

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  + +E++   G
Sbjct: 217 KTALVFGQMNEPPGARMRVGLTGLTMAEYFRDNEGQDVLLFIDNIFRFTQAGQEVSALMG 276

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG++T++ ++ V  D+  DP   +  + LD 
Sbjct: 277 RMPSAVGYQPTLQTEMGELQERI--TSTKKGSVTSIQAIYVPADDPTDPAPATTFAHLDA 334

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
              L RS+AE G YP VDPL S SR+ D      E   V+  +  ++ R++E +DI  I 
Sbjct: 335 STYLERSIAEMGIYPAVDPLVSSSRILDPQIVGQEHYDVARGVQQVLQRYKELQDIIAIL 394

Query: 394 G 394
           G
Sbjct: 395 G 395


>gi|269925185|ref|YP_003321808.1| ATP synthase F1, beta subunit [Thermobaculum terrenum ATCC BAA-798]
 gi|269788845|gb|ACZ40986.1| ATP synthase F1, beta subunit [Thermobaculum terrenum ATCC BAA-798]
          Length = 471

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ + LG+P+D    +   D    I    P    +    + F+TG++VID+  P  
Sbjct: 89  ATLGRIFDVLGQPVDEKGPV-NADERWPIHRPAPEFEEQSTEAEVFETGLKVIDLIAPFT 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G + GVF G+G+GK+ ++     +       +S+   VGER RE  +  E+      L 
Sbjct: 148 RGGKTGVFGGAGVGKTVIIMELINNVAKQHSGVSVFAGVGERTREGTQLYEEMTESGVLG 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            +V+V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 208 STVLVFGQMNEPPGARLRVGLTGLTMAEYFRDVEGRDVLLFMDNIFRFVQAGSEVSALLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  ++G IT+V +V V  D++ DP   +  + LD 
Sbjct: 268 RMPSAVGYQPTLATEMGQLQERI--TSTKRGAITSVQAVYVPADDYTDPAPATTFAHLDA 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            I L RS+AE G YP VDPLAS SR+ D     +E  ++   +  ++ R+++ +DI  I 
Sbjct: 326 TIALERSIAERGIYPAVDPLASTSRILDPRIVGEEHYEVARGVQRVLQRYKDLQDIIAIL 385

Query: 394 G 394
           G
Sbjct: 386 G 386


>gi|23100430|ref|NP_693897.1| F0F1 ATP synthase subunit beta [Oceanobacillus iheyensis HTE831]
 gi|81845990|sp|Q8EM83|ATPB_OCEIH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|22778663|dbj|BAC14931.1| H(+)-transporting ATP synthase beta chain [Oceanobacillus iheyensis
           HTE831]
          Length = 464

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 163/302 (53%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D+ L +G     I  + P   N     +  +TGI+V+D+  P  
Sbjct: 84  VTLGRVFNVLGEKIDLDEPLEEGVRRDPIHREAPDFENLSTETEILETGIKVVDLLAPYI 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +
Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 203 AKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFVDNIFRFTQAGSEVSALL 262

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD
Sbjct: 263 GRMPSAVGYQPTLATEMGQLQERI--TSTDKGSVTSIQAIYVPADDYTDPAPATTFAHLD 320

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
               L+R L+E+G YP VDPL S SR  D      E  ++ + +   + ++ E +DI  I
Sbjct: 321 ATTNLDRKLSEQGIYPAVDPLESTSRALDPEVVGKEHYEVATEVQQTLQKYRELQDIIAI 380

Query: 393 GG 394
            G
Sbjct: 381 LG 382


>gi|147679147|ref|YP_001213362.1| F0F1 ATP synthase subunit beta [Pelotomaculum thermopropionicum SI]
 gi|190358698|sp|A5CYE2|ATPB_PELTS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146275244|dbj|BAF60993.1| F0F1-type ATP synthase, beta subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 470

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 165/313 (52%), Gaps = 20/313 (6%)

Query: 96  SPSAC-----WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           +P  C       GR+++ LG+PIDG   +   D    I    PP + +    +  +TGI+
Sbjct: 81  APITCPVGRPTLGRLVDVLGQPIDGKGPI-ISDKRYPIHRPAPPLVEQSTKAEQLETGIK 139

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VR 203
           VID+  P   G +IG+F G+G+GK+ ++     +       IS+   VGER RE     R
Sbjct: 140 VIDLLVPFLKGGKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYR 199

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
           E  E  +   L K+ +V    +E P  R    LT + +AEYF   +G + LL +D+I RF
Sbjct: 200 EMTEAGV---LDKTTMVFGQMNEPPGARLRVALTGLCLAEYFRDEEGADTLLFIDNIFRF 256

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+ ++ ERI  +   KG++T+V +V V  D+  D
Sbjct: 257 TQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTVKGSVTSVQAVYVPADDLTD 314

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LDG +VL+R +AE G YP VDPL S SR+ D     +E  +    +  ++ 
Sbjct: 315 PAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTSRILDPLVVGNEHYQTARGVQKVLQ 374

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 375 RYKELQDIIAILG 387


>gi|210613760|ref|ZP_03289874.1| hypothetical protein CLONEX_02081 [Clostridium nexile DSM 1787]
 gi|210150969|gb|EEA81977.1| hypothetical protein CLONEX_02081 [Clostridium nexile DSM 1787]
          Length = 463

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 161/294 (54%), Gaps = 11/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+PID  +     D+  E + +  P+   Q  E +  +TGI+V+D+  P   G
Sbjct: 90  GRIFNVLGEPID--EKPAPTDVEYEPIHRKAPSFEEQATEAEMLETGIKVVDLLCPYQKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +     + + VGER RE  + + E      + K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMQESGVINKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAKV 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+R++ E G YP VDPL S SR+ D     +E  K+   +  ++ +++E +DI
Sbjct: 326 VLSRAITELGIYPAVDPLDSSSRMLDPNIVGEEHYKVARGVQEVLQKYKELQDI 379


>gi|118573692|sp|Q38WK5|ATPB_LACSS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 476

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 158/295 (53%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+ IDG +     D   + + +  P            +TGI+VID+  P   
Sbjct: 87  LGRVFNVLGETIDGGEEF-PADFRRDSIHRSAPKFEELNTSSEILETGIKVIDLLAPYVR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+K
Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLEK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +ESP  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNESPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             L+R L ++G YP V+PL S S   D      E  ++ S + H++ R+ E +DI
Sbjct: 324 TNLDRKLTQQGIYPAVNPLESSSSALDPEIVGQEHYEVASEVQHVLQRYRELQDI 378


>gi|220932616|ref|YP_002509524.1| ATP synthase F1, beta subunit [Halothermothrix orenii H 168]
 gi|219993926|gb|ACL70529.1| ATP synthase F1, beta subunit [Halothermothrix orenii H 168]
          Length = 487

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID    +   +  + I    P    ++   + F+TGI+VID+  P   G
Sbjct: 107 LGRLFNVLGEPIDKQGPVDTEE-KLPIHRPAPSYEEQETTTEVFETGIKVIDLLAPYAKG 165

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +     + S VGER RE  + ++E    D L K 
Sbjct: 166 GKVGLFGGAGVGKTVLIQELIHNIAIEHGGYSVFSGVGERTREGNDLWLEFQEADILDKV 225

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF  +  E++   G +
Sbjct: 226 ALVFGQMNEPPGARMRVGLTGLTMAEYFRDKEGQDVLLFIDNIFRFIQAGSEVSALLGRM 285

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  ++ +L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 286 PSAVGYQPTLAVDVGQLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 343

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE+G YP VDPL S SR+ +     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 344 VLSRQIAEKGIYPAVDPLDSTSRILEPGVIGEEHYKVARQVQEVLQQYKDLQDIIAILG 402


>gi|81428735|ref|YP_395735.1| F0F1 ATP synthase subunit beta [Lactobacillus sakei subsp. sakei
           23K]
 gi|78610377|emb|CAI55427.1| H(+)-transporting two-sector ATPase (ATP synthase), beta subunit
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 483

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 158/295 (53%), Gaps = 10/295 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+ IDG +     D   + + +  P            +TGI+VID+  P   
Sbjct: 94  LGRVFNVLGETIDGGEEF-PADFRRDSIHRSAPKFEELNTSSEILETGIKVIDLLAPYVR 152

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+K
Sbjct: 153 GGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLEK 212

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +ESP  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 213 TAMVFGQMNESPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 272

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 273 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 330

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             L+R L ++G YP V+PL S S   D      E  ++ S + H++ R+ E +DI
Sbjct: 331 TNLDRKLTQQGIYPAVNPLESSSSALDPEIVGQEHYEVASEVQHVLQRYRELQDI 385


>gi|170694208|ref|ZP_02885363.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
 gi|170140948|gb|EDT09121.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
          Length = 490

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 161/295 (54%), Gaps = 12/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+I+  G+  DG ++L        I    PP  +++   + F TGI+VID+  PL  G 
Sbjct: 101 GRLIDVTGRACDGGEALPSQIERRPIHRAAPPLASQKGTTELFSTGIKVIDLLAPLAQGG 160

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           +  +F G+G+GK+ L+     +M  R +     + + VGER RE  E + D      L +
Sbjct: 161 KAAMFGGAGVGKTVLVMELIHAMVERYEGIS--VFAGVGERSREGHEMLLDMRTSGVLAR 218

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R   P TA+TIAEYF   +  NVLL++D++ R+  +  E++   G 
Sbjct: 219 TVLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRYVQAGAEVSGLLGR 278

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ SE+ +L ERI        +++A+ +V V  D+  DP   ++ + LD +
Sbjct: 279 MPSRVGYQPTLASEVAQLQERI--VSVGGVSVSAIEAVYVPADDFTDPAVTAIAAHLDSN 336

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
           +VL+R++A EG YP VDP+AS S L D     +E   V++ +  +I  + E +D+
Sbjct: 337 VVLSRAMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRVIEHYRELQDV 391


>gi|293399933|ref|ZP_06644079.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306333|gb|EFE47576.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 466

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+ IDG   LG+   S  + I  K P    +Q   +  +TGI+VID+  P   
Sbjct: 89  GRMFNVLGREIDG---LGEVKTSKRLPIHRKAPSFDEQQTSAEMLETGIKVIDLLCPYSK 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +   K +++ VGER RE  +   +      L K
Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVTGVGERTREGNDMYHEMKDSGVLDK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +ESP  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G 
Sbjct: 206 TVLVYGQMNESPGARMRVGLTGLTMAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPATAFTHLDAK 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +A  G YP VDPL S SR+ D     +E  ++   +  ++ R++E +DI  I G
Sbjct: 324 TVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQQILQRYKELQDIIAILG 383


>gi|269114800|ref|YP_003302563.1| ATP synthase subunit beta [Mycoplasma hominis]
 gi|268322425|emb|CAX37160.1| ATP synthase beta chain [Mycoplasma hominis ATCC 23114]
          Length = 495

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 157/297 (52%), Gaps = 10/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+PID    + K    M I    P    ++   + F+TGI+VID+  P   G +
Sbjct: 116 RMFNVLGEPIDQKGGVFKH--KMPIHRAAPSYEEQKSTLEIFETGIKVIDLLVPYIKGGK 173

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      L+K+ +
Sbjct: 174 IGLFGGAGVGKTVLIQELINNIAKQHGGLSVFAGVGERTREGNDLYHEMQASGVLEKTAL 233

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R  AP TA+TIAEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 234 VFGQMNEPPGARMRAPFTALTIAEYFRDVMHQDVLLFIDNIFRFTQAGSEVSALLGRMPS 293

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+ +L ERI  +    G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 294 AVGYQPTLAVEMGQLQERI--TSTNNGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 351

Query: 339 NRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP +DPLAS SR+ D      +      ++ +++ RF+E +DI  I G
Sbjct: 352 DRDIAALGIYPAIDPLASSSRMVDPNIIGLEHYNTARAVQNILQRFKELQDIIAILG 408


>gi|302390542|ref|YP_003826363.1| ATP synthase F1 subcomplex beta subunit [Thermosediminibacter
           oceani DSM 16646]
 gi|302201170|gb|ADL08740.1| ATP synthase F1 subcomplex beta subunit [Thermosediminibacter
           oceani DSM 16646]
          Length = 489

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 15/302 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+PID    +   +    I    PP   ++  E+ F+TGI+V+D+  P   G
Sbjct: 108 LGRVFNVLGEPIDDIRGVEVRE-RWPIHRPAPPFEEQETGEEIFETGIKVLDLLAPYPRG 166

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN----L 214
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  E    +LG      L
Sbjct: 167 GKIGLFGGAGVGKTVLIMELIRNIATEHRGYSVFAGVGERTREGNEL---WLGMKASGVL 223

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
           +K+V+V    +E P  R    LTA+T+AEYF  + G +VLL +D+I R+  +  E++   
Sbjct: 224 EKTVLVFGQMNEPPGARMRVALTALTMAEYFRDELGQDVLLFIDNIFRYIQAGSEVSALL 283

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  ++  L ERI  +  +KG IT+V +V V  D+  DP   +  + LD
Sbjct: 284 GRIPSAVGYQPTLAVDVGMLQERI--TSTKKGAITSVQAVYVPADDLTDPAPATAFAHLD 341

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
              VL+R +AE G YP VDPL S SR+ D     ++   V+  +  ++ R+ E +DI  I
Sbjct: 342 ATTVLSRQVAEMGLYPAVDPLDSTSRILDPRIVGEKHYAVAMGVQKILQRYRELQDIIAI 401

Query: 393 GG 394
            G
Sbjct: 402 LG 403


>gi|313891352|ref|ZP_07824968.1| ATP synthase F1, beta subunit [Dialister microaerophilus UPII
           345-E]
 gi|313120127|gb|EFR43303.1| ATP synthase F1, beta subunit [Dialister microaerophilus UPII
           345-E]
          Length = 477

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 9/311 (2%)

Query: 91  GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           GR    P    C GR+ N LG+ +D      K      I    P   ++    + F+TGI
Sbjct: 84  GRAIAVPVGDGCLGRIFNVLGQTVDNGTEEVKASDYWPIHRAAPAFKDQAPAAEIFETGI 143

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206
           +V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGER RE  +  
Sbjct: 144 KVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCSVFCGVGERTREGNDLW 203

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
            +      L K+ +V    +E P  R    LT +T++EYF  K G +VLL +D+I RF  
Sbjct: 204 GEMKESGVLSKAALVYGQMNEPPGARMRVALTGLTMSEYFRDKQGQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSITSVQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
              V + LD   VLNRS+AE G YP VDPL S SR+ D     +E  ++   +  ++ R+
Sbjct: 322 PAGVFTHLDATTVLNRSIAELGIYPAVDPLDSTSRILDPNTLGEEHYEVARGVQAILQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|153811248|ref|ZP_01963916.1| hypothetical protein RUMOBE_01640 [Ruminococcus obeum ATCC 29174]
 gi|149832746|gb|EDM87830.1| hypothetical protein RUMOBE_01640 [Ruminococcus obeum ATCC 29174]
          Length = 463

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 164/302 (54%), Gaps = 11/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPL 158
           C  GR+ N LG+ +DG +SL   D    ++ + PP+   Q+   +  +TGI+VID+  P 
Sbjct: 83  CTLGRLFNVLGETVDGGESLD--DAEHWVIHRDPPSFEEQKPAVEILETGIKVIDLLAPY 140

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+    ++   +     I + VGER RE  +   +      L
Sbjct: 141 AKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVL 200

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R     T +T+AEYF  ++  +VLL +D+I RF  +  E++   
Sbjct: 201 KKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDTEHRDVLLFIDNIFRFVQAGSEVSALL 260

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +    G++T+V +V V  D+  DP   +  + LD
Sbjct: 261 GRMPSAVGYQPTLATEMGELQERIASTTS--GSVTSVQAVYVPADDLTDPAPATTFAHLD 318

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I
Sbjct: 319 ATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYEVARRVQEILQKYKELQDIIAI 378

Query: 393 GG 394
            G
Sbjct: 379 LG 380


>gi|332295443|ref|YP_004437366.1| ATP synthase subunit beta [Thermodesulfobium narugense DSM 14796]
 gi|332178546|gb|AEE14235.1| ATP synthase subunit beta [Thermodesulfobium narugense DSM 14796]
          Length = 473

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 165/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG  +D    +   + S   + K PP++ +   V +  +TGI+VID+  P   
Sbjct: 91  LGRIFNVLGNTVDDGPKVEAKNFSP--LHKAPPSLRDINPVPQQLETGIKVIDLLVPFPR 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ +L    R+   +   K + + VGER RE  +   +      + K
Sbjct: 149 GGKIGLFGGAGVGKTVILMELIRNIAAEHGGKSVFAGVGERTREGNDLYHEMKASGVIDK 208

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS--KGDNVLLILDSITRFAHSIREIATNSG 274
           +V+V    +E P  R    LT +T+AEYF    K D VLL +D+I RF  +  E++T  G
Sbjct: 209 TVMVFGQMNELPGARMRVGLTGLTMAEYFRDVDKAD-VLLFIDNIFRFVQAASEVSTLLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            LP A GY  ++ +++  L ERI     + G+IT+V +V V  D+  DP   +  + LDG
Sbjct: 268 RLPSAVGYQPTLGTDVGSLQERI--VTTKDGSITSVQAVYVPADDLTDPAPATTFAHLDG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R LAE G YP VDPL S SR+ D     +E  LV+  +  ++ ++++ +DI  I 
Sbjct: 326 TVVLSRPLAELGIYPAVDPLDSTSRILDPRVVGEEHYLVARGVQKVLQKYKDLQDIIAIL 385

Query: 394 G 394
           G
Sbjct: 386 G 386


>gi|171779638|ref|ZP_02920594.1| hypothetical protein STRINF_01475 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281740|gb|EDT47174.1| hypothetical protein STRINF_01475 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 468

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 167/316 (52%), Gaps = 11/316 (3%)

Query: 87  VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144
           VF  GR   +       GRV N LG  ID D+   + D   E + K  PA +        
Sbjct: 73  VFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPRETIHKKAPAFDELSTSSEI 131

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE
Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I
Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D+
Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L R L + G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ E +DI  I G
Sbjct: 370 VLQRYRELQDIIAILG 385


>gi|306833169|ref|ZP_07466299.1| ATP synthase F1 sector beta subunit [Streptococcus bovis ATCC
           700338]
 gi|304424743|gb|EFM27879.1| ATP synthase F1 sector beta subunit [Streptococcus bovis ATCC
           700338]
          Length = 468

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 168/316 (53%), Gaps = 11/316 (3%)

Query: 87  VFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144
           VF  GR    P      GRV N LG+ ID D+   + D   E + K  PA +        
Sbjct: 73  VFDTGRAISVPVGKETLGRVFNVLGETIDLDEPFAE-DAPREPIHKKAPAFDELSTSSEI 131

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE
Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I
Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D+
Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L R L + G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ E +DI  I G
Sbjct: 370 VLQRYRELQDIIAILG 385


>gi|57504649|ref|ZP_00370727.1| ATP synthase F1, beta subunit [Campylobacter coli RM2228]
 gi|57019418|gb|EAL56113.1| ATP synthase F1, beta subunit [Campylobacter coli RM2228]
          Length = 465

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N  G  ID  + +   D    I  + PPA   Q  +   F+TGI+V+D+  P   
Sbjct: 87  LGRIFNVTGDLIDEGEEI-SFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K
Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
             +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G 
Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD  
Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VLNRS+AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 323 TVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|162447836|ref|YP_001620968.1| F-type H+-transporting ATPase subunit beta [Acholeplasma laidlawii
           PG-8A]
 gi|190358283|sp|A9NGW2|ATPB_ACHLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161985943|gb|ABX81592.1| F-type H+-transporting ATPase beta chain [Acholeplasma laidlawii
           PG-8A]
          Length = 460

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 170/329 (51%), Gaps = 18/329 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N LGKP+DG D +      M I  K+PP  +    E    +TGI+VID+  P   
Sbjct: 84  LGRMLNVLGKPMDGLDEVDT-KRYMPI-HKLPPDFHDLGGETEILETGIKVIDLIAPYIK 141

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  E   +      L K
Sbjct: 142 GGKIGLFGGAGVGKTVLIQEMIHNVAKNHGGISVFTGVGERVREGHELYHEMKDSGVLDK 201

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +  NVLL +D+I R+  +  EI+   G 
Sbjct: 202 TALVFGQMNEPPGARLRVALTGLTLAEYFRDGEKQNVLLFIDNIYRYIQAGSEISALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +    G+IT++ +V V  D++ DP   +V S LD  
Sbjct: 262 MPSAVGYQPTLATEMGKLQERI--TSTRYGSITSIQAVYVPADDYTDPAPATVFSHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L+R L E+G YP +DPL S SR L       +       +  ++ R+ E  DI  I  
Sbjct: 320 TALSRKLTEDGIYPAIDPLGSTSRALTPSVVGQEHYDTAREVQRMLQRYHELLDIIAI-- 377

Query: 395 YRPGVDLILDK---AVHQVPIIYDFLKQS 420
              G+D + D     VH+   I +FL Q+
Sbjct: 378 --LGMDELSDDDKLVVHRARRIQNFLSQN 404


>gi|85858477|ref|YP_460679.1| F0F1 ATP synthase subunit beta [Syntrophus aciditrophicus SB]
 gi|118573766|sp|Q2LR05|ATPB_SYNAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|85721568|gb|ABC76511.1| ATP synthase beta chain [Syntrophus aciditrophicus SB]
          Length = 469

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 164/305 (53%), Gaps = 10/305 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GR++N +GKP+DG   + +   +M I  + P  + +       +TG++VID+ 
Sbjct: 84  PVGKECLGRILNVVGKPVDGLGPI-EAKNTMPIHREAPSFLEQDTSVHVLETGVKVIDLL 142

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G GK+ ++     +       IS+   VGER RE  +   + L  
Sbjct: 143 VPFPRGGKMGLFGGAGCGKTVVMMEMIHNIAMHHGGISVFAGVGERTREGNDLYREMLES 202

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             +K++ ++     E P  R    LTA+  AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 203 GVIKQAALIYGQMTEPPGARARVSLTALAAAEYFRDVEGQDVLLFVDNIFRFTQAGSEVS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ ++L  L ERI  +  +KG+ITAV  V V  D+  DP   +  +
Sbjct: 263 ALLGRMPSAVGYQPTLATDLGELQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFA 320

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LDG +VL+R +AE G YP VDPL S SR+ D     +E  K+  ++   + ++++ +DI
Sbjct: 321 HLDGTVVLSRPIAELGIYPAVDPLDSTSRILDPIVLGEEHYKVARAVQVTLQKYKDLQDI 380

Query: 390 RLIGG 394
             I G
Sbjct: 381 IAILG 385


>gi|222053555|ref|YP_002535917.1| ATP synthase F1, beta subunit [Geobacter sp. FRC-32]
 gi|254808152|sp|B9LZ84|ATPB_GEOSF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|221562844|gb|ACM18816.1| ATP synthase F1, beta subunit [Geobacter sp. FRC-32]
          Length = 470

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 167/303 (55%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR++N +G+P+D    +G    D    I  + P  +++    + F TGI+V+D+  P  
Sbjct: 92  LGRILNVIGEPVD---EMGPVNADKEYGIHREAPEFVDQSTKVEAFTTGIKVVDLLAPYA 148

Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213
            G +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  + ++E      
Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGV 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           L K+ +V    +E P  R    L+A++IAEYF   +G NVLL +D+I RF  +  E++  
Sbjct: 207 LDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFIDNIFRFTQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  DP   +  + L
Sbjct: 267 LGRIPSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+R +AE G YP VDPL S SR+ D     +E   ++  + +++ ++++ +DI  
Sbjct: 325 DATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQVQYVLQKYKDLQDIIA 384

Query: 392 IGG 394
           I G
Sbjct: 385 ILG 387


>gi|83716757|ref|YP_438619.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264]
 gi|257141683|ref|ZP_05589945.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264]
 gi|123754000|sp|Q2T880|ATPB2_BURTA RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|83650582|gb|ABC34646.1| ATP synthase F1, beta subunit [Burkholderia thailandensis E264]
          Length = 512

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G+P D   +L        I    PP   ++     F TGI+
Sbjct: 97  GPIRVPVGDAVLGRLLSVTGEPGDDGAALAADVARRPIHRGAPPLAEQKSATALFATGIK 156

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 157 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 214

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 215 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 274

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 275 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 332

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 333 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 392

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 393 YRELQDV 399


>gi|160902211|ref|YP_001567792.1| F0F1 ATP synthase subunit beta [Petrotoga mobilis SJ95]
 gi|190358699|sp|A9BFX3|ATPB_PETMO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160359855|gb|ABX31469.1| ATP synthase F1, beta subunit [Petrotoga mobilis SJ95]
          Length = 467

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 166/303 (54%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR++N LGKPID      KGD+  E    + + PP++N Q    +  +TGI+ ID+  P
Sbjct: 89  LGRMVNLLGKPIDE-----KGDVEGEEYWPIHRDPPSLNEQDTSIEILETGIKCIDLLAP 143

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG F G+G+GK+ L+    R+   +   IS+   VGER RE  + ++E      
Sbjct: 144 FPRGGKIGFFGGAGVGKTVLVMELIRNIAKEHQGISVFAGVGERTREGNDLWLEMQETGV 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272
           +  + +V    +E P  R   PLTA+TI+EYF  +   +VLL +D+I RF  +  E++  
Sbjct: 204 IDSTALVFGQMNEPPGARFRVPLTALTISEYFRDRQKKDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ S++ +L ERI  +  + G+IT+V ++ V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLASDMGQLQERI--TSTKDGSITSVQAIYVPADDFTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D +I L+R  +E G YP VDPL S S++ D      D   +   +  ++ R+E+ +DI  
Sbjct: 322 DANINLSRRQSELGLYPAVDPLDSTSKMLDPNVVGQDHYSVAREVKEVLQRYEDLQDIIA 381

Query: 392 IGG 394
           I G
Sbjct: 382 ILG 384


>gi|305432648|ref|ZP_07401809.1| ATP synthase F1 sector beta subunit [Campylobacter coli JV20]
 gi|304444359|gb|EFM37011.1| ATP synthase F1 sector beta subunit [Campylobacter coli JV20]
          Length = 465

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N  G  ID  + +   D    I  + PPA   Q  +   F+TGI+V+D+  P   
Sbjct: 87  LGRIFNVTGDLIDEGEEVAF-DKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K
Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
             +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G 
Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD  
Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VLNRS+AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 323 TVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|319780917|ref|YP_004140393.1| ATP synthase F1 subunit beta [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166805|gb|ADV10343.1| ATP synthase F1, beta subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 477

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 161/308 (52%), Gaps = 19/308 (6%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
             GR+IN +G+P+D +  +    + M  + +  P    Q  E     TGI+V+D+  P  
Sbjct: 89  MLGRIINVIGEPVDEEGPVDA--IEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPYA 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+       A++     V    VGER RE      EFIE  + 
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAG-VGERTREGNDLYHEFIESGVN 205

Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
              G    K+ +V    +E P  R    LT +T+AEYF  +G +VL  +D+I RF  +  
Sbjct: 206 KKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 265

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +
Sbjct: 266 EVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPAT 323

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD    LNR++AE+G YP VDPL S SR+ D     DE   V+  +  ++ R++  
Sbjct: 324 SFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPLVVGDEHYGVARQVQSILQRYKSL 383

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 384 QDIIAILG 391


>gi|291333876|gb|ADD93557.1| F0F1 ATP synthase subunit beta [uncultured marine bacterium
           MedDCM-OCT-S04-C293]
          Length = 459

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 164/313 (52%), Gaps = 16/313 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQ-RVEKGFK 146
           G  ++       GR++N LG+PIDG     KGD+  E    + + PP+   Q    +  +
Sbjct: 72  GAVKVPVGEKTLGRILNVLGEPIDG-----KGDVGAEEQMPIHRAPPSYEDQAESSEILE 126

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVR 203
           TGI+VID+  P   G ++G+F G+G+GK+  +    R+  ++     + + VGER RE  
Sbjct: 127 TGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAYETSGYSVFAGVGERTREGN 186

Query: 204 EF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           +F +E      L K  +V    +E P  R    L+ +TIAE F  +G +VLL +D+I R+
Sbjct: 187 DFYLEMTESQVLDKVALVYGQMNEPPGCRMRVALSGLTIAEKFRDEGKDVLLFVDNIYRY 246

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E ++  G +P A GY  ++  E+  L ERI  +  + G+IT+V ++ V  D+  D
Sbjct: 247 TLAGVECSSLLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAIYVPADDLTD 304

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD  +VL+R +A  G YP VDPL S SR  D A    E   +   +  ++ 
Sbjct: 305 PSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPAIVGQEHYDVAKGVQQVLQ 364

Query: 382 RFEETRDIRLIGG 394
           R+ E +DI  I G
Sbjct: 365 RYLELKDIIAILG 377


>gi|299537992|ref|ZP_07051278.1| F0F1 ATP synthase subunit beta [Lysinibacillus fusiformis ZC1]
 gi|298726574|gb|EFI67163.1| F0F1 ATP synthase subunit beta [Lysinibacillus fusiformis ZC1]
          Length = 471

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 159/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID  + +        I  + P   N     +  +TGI+V+D+  P   G
Sbjct: 90  LGRVFNVLGEVIDLGEEIPADARRDSIHREAPTFENLSTTVEILETGIKVVDLLAPYIKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +K++
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 270 PSAVGYQPTLATEMGKLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L+E G YP VDPLAS SR L+ +   A+   + + +   I R+ E +DI  I G
Sbjct: 328 NLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAIATGVQRTIQRYRELQDIIAILG 386


>gi|161723286|ref|NP_757448.2| F0F1 ATP synthase subunit beta [Mycoplasma penetrans HF-2]
          Length = 489

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 165/303 (54%), Gaps = 11/303 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
           +   GR+ N +G+PID      K + S   + K PP+ + Q  +   F+TGI+VID+  P
Sbjct: 90  SAVLGRMFNVVGEPIDNKPMPEKVEYSP--IHKKPPSFDEQSTKTEIFETGIKVIDLLVP 147

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-GDN 213
              G +IG+F G+G+GK+ L+     +         I + VGER RE  +   + + G  
Sbjct: 148 YVKGGKIGLFGGAGVGKTVLVQELIHNIATGHGGLSIFAGVGERTREGNDLYHEMIDGGV 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           + ++ +V    +E P  R    LTA+T+AE+F  +   +VLL +D+I RF+ +  E++  
Sbjct: 208 INQTALVFGQMNEPPGARMRVALTALTMAEHFRENNKQDVLLFIDNIFRFSQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + L
Sbjct: 268 LGRIPSAVGYQPTLAFEMGQLQERI--TSTKSGSITSVQAVYVPADDLTDPAPSTTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R +A  G YP ++PL S SR+ D +    E  K+  S+  ++ +FEE +DI  
Sbjct: 326 DAKTVLDRKIASLGIYPAINPLESSSRMLDPSIVGIEHYKVARSVQTILQKFEELQDIIA 385

Query: 392 IGG 394
           I G
Sbjct: 386 ILG 388


>gi|71893408|ref|YP_278854.1| F0F1 ATP synthase subunit beta [Mycoplasma hyopneumoniae J]
 gi|118573700|sp|Q4AAV7|ATPB_MYCHJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71851535|gb|AAZ44143.1| ATP synthase beta chain [Mycoplasma hyopneumoniae J]
          Length = 471

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+PIDG   L    +   I +K P  + ++   +   TGI+VID+  P   G +
Sbjct: 91  RMFNVLGQPIDGGKPL-DSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+ +
Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P 
Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ +E+ +L ERI  +   +G+IT+V +V V  D+  DP   +  S LD   VL
Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPLAS SR  +      +  LV+  +  ++ RF+E +DI  I G
Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384


>gi|323342943|ref|ZP_08083174.1| ATP synthase F1 sector beta subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322463007|gb|EFY08202.1| ATP synthase F1 sector beta subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 465

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 163/299 (54%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID      +G    EI  + PP  ++Q      +TGI+VID+  P   G
Sbjct: 84  LGRMFNVLGEPIDEQAFSTEGVEMHEIHREAPPFKDQQTTNTVLETGIKVIDLLCPYPQG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     +++ VGER RE  +   +      L+ +
Sbjct: 144 GKIGLFGGAGVGKTVLMQELIHNIAIEHSGLSVVAGVGERTREGNDLYHEMKDAKVLENT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +ESP  R    L+A+T+AE F  +   +VLL +D+I RF  +  E++   G +
Sbjct: 204 VLVYGQMNESPGARMRVALSALTMAENFRDQNKQDVLLFIDNIFRFTQAGSEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  + G+IT++ ++ V  D+  DP A    + LD   
Sbjct: 264 PSAVGYQPTLATEMGQLQERI--TSTKSGSITSIQAIYVPADDLTDPAAAITFTHLDAKT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S S  L++    A+   + + +  ++ R+++ +DI  I G
Sbjct: 322 VLDRNIAALGIYPAVDPLESSSNLLSEDVVGAEHVYVATEVQKILQRYKDLQDIIAILG 380


>gi|218135369|ref|ZP_03464173.1| hypothetical protein BACPEC_03274 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990754|gb|EEC56765.1| hypothetical protein BACPEC_03274 [Bacteroides pectinophilus ATCC
           43243]
          Length = 464

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID +    + D  + I  + P    +    +  +TGI+VID+  P   G 
Sbjct: 90  GRMFNVLGEPID-NKPEPQTDTYLPIHRQAPSFEEQSTQAEVLETGIKVIDLLCPYQKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      L K+ 
Sbjct: 149 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYGEMKESGVLSKTT 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF  +G  +VLL +D+I RF  +  E++   G +P
Sbjct: 209 MVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 269 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+ E G YP VDPL S SR+ D K    +  K+   +  ++ +++E +DI  I G
Sbjct: 327 LSRSIVELGIYPAVDPLESTSRMLDPKVVGEEHYKVARQVQEILQKYKELQDIIAILG 384


>gi|163789448|ref|ZP_02183887.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. AT7]
 gi|159875302|gb|EDP69367.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. AT7]
          Length = 468

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID  +   +    + I    P            +TGI+VID+  P   G
Sbjct: 89  LGRMFNVLGETIDQKEPFPEDAKRLPIHRNAPTFDELSSNTAILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +K++
Sbjct: 149 GKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMQESGVIKRT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDEVGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +V + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTSKGSITSIQAIYVPADDYTDPAPATVFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  L+ +    +  K+ + +  L+ R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASTSSALSPEIVGEEHYKVATEVQQLLQRYRELQDIIAILG 385


>gi|72080395|ref|YP_287453.1| F0F1 ATP synthase subunit beta [Mycoplasma hyopneumoniae 7448]
 gi|118573699|sp|Q4A8V9|ATPB_MYCH7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71913519|gb|AAZ53430.1| ATP synthase beta chain [Mycoplasma hyopneumoniae 7448]
          Length = 471

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+PIDG   L    +   I +K P  + ++   +   TGI+VID+  P   G +
Sbjct: 91  RMFNVLGQPIDGGKPL-DSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+ +
Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P 
Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ +E+ +L ERI  +   +G+IT+V +V V  D+  DP   +  S LD   VL
Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPLAS SR  +      +  LV+  +  ++ RF+E +DI  I G
Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384


>gi|13473456|ref|NP_105023.1| F0F1 ATP synthase subunit beta [Mesorhizobium loti MAFF303099]
 gi|81855462|sp|Q98EV8|ATPB_RHILO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|14024205|dbj|BAB50809.1| ATP synthase beta subunit [Mesorhizobium loti MAFF303099]
          Length = 477

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 161/308 (52%), Gaps = 19/308 (6%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
             GR+IN +G+P+D +  +    + M  + +  P    Q  E     TGI+V+D+  P  
Sbjct: 89  MLGRIINVIGEPVDEEGPVDA--IEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPYA 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+       A++     V    VGER RE      EFIE  + 
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAG-VGERTREGNDLYHEFIESGVN 205

Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
              G    K+ +V    +E P  R    LT +T+AEYF  +G +VL  +D+I RF  +  
Sbjct: 206 KKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 265

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +
Sbjct: 266 EVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPAT 323

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD    LNR++AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  
Sbjct: 324 SFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYAVARQVQSILQRYKSL 383

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 384 QDIIAILG 391


>gi|312601020|gb|ADQ90275.1| ATP synthase subunit beta [Mycoplasma hyopneumoniae 168]
          Length = 471

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+PIDG   L    +   I +K P  + ++   +   TGI+VID+  P   G +
Sbjct: 91  RMFNVLGQPIDGGKPL-DSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+ +
Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P 
Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ +E+ +L ERI  +   +G+IT+V +V V  D+  DP   +  S LD   VL
Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPLAS SR  +      +  LV+  +  ++ RF+E +DI  I G
Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384


>gi|110004066|emb|CAK98405.1| atp synthase beta chain protein [Spiroplasma citri]
          Length = 465

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 172/328 (52%), Gaps = 16/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID +    K  L   I  + P    +Q      +TGI+V+D+  P   G
Sbjct: 86  LGRMFNVLGEAID-EKPQPKTKLMRPIHREAPSYEEQQTTAAILETGIKVVDLLVPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      + K+
Sbjct: 145 GKIGLFGGAGVGKTVLVQELINNVAKAHGGISVFAGVGERTREGNDLYYEMIEAGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E+P  R    LT +TIAEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNETPGARMRVALTGLTIAEYFRDDKNQDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +
Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKKGSITSIQAVYVPSDDLTDPAPATTFAHLDAKV 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R +A  G YP VDPL S SRL D     +E  ++   +  ++ +F+E + I  I   
Sbjct: 323 VLDREIAALGIYPAVDPLGSSSRLLDPLVVGEEHYEVARGVQEILQKFKELQSIIAI--- 379

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420
             G+D + D+   AV +   I +FL QS
Sbjct: 380 -LGMDELSDEDKLAVARARKIRNFLSQS 406


>gi|15896119|ref|NP_349468.1| F0F1 ATP synthase subunit beta [Clostridium acetobutylicum ATCC
           824]
 gi|20137589|sp|Q9Z687|ATPB_CLOAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|15025911|gb|AAK80808.1|AE007784_5 FoF1-type ATP synthase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|4323568|gb|AAD16426.1| ATP synthase subunit beta [Clostridium acetobutylicum ATCC 824]
 gi|325510273|gb|ADZ21909.1| F0F1 ATP synthase subunit beta [Clostridium acetobutylicum EA 2018]
          Length = 466

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+ N LG+ ID       GD++ +    + +  P    Q V+ + F+TGI+VID+  P
Sbjct: 88  LGRLFNVLGQTIDE-----AGDMNADKYYPIHRPAPTFEEQSVQPEMFETGIKVIDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      
Sbjct: 143 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKDSGV 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K+ +V    +E P  R    LT +T+AEYF  KG +VLL +D+I RF  +  E++   
Sbjct: 203 INKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALL 262

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD
Sbjct: 263 GRIPSAVGYQPTLANEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFTHLD 320

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+R ++  G YP V PL S SR+ D     +E  ++ + + H++ R++E +DI  I
Sbjct: 321 ATTVLSREISNLGIYPAVSPLESTSRILDPRIVGEEHYEVANKVKHILERYQELQDIIAI 380

Query: 393 GG 394
            G
Sbjct: 381 LG 382


>gi|290580103|ref|YP_003484495.1| FoF1 membrane-bound proton-translocating ATPase subunit beta
           [Streptococcus mutans NN2025]
 gi|4239652|gb|AAD13383.1| ATPase, beta subunit [Streptococcus mutans]
 gi|254997002|dbj|BAH87603.1| FoF1 membrane-bound proton-translocating ATPase beta subunit
           [Streptococcus mutans NN2025]
          Length = 468

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 9/315 (2%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           VF  GR    P      GRV N LG  ID D    +      I  K P   +     +  
Sbjct: 73  VFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDDLSTSTEIL 132

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202
           +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE 
Sbjct: 133 ETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREG 192

Query: 203 RE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I 
Sbjct: 193 NDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIF 252

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++
Sbjct: 253 RFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDY 310

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379
            DP   +  + LD    L R L + G YP VDPLAS SR L+ +    +   + + + H+
Sbjct: 311 TDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLASSSRALSPEIVGQEHYDVATEVQHV 370

Query: 380 IHRFEETRDIRLIGG 394
           + R+ E +DI  I G
Sbjct: 371 LQRYRELQDIIAILG 385


>gi|24379917|ref|NP_721872.1| F0F1 ATP synthase subunit beta [Streptococcus mutans UA159]
 gi|26006949|sp|P95789|ATPB_STRMU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|24377897|gb|AAN59178.1|AE014985_2 FoF1 membrane-bound proton-translocating ATPase, beta subunit
           [Streptococcus mutans UA159]
          Length = 468

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 9/315 (2%)

Query: 87  VFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           VF  GR    P      GRV N LG  ID D    +      I  K P   +     +  
Sbjct: 73  VFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDDLSTSTEIL 132

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202
           +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE 
Sbjct: 133 ETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREG 192

Query: 203 RE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I 
Sbjct: 193 NDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIF 252

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++
Sbjct: 253 RFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDY 310

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379
            DP   +  + LD    L R L + G YP VDPLAS SR L+ +    +   + + + H+
Sbjct: 311 TDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLASSSRALSPEIVGQEHYDVATEVQHV 370

Query: 380 IHRFEETRDIRLIGG 394
           + R+ E +DI  I G
Sbjct: 371 LQRYRELQDIIAILG 385


>gi|268679156|ref|YP_003303587.1| ATP synthase F1 subunit beta [Sulfurospirillum deleyianum DSM 6946]
 gi|268617187|gb|ACZ11552.1| ATP synthase F1, beta subunit [Sulfurospirillum deleyianum DSM
           6946]
          Length = 465

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N +G  ID G+   GK   S+    + PP    Q  +   F+TGI+V+D+  P  
Sbjct: 87  LGRIFNVVGDVIDQGEPVAGKTKWSIH---REPPKFEEQSTKSEIFETGIKVVDLLAPYA 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L 
Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKDSNVLD 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K  +      E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G
Sbjct: 204 KVALCYGQMSEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD 
Sbjct: 264 RIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VLNRS+AE+G YP VDPL S SR+ + +   A+   +   +  ++ ++++ +DI  I 
Sbjct: 322 TTVLNRSIAEKGIYPAVDPLDSSSRMLNPEILGAEHYNVSRGVQAVLQKYKDLQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|167615114|ref|ZP_02383749.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis Bt4]
          Length = 428

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G+P D   +L        I    PP   ++     F TGI+
Sbjct: 13  GPIRVPVGDAVLGRLLSVTGEPGDDGAALAADVARRPIHRGAPPLAEQKSATALFATGIK 72

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 73  VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 130

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 131 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 190

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 191 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 248

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 249 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 308

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 309 YRELQDV 315


>gi|309775243|ref|ZP_07670253.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916995|gb|EFP62725.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 466

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 164/308 (53%), Gaps = 9/308 (2%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR+ N LG+ IDG   +G  D ++ I  + P    +Q   +  +TGI+VI
Sbjct: 79  IRVPVGKEILGRMFNVLGREIDGLGPVGT-DNTLPIHRQAPGFEEQQTSAEMLETGIKVI 137

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +   +     +++ VGER RE  +   + 
Sbjct: 138 DLLCPYSKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVVTGVGERTREGNDMYHEM 197

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267
                L K+V+V    +ESP  R    LT +T+AEYF      +VLL +D+I RF  +  
Sbjct: 198 KDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEYFRDHDHQDVLLFIDNIFRFTQAGS 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +A  G YP VDPL S SR+ D     +E  ++   +  ++ R++E 
Sbjct: 316 AFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQTILQRYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 QDIIAILG 383


>gi|320546479|ref|ZP_08040794.1| ATP synthase F1 sector beta subunit [Streptococcus equinus ATCC
           9812]
 gi|320448864|gb|EFW89592.1| ATP synthase F1 sector beta subunit [Streptococcus equinus ATCC
           9812]
          Length = 468

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 167/316 (52%), Gaps = 11/316 (3%)

Query: 87  VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144
           VF  GR   +       GRV N LG  ID D+   + D   E + K  PA +        
Sbjct: 73  VFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPRESIHKKAPAFDELSTSSEI 131

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE
Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I
Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D+
Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L R L + G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ E +DI  I G
Sbjct: 370 VLQRYRELQDIIAILG 385


>gi|288904998|ref|YP_003430220.1| F0F1 ATP synthase beta chain [Streptococcus gallolyticus UCN34]
 gi|306831069|ref|ZP_07464230.1| ATP synthase F1 sector beta subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977965|ref|YP_004287681.1| F0F1 ATP synthase subunit beta [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731724|emb|CBI13285.1| F0F1 ATP synthase beta chain [Streptococcus gallolyticus UCN34]
 gi|304426635|gb|EFM29746.1| ATP synthase F1 sector beta subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177893|emb|CBZ47937.1| F0F1 ATP synthase subunit beta [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 468

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 167/316 (52%), Gaps = 11/316 (3%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144
           VF  GR    P      GRV N LG  ID D+   + D   E + K  PA +        
Sbjct: 73  VFDTGRAISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPREPIHKKAPAFDELSTSSEI 131

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE
Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I
Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D+
Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L R L + G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ E +DI  I G
Sbjct: 370 VLQRYRELQDIIAILG 385


>gi|322379226|ref|ZP_08053617.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS1]
 gi|322379701|ref|ZP_08054014.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS5]
 gi|321147850|gb|EFX42437.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS5]
 gi|321148366|gb|EFX42875.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS1]
          Length = 474

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID  + L K  +   I    P    +    + F+TGI+VID+  P   G
Sbjct: 87  LGRIFNVVGDVIDNQEPL-KEPIKWPIHRAAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  + + E   G  L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKEGGVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R     T +T+AEYF   KG ++L+ +D+I R+A S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIVFTGLTMAEYFRDEKGLDILMFIDNIFRYAQSGAEMSALLGRV 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +L ERI  +  + G+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR +AE+G YP VDPL S SR+ D     +E  ++ +    ++ ++++ +DI  I G
Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDAQVIGNEHYRIATGTQQILQKYKDLQDIIAILG 382


>gi|329121453|ref|ZP_08250077.1| ATP synthase F1 sector beta subunit [Dialister micraerophilus DSM
           19965]
 gi|327469368|gb|EGF14838.1| ATP synthase F1 sector beta subunit [Dialister micraerophilus DSM
           19965]
          Length = 477

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 9/311 (2%)

Query: 91  GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           GR    P    C GR+ N LG+ +D      K      I    P   ++    + F+TGI
Sbjct: 84  GRAIAVPVGDGCLGRIFNVLGQTVDNGTEEVKASDYWPIHRVAPAFKDQAPAAEIFETGI 143

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206
           +V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGER RE  +  
Sbjct: 144 KVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCSVFCGVGERTREGNDLW 203

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
            +      L K+ +V    +E P  R    LT +T++EYF  K G +VLL +D+I RF  
Sbjct: 204 GEMKESGVLSKAALVYGQMNEPPGARMRVALTGLTMSEYFRDKQGQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSITSVQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
              V + LD   VLNRS+AE G YP VDPL S SR+ D     +E  ++   +  ++ R+
Sbjct: 322 PAGVFTHLDATTVLNRSIAELGIYPAVDPLDSTSRILDPNTLGEEHYEVARGVQAILQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|258517234|ref|YP_003193456.1| F0F1 ATP synthase subunit beta [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780939|gb|ACV64833.1| ATP synthase F1, beta subunit [Desulfotomaculum acetoxidans DSM
           771]
          Length = 474

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++  LG+PIDG   +   D  + I    P  +++    +  +TGI+VID+ TP   G
Sbjct: 94  LGRMMGVLGQPIDGKGPI-VSDEYLPIHRPAPKLVDQSTRAEMLETGIKVIDLMTPFLKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ ++     +       IS+   VGER RE  +   + L    L K+
Sbjct: 153 GKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFSGVGERTREGNDLYHEMLESGVLDKT 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++V    +E P  R    LT +T+AE F  ++G +VLL +D+I RF  +  E++   G +
Sbjct: 213 ILVFGQMNEPPGARLRVGLTGLTMAECFRDNEGADVLLFVDNIFRFTQAGSEVSALLGRM 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG++T+V ++ V  D+  DP   +  + LD  +
Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTTKGSVTSVQAIYVPADDLTDPAPANAFAHLDATV 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     A+       +  ++ R++E +DI  I G
Sbjct: 331 VLSRQIAELGIYPAVDPLDSTSRILDPNVLGAEHYNCSRGVQAVLQRYKELQDIIAILG 389


>gi|315639292|ref|ZP_07894454.1| ATP synthase F1 sector beta subunit [Campylobacter upsaliensis
           JV21]
 gi|315480618|gb|EFU71260.1| ATP synthase F1 sector beta subunit [Campylobacter upsaliensis
           JV21]
          Length = 465

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 168/317 (52%), Gaps = 27/317 (8%)

Query: 103 GRVINALGKPID---GDDSLGK-----GDLSME----------IMSKVPPAMNRQRVEKG 144
           G  + ALG PI    G+  LG+     GDL  E           + + PPA   Q  +  
Sbjct: 68  GLKVEALGSPISVPVGEKVLGRIFNVTGDLIDEGEEISFDKHWSIHRDPPAFEEQSTKSE 127

Query: 145 -FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200
            F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + VGER R
Sbjct: 128 IFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTR 187

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
           E  +   +    N L K  +     +E P  R    LT +T+AEYF  + G +VL+ +D+
Sbjct: 188 EGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDN 247

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D
Sbjct: 248 IFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPAD 305

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D     +E  K+   + 
Sbjct: 306 DLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQ 365

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ ++++ +DI  I G
Sbjct: 366 SVLQKYKDLQDIIAILG 382


>gi|313678541|ref|YP_004056281.1| ATP synthase F1 subunit beta [Mycoplasma bovis PG45]
 gi|312950454|gb|ADR25049.1| ATP synthase F1, beta subunit [Mycoplasma bovis PG45]
          Length = 487

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ + LG PID         + M I +  P    +    + F+TGI+VID+  P   G
Sbjct: 99  LGRMFDVLGNPIDLKPM--PDTIKMPIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + L    L+K+
Sbjct: 157 GKIGLFGGAGVGKTVLVQELINNIAREHGGLSVFAGVGERTREGNDLYNEMLASGVLEKT 216

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +
Sbjct: 217 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRM 276

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  + K  G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 277 PSAVGYQPTLATEMGQLQERIASTNK--GSITSVQAVYVPADDLTDPAPATTFNHLDAKT 334

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S SRL D      E  +    +  ++ RF+E +DI  I G
Sbjct: 335 VLDRNIAALGIYPAVDPLESSSRLLDPLVIGQEHYETARRVVSILQRFKELQDIIAILG 393


>gi|39995224|ref|NP_951175.1| F0F1 ATP synthase subunit beta [Geobacter sulfurreducens PCA]
 gi|81832140|sp|Q74GY0|ATPB_GEOSL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|39981986|gb|AAR33448.1| ATP synthase F1, beta subunit [Geobacter sulfurreducens PCA]
 gi|298504228|gb|ADI82951.1| ATP synthase F1, beta subunit [Geobacter sulfurreducens KN400]
          Length = 470

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 167/303 (55%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR++N +G+P+D    +G  +   E  I  + P  +++    + F TGI+V+D+  P  
Sbjct: 92  LGRILNVIGEPVD---EMGPVNAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYA 148

Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213
            G +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  + ++E      
Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGV 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           L K+ +V    +E P  R    L+A++IAEYF   +G NVLL +D+I RF  +  E++  
Sbjct: 207 LDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFVDNIFRFTQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  DP   +  + L
Sbjct: 267 LGRIPSAVGYQPTLATEMGELQERI--TSTTKGSITSVQAIYVPADDLTDPAPATAFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R +AE G YP VDPL S SR+ D     +E   +   + +++ ++++ +DI  
Sbjct: 325 DATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYSIARQVQYVLQKYKDLQDIIA 384

Query: 392 IGG 394
           I G
Sbjct: 385 ILG 387


>gi|317486591|ref|ZP_07945412.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
 gi|316922191|gb|EFV43456.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
          Length = 470

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 178/336 (52%), Gaps = 14/336 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLG--KGDL 124
           D+V    +   E +  G  V   G+  ++P  +   GR++N +G+P+D    +G  K + 
Sbjct: 56  DVVRTIAMDATEGLVRGMDVVDTGKPIMAPVGSASLGRIMNVVGRPVD---EMGPIKAEK 112

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I  + P  + +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +
Sbjct: 113 YLPIHREAPSFVEQNTSVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMINN 172

Query: 185 DCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
                  IS+   VGER RE  +   +      L+K+ +V    +E P  R    LTA+T
Sbjct: 173 IAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALT 232

Query: 241 IAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  
Sbjct: 233 CAEYFRDEENQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGSLQERI-- 290

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +   KG+IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR
Sbjct: 291 TSTNKGSITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSR 350

Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + D     +E   V+  +  ++ +++E +DI  I G
Sbjct: 351 ILDPNVVGEEHYGVARGVQQVLQKYKELQDIIAILG 386


>gi|78777600|ref|YP_393915.1| F0F1 ATP synthase subunit beta [Sulfurimonas denitrificans DSM
           1251]
 gi|118573775|sp|Q30QQ1|ATPB_SULDN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78498140|gb|ABB44680.1| ATP synthase F1, beta subunit [Sulfurimonas denitrificans DSM 1251]
          Length = 468

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N +G+ ID  + +   D  M  + + PPA+  Q    + F+TGI+V+D+  P   
Sbjct: 91  LGRIFNVIGETIDDGEQVT--DAPMWSIHRQPPALVEQSTTTEMFETGIKVVDLLAPYSK 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +       +S+   VGER RE  +   +    N L K
Sbjct: 149 GGKVGLFGGAGVGKTVIIMELIHNVAMGHDGLSVFAGVGERTREGNDLYHEMKDSNVLDK 208

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
             +      E P  R    LT +T+AEYF   KG +VL+ +D+I RFA S  E++   G 
Sbjct: 209 VALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFVDNIFRFAQSGSEMSALLGR 268

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L +RI  +  + G+IT+V +V V  D+  DP   SV + LD  
Sbjct: 269 IPSAVGYQPTLAREMGALQDRI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDAT 326

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            VLNR +AE+G YP VDPL S SRL D     +E   V+  +   + ++++ +DI  I G
Sbjct: 327 TVLNRKIAEKGIYPAVDPLDSSSRLLDPQILGEEHYNVARGVQQTLQKYKDLQDIIAILG 386


>gi|14715606|gb|AAK72443.1|AF283808_8 ATP synthase beta subunit [Clostridium pasteurianum]
          Length = 465

 Score =  152 bits (384), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/299 (36%), Positives = 162/299 (54%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GR+ N LGK ID    L K D    I  ++PP+   Q V  + F+TGI+VID+  P   
Sbjct: 87  LGRLFNVLGKTIDEAGDL-KDDEYYPI-HRLPPSFEEQSVVPEMFETGIKVIDLLAPYQK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      + K
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVIDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    LT +T+AE F  +G +VLL +D+I RF  +  E++   G +
Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEKFRDEGQDVLLFIDNIFRFTQAGSEVSALLGRI 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFTHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIRLIGG 394
           VL+RS++E G YP V PL S SR+ D     +E   V+S   LI  R+ E +DI  I G
Sbjct: 323 VLSRSISELGIYPAVSPLESSSRILDPNIVGEEHYQVASKVKLILERYNELQDIIAILG 381


>gi|268609605|ref|ZP_06143332.1| F0F1 ATP synthase subunit beta [Ruminococcus flavefaciens FD-1]
          Length = 463

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 169/323 (52%), Gaps = 10/323 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID    +G  D   EI  K P   ++  V +  +TGI+VID+  P   G 
Sbjct: 86  GRMFNVLGEPIDKQGDVGT-DERWEIHRKAPTFQDQSPVVEVLETGIKVIDLIAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      + K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWNEMQESGVIAKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   +  +VLL +D+I R+  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGSRMRVAQTGLTMAEYFRDCEHKDVLLFIDNIFRYVQAGSEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP      + LD   V
Sbjct: 265 SAVGYQPTLATEVGELQERI--TSTKNGSITSVQAVYVPADDLTDPAPAITFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGGYR 396
           L+R + E+G YP VDPL S SR+ +     +E   V+  T  L+ +++E +DI  I G  
Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEPEIVGEEHYNVARRTQELLQKYKELQDIIAILGME 382

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
             +D     AV++   I  FL Q
Sbjct: 383 E-LDEEDKLAVYRARKIQKFLSQ 404


>gi|158430153|pdb|2QE7|D Chain D, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430154|pdb|2QE7|E Chain E, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430155|pdb|2QE7|F Chain F, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|33329387|gb|AAQ10090.1| ATP synthase subunit beta [Bacillus sp. TA2.A1]
          Length = 462

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 17/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GRV N LG+PID      +G+++ E    I    P        ++  +TGI+VID+ 
Sbjct: 84  ATLGRVFNVLGEPIDE-----QGEVNAEERHPIHRPAPEFEELSTADEILETGIKVIDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +    
Sbjct: 139 APYAKGGKIGLFGGAGVGKTVLIQELINNVAQEHGGLSVFAGVGERTREGNDLYHEMKDS 198

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++
Sbjct: 199 GVISKTSMVFGQMNEPPGARLRVALTGLTMAEYFRDREGQDVLLFIDNIFRFTQAGSEVS 258

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ V  D++ DP   +  +
Sbjct: 259 ALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATTFA 316

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD    L R LAE G YP VDPLAS SR+   A   +E  ++   +  ++ R+ + +DI
Sbjct: 317 HLDATTNLERKLAEMGIYPAVDPLASTSRILSPAVVGEEHYRVARGVQQVLQRYNDLQDI 376

Query: 390 RLIGG 394
             I G
Sbjct: 377 IAILG 381


>gi|224372373|ref|YP_002606745.1| F0F1 ATP synthase subunit beta [Nautilia profundicola AmH]
 gi|254808159|sp|B9L7Y7|ATPB_NAUPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|223588441|gb|ACM92177.1| ATP synthase F1, beta subunit [Nautilia profundicola AmH]
          Length = 468

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N  G  IDG + +        I    PP   +    + F+TGI+V+D+  P   G 
Sbjct: 88  GRIFNVTGDVIDGGEEVPADTPRWSIHRDAPPFEEQSTKMEVFETGIKVVDLLCPYMKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ ++     +  +      + + VGER RE  +   +      L K  
Sbjct: 148 KTGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKVA 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +     +E P  R    +T +T+AEYF   +G +VL+ +D+I RFA +  E++   G +P
Sbjct: 208 LCYGQMNEPPGCRNRVAMTGLTMAEYFRDEEGRDVLMFIDNIFRFAQAGAEMSALLGRIP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D+  DP   SV + LD   V
Sbjct: 268 SAVGYQPTLATEMGKLQERI--TSTKKGSITSIQAVYVPADDLTDPAPASVFAHLDSTTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           LNR +AE+G YP VDPL S SR+ D     +E  ++   +  ++ ++++ +DI  I G
Sbjct: 326 LNRKIAEKGIYPAVDPLDSTSRILDPQIVGEEHYRVARGVQEVLQKYKDLQDIIAILG 383


>gi|310659420|ref|YP_003937141.1| f1 sector of membrane-bound ATP synthase subunit beta [Clostridium
           sticklandii DSM 519]
 gi|308826198|emb|CBH22236.1| F1 sector of membrane-bound ATP synthase, beta subunit [Clostridium
           sticklandii]
          Length = 465

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D  + +G G+  + I  + P   +++   +  +TGI+V+D+  P   G
Sbjct: 88  LGRIFNLLGEPVDNMEYVGTGN-RLPIHREAPAYEDQETSTEILETGIKVVDLIAPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +  E+      + K+
Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNIAKEHGGISVFTGVGERTREGNDLYEEMKESGVIDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 VLVYGQMNEPPGARMRVGLSGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S SR L+      +   +   +  ++ R++E +DI  I G
Sbjct: 325 VLSRNIASLGIYPAVDPLDSTSRILSADIVGKEHYDVARDVQSILQRYKELQDIIAILG 383


>gi|229542495|ref|ZP_04431555.1| ATP synthase F1, beta subunit [Bacillus coagulans 36D1]
 gi|229326915|gb|EEN92590.1| ATP synthase F1, beta subunit [Bacillus coagulans 36D1]
          Length = 473

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 163/302 (53%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+ ID D  L KG++  + + K  P+  +   + +  +TGI+V+D+  P 
Sbjct: 90  ATLGRVFNVLGEVIDLDGEL-KGNVRRDPIQKPAPSFEQLSTQVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNVAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 209 AKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L+E G YP VDPLAS SR L+ +    +   +   +   + R+ E +DI  I
Sbjct: 327 ATTNLERRLSEMGIYPAVDPLASTSRALSPEIVGEEHYNVARQVQQTLQRYRELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|42784475|ref|NP_981722.1| F0F1 ATP synthase subunit beta [Bacillus cereus ATCC 10987]
 gi|206976897|ref|ZP_03237799.1| ATP synthase F1, beta subunit [Bacillus cereus H3081.97]
 gi|217962793|ref|YP_002341371.1| F0F1 ATP synthase subunit beta [Bacillus cereus AH187]
 gi|222098776|ref|YP_002532834.1| f0f1 ATP synthase subunit beta [Bacillus cereus Q1]
 gi|229142046|ref|ZP_04270571.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST26]
 gi|81830903|sp|Q72XE8|ATPB_BACC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739979|sp|B7HY64|ATPB_BACC7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808131|sp|B9IRT7|ATPB_BACCQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|42740407|gb|AAS44330.1| ATP synthase F1, beta subunit [Bacillus cereus ATCC 10987]
 gi|206744863|gb|EDZ56268.1| ATP synthase F1, beta subunit [Bacillus cereus H3081.97]
 gi|217063479|gb|ACJ77729.1| ATP synthase F1, beta subunit [Bacillus cereus AH187]
 gi|221242835|gb|ACM15545.1| ATP synthase F1, beta subunit [Bacillus cereus Q1]
 gi|228641335|gb|EEK97641.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST26]
          Length = 468

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 87  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|1515180|emb|CAA90180.1| SepB [Escherichia coli]
          Length = 290

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 129/227 (56%), Gaps = 2/227 (0%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           S  L +VI I+ D V++ P      +  G  + + G  F+I       GR+I+ +G+P++
Sbjct: 64  SQRLAEVIAIDEDEVFLLPFEHVSGMCCGQWLSYQGDEFKIRVGDALLGRLIDGIGRPME 123

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +           + ++ P  + RQ +++ F  G+R ID       GQRIG+FAGSG+GK
Sbjct: 124 SNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234
           STLL M       D ++++L+GERGREV EF+       L K V+VV TSD   + R  A
Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             TA TIAEYF  +G NVLL++DS+TR+A + R++   SGE P  RG
Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGE-PDVRG 289


>gi|315649870|ref|ZP_07902952.1| ATP synthase F1, beta subunit [Paenibacillus vortex V453]
 gi|315274669|gb|EFU38051.1| ATP synthase F1, beta subunit [Paenibacillus vortex V453]
          Length = 466

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 164/307 (53%), Gaps = 19/307 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDI 154
           +   GRV N LG+PID       GD+  EI + +    PP        +  +TGI+VID+
Sbjct: 87  SATLGRVFNVLGEPIDN-----AGDVVSEINNPIHREAPPYDELSTQAEMLETGIKVIDL 141

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG 211
             P   G +IG+F G+G+GK+  +     +   +   IS+   VGER RE  +   + + 
Sbjct: 142 LAPYQKGGKIGLFGGAGVGKTVAIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MS 200

Query: 212 DN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           D+  + K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 201 DSGVINKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGKDVLLFIDNIFRFTQAGSE 260

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ SE+ RL ERI  +  +KG++T++ ++ V  D++ DP   + 
Sbjct: 261 VSALLGRMPSAVGYQPTLASEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATT 318

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD    L R ++E G YP VDPLAS SR LA +    +   +   +  ++ R+ E +
Sbjct: 319 FAHLDATTNLERKISEMGIYPAVDPLASSSRILAPEIVGEEHYNVAQGVKKILARYNELQ 378

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 379 DIIAILG 385


>gi|225378697|ref|ZP_03755918.1| hypothetical protein ROSEINA2194_04367 [Roseburia inulinivorans DSM
           16841]
 gi|225209534|gb|EEG91888.1| hypothetical protein ROSEINA2194_04367 [Roseburia inulinivorans DSM
           16841]
          Length = 463

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG PID  D    G  +  I  K P    +   ++  +TGI+V+D+  P   G 
Sbjct: 89  GRMFNVLGNPIDEIDPP-TGVETWPIHRKAPAFEEQATSQEMLETGIKVVDLLCPYQKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +   +     + + VGER RE  + + E      + K+ 
Sbjct: 148 KIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTREGNDLYYEMKESGVIDKTT 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I RF  +  E++   G +P
Sbjct: 208 MVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 268 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L RS+AE G YP VDPLAS SR+ D      E  ++   +  ++ +++E +DI  I G
Sbjct: 326 LERSIAELGIYPAVDPLASTSRILDPRIIGQEHFEVARGVQEILQKYKELQDIIAILG 383


>gi|91203664|emb|CAJ71317.1| strongly similar to ATPD gene encoding subunit beta of ATP synthase
           [Candidatus Kuenenia stuttgartiensis]
          Length = 454

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 163/304 (53%), Gaps = 11/304 (3%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151
            +I  S    GR  N  G+PIDG   +   D ++  + K PP +  Q    G  +TGI++
Sbjct: 75  LKIPVSKNCLGRAFNIFGEPIDGKPPVE--DHTLIPIHKPPPGLQEQIPASGILETGIKI 132

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIED 208
           ID+ +P   G +IG+F G+G+GK+ LL  F       +  + I   VGER RE  E   +
Sbjct: 133 IDLLSPFPKGGKIGLFGGAGVGKTVLLMEFIYKVVKVYSGISIFCGVGERMREGHELWRE 192

Query: 209 Y-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266
               D L  +++V     ESP +R   PLTA+T+AE+F  + G ++L ++D++ RF  + 
Sbjct: 193 MERQDILSNAILVFGQMCESPGIRFRVPLTAITLAEFFRDELGSDILFLMDNVYRFIQAG 252

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G L    GY  ++ SEL  + ERI     ++G+IT+V ++ V  D+  DP   
Sbjct: 253 NEVSVLLGRLSSRVGYQPTLLSELAEVEERI--VSTQRGSITSVQAIYVPADDITDPAVA 310

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +V   LD  +VL+R +A +G YP +DPL S S+L       +    +S S+T  + R+++
Sbjct: 311 NVFPHLDTTVVLSREIASKGLYPAIDPLLSTSKLLSPEDVGERHYQISRSVTEHLSRYKK 370

Query: 386 TRDI 389
             DI
Sbjct: 371 LLDI 374


>gi|1929513|gb|AAB51466.1| ATP synthase subunit beta [Moorella thermoacetica]
          Length = 462

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PID    +   +  + I    P    +Q   +  +TGI+V+D+  P  
Sbjct: 83  ATLGRLFNVLGEPIDNQGPVETTE-RLPIHRPAPSFEEQQPSTEVLETGIKVVDLLAPYA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+  ++     + S VGER RE  + ++E      L+
Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFSGVGERTREGNDLYLEMKESGVLE 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+ EYF   +  +VLL +D+I RF     E++    
Sbjct: 202 KTALVFGQMNEPPGARLRVGLTGLTMPEYFRDPEAQDVLLFIDNIFRFVQPGSEVSALLA 261

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 262 RMPSAVGYQPTLPTEMGPLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 319

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D +    +  ++V  +  ++ R++E +DI  I 
Sbjct: 320 TTVLSRQIAELGIYPAVDPLDSTSRILDPRVLGEEHYQVVRGVQQVLQRYKELQDIIAIL 379

Query: 394 G 394
           G
Sbjct: 380 G 380


>gi|84515110|ref|ZP_01002473.1| ATP synthase subunit B [Loktanella vestfoldensis SKA53]
 gi|84511269|gb|EAQ07723.1| ATP synthase subunit B [Loktanella vestfoldensis SKA53]
          Length = 474

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 168/310 (54%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G PID    +G+ +    I +  PP   +    +   TGI+VID+  P  
Sbjct: 84  ATLGRIMNVVGAPIDEKGPIGETE-RRSIHADAPPFEAQSTASEVLVTGIKVIDLLAPYA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      EFIE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGYSVFAGVGERTREGNDLYYEFIESGV 200

Query: 211 G--DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              D+L KS V  V    +E P  R    L+ +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 INIDDLTKSKVALVYGQMNEPPGARMRVALSGLTMAESFRDQSGSDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+V ++ V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKSGSITSVQAIYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VLNR+++E+G YP VDPL S SRL D A   +E  K+ + + +++ R++
Sbjct: 319 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGEEHYKVAADVQNMLQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|121999208|ref|YP_001003995.1| F0F1 ATP synthase subunit beta [Halorhodospira halophila SL1]
 gi|166201711|sp|A1WZT1|ATPB_HALHL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|121590613|gb|ABM63193.1| ATP synthase F1 subcomplex beta subunit [Halorhodospira halophila
           SL1]
          Length = 458

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D    + K D    I    P    +   ++  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGEPVDEAGEV-KTDERWSIHRNAPSYEEQSGGQELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  +G +VL+ +D+I R+  + +E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMFIDNIYRYTLAGQEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  IV
Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFAHLDATIV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQGVLQRYKELKDIIAILG 377


>gi|300087662|ref|YP_003758184.1| ATP synthase F1 subunit beta [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527395|gb|ADJ25863.1| ATP synthase F1, beta subunit [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 463

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D +  + K D    I  K PP   ++   +  +TGI+VID+ TP   G
Sbjct: 85  LGRIFNVLGEPLDNEGEV-KTDERWPIHRKAPPFEEQETSAQMLETGIKVIDLITPFARG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG + G+G+GK+ ++    R+   +     + + VGER RE  +   +      + K+
Sbjct: 144 GKIGAYGGAGVGKTVVIQELIRNIATEHGGFSVFAGVGERSREGNDLWNEMKDSGVIDKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P +R    LT +T+AEYF  +   +VLL +D+I R+  +  E++   G +
Sbjct: 204 ALVFGQMNELPAVRLRIALTGLTMAEYFRDQEHRDVLLFIDNIYRYTLAGVEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  + G+IT+  ++ V  D++ DP   +    LD  I
Sbjct: 264 PSAVGYQPTLATEMGQLQERI--TSTKNGSITSFQAIYVPADDYTDPGVVATFGHLDAVI 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            L RSLA +  +P VDPLAS SR+ D A   +E   V+  +  ++ R+++ +D+  I G
Sbjct: 322 ALERSLAAQALFPAVDPLASNSRILDPAVVGEEHYNVAREVQRVLQRYKDLQDVIAILG 380


>gi|167463135|ref|ZP_02328224.1| F0F1 ATP synthase subunit beta [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322383102|ref|ZP_08056929.1| F0F1 ATP synthase subunit beta-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321152764|gb|EFX45390.1| F0F1 ATP synthase subunit beta-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 468

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 166/308 (53%), Gaps = 15/308 (4%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           + PS    GRV N LG+PIDGD   G+ D  L+  I    P   +     +  +TGI+V+
Sbjct: 87  VGPSTL--GRVYNVLGEPIDGD---GEADRTLTSPIHKPAPEYSDLTTQAEMLETGIKVV 141

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+  +     +   +   IS+   VGER RE  +   + 
Sbjct: 142 DLLAPYMKGGKIGLFGGAGVGKTVTMQELIHNIAQEHGGISVFAGVGERTREGNDLYHEM 201

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                + K+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  
Sbjct: 202 KDSGVIAKTAMVFGQMNEPPGARLRVALSGLTMAEYFRDEEGRDVLLFIDNIFRFTQAGS 261

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +
Sbjct: 262 EVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPAT 319

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD    L RS+A +G +P VDPLAS SR+       +E  ++   +  ++ R++E 
Sbjct: 320 AFAHLDATTNLERSIAAKGIFPAVDPLASTSRILTPQIVGEEHYEVAQGVKEILQRYKEL 379

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 380 QDIIAILG 387


>gi|126736547|ref|ZP_01752287.1| ATP synthase F1, beta subunit [Roseobacter sp. CCS2]
 gi|126713860|gb|EBA10731.1| ATP synthase F1, beta subunit [Roseobacter sp. CCS2]
          Length = 474

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 168/310 (54%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G P+D    +G+ D    I ++ PP   +    +   TGI+VID+  P  
Sbjct: 84  ATLGRIMNVVGDPVDEKGPIGEKD-RRSIHAEAPPFEAQSTASEVLVTGIKVIDLLAPYA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      EFIE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGYSVFAGVGERTREGNDLYYEFIESGV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              ++L KS V  V    +E P  R    L+ +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 IDAEDLTKSKVALVYGQMNEPPGARMRVALSGLTMAESFRDQSGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+V ++ V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKNGSITSVQAIYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            +  + LD   VLNR+++E+G YP VDPL S SRL D A   +E   V++ +  ++ R++
Sbjct: 319 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGEEHYAVAADVQQMLQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|257125432|ref|YP_003163546.1| F0F1 ATP synthase subunit beta [Leptotrichia buccalis C-1013-b]
 gi|257049371|gb|ACV38555.1| ATP synthase F1, beta subunit [Leptotrichia buccalis C-1013-b]
          Length = 465

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 161/302 (53%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+ +D  + L + D+  E + K  P+  +Q  +    +TGI+V+D+  P 
Sbjct: 83  ATLGRIFNVLGEAVDEGEKLDE-DVLRESIHKDAPSFEQQGTDSEILETGIKVVDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+   +      +
Sbjct: 142 LKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMTESGVI 201

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LTA+T+AEYF  K G NVLL +D+I RF  +  E++   
Sbjct: 202 DKTALVYGQMNEPPGARLRVGLTALTMAEYFRDKEGQNVLLFIDNIFRFTQAGSEVSALL 261

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD
Sbjct: 262 GRMPSAVGYQPNLATEMGALQERI--TSTNTGSITSVQAVYVPADDLTDPAPATTFAHLD 319

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+R +A  G YP VDPL S SR+ +     +E  K+      ++ R++E +DI  I
Sbjct: 320 ATTVLSRQIASLGIYPAVDPLDSTSRILEPEIVGNEHYKIARETQKVLQRYKELQDIIAI 379

Query: 393 GG 394
            G
Sbjct: 380 LG 381


>gi|317495894|ref|ZP_07954257.1| ATP synthase F1 [Gemella moribillum M424]
 gi|316914071|gb|EFV35554.1| ATP synthase F1 [Gemella moribillum M424]
          Length = 471

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ +D  +  G  ++  E + K  P         +  +TGI+VID+  P   
Sbjct: 90  LGRVFNVLGEAVDHGEEAG-AEVQKESIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIK 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      + K
Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINK 208

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 209 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 268

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 269 MPSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 326

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R+L E G YP VDPLAS SR LA +    +  K+ +++   + ++ E +DI  I G
Sbjct: 327 TNLERALTEMGIYPAVDPLASTSRALAPEIVGEEHYKVATTIQRTLQKYRELQDIIAILG 386


>gi|294501860|ref|YP_003565560.1| ATP synthase F1 subunit beta [Bacillus megaterium QM B1551]
 gi|295707208|ref|YP_003600283.1| ATP synthase F1 subunit beta [Bacillus megaterium DSM 319]
 gi|302393677|sp|P12698|ATPB_BACMQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|294351797|gb|ADE72126.1| ATP synthase F1, beta subunit [Bacillus megaterium QM B1551]
 gi|294804867|gb|ADF41933.1| ATP synthase F1, beta subunit [Bacillus megaterium DSM 319]
          Length = 473

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D  +  G     I  + P   N     +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGEKIDLDAPIDAGARRDPIHRQAPKFENLSTQAEILETGIKVVDLLAPYI 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +K
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R+   LT +T+AEYF   +G +VL  +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + R++E +DI  I 
Sbjct: 328 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYAIARQVQQTLQRYKELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|190358289|sp|A1R7V3|ATPB_ARTAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 483

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LGKP+D ++S  K D    I  K P   + +   +  +TGI+VID+ TP   G 
Sbjct: 102 GHIFNVLGKPLDVEESEIKADAYWPIHRKAPSFASLEGSTEMLETGIKVIDLLTPYIKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 282 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR+ D  +   D       +  ++ + +E +DI  I G
Sbjct: 340 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 397


>gi|323705922|ref|ZP_08117493.1| ATP synthase F1, beta subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534720|gb|EGB24500.1| ATP synthase F1, beta subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 461

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 20/329 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LGK +D    LG  K D  M I    P    +  V +  +TGI+VID+ TP  
Sbjct: 84  LGRMFNVLGKTMD---ELGEVKADKYMPIHRDAPSFEEQSPVTEILETGIKVIDLLTPYA 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIEELIRNIATEHGGYSIFTGVGERTREGNDLWHEMKESGVID 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+  V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G
Sbjct: 201 KTAFVFGQMNEPPGARMRVALTGLTMAEYFRDEKHQDVLLFIDNIFRFVQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +EL  L ERI  +    G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 261 RMPSAVGYQPTLATELGALQERI--TSTRSGSITSVQAVYVPADDLTDPAPATTFTHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+RS+ E G YP VDPL S SR+ +     +E   V+  +  ++ +++E +DI  I 
Sbjct: 319 TTVLSRSIVEMGIYPAVDPLDSTSRILEPNIVGEEHYTVARRVQEILQKYKELQDIIAI- 377

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419
               G+D + D+    V++   I  FL Q
Sbjct: 378 ---LGMDELSDEDKLTVYRARKIQRFLSQ 403


>gi|78224596|ref|YP_386343.1| F0F1 ATP synthase subunit beta [Geobacter metallireducens GS-15]
 gi|118573539|sp|Q39Q56|ATPB_GEOMG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78195851|gb|ABB33618.1| ATP synthase F1 subcomplex beta subunit [Geobacter metallireducens
           GS-15]
          Length = 470

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR++N +G+P+D    +G  +   E  I  + P  +++    + F TGI+V+D+  P  
Sbjct: 92  LGRILNVIGEPVD---EMGPVNAEKEYGIHRESPSFVDQSTKVEAFTTGIKVVDLLAPYA 148

Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213
            G +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  + ++E      
Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGV 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           L K+ +V    +E P  R    L+A++IAEYF   +G NVLL +D+I RF  +  E++  
Sbjct: 207 LDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFIDNIFRFTQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  DP   +  + L
Sbjct: 267 LGRIPSAVGYQPTLATEMGELQERI--TSTTKGSITSVQAIYVPADDLTDPAPATAFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+R +AE G YP VDPL S SR+ D     +E   ++  + +++ ++++ +DI  
Sbjct: 325 DATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQVQYVLQKYKDLQDIIA 384

Query: 392 IGG 394
           I G
Sbjct: 385 ILG 387


>gi|257459080|ref|ZP_05624199.1| ATP synthase F1, beta subunit [Campylobacter gracilis RM3268]
 gi|257443465|gb|EEV18589.1| ATP synthase F1, beta subunit [Campylobacter gracilis RM3268]
          Length = 465

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N  G  ID G+D   K +    I    P   N+    + F+TGI+V+D+  P   
Sbjct: 87  LGRIFNVTGDLIDEGEDE--KFETRWSIHRDPPSFENQSTKSEIFETGIKVVDLLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L K
Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESGVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
             +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G 
Sbjct: 205 VALTYGQMNEPPGARNRIALTGLTMAEYFRDELGLDVLMFIDNIFRFSQSGSEMSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   +V + LD  
Sbjct: 265 IPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VLNR++AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQAVLQKYKDLQDIIAILG 382


>gi|728922|sp|P41009|ATPB_BACCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|533290|dbj|BAA07248.1| ATPase subunit beta [Bacillus caldotenax]
          Length = 473

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 173/331 (52%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID +  +   D   + + +  P       E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG+ T++ ++ V  D++ DP   +  S LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAKGSTTSIQAIYVPADDYTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R++AE G YP VDPLAS SR LA +    +  ++   +   + R++E +DI  I
Sbjct: 327 ATTNLERNVAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + D+    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|142561|gb|AAA82526.1| ATP synthase beta subunit [Bacillus megaterium]
          Length = 472

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D  +  G     I  + P   N     +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGEKIDLDAPIDAGARRDPIHRQAPKFENLSTQAEILETGIKVVDLLAPYI 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +K
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R+   LT +T+AEYF   +G +VL  +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + R++E +DI  I 
Sbjct: 328 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYAIARQVQQTLQRYKELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|283955273|ref|ZP_06372773.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793187|gb|EFC31956.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           414]
          Length = 465

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 168/317 (52%), Gaps = 27/317 (8%)

Query: 103 GRVINALGKPID---GDDSLGK-----GDLSME----------IMSKVPPAMNRQRVEKG 144
           G  + ALG PI    G+  LG+     GDL  E           + + PPA   Q  +  
Sbjct: 68  GLKVEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISFDKKWAIHRDPPAFEEQSTKSE 127

Query: 145 -FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200
            F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + VGER R
Sbjct: 128 IFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTR 187

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
           E  +   +    N L K  +     +E P  R    LT +T+AEYF  + + +VL+ +D+
Sbjct: 188 EGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMELDVLMFIDN 247

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D
Sbjct: 248 IFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPAD 305

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D     +E  K+   + 
Sbjct: 306 DLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQ 365

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ ++++ +DI  I G
Sbjct: 366 SVLQKYKDLQDIIAILG 382


>gi|229199429|ref|ZP_04326092.1| ATP synthase subunit beta [Bacillus cereus m1293]
 gi|228584005|gb|EEK42160.1| ATP synthase subunit beta [Bacillus cereus m1293]
 gi|324329253|gb|ADY24513.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 468

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 87  ATLGRVFNVLGDAIDLDGEV-PSDVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|149925408|ref|ZP_01913672.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105]
 gi|149825525|gb|EDM84733.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105]
          Length = 463

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D +  I    P         +  +TGI+VID+  P   G 
Sbjct: 88  GRIMDVLGRPIDEAGPVTT-DATRAIHQNAPAFDELSPSTELLETGIKVIDLICPFAKGG 146

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 147 KVGLFGGAGVGKTVNMMELINNIAKQHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  +G +VLL +D+I RF  +  E++   G +P
Sbjct: 206 ALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFVDNIYRFTLAGTEVSALLGRMP 265

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  +KG+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 266 SAVGYQPTLAEEMGRLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 323

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RDI  I G
Sbjct: 324 LSRDIASLGIYPAVDPLDSTSRQVDPNIIGEEHYNVARGVQQTLQRYKELRDIIAILG 381


>gi|119961004|ref|YP_948315.1| F0F1 ATP synthase subunit beta [Arthrobacter aurescens TC1]
 gi|119947863|gb|ABM06774.1| ATP synthase F1, beta subunit [Arthrobacter aurescens TC1]
          Length = 486

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LGKP+D ++S  K D    I  K P   + +   +  +TGI+VID+ TP   G 
Sbjct: 105 GHIFNVLGKPLDVEESEIKADAYWPIHRKAPSFASLEGSTEMLETGIKVIDLLTPYIKGG 164

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 165 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 225 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 285 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR+ D  +   D       +  ++ + +E +DI  I G
Sbjct: 343 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 400


>gi|71894420|ref|YP_278528.1| F0F1 ATP synthase subunit beta [Mycoplasma synoviae 53]
 gi|118573701|sp|Q4A604|ATPB_MYCS5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71851208|gb|AAZ43817.1| ATP synthase beta chain [Mycoplasma synoviae 53]
          Length = 464

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ + LG PID +  L +G     I   +P    ++   +  +TGI+VID+  P   G
Sbjct: 89  LGRMFDVLGNPID-ELPLEEGGEKSSIHGPIPTYEQQKTTSEILETGIKVIDLLIPYAKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+
Sbjct: 148 GKIGLFGGAGVGKTVLVQELINNIATQHNGLSVFTGVGERTREGNDLYYEMKAAGVLDKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  K + +VLL +D+I RF  +  E++   G +
Sbjct: 208 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKQNQDVLLFIDNIFRFTQAGSEVSALLGRI 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  S LD   
Sbjct: 268 PSAVGYQPTLATEMGALQERI--TSTRSGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP +DPL S SRL D      E  K+   + +++ RF+E +DI  I G
Sbjct: 326 VLDRNVAALGIYPAIDPLESSSRLLDPLVVGQEHYKVAQDVINILQRFKELQDIIAILG 384


>gi|291521330|emb|CBK79623.1| ATP synthase F1 subcomplex beta subunit [Coprococcus catus GD/7]
          Length = 462

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 162/298 (54%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID  ++  + +  + I  K P   +    ++  +TGI+V+D+  P   G
Sbjct: 89  LGRIFNVLGEAIDNKEA-PQAEEHLPIHRKPPAFEDLSDEQEILETGIKVVDLLCPYQKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  + + E      + K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYTEMSESGVINKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F   G +VLL +D+I RF  +  E++   G +P
Sbjct: 208 TMVFGQMNEPPGSRMRVGLTGLTMAEHFRDTGKDVLLFIDNIFRFTQAGSEVSALLGRVP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 268 SAVGYQPTLQTEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+ E G YP VDPL S SR+ D     +E  ++  S+  ++ R++E +DI  I G
Sbjct: 326 LSRSIVELGIYPAVDPLESTSRMLDPHIVGEEHYRVARSVQEILQRYKELQDIIAILG 383


>gi|57237114|ref|YP_178126.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni RM1221]
 gi|86149745|ref|ZP_01067975.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86151230|ref|ZP_01069445.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86154037|ref|ZP_01072238.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|88597713|ref|ZP_01100946.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|121613266|ref|YP_999831.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148926907|ref|ZP_01810585.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414420|ref|YP_001481676.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           81116]
 gi|167004802|ref|ZP_02270560.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205356482|ref|ZP_03223246.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561788|ref|YP_002343567.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|81819580|sp|Q5HX59|ATPB_CAMJR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122953061|sp|Q0PC30|ATPB_CAMJE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358271|sp|A8FJR2|ATPB_CAMJ8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358273|sp|A1VXJ0|ATPB_CAMJJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|57165918|gb|AAW34697.1| ATP synthase F1, beta subunit [Campylobacter jejuni RM1221]
 gi|85840013|gb|EAQ57272.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841577|gb|EAQ58824.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85842451|gb|EAQ59665.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87248948|gb|EAQ71910.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|88190017|gb|EAQ93993.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359494|emb|CAL34278.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145844484|gb|EDK21592.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385384|gb|ABV51699.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205345669|gb|EDZ32308.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|284925400|gb|ADC27752.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|307747064|gb|ADN90334.1| ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni M1]
 gi|315057547|gb|ADT71876.1| ATP synthase beta chain [Campylobacter jejuni subsp. jejuni S3]
 gi|315926955|gb|EFV06317.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315931501|gb|EFV10468.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           327]
          Length = 465

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N  G  ID  + +   D    I  + PPA   Q  +   F+TGI+V+D+  P   
Sbjct: 87  LGRIFNVTGDLIDEGEEI-SFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K
Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
             +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G 
Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD  
Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VLNR++AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|332687028|ref|YP_004456802.1| ATP synthase subunit beta [Melissococcus plutonius ATCC 35311]
 gi|332371037|dbj|BAK21993.1| ATP synthase beta chain [Melissococcus plutonius ATCC 35311]
          Length = 468

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    K      I    P        ++  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEKPFPKEAKRSGIHKTAPTFEELSTSDEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +    +   + + + H++ R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYHIATEVQHVLQRYRELQDIIAILG 385


>gi|229076520|ref|ZP_04209480.1| ATP synthase subunit beta [Bacillus cereus Rock4-18]
 gi|229099738|ref|ZP_04230663.1| ATP synthase subunit beta [Bacillus cereus Rock3-29]
 gi|229118801|ref|ZP_04248150.1| ATP synthase subunit beta [Bacillus cereus Rock1-3]
 gi|228664602|gb|EEL20095.1| ATP synthase subunit beta [Bacillus cereus Rock1-3]
 gi|228683627|gb|EEL37580.1| ATP synthase subunit beta [Bacillus cereus Rock3-29]
 gi|228706553|gb|EEL58766.1| ATP synthase subunit beta [Bacillus cereus Rock4-18]
          Length = 469

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  L   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|7436091|pir||JC5741 membrane-bound proton-translocating ATPase (EC 3.6.1.-) beta chain
           - Streptococcus mutans
          Length = 469

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 9/315 (2%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           VF  GR    P      GRV N LG  ID D    +      I  K P   +     +  
Sbjct: 73  VFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDDLSTSTEIL 132

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202
           +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE 
Sbjct: 133 ETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREG 192

Query: 203 RE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I 
Sbjct: 193 NDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIF 252

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++
Sbjct: 253 RFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDY 310

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379
            DP   +  + LD    L R L + G YP VDPLAS SR L+ +    +   + + + H+
Sbjct: 311 TDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLASSSRALSPEIVGQEHYDVATEVQHV 370

Query: 380 IHRFEETRDIRLIGG 394
           + R+ E +DI  I G
Sbjct: 371 LQRYRELQDIIAILG 385


>gi|225872677|ref|YP_002754134.1| ATP synthase F1, beta subunit [Acidobacterium capsulatum ATCC
           51196]
 gi|254808125|sp|C1F3N6|ATPB_ACIC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|225794312|gb|ACO34402.1| ATP synthase F1, beta subunit [Acidobacterium capsulatum ATCC
           51196]
          Length = 480

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 167/307 (54%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N +G+P+D    + +  + M I  + P    +   E+ F+TG++VID+  P   G 
Sbjct: 94  GRVLNVIGEPVDNMGPV-QAKVHMPIHRQAPAFDEQATGEEMFETGVKVIDLIQPFLKGG 152

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR----EFIEDYLGD- 212
           +IG+F G+G+GK+ ++     ++ ++   F   + + VGER RE      EF E  + D 
Sbjct: 153 KIGLFGGAGVGKTVVIQELINNVASKHGGFS--VFAGVGERTREGNDLWLEFQEAGVIDI 210

Query: 213 ---NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
              +  K+ ++     E P  R    LT +T+AEYF   +G + LL +D+I RF  +  E
Sbjct: 211 HDFSKSKAALIYGQMTEPPGARLRVALTGLTVAEYFRDQEGADTLLFIDNIFRFTQAGSE 270

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++T  G +P A GY  ++ +E+  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 271 VSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKKGSVTSVQAVYVPADDMTDPAPATT 328

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R L+E G YP VDPLAS SR+   A    E   +   +  ++ R+++ +
Sbjct: 329 FAHLDATTVLSRPLSELGIYPAVDPLASTSRILTPAVVGQEHYDVAQGVKRILQRYKDLQ 388

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 389 DIIAILG 395


>gi|228942452|ref|ZP_04104989.1| ATP synthase subunit beta [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975384|ref|ZP_04135940.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982021|ref|ZP_04142314.1| ATP synthase subunit beta [Bacillus thuringiensis Bt407]
 gi|228777685|gb|EEM25959.1| ATP synthase subunit beta [Bacillus thuringiensis Bt407]
 gi|228784366|gb|EEM32389.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817194|gb|EEM63282.1| ATP synthase subunit beta [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326943103|gb|AEA18999.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 468

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  L   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 87  ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|320108421|ref|YP_004184011.1| ATP synthase F1 subunit beta [Terriglobus saanensis SP1PR4]
 gi|319926942|gb|ADV84017.1| ATP synthase F1, beta subunit [Terriglobus saanensis SP1PR4]
          Length = 480

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 164/308 (53%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV+N +G+P+D    LG  +    M I  + P    +   E+ F+TGI+V+D+  P  
Sbjct: 93  LGRVLNVIGEPVD---ELGPVQTQKRMPIHRQAPAFDEQSTSEEMFETGIKVVDLIQPFL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVR----EFIEDYLGD 212
            G +IG+  G+G+GK+ L+     +         + + VGER RE      EF E  + D
Sbjct: 150 KGGKIGLMGGAGVGKTVLIQELINNVAMQHGGFSVFAGVGERTREGNDLWMEFQESGVID 209

Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  K+ ++     E P  R    LTA+TIAE+F   +G + LL +D+I RF  +  
Sbjct: 210 PNDWKKSKAALIYGQMTEPPGARLRVALTALTIAEHFRDEEGADTLLFIDNIFRFTQAGS 269

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++T  G +P A GY  ++ SE+ +L ERI  +  +KG++T+V ++ V  D+  DP   +
Sbjct: 270 EVSTLLGRMPSAVGYQPNLASEMGQLQERI--TSTKKGSVTSVQAIYVPADDFTDPAPAT 327

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VLNR+L E G YP VDPLAS SR L+ +    +      S+  ++ R+++ 
Sbjct: 328 TFAHLDATTVLNRALTEIGIYPAVDPLASNSRILSPRIVGEEHYNTAQSVKAILQRYKDL 387

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 388 QDIIAILG 395


>gi|38906123|gb|AAR27814.1| ATP synthase beta chain [Lactobacillus rhamnosus]
          Length = 371

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID  ++ G       I    P   +     +  +TGI+VID+  P   G
Sbjct: 28  LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 87

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+ +
Sbjct: 88  GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 147

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 207

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 265

Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L R L E+G YP VDPL +S S L  +    +  K+ + +  ++ R+ E +DI
Sbjct: 266 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 319


>gi|331091995|ref|ZP_08340826.1| ATP synthase subunit beta [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330402196|gb|EGG81767.1| ATP synthase subunit beta [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 463

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 159/294 (54%), Gaps = 11/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID  +     D+    + +  PA   Q  E +  +TGI+VID+  P   G
Sbjct: 90  GRIFNVLGEAID--EKPAPTDVEYAPIHRKAPAFEEQATEAEMLETGIKVIDLLCPYQKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   + +    + K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMMESGVINKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAKV 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+R++ E G YP VDPL S SR+ D     +E  K+   +  ++ +++E +DI
Sbjct: 326 VLSRAITELGIYPAVDPLESSSRMLDPHIVGEEHYKVARGVQEILQKYKELQDI 379


>gi|228961569|ref|ZP_04123178.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229050976|ref|ZP_04194525.1| ATP synthase subunit beta [Bacillus cereus AH676]
 gi|229130555|ref|ZP_04259511.1| ATP synthase subunit beta [Bacillus cereus BDRD-Cer4]
 gi|228652894|gb|EEL08776.1| ATP synthase subunit beta [Bacillus cereus BDRD-Cer4]
 gi|228722353|gb|EEL73749.1| ATP synthase subunit beta [Bacillus cereus AH676]
 gi|228798051|gb|EEM45055.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 459

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  L   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 78  ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 136 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 194

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 195 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 254

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 255 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 312

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 313 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 372

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 373 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 401


>gi|199597576|ref|ZP_03211005.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus HN001]
 gi|258508179|ref|YP_003170930.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus GG]
 gi|199591599|gb|EDY99676.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus HN001]
 gi|257148106|emb|CAR87079.1| ATP synthase B chain [Lactobacillus rhamnosus GG]
          Length = 488

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID  ++ G       I    P   +     +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+ +
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L R L E+G YP VDPL +S S L  +    +  K+ + +  ++ R+ E +DI
Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 380


>gi|192289482|ref|YP_001990087.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris TIE-1]
 gi|192283231|gb|ACE99611.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris TIE-1]
          Length = 474

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 160/294 (54%), Gaps = 10/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+++ +G   D   +L   D     +   PPA+N +      F+TG++VID+  PL  G
Sbjct: 91  GRLLDVVGTVQDRGLAL-PSDTPRRGIHNPPPALNEETSTSAVFETGVKVIDLLAPLAQG 149

Query: 162 QRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKS 217
            +  +F G+G+GK+ L+   + A  + +  + + + VGER RE  E + D      L ++
Sbjct: 150 GKAAMFGGAGVGKTVLVMELIHAMVEKYQGISVFAGVGERSREGHELLTDMQRSGVLART 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R   PLTA+TIAEYF   K  NVLL++D++ RF  +  E+++  G L
Sbjct: 210 VLVYGQMNEPPGARWRVPLTALTIAEYFRDQKHQNVLLLMDNVFRFVQAGSELSSLLGRL 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ +E+  L ERI  +      +TA+ +V V  D+  DP   ++ S  D  I
Sbjct: 270 PSRVGYQPTLATEVASLQERI--ASVAGAAVTAIQAVYVPADDFTDPAVTTISSHTDSVI 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           +L+RSLA +G YP VDPLAS S L D     +E  +L       + RF++ +DI
Sbjct: 328 MLSRSLAAQGFYPAVDPLASSSVLLDPRVVGEEHYRLAERCRETLARFKDLQDI 381


>gi|254498507|ref|ZP_05111233.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12]
 gi|254352283|gb|EET11092.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12]
          Length = 396

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 165/313 (52%), Gaps = 10/313 (3%)

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G LV+  G   +I  S    GR++N  G+P+DG + L   +   +I++K  P       E
Sbjct: 4   GLLVYDQGTSLQIPVSPNCLGRLLNVFGEPLDGGEPLQTKEYR-DILAKPAPIEMTTTKE 62

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERG 199
              +TGI+VID+  P   G + G+F G+G+GK+ LL  F  S       IS+   VGER 
Sbjct: 63  TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTILLMEFMHSIIQLHQGISVFAGVGERI 122

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257
           RE  E   +      + K+++V    DESP +R  A L+A+T AEY   +    VL ++D
Sbjct: 123 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRAGLSALTYAEYLRDTVAHEVLFLVD 182

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  EI+   G +P   GY  ++ +E+  L ERI  +   KG++T+V +V V  
Sbjct: 183 NIYRFVQAGSEISGLLGRMPANVGYQPTLMTEIAELEERI--TSTAKGSVTSVQAVYVPA 240

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376
           D+ +DP    + + LD  +VL+RS A +G YP VD LAS S+  DK    +    +  ++
Sbjct: 241 DDMSDPAVTGIITHLDSIVVLSRSQAGKGIYPAVDALASKSKFMDKIVLGERHYSIAQAV 300

Query: 377 THLIHRFEETRDI 389
              + R+ E  DI
Sbjct: 301 REHLARYRELEDI 313


>gi|229551980|ref|ZP_04440705.1| H(+)-transporting two-sector ATPase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258539394|ref|YP_003173893.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus Lc 705]
 gi|229314715|gb|EEN80688.1| H(+)-transporting two-sector ATPase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151070|emb|CAR90042.1| ATP synthase B chain [Lactobacillus rhamnosus Lc 705]
          Length = 488

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID  ++ G       I    P   +     +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+ +
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L R L E+G YP VDPL +S S L  +    +  K+ + +  ++ R+ E +DI
Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 380


>gi|587507|emb|CAA54205.1| ATPase beta-subunit [Peptococcus niger]
          Length = 427

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 160/296 (54%), Gaps = 9/296 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G PID    +   +    I    P  + +   ++  +TGI+V+D+  P  
Sbjct: 93  ATLGRLMNVVGDPIDEAGEV-PSETRWPIHRSAPTYVQQNPSKEILETGIKVVDLLCPYV 151

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREF-IEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+  ++     + + VGER RE ++  +E      + 
Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELIRNIAYEHGGYSVFAGVGERTREGKDLLVEMRESGVID 211

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 212 KTSLVFGQMNEPPGARMRIALTGLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLG 271

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 272 RMPSAVGYQPTLATEMGTMQERI--TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDA 329

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             VL RS++E+G YP VDPLAS SR+ D     +E  ++   +  ++  + E +DI
Sbjct: 330 TTVLERSISEKGIYPAVDPLASTSRILDPRIVGEEHYEIARDVQEVLQEYRELQDI 385


>gi|227535354|ref|ZP_03965403.1| H(+)-transporting two-sector ATPase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227186950|gb|EEI67017.1| H(+)-transporting two-sector ATPase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 488

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 154/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  IDG ++ G       I    P   +     +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDSIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+ +
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            L R L E+G YP VDPL S S         DE  K+ + +  ++ R+ E +DI
Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDI 380


>gi|30023337|ref|NP_834968.1| F0F1 ATP synthase subunit beta [Bacillus cereus ATCC 14579]
 gi|47569800|ref|ZP_00240471.1| ATP synthase F1, beta subunit [Bacillus cereus G9241]
 gi|218231162|ref|YP_002370080.1| F0F1 ATP synthase subunit beta [Bacillus cereus B4264]
 gi|229112719|ref|ZP_04242252.1| ATP synthase subunit beta [Bacillus cereus Rock1-15]
 gi|229147846|ref|ZP_04276187.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST24]
 gi|296505733|ref|YP_003667433.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis BMB171]
 gi|81837221|sp|Q814W2|ATPB_BACCR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739978|sp|B7HFK1|ATPB_BACC4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|29898898|gb|AAP12169.1| ATP synthase beta chain [Bacillus cereus ATCC 14579]
 gi|47553542|gb|EAL11922.1| ATP synthase F1, beta subunit [Bacillus cereus G9241]
 gi|218159119|gb|ACK59111.1| ATP synthase F1, beta subunit [Bacillus cereus B4264]
 gi|228635496|gb|EEK91985.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST24]
 gi|228670700|gb|EEL26011.1| ATP synthase subunit beta [Bacillus cereus Rock1-15]
 gi|296326785|gb|ADH09713.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis BMB171]
          Length = 468

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  L   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 87  ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|153951038|ref|YP_001397361.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. doylei
           269.97]
 gi|190358272|sp|A7H1I1|ATPB_CAMJD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|152938484|gb|ABS43225.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 484

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 162/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N  G  ID  + +   D    I  + PPA   Q  +   F+TGI+V+D+  P   G
Sbjct: 88  GRIFNVTGDLIDEGEEI-PFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD   
Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR++AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|254250201|ref|ZP_04943521.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184]
 gi|124876702|gb|EAY66692.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184]
          Length = 386

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 6/185 (3%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV++ LG+P+D    LG   G   +      P  + R+ ++  F TG+RVID    L  
Sbjct: 34  GRVLDGLGRPLD---DLGPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGI 90

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           GQR+G+FA SG+GKSTLL M AR    D  +I+LVGERGREVREFIE  L   ++ +S+V
Sbjct: 91  GQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIV 150

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VV+TSD   + R  + L A  IAE+F   G  VLL++DS+TRFA + RE+   SGE P  
Sbjct: 151 VVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTR 210

Query: 280 RGYPT 284
           R +P 
Sbjct: 211 RSFPA 215


>gi|222152834|ref|YP_002562011.1| F0F1 ATP synthase subunit beta [Streptococcus uberis 0140J]
 gi|254808167|sp|B9DRT6|ATPB_STRU0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222113647|emb|CAR41560.1| ATP synthase beta chain [Streptococcus uberis 0140J]
          Length = 468

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+ ID D+     D + E + K  PA +         +TGI+VID+  P   
Sbjct: 89  LGRVFNVLGETIDLDEPFA-ADAAREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L + G YP VDPLAS SR L+ +    +  ++ + +  ++ R+ E +DI  I G
Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALSPEIVGQEHYEVATEVQRVLQRYRELQDIIAILG 385


>gi|311033322|ref|ZP_07711412.1| F0F1 ATP synthase subunit beta [Bacillus sp. m3-13]
          Length = 472

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 168/330 (50%), Gaps = 15/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D  +  G     I  + P         +  +TGI+V+D+  P  
Sbjct: 89  VTLGRVFNVLGENIDLDAPIAAGSRRDPIHRQAPTFDQLSTDVEILETGIKVVDLLAPYI 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +K
Sbjct: 149 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +  E++   G
Sbjct: 209 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDDQGQDVLFFMDNIFRFTQAGSEVSALLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 269 RMPSAVGYQPTLATEMGQLQERI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR LA +    D   +   +   + R++E +DI  I 
Sbjct: 327 TTNLERKLSEMGIYPAVDPLASTSRALAPEVVGDDHYAVAREVQVTLQRYKELQDIIAI- 385

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + D+    VH+   I  FL Q+
Sbjct: 386 ---LGMDELTDEDKLTVHRARRIQFFLSQN 412


>gi|1168579|sp|P42467|ATPB_PEPNI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 427

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 160/296 (54%), Gaps = 9/296 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G PID    +   +    I    P  + +   ++  +TGI+V+D+  P  
Sbjct: 93  ATLGRLMNVVGDPIDEAGEV-PSETRWPIHRSAPTYVQQNPSKEILETGIKVVDLLCPYV 151

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREF-IEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+  ++     + + VGER RE ++  +E      + 
Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELIRNIAYEHGGYSVFAGVGERTREGKDLLVEMRESGVID 211

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 212 KTSLVFGQMNEPPGARMRIALTGLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLG 271

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 272 RMPSAVGYQPTLATEMGTMQERI--TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDA 329

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             VL RS++E+G YP VDPLAS SR+ D     +E  ++   +  ++  + E +DI
Sbjct: 330 TTVLERSISEKGIYPAVDPLASTSRILDPRIVGEEHYEIARDVQEVLQEYRELQDI 385


>gi|239623864|ref|ZP_04666895.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521895|gb|EEQ61761.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 466

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG  IDG  SL   D    ++ + PP+   Q  V +  +TGI+VID+  P   G
Sbjct: 86  GRLFNVLGDTIDGGQSLE--DEEKWVIHRDPPSFEDQSPVVEMLETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   + +G++  L+K
Sbjct: 144 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDVEHQNVLLFIDNIFRFVQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEVGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ ++     E  ++ + +  ++ +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEEDVVGKEHYEVANKVQQMLQKYKELQDIIAILG 380


>gi|283955551|ref|ZP_06373046.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283793012|gb|EFC31786.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 465

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N  G  ID  + +   D    I  + PPA   Q  +   F+TGI+V+D+  P   
Sbjct: 87  LGRIFNVTGDLIDEGEEI-PFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K
Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
             +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G 
Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD  
Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VLNR++AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|322392085|ref|ZP_08065547.1| ATP synthase F1 sector beta subunit [Streptococcus peroris ATCC
           700780]
 gi|321144985|gb|EFX40384.1| ATP synthase F1 sector beta subunit [Streptococcus peroris ATCC
           700780]
          Length = 468

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 159/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +   G+      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFGEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +   A+   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGAEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|251799778|ref|YP_003014509.1| ATP synthase F1 subunit beta [Paenibacillus sp. JDR-2]
 gi|247547404|gb|ACT04423.1| ATP synthase F1, beta subunit [Paenibacillus sp. JDR-2]
          Length = 467

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 166/304 (54%), Gaps = 13/304 (4%)

Query: 99  ACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
           A   GRV N LG+PID   +++ + +L +    +  PA +    +    +TGI+VID+  
Sbjct: 88  AATLGRVFNVLGEPIDQAGEAVSETNLPIH---RQAPAFDELSTQSEILETGIKVIDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+  +     +   +   IS+   VGER RE  +   +     
Sbjct: 145 PYAKGGKIGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            L K+ +V    +E P  R+   LT +T+AEYF  ++G +VLL +D+I RF  +  E++ 
Sbjct: 205 VLPKTAMVFGQMNEPPGARQRVALTGLTMAEYFRDAEGKDVLLFVDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L R ++E G +P VDPLAS SRL +     +E   +   +  ++ R++E +DI 
Sbjct: 323 LDATTNLERKISEMGIFPAVDPLASSSRLLNPEILGEEHYNVAQGVKRILQRYKELQDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|206895415|ref|YP_002246928.1| ATP synthase F1, beta subunit [Coprothermobacter proteolyticus DSM
           5265]
 gi|226740182|sp|B5Y831|ATPB_COPPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|206738032|gb|ACI17110.1| ATP synthase F1, beta subunit [Coprothermobacter proteolyticus DSM
           5265]
          Length = 451

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 170/328 (51%), Gaps = 13/328 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +G  E I  GD     G+   I       GRV++ +G P+D  +     + S+  
Sbjct: 46  VRTVALGPTEGIRRGDKATALGKPMTIKVGEQLIGRVLSGIGAPLDQKEEPEGEERSV-- 103

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
              VPP +     V    +TGI+ +D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 104 -FNVPPQVTAVLPVSTVLETGIKALDLLAPFPRGGKIGLFGGAGVGKTVLVMELIHNVAI 162

Query: 188 DK---VIISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAE 243
                 + + VGER RE +E  E+     +   +V++    +E P +R + P  A T+AE
Sbjct: 163 KHRGYSVFAGVGERTREGQELWEEMRESGVMDHLVMIFGQMNEPPGVRAITPYAAATVAE 222

Query: 244 YFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           Y  S+ G  +LL +D+I R+A +  E++T  G +P A GY  ++FSE+ ++ ERI  +  
Sbjct: 223 YLRSQYGGEILLFMDNIFRYAQAGMEVSTLLGRMPSAMGYQPTLFSEVAQIEERI--NSL 280

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G IT+V +V V  D+  DP   ++   LD  +VL+R+L E G YP VDPL S S++ D
Sbjct: 281 AEGAITSVQAVYVPADDITDPAPATIFGHLDSSVVLSRALTEVGIYPAVDPLQSSSKMLD 340

Query: 363 -KAWSADEKKLVSSLTHLIHRFEETRDI 389
            +    +  ++   +   + R+EE +DI
Sbjct: 341 PEVVGYNHVQVAGRVKEFLQRYEELKDI 368


>gi|225420333|ref|ZP_03762636.1| hypothetical protein CLOSTASPAR_06677 [Clostridium asparagiforme
           DSM 15981]
 gi|225041019|gb|EEG51265.1| hypothetical protein CLOSTASPAR_06677 [Clostridium asparagiforme
           DSM 15981]
          Length = 467

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ IDG DSL   D     + + PPA   Q  V +  +TGI+VID+  P   G
Sbjct: 86  GRLFNVLGETIDGGDSLT--DSPQWEIHREPPAFEDQSPVVEMLETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  + + E      L+K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGSRMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFVQAGSEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  + G++T+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEMGQLQERI--TSTKNGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ +      E  +    +  ++ +++E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLESNSRILEAEVVGQEHYETARQVQQILQKYKELQDIIAILG 380


>gi|53722974|ref|YP_111959.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei K96243]
 gi|52213388|emb|CAH39431.1| ATP synthase beta chain [Burkholderia pseudomallei K96243]
          Length = 511

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G P D   +L        I    PP   ++     F TGI+
Sbjct: 81  GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 140

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 141 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 198

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 199 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 259 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 317 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 376

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 377 YRELQDV 383


>gi|223932788|ref|ZP_03624785.1| ATP synthase F1, beta subunit [Streptococcus suis 89/1591]
 gi|253751912|ref|YP_003025053.1| ATP synthase beta chain [Streptococcus suis SC84]
 gi|253753735|ref|YP_003026876.1| ATP synthase beta chain [Streptococcus suis P1/7]
 gi|253755387|ref|YP_003028527.1| ATP synthase beta chain [Streptococcus suis BM407]
 gi|302023926|ref|ZP_07249137.1| F0F1 ATP synthase subunit beta [Streptococcus suis 05HAS68]
 gi|330832977|ref|YP_004401802.1| F0F1 ATP synthase subunit beta [Streptococcus suis ST3]
 gi|190358731|sp|A4W1V7|ATPB_STRS2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358732|sp|A4VVJ9|ATPB_STRSY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|223898497|gb|EEF64861.1| ATP synthase F1, beta subunit [Streptococcus suis 89/1591]
 gi|251816201|emb|CAZ51828.1| ATP synthase beta chain [Streptococcus suis SC84]
 gi|251817851|emb|CAZ55604.1| ATP synthase beta chain [Streptococcus suis BM407]
 gi|251819981|emb|CAR46125.1| ATP synthase beta chain [Streptococcus suis P1/7]
 gi|319758273|gb|ADV70215.1| F0F1 ATP synthase subunit beta [Streptococcus suis JS14]
 gi|329307200|gb|AEB81616.1| F0F1 ATP synthase subunit beta [Streptococcus suis ST3]
          Length = 468

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG  ID ++S    D   E + K  PA +         +TGI+VID+  P   
Sbjct: 89  LGRVFNVLGDTIDLEESF-PADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L + G YP VDPLAS SR LA +    +   +   +  ++ R++E +DI  I G
Sbjct: 326 TNLERKLTQLGIYPAVDPLASSSRALAPQIVGEEHYAVAMEVKRVLQRYQELQDIIAILG 385


>gi|228968432|ref|ZP_04129422.1| ATP synthase subunit beta [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791248|gb|EEM38860.1| ATP synthase subunit beta [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 459

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  L   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 78  VTLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 136 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 194

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 195 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 254

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 255 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 312

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 313 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 372

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 373 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 401


>gi|288939810|ref|YP_003442050.1| ATP synthase F1 subunit beta [Allochromatium vinosum DSM 180]
 gi|288895182|gb|ADC61018.1| ATP synthase F1, beta subunit [Allochromatium vinosum DSM 180]
          Length = 460

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    + K +    I  + P   ++    +  +TGI+VID+  P+ 
Sbjct: 81  ATLGRIMDVLGNPIDEQGEV-KSEARWSIHRQAPKLEDQAASTEILETGIKVIDLIMPIA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLK 215
            G ++G+F G+G+GK+  L    R+   +    S+   VGER RE  +F  +   G  L 
Sbjct: 140 KGGKVGLFGGAGVGKTVTLMELIRNIAVEHSGFSVFAGVGERTREGNDFYHEMKDGGVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AEYF  +G +VL+ +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMFIDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ SE+  L ERI  +    G+IT+  +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLASEMGALQERI--TSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +AE G YP VDPL S SR+ D      E  +   ++   + R++E +DI  I G
Sbjct: 318 LVLSRQIAELGIYPAVDPLDSTSRILDPNVVGTEHYETARAVQGTLQRYKELKDIIAILG 377


>gi|160881854|ref|YP_001560822.1| F0F1 ATP synthase subunit beta [Clostridium phytofermentans ISDg]
 gi|190358661|sp|A9KK92|ATPB_CLOPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160430520|gb|ABX44083.1| ATP synthase F1, beta subunit [Clostridium phytofermentans ISDg]
          Length = 472

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG PID  ++    ++    + +  PA   Q  +    +TGI+V+D+  P   
Sbjct: 95  LGRMFNVLGNPIDEKEA--PKNVEYYPIHRKAPAFEEQSTQTEILETGIKVVDLLCPYQK 152

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   + +    + K
Sbjct: 153 GGKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMIDSGVINK 212

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF  +  E++   G 
Sbjct: 213 TTMVFGQMNEPPGARMRVGLTGLTMAEYFRDKSGKDVLLFIDNIFRFTQAGSEVSALLGR 272

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 273 MPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAT 330

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+RS+ E G YP VDPL S SR+ D     +E  K+   +  ++ R++E +DI  I G
Sbjct: 331 TVLSRSIVELGIYPAVDPLESTSRMLDPRVVGEEHYKVARDVQEILQRYKELQDIIAILG 390


>gi|295107875|emb|CBL21828.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus obeum A2-162]
          Length = 463

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 161/302 (53%), Gaps = 11/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPL 158
           C  GR+ N LG  +DG D L   D    ++ + PP+   Q+   +  +TGI+VID+  P 
Sbjct: 83  CTLGRLFNVLGDTVDGGDQLD--DAEHWVIHRDPPSFEEQKPAVEILETGIKVIDLLAPY 140

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+    ++   +     I + VGER RE  +   +      L
Sbjct: 141 AKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVL 200

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273
           +K+ +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   
Sbjct: 201 EKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDQEHRDVLLFIDNIFRFVQAGSEVSALL 260

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +    G++T+V +V V  D+  DP   +  + LD
Sbjct: 261 GRMPSAVGYQPTLATEMGELQERIASTTS--GSVTSVQAVYVPADDLTDPAPATTFAHLD 318

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I
Sbjct: 319 ATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYEVARRVQEILQKYKELQDIIAI 378

Query: 393 GG 394
            G
Sbjct: 379 LG 380


>gi|218900431|ref|YP_002448842.1| ATP synthase F1, beta subunit [Bacillus cereus G9842]
 gi|228903779|ref|ZP_04067896.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 4222]
 gi|228911144|ref|ZP_04074950.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 200]
 gi|226739977|sp|B7IQV8|ATPB_BACC2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218541996|gb|ACK94390.1| ATP synthase F1, beta subunit [Bacillus cereus G9842]
 gi|228848507|gb|EEM93355.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 200]
 gi|228855868|gb|EEN00411.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 4222]
          Length = 468

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  L   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 87  VTLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|209915626|ref|NP_001119645.2| ATP synthase subunit beta, mitochondrial [Acyrthosiphon pisum]
          Length = 521

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ PP +     ++   TGI+V+
Sbjct: 126 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAPIHAEAPPFVEMSVEQEILVTGIKVV 184

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 185 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 243

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 244 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 303

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+ 
Sbjct: 304 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTSKGSITSVQAIYVPADDL 361

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     DE   V+  +  +
Sbjct: 362 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGDEHYNVARGVQKI 421

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 422 LQDYKSLQDIIAILG 436


>gi|259649496|dbj|BAI41658.1| F0F1-type ATP synthase subunit beta [Lactobacillus rhamnosus GG]
          Length = 519

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID  ++ G       I    P   +     +  +TGI+VID+  P   G
Sbjct: 120 LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 179

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+ +
Sbjct: 180 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 239

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 240 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 299

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 300 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 357

Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L R L E+G YP VDPL +S S L  +    +  K+ + +  ++ R+ E +DI
Sbjct: 358 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 411


>gi|189426219|ref|YP_001953396.1| F0F1 ATP synthase subunit beta [Geobacter lovleyi SZ]
 gi|226740205|sp|B3EA01|ATPB_GEOLS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189422478|gb|ACD96876.1| ATP synthase F1, beta subunit [Geobacter lovleyi SZ]
          Length = 471

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 164/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +G  +    I  + P   ++    + F TGI+V+D+  P   G
Sbjct: 92  LGRIMNVIGEPVDEMGPIGN-EKEYGIHREAPAFEDQSTKVEAFTTGIKVVDLLAPYARG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +         + + VGER RE  + ++E      L K+
Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAKQHGGYSVFAGVGERTREGNDLWMEMKESGVLDKA 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LTA+++AEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 211 ALVYGQMNEPPGARARVALTALSVAEYFRDEENQDVLLFIDNIFRFTQAGSEVSALLGRI 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 271 PSAVGYQPTLATEMGELQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     +E   V+ S+ +++ ++++ +DI  I G
Sbjct: 329 VLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAVARSVQYVLQKYKDLQDIIAILG 387


>gi|313899126|ref|ZP_07832651.1| ATP synthase F1, beta subunit [Clostridium sp. HGF2]
 gi|312956066|gb|EFR37709.1| ATP synthase F1, beta subunit [Clostridium sp. HGF2]
          Length = 466

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 164/308 (53%), Gaps = 9/308 (2%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR+ N LG+ IDG   +G  + ++ I  + P    +Q   +  +TGI+VI
Sbjct: 79  IRVPVGKEILGRMFNVLGREIDGLGPVGTEN-TLPIHRQAPGFEEQQTSAEMLETGIKVI 137

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +   +     +++ VGER RE  +   + 
Sbjct: 138 DLLCPYSKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVVTGVGERTREGNDMYHEM 197

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267
                L K+V+V    +ESP  R    LT +T+AEYF      +VLL +D+I RF  +  
Sbjct: 198 KDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEYFRDHDHQDVLLFIDNIFRFTQAGS 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +A  G YP VDPL S SR+ D     +E  ++   +  ++ R++E 
Sbjct: 316 AFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQTILQRYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 QDIIAILG 383


>gi|89574469|gb|ABD76365.1| putative ATP synthase beta subunit [Acyrthosiphon pisum]
          Length = 521

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ PP +     ++   TGI+V+
Sbjct: 126 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAPIHAEAPPFVEMSVEQEILVTGIKVV 184

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 185 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 243

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 244 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 303

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+ 
Sbjct: 304 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTSKGSITSVQAIYVPADDL 361

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     DE   V+  +  +
Sbjct: 362 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGDEHYNVARGVQKI 421

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 422 LQDYKSLQDIIAILG 436


>gi|54020006|ref|YP_115570.1| F0F1 ATP synthase subunit beta [Mycoplasma hyopneumoniae 232]
 gi|81823562|sp|Q601Z5|ATPB_MYCH2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|53987179|gb|AAV27380.1| ATP synthase beta chain [Mycoplasma hyopneumoniae 232]
          Length = 471

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 159/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+PIDG   L    +   I +  P  + ++   +   TGI+VID+  P   G +
Sbjct: 91  RMFNVLGQPIDGGKPL-DSFIKNPIHANAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+ +
Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P 
Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ +E+ +L ERI  +   +G+IT+V +V V  D+  DP   +  S LD   VL
Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPLAS SR  +      +  LV+  +  ++ RF+E +DI  I G
Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384


>gi|315123709|ref|YP_004065713.1| ATP synthase subunit B [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017431|gb|ADT65524.1| ATP synthase subunit B [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 465

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N  G  ID  + +   D    I  + PPA   Q  +   F+TGI+V+D   P   
Sbjct: 87  LGRIFNVTGDLIDEGEEI-SFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDFLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K
Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
             +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G 
Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD  
Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VLNR++AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|229917035|ref|YP_002885681.1| F0F1 ATP synthase subunit beta [Exiguobacterium sp. AT1b]
 gi|229468464|gb|ACQ70236.1| ATP synthase F1, beta subunit [Exiguobacterium sp. AT1b]
          Length = 472

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG PID D  +    L   I  + P         +  +TGI+V+D+  P  
Sbjct: 93  ATLGRVFNVLGNPID-DKEVAADVLRAPIHRQAPTFDELSTKVEILETGIKVVDLLAPYI 151

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +K
Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFHEMTDSGVIK 211

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 212 QTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEQGQDVLLFVDNIFRFTQAGSEVSALLG 271

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +   KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 272 RMPSAVGYQPTLATEMGMLQERI--TSTAKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 329

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +  ++  ++   + R++E +DI  I 
Sbjct: 330 TTNLERRLSEMGIYPAVDPLASTSRALSPEIVGKEHYEVARNVQQTLQRYKELQDIIAIL 389

Query: 394 G 394
           G
Sbjct: 390 G 390


>gi|239828585|ref|YP_002951209.1| F0F1 ATP synthase subunit beta [Geobacillus sp. WCH70]
 gi|259585446|sp|C5D990|ATPB_GEOSW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|239808878|gb|ACS25943.1| ATP synthase F1, beta subunit [Geobacillus sp. WCH70]
          Length = 473

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 170/331 (51%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID    +   D   + + +  P       E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDMQGEI-PDDARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G+IT++ ++ V  D++ DP   +  S LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTATGSITSIQAIYVPADDYTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R LAE G YP VDPLAS SR LA +    +  ++   +   + R+ E +DI  I
Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYRELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + D+    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSDEDKLIVHRARRIQFFLSQN 413


>gi|238925243|ref|YP_002938760.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
 gi|238876919|gb|ACR76626.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
          Length = 463

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 171/329 (51%), Gaps = 20/329 (6%)

Query: 102 CGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157
            GR+ N LG+ IDG    D+  K ++  E     PP    Q   E+  +TGI+VID+  P
Sbjct: 85  LGRLFNVLGEAIDGGAQPDTEEKWEIHRE-----PPTFEEQNPAEEILETGIKVIDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDN 213
              G +IG+F G+G+GK+ L+     +   +     I + VGER RE  + + E      
Sbjct: 140 YAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGV 199

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           L+K+ +V    +E P  R     T +T+AEYF   K  NVLL +D+I RF  +  E++  
Sbjct: 200 LEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSAL 259

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + L
Sbjct: 260 LGRMPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHL 317

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  
Sbjct: 318 DATTVLSRKIVEQGIYPAVDPLESTSRILEPDIVGEEHYQVARKVQEILQKYKELQDIIA 377

Query: 392 IGGYRPGVDLILDKA-VHQVPIIYDFLKQ 419
           I G     D   DK  V++   I  FL Q
Sbjct: 378 ILGMEELAD--EDKVLVYRARKIQKFLSQ 404


>gi|29377093|ref|NP_816247.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis V583]
 gi|227519707|ref|ZP_03949756.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX0104]
 gi|227554103|ref|ZP_03984150.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis HH22]
 gi|229545024|ref|ZP_04433749.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX1322]
 gi|229549268|ref|ZP_04437993.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis ATCC
           29200]
 gi|255971980|ref|ZP_05422566.1| ATP synthase F1 [Enterococcus faecalis T1]
 gi|255975037|ref|ZP_05425623.1| ATP synthase F1 [Enterococcus faecalis T2]
 gi|256616880|ref|ZP_05473726.1| ATP synthase F1 [Enterococcus faecalis ATCC 4200]
 gi|256763246|ref|ZP_05503826.1| ATP synthase F1 [Enterococcus faecalis T3]
 gi|256853919|ref|ZP_05559284.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T8]
 gi|256957847|ref|ZP_05562018.1| ATP synthase F1 [Enterococcus faecalis DS5]
 gi|256961154|ref|ZP_05565325.1| ATP synthase F1 [Enterococcus faecalis Merz96]
 gi|256963727|ref|ZP_05567898.1| ATP synthase F1 [Enterococcus faecalis HIP11704]
 gi|257079785|ref|ZP_05574146.1| ATP synthase F1 [Enterococcus faecalis JH1]
 gi|257081869|ref|ZP_05576230.1| ATP synthase F1 [Enterococcus faecalis E1Sol]
 gi|257084411|ref|ZP_05578772.1| ATP synthase F1 [Enterococcus faecalis Fly1]
 gi|257087590|ref|ZP_05581951.1| ATP synthase F1 [Enterococcus faecalis D6]
 gi|257090749|ref|ZP_05585110.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis CH188]
 gi|257416797|ref|ZP_05593791.1| ATP synthase F1 [Enterococcus faecalis AR01/DG]
 gi|257420013|ref|ZP_05597007.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T11]
 gi|257421808|ref|ZP_05598798.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis X98]
 gi|293384100|ref|ZP_06629994.1| ATP synthase F1, beta subunit [Enterococcus faecalis R712]
 gi|293386915|ref|ZP_06631484.1| ATP synthase F1, beta subunit [Enterococcus faecalis S613]
 gi|294781392|ref|ZP_06746734.1| ATP synthase F1, beta subunit [Enterococcus faecalis PC1.1]
 gi|300860935|ref|ZP_07107022.1| ATP synthase F1, beta subunit [Enterococcus faecalis TUSoD Ef11]
 gi|307270676|ref|ZP_07551967.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4248]
 gi|307271674|ref|ZP_07552945.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0855]
 gi|307276856|ref|ZP_07557967.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2134]
 gi|307285546|ref|ZP_07565685.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0860]
 gi|307287567|ref|ZP_07567610.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0109]
 gi|307290378|ref|ZP_07570293.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0411]
 gi|312899982|ref|ZP_07759300.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0470]
 gi|312902379|ref|ZP_07761585.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0635]
 gi|312907949|ref|ZP_07766932.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 512]
 gi|312953639|ref|ZP_07772476.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0102]
 gi|312978523|ref|ZP_07790261.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 516]
 gi|81436390|sp|Q831A5|ATPB_ENTFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|29344559|gb|AAO82317.1| ATP synthase F1, beta subunit [Enterococcus faecalis V583]
 gi|227072795|gb|EEI10758.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX0104]
 gi|227176729|gb|EEI57701.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis HH22]
 gi|229305505|gb|EEN71501.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis ATCC
           29200]
 gi|229309916|gb|EEN75903.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX1322]
 gi|255962998|gb|EET95474.1| ATP synthase F1 [Enterococcus faecalis T1]
 gi|255967909|gb|EET98531.1| ATP synthase F1 [Enterococcus faecalis T2]
 gi|256596407|gb|EEU15583.1| ATP synthase F1 [Enterococcus faecalis ATCC 4200]
 gi|256684497|gb|EEU24192.1| ATP synthase F1 [Enterococcus faecalis T3]
 gi|256710862|gb|EEU25905.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T8]
 gi|256948343|gb|EEU64975.1| ATP synthase F1 [Enterococcus faecalis DS5]
 gi|256951650|gb|EEU68282.1| ATP synthase F1 [Enterococcus faecalis Merz96]
 gi|256954223|gb|EEU70855.1| ATP synthase F1 [Enterococcus faecalis HIP11704]
 gi|256987815|gb|EEU75117.1| ATP synthase F1 [Enterococcus faecalis JH1]
 gi|256989899|gb|EEU77201.1| ATP synthase F1 [Enterococcus faecalis E1Sol]
 gi|256992441|gb|EEU79743.1| ATP synthase F1 [Enterococcus faecalis Fly1]
 gi|256995620|gb|EEU82922.1| ATP synthase F1 [Enterococcus faecalis D6]
 gi|256999561|gb|EEU86081.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis CH188]
 gi|257158625|gb|EEU88585.1| ATP synthase F1 [Enterococcus faecalis ARO1/DG]
 gi|257161841|gb|EEU91801.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T11]
 gi|257163632|gb|EEU93592.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis X98]
 gi|291078580|gb|EFE15944.1| ATP synthase F1, beta subunit [Enterococcus faecalis R712]
 gi|291083585|gb|EFE20548.1| ATP synthase F1, beta subunit [Enterococcus faecalis S613]
 gi|294451519|gb|EFG19979.1| ATP synthase F1, beta subunit [Enterococcus faecalis PC1.1]
 gi|295113588|emb|CBL32225.1| ATP synthase F1 subcomplex beta subunit [Enterococcus sp. 7L76]
 gi|300849974|gb|EFK77724.1| ATP synthase F1, beta subunit [Enterococcus faecalis TUSoD Ef11]
 gi|306498571|gb|EFM68073.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0411]
 gi|306501305|gb|EFM70608.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0109]
 gi|306502770|gb|EFM72035.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0860]
 gi|306506493|gb|EFM75652.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2134]
 gi|306511552|gb|EFM80551.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0855]
 gi|306512986|gb|EFM81627.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4248]
 gi|310626040|gb|EFQ09323.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 512]
 gi|310628477|gb|EFQ11760.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0102]
 gi|310634049|gb|EFQ17332.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0635]
 gi|311288672|gb|EFQ67228.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 516]
 gi|311292978|gb|EFQ71534.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0470]
 gi|315025252|gb|EFT37184.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2137]
 gi|315030335|gb|EFT42267.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4000]
 gi|315032741|gb|EFT44673.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0017]
 gi|315035801|gb|EFT47733.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0027]
 gi|315143760|gb|EFT87776.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2141]
 gi|315148583|gb|EFT92599.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4244]
 gi|315150008|gb|EFT94024.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0012]
 gi|315151906|gb|EFT95922.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0031]
 gi|315155490|gb|EFT99506.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0043]
 gi|315159213|gb|EFU03230.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0312]
 gi|315162848|gb|EFU06865.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0645]
 gi|315164964|gb|EFU08981.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1302]
 gi|315168599|gb|EFU12616.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1341]
 gi|315170142|gb|EFU14159.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1342]
 gi|315173359|gb|EFU17376.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1346]
 gi|315576212|gb|EFU88403.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0309B]
 gi|315579211|gb|EFU91402.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0630]
 gi|315582928|gb|EFU95119.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0309A]
 gi|323481544|gb|ADX80983.1| ATP synthase F1, beta subunit [Enterococcus faecalis 62]
 gi|327535839|gb|AEA94673.1| ATP synthase F1 sector beta subunit [Enterococcus faecalis OG1RF]
          Length = 468

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFPADAERSGIHKKAPAFDELSTSNEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +    +  ++ + + H++ R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYEVATEVQHILQRYRELQDIIAILG 385


>gi|289449740|ref|YP_003475404.1| ATP synthase F1 subunit beta [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184287|gb|ADC90712.1| ATP synthase F1, beta subunit [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 466

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  IDG+  L        I    P    ++   +  +TGI+VID+  P   G 
Sbjct: 88  GRMFNVLGNTIDGEGDLPPETPQSPIHRTAPGFAEQKPAAEILETGIKVIDLLEPYPKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLK-KSV 218
           +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +     +  K+ 
Sbjct: 148 KIGLFGGAGVGKTVLIQELIHNVAMEHGGYSVFTGVGERSREGNDLWNEMRESGVSDKTA 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +ESP +R    L  +T+AE+F      +VLL +D+I RF  +  E++T  G +P
Sbjct: 208 LVFGQMNESPGVRMRVALAGLTMAEHFRDVDHKDVLLFIDNIFRFVQAGSEVSTLLGRMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +    G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 268 SAVGYQPTLAEEMGALQERI--TSTRDGSVTSVQAVYVPADDLTDPAPATTFTHLDATTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +AE+G YP VDPLAS SR+ + A   DE  ++   +  ++ +++E +DI  I G
Sbjct: 326 LSRQIAEQGIYPAVDPLASTSRILEPAVVGDEHYRVARKVQEILQKYKELQDIIAILG 383


>gi|254458956|ref|ZP_05072379.1| ATP synthase F1, beta subunit [Campylobacterales bacterium GD 1]
 gi|207084227|gb|EDZ61516.1| ATP synthase F1, beta subunit [Campylobacterales bacterium GD 1]
          Length = 469

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG + +     +  I    PP +++    + F+TGI+V+D+  P   G 
Sbjct: 92  GRIFNVIGETIDGGEQVTDSP-TWSIHRAPPPLVDQSTTTEMFETGIKVVDLLAPYSKGG 150

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+ ++     +       +S+   VGER RE  +   +    N L K  
Sbjct: 151 KVGLFGGAGVGKTVIIMELIHNVAMGHDGLSVFAGVGERTREGNDLYHEMKDSNVLDKVA 210

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           +      E P  R    LT +T+AEYF  + + +VL+ +D+I RFA S  E++   G +P
Sbjct: 211 LCYGQMSEPPGARNRIALTGLTMAEYFRDEMNLDVLMFVDNIFRFAQSGSEMSALLGRIP 270

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L +RI  +  + G+IT+V +V V  D+  DP   SV + LD   V
Sbjct: 271 SAVGYQPTLAREMGALQDRI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATTV 328

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           LNR +AE+G YP VDPL S SRL D     +E   V+  +   + ++++ +DI  I G
Sbjct: 329 LNRKIAEKGIYPAVDPLDSTSRLLDPQIIGEEHYSVARGVQQTLQKYKDLQDIIAILG 386


>gi|146318826|ref|YP_001198538.1| F0F1 ATP synthase subunit beta [Streptococcus suis 05ZYH33]
 gi|146321035|ref|YP_001200746.1| F0F1 ATP synthase subunit beta [Streptococcus suis 98HAH33]
 gi|145689632|gb|ABP90138.1| F0F1-type ATP synthase, beta subunit [Streptococcus suis 05ZYH33]
 gi|145691841|gb|ABP92346.1| F0F1-type ATP synthase, beta subunit [Streptococcus suis 98HAH33]
 gi|292558487|gb|ADE31488.1| ATP synthase F1, beta subunit [Streptococcus suis GZ1]
          Length = 481

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG  ID ++S    D   E + K  PA +         +TGI+VID+  P   
Sbjct: 102 LGRVFNVLGDTIDLEESF-PADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 160

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K
Sbjct: 161 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 221 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 281 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L + G YP VDPLAS SR LA +    +   +   +  ++ R++E +DI  I G
Sbjct: 339 TNLERKLTQLGIYPAVDPLASSSRALAPQIVGEEHYAVAMEVKRVLQRYQELQDIIAILG 398


>gi|313885528|ref|ZP_07819278.1| ATP synthase F1, beta subunit [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619258|gb|EFR30697.1| ATP synthase F1, beta subunit [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 457

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID      +G     I ++ P   ++Q   + F+TGI+VID+  P   G 
Sbjct: 85  GRMFNVLGNVIDEMPFEEEGQRE-PIHNEAPAFADQQTSTQIFETGIKVIDLLCPYPQGG 143

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +   ++    +++ VGER RE  + + E      L ++V
Sbjct: 144 KIGLFGGAGVGKTVLMQELIHNTAIEQGGLSVVAGVGERTREGNDLYYEMKEAGVLDQTV 203

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   K  NVLL +D+I RF  +  E++   G +P
Sbjct: 204 LVYGQMDEPPGARMRVALSALTMAEYFRDKKKQNVLLFIDNIFRFIQAGSEVSALLGRMP 263

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+ +L ERI  +  + G IT++ ++ V  D+  DP A    S LD   V
Sbjct: 264 SAVGYQPTLANEMGQLQERI--TSTQDGAITSIQAIFVPADDLTDPAAAIAFSHLDARTV 321

Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S S  L++     +   +   +  ++ R+ E +DI  I G
Sbjct: 322 LSRQIASLGIYPAVDPLESTSSLLSEDIVGVEHADVAHRVQQILQRYNELQDIIAILG 379


>gi|148927462|ref|ZP_01810965.1| ATP synthase F1, beta subunit [candidate division TM7 genomosp.
           GTL1]
 gi|147887186|gb|EDK72653.1| ATP synthase F1, beta subunit [candidate division TM7 genomosp.
           GTL1]
          Length = 460

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 12/299 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N +G+PIDG  ++ K +  +  + K PPA   Q  +    +TGI+VID+  P+  G
Sbjct: 91  GRMFNVVGEPIDGK-AISK-NAHVAPIHKEPPAFTDQSGKTEILETGIKVIDLIAPIAKG 148

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+ L+    S  A+      V    VGER RE  +  E+      L K
Sbjct: 149 GKVGLFGGAGVGKTVLIQELISNIAKFHSGSSVFAG-VGERTREGNDLYEEMXASGVLDK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +V    +E P  R    L+ + +AE F  +G +VLL +D+I RF  +  E++   G L
Sbjct: 208 TSLVFGQMNEPPGARLRVALSGLAMAEAFRDEGKDVLLFIDNIFRFTQAGSEVSALLGRL 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  +KG++T+V +V V  D+  DP   +  + LD  I
Sbjct: 268 PSAVGYQPNLQQEMGALQERI--TSTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDSTI 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR+L E G YP VDPL S S + D      E  ++   +  ++ +++E +DI  I G
Sbjct: 326 VLNRALTEIGIYPAVDPLDSSSTILDAEIVGQEHYEVAREVQRVLQQYKELQDIIAILG 384


>gi|320102102|ref|YP_004177693.1| ATP synthase F1 subcomplex subunit beta [Isosphaera pallida ATCC
           43644]
 gi|319749384|gb|ADV61144.1| ATP synthase F1 subcomplex beta subunit [Isosphaera pallida ATCC
           43644]
          Length = 479

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/336 (34%), Positives = 172/336 (51%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG PIDG   +   +    I    P         + F+TGI+VID+ TP   G 
Sbjct: 94  GRVFNLLGDPIDGRGPVNVSE-RWRIHRHAPDFDKLSPKTEVFETGIKVIDLLTPFVRGG 152

Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDKV-----IISLVGERGREVR----EFIEDYLGD 212
           +IG+F G+G+GK+ +L  + AR     KV     + + VGER RE      E  E  +G 
Sbjct: 153 KIGLFGGAGLGKTVILQELIAR---IAKVHSGFSVFAGVGERTREGNDLWLEMQETKIGA 209

Query: 213 NLKK----SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
             K     +V+     +E P  R    L+A+T AE+F  S G +VLL +D+I RF+ +  
Sbjct: 210 TGKSVIDSTVMYFGQMNEPPGARLRVALSALTSAEWFRDSTGADVLLFIDNIFRFSQAGS 269

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P   GY  ++ +E+  L ERI  +    G IT+V +V V  D+  DP   +
Sbjct: 270 EVSALLGRMPSNVGYQPTLATEMGALQERI--TSTVNGAITSVQAVYVPADDLTDPAPAT 327

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
               LD  IVL RS+AE+G YP +DPL S SR+ D  +  +E  ++   +  ++ R+ E 
Sbjct: 328 TFGFLDAFIVLQRSIAEKGIYPAIDPLGSSSRILDPQYVGEEHYEVARRVQSILQRYREL 387

Query: 387 RDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           RDI  I     GVD + +   + VH+   I  FL Q
Sbjct: 388 RDIIAI----LGVDELSEEDKQIVHRARRIERFLSQ 419


>gi|291524473|emb|CBK90060.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale DSM
           17629]
 gi|291527484|emb|CBK93070.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale
           M104/1]
          Length = 463

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 171/329 (51%), Gaps = 20/329 (6%)

Query: 102 CGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157
            GR+ N LG+ IDG    D+  K ++  E     PP    Q   E+  +TGI+VID+  P
Sbjct: 85  LGRLFNVLGEAIDGGAQPDTEEKWEIHRE-----PPTFEEQNPAEEILETGIKVIDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDN 213
              G +IG+F G+G+GK+ L+     +   +     I + VGER RE  + + E      
Sbjct: 140 YAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGV 199

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           L+K+ +V    +E P  R     T +T+AEYF   K  NVLL +D+I RF  +  E++  
Sbjct: 200 LEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSAL 259

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + L
Sbjct: 260 LGRMPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHL 317

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  
Sbjct: 318 DATTVLSRKIVEQGIYPAVDPLESTSRILEPDIVGEEHYQVARKVQEILQKYKELQDIIA 377

Query: 392 IGGYRPGVDLILDKA-VHQVPIIYDFLKQ 419
           I G     D   DK  V++   I  FL Q
Sbjct: 378 ILGMEELAD--EDKVLVYRARKIQKFLSQ 404


>gi|254300966|ref|ZP_04968410.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
 gi|157811305|gb|EDO88475.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
          Length = 544

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G P D   +L        I    PP   ++     F TGI+
Sbjct: 102 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 161

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 162 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 219

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 220 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 280 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 338 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 397

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 398 YRELQDV 404


>gi|126442704|ref|YP_001063786.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 668]
 gi|190358220|sp|A3NN65|ATPB2_BURP6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|126222195|gb|ABN85700.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 668]
          Length = 534

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G P D   +L        I    PP   ++     F TGI+
Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 404 YRELQDV 410


>gi|260466814|ref|ZP_05812999.1| ATP synthase F1, beta subunit [Mesorhizobium opportunistum WSM2075]
 gi|259029426|gb|EEW30717.1| ATP synthase F1, beta subunit [Mesorhizobium opportunistum WSM2075]
          Length = 524

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 160/308 (51%), Gaps = 19/308 (6%)

Query: 101 WCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
             GR+IN +G+P+D     G  D + M  + +  P    Q  E     TGI+V+D+  P 
Sbjct: 136 MLGRIINVIGEPVD---EAGPVDAIEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPY 192

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  + 
Sbjct: 193 AKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGERTREGNDLYHEFIESGVN 252

Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
              G    K+ +V    +E P  R    LT +T+AEYF  +G +VL  +D+I RF  +  
Sbjct: 253 KKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 312

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +
Sbjct: 313 EVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPAT 370

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD    LNR++AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  
Sbjct: 371 SFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYGVARQVQSILQRYKSL 430

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 431 QDIIAILG 438


>gi|160938925|ref|ZP_02086276.1| hypothetical protein CLOBOL_03819 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437888|gb|EDP15648.1| hypothetical protein CLOBOL_03819 [Clostridium bolteae ATCC
           BAA-613]
          Length = 466

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ IDG +SL   D    ++ + PP+   Q  V +  +TGI+VID+  P   G
Sbjct: 86  GRLFNVLGETIDGGESLEGED--KWVIHRDPPSFEDQSPVVEMLETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  + + E      L+K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSIFTGVGERSREGNDLWTEMRESGVLEKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVEHQNVLLFIDNIFRFVQAGSEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEVGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ ++     E  ++ + +  ++ +++E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLESTSRILEEDVVGKEHYEVANKVQQMLQKYKELQDIIAILG 380


>gi|170017975|ref|YP_001728894.1| ATP synthase F1, beta subunit [Leuconostoc citreum KM20]
 gi|226740651|sp|B1MW85|ATPB_LEUCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169804832|gb|ACA83450.1| ATP synthase F1, beta subunit [Leuconostoc citreum KM20]
          Length = 466

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 154/296 (52%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+D +  +        I    P   +     +  +TGI+VID+  P  
Sbjct: 85  ATLGRVFNVLGEPVDNNGEIAAETPRHSIHRDAPSYDDLANSTEILETGIKVIDLLAPYV 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      LK
Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAESGVLK 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AE F  S+G +VLL +D+I RF  +  E++   G
Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDSEGKDVLLFIDNIFRFTQAGSEVSALLG 264

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
              L R+L ++G YP VDPLAS S   D      E  ++ + +   + R+ E +DI
Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQVVGQEHYEVATEVQRTLQRYRELQDI 378


>gi|299136422|ref|ZP_07029605.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX8]
 gi|298600937|gb|EFI57092.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX8]
          Length = 480

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GRV+N LG+P+D    LG       M I  + P    +   E+ F+TGI+V+D+  P  
Sbjct: 93  LGRVLNVLGEPVD---ELGPVNAKTHMPIHRQAPAFDEQSTSEEMFETGIKVVDLILPFL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ ++     +         + + VGER RE      EF E  + D
Sbjct: 150 KGGKIGLFGGAGVGKTVVIQELINNVAMKHGGFSVFAGVGERTREGNDLWHEFQESGVID 209

Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
               N  K+ ++     E P  R    LT +T+AEYF   +G + LL +D+I RF  +  
Sbjct: 210 VHDFNKSKAALIYGQMTEPPGARLRVALTGLTVAEYFRDVEGADTLLFIDNIFRFTQAGS 269

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++T  G +P A GY  ++ +E+  L ERI  +  +KG++T+V +V V  D+  DP   +
Sbjct: 270 EVSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKKGSVTSVQAVYVPADDITDPAPAT 327

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD  ++L+R L+E G YP VDPL S SR L+ +    +   +   +  ++ R+++ 
Sbjct: 328 TFAHLDATMLLSRPLSELGIYPAVDPLTSTSRVLSARVVGQEHYDVAQGVKRILQRYKDL 387

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 388 QDIIAILG 395


>gi|332980984|ref|YP_004462425.1| ATP synthase F1 subcomplex subunit beta [Mahella australiensis 50-1
           BON]
 gi|332698662|gb|AEE95603.1| ATP synthase F1 subcomplex beta subunit [Mahella australiensis 50-1
           BON]
          Length = 472

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID    +   D  M I  + P    +Q V + F+TGI+V+D+  P   G
Sbjct: 91  LGRLFNVLGQPIDDSGDVEATDY-MPIHREAPAFSEQQPVSQVFETGIKVVDLLAPYPRG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  E   +      L K+
Sbjct: 150 GKIGLFGGAGVGKTVLIMELIHNIATEHGGFSIFTGVGERTREGNELWNEMKESGVLDKT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +  +VL+ +D+I R+  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEHQDVLMFIDNIFRYVQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  ++  L ERI  +  + G+IT+V +V V  D+  DP   ++ + LD   
Sbjct: 270 PSAVGYQPTLAQDVGSLEERI--TSTKSGSITSVQAVYVPADDLTDPAPAAIFAHLDAMT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E G YP VDPL+S SR+ D     +E       +  ++ R++E +DI  I G
Sbjct: 328 VLSRDIVEMGIYPAVDPLSSTSRILDARILGEEHYNTARHVQEILERYKELQDIIAILG 386


>gi|134278178|ref|ZP_01764892.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
 gi|134249962|gb|EBA50042.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
          Length = 536

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G P D   +L        I    PP   ++     F TGI+
Sbjct: 102 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 161

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 162 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 219

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 220 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 280 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 338 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 397

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 398 YRELQDV 404


>gi|70725933|ref|YP_252847.1| F0F1 ATP synthase subunit beta [Staphylococcus haemolyticus
           JCSC1435]
 gi|118573757|sp|Q4L7Y4|ATPB_STAHJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|68446657|dbj|BAE04241.1| ATP synthase beta chain [Staphylococcus haemolyticus JCSC1435]
          Length = 470

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 161/302 (53%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG  ID +D L  G +  + + +  P  +    E +  +TGI+V+D+  P 
Sbjct: 87  VTLGRVFNVLGDTIDLEDKL-DGSVRRDPIHRQSPNFDELSTEVEILETGIKVVDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +
Sbjct: 146 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMRDSGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR  + A    E  ++   +   + ++ E +DI  I
Sbjct: 324 ATTNLERKLTEMGIYPAVDPLASTSRALEPAIVGQEHYEVARDVQSTLQKYRELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|116750008|ref|YP_846695.1| F0F1 ATP synthase subunit beta [Syntrophobacter fumaroxidans MPOB]
 gi|166222421|sp|A0LLF8|ATPB_SYNFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116699072|gb|ABK18260.1| ATP synthase F1, beta subunit [Syntrophobacter fumaroxidans MPOB]
          Length = 469

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 9/303 (2%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            A   GRVIN +G+ +DG   +   D  M I    P    +    K  +TG++VID+  P
Sbjct: 86  GAAVLGRVINVVGRTVDGLGPVNT-DTYMPIHRTAPAFTEQDTSVKVLETGVKVIDLLVP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+ ++     +       IS+   VGER RE  +   +      
Sbjct: 145 FPRGGKMGMFGGAGVGKTVVMMEMIHNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGV 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           L ++ +V     E P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++  
Sbjct: 205 LPRAGLVYGQMTEPPGARARVALSALTVAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ ++L  L ERI  +   KG+IT+V  V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLGTDLGELQERI--TSTTKGSITSVQCVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           DG +VL+R +AE G YP VDPL S SR+ D      D       +  ++ ++++ +DI  
Sbjct: 323 DGTVVLSRQIAELGIYPAVDPLDSTSRILDPNVLGEDHYYTAREVQQILQKYKDLQDIIA 382

Query: 392 IGG 394
           I G
Sbjct: 383 ILG 385


>gi|167923972|ref|ZP_02511063.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BCC215]
          Length = 417

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 154/295 (52%), Gaps = 12/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  G P D   +L        I    PP   ++     F TGI+VID+  PL  G 
Sbjct: 3   GRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGG 62

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           +  +F G+G+GK+ L+     +M  R       + + +GER RE  E + D  G   L +
Sbjct: 63  KAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGR 120

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   G 
Sbjct: 121 TVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGR 180

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D  
Sbjct: 181 LPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSM 238

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  + E +D+
Sbjct: 239 VVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 293


>gi|225619150|ref|YP_002720376.1| F0F1 ATP synthase subunit beta [Brachyspira hyodysenteriae WA1]
 gi|225213969|gb|ACN82703.1| F0F1 ATP synthase subunit beta [Brachyspira hyodysenteriae WA1]
          Length = 470

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 169/321 (52%), Gaps = 10/321 (3%)

Query: 81  ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           IS GD +F  G   + P      GR+ N LG+ +D  + +   +    I +  P   N +
Sbjct: 70  ISRGDDIFDTGNHIMVPVGTETIGRIFNVLGQTVDKGEPIVAKEYR-SIHASPPKFENLE 128

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVG 196
              + F+TGI+VID+  P   G + G+F G+G+GK+ L+        S+     + + VG
Sbjct: 129 PKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIASEHGGYSVFAGVG 188

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
           ER RE  +   +      + K+ +V    +E P  R    L+A+T+AEYF  S G +VLL
Sbjct: 189 ERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALSALTMAEYFRDSAGLDVLL 248

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V 
Sbjct: 249 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKNGSITSIQAVY 306

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R ++E+G YP VDPLAS SR+ D      E   V+
Sbjct: 307 VPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILDPNILGQEHYDVA 366

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             + H++ R+ + +DI  I G
Sbjct: 367 RKVQHILQRYRDLQDIIAILG 387


>gi|198284879|ref|YP_002221200.1| ATP synthase F1 subunit beta [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665303|ref|YP_002427559.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198249400|gb|ACH84993.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517516|gb|ACK78102.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 469

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 89  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 146

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 147 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 206

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 207 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 325 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|190358296|sp|Q63IW3|ATPB2_BURPS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
          Length = 538

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G P D   +L        I    PP   ++     F TGI+
Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 404 YRELQDV 410


>gi|728923|sp|P41168|ATPB_THIFE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154674|gb|AAA53127.1| F1F0-ATPase beta subunit [Acidithiobacillus ferrooxidans]
          Length = 468

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 88  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 146 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 206 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYPLAGTEVSALLG 265

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 266 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 323

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 324 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 383

Query: 394 G 394
           G
Sbjct: 384 G 384


>gi|152977492|ref|YP_001377009.1| F0F1 ATP synthase subunit beta [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189081327|sp|A7GV56|ATPB_BACCN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|152026244|gb|ABS24014.1| ATP synthase F1, beta subunit [Bacillus cytotoxicus NVH 391-98]
          Length = 464

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 179/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG+ ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 83  ATLGRVFNVLGEAIDLDGEI-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 141 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 199

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 200 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 259

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 260 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 317

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 318 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 377

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 378 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 406


>gi|315641266|ref|ZP_07896343.1| ATP synthase F1 sector beta subunit [Enterococcus italicus DSM
           15952]
 gi|315483033|gb|EFU73552.1| ATP synthase F1 sector beta subunit [Enterococcus italicus DSM
           15952]
          Length = 468

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID  +   K      I    P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLQEPFPKDAQRSGIHKPAPNFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYNEMRESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +       ++ + + H + R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEQHYQVATEVQHTLQRYRELQDIIAILG 385


>gi|297585419|ref|YP_003701199.1| ATP synthase F1 subunit beta [Bacillus selenitireducens MLS10]
 gi|297143876|gb|ADI00634.1| ATP synthase F1, beta subunit [Bacillus selenitireducens MLS10]
          Length = 472

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID  + + +G+    I  + P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRVFNVLGQEIDLQEPIPEGERRDPIHRQAPAYDDLSTNTEILETGIKVVDLLAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVITKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 212 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEKGADVLLFIDNIFRFTQAGMEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 272 PSAVGYQPTLSTEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            L R L+E G YP VDPLAS SR        DE   V+  +   + +++E +DI  I G
Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSPEIVGDEHYSVAREVQETLQKYKELQDIIAILG 388


>gi|308238029|emb|CBK55605.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 419

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 64  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 G 394
           G
Sbjct: 360 G 360


>gi|308238027|emb|CBK55604.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
 gi|308238037|emb|CBK55609.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 421

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 64  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 G 394
           G
Sbjct: 360 G 360


>gi|319790625|ref|YP_004152258.1| ATP synthase F1, beta subunit [Thermovibrio ammonificans HB-1]
 gi|317115127|gb|ADU97617.1| ATP synthase F1, beta subunit [Thermovibrio ammonificans HB-1]
          Length = 481

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 162/302 (53%), Gaps = 17/302 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR+ N +GKPIDG     KG +  E    I    PP   ++ V + F+TGI+VID+  P 
Sbjct: 98  GRIFNVVGKPIDG-----KGPVEAEEYWPIHRPAPPLTEQKTVAEVFETGIKVIDLLEPY 152

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNL 214
             G + G+F G+G+GK+ LL     +         + + VGER RE  + ++E      L
Sbjct: 153 AKGGKTGLFGGAGVGKTVLLMELIHNVAMKHGGFSVFAGVGERTREGTDLWLEMQESGVL 212

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
           + +V+V    +E P  R    +T VT+AEYF   +G +++  +D++ RF  +  E++   
Sbjct: 213 ENTVLVYGQMNEPPGNRWRVAMTGVTMAEYFRDVEGRDMMFFVDNMFRFIQAGAEVSALL 272

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P   GY  ++ +E+  + ERI  +   KG+IT+V ++ V  D+  DP   ++ + LD
Sbjct: 273 GRIPSEVGYQPTLATEVGAIQERI--TSTTKGSITSVQAIYVPADDFTDPAPFTLFAHLD 330

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+R+LAE+G YP VDPL S SR+ D     +   ++   +   + R++E  +I  I
Sbjct: 331 ATTVLSRALAEQGIYPAVDPLESTSRMLDPHIVGERHYRVAREVQRYLQRYKELLEIIAI 390

Query: 393 GG 394
            G
Sbjct: 391 LG 392


>gi|91780119|ref|YP_555326.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400]
 gi|123357676|sp|Q13IW3|ATPB3_BURXL RecName: Full=ATP synthase subunit beta 3; AltName: Full=ATP
           synthase F1 sector subunit beta 3; AltName:
           Full=F-ATPase subunit beta 3
 gi|91692779|gb|ABE35976.1| ATP synthase F1, beta subunit [Burkholderia xenovorans LB400]
          Length = 493

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 160/310 (51%), Gaps = 13/310 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+I+  G P D    L  G     I  K PP  ++    + F TGI+VID+ TPL 
Sbjct: 102 AMLGRLIDVSGVPGDNGTPLPPGTPRRPIHRKPPPLASQGAETRIFATGIKVIDLLTPLA 161

Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
            G +  +F G+G+GK+ L+     +M  R       + + VGER RE  E + D      
Sbjct: 162 QGGKAAMFGGAGVGKTVLVMELIHAMVERYQGIS--VFAGVGERCREGHEMLTDMRHSGV 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           L ++V+V    +E P  R   PLTA+T+AEYF   +  NVLL++D++ RF  +  E++  
Sbjct: 220 LPRTVLVYGQMNEPPGARWRVPLTALTVAEYFRDERHQNVLLLMDNVFRFVQAGAEVSGL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G LP   GY  ++ +E+  L ERI        ++TA+ +V V  D+  DP   ++ + +
Sbjct: 280 LGRLPSRVGYQPTLATEVAGLQERI--VSVGDVSVTAIEAVYVPADDFTDPAVTAIAAHV 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRD-IR 390
           D  +VL+RS+A EG YP +DP+AS S L D      +  ++   +   +  + E +D I 
Sbjct: 338 DSMVVLSRSMAAEGMYPAIDPIASSSVLLDPLVVGGEHARIAIEVRRAVEHYRELQDVIS 397

Query: 391 LIGGYRPGVD 400
           L+G    G D
Sbjct: 398 LLGVEELGAD 407


>gi|226226122|ref|YP_002760228.1| ATP synthase beta chain [Gemmatimonas aurantiaca T-27]
 gi|226089313|dbj|BAH37758.1| ATP synthase beta chain [Gemmatimonas aurantiaca T-27]
          Length = 476

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 159/302 (52%), Gaps = 8/302 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR++N LG+P+D    +        I  K P  +N +   + F+TGI+V+D+  P 
Sbjct: 94  APALGRILNVLGEPVDDGAPIPATAERWPIHRKRPDFVNLEPKTEVFETGIKVVDLVAPF 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ ++     +       K +   VGER RE  + ++E      L
Sbjct: 154 VKGGKIGLFGGAGVGKTVIIQELINNVAKGHGGKSVFCGVGERTREGNDLYLEFQEAGIL 213

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273
            K  ++    +E P  R    L  +T+AEYF  + + +VL+ +D+I RF  +  E++   
Sbjct: 214 DKVALIYGQMNEPPGARLRVALAGLTVAEYFRDQENADVLVFVDNIFRFTQAGSEVSALL 273

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +    G+IT+V ++ V  D+  DP   +  + LD
Sbjct: 274 GRMPSAVGYQPTLATEMGELQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLD 331

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRLI 392
             + LNR + E G YP VDPL S SR+ D  +  D    V++ T  ++ R++E +DI  I
Sbjct: 332 ATVTLNRKITELGIYPAVDPLDSGSRILDAQYVGDRHYNVATQTKQILQRYKELQDIIAI 391

Query: 393 GG 394
            G
Sbjct: 392 LG 393


>gi|296876800|ref|ZP_06900848.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432302|gb|EFH18101.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 15912]
          Length = 468

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D    +      I  K P        E+  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDQPFAEDAPRDSIHKKAPSFDELSTSEEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V+S +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVASEVKRVLQRYHELQDIIAILG 385


>gi|237508230|ref|ZP_04520945.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346]
 gi|235000435|gb|EEP49859.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346]
          Length = 538

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G P D   +L        I    PP   ++     F TGI+
Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 404 YRELQDV 410


>gi|167628982|ref|YP_001679481.1| ATP synthase f1, beta subunit [Heliobacterium modesticaldum Ice1]
 gi|254808154|sp|B0THN2|ATPB_HELMI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167591722|gb|ABZ83470.1| ATP synthase f1, beta subunit [Heliobacterium modesticaldum Ice1]
          Length = 471

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 161/302 (53%), Gaps = 9/302 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+ N LG PID    +   ++   I  K P   N +   +  +TGI+VID+  P 
Sbjct: 91  AEILGRMFNVLGDPIDEAGQVAAKEV-WPIHRKAPTFENLEPSTEVLETGIKVIDLLAPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNLK 215
             G ++G+F G+G+GK+ L+     +   +     + + VGER RE  +   ++    + 
Sbjct: 150 AKGGKVGLFGGAGVGKTVLIQELINNIAMEYSGYSVFAGVGERTREGNDLYNEFKESGIL 209

Query: 216 KSVVVV-ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
           K+V +V    +E P  R    L+ + +AEYF   +  +VLL +D+I RF  +  E++   
Sbjct: 210 KNVAMVFGQMNEPPGARMRVALSGLVMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALL 269

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD
Sbjct: 270 GRMPSAVGYQPTLSTEMGQLQERI--TSTKNGSITSVQAIYVPADDLTDPAPATAFAHLD 327

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
              VL+R++AE G YP VDPL S SR+ D     DE   V+  +  ++ R++E +DI  I
Sbjct: 328 ATTVLSRAIAELGIYPAVDPLDSTSRILDPHVVGDEHYSVARGVQKILQRYKELQDIIAI 387

Query: 393 GG 394
            G
Sbjct: 388 LG 389


>gi|312867283|ref|ZP_07727493.1| ATP synthase F1, beta subunit [Streptococcus parasanguinis F0405]
 gi|322389187|ref|ZP_08062748.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 903]
 gi|311097412|gb|EFQ55646.1| ATP synthase F1, beta subunit [Streptococcus parasanguinis F0405]
 gi|321144092|gb|EFX39509.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 903]
          Length = 468

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D    +      I  K P        E+  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDQPFAEDAPRDSIHKKAPSFDELSTSEEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + S +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVASEVKRVLQRYHELQDIIAILG 385


>gi|308238031|emb|CBK55606.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 419

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 64  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 G 394
           G
Sbjct: 360 G 360


>gi|308238142|emb|CBK55610.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 420

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 64  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 G 394
           G
Sbjct: 360 G 360


>gi|308238035|emb|CBK55608.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
 gi|308238041|emb|CBK55611.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 419

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 64  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 G 394
           G
Sbjct: 360 G 360


>gi|15828737|ref|NP_326097.1| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP]
 gi|81855822|sp|Q98QU5|ATPB1_MYCPU RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|14089679|emb|CAC13439.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis]
          Length = 475

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 158/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+ ID    +   +    I +  P    +    +  +TGI+VID+  P   G +
Sbjct: 90  RMFNVLGQTIDNKGEIEAKEFR-SIHASAPSYEEQNDSSEILETGIKVIDLLVPYSKGGK 148

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  +   + +    L K+ +
Sbjct: 149 IGLFGGAGVGKTVLVQELINNIATQHGGLSVFAGVGERTREGNDLYHEMIASGVLDKTTL 208

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +P 
Sbjct: 209 VFGQMNEPPGARMRVALTGLTMAEYFRDKFKQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 269 AVGYQPTLATEMGQLQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            R++A  G YP +DPLAS SR+ D     +E  LV+  + +++ RF+E +DI  I G
Sbjct: 327 ERNIAALGIYPAIDPLASSSRMLDPLIIGNEHYLVALEVQNILQRFKELQDIIAILG 383


>gi|308238043|emb|CBK55612.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 424

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 64  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 G 394
           G
Sbjct: 360 G 360


>gi|75674631|ref|YP_317052.1| F0F1 ATP synthase subunit beta [Nitrobacter winogradskyi Nb-255]
 gi|118573709|sp|Q3SVJ1|ATPB_NITWN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|74419501|gb|ABA03700.1| ATP synthase F1 subcomplex beta subunit [Nitrobacter winogradskyi
           Nb-255]
          Length = 476

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 162/313 (51%), Gaps = 15/313 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+   A   GR++N +G+P+D    +   DL   I ++ P   ++    +   TGI+V+D
Sbjct: 81  RVPVGAGTLGRIMNVIGEPVDEQGPVKADDLR-PIHAEAPSYTDQSTEAEILVTGIKVVD 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      EFI
Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199

Query: 207 EDYL----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           E  +    G    K  +V    +E P  R    L+ +T+AE+F  +G +VL  +D+I RF
Sbjct: 200 ESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRF 259

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  D
Sbjct: 260 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTD 317

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIH 381
           P   +  + LD   VLNR+++E+G YP VDPL S SR+       +E    + L   ++ 
Sbjct: 318 PAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARLVQQVLQ 377

Query: 382 RFEETRDIRLIGG 394
           R++  +DI  I G
Sbjct: 378 RYKSLQDIIAILG 390


>gi|172058681|ref|YP_001815141.1| F0F1 ATP synthase subunit beta [Exiguobacterium sibiricum 255-15]
 gi|171991202|gb|ACB62124.1| ATP synthase F1, beta subunit [Exiguobacterium sibiricum 255-15]
          Length = 472

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 170/330 (51%), Gaps = 16/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG PID +  L      + I  K P   N     +  +TGI+V+D+  P  
Sbjct: 93  ATLGRVFNVLGNPID-EKELDASVERLPIHKKAPTFDNLSTKVEILETGIKVVDLLAPYI 151

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +K
Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLYHEMTDSGVIK 211

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R+  +  E++   G
Sbjct: 212 QTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEQGQDVLLFVDNIFRYTQAGSEVSALLG 271

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +   KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 272 RMPSAVGYQPTLATEMGMLQERI--TSTNKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 329

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + R++E +DI  I 
Sbjct: 330 TTNLERRLSEMGIYPAVDPLASTSRALSPEIVGEEHYGVARQVQETLQRYKELQDIIAI- 388

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + ++    VH+   I  FL Q+
Sbjct: 389 ---LGMDELSEEDKLTVHRARRIQFFLSQN 415


>gi|307823035|ref|ZP_07653265.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96]
 gi|307735810|gb|EFO06657.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96]
          Length = 459

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+  +   I  + P    +    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGEPIDEKGPIGE-KVKWGIHREAPSYAEQAAATELLETGIKVIDLVCPFTKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP +DPL S SR  D      E   V+  +  ++ R++E RDI  I G
Sbjct: 320 LSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEHYDVARKVQGILQRYKELRDIIAILG 377


>gi|260654862|ref|ZP_05860350.1| ATP synthase F1, beta subunit [Jonquetella anthropi E3_33 E1]
 gi|260630364|gb|EEX48558.1| ATP synthase F1, beta subunit [Jonquetella anthropi E3_33 E1]
          Length = 462

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 156/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ IDG   L   D    I    P    +    +  +TGI+VID+  P   G
Sbjct: 86  LGRLFNPLGRVIDGGPELTDAD-RWSIHRSAPKFTEQNPTAEIMETGIKVIDLLAPYTKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY-LGDNLKKS 217
            +IG+F G+G+GK+ L+     +         + + VGER RE  +   +   G  L K+
Sbjct: 145 GKIGLFGGAGVGKTVLIQELIHNVAKGHNSYSVFTGVGERTREGNDLWREMKAGGVLDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +ESP  R  A LT +T+AEYF   +  +VLL +D+I R+  +  E+++  G L
Sbjct: 205 ALVFGQMNESPGARMRAALTGLTMAEYFRDVEHQDVLLFIDNIFRYVQAGSEVSSLMGRL 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 265 PGAVGYQPTLANEMGSLQERI--TGTSAGSITSVQAVYVPADDLTDPAPATTFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E G YP VDPL S SRL +     A+  ++   +  ++ R++E +DI  I G
Sbjct: 323 VLSRRIVEMGIYPAVDPLESTSRLLEPDTVGAEHYRIARGIQEMLQRYKELQDIIAILG 381


>gi|229829780|ref|ZP_04455849.1| hypothetical protein GCWU000342_01877 [Shuttleworthia satelles DSM
           14600]
 gi|229791769|gb|EEP27883.1| hypothetical protein GCWU000342_01877 [Shuttleworthia satelles DSM
           14600]
          Length = 463

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 171/324 (52%), Gaps = 12/324 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  IDG + +  G    EI  K P   ++  V++  +TGI+VID+  P   G 
Sbjct: 86  GRLFNVLGDTIDGGEQI-TGAEEWEIHRKPPKFTDQNPVQEILETGIKVIDLIAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           ++G+F G+G+GK+ L+     +         I + VGER RE  + F E      +K + 
Sbjct: 145 KVGLFGGAGVGKTVLIQELIHNIATQHGGYSIFTGVGERSREGNDLFSEMSASGVIKNTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   +  +VLL +D+I RF  +  E+++  G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDVQHKDVLLFIDNIFRFVQAGSEVSSLLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLANEMGELQERIASTKA--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R + E+G YP VDPL S SR+ +++    D  +    +  ++ +++E +DI  I G  
Sbjct: 323 LSRKIVEQGIYPAVDPLGSSSRILEESIVGKDHYETAQRVLQVLQKYKELQDIIAILGME 382

Query: 397 PGVDLILDK-AVHQVPIIYDFLKQ 419
              D   DK  V++   + +FL Q
Sbjct: 383 ELSD--EDKLTVYRARKVRNFLSQ 404


>gi|161830152|ref|YP_001597761.1| F0F1 ATP synthase subunit beta [Coxiella burnetii RSA 331]
 gi|189081330|sp|A9NBD0|ATPB_COXBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161762019|gb|ABX77661.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 331]
          Length = 461

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 169/325 (52%), Gaps = 13/325 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +   +  + I    P  + +    +  +TGI+V+D+  P   G
Sbjct: 86  LGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQSGTTELLETGIKVVDLLCPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 ALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R +AE G YP +DPL S SR  D     +E  ++   +   + R+EE +DI  I G  
Sbjct: 323 LSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKDIIAILGMD 382

Query: 397 PGVDLILD--KAVHQVPIIYDFLKQ 419
              +L  D  +AV +   I  FL Q
Sbjct: 383 ---ELSEDDKRAVRRARKIQRFLSQ 404


>gi|320409267|gb|ADW27223.1| ATP synthase beta subunit [Phoronis vancouverensis]
          Length = 367

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 18/290 (6%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R  + PS    GR+IN +G+PID    +   D+ + I  + P  ++    ++  +TGI+V
Sbjct: 23  RIPVGPSTL--GRIINVIGEPIDERGPVNT-DVYLPIHQEAPEFVDMSTEQEILETGIKV 79

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203
           +D+  P C G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      
Sbjct: 80  VDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYH 138

Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
           E IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I
Sbjct: 139 EMIESGVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDYEGQDVLLFIDNI 198

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+
Sbjct: 199 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 256

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             DP   +  + LD + VL+R +AE G YP VDPL S SR+ D     +E
Sbjct: 257 LTDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSNSRILDPNIVGEE 306


>gi|157132308|ref|XP_001655991.1| ATP synthase beta subunit [Aedes aegypti]
 gi|108881686|gb|EAT45911.1| ATP synthase beta subunit [Aedes aegypti]
          Length = 504

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 167/315 (53%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    + + +LS  I ++ P  ++    ++   TGI+V+
Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQEILVTGIKVV 166

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 226 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 285

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 286 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 343

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 344 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 403

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 404 LQDYKSLQDIIAILG 418


>gi|308238033|emb|CBK55607.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 420

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P 
Sbjct: 64  ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +      L
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      E   V+ S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 G 394
           G
Sbjct: 360 G 360


>gi|229136124|ref|ZP_04264877.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST196]
 gi|228647283|gb|EEL03365.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST196]
          Length = 469

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      R+E   +TGI+V+D+  P
Sbjct: 88  VTLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTRIEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|282892279|ref|ZP_06300675.1| hypothetical protein pah_c221o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497870|gb|EFB40221.1| hypothetical protein pah_c221o008 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 469

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 164/300 (54%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D  + L K D+    + K  P    Q ++   F+TGI+VID+  P   
Sbjct: 87  LGRIFNLLGEPLDHLEPLDK-DVPRASIHKAAPNFEDQEIQITLFETGIKVIDLLEPYPQ 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GKS ++    R   S      +   VGER RE  + ++E      L +
Sbjct: 146 GGKVGLFGGAGVGKSVIVMELIRNIASQHGGYSVFCGVGERTREGNDLWLEMKESGVLAR 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT + +AE+F   +  NVLL +D+I RF  +  E++   G 
Sbjct: 206 TSLVFGQMNEPPGARLRVALTGLAMAEHFRDQEHQNVLLFIDNIFRFIQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V ++ V  D++ DP   S+ S LD  
Sbjct: 266 MPSAVGYQPTLQTEIGALQERI--TSTKFGSITSVQAIYVPADDYTDPAPASIFSHLDAA 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +AE G YP VDPL S SR+ D  +  +E  ++   +  ++ R+++ ++I  I G
Sbjct: 324 TVLSRQIAELGIYPAVDPLGSTSRILDPHFIGEEHYRVARQVQRILQRYKDLQNIIAILG 383


>gi|254184692|ref|ZP_04891281.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
 gi|184215284|gb|EDU12265.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
          Length = 538

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  R+       GR+++  G P D   +L        I    PP   ++     F TGI+
Sbjct: 108 GPIRVPVGDAVLGRLLSVTGVPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E 
Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF 
Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP
Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  
Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 404 YRELQDV 410


>gi|229033937|ref|ZP_04188891.1| ATP synthase subunit beta [Bacillus cereus AH1271]
 gi|228728363|gb|EEL79385.1| ATP synthase subunit beta [Bacillus cereus AH1271]
          Length = 469

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|157136033|ref|XP_001656737.1| ATP synthase beta subunit [Aedes aegypti]
 gi|108881105|gb|EAT45330.1| ATP synthase beta subunit [Aedes aegypti]
          Length = 504

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 167/315 (53%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    + + +LS  I ++ P  ++    ++   TGI+V+
Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQEILVTGIKVV 166

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 226 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 285

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 286 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 343

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 344 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 403

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 404 LQDYKSLQDIIAILG 418


>gi|228988529|ref|ZP_04148616.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158866|ref|ZP_04286923.1| ATP synthase subunit beta [Bacillus cereus ATCC 4342]
 gi|228624477|gb|EEK81247.1| ATP synthase subunit beta [Bacillus cereus ATCC 4342]
 gi|228771146|gb|EEM19625.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 469

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|328957984|ref|YP_004375370.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. 17-4]
 gi|328674308|gb|AEB30354.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. 17-4]
          Length = 468

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+ ID  +   + D+    + +  P  +         +TGI+VID+  P   
Sbjct: 89  LGRMFNVLGETIDEKEPFPE-DVQRNPIHRNAPVFDELSSNTAILETGIKVIDLLAPYLK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +K+
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMQSSGVIKR 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDEVGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +V + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTSKGSITSIQAIYVPADDYTDPAPATVFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E+G YP VDPLAS S  L+ +    +  K+   +  L+ R+ E +DI  I G
Sbjct: 326 TNLERKLTEQGIYPAVDPLASTSSALSPEIVGEEHYKVAIEVQQLLQRYRELQDIIAILG 385


>gi|81846246|sp|Q8EWY8|ATPB_MYCPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|26453520|dbj|BAC43852.1| ATP synthase subunit beta [Mycoplasma penetrans HF-2]
          Length = 778

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 165/303 (54%), Gaps = 11/303 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
           +   GR+ N +G+PID      K + S   + K PP+ + Q  +   F+TGI+VID+  P
Sbjct: 379 SAVLGRMFNVVGEPIDNKPMPEKVEYSP--IHKKPPSFDEQSTKTEIFETGIKVIDLLVP 436

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-GDN 213
              G +IG+F G+G+GK+ L+     +         I + VGER RE  +   + + G  
Sbjct: 437 YVKGGKIGLFGGAGVGKTVLVQELIHNIATGHGGLSIFAGVGERTREGNDLYHEMIDGGV 496

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           + ++ +V    +E P  R    LTA+T+AE+F  +   +VLL +D+I RF+ +  E++  
Sbjct: 497 INQTALVFGQMNEPPGARMRVALTALTMAEHFRENNKQDVLLFIDNIFRFSQAGSEVSAL 556

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + L
Sbjct: 557 LGRIPSAVGYQPTLAFEMGQLQERI--TSTKSGSITSVQAVYVPADDLTDPAPSTTFAHL 614

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R +A  G YP ++PL S SR+ D +    E  K+  S+  ++ +FEE +DI  
Sbjct: 615 DAKTVLDRKIASLGIYPAINPLESSSRMLDPSIVGIEHYKVARSVQTILQKFEELQDIIA 674

Query: 392 IGG 394
           I G
Sbjct: 675 ILG 677


>gi|30265328|ref|NP_847705.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Ames]
 gi|47530867|ref|YP_022216.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188141|ref|YP_031394.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Sterne]
 gi|49481141|ref|YP_039296.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140257|ref|YP_086574.1| F0F1 ATP synthase subunit beta [Bacillus cereus E33L]
 gi|65317282|ref|ZP_00390241.1| COG0055: F0F1-type ATP synthase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118480344|ref|YP_897495.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis str. Al
           Hakam]
 gi|165873338|ref|ZP_02217941.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0488]
 gi|167636395|ref|ZP_02394695.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0442]
 gi|167642060|ref|ZP_02400286.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0193]
 gi|170689704|ref|ZP_02880881.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0465]
 gi|170709426|ref|ZP_02899834.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0389]
 gi|177656024|ref|ZP_02937131.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0174]
 gi|196036290|ref|ZP_03103688.1| ATP synthase F1, beta subunit [Bacillus cereus W]
 gi|196045693|ref|ZP_03112923.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB108]
 gi|225867282|ref|YP_002752660.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB102]
 gi|227818068|ref|YP_002818077.1| ATP synthase F1, beta subunit [Bacillus anthracis str. CDC 684]
 gi|228936590|ref|ZP_04099384.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949026|ref|ZP_04111298.1| ATP synthase subunit beta [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124809|ref|ZP_04253987.1| ATP synthase subunit beta [Bacillus cereus 95/8201]
 gi|229187531|ref|ZP_04314671.1| ATP synthase subunit beta [Bacillus cereus BGSC 6E1]
 gi|229603044|ref|YP_002869520.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0248]
 gi|254686272|ref|ZP_05150131.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. CNEVA-9066]
 gi|254724268|ref|ZP_05186052.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. A1055]
 gi|254735233|ref|ZP_05192942.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744437|ref|ZP_05202117.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Kruger B]
 gi|254755741|ref|ZP_05207774.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Vollum]
 gi|254759526|ref|ZP_05211551.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Australia
           94]
 gi|300117815|ref|ZP_07055582.1| F0F1 ATP synthase subunit beta [Bacillus cereus SJ1]
 gi|81824106|sp|Q630U3|ATPB_BACCZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81828124|sp|Q6HAY0|ATPB_BACHK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81837543|sp|Q81JZ5|ATPB_BACAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201691|sp|A0RL95|ATPB_BACAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808128|sp|C3P1F4|ATPB_BACAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808129|sp|C3LFH9|ATPB_BACAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808130|sp|C1F0M8|ATPB_BACC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|30260006|gb|AAP29191.1| ATP synthase F1, beta subunit [Bacillus anthracis str. Ames]
 gi|47506015|gb|AAT34691.1| ATP synthase F1, beta subunit [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49182068|gb|AAT57444.1| ATP synthase F1, beta subunit [Bacillus anthracis str. Sterne]
 gi|49332697|gb|AAT63343.1| ATP synthase F1, beta subunit [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973726|gb|AAU15276.1| ATP synthase F1, beta subunit [Bacillus cereus E33L]
 gi|118419569|gb|ABK87988.1| ATP synthase F1 subcomplex beta subunit [Bacillus thuringiensis
           str. Al Hakam]
 gi|164710935|gb|EDR16509.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0488]
 gi|167509978|gb|EDR85398.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0193]
 gi|167528229|gb|EDR91011.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0442]
 gi|170125659|gb|EDS94578.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0389]
 gi|170666346|gb|EDT17132.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0465]
 gi|172079879|gb|EDT64988.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0174]
 gi|195991082|gb|EDX55052.1| ATP synthase F1, beta subunit [Bacillus cereus W]
 gi|196023524|gb|EDX62201.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB108]
 gi|225788702|gb|ACO28919.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB102]
 gi|227002506|gb|ACP12249.1| ATP synthase F1, beta subunit [Bacillus anthracis str. CDC 684]
 gi|228595898|gb|EEK53578.1| ATP synthase subunit beta [Bacillus cereus BGSC 6E1]
 gi|228658600|gb|EEL14262.1| ATP synthase subunit beta [Bacillus cereus 95/8201]
 gi|228810599|gb|EEM56948.1| ATP synthase subunit beta [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823025|gb|EEM68863.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229267452|gb|ACQ49089.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0248]
 gi|298724679|gb|EFI65354.1| F0F1 ATP synthase subunit beta [Bacillus cereus SJ1]
          Length = 469

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|328951109|ref|YP_004368444.1| V-type ATP synthase beta chain [Marinithermus hydrothermalis DSM
           14884]
 gi|328451433|gb|AEB12334.1| V-type ATP synthase beta chain [Marinithermus hydrothermalis DSM
           14884]
          Length = 470

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 15/309 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +GKPIDG   +        + S + P + R++ E+  +TGI  ID
Sbjct: 81  RLGVSKEMLGRRFNGIGKPIDGLPPVTPEKRLPIVGSPINP-VARRKPEEFIQTGISTID 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207
           +   L  GQ++ +F+GSG+  + L +  AR       D    V+ + +G   RE+  F++
Sbjct: 140 VMNTLIRGQKLPIFSGSGLPANELAAQIARQATVPGEDVQFAVVFAAMGITQRELAYFVQ 199

Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           ++     L +SV+ +  +D+  I R + P  A+T AEY + + D +VL+IL  +T +  +
Sbjct: 200 EFERTGALSRSVLFLNRADDPTIERILTPRMALTTAEYLAFEHDYHVLVILTDMTNYCEA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI  +  E+P  RGYP  ++++L  + ER G  E +KG++T +  + +  D+   PI 
Sbjct: 260 LREIGASREEIPGRRGYPGYMYTDLASIYERAGVVEGKKGSVTQIPILSMPDDDRTHPIP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIH 381
           D    I +G I L+R L  +G +PP++PL S+SRLA+    K  + ++ K VS    L  
Sbjct: 320 DLTGYITEGQIQLSRELHRKGIFPPINPLPSLSRLANNGIGKGKTREDHKQVSD--QLYS 377

Query: 382 RFEETRDIR 390
            +    DIR
Sbjct: 378 AYANGEDIR 386


>gi|291458278|ref|ZP_06597668.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418811|gb|EFE92530.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 463

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID  + +   + S EI  K P  +++  V++  +TGI+VID+  P   G
Sbjct: 85  LGRLFNVLGETIDKKEEILDSE-SWEIHRKPPSFVDQSPVQEVLETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      +K +
Sbjct: 144 GKVGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLYTEMTASGVIKNT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +ESP  R     T +T+AEYF   +  +VLL +D+I RF  +  E+++  G +
Sbjct: 204 ALVFGQMNESPGARMRVAETGLTMAEYFRDVEHKDVLLFIDNIFRFVQAGSEVSSLLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   +G++T+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEMGQLQERIAST--RQGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ ++     E  +   ++   + ++ E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEEDIVGKEHYETAQAVLRSLQKYRELQDIIAILG 380


>gi|229164252|ref|ZP_04292185.1| ATP synthase subunit beta [Bacillus cereus R309803]
 gi|228619192|gb|EEK76085.1| ATP synthase subunit beta [Bacillus cereus R309803]
          Length = 468

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 87  ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|209363699|ref|YP_001423602.2| F0F1 ATP synthase subunit beta [Coxiella burnetii Dugway 5J108-111]
 gi|212211723|ref|YP_002302659.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuG_Q212]
 gi|212217738|ref|YP_002304525.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuK_Q154]
 gi|215919300|ref|NP_820921.2| F0F1 ATP synthase subunit beta [Coxiella burnetii RSA 493]
 gi|206584185|gb|AAO91435.2| ATP synthase beta chain [Coxiella burnetii RSA 493]
 gi|207081632|gb|ABS77940.2| ATP synthase beta chain [Coxiella burnetii Dugway 5J108-111]
 gi|212010133|gb|ACJ17514.1| ATP synthase beta chain [Coxiella burnetii CbuG_Q212]
 gi|212012000|gb|ACJ19380.1| ATP synthase beta chain [Coxiella burnetii CbuK_Q154]
          Length = 483

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 170/326 (52%), Gaps = 15/326 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +   +  + I    P  + +    +  +TGI+V+D+  P   G
Sbjct: 108 LGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKG 166

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 167 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 226

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 227 ALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMP 286

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 287 SAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 344

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R +AE G YP +DPL S SR  D     +E  ++   +   + R+EE +DI  I    
Sbjct: 345 LSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKDIIAI---- 400

Query: 397 PGVDLILD---KAVHQVPIIYDFLKQ 419
            G+D + +   +AV +   I  FL Q
Sbjct: 401 LGMDELSEDDKRAVRRARKIQRFLSQ 426


>gi|153206110|ref|ZP_01945373.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177']
 gi|165918717|ref|ZP_02218803.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 334]
 gi|81839029|sp|Q83AF5|ATPB_COXBU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081329|sp|A9KBF7|ATPB_COXBN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120577240|gb|EAX33864.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177']
 gi|165917545|gb|EDR36149.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 334]
          Length = 461

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 169/325 (52%), Gaps = 13/325 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +   +  + I    P  + +    +  +TGI+V+D+  P   G
Sbjct: 86  LGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 ALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R +AE G YP +DPL S SR  D     +E  ++   +   + R+EE +DI  I G  
Sbjct: 323 LSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKDIIAILGMD 382

Query: 397 PGVDLILD--KAVHQVPIIYDFLKQ 419
              +L  D  +AV +   I  FL Q
Sbjct: 383 ---ELSEDDKRAVRRARKIQRFLSQ 404


>gi|114331979|ref|YP_748201.1| F0F1 ATP synthase subunit beta [Nitrosomonas eutropha C91]
 gi|122313313|sp|Q0AEJ6|ATPB2_NITEC RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|114308993|gb|ABI60236.1| ATP synthase F1, beta subunit [Nitrosomonas eutropha C91]
          Length = 485

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 11/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N  G+PIDG  +     +S  I  + PP +  + V     +TGI+ ID+ +P+  G
Sbjct: 113 GRMLNVFGEPIDGKPA-PNATISRSI-HQAPPVLEERVVHSTILETGIKAIDLLSPIERG 170

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KS 217
            + G+F G+G+GK+ L++    +       +SL   +GER RE  E   +     ++ K+
Sbjct: 171 GKTGLFGGAGVGKTVLITELINNTAQHHKGVSLFCGIGERSREAEELYREMGEAGVRDKT 230

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
           V++     E+P +R +   TA+T+AEYF    G +VLL++D++ RF  +  E++   G +
Sbjct: 231 VMLFGQMSEAPGVRFLVGKTALTMAEYFRDDLGQDVLLLIDNVFRFVQAGSEVSGLLGRM 290

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ +EL  L ERI  +   KG IT++ +V V  D+  DP A  + S L   +
Sbjct: 291 PSRVGYQPTLATELASLQERI--TSTRKGAITSIQAVYVPADDFTDPAAAHIFSHLSASV 348

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+R  A EG YP VDPLAS S +   A        +  ++   +  +EE RDI
Sbjct: 349 VLSRKRASEGLYPAVDPLASTSVMLTPAVVGQRHYDIARAVRRTLAEYEELRDI 402


>gi|256372558|ref|YP_003110382.1| ATP synthase F1, beta subunit [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009142|gb|ACU54709.1| ATP synthase F1, beta subunit [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 471

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G V N LG+P+D     G  DL  EI    PP  + +   + F+TGI+VID+  P   G
Sbjct: 94  LGHVFNVLGQPLDAPSLEGADDL-WEIHRSAPPLEDLEPKAQMFETGIKVIDLLEPYVQG 152

Query: 162 QRIGVFAGSGIGKSTL-LSMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L + M  R         + + VGER RE  +  +E      + K+
Sbjct: 153 GKVGLFGGAGVGKTVLIMEMINRVAQQHGGVSVFAGVGERTREGTDLLLEMQESGVISKA 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L A+T+AEYF   K  +VLL +D+I RF  +  E++   G L
Sbjct: 213 ALVYGQMDEPPGVRLRVGLAALTMAEYFRDVKDQDVLLFIDNIFRFVQAGSEVSALLGRL 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +   + +IT++ +V V  D++ DP   +  + LD   
Sbjct: 273 PSAVGYQPTLADEMGELQERI--TSTRRRSITSLQAVYVPADDYTDPAPFTTFTFLDATT 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A  G YP VDPLAS S + D     +   ++  S+  ++ R+++ +DI  I G
Sbjct: 331 ELSRQIASLGIYPAVDPLASTSNILDPTIVGERHYQVARSVQQILQRYKDLQDIIAILG 389


>gi|190358736|sp|Q04G20|ATPB_OENOB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 466

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+DG D +        I    P         +  +TGI+VID+  P  
Sbjct: 85  ATLGRVFNVLGEPVDGGDPIPNSVDRHPIHRSAPKYDELATSTEVLETGIKVIDLLEPYL 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G + G+F G+G+GK+ L+     +       IS+   VGER RE  + + E      LK
Sbjct: 145 RGGKTGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLK 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
            + +V    +E P  R    LT +T+AE F   +G +VLL +D+I RF  +  E++   G
Sbjct: 205 NTAMVYGQMNEPPGARMRVGLTGLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLG 264

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
              L RSL ++G YP VDPL S S  L       D  ++ + + H + R++E +DI
Sbjct: 323 TTNLERSLTQQGIYPAVDPLESTSSALTPDIVGEDHYEVATQVQHFLQRYKELQDI 378


>gi|309390205|gb|ADO78085.1| ATP synthase F1 subcomplex beta subunit [Halanaerobium praevalens
           DSM 2228]
          Length = 470

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID    +G  D  M I    P    ++   + F+TGI+VID+  P   G
Sbjct: 90  LGRVFNVLGETIDNRGEVGT-DERMPIHRPAPKFEEQESSTELFETGIKVIDLLAPYTRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +     + S VGER RE  + ++E    D L K 
Sbjct: 149 GKVGLFGGAGVGKTVLIQELINNIATEHGGYSVFSGVGERTREGNDLWLEFQEADILDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDEAGQDVLLFIDNIFRFIQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  ++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 269 PSAVGYQPTLAYDVGTLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S S + D     DE   V+  +  ++  +++ +DI  I G
Sbjct: 327 VLSRDIVEKGIYPAVDPLDSTSNILDPRIIGDEHYDVAREVQEILQEYKDLQDIIAILG 385


>gi|242280912|ref|YP_002993041.1| ATP synthase F1, beta subunit [Desulfovibrio salexigens DSM 2638]
 gi|242123806|gb|ACS81502.1| ATP synthase F1, beta subunit [Desulfovibrio salexigens DSM 2638]
          Length = 467

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 23/305 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N +G+P+D    +G  D   S+ I    P    +    +  +TGI+V+D+  P   
Sbjct: 92  GRILNVVGRPVD---EMGPIDAKESLPIHRAAPEFTEQSTKVELLETGIKVVDLLVPFPK 148

Query: 161 GQRIGVFAGSGIGKSTLL--------SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           G ++G+F G+G+GK+ +L               CF     + VGER RE  +   +    
Sbjct: 149 GGKMGLFGGAGVGKTVILMEMINNIAKQHGGKSCF-----AGVGERTREGNDLYHEMKDA 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             L+KS +V    +E P  R    LTA+TIAEYF   +G++VLL +D+I RF  +  E++
Sbjct: 204 GVLEKSALVYGQMNEPPGARARVALTALTIAEYFRDVEGEDVLLFIDNIFRFTQAGSEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S
Sbjct: 264 ALLGRMPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFS 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LDG +VL+R +AE G YP VDPL S SR+ D      +       +  ++ ++++ +DI
Sbjct: 322 HLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNILGVEHYNTAREVQMVLQKYKDLQDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|310818216|ref|YP_003950574.1| ATP synthase subunit beta [Stigmatella aurantiaca DW4/3-1]
 gi|309391288|gb|ADO68747.1| ATP synthase subunit beta [Stigmatella aurantiaca DW4/3-1]
          Length = 481

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G P+D    +     +  I    P  + +    + F+TGI+VID+  P   G 
Sbjct: 96  GRILNVIGAPVDERGPI-TSQQTWPIHRPAPTFVEQDVRVQAFETGIKVIDLLGPYTRGG 154

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ LL    R+   ++    + + VGER RE  +   +    N+     
Sbjct: 155 KIGLFGGAGVGKTVLLMELIRNVAKERGGFSVFAGVGERTREGNDLYHEMQEGNVINTKN 214

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               + V+V    +E P  R    L+A+TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 215 LEESQCVLVYGQMNEPPGARARVALSALTIAEYFRDVEGRDVLLFVDNIFRFTQAGSEVS 274

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG++T+V ++ V  D+  DP   +  +
Sbjct: 275 ALLGRIPSAVGYQPTLSTEMGALQERI--TSTNKGSVTSVQAIYVPADDLTDPAPATTFA 332

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VLNR+++E G YP VDPL S SR+ D      E   V+  +  ++ +++E +DI
Sbjct: 333 HLDATTVLNRAISELGIYPAVDPLDSTSRILDPNVVGPEHYAVARKVQGILQKYKELQDI 392

Query: 390 RLIGG 394
             I G
Sbjct: 393 IAILG 397


>gi|283853224|ref|ZP_06370476.1| ATP synthase F1, beta subunit [Desulfovibrio sp. FW1012B]
 gi|283571397|gb|EFC19405.1| ATP synthase F1, beta subunit [Desulfovibrio sp. FW1012B]
          Length = 470

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 13/309 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVE-KGFKTGIRV 151
           R+       GR++N +G+P+D    +G  D + M  + +  PA   Q    +  +TGI+V
Sbjct: 86  RVPVGKAALGRILNVVGRPVD---EMGPVDAAAMWPIHRPAPAFVDQSTSIELLETGIKV 142

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIED 208
           ID+  P   G ++G+F G+G+GK+ +L     +       +S+   VGER RE  +   +
Sbjct: 143 IDLLIPFPKGGKMGLFGGAGVGKTVVLMELINNIAKHHGGLSVFAGVGERTREGNDLYNE 202

Query: 209 YL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
           +   D L K+ +V    +E P  R    LTA+T AEYF   +G +VLL +D+I RF  + 
Sbjct: 203 FKEADILGKASLVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFIDNIFRFTQAG 262

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V +V V  D+  DP   
Sbjct: 263 SEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPA 320

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEE 385
           +  S LDG +VL+R +AE G YP VDPL S SR+ D      D       +   + ++++
Sbjct: 321 TTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPLVLGGDHYATAREVQMSLQKYKD 380

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 381 LQDIIAILG 389


>gi|196039564|ref|ZP_03106869.1| ATP synthase F1, beta subunit [Bacillus cereus NVH0597-99]
 gi|218906482|ref|YP_002454316.1| ATP synthase F1, beta subunit [Bacillus cereus AH820]
 gi|228917914|ref|ZP_04081450.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930312|ref|ZP_04093316.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229094415|ref|ZP_04225487.1| ATP synthase subunit beta [Bacillus cereus Rock3-42]
 gi|301056772|ref|YP_003794983.1| ATP synthase subunit B [Bacillus anthracis CI]
 gi|226739976|sp|B7JGN0|ATPB_BACC0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|196029724|gb|EDX68326.1| ATP synthase F1, beta subunit [Bacillus cereus NVH0597-99]
 gi|218536432|gb|ACK88830.1| ATP synthase F1, beta subunit [Bacillus cereus AH820]
 gi|228688952|gb|EEL42779.1| ATP synthase subunit beta [Bacillus cereus Rock3-42]
 gi|228829298|gb|EEM74931.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841711|gb|EEM86822.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300378941|gb|ADK07845.1| ATP synthase subunit B [Bacillus cereus biovar anthracis str. CI]
          Length = 469

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|53802691|ref|YP_112553.1| F0F1 ATP synthase subunit beta [Methylococcus capsulatus str. Bath]
 gi|81823727|sp|Q60CR4|ATPB_METCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|53756452|gb|AAU90743.1| ATP synthase F1, beta subunit [Methylococcus capsulatus str. Bath]
          Length = 460

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  K P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGDPIDEKGPIGEKE-RWGIHRKAPSYQDQAAANELLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPNLAEEMGILQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E  +    +   + R++E RDI  I G
Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLVIGHEHYETTRRVQSTLQRYKELRDIIAILG 377


>gi|167566739|ref|ZP_02359655.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis EO147]
          Length = 391

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 153/293 (52%), Gaps = 12/293 (4%)

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++   G+P D   +L        I    PP   ++     F TGI+VID+  PL  G + 
Sbjct: 1   MLTVTGEPGDDGAALAPDVARRPIHRGAPPLSEQKSSTALFATGIKVIDLLAPLAQGGKA 60

Query: 165 GVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
            +F G+G+GK+ L+     +M  R       + + +GER RE  E + D  G   L ++V
Sbjct: 61  AMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTV 118

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   G LP
Sbjct: 119 LVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLP 178

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D  +V
Sbjct: 179 SRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVV 236

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           L+R++A EG YP +DP+AS S L D     DE   V+  +  +I  + E +D+
Sbjct: 237 LSRAMAAEGMYPAIDPVASSSILLDPLVVGDEHVEVAIEVRRVIEHYRELQDV 289


>gi|154148258|ref|YP_001406268.1| F0F1 ATP synthase subunit beta [Campylobacter hominis ATCC BAA-381]
 gi|190358270|sp|A7I177|ATPB_CAMHC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|153804267|gb|ABS51274.1| ATP synthase F1, beta subunit [Campylobacter hominis ATCC BAA-381]
          Length = 465

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N  G  ID G+    +   S+    + PP+   Q  +   F+TGI+V+D+  P  
Sbjct: 87  LGRIFNVTGDLIDEGEPEDFETRWSIH---RDPPSFEDQSTKSEIFETGIKVVDLLAPYA 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +      L 
Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELIHNVAFKHNGYSVFAGVGERTREGNDLYNEMKESGVLD 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K  +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G
Sbjct: 204 KVALTYGQMNEPPGARNRIALTGLTMAEYFRDELGLDVLMFIDNIFRFSQSGSEMSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +V V  D+  DP   +V + LD 
Sbjct: 264 RIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VLNRS+AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I 
Sbjct: 322 TTVLNRSIAEKGIYPAVDPLNSTSRMLDPQIVGEEHYKIARGVQAVLQKYKDLQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|126653441|ref|ZP_01725537.1| F0F1 ATP synthase subunit beta [Bacillus sp. B14905]
 gi|126589797|gb|EAZ83930.1| F0F1 ATP synthase subunit beta [Bacillus sp. B14905]
          Length = 471

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID  + +        I  + P         +  +TGI+V+D+  P   G
Sbjct: 90  LGRVFNVLGEVIDLGEEIPADARRDSIHREAPTFEELSTTVEILETGIKVVDLLAPYIKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +K++
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 270 PSAVGYQPTLATEMGKLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L+E G YP VDPLAS SR L+ +   A+   + + +   I R+ E +DI  I G
Sbjct: 328 NLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAIATGVQRTIQRYRELQDIIAILG 386


>gi|229105898|ref|ZP_04236522.1| ATP synthase subunit beta [Bacillus cereus Rock3-28]
 gi|228677472|gb|EEL31725.1| ATP synthase subunit beta [Bacillus cereus Rock3-28]
          Length = 469

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|157151073|ref|YP_001450821.1| F0F1 ATP synthase subunit beta [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189081352|sp|A8AYG1|ATPB_STRGC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157075867|gb|ABV10550.1| ATP synthase F1, beta subunit [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 468

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D   G       I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFGDDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|328545829|ref|YP_004305938.1| F0F1 ATP synthase subunit beta [polymorphum gilvum SL003B-26A1]
 gi|326415569|gb|ADZ72632.1| F0F1 ATP synthase subunit beta [Polymorphum gilvum SL003B-26A1]
          Length = 474

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +   D    I  + P  + +    +   TGI+V+D+  P   G
Sbjct: 87  LGRIMNVIGEPVDEAGPIPH-DAKRAIHQEAPSFVEQSTEAQILVTGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKK 204

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 205 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP   S  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAVYVPADDLTDPAPASTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VLNR++AE+G YP VDPL S SR+ D     DE   V+  +   + R++  +D
Sbjct: 323 AHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPRIIGDEHYTVARKVQETLQRYKALQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|300174065|ref|YP_003773231.1| ATP synthase F1 subunit beta [Leuconostoc gasicomitatum LMG 18811]
 gi|299888444|emb|CBL92412.1| ATP synthase F1, beta subunit [Leuconostoc gasicomitatum LMG 18811]
          Length = 466

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 18/301 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-----IMSKVPPAMNRQRVEKGFKTGIRVIDI 154
              GRV N LG+P+D +     GD+S E     I    P         +  +TGI+VID+
Sbjct: 85  ATLGRVFNVLGEPVDNN-----GDISAETPRHSIHRDAPKYDELANSTEILETGIKVIDL 139

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG 211
             P   G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +   
Sbjct: 140 LAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAE 199

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
              LK++ +V    +E P  R    LT +T+AE F   +G +VLL +D+I RF  +  E+
Sbjct: 200 SGVLKQTAMVYGQMNEPPGARMRVALTGLTMAENFRDDEGKDVLLFIDNIFRFTQAGSEV 259

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  
Sbjct: 260 SALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTF 317

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD    L RSL ++G YP VDPLAS S   D      E  ++ + +   + R+ E +D
Sbjct: 318 AHLDATTNLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYEIATEVQRTLQRYRELQD 377

Query: 389 I 389
           I
Sbjct: 378 I 378


>gi|229087793|ref|ZP_04219913.1| ATP synthase subunit beta [Bacillus cereus Rock3-44]
 gi|228695521|gb|EEL48386.1| ATP synthase subunit beta [Bacillus cereus Rock3-44]
          Length = 469

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|262283120|ref|ZP_06060887.1| F0F1 ATP synthase subunit beta [Streptococcus sp. 2_1_36FAA]
 gi|262261372|gb|EEY80071.1| F0F1 ATP synthase subunit beta [Streptococcus sp. 2_1_36FAA]
          Length = 468

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D   G       I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFGDDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|327399150|ref|YP_004340019.1| ATP synthase subunit beta [Hippea maritima DSM 10411]
 gi|327181779|gb|AEA33960.1| ATP synthase subunit beta [Hippea maritima DSM 10411]
          Length = 468

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 158/301 (52%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR++N +G+P+D    LG    D+   I    PP   +    + F+TGI+VID+  P  
Sbjct: 91  LGRIMNVVGEPVD---ELGPISSDVRWPIHRDAPPLEEQSTSSEMFETGIKVIDLLCPYA 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G + G+F G+G+GK+ L+     +        S+   VGER RE  +   +      L 
Sbjct: 148 KGGKTGLFGGAGVGKTVLIMELIHNVAMHHGGYSVFCGVGERTREGNDLWNEMKESGVLD 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ ++    +E P  R    LT +T+AEYF   K  +VL+ +D+I RF  +  E++   G
Sbjct: 208 KAALIYGQMNEPPGARARVGLTGLTVAEYFRDEKHLDVLIFIDNIFRFTQAGSEVSALLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  S LD 
Sbjct: 268 RIPSAVGYQPTLGTDMGELQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFSHLDA 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VL+R LAE G YP VDPL S SR+ D A    E  +    +  ++ R++E +DI  I 
Sbjct: 326 TTVLSRKLAELGIYPAVDPLDSTSRILDPAVVGREHYETARQVQEILQRYKELQDIIAIL 385

Query: 394 G 394
           G
Sbjct: 386 G 386


>gi|146088806|ref|XP_001466152.1| ATPase beta subunit [Leishmania infantum JPCM5]
 gi|134070254|emb|CAM68591.1| putative ATPase beta subunit [Leishmania infantum JPCM5]
 gi|322499677|emb|CBZ34751.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 525

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+  + M I ++ P   ++   +    TGI+VID+  P C G 
Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G NVLL +D+I RF  +  E++ 
Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R++AE G YP V+PL   SR+ D      D   +   +  ++ +++E +DI
Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416


>gi|89092247|ref|ZP_01165201.1| ATP synthase subunit B [Oceanospirillum sp. MED92]
 gi|89083335|gb|EAR62553.1| ATP synthase subunit B [Oceanospirillum sp. MED92]
          Length = 458

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 171/332 (51%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +S G  V + G    +       GR+++ LG PID    +G+ +  M 
Sbjct: 49  VVRAIAMGQTEGVSRGQDVANTGAPVSVPVGTATLGRIMDVLGNPIDECGEIGEEE-RMP 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 108 IHRKAPSYDEQAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 167

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +    S+   VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 168 EHSGFSVFAGVGERTREGNDFYYEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 227

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 228 KFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  S LD  +VL+R +AE G YP VDPL S SR  D 
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDP 345

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                E  ++  ++  ++ R++E +DI  I G
Sbjct: 346 LVIGTEHYEIARNVQGVLQRYKELKDIIAILG 377


>gi|323702636|ref|ZP_08114298.1| ATP synthase F1, beta subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|323532455|gb|EGB22332.1| ATP synthase F1, beta subunit [Desulfotomaculum nigrificans DSM
           574]
          Length = 472

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+ IDG + + K D    I    P  +++    +  +TGI+VID+  P   G
Sbjct: 92  LGRLLNVLGEVIDGKEPV-KADKYYPIHRPAPALIDQSTKAEVLETGIKVIDLMIPFLKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKS 217
            +IG+F G+G+GK+ ++     +       IS+   VGER RE  +   +      L K+
Sbjct: 151 GKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLDKT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++V    +E P  R    LT +T+AEYF   +G + LL +D+I RF  +  E++   G +
Sbjct: 211 IMVFGQMNEPPGARLRVGLTGLTMAEYFRDEEGADTLLFIDNIFRFTQAGSEVSALLGRM 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG++T+V ++ V  D+  DP   +  + LD  +
Sbjct: 271 PSAVGYQPTLATEMGQLQERI--TSTRKGSVTSVQAIYVPADDLTDPAPANAFAHLDATV 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D      E  +    +  ++ R++E +DI  I G
Sbjct: 329 VLSRQIAELGIYPAVDPLDSTSRILDPQIVGKEHYECARGVQAVLQRYKELQDIIAILG 387


>gi|304392606|ref|ZP_07374546.1| ATP synthase F1, beta subunit [Ahrensia sp. R2A130]
 gi|303295236|gb|EFL89596.1| ATP synthase F1, beta subunit [Ahrensia sp. R2A130]
          Length = 513

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 22/312 (7%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GR+IN +G+P+D    +   + +  I ++ PP + +    +   TGI+V+D+  P   
Sbjct: 120 MLGRIINVIGEPVDEVGPITATE-TRAIHAEAPPYIEQSTNSEILVTGIKVVDLLAPYAK 178

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
           G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  N+  
Sbjct: 179 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESNVNV 237

Query: 216 ------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
                       K+ +V    +E P  R    L+ +TIAE F  KG +VL  +D+I RF 
Sbjct: 238 DPNENNGSTTGSKAALVYGQMNEPPGARARVALSGLTIAEDFRDKGQDVLFFVDNIFRFT 297

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP
Sbjct: 298 QAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTTKGSITSVQAIYVPADDLTDP 355

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              +  + LD   VLNRS+AE+G YP VDPL S SR+ D     DE   V+  +  ++ R
Sbjct: 356 APATSFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPLVIGDEHYAVAREVQEVLQR 415

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 416 YKALQDIIAILG 427


>gi|56461719|ref|YP_157000.1| F0F1 ATP synthase subunit beta [Idiomarina loihiensis L2TR]
 gi|81600226|sp|Q5QZI6|ATPB_IDILO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56180729|gb|AAV83451.1| F0F1-type ATP synthase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 461

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +  M I    P    +    +  +TGI+VID+  P   G
Sbjct: 86  LGRIMDVLGNPIDEAGPIGE-EEKMSIHRAAPSYEEQSNTNELLETGIKVIDLICPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           LNR +A  G YP VDPL S SR  D     DE       +  ++ R++E +DI  I G
Sbjct: 323 LNRDIASLGIYPAVDPLDSTSRQLDPQVIGDEHYDTAMGVQEVLQRYKELKDIIAILG 380


>gi|157870646|ref|XP_001683873.1| ATPase beta subunit [Leishmania major strain Friedlin]
 gi|68126940|emb|CAJ05183.1| putative ATPase beta subunit [Leishmania major strain Friedlin]
          Length = 525

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+  + M I ++ P   ++   +    TGI+VID+  P C G 
Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G NVLL +D+I RF  +  E++ 
Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R++AE G YP V+PL   SR+ D      D   +   +  ++ +++E +DI
Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416


>gi|229020524|ref|ZP_04177270.1| ATP synthase subunit beta [Bacillus cereus AH1273]
 gi|229026744|ref|ZP_04183077.1| ATP synthase subunit beta [Bacillus cereus AH1272]
 gi|228734539|gb|EEL85200.1| ATP synthase subunit beta [Bacillus cereus AH1272]
 gi|228740771|gb|EEL91023.1| ATP synthase subunit beta [Bacillus cereus AH1273]
          Length = 469

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|229193557|ref|ZP_04320501.1| ATP synthase subunit beta [Bacillus cereus ATCC 10876]
 gi|228589862|gb|EEK47737.1| ATP synthase subunit beta [Bacillus cereus ATCC 10876]
          Length = 459

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 78  VTLGRVFNVLGDAIDLDGEV-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 136 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 194

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 195 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 254

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 255 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 312

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 313 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 372

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 373 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 401


>gi|206970293|ref|ZP_03231246.1| ATP synthase F1, beta subunit [Bacillus cereus AH1134]
 gi|228924040|ref|ZP_04087316.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955552|ref|ZP_04117555.1| ATP synthase subunit beta [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072772|ref|ZP_04205971.1| ATP synthase subunit beta [Bacillus cereus F65185]
 gi|229082519|ref|ZP_04214982.1| ATP synthase subunit beta [Bacillus cereus Rock4-2]
 gi|229153468|ref|ZP_04281646.1| ATP synthase subunit beta [Bacillus cereus m1550]
 gi|229181552|ref|ZP_04308878.1| ATP synthase subunit beta [Bacillus cereus 172560W]
 gi|206734870|gb|EDZ52039.1| ATP synthase F1, beta subunit [Bacillus cereus AH1134]
 gi|228601920|gb|EEK59415.1| ATP synthase subunit beta [Bacillus cereus 172560W]
 gi|228630072|gb|EEK86723.1| ATP synthase subunit beta [Bacillus cereus m1550]
 gi|228700951|gb|EEL53474.1| ATP synthase subunit beta [Bacillus cereus Rock4-2]
 gi|228710263|gb|EEL62238.1| ATP synthase subunit beta [Bacillus cereus F65185]
 gi|228804114|gb|EEM50730.1| ATP synthase subunit beta [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228835530|gb|EEM80895.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 468

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 87  VTLGRVFNVLGDAIDLDGEV-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|255003175|ref|ZP_05278139.1| F0F1 ATP synthase subunit beta [Anaplasma marginale str. Puerto
           Rico]
          Length = 485

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 180/342 (52%), Gaps = 21/342 (6%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S GD     G   ++P      GRV + LG+PIDG  S+   D+   
Sbjct: 67  MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 125

Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182
            +    P+++ QRV  +   TGI+V+D+  P   G ++G+F G+G+GK+     L+S  A
Sbjct: 126 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 185

Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234
               F   + + VGER RE     RE +E  +   D   KS  V+V    +E P  R   
Sbjct: 186 THKGFS--VFAGVGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 243

Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF  S+G +VL  +D++ RF  S  E++   G +P A GY  ++ +E+  +
Sbjct: 244 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 303

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +    G+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 304 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 361

Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L S S+ L+ +   ++  ++   +  ++  ++  +DI  I G
Sbjct: 362 LESTSQALSPEVVGSEHYEVAQEVKRILQTYKSLQDIIAILG 403


>gi|213853005|ref|ZP_03382537.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 179

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 105/161 (65%), Gaps = 2/161 (1%)

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A T+AEYF  +G  V+L +DS+TR+A ++R++A  SGE P  RGYP SVF  LPRLLER 
Sbjct: 7   ATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER- 65

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            P    +G+ITA  +VL++ +   DP+AD +RSILDGH+ L+R LA +G YP +D L SV
Sbjct: 66  -PGATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSV 124

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           SR+  +  +    +  S++  L+ R EE +    +G YRP 
Sbjct: 125 SRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPA 165


>gi|323483071|ref|ZP_08088464.1| hypothetical protein HMPREF9474_00213 [Clostridium symbiosum
           WAL-14163]
 gi|323691483|ref|ZP_08105754.1| ATP synthase F1 [Clostridium symbiosum WAL-14673]
 gi|323403611|gb|EGA95916.1| hypothetical protein HMPREF9474_00213 [Clostridium symbiosum
           WAL-14163]
 gi|323504456|gb|EGB20247.1| ATP synthase F1 [Clostridium symbiosum WAL-14673]
          Length = 471

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+ IDG + L   D    ++ + PP+   Q  V +  +TGI+VID+  P   
Sbjct: 85  LGRLFNVLGETIDGGEGLK--DQEHWVIHRDPPSFEDQSPVVEVLETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+    ++   +     I + VGER RE  + ++E      L+K
Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWVEMKESGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDREHQDVLLFIDNIFRFVQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +++  G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLANEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E  +    +  ++ +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEAEVVGEEHYETARRVQEILQKYKELQDIIAILG 380


>gi|229175979|ref|ZP_04303475.1| ATP synthase subunit beta [Bacillus cereus MM3]
 gi|228607472|gb|EEK64798.1| ATP synthase subunit beta [Bacillus cereus MM3]
          Length = 469

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  VTLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|255657422|ref|ZP_05402831.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-23m63]
 gi|296449018|ref|ZP_06890808.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP08]
 gi|296879841|ref|ZP_06903814.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP07]
 gi|296262111|gb|EFH08916.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP08]
 gi|296429130|gb|EFH15004.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP07]
          Length = 464

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LGKP+DG  +  K    + I    P     +   +  +TGI+V+D+  P   G
Sbjct: 87  LGRIFNVLGKPVDGKPA-PKSAPKLPIHRPAPAYDELETTAEILETGIKVVDLLAPYLKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      + K+
Sbjct: 146 GKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMSESGVINKT 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE+F   +G +VLL +D+I RF  +  E++   G +
Sbjct: 206 ALVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQDVLLFVDNIFRFTQAGSEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD   
Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++  G YP VDPL S SR+ D +    E  ++   +  ++ R++E +DI  I G
Sbjct: 324 VLSRQISSLGIYPAVDPLESTSRILDPSIVGKEHYEVARGVQSILQRYKELQDIIAILG 382


>gi|152993354|ref|YP_001359075.1| F0F1 ATP synthase subunit beta [Sulfurovum sp. NBC37-1]
 gi|190358707|sp|A6QB59|ATPB_SULNB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151425215|dbj|BAF72718.1| F0F1-type ATP synthase, beta subunit [Sulfurovum sp. NBC37-1]
          Length = 466

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+ ID    + +      I    PP  ++    + F+TGI+V+D+  P   G
Sbjct: 87  LGRIFNVIGEAIDEAGPV-EAKTHWSIHRDPPPFEDQSTKTEVFETGIKVVDLLAPYSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +         + + VGER RE  +   +    N L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELINNVAMKHSGYSVFAGVGERTREGNDLYYEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +      E P  R    LT +T+AEYF  + G +VL+ +D+I RFA S  E++   G +
Sbjct: 206 ALCYGQMSEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFAQSGSEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +   KG+IT+V +V V  D+  DP   SV + LD   
Sbjct: 266 PSAVGYQPTLSREMGALQERI--TSTTKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VLNRS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ ++++ +DI  I G
Sbjct: 324 VLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYNVARGVQQILQKYKDLQDIIAILG 382


>gi|115379930|ref|ZP_01466987.1| ATP synthase F1, beta subunit [Stigmatella aurantiaca DW4/3-1]
 gi|115363055|gb|EAU62233.1| ATP synthase F1, beta subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 421

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G P+D    +     +  I    P  + +    + F+TGI+VID+  P   G 
Sbjct: 36  GRILNVIGAPVDERGPI-TSQQTWPIHRPAPTFVEQDVRVQAFETGIKVIDLLGPYTRGG 94

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ LL    R+   ++    + + VGER RE  +   +    N+     
Sbjct: 95  KIGLFGGAGVGKTVLLMELIRNVAKERGGFSVFAGVGERTREGNDLYHEMQEGNVINTKN 154

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               + V+V    +E P  R    L+A+TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 155 LEESQCVLVYGQMNEPPGARARVALSALTIAEYFRDVEGRDVLLFVDNIFRFTQAGSEVS 214

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG++T+V ++ V  D+  DP   +  +
Sbjct: 215 ALLGRIPSAVGYQPTLSTEMGALQERI--TSTNKGSVTSVQAIYVPADDLTDPAPATTFA 272

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VLNR+++E G YP VDPL S SR+ D      E   V+  +  ++ +++E +DI
Sbjct: 273 HLDATTVLNRAISELGIYPAVDPLDSTSRILDPNVVGPEHYAVARKVQGILQKYKELQDI 332

Query: 390 RLIGG 394
             I G
Sbjct: 333 IAILG 337


>gi|325662851|ref|ZP_08151420.1| ATP synthase subunit beta [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086567|ref|ZP_08335645.1| ATP synthase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470903|gb|EGC74132.1| ATP synthase subunit beta [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330410400|gb|EGG89832.1| ATP synthase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 463

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 159/294 (54%), Gaps = 11/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID  +     D+  E + +  P    Q  E +  +TGI+VID+  P   G
Sbjct: 90  GRIFNVLGEAID--EKPAPTDVEYEPIHRKAPTFEEQATEAEMLETGIKVIDLLCPYQKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +     + + VGER RE  + + E      + K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMTESGVINKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAKV 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           VL+R++ E G YP VDPL S SR+ D     +E   V+  +  ++ +++E +DI
Sbjct: 326 VLSRAITELGIYPAVDPLESSSRMLDPHIVGEEHYNVARGVQEILQKYKELQDI 379


>gi|126701091|ref|YP_001089988.1| F0F1 ATP synthase subunit beta [Clostridium difficile 630]
 gi|254977092|ref|ZP_05273564.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-66c26]
 gi|255094420|ref|ZP_05323898.1| F0F1 ATP synthase subunit beta [Clostridium difficile CIP 107932]
 gi|255102677|ref|ZP_05331654.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-63q42]
 gi|255308498|ref|ZP_05352669.1| F0F1 ATP synthase subunit beta [Clostridium difficile ATCC 43255]
 gi|255316172|ref|ZP_05357755.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-76w55]
 gi|255518833|ref|ZP_05386509.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-97b34]
 gi|255652012|ref|ZP_05398914.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-37x79]
 gi|260684987|ref|YP_003216272.1| F0F1 ATP synthase subunit beta [Clostridium difficile CD196]
 gi|260688645|ref|YP_003219779.1| F0F1 ATP synthase subunit beta [Clostridium difficile R20291]
 gi|306521754|ref|ZP_07408101.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-32g58]
 gi|123066472|sp|Q180W5|ATPB_CLOD6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115252528|emb|CAJ70371.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta ) [Clostridium difficile]
 gi|260211150|emb|CBA66591.1| ATP synthase beta chain [Clostridium difficile CD196]
 gi|260214662|emb|CBE07286.1| ATP synthase beta chain [Clostridium difficile R20291]
          Length = 464

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LGKP+DG  +  K    + I    P     +   +  +TGI+V+D+  P   G
Sbjct: 87  LGRIFNVLGKPVDGKPA-PKSAPKLPIHRPAPAYDELETTAEILETGIKVVDLLAPYLKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      + K+
Sbjct: 146 GKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMSESGVINKT 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE+F   +G +VLL +D+I RF  +  E++   G +
Sbjct: 206 ALVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQDVLLFVDNIFRFTQAGSEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD   
Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++  G YP VDPL S SR+ D +    E  ++   +  ++ R++E +DI  I G
Sbjct: 324 VLSRQISSLGIYPAVDPLESTSRILDPSIVGKEHYEVARGVQSILQRYKELQDIIAILG 382


>gi|356768|prf||1211283A ATPase beta F1
          Length = 473

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID +  +   D   + + +  P       E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGDGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +  S LD
Sbjct: 269 GRMPSAIGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R LAE G YP VDPL S SR LA +    +  ++   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLAEMGIYPAVDPLVSTSRALAPEIVGEEHYQVARKVQQTLERYKELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + D+    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|254497050|ref|ZP_05109876.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12]
 gi|254353721|gb|EET12430.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12]
          Length = 380

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 163/304 (53%), Gaps = 11/304 (3%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151
            +I  S    GR++N  G+P+DG + L K +   +I +K P  +    +E+G  +TGI+ 
Sbjct: 1   MQIPVSPDCLGRLLNIFGEPLDGGEPL-KTNEYRDIFAK-PSPIEMTTIEQGILETGIKA 58

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIED 208
           ID+  P   G +IG+F G+G+GK+ LL  F  +       IS+   +GER RE  E   +
Sbjct: 59  IDLLCPFIRGSKIGLFGGAGVGKTILLMEFMHAIIQLHQGISVFAGIGERIREGHELWHE 118

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
                 + K+++V    DESP +R  A L+A++ AEY   +    VL ++D+I RF  + 
Sbjct: 119 MKSAGVMDKTLMVFGQMDESPGVRFRAGLSALSYAEYLRDTVAHEVLFLVDNIYRFVQAG 178

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P   GY  ++ +E+  + ERI  +   KG +T+V +V V  D+ +DP   
Sbjct: 179 SEISGLLGRMPANVGYQPTLMTEIAEIEERI--TSTSKGAVTSVQAVYVPADDMSDPAVT 236

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEE 385
            + + LD  +VL+RS A +G YP VDPL S S+  DK    A    +  ++   + R+ E
Sbjct: 237 GIITHLDSIVVLSRSQAGKGIYPAVDPLGSKSKFMDKVVLGARHYSVAQAVREHLARYRE 296

Query: 386 TRDI 389
             DI
Sbjct: 297 LEDI 300


>gi|254470785|ref|ZP_05084188.1| ATP synthase F1, beta subunit [Pseudovibrio sp. JE062]
 gi|211959927|gb|EEA95124.1| ATP synthase F1, beta subunit [Pseudovibrio sp. JE062]
          Length = 475

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + + D    I  + P  + +    +   TGI+V+D+  P   G
Sbjct: 88  LGRIMNVIGEPVDEAGPI-EHDAKRGIHQEAPAFVEQSTEAEILPTGIKVVDLIAPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKE 205

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +TIAE F  KG +VL  +D+I RF  +  E+
Sbjct: 206 KGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQAGAEV 265

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP   S  
Sbjct: 266 SALLGRIPSAVGYQPTLATDMGGMQERI--TTTSKGSITSVQAVYVPADDLTDPAPASTF 323

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VLNR++AE+G YP VDPL S SR+ D     DE  ++ +++   + R++  +D
Sbjct: 324 AHLDATTVLNRAIAEKGIYPAVDPLDSSSRMLDPRIIGDEHYEVATAVQETLQRYKSLQD 383

Query: 389 IRLIGG 394
           I  I G
Sbjct: 384 IIAILG 389


>gi|169826600|ref|YP_001696758.1| F0F1 ATP synthase subunit beta [Lysinibacillus sphaericus C3-41]
 gi|226740652|sp|B1HM56|ATPB_LYSSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|168991088|gb|ACA38628.1| ATP synthase subunit beta [Lysinibacillus sphaericus C3-41]
          Length = 471

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID  + +        I  + P         +  +TGI+V+D+  P   G
Sbjct: 90  LGRVFNVLGEVIDLGEEIPADARRDSIHREAPTFEELSTTVEILETGIKVVDLLAPYIKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +K++
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 270 PSAVGYQPTLATEMGKLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L+E G YP VDPLAS SR L+ +   A+   + + +   I R+ E +DI  I G
Sbjct: 328 NLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAVATGVQRTIQRYRELQDIIAILG 386


>gi|94468834|gb|ABF18266.1| F0F1-type ATP synthase beta subunit [Aedes aegypti]
          Length = 504

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 167/315 (53%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    + + +LS  I ++ P  ++    ++   TGI+V+
Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQEILVTGIKVV 166

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 226 MIEGGVIPLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 285

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 286 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 343

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 344 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 403

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 404 LQDYKSLQDIIAILG 418


>gi|322492413|emb|CBZ27687.1| putative ATPase beta subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 525

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+  + M I ++ P   ++   +    TGI+VID+  P C G 
Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G NVLL +D+I RF  +  E++ 
Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R++AE G YP V+PL   SR+ D      D   +   +  ++ +++E +DI
Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416


>gi|228994024|ref|ZP_04153925.1| ATP synthase subunit beta [Bacillus pseudomycoides DSM 12442]
 gi|228765672|gb|EEM14325.1| ATP synthase subunit beta [Bacillus pseudomycoides DSM 12442]
          Length = 464

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 165/304 (54%), Gaps = 14/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 83  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 141 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 199

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 200 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 259

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 260 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 317

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 318 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 377

Query: 391 LIGG 394
            I G
Sbjct: 378 AILG 381


>gi|157870644|ref|XP_001683872.1| ATPase beta subunit [Leishmania major strain Friedlin]
 gi|68126939|emb|CAJ05181.1| putative ATPase beta subunit [Leishmania major strain Friedlin]
          Length = 525

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+  + M I ++ P   ++   +    TGI+VID+  P C G 
Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G NVLL +D+I RF  +  E++ 
Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R++AE G YP V+PL   SR+ D      D   +   +  ++ +++E +DI
Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416


>gi|291520260|emb|CBK75481.1| ATP synthase F1 subcomplex beta subunit [Butyrivibrio fibrisolvens
           16/4]
          Length = 464

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 9/316 (2%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+V       +       GR+ N LG+ ID +     G   M I  K P    +    + 
Sbjct: 71  DVVATGAPISVPVGEATLGRIFNVLGEAID-EQPAPTGVEKMPIHRKAPAFEEQATSTEM 129

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE
Sbjct: 130 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTRE 189

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSI 259
             + + E      + K+ +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I
Sbjct: 190 GNDLYYEMKESGVIDKTCMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNI 249

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+
Sbjct: 250 FRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADD 307

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL RS+AE G YP VDPL S SR+ D      E   V+  +  
Sbjct: 308 LTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHFTVARGVQE 367

Query: 379 LIHRFEETRDIRLIGG 394
           ++ +++E +DI  I G
Sbjct: 368 ILQKYKELQDIIAILG 383


>gi|85712587|ref|ZP_01043634.1| ATP synthase subunit B [Idiomarina baltica OS145]
 gi|85693578|gb|EAQ31529.1| ATP synthase subunit B [Idiomarina baltica OS145]
          Length = 461

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +  M I    P    +       +TGI+VID+  P   G
Sbjct: 86  LGRIMNVLGQPIDEAGPIGEEE-RMSIHRAAPTYEEQSNTSDLLETGIKVIDLICPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           LNR +A  G YP VDPL S SR  D     +E       +  ++ R++E +DI  I G
Sbjct: 323 LNRDIASLGIYPAVDPLDSTSRQLDPLVIGEEHYDTAMGVQEVLQRYKELKDIIAILG 380


>gi|163942993|ref|YP_001647877.1| F0F1 ATP synthase subunit beta [Bacillus weihenstephanensis KBAB4]
 gi|226739980|sp|A9VSA3|ATPB_BACWK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|163865190|gb|ABY46249.1| ATP synthase F1, beta subunit [Bacillus weihenstephanensis KBAB4]
          Length = 469

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  VTLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|301168587|emb|CBW28177.1| ATP synthase beta chain [Bacteriovorax marinus SJ]
          Length = 479

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 162/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN  G+PID   S+G  + S +I    P   ++   ++ F TGI+VID+  P   G 
Sbjct: 100 GRIINVTGQPIDERGSIGNKE-SSDIHRDAPTFEDQSTTKEPFFTGIKVIDLLAPYLKGG 158

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE R+  ++      + K
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIATQHGGFS--VFAGVGERTREGRDLYDEMSESGVIDK 216

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +  +VL  +D+I RF  +  E++   G 
Sbjct: 217 TALVYGQMNEPPGARARVALTGLTVAEYFRDVEKQDVLFFVDNIFRFTQAGSEVSALLGR 276

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  + ERI  +  + G+IT++ +V V  D++ DP   +  + LD  
Sbjct: 277 IPSAVGYQPTLSTEMGAMQERI--TSTKDGSITSIQAVYVPADDYTDPAPATTFAHLDAT 334

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+R++AE G YP VDPL S S +       DE      ++  ++ R++E +DI  I G
Sbjct: 335 TELSRAIAEIGIYPAVDPLTSSSTILSAEVLGDEHYNTARAVQEILQRYKELQDIIAILG 394


>gi|261366298|ref|ZP_05979181.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
 gi|282571896|gb|EFB77431.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
          Length = 465

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 20/329 (6%)

Query: 78  GEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVP 133
           GE +  GD V   G    +P      GR+ N LG+PID      KG +       + + P
Sbjct: 61  GEGLGRGDEVIATGHTIETPVGEATLGRMFNVLGEPIDE-----KGPVETPEKWSIHRDP 115

Query: 134 PAMNRQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--- 189
           PA ++Q    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    
Sbjct: 116 PAFDKQSPTTEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGY 175

Query: 190 VIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            I + VGER RE  +   + +G++  L K+ +V    +E P  R    LT +T+AEYF  
Sbjct: 176 SIFTGVGERTREGNDLWRE-MGESGVLSKTALVFGQMNEPPGARMRVALTGLTMAEYFRD 234

Query: 248 K-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   NVLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G 
Sbjct: 235 RQKQNVLLFIDNIFRYVQAGSEVSALMGRMPSAVGYQPTLADEVGALQERI--TSTKDGA 292

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  S LD   VL+R + E+G YP VDPL S SR+ +    
Sbjct: 293 ITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRKIVEQGIYPAVDPLESTSRILEPDIV 352

Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                ++      L+ R+ + +DI  I G
Sbjct: 353 GRRHYEIARGAQELLQRYRDLQDIIAILG 381


>gi|114571|sp|P07677|ATPB_BACP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77453|pir||A25504 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           thermophilic bacterium PS-3
 gi|2981977|pdb|1SKY|E Chain E, Crystal Structure Of The Nucleotide Free Alpha3beta3 Sub-
           Complex Of F1-Atpase From The Thermophilic Bacillus Ps3
 gi|45804|emb|CAA28277.1| unnamed protein product [Bacillus sp. PS3]
 gi|45817|emb|CAA30655.1| unnamed protein product [Bacillus sp. PS3]
 gi|217147|dbj|BAA00066.1| thermophilic proton ATPase beta subunit [Bacillus sp. PS3]
          Length = 473

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 171/331 (51%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID +  +   D   + + +  P       E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G + LL +D+I RF  +  E++   
Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDGLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +  S LD
Sbjct: 269 GRMPSAIGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R LAE G YP VDPL S SR LA +    +  ++   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLAEMGIYPAVDPLVSTSRALAPEIVGEEHYQVARKVQQTLERYKELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + D+    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|307720697|ref|YP_003891837.1| ATP synthase F1 subcomplex subunit beta [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978790|gb|ADN08825.1| ATP synthase F1 subcomplex beta subunit [Sulfurimonas autotrophica
           DSM 16294]
          Length = 464

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N +G+ IDG + +   D     + + PPA+ ++    + F+TGI+V+D+  P   
Sbjct: 87  LGRIFNVIGETIDGGEQVS--DAPTWSIHREPPALVDQSTTTEMFETGIKVVDLLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++     +       +S+   VGER RE  +   +    N L K
Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAHGHEGLSVFAGVGERTREGNDLYYEMKESNVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
             +      E P  R    LT +T+AEYF   K  +VL+ +D+I RFA S  E++   G 
Sbjct: 205 VALCYGQMSEPPGARNRIALTGLTMAEYFRDEKKLDVLMFIDNIFRFAQSGSEMSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L +RI  +  + G+IT+V +V V  D+  DP   SV + LD  
Sbjct: 265 IPSAVGYQPTLAREMGALQDRI--TSTKDGSITSVQAVYVPADDLTDPAPASVFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            VLNR +AE+G YP VDPL S SRL D     +E   V+  +   + ++++ +DI  I G
Sbjct: 323 TVLNRKIAEKGIYPAVDPLDSTSRLLDPQILGEEHYNVARGVQQTLQKYKDLQDIIAILG 382


>gi|163850895|ref|YP_001638938.1| F0F1 ATP synthase subunit beta [Methylobacterium extorquens PA1]
 gi|218529719|ref|YP_002420535.1| F0F1 ATP synthase subunit beta [Methylobacterium chloromethanicum
           CM4]
 gi|240138026|ref|YP_002962498.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           AM1]
 gi|254560587|ref|YP_003067682.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           DM4]
 gi|163662500|gb|ABY29867.1| ATP synthase F1, beta subunit [Methylobacterium extorquens PA1]
 gi|218522022|gb|ACK82607.1| ATP synthase F1, beta subunit [Methylobacterium chloromethanicum
           CM4]
 gi|240007995|gb|ACS39221.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           AM1]
 gi|254267865|emb|CAX23731.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           DM4]
          Length = 485

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 160/311 (51%), Gaps = 24/311 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    + + D    I    PP  ++    +   TGI+V+D+  P   G 
Sbjct: 96  GRIMNVIGEPIDEAGPI-QSDTLRAIHQPAPPYTDQSTESQILVTGIKVVDLLAPYAKGG 154

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYLGDN 213
           +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +  N
Sbjct: 155 KIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNVNKN 212

Query: 214 LK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
            K         K  +V    +ESP  R    LT +TIAE F  +G +VL  +D+I RF  
Sbjct: 213 PKENGGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEDFRDQGQDVLFFVDNIFRFTQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 273 AGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD    L+RS+AE+G YP VDPL S SR+   A   +E  ++   +   + R+
Sbjct: 331 PAASFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPAILGEEHYEVARKVQQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 391 KSLQDIIAILG 401


>gi|114800518|ref|YP_760593.1| F0F1 ATP synthase subunit beta [Hyphomonas neptunium ATCC 15444]
 gi|123128756|sp|Q0C100|ATPB_HYPNA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114740692|gb|ABI78817.1| ATP synthase F1, beta subunit [Hyphomonas neptunium ATCC 15444]
          Length = 475

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 162/306 (52%), Gaps = 14/306 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +   D  M I ++ P  +++    +   TGI+VID+  P  
Sbjct: 87  ATLGRIMNVIGEPIDERGPV-NADTYMPIHAQAPAFVDQATESEVLVTGIKVIDLLCPYA 145

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+       +  F    + + VGER RE  +   + +  N+  
Sbjct: 146 KGGKIGLFGGAGVGKTVLIMELVNNIAKLFGGYSVFAGVGERTREGNDLYHEMIESNVIN 205

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                +  +V    +E P  R    LT +T AEYF   +G +VL  +D+I RF  +  E+
Sbjct: 206 LEGESRMSLVYGQMNEPPGARARVALTGLTQAEYFRDVEGKDVLFFVDNIFRFTQAGSEV 265

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +  
Sbjct: 266 SALLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATSF 323

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VLNR+++E+G YP VDPL S SR+ D     +E  ++   +  ++ +++E +D
Sbjct: 324 AHLDATTVLNRAISEKGIYPAVDPLDSTSRILDPMVVGEEHYEVARGVQQILQKYKELQD 383

Query: 389 IRLIGG 394
           I  I G
Sbjct: 384 IIAILG 389


>gi|303239773|ref|ZP_07326297.1| ATP synthase F1, beta subunit [Acetivibrio cellulolyticus CD2]
 gi|302592710|gb|EFL62434.1| ATP synthase F1, beta subunit [Acetivibrio cellulolyticus CD2]
          Length = 464

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG P+D    + K +  + I    P   + +   +  +TGI+V+D+  P   G
Sbjct: 87  LGRLFNVLGDPVDNMGEV-KTEKRLPIHRPAPVLEDLKPATEILETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   D + D+  ++K
Sbjct: 146 GKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGERTREGNDLWND-MNDSGVIEK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF  + G +VLL +D+I RF  +  E++   G 
Sbjct: 205 TALVFGQMNEPPGSRMRVGLSGLTMAEYFRDEMGQDVLLFIDNIFRFVQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD  
Sbjct: 265 VPSAVGYQPTLATDVGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ D +   +E  K+   +  ++ R++E +DI  I G
Sbjct: 323 TVLSRQIVEQGIYPAVDPLDSTSRVLDPSVVGEEHYKVARRVQEILQRYKELQDIIAILG 382


>gi|150388193|ref|YP_001318242.1| F0F1 ATP synthase subunit beta [Alkaliphilus metalliredigens QYMF]
 gi|172052470|sp|A6TK65|ATPB_ALKMQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149948055|gb|ABR46583.1| ATP synthase F1, beta subunit [Alkaliphilus metalliredigens QYMF]
          Length = 464

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D    + +  + + I  + P    ++   + F+TGI+V+D+  P   G
Sbjct: 88  LGRIFNVLGEVVDEGKPV-EAKMHLPIHREAPSFEEQEAATEIFETGIKVVDLIAPYARG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + +    + K+
Sbjct: 147 GKVGLFGGAGVGKTVLIMELINNIAKEHGGLSVFAGVGERTREGNDLYHEMIESGVIDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 SLVYGQMNEPPGARMRVGLTGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++E G YP VDPL S SR+ D A    E  ++   +  ++ R++E +DI  I G
Sbjct: 325 VLSRQISELGIYPAVDPLDSNSRILDPATVGQEHYEVARGVQEVLQRYKELQDIIAILG 383


>gi|218282096|ref|ZP_03488395.1| hypothetical protein EUBIFOR_00970 [Eubacterium biforme DSM 3989]
 gi|218216889|gb|EEC90427.1| hypothetical protein EUBIFOR_00970 [Eubacterium biforme DSM 3989]
          Length = 466

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 164/300 (54%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N LGKPIDG   LG  D  +M I  K P    +    +  +TGI+VID+  P   
Sbjct: 88  LGRMFNVLGKPIDG---LGDVDANTMPIHRKAPAFDEQSTTSEPLETGIKVIDLLCPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +   K ++  VGER RE  +   +      L K
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVVGVGERTREGNDMYHEMKDSGVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +ESP  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G 
Sbjct: 205 TVLVYGQMNESPGARMRVGLTGLTMAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  S LD  
Sbjct: 265 VPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPATTFSHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +A  G YP VDPL S SR+ D     ++  K+   + +++ R+++ +DI  I G
Sbjct: 323 TVLDRDIAALGIYPAVDPLESSSRILDPLVVGEKHYKVARGVQNILQRYKDLQDIIAILG 382


>gi|160914778|ref|ZP_02076992.1| hypothetical protein EUBDOL_00785 [Eubacterium dolichum DSM 3991]
 gi|158433318|gb|EDP11607.1| hypothetical protein EUBDOL_00785 [Eubacterium dolichum DSM 3991]
          Length = 466

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
           GR+ N LG+ IDG   LGK + + ++ + +  P  + Q+   +  +TGI+VID+  P   
Sbjct: 89  GRMFNVLGREIDG---LGKVEAATKLPIHRAAPTFDEQQTSAEMLETGIKVIDLLCPYAK 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +     +++ VGER RE  +   +      L K
Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVVTGVGERTREGNDMYHEMKDSGVLDK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +ESP  R    LT +T+AE+F      +VLL +D+I RF  +  E++   G 
Sbjct: 206 TVLVYGQMNESPGARMRVGLTGLTMAEHFRDHDHQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKNGSITSVQAIYVPADDLTDPAPATAFTHLDAK 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +A  G YP VDPL S SR+ D     +E  ++   +  ++ R++E +DI  I G
Sbjct: 324 TVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQEILQRYKELQDIIAILG 383


>gi|315221776|ref|ZP_07863690.1| ATP synthase F1, beta subunit [Streptococcus anginosus F0211]
 gi|319939415|ref|ZP_08013775.1| ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV]
 gi|315189162|gb|EFU22863.1| ATP synthase F1, beta subunit [Streptococcus anginosus F0211]
 gi|319811401|gb|EFW07696.1| ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV]
          Length = 468

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +   G+      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFGEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|317052409|ref|YP_004113525.1| ATP synthase F1 subunit beta [Desulfurispirillum indicum S5]
 gi|316947493|gb|ADU66969.1| ATP synthase F1, beta subunit [Desulfurispirillum indicum S5]
          Length = 466

 Score =  149 bits (377), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 159/300 (53%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D  + +   +    I  + P  +++       +TGI+V+D+  P  
Sbjct: 83  ATLGRILNVIGEPVDEGEPV-NAEEYWSIHREAPSFVDQDTQSTMLETGIKVVDLLCPYA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + 
Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFAGVGERTREGNDLYHEMKDSGVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K+ +V    +E P  R    L+ +TIAE F   G +VLL +D+I RF  +  E++   G 
Sbjct: 202 KAALVYGQMNEPPGARMRVALSGLTIAENFREDGLDVLLFVDNIFRFTQAGSEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLSTEMGNLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            VLNRS+AE G YP VDPL S SR+ +      D   +  ++ +++ R++  +DI  I G
Sbjct: 320 TVLNRSIAELGIYPAVDPLDSTSRILEPGVVGQDHYHVARAVQNILQRYKALQDIIAILG 379


>gi|284046066|ref|YP_003396406.1| ATP synthase F1 subunit beta [Conexibacter woesei DSM 14684]
 gi|283950287|gb|ADB53031.1| ATP synthase F1, beta subunit [Conexibacter woesei DSM 14684]
          Length = 470

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 164/302 (54%), Gaps = 12/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID     G  D+     I +  P   +     + F+TGI+VID+  P
Sbjct: 93  ATLGRIFNVLGEPID---LAGPVDVQERRPIHAAAPNVEDLTPTTEMFETGIKVIDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G ++G+F G+G+GK+ L+     +   +   +S    VGER RE  + ++E      
Sbjct: 150 YAKGGKVGLFGGAGVGKTVLIQELIDNLAREHGGLSAFCGVGERSREGNDLWLEMKESGT 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K+++V    +E P  R    L+ +T+AEYF  +G +VLL +D+I RF  +  E++   
Sbjct: 210 IDKTMLVFGQMNEPPGARMRVALSGLTMAEYFRDEGQDVLLFIDNIFRFVQAGSEVSALL 269

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P   GY  ++ SE+ +L ERI  +   +G++T+V +V V  D+  DP   SV + L+
Sbjct: 270 GRMPSQVGYQPTLESEMGQLQERI--TSTRQGSVTSVQAVYVPADDLTDPAPASVFAHLN 327

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLI 392
              VL+RS++E+G YP VDPL S S +       +E   V++ +  ++ R++E +DI  I
Sbjct: 328 ATTVLSRSISEKGIYPAVDPLDSTSTILKPDILGEEHYAVANEVKQILQRYKELQDIIAI 387

Query: 393 GG 394
            G
Sbjct: 388 LG 389


>gi|112791410|gb|ABI21975.1| ATP synthase beta subunit [Erwinia psidii]
          Length = 421

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 159/304 (52%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E  ++   +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYEVARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|225572845|ref|ZP_03781600.1| hypothetical protein RUMHYD_01036 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039771|gb|EEG50017.1| hypothetical protein RUMHYD_01036 [Blautia hydrogenotrophica DSM
           10507]
          Length = 465

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ IDG + L   +   EI  + P    +  V +  +TGI+VID+  P   G 
Sbjct: 86  GRLFNVLGQTIDGKEPLDNAE-HWEIHREPPTFEEQSPVVEILETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+    ++   +     I + VGER RE  + + E      +KK+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWTEMSESGVIKKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF  K   +VLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDKENQDVLLFIDNIFRFVQAGSEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLANEMGALQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R + E+G YP VDPL S SR+ +     +E  +    +  ++ +++E +DI  I G
Sbjct: 323 LSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYETARKVQEILQKYKELQDIIAILG 380


>gi|241888675|ref|ZP_04775982.1| ATP synthase F1, beta subunit [Gemella haemolysans ATCC 10379]
 gi|241864698|gb|EER69073.1| ATP synthase F1, beta subunit [Gemella haemolysans ATCC 10379]
          Length = 471

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 162/300 (54%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ +D  +  G  ++  + + K  P  +      +  +TGI+VID+  P   
Sbjct: 90  LGRVFNVLGEAVDHGEEAG-AEVRKDSIHKEAPTFDELSTHVEVLETGIKVIDLLAPYIK 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      + K
Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINK 208

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 209 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 268

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 269 MPSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 326

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R+L E G YP VDPLAS SR LA +    +  ++ +++   + ++ E +DI  I G
Sbjct: 327 TNLERALTEMGIYPAVDPLASTSRALAPEIVGEEHYQVATTIQRTLQKYRELQDIIAILG 386


>gi|46909261|gb|AAT06148.1| ATP synthase beta subunit [Mytilus edulis]
          Length = 427

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G PID    +   D  + I ++ P  ++    ++  +TGI+V+
Sbjct: 55  IRIPVGPATLGRIINVVGDPIDERGPVNT-DKYLSIHAEAPDFVDMSVTQEVLETGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
                   L D+  K  +V    +E P  R    LT +T+AEYF   +G NVLL +D+I 
Sbjct: 173 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQNVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRILDPYVVGEEHYTVARNVQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 351 LQNYKSLQDIIAILG 365


>gi|291521850|emb|CBK80143.1| ATP synthase F1 subcomplex beta subunit [Coprococcus catus GD/7]
          Length = 466

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 173/337 (51%), Gaps = 14/337 (4%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGI 149
           G  ++       GR+ N  G+ IDG + L   D+    + + PPA   Q  V +  +TGI
Sbjct: 74  GGIKVPVGEQTLGRLFNVTGETIDGGEELK--DVEKWSIHRDPPAFEDQNPVAEVLETGI 131

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +  
Sbjct: 132 KVIDLLAPYARGGKIGLFGGAGVGKTVLIQELIRNIAAEHGGYSIFTGVGERSREGNDLW 191

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
            +      L+K+ +V    +E P  R     T +T+AEYF  +   NVLL +D+I RF+ 
Sbjct: 192 SEMKASGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHRNVLLFIDNIFRFSQ 251

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++   G +T+V +V V  D+  DP 
Sbjct: 252 AGSEVSALLGRMPSAVGYQPTLATEMGELQERIASTKN--GAVTSVQAVYVPADDLTDPA 309

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++  +
Sbjct: 310 PATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEPDIVGEEHYEVARKVQEILQSY 369

Query: 384 EETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQ 419
           ++ +DI  I G     D   DK  V++   I  FL Q
Sbjct: 370 KDLQDIIAILGMEELSD--EDKITVYRARKIQKFLSQ 404


>gi|260586964|ref|ZP_05852877.1| ATP synthase F1, beta subunit [Blautia hansenii DSM 20583]
 gi|260542648|gb|EEX23217.1| ATP synthase F1, beta subunit [Blautia hansenii DSM 20583]
          Length = 462

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+ ID  + L   D    ++ + PPA + Q  V +  +TGI+VID+  P   
Sbjct: 85  LGRLFNVLGETIDKGEQLD--DAEHWVIHRDPPAFDEQSPVVEILETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L+K
Sbjct: 143 GGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF  K   NVLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +      E  ++   +   + +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESSSRILEADVVGQEHYEVARKVQEYLQKYKELQDIIAILG 380


>gi|229000091|ref|ZP_04159661.1| ATP synthase subunit beta [Bacillus mycoides Rock3-17]
 gi|229007611|ref|ZP_04165205.1| ATP synthase subunit beta [Bacillus mycoides Rock1-4]
 gi|228753622|gb|EEM03066.1| ATP synthase subunit beta [Bacillus mycoides Rock1-4]
 gi|228759628|gb|EEM08604.1| ATP synthase subunit beta [Bacillus mycoides Rock3-17]
          Length = 455

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 165/304 (54%), Gaps = 14/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 74  ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 131

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 132 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 190

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 191 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 250

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 251 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 308

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI 
Sbjct: 309 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 368

Query: 391 LIGG 394
            I G
Sbjct: 369 AILG 372


>gi|116490723|ref|YP_810267.1| F0F1 ATP synthase subunit beta [Oenococcus oeni PSU-1]
 gi|116091448|gb|ABJ56602.1| ATP synthase F1 subcomplex beta subunit [Oenococcus oeni PSU-1]
          Length = 504

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+DG D +        I    P         +  +TGI+VID+  P  
Sbjct: 123 ATLGRVFNVLGEPVDGGDPIPNSVDRHPIHRSAPKYDELATSTEVLETGIKVIDLLEPYL 182

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G + G+F G+G+GK+ L+     +       IS+   VGER RE  + + E      LK
Sbjct: 183 RGGKTGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLK 242

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
            + +V    +E P  R    LT +T+AE F   +G +VLL +D+I RF  +  E++   G
Sbjct: 243 NTAMVYGQMNEPPGARMRVGLTGLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLG 302

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 303 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 360

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
              L RSL ++G YP VDPL S S  L       D  ++ + + H + R++E +DI
Sbjct: 361 TTNLERSLTQQGIYPAVDPLESTSSALTPDIVGEDHYEVATQVQHFLQRYKELQDI 416


>gi|322387993|ref|ZP_08061600.1| ATP synthase F1 sector beta subunit [Streptococcus infantis ATCC
           700779]
 gi|321141266|gb|EFX36764.1| ATP synthase F1 sector beta subunit [Streptococcus infantis ATCC
           700779]
          Length = 468

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +   G+      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFGEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|317121018|ref|YP_004101021.1| ATP synthase F1 subcomplex subunit beta [Thermaerobacter
           marianensis DSM 12885]
 gi|315590998|gb|ADU50294.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 469

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PIDG +   +      I    P   +     +  +TGI+VID+  P   G
Sbjct: 92  LGRMFNVLGEPIDGKEP-PQAKKRYPIHRPAPDVADVNPATEILETGIKVIDLICPFARG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  +   +      L K+
Sbjct: 151 GKVGLFGGAGVGKTVIIMELIHNIAYKHGGFSVFAGVGERTREGNDLYHELKESGVLDKT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT + +AEYF   +G ++LL +D+I RF  +  E++   G +
Sbjct: 211 ALVFGQMNEPPGARLRVGLTGLAMAEYFRDEEGQDLLLFIDNIFRFTQAGSEVSALLGRM 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D++ DP   +  + LD  +
Sbjct: 271 PSAVGYQPTLATEMGNLQERI--TTTRKGSITSVQAVYVPADDYTDPAPVTTFAHLDSTV 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L R++AE G YP VDPLAS SR+ D      E  ++   +  ++ R+++ +DI  I G
Sbjct: 329 RLERAIAERGIYPAVDPLASTSRILDPNIVGQEHYEVARGVQQVLQRYKDLQDIIAILG 387


>gi|290890142|ref|ZP_06553224.1| hypothetical protein AWRIB429_0614 [Oenococcus oeni AWRIB429]
 gi|21684964|emb|CAD22547.1| F1F0-ATPase subunit beta [Oenococcus oeni]
 gi|290480186|gb|EFD88828.1| hypothetical protein AWRIB429_0614 [Oenococcus oeni AWRIB429]
          Length = 504

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+DG D +        I    P         +  +TGI+VID+  P  
Sbjct: 123 ATLGRVFNVLGEPVDGGDPIPNSVDRHPIHRSAPKYDELATSAEVLETGIKVIDLLEPYL 182

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G + G+F G+G+GK+ L+     +       IS+   VGER RE  + + E      LK
Sbjct: 183 RGGKTGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLK 242

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
            + +V    +E P  R    LT +T+AE F   +G +VLL +D+I RF  +  E++   G
Sbjct: 243 NTAMVYGQMNEPPGARMRVGLTGLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLG 302

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 303 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 360

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
              L RSL ++G YP VDPL S S  L       D  ++ + + H + R++E +DI
Sbjct: 361 TTNLERSLTQQGIYPAVDPLESTSSALTPDIVGEDHYEVATQVQHFLQRYKELQDI 416


>gi|224477091|ref|YP_002634697.1| F0F1 ATP synthase subunit beta [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254808164|sp|B9DME3|ATPB_STACT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222421698|emb|CAL28512.1| ATP synthase beta chain [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 471

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 173/336 (51%), Gaps = 13/336 (3%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D+V    +   + I  GD V   GR   +       GRV N LG PID    + +  +  
Sbjct: 55  DVVRTIAMDSTDGIKRGDDVKDTGRPISVPVGDDTLGRVFNVLGDPIDNAGPIPES-VPR 113

Query: 127 EIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           E + + PP  +    +VE   +TGI+V+D+  P   G ++G+F G+G+GK+ L+     +
Sbjct: 114 EPIHRQPPPFDELSTKVEI-LETGIKVVDLLAPYIKGGKVGLFGGAGVGKTVLIQELINN 172

Query: 185 DCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
              +   IS+   VGER RE  + + E      +KK+ +V    +E P  R    L+ +T
Sbjct: 173 IAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLT 232

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF   KG +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  
Sbjct: 233 MAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI-- 290

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +   KG+IT++ +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR
Sbjct: 291 TSTMKGSITSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSR 350

Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             + +    E   V+  +   + ++ E +DI  I G
Sbjct: 351 ALEPSIVGQEHYDVARRVQATLQKYRELQDIIAILG 386


>gi|58699169|ref|ZP_00373988.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534317|gb|EAL58497.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 418

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 176/337 (52%), Gaps = 28/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   
Sbjct: 29  LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 87

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
           G +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+ 
Sbjct: 88  GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 145

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266
                   ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  + 
Sbjct: 146 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 205

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   
Sbjct: 206 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 263

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  S LD   VL+R +AE G YP VDPL S S+ L+ +    +  K+ S +  ++  ++ 
Sbjct: 264 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYKVASEVKRILQTYKS 323

Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419
            +DI  I G     D   +I+D+A      I  FL Q
Sbjct: 324 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 356


>gi|304320615|ref|YP_003854258.1| ATP synthase subunit B [Parvularcula bermudensis HTCC2503]
 gi|303299517|gb|ADM09116.1| ATP synthase subunit B [Parvularcula bermudensis HTCC2503]
          Length = 474

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 171/335 (51%), Gaps = 24/335 (7%)

Query: 79  EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G LV   G   + P      GR++N +G+PID    + + + +  I    PP + 
Sbjct: 60  EGLVRGHLVTDTGEPIMVPVGEATLGRIMNVIGEPIDEAGPI-EAEGTRAIHQAAPPFVE 118

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----II 192
           +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    KV     + 
Sbjct: 119 QSTEAEVLVTGIKVVDLLCPYPRGGKIGLFGGAGVGKTVLIQELINN--IAKVHGGYSVF 176

Query: 193 SLVGERGREVREFIEDYLGDNLK------------KSVVVVATSDESPILRKMAPLTAVT 240
           + VGER RE  +   + +  N+             K+ +V    +E P  R    LT +T
Sbjct: 177 AGVGERTREGNDLYWEMIESNVNVDPQKNGSAAGSKASLVYGQMNEPPGARARVALTGLT 236

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 237 VAEHFRDQGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              KG+IT++ +V V  D+  DP   +  + LD    LNRS+AE+G YP VDPL S SR+
Sbjct: 295 TTTKGSITSIQAVYVPADDLTDPAPATSFAHLDATTTLNRSIAEKGIYPAVDPLDSTSRI 354

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            D     +E  ++   + +++ R++  +DI  I G
Sbjct: 355 LDPRIVGEEHYEVARGVQNILQRYKSLQDIIAILG 389


>gi|238917402|ref|YP_002930919.1| F-type H+-transporting ATPase beta chain [Eubacterium eligens ATCC
           27750]
 gi|238872762|gb|ACR72472.1| F-type H+-transporting ATPase beta chain [Eubacterium eligens ATCC
           27750]
          Length = 470

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 168/324 (51%), Gaps = 12/324 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ IDG +     +   EI  + P    +   E+  +TGI+VID+  P   G 
Sbjct: 94  GRLFNVLGEAIDGKEQ-PDAEEKWEIHREPPTFEEQNPAEEILETGIKVIDLLAPYAKGG 152

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +   +     I + VGER RE  + + E      L+K+ 
Sbjct: 153 KIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEKTA 212

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   K  NVLL +D+I RF  +  E++   G +P
Sbjct: 213 LVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSALLGRMP 272

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 273 SAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 330

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I G  
Sbjct: 331 LSRKIVEQGIYPAVDPLDSTSRILEPDIVGEEHYEVARKVQEILQKYKELQDIIAILGME 390

Query: 397 PGVDLILDK-AVHQVPIIYDFLKQ 419
              D   DK  V +   I  FL Q
Sbjct: 391 ELAD--EDKVTVFRARKIQKFLSQ 412


>gi|270307927|ref|YP_003329985.1| ATP synthase F1, beta subunit [Dehalococcoides sp. VS]
 gi|270153819|gb|ACZ61657.1| ATP synthase F1, beta subunit [Dehalococcoides sp. VS]
          Length = 464

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + K + +M I    P     +   +  +TG++VID+  P   G
Sbjct: 85  LGRIFNVLGEPLDNRGDV-KSEKTMPIHRSAPAMDELESSAQVLETGLKVIDLIAPFARG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG   G+G+GK+ L+    R+   +    S+   VGER RE  +   +      L K+
Sbjct: 144 GKIGALGGAGVGKTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEMEDSGVLPKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P +R    LT +T+AEYF   +  +VLL +D+I R+  +  E++   G +
Sbjct: 204 TMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +++  G+IT+  +V V  D++ DP   +    LD  I
Sbjct: 264 PSAVGYQPTLATEMGALQERIASTKQ--GSITSFQAVYVPADDYTDPGVVATFGHLDAMI 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L RSLAE+  YP VDPLAS SR+ D     +E  K+   +  ++ R+++ +D+  I G
Sbjct: 322 ALERSLAEQALYPAVDPLASNSRILDPQVVGEEHYKVARDVQKVLQRYKDLQDVIAILG 380


>gi|225630028|ref|YP_002726819.1| ATP synthase F1, beta subunit [Wolbachia sp. wRi]
 gi|254808174|sp|C0R5I6|ATPB_WOLWR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|225592009|gb|ACN95028.1| ATP synthase F1, beta subunit [Wolbachia sp. wRi]
          Length = 475

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 176/337 (52%), Gaps = 28/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   
Sbjct: 86  LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 144

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
           G +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+ 
Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 202

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266
                   ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  + 
Sbjct: 203 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 262

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   
Sbjct: 263 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 320

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  S LD   VL+R +AE G YP VDPL S S+ L+ +    +  K+ S +  ++  ++ 
Sbjct: 321 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYKVASEVKRILQTYKS 380

Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419
            +DI  I G     D   +I+D+A      I  FL Q
Sbjct: 381 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413


>gi|299135452|ref|ZP_07028642.1| ATP synthase F1, beta subunit [Afipia sp. 1NLS2]
 gi|298589860|gb|EFI50065.1| ATP synthase F1, beta subunit [Afipia sp. 1NLS2]
          Length = 476

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+P+D    + K + +  I  + P    +    +   TGI+V+D+  P   G 
Sbjct: 90  GRIINVIGEPVDEGGPV-KAEGTRAIHQEAPAYTEQSTDAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211
           +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +    G
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    L+ +TIAE F  KG +VL  +D+I RF  +  E++ 
Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTIAEDFRDKGQDVLFFVDNIFRFTQAGSEVSA 268

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +++  L ERI  +   KG+IT++ ++ V  D+  DP   +  + 
Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSIQAIYVPADDLTDPAPATSFAH 326

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD    LNRS+AE+G YP VDPL S SR+       DE   V+  +  ++ R++  +DI 
Sbjct: 327 LDATTTLNRSIAEKGIYPAVDPLDSTSRMLSPLVVGDEHYAVARQVQQILQRYKALQDII 386

Query: 391 LIGG 394
            I G
Sbjct: 387 AILG 390


>gi|22537026|ref|NP_687877.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae 2603V/R]
 gi|76786779|ref|YP_329608.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae A909]
 gi|76799295|ref|ZP_00781462.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 18RS21]
 gi|77406467|ref|ZP_00783523.1| ATP synthase F1, beta subunit [Streptococcus agalactiae H36B]
 gi|77407968|ref|ZP_00784718.1| ATP synthase F1, beta subunit [Streptococcus agalactiae COH1]
 gi|77410721|ref|ZP_00787080.1| ATP synthase F1, beta subunit [Streptococcus agalactiae CJB111]
 gi|77414099|ref|ZP_00790267.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 515]
 gi|81845446|sp|Q8E072|ATPB_STRA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573760|sp|Q3K1J5|ATPB_STRA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|22533883|gb|AAM99749.1|AE014231_7 ATP synthase F1, beta subunit [Streptococcus agalactiae 2603V/R]
 gi|76561836|gb|ABA44420.1| ATP synthase F1, beta subunit [Streptococcus agalactiae A909]
 gi|76585355|gb|EAO61946.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 18RS21]
 gi|77159851|gb|EAO70994.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 515]
 gi|77163257|gb|EAO74209.1| ATP synthase F1, beta subunit [Streptococcus agalactiae CJB111]
 gi|77173426|gb|EAO76545.1| ATP synthase F1, beta subunit [Streptococcus agalactiae COH1]
 gi|77174936|gb|EAO77749.1| ATP synthase F1, beta subunit [Streptococcus agalactiae H36B]
 gi|319744882|gb|EFV97216.1| ATP synthase F1 sector beta subunit [Streptococcus agalactiae ATCC
           13813]
          Length = 468

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDAIDLEEPFAEDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        DE  ++ + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALTPEIVGDEHYEVATEVQRVLQRYRELQDIIAILG 385


>gi|197302622|ref|ZP_03167676.1| hypothetical protein RUMLAC_01351 [Ruminococcus lactaris ATCC
           29176]
 gi|197298204|gb|EDY32750.1| hypothetical protein RUMLAC_01351 [Ruminococcus lactaris ATCC
           29176]
          Length = 467

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 170/325 (52%), Gaps = 14/325 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID  + +   D    ++ + PP    Q  V +  +TGI+VID+  P   G
Sbjct: 86  GRLFNVLGETIDNGEPIT--DSKKWVIHREPPTFEEQSPVVEILETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      L K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKASGVLDKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFTQAGSEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R + E+G YP VDPL S SR+ +     +E  ++ + +  ++ +++E +DI  I G 
Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVANKVIAILQKYKELQDIIAILGM 381

Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419
               D   DKA V +   I  FL Q
Sbjct: 382 EELSD--EDKATVMRARKIQRFLSQ 404


>gi|167747404|ref|ZP_02419531.1| hypothetical protein ANACAC_02124 [Anaerostipes caccae DSM 14662]
 gi|317471135|ref|ZP_07930506.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
 gi|167652766|gb|EDR96895.1| hypothetical protein ANACAC_02124 [Anaerostipes caccae DSM 14662]
 gi|316901350|gb|EFV23293.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
          Length = 465

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 167/314 (53%), Gaps = 14/314 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR+ N LG PID  +     +   + + +  PA   Q  E +  +TGI+V+D+  P   G
Sbjct: 90  GRMFNVLGDPID--NKPAPENAKRQPIHRKAPAFKDQSTETEVLETGIKVVDLLCPYQKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMSESGVIDKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAE F  +G  +VLL +D+I RF  +  E++   G +
Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTIAENFRDEGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R++ E+G YP VDPL S SR+ D     +E  ++   +  ++ R++E +DI  I G 
Sbjct: 326 VLSRAIVEQGIYPAVDPLESTSRILDPKIVGEEHYQVARGVQEILQRYKELQDIIAILGM 385

Query: 396 RPGVD---LILDKA 406
               D   LI+D+A
Sbjct: 386 DELSDEEKLIVDRA 399


>gi|154503952|ref|ZP_02041012.1| hypothetical protein RUMGNA_01778 [Ruminococcus gnavus ATCC 29149]
 gi|153795379|gb|EDN77799.1| hypothetical protein RUMGNA_01778 [Ruminococcus gnavus ATCC 29149]
          Length = 464

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 171/325 (52%), Gaps = 14/325 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID  + +   D    ++ + PP    Q  V +  +TGI+VID+  P   G
Sbjct: 86  GRLFNVLGETIDNGEQIE--DAEKWVIHREPPTFEDQSPVVEILETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      L+K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFTQAGSEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R + E+G YP VDPL S SR+ +     +E  ++ + +  ++ +++E +DI  I G 
Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVANKVIAILQKYKELQDIIAILGM 381

Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419
               D   DKA V +   I  FL Q
Sbjct: 382 EELSD--EDKATVMRARKIQRFLSQ 404


>gi|25010936|ref|NP_735331.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae NEM316]
 gi|81845628|sp|Q8E5U8|ATPB_STRA3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|23095315|emb|CAD46525.1| H+-transporting ATP synthase beta chain [Streptococcus agalactiae
           NEM316]
          Length = 468

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDAIDLEEPFAEDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        DE  ++ + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALTPEIVGDEHYEVATEVQRVLQRYRELQDIIAILG 385


>gi|114567888|ref|YP_755042.1| F0F1 ATP synthase subunit beta [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122317245|sp|Q0AUD3|ATPB_SYNWW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114338823|gb|ABI69671.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 476

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    +   D   EI  K P  + +    +  +TGI+V D+  P   G 
Sbjct: 99  GRILNVLGQPVDEAGPVNASDY-WEIHRKPPALVEQLPATQQLETGIKVADLICPYAKGG 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ ++    R+  ++     + + VGER RE  +   +      + K  
Sbjct: 158 KIGLFGGAGVGKTVIIQELIRNIAYEHGGYSVFTGVGERTREGNDLWGEMTESGVIDKCA 217

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++    +E P  R    LT +T+AEYF    G +VL+ +D+I RFA +  E++   G +P
Sbjct: 218 LIFGQMNEPPGARLRVGLTGMTVAEYFRDFSGLDVLIFIDNIFRFAQAGNEVSALLGRMP 277

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +++  L ERI  +   KG+IT+  +V V  D+  DP   +  + LD   V
Sbjct: 278 SAVGYQPTLATDMGYLQERI--TSTRKGSITSAQAVYVPADDLTDPAPATTFAHLDATTV 335

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R+++E G YP VDPL S SR+ D     D+       +  ++ R++E +DI  I G
Sbjct: 336 LSRAISELGIYPAVDPLDSTSRILDPQVVGDKHYDTARGVQKILQRYKELQDIIAILG 393


>gi|116671151|ref|YP_832084.1| F0F1 ATP synthase subunit beta [Arthrobacter sp. FB24]
 gi|190358255|sp|A0JY64|ATPB_ARTS2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116611260|gb|ABK03984.1| ATP synthase F1, beta subunit [Arthrobacter sp. FB24]
          Length = 484

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LGKP+D D+S  +      I  K P     +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHIFNVLGKPLDVDESEIQASDHWAIHRKAPAFATLEGSTEMLETGIKVIDLLTPYIKGG 162

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR+ D  +   D       +  ++ + +E +DI  I G
Sbjct: 341 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 398


>gi|313904303|ref|ZP_07837681.1| ATP synthase F1, beta subunit [Eubacterium cellulosolvens 6]
 gi|313470853|gb|EFR66177.1| ATP synthase F1, beta subunit [Eubacterium cellulosolvens 6]
          Length = 462

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 164/304 (53%), Gaps = 19/304 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+ N LG  ID      KGD++     EI  K P  M+++ V++  +TGI+VID+  P
Sbjct: 85  LGRLFNVLGDTIDN-----KGDITDSEMWEIHRKPPKFMDQKPVQEILETGIKVIDLIAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+ L+    R   S+     I + VGER RE  +   +      
Sbjct: 140 YAKGGKVGLFGGAGVGKTVLIQELIRNVASEHGGYSIFTGVGERSREGNDLWSEMTESGV 199

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +K + +V    +E P  R     T +T+AEYF   +  +VLL +D+I RF  +  E+++ 
Sbjct: 200 IKNTALVFGQMNEPPGSRMRVAETGLTMAEYFRDVQHKDVLLFIDNIFRFVQAGSEVSSL 259

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G++T+V +V V  D+  DP   +  + L
Sbjct: 260 LGRMPSAVGYQPTLANEMGELQERIAST--QEGSVTSVQAVYVPADDLTDPAPATTFAHL 317

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL--ADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           D   VL+R + E+G YP VDPLAS SR+   D    A      + L +L  +++E +DI 
Sbjct: 318 DATTVLSRKIVEQGIYPAVDPLASNSRILEPDIVGQAHYDTAQTVLKYL-QKYKELQDII 376

Query: 391 LIGG 394
            I G
Sbjct: 377 AILG 380


>gi|313903636|ref|ZP_07837026.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466189|gb|EFR61713.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 469

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PIDG +   +      I    P   +     +  +TGI+VID+  P   G
Sbjct: 92  LGRMFNVLGEPIDGKEP-PQAKKRYPIHRPAPDVADVNPATEILETGIKVIDLICPFARG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  +      + + VGER RE  +   +      L K+
Sbjct: 151 GKVGLFGGAGVGKTVIIMELIHNIAYKHGGFSVFAGVGERTREGNDLYHELKESGVLDKT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT + +AEYF   +G ++LL +D+I RF  +  E++   G +
Sbjct: 211 ALVFGQMNEPPGARLRVGLTGLAMAEYFRDEEGQDLLLFIDNIFRFTQAGSEVSALLGRM 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D++ DP   +  + LD  +
Sbjct: 271 PSAVGYQPTLATEMGNLQERI--TTTRKGSITSVQAVYVPADDYTDPAPVTTFAHLDSTV 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L R++AE G YP VDPLAS SR+ D      E  ++   +  ++ R+++ +DI  I G
Sbjct: 329 RLERAIAERGIYPAVDPLASTSRILDPNIVGQEHYEVARGVQQVLQRYKDLQDIIAILG 387


>gi|291549096|emb|CBL25358.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus torques
           L2-14]
          Length = 464

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 172/325 (52%), Gaps = 14/325 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID  + +   D    ++ + PP    Q  V +  +TGI+VID+  P   G
Sbjct: 86  GRLFNVLGETIDNGEPIT--DSKKWVIHRQPPTFEDQSPVVEILETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + + E      L+K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFTQAGSEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R + E+G YP VDPL S SR+ +     +E  ++ + +  ++ +++E +DI  I G 
Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVANKVIAILQKYKELQDIIAILGM 381

Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419
               D   DKA V +   I  FL Q
Sbjct: 382 EELSD--EDKATVMRARKIQKFLSQ 404


>gi|289423325|ref|ZP_06425133.1| ATP synthase F1, beta subunit [Peptostreptococcus anaerobius 653-L]
 gi|289156256|gb|EFD04913.1| ATP synthase F1, beta subunit [Peptostreptococcus anaerobius 653-L]
          Length = 465

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 159/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  D+    D+ +  + K  P  +    +    +TGI+V+D+  P   
Sbjct: 87  LGRVFNVLGEAIDQKDA--PTDVEVSPIHKPAPKYDELETKAEILETGIKVVDLLAPYLK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      +KK
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMTESGVIKK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++   G 
Sbjct: 205 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDQAGQDVLLFIDNIFRFTQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD  
Sbjct: 265 MPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R ++  G YP VDPL S SR+ D      E  ++   +  ++ R++E +DI  I G
Sbjct: 323 TVLSRQISSLGIYPAVDPLESTSRVLDPNIVGQEHYEVARGVQSILQRYKELQDIIAILG 382


>gi|329767908|ref|ZP_08259421.1| ATP synthase subunit beta [Gemella haemolysans M341]
 gi|328838614|gb|EGF88215.1| ATP synthase subunit beta [Gemella haemolysans M341]
          Length = 471

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ +D  +  G       I  + P         +  +TGI+VID+  P   G
Sbjct: 90  LGRVFNVLGEAVDHGEEAGAEVRKDSIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      + K+
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINKT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 270 PSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L RSL E G YP VDPLAS SR LA +    +  ++ + +   + ++ E +DI  I G
Sbjct: 328 NLERSLTEMGIYPAVDPLASTSRALAPEIVGEEHYQVATRIQRTLQKYRELQDIIAILG 386


>gi|329768922|ref|ZP_08260349.1| ATP synthase subunit beta [Gemella sanguinis M325]
 gi|328836639|gb|EGF86297.1| ATP synthase subunit beta [Gemella sanguinis M325]
          Length = 471

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ +D  +  G  ++  E + K  P         +  +TGI+VID+  P   
Sbjct: 90  LGRVFNVLGEAVDHGEEPG-AEVQKESIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIK 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      + K
Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINK 208

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 209 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 268

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 269 MPSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 326

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R+L E G YP VDPLAS SR LA +    +  ++ + +   + ++ E +DI  I G
Sbjct: 327 TNLERALTEMGIYPAVDPLASTSRALAPEIVGEEHYQVATRIQRTLQKYRELQDIIAILG 386


>gi|54298270|ref|YP_124639.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Paris]
 gi|53752055|emb|CAH13481.1| hypothetical protein lpp2328 [Legionella pneumophila str. Paris]
          Length = 474

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 12/314 (3%)

Query: 84  GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V+  G     P +  C GR++N  G+P+DG   L   +   ++++K  P       E
Sbjct: 85  GLIVYDQGTSLQIPVSKECLGRLLNIFGEPLDGGPPLETNEYR-DVLAKSEPLQMTSTQE 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199
              +TGI+VID+  P   G + G+F G+G+GK+ LL   M A         + + VGER 
Sbjct: 144 TILETGIKVIDLLCPFVRGSKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 203

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257
           RE  E   +      + K+++V    DESP +R    L+A+T AEY   + G  VL ++D
Sbjct: 204 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 263

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  EI+   G +P + GY  ++ +E+  L ER+  +   KG +T+V +V V  
Sbjct: 264 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 321

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ +DP    + + LD  IVL+R+ A +G YP VDPLAS S+  DK    +    ++   
Sbjct: 322 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 381

Query: 378 --HLIHRFEETRDI 389
             HL H ++E  D+
Sbjct: 382 REHLEH-YQELEDM 394


>gi|261409677|ref|YP_003245918.1| ATP synthase F1 subunit beta [Paenibacillus sp. Y412MC10]
 gi|329923666|ref|ZP_08279091.1| ATP synthase F1, beta subunit [Paenibacillus sp. HGF5]
 gi|261286140|gb|ACX68111.1| ATP synthase F1, beta subunit [Paenibacillus sp. Y412MC10]
 gi|328941143|gb|EGG37443.1| ATP synthase F1, beta subunit [Paenibacillus sp. HGF5]
          Length = 466

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 163/303 (53%), Gaps = 11/303 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           +   GRV N LG+PID   ++   +++  I  + P         +  +TGI+VID+  P 
Sbjct: 87  SATLGRVFNVLGEPIDNAGAV-VSEVNNPIHREAPAYDELSTQAEMLETGIKVIDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-- 213
             G +IG+F G+G+GK+  +     +   +   IS+   VGER RE  +   + + D+  
Sbjct: 146 QKGGKIGLFGGAGVGKTVAIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSGV 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           + K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++  
Sbjct: 205 INKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGKDVLLFIDNIFRFTQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ SE+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLASEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D    L R ++E G YP VDPLAS SR LA +    +   +   +  ++ R+ E +DI  
Sbjct: 323 DATTNLERKISEMGIYPAVDPLASSSRILAPEIVGEEHYNVAQGVKKILARYNELQDIIA 382

Query: 392 IGG 394
           I G
Sbjct: 383 ILG 385


>gi|167467518|ref|ZP_02332222.1| flagellum-specific ATP synthase [Yersinia pestis FV-1]
          Length = 194

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 105/174 (60%)

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           I+DS+TR+A   REIA   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL
Sbjct: 9   IMDSLTRYATKEREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVL 68

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DPIADS R+ILDGH+VL+R LAE G YP +D  AS+SR        D    V 
Sbjct: 69  TEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVR 128

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
               L+  ++  RD+  +G Y  G D +LDKA+   P +  FL+Q   + SS D
Sbjct: 129 QFKQLLASYQRNRDLISVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFD 182


>gi|295697747|ref|YP_003590985.1| ATP synthase F1, beta subunit [Bacillus tusciae DSM 2912]
 gi|295413349|gb|ADG07841.1| ATP synthase F1, beta subunit [Bacillus tusciae DSM 2912]
          Length = 472

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 169/329 (51%), Gaps = 16/329 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PID    +   +L+  I    P    +    + F+TGI+V+D+  P  
Sbjct: 92  ATLGRIFNVLGQPIDEQGPVAT-ELTHPIHRPAPSFEEQSTKVEIFETGIKVVDLLAPYI 150

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ L+     +         + + VGER RE  +   +      + 
Sbjct: 151 KGGKVGLFGGAGVGKTVLIQELIHNIAKQHGGFSVFAGVGERTREGNDLYHEMRESGVID 210

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+V+V    +E P  R    LT +T AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 211 KTVMVFGQMNEPPGARMRVGLTGLTFAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLG 270

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ V  D++ DP   +  + LD 
Sbjct: 271 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATTFAHLDA 328

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R ++E G YP VDPLAS SR L+      +   +   +  ++ R+ E +DI  I 
Sbjct: 329 TTNLERKISELGIYPAVDPLASTSRALSPDVVGQEHYDVARGVQQVLQRYRELQDIIAI- 387

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419
               G+D + D+    V +   I +FL Q
Sbjct: 388 ---LGMDELTDEDKLTVARARKIQNFLSQ 413


>gi|312371563|gb|EFR19714.1| hypothetical protein AND_21925 [Anopheles darlingi]
 gi|312371564|gb|EFR19715.1| hypothetical protein AND_21926 [Anopheles darlingi]
          Length = 503

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 166/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    + + +LS  I ++ P  +     ++   TGI+V+
Sbjct: 107 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIEMSVEQEILVTGIKVV 165

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 166 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 224

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 225 MIEGGVISLKDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 284

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 285 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 342

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 343 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 402

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 403 LQDYKSLQDIIAILG 417


>gi|299753037|ref|XP_001833020.2| ATP synthase subunit beta [Coprinopsis cinerea okayama7#130]
 gi|298410114|gb|EAU88709.2| ATP synthase subunit beta [Coprinopsis cinerea okayama7#130]
          Length = 483

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 166/306 (54%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + KG+  + I +  P  +++    +  +TGI+V+D+  P   G
Sbjct: 96  LGRIINVIGEPIDERGPI-KGEKMLPIHADPPAFVDQSTTAEVLETGIKVVDLLAPYARG 154

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---- 210
            +IG+F G+G+GK+ L+     +        S+   VGER RE      E IE  +    
Sbjct: 155 GKIGLFGGAGVGKTVLIQELINNVAKAHGGFSIFCGVGERTREGNDLYHEMIETGVIQLE 214

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 215 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  
Sbjct: 273 SALLGRIPSAVGYQPTLSTDMGAMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTF 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE G YP VDPL S SR+ D      E  ++ +++  ++  ++  +D
Sbjct: 331 AHLDATTVLSRSIAELGIYPAVDPLDSKSRMLDPRIVGQEHYEVATAVQKILQDYKSLQD 390

Query: 389 IRLIGG 394
           I  I G
Sbjct: 391 IIAILG 396


>gi|21672302|ref|NP_660369.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|4033705|sp|Q07232|ATPB_BUCAP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2827018|gb|AAC38110.1| ATP synthase subunit beta [Buchnera aphidicola]
 gi|21622900|gb|AAM67580.1| ATP synthase beta chain [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 466

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 165/336 (49%), Gaps = 12/336 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS-- 125
           IV    +G    +  G +V   G + ++       GR+IN LGK ID    L   D S  
Sbjct: 52  IVRTIAMGSTNGLKRGLIVIDLGHYIKVPVGQATLGRIINVLGKTIDNKGPLKNLDNSKL 111

Query: 126 --MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              EI    P    +   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 112 EYWEIHRSAPSYQEQASSQEILETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIR 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +      L K  +V    +E P  R     T +
Sbjct: 172 NIAIEHSGYSVFTGVGERTREGNDFYHEMKDSKVLDKVSLVYGQMNEPPGNRLRVAFTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 232 TIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT+V +V V  D+  DP   +  + LD  + L+R +A  G YP +DPL S SR
Sbjct: 290 TSTKEGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIAALGIYPAIDPLNSTSR 349

Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             D     DE       +  ++ R++E +DI  I G
Sbjct: 350 QLDPYIVGDEHYDTARGVQSILQRYQELKDIIAILG 385


>gi|291537138|emb|CBL10250.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           M50/1]
          Length = 465

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 9/316 (2%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D V   G   +       GR+ N LG PID  D    G     I    P    +   ++ 
Sbjct: 74  DAVATGGPISVPVGENTLGRMFNVLGDPIDEIDPPA-GVEKWPIHRPAPAFEEQATSQEM 132

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE
Sbjct: 133 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTRE 192

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSI 259
             + + E      + K+ +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I
Sbjct: 193 GNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKDVLLFIDNI 252

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+
Sbjct: 253 FRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADD 310

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
             DP   +  + LD   VL RS+AE G YP VDPL S SR+ D      E  ++   +  
Sbjct: 311 LTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHFEVARGVQE 370

Query: 379 LIHRFEETRDIRLIGG 394
           ++ +++E +DI  I G
Sbjct: 371 ILQKYKELQDIIAILG 386


>gi|240143395|ref|ZP_04741996.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|257204664|gb|EEV02949.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|291540378|emb|CBL13489.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           XB6B4]
          Length = 465

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 9/316 (2%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D V   G   +       GR+ N LG PID  D    G     I    P    +   ++ 
Sbjct: 74  DAVAAGGPISVPVGENTLGRMFNVLGDPIDEIDPPA-GVEKWPIHRPAPAFEEQATSQEM 132

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE
Sbjct: 133 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTRE 192

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSI 259
             + + E      + K+ +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I
Sbjct: 193 GNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKDVLLFIDNI 252

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+
Sbjct: 253 FRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADD 310

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
             DP   +  + LD   VL RS+AE G YP VDPL S SR+ D      E  ++   +  
Sbjct: 311 LTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHFEVARGVQE 370

Query: 379 LIHRFEETRDIRLIGG 394
           ++ +++E +DI  I G
Sbjct: 371 ILQKYKELQDIIAILG 386


>gi|222475194|ref|YP_002563610.1| ATP synthase beta chain (atpD) [Anaplasma marginale str. Florida]
 gi|222419331|gb|ACM49354.1| ATP synthase beta chain (atpD) [Anaplasma marginale str. Florida]
          Length = 488

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S GD     G   ++P      GRV + LG+PIDG  S+   D+   
Sbjct: 69  MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 127

Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182
            +    P+++ QRV  +   TGI+V+D+  P   G ++G+F G+G+GK+     L+S  A
Sbjct: 128 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 187

Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234
           R+     V    VGER RE     RE +E  +   D   KS  V+V    +E P  R   
Sbjct: 188 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 246

Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF  S+G +VL  +D++ RF  S  E++   G +P A GY  ++ +E+  +
Sbjct: 247 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 306

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +    G+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 307 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 364

Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L S S+ L+ +   ++  ++   +  ++  ++  +DI  I G
Sbjct: 365 LESTSQALSPEVVGSEHYEVAQEVKRILQTYKSLQDIIAILG 406


>gi|1168569|sp|P42006|ATPB_BACST RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|534854|dbj|BAA07255.1| ATPase subunit beta [Geobacillus stearothermophilus]
          Length = 473

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID +  +   D   + + +  P       E +  +TGI+VID+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVIDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV---GERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+    GER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGFGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+  RF  +  E++   
Sbjct: 209 SKTGMVFGQMNEPPGPRMRVALTGLTMAEYFRDEQGQDVLLFIDNNFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG+IT++ ++ V  D++ DP   +  S LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R LAE G YP VDPLAS SR LA +    +  ++   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + D+    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|112791412|gb|ABI21976.1| ATP synthase beta subunit [Erwinia mallotivora]
          Length = 420

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|416679|sp|Q03234|ATPB_LACCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|43972|emb|CAA45840.1| ATPase (beta-subunit) [Lactobacillus casei]
          Length = 470

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG PID  ++L        I    P   +     +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDPIDDGEALDLNHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++ +
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVMENT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPRTTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L R L E+G YP VDPL +S S L  +    +  K+ + +  ++ R+ E +DI
Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 380


>gi|331083911|ref|ZP_08333020.1| ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403336|gb|EGG82896.1| ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 462

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 159/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+ ID  + L   +    ++ + PPA + Q  V +  +TGI+VID+  P   
Sbjct: 85  LGRLFNVLGETIDKGEQLDNAE--HWVIHRDPPAFDEQSPVVEILETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L+K
Sbjct: 143 GGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF  K   NVLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +      E  ++   +   + +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEADVVGQEHYEVARKVQEYLQKYKELQDIIAILG 380


>gi|300214400|gb|ADJ78816.1| ATP synthase subunit beta (F-ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Lactobacillus salivarius CECT
           5713]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 155/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID      +      I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGNTIDNGPEFDEDHPRNPIHRDAPKYDQLSTGIEILETGIKVIDLLAPYIKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKESGVLEKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L RSL ++G YP VDPLAS S  L  +    +  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLTQQGIYPAVDPLASTSSALTPEIVGEEHYEVATEVQHVLQRYRELQDI 378


>gi|90961576|ref|YP_535492.1| F0F1 ATP synthase subunit beta [Lactobacillus salivarius UCC118]
 gi|227890662|ref|ZP_04008467.1| H(+)-transporting two-sector ATPase [Lactobacillus salivarius ATCC
           11741]
 gi|301299952|ref|ZP_07206179.1| ATP synthase F1, beta subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|118573690|sp|Q1WUC6|ATPB_LACS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|90820770|gb|ABD99409.1| ATP synthase beta chain [Lactobacillus salivarius UCC118]
 gi|227867600|gb|EEJ75021.1| H(+)-transporting two-sector ATPase [Lactobacillus salivarius ATCC
           11741]
 gi|300852434|gb|EFK80091.1| ATP synthase F1, beta subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 155/294 (52%), Gaps = 8/294 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID      +      I    P         +  +TGI+VID+  P   G
Sbjct: 87  LGRVFNVLGNTIDNGPEFDEDHPRNPIHRDAPKYDQLSTGIEILETGIKVIDLLAPYIKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      L+K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKESGVLEKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            L RSL ++G YP VDPLAS S  L  +    +  ++ + + H++ R+ E +DI
Sbjct: 325 NLERSLTQQGIYPAVDPLASTSSALTPEIVGEEHYEVATEVQHVLQRYRELQDI 378


>gi|302388467|ref|YP_003824289.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
 gi|302199095|gb|ADL06666.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
          Length = 464

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 163/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID    L  G     ++ + PPA   Q  V +  +TGI+VID+  P   G
Sbjct: 87  GRLFNVLGETIDHGGDLEGG--PQWVIHRDPPAFEEQSPVAEILETGIKVIDLLAPYAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   + +G++  + K
Sbjct: 145 GKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVISK 203

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G 
Sbjct: 204 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHKNVLLFIDNIFRFTQAGSEVSALLGR 263

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G++T+V +V V  D+  DP   +  + LD  
Sbjct: 264 MPSAVGYQPTLATEMGELQERI--TSTKNGSVTSVQAVYVPADDLTDPAPATTFAHLDAT 321

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPLAS SR+ +     +E  ++   +  ++ +++E +DI  I G
Sbjct: 322 TVLSRKIVEQGIYPAVDPLASNSRILEPDVVGEEHYEVARKVQEILQKYKELQDIIAILG 381


>gi|146313762|ref|YP_001178836.1| F0F1 ATP synthase subunit beta [Enterobacter sp. 638]
 gi|166990369|sp|A4WGF5|ATPB_ENT38 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145320638|gb|ABP62785.1| ATP synthase F1 subcomplex beta subunit [Enterobacter sp. 638]
          Length = 460

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ D    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGQPIDMKGDIGEED-RWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILG 379


>gi|257870214|ref|ZP_05649867.1| ATP synthase F1 [Enterococcus gallinarum EG2]
 gi|257804378|gb|EEV33200.1| ATP synthase F1 [Enterococcus gallinarum EG2]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFPEDAKRSGIHKKAPDFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +       ++ + + H + R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEKHYEVATEVQHALQRYRELQDIIAILG 385


>gi|11908130|gb|AAG23340.1| ATPase beta subunit [Trypanosoma brucei brucei]
          Length = 518

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+  L M I +  P   ++   +    TGI+VID+  P C G 
Sbjct: 119 GRIFNVLGDAIDQRGPVGE-KLRMPIHAVAPKLADQAAEDAVLTTGIKVIDLILPYCKGG 177

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 178 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 236

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 237 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEVSA 296

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L +L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 297 LLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 354

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R++AE G YP V+PL   SR+ D    S D   +   +  ++ ++ E +DI
Sbjct: 355 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYRELQDI 413


>gi|163761385|ref|ZP_02168459.1| ATP synthase subunit B [Hoeflea phototrophica DFL-43]
 gi|162281380|gb|EDQ31677.1| ATP synthase subunit B [Hoeflea phototrophica DFL-43]
          Length = 517

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 163/306 (53%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D D    K   + EI    P  + +    +   TGI+V+D+  P   G
Sbjct: 130 LGRIMNVIGEPVD-DAGPIKTKATREIHQDAPSYVEQSTEAEILVTGIKVVDLLAPYAKG 188

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  AR+     V    VGER RE      E IE     +
Sbjct: 189 GKIGLFGGAGVGKTVLIMELINNVARAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 247

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G +  K+ +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 248 GGGDGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 307

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 308 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAPATSF 365

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R+++E+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 366 AHLDATTVLSRAISEKGIYPAVDPLDSTSRMLDPQIVGEEHYEVARKVQSTLQRYKSLQD 425

Query: 389 IRLIGG 394
           I  I G
Sbjct: 426 IIAILG 431


>gi|107024491|ref|YP_622818.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia AU 1054]
 gi|116688130|ref|YP_833753.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia HI2424]
 gi|170731477|ref|YP_001763424.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia MC0-3]
 gi|171315826|ref|ZP_02905057.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5]
 gi|254246698|ref|ZP_04940019.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184]
 gi|118573513|sp|Q1BRB0|ATPB_BURCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201694|sp|A0K2Y3|ATPB_BURCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739983|sp|B1JSV7|ATPB_BURCC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|105894680|gb|ABF77845.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia
           AU 1054]
 gi|116646219|gb|ABK06860.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia
           HI2424]
 gi|124871474|gb|EAY63190.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184]
 gi|169814719|gb|ACA89302.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia MC0-3]
 gi|171099015|gb|EDT43800.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5]
          Length = 464

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + D++  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESDVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|296111398|ref|YP_003621780.1| ATP synthase subunit B [Leuconostoc kimchii IMSNU 11154]
 gi|295832930|gb|ADG40811.1| ATP synthase subunit B [Leuconostoc kimchii IMSNU 11154]
          Length = 466

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 155/296 (52%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+D + ++        I  + P         +  +TGI+VID+  P  
Sbjct: 85  STLGRVFNVLGEPVDNNGAIADDTPRNSIHREAPKYDELASSTEILETGIKVIDLLAPYV 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      LK
Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMEESGVLK 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AE F  ++G +VLL +D+I RF  +  E++   G
Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
              L R+L ++G YP VDPLAS S   D      E  ++ + +   + R+ E +DI
Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDI 378


>gi|112791408|gb|ABI21974.1| ATP synthase beta subunit [Erwinia tracheiphila]
          Length = 421

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|319947322|ref|ZP_08021555.1| ATP synthase F1 sector beta subunit [Streptococcus australis ATCC
           700641]
 gi|319746564|gb|EFV98824.1| ATP synthase F1 sector beta subunit [Streptococcus australis ATCC
           700641]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +++  +      I  K P        E+  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEEAFPEDAPRESIHKKAPSFDELSTSEEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V+S +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPDIVGEEHYAVASEVKRVLQRYHELQDIIAILG 385


>gi|298251439|ref|ZP_06975242.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963]
 gi|297546031|gb|EFH79899.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963]
          Length = 484

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID  +++     ++ I    P   ++ +  +  +TGI+VID+  P   G 
Sbjct: 106 GRIFNVLGEPIDNKEAVVDAP-TLPIHRPAPTLEDQTKDSEILETGIKVIDLICPFMKGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G F G+G GK+ ++     +   +     + + VGER RE  +   + +    + +  
Sbjct: 165 KVGAFGGAGTGKTLIIQELINNIAINHGGYSVFAGVGERTREGNDLYHEMIERGVIDRVA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 225 MIFGQMNEPPGARLRVALTGLTMAEYFRDQEGKDVLLFIDNIFRFTQAGAEVSALLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD  +V
Sbjct: 285 SAVGYQPNLAEEMGELQERI--TSTKKGSITSLQAVFVPADDYTDPAPATTFAHLDSTVV 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++AE+  +P VDPLAS SR+ D     +E       +   + R+ E  DI  I G
Sbjct: 343 LDRAIAEQALFPAVDPLASASRILDPQIVGEEHYNTARGVQRTLQRYNELEDIITILG 400


>gi|237736350|ref|ZP_04566831.1| ATP synthase subunit beta [Fusobacterium mortiferum ATCC 9817]
 gi|229421392|gb|EEO36439.1| ATP synthase subunit beta [Fusobacterium mortiferum ATCC 9817]
          Length = 466

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 163/311 (52%), Gaps = 17/311 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++       GR++N LG+P+D D+   + D  + I    P    ++   + F+TGI+VID
Sbjct: 77  KVPVGKAVLGRILNVLGQPVD-DNGPVETDEYLPIHRDAPSFEEQETETEIFETGIKVID 135

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210
           +  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+  ++  
Sbjct: 136 LLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLYDEMT 195

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
               L K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E
Sbjct: 196 ESGVLSKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSE 255

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   + 
Sbjct: 256 VSALLGRMPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATT 313

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-----EKKLVSSLTHLIHRF 383
            S LD   VL+R +A  G YP VDPL S S    KA SAD        +   +  ++ R+
Sbjct: 314 FSHLDATTVLSRQIASLGIYPAVDPLDSTS----KALSADIVGTEHYNVAREVQEVLQRY 369

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 370 KELQDIIAILG 380


>gi|229064956|ref|ZP_04200254.1| ATP synthase subunit beta [Bacillus cereus AH603]
 gi|228716257|gb|EEL67969.1| ATP synthase subunit beta [Bacillus cereus AH603]
          Length = 469

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 177/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +   +   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYGVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|72386615|ref|XP_843732.1| ATP synthase beta chain, mitochondrial precursor [Trypanosoma
           brucei]
 gi|62175406|gb|AAX69548.1| ATP synthase beta chain, mitochondrial precursor [Trypanosoma
           brucei]
 gi|70800264|gb|AAZ10173.1| ATP synthase beta chain, mitochondrial precursor [Trypanosoma
           brucei brucei strain 927/4 GUTat10.1]
 gi|261326801|emb|CBH09774.1| ATP synthase F1, beta subunit [Trypanosoma brucei gambiense DAL972]
          Length = 519

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+  L M I +  P   ++   +    TGI+VID+  P C G 
Sbjct: 119 GRIFNVLGDAIDQRGPVGE-KLRMPIHAVAPKLADQAAEDAVLTTGIKVIDLILPYCKGG 177

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 178 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 236

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 237 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEVSA 296

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L +L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 297 LLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 354

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R++AE G YP V+PL   SR+ D    S D   +   +  ++ ++ E +DI
Sbjct: 355 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYRELQDI 413


>gi|114322016|ref|YP_743699.1| F0F1 ATP synthase subunit beta [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310606|sp|Q0A4M8|ATPB_ALHEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114228410|gb|ABI58209.1| ATP synthase F1 subcomplex beta subunit [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 458

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+++ LG+P+D      KG +  E    I    P    +    +  +TGI+VID+  P
Sbjct: 83  LGRIMDVLGEPVDE-----KGAVETEERWGIHRSAPSFAEQAGGAELLETGIKVIDLLCP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N 
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIATEHAGYSVFAGVGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AEYF  +G ++L+ +D+I R+  +  E++   
Sbjct: 198 LDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILMFIDNIYRYTLAGTEVSALL 257

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 258 GRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
             +VL R +AE G YP VDPL S SR  D     +E   V+  +  ++ R++E RDI  I
Sbjct: 316 ATVVLARGIAELGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGVLQRYKELRDIIAI 375

Query: 393 GG 394
            G
Sbjct: 376 LG 377


>gi|226196940|ref|ZP_03792518.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
           9]
 gi|225930923|gb|EEH26932.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
           9]
          Length = 469

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G  R+       GR+++  G P  GDD      D+    + +  P +  Q+     F TG
Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 165

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203
           I+VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  
Sbjct: 166 IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 223

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           E + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ R
Sbjct: 224 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 283

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  
Sbjct: 284 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 341

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I
Sbjct: 342 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 401

Query: 381 HRFEETRDI 389
             + E +D+
Sbjct: 402 EHYRELQDV 410


>gi|218283211|ref|ZP_03489281.1| hypothetical protein EUBIFOR_01869 [Eubacterium biforme DSM 3989]
 gi|218216029|gb|EEC89567.1| hypothetical protein EUBIFOR_01869 [Eubacterium biforme DSM 3989]
          Length = 461

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG  IDG +++   D    I  K P   ++  V +  +TGI+VID+  P   G
Sbjct: 85  LGRLFNVLGDTIDGKEAIDT-DTYWPIHRKPPKFEDQSPVTEVLETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+    R   S+     I + VGER RE  + + E      +K +
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIASEHGGYSIFTGVGERSREGNDLYTEMSESGVIKNT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +ESP  R     T +T+AEYF   +  +VLL +D+I RF  +  E+++  G +
Sbjct: 204 ALVFGQMNESPGARMRVAETGLTMAEYFRDVEHKDVLLFIDNIFRFVQAGSEVSSLLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  S  + G++T+V +V V  D+  DP   +    LD   
Sbjct: 264 PSAVGYQPTLANEMGQLQERI--SSTKNGSVTSVQAVYVPADDLTDPAPATTFEHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+       +E  +    +   + +++E +DI  I G
Sbjct: 322 VLSRKVVEQGIYPAVDPLESSSRILQPDIVGEEHYETAQRVLQYLQKYKELQDIIAILG 380


>gi|149911798|ref|ZP_01900402.1| ATP synthase subunit B [Moritella sp. PE36]
 gi|149805144|gb|EDM65166.1| ATP synthase subunit B [Moritella sp. PE36]
          Length = 461

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 11/302 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           AC  GR++N LG PIDG  ++   D+  EI    P    +    +  +TG++VID+  P 
Sbjct: 84  ACL-GRIVNVLGNPIDGKGAI-PTDVRYEIHRAAPSYEEQSLSNELLETGVKVIDLICPF 141

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDN 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  E      
Sbjct: 142 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMEEAGV 200

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +++AE F  +G +VLL +D+I R+  +  E++   
Sbjct: 201 LDKVAMVYGQMNEPPGNRLRVALTGLSMAERFRDEGKDVLLFIDNIYRYTLAGTEVSALL 260

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD
Sbjct: 261 GRMPSAVGYQPTLAEEMGILQERI--TSTKSGSITSIQAVYVPADDLTDPSPATTFAHLD 318

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VLNR++A  G YP +DPL S SR  D      E   +   +  ++ R+ E +DI  I
Sbjct: 319 ATVVLNRNIASMGMYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQGVLQRYTELKDIIAI 378

Query: 393 GG 394
            G
Sbjct: 379 LG 380


>gi|56416829|ref|YP_153903.1| F0F1 ATP synthase subunit beta [Anaplasma marginale str. St.
           Maries]
 gi|81599150|sp|Q5PAN2|ATPB_ANAMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56388061|gb|AAV86648.1| ATP synthase beta chain [Anaplasma marginale str. St. Maries]
          Length = 486

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 20/342 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S GD     G   ++P      GRV + LG+PIDG  S+   D+   
Sbjct: 67  MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 125

Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182
            +    P+++ QRV  +   TGI+V+D+  P   G ++G+F G+G+GK+     L+S  A
Sbjct: 126 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 185

Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234
           R+     V    VGER RE     RE +E  +   D   KS  V+V    +E P  R   
Sbjct: 186 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 244

Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF  S+G +VL  +D++ RF  S  E++   G +P A GY  ++ +E+  +
Sbjct: 245 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 304

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +    G+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 305 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 362

Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L S S+ L+ +   ++  ++   +  ++  ++  +DI  I G
Sbjct: 363 LESTSQALSPEVVGSEHYEVAQEVKRILQTYKSLQDIIAILG 404


>gi|46909257|gb|AAT06146.1| ATP synthase beta subunit [Mytilus californianus]
          Length = 348

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G PID    +   D  + I ++ P  +     ++  +TGI+V+
Sbjct: 14  IRIPVGPATLGRIINVVGDPIDERGPVNT-DKFLSIHAEAPDFVEMSVTQEVLETGIKVV 72

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +
Sbjct: 73  DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 131

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
                   L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 132 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIF 191

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++ + G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+ 
Sbjct: 192 RFTQAGSEVSASLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVYVPADDL 249

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++  +
Sbjct: 250 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRILDPHVVGEEHYTVARNVQKI 309

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 310 LQNYKSLQDIIAILG 324


>gi|293365289|ref|ZP_06612006.1| ATP synthase F1 sector beta subunit [Streptococcus oralis ATCC
           35037]
 gi|307703829|ref|ZP_07640770.1| ATP synthase F1, beta subunit [Streptococcus oralis ATCC 35037]
 gi|315613058|ref|ZP_07887969.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis ATCC
           49296]
 gi|322374416|ref|ZP_08048930.1| ATP synthase F1, beta subunit [Streptococcus sp. C300]
 gi|331266489|ref|YP_004326119.1| proton-translocating ATPase, F1 sector,beta-subunit [Streptococcus
           oralis Uo5]
 gi|291316739|gb|EFE57175.1| ATP synthase F1 sector beta subunit [Streptococcus oralis ATCC
           35037]
 gi|307622664|gb|EFO01660.1| ATP synthase F1, beta subunit [Streptococcus oralis ATCC 35037]
 gi|315315168|gb|EFU63209.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis ATCC
           49296]
 gi|321279916|gb|EFX56955.1| ATP synthase F1, beta subunit [Streptococcus sp. C300]
 gi|326683161|emb|CBZ00779.1| proton-translocating ATPase, F1 sector,beta-subunit [Streptococcus
           oralis Uo5]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|86605139|ref|YP_473902.1| F0F1 ATP synthase subunit beta [Synechococcus sp. JA-3-3Ab]
 gi|118573767|sp|Q2JX57|ATPB_SYNJA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86553681|gb|ABC98639.1| ATP synthase F1, beta subunit [Synechococcus sp. JA-3-3Ab]
          Length = 477

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D  + +   + +  I    PP +      + F+TGI+VID+  P  
Sbjct: 96  ATLGRIFNVLGEPVDQGEPVQAKEFA-PIHRSAPPFVELTVKPEPFETGIKVIDLLAPFK 154

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      L 
Sbjct: 155 RGGKVGLFGGAGVGKTVLIQELIHNIAEEHSGLSVFAGVGERTREGNDLYNEMKESGVLD 214

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 215 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLG 274

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 275 RMPSAVGYQPTLATEMGNLQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDS 332

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+RSLA +G YP VDPL S S +       +E      ++   + R++E +DI  I 
Sbjct: 333 TVVLSRSLAAKGIYPAVDPLDSSSTILQADIVGEEHYNTAQAVKQTLQRYKELQDIIAIL 392

Query: 394 G 394
           G
Sbjct: 393 G 393


>gi|254491137|ref|ZP_05104318.1| ATP synthase F1, beta subunit [Methylophaga thiooxidans DMS010]
 gi|224463650|gb|EEF79918.1| ATP synthase F1, beta subunit [Methylophaga thiooxydans DMS010]
          Length = 458

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+++ LGKPID      KGD+  E    I  K P         +  +TGI+VID+  P
Sbjct: 83  LGRIMDVLGKPIDE-----KGDIGEEERWGIHRKAPKFDELAASNELLETGIKVIDLVCP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N 
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I R+  +  E++   
Sbjct: 198 IDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALL 257

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD
Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
             +VL+RS+AE G YP +DPL S SR  D      D   +   + + + R++E +DI  I
Sbjct: 316 ATVVLSRSIAELGIYPAIDPLDSTSRQLDPLVVGNDHYNIARGVQNTLQRYKELKDIIAI 375

Query: 393 GG 394
            G
Sbjct: 376 LG 377


>gi|313890576|ref|ZP_07824204.1| ATP synthase F1, beta subunit [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121093|gb|EFR44204.1| ATP synthase F1, beta subunit [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG  ID +    + D   E + K  PA +         +TGI+VID+  P   
Sbjct: 89  LGRVFNVLGDTIDLEKPFAE-DAEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALAPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|270292835|ref|ZP_06199046.1| ATP synthase F1, beta subunit [Streptococcus sp. M143]
 gi|270278814|gb|EFA24660.1| ATP synthase F1, beta subunit [Streptococcus sp. M143]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|229014475|ref|ZP_04171593.1| ATP synthase subunit beta [Bacillus mycoides DSM 2048]
 gi|229170013|ref|ZP_04297705.1| ATP synthase subunit beta [Bacillus cereus AH621]
 gi|228613438|gb|EEK70571.1| ATP synthase subunit beta [Bacillus cereus AH621]
 gi|228746825|gb|EEL96710.1| ATP synthase subunit beta [Bacillus mycoides DSM 2048]
          Length = 469

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 177/333 (53%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D  +   D+  + + +  PA      +VE   +TGI+V+D+  P
Sbjct: 88  VTLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R+   LT +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L + G YP VDPLAS SR L+ +    +   +   +   + R++E +DI 
Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYGVARQVQQTLQRYKELQDII 382

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     G+D + ++    VH+   I  FL Q+
Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411


>gi|150011015|gb|ABR57164.1| F0F1-type ATP synthase beta subunit [Staphylococcus xylosus]
          Length = 470

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 166/306 (54%), Gaps = 18/306 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNR--QRVEKGFKTGIRVIDIF 155
              GRV N LG  ID D+ L   D S+E   + +  PA ++   +VE   +TGI+VID+ 
Sbjct: 87  ATLGRVFNVLGDTIDLDEKL---DSSVERDPIHRESPAFDQLSTKVEI-LETGIKVIDLL 142

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D
Sbjct: 143 APYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSD 201

Query: 213 N--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           +  +KK+ +V    +E P  R    L+ +T+AE+F   +G +VLL +D+I RF  +  E+
Sbjct: 202 SGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEHFRDVQGQDVLLFIDNIFRFTQAGSEV 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +V 
Sbjct: 262 SALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPAAVF 319

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388
           + LD    L R L E G YP VDPLAS SR  D      D  ++   +   + ++ E +D
Sbjct: 320 AHLDATTNLERKLTEMGIYPAVDPLASTSRALDPTIVGQDHYEIARDVQSTLQKYRELQD 379

Query: 389 IRLIGG 394
           I  I G
Sbjct: 380 IIAILG 385


>gi|306825329|ref|ZP_07458670.1| ATP synthase F1 sector beta subunit [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|306829408|ref|ZP_07462598.1| ATP synthase F1 sector beta subunit [Streptococcus mitis ATCC 6249]
 gi|304428494|gb|EFM31584.1| ATP synthase F1 sector beta subunit [Streptococcus mitis ATCC 6249]
 gi|304432461|gb|EFM35436.1| ATP synthase F1 sector beta subunit [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 468

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|56965609|ref|YP_177343.1| F0F1 ATP synthase subunit beta [Bacillus clausii KSM-K16]
 gi|81821961|sp|Q5WB78|ATPB_BACSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56911855|dbj|BAD66382.1| F0F1-type ATP synthase beta chain [Bacillus clausii KSM-K16]
          Length = 470

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID  + + +G     I  + P         +  +TGI+V+D+  P  
Sbjct: 90  ATLGRVFNVLGEEIDLQEPVAEGTRRDPIHREAPSFEELTTTTEILETGIKVVDLLAPYT 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      + 
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNVALEHGGISVFAGVGERTREGNDLYHEMKDAGVIT 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR L+ +    +   +   +   + ++ E +DI  I 
Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPEIVGEEHYNVARGVQQTLQKYRELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|164688908|ref|ZP_02212936.1| hypothetical protein CLOBAR_02556 [Clostridium bartlettii DSM
           16795]
 gi|164602112|gb|EDQ95577.1| hypothetical protein CLOBAR_02556 [Clostridium bartlettii DSM
           16795]
          Length = 463

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+P+DG ++    D   + + +  P  N      +  +TGI+V+D+  P   
Sbjct: 87  LGRIFNVLGEPVDGFEA--PKDAPRDPIHRPAPEFNEIAGSAEILETGIKVVDLLAPYLK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      L K
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNVAKQHGGISVFSGVGERTREGNDLYFEMKESGVLNK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF  K   +VLL +D+I RF  +  E++   G 
Sbjct: 205 TALVFGQMNEPPGARMRVALSGLTMAEYFRDKENQDVLLFIDNIFRFTQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 265 MPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFTHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            VL+RS+A  G YP VDPL S SR+ D     +E   V+  +  ++ R++E +DI  I G
Sbjct: 323 TVLSRSIASLGIYPAVDPLESTSRVLDPNIVGEEHYAVARGVQSILQRYKELQDIIAILG 382


>gi|73662090|ref|YP_300871.1| F0F1 ATP synthase subunit beta [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|118573759|sp|Q49Z50|ATPB_STAS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|72494605|dbj|BAE17926.1| F0F1-type ATP synthase beta subunit [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 470

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 164/304 (53%), Gaps = 14/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG  ID D+ L    +  + + +  PA ++   +VE   +TGI+VID+  P
Sbjct: 87  ATLGRVFNVLGDTIDLDEKLDTS-VKRDPIHREAPAFDQLSTKVEI-LETGIKVIDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R    L+ +T+AE+F   +G +VLL +D+I RF  +  E++ 
Sbjct: 204 VIKKTAMVFGQMNEPPGARMRVALSGLTMAEHFRDVQGQDVLLFIDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +V + 
Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPAAVFAH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L E G YP VDPLAS SR  D      D  ++   +   + ++ E +DI 
Sbjct: 322 LDATTNLERKLTEMGIYPAVDPLASTSRALDPTIVGQDHYEIARDVQSTLQKYRELQDII 381

Query: 391 LIGG 394
            I G
Sbjct: 382 AILG 385


>gi|189345587|ref|YP_001942116.1| F0F1 ATP synthase subunit beta [Chlorobium limicola DSM 245]
 gi|226740177|sp|B3EDQ7|ATPB_CHLL2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189339734|gb|ACD89137.1| ATP synthase F1, beta subunit [Chlorobium limicola DSM 245]
          Length = 462

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 164/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PIDG  ++     +  I    P   +     + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGEPIDGKGAVNTKK-TYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
            + G+F G+G+GK+ L+     ++  +   F   + + VGER RE  +   + +    ++
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGFS--VFAGVGERTREGNDLYHEMMESGVIE 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R+   LT ++IAEYF  + + +VLL +D+I RF  +  E++   G
Sbjct: 203 KTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L +RI  +  + G++T+V ++ V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ D     D+      ++  ++ R+++ +DI  I 
Sbjct: 321 TTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|324997444|ref|ZP_08118556.1| F0F1 ATP synthase subunit beta [Pseudonocardia sp. P1]
          Length = 459

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D       GDL   I  K P     +   +  +TGI+V+D+ TP   G 
Sbjct: 82  GHVFNALGDCLDDPSIQFTGDLR-SIHQKAPRFDQLEGKTEMLETGIKVLDLMTPYVVGG 140

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    +    +     + + VGER RE  + I +      +K + 
Sbjct: 141 KIGLFGGAGVGKTVLIQEMIQRVALNFGGTSVFAGVGERTREGNDLITEMTESGVMKNTA 200

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF    D +VLL +D+I RF  + +E++T  G +P
Sbjct: 201 LVFGQMDEPPGTRMRVALSALTMAEYFRDAQDQDVLLFIDNIFRFTQAGQEVSTLLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 261 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++++G YP VDPL S SR+ D  +  DE  ++ + +  ++ ++ + +DI  I G
Sbjct: 319 LSRPISQKGIYPAVDPLTSTSRILDPQYVGDEHFRVANEVKRILQKYNDLQDIIAILG 376


>gi|297618429|ref|YP_003703588.1| ATP synthase F1 subunit beta [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146266|gb|ADI03023.1| ATP synthase F1, beta subunit [Syntrophothermus lipocalidus DSM
           12680]
          Length = 476

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 163/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N +G P+D    LG  D +   EI  K P  +++    +  +TG++V+D+  P   
Sbjct: 99  GRILNVVGNPVD---ELGPVDATEYWEIHRKPPALVDQVPSREMLETGVKVLDLICPYAK 155

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ ++    R+  ++     + + VGER RE  +   +      ++K
Sbjct: 156 GGKVGMFGGAGVGKTVIIMELIRNIAYEHGGYSVFTGVGERSREGNDLWNEMKESGVIEK 215

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
             ++    +E P  R    LT +T+AEYF   +G +VL+ +D+I RFA +  E++   G 
Sbjct: 216 CALIYGQMNEPPGARLRVGLTGLTVAEYFRDVEGQDVLIFIDNIFRFAQAGNEVSALLGR 275

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  L ERI  +  +KG+IT+  +V V  D+  DP   +  + LD  
Sbjct: 276 MPSAVGYQPTLATDMGLLQERI--TSTKKGSITSAQAVYVPADDLTDPAPATTFAHLDAT 333

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +AE G YP VDPL S SR+ D      E  +    +  ++ R++E +DI  I G
Sbjct: 334 TVLSRQIAELGIYPAVDPLDSTSRILDPLVLGKEHYECARGVQKVLQRYKELQDIIAILG 393


>gi|259416515|ref|ZP_05740435.1| ATP synthase F1, beta subunit [Silicibacter sp. TrichCH4B]
 gi|259347954|gb|EEW59731.1| ATP synthase F1, beta subunit [Silicibacter sp. TrichCH4B]
          Length = 474

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 166/312 (53%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR++N +G+P+D G+  + K       + +  P  N Q  E    +TGI+VID+  P
Sbjct: 84  ATLGRILNVVGEPVDEGEPIVAK---ETRAIHQPAPEFNEQSTESEVLETGIKVIDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED 208
              G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE 
Sbjct: 141 YAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIES 198

Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263
            +   DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF 
Sbjct: 199 NVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFT 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VLNR+++E G YP VDPL S SRL D     +E  K+ S +  ++ R
Sbjct: 317 APATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYKVASDVQQILQR 376

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 377 YKSLQDIIAILG 388


>gi|263359637|gb|ACY70473.1| hypothetical protein DVIR88_6g0010 [Drosophila virilis]
          Length = 526

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR++N +G+PID    +     S  I ++ P  ++    ++   TGI+V+
Sbjct: 130 IRIPVGAETLGRIMNVIGEPIDERGPIPSAKTS-PIHAEAPEFVDMSVEQEILVTGIKVV 188

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P C G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 189 DLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 247

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 248 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIF 307

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 308 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 365

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 366 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 425

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 426 LQDYKSLQDIIAILG 440


>gi|167768338|ref|ZP_02440391.1| hypothetical protein CLOSS21_02894 [Clostridium sp. SS2/1]
 gi|317497734|ref|ZP_07956048.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709862|gb|EDS20441.1| hypothetical protein CLOSS21_02894 [Clostridium sp. SS2/1]
 gi|291560311|emb|CBL39111.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing
           bacterium SSC/2]
 gi|316894984|gb|EFV17152.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 467

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG PID +    +G   + I  K P    +    +  +TGI+V+D+  P  
Sbjct: 87  ATLGRIFNVLGDPID-NKPAPEGANRLPIHRKAPEFSEQSTETEVLETGIKVVDLLCPYQ 145

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  + + E      + 
Sbjct: 146 KGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYTEMSESGVID 205

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAE F  +G  +VLL +D+I RF  +  E++   G
Sbjct: 206 KTAMVFGQMNEPPGARMRVGLTGLTIAEDFRDRGGKDVLLFIDNIFRFTQAGSEVSALLG 265

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 266 RVPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 323

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R+++E G YP VDPL S SR+ D K    +  K+   +  ++ +++E +DI  I 
Sbjct: 324 TTVLSRAISEMGIYPAVDPLESTSRILDPKVVGEEHYKVARGVQEILQKYKELQDIIAIL 383

Query: 394 G 394
           G
Sbjct: 384 G 384


>gi|160942705|ref|ZP_02089947.1| hypothetical protein FAEPRAM212_00181 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445979|gb|EDP22982.1| hypothetical protein FAEPRAM212_00181 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104091|emb|CBL01635.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 464

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 159/305 (52%), Gaps = 10/305 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GRV N LG+P+D +      D    I    P    +Q   +  +TGI+V+D+ 
Sbjct: 82  PVGDQCLGRVFNLLGEPVD-NKPAPTPDAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +    
Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++
Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A +G YP VDPL S SR L+ +    +  ++  ++  ++ R++E +DI
Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARAVQKVLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAIMG 383


>gi|110635547|ref|YP_675755.1| F0F1 ATP synthase subunit beta [Mesorhizobium sp. BNC1]
 gi|118573695|sp|Q11DD5|ATPB_MESSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110286531|gb|ABG64590.1| ATP synthase F1 subcomplex beta subunit [Chelativorans sp. BNC1]
          Length = 519

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 15/306 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GR+IN +G+P+D    +   +    I    P  + +    +   TGI+V+D+  P   
Sbjct: 131 MLGRIINVIGEPVDEAGPITATEFRG-IHQPAPEYVEQSTEAQILVTGIKVLDLLAPYAR 189

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL--- 210
           G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +   
Sbjct: 190 GGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKK 249

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AEYF  +G +VL  +D+I RF  +  E+
Sbjct: 250 GGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGSEV 309

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 310 SALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 367

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R+++E+G YP VDPL S SR+ D     +E  ++  ++   + R++  +D
Sbjct: 368 AHLDATTVLSRAISEKGIYPAVDPLDSTSRMLDPQIVGEEHYQVARAVQQTLQRYKSLQD 427

Query: 389 IRLIGG 394
           I  I G
Sbjct: 428 IIAILG 433


>gi|126667608|ref|ZP_01738577.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
 gi|126627877|gb|EAZ98505.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
          Length = 464

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G+ +L   I  K P   ++       +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEQGPIGEEEL-WAIHRKAPGYADQAASADLLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  E++   G +
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 260

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  S LD  +
Sbjct: 261 PSAVGYQPTLAQEMGELQERI--TSTKSGSITSIQAVYVPADDLTDPSPATTFSHLDATV 318

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +A +G YP +DPL S SR  D     ++   V+  + +++ R++E +DI  I G
Sbjct: 319 VLSRDIASKGIYPAIDPLDSTSRQLDPLVIGEQHYAVARGVQNVLQRYKELKDIIAILG 377


>gi|52841288|ref|YP_095087.1| F0F1 ATP synthase subunit beta [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628399|gb|AAU27140.1| ATP synthase F1, beta chain [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 474

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 165/313 (52%), Gaps = 10/313 (3%)

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V+  G   RI  S    GR++N  G+P+DG   L   +   ++++ + P       E
Sbjct: 85  GLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETHEYR-DVLANLAPLEMTSTQE 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199
              +TGI+VID+  P   G + G+F G+G+GK+ LL   M A         + + VGER 
Sbjct: 144 TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 203

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257
           RE  E   +      + K+++V    DESP +R    L+A+T AEY   + G  VL ++D
Sbjct: 204 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 263

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  EI+   G +P + GY  ++ +E+  L ER+  +   KG +T+V +V V  
Sbjct: 264 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 321

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376
           D+ +DP    + + LD  IVL+R+ A +G YP VDPLAS S+  DK    +    +  ++
Sbjct: 322 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 381

Query: 377 THLIHRFEETRDI 389
              + R++E  D+
Sbjct: 382 REHLERYQELEDM 394


>gi|89095631|ref|ZP_01168525.1| F0F1 ATP synthase subunit beta [Bacillus sp. NRRL B-14911]
 gi|89089377|gb|EAR68484.1| F0F1 ATP synthase subunit beta [Bacillus sp. NRRL B-14911]
          Length = 473

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 168/328 (51%), Gaps = 15/328 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID D +L  G     I  + P         +  +TGI+V+D+  P   G
Sbjct: 92  LGRVFNVLGETIDLDPALQAGIRRDSIHREAPKFEQLSTEVEILETGIKVVDLLAPYIKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +KK+
Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE+F   +G +VL  +D+I RF  +  E++   G +
Sbjct: 212 AMVFGQMNEPPGARMRVALTGLTMAEFFRDDQGQDVLFFMDNIFRFTQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ RL ERI  +    G++T++ ++ V  D++ DP   +  + LD   
Sbjct: 272 PSAVGYQPTLATEMGRLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            L R L+E G YP VDPLAS SR L+ +    +   +   +   + R+ E +DI  I   
Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQSTLQRYRELQDIIAI--- 386

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420
             G+D + D+    VH+   I  +L Q+
Sbjct: 387 -LGMDELSDEDKLVVHRARRIQFYLSQN 413


>gi|57505327|ref|ZP_00371256.1| ATP synthase F1, beta subunit [Campylobacter upsaliensis RM3195]
 gi|57016463|gb|EAL53248.1| ATP synthase F1, beta subunit [Campylobacter upsaliensis RM3195]
          Length = 484

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N  G  ID  + +   D    I  + P A   Q  +   F+TGI+V+D+  P   G
Sbjct: 88  GRIFNVTGDLIDEGEEI-SFDKRWSI-HRDPSAFEDQSTKSEIFETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ ++     +  F      + + VGER RE  +   +    N L K 
Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AEYF  + G +VL+ +D+I RF+ S  E++   G +
Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRI 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+ +  ERI  +  +KG+IT+V +V V  D+  DP   +V + LD   
Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VLNR++AE+G YP VDPL S SR+ D     +E  K+   +  ++ ++++ +DI  I G
Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382


>gi|294155618|ref|YP_003560002.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145]
 gi|291600077|gb|ADE19573.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145]
          Length = 466

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ + LG PID   S     L+   +  +PP    Q+   +  +TGI+VID+  P   
Sbjct: 87  LGRMFDVLGNPIDLLPSQKWNKLNP--IHALPPTYEEQKSTSEILETGIKVIDLLIPYSK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      L K
Sbjct: 145 GGKIGLFGGAGVGKTVLVQELINNIATEHNGLSVFAGVGERTREGNDLYHEMKAAGVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G 
Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   +G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 265 MPSAVGYQPTLATEMGQLQERI--TSTRRGSITSVQAVYVPADDLTDPAPATTFTHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R++A  G YP +DPL S SRL D     +E   +   + +++ RF+E +DI  I G
Sbjct: 323 TVLDRNIAALGIYPAIDPLTSSSRLLDPLVVGNEHYNVAQGVLNILQRFKELQDIIAILG 382


>gi|167899454|ref|ZP_02486855.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 7894]
          Length = 450

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G  R+       GR+++  G P  GDD      D+    + +  P +  Q+     F TG
Sbjct: 8   GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 65

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203
           I+VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  
Sbjct: 66  IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 123

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           E + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ R
Sbjct: 124 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 183

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  
Sbjct: 184 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 241

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I
Sbjct: 242 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 301

Query: 381 HRFEETRDI 389
             + E +D+
Sbjct: 302 EHYRELQDV 310


>gi|118573778|sp|Q5GRU7|ATPB_WOLTR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 480

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 165/308 (53%), Gaps = 21/308 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG   +E + +VPP+   Q++ E+   TGI+VID+  P   G
Sbjct: 87  GRIFNVVGEVIDECGPL-KGKYDLESIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 145

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 203

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF   +  +VL  +D+I RF  +  
Sbjct: 204 VNEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 263

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 264 EISALLGRMPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPAA 321

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             S LD   VL+R +AE G YP VDPL S S+ L+ +    +  K+ S +  ++  ++  
Sbjct: 322 TFSHLDSTTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIVGEEHYKVTSEVKRILQTYKSL 381

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 382 QDIIAILG 389


>gi|15082073|gb|AAK84019.1|AF393838_8 H+-ATPase cytoplasmic F1-part beta-subunit [Lactococcus lactis
           subsp. lactis]
          Length = 469

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  IDG +          I  K P         +   TGI+V+D+  P  
Sbjct: 88  ATLGRVFNVLGDVIDGGEEFAADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYL 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 148 KGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIE 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 208 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD 
Sbjct: 268 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDA 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L + G YP VDPLAS SR L  +    +  ++   +  ++ R++E +DI  I 
Sbjct: 326 TTNLERRLTQMGIYPAVDPLASSSRALTPEIXGEEHYEVAMEVQRVLQRYKELQDIIAIL 385

Query: 394 G 394
           G
Sbjct: 386 G 386


>gi|323699973|ref|ZP_08111885.1| ATP synthase F1, beta subunit [Desulfovibrio sp. ND132]
 gi|323459905|gb|EGB15770.1| ATP synthase F1, beta subunit [Desulfovibrio desulfuricans ND132]
          Length = 465

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 163/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
           GR++N +GKP+D    LG+      + + +  PA   Q  + +  +TGI+V+D+  P   
Sbjct: 91  GRIMNVVGKPVD---ELGEVPCEKRLPIHRAAPAFTEQSTKVELLETGIKVVDLLIPFPK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216
           G ++G+F G+G+GK+ +L     +       IS+   VGER RE  +   +      L+K
Sbjct: 148 GGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LTA+T AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 AALVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  + LDG 
Sbjct: 268 MPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDGT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +AE G YP VDPL S SR L+     A+       +  ++ ++++ +DI  I G
Sbjct: 326 LVLSRQIAELGIYPAVDPLDSTSRILSPDVLGAEHYNTAREVQSVLQKYKDLQDIIAILG 385


>gi|85713719|ref|ZP_01044709.1| ATP synthase subunit B [Nitrobacter sp. Nb-311A]
 gi|85699623|gb|EAQ37490.1| ATP synthase subunit B [Nitrobacter sp. Nb-311A]
          Length = 476

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 161/313 (51%), Gaps = 15/313 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+   A   GR++N +G+P+D    +   DL   I ++ P   ++    +   TGI+V+D
Sbjct: 81  RVPVGAGTLGRIMNVIGEPVDEGGPIKADDLR-PIHAEAPSYTDQSTEAEILVTGIKVVD 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      EFI
Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199

Query: 207 EDYL----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           E  +    G    K  +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF
Sbjct: 200 ESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEQFRDQGQDVLFFVDNIFRF 259

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  D
Sbjct: 260 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTD 317

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIH 381
           P   +  + LD   VLNR+++E+G YP VDPL S SR+       +E    + +   ++ 
Sbjct: 318 PAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQ 377

Query: 382 RFEETRDIRLIGG 394
           R++  +DI  I G
Sbjct: 378 RYKSLQDIIAILG 390


>gi|320354740|ref|YP_004196079.1| ATP synthase F1 subcomplex subunit beta [Desulfobulbus propionicus
           DSM 2032]
 gi|320123242|gb|ADW18788.1| ATP synthase F1 subcomplex beta subunit [Desulfobulbus propionicus
           DSM 2032]
          Length = 473

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 9/302 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR++N +G+P+DG   +   + SM I    P  + +       +TGI+VID+  P 
Sbjct: 90  APALGRIMNVVGRPVDGMGPISS-EKSMPIHRPAPLFIEQDTEVNVLETGIKVIDLLVPF 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G GK+ ++     +       IS+   VGER RE  +   +      L
Sbjct: 149 PRGGKMGLFGGAGCGKTVIMMEMVNNIAMQHGGISVFCGVGERTREGNDLYNEMKESGVL 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V     E P  R    LT +T AEYF   +G +VL  +D+I RF  +  E++   
Sbjct: 209 PKAALVYGQMTEPPGARSRVALTGLTAAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ ++L  L ERI  +   KG+ITAV  V V  D+  DP   +  + LD
Sbjct: 269 GRIPSAVGYQPTLATDLGALQERI--TSTTKGSITAVQCVYVPADDLTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
           G +VL+R +AE G YP VDPL S SR+ D      E  +    +   + +++E +DI  I
Sbjct: 327 GTVVLSRQIAELGIYPAVDPLDSTSRILDPNVVGQEHYQTARGVQVALQKYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|302334943|ref|YP_003800150.1| ATP synthase F1 subcomplex beta subunit [Olsenella uli DSM 7084]
 gi|301318783|gb|ADK67270.1| ATP synthase F1 subcomplex beta subunit [Olsenella uli DSM 7084]
          Length = 493

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 12/312 (3%)

Query: 89  HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKT 147
           H     + PS    GRV N +G+P+DG ++    D+    +    PA      +   F+T
Sbjct: 100 HPMMMPVGPSTL--GRVWNVMGQPVDGGET--PTDVQFYPIHHPAPAFEELTTQTEIFET 155

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVRE 204
           GI+ ID+  P   G + G+F G+G+GK+ L+     +   +     + + VGER RE  +
Sbjct: 156 GIKAIDLLEPYVRGGKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTD 215

Query: 205 -FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            F+E      + K+ +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+
Sbjct: 216 LFLEMTESGVINKTCLVYGQMNEPPGARLRVGLAGLTTAEYFRDQGQDVLLFIDNIFRFS 275

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP
Sbjct: 276 QAGSEVSALLGRMPSAVGYQPTLATEMGDLQERI--TSTKEGSITSVQAVYVPADDLTDP 333

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+RS+ E G YP VDPLAS S   D +   +E  ++  ++   + +
Sbjct: 334 APATTFTHLDATTVLSRSITELGIYPAVDPLASSSSALDPSVVGEEHYRVAMAVQETLQQ 393

Query: 383 FEETRDIRLIGG 394
           + + +DI  I G
Sbjct: 394 YSDLQDIIAILG 405


>gi|289435790|ref|YP_003465662.1| ATP synthase F1, beta subunit [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172034|emb|CBH28580.1| ATP synthase F1, beta subunit [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 473

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  ID D+ L       +I  + P         +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR        +E   V++ +  L+ R++E +DI  I 
Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|266620417|ref|ZP_06113352.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
 gi|288867994|gb|EFD00293.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
          Length = 468

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 13/309 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVI 152
           R+       GR+ N LG+ ID  + L +G+    ++ + PP+   Q  V +  +TGI+VI
Sbjct: 78  RVPVGEQTLGRLFNVLGETIDNGEPLKEGE--KWVIHRDPPSFEEQSPVAEILETGIKVI 135

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   + 
Sbjct: 136 DLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTE- 194

Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
           +G++  ++K+ +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  + 
Sbjct: 195 MGESGVIEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHKNVLLFIDNIFRFVQAG 254

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G++T+V +V V  D+  DP   
Sbjct: 255 SEVSALLGRMPSAVGYQPTLATEMGELQERI--TSTKNGSVTSVQAVYVPADDLTDPAPA 312

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEE 385
           +  + LD   VL+R + E+G YP VDPL S SR+ +     +E   V+ +    + ++ E
Sbjct: 313 TTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEPDVVGEEHYEVARMVQETLQKYRE 372

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 373 LQDIIAILG 381


>gi|116873893|ref|YP_850674.1| F0F1 ATP synthase subunit beta [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466611|sp|A0ALL3|ATPB2_LISW6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|116742771|emb|CAK21895.1| ATP synthase F1, beta subunit [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 473

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  ID D+ L       +I  + P         +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR        +E   V++ +  L+ R++E +DI  I 
Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|304373021|ref|YP_003856230.1| Proton-translocating ATPase, beta subunit [Mycoplasma hyorhinis
           HUB-1]
 gi|304309212|gb|ADM21692.1| Proton-translocating ATPase, beta subunit [Mycoplasma hyorhinis
           HUB-1]
          Length = 470

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LGK ID   +     L  EI S  P  ++++   +   TGI+VID+  P   G +
Sbjct: 96  RMFNVLGKVIDEKPAPVFEQLK-EIHSPAPSYVDQKASSEILVTGIKVIDLLIPFVKGGK 154

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E      L K+ +
Sbjct: 155 IGLFGGAGVGKTVLVQELINNVATEHGGLSVFAGVGERSREGNDLYFEMEAAGVLDKTAL 214

Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P 
Sbjct: 215 VFGQMNEPPGARMRVALSALTMAEYFRDQENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 274

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ +E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  S LD   VL
Sbjct: 275 TVGYQPTLATEMGQLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVL 332

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R++A  G YP VDPLAS SR+ D      E   V+  +   + RF+E +DI  I G
Sbjct: 333 DRNIASLGIYPAVDPLASGSRILDPLIVGQEHYNVARQVIQTLQRFKELQDIIAILG 389


>gi|86609936|ref|YP_478698.1| F0F1 ATP synthase subunit beta [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|118573768|sp|Q2JIV9|ATPB_SYNJB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86558478|gb|ABD03435.1| ATP synthase F1, beta subunit [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 477

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D  + +   + +  I    PP ++     + F+TGI+VID+  P   G
Sbjct: 98  LGRIFNVLGEPVDQGEPVQAQEFA-PIHRSAPPLVDLTIKPEPFETGIKVIDLLAPFKKG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      L K 
Sbjct: 157 GKVGLFGGAGVGKTVLIQELIHNIAEEHSGLSVFAGVGERTREGNDLYNEMKESGVLDKV 216

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 217 ALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRM 276

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 277 PSAVGYQPTLATEMGNLQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDSTV 334

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RSLA +G YP VDPL S S +       +E      ++   + R++E +DI  I G
Sbjct: 335 VLSRSLAAKGIYPAVDPLDSSSTILQADIVGEEHYNTARAVKQTLQRYKELQDIIAILG 393


>gi|58584946|ref|YP_198519.1| F0F1 ATP synthase subunit beta [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58419262|gb|AAW71277.1| F0F1-type ATP synthase, beta subunit [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
          Length = 488

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 165/308 (53%), Gaps = 21/308 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG   +E + +VPP+   Q++ E+   TGI+VID+  P   G
Sbjct: 95  GRIFNVVGEVIDECGPL-KGKYDLESIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 153

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 154 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 211

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF   +  +VL  +D+I RF  +  
Sbjct: 212 VNEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 271

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 272 EISALLGRMPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPAA 329

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             S LD   VL+R +AE G YP VDPL S S+ L+ +    +  K+ S +  ++  ++  
Sbjct: 330 TFSHLDSTTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIVGEEHYKVTSEVKRILQTYKSL 389

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 390 QDIIAILG 397


>gi|317494643|ref|ZP_07953055.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917245|gb|EFV38592.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 459

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ D    I  + P        ++  +TGI+V+D+  P  
Sbjct: 82  ATLGRIMNVLGEPIDMKGDIGEED-RWAIHREAPSYEELSNSQELLETGIKVMDLICPFA 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 141 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 201 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 260

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 261 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 318

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 378


>gi|313115085|ref|ZP_07800574.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622599|gb|EFQ06065.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 470

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ + LG+PIDG  S+   D+    I  K P    ++   +  +TGI+VID+  P   G
Sbjct: 86  GRMFDPLGRPIDGKGSVD--DVPHWPIHRKAPSFAEQKPATEILETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNESGVLNKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +EL  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLANELGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPLAS SR+ +     +E  ++   +  ++ R++E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQSILQRYQELQDIIAILG 380


>gi|16801734|ref|NP_472002.1| F0F1 ATP synthase subunit beta [Listeria innocua Clip11262]
 gi|81853853|sp|Q927W4|ATPB2_LISIN RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|16415209|emb|CAC97899.1| atpD [Listeria innocua Clip11262]
          Length = 473

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  ID D+ L       +I  + P         +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR L+      +  ++ + +  L+ R++E +DI  I 
Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYEVATEVQRLLQRYKELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|225028203|ref|ZP_03717395.1| hypothetical protein EUBHAL_02475 [Eubacterium hallii DSM 3353]
 gi|224954515|gb|EEG35724.1| hypothetical protein EUBHAL_02475 [Eubacterium hallii DSM 3353]
          Length = 464

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID    + +G     I  K P    +    +  +TGI+V+D+  P   G 
Sbjct: 90  GRIFNVLGEPID-KKPVPEGVKRNPIHRKAPTFAEQATETEILETGIKVVDLLCPYQKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+    R+   +     + + VGER RE  + + E      + K+ 
Sbjct: 149 KIGLFGGAGVGKTVLIQELIRNVATEHGGYSVFTGVGERTREGNDLYTEMSESGVIDKTA 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +TIAE F  +G  +VLL +D+I RF  +  E++   G +P
Sbjct: 209 MVFGQMNEPPGARMRVGLTGLTIAENFRDEGGKDVLLFIDNIFRFTQAGSEVSALLGRVP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 269 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++ E+G YP VDPL S SR+ D     +E  ++   +  ++ R++E +DI  I G
Sbjct: 327 LSRAIVEQGIYPAVDPLESTSRILDPRIVGEEHYQVARGVQEILQRYKELQDIIAILG 384


>gi|209883747|ref|YP_002287604.1| ATP synthase F1, beta subunit [Oligotropha carboxidovorans OM5]
 gi|226740656|sp|B6JD09|ATPB_OLICO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|209871943|gb|ACI91739.1| ATP synthase F1, beta subunit [Oligotropha carboxidovorans OM5]
          Length = 476

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 159/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    + K D +  I  + P    +    +   TGI+V+D+  P   G 
Sbjct: 90  GRIMNVVGEPVDEGGPV-KADGTRAIHQEAPAYTEQSTEAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL---- 210
           +IG+F G+G+GK+ L+       A++     V    VGER RE      EFIE  +    
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAG-VGERTREGNDLYHEFIESGVNKKG 207

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G    K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++
Sbjct: 208 GGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVS 267

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  +
Sbjct: 268 ALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSFA 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDI 389
            LD   VLNR+++E+G YP VDPL S SR+       +E    + +   ++ R++  +DI
Sbjct: 326 HLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLVVGEEHYQTARMVQQVLQRYKSLQDI 385

Query: 390 RLIGG 394
             I G
Sbjct: 386 IAILG 390


>gi|283795522|ref|ZP_06344675.1| ATP synthase F1, beta subunit [Clostridium sp. M62/1]
 gi|291077188|gb|EFE14552.1| ATP synthase F1, beta subunit [Clostridium sp. M62/1]
 gi|295091202|emb|CBK77309.1| ATP synthase F1 subcomplex beta subunit [Clostridium cf.
           saccharolyticum K10]
          Length = 462

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ IDG +SL +G+    I    P   +++ V +  +TGI+VID+  P   G 
Sbjct: 86  GRLFNVLGETIDGGESL-EGEEHWVIHRDPPSFADQKPVVEILETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+    ++   +     I + VGER RE  + + E      L K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLSKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDREHQDVLLFIDNIFRFVQAGSEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +++  G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLATEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R + E+G YP VDPL S SR+ +     +E  +    +  ++ +++E +DI  I G
Sbjct: 323 LSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYETARRVQEVLQKYKELQDIIAILG 380


>gi|116618945|ref|YP_819316.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431390|ref|ZP_03913441.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122270855|sp|Q03V29|ATPB_LEUMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28193535|emb|CAD48595.1| F1F0-ATPase subunit beta [Leuconostoc mesenteroides subsp.
           mesenteroides]
 gi|116097792|gb|ABJ62943.1| ATP synthase F1 subcomplex beta subunit [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|227352853|gb|EEJ43028.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 466

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 154/296 (52%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+D + ++        I    P         +  +TGI+VID+  P  
Sbjct: 85  ATLGRVFNVLGEPVDNNGAIASDVRRSSIHRDAPKYDELTSSTEILETGIKVIDLLAPYV 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      LK
Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMEESGVLK 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AE F  ++G +VLL +D+I RF  +  E++   G
Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
              L R+L ++G YP VDPLAS S   D      E  ++ + +   + R+ E +DI
Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDI 378


>gi|322815479|gb|EFZ24127.1| ATPase beta subunit, putative [Trypanosoma cruzi]
          Length = 518

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 159/301 (52%), Gaps = 20/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+    M I +  P   ++   +    TGI+VID+  P C G 
Sbjct: 116 GRIFNVLGDAIDQRGHVGEKQ-RMPIHAVAPKLADQAAEDTILTTGIKVIDLILPYCKGG 174

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE--------VREFIEDYL 210
           +IG+F G+G+GK+     L++  A+      V    VGER RE        ++  + D  
Sbjct: 175 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 233

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           GD+  K V+V    +E P  R     +A+T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 234 GDS--KCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEV 291

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++  +L +L ERI  +   KG+IT+V +V V  D+  DP   +  
Sbjct: 292 SALLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTF 349

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           S LD   VL+R++AE G YP V+PL   SR+ D    S D   +   +  ++ +++E +D
Sbjct: 350 SHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYKELQD 409

Query: 389 I 389
           I
Sbjct: 410 I 410


>gi|71661631|ref|XP_817834.1| ATPase beta subunit [Trypanosoma cruzi strain CL Brener]
 gi|70883049|gb|EAN95983.1| ATPase beta subunit, putative [Trypanosoma cruzi]
          Length = 518

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 159/301 (52%), Gaps = 20/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+    M I +  P   ++   +    TGI+VID+  P C G 
Sbjct: 116 GRIFNVLGDAIDQRGPVGEKQ-RMPIHAVAPKLADQAAEDTILTTGIKVIDLILPYCKGG 174

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE--------VREFIEDYL 210
           +IG+F G+G+GK+     L++  A+      V    VGER RE        ++  + D  
Sbjct: 175 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 233

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           GD+  K V+V    +E P  R     +A+T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 234 GDS--KCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEV 291

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++  +L +L ERI  +   KG+IT+V +V V  D+  DP   +  
Sbjct: 292 SALLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTF 349

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           S LD   VL+R++AE G YP V+PL   SR+ D    S D   +   +  ++ +++E +D
Sbjct: 350 SHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYKELQD 409

Query: 389 I 389
           I
Sbjct: 410 I 410


>gi|296106670|ref|YP_003618370.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
           2300/99 Alcoy]
 gi|295648571|gb|ADG24418.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
           2300/99 Alcoy]
          Length = 465

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 10/313 (3%)

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V+  G   RI  S    GR++N  G+P+DG   L   +   ++++   P       E
Sbjct: 76  GLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETHEYR-DVLANFAPLEMTSTQE 134

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199
              +TGI+VID+  P   G + G+F G+G+GK+ LL   M A         + + VGER 
Sbjct: 135 TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 194

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257
           RE  E   +      + K+++V    DESP +R    L+A+T AEY   + G  VL ++D
Sbjct: 195 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 254

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  EI+   G +P + GY  ++ +E+  L ER+  +   KG +T+V +V V  
Sbjct: 255 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 312

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376
           D+ +DP    + + LD  IVL+R+ A +G YP VDPLAS S+  DK    +    +  ++
Sbjct: 313 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 372

Query: 377 THLIHRFEETRDI 389
              + R++E  D+
Sbjct: 373 REHLERYQELEDM 385


>gi|302341729|ref|YP_003806258.1| ATP synthase F1, subunit beta [Desulfarculus baarsii DSM 2075]
 gi|301638342|gb|ADK83664.1| ATP synthase F1, beta subunit [Desulfarculus baarsii DSM 2075]
          Length = 469

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 171/329 (51%), Gaps = 16/329 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+N +G+P+DG   +   +    I    P  +++       +TG++VID+  P  
Sbjct: 88  AILGRVLNVVGRPVDGLGPVNAKEY-FPIHRPAPSLVDQDTSVNVLETGVKVIDLLVPFP 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ ++     +       IS+   VGER RE  +   +      + 
Sbjct: 147 RGGKMGMFGGAGVGKTVIMMEMIHNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVIS 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V     E P  R    ++A+T AEY+   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KAALVYGQMTEPPGARARVAISALTTAEYYRDVQGQDVLLFVDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ ++L  L ERI  +   KG+IT+V  V V  D+  DP   +  + LDG
Sbjct: 267 RMPSAVGYQPTLGTDLGELQERI--TSTTKGSITSVQCVYVPADDLTDPAPATTFAHLDG 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIRLIG 393
            +VL+R ++E G YP VDPL S SR+ D  +  +E   V+    +I  ++++ +DI  I 
Sbjct: 325 TVVLSRQISELGIYPAVDPLDSTSRILDPNYLGEEHYGVARKVQMILQKYKDLQDIIAI- 383

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419
               G+D + D+    VH+   I  FL Q
Sbjct: 384 ---LGMDELSDEDKITVHRARRIQRFLSQ 409


>gi|300250972|gb|ADJ95799.1| ATP synthase [Helicoverpa zea]
          Length = 516

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 166/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  ++    ++   TGI+V+
Sbjct: 122 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 180

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     +E
Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYQE 239

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 240 MIESGVISLKDKTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 357

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 417

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 418 LQDYKSLQDIIAILG 432


>gi|189499031|ref|YP_001958501.1| F0F1 ATP synthase subunit beta [Chlorobium phaeobacteroides BS1]
 gi|226740178|sp|B3EJK9|ATPB_CHLPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189494472|gb|ACE03020.1| ATP synthase F1, beta subunit [Chlorobium phaeobacteroides BS1]
          Length = 462

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PIDG   + K + S  I    P         + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGDPIDGKGPV-KSEKSYSIHRPTPKFDVLSTKSEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +   S+   VGER RE  +  E+      + K+
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWEEMKESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT ++IAEYF  + + +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI      KG++T+V ++ V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLGTEMGELQDRI--VSTNKGSVTSVQAIYVPADDLTDPAPATAFTHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     DE      ++  L+ R+++ +DI  I G
Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDEHYNTAQAVKSLLQRYKDLQDIIAILG 381


>gi|255004306|ref|ZP_05279107.1| F0F1 ATP synthase subunit beta [Anaplasma marginale str. Virginia]
          Length = 486

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 179/342 (52%), Gaps = 20/342 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S GD     G   ++P      GRV + LG+PIDG  S+   D+   
Sbjct: 67  MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 125

Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182
            +    P+++ QRV  +   TGI+V+D+  P   G ++G+F G+G+GK+     L+S  A
Sbjct: 126 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 185

Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234
           R+     V    VGER RE     RE +E  +   D   KS  V+V    +E P  R   
Sbjct: 186 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 244

Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF  S+G +VL  +D++ RF  S  E++   G +P A GY  ++ +E+  +
Sbjct: 245 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 304

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +    G+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 305 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 362

Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L S S+ L+ +   ++   +   +  ++  ++  +DI  I G
Sbjct: 363 LESTSQALSPEVVGSEHYDVAQEVKRILQTYKSLQDIIAILG 404


>gi|260437517|ref|ZP_05791333.1| ATP synthase F1, beta subunit [Butyrivibrio crossotus DSM 2876]
 gi|292810150|gb|EFF69355.1| ATP synthase F1, beta subunit [Butyrivibrio crossotus DSM 2876]
          Length = 463

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ ID +    + +  + I  K P    +    +  +TGI+V+D+  P   G 
Sbjct: 90  GRIFNVLGEAID-NKPAPEVEQYLPIHRKAPSFEEQSTSTEILETGIKVVDLLCPYQKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + K+ 
Sbjct: 149 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMQESGVINKTT 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF  +G  +VLL +D+I RF  +  E++   G +P
Sbjct: 209 MVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 269 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+ E G YP VDPL S SR+ D     +E  K+   +  ++ +++E +DI  I G
Sbjct: 327 LDRSIVELGIYPAVDPLGSSSRILDPRIVGEEHYKVARGVQEILQKYKELQDIIAILG 384


>gi|317050178|ref|YP_004117826.1| ATP synthase F1 subunit beta [Pantoea sp. At-9b]
 gi|316951795|gb|ADU71270.1| ATP synthase F1, beta subunit [Pantoea sp. At-9b]
          Length = 465

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID    L + D S+  +S +    P   ++   ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPIDMKGDLKEEDGSVPEVSSIHRAAPSYEDQSNSQELLETGIKVIDLM 142

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 143 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDS 202

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 203 NVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E +DI 
Sbjct: 321 LDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQELKDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|57234667|ref|YP_181307.1| F0F1 ATP synthase subunit beta [Dehalococcoides ethenogenes 195]
 gi|118573525|sp|Q3Z8Z2|ATPB_DEHE1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|57225115|gb|AAW40172.1| ATP synthase F1, beta subunit [Dehalococcoides ethenogenes 195]
          Length = 464

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + K + +M I    P     +   +  +TG++VID+  P   G
Sbjct: 85  LGRIFNVLGEPLDNRGDV-KAEKTMPIHRSAPAMDELESSAQVLETGLKVIDLIAPFARG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG   G+G+GK+ L+    R+   +    S+   VGER RE  +   +      L K+
Sbjct: 144 GKIGALGGAGVGKTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEMEDSGVLPKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P +R    LT +T+AEYF   +  +VLL +D+I R+  +  E++   G +
Sbjct: 204 TMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +++  G+IT+  +V V  D++ DP   +    LD  I
Sbjct: 264 PSAVGYQPTLATEMGALQERIASTKQ--GSITSFQAVYVPADDYTDPGVVATFGHLDAMI 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L RSLAE+  YP VDPLAS SR+ D     +E  ++   +  ++ R+++ +D+  I G
Sbjct: 322 ALERSLAEQALYPAVDPLASNSRILDPQVVGEEHYQVARDVQKVLQRYKDLQDVIAILG 380


>gi|326792679|ref|YP_004310500.1| ATP synthase F1 subunit beta [Clostridium lentocellum DSM 5427]
 gi|326543443|gb|ADZ85302.1| ATP synthase F1, beta subunit [Clostridium lentocellum DSM 5427]
          Length = 463

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 159/301 (52%), Gaps = 16/301 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           GR+ N  G  +DG     K D  +E   I  + P    +    +  +TGI+V+D+  P  
Sbjct: 89  GRIFNVTGHAVDG-----KPDPQVEKWPIHREAPSFEEQSTSAEILETGIKVVDLICPYL 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + 
Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLYHEMTDSGVIA 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++   G
Sbjct: 204 KTTMVFGQMNEPPGARMRVALTGLTMAEYFRDQSGQDVLLFVDNIFRFTQAGSEVSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
             P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 264 RTPSAVGYQPTLATEMGTLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+R++ E+G YP VDPL S SR+ D     +E   V+  +  ++ R++E +DI  I 
Sbjct: 322 KTVLSRAIVEQGIYPAVDPLESSSRVLDPQIVGEEHYSVARGVQSILQRYKELQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|15673746|ref|NP_267920.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281492356|ref|YP_003354336.1| ATP synthase F1 subunit beta [Lactococcus lactis subsp. lactis
           KF147]
 gi|22653662|sp|Q9CES0|ATPB_LACLA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12724786|gb|AAK05862.1|AE006406_6 ATP synthase alpha subunit [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281376020|gb|ADA65511.1| ATP synthase F1, beta subunit [Lactococcus lactis subsp. lactis
           KF147]
 gi|326407250|gb|ADZ64321.1| F-type H+-transporting ATPase subunit beta [Lactococcus lactis
           subsp. lactis CV56]
          Length = 469

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  IDG +          I  K P         +   TGI+V+D+  P  
Sbjct: 88  ATLGRVFNVLGDVIDGGEEFAADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYL 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 148 KGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIE 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 208 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD 
Sbjct: 268 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDA 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L + G YP VDPLAS SR L  +    +  ++   +  ++ R++E +DI  I 
Sbjct: 326 TTNLERRLTQMGIYPAVDPLASSSRALTPEIVGEEHYEVAMEVQRVLQRYKELQDIIAIL 385

Query: 394 G 394
           G
Sbjct: 386 G 386


>gi|1168582|sp|P42469|ATPB_STIAU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|587526|emb|CAA54206.1| ATPase beta-subunit [Stigmatella aurantiaca]
          Length = 481

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 163/305 (53%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +     +  I    P  +++    + F+TGI+VID+  P   G 
Sbjct: 96  GRILNVIGEPVDERGPITSSQ-TWPIHRPAPTFVDQDVRVQAFETGIKVIDLLGPYTRGG 154

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLK---- 215
           +IG+F G+G+GK+ LL     +   ++    + + VGER RE  +   +    N+     
Sbjct: 155 KIGLFGGAGVGKTVLLMELIVNVAKERGGFSVFAGVGERTREGNDLYHEMQEGNVSTPRT 214

Query: 216 ----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               + V+V    +E P  R    L+A+TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 215 WMESQCVLVYGQMNEPPGARARVALSALTIAEYFRDMEGHDVLLFVDNIFRFTQAGSEVS 274

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG++T+V ++ V  D+  DP   +  +
Sbjct: 275 ALLGRIPSAVGYQPTLSTEMGALQERI--TSTTKGSVTSVQAIYVPADDLTDPAPATTFA 332

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VLNR+++E G YP VDPL S SR+ D      E   V+  +  ++ +++E +DI
Sbjct: 333 HLDATTVLNRAISELGIYPAVDPLDSTSRILDPNVVGPEHYAVARKVQGILQKYKELQDI 392

Query: 390 RLIGG 394
             I G
Sbjct: 393 IAILG 397


>gi|313631943|gb|EFR99076.1| ATP synthase F1, beta subunit [Listeria seeligeri FSL N1-067]
          Length = 391

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  ID D+ L       +I  + P         +  +TGI+V+D+  P  
Sbjct: 8   VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 67

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 68  KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 127

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 128 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 187

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 188 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 245

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR        +E   V++ +  L+ R++E +DI  I 
Sbjct: 246 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 305

Query: 394 G 394
           G
Sbjct: 306 G 306


>gi|291546602|emb|CBL19710.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus sp. SR1/5]
          Length = 465

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 165/300 (55%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG  +DG DSL  G+    ++ + PP+   Q+   +  +TGI+VID+  P   
Sbjct: 85  LGRLFNVLGDTVDGGDSL-DGEEHW-VIHRDPPSFEEQKPAVEILETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+    ++   +     I + VGER RE  + + E      L+K
Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHRDVLLFIDNIFRFVQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +++  G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEADIVGEEHYEVARRVQEILQKYKELQDIIAILG 380


>gi|193214200|ref|YP_001995399.1| F0F1 ATP synthase subunit beta [Chloroherpeton thalassium ATCC
           35110]
 gi|226740179|sp|B3QUP6|ATPB_CHLT3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|193087677|gb|ACF12952.1| ATP synthase F1, beta subunit [Chloroherpeton thalassium ATCC
           35110]
          Length = 465

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 163/301 (54%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVE-KGFKTGIRVIDIFTPLC 159
            GR++N +GKPIDG   LG+   +       P PA +    + + F+TGI+VID+  P  
Sbjct: 86  LGRMLNVVGKPIDG---LGEVHATKTYSIHRPSPAFDELSTKAEMFETGIKVIDLLEPYS 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G + G+F G+G+GK+ L+     +    +    + + VGER RE  +  E+      + 
Sbjct: 143 RGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEMKESGVID 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LTA++IAEYF  + + +VLL +D+I RF  +  E++   G
Sbjct: 203 KTALVFGQMNEPPGARARVALTALSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI     +KG+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLATEMGALQERI--VSTKKGSITSVQAIYVPADDLTDPAPATTFTHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+RS+AE G YP VDPL S SR+ D      D      ++  ++ R+++ +DI  I 
Sbjct: 321 TTVLSRSIAELGIYPAVDPLDSTSRILDPNIIGRDHYDTAQAVKQILQRYKDLQDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|16804567|ref|NP_466052.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes EGD-e]
 gi|46908701|ref|YP_015090.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47094108|ref|ZP_00231832.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|47096952|ref|ZP_00234528.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217963368|ref|YP_002349046.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23]
 gi|224499882|ref|ZP_03668231.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes Finland
           1988]
 gi|224503231|ref|ZP_03671538.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL R2-561]
 gi|226225077|ref|YP_002759184.1| H+-transporting ATP synthase chain beta [Listeria monocytogenes
           Clip81459]
 gi|254825348|ref|ZP_05230349.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J1-194]
 gi|254828104|ref|ZP_05232791.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           N3-165]
 gi|254831048|ref|ZP_05235703.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 10403S]
 gi|254853942|ref|ZP_05243290.1| atpD [Listeria monocytogenes FSL R2-503]
 gi|254900333|ref|ZP_05260257.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes J0161]
 gi|254932229|ref|ZP_05265588.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes
           HPB2262]
 gi|254937809|ref|ZP_05269506.1| ATP synthase F1 [Listeria monocytogenes F6900]
 gi|254994238|ref|ZP_05276428.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-064]
 gi|255025914|ref|ZP_05297900.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-003]
 gi|255519775|ref|ZP_05387012.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J1-175]
 gi|284802967|ref|YP_003414832.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578]
 gi|284996108|ref|YP_003417876.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923]
 gi|290892692|ref|ZP_06555684.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J2-071]
 gi|300764971|ref|ZP_07074959.1| ATP synthase F1, beta subunit [Listeria monocytogenes FSL N1-017]
 gi|81830121|sp|Q71WP9|ATPB2_LISMF RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|81849742|sp|Q8Y4C1|ATPB2_LISMO RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|16412017|emb|CAD00607.1| atpD [Listeria monocytogenes EGD-e]
 gi|46881973|gb|AAT05267.1| ATP synthase F1, beta subunit [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47014662|gb|EAL05619.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47017515|gb|EAL08324.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|217332638|gb|ACK38432.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23]
 gi|225877539|emb|CAS06253.1| Putative H+-transporting ATP synthase chain beta [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258600489|gb|EEW13814.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           N3-165]
 gi|258607331|gb|EEW19939.1| atpD [Listeria monocytogenes FSL R2-503]
 gi|258610413|gb|EEW23021.1| ATP synthase F1 [Listeria monocytogenes F6900]
 gi|284058529|gb|ADB69470.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578]
 gi|284061575|gb|ADB72514.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923]
 gi|290557752|gb|EFD91274.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J2-071]
 gi|293583786|gb|EFF95818.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes
           HPB2262]
 gi|293594591|gb|EFG02352.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J1-194]
 gi|300514271|gb|EFK41330.1| ATP synthase F1, beta subunit [Listeria monocytogenes FSL N1-017]
 gi|307572056|emb|CAR85235.1| ATP synthase F1, beta subunit [Listeria monocytogenes L99]
 gi|328465133|gb|EGF36401.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 1816]
 gi|328471139|gb|EGF42043.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 220]
 gi|332312959|gb|EGJ26054.1| ATP synthase subunit beta [Listeria monocytogenes str. Scott A]
          Length = 473

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  ID D+ L       +I  + P         +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR        +E   V++ +  L+ R++E +DI  I 
Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|227824602|ref|ZP_03989434.1| ATP synthase F1 beta subunit [Acidaminococcus sp. D21]
 gi|226905101|gb|EEH91019.1| ATP synthase F1 beta subunit [Acidaminococcus sp. D21]
          Length = 492

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 163/315 (51%), Gaps = 11/315 (3%)

Query: 88  FHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGF 145
           F  G     P    C GRV N LG+ +D D +         I  +  PA++ Q  E K  
Sbjct: 97  FDTGHPITVPVGKGCLGRVFNVLGEAVDDDPTPVDASEYWPI-HRPAPALSEQSTETKIM 155

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREV 202
           +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + S VGER RE 
Sbjct: 156 ETGIKVVDLIAPYALGGKIGLFGGAGVGKTVLIMELIHNVATNHGGYSVFSGVGERTREG 215

Query: 203 REFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            +   +      + K+ +V    +E P  R    LT +T+AEYF  +   +VLL +D+I 
Sbjct: 216 NDLWGEMKESGVIDKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDAMSQDVLLFIDNIF 275

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +EL  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 276 RFIQAGSEVSALLGRMPSAVGYQPTLANELGALEERI--TSTKNGSITSVQAVYVPADDL 333

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  S LD   VL+R + E G YP VDPLAS SR+ D     +E  K+   +  +
Sbjct: 334 TDPAPAATFSHLDATTVLSREIVELGIYPAVDPLASTSRILDPLIIGEEHYKVARGVQEI 393

Query: 380 IHRFEETRDIRLIGG 394
           + R++E +DI  I G
Sbjct: 394 LQRYKELQDIIAILG 408


>gi|332523894|ref|ZP_08400146.1| ATP synthase F1, beta subunit [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315158|gb|EGJ28143.1| ATP synthase F1, beta subunit [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 468

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG  ID ++   + D   E + K  PA +         +TGI+VID+  P   
Sbjct: 89  LGRVFNVLGDTIDLEEPFSE-DAEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|293596677|ref|ZP_05263440.2| ATP synthase F1 [Listeria monocytogenes J2818]
 gi|293591435|gb|EFF99769.1| ATP synthase F1 [Listeria monocytogenes J2818]
 gi|308445540|gb|ADO32958.1| AtpD [Listeria monocytogenes]
          Length = 479

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  ID D+ L       +I  + P         +  +TGI+V+D+  P  
Sbjct: 96  VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 156 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 215

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 216 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 275

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 276 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 333

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR        +E   V++ +  L+ R++E +DI  I 
Sbjct: 334 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 393

Query: 394 G 394
           G
Sbjct: 394 G 394


>gi|195402199|ref|XP_002059694.1| ATPsyn-beta [Drosophila virilis]
 gi|194155908|gb|EDW71092.1| ATPsyn-beta [Drosophila virilis]
          Length = 506

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR++N +G+PID    +     S  I ++ P  ++    ++   TGI+V+
Sbjct: 110 IRIPVGAETLGRIMNVIGEPIDERGPIPSAKTS-PIHAEAPEFVDMSVEQEILVTGIKVV 168

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P C G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 169 DLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIF 287

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 345

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 406 LQDYKSLQDIIAILG 420


>gi|315283679|ref|ZP_07871797.1| ATP synthase F1, beta subunit [Listeria marthii FSL S4-120]
 gi|313612678|gb|EFR86702.1| ATP synthase F1, beta subunit [Listeria marthii FSL S4-120]
          Length = 473

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG  ID D+ L       +I  + P         +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
              L R L E+G YP VDPLAS SR        +E   V++ +  L+ R++E +DI  I 
Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387

Query: 394 G 394
           G
Sbjct: 388 G 388


>gi|112791402|gb|ABI21971.1| ATP synthase beta subunit [Erwinia persicina]
          Length = 421

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|167743828|ref|ZP_02416602.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 14]
          Length = 396

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+++  G P  GDD      D+    + +  P +  Q+     F TGI+VID+  PL  
Sbjct: 3   GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 60

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E + D  G   L
Sbjct: 61  GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 118

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   
Sbjct: 119 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 178

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D
Sbjct: 179 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 236

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  + E +D+
Sbjct: 237 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 293


>gi|163783600|ref|ZP_02178589.1| ATP synthase subunit B [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881093|gb|EDP74608.1| ATP synthase subunit B [Hydrogenivirga sp. 128-5-R1-1]
          Length = 477

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 163/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N +G+PID    +   +     M + PPA++ Q  + +  +TGI+VID+  P   
Sbjct: 97  LGRIFNVVGQPIDDQGPVEAKEYWP--MFREPPALDEQSTKVEILETGIKVIDLLEPYVK 154

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDC-FDK--VIISLVGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   F K   ++  VGER RE  + ++E      L  
Sbjct: 155 GGKVGLFGGAGVGKTVLMQELIHNIAKFHKGFSVVVGVGERTREGNDLWLEMKESGVLPY 214

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P +R     T +T+AEYF   +G +VL  +D+I RF  +  E++T  G 
Sbjct: 215 TVMVYGQMNEPPGVRFRVAQTGITMAEYFRDVEGQDVLTFIDNIFRFVQAGSEVSTLLGR 274

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP A GY  ++ +++  + ERI  +  +KG+ITAV +V V  D+  DP   S+ + LD  
Sbjct: 275 LPSAVGYQPTLNTDVGEVQERI--TSTKKGSITAVQAVYVPADDITDPAPYSIFAHLDAT 332

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL R LAE G YP +DPL S S+     +  DE       +  ++ R++E ++I  I G
Sbjct: 333 TVLARRLAELGIYPAIDPLESTSKYLAPEFIGDEHYNTAMEVKRILQRYKELQEIIAILG 392


>gi|19745847|ref|NP_606983.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS8232]
 gi|50913944|ref|YP_059916.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10394]
 gi|94990145|ref|YP_598245.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10270]
 gi|94994061|ref|YP_602159.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10750]
 gi|81822768|sp|Q5XCY0|ATPB_STRP6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81847967|sp|Q8P1K5|ATPB_STRP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573763|sp|Q1JHN5|ATPB_STRPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573764|sp|Q1J7F9|ATPB_STRPF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|19747995|gb|AAL97482.1| putative proton-translocating ATPase, beta subunit [Streptococcus
           pyogenes MGAS8232]
 gi|50903018|gb|AAT86733.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10394]
 gi|94543653|gb|ABF33701.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10270]
 gi|94547569|gb|ABF37615.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10750]
          Length = 468

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|300719162|ref|YP_003743965.1| ATP synthase, F1 complex, beta subunit [Erwinia billingiae Eb661]
 gi|299064998|emb|CAX62118.1| ATP synthase, F1 complex, beta subunit [Erwinia billingiae Eb661]
          Length = 460

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|112791400|gb|ABI21970.1| ATP synthase beta subunit [Erwinia rhapontici]
          Length = 418

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|76818109|ref|YP_336214.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1710b]
 gi|126455751|ref|YP_001076682.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1106a]
 gi|242314092|ref|ZP_04813109.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
 gi|254185911|ref|ZP_04892429.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194214|ref|ZP_04900646.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
 gi|254262510|ref|ZP_04953375.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
 gi|123730761|sp|Q3JJN9|ATPB2_BURP1 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|190358219|sp|A3P8M2|ATPB2_BURP0 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|76582582|gb|ABA52056.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710b]
 gi|126229519|gb|ABN92932.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106a]
 gi|157933597|gb|EDO89267.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|169650965|gb|EDS83658.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
 gi|242137331|gb|EES23734.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
 gi|254213512|gb|EET02897.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
          Length = 528

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G  R+       GR+++  G P  GDD      D+    + +  P +  Q+     F TG
Sbjct: 102 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 159

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203
           I+VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  
Sbjct: 160 IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 217

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           E + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ R
Sbjct: 218 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 277

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  
Sbjct: 278 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 335

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I
Sbjct: 336 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 395

Query: 381 HRFEETRDI 389
             + E +D+
Sbjct: 396 EHYRELQDV 404


>gi|220936460|ref|YP_002515359.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sp. HL-EbGR7]
 gi|254808172|sp|B8GRB8|ATPB_THISH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219997770|gb|ACL74372.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sp. HL-EbGR7]
          Length = 459

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 161/302 (53%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157
            GRV++ LG P+D       GD+  E    + +  P+ + Q    +  +TGI+VID+  P
Sbjct: 83  LGRVMDVLGNPVDN-----AGDVQTEERWSIHRPAPSFDEQAGSTELLETGIKVIDLLCP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N 
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE+F  +G +VL+ +D+I R+  +  E++   
Sbjct: 198 LDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALL 257

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD
Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLD 315

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VL+R +AE G YP VDPL S SR  D     +E      ++ + + R++E +DI  I
Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPQVIGNEHYDTARAVQNTLQRYKELKDIIAI 375

Query: 393 GG 394
            G
Sbjct: 376 LG 377


>gi|153815545|ref|ZP_01968213.1| hypothetical protein RUMTOR_01781 [Ruminococcus torques ATCC 27756]
 gi|317502196|ref|ZP_07960370.1| ATP synthase F1 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088761|ref|ZP_08337671.1| ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847187|gb|EDK24105.1| hypothetical protein RUMTOR_01781 [Ruminococcus torques ATCC 27756]
 gi|316896405|gb|EFV18502.1| ATP synthase F1 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407284|gb|EGG86787.1| ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 462

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 172/326 (52%), Gaps = 14/326 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+ +D  + +   D    ++ + PP    Q  V +  +TGI+VID+  P   
Sbjct: 85  LGRLFNVLGETVDDGEQITDAD--QWVIHRDPPTFEDQSPVVEILETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  + + E      L+K
Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHRNVLLFIDNIFRFTQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E  ++ + +  ++ +++E +DI  I G
Sbjct: 321 TVLSRKVVEQGIYPAVDPLESSSRILEAEIVGEEHYEVANKVIAILQKYKELQDIIAILG 380

Query: 395 YRPGVDLILDKA-VHQVPIIYDFLKQ 419
                D   DKA V +   I  FL Q
Sbjct: 381 MEELSD--EDKATVMRARKIQKFLSQ 404


>gi|304407760|ref|ZP_07389411.1| ATP synthase F1, beta subunit [Paenibacillus curdlanolyticus YK9]
 gi|304343243|gb|EFM09086.1| ATP synthase F1, beta subunit [Paenibacillus curdlanolyticus YK9]
          Length = 468

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 164/302 (54%), Gaps = 11/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG PID + ++ +  ++  I  + P        ++  +TGI+VID+  P  
Sbjct: 90  ATLGRVFNVLGDPIDNNGAVDR-SIANPIHRQAPEFEELSTQQEMLETGIKVIDLMAPYA 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+  +     +   +   IS+   VGER RE  +   + + D+  +
Sbjct: 149 KGGKIGLFGGAGVGKTVTMQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSGVI 207

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 208 AKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDVEGRDVLLFVDNIFRFTQAGSEVSALL 267

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD
Sbjct: 268 GRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLD 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R++A  G +P VDPLAS SR L  +    +  ++  S+  ++ R++E  DI  I
Sbjct: 326 ATTNLERNIAAMGIFPAVDPLASSSRILTPEILGEEHYQVAQSVKKILQRYKELLDIIAI 385

Query: 393 GG 394
            G
Sbjct: 386 LG 387


>gi|206558440|ref|YP_002229200.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia J2315]
 gi|226740103|sp|B4EEY9|ATPB_BURCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|198034477|emb|CAR50342.1| ATP synthase beta chain [Burkholderia cenocepacia J2315]
          Length = 464

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D++  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-DSDVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|304398017|ref|ZP_07379892.1| ATP synthase F1, beta subunit [Pantoea sp. aB]
 gi|308188719|ref|YP_003932850.1| membrane-bound ATP synthase, F1 sector, beta- subunit [Pantoea
           vagans C9-1]
 gi|304354303|gb|EFM18675.1| ATP synthase F1, beta subunit [Pantoea sp. aB]
 gi|308059229|gb|ADO11401.1| membrane-bound ATP synthase, F1 sector, beta- subunit [Pantoea
           vagans C9-1]
          Length = 465

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMS---KVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID    L + D S +EI S     P   ++   ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLM 142

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 143 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDS 202

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 203 NVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E +DI 
Sbjct: 321 LDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|215434282|gb|ACJ66829.1| ATP synthase F1 beta subunit [uncultured bacterium pSY1435]
          Length = 463

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 10/293 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ LG+P+DG   L +G     ++    P   RQ     F TG++V+D+F PL  G 
Sbjct: 90  GRVIDMLGRPLDGGPVL-EGP-RWPLLRPAQPLAERQVARSIFTTGLKVVDLFAPLPRGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
             G+F G+G+GK+ L+     +         + + VGER RE RE ++E    + L  +V
Sbjct: 148 NTGLFGGAGVGKTVLMMELMHNTVHHHHGATVFAGVGERSREARELWLEMAESNVLPNAV 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           +V     E+P +R      A+TIAEYF  +   +VL+ +D++ RF  +  E++   G  P
Sbjct: 208 LVFGQMGETPGIRFRTAAAALTIAEYFRDEQRVDVLVFMDNVFRFVQAGNEVSGMLGRSP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++  E+  L ERI  +      IT+V +V V  D+  DP    +   LD  +V
Sbjct: 268 SRVGYQPTLAQEVAELEERI--ASTPHAAITSVQAVYVPADDITDPAVAEIFQHLDAFVV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP VDPLAS S  L  +       K+ S+   ++ ++EE RDI
Sbjct: 326 LSREAAAEGLYPAVDPLASSSTLLVAEIVGERHAKVASAARAVLAKYEELRDI 378


>gi|112791398|gb|ABI21969.1| ATP synthase beta subunit [Pantoea agglomerans]
          Length = 425

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 160/304 (52%), Gaps = 11/304 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMS---KVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID    L + D S +EI S     P   ++   ++  +TGI+VID+ 
Sbjct: 57  ATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLM 116

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 117 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDS 176

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 177 NVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 236

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 237 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 294

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E +DI 
Sbjct: 295 LDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 354

Query: 391 LIGG 394
            I G
Sbjct: 355 AILG 358


>gi|284049042|ref|YP_003399381.1| ATP synthase F1, beta subunit [Acidaminococcus fermentans DSM
           20731]
 gi|283953263|gb|ADB48066.1| ATP synthase F1, beta subunit [Acidaminococcus fermentans DSM
           20731]
          Length = 491

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 169/340 (49%), Gaps = 9/340 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLG 120
           V  I  D+V    +   + ++ G      G+    P    C GRV N LG+ +D D +  
Sbjct: 70  VQHIGHDVVRTVAMSSTDGLTRGMEALDTGKPITVPVGKGCLGRVFNVLGETVDDDPTPV 129

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I    P   ++    K  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 130 QASDYWPIHRPAPDLADQATETKIMETGIKVVDLIAPYSLGGKIGLFGGAGVGKTVLIME 189

Query: 181 FARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + S VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 190 LIHNVATNHGGYSVFSGVGERTREGNDLWGEMKESGVIDKTALVYGQMNEPPGARMRVGL 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF    G +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TGLTMAEYFRDVGGQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLANEMGALEE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPLA
Sbjct: 310 RI--TSTRSGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLSREIVELGIYPAVDPLA 367

Query: 356 SVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           S SR+ D     DE   V+  +  ++ R++E +DI  I G
Sbjct: 368 STSRILDPLVIGDEHYQVARGVQKILQRYKELQDIIAILG 407


>gi|112791394|gb|ABI21967.1| ATP synthase beta subunit [Pantoea ananatis]
          Length = 426

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 21/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150
              GR++N LG+PID      KGDL+ E  S V         P   ++   ++  +TGI+
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETGIK 112

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207
           VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  
Sbjct: 113 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 172

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  + 
Sbjct: 173 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 232

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   
Sbjct: 233 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 290

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E
Sbjct: 291 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 350

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 351 LKDIIAILG 359


>gi|195977927|ref|YP_002123171.1| F0F1 ATP synthase subunit beta [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868741|ref|YP_002744689.1| ATP synthase beta chain [Streptococcus equi subsp. zooepidemicus]
 gi|225870303|ref|YP_002746250.1| ATP synthase beta chain [Streptococcus equi subsp. equi 4047]
 gi|226740677|sp|B4U2E1|ATPB_STREM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808165|sp|C0M720|ATPB_STRE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585453|sp|C0MH17|ATPB_STRS7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|195974632|gb|ACG62158.1| ATP synthase beta chain AtpD [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699707|emb|CAW93438.1| ATP synthase beta chain [Streptococcus equi subsp. equi 4047]
 gi|225702017|emb|CAW99601.1| ATP synthase beta chain [Streptococcus equi subsp. zooepidemicus]
          Length = 468

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+ ID +      D++ E + K  PA +         +TGI+VID+  P   
Sbjct: 89  LGRVFNVLGETIDLEAPFAD-DVNREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
             L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|320539769|ref|ZP_08039430.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia
           symbiotica str. Tucson]
 gi|320030172|gb|EFW12190.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia
           symbiotica str. Tucson]
          Length = 460

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+G+    I    P        ++  +TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVLGEPIDMKGHIGEGE-RWAIHRPAPSYEELSSSQELLETGIKVMDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|242023574|ref|XP_002432207.1| ATP synthase subunit beta, putative [Pediculus humanus corporis]
 gi|212517604|gb|EEB19469.1| ATP synthase subunit beta, putative [Pediculus humanus corporis]
          Length = 550

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 17/314 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI   A   GR++N +G+PID    + K D    I ++ P  ++    ++   TGI+V+D
Sbjct: 156 RIPVGAETLGRIMNVIGEPIDERGPI-KTDKFAAIHAEAPEFVDMSVEQEILVTGIKVVD 214

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E 
Sbjct: 215 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 273

Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R
Sbjct: 274 IESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 333

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 334 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 391

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  ++
Sbjct: 392 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKIL 451

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 452 QDYKSLQDIIAILG 465


>gi|253574262|ref|ZP_04851604.1| ATP synthase F1, beta subunit [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846739|gb|EES74745.1| ATP synthase F1, beta subunit [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 463

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 167/306 (54%), Gaps = 17/306 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVE-KGFKTGIRVIDI 154
           +    RV N LG+PID      KG+ + E+   + + PP       + +  +TGI+VID+
Sbjct: 84  SATLSRVFNVLGEPIDN-----KGEANSELRYPIHREPPKFEDLSTQAEMLETGIKVIDL 138

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYL 210
             P   G +IG+F G+G+GK+  +     +   +   IS+   VGER RE  + ++E   
Sbjct: 139 LAPYAKGGKIGLFGGAGVGKTVTIQELIHNIAQEHGGISVFAGVGERTREGNDLYMEMTE 198

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
              ++K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 199 SGVIEKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDVLLFIDNIFRFTQAGSEV 258

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  
Sbjct: 259 SALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTF 316

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRD 388
           + LD    L R ++E+G +P VDPLAS SR+       +E   V+  +  ++ R++E +D
Sbjct: 317 AHLDATTNLERKISEKGIFPAVDPLASSSRILTPEIVGEEHYAVAQGVKQILARYKELQD 376

Query: 389 IRLIGG 394
           I  I G
Sbjct: 377 IIAILG 382


>gi|256823841|ref|YP_003147804.1| ATP synthase F1 subunit beta [Kangiella koreensis DSM 16069]
 gi|256797380|gb|ACV28036.1| ATP synthase F1, beta subunit [Kangiella koreensis DSM 16069]
          Length = 458

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G+ +  M I  K P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGEPIDQKGPIGEKE-RMSIHRKAPKLEELAPANELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLVIGSEHYDVARGVQGVLQRYKELKDIIAILG 377


>gi|114765102|ref|ZP_01444247.1| ATP synthase F1, beta subunit [Pelagibaca bermudensis HTCC2601]
 gi|114542506|gb|EAU45532.1| ATP synthase F1, beta subunit [Roseovarius sp. HTCC2601]
          Length = 463

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 162/307 (52%), Gaps = 12/307 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   +       GR+++  G+  D    L +      I +  PP   R    + F+TGI+
Sbjct: 70  GPLTVPVGGAVLGRLLDVTGRTGDRKGPLPEEAPRRAIHAAPPPLRARGGASEPFRTGIK 129

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205
           V+D+ TPL  G +  +F G+G+GK+ L+     SM A  D     + S +GER RE  E 
Sbjct: 130 VVDLLTPLAQGGKAAMFGGAGVGKTVLVMELIHSMVAGYDGIS--VFSGIGERSREGHEM 187

Query: 206 IEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
           + D      L ++V+V    +E P  R   P+TA+TIAE+F  ++  NVLL++D++ RF 
Sbjct: 188 LLDMTEAGVLDRTVLVYGQMNEPPGARWRVPMTALTIAEHFRDAEQKNVLLLMDNVFRFV 247

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP   GY  ++ +E+  L ERI  +   + ++TA+ +V V  D+  DP
Sbjct: 248 QAGSEVSGLLGRLPSRVGYQPTLATEVADLQERI--ASVGEASVTAIEAVYVPADDFTDP 305

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              ++   +D  +VL+R++A +G YP VDP+AS S L D     +E  ++ + +   I  
Sbjct: 306 AVVAIAGHVDSMVVLSRAMAADGMYPSVDPIASSSILLDPLLVGEEHVRIANEVRRSIEH 365

Query: 383 FEETRDI 389
           + E +D+
Sbjct: 366 YRELQDV 372


>gi|15674808|ref|NP_268982.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes M1 GAS]
 gi|71910394|ref|YP_281944.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS5005]
 gi|81856117|sp|Q9A0I7|ATPB_STRP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|13621938|gb|AAK33703.1| putative proton-translocating ATPase, beta subunit [Streptococcus
           pyogenes M1 GAS]
 gi|71853176|gb|AAZ51199.1| ATPase, beta subunit [Streptococcus pyogenes MGAS5005]
          Length = 468

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|21910035|ref|NP_664303.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS315]
 gi|28896267|ref|NP_802617.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes SSI-1]
 gi|71903225|ref|YP_280028.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS6180]
 gi|94988266|ref|YP_596367.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS9429]
 gi|94992140|ref|YP_600239.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS2096]
 gi|306827633|ref|ZP_07460913.1| ATP synthase F1 sector beta subunit [Streptococcus pyogenes ATCC
           10782]
 gi|81847483|sp|Q8K826|ATPB_STRP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573761|sp|Q1JCL3|ATPB_STRPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573762|sp|Q1JMI9|ATPB_STRPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573765|sp|Q48UD3|ATPB_STRPM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21904225|gb|AAM79106.1| putative proton-translocating ATPase beta subunit [Streptococcus
           pyogenes MGAS315]
 gi|28811518|dbj|BAC64450.1| putative proton-translocating ATPase, beta subunit [Streptococcus
           pyogenes SSI-1]
 gi|71802320|gb|AAX71673.1| ATPase, beta subunit [Streptococcus pyogenes MGAS6180]
 gi|94541774|gb|ABF31823.1| ATP synthase beta chain [Streptococcus pyogenes MGAS9429]
 gi|94545648|gb|ABF35695.1| ATP synthase beta chain [Streptococcus pyogenes MGAS2096]
 gi|304430196|gb|EFM33225.1| ATP synthase F1 sector beta subunit [Streptococcus pyogenes ATCC
           10782]
          Length = 468

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|292670131|ref|ZP_06603557.1| ATP synthase F1 sector subunit beta [Selenomonas noxia ATCC 43541]
 gi|292648230|gb|EFF66202.1| ATP synthase F1 sector subunit beta [Selenomonas noxia ATCC 43541]
          Length = 470

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+D + +      S  I    P   N++   +  +TGI+V+D+  P  
Sbjct: 87  ATLGRVFNVLGEPVDHNPAPVGNKESWPIHRPAPKFDNQETSTQILETGIKVVDLIAPYS 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +      + 
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVID 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KTALVYGQMNEPPGARMRVGLTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D      E  ++   +  ++ +++E +DI  I 
Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSTSRILDPLVIGQEHYEVARGVQAVLQKYKELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|291615580|ref|YP_003518322.1| AtpD [Pantoea ananatis LMG 20103]
 gi|291150610|gb|ADD75194.1| AtpD [Pantoea ananatis LMG 20103]
          Length = 473

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 21/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150
              GR++N LG+PID      KGDL+ E  S V         P   ++   ++  +TGI+
Sbjct: 91  ATLGRIMNVLGEPIDM-----KGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETGIK 145

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207
           VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  
Sbjct: 146 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 205

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  + 
Sbjct: 206 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   
Sbjct: 266 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E
Sbjct: 324 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LKDIIAILG 392


>gi|115345328|ref|NP_001041705.1| H+ transporting ATP synthase beta subunit isoform 2 [Bombyx mori]
 gi|95102940|gb|ABF51411.1| H+ transporting ATP synthase beta subunit isoform 2 [Bombyx mori]
          Length = 513

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  ++    ++   TGI+V+
Sbjct: 118 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 176

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 177 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 235

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 236 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 295

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 296 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 353

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 354 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 413

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 414 LQDYKSLQDIIAILG 428


>gi|312865035|ref|ZP_07725263.1| ATP synthase F1, beta subunit [Streptococcus downei F0415]
 gi|311099146|gb|EFQ57362.1| ATP synthase F1, beta subunit [Streptococcus downei F0415]
          Length = 468

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEEPFAQDAQREPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYGEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +  ++ + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQIGIYPAVDPLASSSRALAPEIVGEEHYQVATEVQRVLQRYNELQDIIAILG 385


>gi|148360282|ref|YP_001251489.1| ATP synthase F1 subunit beta [Legionella pneumophila str. Corby]
 gi|148282055|gb|ABQ56143.1| ATP synthase F1, beta chain [Legionella pneumophila str. Corby]
          Length = 474

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 10/313 (3%)

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V+  G   RI  S    GR++N  G+P+DG   L   +   ++++   P       E
Sbjct: 85  GLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETHEYR-DVLANFAPLEMTSTQE 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199
              +TGI+VID+  P   G + G+F G+G+GK+ LL   M A         + + VGER 
Sbjct: 144 TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 203

Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257
           RE  E   +      + K+++V    DESP +R    L+A+T AEY   + G  VL ++D
Sbjct: 204 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 263

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  EI+   G +P + GY  ++ +E+  L ER+  +   KG +T+V +V V  
Sbjct: 264 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 321

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376
           D+ +DP    + + LD  IVL+R+ A +G YP VDPLAS S+  DK    +    +  ++
Sbjct: 322 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 381

Query: 377 THLIHRFEETRDI 389
              + R++E  D+
Sbjct: 382 REHLERYQELEDM 394


>gi|327395850|dbj|BAK13272.1| ATP synthase beta chain AtpD [Pantoea ananatis AJ13355]
          Length = 465

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 21/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150
              GR++N LG+PID      KGDL+ E  S V         P   ++   ++  +TGI+
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETGIK 137

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207
           VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  
Sbjct: 138 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 197

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  + 
Sbjct: 198 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   
Sbjct: 258 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 315

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 375

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 376 LKDIIAILG 384


>gi|322411477|gb|EFY02385.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 468

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|218248404|ref|YP_002373775.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 8801]
 gi|257061470|ref|YP_003139358.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 8802]
 gi|226740186|sp|B7K2R8|ATPB_CYAP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218168882|gb|ACK67619.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 8801]
 gi|256591636|gb|ACV02523.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 8802]
          Length = 483

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 170/327 (51%), Gaps = 24/327 (7%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQR 140
           D+V       +       GR+ N LG+P+D      KGD+ M + S +    P  ++ + 
Sbjct: 80  DIVDTGAPISVPVGKVTLGRIFNVLGEPVDE-----KGDVDMSLTSPIHRPAPKLIDLET 134

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             K F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +   +   +S+   VGE
Sbjct: 135 KPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAINHGGVSVFAGVGE 194

Query: 198 RGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE      E IE  +   DN ++S   +V    +E P  R    L+ +T+AEYF    
Sbjct: 195 RTREGNDLYNEMIESKVINPDNPEESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVN 254

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT
Sbjct: 255 KQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSIT 312

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +       +
Sbjct: 313 SVQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGE 372

Query: 369 EK-KLVSSLTHLIHRFEETRDIRLIGG 394
           E      ++   + R++E +DI  I G
Sbjct: 373 EHYNTARAVQSTLQRYKELQDIIAILG 399


>gi|167821014|ref|ZP_02452694.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 91]
          Length = 426

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+++  G P  GDD      D+    + +  P +  Q+     F TGI+VID+  PL  
Sbjct: 12  GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 69

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E + D  G   L
Sbjct: 70  GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 127

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   
Sbjct: 128 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 187

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D
Sbjct: 188 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 245

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  + E +D+
Sbjct: 246 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 302


>gi|112791406|gb|ABI21973.1| ATP synthase beta subunit [Erwinia pyrifoliae DSM 12163]
          Length = 421

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   +   +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|46909259|gb|AAT06147.1| ATP synthase beta subunit [Modiolus americanus]
          Length = 427

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G PID    +   D  + I ++ P  +     ++  +TGI+V+
Sbjct: 55  IRIPVGPATLGRIINVVGDPIDERGPVNT-DKYLSIHAEAPDFVEMSVQQEVLETGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                   L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ S+  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRILDPYVVGEEHYAVARSIQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 351 LQNYKSLQDIIAILG 365


>gi|330723367|gb|AEC45737.1| F0F1 ATP synthase subunit beta [Mycoplasma hyorhinis MCLD]
          Length = 470

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 159/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LGK ID   +     L  EI S  P  ++++   +   TGI+VID+  P   G +
Sbjct: 96  RMFNVLGKVIDEKPAPVFEQLK-EIHSPAPSYVDQKASSEILVTGIKVIDLLIPFVKGGK 154

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+ +
Sbjct: 155 IGLFGGAGVGKTVLVQELINNVATQHGGLSVFAGVGERSREGNDLYFEMEAAGVLDKTAL 214

Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P 
Sbjct: 215 VFGQMNEPPGARMRVALSALTMAEYFRDQENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 274

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ +E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  S LD   VL
Sbjct: 275 TVGYQPTLATEMGQLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVL 332

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R++A  G YP VDPLAS SR+ D      E   V+  +   + RF+E +DI  I G
Sbjct: 333 DRNIASLGIYPAVDPLASGSRILDPLIVGQEHYNVARQVIQTLQRFKELQDIIAILG 389


>gi|251782142|ref|YP_002996444.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390771|dbj|BAH81230.1| ATP synthase beta chain [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 468

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|167850850|ref|ZP_02476358.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei B7210]
          Length = 418

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+++  G P  GDD      D+    + +  P +  Q+     F TGI+VID+  PL  
Sbjct: 4   GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 61

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E + D  G   L
Sbjct: 62  GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 119

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   
Sbjct: 120 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 179

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D
Sbjct: 180 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 237

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  + E +D+
Sbjct: 238 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 294


>gi|139474050|ref|YP_001128766.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes str.
           Manfredo]
 gi|166222419|sp|A2RFC2|ATPB_STRPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134272297|emb|CAM30551.1| ATP synthase beta chain [Streptococcus pyogenes str. Manfredo]
 gi|323126996|gb|ADX24293.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 468

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|114052072|ref|NP_001040450.1| H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori]
 gi|95102938|gb|ABF51410.1| H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori]
          Length = 516

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  ++    ++   TGI+V+
Sbjct: 121 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 179

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 239 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 416

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 417 LQDYKSLQDIIAILG 431


>gi|30248230|ref|NP_840300.1| F0F1 ATP synthase subunit beta [Nitrosomonas europaea ATCC 19718]
 gi|81838782|sp|Q82XP8|ATPB_NITEU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|30180115|emb|CAD84117.1| FoF1-type ATP synthase beta subunit [Nitrosomonas europaea ATCC
           19718]
          Length = 460

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G   L M I    P         +  +TGI+VID+  P   G
Sbjct: 84  LGRIMDVLGRPIDEMGEIGANSL-MPIHRAAPAFDELSASTELLETGIKVIDLVCPFAKG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 143 GKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 202

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 203 ALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 262

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 263 SAVGYQPTLAEEMGRLQERI--TSSKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVV 320

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      D       +   + R++E RDI  I G
Sbjct: 321 LSRDIASLGIYPAVDPLDSTSRQLDPLIIGEDHYNTAREVQQTLQRYKELRDIIAILG 378


>gi|255281451|ref|ZP_05346006.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
 gi|255267939|gb|EET61144.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
          Length = 466

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 167/323 (51%), Gaps = 10/323 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ ID  ++  KG+ +  I  K P    +    +  +TGI+VID+  P   G 
Sbjct: 86  GRMFNVLGEAIDEKET-PKGEETWCIHRKAPAFEKQSPAVEILETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +   +     I + VGER RE  + ++E      L K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGNDLYLEMKDSGVLDKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   K  +VLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEVPGARMRVAQTGLTMAEYFRDKKQQDVLLFIDNIYRFVQAGSEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +EL  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLANELGELQERI--TSTTDGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R + E+G YP VDPL S SR+ +     +E       +  L+ +++E +DI  I G  
Sbjct: 323 LSRKIVEQGIYPAVDPLESSSRILEAEIVGEEHYDTAMKVQQLLQKYQELQDIISILGMD 382

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
             +D     AV++   I  FL Q
Sbjct: 383 E-LDEEDKTAVYRARKIQKFLSQ 404


>gi|217422042|ref|ZP_03453545.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
 gi|217394273|gb|EEC34292.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
          Length = 538

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G  R+       GR+++  G P  GDD      D+    + +  P +  Q+     F TG
Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 165

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203
           I+VID+  PL  G +  +F G+G+GK+ L+     +M  R       + + +GER RE  
Sbjct: 166 IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 223

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           E + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ R
Sbjct: 224 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 283

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  
Sbjct: 284 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 341

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I
Sbjct: 342 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 401

Query: 381 HRFEETRDI 389
             + E +D+
Sbjct: 402 EHYRELQDV 410


>gi|325264571|ref|ZP_08131301.1| ATP synthase F1, beta subunit [Clostridium sp. D5]
 gi|324030233|gb|EGB91518.1| ATP synthase F1, beta subunit [Clostridium sp. D5]
          Length = 465

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+ ID  + +        ++ + PP+   Q  V +  +TGI+VID+  P   
Sbjct: 85  LGRLFNVLGETIDDGEPVNSD--KKWVIHRDPPSFEDQSPVIEVLETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      L+K
Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKASGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +    G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTRN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E  ++ + +T ++ +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESNSRILEADIVGEEHYEVANQVTAILQKYKELQDIIAILG 380


>gi|112791338|gb|ABI21939.1| ATP synthase beta subunit [Enterobacter cloacae subsp. dissolvens]
          Length = 421

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|332702727|ref|ZP_08422815.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay]
 gi|332552876|gb|EGJ49920.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay]
          Length = 467

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 161/299 (53%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR++N +G+P+D    +   D     + +  PA   Q  + +  +TGI+V+D+  P   G
Sbjct: 91  GRIMNVVGRPVDELGPVAAKDFWP--IHRPAPAFTEQSTKVEVLETGIKVVDLLIPFPKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ +L     +       K + + VGER RE  +   +      L K+
Sbjct: 149 GKMGLFGGAGVGKTVILMEMINNIAKQHGGKSVFAGVGERTREGNDLYHEMKDAGVLPKA 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            ++    +E P  R    LTA+T+AEYF    G++VLL +D+I RF  +  E++   G +
Sbjct: 209 ALIYGQMNEPPGARARVALTALTVAEYFRDVDGEDVLLFVDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  + LDG +
Sbjct: 269 PSAVGYQPTLGTDLGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDGTL 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D      +      ++  ++ ++++ +DI  I G
Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPNVLGVEHYGTARAVQQILQKYKDLQDIIAILG 385


>gi|112791372|gb|ABI21956.1| ATP synthase beta subunit [Brenneria nigrifluens]
          Length = 421

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ D    I  + P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGDIGEED-RWAIHREAPSYEELSSSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|188535583|ref|YP_001909380.1| F0F1 ATP synthase subunit beta [Erwinia tasmaniensis Et1/99]
 gi|226740200|sp|B2VCA4|ATPB_ERWT9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|188030625|emb|CAO98521.1| ATP synthase, F1 complex, beta subunit [Erwinia tasmaniensis
           Et1/99]
          Length = 460

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   +   +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|77964181|gb|ABB13426.1| ATP synthase subunit beta [Clostridium paradoxum]
          Length = 465

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 157/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG P+D    +      + I    P   +++   +  +TGI+V+D+  P   G
Sbjct: 88  LGRIFNVLGDPVDNKPEVEDAP-KLPIHRPAPSFEDQETATEILETGIKVVDLIAPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   + +    + K+
Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNIAKEHGGLSVFSGVGERTREGNDLYHEMIDSGVIDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 TLVYGQMNEPPGARMRVALTGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +A  G YP VDPL S SR+ D      E  ++   +  ++ R++E +DI  I G
Sbjct: 325 VLSRQIAALGIYPAVDPLDSTSRILDPNIVGREHYEVARGVQSVLQRYKELQDIIAILG 383


>gi|167748908|ref|ZP_02421035.1| hypothetical protein ANACAC_03682 [Anaerostipes caccae DSM 14662]
 gi|317472680|ref|ZP_07931995.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
 gi|167651530|gb|EDR95659.1| hypothetical protein ANACAC_03682 [Anaerostipes caccae DSM 14662]
 gi|316899857|gb|EFV21856.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
          Length = 466

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 172/325 (52%), Gaps = 12/325 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+ IDG + + +G+    ++ + PP    Q  V +  +TGI+VID+  P   
Sbjct: 85  LGRMFNVLGQNIDGKEQV-EGE-EQWVIHRDPPTFEEQSPVVEILETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L+     +   +     I + VGER RE  + + E      + K
Sbjct: 143 GGKVGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTEMNESGVIDK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF  +   NVLL +D+I R+  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAQTGLTMAEYFRDREHQNVLLFIDNIFRYVQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLANEVGELQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E   V+  +  L+ +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEAEVVGEEHYEVAMQVQELLQKYKELQDIISILG 380

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
               +D     AV++   I  FL Q
Sbjct: 381 MEE-LDEDDKLAVYRARKIQKFLSQ 404


>gi|310765896|gb|ADP10846.1| F0F1 ATP synthase subunit beta [Erwinia sp. Ejp617]
          Length = 435

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   +   +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|313112899|ref|ZP_07798545.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624804|gb|EFQ08113.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 464

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 159/305 (52%), Gaps = 10/305 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GRV N LG+P+D   +    +    I    P    +Q   +  +TGI+V+D+ 
Sbjct: 82  PVGDQCLGRVFNLLGEPVDNKPAPAP-EAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +    
Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++
Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A +G YP VDPL S SR L+ +    +  ++  ++  ++ R++E +DI
Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARAVQKVLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAIMG 383


>gi|289209746|ref|YP_003461812.1| ATP synthase F1 subunit beta [Thioalkalivibrio sp. K90mix]
 gi|288945377|gb|ADC73076.1| ATP synthase F1, beta subunit [Thioalkalivibrio sp. K90mix]
          Length = 458

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 160/302 (52%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157
            GRV++ LG+P+D       GD+  +    + +  P  + Q    +  +TGI+VID+  P
Sbjct: 82  LGRVMDVLGRPVDN-----AGDVEAQETWSIHRAAPTFDEQAGSTELLETGIKVIDLLCP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N 
Sbjct: 137 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNV 196

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE+F  +G +VL+ +D+I R+  +  E++   
Sbjct: 197 LDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALL 256

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD
Sbjct: 257 GRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLD 314

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VL+R +AE G YP VDPL S SR  D      E      ++ + + R++E +DI  I
Sbjct: 315 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPQIIGQEHYDTARAVQNTLQRYKELKDIIAI 374

Query: 393 GG 394
            G
Sbjct: 375 LG 376


>gi|112791340|gb|ABI21940.1| ATP synthase beta subunit [Enterobacter aerogenes]
          Length = 421

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|320409261|gb|ADW27221.1| ATP synthase beta subunit [Phoronis architecta]
          Length = 365

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 153/282 (54%), Gaps = 16/282 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    + K D+ + I  + P  ++    ++   TGI+V+
Sbjct: 22  IRIPVGPATLGRIINVIGEPIDERGPV-KADVYLPIHQEAPEFVDMSTDQEILVTGIKVV 80

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 81  DLLAPYAKGGKIGLFGGAGVGKTILIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 139

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 140 MIESGVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDYEGQDVLLFIDNIF 199

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 200 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 257

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD + VL+R +AE G YP VDPL S SR+ D
Sbjct: 258 TDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSSSRILD 299


>gi|269958748|ref|YP_003328535.1| F0F1 ATP synthase subunit beta [Anaplasma centrale str. Israel]
 gi|269848577|gb|ACZ49221.1| F0F1 ATP synthase subunit beta [Anaplasma centrale str. Israel]
          Length = 501

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 181/344 (52%), Gaps = 24/344 (6%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S GD   + G   ++P      GRV + LG+PIDG  S+   D+   
Sbjct: 81  VVRCVAMGSTDSLSRGDKFVNTGNQMLAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 139

Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182
            +    P+++ QRV  +   TGI+V+D+  P   G ++G+F G+G+GK+     L+S  A
Sbjct: 140 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 199

Query: 183 RSDCFDKVIISLVGERGRE----VREFIE------DYLGDNLKKSVVVVATSDESPILRK 232
           R+     V    VGER RE     RE +E      D  G +  ++V+V    +E P  R 
Sbjct: 200 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPGKS--QAVLVYGQMNEPPGARM 256

Query: 233 MAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF  S+G +VL  +D++ RF  S  E++   G +P A GY  ++ +E+ 
Sbjct: 257 RVALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLSAEMG 316

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            + ERI  +    G+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP V
Sbjct: 317 AMQERI--TSTNTGSITSVQAIYVPADDLTDPAPATSFAHLDSTTVLSRQISELGIYPAV 374

Query: 352 DPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           DPL S S+ L+ +   ++  ++   +  ++   +  +DI  I G
Sbjct: 375 DPLESTSQALSPEVVGSEHYEVAQEVKRILQTHKSLQDIIAILG 418


>gi|226326989|ref|ZP_03802507.1| hypothetical protein PROPEN_00849 [Proteus penneri ATCC 35198]
 gi|225204826|gb|EEG87180.1| hypothetical protein PROPEN_00849 [Proteus penneri ATCC 35198]
          Length = 460

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 169/336 (50%), Gaps = 17/336 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  + +S G  V   G    +       GR++N LG PID      KGD++ E
Sbjct: 51  IVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDM-----KGDIATE 105

Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  + P        ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R
Sbjct: 106 ERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 165

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +
Sbjct: 166 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 225

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 226 TMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 283

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 284 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 343

Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             D      E   V+  +  ++ R++E +DI  I G
Sbjct: 344 QLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|15966787|ref|NP_387140.1| F0F1 ATP synthase subunit beta [Sinorhizobium meliloti 1021]
 gi|307301615|ref|ZP_07581374.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti BL225C]
 gi|307316361|ref|ZP_07595805.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti AK83]
 gi|81633814|sp|Q92LK8|ATPB_RHIME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|15076059|emb|CAC47613.1| Probable ATP synthase beta chain [Sinorhizobium meliloti 1021]
 gi|306898201|gb|EFN28943.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti AK83]
 gi|306903313|gb|EFN33902.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti BL225C]
          Length = 504

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L K      I  + P  +++    +   TGI+V+D+  P   G
Sbjct: 117 LGRIMNVIGEPVDEAGPL-KTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKG 175

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     +
Sbjct: 176 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 234

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 235 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEQFRDEGQDVLFFVDNIFRFTQAGSEV 294

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 295 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 352

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   VS  +   + R++  +D
Sbjct: 353 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVSRKVQSTLQRYKALQD 412

Query: 389 IRLIGG 394
           I  I G
Sbjct: 413 IIAILG 418


>gi|127514770|ref|YP_001095967.1| F0F1 ATP synthase subunit beta [Shewanella loihica PV-4]
 gi|190358704|sp|A3QJR0|ATPB_SHELP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|126640065|gb|ABO25708.1| ATP synthase F1, beta subunit [Shewanella loihica PV-4]
          Length = 458

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 161/302 (53%), Gaps = 10/302 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           +   GR++N LG+P+D    +G+ D    I  + P   ++    +  +TGI+VID+  P 
Sbjct: 80  SATLGRIMNVLGQPVDEAGPIGE-DERYVIHREAPSYEDQSNTTELLETGIKVIDLVCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMEESGV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALL 257

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VL+R++A  G YP VDPL S SR  D      E   + S + +++ R++E +DI  I
Sbjct: 316 ATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVASGVQNVLQRYKELKDIIAI 375

Query: 393 GG 394
            G
Sbjct: 376 LG 377


>gi|167573813|ref|ZP_02366687.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis C6786]
          Length = 356

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 145/270 (53%), Gaps = 12/270 (4%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFA 182
           I    PP   ++     F TGI+VID+  PL  G +  +F G+G+GK+ L+     +M  
Sbjct: 3   IHRGAPPLSEQKSSTALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVE 62

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           R       + + +GER RE  E + D  G   L ++V+V    +E P  R   PLTA+ I
Sbjct: 63  RYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAI 120

Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF   +  NVLL++D++ RF  +  E++   G LP   GY  ++ SE+  L ERI  +
Sbjct: 121 AEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--A 178

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             E   +TA+ +V V  D+  DP   ++ + +D  +VL+R++A EG YP +DP+AS S L
Sbjct: 179 SVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSIL 238

Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            D     DE   V+  +  +I  + E +D+
Sbjct: 239 LDPLVVGDEHVEVAIEVRRVIEHYRELQDV 268


>gi|261341611|ref|ZP_05969469.1| hypothetical protein ENTCAN_08074 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315963|gb|EFC54901.1| ATP synthase F1, beta subunit [Enterobacter cancerogenus ATCC
           35316]
          Length = 460

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|325568952|ref|ZP_08145245.1| ATP synthase F1 sector beta subunit [Enterococcus casseliflavus
           ATCC 12755]
 gi|325157990|gb|EGC70146.1| ATP synthase F1 sector beta subunit [Enterococcus casseliflavus
           ATCC 12755]
          Length = 468

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFPEEAPRSGIHKKAPDFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYNEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +       ++ + + H + R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEKHYEVATEVQHALQRYRELQDIIAILG 385


>gi|168333944|ref|ZP_02692176.1| ATP synthase F1, beta subunit [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 468

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 12/299 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N  G P+D   +    D     + +  P+   Q       +TGI+V+D+  P   G
Sbjct: 94  GRIFNVTGDPVDNKPA---PDAEHWPIHRAAPSFEEQSTTAEILETGIKVVDLLCPYLKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + K+
Sbjct: 151 GKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLFHEMTDSGVINKT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 211 TMVFGQMNEPPGARMRVALTGLTMAEYFRDESGQDVLLFVDNIFRFIQAGSEVSALLGRI 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 271 PSAVGYQPTLATEVGTLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDAKT 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+ E+G YP VDPL S SR+ D +    D   +   +   + R++E +DI  I G
Sbjct: 329 VLSRSIVEQGIYPAVDPLDSTSRILDPQIVGQDHYDVSRQVQATLQRYKELQDIIAILG 387


>gi|259910316|ref|YP_002650672.1| F0F1 ATP synthase subunit beta [Erwinia pyrifoliae Ep1/96]
 gi|292490160|ref|YP_003533055.1| membrane-bound ATP synthase, F1 sector subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292901162|ref|YP_003540531.1| ATP synthase subunit beta [Erwinia amylovora ATCC 49946]
 gi|224965938|emb|CAX57471.1| ATP synthase, F1 complex, beta subunit [Erwinia pyrifoliae Ep1/96]
 gi|283480439|emb|CAY76355.1| membrane-bound ATP synthase, F1 sector,beta-subunit [Erwinia
           pyrifoliae DSM 12163]
 gi|291201010|emb|CBJ48149.1| ATP synthase beta subunit [Erwinia amylovora ATCC 49946]
 gi|291555602|emb|CBA24220.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
           amylovora CFBP1430]
 gi|312174353|emb|CBX82606.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
           amylovora ATCC BAA-2158]
          Length = 460

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   +   +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|39933253|ref|NP_945529.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris CGA009]
 gi|192288604|ref|YP_001989209.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris TIE-1]
 gi|81829803|sp|Q6NDD2|ATPB_RHOPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|39652878|emb|CAE25620.1| putative H+-transporting ATP synthase beta chain [Rhodopseudomonas
           palustris CGA009]
 gi|192282353|gb|ACE98733.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris TIE-1]
          Length = 476

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 17/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR++N +G+P+D    + K +    I  + P   ++    +   TGI+V+D+  P 
Sbjct: 86  AGTLGRIMNVIGEPVDEQGPI-KSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+       AR+     V    VGER RE      EFIE  +
Sbjct: 145 AKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAG-VGERTREGNDLYHEFIESGV 203

Query: 211 ----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
               G    K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  + 
Sbjct: 204 NKKGGGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAG 263

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   
Sbjct: 264 SEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPA 321

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEE 385
           +  + LD   VLNR+++E+G YP VDPL S SR+   +   +E    + +   ++ +++ 
Sbjct: 322 TSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSASIVGEEHYNTARMVQQILQKYKS 381

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 382 LQDIIAILG 390


>gi|28572498|ref|NP_789278.1| F0F1 ATP synthase subunit beta [Tropheryma whipplei TW08/27]
 gi|81629884|sp|Q83HY0|ATPB_TROW8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573776|sp|Q83G91|ATPB_TROWT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|29422126|gb|AAO84483.1|AF483648_2 ATP synthase F1 complex beta chain [Tropheryma whipplei]
 gi|28410630|emb|CAD67016.1| ATP synthase beta chain [Tropheryma whipplei TW08/27]
          Length = 474

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N +G+ ++ +    K D    I  K P     +   + F+TGI+VID+ TP   G 
Sbjct: 93  GRVFNVVGEVLNSNGEDIKFDEYWSIHRKPPEFSLLESKTQLFETGIKVIDLLTPYVQGG 152

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I +        K+ 
Sbjct: 153 KIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIREMQDAGVFDKTA 212

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 213 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRIP 272

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 273 SAVGYQPNLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAHLDATTE 330

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP VDPLAS SR+ D  +   D  ++  ++  ++ R +E R+I  I G
Sbjct: 331 LSREIASKGLYPAVDPLASTSRILDPKYIGKDHYRVAVTVKQILQRDKELREIIAILG 388


>gi|42520100|ref|NP_966015.1| F0F1 ATP synthase subunit beta [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|81700105|sp|Q73IG3|ATPB_WOLPM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|42409837|gb|AAS13949.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 475

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 28/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   
Sbjct: 86  LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 144

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
           G +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+ 
Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 202

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266
                   ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  + 
Sbjct: 203 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 262

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   
Sbjct: 263 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 320

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  S LD   VL+R +AE G YP VDPL S S+ L+ +    +   + S +  ++  ++ 
Sbjct: 321 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKS 380

Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419
            +DI  I G     D   +I+D+A      I  FL Q
Sbjct: 381 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413


>gi|167829375|ref|ZP_02460846.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 9]
          Length = 421

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+++  G P  GDD      D+    + +  P +  Q+     F TGI+VID+  PL  
Sbjct: 7   GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 64

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           G +  +F G+G+GK+ L+     +M  R       + + +GER RE  E + D  G   L
Sbjct: 65  GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 122

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   
Sbjct: 123 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 182

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D
Sbjct: 183 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 240

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
             +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I  + E +D+
Sbjct: 241 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 297


>gi|331695534|ref|YP_004331773.1| ATP synthase subunit beta [Pseudonocardia dioxanivorans CB1190]
 gi|326950223|gb|AEA23920.1| ATP synthase subunit beta [Pseudonocardia dioxanivorans CB1190]
          Length = 475

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG+ +D  D    G+L   I  K P     +   +  +TGI+VID+ TP   G 
Sbjct: 98  GHVFNALGECLDKPDLEITGEL-WGIHRKAPSFDQLEGRTEMLETGIKVIDLLTPYVQGG 156

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +      +  + 
Sbjct: 157 KIGLFGGAGVGKTVLIQEMITRVAKNFGGTSVFAGVGERTREGNDLITEMTESGVIADTA 216

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 217 LVFGQMDEPPGTRMRVALSALTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 276

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 277 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 334

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++++G YP VDPL S SR+ D  +  DE  ++ + +  ++ R+ + +DI  I G
Sbjct: 335 LSRPISQKGIYPAVDPLTSTSRILDPQYIGDEHFRVANEVKRILQRYSDLQDIIAILG 392


>gi|312794895|ref|YP_004027817.1| ATP synthase beta chain [Burkholderia rhizoxinica HKI 454]
 gi|312166670|emb|CBW73673.1| ATP synthase beta chain (EC 3.6.3.14) [Burkholderia rhizoxinica HKI
           454]
          Length = 463

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPISHEN-TRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   ++ S+   + RF+E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRSVQQTLQRFKELRDIIAILG 382


>gi|257873785|ref|ZP_05653438.1| ATP synthase F1 [Enterococcus casseliflavus EC10]
 gi|257877535|ref|ZP_05657188.1| ATP synthase F1 [Enterococcus casseliflavus EC20]
 gi|257807949|gb|EEV36771.1| ATP synthase F1 [Enterococcus casseliflavus EC10]
 gi|257811701|gb|EEV40521.1| ATP synthase F1 [Enterococcus casseliflavus EC20]
          Length = 468

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFPEEAPRSGIHKKAPDFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYNEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +       ++ + + H + R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEKHYEVATEVQHALQRYRELQDIIAILG 385


>gi|296105474|ref|YP_003615620.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059933|gb|ADF64671.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 460

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|329296425|ref|ZP_08253761.1| F0F1 ATP synthase subunit beta [Plautia stali symbiont]
          Length = 465

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 158/309 (51%), Gaps = 21/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME---------IMSKVPPAMNRQRVEKGFKTGIR 150
              GR++N LG+PID      KGDL  E         I    P   ++   ++  +TGI+
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDLKEEDGSAVEVSSIHRAAPSYEDQSNSQELLETGIK 137

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207
           VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  
Sbjct: 138 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 197

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  + 
Sbjct: 198 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   
Sbjct: 258 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 315

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E
Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQE 375

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 376 LKDIIAILG 384


>gi|258690476|gb|ACV88000.1| ATP synthase beta subunit [Tethya actinia]
          Length = 395

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 161/307 (52%), Gaps = 21/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +G  ++   I +  P  +     ++   TGI+V+D+  P   G 
Sbjct: 64  GRIINVIGEPIDERGPMGT-NMEASIHADAPEFVEMNVKQEILVTGIKVVDLLAPYAKGG 122

Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209
           +IG+F G+G+GK+ ++         A   C    + + VGER RE  +   +        
Sbjct: 123 KIGLFGGAGVGKTVVIMELINNVAKAHGGCS---VFAGVGERTREGNDLYHEMIQSGVIS 179

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 180 LKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSE 239

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 240 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAVFVPADDLTDPAPATT 297

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD   VL+R+++E G YP VDPL S SR+ D     +E   V+  +  ++  ++  +
Sbjct: 298 FAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNIVGEEHYNVARGVQKILQDYKSLQ 357

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 358 DIIAILG 364


>gi|316931855|ref|YP_004106837.1| ATP synthase F1 subunit beta [Rhodopseudomonas palustris DX-1]
 gi|315599569|gb|ADU42104.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris DX-1]
          Length = 476

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 160/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    + K +    I  + P   ++    +   TGI+V+D+  P   G 
Sbjct: 90  GRIMNVIGEPVDEQGPI-KSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL---- 210
           +IG+F G+G+GK+ L+       AR+     V    VGER RE      EFIE  +    
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAG-VGERTREGNDLYHEFIESGVNKKG 207

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G    K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++
Sbjct: 208 GGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVS 267

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  +
Sbjct: 268 ALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSFA 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDI 389
            LD   VLNR+++E+G YP VDPL S SR+   +   +E    + +   ++ +++  +DI
Sbjct: 326 HLDATTVLNRAISEKGIYPAVDPLDSTSRMLSASIVGEEHYTTARMVQQILQKYKSLQDI 385

Query: 390 RLIGG 394
             I G
Sbjct: 386 IAILG 390


>gi|34500022|gb|AAQ73593.1| ATP synthase beta subunit [Lonepinella koalarum]
          Length = 426

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  + +  I  + P   ++    +  +TGI+VID+  P   G
Sbjct: 76  LGRIMNVLGEPIDEKGEIG-AEENWAIHRQAPSYEDQSNSTELLETGIKVIDLICPFAKG 134

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 135 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 194

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 195 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 254

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 255 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 312

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +  ++ R++E +DI  I G
Sbjct: 313 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGILQRYKELKDIIAILG 370


>gi|28493391|ref|NP_787552.1| F0F1 ATP synthase subunit beta [Tropheryma whipplei str. Twist]
 gi|28476432|gb|AAO44521.1| ATP synthase beta chain [Tropheryma whipplei str. Twist]
          Length = 477

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N +G+ ++ +    K D    I  K P     +   + F+TGI+VID+ TP   G 
Sbjct: 96  GRVFNVVGEVLNSNGEDIKFDEYWSIHRKPPEFSLLESKTQLFETGIKVIDLLTPYVQGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I +        K+ 
Sbjct: 156 KIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIREMQDAGVFDKTA 215

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 216 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRIP 275

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 276 SAVGYQPNLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAHLDATTE 333

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP VDPLAS SR+ D  +   D  ++  ++  ++ R +E R+I  I G
Sbjct: 334 LSREIASKGLYPAVDPLASTSRILDPKYIGKDHYRVAVTVKQILQRDKELREIIAILG 391


>gi|112791404|gb|ABI21972.1| ATP synthase beta subunit [Erwinia amylovora]
          Length = 421

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   ++   +   +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEPSGFSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|121534927|ref|ZP_01666746.1| ATP synthase F1, beta subunit [Thermosinus carboxydivorans Nor1]
 gi|121306526|gb|EAX47449.1| ATP synthase F1, beta subunit [Thermosinus carboxydivorans Nor1]
          Length = 469

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ +D DD     +    I    P    ++      +TGI+V+D+  P   G
Sbjct: 89  LGRVFNVLGETVDNDDREVIAEDYWPIHRPAPSFEEQETSTTILETGIKVVDLIAPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  + ++E      + K+
Sbjct: 149 GKIGLFGGAGVGKTVLIMELIRNIATEHGGFSVFAGVGERTREGNDLWMEMRESGVIDKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF    G +VLL +D+I RF  +  E++   G +
Sbjct: 209 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVHGQDVLLFIDNIFRFIQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 269 PSAVGYQPTLGTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D      E  ++   +  ++ R++E +DI  I G
Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPNIIGQEHYEVARGVQEVLQRYKELQDIIAILG 385


>gi|295095359|emb|CBK84449.1| ATP synthase F1 subcomplex beta subunit [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 460

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|126665446|ref|ZP_01736428.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
 gi|126630074|gb|EBA00690.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
          Length = 479

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 161/295 (54%), Gaps = 13/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N  G+PID   +    D+   I  + PPA+  + V     +TGI+ ID+ +P+  G
Sbjct: 107 GRMLNVFGEPIDNKPAPAT-DIRRSI-HQPPPALEDRVVHSDILETGIKAIDLLSPIERG 164

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKK 216
            + G+F G+G+GK+ L++    +   +   +SL   +GER RE  E   + +GD     K
Sbjct: 165 GKTGLFGGAGVGKTVLITELINNTVQEYEGVSLFCGIGERSREAEELYRE-MGDAGVRDK 223

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E+P +R +   TA+T+AEYF   K  +VLL++D+I RF  +  E++   G 
Sbjct: 224 TVMVFGQMNEAPGVRFLVGKTALTMAEYFRDDKKQDVLLLIDNIFRFVQAGSEVSGLMGR 283

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ +EL  L ERI  +    G+IT++ +V V  D+  DP A  + S L   
Sbjct: 284 MPSRVGYQPTLATELATLEERI--TSTRNGSITSIQAVYVPADDFTDPAAAHIFSHLSAS 341

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           +VL+R  A EG YP VDPLAS S +   A        +  ++   +  +E+ RDI
Sbjct: 342 VVLSRKRASEGLYPAVDPLASASVMLTPAVVGQRHYDIARAVRRTLADYEDLRDI 396


>gi|307195440|gb|EFN77326.1| ATP synthase subunit beta, mitochondrial [Harpegnathos saltator]
          Length = 518

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 155/292 (53%), Gaps = 17/292 (5%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  VF  G   RI   A   GR+IN +G+PID    +    L+  I +  P  ++    +
Sbjct: 115 GQNVFDSGYPIRIPVGAETLGRIINVIGEPIDERGPIATDKLAA-IHADAPEFVDMSVEQ 173

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198
           +   TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER
Sbjct: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGER 232

Query: 199 GRE----VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGD 250
            RE      E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G 
Sbjct: 233 TREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 293 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D
Sbjct: 351 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 402


>gi|296327996|ref|ZP_06870531.1| ATP synthase F1 sector beta subunit [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154952|gb|EFG95734.1| ATP synthase F1 sector beta subunit [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 462

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    L   +  + I  + P   + +   + F+TGI+VID+  P  
Sbjct: 82  AVLGRILNVLGEPVDNQGPL-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE R+   +      + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   G
Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD 
Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R++A  G YP VDPL S S+ L++     +  ++   +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|299821861|ref|ZP_07053749.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Listeria
           grayi DSM 20601]
 gi|299817526|gb|EFI84762.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Listeria
           grayi DSM 20601]
          Length = 473

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+ ID D+ +   D+    + +  P  +    +    +TGI+V+D+  P   
Sbjct: 92  LGRVFNVLGETIDLDEPIA-ADIQRNKIHRPAPTFDELATKTEILETGIKVVDLLAPYVK 150

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K
Sbjct: 151 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEK 210

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G 
Sbjct: 211 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGR 270

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD  
Sbjct: 271 MPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 328

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E+G YP VDPLAS SR L+ +    +   + + +  L+ R+ E +DI  I G
Sbjct: 329 TNLERKLTEQGIYPAVDPLASTSRALSPEIVGEEHYNIATGVQRLLQRYRELQDIIAILG 388


>gi|291286803|ref|YP_003503619.1| ATP synthase F1, beta subunit [Denitrovibrio acetiphilus DSM 12809]
 gi|290883963|gb|ADD67663.1| ATP synthase F1, beta subunit [Denitrovibrio acetiphilus DSM 12809]
          Length = 467

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN  G P+D    L + +    I    P   ++    +  +TGI+VID+  P   G
Sbjct: 87  LGRIINVTGDPVDEAGPL-ETETRWPIHRPAPTLEDQDTGTEILETGIKVIDLLEPYTKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +   +     + + VGER RE ++ +E+      + K 
Sbjct: 146 GKTGLFGGAGVGKTVLIMELINNIAQEHGGYSVFAGVGERTREGKDLLEEMEESGVISKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF+ +  E++   G +
Sbjct: 206 ALVYGQMNEPPGARMRVALTGLTVAEYFRDEEGQDVLLFVDNIFRFSQAGSEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + +D   
Sbjct: 266 PSAVGYQPTLGTEMGELQERI--TSTSKGSITSVQAVYVPADDLTDPAPATTFAHIDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     +E   V+  +  ++ +++E +DI  I G
Sbjct: 324 VLSRQIAELGIYPAVDPLDSTSRILDPGVVGEEHYAVARGVQAVLQKYKELQDIIAILG 382


>gi|34500008|gb|AAQ73586.1| ATP synthase beta subunit [Actinobacillus succinogenes]
          Length = 439

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G  + +  I  + P   ++    +  +TGI+VID+  P   G 
Sbjct: 78  GRIMNVLGEPIDQKGEIG-AEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGG 136

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K  
Sbjct: 137 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLDKVS 196

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 197 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 257 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           +R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI
Sbjct: 315 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDI 366


>gi|323352614|ref|ZP_08087584.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis VMC66]
 gi|322121650|gb|EFX93396.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis VMC66]
 gi|325690056|gb|EGD32060.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK115]
 gi|325693989|gb|EGD35907.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK150]
 gi|325696691|gb|EGD38579.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK160]
 gi|327458645|gb|EGF04993.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1057]
 gi|327468900|gb|EGF14372.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK330]
 gi|332361632|gb|EGJ39436.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1056]
 gi|332362656|gb|EGJ40454.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK49]
 gi|332363078|gb|EGJ40865.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK355]
 gi|332365946|gb|EGJ43702.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1059]
          Length = 468

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|146329438|ref|YP_001210026.1| F0F1 ATP synthase subunit beta [Dichelobacter nodosus VCS1703A]
 gi|166201700|sp|A5EXL4|ATPB_DICNV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146232908|gb|ABQ13886.1| ATP synthase F1, beta subunit [Dichelobacter nodosus VCS1703A]
          Length = 463

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D   ++   D    I    P         +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMNVLGEPVDHGGAINAED-KWSIHRAAPAYDELSNSTELLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFI-EDYLGDNLK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  E    D L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYYEMKESDVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E    R    LT +T+AEYF  +G +VL  +D+I R+  +  E++   G 
Sbjct: 200 KVSLVYGQMNEPAGNRFRVALTGLTMAEYFREEGRDVLFFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGKLQERIAST--KKGSITSIQAVYVPADDLTDPSPATTFAHLDST 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +AE G YP VDPL S SR  D     +E       +  ++ R++E RDI  I G
Sbjct: 318 VVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGEEHYSTARRVQGVLQRYKELRDIIAILG 377


>gi|225376567|ref|ZP_03753788.1| hypothetical protein ROSEINA2194_02209 [Roseburia inulinivorans DSM
           16841]
 gi|225211604|gb|EEG93958.1| hypothetical protein ROSEINA2194_02209 [Roseburia inulinivorans DSM
           16841]
          Length = 467

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 162/308 (52%), Gaps = 11/308 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVI 152
           ++   A   GR+ N LG  +DG ++L   +    ++ + PP+   Q  V +  +TGI+VI
Sbjct: 77  KVPVGAKTLGRLFNVLGDTLDGGENLDAEE--HWVIHRDPPSFEDQSPVVEILETGIKVI 134

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   + 
Sbjct: 135 DLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEM 194

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                L+K+ +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  
Sbjct: 195 KESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGS 254

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +
Sbjct: 255 EVSALLGRMPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPAT 312

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R + E+G YP VDPL S SR L +     +  +    +  ++ ++ E 
Sbjct: 313 TFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETARKVQEILQKYTEL 372

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 373 QDIIAILG 380


>gi|192359136|ref|YP_001984260.1| F0F1 ATP synthase subunit beta [Cellvibrio japonicus Ueda107]
 gi|226740176|sp|B3PIS7|ATPB_CELJU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190685301|gb|ACE82979.1| ATP synthase F1, beta subunit [Cellvibrio japonicus Ueda107]
          Length = 459

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 160/299 (53%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +  M+I    P        E+  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEAGPIGEQE-RMQIHRAAPAYEELAASEELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N+  K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYHEMKDSNVVDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 261 PSAVGYQPTLAEEMGVLQERI--TSTKIGSITSVQAVYVPADDLTDPSPATTFAHLDSTV 318

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +A +G YP +DPL S SR  D     +E  LV+  +  ++ R++E +DI  I G
Sbjct: 319 VLSRDIAAKGIYPAIDPLDSTSRQLDPMVIGNEHYLVARGVQSVLQRYKELKDIIAILG 377


>gi|18146851|dbj|BAB82484.1| F0F1-ATPase subunit beta [Colwellia maris]
          Length = 461

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ D    I  + P    +    +  +TGI+VID+  P   G
Sbjct: 86  LGRIMNVLGEPIDEAGPIGEKD-RWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R     T +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 205 SLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +   KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGILQERI--TSTNKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP +DPL S SR  D     A+  +    +  ++ R++E +DI  I G
Sbjct: 323 LSRDIASQGIYPAIDPLDSSSRQLDPLVVGAEHYETARGVQTVLQRYKELKDIIAILG 380


>gi|152978010|ref|YP_001343639.1| F0F1 ATP synthase subunit beta [Actinobacillus succinogenes 130Z]
 gi|171472936|sp|A6VL57|ATPB_ACTSZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150839733|gb|ABR73704.1| ATP synthase F1, beta subunit [Actinobacillus succinogenes 130Z]
          Length = 458

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G  + +  I  + P   ++    +  +TGI+VID+  P   G 
Sbjct: 84  GRIMNVLGEPIDQKGEIG-AEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K  
Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLDKVS 202

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 320

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           +R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI
Sbjct: 321 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDI 372


>gi|158321580|ref|YP_001514087.1| F0F1 ATP synthase subunit beta [Alkaliphilus oremlandii OhILAs]
 gi|172048246|sp|A8MJV9|ATPB_ALKOO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158141779|gb|ABW20091.1| ATP synthase F1, beta subunit [Alkaliphilus oremlandii OhILAs]
          Length = 464

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N +G+P+D   ++   +    I    P   ++    +  +TGI+V+D+  P  
Sbjct: 86  ATLGRIFNVIGEPVDEKGAVA-AEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAPYL 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   + +    + 
Sbjct: 145 KGGKIGLFGGAGVGKTVLIMELINNIAKEHGGLSVFSGVGERTREGNDLYNEMIESGVID 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AE+F   +G +VLL +D+I RF  +  E++   G
Sbjct: 205 KTALVYGQMNEPPGARMRVGLTGLTMAEHFRDEEGQDVLLFIDNIFRFTQAGSEVSALLG 264

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 265 RMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDA 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+R + E G YP VDPL S SR+ D A   DE   V+  +  ++ R++E +DI  I 
Sbjct: 323 TTVLSRQIVELGIYPAVDPLDSNSRVLDPAIVGDEHYSVARGVQEVLQRYKELQDIIAIL 382

Query: 394 G 394
           G
Sbjct: 383 G 383


>gi|19703700|ref|NP_603262.1| F0F1 ATP synthase subunit beta [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|81848278|sp|Q8RGE2|ATPB_FUSNN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|19713824|gb|AAL94561.1| ATP synthase beta chain, sodium ion specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 462

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    L   +  + I  + P   + +   + F+TGI+VID+  P  
Sbjct: 82  AVLGRILNVLGEPVDNQGPL-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE R+   +      + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   G
Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD 
Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R++A  G YP VDPL S S+ L++     +  ++   +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|226371|prf||1508208B ATPase beta
          Length = 460

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+  P
Sbjct: 85  LGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N 
Sbjct: 140 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNV 199

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   
Sbjct: 200 LDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALL 259

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 260 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 317

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI  I
Sbjct: 318 ATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAI 377

Query: 393 GG 394
            G
Sbjct: 378 LG 379


>gi|115350153|ref|YP_771992.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria AMMD]
 gi|122324407|sp|Q0BJL5|ATPB_BURCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115280141|gb|ABI85658.1| ATP synthase F1 subcomplex beta subunit [Burkholderia ambifaria
           AMMD]
          Length = 464

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +++  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESEVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|258652337|ref|YP_003201493.1| ATP synthase F1 subunit beta [Nakamurella multipartita DSM 44233]
 gi|258555562|gb|ACV78504.1| ATP synthase F1, beta subunit [Nakamurella multipartita DSM 44233]
          Length = 472

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG+ +D   + G G D     + + PPA ++ +   +   TGI+VID+ TP   
Sbjct: 97  GHVFNALGRCLD---APGTGEDAEHWPIYRKPPAFDQLEGRTQQLVTGIKVIDLLTPYVQ 153

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F E      +  
Sbjct: 154 GGKIGLFGGAGVGKTVLIQEMITRVAKNFGGTSVFAGVGERTREGNDLFTEMTESGVIND 213

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 214 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 273

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 274 MPSAVGYQPTLADEMGELQERITSTKGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 331

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+R++ E+G YP V+PL+S SR+ D  +  DE  ++   +  ++ +++E +DI  I G
Sbjct: 332 TELDRAITEKGIYPAVNPLSSTSRILDPQFVGDEHYRVAQEVIRILQKYKELQDIIAILG 391


>gi|328768905|gb|EGF78950.1| hypothetical protein BATDEDRAFT_20257 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 507

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 171/327 (52%), Gaps = 17/327 (5%)

Query: 81  ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G     P    C GR++N +G+P+D    +    L + I +  P  +++ 
Sbjct: 99  LTRGQKVLDTGAPICIPVGPECLGRIMNVIGEPVDERGPIKTKQL-LPIHASPPEFVDQS 157

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLV 195
            V +  +TGI+V+D+  P   G +IG+F G+G+GK+ L++      A++     V    V
Sbjct: 158 TVPELLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLITELINNVAKAHGGYSVFCG-V 216

Query: 196 GERGREVREFIEDYLGDNL------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSK 248
           GER RE  +   + +   +       K+ +V    +E P  R    LT +TIAEYF   +
Sbjct: 217 GERTREGNDLYHEMITAGVIKLEGGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDQE 276

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  +KG+IT
Sbjct: 277 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTKKGSIT 334

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D     D
Sbjct: 335 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRILDPRIVGD 394

Query: 369 EK-KLVSSLTHLIHRFEETRDIRLIGG 394
               + + +  ++  ++  +DI  I G
Sbjct: 395 HHYGIATGVQKILQNYKSLQDIIAILG 421


>gi|302692110|ref|XP_003035734.1| hypothetical protein SCHCODRAFT_65406 [Schizophyllum commune H4-8]
 gi|300109430|gb|EFJ00832.1| hypothetical protein SCHCODRAFT_65406 [Schizophyllum commune H4-8]
          Length = 538

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 164/308 (53%), Gaps = 18/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + KGD  + I +  P  +++    +  +TGI+V+D+  P  
Sbjct: 149 ATLGRIMNVIGEPIDERGPI-KGDKLLPIHADPPAFVDQSTTAEVLETGIKVVDLLAPYA 207

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE----D 208
            G +IG+F G+G+GK+ L+     +        S+   VGER RE      E IE    +
Sbjct: 208 RGGKIGLFGGAGVGKTVLIQELINNVAKAHGGFSIFCGVGERTREGNDLYHEMIETGVIN 267

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  
Sbjct: 268 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGS 325

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 326 EVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPAT 383

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +AE G YP VDPL S SR+ D      E   + +++  ++  ++  
Sbjct: 384 TFAHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPRIVGQEHYAIATAVQKILQDYKSL 443

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 444 QDIIAILG 451


>gi|94501602|ref|ZP_01308119.1| ATP synthase F1, beta subunit [Oceanobacter sp. RED65]
 gi|94426285|gb|EAT11276.1| ATP synthase F1, beta subunit [Oceanobacter sp. RED65]
          Length = 458

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ + +  I  K P    +   ++  +TG++VID+  P   G
Sbjct: 83  LGRIMDVLGDPIDEKGPIGEQERA-SIHRKAPSYDEQAGGQELLETGVKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSESNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP +DPL S SR  D      E   +   +  ++ RF+E +DI  I G
Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKDIIAILG 377


>gi|326693459|ref|ZP_08230464.1| F0F1 ATP synthase subunit beta [Leuconostoc argentinum KCTC 3773]
          Length = 466

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+P+D +  +        I    P         +  +TGI+VID+  P  
Sbjct: 85  ATLGRVFNVLGEPVDNNGPVAPDTPRHSIHRAAPKYDELASSTEILETGIKVIDLLAPYI 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      L 
Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAESGVLS 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AE F  ++G +VLL +D+I RF  +  E++   G
Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAESFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
              L RSL ++G YP VDPLAS S   D      E  ++ + +   + R+ E +DI
Sbjct: 323 TTNLERSLTQQGIYPAVDPLASTSSALDPQVVGQEHYEVATEVQRTLQRYRELQDI 378


>gi|182435956|ref|YP_001823675.1| F0F1 ATP synthase subunit beta [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776580|ref|ZP_08235845.1| ATP synthase subunit beta [Streptomyces cf. griseus XylebKG-1]
 gi|226740678|sp|B1W0A3|ATPB_STRGG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|178464472|dbj|BAG18992.1| putative ATP synthase beta chain [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326656913|gb|EGE41759.1| ATP synthase subunit beta [Streptomyces cf. griseus XylebKG-1]
          Length = 480

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 164/298 (55%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 101 GKVFNTLGQILNEPEAEAQITERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R +   D V + + VGER RE  + I++      L+K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTESGVLEKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++E+G YP VDPL S SR+ D  + S D     S +  ++ ++++ +DI  I G
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYAAASRVKGILQKYKDLQDIIAILG 396


>gi|148975564|ref|ZP_01812435.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
 gi|145964992|gb|EDK30243.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
          Length = 461

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+ + + EI  + P    +    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGQPIDECGEIGQKE-NYEIHREAPSYEEKANSTELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   +  ++   + R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLIVGQEHYDIAQTVQTTLQRYKELKDIIAILG 380


>gi|146309620|ref|YP_001190085.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina ymp]
 gi|166990373|sp|A4Y187|ATPB_PSEMY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145577821|gb|ABP87353.1| ATP synthase F1, beta subunit [Pseudomonas mendocina ymp]
          Length = 458

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +   EI    P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEAGPIGE-EEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E  +    + +++ R++E +DI  I G
Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYETARGVQYVLQRYKELKDIIAILG 377


>gi|284992516|ref|YP_003411070.1| ATP synthase F1 subunit beta [Geodermatophilus obscurus DSM 43160]
 gi|284065761|gb|ADB76699.1| ATP synthase F1, beta subunit [Geodermatophilus obscurus DSM 43160]
          Length = 478

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 162/303 (53%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPID----GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            G V NALG+ +D    G+D+L  G     I    P     +   +  +TGI+VID+ TP
Sbjct: 99  TGHVWNALGQCLDTPGHGNDALRWG-----IHRHAPRFDQLEGRTEMLETGIKVIDLLTP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+    R  +  F  V + + VGER RE  + I +      
Sbjct: 154 YVAGGKIGLFGGAGVGKTVLIQEMIRRVAQEFGGVSVFAGVGERTREGNDLITEMTESGV 213

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           ++ + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T 
Sbjct: 214 IESTALVFGQMDEPPGTRLRVALSALTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSTL 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + L
Sbjct: 274 LGRMPSAVGYQPTLADEMGELQERI--TSTRGHSITSLQAIYVPADDITDPAPHTTFAHL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R ++E+G YP VDPL S SR+ D  +   E   +  ++  ++ R++E +DI  
Sbjct: 332 DATTVLSRPISEKGIYPAVDPLDSTSRILDPQYVGQEHYAIAQTVKQVLQRYQELQDIIA 391

Query: 392 IGG 394
           I G
Sbjct: 392 ILG 394


>gi|78189967|ref|YP_380305.1| F0F1 ATP synthase subunit beta [Chlorobium chlorochromatii CaD3]
 gi|118573520|sp|Q3AP13|ATPB_CHLCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78172166|gb|ABB29262.1| ATP synthase F1 subcomplex beta subunit [Chlorobium chlorochromatii
           CaD3]
          Length = 462

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 163/304 (53%), Gaps = 13/304 (4%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR++N +G PIDG   +     +  I    P   +     + F+TGI+VID+  P 
Sbjct: 83  AEVLGRMLNVVGDPIDGRGPVNSKK-TYSIHRSAPKFEDISTKAEMFETGIKVIDLLEPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
             G + G+F G+G+GK+ L+     ++  +   F   + + VGER RE  +   + +   
Sbjct: 142 SRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFS--VFAGVGERTREGNDLWHEMMESG 199

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
            + K+ +V    +E P  R+   LT ++IAEYF  + + +VLL +D+I RF  +  E++ 
Sbjct: 200 VIDKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSA 259

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L +RI     +KG++T+V ++ V  D+  DP   +  + 
Sbjct: 260 LLGRMPSAVGYQPTLATEMGQLQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFTH 317

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+RS+AE G YP VDPL S SR+ D     D+      ++  L+ R+++ +DI 
Sbjct: 318 LDATTVLSRSIAELGIYPAVDPLDSTSRILDPNVVGDDHYNTAQAVKQLLQRYKDLQDII 377

Query: 391 LIGG 394
            I G
Sbjct: 378 AILG 381


>gi|293363728|ref|ZP_06610471.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2]
 gi|292552693|gb|EFF41460.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2]
          Length = 407

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ + LG PID   +  +       +  +PP    Q+   +  +TGI+VID+  P   
Sbjct: 29  LGRMFDVLGNPIDLIPN--QNWTKTNPIHAMPPTYEEQKSTSEILETGIKVIDLLIPYSK 86

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      L K
Sbjct: 87  GGKIGLFGGAGVGKTVLVQELINNIATEHNGLSVFAGVGERTREGNDLYHEMKAAGVLDK 146

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G 
Sbjct: 147 TALVFGQMNEPPGARMRVALTGLTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGR 206

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   +G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 207 MPSAVGYQPTLATEMGQLQERI--TSTRRGSITSVQAVYVPADDLTDPAPATTFTHLDAK 264

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            VL+R++A  G YP +DPL+S SRL D     +E   V+  + +++ RF+E +DI  I G
Sbjct: 265 TVLDRNIAALGIYPAIDPLSSSSRLLDPLVVGNEHYSVAQGVLNILQRFKELQDIIAILG 324


>gi|229823983|ref|ZP_04450052.1| hypothetical protein GCWU000282_01287 [Catonella morbi ATCC 51271]
 gi|229786337|gb|EEP22451.1| hypothetical protein GCWU000282_01287 [Catonella morbi ATCC 51271]
          Length = 485

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 159/304 (52%), Gaps = 14/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF---KTGIRVIDIFT 156
              GRV N LG+PID    +G+ D   E+     PA   + +   +   +TGI+VID+  
Sbjct: 97  VTLGRVFNVLGQPID---DMGRLDGDHEVRGIHRPAPTFEELSSSYTILETGIKVIDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +       IS+   VGER RE  + + +     
Sbjct: 154 PYIKGGKIGLFGGAGVGKTVLIQELIHNIAEQLGGISVFTGVGERTREGNDLVFEMRESG 213

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIAT 271
           + KK+ +V    +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++ 
Sbjct: 214 VNKKTAMVFGQMNEPPGARMRVVLTGLTMAEYFRDELKQDVLLFIDNIFRFTQAGSEVSA 273

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ SE+  + ERI  +  + G+IT++ +V V  D++ DP   +  + 
Sbjct: 274 LLGRMPSAVGYQPTLASEMGAMQERI--TSTKNGSITSIQAVYVPADDYTDPAPATTFAH 331

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L R L E+G YP VDPLAS S  LA++        +   +  ++ R+ E +DI 
Sbjct: 332 LDATTNLERRLTEQGIYPAVDPLASTSSALAEEIVGQRHYNIALKVQKILQRYRELQDII 391

Query: 391 LIGG 394
            I G
Sbjct: 392 AILG 395


>gi|219670787|ref|YP_002461222.1| F0F1 ATP synthase subunit beta [Desulfitobacterium hafniense DCB-2]
 gi|254808146|sp|B8FZ34|ATPB_DESHD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219541047|gb|ACL22786.1| ATP synthase F1, beta subunit [Desulfitobacterium hafniense DCB-2]
          Length = 465

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LGK ID  + +   D S  I    P  +++       +TGI+VID+  P  
Sbjct: 85  ATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYS 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      + 
Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K  +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 204 KMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +    G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 264 RMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VLNR+++E+G YP VDPL S SR L+ +    +  K+   +  ++ +++E +DI  I 
Sbjct: 322 TTVLNRAISEKGIYPAVDPLDSNSRILSPQILGEEHYKVARDVQQILQKYKELQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|302388308|ref|YP_003824130.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
 gi|302198936|gb|ADL06507.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
          Length = 464

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 21/300 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIF 155
            GR+ N LG PID   +        E+    P     P    Q  E +  +TGI+V+D+ 
Sbjct: 89  LGRIFNVLGDPIDNKPA-------PEVKEHFPIHRPAPNFEEQSTETEVLETGIKVVDLL 141

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +    
Sbjct: 142 CPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMQES 201

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    LT +T+AEYF  +G  +VLL +D+I RF  +  E++
Sbjct: 202 GVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVS 261

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 262 ALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFA 319

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+RS+ E G YP VDPL S SR+ D     +E  ++   +  ++ +++E +DI
Sbjct: 320 HLDATTVLDRSIVELGIYPAVDPLGSTSRILDPRIVGEEHYRVARGVQEVLQKYKELQDI 379


>gi|182679688|ref|YP_001833834.1| F0F1 ATP synthase subunit beta [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635571|gb|ACB96345.1| ATP synthase F1, beta subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 483

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 156/294 (53%), Gaps = 10/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+++ +G+  D    L  G + +  + + PP + +Q      F TGI+VID+  PL  G
Sbjct: 88  GRLLDVVGRIGDKGGDLPAG-VPLRPIHRAPPPLTQQTGTSSLFATGIKVIDLLAPLAQG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +  +F G+G+GK+ L+     +       IS+   VGER RE  E + D      L ++
Sbjct: 147 GKAAMFGGAGVGKTVLVMELIHAMVASYQGISVFAGVGERSREGHEMLLDMAQSKVLDRT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R   P+TA+TIAEYF  +   NVLL++D+I RF  +  E++   G L
Sbjct: 207 VLVYGQMNEPPGARWRVPMTALTIAEYFRDECHRNVLLLMDNIFRFVQAGAEVSGLLGRL 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ SE+  L ERI  +      +TA+ +V V  D+  DP   ++ S +D  +
Sbjct: 267 PSRVGYQPTLASEVAALQERI--ASVSGAAVTAIEAVYVPADDFTDPAVTTIASHVDSMV 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
           VL+R++A EG YP VDP+AS S L D      D   + + +   I  + E +D+
Sbjct: 325 VLSRAMAAEGMYPAVDPIASSSILLDPLIVGQDHVDVANEVRRTIEHYRELQDV 378


>gi|329117011|ref|ZP_08245728.1| ATP synthase F1, beta subunit [Streptococcus parauberis NCFD 2020]
 gi|326907416|gb|EGE54330.1| ATP synthase F1, beta subunit [Streptococcus parauberis NCFD 2020]
          Length = 468

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 159/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG  ID ++     D   E + K  PA +         +TGI+VID+  P   
Sbjct: 89  LGRVFNVLGDTIDLEEPFA-ADAKREPIHKQAPAFDELSTSSEILETGIKVIDLLAPYLK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      ++K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYGEMKESGVIEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 326 TNLERKLTQIGIYPAVDPLASSSRALSPEIVGKEHYDVATGVQRVLQRYRELQDIIAILG 385


>gi|46909247|gb|AAT06141.1| ATP synthase beta subunit [Lestes congener]
          Length = 342

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +    L+  I +  P  ++    ++   TGI+V+
Sbjct: 14  IRIPVGVETLGRIINVIGEPIDERGPVPTDKLA-SIHADAPEFVDMSVEQEILVTGIKVV 72

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 73  DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 131

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 132 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 191

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 192 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 249

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     AD   +   +  +
Sbjct: 250 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGADHYNVARGVQKI 309

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 310 LQDYKSLQDIIAILG 324


>gi|213406065|ref|XP_002173804.1| ATP synthase subunit beta [Schizosaccharomyces japonicus yFS275]
 gi|212001851|gb|EEB07511.1| ATP synthase subunit beta [Schizosaccharomyces japonicus yFS275]
          Length = 518

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     S  I ++ P    +    +  +TGI+V+D+  P   G
Sbjct: 131 LGRIMNVIGEPIDERGPIKAAKYS-PIHAEAPSFEEQSTSPEILETGIKVVDLLAPYARG 189

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL--G 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +   
Sbjct: 190 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYREMQETGVIKL 248

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           D   K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 249 DGESKAALVFGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVS 308

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 309 ALLGRIPSAVGYQPTLATDMGAMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 366

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+RS++E G YP VDPL S SR+ D     +E   L SS+  ++  ++  +DI
Sbjct: 367 HLDATTVLSRSISEMGIYPAVDPLDSKSRMMDPRIVGEEHYNLASSVQRMLQEYKSLQDI 426

Query: 390 RLIGG 394
             I G
Sbjct: 427 IAILG 431


>gi|293375573|ref|ZP_06621847.1| ATP synthase F1, beta subunit [Turicibacter sanguinis PC909]
 gi|325836771|ref|ZP_08166238.1| ATP synthase F1, beta subunit [Turicibacter sp. HGF1]
 gi|292645790|gb|EFF63826.1| ATP synthase F1, beta subunit [Turicibacter sanguinis PC909]
 gi|325491149|gb|EGC93438.1| ATP synthase F1, beta subunit [Turicibacter sp. HGF1]
          Length = 467

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 15/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G     I  + P         +  +TGI+V+D+  P  
Sbjct: 87  ATLGRIFNVLGQPVDNKGEVPAGTPHEGIHKEAPKFEELSTTVEILETGIKVVDLLAPYI 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      + 
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTESGVIN 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G
Sbjct: 207 KTAMVFGQMNEPPGARLRVALTGLTMAEYFRDELKQDVLLFIDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  ++G+IT++ +V V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKEGSITSIQAVYVPADDYTDPAPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R +A  G YP VDPLAS SR L+      +   +   +  ++ R+ E +DI  I 
Sbjct: 325 TTNLERRIAAMGIYPAVDPLASTSRALSPDIVGQEHYDVARRVQMMLQRYRELQDIIAI- 383

Query: 394 GYRPGVDLILD---KAVHQVPIIYDFLKQS 420
               G+D + +   K VH+   +  FL QS
Sbjct: 384 ---LGMDELSEEDKKVVHRARRVQLFLSQS 410


>gi|67906678|gb|AAY82766.1| predicted F0F1-type ATP synthase beta subunit [uncultured bacterium
           eBACred22E04]
          Length = 459

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+P+D    + K + +M I    P    +    +  +TGI+V+D+  P   G
Sbjct: 83  LGRIMNVLGEPVDNAGDI-KAEKTMPIHRAAPTFSEQASEVEILETGIKVVDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ +L    R+   +    S+   VGER RE  +F  +      + K 
Sbjct: 142 SKVGLFGGAGVGKTVILMELIRNIAAEHSGFSVFAGVGERTREGNDFFHEMTDAKVIDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G + LL +D+I R+  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGSDTLLFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++AE G YP VDPL S SR  D      E      ++  ++ +++E +DI  I G
Sbjct: 320 LSRNIAELGIYPAVDPLDSTSRQLDPLIIGQEHYDTTRAVQGVLQKYKELKDIIAILG 377


>gi|146286055|sp|A2RMI2|ATPB_LACLM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|6048355|gb|AAF02210.1| H+-ATPase cytoplasmic F1-part beta-subunit [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|15963437|dbj|BAB69471.1| H+-ATPase beta subunit [Lactococcus lactis subsp. lactis]
 gi|300071522|gb|ADJ60922.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 469

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  IDG +          I  K P         +   TGI+V+D+  P   G
Sbjct: 90  LGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 150 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 270 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L  +    +  ++   +  ++ R++E +DI  I G
Sbjct: 328 NLERRLTQMGIYPAVDPLASSSRALTPEIVGEEHYEVAMEVQRVLQRYKELQDIIAILG 386


>gi|330505856|ref|YP_004382725.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01]
 gi|328920142|gb|AEB60973.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01]
          Length = 458

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +   EI    P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEAGPIGEEE-QWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      +  +    + +++ R++E +DI  I G
Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGTEHYETARGVQYVLQRYKELKDIIAILG 377


>gi|325688349|gb|EGD30368.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK72]
          Length = 468

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFSEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|149375664|ref|ZP_01893433.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893]
 gi|149360066|gb|EDM48521.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893]
          Length = 464

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G+ +    I  K P   ++       +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEQGEIGEEE-RWAIHRKAPGYADQSASADLLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  S LD  +
Sbjct: 261 PSAVGYQPTLAQEMGELQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATV 318

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +A +G YP +DPL S SR  D     DE  ++   +   + R++E +DI  I G
Sbjct: 319 VLSRDIASKGIYPAIDPLDSTSRQLDPLVIGDEHYEVARGVQTNLQRYKELKDIIAILG 377


>gi|292493904|ref|YP_003529343.1| ATP synthase F1 subunit beta [Nitrosococcus halophilus Nc4]
 gi|291582499|gb|ADE16956.1| ATP synthase F1, beta subunit [Nitrosococcus halophilus Nc4]
          Length = 458

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 169/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S G  V + G    +   A   GR+++ LG P+D    +G+ +    
Sbjct: 49  VVRTIAMGSSDGLSRGMAVTNTGSPISVPVGAKTLGRIMDVLGDPVDEAGPVGEEE-RWA 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P         +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 108 IHRKAPTYEELSPATELLETGIKVVDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAT 167

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +      L K  +V    +E P  R    LT +T+AE
Sbjct: 168 EHAGYSVFAGVGERTREGNDFYHEMKESQVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 227

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 228 YFREEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D 
Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDP 345

Query: 364 AWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
                E   V+ S+   + R++E +DI  I G
Sbjct: 346 LIVGQEHYQVARSVQGNLQRYKELKDIIAILG 377


>gi|295101398|emb|CBK98943.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 464

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 159/305 (52%), Gaps = 10/305 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GRV N LG+P+D +      +    I    P    +Q   +  +TGI+V+D+ 
Sbjct: 82  PVGDQCLGRVFNLLGEPVD-NKPAPTPEAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +    
Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++
Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A +G YP VDPL S SR L+ +    +  ++  ++  ++ R++E +DI
Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARAVQKVLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAIMG 383


>gi|302767210|ref|XP_002967025.1| hypothetical protein SELMODRAFT_144585 [Selaginella moellendorffii]
 gi|300165016|gb|EFJ31624.1| hypothetical protein SELMODRAFT_144585 [Selaginella moellendorffii]
          Length = 427

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 23/312 (7%)

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           C  GR++N +G+PID  GD      D  + I  + P    +   ++   TGI+V+D+  P
Sbjct: 34  CTLGRIMNVIGEPIDEIGDFVT---DHYLPIHREAPVFTEQSTEQEVLVTGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     +E IE  
Sbjct: 91  YQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYKEMIESG 149

Query: 209 --YLGD--NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
              LGD  N  K  +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF 
Sbjct: 150 VIKLGDKQNESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFT 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP
Sbjct: 210 QANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R ++E G YP VDPL S SR L+ +    D  +    +  ++  
Sbjct: 268 APATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPRVIGGDHYQCARDVQKVLQS 327

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 328 YKNLQDIIAILG 339


>gi|297569851|ref|YP_003691195.1| ATP synthase F1, beta subunit [Desulfurivibrio alkaliphilus AHT2]
 gi|296925766|gb|ADH86576.1| ATP synthase F1, beta subunit [Desulfurivibrio alkaliphilus AHT2]
          Length = 473

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR++N +G+ +DG   + K D  M  + K  PA   Q  E    +TGI+VID+  P   G
Sbjct: 94  GRIMNVVGRSVDGMGEI-KSD-KMRPIHKPAPAFTEQDTEVHVLETGIKVIDLLVPFPRG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G GK+ ++     +       IS+   VGER RE  +   +      L K+
Sbjct: 152 GKMGLFGGAGCGKTVIMMEMVNNIAMHHGGISVFCGVGERTREGNDLYHEMKESGVLPKA 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V     E P  R    LT ++ AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMTEPPGARSRVALTGLSAAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRI 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ ++L  L ERI  +   KG+ITAV  V V  D+  DP   +  + LDG +
Sbjct: 272 PSAVGYQPTLGTDLGGLQERI--TSTTKGSITAVQCVYVPADDLTDPAPATTFAHLDGTV 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D      D  ++   +   + ++++ +DI  I G
Sbjct: 330 VLSRQIAELGIYPAVDPLDSTSRILDPNVLGEDHYQVARGVQVTLQKYKDLQDIIAILG 388


>gi|292492281|ref|YP_003527720.1| ATP synthase F1 subunit beta [Nitrosococcus halophilus Nc4]
 gi|291580876|gb|ADE15333.1| ATP synthase F1, beta subunit [Nitrosococcus halophilus Nc4]
          Length = 466

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 13/299 (4%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHGQ 162
           RV+N  G+P+DG   L     S   +   P A+++ R + +  +TGI+VID+  P   G 
Sbjct: 97  RVLNIFGEPLDGSPPLAPQ--SYRNIHGKPLALHQARGINEILETGIKVIDLLCPFIRGG 154

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKKS 217
           + G+F G+G+GK+ L+  F  +       +S+   VGER RE  E   D L D   + +S
Sbjct: 155 KTGLFGGAGVGKTVLIMEFMHAIAHIHKGVSVFAGVGERIREGHELWHD-LQDAAVMSQS 213

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++V    DESP +R    LTA+T AEY   +    VL ++D++ RF  +  EI++  G +
Sbjct: 214 LLVFGEMDESPGVRFRIGLTALTYAEYLRDTLHKEVLFLMDNVFRFVQAGSEISSLLGRM 273

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ +E+  + ERI     +KG ITAV +V V  D+  DP   ++ S LD  +
Sbjct: 274 PATAGYQPTLATEVAEMEERI--VSTDKGAITAVQAVYVPADDMTDPAVSTILSHLDTTV 331

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           +L+R+ A +G YP VDPL S S+L D+    D    ++  +   + R+ E  DI  + G
Sbjct: 332 ILSRAQAGKGIYPAVDPLRSGSKLMDRHILGDRHYAIAEGVREHLARYHELEDIMTMLG 390


>gi|118573713|sp|Q6MAK7|ATPB_PARUW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 464

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N LG+PID   ++   ++S   + K  P    Q  +   F+TGI+VID+  P   G
Sbjct: 88  GRLLNVLGQPIDEMGAIENAEISP--IHKASPTFEEQDTQGVIFETGIKVIDLLCPYTKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GKS ++     +        S+   +GER RE  + ++E      L K+
Sbjct: 146 GKVGLFGGAGVGKSVIVMELIHNIATHHGGYSVFCGIGERTREGNDLWLEMKESGILSKT 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE+F   +  NVLL +D+I RF  +  E++   G +
Sbjct: 206 SLVFGQMNEPPGARMRVGLTGLTMAEHFRDQEHQNVLLFIDNIFRFVQAGSEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+  L ERI  +  + G+IT+V ++ V  D++ DP   S+   LD   
Sbjct: 266 PSAVGYQPTLASEIGSLQERI--TSTKHGSITSVQAIYVPADDYTDPAPASIFPHLDAAT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            L+R +AE G YP VDPL S SR+ D     +E   V+  +  ++ R+++ +DI  I G
Sbjct: 324 TLSRQIAELGIYPAVDPLNSSSRILDPHVLGEEHYQVARQVQKVLQRYKDLQDIIAILG 382


>gi|112791396|gb|ABI21968.1| ATP synthase beta subunit [Pectobacterium cypripedii]
          Length = 426

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 21/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME---------IMSKVPPAMNRQRVEKGFKTGIR 150
              GR++N LG+PID      KGDL  E         I    P    +   ++  +TGI+
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDLKEEDGSAVEVSSIHRAAPSYEEQSNSQELLETGIK 112

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207
           VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  
Sbjct: 113 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 172

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  + 
Sbjct: 173 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 232

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   
Sbjct: 233 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 290

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E
Sbjct: 291 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 350

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 351 LKDIIAILG 359


>gi|332017324|gb|EGI58074.1| ATP synthase subunit beta, mitochondrial [Acromyrmex echinatior]
          Length = 489

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D    I +  P  ++    ++   TGI+V+
Sbjct: 126 IRIPVGAETLGRIINVIGEPIDERGPIAT-DKVAPIHADAPEFVHMSVEQEILVTGIKVV 184

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 185 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 243

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 244 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 303

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 304 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 361

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 362 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARDVQKI 421

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 422 LQDYKSLQDIIAILG 436


>gi|229577383|ref|NP_001153366.1| ATP synthase subunit beta, mitochondrial [Nasonia vitripennis]
          Length = 517

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +    L+  I +  P  ++    ++   TGI+V+
Sbjct: 123 IRIPVGAETLGRIINVIGEPIDERGPIPTDKLA-SIHADAPEFVDMSVEQEILVTGIKVV 181

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     +E
Sbjct: 182 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYQE 240

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 241 MIESGVISLKDKTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 300

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 301 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 358

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 359 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 418

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 419 LQDYKSLQDIIAILG 433


>gi|125624725|ref|YP_001033208.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493533|emb|CAL98514.1| ATP synthase F1, beta subunit [Lactococcus lactis subsp. cremoris
           MG1363]
          Length = 486

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  IDG +          I  K P         +   TGI+V+D+  P   G
Sbjct: 107 LGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKG 166

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 167 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 226

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 227 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRM 286

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 287 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 344

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L  +    +  ++   +  ++ R++E +DI  I G
Sbjct: 345 NLERRLTQMGIYPAVDPLASSSRALTPEIVGEEHYEVAMEVQRVLQRYKELQDIIAILG 403


>gi|260426709|ref|ZP_05780688.1| ATP synthase F1, beta subunit [Citreicella sp. SE45]
 gi|260421201|gb|EEX14452.1| ATP synthase F1, beta subunit [Citreicella sp. SE45]
          Length = 476

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 156/296 (52%), Gaps = 12/296 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++  G   DG  +L        I +  PP   +    + F TGI+VID+  PL  G
Sbjct: 91  LGRLLDVTGATGDGLGALPDDTPRRPIHAPPPPLGAQGAGSEIFYTGIKVIDLLAPLAQG 150

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
            +  +F G+G+GK+ L+     +M AR +     + S VGER RE  E + D      L 
Sbjct: 151 GKAAMFGGAGVGKTVLVMELINAMVARYEGIS--VFSGVGERSREGHEMLSDMTAAGVLD 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++V+V    +E P  R   P+TA+ IAE+F  ++  NVLL++D++ RF  +  E++   G
Sbjct: 209 RTVLVYGQMNEPPGARWRVPMTALAIAEHFRDAEARNVLLLMDNVFRFVQAGSEVSGLLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +    GY  ++ +E+  L ERI  SE     ITA+ +V V  D+  DP   ++ + +D 
Sbjct: 269 RMASRVGYQPTLATEVAELQERIAASESAA--ITAIEAVYVPADDFTDPAVTTIATHVDS 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            +VL+R++A +G YP VDP+AS S L D     DE   + + +   I  + E +D+
Sbjct: 327 TVVLSRAMAADGMYPAVDPIASGSILLDPLILGDEHVSVANQVRRAIEHYRELQDV 382


>gi|160943200|ref|ZP_02090436.1| hypothetical protein FAEPRAM212_00686 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445439|gb|EDP22442.1| hypothetical protein FAEPRAM212_00686 [Faecalibacterium prausnitzii
           M21/2]
          Length = 470

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ + LG+PIDG  ++ +      I  K P    ++   +  +TGI+VID+  P   G 
Sbjct: 86  GRMFDPLGRPIDGKGAVDELP-HWPIHRKAPGFAEQKPATEILETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLDKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +EL  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLANELGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R + E+G YP VDPLAS SR+ +     +E  ++   +  ++ R++E +DI  I G
Sbjct: 323 LSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQSILQRYQELQDIIAILG 380


>gi|295105220|emb|CBL02764.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 470

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ + LG+PIDG  ++ +      I  K P    ++   +  +TGI+VID+  P   G 
Sbjct: 86  GRMFDPLGRPIDGKGAVDELP-HWPIHRKAPGFAEQKPATEILETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLDKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +EL  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLANELGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R + E+G YP VDPLAS SR+ +     +E  ++   +  ++ R++E +DI  I G
Sbjct: 323 LSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQSILQRYQELQDIIAILG 380


>gi|295100292|emb|CBK97837.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 470

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ + LG+PIDG  S+   D+    I  K P    ++   +  +TGI+VID+  P   G
Sbjct: 86  GRMFDPLGRPIDGKGSVD--DVPHWPIHRKAPSFAEQKPATEILETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLNKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +EL  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLANELGALQERI--TSTRDGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPLAS SR+ +     +E  ++   +   + R++E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQATLQRYQELQDIIAILG 380


>gi|269914443|pdb|3GQB|B Chain B, Crystal Structure Of The A3b3 Complex From V-Atpase
 gi|269914445|pdb|3GQB|D Chain D, Crystal Structure Of The A3b3 Complex From V-Atpase
          Length = 464

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 164/316 (51%), Gaps = 22/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +GKPIDG   +   +  + I       + R++ E+  +TGI  ID
Sbjct: 81  RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPITGLPLNPVARRKPEQFIQTGISTID 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200
           +   L  GQ++ +F+GSG+  + + +  AR                   V+ + +G   R
Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199

Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
           E+  FI+++     L +SV+ +  +D+  I R + P  A+T+AEY + + D +VL+IL  
Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +T ++ ++REI     E+P  RGYP  ++++L  + ER G  E +KG++T +  + +  D
Sbjct: 260 MTNYSEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374
           +   PI D    I +G I L+R L  +G YPP+DPL S+SRL +    K  + ++ K VS
Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379

Query: 375 SLTHLIHRFEETRDIR 390
               L   +    DIR
Sbjct: 380 D--QLYSAYANGVDIR 393


>gi|260595802|ref|YP_003208373.1| F0F1 ATP synthase subunit beta [Cronobacter turicensis z3032]
 gi|260214979|emb|CBA26614.1| ATP synthase subunit beta [Cronobacter turicensis z3032]
          Length = 460

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFREEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|188580722|ref|YP_001924167.1| F0F1 ATP synthase subunit beta [Methylobacterium populi BJ001]
 gi|179344220|gb|ACB79632.1| ATP synthase F1, beta subunit [Methylobacterium populi BJ001]
          Length = 484

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 161/320 (50%), Gaps = 22/320 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR++N +G+PID    + + D    I    P    +    +   TGI+V+
Sbjct: 86  IRVPVGHNTLGRIMNVIGEPIDEAGPI-EADTYRAIHQPAPSYDEQSTEAQILVTGIKVV 144

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAG-VGERTREGNDLYHE 203

Query: 205 FIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
            IE  +  N K         K  +V    +ESP  R    LT +TIAE F  +G +VL  
Sbjct: 204 MIESNVNKNPKENNGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEQFRDEGQDVLFF 263

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V
Sbjct: 264 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYV 321

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374
             D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+   A   +E   V+ 
Sbjct: 322 PADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAILGEEHYDVAR 381

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++  +DI  I G
Sbjct: 382 RVQQTLQRYKSLQDIIAILG 401


>gi|118573528|sp|Q24MP1|ATPB_DESHY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 465

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LGK ID  + +   D S  I    P  +++       +TGI+VID+  P  
Sbjct: 85  ATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYS 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      + 
Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K  +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 204 KMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +    G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 264 RMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VLNR+++E+G YP VDPL S SR L+ +    +  K+   +  ++ +++E +DI  I 
Sbjct: 322 TTVLNRAISEKGIYPAVDPLDSNSRILSPQIIGEEHYKVARDVQQILQKYKELQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|4100657|gb|AAD00918.1| proton-translocating ATPase beta subunit [Streptococcus sanguinis]
          Length = 468

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFADDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|84385785|ref|ZP_00988815.1| ATP synthase subunit B [Vibrio splendidus 12B01]
 gi|86145156|ref|ZP_01063487.1| ATP synthase subunit B [Vibrio sp. MED222]
 gi|84379101|gb|EAP95954.1| ATP synthase subunit B [Vibrio splendidus 12B01]
 gi|85836733|gb|EAQ54853.1| ATP synthase subunit B [Vibrio sp. MED222]
          Length = 461

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+ + S EI  + P    +    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGQPIDECGEIGQKE-SYEIHREAPSYEEQANSTELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +   +G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTRQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   +   +   + R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDIAQKVQTTLQRYKELKDIIAILG 380


>gi|283836156|ref|ZP_06355897.1| hypothetical protein CIT292_10581 [Citrobacter youngae ATCC 29220]
 gi|291068349|gb|EFE06458.1| ATP synthase F1, beta subunit [Citrobacter youngae ATCC 29220]
          Length = 460

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGHPIDM-----KGDIGEEERWAIHRAAPTYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|163814609|ref|ZP_02205998.1| hypothetical protein COPEUT_00760 [Coprococcus eutactus ATCC 27759]
 gi|158450244|gb|EDP27239.1| hypothetical protein COPEUT_00760 [Coprococcus eutactus ATCC 27759]
          Length = 453

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 163/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ IDG + L   D    ++ + PP   N+  V +  +TGI+VID+  P   G
Sbjct: 77  GRLFNVLGETIDGKEDLS--DTEHWVIHREPPTFENQSPVIEILETGIKVIDLLAPYSKG 134

Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+    +   S      I + VGER RE  + + E      + K+
Sbjct: 135 GKIGLFGGAGVGKTVLIQELIQNIASVHGGYSIFTGVGERSREGNDLWTEMSESGVIDKT 194

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF      +VLL +D+I RF  +  E+++  G +
Sbjct: 195 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVNHQDVLLFIDNIFRFTQAGSEVSSLLGRM 254

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +++  G++T+V +V V  D+  DP   +  + LD + 
Sbjct: 255 PSAVGYQPTLANEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDANT 312

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I G
Sbjct: 313 VLSRKIVEQGIYPAVDPLESSSRILEADIVGEEHYEVARRVQEILQKYKELQDIIAILG 371


>gi|149003278|ref|ZP_01828174.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP14-BS69]
 gi|237649213|ref|ZP_04523465.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae CCRI 1974]
 gi|237821822|ref|ZP_04597667.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147758738|gb|EDK65735.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP14-BS69]
          Length = 468

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|112791336|gb|ABI21938.1| ATP synthase beta subunit [Citrobacter freundii]
          Length = 421

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGHPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|322385223|ref|ZP_08058870.1| ATP synthase F1 sector beta subunit [Streptococcus cristatus ATCC
           51100]
 gi|321270847|gb|EFX53760.1| ATP synthase F1 sector beta subunit [Streptococcus cristatus ATCC
           51100]
          Length = 468

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFADDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|304413049|ref|ZP_07394522.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus
           Regiella insecticola LSR1]
 gi|304283892|gb|EFL92285.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus
           Regiella insecticola LSR1]
          Length = 462

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 8/301 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P 
Sbjct: 84  AATLGRIMNVLGDPIDMKGPIGEKE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPF 142

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  + +  N L
Sbjct: 143 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMDSNVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G
Sbjct: 203 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|52082213|ref|YP_081004.1| F0F1 ATP synthase subunit beta [Bacillus licheniformis ATCC 14580]
 gi|52787604|ref|YP_093433.1| F0F1 ATP synthase subunit beta [Bacillus licheniformis ATCC 14580]
 gi|319648086|ref|ZP_08002303.1| ATP synthase subunit beta [Bacillus sp. BT1B_CT2]
 gi|81825160|sp|Q65DX4|ATPB_BACLD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|52005424|gb|AAU25366.1| ATP synthase (subunit beta) [Bacillus licheniformis ATCC 14580]
 gi|52350106|gb|AAU42740.1| AtpD [Bacillus licheniformis ATCC 14580]
 gi|317389721|gb|EFV70531.1| ATP synthase subunit beta [Bacillus sp. BT1B_CT2]
          Length = 473

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 162/297 (54%), Gaps = 10/297 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+ ID D+ L   D + + + +  P  ++   E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGENIDLDEPL-PADAAKDPIHREAPKFDQLSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AE+F  K G +VL  +D+I RF  +  E++   
Sbjct: 209 GKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDKEGQDVLFFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
               L R L+E G YP VDPLAS SR L+ +    +  ++  S+  ++ R++E +DI
Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYEVARSVQQILQRYKELQDI 383


>gi|237729043|ref|ZP_04559524.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2]
 gi|226909665|gb|EEH95583.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2]
          Length = 460

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGHPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  L+ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|112791370|gb|ABI21955.1| ATP synthase beta subunit [Brenneria alni]
          Length = 421

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGDPVDM-----KGDIGEEERWAIHRPAPSYEELSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ RF+E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRFQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|194335228|ref|YP_002017022.1| ATP synthase F1, beta subunit [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|226740658|sp|B4SAN6|ATPB_PELPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194307705|gb|ACF42405.1| ATP synthase F1, beta subunit [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 462

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PIDG   +     S  I    P         + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGDPIDGRGPVNTKK-SYSIHRLAPRFDEISTKAEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +   S+   VGER RE  +   + +    + K+
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWHEMMESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R+   LT ++IAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARQRVALTGLSIAEYFRDEEGRDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI     +KG++T+V ++ V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGELQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     D+      ++  L+ R+++ +DI  I G
Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQLLQRYKDLQDIIAILG 381


>gi|46447302|ref|YP_008667.1| F0F1 ATP synthase subunit beta [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400943|emb|CAF24392.1| probable H+-transporting two-sector ATPase (beta chain, atpD)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 486

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N LG+PID   ++   ++S   + K  P    Q  +   F+TGI+VID+  P   G
Sbjct: 110 GRLLNVLGQPIDEMGAIENAEISP--IHKASPTFEEQDTQGVIFETGIKVIDLLCPYTKG 167

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GKS ++     +        S+   +GER RE  + ++E      L K+
Sbjct: 168 GKVGLFGGAGVGKSVIVMELIHNIATHHGGYSVFCGIGERTREGNDLWLEMKESGILSKT 227

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE+F   +  NVLL +D+I RF  +  E++   G +
Sbjct: 228 SLVFGQMNEPPGARMRVGLTGLTMAEHFRDQEHQNVLLFIDNIFRFVQAGSEVSALLGRM 287

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ SE+  L ERI  +  + G+IT+V ++ V  D++ DP   S+   LD   
Sbjct: 288 PSAVGYQPTLASEIGSLQERI--TSTKHGSITSVQAIYVPADDYTDPAPASIFPHLDAAT 345

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +AE G YP VDPL S SR+ D     +E  ++   +  ++ R+++ +DI  I G
Sbjct: 346 TLSRQIAELGIYPAVDPLNSSSRILDPHVLGEEHYQVARQVQKVLQRYKDLQDIIAILG 404


>gi|120556779|ref|YP_961130.1| F0F1 ATP synthase subunit beta [Marinobacter aquaeolei VT8]
 gi|166201716|sp|A1U7H4|ATPB_MARAV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120326628|gb|ABM20943.1| ATP synthase F1 subcomplex beta subunit [Marinobacter aquaeolei
           VT8]
          Length = 464

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +G+ +    I  K P   ++       +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGRPIDEQGDIGE-EERWAIHRKAPGYADQAASADLLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKESNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 AMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +  S LD  +V
Sbjct: 262 SAVGYQPTLAEEMGQLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP +DPL S SR  D     ++   V+  + +++ R++E +DI  I G
Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGEQHYNVARGVQNVLQRYKELKDIIAILG 377


>gi|253690617|ref|YP_003019807.1| ATP synthase F1, beta subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585447|sp|C6DJH2|ATPB_PECCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|251757195|gb|ACT15271.1| ATP synthase F1, beta subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 460

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|237747183|ref|ZP_04577663.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
 gi|229378534|gb|EEO28625.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
          Length = 458

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    + + +    I  K P        ++  +TGI+VID+  P  
Sbjct: 81  ATLGRIMNVLGEPIDEQGPI-QTEERASIHRKAPAYSELSPSQEILETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMQESNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +TIAE F  +G +VL  +D+I RF  +  E++   G
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDQGRDVLFFVDNIYRFTLAGTEVSALLG 258

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +    G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 259 RMPSAVGYQPTLAEEMGKLQERI--TSTNTGSITSIQAVYVPADDLTDPSPATTFAHLDS 316

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D     +E       +  ++ R++E RDI  I 
Sbjct: 317 TVVLSRDIASLGIYPAVDPLDSTSRQLDPHVVGEEHYNTARQVQGILQRYKELRDIIAIL 376

Query: 394 G 394
           G
Sbjct: 377 G 377


>gi|254427887|ref|ZP_05041594.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881]
 gi|196194056|gb|EDX89015.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881]
          Length = 460

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G+ D  M I    P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEAGPIGE-DERMPIHRAAPTYADQAATNELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  + 
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVS 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP +DPL S SR  D      E   +   +  ++ RF+E +DI  I G
Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKDIIAILG 377


>gi|328785025|ref|XP_624156.3| PREDICTED: ATP synthase subunit beta, mitochondrial [Apis
           mellifera]
          Length = 516

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +    L+  I +  P  ++    ++   TGI+V+
Sbjct: 122 IRIPVGAETLGRIINVIGEPIDERGPIPTDKLA-PIHADAPEFVDMSVEQEILVTGIKVV 180

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 239

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 240 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 357

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 417

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 418 LQDYKSLQDIIAILG 432


>gi|307181472|gb|EFN69064.1| ATP synthase subunit beta, mitochondrial [Camponotus floridanus]
          Length = 515

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +    L+  I +  P  +     ++   TGI+V+
Sbjct: 121 IRIPVGAETLGRIINVIGEPIDERGPIPTDKLA-PIHADAPEFVEMSVEQEILVTGIKVV 179

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 239 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 416

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 417 LQDYKSLQDIIAILG 431


>gi|89897658|ref|YP_521145.1| F0F1 ATP synthase subunit beta [Desulfitobacterium hafniense Y51]
 gi|89337106|dbj|BAE86701.1| ATP synthase F1 beta subunit [Desulfitobacterium hafniense Y51]
          Length = 456

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LGK ID  + +   D S  I    P  +++       +TGI+VID+  P  
Sbjct: 76  ATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYS 134

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      + 
Sbjct: 135 KGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 194

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K  +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 195 KMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLG 254

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +    G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 255 RMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLDA 312

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VLNR+++E+G YP VDPL S SR L+ +    +  K+   +  ++ +++E +DI  I 
Sbjct: 313 TTVLNRAISEKGIYPAVDPLDSNSRILSPQIIGEEHYKVARDVQQILQKYKELQDIIAIL 372

Query: 394 G 394
           G
Sbjct: 373 G 373


>gi|296268885|ref|YP_003651517.1| ATP synthase F1 subunit beta [Thermobispora bispora DSM 43833]
 gi|296091672|gb|ADG87624.1| ATP synthase F1, beta subunit [Thermobispora bispora DSM 43833]
          Length = 482

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG+P+D   +  +      I    PP    +   +   TGI+VID+ TP   G 
Sbjct: 102 GHVWNALGEPLDVPKASLEVKERWPIHRPAPPLDQLEPKTEILVTGIKVIDLLTPYMKGG 161

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+    R          + + VGER RE  + ++E      LK + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMIRRVAMKFSGTSVFAGVGERTREGNDLWLEMKEAGVLKDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF+ +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFSQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 282 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDITDPAPHNAFAHLDAQTV 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRLIGG 394
           L+R ++E+G YP VDPL S SR+ D     +E   V+  T  ++ R++E +DI  I G
Sbjct: 340 LSRPISEKGIYPAVDPLESSSRILDPQIVGEEHYQVAQETKRILQRYKELQDIIAILG 397


>gi|254708799|ref|ZP_05170610.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis B2/94]
 gi|256030325|ref|ZP_05443939.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|261316292|ref|ZP_05955489.1| ATP synthase subunit beta [Brucella pinnipedialis B2/94]
 gi|265987359|ref|ZP_06099916.1| ATP synthase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|261295515|gb|EEX99011.1| ATP synthase subunit beta [Brucella pinnipedialis B2/94]
 gi|264659556|gb|EEZ29817.1| ATP synthase subunit beta [Brucella pinnipedialis M292/94/1]
          Length = 521

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 15/305 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL---- 210
            +IG+F G+G+GK+ L+  F  +         + + VGER RE      E IE  +    
Sbjct: 193 GKIGLFGGAGVGKTVLIMEFINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG 252

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E++
Sbjct: 253 GGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEVS 312

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  +
Sbjct: 313 ALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSFA 370

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +DI
Sbjct: 371 HLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQDI 430

Query: 390 RLIGG 394
             I G
Sbjct: 431 IAILG 435


>gi|256545233|ref|ZP_05472598.1| V-type sodium ATPase, B subunit [Anaerococcus vaginalis ATCC 51170]
 gi|256399060|gb|EEU12672.1| V-type sodium ATPase, B subunit [Anaerococcus vaginalis ATCC 51170]
          Length = 457

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 179/354 (50%), Gaps = 23/354 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115
           +GQV++I+ D V +   G  ++ SL D+V  F      I  +    GR  N + +PID G
Sbjct: 40  IGQVVKIDDDTVTVEVFGNTQDFSLNDIVVEFEEKPLEIPLNESILGRTFNGIARPIDDG 99

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            +       S+E     P A  R+      +TGI  IDI T L  GQ++ +F+GSG+  +
Sbjct: 100 GEIYSDKFYSVEGNPLNPVA--REYPRNFIQTGISSIDILTTLIRGQKLPIFSGSGMPHN 157

Query: 176 TLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227
            + +   R          CF   + + +G +  E   F + +    +K  VV+     + 
Sbjct: 158 EIAAQIVRQAKLKTEEDFCF---VFAAMGIKKDEAMFFEDAFTKAGVKDKVVMYENLADD 214

Query: 228 PILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           PI+ ++  P  A+T AEY +  K  +VL+I+  IT +A ++RE+++   E+P  +GYP  
Sbjct: 215 PIMERLITPKCALTAAEYLAFEKNKHVLVIITDITSYAEALREVSSIRQEVPSRKGYPGY 274

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           ++S+L  L ER G  +   G++T +  + +  D+   PI D    I +G IV++RSL ++
Sbjct: 275 LYSDLASLYERAGMIDGVNGSVTLIPILTMPNDDITHPIPDLTGYITEGQIVIDRSLDQK 334

Query: 346 GRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           G YPP++ L S+SRL      +    +D   L++ L     + +E R+I  I G
Sbjct: 335 GIYPPINILPSLSRLMKDGIGEGFTRSDHDDLMNQLYESYSKVQEIRNISQIVG 388


>gi|218676677|ref|YP_002395496.1| F0F1 ATP synthase subunit beta [Vibrio splendidus LGP32]
 gi|218324945|emb|CAV26767.1| ATP synthase subunit B [Vibrio splendidus LGP32]
          Length = 461

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+ + S EI  + P    +    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGQPIDECGEIGQKE-SYEIHREAPSYEEQANSTELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +   +G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTRQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   +   +   + R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDIAQKVQTTLQRYKELKDIIAILG 380


>gi|195450700|ref|XP_002072595.1| GK13685 [Drosophila willistoni]
 gi|194168680|gb|EDW83581.1| GK13685 [Drosophila willistoni]
          Length = 506

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSVEQEILVTGIKVV 168

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 406 LQDYKSLQDIIAILG 420


>gi|307822047|ref|ZP_07652279.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96]
 gi|307736613|gb|EFO07458.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96]
          Length = 464

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 163/316 (51%), Gaps = 10/316 (3%)

Query: 81  ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +S G  VF  G     P +  C GR++N  G+P+DG  SL K +    I SK  P     
Sbjct: 72  LSRGMTVFDTGAPLHVPVSEQCLGRLLNIFGEPLDGLPSLPKTEFR-NIHSKPLPLSEAI 130

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF--ARSDCFDKV-IISLVG 196
            +    +TGI+VID+  P   G + G+F G+G+GK+ L+  F  A S     V + + VG
Sbjct: 131 GMSGILETGIKVIDLLCPFVKGGKTGLFGGAGVGKTVLVMEFIHAVSAIHKGVSVFAGVG 190

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
           ER RE  E   +      +  +++V    DESP +R    L+A+T AEY   +    VL 
Sbjct: 191 ERIREAHELWREMQQAGVMDDTLMVFGQMDESPGVRFRVALSALTYAEYLRDTLHKEVLF 250

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++D++ RF  +  EI++  G +P   GY  ++ +E+  L +RI      +G IT+V +V 
Sbjct: 251 VVDNVFRFVQAGSEISSLLGRMPATVGYQPTLTTEVAELQDRI--LSTRQGAITSVQAVY 308

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   ++ S LD  ++L+R  A +G YP VDPL S S+L DK    D    V+
Sbjct: 309 VPADDMTDPAVSAILSHLDTTVILSRDQASKGIYPAVDPLRSSSKLMDKHTLGDRHYAVA 368

Query: 375 S-LTHLIHRFEETRDI 389
             +   + R+ E  DI
Sbjct: 369 KGVREHLARYHELEDI 384


>gi|225861341|ref|YP_002742850.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230577|ref|ZP_06964258.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255872|ref|ZP_06979458.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298503243|ref|YP_003725183.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254808170|sp|C1CSC8|ATPB_STRZT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|225727517|gb|ACO23368.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238838|gb|ADI69969.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389691|gb|EGE88036.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA04375]
          Length = 468

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|156936112|ref|YP_001440028.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii ATCC BAA-894]
 gi|166201702|sp|A7MMW9|ATPB_ENTS8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|156534366|gb|ABU79192.1| hypothetical protein ESA_04006 [Cronobacter sakazakii ATCC BAA-894]
          Length = 460

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|24638766|ref|NP_726631.1| ATP synthase-beta, isoform A [Drosophila melanogaster]
 gi|194913430|ref|XP_001982694.1| GG16404 [Drosophila erecta]
 gi|47606749|sp|Q05825|ATPB_DROME RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|7304361|gb|AAF59391.1| ATP synthase-beta, isoform A [Drosophila melanogaster]
 gi|21392084|gb|AAM48396.1| RE10864p [Drosophila melanogaster]
 gi|190647910|gb|EDV45213.1| GG16404 [Drosophila erecta]
 gi|220947936|gb|ACL86511.1| ATPsyn-beta-PA [synthetic construct]
 gi|220957230|gb|ACL91158.1| ATPsyn-beta-PA [synthetic construct]
          Length = 505

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 109 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVV 167

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 226

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 227 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 344

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 404

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 405 LQDYKSLQDIIAILG 419


>gi|257439241|ref|ZP_05614996.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
 gi|257198283|gb|EEU96567.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
          Length = 470

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ + LG+PIDG   +   DL    I  K P    ++   +  +TGI+VID+  P   G
Sbjct: 86  GRMFDPLGRPIDGKGPVD--DLPHWPIHRKAPSFAEQKPATEILETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L K+
Sbjct: 144 GKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLNKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF  +   +VLL +D+I RF  +  E++   G +
Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +EL  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 264 PSAVGYQPTLANELGALQERI--TSTRDGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPLAS SR+ +     +E  ++   +   + R++E +DI  I G
Sbjct: 322 VLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQATLQRYQELQDIIAILG 380


>gi|239944301|ref|ZP_04696238.1| F0F1 ATP synthase subunit beta [Streptomyces roseosporus NRRL
           15998]
 gi|239990755|ref|ZP_04711419.1| F0F1 ATP synthase subunit beta [Streptomyces roseosporus NRRL
           11379]
 gi|291447768|ref|ZP_06587158.1| H(+)-transporting ATP synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291350715|gb|EFE77619.1| H(+)-transporting ATP synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 480

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 101 GKVFNTLGQILNEPEAESQITERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R +   D V + + VGER RE  + I++      L K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTDSGVLDKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++E+G YP VDPL S SR+ D  + S D     S +  ++ ++++ +DI  I G
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYNAASRVKGILQKYKDLQDIIAILG 396


>gi|71280422|ref|YP_266830.1| F0F1 ATP synthase subunit beta [Colwellia psychrerythraea 34H]
 gi|118573522|sp|Q48AW0|ATPB_COLP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71146162|gb|AAZ26635.1| ATP synthase F1, beta subunit [Colwellia psychrerythraea 34H]
          Length = 461

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ D    I  + P    +    +  +TGI+VID+  P   G
Sbjct: 86  LGRIMNVLGEPIDEAGPIGEKD-RWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R     T +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 205 SLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +   KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTNKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP +DPL S SR  D      E  +    +  ++ R++E +DI  I G
Sbjct: 323 LSRDIASQGIYPAIDPLDSSSRQLDPLVVGTEHYETARGVQTVLQRYKELKDIIAILG 380


>gi|23015479|ref|ZP_00055254.1| COG0055: F0F1-type ATP synthase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 474

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +G    ++ I +  P  +++    +   TGI+VID+  P C G
Sbjct: 87  LGRIINVIGEPIDERGPIGN-KTTLPIHADAPDFVDQSTETEILVTGIKVIDLLAPYCKG 145

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   +   
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIKL 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  +  E+
Sbjct: 205 DGPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDVEGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATSF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VLNR +AE G YP VDPL S SR+ D +    D  +    +  ++  ++  +D
Sbjct: 323 AHLDATTVLNRQIAELGIYPAVDPLDSTSRVLDPRVVGNDHYQTARDVQRILQTYKSLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|301794520|emb|CBW36962.1| ATP synthase beta chain [Streptococcus pneumoniae INV104]
          Length = 468

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|112791360|gb|ABI21950.1| ATP synthase beta subunit [Serratia marcescens]
          Length = 421

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 158/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+V+D+ 
Sbjct: 58  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVMDLI 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|37524072|ref|NP_927416.1| F0F1 ATP synthase subunit beta [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81572787|sp|Q7NA94|ATPB_PHOLL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|36783495|emb|CAE12335.1| ATP synthase beta chain [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 460

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 17/336 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S G  V   G    +       GR++N LG+PID      KGD+  E
Sbjct: 51  VVRCIAMGTSDGLSRGLSVTDLGHPIEVPVGKATLGRIMNVLGEPIDM-----KGDIGEE 105

Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P        ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R
Sbjct: 106 ERWAIHRPAPSYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 165

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +
Sbjct: 166 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 225

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 226 TMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 283

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 284 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 343

Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             D      E   V+  +  ++ R++E +DI  I G
Sbjct: 344 QLDPLVVGQEHYNVARGVQSILQRYQELKDIIAILG 379


>gi|53716798|ref|YP_104961.1| F0F1 ATP synthase subunit beta [Burkholderia mallei ATCC 23344]
 gi|67641242|ref|ZP_00440025.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
 gi|121597143|ref|YP_990887.1| F0F1 ATP synthase subunit beta [Burkholderia mallei SAVP1]
 gi|126446164|ref|YP_001077353.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10247]
 gi|254176251|ref|ZP_04882909.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
 gi|254202881|ref|ZP_04909243.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
 gi|254208221|ref|ZP_04914570.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
 gi|254359466|ref|ZP_04975738.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
 gi|81823855|sp|Q62EB7|ATPB2_BURMA RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|190358217|sp|A3MAR7|ATPB2_BURM7 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|190358218|sp|A1UY34|ATPB2_BURMS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|52422768|gb|AAU46338.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 23344]
 gi|121224941|gb|ABM48472.1| ATP synthase F1, beta subunit [Burkholderia mallei SAVP1]
 gi|126239018|gb|ABO02130.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10247]
 gi|147745926|gb|EDK53004.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
 gi|147750908|gb|EDK57976.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
 gi|148028653|gb|EDK86613.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
 gi|160697293|gb|EDP87263.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
 gi|238522140|gb|EEP85586.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
          Length = 534

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 16/309 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G  R+       GR+++  G P  GDD      D+    + +  P +  Q+     F TG
Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 165

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203
           I+VID+  PL  G +  +F G+G+GK+  +     +M  R       + + +GER RE  
Sbjct: 166 IKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELIHAMVERYRGIS--VFAGIGERSREGH 223

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           E + D  G   L ++V+V    +E P  R   PLTA+ IAEYF   +  NVLL++D++ R
Sbjct: 224 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 283

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G LP   GY  ++ SE+  L ERI  +  E   +TA+ +V V  D+  
Sbjct: 284 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 341

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   ++ + +D  +VL+R++A EG YP +DP+AS S L D     +    V+  +  +I
Sbjct: 342 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 401

Query: 381 HRFEETRDI 389
             + E +D+
Sbjct: 402 EHYRELQDV 410


>gi|229819802|ref|YP_002881328.1| ATP synthase F1, beta subunit [Beutenbergia cavernae DSM 12333]
 gi|229565715|gb|ACQ79566.1| ATP synthase F1, beta subunit [Beutenbergia cavernae DSM 12333]
          Length = 491

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
           G V N +G P+D +         +EI     + + PPA ++   +   F+TGI+VID+ T
Sbjct: 110 GHVFNVIGDPLDVEAE------KLEITERWSIHRKPPAFDQLESKTSMFETGIKVIDLLT 163

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I +     
Sbjct: 164 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIHEMEEAG 223

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
           +  K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 224 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 283

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 284 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 341

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPLAS SR+ D  +   D  ++ + +  ++ + +E +DI 
Sbjct: 342 LDATTELSRDIASRGLYPAVDPLASTSRILDPRYVGEDHYRVATRVKSILQKNKELQDII 401

Query: 391 LIGG 394
            I G
Sbjct: 402 AILG 405


>gi|195469417|ref|XP_002099634.1| ATPsyn-beta [Drosophila yakuba]
 gi|194185735|gb|EDW99346.1| ATPsyn-beta [Drosophila yakuba]
          Length = 505

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 109 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVV 167

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 226

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 227 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 344

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 404

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 405 LQDYKSLQDIIAILG 419


>gi|148988552|ref|ZP_01819985.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP6-BS73]
 gi|148992608|ref|ZP_01822276.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP9-BS68]
 gi|148997432|ref|ZP_01825037.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP11-BS70]
 gi|149011742|ref|ZP_01832938.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP19-BS75]
 gi|168483883|ref|ZP_02708835.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1873-00]
 gi|168489668|ref|ZP_02713867.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae SP195]
 gi|168492577|ref|ZP_02716720.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC0288-04]
 gi|168493409|ref|ZP_02717552.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC3059-06]
 gi|182684462|ref|YP_001836209.1| ATP synthase subunit B [Streptococcus pneumoniae CGSP14]
 gi|225854952|ref|YP_002736464.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae JJA]
 gi|225857133|ref|YP_002738644.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae P1031]
 gi|225859265|ref|YP_002740775.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae 70585]
 gi|303254154|ref|ZP_07340267.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae BS455]
 gi|303260730|ref|ZP_07346690.1| ATP synthase subunit B [Streptococcus pneumoniae SP-BS293]
 gi|303263057|ref|ZP_07348989.1| ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292]
 gi|303264461|ref|ZP_07350381.1| ATP synthase subunit B [Streptococcus pneumoniae BS397]
 gi|303267439|ref|ZP_07353293.1| ATP synthase subunit B [Streptococcus pneumoniae BS457]
 gi|303269786|ref|ZP_07355535.1| ATP synthase subunit B [Streptococcus pneumoniae BS458]
 gi|307068152|ref|YP_003877118.1| F0F1-type ATP synthase subunit beta [Streptococcus pneumoniae
           AP200]
 gi|226740683|sp|B2IQX0|ATPB_STRPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808168|sp|C1CF93|ATPB_STRZJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808169|sp|C1CLK6|ATPB_STRZP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585452|sp|C1C899|ATPB_STRP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|147756487|gb|EDK63528.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP11-BS70]
 gi|147764173|gb|EDK71105.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP19-BS75]
 gi|147925753|gb|EDK76828.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP6-BS73]
 gi|147928625|gb|EDK79639.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP9-BS68]
 gi|172042786|gb|EDT50832.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1873-00]
 gi|182629796|gb|ACB90744.1| ATP synthase subunit B [Streptococcus pneumoniae CGSP14]
 gi|183571943|gb|EDT92471.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae SP195]
 gi|183573274|gb|EDT93802.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC0288-04]
 gi|183576634|gb|EDT97162.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC3059-06]
 gi|225721547|gb|ACO17401.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae 70585]
 gi|225722310|gb|ACO18163.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae JJA]
 gi|225725216|gb|ACO21068.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae P1031]
 gi|301802228|emb|CBW34978.1| ATP synthase beta chain [Streptococcus pneumoniae INV200]
 gi|302598880|gb|EFL65913.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae BS455]
 gi|302635820|gb|EFL66323.1| ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292]
 gi|302638133|gb|EFL68608.1| ATP synthase subunit B [Streptococcus pneumoniae SP-BS293]
 gi|302640679|gb|EFL71077.1| ATP synthase subunit B [Streptococcus pneumoniae BS458]
 gi|302643030|gb|EFL73323.1| ATP synthase subunit B [Streptococcus pneumoniae BS457]
 gi|302646273|gb|EFL76500.1| ATP synthase subunit B [Streptococcus pneumoniae BS397]
 gi|306409689|gb|ADM85116.1| F0F1-type ATP synthase, beta subunit [Streptococcus pneumoniae
           AP200]
 gi|332072299|gb|EGI82782.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA17570]
 gi|332200067|gb|EGJ14140.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA47368]
 gi|332200947|gb|EGJ15018.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA47901]
          Length = 468

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|15616316|ref|NP_244621.1| F0F1 ATP synthase subunit beta [Bacillus halodurans C-125]
 gi|14916533|sp|Q9K6H5|ATPB_BACHD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|10176378|dbj|BAB07473.1| ATP synthase beta subunit [Bacillus halodurans C-125]
          Length = 470

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D+ +        I  + P         +  +TGI+V+D+  P  
Sbjct: 90  VTLGRVFNVLGESIDLDEPIPADAERSPIHREAPKFEELSTKTEILETGIKVVDLLAPYI 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    L+ +T+AEYF  K G +VLL +D+I RF  +  E++   
Sbjct: 209 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDKQGQDVLLFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  + G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L+E G YP VDPLAS SR L+ +    +   +   +   + +++E +DI  I
Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYNVARQVQQTLQKYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|149193991|ref|ZP_01871089.1| F0F1 ATP synthase subunit beta [Caminibacter mediatlanticus TB-2]
 gi|149135944|gb|EDM24422.1| F0F1 ATP synthase subunit beta [Caminibacter mediatlanticus TB-2]
          Length = 469

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 11/339 (3%)

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +I  ++V    + + + ++ G+ V   G   ++       GR+ N  G  ID  + +   
Sbjct: 49  QIGDNVVRTIAMDLTDGLTRGEKVVATGAPIKVPVGEAVLGRIFNVTGDVIDEGEPI-PA 107

Query: 123 DLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           D+    + + PP    Q  + + F+TGI+V+D+  P   G + G+F G+G+GK+ ++   
Sbjct: 108 DVERWSIHRDPPPFEEQSTKMEIFETGIKVVDLLCPYMKGGKTGLFGGAGVGKTVIIMEL 167

Query: 182 ARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237
             +  +      + + VGER RE  +   +      L K  +     +E P  R    +T
Sbjct: 168 IHNVAYKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGCRNRVAMT 227

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AEYF   +  +VL+ +D+I RFA +  E++   G +P A GY  ++ +E+ RL ER
Sbjct: 228 GLTMAEYFRDVENRDVLMFIDNIFRFAQAGAEMSALLGRIPSAVGYQPTLATEMGRLQER 287

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG+IT++ +V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S
Sbjct: 288 I--TSTKKGSITSIQAVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDS 345

Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            SR+ D     +   K+   +  ++ ++++ +DI  I G
Sbjct: 346 TSRILDPQIVGERHYKVARGVQEVLQKYKDLQDIIAILG 384


>gi|15901355|ref|NP_345959.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae TIGR4]
 gi|15903403|ref|NP_358953.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae R6]
 gi|111657410|ref|ZP_01408163.1| hypothetical protein SpneT_02001380 [Streptococcus pneumoniae
           TIGR4]
 gi|116516544|ref|YP_816797.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae D39]
 gi|148984851|ref|ZP_01818104.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP3-BS71]
 gi|149007587|ref|ZP_01831222.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP18-BS74]
 gi|149021774|ref|ZP_01835781.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP23-BS72]
 gi|168487559|ref|ZP_02712067.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1087-00]
 gi|168575963|ref|ZP_02721878.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae MLV-016]
 gi|169833283|ref|YP_001694914.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           Hungary19A-6]
 gi|221232220|ref|YP_002511373.1| ATP synthase beta chain [Streptococcus pneumoniae ATCC 700669]
 gi|307127712|ref|YP_003879743.1| ATP synthase F1 subunit beta [Streptococcus pneumoniae 670-6B]
 gi|81588075|sp|Q8DP44|ATPB_STRR6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81854993|sp|Q97PT6|ATPB_STRPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122277705|sp|Q04HT9|ATPB_STRP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740682|sp|B1ICS9|ATPB_STRPI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808166|sp|B8ZLA9|ATPB_STRPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|14972998|gb|AAK75599.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae TIGR4]
 gi|15459007|gb|AAL00164.1| Proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus
           pneumoniae R6]
 gi|116077120|gb|ABJ54840.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae D39]
 gi|147760946|gb|EDK67916.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP18-BS74]
 gi|147922873|gb|EDK73989.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP3-BS71]
 gi|147930010|gb|EDK80997.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP23-BS72]
 gi|168995785|gb|ACA36397.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae
           Hungary19A-6]
 gi|183569628|gb|EDT90156.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1087-00]
 gi|183578206|gb|EDT98734.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae MLV-016]
 gi|220674681|emb|CAR69254.1| ATP synthase beta chain [Streptococcus pneumoniae ATCC 700669]
 gi|301800344|emb|CBW32973.1| ATP synthase beta chain [Streptococcus pneumoniae OXC141]
 gi|306484774|gb|ADM91643.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae 670-6B]
 gi|332073842|gb|EGI84320.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA41301]
 gi|332074258|gb|EGI84735.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA17545]
 gi|332199551|gb|EGJ13626.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA41317]
          Length = 468

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|99081926|ref|YP_614080.1| F0F1 ATP synthase subunit beta [Ruegeria sp. TM1040]
 gi|118573747|sp|Q1GEU8|ATPB_SILST RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|99038206|gb|ABF64818.1| ATP synthase F1 beta subunit [Ruegeria sp. TM1040]
          Length = 474

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR++N +G+P+D G+  + K       + +  P  N Q  E     TGI+VID+  P
Sbjct: 84  ATLGRILNVVGEPVDEGEPIVAK---ETRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED 208
              G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE 
Sbjct: 141 YAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIES 198

Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263
            +   DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF 
Sbjct: 199 NVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFT 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VLNR+++E G YP VDPL S SRL D     +E  K+ S +  ++ R
Sbjct: 317 APATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYKVASDVQQILQR 376

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 377 YKSLQDIIAILG 388


>gi|260432839|ref|ZP_05786810.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416667|gb|EEX09926.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 474

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 165/311 (53%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR++N +G+PID    +   +     + +  P+ + Q  E     TGI+V+D+  P 
Sbjct: 84  ATLGRILNVVGEPIDEKGPVEASE--TRAIHQPAPSFDEQSTESEILVTGIKVVDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDY 209
             G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  
Sbjct: 142 AKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESN 199

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
           +   DNL +S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  
Sbjct: 200 VIKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP 
Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VLNR+++E+G YP VDPL S SRL D A   +   K+ + +  ++ R+
Sbjct: 318 PATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGERHYKVATDVQQILQRY 377

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 378 KSLQDIIAILG 388


>gi|195564346|ref|XP_002105781.1| ATPsyn-beta [Drosophila simulans]
 gi|194201657|gb|EDX15233.1| ATPsyn-beta [Drosophila simulans]
          Length = 439

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 164/314 (52%), Gaps = 17/314 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+D
Sbjct: 44  RIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVVD 102

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E 
Sbjct: 103 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNEM 161

Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R
Sbjct: 162 IEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 221

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 222 FTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLT 279

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++
Sbjct: 280 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKIL 339

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 340 QDYKSLQDIIAILG 353


>gi|154338794|ref|XP_001565619.1| ATPase beta subunit [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134062671|emb|CAM39114.1| putative ATPase beta subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 524

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 16/299 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    + +  + M I ++ P   ++   +    TGI+VID+  P C G 
Sbjct: 121 GRIFNVLGDAIDHRGPVCE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 179

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 180 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 238

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G NVLL +D+I RF  +  E++ 
Sbjct: 239 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 298

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 299 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 356

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R++AE G YP V+PL   SR+ D      D   +   +  ++ +++E +DI
Sbjct: 357 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 415


>gi|255280303|ref|ZP_05344858.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
 gi|255269394|gb|EET62599.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
          Length = 463

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+PID  ++  K    + I    P    +    +  +TGI+V+D+  P   G
Sbjct: 89  LGRIFNVIGEPIDNKEA-PKDVQYLPIHRDAPDFEEQATSTEMLETGIKVVDLLCPYQKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + K+
Sbjct: 148 GKTGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMSESGVINKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  +G  +VLL +D+I RF  +  E++   G +
Sbjct: 208 TMVFGQMNEPPGARMRVGLTGLTMAEYFRDEGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+ E G YP VDPL S SR+ D     +E  K+   +  ++ +++E +DI  I G
Sbjct: 326 VLSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVARGVQEILQKYKELQDIIAILG 384


>gi|94676869|ref|YP_588610.1| F0F1 ATP synthase subunit beta [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|118573508|sp|Q1LTV4|ATPB_BAUCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|94220019|gb|ABF14178.1| ATP synthase F1, beta subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 457

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 175/355 (49%), Gaps = 17/355 (4%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           V  GKN   L    ++   IV    +G+ E +  G  V   G   ++        R++N 
Sbjct: 32  VTNGKNKLILEVEQQLGSGIVRCIAMGVSEGLRRGLTVIDLGHAIKVPVGKSTLSRIMNV 91

Query: 109 LGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           LG+PID      KG ++ E    I    P        ++  +TGI+VID+  PL  G + 
Sbjct: 92  LGEPIDM-----KGIINAEEHWSIHRSAPRYEELALSQEILETGIKVIDLMCPLVKGGKA 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  +V
Sbjct: 147 GLFGGAGVGKTVNMMELIRNIAIEHAGYSVFTGVGERTREGNDFYHEMKDSNVLDKVSLV 206

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 207 YGQMNEPPGNRFRVALTGLTIAEKFRDEGHDVLLFIDNIYRYTLAGAEVSALLGRMPSAV 266

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  S LD  IVL+R
Sbjct: 267 GYQPTLSEEMGLLQERI--TSTKYGSITSIQAVYVPADDLTDPAPATTFSHLDATIVLSR 324

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            +A  G YP +DPL S SR  D      +   V+  +  ++ R++E +DI  I G
Sbjct: 325 QIASLGIYPAIDPLESTSRQLDPLVVGQKHYDVALGVQGILQRYQELKDIIAILG 379


>gi|78064765|ref|YP_367534.1| F0F1 ATP synthase subunit beta [Burkholderia sp. 383]
 gi|118573515|sp|Q39KX6|ATPB_BURS3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77965510|gb|ABB06890.1| ATP synthase F1 subcomplex beta subunit [Burkholderia sp. 383]
          Length = 464

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESETTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|257470711|ref|ZP_05634801.1| F0F1 ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185]
 gi|317064916|ref|ZP_07929401.1| ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185]
 gi|313690592|gb|EFS27427.1| ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185]
          Length = 466

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 164/307 (53%), Gaps = 9/307 (2%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++       GR++N LG+P+D D    + +  + I    P    ++   + F+TGI+VID
Sbjct: 77  KVPVGKAVLGRILNVLGQPVD-DGGPIETEEYLPIHRDAPSFEEQETETEIFETGIKVID 135

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210
           +  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+  ++  
Sbjct: 136 LLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLYDEMT 195

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
               L K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E
Sbjct: 196 ESGVLSKTSLVYGQMNEPPGARLRVGLTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSE 255

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   + 
Sbjct: 256 VSALLGRMPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATT 313

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            S LD   VL+R++A  G YP VDPL S S+ L+ +    +  ++   +  ++ R++E +
Sbjct: 314 FSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSAEVVGKEHYEVAREVQEVLQRYKELQ 373

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 374 DIIAILG 380


>gi|237739747|ref|ZP_04570228.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31]
 gi|262066569|ref|ZP_06026181.1| ATP synthase F1, beta subunit [Fusobacterium periodonticum ATCC
           33693]
 gi|229423355|gb|EEO38402.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31]
 gi|291379704|gb|EFE87222.1| ATP synthase F1, beta subunit [Fusobacterium periodonticum ATCC
           33693]
          Length = 462

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +   +  + I  + P   + +   + F+TGI+VID+  P  
Sbjct: 82  AVLGRILNVLGEPVDNQGPV-NAETVLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE R+   +      + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTESGVIT 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   G
Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD 
Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R++A  G YP VDPL S S+ L++     +  ++   +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGKEHYEIARKVQEVLQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|325525633|gb|EGD03407.1| F0F1 ATP synthase subunit beta [Burkholderia sp. TJI49]
          Length = 459

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGRPIDEAGPI-ESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377


>gi|119776776|ref|YP_929516.1| F0F1 ATP synthase subunit beta [Shewanella amazonensis SB2B]
 gi|166222412|sp|A1SBU0|ATPB_SHEAM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119769276|gb|ABM01847.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B]
          Length = 462

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 159/301 (52%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ D  + I    P    +    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGEPVDEAGPIGEEDRYV-IHRAAPSYEEQSNTTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  + +    L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMMESGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + + +++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQNVLQRYKELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|194770714|ref|XP_001967434.1| GF21882 [Drosophila ananassae]
 gi|190618410|gb|EDV33934.1| GF21882 [Drosophila ananassae]
          Length = 506

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSVEQEILVTGIKVV 168

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 406 LQDYKSLQDIIAILG 420


>gi|104784434|ref|YP_610932.1| F0F1 ATP synthase subunit beta [Pseudomonas entomophila L48]
 gi|122985703|sp|Q1I2I7|ATPB_PSEE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|95113421|emb|CAK18149.1| ATP synthase F1, beta subunit [Pseudomonas entomophila L48]
          Length = 458

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G D+V       +       GR+++ LG PID    +G+ +    
Sbjct: 49  VVRTIAMGSTEGLKRGLDVVDTKAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RRG 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P    +       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 108 IHRKAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 167

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G++VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               +E  +    + +++ R++E +DI  I G
Sbjct: 346 NVIGNEHYETARQVQYVLQRYKELKDIIAILG 377


>gi|195134016|ref|XP_002011434.1| GI14045 [Drosophila mojavensis]
 gi|193912057|gb|EDW10924.1| GI14045 [Drosophila mojavensis]
          Length = 506

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVEMSVEQEILVTGIKVV 168

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 406 LQDYKSLQDIIAILG 420


>gi|189218851|ref|YP_001939492.1| F0F1 ATP synthase subunit beta [Methylacidiphilum infernorum V4]
 gi|189185709|gb|ACD82894.1| F0F1-type ATP synthase, beta subunit [Methylacidiphilum infernorum
           V4]
          Length = 484

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 168/311 (54%), Gaps = 12/311 (3%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144
           V+  GR    P S  + GR++N  G+P+DG + + + +    I S  PPA++     K  
Sbjct: 95  VYDTGRVVSIPVSKKYLGRLVNIFGEPLDGMEPV-EPEGYRSIFSD-PPALDTTLGPKSI 152

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            + GI+VID+  P   G + G+F G+G+GK+ L+  F ++       +S+   VGER RE
Sbjct: 153 LEIGIKVIDLLCPFVKGGKTGLFGGAGVGKTVLMMEFMKAVSLIHRGVSVFAGVGERIRE 212

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
             E  ++      + ++++     DESP +R    LTA++ AE+F  S    +L ++D++
Sbjct: 213 GHELWKEMQKAGVMPQTLMAFGQMDESPGVRFRIGLTALSYAEFFRDSLQTEILFLMDNL 272

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P   GY  ++ +E+  L +RI     + GNITAV +V V  D+
Sbjct: 273 FRFVQAGSEVSGLLGRMPAMVGYQPTLLTEVAELQDRI--VSTKSGNITAVQAVYVPADD 330

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
             DP   ++ S LD  ++L+RS A +G YP +DPL S  R+ DK +  +    ++S +  
Sbjct: 331 MTDPAVMAILSHLDTVVILSRSQAAKGFYPAIDPLVSTCRIMDKQFLGERHYTIASGVRK 390

Query: 379 LIHRFEETRDI 389
            + R++E  DI
Sbjct: 391 YLSRYKELEDI 401


>gi|254250972|ref|ZP_04944290.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa
           AUO158]
 gi|124893581|gb|EAY67461.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa
           AUO158]
          Length = 464

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|1304067|dbj|BAA12667.1| proton ATPase beta subunit [Desulfovibrio vulgaris]
 gi|5811568|dbj|BAA83613.1| F1F0-ATPase beta subunit [Desulfovibrio vulgaris]
          Length = 471

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + K D  + I    P    +    +  +TGI+V+D+  PL 
Sbjct: 89  ASLGRIMNVVGRPVDEMGPI-KTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPLG 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ +L     +       IS+   VGER RE  +   +      L+
Sbjct: 148 KGGKMGLFGGAGVGKTVILMEMINNIAKQHGAISVFAGVGERTREGNDLYHEMKDAGVLE 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ ++    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 208 KAALIYGQMNEPPGARARVALTALACAEYFRDIENQDVLLFVDNIFRFTQAGSEVSALLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S LDG
Sbjct: 268 RMPSAVGYQPTLGTDLGGLQERI--TSTVKGSITSVQAVYVPADDLTDPAPATTFSHLDG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP VDPL S SR+ D      E   V+ ++  ++ ++++ +DI  I 
Sbjct: 326 TLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGPEHYSVARAVQQVLQKYKDLQDIIAIL 385

Query: 394 G 394
           G
Sbjct: 386 G 386


>gi|298346228|ref|YP_003718915.1| F0F1 ATP synthase subunit beta [Mobiluncus curtisii ATCC 43063]
 gi|304390009|ref|ZP_07371963.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315654812|ref|ZP_07907717.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii ATCC
           51333]
 gi|315657265|ref|ZP_07910147.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236289|gb|ADI67421.1| F0F1 ATP synthase subunit beta [Mobiluncus curtisii ATCC 43063]
 gi|304326491|gb|EFL93735.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|315490773|gb|EFU80393.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii ATCC
           51333]
 gi|315491737|gb|EFU81346.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 481

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 167/304 (54%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G V N +G+ ++    L +G+ ++E+     + + PPA ++ +   + F+TGI+VID+ T
Sbjct: 100 GHVFNVIGECLN----LKEGE-TLEVKDRWSIHRTPPAFDKLESKTQMFETGIKVIDLLT 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I +     
Sbjct: 155 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIHEMADAG 214

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            L K+ +V    DE P  R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 215 VLDKTAMVFGQMDEPPGTRLRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 274

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 275 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 332

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPLAS SR+ D  +   E  ++ + +  ++ + +E +DI 
Sbjct: 333 LDATTNLSRDIASRGLYPAVDPLASTSRILDPRYVGKEHYEVATQVKQILQKNKELQDII 392

Query: 391 LIGG 394
            I G
Sbjct: 393 AILG 396


>gi|229816334|ref|ZP_04446641.1| hypothetical protein COLINT_03384 [Collinsella intestinalis DSM
           13280]
 gi|229808090|gb|EEP43885.1| hypothetical protein COLINT_03384 [Collinsella intestinalis DSM
           13280]
          Length = 477

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 157/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+P+DG D + + D    I    P         + F+TGI+ +D+  P   G 
Sbjct: 101 GRIWNVMGQPVDGKD-MPEVDAWYPIHHPAPSFDQLTTKTEIFETGIKAVDLLEPYIRGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ L+     +   +     + + VGER RE  + ++E      + K+ 
Sbjct: 160 KTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSESGVIDKTC 219

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G +P 
Sbjct: 220 LVYGQMNEPPGARLRIGLAGLTEAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGRMPS 279

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 280 AVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTVL 337

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +RS+AE G YP +DPLAS S   D A   +E   V+  +  L+  + + +DI  I G
Sbjct: 338 SRSIAELGLYPAIDPLASSSDALDPAIVGEEHYRVAVKVQELLQEYSDLQDIIAILG 394


>gi|322372413|ref|ZP_08046949.1| ATP synthase F1, beta subunit [Streptococcus sp. C150]
 gi|321277455|gb|EFX54524.1| ATP synthase F1, beta subunit [Streptococcus sp. C150]
          Length = 468

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|114706547|ref|ZP_01439448.1| ATP synthase subunit B [Fulvimarina pelagi HTCC2506]
 gi|114537939|gb|EAU41062.1| ATP synthase subunit B [Fulvimarina pelagi HTCC2506]
          Length = 484

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 163/319 (51%), Gaps = 20/319 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR++N +G+PID    +   + +  I    P  +++    +   TGI+VI
Sbjct: 83  IRVPVGDATLGRILNVIGEPIDEVGPVNSNE-TRAIHQSAPDYIDQSPESQILVTGIKVI 141

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+ TP   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + 
Sbjct: 142 DLLTPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEM 201

Query: 210 L--GDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +  G N+            K+ +V    +E P  R    LT +TIAE+F   G +VL  +
Sbjct: 202 IESGVNVDPHKNDGSAEGSKAALVFGQMNEPPGARARVALTGLTIAEHFRDAGQDVLFFV 261

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V 
Sbjct: 262 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVP 319

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VLNRS++E+G YP VDPL S SR+       +E  ++   
Sbjct: 320 ADDLTDPAPATTFTHLDATTVLNRSISEKGIYPAVDPLDSTSRMLQPMIVGEEHYQVARE 379

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ +++  +DI  I G
Sbjct: 380 VQEILQKYKSLQDIIAILG 398


>gi|34499996|gb|AAQ73580.1| ATP synthase beta subunit [Volucribacter psittacicida]
          Length = 444

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  + S  I    P  + +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGEIG-AEESWSIHRAPPSYVEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPDDDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|153853572|ref|ZP_01994952.1| hypothetical protein DORLON_00942 [Dorea longicatena DSM 13814]
 gi|149753727|gb|EDM63658.1| hypothetical protein DORLON_00942 [Dorea longicatena DSM 13814]
          Length = 465

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ ID  + + K      I  K P    +    +  +TGI+VID+ TP   G 
Sbjct: 87  GRLFNVLGETIDNGEPI-KDSEEWVIHRKAPSFEEQSPAVEVLETGIKVIDLLTPYAKGG 145

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +   +     I + VGER RE  + + E      L K+ 
Sbjct: 146 KIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTEMRESGVLDKTA 205

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +P
Sbjct: 206 LVFGQMNEPPGSRMRVAETGLTMAEYFRDVEHQNVLLFIDNIFRFVQAGSEVSALLGRMP 265

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  S LD   V
Sbjct: 266 SAVGYQPTLANEMGALQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFSHLDATTV 323

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R + E+G YP VDPL S SR+ + A   +E  ++   +  ++ +++E +DI  I G
Sbjct: 324 LSRKIVEQGIYPAVDPLDSTSRILEPAVVGEEHYQVARKVQEILQKYKELQDIIAILG 381


>gi|307709043|ref|ZP_07645503.1| ATP synthase F1, beta subunit [Streptococcus mitis SK564]
 gi|307620379|gb|EFN99495.1| ATP synthase F1, beta subunit [Streptococcus mitis SK564]
          Length = 468

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|167587928|ref|ZP_02380316.1| F0F1 ATP synthase subunit beta [Burkholderia ubonensis Bu]
          Length = 459

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   ++  +   + R++E RDI  I G
Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRRVQQTLQRYKELRDIIAILG 377


>gi|134294238|ref|YP_001117973.1| F0F1 ATP synthase subunit beta [Burkholderia vietnamiensis G4]
 gi|166201695|sp|A4JA35|ATPB_BURVG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134137395|gb|ABO53138.1| ATP synthase F1 subcomplex beta subunit [Burkholderia vietnamiensis
           G4]
          Length = 464

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   ++  +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRRVQQTLQRYKELRDIIAILG 382


>gi|253582462|ref|ZP_04859684.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
 gi|251835607|gb|EES64146.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
          Length = 466

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 163/307 (53%), Gaps = 9/307 (2%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++       GR++N LG+P+D    +   +  + I    P    ++   + F+TGI+VID
Sbjct: 77  KVPVGKAVLGRILNVLGQPVDDGGPIETEEF-LPIHRDAPSFEEQETETEIFETGIKVID 135

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210
           +  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+  ++  
Sbjct: 136 LLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLYDEMT 195

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
               L K+ +V    +E P  R    LT +TIAE F  K G +VLL +D+I RF  +  E
Sbjct: 196 ESGVLSKTSLVYGQMNEPPGARLRVGLTGLTIAENFRDKEGQDVLLFIDNIFRFTQAGSE 255

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   + 
Sbjct: 256 VSALLGRMPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATT 313

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            S LD   VL+R++A  G YP VDPL S S+ L+ +    +  ++   +  ++ R++E +
Sbjct: 314 FSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSAEIVGKEHYEVAREVQEVLQRYKELQ 373

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 374 DIIAILG 380


>gi|161523286|ref|YP_001578298.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|189351941|ref|YP_001947569.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|221202177|ref|ZP_03575212.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M]
 gi|221208762|ref|ZP_03581761.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2]
 gi|221214288|ref|ZP_03587260.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1]
 gi|226740175|sp|A9AJG4|ATPB_BURM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160340715|gb|ABX13801.1| ATP synthase F1, beta subunit [Burkholderia multivorans ATCC 17616]
 gi|189335963|dbj|BAG45033.1| F-type H+-transporting ATPase beta chain [Burkholderia multivorans
           ATCC 17616]
 gi|221165943|gb|EED98417.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1]
 gi|221171394|gb|EEE03842.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2]
 gi|221177971|gb|EEE10383.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M]
          Length = 464

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|51891229|ref|YP_073920.1| F0F1 ATP synthase subunit beta [Symbiobacterium thermophilum IAM
           14863]
 gi|81826265|sp|Q67TB7|ATPB_SYMTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|51854918|dbj|BAD39076.1| ATP synthase beta subunit [Symbiobacterium thermophilum IAM 14863]
          Length = 472

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ IDG   +    +S+ I  + P   N     +   TGI+VID+  P   G
Sbjct: 91  LGRIFNVLGETIDGKGPV-NSPVSLPIHREPPGVANVDPATEMLPTGIKVIDLLCPYARG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYL-GDNLKKS 217
            +IG+F G+G+GK+ ++     +  +      I + VGER RE  +   + +    + K 
Sbjct: 150 GKIGLFGGAGVGKTVMIQELIHNIAYKFGGYSIFAGVGERTREGNDLYHEMIEAGVIDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGLDVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 270 PSAVGYQPTLATEMGYLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++ E+  +P VDPL S SR+ D      E  ++   +  ++ R++E +DI  I G
Sbjct: 328 VLSRAVFEKAIFPAVDPLDSTSRILDPNIVGREHYEVARGVQKVLQRYKELQDIIAILG 386


>gi|308175409|ref|YP_003922114.1| ATP synthase subunit beta, component F1 [Bacillus amyloliquefaciens
           DSM 7]
 gi|307608273|emb|CBI44644.1| ATP synthase (subunit beta, component F1) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555387|gb|AEB25879.1| F0F1 ATP synthase subunit beta [Bacillus amyloliquefaciens TA208]
 gi|328913758|gb|AEB65354.1| ATP synthase (subunit beta, component F1) [Bacillus
           amyloliquefaciens LL3]
          Length = 473

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 160/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG  ID ++ L   D   + + +  P+ ++   E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGDKIDLNEPL-PADAQKDPIHRSAPSFDQLSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    LT +T+AE+F  K G +VL  +D+I RF  +  E++   
Sbjct: 209 KKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDKQGQDVLFFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR LA +    +   +   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|307253313|ref|ZP_07535185.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307264334|ref|ZP_07545922.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|306859177|gb|EFM91218.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306870286|gb|EFN02042.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 467

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +   +I    P    +    +  +TGI+VID+  P   G
Sbjct: 92  LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 151 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 211 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 270

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 271 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 328

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 329 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 386


>gi|287945|emb|CAA50332.1| ATP synthase beta subunit [Drosophila melanogaster]
          Length = 500

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 104 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVV 162

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 163 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 221

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 222 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 281

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 282 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 339

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 340 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 399

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 400 LQDYKSLQDIIAILG 414


>gi|307701971|ref|ZP_07638979.1| ATP synthase F1, beta subunit [Streptococcus mitis NCTC 12261]
 gi|307705146|ref|ZP_07642022.1| ATP synthase F1, beta subunit [Streptococcus mitis SK597]
 gi|307706796|ref|ZP_07643601.1| ATP synthase F1, beta subunit [Streptococcus mitis SK321]
 gi|322376875|ref|ZP_08051368.1| ATP synthase F1, beta subunit [Streptococcus sp. M334]
 gi|307616616|gb|EFN95805.1| ATP synthase F1, beta subunit [Streptococcus mitis NCTC 12261]
 gi|307617881|gb|EFN97043.1| ATP synthase F1, beta subunit [Streptococcus mitis SK321]
 gi|307621307|gb|EFO00368.1| ATP synthase F1, beta subunit [Streptococcus mitis SK597]
 gi|321282682|gb|EFX59689.1| ATP synthase F1, beta subunit [Streptococcus sp. M334]
          Length = 468

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|295107520|emb|CBL05063.1| ATP synthase F1 subcomplex beta subunit [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 482

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+P+DG       +  M I    P         + F+TGI+V+D+  P   G 
Sbjct: 101 GRIWNVIGEPVDGKPMPEVAEW-MPIHHPAPDYDTLTTTTEIFETGIKVVDLIEPYVKGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ ++     +   +     + + VGER RE  + F+E      + K+ 
Sbjct: 160 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLFLEMSESGVIDKTC 219

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 220 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 279

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  E G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 280 AVGYQPTLATEMGDLQERI--TSTETGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 337

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +RS+AE G YP VDPL S SR  D     +E   V+  +  ++  +++ +DI  I G
Sbjct: 338 SRSIAELGIYPAVDPLESTSRALDPEIVGEEHYRVAVGVQEVLQNYKDLQDIIAILG 394


>gi|289168148|ref|YP_003446417.1| proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus
           mitis B6]
 gi|288907715|emb|CBJ22552.1| proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus
           mitis B6]
          Length = 468

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|116334911|ref|YP_802406.1| F0F1 ATP synthase subunit beta [Candidatus Carsonella ruddii PV]
 gi|123126215|sp|Q05FY1|ATPB_CARRP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116235192|dbj|BAF35040.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii
           PV]
          Length = 447

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           C  GR++N LG PID +  +       + +   PP  + Q       +TGI+VID+  P 
Sbjct: 80  CTLGRILNVLGNPIDNNGEIISN--KKKPIHCSPPKFSDQVFSNNILETGIKVIDLLCPF 137

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L
Sbjct: 138 LRGGKIGLFGGAGVGKTINMMELIRNIAIEHKGCSVFIGVGERTREGNDFYYEMKESNVL 197

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  ++    +E    R    LT ++IAE F   G +VLL +D+I RF  +  EI+   G
Sbjct: 198 DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFREMGKDVLLFIDNIYRFTLAGTEISALLG 257

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  S  + G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 258 RMPSAVGYQPTLAEEMGKLQERI--SSTKNGSITSVQAIYVPADDLTDPSPSTTFTHLDS 315

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL+R +AE G YP +DPL S S+  D      E  ++ +S+   + +++E +D   I 
Sbjct: 316 TIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGIEHYEIANSVKFYLQKYKELKDTIAIL 375

Query: 394 G 394
           G
Sbjct: 376 G 376


>gi|289550281|ref|YP_003471185.1| ATP synthase beta chain [Staphylococcus lugdunensis HKU09-01]
 gi|315660259|ref|ZP_07913114.1| ATP synthase F1 sector beta subunit [Staphylococcus lugdunensis
           M23590]
 gi|289179813|gb|ADC87058.1| ATP synthase beta chain [Staphylococcus lugdunensis HKU09-01]
 gi|315494686|gb|EFU83026.1| ATP synthase F1 sector beta subunit [Staphylococcus lugdunensis
           M23590]
          Length = 470

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 164/301 (54%), Gaps = 12/301 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID ++ L    +  + + ++ P  +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGESIDLEEKLDDS-VRRDPIHRLAPKFDELSTEVEILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVIK 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDS 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
              L R L E G YP VDPLAS SR  + +    E   V+  +   + ++ E +DI  I 
Sbjct: 325 TTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYDVARQVQSTLQKYRELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|253987519|ref|YP_003038875.1| F0F1 ATP synthase subunit beta [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253778969|emb|CAQ82129.1| membrane-bound ATP synthase F1 sector beta-subunit [Photorhabdus
           asymbiotica]
          Length = 460

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        ++  +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWPIHRPAPSYEELSNSQELLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|194397468|ref|YP_002038137.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae G54]
 gi|226740681|sp|B5E670|ATPB_STRP4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194357135|gb|ACF55583.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae G54]
          Length = 468

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|34500006|gb|AAQ73585.1| ATP synthase beta subunit [Pasteurella aerogenes]
          Length = 444

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  D +  I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGPIGAED-AWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R   PLT +T+AE F  +G +VL  +D+I R+  ++ E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVPLTGLTMAEKFRDEGRDVLFFVDNIYRYTLAVTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP V P+   SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVGPIRFTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|34500002|gb|AAQ73583.1| ATP synthase beta subunit [Bibersteinia trehalosi]
          Length = 444

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ + +  I    P    +    +  +TGI+VID+  P  
Sbjct: 80  ATLGRIMNVLGEPIDEAGPIGEEE-AWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFA 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +  + S+   VGER RE  +F  +    N L 
Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHRVYSVFAGVGERTREGNDFYHEMKDSNVLD 198

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G 
Sbjct: 199 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 258

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 259 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDST 316

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 317 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQDTLQRYKELKDIIAILG 376


>gi|322835102|ref|YP_004215129.1| ATP synthase F1 subunit beta [Rahnella sp. Y9602]
 gi|321170303|gb|ADW76002.1| ATP synthase F1, beta subunit [Rahnella sp. Y9602]
          Length = 460

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID   ++G+ +    I    P        ++  +TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVLGEPIDMKGAIGEEE-RRAIHRAAPSYEELANSQELLETGIKVMDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|78356032|ref|YP_387481.1| F0F1 ATP synthase subunit beta [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|118573527|sp|Q313W0|ATPB_DESDG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78218437|gb|ABB37786.1| ATP synthase F1 subcomplex beta subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 470

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 162/304 (53%), Gaps = 13/304 (4%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVE-KGFKTGIRVIDIFT 156
           +   GR++N +G+P+D    +G  D +  +    P P  N Q    +  +TGI+V+D+  
Sbjct: 87  SASLGRIMNVVGRPVD---EMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLI 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G ++G+F G+G+GK+ +L     +       IS+   VGER RE  +   +     
Sbjct: 144 PFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            L+K+ +V    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++ 
Sbjct: 204 VLEKAALVYGQMNEPPGARARVALTALACAEYFRDEENQDVLLFVDNIFRFTQAGSEVSA 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 264 LLGRMPSAVGYQPTLGTDLGGLQERI--TSTTKGSITSVQAVYVPADDLTDPAPATTFSH 321

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LDG +VL+R +AE G YP VDPL S SR+ D     A+   +   +  ++ ++++ +DI 
Sbjct: 322 LDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEHYSVAREVQMVLQKYKDLQDII 381

Query: 391 LIGG 394
            I G
Sbjct: 382 AILG 385


>gi|187920253|ref|YP_001889284.1| F0F1 ATP synthase subunit beta [Burkholderia phytofirmans PsJN]
 gi|187718691|gb|ACD19914.1| ATP synthase F1, beta subunit [Burkholderia phytofirmans PsJN]
          Length = 492

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 153/295 (51%), Gaps = 12/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  G P D   +L        I    PP   +      F TGI+VID+  PL  G 
Sbjct: 102 GRLLDVTGSPRDDGAALSAQLERRPIHRAAPPLAAQTGATSLFSTGIKVIDLLAPLAQGG 161

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           +  +F G+G+GK+ L+     +M  R       + + VGER RE  E + D      L +
Sbjct: 162 KAAMFGGAGVGKTVLVMELIHAMVERYKGIS--VFAGVGERSREGHEMLLDMRTSGVLAR 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R   P TA+TIAEYF   +  NVLL++D++ RF  +  E++   G 
Sbjct: 220 TVLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGR 279

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ SE+  L ERI        ++TA+ +V V  D+  DP   ++ + +D  
Sbjct: 280 MPSRVGYQPTLASEVASLQERI--VSVGDVSVTAIEAVYVPADDFTDPAVTAIAAHIDSM 337

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
           +VL+R++A EG YP +DP+AS S L D     +E   V++ +  +I  + E +D+
Sbjct: 338 VVLSRAMAAEGMYPAIDPIASSSILLDPLVVGEEHVAVATEVRRIIEHYRELQDV 392


>gi|327441428|dbj|BAK17793.1| F0F1-type ATP synthase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 471

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 169/330 (51%), Gaps = 15/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID  + +        I  + P         +  +TGI+V+D+  P  
Sbjct: 88  ATLGRVFNVLGEVIDLGEEIPAEVRRDSIHREAPTFDELSTTVEILETGIKVVDLLAPYI 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +K
Sbjct: 148 KGGKIGLFGGAGVGKTVLIQELINNIAQEHAGISVFAGVGERTREGNDLFFEMTDSGVIK 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AE+F   +G +VLL +D+I RF  +  E++   G
Sbjct: 208 QTAMVFGQMNEPPGARMRVALTGLTMAEFFRDEQGADVLLFIDNIFRFTQAGSEVSALLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +   KG++T++ ++ V  D++ DP   +  + LD 
Sbjct: 268 RMPSAVGYQPTLATEMGKLQERI--TSTTKGSVTSIQAIYVPADDYTDPAPATTFAHLDA 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   + + +   I R+ E +DI  I 
Sbjct: 326 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGPEHYAIATGVQRTIQRYRELQDIIAI- 384

Query: 394 GYRPGVDLILD---KAVHQVPIIYDFLKQS 420
               G+D + D   K V +   I  FL Q+
Sbjct: 385 ---LGMDELGDEDKKTVERARRIQFFLSQN 411


>gi|21675043|ref|NP_663108.1| F0F1 ATP synthase subunit beta [Chlorobium tepidum TLS]
 gi|25452812|sp|Q8KAC9|ATPB2_CHLTE RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|21648279|gb|AAM73450.1| ATP synthase F1, beta subunit [Chlorobium tepidum TLS]
          Length = 462

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PIDG   +     +  I    P         + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGDPIDGKGPV-PAKKTYSIHRAAPKFDELSTKTEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +    + + VGER RE  +   + +    + K+
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT ++IAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFREEEGRDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI  +  +KG++T+V ++ V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLSTEMGELQDRI--TSTKKGSVTSVQAIYVPADDLTDPAPATAFTHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     D+      ++  ++ R+++ +DI  I G
Sbjct: 323 VLSRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILG 381


>gi|34763442|ref|ZP_00144389.1| ATP synthase beta chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742368|ref|ZP_04572849.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13]
 gi|256845696|ref|ZP_05551154.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_36A2]
 gi|294785057|ref|ZP_06750345.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_27]
 gi|27886883|gb|EAA24008.1| ATP synthase beta chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229430016|gb|EEO40228.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13]
 gi|256719255|gb|EEU32810.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_36A2]
 gi|294486771|gb|EFG34133.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_27]
          Length = 462

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +   +  + I  + P   + +   + F+TGI+VID+  P  
Sbjct: 82  AVLGRILNVLGEPVDNQGPI-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE R+   +      + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   G
Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD 
Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R++A  G YP VDPL S S+ L++     +  ++   +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|330718988|ref|ZP_08313588.1| F0F1 ATP synthase subunit beta [Leuconostoc fallax KCTC 3537]
          Length = 466

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 8/296 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG P+D    +  G     I  + P         +  +TGI+VID+  P  
Sbjct: 85  ATLGRVFNVLGNPVDNAGDIDAGVKRNPIHREAPQYDELTTSTEILETGIKVIDLLAPYV 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      L 
Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMKESGVLA 204

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R    LT +T+AE F  ++G +VLL +D+I RF  +  E++   G
Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
              L R+L ++G YP VDPLAS S   D      E  ++ + +   + R+ E +DI
Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDI 378


>gi|116512623|ref|YP_811530.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123125393|sp|Q02XA5|ATPB_LACLS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116108277|gb|ABJ73417.1| ATP synthase F1 subcomplex beta subunit [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 469

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  IDG +          I  K P         +   TGI+V+D+  P   G
Sbjct: 90  LGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 150 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 270 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V+  +  ++ R++E +DI  I G
Sbjct: 328 NLERRLTQMGIYPAVDPLASSSRAITPEIVGEEHYEVAMEVQRVLQRYKELQDIIAILG 386


>gi|257438169|ref|ZP_05613924.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
 gi|257199368|gb|EEU97652.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
          Length = 464

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 158/305 (51%), Gaps = 10/305 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GRV N LG+P+D +      +    I    P    +Q   +  +TGI+V+D+ 
Sbjct: 82  PVGDQCLGRVFNLLGEPVD-NKPAPTPEAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +    
Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++
Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A +G YP VDPL S SR L+ +    +  ++   +  ++ R++E +DI
Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARDVQKVLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAIMG 383


>gi|112791386|gb|ABI21963.1| ATP synthase beta subunit [Samsonia erythrinae]
          Length = 421

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|254302779|ref|ZP_04970137.1| F-type two-sector ATPase, F(1) beta subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322971|gb|EDK88221.1| F-type two-sector ATPase, F(1) beta subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 462

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +   +  + I  + P   + +   + F+TGI+VID+  P  
Sbjct: 82  AVLGRILNVLGEPVDNQGPI-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE R+   +      + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   G
Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD 
Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R++A  G YP VDPL S S+ L++     +  ++   +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|284007073|emb|CBA72348.1| F0F1 ATP synthase subunit beta [Arsenophonus nasoniae]
          Length = 460

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PID    +G+ +    I    P   +     +  +TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVLGDPIDMKGEIGEEE-RWAIHRAAPSYEDLSNSTELLETGIKVMDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKAGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|257462636|ref|ZP_05627046.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. D12]
 gi|317060283|ref|ZP_07924768.1| ATP synthase subunit beta [Fusobacterium sp. D12]
 gi|313685959|gb|EFS22794.1| ATP synthase subunit beta [Fusobacterium sp. D12]
          Length = 465

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 17/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KG +  E    I  + P    ++ V + F+TGI+VID+ 
Sbjct: 82  AVLGRILNVLGEPVDE-----KGPIETEEYLPIHREAPKFEEQETVTEIFETGIKVIDLL 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G + G+F G+G+GK+ L+     +       IS+   VGER RE R+   +    
Sbjct: 137 APYIKGGKTGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTES 196

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
             L K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++
Sbjct: 197 GVLNKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSEVS 256

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S
Sbjct: 257 ALLGRIPSAVGYQPNLATEMGSLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFS 314

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A  G YP VDPL S S+ L+ +    +  ++   +  ++ R+ E +DI
Sbjct: 315 HLDATTVLSRDIAALGIYPAVDPLDSTSKALSPEVVGREHYEVAREVQRVLQRYTELQDI 374

Query: 390 RLIGG 394
             I G
Sbjct: 375 IAILG 379


>gi|167840619|ref|ZP_02467303.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43]
          Length = 366

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 143/265 (53%), Gaps = 12/265 (4%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCF 187
           PP   ++     F TGI+VID+  PL  G +  +F G+G+GK+ L+     +M  R    
Sbjct: 11  PPLAEQKSATALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGI 70

Query: 188 DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245
              + + +GER RE  E + D  G   L ++V+V    +E P  R   PLTA+ IAEYF 
Sbjct: 71  S--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFR 128

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +  NVLL++D++ RF  +  E++   G LP   GY  ++ SE+  L ERI  +  E  
Sbjct: 129 DERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGA 186

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
            +TA+ +V V  D+  DP   ++ + +D  +VL+R++A EG YP +DP+AS S L D   
Sbjct: 187 AVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLV 246

Query: 366 SADEKKLVS-SLTHLIHRFEETRDI 389
             D    V+  +  +I  + E +D+
Sbjct: 247 VGDGHVEVAIEVRRVIEHYRELQDV 271


>gi|258544335|ref|ZP_05704569.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC
           15826]
 gi|258520415|gb|EEV89274.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC
           15826]
          Length = 459

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LGK ID    + + +    I  K P         +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMNVLGKEIDHGPKI-EAEAYWGIHRKAPAYDELANSTELLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYYEMKESNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E    R    LT +T+AEYF  +G +VL  +D+I R+  +  E++   G 
Sbjct: 200 KVSLVYGQMNEPAGNRFRVALTGLTMAEYFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +AE G YP VDPL S SR  D     DE  +    +  ++ R++E RDI  I G
Sbjct: 318 VVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGDEHYETARRVQGVLQRYKELRDIIAILG 377


>gi|205375345|ref|ZP_03228135.1| F0F1 ATP synthase subunit beta [Bacillus coahuilensis m4-4]
          Length = 470

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 15/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D  +  G     I    P         +  +TGI+V+D+  P  
Sbjct: 87  VTLGRVFNVLGETIDLDAPIEAGARRDPIHRTAPKFDQLSTETEILETGIKVVDLLAPYI 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   +      +K
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSVFAGVGERTREGNDLFHEMTDSGVIK 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +++ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATDMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + R++E +DI  I 
Sbjct: 325 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSIARQVQSTLQRYKELQDIIAI- 383

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + D     VH+   +  FL Q+
Sbjct: 384 ---LGMDELSDDDKLVVHRARRVQFFLSQN 410


>gi|53804131|ref|YP_114011.1| F0F1 ATP synthase subunit beta [Methylococcus capsulatus str. Bath]
 gi|53757892|gb|AAU92183.1| ATP synthase F1, beta subunit [Methylococcus capsulatus str. Bath]
          Length = 458

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 188/398 (47%), Gaps = 29/398 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ+    +  +AE +   +V+    +  +    Y+      Y+    F VHQ        
Sbjct: 1   MQERAPVIGSIAEVHGPVVVIACQTLPPLRQALYSRIDHETYL----FEVHQ-------- 48

Query: 61  QVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDD 117
                +LD  ++  V +     L  G +V   G     P +  C GR++N  G+P+D   
Sbjct: 49  -----HLDESHVRAVTLHRTTGLKRGMVVHDLGAPLQVPVSTACLGRLVNLFGEPLDNGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +         P A +R   E   +TGI+VID+  P   G + G+F G+G+GK+ L
Sbjct: 104 PLPDSEYRDAHRPPAPLAESRAAGET-LETGIKVIDLLCPFARGGKTGLFGGAGVGKTVL 162

Query: 178 LS--MFARSDCFDKV-IISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKM 233
           +   M A S     V + + VGER RE  E   +      L KS++V    DESP +R  
Sbjct: 163 IMEFMHAVSALHRGVSVFAGVGERIREGHELWRELAEAGVLDKSLLVYGQMDESPGVRFR 222

Query: 234 APLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LTA+T AEY   +    VL ++D++ RF  +  EI++  G +P   GY  ++ +E+  
Sbjct: 223 VGLTALTYAEYLRDTLHTEVLFLIDNVFRFVQAGSEISSLLGRMPATVGYQPTLATEVAE 282

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +    G IT+V +V V  D+  DP   ++ S LD  +VL+R  A +G YP +D
Sbjct: 283 IEERI--TSTAAGAITSVQAVYVPADDMTDPAVAAILSHLDTTVVLSRVQAGKGIYPAID 340

Query: 353 PLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           PLAS SRL D+    D    +   +   + R+ E  DI
Sbjct: 341 PLASTSRLMDRHVIGDRHYGIAQGVREHLARYRELEDI 378


>gi|165977082|ref|YP_001652675.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|226739969|sp|B0BRX2|ATPB_ACTPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|165877183|gb|ABY70231.1| ATP synthase beta chain [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 457

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +   +I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|293393689|ref|ZP_06637998.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582]
 gi|291423811|gb|EFE97031.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582]
          Length = 460

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P        +   +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQDLLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|146337564|ref|YP_001202612.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. ORS278]
 gi|166201693|sp|A4YKE0|ATPB_BRASO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146190370|emb|CAL74366.1| ATP synthase subunit beta, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS278]
          Length = 480

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 19/317 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR+IN +G+PID    + K D    I  + P   ++    +   TGI+V+D
Sbjct: 81  RVPVGEGTLGRIINVIGEPIDEAGPV-KADNVRAIHQEAPTYTDQSTEAEILVTGIKVVD 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      EFI
Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199

Query: 207 EDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           E  +  +          K  +V    +E P  R    LT +TIAE F  KG +VL  +D+
Sbjct: 200 ESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDN 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D
Sbjct: 260 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPAD 317

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377
           +  DP   +  + LD    L+RS+AE+G YP VDPL S SR+       +E   V+  + 
Sbjct: 318 DLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPLVVGEEHYAVARQVQ 377

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ R++  +DI  I G
Sbjct: 378 QVLQRYKALQDIIAILG 394


>gi|210617049|ref|ZP_03291384.1| hypothetical protein CLONEX_03606 [Clostridium nexile DSM 1787]
 gi|210149572|gb|EEA80581.1| hypothetical protein CLONEX_03606 [Clostridium nexile DSM 1787]
          Length = 463

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 157/293 (53%), Gaps = 9/293 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  IDG +SL + +    I    P    +  V +  +TGI+VID+  P   G 
Sbjct: 86  GRLFNVLGDTIDGGESL-ENEEHWVIHRDAPTFEEQSPVVEILETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      L K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLDKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGSRMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFVQAGSEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLANEVGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R + E+G YP VDPL S SR+ +     +E  ++  ++  ++ +++E +DI
Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEADVVGEEHYEVARNVQAILQKYKELQDI 375


>gi|33151292|ref|NP_872645.1| F0F1 ATP synthase subunit beta [Haemophilus ducreyi 35000HP]
 gi|81836085|sp|Q7VPP0|ATPB_HAEDU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33147512|gb|AAP95034.1| ATP synthase beta chain [Haemophilus ducreyi 35000HP]
          Length = 457

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +   +I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|13272348|gb|AAK17111.1|AF291051_8 ATP synthase beta subunit [Candidatus Carsonella ruddii]
          Length = 447

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 154/295 (52%), Gaps = 10/295 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           C  GR++N LG PID +  +       + +   PP  + Q       +TGI+VID+  P 
Sbjct: 80  CTLGRILNVLGNPIDNNGEIISN--KKKPIHCSPPKFSDQVFSNNILETGIKVIDLLCPF 137

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L
Sbjct: 138 LRGGKIGLFGGAGVGKTINMMELIRNIAIEHKGCSVFIGVGERTREGNDFYYEMKESNVL 197

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  ++    +E    R    LT ++IAE F   G +VLL +D+I RF  +  EI+   G
Sbjct: 198 DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFREMGKDVLLFIDNIYRFTLAGTEISALLG 257

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  S  + G+IT+V ++ V  D+  DP   +  + LD 
Sbjct: 258 RMPSAVGYQPTLAEEMGKLQERI--SSTKNGSITSVQAIYVPADDLTDPSPSTTFTHLDS 315

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
            IVL+R +AE G YP +DPL S S+  D      E  ++ +S+   + +++E +D
Sbjct: 316 TIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGIEHYEIANSVKFYLQKYKELKD 370


>gi|325295434|ref|YP_004281948.1| ATP synthase subunit beta [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065882|gb|ADY73889.1| ATP synthase subunit beta [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 481

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+PID    + + +    I    PP   ++   + F+TGI+VID+  P   G 
Sbjct: 98  GRIFNVVGEPIDEQGPV-EAEEYWPIHRPTPPLTEQKSTAEIFETGIKVIDLLEPYAKGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ LL     +         + + VGER RE  + ++E      L  +V
Sbjct: 157 KTGLFGGAGVGKTVLLMELIHNVAMKHGGFSVFAGVGERTREGTDLWLEMKESGVLPNTV 216

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    +T VT+AEYF   +G +VL  +D++ RF  +  E++   G +P
Sbjct: 217 LVYGQMNEPPGNRWRVAMTGVTMAEYFRDVEGRDVLFFVDNMFRFIQAGSEVSALLGRIP 276

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +E+  + ERI  +   KG+IT+V ++ V  D+  DP   ++ + LD   V
Sbjct: 277 SEVGYQPTLSTEVGAIQERI--TSTNKGSITSVQAIYVPADDFTDPAPFTLFAHLDATTV 334

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R+LAE+G YP VDPL S SR+ D     +   ++   +   + R++E  +I  I G
Sbjct: 335 LSRALAEQGIYPAVDPLESTSRMLDPQIVGERHYRVAREVQRYLQRYKELLEIIAILG 392


>gi|148252015|ref|YP_001236600.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. BTAi1]
 gi|190358204|sp|A5E950|ATPB1_BRASB RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|146404188|gb|ABQ32694.1| ATP synthase F1 subcomplex beta subunit [Bradyrhizobium sp. BTAi1]
          Length = 480

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 19/317 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR+IN +G+PID    + K D    I  + P   ++    +   TGI+V+D
Sbjct: 81  RVPVGEGTLGRIINVIGEPIDEAGPV-KADSLRAIHQEAPSYTDQSTEAEILVTGIKVVD 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      EFI
Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199

Query: 207 EDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           E  +  +          K  +V    +E P  R    LT +TIAE F  KG +VL  +D+
Sbjct: 200 ESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDN 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D
Sbjct: 260 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPAD 317

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377
           +  DP   +  + LD    L+RS+AE+G YP VDPL S SR+       +E   V+  + 
Sbjct: 318 DLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPLVVGEEHYAVARQVQ 377

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ R++  +DI  I G
Sbjct: 378 QVLQRYKALQDIIAILG 394


>gi|294783123|ref|ZP_06748447.1| ATP synthase F1, beta subunit [Fusobacterium sp. 1_1_41FAA]
 gi|294480001|gb|EFG27778.1| ATP synthase F1, beta subunit [Fusobacterium sp. 1_1_41FAA]
          Length = 462

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +   +  + I  + P   + +   + F+TGI+VID+  P  
Sbjct: 82  AVLGRILNVLGEPVDNQGPV-NAETVLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +       IS+   VGER RE R+   +      + 
Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTESGVIT 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   G
Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD 
Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             VL+R++A  G YP VDPL S S+ L++     +  ++   +  ++ R++E +DI  I 
Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGREHYEIARKVQEVLQRYKELQDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|268593514|ref|ZP_06127735.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131]
 gi|291310937|gb|EFE51390.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131]
          Length = 460

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P         +  +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGQPIDM-----KGDIGEEERWSIHRAAPSYEELANSTELLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|148827675|ref|YP_001292428.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG]
 gi|166201710|sp|A5UGY9|ATPB_HAEIG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148718917|gb|ABR00045.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG]
          Length = 457

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID   ++G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIVNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|94263072|ref|ZP_01286891.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1]
 gi|93456615|gb|EAT06723.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1]
          Length = 473

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 160/300 (53%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
           GR++N +G+ +DG   +GK +   M  + K  P    Q  E    +TGI+VID+  P   
Sbjct: 94  GRIMNVVGRSVDG---MGKIESDKMRPIHKPAPLFTEQDTEVHVLETGIKVIDLLVPFPR 150

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G GK+ ++     +       IS+   VGER RE  +   +      L K
Sbjct: 151 GGKMGLFGGAGCGKTVIMMEMVNNIAMHHGGISVFCGVGERTREGNDLYHEMKESGVLPK 210

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V     E P  R    LT ++ AEYF   +G +VLL +D+I RF  + +E++   G 
Sbjct: 211 AALVYGQMTEPPGARSRVALTGLSAAEYFRDEEGQDVLLFVDNIFRFTQAGQEVSALLGR 270

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ ++L  L ERI  +   KG+ITAV  V V  D+  DP   +  + LDG 
Sbjct: 271 IPSAVGYQPTLGTDLGGLQERI--TSTNKGSITAVQCVYVPADDLTDPAPATTFAHLDGT 328

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           +VL+R +AE G YP VDPL S SR+ D     ++  LV+    + + ++++ +DI  I G
Sbjct: 329 VVLSRQIAELGIYPAVDPLDSTSRILDPNVLGEDHYLVARGVQMTLQKYKDLQDIIAILG 388


>gi|315650482|ref|ZP_07903552.1| ATP synthase F1 sector beta subunit [Eubacterium saburreum DSM
           3986]
 gi|315487278|gb|EFU77590.1| ATP synthase F1 sector beta subunit [Eubacterium saburreum DSM
           3986]
          Length = 463

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 9/294 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID  +   K +  + I  K P    +    +  +TGI+V+D+  P   G
Sbjct: 88  LGRIFNVLGEVIDKKEP-PKVEEYLPIHRKAPSFEEQSTQTEILETGIKVVDLLCPYQKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMTESGVINKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  KG  +VLL +D+I RF  +  E++   G +
Sbjct: 207 TMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+RS+ E G YP VDPL S SR+       +E  ++   +  ++ +++E +DI
Sbjct: 325 VLDRSIVEMGIYPAVDPLGSTSRILSPHVVGEEHYEVAQRVQEVLQKYKELQDI 378


>gi|300721114|ref|YP_003710382.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297627599|emb|CBJ88118.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 460

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PID    +G+ +    I    P        ++  +TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVLGDPIDMKGEIGEEE-RWSIHRTAPTYEELSNSQELLETGIKVMDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|282861130|ref|ZP_06270195.1| ATP synthase F1, beta subunit [Streptomyces sp. ACTE]
 gi|282563788|gb|EFB69325.1| ATP synthase F1, beta subunit [Streptomyces sp. ACTE]
          Length = 480

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 101 GKVFNTLGQILNEPEAESQVTERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R +   D V + + VGER RE  + I++      L K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTESGVLDKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++E+G YP VDPL S SR+ D  + S D     S +  ++ ++++ +DI  I G
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYDAASRVKGILQKYKDLQDIIAILG 396


>gi|195064082|ref|XP_001996493.1| GH23965 [Drosophila grimshawi]
 gi|193892039|gb|EDV90905.1| GH23965 [Drosophila grimshawi]
          Length = 506

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSVEQEILVTGIKVV 168

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 406 LQDYKSLQDIIAILG 420


>gi|461565|sp|P35110|ATPB_CHLLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|299279|gb|AAB25774.1| F-ATPase beta subunit [Chlorobium limicola]
          Length = 462

 Score =  145 bits (367), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR++N +G PIDG     KG +    S  I    P         + F+TGI+VID+  P
Sbjct: 86  LGRMLNVVGDPIDG-----KGPVLSKKSYSIHRTAPKFDELSTKAEMFETGIKVIDLLEP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G + G+F G+G+GK+ L+     +   ++   S+   VGER RE  +   + +    
Sbjct: 141 YSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGFSVFAGVGERTREGNDLWHEMMESGV 200

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           + K+ +V    +E P  R    LT ++IAEYF   +G +VLL +D+I RF  +  E++  
Sbjct: 201 IDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEGRDVLLFIDNIFRFTQAGSEVSAL 260

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L +RI  +  +KG++T+V ++ V  D+  DP   +  + L
Sbjct: 261 LGRMPSAVGYQPTLSTEMGELQDRI--TSTKKGSVTSVQAIYVPADDLTDPAPATAFTHL 318

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R +AE G YP VDPL S SR+ D     D+      ++  ++ R+++ +DI  
Sbjct: 319 DATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGDDHYDTAQAVKQILQRYKDLQDIIA 378

Query: 392 IGG 394
           I G
Sbjct: 379 ILG 381


>gi|324995411|gb|EGC27323.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK678]
          Length = 468

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDTPFPADAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|53728944|ref|ZP_00134548.2| COG0055: F0F1-type ATP synthase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209110|ref|YP_001054335.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           L20]
 gi|190150977|ref|YP_001969502.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|303249889|ref|ZP_07336091.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307246571|ref|ZP_07528642.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307250941|ref|ZP_07532867.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307255556|ref|ZP_07537361.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307260007|ref|ZP_07541719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307262135|ref|ZP_07543786.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|322513163|ref|ZP_08066294.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC
           25976]
 gi|166201686|sp|A3N2U4|ATPB_ACTP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739968|sp|B3H2P3|ATPB_ACTP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|126097902|gb|ABN74730.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|189916108|gb|ACE62360.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|302650952|gb|EFL81106.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306852443|gb|EFM84677.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306856969|gb|EFM89099.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306861405|gb|EFM93394.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306865843|gb|EFM97719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868112|gb|EFM99937.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|322121059|gb|EFX92883.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC
           25976]
          Length = 457

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +   +I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|15600747|ref|NP_254241.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAO1]
 gi|107104656|ref|ZP_01368574.1| hypothetical protein PaerPA_01005735 [Pseudomonas aeruginosa PACS2]
 gi|116053705|ref|YP_794032.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152987192|ref|YP_001351667.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PA7]
 gi|218894657|ref|YP_002443527.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa LESB58]
 gi|296392421|ref|ZP_06881896.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAb1]
 gi|313111495|ref|ZP_07797296.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016]
 gi|81539357|sp|Q9HT20|ATPB_PSEAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122256275|sp|Q02DF4|ATPB_PSEAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990372|sp|A6VF32|ATPB_PSEA7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740662|sp|B7V791|ATPB_PSEA8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|9951894|gb|AAG08939.1|AE004967_10 ATP synthase beta chain [Pseudomonas aeruginosa PAO1]
 gi|115588926|gb|ABJ14941.1| ATP synthase beta chain [Pseudomonas aeruginosa UCBPP-PA14]
 gi|150962350|gb|ABR84375.1| ATP synthase F1, beta subunit [Pseudomonas aeruginosa PA7]
 gi|218774886|emb|CAW30704.1| ATP synthase beta chain [Pseudomonas aeruginosa LESB58]
 gi|310883798|gb|EFQ42392.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016]
          Length = 458

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +    I  + P   ++    +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEAGPIGE-EERWGIHREAPSYADQAGGNELLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      D       + +++ R++E +DI  I G
Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQDHYDTARGVQYVLQRYKELKDIIAILG 377


>gi|302755124|ref|XP_002960986.1| hypothetical protein SELMODRAFT_139657 [Selaginella moellendorffii]
 gi|300171925|gb|EFJ38525.1| hypothetical protein SELMODRAFT_139657 [Selaginella moellendorffii]
          Length = 427

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 23/312 (7%)

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           C  GR++N +G+PID  GD      D  + I  + P    +   ++   TGI+V+D+  P
Sbjct: 34  CTLGRIMNVIGEPIDEIGDFVT---DHYLPIHREAPVFTEQSTEQEVLVTGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     +E IE  
Sbjct: 91  YQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYKEMIESG 149

Query: 209 --YLGD--NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
              LGD  N  K  +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF 
Sbjct: 150 VIKLGDKQNESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFT 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP
Sbjct: 210 QANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R ++E G YP VDPL S SR L+ +    D  +    +  ++  
Sbjct: 268 APATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPRVIGEDHYQCARDVQKVLQS 327

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 328 YKNLQDIIAILG 339


>gi|291280259|ref|YP_003497094.1| F0F1-type ATP synthase subunit beta [Deferribacter desulfuricans
           SSM1]
 gi|290754961|dbj|BAI81338.1| F0F1-type ATP synthase, beta subunit [Deferribacter desulfuricans
           SSM1]
          Length = 468

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    + + D    I    P   +++   +  +TGI+VID+  P   G 
Sbjct: 89  GRILNVVGEPVDERGEV-QADDYWPIHRPAPKLEDQETGYEILETGIKVIDLLEPYTKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ L+     +        S+   VGER RE  + ++E      L K  
Sbjct: 148 KTGLFGGAGVGKTVLIMELINNIAKQHGGYSVFCGVGERTREGNDLWLEMQEAGVLDKVA 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++    +E P  R    LT +TIAEYF   +G +VLL +D+I RF+ +  E++   G +P
Sbjct: 208 LIYGQMNEPPGARMRVGLTGLTIAEYFRDVEGQDVLLFVDNIFRFSQAGSEVSALLGRMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 268 SAVGYQPTLGTEMGELQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR+ D     +E   V+  +  ++ R++E +DI  I G
Sbjct: 326 LSRQIAELGIYPAVDPLDSTSRILDPNIVGEEHYSVARGVQAVLQRYKELQDIIAILG 383


>gi|227823626|ref|YP_002827599.1| F0F1 ATP synthase subunit beta [Sinorhizobium fredii NGR234]
 gi|254808160|sp|C3M9S1|ATPB_RHISN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|227342628|gb|ACP26846.1| ATP synthase F1, beta subunit [Sinorhizobium fredii NGR234]
          Length = 505

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 19/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N +G+P+D    +     S   + +  PA   Q  E     TGI+V+D+  P   
Sbjct: 118 LGRIMNVIGEPVDEAGPVETS--SRRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAK 175

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---- 208
           G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     
Sbjct: 176 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNK 234

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           + G    K+ +V    +E P  R    LT +TIAE+F  +G +VL  +D+I RF  +  E
Sbjct: 235 HGGGEGSKAALVYGQMNEPPGARARVALTGLTIAEHFRDEGQDVLFFVDNIFRFTQAGSE 294

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP   + 
Sbjct: 295 VSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATS 352

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   VS  +   + R++  +
Sbjct: 353 FAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVSRKVQSTLQRYKALQ 412

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 413 DIIAILG 419


>gi|34500026|gb|AAQ73595.1| ATP synthase beta subunit [Actinobacillus rossii]
          Length = 445

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 156/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G  + +  I    P    +    +  +TGI+VID+  P   G 
Sbjct: 84  GRIMNVLGEPIDQKGEIG-AEENWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K  
Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVLDKVS 202

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 320

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 321 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 377


>gi|239586335|gb|ACR83542.1| ATP synthase beta subunit [Pectobacterium carotovorum]
          Length = 421

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PID    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGDPIDMKGEIGEEE-RWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|112791384|gb|ABI21962.1| ATP synthase beta subunit [Pectobacterium carotovorum subsp.
           odoriferum]
          Length = 421

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|261367325|ref|ZP_05980208.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
 gi|282570083|gb|EFB75618.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
          Length = 464

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 161/299 (53%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N LG+P+D  +     ++    + +  PA + Q       +TGI+V+D+  P   G
Sbjct: 89  GRVFNLLGEPVD--EKPAPENMERWPIHRAAPAFDEQESSTEILETGIKVVDLICPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+   ++  +   +   + + VGER RE  +   +      L K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIYNIATAHNGYSVFTGVGERTREGNDLYGEMQESGVLNKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 207 ALVYGQMNEPPGARMRVALSGLTMAEYFRDVKHQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTQKGSITSVQAVYVPADDLTDPAPATTFTHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +A +G YP VDPL S SR L+ +    +  K   ++  ++ R+++ +DI  I G
Sbjct: 325 VLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYKTARAVQQVLQRYKDLQDIIAIMG 383


>gi|240145788|ref|ZP_04744389.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|257202121|gb|EEV00406.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|291534350|emb|CBL07462.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           M50/1]
 gi|291541181|emb|CBL14292.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           XB6B4]
          Length = 468

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  +DG  +L +G+    I    P   ++  V +  +TGI+VID+  P   G 
Sbjct: 86  GRLFNVLGDTLDGGKTL-EGEKHWCIHRDPPSFEDQSPVVEVLETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   +      L+K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGSEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R + E+G YP VDPL S SR+ ++     E  +    +  ++ ++ E +DI  I G
Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETARRVQEILQKYTELQDIIAILG 380


>gi|223043982|ref|ZP_03614023.1| ATP synthase F1, beta subunit [Staphylococcus capitis SK14]
 gi|314934172|ref|ZP_07841533.1| ATP synthase F1, beta subunit [Staphylococcus caprae C87]
 gi|222442697|gb|EEE48801.1| ATP synthase F1, beta subunit [Staphylococcus capitis SK14]
 gi|313653077|gb|EFS16838.1| ATP synthase F1, beta subunit [Staphylococcus caprae C87]
          Length = 470

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D+ +        I  + P         +  +TGI+V+D+  P  
Sbjct: 87  ATLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  S   KG++T++ +V V  D++ DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR L       D   +   +   + ++ E +DI  I
Sbjct: 324 ATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQDHYDVAREVQSTLQKYRELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|56808123|ref|ZP_00365911.1| COG0055: F0F1-type ATP synthase, beta subunit [Streptococcus
           pyogenes M49 591]
          Length = 403

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 12/313 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVESQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGGY 395
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I   
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAI--- 383

Query: 396 RPGVDLILDKAVH 408
             G+D + D+  H
Sbjct: 384 -LGMDELSDEEKH 395


>gi|114330304|ref|YP_746526.1| F0F1 ATP synthase subunit beta [Nitrosomonas eutropha C91]
 gi|122314650|sp|Q0AJB0|ATPB1_NITEC RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|114307318|gb|ABI58561.1| ATP synthase F1 subcomplex beta subunit [Nitrosomonas eutropha C91]
          Length = 460

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G     M I    P         +  +TGI+VID+  P   G
Sbjct: 84  LGRIMDVLGRPIDEMGEIGAESF-MPIHRTAPAFDELSASTELLETGIKVIDLICPFAKG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 143 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 202

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 203 ALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 262

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  S  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 263 SAVGYQPTLAEEMGRLQERITSS--KTGSITSIQAVYVPADDLTDPSPATTFGHLDATVV 320

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      D       +   + R++E RDI  I G
Sbjct: 321 LSRDIASLGIYPAVDPLDSTSRQLDPLVVGEDHYNTAREVQQTLQRYKELRDIIAILG 378


>gi|112791376|gb|ABI21958.1| ATP synthase beta subunit [Pectobacterium atrosepticum]
 gi|112791378|gb|ABI21959.1| ATP synthase beta subunit [Pectobacterium betavasculorum]
          Length = 421

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|167584000|ref|ZP_02376388.1| type III secretion system ATPase [Burkholderia ubonensis Bu]
          Length = 268

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/205 (43%), Positives = 123/205 (60%), Gaps = 3/205 (1%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L
Sbjct: 65  EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGLGPL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL 
Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDAPLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           MFAR    D  +I+L+GERGREVREF+E  +G D + +SVVV ATSD S I R  A   A
Sbjct: 184 MFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243

Query: 239 VTIAEYFSSKGDNVLLILDSITRFA 263
             IAEYF  +G  VLL++DS+TRFA
Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFA 268


>gi|227327856|ref|ZP_03831880.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 460

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|172059172|ref|YP_001806824.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria MC40-6]
 gi|226739982|sp|B1YQL4|ATPB_BURA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|171991689|gb|ACB62608.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MC40-6]
          Length = 464

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|320008536|gb|ADW03386.1| ATP synthase F1, beta subunit [Streptomyces flavogriseus ATCC
           33331]
          Length = 480

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 101 GKVFNTLGQILNEPEAEAQITERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R +   D V + + VGER RE  + I++      L K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTDSGVLDKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++E+G YP VDPL S SR+ D  + A D     S +  ++ ++++ +DI  I G
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYDTASRVKGILQKYKDLQDIIAILG 396


>gi|112791382|gb|ABI21961.1| ATP synthase beta subunit [Pectobacterium carotovorum]
          Length = 421

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|90421698|ref|YP_530068.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisB18]
 gi|118573734|sp|Q21CY7|ATPB_RHOPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|90103712|gb|ABD85749.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisB18]
          Length = 476

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +    L   I ++ P   ++    +   TGI+V+D+  P   G 
Sbjct: 90  GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211
           +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +    G
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    L+ +T+AE+F  +G +VL  +D+I RF  +  E++ 
Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390
           LD   VLNR+++E+G YP VDPL S SR+       DE    + +   ++ +++  +DI 
Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGDEHYQTARMVQQVLQKYKSLQDII 386

Query: 391 LIGG 394
            I G
Sbjct: 387 AILG 390


>gi|239832877|ref|ZP_04681206.1| ATP synthase F1, beta subunit [Ochrobactrum intermedium LMG 3301]
 gi|239825144|gb|EEQ96712.1| ATP synthase F1, beta subunit [Ochrobactrum intermedium LMG 3301]
          Length = 516

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 129 LGRIMNVIGEPVDEAGPI-KTTATRAIHQSAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 187

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 188 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 246

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 247 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 306

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 307 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 364

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     DE   V+  +  ++ R++  +D
Sbjct: 365 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGDEHYAVARQVQSILQRYKALQD 424

Query: 389 IRLIGG 394
           I  I G
Sbjct: 425 IIAILG 430


>gi|227113923|ref|ZP_03827579.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 460

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|225677296|ref|ZP_03788275.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590659|gb|EEH11907.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 475

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 174/337 (51%), Gaps = 28/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   
Sbjct: 86  LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 144

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
           G +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+ 
Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 202

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266
                   ++V+V    +E P  R    LTA+T+ EYF  +   +VL  +D+I RF  + 
Sbjct: 203 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMTEYFRDRENQDVLFFVDNIFRFTQAG 262

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   
Sbjct: 263 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 320

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  S LD   VL+R +AE G YP VDPL S S+ L+ +    +   + S +  ++  ++ 
Sbjct: 321 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKS 380

Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419
            +DI  I G     D   +I+D+A      I  FL Q
Sbjct: 381 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413


>gi|112791380|gb|ABI21960.1| ATP synthase beta subunit [Pectobacterium wasabiae]
          Length = 421

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|34500004|gb|AAQ73584.1| ATP synthase beta subunit [Actinobacillus lignieresii]
          Length = 444

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +   +I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGPIGE-EARWDIHRXAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRIP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|258422897|ref|ZP_05685797.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9635]
 gi|257846921|gb|EEV70935.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9635]
          Length = 470

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + + +  +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISES-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|237744080|ref|ZP_04574561.1| ATP synthase subunit beta [Fusobacterium sp. 7_1]
 gi|256028115|ref|ZP_05441949.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. D11]
 gi|260494335|ref|ZP_05814466.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_33]
 gi|289766055|ref|ZP_06525433.1| ATP synthase subunit beta [Fusobacterium sp. D11]
 gi|229431309|gb|EEO41521.1| ATP synthase subunit beta [Fusobacterium sp. 7_1]
 gi|260198481|gb|EEW95997.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_33]
 gi|289717610|gb|EFD81622.1| ATP synthase subunit beta [Fusobacterium sp. D11]
          Length = 462

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+P+D    +   +  + I  + P   + +   + F+TGI+VID+  P   G
Sbjct: 84  LGRILNVLGEPVDNQGPI-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYIKG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE R+   +      + K+
Sbjct: 143 GKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVITKT 202

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   G +
Sbjct: 203 ALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLGRI 262

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD   
Sbjct: 263 PSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDATT 320

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S S+ L++     +  ++   +  ++ R++E +DI  I G
Sbjct: 321 VLSRNIASLGIYPAVDPLDSTSKALSEDIVGKEHYEIARKVQEVLQRYKELQDIIAILG 379


>gi|154687796|ref|YP_001422957.1| F0F1 ATP synthase subunit beta [Bacillus amyloliquefaciens FZB42]
 gi|166201690|sp|A7Z9Q0|ATPB_BACA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154353647|gb|ABS75726.1| AtpD [Bacillus amyloliquefaciens FZB42]
          Length = 473

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG  ID ++ L   D   + + +  P+ +    E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGDKIDLNEPL-PADAQKDPIHRSAPSFDELSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    LT +T+AE+F  K G +VL  +D+I RF  +  E++   
Sbjct: 209 KKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDKQGQDVLFFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR LA +    +   +   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|42561403|ref|NP_975854.1| F0F1 ATP synthase subunit beta [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|81829344|sp|Q6MS94|ATPB_MYCMS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|42492901|emb|CAE77496.1| ATP SYNTHASE BETA CHAIN [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
          Length = 475

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 159/305 (52%), Gaps = 18/305 (5%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSM 126
           +IV    +G  E +  G  V +      +P+     GR+ N LG PID    L   D+  
Sbjct: 62  EIVRTIAMGPTEGLKRGLDVINTNSPITAPTGMEVLGRMFNVLGDPIDEKPDL---DVKR 118

Query: 127 EIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-- 183
           E + K  P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+       
Sbjct: 119 EPIHKDAPKYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNI 178

Query: 184 SDCFDKV-IISLVGERGRE----VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           +   + V + + VGER RE      EFIE  +   L K+ +V    +E P  R    LT 
Sbjct: 179 AKAHNGVSVFAGVGERTREGNDLYHEFIEAGV---LNKTCLVFGQMNEPPGARMRVALTG 235

Query: 239 VTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +TIAEYF   K  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 236 LTIAEYFRDQKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  + G+IT+V +V V  D+  DP   +  + LD  IVL+RS+A  G YP VDPLAS 
Sbjct: 296 --TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASS 353

Query: 358 SRLAD 362
           SR+ D
Sbjct: 354 SRVLD 358


>gi|319796134|ref|YP_004157774.1| ATP synthase f1, beta subunit [Variovorax paradoxus EPS]
 gi|315598597|gb|ADU39663.1| ATP synthase F1, beta subunit [Variovorax paradoxus EPS]
          Length = 466

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/310 (34%), Positives = 162/310 (52%), Gaps = 21/310 (6%)

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+++ LG+PID  GD S    DL+  I  K P        +   +TGI+VID+  P
Sbjct: 81  ATLGRIMDVLGRPIDERGDVSQ---DLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCP 137

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +     
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
               DNL +S V  V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +
Sbjct: 197 VVNLDNLPESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 257 GTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD  +VL+R +A  G YP VDPL S SR  D     +E   V+ ++   + R++
Sbjct: 315 ATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQRYK 374

Query: 385 ETRDIRLIGG 394
           E RDI  I G
Sbjct: 375 ELRDIIAILG 384


>gi|167916130|ref|ZP_02503221.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 112]
          Length = 409

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 12/288 (4%)

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G P D   +L        I    PP   ++     F TGI+VID+  PL  G +  +F G
Sbjct: 2   GAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGG 61

Query: 170 SGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
           +G+GK+ L+     +M  R       + + +GER RE  E + D  G   L ++V+V   
Sbjct: 62  AGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQ 119

Query: 224 SDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   G LP   GY
Sbjct: 120 MNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGY 179

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D  +VL+R++
Sbjct: 180 QPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAM 237

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           A EG YP +DP+AS S L D     +    V+  +  +I  + E +D+
Sbjct: 238 AAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 285


>gi|46199210|ref|YP_004877.1| V-type ATP synthase subunit B [Thermus thermophilus HB27]
 gi|55981241|ref|YP_144538.1| V-type ATP synthase subunit B [Thermus thermophilus HB8]
 gi|32172456|sp|Q56404|VATB_THET8 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|81567676|sp|Q72J73|VATB_THET2 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|261278600|pdb|3A5C|D Chain D, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278601|pdb|3A5C|E Chain E, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278602|pdb|3A5C|F Chain F, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278608|pdb|3A5C|L Chain L, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278609|pdb|3A5C|M Chain M, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278610|pdb|3A5C|N Chain N, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278616|pdb|3A5D|D Chain D, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278617|pdb|3A5D|E Chain E, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278618|pdb|3A5D|F Chain F, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278624|pdb|3A5D|L Chain L, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278625|pdb|3A5D|M Chain M, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|261278626|pdb|3A5D|N Chain N, Inter-Subunit Interaction And Quaternary Rearrangement
           Defined By The Central Stalk Of Prokaryotic V1-Atpase
 gi|25188144|dbj|BAA09874.2| vacuolar type ATP synthase subunit [Thermus thermophilus]
 gi|46196835|gb|AAS81250.1| V-type sodium ATP synthase subunit B [Thermus thermophilus HB27]
 gi|55772654|dbj|BAD71095.1| V-type ATP synthase subunit B [Thermus thermophilus HB8]
          Length = 478

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 22/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +GKPIDG   +   +  + I       + R++ E+  +TGI  ID
Sbjct: 81  RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPITGLPLNPVARRKPEQFIQTGISTID 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200
           +   L  GQ++ +F+GSG+  + + +  AR                   V+ + +G   R
Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199

Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
           E+  FI+++     L +SV+ +  +D+  I R + P  A+T+AEY + + D +VL+IL  
Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +T +  ++REI     E+P  RGYP  ++++L  + ER G  E +KG++T +  + +  D
Sbjct: 260 MTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374
           +   PI D    I +G I L+R L  +G YPP+DPL S+SRL +    K  + ++ K VS
Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379

Query: 375 SLTHLIHRFEETRDIR 390
               L   +    DIR
Sbjct: 380 D--QLYSAYANGVDIR 393


>gi|307257728|ref|ZP_07539485.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863634|gb|EFM95560.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 467

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 92  LGRIMNVLGEPIDEKGPIGE-EARWNIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 151 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 211 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 270

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 271 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 328

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 329 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 386


>gi|77461947|ref|YP_351454.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens Pf0-1]
 gi|118573725|sp|Q3K441|ATPB_PSEPF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77385950|gb|ABA77463.1| ATP synthase beta chain [Pseudomonas fluorescens Pf0-1]
          Length = 458

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +    I    P    +    +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEAGPIGE-EERWGIHRAAPSFAEQAGGNELLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      D  +    + +++ R++E +DI  I G
Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNDHYETARGVQYVLQRYKELKDIIAILG 377


>gi|330831705|ref|YP_004394657.1| H(+)-transporting two-sector ATPase, F(1) subunit beta [Aeromonas
           veronii B565]
 gi|328806841|gb|AEB52040.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Aeromonas
           veronii B565]
          Length = 462

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+ +    I    P   ++       +TGI+VID+  P   G 
Sbjct: 88  GRIMNVLGEPIDEKGPIGEEE-CWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  + +  N L K  
Sbjct: 147 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVS 206

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 207 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 266

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 267 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVL 324

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S SR  D      E  +    +  ++ R++E +DI  I G
Sbjct: 325 SRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHYETARGVQTVLQRYKELKDIIAILG 381


>gi|167907786|ref|ZP_02494991.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei NCTC
           13177]
          Length = 414

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 12/288 (4%)

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G P D   +L        I    PP   ++     F TGI+VID+  PL  G +  +F G
Sbjct: 3   GAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGG 62

Query: 170 SGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
           +G+GK+ L+     +M  R       + + +GER RE  E + D  G   L ++V+V   
Sbjct: 63  AGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQ 120

Query: 224 SDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R   PLTA+ IAEYF   +  NVLL++D++ RF  +  E++   G LP   GY
Sbjct: 121 MNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGY 180

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ SE+  L ERI  +  E   +TA+ +V V  D+  DP   ++ + +D  +VL+R++
Sbjct: 181 QPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAM 238

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           A EG YP +DP+AS S L D     +    V+  +  +I  + E +D+
Sbjct: 239 AAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 286


>gi|300870132|ref|YP_003785003.1| F0F1-ATP synthase subunit beta [Brachyspira pilosicoli 95/1000]
 gi|300687831|gb|ADK30502.1| F0F1-ATP synthase, subunit beta [Brachyspira pilosicoli 95/1000]
          Length = 417

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 166/321 (51%), Gaps = 10/321 (3%)

Query: 81  ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           IS GD +   G   + P      GR+ N LG+ +D  + + K      I +  P     +
Sbjct: 17  ISRGDEIIDTGNHIMVPVGNETIGRIFNVLGQTVDKGEPI-KAKEYRSIHANPPKFDALE 75

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVG 196
              + F+TGI+VID+  P   G + G+F G+G+GK+ L+        S+     + + VG
Sbjct: 76  PKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIASEHGGYSVFAGVG 135

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLL 254
           ER RE  +   +      + K+ +V    +E P  R    LTA+T+AEYF    + +VLL
Sbjct: 136 ERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALTALTMAEYFRDSANLDVLL 195

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V 
Sbjct: 196 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKHGSITSIQAVY 253

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R ++E+G YP VDPLAS SR+ D      +  ++ 
Sbjct: 254 VPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILDPIVLGKEHYEVA 313

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             + H++ R+ + +DI  I G
Sbjct: 314 RKVQHILQRYRDLQDIIAILG 334


>gi|50123428|ref|YP_052595.1| F0F1 ATP synthase subunit beta [Pectobacterium atrosepticum
           SCRI1043]
 gi|81826953|sp|Q6CYJ5|ATPB_ERWCT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49613954|emb|CAG77407.1| ATP synthase beta chain [Pectobacterium atrosepticum SCRI1043]
          Length = 460

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|58268632|ref|XP_571472.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134113416|ref|XP_774733.1| hypothetical protein CNBF4120 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257377|gb|EAL20086.1| hypothetical protein CNBF4120 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227707|gb|AAW44165.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 547

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 165/314 (52%), Gaps = 22/314 (7%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + P+A   GR++N +G+PID    + KG     I +  PP +++    +  +TGI+V+D+
Sbjct: 155 VGPAAL--GRIMNVIGQPIDQRGPI-KGVREAPIHADAPPFVDQSTQAEVLETGIKVVDL 211

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVREFIEDYL 210
             P   G +IG+F G+G+GK+ L+       A++     V    VGER RE  +   +  
Sbjct: 212 LAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMR 270

Query: 211 --------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                   GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I R
Sbjct: 271 ETGVINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFR 328

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  
Sbjct: 329 FTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLT 386

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D +        + +    ++
Sbjct: 387 DPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRMLDPRVVGQRHYDIATKTQQIL 446

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 447 QSYKSLQDIIAILG 460


>gi|153833268|ref|ZP_01985935.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
 gi|156977318|ref|YP_001448224.1| F0F1 ATP synthase subunit beta [Vibrio harveyi ATCC BAA-1116]
 gi|269961117|ref|ZP_06175485.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
 gi|190358281|sp|A7N6Q5|ATPB2_VIBHB RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|148870404|gb|EDL69325.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
 gi|156528912|gb|ABU73997.1| hypothetical protein VIBHAR_06104 [Vibrio harveyi ATCC BAA-1116]
 gi|269834068|gb|EEZ88159.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
          Length = 461

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG PID    +G+  +S EI    P    +       +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGHPIDECGPIGE-QVSYEIHRDAPSYEEQSNSTALLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPQVVGQEHYDVARKVQQTLQRYKELKDIIAILG 380


>gi|257452841|ref|ZP_05618140.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. 3_1_5R]
 gi|257466794|ref|ZP_05631105.1| F0F1 ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917942|ref|ZP_07914182.1| ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059382|ref|ZP_07923867.1| ATP synthase subunit beta [Fusobacterium sp. 3_1_5R]
 gi|313685058|gb|EFS21893.1| ATP synthase subunit beta [Fusobacterium sp. 3_1_5R]
 gi|313691817|gb|EFS28652.1| ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC 25563]
          Length = 465

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 159/305 (52%), Gaps = 17/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KG +  E    I  + P    ++ V + F+TGI+VID+ 
Sbjct: 82  AVLGRILNVLGEPVDQ-----KGPVETEEYLPIHREAPKFEEQETVTEIFETGIKVIDLL 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G + G+F G+G+GK+ L+     +       IS+   VGER RE R+   +    
Sbjct: 137 APYIKGGKTGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTES 196

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
             L K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++
Sbjct: 197 GVLNKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSEVS 256

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S
Sbjct: 257 ALLGRIPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFS 314

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A  G YP VDPL S S+ L+      +  ++   +  ++ R+ E +DI
Sbjct: 315 HLDATTVLSRDIASLGIYPAVDPLDSTSKALSPDIVGKEHYEVAREVQRVLQRYTELQDI 374

Query: 390 RLIGG 394
             I G
Sbjct: 375 IAILG 379


>gi|125717636|ref|YP_001034769.1| F0F1 ATP synthase subunit beta [Streptococcus sanguinis SK36]
 gi|166222420|sp|A3CM14|ATPB_STRSV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|125497553|gb|ABN44219.1| Proton-translocating ATPase, F1 sector, beta subunit, putative
           [Streptococcus sanguinis SK36]
 gi|324990540|gb|EGC22476.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK353]
 gi|324993286|gb|EGC25206.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK405]
 gi|327461557|gb|EGF07888.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1]
 gi|327473281|gb|EGF18701.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK408]
 gi|327489411|gb|EGF21204.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1058]
 gi|328945463|gb|EGG39614.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1087]
          Length = 468

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID D           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLDAPFPADAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|49049|emb|CAA45341.1| ATPase beta-subunit [Thermus thermophilus]
          Length = 478

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 22/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +GKPIDG   +   +  + I       + R++ E+  +TGI  ID
Sbjct: 81  RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPITGLPLNPVARRKPEQFIQTGISTID 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200
           +   L  GQ++ +F+GSG+  + + +  AR                   V+ + +G   R
Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199

Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
           E+  FI+++     L +SV+ +  +D+  I R + P  A+T+AEY + + D +VL+IL  
Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +T +  ++REI     E+P  RGYP  ++++L  + ER G  E +KG++T +  + +  D
Sbjct: 260 MTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374
           +   PI D    I +G I L+R L  +G YPP+DPL S+SRL +    K  + ++ K VS
Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379

Query: 375 SLTHLIHRFEETRDIR 390
               L   +    DIR
Sbjct: 380 D--QLYSAYANGVDIR 393


>gi|124265390|ref|YP_001019394.1| F0F1 ATP synthase subunit beta [Methylibium petroleiphilum PM1]
 gi|190358680|sp|A2SC70|ATPB_METPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|124258165|gb|ABM93159.1| Sodium-transporting two-sector ATPase [Methylibium petroleiphilum
           PM1]
          Length = 471

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 173/340 (50%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G +V + G     P      GR+++ LG PID    +   +LSM 
Sbjct: 54  VVRTIALGSSDGLRRGLMVSNTGAAITVPVGKATLGRIMDVLGSPIDERGPV-SAELSMP 112

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 113 IHRKAPAYDELSPSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 172

Query: 184 SDCFDKVIISLVGERGREVREFIEDY------LGDNLKKSVV--VVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +       + ++L +S V  V    +E P  R    
Sbjct: 173 AHSGLSVFAG-VGERTREGNDFYHEMSDSKVVVQEDLTQSKVAMVYGQMNEPPGNRLRVA 231

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 232 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 291

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 292 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLD 349

Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           S SR  D     +E      ++  ++ R++E RDI  I G
Sbjct: 350 STSRQIDPNVVGEEHYNTTRAVQQVLQRYKELRDIIAILG 389


>gi|329578108|gb|EGG59520.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1467]
          Length = 465

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV + LG  ID +           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFSVLGDTIDLEAPFPADAERSGIHKKAPAFDELSTSNEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
              G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GNKGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  LA +    +  ++ + + H++ R+ E +DI  I G
Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYEVATEVQHILQRYRELQDIIAILG 385


>gi|308051487|ref|YP_003915053.1| ATP synthase F1 subcomplex beta subunit [Ferrimonas balearica DSM
           9799]
 gi|307633677|gb|ADN77979.1| ATP synthase F1 subcomplex beta subunit [Ferrimonas balearica DSM
           9799]
          Length = 460

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +    I  + P   ++    +  +TG++VID+  P  
Sbjct: 83  ATLGRIMNVLGEPIDEAGDIGE-EERWSIHREAPSYEDQSSATELLETGVKVIDLVCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--ASTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP +DPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VVLSRDIAARGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQSVLQRYKELKDIIAILG 379


>gi|313680348|ref|YP_004058087.1| h+transporting two-sector atpase alpha/beta subunit central region
           [Oceanithermus profundus DSM 14977]
 gi|313153063|gb|ADR36914.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Oceanithermus profundus DSM 14977]
          Length = 467

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 15/317 (4%)

Query: 60  GQVIRINLDI----VYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQVI ++ +     V+    G+    +   LV    R  +SP     GR  N +GKPIDG
Sbjct: 45  GQVIEVSEEYAVIQVFEETTGLDLATTTVSLVEDVARLGVSPE--MLGRRFNGIGKPIDG 102

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +        I   + P + R++ E+  +TGI  ID+   +  GQ++ +F+GSG+  +
Sbjct: 103 LPPITPEKREPIIGKPINP-VARRKPEEFIQTGISTIDVMNTMVRGQKLPIFSGSGLPAN 161

Query: 176 TLLSMFARS------DCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
            L +  AR       D    V+ + +G   RE+  F+ ++     L +SV+ +  +D+  
Sbjct: 162 ELAAQIARQATVPGEDVQFAVVFAAMGITQRELSFFVNEFERTGALARSVLFLNKADDPT 221

Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R + P  A+T+AEY + + D +VL+IL  +  +  ++RE+A +  E+P  RGYP  ++
Sbjct: 222 IERILTPRMALTVAEYLAFEHDYHVLVILTDMLNYCDALREVAASREEIPGRRGYPGYMY 281

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++L  + ER G  E + G++T +  + +  D+   P+ D    I +G I L+R L  +  
Sbjct: 282 TDLATIYERAGVIEGKSGSVTQLPILSMPDDDRTHPVPDLTGYITEGQIQLSRELHRKNL 341

Query: 348 YPPVDPLASVSRLADKA 364
           YPP+DPL S+SRL + A
Sbjct: 342 YPPIDPLPSLSRLMNNA 358


>gi|261823738|ref|YP_003261844.1| F0F1 ATP synthase subunit beta [Pectobacterium wasabiae WPP163]
 gi|261607751|gb|ACX90237.1| ATP synthase F1, beta subunit [Pectobacterium wasabiae WPP163]
          Length = 460

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|154251918|ref|YP_001412742.1| F0F1 ATP synthase subunit beta [Parvibaculum lavamentivorans DS-1]
 gi|190358697|sp|A7HT52|ATPB_PARL1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154155868|gb|ABS63085.1| ATP synthase F1, beta subunit [Parvibaculum lavamentivorans DS-1]
          Length = 478

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 20/309 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+P+D    + K +   EI  + P  + +    +   TGI+V+D+  P   G 
Sbjct: 87  GRIINVIGEPVDEAGPV-KHEARREIHQEAPSFVEQSTEAQMLVTGIKVVDLLAPYARGG 145

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----- 210
           +IG+F G+G+GK+ L+     +         + + VGER RE      E IE  +     
Sbjct: 146 KIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDPN 205

Query: 211 ---GDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
              GD    K  +V    +E P  R    LT +T+AE+F  KG +VL  +D+I RF  + 
Sbjct: 206 ENNGDTTGSKCALVFGQMNEPPGARARVALTGLTVAEHFRDKGQDVLFFVDNIFRFTQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   
Sbjct: 266 SEVSALLGRIPSAVGYQPTLSTDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VLNR+++E+G YP VDPL S SR L  +    +       +  ++ R++ 
Sbjct: 324 TSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILEPRVVGQEHYDTARQVQEILQRYKS 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|301320724|gb|ADK69367.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 475

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/312 (34%), Positives = 160/312 (51%), Gaps = 18/312 (5%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSM 126
           +IV    +G  E +  G  V +      +P+     GR+ N LG PID    L   D+  
Sbjct: 62  EIVRTIAMGPTEGLKRGLDVINTNSPITAPTGMEVLGRMFNVLGDPIDEKPDL---DVKR 118

Query: 127 EIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-- 183
           E + K  P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+       
Sbjct: 119 EPIHKDAPKYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNI 178

Query: 184 SDCFDKV-IISLVGERGRE----VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           +   + V + + VGER RE      EFIE  +   L K+ +V    +E P  R    LT 
Sbjct: 179 AKAHNGVSVFAGVGERTREGNDLYHEFIEAGV---LNKTCLVFGQMNEPPGARMRVALTG 235

Query: 239 VTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +TIAEYF   K  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 236 LTIAEYFRDQKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  + G+IT+V +V V  D+  DP   +  + LD  IVL+RS+A  G YP VDPLAS 
Sbjct: 296 --TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASS 353

Query: 358 SRLADKAWSADE 369
           SR+ D      E
Sbjct: 354 SRVLDPEIVGQE 365


>gi|294638351|ref|ZP_06716604.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685]
 gi|291088604|gb|EFE21165.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685]
          Length = 460

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG P+D    +G+ +    I    P   +    ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGDPVDMKGEIGEEE-RWAIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|118590578|ref|ZP_01547980.1| F0F1 ATP synthase subunit beta [Stappia aggregata IAM 12614]
 gi|118437041|gb|EAV43680.1| F0F1 ATP synthase subunit beta [Stappia aggregata IAM 12614]
          Length = 474

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 25/310 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR++N +G+P+D       G++  E    + +  PA   Q  E     TGI+V+D+  P
Sbjct: 87  LGRIMNVIGEPVDE-----AGEIPHENKRAIHQEAPAFIEQSTEAEILVTGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  
Sbjct: 142 YAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESG 200

Query: 210 L----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           +    G    K+ +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +
Sbjct: 201 VNKEGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTNKGSITSVQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            S  + LD   VLNRS+AE+G YP VDPL S SR+ D     +E  +   ++   + R++
Sbjct: 319 ASTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDARIIGEEHYETARAVQVTLQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 ALQDIIAILG 388


>gi|261856899|ref|YP_003264182.1| ATP synthase F1 subunit beta [Halothiobacillus neapolitanus c2]
 gi|261837368|gb|ACX97135.1| ATP synthase F1, beta subunit [Halothiobacillus neapolitanus c2]
          Length = 462

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 16/301 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPL 158
           GR+++ LG PID       GD++ +    + + PP  + Q    +  +TGI+VID+  P 
Sbjct: 84  GRIMDVLGHPIDN-----AGDVACDEKWSIHRKPPTFDEQANSTELLETGIKVIDLLCPF 138

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYL-GDNL 214
             G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +   G  L
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKDGGVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE+F  +G +VL+ +D+I R+  +  E++   G
Sbjct: 199 DKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALLG 258

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP +DPL S SR  D     D    V+ S+   + R++E +DI  I 
Sbjct: 317 TVVLSRDIASLGIYPAIDPLDSTSRQLDPQVVGDTHYSVARSVQKTLQRYKELKDIIAIL 376

Query: 394 G 394
           G
Sbjct: 377 G 377


>gi|112791356|gb|ABI21948.1| ATP synthase beta subunit [Rahnella aquatilis]
          Length = 421

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +    I    P        ++  +TGI+V+D+  P  
Sbjct: 58  ATLGRIMNVLGEPIDMKGEIGEEE-RRAIHRAAPSYEELANSQELLETGIKVMDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|77361904|ref|YP_341479.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas haloplanktis
           TAC125]
 gi|118573724|sp|Q3IK50|ATPB_PSEHT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|76876815|emb|CAI88037.1| membrane-bound ATP synthase, F1 sector, beta-subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 461

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 167/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G  V + G   ++       GR++N LG+PID    +G+ D  M 
Sbjct: 52  VVRTIAMGTTDGLRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMS 110

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 111 IHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--ASTK 288

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD- 362
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +    +       +  ++ R++E +DI  I G
Sbjct: 349 QVIGQEHYDTARGVQTVLQRYKELKDIIAILG 380


>gi|294505644|ref|YP_003569706.1| ATP synthase beta subunit protein [Yersinia pestis Z176003]
 gi|294356103|gb|ADE66444.1| ATP synthase beta subunit protein [Yersinia pestis Z176003]
          Length = 447

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +    I  + P        +   +TGI+V+D+  P  
Sbjct: 70  ATLGRIMNVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 128

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 129 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 188

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 189 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 248

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 249 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 306

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 307 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 366


>gi|218295778|ref|ZP_03496574.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermus aquaticus Y51MC23]
 gi|218243937|gb|EED10464.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermus aquaticus Y51MC23]
          Length = 478

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 153/286 (53%), Gaps = 16/286 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +GKPIDG   +   +  + I+      + R++ E+  +TGI  ID
Sbjct: 81  RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPIVGLPLNPVARRKPEEFIQTGISTID 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200
           +   L  GQ++ +F+GSG+  + + +  AR                   V+ + +G   R
Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199

Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
           E+  FI+++     L +SV+ +  +D+  I R + P  A+T+AEY + + D +VL+IL  
Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +T +  ++REI     E+P  RGYP  ++++L  + ER G  + +KG++T +  + +  D
Sbjct: 260 MTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVQGKKGSVTQIPILSMPDD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +   PI D    I +G I L+R L  +G YPP+DPL S+SRL + A
Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNA 365


>gi|298400629|gb|ADI81634.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400631|gb|ADI81635.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400633|gb|ADI81636.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400635|gb|ADI81637.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400637|gb|ADI81638.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400639|gb|ADI81639.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400641|gb|ADI81640.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400643|gb|ADI81641.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400645|gb|ADI81642.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400647|gb|ADI81643.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400649|gb|ADI81644.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400651|gb|ADI81645.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400653|gb|ADI81646.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400655|gb|ADI81647.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400657|gb|ADI81648.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400659|gb|ADI81649.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400661|gb|ADI81650.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400663|gb|ADI81651.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400665|gb|ADI81652.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400667|gb|ADI81653.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene
           melpomene]
 gi|298400669|gb|ADI81654.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400671|gb|ADI81655.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400673|gb|ADI81656.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400675|gb|ADI81657.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400677|gb|ADI81658.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400679|gb|ADI81659.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400681|gb|ADI81660.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400683|gb|ADI81661.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400685|gb|ADI81662.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400687|gb|ADI81663.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400689|gb|ADI81664.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400691|gb|ADI81665.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400693|gb|ADI81666.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400695|gb|ADI81667.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400697|gb|ADI81668.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400699|gb|ADI81669.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400701|gb|ADI81670.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400703|gb|ADI81671.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400705|gb|ADI81672.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400707|gb|ADI81673.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa]
 gi|298400709|gb|ADI81674.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400711|gb|ADI81675.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400713|gb|ADI81676.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400715|gb|ADI81677.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400717|gb|ADI81678.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400719|gb|ADI81679.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400721|gb|ADI81680.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400723|gb|ADI81681.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400725|gb|ADI81682.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400727|gb|ADI81683.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400729|gb|ADI81684.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400731|gb|ADI81685.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400733|gb|ADI81686.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400735|gb|ADI81687.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400737|gb|ADI81688.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400739|gb|ADI81689.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400741|gb|ADI81690.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400743|gb|ADI81691.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400745|gb|ADI81692.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
 gi|298400747|gb|ADI81693.1| H+ transporting ATP synthase beta subunit [Heliconius cydno
           cordula]
          Length = 352

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/282 (34%), Positives = 152/282 (53%), Gaps = 16/282 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D +  I ++ P  ++    ++   TGI+V+
Sbjct: 60  IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 118

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 119 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 177

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 178 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 237

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 238 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D
Sbjct: 296 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 337


>gi|238921743|ref|YP_002935258.1| F0F1 ATP synthase subunit beta [Edwardsiella ictaluri 93-146]
 gi|269140874|ref|YP_003297575.1| F0F1-type ATP synthase, beta subunit [Edwardsiella tarda EIB202]
 gi|259585444|sp|C5BF40|ATPB_EDWI9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|238871312|gb|ACR71023.1| ATP synthase subunit beta [Edwardsiella ictaluri 93-146]
 gi|267986535|gb|ACY86364.1| F0F1-type ATP synthase, beta subunit [Edwardsiella tarda EIB202]
 gi|304560632|gb|ADM43296.1| ATP synthase beta chain [Edwardsiella tarda FL6-60]
          Length = 460

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG P+D    +G+ +    I    P   +    ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGDPVDMKGEIGEEE-RWAIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|332533718|ref|ZP_08409577.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036882|gb|EGI73343.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505]
          Length = 461

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 167/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +    LV + G   ++       GR++N LG+PID    +G+ D  M 
Sbjct: 52  VVRTIAMGTTDGLRRSALVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMS 110

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 111 IHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--ASTK 288

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD- 362
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +    +       +  ++ R++E +DI  I G
Sbjct: 349 QVIGQEHYDTARGVQTVLQRYKELKDIIAILG 380


>gi|112791368|gb|ABI21954.1| ATP synthase beta subunit [Brenneria rubrifaciens]
          Length = 416

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 16/301 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+  P 
Sbjct: 59  GRIMNVLGEPVDM-----KGDIGEEECWPIHRSAPSYEELSNSQELLETGIKVIDLMCPF 113

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N +
Sbjct: 114 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVI 173

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 174 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLG 233

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 234 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 291

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I 
Sbjct: 292 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSVLQRYQELKDIIAIL 351

Query: 394 G 394
           G
Sbjct: 352 G 352


>gi|55820567|ref|YP_139009.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus LMG
           18311]
 gi|81820501|sp|Q5M5J1|ATPB_STRT2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|55736552|gb|AAV60194.1| H+-translocating ATPase beta subunit [Streptococcus thermophilus
           LMG 18311]
          Length = 468

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDMEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERSREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|73748403|ref|YP_307642.1| F0F1 ATP synthase subunit beta [Dehalococcoides sp. CBDB1]
 gi|147669183|ref|YP_001214001.1| F0F1 ATP synthase subunit beta [Dehalococcoides sp. BAV1]
 gi|289432451|ref|YP_003462324.1| ATP synthase F1 subunit beta [Dehalococcoides sp. GT]
 gi|118573526|sp|Q3ZZT7|ATPB_DEHSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081331|sp|A5FRQ5|ATPB_DEHSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|73660119|emb|CAI82726.1| ATP synthase F1, beta subunit [Dehalococcoides sp. CBDB1]
 gi|146270131|gb|ABQ17123.1| ATP synthase F1 subcomplex beta subunit [Dehalococcoides sp. BAV1]
 gi|288946171|gb|ADC73868.1| ATP synthase F1, beta subunit [Dehalococcoides sp. GT]
          Length = 464

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D    + K + +M I    P     +   +  +TGI+VID+  P   G
Sbjct: 85  LGRIFNVLGEALDNRGDV-KSEKTMPIHRLAPGMDELESSAQVLETGIKVIDLIAPFARG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG   G+G+GK+ L+    R+   +    S+   VGER RE  +   +      L K+
Sbjct: 144 GKIGALGGAGVGKTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEMEDSGVLPKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P +R    LT +T+AEYF   +  +VLL +D+I R+  +  E++   G +
Sbjct: 204 TMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRM 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +++  G+IT+  +V V  D++ DP   +    LD  I
Sbjct: 264 PSAVGYQPTLATEMGALQERIASTKQ--GSITSFQAVYVPADDYTDPGVVATFGHLDAMI 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L RSLAE+  YP VDPLAS SR+ D     +E  K+   +  ++ R+++ +D+  I G
Sbjct: 322 ALERSLAEQALYPAVDPLASNSRILDPQVVGEEHYKVARDVQKVLQRYKDLQDVIAILG 380


>gi|325275312|ref|ZP_08141265.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51]
 gi|324099560|gb|EGB97453.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51]
          Length = 458

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G D+V       +       GR+++ LG PID    +G+ +    
Sbjct: 49  VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGE-EERRG 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P   ++       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 108 IHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAM 167

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G++VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               +E  +    + +++ R++E +DI  I G
Sbjct: 346 NVIGNEHYETARGVQYVLQRYKELKDIIAILG 377


>gi|254501162|ref|ZP_05113313.1| ATP synthase F1, beta subunit [Labrenzia alexandrii DFL-11]
 gi|222437233|gb|EEE43912.1| ATP synthase F1, beta subunit [Labrenzia alexandrii DFL-11]
          Length = 474

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +   D    I  + P  + +    +   TGI+V+D+  P   G
Sbjct: 87  LGRIMNVIGEPVDEAGEIKHED-KRAIHQEAPEFVEQSTEAEILVTGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKE 204

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +TIAE F  KG +VL  +D+I RF  +  E+
Sbjct: 205 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP   S  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGGMQERI--TTTHKGSITSVQAVYVPADDLTDPAPASTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRD 388
           + LD   VLNRS+AE+G YP VDPL S SR+       DE    +    + + R++  +D
Sbjct: 323 AHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLSANIIGDEHYDTARAVQVTLQRYKALQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|221195082|ref|ZP_03568138.1| ATP synthase F1, beta subunit [Atopobium rimae ATCC 49626]
 gi|221184985|gb|EEE17376.1| ATP synthase F1, beta subunit [Atopobium rimae ATCC 49626]
          Length = 493

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 168/327 (51%), Gaps = 17/327 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N +G+P+DG       D+    +    PA      +   F+TGI+ ID+  P   G
Sbjct: 111 GRVWNVMGQPVDGKPI--PDDVEYYPIHHPAPAFEELTTQTEVFETGIKAIDLLEPYVRG 168

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            + G+F G+G+GK+ L+     +         + + VGER RE  + ++E      ++K+
Sbjct: 169 GKTGLFGGAGVGKTVLIQELINNLAQQHGGTSVFTGVGERTREGTDLYLEMTESGVIEKT 228

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G +P
Sbjct: 229 CLVYGQMNEPPGARMRVALAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGRMP 288

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 289 SAVGYQPTLATEMGELQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 346

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+RS+ E G YP VDPLAS S   D +   +E  ++  ++   +  + + +DI  I    
Sbjct: 347 LSRSITELGIYPAVDPLASSSSALDPSIVGEEHYRVAMAVQETLQEYSDLQDIIAI---- 402

Query: 397 PGVDLILD---KAVHQVPIIYDFLKQS 420
            G+D + +   K V +   I  FL QS
Sbjct: 403 LGMDELSEEQQKTVARARKIQQFLSQS 429


>gi|320166885|gb|EFW43784.1| ATP synthase subunit beta [Capsaspora owczarzaki ATCC 30864]
          Length = 544

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 16/329 (4%)

Query: 79  EEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G L    G     P    C GR++N +G+PID    +      + I  + PP + 
Sbjct: 131 EGLTRGQLCLDLGNPIEIPVGPECLGRIMNVIGEPIDERGPI-NAKKKLPIHVEAPPFVE 189

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISL 194
               ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + 
Sbjct: 190 MSTQQQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAG 249

Query: 195 VGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-S 246
           VGER RE      E IE     LG    K  +V    +E P  R    LT +T+AEYF  
Sbjct: 250 VGERTREGNDLYHEMIESGVIQLGKPGSKVALVYGQMNEPPGARARVALTGLTVAEYFRD 309

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+
Sbjct: 310 EEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTRKGS 367

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D    
Sbjct: 368 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPRIV 427

Query: 367 ADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             E   V+ ++  ++  ++  +DI  I G
Sbjct: 428 GQEHYDVARAVQKILQDYKSLQDIIAILG 456


>gi|319948457|ref|ZP_08022593.1| F0F1 ATP synthase subunit beta [Dietzia cinnamea P4]
 gi|319437877|gb|EFV92861.1| F0F1 ATP synthase subunit beta [Dietzia cinnamea P4]
          Length = 482

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 166/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG   D  D+ G G D     + + PPA ++ +   +  +TG++VID+ TP   
Sbjct: 104 GHVFNALG---DCLDAPGTGRDGEQWGIHREPPAFDQLEGKTEILETGVKVIDLLTPYVK 160

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ 
Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQD 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G 
Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 281 MPSAVGYQPTLADEMGQLQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+RS+A +G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I G
Sbjct: 339 TELSRSIASKGIYPAVDPLTSTSRILEPGIVGEEHYRVAQEVIRILQKYKELQDIIAILG 398


>gi|331703817|ref|YP_004400504.1| ATP synthase beta chain [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|256384194|gb|ACU78764.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256385026|gb|ACU79595.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455506|gb|ADH21741.1| ATP synthase F1, beta subunit [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|328802372|emb|CBW54527.1| ATP synthase beta chain [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 475

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 159/305 (52%), Gaps = 18/305 (5%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSM 126
           +IV    +G  E +  G  V +      +P+     GR+ N LG PID    L   D+  
Sbjct: 62  EIVRTIAMGPTEGLKRGLDVINTNSPITAPTGIEVLGRMFNVLGDPIDEKPDL---DVKR 118

Query: 127 EIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-- 183
           E + K  P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+       
Sbjct: 119 EPIHKDAPKYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNI 178

Query: 184 SDCFDKV-IISLVGERGRE----VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           +   + V + + VGER RE      EFIE  +   L K+ +V    +E P  R    LT 
Sbjct: 179 AKAHNGVSVFAGVGERTREGNDLYHEFIEAGV---LNKTCLVFGQMNEPPGARMRVALTG 235

Query: 239 VTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +TIAEYF   K  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 236 LTIAEYFRDQKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  + G+IT+V +V V  D+  DP   +  + LD  IVL+RS+A  G YP VDPLAS 
Sbjct: 296 --TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASS 353

Query: 358 SRLAD 362
           SR+ D
Sbjct: 354 SRVLD 358


>gi|153008439|ref|YP_001369654.1| F0F1 ATP synthase subunit beta [Ochrobactrum anthropi ATCC 49188]
 gi|190358689|sp|A6WXX1|ATPB_OCHA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151560327|gb|ABS13825.1| ATP synthase F1, beta subunit [Ochrobactrum anthropi ATCC 49188]
          Length = 517

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K      I  + P  + +    +   TGI+V+D+  P   G
Sbjct: 130 LGRIMNVIGEPVDEAGPI-KTTARRAIHQEAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 188

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 189 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 247

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  KG +VL  +D+I RF  +  E+
Sbjct: 248 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDKGQDVLFFVDNIFRFTQAGSEL 307

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 308 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 365

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD    LNRS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +D
Sbjct: 366 AHLDATTTLNRSIAEKGIYPAVDPLESTSRMLDPMIVGEEHYAVARQVQSILQRYKSLQD 425

Query: 389 IRLIGG 394
           I  I G
Sbjct: 426 IIAILG 431


>gi|255320598|ref|ZP_05361775.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82]
 gi|262380769|ref|ZP_06073922.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164]
 gi|255302214|gb|EET81454.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82]
 gi|262297717|gb|EEY85633.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164]
          Length = 464

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 17/309 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           +AC  GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P
Sbjct: 80  TACL-GRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSN 196

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSI 266
            L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  + 
Sbjct: 197 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAG 256

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 257 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPA 314

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  S+ +++ R++E
Sbjct: 315 TTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKE 374

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 375 LKDIIAILG 383


>gi|112791358|gb|ABI21949.1| ATP synthase beta subunit [Yersinia enterocolitica]
          Length = 421

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P   +    +   +TGI+V+D+  P   G
Sbjct: 60  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|26992088|ref|NP_747513.1| F0F1 ATP synthase subunit beta [Pseudomonas putida KT2440]
 gi|148550495|ref|YP_001270597.1| F0F1 ATP synthase subunit beta [Pseudomonas putida F1]
 gi|81439305|sp|Q88BX4|ATPB_PSEPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990374|sp|A5WBA3|ATPB_PSEP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|24987230|gb|AAN70977.1|AE016742_6 ATP synthase F1, beta subunit [Pseudomonas putida KT2440]
 gi|148514553|gb|ABQ81413.1| ATP synthase F1, beta subunit [Pseudomonas putida F1]
 gi|313496403|gb|ADR57769.1| AtpB [Pseudomonas putida BIRD-1]
          Length = 458

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G D+V       +       GR+++ LG PID    +G+ +    
Sbjct: 49  VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGE-EERRG 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P   ++       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 108 IHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAM 167

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G++VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               +E  +    + +++ R++E +DI  I G
Sbjct: 346 NVIGNEHYETARGVQYVLQRYKELKDIIAILG 377


>gi|303252037|ref|ZP_07338207.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248695|ref|ZP_07530708.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|302649101|gb|EFL79287.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306854622|gb|EFM86812.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 457

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGPIGE-EARWNIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|304313401|ref|YP_003812999.1| F1-ATP synthase, beta subunit [gamma proteobacterium HdN1]
 gi|301799134|emb|CBL47377.1| F1-ATP synthase, beta subunit [gamma proteobacterium HdN1]
          Length = 459

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG  ID    +G+ + +  I  K P    +    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNAIDEAGPIGEQERA-SIHRKSPTFAEQAASNELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  S LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP +DPL S SR  D     DE   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRDIAAKGIYPAIDPLDSTSRQLDPLVIGDEHYTVARGVQTVLQRYKELKDIIAILG 377


>gi|223041784|ref|ZP_03611975.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202]
 gi|240950011|ref|ZP_04754319.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305]
 gi|223017410|gb|EEF15830.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202]
 gi|240295489|gb|EER46232.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305]
          Length = 457

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +   +I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGPIGEEE-RWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|113461832|ref|YP_719901.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 129PT]
 gi|123327497|sp|Q0I5X3|ATPB_HAES1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|112823875|gb|ABI25964.1| ATP synthase F1 subcomplex beta subunit [Haemophilus somnus 129PT]
          Length = 457

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  + +  I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGEIG-AEETWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|55822457|ref|YP_140898.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus
           CNRZ1066]
 gi|116627376|ref|YP_819995.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus LMD-9]
 gi|81820338|sp|Q5M104|ATPB_STRT1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122268023|sp|Q03LX3|ATPB_STRTD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|20070093|gb|AAM01190.1| H+-ATPase cytoplasmic F1-part beta-subunit [Streptococcus
           thermophilus]
 gi|55738442|gb|AAV62083.1| proton-translocating ATPase, beta subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116100653|gb|ABJ65799.1| F0F1-type ATP synthase, beta subunit [Streptococcus thermophilus
           LMD-9]
 gi|312277889|gb|ADQ62546.1| Proton-translocating ATPase beta subunit [Streptococcus
           thermophilus ND03]
          Length = 468

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDMEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERSREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|239917343|ref|YP_002956901.1| ATP synthase, F1 beta subunit [Micrococcus luteus NCTC 2665]
 gi|281414177|ref|ZP_06245919.1| F0F1 ATP synthase subunit beta [Micrococcus luteus NCTC 2665]
 gi|239838550|gb|ACS30347.1| ATP synthase, F1 beta subunit [Micrococcus luteus NCTC 2665]
          Length = 485

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG+ +D   S  + +    I    P   + +   +  +TGI+VID+ TP   G 
Sbjct: 105 GHIFNVLGETLDMPTSQLQAEDRWPIHRPAPNFASLEGSTEMLETGIKVIDLLTPYIKGG 164

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    D LK + 
Sbjct: 165 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMDEADVLKDTA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF+ +  E++T  G +P
Sbjct: 225 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +V + LD    
Sbjct: 285 SAVGYQPNLADEMGVLQERI--TSTRGHSITSMQAVYVPADDYTDPAPANVFAHLDATTN 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L R LA  G YP VDPLAS SR+ D  +   E   V+  +  ++ + +E +DI  I G
Sbjct: 343 LTRDLASRGLYPAVDPLASTSRILDPQYVGQEHYDVAIRVKQILQKNKELQDIIAILG 400


>gi|210623313|ref|ZP_03293730.1| hypothetical protein CLOHIR_01680 [Clostridium hiranonis DSM 13275]
 gi|210153714|gb|EEA84720.1| hypothetical protein CLOHIR_01680 [Clostridium hiranonis DSM 13275]
          Length = 464

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 155/299 (51%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  +D    L +G   M I  + P     +   +  +TGI+V+D+  P   G
Sbjct: 88  LGRVFNVLGNAVDRKGEL-EGVERMPIHRQSPDFDELETHAEILETGIKVVDLLAPYLKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       IS+   VGER RE  +  ++      L K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYQEMTESGVLSKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++ +G YP VDPL S SR+ D     +E  K    +  ++ R+ E +DI  I G
Sbjct: 325 VLSRQISSQGIYPAVDPLESTSRVLDPKIVGEEHYKTAREVQSILQRYRELQDIIAILG 383


>gi|288817497|ref|YP_003431844.1| F0F1-type ATP synthase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786896|dbj|BAI68643.1| F0F1-type ATP synthase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308751104|gb|ADO44587.1| ATP synthase F1, beta subunit [Hydrogenobacter thermophilus TK-6]
          Length = 473

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 166/312 (53%), Gaps = 13/312 (4%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149
           G  ++       GR+ N +G+PID    +   D     M + PP +  Q  + +  +TGI
Sbjct: 82  GPIKVPVGRATLGRIFNVVGQPIDEAGEVKAEDYWP--MFREPPPLEEQSTKVEILETGI 139

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-FDK---VIISLVGERGREVREF 205
           +V+D+  P   G ++G+F G+G+GK+ L+     +   F K   V+I  VGER RE  + 
Sbjct: 140 KVVDLLEPYVKGGKVGLFGGAGVGKTVLMQELIHNIAKFHKGFSVVIG-VGERTREGNDL 198

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
             +      L  +V+V    +E P +R     T +T+AEYF   +G +VL+ +D+I RF 
Sbjct: 199 WHEMKESGVLPYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRDVEGQDVLVFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++T  G LP A GY  ++ +++  + ERI  +  +KG++T++ +V V  D+  DP
Sbjct: 259 QAGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSLTSIQAVYVPADDITDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              SV + LD   VL R LAE G YP VDPL S S+     +  +E   V+  +  ++ R
Sbjct: 317 APYSVFAHLDATTVLARRLAELGIYPAVDPLESTSKYLAPEFVGEEHYTVAMEVKRILQR 376

Query: 383 FEETRDIRLIGG 394
           ++E ++I  I G
Sbjct: 377 YKELQEIIAILG 388


>gi|170293987|gb|ACB13087.1| ATP synthase beta subunit [Micromonas sp. SYD]
          Length = 366

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 159/305 (52%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 22  GRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 80

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++    N+     
Sbjct: 81  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYQEMCESNVINQKN 140

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 141 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFVDNIFRFVQAGSEVS 200

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 201 ALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFA 258

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S SR+       DE       +  L+ R++E +DI
Sbjct: 259 HLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEILGDEHYNCAQRVKELLQRYKELQDI 318

Query: 390 RLIGG 394
             I G
Sbjct: 319 IAILG 323


>gi|145630340|ref|ZP_01786121.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
 gi|145632746|ref|ZP_01788480.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655]
 gi|145634523|ref|ZP_01790232.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA]
 gi|145636253|ref|ZP_01791922.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH]
 gi|145640453|ref|ZP_01796037.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
 gi|148825242|ref|YP_001289995.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE]
 gi|229846566|ref|ZP_04466674.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1]
 gi|260582255|ref|ZP_05850048.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127]
 gi|166201709|sp|A5UA11|ATPB_HAEIE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|144984075|gb|EDJ91512.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
 gi|144986941|gb|EDJ93493.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655]
 gi|145268068|gb|EDK08063.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA]
 gi|145270418|gb|EDK10352.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH]
 gi|145275039|gb|EDK14901.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.4-21]
 gi|148715402|gb|ABQ97612.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE]
 gi|229810659|gb|EEP46377.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1]
 gi|260094623|gb|EEW78518.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127]
 gi|309972365|gb|ADO95566.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus
           influenzae R2846]
          Length = 457

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID   ++G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|319898003|ref|YP_004136200.1| f1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae F3031]
 gi|317433509|emb|CBY81892.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae F3031]
          Length = 457

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID   ++G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|212712645|ref|ZP_03320773.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM
           30120]
 gi|212684861|gb|EEB44389.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM
           30120]
          Length = 460

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P         +  +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWSIHRAAPSYEELANSTELLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|112791388|gb|ABI21964.1| ATP synthase beta subunit [Pectobacterium cacticida]
          Length = 421

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRPAPTYEELSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|325273538|ref|ZP_08139770.1| flagellum-specific ATP synthase [Pseudomonas sp. TJI-51]
 gi|324101331|gb|EGB98945.1| flagellum-specific ATP synthase [Pseudomonas sp. TJI-51]
          Length = 283

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 126/210 (60%), Gaps = 7/210 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           V++ PVG    I+ G  V      GR  +  S    GRV++  G+ +DG   + K +  +
Sbjct: 77  VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS LL M  R   
Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + +++ L+GERGREV+EFIE  LG + LK+SVVV + +D++P++R  A +    IAEYF
Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGE 275
             KG NVLL++DS+TRFA + REIA   GE
Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGE 283


>gi|238922550|ref|YP_002936063.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
 gi|238874222|gb|ACR73929.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
 gi|291526387|emb|CBK91974.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale DSM
           17629]
 gi|291526832|emb|CBK92418.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale
           M104/1]
          Length = 463

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID +    + +    I    P    +   ++  +TGI+V+D+  P   G
Sbjct: 89  LGRMFNVLGEPID-EVEPPQTEEKWAIHRPAPSFEEQATSQEMLETGIKVVDLLCPYQKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +         + + VGER RE  + + E      + K+
Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIATQHGGYSVFTGVGERTREGNDLYYEMKESGVIDKT 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L  +T+AEYF  +G  +VLL +D+I RF  +  E++   G +
Sbjct: 208 TMVFGQMNEPPGARMRVALAGLTMAEYFRDRGGKDVLLFVDNIFRFTQAGSEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL RS+AE G YP VDPLAS SR+ D      E  ++  ++  ++ +++E +DI  I G
Sbjct: 326 VLERSIAELGIYPAVDPLASTSRILDPRIVGQEHFEVAHAVQEILQKYKELQDIIAILG 384


>gi|89574047|gb|ABD77249.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Balaenoptera physalus]
          Length = 410

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 163/314 (51%), Gaps = 17/314 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI       GR++N +G+PID +  L K      I ++ P  M     ++   TGI+V+D
Sbjct: 37  RIPVGPETLGRIMNVIGEPID-ERGLIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVD 95

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E 
Sbjct: 96  LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 154

Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R
Sbjct: 155 IESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 214

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 215 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 272

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++
Sbjct: 273 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKIL 332

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 333 QDYKSLQDIIAILG 346


>gi|315128169|ref|YP_004070172.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913]
 gi|315016682|gb|ADT70020.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913]
          Length = 461

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 168/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G  V + G   ++       GR++N LG+PID    +G+ D  M 
Sbjct: 52  VVRTIALGTTDGLRRGAAVANTGEAIQVPVGTKTLGRIMNVLGEPIDEAGPIGE-DERMS 110

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 111 IHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--ASTK 288

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               +E   +   +  ++ R++E +DI  I G
Sbjct: 349 QVIGEEHYGIARGVQTVLQRYKELKDIIAILG 380


>gi|16272426|ref|NP_438639.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae Rd KW20]
 gi|68249081|ref|YP_248193.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 86-028NP]
 gi|145628859|ref|ZP_01784659.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21]
 gi|145638605|ref|ZP_01794214.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII]
 gi|229844360|ref|ZP_04464500.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1]
 gi|260580457|ref|ZP_05848285.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW]
 gi|319775594|ref|YP_004138082.1| F1 sector of membrane-bound ATP synthase subunit beta [Haemophilus
           influenzae F3047]
 gi|329122360|ref|ZP_08250947.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC
           11116]
 gi|2506208|sp|P43715|ATPB_HAEIN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81336513|sp|Q4QN64|ATPB_HAEI8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|1573457|gb|AAC22137.1| ATP synthase F1, subunit beta (atpD) [Haemophilus influenzae Rd
           KW20]
 gi|68057280|gb|AAX87533.1| ATP synthase beta chain [Haemophilus influenzae 86-028NP]
 gi|144979329|gb|EDJ89015.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21]
 gi|145272200|gb|EDK12108.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII]
 gi|229812609|gb|EEP48298.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1]
 gi|260092799|gb|EEW76734.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW]
 gi|301169199|emb|CBW28796.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae 10810]
 gi|309750106|gb|ADO80090.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus
           influenzae R2866]
 gi|317450185|emb|CBY86401.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae F3047]
 gi|327473642|gb|EGF19061.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC
           11116]
          Length = 457

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID   ++G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|112791374|gb|ABI21957.1| ATP synthase beta subunit [Brenneria salicis ATCC 15712]
          Length = 421

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRAAPTYEELSSSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|52426401|ref|YP_089538.1| F0F1 ATP synthase subunit beta [Mannheimia succiniciproducens
           MBEL55E]
 gi|81825450|sp|Q65Q07|ATPB_MANSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|52308453|gb|AAU38953.1| AtpD protein [Mannheimia succiniciproducens MBEL55E]
          Length = 458

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    +G  +    I  + P    +    +  +TGI+VID+  P   G 
Sbjct: 84  GRIMNVLGEPVDEQGPIG-AEEEWAIHREAPSYEEQSNSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K  
Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVLDKVS 202

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 320

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 321 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 377


>gi|193211720|ref|YP_001997673.1| F0F1 ATP synthase subunit beta [Chlorobaculum parvum NCIB 8327]
 gi|1168573|sp|P42465|ATPB_CHLP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|560823|emb|CAA54200.1| ATPase beta-subunit [Prosthecochloris vibrioformis]
 gi|193085197|gb|ACF10473.1| ATP synthase F1, beta subunit [Chlorobaculum parvum NCIB 8327]
          Length = 462

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 164/315 (52%), Gaps = 10/315 (3%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V + GR   +P  A   GR++N +G+PIDG   +     S  I    P         + F
Sbjct: 70  VANTGRPIQAPVGAEVLGRMLNVVGEPIDGKGPV-PSKKSYPIHRSAPKFDELSTKAEMF 128

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202
           +TGI+VID+  P   G + G+F G+G+GK+ L+     +   ++    + + VGER RE 
Sbjct: 129 ETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGYSVFAGVGERTREG 188

Query: 203 REFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            +   + +    + K+ +V    +E P  R    LT ++IAEYF   +G +VLL +D+I 
Sbjct: 189 NDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEGRDVLLFIDNIF 248

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+  L +RI     +KG++T+V ++ V  D+ 
Sbjct: 249 RFTQAGAEVSALLGRMPSAVGYQPTLGTEMGELQDRI--VSTKKGSVTSVQAIYVPADDL 306

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D      ++  +
Sbjct: 307 TDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIIGNDHYDTAQAVKQI 366

Query: 380 IHRFEETRDIRLIGG 394
           + R+++ +DI  I G
Sbjct: 367 LQRYKDLQDIIAILG 381


>gi|262371347|ref|ZP_06064665.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
 gi|262313684|gb|EEY94733.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
          Length = 464

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 161/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVAT-EARLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D     A+  ++  S+ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGAEHYEIARSVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|325291354|ref|YP_004267535.1| ATP synthase F1 subcomplex beta subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966755|gb|ADY57534.1| ATP synthase F1 subcomplex beta subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 467

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LGK ID    +  G     I  K P  +++   +   +TGI+V+D+  P   G
Sbjct: 88  LGRMVNVLGKAIDNLPEIDSGK-KYPIHRKAPKYVDQMTTDTILETGIKVVDLLAPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      + K 
Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGERTREGNDLWNEMKESGVISKM 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 207 AMVFGQMNEPPGARLRVALSGLTMAEYFRDDQGQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGNLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++ E G YP VDPL S S+ L      A+  ++   +  ++ R++E +DI  I G
Sbjct: 325 VLSRAITEIGIYPAVDPLDSTSQLLTPNIVGAEHYEVARGVQIILQRYKELQDIIAILG 383


>gi|262363809|gb|ACY60530.1| ATP synthase beta subunit protein [Yersinia pestis D106004]
 gi|262367745|gb|ACY64302.1| ATP synthase beta subunit protein [Yersinia pestis D182038]
          Length = 435

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +    I  + P        +   +TGI+V+D+  P  
Sbjct: 58  ATLGRIMNVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|254498170|ref|ZP_05110920.1| hypothetical protein LDG_2536 [Legionella drancourtii LLAP12]
 gi|254352609|gb|EET11394.1| hypothetical protein LDG_2536 [Legionella drancourtii LLAP12]
          Length = 445

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D D      D    I  K P    +   ++  +TGI+VID+  P   G
Sbjct: 70  LGRIMDVLGRPVD-DAGPIDADEHWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKG 128

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 129 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 188

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 189 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGVEVSALLGRMP 248

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 249 SAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 306

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E       +   + R++E +DI  I G
Sbjct: 307 LSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYDTARRVQQTLQRYKELKDIIAILG 364


>gi|242371594|ref|ZP_04817168.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis
           M23864:W1]
 gi|242350661|gb|EES42262.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis
           M23864:W1]
          Length = 470

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D+ +        I  + P         +  +TGI+V+D+  P  
Sbjct: 87  ATLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  S   KG++T++ +V V  D++ DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR  + +    E   V+  +   + ++ E +DI  I
Sbjct: 324 ATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYDVAREVQSTLQKYRELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|123444373|ref|YP_001008338.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166222426|sp|A1JTC6|ATPB_YERE8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122091334|emb|CAL14220.1| ATP synthase beta subunit protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|330861780|emb|CBX71953.1| ATP synthase subunit beta [Yersinia enterocolitica W22703]
          Length = 460

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P   +    +   +TGI+V+D+  P   G
Sbjct: 85  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 144 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 204 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 263

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 264 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 321

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 322 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|303232571|ref|ZP_07319257.1| ATP synthase F1, beta subunit [Atopobium vaginae PB189-T1-4]
 gi|302481358|gb|EFL44432.1| ATP synthase F1, beta subunit [Atopobium vaginae PB189-T1-4]
          Length = 492

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 160/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N +G+P+DG +     D+    +    PA +    +   F+TGI+ ID+  P   G
Sbjct: 112 GRVWNVMGQPVDGKEI--PDDVKYYPIHHPAPAFDELTTQTEIFETGIKAIDLLEPYVRG 169

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            + G+F G+G+GK+ L+     +   +     + + VGER RE  + ++E      + K+
Sbjct: 170 GKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMKESGVIDKT 229

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G +P
Sbjct: 230 CLVYGQMNEPPGARLRVGLAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGRMP 289

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 290 SAVGYQPTLATEMGDLQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 347

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++ E G YP VDPLAS S   D +   +E  ++  ++  ++ ++ + +DI  I G
Sbjct: 348 LSRAITELGIYPAVDPLASSSSALDPSVVGEEHYRVAMAVQEILQQYSDLQDIIAILG 405


>gi|257454338|ref|ZP_05619601.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60]
 gi|257448241|gb|EEV23221.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60]
          Length = 466

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 161/305 (52%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +   + +  I  + P    +    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEAGPVEHSN-TWAIHREAPSYDEQSNSTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQSGSITSVQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A +G YP VDPL S SR  D     +E   V+  +  ++ RF+E +DI
Sbjct: 319 HLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYAVARGVQEVLQRFKELKDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|283046836|ref|NP_001164361.1| ATP synthase subunit beta, mitochondrial [Tribolium castaneum]
 gi|270009266|gb|EFA05714.1| hypothetical protein TcasGA2_TC015322 [Tribolium castaneum]
          Length = 518

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +    L+  I ++ P  +     ++   TGI+V+
Sbjct: 122 IRIPVGAETLGRIINVIGEPIDERGPVPTDKLA-PIHAEAPEFVEMSVEQEILVTGIKVV 180

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 239

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 240 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 357

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 417

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 418 LQDYKSLQDIIAILG 432


>gi|46579188|ref|YP_009996.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603238|ref|YP_967638.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris DP4]
 gi|81830486|sp|Q72E04|ATPB_DESVH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201699|sp|A1VFJ5|ATPB_DESVV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|46448601|gb|AAS95255.1| ATP synthase, F1 beta subunit [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563467|gb|ABM29211.1| ATP synthase F1 subcomplex beta subunit [Desulfovibrio vulgaris
           DP4]
 gi|311233026|gb|ADP85880.1| ATP synthase F1, beta subunit [Desulfovibrio vulgaris RCH1]
          Length = 470

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 159/303 (52%), Gaps = 13/303 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR++N +G+P+D    LG    D S+ I    P    +    +  +TGI+V+D+  P
Sbjct: 89  ASLGRIMNVVGRPVD---ELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+ +L     +       IS+   VGER RE  +   +      
Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGV 205

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           L+K+ ++    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++  
Sbjct: 206 LEKAALIYGQMNEPPGARARVALTALACAEYFRDVENQDVLLFVDNIFRFTQAGSEVSAL 265

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S L
Sbjct: 266 LGRMPSAVGYQPTLGTDLGALQERI--TSTTKGSITSVQAVYVPADDLTDPAPATTFSHL 323

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           DG +VL+R +AE G YP VDPL S SR+ D      +   +   +  ++ ++++ +DI  
Sbjct: 324 DGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGVEHYGVARQVQQVLQKYKDLQDIIA 383

Query: 392 IGG 394
           I G
Sbjct: 384 ILG 386


>gi|325981216|ref|YP_004293618.1| ATP synthase F1, beta subunit [Nitrosomonas sp. AL212]
 gi|325530735|gb|ADZ25456.1| ATP synthase F1, beta subunit [Nitrosomonas sp. AL212]
          Length = 459

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G  +  M I  + P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEMGDIG-AEQHMSIHREAPAFDELAASTELLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +      L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESKVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 262 SAVGYQPTLAEEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E      ++   + R++E RDI  I G
Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYNTARAVQQTLQRYKELRDIIAILG 377


>gi|209559136|ref|YP_002285608.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes NZ131]
 gi|226740684|sp|B5XKQ1|ATPB_STRPZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|209540337|gb|ACI60913.1| ATP synthase beta chain [Streptococcus pyogenes NZ131]
          Length = 468

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID ++   +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVESQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR L+ +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|112791352|gb|ABI21946.1| ATP synthase beta subunit [Erwinia americana]
 gi|112791354|gb|ABI21947.1| ATP synthase beta subunit [Hafnia alvei]
          Length = 421

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +    I    P        ++  +TGI+V+D+  P  
Sbjct: 58  ATLGRIMNVLGEPIDMKGEIGEEE-RRAIHRPAPSYEELANSQELLETGIKVMDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|22128003|ref|NP_671426.1| F0F1 ATP synthase subunit beta [Yersinia pestis KIM 10]
 gi|45443751|ref|NP_995290.1| F0F1 ATP synthase subunit beta [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51598251|ref|YP_072442.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis IP
           32953]
 gi|108810156|ref|YP_654072.1| F0F1 ATP synthase subunit beta [Yersinia pestis Antiqua]
 gi|108814138|ref|YP_649905.1| F0F1 ATP synthase subunit beta [Yersinia pestis Nepal516]
 gi|145601152|ref|YP_001165228.1| F0F1 ATP synthase subunit beta [Yersinia pestis Pestoides F]
 gi|150260945|ref|ZP_01917673.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125]
 gi|153948511|ref|YP_001403118.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis IP
           31758]
 gi|162421072|ref|YP_001608472.1| F0F1 ATP synthase subunit beta [Yersinia pestis Angola]
 gi|165926118|ref|ZP_02221950.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939967|ref|ZP_02228504.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009572|ref|ZP_02230470.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213362|ref|ZP_02239397.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401612|ref|ZP_02307106.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422841|ref|ZP_02314594.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425526|ref|ZP_02317279.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170026430|ref|YP_001722935.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis YPIII]
 gi|186897468|ref|YP_001874580.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis PB1/+]
 gi|218931097|ref|YP_002348972.1| F0F1 ATP synthase subunit beta [Yersinia pestis CO92]
 gi|229839830|ref|ZP_04459989.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229841915|ref|ZP_04462071.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229896792|ref|ZP_04511955.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Pestoides A]
 gi|229904681|ref|ZP_04519792.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Nepal516]
 gi|270488391|ref|ZP_06205465.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27]
 gi|81825677|sp|Q663Q8|ATPB_YERPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573782|sp|Q1C095|ATPB_YERPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122979850|sp|Q1CCH5|ATPB_YERPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123776436|sp|Q7CFM8|ATPB_YERPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222427|sp|A4TSJ3|ATPB_YERPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990376|sp|A7FPE0|ATPB_YERP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740695|sp|B2K847|ATPB_YERPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740696|sp|A9R5T9|ATPB_YERPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740697|sp|B1JRN2|ATPB_YERPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21961151|gb|AAM87677.1|AE014015_2 membrane-bound ATP synthase, F1 sector, beta-subunit [Yersinia
           pestis KIM 10]
 gi|45438621|gb|AAS64167.1| ATP synthase beta subunit protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51591533|emb|CAH23205.1| ATP synthase beta subunit protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108777786|gb|ABG20305.1| ATP synthase beta subunit protein [Yersinia pestis Nepal516]
 gi|108782069|gb|ABG16127.1| ATP synthase beta subunit protein [Yersinia pestis Antiqua]
 gi|115349708|emb|CAL22689.1| ATP synthase beta subunit protein [Yersinia pestis CO92]
 gi|145212848|gb|ABP42255.1| ATP synthase beta subunit protein [Yersinia pestis Pestoides F]
 gi|149290353|gb|EDM40430.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125]
 gi|152960006|gb|ABS47467.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis IP
           31758]
 gi|162353887|gb|ABX87835.1| ATP synthase F1, beta subunit [Yersinia pestis Angola]
 gi|165912093|gb|EDR30733.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921978|gb|EDR39155.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991494|gb|EDR43795.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205660|gb|EDR50140.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958233|gb|EDR55254.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167048994|gb|EDR60402.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055540|gb|EDR65333.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752964|gb|ACA70482.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis YPIII]
 gi|186700494|gb|ACC91123.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis PB1/+]
 gi|229678799|gb|EEO74904.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Nepal516]
 gi|229691254|gb|EEO83307.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229696196|gb|EEO86243.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700230|gb|EEO88266.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Pestoides A]
 gi|270336895|gb|EFA47672.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27]
 gi|320017455|gb|ADW01027.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 460

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +    I  + P        +   +TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|270158437|ref|ZP_06187094.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968]
 gi|289166724|ref|YP_003456862.1| H+-transporting ATP synthase beta chain [Legionella longbeachae
           NSW150]
 gi|269990462|gb|EEZ96716.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968]
 gi|288859897|emb|CBJ13883.1| putative H+-transporting ATP synthase beta chain [Legionella
           longbeachae NSW150]
          Length = 458

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D    +G  +    I  K P   ++   ++  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPVDEAGPIG-AEEHWSIHRKPPTYEDQAGSQELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGVEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E       +   + R++E +DI  I G
Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKDIIAILG 377


>gi|220927730|ref|YP_002504639.1| F0F1 ATP synthase subunit beta [Clostridium cellulolyticum H10]
 gi|254808141|sp|B8I579|ATPB_CLOCE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219998058|gb|ACL74659.1| ATP synthase F1, beta subunit [Clostridium cellulolyticum H10]
          Length = 465

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + +    + I  + P    ++   +  +TGI+V+D+  P   G
Sbjct: 87  LGRIFNVLGEPVDKAGPV-EPTAYLPIHREAPSLEEQRPSTEILETGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216
            +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   D + D+  ++K
Sbjct: 146 GKIGLFGGAGVGKTVLIMELIRNIATEHGGYSIFTGVGERTREGNDLWHD-MNDSGVIEK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++   G 
Sbjct: 205 TAMVFGQMNEPPGARMRVGLTGLTMAEYFRDQMGQDVLLFIDNIFRFVQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD  
Sbjct: 265 IPSAVGYQPTLATDVGALQERI--ASTNKGSITSVQAVYVPADDLTDPAPATTFAHLDAT 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            VL+R +   G YP VDPL S SR+ D     +E   ++  +  ++ R +E +DI  I G
Sbjct: 323 TVLSRDIVAMGIYPAVDPLESTSRILDPKVVGEEHYTIARKVQEILQRNKELQDIIAILG 382


>gi|260886479|ref|ZP_05897742.1| ATP synthase F1, beta subunit [Selenomonas sputigena ATCC 35185]
 gi|330839673|ref|YP_004414253.1| ATP synthase subunit beta [Selenomonas sputigena ATCC 35185]
 gi|260863622|gb|EEX78122.1| ATP synthase F1, beta subunit [Selenomonas sputigena ATCC 35185]
 gi|329747437|gb|AEC00794.1| ATP synthase subunit beta [Selenomonas sputigena ATCC 35185]
          Length = 470

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 159/302 (52%), Gaps = 9/302 (2%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           AC  GRV N LG+ +D + +      S  I    P    ++   +  +TGI+V+D+  P 
Sbjct: 87  AC-LGRVFNVLGRTVDHNPAPVGNKESWPIHRPAPKFDEQETSTQILETGIKVVDLIAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +      +
Sbjct: 146 SRGGKIGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 DKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R +AE G YP VDPL S SR+ D      D  ++   +  ++ +++E +DI  I
Sbjct: 324 ATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGEDHYEVARGVQAVLQKYKELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|149188271|ref|ZP_01866565.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
 gi|148837860|gb|EDL54803.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
          Length = 461

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+   S EI    P   ++    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGQPIDECGPIGE-QASYEIHRPAPSYEDQSNSTELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E      ++   + R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPQIIGQEHYDTAQAVQKTLQRYKELKDIIAILG 380


>gi|150398119|ref|YP_001328586.1| F0F1 ATP synthase subunit beta [Sinorhizobium medicae WSM419]
 gi|190358705|sp|A6UDM1|ATPB_SINMW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150029634|gb|ABR61751.1| ATP synthase F1, beta subunit [Sinorhizobium medicae WSM419]
          Length = 509

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L K      I    P  +++    +   TGI+V+D+  P   G
Sbjct: 122 LGRIMNVIGEPVDEAGPL-KTSARRAIHQDAPAYVDQSTEAQILVTGIKVVDLLAPYAKG 180

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     +
Sbjct: 181 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 239

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 240 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEQFRDEGQDVLFFVDNIFRFTQAGSEV 299

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 300 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 357

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 358 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQGTLQRYKALQD 417

Query: 389 IRLIGG 394
           I  I G
Sbjct: 418 IIAILG 423


>gi|112791344|gb|ABI21942.1| ATP synthase beta subunit [Shigella dysenteriae]
          Length = 421

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNYQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354


>gi|221141622|ref|ZP_03566115.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|302751984|gb|ADL66161.1| ATP synthase subunit beta, AtpB [Staphylococcus aureus subsp.
           aureus str. JKD6008]
          Length = 470

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVACDVQSTLQKYRELQDIIAILG 385


>gi|270264094|ref|ZP_06192361.1| ATP synthase subunit beta [Serratia odorifera 4Rx13]
 gi|270041743|gb|EFA14840.1| ATP synthase subunit beta [Serratia odorifera 4Rx13]
          Length = 460

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 158/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   +    +   +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRPAPSYEDLANSQDLLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|170293999|gb|ACB13093.1| ATP synthase beta subunit [Prasinococcus capsulatus]
          Length = 367

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 162/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           AC  GR+ N LG+P+D   ++     S  I  + P  +        F+TGI+V+D+  P 
Sbjct: 18  ACTLGRIFNVLGEPVDEQGNVDSTTTS-PIHRRAPEFVELDTKLSIFETGIKVVDLLAPY 76

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI--------- 206
             G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           
Sbjct: 77  RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYQEMKESKVI 136

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            ED LGD+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 137 DEDNLGDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFVDNIFRFVQ 194

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 195 AGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPA 252

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382
             +  + LD   VL+R+LA +G YP VDPL S S +  + W   E    ++  +   + R
Sbjct: 253 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTML-QPWIVGEVHYAAAQGVKQTLQR 311

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 312 YKELQDIIAILG 323


>gi|290473116|ref|YP_003465977.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289172410|emb|CBJ79177.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 460

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PID    +G+ +    I    P        ++  +TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVLGDPIDMKGEIGEEE-RWSIHRTAPSYEELSSSQELLETGIKVMDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|197286889|ref|YP_002152761.1| F0F1 ATP synthase subunit beta [Proteus mirabilis HI4320]
 gi|227354878|ref|ZP_03839293.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
 gi|226740661|sp|B4F0E7|ATPB_PROMH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194684376|emb|CAR46024.1| ATP synthase beta chain [Proteus mirabilis HI4320]
 gi|227165031|gb|EEI49867.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
          Length = 460

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 17/336 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  + +S G  V   G    +       GR++N LG PID      KG++  E
Sbjct: 51  IVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDM-----KGEIETE 105

Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  + P        ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R
Sbjct: 106 ERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 165

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +
Sbjct: 166 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 225

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 226 TMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 283

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 284 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 343

Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             D      E   V+  +  ++ R++E +DI  I G
Sbjct: 344 QLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|15607015|ref|NP_214397.1| F0F1 ATP synthase subunit beta [Aquifex aeolicus VF5]
 gi|3913128|sp|O67828|ATPB_AQUAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2984264|gb|AAC07790.1| ATP synthase F1 beta subunit [Aquifex aeolicus VF5]
          Length = 478

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 179/338 (52%), Gaps = 16/338 (4%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149
           G  +I       GR+ N  G+PID    +   +     M + PP +  Q  + +  +TGI
Sbjct: 87  GPIKIPVGKEVLGRIFNVAGQPIDEQGPVEAKEYWP--MFRNPPELVEQSTKVEILETGI 144

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE- 204
           +VID+  P+  G ++G+F G+G+GK+ L+       AR      V++  VGER RE  + 
Sbjct: 145 KVIDLLQPIIKGGKVGLFGGAGVGKTVLMQELIHNIARFHEGYSVVVG-VGERTREGNDL 203

Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
           ++E      L  +V+V    +E P +R     T +T+AEYF   +G +VL+ +D+I RF 
Sbjct: 204 WLEMKESGVLPYTVMVYGQMNEPPGVRFRVAHTGLTMAEYFRDVEGQDVLIFIDNIFRFV 263

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++T  G LP A GY  ++ +++  + ERI  +  +KG+ITA+ +V V  D+  DP
Sbjct: 264 QAGAEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSITAIQAVYVPADDITDP 321

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              S+ + LD   VL R LAE G YP +DPL S S+ LA +    +  ++   +  ++ R
Sbjct: 322 APWSIFAHLDATTVLTRRLAELGIYPAIDPLESTSKYLAPEYVGEEHYEVAMEVKRILQR 381

Query: 383 FEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQ 419
           ++E ++I  I G     D   DKA V++   I  FL Q
Sbjct: 382 YKELQEIIAILGMEELSD--EDKAIVNRARRIQKFLSQ 417


>gi|148252986|ref|YP_001237571.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. BTAi1]
 gi|190358216|sp|A5EBX1|ATPB2_BRASB RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|146405159|gb|ABQ33665.1| membrane-bound ATP synthase, F1 sector, beta-subunit
           [Bradyrhizobium sp. BTAi1]
          Length = 476

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/267 (37%), Positives = 144/267 (53%), Gaps = 9/267 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++NA+GKP D    L    +   I +   PA+NR    +  F TGI+VID+  PL  
Sbjct: 94  LGRLLNAVGKPADRGPELPPSTVFRPIHASA-PALNRLGASQEIFHTGIKVIDLLAPLVK 152

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +  +F G+G+GK+ L+    R+       IS+   +GER RE  E  +E      L +
Sbjct: 153 GGKAAMFGGAGVGKTVLIMELIRTTVERYSGISVFAGIGERSREGHELLLELKQSGVLPR 212

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R  A LTA+TIAE+F   + +NVLL++D++ R   +  E++   G 
Sbjct: 213 TALVFGQMNEPPGARWRAGLTALTIAEHFRDVQHENVLLLIDNVYRLVQAGGEVSGLLGR 272

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP   GY  ++ SE+  L ERI  +      IT++ +V V  D+  DP    + S LD  
Sbjct: 273 LPSRVGYQPTLASEIAELQERI--ASVAGAAITSIQAVYVPADDFTDPAVAEIFSHLDSS 330

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD 362
           IVL+R +A E  YP VDPLAS S L D
Sbjct: 331 IVLSRQMASEAMYPAVDPLASSSTLLD 357


>gi|170699474|ref|ZP_02890517.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10]
 gi|170135623|gb|EDT03908.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10]
          Length = 464

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + +   +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESATTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|82889062|gb|ABB92854.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
 gi|82889066|gb|ABB92855.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
 gi|82889068|gb|ABB92856.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
 gi|82889075|gb|ABB92858.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
          Length = 310

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 160/298 (53%), Gaps = 21/298 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   G
Sbjct: 18  GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 76

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 77  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +  
Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
             S LD   VL+R +AE G YP VDPL S S+ L+ +    +  K+ S +  ++  ++
Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYKVASEVKRILQTYK 310


>gi|78486502|ref|YP_392427.1| F0F1 ATP synthase subunit beta [Thiomicrospira crunogena XCL-2]
 gi|118573773|sp|Q31DM0|ATPB_THICR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78364788|gb|ABB42753.1| ATP synthase F1, beta subunit [Thiomicrospira crunogena XCL-2]
          Length = 459

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ + LG PID    + + +  M I    P        ++  +TG++VID+  P   G
Sbjct: 82  LGRIFDVLGNPIDNAGPV-ESEEKMTIHRPAPAFDELAASQELLETGVKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +      L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYYEMEESGVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AEYF  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 201 ALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ ++ ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLSQEMGQIQERI--TSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           LNRS+AE G YP +DPL S SR  D      E       +   + R++E +DI  I G
Sbjct: 319 LNRSIAETGIYPAIDPLDSTSRQLDPLVVGSEHYDTARGVQETLQRYKELKDIIAILG 376


>gi|119355899|ref|YP_910543.1| F0F1 ATP synthase subunit beta [Chlorobium phaeobacteroides DSM
           266]
 gi|166201696|sp|A1BCJ2|ATPB_CHLPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119353248|gb|ABL64119.1| ATP synthase F1 subcomplex beta subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 462

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PIDG  S+     +  I    P         + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGDPIDGRGSVHTSK-TYSIHRSAPKFDELSTKTEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +    + + VGER RE  +   + +    + K+
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT ++IAEYF  + + +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI     +KG++T+V ++ V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGELQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     D+      ++  ++ R+++ +DI  I G
Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQILQRYKDLQDIIAILG 381


>gi|283958883|ref|ZP_06376328.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|283789601|gb|EFC28424.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
          Length = 470

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|51244686|ref|YP_064570.1| F0F1 ATP synthase subunit beta [Desulfotalea psychrophila LSv54]
 gi|81826892|sp|Q6AQ10|ATPB_DESPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|50875723|emb|CAG35563.1| probable ATP synthase, beta chain (AtpB) [Desulfotalea psychrophila
           LSv54]
          Length = 471

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+DG   +     SM I    P    +    +  +TGI+VID+  P   G 
Sbjct: 94  GRIMNVVGRPVDGLGPI-PAKTSMSIHRDAPLFTEQDTEVRVLETGIKVIDLLVPFPLGG 152

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G GK+ ++     +       IS+   VGER RE  +   +      L K+ 
Sbjct: 153 KMGLFGGAGCGKTVIMMEMVNNIAMHHGGISVFCGVGERTREGNDLYNEMKESGVLPKAA 212

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V     E P  R    LT +T AEYF   +G +VL  +D+I RF  +  E++   G +P
Sbjct: 213 LVYGQMTEPPGARARVALTGLTAAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIP 272

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ ++L  L ERI  +   KG+ITAV  V V  D+  DP   +  + LDG +V
Sbjct: 273 SAVGYQPTLATDLGALQERI--TSTNKGSITAVQCVYVPADDLTDPAPATTFAHLDGTVV 330

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           L+R ++E G YP VDPL S SR+ D     +E   V+    + + ++++ +DI  I G
Sbjct: 331 LSRQISELGIYPAVDPLDSTSRILDPNVIGEEHYDVARGVQVSLQKYKDLQDIIAILG 388


>gi|283471320|emb|CAQ50531.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 470

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|254476168|ref|ZP_05089554.1| ATP synthase F1, beta subunit [Ruegeria sp. R11]
 gi|214030411|gb|EEB71246.1| ATP synthase F1, beta subunit [Ruegeria sp. R11]
          Length = 474

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +   + +  I    P   ++    +   TGI+VID+  P  
Sbjct: 84  ATLGRILNVVGEPVDEQGPVVAAE-TRAIHQPAPEFSDQSTESEVLVTGIKVIDLLAPYA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VLNR+++E G YP VDPL S SRL D +   +E  K+ S +  ++ R++
Sbjct: 319 ATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPSIVGEEHYKVASDVQQILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|18033065|gb|AAL56974.1|AF326326_1 ATP synthase [Pasteurella multocida subsp. multocida]
 gi|18033067|gb|AAL56975.1|AF326327_1 ATP synthase [Pasteurella multocida subsp. gallicida]
 gi|18033069|gb|AAL56976.1|AF326328_1 ATP synthase [Pasteurella multocida subsp. gallicida]
 gi|18033071|gb|AAL56977.1|AF326329_1 ATP synthase [Pasteurella multocida subsp. septica]
          Length = 431

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHG 161
           GR++N LG+PID    +G  +     + + PP+   Q    +  +TGI+VID+  P   G
Sbjct: 72  GRIMNVLGEPIDEQGEIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAKG 129

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 130 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 189

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 190 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 249

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 250 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 307

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 308 LSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 365


>gi|258407029|ref|ZP_05680179.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9763]
 gi|257841362|gb|EEV65806.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9763]
          Length = 470

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|329729255|gb|EGG65663.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           21193]
          Length = 470

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|312437479|gb|ADQ76550.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 470

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|319650867|ref|ZP_08005004.1| F0F1 ATP synthase subunit beta [Bacillus sp. 2_A_57_CT2]
 gi|317397465|gb|EFV78166.1| F0F1 ATP synthase subunit beta [Bacillus sp. 2_A_57_CT2]
          Length = 473

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+ ID D ++   D   + + +  P   +   E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGESIDLDPAI-PADARRDSIHREAPKFEQLSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    LT +T+AE+F   +G +VL  +D+I RF  +  E++   
Sbjct: 209 KKTAMVFGQMNEPPGARMRVALTGLTMAEFFRDDQGQDVLFFMDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGKLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L+E G YP VDPLAS SR L+ +    +   +   +   + R+ E +DI  I
Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQRYRELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|269203739|ref|YP_003283008.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           ED98]
 gi|262076029|gb|ACY12002.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           ED98]
          Length = 470

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|145301172|ref|YP_001144013.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166201688|sp|A4STP3|ATPB_AERS4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|142853944|gb|ABO92265.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 462

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P   ++       +TGI+VID+  P   G
Sbjct: 87  LGRIMNVLGEPIDEKGPIGEEE-RWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  + +  N L K 
Sbjct: 146 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 206 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 265

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 266 SAVGYQPTLAEEMGVLQERI--TSTRTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 323

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E  +    +  ++ R++E +DI  I G
Sbjct: 324 LSRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHYETARGVQTVLQRYKELKDIIAILG 381


>gi|331004505|ref|ZP_08327975.1| ATP synthase subunit beta [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330410683|gb|EGG90106.1| ATP synthase subunit beta [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 463

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 9/294 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID  +   K +  + I  K P    +    +  +TGI+V+D+  P   G
Sbjct: 88  LGRIFNVLGEVIDKKEP-PKVEEYLPIHRKAPSFEEQSTQTEILETGIKVVDLLCPYQKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +   +      + K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMTDSGVINKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  +G  +VLL +D+I RF  +  E++   G +
Sbjct: 207 TMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
           VL+RS+ E G YP VDPL S SR+       +E   V+  +  ++ +++E +DI
Sbjct: 325 VLDRSIVEMGIYPAVDPLGSTSRILSPHIVGEEHYQVAQRVQEVLQKYKELQDI 378


>gi|307731459|ref|YP_003908683.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1003]
 gi|323527841|ref|YP_004229994.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1001]
 gi|307585994|gb|ADN59392.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1003]
 gi|323384843|gb|ADX56934.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1001]
          Length = 464

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 167/330 (50%), Gaps = 12/330 (3%)

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           IC +G  + +  G +V + G+   +       GR+++ LG+PID    +   ++   I  
Sbjct: 58  IC-LGASDGLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIASDNMR-SIHQ 115

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDC 186
           K P         +  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+   
Sbjct: 116 KAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHG 175

Query: 187 FDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              V    VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE+F
Sbjct: 176 GYSVFAG-VGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHF 234

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G
Sbjct: 235 RDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTG 292

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D   
Sbjct: 293 SITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNV 352

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +E   +   +   + R++E RDI  I G
Sbjct: 353 IGEEHYSITRGVQQTLQRYKELRDIIAILG 382


>gi|291518502|emb|CBK73723.1| ATP synthase F1 subcomplex beta subunit [Butyrivibrio fibrisolvens
           16/4]
          Length = 466

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG  +DG ++L   +     + + PP    Q  V +  +TGI+VID+  P   G
Sbjct: 88  GRLFNVLGDTLDGGENLDSAEHWS--IHREPPTFEEQSPVVEMLETGIKVIDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +     I + VGER RE  +   +      L K+
Sbjct: 146 GKVGLFGGAGVGKTVLIQELIHNIATESGGYSIFTGVGERSREGNDLWTEMAESGVLDKT 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 206 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVKNQDVLLFIDNIFRFVQAGSEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ ++L  L ERI  ++   G+IT+V +V V  D+  DP   +  S LD   
Sbjct: 266 PSAVGYQPTLANDLGELQERIASTKN--GSITSVQAVYVPADDLTDPAPATTFSHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ +     +E       +  ++ +++E +DI  I G
Sbjct: 324 VLSRKIVEQGIYPAVDPLESTSRILEPDVVGEEHYNTARGVQEILQKYKELQDIIAILG 382


>gi|300910439|ref|ZP_07127891.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|300888281|gb|EFK83472.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 470

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|15925093|ref|NP_372627.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927677|ref|NP_375210.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283756|ref|NP_646844.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49484327|ref|YP_041551.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486896|ref|YP_044117.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652125|ref|YP_186910.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           COL]
 gi|82751704|ref|YP_417445.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus RF122]
 gi|87160880|ref|YP_494704.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196007|ref|YP_500820.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148268554|ref|YP_001247497.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394618|ref|YP_001317293.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           JH1]
 gi|151222219|ref|YP_001333041.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980418|ref|YP_001442677.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510310|ref|YP_001575969.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253315771|ref|ZP_04838984.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253731059|ref|ZP_04865224.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733063|ref|ZP_04867228.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006891|ref|ZP_05145492.2| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257426242|ref|ZP_05602657.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428900|ref|ZP_05605294.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431509|ref|ZP_05607882.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257434218|ref|ZP_05610568.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257437131|ref|ZP_05613171.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257793861|ref|ZP_05642840.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9781]
 gi|258422051|ref|ZP_05684968.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9719]
 gi|258433580|ref|ZP_05688653.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9299]
 gi|258440475|ref|ZP_05690645.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A8115]
 gi|258445683|ref|ZP_05693861.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6300]
 gi|258450137|ref|ZP_05698232.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6224]
 gi|258453187|ref|ZP_05701178.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A5948]
 gi|258453408|ref|ZP_05701390.1| ATP synthase F1, beta subunit [Staphylococcus aureus A5937]
 gi|262049270|ref|ZP_06022145.1| ATP synthase subunit B [Staphylococcus aureus D30]
 gi|262052606|ref|ZP_06024800.1| ATP synthase subunit B [Staphylococcus aureus 930918-3]
 gi|282894747|ref|ZP_06302973.1| ATP synthase F1, beta subunit [Staphylococcus aureus A8117]
 gi|282904772|ref|ZP_06312646.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906447|ref|ZP_06314298.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909416|ref|ZP_06317231.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911668|ref|ZP_06319467.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914952|ref|ZP_06322732.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917452|ref|ZP_06325205.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920281|ref|ZP_06328005.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923091|ref|ZP_06330776.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9765]
 gi|282925492|ref|ZP_06333146.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282929027|ref|ZP_06336612.1| ATP synthase F1, beta subunit [Staphylococcus aureus A10102]
 gi|283771271|ref|ZP_06344160.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus H19]
 gi|293509020|ref|ZP_06667807.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510935|ref|ZP_06669634.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547537|ref|ZP_06672212.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294850073|ref|ZP_06790810.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|295407033|ref|ZP_06816835.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295428690|ref|ZP_06821316.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296275418|ref|ZP_06857925.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297210076|ref|ZP_06926469.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246032|ref|ZP_06929889.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297589830|ref|ZP_06948470.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|304379284|ref|ZP_07362023.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54036785|sp|P63680|ATPB_STAAW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|54036794|sp|P99112|ATPB_STAAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|54040855|sp|P63679|ATPB_STAAM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|60389598|sp|Q6G7K7|ATPB_STAAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|60389623|sp|Q6GEX2|ATPB_STAAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81170378|sp|Q5HE97|ATPB_STAAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573754|sp|Q2FF24|ATPB_STAA3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573755|sp|Q2FWF0|ATPB_STAA8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573756|sp|Q2YUK1|ATPB_STAAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222418|sp|A7X4U3|ATPB_STAA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|172048985|sp|A6QIU7|ATPB_STAAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081349|sp|A6U3I8|ATPB_STAA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081350|sp|A5IUP8|ATPB_STAA9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081351|sp|A8YY70|ATPB_STAAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|13701897|dbj|BAB43189.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus N315]
 gi|14247876|dbj|BAB58265.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205198|dbj|BAB95892.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus MW2]
 gi|49242456|emb|CAG41172.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245339|emb|CAG43814.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286311|gb|AAW38405.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           COL]
 gi|82657235|emb|CAI81676.1| ATP synthase beta chain [Staphylococcus aureus RF122]
 gi|87126854|gb|ABD21368.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203565|gb|ABD31375.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741623|gb|ABQ49921.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947070|gb|ABR53006.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375019|dbj|BAF68279.1| ATP synthase, beta subunit [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722553|dbj|BAF78970.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369119|gb|ABX30090.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating
           F-type ATPase beta subunit [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253725186|gb|EES93915.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728971|gb|EES97700.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257270947|gb|EEV03120.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274242|gb|EEV05759.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277750|gb|EEV08420.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257280857|gb|EEV11002.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283524|gb|EEV13651.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257787833|gb|EEV26173.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9781]
 gi|257841951|gb|EEV66383.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9719]
 gi|257849311|gb|EEV73290.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9299]
 gi|257852544|gb|EEV76462.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A8115]
 gi|257855522|gb|EEV78459.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6300]
 gi|257856611|gb|EEV79517.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6224]
 gi|257859133|gb|EEV81990.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A5948]
 gi|257864389|gb|EEV87135.1| ATP synthase F1, beta subunit [Staphylococcus aureus A5937]
 gi|259159476|gb|EEW44526.1| ATP synthase subunit B [Staphylococcus aureus 930918-3]
 gi|259162635|gb|EEW47202.1| ATP synthase subunit B [Staphylococcus aureus D30]
 gi|269941702|emb|CBI50109.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus TW20]
 gi|282312893|gb|EFB43294.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316141|gb|EFB46522.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318654|gb|EFB49011.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321155|gb|EFB51486.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324433|gb|EFB54746.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326686|gb|EFB56984.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330397|gb|EFB59915.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282589333|gb|EFB94425.1| ATP synthase F1, beta subunit [Staphylococcus aureus A10102]
 gi|282593282|gb|EFB98279.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9765]
 gi|282594805|gb|EFB99782.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282762835|gb|EFC02969.1| ATP synthase F1, beta subunit [Staphylococcus aureus A8117]
 gi|283459476|gb|EFC06569.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus H19]
 gi|285817767|gb|ADC38254.1| ATP synthase beta chain [Staphylococcus aureus 04-02981]
 gi|290919657|gb|EFD96730.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094724|gb|EFE24996.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466220|gb|EFF08747.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|294823021|gb|EFG39453.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|294968058|gb|EFG44085.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295127360|gb|EFG57000.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296885276|gb|EFH24216.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177031|gb|EFH36286.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297576958|gb|EFH95672.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695377|gb|ADI98599.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus ED133]
 gi|302333749|gb|ADL23942.1| ATP synthase subunit beta, AtpB [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|304342143|gb|EFM08043.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312830455|emb|CBX35297.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128774|gb|EFT84774.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315193268|gb|EFU23666.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315196963|gb|EFU27305.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140725|gb|EFW32577.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143701|gb|EFW35478.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323439348|gb|EGA97072.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus O11]
 gi|323442443|gb|EGB00072.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus O46]
 gi|329314788|gb|AEB89201.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723987|gb|EGG60511.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726363|gb|EGG62831.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           21172]
          Length = 470

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|332163550|ref|YP_004300127.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318608057|emb|CBY29555.1| ATP synthase beta chain [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325667780|gb|ADZ44424.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 435

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P   +    +   +TGI+V+D+  P   G
Sbjct: 60  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|170087348|ref|XP_001874897.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650097|gb|EDR14338.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 540

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 163/308 (52%), Gaps = 18/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + KG     I +  PP +++    +  +TGI+V+D+  P  
Sbjct: 151 ATLGRIMNVIGEPIDERGPI-KGVKLCPIHADPPPFVDQSTTAEVLETGIKVVDLLAPYA 209

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE----D 208
            G +IG+F G+G+GK+ L+     +        S+   VGER RE      E IE    +
Sbjct: 210 RGGKIGLFGGAGVGKTVLIQELINNVAKAHGGFSIFCGVGERTREGNDLYHEMIETGVIN 269

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
             GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  
Sbjct: 270 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGS 327

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 328 EVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPAT 385

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +AE G YP VDPL S SR+ D      E   + +++  ++  ++  
Sbjct: 386 TFAHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPRIVGQEHYDVATAVQKILQDYKSL 445

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 446 QDIIAILG 453


>gi|325576871|ref|ZP_08147486.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325161077|gb|EGC73195.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 457

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  + +  I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEQGEIG-AEENWSIHRPAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|212640520|ref|YP_002317040.1| F0F1 ATP synthase subunit beta [Anoxybacillus flavithermus WK1]
 gi|226739973|sp|B7GMF3|ATPB_ANOFW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|212562000|gb|ACJ35055.1| F0F1-type ATP synthase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 473

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 172/331 (51%), Gaps = 17/331 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+PID  + +   D   + + +  P   +   + +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGEPIDLGEEI-PADARRDAIHRPAPKFEQLSTQVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +  E++   
Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L+E G YP VDPLAS SR L+ +    +  ++   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + ++    VH+   I  FL Q+
Sbjct: 387 ----LGMDELSEEDKLVVHRARRIQFFLSQN 413


>gi|225851226|ref|YP_002731460.1| ATP synthase F1, beta subunit [Persephonella marina EX-H1]
 gi|225646035|gb|ACO04221.1| ATP synthase F1, beta subunit [Persephonella marina EX-H1]
          Length = 455

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 162/296 (54%), Gaps = 13/296 (4%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR ++  G PID    LG  K ++   +  K P     +   +  +TGI+++D+  P  
Sbjct: 83  LGRTLDIFGNPID---RLGEIKSNIEYPVYRKAPEITEGREEREILETGIKIVDLLVPFV 139

Query: 160 HGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLG-DNLK 215
            G ++G+F G+G+GK+ LL+  +F      + V I + VGER RE  E   +    D LK
Sbjct: 140 KGGKVGLFGGAGVGKTVLLTEFIFRMVKIHEGVSIFAGVGERIREAHELWHELKRLDVLK 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +++   +E P +R  A   A++IAEYF   K  +VLL++D+I R+A +  E++T  G
Sbjct: 200 RTTLILGQMNEPPGIRAKAIFPALSIAEYFRDEKNTDVLLLIDNIFRYAQAGMEVSTLLG 259

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           +LP   GY  ++  E+  + ERI  +  + G+IT+V ++ V  D+  DP   S  + LD 
Sbjct: 260 KLPARAGYQPTLKEEIAVVEERI--TSTKSGSITSVQAIYVPADDITDPAPSSTFAHLDS 317

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDI 389
            ++L+R  A +G YP +DPL S +++ D      E   V++L  + + R+ +  DI
Sbjct: 318 TVILSRERAAKGFYPAIDPLESRTKVLDPDIVGHEHYEVANLVRYHLQRYRDLEDI 373


>gi|157368257|ref|YP_001476246.1| F0F1 ATP synthase subunit beta [Serratia proteamaculans 568]
 gi|166990375|sp|A8G7M8|ATPB_SERP5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157320021|gb|ABV39118.1| ATP synthase F1, beta subunit [Serratia proteamaculans 568]
          Length = 460

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 158/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+PID      KGD+  E    I    P   +    +   +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRPAPSYEDLANSQDLLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|307299330|ref|ZP_07579131.1| ATP synthase F1, beta subunit [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915126|gb|EFN45512.1| ATP synthase F1, beta subunit [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 473

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID    +   D   EI    P   ++Q   +  +TGI+VID+  P   G
Sbjct: 93  LGRMFNLLGEPIDEKGEVKFSD-HWEIHRAAPSVTDQQTEVEILETGIKVIDLLAPFSKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG   G+G+GK+ L+    R+   ++  +S+   VGER RE  +   D      ++ +
Sbjct: 152 GKIGFSGGAGVGKTVLVMELIRNFAIEQKGLSVFAGVGERTREGNDLWLDMQEAGVIENT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+A+T+AEYF   +  +VL+ +D+I RF  +  E++   G +
Sbjct: 212 ALVFGQMNEPPGARFRVGLSAITMAEYFRDVQKKDVLVFIDNIFRFVQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +    G+IT+V ++ V  D+  DP   +  S LD  +
Sbjct: 272 PSAVGYQPTLATEMGNLQERI--TSTRSGSITSVQAIYVPADDFTDPAPATTFSHLDATV 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+RS+AE+G YP VDPL S S+  D      E  ++   +  ++ R+++ +DI  I G
Sbjct: 330 NLSRSIAEQGLYPAVDPLDSTSKNLDPVVVGQEHYQVARRVQEVLQRYKDLQDIIAILG 388


>gi|256387197|gb|ACU80599.1| ATP synthase beta subunit [Xenoturbella bocki]
          Length = 335

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 163/314 (51%), Gaps = 19/314 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I   A   GR++N +G+PID           + I    P        ++   TGI+V+D+
Sbjct: 13  IPVGAETLGRIMNVIGEPIDERGPFAA-TTKLGIHQDAPEFTEMSVEQEILVTGIKVVDL 71

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFI 206
             P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E I
Sbjct: 72  LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMI 130

Query: 207 E----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           E    D  GDN K S+V     +E P  R    LT +T+AEYF  ++G +VLL +D+I R
Sbjct: 131 EGGVIDLKGDNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDAEGQDVLLFIDNIFR 189

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  
Sbjct: 190 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVYVPADDLT 247

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+R +AE G YP VDPL S SR+ D+    DE   V+  +  ++
Sbjct: 248 DPAPATTFAHLDATTVLSRGIAELGFYPAVDPLDSSSRILDRNIVGDEHYNVTRGVQKIL 307

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 308 QDYKSLQDIIAILG 321


>gi|15603359|ref|NP_246433.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|17372630|sp|Q9CKW1|ATPB_PASMU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12721878|gb|AAK03578.1| AtpD [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 457

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCH 160
            GR++N LG+PID    +G  +     + + PP+   Q    +  +TGI+VID+  P   
Sbjct: 82  LGRIMNVLGEPIDEQGEIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAK 139

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K
Sbjct: 140 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDK 199

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +
Sbjct: 200 VSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 259

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 260 PSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTV 317

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 318 VLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 376


>gi|301155216|emb|CBW14681.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           parainfluenzae T3T1]
          Length = 457

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 16/302 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR++N LG+PID      KGD+  E    I    P    +    +  +TGI+VID+  P
Sbjct: 82  LGRIMNVLGEPIDE-----KGDIGAEENWAIHRPAPSYEEQSNSTELLETGIKVIDLICP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N 
Sbjct: 137 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNV 196

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   
Sbjct: 197 LDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALL 256

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 257 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
             +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I
Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAI 374

Query: 393 GG 394
            G
Sbjct: 375 LG 376


>gi|289706358|ref|ZP_06502716.1| ATP synthase F1, beta subunit [Micrococcus luteus SK58]
 gi|289556853|gb|EFD50186.1| ATP synthase F1, beta subunit [Micrococcus luteus SK58]
          Length = 485

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG+ +D   S  + +    I    P   + +   +  +TGI+VID+ TP   G 
Sbjct: 105 GHIFNVLGETLDMPSSQLQAEDRWPIHRPAPNFASLEGSTEMLETGIKVIDLLTPYIKGG 164

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    D LK + 
Sbjct: 165 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMDEADVLKDTA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF+ +  E++T  G +P
Sbjct: 225 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +V + LD    
Sbjct: 285 SAVGYQPNLADEMGVLQERI--TSTRGHSITSMQAVYVPADDYTDPAPANVFAHLDATTN 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L R LA  G YP VDPLAS SR+ D  +   D   +   +  ++ + +E +DI  I G
Sbjct: 343 LTRDLASRGLYPAVDPLASTSRILDPQYVGQDHYDVAIRVKQILQKNKELQDIIAILG 400


>gi|34500018|gb|AAQ73591.1| ATP synthase beta subunit [Bisgaard Taxon 7]
          Length = 444

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 16/301 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPL 158
           GR++N LG+PID      KG +  E    + + PP+   Q    +  +TGI+VID+  P 
Sbjct: 83  GRIMNVLGEPIDE-----KGPIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLVCPF 137

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L
Sbjct: 138 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSDSNVL 197

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G
Sbjct: 198 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLG 257

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 258 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDS 315

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D     +E   V+  +  ++ R++E +DI  I 
Sbjct: 316 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGILQRYKELKDIIAIL 375

Query: 394 G 394
           G
Sbjct: 376 G 376


>gi|238797873|ref|ZP_04641365.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969]
 gi|238718289|gb|EEQ10113.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969]
          Length = 447

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G
Sbjct: 72  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 130

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 131 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 190

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 191 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 250

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 251 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 308

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 309 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 366


>gi|71370818|gb|AAZ30638.1| ATP synthase beta subunit [Amphiporus angulatus]
          Length = 427

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 163/319 (51%), Gaps = 19/319 (5%)

Query: 89  HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           H  R  + P     GR+IN +G+PID    +   D    I ++ P  +     ++   TG
Sbjct: 53  HPIRIPVGPETL--GRIINVIGEPIDERGPV-PTDKRASIPAEAPEFVEMSVQQEILATG 109

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE   
Sbjct: 110 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 168

Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
              E IE     L D+  K  +V    +E P  R    LT +T+AEYF   KG +VLL +
Sbjct: 169 LYHEMIESGVINLKDSSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQKGQDVLLFI 228

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V 
Sbjct: 229 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVP 286

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     DE   +   
Sbjct: 287 ADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPHIVGDEHYGIARG 346

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  +   +DI  I G
Sbjct: 347 VQKILQDYRSLQDIIAILG 365


>gi|67924174|ref|ZP_00517617.1| ATP synthase F1, beta subunit [Crocosphaera watsonii WH 8501]
 gi|67853990|gb|EAM49306.1| ATP synthase F1, beta subunit [Crocosphaera watsonii WH 8501]
          Length = 483

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 166/323 (51%), Gaps = 16/323 (4%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+V       +       GR+ N LG+P+D    +G  + S  I    P   + +   K 
Sbjct: 80  DIVDSGSPISVPVGKATLGRIFNVLGEPVDEMGDVGNEETS-PIHRPAPKLTDLETKPKV 138

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
           F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +S+   VGER RE
Sbjct: 139 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFAGVGERTRE 198

Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
                 E IE  +   +NL +S   +V    +E P  R    L+ +T+AEYF      +V
Sbjct: 199 GNDLYNEMIESKVINPENLSESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDV 258

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +
Sbjct: 259 LLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 316

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +   +   DE   
Sbjct: 317 VYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGDEHYD 376

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
              ++   + R++E +DI  I G
Sbjct: 377 TARAVQSTLQRYKELQDIIAILG 399


>gi|320407247|gb|ADW27399.1| ATP synthase beta subunit [Spiochaetopterus sp. THS-2011]
          Length = 369

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 164/316 (51%), Gaps = 19/316 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +      M I  + P  ++    ++  +TGI+V+
Sbjct: 54  IRIPVGRETLGRIINVIGEPIDERGPV-NAKAQMAIHQEAPDFVDMSVEQEILETGIKVV 112

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 113 DLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLXHE 171

Query: 205 FIE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
            I+    D  GDN K S V     +E P  R    LT +TIAEYF  ++G +VLL +D+I
Sbjct: 172 MIQTGVIDLKGDNSKVSXVY-GQMNEPPGARARVCLTGLTIAEYFRDAEGQDVLLFIDNI 230

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+
Sbjct: 231 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 288

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTH 378
             DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     A+   +   +  
Sbjct: 289 LTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGAEHYNIARGVQK 348

Query: 379 LIHRFEETRDIRLIGG 394
           ++   +  +DI  I G
Sbjct: 349 ILQDHKSLQDIIAILG 364


>gi|284025137|ref|ZP_06379535.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           132]
          Length = 470

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID  + +    +  + + +  PA +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +KK
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I G
Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385


>gi|291165819|gb|EFE27867.1| ATP synthase F1, beta subunit [Filifactor alocis ATCC 35896]
          Length = 465

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 165/317 (52%), Gaps = 11/317 (3%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D +   G   +       GR+ N LG+PID    L +G+     + + PPA   Q+    
Sbjct: 71  DAIDTGGAISVPVGKNTLGRIFNLLGQPIDEAGDLEEGE--KWPIHRDPPAYEEQQTNAE 128

Query: 145 -FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGR 200
             +TGI+VID+  P   G +IG+F G+G+GK+ ++     +       +S+   VGER R
Sbjct: 129 ILETGIKVIDLICPYQKGGKIGLFGGAGVGKTVIIMELINNIAKQHGGLSVFTGVGERTR 188

Query: 201 EVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
           E  + + E      L K+ +V    +E P  R    LT +T+AEYF  + G +VLL +D+
Sbjct: 189 EGNDLYYEMKESGVLDKTALVFGQMNEPPGARMRVGLTGLTMAEYFRDRAGQDVLLFIDN 248

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D
Sbjct: 249 IFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTQKGSITSVQAVYVPAD 306

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLT 377
           +  DP   +  + LD   VL+R +A  G YP VDPL S SR L+ +    +  ++   + 
Sbjct: 307 DLTDPAPATTFAHLDATTVLSRQIASLGIYPAVDPLDSTSRILSPEVVGEEHYEVARGVQ 366

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ + ++ +DI  I G
Sbjct: 367 SILQKMKDLQDIIAILG 383


>gi|237814345|ref|YP_002898796.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346]
 gi|254184023|ref|ZP_04890614.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
 gi|184214555|gb|EDU11598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
 gi|237504492|gb|ACQ96810.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346]
          Length = 463

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|163737805|ref|ZP_02145222.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis BS107]
 gi|163742889|ref|ZP_02150273.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis 2.10]
 gi|161383853|gb|EDQ08238.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis 2.10]
 gi|161389331|gb|EDQ13683.1| ATP synthase subunit beta [Phaeobacter gallaeciensis BS107]
          Length = 474

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 164/310 (52%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +   + +  I    P   ++    +   TGI+VID+  P  
Sbjct: 84  ATLGRILNVVGEPVDEQGPVVAAE-TRAIHQPAPEFSDQSTESEVLVTGIKVIDLLAPYA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            +  + LD   VLNRS++E G YP VDPL S SRL D +   +E   V+S +  ++ R++
Sbjct: 319 ATTFAHLDATTVLNRSISELGIYPAVDPLDSTSRLMDPSIVGEEHYAVASDVQQILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|52843175|ref|YP_096974.1| F0F1 ATP synthase subunit beta [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295820|ref|YP_128235.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Lens]
 gi|54298986|ref|YP_125355.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Paris]
 gi|148361322|ref|YP_001252529.1| ATP synthase F1 subunit beta [Legionella pneumophila str. Corby]
 gi|296108663|ref|YP_003620364.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
           2300/99 Alcoy]
 gi|81822284|sp|Q5WSG8|ATPB_LEGPL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81822477|sp|Q5X0P3|ATPB_LEGPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81823315|sp|Q5ZRA1|ATPB_LEGPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201715|sp|A5III3|ATPB_LEGPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|52630286|gb|AAU29027.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|53752771|emb|CAH14206.1| hypothetical protein lpp3053 [Legionella pneumophila str. Paris]
 gi|53755652|emb|CAH17154.1| hypothetical protein lpl2910 [Legionella pneumophila str. Lens]
 gi|148283095|gb|ABQ57183.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
           [Legionella pneumophila str. Corby]
 gi|295650565|gb|ADG26412.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
           2300/99 Alcoy]
 gi|307611866|emb|CBX01582.1| hypothetical protein LPW_32691 [Legionella pneumophila 130b]
          Length = 458

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D D      + +  I  K P    +   ++  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPVD-DAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E       +   + R++E +DI  I G
Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKDIIAILG 377


>gi|152972641|ref|YP_001337787.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238897239|ref|YP_002921987.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae NTUH-K2044]
 gi|262040363|ref|ZP_06013609.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330005181|ref|ZP_08305143.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3]
 gi|166201714|sp|A6TG36|ATPB_KLEP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150957490|gb|ABR79520.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238549569|dbj|BAH65920.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042304|gb|EEW43329.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328536387|gb|EGF62746.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3]
          Length = 460

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGQPVDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|110835587|ref|YP_694446.1| F0F1 ATP synthase subunit beta [Alcanivorax borkumensis SK2]
 gi|118573503|sp|Q0VKX4|ATPB_ALCBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110648698|emb|CAL18174.1| ATP synthase, beta subunit [Alcanivorax borkumensis SK2]
          Length = 460

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G+ +  M I    P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEAGPIGEEE-RMPIHRAAPTYADQAATNELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  + 
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVS 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP +DPL S SR  D      E   +   +  ++ RF+E +DI  I G
Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKDIIAILG 377


>gi|53721003|ref|YP_109989.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei K96243]
 gi|53724016|ref|YP_104462.1| F0F1 ATP synthase subunit beta [Burkholderia mallei ATCC 23344]
 gi|76809634|ref|YP_331595.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1710b]
 gi|83718763|ref|YP_443800.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264]
 gi|121599585|ref|YP_994634.1| F0F1 ATP synthase subunit beta [Burkholderia mallei SAVP1]
 gi|126439925|ref|YP_001060961.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 668]
 gi|126448967|ref|YP_001082535.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10247]
 gi|126455115|ref|YP_001068261.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1106a]
 gi|134281409|ref|ZP_01768117.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
 gi|217424098|ref|ZP_03455598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
 gi|226193310|ref|ZP_03788920.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
           9]
 gi|238561567|ref|ZP_00441840.2| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
 gi|242317222|ref|ZP_04816238.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
 gi|251767098|ref|ZP_04819956.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20]
 gi|254174689|ref|ZP_04881350.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
 gi|254186488|ref|ZP_04893005.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194697|ref|ZP_04901128.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
 gi|254261967|ref|ZP_04953021.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
 gi|254298703|ref|ZP_04966154.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
 gi|81823891|sp|Q62FR5|ATPB1_BURMA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|81824616|sp|Q63PI0|ATPB1_BURPS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|118573514|sp|Q3JXV8|ATPB1_BURP1 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|118573516|sp|Q2STE9|ATPB1_BURTA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358205|sp|A3MQJ9|ATPB1_BURM7 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358206|sp|A1V8T1|ATPB1_BURMS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358207|sp|A3P0Z0|ATPB1_BURP0 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358208|sp|A3NF40|ATPB1_BURP6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|52211417|emb|CAH37408.1| ATP synthase beta chain [Burkholderia pseudomallei K96243]
 gi|52427439|gb|AAU48032.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 23344]
 gi|76579087|gb|ABA48562.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710b]
 gi|83652588|gb|ABC36651.1| ATP synthase F1, beta subunit [Burkholderia thailandensis E264]
 gi|121228395|gb|ABM50913.1| ATP synthase F1, beta subunit [Burkholderia mallei SAVP1]
 gi|126219418|gb|ABN82924.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 668]
 gi|126228757|gb|ABN92297.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106a]
 gi|126241837|gb|ABO04930.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10247]
 gi|134247076|gb|EBA47162.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
 gi|157808477|gb|EDO85647.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
 gi|157934173|gb|EDO89843.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|160695734|gb|EDP85704.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
 gi|169651447|gb|EDS84140.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
 gi|217393161|gb|EEC33183.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
 gi|225934910|gb|EEH30887.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
           9]
 gi|238524340|gb|EEP87773.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
 gi|242140461|gb|EES26863.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
 gi|243063944|gb|EES46130.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20]
 gi|254220656|gb|EET10040.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
          Length = 464

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382


>gi|126002169|ref|XP_001352282.1| ATPsyn-beta [Drosophila pseudoobscura pseudoobscura]
 gi|195173595|ref|XP_002027573.1| GL18400 [Drosophila persimilis]
 gi|54640128|gb|EAL29273.1| ATPsyn-beta [Drosophila pseudoobscura pseudoobscura]
 gi|194114485|gb|EDW36528.1| GL18400 [Drosophila persimilis]
          Length = 506

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR++N +G+PID    +   D +  I ++ P  +     ++   TGI+V+
Sbjct: 110 IRIPVGAETLGRIMNVIGEPIDERGPI-PTDKTAPIHAEAPEFIEMSVEQEILVTGIKVV 168

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 228 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 406 LQDYKSLQDIIAILG 420


>gi|266624715|ref|ZP_06117650.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
 gi|288863414|gb|EFC95712.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
          Length = 463

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 21/300 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVEKG-FKTGIRVIDIF 155
            GR+ N LG PID            E+   +P     P    Q  E    +TGI+V+D+ 
Sbjct: 89  LGRIFNVLGDPIDNKPK-------PEVKEYLPIHRPAPTFEEQSTETEILETGIKVVDLL 141

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLG 211
            P   G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  + + E    
Sbjct: 142 CPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYYEMQES 201

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++
Sbjct: 202 GVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQAGKDVLLFIDNIFRFTQAGSEVS 261

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 262 ALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFA 319

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R++ E G YP VDPL S SR+ D     +E   V+  +  ++ +++E +DI
Sbjct: 320 HLDATTVLSRAIVELGIYPAVDPLESTSRILDPRIVGEEHYNVARGVQEVLQKYKELQDI 379


>gi|167576938|ref|ZP_02369812.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis TXDOH]
          Length = 395

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 12/270 (4%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFA 182
           I    PP   ++     F TGI+VID+  PL  G +  +F G+G+GK+ L+     +M  
Sbjct: 17  IHRGAPPLAEQKSATALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVE 76

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           R       + + +GER RE  E + D  G   L ++V+V    +E P  R   PLTA+ I
Sbjct: 77  RYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAI 134

Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF   +  NVLL++D++ RF  +  E++   G LP   GY  ++ SE+  L ERI  +
Sbjct: 135 AEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--A 192

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             E   +TA+ +V V  D+  DP   ++ + +D  +VL+R++A EG YP +DP+AS S L
Sbjct: 193 SVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSIL 252

Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            D     +    V+  +  +I  + E +D+
Sbjct: 253 LDPLVVGEAHVEVAIEVRRVIEHYRELQDV 282


>gi|112791350|gb|ABI21945.1| ATP synthase beta subunit [Klebsiella pneumoniae]
          Length = 421

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGQPVDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|1073879|pir||D64071 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           Haemophilus influenzae (strain Rd KW20)
          Length = 468

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID   ++G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 93  LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 152 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 212 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 271

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 272 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 330 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 387


>gi|261867032|ref|YP_003254954.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412364|gb|ACX81735.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 457

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEQGPIGEEE-RWSIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKDIIAILG 376


>gi|170694320|ref|ZP_02885474.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
 gi|170140743|gb|EDT08917.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
          Length = 464

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D+   I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382


>gi|167036417|ref|YP_001671648.1| F0F1 ATP synthase subunit beta [Pseudomonas putida GB-1]
 gi|189081339|sp|B0KRA8|ATPB_PSEPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166862905|gb|ABZ01313.1| ATP synthase F1, beta subunit [Pseudomonas putida GB-1]
          Length = 458

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 168/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G D+V       +       GR+++ LG PID    +G+ +    
Sbjct: 49  VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGE-EERRG 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P   ++       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 108 IHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAM 167

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G++VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               +E       + +++ R++E +DI  I G
Sbjct: 346 NVIGNEHYDTARGVQYVLQRYKELKDIIAILG 377


>gi|91783932|ref|YP_559138.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400]
 gi|123062814|sp|Q13XV3|ATPB1_BURXL RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|91687886|gb|ABE31086.1| ATP synthase F1, beta subunit [Burkholderia xenovorans LB400]
          Length = 496

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  G   D   +L        I    PP  + +     F TGI+VID+  PL  G 
Sbjct: 102 GRLLDVTGATRDDGPALPAQIERRPIHRAAPPLASLKGTSTLFSTGIKVIDLLAPLAQGG 161

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +  +F G+G+GK+ L+   + A  + ++ + + + VGER RE  E + D      L ++V
Sbjct: 162 KAAMFGGAGVGKTVLVMELIHAVVERYEGISVFAGVGERSREGHEMLLDMRTSGVLPRTV 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R   P TA+TIAEYF   +  NVLL++D++ RF  +  E++   G +P
Sbjct: 222 LVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +E+  L ERI        ++TA+ +V V  D+  DP   ++ + LD  +V
Sbjct: 282 SRVGYQPTLATEVASLQERI--VSVGGVSVTAIEAVYVPADDFTDPAVTAIAAHLDSMVV 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
           L+RS+A EG YP VDP+AS S L D     +E   V++ +  +I  + E +D+
Sbjct: 340 LSRSMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRIIEHYRELQDV 392


>gi|71370914|gb|AAZ30686.1| ATP synthase beta subunit [Haliotis rufenscens]
          Length = 427

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +   + +  I ++ P  ++    ++  +TGI+V+
Sbjct: 55  IRIPVGPKTLGRIINVIGEPIDERGPVETENFAA-IHAEAPEFVDMNVQQEILETGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
                   L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDMEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     DE   +   +  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGDEHYGIARGVQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 351 LQDYKSLQDIIAILG 365


>gi|27375551|ref|NP_767080.1| F0F1 ATP synthase subunit beta [Bradyrhizobium japonicum USDA 110]
 gi|81842025|sp|Q89X74|ATPB_BRAJA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27348688|dbj|BAC45705.1| ATP synthase beta chain [Bradyrhizobium japonicum USDA 110]
          Length = 477

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 160/317 (50%), Gaps = 19/317 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR+IN +G+PID    + K +    I  + P   ++    +   TGI+V+D
Sbjct: 78  RVPVGEGTLGRIINVIGEPIDEAGPV-KSEGLRAIHQEAPTYTDQSTEAEILVTGIKVVD 136

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      EFI
Sbjct: 137 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 196

Query: 207 EDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           E  +  +          K  +V    +E P  R    LT +TIAE F  KG +VL  +D+
Sbjct: 197 ESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDN 256

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D
Sbjct: 257 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPAD 314

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377
           +  DP   +  + LD    L+RS+AE+G YP VDPL S SR+       +E   V+  + 
Sbjct: 315 DLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPLVVGEEHYAVARQVQ 374

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ R++  +DI  I G
Sbjct: 375 QVLQRYKALQDIIAILG 391


>gi|112791348|gb|ABI21944.1| ATP synthase beta subunit [Salmonella sp. ICMP 15669]
          Length = 421

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354


>gi|15616638|ref|NP_239850.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681397|ref|YP_002467782.1| ATP synthase subunit B [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219681953|ref|YP_002468337.1| ATP synthase subunit B [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471070|ref|ZP_05635069.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11131216|sp|P57124|ATPB_BUCAI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808135|sp|B8D8H3|ATPB_BUCA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808136|sp|B8D6S7|ATPB_BUCAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|25290462|pir||H84930 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain
           [imported] - Buchnera sp. (strain APS)
 gi|10038701|dbj|BAB12736.1| ATP synthase beta chain [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621686|gb|ACL29842.1| ATP synthase subunit B [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624240|gb|ACL30395.1| ATP synthase subunit B [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311085758|gb|ADP65840.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086335|gb|ADP66416.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311086910|gb|ADP66990.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087501|gb|ADP67580.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 465

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 173/338 (51%), Gaps = 16/338 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G    +  G +V   G + ++       GR+IN LG+ ID   +L K + S +
Sbjct: 51  VVRTIAMGSSNGLKRGLIVTDLGHYIKVPVGEATLGRIINVLGETIDNKGAL-KNNQSDK 109

Query: 128 I----MSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           I    + + PP+   Q    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    
Sbjct: 110 IEYWEIHRSPPSYRDQASCREILETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELI 169

Query: 183 RSDCFDKV---IISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLT 237
           R+   +     + + VGER RE  +F  + + D+  L K  +V    +E P  R     T
Sbjct: 170 RNIAVEHSGYSVFTGVGERTREGNDFYHE-MNDSQVLDKVSLVYGQMNEPPGNRLRVAFT 228

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +TIAE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI
Sbjct: 229 GLTIAEKFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI 288

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  + G+IT+V +V V  D+  DP   +  + LD  + L+R +A  G YP +DPL S 
Sbjct: 289 --TSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAIDPLNST 346

Query: 358 SRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           SR  D     DE  +    +  ++ R++E +DI  I G
Sbjct: 347 SRQLDPYIVGDEHYETALGVQSILQRYQELKDIIAILG 384


>gi|238793102|ref|ZP_04636730.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909]
 gi|238727475|gb|EEQ19001.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G
Sbjct: 60  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|238783022|ref|ZP_04627049.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970]
 gi|238716023|gb|EEQ08008.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G
Sbjct: 60  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|228478238|ref|ZP_04062846.1| ATP synthase F1, beta subunit [Streptococcus salivarius SK126]
 gi|312864308|ref|ZP_07724542.1| ATP synthase F1, beta subunit [Streptococcus vestibularis F0396]
 gi|322517276|ref|ZP_08070153.1| ATP synthase F1 sector beta subunit [Streptococcus vestibularis
           ATCC 49124]
 gi|228249917|gb|EEK09187.1| ATP synthase F1, beta subunit [Streptococcus salivarius SK126]
 gi|311100309|gb|EFQ58518.1| ATP synthase F1, beta subunit [Streptococcus vestibularis F0396]
 gi|322124106|gb|EFX95645.1| ATP synthase F1 sector beta subunit [Streptococcus vestibularis
           ATCC 49124]
          Length = 468

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +           I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR        +E   V++ +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385


>gi|157144366|ref|YP_001451685.1| F0F1 ATP synthase subunit beta [Citrobacter koseri ATCC BAA-895]
 gi|166201697|sp|A8ACN6|ATPB_CITK8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157081571|gb|ABV11249.1| hypothetical protein CKO_00070 [Citrobacter koseri ATCC BAA-895]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|158524732|gb|ABW71260.1| mitochondrial ATP synthase beta subunit [Novocrania anomala]
          Length = 428

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 16/289 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    + K D  + I +  P  ++    ++   TGI+V+
Sbjct: 55  IRIPVGPETLGRIINVIGEPIDERGEV-KTDKYLSIHADAPEFVDMNVAQEILVTGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MIESGVISLKDKSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGEE 339


>gi|326203255|ref|ZP_08193120.1| ATP synthase F1, beta subunit [Clostridium papyrosolvens DSM 2782]
 gi|325986513|gb|EGD47344.1| ATP synthase F1, beta subunit [Clostridium papyrosolvens DSM 2782]
          Length = 464

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +     +   + +  P++  QR      +TGI+V+D+  P   
Sbjct: 87  LGRIFNVLGEPVDKAGPVTP--TAYLPIHREAPSLEEQRPSTEILETGIKVVDLLAPYAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LK 215
           G +IG+F G+G+GK+ L+    R+   +     I + VGER RE  +   D + D+  ++
Sbjct: 145 GGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSIFTGVGERTREGNDLWHD-MNDSGVIE 203

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++   G
Sbjct: 204 KTAMVFGQMNEPPGARMRVGLTGLTMAEYFRDQMGQDVLLFIDNIFRFVQAGSEVSALLG 263

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 264 RIPSAVGYQPTLATDVGALQERI--ASTNKGSITSVQAVYVPADDLTDPAPATTFAHLDA 321

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
             VL+R +   G YP VDPL S SR+ D     +E   V+  +  ++ R +E +DI  I 
Sbjct: 322 TTVLSRDIVAMGIYPAVDPLESTSRILDPKVVGEEHYAVARRVQEILQRNKELQDIIAIL 381

Query: 394 G 394
           G
Sbjct: 382 G 382


>gi|117619208|ref|YP_858679.1| F0F1 ATP synthase subunit beta [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166201687|sp|A0KQX8|ATPB_AERHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117560615|gb|ABK37563.1| ATP synthase F1, beta subunit [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 462

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I    P   ++       +TGI+VID+  P   G
Sbjct: 87  LGRIMNVLGDPIDEKGPIGEEE-RWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  + +  N L K 
Sbjct: 146 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 206 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 265

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 266 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 323

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E  +    +  ++ R++E +DI  I G
Sbjct: 324 LSRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHYETARGVQTVLQRYKELKDIIAILG 381


>gi|323137978|ref|ZP_08073052.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242]
 gi|322396697|gb|EFX99224.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242]
          Length = 478

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 22/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+IN +G+P+D    L   +     + +  P+   Q  E    +TGI+V+D+  P   
Sbjct: 88  LGRIINVIGEPVDEAGPLVTAN--KRAIHQPAPSYAEQATEAQILETGIKVVDLLAPYAK 145

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL--GDNL 214
           G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  G N 
Sbjct: 146 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVNK 204

Query: 215 K---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           K         K+ +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +
Sbjct: 205 KPVNGSAAGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP  
Sbjct: 265 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+RS+AE+G YP VDPL S SR+   A   +E  ++   +   + R++
Sbjct: 323 ATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAIVGEEHYEVARKVQSTLQRYK 382

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 383 SLQDIIAILG 392


>gi|296157535|ref|ZP_06840370.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1]
 gi|295892307|gb|EFG72090.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1]
          Length = 464

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D+   I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   ++  +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYAITRGVQQTLQRYKELRDIIAILG 382


>gi|149183570|ref|ZP_01861992.1| F0F1 ATP synthase subunit beta [Bacillus sp. SG-1]
 gi|148848711|gb|EDL62939.1| F0F1 ATP synthase subunit beta [Bacillus sp. SG-1]
          Length = 472

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID ++ + K      I  + P         +  +TGI+V+D+  P  
Sbjct: 89  VTLGRVFNVLGETIDLEEEIDKSARRDPIHREAPKFDQLSTEVEILETGIKVVDLLAPYI 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   + + D+  +
Sbjct: 149 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSVFAGVGERTREGNDLYHE-MSDSGVI 207

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 208 KKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFVDNIFRFTQAGSEVSALL 267

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +++ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 268 GRMPSAVGYQPTLATDMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L+E G YP VDPLAS SR L+ +    +   +   +   + R++E +DI  I
Sbjct: 326 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYNVARQVQQTLQRYKELQDIIAI 385

Query: 393 GG 394
            G
Sbjct: 386 LG 387


>gi|328885072|emb|CCA58311.1| ATP synthase beta chain [Streptomyces venezuelae ATCC 10712]
          Length = 480

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 172/327 (52%), Gaps = 15/327 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+ ++ D+S         I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 101 GRVFNTLGQVLNADESTVADAPRWTIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREF-IEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R +   D V + + VGER RE  +  +E      L K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIVRVAKLHDGVSVFAGVGERTREGNDLMVEMEEAGVLDKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + A D     + +  ++ ++++ +DI  I    
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYDAATRVKGILQKYKDLQDIIAI---- 394

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 395 LGIDELSEEDKLVVHRARRVERFLSQN 421


>gi|300916399|ref|ZP_07133139.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1]
 gi|300416303|gb|EFJ99613.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|238787862|ref|ZP_04631659.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641]
 gi|238724205|gb|EEQ15848.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G
Sbjct: 60  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|124383817|ref|YP_001027567.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10229]
 gi|167582834|ref|ZP_02375708.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis TXDOH]
 gi|167620974|ref|ZP_02389605.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis Bt4]
 gi|167721822|ref|ZP_02405058.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei DM98]
 gi|167740794|ref|ZP_02413568.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 14]
 gi|167818009|ref|ZP_02449689.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 91]
 gi|167826372|ref|ZP_02457843.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 9]
 gi|167847891|ref|ZP_02473399.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei B7210]
 gi|167896448|ref|ZP_02483850.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 7894]
 gi|167904850|ref|ZP_02492055.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei NCTC
           13177]
 gi|167913128|ref|ZP_02500219.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 112]
 gi|167921065|ref|ZP_02508156.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BCC215]
 gi|254206873|ref|ZP_04913224.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
 gi|254357427|ref|ZP_04973701.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
 gi|190358265|sp|A2S6J8|ATPB_BURM9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|124291837|gb|ABN01106.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10229]
 gi|147752415|gb|EDK59481.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
 gi|148026491|gb|EDK84576.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
          Length = 459

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377


>gi|254201537|ref|ZP_04907901.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
 gi|147747431|gb|EDK54507.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
          Length = 469

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 94  GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 152

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 212 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 271

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 330 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 387


>gi|126656480|ref|ZP_01727741.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110]
 gi|126622166|gb|EAZ92873.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110]
          Length = 483

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +G  + S  I    P         K F+TGI+VID+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDEMGDVGNEETS-PIHRPAPKLTELSTKPKVFETGIKVIDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  +  
Sbjct: 154 QGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFAGVGERTREGNDLYNEMIESKVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL +S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 PDNLSESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R+LA +G YP VDPL S S +       DE      ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPNIVGDEHYDTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|4388534|emb|CAA75478.1| F1-ATP synthase, beta subunit [Sorghum bicolor]
          Length = 454

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 164/313 (52%), Gaps = 25/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      +GD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 80  ATLGRIINVIGEPIDE-----RGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 134

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE 
Sbjct: 135 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 194

Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
               LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF
Sbjct: 195 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 254

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 255 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 312

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++ 
Sbjct: 313 PAPATTYAHLDATTVLSRQISERGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQ 372

Query: 382 RFEETRDIRLIGG 394
           +++  +DI  I G
Sbjct: 373 KYKNLQDIIAILG 385


>gi|242241509|ref|ZP_04795954.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis W23144]
 gi|242235052|gb|EES37363.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis W23144]
 gi|319399587|gb|EFV87842.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis FRI909]
          Length = 470

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D+ +        I  + P         +  +TGI+V+D+  P  
Sbjct: 87  VTLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  S   KG++T++ +V V  D++ DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR  + +    E   V+  +   + ++ E +DI  I
Sbjct: 324 STTNLERKLTEMGIYPAVDPLASTSRALEPSVVGQEHYDVAREVQSTLQKYRELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|226952190|ref|ZP_03822654.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244]
 gi|294648871|ref|ZP_06726327.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837028|gb|EEH69411.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244]
 gi|292825262|gb|EFF84009.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC
           19194]
          Length = 464

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 161/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVATEE-RLPIHREAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A +G YP +DPL S SR  D      E  ++  S+ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|220927118|ref|YP_002502420.1| F0F1 ATP synthase subunit beta [Methylobacterium nodulans ORS 2060]
 gi|219951725|gb|ACL62117.1| ATP synthase F1, beta subunit [Methylobacterium nodulans ORS 2060]
          Length = 484

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 162/320 (50%), Gaps = 23/320 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151
            R+   A   GR++N +G+PID    +     S   + +  P    Q  E     TGI+V
Sbjct: 86  IRVPVGANTLGRIMNVIGEPIDEAGEIAAE--SYRAIHQPAPTYAEQSTEAQILVTGIKV 143

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203
           +D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      
Sbjct: 144 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAG-VGERTREGNDLYH 202

Query: 204 EFIEDYLGDNLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           E IE  +  + K        K  +V    +E P  R    LT +T+AE+F  +G +VL  
Sbjct: 203 EMIESKVNMDPKEHGSAEGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDEGQDVLFF 262

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V
Sbjct: 263 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYV 320

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374
             D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+       +E   V+ 
Sbjct: 321 PADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPTILGEEHYNVAR 380

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +  ++ R++  +DI  I G
Sbjct: 381 RVQQVLQRYKALQDIIAILG 400


>gi|112791342|gb|ABI21941.1| ATP synthase beta subunit [Shigella flexneri]
 gi|112791346|gb|ABI21943.1| ATP synthase beta subunit [Escherichia coli DSM 30083]
          Length = 421

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354


>gi|332764011|gb|EGJ94248.1| ATP synthase F1, beta subunit [Shigella flexneri 2930-71]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFTHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354


>gi|309784443|ref|ZP_07679082.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617]
 gi|308927950|gb|EFP73418.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354


>gi|295098944|emb|CBK88033.1| ATP synthase F1 subcomplex beta subunit [Eubacterium cylindroides
           T2-87]
          Length = 467

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 164/303 (54%), Gaps = 13/303 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157
              GR+ N LG+PIDG   LG+  D+  E + +  PA + Q  V    +TGI+VID+  P
Sbjct: 86  AILGRMFNVLGRPIDG---LGEVKDVEYEPIHRPAPAFDEQSTVSVPLETGIKVIDLLCP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   K ++  VGER RE  +   +      
Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVVGVGERTREGNDMYHEMKESGV 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272
           L K+V+V    +ESP  R    LT +T+AE+F  K   +VLL +D+I RF  +  E++  
Sbjct: 203 LDKTVLVYGQMNESPGARMRVGLTGLTMAEHFRDKEHQDVLLFIDNIFRFTQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+ +L ERI  +    G+IT+V ++ V  D+  DP   +  + L
Sbjct: 263 LGRVPSAVGYQPTLATEMGQLQERI--TSTNDGSITSVQAIYVPADDLTDPAPATAFTHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+R +A  G YP VDPL S SR+ D     +    V+  +  ++ R++E +DI  
Sbjct: 321 DAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGERHYNVARGVQSILQRYKELQDIIA 380

Query: 392 IGG 394
           I G
Sbjct: 381 ILG 383


>gi|258690474|gb|ACV87999.1| ATP synthase beta subunit [Suberites sp. KJP-2009]
          Length = 426

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 162/317 (51%), Gaps = 21/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            +I       GR++N +G+PID    + K ++   I ++ P  +     ++   TGI+V+
Sbjct: 54  IKIPVGPMTLGRIMNVIGEPIDERGPI-KAEMQAAIHAEAPEFVEMSTQQEILVTGIKVV 112

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFI 206
           D+  P   G +IG+F G+G+GK+ ++         A   C    + + VGER RE  +  
Sbjct: 113 DLLAPYAKGGKIGLFGGAGVGKTVVIMELINNVAHAHGGC---SVFAGVGERTREGNDLY 169

Query: 207 EDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
            +        L D+  K  +V    +E P  R    L+ +T+AEYF  K G +VLL +D+
Sbjct: 170 HEMIQGGVISLKDDTSKVALVYGQMNEPPGARARVALSGLTVAEYFRDKEGQDVLLFIDN 229

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D
Sbjct: 230 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTLKGSITSVQAVFVPAD 287

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D     +E   V+  T 
Sbjct: 288 DLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRIMDPNIVGEEHYNVARGTQ 347

Query: 379 -LIHRFEETRDIRLIGG 394
            ++  +   +DI  I G
Sbjct: 348 KILQDYRSLQDIIAILG 364


>gi|34500030|gb|AAQ73597.1| ATP synthase beta subunit [Pasteurella pneumotropica]
          Length = 444

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  + +  I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDERGEIG-AEENWSIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|56415733|ref|YP_152808.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364661|ref|YP_002144298.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81599724|sp|Q5PKX2|ATPB_SALPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740672|sp|B5BIN6|ATPB_SALPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56129990|gb|AAV79496.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096138|emb|CAR61734.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|54301816|ref|YP_131809.1| F0F1 ATP synthase subunit beta [Photobacterium profundum SS9]
 gi|81828635|sp|Q6LKZ6|ATPB2_PHOPR RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|46915236|emb|CAG22009.1| putative ATP synthase F1, beta subunit [Photobacterium profundum
           SS9]
          Length = 461

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+   S  I  + P   ++    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGQPIDECGEIGQ-KTSYPIHREPPSYEDQANSTELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +   KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTHKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      +   +   +  ++ R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGVEHYDVARGVQTVLQRYKELKDIIAILG 380


>gi|16762461|ref|NP_458078.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16767149|ref|NP_462764.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29143949|ref|NP_807291.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62182347|ref|YP_218764.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161505610|ref|YP_001572722.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|161616985|ref|YP_001590950.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168263239|ref|ZP_02685212.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464800|ref|ZP_02698692.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194444846|ref|YP_002043111.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450391|ref|YP_002047894.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471110|ref|ZP_03077094.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194734293|ref|YP_002116806.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251677|ref|YP_002148800.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197263502|ref|ZP_03163576.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198245365|ref|YP_002217811.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387213|ref|ZP_03213825.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928445|ref|ZP_03219644.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|207859088|ref|YP_002245739.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213052670|ref|ZP_03345548.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213427470|ref|ZP_03360220.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586049|ref|ZP_03367875.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213857970|ref|ZP_03384941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224585660|ref|YP_002639459.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238913118|ref|ZP_04656955.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289826259|ref|ZP_06545371.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|75505463|sp|Q57HX9|ATPB_SALCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81832703|sp|Q7CPE2|ATPB_SALTY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81849133|sp|Q8XGX4|ATPB_SALTI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081341|sp|A9MJR9|ATPB_SALAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081342|sp|A9MXA6|ATPB_SALPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740666|sp|B5EYZ6|ATPB_SALA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740667|sp|B5FN33|ATPB_SALDC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740668|sp|B5QUS4|ATPB_SALEP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740670|sp|B4TAX2|ATPB_SALHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740671|sp|B4SYD1|ATPB_SALNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740673|sp|B4TN31|ATPB_SALSV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808162|sp|C0Q2N2|ATPB_SALPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|25290439|pir||AF0954 ATP synthase beta chain [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16422439|gb|AAL22723.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|16504766|emb|CAD03130.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139585|gb|AAO71151.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62129980|gb|AAX67683.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|160866957|gb|ABX23580.1| hypothetical protein SARI_03786 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161366349|gb|ABX70117.1| hypothetical protein SPAB_04806 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403509|gb|ACF63731.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408695|gb|ACF68914.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457474|gb|EDX46313.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194709795|gb|ACF89016.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632484|gb|EDX50968.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197215380|gb|ACH52777.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197241757|gb|EDY24377.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197939881|gb|ACH77214.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604311|gb|EDZ02856.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204321878|gb|EDZ07076.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205348072|gb|EDZ34703.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710891|emb|CAR35255.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224470188|gb|ACN48018.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261249005|emb|CBG26863.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996152|gb|ACY91037.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301160397|emb|CBW19923.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914996|dbj|BAJ38970.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320088290|emb|CBY98051.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321222161|gb|EFX47234.1| ATP synthase beta chain [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322617222|gb|EFY14127.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619090|gb|EFY15976.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625157|gb|EFY21985.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322630208|gb|EFY26979.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634367|gb|EFY31101.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635251|gb|EFY31966.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642872|gb|EFY39457.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645076|gb|EFY41606.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650425|gb|EFY46837.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653617|gb|EFY49944.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661555|gb|EFY57778.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322661637|gb|EFY57856.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669799|gb|EFY65941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671992|gb|EFY68111.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322674997|gb|EFY71083.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683687|gb|EFY79700.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686074|gb|EFY82059.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716839|gb|EFZ08410.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323132227|gb|ADX19657.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323192009|gb|EFZ77246.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200503|gb|EFZ85581.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202732|gb|EFZ87769.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208309|gb|EFZ93250.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211744|gb|EFZ96577.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323218606|gb|EGA03313.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220007|gb|EGA04477.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224778|gb|EGA09043.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323232514|gb|EGA16616.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235289|gb|EGA19374.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323241077|gb|EGA25114.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323241374|gb|EGA25406.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323248604|gb|EGA32534.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252097|gb|EGA35957.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258599|gb|EGA42262.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262369|gb|EGA45927.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268206|gb|EGA51682.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270620|gb|EGA54065.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326625597|gb|EGE31942.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332990714|gb|AEF09697.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|302554177|ref|ZP_07306519.1| ATP synthase F1, beta subunit [Streptomyces viridochromogenes DSM
           40736]
 gi|302471795|gb|EFL34888.1| ATP synthase F1, beta subunit [Streptomyces viridochromogenes DSM
           40736]
          Length = 478

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 175/327 (53%), Gaps = 17/327 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D+S      S  I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 101 GKVFNTLGEVLNSDESYDGERWS--IHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R ++  + V + + VGER RE  + I +      L K+ 
Sbjct: 159 KIGLFGGAGVGKTVLIQEMIMRVANLHEGVSVFAGVGERTREGNDLIAEMEESGVLDKTA 218

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 279 SAVGYQPNLADEMGTLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATTV 336

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + SAD       + +++ ++++ +DI  I    
Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYISADHYNAAMRVKNILQKYKDLQDIIAI---- 392

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 393 LGIDELGEEDKLVVHRARRVERFLSQN 419


>gi|289677992|ref|ZP_06498882.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. syringae FF5]
          Length = 195

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 7/192 (3%)

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKG 305
           ++G  VLL+LDS+TRFA + REI   SGE P+ RG  P SV++ LPRL+ER G SE   G
Sbjct: 1   ARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--G 57

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+     
Sbjct: 58  SITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVT 117

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL 
Sbjct: 118 GREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLR 174

Query: 426 SEDVFQEITKKL 437
                QE   +L
Sbjct: 175 EPVPLQETLDRL 186


>gi|308234027|ref|ZP_07664764.1| ATP synthase F1, beta subunit [Atopobium vaginae DSM 15829]
 gi|328944381|ref|ZP_08241843.1| ATP synthase F1 sector beta subunit [Atopobium vaginae DSM 15829]
 gi|327490965|gb|EGF22742.1| ATP synthase F1 sector beta subunit [Atopobium vaginae DSM 15829]
          Length = 491

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 161/301 (53%), Gaps = 16/301 (5%)

Query: 103 GRVINALGKPIDGDDSLGKG---DLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GRV N +G+P+DG     KG   D+    +    PA +    +   F+TGI+ ID+  P 
Sbjct: 112 GRVWNVMGEPVDG-----KGIPSDVDYYPIHHPAPAFDELTTQTEIFETGIKSIDLLEPY 166

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNL 214
             G + G+F G+G+GK+ L+     +   +     + + VGER RE  + ++E      +
Sbjct: 167 VRGGKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMTESGVI 226

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K+ +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G
Sbjct: 227 NKTCLVYGQMNEPPGARLRVGLAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLG 286

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 287 RMPSAVGYQPTLATEMGDLQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDA 344

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VL+RS+ E G YP VDPLAS S   D +   +E  ++  ++  ++ ++ + +DI  I 
Sbjct: 345 TTVLSRSITELGIYPAVDPLASSSSALDPSIVGEEHYRVAMAVQEILQQYSDLQDIIAIL 404

Query: 394 G 394
           G
Sbjct: 405 G 405


>gi|291456007|ref|ZP_06595397.1| ATP synthase F1, beta subunit [Bifidobacterium breve DSM 20213]
 gi|291382416|gb|EFE89934.1| ATP synthase F1, beta subunit [Bifidobacterium breve DSM 20213]
          Length = 490

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 154/270 (57%), Gaps = 12/270 (4%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196

Query: 192 ISL---VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           +S+   VGER RE  + I + +G+   L+K+ +V    DE P  R   PLTA+T+AEYF 
Sbjct: 197 VSVFAGVGERTREGNDLIGE-MGEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFR 255

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     
Sbjct: 256 DVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGH 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  +
Sbjct: 314 SITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRY 373

Query: 366 SADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                 +  + +  ++ R +E +D I LIG
Sbjct: 374 VGQAHYECANRVKAILQRNKELQDIIALIG 403


>gi|212696102|ref|ZP_03304230.1| hypothetical protein ANHYDRO_00638 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676731|gb|EEB36338.1| hypothetical protein ANHYDRO_00638 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 457

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 178/354 (50%), Gaps = 23/354 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115
           +GQV++I+ + V +   G  ++ SL D+V  F      I  +    GR  N + +PID G
Sbjct: 40  IGQVVKIDDETVTVEVFGNTQDFSLNDIVVEFEEKPLEIPLNESILGRTFNGIARPIDDG 99

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            +       S+E     P A  R+      +TGI  IDI T L  GQ++ +F+GSG+  +
Sbjct: 100 GEIYSDKFYSVEGNPLNPVA--REYPRNFIQTGISSIDILTTLIRGQKLPIFSGSGMPHN 157

Query: 176 TLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227
            + +   R          CF   + + +G +  E   F + +    +K  VV+     + 
Sbjct: 158 EIAAQIVRQAKLKTNEDFCF---VFAAMGIKKDEAMFFEDAFTKAGVKDKVVMYENLADD 214

Query: 228 PILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           PI+ ++  P  A+T AEY +  K  +VL+I+  IT +A ++RE+++   E+P  +GYP  
Sbjct: 215 PIMERLITPKCALTAAEYLAFEKNKHVLVIITDITSYAEALREVSSIRQEVPSRKGYPGY 274

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           ++S+L  L ER G  E   G++T +  + +  D+   PI D    I +G IV++R L ++
Sbjct: 275 LYSDLASLYERAGMIEGVNGSVTLIPILTMPNDDITHPIPDLTGYITEGQIVIDRMLDQK 334

Query: 346 GRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           G YPP++ L S+SRL      +     D + L++ L     + +E R+I  I G
Sbjct: 335 GIYPPINVLPSLSRLMKDGIGEGYTRKDHEDLMNQLYESYSKVQEIRNISQIVG 388


>gi|91785733|ref|YP_560939.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400]
 gi|118573517|sp|Q13SQ2|ATPB2_BURXL RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|91689687|gb|ABE32887.1| ATP synthase F1 subcomplex beta subunit [Burkholderia xenovorans
           LB400]
          Length = 464

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D+   I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382


>gi|205354552|ref|YP_002228353.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|226740669|sp|B5RFW3|ATPB_SALG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|205274333|emb|CAR39357.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326629687|gb|EGE36030.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|170718139|ref|YP_001785168.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 2336]
 gi|226740206|sp|B0UWG5|ATPB_HAES2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|168826268|gb|ACA31639.1| ATP synthase F1, beta subunit [Haemophilus somnus 2336]
          Length = 457

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEKGEIGAEEY-WAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|242279704|ref|YP_002991833.1| F0F1 ATP synthase subunit beta [Desulfovibrio salexigens DSM 2638]
 gi|242122598|gb|ACS80294.1| alternate F1F0 ATPase, F1 subunit beta [Desulfovibrio salexigens
           DSM 2638]
          Length = 457

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 165/318 (51%), Gaps = 14/318 (4%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ GD+V   G   R        GRV+N  G P+DG D     D+    +   P  ++R+
Sbjct: 64  LARGDVVHCNGETLRTPVGEDLLGRVLNVFGDPVDGKDL--PSDVEFRSIHNQPIELSRR 121

Query: 140 RV-EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
            V E+ F TGI+VID+  PL  G + G+F G+G+GK+ L++    +       IS+   +
Sbjct: 122 VVSEEIFTTGIKVIDLLMPLEKGGKAGLFGGAGVGKTVLITELINNMVGAHSGISIFCGI 181

Query: 196 GERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNV 252
           GER RE  E   + +GD   L  +V+V    +E P  R     TA+TIAEYF   +G +V
Sbjct: 182 GERCREGEELYRE-MGDAGVLDNTVMVFGQMNEPPGARFRTGHTAMTIAEYFRDDQGKDV 240

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++D+I RF  +  E++   G LP   GY  ++ S+L  L ERI  S    G IT++ +
Sbjct: 241 LLLIDNIFRFIQAGMELSGLLGRLPSRMGYQPTLGSDLAELQERI--SSSSSGAITSIQA 298

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP A    S L   IVL+R  A EG YP VDPL S S +   A        
Sbjct: 299 VYVPADDLTDPAATHTFSHLSSSIVLSRKRAGEGFYPAVDPLESRSMMLSPAIVGQRHYD 358

Query: 373 VS-SLTHLIHRFEETRDI 389
           V+  +   + ++E+ +DI
Sbjct: 359 VAREVRRTLAQYEDLKDI 376


>gi|18253303|gb|AAL66415.1|AF368465_5 proton-translocating ATPase beta subunit [Streptococcus pneumoniae]
          Length = 468

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID +    +      I  K P         +  +TGI+VID+  P   G
Sbjct: 89  LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      ++K+
Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + L+   
Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLNSTT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L + G YP VDPLAS SR LA +    +   + + +  ++ R+ E +DI  I G
Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385


>gi|291460685|ref|ZP_06600075.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416644|gb|EFE90363.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 474

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 174/331 (52%), Gaps = 17/331 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           AC  GR+ N LG+P+D +    K +    I    P   ++    +  +TGI+V+D+  P 
Sbjct: 96  ACL-GRIFNLLGEPVD-EKPAPKTEERWAIHRPAPSFEDQTPATEILETGIKVVDLICPY 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      L
Sbjct: 154 AKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGISVFTGVGERTREGNDLYGEMKESGVL 213

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++   
Sbjct: 214 DKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDERNQDVLLFIDNIFRFTQAGSEVSALL 273

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD
Sbjct: 274 GRMPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLD 331

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R +A +G YP VDPL S SR L  +    +  ++  ++  ++ R++E +DI  I
Sbjct: 332 ATTVLSRDIASKGIYPAVDPLDSTSRILTPEVVGQEHYEIARAVQQVLQRYKELQDIIAI 391

Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
                G+D + ++    V++   I +FL QS
Sbjct: 392 ----MGMDELSEEDKITVYRARKIQNFLSQS 418


>gi|262199221|ref|YP_003270430.1| ATP synthase F1 subunit beta [Haliangium ochraceum DSM 14365]
 gi|262082568|gb|ACY18537.1| ATP synthase F1, beta subunit [Haliangium ochraceum DSM 14365]
          Length = 481

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 168/308 (54%), Gaps = 21/308 (6%)

Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLC 159
            GR++N +G P+DG   +  K  L++    + PP   +Q V  + F+TGI+VID+  P  
Sbjct: 95  LGRILNVVGDPVDGFGPIEAKERLAIH---RPPPVFTQQSVTVEAFETGIKVIDLLAPYR 151

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+     L++  A+     + + + VGER RE      E  +  L 
Sbjct: 152 RGGKIGLFGGAGVGKTVIIMELINNVAKKHG-GRSVFAGVGERTREGNDLWHEMNDSKLS 210

Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
           D    L+ + +V    +E P  R    L+A+TIAEYF   +  +VLL +D+I RF  +  
Sbjct: 211 DGSTVLQNAALVYGQMNEPPGARARVGLSALTIAEYFRDQEKQDVLLFVDNIFRFTQAGS 270

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+ +L ERI  +   +G+IT+V ++ V  D+  DP   +
Sbjct: 271 EVSALLGRIPSAVGYQPTLSTEMGQLQERI--TSTTEGSITSVQAIYVPADDLTDPAPAT 328

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VLNR+++E+G YP VDPL S S  L+         ++   +  ++ R+++ 
Sbjct: 329 AFAHLDATTVLNRAISEKGIYPAVDPLDSTSTILSPDVVGERHYRVAREVQQVLQRYKDL 388

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 389 QDIIAILG 396


>gi|114777383|ref|ZP_01452380.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1]
 gi|114552165|gb|EAU54667.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1]
          Length = 462

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 159/299 (53%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG  ID      + +    I  + P         +  +TGI+VID+  P+  G
Sbjct: 82  LGRIMNVLGTGIDFQGEAVECEERWAIHREPPRFEELAPASEILETGIKVIDLMAPIAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHGGFSVFAG-VGERTREGNDFYYEMKESNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AEYF  +G +VL+ +D+I R++ +  E++   G +
Sbjct: 201 VALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLIFIDNIYRYSLAGVEVSALLGRM 260

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  I
Sbjct: 261 PSAVGYQPTLAEEMGKLQERI--ASTKTGSITSVQAVYVPADDLTDPAPATTFAHLDSTI 318

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR  D K   ++   +  ++   + R++E +DI  I G
Sbjct: 319 VLSRQIAELGIYPAVDPLDSTSRQLDPKVVGSEHYDIAINVQQTLQRYKELQDIIAILG 377


>gi|187925863|ref|YP_001897505.1| F0F1 ATP synthase subunit beta [Burkholderia phytofirmans PsJN]
 gi|187717057|gb|ACD18281.1| ATP synthase F1, beta subunit [Burkholderia phytofirmans PsJN]
          Length = 464

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D+   I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382


>gi|15804332|ref|NP_290371.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 EDL933]
 gi|15833928|ref|NP_312701.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           Sakai]
 gi|16131600|ref|NP_418188.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. MG1655]
 gi|24115035|ref|NP_709545.1| F0F1 ATP synthase subunit beta [Shigella flexneri 2a str. 301]
 gi|26250476|ref|NP_756516.1| F0F1 ATP synthase subunit beta [Escherichia coli CFT073]
 gi|30064963|ref|NP_839134.1| F0F1 ATP synthase subunit beta [Shigella flexneri 2a str. 2457T]
 gi|74314242|ref|YP_312661.1| F0F1 ATP synthase subunit beta [Shigella sonnei Ss046]
 gi|82546107|ref|YP_410054.1| F0F1 ATP synthase subunit beta [Shigella boydii Sb227]
 gi|89110275|ref|AP_004055.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. W3110]
 gi|91213257|ref|YP_543243.1| F0F1 ATP synthase subunit beta [Escherichia coli UTI89]
 gi|110644073|ref|YP_671803.1| F0F1 ATP synthase subunit beta [Escherichia coli 536]
 gi|110807556|ref|YP_691076.1| F0F1 ATP synthase subunit beta [Shigella flexneri 5 str. 8401]
 gi|117626005|ref|YP_859328.1| F0F1 ATP synthase subunit beta [Escherichia coli APEC O1]
 gi|157156404|ref|YP_001465223.1| F0F1 ATP synthase subunit beta [Escherichia coli E24377A]
 gi|168748538|ref|ZP_02773560.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753634|ref|ZP_02778641.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759932|ref|ZP_02784939.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766232|ref|ZP_02791239.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772219|ref|ZP_02797226.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779967|ref|ZP_02804974.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786575|ref|ZP_02811582.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869]
 gi|168798780|ref|ZP_02823787.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508]
 gi|170022231|ref|YP_001727185.1| F0F1 ATP synthase subunit beta [Escherichia coli ATCC 8739]
 gi|170083233|ref|YP_001732553.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170681189|ref|YP_001746062.1| F0F1 ATP synthase subunit beta [Escherichia coli SMS-3-5]
 gi|170766683|ref|ZP_02901136.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627]
 gi|187732921|ref|YP_001882431.1| F0F1 ATP synthase subunit beta [Shigella boydii CDC 3083-94]
 gi|188493678|ref|ZP_03000948.1| ATP synthase F1, beta subunit [Escherichia coli 53638]
 gi|191165806|ref|ZP_03027644.1| ATP synthase F1, beta subunit [Escherichia coli B7A]
 gi|191170404|ref|ZP_03031957.1| ATP synthase F1, beta subunit [Escherichia coli F11]
 gi|193063774|ref|ZP_03044861.1| ATP synthase F1, beta subunit [Escherichia coli E22]
 gi|193069207|ref|ZP_03050164.1| ATP synthase F1, beta subunit [Escherichia coli E110019]
 gi|194428061|ref|ZP_03060605.1| ATP synthase F1, beta subunit [Escherichia coli B171]
 gi|194431044|ref|ZP_03063337.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012]
 gi|194435783|ref|ZP_03067886.1| ATP synthase F1, beta subunit [Escherichia coli 101-1]
 gi|195936359|ref|ZP_03081741.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807011|ref|ZP_03249348.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812092|ref|ZP_03253421.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818898|ref|ZP_03259218.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400614|ref|YP_002273260.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921213|ref|YP_002295297.1| F0F1 ATP synthase subunit beta [Escherichia coli SE11]
 gi|215489070|ref|YP_002331501.1| F0F1 ATP synthase subunit beta [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217324652|ref|ZP_03440736.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218551266|ref|YP_002385058.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ATCC 35469]
 gi|218556303|ref|YP_002389217.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI1]
 gi|218560807|ref|YP_002393720.1| F0F1 ATP synthase subunit beta [Escherichia coli S88]
 gi|218692020|ref|YP_002400232.1| F0F1 ATP synthase subunit beta [Escherichia coli ED1a]
 gi|218697458|ref|YP_002405125.1| F0F1 ATP synthase subunit beta [Escherichia coli 55989]
 gi|218702582|ref|YP_002410211.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI39]
 gi|218707378|ref|YP_002414897.1| F0F1 ATP synthase subunit beta [Escherichia coli UMN026]
 gi|227883954|ref|ZP_04001759.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|237703533|ref|ZP_04534014.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           3_2_53FAA]
 gi|238902823|ref|YP_002928619.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli BW2952]
 gi|253775633|ref|YP_003038464.1| F0F1 ATP synthase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038951|ref|ZP_04873003.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           1_1_43]
 gi|254163684|ref|YP_003046792.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606]
 gi|254795738|ref|YP_003080575.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021246|ref|ZP_05435111.1| F0F1 ATP synthase subunit beta [Shigella sp. D9]
 gi|256025537|ref|ZP_05439402.1| F0F1 ATP synthase subunit beta [Escherichia sp. 4_1_40B]
 gi|260846483|ref|YP_003224261.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O103:H2 str. 12009]
 gi|260857853|ref|YP_003231744.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O26:H11 str. 11368]
 gi|260870466|ref|YP_003236868.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O111:H- str. 11128]
 gi|261225889|ref|ZP_05940170.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261258934|ref|ZP_05951467.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291285156|ref|YP_003501974.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615]
 gi|293407369|ref|ZP_06651291.1| ATP synthase subunit beta [Escherichia coli FVEC1412]
 gi|293413182|ref|ZP_06655848.1| ATP synthase F1 [Escherichia coli B354]
 gi|293417205|ref|ZP_06659832.1| ATP synthase F1 [Escherichia coli B185]
 gi|293464058|ref|ZP_06664472.1| ATP synthase F1 [Escherichia coli B088]
 gi|298383111|ref|ZP_06992706.1| ATP synthase subunit beta [Escherichia coli FVEC1302]
 gi|300815013|ref|ZP_07095238.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1]
 gi|300824558|ref|ZP_07104668.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7]
 gi|300896061|ref|ZP_07114620.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1]
 gi|300902986|ref|ZP_07120929.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1]
 gi|300925562|ref|ZP_07141435.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1]
 gi|300940918|ref|ZP_07155444.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1]
 gi|300950648|ref|ZP_07164543.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1]
 gi|300958740|ref|ZP_07170857.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1]
 gi|300983828|ref|ZP_07176770.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1]
 gi|300984354|ref|ZP_07176960.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1]
 gi|301020868|ref|ZP_07184927.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1]
 gi|301047555|ref|ZP_07194627.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1]
 gi|301305619|ref|ZP_07211709.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1]
 gi|301324967|ref|ZP_07218522.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1]
 gi|301644408|ref|ZP_07244407.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1]
 gi|306815916|ref|ZP_07450054.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101]
 gi|307140432|ref|ZP_07499788.1| F0F1 ATP synthase subunit beta [Escherichia coli H736]
 gi|307313196|ref|ZP_07592821.1| ATP synthase F1, beta subunit [Escherichia coli W]
 gi|309795711|ref|ZP_07690126.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7]
 gi|331644459|ref|ZP_08345588.1| ATP synthase F1, beta subunit [Escherichia coli H736]
 gi|331649558|ref|ZP_08350644.1| ATP synthase F1, beta subunit [Escherichia coli M605]
 gi|331655394|ref|ZP_08356393.1| ATP synthase F1, beta subunit [Escherichia coli M718]
 gi|331660076|ref|ZP_08361014.1| ATP synthase F1, beta subunit [Escherichia coli TA206]
 gi|331665386|ref|ZP_08366287.1| ATP synthase F1, beta subunit [Escherichia coli TA143]
 gi|331670582|ref|ZP_08371421.1| ATP synthase F1, beta subunit [Escherichia coli TA271]
 gi|331675219|ref|ZP_08375972.1| ATP synthase F1, beta subunit [Escherichia coli TA280]
 gi|331679836|ref|ZP_08380506.1| ATP synthase F1, beta subunit [Escherichia coli H591]
 gi|331685459|ref|ZP_08386045.1| ATP synthase F1, beta subunit [Escherichia coli H299]
 gi|332282473|ref|ZP_08394886.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp.
           D9]
 gi|81175145|sp|P0ABB6|ATPB_ECO57 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81175146|sp|P0ABB5|ATPB_ECOL6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81175147|sp|P0ABB4|ATPB_ECOLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81175148|sp|P0ABB7|ATPB_SHIFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573529|sp|Q0TAX7|ATPB_ECOL5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573530|sp|Q1R4K2|ATPB_ECOUT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573744|sp|Q31UN2|ATPB_SHIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573746|sp|Q3YVN6|ATPB_SHISS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123146532|sp|Q0SYU4|ATPB_SHIF8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201701|sp|A1AHR4|ATPB_ECOK1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990367|sp|A7ZTU4|ATPB_ECO24 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081332|sp|B1IX06|ATPB_ECOLC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740192|sp|B7MGF2|ATPB_ECO45 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740193|sp|B5YXD6|ATPB_ECO5E RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740194|sp|B7NR34|ATPB_ECO7I RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740195|sp|B7M588|ATPB_ECO8A RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740196|sp|B1X9W0|ATPB_ECODH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740197|sp|B7NF48|ATPB_ECOLU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740198|sp|B6I3W9|ATPB_ECOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740199|sp|B1LL59|ATPB_ECOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740201|sp|B7LK77|ATPB_ESCF3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740676|sp|B2TUP3|ATPB_SHIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808149|sp|B7UMJ7|ATPB_ECO27 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808150|sp|B7L882|ATPB_ECO55 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808151|sp|B7N2H1|ATPB_ECO81 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585443|sp|C4ZZ10|ATPB_ECOBW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12518589|gb|AAG58935.1|AE005605_3 membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
           coli O157:H7 str. EDL933]
 gi|26110906|gb|AAN83090.1|AE016769_205 ATP synthase beta chain [Escherichia coli CFT073]
 gi|41038|emb|CAA23527.1| unnamed protein product [Escherichia coli]
 gi|42277|emb|CAA23594.1| unnamed protein product [Escherichia coli]
 gi|146325|gb|AAA83875.1| H+ ATPase F1 beta subunit [Escherichia coli]
 gi|148139|gb|AAA24737.1| ATP synthase beta subunit [Escherichia coli]
 gi|290581|gb|AAA62084.1| ATP synthase F1 beta subunit [Escherichia coli]
 gi|899257|emb|CAA25782.1| unnamed protein product [Escherichia coli]
 gi|1790170|gb|AAC76755.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. MG1655]
 gi|13364149|dbj|BAB38097.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli
           O157:H7 str. Sakai]
 gi|24054294|gb|AAN45252.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           flexneri 2a str. 301]
 gi|30043224|gb|AAP18945.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           flexneri 2a str. 2457T]
 gi|73857719|gb|AAZ90426.1| membrane-bound ATP synthase, F1 sector, beta subunit [Shigella
           sonnei Ss046]
 gi|81247518|gb|ABB68226.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           boydii Sb227]
 gi|85676306|dbj|BAE77556.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K12 substr. W3110]
 gi|91074831|gb|ABE09712.1| membrane-bound ATP synthase F1 sector beta-subunit [Escherichia
           coli UTI89]
 gi|110345665|gb|ABG71902.1| ATP synthase beta chain [Escherichia coli 536]
 gi|110617104|gb|ABF05771.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           flexneri 5 str. 8401]
 gi|115515129|gb|ABJ03204.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
           coli APEC O1]
 gi|157078434|gb|ABV18142.1| ATP synthase F1, beta subunit [Escherichia coli E24377A]
 gi|169757159|gb|ACA79858.1| ATP synthase F1, beta subunit [Escherichia coli ATCC 8739]
 gi|169891068|gb|ACB04775.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170124121|gb|EDS93052.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627]
 gi|170518907|gb|ACB17085.1| ATP synthase F1, beta subunit [Escherichia coli SMS-3-5]
 gi|187429913|gb|ACD09187.1| ATP synthase F1, beta subunit [Shigella boydii CDC 3083-94]
 gi|187771754|gb|EDU35598.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016914|gb|EDU55036.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488877|gb|EDU63980.1| ATP synthase F1, beta subunit [Escherichia coli 53638]
 gi|189002239|gb|EDU71225.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|189359262|gb|EDU77681.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364495|gb|EDU82914.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369653|gb|EDU88069.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373310|gb|EDU91726.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869]
 gi|189378771|gb|EDU97187.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508]
 gi|190904130|gb|EDV63841.1| ATP synthase F1, beta subunit [Escherichia coli B7A]
 gi|190909212|gb|EDV68798.1| ATP synthase F1, beta subunit [Escherichia coli F11]
 gi|192930489|gb|EDV83096.1| ATP synthase F1, beta subunit [Escherichia coli E22]
 gi|192957531|gb|EDV87977.1| ATP synthase F1, beta subunit [Escherichia coli E110019]
 gi|194413819|gb|EDX30097.1| ATP synthase F1, beta subunit [Escherichia coli B171]
 gi|194420499|gb|EDX36575.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012]
 gi|194425326|gb|EDX41310.1| ATP synthase F1, beta subunit [Escherichia coli 101-1]
 gi|208726812|gb|EDZ76413.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733369|gb|EDZ82056.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739021|gb|EDZ86703.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209162014|gb|ACI39447.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209753888|gb|ACI75251.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753890|gb|ACI75252.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753892|gb|ACI75253.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753894|gb|ACI75254.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753896|gb|ACI75255.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209914472|dbj|BAG79546.1| ATP synthase beta subunit [Escherichia coli SE11]
 gi|215267142|emb|CAS11590.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli O127:H6 str. E2348/69]
 gi|217320873|gb|EEC29297.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354190|emb|CAV00818.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli 55989]
 gi|218358808|emb|CAQ91465.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           fergusonii ATCC 35469]
 gi|218363072|emb|CAR00710.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli IAI1]
 gi|218367576|emb|CAR05360.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli S88]
 gi|218372568|emb|CAR20442.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli IAI39]
 gi|218429584|emb|CAR10542.2| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli ED1a]
 gi|218434475|emb|CAR15402.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli UMN026]
 gi|222035445|emb|CAP78190.1| ATP synthase subunit beta [Escherichia coli LF82]
 gi|226838916|gb|EEH70943.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           1_1_43]
 gi|226902797|gb|EEH89056.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           3_2_53FAA]
 gi|227839232|gb|EEJ49698.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|238861068|gb|ACR63066.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli BW2952]
 gi|242379270|emb|CAQ34077.1| ATP synthase, F1 complex, beta subunit, subunit of beta subunit
           complex, ATP synthase, F1 complex and ATP synthase
           [Escherichia coli BL21(DE3)]
 gi|253326677|gb|ACT31279.1| ATP synthase F1, beta subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975585|gb|ACT41256.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606]
 gi|253979741|gb|ACT45411.1| F0F1 ATP synthase subunit beta [Escherichia coli BL21(DE3)]
 gi|254595138|gb|ACT74499.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli O157:H7 str. TW14359]
 gi|257756502|dbj|BAI28004.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O26:H11 str. 11368]
 gi|257761630|dbj|BAI33127.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O103:H2 str. 12009]
 gi|257766822|dbj|BAI38317.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O111:H- str. 11128]
 gi|260451411|gb|ACX41833.1| ATP synthase F1, beta subunit [Escherichia coli DH1]
 gi|281180790|dbj|BAI57120.1| ATP synthase beta subunit [Escherichia coli SE15]
 gi|281603130|gb|ADA76114.1| ATP synthase subunit beta [Shigella flexneri 2002017]
 gi|284923846|emb|CBG36945.1| ATP synthase beta subunit [Escherichia coli 042]
 gi|290765029|gb|ADD58990.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615]
 gi|291321690|gb|EFE61126.1| ATP synthase F1 [Escherichia coli B088]
 gi|291425660|gb|EFE98696.1| ATP synthase subunit beta [Escherichia coli FVEC1412]
 gi|291431236|gb|EFF04229.1| ATP synthase F1 [Escherichia coli B185]
 gi|291468315|gb|EFF10810.1| ATP synthase F1 [Escherichia coli B354]
 gi|294493929|gb|ADE92685.1| ATP synthase F1, beta subunit [Escherichia coli IHE3034]
 gi|298276947|gb|EFI18465.1| ATP synthase subunit beta [Escherichia coli FVEC1302]
 gi|300300541|gb|EFJ56926.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1]
 gi|300306857|gb|EFJ61377.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1]
 gi|300314621|gb|EFJ64405.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1]
 gi|300360047|gb|EFJ75917.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1]
 gi|300398393|gb|EFJ81931.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1]
 gi|300404981|gb|EFJ88519.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1]
 gi|300408390|gb|EFJ91928.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1]
 gi|300418336|gb|EFK01647.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1]
 gi|300450049|gb|EFK13669.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1]
 gi|300454348|gb|EFK17841.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1]
 gi|300522959|gb|EFK44028.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7]
 gi|300531905|gb|EFK52967.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1]
 gi|300839127|gb|EFK66887.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1]
 gi|300848138|gb|EFK75898.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1]
 gi|301077247|gb|EFK92053.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1]
 gi|305850312|gb|EFM50769.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101]
 gi|306906879|gb|EFN37388.1| ATP synthase F1, beta subunit [Escherichia coli W]
 gi|307555871|gb|ADN48646.1| ATP synthase beta chain [Escherichia coli ABU 83972]
 gi|307628806|gb|ADN73110.1| F0F1 ATP synthase subunit beta [Escherichia coli UM146]
 gi|308120590|gb|EFO57852.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7]
 gi|309704180|emb|CBJ03527.1| ATP synthase beta subunit [Escherichia coli ETEC H10407]
 gi|312948298|gb|ADR29125.1| F0F1 ATP synthase subunit beta [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313647652|gb|EFS12100.1| ATP synthase F1, beta subunit [Shigella flexneri 2a str. 2457T]
 gi|315063042|gb|ADT77369.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli W]
 gi|315138317|dbj|BAJ45476.1| ATP synthase subunit beta [Escherichia coli DH1]
 gi|315254575|gb|EFU34543.1| ATP synthase F1, beta subunit [Escherichia coli MS 85-1]
 gi|315285514|gb|EFU44956.1| ATP synthase F1, beta subunit [Escherichia coli MS 110-3]
 gi|315292848|gb|EFU52200.1| ATP synthase F1, beta subunit [Escherichia coli MS 153-1]
 gi|315296876|gb|EFU56165.1| ATP synthase F1, beta subunit [Escherichia coli MS 16-3]
 gi|320174622|gb|EFW49758.1| ATP synthase beta chain [Shigella dysenteriae CDC 74-1112]
 gi|320186285|gb|EFW61021.1| ATP synthase beta chain [Shigella flexneri CDC 796-83]
 gi|320191164|gb|EFW65814.1| ATP synthase beta chain [Escherichia coli O157:H7 str. EC1212]
 gi|320193723|gb|EFW68356.1| ATP synthase beta chain [Escherichia coli WV_060327]
 gi|320201236|gb|EFW75817.1| ATP synthase beta chain [Escherichia coli EC4100B]
 gi|320639460|gb|EFX09075.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           G5101]
 gi|320644900|gb|EFX13936.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str.
           493-89]
 gi|320650166|gb|EFX18662.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str. H
           2687]
 gi|320655515|gb|EFX23450.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661138|gb|EFX28574.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666267|gb|EFX33273.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323155413|gb|EFZ41596.1| ATP synthase F1, beta subunit [Escherichia coli EPECa14]
 gi|323380896|gb|ADX53164.1| ATP synthase F1, beta subunit [Escherichia coli KO11]
 gi|323934917|gb|EGB31295.1| ATP synthase F1 [Escherichia coli E1520]
 gi|323939205|gb|EGB35418.1| ATP synthase F1 [Escherichia coli E482]
 gi|323944208|gb|EGB40288.1| ATP synthase F1 [Escherichia coli H120]
 gi|323949975|gb|EGB45859.1| ATP synthase F1 [Escherichia coli H252]
 gi|323954973|gb|EGB50751.1| ATP synthase F1 [Escherichia coli H263]
 gi|323959798|gb|EGB55448.1| ATP synthase F1 [Escherichia coli H489]
 gi|323965800|gb|EGB61251.1| ATP synthase F1 [Escherichia coli M863]
 gi|323971211|gb|EGB66457.1| ATP synthase F1 [Escherichia coli TA007]
 gi|323975200|gb|EGB70304.1| ATP synthase F1 [Escherichia coli TW10509]
 gi|324008032|gb|EGB77251.1| ATP synthase F1, beta subunit [Escherichia coli MS 57-2]
 gi|324012762|gb|EGB81981.1| ATP synthase F1, beta subunit [Escherichia coli MS 60-1]
 gi|324018470|gb|EGB87689.1| ATP synthase F1, beta subunit [Escherichia coli MS 117-3]
 gi|324111631|gb|EGC05612.1| ATP synthase F1 [Escherichia fergusonii B253]
 gi|324115912|gb|EGC09838.1| ATP synthase F1 [Escherichia coli E1167]
 gi|325499538|gb|EGC97397.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ECD227]
 gi|326340520|gb|EGD64319.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1044]
 gi|326341586|gb|EGD65375.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1125]
 gi|327250884|gb|EGE62586.1| ATP synthase F1, beta subunit [Escherichia coli STEC_7v]
 gi|330908045|gb|EGH36564.1| ATP synthase beta chain [Escherichia coli AA86]
 gi|331036753|gb|EGI08979.1| ATP synthase F1, beta subunit [Escherichia coli H736]
 gi|331042056|gb|EGI14200.1| ATP synthase F1, beta subunit [Escherichia coli M605]
 gi|331047409|gb|EGI19487.1| ATP synthase F1, beta subunit [Escherichia coli M718]
 gi|331053291|gb|EGI25324.1| ATP synthase F1, beta subunit [Escherichia coli TA206]
 gi|331057896|gb|EGI29882.1| ATP synthase F1, beta subunit [Escherichia coli TA143]
 gi|331062644|gb|EGI34564.1| ATP synthase F1, beta subunit [Escherichia coli TA271]
 gi|331067664|gb|EGI39066.1| ATP synthase F1, beta subunit [Escherichia coli TA280]
 gi|331073008|gb|EGI44333.1| ATP synthase F1, beta subunit [Escherichia coli H591]
 gi|331077830|gb|EGI49042.1| ATP synthase F1, beta subunit [Escherichia coli H299]
 gi|332084602|gb|EGI89796.1| ATP synthase F1, beta subunit [Shigella boydii 5216-82]
 gi|332104825|gb|EGJ08171.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp.
           D9]
 gi|332345722|gb|AEE59056.1| ATP synthase F1, beta subunit AtpD [Escherichia coli UMNK88]
 gi|332750741|gb|EGJ81149.1| ATP synthase F1, beta subunit [Shigella flexneri 4343-70]
 gi|332750905|gb|EGJ81311.1| ATP synthase F1, beta subunit [Shigella flexneri K-671]
 gi|332998044|gb|EGK17649.1| ATP synthase F1, beta subunit [Shigella flexneri K-272]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|325846719|ref|ZP_08169634.1| ATP synthase ab C terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481477|gb|EGC84518.1| ATP synthase ab C terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 457

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 190/383 (49%), Gaps = 27/383 (7%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115
           +GQV++I+ + V +   G  ++ SL D+V  F      I  +    GR  N + +PID G
Sbjct: 40  IGQVVKIDDETVTVEVFGNTQDFSLNDIVVEFEEKPLEIPLNESILGRTFNGIARPIDDG 99

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            +       S+E     P A  R+      +TGI  IDI T L  GQ++ +F+GSG+  +
Sbjct: 100 GEIYSDKFYSVEGNPLNPVA--REYPRNFIQTGISSIDILTTLIRGQKLPIFSGSGMPHN 157

Query: 176 TLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227
            + +   R          CF   + + +G +  E   F + +    +K  VV+     + 
Sbjct: 158 EIAAQIVRQAKLKTNEDFCF---VFAAMGIKKDEAMFFEDAFTKAGVKDKVVMYENLADD 214

Query: 228 PILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           PI+ ++  P  A+T AEY +  K  +VL+I+  IT +A ++RE+++   E+P  +GYP  
Sbjct: 215 PIMERLITPKCALTAAEYLAFEKNKHVLVIITDITSYAEALREVSSIRQEVPSRKGYPGY 274

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           ++S+L  L ER G  E   G++T +  + +  D+   PI D    I +G IV++R L ++
Sbjct: 275 LYSDLASLYERAGMIEGVNGSVTLIPILTMPNDDITHPIPDLTGYITEGQIVIDRMLDQK 334

Query: 346 GRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           G YPP++ L S+SRL      +     D + L++ L     + +E R+I  I G     D
Sbjct: 335 GIYPPINVLPSLSRLMKDGIGEGYTRKDHEDLMNQLYESYSKVQEIRNISQIVGEDDLSD 394

Query: 401 LILDKAVHQVPIIYD--FLKQSP 421
             +DKA  +    ++  FL Q P
Sbjct: 395 --VDKAYLKFGKEFESRFLSQDP 415


>gi|312971976|ref|ZP_07786150.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70]
 gi|310334353|gb|EFQ00558.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70]
          Length = 441

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354


>gi|293391130|ref|ZP_06635464.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951664|gb|EFE01783.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 457

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEQGPIGEEE-RWSIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRIP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKDIIAILG 376


>gi|27468618|ref|NP_765255.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis ATCC
           12228]
 gi|57867649|ref|YP_189274.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis RP62A]
 gi|251812184|ref|ZP_04826657.1| H(+)-transporting two-sector ATPase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876489|ref|ZP_06285355.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis SK135]
 gi|293366067|ref|ZP_06612755.1| ATP synthase F1 sector beta subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38604812|sp|Q8CNJ7|ATPB_STAES RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81170379|sp|Q5HMB9|ATPB_STAEQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27316165|gb|AAO05299.1|AE016749_245 ATP synthase beta chain [Staphylococcus epidermidis ATCC 12228]
 gi|57638307|gb|AAW55095.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis RP62A]
 gi|251804281|gb|EES56938.1| H(+)-transporting two-sector ATPase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294741|gb|EFA87269.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis SK135]
 gi|291319790|gb|EFE60148.1| ATP synthase F1 sector beta subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726160|gb|EGG62632.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU144]
 gi|329734118|gb|EGG70436.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU045]
 gi|329735661|gb|EGG71944.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU028]
          Length = 470

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID D+ +        I  + P         +  +TGI+V+D+  P  
Sbjct: 87  VTLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           KK+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  S   KG++T++ +V V  D++ DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR  + +    E   V+  +   + ++ E +DI  I
Sbjct: 324 STTNLERKLTEMGIYPAVDPLASTSRALEPSVVGQEHYDVAREVQSTLQKYRELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|301019812|ref|ZP_07183955.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1]
 gi|312967858|ref|ZP_07782070.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75]
 gi|299882071|gb|EFI90282.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1]
 gi|312287419|gb|EFR15327.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75]
 gi|320180086|gb|EFW55028.1| ATP synthase beta chain [Shigella boydii ATCC 9905]
 gi|323161016|gb|EFZ46935.1| ATP synthase F1, beta subunit [Escherichia coli E128010]
 gi|323167006|gb|EFZ52745.1| ATP synthase F1, beta subunit [Shigella sonnei 53G]
 gi|323177752|gb|EFZ63336.1| ATP synthase F1, beta subunit [Escherichia coli 1180]
 gi|323189535|gb|EFZ74815.1| ATP synthase F1, beta subunit [Escherichia coli RN587/1]
 gi|332084755|gb|EGI89941.1| ATP synthase F1, beta subunit [Shigella dysenteriae 155-74]
 gi|332089325|gb|EGI94429.1| ATP synthase F1, beta subunit [Shigella boydii 3594-74]
 gi|332751757|gb|EGJ82155.1| ATP synthase F1, beta subunit [Shigella flexneri 2747-71]
 gi|332995979|gb|EGK15606.1| ATP synthase F1, beta subunit [Shigella flexneri VA-6]
 gi|333013459|gb|EGK32830.1| ATP synthase F1, beta subunit [Shigella flexneri K-304]
 gi|333013706|gb|EGK33071.1| ATP synthase F1, beta subunit [Shigella flexneri K-227]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354


>gi|308071147|ref|YP_003872752.1| ATP synthase subunit beta [Paenibacillus polymyxa E681]
 gi|305860426|gb|ADM72214.1| ATP synthase beta chain [Paenibacillus polymyxa E681]
          Length = 466

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 11/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG PID    +   + +   + +  P+ +    + +  +TGI+VID+  P 
Sbjct: 88  ATLGRVFNVLGTPIDNGADMS--ETARNPIHRQAPSFDELTTQAEMLETGIKVIDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+  +     +   +   IS+   VGER RE  +   +      +
Sbjct: 146 AKGGKVGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMRDSGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 NKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDVLLFIDNIFRFTQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R ++E G YP VDPLAS SR LA      +   +   +  ++ R+ E +DI  I
Sbjct: 324 ATTNLERKISEMGIYPAVDPLASSSRILAPDVVGEEHYNVAQGVKQILARYNELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|110598291|ref|ZP_01386566.1| ATP synthase F1, beta subunit [Chlorobium ferrooxidans DSM 13031]
 gi|110340099|gb|EAT58599.1| ATP synthase F1, beta subunit [Chlorobium ferrooxidans DSM 13031]
          Length = 462

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 158/297 (53%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N +G+PIDG   +     +  I    P         + F+TGI+VID+  P   G +
Sbjct: 88  RMMNVVGEPIDGRGPVHTAK-TYSIHRSAPKFDEISTKAEMFETGIKVIDLLEPYSRGGK 146

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219
            G+F G+G+GK+ L+     +    +   S+   VGER RE  +   + +    + K+ +
Sbjct: 147 TGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWHEMMESGVIDKTAL 206

Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R+   LT ++IAEYF   +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 207 VFGQMNEPPGARQRVALTGLSIAEYFRDEEGRDVLLFIDNIFRFTQAGSEVSALLGRMPS 266

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+ +L +RI     +KG++T+V ++ V  D+  DP   +  + LD   VL
Sbjct: 267 AVGYQPTLATEMGQLQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDATTVL 324

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +R +AE G YP VDPL S SR+ D     D+      ++  L+ R+++ +DI  I G
Sbjct: 325 SRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQLLQRYKDLQDIIAILG 381


>gi|85060392|ref|YP_456094.1| F0F1 ATP synthase subunit beta [Sodalis glossinidius str.
           'morsitans']
 gi|118573748|sp|Q2NQ86|ATPB_SODGM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|84780912|dbj|BAE75689.1| ATP synthase beta subunit [Sodalis glossinidius str. 'morsitans']
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        +   +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPVDM-----KGDIGEEERWSIHRPAPSYEELASSQDLLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|257094250|ref|YP_003167891.1| F0F1 ATP synthase subunit beta [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046774|gb|ACV35962.1| ATP synthase F1, beta subunit [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 449

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 157/305 (51%), Gaps = 9/305 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  +I  +    GR+++  G+P+DG  +L   +    I++   P      + +   TGI+
Sbjct: 68  GPLQIPVTPDCLGRLLDIFGQPLDGGPALEATEFR-PIVAAPAPLAEELGMGEILPTGIK 126

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIE 207
           VID+  P   G + G+F G+G+GK+ L+  F  +       +S+   VGER RE  E   
Sbjct: 127 VIDLLCPFVRGGKTGLFGGAGVGKTVLIMEFMNAIVRLHQGVSVFAGVGERIREGHELWH 186

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
           D      + +S++V    DESP +R    L+A+T AEY        VL ++D+  RF  +
Sbjct: 187 DMQDAGVMPRSLMVFGQMDESPGVRFRIGLSALTYAEYLRDHVAKEVLFLMDNAFRFVQA 246

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P   GY  ++ SE+  L ERI  S    GNITAV +V V  D+  DP  
Sbjct: 247 GSELSGLLGRMPATVGYQPTLLSEVAELQERI--SSTRSGNITAVEAVYVPADDMTDPAV 304

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            ++ + LD  ++L+R+ A +G YP VDPLAS S + D+    D   ++  ++   + R+ 
Sbjct: 305 GAILAHLDTTVILSRNQAAKGIYPAVDPLASGSPMMDRVTLGDRHYQVAQAVREHLARYR 364

Query: 385 ETRDI 389
           E  DI
Sbjct: 365 ELEDI 369


>gi|206577341|ref|YP_002241287.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae 342]
 gi|288937926|ref|YP_003441985.1| ATP synthase F1 subunit beta [Klebsiella variicola At-22]
 gi|290511666|ref|ZP_06551034.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55]
 gi|226740210|sp|B5XZM4|ATPB_KLEP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|206566399|gb|ACI08175.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae 342]
 gi|288892635|gb|ADC60953.1| ATP synthase F1, beta subunit [Klebsiella variicola At-22]
 gi|289775456|gb|EFD83456.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGQPVDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|313665019|ref|YP_004046890.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50]
 gi|312949426|gb|ADR24022.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50]
          Length = 476

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 22/305 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR+ N LG PID      K DL ++   I    P         +  +TGI+VID+  P 
Sbjct: 98  LGRMFNVLGDPIDE-----KPDLDVKRLPIHRDAPIYEELVTTTEILETGIKVIDLMIPF 152

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLG 211
             G ++G+F G+G+GK+ L+       +   + V + + VGER RE      EFIE  + 
Sbjct: 153 TKGGKVGLFGGAGVGKTILIQELINNIAKAHNGVSVFAGVGERTREGNDLYHEFIEAGV- 211

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             L K+ +V    +E P  R    LT +TIAEYF  K + +VLL +D+I RF  +  E++
Sbjct: 212 --LNKTCLVFGQMNEPPGARMRVALTGLTIAEYFRDKKNMDVLLFIDNIFRFTQAGSEVS 269

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFT 327

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389
            LD  IVL+RS+A  G YP VDPLAS SR+ D      E   ++    + + +++E + I
Sbjct: 328 HLDARIVLDRSIASLGIYPAVDPLASSSRVLDPEIVGQEHYDIALKVQITLQKYQELQSI 387

Query: 390 RLIGG 394
             I G
Sbjct: 388 IAILG 392


>gi|170040305|ref|XP_001847944.1| ATP synthase beta subunit [Culex quinquefasciatus]
 gi|167863871|gb|EDS27254.1| ATP synthase beta subunit [Culex quinquefasciatus]
          Length = 511

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 167/322 (51%), Gaps = 24/322 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    + + +LS  I ++ P  +     ++   TGI+V+
Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFVEMSVEQEILVTGIKVV 166

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225

Query: 205 FIED---YLGDNLKKSV-------VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253
            IE     L D   K V       +V    +E P  R    LT +T+AEYF   +G +VL
Sbjct: 226 MIEGGVISLKDKTSKVVSIEALVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVL 285

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++
Sbjct: 286 LFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAI 343

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKL 372
            V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +
Sbjct: 344 YVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNI 403

Query: 373 VSSLTHLIHRFEETRDIRLIGG 394
              +  ++  ++  +DI  I G
Sbjct: 404 ARGVQKILQDYKSLQDIIAILG 425


>gi|119471627|ref|ZP_01614012.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7]
 gi|119445406|gb|EAW26693.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7]
          Length = 461

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 166/332 (50%), Gaps = 9/332 (2%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G  V + G   ++       GR++N LG+PID    +G+ D  M 
Sbjct: 52  VVRTIALGTTDGLRRGAAVSNTGEAIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMS 110

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   
Sbjct: 111 IHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE
Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIAST--K 288

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                E       +  ++ R++E +DI  I G
Sbjct: 349 LVIGQEHYDTARGVQTVLQRYKELKDIIAILG 380


>gi|82779076|ref|YP_405425.1| F0F1 ATP synthase subunit beta [Shigella dysenteriae Sd197]
 gi|118573745|sp|Q329S1|ATPB_SHIDS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81243224|gb|ABB63934.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           dysenteriae Sd197]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|157163214|ref|YP_001460532.1| F0F1 ATP synthase subunit beta [Escherichia coli HS]
 gi|166990368|sp|A8A6J5|ATPB_ECOHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157068894|gb|ABV08149.1| ATP synthase F1, beta subunit [Escherichia coli HS]
          Length = 460

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|323173357|gb|EFZ58986.1| ATP synthase F1, beta subunit [Escherichia coli LT-68]
 gi|332997375|gb|EGK16991.1| ATP synthase F1, beta subunit [Shigella flexneri K-218]
          Length = 466

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|238750324|ref|ZP_04611826.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380]
 gi|238765107|ref|ZP_04626041.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638]
 gi|238696659|gb|EEP89442.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638]
 gi|238711557|gb|EEQ03773.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G
Sbjct: 60  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|296127615|ref|YP_003634867.1| ATP synthase F1, beta subunit [Brachyspira murdochii DSM 12563]
 gi|296019431|gb|ADG72668.1| ATP synthase F1, beta subunit [Brachyspira murdochii DSM 12563]
          Length = 470

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 164/322 (50%), Gaps = 12/322 (3%)

Query: 81  ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           IS GD +F      + P      GR+ N LG+ +D  + +   +     +   PP     
Sbjct: 70  ISRGDDIFDTENHIMVPVGTETIGRIFNVLGQTVDKGEPVEAKEYRS--IHAAPPKFETL 127

Query: 140 RVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLV 195
             + + F+TGI+VID+  P   G + G+F G+G+GK+ L+        S+     + + V
Sbjct: 128 EPKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIASEHGGYSVFAGV 187

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253
           GER RE  +   +      + K+ +V    +E P  R    LTA+T+AEYF  S G +VL
Sbjct: 188 GERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALTALTMAEYFRDSAGLDVL 247

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT++ +V
Sbjct: 248 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTRNGSITSIQAV 305

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372
            V  D+  DP   +  + LD   VL+R ++E+G YP VDPLAS SR+ D      E    
Sbjct: 306 YVPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILDPNILGQEHYDT 365

Query: 373 VSSLTHLIHRFEETRDIRLIGG 394
              + H++ R+ + +DI  I G
Sbjct: 366 ARRVQHILQRYRDLQDIIAILG 387


>gi|186477773|ref|YP_001859243.1| F0F1 ATP synthase subunit beta [Burkholderia phymatum STM815]
 gi|184194232|gb|ACC72197.1| ATP synthase F1, beta subunit [Burkholderia phymatum STM815]
          Length = 464

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   ++   I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPIASDNMR-SIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382


>gi|3913122|sp|O50292|ATPB_AQUPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2687826|emb|CAA75780.1| F1F0-ATPase beta subunit [Aquifex pyrophilus]
          Length = 478

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 168/312 (53%), Gaps = 13/312 (4%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149
           G  +I       GR+ N  G+PID    +   +     M + PP +  Q  + +  +TGI
Sbjct: 87  GPIKIPVGKEVLGRIFNVAGQPIDEQGPVEAKEYWP--MFRNPPELVEQSTKVEILETGI 144

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE- 204
           +VID+  P+  G ++G+F G+G+GK+ L+       AR      V++  VGER RE  + 
Sbjct: 145 KVIDLLQPIIKGGKVGLFGGAGVGKTVLMQELIHNIARFHEGYSVVVG-VGERTREGNDL 203

Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
           ++E      L  +V+V    +E P +R     T +T+AEYF   +G +VL+ +D+I RF 
Sbjct: 204 WLEMKESGVLPYTVMVYGQMNEPPGVRFRVAHTGLTMAEYFRDVEGQDVLIFIDNIFRFV 263

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++T  G LP A GY  ++ +++  + ERI  +  +KG+ITA+ +V V  D+  DP
Sbjct: 264 QAGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSITAIQAVYVPADDITDP 321

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              S+ + LD   VL R LAE G YP +DPL S S+ LA +    +  ++   +  ++ R
Sbjct: 322 APWSIFAHLDATTVLTRRLAELGIYPAIDPLESTSKYLAPEYVGEEHYEVAMEVKRILQR 381

Query: 383 FEETRDIRLIGG 394
           ++E ++I  I G
Sbjct: 382 YKELQEIIAILG 393


>gi|121603172|ref|YP_980501.1| F0F1 ATP synthase subunit beta [Polaromonas naphthalenivorans CJ2]
 gi|190358212|sp|A1VIV2|ATPB1_POLNA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|120592141|gb|ABM35580.1| ATP synthase F1 subcomplex beta subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 474

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 171/340 (50%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  + +  G++V++ G     P      GR+++ LG PID    + +  L+  
Sbjct: 58  IVRTIALGTSDGLRRGNIVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQ-TLTAP 116

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 117 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 176

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +         D L+ S V  V    +E P  R    
Sbjct: 177 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLDKLEDSKVAMVYGQMNEPPGNRLRVA 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 236 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 296 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 353

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           S SR L+      D      ++   + R++E RDI  I G
Sbjct: 354 STSRQLSPAVVGEDHYNTARAVQGTLQRYKELRDIIAILG 393


>gi|46909253|gb|AAT06144.1| ATP synthase beta subunit [Metridium senile]
          Length = 427

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 15/314 (4%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +     S  I  + P  ++    ++  +TGI+V+
Sbjct: 55  IRIPVGPALLGRIINVIGEPIDERGPINTDKYS-SIHQEAPEFVDMSVEQEILQTGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + 
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKGHGGFSVFAGVGERTREGNDLYHEM 173

Query: 210 -------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                  L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I  
Sbjct: 174 ITSKVISLTDDTSKVALVYGQMNEPPGARARGCLTGLTVAEYFRDQEGQDVLLFIDNIFL 233

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 234 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 291

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D     +E   V+  +  ++
Sbjct: 292 DPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRILDPNVVGEEHYTVARGVQKVL 351

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 352 QDYKSLQDIIAILG 365


>gi|260913589|ref|ZP_05920066.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC
           43325]
 gi|260632365|gb|EEX50539.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC
           43325]
          Length = 457

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCH 160
            GR++N LG+PID    +G  +     + + PP+   Q    +  +TGI+VID+  P   
Sbjct: 82  LGRIMNVLGEPIDEQGPIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAK 139

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K
Sbjct: 140 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDK 199

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +
Sbjct: 200 VSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 259

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +
Sbjct: 260 PSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTV 317

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 318 VLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 376


>gi|157964051|ref|YP_001504085.1| F0F1 ATP synthase subunit beta [Shewanella pealeana ATCC 700345]
 gi|189081346|sp|A8HAG3|ATPB_SHEPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157849051|gb|ABV89550.1| ATP synthase F1, beta subunit [Shewanella pealeana ATCC 700345]
          Length = 458

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 162/304 (53%), Gaps = 14/304 (4%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           +   GR++N LG+P+D    +G+ D  + I  + P   ++    +  +TGI+VID+  P 
Sbjct: 80  SATLGRIMNVLGEPVDEAGPIGEEDRYV-IHREAPSYEDQSNTTELLETGIKVIDLVCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLG 211
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F   +ED   
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--S 195

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++ 
Sbjct: 196 GVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSA 255

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 313

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R++A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI 
Sbjct: 314 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDII 373

Query: 391 LIGG 394
            I G
Sbjct: 374 AILG 377


>gi|134300981|ref|YP_001114477.1| F0F1 ATP synthase subunit beta [Desulfotomaculum reducens MI-1]
 gi|190358666|sp|A4J999|ATPB_DESRM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134053681|gb|ABO51652.1| ATP synthase F1 subcomplex beta subunit [Desulfotomaculum reducens
           MI-1]
          Length = 472

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 162/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+  DG + + K +    I    P  +++    +  +TGI+VID+  P   G 
Sbjct: 93  GRLLNVLGEEADGLEPI-KAEKYYPIHRPAPALVDQSTKAEMLETGIKVIDLMIPFLKGG 151

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ ++     +       IS+   VGER RE  +   +      L+K++
Sbjct: 152 KIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLEKTI 211

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AE+F   +G + LL +D+I RF  +  E++   G +P
Sbjct: 212 MVFGQMNEPPGARLRVGLTGLTMAEFFRDEEGADTLLFIDNIFRFTQAGSEVSALLGRMP 271

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+ +L ERI  +   KG++T+V ++ V  D+  DP   +  + LD  +V
Sbjct: 272 SAVGYQPTLATEMGQLQERI--TSTRKGSVTSVQAIYVPADDLTDPAPANAFAHLDATVV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R+++E G YP VDPL S SR+ D      E  +    +  ++ R++E +DI  I G
Sbjct: 330 LSRAISELGIYPAVDPLDSTSRILDPQVVGKEHYECARGVQSVLQRYKELQDIIAILG 387


>gi|238753980|ref|ZP_04615339.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473]
 gi|238707732|gb|EEQ00091.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473]
          Length = 435

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P  
Sbjct: 58  ATLGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|225712758|gb|ACO12225.1| ATP synthase subunit beta, mitochondrial precursor [Lepeophtheirus
           salmonis]
          Length = 505

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G PID    +        I ++ PP       ++   TGI+V+D+  P   G
Sbjct: 115 LGRIINVIGDPIDERGPVNSKS-KASIHAEAPPFSEMSVQQEILVTGIKVVDLLAPYAKG 173

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 174 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 232

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 233 KDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEV 292

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 293 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATTF 350

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     A+  ++  ++  ++  ++  +D
Sbjct: 351 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGAEHYQIARNIQKILQDYKSLQD 410

Query: 389 IRLIGG 394
           I  I G
Sbjct: 411 IIAILG 416


>gi|1168571|sp|P42468|ATPB_BURCE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|587502|emb|CAA54204.1| ATPase beta-subunit [Burkholderia cepacia]
          Length = 463

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 9/297 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N+   V
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
            +V      P   ++  LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P 
Sbjct: 207 ALVYGQMNEPPGNRLRVLTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPS 266

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +VL
Sbjct: 267 AVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVL 324

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 SRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 381


>gi|238759558|ref|ZP_04620720.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236]
 gi|238702217|gb|EEP94772.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236]
          Length = 435

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G
Sbjct: 60  LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|256827613|ref|YP_003151572.1| ATP synthase, F1 beta subunit [Cryptobacterium curtum DSM 15641]
 gi|256583756|gb|ACU94890.1| ATP synthase, F1 beta subunit [Cryptobacterium curtum DSM 15641]
          Length = 479

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+P+DG   +      M I    P         + F+TGI+V+D+  P   G 
Sbjct: 100 GRIWNVVGEPVDGK-PMPDIARRMPIHHPAPEYDTLTTTTEIFETGIKVVDLIEPFIRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ ++     +   +     + + VGER RE  + ++E      + K+ 
Sbjct: 159 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSEAGVINKTC 218

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 219 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 278

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 279 AVGYQPTLATEMGDLQERI--TSTNVGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 336

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           NRS+AE G YP VDPL S SR  + A    E   V+  +  ++  +++ +DI  I G
Sbjct: 337 NRSIAELGIYPAVDPLESTSRALEPAIVGQEHYDVAVGVQQILQNYKDLQDIIAILG 393


>gi|254520882|ref|ZP_05132937.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14]
 gi|219718473|gb|EED36998.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14]
          Length = 468

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D S EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRAAPSYEDQSPATELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+RS+A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|194367283|ref|YP_002029893.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia
           R551-3]
 gi|226740679|sp|B4SJR9|ATPB_STRM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194350087|gb|ACF53210.1| ATP synthase F1, beta subunit [Stenotrophomonas maltophilia R551-3]
          Length = 468

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D S EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRDAPSYEDQSPATELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+RS+A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|4519350|dbj|BAA75590.1| ATP synthase beta-subunit [Chlorogonium kasakii]
          Length = 376

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR++N LG+P+D   +LG  K + S+ I  + P  ++       F+TGI+V+DI  P  
Sbjct: 31  LGRILNVLGEPVD---NLGPVKANSSLPIHRQAPAFVDLDTRLSIFETGIKVVDILAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK   +  S+   + R+
Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYATAQSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|311696570|gb|ADP99443.1| ATP synthase subunit beta [marine bacterium HP15]
          Length = 464

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +G+ +    I  K P   ++       +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEAGEIGEEE-RWAIHRKAPGYADQAASADLLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKESNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +  S LD  +
Sbjct: 261 PSAVGYQPTLAEEMGQLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFSHLDATV 318

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +A +G YP +DPL S SR  D      E  ++   +   + R++E +DI  I G
Sbjct: 319 VLSRDIASKGIYPAIDPLDSTSRQLDPLIIGQEHYEVARGVQTNLQRYKELKDIIAILG 377


>gi|154246023|ref|YP_001416981.1| F0F1 ATP synthase subunit beta [Xanthobacter autotrophicus Py2]
 gi|226740692|sp|A7IH31|ATPB_XANP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154160108|gb|ABS67324.1| ATP synthase F1, beta subunit [Xanthobacter autotrophicus Py2]
          Length = 478

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 26/316 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           A   GR++N +G+P+D    LG  + + +  I    P    +    +   TGI+V+D+  
Sbjct: 83  AGTLGRIMNVIGEPVD---ELGPIEAEATRGIHQPAPSYAEQATEAEILVTGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G ++G+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  
Sbjct: 140 PYAKGGKVGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIES 198

Query: 213 NLKKS-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           N+ K               +V    +E P  R    LT +T+AE+F  +G +VL  +D+I
Sbjct: 199 NVNKDPHENGGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNI 258

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+
Sbjct: 259 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADD 316

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
             DP   +  + LD   VL+RS+AE+G YP VDPL S SR+   A   DE       +  
Sbjct: 317 LTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAILGDEHYNTARQVQQ 376

Query: 379 LIHRFEETRDIRLIGG 394
            + R++  +DI  I G
Sbjct: 377 TLQRYKALQDIIAILG 392


>gi|83319730|ref|YP_424079.1| F0F1 ATP synthase subunit beta [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|118573698|sp|Q2ST34|ATPB_MYCCT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|83283616|gb|ABC01548.1| ATP synthase F1, beta subunit [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 476

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 22/305 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR+ N LG PID      K DL ++   I    P         +  +TGI+VID+  P 
Sbjct: 98  LGRMFNVLGDPIDE-----KPDLDVKRLPIHRDAPIYEELVTTTEILETGIKVIDLMIPF 152

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLG 211
             G ++G+F G+G+GK+ L+       +   + V + + VGER RE      EFIE  + 
Sbjct: 153 TKGGKVGLFGGAGVGKTILIQELINNIAKAHNGVSVFAGVGERTREGNDLYHEFIEAGV- 211

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             L K+ +V    +E P  R    LT +TIAEYF  K + +VLL +D+I RF  +  E++
Sbjct: 212 --LNKTCLVFGQMNEPPGARMRVALTGLTIAEYFRDKKNMDVLLFIDNIFRFTQAGSEVS 269

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFT 327

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389
            LD  IVL+RS+A  G YP VDPLAS SR+ D      E   ++    + + +++E + I
Sbjct: 328 HLDARIVLDRSIASLGIYPAVDPLASSSRVLDPEIVGQEHYDIALKVQITLQKYQELQSI 387

Query: 390 RLIGG 394
             I G
Sbjct: 388 IAILG 392


>gi|240851266|ref|YP_002972669.1| ATP synthase beta chain [Bartonella grahamii as4aup]
 gi|240268389|gb|ACS51977.1| ATP synthase beta chain [Bartonella grahamii as4aup]
          Length = 542

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 22/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +     +  I  + PP + +  + +   TGI+V+D+  P  
Sbjct: 147 ATLGRIMNVIGEPVDNVGPI-PATKTRSIHQEAPPYVEQSTISEILVTGIKVVDLLAPYS 205

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  + 
Sbjct: 206 KGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 264

Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            N K         K  +V    +E P  R    L+ +TIAE F  +G +VL  +D+I RF
Sbjct: 265 VNPKENNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRF 324

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  D
Sbjct: 325 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTD 382

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381
           P   +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ 
Sbjct: 383 PAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQ 442

Query: 382 RFEETRDIRLIGG 394
           R+   +DI  I G
Sbjct: 443 RYRALQDIIAILG 455


>gi|149369647|ref|ZP_01889499.1| F0F1 ATP synthase subunit beta [unidentified eubacterium SCB49]
 gi|149357074|gb|EDM45629.1| F0F1 ATP synthase subunit beta [unidentified eubacterium SCB49]
          Length = 501

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 162/330 (49%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G PIDG ++L K G   + I  + P         +   TGI+VID+  P   G
Sbjct: 89  GRLFNVIGDPIDGMEALAKAGKDGLPIHREAPKFEELSTSSEVLFTGIKVIDLIEPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 208

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 209 DDFMHSMEEGGWDLSKVDKMAMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 268

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 269 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 326

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+   A 
Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAAI 386

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  L+ R++E +DI  I G
Sbjct: 387 LGDEHYDCAQRVKMLLQRYKELQDIIAILG 416


>gi|32490757|ref|NP_871011.1| F0F1 ATP synthase subunit beta [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|81844477|sp|Q8D3J3|ATPB_WIGBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|25165963|dbj|BAC24154.1| atpD [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 462

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 14/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR++N LG PID    +    LS E   I +K P        ++  +TGI++ID+  P 
Sbjct: 85  LGRIMNVLGDPIDRKGKI----LSSEYRPIHNKSPSYNEISSSDELLETGIKIIDLICPF 140

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+  +    R+   +     + S VGER RE  +F  + +  N +
Sbjct: 141 AKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGVGERTREGNDFYNEMISSNVI 200

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G++VL  +D+I R+  +  E++   G
Sbjct: 201 DKVSLVYGQMNEPPGNRLRVALTGLTLAEKFRDEGNDVLFFVDNIYRYTLAGTEVSALLG 260

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V ++ V  D+  DP   +    LD 
Sbjct: 261 RIPSAVGYQPTLSEEMGILQERI--TSTKSGSITSVQAIYVPADDLTDPSPATTFVHLDA 318

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP +DPL S SR  D     ++  LV+  +  ++ R+++ +DI  I 
Sbjct: 319 TVVLSRQIASLGIYPAIDPLDSTSRQLDPLIVGEDHYLVARKIQSILQRYKDLKDIIAIL 378

Query: 394 G 394
           G
Sbjct: 379 G 379


>gi|222152000|ref|YP_002561160.1| ATP synthase beta subunit [Macrococcus caseolyticus JCSC5402]
 gi|254808156|sp|B9E8E6|ATPB_MACCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222121129|dbj|BAH18464.1| ATP synthase beta subunit [Macrococcus caseolyticus JCSC5402]
          Length = 471

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 173/333 (51%), Gaps = 21/333 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157
              GRV N LG+ ID +  L  G +  + + +  P       +VE   +TGI+V+D+  P
Sbjct: 88  ATLGRVFNVLGEKIDLEPEL-DGTVRRDPIHRQAPKFEELSTKVEI-LETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+ 
Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFHE-MSDSG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            +KK+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 205 VIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+ +L ERI  +    G++T++ +V V  D++ DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAVFVPADDYTDPAPATAFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L R L E G YP VDPLAS SR    A   +E  ++   +   + ++ E +DI 
Sbjct: 323 LDATTNLERKLTEMGIYPAVDPLASTSRALTPAVVGEEHYEVARQVQATLQKYRELQDII 382

Query: 391 LIGGYRPGVDLILD---KAVHQVPIIYDFLKQS 420
            I     G+D + D   K V +   I  FL Q+
Sbjct: 383 AI----LGMDELSDEDKKTVSRARRIQFFLSQN 411


>gi|296317258|ref|NP_001171729.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Saccoglossus kowalevskii]
          Length = 523

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 150/273 (54%), Gaps = 18/273 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +   D    I  + P  +  +  ++  +TGI+V+D+  P C G 
Sbjct: 138 GRIINVIGEPIDERGPI-PTDRRSGIHQEAPEFVEMKVEQEILETGIKVVDLLAPYCKGG 196

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE    D  
Sbjct: 197 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIDLK 255

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD  K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 256 GDGSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 314

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 315 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 372

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 373 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 405


>gi|190575942|ref|YP_001973787.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia K279a]
 gi|226740680|sp|B2FHY8|ATPB_STRMK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190013864|emb|CAQ47502.1| putative ATP synthase beta chain [Stenotrophomonas maltophilia
           K279a]
          Length = 468

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D S EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRAAPSYEDQSPATELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+RS+A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|157694077|ref|YP_001488539.1| F0F1 ATP synthase subunit beta [Bacillus pumilus SAFR-032]
 gi|166990366|sp|A8FIB2|ATPB_BACP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157682835|gb|ABV63979.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Bacillus
           pumilus SAFR-032]
          Length = 473

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 161/302 (53%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG  ID D+ LG  +   + + +  P+ ++   E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGDNIDLDEPLGV-EAQRDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
           +K+ +V    +E P  R    LT +T+AE+F  + G +VL  +D+I RF  +  E++   
Sbjct: 209 EKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDELGQDVLFFIDNIYRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR LA +    +   +   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAIAREVQQTLQRYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|289804513|ref|ZP_06535142.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 426

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 46  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 104

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 105 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 164

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 165 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 224

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 225 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 282

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 283 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 342


>gi|296446169|ref|ZP_06888117.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b]
 gi|296256363|gb|EFH03442.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b]
          Length = 478

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
             GR+IN +G+P+D    +     +   + +  P+   Q  E    +TGI+V+D+  P  
Sbjct: 87  MLGRIINVIGEPVDEAGPIQT--TARRAIHQPAPSYAEQATEAQILETGIKVVDLLAPYA 144

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL--GDN 213
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   + +  G N
Sbjct: 145 KGGKIGLFGGAGVGKTVIIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVN 203

Query: 214 LK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
            K         K+ +V    +E P  R    LT +T+AE F  KG +VL  +D+I RF  
Sbjct: 204 KKPENGSAAGSKAALVYGQMNEPPGARARVALTGLTVAEDFRDKGQDVLFFVDNIFRFTQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 264 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             +  + LD   VLNR++AE+G YP VDPL S SR+   A   +E   V+  +   + R+
Sbjct: 322 PAASFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLSPAIVGEEHYDVARKVQSTLQRY 381

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 382 KSLQDIIAILG 392


>gi|256370203|ref|YP_003107714.1| ATP synthase subunit B [Brucella microti CCM 4915]
 gi|256000366|gb|ACU48765.1| ATP synthase subunit B [Brucella microti CCM 4915]
          Length = 521

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +D
Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429

Query: 389 IRLIGG 394
           I  I G
Sbjct: 430 IIAILG 435


>gi|238025753|ref|YP_002909984.1| F0F1 ATP synthase subunit beta [Burkholderia glumae BGR1]
 gi|237874947|gb|ACR27280.1| ATP synthase F1, beta subunit [Burkholderia glumae BGR1]
          Length = 464

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 168/330 (50%), Gaps = 12/330 (3%)

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           IC +G  + +  G LV + G+   +       GR+++ LG+PID    + + +    I  
Sbjct: 58  IC-LGASDGLRRGVLVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHQRSIHQ 115

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDC 186
           K P         +  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+   
Sbjct: 116 KAPAFDELSPSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHG 175

Query: 187 FDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              V    VGER RE  +F  +    N L K  +V    +E P  R    LT +T+AE+F
Sbjct: 176 GYSVFAG-VGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHF 234

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G
Sbjct: 235 RDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTG 292

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D   
Sbjct: 293 SITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNV 352

Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             +E   ++  +   + R++E RDI  I G
Sbjct: 353 IGEEHYTITRGVQQTLQRYKELRDIIAILG 382


>gi|190571537|ref|YP_001975895.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018939|ref|ZP_03334747.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|226740690|sp|B3CN17|ATPB_WOLPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190357809|emb|CAQ55265.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995890|gb|EEB56530.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 478

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 174/336 (51%), Gaps = 28/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG   +E + + PP+   Q++ E+   TGI+VID+  P   G
Sbjct: 87  GRIFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 145

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVID 203

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF   +  +VL  +D+I RF  +  
Sbjct: 204 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 263

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 264 EISALLGRIPSAVGYQPTLATDMGAMQERIASTTA--GSITSVQAIYVPADDLTDPAPAT 321

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             S LD   VL+R +AE G YP VDPL S S+ L+ +    +   + S +  ++  ++  
Sbjct: 322 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSL 381

Query: 387 RDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419
           +DI  I G     D   +I+D+A      I  FL Q
Sbjct: 382 QDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413


>gi|170724356|ref|YP_001752044.1| F0F1 ATP synthase subunit beta [Pseudomonas putida W619]
 gi|226740663|sp|B1JFU1|ATPB_PSEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169762359|gb|ACA75675.1| ATP synthase F1, beta subunit [Pseudomonas putida W619]
          Length = 458

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 158/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +    I    P   ++       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEAGPIGE-EERWGIHRDAPSFADQAGGNDLLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D     +E  +    + +++ R++E +DI  I G
Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETARGVQYVLQRYKELKDIIAILG 377


>gi|262281306|ref|ZP_06059087.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
 gi|262257132|gb|EEY75869.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
          Length = 464

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  S+ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNILQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|261346707|ref|ZP_05974351.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541]
 gi|282565107|gb|EFB70642.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541]
          Length = 460

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P         +  +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGDPIDM-----KGDIGEEERWSIHRSAPSYEELANSTELLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|209515776|ref|ZP_03264639.1| ATP synthase F1, beta subunit [Burkholderia sp. H160]
 gi|209503803|gb|EEA03796.1| ATP synthase F1, beta subunit [Burkholderia sp. H160]
          Length = 464

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPISS-ETTRAIHQKAPAFDQLSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382


>gi|167724890|ref|ZP_02408126.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei DM98]
          Length = 364

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 12/270 (4%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFA 182
           I    PP   ++     F TGI+VID+  PL  G +  +F G+G+GK+ L+     +M  
Sbjct: 11  IHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVE 70

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           R       + + +GER RE  E + D  G   L ++V+V    +E P  R   PLTA+ I
Sbjct: 71  RYRGIS--VFAGIGERSREGDEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAI 128

Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF   +  NVLL++D++ RF  +  E++   G LP   GY  ++ SE+  L ERI  +
Sbjct: 129 AEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--A 186

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             E   +TA+ +V V  D+  DP   ++ + +D  +VL+R++A EG YP +DP+AS S L
Sbjct: 187 SVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSIL 246

Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            D     +    V+  +  +I  + E +D+
Sbjct: 247 LDPLVVGEAHVEVAIEVRRVIEHYRELQDV 276


>gi|62290664|ref|YP_222457.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 1 str. 9-941]
 gi|82700579|ref|YP_415153.1| F0F1 ATP synthase subunit beta [Brucella melitensis biovar Abortus
           2308]
 gi|189024876|ref|YP_001935644.1| F0F1 ATP synthase subunit beta [Brucella abortus S19]
 gi|237816165|ref|ZP_04595160.1| ATP synthase F1, beta subunit [Brucella abortus str. 2308 A]
 gi|254694444|ref|ZP_05156272.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 3 str. Tulya]
 gi|254698103|ref|ZP_05159931.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254730987|ref|ZP_05189565.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 4 str. 292]
 gi|260547100|ref|ZP_05822838.1| ATP synthase subunit beta [Brucella abortus NCTC 8038]
 gi|260758710|ref|ZP_05871058.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260762544|ref|ZP_05874881.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261214758|ref|ZP_05929039.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|81309373|sp|Q57B88|ATPB_BRUAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573512|sp|Q2YLE6|ATPB_BRUA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|62196796|gb|AAX75096.1| AtpD, ATP synthase F1, beta subunit [Brucella abortus bv. 1 str.
           9-941]
 gi|82616680|emb|CAJ11763.1| Antifreeze protein, type I:H+-transporting two-sector ATPase,
           alpha/beta subunit, central region:H+-transporting
           two-sector A [Brucella melitensis biovar Abortus 2308]
 gi|189020448|gb|ACD73170.1| ATP synthase subunit B [Brucella abortus S19]
 gi|237788627|gb|EEP62840.1| ATP synthase F1, beta subunit [Brucella abortus str. 2308 A]
 gi|260095465|gb|EEW79343.1| ATP synthase subunit beta [Brucella abortus NCTC 8038]
 gi|260669028|gb|EEX55968.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260672970|gb|EEX59791.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260916365|gb|EEX83226.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 3 str.
           Tulya]
          Length = 521

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +D
Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMIDPKVVGEEHYAVARQVQSILQRYKALQD 429

Query: 389 IRLIGG 394
           I  I G
Sbjct: 430 IIAILG 435


>gi|254719787|ref|ZP_05181598.1| F0F1 ATP synthase subunit beta [Brucella sp. 83/13]
 gi|265984806|ref|ZP_06097541.1| ATP synthase subunit beta [Brucella sp. 83/13]
 gi|306839484|ref|ZP_07472292.1| ATP synthase F1, beta subunit [Brucella sp. NF 2653]
 gi|306841512|ref|ZP_07474211.1| ATP synthase F1, beta subunit [Brucella sp. BO2]
 gi|264663398|gb|EEZ33659.1| ATP synthase subunit beta [Brucella sp. 83/13]
 gi|306288423|gb|EFM59780.1| ATP synthase F1, beta subunit [Brucella sp. BO2]
 gi|306405429|gb|EFM61700.1| ATP synthase F1, beta subunit [Brucella sp. NF 2653]
          Length = 521

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQSAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +D
Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429

Query: 389 IRLIGG 394
           I  I G
Sbjct: 430 IIAILG 435


>gi|156846713|ref|XP_001646243.1| hypothetical protein Kpol_1013p57 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116917|gb|EDO18385.1| hypothetical protein Kpol_1013p57 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 505

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/308 (35%), Positives = 166/308 (53%), Gaps = 22/308 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+IN +G+PID    + K  L   I ++ PP+   Q  E +  +TGI+V+D+  P   
Sbjct: 119 LGRIINVIGEPIDERGPI-KSKLRKPIHAE-PPSFVEQSTEAEVLETGIKVVDLLAPYAR 176

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----D 208
           G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    +
Sbjct: 177 GGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETGVIN 235

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
             GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  
Sbjct: 236 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGS 293

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +
Sbjct: 294 EVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPAT 351

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386
             + LD   VL+R ++E G YP VDPL S SRL D A    E   V++ +   +  ++  
Sbjct: 352 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATRVQETLQAYKSL 411

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 412 QDIIAILG 419


>gi|332995860|gb|AEF05915.1| F0F1 ATP synthase subunit beta [Alteromonas sp. SN2]
          Length = 461

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ D  M I    P   ++    +  +TGI+VID+  P  
Sbjct: 84  ATLGRIMDVLGNPIDEAGPIGEED-RMSIHRAAPSYEDQSSSVELLETGIKVIDLVCPFA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L 
Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDSNVLD 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G 
Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 321 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 380


>gi|289743389|gb|ADD20442.1| F0F1-type ATP synthase beta subunit [Glossina morsitans morsitans]
          Length = 507

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 161/314 (51%), Gaps = 15/314 (4%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D    I ++ P  +     ++   TGI+V+
Sbjct: 111 IRIPVGAETLGRIINVIGEPIDERGPV-PTDKRAPIHAEAPEFVEMSVEQEILVTGIKVV 169

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREF 205
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      E 
Sbjct: 170 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEM 229

Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R
Sbjct: 230 IESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 289

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 290 FTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLT 347

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++
Sbjct: 348 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGHEHYNVARGVQKIL 407

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 408 QDYKSLQDIIAILG 421


>gi|254689952|ref|ZP_05153206.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 6 str. 870]
 gi|256258207|ref|ZP_05463743.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|260755487|ref|ZP_05867835.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260884508|ref|ZP_05896122.1| ATP synthase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|297249056|ref|ZP_06932764.1| ATP synthase F1, beta subunit [Brucella abortus bv. 5 str. B3196]
 gi|260675595|gb|EEX62416.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260874036|gb|EEX81105.1| ATP synthase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|297174189|gb|EFH33546.1| ATP synthase F1, beta subunit [Brucella abortus bv. 5 str. B3196]
          Length = 521

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +D
Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMIDPKVVGEEHYAVARQVQSILQRYKALQD 429

Query: 389 IRLIGG 394
           I  I G
Sbjct: 430 IIAILG 435


>gi|258690456|gb|ACV87990.1| ATP synthase beta subunit [Haliclona (Haliclona) sp. KJP-2009]
          Length = 427

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 161/314 (51%), Gaps = 15/314 (4%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +G    +  I ++ P   +    ++   TGI+V+
Sbjct: 55  IRIPVGPKTLGRIINVIGEPIDERGPVGSEHYA-NIHAEAPNFEDMSTDQEILVTGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L++    +         + + VGER RE  +   + 
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLITELINNVAKAHGGYSVFAGVGERTREGNDLYYEM 173

Query: 210 -------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                  L DN  K  +V    +E P  R    LT +T+AEYF   +G +VL  +D+I R
Sbjct: 174 ITSGVISLKDNSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLFFIDNIFR 233

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 234 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 291

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++
Sbjct: 292 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGQEHYGVARGVQKIL 351

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 352 QDYKSLQDIIAILG 365


>gi|17986535|ref|NP_539169.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M]
 gi|23502652|ref|NP_698779.1| F0F1 ATP synthase subunit beta [Brucella suis 1330]
 gi|148559326|ref|YP_001259638.1| F0F1 ATP synthase subunit beta [Brucella ovis ATCC 25840]
 gi|161619719|ref|YP_001593606.1| F0F1 ATP synthase subunit beta [Brucella canis ATCC 23365]
 gi|163845375|ref|YP_001623030.1| F0F1 ATP synthase subunit beta [Brucella suis ATCC 23445]
 gi|225628353|ref|ZP_03786387.1| ATP synthase F1, beta subunit [Brucella ceti str. Cudo]
 gi|225853243|ref|YP_002733476.1| F0F1 ATP synthase subunit beta [Brucella melitensis ATCC 23457]
 gi|254700443|ref|ZP_05162271.1| F0F1 ATP synthase subunit beta [Brucella suis bv. 5 str. 513]
 gi|254703564|ref|ZP_05165392.1| F0F1 ATP synthase subunit beta [Brucella suis bv. 3 str. 686]
 gi|254708349|ref|ZP_05170177.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis M163/99/10]
 gi|254714641|ref|ZP_05176452.1| F0F1 ATP synthase subunit beta [Brucella ceti M644/93/1]
 gi|254717539|ref|ZP_05179350.1| F0F1 ATP synthase subunit beta [Brucella ceti M13/05/1]
 gi|256045395|ref|ZP_05448289.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256114363|ref|ZP_05455096.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|256160496|ref|ZP_05458185.1| F0F1 ATP synthase subunit beta [Brucella ceti M490/95/1]
 gi|256255702|ref|ZP_05461238.1| F0F1 ATP synthase subunit beta [Brucella ceti B1/94]
 gi|256263269|ref|ZP_05465801.1| ATP synthase subunit beta [Brucella melitensis bv. 2 str. 63/9]
 gi|260167999|ref|ZP_05754810.1| F0F1 ATP synthase subunit beta [Brucella sp. F5/99]
 gi|260565713|ref|ZP_05836196.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M]
 gi|260568870|ref|ZP_05839338.1| ATP synthase subunit beta [Brucella suis bv. 4 str. 40]
 gi|261219373|ref|ZP_05933654.1| ATP synthase subunit beta [Brucella ceti M13/05/1]
 gi|261222913|ref|ZP_05937194.1| ATP synthase subunit beta [Brucella ceti B1/94]
 gi|261315848|ref|ZP_05955045.1| ATP synthase subunit beta [Brucella pinnipedialis M163/99/10]
 gi|261322435|ref|ZP_05961632.1| ATP synthase subunit beta [Brucella ceti M644/93/1]
 gi|261750944|ref|ZP_05994653.1| ATP synthase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261754198|ref|ZP_05997907.1| ATP synthase subunit beta [Brucella suis bv. 3 str. 686]
 gi|261757444|ref|ZP_06001153.1| ATP synthase subunit beta [Brucella sp. F5/99]
 gi|265991824|ref|ZP_06104381.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995663|ref|ZP_06108220.1| ATP synthase subunit beta [Brucella melitensis bv. 3 str. Ether]
 gi|265998872|ref|ZP_06111429.1| ATP synthase subunit beta [Brucella ceti M490/95/1]
 gi|294851037|ref|ZP_06791713.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
 gi|306844779|ref|ZP_07477364.1| ATP synthase F1, beta subunit [Brucella sp. BO1]
 gi|81752067|sp|Q8FYR5|ATPB_BRUSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81852461|sp|Q8YJ35|ATPB_BRUME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358262|sp|A9M837|ATPB_BRUC2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358263|sp|A5VSE1|ATPB_BRUO2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358264|sp|A9WWS2|ATPB_BRUSI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|17982141|gb|AAL51433.1| ATP synthase beta chain [Brucella melitensis bv. 1 str. 16M]
 gi|23348660|gb|AAN30694.1| ATP synthase F1, beta subunit [Brucella suis 1330]
 gi|148370583|gb|ABQ60562.1| ATP synthase F1, beta subunit [Brucella ovis ATCC 25840]
 gi|161336530|gb|ABX62835.1| ATP synthase F1, beta subunit [Brucella canis ATCC 23365]
 gi|163676098|gb|ABY40208.1| ATP synthase F1, beta subunit [Brucella suis ATCC 23445]
 gi|225616199|gb|EEH13247.1| ATP synthase F1, beta subunit [Brucella ceti str. Cudo]
 gi|225641608|gb|ACO01522.1| ATP synthase F1, beta subunit [Brucella melitensis ATCC 23457]
 gi|260151086|gb|EEW86181.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M]
 gi|260154254|gb|EEW89336.1| ATP synthase subunit beta [Brucella suis bv. 4 str. 40]
 gi|260921497|gb|EEX88150.1| ATP synthase subunit beta [Brucella ceti B1/94]
 gi|260924462|gb|EEX91030.1| ATP synthase subunit beta [Brucella ceti M13/05/1]
 gi|261295125|gb|EEX98621.1| ATP synthase subunit beta [Brucella ceti M644/93/1]
 gi|261304874|gb|EEY08371.1| ATP synthase subunit beta [Brucella pinnipedialis M163/99/10]
 gi|261737428|gb|EEY25424.1| ATP synthase subunit beta [Brucella sp. F5/99]
 gi|261740697|gb|EEY28623.1| ATP synthase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261743951|gb|EEY31877.1| ATP synthase subunit beta [Brucella suis bv. 3 str. 686]
 gi|262553561|gb|EEZ09330.1| ATP synthase subunit beta [Brucella ceti M490/95/1]
 gi|262766947|gb|EEZ12565.1| ATP synthase subunit beta [Brucella melitensis bv. 3 str. Ether]
 gi|263002780|gb|EEZ15183.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093233|gb|EEZ17330.1| ATP synthase subunit beta [Brucella melitensis bv. 2 str. 63/9]
 gi|294821680|gb|EFG38676.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
 gi|306274951|gb|EFM56721.1| ATP synthase F1, beta subunit [Brucella sp. BO1]
 gi|326409802|gb|ADZ66867.1| F0F1 ATP synthase subunit beta [Brucella melitensis M28]
 gi|326539519|gb|ADZ87734.1| ATP synthase F1, beta subunit [Brucella melitensis M5-90]
          Length = 521

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +D
Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429

Query: 389 IRLIGG 394
           I  I G
Sbjct: 430 IIAILG 435


>gi|70733499|ref|YP_263274.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens Pf-5]
 gi|118573723|sp|Q4K3A9|ATPB_PSEF5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|68347798|gb|AAY95404.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens Pf-5]
          Length = 458

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +    I    P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEAGPIGE-EERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D     +E  +    + +++ R++E +DI  I G
Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETARGVQYVLQRYKELKDIIAILG 377


>gi|328852582|gb|EGG01727.1| hypothetical protein MELLADRAFT_45062 [Melampsora larici-populina
           98AG31]
          Length = 542

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 165/312 (52%), Gaps = 18/312 (5%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GR++N +G+PID    +      M I ++ P  +++  + +   TGI+V+D+ 
Sbjct: 147 PVGPECLGRIMNVIGEPIDERGPINT-KTQMPIHAEPPSFIDQSTIPEVLVTGIKVVDLL 205

Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+  G+G+GK+     L++  A++     V    VGER RE      E IE
Sbjct: 206 APYARGGKIGLLGGAGVGKTVFIQELINNVAKAHGGYSVFCG-VGERTREGNDLYHEMIE 264

Query: 208 D---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
                L ++  K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF 
Sbjct: 265 TGVIQLKNDKSKAALVFGQMNEPPGARARVALTGLTLAEYFRDEEGQDVLLFIDNIFRFT 324

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP
Sbjct: 325 QAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTRKGSITSVQAVYVPADDLTDP 382

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R ++E G YP VDPL S SRL D     +E   L +++  L+  
Sbjct: 383 APATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDPRIVGEEHYNLATAIQKLLQD 442

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 443 YKGLQDIIAILG 454


>gi|295678133|ref|YP_003606657.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1002]
 gi|295437976|gb|ADG17146.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1002]
          Length = 464

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPISS-ETTRAIHQKAPAFDQLSPSTELLETGIKVIDLICPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382


>gi|258690458|gb|ACV87991.1| ATP synthase beta subunit [Damiria sp. KJP-2009]
          Length = 427

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 161/307 (52%), Gaps = 21/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    + + D+   I +  P  ++    ++   TGI+V+D+  P   G 
Sbjct: 65  GRIINVIGEPIDERGPV-ETDMVASIHADAPEFVDMNVNQEILVTGIKVVDLLAPYAKGG 123

Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209
           +IG+F G+G+GK+ ++         A   C    + + VGER RE  +   +        
Sbjct: 124 KIGLFGGAGVGKTVVIMELINNVAKAHGGC---SVFAGVGERTREGNDLYHEMIQSGVIS 180

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    L+ +T+AEYF  K G +VLL +D+I RF  +  E
Sbjct: 181 LKDDTSKVALVYGQMNEPPGARARVALSGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSE 240

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 241 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAVFVPADDLTDPAPATT 298

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD   VL+R+++E G YP VDPL S SR+ D     +E   V+  +  ++  +   +
Sbjct: 299 FAHLDAITVLSRAISELGIYPAVDPLDSTSRIMDPYIVGEEHYNVARGVQKILQDYRSLQ 358

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 359 DIIAILG 365


>gi|315618560|gb|EFU99146.1| ATP synthase F1, beta subunit [Escherichia coli 3431]
          Length = 429

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 52  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 110

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 111 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 170

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 171 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 230

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 231 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 288

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 289 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 348


>gi|300115592|ref|YP_003762167.1| ATP synthase F1 subunit beta [Nitrosococcus watsonii C-113]
 gi|299541529|gb|ADJ29846.1| ATP synthase F1, beta subunit [Nitrosococcus watsonii C-113]
          Length = 458

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D    +G+ +    I  K P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGEPVDEAGPIGEEE-RWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +      L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E   V+ ++   + R++E +DI  I G
Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYQVARAVQGNLQRYKELKDIIAILG 377


>gi|219870177|gb|ACL50294.1| atpD beta synthase chain [Pseudomonas chlororaphis subsp.
           aurantiaca]
          Length = 297

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +    I    P    +       +TGI+VID+  P   G
Sbjct: 1   LGRIMDVLGNPIDEAGPIGE-EERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKG 59

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 60  GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 119

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G +P
Sbjct: 120 ALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMP 179

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 180 SAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 237

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E  +    + +++ R++E +DI  I G
Sbjct: 238 LSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETARGVQYVLQRYKELKDIIAILG 295


>gi|212637833|ref|YP_002314358.1| F0F1 ATP synthase subunit beta [Shewanella piezotolerans WP3]
 gi|226740674|sp|B8CVU5|ATPB_SHEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|212559317|gb|ACJ31771.1| ATP synthase F1, beta subunit [Shewanella piezotolerans WP3]
          Length = 458

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 14/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+P+D    +G+ D  + I  + P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGQPVDEAGPIGEEDRYV-IHREAPSYEDQSNTTELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNL 214
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F   +ED     L
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SGVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSALLG 258

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R++A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 317 TVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDIIAIL 376

Query: 394 G 394
           G
Sbjct: 377 G 377


>gi|50288781|ref|XP_446820.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526129|emb|CAG59751.1| unnamed protein product [Candida glabrata]
          Length = 507

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +    L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 121 LGRIINVIGEPIDERGPI-NSKLRKPIHADPPSFAEQSTAAEVLETGIKVVDLLAPYARG 179

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 180 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 238

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 239 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 296

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 297 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 354

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+RS++E G YP VDPL S SRL D A   +E   + + +   +  ++  +
Sbjct: 355 FAHLDATTVLSRSISELGIYPAVDPLDSKSRLLDAAVVGEEHYNVATKVQETLQTYKSLQ 414

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 415 DIIAILG 421


>gi|91178118|gb|ABE27294.1| mitochondrial F-ATPase beta subunit [Kluyveromyces marxianus]
          Length = 337

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  +   I +  P  + +    +  +TGI+V+D+  P   G
Sbjct: 19  LGRIINVIGEPIDERGPI-KSKMRKPIHADPPSFVEQSTAAEVLETGIKVVDLLAPYARG 77

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 78  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 136

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 194

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  +
Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATQVQQTLQAYKSLQ 312

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 313 DIIAILG 319


>gi|302536956|ref|ZP_07289298.1| ATP synthase F1, beta subunit [Streptomyces sp. C]
 gi|302445851|gb|EFL17667.1| ATP synthase F1, beta subunit [Streptomyces sp. C]
          Length = 480

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 178/328 (54%), Gaps = 17/328 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  ++  +      I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNYPEANAEVTERWPIHRKAPSFDELESKTEMFETGVKVIDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+ +GD+  + K+
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MGDSGVIDKT 219

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I R+  +  E++T  G +
Sbjct: 220 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRYTQAGSEVSTLLGRM 279

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 280 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 337

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R ++E+G YP VDPL S SR+ D  + +AD       +  ++ ++++ +DI  I   
Sbjct: 338 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYAAAMRVKGILQKYKDLQDIIAI--- 394

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420
             G+D + ++    VH+   +  FL Q+
Sbjct: 395 -LGIDELGEEDKLVVHRARRVERFLSQN 421


>gi|183597137|ref|ZP_02958630.1| hypothetical protein PROSTU_00376 [Providencia stuartii ATCC 25827]
 gi|188023447|gb|EDU61487.1| hypothetical protein PROSTU_00376 [Providencia stuartii ATCC 25827]
          Length = 460

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG PID      KGD+  E    I    P         +  +TGI+V+D+ 
Sbjct: 83  ATLGRIMNVLGDPIDM-----KGDIGEEERWSIHRAAPSYEELSSSTELLETGIKVMDLI 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|331221317|ref|XP_003323333.1| ATP synthase subunit beta [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309302323|gb|EFP78914.1| ATP synthase subunit beta [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 542

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 166/312 (53%), Gaps = 18/312 (5%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GR++N +G+PID    + K    M I ++ P  +++  + +   TGI+V+D+ 
Sbjct: 147 PVGPECLGRIMNVIGEPIDERGPI-KTKTMMPIHAEPPEFIDQSTIPEVLVTGIKVVDLL 205

Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+  G+G+GK+     L++  A++     V    VGER RE      E IE
Sbjct: 206 APYARGGKIGLLGGAGVGKTVFIQELINNVAKAHGGYSVFCG-VGERTREGNDLYHEMIE 264

Query: 208 D---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
                L ++  K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF 
Sbjct: 265 TGVIQLNNDKSKAALVFGQMNEPPGARARVALTGLTLAEYFRDEEGQDVLLFIDNIFRFT 324

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP
Sbjct: 325 QAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTRKGSITSVQAVYVPADDLTDP 382

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R ++E G YP VDPL S SRL D +    +   L +++  L+  
Sbjct: 383 APATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDPRIVGPEHYNLATAVQKLLQD 442

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 443 YKGLQDIIAILG 454


>gi|297626245|ref|YP_003688008.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922010|emb|CBL56572.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 483

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           G V NA G  ++ D +  K D    I  + PPA +    E +  +TGI+V+D+ TP   G
Sbjct: 103 GHVWNATGDLLNADPATVKIDERWSI-HREPPAFDALEPESQMLETGIKVLDLLTPYVQG 161

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +    N LK +
Sbjct: 162 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLIHEMEEANVLKDT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 222 ALVFGQMDEPPGTRLRVALSALTMAEYFRDVENQDVLLFIDNIFRFTQAGSEVSTLLGRM 281

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + LD   
Sbjct: 282 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATT 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A  G YP VDPL+S SR LA +    +   + + +  ++ R +E +DI  I G
Sbjct: 340 ELSRDIASRGLYPAVDPLSSTSRILAPEYVGKEHYDVATEVKQILQRNKELQDIIAILG 398


>gi|312142787|ref|YP_003994233.1| ATP synthase F1, beta subunit [Halanaerobium sp. 'sapolanicus']
 gi|311903438|gb|ADQ13879.1| ATP synthase F1, beta subunit [Halanaerobium sp. 'sapolanicus']
          Length = 470

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID    +   +  M I    P    ++   + F+TGI+VID+  P   G
Sbjct: 90  LGRIFNVLGETIDNRGGVDTEE-RMPIHRSAPKFEEQETSTELFETGIKVIDLLAPYTRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            ++G+F G+G+GK+ L+     +   +     + S VGER RE  + ++E    D L K 
Sbjct: 149 GKVGLFGGAGVGKTVLIQELINNIATEHGGYSVFSGVGERTREGNDLWLEFQEADVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 209 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDEAGQDVLLFIDNIFRFIQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  ++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 269 PSAVGYQPTLAYDVGTLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S S + D     +E   V+  +  ++  +++ +DI  I G
Sbjct: 327 VLSRDIVEKGIYPAVDPLDSTSNILDPRILGEEHYNVARQVQEILQEYKDLQDIIAILG 385


>gi|183602788|ref|ZP_02964151.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683116|ref|YP_002469499.1| ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241191445|ref|YP_002968839.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196851|ref|YP_002970406.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|254808132|sp|B8DWS2|ATPB_BIFA0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|183218026|gb|EDT88674.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219620766|gb|ACL28923.1| ATP synthase F1, beta subunit [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249837|gb|ACS46777.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251405|gb|ACS48344.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289177571|gb|ADC84817.1| ATP synthase B chain [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295794438|gb|ADG33973.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 495

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 142 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 201

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 202 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 261

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 262 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 319

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D  + 
Sbjct: 320 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 379

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 380 GQAHYDCANRVKAILQRNKELQDIIALIG 408


>gi|50083469|ref|YP_044979.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ADP1]
 gi|299771942|ref|YP_003733968.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. DR1]
 gi|81393960|sp|Q6FFK0|ATPB_ACIAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49529445|emb|CAG67157.1| membrane-bound ATP synthase , F1 sector, beta-subunit
           [Acinetobacter sp. ADP1]
 gi|298702030|gb|ADI92595.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. DR1]
          Length = 464

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  S+ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|91178110|gb|ABE27290.1| mitochondrial F-ATPase beta subunit [Candida glabrata]
          Length = 337

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +    L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 19  LGRIINVIGEPIDERGPI-NSKLRKPIHADPPSFAEQSTAAEVLETGIKVVDLLAPYARG 77

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 78  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 136

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 194

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+RS++E G YP VDPL S SRL D A   +E   + + +   +  ++  +
Sbjct: 253 FAHLDATTVLSRSISELGIYPAVDPLDSKSRLLDAAVVGEEHYNVATKVQETLQTYKSLQ 312

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 313 DIIAILG 319


>gi|256061823|ref|ZP_05451958.1| F0F1 ATP synthase subunit beta [Brucella neotomae 5K33]
 gi|261325827|ref|ZP_05965024.1| ATP synthase subunit beta [Brucella neotomae 5K33]
 gi|261301807|gb|EEY05304.1| ATP synthase subunit beta [Brucella neotomae 5K33]
          Length = 521

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K   +  I    P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    L+ +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +D
Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429

Query: 389 IRLIGG 394
           I  I G
Sbjct: 430 IIAILG 435


>gi|86747391|ref|YP_483887.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris HaA2]
 gi|118573733|sp|Q2J3I4|ATPB_RHOP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86570419|gb|ABD04976.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris HaA2]
          Length = 476

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +    L   I ++ P   ++    +   TGI+V+D+  P   G 
Sbjct: 90  GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211
           +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +    G
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    L+ +T+AE+F  +G +VL  +D+I RF  +  E++ 
Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390
           LD   VLNR+++E+G YP VDPL S SR+       +E    + +   ++ +++  +DI 
Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQKYKSLQDII 386

Query: 391 LIGG 394
            I G
Sbjct: 387 AILG 390


>gi|91773224|ref|YP_565916.1| V-type ATP synthase subunit B [Methanococcoides burtonii DSM 6242]
 gi|121689234|sp|Q12WL0|VATB_METBU RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|91712239|gb|ABE52166.1| V-type ATP synthase beta chain [Methanococcoides burtonii DSM 6242]
          Length = 460

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 181/353 (51%), Gaps = 34/353 (9%)

Query: 60  GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+  + D+V +      VG+ EE     +VF     ++  S    GR+++  G+P+DG
Sbjct: 42  GQVLDTSADMVVVQVFEGTVGLNEE---SGVVFSGETIKLPVSKDMLGRILSGAGEPLDG 98

Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
                 D  +     SM   S++PP       E   +TGI  ID    L  GQ++ +F+G
Sbjct: 99  GPRIIPDKRVDINGASMNPYSRMPP-------EDFIQTGISTIDGTNTLVRGQKLPIFSG 151

Query: 170 SGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           SG+  + +    AR      SD    V+ + +G    E + F++D+     L+++VV + 
Sbjct: 152 SGLPHNEIALQIARQAKVPGSDEPFAVVFAAMGITNEEAQYFMDDFEKTGALERAVVFLN 211

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +D+  + R + P  A+T AEY + + D +VL+IL  IT +  ++R++     E+P  RG
Sbjct: 212 LADDPAVERIVTPRMALTAAEYLAYEHDMHVLVILTDITNYCEALRQMGAAREEVPGRRG 271

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  L ER G  +  KG++T    + + GD+   PI D    I +G IV++R 
Sbjct: 272 YPGYMYTDLASLYERAGVIKGIKGSVTQFSILTMPGDDITHPIPDLSGYITEGQIVVSRE 331

Query: 342 LAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           L  +G YPP++ L S+SRL +    +  + D+ K VS    +   + E RD+R
Sbjct: 332 LHRKGIYPPINVLPSLSRLMNSGIGEGKTRDDHKAVSD--QMYAAYAEGRDLR 382


>gi|88855326|ref|ZP_01129990.1| ATP synthase subunit B [marine actinobacterium PHSC20C1]
 gi|88815233|gb|EAR25091.1| ATP synthase subunit B [marine actinobacterium PHSC20C1]
          Length = 506

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 167/304 (54%), Gaps = 14/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G+V +  G+ ++ D+       ++EI     + + PPA ++ +   + F+TGI+VID+ T
Sbjct: 119 GKVFSVTGEILNADEDGKVNGETVEITERWPIHRKPPAFDQLESKTELFETGIKVIDLLT 178

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I +     
Sbjct: 179 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIAEMDEAG 238

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
             +K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 239 VFEKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVST 298

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 299 LLGRMPSAVGYQPNLADEMGILQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAH 356

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A +G YP VDPL S SR+ D  +  AD  ++ +++  ++ + +E ++I 
Sbjct: 357 LDATTELSREIASKGLYPAVDPLTSTSRILDPRYLGADHYRVATNVKQILQKNKELQEII 416

Query: 391 LIGG 394
            I G
Sbjct: 417 AILG 420


>gi|258690306|gb|ACV87915.1| ATP synthase beta subunit [Dysidea sp. KJP-2009]
          Length = 427

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 15/305 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +    +S  I  + P   +    ++  +TGI+V+D+  P   G
Sbjct: 64  LGRIINVIGEPIDERGPVETKSMS-PIHQEAPEFADMNVDQEILETGIKVVDLLAPYTKG 122

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY-------LG 211
            +IG+F G+G+GK+ L+     +         + + VGER RE  +   +        L 
Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVALAHGGYSVFAGVGERTREGNDLYHEMITSGVISLK 182

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 183 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 242

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 243 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIFVPADDLTDPAPATTFA 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R+++E G YP VDPL S SR+ D     +E   V+  +  ++  ++  +DI
Sbjct: 301 HLDAMTVLSRAISELGIYPAVDPLDSTSRIMDPNVVGEEHYNVARGVQKVLQDYKSLQDI 360

Query: 390 RLIGG 394
             I G
Sbjct: 361 IAILG 365


>gi|323138829|ref|ZP_08073892.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242]
 gi|322395871|gb|EFX98409.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242]
          Length = 475

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 157/296 (53%), Gaps = 12/296 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR++ ALG+P D   +    D+    + + PP ++R+    + F+TGI+ ID+  PL  
Sbjct: 94  LGRLLGALGEPADNGPAFPL-DIERRPIHRAPPEISRRGSSLEIFRTGIKAIDLLAPLVK 152

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215
           G +  +F G+G+GK+ L+    R+       IS+   +GER RE  E + + LG +  LK
Sbjct: 153 GGKAAMFGGAGVGKTVLIMELIRTTVELHSGISVFGGIGERSREGHELLLE-LGQSGVLK 211

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ +V    +E P  R  A LTA+ IAEYF  +  +NVLL++D++ R   +  E++   G
Sbjct: 212 QTALVFGQMNEPPGARWRAGLTALAIAEYFRDTAHENVLLLVDNVYRLVQAGGEVSGLLG 271

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            LP   GY  ++ +E+    ERI  +      IT++ +V V  D+  DP    + S LD 
Sbjct: 272 RLPSRVGYQPTLSTEIAEFEERI--ASVAGAAITSIQAVYVPADDFTDPAVAEIFSHLDS 329

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDI 389
            IVL+R +A EG YP +DPLAS S L D     D   +    +   I  + E ++I
Sbjct: 330 SIVLSRDMASEGMYPAIDPLASTSSLLDPRLVGDVHYRTAQDVRSAIAHYRELQEI 385


>gi|260431384|ref|ZP_05785355.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415212|gb|EEX08471.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 463

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 9/293 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  G+P+DG       D +  +    P   +R    +  +TGI+VID+ +P+  G 
Sbjct: 90  GRMLDVFGRPLDGLPEPAS-DCTRPLHRPPPALADRSVRAEVLETGIKVIDLLSPIERGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KSV 218
           + G+F G+G+GK+ L++    +       +SL   +GER RE  E   +     ++ K+V
Sbjct: 149 KTGLFGGAGVGKTVLITELINNTVQSHKGVSLFCGIGERSREAEELYREMGAAGVRDKTV 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           ++    +E+P +R +   TA+T+AEYF      +VLL++D+I RF  +  E++   G +P
Sbjct: 209 MLFGQMNEAPGVRFLVGHTALTMAEYFRDDAHRDVLLLIDNIFRFVQAGSEVSGMLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            + GY  ++ +EL  L ERI  +    G IT++ +V V  D+  DP A  + S L   +V
Sbjct: 269 SSVGYQPTLATELAALQERI--ASTRHGAITSIQAVYVPADDFTDPAAAHIFSHLSASVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP VDPL+S S  L+          +  ++   +  +EE RDI
Sbjct: 327 LSRKRASEGLYPAVDPLSSTSVMLSPSVVGQRHYDIARAVRSTLAEYEELRDI 379


>gi|254509593|ref|ZP_05121660.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium KLH11]
 gi|221533304|gb|EEE36292.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium KLH11]
          Length = 474

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 164/311 (52%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR++N +G PID    +   +     + +  P  + Q  E     TGI+V+D+  P 
Sbjct: 84  ATLGRILNVVGDPIDEKGPVEASE--ARAIHQPAPTFDEQSTESEVLVTGIKVVDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDY 209
             G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  
Sbjct: 142 AKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESN 199

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
           +   DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  
Sbjct: 200 VIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP 
Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKSGSITSVQAIYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRF 383
             +  + LD   VLNR+++E+G YP VDPL S SRL D A   +E   V++ +  ++ R+
Sbjct: 318 PATSFAHLDATTVLNRAISEKGIYPAVDPLDSSSRLLDPAIVGEEHYAVATDVQQILQRY 377

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 378 KSLQDIIAILG 388


>gi|307942824|ref|ZP_07658169.1| ATP synthase F1, beta subunit [Roseibium sp. TrichSKD4]
 gi|307773620|gb|EFO32836.1| ATP synthase F1, beta subunit [Roseibium sp. TrichSKD4]
          Length = 474

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K D    I    P  + +    +   TGI+V+D+  P   G
Sbjct: 87  LGRIMNVIGEPVDEAGEI-KHDDKRGIHQDAPEFIEQSTEAEILVTGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +   
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKE 204

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +TIAE F  +G +VL  +D+I RF  +  E+
Sbjct: 205 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDQGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP   S  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTHKGSITSVQAVYVPADDLTDPAPASTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VLNRS+AE+G YP VDPL S SR+       +E  +   ++   + R++  +D
Sbjct: 323 AHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLSANIIGEEHYETARAVQVTLQRYKALQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|262374657|ref|ZP_06067930.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205]
 gi|262310447|gb|EEY91538.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205]
          Length = 464

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  S+ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|34496127|ref|NP_900342.1| F0F1 ATP synthase subunit beta [Chromobacterium violaceum ATCC
           12472]
 gi|81656847|sp|Q7P095|ATPB_CHRVO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|34101981|gb|AAQ58348.1| H+-transporting two-sector ATPase, beta subunit [Chromobacterium
           violaceum ATCC 12472]
          Length = 465

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG P+D    +   D    I    P            +TGI+VID+  P 
Sbjct: 80  AATLGRIMDVLGNPVDEAGPVAT-DARRAIHQAAPKFDELSAAADILETGIKVIDLLCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AE+F      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEHFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKDGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D     DE   V+  +   + R++E 
Sbjct: 316 TFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYTVARGVQSTLQRYKEL 375

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 376 RDIIAILG 383


>gi|156364605|ref|XP_001626437.1| predicted protein [Nematostella vectensis]
 gi|156213313|gb|EDO34337.1| predicted protein [Nematostella vectensis]
          Length = 416

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + + D    I ++ P  +     ++  +TGI+V+D+  P   G
Sbjct: 29  LGRIINVIGEPIDERGPV-ETDKRAAIHAEAPEFVEMSTEQEILETGIKVVDLLAPYAKG 87

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +        L
Sbjct: 88  GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIMSGVINL 146

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF  +  E+
Sbjct: 147 KDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 206

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 207 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 264

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D      E  ++   +  ++  ++  +D
Sbjct: 265 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEIARGVQKILQDYKSLQD 324

Query: 389 IRLIGG 394
           I  I G
Sbjct: 325 IIAILG 330


>gi|90409883|ref|ZP_01217900.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
 gi|90329236|gb|EAS45493.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
          Length = 461

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG PID    +G+   S  I  + P    +    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGHPIDECGEIGE-KTSYPIHREPPSYEEQANSTELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +   KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTHKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E  ++   +  ++ R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGTEHYEVARGVQTVLQRYKELKDIIAILG 380


>gi|310644377|ref|YP_003949136.1| strongly ATP synthase subunit beta [Paenibacillus polymyxa SC2]
 gi|309249328|gb|ADO58895.1| Strongly ATP synthase subunit beta [Paenibacillus polymyxa SC2]
          Length = 466

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG PID    + +   +  I  + P         +  +TGI+VID+  P  
Sbjct: 88  ATLGRVFNVLGTPIDNGADMSEAARN-PIHRQAPSFEELTTQAEMLETGIKVIDLLAPYA 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +     +   +   IS+   VGER RE  +   +      + 
Sbjct: 147 KGGKVGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMRDSGVIN 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDVLLFIDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R ++E G YP VDPLAS SR L+      +   +   +  ++ R+ E +DI  I 
Sbjct: 325 TTNLERKISEMGIYPAVDPLASSSRILSPDVVGEEHYNVAQGVKQILARYNELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|89074728|ref|ZP_01161186.1| ATP synthase subunit B [Photobacterium sp. SKA34]
 gi|89049492|gb|EAR55053.1| ATP synthase subunit B [Photobacterium sp. SKA34]
          Length = 468

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 16/333 (4%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +  G  V + GR   +       GR++N LG+PID    +G+ +    I  + P
Sbjct: 58  MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQE-RYAIHREAP 116

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
              ++  V +  +TG++VID+  P   G +IG+F G+G+GK+  +     +       +S
Sbjct: 117 SYEDQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLS 176

Query: 194 L---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   VGER RE  +F  +     +         K  +V    +E P  R    LT +T+A
Sbjct: 177 VFAGVGERTREGNDFYYEMQEAGVVNIENPEESKVAMVYGQMNEPPGNRLRVALTGLTMA 236

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  
Sbjct: 237 ERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D
Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                 E   +   +  L+ R++E +DI  I G
Sbjct: 355 PLVVGQEHYDIARGVQSLLQRYKELKDIIAILG 387


>gi|255263993|ref|ZP_05343335.1| ATP synthase F1, beta subunit [Thalassiobium sp. R2A62]
 gi|255106328|gb|EET49002.1| ATP synthase F1, beta subunit [Thalassiobium sp. R2A62]
          Length = 477

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D + +  K D    I +  P    +       +TGI+VID+  P  
Sbjct: 87  ATLGRILNVVGEPVD-EGAPVKADEHRSIHADAPEFAEQSTESVVLETGIKVIDLLAPYA 145

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE   
Sbjct: 146 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESGV 203

Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
            + DNL   K  +V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 204 IVPDNLVDSKVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+V +V V  D+  DP  
Sbjct: 264 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKSGSITSVQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFE 384
            +  + LD   VLNR+++E+G YP VDPL S SRL D +   A+  ++   +  ++ R++
Sbjct: 322 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLMDPSIVGAEHYQVARDVQGILQRYK 381

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 382 SLQDIIAILG 391


>gi|332375360|gb|AEE62821.1| unknown [Dendroctonus ponderosae]
          Length = 515

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +    L+  I ++ P  ++    ++   TGI+V+
Sbjct: 120 IRIPVGVETLGRIMNVIGEPIDERGPIPTDKLAA-IHAEAPEFVDMSVEQEILVTGIKVV 178

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 179 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 237

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 238 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 297

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 298 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 355

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   +   +  +
Sbjct: 356 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNIARGVQKI 415

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 416 LQDYKSLQDIIAILG 430


>gi|167564618|ref|ZP_02357534.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis EO147]
 gi|167571760|ref|ZP_02364634.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis C6786]
          Length = 459

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + + +  I  K P         +  +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377


>gi|315635259|ref|ZP_07890536.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC
           33393]
 gi|315476005|gb|EFU66760.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC
           33393]
          Length = 457

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGDPIDEQGPIGEEE-RWSIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|311898389|dbj|BAJ30797.1| putative ATP synthase subunit beta [Kitasatospora setae KM-6054]
          Length = 484

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 154/270 (57%), Gaps = 9/270 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           G+V NALG+ ++ D +  +  + ++  I  K P     +   + F+TGI+VID+ TP   
Sbjct: 103 GKVFNALGEVLNVDKAEFESQVQVKWPIHRKAPNFSELESKTEMFETGIKVIDLLTPYVT 162

Query: 161 GQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+   ++  ++ F  V + + VGER RE  + I++ +    L K
Sbjct: 163 GGKIGLFGGAGVGKTVLIQEMIYRVAENFGGVSVFAGVGERTREGNDLIDEMVDSGVLDK 222

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 223 TALVFGQMDEPPGTRLRVALSALTMAEYFRDVEKQDVLLFIDNIFRFTQAGSEVSTLLGR 282

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD  
Sbjct: 283 MPSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDAT 340

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
            VL+R ++E+G YP VDPL S SR+ D  +
Sbjct: 341 TVLSRPISEKGIYPAVDPLDSTSRILDPRY 370


>gi|255020241|ref|ZP_05292310.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756]
 gi|254970383|gb|EET27876.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756]
          Length = 469

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 155/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG P+DG   + + D    I    P         +  +TG++VID+  P   G 
Sbjct: 92  GRIMNVLGDPVDGKGEV-QCDQRTPIHRAAPAFDELAASTEILETGVKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+ L+    R+   +     + + +GER RE  +F  +      L K  
Sbjct: 151 KVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGIGERTREGNDFYHEMTESKVLDKVA 210

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +     +E P  R    LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G +P 
Sbjct: 211 LCYGQMNEPPGNRLRVGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPS 270

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 271 AVGYQPTLAEEMGKLQERI--TSTKVGSITSVQAVYVPADDITDPSPATTFAHLDATVVL 328

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +AE G YP +DPL S SR  D      E   V+ +    + R++E +DI  I G
Sbjct: 329 SRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARACQKTLQRYKELQDIIAILG 385


>gi|302669540|ref|YP_003829500.1| ATP synthase F1 beta subunit AtpD1 [Butyrivibrio proteoclasticus
           B316]
 gi|302394013|gb|ADL32918.1| ATP synthase F1 beta subunit AtpD1 [Butyrivibrio proteoclasticus
           B316]
          Length = 464

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 171/334 (51%), Gaps = 17/334 (5%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GR+ N LG P+D     G  +    I    P   ++    + F+TGI+V+D+ 
Sbjct: 82  PVGDECLGRIFNLLGDPVDNGPDPGAKE-RWPIHRPAPAYEDQVPATEIFETGIKVVDLI 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +    
Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGISVFTGVGERTREGNDLYGEMKES 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             L K+ +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++
Sbjct: 201 GVLDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFT 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A +G YP VDPL S SR L+      +  ++   +  ++ R+ E +DI
Sbjct: 319 HLDATTVLSRDIASKGIYPAVDPLDSTSRILSPDIVGKEHYEVAKGVQQVLQRYRELQDI 378

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
             I     G+D + ++    V++   + +FL QS
Sbjct: 379 IAI----MGMDELSEEDKLTVYRARKVQNFLSQS 408


>gi|257785096|ref|YP_003180313.1| ATP synthase F1, beta subunit [Atopobium parvulum DSM 20469]
 gi|257473603|gb|ACV51722.1| ATP synthase F1, beta subunit [Atopobium parvulum DSM 20469]
          Length = 493

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 167/327 (51%), Gaps = 17/327 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N +G+P+DG +     D+    +    P       E   F+TGI+ ID+  P   G
Sbjct: 111 GRVWNVMGQPVDGGEI--PEDVEYYPIHHPAPLFEELTTETEIFETGIKAIDLLEPYVRG 168

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            + G+F G+G+GK+ L+     +         + + VGER RE  + F+E      + K+
Sbjct: 169 GKTGLFGGAGVGKTVLIQELINNLAQQHGGTSVFTGVGERTREGTDLFLEMTESGVINKT 228

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G +P
Sbjct: 229 CLVYGQMNEPPGARMRVALAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGRMP 288

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 289 SAVGYQPTLATEMGELQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 346

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R++ E G YP VDPLAS S   D +   +E  ++  ++   +  + + +DI  I    
Sbjct: 347 LSRAITELGIYPAVDPLASSSSALDPSIVGEEHYRVAMAVQETLQEYSDLQDIIAI---- 402

Query: 397 PGVDLILD---KAVHQVPIIYDFLKQS 420
            G+D + +   + V +   I  FL QS
Sbjct: 403 LGMDELSEEQQRTVARARKIQQFLSQS 429


>gi|88607774|ref|YP_505093.1| F0F1 ATP synthase subunit beta [Anaplasma phagocytophilum HZ]
 gi|118573505|sp|Q2GKK8|ATPB_ANAPZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|88598837|gb|ABD44307.1| ATP synthase F1, beta subunit [Anaplasma phagocytophilum HZ]
          Length = 479

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 178/342 (52%), Gaps = 20/342 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S GD   + G    +       GRV + LG+PIDG   +G  D+   
Sbjct: 60  VVRCVAMGSTDGLSRGDKFINTGSPISVPVGRKTLGRVFDVLGEPIDGVGDVG-ADVEYH 118

Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182
            +    P ++ Q+V  +   TGI+VID+  P   G ++G+F G+G+GK+     L+S  A
Sbjct: 119 SIHAHAPKLSEQKVATEVLVTGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNIA 178

Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234
           R+     V    VGER RE     RE +E  +   D  +KS  V+V    +E P  R   
Sbjct: 179 RAHKGFSVFAG-VGERTREGNDLYREMVESGVINEDEREKSQAVLVYGQMNEPPGARMRV 237

Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            L+A+T+AEYF  ++G +VL  +D++ RF  S  E++   G +P A GY  ++ SE+  +
Sbjct: 238 ALSALTMAEYFRDAEGQDVLFFVDNVFRFTQSGSEVSALLGRVPSAVGYQPTLASEMGAM 297

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V ++ V  D+  DP   +    LD   VL+R ++E G YP VDP
Sbjct: 298 QERI--TSTHKGSITSVQAIYVPADDLTDPAPSTSFLHLDSTTVLSRQISELGIYPAVDP 355

Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L S S+ L+     A+  ++   +  ++  ++  +DI  I G
Sbjct: 356 LDSTSQALSVDVVGAEHYEVAREVQRILQTYKSLQDIIAILG 397


>gi|226487056|emb|CAX75393.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Schistosoma japonicum]
          Length = 517

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 166/307 (54%), Gaps = 28/307 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PID      +G +  ++MS +    P  ++    ++  +TGI+V+D+  P 
Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206
             G +IG+F G+G+GK+ L+    +  AR+     V    VGER RE  +         +
Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            D  G+N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++  SG +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 304 GSEVSALSGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +  + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+     I   +E
Sbjct: 362 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSVARGVQKI--LQE 419

Query: 386 TRDIRLI 392
            R ++ I
Sbjct: 420 NRSLQDI 426


>gi|254581048|ref|XP_002496509.1| ZYRO0D01760p [Zygosaccharomyces rouxii]
 gi|238939401|emb|CAR27576.1| ZYRO0D01760p [Zygosaccharomyces rouxii]
          Length = 505

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 182/353 (51%), Gaps = 30/353 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +    +   I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 119 LGRIINVIGEPIDEAGPINT-TVRRPIHAEAPSFVEQSTNSEVLETGIKVVDLLAPYARG 177

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE +E    D 
Sbjct: 178 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMMETGVIDL 236

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            G++  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 237 KGES--KVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 294

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  ++K  G++T+V +V V  D+  DP   + 
Sbjct: 295 VSALLGRIPSAVGYQPTLSTDMGALQERIATTQK--GSVTSVQAVYVPADDLTDPAPATT 352

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +   +E     S++   +  ++  +
Sbjct: 353 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGEEHYNTASNVQMTLQAYKSLQ 412

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           DI  I     G+D + ++    V +   I  FL Q     ++  VF  I  KL
Sbjct: 413 DIIAI----LGMDELSEQDKLTVERARKIQRFLSQP---FATAQVFTGIEGKL 458


>gi|296128926|ref|YP_003636176.1| ATP synthase F1, beta subunit [Cellulomonas flavigena DSM 20109]
 gi|296020741|gb|ADG73977.1| ATP synthase F1, beta subunit [Cellulomonas flavigena DSM 20109]
          Length = 493

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 164/304 (53%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G+V N  G+ ++    L +G+   E+     + + PPA ++ +   + F+TGI+VID+ T
Sbjct: 110 GKVFNVTGEVLN----LAEGE-KFEVTERWPIHRKPPAFDQLESKTQMFETGIKVIDLLT 164

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I E     
Sbjct: 165 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIVEMEEAG 224

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 225 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVST 284

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 285 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 342

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPLAS SR+ D  +   E   + + +  ++ R +E +DI 
Sbjct: 343 LDATTELSREIASRGLYPAVDPLASTSRILDPRYVGQEHYDVATQVKSILQRNKELQDII 402

Query: 391 LIGG 394
            I G
Sbjct: 403 AILG 406


>gi|225027468|ref|ZP_03716660.1| hypothetical protein EUBHAL_01724 [Eubacterium hallii DSM 3353]
 gi|224955203|gb|EEG36412.1| hypothetical protein EUBHAL_01724 [Eubacterium hallii DSM 3353]
          Length = 465

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG+ ID  + +   D    ++ + PP    Q    +  +TGI+VID+  P   G
Sbjct: 86  GRLFNVLGETIDDGEPIK--DAPKMVIHREPPTFEEQNPAVEILETGIKVIDLLAPYAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216
            +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   + +G++  L K
Sbjct: 144 GKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVLAK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF   K  +VLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEKKQDVLLFIDNIFRFTQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E  ++   +   + +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESSSRILEADIVGEEHYEVARKVQEALQKYKELQDIIAILG 380


>gi|6625703|gb|AAF19362.1|AF188265_8 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 460

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +D+  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDVIAILG 379


>gi|77166520|ref|YP_345045.1| F0F1 ATP synthase subunit beta [Nitrosococcus oceani ATCC 19707]
 gi|254435893|ref|ZP_05049400.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27]
 gi|118573708|sp|Q3J6N1|ATPB_NITOC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|76884834|gb|ABA59515.1| ATP synthase F1 subcomplex beta subunit [Nitrosococcus oceani ATCC
           19707]
 gi|207089004|gb|EDZ66276.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27]
          Length = 458

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D    +G+ +    I  K P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGEPVDEAGPVGEEE-RWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +      L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR  D      E   V+ ++   + R++E +DI  I G
Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYQVARAVQGNLQRYKELKDIIAILG 377


>gi|298245831|ref|ZP_06969637.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963]
 gi|297553312|gb|EFH87177.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963]
          Length = 481

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 21/305 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ--RVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+ +D  + +   D     + +  P +  Q   +E  F+TG++VID+  P  
Sbjct: 101 LGRIFNVLGQAVDNKEEVE--DAPRYPIHRHAPTLEDQVSNIEI-FETGLKVIDLICPFM 157

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG F G+G+GK+     L++  A+      V    VGER RE      E IE  + 
Sbjct: 158 KGGKIGTFGGAGVGKTVTIQELINNIAKGHGGYSVFAG-VGERTREGNDLYHEMIEAGVI 216

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D L    +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 217 DRL---AMVFGQMNEPPGSRLRVALTGLTMAEYFRDEEGKDVLLFIDNIFRFTQAGAEVS 273

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D++ DP   +  +
Sbjct: 274 ALLGRMPSAVGYQPTLAEEMGELQERI--TSTKKGSITSMQAVYVPADDYTDPAPATTFA 331

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  IVL RS+AE+  +P VDPL+S SR+ D     +E   V+  +  ++ R++E +DI
Sbjct: 332 HLDSTIVLERSIAEKAIFPAVDPLSSTSRILDPQIVGNEHYDVARGVQKVLQRYKELQDI 391

Query: 390 RLIGG 394
             I G
Sbjct: 392 IAILG 396


>gi|218887916|ref|YP_002437237.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226740189|sp|B8DRD2|ATPB_DESVM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218758870|gb|ACL09769.1| ATP synthase F1, beta subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 471

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 9/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + K D  + I    P    +    +  +TGI+V+D+  P  
Sbjct: 89  ASLGRIMNVVGRPVDEMGPI-KTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFP 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ +L     +       IS+   VGER RE  +   +      L+
Sbjct: 148 KGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLE 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ ++    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++   G
Sbjct: 208 KAALIYGQMNEPPGARARVALTALACAEYFRDIENQDVLLFVDNIFRFTQAGSEVSALLG 267

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S LDG
Sbjct: 268 RMPSAVGYQPTLGTDLGGLQERI--TSTVKGSITSVQAVYVPADDLTDPAPATTFSHLDG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP VDPL S SR+ D      E   V+ ++  ++ ++++ +DI  I 
Sbjct: 326 TLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGPEHYSVARAVQQVLQKYKDLQDIIAIL 385

Query: 394 G 394
           G
Sbjct: 386 G 386


>gi|167838424|ref|ZP_02465283.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43]
          Length = 459

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   +    I  K P         +  +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGRPIDEAGPI-VSEHKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   +   +   + R++E RDI  I G
Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377


>gi|90581151|ref|ZP_01236950.1| ATP synthase subunit B [Vibrio angustum S14]
 gi|90437672|gb|EAS62864.1| ATP synthase subunit B [Vibrio angustum S14]
          Length = 468

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 16/333 (4%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +  G  V + GR   +       GR++N LG+PID    +G+ +    I  + P
Sbjct: 58  MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQE-RYAIHREAP 116

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
              ++  V +  +TG++VID+  P   G +IG+F G+G+GK+  +     +       +S
Sbjct: 117 SYEDQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLS 176

Query: 194 L---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   VGER RE  +F  +     +         K  +V    +E P  R    LT +T+A
Sbjct: 177 VFAGVGERTREGNDFYYEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMA 236

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  
Sbjct: 237 ERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D
Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                 E   +   +  L+ R++E +DI  I G
Sbjct: 355 PLVVGQEHYDIARGVQSLLQRYKELKDIIAILG 387


>gi|37522139|ref|NP_925516.1| F0F1 ATP synthase subunit beta [Gloeobacter violaceus PCC 7421]
 gi|81709449|sp|Q7NHG7|ATPB_GLOVI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|35213139|dbj|BAC90511.1| ATP synthase beta subunit [Gloeobacter violaceus PCC 7421]
          Length = 478

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 15/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID    LG  ++     I    P   +     + F+TGI+VID+  P
Sbjct: 94  STLGRIFNVLGEPID---ELGPVEIVDKFSIHRSAPKFTDLVTQPEIFETGIKVIDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  +   ++   N 
Sbjct: 151 YRKGGKIGLFGGAGVGKTVLIQELIHNIAKEHSGVSVFGGVGERTREGNDLYNEFKESNV 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIREIAT 271
           L +  +V    +E P  R    LTA+T+AEYF   SK D VLL +D+I RF  +  E++ 
Sbjct: 211 LGQVALVYGQMNEPPGARMRVGLTALTMAEYFRDVSKQD-VLLFIDNIFRFVQAGSEVSA 269

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +   +G+IT+V +V V  D+  DP   +  + 
Sbjct: 270 LLGRMPSAVGYQPTLGTEMGDLQERI--TSTNEGSITSVQAVYVPADDLTDPAPATTFAH 327

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R LA  G YP VDPL+S S +   A   +E   +   +   + R+++ +DI 
Sbjct: 328 LDATTVLSRQLASLGIYPAVDPLSSTSTMLQPAVVGEEHYNIARGVQSTLQRYKDLQDII 387

Query: 391 LIGG 394
            I G
Sbjct: 388 AILG 391


>gi|332291570|ref|YP_004430179.1| ATP synthase F1, beta subunit [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169656|gb|AEE18911.1| ATP synthase F1, beta subunit [Krokinobacter diaphorus 4H-3-7-5]
          Length = 502

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG D+L K GD  + I    P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGMDNLPKAGDAGLSIHRSAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
                            D +G    K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEEGGWDLSKVDKIGMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             ++       +  L+ R++E +DI  I G
Sbjct: 388 LGSEHYNTAQRVKELLQRYKELQDIIAILG 417


>gi|296160921|ref|ZP_06843733.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1]
 gi|295888810|gb|EFG68616.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1]
          Length = 496

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 12/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  G   D   +L        I    PP  + +     F TGI+V+D+  PL  G 
Sbjct: 102 GRLLDVTGATRDDGPALPAQIERRPIHRAAPPLASLKGTSTLFSTGIKVLDLLAPLAQGG 161

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           +  +F G+G+GK+ L+     +M  R +     + + VGER RE  E + D      L +
Sbjct: 162 KAAMFGGAGVGKTVLVMELIHAMVERYEGIS--VFAGVGERSREGHEMLLDMRTSGVLPR 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R   P TA+TIAEYF   +  NVLL++D++ RF  +  E++   G 
Sbjct: 220 TVLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGR 279

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ +E+  L ERI        ++TA+ +V V  D+  DP   ++ + LD  
Sbjct: 280 MPSRVGYQPTLATEVAGLQERI--VSVGGVSVTAIEAVYVPADDFTDPAVTAIAAHLDSM 337

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
           +VL+RS+A EG YP VDP+AS S L D     +E   V++ +  +I  + E +D+
Sbjct: 338 VVLSRSMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRIIEHYRELQDV 392


>gi|269219864|ref|ZP_06163718.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210769|gb|EEZ77109.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 484

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 162/297 (54%), Gaps = 15/297 (5%)

Query: 103 GRVINALGK--PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLC 159
           G V N  G+   +DGD+ L + +    I  K PPA +    E + F+TGI+VID+ TP  
Sbjct: 102 GHVFNVFGECLNLDGDEVL-QVEERWPIHRK-PPAFDELEPETRMFQTGIKVIDLLTPYV 159

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214
            G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I + +G+   L
Sbjct: 160 QGGKIGLFGGAGVGKTVLIQEMIQRVAQDHDGVSVFAGVGERTREGNDLINE-MGEAGVL 218

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  
Sbjct: 219 DKTALVFGQMDEPPGVRLRVALSGLTMAEYFRDVENQDVLLFIDNIFRFTQAGSEVSTLL 278

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD
Sbjct: 279 GRMPSAVGYQPTLADEMGSLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAHLD 336

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
               L+R +A  G YP VDPL S SR+ D      E  ++ + +  ++ + +E +DI
Sbjct: 337 ATTQLSREIASRGLYPAVDPLTSTSRILDPQVVGQEHYEVATRVKAILQKNKELQDI 393


>gi|45593084|gb|AAS68128.1| ATP synthase beta subunit [Bifidobacterium animalis subsp. lactis
           DSM 10140]
          Length = 495

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 142 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 201

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 202 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 261

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 262 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 319

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D  + 
Sbjct: 320 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 379

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 380 GQAHYDCANRVKAILQRNKELQDIIALIG 408


>gi|329939839|ref|ZP_08289140.1| ATP synthase subunit beta [Streptomyces griseoaurantiacus M045]
 gi|329301409|gb|EGG45304.1| ATP synthase subunit beta [Streptomyces griseoaurantiacus M045]
          Length = 478

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 177/327 (54%), Gaps = 17/327 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D+S  +G+    I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNVDESY-EGE-RWSIHRKAPNFDALESKTEMFETGVKVIDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+      + K+ 
Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMAESGVIDKTA 218

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 279 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 336

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + +AD       +  ++ ++++ +DI  I    
Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYNTAMRVKTVLQKYKDLQDIIAI---- 392

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 393 LGIDELGEEDKLTVHRARRVERFLSQN 419


>gi|225848289|ref|YP_002728452.1| F0F1 ATP synthase subunit beta [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643296|gb|ACN98346.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 474

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+PID    +   +    I  + P    +    + F+TGI+VID+  PL  G
Sbjct: 94  LGRIFNVVGQPIDEAGPV-NAEEYWPIFREAPSFEEQSTKVEQFETGIKVIDLLVPLIKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
            ++G+F G+G+GK+ L+       A+      V++  VGER RE  + ++E      L  
Sbjct: 153 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 211

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P +R     T +TIAEYF   +  +VL+ +D+I RF  +  E++T  G 
Sbjct: 212 TAMVYGQMNEPPGVRFRVAHTGLTIAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGR 271

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP A GY  ++ +++  + ERI  ++   G+IT++ +V V  D+  DP   S+ + LD  
Sbjct: 272 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 329

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394
           IVL R L E G YP +DPL S SR     +  +E   V+  T  ++ R++E ++I  I G
Sbjct: 330 IVLQRRLTELGIYPAIDPLESTSRALAPEYVGEEHYYVARETQRILQRYKELQEIIAILG 389


>gi|119350479|gb|ABL63190.1| AtpB [Chlorococcum ellipsoideum]
          Length = 392

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + +G+ ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 38  LGRIFNVLGEPVDNLGPVKQGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 96

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 97  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 157 NLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFVQAGAEV 216

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 217 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 274

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK  V+  S+   + R++E +
Sbjct: 275 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYVTAQSVKKTLQRYKELQ 333

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 334 DIIAILG 340


>gi|224283631|ref|ZP_03646953.1| F0F1 ATP synthase subunit beta [Bifidobacterium bifidum NCIMB
           41171]
 gi|310288108|ref|YP_003939367.1| ATP synthase beta chain [Bifidobacterium bifidum S17]
 gi|311064981|ref|YP_003971707.1| ATP synthase subunit beta [Bifidobacterium bifidum PRL2010]
 gi|313140782|ref|ZP_07802975.1| ATP synthase subunit beta [Bifidobacterium bifidum NCIMB 41171]
 gi|309252045|gb|ADO53793.1| ATP synthase beta chain [Bifidobacterium bifidum S17]
 gi|310867301|gb|ADP36670.1| AtpD ATP synthase beta chain [Bifidobacterium bifidum PRL2010]
 gi|313133292|gb|EFR50909.1| ATP synthase subunit beta [Bifidobacterium bifidum NCIMB 41171]
          Length = 494

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 155/274 (56%), Gaps = 12/274 (4%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 137 IHRKPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 196

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   +S+   VGER RE  + I + +G+   L+K+ +V    DE P  R   PLTA+T+A
Sbjct: 197 NHGGVSVFAGVGERTREGNDLIGE-MGEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  + 
Sbjct: 256 EYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
               +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ 
Sbjct: 314 TRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRIL 373

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
           D  +         + +  ++ R +E +D I LIG
Sbjct: 374 DPRYVGQAHYDCANRVKAILQRNKELQDIIALIG 407


>gi|256575374|gb|ACU87654.1| AtpD [Gallibacterium anatis]
 gi|256575378|gb|ACU87655.1| AtpD [Gallibacterium anatis]
 gi|256575380|gb|ACU87656.1| AtpD [Gallibacterium anatis]
 gi|270357554|gb|ACZ81009.1| AtpB [Gallibacterium anatis]
          Length = 452

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+      I    P    +    +  +TGI+VID+  P   G 
Sbjct: 83  GRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKGG 141

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  
Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKVS 201

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|186684534|ref|YP_001867730.1| F0F1 ATP synthase subunit beta [Nostoc punctiforme PCC 73102]
 gi|226740655|sp|B2IUL2|ATPB_NOSP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|186466986|gb|ACC82787.1| ATP synthase F1, beta subunit [Nostoc punctiforme PCC 73102]
          Length = 482

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + S+ I    P   + +     F+TGI+V+D+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDNRGPV-NAEASLPIHRSAPKFTDLETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  +  
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +NL +S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 NENLNESKIALVYGQMNEPPGARMRVGLSGLTVAEYFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +       DE      ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|251793675|ref|YP_003008405.1| ATP synthase F1 subunit beta [Aggregatibacter aphrophilus NJ8700]
 gi|247535072|gb|ACS98318.1| ATP synthase F1, beta subunit [Aggregatibacter aphrophilus NJ8700]
          Length = 457

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDERGPIG-AEEEWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|18033075|gb|AAL56979.1|AF326331_1 ATP synthase [Pasteurella canis]
          Length = 431

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHG 161
           GR++N LG+PID    +G  +     + + PP+   Q    +  +TGI+VID+  P   G
Sbjct: 72  GRIMNVLGEPIDEQGPIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAKG 129

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 130 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 189

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
             V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 190 SPVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 249

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 250 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 307

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 308 LSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 365


>gi|167768302|ref|ZP_02440355.1| hypothetical protein CLOSS21_02858 [Clostridium sp. SS2/1]
 gi|317497767|ref|ZP_07956080.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709826|gb|EDS20405.1| hypothetical protein CLOSS21_02858 [Clostridium sp. SS2/1]
 gi|291560278|emb|CBL39078.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing
           bacterium SSC/2]
 gi|316894956|gb|EFV17125.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 462

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 163/310 (52%), Gaps = 9/310 (2%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N LG+ ID  + + + +    I  + P   ++  V + F+TGI+
Sbjct: 74  GPIKVPVGKQTLGRMFNVLGEAIDKGEPV-ESEEKWAIHREPPKFEDQSPVVEMFETGIK 132

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207
           VID+  P   G +IG+F G+G+GK+ L+     +   +     I + VGER RE  +   
Sbjct: 133 VIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWN 192

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +      +K + +V    +E P  R     T +T+AEYF   +  NVLL +D+I R+  +
Sbjct: 193 EMTESGVIKNTALVFGQMNEPPGSRMRVAQTGLTMAEYFRDQEKQNVLLFIDNIFRYVQA 252

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP  
Sbjct: 253 GSEVSALLGRMPSAVGYQPTLANEVGALQERI--TSTKNGSITSVQAVYVPADDLTDPAP 310

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+++E+G YP VDPL S SR+ +     +E  ++   +   + R++
Sbjct: 311 ATTFAHLDATTVLSRAISEQGIYPAVDPLESSSRILEPDIVGEEHYEVARRVEEALQRYK 370

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 371 ELQDIIAILG 380


>gi|258593696|emb|CBE70037.1| ATP synthase subunit beta, membrane-bound, F1 sector [NC10
           bacterium 'Dutch sediment']
          Length = 473

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 164/302 (54%), Gaps = 11/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N +G+P+D    +   +     + +  PA + Q  + +  +TGI+VID+  P 
Sbjct: 91  AALGRIMNVIGEPVDKQGPIDAKN--HYPIHRPAPAFDEQATKVEILETGIKVIDLLEPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G + G+F G+G+GK+ ++    R+   +   +S+   VGER RE  + ++E      +
Sbjct: 149 TKGGKTGLFGGAGVGKTVVIMELIRNIAMEHGGLSVFAGVGERTREGNDLWLEMKESGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           +K+ ++     E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   
Sbjct: 209 EKTALIYGQMTEPPGSRLRVALTGLTVAEYFRDEEKQDVLLFVDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLGTEMGELQERI--TSTKTGSITSVQAIYVPADDITDPAPAAAFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
              VL+R L E G YP VDPLAS SR+ D     +E   V+ S+  ++ R+++ +DI  I
Sbjct: 327 ATTVLSRQLTELGIYPAVDPLASTSRILDPRVVGEEHYAVARSIQKILQRYKDLQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|237809867|ref|YP_002894307.1| F0F1 ATP synthase subunit beta [Tolumonas auensis DSM 9187]
 gi|259585455|sp|C4LDW0|ATPB_TOLAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|237502128|gb|ACQ94721.1| ATP synthase F1, beta subunit [Tolumonas auensis DSM 9187]
          Length = 462

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    +G  D +  I  + P   ++    +  +TGI+VID+  P   G 
Sbjct: 88  GRIMNVLGEPVDEQGPIGAED-NWVIHREAPSYEDQSSATELLETGIKVIDLICPFAKGG 146

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K 
Sbjct: 147 KVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKESNVLDKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 206 AMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 265

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  + 
Sbjct: 266 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVT 323

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E  +    +  ++ R++E +DI  I G
Sbjct: 324 LSRQIAALGIYPAVDPLDSTSRQLDPLVVGQEHYETARGVQTVLQRYKELKDIIAILG 381


>gi|34536479|dbj|BAC87673.1| beta subunit of ATP synthase [Chlamydomonas chlorococcoides]
          Length = 376

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 161/313 (51%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + S+ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEASLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  S+ SE+ +L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPSLSSEMGQLQERI--TSTKDGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   S+  +   + 
Sbjct: 262 APSVTFAHLDATTVLSRGLASKGIYPAVDPLESTSTML-QPWIVGEKHYESAQNVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 321 RYKELQDIIAILG 333


>gi|171920630|ref|ZP_02931872.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185178799|ref|ZP_02964594.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024161|ref|ZP_02996887.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518551|ref|ZP_03004012.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524101|ref|ZP_03004181.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867714|ref|ZP_03079715.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273365|ref|ZP_03205901.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209554411|ref|YP_002284551.1| F0F1 ATP synthase subunit beta [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225550610|ref|ZP_03771559.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225551120|ref|ZP_03772066.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|226740688|sp|B5ZAW1|ATPB_UREU1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|171903354|gb|EDT49643.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209422|gb|EDU06465.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018792|gb|EDU56832.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188997947|gb|EDU67044.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195660096|gb|EDX53476.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660569|gb|EDX53825.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249885|gb|EDY74665.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209541912|gb|ACI60141.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225378935|gb|EEH01300.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|225379764|gb|EEH02126.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 464

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N  G PID   +  GK    M I    P    +    +  +TGI+V+D+  P   
Sbjct: 88  LGRMFNVTGDPIDEQPAPTGK---RMPIHRPAPSFAEQAEAIEILETGIKVVDLLVPFAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E    D L K
Sbjct: 145 GGKIGLFGGAGVGKTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMAESDVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AE F    G +VLL +D+I RF  +  E++   G 
Sbjct: 205 TALVFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD  
Sbjct: 265 MPSAVGYQPTLAFEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R++A  G YP + PL S SRL D          +   +  ++ RF E +DI  I G
Sbjct: 323 VVLDRAIASLGLYPAISPLQSTSRLLDPLVVGVKHYSVARRVIEILQRFMELQDIIAILG 382


>gi|320409255|gb|ADW27219.1| ATP synthase beta subunit [Tubulanus polymorphus]
          Length = 363

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 153/285 (53%), Gaps = 16/285 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +G    S  I ++ P  ++    ++  +TGI+V+D+  P   G
Sbjct: 31  LGRIMNVIGEPIDERGPIG-AKTSAAIHAEAPEFVDMSVEQEILETGIKVVDMLAPYAKG 89

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 148

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 149 KDKSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 208

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 209 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 266

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           + LD   VL+R +AE G YP VDPL S SR+ D     +E   ++
Sbjct: 267 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGEEHYTIA 311


>gi|320407255|gb|ADW27403.1| ATP synthase beta subunit [Owenia fusiformis]
          Length = 369

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G PID    + + +    I ++ P  +     ++   TGI+VI
Sbjct: 54  IRIPVGPETLGRIMNVIGDPIDERGPI-ESNAFASIHAEAPEFVEMSLEQEILLTGIKVI 112

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 113 DMLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 171

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 172 MIEGGVISLKDKTSKVSLVYGQMNEPPAXRARVALTGLTVAEYFRDVEGQDVLLFIDNIF 231

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 232 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TSTKKGSITSVQAIYVPADDL 289

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD + VL+R +AE G YP VDPL S SR+ D     A+  ++   +  +
Sbjct: 290 TDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGAEHYEIARGVQKI 349

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 350 LQNYKSLQDIIAILG 364


>gi|271502665|ref|YP_003335691.1| ATP synthase F1 subunit beta [Dickeya dadantii Ech586]
 gi|270346220|gb|ACZ78985.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech586]
          Length = 460

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P   +    ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEDLSNSQELLETGIKVIDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|27904521|ref|NP_777647.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|32171341|sp|Q89B39|ATPB_BUCBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27903918|gb|AAO26752.1| ATP synthase beta chain [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 465

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 13/311 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGI 149
           ++       GR++N LG+PID    L   D S     EI  K P    +    +  +TGI
Sbjct: 77  KVPVGTATLGRIVNVLGQPIDMKGPLKNHDNSDIEYWEIHRKAPSYSEQLTSYEVLETGI 136

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFI 206
           +VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F 
Sbjct: 137 KVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFTGVGERTREGNDFY 196

Query: 207 EDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
            + + D+  L K  +V    +E P  R     T +TIAE F ++G +VLL +D+I R+  
Sbjct: 197 HE-MSDSRVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRNEGHDVLLFIDNIYRYTL 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++  E+  L ERI  +   KG+IT++ +V V  D+  DP 
Sbjct: 256 AGTEVSALLGRIPSAVGYQPTLSEEMGVLQERI--TSTNKGSITSIQAVYVPADDLTDPS 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             +  S LD  I L+R +   G YP +DPL S SR  D          V+  +  ++ R+
Sbjct: 314 PATTFSHLDSTITLSRQIVSLGIYPAIDPLNSTSRQLDPRIVGQLHYDVALGVRSILQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 QELKDIIAILG 384


>gi|262376922|ref|ZP_06070149.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145]
 gi|262308267|gb|EEY89403.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145]
          Length = 464

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 159/307 (51%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I    P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVAT-EARLPIHRSAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  S+ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|113972252|ref|YP_736045.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-4]
 gi|123029180|sp|Q0HD79|ATPB_SHESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113886936|gb|ABI40988.1| ATP synthase F1, beta subunit [Shewanella sp. MR-4]
          Length = 463

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 159/301 (52%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID   ++G+ +  + I    P   ++    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGEPIDEAGAIGEEERYV-IHRSAPSYEDQSNTTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|195442758|ref|XP_002069113.1| GK24170 [Drosophila willistoni]
 gi|194165198|gb|EDW80099.1| GK24170 [Drosophila willistoni]
          Length = 685

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 160/314 (50%), Gaps = 17/314 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR++N +G PIDG   + K D    I +  P   +    ++   TGI+VID
Sbjct: 192 RVPVGKAVLGRILNVVGDPIDGRGEV-KSDFYSFIHNDAPELEDLSVKQEMLVTGIKVID 250

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE      E 
Sbjct: 251 LLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHEM 309

Query: 206 IEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261
           IE     + D+  K  +V    +E P  R    LT +TIAEYF    G +VLL +D+I R
Sbjct: 310 IESKVISIDDDSSKVSLVFGQMNEPPGARSRIVLTGLTIAEYFRDIDGQDVLLFIDNIFR 369

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+  
Sbjct: 370 FTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDLT 427

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LI 380
           DP   +  S LD   VL+R +AE G YP VDPL SVSR+ D     +E   V+ L    +
Sbjct: 428 DPAPSATFSHLDATTVLSRQIAELGIYPSVDPLDSVSRILDPEIVGEEHYNVARLVQKTL 487

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 488 QSYKSLQDIIAILG 501


>gi|313884726|ref|ZP_07818482.1| ATP synthase F1, beta subunit [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620094|gb|EFR31527.1| ATP synthase F1, beta subunit [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 498

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 18/312 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSME-----IMSKVPPAMNRQRVEKGFKTG 148
           ++       GRV N LG  ID      KGDL  +     I    P   N     +  +TG
Sbjct: 91  KVPAGPATLGRVFNVLGHTIDD-----KGDLEADYELKSIYRDAPKYENLSSEYEILETG 145

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREF 205
           I+VID+  P   G +IG+F G+G+GK+ L+       +   D + + + VGER RE  + 
Sbjct: 146 IKVIDLLAPYLKGGKIGLFGGAGVGKTVLIQELIHNIAQELDGISVFTGVGERTREGNDL 205

Query: 206 IEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263
           + +     + KK+ +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF 
Sbjct: 206 VFEMRDSGVDKKTAMVFGQMNEPPGARMRTVLTGLTMAEYFRDKMKQDVLLFVDNIFRFT 265

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ SE+  + ERI  +  E G+IT++ +V V  D++ DP
Sbjct: 266 QAGSEVSALLGRMPSAVGYQPTLASEMGAMQERIAST--EDGSITSIQAVYVPADDYTDP 323

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHR 382
              +  + LD    L+R L E+G YP V+PL S S  L+++       ++   +   + R
Sbjct: 324 APATTFTHLDATTNLDRKLTEQGIYPAVNPLESTSVALSEEIVGPRHYRIARQVQTTLQR 383

Query: 383 FEETRDIRLIGG 394
           + E +DI  I G
Sbjct: 384 YHELQDIIAILG 395


>gi|213401038|gb|ACJ47167.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Nasonia
           vitripennis]
          Length = 309

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 20/288 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   G
Sbjct: 18  GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 76

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 77  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +  
Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
             S LD   VL+R +AE G YP VDPL S S+        +E   V+S
Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300


>gi|322492414|emb|CBZ27688.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 499

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 15/271 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    +G+  + M I ++ P   ++   +    TGI+VID+  P C G 
Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +   +    
Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K V+V    +E P  R     +A+T+AEYF   +G NVLL +D+I RF  +  E++ 
Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  +L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           LD   VL+R++AE G YP V+PL   SR+ D
Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMD 388


>gi|38906111|gb|AAR27808.1| ATP synthase beta chain [Bifidobacterium animalis subsp. lactis DSM
           10140]
          Length = 373

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|320449957|ref|YP_004202053.1| V-type ATP synthase subunit beta [Thermus scotoductus SA-01]
 gi|320150126|gb|ADW21504.1| V-type ATP synthase, beta chain [Thermus scotoductus SA-01]
          Length = 478

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 164/316 (51%), Gaps = 22/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +GKPIDG   +   +  + I+      + R++ E+  +TGI  ID
Sbjct: 81  RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPIVGLPLNPVARRKPEEFIQTGISTID 139

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200
           +   L  GQ++ +F+GSG+  + + +  AR                   V+ + +G   R
Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199

Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
           E+  FI+++     L +SV+ +  +D+  I R + P  A+T+AEY + + D +VL+IL  
Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +T +  ++REI  +  E+P  RGYP  ++++L  + ER G    +KG++T +  + +  D
Sbjct: 260 MTNYCEALREIGASREEIPGRRGYPGYMYTDLATIYERAGVVVGKKGSVTQIPILSMPDD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374
           +   PI D    I +G I L+R L  +G YPP+DPL S+SRL +    K  + ++ K VS
Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379

Query: 375 SLTHLIHRFEETRDIR 390
               L   +    DIR
Sbjct: 380 D--QLYSAYANGVDIR 393


>gi|238899337|ref|YP_002925020.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229467098|gb|ACQ68872.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 460

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG PID    +G+ +    I  + P        ++  +TGI+V+D+  P   G
Sbjct: 85  LGRIMNVLGDPIDMKGPIGEQE-RWSIHRQPPSYEELANSQELLETGIKVMDLICPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +      L K 
Sbjct: 144 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESGVLDKV 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 204 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 263

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 264 SAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATAV 321

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 322 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|82889056|gb|ABB92851.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
 gi|82889058|gb|ABB92852.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
 gi|82889060|gb|ABB92853.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
          Length = 310

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 20/288 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   G
Sbjct: 18  GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 76

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 77  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +  
Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
             S LD   VL+R +AE G YP VDPL S S+        +E   V+S
Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300


>gi|134102716|ref|YP_001108377.1| F0F1 ATP synthase subunit beta [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007827|ref|ZP_06565800.1| F0F1 ATP synthase subunit beta [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915339|emb|CAM05452.1| ATP synthase beta chain [Saccharopolyspora erythraea NRRL 2338]
          Length = 455

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +   G       I  K P     +   +  +TGI+VID+ TP   G 
Sbjct: 77  GHVFNALGHCLD-EPGYGSDAERWTIHRKAPSFDQLEGKTEMLETGIKVIDLLTPYVQGG 135

Query: 163 RIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+    R    +     + + VGER RE  + ++E      L  + 
Sbjct: 136 KIGLFGGAGVGKTVLIQEMIRRVAKNFGGTSVFAGVGERTREGNDLWVEMAESGVLADTA 195

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  + +E++T  G +P
Sbjct: 196 LVFGQMDEPPGTRMRVALSALTMAEYFRDVQQQDVLLFIDNIFRFTQAGQEVSTLLGRMP 255

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 256 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 313

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++++G YP VDPLAS S + D A   +E  ++   +  ++ +++E +DI  I G
Sbjct: 314 LSRPISQKGIYPAVDPLASSSTILDPAIVGEEHYRVAQEVKRILQKYKELQDIIAILG 371


>gi|114049501|ref|YP_740051.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-7]
 gi|123030131|sp|Q0HPG1|ATPB_SHESR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113890943|gb|ABI44994.1| ATP synthase F1, beta subunit [Shewanella sp. MR-7]
          Length = 463

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 159/301 (52%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID   ++G+ +  + I    P   ++    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGEPIDEAGAIGEEERYV-IHRSAPSYEDQSNTTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|284928846|ref|YP_003421368.1| ATP synthase F1 subcomplex subunit beta [cyanobacterium UCYN-A]
 gi|284809305|gb|ADB95010.1| ATP synthase F1 subcomplex beta subunit [cyanobacterium UCYN-A]
          Length = 482

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +G  + S  I    P   + +   + F+TGI+VID+ TP   G
Sbjct: 97  LGRIFNVLGEPVDQRGEVGNKEFS-PIHRPAPKLTDLETKPQVFETGIKVIDLLTPYRQG 155

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------GD 212
            +IG+F G+G+GK+ ++     +       +S+   VGER RE  +   + +       +
Sbjct: 156 GKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMMESGVINSE 215

Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL  S   +V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 216 NLNDSKIALVYGQMNEPPGARMRVALSALTMAEYFRDVNKQDVLLFVDNIFRFVQAGAEV 275

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 276 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 333

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LDG  VL+R+LA +G YP VDPL S S +        E      ++   + R++E +D
Sbjct: 334 AHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPNIVGQEHYDTARAVQSTLQRYKELQD 393

Query: 389 IRLIGG 394
           I  I G
Sbjct: 394 IIAILG 399


>gi|269794331|ref|YP_003313786.1| ATP synthase, F1 subunit beta [Sanguibacter keddieii DSM 10542]
 gi|269096516|gb|ACZ20952.1| ATP synthase, F1 beta subunit [Sanguibacter keddieii DSM 10542]
          Length = 493

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 153/273 (56%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSD 185
           + + PPA ++   +   F+TGI+VID+ TP   G +IG+F G+G+GK+ L+   ++  ++
Sbjct: 136 IHRKPPAFDQLESKTAMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIYRVAN 195

Query: 186 CFDKV-IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
             + V + + VGER RE  + IE+      +K++ +V    DE P  R    L+A+T+AE
Sbjct: 196 NHNGVSVFAGVGERTREGNDLIEEMTESGVIKQTALVFGQMDEPPGTRLRVALSALTMAE 255

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+ +L ERI  +  
Sbjct: 256 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TST 313

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D
Sbjct: 314 RGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLASSSRILD 373

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +         + +  ++ R +E +DI  I G
Sbjct: 374 PRYVGQAHYDTATRVKQILQRNKELQDIIAILG 406


>gi|115522308|ref|YP_779219.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisA53]
 gi|122297999|sp|Q07UZ5|ATPB_RHOP5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115516255|gb|ABJ04239.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisA53]
          Length = 476

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +    L   I ++ P   ++    +   TGI+V+D+  P   G 
Sbjct: 90  GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211
           +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +    G
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    L+ +T+AE+F  +G +VL  +D+I RF  +  E++ 
Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390
           LD   VLNR+++E+G YP VDPL S SR+       +E    + +   ++ +++  +DI 
Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQKYKSLQDII 386

Query: 391 LIGG 394
            I G
Sbjct: 387 AILG 390


>gi|91786238|ref|YP_547190.1| F0F1 ATP synthase subunit beta [Polaromonas sp. JS666]
 gi|123060395|sp|Q12GQ0|ATPB_POLSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91695463|gb|ABE42292.1| ATP synthase F1 subcomplex beta subunit [Polaromonas sp. JS666]
          Length = 467

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 170/340 (50%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  + +  G+ V++ G     P      GR+++ LG PID    + +  L+  
Sbjct: 51  IVRTIALGTSDGLRRGNTVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQ-TLTAP 109

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +         +NL +S V  V    +E P  R    
Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVA 228

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 346

Query: 356 SVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           S SR  D      D      ++   + R++E RDI  I G
Sbjct: 347 STSRQLDPNVVGEDHYATARAVQGTLQRYKELRDIIAILG 386


>gi|313625648|gb|EFR95323.1| ATP synthase F1, beta subunit [Listeria innocua FSL J1-023]
          Length = 456

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 199/406 (49%), Gaps = 24/406 (5%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     I  + IGE   L  G  V + G    +       G
Sbjct: 33  EYHTHQGTYLAEVVQHTGINT----ISAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG   L   ++   I  + P   +    ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPELA-AEVKWPIFREQPLLRDLDTSKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGRE-VREFIEDYLGDNLKKSVVV 220
            G+F G+G+GKS L+     +        + + VGER RE +  + E      L ++ VV
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMQGGNSVFTGVGERVREGIGLYKELEASGVLPQTTVV 207

Query: 221 VATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G++P+ 
Sbjct: 208 LGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKIPIT 267

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD  IVL 
Sbjct: 268 GGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDSTIVLE 325

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + G    
Sbjct: 326 RSIAALGIFPAVNPLQSFSRALNPTFVGERHYELAVQVKFILQRYMELQEIINVLGM--- 382

Query: 399 VDLILD--KAVHQVPIIYDFLKQ----SPSDLSSEDVFQEITKKLQ 438
            +L  D  K VH+   I +FL Q    S     +E  F EI   L+
Sbjct: 383 AELSEDDRKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEIEDLLE 428


>gi|118471849|ref|YP_889188.1| F0F1 ATP synthase subunit beta [Mycobacterium smegmatis str. MC2
           155]
 gi|190358683|sp|A0R200|ATPB_MYCS2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118173136|gb|ABK74032.1| ATP synthase F1, beta subunit [Mycobacterium smegmatis str. MC2
           155]
          Length = 475

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN--RQRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG  +D D   GK D     + + PPA +    R E   +TG++V+D+ TP   
Sbjct: 96  GHVFNALGDCLD-DPGYGK-DFEHWSIHRKPPAFSDLEPRTEM-LETGLKVVDLLTPYVR 152

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK 
Sbjct: 153 GGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKD 212

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AE+F   +G +VLL +D+I RF  +  E++T  G 
Sbjct: 213 TALVFGQMDEPPGTRMRVALSALTMAEFFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGR 272

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD  
Sbjct: 273 MPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDAT 330

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+R++  +G +P VDPLAS S + D A   DE  ++   +  ++ R+++ +DI  I G
Sbjct: 331 TELSRAVFSKGIFPAVDPLASSSTILDPAIVGDEHYRVAQEVIRILQRYKDLQDIIAILG 390


>gi|184186105|ref|NP_001116974.1| ATP synthase beta subunit [Strongylocentrotus purpuratus]
 gi|115966189|ref|XP_001177551.1| PREDICTED: similar to H(+)-transporting ATPase beta subunit
           [Strongylocentrotus purpuratus]
          Length = 523

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 148/272 (54%), Gaps = 16/272 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +G  D    I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 137 GRIINVIGEPIDERGPIGT-DKRSAIHAEAPAFVEMSVNQEILVTGIKVVDLLAPYAKGG 195

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L 
Sbjct: 196 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISLK 254

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 255 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 314

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 315 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 372

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 373 HLDATTVLSRGIAELGIYPAVDPLDSSSRIMD 404


>gi|294143106|ref|YP_003559084.1| ATP synthase F1 subunit beta [Shewanella violacea DSS12]
 gi|293329575|dbj|BAJ04306.1| ATP synthase F1, beta subunit [Shewanella violacea DSS12]
          Length = 458

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 10/302 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           +   GR++N LG+PID    +G  D  + I  + P   ++    +  +TGI+VID+  P 
Sbjct: 80  SVTLGRIMNVLGEPIDEAGPIGGTDHYV-IHREAPTFEDQSSSTELLETGIKVIDLICPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDAGV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFFVDNIYRYTLAGTEVSALL 257

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLD 315

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             IVL+R++A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I
Sbjct: 316 ATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAI 375

Query: 393 GG 394
            G
Sbjct: 376 LG 377


>gi|284520625|gb|ADB92921.1| ATP synthase beta chain [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 397

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 64  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 123

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 124 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 183

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 184 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 241

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D  + 
Sbjct: 242 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 301

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 302 GQAHYDCANRVKAILQRNKELQDIIALIG 330


>gi|326387627|ref|ZP_08209233.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207673|gb|EGD58484.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 478

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 152/293 (51%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  G   D    L        I    PP   +      F TGI+VID+ TPL  G 
Sbjct: 97  GRLLDVTGTVGDHGADLPGDTPRWPIHRAAPPLSAQTGTSDLFMTGIKVIDLLTPLAQGG 156

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +  +F G+G+GK+ L+   + A    +D + + + VGER RE  E + D  G   L ++V
Sbjct: 157 KAAMFGGAGVGKTVLVMELIHAMVAGYDGISVFAGVGERSREGHEMLLDMRGSGVLDRTV 216

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R   P++A+TIAE+F  +   NVLL++D++ RF  +  E++   G LP
Sbjct: 217 LVYGQMNEPPGARWRVPMSALTIAEWFRDEARRNVLLLMDNVFRFVQAGAEVSGLLGRLP 276

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ SE+  L ERI  +     ++TA+ +V V  D+  DP   ++ +  D  +V
Sbjct: 277 SRVGYQPTLASEVAALEERI--ASVGGASVTAIQAVYVPADDFTDPAVTTIAAHADSMVV 334

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           L+R++A EG YP VDP+AS S L D     +E    +  +   I  + E  D+
Sbjct: 335 LSRAMAAEGIYPAVDPIASSSVLLDPLVVGEEHATTALEVRRAIEHYRELEDV 387


>gi|295109103|emb|CBL23056.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus obeum A2-162]
          Length = 464

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+P+D +    +      I    P    +    +  +TGI+V+D+  P   G 
Sbjct: 89  GRVFNLLGEPVD-NQPAPEAKERWSIHRPAPSYEEQMPATEILETGIKVVDLICPYAKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      + K+ 
Sbjct: 148 KIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGERTREGNDLYNEMKESGVIDKTA 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++   G +P
Sbjct: 208 LVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLFIDNIFRFTQAGSEVSALLGRMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  S LD   V
Sbjct: 268 SAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++ +G YP VDPL S SR L+ +    +  ++  S+  ++ R++E +DI  I G
Sbjct: 326 LSREISSQGIYPAVDPLDSTSRILSPEIVGTEHYEIARSVQRVLQRYKELQDIIAIMG 383


>gi|312194822|ref|YP_004014883.1| ATP synthase F1 subunit beta [Frankia sp. EuI1c]
 gi|311226158|gb|ADP79013.1| ATP synthase F1, beta subunit [Frankia sp. EuI1c]
          Length = 479

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V N LG+P+D +      + +  I    PP    +   + F+TGI+VID+  P   G 
Sbjct: 105 GHVFNVLGRPLDVESV--DAETTWAIHRSAPPFDQLESKTEMFETGIKVIDLLAPYVRGG 162

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYL-GDNLKKSV 218
           +IG+F G+G+GK+ ++    R  +  F  V + + VGER RE  +  E+      ++ + 
Sbjct: 163 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFEEMTEAGVIEDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L A+T+AEYF   K  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALAALTMAEYFRDVKKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQTV 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++++ G YP V PL S SR+ D  +   E       +  ++ R+++ +DI  I G
Sbjct: 341 LDRAISDLGIYPAVSPLESTSRILDARYVGQEHYDTAREVQRILQRYKDLQDIIAILG 398


>gi|261338636|ref|ZP_05966520.1| ATP synthase F1, beta subunit [Bifidobacterium gallicum DSM 20093]
 gi|270276355|gb|EFA22209.1| ATP synthase F1, beta subunit [Bifidobacterium gallicum DSM 20093]
          Length = 497

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 144 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 203

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 204 VSVFAGVGERTREGNDLIGEMEEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 263

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 264 VENQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERITSTRGH--S 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 322 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 381

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                +  + +  ++ R +E +D I LIG
Sbjct: 382 GQAHYECANRVKAILQRNKELQDIIALIG 410


>gi|167856121|ref|ZP_02478862.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755]
 gi|167852762|gb|EDS24035.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755]
          Length = 457

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P   ++    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEDQANSTELLETGIKVIDLIAPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQKTLQRYKELKDIIAILG 376


>gi|311281703|ref|YP_003943934.1| ATP synthase F1, beta subunit [Enterobacter cloacae SCF1]
 gi|308750898|gb|ADO50650.1| ATP synthase F1, beta subunit [Enterobacter cloacae SCF1]
          Length = 460

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVMDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|259046359|ref|ZP_05736760.1| ATP synthase F1 sector subunit beta [Granulicatella adiacens ATCC
           49175]
 gi|259036996|gb|EEW38251.1| ATP synthase F1 sector subunit beta [Granulicatella adiacens ATCC
           49175]
          Length = 474

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 152/299 (50%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID  +   +     EI    P         +  +TGI+VID+  P   G
Sbjct: 91  LGRVFNVLGDTIDLKEPFPEDFTRHEIHKPAPKFEELNSQYEILQTGIKVIDLLAPYLKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +     +  K+
Sbjct: 151 GKIGLFGGAGVGKTVLIQELIHNIAEELGGISVFTGVGERTREGNDLYHEMQESGVSAKT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 211 AMVFGQMNEPPGARMRVALTGLTIAEYFRDMEKQDVLLFIDNIYRFTQAGSEVSALLGRM 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  S  + G+IT++ ++ V  D++ DP   +  + LD   
Sbjct: 271 PSAVGYQPTLATEMGQLQERI--SSTKDGSITSIQAIYVPADDYTDPAPATTFAHLDATT 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  L  +    +  ++   +  ++ R+ E +DI  I G
Sbjct: 329 NLERRLTEQGIYPAVDPLASTSSALTPEIVGEEHYEVAMKVQQMLQRYRELQDIIAILG 387


>gi|213401036|gb|ACJ47166.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Nasonia
           longicornis]
          Length = 316

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 20/288 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+VID+  P   G
Sbjct: 25  GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 83

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 84  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 141

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +  
Sbjct: 142 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 201

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 202 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 259

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
             S LD   VL+R +AE G YP VDPL S S+        +E   V+S
Sbjct: 260 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 307


>gi|254361677|ref|ZP_04977814.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153093199|gb|EDN74210.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 457

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|223585573|gb|ACM91676.1| F1F0-ATP synthase beta subunit [Marsupenaeus japonicus]
          Length = 525

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +     S  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 138 LGRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKG 196

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 197 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISL 255

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RFA +  E+
Sbjct: 256 KDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFAQAGSEV 315

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 316 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 373

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S+SR+ D      E   V+ S+  ++   +  +D
Sbjct: 374 AHLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQD 433

Query: 389 IRLIGG 394
           I  I G
Sbjct: 434 IIAILG 439


>gi|91975039|ref|YP_567698.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisB5]
 gi|123749423|sp|Q13DP2|ATPB_RHOPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91681495|gb|ABE37797.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisB5]
          Length = 476

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +    L   I ++ P   ++    +   TGI+V+D+  P   G 
Sbjct: 90  GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211
           +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +    G
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    L+ +T+AE+F  +G +VL  +D+I RF  +  E++ 
Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390
           LD   VLNR+++E+G YP VDPL S SR+       +E    + +   ++ +++  +DI 
Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQKYKSLQDII 386

Query: 391 LIGG 394
            I G
Sbjct: 387 AILG 390


>gi|330815046|ref|YP_004358751.1| ATP synthase F1, beta subunit [Burkholderia gladioli BSR3]
 gi|327367439|gb|AEA58795.1| ATP synthase F1, beta subunit [Burkholderia gladioli BSR3]
          Length = 464

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +    L   I  K P         +  +TGI+VID+  P   G 
Sbjct: 89  GRIMDVLGRPIDEAGPIESEHLR-SIHQKAPAFDELSPSTELLETGIKVIDLVCPFAKGG 147

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P
Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   ++  +   + R++E RDI  I G
Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRGVQQTLQRYKELRDIIAILG 382


>gi|290957352|ref|YP_003488534.1| ATP synthase subunit beta [Streptomyces scabiei 87.22]
 gi|260646878|emb|CBG69975.1| ATP synthase beta chain [Streptomyces scabiei 87.22]
          Length = 478

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 177/327 (54%), Gaps = 17/327 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ +D+  +G+    I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNSEDTY-EGE-RWGIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+      + K+ 
Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMSESGVIDKTA 218

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 279 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 336

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + +AD       +  ++ ++++ +DI  I    
Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYNTAMRVKTVLQKYKDLQDIIAI---- 392

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 393 LGIDELGEEDKLTVHRARRVERFLSQN 419


>gi|148642494|ref|YP_001273007.1| V-type ATP synthase subunit B [Methanobrevibacter smithii ATCC
           35061]
 gi|222446007|ref|ZP_03608522.1| hypothetical protein METSMIALI_01655 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349454|ref|ZP_05974871.1| V-type sodium ATPase, B subunit [Methanobrevibacter smithii DSM
           2374]
 gi|167016633|sp|A5UKB1|VATB_METS3 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|148551511|gb|ABQ86639.1| vacuolar-type H+-transporting ATP synthase, subunit B
           [Methanobrevibacter smithii ATCC 35061]
 gi|222435572|gb|EEE42737.1| hypothetical protein METSMIALI_01655 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861817|gb|EFC94115.1| V-type sodium ATPase, B subunit [Methanobrevibacter smithii DSM
           2374]
          Length = 462

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 151/286 (52%), Gaps = 9/286 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I  S    GR+ N +GKPIDG   +   D  ++I        +R+  E+  +TGI  ID
Sbjct: 83  KIGVSRDMMGRMFNGIGKPIDGGPEIIP-DEELDINGSPMNPASREFPEEFIQTGISTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207
               L  GQ++ +F+GSG+  + L +  AR       D    VI + +G    E   F+ 
Sbjct: 142 GMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLGDDAEFAVIFAAMGITHEEANFFMR 201

Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHS 265
           D+     L+K  V +  +D+  I R + P  A+T AEYF+ + G  VL+IL  +T +  +
Sbjct: 202 DFERTGALEKVTVFMNLADDPAIERILTPKMALTTAEYFAFTLGMQVLVILTDMTNYCEA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI+    E+P  RGYP  ++++L  + ER G  + ++G+IT +  +++  D+   PI 
Sbjct: 262 LREISAARDEVPGRRGYPGYMYTDLANIYERAGRIDGKEGSITQMPILVMPQDDITHPIP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           D    I +G IVL+R L  +G YPPVD L S+SRL       D+ +
Sbjct: 322 DLTGYITEGQIVLSRELNRKGIYPPVDVLPSLSRLMSGGIGGDKTR 367


>gi|89574037|gb|ABD77244.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Felis catus]
          Length = 418

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 54  LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 112

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 113 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 171

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 172 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 231

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 232 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 289

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 290 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 349

Query: 389 IRLIGG 394
           I  I G
Sbjct: 350 IIAILG 355


>gi|296453449|ref|YP_003660592.1| ATP synthase F1 subunit beta [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296182880|gb|ADG99761.1| ATP synthase F1, beta subunit [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 490

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 197 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 256

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 257 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 314

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 315 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 374

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 375 GQAHYDCANRVKAILQRNKELQDIIALIG 403


>gi|31544510|ref|NP_853088.1| F0F1 ATP synthase subunit beta [Mycoplasma gallisepticum str.
           R(low)]
 gi|461567|sp|P33253|ATPB_MYCGA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|44302|emb|CAA45551.1| adenosinetriphosphatase [Mycoplasma gallisepticum]
 gi|31541355|gb|AAP56656.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str. R(low)]
 gi|284930564|gb|ADC30503.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str.
           R(high)]
          Length = 471

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+PID    +      M I    P   ++    + F+TGI+VID+  P   G
Sbjct: 90  LGRMFNVIGEPIDEKKPIDASVKRMSIHRPAPSFADQSNELEIFETGIKVIDLLIPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E   G  + K+
Sbjct: 150 GKIGLFGGAGVGKTVLVQELIHNIATGHGGLSVFAGVGERTREGNDLYYEMIEGGVIDKT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 210 ALVFGQMNEPPGARMRVALTGLTMAEYFRDVNNQDVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 270 PSAVGYQPTLAEEMGSLQERI--TSTKSGSITSVQAIYVPADDLTDPAPSTTFTHLDAKT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G +P V+PL S SRL D +       +    +  ++ +F E +DI  I G
Sbjct: 328 VLDRNIASLGIFPAVNPLDSTSRLLDPSVVGIQHYQTARKVQMILQKFLELQDIIAILG 386


>gi|170516897|gb|ACB15384.1| ATP synthase beta chain [Bifidobacterium longum]
          Length = 334

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 34  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 93

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 94  VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 153

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 154 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 211

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 212 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 271

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 272 GQAHYDCANRVKAILQRNKELQDIIALIG 300


>gi|213691226|ref|YP_002321812.1| ATP synthase F1, beta subunit [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254808133|sp|B7GTZ3|ATPB_BIFLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|213522687|gb|ACJ51434.1| ATP synthase F1, beta subunit [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457287|dbj|BAJ67908.1| ATP synthase beta subunit [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 490

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 197 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 256

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 257 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 314

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 315 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 374

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 375 GQAHYDCANRVKAILQRNKELQDIIALIG 403


>gi|254463430|ref|ZP_05076846.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium HTCC2083]
 gi|206680019|gb|EDZ44506.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium HTCC2083]
          Length = 474

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G P+D    +   D    I    P    +    +   TGI+VID+  P  
Sbjct: 84  ATLGRIMNVTGDPVDEQGPVA-ADARRPIHGDAPTFEQQSTATEILVTGIKVIDLLAPYT 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE   
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGV 200

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            + DNL  S   +V    +E P  R    LT +T+AE F    G +VL  +D+I RF  +
Sbjct: 201 IVPDNLPDSKIALVYGQMNEPPGARMRVALTGLTLAEQFRDDTGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  S  + G+IT+V +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--SSTKNGSITSVQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+RS++E+G YP VDPL S SRL D     DE  K+ + +  ++ R++
Sbjct: 319 ATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIIGDEHYKVATDVQQVLQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|46909243|gb|AAT06139.1| ATP synthase beta subunit [Enallagma aspersum]
          Length = 347

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    +   D    I +  P  +     ++   TGI+V+
Sbjct: 14  IRIPVGAETLGRIINVIGEPIDERGPITT-DKFAAIHADAPEFVEMSVEQEILVTGIKVV 72

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 73  DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 131

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 132 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 191

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 192 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 249

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR  D     A+   +      +
Sbjct: 250 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRXMDPNIIGAEHYNVARGAQKI 309

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 310 LQDYKSLQDIIAILG 324


>gi|291543824|emb|CBL16933.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus sp. 18P13]
          Length = 465

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 169/337 (50%), Gaps = 10/337 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  D+V    +G  + +  G D V      R+       GRV N LG+P+D D    +  
Sbjct: 48  IGDDVVRCIAMGTTDGLVRGTDAVDTGSPIRVPVGRETLGRVFNLLGEPVD-DKPAPQVK 106

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  + P    +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 107 EHWAIHREAPSYEEQTASSQVLETGIKVIDLIAPYLKGGKIGLFGGAGVGKTVLIQELIN 166

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +       IS+   VGER RE  +   +      + K+V+V    +E P  R    L+ +
Sbjct: 167 NVANQHGGISVFTGVGERTREGNDLYNEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGL 226

Query: 240 TIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 227 TMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI- 285

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++  G YP VDPL S S
Sbjct: 286 -TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQISSLGIYPAVDPLDSTS 344

Query: 359 R-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           R L  +    +  ++  ++  ++ R+ E +DI  I G
Sbjct: 345 RILTPEIVGQEHYEVARAVQTILQRYTELQDIIAIMG 381


>gi|255582911|ref|XP_002532227.1| ATP synthase beta subunit, putative [Ricinus communis]
 gi|223528084|gb|EEF30158.1| ATP synthase beta subunit, putative [Ricinus communis]
          Length = 561

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 164/310 (52%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    L K D  + I  + P  +++   ++   TGI+V+D+  P  
Sbjct: 169 ATLGRIINVIGEPIDEKGDL-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDMLAPYQ 227

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 228 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 286

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 287 KLGDKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 346

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 347 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 404

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SR+       +E       +  ++  ++
Sbjct: 405 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 464

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 465 NLQDIIAILG 474


>gi|182677217|ref|YP_001831363.1| F0F1 ATP synthase subunit beta [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633100|gb|ACB93874.1| ATP synthase F1, beta subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 482

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 167/319 (52%), Gaps = 27/319 (8%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKG-FKTGIRVID 153
           P    C GR++N +G+P+D    LG  + +    + ++ PA + Q  E     TGI+V+D
Sbjct: 85  PVGEECLGRILNVIGEPVD---ELGPVNTTARRAIHQLAPAYDEQSTEAQILVTGIKVVD 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G ++G+F G+G+GK+     L++  A++     V    VGER RE      E 
Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVIIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEM 200

Query: 206 IEDYL-------GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           IE ++       G + K  K  +V    +E P  R    L+ +TIAE F  KG +VL  +
Sbjct: 201 IESHVNVDPHEHGGSAKGSKCALVYGQMNEPPGARARVALSGLTIAEDFRDKGQDVLFFV 260

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V 
Sbjct: 261 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVP 318

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+       +E   V+  
Sbjct: 319 ADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPLIVGEEHYNVARQ 378

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  L+ R++  +DI  I G
Sbjct: 379 VQQLLQRYKSLQDIIAILG 397


>gi|46909255|gb|AAT06145.1| ATP synthase beta subunit [Stylochus sp. KJP-2004]
          Length = 427

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 162/307 (52%), Gaps = 19/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +    LS  I +  P   +    ++  +TGI+V+D+  P   G
Sbjct: 64  LGRIINVIGEPIDERGPINAKMLS-SIHADAPDFEDMSTEQEILETGIKVVDLLAPYARG 122

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--------VREFIEDY 209
            +IG+F G+G+GK+ L+    +  AR+     V    VGER RE        ++  + D 
Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMIQTGVVDL 181

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            G+N  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 182 KGNN-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 240

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   + 
Sbjct: 241 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATT 298

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD   VL+R +AE G YP VDPL S+SR+ D      E   V+  +  ++  +   +
Sbjct: 299 FAHLDATTVLSRGIAELGIYPAVDPLDSMSRILDPNIVGTEHYTVAKGVQKILQDYRSLQ 358

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 359 DIIAILG 365


>gi|45358608|ref|NP_988165.1| V-type ATP synthase subunit B [Methanococcus maripaludis S2]
 gi|74572167|sp|Q6LYE6|VATB_METMP RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|44921366|emb|CAF30601.1| A1A0 ATPase, subunit B [Methanococcus maripaludis S2]
          Length = 462

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 169/337 (50%), Gaps = 26/337 (7%)

Query: 43  VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99
           +  G+ V     N D   GQV+    +I  +       E++  +  + F     +I  S 
Sbjct: 29  IAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSY 88

Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
              GR+ N  GKP+DG      ++ L      +  +S+ PP    Q       TG+  ID
Sbjct: 89  DMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQ-------TGVSTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206
               L  GQ+I +F+GSG+  + L +  AR        + F  V+ + +G  G E   F+
Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAAMGITGEESNYFM 200

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L+K+VV +  +D+  I R + P  A+T AEY +  KG +VL+IL  +T +  
Sbjct: 201 DEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCE 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REIA    E+P  RGYP  ++++L  L ER G  + ++G +T +  + +  D+   PI
Sbjct: 261 ALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPI 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            D    I +G IVL+R L  +G YPPVD L S+SRLA
Sbjct: 321 PDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRLA 357


>gi|23336548|ref|ZP_00121760.1| COG0055: F0F1-type ATP synthase, beta subunit [Bifidobacterium
           longum DJO10A]
 gi|23464956|ref|NP_695559.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum NCC2705]
 gi|189439986|ref|YP_001955067.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum DJO10A]
 gi|227545748|ref|ZP_03975797.1| H(+)-transporting two-sector ATPase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239622549|ref|ZP_04665580.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133381|ref|YP_004000720.1| atpd [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481935|ref|ZP_07940960.1| ATP synthase F1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688429|ref|YP_004208163.1| ATP synthase subunit betaeta [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322690448|ref|YP_004220018.1| ATP synthase beta subunit [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|81847339|sp|Q8G7B3|ATPB_BIFLO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739981|sp|B3DTV0|ATPB_BIFLD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|23325553|gb|AAN24195.1| ATP synthase beta chain [Bifidobacterium longum NCC2705]
 gi|189428421|gb|ACD98569.1| F0F1-type ATP synthase beta subunit [Bifidobacterium longum DJO10A]
 gi|227213864|gb|EEI81703.1| H(+)-transporting two-sector ATPase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239514546|gb|EEQ54413.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517458|emb|CBK71074.1| ATP synthase, F1 beta subunit [Bifidobacterium longum subsp. longum
           F8]
 gi|311772607|gb|ADQ02095.1| AtpD [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916502|gb|EFV37899.1| ATP synthase F1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455304|dbj|BAJ65926.1| ATP synthase beta subunit [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320459765|dbj|BAJ70385.1| ATP synthase beta subunit [Bifidobacterium longum subsp. infantis
           157F]
          Length = 490

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 197 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 256

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 257 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 314

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 315 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 374

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 375 GQAHYDCANRVKAILQRNKELQDIIALIG 403


>gi|283787579|ref|YP_003367444.1| ATP synthase subunit beta [Citrobacter rodentium ICC168]
 gi|282951033|emb|CBG90711.1| ATP synthase beta subunit [Citrobacter rodentium ICC168]
          Length = 460

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I    P        ++  +TGI+VID+ 
Sbjct: 83  ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRDAPSYEELSNSQELLETGIKVIDLM 137

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P + GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 258 LLGRMPSSVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI 
Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375

Query: 391 LIGG 394
            I G
Sbjct: 376 AILG 379


>gi|156050413|ref|XP_001591168.1| ATP synthase beta chain, mitochondrial [Sclerotinia sclerotiorum
           1980]
 gi|154692194|gb|EDN91932.1| ATP synthase beta chain, mitochondrial [Sclerotinia sclerotiorum
           1980 UF-70]
          Length = 518

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 154/307 (50%), Gaps = 15/307 (4%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR++N  G PID    + K D  + I +  PP   +    +   TGI+V+D+  P 
Sbjct: 119 AGTLGRIMNVTGDPIDERGPI-KTDKRLPIHADAPPFTEQSTTAEVLVTGIKVVDLLAPY 177

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211
             G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +      
Sbjct: 178 ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSV 236

Query: 212 ---DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
              D   K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I RF  +  E
Sbjct: 237 IQLDGDSKVALVFGQMNEPPGARARVALTGLTLAEQFREEGQDVLLFIDNIFRFTQAGSE 296

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   + 
Sbjct: 297 VSALLGRIPSAVGYQPTLAVDMGSMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 354

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +
Sbjct: 355 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGQDHYDTATRVQQMLQEYKSLQ 414

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 415 DIIAILG 421


>gi|153809937|ref|ZP_01962605.1| hypothetical protein RUMOBE_00318 [Ruminococcus obeum ATCC 29174]
 gi|149834115|gb|EDM89195.1| hypothetical protein RUMOBE_00318 [Ruminococcus obeum ATCC 29174]
          Length = 464

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 157/302 (51%), Gaps = 10/302 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           AC  GRV N LG P+D +    +      I    P    +    +  +TGI+V+D+  P 
Sbjct: 86  ACL-GRVFNLLGDPVD-NKPAPEAKERWSIHRPAPSYEEQMPATEILETGIKVVDLICPY 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      +
Sbjct: 144 AKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGERTREGNDLYNEMKESGVI 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++   
Sbjct: 204 DKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLFIDNIFRFTQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  S LD
Sbjct: 264 GRMPSAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFSHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R ++ +G YP VDPL S SR L+ +    +  ++  S+  ++ R++E +DI  I
Sbjct: 322 ATTVLSREISSQGIYPAVDPLDSTSRILSPEIVGKEHYEIARSVQRVLQRYKELQDIIAI 381

Query: 393 GG 394
            G
Sbjct: 382 MG 383


>gi|310778011|ref|YP_003966344.1| ATP synthase F1 subcomplex beta subunit [Ilyobacter polytropus DSM
           2926]
 gi|309747334|gb|ADO81996.1| ATP synthase F1 subcomplex beta subunit [Ilyobacter polytropus DSM
           2926]
          Length = 467

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 24/333 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIF 155
              GR++N LG+PID       G++  E  S +    PA   Q  E + F+TGI+VID+ 
Sbjct: 84  AVLGRILNVLGEPIDQ-----AGEVKAEEYSSIHREAPAFEDQGTEVEIFETGIKVIDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+  ++    
Sbjct: 139 APYVKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLFDEMTES 198

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
             L K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++
Sbjct: 199 GVLSKTSLVYGQMNEPPGARLRVALTGLTMAENFRDKEGQDVLLFIDNIFRFTQAGSEVS 258

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 259 ALLGRMPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFT 316

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R +A  G YP VDPL S S       +  E    +  +  ++ R++E +DI
Sbjct: 317 HLDATTVLSRRIASLGIYPAVDPLDSTSTALQPGITGHEHYTAAREVQSVLQRYKELQDI 376

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     G+D + D+   AV++   I  F  Q
Sbjct: 377 IAI----LGMDELSDEDKIAVNRARKIERFFSQ 405


>gi|113204646|gb|ABI34071.1| F1-ATP synthase beta subunit [Pacifastacus leniusculus]
          Length = 525

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 163/309 (52%), Gaps = 25/309 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR+IN +G+PID      +G +  E  S +    P  +N    ++   TGI+V+D+  P 
Sbjct: 139 GRIINVIGEPIDE-----RGPVPTEFYSAIHAEAPDFVNMSVEQEILVTGIKVVDLLAPY 193

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED-- 208
             G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE   
Sbjct: 194 SKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGV 252

Query: 209 -YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  + 
Sbjct: 253 ISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 312

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   
Sbjct: 313 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 370

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R +AE G YP VDPL S+SR+ D     A+   +  ++  ++   + 
Sbjct: 371 TTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDPNIIGAEHYNVARAVQKILQDHKS 430

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 431 LQDIIAILG 439


>gi|323490921|ref|ZP_08096116.1| F0F1 ATP synthase subunit beta [Planococcus donghaensis MPA1U2]
 gi|323395401|gb|EGA88252.1| F0F1 ATP synthase subunit beta [Planococcus donghaensis MPA1U2]
          Length = 471

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 177/347 (51%), Gaps = 16/347 (4%)

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V   GR    P      GRV N LG+ ID  + +   +    I    P   +     
Sbjct: 71  GSVVTDLGRAISVPVGDVTLGRVFNVLGEIIDLGEEIPLTERRDPIHRSAPTFEHLSTEV 130

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERG 199
           +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   +S+   VGER 
Sbjct: 131 EILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSVFAGVGERT 190

Query: 200 REVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257
           RE  + F E      +KK+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D
Sbjct: 191 REGNDLFHEMSESGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGADVLLFID 250

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  
Sbjct: 251 NIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TTTSAGSVTSIQAIYVPA 308

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSL 376
           D++ DP   +  + LD    L R L+E G YP VDPLAS SR L+ +   A+   +   +
Sbjct: 309 DDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAISREV 368

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
              + R+ E +DI  I     G+D + D+    V++   + +FL Q+
Sbjct: 369 QETLQRYRELQDIIAI----LGMDELSDEDKLTVNRARRVQNFLSQN 411


>gi|320096093|ref|ZP_08027693.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976973|gb|EFW08716.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 482

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 154/274 (56%), Gaps = 11/274 (4%)

Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++     K F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           D   +S+   VGER RE  + I++ +G+     K+ +V    DE P  R    LT +T+A
Sbjct: 187 DHGGVSVFAGVGERTREGNDLIKE-MGEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+ +L ERI  + 
Sbjct: 246 EYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
               +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPLAS SR+ 
Sbjct: 304 AGGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASTSRIL 363

Query: 362 DKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           D A    E   V++ +  ++ + +E +DI  I G
Sbjct: 364 DPALVGREHYDVATHVKAILQKNKELQDIIAILG 397


>gi|296802112|gb|ADH51554.1| mitochondrial H+-transporting ATP synthase F1 complex beta
           polypeptide [Rousettus leschenaultii]
          Length = 479

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 114 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 172

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 173 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 231

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 232 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 291

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 292 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 349

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 350 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 409

Query: 389 IRLIGG 394
           I  I G
Sbjct: 410 IIAILG 415


>gi|283975502|gb|ADB55725.1| ATP synthase beta chain [Pseudozyma flocculosa]
          Length = 414

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 20/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    + KG+    I  + P  +++    +  +TGI+V+D+  P   G 
Sbjct: 30  GRIMNVIGEPMDERGPI-KGNKLSPIHVEPPAFVDQSTTAEVLETGIKVVDLLAPYARGG 88

Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L+       A++     V    VGER RE      E IE    +  
Sbjct: 89  KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFTG-VGERTREGNDLYHEMIETGVINLE 147

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E 
Sbjct: 148 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSET 205

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  
Sbjct: 206 SALLGRIPSAVGYQPTLATDMGVMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTF 263

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D A    E   + + +  L+  ++  +D
Sbjct: 264 AHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPAIVGREHYDIATGVQKLLQDYKSLQD 323

Query: 389 IRLIGG 394
           I  I G
Sbjct: 324 IIAILG 329


>gi|317130747|ref|YP_004097029.1| ATP synthase F1 subunit beta [Bacillus cellulosilyticus DSM 2522]
 gi|315475695|gb|ADU32298.1| ATP synthase F1, beta subunit [Bacillus cellulosilyticus DSM 2522]
          Length = 470

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ ID D  +        I  + P         +  +TGI+V+D+  P   G
Sbjct: 92  LGRVFNVLGENIDLDAPIPDSVRRDPIHRQAPVYEELSTETEILETGIKVVDLLAPYIKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+ +T+AEYF   KG +VLL +D+I RF  +  E++   G +
Sbjct: 212 AMVFGQMNEPPGARMRVALSGLTMAEYFRDEKGADVLLFIDNIFRFTQAGGEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD   
Sbjct: 272 PSAVGYQPTLATEMGMLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L R L+E G YP VDPLAS SR        DE  ++   +   + +++E +DI  I G
Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSPEVCGDEHYEVARQVQQTLQKYKELQDIIAILG 388


>gi|38906105|gb|AAR27805.1| ATP synthase beta chain [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 373

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|38906107|gb|AAR27806.1| ATP synthase beta chain [Bifidobacterium longum subsp. suis]
          Length = 373

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|34500032|gb|AAQ73598.1| ATP synthase beta subunit [Avibacterium gallinarum]
          Length = 444

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 153/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G  + +  I    P   ++    +  +TGI+VID+  P   G 
Sbjct: 83  GRIMNVLGEPIDEQGPIG-AEETWSIHRPAPSYEDQANSTELLETGIKVIDLICPFAKGG 141

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  
Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKVS 201

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 262 AVGYQPTLAEEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S SR  D      E   V+  +     R+ E +DI  I G
Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGTYKRYRELKDIIAILG 376


>gi|2493028|sp|Q25117|ATPB_HEMPU RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|391913|dbj|BAA04178.1| H(+)-transporting ATPase beta subunit [Hemicentrotus pulcherrimus]
 gi|1094359|prf||2105433A H ATPase:SUBUNIT=beta
          Length = 523

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 148/272 (54%), Gaps = 16/272 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +G  D    I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 137 GRIINVIGEPIDERGPIGT-DRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGG 195

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L 
Sbjct: 196 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISLK 254

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 255 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 314

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 315 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 372

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 373 HLDATTVLSRGIAELGIYPAVDPLDSSSRIMD 404


>gi|261491751|ref|ZP_05988331.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495499|ref|ZP_05991946.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308833|gb|EEY10089.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312590|gb|EEY13713.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 463

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 88  LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 147 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 207 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 266

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 267 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 324

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 325 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 382


>gi|126343750|ref|XP_001364069.1| PREDICTED: similar to ATP synthase subunit beta, mitochondrial
           [Monodelphis domestica]
          Length = 525

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 138 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 196

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 197 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 255

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 256 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 315

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 316 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 373

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 374 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 433

Query: 389 IRLIGG 394
           I  I G
Sbjct: 434 IIAILG 439


>gi|332289264|ref|YP_004420116.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179]
 gi|330432160|gb|AEC17219.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179]
          Length = 457

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+      I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|301761023|ref|XP_002916040.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281353277|gb|EFB28861.1| hypothetical protein PANDA_004098 [Ailuropoda melanoleuca]
          Length = 528

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|38710233|gb|AAR27321.1| AtpD [Bifidobacterium animalis]
 gi|38710235|gb|AAR27322.1| AtpD [Bifidobacterium animalis subsp. lactis]
 gi|38710237|gb|AAR27323.1| AtpD [Bifidobacterium animalis subsp. lactis]
 gi|38710241|gb|AAR27325.1| AtpD [Bifidobacterium animalis subsp. lactis]
 gi|38710243|gb|AAR27326.1| AtpD [Bifidobacterium animalis]
          Length = 377

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I +      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|313673547|ref|YP_004051658.1| ATP synthase f1 subcomplex beta subunit [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940303|gb|ADR19495.1| ATP synthase F1 subcomplex beta subunit [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 468

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G P+D    +   D    I    P   ++       +TGI+VID+  P   G 
Sbjct: 89  GRILNVVGDPVDEKGPVDAVDY-WPIHRPAPKLEDQDTGSNILETGIKVIDLLEPYTKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ L+     +        S+   VGER RE  + ++E      L K  
Sbjct: 148 KTGLFGGAGVGKTVLIMELINNIAKQHGGYSVFCGVGERTREGNDLYLEMKESGVLDKVA 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 208 LVYGQMNEPPGARMRVGLTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 268 SAVGYQPTLGTEMGELQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR+ D      E   V+  +  ++ R++E +DI  I G
Sbjct: 326 LSRQIAELGIYPAVDPLDSTSRILDPNIVGVEHYTVAREVQKILQRYKELQDIIAILG 383


>gi|289651622|ref|ZP_06482965.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi
           str. 2250]
          Length = 277

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 3/202 (1%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V++ PVG    I+ G  V       R+       GRV++  G+P+DG   +   D     
Sbjct: 77  VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
              + P + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D
Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE  LG + LK+SVVV + +D++P++R  A +    IAEYF  
Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255

Query: 248 KGDNVLLILDSITRFAHSIREI 269
           KG NVLL++DS+TRFA + REI
Sbjct: 256 KGKNVLLLMDSLTRFAQAQREI 277


>gi|284999825|dbj|BAI67813.1| ATP synthase beta-subunit [Asterococcus korschikoffii]
          Length = 376

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  K D ++ I  K P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVKTDQTLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    L+A+T+AEYF    G +VL  +D+I RF  +
Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDFNGQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +    LD   VL+R+LA +G YP VDPL S S +  + W   +K      S+   + R+
Sbjct: 264 STTFVHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYNCAQSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|258690462|gb|ACV87993.1| ATP synthase beta subunit [Haliclona sp. KJP-2009]
          Length = 427

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 18/330 (5%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G++    G   RI       GR+IN +G+PID    +G    +  I ++ P   +
Sbjct: 40  EGLVRGEVCLDMGTPIRIPVGPKTLGRIINVIGEPIDERGPIGSEHFA-NIHAEAPDFED 98

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIIS 193
               ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   
Sbjct: 99  MSTDQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 158

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245
            VGER RE  +   +        L D+  K  +V    +E P  R    LT +T+AEYF 
Sbjct: 159 -VGERTREGNDLYHEMITSGVISLKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFR 217

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG
Sbjct: 218 DQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKG 275

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D   
Sbjct: 276 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNI 335

Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
              E   V+  +  ++  ++  +DI  I G
Sbjct: 336 VGQEHYSVARGVQKILQDYKSLQDIIAILG 365


>gi|296446128|ref|ZP_06888076.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b]
 gi|296256322|gb|EFH03401.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b]
          Length = 486

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 162/314 (51%), Gaps = 30/314 (9%)

Query: 103 GRVINALGKPID---GDDSLGK----------------GDLSMEIMSKVPPAMNRQRVEK 143
           GR + A G PI    GD +LG+                 D     + + PP +  QR   
Sbjct: 78  GRRVRATGGPIAIPVGDATLGRLIDVTGAIGDNGPPLPADAPRRPIHRAPPPLA-QRPGG 136

Query: 144 G--FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGER 198
           G  F TGI++ID+ TP+  G +  +F G+G+GK+ L+   + A    +  V + + VGER
Sbjct: 137 GEIFATGIKIIDLLTPIAQGGKAAMFGGAGVGKTVLVMELIHAMVSGYRGVSVFAGVGER 196

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
            RE  E + D      L+++V+V    +E P  R  APL A+TIAEYF   K  NVLL++
Sbjct: 197 SREGHELLLDMARSGVLERTVLVYGQMNEPPGARWRAPLAALTIAEYFRDEKRQNVLLLM 256

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G  P   GY  ++ SE+  L ERI  +      +TA+ +V V 
Sbjct: 257 DNIFRFVQAGAEVSGLLGRSPSRVGYQPTLASEVAALHERI--ASVGGVGVTAIEAVYVP 314

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSS 375
            D+  DP   ++ + +D  IVL+R +A EG YP +DP+AS S L D     +   ++ + 
Sbjct: 315 ADDFTDPAVTTIATHIDSMIVLSRQMAAEGMYPAIDPIASSSVLLDPLVVGEAHAEVATE 374

Query: 376 LTHLIHRFEETRDI 389
           +  +I  + E +D+
Sbjct: 375 VRRVIEHYLELQDV 388


>gi|260753212|ref|YP_003226105.1| F0F1 ATP synthase subunit beta [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552575|gb|ACV75521.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 484

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 21/319 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR++N +G+P+D    +G    +M I +  PP   +        TGI+VID
Sbjct: 83  RVPVGPETLGRIMNVVGRPVDERGPIGSKQ-TMPIHADAPPFTEQSTDTAILTTGIKVID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G ++G+F G+G+GK+ L+     +         + + VGER RE      EF+
Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFL 201

Query: 207 E------DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
           E      D  G+ +    K  +V    +E P  R    L+ +T+AEYF   +G +VL  +
Sbjct: 202 EAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFV 261

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  +KG+IT+V ++ V 
Sbjct: 262 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKKGSITSVQAIYVP 319

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+R+++E G YP VDPL S SR  +     DE  K    
Sbjct: 320 ADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPRIVGDEHYKTARD 379

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ R++  +DI  I G
Sbjct: 380 VQEILQRYKNLQDIIAILG 398


>gi|112791364|gb|ABI21952.1| ATP synthase beta subunit [Enterobacter cancerogenus]
          Length = 421

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|310828005|ref|YP_003960362.1| H(+)-transporting two-sector ATPase [Eubacterium limosum KIST612]
 gi|308739739|gb|ADO37399.1| H(+)-transporting two-sector ATPase [Eubacterium limosum KIST612]
          Length = 461

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 185/387 (47%), Gaps = 30/387 (7%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           I+ +  V+Y      Q    G+  V +GK     G  I +    V+    G+  E S+  
Sbjct: 18  ITDVEDVFYGEVVNIQDQATGE--VKKGKVIKIDGTTITVQ---VFQSTAGLAAENSVTR 72

Query: 86  LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA----MNRQRV 141
             F    F+I  S    GRV N +G+PID        D+   I S +  A    M+R+  
Sbjct: 73  --FTGDAFKIPMSMDLMGRVFNGIGEPIDN-----GADIFSTIESNINGAPINPMSREYP 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----SDCFDK---VIISL 194
               +TGI  ID+   L  GQ++ + +G+G+  + L +   R    SD  D+   ++ + 
Sbjct: 126 RNFIQTGISAIDVLMTLIRGQKLPILSGNGLSHNELAAQIVRQAKLSDDVDEQFAIVFAA 185

Query: 195 VGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NV 252
           +G +  + + F + +   N+   VV+     + P+  R  AP  A+T+AEY + + D ++
Sbjct: 186 IGVKHDDEKFFRKTFEEANVMDRVVMFVNYADDPVAERNTAPRCALTVAEYLAFQKDMHI 245

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+++  IT +   +REI++   E+P  +GYP  ++S+L  L ER G  +  KG+IT +  
Sbjct: 246 LVVMSDITAYCEGLREISSAREEVPSRKGYPGYMYSDLAALYERAGMLKSSKGSITFLPI 305

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSA 367
           + +  D+   PI D    I +G IVL R L +   YPP+D L S+SRL      +     
Sbjct: 306 LTMPNDDITHPIPDLTGYITEGQIVLGRDLFQRSIYPPIDVLPSLSRLMKDGIGEGYTRE 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           D + L + L     R +E RD+  I G
Sbjct: 366 DHQDLANQLFAAYSRVQEVRDLSQIMG 392


>gi|163751422|ref|ZP_02158647.1| ATP synthase subunit B [Shewanella benthica KT99]
 gi|161328725|gb|EDP99873.1| ATP synthase subunit B [Shewanella benthica KT99]
          Length = 458

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           +   GR++N LG+PID    +G  D  + I  + P    +    +  +TGI+VID+  P 
Sbjct: 80  SVTLGRIMNVLGEPIDEAGPIGGTDHYV-IHREAPTFEEQSSSTELLETGIKVIDLICPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDAGV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   
Sbjct: 198 LDKVTMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFFIDNIYRYTLAGTEVSALL 257

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLD 315

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             IVL+R++A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I
Sbjct: 316 ATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAI 375

Query: 393 GG 394
            G
Sbjct: 376 LG 377


>gi|237785857|ref|YP_002906562.1| F0F1 ATP synthase subunit beta [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585442|sp|C4LJL4|ATPB_CORK4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|237758769|gb|ACR18019.1| ATP synthase beta chain [Corynebacterium kroppenstedtii DSM 44385]
          Length = 478

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 167/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D +  LG+      I  K PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 100 GHVFNALGDCLD-EPGLGRDGEQWSIHRK-PPAFDQLEGKTEILETGIKVIDLLTPYVKG 157

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 158 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 217

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF+ +  E++T  G +
Sbjct: 218 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFSQAGSEVSTLLGRM 277

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +V + LD   
Sbjct: 278 PSAVGYQPTLADEMGELQERITSTKGR--SITSLQAVYVPADDYTDPAPATVFAHLDATT 335

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+RS+A +G YP V+PL S SR+ +     +E  ++   + +++ + +E +DI  I G
Sbjct: 336 ELDRSIASKGIYPAVNPLTSTSRILEPGIVGEEHYQVAQRVINILQKNKELQDIIAILG 394


>gi|154488032|ref|ZP_02029149.1| hypothetical protein BIFADO_01601 [Bifidobacterium adolescentis
           L2-32]
 gi|154083505|gb|EDN82550.1| hypothetical protein BIFADO_01601 [Bifidobacterium adolescentis
           L2-32]
          Length = 494

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 318

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                +  + +  ++ R +E +D I LIG
Sbjct: 379 GQAHYECANRVKAILQRNKELQDIIALIG 407


>gi|170744668|ref|YP_001773323.1| F0F1 ATP synthase subunit beta [Methylobacterium sp. 4-46]
 gi|168198942|gb|ACA20889.1| ATP synthase F1, beta subunit [Methylobacterium sp. 4-46]
          Length = 484

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 163/320 (50%), Gaps = 23/320 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151
            ++   A   GR++N +G+PID   ++     S   + +  P+   Q  E     TGI+V
Sbjct: 86  IKVPVGANTLGRIMNVIGEPIDEAGAIEA--QSFRAIHQPAPSYAEQSTEAQILVTGIKV 143

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203
           +D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      
Sbjct: 144 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAG-VGERTREGNDLYH 202

Query: 204 EFIEDYLGDNLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           E IE  +  + K        K  +V    +E P  R    LT +T+AE+F  +G +VL  
Sbjct: 203 EMIESKVNMDPKEHGSAEGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDEGQDVLFF 262

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V
Sbjct: 263 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYV 320

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374
             D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+       +E    + 
Sbjct: 321 PADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPTILGEEHYATAR 380

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +  ++ R++  +DI  I G
Sbjct: 381 RVQQVLQRYKALQDIIAILG 400


>gi|108800840|ref|YP_641037.1| F0F1 ATP synthase subunit beta [Mycobacterium sp. MCS]
 gi|119869980|ref|YP_939932.1| F0F1 ATP synthase subunit beta [Mycobacterium sp. KMS]
 gi|122976658|sp|Q1B553|ATPB_MYCSS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358685|sp|A1UJY4|ATPB_MYCSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|108771259|gb|ABG09981.1| ATP synthase F1, beta subunit [Mycobacterium sp. MCS]
 gi|119696069|gb|ABL93142.1| ATP synthase F1, beta subunit [Mycobacterium sp. KMS]
          Length = 509

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG  +D D   GK D     + + PPA +    R E   +TG++V+D+ TP   
Sbjct: 103 GHVFNALGACLD-DPGYGK-DFEKWSIHRKPPAFDELEPRTEM-LETGLKVVDLLTPYVR 159

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK 
Sbjct: 160 GGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKD 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   K  +VLL +D+I RF  +  E++T  G 
Sbjct: 220 TALVFGQMDEPPGTRMRVALSALTMAEYFRDEKQQDVLLFIDNIFRFTQAGSEVSTLLGR 279

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD  
Sbjct: 280 MPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDAT 337

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+RS+  +G +P VDPLAS S + D +   DE  ++   +  ++ R+++ +DI  I G
Sbjct: 338 TELSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 397


>gi|18033073|gb|AAL56978.1|AF326330_1 ATP synthase [Avibacterium gallinarum]
          Length = 431

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 153/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G  + +  I    P   ++    +  +TGI+VID+  P   G 
Sbjct: 72  GRIMNVLGEPIDEQGPIG-AEETWSIHRPAPSYEDQANSTELLETGIKVIDLICPFAKGG 130

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  
Sbjct: 131 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKVS 190

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 191 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 250

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 251 AVGYQPTLAEEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 308

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S SR  D      E   V+  +     R+ E +DI  I G
Sbjct: 309 SRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGTYKRYRELKDIIAILG 365


>gi|114331986|ref|YP_748208.1| ATP synthase F1, alpha subunit [Nitrosomonas eutropha C91]
 gi|122313307|sp|Q0AEI9|ATPA2_NITEC RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|114309000|gb|ABI60243.1| ATP synthase F1, alpha subunit [Nitrosomonas eutropha C91]
          Length = 516

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 171/333 (51%), Gaps = 17/333 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME--I 128
           I  +G  E+I LG+ V+   +    P  +   GRVI+A+G+P    D+LG  D   E  I
Sbjct: 81  IILLGPSEQIHLGETVYRTRKVVSVPVGSALLGRVIDAMGRP---RDTLGPIDAIAEHPI 137

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFAR 183
            ++ P  +NR ++ +   TG++ ID   P+  GQR  +      GK+     T+L+  AR
Sbjct: 138 EAEAPSILNRTQIFRPLATGLKAIDAAIPVGLGQRELIIGDRQTGKTSIAIDTMLNQ-AR 196

Query: 184 SDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           SD     I   VG+RG  V   I     G+ L++ +V+ A  +E+P L  +AP  A+T+A
Sbjct: 197 SDVL--CIYCAVGQRGDAVARVIRALKDGEMLQRCIVMSAGDEEAPGLSYIAPYAAMTMA 254

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300
           EYFS++G +VL+I D +T  A S RE++      P    +P  +F    RLLER G   +
Sbjct: 255 EYFSAQGQDVLVIFDDMTHHARSYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFGA 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G+IT +  V     N +  I  ++ SI DG I L+  L  + ++P VD   SVSR+
Sbjct: 315 DIGGGSITTLPVVETQAGNLSAYIPTNLISITDGQIYLSPQLVRKNQFPAVDLGLSVSRV 374

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             KA +   + +  +L   + +FEE  D    G
Sbjct: 375 GSKAQNRTLRGVSGNLRVTLSQFEELEDFARFG 407


>gi|262201860|ref|YP_003273068.1| ATP synthase F1 subunit beta [Gordonia bronchialis DSM 43247]
 gi|262085207|gb|ACY21175.1| ATP synthase F1, beta subunit [Gordonia bronchialis DSM 43247]
          Length = 482

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D   + G+      I  K PP    +   +  +TGI+VID+ TP   G 
Sbjct: 104 GHVFNALGDCLDAPGT-GRDGEQWSIHRKPPPFDELEGKTEILETGIKVIDLLTPYVKGG 162

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ + 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   K  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRMRVALSALTMAEYFRDEKHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +  +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 283 SAVGYQPTLADEMGELQERI--TSTKGRSITSLQAIYVPADDYTDPAPATTFAHLDATTE 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +++ G YP VDPL S SR+ + +   DE  ++ + +  ++ +++E +DI  I G
Sbjct: 341 LSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 398


>gi|89898927|ref|YP_521398.1| F0F1 ATP synthase subunit beta [Rhodoferax ferrireducens T118]
 gi|118573732|sp|Q223D6|ATPB1_RHOFD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|89343664|gb|ABD67867.1| ATP synthase F1, beta subunit [Rhodoferax ferrireducens T118]
          Length = 474

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 194/402 (48%), Gaps = 27/402 (6%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           +A+D   N  VQG  +  I +V        Q   + D +  +G ++  L    ++   IV
Sbjct: 1   MAQDTQTNTAVQGKIVQCIGAVVDVEFPRDQMPKIYDALKLEG-SALTLEVQQQLGDGIV 59

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME-- 127
               +G  + +  G +V +     + P      GR+++ LG PID      +G +S E  
Sbjct: 60  RTIALGSSDGLRRGLMVSNTANPIMVPVGTATLGRIMDVLGTPIDE-----RGPVSTEKY 114

Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMF 181
             I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  
Sbjct: 115 ASIHRKAPTYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNI 174

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKM 233
           A++     V    VGER RE  +F  +         +NL +S V  V    +E P  R  
Sbjct: 175 AKAHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLR 233

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
             LT +TIAE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ RL
Sbjct: 234 VALTGLTIAESFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 293

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 294 QERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDP 351

Query: 354 LASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L S SR  D      D  +   ++   + R++E RDI  I G
Sbjct: 352 LDSTSRQLDPNVVGQDHYETARAVQGTLQRYKELRDIIAILG 393


>gi|293611147|ref|ZP_06693445.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826398|gb|EFF84765.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124141|gb|ADY83664.1| F0F1 ATP synthase subunit beta [Acinetobacter calcoaceticus PHEA-2]
          Length = 464

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  ++ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|228474924|ref|ZP_04059653.1| ATP synthase F1, beta subunit [Staphylococcus hominis SK119]
 gi|314935948|ref|ZP_07843298.1| ATP synthase F1, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271156|gb|EEK12536.1| ATP synthase F1, beta subunit [Staphylococcus hominis SK119]
 gi|313655954|gb|EFS19696.1| ATP synthase F1, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
          Length = 470

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 162/301 (53%), Gaps = 12/301 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID ++ +    +  + + +  P  +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLNEKI-DSSVRRDPIHRRQPNFDELSTEVEILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  + 
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVIN 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I 
Sbjct: 325 TTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVAREVQSTLQKYRELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|170729216|ref|YP_001763242.1| F0F1 ATP synthase subunit beta [Shewanella woodyi ATCC 51908]
 gi|226740675|sp|B1KQ34|ATPB_SHEWM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169814563|gb|ACA89147.1| ATP synthase F1, beta subunit [Shewanella woodyi ATCC 51908]
          Length = 458

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 14/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+P+D    +G+ +  + I  + P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGQPVDEAGEIGEEERYV-IHREAPSYEDQSNTTELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNL 214
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F   +ED     L
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SGVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSALLG 258

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R++A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 317 TVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 376

Query: 394 G 394
           G
Sbjct: 377 G 377


>gi|38906097|gb|AAR27801.1| ATP synthase beta chain [Bifidobacterium catenulatum]
          Length = 373

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                +  + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYECANRVKAILQRNKELQDIIALIG 326


>gi|195953395|ref|YP_002121685.1| F0F1 ATP synthase subunit beta [Hydrogenobaculum sp. Y04AAS1]
 gi|195933007|gb|ACG57707.1| ATP synthase F1, beta subunit [Hydrogenobaculum sp. Y04AAS1]
          Length = 470

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 175/328 (53%), Gaps = 18/328 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N +G+PID    +   D     M + PP +  Q  + +  +TGI+VID+  P   
Sbjct: 94  LGRVFNVVGQPIDEAGDVKATD--HWPMFRDPPPLTEQSTKVEILETGIKVIDLLEPYVK 151

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDC-FDK---VIISLVGERGREVREFIEDYLGDN--L 214
           G ++G+F G+G+GK+ L+     +   F K   V+I  VGER RE  +   + + D+  L
Sbjct: 152 GGKVGLFGGAGVGKTVLMQELIHNIAKFHKGYSVVIG-VGERTREGNDLWHE-MKDSGVL 209

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
             +V+V    +E P +R     T +T+AEYF   +G +VL  +D+I RF  +  E++T  
Sbjct: 210 PYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRDIQGQDVLTFIDNIFRFVQAGSEVSTLL 269

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G LP A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   S+ + LD
Sbjct: 270 GRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSITSVQAVYVPADDITDPAPYSIFAHLD 327

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL R L E G YP +DPL S S+ LA +    +   +   +  ++ R++E ++I  I
Sbjct: 328 ATTVLARRLTELGIYPAIDPLESTSKYLAPEFVGQEHYSVAMEVKRILQRYKELQEIIAI 387

Query: 393 GGYRPGVDLILDKA-VHQVPIIYDFLKQ 419
            G     D   DKA V++   I  FL Q
Sbjct: 388 LGMEELSD--EDKAIVNRARRIQKFLSQ 413


>gi|183206492|gb|ACC54444.1| ATP synthase beta subunit [Campanula saxatilis]
          Length = 498

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++     +     
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKDSGVINEQK 226

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 227 FAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 ITILG 409


>gi|221135161|ref|ZP_03561464.1| F0F1 ATP synthase subunit beta [Glaciecola sp. HTCC2999]
          Length = 460

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +  M I  + P    +    +  +TGI+VID+  P   G
Sbjct: 86  LGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYEEQSSSVELLETGIKVIDLVCPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E       +   + R++E +DI  I G
Sbjct: 323 LSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTAQGVQTTLQRYKELKDIIAILG 380


>gi|112791366|gb|ABI21953.1| ATP synthase beta subunit [Dickeya paradisiaca]
          Length = 421

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG P+D    +G+ +    I    P   +    ++  +TGI+VID+  P  
Sbjct: 58  ATLGRIMNVLGDPVDMKGPIGEEE-RWSIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 116

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 294

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 295 VTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354


>gi|251791748|ref|YP_003006469.1| F0F1 ATP synthase subunit beta [Dickeya zeae Ech1591]
 gi|247540369|gb|ACT08990.1| ATP synthase F1, beta subunit [Dickeya zeae Ech1591]
          Length = 460

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|162447826|ref|YP_001620958.1| V-type ATP synthase subunit B [Acholeplasma laidlawii PG-8A]
 gi|161985933|gb|ABX81582.1| V-type H+-transporting ATPase subunit B [Acholeplasma laidlawii
           PG-8A]
          Length = 459

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D  +V +     G +I     VF      +  S    GR+ + +G+P DG  
Sbjct: 43  GRVLEIDQDKALVQLFESSQGLKIEDAKAVFLGHGLELDLSPLILGRIFSGMGEPKDGKG 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   ++ M+I       + R    +  +TG+  ID    L  GQ++ +F+GSG+  + L
Sbjct: 103 KIIP-EMKMDINGIPLNPVARDYPSEFIQTGVSSIDGLNTLVRGQKLPIFSGSGLPHNKL 161

Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +M AR       +D F  V+ + +G    E   FIE++     + ++V+ V  +++  +
Sbjct: 162 AAMIARNAKVVGTTDNF-AVVFAAIGITFEESNFFIEEFKKSGAIDRTVMFVNLANDPAV 220

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY + + D +VL+I+  IT +A S+REI+    E+P  RGYP  +++
Sbjct: 221 ERIATPRMAITAAEYLAYELDMHVLIIMTDITNYAESLREISAARKEVPGRRGYPGYMYT 280

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G  + +KG+IT +  + +  D+   PI D    I +G ++L+RSL ++G  
Sbjct: 281 DLSSLYERAGRVKGKKGSITQLPILTMPEDDKTHPIPDLTGYITEGQVILSRSLHQKGIQ 340

Query: 349 PPVDPLASVSRLADKA 364
           PPVD L S+SRL DK 
Sbjct: 341 PPVDVLPSLSRLKDKG 356


>gi|75908515|ref|YP_322811.1| F0F1 ATP synthase subunit beta [Anabaena variabilis ATCC 29413]
 gi|118573506|sp|Q3MAS0|ATPB_ANAVT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|75702240|gb|ABA21916.1| ATP synthase F1 subcomplex beta subunit [Anabaena variabilis ATCC
           29413]
          Length = 482

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I    P     +     F+TGI+V+D+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  +  
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL +S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 KDNLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++ +L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +       DE      ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|284931521|gb|ADC31459.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str. F]
          Length = 471

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+PID    +      M I    P   ++    + F+TGI+VID+  P   G
Sbjct: 90  LGRMFNVIGEPIDEKKPIDASVKRMSIHRPAPSFADQSNELEIFETGIKVIDLLIPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E   G  + K+
Sbjct: 150 GKIGLFGGAGVGKTVLVQELIHNIATGHGGLSVFAGVGERTREGNDLYYEMIEGGVIDKT 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 210 ALVFGQMNEPPGARMRVALTGLTMAEYFRDVNNQDVLLFIDNIFRFTQAGSEVSALLGRM 269

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 270 PSAVGYQPTLAEEMGSLQERI--TSTKSGSITSVQAIYVPADDLTDPAPSTTFTHLDAKT 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G +P V+PL S SRL D +       +    +  ++ +F E +DI  I G
Sbjct: 328 VLDRNVASLGIFPAVNPLDSTSRLLDPSVVGIQHYQTARKVQMILQKFLELQDIIAILG 386


>gi|156839682|ref|XP_001643529.1| hypothetical protein Kpol_1008p8 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114144|gb|EDO15671.1| hypothetical protein Kpol_1008p8 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 504

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 167/311 (53%), Gaps = 28/311 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G ++ ++   +   PP+   Q  E +  +TGI+V+D+  P
Sbjct: 118 LGRIINVIGEPIDE-----RGPINSKLRKPIHAEPPSFVEQSTEAEVLETGIKVVDLLAP 172

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207
              G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  
Sbjct: 173 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETG 231

Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
             +  GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 232 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQ 289

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP 
Sbjct: 290 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPA 347

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRF 383
             +  + LD   VL+R ++E G YP VDPL S SRL D A    E   V++ +   +  +
Sbjct: 348 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATRVQETLQAY 407

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 408 KSLQDIIAILG 418


>gi|92116150|ref|YP_575879.1| F0F1 ATP synthase subunit beta [Nitrobacter hamburgensis X14]
 gi|118573706|sp|Q1QQS8|ATPB_NITHX RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91799044|gb|ABE61419.1| ATP synthase F1 subcomplex beta subunit [Nitrobacter hamburgensis
           X14]
          Length = 476

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +   D+   I  + P   ++    +   TGI+V+D+  P   G 
Sbjct: 90  GRIMNVIGEPVDEQGPVKAEDMRA-IHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211
           +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +    G
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    L+ +T+AE+F  +G +VL  +D+I RF  +  E++ 
Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +++  L ERI  +   KG+IT++ ++ V  D+  DP   +  + 
Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSIQAIYVPADDLTDPAPATSFAH 326

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390
           LD    LNR+++E+G YP VDPL S SR+       +E    + +   ++ R++  +DI 
Sbjct: 327 LDATTTLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQRYKSLQDII 386

Query: 391 LIGG 394
            I G
Sbjct: 387 AILG 390


>gi|285019666|ref|YP_003377377.1| ATP synthase subunit beta [Xanthomonas albilineans GPE PC73]
 gi|283474884|emb|CBA17383.1| probable atp synthase , beta subunit protein [Xanthomonas
           albilineans]
          Length = 468

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGEVQATD-HWEIHRAAPTYEDQSSATELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VL+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPNVIGHEHYDTARRVQSTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|212715311|ref|ZP_03323439.1| hypothetical protein BIFCAT_00204 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661768|gb|EEB22343.1| hypothetical protein BIFCAT_00204 [Bifidobacterium catenulatum DSM
           16992]
          Length = 493

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 140 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 199

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 200 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 259

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 260 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 317

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 318 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 377

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                +  + +  ++ R +E +D I LIG
Sbjct: 378 GQAHYECANRVKAILQRNKELQDIIALIG 406


>gi|325963826|ref|YP_004241732.1| ATP synthase, F1 subunit beta [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323469913|gb|ADX73598.1| ATP synthase, F1 beta subunit [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 484

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG+P+D  +S  +      I  K P   + +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHIFNVLGQPLDVAESELEISERWPIHRKAPSFASLEGSTEMLETGIKVIDLLTPYIKGG 162

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR+ D  +   D       +  ++ + +E +DI  I G
Sbjct: 341 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 398


>gi|307133303|ref|YP_003885319.1| F1 sector of membrane-bound ATP synthase, subunit beta [Dickeya
           dadantii 3937]
 gi|306530832|gb|ADN00763.1| F1 sector of membrane-bound ATP synthase, beta subunit [Dickeya
           dadantii 3937]
          Length = 460

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|306992006|pdb|3OEH|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992007|pdb|3OEH|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992008|pdb|3OEH|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992015|pdb|3OEH|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992016|pdb|3OEH|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992017|pdb|3OEH|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992024|pdb|3OEH|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992025|pdb|3OEH|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992026|pdb|3OEH|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
          Length = 484

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 98  LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 156

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 157 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 214

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 215 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 274

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 275 SALLGRIPSAFGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 332

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 333 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 392

Query: 389 IRLIGG 394
           I  I G
Sbjct: 393 IIAILG 398


>gi|198285477|gb|ACH85277.1| ATP synthase H+ transporting mitochondrial F1 complex beta [Salmo
           salar]
          Length = 495

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P   +    ++   TGI+V+
Sbjct: 99  IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAAIHAEAPEFTDMSVEQEILVTGIKVV 157

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 158 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 216

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 217 MIESGVINLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 276

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 277 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 334

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 335 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 394

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 395 LQDYKSLQDIIAILG 409


>gi|89574029|gb|ABD77240.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Homo sapiens]
          Length = 445

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 77  LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 135

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372

Query: 389 IRLIGG 394
           I  I G
Sbjct: 373 IIAILG 378


>gi|142006|gb|AAA21993.1| ATPase beta-subunit [Anabaena sp.]
          Length = 471

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 155/300 (51%), Gaps = 11/300 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I    P     +     F+TGI+V+D+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK 216
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE  +   + +     K
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMID---SK 210

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 211 NALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGR 270

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++ +L ERI  +   +G+IT++ +V V  D+  DP   +  + LDG 
Sbjct: 271 MPSAVGYQPTLGTDVGQLQERI--TSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDGT 328

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R LA +G YP VDPL S S +       DE      ++   + R++E +DI  I G
Sbjct: 329 TVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKELQDIIAILG 388


>gi|260551344|ref|ZP_05825545.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624]
 gi|260405658|gb|EEW99149.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624]
          Length = 464

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  ++ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|240127359|ref|ZP_04740020.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
 gi|268685732|ref|ZP_06152594.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
 gi|268626016|gb|EEZ58416.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
          Length = 465

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPIDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++      + S VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     G+D + D+   AV +   I  FL Q
Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407


>gi|239637396|ref|ZP_04678378.1| ATP synthase F1, beta subunit [Staphylococcus warneri L37603]
 gi|239596996|gb|EEQ79511.1| ATP synthase F1, beta subunit [Staphylococcus warneri L37603]
 gi|330684792|gb|EGG96485.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU121]
          Length = 470

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 162/301 (53%), Gaps = 12/301 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+ ID ++ +    +  + + +  P  +    E +  +TGI+V+D+  P   
Sbjct: 89  LGRVFNVLGETIDLEEKIDDS-VRRDPIHRQSPGFDELSTEVEILETGIKVVDLLAPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215
           G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  +K
Sbjct: 148 GGKVGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVIK 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDS 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L R L E G YP VDPLAS SR  + +    E  ++   +   + ++ E +DI  I 
Sbjct: 325 TTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARGVQSTLQKYRELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|34447120|dbj|BAC84975.1| mitochondrial ATPase beta-subunit [Zygosaccharomyces rouxii]
          Length = 506

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 182/353 (51%), Gaps = 30/353 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +   +    I ++ P  +++    +  +TGI+V+D+  P   G
Sbjct: 120 LGRIINVIGEPIDEAGPINTKE-RRPIHAEPPSFVDQSTNSEVLETGIKVVDLLAPYARG 178

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE +E    D 
Sbjct: 179 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMMETGVIDL 237

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 238 KGDS--KVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 295

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A  Y  ++ +++  L ERI  ++K  G++T+V +V V  D+  DP   + 
Sbjct: 296 VSALLGRIPSAVAYQPTLSTDMGALQERIATTQK--GSVTSVQAVYVPADDLTDPAPATT 353

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +   +E   + S +   +  ++  +
Sbjct: 354 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGEEHYNIASDVQMTLQAYKSLQ 413

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           DI  I     G+D + ++    V +   I  FL Q     ++  VF  I  KL
Sbjct: 414 DIIAI----LGMDELSEQDKLTVERARKIQRFLSQP---FATAQVFTGIEGKL 459


>gi|269118842|ref|YP_003307019.1| ATP synthase F1 subunit beta [Sebaldella termitidis ATCC 33386]
 gi|268612720|gb|ACZ07088.1| ATP synthase F1, beta subunit [Sebaldella termitidis ATCC 33386]
          Length = 465

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D   ++ K +    I  + P    +    +  +TGI+V+D+  P   G
Sbjct: 86  LGRIFNVLGEVVDKGPAV-KTEEYHSIHREAPSFEEQGTGTEILETGIKVVDLLAPYLKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE R+   +      + K+
Sbjct: 145 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMKESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            ++    +E P  R    LTA+T+AEYF  + G +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALIYGQMNEPPGARLRVGLTALTMAEYFRDREGQDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD   
Sbjct: 265 PSAVGYQPNLATEMGTLQERI--TSTKKGSITSVQAVYVPADDFTDPAPATTFSHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS++  G YP VDPL S SR L  +    +       +  L+ R++E +DI  I G
Sbjct: 323 VLSRSISSLGIYPAVDPLESTSRILEPEIVGVEHYNTAREVQRLLQRYKELQDIIAILG 381


>gi|126436438|ref|YP_001072129.1| F0F1 ATP synthase subunit beta [Mycobacterium sp. JLS]
 gi|190358684|sp|A3Q3B1|ATPB_MYCSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|126236238|gb|ABN99638.1| ATP synthase F1, beta subunit [Mycobacterium sp. JLS]
          Length = 517

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG  +D D   GK D     + + PPA +    R E   +TG++V+D+ TP   
Sbjct: 103 GHVFNALGACLD-DPGYGK-DFEKWSIHRKPPAFDELEPRTEM-LETGLKVVDLLTPYVR 159

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK 
Sbjct: 160 GGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKD 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   K  +VLL +D+I RF  +  E++T  G 
Sbjct: 220 TALVFGQMDEPPGTRMRVALSALTMAEYFRDEKQQDVLLFIDNIFRFTQAGSEVSTLLGR 279

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD  
Sbjct: 280 MPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDAT 337

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+RS+  +G +P VDPLAS S + D +   DE  ++   +  ++ R+++ +DI  I G
Sbjct: 338 TELSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 397


>gi|145218847|ref|YP_001129556.1| F0F1 ATP synthase subunit beta [Prosthecochloris vibrioformis DSM
           265]
 gi|189081338|sp|A4SC45|ATPB_PROVI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145205011|gb|ABP36054.1| ATP synthase F1 subcomplex beta subunit [Chlorobium phaeovibrioides
           DSM 265]
          Length = 462

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PIDG   +     +  I    P   +     + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGDPIDGRGPV-DAKKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +    + + VGER RE  +   + +    + K+
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT ++IAEYF  + + +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI  +  + G++T+V ++ V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     D+      ++  ++ R+++ +DI  I G
Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKMILQRYKDLQDIIAILG 381


>gi|257064827|ref|YP_003144499.1| ATP synthase, F1 beta subunit [Slackia heliotrinireducens DSM
           20476]
 gi|256792480|gb|ACV23150.1| ATP synthase, F1 beta subunit [Slackia heliotrinireducens DSM
           20476]
          Length = 485

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 156/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+P+D +  + +    M I    P         + F+TGI+ ID+  P   G 
Sbjct: 106 GRIWNVIGEPVD-EKPMPEVAGYMPIHRPAPEYDTLSTKTEIFETGIKAIDLIEPFIRGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ ++     +   +     + + VGER RE  + ++E      + K+ 
Sbjct: 165 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSESGVINKTC 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 225 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFVDNIFRFTQAGSEVSALLGRMPS 284

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 285 AVGYQPTLATEMGDLQERI--TSTSAGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 342

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +RS+AE G YP VDPL S SR  + A   +E  ++ + +  L+  +++ +DI  I G
Sbjct: 343 SRSIAELGIYPAVDPLESTSRALEPAIVGEEHYRVATGIQELLQNYKDLQDIIAILG 399


>gi|34500000|gb|AAQ73582.1| ATP synthase beta subunit [Mannheimia haemolytica]
          Length = 444

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +       +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTXLLETGIKVIDLVAPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|212703958|ref|ZP_03312086.1| hypothetical protein DESPIG_02011 [Desulfovibrio piger ATCC 29098]
 gi|212672661|gb|EEB33144.1| hypothetical protein DESPIG_02011 [Desulfovibrio piger ATCC 29098]
          Length = 473

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR++N +G+P+D    +G    +    I    P    +    +  +TGI+V+D+  P
Sbjct: 89  AAVGRILNVIGRPVD---EMGPVNAEKYYPIHRPAPEFTEQNTKVELLETGIKVVDLLVP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL-GD 212
              G ++G+F G+G+GK+ +L    +  A+      V    VGER RE  +   +     
Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFAG-VGERTREGNDLYNELKEAG 204

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            L+++ +V    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++ 
Sbjct: 205 VLERATLVYGQMNEPPGARARVALTALACAEYFRDEENQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 265 LLGRMPSAVGYQPTLGTDLGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIR 390
           LDG +VL+R +AE G YP VDPL S SR+ D     +E   V+    ++  +++E +DI 
Sbjct: 323 LDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHYSVARQVQMVLQKYKELQDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|319760158|ref|YP_004124096.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF]
 gi|318038872|gb|ADV33422.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF]
          Length = 467

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 155/297 (52%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID   S+ K      I    P        ++   TGI+VID+  P   G 
Sbjct: 93  GRIMNVLGEPIDKKGSI-KTIERRSIHQFSPLYHELSTNQELLVTGIKVIDLMCPFIKGG 151

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKSV 218
           +IG+F G+G+GK+  +    R+   +    S+   VGER RE  +F  + +  D + K  
Sbjct: 152 KIGLFGGAGVGKTVNIMELIRNIAVEHSGYSVFVGVGERTREGNDFYHEMIHSDIINKVA 211

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +TIAE F   G NVLL +D+I R+  +  E++   G +P 
Sbjct: 212 LVYGQMNEPPGNRFRVALTGLTIAEKFRDDGYNVLLFIDNIYRYTLAGTEVSALLGRVPS 271

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY +++  E+  L ERI  +  + G IT+V ++ V  D+  DP   +  + LD  IVL
Sbjct: 272 AVGYQSTLSEEMGMLQERIAST--KSGAITSVQAIYVPADDLTDPSPTTTFAHLDATIVL 329

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S S+  D      E   + +++  ++ R++E +DI  I G
Sbjct: 330 SRQIAALGIYPAVDPLDSHSQQLDPFIVGQEHYDVANAVRSILQRYQELKDIIAILG 386


>gi|242241387|ref|YP_002989568.1| F0F1 ATP synthase subunit beta [Dickeya dadantii Ech703]
 gi|242133444|gb|ACS87746.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech703]
          Length = 460

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG P+D    +G+ +    I    P   +    ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGDPVDMKGPIGEEE-RWSIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379


>gi|311070200|ref|YP_003975123.1| F0F1 ATP synthase subunit beta [Bacillus atrophaeus 1942]
 gi|310870717|gb|ADP34192.1| F0F1 ATP synthase subunit beta [Bacillus atrophaeus 1942]
          Length = 473

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+ ID ++ L   +   + + +  P+ ++   E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGENIDLNEPLA-ANTEKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AE+F   +G +VL  +D+I RF  +  E++   
Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDVQGQDVLFFIDNIYRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR LA +    +   +   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|255965392|gb|ACU45001.1| ATP synthase beta [Pfiesteria piscicida]
          Length = 427

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 153/308 (49%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+IN +G+PID    LG  D      I    P         +   TGI+V+D+  P  
Sbjct: 37  LGRIINIIGEPID---ELGPIDTKKYYAIHRPTPTFTEMNTTAQQLLTGIKVVDLLAPYA 93

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ ++     +         + + VGER RE  +   + +   +  
Sbjct: 94  KGGKIGLFGGAGVGKTVVIMELIHNIALKHGGYSVFAGVGERTREGNDLYHEMMASGVIK 153

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  
Sbjct: 154 KDKAPGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDEEGQDVLLFVDNIFRFTQAGS 213

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 214 EVSALLGRIPSAVGYQPTLATDLASLQERI--TTTQKGSITSVQAVYVPADDLTDPAPAT 271

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +AE G YP VDPL S SR+ D +        +  S   ++  ++  
Sbjct: 272 TFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDASIVGQRHYDIARSTQKILQDYKSL 331

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 332 QDIIAILG 339


>gi|239817829|ref|YP_002946739.1| F0F1 ATP synthase subunit beta [Variovorax paradoxus S110]
 gi|239804406|gb|ACS21473.1| ATP synthase F1, beta subunit [Variovorax paradoxus S110]
          Length = 466

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%)

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+++ LG+PID  GD S    DL+  I  K P        +   +TGI+VID+  P
Sbjct: 81  ATLGRIMDVLGRPIDERGDVSQ---DLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCP 137

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212
              G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +     
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSG 196

Query: 213 --NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
             NL+K       +V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +
Sbjct: 197 VVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 257 GTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD  +VL+R +A  G YP VDPL S SR  D     +E   V+ ++   + R++
Sbjct: 315 ATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQRYK 374

Query: 385 ETRDIRLIGG 394
           E RDI  I G
Sbjct: 375 ELRDIIAILG 384


>gi|218135023|ref|ZP_03463827.1| hypothetical protein BACPEC_02928 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990408|gb|EEC56419.1| hypothetical protein BACPEC_02928 [Bacteroides pectinophilus ATCC
           43243]
          Length = 465

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N LG  IDG + L   D +   + + PP    Q  V +  +TGI+VID+  P   G
Sbjct: 87  GRLFNVLGDTIDGGEKLD--DETHWSIHREPPTFEDQSPVVEMLETGIKVIDLLAPYAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+     +   ++    I + VGER RE  + + E      L K+
Sbjct: 145 GKIGLFGGAGVGKTVLIQELIHNIATERGGYSIFTGVGERSREGNDLWTEMKESGVLDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVKHQDVLLFIDNIFRFVQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLANDVGELQERIASTKD--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ +     +E   V+  +  ++ +++E +DI  I G
Sbjct: 323 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYNVARRVQAILQKYKELQDIIAILG 381


>gi|195019846|ref|XP_001985067.1| GH16852 [Drosophila grimshawi]
 gi|193898549|gb|EDV97415.1| GH16852 [Drosophila grimshawi]
          Length = 659

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 166/318 (52%), Gaps = 25/318 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGI 149
           R++      GR++N +G PID      +G++  E  S +   PP +    V+ +   TGI
Sbjct: 195 RVAVGKSVLGRIVNVVGDPIDE-----RGEIKSEFYSFIHNEPPDLQELSVKPEVLVTGI 249

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE---- 201
           +VID+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE    
Sbjct: 250 KVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDL 308

Query: 202 VREFIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILD 257
             E IE     L D+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D
Sbjct: 309 YYEMIESKVISLDDDTSKVALVYGQMNEPPGARNRVVLTGLTIAEYFRDIEGQDVLLFID 368

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  E++   G +P A GY  ++ +++  + ERI  S  + G+IT+V +V V  
Sbjct: 369 NIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGAMQERI--SSTKNGSITSVQAVYVPA 426

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSL 376
           D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D +    D   +  ++
Sbjct: 427 DDLSDPAPSATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRVLDPEVVGEDHYNVARAV 486

Query: 377 THLIHRFEETRDIRLIGG 394
              +  ++  +DI  I G
Sbjct: 487 QKTLQGYKSLQDIIAILG 504


>gi|303244849|ref|ZP_07331177.1| H(+)-transporting two-sector ATPase [Methanothermococcus
           okinawensis IH1]
 gi|302484799|gb|EFL47735.1| H(+)-transporting two-sector ATPase [Methanothermococcus
           okinawensis IH1]
          Length = 462

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 25/314 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           +I  S    GR+ N  GKPIDG   +    K D++   ++ V    +R+      +TGI 
Sbjct: 83  KIGVSPEMLGRIFNGAGKPIDGGPEIIPEKKLDINGYPLNPV----SRRNPNDFVQTGIS 138

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVR 203
            ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+ + +G    E  
Sbjct: 139 TIDGTNTLVRGQKLPIFSGSGLPHNLLAAQIARQAKVRGEGEQF-AVVFAAMGITAEEAN 197

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITR 261
            F+E++     L+K+VV +  +D+  I R + P  A+T AEY +  KG +VL+IL  IT 
Sbjct: 198 YFMEEFKRTGALEKAVVYINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDITN 257

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +  ++REIA    E+P  RGYP  ++++L  L ER G  +  +G +T +  + +  D+  
Sbjct: 258 YCEALREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGREGTVTQIPILTMPHDDIT 317

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376
            PI D    I +G IVL+R L  +G YPPVD L S+SRLA           D  K++S  
Sbjct: 318 HPIPDLTGYITEGQIVLSRELNRKGIYPPVDVLPSLSRLAGNGQGEGKTREDHSKVIS-- 375

Query: 377 THLIHRFEETRDIR 390
             +   + E R +R
Sbjct: 376 -QVYAAYAEGRSLR 388


>gi|167626199|ref|YP_001676493.1| F0F1 ATP synthase subunit beta [Shewanella halifaxensis HAW-EB4]
 gi|189081345|sp|B0TQF4|ATPB_SHEHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167356221|gb|ABZ78834.1| ATP synthase F1, beta subunit [Shewanella halifaxensis HAW-EB4]
          Length = 458

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 162/303 (53%), Gaps = 12/303 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           +   GR++N LG PID    +G+ +  + I  + P   ++    +  +TGI+VID+  P 
Sbjct: 80  SATLGRIMNVLGDPIDECGEIGEQERYV-IHREAPSYEDQSSSTELLETGIKVIDLVCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  + + D+ 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYE-MKDSG 196

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++  
Sbjct: 197 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSAL 256

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + L
Sbjct: 257 LGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHL 314

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D  +VL+R++A  G YP VDPL S SR  D      E   + S +  ++ R++E +DI  
Sbjct: 315 DATVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVASGVQTVLQRYKELKDIIA 374

Query: 392 IGG 394
           I G
Sbjct: 375 ILG 377


>gi|146185860|ref|XP_001032631.2| ATP synthase beta chain, mitochondrial precursor, putative
           [Tetrahymena thermophila]
 gi|146142891|gb|EAR84968.2| ATP synthase beta chain, mitochondrial precursor, putative
           [Tetrahymena thermophila SB210]
          Length = 497

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +    L   I    P   ++    +   TGI+V+D+  P   G 
Sbjct: 111 GRIMNVIGEPIDQRGPIKAAKL-YPIHRDAPSFTDQATSAEILVTGIKVVDLLAPYARGG 169

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +   +     
Sbjct: 170 KIGLFGGAGVGKTVLIQELINNVAKHHGGYSVFAGVGERTREGNDLYHEMMDSKVISVKE 229

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              +  ++    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 230 GESRCALIFGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFVDNIFRFTQACSEVSA 289

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 290 LLGRIPSAVGYQPTLATDLGALQERI--TTTQKGSITSVQAIYVPADDLTDPAPATTFAH 347

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD   VLNR L E G YP VDPL S SR+ D     +E   V+  +  L+  ++  +DI 
Sbjct: 348 LDATTVLNRGLTELGIYPAVDPLDSTSRMLDPITIGEEHYTVARGVQKLLQDYKSLQDII 407

Query: 391 LIGG 394
            I G
Sbjct: 408 AILG 411


>gi|146284502|ref|YP_001174655.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri A1501]
 gi|166201728|sp|A4VS62|ATPB_PSEU5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145572707|gb|ABP81813.1| ATP synthase beta chain [Pseudomonas stutzeri A1501]
 gi|327482891|gb|AEA86201.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri DSM 4166]
          Length = 458

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEAGPIGEEE-RWTIHRAAPSYSEQAGGNELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI  I G
Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377


>gi|80091|pir||S17726 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           Bacillus firmus (strain OF4)
          Length = 469

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 169/330 (51%), Gaps = 15/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID  + +        I  + P         +  +TGI+V+D+  P  
Sbjct: 89  ATLGRVFNVLGEAIDLGEPVAADVKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +  +IS+   VGER RE  +   +      +K
Sbjct: 149 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIK 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+ +T+AE+F  + G +VLL +D+I RF  +  E++   G
Sbjct: 209 KTAMVFGQMNEPPGARMRVALSGLTMAEHFRDRDGQDVLLFVDNIFRFTQAGSEVSALLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  + G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 269 RMPSAVGYQPTLATEMGHLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + +++E +DI  I 
Sbjct: 327 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 385

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + ++    VH+   I  FL Q+
Sbjct: 386 ---LGMDELSEEDKLVVHRARRIQFFLSQN 412


>gi|224510811|pdb|3FKS|D Chain D, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510812|pdb|3FKS|E Chain E, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510813|pdb|3FKS|F Chain F, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510820|pdb|3FKS|M Chain M, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510821|pdb|3FKS|N Chain N, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510822|pdb|3FKS|O Chain O, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510829|pdb|3FKS|V Chain V, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510830|pdb|3FKS|W Chain W, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510831|pdb|3FKS|X Chain X, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|306991952|pdb|3OE7|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991953|pdb|3OE7|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991954|pdb|3OE7|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991961|pdb|3OE7|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991962|pdb|3OE7|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991963|pdb|3OE7|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991970|pdb|3OE7|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991971|pdb|3OE7|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991972|pdb|3OE7|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991979|pdb|3OEE|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991980|pdb|3OEE|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991981|pdb|3OEE|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991988|pdb|3OEE|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991989|pdb|3OEE|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991990|pdb|3OEE|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991997|pdb|3OEE|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991998|pdb|3OEE|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991999|pdb|3OEE|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306992033|pdb|3OFN|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992034|pdb|3OFN|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992035|pdb|3OFN|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992042|pdb|3OFN|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992043|pdb|3OFN|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992044|pdb|3OFN|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992051|pdb|3OFN|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992052|pdb|3OFN|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992053|pdb|3OFN|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
          Length = 484

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 98  LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 156

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 157 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 214

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 215 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 274

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 275 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 332

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 333 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 392

Query: 389 IRLIGG 394
           I  I G
Sbjct: 393 IIAILG 398


>gi|119389907|pdb|2HLD|D Chain D, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389908|pdb|2HLD|E Chain E, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389909|pdb|2HLD|F Chain F, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389916|pdb|2HLD|M Chain M, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389917|pdb|2HLD|N Chain N, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389918|pdb|2HLD|O Chain O, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389925|pdb|2HLD|V Chain V, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389926|pdb|2HLD|W Chain W, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389927|pdb|2HLD|X Chain X, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|300193118|pdb|2WPD|D Chain D, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193119|pdb|2WPD|E Chain E, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193120|pdb|2WPD|F Chain F, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
          Length = 478

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 92  LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 150

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 151 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 208

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 209 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 268

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 269 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 326

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 327 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 386

Query: 389 IRLIGG 394
           I  I G
Sbjct: 387 IIAILG 392


>gi|38906103|gb|AAR27804.1| ATP synthase beta chain [Bifidobacterium dentium]
          Length = 373

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I +      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|15425560|emb|CAC60400.1| ATP synthase beta subunit [Brunonia australis]
          Length = 477

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +N       F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFINLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++     
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 216

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  ++   +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYEIAQQVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|332186743|ref|ZP_08388485.1| ATP synthase F1, beta subunit [Sphingomonas sp. S17]
 gi|332013076|gb|EGI55139.1| ATP synthase F1, beta subunit [Sphingomonas sp. S17]
          Length = 490

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 165/335 (49%), Gaps = 22/335 (6%)

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G + ++       GR++N +G+PID    +   DL   I +K P  + 
Sbjct: 74  EGLTRGQTVTDTGNQIQVPVGPATLGRILNVVGEPIDERGPVAT-DLRAPIHAKAPEFIE 132

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISL 194
           +        TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + 
Sbjct: 133 QSTESAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAG 192

Query: 195 VGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTI 241
           VGER RE  +   ++L   +              K  +V    +E P  R    L+ + I
Sbjct: 193 VGERTREGNDLYHEFLDAGVIAKDAEGNAISEGSKVALVYGQMNEPPGARARVALSGLAI 252

Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF   +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 253 AEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--T 310

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              KG+IT+V +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SR+
Sbjct: 311 STNKGSITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRV 370

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            +      E  +   ++  L+ R++  +DI  I G
Sbjct: 371 LEPRIVGQEHYETARAVQSLLQRYKALQDIIAILG 405


>gi|323304290|gb|EGA58064.1| Atp2p [Saccharomyces cerevisiae FostersB]
          Length = 511

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|219871749|ref|YP_002476124.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
           F(1) subunit beta [Haemophilus parasuis SH0165]
 gi|254808153|sp|B8F774|ATPB_HAEPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219691953|gb|ACL33176.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
           F(1) beta subunit [Haemophilus parasuis SH0165]
          Length = 457

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTELLETGIKVIDLIAPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQKTLQRYKELKDIIAILG 376


>gi|126739852|ref|ZP_01755543.1| F0F1 ATP synthase subunit beta [Roseobacter sp. SK209-2-6]
 gi|126719084|gb|EBA15795.1| F0F1 ATP synthase subunit beta [Roseobacter sp. SK209-2-6]
          Length = 474

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 163/311 (52%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR++N +G+P+D    +   +     + +  P  N Q  E     TGI+VID+  P 
Sbjct: 84  ATLGRILNVVGEPVDEKGPVNATE--TRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVR----EFIEDY 209
             G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  
Sbjct: 142 SKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYWEMIESN 199

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
           +   DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  
Sbjct: 200 VIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRF 383
             +  + LD   VLNR+++E G YP VDPL S SRL D     +E   V+S +  ++ R+
Sbjct: 318 PATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYAVASDVQQILQRY 377

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 378 KSLQDIIAILG 388


>gi|162286755|ref|YP_001083240.2| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ATCC 17978]
 gi|169632167|ref|YP_001705903.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii SDF]
 gi|169797644|ref|YP_001715437.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AYE]
 gi|184156498|ref|YP_001844837.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ACICU]
 gi|213155562|ref|YP_002317607.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB0057]
 gi|215484998|ref|YP_002327239.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294]
 gi|239503042|ref|ZP_04662352.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB900]
 gi|260557587|ref|ZP_05829801.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606]
 gi|301345728|ref|ZP_07226469.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB056]
 gi|301512770|ref|ZP_07238007.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB058]
 gi|301594499|ref|ZP_07239507.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB059]
 gi|332852654|ref|ZP_08434308.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150]
 gi|332869370|ref|ZP_08438748.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113]
 gi|332875632|ref|ZP_08443444.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059]
 gi|190358287|sp|A3M144|ATPB_ACIBT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739963|sp|B7H294|ATPB_ACIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739964|sp|B7I1W4|ATPB_ACIB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739965|sp|B2I102|ATPB_ACIBC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739966|sp|B0VNK4|ATPB_ACIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739967|sp|B0VBP3|ATPB_ACIBY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169150571|emb|CAM88480.1| membrane-bound ATP synthase , F1 sector, beta-subunit
           [Acinetobacter baumannii AYE]
 gi|169150959|emb|CAO99574.1| membrane-bound ATP synthase , F1 sector, beta-subunit
           [Acinetobacter baumannii]
 gi|183208092|gb|ACC55490.1| F0F1-type ATP synthase, beta subunit [Acinetobacter baumannii
           ACICU]
 gi|193076046|gb|ABO10638.2| membrane-bound ATP synthase F1 sector, beta-subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213054722|gb|ACJ39624.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB0057]
 gi|213988424|gb|ACJ58723.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294]
 gi|260408760|gb|EEX02064.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606]
 gi|322506367|gb|ADX01821.1| atpD [Acinetobacter baumannii 1656-2]
 gi|323516235|gb|ADX90616.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332729122|gb|EGJ60469.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150]
 gi|332732788|gb|EGJ64004.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113]
 gi|332736205|gb|EGJ67220.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059]
          Length = 464

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +  + I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR  D      E  ++  ++ +++ R++E +
Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKELK 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|51599165|gb|AAU08241.1| ATP synthase beta subunit [Nonomuraea sp. ATCC 39727]
          Length = 482

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 158/303 (52%), Gaps = 18/303 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG+ +D   S  K +    I    P     +   +   TGI+VID+ TP   G 
Sbjct: 103 GHVWNALGETLDVPTSSLKIEERWGIHRPSPAFDQLESRTELLVTGIKVIDLLTPYVQGG 162

Query: 163 RIGVFAGSGIGKSTLLSM--------FARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213
           +IG+F G+G+GK+ L+          F  + CF     + VGER RE  + ++E    D 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMIRRVARNFGGTSCF-----AGVGERTREGNDLWLEMEEADV 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           LK + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T 
Sbjct: 218 LKDTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDITDPAPHNAFAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRL 391
           D   VL+R ++E+G YP VDPL S SR+ D     +E   V+  T  ++ ++ E +DI  
Sbjct: 336 DAQTVLSRPISEKGIYPAVDPLDSSSRILDPQIVGEEHYRVAQETKRILQKYRELQDIIA 395

Query: 392 IGG 394
           I G
Sbjct: 396 ILG 398


>gi|254569858|ref|XP_002492039.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia pastoris GS115]
 gi|238031836|emb|CAY69759.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia pastoris GS115]
 gi|328351470|emb|CCA37869.1| F-type H+-transporting ATPase subunit beta [Pichia pastoris CBS
           7435]
          Length = 503

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 165/311 (53%), Gaps = 28/311 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  +    I +  P  +N+    +  +TGI+V+D+  P
Sbjct: 117 LGRIINVIGEPIDE-----RGPIECKQRNPIHADPPSFVNQSTAAEVLETGIKVVDLLAP 171

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207
              G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  
Sbjct: 172 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETG 230

Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
             +  GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 231 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQ 288

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP 
Sbjct: 289 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTQKGSVTSVQAVYVPADDLTDPA 346

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R ++E G YP VDPL S SRL D A    E  ++ + +   +  +
Sbjct: 347 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYEVATQVQQTLQAY 406

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 407 KSLQDIIAILG 417


>gi|225175830|ref|ZP_03729823.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Dethiobacter alkaliphilus AHT 1]
 gi|225168754|gb|EEG77555.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Dethiobacter alkaliphilus AHT 1]
          Length = 459

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 162/316 (51%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           G+V+ +N D  +V I     G  ++   + F      +  S    GRV + LG+P D G 
Sbjct: 42  GRVLEVNRDKALVQIFEGSSGMNVNQSKVRFLGKGIELPVSMDMLGRVFDGLGRPRDNGP 101

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + +  L +  +   P A N     +  +TG+  ID    L  GQ++ +F+GSG+  + 
Sbjct: 102 KIIPEDRLDINGLPLNPYARNYP--SEFIQTGVSTIDGLNTLVRGQKLPIFSGSGLPHNR 159

Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR      +D    ++ + +G    E   FI D+     + +SV+ +  +D+  I
Sbjct: 160 LAAQIARQAKVLGTDAKFALVFAAMGITFEEADFFISDFRKTGAIDRSVLFINLADDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+I+  IT +A ++REI+    E+P  RGYP  +++
Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDITNYAEALREISAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G     +G+IT +  + +  D+   PI D    I +G I+LNRSL  +G Y
Sbjct: 280 DLATLYERAGRIRDREGSITQIPILTMPEDDKTHPIPDLTGYITEGQIMLNRSLNRKGIY 339

Query: 349 PPVDPLASVSRLADKA 364
           PPVD L S+SRL DK 
Sbjct: 340 PPVDVLPSLSRLKDKG 355


>gi|306922408|ref|NP_001182454.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Equus caballus]
          Length = 528

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E  ++   +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|259147584|emb|CAY80835.1| Atp2p [Saccharomyces cerevisiae EC1118]
          Length = 511

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|83313238|ref|YP_423502.1| F0F1 ATP synthase subunit beta [Magnetospirillum magneticum AMB-1]
 gi|118573694|sp|Q2VZN2|ATPB_MAGSA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|82948079|dbj|BAE52943.1| F0F1-type ATP synthase, beta subunit [Magnetospirillum magneticum
           AMB-1]
          Length = 474

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +G    ++ I +  P  +++    +   TGI+VID+  P C G 
Sbjct: 88  GRIINVIGEPIDERGPIGN-KTTLPIHADAPEFVDQSTETEILVTGIKVIDLLAPYCKGG 146

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+  G+G+GK+ L+    +  A++     V    VGER RE  +   + +   +    
Sbjct: 147 KIGLCGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIKLD 205

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  +  E++
Sbjct: 206 GPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDVEGQDVLFFVDNIFRFTQAGSEVS 265

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 266 ALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATSFA 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VLNR +AE G YP VDPL S SR+ D +    D  +    +  ++  ++  +DI
Sbjct: 324 HLDATTVLNRQIAELGIYPAVDPLDSTSRVLDPRVVGNDHYQTARDVQRILQTYKSLQDI 383

Query: 390 RLIGG 394
             I G
Sbjct: 384 IAILG 388


>gi|237756387|ref|ZP_04584932.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691452|gb|EEP60515.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 474

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+PID    +   +    I  + P    +    + F+TGI+VID+  PL  G
Sbjct: 94  LGRIFNVVGQPIDEAGPV-NAEEYWPIFREAPSFEEQSTKVEQFETGIKVIDLLVPLIKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
            ++G+F G+G+GK+ L+       A+      V++  VGER RE  + ++E      L  
Sbjct: 153 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 211

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P +R     T +T+AEYF   +  +VL+ +D+I RF  +  E++T  G 
Sbjct: 212 TAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGR 271

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP A GY  ++ +++  + ERI  ++   G+IT++ +V V  D+  DP   S+ + LD  
Sbjct: 272 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 329

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394
           IVL R L E G YP +DPL S SR     +  +E   V+  T  ++ R++E ++I  I G
Sbjct: 330 IVLQRRLTELGIYPAIDPLESTSRALAPEYIGEEHYYVARETQRILQRYKELQEIIAILG 389


>gi|188997519|ref|YP_001931770.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932586|gb|ACD67216.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 474

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+PID    +   +    I  + P    +    + F+TGI+VID+  PL  G
Sbjct: 94  LGRIFNVVGQPIDEAGPV-NAEEYWPIFREAPSFEEQSTKVEQFETGIKVIDLLVPLIKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
            ++G+F G+G+GK+ L+       A+      V++  VGER RE  + ++E      L  
Sbjct: 153 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 211

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P +R     T +T+AEYF   +  +VL+ +D+I RF  +  E++T  G 
Sbjct: 212 TAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGR 271

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP A GY  ++ +++  + ERI  ++   G+IT++ +V V  D+  DP   S+ + LD  
Sbjct: 272 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 329

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394
           IVL R L E G YP +DPL S SR     +  +E   V+  T  ++ R++E ++I  I G
Sbjct: 330 IVLQRRLTELGIYPAIDPLESTSRALAPEYIGEEHYYVARETQRILQRYKELQEIIAILG 389


>gi|46909267|gb|AAT06151.1| ATP synthase beta subunit [Ptychodera flava]
          Length = 427

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 19/316 (6%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R  I P     GR++N +G+PID    +        I  + P  +     ++   TGI+V
Sbjct: 56  RIPIGPETL--GRIMNVIGEPIDERGPIVTAS-KAGIHQEAPEFVEMNLTQEILVTGIKV 112

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203
           +D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      
Sbjct: 113 VDLLAPYAKGGKIGLFGGAGVGKTVLIIELINNVAKAHGGYSVFAG-VGERTREGNDLYH 171

Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
           E IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I
Sbjct: 172 EMIEGGIISLTDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 231

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+
Sbjct: 232 FRFTQAGSEVSVLLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 289

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     DE   V+  +  
Sbjct: 290 LTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSASRIVDPNVVGDEHYSVARGVQK 349

Query: 379 LIHRFEETRDIRLIGG 394
           ++  +   +DI  I G
Sbjct: 350 ILQDYRSLQDIIAILG 365


>gi|6322581|ref|NP_012655.1| Atp2p [Saccharomyces cerevisiae S288c]
 gi|84028178|sp|P00830|ATPB_YEAST RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|307568101|pdb|2XOK|D Chain D, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568102|pdb|2XOK|E Chain E, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568103|pdb|2XOK|F Chain F, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|1015845|emb|CAA89652.1| ATP2 [Saccharomyces cerevisiae]
 gi|1483632|gb|AAC49475.1| F1-ATPase beta-subunit [Saccharomyces cerevisiae]
 gi|256273131|gb|EEU08086.1| Atp2p [Saccharomyces cerevisiae JAY291]
 gi|285813008|tpg|DAA08906.1| TPA: Atp2p [Saccharomyces cerevisiae S288c]
          Length = 511

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|294631413|ref|ZP_06709973.1| ATP synthase F1, beta subunit [Streptomyces sp. e14]
 gi|292834746|gb|EFF93095.1| ATP synthase F1, beta subunit [Streptomyces sp. e14]
          Length = 482

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 177/328 (53%), Gaps = 19/328 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D+       S  I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 105 GKVFNTLGEVLNVDEQYTGERWS--IHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 162

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+ + D+  + K+
Sbjct: 163 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MSDSGVIDKT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +
Sbjct: 222 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 281

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 282 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R ++E+G YP VDPL S SR+ D  + A D       + +++ ++++ +DI  I   
Sbjct: 340 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYNAAMRVKNILQKYKDLQDIIAI--- 396

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420
             G+D + ++    VH+   +  FL Q+
Sbjct: 397 -LGIDELGEEDKLVVHRARRVERFLSQN 423


>gi|227874659|ref|ZP_03992822.1| F0F1 ATP synthase subunit beta [Mobiluncus mulieris ATCC 35243]
 gi|269977540|ref|ZP_06184507.1| ATP synthase F1, beta subunit [Mobiluncus mulieris 28-1]
 gi|306817951|ref|ZP_07451689.1| ATP synthase F1 sector beta subunit [Mobiluncus mulieris ATCC
           35239]
 gi|307701363|ref|ZP_07638384.1| ATP synthase F1, beta subunit [Mobiluncus mulieris FB024-16]
 gi|227844868|gb|EEJ55014.1| F0F1 ATP synthase subunit beta [Mobiluncus mulieris ATCC 35243]
 gi|269934143|gb|EEZ90710.1| ATP synthase F1, beta subunit [Mobiluncus mulieris 28-1]
 gi|304649294|gb|EFM46581.1| ATP synthase F1 sector beta subunit [Mobiluncus mulieris ATCC
           35239]
 gi|307613524|gb|EFN92772.1| ATP synthase F1, beta subunit [Mobiluncus mulieris FB024-16]
          Length = 478

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 148/269 (55%), Gaps = 9/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PP  ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    D   
Sbjct: 127 PPTFDKLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGG 186

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I +      L K+ +V    DE P  R    L+ +T+AEYF  
Sbjct: 187 VSVFAGVGERTREGNDLIHEMADAGVLDKTAMVFGQMDEPPGTRLRVALSGLTMAEYFRD 246

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+ +L ERI  +     +
Sbjct: 247 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHS 304

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D  + 
Sbjct: 305 ITSLQAIYVPADDYTDPAPATTFAHLDATTNLSRDIASRGLYPAVDPLASTSRILDPRYV 364

Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             E  ++ + +  ++ + +E +DI  I G
Sbjct: 365 GKEHYEVATQVKQILQKNKELQDIIAILG 393


>gi|320407253|gb|ADW27402.1| ATP synthase beta subunit [Scoloplos armiger]
          Length = 360

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +     +  I ++ P        ++  +TGI+V+D+  P   G 
Sbjct: 33  GRIINVIGEPIDERGPVNAKHFAA-IHAEAPEFTEMSVEQEILETGIKVVDMLAPYAKGG 91

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L 
Sbjct: 92  KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVICLT 150

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 151 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 210

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 211 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 268

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S SR  D     +E   V+ S+  ++  ++  +DI
Sbjct: 269 HLDATTVLSRGIAELGIYPAVDPLDSSSRXLDXNIVGEEHYTVARSVQKVLQDYKSLQDI 328

Query: 390 RLIGG 394
             I G
Sbjct: 329 IAILG 333


>gi|255733362|gb|ACU31113.1| ATP synthase beta subunit [Brachionus plicatilis]
          Length = 426

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 162/318 (50%), Gaps = 24/318 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTG 148
            RI       GR++N +G+PID      +G ++ E  + +    P      VE+   +TG
Sbjct: 55  IRIPVGPATLGRIMNVIGEPIDE-----RGPITTESFAPIHAEAPEFTEMSVEQEILETG 109

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+       A+S     V    VGER RE  +
Sbjct: 110 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLVMELIYNVAKSHGGYSVFAG-VGERTREGND 168

Query: 205 FIEDYLGDNL------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILD 257
              + +   +       K  +V    +E P  R    LT +T+AEYF   +G +VLL +D
Sbjct: 169 LYHEMITTKVIDLQEHSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFID 228

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  
Sbjct: 229 NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPA 286

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SL 376
           D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   V+  +
Sbjct: 287 DDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRMMDPNVVGEEHYNVARGV 346

Query: 377 THLIHRFEETRDIRLIGG 394
             ++  F+  +DI  I G
Sbjct: 347 QKILQDFKSLQDIIAILG 364


>gi|13357686|ref|NP_077960.1| F0F1 ATP synthase subunit beta [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762163|ref|YP_001752212.1| F0F1 ATP synthase subunit beta [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920510|ref|ZP_02931798.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508849|ref|ZP_02958297.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701941|ref|ZP_02971583.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|81858619|sp|Q9PR15|ATPB_UREPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081353|sp|B1AIB8|ATPB_UREP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|11266603|pir||H82928 ATP synthase beta chain UU129 [imported] - Ureaplasma urealyticum
 gi|6899088|gb|AAF30535.1|AE002114_2 ATP synthase beta chain [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827740|gb|ACA33002.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902985|gb|EDT49274.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182675823|gb|EDT87728.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700692|gb|EDU18974.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 464

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N  G PID   +  GK    M I    P    +    +  +TGI+V+D+  P   
Sbjct: 88  LGRMFNVTGDPIDEQPAPTGK---RMPIHRPAPSFAEQAESIEILETGIKVVDLLVPFAK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+     +   +   +S+   VGER RE  + + E    D L K
Sbjct: 145 GGKIGLFGGAGVGKTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMAESDVLDK 204

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    L+ +T+AE F    G +VLL +D+I RF  +  E++   G 
Sbjct: 205 TALVFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD  
Sbjct: 265 MPSAVGYQPTLAFEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R++A  G YP + PL S SRL D          +   +  ++ RF E +DI  I G
Sbjct: 323 VVLDRAIASLGLYPAISPLQSTSRLLDPLVVGVKHYSVARRVIEILQRFMELQDIIAILG 382


>gi|151945186|gb|EDN63437.1| F1F0 ATP synthase beta subunit [Saccharomyces cerevisiae YJM789]
 gi|190409593|gb|EDV12858.1| F(1)F(0)-ATPase complex beta subunit [Saccharomyces cerevisiae
           RM11-1a]
 gi|207343779|gb|EDZ71135.1| YJR121Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|323332907|gb|EGA74310.1| Atp2p [Saccharomyces cerevisiae AWRI796]
 gi|323354292|gb|EGA86135.1| Atp2p [Saccharomyces cerevisiae VL3]
          Length = 511

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|332143472|ref|YP_004429210.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226739971|sp|B4RS81|ATPB_ALTMD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|327553494|gb|AEB00213.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 461

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +  M I  + P   ++    +  +TGI+VID+  P   G
Sbjct: 86  LGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDSNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 323 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 380


>gi|71370834|gb|AAZ30646.1| ATP synthase beta subunit [Cerebratulus lacteus]
          Length = 427

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 163/319 (51%), Gaps = 19/319 (5%)

Query: 89  HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           H  R  + P     GR+IN +G+PID    +   D    I ++ P  +     ++   TG
Sbjct: 53  HPIRIPVGPETL--GRIINVIGEPIDERGPV-PTDKRASIHAEAPEFVEMSVQQEILATG 109

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE   
Sbjct: 110 IKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 168

Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
              E IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +
Sbjct: 169 LYHEMIEGGVINLKDDSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 228

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V 
Sbjct: 229 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVP 286

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E   ++  
Sbjct: 287 ADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGEEHYTIARG 346

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  +   +DI  I G
Sbjct: 347 VQKILQNYRSLQDIIAILG 365


>gi|89574051|gb|ABD77251.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Sus scrofa]
          Length = 437

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 77  LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 135

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372

Query: 389 IRLIGG 394
           I  I G
Sbjct: 373 IIAILG 378


>gi|220913083|ref|YP_002488392.1| F0F1 ATP synthase subunit beta [Arthrobacter chlorophenolicus A6]
 gi|254808127|sp|B8HAY9|ATPB_ARTCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219859961|gb|ACL40303.1| ATP synthase F1, beta subunit [Arthrobacter chlorophenolicus A6]
          Length = 484

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG+P+D  +S         I  K P   + +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHIFNVLGQPLDVTESELDISERWPIHRKAPAFASLEGSTEMLETGIKVIDLLTPYIKGG 162

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR+ D  +   D       +  ++ + +E +DI  I G
Sbjct: 341 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 398


>gi|226947193|ref|YP_002802266.1| F0F1 ATP synthase subunit beta [Azotobacter vinelandii DJ]
 gi|226722120|gb|ACO81291.1| ATP synthase F1, beta subunit [Azotobacter vinelandii DJ]
          Length = 458

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +    I    P    +    +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEAGPIGE-EERWTIHRAAPTYAEQAGGNELLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIVMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI  I G
Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377


>gi|254464046|ref|ZP_05077457.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium Y4I]
 gi|206684954|gb|EDZ45436.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium Y4I]
          Length = 474

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR++N +G+P+D    +   +     + +  P  + Q  E     TGI+VID+  P 
Sbjct: 84  ATLGRILNVVGEPVDEKGPVNATE--TRAIHQPAPEFSEQSTESEILVTGIKVIDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVR----EFIEDY 209
             G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  
Sbjct: 142 SKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYWEMIESN 199

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
           +   DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  
Sbjct: 200 VIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VLNR+++E G YP VDPL S SRL D     +E  K+ S +  ++ R+
Sbjct: 318 PATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYKVASDVQQILQRY 377

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 378 KSLQDIIAILG 388


>gi|296331318|ref|ZP_06873790.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676304|ref|YP_003867976.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151433|gb|EFG92310.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414548|gb|ADM39667.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 473

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+ ID ++ +   D   + + +  P+ ++   E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGENIDLNEPV-PADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AE+F   +G +VL  +D+I RF  +  E++   
Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQDVLFFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR LA +    +   +   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|78049323|ref|YP_365498.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|118573779|sp|Q3BP15|ATPB_XANC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78037753|emb|CAJ25498.1| ATP synthase beta chain [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 468

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRSAPSYEDQASTTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|323336891|gb|EGA78149.1| Atp2p [Saccharomyces cerevisiae Vin13]
          Length = 511

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|261253521|ref|ZP_05946094.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
 gi|260936912|gb|EEX92901.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
          Length = 461

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+  ++  I    P    +    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGEPIDECGPIGE-KMNYGIHRSAPSYEEQSNSSELLETGVKVIDLVCPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   V+    + + R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPMIVGQEHYDVAQNVQMTLQRYKELKDIIAILG 380


>gi|164657588|ref|XP_001729920.1| hypothetical protein MGL_2906 [Malassezia globosa CBS 7966]
 gi|159103814|gb|EDP42706.1| hypothetical protein MGL_2906 [Malassezia globosa CBS 7966]
          Length = 439

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 20/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+PID    + K D S   + + PPA   Q  +    +TGI+V+D+  P   G
Sbjct: 54  GRILNVIGEPIDERGPV-KTD-SYRPIHRDPPAFVEQSTDAEILETGIKVVDLIAPYARG 111

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE----DYL 210
            +IG+F G+G+GK+ L+     +         + + VGER RE      E IE    +  
Sbjct: 112 GKIGLFGGAGVGKTVLIQELINNIAKAHGGFSVFTGVGERTREGNDLYHEMIETGVINLE 171

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E 
Sbjct: 172 GDS--KVSLVFGQMNEPPGARARVALTGLTVAEYFRDEQGQDVLLFIDNIFRFTQAGSET 229

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP   +  
Sbjct: 230 SALLGRIPSAVGYQPTLSTDMGSMQERI--TTTRKGSITSVQAVYVPADDVTDPAPATTF 287

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE G YP VDPL S SR+ D      E   + S +  L+  ++  +D
Sbjct: 288 AHLDATTVLDRSIAELGIYPAVDPLNSQSRMLDPDVVGQEHYDVASGVQKLLQDYKSLQD 347

Query: 389 IRLIGG 394
           I  I G
Sbjct: 348 IIAILG 353


>gi|38569390|gb|AAR24353.1| F1F0-ATPase beta subunit [Bifidobacterium adolescentis ATCC 15703]
          Length = 373

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|256575366|gb|ACU87651.1| AtpD [Gallibacterium anatis]
          Length = 452

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+      I    P    +    +  +TGI+VID+  P   G 
Sbjct: 83  GRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKGG 141

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  
Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKVS 201

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPQVVRQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|226493589|ref|NP_001151807.1| ATP synthase beta chain [Zea mays]
 gi|195614324|gb|ACG28992.1| ATP synthase beta chain [Zea mays]
 gi|195649793|gb|ACG44364.1| ATP synthase beta chain [Zea mays]
          Length = 553

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 161 ATLGRIINVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 215

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 216 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 274

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 275 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 334

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 335 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 392

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 393 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 452

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 453 QNYKNLQDIIAILG 466


>gi|90578412|ref|ZP_01234223.1| ATP synthase subunit B [Vibrio angustum S14]
 gi|90441498|gb|EAS66678.1| ATP synthase subunit B [Vibrio angustum S14]
          Length = 461

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 155/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG PID    +G+      I  + P    +    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGTPIDECGEIGE-KTKYAIHREAPSYEEQSNSSELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      D   +   +  ++ R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQDHYDVARGVQTVLQRYKELKDIIAILG 380


>gi|86156234|gb|ABC86835.1| ATP synthase beta subunit [Pinctada fucata]
          Length = 523

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 162/314 (51%), Gaps = 17/314 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI       GR+IN +G+PID    + + D  + I ++ P  +     ++  +TGI+V+D
Sbjct: 128 RIPVGPATLGRIINVIGEPIDERGPV-QTDKLLPIHAEAPEFVEMSVEQEILETGIKVVD 186

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY 209
           +  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + 
Sbjct: 187 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 245

Query: 210 -------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                  L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R
Sbjct: 246 ITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 305

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 306 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 363

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP V PL S SR+ D      E  ++   +  ++
Sbjct: 364 DPAPATTFAHLDATTVLSRGISELGIYPAVGPLDSTSRILDPNVVGQEHYRVARGVQKIL 423

Query: 381 HRFEETRDIRLIGG 394
             F   +DI  I G
Sbjct: 424 QDFRSLQDIIAILG 437


>gi|194332903|ref|YP_002014763.1| F0F1 ATP synthase subunit beta [Prosthecochloris aestuarii DSM 271]
 gi|194310721|gb|ACF45116.1| ATP synthase F1, beta subunit [Prosthecochloris aestuarii DSM 271]
          Length = 462

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PIDG   +   D +  I    P         + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGEPIDGMGDI-DSDTTRSIHRSAPKFDELSTKSEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +    + + VGER RE  +  E+      + K+
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEMKESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT ++IAEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDVEHRDVLLFVDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI     + G++T+V ++ V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLGTEMGELQDRI--VSTKDGSVTSVQAIYVPADDLTDPAPATTFTHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     D+      ++  ++ R+++ +DI  I G
Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKEILQRYKDLQDIIAILG 381


>gi|323347832|gb|EGA82094.1| Atp2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 511

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|323308508|gb|EGA61753.1| Atp2p [Saccharomyces cerevisiae FostersO]
          Length = 511

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|56784991|dbj|BAD82521.1| putative ATP synthase beta subunit [Oryza sativa Japonica Group]
          Length = 425

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 33  ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 87

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 88  APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 146

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 147 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 206

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 207 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 264

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 265 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 324

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 325 QNYKNLQDIIAILG 338


>gi|321260596|ref|XP_003195018.1| ATP synthase beta chain, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317461490|gb|ADV23231.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 547

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 20/316 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            +I       GR++N +G+PID    + KG     I +  P  +++    +  +TGI+V+
Sbjct: 151 IKIPVGPATLGRIMNVIGQPIDQRGPI-KGVKEAPIHADAPEFVDQSTQAEILETGIKVV 209

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+       A++     V    VGER RE  +   +
Sbjct: 210 DLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHE 268

Query: 209 YL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
                     GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I
Sbjct: 269 MRETGVINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNI 326

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+
Sbjct: 327 FRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADD 384

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTH 378
             DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D +       ++ +    
Sbjct: 385 LTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRMLDPRVVGQRHYEIATKTQQ 444

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 445 ILQSYKSLQDIIAILG 460


>gi|253579147|ref|ZP_04856417.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849245|gb|EES77205.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39BFAA]
          Length = 464

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 158/305 (51%), Gaps = 10/305 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GRV N LG P+D +    +      I  + P    +    +  +TGI+V+D+ 
Sbjct: 82  PVGEECLGRVFNLLGDPVD-NLPAPEAKERWSIHRQAPSYEEQMPATEILETGIKVVDLI 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +    
Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGERTREGNDLYNEMKES 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++
Sbjct: 201 GVIDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLFIDNIFRFTQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  S
Sbjct: 261 ALLGRMPSAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFS 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++ +G YP VDPL S SR L+ +    +  ++  S+  ++ R++E +DI
Sbjct: 319 HLDATTVLSREISSQGIYPAVDPLDSTSRILSPEIVGTEHYEIARSVQRVLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAIMG 383


>gi|112791392|gb|ABI21966.1| ATP synthase beta subunit [Pantoea stewartii]
          Length = 350

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 21/300 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150
              GR++N LG+PID      KGDL  E  S V         P    +   ++  +TGI+
Sbjct: 58  ATLGRIMNVLGEPIDM-----KGDLKEEDGSAVEVSSIHRPAPSYEEQSNSQELLETGIK 112

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207
           VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  
Sbjct: 113 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 172

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  + 
Sbjct: 173 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 232

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   
Sbjct: 233 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 290

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  + L+R +A  G YP VDPL S SR  D      E   V+  +  L+ R++E
Sbjct: 291 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 350


>gi|78185913|ref|YP_373956.1| F0F1 ATP synthase subunit beta [Chlorobium luteolum DSM 273]
 gi|78165815|gb|ABB22913.1| ATP synthase F1 subcomplex beta subunit [Chlorobium luteolum DSM
           273]
          Length = 482

 Score =  142 bits (358), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PIDG   +     +  I    P   +     + F+TGI+VID+  P   G
Sbjct: 106 LGRMLNVVGDPIDGRGPV-NATKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 164

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +    + + VGER RE  +   + +    + K+
Sbjct: 165 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 224

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT ++IAEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 225 ALVFGQMNEPPGARARVALTGLSIAEYFRDEEHRDVLLFIDNIFRFTQAGSEVSALLGRM 284

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI  +  + G++T+V ++ V  D+  DP   +  + LD   
Sbjct: 285 PSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 342

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     D+      S+  ++ R+++ +DI  I G
Sbjct: 343 VLSRQIAELGIYPAVDPLDSTSRILDPNVIGDDHYDTAQSVKQILQRYKDLQDIIAILG 401


>gi|330447292|ref|ZP_08310942.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491483|dbj|GAA05439.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 468

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 15/307 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +    I    P    +  V +  +TG++VID+  P  
Sbjct: 84  ATLGRIMNVLGQPIDECGEIGEQE-RYAIHRAAPSYEEQSNVTELLETGVKVIDLICPFA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +  
Sbjct: 143 KGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYYEMQEAGVVN 202

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
                  K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E
Sbjct: 203 IENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTE 262

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   + 
Sbjct: 263 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATT 320

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP +DPL S SR+ D      E   +   +  L+ R++E +
Sbjct: 321 FAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELK 380

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 381 DIIAILG 387


>gi|297243083|ref|ZP_06927021.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis AMD]
 gi|296889294|gb|EFH28028.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis AMD]
          Length = 495

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +   +S+   VGER RE  + I +      L+K+ +V    DE P  R   PLTA+T+AE
Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMADAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL S SR+ D
Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
             +         + +  ++ R +E +D I LIG
Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408


>gi|283782658|ref|YP_003373412.1| ATP synthase F1, beta subunit [Gardnerella vaginalis 409-05]
 gi|283440979|gb|ADB13445.1| ATP synthase F1, beta subunit [Gardnerella vaginalis 409-05]
          Length = 495

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +   +S+   VGER RE  + I +      L+K+ +V    DE P  R   PLTA+T+AE
Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMADAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL S SR+ D
Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
             +         + +  ++ R +E +D I LIG
Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408


>gi|56784992|dbj|BAD82522.1| putative ATP synthase beta subunit [Oryza sativa Japonica Group]
          Length = 419

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 27  ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 81

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 82  APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 140

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 141 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 200

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 201 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 258

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 259 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 318

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 319 QNYKNLQDIIAILG 332


>gi|320407245|gb|ADW27398.1| ATP synthase beta subunit [Erpobdella octoculata]
          Length = 369

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 19/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +     + EI +  P  +     ++  +TGI+V+D+  P   G 
Sbjct: 64  GRIINVIGEPIDERGPVNAKHFA-EIHADAPEFVEMSVEQEILETGIKVVDMLAPYAKGG 122

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------IEDYL 210
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +         + D  
Sbjct: 123 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFXG-VGERTREGNDLYHEMIMSGVIDLK 181

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
           GD  K S+V     +E P  R    LT +T+AEYF  K G +VLL +D+I RF  +  E+
Sbjct: 182 GDKSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 240

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 241 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 298

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 299 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGQEHYSVARGVQKILQDYKSLQD 358

Query: 389 IRLIGG 394
           I  I G
Sbjct: 359 IIAILG 364


>gi|229817113|ref|ZP_04447395.1| hypothetical protein BIFANG_02370 [Bifidobacterium angulatum DSM
           20098]
 gi|229784902|gb|EEP21016.1| hypothetical protein BIFANG_02370 [Bifidobacterium angulatum DSM
           20098]
          Length = 491

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TG++VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 138 PPAFDQLESKTQMFETGVKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 197

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 198 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 257

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 258 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 315

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 316 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASKGIYPAVDPLSSTSRILDPRYV 375

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                +  + +  ++ R +E +D I LIG
Sbjct: 376 GQAHYECANRVKAILQRNKELQDIIALIG 404


>gi|332308599|ref|YP_004436450.1| ATP synthase F1, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175928|gb|AEE25182.1| ATP synthase F1, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 461

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 156/300 (52%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +  M I  + P   ++    +  +TGI+VID+  P  
Sbjct: 84  ATLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPTYEDQSSSVELLETGIKVIDLVCPFA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLD 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G 
Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLAEEMGVLQERIAST--KTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E  +    +  ++ R++E +DI  I G
Sbjct: 321 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYETARGVQSVLQRYKELKDIIAILG 380


>gi|255733192|gb|ACU31053.1| F1F0-ATP synthase beta subunit [Procambarus clarkii]
          Length = 525

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 23/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  E  S +    P  ++    ++   TGI+V+D+  P
Sbjct: 138 LGRIINVIGEPIDE-----RGPVPTEFYSTIHAEAPDFVDMSVEQEILVTGIKVVDLLAP 192

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMF---ARSDCFDKVIISLVGERGRE----VREFIED-- 208
              G +IG+F G+G+GK+ L+      A        + + VGER RE      E IE   
Sbjct: 193 YSKGGKIGLFGGAGVGKTVLIMELINNAAKAHGGYSVFAGVGERTREGNDLYHEMIESGV 252

Query: 209 -YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  + 
Sbjct: 253 ISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 312

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   
Sbjct: 313 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 370

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R +AE G YP VDPL S+SR+ D     A+   +  ++  ++   + 
Sbjct: 371 TTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDPNIIGAEHYNVARAVQKILQDHKS 430

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 431 LQDIIAILG 439


>gi|226441959|gb|ACO57569.1| F1 ATP synthase beta subunit [Gillichthys mirabilis]
          Length = 505

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P   +    ++   TGI+V+
Sbjct: 109 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 167

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 226

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 227 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 344

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 404

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 405 LQDYKSLQDIIAILG 419


>gi|241765094|ref|ZP_04763085.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN]
 gi|241365286|gb|EER60114.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN]
          Length = 468

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 169/340 (49%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G +V + G     P      GR+++ LG PID    + + DL+  
Sbjct: 51  VVRTIALGSSDGLRRGIMVTNTGSAITVPVGKATLGRIMDVLGAPIDERGPVSQ-DLTAS 109

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD---NLKK-----SVVVVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +       NL+K       +V    +E P  R    
Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVA 228

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 346

Query: 356 SVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           S SR  D      D      ++   + R++E RDI  I G
Sbjct: 347 STSRQLDPNVVGEDHYATARAVQGTLQRYKELRDIIAILG 386


>gi|315121815|ref|YP_004062304.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495217|gb|ADR51816.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 480

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 175/347 (50%), Gaps = 29/347 (8%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME- 127
           V    +G  + +S GD +   G+    P      GR++N +G+P+D   ++    L+ E 
Sbjct: 57  VRCIAMGKTDGLSRGDSIIDTGKQITVPVGEATLGRIMNVIGEPVDDHGAI----LTSER 112

Query: 128 -IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMF 181
             + ++ P+   Q        TGI+VID+ +P   G +IG+F G+G+GK+ L+    +  
Sbjct: 113 RAIHQLAPSYTEQSTGSSILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNV 172

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESP 228
           A++     V    VGER RE  +   + +G  +              K  +V    +ESP
Sbjct: 173 AKAHGGYSVFAG-VGERTREGNDLYREMIGSKVNVDPSTNNGSAVGSKCSLVYGQMNESP 231

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             R    LT +T+AE+F  +G +VL  +D+I RF  +  EI+   G +P A GY +++ S
Sbjct: 232 GARARVALTGLTVAEHFRDQGQDVLFFIDNIFRFTQANSEISALLGRIPSAVGYQSTLAS 291

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           E+  L ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R ++E+G Y
Sbjct: 292 EMGELQERI--TTTLKGSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRKISEKGIY 349

Query: 349 PPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           P VDPL S S + +      E   V+  +  ++ R++  +DI  I G
Sbjct: 350 PAVDPLDSNSNILEVDTVGKEHYDVARRVQEILQRYKSLQDIIAILG 396


>gi|239993102|ref|ZP_04713626.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii ATCC 27126]
          Length = 461

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +  M I  + P   ++    +  +TGI+VID+  P   G
Sbjct: 86  LGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N L K 
Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNESNVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 323 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 380


>gi|291295349|ref|YP_003506747.1| H(+)-transporting two-sector ATPase [Meiothermus ruber DSM 1279]
 gi|290470308|gb|ADD27727.1| H(+)-transporting two-sector ATPase [Meiothermus ruber DSM 1279]
          Length = 466

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 157/297 (52%), Gaps = 16/297 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +GKPIDG   +   D  + I       + R++ E+  +TGI  ID
Sbjct: 79  RLGVSKEMVGRAFNGIGKPIDGLPPV-VADKRLPINGAPINPVAREKPEEFIQTGISAID 137

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206
           +   L  GQ++ +F+GSG+  + L +  AR        + F  V+ + +G   REV  F+
Sbjct: 138 VNMTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLGEGEGF-AVVFAAMGITQREVSYFM 196

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +++     L +SV+ +  +D+  + R + P  A+T AEY + + D +VL+IL  +T +  
Sbjct: 197 QEFERTGALSRSVLFLNKADDPTVERLLTPRMALTAAEYLAFEHDYHVLVILTDMTNYCE 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI     E+P  RGYP  ++++L  L ER G    +KG++T +  + + GD+   PI
Sbjct: 257 ALREIGGAREEIPGRRGYPGYMYTDLASLYERAGVVHGKKGSVTQIPILSMPGDDITHPI 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376
            D    I +G I + R LA++G +PP++   S+SRL +         AD K+L   L
Sbjct: 317 PDLTGYITEGQIFIARDLAQQGIFPPINVQPSLSRLMNNGIGKGKTRADHKELADQL 373


>gi|298490974|ref|YP_003721151.1| ATP synthase F1 subunit beta ['Nostoc azollae' 0708]
 gi|298232892|gb|ADI64028.1| ATP synthase F1, beta subunit ['Nostoc azollae' 0708]
          Length = 482

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG P+D    +   +  + I    P     +     F+TGI+V+D+ TP  
Sbjct: 95  ATLGRIFNVLGNPVDNQGPV-NAEARLPIHRDAPKFTELETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  +  
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL +S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 KDNLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +       DE      S+   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARSVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|82889070|gb|ABB92857.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
          Length = 310

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 153/288 (53%), Gaps = 20/288 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG  ++E + + PP+   QR+ E+   TGI+V+D+  P   G
Sbjct: 18  GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVMDLLAPYLKG 76

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 77  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +  
Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
             S LD   VL+R +AE G YP VDPL S S+        +E   V+S
Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300


>gi|260770079|ref|ZP_05879012.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|260615417|gb|EEX40603.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|315182596|gb|ADT89509.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
          Length = 460

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG PID    +G+ +    I    P    +       +TGI+VID+  P   G 
Sbjct: 86  GRIMNVLGDPIDECGPIGE-ETKYGIHRAAPSYEEQANSTALLETGIKVIDLICPFSKGG 144

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 204 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 263

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 264 SAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 321

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   V+    + + R++E +DI  I G
Sbjct: 322 LSRNIAALGLYPAIDPLDSTSRQLDPQIVGQEHYDVAQRVQMTLQRYKELKDIIAILG 379


>gi|158524734|gb|ABW71261.1| mitochondrial ATP synthase beta subunit [Phoronis muelleri]
          Length = 428

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 16/282 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +   D    I  + P  ++    ++  +TGI+V+
Sbjct: 55  IRIPVGPATLGRIINVIGEPIDERGPVNT-DKFASIHQEAPEFVDMSVEQEILETGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK T+L M   ++   K     + + VGER RE  +   +
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHE 172

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                   L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MIQTGVISLKDDTSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD + VL+R +AE G YP +DPL S SR+ D
Sbjct: 291 TDPAPATTFAHLDANTVLSRGIAELGIYPAMDPLDSTSRILD 332


>gi|220905450|ref|YP_002480762.1| F0F1 ATP synthase subunit beta [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254808145|sp|B8J439|ATPB_DESDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219869749|gb|ACL50084.1| ATP synthase F1, beta subunit [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 473

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 21/305 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR++N +G+P+D       G ++ E    + +  PA   Q  + +  +TGI+V+D+  P
Sbjct: 91  VGRILNVIGRPVDE-----MGPINAEKYYPIHRPAPAFTDQNTKVELLETGIKVVDLLVP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G ++G+F G+G+GK+ +L    +  A+      V    VGER RE  +   + L D 
Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFAG-VGERTREGNDLYHE-LKDA 203

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             L+++ +V    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++
Sbjct: 204 GVLERATLVYGQMNEPPGARARVALTALACAEYFRDEEHQDVLLFIDNIFRFTQAGSEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ ++L  L ERI  +    G+IT+V +V V  D+  DP   +  S
Sbjct: 264 ALLGRMPSAVGYQPTLGTDLGSLQERI--TSTNTGSITSVQAVYVPADDLTDPAPATTFS 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDI 389
            LDG +VL+R +AE G YP VDPL S SR+ D     +E   V+    ++  +++E +DI
Sbjct: 322 HLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHYAVARRVQMVLQKYKELQDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|34500028|gb|AAQ73596.1| ATP synthase beta subunit [Pasteurella caballi]
          Length = 445

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 155/301 (51%), Gaps = 16/301 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N LG+PID      KGD+  E    I    P    +    +  +TGI+VID+  P 
Sbjct: 84  GRIMNVLGEPIDQ-----KGDIGAEETWAIHRAAPSYEEQSNSTELLETGIKVIDLICPF 138

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS---LVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+  +    R+   +    S    VGER  E  +F  +    N L
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSDSLXVGERTPEGNDFYHEMTDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G
Sbjct: 199 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLG 258

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDS 316

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393
            +VL+R++A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I 
Sbjct: 317 TVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAIL 376

Query: 394 G 394
           G
Sbjct: 377 G 377


>gi|119026445|ref|YP_910290.1| F0F1 ATP synthase subunit beta [Bifidobacterium adolescentis ATCC
           15703]
 gi|190358260|sp|A1A3C5|ATPB_BIFAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118766029|dbj|BAF40208.1| ATP synthase subunit beta [Bifidobacterium adolescentis ATCC 15703]
          Length = 494

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 318

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 379 GQAHYDCANRVKAILQRNKELQDIIALIG 407


>gi|297202403|ref|ZP_06919800.1| ATP synthase F1, beta subunit [Streptomyces sviceus ATCC 29083]
 gi|197710076|gb|EDY54110.1| ATP synthase F1, beta subunit [Streptomyces sviceus ATCC 29083]
          Length = 478

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 12/299 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D++      S  I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNVDETYDGERWS--IHRKAPRFDELESKTEMFETGVKVIDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+ + D+  + K+
Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MSDSGVIDKT 217

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +
Sbjct: 218 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 277

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 278 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 335

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++E+G YP VDPL S SR+ D  + A D  +    +  ++ ++++ +DI  I G
Sbjct: 336 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYETAMRVKGILQKYKDLQDIIAILG 394


>gi|89574031|gb|ABD77241.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Aotus trivirgatus]
          Length = 433

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 77  LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 135

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372

Query: 389 IRLIGG 394
           I  I G
Sbjct: 373 IIAILG 378


>gi|256077755|ref|XP_002575166.1| ATP synthase beta subunit [Schistosoma mansoni]
 gi|238660396|emb|CAZ31399.1| ATP synthase beta subunit, putative [Schistosoma mansoni]
          Length = 517

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 165/317 (52%), Gaps = 28/317 (8%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFK 146
           G  RI       GR++N +G+PID      +G +  ++MS +    P  +     ++  +
Sbjct: 119 GPIRIPVGPETLGRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPDFIEMSTEQEILE 173

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREV 202
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  AR+     V    VGER RE 
Sbjct: 174 TGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREG 232

Query: 203 REF--------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253
            +         + D  G+N K S+V     +E P  R    LT +T+AEYF   +G +VL
Sbjct: 233 NDLYHEMITTGVIDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVL 291

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++
Sbjct: 292 LFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTRKGSITSVQAI 349

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
            V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     +E   V
Sbjct: 350 YVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSV 409

Query: 374 SSLTHLIHRFEETRDIR 390
           +     I   +E R ++
Sbjct: 410 ARGVQKI--LQENRSLQ 424


>gi|225352601|ref|ZP_03743624.1| hypothetical protein BIFPSEUDO_04226 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156795|gb|EEG70189.1| hypothetical protein BIFPSEUDO_04226 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 493

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 140 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 199

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 200 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 259

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 260 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 317

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 318 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 377

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 378 GQAHYDCANRVKAILQRNKELQDIIALIG 406


>gi|16080734|ref|NP_391562.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311641|ref|ZP_03593488.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315969|ref|ZP_03597774.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320880|ref|ZP_03602174.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325165|ref|ZP_03606459.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313231|ref|YP_004205518.1| F0F1 ATP synthase subunit beta [Bacillus subtilis BSn5]
 gi|584808|sp|P37809|ATPB_BACSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta; AltName: Full=Vegetative protein 31; Short=VEG31
 gi|433991|emb|CAA82260.1| ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2636206|emb|CAB15698.1| ATP synthase (subunit beta, component F1) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291486264|dbj|BAI87339.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019505|gb|ADV94491.1| F0F1 ATP synthase subunit beta [Bacillus subtilis BSn5]
          Length = 473

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+ ID ++ +   D   + + +  P+ ++   E +  +TGI+V+D+  P 
Sbjct: 90  VTLGRVFNVLGENIDLNEPV-PADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + F E      +
Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AE+F   +G +VL  +D+I RF  +  E++   
Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDVQGQDVLFFIDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
               L R L E G YP VDPLAS SR LA +    +   +   +   + R++E +DI  I
Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|261364179|ref|ZP_05977062.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996]
 gi|288567786|gb|EFC89346.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996]
          Length = 465

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D   S+   D    I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGSIDT-DKHRAIHQTAPKFDELSATTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      S KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|171742083|ref|ZP_02917890.1| hypothetical protein BIFDEN_01188 [Bifidobacterium dentium ATCC
           27678]
 gi|283456791|ref|YP_003361355.1| ATP synthase subunit beta [Bifidobacterium dentium Bd1]
 gi|171277697|gb|EDT45358.1| hypothetical protein BIFDEN_01188 [Bifidobacterium dentium ATCC
           27678]
 gi|283103425|gb|ADB10531.1| ATP synthase beta chain [Bifidobacterium dentium Bd1]
          Length = 494

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 318

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 379 GQAHYDCANRVKAILQRNKELQDIIALIG 407


>gi|59802447|ref|YP_209159.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA 1090]
 gi|194100111|ref|YP_002003251.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae NCCP11945]
 gi|239998099|ref|ZP_04718023.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|240013280|ref|ZP_04720193.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI18]
 gi|240015728|ref|ZP_04722268.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA6140]
 gi|240079862|ref|ZP_04724405.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
 gi|240114817|ref|ZP_04728879.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
 gi|240120352|ref|ZP_04733314.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID24-1]
 gi|240122656|ref|ZP_04735612.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
 gi|240124844|ref|ZP_04737730.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
 gi|260441369|ref|ZP_05795185.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|268593951|ref|ZP_06128118.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268596007|ref|ZP_06130174.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268600473|ref|ZP_06134640.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268681255|ref|ZP_06148117.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268683425|ref|ZP_06150287.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
 gi|291044726|ref|ZP_06570435.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|293397825|ref|ZP_06642031.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62]
 gi|75432313|sp|Q5F4Z0|ATPB_NEIG1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740654|sp|B4RJG0|ATPB_NEIG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|59719342|gb|AAW90747.1| putative ATP synthase beta chain [Neisseria gonorrhoeae FA 1090]
 gi|193935401|gb|ACF31225.1| ATP synthase subunit B [Neisseria gonorrhoeae NCCP11945]
 gi|268547340|gb|EEZ42758.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268549795|gb|EEZ44814.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268584604|gb|EEZ49280.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268621539|gb|EEZ53939.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268623709|gb|EEZ56109.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
 gi|291011620|gb|EFE03616.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|291611771|gb|EFF40840.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62]
 gi|317165543|gb|ADV09084.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 465

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++      + S VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     G+D + D+   AV +   I  FL Q
Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407


>gi|240112071|ref|ZP_04726561.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
 gi|254492881|ref|ZP_05106052.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268598130|ref|ZP_06132297.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
 gi|226511921|gb|EEH61266.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268582261|gb|EEZ46937.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
          Length = 465

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++      + S VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     G+D + D+   AV +   I  FL Q
Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407


>gi|91178126|gb|ABE27298.1| mitochondrial F-ATPase beta subunit [Clavispora lusitaniae]
          Length = 337

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 165/307 (53%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +     +  I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 19  LGRIINVVGEPIDERGPINSKKRN-PIHTEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 77

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    ++
Sbjct: 78  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMQETGVINF 136

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 194

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGALQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +    E  ++ S++   +  ++  +
Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGKEHYEVASNVQQTLQAYKSLQ 312

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 313 DIIAILG 319


>gi|226441961|gb|ACO57570.1| F1 ATP synthase beta subunit [Gillichthys seta]
          Length = 505

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P   +    ++   TGI+V+
Sbjct: 109 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 167

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 226

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 227 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 344

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 404

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 405 LQDYKSLQDIIAILG 419


>gi|321309648|ref|YP_004191977.1| ATP synthase F1 subunit beta [Mycoplasma haemofelis str. Langford
           1]
 gi|319801492|emb|CBY92138.1| ATP synthase F1, beta subunit [Mycoplasma haemofelis str. Langford
           1]
          Length = 474

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 164/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N LG+PID +  L  G L  + +  +PP++  Q       +TGI++ID+  P   G
Sbjct: 93  GRMFNVLGEPID-NMPLDSG-LERKPIHALPPSLKDQSSTVSIMETGIKIIDLLIPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ +++    +       +S+   VGER RE  + + E      LK +
Sbjct: 151 SKIGLFGGAGVGKTVIVTELIHNCALGHDGLSIFVGVGERSREGNDLYFEMEHSGVLKNT 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
           V++    +E+P  R    L+ +T+AE+F      +VLL +D+I RF+ +  E+++  G  
Sbjct: 211 VLLFGQMNETPGARMRVALSGLTMAEHFRDDYCSDVLLFIDNIFRFSQAGSEVSSLLGRT 270

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P + GY  ++  E+ RL ERI  +    G+IT++ +V V  D+  DP   +V + LD  +
Sbjct: 271 PSSVGYQPTLAYEMGRLQERI--TSTRNGSITSIQAVYVPADDITDPAPATVFAHLDAKV 328

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           VL+R +A  G YP V PL S S L +  +   E   V++ +  ++ ++EE +DI  I G
Sbjct: 329 VLDRKIASLGIYPAVSPLQSSSNLLNPEYVGQEHYDVANRVVEILQKYEELQDIIAILG 387


>gi|298253173|ref|ZP_06976965.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis 5-1]
 gi|297532568|gb|EFH71454.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis 5-1]
          Length = 495

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +   +S+   VGER RE  + I +      L+K+ +V    DE P  R   PLTA+T+AE
Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMADAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL S SR+ D
Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
             +         + +  ++ R +E +D I LIG
Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408


>gi|117922561|ref|YP_871753.1| F0F1 ATP synthase subunit beta [Shewanella sp. ANA-3]
 gi|166222416|sp|A0L2S8|ATPB_SHESA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117614893|gb|ABK50347.1| ATP synthase F1, beta subunit [Shewanella sp. ANA-3]
          Length = 463

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 157/301 (52%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PID   ++G+ +  + I    P    +    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGDPIDEAGAIGEEERYV-IHRSAPSYEEQSNTTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|318136084|gb|ADV41652.1| ATP synthase beta subunit [Anadara sp. KJP-2011]
          Length = 427

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 163/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            +I       GR+IN +G+PID    +   D    I ++ P  +     ++  +TGI+V+
Sbjct: 55  IKIPVGPATLGRIINVIGEPIDERGPVDT-DKYAAIHAEAPAFVEMSVEQEILETGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +    
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHQ 172

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                   L DN  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MITSKVISLTDNTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     ++  +V+  +  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSNSRILDVNVVGEKHYMVARGVQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 351 LQDYKSLQDIIAILG 365


>gi|194037554|ref|XP_001929445.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Sus scrofa]
          Length = 528

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|118573714|sp|Q3B6W8|ATPB1_PELLD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
          Length = 462

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PIDG   +     +  I    P   +     + F+TGI+VID+  P   G
Sbjct: 86  LGRMLNVVGDPIDGRGPV-NATKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +    +    + + VGER RE  +   + +    + K+
Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT ++IAEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEEHRDVLLFIDNIFRFTQAGSEVSALLGRM 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L +RI  +  + G++T+V ++ V  D+  DP   +  + LD   
Sbjct: 265 PSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     D+      S+  ++ R+++ +DI  I G
Sbjct: 323 VLSRQIAELGIYPAVDPLDSTSRILDPNVIGDDHYDTAQSVKQILQRYKDLQDIIAILG 381


>gi|4388533|emb|CAA75477.1| F1-ATP synthase, beta subunit [Sorghum bicolor]
          Length = 454

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 163/313 (52%), Gaps = 25/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      +GD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 80  ATLGRIINVIGEPIDE-----RGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 134

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE 
Sbjct: 135 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 194

Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
               LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF
Sbjct: 195 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 254

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 255 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 312

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++ 
Sbjct: 313 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQ 372

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 373 NYKNLQDIIAILG 385


>gi|306822066|ref|ZP_07455450.1| ATP synthase F1 sector beta subunit [Bifidobacterium dentium ATCC
           27679]
 gi|309802574|ref|ZP_07696678.1| ATP synthase F1, beta subunit [Bifidobacterium dentium JCVIHMP022]
 gi|304554666|gb|EFM42569.1| ATP synthase F1 sector beta subunit [Bifidobacterium dentium ATCC
           27679]
 gi|308220638|gb|EFO76946.1| ATP synthase F1, beta subunit [Bifidobacterium dentium JCVIHMP022]
          Length = 494

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 318

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 379 GQAHYDCANRVKAILQRNKELQDIIALIG 407


>gi|325293991|ref|YP_004279855.1| F0F1 ATP synthase subunit beta [Agrobacterium sp. H13-3]
 gi|325061844|gb|ADY65535.1| F0F1 ATP synthase subunit beta [Agrobacterium sp. H13-3]
          Length = 484

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +        I    P  + +    +   TGI+V+D+  P   G
Sbjct: 97  LGRIMNVIGEPVDEAGPIVTAK-KRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKG 155

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  N+ K 
Sbjct: 156 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKL 214

Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                  + +V    +E P  R    LT +TIAE F  +G +VL  +D+I RF  +  E+
Sbjct: 215 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEV 274

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 275 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAPATSF 332

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 333 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQD 392

Query: 389 IRLIGG 394
           I  I G
Sbjct: 393 IIAILG 398


>gi|313897004|ref|ZP_07830551.1| ATP synthase F1, beta subunit [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320529504|ref|ZP_08030589.1| ATP synthase F1, beta subunit [Selenomonas artemidis F0399]
 gi|312974451|gb|EFR39919.1| ATP synthase F1, beta subunit [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320138215|gb|EFW30112.1| ATP synthase F1, beta subunit [Selenomonas artemidis F0399]
          Length = 470

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 8/301 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ +D + +      S  I    P   +++   +  +TGI+V+D+  P  
Sbjct: 87  ATLGRVFNVLGETVDHNPAPVGNTESWPIHRPAPKFDDQETSTQILETGIKVVDLIAPYS 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+ L+     +   +     + + VGER RE  +   +      + 
Sbjct: 147 RGGKVGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVID 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 207 KTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VL+R +AE G YP VDPL S SR+ D      E  ++   +  ++ +++E +DI  I 
Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGQEHYEVARGVQAVLQKYKELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|301059561|ref|ZP_07200473.1| ATP synthase F1, beta subunit [delta proteobacterium NaphS2]
 gi|300446326|gb|EFK10179.1| ATP synthase F1, beta subunit [delta proteobacterium NaphS2]
          Length = 469

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 158/300 (52%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GRV+N +G+P+DG   LG  +         P P+   Q       +TG++VID+  P   
Sbjct: 91  GRVLNVVGRPVDG---LGPVETKEYYPIHRPAPSFEEQDTSVNVLETGVKVIDLLVPFPR 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G ++G+F G+G+GK+ ++     +       IS+   VGER RE  + ++E      L K
Sbjct: 148 GGKMGMFGGAGVGKTVVMMEMIHNIAMQHGGISVFAGVGERTREGNDLYMEMKESGVLPK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + ++     E P  R    L+A+T AEY+   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 AALIYGQMTEPPGARARVALSALTAAEYYRDERGQDVLLFVDNIFRFTQAGAEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P A GY  ++ ++L  L ERI  +   KG+IT+V  V V  D+  DP   +  + LDG 
Sbjct: 268 TPSAVGYQPTLGTDLGALQERI--TSTTKGSITSVQCVYVPADDLTDPAPATTFAHLDGT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394
           +VL+R L E G YP VDPL S SR+ D  +  +E    + +    + +++E +DI  I G
Sbjct: 326 VVLSRPLTELGIYPAVDPLDSSSRILDPNFLGEEHYNTAMMVQRTLQKYKELQDIIAILG 385


>gi|114644226|ref|XP_509149.2| PREDICTED: ATP synthase subunit beta, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 529

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|24376219|ref|NP_720263.1| F0F1 ATP synthase subunit beta [Shewanella oneidensis MR-1]
 gi|81588954|sp|Q8E8C0|ATPB_SHEON RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|24351279|gb|AAN57706.1|AE015907_4 ATP synthase F1, beta subunit [Shewanella oneidensis MR-1]
          Length = 463

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 157/301 (52%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PID   ++G+ +  + I    P    +    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGDPIDEAGAIGEEERYV-IHRAAPSYEEQSNTTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|327264485|ref|XP_003217044.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Anolis
           carolinensis]
          Length = 528

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 165/319 (51%), Gaps = 25/319 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTG 148
            RI       GR++N +G+PID      +G ++ +  + +    PA     VE+    TG
Sbjct: 132 IRIPVGPETLGRIMNVIGEPIDE-----RGPITTKQFAAIHAEAPAFVEMSVEQEILVTG 186

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE   
Sbjct: 187 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 245

Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
              E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +
Sbjct: 246 LYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 305

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V 
Sbjct: 306 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAIYVP 363

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  
Sbjct: 364 ADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGQEHYDVARG 423

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 424 VQKILQDYKSLQDIIAILG 442


>gi|306774115|ref|NP_001182423.1| ATP synthase subunit beta, mitochondrial [Macaca mulatta]
          Length = 529

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|172036427|ref|YP_001802928.1| F0F1 ATP synthase subunit beta [Cyanothece sp. ATCC 51142]
 gi|171697881|gb|ACB50862.1| ATP synthase F1, beta subunit [Cyanothece sp. ATCC 51142]
          Length = 479

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 150/294 (51%), Gaps = 11/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV N  G+ IDG +++ +G+     + +VP P   R        TGI+ IDI TP+  G
Sbjct: 99  GRVFNVFGETIDGKEAITEGNWRS--IHQVPLPLQQRSTTSDILATGIKAIDILTPIEQG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L++    +       ISL   +GER RE  E   +      L  +
Sbjct: 157 GKAGLFGGAGVGKTVLITEMIHNMVSQYQGISLFCGIGERNREAEELYREMQDAGVLDNT 216

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
           +++    DE P  R      A+T+AEYF  +   +VLL++D+I RF  + +E++   G L
Sbjct: 217 IMLFGQMDEPPGARFRVGHAALTMAEYFRDELKQDVLLLMDNIFRFIQAGQEVSGLMGRL 276

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ +EL  L ERI  +    G+IT+V +V V  D+  DP A      L   I
Sbjct: 277 PSRVGYQPTLGTELAELEERI--TNTATGSITSVQAVYVPADDFTDPAAVQTFGHLSASI 334

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+R  A EG YP +DPL S S++       +    +   +   +  +E+ +DI
Sbjct: 335 VLSRKRASEGLYPAIDPLQSGSKMLSPTIVGERHYNIAQGIKSTLASYEDLKDI 388


>gi|38906099|gb|AAR27802.1| ATP synthase beta chain [Bifidobacterium coryneforme]
 gi|38906101|gb|AAR27803.1| ATP synthase beta chain [Bifidobacterium choerinum]
          Length = 373

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VENQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|183206566|gb|ACC54481.1| ATP synthase beta subunit [Campanula sarmatica]
          Length = 482

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 34  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 93

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 94  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 150

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++     +     
Sbjct: 151 KIGLFGGAGVGKTVLIMELINNIAKAHGXVSVFGGVSERTREGNDLYKEMKDSGVINEQK 210

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 211 FAETKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 270

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 271 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 328

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +DI
Sbjct: 329 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDI 388

Query: 390 RLIGG 394
             I G
Sbjct: 389 ITILG 393


>gi|195378829|ref|XP_002048184.1| GJ13823 [Drosophila virilis]
 gi|194155342|gb|EDW70526.1| GJ13823 [Drosophila virilis]
          Length = 611

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR++N +G PID    + K +    I ++ P  +      +  +TGI+VI
Sbjct: 115 IRVPVGKVVLGRIVNVVGDPIDERGEI-KSEFYSFIHNEAPELIELNVKPEILETGIKVI 173

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    S  A++     V +   GER RE      E
Sbjct: 174 DLLAPYVKGGKIGLFGGAGVGKTVLIMELISNIAKTHGGYSVFVG-AGERTREGNDLYHE 232

Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D+  K  +V    +E P  R    LT +TIAEYF    G +VLL +D+I 
Sbjct: 233 MIETKVISLEDDSSKVALVYGQMNEPPGARSRVVLTGLTIAEYFRDIDGQDVLLFIDNIF 292

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V  D+ 
Sbjct: 293 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGMMQERI--TSTKNGSITSVQAVYVPADDL 350

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
           +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     DE   V+ ++   
Sbjct: 351 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSTSRVLDPEIVGDEHYNVARAVQKT 410

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 411 LQGYKSLQDIIAILG 425


>gi|117927861|ref|YP_872412.1| F0F1 ATP synthase subunit beta [Acidothermus cellulolyticus 11B]
 gi|190358246|sp|A0LSL6|ATPB_ACIC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117648324|gb|ABK52426.1| ATP synthase F1 subcomplex beta subunit [Acidothermus
           cellulolyticus 11B]
          Length = 490

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 165/304 (54%), Gaps = 22/304 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N LG+ +D           +E+  + P     PA ++   + +  +TGI+VID+ T
Sbjct: 112 GHVFNVLGQTLDVP--------RIEVTERWPIHRPAPAFDQLEAKTEMLETGIKVIDLLT 163

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGD 212
           P   G +IG+F G+G+GK+ L+  M  R +  F  V + + VGER RE  + F+E     
Sbjct: 164 PYVRGGKIGLFGGAGVGKTVLIQEMIHRVAKNFGGVSVFAGVGERTREGNDLFLEMTESG 223

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            +  +V+V    DE P  R    L A+T+AEYF   K  +VLL +D+I RF  +  E++T
Sbjct: 224 VINDTVLVFGQMDEPPGCRLRVGLAALTMAEYFRDVKRQDVLLFIDNIFRFVQAGSEVST 283

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT+V ++ V  D+  DP   +  + 
Sbjct: 284 LLGRMPSAVGYQPTLADEMGALQERI--TSTRGHSITSVQAIYVPADDITDPAPHTTFTH 341

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E+G YP VDPL S SR+ D  +  +E  ++ + +  ++ R+++ +DI 
Sbjct: 342 LDATTVLSRPISEKGIYPAVDPLDSTSRILDPQFIGEEHFRVANQVKQILQRYKDLQDII 401

Query: 391 LIGG 394
            I G
Sbjct: 402 AILG 405


>gi|240117019|ref|ZP_04731081.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
 gi|268602705|ref|ZP_06136872.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
 gi|268586836|gb|EEZ51512.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
          Length = 465

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++      + S VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     G+D + D+   AV +   I  FL Q
Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407


>gi|157377616|ref|YP_001476216.1| F0F1 ATP synthase subunit beta [Shewanella sediminis HAW-EB3]
 gi|189081347|sp|A8G1W5|ATPB_SHESH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157319990|gb|ABV39088.1| ATP synthase F1, beta subunit [Shewanella sediminis HAW-EB3]
          Length = 458

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 14/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+P+D    +G+ D  + I  + P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGEPVDEAGPIGEEDRYV-IHREAPSYEDQSSSTELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNL 214
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F   +ED     L
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SGVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSALLG 258

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R++A  G YP VDPL S SR  D      E   + + +   + R++E +DI  I 
Sbjct: 317 TVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVATGVQTQLQRYKELKDIIAIL 376

Query: 394 G 394
           G
Sbjct: 377 G 377


>gi|114695|sp|P25075|ATPB_BACFI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 467

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 171/330 (51%), Gaps = 16/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID  + +   D    I  + P         +  +TGI+V+D+  P  
Sbjct: 88  ATLGRVFNVLGEAIDLGEPVAADDKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +  +IS+   VGER RE  +   +      +K
Sbjct: 148 IGGKIGLFGGAGVGKTVLIQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIK 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           KS +V    +E P  R    L+ +T+AE+F  + G +VLL +D+I+ F  +  E++   G
Sbjct: 208 KSAMVFGQMNEPPGARMAVALSGLTMAEHFRDRDGQDVLLFVDNIS-FTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  + G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + +++E +DI  I 
Sbjct: 325 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 383

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + ++    VH+   I  FL Q+
Sbjct: 384 ---LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|187931020|ref|YP_001891004.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|226740203|sp|B2SEY1|ATPB_FRATM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|187711929|gb|ACD30226.1| ATP synthase, F1 sector, subunit beta [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 458

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N LG+PID    +   +     + + PPA +   +     +TGI+V+D+  P   
Sbjct: 83  LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L 
Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    L+ +TIAE F  +  +VL+ +D+I R+  +  E++   G 
Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  
Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           IVL+R +AE G YP VDPL S SR  D      D  ++  ++  ++ R++E +DI  I G
Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYEIARAVQKVLQRYKELKDIIAILG 377


>gi|159185297|ref|NP_355558.2| F0F1 ATP synthase subunit beta [Agrobacterium tumefaciens str. C58]
 gi|81848584|sp|Q8UC76|ATPB_AGRT5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|159140555|gb|AAK88343.2| ATP synthase beta chain [Agrobacterium tumefaciens str. C58]
          Length = 484

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +        I    P  + +    +   TGI+V+D+  P   G
Sbjct: 97  LGRIMNVIGEPVDEAGPIVTAK-KRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKG 155

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  N+ K 
Sbjct: 156 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKL 214

Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                  + +V    +E P  R    LT +TIAE F  +G +VL  +D+I RF  +  E+
Sbjct: 215 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEV 274

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 275 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAPATSF 332

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 333 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQD 392

Query: 389 IRLIGG 394
           I  I G
Sbjct: 393 IIAILG 398


>gi|318135950|gb|ADV41649.1| ATP synthase beta subunit [Chondrilla nucula]
          Length = 394

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +G   LS  I ++ P  +     ++   TGI+V+D+ TP   G
Sbjct: 31  LGRIINVIGEPIDERGPIGADTLS-SIHAEAPEFVEMNVNQEILVTGIKVVDLLTPYAKG 89

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +        L
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMITSRVIDL 148

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
             +  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 149 EGDASKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 208

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 209 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 266

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R+++E G YP VDPL S SR+ D      D      ++  ++  ++  +D
Sbjct: 267 AHLDATTVLSRAISELGIYPAVDPLDSNSRILDPNIVGQDHYDTARNVQKVLQDYKSLQD 326

Query: 389 IRLIGG 394
           I  I G
Sbjct: 327 IIAILG 332


>gi|312115964|ref|YP_004013560.1| ATP synthase F1 subunit beta [Rhodomicrobium vannielii ATCC 17100]
 gi|311221093|gb|ADP72461.1| ATP synthase F1, beta subunit [Rhodomicrobium vannielii ATCC 17100]
          Length = 477

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 19/308 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    + K +    I ++ P  +++    +   TGI+V+D+  P   G 
Sbjct: 88  GRIMNVIGEPIDEAGPI-KSNQRRPIHAQAPSFVDQSTEVEVLVTGIKVVDLLAPYSKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVR----EFIEDYLG---- 211
           ++G+F G+G+GK+ L+     +         + + VGER RE      E IE  +     
Sbjct: 147 KVGLFGGAGVGKTVLIQELINNIAKGHGGYSVFAGVGERTREGNDLYWEMIESKVNVDPH 206

Query: 212 ----DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                   K  +V    +E P  R    LT +T+AEYF  +G +VL  +D+I RF  +  
Sbjct: 207 ESGSSQGSKCSLVFGQMNEPPGARARVALTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 266

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +
Sbjct: 267 EVSALLGRIPSAVGYQPTLATDMGALQERI--TSTSKGSITSVQAIYVPADDLTDPAPAA 324

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+RS+AE+G YP VDPL S SR  +     +E  K+   +  ++ R++  
Sbjct: 325 SFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRALEPRIVGEEHYKVARQVQVILQRYKAL 384

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 385 QDIIAILG 392


>gi|163785175|ref|ZP_02179863.1| F0F1 ATP synthase subunit beta [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879556|gb|EDP73372.1| F0F1 ATP synthase subunit beta [Hydrogenivirga sp. 128-5-R1-1]
          Length = 477

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +GKPID    + + +    I    P   ++    + F+TGI+VID+  P   G
Sbjct: 96  LGRIFNVVGKPIDEAGPV-EAEEHWPIFRPAPTFEDQATKVEIFETGIKVIDLLVPFIKG 154

Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
            ++G+F G+G+GK+ L+       A+      V++  VGER RE  + ++E      L  
Sbjct: 155 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 213

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P +R     T +TIAEYF   +  +VL+ +D+I RF  +  E++T  G 
Sbjct: 214 TAMVYGQMNEPPGVRFRVAHTGLTIAEYFRDVENQDVLIFIDNIFRFVQAGAEVSTLLGR 273

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP A GY  ++ +++  + ERI  ++   G+IT++ +V V  D+  DP   S+ + LD  
Sbjct: 274 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 331

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           IVL R LAE G YP +DPL S S+     +  +E   V+  +  ++ R++E ++I  I G
Sbjct: 332 IVLQRRLAELGIYPAIDPLESTSKALAPEYVGEEHYTVAREVQRILQRYKELQEIIAILG 391


>gi|1352033|sp|P29707|ATPB_PROMO RecName: Full=ATP synthase subunit beta, sodium ion specific;
           AltName: Full=Na(+)-translocating ATPase subunit beta
 gi|897798|emb|CAA41374.1| beta subunit [Propionigenium modestum]
          Length = 467

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 159/305 (52%), Gaps = 17/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIF 155
              GR++N LG+P+D       G++  E  + +    PA   Q  EK  F+TGI+V+D+ 
Sbjct: 84  AVLGRILNVLGEPVDE-----AGEVKAEEYAPIHREAPAFEDQGTEKEVFETGIKVVDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+  ++ L  
Sbjct: 139 APYVKGGKIGLFGGAGVGKTVLIMELINNIAQGHGGLSVFAGVGERTREGRDLYDEMLES 198

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
             L K+ +V    +E P  R    LT +T+AE F  K G +VL  +D+I RF  +  E++
Sbjct: 199 GVLDKTSLVYGQMNEPPGARLRVGLTGLTMAENFRDKEGQDVLFFVDNIFRFTQAPSEVS 258

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 259 ALLGRMPSAVGYQPNLATDMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFT 316

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +A  G YP VDPL S S  L  +    +       +  ++ R++E +DI
Sbjct: 317 HLDATTVLSRRIASLGIYPAVDPLDSTSTALEPQIIGHEHYNTAREVQQILQRYKELQDI 376

Query: 390 RLIGG 394
             I G
Sbjct: 377 IAILG 381


>gi|289549061|ref|YP_003474049.1| ATP synthase F1 subunit beta [Thermocrinis albus DSM 14484]
 gi|289182678|gb|ADC89922.1| ATP synthase F1, beta subunit [Thermocrinis albus DSM 14484]
          Length = 473

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 164/311 (52%), Gaps = 11/311 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  ++       GR+ N +G+PID    +   +    I    PP   +    +  +TGI+
Sbjct: 82  GPIKVPVGRATLGRIFNVVGQPIDEAGPV-NAEEYWPIFRDPPPLEEQSTKVEILETGIK 140

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-FDK---VIISLVGERGREVREFI 206
           VID+  P   G ++G+F G+G+GK+ L+     +   F K   V+I  VGER RE  +  
Sbjct: 141 VIDLLEPYVKGGKVGLFGGAGVGKTVLMQELIHNIAKFHKGFSVVIG-VGERTREGNDLW 199

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           ++      L  +V+V    +E P +R     T +T+AEYF   +G +VL+ +D+I RF  
Sbjct: 200 KEMKESGVLPYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRDVEGQDVLVFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++T  G LP A GY  ++ +++  + ERI  +  +KG++T++ +V V  D+  DP 
Sbjct: 260 AGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSLTSIQAVYVPADDITDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             SV + LD   VL+R LAE G YP +DPL S S+ LA +    +       +  ++ R+
Sbjct: 318 PYSVFAHLDATTVLSRRLAELGIYPAIDPLESTSKYLAPEYVGEEHYNTAMEVKRILQRY 377

Query: 384 EETRDIRLIGG 394
           +E ++I  I G
Sbjct: 378 KELQEIIAILG 388


>gi|297737737|emb|CBI26938.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 152/275 (55%), Gaps = 18/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    + K D  + I  + P  +++   ++   TGI+V+D+  P  
Sbjct: 27  ATLGRIINVIGEPIDERGEI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 85

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 86  RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 144

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 145 KLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 204

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 205 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 262

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 263 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 297


>gi|88811293|ref|ZP_01126549.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231]
 gi|88791832|gb|EAR22943.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231]
          Length = 465

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D    +G  + +M I  + P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPVDERGPVGAKE-TMSIHRQAPAFDELAASTELLETGIKVIDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +         
Sbjct: 142 GKVGLFGGAGVGKTVNMLELINNIAKEHGGLSVFAG-VGERTREGNDFYHEMAESGVIKL 200

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           D+L +S V  V    +E P  R    L+ +T+AEYF  +G +VLL +D+I R+  +  E+
Sbjct: 201 DDLPESKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDEGRDVLLFIDNIYRYTLAGVEV 260

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 261 SALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTF 318

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
             LD  +VL+R +AE G YP VDPL S SR  D      E  ++   +   + R++E +D
Sbjct: 319 GHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYQVARQVQGTLQRYKELKD 378

Query: 389 IRLIGG 394
           I  I G
Sbjct: 379 IIAILG 384


>gi|319761166|ref|YP_004125103.1| ATP synthase f1, beta subunit [Alicycliphilus denitrificans BC]
 gi|330823024|ref|YP_004386327.1| ATP synthase F1 subunit beta [Alicycliphilus denitrificans K601]
 gi|317115727|gb|ADU98215.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans BC]
 gi|329308396|gb|AEB82811.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans K601]
          Length = 469

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 174/340 (51%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  + +  G +V + G     P      GR+++ LG PID    + + +L+  
Sbjct: 51  IVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVSQ-ELTAS 109

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169

Query: 184 SDCFDKVIISLVGERGREVREFIEDY------LGDNLKKSVV--VVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +       + ++L +S V  V    +E P  R    
Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMSDSKVVVQEDLSQSKVAMVYGQMNEPPGNRLRVA 228

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLD 346

Query: 356 SVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           S SR  D     +E   V+ ++   + R++E RDI  I G
Sbjct: 347 STSRQLDPHVVGEEHYGVARAVQGTLQRYKELRDIIAILG 386


>gi|46909249|gb|AAT06142.1| ATP synthase beta subunit [Nucula proxima]
          Length = 427

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            +I       GR+IN +G+PID    +   D    I ++ P  +     ++  +TGI+V+
Sbjct: 55  IKIPVGPATLGRIINVIGEPIDERGPVDT-DKYAAIHAEAPAFVEMSVEQEILETGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                   L DN  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MITSKVISLTDNTSKVSLVHGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     ++  +V+  +  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSNSRILDVNVVGEKHYMVARGVQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 351 LQDYKSLQDIIAILG 365


>gi|17232531|ref|NP_489079.1| F0F1 ATP synthase subunit beta [Nostoc sp. PCC 7120]
 gi|20141199|sp|P06540|ATPB_ANASP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|17134177|dbj|BAB76738.1| ATP synthase beta subunit [Nostoc sp. PCC 7120]
          Length = 482

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I    P     +     F+TGI+V+D+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  +  
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +NL +S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 NENLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++ +L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +       DE      ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|256832993|ref|YP_003161720.1| ATP synthase F1, beta subunit [Jonesia denitrificans DSM 20603]
 gi|256686524|gb|ACV09417.1| ATP synthase F1, beta subunit [Jonesia denitrificans DSM 20603]
          Length = 493

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 155/273 (56%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSD 185
           + + PPA ++ +   + F+TGI+ ID+ TP   G +IG+F G+G+GK+ L+   ++  ++
Sbjct: 136 IHRKPPAFDQLESKTQMFETGIKSIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIYRVAN 195

Query: 186 CFDKV-IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
             + V + + VGER RE  + I++      +K++ +V    DE P  R    L+A+T+AE
Sbjct: 196 NHNGVSVFAGVGERTREGNDLIDEMTESGVIKQTALVFGQMDEPPGTRLRVALSALTMAE 255

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 256 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGMLQERI--TST 313

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP +DPLAS SR+ D
Sbjct: 314 RGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAIDPLASTSRILD 373

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +   E  ++ + +  ++ R +E +DI  I G
Sbjct: 374 PRYVGKEHYEVATQVKSILQRNKELQDIIAILG 406


>gi|222619064|gb|EEE55196.1| hypothetical protein OsJ_03042 [Oryza sativa Japonica Group]
          Length = 480

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 88  ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 142

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 143 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 201

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 202 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 262 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 319

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 320 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 379

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 380 QNYKNLQDIIAILG 393


>gi|159905996|ref|YP_001549658.1| V-type ATP synthase subunit B [Methanococcus maripaludis C6]
 gi|238686989|sp|A9AAQ3|VATB_METM6 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|159887489|gb|ABX02426.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Methanococcus maripaludis C6]
          Length = 462

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 23/289 (7%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRV 141
           F     +I  S    GR+ N  GKP+DG      +  L      +  +S+ PP    Q  
Sbjct: 77  FTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQ-- 134

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISL 194
                TGI  ID    L  GQ+I +F+GSG+  + L +  AR        + F  V+ + 
Sbjct: 135 -----TGISTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAA 188

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNV 252
           +G  G E   F++++     L+K+VV +  +D+  I R + P  A+T AEY +  KG +V
Sbjct: 189 MGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHV 248

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+IL  +T +  ++REIA    E+P  RGYP  ++++L  L ER G  +  +G +T +  
Sbjct: 249 LVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPI 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           + +  D+   PI D    I +G IVL+R L  +G YPPVD L S+SRLA
Sbjct: 309 LTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGIYPPVDILPSLSRLA 357


>gi|294939284|ref|XP_002782393.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239893999|gb|EER14188.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 524

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 158/307 (51%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N +G+PID    LG  + +    I    P       V +   TGI+V+D+  P   
Sbjct: 133 GRIMNVIGEPID---ELGPIECNTRWPIHRPAPTFSEMDTVARQLYTGIKVVDLLAPYTK 189

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL--- 214
           G +IG+F G+G+GK+ ++     +         + + VGER RE  +   + +   +   
Sbjct: 190 GGKIGLFGGAGVGKTVVIMELINNIAMKHGGFSVFAGVGERTREGNDLYHEMIAGGVIKK 249

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
                 K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 250 DKAPGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDEEGQDVLLFIDNIFRFTQACSE 309

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+  DP   + 
Sbjct: 310 VSALLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADDLTDPAPATT 367

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD + VL+R +AE G YP VDPL S SR+ D +    E   V+ S+  ++  ++  +
Sbjct: 368 FAHLDANTVLSRHIAELGIYPAVDPLDSTSRMLDPSIVGQEHYDVARSVQKVLQDYKSLQ 427

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 428 DIIAILG 434


>gi|158524736|gb|ABW71262.1| mitochondrial ATP synthase beta subunit [Sagitta setosa]
          Length = 428

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 149/284 (52%), Gaps = 16/284 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   I       GR+IN +G+PID    + + D  + I  + P        ++  +TGI+
Sbjct: 53  GPITIPVGPATLGRIINVIGEPIDERGPI-ETDKFLPIHQEAPEFTEMSTEQEILETGIK 111

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----V 202
           V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     
Sbjct: 112 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLY 170

Query: 203 REFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDS 258
            E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+
Sbjct: 171 HEMIEGGVISLTDKTSKVALVYGQMNEPPGARARVCLTGLTVAEYFRDYEGQDVLLFIDN 230

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D
Sbjct: 231 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPAD 288

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 289 DLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRILD 332


>gi|326797428|ref|YP_004315248.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1]
 gi|326548192|gb|ADZ93412.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1]
          Length = 458

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +    I    P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEKGPIGEEE-RWSIHRSAPSYADQSSSNELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVIDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP +DPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQMVLQRYKELKDIIAILG 377


>gi|56551137|ref|YP_161976.1| F0F1 ATP synthase subunit beta [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|81820933|sp|Q5NQY9|ATPB_ZYMMO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56542711|gb|AAV88865.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 484

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 163/319 (51%), Gaps = 21/319 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR++N +G+P+D    +G    +M I +  PP   +        TGI+VID
Sbjct: 83  RVPVGPETLGRIMNVVGRPVDERGPIGSKQ-TMPIHADAPPFTEQSTDTAILTTGIKVID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G ++G+F G+G+GK+ L+     +         + + VGER RE      EF+
Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFL 201

Query: 207 E------DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
           E      D  G+ +    K  +V    +E P  R    L+ +T+AEYF   +G +VL  +
Sbjct: 202 EAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFV 261

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  +KG+IT+V ++ V 
Sbjct: 262 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKKGSITSVQAIYVP 319

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+R+++E G YP VDPL S SR  +     DE  +    
Sbjct: 320 ADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPRIVGDEHYQTARD 379

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ R++  +DI  I G
Sbjct: 380 VQEILQRYKNLQDIIAILG 398


>gi|150400504|ref|YP_001324270.1| V-type ATP synthase subunit B [Methanococcus aeolicus Nankai-3]
 gi|167016627|sp|A6UT36|VATB_META3 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|150013207|gb|ABR55658.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Methanococcus aeolicus Nankai-3]
          Length = 464

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 146/276 (52%), Gaps = 9/276 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++  S    GR+ N  GKP+DG   +   D  ++I       ++RQ      +TGI  ID
Sbjct: 83  KLGVSTDMLGRIFNGAGKPLDGGPDIIAED-KIDINGYPLNPVSRQSPNDFVQTGISTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIE 207
               L  GQ+I +F+GSG+  + L +  AR      SD    V+ + +G    E   F+ 
Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNLLAAQIARQAKVRGSDEQFAVVFAAMGITAEESNYFMN 201

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHS 265
           ++     L+ +VV +  +D+  I R + P  A+T AEY +  KG +VL+I+  IT +  +
Sbjct: 202 EFKRTGALENAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVIMTDITNYCEA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REIA    E+P  RGYP  ++++L  L ER G  + + G +T +  + +  D+   PI 
Sbjct: 262 LREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGKSGTVTQIPILTMPHDDITHPIP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           D    I +G IVL+R L  +G YPPVD L S+SRLA
Sbjct: 322 DLTGYITEGQIVLSRELNRKGIYPPVDVLPSLSRLA 357


>gi|71018215|ref|XP_759338.1| hypothetical protein UM03191.1 [Ustilago maydis 521]
 gi|46099188|gb|EAK84421.1| hypothetical protein UM03191.1 [Ustilago maydis 521]
          Length = 523

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 20/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    + KG+    I  + P  +++    +  +TGI+V+D+  P   G 
Sbjct: 139 GRIMNVIGEPMDERGPI-KGNKLAPIHVEPPAFVDQSTKAEVLETGIKVVDLLAPYARGG 197

Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L+       A++     V    VGER RE      E IE    +  
Sbjct: 198 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFTG-VGERTREGNDLYHEMIETGVINLE 256

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E 
Sbjct: 257 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSET 314

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  
Sbjct: 315 SALLGRIPSAVGYQPTLATDMGVMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTF 372

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D A    E   + + +  L+  ++  +D
Sbjct: 373 AHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPAVVGREHYDIATGVQKLLQDYKSLQD 432

Query: 389 IRLIGG 394
           I  I G
Sbjct: 433 IIAILG 438


>gi|254821309|ref|ZP_05226310.1| F0F1 ATP synthase subunit beta [Mycobacterium intracellulare ATCC
           13950]
          Length = 486

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D     G+      I  K PP    +   +  +TG++V+D+ TP   G 
Sbjct: 107 GHVFNALGHCLD-KPGYGEDLEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 165

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    D LK + 
Sbjct: 166 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEADVLKDTA 225

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G +P
Sbjct: 226 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 285

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +  +IT++ +V V  D++ DP   +  + LD    
Sbjct: 286 SAVGYQPTLADEMGELQERITSTRGK--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 343

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+  +G +P VDPLAS S + D +   DE  ++   +  ++ R+++ +DI  I G
Sbjct: 344 LSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 401


>gi|311113891|ref|YP_003985112.1| ATP synthase F1 sector subunit beta [Gardnerella vaginalis ATCC
           14019]
 gi|310945385|gb|ADP38089.1| ATP synthase F1 sector beta subunit [Gardnerella vaginalis ATCC
           14019]
          Length = 495

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197

Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +   +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AE
Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL S SR+ D
Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
             +         + +  ++ R +E +D I LIG
Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408


>gi|332529017|ref|ZP_08404983.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624]
 gi|332041567|gb|EGI77927.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624]
          Length = 471

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 171/342 (50%), Gaps = 22/342 (6%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G +V + G+    P      GR+++ LG PID    + +   +  
Sbjct: 55  VVRTIALGSSDGLRRGLMVTNTGKAITVPVGKATLGRIMDVLGNPIDERGPVAQTQ-TAS 113

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 114 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 173

Query: 184 SDCFDKVIISLVGERGREVREFI----------EDYLGDNLKKSVVVVATSDESPILRKM 233
           +     V    VGER RE  +F           ++ LGD+  K  +V    +E P  R  
Sbjct: 174 AHSGLSVFAG-VGERTREGNDFYHEMSDAGVVNQESLGDS--KVAMVYGQMNEPPGNRLR 230

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
             LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL
Sbjct: 231 VALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 290

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 291 QERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDP 348

Query: 354 LASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L S SR  D +    D      ++   + R++E RDI  I G
Sbjct: 349 LDSTSRQLDPQVVGEDHYTTARAVQGTLQRYKELRDIIAILG 390


>gi|222087437|ref|YP_002545974.1| ATP synthase F1, beta subunit [Agrobacterium radiobacter K84]
 gi|221724885|gb|ACM28041.1| ATP synthase F1, beta subunit [Agrobacterium radiobacter K84]
          Length = 485

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 159/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I  + P  + +    +   TGI+V+D+  P   G
Sbjct: 101 LGRIMNVIGEPVDEAGPLITA-TKRSIHQEAPSYVEQSTEGQILVTGIKVVDLLAPYAKG 159

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     +
Sbjct: 160 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 218

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 219 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDEGQDVLFFVDNIFRFTQAGSEV 278

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 279 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 336

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 337 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPLVVGEEHYEIARKVQSTLQRYKALQD 396

Query: 389 IRLIGG 394
           I  I G
Sbjct: 397 IIAILG 402


>gi|167627186|ref|YP_001677686.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667748|ref|ZP_04755326.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876292|ref|ZP_05249002.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189081334|sp|B0TWS7|ATPB_FRAP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167597187|gb|ABZ87185.1| ATP synthase F1, beta subunit [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254842313|gb|EET20727.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 458

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N LG+PID    +   +     + + PPA +   +     +TGI+V+D+  P   
Sbjct: 83  LGRIMNVLGEPIDEAGPIQYTE--TRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L 
Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    L+ +TIAE F  +  +VL+ +D+I R+  +  E++   G 
Sbjct: 200 KVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  
Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           IVL+R +AE G YP VDPL S SR  D      D  +   ++  ++ R++E +DI  I G
Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGHDHYETARAVQKVLQRYKELKDIIAILG 377


>gi|223585571|gb|ACM91675.1| F1F0-ATP synthase beta subunit [Fenneropenaeus chinensis]
          Length = 525

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +     S  I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 139 GRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKGG 197

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L 
Sbjct: 198 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLCHEMIESGVISLK 256

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 257 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 316

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 317 ALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 374

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S+SR+ D      E   V+ S+  ++   +  +DI
Sbjct: 375 HLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQDI 434

Query: 390 RLIGG 394
             I G
Sbjct: 435 IAILG 439


>gi|254455836|ref|ZP_05069265.1| ATP synthase F1, beta subunit [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082838|gb|EDZ60264.1| ATP synthase F1, beta subunit [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 472

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 23/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR+IN +G+PID      KG++  +    + +  P  N Q  E     TGI+VID+  P 
Sbjct: 85  GRIINVIGEPIDE-----KGEVKTKETWPIHRSAPEFNDQSTETEILVTGIKVIDLLAPY 139

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +   + 
Sbjct: 140 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMIDSGVI 199

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  K+ +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +  
Sbjct: 200 KTDGEGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLFFVDNIFRFTQAGS 259

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +
Sbjct: 260 EVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITSVQAIYVPADDLTDPAPAT 317

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +AE G YP VDPL S SR+ D     DE  ++   +  ++  ++  
Sbjct: 318 SFAHLDATTVLSRQIAEIGIYPAVDPLDSTSRILDPRIVGDEHYRVAREVQKVLQTYKSL 377

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 378 QDIIAILG 385


>gi|195327959|ref|XP_002030684.1| GM25584 [Drosophila sechellia]
 gi|194119627|gb|EDW41670.1| GM25584 [Drosophila sechellia]
          Length = 625

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R++      GR++N +G PID D    K D    I ++ P   +     +   TGI+VI
Sbjct: 179 IRVAVGKAVLGRILNVVGDPID-DRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVI 237

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE      E
Sbjct: 238 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 296

Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D+  K V+V    +E P  R    LT +TIAEYF    G +VLL +D+I 
Sbjct: 297 MIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 356

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+ 
Sbjct: 357 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 414

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
           +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   
Sbjct: 415 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 474

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 475 LQAYKSLQDIIAILG 489


>gi|257069064|ref|YP_003155319.1| ATP synthase, F1 beta subunit [Brachybacterium faecium DSM 4810]
 gi|256559882|gb|ACU85729.1| ATP synthase, F1 beta subunit [Brachybacterium faecium DSM 4810]
          Length = 495

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 159/300 (53%), Gaps = 20/300 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMNRQRVEKG---FKTGIRVIDIF 155
            G V + +G P      L K    +EI  + P    A N  ++E     F+TGI+ ID+ 
Sbjct: 112 LGTVFDVVGSP------LNKSADQLEITERWPIHRKAPNFDQLESSTVMFETGIKSIDLL 165

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGD 212
           TP   G +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+    
Sbjct: 166 TPYVKGGKIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGWDLIEEMTES 225

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             ++K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++
Sbjct: 226 GVIEKTALVFGQMDEPPGTRLRVALSALTMAEYFRDEQSQDVLLFIDNIFRFTQAGSEVS 285

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
           T  G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  +
Sbjct: 286 TLLGRMPSAVGYQPNLADEMGVLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFA 343

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
            LD    L+R +A  G YP +DPLAS SR+ D  +   D       +  ++ R +E +DI
Sbjct: 344 HLDATTELSREIASRGLYPAIDPLASTSRILDPRYVGQDHYDTAVRVKQILQRNKELQDI 403


>gi|225024609|ref|ZP_03713801.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC
           23834]
 gi|224942623|gb|EEG23832.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC
           23834]
          Length = 465

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG P+D    +G  D +  I    P         +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPVDEQGPIGS-DQTRAIHQFAPKFDELSSTTELLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +++AEYF      + KG +VL  +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E R
Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|224368451|ref|YP_002602614.1| F0F1 ATP synthase subunit beta [Desulfobacterium autotrophicum
           HRM2]
 gi|223691167|gb|ACN14450.1| AtpD1 [Desulfobacterium autotrophicum HRM2]
          Length = 459

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 153/292 (52%), Gaps = 8/292 (2%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+IN  G+PIDG   L        + +K  P + R    + F+TGI++ID+ +PL  G +
Sbjct: 85  RMINVFGQPIDGGPPLAPDTQYRPVYAKPVPLIQRTVQNEIFETGIKIIDLLSPLEKGGK 144

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
            G+F G+G+GK+ +++    +       +SL   +GER RE  E F E      L K+ +
Sbjct: 145 AGLFGGAGVGKTVIITEMINNMVGRYEGVSLFCGIGERCREAEELFREMKEAGVLDKTAM 204

Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V A  +E+   R      A+T+AE+F  +   +VLL++D+I R+  +  E++   G +P 
Sbjct: 205 VFAQMNEASGARFRVGHGALTLAEFFRDTLKKDVLLLIDNIFRYIQAGSELSGLMGRIPS 264

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ SEL  L ERI       G IT+V +V V  D+  DP A    S L   IVL
Sbjct: 265 HVGYQPTLASELAELEERI--CSTANGAITSVQAVYVPADDFTDPAASHTFSHLSAAIVL 322

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
            R  A +G YP VDPLAS S +   A  S D  + V ++   +  +E+ +DI
Sbjct: 323 ARKRASQGFYPAVDPLASNSSMLTPAIVSNDHYQTVQAVRKTLSDYEDLKDI 374


>gi|317506179|ref|ZP_07964000.1| ATP synthase F1 [Segniliparus rugosus ATCC BAA-974]
 gi|316255524|gb|EFV14773.1| ATP synthase F1 [Segniliparus rugosus ATCC BAA-974]
          Length = 482

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG   D  D+ G G D     + + PPA ++ +   +  +TGI+VID+ TP   
Sbjct: 104 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 160

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ 
Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLKLEMEEMGVLQD 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G 
Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 281 MPSAVGYQPTLADEMGQLQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+R +++ G YP VDPL S SR+ + +   DE  ++ + +  ++ +++E +DI  I G
Sbjct: 339 TELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 398


>gi|257056928|ref|YP_003134760.1| ATP synthase, F1 beta subunit [Saccharomonospora viridis DSM 43017]
 gi|256586800|gb|ACU97933.1| ATP synthase, F1 beta subunit [Saccharomonospora viridis DSM 43017]
          Length = 477

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG+ +D     G G DL    + + PPA ++ +   +  +TG++VID+ TP   
Sbjct: 99  GHVYNALGECLD---EPGYGADLERWSIHRKPPAFDQLEGKTEMLETGLKVIDLLTPYVQ 155

Query: 161 GQRIGVFAGSGIGKSTLL-SMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      +  
Sbjct: 156 GGKIGLFGGAGVGKTVLIKEMITRVARNFGGTSVFAGVGERTREGTDLFLEMSEDGVIND 215

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 216 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 275

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 276 MPSAVGYQPTLADEMGVLQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDAT 333

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+RS+ ++G +P VDPLAS S + D A   +E  ++ S +  ++ +++E +DI  I G
Sbjct: 334 TELSRSVFQKGIFPAVDPLASSSTILDPAIVGEEHYRVASEVIRILQKYKELQDIIAILG 393


>gi|88860637|ref|ZP_01135274.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2]
 gi|88817232|gb|EAR27050.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2]
          Length = 461

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +  M I    P    +    +  +TGI+VID+  P  
Sbjct: 84  ATLGRIMNVLGEPIDEAGPIGE-EERMSIHRAAPSYEEQSSSIELLETGIKVIDLVCPFA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLD 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G 
Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLAEEMGVLQERI--ASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 321 VVLSRDIASLGIYPAVDPLDSSSRQLDPLVIGQEHYDAARGVQTVLQRYKELKDIIAILG 380


>gi|269128113|ref|YP_003301483.1| ATP synthase F1 subunit beta [Thermomonospora curvata DSM 43183]
 gi|268313071|gb|ACY99445.1| ATP synthase F1, beta subunit [Thermomonospora curvata DSM 43183]
          Length = 476

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 159/303 (52%), Gaps = 18/303 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG+ +D   S  + +    I  K P     +   +   TGI+VID+ TP   G 
Sbjct: 98  GHVWNALGETLDVPTSSLEINERWSIHRKAPDFDQLESKTEMLVTGIKVIDLLTPYVKGG 157

Query: 163 RIGVFAGSGIGKSTLLSM--------FARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213
           +IG+F G+G+GK+ L+          F  + CF     + VGER RE  + ++E      
Sbjct: 158 KIGLFGGAGVGKTVLIQEMIRRVAKNFGGTSCF-----AGVGERTREGNDLWVEMAESGV 212

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           LK +V+V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T 
Sbjct: 213 LKDTVLVFGQMDEPPGTRLRVALSALTMAEYFRDVQKKDVLLFIDNIFRFTQAGSEVSTL 272

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + L
Sbjct: 273 LGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDITDPAPHTTFAHL 330

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL R +AE+G +P VDPL S SR+ D +    +  ++   +  ++ +++E +DI  
Sbjct: 331 DATTVLARPIAEKGIFPAVDPLDSTSRIMDPQVIGQEHYEVAQEVKRILQKYKELQDIIA 390

Query: 392 IGG 394
           I G
Sbjct: 391 ILG 393


>gi|262277907|ref|ZP_06055700.1| ATP synthase F1, beta subunit [alpha proteobacterium HIMB114]
 gi|262225010|gb|EEY75469.1| ATP synthase F1, beta subunit [alpha proteobacterium HIMB114]
          Length = 473

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 167/334 (50%), Gaps = 26/334 (7%)

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVP 133
           E +  GD V   G   R+       GR+IN +G+ ID      KGD+  +    I  + P
Sbjct: 62  EGLKRGDKVTDTGDAIRVPVGPETLGRIINVIGEGIDQ-----KGDVKTKEQWPIHRQAP 116

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDK 189
             + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     
Sbjct: 117 EFVEQSTETEVLVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 176

Query: 190 VIISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           V    VGER RE  +   + +   +        K+ +V    +E P  R    LT +T+A
Sbjct: 177 VFAG-VGERTREGNDLYHEMIESGVIKTDGPGSKAALVYGQMNEPPGARARVALTGLTVA 235

Query: 243 EYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF  K G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 236 EYFRDKEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TT 293

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V ++ V  D+  DP   +  S LD   VL+R +AE G YP VDPL S SR+ 
Sbjct: 294 TTKGSITSVQAIYVPADDLTDPAPATSFSHLDATTVLSRQIAELGIYPAVDPLDSTSRIL 353

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D     DE  ++   +  ++  ++  +DI  I G
Sbjct: 354 DPRIVGDEHYRVAREVQRILQTYKSLQDIIAILG 387


>gi|90413754|ref|ZP_01221742.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
 gi|90325223|gb|EAS41720.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
          Length = 468

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 166/333 (49%), Gaps = 16/333 (4%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +  G  V + GR   +       GR++N LG+PID    +G+ +    I  + P
Sbjct: 58  MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGE-EQRYAIHREAP 116

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +       +S
Sbjct: 117 SYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLS 176

Query: 194 L---VGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   VGER RE  +F        + +    +  K  +V    +E P  R    LT +T+A
Sbjct: 177 VFAGVGERTREGNDFYFEMQEAGVVNIENPSESKVAMVYGQMNEPPGNRLRVALTGLTMA 236

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  
Sbjct: 237 ERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D
Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                 E   +   +  L+ R++E +DI  I G
Sbjct: 355 PLVVGQEHYDIARGVQSLLQRYKELKDIIAILG 387


>gi|310815415|ref|YP_003963379.1| ATP synthase F1, beta subunit [Ketogulonicigenium vulgare Y25]
 gi|308754150|gb|ADO42079.1| ATP synthase F1, beta subunit [Ketogulonicigenium vulgare Y25]
          Length = 473

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 164/313 (52%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
              GR++N +G+P+D    +    +S E   +    PA + Q        TGI+VID+  
Sbjct: 83  ATLGRILNVIGEPVDEKGPV----ISTETRPIHNTAPAFDEQSTSSEILVTGIKVIDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIE 207
           P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE
Sbjct: 139 PYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIE 196

Query: 208 DYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
             +   DNL +S V  V    +E P  R    LT +TIAE F  + G +VL  +D+I RF
Sbjct: 197 SGVIKPDNLTESKVALVYGQMNEPPGARSRVALTGLTIAEQFRDTSGSDVLFFVDNIFRF 256

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 257 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTD 314

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381
           P   +  + LD    L+R+++E G YP VDPL S SRL D A   +E   V+ S+  ++ 
Sbjct: 315 PAPAATFAHLDATTTLSRAISEMGIYPAVDPLDSTSRLMDPAIVGEEHYAVARSVQIILQ 374

Query: 382 RFEETRDIRLIGG 394
           +++  +DI  I G
Sbjct: 375 KYKSLQDIIAILG 387


>gi|157363033|ref|YP_001469800.1| F0F1 ATP synthase subunit beta [Thermotoga lettingae TMO]
 gi|190358709|sp|A8F3K2|ATPB_THELT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157313637|gb|ABV32736.1| ATP synthase F1, beta subunit [Thermotoga lettingae TMO]
          Length = 469

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 172/305 (56%), Gaps = 21/305 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR++N +GKPID      KGD+  E    + +  P +  Q+ E +  +TGI+VID+  P
Sbjct: 88  LGRILNVVGKPIDE-----KGDIQAEDYWPIHRPAPKITEQKTEIEVLETGIKVIDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG F G+G+GK+ L+    R+   ++   S+   VGER RE  + ++E      
Sbjct: 143 FPKGGKIGFFGGAGVGKTVLVMELIRNIAIEQKGFSVFAGVGERTREGNDLWLEMQEAGV 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           L+ +V+V    +E P  R    LTA+TIAEYF   +G +VLL +D+I RF  +  E++  
Sbjct: 203 LENTVLVFGQMNEPPGARFRVGLTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  S L
Sbjct: 263 LGRMPSAVGYQPTLATDMGELQERI--TSTQKGSITSVQAIYVPADDITDPAPATTFSHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKA---WSADEKKLVSSLTHLIHRFEETRDI 389
           D  +VL+R +AE G YP VDPL S S++ D A   W  +  ++   +  ++ R+++ +DI
Sbjct: 321 DASVVLSRKIAELGIYPAVDPLDSTSKILDPAVIGW--EHYQVARGVQEVLQRYKDLQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|4519356|dbj|BAA75593.1| ATP synthase beta-subunit [Paulschulzia pseudovolvox]
          Length = 376

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D +  L K + ++ I  K P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVD-NMGLVKVEETLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYEKAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|225424142|ref|XP_002283951.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 557

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 152/275 (55%), Gaps = 18/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    + K D  + I  + P  +++   ++   TGI+V+D+  P  
Sbjct: 165 ATLGRIINVIGEPIDERGEI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 223

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 224 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 282

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 283 KLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 342

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 343 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 400

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 401 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 435


>gi|134045591|ref|YP_001097077.1| V-type ATP synthase subunit B [Methanococcus maripaludis C5]
 gi|167016630|sp|A4FXD3|VATB_METM5 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|132663216|gb|ABO34862.1| Sodium-transporting two-sector ATPase [Methanococcus maripaludis
           C5]
          Length = 462

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 168/337 (49%), Gaps = 26/337 (7%)

Query: 43  VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99
           +  G+ V     N D   GQV+    +I  +       E++  +  + F     +I  S 
Sbjct: 29  IAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSH 88

Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
              GR+ N  GKP+DG      +  L      +  +S+ PP    Q       TG+  ID
Sbjct: 89  DMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQ-------TGVSTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206
               L  GQ+I +F+GSG+  + L +  AR        + F  V+ + +G  G E   F+
Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAAMGITGEESNYFM 200

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L+K+VV +  +D+  I R + P  A+T AEY +  KG +VL+IL  +T +  
Sbjct: 201 DEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCE 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REIA    E+P  RGYP  ++++L  L ER G  + ++G +T +  + +  D+   PI
Sbjct: 261 ALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPI 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            D    I +G IVL+R L  +G YPPVD L S+SRLA
Sbjct: 321 PDLTGYITEGQIVLSRELNRKGIYPPVDILPSLSRLA 357


>gi|32189394|ref|NP_001677.2| ATP synthase subunit beta, mitochondrial precursor [Homo sapiens]
 gi|114549|sp|P06576|ATPB_HUMAN RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|179281|gb|AAA51809.1| ATP synthase beta subunit precursor [Homo sapiens]
 gi|16741373|gb|AAH16512.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Homo sapiens]
 gi|119617358|gb|EAW96952.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Homo sapiens]
 gi|123981364|gb|ABM82511.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [synthetic construct]
 gi|123996207|gb|ABM85705.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [synthetic construct]
 gi|158255606|dbj|BAF83774.1| unnamed protein product [Homo sapiens]
 gi|224487773|dbj|BAH24121.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [synthetic construct]
          Length = 529

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|158524726|gb|ABW71257.1| mitochondrial ATP synthase beta subunit [Alcyonidium diaphanum]
          Length = 428

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G PID    + + D    I  + P  ++     +   TGI+V+
Sbjct: 55  IRIPVGQQTLGRIINVIGSPIDERGEI-QCDEKWPIHREAPAFVDMSVEAEILVTGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE-- 207
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  E  
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYEEM 173

Query: 208 ------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                 D  G N  K  +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I 
Sbjct: 174 KESKVIDLEGGN-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDAEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D   +  ++  L
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDANIVGHDHYNIARAVQKL 350

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 351 LQDYKSLQDIIAILG 365


>gi|152998457|ref|YP_001343292.1| F0F1 ATP synthase subunit beta [Marinomonas sp. MWYL1]
 gi|190358234|sp|A6W3S8|ATPB2_MARMS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|150839381|gb|ABR73357.1| ATP synthase F1, beta subunit [Marinomonas sp. MWYL1]
          Length = 458

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEKGPIGEEE-RWSIHRSAPSYAEQSSSNELLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP +DPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQMVLQRYKELKDIIAILG 377


>gi|28574560|ref|NP_648836.2| CG5389 [Drosophila melanogaster]
 gi|19527761|gb|AAL89995.1| AT04467p [Drosophila melanogaster]
 gi|28380508|gb|AAF49540.2| CG5389 [Drosophila melanogaster]
          Length = 622

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R++      GR++N +G PID D    K D    I ++ P   +     +   TGI+VI
Sbjct: 176 IRVAVGKAVLGRILNVVGDPID-DRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVI 234

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE      E
Sbjct: 235 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 293

Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D+  K V+V    +E P  R    LT +TIAEYF    G +VLL +D+I 
Sbjct: 294 MIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 353

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+ 
Sbjct: 354 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 411

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
           +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   
Sbjct: 412 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 471

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 472 LQAYKSLQDIIAILG 486


>gi|321479063|gb|EFX90019.1| hypothetical protein DAPPUDRAFT_309746 [Daphnia pulex]
          Length = 533

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 16/282 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +   D    I ++ P  +     ++   TGI+V+
Sbjct: 137 IRIPVGPETLGRIMNVIGEPIDERGPIVT-DKFAAIHAEAPEFVEMNVAQEILITGIKVV 195

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 196 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 254

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 255 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 314

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 315 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 372

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D
Sbjct: 373 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMMD 414


>gi|160893773|ref|ZP_02074557.1| hypothetical protein CLOL250_01327 [Clostridium sp. L2-50]
 gi|156864758|gb|EDO58189.1| hypothetical protein CLOL250_01327 [Clostridium sp. L2-50]
          Length = 453

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  G  +DG  +L   D    ++ + PP+   Q  V +  +TGI+VID+  P   G
Sbjct: 77  GRLFNVTGDTLDGGPNLA--DTEHWVIHRDPPSFEDQSPVVEILETGIKVIDLLAPYAKG 134

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+    ++   +     I + VGER RE  + + E      L K+
Sbjct: 135 GKIGLFGGAGVGKTVLIQELIQNVATEHGGYSIFTGVGERSREGNDLWTEMKESGVLSKT 194

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     T +T+AEYF      +VLL +D+I RF  +  E+++  G +
Sbjct: 195 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVNHQDVLLFIDNIFRFVQAGSEVSSLLGRM 254

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +EL  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   
Sbjct: 255 PSAVGYQPTLANELGELQERIASTKS--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 312

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R + E+G YP VDPL S SR+ +     +E   V+  +  ++ ++ E +DI  I G
Sbjct: 313 VLSRKIVEQGIYPAVDPLESNSRILEVDVVGEEHYNVARGVQEILQKYRELQDIIAILG 371


>gi|47218629|emb|CAG04958.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 517

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P   +    ++   TGI+V+
Sbjct: 121 IRIPVGPETLGRIMNVIGEPIDERGPITTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 179

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 239 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+   +   +  +
Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 416

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 417 LQDYKSLQDIIAILG 431


>gi|302542480|ref|ZP_07294822.1| ATP synthase F1, beta subunit [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460098|gb|EFL23191.1| ATP synthase F1, beta subunit [Streptomyces himastatinicus ATCC
           53653]
          Length = 480

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+ ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 101 GRVFNTLGEILNEPEAESEVTERWAIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R     +   + + VGER RE  + IE+      L ++ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHEGVSVFAGVGERTREGNDLIEEMAESGVLPQTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPNLADEMGILQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
           L+R ++E+G YP VDPL S SR+ D  + S D     S +  ++ ++++ +DI
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYDCASRVKSILQKYKDLQDI 391


>gi|226941914|ref|YP_002796988.1| AtpB [Laribacter hongkongensis HLHK9]
 gi|254808155|sp|C1D5G2|ATPB_LARHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226716841|gb|ACO75979.1| AtpB [Laribacter hongkongensis HLHK9]
          Length = 458

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 12/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+++ LG PID    LG    +  M I    P         +  +TGI+VID+  P
Sbjct: 81  ATLGRIMDVLGTPID---ELGPVATEERMPIHRAAPKFDELSASSELLETGIKVIDLLCP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213
              G ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +    N 
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFTGVGERTREGNDFYHEMKESNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   
Sbjct: 198 LDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALL 257

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+ +  ER+  +  + G+IT++ +V V  D+  DP   +  + LD
Sbjct: 258 GRMPSAVGYQPTLAEEMGKFQERV--ASTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLI 392
             +VL+R +A  G YP VDPL S SR  D     DE   V+    + + +++E RDI  I
Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVARGVQMTLQKYKELRDIIAI 375

Query: 393 GG 394
            G
Sbjct: 376 LG 377


>gi|224099437|ref|XP_002311483.1| predicted protein [Populus trichocarpa]
 gi|222851303|gb|EEE88850.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+ ID      KGDL  E    I  + P  + +   ++   TGI+V+D+ 
Sbjct: 166 ATLGRIINVIGEAIDE-----KGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLL 220

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 221 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 279

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 280 SGVIKLGDQQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 339

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 340 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 397

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 398 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVL 457

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 458 QNYKNLQDIIAILG 471


>gi|188993189|ref|YP_001905199.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           campestris str. B100]
 gi|190358711|sp|B0RWC2|ATPB_XANCB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167734949|emb|CAP53161.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris]
          Length = 468

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|170779040|gb|ACB36913.1| F1-ATP synthase beta subunit [Litopenaeus vannamei]
          Length = 525

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +     S  I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 139 GRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKGG 197

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L 
Sbjct: 198 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISLK 256

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 257 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 316

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 317 ALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 374

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S+SR+ D      E   V+ S+  ++   +  +DI
Sbjct: 375 HLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQDI 434

Query: 390 RLIGG 394
             I G
Sbjct: 435 IAILG 439


>gi|319411542|emb|CBQ73586.1| probable ATP2-F1F0-ATPase complex, F1 beta subunit [Sporisorium
           reilianum]
          Length = 540

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 18/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    + KG     I  + P  +++    +  +TGI+V+D+  P   G 
Sbjct: 156 GRIMNVIGEPMDERGPI-KGAKLAPIHVEPPAFVDQSTKAEVLETGIKVVDLLAPYARGG 214

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE----DYLG 211
           +IG+F G+G+GK+ L+     +         + + VGER RE      E IE    +  G
Sbjct: 215 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFTGVGERTREGNDLYHEMIETGVINLEG 274

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E +
Sbjct: 275 DS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSETS 332

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 333 ALLGRIPSAVGYQPTLATDMGVMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 390

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S SR+ D A    E   + +S   L+  ++  +DI
Sbjct: 391 HLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPAIVGREHYDIATSTQKLLQDYKSLQDI 450

Query: 390 RLIGG 394
             I G
Sbjct: 451 IAILG 455


>gi|150402226|ref|YP_001329520.1| V-type ATP synthase subunit B [Methanococcus maripaludis C7]
 gi|167016631|sp|A6VFZ3|VATB_METM7 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|150033256|gb|ABR65369.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Methanococcus maripaludis C7]
          Length = 462

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 26/337 (7%)

Query: 43  VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99
           +  G+ V     N D   GQV+    +I  +       E++  +  + F     +I  S 
Sbjct: 29  IAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSY 88

Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
              GR+ N  GKP+DG      +  L      +  +S+ PP    Q       TGI  ID
Sbjct: 89  DMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQ-------TGISTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206
               L  GQ+I +F+GSG+  + L +  AR        + F  V+ + +G  G E   F+
Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAAMGITGEESNYFM 200

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L+K+VV +  +D+  I R + P  A+T AEY +  KG +VL+IL  +T +  
Sbjct: 201 DEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCE 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REIA    E+P  RGYP  ++++L  L ER G  +  +G +T +  + +  D+   PI
Sbjct: 261 ALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPILTMPDDDITHPI 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            D    I +G IVL+R L  +G YPPVD L S+SRLA
Sbjct: 321 PDLTGYITEGQIVLSRELNRKGIYPPVDILPSLSRLA 357


>gi|47459043|ref|YP_015905.1| F0F1 ATP synthase subunit beta [Mycoplasma mobile 163K]
 gi|81828479|sp|Q6KI82|ATPB_MYCMO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|47458372|gb|AAT27694.1| ATP synthase beta chain [Mycoplasma mobile 163K]
          Length = 470

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 168/325 (51%), Gaps = 16/325 (4%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
            + N +G+ ID + S+        I  K P    +    +  +TGI+VID+  P   G +
Sbjct: 88  HMFNVIGENID-NQSIDPNTEKWSIHRKAPSYEEQTATSEILETGIKVIDLLVPYVKGGK 146

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       +S+   VGER RE  + + E      L K+ +
Sbjct: 147 IGLFGGAGVGKTVLVQELINNIAVHHGGLSVFAGVGERTREGNDLYYEMKASGVLDKTAL 206

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+ +T+AEYF  +   +VLL +D+I RF  +  E++   G +P 
Sbjct: 207 VFGQMNEPPGARMRVALSGLTMAEYFRDELNQDVLLFIDNIFRFTQAGSEVSALLGRMPS 266

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+ +L ERI  +   KG+IT++ +V V  D+  DP   +    LD   VL
Sbjct: 267 AVGYQPTLATEMGQLQERI--TSTRKGSITSIQAVYVPADDLTDPAPATTFIHLDAQTVL 324

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R++A  G YP +DPLAS SR+       +E  K+   +  ++ +F+E +DI  I     
Sbjct: 325 DRNIASLGIYPAIDPLASASRMLSADIVGEEHYKIAREVQRILQKFKELQDIIAI----L 380

Query: 398 GVDLILDK---AVHQVPIIYDFLKQ 419
           G+D + D+    V++   I +FL Q
Sbjct: 381 GMDELSDEDKNIVYRARKIRNFLSQ 405


>gi|71897237|ref|NP_001026562.1| ATP synthase subunit beta, mitochondrial precursor [Gallus gallus]
 gi|82082513|sp|Q5ZLC5|ATPB_CHICK RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|53130278|emb|CAG31468.1| hypothetical protein RCJMB04_6l18 [Gallus gallus]
          Length = 533

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 161/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     +K   TGI+V+
Sbjct: 137 IRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQKILVTGIKVV 195

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 196 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 254

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 255 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 314

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+ 
Sbjct: 315 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDL 372

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 373 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGPEHYDVARGVQKI 432

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 433 LQDYKSLQDIIAILG 447


>gi|260949645|ref|XP_002619119.1| ATP synthase beta chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
 gi|238846691|gb|EEQ36155.1| ATP synthase beta chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
          Length = 415

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 164/307 (53%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +     +  I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 29  LGRIINVVGEPIDERGPINSKKRN-PIHTEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 87

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    ++
Sbjct: 88  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMQETGVINF 146

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 204

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGALQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +    E   + S++   +  ++  +
Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGKEHYDVASNVQQTLQAYKSLQ 322

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 323 DIIAILG 329


>gi|189485467|ref|YP_001956408.1| F0F1-type ATP synthase beta subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287426|dbj|BAG13947.1| F0F1-type ATP synthase beta subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 470

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 172/305 (56%), Gaps = 20/305 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR+ N LG+PID   +LGK D S++   I    P  M+++   +  +TGI+VID+ +P 
Sbjct: 92  LGRIFNVLGEPID---ALGKIDDSVKRHPIHRAAPAFMDQKTSPEMLETGIKVIDLVSPF 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCF---DKVIISLVGERGRE----VREFIEDYLG 211
             G +IG+F G+G+GK+ ++    R+         + + VGER RE      E +E  + 
Sbjct: 149 TKGGKIGIFGGAGVGKTVIVKELIRNIAAVHKGHSVFAGVGERTREGTDLWMEMVESKVM 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K+V+V    +E P  R    LTA+T++EYF   KG++VLL +D+I RFA +  E++
Sbjct: 209 D---KTVLVFGQMNEPPGNRMRVALTALTMSEYFRDEKGEDVLLFIDNIFRFAQAGSEVS 265

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  L ERI  +   KG++T+V +V V  D++ DP   ++ +
Sbjct: 266 ALLGRMPSAVGYQPNLAKDMGDLQERI--TSTNKGSVTSVQAVYVPADDYTDPAPVAIFA 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  + L+RS+ E+G YP V+PL S SRL D      D      S+  ++ ++++ +DI
Sbjct: 324 HLDATLTLDRSIMEQGLYPAVNPLTSSSRLLDPNIIGEDHYNTAMSVKKILQKYKDLQDI 383

Query: 390 RLIGG 394
             I G
Sbjct: 384 IAILG 388


>gi|197124864|ref|YP_002136815.1| F0F1 ATP synthase subunit beta [Anaeromyxobacter sp. K]
 gi|220919582|ref|YP_002494886.1| ATP synthase F1, beta subunit [Anaeromyxobacter dehalogenans 2CP-1]
 gi|196174713|gb|ACG75686.1| ATP synthase F1, beta subunit [Anaeromyxobacter sp. K]
 gi|219957436|gb|ACL67820.1| ATP synthase F1, beta subunit [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 482

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 160/305 (52%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +     ++ I    P   +     + F+TGI+VID+  P   G 
Sbjct: 97  GRILNVVGEPVDERGPVA-ATRTLPIHRAAPLLTDLNVKVEAFETGIKVIDLLAPYLRGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYL------GDN 213
           +IG+F G+G+GK+ LL     +    +   S+ G   ER RE  +   + +       D+
Sbjct: 156 KIGLFGGAGVGKTVLLMELVNNVAKKRGGFSVFGGVGERTREGNDLYHEMIEAGVINKDD 215

Query: 214 LKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L KS  V+V    +E P  R    L+A+T+AEYF   +  ++LL +D+I RF  +  E++
Sbjct: 216 LSKSQCVLVYGQMNEPPGARARVALSALTVAEYFRDVENRDMLLFIDNIFRFTQAGSEVS 275

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG IT+V ++ V  D+  DP   +  +
Sbjct: 276 ALLGRIPSAVGYQPTLSTEMGELQERI--TSTQKGAITSVQAIYVPADDLTDPAPATAFA 333

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VLNR L E G YP VDPL S SR+ D      E   V+ ++   + R+++ +DI
Sbjct: 334 HLDATTVLNRKLTEIGIYPAVDPLDSTSRILDPNVVGQEHYAVARAVQETLQRYKDLQDI 393

Query: 390 RLIGG 394
             I G
Sbjct: 394 IAILG 398


>gi|158524728|gb|ABW71258.1| mitochondrial ATP synthase beta subunit [Flustra foliacea]
          Length = 428

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 160/306 (52%), Gaps = 19/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+ ID    L     +  I  + P  +     ++  +TGI+V+D+  P C G 
Sbjct: 65  GRIINVIGELIDERGPL-NAKATSGIHQEAPEFVEMSVEQEILETGIKVVDLLAPYCKGG 123

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE    D  
Sbjct: 124 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 182

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD  K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 183 GDKSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D      E   +   +  ++  ++  +D
Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDANIVGHEHYNIARGVQKILQNYKSLQD 359

Query: 389 IRLIGG 394
           I  I G
Sbjct: 360 IIAILG 365


>gi|49474710|ref|YP_032752.1| F0F1 ATP synthase subunit beta [Bartonella quintana str. Toulouse]
 gi|81827581|sp|Q6FYM3|ATPB_BARQU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49240214|emb|CAF26682.1| ATP synthase beta chain [Bartonella quintana str. Toulouse]
          Length = 536

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 22/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +     +  I  K P  +++    +   TGI+V+D+  P  
Sbjct: 141 ATLGRIMNVIGEPVDNVGPIATTK-TRSIHQKAPEYVDQSTASEILVTGIKVVDLLAPYS 199

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G ++G+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  + 
Sbjct: 200 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 258

Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            N K         K  +V    +E P  R    L+ +TIAE F  +G +VL  +D+I RF
Sbjct: 259 VNPKDNNGSTKGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRF 318

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  D
Sbjct: 319 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTD 376

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381
           P   +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ 
Sbjct: 377 PAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLVVGEEHYTVACQVQTILQ 436

Query: 382 RFEETRDIRLIGG 394
           R+   +DI  I G
Sbjct: 437 RYRSLQDIIAILG 449


>gi|307244067|ref|ZP_07526186.1| ATP synthase F1, beta subunit [Peptostreptococcus stomatis DSM
           17678]
 gi|306492591|gb|EFM64625.1| ATP synthase F1, beta subunit [Peptostreptococcus stomatis DSM
           17678]
          Length = 466

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 159/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GRV N LG+ ID    + +G +S+  + K  PA +    +    +TGI+V+D+  P   
Sbjct: 88  LGRVFNVLGEAID-LKPMPEG-VSLSPIHKEAPAYDELETKAEILETGIKVVDLLAPYLK 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      + K
Sbjct: 146 GGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMTESGVINK 205

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LT +T+AE+F   +G +VLL +D+I RF  +  E++   G 
Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTMAEHFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGR 265

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD  
Sbjct: 266 MPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 323

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R ++  G YP VDPL S SR+ D      E  ++   +  ++ R+ E +DI  I G
Sbjct: 324 TVLSRQISSLGIYPAVDPLESTSRVLDPNIVGKEHYEVARGVQSILQRYRELQDIIAILG 383


>gi|224372095|ref|YP_002606467.1| V-type ATP synthase subunit B [Nautilia profundicola AmH]
 gi|223589167|gb|ACM92903.1| V-type ATP synthase beta chain [Nautilia profundicola AmH]
          Length = 442

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 158/294 (53%), Gaps = 10/294 (3%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           FH    +I+ S    G+ ++A   PIDG  +    + D+++       PA  R+  +   
Sbjct: 71  FHLKPLKINLSENMVGKTLDAFANPIDGIMESVEKESDINL---GAYNPAY-REYPKNII 126

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVR 203
            TG   ID    L  GQ++ +FA SG+     ++  A         +I++ +G R  E  
Sbjct: 127 VTGFSAIDALNTLVKGQKLPIFALSGLKNDEFVAKLATQISIKNSLIILAAIGMR-FERA 185

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRF 262
           +++ + + +   +  V +  ++E  I   + P TA+T AEY +  KG NV++IL  +T +
Sbjct: 186 QYLINSISNKSSQITVFLNLANEPTINSLLLPRTALTFAEYMAFEKGKNVIVILYDMTNY 245

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A+++REI++   E+P  +GYP  ++S+L  + ER G  + +KG+IT +  + +  D+   
Sbjct: 246 ANALREISSKKEEIPGKKGYPGYMYSDLASIYERAGIIKGKKGSITQIPVLTLPDDDITH 305

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           PIAD    I +G IV +RSL ++G +PP+D L+S+SRL + A  +  K+  S L
Sbjct: 306 PIADLSGYITEGQIVFSRSLHKKGIFPPIDVLSSLSRLMNSAIDSTHKRFASQL 359


>gi|326332919|ref|ZP_08199176.1| ATP synthase F1, beta subunit [Nocardioidaceae bacterium Broad-1]
 gi|325949277|gb|EGD41360.1| ATP synthase F1, beta subunit [Nocardioidaceae bacterium Broad-1]
          Length = 478

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 153/298 (51%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NA G  +D D S  +      I  K P     +   + F+TGI+VID+ TP   G 
Sbjct: 98  GHVFNATGDILDVDPSTVEVKERWGIHRKAPAFDQLESKTQMFETGIKVIDLLTPYVTGG 157

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           +IG+F G+G+GK+ L+  M AR   +     + + VGER RE  + I +     +  K  
Sbjct: 158 KIGLFGGAGVGKTVLIQEMIARVAKNHGGVSVFAGVGERTREGNDLIHEMQEAGVYDKVA 217

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +     DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G +P
Sbjct: 218 LTFGQMDEPPGTRLRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 277

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 278 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 335

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR+ D  +   D       +  ++ R +E +DI  I G
Sbjct: 336 LSREIASLGIYPAVDPLTSTSRILDPQYIGQDHYDCAVRVKQILQRNKELQDIIAILG 393


>gi|114565195|ref|YP_752709.1| F0F1 ATP synthase subunit beta [Shewanella frigidimarina NCIMB 400]
 gi|122298241|sp|Q07VU4|ATPB1_SHEFN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|114336488|gb|ABI73870.1| ATP synthase F1, beta subunit [Shewanella frigidimarina NCIMB 400]
          Length = 463

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 14/303 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +  + I    P   ++    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGEPIDEAGPIGEEERYV-IHRAAPSYEDQSNSTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGD 212
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F   +ED    
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SG 200

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L K  +V    +E P  R    LT ++IAE F  +G +VLL +D+I R+  +  E++  
Sbjct: 201 VLDKVAMVYGQMNEPPGNRLRVALTGLSIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSAL 260

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + L
Sbjct: 261 LGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHL 318

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D  +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  
Sbjct: 319 DATVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDIIA 378

Query: 392 IGG 394
           I G
Sbjct: 379 ILG 381


>gi|307327919|ref|ZP_07607101.1| ATP synthase F1, beta subunit [Streptomyces violaceusniger Tu 4113]
 gi|306886437|gb|EFN17441.1| ATP synthase F1, beta subunit [Streptomyces violaceusniger Tu 4113]
          Length = 481

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LGK ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 102 GRVFNTLGKILNDPEAESEVTERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R     +   + + VGER RE  + IE+      L ++ 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMIMRVAKLHEGVSVFAGVGERTREGNDLIEEMAESGVLPQTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +V + LD    
Sbjct: 282 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPANVFAHLDATTT 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
           L+R ++E+G YP VDPL S SR+ D  + S +     S +  ++ ++++ +DI
Sbjct: 340 LSRPISEKGIYPAVDPLDSTSRILDPRYISQEHYDCASRVKSILQKYKDLQDI 392


>gi|296802110|gb|ADH51553.1| mitochondrial H+-transporting ATP synthase F1 complex beta
           polypeptide [Cynopterus sphinx]
          Length = 399

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 149/280 (53%), Gaps = 16/280 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 119 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 177

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 178 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 236

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 237 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 296

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 297 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 354

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + LD   VL+R++AE G YP VDPL S SR+ D     +E
Sbjct: 355 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNE 394


>gi|21244374|ref|NP_643956.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|294667261|ref|ZP_06732481.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325924759|ref|ZP_08186196.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans
           91-118]
 gi|81860488|sp|Q8PGG7|ATPB_XANAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21110032|gb|AAM38492.1| ATP synthase beta chain [Xanthomonas axonopodis pv. citri str. 306]
 gi|292602933|gb|EFF46364.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325544851|gb|EGD16197.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans
           91-118]
          Length = 468

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|269914683|gb|ACJ06633.2| mitochondrial F1-ATPase beta subunit [Dimocarpus longan]
          Length = 558

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 17/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID      K D  + I  + P  + +   ++   TGI+V+D+  P  
Sbjct: 166 ATLGRIMNVIGEPIDEKGEF-KTDHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 224

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---Y 209
            G +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE     
Sbjct: 225 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIK 284

Query: 210 LGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
           LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  + 
Sbjct: 285 LGDKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQAN 344

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   
Sbjct: 345 SEVSALLGRIPSAVGYQPTLSTDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 402

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R ++E G YP VDPL S SR L+      +      ++  ++  ++ 
Sbjct: 403 TTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPNILGEEHYNTARAVQKVLQNYKN 462

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 463 LQDIIAILG 471


>gi|260771027|ref|ZP_05879955.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|260613916|gb|EEX39107.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|315178661|gb|ADT85575.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
          Length = 467

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  +L   I  + P    +    +  +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDERGEIGAEEL-YSIHREAPSYEEQSNATELLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +     
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNIEK 204

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   +   +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|50307119|ref|XP_453538.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1703697|sp|P49376|ATPB_KLULA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|1255776|gb|AAA96150.1| F1 ATPase beta subunit [Kluyveromyces lactis]
 gi|49642672|emb|CAH00634.1| KLLA0D10703p [Kluyveromyces lactis]
          Length = 505

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +    +   I +  P  + +    +  +TGI+V+D+  P   G
Sbjct: 119 LGRIINVIGEPIDERGPI-NSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARG 177

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 178 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 236

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 237 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 294

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 295 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 352

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  +
Sbjct: 353 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATQVQQTLQAYKSLQ 412

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 413 DIIAILG 419


>gi|94271708|ref|ZP_01292004.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [delta proteobacterium MLMS-1]
 gi|93450366|gb|EAT01584.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [delta proteobacterium MLMS-1]
          Length = 194

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 109/169 (64%), Gaps = 1/169 (0%)

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +V+L++DS+TR+A S RE+    GE P +RGY  SVF +LP+LLER G  +  KG+IT +
Sbjct: 5   DVVLMMDSVTRYAMSSREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSITGI 63

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+ N+PIAD+VRSI+DGHIVL+R LA +G YP ++   SVSR      SA++ 
Sbjct: 64  FTVLVEGDDMNEPIADAVRSIVDGHIVLSRDLAGQGHYPAIEVSGSVSRCMSDVASAEQI 123

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +       +I  +  + D+  IG Y  G +  +D A+  +  +  +L+Q
Sbjct: 124 EAAHRFLEIISLYRRSEDLINIGAYAKGSNPKIDNAIAMIDQLNGYLRQ 172


>gi|254488474|ref|ZP_05101679.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101]
 gi|214045343|gb|EEB85981.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101]
          Length = 465

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 158/295 (53%), Gaps = 13/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+++  G P+DG  S     +    + + PP + +R    +  +TGI+ ID+ +P+  G
Sbjct: 92  GRMLDVFGAPMDGRPS--PQAVERRSIHQAPPQLSDRVLHAQILETGIKAIDLLSPIERG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKK 216
            + G+F G+G+GK+ L++    +       +SL   +GER RE  E   + +GD     K
Sbjct: 150 GKTGLFGGAGVGKTVLITELINNTVQHYKGVSLFCGIGERSREAEELYRE-IGDAGVRDK 208

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           +V++    +E+P +R +   TA+T+AEYF    G +VLL++D+I RF  +  E++   G 
Sbjct: 209 TVMLFGQMNEAPGVRFLVGNTALTMAEYFRDDLGQDVLLLIDNIFRFVQAGSEVSGLMGR 268

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ +EL  L ERI  +   +  IT++ +V V  D+  DP A  + S L   
Sbjct: 269 MPSRVGYQPTLATELAALEERI--TSTSQAAITSIQAVYVPADDFTDPAAAHIFSHLSAS 326

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           +VL+R  A EG YP VDPLAS S +   A        +  ++   +  +EE RDI
Sbjct: 327 VVLSRKRASEGLYPSVDPLASASVMLTPAVVGQRHYDIARAVRRTLSEYEELRDI 381


>gi|115465323|ref|NP_001056261.1| Os05g0553000 [Oryza sativa Japonica Group]
 gi|84028177|sp|Q01859|ATPBM_ORYSJ RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|49328022|gb|AAT58723.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
 gi|50878425|gb|AAT85199.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
 gi|113579812|dbj|BAF18175.1| Os05g0553000 [Oryza sativa Japonica Group]
 gi|215692634|dbj|BAG88054.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 552

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 160 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 214

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 215 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 273

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 274 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 333

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 334 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 391

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 392 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 451

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 452 QNYKNLQDIIAILG 465


>gi|86160763|ref|YP_467548.1| F0F1 ATP synthase subunit beta [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|118573504|sp|Q2IHQ2|ATPB_ANADE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|85777274|gb|ABC84111.1| ATP synthase F1 subcomplex beta subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 482

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 160/305 (52%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +     ++ I    P   +     + F+TGI+VID+  P   G 
Sbjct: 97  GRILNVVGEPVDERGPVAATK-TLPIHRSAPLLTDLNVKVESFETGIKVIDLLAPYLRGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYL------GDN 213
           +IG+F G+G+GK+ LL     +    +   S+ G   ER RE  +   + +       D+
Sbjct: 156 KIGLFGGAGVGKTVLLMELVNNVAKKRGGFSVFGGVGERTREGNDLYHEMIEAGVINKDD 215

Query: 214 LKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L KS  V+V    +E P  R    L+A+T+AEYF   +  ++LL +D+I RF  +  E++
Sbjct: 216 LSKSQCVLVYGQMNEPPGARARVALSALTVAEYFRDVENRDMLLFIDNIFRFTQAGSEVS 275

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG IT+V ++ V  D+  DP   +  +
Sbjct: 276 ALLGRIPSAVGYQPTLSTEMGELQERI--TSTQKGAITSVQAIYVPADDLTDPAPATAFA 333

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VLNR L E G YP VDPL S SR+ D      E   V+ ++   + R+++ +DI
Sbjct: 334 HLDATTVLNRKLTEIGIYPAVDPLDSTSRILDPNVVGKEHYAVARAVQETLQRYKDLQDI 393

Query: 390 RLIGG 394
             I G
Sbjct: 394 IAILG 398


>gi|46909263|gb|AAT06149.1| ATP synthase beta subunit [Saccoglossus kowalevskii]
          Length = 427

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 149/273 (54%), Gaps = 18/273 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +   D    I  + P  +  +  ++  +TGI+ +D+  P C G 
Sbjct: 65  GRIINVIGEPIDERGPI-PTDRRSGIHQEAPEFVEMKVEQEILETGIKWVDLLAPYCKGG 123

Query: 163 RIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L    ++  A++     V    VGER RE      E IE    D  
Sbjct: 124 KIGLFGGAGVGKTVLFLELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIDLK 182

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD  K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 183 GDGSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332


>gi|113170421|ref|YP_717213.1| AtpB [Ostreococcus tauri]
 gi|118573712|sp|Q0P3P2|ATPB_OSTTA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112806828|emb|CAL36335.1| AtpB - contains Intron II [Ostreococcus tauri]
          Length = 483

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 19/308 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D   ++   +  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 98  GRIFNVLGEPVDELGAVSTPEGMLPIHRAAPAFVDLDTNLSIFETGIKVVDLLAPYRRGG 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYLGD- 212
           +IG+F G+G+GK+ L+     ++   K      + + VGER RE     +E  E  + D 
Sbjct: 158 KIGLFGGAGVGKTVLIMELIVNNNIAKAHGGVSVFAGVGERTREGNDLYQEMCESKVIDT 217

Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 218 ANLANSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFVDNIFRFVQAGSE 277

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 278 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPAPATT 335

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W    D       +   + R++E 
Sbjct: 336 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDDHYDTAQGVKQTLQRYKEL 394

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 395 QDIIAILG 402


>gi|319997188|gb|ADV91188.1| mitochondrial ATP synthase F1 beta subunit-like protein 1
           [Karlodinium micrum]
          Length = 514

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 156/316 (49%), Gaps = 20/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R+       GR+IN +G+PID    LG  D   S  I    P             TGI+V
Sbjct: 116 RVPVGEGTLGRIINIIGEPID---ELGPIDSNKSYPIHRPAPVFTEMNTSAAQLLTGIKV 172

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIED 208
           +D+  P   G +IG+F G+G+GK+ ++     +         + + VGER RE  +   +
Sbjct: 173 VDLLAPYAKGGKIGLFGGAGVGKTVVIMELIHNIALKHGGYSVFAGVGERTREGNDLYHE 232

Query: 209 YLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
            +   +         K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I
Sbjct: 233 MMASGVIKENKAPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFVDNI 292

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V +V V  D+
Sbjct: 293 FRFTQAGSEVSALLGRIPSAVGYQPTLATDLASLQERI--TTTQKGSITSVQAVYVPADD 350

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH- 378
             DP   +  + LD   VL+R +AE G YP VDPL S SR+ D +        V+  T  
Sbjct: 351 LTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPSIVGQRHYDVARSTQK 410

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 411 ILQDYKSLQDIIAILG 426


>gi|296802108|gb|ADH51552.1| mitochondrial H+-transporting ATP synthase F1 complex beta
           polypeptide [Miniopterus fuliginosus]
          Length = 486

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 115 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 173

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 174 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 232

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 233 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 292

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 293 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 350

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 351 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 410

Query: 389 IRLIGG 394
           I  I G
Sbjct: 411 IIAILG 416


>gi|288816879|gb|ADC55252.1| mitochondrial ATP synthase subunit beta precursor [Litopenaeus
           vannamei]
          Length = 525

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +     S  I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 139 GRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKGG 197

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L 
Sbjct: 198 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISLK 256

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 257 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 316

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 317 ALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 374

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S+SR+ D      E   V+ S+  ++   +  +DI
Sbjct: 375 HLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQDI 434

Query: 390 RLIGG 394
             I G
Sbjct: 435 IAILG 439


>gi|23503631|dbj|BAC20412.1| ATP synthase beta-subunit [Gungnir neglectum]
          Length = 376

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + ++ I  + P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVQANSTLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R+
Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYASAQSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|84494526|ref|ZP_00993645.1| ATP synthase subunit B [Janibacter sp. HTCC2649]
 gi|84384019|gb|EAP99899.1| ATP synthase subunit B [Janibacter sp. HTCC2649]
          Length = 487

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 19/305 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGD-----LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
            G+V N  G+ ++    L +G+     L   I  K P     +   + F+TGI++ID+ T
Sbjct: 105 LGKVFNTTGEVMN----LAEGETFEPSLRWGIHRKAPAFDQLESKTEMFETGIKIIDLMT 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGD 212
           P   G +IG+F G+G+GK+ L+  M AR   D     + + VGER RE  +  +E     
Sbjct: 161 PYVQGGKIGLFGGAGVGKTVLIQEMIARVARDHGGVSVFAGVGERTREGNDLMVEMEEAG 220

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            L ++ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 221 VLGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 280

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN-ITAVISVLVDGDNHNDPIADSVRS 330
             G +P A GY  ++  E+  L ERI  +   +GN IT++ ++ V  D++ DP   +  +
Sbjct: 281 LLGRMPSAVGYQPTLADEMGTLQERITST---RGNSITSMQAIYVPADDYTDPAPATTFA 337

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDI 389
            LD    L+R +A  G YP VDPL S SR+ D+ + A D       +  ++ R +E +DI
Sbjct: 338 HLDATTELSREIASLGIYPAVDPLTSTSRILDRRYIAEDHYNTAVRIKSILQRNKELQDI 397

Query: 390 RLIGG 394
             I G
Sbjct: 398 IAILG 402


>gi|77920579|ref|YP_358394.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380]
 gi|123729376|sp|Q3A083|ATPB2_PELCD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|77546662|gb|ABA90224.1| ATP synthase F1, beta subunit [Pelobacter carbinolicus DSM 2380]
          Length = 474

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 9/293 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N  G+PID  +    G     +++K      R    + F TGI+ ID+  PL  G 
Sbjct: 89  GRVFNVFGQPIDRREP-PDGCRWRSVLTKPAGLTERSSKTEMFITGIKAIDVLAPLERGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ L++    +       +SL   +GER RE  E F E      L  +V
Sbjct: 148 KAGLFGGAGVGKTVLITELIHNMVGQHEGVSLFCGIGERCREGEELFREMREAGVLDNTV 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LTA+T+AEYF   +G +VLL++D+I RF  +  EI+   G +P
Sbjct: 208 MVFGQMNEPPGARFRVGLTALTMAEYFRDDQGRDVLLLIDNIFRFIQAGMEISGLLGLMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL  L ERI  S      IT++ +V V  D+  DP A    S L   IV
Sbjct: 268 SRLGYQPTMGTELAELQERI--SSTRHAAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP +DPLAS S + +     +   +L   +   +  +EE +DI
Sbjct: 326 LSRRRASEGLYPAIDPLASTSNILNPRIVGERHYRLAQEIRRTLATYEELKDI 378


>gi|23503617|dbj|BAC20405.1| ATP synthase beta-subunit [Chlamydomonas tetragama]
          Length = 376

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + +G+ ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNLGPVKQGE-TLPIHRQAPLFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK  +   S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYQTAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|318042250|ref|ZP_07974206.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CB0101]
          Length = 486

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I  + P   + +   K F+TGI+VID+  P  
Sbjct: 95  ATLGRIFNVLGEPVDEQGPVST-TTTAPIHREAPKLTDLETKPKVFETGIKVIDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +   +S+   VGER RE  +  E++       
Sbjct: 154 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFAGVGERTREGNDLYEEFKESGVIN 213

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 214 PDDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|307294136|ref|ZP_07573980.1| ATP synthase F1, beta subunit [Sphingobium chlorophenolicum L-1]
 gi|306880287|gb|EFN11504.1| ATP synthase F1, beta subunit [Sphingobium chlorophenolicum L-1]
          Length = 481

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 21/313 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + +  LS  I +K P  +++        TGI+VID+  P  
Sbjct: 86  ATLGRILNVVGEPIDERGPV-ETTLSAPIHAKAPEFVDQSTDASILVTGIKVIDLLAPYA 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         + + VGER RE  +   ++L   +  
Sbjct: 145 KGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHEFLDAGVIA 204

Query: 215 -----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
                       K  +V    +E P  R    L+ +TIAEYF   +G +VL  +D+I RF
Sbjct: 205 KDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYFRDQEGQDVLFFVDNIFRF 264

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  D
Sbjct: 265 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTD 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VLNR+++E G YP VDPL S SR L  +    +  +   ++  ++ 
Sbjct: 323 PAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARAVQAILQ 382

Query: 382 RFEETRDIRLIGG 394
           +++  +DI  I G
Sbjct: 383 KYKSLQDIIAILG 395


>gi|91178104|gb|ABE27287.1| mitochondrial F-ATPase beta subunit [Candida catenulata]
          Length = 337

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 166/310 (53%), Gaps = 28/310 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158
           GR+IN +G+PID      +G +  +  + +   PP+   Q VE +  +TGI+V+D+  P 
Sbjct: 20  GRIINVVGEPIDE-----RGPIQCKQRNPIHAEPPSFTEQSVEAEVLETGIKVVDLLAPY 74

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE--- 207
             G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E   
Sbjct: 75  ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV 133

Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            +  GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +
Sbjct: 134 INLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQA 191

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP  
Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SRL D +    +   + + +   +  ++
Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVEVVGQEHYDVATGVQECLQAYK 309

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 310 SLQDIIAILG 319


>gi|300932367|ref|ZP_07147632.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1]
 gi|300459872|gb|EFK23365.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1]
          Length = 460

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP V PL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 320 VVLSRQIASLGIYPAVAPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379


>gi|294101807|ref|YP_003553665.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM
           12261]
 gi|293616787|gb|ADE56941.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM
           12261]
          Length = 473

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 175/351 (49%), Gaps = 18/351 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I  D  +V +     G +I    L F      +  S    GR+ N  G+PIDG  
Sbjct: 43  GRVLEITSDRALVQVFEGTDGIDIKNTKLRFLGKVLTLPVSRDMLGRIFNGRGEPIDGGA 102

Query: 118 S-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L    L +  M   P   +R    +  +TGI  ID   P+  GQ++ +F+GSG+  + 
Sbjct: 103 PILPDAKLDINGMPMNP--FSRDYPSEFIQTGISTIDGMNPMVRGQKLPIFSGSGLPHNR 160

Query: 177 LLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           + +  AR            V+ + +G    E   F+ED+     ++++V+ V  +D+  I
Sbjct: 161 MAAQIARQATVISGHEDFAVVFAAMGITFEEASFFMEDFRRTGAIQRTVMFVNLADDPAI 220

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY + + D +V++IL  +T +  ++REI+    E+P  RGYP  +++
Sbjct: 221 ERITTPRLALTAAEYLAFEQDMHVVVILTDLTNYCEALREISAARKEVPGRRGYPGYLYT 280

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  + +KG+IT +  + +  D+   PI D    I +G I+L+R L  +G Y
Sbjct: 281 DLATMYERAGRLKGKKGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRGLHRKGIY 340

Query: 349 PPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           PPVD + S+SRL DK         D   L++ L     R +E +++ +I G
Sbjct: 341 PPVDVMPSLSRLKDKGIGREKTREDHADLMNQLFAAYARGKEAKELAVILG 391


>gi|294012671|ref|YP_003546131.1| F-type H+-transporting ATPase beta chain [Sphingobium japonicum
           UT26S]
 gi|292676001|dbj|BAI97519.1| F-type H+-transporting ATPase beta chain [Sphingobium japonicum
           UT26S]
          Length = 481

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 21/313 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + +  LS  I +K P  +++        TGI+VID+  P  
Sbjct: 86  ATLGRILNVVGEPIDERGPV-ETTLSAPIHAKAPEFVDQSTDASILVTGIKVIDLLAPYA 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         + + VGER RE  +   ++L   +  
Sbjct: 145 KGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHEFLDAGVIA 204

Query: 215 -----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
                       K  +V    +E P  R    L+ +TIAEYF   +G +VL  +D+I RF
Sbjct: 205 KDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYFRDQEGQDVLFFVDNIFRF 264

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  D
Sbjct: 265 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTD 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VLNR+++E G YP VDPL S SR L  +    +  +   ++  ++ 
Sbjct: 323 PAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARAVQAILQ 382

Query: 382 RFEETRDIRLIGG 394
           +++  +DI  I G
Sbjct: 383 KYKSLQDIIAILG 395


>gi|148223359|ref|NP_001080126.1| mitochondrial ATP synthase beta subunit [Xenopus laevis]
 gi|28436792|gb|AAH46741.1| Atp5b protein [Xenopus laevis]
          Length = 525

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 16/282 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 129 IRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 187

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 188 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 246

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 247 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 306

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 307 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 364

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D
Sbjct: 365 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 406


>gi|226487050|emb|CAX75390.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Schistosoma japonicum]
          Length = 517

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 164/305 (53%), Gaps = 28/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PID      +G +  ++MS +    P  ++    ++  +TGI+V+D+  P 
Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206
             G +IG+F G+G+GK+ L+    +  AR+     V    VGER RE  +         +
Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            D  G+N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 304 GSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +  + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+     I   +E
Sbjct: 362 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSVARGVQKI--LQE 419

Query: 386 TRDIR 390
            R ++
Sbjct: 420 NRSLQ 424


>gi|194751241|ref|XP_001957935.1| GF23766 [Drosophila ananassae]
 gi|190625217|gb|EDV40741.1| GF23766 [Drosophila ananassae]
          Length = 638

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R++      GR++N +G PID  + + K +    I ++ P  ++     +   TGI+VI
Sbjct: 178 IRVAVGKSVLGRILNVVGDPIDDREPI-KSEFYSFIHNEAPELVDLTVKPEILVTGIKVI 236

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE      E
Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295

Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D+  K V+V    +E P  R    LT +TIAEYF    G +VLL +D+I 
Sbjct: 296 MIESKVISLEDDTSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDMDGQDVLLFIDNIF 355

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+ 
Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
           +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   
Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDIVGEEHYNVARAVQKT 473

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 474 LQSYKSLQDIIAILG 488


>gi|170747037|ref|YP_001753297.1| F0F1 ATP synthase subunit beta [Methylobacterium radiotolerans JCM
           2831]
 gi|170653559|gb|ACB22614.1| ATP synthase F1, beta subunit [Methylobacterium radiotolerans JCM
           2831]
          Length = 484

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 159/311 (51%), Gaps = 25/311 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+PID    +     +   + +  P+   Q  E     TGI+V+D+  P   G
Sbjct: 96  GRIMNVIGEPIDEAGPVQA--TTYRAIHQPAPSYAEQSTEAQILVTGIKVVDLLAPYAKG 153

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYLGD 212
            +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +  
Sbjct: 154 GKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESKVNV 211

Query: 213 NLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           + K        K  +V    +ESP  R    LT +TIAE F   G +VL  +D+I RF  
Sbjct: 212 DPKEHGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEQFRDDGQDVLFFVDNIFRFTQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 272 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             +  + LD   VL+RS+AE+G YP VDPL S SR+   A   +E   V+  +   + R+
Sbjct: 330 PAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAILGEEHYDVARRVQQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 390 KALQDIIAILG 400


>gi|91178114|gb|ABE27292.1| mitochondrial F-ATPase beta subunit [Candida haemulonis]
          Length = 337

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 163/307 (53%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K      I +  P  + +    +  +TGI+V+D+  P   G
Sbjct: 19  LGRIINVIGEPIDERGPI-KSKKRNPIHTDPPTFVEQSTSAEVLETGIKVVDLLAPYARG 77

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    ++
Sbjct: 78  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMQETGVINF 136

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 194

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGTLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +    E   + +++   +  ++  +
Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGKEHYDVATNVQQTLQAYKSLQ 312

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 313 DIIAILG 319


>gi|89257058|ref|YP_514420.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315414|ref|YP_764137.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503268|ref|YP_001429333.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009445|ref|ZP_02274376.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368297|ref|ZP_04984316.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
           257]
 gi|254369895|ref|ZP_04985904.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022]
 gi|290953659|ref|ZP_06558280.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312976|ref|ZP_06803685.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|118573537|sp|Q2A1I2|ATPB_FRATH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122324600|sp|Q0BK84|ATPB_FRATO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201704|sp|A7NEH4|ATPB_FRATF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|89144889|emb|CAJ80234.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130313|gb|ABI83500.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254106|gb|EBA53200.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
           257]
 gi|156253871|gb|ABU62377.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157122865|gb|EDO66982.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022]
          Length = 458

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 159/300 (53%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N LG+PID    +   +     + + PPA +   +     +TGI+V+D+  P   
Sbjct: 83  LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           G ++G+F G+G+GK+     L++  A+      V  S VGER RE  +F  +    N L 
Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVF-SGVGERTREGNDFYYEMKYSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    L+ +TIAE F  +  +VL+ +D+I R+  +  E++   G 
Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  
Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           IVL+R +AE G YP VDPL S SR  D      D  +   ++  ++ R++E +DI  I G
Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 377


>gi|54113605|gb|AAV29436.1| NT02FT1772 [synthetic construct]
          Length = 458

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 12/299 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N LG+PID    +   +     + + PPA +   +     +TGI+V+D+  P   G
Sbjct: 84  GRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    L+ +TIAE F  +  +VL+ +D+I R+  +  E++   G +
Sbjct: 201 VSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRM 260

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  I
Sbjct: 261 PSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATI 318

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR  D      D  +   ++  ++ R++E +DI  I G
Sbjct: 319 VLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 377


>gi|33519491|ref|NP_878323.1| F0F1 ATP synthase subunit beta [Candidatus Blochmannia floridanus]
 gi|81666731|sp|Q7VQV6|ATPB_BLOFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33517154|emb|CAD83536.1| ATP synthase beta subunit [Candidatus Blochmannia floridanus]
          Length = 464

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG PID    +   +    I    P        ++   TGI+VID+  P   G 
Sbjct: 90  GRVMDVLGNPIDMKGPINSIE-KWSIHRSAPLYEELSSNQELLITGIKVIDLMCPFIKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+  +    R+   +    S+   VGER RE  +F  + +    L K  
Sbjct: 149 KIGLFGGAGVGKTVNIMELIRNIAIEHAGYSVFVGVGERIREGNDFYHEMIHSGILDKVA 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P 
Sbjct: 209 LVYGQMNEPPGNRLRVALTGLTIAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRVPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY +++  E+  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD  IVL
Sbjct: 269 AVGYQSTLSEEMGMLQERIAST--KSGSITSVQAIYVPADDLTDPSPTTTFAHLDATIVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S S+  D      E   + +++  ++ R++E +DI  I G
Sbjct: 327 SRQIAALGIYPAVDPLDSYSKQLDPCIVGQEHYDIANNVKSILQRYQELKDIIAILG 383


>gi|326492854|dbj|BAJ90283.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 554

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 162/313 (51%), Gaps = 25/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      KGD+     + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 163 ATLGRIINVIGEPIDH-----KGDIKTHDYLPIHREAPAFVEQATEQQILVTGIKVVDLL 217

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE 
Sbjct: 218 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 277

Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
               L D   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF
Sbjct: 278 GVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 337

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 338 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 395

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+RS++E G YP VDPL S SR L+      D       +  ++ 
Sbjct: 396 PAPATTFAHLDATTVLSRSISELGIYPAVDPLDSTSRMLSPHVLGMDHYNTARGVQKVLQ 455

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 456 NYKNLQDIIAILG 468


>gi|328954799|ref|YP_004372132.1| ATP synthase F1 subcomplex beta subunit [Coriobacterium glomerans
           PW2]
 gi|328455123|gb|AEB06317.1| ATP synthase F1 subcomplex beta subunit [Coriobacterium glomerans
           PW2]
          Length = 484

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 168/329 (51%), Gaps = 15/329 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+DG  + G+ +    I    P         + F+TGI+ +D+  P  
Sbjct: 104 ATLGRIWNVLGEPVDGKPA-GQIEERYPIHHAAPTFDELTTNMEIFETGIKAVDLLEPYI 162

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            G + G+F G+G+GK+ L+     +         + + VGER RE  + ++E      L 
Sbjct: 163 RGGKTGLFGGAGVGKTVLIQELIYNLAQQHGGTSVFTGVGERTREGTDLYLEMKESGVLD 222

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K+ +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G 
Sbjct: 223 KTCLVYGQMNEPPGARLRVGLAGLTTAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGR 282

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 283 MPSAVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDST 340

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            VL+R++A  G YP +DPLAS S   D     +    V+S +  L+ ++ + +DI  I  
Sbjct: 341 TVLSRNIASLGLYPAIDPLASTSDALDPDIVGERHYSVASKVQELLQQYADLQDIIAI-- 398

Query: 395 YRPGVDLILDK---AVHQVPIIYDFLKQS 420
              G+D + D+    V++   I  FL QS
Sbjct: 399 --LGMDELSDEQRTTVNRARKIQQFLSQS 425


>gi|171060196|ref|YP_001792545.1| F0F1 ATP synthase subunit beta [Leptothrix cholodnii SP-6]
 gi|170777641|gb|ACB35780.1| ATP synthase F1, beta subunit [Leptothrix cholodnii SP-6]
          Length = 474

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 160/314 (50%), Gaps = 29/314 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID      +G +SME    I  K P        +   +TGI+VID+ 
Sbjct: 89  ATLGRIMDVLGNPIDE-----RGPVSMELSASIHRKAPAYDELSPSQDLLETGIKVIDLI 143

Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY-- 209
            P   G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +   
Sbjct: 144 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMAD 202

Query: 210 --------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
                   LG++  K  +V    +E P  R    LT +TIAE F  +G +VL  +D+I R
Sbjct: 203 SGVVNLESLGES--KVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 260

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  
Sbjct: 261 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLT 318

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     +E      ++  ++
Sbjct: 319 DPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSNSRQVDPNVVGEEHYNTTRAVQQVL 378

Query: 381 HRFEETRDIRLIGG 394
            R++E RDI  I G
Sbjct: 379 QRYKELRDIIAILG 392


>gi|71276027|ref|ZP_00652308.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon]
 gi|71899448|ref|ZP_00681606.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|170729691|ref|YP_001775124.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M12]
 gi|226740694|sp|B0U598|ATPB_XYLFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71163110|gb|EAO12831.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon]
 gi|71730761|gb|EAO32834.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|167964484|gb|ACA11494.1| Sodium-transporting two-sector ATPase [Xylella fastidiosa M12]
          Length = 466

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +   D   EI    P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEAGPITYTD-QWEIHRNAPSYEDQASTTELLETGIKVIDLMCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +TIAEYF      S KG +VLL +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTIAEYFRDEKDSSGKGKDVLLFIDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +    G+IT++ +V V  D+  DP   +   
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSITSIQAVYVPADDLTDPSPATTFG 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  + L+RS+A  G YP VDPL S SR  D     +E       +   + ++++ +DI
Sbjct: 319 HLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKYKDLKDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|242054033|ref|XP_002456162.1| hypothetical protein SORBIDRAFT_03g031470 [Sorghum bicolor]
 gi|241928137|gb|EES01282.1| hypothetical protein SORBIDRAFT_03g031470 [Sorghum bicolor]
          Length = 546

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      +GD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 162 ATLGRIINVIGEPIDE-----RGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 216

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 217 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 275

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 276 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 335

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 336 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 393

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 394 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 453

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 454 QNYKNLQDIIAILG 467


>gi|73968434|ref|XP_857891.1| PREDICTED: similar to ATP synthase beta chain, mitochondrial
           precursor isoform 3 [Canis familiaris]
          Length = 527

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +    L   I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 140 LGRIMNVIGEPIDERGPIKTKQL-WAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKG 198

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 199 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 257

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 258 KDATSKVTLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 317

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 318 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 375

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 376 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 435

Query: 389 IRLIGG 394
           I  I G
Sbjct: 436 IIAILG 441


>gi|19114063|ref|NP_593151.1| F1-ATPase beta subunit Atp2 [Schizosaccharomyces pombe 972h-]
 gi|114565|sp|P22068|ATPB_SCHPO RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|6433997|emb|CAB60704.1| F1-ATPase beta subunit Atp2 [Schizosaccharomyces pombe]
          Length = 525

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +     S  I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 138 LGRIMNVIGEPVDERGPIKAVKYS-PIHADAPSFEEQSTTPEILETGIKVVDLLAPYARG 196

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL--G 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +   
Sbjct: 197 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYREMQETGVIKL 255

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           +   K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 256 EGESKAALVFGQMNEPPGARARVALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVS 315

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 316 ALLGRIPSAVGYQPTLATDMGAMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 373

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+RS++E G YP VDPL S SR+ D     +E   L  S+  ++  ++  +DI
Sbjct: 374 HLDATTVLSRSISELGIYPAVDPLDSKSRMMDPRILGEEHYNLAGSVQQMLQEYKSLQDI 433

Query: 390 RLIGG 394
             I G
Sbjct: 434 IAILG 438


>gi|326443465|ref|ZP_08218199.1| F0F1 ATP synthase subunit beta [Streptomyces clavuligerus ATCC
           27064]
          Length = 473

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 176/327 (53%), Gaps = 15/327 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 94  GKVFNTLGEVLNHPEANKEKTERWAIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 153

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R ++  + V + + VGER RE  + I++      L+K+ 
Sbjct: 154 KIGLFGGAGVGKTVLIQEMIMRVANLHEGVSVFAGVGERTREGNDLIDEMEESGVLEKTA 213

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 214 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 273

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 274 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATTV 331

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + +AD  +    +  ++ ++++ +DI  I    
Sbjct: 332 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYEAAMRVKGILQKYKDLQDIIAI---- 387

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 388 LGIDELGEEDKLVVHRARRVERFLSQN 414


>gi|222632492|gb|EEE64624.1| hypothetical protein OsJ_19476 [Oryza sativa Japonica Group]
          Length = 514

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 163/313 (52%), Gaps = 25/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 122 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 176

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE 
Sbjct: 177 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 236

Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
               LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF
Sbjct: 237 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 296

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 297 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 354

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++ 
Sbjct: 355 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQ 414

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 415 NYKNLQDIIAILG 427


>gi|23503637|dbj|BAC20415.1| ATP synthase beta-subunit [Rusalka fusiformis]
          Length = 376

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G+ ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNLGPVKTGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 150 NLTESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 210 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK   ++ T    + R++E +
Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYATAQTVKKTLQRYKELQ 326

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 327 DIIAILG 333


>gi|294624654|ref|ZP_06703325.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601048|gb|EFF45114.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 468

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|254387510|ref|ZP_05002749.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064]
 gi|294815103|ref|ZP_06773746.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064]
 gi|197701236|gb|EDY47048.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064]
 gi|294327702|gb|EFG09345.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064]
          Length = 481

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 176/327 (53%), Gaps = 15/327 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 102 GKVFNTLGEVLNHPEANKEKTERWAIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+  M  R ++  + V + + VGER RE  + I++      L+K+ 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMIMRVANLHEGVSVFAGVGERTREGNDLIDEMEESGVLEKTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 282 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATTV 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + +AD  +    +  ++ ++++ +DI  I    
Sbjct: 340 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYEAAMRVKGILQKYKDLQDIIAI---- 395

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 396 LGIDELGEEDKLVVHRARRVERFLSQN 422


>gi|225159358|ref|ZP_03725655.1| ATP synthase F1, beta subunit [Opitutaceae bacterium TAV2]
 gi|224802064|gb|EEG20339.1| ATP synthase F1, beta subunit [Opitutaceae bacterium TAV2]
          Length = 476

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 158/307 (51%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G P+D    + K D    I    P    +    +  +TGI+V+D+  P   G
Sbjct: 88  LGRIFNVTGDPVDNKGPV-KFDKKYPIHRPAPSIAEQDTKAEILETGIKVLDLICPFTKG 146

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL------G 211
            + G+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 147 GKAGIFGGAGVGKTVVILELINNIAKAHGGYSVFAG-VGERSREGNDLYHEMSEAGVINQ 205

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           D+L KS V  V    +E P  R    L+A+ + EYF   K  +VLL +D+I RF+ +  E
Sbjct: 206 DDLSKSKVALVYGQMNEPPGARMRVALSALAMTEYFRDEKNQDVLLFIDNIFRFSQAGSE 265

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G  P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 266 VSALLGRSPSAVGYQPTLANEMGILQERI--TSTKKGSITSVQAVYVPADDLTDPAPANT 323

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD  IVL RS+AE G YP VDPLAS S+  D A   +E   V+  +  ++ R+++ +
Sbjct: 324 FAHLDSTIVLERSIAELGIYPAVDPLASTSKALDPAIVGEEHYTVAREVQRVLQRYKDLQ 383

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 384 DIIAILG 390


>gi|109900593|ref|YP_663848.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas atlantica T6c]
 gi|123063994|sp|Q15MU4|ATPB2_PSEA6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|109702874|gb|ABG42794.1| ATP synthase F1, beta subunit [Pseudoalteromonas atlantica T6c]
          Length = 461

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ +  M I  + P   ++    +  +TGI+VID+  P  
Sbjct: 84  ATLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPTYEDQSSSIELLETGIKVIDLVCPFA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLD 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G 
Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLAEEMGVLQERIAST--KTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       +  ++ R++E +DI  I G
Sbjct: 321 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARGVQSVLQRYKELKDIIAILG 380


>gi|86130858|ref|ZP_01049457.1| ATP synthase F1, beta subunit [Dokdonia donghaensis MED134]
 gi|85818269|gb|EAQ39429.1| ATP synthase F1, beta subunit [Dokdonia donghaensis MED134]
          Length = 502

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 162/330 (49%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG D L K GD  + I    P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGMDDLPKTGDAGLPIHRSAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEEGGWDLSKVDKTAMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +E  +   ++  L+ R++E +DI  I G
Sbjct: 388 LGNEHYECAQNVKELLQRYKELQDIIAILG 417


>gi|238023073|ref|ZP_04603499.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147]
 gi|237865456|gb|EEP66596.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147]
          Length = 465

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 20/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTP 157
              GR+++ LGKP+D     G  D S    + ++ P  +      +  +TGI+VID+  P
Sbjct: 81  ATLGRIVDVLGKPVD---EAGAIDASHTRAIHQIAPKFDELSSATELLETGIKVIDLLCP 137

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N
Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKESN 196

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSI 266
            L K  +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  + 
Sbjct: 197 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDETGKGRDVLFFVDNIYRYTLAG 256

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 257 TEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPA 314

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E
Sbjct: 315 TTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQATLQKYKE 374

Query: 386 TRDIRLIGG 394
            RDI  I G
Sbjct: 375 LRDIIAILG 383


>gi|49476187|ref|YP_034228.1| F0F1 ATP synthase subunit beta [Bartonella henselae str. Houston-1]
 gi|81827679|sp|Q6G1W9|ATPB_BARHE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49238995|emb|CAF28295.1| ATP synthase beta chain [Bartonella henselae str. Houston-1]
          Length = 531

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 23/330 (6%)

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  VF  G +  +       GR++N +G+P+D    +     +  I  + P  + +    
Sbjct: 119 GQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSK-TRSIHQEAPEYVEQSTAS 177

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198
           +   TGI+V+D+  P   G ++G+F G+G+GK+ L+    +  A++     V    VGER
Sbjct: 178 EILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGER 236

Query: 199 GRE----VREFIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE      E IE  +  N K         K  +V    +E P  R    L+ +TIAE F
Sbjct: 237 TREGNDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESF 296

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +    G
Sbjct: 297 RDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTRTG 354

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D   
Sbjct: 355 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLI 414

Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             +E   V+  +  ++ R+   +DI  I G
Sbjct: 415 VGEEHYTVACQVQTILQRYRSLQDIIAILG 444


>gi|306991567|pdb|2XND|D Chain D, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991568|pdb|2XND|E Chain E, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991569|pdb|2XND|F Chain F, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
          Length = 467

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 74  IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 132

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 133 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 191

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 192 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 251

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 252 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 309

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 310 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 369

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 370 LQDYKSLQDIIAILG 384


>gi|183206540|gb|ACC54468.1| ATP synthase beta subunit [Azorina vidalii]
          Length = 476

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 38  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGTPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 98  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 154

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 155 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMXDSGVINEQ 213

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 214 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 273

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 274 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 331

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R++E +D
Sbjct: 332 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPXIVSDEHYKTAQSVKQTLQRYKELQD 391

Query: 389 IRLIGG 394
           I  I G
Sbjct: 392 IITILG 397


>gi|115439241|ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group]
 gi|113533431|dbj|BAF05814.1| Os01g0685800 [Oryza sativa Japonica Group]
          Length = 557

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 165 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 219

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 220 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 278

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 279 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 338

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 339 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 396

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 397 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 456

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 457 QNYKNLQDIIAILG 470


>gi|38906095|gb|AAR27800.1| ATP synthase beta chain [Bifidobacterium bifidum DSM 20456]
          Length = 373

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLSSSSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|34499998|gb|AAQ73581.1| ATP synthase beta subunit [Mannheimia sp. P373]
          Length = 444

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160
            GR++N LG+PID    +G+ +     + +  P+   Q     F +TGI+VID+  P   
Sbjct: 82  LGRIMNVLGEPIDEAGPIGEEE--RWTIHRAAPSYEEQANSTEFLETGIKVIDLVPPFAK 139

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K
Sbjct: 140 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDK 199

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +
Sbjct: 200 VSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 259

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  +   E+  L ERI  +  + G+IT+V +V V  D+  +P   +  + LD  +
Sbjct: 260 PSAVGYQPTFAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTEPSPATTFAHLDSTV 317

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R++A  G YP VDPL S SR  D     +E   V+  +   + R++E +DI  I G
Sbjct: 318 VLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376


>gi|288941075|ref|YP_003443315.1| H(+)-transporting two-sector ATPase [Allochromatium vinosum DSM
           180]
 gi|288896447|gb|ADC62283.1| H(+)-transporting two-sector ATPase [Allochromatium vinosum DSM
           180]
          Length = 459

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 24/354 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCGRVINALGKPID 114
           GQVIR   D V I      E++   DL   W RF   P     S    GR  + LG P D
Sbjct: 43  GQVIRAADDEVLILVFEGTEDL---DLENTWVRFLDEPIEIALSPEILGREFDGLGVPRD 99

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +          S + PA  R    +  +TGI  ID    L  GQ++ +F+GSG+  
Sbjct: 100 GRPPVLSSLRRAVGGSAINPAA-RTYPREFIQTGISTIDGLNSLVRGQKLPIFSGSGLPH 158

Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV-VATSDE 226
           + L +   R       S  F  ++ + +G    + + F +++    + ++VV+ V  +D+
Sbjct: 159 NRLAAQIVRQAKLVDESSSF-SIVFAAMGVSYADAKFFRDEFANSGVLRNVVMFVNLADD 217

Query: 227 SPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
            P+ R   P TA+T AEY +   D +VL++L  +T +A ++RE+AT  G++P  +GYP  
Sbjct: 218 PPVERLTLPRTALTAAEYLAYDLDRHVLVVLTDMTNYAEALREVATAKGDVPARKGYPGY 277

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           ++S+L  L ER G   +  G+IT +  V +  D+   PI D    I +G IVL+R L  +
Sbjct: 278 LYSDLAELYERCGRIHERHGSITMMPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHNQ 337

Query: 346 GRYPPVDPLASVSRLADKAWSADEK-----KLVSSLTHLIHRFEETRDIRLIGG 394
           G YPPV+   S+SRL       D+      ++ + L  L  R +ETR++  I G
Sbjct: 338 GIYPPVNISPSLSRLMKDGIGKDDTREDHPRVAAQLYALYARAQETRNLASIIG 391


>gi|308800050|ref|XP_003074806.1| AtpB ATP synthase beta chain, mitochondrial precursor (IC)
           [Ostreococcus tauri]
 gi|119358798|emb|CAL52064.2| AtpB ATP synthase beta chain, mitochondrial precursor (IC)
           [Ostreococcus tauri]
          Length = 530

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 158/310 (50%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +     S+ I  + PP +++    +   TGI+V+D+  P  
Sbjct: 139 ATLGRIMNVIGEPIDECGPIST-TTSLAIHREAPPFVDQSTEMQMLVTGIKVVDLLAPYQ 197

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+     L++  A+      V    VGER RE      E IE    
Sbjct: 198 KGGKIGLFGGAGVGKTVFIMELINNIAKGHGGFSVFAG-VGERTREGNDLYHEMIEGGVI 256

Query: 209 YLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
            LGD     K  +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +
Sbjct: 257 KLGDQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLFFVDNIFRFTQA 316

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V ++ V  D+  DP  
Sbjct: 317 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAIYVPADDLTDPAP 374

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+RS+AE G YP VDPL S SR+       DE       +  ++  ++
Sbjct: 375 ATTFAHLDATTVLSRSIAEIGIYPAVDPLDSTSRMLSPLALGDEHYNTARGVQKILQDYK 434

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 435 NLQDIIAILG 444


>gi|227485042|ref|ZP_03915358.1| V family two sector ATPase, V(1) subunit B [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227236875|gb|EEI86890.1| V family two sector ATPase, V(1) subunit B [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 457

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 178/351 (50%), Gaps = 17/351 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115
           +G V+ ++ D V +      +  S+ D+V  F+     +  +    GR  N +G+PID G
Sbjct: 40  VGSVVMVDDDTVTVEVYANTDNFSVEDIVVSFYERPLELPLNETILGRTFNGIGEPIDNG 99

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            D        +E ++  P A  R+      +TGI  ID  T L  GQ++ +F+GSG+  +
Sbjct: 100 GDIYADETYPVEGLALNPVA--REYPRDFIQTGISAIDTLTTLIRGQKLPIFSGSGLPHN 157

Query: 176 TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL 230
            + +   R            + + +G +  E   F + +    +K  +V+     +SPI+
Sbjct: 158 EIAAQIIRQAKLKTNEDFAFVFAAMGIKKDEAMFFEDAFSKAGVKDKLVMYQNLADSPIM 217

Query: 231 -RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R +AP  A+T AEY +  KG +VL+I+  +T +  ++RE+++  GE+P  +GYP  ++S
Sbjct: 218 ERLLAPKCALTAAEYLAYKKGYHVLVIITDMTSYCEALREVSSIRGEIPSRKGYPGYLYS 277

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            L  L ER G  E  KG++T +  + +  D+   P+AD    I +G IV++R L+ +G Y
Sbjct: 278 NLASLYERAGMIEGVKGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRGLSSKGVY 337

Query: 349 PPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           PP++ L S+SRL      +    AD + +++ L     +  + R+I  I G
Sbjct: 338 PPINVLPSLSRLMKDGIGEGYTRADHEDVMNQLYESYSKVIDVRNIAQIVG 388


>gi|120405282|ref|YP_955111.1| F0F1 ATP synthase subunit beta [Mycobacterium vanbaalenii PYR-1]
 gi|190358686|sp|A1TD55|ATPB_MYCVP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119958100|gb|ABM15105.1| ATP synthase F1, beta subunit [Mycobacterium vanbaalenii PYR-1]
          Length = 475

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 162/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +   GK      I  K P   + +   +  +TG++V+D+ TP   G 
Sbjct: 96  GHVFNALGDCLD-EPGYGKDFEHWSIHRKPPAFADLEPRTEMLETGLKVVDLLTPYVRGG 154

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 155 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDTA 214

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F   +G +VLL +D+I RF  +  E++T  G +P
Sbjct: 215 LVFGQMDEPPGTRMRVALSALTMAEFFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 274

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +  +IT++ +V V  D++ DP   +  + LD    
Sbjct: 275 SAVGYQPTLADEMGELQERITSTRGK--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 332

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++  +G +P VDPLAS S + D A   DE  ++   +  ++ R+++ +DI  I G
Sbjct: 333 LSRAVFSKGIFPAVDPLASSSTILDPAVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 390


>gi|66773080|ref|NP_001019600.1| mitochondrial ATP synthase beta subunit-like [Danio rerio]
 gi|66267496|gb|AAH95620.1| Zgc:111961 [Danio rerio]
          Length = 517

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P   +    ++   TGI+V+
Sbjct: 121 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 179

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 239 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYDVARGVQKI 416

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 417 LQDYKSLQDIIAILG 431


>gi|323140893|ref|ZP_08075806.1| ATP synthase F1, beta subunit [Phascolarctobacterium sp. YIT 12067]
 gi|322414631|gb|EFY05437.1| ATP synthase F1, beta subunit [Phascolarctobacterium sp. YIT 12067]
          Length = 448

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D DD+  +      I    P    +    K  +TGI+V+D+  P   G
Sbjct: 69  LGRIFNVLGETVDHDDTPVEAADHWPIHRPAPSFDQQATATKILETGIKVVDLIAPYAMG 128

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ ++     +         + + VGER RE  +   +      + K+
Sbjct: 129 GKIGLFGGAGVGKTVIIMELIHNIATAHGGYSVFAGVGERTREGNDLWGEMKESGVINKT 188

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF    G +VLL +D+I RF  +  E++   G +
Sbjct: 189 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVGGQDVLLFIDNIFRFIQAGSEVSALLGRM 248

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP      + LD   
Sbjct: 249 PSAVGYQPTLANDIGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPAGTFAHLDATT 306

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D     +E   V+  +  ++ R++E +DI  I G
Sbjct: 307 VLSRQIAELGIYPAVDPLDSTSRILDPLVIGEEHYHVARGVQAILQRYKELQDIIAILG 365


>gi|126725129|ref|ZP_01740972.1| F0F1 ATP synthase subunit beta [Rhodobacterales bacterium HTCC2150]
 gi|126706293|gb|EBA05383.1| F0F1 ATP synthase subunit beta [Rhodobacterales bacterium HTCC2150]
          Length = 474

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 165/325 (50%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+    G+  +       GR++N  G P+D    + K   S  I    P    +    + 
Sbjct: 69  DVTDTGGQIMVPVGTATLGRIMNVTGDPVDEKGPV-KTKESRAIHGDAPAFAEQSTETEI 127

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERG 199
             TGI+VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER 
Sbjct: 128 LVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGLSVFAGVGERT 185

Query: 200 RE----VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGD 250
           RE      E IE    + D+L+KS   +V    +E P  R    L+ +T+AE F    G 
Sbjct: 186 REGNDLYHEMIESGVIVPDDLEKSKIALVYGQMNEPPGARMRIALSGLTLAEQFRDDSGS 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--ASTKSGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D     +E 
Sbjct: 304 QAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIIGEEH 363

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            K+ + +  ++ R++  +DI  I G
Sbjct: 364 YKVATDVQQVLQRYKSLQDIIAILG 388


>gi|120609075|ref|YP_968753.1| F0F1 ATP synthase subunit beta [Acidovorax citrulli AAC00-1]
 gi|326315260|ref|YP_004232932.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|190358284|sp|A1TJ41|ATPB_ACIAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120587539|gb|ABM30979.1| ATP synthase F1 subcomplex beta subunit [Acidovorax citrulli
           AAC00-1]
 gi|323372096|gb|ADX44365.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 476

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 17/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    + + +L+  I  K P        ++  +TGI+VID+  P  
Sbjct: 91  ATLGRIMDVLGSPIDERGPVSQ-ELTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFA 149

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD--- 212
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +       
Sbjct: 150 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 208

Query: 213 NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
           NL+K       +V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  
Sbjct: 209 NLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 268

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 269 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 326

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D     +E  ++   +   + R++E 
Sbjct: 327 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYQVARGVQGTLQRYKEL 386

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 387 RDIIAILG 394


>gi|209878622|ref|XP_002140752.1| ATP synthase F1, beta subunit [Cryptosporidium muris RN66]
 gi|209556358|gb|EEA06403.1| ATP synthase F1, beta subunit, putative [Cryptosporidium muris
           RN66]
          Length = 558

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 165/326 (50%), Gaps = 36/326 (11%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + +  + + I  K P    +        TGI+V+D+  P  
Sbjct: 151 ATLGRIMNVIGEPVDECGPI-ESTIRLPIHRKAPEYTEQGTDPSILITGIKVVDLLAPYA 209

Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE------------- 201
            G +IG+F G+G+GK+ L+     ++  R   +   + + VGER RE             
Sbjct: 210 KGGKIGLFGGAGVGKTVLIMELINNVAKRHGGYS--VFAGVGERTREGNDLYHEMLITGV 267

Query: 202 -VREFIE---DYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKG 249
             ++FI    DY G+          K+ +V    +E P  R    LT +T+AEYF   KG
Sbjct: 268 NKKKFISMELDYKGNKYTKCDFTGSKTALVYGQMNEPPGARARVALTGLTVAEYFRDEKG 327

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+
Sbjct: 328 QDVLLFIDNIYRFTQAGSEVSALLGRMPSAVGYQPTLATDLGSLQERI--TTTKKGSITS 385

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V +V V  D+  DP + +  + LD   VL+R +AE G YP VDPL S SR+ D +    E
Sbjct: 386 VQAVYVPADDLTDPASAATFAHLDATTVLSRKIAEFGIYPAVDPLDSTSRMLDPSIIDYE 445

Query: 370 KKLVS-SLTHLIHRFEETRDIRLIGG 394
              V+  +  L+  ++  +DI  I G
Sbjct: 446 HYHVAREVQKLLQDYKSLQDIIAILG 471


>gi|83854832|ref|ZP_00948362.1| ATP synthase subunit B [Sulfitobacter sp. NAS-14.1]
 gi|83842675|gb|EAP81842.1| ATP synthase subunit B [Sulfitobacter sp. NAS-14.1]
          Length = 474

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+ ID      KGD+       I +  P    +    +  +TGI+VID+ 
Sbjct: 84  ATLGRIMNVVGEAIDE-----KGDIQSAERRSIHADAPEFAEQSTTSEVLETGIKVIDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFI 206
            P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E I
Sbjct: 139 APYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMI 196

Query: 207 EDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
           E  +   D+L+KS V  V    +E P  R    LT +T+AE F  + G +VL  +D+I R
Sbjct: 197 ESNVINPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V  D+  
Sbjct: 257 FTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKSGSITSVQAVYVPADDLT 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+RS++E+G YP VDPL S SRL D +   +E   V+  +  ++
Sbjct: 315 DPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPSIVGEEHYNVARDVQGIL 374

Query: 381 HRFEETRDIRLIGG 394
            R++  +DI  I G
Sbjct: 375 QRYKSLQDIIAILG 388


>gi|304388486|ref|ZP_07370589.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC
           13091]
 gi|304337483|gb|EFM03649.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC
           13091]
          Length = 465

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|91178130|gb|ABE27300.1| mitochondrial F-ATPase beta subunit [Wickerhamomyces anomalus]
          Length = 337

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 167/311 (53%), Gaps = 28/311 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G ++ +  + +   PP+ + Q    +  +TGI+V+D+  P
Sbjct: 19  LGRIINVVGEPIDE-----RGPINTKQRNPIHAEPPSFSEQSTAAEVLETGIKVVDLLAP 73

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207
              G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  
Sbjct: 74  YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETG 132

Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
             +  GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 133 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQ 190

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP 
Sbjct: 191 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTQKGSVTSVQAVYVPADDLTDPA 248

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R ++E G YP VDPL S SRL D +    E   + +++   +  +
Sbjct: 249 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATNVQQTLQAY 308

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 309 KSLQDIIAILG 319


>gi|83941355|ref|ZP_00953817.1| ATP synthase subunit B [Sulfitobacter sp. EE-36]
 gi|83847175|gb|EAP85050.1| ATP synthase subunit B [Sulfitobacter sp. EE-36]
          Length = 474

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+ ID      KGD+       I +  P    +    +  +TGI+VID+ 
Sbjct: 84  ATLGRIMNVVGEAIDE-----KGDIQSAERRSIHADAPEFAEQSTTSEVLETGIKVIDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFI 206
            P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E I
Sbjct: 139 APYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMI 196

Query: 207 EDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
           E  +   D+L+KS V  V    +E P  R    LT +T+AE F  + G +VL  +D+I R
Sbjct: 197 ESNVINPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V  D+  
Sbjct: 257 FTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKSGSITSVQAVYVPADDLT 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+RS++E+G YP VDPL S SRL D +   +E   V+  +  ++
Sbjct: 315 DPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPSIVGEEHYNVARDVQGIL 374

Query: 381 HRFEETRDIRLIGG 394
            R++  +DI  I G
Sbjct: 375 QRYKSLQDIIAILG 388


>gi|121592742|ref|YP_984638.1| F0F1 ATP synthase subunit beta [Acidovorax sp. JS42]
 gi|190358248|sp|A1W2T7|ATPB_ACISJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120604822|gb|ABM40562.1| ATP synthase F1 subcomplex beta subunit [Acidovorax sp. JS42]
          Length = 468

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G +V + G     P      GR+++ LG PID    + +  L+  
Sbjct: 51  VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQ-SLTAS 109

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +         +NL +S V  V    +E P  R    
Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVA 228

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLD 346

Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           S SR  D     +E  ++   +   + R++E RDI  I G
Sbjct: 347 STSRQLDPQVVGEEHYQVARQVQGTLQRYKELRDIIAILG 386


>gi|38906109|gb|AAR27807.1| ATP synthase beta chain [Bifidobacterium animalis subsp. animalis
           ATCC 25527]
          Length = 373

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLSSSSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|325135527|gb|EGC58145.1| ATP synthase F1, beta subunit [Neisseria meningitidis M0579]
          Length = 465

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G 
Sbjct: 84  GRIVDVLGTPVDEAGPIDT-DKSCAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIAT 271
            +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++ 
Sbjct: 202 AMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSA 261

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 262 LLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAH 319

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI 
Sbjct: 320 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDII 379

Query: 391 LIGG 394
            I G
Sbjct: 380 AILG 383


>gi|222109523|ref|YP_002551787.1| f0f1 ATP synthase subunit beta [Acidovorax ebreus TPSY]
 gi|254808148|sp|B9MBA3|ATPB_ACIET RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|221728967|gb|ACM31787.1| ATP synthase F1, beta subunit [Acidovorax ebreus TPSY]
          Length = 468

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G +V + G     P      GR+++ LG PID    + +  L+  
Sbjct: 51  VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQ-SLTAS 109

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +         +NL +S V  V    +E P  R    
Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVA 228

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLD 346

Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           S SR  D     +E  ++   +   + R++E RDI  I G
Sbjct: 347 STSRQLDPQVVGEEHYQVARQVQGTLQRYKELRDIIAILG 386


>gi|3660251|pdb|1NBM|D Chain D, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|3660253|pdb|1NBM|F Chain F, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
          Length = 480

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 86  IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 203

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 321

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 382 LQDYKSLQDIIAILG 396


>gi|241758951|ref|ZP_04757063.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114]
 gi|241320772|gb|EER57005.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114]
          Length = 465

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|227495029|ref|ZP_03925345.1| H(+)-transporting two-sector ATPase [Actinomyces coleocanis DSM
           15436]
 gi|226831481|gb|EEH63864.1| H(+)-transporting two-sector ATPase [Actinomyces coleocanis DSM
           15436]
          Length = 480

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PP  ++ +   K F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 126 IHRQPPHFDQLESKTKMFETGIKVIDLLTPYVLGGKIGLFGGAGVGKTVLIQEMIQRVAQ 185

Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D   +S+   VGER RE  + I E        K+ +V    DE P  R    LT +T+AE
Sbjct: 186 DHGGVSVFAGVGERTREGNDLIVEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 245

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+ +L ERI  +  
Sbjct: 246 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSA 303

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SR+ D
Sbjct: 304 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLASTSRILD 363

Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
             +  +E   V++ +  ++ + +E +DI  I G
Sbjct: 364 PTYVGEEHYAVATRVKSILQKNKELQDIIAILG 396


>gi|261379445|ref|ZP_05984018.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703]
 gi|319638951|ref|ZP_07993709.1| ATP synthase subunit beta [Neisseria mucosa C102]
 gi|284797899|gb|EFC53246.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703]
 gi|317399855|gb|EFV80518.1| ATP synthase subunit beta [Neisseria mucosa C102]
          Length = 465

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|225075914|ref|ZP_03719113.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens
           NRL30031/H210]
 gi|224952770|gb|EEG33979.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens
           NRL30031/H210]
          Length = 465

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|46909231|gb|AAT06133.1| ATP synthase beta subunit [Antedon mediterranea]
          Length = 427

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 151/284 (53%), Gaps = 24/284 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  E    I ++ P  +     ++  +TGI+V+D+  P
Sbjct: 64  LGRIINVIGEPIDE-----RGPIPTERRAAIHAEAPEFIEMNVEQEILETGIKVVDLLAP 118

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  
Sbjct: 119 YAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIEGG 177

Query: 210 LGD---NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           + D   N  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 178 VIDLKGNKSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 237

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP  
Sbjct: 238 GSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAP 295

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
            +  + LD   VL+R +AE G YP VDPL S SR+ D     DE
Sbjct: 296 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRIMDPFIVGDE 339


>gi|288554385|ref|YP_003426320.1| F0F1 ATP synthase subunit beta [Bacillus pseudofirmus OF4]
 gi|14916961|sp|P22478|ATPB_BACPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12061046|gb|AAG48363.1|AF330160_10 ATP synthase beta subunit [Bacillus pseudofirmus OF4]
 gi|288545545|gb|ADC49428.1| ATP synthase beta subunit [Bacillus pseudofirmus OF4]
          Length = 470

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 169/330 (51%), Gaps = 15/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID  + +        I  + P         +  +TGI+V+D+  P  
Sbjct: 90  ATLGRVFNVLGEAIDLGEPVAADVKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +      +K
Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    L+ +T+AE+F  + G +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALSGLTMAEHFRDRDGQDVLLFVDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  + G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + +++E +DI  I 
Sbjct: 328 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 386

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + ++    VH+   I  FL Q+
Sbjct: 387 ---LGMDELSEEDKLVVHRARRIQFFLSQN 413


>gi|120600835|ref|YP_965409.1| F0F1 ATP synthase subunit beta [Shewanella sp. W3-18-1]
 gi|146295036|ref|YP_001185460.1| F0F1 ATP synthase subunit beta [Shewanella putrefaciens CN-32]
 gi|166222415|sp|A4YCH8|ATPB_SHEPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222417|sp|A1RQB0|ATPB_SHESW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120560928|gb|ABM26855.1| ATP synthase F1, beta subunit [Shewanella sp. W3-18-1]
 gi|145566726|gb|ABP77661.1| ATP synthase F1, beta subunit [Shewanella putrefaciens CN-32]
 gi|319428554|gb|ADV56628.1| ATP synthase F1, beta subunit [Shewanella putrefaciens 200]
          Length = 463

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +  + I    P   ++    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGEPIDEAGPIGEEERYV-IHRAAPSYEDQSNTTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    L+ +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|330721486|gb|EGG99532.1| ATP synthase beta chain [gamma proteobacterium IMCC2047]
          Length = 464

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 159/304 (52%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG PID    +G+ +  M I  K P        E+  +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGNPIDECGEIGEQE-RMPIHRKAPTYEELAASEELLETGIKVIDLVCPFAKGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213
           ++G+F G+G+GK+  +     +   +   +S+   VGER RE  +F  +         +N
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEN 202

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
            K+S V  V    +E P  R    LT +T+AE F   G +VLL +D+I R+  +  E++ 
Sbjct: 203 FKESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDDGKDVLLFVDNIYRYTLAGTEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A +G YP VDPL S SR  D      E  ++   +  ++ R++E +DI 
Sbjct: 321 LDSTVVLSRDIASKGIYPAVDPLDSTSRQLDPLIIGTEHYEVARGVQGVLQRYKELKDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|159155102|gb|AAI54660.1| Zgc:111961 [Danio rerio]
          Length = 517

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P   +    ++   TGI+V+
Sbjct: 121 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 179

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 239 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYDVARGVQKI 416

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 417 LQDYKSLQDIIAILG 431


>gi|226487052|emb|CAX75391.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Schistosoma japonicum]
          Length = 517

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 26/289 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PID      +G +  ++MS +    P  ++    ++  +TGI+V+D+  P 
Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206
             G +IG+F G+G+GK+ L+    +  AR+     V    VGER RE  +         +
Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            D  G+N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 304 GSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +  + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+
Sbjct: 362 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSVA 410


>gi|119509845|ref|ZP_01628988.1| ATP synthase subunit B [Nodularia spumigena CCY9414]
 gi|119465454|gb|EAW46348.1| ATP synthase subunit B [Nodularia spumigena CCY9414]
          Length = 482

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I    P   + +     F+TGI+V+D+ TP  
Sbjct: 95  VTLGRIFNVLGEPVDNQGPV-NAEQTLPIHRPSPKFTDLETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------ 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE  +   + +      
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMMESGVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSI 266
            DNL +S   +V    +E P  R    L+ +T+AEYF   SK D VLL +D+I RF  + 
Sbjct: 214 KDNLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVSKQD-VLLFVDNIFRFVQAG 272

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 273 SEVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPA 330

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LDG  VL+R LA +G YP VDPL S S +       D+      ++   + R++E
Sbjct: 331 TTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPEIVGDDHYSTARAVQSTLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|34500010|gb|AAQ73587.1| ATP synthase beta subunit [Haemophilus parasuis]
          Length = 444

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P   ++    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEDQANSTELLETGIKVIDLIAPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V S L   D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVPSGLRSADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI  I G
Sbjct: 319 LSRNIASLGIYPAIDPLNSTSRQLDPLVVVQEHYDVARGVQKTLQRYKELKDIIAILG 376


>gi|56707243|ref|YP_169139.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669713|ref|YP_666270.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301278|ref|YP_001121246.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|254369928|ref|ZP_04985936.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254375017|ref|ZP_04990497.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|81820830|sp|Q5NIK3|ATPB_FRATT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123169682|sp|Q14K06|ATPB_FRAT1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201706|sp|A4IW24|ATPB_FRATW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56603735|emb|CAG44697.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320046|emb|CAL08080.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049055|gb|ABO46126.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568174|gb|EDN33828.1| hypothetical protein FTBG_01520 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151572735|gb|EDN38389.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|282158352|gb|ADA77743.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis NE061598]
 gi|332184761|gb|AEE27015.1| ATP synthase beta chain [Francisella cf. novicida 3523]
          Length = 458

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N LG+PID    +   +     + + PPA +   +     +TGI+V+D+  P   
Sbjct: 83  LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L 
Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    L+ +TIAE F  +  +VL+ +D+I R+  +  E++   G 
Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  
Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           IVL+R +AE G YP VDPL S SR  D      D  +   ++  ++ R++E +DI  I G
Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 377


>gi|225849748|ref|YP_002729982.1| F0F1 ATP synthase subunit beta [Persephonella marina EX-H1]
 gi|225646062|gb|ACO04248.1| ATP synthase F1, beta subunit [Persephonella marina EX-H1]
          Length = 477

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 162/311 (52%), Gaps = 11/311 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  +I       GR+ N +G+PID D    + +    I    P    +    + F+TGI+
Sbjct: 85  GPLQIPVGKPVLGRIFNVVGQPID-DGGPVEAEEKWPIFRPAPSFEEQSTKVEIFETGIK 143

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-F 205
           VID+  P   G ++G+F G+G+GK+ L+       A+      V++  VGER RE  + +
Sbjct: 144 VIDLLVPFIKGGKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLW 202

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +E      L  + +V    +E P +R     T +T+AEYF   +  +VL+ +D+I RF  
Sbjct: 203 MEMKESGVLPYTAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++T  G LP A GY  ++ +++  + ERI  +    G+IT++ +V V  D+  DP 
Sbjct: 263 AGAEVSTLLGRLPSAVGYQPTLGTDVGEVQERI--TSTVNGSITSIQAVYVPADDITDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             SV + LD  IVL R LAE G YP +DPL S S+     +  +E   V+  +  ++ R+
Sbjct: 321 PASVFAHLDATIVLQRRLAELGIYPAIDPLESTSKALAPEYVGEEHYFVAREVQRILQRY 380

Query: 384 EETRDIRLIGG 394
           +E ++I  I G
Sbjct: 381 KELQEIIAILG 391


>gi|46909265|gb|AAT06150.1| ATP synthase beta subunit [Strongylocentrotus purpuratus]
          Length = 427

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 148/272 (54%), Gaps = 16/272 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +G  D    I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 65  GRIINVIGEPIDERGPIGT-DKRSAIHAEAPAFVEMSVNQEILVTGIKVVDLLAPYAKGG 123

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L 
Sbjct: 124 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTRESNDLYHEMIEGGVISLK 182

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 183 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFCDQEGQDVLLFIDNIFRFTQAGSEVS 242

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 243 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            LD   VL+R +AE G +P VDPL S SR+ D
Sbjct: 301 HLDATTVLSRGIAELGIHPAVDPLDSSSRIMD 332


>gi|239982327|ref|ZP_04704851.1| F0F1 ATP synthase subunit beta [Streptomyces albus J1074]
 gi|291454172|ref|ZP_06593562.1| ATP synthase subunit B [Streptomyces albus J1074]
 gi|291357121|gb|EFE84023.1| ATP synthase subunit B [Streptomyces albus J1074]
          Length = 480

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  +          I  K P     +   + F+TGI+VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNKPEENANIGERWAIHRKAPGFDQLESKTEMFETGIKVIDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+      + K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMAESGVIDKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++E+G YP VDPL S SR+ D  + A D  +    +  ++ ++++ +DI  I G
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAKDHYEAAMRVKGILQKYKDLQDIIAILG 396


>gi|121635590|ref|YP_975835.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis FAM18]
 gi|161869279|ref|YP_001598446.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis 053442]
 gi|166201721|sp|A1KW11|ATPB_NEIMF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081336|sp|A9M123|ATPB_NEIM0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120867296|emb|CAM11067.1| ATP synthase beta chain [Neisseria meningitidis FAM18]
 gi|161594832|gb|ABX72492.1| ATP synthase beta chain [Neisseria meningitidis 053442]
 gi|254670875|emb|CBA07378.1| ATP synthase beta chain [Neisseria meningitidis alpha153]
 gi|254672595|emb|CBA06293.1| ATP synthase beta chain [Neisseria meningitidis alpha275]
 gi|261393264|emb|CAX50890.1| ATP synthase beta chain [Neisseria meningitidis 8013]
 gi|319409757|emb|CBY90063.1| ATP synthase beta chain [Neisseria meningitidis WUE 2594]
 gi|325127449|gb|EGC50379.1| ATP synthase F1, beta subunit [Neisseria meningitidis N1568]
 gi|325131657|gb|EGC54363.1| ATP synthase F1, beta subunit [Neisseria meningitidis M6190]
 gi|325133395|gb|EGC56059.1| ATP synthase F1, beta subunit [Neisseria meningitidis M13399]
 gi|325137520|gb|EGC60103.1| ATP synthase F1, beta subunit [Neisseria meningitidis ES14902]
 gi|325141528|gb|EGC63998.1| ATP synthase F1, beta subunit [Neisseria meningitidis 961-5945]
 gi|325143645|gb|EGC65964.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240013]
 gi|325199025|gb|ADY94481.1| ATP synthase F1, beta subunit [Neisseria meningitidis G2136]
 gi|325204886|gb|ADZ00340.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240355]
 gi|325206841|gb|ADZ02294.1| ATP synthase F1, beta subunit [Neisseria meningitidis M04-240196]
          Length = 465

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|91178134|gb|ABE27302.1| mitochondrial F-ATPase beta subunit [Kluyveromyces lactis]
          Length = 337

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +    +   I +  P  + +    +  +TGI+V+D+  P   G
Sbjct: 19  LGRIINVIGEPIDERGPI-NSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARG 77

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 78  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 136

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 194

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  +
Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATQVQQTLQAYKSLQ 312

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 313 DIIAILG 319


>gi|46909239|gb|AAT06137.1| ATP synthase beta subunit [Dendraster excentricus]
          Length = 427

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +   D    I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 64  LGRIMNVIGEPIDERGPI-PTDKRAAIHAEAPEFVEMSVAQEILVTGIKVVDLLAPYAKG 122

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 181

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 182 KDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D     +   K+  S+  ++   +  +D
Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNIVGERHYKVARSVQKILQDNKTLQD 359

Query: 389 IRLIGG 394
           I  I G
Sbjct: 360 IIAILG 365


>gi|38710239|gb|AAR27324.1| AtpD [Bifidobacterium animalis]
          Length = 377

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   
Sbjct: 60  PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119

Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           +S+   VGER RE  + I E      L+K+ +V    DE P  R   PLTA+T+AEYF  
Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +
Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPL+S SR+ D  + 
Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLSSSSRILDPRYV 297

Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
                   + +  ++ R +E +D I LIG
Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326


>gi|1827812|pdb|1COW|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827813|pdb|1COW|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827814|pdb|1COW|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1942371|pdb|1EFR|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942372|pdb|1EFR|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942373|pdb|1EFR|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1943083|pdb|1BMF|D Chain D, Bovine Mitochondrial F1-Atpase
 gi|1943084|pdb|1BMF|E Chain E, Bovine Mitochondrial F1-Atpase
 gi|1943085|pdb|1BMF|F Chain F, Bovine Mitochondrial F1-Atpase
 gi|6573683|pdb|1QO1|D Chain D, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573684|pdb|1QO1|E Chain E, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573685|pdb|1QO1|F Chain F, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|9256941|pdb|1E1Q|D Chain D, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256942|pdb|1E1Q|E Chain E, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256943|pdb|1E1Q|F Chain F, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256948|pdb|1E1R|D Chain D, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256949|pdb|1E1R|E Chain E, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256950|pdb|1E1R|F Chain F, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|11514060|pdb|1E79|E Chain E, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|11514061|pdb|1E79|F Chain F, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|14278507|pdb|1H8H|D Chain D, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278508|pdb|1H8H|E Chain E, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278509|pdb|1H8H|F Chain F, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|15825705|pdb|1H8E|D Chain D, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825706|pdb|1H8E|E Chain E, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825707|pdb|1H8E|F Chain F, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|33357744|pdb|1OHH|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|33357745|pdb|1OHH|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|33357746|pdb|1OHH|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|51247972|pdb|1W0J|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247973|pdb|1W0J|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247974|pdb|1W0J|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247979|pdb|1W0K|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247980|pdb|1W0K|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247981|pdb|1W0K|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|109157333|pdb|2CK3|D Chain D, Azide Inhibited Bovine F1-Atpase
 gi|109157334|pdb|2CK3|E Chain E, Azide Inhibited Bovine F1-Atpase
 gi|109157335|pdb|2CK3|F Chain F, Azide Inhibited Bovine F1-Atpase
 gi|145579794|pdb|2JDI|D Chain D, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579795|pdb|2JDI|E Chain E, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579796|pdb|2JDI|F Chain F, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|158428985|pdb|2JIZ|D Chain D, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428986|pdb|2JIZ|E Chain E, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428987|pdb|2JIZ|F Chain F, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428992|pdb|2JIZ|K Chain K, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428993|pdb|2JIZ|L Chain L, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428994|pdb|2JIZ|M Chain M, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158429002|pdb|2JJ1|D Chain D, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429003|pdb|2JJ1|E Chain E, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429004|pdb|2JJ1|F Chain F, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429009|pdb|2JJ1|K Chain K, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429010|pdb|2JJ1|L Chain L, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429011|pdb|2JJ1|M Chain M, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429016|pdb|2JJ2|D Chain D, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429017|pdb|2JJ2|E Chain E, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429018|pdb|2JJ2|F Chain F, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429023|pdb|2JJ2|K Chain K, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429024|pdb|2JJ2|L Chain L, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429025|pdb|2JJ2|M Chain M, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158431069|pdb|2V7Q|D Chain D, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431070|pdb|2V7Q|E Chain E, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431071|pdb|2V7Q|F Chain F, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|268612201|pdb|2WSS|D Chain D, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612202|pdb|2WSS|E Chain E, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612203|pdb|2WSS|F Chain F, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612210|pdb|2WSS|M Chain M, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612211|pdb|2WSS|N Chain N, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612212|pdb|2WSS|O Chain O, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
          Length = 482

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 86  IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 203

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 321

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 382 LQDYKSLQDIIAILG 396


>gi|302558368|ref|ZP_07310710.1| ATP synthase F1, beta subunit [Streptomyces griseoflavus Tu4000]
 gi|302475986|gb|EFL39079.1| ATP synthase F1, beta subunit [Streptomyces griseoflavus Tu4000]
          Length = 478

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 163/299 (54%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G+V N LG+ ++ D+    G+    I  K P     +   + F+TG++VID+ TP   G
Sbjct: 100 TGKVFNTLGEVLNVDEQY-TGE-RWPIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKG 157

Query: 162 QRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + I++      + K+
Sbjct: 158 GKIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKT 217

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +
Sbjct: 218 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 277

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 278 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 335

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++E+G YP VDPL S SR+ D  + +AD       + +++ ++++ +DI  I G
Sbjct: 336 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYNAAMRVKNILQKYKDLQDIIAILG 394


>gi|322707678|gb|EFY99256.1| ATP synthase beta chain [Metarhizium anisopliae ARSEF 23]
          Length = 517

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN  G PID    + K D  + I S+ P  +++    +   TGI+V+D+  P  
Sbjct: 127 ATLGRIINVTGDPIDERGPI-KTDKFLPIHSEPPEFIDQSTSAEILVTGIKVVDLLAPYA 185

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 186 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 244

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 245 QLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSE 304

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 305 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATT 362

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D     +E     + +  ++  ++  +
Sbjct: 363 FAHLDATTVLSRGISELGIYPAVDPLDSTSRMLDPRIVGEEHYNTATRVQQILQEYKSLQ 422

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 423 DIIAILG 429


>gi|148242960|ref|YP_001228117.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RCC307]
 gi|190358708|sp|A5GV55|ATPB_SYNR3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|147851270|emb|CAK28764.1| ATP synthase beta [Synechococcus sp. RCC307]
          Length = 488

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+P+D    + K D +  I    P   + +   K F+TGI+VID+  P   G
Sbjct: 99  LGRIMNVLGEPVDEQGPV-KTDATAPIHRSAPKLTDLETKPKVFETGIKVIDLLAPYRQG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------GD 212
            ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++        D
Sbjct: 158 GKVGLFGGAGMGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVINAD 217

Query: 213 NLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           +L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  E+
Sbjct: 218 DLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +   A   DE  K   ++   + R++E +D
Sbjct: 336 AHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGDEHYKTARAVQSTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|153007332|ref|YP_001381657.1| F0F1 ATP synthase subunit beta [Anaeromyxobacter sp. Fw109-5]
 gi|190358251|sp|A7HIX7|ATPB_ANADF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|152030905|gb|ABS28673.1| ATP synthase F1, beta subunit [Anaeromyxobacter sp. Fw109-5]
          Length = 481

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 162/306 (52%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR++N +G P+D    +    +    + +  P +  Q V+ + F+TGI+VID+  P   G
Sbjct: 96  GRILNVVGDPVDERGPVAS--VRKFPIHRPAPTLVDQNVKIEAFETGIKVIDLLAPYLRG 153

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL--GD 212
            +IG+F G+G+GK+ LL     +    +    + + VGER RE      E IE  +   D
Sbjct: 154 GKIGLFGGAGVGKTVLLMELVNNVAKKRGGFSVFAGVGERTREGNDLYHEMIESGVINKD 213

Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           +L KS  V+V    +E P  R    L+A+ IAEYF   +  ++LL +D+I RF  +  E+
Sbjct: 214 DLSKSQCVLVYGQMNEPPGARARVALSALAIAEYFRDEEKRDMLLFIDNIFRFTQAGSEV 273

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G IT+V ++ V  D+  DP   +  
Sbjct: 274 SALLGRIPSAVGYQPTLSTEMGELQERI--TSTKNGAITSVQAIYVPADDLTDPAPATAF 331

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R L E G YP VDPL S SR+ D     A+  ++   +   + R+++ +D
Sbjct: 332 AHLDATTVLSRKLTEIGIYPAVDPLDSTSRILDPLVVGAEHYQVAREVQETLQRYKDLQD 391

Query: 389 IRLIGG 394
           I  I G
Sbjct: 392 IIAILG 397


>gi|28461221|ref|NP_786990.1| ATP synthase subunit beta, mitochondrial precursor [Bos taurus]
 gi|114543|sp|P00829|ATPB_BOVIN RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|262118383|pdb|2W6E|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118384|pdb|2W6E|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118385|pdb|2W6E|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118390|pdb|2W6F|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118391|pdb|2W6F|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118392|pdb|2W6F|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118397|pdb|2W6I|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118398|pdb|2W6I|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118399|pdb|2W6I|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118406|pdb|2W6J|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118407|pdb|2W6J|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118408|pdb|2W6J|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262306977|pdb|2W6G|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306978|pdb|2W6G|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306979|pdb|2W6G|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306984|pdb|2W6H|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306985|pdb|2W6H|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306986|pdb|2W6H|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|162711|gb|AAA30395.1| F-1-ATPase beta-subunit precursor [Bos taurus]
 gi|94574271|gb|AAI16100.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Bos taurus]
 gi|296487629|gb|DAA29742.1| mitochondrial ATP synthase beta subunit precursor [Bos taurus]
          Length = 528

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 132 IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 190

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 191 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 249

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 250 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 309

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 310 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 367

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 368 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 427

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 428 LQDYKSLQDIIAILG 442


>gi|47605558|sp|Q9PTY0|ATPB_CYPCA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|5689156|dbj|BAA82837.1| ATP synthase beta-subunit [Cyprinus carpio]
          Length = 518

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P   +    ++   TGI+V+
Sbjct: 122 IRIPVGPETLGRIMNVIGEPIDERGPITTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 180

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 239

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 240 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 357

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 417

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 418 LQDYKSLQDIIAILG 432


>gi|226354914|ref|YP_002784654.1| V-type ATP synthase subunit B [Deinococcus deserti VCD115]
 gi|259710370|sp|C1CXU4|VATB_DEIDV RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|226316904|gb|ACO44900.1| putative V-type ATP synthase beta chain (V-type ATPase subunit B)
           [Deinococcus deserti VCD115]
          Length = 471

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 151/276 (54%), Gaps = 11/276 (3%)

Query: 94  RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           R+  S    GR  + LG+PIDG    + +  LS+   +  P A  R + E+  +TGI  I
Sbjct: 81  RLGVSKEMIGRRFDGLGRPIDGLPQVVAEQRLSINGQAMNPAA--RAKPEEFIQTGISTI 138

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206
           D+ T L  GQ++ +F+GSG+  + L +  AR            V+ + +G   REV  F 
Sbjct: 139 DVQTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L +SV+ +  +D+  + R + P  A+T AEY +   G +VL+IL  +T +  
Sbjct: 199 QEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCE 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI     E+P  RG+P  ++++L  L ER G  E + G++T V  + +  D+   PI
Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVEGKPGSVTQVPILSMPDDDITHPI 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G IV++R+L  +G +PP++PL S+SRL
Sbjct: 319 PDLTGYITEGQIVVDRTLNSKGVFPPINPLPSLSRL 354


>gi|23397307|gb|AAN31935.1| unknown protein [Arabidopsis thaliana]
          Length = 446

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 18/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    + K +  + I    P  ++    ++   TGI+V+D+  P  
Sbjct: 54  ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 112

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 113 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 171

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +
Sbjct: 172 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 231

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ S+L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 232 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 289

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 290 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 324


>gi|317154799|ref|YP_004122847.1| ATP synthase F1 subunit beta [Desulfovibrio aespoeensis Aspo-2]
 gi|316945050|gb|ADU64101.1| ATP synthase F1, beta subunit [Desulfovibrio aespoeensis Aspo-2]
          Length = 465

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 162/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
           GR++N +G+P D    +G       + + ++ P+   Q  + +  +TGI+V+D+  P   
Sbjct: 91  GRIMNVVGEPAD---EMGPIPCEKRMPIHRLAPSFTEQSTKVELLETGIKVVDLLIPFPK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G ++G+F G+G+GK+ +L     +       IS+   VGER RE  +   +      L+K
Sbjct: 148 GGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LTA+T AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 AALVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFVDNIFRFTQAGAEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S LDG 
Sbjct: 268 MPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSHLDGT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R+++E G YP VDPL S SR+ D     +        +  ++ +++E +DI  I G
Sbjct: 326 LVLSRAISELGIYPAVDPLDSTSRILDPHVIGEVHYATAREVQSVLQKYKELQDIIAILG 385


>gi|222150025|ref|YP_002550982.1| ATP synthase F1, beta subunit [Agrobacterium vitis S4]
 gi|221737007|gb|ACM37970.1| ATP synthase F1, beta subunit [Agrobacterium vitis S4]
          Length = 485

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 157/313 (50%), Gaps = 26/313 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR++N +G+P+D    LG    +    I    P  + +    +   TGI+V+D+  P  
Sbjct: 93  LGRILNVIGEPVD---ELGPVTTTARRAIHQPAPEYVEQSTESQILVTGIKVVDLLAPYA 149

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   + 
Sbjct: 150 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESKVN 208

Query: 216 -------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
                        K  +V    +E P  R    LT +TIAE F  KG +VL  +D+I RF
Sbjct: 209 VDPHENGGSAAGSKCALVYGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRF 268

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  D
Sbjct: 269 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTD 326

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VLNRS+AE+G YP VDPL S SR+ D     +E  ++   +   + 
Sbjct: 327 PAPATSFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQ 386

Query: 382 RFEETRDIRLIGG 394
           R++  +DI  I G
Sbjct: 387 RYKSLQDIIAILG 399


>gi|294790387|ref|ZP_06755545.1| ATP synthase F1, beta subunit [Scardovia inopinata F0304]
 gi|294458284|gb|EFG26637.1| ATP synthase F1, beta subunit [Scardovia inopinata F0304]
          Length = 495

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 147/273 (53%), Gaps = 9/273 (3%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    PP    +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 138 IHRAAPPFDQLESKTEMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197

Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +   +S+   VGER RE  + I E      L K+ +V    DE P  R   PLTA+T+AE
Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMEEAGVLGKTALVFGQMDEPPGTRLRVPLTALTMAE 257

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TST 315

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D
Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILD 375

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393
             +         + +  ++ R +E +D I LIG
Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408


>gi|73968432|ref|XP_531639.2| PREDICTED: similar to ATP synthase beta chain, mitochondrial
           precursor isoform 1 [Canis familiaris]
          Length = 527

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 140 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKG 198

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 199 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 257

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 258 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 317

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 318 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 375

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 376 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 435

Query: 389 IRLIGG 394
           I  I G
Sbjct: 436 IIAILG 441


>gi|163732295|ref|ZP_02139741.1| F0F1 ATP synthase subunit beta [Roseobacter litoralis Och 149]
 gi|161394593|gb|EDQ18916.1| F0F1 ATP synthase subunit beta [Roseobacter litoralis Och 149]
          Length = 474

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 165/319 (51%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   I       GR++N +G+PID    + + D    I  + P    +    +  +TGI+
Sbjct: 75  GPISIPVGNATLGRIMNVVGEPIDEKGPV-ESDEKRSIHQEAPAFAEQSTSSEVLETGIK 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201
           VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE    
Sbjct: 134 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDL 191

Query: 202 VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
             E IE  +   DNL +S V  V    +E P  R    LT +T+AE F  + G +VL  +
Sbjct: 192 YHEMIESAVIVPDNLTESKVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFV 251

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+V +V V 
Sbjct: 252 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKAGSITSVQAVYVP 309

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D     +E   V+  
Sbjct: 310 ADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPQVLGEEHYNVARD 369

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ R++  +DI  I G
Sbjct: 370 VQGILQRYKSLQDIIAILG 388


>gi|71370846|gb|AAZ30652.1| ATP synthase beta subunit [Lineus viridis]
          Length = 427

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +   D    I ++ P  +     ++   TGI+V+
Sbjct: 55  IRIPVGPETLGRIINVIGEPIDERGPV-PTDRRASIHAEAPEFVEMSVQQEILATGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 114 DMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MIEGGVINLKDDSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +E    +  +  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGEEHYTTARGVQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  +   +DI  I G
Sbjct: 351 LQDYRSLQDIIAILG 365


>gi|296413156|ref|XP_002836282.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630095|emb|CAZ80473.1| unnamed protein product [Tuber melanosporum]
          Length = 480

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 158/304 (51%), Gaps = 16/304 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PID    +    ++  I ++ PP +++    +   TGI+V+D+  P   G 
Sbjct: 93  GRIMNVTGDPIDERGPIKAAKMA-PIHAEAPPFVDQSTTAEILVTGIKVVDLLAPYARGG 151

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         D
Sbjct: 152 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQLD 210

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 211 GDSKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 270

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  ++ ++ ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 271 LLGRIPSAVGYQPTLSVDMGQMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAH 328

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E G YP VDPL S SR+ D     +E     + +  ++  ++  +DI 
Sbjct: 329 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPKIVGEEHYNTATRVQRMLQEYKSLQDII 388

Query: 391 LIGG 394
            I G
Sbjct: 389 AILG 392


>gi|254804251|ref|YP_003082472.1| ATP synthase beta chain [Neisseria meningitidis alpha14]
 gi|254667793|emb|CBA03755.1| ATP synthase beta chain [Neisseria meningitidis alpha14]
          Length = 465

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|261378159|ref|ZP_05982732.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685]
 gi|269145622|gb|EEZ72040.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685]
          Length = 465

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSATELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|253580458|ref|ZP_04857723.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848188|gb|EES76153.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39BFAA]
          Length = 465

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG  +D   SL +G+    ++ + PP    Q+   +  +TGI+VID+  P   
Sbjct: 85  LGRLFNVLGDTVDDGPSL-EGEQKW-VIHRDPPDFEHQKPAVEILETGIKVIDLLAPYAK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+    ++   +     I + VGER RE  +   +      L+K
Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEK 202

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R     T +T+AEYF   +  +VLL +D+I RF  +  E++   G 
Sbjct: 203 TALVFGQMNEPPGSRMRVAETGLTMAEYFRDEEHRDVLLFIDNIFRFVQAGSEVSALLGR 262

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD  
Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKD--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R + E+G YP VDPL S SR+ +     +E  ++   +  ++ +++E +DI  I G
Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEPDVVGEEHYEVARKVQEILQKYKELQDIIAILG 380


>gi|302567343|gb|ADL41370.1| ATP synthase B subunit [Parallela novae-zelandiae]
          Length = 401

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +G  + S+ I    P  ++       F+TGI+V+D+  P  
Sbjct: 41  ATLGRIFNVLGEPVDNLGPVGNQE-SLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYR 99

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 100 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 159

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 160 EKNLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQA 217

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 218 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 275

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   EK  +   ++   + R+
Sbjct: 276 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYETAQNVKRTLQRY 334

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 335 KELQDIIAILG 345


>gi|23503589|dbj|BAC20391.1| ATP synthase beta-subunit [Scenedesmus quadricauda]
          Length = 376

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 27/327 (8%)

Query: 87  VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEK 143
           VF  G+   +       GR+ N LG+P+D   +LG  K + S+ I    P  ++      
Sbjct: 15  VFDTGKPLSVPVGKATLGRIFNVLGEPVD---NLGPVKNEESLPIHRTAPAFVDLDTRLS 71

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGR 200
            F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER R
Sbjct: 72  IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTR 131

Query: 201 EVREF----------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
           E  +           +E  L D+  K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 132 EGNDLYTEMKESGVIVEKNLTDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNK 189

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+
Sbjct: 190 QDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITS 247

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E
Sbjct: 248 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGE 306

Query: 370 KKL--VSSLTHLIHRFEETRDIRLIGG 394
           K      S+   + R++E +DI  I G
Sbjct: 307 KHYGCAQSVKRTLQRYKELQDIIAILG 333


>gi|303325905|ref|ZP_07356348.1| ATP synthase F1, beta subunit [Desulfovibrio sp. 3_1_syn3]
 gi|302863821|gb|EFL86752.1| ATP synthase F1, beta subunit [Desulfovibrio sp. 3_1_syn3]
          Length = 473

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR++N +G+P+D    LG    +    I    P   ++    +  +TGI+V+D+  P
Sbjct: 89  AAVGRILNVIGRPVD---ELGPVNAEKYYPIHRPAPGFTDQNTKVELLETGIKVVDLLVP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G ++G+F G+G+GK+ +L    +  A+      V    VGER RE  +   +     
Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFAG-VGERTREGNDLYNELKEAG 204

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
            L+++ +V    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++ 
Sbjct: 205 VLERATLVYGQMNEPPGARARVALTALACAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ ++L  L ERI  +    G+IT+V +V V  D+  DP   +  S 
Sbjct: 265 LLGRMPSAVGYQPTLGTDLGALQERI--TSTNSGSITSVQAVYVPADDLTDPAPATTFSH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIR 390
           LDG +VL+R +AE G YP VDPL S SR+ D     +E   V+    ++  +++E +DI 
Sbjct: 323 LDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHYSVARRVQMVLQKYKELQDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|303231155|ref|ZP_07317893.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-049-V-Sch6]
 gi|302514062|gb|EFL56066.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-049-V-Sch6]
          Length = 474

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRIFNVLGETVDHDSAPVVADEMWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     DE   V+  +  ++ ++ + +DI  I G
Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHILGDEHYNVARGVQEVLQKYRDLQDIIAILG 388


>gi|261400612|ref|ZP_05986737.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970]
 gi|313669152|ref|YP_004049436.1| ATP synthase beta chain [Neisseria lactamica ST-640]
 gi|269209698|gb|EEZ76153.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970]
 gi|309379543|emb|CBX21909.1| ATP synthase F1, beta subunit [Neisseria lactamica Y92-1009]
 gi|313006614|emb|CBN88080.1| ATP synthase beta chain [Neisseria lactamica 020-06]
          Length = 465

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|302529782|ref|ZP_07282124.1| ATP synthase F1, beta subunit [Streptomyces sp. AA4]
 gi|302438677|gb|EFL10493.1| ATP synthase F1, beta subunit [Streptomyces sp. AA4]
          Length = 476

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 166/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG+ +D +   G+ DL    + + PP  ++ +   +  +TG++V+D+ TP   G
Sbjct: 98  GHVYNALGECLD-EPGYGE-DLERWGIHRNPPPFDQLEGKTEMLETGLKVVDLLTPYVQG 155

Query: 162 QRIGVFAGSGIGKSTLL-SMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      +  +
Sbjct: 156 GKIGLFGGAGVGKTVLIKEMITRVARNFGGTSVFAGVGERTREGNDLFLEMSEDGVINDT 215

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 216 ALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 275

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + LD   
Sbjct: 276 PSAVGYQPTLADEMGQLQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATT 333

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L+RS+ ++G +P VDPLAS S + D A    D  ++ S +  ++ +++E +DI  I G
Sbjct: 334 ELSRSVFQKGIFPAVDPLASTSTILDPAIVGEDHYRVASEVIRILQKYKELQDIIAILG 392


>gi|195478613|ref|XP_002086515.1| GE23170 [Drosophila yakuba]
 gi|194186305|gb|EDW99916.1| GE23170 [Drosophila yakuba]
          Length = 627

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 161/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R++      GR++N +G PID D    K D    I ++ P   +     +   TGI+VI
Sbjct: 178 IRVAVGKAVLGRILNVVGDPID-DRGEIKSDYYSFIHNEAPELTDLSVKPEILVTGIKVI 236

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE      E
Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295

Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D   K V+V    +E P  R    LT +TIAEYF    G +VLL +D+I 
Sbjct: 296 MIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 355

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+ 
Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
           +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   
Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 473

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 474 LQAYKSLQDIIAILG 488


>gi|145342447|ref|XP_001416194.1| ATP synthase beta chain, mitochondrial precursor [Ostreococcus
           lucimarinus CCE9901]
 gi|144576419|gb|ABO94487.1| ATP synthase beta chain, mitochondrial precursor [Ostreococcus
           lucimarinus CCE9901]
          Length = 530

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 158/310 (50%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +     S+ I  + PP +++    +   TGI+V+D+  P  
Sbjct: 139 ATLGRIMNVIGEPIDECGPIST-STSLGIHREAPPFVDQSTEMEMLVTGIKVVDLLAPYQ 197

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+     L++  A+      V    VGER RE      E IE    
Sbjct: 198 KGGKIGLFGGAGVGKTVFIMELINNIAKGHGGFSVFAG-VGERTREGNDLYHEMIEGGVI 256

Query: 209 YLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
            LGD     K  +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +
Sbjct: 257 KLGDQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLFFVDNIFRFTQA 316

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V ++ V  D+  DP  
Sbjct: 317 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAIYVPADDLTDPAP 374

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+RS+AE G YP VDPL S SR+       DE       +  ++  ++
Sbjct: 375 ATTFAHLDATTVLSRSIAEIGIYPAVDPLDSTSRMLSPLTLGDEHYNTARGVQKILQDYK 434

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 435 NLQDIIAILG 444


>gi|221069420|ref|ZP_03545525.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1]
 gi|220714443|gb|EED69811.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1]
          Length = 469

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 20/341 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G +V + G     P      GR+++ LG PID    + +  L+  
Sbjct: 51  VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGDVDQA-LTAP 109

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+ +P   G ++G+F G+G+GK+     L++  A+
Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLISPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD---------NLKKSVVVVATSDESPILRKMA 234
                 V    VGER RE  +F  + + D         N  K  +V    +E P  R   
Sbjct: 170 GHGGLSVFAG-VGERTREGNDFYHE-MSDAGVVNQANLNESKVAMVYGQMNEPPGNRLRV 227

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ +L 
Sbjct: 228 ALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQ 287

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL
Sbjct: 288 ERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPL 345

Query: 355 ASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            S SR  D     +E  K+   +   + R++E RDI  I G
Sbjct: 346 DSTSRQLDPQVVGEEHYKVARQVQGTLQRYKELRDIIAILG 386


>gi|82889077|gb|ABB92859.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
 gi|82889079|gb|ABB92860.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
 gi|82889081|gb|ABB92861.1| ATP synthase F1 beta subunit [Wolbachia pipientis]
          Length = 310

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 20/272 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GRV N +G+ ID    L KG   +E + + PP+   Q++ E+   TGI+VID+  P   G
Sbjct: 18  GRVFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 76

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 77  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVIN 134

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF   +  +VL  +D+I RF  +  
Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 194

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTAGSITSVQAIYVPADDLTDPAPAT 252

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             S LD   VL+R +AE G YP VDPL S S+
Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQ 284


>gi|91795097|ref|YP_564748.1| F0F1 ATP synthase subunit beta [Shewanella denitrificans OS217]
 gi|123165633|sp|Q12HQ1|ATPB_SHEDO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91717099|gb|ABE57025.1| ATP synthase F1, beta subunit [Shewanella denitrificans OS217]
          Length = 463

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 170/329 (51%), Gaps = 17/329 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +  + I    P   ++    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGEPIDECGEIGEEERYV-IHRSAPSYEDQSSSTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    L+ +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDIIAI- 379

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419
               G+D + D+   AV +   I  FL Q
Sbjct: 380 ---LGMDELSDEDKTAVARARKIERFLSQ 405


>gi|194873278|ref|XP_001973175.1| GG15949 [Drosophila erecta]
 gi|190654958|gb|EDV52201.1| GG15949 [Drosophila erecta]
          Length = 630

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 161/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R++      GR++N +G PID D    K D    I ++ P   +     +   TGI+VI
Sbjct: 178 IRVAVGKAVLGRILNVVGDPID-DRGEIKSDFYSFIHNEAPELTDLSVKPEILVTGIKVI 236

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE      E
Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295

Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D   K V+V    +E P  R    LT +TIAEYF    G +VLL +D+I 
Sbjct: 296 MIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 355

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+ 
Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
           +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   
Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 473

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 474 LQAYKSLQDIIAILG 488


>gi|47575824|ref|NP_001001256.1| mitochondrial ATP synthase beta subunit [Xenopus (Silurana)
           tropicalis]
 gi|45767611|gb|AAH67388.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Xenopus (Silurana) tropicalis]
 gi|89269884|emb|CAJ83426.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Xenopus (Silurana) tropicalis]
          Length = 525

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 16/282 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 129 IRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 187

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 188 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 246

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 247 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 306

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 307 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 364

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D
Sbjct: 365 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 406


>gi|3660252|pdb|1NBM|E Chain E, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
          Length = 480

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 86  IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 203

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIXVPADDL 321

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 382 LQDYKSLQDIIAILG 396


>gi|282899706|ref|ZP_06307670.1| ATP synthase F1, beta subunit [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195585|gb|EFA70518.1| ATP synthase F1, beta subunit [Cylindrospermopsis raciborskii
           CS-505]
          Length = 482

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I  + P   + +     F+TGI+V+D+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDNQGPVNNEE-TLPIHRESPKLTDLETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  +  
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +NL +S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 KENLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +   +    E   +  S+   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPSIVGKEHYDIARSVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|170077372|ref|YP_001734010.1| F0F1 ATP synthase subunit beta [Synechococcus sp. PCC 7002]
 gi|169885041|gb|ACA98754.1| ATP synthase beta chain [Synechococcus sp. PCC 7002]
          Length = 483

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +G  + S  I    P           F+TGI+V+D+ TP   G
Sbjct: 96  LGRIFNVLGEPVDEKGEVGAEETS-PIHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRG 154

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL--GD 212
            +IG+F G+G+GK+ ++     +   +   +S+   VGER RE      E IE  +   D
Sbjct: 155 GKIGLFGGAGVGKTVIMMELINNIATNHGGVSVFAGVGERTREGNDLYNEMIESGVINPD 214

Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL  S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 215 NLNDSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEV 274

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 275 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 332

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388
           + LDG  VL+R+LA +G YP VDPL S S +   +    D      ++   + R++E +D
Sbjct: 333 AHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPSIVGEDHYNTARAVQSTLQRYKELQD 392

Query: 389 IRLIGG 394
           I  I G
Sbjct: 393 IIAILG 398


>gi|23272966|gb|AAH37127.1| Atp5b protein [Mus musculus]
          Length = 533

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 145 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 203

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 204 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 262

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 263 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 322

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 323 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 380

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 381 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 440

Query: 389 IRLIGG 394
           I  I G
Sbjct: 441 IIAILG 446


>gi|296170251|ref|ZP_06851844.1| ATP synthase F1 sector beta subunit [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895127|gb|EFG74845.1| ATP synthase F1 sector beta subunit [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 488

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 162/301 (53%), Gaps = 15/301 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLC 159
           G V NALG   D  D  G G D     + + PPA      R E   +TG++V+D+ TP  
Sbjct: 107 GHVFNALG---DCLDKPGYGEDFEHWSIHRKPPAFEELEPRTEM-LETGLKVVDLLTPYV 162

Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    D LK
Sbjct: 163 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELKEADVLK 222

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
            + +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G
Sbjct: 223 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLG 282

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD 
Sbjct: 283 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 340

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L+RS+  +G +P VDPLAS S + D +   DE  ++   +  ++ R+++ +DI  I 
Sbjct: 341 TTELSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAIL 400

Query: 394 G 394
           G
Sbjct: 401 G 401


>gi|296313936|ref|ZP_06863877.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768]
 gi|296839474|gb|EFH23412.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768]
          Length = 465

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSATTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|171110|gb|AAA34444.1| F1-ATPase beta-subunit precursor [Saccharomyces cerevisiae]
          Length = 511

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K  L   I +  P    +    +  +TGI+V+D+  P   G
Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAG-VGERTREGNDLYREMKETGV-IN 241

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPSPSTSF 359

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +D
Sbjct: 360 AHLDASSVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419

Query: 389 IRLIGG 394
           I  I G
Sbjct: 420 IIAILG 425


>gi|323450237|gb|EGB06119.1| hypothetical protein AURANDRAFT_59236 [Aureococcus anophagefferens]
          Length = 473

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 161/315 (51%), Gaps = 20/315 (6%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GR++N +G+ +D D    K  +   I    P  + + + ++   TGI+V+D+ 
Sbjct: 80  PVGPECLGRIVNVIGEAVD-DAGPVKTKIQFPIHRAPPTFVEQGKTQEILTTGIKVVDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ ++     +   +     + + VGER RE      E IE 
Sbjct: 139 APYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIES 198

Query: 209 ---YLGDNL----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
               +GD       K+ +V    +E P  R    LT +TIAEYF   +G +VL  +D+I 
Sbjct: 199 GVIKIGDGHDTTGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLFFVDNIF 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+ 
Sbjct: 259 RFTQAGAEVSALLGRIPSAVGYQPTLATDMGGLQERI--TSTTKGSITSVQAVYVPADDL 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R +A  G YP VDPL S SR+ D     +E   V+ S+  L
Sbjct: 317 TDPAPATTFAHLDAQTVLSRDIASLGIYPAVDPLDSSSRMMDPRIVGEEHYGVARSVQKL 376

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 377 LQDYKSLQDIIAILG 391


>gi|297183580|gb|ADI19707.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 473

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 18/330 (5%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  GD V   G   ++       GR+IN +G+PID    +   D S  I    P    
Sbjct: 61  EGLKRGDEVIDTGTPIKVPVGPETLGRIINVIGEPIDQKGPIKTKD-SWPIHRPAPLFTE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIIS 193
           +    +   TGI+V+D+  P   G ++G+F G+G+GK+     L++  A++     V   
Sbjct: 120 QSTETEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELINNIAKAHGGFSVFAG 179

Query: 194 LVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245
            VGER RE  +   + +   +        K+ +V    +E P  R    LT +T+AEYF 
Sbjct: 180 -VGERTREGNDLYHEMIESGVIKPDGKGSKAALVYGQMNEPPGARSRVGLTGLTVAEYFR 238

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 239 DQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKG 296

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 297 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRI 356

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE  ++   +  ++  ++  +DI  I G
Sbjct: 357 VGDEHYRVAREVQKILQTYKSLQDIIAILG 386


>gi|74204509|dbj|BAE35331.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|74197074|dbj|BAE35088.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|242129046|gb|ACS83602.1| ATP synthase beta subunit 1 [Gossypium hirsutum]
          Length = 557

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 163/310 (52%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    L K D  + I  + P  +++   ++   TGI+V+D+  P  
Sbjct: 165 ATLGRIINVIGEPIDEKGEL-KTDHFLPIHREAPAFVDQATEQQILVTGIKVVDLLAPYQ 223

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 224 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 282

Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+     K  +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 283 KLGEKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 342

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 343 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 400

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SR+       +E       +  ++  ++
Sbjct: 401 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 460

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 461 NLQDIIAILG 470


>gi|260800391|ref|XP_002595117.1| hypothetical protein BRAFLDRAFT_113766 [Branchiostoma floridae]
 gi|229280359|gb|EEN51128.1| hypothetical protein BRAFLDRAFT_113766 [Branchiostoma floridae]
          Length = 523

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 19/316 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +     +  I +  P  +     ++  +TGI+V+
Sbjct: 128 IRIPVGPETLGRIINVIGEPIDERGPV-DSKKTAAIHADAPEFVEMSVEQEILETGIKVV 186

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 187 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 245

Query: 205 FIE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
            IE    D  GD   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I
Sbjct: 246 MIESGVIDLKGDK-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNI 304

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+
Sbjct: 305 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 362

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     +E   V+ S+  
Sbjct: 363 LTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSTSRILDPNIVGEEHYTVARSVQK 422

Query: 379 LIHRFEETRDIRLIGG 394
            +  ++  +DI  I G
Sbjct: 423 TLQDYKSLQDIIAILG 438


>gi|74139650|dbj|BAE40961.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|146278237|ref|YP_001168396.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17025]
 gi|189081340|sp|A4WUM7|ATPB_RHOS5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145556478|gb|ABP71091.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17025]
          Length = 475

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +  GD +  I    P    +    +   TGI+VID+  P  
Sbjct: 85  ATLGRILNVIGEPIDEKGPV-SGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYS 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE  +   + +    
Sbjct: 144 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIDSGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL +S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 202 IKIDNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP  
Sbjct: 262 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R+++E G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 320 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEHYNVARAVQGILQRYK 379

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 380 SLQDIIAILG 389


>gi|303230068|ref|ZP_07316840.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-134-V-Col7a]
 gi|302515278|gb|EFL57248.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-134-V-Col7a]
          Length = 474

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRIFNVLGETVDHDSAPVVADEMWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     DE   V+  +  ++ ++ + +DI  I G
Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGDEHYNVARGVQEVLQKYRDLQDIIAILG 388


>gi|260888964|ref|ZP_05900227.1| ATP synthase F1, beta subunit [Leptotrichia hofstadii F0254]
 gi|260861411|gb|EEX75911.1| ATP synthase F1, beta subunit [Leptotrichia hofstadii F0254]
          Length = 465

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 160/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+ +D  + L   D+  E + K  P+  +Q  +    +TGI+V+D+  P 
Sbjct: 83  ATLGRIFNVLGEAVDDGEKL-DADVLRESIHKDAPSFEQQGTDSEILETGIKVVDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+   +      +
Sbjct: 142 LKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMTESGVI 201

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LTA+T+AEYF  K G NVLL +D+I RF  +  E++   
Sbjct: 202 DKTALVYGQMNEPPGARLRVGLTALTMAEYFRDKEGQNVLLFIDNIFRFTQAGSEVSALL 261

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD
Sbjct: 262 GRMPSAVGYQPNLATEMGALQERI--TSTSTGSITSVQAVYVPADDLTDPAPATTFAHLD 319

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+R +A  G YP VDPL S SR+ +     +E  K+      ++ R++E +DI  I
Sbjct: 320 ATTVLSRQIASLGIYPAVDPLDSTSRILEPEIVGNEHYKIARETQKVLQRYKELQDIIAI 379

Query: 393 GG 394
            G
Sbjct: 380 LG 381


>gi|50954454|ref|YP_061742.1| F0F1 ATP synthase subunit beta [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|81826688|sp|Q6AG58|ATPB_LEIXX RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|50950936|gb|AAT88637.1| ATP synthase, beta chain [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 487

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 151/273 (55%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PP+ +  +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 131 IHRQPPSFDHLESKTQLFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMVQRVAQ 190

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D   +S+   VGER RE  + I +        K+ +V    DE P  R    L+A+T+AE
Sbjct: 191 DHGGVSVFAGVGERTREGNDLIHEMEEAGVFDKTALVFGQMDEPPGTRLRVALSALTMAE 250

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 251 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGLLQERITSTRG 310

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL S SR+ D
Sbjct: 311 H--SITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASKGLYPAVDPLTSTSRILD 368

Query: 363 KAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             +  AD  ++ +++  ++ + +E ++I  I G
Sbjct: 369 PRYLGADHYRVATTVKQILQKNKELQEIIAILG 401


>gi|15677764|ref|NP_274928.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis MC58]
 gi|81857552|sp|Q9JXQ2|ATPB_NEIMB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|7227192|gb|AAF42263.1| ATP synthase F1, beta subunit [Neisseria meningitidis MC58]
 gi|308390032|gb|ADO32352.1| ATP synthase beta chain [Neisseria meningitidis alpha710]
 gi|316985556|gb|EFV64503.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76]
 gi|325129472|gb|EGC52302.1| ATP synthase F1, beta subunit [Neisseria meningitidis OX99.30304]
 gi|325139587|gb|EGC62127.1| ATP synthase F1, beta subunit [Neisseria meningitidis CU385]
 gi|325200985|gb|ADY96440.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76]
 gi|325201427|gb|ADY96881.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240149]
 gi|325207408|gb|ADZ02860.1| ATP synthase F1, beta subunit [Neisseria meningitidis NZ-05/33]
          Length = 465

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|254788504|ref|YP_003075933.1| F0F1 ATP synthase subunit beta [Teredinibacter turnerae T7901]
 gi|259585454|sp|C5BKJ5|ATPB_TERTT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|237687362|gb|ACR14626.1| ATP synthase F1, beta subunit [Teredinibacter turnerae T7901]
          Length = 470

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG PID    +G+ +  M I  K P            +TG++VID+  P   G 
Sbjct: 84  GRIMDVLGNPIDECGPIGEQE-RMPIHRKAPAYDELSSTTDLLETGVKVIDLVCPFAKGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213
           ++G+F G+G+GK+  +     +   +   +S+   VGER RE  +F  +         +N
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIALEHSGLSVFAGVGERTREGNDFYHEMQESGVVNVEN 202

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
            K+S V  V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 203 FKESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A +G YP +DPL S SR  D     A+   +   +  ++ R++E +DI 
Sbjct: 321 LDSTVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGAEHYDVARGVQSVLQRYKELKDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|119350455|gb|ABL63178.1| AtpB [Bracteacoccus giganteus]
          Length = 383

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I  + P  ++       F+TGI+V+D+  P  
Sbjct: 29  ATLGRIFNVLGEPVDNMGPVNNQE-TLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           E  LGD+  K  +V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +
Sbjct: 148 EKNLGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDANKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   EK      ++   + R+
Sbjct: 264 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|89574025|gb|ABD77238.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Oryctolagus cuniculus]
          Length = 422

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 57  LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 115

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 116 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 174

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 175 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 234

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 235 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 292

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 293 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 352

Query: 389 IRLIGG 394
           I  I G
Sbjct: 353 IIAILG 358


>gi|31980648|ref|NP_058054.2| ATP synthase subunit beta, mitochondrial precursor [Mus musculus]
 gi|20455479|sp|P56480|ATPB_MOUSE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|12845667|dbj|BAB26846.1| unnamed protein product [Mus musculus]
 gi|26350917|dbj|BAC39095.1| unnamed protein product [Mus musculus]
 gi|28302366|gb|AAH46616.1| ATP synthase, H+ transporting mitochondrial F1 complex, beta
           subunit [Mus musculus]
 gi|74139742|dbj|BAE31720.1| unnamed protein product [Mus musculus]
 gi|74141200|dbj|BAE35911.1| unnamed protein product [Mus musculus]
 gi|74151428|dbj|BAE38829.1| unnamed protein product [Mus musculus]
 gi|74151806|dbj|BAE29691.1| unnamed protein product [Mus musculus]
 gi|74185118|dbj|BAE39161.1| unnamed protein product [Mus musculus]
 gi|74189002|dbj|BAE39267.1| unnamed protein product [Mus musculus]
 gi|74195964|dbj|BAE30540.1| unnamed protein product [Mus musculus]
 gi|74198581|dbj|BAE39769.1| unnamed protein product [Mus musculus]
 gi|74213430|dbj|BAE35529.1| unnamed protein product [Mus musculus]
 gi|74216691|dbj|BAE37764.1| unnamed protein product [Mus musculus]
 gi|74216945|dbj|BAE26587.1| unnamed protein product [Mus musculus]
 gi|74219911|dbj|BAE40537.1| unnamed protein product [Mus musculus]
 gi|74223230|dbj|BAE40749.1| unnamed protein product [Mus musculus]
 gi|74223633|dbj|BAE28692.1| unnamed protein product [Mus musculus]
 gi|74227679|dbj|BAE35689.1| unnamed protein product [Mus musculus]
 gi|148692595|gb|EDL24542.1| ATP synthase, H+ transporting mitochondrial F1 complex, beta
           subunit [Mus musculus]
          Length = 529

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|319893054|ref|YP_004149929.1| ATP synthase beta chain [Staphylococcus pseudintermedius HKU10-03]
 gi|317162750|gb|ADV06293.1| ATP synthase beta chain [Staphylococcus pseudintermedius HKU10-03]
 gi|323463891|gb|ADX76044.1| ATP synthase F1, beta subunit [Staphylococcus pseudintermedius
           ED99]
          Length = 470

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GRV N LG+ ID ++ +    +  + + +  P  +    E +  +TGI+V+D+  P 
Sbjct: 87  ATLGRVFNVLGEHIDLEEPIDAA-VRRDPIHREAPKFDELSTEVEILETGIKVVDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E      +
Sbjct: 146 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 AKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+ +L ERI  +   KG++T++ +V V  D++ DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
               L R L+E G YP VDPLAS SR  +      E   V+  +   + ++ E +DI  I
Sbjct: 324 ATTNLERKLSEMGIYPAVDPLASTSRALEPTIVGQEHYDVARQVQSTLQKYRELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|4519324|dbj|BAA75577.1| ATP synthase beta-subunit [Astrephomene perforata]
          Length = 376

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   D ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVIFDD-TLPIHRTAPTFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPACVN 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   + SS+  ++ R++E
Sbjct: 266 TFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSVASSVKKVLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|28940|emb|CAA27246.1| unnamed protein product [Homo sapiens]
 gi|219654|dbj|BAA00016.1| F1 beta subunit [Homo sapiens]
 gi|355039|prf||1202298A ATPase beta,F1
          Length = 539

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 151 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 209

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 210 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 268

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    ++ P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 269 KDATSKVALVYGQMNQPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 328

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 329 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 386

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 387 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 446

Query: 389 IRLIGG 394
           I  I G
Sbjct: 447 IIAILG 452


>gi|34500020|gb|AAQ73592.1| ATP synthase beta subunit [Actinobacillus delphinicola]
          Length = 444

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 153/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  +    I    P   ++    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGQPIDQKGPIG-AEEEWSIHRAAPSYEDQANSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +      L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSKVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAGGYQPTLAEEMGGLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G  P VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGILPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGMLQRYKELKDIIAILG 376


>gi|34500014|gb|AAQ73589.1| ATP synthase beta subunit [Bisgaard Taxon 17]
          Length = 444

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G  + +  I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDERGEIG-AEENWSIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G + 
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMR 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFTHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|77462850|ref|YP_352354.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides 2.4.1]
 gi|126461743|ref|YP_001042857.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17029]
 gi|221638720|ref|YP_002524982.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides KD131]
 gi|332557741|ref|ZP_08412063.1| F0F1 ATP synthase subunit beta' [Rhodobacter sphaeroides WS8N]
 gi|118573736|sp|Q3J431|ATPB1_RHOS4 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358214|sp|A3PIB9|ATPB1_RHOS1 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|77387268|gb|ABA78453.1| F1-ATP synthase beta subunit [Rhodobacter sphaeroides 2.4.1]
 gi|126103407|gb|ABN76085.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17029]
 gi|221159501|gb|ACM00481.1| ATP synthase subunit beta [Rhodobacter sphaeroides KD131]
 gi|332275453|gb|EGJ20768.1| F0F1 ATP synthase subunit beta' [Rhodobacter sphaeroides WS8N]
          Length = 475

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    LG+   +  I    P    +    +   TGI+VID+  P  
Sbjct: 85  ATLGRILNVIGEPIDEKGDLGEAS-TRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYS 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211
            G +IG+F G+G+GK+ L+      +   KV     + + VGER RE  +   + +    
Sbjct: 144 KGGKIGLFGGAGVGKTVLIMELI--NNIAKVHSGYSVFAGVGERTREGNDLYHEMIESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL +S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 202 IKIDNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP  
Sbjct: 262 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R+++E G YP VDPL S SR+ D     +E   V+ ++  ++ R++
Sbjct: 320 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEHYNVARAVQGILQRYK 379

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 380 SLQDIIAILG 389


>gi|313504227|gb|ADR63863.1| ATP synthase B subunit [Parallela transversalis]
          Length = 399

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +G  + S+ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 48  GRIFNVLGEPVDNLGPVGNQE-SLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 106

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 107 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 166

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 167 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 224

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 225 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 282

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   EK      ++   + R++E 
Sbjct: 283 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 341

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 342 QDIIAILG 349


>gi|325677814|ref|ZP_08157456.1| ATP synthase F1, beta subunit [Ruminococcus albus 8]
 gi|324110368|gb|EGC04542.1| ATP synthase F1, beta subunit [Ruminococcus albus 8]
          Length = 468

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 157/297 (52%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+P+D   +    +   EI  + P    +    +  +TGI+VID+  P   G +
Sbjct: 90  RMFNLLGEPVDNLPAPENAE-RWEIHREPPTYEEQTAANEILETGIKVIDLIAPYLKGGK 148

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      + K+V+
Sbjct: 149 IGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGERTREGNDLYWEMKESGVIDKTVL 208

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 209 VYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 269 AVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +RS+A  G +P VDPL S SR+       +E   V+  +  ++ R+ E +DI  I G
Sbjct: 327 SRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVARQVQSILQRYVELQDIIAIMG 383


>gi|218188864|gb|EEC71291.1| hypothetical protein OsI_03305 [Oryza sativa Indica Group]
          Length = 625

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 165 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 219

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 220 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 278

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 279 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 338

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 339 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 396

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 397 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 456

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 457 QNYKNLQDIIAILG 470


>gi|119350457|gb|ABL63179.1| AtpB [Bracteacoccus minor]
          Length = 392

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   + ++ I  + P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNMGPVNNQE-TLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           LGD+  K  +V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +  E
Sbjct: 158 LGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDANKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   EK      ++   + R++E 
Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|54310642|ref|YP_131662.1| F0F1 ATP synthase subunit beta [Photobacterium profundum SS9]
 gi|81828648|sp|Q6LLG8|ATPB1_PHOPR RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|46915085|emb|CAG21860.1| Putative AtpD, ATP synthase F1, beta subunit [Photobacterium
           profundum SS9]
          Length = 468

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G+ +    I  + P    +       +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGEPIDECGEIGE-EQRYAIHREAPSYEEQSNETSLLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK- 215
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    NL+ 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNLEN 205

Query: 216 ----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 206 PSESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 265

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 266 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP +DPL S SR+ D      E   +   +  L+ R++E +DI 
Sbjct: 324 LDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELKDII 383

Query: 391 LIGG 394
            I G
Sbjct: 384 AILG 387


>gi|126661087|ref|ZP_01732169.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110]
 gi|126617631|gb|EAZ88418.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110]
          Length = 473

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 12/317 (3%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNR 138
           ++ G  V + G+  ++       GRV N  G+ IDG +++ + +     + +VP P   R
Sbjct: 70  LARGSRVINLGKPLQVPVGKQTLGRVFNVFGETIDGKEAITEANWRS--IHQVPLPLQQR 127

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
                   TGI+ IDI TP+  G + G+F G+G+GK+ L++    +       ISL   +
Sbjct: 128 STTSDILATGIKAIDILTPIEQGGKAGLFGGAGVGKTVLITEMIHNMVSQYQGISLFCGI 187

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253
           GER RE  E   +      L  ++++    DE P  R      A+T+AEYF  +   +VL
Sbjct: 188 GERNREAEELYREMQDAGVLDNTIMLFGQMDEPPGARFRVGHAALTMAEYFRDELKQDVL 247

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++D+I RF  + +E++   G LP   GY  ++ +EL  L ERI  +    G+IT+V +V
Sbjct: 248 LLMDNIFRFIQAGQEVSGLMGRLPSRVGYQPTLGTELAELEERI--TNTATGSITSVQAV 305

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372
            V  D+  DP A      L   IVL+R  A EG YP +DPL S S++       +    +
Sbjct: 306 YVPADDFTDPAAVQTFGHLSASIVLSRKRASEGLYPAIDPLQSGSKMLSPTIVGERHYNI 365

Query: 373 VSSLTHLIHRFEETRDI 389
              +   +  +E+ +DI
Sbjct: 366 AQGIKSTLASYEDLKDI 382


>gi|300669387|dbj|BAJ11492.1| ATP synthase beta-subunit [Chloromonas pseudoplatyrhyncha]
          Length = 376

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + S+ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEASLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKDGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 321 RYKELQDIIAILG 333


>gi|258690452|gb|ACV87988.1| ATP synthase beta subunit [Aphrocallistes vastus]
          Length = 426

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 15/305 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G PID    +G  +    I  + P  +     +   +TGI+V+D+  P   G
Sbjct: 63  LGRIINVIGDPIDERGPIGS-EHEANIHQEAPEFIEMSVAQNILETGIKVVDLLAPYARG 121

Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDY-------LG 211
            +IG+F G+G+GK+ L+        S      + + VGER RE  +   +        L 
Sbjct: 122 GKIGLFGGAGVGKTVLIMELINNIASAHGGYSVFAGVGERTREGNDLYHEMIATKVISLD 181

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT + +AE+F  K G +VLL +D+I RF  +  E++
Sbjct: 182 DDKSKVSLVYGQMNEPPGARARVCLTGLAVAEHFRDKEGQDVLLFIDNIFRFTQAGSEVS 241

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 242 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S SR+ D     A+   +   +  ++  ++  +DI
Sbjct: 300 HLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPHIVGAEHYAIARGVQKVLQNYKSLQDI 359

Query: 390 RLIGG 394
             I G
Sbjct: 360 IAILG 364


>gi|71370888|gb|AAZ30673.1| ATP synthase beta subunit [Microciona prolifera]
          Length = 427

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 159/307 (51%), Gaps = 21/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +G+ ++   I +  P  ++    ++   TGI+V+D+  P   G 
Sbjct: 65  GRIINVIGEPIDERGPIGE-EMQAAIHADAPEFVDMNVKQEILVTGIKVVDLLAPYAKGG 123

Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209
           +IG+F G+G+GK+ ++         A   C    + + VGER RE  +   +        
Sbjct: 124 KIGLFGGAGVGKTVVIMELINNVAKAHGGC---SVFAGVGERTREGNDLYHEMIQGGVIS 180

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 181 LKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSE 240

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P+      ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 241 VSALLGRIPLLWATSQTLATDMGTMQERI--TTTQKGSITSVQAVFVPADDLTDPAPATT 298

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R+++E G YP VDPL S SR+ D     A+   +   +  ++  +   +
Sbjct: 299 FAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNIVGAEHYNVARGVQKILQDYRSLQ 358

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 359 DIIAILG 365


>gi|66048345|ref|YP_238186.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
           B728a]
 gi|237801681|ref|ZP_04590142.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|257485616|ref|ZP_05639657.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289649121|ref|ZP_06480464.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|289677529|ref|ZP_06498419.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
           FF5]
 gi|298489521|ref|ZP_07007530.1| ATP synthase beta chain [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|302185823|ref|ZP_07262496.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
           642]
 gi|75499956|sp|Q4ZL24|ATPB_PSEU2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|63259052|gb|AAY40148.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. syringae
           B728a]
 gi|298155948|gb|EFH97059.1| ATP synthase beta chain [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|320321670|gb|EFW77769.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331127|gb|EFW87098.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330881925|gb|EGH16074.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330952352|gb|EGH52612.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae Cit 7]
 gi|330961486|gb|EGH61746.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. maculicola
           str. ES4326]
 gi|330976386|gb|EGH76443.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|330987002|gb|EGH85105.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331011905|gb|EGH91961.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331024540|gb|EGI04596.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 459

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID       G ++ E    I    P    +       +TGI+VID+ 
Sbjct: 82  ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++ 
Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI 
Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374

Query: 391 LIGG 394
            I G
Sbjct: 375 AILG 378


>gi|315497308|ref|YP_004086112.1| ATP synthase f1, beta subunit [Asticcacaulis excentricus CB 48]
 gi|315415320|gb|ADU11961.1| ATP synthase F1, beta subunit [Asticcacaulis excentricus CB 48]
          Length = 481

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +     +  I +  P   ++    +   TGI+VID+  P  
Sbjct: 92  ATLGRIMNVIGEPIDEAGPIETTYFN-PIHADAPAFEDQATSAEILVTGIKVIDLICPYA 150

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE---- 207
            G +IG+F G+G+GK+     L++  A++     V    VGER RE      E IE    
Sbjct: 151 KGGKIGLFGGAGVGKTVTIQELINNIAKAYGGYSVFAG-VGERTREGNDLYHEMIESKVN 209

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
           ++ G    +  +V    +E P  R    LT +  AEYF   +G +VL  +D+I RF  + 
Sbjct: 210 EHGGGGNSRCTLVYGQMNEPPGARARVALTGLAQAEYFRDQEGKDVLFFVDNIFRFTQAG 269

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT+V +V V  D+  DP   
Sbjct: 270 SEVSALLGRIPSAVGYQPTLATEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPA 327

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEE 385
           +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V++ +  ++ +++ 
Sbjct: 328 TSFAHLDATTVLSRSIAEQGIYPAVDPLDSTSRILDPRIVGEEHYQVATRVQEILQQYKA 387

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 388 LKDIIAILG 396


>gi|156095717|ref|XP_001613893.1| ATP synthase beta chain, mitochondrial precursor [Plasmodium vivax
           SaI-1]
 gi|148802767|gb|EDL44166.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Plasmodium vivax]
          Length = 547

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 162/316 (51%), Gaps = 31/316 (9%)

Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLC 159
           GR++N +G+PID  GD    K    M  + + PP    Q  E     TGI+V+D+  P  
Sbjct: 153 GRIMNVIGEPIDECGDIKCTK----MLPIHREPPLFTDQSTEPALLITGIKVVDLIAPYA 208

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGD--- 212
            G +IG+F G+G+GK T+L M   ++   K     + + VGER RE  +   + +     
Sbjct: 209 KGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMITTGVI 267

Query: 213 ------------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
                       N  K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+I
Sbjct: 268 KKKKIGNGQYDFNGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFVDNI 327

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+
Sbjct: 328 YRFTQAGSEVSALLGRIPSAVGYQPTLSTDLGALQERI--TTTKNGSITSVQAVYVPADD 385

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
             DP   +  S LD   VL+RS+AE G YP VDPL S SR L      A++ ++  ++  
Sbjct: 386 LTDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGAEQYEVARNVQQ 445

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 446 ILQDYKSLQDIIAILG 461


>gi|160895869|ref|YP_001561451.1| F0F1 ATP synthase subunit beta [Delftia acidovorans SPH-1]
 gi|226740187|sp|A9BPU7|ATPB_DELAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160361453|gb|ABX33066.1| ATP synthase F1, beta subunit [Delftia acidovorans SPH-1]
          Length = 469

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 19/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    + +  L+  I  K P        ++  +TGI+VID+ +P  
Sbjct: 83  ATLGRIMDVLGNPIDERGPVDQA-LTAPIHRKAPAYDELSPSQELLETGIKVIDLISPFA 141

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD--- 212
            G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  + + D   
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELINNIAKGHGGLSVFAG-VGERTREGNDFYHE-MSDAGV 199

Query: 213 ------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                 N  K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  + 
Sbjct: 200 VNQESLNDSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAG 259

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 260 TEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPA 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD  +VL+R +A  G YP VDPL S SR  D     +E  K+   +   + R++E
Sbjct: 318 TTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYKVAREVQGTLQRYKE 377

Query: 386 TRDIRLIGG 394
            RDI  I G
Sbjct: 378 LRDIIAILG 386


>gi|313894311|ref|ZP_07827876.1| ATP synthase F1, beta subunit [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441135|gb|EFR59562.1| ATP synthase F1, beta subunit [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 474

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRIFNVLGETVDHDPAPVAADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     +E  ++   +  ++ ++++ +DI  I G
Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYEVARGVQEVLQKYKDLQDIIAILG 388


>gi|264676472|ref|YP_003276378.1| ATP synthase F1 subunit beta [Comamonas testosteroni CNB-2]
 gi|299531206|ref|ZP_07044617.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44]
 gi|262206984|gb|ACY31082.1| ATP synthase F1, beta subunit [Comamonas testosteroni CNB-2]
 gi|298720789|gb|EFI61735.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44]
          Length = 469

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 22/342 (6%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G +V + G     P      GR+++ LG PID    + +  L+  
Sbjct: 51  VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQ-TLTAA 109

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169

Query: 184 SDCFDKVIISLVGERGREVREFI----------EDYLGDNLKKSVVVVATSDESPILRKM 233
           +     V    VGER RE  +F           ++ LG++  K  +V    +E P  R  
Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMSDAGVVNQENLGES--KVAMVYGQMNEPPGNRLR 226

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
             LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ +L
Sbjct: 227 VALTGLTMAESFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKL 286

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 287 QERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDP 344

Query: 354 LASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L S SR  D     +E  K+   +   + R++E RDI  I G
Sbjct: 345 LDSTSRQLDPQVVGEEHYKVARQVQGTLQRYKELRDIIAILG 386


>gi|261187936|ref|XP_002620385.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis SLH14081]
 gi|239593396|gb|EEQ75977.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis SLH14081]
 gi|239614983|gb|EEQ91970.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis ER-3]
 gi|327357191|gb|EGE86048.1| ATP synthase subunit beta [Ajellomyces dermatitidis ATCC 18188]
          Length = 522

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVTGDPIDERGPI-KGTKMAPIHAEAPAYVEQATSAEILVTGIKVVDLLAPYARG 192

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 193 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 251

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 252 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 311

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 312 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 369

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     DE   V++ +  ++  ++  +DI
Sbjct: 370 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDEHYAVATRVQQMLQEYKSLQDI 429

Query: 390 RLIGG 394
             I G
Sbjct: 430 IAILG 434


>gi|166362833|ref|YP_001655106.1| F0F1 ATP synthase subunit beta [Microcystis aeruginosa NIES-843]
 gi|190358681|sp|B0JFM7|ATPB_MICAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166085206|dbj|BAF99913.1| ATP synthase beta subunit [Microcystis aeruginosa NIES-843]
          Length = 482

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 166/324 (51%), Gaps = 18/324 (5%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+V       +    C  GR+ N LG+P+D    +   + S  I    P  ++ +     
Sbjct: 79  DIVDTGAAISVPVGKCTLGRIFNVLGEPVDEKGPVNVTETS-PIHRPAPKLVDLEVTPTV 137

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE 201
           F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +S+ G   ER RE
Sbjct: 138 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 197

Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDN 251
                 E IE  +   DN + S   +V    +E P  R    L+A+T+AEYF   SK D 
Sbjct: 198 GNDLYNEMIESKVINADNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVSKQD- 256

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ 
Sbjct: 257 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQ 314

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +       DE  
Sbjct: 315 AVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQADIVGDEHY 374

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
               ++   + R++E +DI  I G
Sbjct: 375 GTARAVQSTLQRYKELQDIIAILG 398


>gi|29829423|ref|NP_824057.1| F0F1 ATP synthase subunit beta [Streptomyces avermitilis MA-4680]
 gi|81838405|sp|Q82J84|ATPB_STRAW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|29606530|dbj|BAC70592.1| putative F-type proton-transporting ATPase beta chain [Streptomyces
           avermitilis MA-4680]
          Length = 478

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 176/328 (53%), Gaps = 19/328 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D+       S  I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNVDEKYDGERWS--IHRKAPRFDELESKTEMFETGVKVIDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+ + D+  + K+
Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MSDSGVIDKT 217

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +
Sbjct: 218 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 277

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 278 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 335

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R ++E+G YP VDPL S SR+ D  + A D       +  ++ ++++ +DI  I   
Sbjct: 336 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYDAAMRVKTVLQKYKDLQDIIAI--- 392

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420
             G+D + ++    VH+   +  FL Q+
Sbjct: 393 -LGIDELGEEDKLVVHRARRVERFLSQN 419


>gi|74198645|dbj|BAE39797.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|282896620|ref|ZP_06304635.1| ATP synthase F1, beta subunit [Raphidiopsis brookii D9]
 gi|281198490|gb|EFA73376.1| ATP synthase F1, beta subunit [Raphidiopsis brookii D9]
          Length = 482

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I  + P   + +     F+TGI+V+D+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDNQGPVNNEE-TLPIHRESPKLTDLETKPSVFETGIKVVDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  +  
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +NL +S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 KENLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +   +    E   +  S+   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPSIVGKEHYDIARSVQATLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|71370926|gb|AAZ30692.1| ATP synthase beta subunit [Nereis vexillosa]
          Length = 388

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +     +  I ++ P  +     ++  +TGI+V+D+  P   G
Sbjct: 64  LGRIINVIGEPIDERGPV-NARTTAPIHAEAPEFVEMSVEQEILETGIKVVDLLAPYAKG 122

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 181

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
            D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 182 KDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D     A+   +   +  ++  ++  +D
Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGAEHYGVARGVQKILQDYKSLQD 359

Query: 389 IRLIGG 394
           I  I G
Sbjct: 360 IIAILG 365


>gi|330447620|ref|ZP_08311268.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491811|dbj|GAA05765.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 461

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG PID    +G+      I    P   ++    +  +TG++VID+  P   G 
Sbjct: 87  GRIMNVLGTPIDECGEIGEKK-KYAIHRAAPSYEDQSNSSELLETGVKVIDLICPFAKGG 145

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K 
Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 205 SMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +V
Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++A  G YP +DPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQTVLQRYKELKDIIAILG 380


>gi|256390420|ref|YP_003111984.1| ATP synthase F1 subunit beta [Catenulispora acidiphila DSM 44928]
 gi|256356646|gb|ACU70143.1| ATP synthase F1, beta subunit [Catenulispora acidiphila DSM 44928]
          Length = 479

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 148/256 (57%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGRE 201
           F TGI+V+D+ TP  +G +IG+F G+G+GK+ L+   ++  +  F  V + + VGER RE
Sbjct: 142 FTTGIKVVDLLTPYVNGGKIGLFGGAGVGKTVLIQELIYRVAANFGGVSVFAGVGERTRE 201

Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +    D +KK+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I
Sbjct: 202 GNDLIAEMTETDVIKKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNI 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI  ++    +IT+V ++ V  D+
Sbjct: 262 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTKGH--SITSVQAIYVPADD 319

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTH 378
             DP   +  + LD   VL+R + ++G YP VDPL S SR+ D  + S +  +  + +  
Sbjct: 320 ITDPAPHTTFTHLDATTVLSRPITQKGIYPAVDPLDSTSRILDPRYISREHYECATRIKA 379

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 380 ILQKYKDLQDIIAILG 395


>gi|213401052|gb|ACJ47174.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of
           Zootermopsis angusticollis]
 gi|213401054|gb|ACJ47175.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of
           Zootermopsis nevadensis]
          Length = 311

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 146/272 (53%), Gaps = 20/272 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG   +E + + PP+   QR+ E+    GI+VID+  P   G
Sbjct: 20  GRIFNVVGELIDECGPL-KGKCDLEPIHREPPSFTEQRIQEEVLVMGIKVIDLLAPYLKG 78

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 79  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 136

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF  K   +VL  +D+I RF  +  
Sbjct: 137 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDKENQDVLFFVDNIFRFTQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 197 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             S LD   VL+R +AE G YP VDPL S S+
Sbjct: 255 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQ 286


>gi|325921269|ref|ZP_08183129.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325548236|gb|EGD19230.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 468

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|21956140|dbj|BAC06431.1| ATP synthase beta-subunit [Gonium multicoccum]
          Length = 376

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVES 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            LGD+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 QLGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|311743983|ref|ZP_07717789.1| ATP synthase F1 sector beta subunit [Aeromicrobium marinum DSM
           15272]
 gi|311313113|gb|EFQ83024.1| ATP synthase F1 sector beta subunit [Aeromicrobium marinum DSM
           15272]
          Length = 484

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 8/273 (2%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184
           I +K P     +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+  M AR   
Sbjct: 129 IHAKAPAFDQLESKTEMFQTGIKVIDLLTPYVLGGKIGLFGGAGVGKTVLIQEMIARVAR 188

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D     + + VGER RE  + I E      L ++ +V    DE P  R    L+A+T+AE
Sbjct: 189 DHGGVSVFAGVGERTREGNDLIAEMEEAGVLGQTALVFGQMDEPPGARLRVALSALTMAE 248

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 249 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTRG 308

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    LNR +A  G YP VDPL S SR+ D
Sbjct: 309 H--SITSLQAIYVPADDYTDPAPATTFAHLDATTELNREIASMGIYPAVDPLTSTSRILD 366

Query: 363 KAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             + S D     + +  ++ R +E +DI  I G
Sbjct: 367 PRYISHDHYTTANRVKSILQRNKELQDIIAILG 399


>gi|218197235|gb|EEC79662.1| hypothetical protein OsI_20905 [Oryza sativa Indica Group]
          Length = 538

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 163/306 (53%), Gaps = 27/306 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+  P 
Sbjct: 149 GRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPY 203

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED-- 208
             G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE   
Sbjct: 204 QRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGV 262

Query: 209 -YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
             LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  
Sbjct: 263 IKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQ 322

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP 
Sbjct: 323 ANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPA 380

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++  +
Sbjct: 381 PATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNY 440

Query: 384 EETRDI 389
           +  +DI
Sbjct: 441 KNLQDI 446


>gi|303319229|ref|XP_003069614.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|111606563|gb|ABH10645.1| ATP synthase beta chain [Coccidioides posadasii]
 gi|240109300|gb|EER27469.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320040970|gb|EFW22903.1| ATP synthase subunit beta [Coccidioides posadasii str. Silveira]
          Length = 521

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGVMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 367

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     DE  ++ + +  +I  ++  +DI
Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDEHYQVATRVQQMIQEYKSLQDI 427

Query: 390 RLIGG 394
             I G
Sbjct: 428 IAILG 432


>gi|313760420|dbj|BAJ41240.1| ATP synthase beta subunit [Mesocricetus auratus]
          Length = 529

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|158338428|ref|YP_001519605.1| F0F1 ATP synthase subunit beta [Acaryochloris marina MBIC11017]
 gi|158308669|gb|ABW30286.1| ATP synthase F1, beta subunit [Acaryochloris marina MBIC11017]
          Length = 484

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +G  D +  I    P   + +     F+TGI+VID+ TP  
Sbjct: 94  ATLGRIFNVLGEPVDNQGDVGT-DETFPIHRPAPKLTDLETKPSVFETGIKVIDLLTPYR 152

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYL------ 210
            G +IG+F G+G+GK+ ++        ++     +   VGER RE  +   + +      
Sbjct: 153 RGGKIGLFGGAGVGKTVIMMELINNIATNHGGVSVFGGVGERTREGNDLYNEMMESGVIN 212

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL  S + +     +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  
Sbjct: 213 KDNLNDSKIALCYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 272

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 273 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 330

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +      +DE  +   ++   + R++E 
Sbjct: 331 TFAHLDGTTVLSRGLASKGIYPAVDPLDSASTMLQPGIVSDEHYETARAVQSTLQRYKEL 390

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 391 QDIIAILG 398


>gi|109066521|ref|XP_001091520.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Macaca
           mulatta]
          Length = 529

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P D    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPFDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLTTDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|62318463|dbj|BAD94439.1| beta subunit of F1F0-ATP synthase [Acidithiobacillus ferrooxidans]
          Length = 468

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR++N LG+P+DG   +   D   + + +  PA +      +  +TGI+VID+  P   G
Sbjct: 91  GRIMNVLGEPVDGKGPVQTQD--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +    S+   VGER RE  +F  +      L K 
Sbjct: 149 GKVGLFGGAGVGKTVFMMEMIRNIAIEHTGYSVCAGVGERTREGNDFYHEMTDSGVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R  A LT +T+A  F  +G ++L+ +D+I R+  +  E++   G +P
Sbjct: 209 ALVNGQMNEPPRNRLRAGLTGLTMAASFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D   DP   +  + LD  +V
Sbjct: 269 SAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADYLTDPSPATTFAHLDATVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP +DPL S SR  D      E   V+ S    +  ++E +DI  I G
Sbjct: 327 LSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQPYKELQDIIAILG 384


>gi|1374715|gb|AAB02288.1| ATP synthase beta subunit [Rattus norvegicus]
          Length = 475

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 87  LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 204

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 205 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 323 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|584797|sp|P37399|ATPBM_DAUCA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|18322|emb|CAA42844.1| ATP synthase b subunit [Daucus carota]
          Length = 547

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 13/302 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    + K D  + I  + P  +++   ++   TGI+V+D+  P   G 
Sbjct: 162 GRIINVIGEPIDHRGEI-KTDQYLPIHREAPTFVDQATEQQILVTGIKVVDLLAPYQKGG 220

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLK 215
           +IG+F G  +GK+ L+     +      + + VGER RE     +E +E     LGD   
Sbjct: 221 KIGLFGGDWVGKTVLIMELINNVAKAHAVFAGVGERTREGNDLYKEMMESGVIKLGDQQA 280

Query: 216 KS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           +S   +V    +E P  R    LT +T+AE+F  ++G++VLL +D   RF  +  E++  
Sbjct: 281 ESKCALVYGQMNEPPGSRARVGLTGLTVAEHFRDAEGEDVLLFVDKRFRFTQANSEVSAL 340

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + L
Sbjct: 341 LGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 398

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           D   VL+R ++E G YP VDPL S SR+       +       +  ++  ++  +DI  I
Sbjct: 399 DATTVLSRQISELGIYPAVDPLDSTSRMLTPESGEEHYNTARGVQKVLQNYKNLQDIIAI 458

Query: 393 GG 394
            G
Sbjct: 459 LG 460


>gi|163784733|ref|ZP_02179542.1| hypothetical protein HG1285_01231 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879998|gb|EDP73693.1| hypothetical protein HG1285_01231 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 477

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 11/311 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G  +I       GR+ N +G+PID D    + +    I    P    +    + F+TGI+
Sbjct: 85  GPLQIPVGKAVLGRIFNVVGQPID-DAGPVEAEEKWPIFRPAPSFEEQSTKVEIFETGIK 143

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-F 205
           VID+  P   G ++G+F G+G+GK+ L+       A+      V++  VGER RE  + +
Sbjct: 144 VIDLLVPFIKGGKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLW 202

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +E      L  + +V    +E P +R     T +T+AEYF   +  +VL+ +D+I RF  
Sbjct: 203 MEMKESGVLPYTAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++T  G LP A GY  ++ +++  + ERI  +    G+IT++ +V V  D+  DP 
Sbjct: 263 AGAEVSTLLGRLPSAVGYQPTLGTDVGEVQERIASTVN--GSITSIQAVYVPADDITDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             S+ + LD  IVL R LAE G YP +DPL S S+     +  +E   V+  +  ++ R+
Sbjct: 321 PASIFAHLDATIVLQRRLAELGIYPAIDPLESTSKALAPEYVGEEHYYVAREVQRILQRY 380

Query: 384 EETRDIRLIGG 394
           +E ++I  I G
Sbjct: 381 KELQEIIAILG 391


>gi|23503597|dbj|BAC20395.1| ATP synthase beta-subunit [Chloromonas macrostellata]
 gi|23503609|dbj|BAC20401.1| ATP synthase beta-subunit [Chloromonas rosae]
          Length = 376

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K D ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKADTALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|166713524|ref|ZP_02244731.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 468

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRSAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|119350463|gb|ABL63182.1| AtpB [Carteria obtusa]
          Length = 392

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    +  + I  K P  ++       F+TGI+V+D+  P  
Sbjct: 38  LGRIFNVLGEPVD---NLGPVNAEEKLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYR 94

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 95  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 154

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 155 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 212

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+ +DP  
Sbjct: 213 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLSDPAP 270

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R+
Sbjct: 271 STTFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSARSVKKTLQRY 329

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 330 KELQDIIAILG 340


>gi|21230029|ref|NP_635946.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66769977|ref|YP_244739.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|81304070|sp|Q4UQF4|ATPB_XANC8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81860399|sp|Q8PCZ5|ATPB_XANCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21111549|gb|AAM39870.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575309|gb|AAY50719.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 468

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|329118580|ref|ZP_08247284.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465315|gb|EGF11596.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 465

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LGKP+D   ++     +  I  + P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGKPVDEAGAV-DSKHTRSIHQEAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|289628231|ref|ZP_06461185.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|330870058|gb|EGH04767.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 459

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID       G ++ E    I    P    +       +TGI+VID+ 
Sbjct: 82  ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++ 
Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI 
Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374

Query: 391 LIGG 394
            I G
Sbjct: 375 AILG 378


>gi|28872698|ref|NP_795317.1| ATP synthase F1 subunit beta [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213968459|ref|ZP_03396602.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1]
 gi|301384254|ref|ZP_07232672.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063895|ref|ZP_07255436.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
           K40]
 gi|302131979|ref|ZP_07257969.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|81728859|sp|Q87TT4|ATPB_PSESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28855954|gb|AAO59012.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213926747|gb|EEB60299.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1]
 gi|330876336|gb|EGH10485.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964198|gb|EGH64458.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|331017744|gb|EGH97800.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 459

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID       G ++ E    I    P    +       +TGI+VID+ 
Sbjct: 82  ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++ 
Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI 
Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374

Query: 391 LIGG 394
            I G
Sbjct: 375 AILG 378


>gi|323144391|ref|ZP_08078999.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066]
 gi|322415844|gb|EFY06570.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066]
          Length = 472

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    + + +  + I  + P    +    +  +TGI+VID+  P   G 
Sbjct: 98  GRIMNVLGQPVDEAGPINEKERWV-IHREAPTYAEQSSTTEVLETGIKVIDLICPFAKGG 156

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKS 217
           ++G+F G+G+GK+     L++  A +     V    VGER RE  +F  +      + K 
Sbjct: 157 KVGLFGGAGVGKTVNMMELINNIATAHSGLSVFTG-VGERTREGNDFYHEMQEAKVIDKV 215

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            ++    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 216 SMIYGQMNEPPGNRLRVALTGLTVAEKFRDEGLDVLLFIDNIYRYTLAGTEVSALLGRMP 275

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD  IV
Sbjct: 276 SAVGYQPTLAEEMGVLQERI--ASTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATIV 333

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D +    D  ++   +  ++ R++E +DI  I G
Sbjct: 334 LSRQIASLGIYPAVDPLDSTSRQLDPSIVGKDHYEVARGVQTVLQRYKELKDIIAILG 391


>gi|118498208|ref|YP_899258.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           novicida U112]
 gi|194324392|ref|ZP_03058165.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208780235|ref|ZP_03247577.1| ATP synthase F1, beta subunit [Francisella novicida FTG]
 gi|254373552|ref|ZP_04989039.1| ATP synthase subunit B [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|166201705|sp|A0Q8D9|ATPB_FRATN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118424114|gb|ABK90504.1| ATP synthase, F1 sector, subunit beta [Francisella novicida U112]
 gi|151571277|gb|EDN36931.1| ATP synthase subunit B [Francisella novicida GA99-3549]
 gi|194321457|gb|EDX18942.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208743884|gb|EDZ90186.1| ATP synthase F1, beta subunit [Francisella novicida FTG]
 gi|332678943|gb|AEE88072.1| ATP synthase beta chain [Francisella cf. novicida Fx1]
          Length = 458

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N LG+PID    +   +     + + PPA +   +     +TGI+V+D+  P   
Sbjct: 83  LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L 
Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    L+ +TIAE F  +  +VL+ +D+I R+  +  E++   G 
Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  
Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           IVL+R +AE G YP VDPL S SR  D      E  +   ++  ++ R++E +DI  I G
Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYETARAVQKVLQRYKELKDIIAILG 377


>gi|4519312|dbj|BAA75571.1| ATP synthase beta-subunit [Gonium octonarium]
          Length = 376

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVTFSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVER 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            LGD+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 QLGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|307594193|ref|YP_003900510.1| H(+)-transporting two-sector ATPase [Vulcanisaeta distributa DSM
           14429]
 gi|307549394|gb|ADN49459.1| H(+)-transporting two-sector ATPase [Vulcanisaeta distributa DSM
           14429]
          Length = 476

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 168/320 (52%), Gaps = 16/320 (5%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V  +GR  R+  S    GRV++  G+P DG   L   +  ++I  +      R+  E
Sbjct: 76  GSTVRFYGRTLRLPVSEDLLGRVLDGKGQPRDGL-PLPPAEEYLDINGEPLNPYAREYPE 134

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196
           +  +TG+ VID    +  GQ++ +F+G+G+  + L +  AR            +I + +G
Sbjct: 135 EPIETGVSVIDGLNTMVRGQKLPIFSGTGLPHNMLAAQVARQATVRGHEEEFAIIFAAMG 194

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLL 254
            +  E   F+ ++      + +V+V      PI  R + P TA+TIAEY +   D +VL+
Sbjct: 195 LKSEEALFFLNEFRRTGALRRLVMVLNLASDPIAERILTPRTALTIAEYLAWYRDYHVLV 254

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  +T +A ++RE++++ GELP  RGYP  ++++   + ER G ++ +KG+IT    + 
Sbjct: 255 ILTDMTNYAEALRELSSSKGELPGRRGYPGYMYTDFATIYERTGRAKGKKGSITQFPILT 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA----WSADEK 370
           +  D+   PI D    I +G +VL+R+L  +G YPP D + S+SRL   A     + D+ 
Sbjct: 315 MPHDDITHPIPDLTGYITEGQLVLSRTLWGKGIYPPFDVIMSLSRLMKDAVGEGKTRDDH 374

Query: 371 KLVSSLTHLIHRFEETRDIR 390
           K V++   LI  +    D+R
Sbjct: 375 KYVAN--QLIAAYSRALDVR 392


>gi|18415911|ref|NP_568204.1| ATP synthase beta chain 2, mitochondrial [Arabidopsis thaliana]
 gi|26391492|sp|P83484|ATPBN_ARATH RecName: Full=ATP synthase subunit beta-2, mitochondrial; Flags:
           Precursor
 gi|13548327|emb|CAC35874.1| H+-transporting ATP synthase beta chain (mitochondrial)-like
           protein [Arabidopsis thaliana]
 gi|15293123|gb|AAK93672.1| unknown protein [Arabidopsis thaliana]
 gi|19310683|gb|AAL85072.1| unknown protein [Arabidopsis thaliana]
 gi|21281109|gb|AAM44896.1| unknown protein [Arabidopsis thaliana]
 gi|26452188|dbj|BAC43182.1| putative H+-transporting ATP synthase beta chain (mitochondrial)
           [Arabidopsis thaliana]
 gi|332003955|gb|AED91338.1| ATP synthase subunit beta-2 [Arabidopsis thaliana]
          Length = 556

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 18/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    + K +  + I    P  ++    ++   TGI+V+D+  P  
Sbjct: 164 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 223 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 281

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +
Sbjct: 282 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 341

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ S+L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 342 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 399

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 400 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 434


>gi|325915883|ref|ZP_08178179.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537850|gb|EGD09550.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 468

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRTAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      +       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGTEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|225572597|gb|ACN93884.1| AtpD [Gallibacterium anatis]
          Length = 452

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+      I    P    +    +  +T I+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETDIKVIDLVCPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPPPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|288961601|ref|YP_003451911.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510]
 gi|288913881|dbj|BAI75367.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510]
          Length = 487

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+I+ +G   D    L  G     I    PP   R       +TGI+VID+  PL  G 
Sbjct: 108 GRLIDVMGSARDDGPELPDGTPRAPIHRAPPPLARRSPRRDPMETGIKVIDLLAPLARGG 167

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           +  +F G+G+GK+ L+    R        IS+   +GER RE +E  E+      L ++ 
Sbjct: 168 KAAMFGGAGVGKTVLVMELIRKMVERHSGISVFAGIGERSREGQELWEEMKRSGVLDRTA 227

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LTA+TIAE+F  +   +VLL++D++ RF  +  E++   G LP
Sbjct: 228 LVFGQMNEPPGARWRVGLTALTIAEHFRDEARRDVLLLMDNVFRFVQAGAEVSGLLGRLP 287

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ SE+  L ER+  +      +TA+ +V V  D+  DP    + S LD  IV
Sbjct: 288 SRVGYQPTLASEIAELEERV--ASTAGAVVTAIQAVYVPADDFTDPAVAELFSHLDSSIV 345

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R++A EG YP VDPL+S S L D     +   +L   +   I  + E +D+
Sbjct: 346 LSRAMAAEGLYPAVDPLSSTSSLLDPLVVGEAHYRLAEEVRGTIAHYRELQDV 398


>gi|83649673|ref|YP_438108.1| F0F1 ATP synthase subunit beta [Hahella chejuensis KCTC 2396]
 gi|118573541|sp|Q2S6P1|ATPB_HAHCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|83637716|gb|ABC33683.1| ATP synthase F1, beta subunit [Hahella chejuensis KCTC 2396]
          Length = 459

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +  M I    P   ++       +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEKGPIGEEE-RMPIHRTAPGYADQSSSRDLLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +      L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMEESKVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  +
Sbjct: 261 PSAVGYQPTLAEEMGVLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFSHLDATV 318

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +A +G YP +DPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 VLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 377


>gi|17939849|emb|CAC81058.1| mitochondrial F1 ATP synthase beta subunit [Arabidopsis thaliana]
          Length = 589

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 148/271 (54%), Gaps = 16/271 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    + K +  + I    P  ++    ++   TGI+V+D+  P   G 
Sbjct: 200 GRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGG 258

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE     LG+
Sbjct: 259 KIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGE 318

Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
              +S   +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +  E+
Sbjct: 319 KQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEV 378

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ S+L  L ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 379 SALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 436

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 437 AHLDATTVLSRQISELGIYPAVDPLDSTSRM 467


>gi|91777092|ref|YP_546848.1| F0F1 ATP synthase subunit beta [Methylobacillus flagellatus KT]
 gi|118573696|sp|Q1GXN0|ATPB_METFK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91711079|gb|ABE51007.1| ATP synthase F1, beta subunit [Methylobacillus flagellatus KT]
          Length = 465

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 168/333 (50%), Gaps = 11/333 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +S G  V + G + ++       GR+++ LG+PID    + + D    
Sbjct: 55  VVRTIAMGSSDGLSRGMKVKNTGSQIQVPVGHGTLGRIMDVLGRPIDEAGPI-EADEKRS 113

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P            +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 114 IHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 173

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
                 V    VGER RE  +F  +    N L K  +V    +E P  R    LT +T+A
Sbjct: 174 QHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMA 232

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  
Sbjct: 233 ERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TST 290

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 291 KVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLD 350

Query: 363 KAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
                +E   V+ ++   + R++E RDI  I G
Sbjct: 351 PQIVGEEHYSVARAVQSTLQRYKELRDIIAILG 383


>gi|28198344|ref|NP_778658.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa Temecula1]
 gi|71901248|ref|ZP_00683348.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|182680985|ref|YP_001829145.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M23]
 gi|81839548|sp|Q87E90|ATPB_XYLFT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740693|sp|B2I877|ATPB_XYLF2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28056414|gb|AAO28307.1| ATP synthase beta chain [Xylella fastidiosa Temecula1]
 gi|71728981|gb|EAO31112.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|182631095|gb|ACB91871.1| ATP synthase F1, beta subunit [Xylella fastidiosa M23]
 gi|307579453|gb|ADN63422.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 466

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +   D   EI    P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEAGPITYTD-QWEIHRNAPSYEDQASTTELLETGIKVIDLMCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +    G+IT++ +V V  D+  DP   +   
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSITSIQAVYVPADDLTDPSPATTFG 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  + L+RS+A  G YP VDPL S SR  D     +E       +   + ++++ +DI
Sbjct: 319 HLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKYKDLKDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|291389459|ref|XP_002711130.1| PREDICTED: mitochondrial ATP synthase beta subunit [Oryctolagus
           cuniculus]
          Length = 528

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|89574027|gb|ABD77239.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Tadarida brasiliensis]
          Length = 429

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 77  LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 135

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372

Query: 389 IRLIGG 394
           I  I G
Sbjct: 373 IIAILG 378


>gi|91178106|gb|ABE27288.1| mitochondrial F-ATPase beta subunit [Candida dubliniensis]
          Length = 337

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 20/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G 
Sbjct: 20  GRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    +  
Sbjct: 79  KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  +D
Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQD 313

Query: 389 IRLIGG 394
           I  I G
Sbjct: 314 IIAILG 319


>gi|110680693|ref|YP_683700.1| F0F1 ATP synthase subunit beta [Roseobacter denitrificans OCh 114]
 gi|118573740|sp|Q162S9|ATPB_ROSDO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|109456809|gb|ABG33014.1| ATP synthase F1, beta subunit [Roseobacter denitrificans OCh 114]
          Length = 474

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   I       GR++N +G+PID    +   D +  I  + P    +    +  +TGI+
Sbjct: 75  GPISIPVGNATLGRIMNVVGEPIDEKGPVAT-DETRSIHQEAPAFAEQSTSSEVLETGIK 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201
           VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE    
Sbjct: 134 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDL 191

Query: 202 VREFIED--YLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
             E IE    + DNL +S V  V    +E P  R    LT +T+AE F  + G +VL  +
Sbjct: 192 YHEMIESSVIVPDNLTESKVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFV 251

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V 
Sbjct: 252 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKAGSITSVQAVYVP 309

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D     +E   V+  
Sbjct: 310 ADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPQVLGEEHYNVARD 369

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ R++  +DI  I G
Sbjct: 370 VQGILQRYKSLQDIIAILG 388


>gi|254382328|ref|ZP_04997688.1| ATP synthase subunit B [Streptomyces sp. Mg1]
 gi|194341233|gb|EDX22199.1| ATP synthase subunit B [Streptomyces sp. Mg1]
          Length = 480

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 175/328 (53%), Gaps = 17/328 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  +          I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNYPEENANVTERWPIHRKAPRFDELESKTEMFETGVKVIDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+ + D+  + K+
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MADSGVIDKT 219

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I R+  +  E++T  G +
Sbjct: 220 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRYTQAGSEVSTLLGRM 279

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 280 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 337

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R ++E+G YP VDPL S SR+ D  + +AD       +  ++ ++++ +DI  I   
Sbjct: 338 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYATAMRVKGILQKYKDLQDIIAI--- 394

Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420
             G+D + ++    VH+   +  FL Q+
Sbjct: 395 -LGIDELGEEDKLVVHRARRVERFLSQN 421


>gi|330970308|gb|EGH70374.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 443

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID       G ++ E    I    P    +       +TGI+VID+ 
Sbjct: 82  ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++ 
Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI 
Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374

Query: 391 LIGG 394
            I G
Sbjct: 375 AILG 378


>gi|15837745|ref|NP_298433.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa 9a5c]
 gi|81623765|sp|Q9PE85|ATPB_XYLFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|9106107|gb|AAF83953.1|AE003950_3 ATP synthase, beta chain [Xylella fastidiosa 9a5c]
          Length = 466

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +   D   EI    P   ++    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEAGPITYTD-QWEIHRNAPSYEDQASTTELLETGIKVIDLMCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +    G+IT++ +V V  D+  DP   +   
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSITSIQAVYVPADDLTDPSPATTFG 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  + L+RS+A  G YP VDPL S SR  D     +E       +   + ++++ +DI
Sbjct: 319 HLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKYKDLKDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|126176547|ref|YP_001052696.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS155]
 gi|153002861|ref|YP_001368542.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS185]
 gi|160877608|ref|YP_001556924.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS195]
 gi|217975448|ref|YP_002360199.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS223]
 gi|304412687|ref|ZP_07394290.1| ATP synthase F1, beta subunit [Shewanella baltica OS183]
 gi|307305848|ref|ZP_07585594.1| ATP synthase F1, beta subunit [Shewanella baltica BA175]
 gi|166222413|sp|A3DAR4|ATPB_SHEB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222414|sp|A6WUJ0|ATPB_SHEB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081344|sp|A9KX06|ATPB_SHEB9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808163|sp|B8EDV0|ATPB_SHEB2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|125999752|gb|ABN63827.1| ATP synthase F1, beta subunit [Shewanella baltica OS155]
 gi|151367479|gb|ABS10479.1| ATP synthase F1, beta subunit [Shewanella baltica OS185]
 gi|160863130|gb|ABX51664.1| ATP synthase F1, beta subunit [Shewanella baltica OS195]
 gi|217500583|gb|ACK48776.1| ATP synthase F1, beta subunit [Shewanella baltica OS223]
 gi|304348897|gb|EFM13312.1| ATP synthase F1, beta subunit [Shewanella baltica OS183]
 gi|306911341|gb|EFN41767.1| ATP synthase F1, beta subunit [Shewanella baltica BA175]
 gi|315269806|gb|ADT96659.1| ATP synthase F1, beta subunit [Shewanella baltica OS678]
          Length = 463

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 10/301 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    +G+ +  + I    P   ++    +  +TGI+VID+  P  
Sbjct: 85  ATLGRIMNVLGEPIDEAGPIGEEERYV-IHRTAPSYEDQSSSTELLETGIKVIDLVCPFA 143

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +      L
Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R    L+ +T+AE F  +G +VLL +D+I R+  +  E++   G
Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP VDPL S SR  D      E   + + +  ++ R++E +DI  I 
Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380

Query: 394 G 394
           G
Sbjct: 381 G 381


>gi|297806945|ref|XP_002871356.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata]
 gi|297810985|ref|XP_002873376.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata]
 gi|26391487|sp|P83483|ATPBM_ARATH RecName: Full=ATP synthase subunit beta-1, mitochondrial; Flags:
           Precursor
 gi|13548325|emb|CAC35872.1| H+-transporting ATP synthase beta chain (mitochondrial)-like
           protein [Arabidopsis thaliana]
 gi|15809909|gb|AAL06882.1| At5g08670 [Arabidopsis thaliana]
 gi|19347814|gb|AAL86357.1| unknown protein [Arabidopsis thaliana]
 gi|21360569|gb|AAM47481.1| At5g08670/At5g08670 [Arabidopsis thaliana]
 gi|21436349|gb|AAM51344.1| unknown protein [Arabidopsis thaliana]
 gi|26452103|dbj|BAC43141.1| putative H+-transporting ATP synthase beta chain (mitochondrial)
           [Arabidopsis thaliana]
 gi|297317193|gb|EFH47615.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319213|gb|EFH49635.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata]
          Length = 556

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 18/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    + K +  + I    P  ++    ++   TGI+V+D+  P  
Sbjct: 164 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 223 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 281

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +
Sbjct: 282 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 341

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ S+L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 342 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 399

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 400 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 434


>gi|296117269|ref|ZP_06835860.1| F0F1 ATP synthase subunit beta [Gluconacetobacter hansenii ATCC
           23769]
 gi|295976162|gb|EFG82949.1| F0F1 ATP synthase subunit beta [Gluconacetobacter hansenii ATCC
           23769]
          Length = 493

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 103 GRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR++N +G+PID     L KG   +    +  PA + Q        TGI+V+D+  P   
Sbjct: 105 GRILNVIGEPIDDRGPVLAKGRSPIH---RSAPAFDEQAAATEILPTGIKVVDLLCPYLK 161

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------- 210
           G ++G+F G+G+GK+ ++     +       +S+   VGER RE  +   +         
Sbjct: 162 GGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKL 221

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
            GD+ + S V  V    +E P  R    L+ VT+AEYF   +G +VL  +D+I RF  + 
Sbjct: 222 DGDSTEGSKVALVYGQMNEPPGARARVALSGVTVAEYFRDVEGQDVLFFVDNIFRFTQAG 281

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   
Sbjct: 282 AEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPA 339

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VLNRS+AE G YP VDPL S SR  D     DE  ++   +  ++  ++ 
Sbjct: 340 ATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGDEHYQVARDVQRILQTYKS 399

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 400 LQDIIAILG 408


>gi|294786386|ref|ZP_06751640.1| ATP synthase F1, beta subunit [Parascardovia denticolens F0305]
 gi|315225947|ref|ZP_07867735.1| ATP synthase F1 sector beta subunit [Parascardovia denticolens DSM
           10105]
 gi|294485219|gb|EFG32853.1| ATP synthase F1, beta subunit [Parascardovia denticolens F0305]
 gi|315120079|gb|EFT83211.1| ATP synthase F1 sector beta subunit [Parascardovia denticolens DSM
           10105]
          Length = 497

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 30/319 (9%)

Query: 103 GRVINALGKPID---GDDSLG------------KGDLSMEIMSKVPPAMNRQRVEK---- 143
           G V+   G PI+   G+ +LG            + D  +E+  K P      R ++    
Sbjct: 94  GAVVTDTGGPIEVPVGNVTLGHVFDVSGHILNKQDDEQIEVKEKWPIHRAAPRFDQLESK 153

Query: 144 --GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
              F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    +   +S+   VGER
Sbjct: 154 TEMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGER 213

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
            RE  + I E      L K+ +V    DE P  R   PLTA+T+AEYF   +  +VLL +
Sbjct: 214 TREGNDLIGEMEEAGVLNKTALVFGQMDEPPGTRLRVPLTALTMAEYFRDVQNQDVLLFI 273

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +IT++ ++ V 
Sbjct: 274 DNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--SITSLQAIYVP 331

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D++ DP   +  + LD    L+R +A +G YP VDPL+S SR+ D  +         + 
Sbjct: 332 ADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYVGQAHYDCANR 391

Query: 376 LTHLIHRFEETRD-IRLIG 393
           +  ++ R +E +D I LIG
Sbjct: 392 VKAILQRNKELQDIIALIG 410


>gi|284999823|dbj|BAI67812.1| ATP synthase beta-subunit [Asterococcus superbus]
          Length = 376

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  K D ++ I    P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVKTDQTLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    L+A+T+AEYF    G +VL  +D+I RF  +
Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDFNGQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +    LD   VL+R+LA +G YP VDPL S S +  + W   +K      ++   + R+
Sbjct: 264 STTFVHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYNCAQAVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|95928943|ref|ZP_01311688.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684]
 gi|95134844|gb|EAT16498.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684]
          Length = 482

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 9/292 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ +  G PID      +      +    PP   R    + F+TGI+VID+ TPL  G +
Sbjct: 97  RMFDVFGNPIDRKPP-AENLQWRSVHQPSPPLSQRSTEPEVFETGIKVIDVLTPLERGGK 155

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219
            G+F G+G+GK+ LL+    +       +SL   +GER RE  E   D      L    +
Sbjct: 156 TGLFGGAGVGKTVLLTEMIHNMVHQHEGVSLFCGIGERCREGEELYRDMQQAGVLDNMAM 215

Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  EI+   G++P 
Sbjct: 216 IFGQMNEPPGSRFRVGHAALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEISGLMGQMPS 275

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
             GY  ++ +EL +L ERI  +  E G IT++ +V V  D+  DP A    S L   +VL
Sbjct: 276 RLGYQPTLSTELSQLQERI--ANTETGAITSIQAVYVPADDFTDPAAVHTFSHLSASVVL 333

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
           +R  A EG YP +DPL S S++A+ +        ++  +   + ++EE +DI
Sbjct: 334 SRKRASEGLYPAIDPLQSNSKMANPSIVGHHHDAIARQVRQTLAQYEEMKDI 385


>gi|186521400|ref|NP_568203.2| ATP binding / hydrogen ion transporting ATP synthase, rotational
           mechanism [Arabidopsis thaliana]
 gi|332003953|gb|AED91336.1| F-type H+-transporting ATPase subunit beta [Arabidopsis thaliana]
          Length = 556

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    + K +  + I    P  ++    ++   TGI+V+D+  P  
Sbjct: 164 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 223 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 281

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +
Sbjct: 282 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 341

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ S+L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 342 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 399

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SR+       +E       +  ++  ++
Sbjct: 400 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 459

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 460 NLQDIIAILG 469


>gi|91178112|gb|ABE27291.1| mitochondrial F-ATPase beta subunit [Meyerozyma guilliermondii]
          Length = 337

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 164/306 (53%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 19  LGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 77

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 78  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 135

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 136 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEV 195

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D +   +E   + S++   +  ++  +D
Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVASNVQQTLQAYKSLQD 313

Query: 389 IRLIGG 394
           I  I G
Sbjct: 314 IIAILG 319


>gi|22326673|ref|NP_680155.1| ATP synthase beta chain, mitochondrial, putative [Arabidopsis
           thaliana]
 gi|75333362|sp|Q9C5A9|ATPBO_ARATH RecName: Full=ATP synthase subunit beta-3, mitochondrial; Flags:
           Precursor
 gi|13548326|emb|CAC35873.1| H+-transporting ATP synthase beta chain (mitochondrial)-like
           protein [Arabidopsis thaliana]
 gi|26450906|dbj|BAC42560.1| putative H+-transporting ATP synthase beta chain (mitochondrial)
           [Arabidopsis thaliana]
 gi|29028952|gb|AAO64855.1| At5g08680 [Arabidopsis thaliana]
 gi|332003954|gb|AED91337.1| ATP synthase subunit beta-3 [Arabidopsis thaliana]
          Length = 559

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    + K +  + I    P  ++    ++   TGI+V+D+  P  
Sbjct: 167 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 225

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 226 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 284

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +
Sbjct: 285 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 344

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ S+L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 345 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 402

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SR+       +E       +  ++  ++
Sbjct: 403 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 462

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 463 NLQDIIAILG 472


>gi|294794509|ref|ZP_06759645.1| ATP synthase F1, beta subunit [Veillonella sp. 3_1_44]
 gi|294454839|gb|EFG23212.1| ATP synthase F1, beta subunit [Veillonella sp. 3_1_44]
          Length = 474

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     +E   V+  +  ++ ++ + +DI  I G
Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILG 388


>gi|255067774|ref|ZP_05319629.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256]
 gi|255047985|gb|EET43449.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256]
          Length = 465

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   D    I    P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIVDVLGTPVDEAGPIDT-DKHRAIHQTAPKFDELSATTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      S KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|269798588|ref|YP_003312488.1| ATP synthase F1 subunit beta [Veillonella parvula DSM 2008]
 gi|269095217|gb|ACZ25208.1| ATP synthase F1, beta subunit [Veillonella parvula DSM 2008]
          Length = 474

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     +E   V+  +  ++ ++ + +DI  I G
Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILG 388


>gi|16127677|ref|NP_422241.1| F0F1 ATP synthase subunit beta [Caulobacter crescentus CB15]
 gi|221236496|ref|YP_002518933.1| F0F1 ATP synthase subunit beta [Caulobacter crescentus NA1000]
 gi|81856162|sp|Q9A2V9|ATPB_CAUCR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|13425165|gb|AAK25409.1| ATP synthase F1, beta subunit [Caulobacter crescentus CB15]
 gi|220965669|gb|ACL97025.1| ATP synthase beta chain [Caulobacter crescentus NA1000]
          Length = 539

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 162/321 (50%), Gaps = 23/321 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR++N +G+PID    + + D+S  I    P    +    +   TGI+VI
Sbjct: 138 IRVPVGPGTLGRIMNVIGEPIDEQGPI-RSDISRTIHRDAPSFAEQTNTAEVLVTGIKVI 196

Query: 153 DIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+     L++  A++     V+   VGER RE  +   +
Sbjct: 197 DLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHE 255

Query: 209 YLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
            +  N+              +  +V    +E P  R    LT ++IAEYF   +G +VLL
Sbjct: 256 MIESNVNVDPKANNGSTEGSRCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLL 315

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ 
Sbjct: 316 FVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIY 373

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R +A +  +P VDPL S SR+ D     +E   V+
Sbjct: 374 VPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLVIGEEHYTVA 433

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++ +++  +DI  I G
Sbjct: 434 RRVQEVLQQYKALKDIIAILG 454


>gi|315604634|ref|ZP_07879697.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313646|gb|EFU61700.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 482

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 150/273 (54%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++     K F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186

Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D   +S+   VGER RE  + I E        K+ +V    DE P  R    LT +T+AE
Sbjct: 187 DHGGVSVFAGVGERTREGNDLIGEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 246

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+ +L ERI  +  
Sbjct: 247 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSA 304

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPLAS SR+ D
Sbjct: 305 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASSSRILD 364

Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            A    E   V++ +  ++ + +E +DI  I G
Sbjct: 365 PALVGREHYDVATHVKAILQKNKELQDIIAILG 397


>gi|118488735|gb|ABK96178.1| unknown [Populus trichocarpa]
          Length = 420

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 151/279 (54%), Gaps = 26/279 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+ ID      KGDL  E    I  + P  + +   ++   TGI+V+D+ 
Sbjct: 27  ATLGRIINVIGEAIDE-----KGDLKTEHYLPIHREAPSFVEQATEQQVLVTGIKVVDLL 81

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 82  APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 140

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 141 SGVIKLGDQQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 200

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 201 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 258

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 259 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 297


>gi|71733339|ref|YP_277280.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|118573721|sp|Q48BG5|ATPB_PSE14 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71553892|gb|AAZ33103.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 459

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID       G ++ E    I    P    +       +TGI+VID+ 
Sbjct: 82  ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 137 CPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++ 
Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI 
Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374

Query: 391 LIGG 394
            I G
Sbjct: 375 AILG 378


>gi|74151565|dbj|BAE38888.1| unnamed protein product [Mus musculus]
 gi|74189077|dbj|BAE39301.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGRMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|330890268|gb|EGH22929.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. mori str.
           301020]
          Length = 459

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 8/300 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +   +    I    P    +       +TGI+VID+  P  
Sbjct: 82  ATLGRIMDVLGNPIDEAGPIATQE-RWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFA 140

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L 
Sbjct: 141 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 200

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G 
Sbjct: 201 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 260

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 261 MPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDAT 318

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI  I G
Sbjct: 319 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDIIAILG 378


>gi|330937325|gb|EGH41327.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 430

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID       G ++ E    I    P    +       +TGI+VID+ 
Sbjct: 53  ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 107

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 108 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 167

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++ 
Sbjct: 168 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 227

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 228 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 285

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI 
Sbjct: 286 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 345

Query: 391 LIGG 394
            I G
Sbjct: 346 AILG 349


>gi|297157185|gb|ADI06897.1| F0F1 ATP synthase subunit beta [Streptomyces bingchenggensis BCW-1]
          Length = 484

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 155/293 (52%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LGK ++  ++  +      I  K P     +   + F+TG++V+D+ TP   G 
Sbjct: 105 GRVFNTLGKILNEPEAESEVTERWSIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 164

Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVREF-IEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R     +   + + VGER RE  +  +E      L K+ 
Sbjct: 165 KIGLFGGAGVGKTVLIQEMIVRVAKLHEGVSVFAGVGERTREGNDLMVEMEEAGVLDKTA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 225 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 285 SAVGYQPNLADEMGILQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
           L+R ++E+G YP VDPL S SR+ D  + S D     S +  ++ ++++ +DI
Sbjct: 343 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYDCASRVKSILQKYKDLQDI 395


>gi|6729935|pdb|1MAB|B Chain B, Rat Liver F1-Atpase
 gi|93279423|pdb|2F43|B Chain B, Rat Liver F1-Atpase
          Length = 479

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 91  LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 208

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 209 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 268

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 269 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 326

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 327 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 386

Query: 389 IRLIGG 394
           I  I G
Sbjct: 387 IIAILG 392


>gi|23503633|dbj|BAC20413.1| ATP synthase beta-subunit [Chlorogonium elongatum]
          Length = 376

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + ++ I  K P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVQQNQTLPIHRKAPLFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 148 EKNLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   +  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYATAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|83952825|ref|ZP_00961555.1| ATP synthase subunit B [Roseovarius nubinhibens ISM]
 gi|83835960|gb|EAP75259.1| ATP synthase subunit B [Roseovarius nubinhibens ISM]
          Length = 474

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + K   +  I  + P    +    +   TGI+V+D+  P  
Sbjct: 84  ATLGRILNVVGEPVDEGAPI-KATETRAIHQEAPEFQEQSTESEVLVTGIKVVDLLAPYA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 INPDNLEESQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKSGSITSVQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R+++E G YP VDPL S SRL D A   +E   V+  +  ++ R++
Sbjct: 319 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPAIVGEEHYQVARDVQGILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|298206869|ref|YP_003715048.1| ATP synthase subunit B [Croceibacter atlanticus HTCC2559]
 gi|83849503|gb|EAP87371.1| ATP synthase subunit B [Croceibacter atlanticus HTCC2559]
          Length = 501

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 162/336 (48%), Gaps = 40/336 (11%)

Query: 97  PSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P     GR+ N +G PIDG + + K GD  + I    P   +     +   TGI+VID+ 
Sbjct: 83  PIGDVYGRLFNVVGDPIDGMEDMPKTGDNGLPIHRNAPKFEDLSVSTEVLFTGIKVIDLI 142

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E 
Sbjct: 143 EPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLES 202

Query: 209 YL---GDNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
            +   GD+                       K+  V    +E P  R    L+ +TIAEY
Sbjct: 203 GIIKYGDDFMHSMEEGGWDLSKVDKTAMKDSKATFVFGQMNEPPGARARVALSGLTIAEY 262

Query: 245 F-----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           F       +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  
Sbjct: 263 FRDGAGDGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI-- 320

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR
Sbjct: 321 TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSR 380

Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +       +E       +  L+ R++E +DI  I G
Sbjct: 381 ILTADILGNEHYDCAQRVKELLQRYKELQDIIAILG 416


>gi|189183496|ref|YP_001937281.1| F0F1 ATP synthase subunit beta [Orientia tsutsugamushi str. Ikeda]
 gi|226740657|sp|B3CRK6|ATPB_ORITI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189180267|dbj|BAG40047.1| ATP synthase beta chain [Orientia tsutsugamushi str. Ikeda]
          Length = 478

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 162/318 (50%), Gaps = 20/318 (6%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           + ++       GR++N +G+PID    LG  K D   +I    P  +N+    K   TGI
Sbjct: 85  QIKVPVGKSILGRILNVVGQPID---DLGPIKCDNFSQIHKDAPKFINQSTSRKILITGI 141

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFI 206
           +VID+ TP   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 142 KVIDLLTPYISGGKIGLFGGAGVGKTVLIMEIINNVAKAYKGYTVFTGVGERTREGGDLY 201

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILD 257
           ++ +G N+         K  +V    +E P  R    LT +TIAE F    +  VLL +D
Sbjct: 202 KEMVGSNIIDLNKLENSKVTLVFGQMNEPPGARARVALTGLTIAESFRDMNEGEVLLFID 261

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  EI+T  G +P A GY  ++ +++  L ERI  +  + G IT++ ++ V  
Sbjct: 262 NIFRFTQAGAEISTLLGRIPSAVGYQPTLATDIGSLQERI--TSTKFGAITSIQAIYVPA 319

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-L 376
           D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D      E   V++ +
Sbjct: 320 DDLTDPAPVACFAHLDATTVLSRKIAELGIYPAVDPLNSSSQILDANVIGQEHYSVATKV 379

Query: 377 THLIHRFEETRDIRLIGG 394
             ++  ++  +D+  I G
Sbjct: 380 QEILQTYKSLQDVIAILG 397


>gi|23503625|dbj|BAC20409.1| ATP synthase beta-subunit [Carteria obtusa]
          Length = 376

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    +  + I  K P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVNAEEKLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+ +DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLSDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R+
Sbjct: 264 STTFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSARSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|297734279|emb|CBI15526.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 152/275 (55%), Gaps = 18/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    + K D  + I  + P  +++   ++   TGI+V+D+  P  
Sbjct: 27  ATLGRIINVIGEPIDERGDI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 85

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 86  RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 144

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 145 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 204

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 205 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 262

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 263 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 297


>gi|297565883|ref|YP_003684855.1| H(+)-transporting two-sector ATPase [Meiothermus silvanus DSM 9946]
 gi|296850332|gb|ADH63347.1| H(+)-transporting two-sector ATPase [Meiothermus silvanus DSM 9946]
          Length = 466

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 158/297 (53%), Gaps = 16/297 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +G+PIDG   +   +  + I       ++R++ E+  +TG+  ID
Sbjct: 79  RLGVSKEMVGRAFNGIGRPIDGLPPV-VAEKRLPINGSPINPVSREKPEEFIQTGVSAID 137

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206
           +   L  GQ++ +F+GSG+  + L +  AR        + F  V+ + +G   REV  F+
Sbjct: 138 MNMTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLGQGEGF-AVVFAAMGITQREVSYFL 196

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +++     L +SV+ +  +D+  + R + P  A+T AEY + + D +VL+IL  +T +  
Sbjct: 197 QEFERTGALARSVLFLNKADDPTVERLLTPRMALTAAEYLAFEHDYHVLVILTDMTNYCE 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI     E+P  RGYP  ++++L  + ER G    +KG++T +  + + GD+   PI
Sbjct: 257 ALREIGGAREEIPGRRGYPGYMYTDLASIYERAGVVHGKKGSVTQIPILSMPGDDITHPI 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376
            D    I +G I + R LA++G YPP++   S+SRL +         AD K+L   L
Sbjct: 317 PDLTGYITEGQIFIARELAQQGIYPPINVQPSLSRLMNNGIGKGKTRADHKELADQL 373


>gi|162146520|ref|YP_001600979.1| F0F1 ATP synthase subunit beta [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209543481|ref|YP_002275710.1| F0F1 ATP synthase subunit beta [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|190358669|sp|A9H9A8|ATPB_GLUDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161785095|emb|CAP54639.1| ATP synthase subunit beta [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531158|gb|ACI51095.1| ATP synthase F1, beta subunit [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 493

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 164/325 (50%), Gaps = 18/325 (5%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           ++V   G+  +       GR++N +G+PID    + K D    I  K P    +    + 
Sbjct: 87  EVVATGGQITVPVGPGTLGRILNVIGEPIDERGPV-KSDKRYPIHRKAPSFDEQAAATEI 145

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
             TGI+V+D+  P   G ++G+F G+G+GK+ ++     +       +S+   VGER RE
Sbjct: 146 LVTGIKVVDLLCPYLKGGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTRE 205

Query: 202 VREFIEDY-------LGDNL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGD 250
             +   +        LG++     K  +V    +E P  R    L+ +++AEYF   +G 
Sbjct: 206 GNDLYYEMQDAGVIKLGEDTTEGSKVALVYGQMNEPPGARARIALSGLSLAEYFRDEEGQ 265

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V
Sbjct: 266 DVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSV 323

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VLNRS+AE G YP VDPL S SR  D     +E 
Sbjct: 324 QAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGEEH 383

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            ++   +  ++  ++  +DI  I G
Sbjct: 384 YQVARDVQRILQTYKSLQDIIAILG 408


>gi|258690460|gb|ACV87992.1| ATP synthase beta subunit [Geodia gibberosa]
          Length = 387

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 17/312 (5%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS    GR++N +G+ +D    + + D    I  + P  ++    ++   TGI+V+D+
Sbjct: 58  VGPSTL--GRIMNVIGESVDERGPI-ESDTHASIHQEAPEFVDMSIDQEILVTGIKVVDL 114

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE 207
             P   G +IG+F G+G+GK+ L+     +         + + VGER RE      E IE
Sbjct: 115 LAPYAKGGKIGLFGGAGVGKTVLIQELINNVSKAHGGYSVFAGVGERTREGNDLYHEMIE 174

Query: 208 D---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263
                L D+  K  +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF 
Sbjct: 175 TGVISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGKDVLLFIDNIFRFT 234

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP
Sbjct: 235 QAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVFVPADDLTDP 292

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              +  + LD   VL+R+++E G YP VDPL S SR+ D     +E   V+  +  ++  
Sbjct: 293 APATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNVVGEEHYNVARGVQKILQD 352

Query: 383 FEETRDIRLIGG 394
           +   +DI  I G
Sbjct: 353 YRSLQDIIAILG 364


>gi|163753474|ref|ZP_02160598.1| H(+)-transporting two-sector ATPase, beta subunit [Kordia algicida
           OT-1]
 gi|161327206|gb|EDP98531.1| H(+)-transporting two-sector ATPase, beta subunit [Kordia algicida
           OT-1]
          Length = 502

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 160/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG   L K GD  + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGELPKDGDNGLSIHREAPKFEDLSTSTEVLYTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEEGGWDLSKVDKNAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  L+ R++E +DI  I G
Sbjct: 388 LGDEHYNCAQRVKELLQRYKELQDIIAILG 417


>gi|7708278|emb|CAB90064.1| ATP synthase beta subunit [Dischidia lanceolata]
          Length = 457

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 158/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
           +   GR+ N LG+PID    +     S   + K PPA  +   +   F+TGI+V+D+  P
Sbjct: 84  SLTLGRIFNVLGQPIDNLGPVATDTTSP--IHKSPPAFIQLETKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG--- 211
              G + G+F G+G+GK+ L+     +       +S+   VGER RE  +  ++      
Sbjct: 142 YRRGGKTGLFGGAGVGKTVLIMELINNIAKAHQGVSVFAGVGERTREGNDLYKEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 202 INEQNLSESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDEHYETAQQVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 EVQDIIAILG 389


>gi|224111564|ref|XP_002315902.1| mitochondrial beta subunit of F1 ATP synthase [Populus trichocarpa]
 gi|222864942|gb|EEF02073.1| mitochondrial beta subunit of F1 ATP synthase [Populus trichocarpa]
          Length = 559

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 151/279 (54%), Gaps = 26/279 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+ ID      KGDL  E    I  + P  + +   ++   TGI+V+D+ 
Sbjct: 166 ATLGRIINVIGEAIDE-----KGDLKTEHYLPIHREAPSFVEQATEQQVLVTGIKVVDLL 220

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 221 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 279

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 280 SGVIKLGDQQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 339

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 340 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 397

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 398 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 436


>gi|302834718|ref|XP_002948921.1| hypothetical protein VOLCADRAFT_80433 [Volvox carteri f.
           nagariensis]
 gi|300265666|gb|EFJ49856.1| hypothetical protein VOLCADRAFT_80433 [Volvox carteri f.
           nagariensis]
          Length = 580

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +   ++   I    P    +   ++   TGI+V+D+  P   G 
Sbjct: 125 GRIMNVIGEPVDEQGPIDAAEV-WSIHRDAPEFTEQSTEQEILVTGIKVVDLLAPYQRGG 183

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE     LGD
Sbjct: 184 KIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGD 243

Query: 213 NL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 244 KRGESKCTLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFVDNIFRFTQANSEV 303

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  
Sbjct: 304 SALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTF 361

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE G YP VDPL S SR+ +     A+   +   +  ++  ++  +D
Sbjct: 362 AHLDATTVLSRSIAELGIYPAVDPLDSTSRMLNPNIIGAEHYNVARGVQKVLQDYKNLQD 421

Query: 389 IRLIGG 394
           I  I G
Sbjct: 422 IIAILG 427


>gi|258623013|ref|ZP_05718027.1| ATP synthase subunit B [Vibrio mimicus VM573]
 gi|258625009|ref|ZP_05719932.1| ATP synthase subunit B [Vibrio mimicus VM603]
 gi|262166762|ref|ZP_06034499.1| ATP synthase beta chain [Vibrio mimicus VM223]
 gi|262172741|ref|ZP_06040419.1| ATP synthase beta chain [Vibrio mimicus MB-451]
 gi|258582707|gb|EEW07533.1| ATP synthase subunit B [Vibrio mimicus VM603]
 gi|258584716|gb|EEW09451.1| ATP synthase subunit B [Vibrio mimicus VM573]
 gi|261893817|gb|EEY39803.1| ATP synthase beta chain [Vibrio mimicus MB-451]
 gi|262026478|gb|EEY45146.1| ATP synthase beta chain [Vibrio mimicus VM223]
          Length = 467

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  ++   I    P    +    +  +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDERGDIGAEEV-YSIHRAAPSYEEQSSATELLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL--------G 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +           
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQ 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PELSKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|238927815|ref|ZP_04659575.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
 gi|304437791|ref|ZP_07397741.1| ATP synthase F1 sector beta subunit [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|238884362|gb|EEQ48000.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
 gi|304369239|gb|EFM22914.1| ATP synthase F1 sector beta subunit [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 470

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 10/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GRV N LG+ +D +     G+  +  + +  P  + Q       +TGI+V+D+  P 
Sbjct: 87  ATLGRVFNVLGETVDHNPE-PVGNKEVWPIHRAAPKFDEQETSTQILETGIKVVDLIAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214
             G ++G+F G+G+GK+ L+     +   +     + + VGER RE  +   +      +
Sbjct: 146 SRGGKVGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVI 205

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   
Sbjct: 206 DKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALL 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD
Sbjct: 266 GRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLD 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
              VL+R +AE G YP VDPL S SR+ D      E  ++   +  ++ +++E +DI  I
Sbjct: 324 ATTVLSRQIAELGIYPAVDPLDSTSRILDPHVIGQEHYEVARGVQAVLQKYKELQDIIAI 383

Query: 393 GG 394
            G
Sbjct: 384 LG 385


>gi|147905995|ref|NP_001083034.1| mitochondrial ATP synthase beta subunit [Danio rerio]
 gi|133778774|gb|AAI34216.1| Zgc:163069 protein [Danio rerio]
          Length = 524

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +   D    I +  P  +     ++   TGI+V+D+  P   G
Sbjct: 138 LGRIMNVIGEPIDERGPIVT-DKFAAIHADAPEFVEMSVQQEILVTGIKVVDLLAPYAKG 196

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 197 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISL 255

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 256 KDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 315

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 316 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 373

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   +   +  ++  ++  +D
Sbjct: 374 AHLDATTVLSRAIAELGIYPAVDPLDSTSRILDPNIIGEEHYNIARGVQKILQDYKSLQD 433

Query: 389 IRLIGG 394
           I  I G
Sbjct: 434 IIAILG 439


>gi|330469844|ref|YP_004407587.1| F0F1 ATP synthase subunit beta [Verrucosispora maris AB-18-032]
 gi|328812815|gb|AEB46987.1| F0F1 ATP synthase subunit beta [Verrucosispora maris AB-18-032]
          Length = 478

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 157/306 (51%), Gaps = 23/306 (7%)

Query: 103 GRVINALGK--------PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           G V NA+G+         I  DD  G       I  K P   + +   +  +TGI+VID+
Sbjct: 98  GHVFNAIGECLNLTEGETIQADDHWG-------IHRKAPAFADLEPKTEMLETGIKVIDL 150

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLG 211
             P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +   
Sbjct: 151 LAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIHEMTD 210

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
              + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I RF  +  E+
Sbjct: 211 SGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNIFRFTQAGSEV 270

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D++ DP   +  
Sbjct: 271 STLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADDYTDPAPATTF 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD    L RS++++G YP VDPLAS SR+    +   E  ++ S +  ++ R+++ +D
Sbjct: 329 AHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKRILQRYKDLQD 388

Query: 389 IRLIGG 394
           I  I G
Sbjct: 389 IIAILG 394


>gi|297806943|ref|XP_002871355.1| hypothetical protein ARALYDRAFT_487710 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317192|gb|EFH47614.1| hypothetical protein ARALYDRAFT_487710 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 559

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+PID    + K +  + I    P  ++    ++   TGI+V+D+  P  
Sbjct: 167 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 225

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 226 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 284

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +
Sbjct: 285 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 344

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ S+L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 345 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 402

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SR+       +E       +  ++  ++
Sbjct: 403 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 462

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 463 NLQDIIAILG 472


>gi|254440915|ref|ZP_05054408.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 307]
 gi|198250993|gb|EDY75308.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 307]
          Length = 474

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 161/308 (52%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G P+D    + K D    I  + P   ++    +   TGI+VID+  P   G
Sbjct: 86  LGRILNVTGDPVDEKGPV-KSDQRRSIHGEAPKFEDQSTATEILVTGIKVIDLLAPYTKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG----- 211
            +IG+F G+G+GK+ L+     +    KV     + + VGER RE  +   + +      
Sbjct: 145 GKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGVIN 202

Query: 212 -DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
            +NL++S   +V    +E P  R    LT +++AE F    G +VL  +D+I RF  +  
Sbjct: 203 LENLEESKIALVYGQMNEPPGARMRIALTGLSLAEQFRDDTGSDVLFFVDNIFRFTQAGS 262

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V  D+  DP   +
Sbjct: 263 EVSALLGRIPSAVGYQPTLATDMGAMQERI--ASTKGGSITSVQAVYVPADDLTDPAPAT 320

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R+++E+G YP VDPL S SRL D     DE  K+ + +  ++ R++  
Sbjct: 321 SFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGDEHYKVATDVQQILQRYKSL 380

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 381 QDIIAILG 388


>gi|147838606|emb|CAN69512.1| hypothetical protein VITISV_018718 [Vitis vinifera]
          Length = 560

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 151/278 (54%), Gaps = 21/278 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    + K D  + I  + P  +++   ++   TGI+V+D+  P  
Sbjct: 165 ATLGRIINVIGEPIDERGEI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 223

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 224 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 282

Query: 209 YLGDNL-----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
            LGD        K  +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF
Sbjct: 283 KLGDKQASFSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 342

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 343 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 400

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           P   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 401 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 438


>gi|148284424|ref|YP_001248514.1| F0F1 ATP synthase subunit beta [Orientia tsutsugamushi str.
           Boryong]
 gi|190358695|sp|A5CDA5|ATPB_ORITB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146739863|emb|CAM79804.1| ATP synthase beta chain [Orientia tsutsugamushi str. Boryong]
          Length = 478

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 162/318 (50%), Gaps = 20/318 (6%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           + ++       GR++N +G+PID    LG  K D   +I    P  +N+    K   TGI
Sbjct: 85  QIKVPVGKSILGRILNVVGQPID---DLGPIKCDNFSQIHKDAPKFINQSTSRKILITGI 141

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFI 206
           +VID+ TP   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 142 KVIDLLTPYISGGKIGLFGGAGVGKTVLIMEIINNVAKAYKGYTVFTGVGERTREGGDLY 201

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILD 257
           ++ +G N+         K  +V    +E P  R    LT +TIAE F    +  VLL +D
Sbjct: 202 KEMVGSNIIDLNKLENSKVTLVFGQMNEPPGARARVALTGLTIAESFRDMNEGEVLLFID 261

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  EI+T  G +P A GY  ++ +++  L ERI  +  + G IT++ ++ V  
Sbjct: 262 NIFRFTQAGAEISTLLGRIPSAVGYQPTLATDIGSLQERI--TSTKFGAITSIQAIYVPA 319

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-L 376
           D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D      E   V++ +
Sbjct: 320 DDLTDPAPVACFAHLDATTVLSRKIAELGIYPAVDPLNSSSQILDANVIGQEHYSVATQV 379

Query: 377 THLIHRFEETRDIRLIGG 394
             ++  ++  +D+  I G
Sbjct: 380 QEILQTYKSLQDVIAILG 397


>gi|145222906|ref|YP_001133584.1| F0F1 ATP synthase subunit beta [Mycobacterium gilvum PYR-GCK]
 gi|315443371|ref|YP_004076250.1| ATP synthase, F1 subunit beta [Mycobacterium sp. Spyr1]
 gi|190358682|sp|A4T8K2|ATPB_MYCGI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145215392|gb|ABP44796.1| ATP synthase F1, beta subunit [Mycobacterium gilvum PYR-GCK]
 gi|315261674|gb|ADT98415.1| ATP synthase, F1 beta subunit [Mycobacterium sp. Spyr1]
          Length = 476

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +   GK      I  K PP    +   +  +TG++V+D+ TP   G 
Sbjct: 97  GHVFNALGDCLD-EPGYGKDFEHWSIHRKPPPFSELEPRTEMLETGLKVVDLLTPYVRGG 155

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 156 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELEDANVLKDTA 215

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 216 LVFGQMDEPPGTRMRVALSALTMAEFFRDEQQQDVLLFIDNIFRFTQAGSEVSTLLGRMP 275

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD    
Sbjct: 276 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 333

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++  +G +P VDPLAS S + D A   DE  ++   +  ++ R+++ +DI  I G
Sbjct: 334 LSRTVFSKGIFPAVDPLASSSTILDPAVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 391


>gi|300024907|ref|YP_003757518.1| ATP synthase F1 subunit beta [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526728|gb|ADJ25197.1| ATP synthase F1, beta subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 477

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 163/311 (52%), Gaps = 24/311 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+P+D    +     S+  + +  P    Q  E     TGI+V+D+  P   G
Sbjct: 87  GRIMNVIGEPVDEAGPIKTP--SVRAIHQPSPTFADQATEAQILVTGIKVVDLLAPYAKG 144

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +  +
Sbjct: 145 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYYEMIESKVNLD 203

Query: 214 LKKS---------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
            KK+          +V    +E P  R    L+ +T+AE+F  +G +VL  +D+I RF  
Sbjct: 204 PKKNNGSAKGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP 
Sbjct: 264 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +  ++ ++
Sbjct: 322 PAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPRIVGEEHYQVARKVQAILQKY 381

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 382 KSLQDIIAILG 392


>gi|149029718|gb|EDL84889.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide, isoform CRA_a [Rattus norvegicus]
          Length = 529

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|150399122|ref|YP_001322889.1| V-type ATP synthase subunit B [Methanococcus vannielii SB]
 gi|167016634|sp|A6UP55|VATB_METVS RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|150011825|gb|ABR54277.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Methanococcus vannielii SB]
          Length = 462

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 25/319 (7%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+    DI  +       E++  +  + F     +I  S    GR+ N  GKP+DG  
Sbjct: 47  GQVLEAREDIAVVQVFEGTSELNTSETRVRFTGETAKIGVSKDMLGRIFNGAGKPLDGGP 106

Query: 118 SL---GKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
            +    K D++   +  +S+ PP    Q       TGI  ID    L  GQ+I +F+GSG
Sbjct: 107 EIIAEKKVDINGYPLNPVSRNPPNAFVQ-------TGISTIDGTNTLVRGQKIPIFSGSG 159

Query: 172 IGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
           +  + L +  AR        + F  V+ + +G    E   F++++     L+K+VV +  
Sbjct: 160 LPHNMLAAQIARQAKVRGEGEQF-AVVFAAMGITSEESNYFMDEFKKTGALEKAVVFINL 218

Query: 224 SDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           +D+  I R + P  A+T AEY +  KG +VL+IL  +T +  ++REIA    E+P  RGY
Sbjct: 219 ADDPAIERIITPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  ++++L  L ER G  + ++G +T +  + +  D+   PI D    I +G IVL+R L
Sbjct: 279 PGYMYTDLASLYERAGRVKGKEGTVTQIPILTMPHDDITHPIPDLTGYITEGQIVLSREL 338

Query: 343 AEEGRYPPVDPLASVSRLA 361
             +G YPPVD L S+SRLA
Sbjct: 339 NRKGIYPPVDILPSLSRLA 357


>gi|23503593|dbj|BAC20393.1| ATP synthase beta-subunit [Chloromonas augustae]
          Length = 376

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K D ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKADTALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|15642757|ref|NP_232390.1| F0F1 ATP synthase subunit beta [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121591160|ref|ZP_01678465.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80]
 gi|121729382|ref|ZP_01682049.1| ATP synthase F1, beta subunit [Vibrio cholerae V52]
 gi|147674488|ref|YP_001218421.1| F0F1 ATP synthase subunit beta [Vibrio cholerae O395]
 gi|153212975|ref|ZP_01948569.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587]
 gi|153803370|ref|ZP_01957956.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3]
 gi|153823452|ref|ZP_01976119.1| ATP synthase F1, beta subunit [Vibrio cholerae B33]
 gi|153827188|ref|ZP_01979855.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2]
 gi|153829668|ref|ZP_01982335.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39]
 gi|227082876|ref|YP_002811427.1| ATP synthase F1, beta subunit [Vibrio cholerae M66-2]
 gi|229508277|ref|ZP_04397781.1| ATP synthase beta chain [Vibrio cholerae BX 330286]
 gi|229508629|ref|ZP_04398124.1| ATP synthase beta chain [Vibrio cholerae B33]
 gi|229515969|ref|ZP_04405426.1| ATP synthase beta chain [Vibrio cholerae TMA 21]
 gi|229517155|ref|ZP_04406601.1| ATP synthase beta chain [Vibrio cholerae RC9]
 gi|229520153|ref|ZP_04409580.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80]
 gi|229524893|ref|ZP_04414298.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426]
 gi|229606551|ref|YP_002877199.1| F0F1 ATP synthase subunit beta [Vibrio cholerae MJ-1236]
 gi|254226932|ref|ZP_04920498.1| ATP synthase F1, beta subunit [Vibrio cholerae V51]
 gi|254291148|ref|ZP_04961945.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226]
 gi|254851555|ref|ZP_05240905.1| ATP synthase subunit beta [Vibrio cholerae MO10]
 gi|255746826|ref|ZP_05420772.1| ATP synthase beta chain [Vibrio cholera CIRS 101]
 gi|262155906|ref|ZP_06029028.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1]
 gi|262167080|ref|ZP_06034795.1| ATP synthase beta chain [Vibrio cholerae RC27]
 gi|14547933|sp|Q9KNH5|ATPB_VIBCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|172047489|sp|A5F459|ATPB_VIBC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808173|sp|C3LSI9|ATPB_VIBCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|9657365|gb|AAF95903.1| ATP synthase F1, beta subunit [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546977|gb|EAX57122.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80]
 gi|121628663|gb|EAX61135.1| ATP synthase F1, beta subunit [Vibrio cholerae V52]
 gi|124116201|gb|EAY35021.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587]
 gi|124121094|gb|EAY39837.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3]
 gi|125620537|gb|EAZ48905.1| ATP synthase F1, beta subunit [Vibrio cholerae V51]
 gi|126519021|gb|EAZ76244.1| ATP synthase F1, beta subunit [Vibrio cholerae B33]
 gi|146316371|gb|ABQ20910.1| ATP synthase F1, beta subunit [Vibrio cholerae O395]
 gi|148874844|gb|EDL72979.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39]
 gi|149738911|gb|EDM53235.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2]
 gi|150422993|gb|EDN14943.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226]
 gi|227010764|gb|ACP06976.1| ATP synthase F1, beta subunit [Vibrio cholerae M66-2]
 gi|227012008|gb|ACP08218.1| ATP synthase F1, beta subunit [Vibrio cholerae O395]
 gi|229338474|gb|EEO03491.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426]
 gi|229342747|gb|EEO07738.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80]
 gi|229346218|gb|EEO11190.1| ATP synthase beta chain [Vibrio cholerae RC9]
 gi|229347069|gb|EEO12031.1| ATP synthase beta chain [Vibrio cholerae TMA 21]
 gi|229354343|gb|EEO19271.1| ATP synthase beta chain [Vibrio cholerae B33]
 gi|229354550|gb|EEO19472.1| ATP synthase beta chain [Vibrio cholerae BX 330286]
 gi|229369206|gb|ACQ59629.1| ATP synthase beta chain [Vibrio cholerae MJ-1236]
 gi|254847260|gb|EET25674.1| ATP synthase subunit beta [Vibrio cholerae MO10]
 gi|255735583|gb|EET90982.1| ATP synthase beta chain [Vibrio cholera CIRS 101]
 gi|262024466|gb|EEY43152.1| ATP synthase beta chain [Vibrio cholerae RC27]
 gi|262030358|gb|EEY49000.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1]
 gi|327485232|gb|AEA79639.1| ATP synthase beta chain [Vibrio cholerae LMA3894-4]
          Length = 467

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  ++   I    P    +    +  +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDERGDIGAEEV-YSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL--------G 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +           
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQ 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|179279|gb|AAA51808.1| ATP synthase beta subunit [Homo sapiens]
          Length = 529

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 150/283 (53%), Gaps = 16/283 (5%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           + +I       GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V
Sbjct: 131 QLKIPVGPETLGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKV 189

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203
           +D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      
Sbjct: 190 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYH 248

Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
           E IE     L D   K  +V    ++ P  R    LT +T+AEYF   +G +VLL +D+I
Sbjct: 249 EMIESGVINLKDATSKVALVYGQMNQPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 308

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+
Sbjct: 309 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 366

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             DP   +  + LD   VL+R++AE G YP VDPL S SR+ D
Sbjct: 367 LTDPAPATTFADLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 409


>gi|238018582|ref|ZP_04599008.1| hypothetical protein VEIDISOL_00409 [Veillonella dispar ATCC 17748]
 gi|237865053|gb|EEP66343.1| hypothetical protein VEIDISOL_00409 [Veillonella dispar ATCC 17748]
          Length = 474

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     +E   V+  +  ++ ++ + +DI  I G
Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYTVARGVQEVLQKYRDLQDIIAILG 388


>gi|226307392|ref|YP_002767352.1| ATP synthase beta chain [Rhodococcus erythropolis PR4]
 gi|229490005|ref|ZP_04383858.1| ATP synthase F1, beta subunit [Rhodococcus erythropolis SK121]
 gi|259585449|sp|C1A1X8|ATPB_RHOE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226186509|dbj|BAH34613.1| ATP synthase beta chain [Rhodococcus erythropolis PR4]
 gi|229323106|gb|EEN88874.1| ATP synthase F1, beta subunit [Rhodococcus erythropolis SK121]
          Length = 483

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D    LG+      I  K PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 105 GHVFNALGDCLD-TPGLGRDGEQWGIHRK-PPAFDQLEGKTEILETGIKVIDLLTPYVKG 162

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ +
Sbjct: 163 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDT 222

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G +
Sbjct: 223 ALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRM 282

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD   
Sbjct: 283 PSAVGYQPTLADEMGELQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDATT 340

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +++ G YP VDPL+S SR+ +     A+  ++ + +  ++ +++E +DI  I G
Sbjct: 341 ELSRPISQMGIYPAVDPLSSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 399


>gi|145608354|ref|XP_360642.2| ATP synthase beta chain, mitochondrial [Magnaporthe oryzae 70-15]
 gi|145015832|gb|EDK00322.1| ATP synthase beta chain, mitochondrial [Magnaporthe oryzae 70-15]
          Length = 514

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 15/304 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K D  + I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 126 LGRIMNVTGDPIDERGPI-KTDKYLPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARG 184

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 185 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQL 243

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D   K  +V    +E P  R    LT +T+AE F ++G +VLL +D+I RF  +  E++ 
Sbjct: 244 DGESKVSLVFGQMNEPPGARARVALTGLTVAEQFRNEGQDVLLFIDNIFRFTQAGSEVSA 303

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 304 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPAPATTFAH 361

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E G YP VDPL S SR+ D      E  ++ + +  ++  ++  +DI 
Sbjct: 362 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYEVATRVQQILQEYKSLQDII 421

Query: 391 LIGG 394
            I G
Sbjct: 422 AILG 425


>gi|94495684|ref|ZP_01302264.1| ATP synthase F1, beta subunit [Sphingomonas sp. SKA58]
 gi|94425072|gb|EAT10093.1| ATP synthase F1, beta subunit [Sphingomonas sp. SKA58]
          Length = 481

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 21/313 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + + +L   I +K P  +++        TGI+VID+  P  
Sbjct: 86  ATLGRILNVVGEPIDERGPV-QTELRSPIHAKAPEFIDQSTDASILVTGIKVIDLLAPYA 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         + + VGER RE  +   ++L  N+  
Sbjct: 145 KGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHEFLDANVIA 204

Query: 215 -----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
                       K  +V    +E P  R    L+ +TIAEYF   +  +VL  +D+I RF
Sbjct: 205 KDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYFRDVENQDVLFFVDNIFRF 264

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  D
Sbjct: 265 TQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTNKGSITSVQAVYVPADDLTD 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VLNR+++E G YP VDPL S SR L  +    +  +   ++  ++ 
Sbjct: 323 PAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARAVQSILQ 382

Query: 382 RFEETRDIRLIGG 394
           +++  +DI  I G
Sbjct: 383 KYKSLQDIIAILG 395


>gi|34536477|dbj|BAC87672.1| beta subunit of ATP synthase [Chlamydomonas noctigama]
          Length = 376

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 161/313 (51%), Gaps = 30/313 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   D ++ I  K P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGPVKIED-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLQDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR------LADKAWSADEKKLVSSLTHLIH 381
             + LD   VL+R+LA +G YP VDPL S S       L DK +SA +     S+   + 
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQPWILGDKHYSAAQ-----SVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 321 RYKELQDIIAILG 333


>gi|66826095|ref|XP_646402.1| ATP synthase beta chain, mitochondrial [Dictyostelium discoideum
           AX4]
 gi|74997414|sp|Q55CS9|ATPB_DICDI RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|60474371|gb|EAL72308.1| ATP synthase beta chain, mitochondrial [Dictyostelium discoideum
           AX4]
          Length = 651

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 170/339 (50%), Gaps = 16/339 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    + I + +  G LV + G   + P      GR++N +G+PIDG   +   +    
Sbjct: 157 IVRCVALDITDGLGRGALVLNTGSPLMVPVGQATLGRIMNVIGEPIDGCGPIPATE-KRP 215

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    PP  +        +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 216 IWRAPPPFADLAPSASILETGIKVIDLLAPYSRGGKIGLFGGAGVGKTVLIQELINNIAK 275

Query: 188 DK---VIISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLT 237
                 + + VGER RE  +   + +   +        K  +V    +E P  R    LT
Sbjct: 276 AHGGFSVFTGVGERTREGNDLYHEMVEAGVIKKEGPGSKVALVFGQMNEPPGARARVTLT 335

Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AEYF  ++G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ER
Sbjct: 336 GLTVAEYFRDAEGQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGCMQER 395

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  ++K  G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S
Sbjct: 396 IATTKK--GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPCVDPLDS 453

Query: 357 VSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            S + D      +  K+ + +  ++  ++  +DI  I G
Sbjct: 454 TSLMMDPNIIGVEHYKVATDVQKILQEYKSLQDIIAILG 492


>gi|87121037|ref|ZP_01076928.1| ATP synthase subunit B [Marinomonas sp. MED121]
 gi|86163529|gb|EAQ64803.1| ATP synthase subunit B [Marinomonas sp. MED121]
          Length = 458

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ +    I  + P    +       +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDEKGPIGEEE-RWAIHREAPSYAEQSSDNALLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K 
Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  S LD  +V
Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVV 319

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP +DPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 LSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 377


>gi|15805728|ref|NP_294424.1| V-type ATP synthase subunit B [Deinococcus radiodurans R1]
 gi|12585483|sp|Q9RWG7|VATB_DEIRA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|6458406|gb|AAF10279.1|AE001926_11 v-type ATP synthase, B subunit [Deinococcus radiodurans R1]
          Length = 471

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 152/276 (55%), Gaps = 11/276 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           R+  S    GR  + LG+PIDG  ++  +  LS++     P A  R + E+  +TGI  I
Sbjct: 81  RLGVSKEMIGRRFDGLGRPIDGLPAVVAEQRLSVDGQPMNPAA--RAKPEEFIQTGISTI 138

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206
           D+ T L  GQ++ +F+GSG+  + L +  AR            V+ + +G   REV  F 
Sbjct: 139 DVQTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L +SV+ +  +D+  + R + P  A+T AEY +   G +VL+IL  +T +  
Sbjct: 199 QEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCE 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI     E+P  RG+P  ++++L  L ER G  E + G++T V  + +  D+   PI
Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVEGKPGSVTQVPILSMPDDDITHPI 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G IV++R+L  +G +PP++PL S+SRL
Sbjct: 319 PDLTGYITEGQIVVDRTLNSKGVFPPINPLPSLSRL 354


>gi|221128055|ref|XP_002155577.1| PREDICTED: similar to ATP synthase beta subunit [Hydra
           magnipapillata]
 gi|260222684|emb|CBA32489.1| ATP synthase subunit beta 1 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 471

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 17/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +   +L+  I  K P        ++  +TGI+VID+  P  
Sbjct: 87  ATLGRIMDVLGAPIDERGPVAS-ELTASIHRKAPTYDELSPSQELLETGIKVIDLVCPFA 145

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +       
Sbjct: 146 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 204

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
             ++L KS V  V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  
Sbjct: 205 NLEDLPKSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 264

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 265 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 322

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D     +E      ++   + R++E 
Sbjct: 323 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNTARAVQGTLQRYKEL 382

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 383 RDIIAILG 390


>gi|119368477|sp|Q1AVH9|ATPB_RUBXD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 503

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV++ LG+P+D    + G+ D    I    P   +     + F +GI+VID+  P+  
Sbjct: 102 LGRVLDVLGEPVDEQGPVEGEAD-RWPIHRPAPKFEDLSTKAEQFVSGIKVIDLLCPVRR 160

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE-VREFIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L++    +         + + VGER RE    + E      LK 
Sbjct: 161 GGKVGLFGGAGVGKTVLITELINNIALQYEGTSVFTGVGERTREGTALYGEMEEAGVLKN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + ++    +E P  R    LT VTIAEYF    G +VL  LD+I RFA +  E++   G 
Sbjct: 221 TALIFGQMNEPPGARFRVGLTGVTIAEYFRDVLGQDVLFFLDNIFRFAQAGNEVSALMGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ +E+  L ERI  +  +KG+IT+  +V V  D+  DP   +V + LD  
Sbjct: 281 MPSEVGYQPTLGTEMGALQERI--TSTKKGSITSFQAVYVPADDPTDPAPFTVFAHLDST 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           + L+RSL E+  +P VDPLAS S + D      E  ++   +  ++ R++E +DI  I G
Sbjct: 339 VELSRSLFEQAIFPAVDPLASSSTILDPDVVGQEHYEVAQEVKGILQRYKELQDIIAILG 398


>gi|91178132|gb|ABE27301.1| mitochondrial F-ATPase beta subunit [Candida rugosa]
          Length = 337

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 158/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G P+D    + K D    I ++ P    +    +  +TGI+V+D+  P   G
Sbjct: 19  SGRILNVTGDPVDERGPV-KTDKFRPIHAEAPAFDEQATSAEVLETGIKVVDLLAPYAKG 77

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--G 211
            +IG+F G+G+GK+  +    +  A++     V    VGER RE     +E IE  +   
Sbjct: 78  GKIGLFGGAGVGKTVFIQESINNIAKAHGGYSVFTG-VGERTREGNDLYKEMIESGVINL 136

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 137 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGKDVLLFVDNIFRFTQAGSEVS 196

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  +  +++  L ERI  +  +KG++T+V +V V  D+  DP   +  +
Sbjct: 197 ALLGRIPSAVGYQPTSATDMGALQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTFA 254

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R+++E G YP VDPL S SRL D A    E     +S+   +  ++  +DI
Sbjct: 255 HLDATTVLSRAISELGIYPAVDPLDSKSRLLDAAVVGQEHYDTATSVQQTLQAYKSLQDI 314

Query: 390 RLIGG 394
             I G
Sbjct: 315 IAILG 319


>gi|54792127|ref|NP_599191.1| ATP synthase subunit beta, mitochondrial precursor [Rattus
           norvegicus]
 gi|114562|sp|P10719|ATPB_RAT RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|71681130|gb|AAH99743.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Rattus norvegicus]
          Length = 529

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|326935486|ref|XP_003213801.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Meleagris
           gallopavo]
          Length = 441

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/281 (33%), Positives = 148/281 (52%), Gaps = 16/281 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D
Sbjct: 46  RIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVVD 104

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E 
Sbjct: 105 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 163

Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R
Sbjct: 164 IESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 223

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  
Sbjct: 224 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDLT 281

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           DP   +  + LD   VL+R++AE G YP VDPL S SR+ D
Sbjct: 282 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 322


>gi|219112331|ref|XP_002177917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410802|gb|EEC50731.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 501

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 22/313 (7%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPL 158
            GR+IN +G+P+D  G   L K       + +  P    Q R +    TGI+V+D+  P 
Sbjct: 108 LGRIINVIGEPVDEKGPIFLSKEAEKYAPLHRAAPTFTEQGRSQDILVTGIKVVDLLAPY 167

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREF---------- 205
             G +IG+F G+G+GK+ ++     +   +     + + VGER RE  +           
Sbjct: 168 AKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVI 227

Query: 206 -IEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
            I++  G     K+ +V    +E P  R    LT + IAEYF   +G +VLL +D+I RF
Sbjct: 228 KIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRF 287

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  D
Sbjct: 288 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTGKGSITSVQAVYVPADDLTD 345

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+RS+AE G YP VDPL S SR+ D +        +  S   L+ 
Sbjct: 346 PAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARSTQKLLQ 405

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 406 DYKSLQDIIAILG 418


>gi|331269017|ref|YP_004395509.1| V-type ATPase subunit B [Clostridium botulinum BKT015925]
 gi|329125567|gb|AEB75512.1| V-type ATPase, B subunit [Clostridium botulinum BKT015925]
          Length = 460

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 170/325 (52%), Gaps = 17/325 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    + GR   I  S    GRV + LG+P DG  
Sbjct: 42  GKVLEISEDKALIQLFEGSTGINLKDTKTRFLGRPLEIGLSEDMLGRVFDGLGRPKDGGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +    K D++ E ++      +R    +  +TG+  ID    L  GQ++ VF+GSG+  
Sbjct: 102 KIIPEEKRDINGEPLN----PFSRDYPSEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDES 227
           + L +  AR      SD    V+ + +G    E + FIED+    ++ ++V+ +  +++ 
Sbjct: 158 AELAAQIARQAKVLGSDSKFAVVFAAMGITFEEAQFFIEDFTQTGSIDRTVLFMNLANDP 217

Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            + R   P  A+T AE+ +  KG +VL+I+  +T +A ++RE++    E+P  RGYP  +
Sbjct: 218 AVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  L ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L ++G
Sbjct: 278 YTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337

Query: 347 RYPPVDPLASVSRLADKAWSADEKK 371
             PP+D L S+SRL DK    D+ +
Sbjct: 338 IMPPIDVLPSLSRLKDKGIGKDKTR 362


>gi|310827780|ref|YP_003960137.1| sodium-transporting two-sector ATPase [Eubacterium limosum KIST612]
 gi|308739514|gb|ADO37174.1| sodium-transporting two-sector ATPase [Eubacterium limosum KIST612]
          Length = 469

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 19/356 (5%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           + Q      LG+V+ +N D  +V +     G  IS   + F      +  S    GRV +
Sbjct: 32  IEQADGEKRLGKVLEVNGDKAMVQLYESSQGLRISNSKVRFQGHGIELGVSKDMLGRVFD 91

Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
            +G+P DG   +    K D++   M+ V     R    +  +TG+  ID    L  GQ++
Sbjct: 92  GMGRPTDGGPEIIPEKKLDINGSPMNPVA----RDYPAEFIQTGVSAIDGLNTLVRGQKL 147

Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
            VF+GSG+  + L +  AR      +D    V+ + +G    E   F++D+     ++++
Sbjct: 148 PVFSGSGLPHAQLAAQIARQARVLDNDEGFAVVFAAIGITFEEADFFVKDFRRTGAIERA 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
           V+ +  +++  + R   P  A+T AEY + + D  VL+IL  IT +A ++RE++    E+
Sbjct: 208 VLFMNYANDPAVERISTPRMAITCAEYLAYELDMQVLVILTDITNYAEALREVSAARKEV 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  RGYP  ++++L  L ER G    +KG+IT +  + +  D+   PI D    I +G I
Sbjct: 268 PGRRGYPGYLYTDLATLYERAGRMRGKKGSITQIPILSMPEDDKTHPIPDLTGYITEGQI 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADE--KKLVSSLTHLIHRFEETRDIR 390
           +L+R L   G  PP+D L S+SRL DK     +  K    ++  L   +   +D +
Sbjct: 328 ILSRDLYRRGIEPPIDVLPSLSRLKDKGIGEGKTRKDHADTMNQLFSAYARGKDAK 383


>gi|261213283|ref|ZP_05927565.1| ATP synthase beta chain [Vibrio sp. RC341]
 gi|262190641|ref|ZP_06048876.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93]
 gi|262402102|ref|ZP_06078666.1| ATP synthase beta chain [Vibrio sp. RC586]
 gi|260837557|gb|EEX64260.1| ATP synthase beta chain [Vibrio sp. RC341]
 gi|262033479|gb|EEY51982.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93]
 gi|262351748|gb|EEZ00880.1| ATP synthase beta chain [Vibrio sp. RC586]
          Length = 467

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  ++   I    P    +    +  +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDERGDIGAEEV-YSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL--------G 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +           
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQ 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PELSKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|225456079|ref|XP_002280824.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 554

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 152/275 (55%), Gaps = 18/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    + K D  + I  + P  +++   ++   TGI+V+D+  P  
Sbjct: 162 ATLGRIINVIGEPIDERGDI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 220

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 221 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 279

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 280 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 339

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 340 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 397

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 398 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 432


>gi|108804474|ref|YP_644411.1| F0F1 ATP synthase subunit beta [Rubrobacter xylanophilus DSM 9941]
 gi|108765717|gb|ABG04599.1| ATP synthase F1, beta subunit [Rubrobacter xylanophilus DSM 9941]
          Length = 513

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV++ LG+P+D    + G+ D    I    P   +     + F +GI+VID+  P+  
Sbjct: 112 LGRVLDVLGEPVDEQGPVEGEAD-RWPIHRPAPKFEDLSTKAEQFVSGIKVIDLLCPVRR 170

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE-VREFIEDYLGDNLKK 216
           G ++G+F G+G+GK+ L++    +         + + VGER RE    + E      LK 
Sbjct: 171 GGKVGLFGGAGVGKTVLITELINNIALQYEGTSVFTGVGERTREGTALYGEMEEAGVLKN 230

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + ++    +E P  R    LT VTIAEYF    G +VL  LD+I RFA +  E++   G 
Sbjct: 231 TALIFGQMNEPPGARFRVGLTGVTIAEYFRDVLGQDVLFFLDNIFRFAQAGNEVSALMGR 290

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ +E+  L ERI  +  +KG+IT+  +V V  D+  DP   +V + LD  
Sbjct: 291 MPSEVGYQPTLGTEMGALQERI--TSTKKGSITSFQAVYVPADDPTDPAPFTVFAHLDST 348

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           + L+RSL E+  +P VDPLAS S + D      E  ++   +  ++ R++E +DI  I G
Sbjct: 349 VELSRSLFEQAIFPAVDPLASSSTILDPDVVGQEHYEVAQEVKGILQRYKELQDIIAILG 408


>gi|325968451|ref|YP_004244643.1| V-type H+-transporting ATPase B [Vulcanisaeta moutnovskia 768-28]
 gi|323707654|gb|ADY01141.1| V-type H+-transporting ATPase subunit B [Vulcanisaeta moutnovskia
           768-28]
          Length = 476

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 16/320 (5%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V  +GR  R+  +    GRV++  G+P DG   L   +  ++I  +      R+  E
Sbjct: 76  GSTVKFYGRTLRMPVTEDLLGRVLDGKGQPRDGL-PLPPAEEYLDINGEPLNPYAREYPE 134

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196
           +  +TG+ VID    +  GQ++ +F+G+G+  + L +  AR            +I + +G
Sbjct: 135 EPIETGVSVIDGLNTMVRGQKLPIFSGTGLPHNMLAAQVARQATVRGHEEEFAIIFAAMG 194

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLL 254
            +  E   F+ ++      + +V+V      PI  R + P TA+TIAEY +   D +VL+
Sbjct: 195 LKSEEALFFLNEFRRTGALRRLVMVLNLASDPIAERILTPRTALTIAEYLAWYRDYHVLV 254

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  +T +A ++RE++++ GELP  RGYP  ++++   + ER G ++ +KG+IT    + 
Sbjct: 255 ILTDMTNYAEALRELSSSKGELPGRRGYPGYMYTDFATIYERTGRAKGKKGSITQFPILT 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA----WSADEK 370
           +  D+   PI D    I +G +VL+R+L  +G YPP D + S+SRL   A     + D+ 
Sbjct: 315 MPHDDITHPIPDLTGYITEGQLVLSRTLWGKGIYPPFDVIMSLSRLMKDAVGEGKTRDDH 374

Query: 371 KLVSSLTHLIHRFEETRDIR 390
           K V++   LI  +  + D+R
Sbjct: 375 KYVAN--QLIAAYSRSLDVR 392


>gi|313228038|emb|CBY23188.1| unnamed protein product [Oikopleura dioica]
          Length = 480

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 171/334 (51%), Gaps = 26/334 (7%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVP 133
           E +  G +V   G   R+       GR+IN +G+ ID      +G +  E    I ++ P
Sbjct: 72  ERLVRGQIVNDTGAPIRVPVGPSTLGRIINVIGEAIDE-----RGPVETEHYAPIHAEAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDK 189
              + +   +  +TGI+V+D+  P   G +IG+F G+G+GK+     L++  A++     
Sbjct: 127 ALTDTEGAAEILETGIKVVDLIAPYSKGGKIGLFGGAGVGKTVFIMELINNVAKAHGGYS 186

Query: 190 VIISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           V    VGER RE  +   + +   +        K  +V    +E P  R    LT +T+A
Sbjct: 187 VFAG-VGERTREGNDLYHEMIEGGVINIDGPGSKVALVYGQMNEPPGARARVALTGLTVA 245

Query: 243 EYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  + 
Sbjct: 246 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TT 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT+V ++ V  D+  DP   +  S LD   VL+R++AE G YP VDPL S SR+ 
Sbjct: 304 TKKGSITSVQAIYVPADDLTDPSPATTFSHLDATTVLSRAIAELGFYPAVDPLESTSRIM 363

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D     +E     +++  ++  ++  +DI  I G
Sbjct: 364 DPHVVGNEHYDCAAAVKKILQDYKGLQDIIAILG 397


>gi|258690304|gb|ACV87914.1| ATP synthase beta subunit [Darwinella muelleri]
          Length = 427

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 147/276 (53%), Gaps = 22/276 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  E    I  + P   +    ++  +TGI+V+D+  P
Sbjct: 64  LGRIINVIGEPIDE-----RGPVETESKSPIHQEAPEFADMNVDQEILETGIKVVDLLAP 118

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY----- 209
              G +IG+F G+G+GK+ L+     +         + + VGER RE  +   +      
Sbjct: 119 YTKGGKIGLFGGAGVGKTVLIMELINNVAHAHGGYSVFAGVGERTREGNDLYHEMITSGV 178

Query: 210 --LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  + 
Sbjct: 179 ISLKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 238

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   
Sbjct: 239 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIFVPADDLTDPAPA 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +  + LD   VL+R+++E G YP VDPL S SR+ D
Sbjct: 297 TTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMD 332


>gi|256387193|gb|ACU80597.1| ATP synthase beta subunit [Pycnophyes sp. MR-2009]
          Length = 335

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 164/319 (51%), Gaps = 25/319 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTG 148
            RI       G +IN +G+PID      +G ++ +    I  + P  +     ++   TG
Sbjct: 11  IRIPVGPETLGGIINVIGEPIDE-----RGPVTTQKQAAIHQEAPEFVEMSTEQEILVTG 65

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE   
Sbjct: 66  IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 124

Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
              E IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +
Sbjct: 125 LYHEMIESGVISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDDEGQDVLLFI 184

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V 
Sbjct: 185 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAIYVP 242

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     +E   V+  
Sbjct: 243 ADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSTSRIMDANIVGEEHYQVARG 302

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 303 VQKILQDYKSLQDIIAILG 321


>gi|195495396|ref|XP_002095249.1| GE22293 [Drosophila yakuba]
 gi|194181350|gb|EDW94961.1| GE22293 [Drosophila yakuba]
          Length = 627

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 160/315 (50%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R++      GR++N +G PID D    K D    I +  P   +     +   TGI+VI
Sbjct: 178 IRVAVGKAVLGRILNVVGDPID-DRGEIKSDYYSFIHNDAPELTDLSVKPEILVTGIKVI 236

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE      E
Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295

Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
            IE     L D   K V+V    +E P  R    LT +TIAEYF    G +VLL +D+I 
Sbjct: 296 MIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 355

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+ 
Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
           +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   
Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 473

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 474 LQAYKSLQDIIAILG 488


>gi|91178138|gb|ABE27304.1| mitochondrial F-ATPase beta subunit [Candida viswanathii]
          Length = 337

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 20/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G 
Sbjct: 20  GRIINVVGEPID-DRGPIECKERKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    +  
Sbjct: 79  KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  +D
Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQD 313

Query: 389 IRLIGG 394
           I  I G
Sbjct: 314 IIAILG 319


>gi|198421396|ref|XP_002128220.1| PREDICTED: similar to ATP synthase, H+ transporting mitochondrial
           F1 complex, beta subunit [Ciona intestinalis]
          Length = 520

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 151/288 (52%), Gaps = 24/288 (8%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFK 146
           G  R+       GR+IN +G+PID      +G +  E    I +  P  ++    ++  +
Sbjct: 120 GPIRVPVGPGTLGRIINVIGEPIDE-----RGPVDTEHFAGIHAPPPDLIDTGGAQEILE 174

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREV 202
           TGI+V+D+  P   G +IG+F G+G+GK+     L++  A++     V    VGER RE 
Sbjct: 175 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVFIMELINNVAKAHGGYSVFAG-VGERTREG 233

Query: 203 REFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLL 254
            +   +        L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 234 NDLYHEMIDSGVISLTDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDMEGQDVLL 293

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 294 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 351

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           V  D+  DP   +  S LD   VL+R ++E G YP VDPL S SR+ D
Sbjct: 352 VPADDLTDPSPATTFSHLDATTVLSRQVSELGFYPAVDPLESSSRIMD 399


>gi|84622325|ref|YP_449697.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|122879043|ref|YP_199371.6| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188578711|ref|YP_001915640.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|118573780|sp|Q2P7Q4|ATPB_XANOM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573781|sp|Q5H4Y4|ATPB_XANOR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740691|sp|B2SQB0|ATPB_XANOP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|84366265|dbj|BAE67423.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188523163|gb|ACD61108.1| ATP synthase F1, beta subunit [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 468

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|282849843|ref|ZP_06259227.1| ATP synthase F1, beta subunit [Veillonella parvula ATCC 17745]
 gi|294792757|ref|ZP_06757904.1| ATP synthase F1, beta subunit [Veillonella sp. 6_1_27]
 gi|282580780|gb|EFB86179.1| ATP synthase F1, beta subunit [Veillonella parvula ATCC 17745]
 gi|294456656|gb|EFG25019.1| ATP synthase F1, beta subunit [Veillonella sp. 6_1_27]
          Length = 474

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G
Sbjct: 92  LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+
Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +
Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+RS+AE G YP VDPL S SR+ D     +E   V+  +  ++ ++ + +DI  I G
Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILG 388


>gi|43641|emb|CAA49776.1| ATP synthase subunit [Halobacterium salinarum]
          Length = 471

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 166/335 (49%), Gaps = 25/335 (7%)

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
           G+G++ S+    F     ++  +    GRV++  G PIDG   +   D  ++I+ +    
Sbjct: 61  GVGKDASV---RFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDD-RVDIVGEAINP 116

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------- 188
             R+  E+  +TG+  ID    L  GQ++ +F+GSG+  S L    AR            
Sbjct: 117 HAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETD 176

Query: 189 -------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
                   V+   +G    E  EF++D+     L++SVV +  +D+  + R + P  A+T
Sbjct: 177 DDEGSEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALT 236

Query: 241 IAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEY + + D +VL+IL  +T +  ++R+I     E+P  RGYP  ++++L +L ER G 
Sbjct: 237 TAEYLAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGR 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E ++G++T +  + + GD+   PI D    I +G I++NR L  +G  PPV+ L S+SR
Sbjct: 297 IEGKEGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIMMNRDLNSQGVTPPVNVLPSLSR 356

Query: 360 LADKAWS-----ADEKKLVSSLTHLIHRFEETRDI 389
           L D         AD   +   L       EE RD+
Sbjct: 357 LMDDGIGEGLTRADHGDVSDQLYAAYAEGEELRDL 391


>gi|114563|sp|P05440|ATPB_RHOBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|45980|emb|CAA77303.1| ATPase beta subunit [Rhodobacter blasticus]
          Length = 478

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 162/310 (52%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +   +    I  K P   ++    +   TGI+VID+  P  
Sbjct: 88  ATLGRILNVVGEPIDERGPIAATE-KRAIHQKAPDFQSQSTESQILVTGIKVIDLLAPYS 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      EFIE  +
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGYSVFAGVGERTREGNDLYHEFIESGV 204

Query: 211 G--DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              D+L+KS V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 205 INIDDLEKSKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++ +L ERI  +  + G+IT+V ++ V  D+  DP  
Sbjct: 265 GSEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKAGSITSVQAIYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD    L+R+++E G YP VDPL S SRL D     +E      ++  ++ R++
Sbjct: 323 ATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRLMDPQILGEEHYNTARAVQGILQRYK 382

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 383 SLQDIIAILG 392


>gi|322694068|gb|EFY85908.1| ATP synthase beta chain precursor [Metarhizium acridum CQMa 102]
          Length = 587

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN  G PID    + K D  + I S+ P   ++    +   TGI+V+D+  P  
Sbjct: 197 ATLGRIINVTGDPIDERGPI-KTDKFLPIHSEPPEFTDQSTSAEILVTGIKVVDLLAPYA 255

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 256 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 314

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 315 QLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSE 374

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 375 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATT 432

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D     +E     + +  ++  ++  +
Sbjct: 433 FAHLDATTVLSRGISELGIYPAVDPLDSTSRMLDPRIVGEEHYNTATRVQQILQEYKSLQ 492

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 493 DIIAILG 499


>gi|163745700|ref|ZP_02153060.1| F0F1 ATP synthase subunit beta [Oceanibulbus indolifex HEL-45]
 gi|161382518|gb|EDQ06927.1| F0F1 ATP synthase subunit beta [Oceanibulbus indolifex HEL-45]
          Length = 474

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 164/322 (50%), Gaps = 28/322 (8%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKT 147
           + R+       GR++N  G  +D      KG ++ E    +    P    Q  E     T
Sbjct: 76  QIRVPVGTATLGRIMNVTGDAVDE-----KGPVNSEATRAIHGDAPEFAEQSTETQILVT 130

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE- 201
           GI+VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE 
Sbjct: 131 GIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGLSVFAGVGERTREG 188

Query: 202 ---VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253
                E IE    + DNL +S   +V    +E P  R    LT +T+AE F  + G +VL
Sbjct: 189 NDLYHEMIESGVIVPDNLVESKIALVYGQMNEPPGARMRIALTGLTLAEQFRDESGSDVL 248

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  ++   G+IT+V +V
Sbjct: 249 FFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGVMQERIASTKS--GSITSVQAV 306

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372
            V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D     DE  K+
Sbjct: 307 YVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIIGDEHYKV 366

Query: 373 VSSLTHLIHRFEETRDIRLIGG 394
            + +  ++ R++  +DI  I G
Sbjct: 367 ATDVQQVLQRYKSLQDIIAILG 388


>gi|119350551|gb|ABL63226.1| AtpB [Sphaeroplea soleirolii var. crassisepta]
          Length = 392

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   + ++ I  K P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNMGPVNNEE-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   EK      ++   + R++E 
Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQTIKKTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|139001535|dbj|BAF51687.1| ATP synthase beta subunit [Dicyema acuticephalum]
 gi|139001541|dbj|BAF51688.1| ATP synthase beta subunit [Dicyema acuticephalum]
          Length = 414

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 149/282 (52%), Gaps = 18/282 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI   A   GR++N +G+PID    + + D+   I +  P        +   +TGI+V+D
Sbjct: 21  RIPVGAATLGRIMNVIGEPIDERGPI-QTDVYSSIYADAPEFSEMSTEQMVLETGIKVVD 79

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E 
Sbjct: 80  LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNEM 138

Query: 206 IE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSIT 260
           IE    D  G N K S+V     +E P  R    LT +T+AEYF    G +VLL +D+I 
Sbjct: 139 IESGIVDLKGSNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDHDGQDVLLFVDNIF 197

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+ 
Sbjct: 198 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTNKGSITSVQAIYVPADDL 255

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD   VL+R+++E   YP VDPL S SR+ D
Sbjct: 256 TDPAPATTFAHLDATTVLSRAISELAIYPAVDPLDSRSRMLD 297


>gi|119350505|gb|ABL63203.1| AtpB [Haematococcus lacustris]
          Length = 392

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 161/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G+ ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 38  LGRIFNVLGEPVDNLGPVNTGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 96

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 97  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 157 NLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 216

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 217 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 274

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK   ++  +   + R++E +
Sbjct: 275 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQNVKKTLQRYKELQ 333

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 334 DIIAILG 340


>gi|300858267|ref|YP_003783250.1| ATP synthase subunit beta [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685721|gb|ADK28643.1| ATP synthase beta chain [Corynebacterium pseudotuberculosis FRC41]
          Length = 481

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +  LG+      I    PP    +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD    
Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A +G YP V+PL S SR+ +     +   ++   + H++ + +E +DI  I G
Sbjct: 340 LDRAIASKGIYPAVNPLTSTSRILEPGVVGERHYEVAQRVIHILQKNKELQDIIAILG 397


>gi|289191502|ref|YP_003457443.1| ATP synthase, B subunit [Methanocaldococcus sp. FS406-22]
 gi|288937952|gb|ADC68707.1| ATP synthase, B subunit [Methanocaldococcus sp. FS406-22]
          Length = 465

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 18/333 (5%)

Query: 59  LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           +GQV+  R  L +V +     G       + F     +I  S    GR+ N  GKPIDG 
Sbjct: 46  MGQVLEAREGLAVVQVFEGTTGLSTKDTKVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGG 105

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  ++I       ++R+      +TGI  ID    L  GQ++ +F+GSG+  + 
Sbjct: 106 PEIVP-EKELDINGYPLNPVSRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 164

Query: 177 LLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           L +  AR        + F  V+ + +G    E   F+E++     L+++VV +  +D+  
Sbjct: 165 LAAQIARQAKVRGEGEKF-AVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLADDPA 223

Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R + P  A+T+AEY + + D +VL+IL  +T +  ++REI+    E+P  RGYP  ++
Sbjct: 224 IERILTPRIALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMY 283

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++L  + ER G  +   G IT +  + +  D+   PI D    I +G IVL+R L  +G 
Sbjct: 284 TDLATIYERAGRVKGRTGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGI 343

Query: 348 YPPVDPLASVSRLADKAWSA-----DEKKLVSS 375
           YPPVD L S+SRLA           D KK+V+ 
Sbjct: 344 YPPVDVLPSLSRLAGNGQGPGKTREDHKKVVNQ 376


>gi|41615057|ref|NP_963555.1| hypothetical protein NEQ263 [Nanoarchaeum equitans Kin4-M]
 gi|40068781|gb|AAR39116.1| NEQ263 [Nanoarchaeum equitans Kin4-M]
          Length = 416

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 158/305 (51%), Gaps = 7/305 (2%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           ++I+ S  + G + N  G+PI G     +    +  ++  P A  R+   +   TGI  I
Sbjct: 61  YKIAVSEDYIGGIFNGFGEPIKGPKPYPEDYRDINGLAINPYA--RKVPNEILYTGISSI 118

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII-SLVGERGREVREFIEDYLG 211
           D+  PL  GQ+I +F+  G+    L    AR+   DK II + +G      + FI++++ 
Sbjct: 119 DVAHPLLKGQKIAIFSPPGLPMERLALQIARNVAKDKTIIFAAIGVPSDIYKMFIDEFIN 178

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
              +  S + ++ +D SPI +   P  A+T+AEY +  K  +VL+++  +T +A ++REI
Sbjct: 179 TKAIMNSAIFISKADSSPIEKIYTPRVALTLAEYLAFEKNRDVLVLMLDMTNYADALREI 238

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +T   E+P  RGYP  ++++L  + ER G + K  G+IT +  + + G++    + D   
Sbjct: 239 STLRKEIPSRRGYPAYLYTDLASIYERSGLTSK--GSITLIPMLTMPGNDITHVVPDLTG 296

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            I +G  VL++ L  +  YPP+D L S+SRLA    S   KK    L     +  E RDI
Sbjct: 297 YITEGQYVLSQDLHSKNIYPPIDLLKSLSRLAKNGMSKKHKKYADILIKSYAKGLEARDI 356

Query: 390 RLIGG 394
             I G
Sbjct: 357 ATIVG 361


>gi|22298068|ref|NP_681315.1| F0F1 ATP synthase subunit beta [Thermosynechococcus elongatus BP-1]
 gi|81844966|sp|Q8DLG8|ATPB_THEEB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|22294246|dbj|BAC08077.1| ATP synthase beta subunit [Thermosynechococcus elongatus BP-1]
          Length = 482

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D   ++   + ++ I    P     +     F+TGI+VID+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDEKGAVNATE-TLPIHRPAPSFTQLETKPSVFETGIKVIDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  + D
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVID 213

Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
               +  K  +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 KDDPSKSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+RSLA +G YP VDPL S S +       +E  +   ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRSLAAKGIYPAVDPLGSTSNMLQPDIVGEEHYQTARAVQATLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|289665457|ref|ZP_06487038.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289668361|ref|ZP_06489436.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 468

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|291615006|ref|YP_003525163.1| H(+)-transporting two-sector ATPase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585118|gb|ADE12776.1| H(+)-transporting two-sector ATPase [Sideroxydans lithotrophicus
           ES-1]
          Length = 464

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 170/334 (50%), Gaps = 22/334 (6%)

Query: 43  VCLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-- 97
           V LGD VV   H G+  +  GQVIR + ++V I  +   +++   DL   W RF   P  
Sbjct: 25  VGLGDRVVVRDHSGRRRN--GQVIRTSNEMVLIQVLEGTDDL---DLERTWVRFLDEPFD 79

Query: 98  ---SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
              S    GRV N LG+P DG   L          + V PA  R    +  +TG+  +D 
Sbjct: 80  IPLSPDILGRVFNGLGQPRDGRPPLFSKIRRNVNGAPVNPAA-RAYPREFIQTGLSAVDG 138

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIED 208
              L  GQ++ +F+GSG+  + L +   R       +    V+ + +G    +   F E 
Sbjct: 139 LNSLVRGQKLPIFSGSGLPHNRLAAQIVRQARLPGEESHFAVVFAAMGVSYSDANFFKET 198

Query: 209 YLGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
           +    + ++VV+ +  +DE  I R + P  A+T AEY +   D +VL+++  +T +A ++
Sbjct: 199 FADSGVLRNVVMFLNLADEPAIERLILPRAALTTAEYLAFTLDLHVLVVMTDMTHYAEAL 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE+AT  G++P  +GYP  ++S+L  + ER G      G+IT V  + +  D+   PI D
Sbjct: 259 REVATAKGDVPARKGYPGYLYSDLAEIYERAGRIRDRHGSITMVPVLSMPSDDITHPIPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               I +G +VL+R+L  +G YPPVD   S+SRL
Sbjct: 319 LTGYITEGQLVLSRTLNNQGIYPPVDIPPSLSRL 352


>gi|119350543|gb|ABL63222.1| AtpB [Parallela transversalis]
          Length = 392

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +G  + S+ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVGNQE-SLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   EK      ++   + R++E 
Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|119182499|ref|XP_001242378.1| ATP synthase beta chain, mitochondrial [Coccidioides immitis RS]
          Length = 521

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKLAPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGVMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 367

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     DE  ++ + +  +I  ++  +DI
Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDEHYQVATRVQQMIQEYKSLQDI 427

Query: 390 RLIGG 394
             I G
Sbjct: 428 IAILG 432


>gi|15790972|ref|NP_280796.1| V-type ATP synthase subunit B [Halobacterium sp. NRC-1]
 gi|169236719|ref|YP_001689919.1| V-type ATP synthase subunit B [Halobacterium salinarum R1]
 gi|12229705|sp|Q9HNE4|VATB_HALSA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|229558012|sp|B0R754|VATB_HALS3 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|10581553|gb|AAG20276.1| H+-transporting ATP synthase subunit B [Halobacterium sp. NRC-1]
 gi|167727785|emb|CAP14573.1| A-type ATP synthase subunit B [Halobacterium salinarum R1]
          Length = 471

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 166/335 (49%), Gaps = 25/335 (7%)

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
           G+G++ S+    F     ++  +    GRV++  G PIDG   +   D  ++I+ +    
Sbjct: 61  GVGKDASV---RFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDD-RVDIVGEAINP 116

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------- 188
             R+  E+  +TG+  ID    L  GQ++ +F+GSG+  S L    AR            
Sbjct: 117 HAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETD 176

Query: 189 -------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
                   V+   +G    E  EF++D+     L++SVV +  +D+  + R + P  A+T
Sbjct: 177 DDEGSEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALT 236

Query: 241 IAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEY + + D +VL+IL  +T +  ++R+I     E+P  RGYP  ++++L +L ER G 
Sbjct: 237 TAEYLAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGR 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E ++G++T +  + + GD+   PI D    I +G I++NR L  +G  PPV+ L S+SR
Sbjct: 297 IEGKEGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIMMNRDLNSQGVTPPVNVLPSLSR 356

Query: 360 LADKAWS-----ADEKKLVSSLTHLIHRFEETRDI 389
           L D         AD   +   L       EE RD+
Sbjct: 357 LMDDGIGEGLTRADHGDVSDQLYAAYAEGEELRDL 391


>gi|241953968|ref|XP_002419705.1| ATP synthase subunit beta, mitochondrial precursor, putative; F1F0
           ATP synthase beta subunit, putative [Candida
           dubliniensis CD36]
 gi|223643046|emb|CAX41920.1| ATP synthase subunit beta, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 504

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 118 LGRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 176

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 177 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 235

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 236 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 293

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 294 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 351

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  +
Sbjct: 352 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQ 411

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 412 DIIAILG 418


>gi|319407766|emb|CBI81413.1| ATP synthase beta chain [Bartonella sp. 1-1C]
          Length = 530

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 178/363 (49%), Gaps = 28/363 (7%)

Query: 56  SDNLGQVIRINL------DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINA 108
           +DNLG  + + +      + V    +   E +  G  V+  G     P      GR++N 
Sbjct: 85  TDNLGNKLVLEVAQHLGENTVRTIAMDTTEGLVRGQKVYDTGAQICVPVGEATLGRIMNV 144

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+P+D D  L        I  + P  + +    +   TGI+VID+  P   G ++G+F 
Sbjct: 145 IGEPVD-DAGLIMATKKRSIHQEAPQYVEQSTESEILVTGIKVIDLLAPYSKGGKVGLFG 203

Query: 169 GSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNLK----- 215
           G+G+GK+ L+    +  A++     V    VGER RE      E IE  +  + +     
Sbjct: 204 GAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVNVDPRENGST 262

Query: 216 ---KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
              K  +V    +E P  R    L+ +TIAE F  +G +VL  +D+I RF  +  E++  
Sbjct: 263 IGSKCALVYGQMNEPPGARARVALSGLTIAENFRDEGQDVLFFVDNIFRFTQAGAEVSAL 322

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP   +  + L
Sbjct: 323 LGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTDPAPATSFAHL 380

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R++  +DI  
Sbjct: 381 DATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQRYKSLQDIIA 440

Query: 392 IGG 394
           I G
Sbjct: 441 ILG 443


>gi|303256393|ref|ZP_07342407.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47]
 gi|331001480|ref|ZP_08325098.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT
           11859]
 gi|302859884|gb|EFL82961.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47]
 gi|329568209|gb|EGG50026.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT
           11859]
          Length = 467

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 12/300 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+P+D    +G+ +  M I    P            +TGI+VID+  P   G
Sbjct: 91  LGRIMDVLGRPVDEAGEIGE-EKRMPIHRAAPKFDELSPSVDLLETGIKVIDLVCPFAKG 149

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LK 215
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  + +G++  L 
Sbjct: 150 GKVGLFGGAGVGKTVNMMELINNIAKAYGGYSVFAG-VGERTREGNDFYHE-MGESKVLD 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G ++LL +D+I RF  +  E++   G 
Sbjct: 208 KVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILLFIDNIYRFTLAGTEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  
Sbjct: 268 MPSAVGYQPTLAEEMGKLQERI--ASTKVGSITSIQAVYVPADDLTDPSPATTFGHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +VL+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RDI  I G
Sbjct: 326 VVLSRDIAALGIYPAVDPLDSTSRQIDPHIIGEEHYSVTRRVQATLQRYKELRDIIAILG 385


>gi|208751250|gb|ACI31230.1| ATP synthase CF1 beta subunit [Volvox carteri]
 gi|261888140|gb|ACY05995.1| ATP synthase CF1 beta subunit [Volvox carteri f. nagariensis]
          Length = 491

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 107 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 165

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 166 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 225

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 226 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 342 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|213401042|gb|ACJ47169.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Tribolium
           confusum]
          Length = 315

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 147/272 (54%), Gaps = 20/272 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG   +E + + PP+   Q++ E+   TGI+VID+  P   G
Sbjct: 25  GRIFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 83

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 84  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVMD 141

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF   +  +VL  +D+I RF  +  
Sbjct: 142 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 201

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+   G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   +
Sbjct: 202 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTAGSITSVQAIYVPADDLTDPAPAT 259

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             S LD   VL+R +AE G YP VDPL S S+
Sbjct: 260 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQ 291


>gi|116871845|ref|YP_848626.1| F0F1 ATP synthase subunit beta [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123458107|sp|A0AFR1|ATPB1_LISW6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|116740723|emb|CAK19843.1| ATP synthase F1, beta subunit [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 456

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 202/410 (49%), Gaps = 32/410 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGESVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG     + ++   I  + P   +    ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPE-PEAEVKWPIFREQPLLRDLDTSKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F     + VGER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVF-----TGVGERVREGIGLYKELEASGVLS 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   + +++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPNFVGERHYQLAVQVKYVLQRYTELQEIINVL 380

Query: 394 GYRPGVDLILDKA-VHQVPIIYDFLKQ----SPSDLSSEDVFQEITKKLQ 438
           G     D   DK  VH+   I +FL Q    S     +E +F E+   L+
Sbjct: 381 GMAELSD--DDKNLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEMEDLLE 428


>gi|2662066|dbj|BAA23688.1| proton-translocating ATPase, beta subunit [Ruminococcus albus]
          Length = 479

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 156/297 (52%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG P+D   +    +   EI  + P    +    +  +TGI+VID+  P   G +
Sbjct: 90  RMFNLLGDPVDNLPAPETAE-RWEIHREPPSYEEQTAANEILETGIKVIDLIAPYLKGGK 148

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      + K+V+
Sbjct: 149 IGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGERTREGNDLYWEMKESGVIDKTVL 208

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 209 VYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 269 AVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +RS+A  G +P VDPL S SR+       +E  ++   +  ++ R+ E +DI  I G
Sbjct: 327 SRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVARQVQSILQRYVELQDIIAIMG 383


>gi|116204743|ref|XP_001228182.1| ATP synthase beta chain, mitochondrial precursor [Chaetomium
           globosum CBS 148.51]
 gi|88176383|gb|EAQ83851.1| ATP synthase beta chain, mitochondrial precursor [Chaetomium
           globosum CBS 148.51]
          Length = 519

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 157/307 (51%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G PID    + K D  + I ++ P  +++    +   TGI+V+D+  P  
Sbjct: 128 ATLGRIMNVTGDPIDERGPI-KTDKFLPIHAEAPEFVDQSTTAEILVTGIKVVDLLAPYA 186

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 187 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 245

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 246 QLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 305

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 306 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATT 363

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D      E   + S +  ++  ++  +
Sbjct: 364 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYDIASRVQQILQEYKSLQ 423

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 424 DIIAILG 430


>gi|190345407|gb|EDK37286.2| ATP synthase beta chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
          Length = 489

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 164/306 (53%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 104 LGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 162

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 163 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 220

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 221 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEV 280

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 281 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 338

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D +   +E   + S++   +  ++  +D
Sbjct: 339 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVASNVQQTLQAYKSLQD 398

Query: 389 IRLIGG 394
           I  I G
Sbjct: 399 IIAILG 404


>gi|23503629|dbj|BAC20411.1| ATP synthase beta-subunit [Haematococcus lacustris]
          Length = 376

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 161/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G+ ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNLGPVNTGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 150 NLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 210 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK   ++  +   + R++E +
Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQNVKKTLQRYKELQ 326

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 327 DIIAILG 333


>gi|119947323|ref|YP_945003.1| F0F1 ATP synthase subunit beta [Psychromonas ingrahamii 37]
 gi|190358237|sp|A1T0Y9|ATPB2_PSYIN RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|119865927|gb|ABM05404.1| ATP synthase F1, beta subunit [Psychromonas ingrahamii 37]
          Length = 465

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 16/344 (4%)

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122
           +I   +V    +G  + +S G  V   G+    P      GR++N LG+PID    +G  
Sbjct: 44  QIGGGVVRCIAMGASDGLSRGLDVTDTGKPITVPVGTATLGRIMNVLGEPIDMCGEIGAT 103

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    I  + P    +       + GI+VID+  P   G +IG+F G+G+GK+  +    
Sbjct: 104 E-HYGIHREAPTYEEQSASVATLEVGIKVIDLICPFSKGGKIGLFGGAGVGKTVNMMELI 162

Query: 183 RSDCFDKVIISL---VGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILR 231
            +       +S+   VGER RE  +F        + +     L K  +V    +E P  R
Sbjct: 163 NNIALKHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEKPELSKVAMVYGQMNEPPGNR 222

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+ 
Sbjct: 223 LRVALTGLTMAERFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMG 282

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VLNRS+A  G YP +
Sbjct: 283 VLQERI--TSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATVVLNRSIASMGLYPAI 340

Query: 352 DPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           DPL S SR  D      E   +   +   + R++E +DI  I G
Sbjct: 341 DPLDSTSRQLDPLVVGQEHYDIARGVQGTLQRYKELKDIIAILG 384


>gi|159028802|emb|CAO89973.1| atpD [Microcystis aeruginosa PCC 7806]
          Length = 482

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 164/323 (50%), Gaps = 16/323 (4%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+V       +    C  GR+ N LG+P+D    +   + S  I    P  ++ +     
Sbjct: 79  DIVDTGAAISVPVGKCTLGRIFNVLGEPVDEKGPVNVTETS-PIHRPAPKLVDLEVTPTV 137

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE 201
           F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +S+ G   ER RE
Sbjct: 138 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 197

Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
                 E IE  +   DN + S   +V    +E P  R    L+A+T+AEYF      +V
Sbjct: 198 GNDLYNEMIESKVINADNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDV 257

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +
Sbjct: 258 LLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 315

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +       DE   
Sbjct: 316 VYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQADIVGDEHYG 375

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
              ++   + R++E +DI  I G
Sbjct: 376 TARAVQSTLQRYKELQDIIAILG 398


>gi|46909241|gb|AAT06138.1| ATP synthase beta subunit [Encope michelini]
          Length = 427

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 149/277 (53%), Gaps = 24/277 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR++N +G+PID      +G +  E    I ++ P  +     ++   TGI+V+D+  P
Sbjct: 64  LGRIMNVIGEPIDE-----RGPIPTEKRAAIHAEAPEFVEMSVAQEILVTGIKVVDLLAP 118

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  
Sbjct: 119 YAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGG 177

Query: 209 --YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
              L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 178 VISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 237

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 238 GSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAP 295

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +  + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 296 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332


>gi|326387009|ref|ZP_08208619.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208190|gb|EGD58997.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 481

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 20/276 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PID +  +G  D+   I +K P  + +        TGI+VID+  P   G
Sbjct: 89  LGRILNVVGDPIDDNGPVG-ADMFAPIHAKAPEFIEQSTEAAILVTGIKVIDLLAPYAKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   ++L   +    
Sbjct: 148 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 207

Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                     K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  
Sbjct: 208 AEGNATSDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++ +L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 268 AGSEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTTKGSITSVQAIYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD    L+RS+AE G YP VDPL S SR+
Sbjct: 326 PAASFAHLDATTTLSRSIAELGIYPAVDPLDSTSRV 361


>gi|312892092|ref|ZP_07751592.1| ATP synthase F1 subcomplex beta subunit [Mucilaginibacter paludis
           DSM 18603]
 gi|311295464|gb|EFQ72633.1| ATP synthase F1 subcomplex beta subunit [Mucilaginibacter paludis
           DSM 18603]
          Length = 501

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 164/330 (49%), Gaps = 42/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR++N +G+ IDG D L        I +K PP  +    E +   TGI+VID+  P   G
Sbjct: 89  GRLLNVVGQAIDGIDQL-DNSAGAPIHAK-PPRFDELSTETEVLFTGIKVIDLIEPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +REFIE  +   G
Sbjct: 147 GKIGLFGGAGVGKTVLIMELVNNIAKAYAGLSVFAGVGERTREGNDLLREFIESNVINYG 206

Query: 212 DNLK---------------------KSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D  K                     K+ +V    +E P  R    L+ +T+AEY+     
Sbjct: 207 DAFKHSMEEGGWDLSVVDKEKLKESKATLVFGQMNEPPGARARVALSGLTVAEYYRDGDG 266

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 267 EGQGKDILFFVDNIFRFTQAGAEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKRG 324

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R +AE G YP VDPL S SR+   A 
Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTSLSRKIAELGIYPAVDPLDSTSRILSAAI 384

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  ++ R++E +DI  I G
Sbjct: 385 LGDEHYNTAQRVKEILQRYKELQDIIAILG 414


>gi|254486561|ref|ZP_05099766.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101]
 gi|214043430|gb|EEB84068.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101]
          Length = 479

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+ ID    +   +    I +  P    +    +  +TGI+VID+  P  
Sbjct: 89  ATLGRIMNVVGEAIDEKGEIASAE-RRSIHADAPEFAEQSTSSEVLETGIKVIDLLAPYA 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 148 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNV 205

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              D+L+KS V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 206 INPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V  D+  DP  
Sbjct: 266 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKAGSITSVQAVYVPADDLTDPAP 323

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+RS++E+G YP VDPL S SRL D +   +E   V+  +  ++ R++
Sbjct: 324 ATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPSIVGEEHYNVARDVQGVLQRYK 383

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 384 SLQDIIAILG 393


>gi|146419503|ref|XP_001485713.1| ATP synthase beta chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
          Length = 489

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 164/306 (53%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 104 LGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 162

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  N
Sbjct: 163 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 220

Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           L+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 221 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEV 280

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 281 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 338

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D +   +E   + S++   +  ++  +D
Sbjct: 339 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVASNVQQTLQAYKSLQD 398

Query: 389 IRLIGG 394
           I  I G
Sbjct: 399 IIAILG 404


>gi|42525218|ref|NP_970598.1| F0F1 ATP synthase subunit beta [Bdellovibrio bacteriovorus HD100]
 gi|81829096|sp|Q6MGM7|ATPB_BDEBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|39577429|emb|CAE81252.1| ATP synthase beta chain [Bdellovibrio bacteriovorus HD100]
          Length = 468

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 13/301 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+IN +G+PID    +G  +   +  I    P   ++        TGI+V+D+  P  
Sbjct: 90  LGRIINVVGEPID---EMGPVNAKEQWGIHRTAPKFEDQATAAAMLMTGIKVVDLLAPYA 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+    R+   +     + + VGER RE  +  ++      L 
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLWQEMKQSGVLA 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +  +VL  +D+I RF  +  E++   G
Sbjct: 207 KTSLVFGQMNEPPGARARVALTGLTVAEYFRDVENQDVLFFVDNIFRFTQAGAEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D++ DP   +  + LD 
Sbjct: 267 RIPSAVGYQPTLATEMGTLQERI--TSTKKGSITSVQAVYVPADDYTDPAPATTFTHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L+R +A    +P V PL S SRL D     +E  K    +  L+ R  E +DI  I 
Sbjct: 325 TTNLDRDIAAMAIFPAVHPLTSTSRLLDPTVIGEEHYKCARDVQALLQRNRELQDIIAIL 384

Query: 394 G 394
           G
Sbjct: 385 G 385


>gi|296119532|ref|ZP_06838090.1| ATP synthase F1, beta subunit [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967415|gb|EFG80682.1| ATP synthase F1, beta subunit [Corynebacterium ammoniagenes DSM
           20306]
          Length = 481

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 168/299 (56%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D +  LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L+R++A +G YP V+PL S SR+ + +   +    V+  + +++ + +E +DI  I G
Sbjct: 339 ELDRAIASKGIYPAVNPLTSTSRILEPSIVGERHYAVAQRVINILQKNKELQDIIAILG 397


>gi|156619211|gb|ABU88284.1| ATP synthase CF1 beta subunit [Chlamydomonas moewusii]
          Length = 508

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   D ++ I  K P  ++       F+TGI+V+D+  P   G
Sbjct: 124 LGRIFNVLGEPVDNMGPVKVED-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 182

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 183 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 242

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 243 NLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 300

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 301 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 358

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   +K  +   ++   + R++E
Sbjct: 359 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGDKHYQTAQNVKKTLQRYKE 417

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 418 LQDIIAILG 426


>gi|256380129|ref|YP_003103789.1| F0F1 ATP synthase subunit beta [Actinosynnema mirum DSM 43827]
 gi|255924432|gb|ACU39943.1| ATP synthase F1, beta subunit [Actinosynnema mirum DSM 43827]
          Length = 478

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 162/302 (53%), Gaps = 17/302 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D    LG+      I  K P     +   +  +TGI+VID+ TP   G 
Sbjct: 100 GHVFNALGDCLD-SPGLGRDGEQWGIHRKAPSFDQLEGKTEILETGIKVIDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-----LGDNL 214
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + + +      LGD  
Sbjct: 159 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLLLEMEEMGVLGD-- 216

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
             + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  
Sbjct: 217 --TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLL 274

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +  +  +IT++ ++ V  D++ DP   +  + LD
Sbjct: 275 GRMPSAVGYQPTLADEMGELQERITSTRGK--SITSLQAIYVPADDYTDPAPATTFAHLD 332

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
               L+R ++++G YP VDPL+S SR+ + +   +E  ++   +  ++ +++E +DI  I
Sbjct: 333 ATTELSRPISQKGIYPAVDPLSSSSRILEPSIVGEEHYRVAQEVKRILQKYKELQDIIAI 392

Query: 393 GG 394
            G
Sbjct: 393 LG 394


>gi|108773085|ref|YP_635994.1| ATP synthase CF1 beta subunit [Scenedesmus obliquus]
 gi|118573743|sp|Q1KVT0|ATPB_SCEOB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|88696651|gb|ABD48277.1| CF1 beta subunit of ATP synthase [Scenedesmus obliquus]
          Length = 480

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 160/310 (51%), Gaps = 26/310 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  K + S+ I    P  ++       F+TGI+V+D+  P   
Sbjct: 97  GRIFNVLGEPVD---NLGPVKNEESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRR 153

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E
Sbjct: 154 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 213

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  + 
Sbjct: 214 KNLIDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAG 271

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 272 AEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 329

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   EK      S+   + R++
Sbjct: 330 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEKHYGCAQSVKRTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|260584616|ref|ZP_05852362.1| ATP synthase F1, beta subunit [Granulicatella elegans ATCC 700633]
 gi|260157639|gb|EEW92709.1| ATP synthase F1, beta subunit [Granulicatella elegans ATCC 700633]
          Length = 480

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 151/299 (50%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG  ID  +   +     EI    P         +  +TGI+VID+  P   G
Sbjct: 97  LGRVFNVLGDTIDLGEKFPEDFRRDEIHKPAPKFEQLSSQYEILQTGIKVIDLLAPYLKG 156

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KS 217
            +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   +     +  K+
Sbjct: 157 GKIGLFGGAGVGKTVLIQELIHNIAEELGGISVFTGVGERTREGNDLYHEMQDSGVSAKT 216

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAE+F   +  +VLL +D+I RF  +  E++   G +
Sbjct: 217 AMVFGQMNEPPGARMRVALTGLTIAEHFRDEQKQDVLLFIDNIYRFTQAGSEVSALLGRM 276

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  S  + G+IT++ ++ V  D++ DP   +  + LD   
Sbjct: 277 PSAVGYQPTLATEMGQLQERI--SSTKDGSITSIQAIYVPADDYTDPAPATTFAHLDATT 334

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L R L E+G YP VDPLAS S  L       +  ++   +  ++ R+ E +DI  I G
Sbjct: 335 NLERRLTEQGIYPAVDPLASTSSALTPDIVGEEHYEVAMKVQQMLQRYRELQDIIAILG 393


>gi|119350445|gb|ABL63173.1| AtpB [Ankyra judayi]
          Length = 392

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   D S+ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNMGPVNN-DESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE-------VRE---FIEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE       +RE    +E  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMRESGVIVEKN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    L A+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALPALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E 
Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|93007151|ref|YP_581588.1| F0F1 ATP synthase subunit beta [Psychrobacter cryohalolentis K5]
 gi|118573727|sp|Q1Q899|ATPB_PSYCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|92394829|gb|ABE76104.1| ATP synthase F1, beta subunit [Psychrobacter cryohalolentis K5]
          Length = 477

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 28/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID +  + + D    I  + P    +    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEEGPV-QADERWSIHREAPSYAEQSNSTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF-----------IE 207
            ++G+F G+G+GK+  +     +       +S+   VGER RE  +F            E
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEAGVVNTE 201

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDSIT 260
           D+   +  K  +V    +E P  R    L+ +T+AEYF       + KG +VLL +D+I 
Sbjct: 202 DF---SKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVDNIY 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 259 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGMLQERI--TSTQSGSITSVQAVYVPADDL 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     +E   V+  +  +
Sbjct: 317 TDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYNVARGVQEV 376

Query: 380 IHRFEETRDIRLIGG 394
           + R++E +DI  I G
Sbjct: 377 LQRYKELKDIIAILG 391


>gi|302205988|gb|ADL10330.1| F0F1 ATP synthase subunit beta [Corynebacterium pseudotuberculosis
           C231]
          Length = 481

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +  LG+      I    PP    +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD    
Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A +G YP V+PL S SR+ +     +   ++   + H++ + +E +DI  I G
Sbjct: 340 LDRTIASKGIYPAVNPLTSTSRILEPGVVGERHYEVAQRVIHILQKNKELQDIIAILG 397


>gi|241761493|ref|ZP_04759581.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374400|gb|EER63897.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 484

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 21/319 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR++N +G+P+D    +G    +M I +  PP   +        TGI+VID
Sbjct: 83  RVPVGPETLGRIMNVVGRPVDERGPIGSKQ-TMPIHADAPPFTEQSTDTAILTTGIKVID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206
           +  P   G ++G+F G+G+GK+ L+     +         + + VGER RE      EF+
Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFL 201

Query: 207 E------DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
           E      D  G+ +    K  +V    +E P  R    L+ +T+AEYF   +G +VL  +
Sbjct: 202 EAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFV 261

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  +KG+IT+V ++ V 
Sbjct: 262 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKKGSITSVQAIYVP 319

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+R+++E G YP VDPL S SR  +     DE  +    
Sbjct: 320 ADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPRIVGDEHYQTARD 379

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 380 VQEILQHYKNLQDIIAILG 398


>gi|71082935|ref|YP_265654.1| F0F1 ATP synthase subunit beta [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762641|ref|ZP_01264606.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|118573715|sp|Q4FP38|ATPB_PELUB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71062048|gb|AAZ21051.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91718443|gb|EAS85093.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 472

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 23/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR+IN +G+PID      KG++  +    + +  P  + Q  E     TGI+V+D+  P 
Sbjct: 85  GRIINVIGEPIDE-----KGEVKTKEKWPIHRAAPEFSDQSTETEILVTGIKVVDLLAPY 139

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +   + 
Sbjct: 140 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMIDSGVI 199

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  K+ +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +  
Sbjct: 200 KPEGPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLFFVDNIFRFTQAGS 259

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +
Sbjct: 260 EVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITSVQAIYVPADDLTDPAPAT 317

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +AE G YP VDPL S SR+ D     DE  ++   +  ++  ++  
Sbjct: 318 SFAHLDATTVLSRQIAEIGIYPAVDPLDSTSRILDPRIVGDEHYRVAREVQKILQTYKSL 377

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 378 QDIIAILG 385


>gi|23503595|dbj|BAC20394.1| ATP synthase beta-subunit [Chloromonas asteroidea]
 gi|23503599|dbj|BAC20396.1| ATP synthase beta-subunit [Chlamydomonas mutabilis]
          Length = 376

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAETTLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKDGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYSVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 321 RYKELQDIIAILG 333


>gi|215400698|ref|YP_002327459.1| ATP synthase CF1 subunit b [Vaucheria litorea]
 gi|194441148|gb|ACF70876.1| ATP synthase CF1 subunit b [Vaucheria litorea]
          Length = 473

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG+  G  ++ I  + P   + +     F+TGI+V+D+  P
Sbjct: 88  VTLGRIFNILGEPVD---NLGEISGAPTLPIHREAPSFTDLETTPSIFETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G      RE  + Y+       
Sbjct: 145 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVEERTREGNDLYMEMKESGV 204

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +NL +S V  V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +
Sbjct: 205 IQANNLTESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDINNQDVLLFIDNIFRFVQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP  
Sbjct: 265 GSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTTQGSITSIQAVYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +  ++    E  K   ++   + R++
Sbjct: 323 ATTFAHLDTTTVLSRGLAAKGIYPAVDPLDSTSTMLQESIVGTEHYKTAQAVKETLQRYK 382

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 383 ELQDIIAILG 392


>gi|301632657|ref|XP_002945398.1| PREDICTED: ATP synthase subunit beta-like [Xenopus (Silurana)
           tropicalis]
          Length = 469

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    + +  L   I  K P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMDVLGNPIDERGPVDQ-TLRASIHRKAPAYDELSPSQELLETGIKVIDLVCPFA 141

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +       
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 200

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
             +NL +S V  V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  
Sbjct: 201 NLENLGESKVSMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 260

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 261 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D     +E  ++   +   + R++E 
Sbjct: 319 TFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGEEHYRVARDVQGTLQRYKEL 378

Query: 387 RDI 389
           RDI
Sbjct: 379 RDI 381


>gi|159466892|ref|XP_001691632.1| beta subunit of mitochondrial ATP synthase [Chlamydomonas
           reinhardtii]
 gi|584796|sp|P38482|ATPBM_CHLRE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|18123|emb|CAA43808.1| H(+)-transporting ATP synthase [Chlamydomonas reinhardtii]
 gi|158278978|gb|EDP04740.1| beta subunit of mitochondrial ATP synthase [Chlamydomonas
           reinhardtii]
          Length = 574

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +   ++   I  + P    +   ++   TGI+V+D+  P   G 
Sbjct: 119 GRIMNVIGEPVDEQGPIECSEV-WSIHREAPEFTEQSTEQEILVTGIKVVDLLAPYQRGG 177

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE     LGD
Sbjct: 178 KIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGD 237

Query: 213 NL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 238 KRGESKCTLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFVDNIFRFTQANSEV 297

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  
Sbjct: 298 SALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTF 355

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE G YP VDPL S SR+ +     A+   +   +  ++  ++  +D
Sbjct: 356 AHLDATTVLSRSIAELGIYPAVDPLDSTSRMLNPNIIGAEHYNIARGVQKVLQDYKNLQD 415

Query: 389 IRLIGG 394
           I  I G
Sbjct: 416 IIAILG 421


>gi|330813464|ref|YP_004357703.1| ATP synthase beta chain [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486559|gb|AEA80964.1| ATP synthase beta chain [Candidatus Pelagibacter sp. IMCC9063]
          Length = 474

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 166/330 (50%), Gaps = 18/330 (5%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  GD V + G   R+       GR++N +G+PID    + K   +  I    P  + 
Sbjct: 62  EGLKRGDKVTNTGSSIRVPVGPETLGRIMNVIGEPIDERGPI-KTKENWPIHRAAPSFVE 120

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIIS 193
           +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   
Sbjct: 121 QSTETEVLVTGIKVVDLLAPYSRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 180

Query: 194 LVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245
            VGER RE  +   + +   +        K+ +V    +E P  R    L+ +T+AEYF 
Sbjct: 181 -VGERTREGNDLYHEMMESGVIKLDGPGSKAALVYGQMNEPPGARARVALSGLTVAEYFR 239

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 240 DQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 298 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRI 357

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE  ++   +  ++  ++  +DI  I G
Sbjct: 358 VGDEHYRVAREVQEILQTYKSLQDIIAILG 387


>gi|163869185|ref|YP_001610437.1| F0F1 ATP synthase subunit beta [Bartonella tribocorum CIP 105476]
 gi|190358258|sp|A9IYW6|ATPB_BART1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161018884|emb|CAK02442.1| ATP synthase beta chain [Bartonella tribocorum CIP 105476]
          Length = 541

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 160/313 (51%), Gaps = 22/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +     +  I  + P  + +  V +   TGI+V+D+  P  
Sbjct: 147 ATLGRIMNVIGEPVDNVGPIASTK-TRSIHQEAPEYVEQSTVSEILVTGIKVVDLLAPYS 205

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  + 
Sbjct: 206 KGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESGVN 264

Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            N K         K  +V    +E P  R    L+ +TIAE F  +G +VL  +D+I RF
Sbjct: 265 VNPKENNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRF 324

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  D
Sbjct: 325 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKIGSITSVQAIYVPADDLTD 382

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381
           P   +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ 
Sbjct: 383 PAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQ 442

Query: 382 RFEETRDIRLIGG 394
           R+   +DI  I G
Sbjct: 443 RYRALQDIIAILG 455


>gi|71066578|ref|YP_265305.1| F0F1 ATP synthase subunit beta [Psychrobacter arcticus 273-4]
 gi|118573726|sp|Q4FQ37|ATPB_PSYA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71039563|gb|AAZ19871.1| ATP synthase F1, beta subunit [Psychrobacter arcticus 273-4]
          Length = 477

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 28/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID +  + + D    I  + P    +    +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEEGPV-EADERWSIHREAPSYAEQSNSTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF-----------IE 207
            ++G+F G+G+GK+  +     +       +S+   VGER RE  +F            E
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEAGVVNTE 201

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDSIT 260
           D+   +  K  +V    +E P  R    L+ +T+AEYF       + KG +VLL +D+I 
Sbjct: 202 DF---SKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVDNIY 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 259 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGMLQERI--TSTQSGSITSVQAVYVPADDL 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     +E   V+  +  +
Sbjct: 317 TDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYNVARGVQEV 376

Query: 380 IHRFEETRDIRLIGG 394
           + R++E +DI  I G
Sbjct: 377 LQRYKELKDIIAILG 391


>gi|84500100|ref|ZP_00998366.1| ATP synthase subunit B [Oceanicola batsensis HTCC2597]
 gi|84392034|gb|EAQ04302.1| ATP synthase subunit B [Oceanicola batsensis HTCC2597]
          Length = 467

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 25/332 (7%)

Query: 78  GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           G+E++  D     G   +       GR++N +G+P+D    + + D    I +  P   +
Sbjct: 60  GQEVTDTD-----GPISVPVGTATLGRILNVIGEPVDEKGPV-EADEFRPIHAPAPDFAD 113

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----II 192
           +    +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +    KV     + 
Sbjct: 114 QATEAEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGLSVF 171

Query: 193 SLVGERGRE----VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE      E IE      DNL  S   +V    +E P  R    LT +T+AE 
Sbjct: 172 AGVGERTREGNDLYHEMIESGVLTPDNLPDSKIALVYGQMNEPPGARARIALTGLTLAEQ 231

Query: 245 F-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  + G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +
Sbjct: 232 FRDATGTDVLFFVDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTK 289

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D 
Sbjct: 290 NGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDP 349

Query: 364 AWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
               +E   V+  +  ++ R++  +DI  I G
Sbjct: 350 QIVGEEHYQVARDVQGILQRYKSLQDIIAILG 381


>gi|325266848|ref|ZP_08133519.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC
           33394]
 gi|324981589|gb|EGC17230.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC
           33394]
          Length = 465

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG P+D    +G  D +  I    P         +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPVDEAGPIGS-DQTRAIHQPAPKFDELSSTTELLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +++AE+F      + KG +VL  +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E R
Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|302330541|gb|ADL20735.1| F0F1 ATP synthase subunit beta [Corynebacterium pseudotuberculosis
           1002]
 gi|308276223|gb|ADO26122.1| F0F1 ATP synthase subunit beta [Corynebacterium pseudotuberculosis
           I19]
          Length = 481

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +  LG+      I    PP    +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD    
Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++A +G YP V+PL S SR+ +     +   ++   + H++ + +E +DI  I G
Sbjct: 340 LDRAIASKGIYPAVNPLTSTSRILEPGVVGERHYEVAQRVIHILQKNKELQDIIAILG 397


>gi|296393129|ref|YP_003658013.1| ATP synthase F1 subunit beta [Segniliparus rotundus DSM 44985]
 gi|296180276|gb|ADG97182.1| ATP synthase F1, beta subunit [Segniliparus rotundus DSM 44985]
          Length = 482

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG   D  D+ G G D     + + PPA ++ +   +  +TGI+VID+ TP   
Sbjct: 104 GHVFNALG---DCLDTPGAGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 160

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ 
Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLKLEMEEMGVLQD 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 281 MPSAVGYQPTLADEMGQLQERI--TSTRGRSITSLQAIYVPADDYTDPAPATTFAHLDAT 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+R +++ G YP VDPL S SR+ + +   DE  ++ + +  ++ +++E +DI  I G
Sbjct: 339 TELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 398


>gi|14020807|dbj|BAB47548.1| ATP synthase beta-subunit [Eudorina elegans]
          Length = 376

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYESAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|4519336|dbj|BAA75583.1| ATP synthase beta-subunit [Pandorina unicocca]
          Length = 376

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPIDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFVDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|24460025|dbj|BAC22613.1| F1-ATPase beta subunit [Synechococcus sp. PCC 7002]
          Length = 483

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +G  + S  I    P           F+TGI+V+D+ TP   G
Sbjct: 96  LGRIFNVLGEPVDEKGEVGAEETS-PIHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRG 154

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL--GD 212
            +IG+F G+G+GK+ ++     +   +   +S+   VGER RE      E IE  +   D
Sbjct: 155 GKIGLFGGAGVGKTVIMMELINNIATNHGGVSVFAGVGERTREGNDLYNEMIESGVINPD 214

Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL  S   +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 215 NLNDSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEV 274

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 275 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVLADDLTDPAPATTF 332

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388
           + LDG  VL+R+LA +G YP VDPL S S +   +    D      ++   + R++E +D
Sbjct: 333 AHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPSIVGEDHYNTARAVQSTLQRYKELQD 392

Query: 389 IRLIGG 394
           I  I G
Sbjct: 393 IIAILG 398


>gi|296138982|ref|YP_003646225.1| ATP synthase F1 subunit beta [Tsukamurella paurometabola DSM 20162]
 gi|296027116|gb|ADG77886.1| ATP synthase F1, beta subunit [Tsukamurella paurometabola DSM
           20162]
          Length = 481

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D    LG+      I  K PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-TPGLGRDGEQWGIHRK-PPAFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGTRMRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGELQERITSTKGR--SITSLQAIYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +++ G YP VDPL S SR+ + +   DE  ++ + +  ++ +++E +DI  I G
Sbjct: 339 ELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 397


>gi|23503641|dbj|BAC20417.1| ATP synthase beta-subunit [Characiochloris sasae]
          Length = 376

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + ++ I  + P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVEANETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R+
Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSCAQSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|50424093|ref|XP_460631.1| DEHA2F06226p [Debaryomyces hansenii CBS767]
 gi|49656300|emb|CAG88959.1| DEHA2F06226p [Debaryomyces hansenii]
          Length = 503

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + K      I +  P  + +    +  +TGI+V+D+  P   G
Sbjct: 117 LGRIINVIGEPIDERGPI-KTKQKNPIHADPPSFVEQSTSSEVLETGIKVVDLLAPYARG 175

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 176 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAG-VGERTREGNDLYREMQETGVINL 234

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 235 EGDS--KVSLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIYRFTQAGSE 292

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 293 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 350

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D A    E   + S +   +  ++  +
Sbjct: 351 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDIAVVGKEHYDVASGVQQTLQAYKSLQ 410

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 411 DIIAILG 417


>gi|46909269|gb|AAT06152.1| ATP synthase beta subunit [Priapulus caudatus]
          Length = 427

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 149/277 (53%), Gaps = 24/277 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR++N +G+PID      +G ++ +    I ++ P        ++  +TGI+V+D+  P
Sbjct: 64  LGRIMNVIGEPIDE-----RGPITTKHKASIHAEAPEFAEMSTEQEILETGIKVVDLLAP 118

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  
Sbjct: 119 YVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESG 177

Query: 209 --YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
              L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 178 VISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQA 237

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP  
Sbjct: 238 GSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAP 295

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +  + LD   VL+R +AE G YP VDPL S+SR+ D
Sbjct: 296 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMD 332


>gi|68536420|ref|YP_251125.1| F0F1 ATP synthase subunit beta [Corynebacterium jeikeium K411]
 gi|260577553|ref|ZP_05845492.1| ATP synthase F1, beta subunit [Corynebacterium jeikeium ATCC 43734]
 gi|118573523|sp|Q4JUK0|ATPB_CORJK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|68264019|emb|CAI37507.1| ATP synthase beta chain [Corynebacterium jeikeium K411]
 gi|258604277|gb|EEW17515.1| ATP synthase F1, beta subunit [Corynebacterium jeikeium ATCC 43734]
          Length = 481

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D +  LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+RS+A +G YP V+PL S SR+ +     +   ++   + H++ + +E +DI  I G
Sbjct: 339 ELDRSIASKGIYPAVNPLTSTSRILEPGIVGERHYEVAQRVIHILQKNKELQDIIAILG 397


>gi|293189734|ref|ZP_06608450.1| ATP synthase F1, beta subunit [Actinomyces odontolyticus F0309]
 gi|292821324|gb|EFF80267.1| ATP synthase F1, beta subunit [Actinomyces odontolyticus F0309]
          Length = 482

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++     K F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186

Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D   +S+   VGER RE  + I E        K+ +V    DE P  R    LT +T+AE
Sbjct: 187 DHGGVSVFAGVGERTREGNDLIGEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 246

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 247 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGLLQERI--TSA 304

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPLAS SR+ D
Sbjct: 305 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASTSRILD 364

Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            A    E   V++ +  ++ + +E +DI  I G
Sbjct: 365 PALVGREHYDVATHVKAILQKNKELQDIIAILG 397


>gi|254452564|ref|ZP_05066001.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 238]
 gi|198266970|gb|EDY91240.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 238]
          Length = 474

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G P+D    + K D    I  + P   ++    +   TGI+VID+  P  
Sbjct: 84  ATLGRILNVTGDPVDEKGPV-KTDQRRSIHGEAPKFEDQSTATEILVTGIKVIDLLAPYT 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE  +   + +    
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGV 200

Query: 212 ---DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
              DNL++S   +V    +E P  R    LT +++AE F    G +VL  +D+I RF  +
Sbjct: 201 INLDNLEESKIALVYGQMNEPPGARMRIALTGLSLAEQFRDDSGSDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERIASTRG--GSITSVQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+++E+G YP VDPL S SRL D     +E  K+ + +  ++ R++
Sbjct: 319 ATSFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGEEHYKVATDVQQILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|325117227|emb|CBZ52779.1| ATP synthase subunit beta, related [Neospora caninum Liverpool]
          Length = 561

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 29/315 (9%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160
           GR++N +G+P+D    +  K   S+    +  P    Q  E G  +TGI+V+D+  P   
Sbjct: 165 GRIMNVIGEPVDECGPVPAKKTYSIH---RAAPLFADQSTEPGLLQTGIKVVDLLAPYAK 221

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK T+L M   ++  +K     + + VGER RE  +   + +   +  
Sbjct: 222 GGKIGLFGGAGVGK-TVLIMELINNVANKHGGFSVFAGVGERTREGNDLYHEMMTTGVIK 280

Query: 215 -------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                         K+ +V    +E P  R    LTA+++AEYF   +G +VLL +D+I 
Sbjct: 281 RKKLEDGKFDFTGSKAALVYGQMNEPPGARARVALTALSVAEYFRDEQGQDVLLFIDNIY 340

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ ++L +L ERI  +  +KG+IT+V +V V  D+ 
Sbjct: 341 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAVYVPADDL 398

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR LA +    +      +   L
Sbjct: 399 TDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLAPEIVGQEHYDTARATQKL 458

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 459 LQDYKSLQDIIAILG 473


>gi|154509262|ref|ZP_02044904.1| hypothetical protein ACTODO_01787 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798896|gb|EDN81316.1| hypothetical protein ACTODO_01787 [Actinomyces odontolyticus ATCC
           17982]
          Length = 482

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++     K F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186

Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D   +S+   VGER RE  + I E        K+ +V    DE P  R    LT +T+AE
Sbjct: 187 DHGGVSVFAGVGERTREGNDLIGEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 246

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 247 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGLLQERI--TSA 304

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPLAS SR+ D
Sbjct: 305 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASTSRILD 364

Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            A    E   V++ +  ++ + +E +DI  I G
Sbjct: 365 PALVGREHYDVATHVKAILQKNKELQDIIAILG 397


>gi|32476317|ref|NP_869311.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica SH 1]
 gi|81835208|sp|Q7UFB5|ATPB_RHOBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|32446862|emb|CAD78768.1| H+-transporting ATP synthase beta chain [Rhodopirellula baltica SH
           1]
          Length = 479

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+PID    + + D    I  + PP        + F+TGI+V+D+ TP   G 
Sbjct: 94  GRVFNVLGQPIDKRGDV-QADDYWPIHRQAPPVNELSTNTELFETGIKVVDLLTPFVRGG 152

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213
           + G+F G+G+GK+ +L+ + AR  S      + + VGER RE      E  E  +G    
Sbjct: 153 KAGLFGGAGLGKTVILTELIARIASSHGGYSVFAGVGERTREGTDLWLEMQETEIGSTGR 212

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             ++++ +V    +E P  R    L+A+T+AEYF  + G + LL +D+I RF+ +  E++
Sbjct: 213 NVIEQTCMVFGQMNEPPGSRLRVALSALTMAEYFRDTTGADTLLFVDNIFRFSQAGSEVS 272

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G IT+V +V V  D+  DP   +   
Sbjct: 273 ALLGRMPSAVGYQPTLATEMGALQERI--TSTKQGAITSVQAVYVPADDPTDPAPATAFG 330

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  I L RS++E+G YP +DPLAS SR+ D  +  D    ++  +  ++ R+ E +DI
Sbjct: 331 QLDAFIYLERSISEKGIYPAIDPLASNSRILDPQYVGDRHYTIARRVQTILQRYRELQDI 390

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     GVD + ++    VH+   I  FL Q
Sbjct: 391 IAI----LGVDELSEEDKTIVHRARRIERFLSQ 419


>gi|327327363|gb|EGE69139.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL103PA1]
          Length = 489

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           G V N  G  ++ D S+ +      I  + PPA +    E +  +TGI+V+D+ TP   G
Sbjct: 109 GHVWNVTGDVLNADPSISEVTERWPI-HRDPPAFDDLEPETEMLETGIKVLDLLTPYVKG 167

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +      LK +
Sbjct: 168 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDT 227

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T  G +
Sbjct: 228 ALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRM 287

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + LD   
Sbjct: 288 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATT 345

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI  I G
Sbjct: 346 ELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILG 404


>gi|210634566|ref|ZP_03298162.1| hypothetical protein COLSTE_02084 [Collinsella stercoris DSM 13279]
 gi|210158751|gb|EEA89722.1| hypothetical protein COLSTE_02084 [Collinsella stercoris DSM 13279]
          Length = 477

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 169/326 (51%), Gaps = 15/326 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+P+DG + + + D    I    P         + F+TGI+ +D+  P   G 
Sbjct: 101 GRIWNVMGEPVDGKE-MPEVDAYYPIHHPAPAFDQLTTKTEIFETGIKAVDLLEPYIRGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ L+     +   +     + + VGER RE  + ++E      + K+ 
Sbjct: 160 KTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSESGVIDKTC 219

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G +P 
Sbjct: 220 LVYGQMNEPPGARLRIGLAGLTEAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGRMPS 279

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 280 AVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTVL 337

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRP 397
           +RS++  G +P +DPLAS S   D +   +E   V+  +  ++  + + +DI  I     
Sbjct: 338 SRSISSLGLFPAIDPLASTSDALDPSIVGEEHYRVAVRVQEILQEYSDLQDIIAI----L 393

Query: 398 GVDLILDK---AVHQVPIIYDFLKQS 420
           G+D + D+    V++   I  FL QS
Sbjct: 394 GMDELSDEQRLTVNRARKIQQFLSQS 419


>gi|224004780|ref|XP_002296041.1| F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335]
 gi|209586073|gb|ACI64758.1| F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335]
          Length = 500

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 159/314 (50%), Gaps = 24/314 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+IN +G+P+D    +   D  ME    +    P    + + ++   TGI+V+D+  P
Sbjct: 107 LGRIINVIGEPVDEKGPIFT-DKKMEKFAPLHRSAPTFTEQGKSQEILVTGIKVVDLLAP 165

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE--- 207
              G +IG+F G+G+GK+ ++     +   +     + + VGER RE      E IE   
Sbjct: 166 YAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGV 225

Query: 208 -----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                D       K+ +V    +E P  R    LT + IAEYF   +G +VLL +D+I R
Sbjct: 226 IKINKDTGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFR 285

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  
Sbjct: 286 FTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERI--TSTAKGSITSVQAVYVPADDLT 343

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LI 380
           DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     D+   V+  T  L+
Sbjct: 344 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMLDPRVIGDKHYQVARATQKLL 403

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 404 QDYKGLQDIIAILG 417


>gi|4519288|dbj|BAA75559.1| ATP synthase beta-subunit [Pleodorina indica]
          Length = 376

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKRTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|157827763|ref|YP_001496827.1| F0F1 ATP synthase subunit beta [Rickettsia bellii OSU 85-389]
 gi|166201730|sp|A8GY40|ATPB_RICB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157803067|gb|ABV79790.1| F0F1 ATP synthase subunit beta [Rickettsia bellii OSU 85-389]
          Length = 473

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 163/307 (53%), Gaps = 19/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+PIDG   + KG  S+  + K  P+  +Q  ++    TGI+V+D+  P   G
Sbjct: 89  GRIMNVVGEPIDGKGKI-KGS-SISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD---NLK 215
            +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +     NL+
Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLE 206

Query: 216 -----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268
                K  +V    +E P  R    LT +T+AE F   ++G +VL  +D+I RF  +  E
Sbjct: 207 EPEKSKVALVYGQMNEPPGARARVALTGLTVAESFRDMNEGQDVLFFVDNIFRFTQAGSE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP   + 
Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATS 324

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD  IVL+R +AE G YP VDPL S S++ D     +E   V+  +  ++  ++  +
Sbjct: 325 FAHLDATIVLSRQIAELGIYPAVDPLDSTSQVLDPMIVGEEHYNVARKVQQILQTYKSLQ 384

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 385 DIIAILG 391


>gi|22266799|gb|AAM94913.1|AF522463_8 subunit beta [Ilyobacter tartaricus]
          Length = 467

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 158/302 (52%), Gaps = 11/302 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
              GR++N LG+ ID  + L   + +   + +  PA   Q  + + F+TGI+VID+  P 
Sbjct: 84  AVLGRILNVLGEAIDQKEELNAEEFAP--IHREAPAFEDQGTDVEIFETGIKVIDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+  ++      L
Sbjct: 142 VKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLFDEMTESGVL 201

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LT +T+AE F  K G +VLL +D+I RF  +  E++   
Sbjct: 202 DKTSLVYGQMNEPPGARLRVALTGLTMAENFRDKEGQDVLLFVDNIFRFTQAGSEVSALL 261

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD
Sbjct: 262 GRMPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLD 319

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392
              VL+R +A  G YP VDPL S S       +  E    +  +  ++ R++E +DI  I
Sbjct: 320 ATTVLSRRIASLGIYPAVDPLDSTSTALQPGVTGHEHYTTAREVQSVLQRYKELQDIIAI 379

Query: 393 GG 394
            G
Sbjct: 380 LG 381


>gi|74185232|dbj|BAE30095.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATNF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|255733360|gb|ACU31112.1| ATP synthase beta subunit [Childia sp. MR-2009]
          Length = 427

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 144/273 (52%), Gaps = 16/273 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    L      + I    P  ++    ++  +TGI+V+D+  P   G
Sbjct: 64  LGRIINVIGEPIDERGPL-NAKKYLPIHQDAPAFVDMSVEQEILETGIKVVDLLAPYSKG 122

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +        L
Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMITGGVISL 181

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 182 KDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDYEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ ++   + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDTGTMQERI--TTTKKGSITSVQAIFVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332


>gi|22651730|gb|AAM26937.1| ATP synthase beta subunit [Drosera regia]
          Length = 494

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G D+V       +   +   GR
Sbjct: 48  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVVDTGTALSVPVGSATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 108 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++     +     
Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGVINEQN 224

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 225 IPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 284

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E +DI
Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDEHYETAQQVKQTLQRYKELQDI 402

Query: 390 RLIGG 394
             I G
Sbjct: 403 IAILG 407


>gi|21956128|dbj|BAC06428.1| ATP synthase beta-subunit [Volvox tertius]
 gi|31414561|dbj|BAC77260.1| beta subunit of ATP synthase [Volvox tertius]
          Length = 376

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|330812735|ref|YP_004357197.1| ATP synthase subunit beta [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380843|gb|AEA72193.1| putative ATP synthase, beta chain [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 458

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 17/336 (5%)

Query: 69  IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  E +  G D++       +       GR+++ LG PID       G +  E
Sbjct: 49  IVRTIAMGSTEGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDE-----AGPIDTE 103

Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    +       +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 104 ERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIR 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +
Sbjct: 164 NIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G++VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 224 TMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 281

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 282 TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 341

Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             D      E       + +++ R++E +DI  I G
Sbjct: 342 QLDPNVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377


>gi|296109136|ref|YP_003616085.1| ATP synthase, B subunit [Methanocaldococcus infernus ME]
 gi|295433950|gb|ADG13121.1| ATP synthase, B subunit [Methanocaldococcus infernus ME]
          Length = 464

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 167/332 (50%), Gaps = 16/332 (4%)

Query: 59  LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           +GQV+  R  L +V +     G  +    + F     +I  S    GR+ N  G+PIDG 
Sbjct: 44  MGQVLEAREGLAVVQVFEGTTGLNVDKTRVRFTGKTAKIGVSTEMLGRIFNGRGQPIDGG 103

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   ++ ++I       ++R+      +TGI  ID    L  GQ++ +F+GSG+  + 
Sbjct: 104 PEIVP-EMELDINGYPLNPVSRKYPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 162

Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L    AR            V+ + +G    E   F+E++     L+K+VV +  +++  I
Sbjct: 163 LAVQIARQAKVRGEGEKFAVVFAAMGITAEEANFFMEEFRRTGALEKAVVFINLANDPAI 222

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P  A+T+AEY + + D +VL+IL  +T +  ++REI+    E+P  RGYP  +++
Sbjct: 223 ERILTPRMALTVAEYLAFEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMYT 282

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  + + G IT +  + +  D+   PI D    I +G IVL+R L  +G Y
Sbjct: 283 DLATIYERAGRVKGKVGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 342

Query: 349 PPVDPLASVSRLADKAWSA-----DEKKLVSS 375
           PP+D L S+SRLA           D KK+V+ 
Sbjct: 343 PPIDVLPSLSRLAGSGQGPGKTREDHKKVVNQ 374


>gi|41179057|ref|NP_958414.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
 gi|336667|gb|AAA84146.1| ATP synthase beta subunit [Chlamydomonas reinhardtii]
 gi|28269780|tpg|DAA00958.1| TPA_inf: CF1 ATP synthase beta subunit [Chlamydomonas reinhardtii]
 gi|213517439|gb|ACJ50145.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
 gi|217315587|gb|ACK37278.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
 gi|217315589|gb|ACK37279.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
          Length = 491

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 107 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 165

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 166 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 225

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 226 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 342 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|15668389|ref|NP_247185.1| V-type ATP synthase subunit B [Methanocaldococcus jannaschii DSM
           2661]
 gi|2493103|sp|Q57669|VATB_METJA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|1590954|gb|AAB98199.1| H+-transporting ATP synthase, subunit B (atpB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 465

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 18/333 (5%)

Query: 59  LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           +GQV+  R  L +V +     G       + F     +I  S    GR+ N  GKPIDG 
Sbjct: 46  MGQVLEAREGLAVVQVFEGTTGLSTKDTRVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGG 105

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  ++I       ++R+      +TGI  ID    L  GQ++ +F+GSG+  + 
Sbjct: 106 PEIVP-EKELDINGYPLNPVSRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 164

Query: 177 LLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           L +  AR        + F  V+ + +G    E   F+E++     L+++VV +  +D+  
Sbjct: 165 LAAQIARQAKVRGEGEKF-AVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLADDPA 223

Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R + P  A+T+AEY + + D +VL+IL  +T +  ++REI+    E+P  RGYP  ++
Sbjct: 224 IERILTPRIALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMY 283

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++L  + ER G  +   G IT +  + +  D+   PI D    I +G IVL+R L  +G 
Sbjct: 284 TDLATIYERAGRVKGRTGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGI 343

Query: 348 YPPVDPLASVSRLADKAWSA-----DEKKLVSS 375
           YPPVD L S+SRLA           D KK+V+ 
Sbjct: 344 YPPVDVLPSLSRLAGNGQGPGKTREDHKKVVNQ 376


>gi|119350477|gb|ABL63189.1| AtpB [Chlorococcum echinozygotum]
          Length = 390

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 164/325 (50%), Gaps = 23/325 (7%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G+  I P      GR+ N LG+P+D    +   D ++ I  K P  ++       F
Sbjct: 20  VLDTGKPLIVPVGKVTLGRIFNVLGEPVDNMGPVKIED-TLPIHRKAPAFVDLDTRLSIF 78

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202
           +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE 
Sbjct: 79  ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREG 138

Query: 203 REF----------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
            +           +E  L D+  K  +V    +E P       LTA+T+AEYF      +
Sbjct: 139 NDLYTEMKESGVIVEKNLADS--KVALVYGQMNEPPXXXXXVALTALTMAEYFRDINKQD 196

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ 
Sbjct: 197 VLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQ 254

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK 
Sbjct: 255 AVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKH 313

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +   ++   + R++E +DI  I G
Sbjct: 314 YQTAQNVKKTLQRYKELQDIIAILG 338


>gi|332969727|gb|EGK08741.1| ATP synthase F1 sector beta subunit [Kingella kingae ATCC 23330]
          Length = 465

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG P+D    +G  D +  I    P         +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPVDEAGPIGS-DQTRAIHQPAPKFDELSSATELLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +++AE+F      + KG +VL  +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E R
Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQATLQKYKELR 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|292492007|ref|YP_003527446.1| alternate F1F0 ATPase, F1 subunit beta [Nitrosococcus halophilus
           Nc4]
 gi|291580602|gb|ADE15059.1| alternate F1F0 ATPase, F1 subunit beta [Nitrosococcus halophilus
           Nc4]
          Length = 470

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 9/296 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G PID   +L   +  + I     P   R    K F+TGI+ +D+  PL 
Sbjct: 92  ALLGRMLNVFGDPIDNKGTLDASE-RLPIHRTPLPLAQRVTTRKIFETGIKAVDLLAPLE 150

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G + G+F G+G+GK+ L++    +       ISL   +GER RE  E   D      L 
Sbjct: 151 EGGKAGLFGGAGVGKTVLITEMIHNMVGRYQGISLFCGIGERSREAEELYRDMKEAGVLD 210

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
            ++++    +E P  R      A+T+AEYF      NVLL++D+I RF  S  E++   G
Sbjct: 211 NTIMLFGQMNEPPGARFRVGHAALTVAEYFRDIAKRNVLLLIDNIFRFIQSGTEVSGLMG 270

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P   GY  ++ +EL  L ERI  S    G+IT+V +V V  D+  DP A    + L  
Sbjct: 271 KIPSRVGYQPTLGTELAELEERICSSAS--GSITSVQAVYVPADDLTDPSATHTFAHLSA 328

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            IVL+R  A +G YP +DPL S S+ L          K+   +   +  +EE +DI
Sbjct: 329 SIVLSRKKASQGFYPAIDPLQSDSKMLTPGVVGKRHYKVAQEVRRTLAEYEELKDI 384


>gi|126134912|ref|XP_001383980.1| F1F0-ATPase complex, F1 beta subunit [Scheffersomyces stipitis CBS
           6054]
 gi|126091178|gb|ABN65951.1| F1F0-ATPase complex, F1 beta subunit [Scheffersomyces stipitis CBS
           6054]
          Length = 503

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 163/307 (53%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    + +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 117 LGRIINVVGEPIDERGPI-ECKQRNPIHAEPPSFVEQSTAAEVLETGIKVVDLLAPYARG 175

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 176 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 234

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 235 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 292

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 293 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 350

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D A    E   + +++   +  ++  +
Sbjct: 351 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGKEHYDVATNVQQTLQAYKSLQ 410

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 411 DIIAILG 417


>gi|145529528|ref|XP_001450547.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418169|emb|CAK83150.1| unnamed protein product [Paramecium tetraurelia]
          Length = 414

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 158/304 (51%), Gaps = 14/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G PID    + +  +   I  + P  +++    +   TGI+V+D+  P   G 
Sbjct: 113 GRIMNVIGDPIDERGPI-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGG 171

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +   +     
Sbjct: 172 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMVASGVINLSG 231

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
             +  ++    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++  
Sbjct: 232 GSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSAL 291

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ ++L +L ERI  +  +KG+IT+V ++ V  D+  DP   +  + L
Sbjct: 292 LGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 349

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+R+L E G YP VDPL S SR+ D     ++   V+  +  L+  ++  +DI  
Sbjct: 350 DATTVLSRALTELGIYPAVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQDYKSLQDIIC 409

Query: 392 IGGY 395
             GY
Sbjct: 410 HFGY 413


>gi|21956132|dbj|BAC06429.1| ATP synthase beta-subunit [Volvox carteri f. nagariensis]
 gi|116256368|dbj|BAF35215.1| ATP synthase beta subunit [Pleodorina thompsonii]
          Length = 376

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|4519286|dbj|BAA75558.1| ATP synthase beta-subunit [Pleodorina japonica]
 gi|4519340|dbj|BAA75585.1| ATP synthase beta-subunit [Platydorina caudata]
 gi|21956006|dbj|BAC06373.1| ATP synthase beta-subunit [Volvox obversus]
          Length = 376

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|58424949|gb|AAW73986.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 512

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG+PID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 124 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 182

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 183 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 241

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R+  +  
Sbjct: 242 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLAGT 301

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 302 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 359

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  + L+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 360 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 419

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 420 KDIIAILG 427


>gi|319899411|ref|YP_004159508.1| ATP synthase beta chain [Bartonella clarridgeiae 73]
 gi|319403379|emb|CBI76943.1| ATP synthase beta chain [Bartonella clarridgeiae 73]
          Length = 531

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 22/310 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+P+D    +        I  + P  M +    +   TGI+VID+  P   G 
Sbjct: 139 GRIMNVIGEPVDEVGPI-MATKKRSIHQEAPKYMEQSTESEILITGIKVIDLLAPYSKGG 197

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214
           ++G+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +  N 
Sbjct: 198 KVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVNVNP 256

Query: 215 K---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           K         K  +V    +E P  R    L+ +TIAE F  +G +VL  +D+I RF  +
Sbjct: 257 KEKRGSTAGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRFTQA 316

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +    G+IT+V ++ V  D+  DP  
Sbjct: 317 GAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTRIGSITSVQAIYVPADDLTDPAP 374

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  + +++ R++
Sbjct: 375 ATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMMDPLIVGEEHYAVACQVQNILQRYK 434

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 435 SLQDIIAILG 444


>gi|256387191|gb|ACU80596.1| ATP synthase beta subunit [Priapulus caudatus]
          Length = 366

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 149/276 (53%), Gaps = 24/276 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PID      +G ++ +    I ++ P        ++  +TGI+V+D+  P 
Sbjct: 52  GRIMNVIGEPIDE-----RGPITTKHKASIHAEAPEFAEMSTDQEILETGIKVVDLLAPY 106

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED-- 208
             G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE   
Sbjct: 107 VKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGV 165

Query: 209 -YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
             L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  + 
Sbjct: 166 ISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAG 225

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   
Sbjct: 226 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAPA 283

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +  + LD   VL+R +AE G YP VDPL S+SR+ D
Sbjct: 284 TTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMD 319


>gi|239928881|ref|ZP_04685834.1| F0F1 ATP synthase subunit beta [Streptomyces ghanaensis ATCC 14672]
 gi|291437208|ref|ZP_06576598.1| F0F1 ATP synthase subunit beta [Streptomyces ghanaensis ATCC 14672]
 gi|291340103|gb|EFE67059.1| F0F1 ATP synthase subunit beta [Streptomyces ghanaensis ATCC 14672]
          Length = 482

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 176/327 (53%), Gaps = 17/327 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D++   G+    I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 105 GKVFNTLGEVLNVDETY-DGE-RWPIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 162

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + I++      + K+ 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 283 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + A D       + +++ ++++ +DI  I    
Sbjct: 341 LSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYNAAMRVKNILQKYKDLQDIIAI---- 396

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 397 LGIDELGEEDKLVVHRARRVERFLSQN 423


>gi|295687682|ref|YP_003591375.1| ATP synthase F1 subunit beta [Caulobacter segnis ATCC 21756]
 gi|295429585|gb|ADG08757.1| ATP synthase F1, beta subunit [Caulobacter segnis ATCC 21756]
          Length = 536

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 162/321 (50%), Gaps = 23/321 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR++N +G+PID    + + D++  I    P    +    +   TGI+VI
Sbjct: 135 IRVPVGPGTLGRIMNVIGEPIDEQGPI-RSDITRTIHRDAPTFAEQTNTAEVLVTGIKVI 193

Query: 153 DIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+     L++  A++     V+   VGER RE  +   +
Sbjct: 194 DLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHE 252

Query: 209 YLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
            +  N+              +  +V    +E P  R    LT ++IAEYF   +G +VLL
Sbjct: 253 MIESNVNVDPKANNGSTEGSRCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLL 312

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ 
Sbjct: 313 FVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIY 370

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R +A +  +P VDPL S SR+ D     +E   V+
Sbjct: 371 VPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLVIGEEHYTVA 430

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++ +++  +DI  I G
Sbjct: 431 RRVQEVLQQYKALKDIIAILG 451


>gi|327540206|gb|EGF26796.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica WH47]
          Length = 479

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 178/333 (53%), Gaps = 23/333 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+PID    + + D    I  + PP        + F+TGI+V+D+ TP   G 
Sbjct: 94  GRVFNVLGQPIDKRGDV-QADDYWPIHRQAPPVNELSTNTELFETGIKVVDLLTPFVRGG 152

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213
           + G+F G+G+GK+ +L+ + AR  S      + + VGER RE      E  E  +G    
Sbjct: 153 KAGLFGGAGLGKTVILTELIARIASSHGGYSVFAGVGERTREGTDLWLEMQETEIGSTGR 212

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             ++++ +V    +E P  R    L+A+T+AEYF  + G + LL +D+I RF+ +  E++
Sbjct: 213 NVIEQTCMVFGQMNEPPGSRLRVALSALTMAEYFRDTTGADTLLFVDNIFRFSQAGSEVS 272

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G IT+V +V V  D+  DP   +   
Sbjct: 273 ALLGRMPSAVGYQPTLATEMGALQERI--TSTKQGAITSVQAVYVPADDPTDPAPATAFG 330

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  I L RS++E+G YP +DPLAS SR+ D  +  D    ++  +  ++ R+ E +DI
Sbjct: 331 QLDAFIYLERSISEKGIYPAIDPLASNSRILDPQYVGDRHYTIARRVQTILQRYRELQDI 390

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     GVD + ++    VH+   I  FL Q
Sbjct: 391 IAI----LGVDELSEEDKTIVHRARRIERFLSQ 419


>gi|195126431|ref|XP_002007674.1| GI13073 [Drosophila mojavensis]
 gi|193919283|gb|EDW18150.1| GI13073 [Drosophila mojavensis]
          Length = 618

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 163/319 (51%), Gaps = 25/319 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTG 148
            R+       GR+IN +G PID      +G++  E  S +    P +    V+     TG
Sbjct: 144 IRVPVGKTVLGRIINVVGDPIDE-----RGEIKSEFYSFIHNEAPLLEELSVKPEILVTG 198

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+VID+  P   G +IG+F G+G+GK+ L+    +  A+S     V +   GER RE   
Sbjct: 199 IKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGND 257

Query: 202 -VREFIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
              E IE     L D+  K  +V    +E P  R    LT +TIAEYF    G +VLL +
Sbjct: 258 LYHEMIETKVISLEDDTSKVALVYGQMNEPPGARSRVVLTGLTIAEYFRDIDGQDVLLFI 317

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V 
Sbjct: 318 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTKNGSITSVQAVYVP 375

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     DE   V+ +
Sbjct: 376 ADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRVLDPDIVGDEHYNVARA 435

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   +  ++  +DI  I G
Sbjct: 436 VQKTLQGYKSLQDIIAILG 454


>gi|119416492|emb|CAI34837.1| ATP synthase beta chain, mitochondrial precursor [Polytomella sp.
           Pringsheim 198.80]
          Length = 574

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 17/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +   D+   I  + P    +   ++   TGI+V+D+  P   G
Sbjct: 118 LGRIMNVIGEPVDEQGPIDAADI-WSIHREAPEFTEQSTEQEILVTGIKVVDLLAPYQRG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLG 211
            +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE     LG
Sbjct: 177 GKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLG 236

Query: 212 DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 237 AERGNSKCTLVYGQMNEPPGARARVALTGLTVAEYFRDIEGQDVLLFVDNIFRFTQANSE 296

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   + 
Sbjct: 297 VSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAVYVPADDLTDPGPATT 354

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+RS+AE G YP VDPL S SR+ +     A+   +   +  ++  ++  +
Sbjct: 355 FAHLDATTVLSRSIAELGIYPAVDPLDSTSRMRNPNVIGAEHYNVARGVQKVLQDYKNLQ 414

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 415 DIIAILG 421


>gi|4519282|dbj|BAA75556.1| ATP synthase beta-subunit [Volvox rousseletii]
          Length = 376

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|320407251|gb|ADW27401.1| ATP synthase beta subunit [Ophelia limacina]
          Length = 359

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 148/285 (51%), Gaps = 16/285 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +        I    P  +     ++  +TGI+V D+  P   G
Sbjct: 31  LGRIINVIGEPIDERGPV-NAKTYWGIHQDAPEFVEMSVEQEILETGIKVADLLAPYAKG 89

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IGVF G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 90  GKIGVFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 148

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 149 KDDSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 208

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 209 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATTF 266

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           + LD   VL+R +AE G YP VDPL S SR+ DK    +E   V+
Sbjct: 267 AHLDATTVLSRGIAELGIYPAVDPLDSNSRILDKNVVGEEHYTVA 311


>gi|294668638|ref|ZP_06733734.1| ATP synthase F1, beta subunit [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309400|gb|EFE50643.1| ATP synthase F1, beta subunit [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 463

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG P+D    +   + +  I  + P         +  +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPVDEAGPVNASN-TRAIHQEAPKFDELSSTTELLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270
             +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++
Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI
Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|45657126|ref|YP_001212.1| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|294828180|ref|NP_712957.2| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar Lai
           str. 56601]
 gi|81568536|sp|Q72SX9|ATPB_LEPIC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|302393678|sp|Q8F2J5|ATPB_LEPIN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|45600364|gb|AAS69849.1| ATP synthase beta chain [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|293386027|gb|AAN49975.2| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 467

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 15/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LGK ID   ++   + +  I    P         + F+TGI+VID+  P  
Sbjct: 87  ATLGRIFNVLGKTIDEGPAITVKE-TRPIHRAAPSFDELTSKTEVFETGIKVIDLLAPYI 145

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212
            G + G+F G+G+GK+ L+     +         + + VGER RE     RE  E  + D
Sbjct: 146 KGGKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFAGVGERTREGNDLWREMKESGVID 205

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K+V+     +E P  R    L+A+T+AE+F  S G +VLL +D+I RF+ +  E++ 
Sbjct: 206 ---KTVLCYGQMNEPPGARLRVALSALTMAEHFRDSIGTDVLLFVDNIFRFSQAGSEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPANAFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD   VL+R+++++G YP VDPL S SR+ +     +E  LV+  +  ++ R+++ +DI 
Sbjct: 321 LDATTVLSRAISDKGIYPAVDPLDSTSRVMNAQVLGEEHYLVAREVQRILQRYKDLQDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|119350535|gb|ABL63218.1| AtpB [Pleurastrum insigne]
          Length = 388

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  K   ++ I  + P  ++       F+TGI+V+D+  P  
Sbjct: 36  LGRIFNVLGEPVD---NLGPVKQSETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 93  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 152

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 153 EKNLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 271 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQSVKKTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|253997694|ref|YP_003049758.1| ATP synthase F1 subunit beta [Methylotenera mobilis JLW8]
 gi|253984373|gb|ACT49231.1| ATP synthase F1, beta subunit [Methylotenera mobilis JLW8]
          Length = 475

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 157/305 (51%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + D    I  K P            +TGI+VID+  P   G 
Sbjct: 93  GRIMDVLGRPIDEAGPI-ESDERRSIHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGG 151

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +         D
Sbjct: 152 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMAEAGVIKLD 210

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           ++K+S V  V    +E P  R    L+ +T+AE F  +G +VL  +D+I R+  +  E++
Sbjct: 211 DMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 270

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +   
Sbjct: 271 ALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 328

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D     +E  ++  S+   + R++E RDI
Sbjct: 329 HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYQVARSVQQTLQRYKELRDI 388

Query: 390 RLIGG 394
             I G
Sbjct: 389 IAILG 393


>gi|167648692|ref|YP_001686355.1| F0F1 ATP synthase subunit beta [Caulobacter sp. K31]
 gi|190358276|sp|B0T335|ATPB_CAUSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167351122|gb|ABZ73857.1| ATP synthase F1, beta subunit [Caulobacter sp. K31]
          Length = 542

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 22/319 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR++N +G+PID    + K D+   I    P    +    +   TGI+VID
Sbjct: 143 RVPVGPGTLGRIMNVIGEPIDEQGPI-KSDIFRTIHRDAPTFAEQTNTAEVLVTGIKVID 201

Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           +  P   G +IG+F G+G+GK+     L++  A++     V+   VGER RE  +   + 
Sbjct: 202 LMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHEM 260

Query: 210 LGDNLK------------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
           +  N+             +  +V    +E P  R    LT ++IAEYF   +G +VLL +
Sbjct: 261 IESNVNVDPKINGSTEGSRCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLLFV 320

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V 
Sbjct: 321 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIYVP 378

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +A +  +P VDPL S SR+ D      E   V+ S
Sbjct: 379 ADDLTDPAPAASFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLIIGQEHYDVARS 438

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ +++  +DI  I G
Sbjct: 439 VQEVLQQYKSLKDIIAILG 457


>gi|89574015|gb|ABD77233.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Mus musculus]
          Length = 445

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 77  LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 135

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+G + L+    +  A++     V    VGER RE      E IE     L
Sbjct: 136 GKIGLFGGAGVGXTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 372

Query: 389 IRLIGG 394
           I  I G
Sbjct: 373 IIAILG 378


>gi|11559334|dbj|BAB18825.1| ATP synthase beta-subunit [Yamagishiella unicocca]
          Length = 376

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRSAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|317055015|ref|YP_004103482.1| ATP synthase F1 subunit beta [Ruminococcus albus 7]
 gi|315447284|gb|ADU20848.1| ATP synthase F1, beta subunit [Ruminococcus albus 7]
          Length = 468

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 156/297 (52%), Gaps = 9/297 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG P+D   +    +   EI  + P    +    +  +TGI+VID+  P   G +
Sbjct: 90  RMFNLLGDPVDNLPAPETAE-RWEIHREPPSYEEQTAANEILETGIKVIDLIAPYLKGGK 148

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+     +       IS+   VGER RE  + + E      + K+V+
Sbjct: 149 IGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGERTREGNDLYWEMKESGVIDKTVL 208

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 209 VYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 269 AVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +RS+A  G +P VDPL S SR+       +E   V+  +  ++ R+ E +DI  I G
Sbjct: 327 SRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVARQVQSILQRYVELQDIIAIMG 383


>gi|113954817|ref|YP_731481.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9311]
 gi|123031607|sp|Q0I7U1|ATPB_SYNS3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113882168|gb|ABI47126.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9311]
          Length = 487

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   +++  I  + P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVNT-NVTSPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ER+  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERV--ASTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VLNR+LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|237832039|ref|XP_002365317.1| ATP synthase beta chain, putative [Toxoplasma gondii ME49]
 gi|78057343|gb|ABB17195.1| mitochondrial F1-ATP synthase beta subunit precursor [Toxoplasma
           gondii]
 gi|211962981|gb|EEA98176.1| ATP synthase beta chain, putative [Toxoplasma gondii ME49]
 gi|221486827|gb|EEE25073.1| ATP synthase beta chain, putative [Toxoplasma gondii GT1]
 gi|221506525|gb|EEE32142.1| ATP synthase beta chain, putative [Toxoplasma gondii VEG]
          Length = 560

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 29/315 (9%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160
           GR++N +G+P+D    +  K   S+    +  P    Q  E G  +TGI+V+D+  P   
Sbjct: 163 GRIMNVIGEPVDECGPVPAKKTYSIH---RAAPLFADQSTEPGLLQTGIKVVDLLAPYAK 219

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK T+L M   ++  +K     + + VGER RE  +   + +   +  
Sbjct: 220 GGKIGLFGGAGVGK-TVLIMELINNVANKHGGFSVFAGVGERTREGNDLYHEMMTTGVIK 278

Query: 215 -------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                         K+ +V    +E P  R    LTA+++AEYF   +G +VLL +D+I 
Sbjct: 279 RKKLEDGKFDFTGSKAALVYGQMNEPPGARARVALTALSVAEYFRDEQGQDVLLFIDNIY 338

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ ++L +L ERI  +  +KG+IT+V +V V  D+ 
Sbjct: 339 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAVYVPADDL 396

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR LA +    +      +   L
Sbjct: 397 TDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLAPEIVGQEHYDTARATQKL 456

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 457 LQDYKSLQDIIAILG 471


>gi|119896451|ref|YP_931664.1| F0F1 ATP synthase subunit beta [Azoarcus sp. BH72]
 gi|166201689|sp|A1K1S2|ATPB_AZOSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119668864|emb|CAL92777.1| ATP synthase beta chain [Azoarcus sp. BH72]
          Length = 466

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +   +L   I  K P         +  +TGI+VID+  P   G
Sbjct: 90  LGRIMDVLGRPIDEAGPVETDELRA-IHQKAPKFDELSPSVELLETGIKVIDLICPFAKG 148

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K
Sbjct: 149 GKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +
Sbjct: 208 VAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +
Sbjct: 268 PSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTV 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R +A  G YP VDPL S SR  D     +E   V+ ++   + +++E RDI  I G
Sbjct: 326 VLSRDIAALGIYPAVDPLDSTSRQLDPLVVGEEHYSVARAVQQTLQKYKELRDIIAILG 384


>gi|119350449|gb|ABL63175.1| AtpB [Ascochloris multinucleata]
          Length = 392

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G+ ++ I    P   +       F+TGI+V+D+  P   G
Sbjct: 38  LGRIFNVLGEPVDNLGPVKPGE-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 96

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 97  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 157 NLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 214

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 273 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQSVKKTLQRYKE 331

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 332 LQDIIAILG 340


>gi|4519278|dbj|BAA75554.1| ATP synthase beta-subunit [Volvox barberi]
 gi|11559346|dbj|BAB18831.1| ATP synthase beta-subunit [Pandorina morum]
 gi|297306750|dbj|BAA75580.2| ATP synthase beta-subunit [Pandorina colemaniae]
          Length = 376

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|58617198|ref|YP_196397.1| F0F1 ATP synthase subunit beta [Ehrlichia ruminantium str. Gardel]
 gi|58416810|emb|CAI27923.1| ATP synthase beta chain [Ehrlichia ruminantium str. Gardel]
          Length = 515

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
              GRV + LG PID    L K D S++ I S+VP   +++   +   TGI+VID+  P 
Sbjct: 123 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 182

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212
             G ++G+F G+G+GK+ L+     +       +S+   VGER RE  +   + +     
Sbjct: 183 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 242

Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           NL+     ++V+V    +E P  R    L+A+T+AEYF   +  +VL  +D+I RF  S 
Sbjct: 243 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 302

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +E+  + ERI  +   +G+IT+V ++ V  D+  DP   
Sbjct: 303 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 360

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + LD   VL+R +AE G YP VDPL S S+
Sbjct: 361 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 393


>gi|258690468|gb|ACV87996.1| ATP synthase beta subunit [Leucilla nuttingi]
          Length = 427

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 17/317 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   I   A   GR++N +G+PID    +     S  I ++ P  +     ++  +TGI+
Sbjct: 53  GPITIPVGAETLGRIMNVIGEPIDERGPI-NAKASAPIHAEAPEFVEMSVEQEILETGIK 111

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI 206
           V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +  
Sbjct: 112 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLY 170

Query: 207 EDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
            + +   +        K  +V     E P  R    LT +T+AEYF  K G +VLL +D+
Sbjct: 171 HEMIVGGVIVLDKPGSKVALVYGQMIEPPGARAGFALTGLTVAEYFRDKEGQDVLLFIDN 230

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D
Sbjct: 231 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPAD 288

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      E   +  S+ 
Sbjct: 289 DLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGQEHYDIARSVQ 348

Query: 378 HLIHRFEETRDIRLIGG 394
            ++  ++  +DI  I G
Sbjct: 349 KILQGYKSLQDIIAILG 365


>gi|256825629|ref|YP_003149589.1| F0F1 ATP synthase subunit beta [Kytococcus sedentarius DSM 20547]
 gi|256689022|gb|ACV06824.1| ATP synthase, F1 beta subunit [Kytococcus sedentarius DSM 20547]
          Length = 486

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
           F+TGI+VID+ TP   G +IG+F G+G+GK+ L+  M AR   D     + + VGER RE
Sbjct: 149 FETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIARVARDHGGVSVFAGVGERTRE 208

Query: 202 VREF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             +  +E      L ++ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I
Sbjct: 209 GNDLMVEMEEAGVLGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNI 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+
Sbjct: 269 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADD 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTH 378
           + DP   +  + LD    L+R +A  G YP VDPL S SR+ D  + A D     + +  
Sbjct: 327 YTDPAPATTFAHLDATTELSRPIASMGIYPAVDPLTSTSRILDPRYIARDHYDTAARVKS 386

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R++E +DI  I G
Sbjct: 387 ILQRYKELQDIIAILG 402


>gi|119350485|gb|ABL63193.1| AtpB [Elakatothrix viridis]
          Length = 392

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 160/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +    + I  + PP ++       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGEPVD---NLGPVETKEKLPIHRQAPPFVDLDTRLSIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LG 211
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       + 
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 155

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 156 KNLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   EK      S+   + R++E 
Sbjct: 274 FAHLDATTVLSRVLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQSVKRTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|331007714|ref|ZP_08330844.1| ATP synthase beta chain [gamma proteobacterium IMCC1989]
 gi|330418473|gb|EGG93009.1| ATP synthase beta chain [gamma proteobacterium IMCC1989]
          Length = 465

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG PID    +G+ +  M I  K P        E+  +TGI+VID+  P   G 
Sbjct: 84  GRIMDVLGSPIDECGPIGEQE-RMPIHRKAPAYDELSASEELLETGIKVIDLVCPFAKGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           ++G+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +     
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVDVET 202

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 203 FSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+    ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVFQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A +G YP VDPL S SR  D     +E   +   +  ++ R++E +DI 
Sbjct: 321 LDSTVVLSRDIASKGIYPAVDPLGSTSRQLDPLIIGNEHYDIARGVQTVLQRYKELKDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|89889622|ref|ZP_01201133.1| H(+)-transporting ATP synthase beta chain [Flavobacteria bacterium
           BBFL7]
 gi|89517895|gb|EAS20551.1| H(+)-transporting ATP synthase beta chain [Flavobacteria bacterium
           BBFL7]
          Length = 503

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K GD  + I    P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGNLPKTGDNGLSIHRSAPAFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D                        K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DAFMHSMEEGGWDLQKVDKEIMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +  +   ++  L+ R++E +DI  I G
Sbjct: 388 LGKEHYECAQNVKELLQRYKELQDIIAILG 417


>gi|4519354|dbj|BAA75592.1| ATP synthase beta-subunit [Phacotus lenticularis]
          Length = 376

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D D    K D ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVD-DMGPVKVDETLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLVDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   ++ T    + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGAAQTVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|109898980|ref|YP_662235.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas atlantica T6c]
 gi|122971827|sp|Q15SF7|ATPB1_PSEA6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|109701261|gb|ABG41181.1| ATP synthase F1, beta subunit [Pseudoalteromonas atlantica T6c]
          Length = 537

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 17/309 (5%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149
           G  ++        R+ N  G PIDG     + D     + + PPA+ +   + + F+TGI
Sbjct: 88  GPLKVPVGPSTLSRMFNVFGAPIDGHTY--QHDGKWRSVHQAPPALTKISSQLQIFETGI 145

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----V 202
           +++D+  PL  G + G+F G+G+GK+ LLS    +    +  +S+   +GER RE     
Sbjct: 146 KIVDVLCPLERGGKAGLFGGAGVGKTVLLSEMIHNMVSQQQGVSIFCGIGERCREGEELY 205

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           RE  E  + DN+   V++    +E P  R      A+T+AEYF   +  +VLL++D+I R
Sbjct: 206 REMKEAGVLDNM---VMLFGQMNEPPGSRFRIGHAALTMAEYFRDDEKKDVLLLIDNIFR 262

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G++P   GY  ++ +EL  L ERI  +  E G +T++ +V V  D+  
Sbjct: 263 FIQAGSEVSGLMGQMPSRMGYQPTLGTELAGLEERI--ANTEDGAVTSIQAVYVPADDFT 320

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP A    S L   +VL+R  A EG YP VDPL S S+LA           V+  +  ++
Sbjct: 321 DPAAVHTFSHLSATLVLSRKRASEGFYPAVDPLQSSSKLATPTVVGQRHYDVARQVKQIL 380

Query: 381 HRFEETRDI 389
            ++ E +DI
Sbjct: 381 AQYNELKDI 389


>gi|319404806|emb|CBI78407.1| ATP synthase beta chain [Bartonella rochalimae ATCC BAA-1498]
          Length = 530

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 160/312 (51%), Gaps = 21/312 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D D  L        I  + P  + +    +   TGI+VID+  P  
Sbjct: 136 ATLGRIMNVIGEPVD-DAGLIMATKKRSIHQEAPQYVEQSTESEILVTGIKVIDLLAPYS 194

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G ++G+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  + 
Sbjct: 195 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 253

Query: 212 DNLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            + +        K  +V    +E P  R    L+ +TIAE F  +G +VL  +D+I RF 
Sbjct: 254 VDPRENGSTVGSKCALVYGQMNEPPGARARVALSGLTIAENFRDEGQDVLFFVDNIFRFT 313

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP
Sbjct: 314 QAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTDP 371

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R
Sbjct: 372 APATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQR 431

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 432 YKSLQDIIAILG 443


>gi|11559350|dbj|BAB18833.1| ATP synthase beta-subunit [Pandorina morum]
          Length = 376

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|229593481|ref|YP_002875600.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens SBW25]
 gi|259585448|sp|C3K1E6|ATPB_PSEFS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|229365347|emb|CAY53725.1| ATP synthase beta chain [Pseudomonas fluorescens SBW25]
          Length = 458

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 17/336 (5%)

Query: 69  IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G D+V       +       GR+++ LG PID       G +  E
Sbjct: 49  VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDE-----AGPIDTE 103

Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    +       +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 104 ERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIR 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N L K  +V    +E P  R    LT +
Sbjct: 164 NIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G++VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 224 TMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 281

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 282 TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 341

Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             D      E       + +++ R++E +DI  I G
Sbjct: 342 QLDPNVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377


>gi|183206562|gb|ACC54479.1| ATP synthase beta subunit [Campanula mirabilis]
          Length = 475

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 36  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 96  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 152

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 211

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E+
Sbjct: 212 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 271

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 272 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 329

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 330 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 389

Query: 389 IRLIGG 394
           I  I G
Sbjct: 390 IITILG 395


>gi|118573533|sp|Q5FGY3|ATPB_EHRRG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 504

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
              GRV + LG PID    L K D S++ I S+VP   +++   +   TGI+VID+  P 
Sbjct: 112 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 171

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212
             G ++G+F G+G+GK+ L+     +       +S+   VGER RE  +   + +     
Sbjct: 172 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 231

Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           NL+     ++V+V    +E P  R    L+A+T+AEYF   +  +VL  +D+I RF  S 
Sbjct: 232 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 291

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +E+  + ERI  +   +G+IT+V ++ V  D+  DP   
Sbjct: 292 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 349

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + LD   VL+R +AE G YP VDPL S S+
Sbjct: 350 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 382


>gi|14718267|gb|AAK72871.1| ATP synthase beta subunit [Xyris sp. Chase 154]
          Length = 483

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 158/305 (51%), Gaps = 20/305 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +  +   + F+TGI+V+D+  P
Sbjct: 98  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFVQLETRLEIFETGIKVVDLLAP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLG-- 211
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  + +IE      
Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYIEMKESGV 214

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL KS V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +
Sbjct: 215 INEKNLTKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQNVLLFIDNIFRFVQA 274

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 332

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +   +    +  +    +   + R++
Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQLRIVGKEHYETAQRVKQTLQRYK 392

Query: 385 ETRDI 389
           E +DI
Sbjct: 393 ELQDI 397


>gi|58579145|ref|YP_197357.1| F0F1 ATP synthase subunit beta [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417771|emb|CAI26975.1| ATP synthase beta chain [Ehrlichia ruminantium str. Welgevonden]
          Length = 515

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
              GRV + LG PID    L K D S++ I S+VP   +++   +   TGI+VID+  P 
Sbjct: 123 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 182

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212
             G ++G+F G+G+GK+ L+     +       +S+   VGER RE  +   + +     
Sbjct: 183 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 242

Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           NL+     ++V+V    +E P  R    L+A+T+AEYF   +  +VL  +D+I RF  S 
Sbjct: 243 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 302

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +E+  + ERI  +   +G+IT+V ++ V  D+  DP   
Sbjct: 303 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 360

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + LD   VL+R +AE G YP VDPL S S+
Sbjct: 361 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 393


>gi|57239187|ref|YP_180323.1| F0F1 ATP synthase subunit beta [Ehrlichia ruminantium str.
           Welgevonden]
 gi|81637893|sp|Q5HB71|ATPB_EHRRW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|57161266|emb|CAH58187.1| ATP synthase beta chain [Ehrlichia ruminantium str. Welgevonden]
          Length = 504

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
              GRV + LG PID    L K D S++ I S+VP   +++   +   TGI+VID+  P 
Sbjct: 112 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 171

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212
             G ++G+F G+G+GK+ L+     +       +S+   VGER RE  +   + +     
Sbjct: 172 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 231

Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           NL+     ++V+V    +E P  R    L+A+T+AEYF   +  +VL  +D+I RF  S 
Sbjct: 232 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 291

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            EI+   G +P A GY  ++ +E+  + ERI  +   +G+IT+V ++ V  D+  DP   
Sbjct: 292 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 349

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + LD   VL+R +AE G YP VDPL S S+
Sbjct: 350 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 382


>gi|4519338|dbj|BAA75584.1| ATP synthase beta-subunit [Pandorina unicocca]
          Length = 376

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|329945883|ref|ZP_08293570.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328528331|gb|EGF55309.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 478

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G V N  G  ++    LG G+  +EI     + + PPA ++ +  E+ F+TGI+VID+ T
Sbjct: 99  GHVFNVTGDVLN----LGPGE-QLEIAERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    +   +S+   VGER RE  + I E     
Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SRL    +   E   V++ +  ++ + +E +DI 
Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391

Query: 391 LIGG 394
            I G
Sbjct: 392 AILG 395


>gi|298293437|ref|YP_003695376.1| ATP synthase F1 subunit beta [Starkeya novella DSM 506]
 gi|296929948|gb|ADH90757.1| ATP synthase F1, beta subunit [Starkeya novella DSM 506]
          Length = 477

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 156/313 (49%), Gaps = 22/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +  G  +  I    P    +    +   TGI+V+D+  P  
Sbjct: 83  ATLGRIMNVIGEPVDEAGPV-VGTTTRGIHQPAPSYAEQSTEAEILVTGIKVVDLLAPYS 141

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215
            G ++G+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   + 
Sbjct: 142 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESKVN 200

Query: 216 -------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
                        K  +V    +E P  R    LT +T+AEYF  +G +VL  +D+I RF
Sbjct: 201 VDPHENNGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEYFRDQGQDVLFFVDNIFRF 260

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  D
Sbjct: 261 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTD 318

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381
           P   +  + LD   VL+RS+AE+G YP VDPL S SR+       +E   V+  +   + 
Sbjct: 319 PAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPMILGEEHYNVARQVQQTLQ 378

Query: 382 RFEETRDIRLIGG 394
           R++  +DI  I G
Sbjct: 379 RYKSLQDIIAILG 391


>gi|4519294|dbj|BAA75562.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519296|dbj|BAA75563.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519298|dbj|BAA75564.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519300|dbj|BAA75565.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519302|dbj|BAA75566.1| ATP synthase beta-subunit [Eudorina illinoisensis]
 gi|4519342|dbj|BAA75586.1| ATP synthase beta-subunit [Eudorina cylindrica]
 gi|14020799|dbj|BAB47544.1| ATP synthase beta-subunit [Eudorina illinoisensis]
 gi|14020803|dbj|BAB47546.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|14020805|dbj|BAB47547.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|21956004|dbj|BAC06372.1| ATP synthase beta-subunit [Volvox gigas]
 gi|21956008|dbj|BAC06374.1| ATP synthase beta-subunit [Volvox africanus]
 gi|21956136|dbj|BAC06430.1| ATP synthase beta-subunit [Volvox carteri f. weismannia]
 gi|116256380|dbj|BAF35221.1| ATP synthase beta subunit [Volvox powersii]
 gi|116256400|dbj|BAF35231.1| ATP synthase beta subunit [Pleodorina starrii]
          Length = 376

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|87200415|ref|YP_497672.1| F0F1 ATP synthase subunit beta [Novosphingobium aromaticivorans DSM
           12444]
 gi|118573710|sp|Q2G5N5|ATPB_NOVAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|87136096|gb|ABD26838.1| ATP synthase F1 subcomplex beta subunit [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 481

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 21/311 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +G  + +  I +K P  + +        TGI+VID+  P   G
Sbjct: 89  LGRIMNVIGEPIDERGPVG-AEQTAPIHAKAPEFIEQSTEAAILVTGIKVIDLLAPYARG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   ++L   +    
Sbjct: 148 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 207

Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                     K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  
Sbjct: 208 ADGNPTPDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++ +L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 268 AGSEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTTKGSITSVQAIYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD    LNR+++E G YP VDPL S SR+   A    E  +    +   + ++
Sbjct: 326 PATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVLTPAVVGQEHYETARRVQETLQKY 385

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 386 KSLQDIIAILG 396


>gi|4063548|gb|AAC98332.1| ATP synthase beta subunit [Geranium sanguineum]
          Length = 456

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDY 209
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE     +E  E  
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 194

Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + ++ K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 195 VINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +   A+  ++   +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGAEHYEIAQRVKQTLQRY 372

Query: 384 EETRDI 389
           +E +DI
Sbjct: 373 KELQDI 378


>gi|4519352|dbj|BAA75591.1| ATP synthase beta-subunit [Pteromonas angulosa]
          Length = 376

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + K D ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGPV-KVDETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLVDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   ++ T    + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGAAQTVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|312963998|ref|ZP_07778469.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6]
 gi|311282033|gb|EFQ60643.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6]
          Length = 458

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+++ LG PID       G +  E    I    P    +       +TGI+VID+ 
Sbjct: 81  ATLGRIMDVLGNPIDE-----AGPIDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 135

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++ 
Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 255

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDLTDPSPATTFAH 313

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E       + +++ R++E +DI 
Sbjct: 314 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 373

Query: 391 LIGG 394
            I G
Sbjct: 374 AILG 377


>gi|254283668|ref|ZP_04958636.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B]
 gi|219679871|gb|EED36220.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B]
          Length = 461

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 16/339 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  E IS G  V + G     P      GR+++ LG+PID    +G+ + +  
Sbjct: 44  IVRTIAMGSSEGISRGLEVENTGAPVSVPVGVETLGRIMDVLGRPIDERGDIGEKERA-S 102

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P        E+  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   
Sbjct: 103 IHRDAPAYDELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAT 162

Query: 188 DKVIISL---VGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           +   +S+   VGER RE  +F        + D    +  K  +V    +E P  R    L
Sbjct: 163 EHSGLSVFAGVGERTREGNDFYYEMQESGVVDIENPSNSKVAMVYGQMNEPPGNRLRVAL 222

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ER
Sbjct: 223 TGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER 282

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S
Sbjct: 283 I--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDS 340

Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            SR  D     +E  ++   +  ++ R++E +DI  I G
Sbjct: 341 TSRQLDPLVIGNEHYEVARGVQSVLQRYKELKDIIAILG 379


>gi|126728278|ref|ZP_01744094.1| F0F1 ATP synthase subunit beta [Sagittula stellata E-37]
 gi|126711243|gb|EBA10293.1| F0F1 ATP synthase subunit beta [Sagittula stellata E-37]
          Length = 474

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 162/319 (50%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   +       GR++N +G+P+D    + + D    I +  P   ++    +   TGI+
Sbjct: 75  GPISVPVGTATLGRIMNVIGEPVDEKGPV-EADEYRPIHAPAPNFADQATEAEVLVTGIK 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201
           VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE    
Sbjct: 134 VIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGLSVFAGVGERTREGNDL 191

Query: 202 VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
             E IE      DNL  S   +V    +E P  R    LT +T+AE F  + G +VL  +
Sbjct: 192 YHEMIESGVLTPDNLTDSKIALVYGQMNEPPGARARIALTGLTMAEQFRDATGTDVLFFV 251

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V 
Sbjct: 252 DNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVP 309

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D     +E   V+  
Sbjct: 310 ADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPQVIGEEHYQVARD 369

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ R++  +DI  I G
Sbjct: 370 VQGILQRYKSLQDIIAILG 388


>gi|329847480|ref|ZP_08262508.1| ATP synthase F1, beta subunit [Asticcacaulis biprosthecum C19]
 gi|328842543|gb|EGF92112.1| ATP synthase F1, beta subunit [Asticcacaulis biprosthecum C19]
          Length = 482

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + +      I +  P   ++    +   TGI+VID+  P  
Sbjct: 92  ATLGRIMNVIGEPIDEAGPI-ETTFFNPIHADAPAFADQATSAELLVTGIKVIDLICPYA 150

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G ++G+F G+G+GK+     L++  A++     V    VGER RE      E IE  + 
Sbjct: 151 KGGKVGLFGGAGVGKTVTIQELINNIAKAYGGYSVFAG-VGERTREGNDLYHEMIESNVN 209

Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              G    +  +V    +E P  R    LT +  AEYF   +G +VL  +D+I RF  + 
Sbjct: 210 QKGGGGTSRCTLVYGQMNEPPGARARVALTGLAQAEYFRDVEGKDVLFFVDNIFRFTQAG 269

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+ RL ERI  +   KG+IT+V +V V  D+  DP   
Sbjct: 270 SEVSALLGRIPSAVGYQPTLATEMGRLQERI--TSTNKGSITSVQAVYVPADDLTDPAPA 327

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+RS+AE+G YP VDPL S SR+ D +    +     + +  ++ +++ 
Sbjct: 328 NSFAHLDATTVLSRSIAEQGIYPAVDPLDSTSRILDPRVVGQEHYDTATRVQEILQQYKA 387

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 388 LKDIIAILG 396


>gi|326499079|dbj|BAK06030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 517

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 17/311 (5%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GR++N  G PID    + KG     I ++ P  +++    +   TGI+V+D+ 
Sbjct: 123 PVGPGCLGRIMNVTGDPIDERGPI-KGTKLAPIHAEAPEFVDQSTSAEILVTGIKVVDLL 181

Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
            P   G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +   
Sbjct: 182 APYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQE 240

Query: 212 ------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                 D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  
Sbjct: 241 TGVIQLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQ 300

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP 
Sbjct: 301 AGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPA 358

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R ++E G YP VDPL S SR+ D      E     S +  ++  +
Sbjct: 359 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYDTASKVQQMLQEY 418

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 419 KSLQDIIAILG 429


>gi|302521948|ref|ZP_07274290.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB78]
 gi|318060706|ref|ZP_07979429.1| F0F1 ATP synthase subunit beta [Streptomyces sp. SA3_actG]
 gi|318075497|ref|ZP_07982829.1| F0F1 ATP synthase subunit beta [Streptomyces sp. SA3_actF]
 gi|302430843|gb|EFL02659.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB78]
          Length = 480

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 161/299 (53%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  +          I  + P     +   + F+TGI+VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNKPEENANVGERWAIHRQAPRFDELESKTEMFETGIKVIDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + I D + D+  + K+
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLI-DEMSDSGVIDKT 219

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +
Sbjct: 220 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 279

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 280 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 337

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++E+G YP VDPL S SR+ D  + A D       + +++ ++++ +DI  I G
Sbjct: 338 VLSRPISEKGIYPAVDPLDSTSRILDPRYIARDHYDTAMRVKNILQKYKDLQDIIAILG 396


>gi|146271651|emb|CAL25307.1| atpD beta synthase chain [Pseudomonas vancouverensis]
          Length = 284

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 8/286 (2%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG PID    +G+ +    I    P    +    +  +TGI+VID+  P   G ++G+F 
Sbjct: 1   LGNPIDEAGPIGE-EERWGIHRAAPSFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFG 59

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224
           G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  +V    
Sbjct: 60  GAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQM 119

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G +P A GY  
Sbjct: 120 NEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQP 179

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  +VL+R +A 
Sbjct: 180 TLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAS 237

Query: 345 EGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            G YP VDPL S SR  D      D  +    + +++ R++E +DI
Sbjct: 238 LGIYPAVDPLDSTSRQLDPNVIGNDHYETARGVQYVLQRYKELKDI 283


>gi|11559348|dbj|BAB18832.1| ATP synthase beta-subunit [Pandorina morum]
          Length = 376

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 165/325 (50%), Gaps = 23/325 (7%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G+  I P      GR+ N LG+P+D   ++ K + ++ I    P  ++       F
Sbjct: 15  VLDTGKPLIVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIF 73

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202
           +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE 
Sbjct: 74  ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREG 133

Query: 203 REF----------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
            +           +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +
Sbjct: 134 NDLYTEMKESGVIVEKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQD 191

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ 
Sbjct: 192 VLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQ 249

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK 
Sbjct: 250 AVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKH 308

Query: 372 L--VSSLTHLIHRFEETRDIRLIGG 394
                S+   + R++E +DI  I G
Sbjct: 309 YDRAQSVKKTLQRYKELQDIIAILG 333


>gi|325068185|ref|ZP_08126858.1| F0F1 ATP synthase subunit beta [Actinomyces oris K20]
          Length = 478

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G V N  G  ++    LG G+  +EI     + + PPA ++ +  E+ F+TGI+VID+ T
Sbjct: 99  GHVFNVTGDVLN----LGPGE-QLEITERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    +   +S+   VGER RE  + I E     
Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SRL    +   E   V++ +  ++ + +E +DI 
Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391

Query: 391 LIGG 394
            I G
Sbjct: 392 AILG 395


>gi|258690470|gb|ACV87997.1| ATP synthase beta subunit [Acanthascus dawsoni]
          Length = 361

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PID    +     S  I  + P  +     ++  +TGI+V+D+  P   G
Sbjct: 25  LGRIMNVIGDPIDERGPIDSEHRS-NIHQEAPEFVEMSVTQEILETGIKVVDLLAPYARG 83

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210
            +IG+F G+G+GK+ L+    +  +R+     V    VGER RE  +   +        L
Sbjct: 84  GKIGLFGGAGVGKTVLIMELINNISRAHGGYSVFAG-VGERTREGNDLYHEMITTGVISL 142

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
            D+  K  +V    +E P  R    LT +T+AE+F  K G +VLL +D+I RF  +  E+
Sbjct: 143 KDDKSKVSLVYGQMNEPPGARARVCLTGLTVAEHFRDKEGQDVLLFIDNIFRFTQAGSEV 202

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 203 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 260

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ +     +E   ++ S+  ++  ++  +D
Sbjct: 261 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMEPHIVGEEHYTIARSVQRVLQNYKSLQD 320

Query: 389 IRLIGG 394
           I  I G
Sbjct: 321 IIAILG 326


>gi|11559342|dbj|BAB18829.1| ATP synthase beta-subunit [Volvulina boldii]
          Length = 376

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D +  + K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|149236902|ref|XP_001524328.1| ATP synthase beta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146451863|gb|EDK46119.1| ATP synthase beta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 415

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 179/353 (50%), Gaps = 30/353 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN  G PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 29  LGRIINVTGDPID-DRGPIECKKRNPIHAEPPSFIEQSTAAEVLETGIKVVDLLAPYARG 87

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 88  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 146

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 204

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  +
Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQ 322

Query: 388 DIRLIGGYRPGVDLI--LDK-AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           DI  I     G+D +   DK  V +   I  FL Q     +  +VF  I+ KL
Sbjct: 323 DIIAI----LGMDELSEADKLTVERARKIQRFLSQP---FAVAEVFTGISGKL 368


>gi|116071285|ref|ZP_01468554.1| ATP synthase subunit B [Synechococcus sp. BL107]
 gi|116066690|gb|EAU72447.1| ATP synthase subunit B [Synechococcus sp. BL107]
          Length = 487

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + K   +  I  + P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPV-KTKTTAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ER+  + +  G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGTLQERVASTVE--GSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VLNR+LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSSSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|291531909|emb|CBK97494.1| ATP synthase F1 subcomplex beta subunit [Eubacterium siraeum 70/3]
          Length = 465

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D +    + +   EI    P    ++   +  +TGI+V+D+  P   G
Sbjct: 87  LGRIFNLLGEAVD-NKPQPETEEKWEIHRPAPSFEEQEGSTQVLETGIKVVDLIAPYLKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      ++K+
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKQHGGLSVFTGVGERTREGNDLYNEMTESGVIEKT 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+ +T+AEYF  K G +VLL +D+I RF  +  E++   G +
Sbjct: 206 TLVYGQMNEPPGARMRVALSGLTMAEYFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R+++  G +P VDPL S SR+       +E  ++   +  ++ R+ E +DI  I G
Sbjct: 324 VLSRNISSMGIFPAVDPLDSTSRILTPEIVGEEHYEVARQVQSILQRYNELQDIIAILG 382


>gi|326774105|ref|ZP_08233387.1| ATP synthase F1, beta subunit [Actinomyces viscosus C505]
 gi|326636244|gb|EGE37148.1| ATP synthase F1, beta subunit [Actinomyces viscosus C505]
          Length = 478

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G V N  G  ++    LG G+  +EI     + + PPA ++ +  E+ F+TGI+VID+ T
Sbjct: 99  GHVFNVTGDVLN----LGPGE-QLEITERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    +   +S+   VGER RE  + I E     
Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SRL    +   E   V++ +  ++ + +E +DI 
Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391

Query: 391 LIGG 394
            I G
Sbjct: 392 AILG 395


>gi|289433910|ref|YP_003463782.1| ATP synthase F1 beta subunit [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170154|emb|CBH26694.1| ATP synthase F1 beta subunit [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 456

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 201/403 (49%), Gaps = 28/403 (6%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG   + L +V++ +  I  +  + IGE   L  G +V + GR   +       G
Sbjct: 33  EYETHQG---NYLAEVVQ-HTGINTVSAIAIGEVSGLARGTIVNNLGRPIEVPVGEKVLG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG       ++   I    P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPE-PDTEVKWPIFRNQPKLSELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGRE----VREFIEDYLGDNLKKS 217
            G+F G+G+GKS L+     +        + + VGER RE     +E  E  +   L ++
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNAVFTGVGERVREGIGLYKELEESGV---LPQT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G++
Sbjct: 205 TVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKI 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD  I
Sbjct: 265 PITGGYQSTLSKEVGNFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDSTI 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL RS+A  G +P V+PL S SR  +  +  +    L   +  ++ R+ E ++I  + G 
Sbjct: 323 VLERSIAALGIFPAVNPLQSSSRALNPNFVGERHYNLAVQVKFILQRYMELQEIINVLGI 382

Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
               D   DK+ V++   I +FL Q    S     SE +F EI
Sbjct: 383 AELSD--EDKSLVNRARKIRNFLSQPFYVSEKFTGSEGIFVEI 423


>gi|42559032|gb|AAS20202.1| ATP synthase beta subunit [Xyris jupicai]
          Length = 482

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 158/305 (51%), Gaps = 20/305 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +  +   + F+TGI+V+D+  P
Sbjct: 95  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFVQLETRLEIFETGIKVVDLLAP 151

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLG-- 211
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  + +IE      
Sbjct: 152 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYIEMKESGV 211

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL KS V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +
Sbjct: 212 INEKNLTKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQNVLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +   +    +  +    +   + R++
Sbjct: 330 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQLRIVGKEHYETAQRVKQTLQRYK 389

Query: 385 ETRDI 389
           E +DI
Sbjct: 390 ELQDI 394


>gi|46909251|gb|AAT06143.1| ATP synthase beta subunit [Obelia sp. KJP-2004]
          Length = 427

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 146/272 (53%), Gaps = 14/272 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +        I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 64  LGRIMNVIGEPIDERGPIVTKS-KAPIHTEAPEFVEMSVQQEILITGIKVVDLLAPYAKG 122

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLG 211
            +IG+F G+G+GK+ L+S    +         + + VGER RE      EF+E     L 
Sbjct: 123 GKIGLFGGAGVGKTVLISELINNIAKAHGGYSVFAGVGERTREGNDLYHEFMETGVINLK 182

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           D+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 183 DDSSKVALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVS 242

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  +
Sbjct: 243 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTFA 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            LD + VL+R +AE G YP VDPL S SR+ D
Sbjct: 301 HLDANTVLSRGIAELGIYPAVDPLDSNSRILD 332


>gi|525291|emb|CAA52636.1| ATP synthase beta subunit [Triticum aestivum]
          Length = 553

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 17/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+PID    +   D  + I  + P  + +   ++   TGI+V+D+  P  
Sbjct: 162 ATLGRIINVIGEPIDHKGDIKTHDF-LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 220

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE  +  
Sbjct: 221 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIK 280

Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  + 
Sbjct: 281 LDEKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQAN 340

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   
Sbjct: 341 SEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 398

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++  ++ 
Sbjct: 399 TTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGVDHYNTARGVQKVLQNYKN 458

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 459 LQDIIAILG 467


>gi|51209972|ref|YP_063636.1| ATP synthase CF1 beta subunit [Gracilaria tenuistipitata var. liui]
 gi|75323126|sp|Q6B8S4|ATPB_GRATL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50657726|gb|AAT79711.1| ATP synthase CF1 beta subunit [Gracilaria tenuistipitata var. liui]
          Length = 475

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   D S+ I    P     +     F+TGI+V+D+  P   G
Sbjct: 91  LGRIFNVLGEPVDNLGDIQSED-SLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKG 149

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL------G 211
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+         
Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESKVINA 208

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           DNLK+S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 209 DNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 268

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D+  DP   + 
Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTTDGSITSIQAVYVPADDLTDPAPATT 326

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+RSLA +G YP VDPL S S +   +    +       +   + R++E +
Sbjct: 327 FAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGSQHYSTAQQIKSTLQRYKELQ 386

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 387 DIIAILG 393


>gi|167750158|ref|ZP_02422285.1| hypothetical protein EUBSIR_01127 [Eubacterium siraeum DSM 15702]
 gi|167656901|gb|EDS01031.1| hypothetical protein EUBSIR_01127 [Eubacterium siraeum DSM 15702]
 gi|291556548|emb|CBL33665.1| ATP synthase F1 subcomplex beta subunit [Eubacterium siraeum
           V10Sc8a]
          Length = 465

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ +D +    + +   EI    P    ++   +  +TGI+V+D+  P   G
Sbjct: 87  LGRIFNLLGEAVD-NKPQPETEEKWEIHRPAPSFEEQEGSTQVLETGIKVVDLIAPYLKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      ++K+
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKQHGGLSVFTGVGERTREGNDLYNEMTESGVIEKT 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+ +T+AEYF  K G +VLL +D+I RF  +  E++   G +
Sbjct: 206 TLVYGQMNEPPGARMRVALSGLTMAEYFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRM 265

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 323

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R+++  G +P VDPL S SR+       +E  ++   +  ++ R+ E +DI  I G
Sbjct: 324 VLSRNISSMGIFPAVDPLDSTSRILTPEIVGEEHYEVARQVQSILQRYNELQDIIAILG 382


>gi|34500012|gb|AAQ73588.1| ATP synthase beta subunit [Pasteurella bettyae]
          Length = 444

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 153/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    +G  +    I    P    +    +  +TGI+VID+  P   G 
Sbjct: 83  GRIMNVLGEPVDERGPIG-AEEEWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGG 141

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  
Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIATEHNGYSVFAGVGERTREGNDFYHEMTDSNVIDKVS 201

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +R++A  G YP VDPL S SR  D          +   +  ++ R++E +DI  I G
Sbjct: 320 SRNIASLGIYPAVDPLDSTSRQLDPLVVGXXXLNVARGVQGILQRYKELKDIIAILG 376


>gi|226698718|sp|P06541|ATPB_CHLRE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
          Length = 481

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 97  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 155

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 156 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 215

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 216 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 332 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|71891801|ref|YP_277530.1| F0F1 ATP synthase subunit beta [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|118573509|sp|Q494C3|ATPB_BLOPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71795907|gb|AAZ40658.1| ATP synthase, F1 sector, beta-subunit [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 462

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PID    + + +    I    P        +    TGI+VID+  P   G
Sbjct: 87  LGRVMNVLGEPIDMKGPIKEKE-KWSIHRSAPLYSELSTDQDLLVTGIKVIDLMCPFSKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG-DNLKKS 217
            +IG+F G+G+GK+  +    R+   +    S+   VGER RE  +F  + +  D + K 
Sbjct: 146 GKIGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFVGVGERTREGNDFYNEMINSDVINKV 205

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P
Sbjct: 206 ALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRIP 265

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY +++  E+  L ERI  +    G+IT+V +V V  D+  DP   +  S LD  IV
Sbjct: 266 SAVGYQSTLSEEMGILQERI--TSTSLGSITSVQAVYVPADDLTDPSPATTFSHLDATIV 323

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S S+  +      E   V+  +  ++ R++E +DI  I G
Sbjct: 324 LSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHYNVARDVKSILQRYQELKDIIAILG 381


>gi|162462751|ref|NP_001105340.1| ATP synthase subunit beta, mitochondrial precursor [Zea mays]
 gi|114420|sp|P19023|ATPBM_MAIZE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|22173|emb|CAA38140.1| unnamed protein product [Zea mays]
 gi|897618|gb|AAA70268.1| mitochondrial F-1-ATPase subunit 2 [Zea mays]
 gi|223943103|gb|ACN25635.1| unknown [Zea mays]
          Length = 553

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      KGD+     + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 161 ATLGRIINVIGEPIDE-----KGDIKTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 215

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 216 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 274

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                L D   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 275 SGVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 334

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 335 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 392

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 393 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 452

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 453 QNYKNLQDIIAILG 466


>gi|312139178|ref|YP_004006514.1| ATP synthase subunit beta [Rhodococcus equi 103S]
 gi|325673517|ref|ZP_08153208.1| ATP synthase F1 sector beta subunit [Rhodococcus equi ATCC 33707]
 gi|311888517|emb|CBH47829.1| ATP synthase beta chain AtpD [Rhodococcus equi 103S]
 gi|325555538|gb|EGD25209.1| ATP synthase F1 sector beta subunit [Rhodococcus equi ATCC 33707]
          Length = 482

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG   D  D+ G G D     + + PPA ++ +   +  +TGI+VID+ TP   
Sbjct: 104 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 160

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ 
Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G 
Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 281 MPSAVGYQPTLADEMGELQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L+R +++ G YP VDPL S SR+ +     A+  ++ + +  ++ +++E +DI  I G
Sbjct: 339 TELSRPISQMGIYPAVDPLTSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 398


>gi|34500016|gb|AAQ73590.1| ATP synthase beta subunit [Bisgaard Taxon 5]
          Length = 426

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +G  + +  I    P   ++    +  +TGI+VID+  P   G 
Sbjct: 83  GRIMNVLGEPIDERGPIG-AEENWSIHRAAPSYEDQSNSTELLETGIKVIDLICPFAKGG 141

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VG R RE  +F  +    N L K  
Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGXRTREGNDFYHEMTESNVLDKVS 201

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VL  +D+  R+  +  E++   G +P 
Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNNYRYTLAGTEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|68485407|ref|XP_713381.1| hypothetical protein CaO19.13098 [Candida albicans SC5314]
 gi|68485502|ref|XP_713334.1| hypothetical protein CaO19.5653 [Candida albicans SC5314]
 gi|46434817|gb|EAK94217.1| hypothetical protein CaO19.5653 [Candida albicans SC5314]
 gi|46434865|gb|EAK94264.1| hypothetical protein CaO19.13098 [Candida albicans SC5314]
          Length = 512

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 126 LGRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 184

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 185 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 243

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 244 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 301

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 302 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 359

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +    E   + + +   +  ++  +
Sbjct: 360 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATGVQQTLQAYKSLQ 419

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 420 DIIAILG 426


>gi|91178102|gb|ABE27286.1| mitochondrial F-ATPase beta subunit [Candida albicans]
          Length = 337

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 20/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G 
Sbjct: 20  GRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    +  
Sbjct: 79  KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D +    E   + + +   +  ++  +D
Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATGVQQTLQAYKSLQD 313

Query: 389 IRLIGG 394
           I  I G
Sbjct: 314 IIAILG 319


>gi|90418835|ref|ZP_01226746.1| ATP synthase, beta subunit [Aurantimonas manganoxydans SI85-9A1]
 gi|90336915|gb|EAS50620.1| ATP synthase, beta subunit [Aurantimonas manganoxydans SI85-9A1]
          Length = 484

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    + K +    I  + P  + +    +   TGI+VID+  P   G
Sbjct: 92  LGRIMNVIGEPIDEVGPI-KYESKRGIHQEAPAYIEQSPESQILVTGIKVIDLLAPYARG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLKK-- 216
            +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +   + K  
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDP 210

Query: 217 -----------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
                      + +V    +E P  R    LT +TIAE+F  +G +VL  +D+I RF  +
Sbjct: 211 HENNGSAEGSKAALVYGQMNEPPGARARVALTGLTIAEHFRDQGQDVLFFVDNIFRFTQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V ++ V  D+  DP  
Sbjct: 271 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VLNR+++E+G YP VDPL S SR+       +E   V+  +  ++ +++
Sbjct: 329 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSNSRMLSPMIIGEEHYDVARRVQEILQKYK 388

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 389 SLQDIIAILG 398


>gi|21223733|ref|NP_629512.1| F0F1 ATP synthase subunit beta [Streptomyces coelicolor A3(2)]
 gi|256785174|ref|ZP_05523605.1| F0F1 ATP synthase subunit beta [Streptomyces lividans TK24]
 gi|289769067|ref|ZP_06528445.1| ATP synthase F1, beta subunit [Streptomyces lividans TK24]
 gi|61219617|sp|P0A300|ATPB_STRCO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|61219618|sp|P0A301|ATPB_STRLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|405801|emb|CAA80327.1| H(+)-transporting ATP synthase [Streptomyces lividans]
 gi|8568795|emb|CAB94544.1| ATP synthase beta chain [Streptomyces coelicolor A3(2)]
 gi|289699266|gb|EFD66695.1| ATP synthase F1, beta subunit [Streptomyces lividans TK24]
          Length = 478

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 176/327 (53%), Gaps = 17/327 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D+    G+    I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNVDEQY-TGE-RWPIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + I++      + K+ 
Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKTA 218

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 279 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 336

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  + +A+       + +++ ++++ +DI  I    
Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYIAAEHYNAAMRVKNILQKYKDLQDIIAI---- 392

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 393 LGIDELGEEDKLVVHRARRVERFLSQN 419


>gi|83944756|ref|ZP_00957122.1| ATP synthase subunit B [Oceanicaulis alexandrii HTCC2633]
 gi|83851538|gb|EAP89393.1| ATP synthase subunit B [Oceanicaulis alexandrii HTCC2633]
          Length = 479

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 29/314 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR+++  G+PID       GD+   +M+ +    PA   Q  E     TGI+V+D+  P 
Sbjct: 87  GRIMSVTGEPIDE-----AGDVQAAMMAPIHRPAPAFEEQSTEAEILPTGIKVVDLLCPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLG 211
             G +IG+F G+G+GK+ L+       +  F    + + VGER RE      E IE  + 
Sbjct: 142 AKGGKIGLFGGAGVGKTVLIQELINNIAKLFGGYSVFAGVGERTREGNDLYYEMIESGVN 201

Query: 212 DNLKKS---------VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
            + K++          +V    +E P  R    L+ +  AEYF   +G +VL  +D+I R
Sbjct: 202 KDPKENGGSAEGSRCALVFGQMNEPPGARARVALSGLAQAEYFRDEEGKDVLFFVDNIFR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  
Sbjct: 262 FTQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTKKGSITSVQAVYVPADDLT 319

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VLNRS+AE+G YP VDPL S SR+ +     +E  +    +  ++
Sbjct: 320 DPAPATTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRILEPRIVGEEHYQTARRVQEIL 379

Query: 381 HRFEETRDIRLIGG 394
            R++  +DI  I G
Sbjct: 380 QRYKALQDIIAILG 393


>gi|295400692|ref|ZP_06810669.1| ATP synthase F1, beta subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112618|ref|YP_003990934.1| ATP synthase F1 subunit beta [Geobacillus sp. Y4.1MC1]
 gi|294977273|gb|EFG52874.1| ATP synthase F1, beta subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217719|gb|ADP76323.1| ATP synthase F1, beta subunit [Geobacillus sp. Y4.1MC1]
          Length = 473

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 173/330 (52%), Gaps = 19/330 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GRV N LG+PID    +   D   + + +  P       E +  +TGI+V+D+  P   
Sbjct: 92  LGRVFNVLGEPIDLQGEI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIK 150

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215
           G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE  +   + + D+  + 
Sbjct: 151 GGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHE-MKDSGVIS 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G
Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +    G+IT++ ++ V  D++ DP   +  S LD 
Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTSTGSITSIQAIYVPADDYTDPAPATTFSHLDA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R LAE G YP VDPLAS SR LA +    +  ++   +   + R+ E +DI  I 
Sbjct: 328 TTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYRELQDIIAI- 386

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + D+    VH+   I  FL Q+
Sbjct: 387 ---LGMDELSDEDKLVVHRARRIQFFLSQN 413


>gi|14020797|dbj|BAB47543.1| ATP synthase beta-subunit [Eudorina minodii]
          Length = 376

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|71909723|ref|YP_287310.1| F0F1 ATP synthase subunit beta [Dechloromonas aromatica RCB]
 gi|118573524|sp|Q477Z1|ATPB_DECAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71849344|gb|AAZ48840.1| ATP synthase F1 subcomplex beta subunit [Dechloromonas aromatica
           RCB]
          Length = 466

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   +L + I    P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPIDSTELRV-IHQPAPKFDELSSSVDLLETGIKVIDLICPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHAGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F   G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+    + + R++E RDI  I G
Sbjct: 328 LSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYSVARAVQMNLQRYKELRDIIAILG 385


>gi|4519284|dbj|BAA75557.1| ATP synthase beta-subunit [Pleodorina californica]
          Length = 376

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|284999819|dbj|BAI67810.1| ATP synthase beta-subunit [Gloeomonas sp. SAG 6.91]
          Length = 376

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGIAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|113869573|ref|YP_728062.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha H16]
 gi|123328788|sp|Q0K5M7|ATPB_RALEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113528349|emb|CAJ94694.1| Membrane-bound ATP synthase, F1 sector,beta-subunit [Ralstonia
           eutropha H16]
          Length = 467

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   +L   I  K P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPIASDELRA-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D +    +  ++   +   + R++E RDI  I G
Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILG 385


>gi|11514059|pdb|1E79|D Chain D, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
          Length = 482

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 160/315 (50%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+
Sbjct: 86  IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +    
Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHX 203

Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                   L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 321

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  +
Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 382 LQDYKSLQDIIAILG 396


>gi|21956014|dbj|BAC06377.1| ATP synthase beta-subunit [Vitreochlamys aulata]
 gi|21956016|dbj|BAC06378.1| ATP synthase beta-subunit [Vitreochlamys aulata]
          Length = 376

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P   +       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   +  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDIAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|86143764|ref|ZP_01062140.1| ATP synthase subunit B [Leeuwenhoekiella blandensis MED217]
 gi|85829807|gb|EAQ48269.1| ATP synthase subunit B [Leeuwenhoekiella blandensis MED217]
          Length = 502

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 163/330 (49%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG   L K G   + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGIGDLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 208 -DYL------GDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
            D++      G +L           K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 EDFMHSMEEGGWDLTKVDKAAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA- 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+  K  
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTKEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             AD      ++  L+ R++E +DI  I G
Sbjct: 388 LGADHYNCAQNVKELLQRYKELQDIIAILG 417


>gi|213964666|ref|ZP_03392866.1| ATP synthase F1, beta subunit [Corynebacterium amycolatum SK46]
 gi|213952859|gb|EEB64241.1| ATP synthase F1, beta subunit [Corynebacterium amycolatum SK46]
          Length = 479

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 167/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NA+G  +D +  LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 101 GHVFNAMGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 158

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 159 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 218

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 219 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRM 278

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD   
Sbjct: 279 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 336

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+RS+A +G YP V+PL S SR+ + +   +E  ++   + +++ + +E +DI  I G
Sbjct: 337 ELDRSIASKGIYPAVNPLTSTSRILEPSIVGEEHYRVAQQVINILQKNKELQDIIAILG 395


>gi|217968672|ref|YP_002353906.1| F0F1 ATP synthase subunit beta [Thauera sp. MZ1T]
 gi|217505999|gb|ACK53010.1| ATP synthase F1, beta subunit [Thauera sp. MZ1T]
          Length = 466

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 154/299 (51%), Gaps = 10/299 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +   +L   I  K P         +  +TGI+VID+  P   G
Sbjct: 90  LGRIMDVLGRPIDDAGPIETDELR-AIHQKAPKFDELSPSVELLETGIKVIDLICPFAKG 148

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K
Sbjct: 149 GKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
             +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +
Sbjct: 208 VAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +
Sbjct: 268 PSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTV 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           VL+R +A  G YP VDPL S SR  D     +E   V+    + + +++E RDI  I G
Sbjct: 326 VLSRDIAALGIYPAVDPLDSTSRQLDPLVVGEEHYNVARQVQMTLQKYKELRDIIAILG 384


>gi|295394660|ref|ZP_06804879.1| ATP synthase F1 sector beta subunit [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294972553|gb|EFG48409.1| ATP synthase F1 sector beta subunit [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 483

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 172/333 (51%), Gaps = 25/333 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMNRQRVE---KGFKTGIRVIDIFT 156
           G+V N  G  ++  DS+   D   EI  + P    A N  ++E   + F+TGI+VID+ T
Sbjct: 101 GKVFNVTGDVLN--DSMI--DEPYEITERWPIHRTAPNFDQLESKTQMFETGIKVIDLLT 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+  M  R   D     + + VGER RE  + I +     
Sbjct: 157 PYVLGGKIGLFGGAGVGKTVLIQEMITRVAQDHGGVSVFAGVGERTREGNDLIHEMDESG 216

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            L K+ +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 217 VLDKTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 276

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 277 LLGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAH 334

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPLAS SR+ D  +   D       +  ++ + +E +DI 
Sbjct: 335 LDATTELSRDIASRGLYPAVDPLASSSRILDPLYVGQDHYDTAVRVKQILQKNKELQDII 394

Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
            I     GVD + ++    VH+   I  FL Q+
Sbjct: 395 AI----LGVDELSEEDKLTVHRARRIEQFLSQN 423


>gi|71370860|gb|AAZ30659.1| ATP synthase beta subunit [Sycon lingua]
          Length = 427

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  ++    ++  +TGI+V+D+  P   G
Sbjct: 64  LGRIMNVIGEPIDERGPI-NAKATAPIHAEAPEFVDMSVEQEILETGIKVVDLLAPYAKG 122

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   +   
Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIVGGVIVL 181

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF  +  E+
Sbjct: 182 DKPGSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  ++G+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKEGSITSVQAIYVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D      E   +  S+  ++  ++  +D
Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGQEHYSIARSVQKILQDYKSLQD 359

Query: 389 IRLIGG 394
           I  I G
Sbjct: 360 IIAILG 365


>gi|74220566|dbj|BAE31497.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT + +AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLAVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|320407243|gb|ADW27397.1| ATP synthase beta subunit [Nephasoma pellucidum]
          Length = 377

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 25/310 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR++N +G+PID      +G +  +  S +    P      VE    +TGI+V+D+  P
Sbjct: 71  LGRIMNVIGEPIDE-----RGPIPSKAFSGIHQEAPEFTEMSVEXEILETGIKVVDLLAP 125

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREV----REFIED- 208
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  
Sbjct: 126 YSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREXNDLYHEMIESG 184

Query: 209 --YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
              L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 185 VIXLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 244

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++   + ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 245 GSEVSALLGRIPSAVGYQPTLATDXGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAP 302

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S+SR+ D     +E   V+ ++  ++   +
Sbjct: 303 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRILDPNVVGEEHXNVARAVQKILQDHK 362

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 363 SLQDIIAILG 372


>gi|148380580|ref|YP_001255121.1| V-type ATPase, B subunit [Clostridium botulinum A str. ATCC 3502]
 gi|153932485|ref|YP_001384867.1| V-type ATP synthase subunit B [Clostridium botulinum A str. ATCC
           19397]
 gi|153937604|ref|YP_001388337.1| V-type ATP synthase subunit B [Clostridium botulinum A str. Hall]
 gi|171769225|sp|A7FWQ6|VATB_CLOB1 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|172047889|sp|A5I556|VATB_CLOBH RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|148290064|emb|CAL84183.1| v-type sodium ATP synthase subunit B [Clostridium botulinum A str.
           ATCC 3502]
 gi|152928529|gb|ABS34029.1| V-type sodium ATPase, B subunit [Clostridium botulinum A str. ATCC
           19397]
 gi|152933518|gb|ABS39017.1| V-type sodium ATPase, B subunit [Clostridium botulinum A str. Hall]
          Length = 461

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G+     G+V+ IN D  +V +     G  +    + F      +  S    GRV +
Sbjct: 34  LHNGEK--RRGKVLEINKDKAMVQLFEGSAGINLKGAKVKFLGKPLELGVSEDMLGRVFD 91

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P DG   +   D  ++I       + R   ++  +TG+  ID    L  GQ++ VF
Sbjct: 92  GLGNPKDGGPKIIP-DKKLDINGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+  + L +  AR      SD    V+ + +G    E + FI+D+     + ++V+ 
Sbjct: 151 SGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210

Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+P  
Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  ++++L  L ER G    ++G+IT +  + +  D+   PI D    I +G I+L+
Sbjct: 271 RGYPGYLYTDLSTLYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L ++G  PP+D L S+SRL DK 
Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKG 355


>gi|302035755|ref|YP_003796077.1| ATP synthase F1 subunit beta [Candidatus Nitrospira defluvii]
 gi|300603819|emb|CBK40151.1| ATP synthase F1, beta subunit [Candidatus Nitrospira defluvii]
          Length = 480

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 159/306 (51%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN LG+P+D    + K   +  I    P   ++    +  +TGI+V+D+  P   G
Sbjct: 93  LGRLINVLGEPVDEKGPI-KAKKTYPIHRPAPRLEDQDTKTEVLETGIKVVDLLEPYSKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------G 211
            ++G+F G+G+GK+ ++     +         + + VGER RE  +   +          
Sbjct: 152 GKVGLFGGAGVGKTVIIMELINNIALHHGGFSVFAGVGERTREGNDLWHEMQESKVIDPD 211

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           D+ K K+ +V    +E P  R    LT + +AE+F   +  +VLL +D+I RF  +  E+
Sbjct: 212 DHTKSKAALVYGQMNEPPGARLRVALTGLAVAEFFRDEENQDVLLFVDNIFRFTQAGSEV 271

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 272 SALLGRMPSAVGYQPNLSTEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAF 329

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LAE G YP VDPL S SR+ D     +E  K+   +  ++ R+++ +D
Sbjct: 330 AHLDATTVLSRQLAELGIYPAVDPLDSTSRILDPQVIGEEHYKVARGVQSVLQRYKDLQD 389

Query: 389 IRLIGG 394
           I  I G
Sbjct: 390 IIAILG 395


>gi|251771544|gb|EES52121.1| ATP synthase F1, beta subunit [Leptospirillum ferrodiazotrophum]
          Length = 462

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 162/303 (53%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNR-QRVEKGFKTGIRVIDIFTP 157
            GR+++ LG PID       G +S E M  +   PPA +      + F+TGI+V+D+  P
Sbjct: 82  LGRMMDVLGAPIDDG-----GPISTEHMRPIHVDPPAFDELASATEVFETGIKVVDLIAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN- 213
              G + G+F G+G+GK+ ++    R+   +     + + VGER RE  +   +      
Sbjct: 137 FAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGVGERTREGNDLWNEMNESKV 196

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
           + K+ +V    +E P +R    LT +  AE+F  + + +VL  +D+I RF  +  E++  
Sbjct: 197 IDKTSLVYGQMNEPPGVRLRVALTGLAQAEFFRDEENRDVLFFVDNIFRFTLAGAEVSAL 256

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V  D+  DP   +  + L
Sbjct: 257 LGRMPSAVGYQPTLAVEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHL 314

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D  +VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   + ++++ +DI  
Sbjct: 315 DATVVLSRQIAELGIYPAVDPLDSTSRILDPMIIGEEHYNVARAVQKTLQKYKDLQDIIA 374

Query: 392 IGG 394
           I G
Sbjct: 375 ILG 377


>gi|258571577|ref|XP_002544592.1| ATP synthase F1, beta subunit [Uncinocarpus reesii 1704]
 gi|237904862|gb|EEP79263.1| ATP synthase F1, beta subunit [Uncinocarpus reesii 1704]
          Length = 521

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGAMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 367

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     D+  +  S +  ++  ++  +DI
Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDDHYQTASRVQQMLQEYKSLQDI 427

Query: 390 RLIGG 394
             I G
Sbjct: 428 IAILG 432


>gi|121282047|gb|ABM53601.1| putative ATP synthase beta chain [uncultured bacterium CBNPD1 BAC
           clone 2089]
          Length = 480

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G V N  G  +D D    +     EI    P     +  ++ F+TGI+VID+ TP   G
Sbjct: 99  LGHVWNVWGDVLDADPKEFENIERWEIHRSAPAFDTLEPSKRMFETGIKVIDLLTPYLAG 158

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKS 217
            +IG+F G+G+GK+ L++ M  R  S      + + VGER RE  +  +E       +K+
Sbjct: 159 GKIGLFGGAGVGKTVLITEMINRVASKHGGVSVFAGVGERTREGTDLRLEMEESGVFEKA 218

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 219 ALVFGQMDEPPGVRLRVALSALTMAEYFRDVQNQDVLLFVDNIFRFVQAGSEVSTLLGRM 278

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + LD   
Sbjct: 279 PSAVGYQPTLADEMGQLQERI--TSTRGRSITSLQAVYVPADDYTDPAPFTTFTFLDATT 336

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A  G YP VDPLAS S +       D   ++   +  ++ R++E +DI  I G
Sbjct: 337 ELSRQIASLGIYPAVDPLASTSTILTPETVGDRHYQVARRVQEILQRYKELQDIIAILG 395


>gi|153938545|ref|YP_001391923.1| V-type ATP synthase subunit B [Clostridium botulinum F str.
           Langeland]
 gi|170754730|ref|YP_001782239.1| V-type ATP synthase subunit B [Clostridium botulinum B1 str. Okra]
 gi|170759006|ref|YP_001787943.1| V-type ATP synthase subunit B [Clostridium botulinum A3 str. Loch
           Maree]
 gi|171769218|sp|A7GGL3|VATB_CLOBL RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|229558011|sp|B1IJM7|VATB_CLOBK RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|238688525|sp|B1KXT5|VATB_CLOBM RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|152934441|gb|ABS39939.1| V-type ATPase, B subunit [Clostridium botulinum F str. Langeland]
 gi|169119942|gb|ACA43778.1| V-type sodium ATPase, B subunit [Clostridium botulinum B1 str.
           Okra]
 gi|169405995|gb|ACA54406.1| V-type sodium ATPase, B subunit [Clostridium botulinum A3 str. Loch
           Maree]
 gi|295319943|gb|ADG00321.1| V-type ATPase, B subunit [Clostridium botulinum F str. 230613]
          Length = 461

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G+     G+V+ IN D  +V +     G  +    + F      +  S    GRV +
Sbjct: 34  LHNGEK--RRGKVLEINKDKAMVQLFEGSAGINLKGAKVKFLGKPLELGVSEDMLGRVFD 91

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P DG   +   D  ++I       + R   ++  +TG+  ID    L  GQ++ VF
Sbjct: 92  GLGNPKDGGPKIIP-DKKLDINGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+  + L +  AR      SD    V+ + +G    E + FI+D+     + ++V+ 
Sbjct: 151 SGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210

Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+P  
Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  ++++L  L ER G    ++G+IT +  + +  D+   PI D    I +G I+L+
Sbjct: 271 RGYPGYLYTDLSTLYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L ++G  PP+D L S+SRL DK 
Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKG 355


>gi|224823532|ref|ZP_03696641.1| ATP synthase F1, beta subunit [Lutiella nitroferrum 2002]
 gi|224603987|gb|EEG10161.1| ATP synthase F1, beta subunit [Lutiella nitroferrum 2002]
          Length = 464

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG P+D    +   +    I    P         +  +TGI+VID+  P 
Sbjct: 80  AATLGRIMDVLGNPVDEAGPVAT-ETRRAIHQPAPKFDELSSATELLETGIKVIDLLCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AE F      + KG +VL  +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEQFRDEKDENGKGRDVLFFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKEGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D     DE   V+  +   + +++E 
Sbjct: 316 TFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVARGVQTTLQKYKEL 375

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 376 RDIIAILG 383


>gi|119350453|gb|ABL63177.1| AtpB [Atractomorpha porcata]
          Length = 391

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 38  GRIFNVLGEPVDNMGPVNNEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 96

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 97  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 156

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 157 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 214

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 215 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 272

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E 
Sbjct: 273 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 331

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 332 QDIIAILG 339


>gi|111018473|ref|YP_701445.1| F0F1 ATP synthase subunit beta [Rhodococcus jostii RHA1]
 gi|118573737|sp|Q0SGP9|ATPB_RHOSR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110818003|gb|ABG93287.1| H(+)-transporting two-sector ATPase beta subunit [Rhodococcus
           jostii RHA1]
          Length = 483

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG   D  D+ G G D     + + PPA ++ +   +  +TGI+VID+ TP   
Sbjct: 105 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 161

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ 
Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 221

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G 
Sbjct: 222 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 281

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 282 MPSAVGYQPTLADEMGELQERI--TSTRGRSITSLQAIYVPADDYTDPAPATTFAHLDAT 339

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L+R +++ G YP VDPL S SR+ +     A+  ++ + +  ++ +++E +DI  I G
Sbjct: 340 TELSRPISQMGIYPAVDPLTSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 399


>gi|73667933|ref|YP_303948.1| V-type ATP synthase subunit B [Methanosarcina barkeri str. Fusaro]
 gi|121732070|sp|Q46FH4|VATB_METBF RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|72395095|gb|AAZ69368.1| H(+)-transporting ATP synthase, subunit B [Methanosarcina barkeri
           str. Fusaro]
          Length = 460

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 179/354 (50%), Gaps = 36/354 (10%)

Query: 60  GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           G+V+  + DIV I       G+ +E  +   VF     ++  S    GR+++  G+P+DG
Sbjct: 42  GEVLDSSSDIVVIQIFEGTTGLDKECGV---VFTGETLKLPASIDLLGRILSGSGEPLDG 98

Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFA 168
                 D  L     +M   +++PP        K F +TGI  ID    L  GQ++ +F+
Sbjct: 99  GPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRGQKLPIFS 150

Query: 169 GSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
            SG+  + +    AR      S+    V+ + +G    E + F+ D+     L+++VV +
Sbjct: 151 ASGLPHNEIALQIARQAAVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFL 210

Query: 222 ATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
             +D+  + R + P  A+T AEY +   G +VL+IL  IT +A ++R++     E+P  R
Sbjct: 211 NLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEIPGRR 270

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP  ++++L  L ER G  +  KG++T +  + + GD+   PI D    I +G IV++R
Sbjct: 271 GYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITEGQIVVSR 330

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSAD----EKKLVSSLTHLIHRFEETRDIR 390
            L  +G YPP++ L S+SRL +    AD    + K VS    +   + E RD+R
Sbjct: 331 ELHRKGIYPPINVLPSLSRLMNSGIGADKTREDHKAVSD--QMYAGYAEGRDLR 382


>gi|48477561|ref|YP_023267.1| V-type ATP synthase subunit B [Picrophilus torridus DSM 9790]
 gi|73920416|sp|Q6L1S8|VATB_PICTO RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|48430209|gb|AAT43074.1| A1AO H+ ATPase subunit B [Picrophilus torridus DSM 9790]
          Length = 460

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 159/322 (49%), Gaps = 11/322 (3%)

Query: 60  GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+  R  L IV I     G   S   + F    FR+  S    GR+ N  G+PID   
Sbjct: 43  GQVLETRNGLSIVQIYGSTTGISTSNASVKFTGSTFRLPVSDDMLGRIFNGFGEPIDNGP 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R+   +  +TGI  ID    L  GQ++ +F+G+G+  + L
Sbjct: 103 KIYSKD-KLDINGSAINPYSREEPSEFVQTGISTIDGMNTLVMGQKLPIFSGAGLSHNRL 161

Query: 178 LSMFARSDCFDK------VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230
            +  AR     K      V+   +G    E   FI ++    +L  SV+ +  + +  + 
Sbjct: 162 AAQIARQAKTLKGGENFGVVFGAIGITSEEANYFINEFQSSGSLSNSVIFLNLASDPSMD 221

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R + P  A+T AEY + + + N+L+IL  +T +  ++REI++   E+P  RGYP  ++++
Sbjct: 222 RIVLPRIALTTAEYLAYEKEMNMLVILTDMTNYCEALREISSARNEIPGRRGYPGYMYTD 281

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  + ER G      G+IT +  + + GD+  +P+ D    I +G I L+R L +   YP
Sbjct: 282 LSTIYERAGKIRGRNGSITQIPILTMPGDDITNPVPDLTGYITEGQITLSRDLNKRNIYP 341

Query: 350 PVDPLASVSRLADKAWSADEKK 371
            VD L S+SRL ++   +D  +
Sbjct: 342 EVDVLLSLSRLMNQGIGSDHTR 363


>gi|284999815|dbj|BAI67808.1| ATP synthase beta-subunit [Chloromonas rubrifilum]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRSAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|83643803|ref|YP_432238.1| F0F1 ATP synthase subunit beta [Hahella chejuensis KCTC 2396]
 gi|83631846|gb|ABC27813.1| ATP synthase F1, beta subunit [Hahella chejuensis KCTC 2396]
          Length = 459

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 10/300 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P A  C GR++N  G+P+DG  ++ + D    I     P            TGI+V+D+ 
Sbjct: 82  PVAESCLGRLLNIFGEPLDGGPAI-ETDHYRNIHHSPAPLNELTAQGDLLPTGIKVVDLL 140

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGD 212
            P   G + G+F G+G+GK+ L+   M A +     V + S +GER RE  E   D    
Sbjct: 141 CPFIRGGKAGLFGGAGVGKTVLIMEFMHAIAHLHQGVSVFSGIGERIREAHELWRDMQDA 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             + ++++V    DESP +R    L+A+  AEYF  S   +VLL++D++ RF  +  E++
Sbjct: 201 GVMDRALLVFGQMDESPGVRFRVSLSALAYAEYFRDSLRRDVLLVMDNVFRFVQAGAEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
           +  G +P   GY  ++ SE+  L +RI  +    G IT+V +V V  D+  DP   ++ S
Sbjct: 261 SLLGRMPATVGYQPTLGSEVAELEDRI--TSSLHGAITSVQAVYVPADDMTDPAVTTILS 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  ++L+R+ A +G YP VDPL S S+  D+    A       ++   + R++E  DI
Sbjct: 319 HLDTSVILSRTQAAKGLYPAVDPLLSGSKAMDRHTLGAAHYTAAEAVRGHLARYKELEDI 378


>gi|21956012|dbj|BAC06376.1| ATP synthase beta-subunit [Vitreochlamys pinguis]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|320409258|gb|ADW27220.1| ATP synthase beta subunit [Terebratalia transversa]
          Length = 365

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 16/282 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+PID    +   D    I    P  ++    ++   TGI+V+
Sbjct: 22  IRIPVGQETLGRIINVIGEPIDERGPI-LTDKRSGIHQDAPEFVDMSVAQEILVTGIKVV 80

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 81  DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 139

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D+  K  +V    +E P  R    LT +++AEYF   +G +VLL +D+I 
Sbjct: 140 MIESGVISLKDDSSKVSLVYGQMNEPPGARARVALTGLSVAEYFRDDEGQDVLLFIDNIF 199

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 200 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 257

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D
Sbjct: 258 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRILD 299


>gi|194033266|ref|YP_002000428.1| ATP synthase CF1 beta subunit [Oedogonium cardiacum]
 gi|156618960|gb|ABU88157.1| ATP synthase CF1 beta subunit [Oedogonium cardiacum]
 gi|186968883|gb|ACC97206.1| CF1 beta subunit of ATP synthase [Oedogonium cardiacum]
          Length = 482

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    + + +  + I    P   +       F++GI+V+D+  P   G 
Sbjct: 98  GRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAFTDLDTRLSIFESGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +ED 
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 216

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 217 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 274

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 275 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 332

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            S LD   VL+R LA +G YP VDPLAS S +       D        +   + R++E +
Sbjct: 333 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDAHYNCAQKVKETLQRYKELQ 392

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 393 DIIAILG 399


>gi|78184081|ref|YP_376516.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9902]
 gi|118573770|sp|Q3AZK5|ATPB_SYNS9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78168375|gb|ABB25472.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9902]
          Length = 487

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + K   +  I  + P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPV-KTKTTAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ER+  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGTLQERV--ASTVEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VLNR+LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSSSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|311696880|gb|ADP99753.1| F0F1 ATP synthase subunit beta [marine bacterium HP15]
          Length = 463

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 13/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N  G P+D        +     + ++PP +  + V     +TGI+ ID+ +P+  G
Sbjct: 93  GRMLNVFGAPVDNQPVPATSE--RRAIHQLPPLLEDRVVRSQILETGIKAIDLLSPIERG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKK 216
            + G+F G+G+GK+ L++    +       +SL   +GER RE  E   + +G+   L+ 
Sbjct: 151 GKTGLFGGAGVGKTVLITELINNTVQQHKGVSLFCGIGERSREAEELYRE-MGEAGVLEN 209

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V++    +E P +R +   TA+T+AEYF   +  +VLL++D+I RF  +  E++   G 
Sbjct: 210 TVMLFGQMNEVPGVRFLIGKTALTMAEYFRDEQHRDVLLLIDNIFRFVQAGSEVSGLLGR 269

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ +EL  L ERI  +      IT+V +V V  D+  DP A  + S L G 
Sbjct: 270 MPSRVGYQPTLATELAELEERI--TSTHSAAITSVQAVYVPADDFTDPAAAHIFSHLSGS 327

Query: 336 IVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +VL+R  A EG YP +DPLAS S  L           +  ++   +  +EE RDI
Sbjct: 328 VVLSRKRASEGLYPAIDPLASSSVMLTPSVVGQRHYDIARAVRRTLAEYEELRDI 382


>gi|194291166|ref|YP_002007073.1| F0F1 ATP synthase subunit beta [Cupriavidus taiwanensis LMG 19424]
 gi|226740184|sp|B3R7L5|ATPB_CUPTR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|193225001|emb|CAQ71012.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus
           taiwanensis LMG 19424]
          Length = 467

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   +L   I  K P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPIASDELRA-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D +    +  ++   +   + R++E RDI  I G
Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILG 385


>gi|302306746|ref|NP_983117.2| ABR169Wp [Ashbya gossypii ATCC 10895]
 gi|299788666|gb|AAS50941.2| ABR169Wp [Ashbya gossypii ATCC 10895]
          Length = 505

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR++N +G PID    +      M I +  PPA   Q  E +  +TGI+V+D+  P   
Sbjct: 119 LGRILNVVGDPIDERGPI-NSKTRMPIHAD-PPAYVEQSTEAEVLETGIKVVDLLAPYAR 176

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212
           G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  
Sbjct: 177 GGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETGV-I 234

Query: 213 NLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           NL+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 235 NLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 294

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 295 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 352

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +    E   + + +   +  ++  +
Sbjct: 353 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATKVQQTLQAYKSLQ 412

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 413 DIIAILG 419


>gi|227874288|ref|ZP_03992476.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227839862|gb|EEJ50304.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 464

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 169/327 (51%), Gaps = 16/327 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG P+D +    + +    I    P    +    +  +TGI+V+D+  P   G 
Sbjct: 89  GRIFNILGNPVD-EKPAPETEERWAIHRPAPSFEEQTPATEILETGIKVVDLICPYAKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+     +       IS+   VGER RE  +   +      L K+ 
Sbjct: 148 KIGLFGGAGVGKTVLIMELIHNVATAHGGISVFTGVGERTREGNDLYGEMKESGVLDKTA 207

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF  +  E++   G +P
Sbjct: 208 LVYGQMNEPPGARMRVALSGLTMAEYFRDVKHQDVLLFIDNIFRFTQAGSEVSALLGRMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 268 SAVGYQPTLATDMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYR 396
           L+R +A +G YP VDPL S SR+       +E   V+  +  ++ R++E +DI  I    
Sbjct: 326 LSRDIASKGIYPAVDPLDSTSRILTPEIVGEEHYQVARGVQQVLQRYKELQDIIAI---- 381

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++   +V +   I +FL QS
Sbjct: 382 MGMDELSEEDKISVFRARKIQNFLSQS 408


>gi|4519290|dbj|BAA75560.1| ATP synthase beta-subunit [Eudorina unicocca]
 gi|4519292|dbj|BAA75561.1| ATP synthase beta-subunit [Eudorina unicocca]
 gi|14020801|dbj|BAB47545.1| ATP synthase beta-subunit [Eudorina unicocca]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|300933624|ref|ZP_07148880.1| F0F1 ATP synthase subunit beta [Corynebacterium resistens DSM
           45100]
          Length = 482

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D +  LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 104 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 161

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 162 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 222 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRM 281

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD   
Sbjct: 282 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+RS+A +G YP V+PL S SR+ +     +   ++   + H++ + +E +DI  I G
Sbjct: 340 ELDRSIASKGIYPAVNPLTSTSRILEPGIVGERHYEVAQRVIHILQKNKELQDIIAILG 398


>gi|238881792|gb|EEQ45430.1| ATP synthase beta chain, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 415

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 29  LGRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 87

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 88  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 146

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 204

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D +    E   + + +   +  ++  +
Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATGVQQTLQAYKSLQ 322

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 323 DIIAILG 329


>gi|313634840|gb|EFS01260.1| ATP synthase F1, beta subunit [Listeria seeligeri FSL N1-067]
 gi|313639460|gb|EFS04314.1| ATP synthase F1, beta subunit [Listeria seeligeri FSL S4-171]
          Length = 456

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 201/403 (49%), Gaps = 28/403 (6%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG   + L +V++ +  I  +  + IGE   L  G +V + GR   +       G
Sbjct: 33  EYETHQG---NYLAEVVQ-HTGINTVSAIAIGEVSGLARGTIVNNLGRPIEVPVGEKVLG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG       ++   I    P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPE-PDTEVKWPIFRSQPKLSELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGRE----VREFIEDYLGDNLKKS 217
            G+F G+G+GKS L+     +        + + VGER RE     +E  E  +   L ++
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNAVFTGVGERVREGIGLYKELEESGV---LPQT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G++
Sbjct: 205 TVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKI 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD  I
Sbjct: 265 PITGGYQSTLSKEVGNFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDSTI 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL RS+A  G +P V+PL S SR  +  +  +    L   +  ++ R+ E ++I  + G 
Sbjct: 323 VLERSIAALGIFPAVNPLQSSSRALNPNFVGERHYNLAVQVKFILQRYMELQEIINVLGI 382

Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
               D   DK+ V++   I +FL Q    S     SE +F EI
Sbjct: 383 AELSD--EDKSLVNRARKIRNFLSQPFYVSEKFTGSEGIFVEI 423


>gi|254421831|ref|ZP_05035549.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335]
 gi|196189320|gb|EDX84284.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335]
          Length = 486

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + S+ I    P  ++ +     F+TGI+V+D+  P  
Sbjct: 95  ATLGRIFNVLGEPVDEKGPV-DAESSLPIHRPAPELVDLETKPAVFETGIKVVDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210
            G ++G+F G+G+GK+ L+     +   +   +S+   VGER RE      EFIE  +  
Sbjct: 154 RGGKVGLFGGAGVGKTVLIQELINNIAKEHSGVSVFGGVGERTREGNDLYNEFIESGVIN 213

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S V  V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 ADDLSQSKVALVYGQMNEPPGARMRVALSALTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +    G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDMGDLQERI--ASTTDGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD    L+R+LA +G YP VDPL S S +       +E      ++   + R++E 
Sbjct: 332 TFAHLDATTTLSRALASKGIYPAVDPLDSTSTMLQPDIVGEEHYGTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|91178128|gb|ABE27299.1| mitochondrial F-ATPase beta subunit [Candida parapsilosis]
          Length = 337

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 28/310 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR+IN  G PID      +G +  +    I ++ P  + +    +  +TGI+V+D+  P 
Sbjct: 20  GRIINVTGDPIDE-----RGPIECKKRNPIHAEPPSFIEQSTAAEVLETGIKVVDLLAPY 74

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE--- 207
             G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E   
Sbjct: 75  ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV 133

Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            +  GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +
Sbjct: 134 INLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQA 191

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP  
Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++
Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYK 309

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 310 SLQDIIAILG 319


>gi|74225421|dbj|BAE31630.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT + +AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLAVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|261403718|ref|YP_003247942.1| ATP synthase, B subunit [Methanocaldococcus vulcanius M7]
 gi|261370711|gb|ACX73460.1| ATP synthase, B subunit [Methanocaldococcus vulcanius M7]
          Length = 470

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 166/332 (50%), Gaps = 16/332 (4%)

Query: 59  LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           +GQV+  R  L +V +     G   +   + F     +I  S    GR+ N  GKPIDG 
Sbjct: 46  MGQVLEAREGLAVVQVFEGTTGLSTNQTRVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGG 105

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  ++I       ++R+      +TGI  ID    L  GQ++ +F+GSG+  + 
Sbjct: 106 PEIVP-EKELDINGYPLNPVSRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 164

Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR            V+ + +G    E   F+E++     L+++VV +  +D+  I
Sbjct: 165 LAAQIARQAKVRGEGEKFAVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLADDPAI 224

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P  A+T+AEY + + D +VL+IL  +T +  ++REI+    E+P  RGYP  +++
Sbjct: 225 ERILTPRLALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMYT 284

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  +   G IT +  + +  D+   PI D    I +G IVL+R L  +G Y
Sbjct: 285 DLATIYERAGRVKGRIGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 344

Query: 349 PPVDPLASVSRLADKAWSA-----DEKKLVSS 375
           PPVD L S+SRLA           D KK+++ 
Sbjct: 345 PPVDVLPSLSRLAGNGQGPGKTREDHKKVINQ 376


>gi|4519304|dbj|BAA75567.1| ATP synthase beta-subunit [Tetrabaena socialis]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID   ++   D ++ I    P   +       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPIDNMGTVFVED-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S+ T    + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQTVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|163787220|ref|ZP_02181667.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteriales
           bacterium ALC-1]
 gi|159877108|gb|EDP71165.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteriales
           bacterium ALC-1]
          Length = 502

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 163/330 (49%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG   L K G+  + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGDLPKAGEAGLPIHRQAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 208 -DYL------GDNLKK----------SVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
            D++      G +LKK          +  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEEGGWDLKKVDKSAMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  L+ R++E +DI  I G
Sbjct: 388 LGDEHYDCAQRVKELLQRYKELQDIIAILG 417


>gi|4519306|dbj|BAA75568.1| ATP synthase beta-subunit [Basichlamys sacculifera]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+PID   ++   D ++ I    P   +       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPIDNMGTVFVED-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S+ T    + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQTVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|4519280|dbj|BAA75555.1| ATP synthase beta-subunit [Volvox globator]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D +  + K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|322704573|gb|EFY96166.1| ATP synthase beta chain [Metarhizium anisopliae ARSEF 23]
          Length = 417

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN  G PID    + K D  + I    P  + +    +   TGI+V+D+  P  
Sbjct: 27  ATLGRIINVTGDPIDERGPI-KTDKFLPIHCDPPEFVAQSTTAEVLVTGIKVVDLLAPYA 85

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 86  RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 144

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 145 QLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDHEGQDVLLFIDNIFRFTQAGAE 204

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 205 VSALLGRIPSAVGYQPTLAVDMGVMQERI--TTTDKGSITSVQAVYVPADDLTDPAPATT 262

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPLAS SR+ D      E     + +  ++  ++  +
Sbjct: 263 FAHLDATTVLSRGISEIGIYPAVDPLASTSRVLDPRIVGQEHYDTATRVQQILQEYKSLK 322

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 323 DIIAILG 329


>gi|298370407|ref|ZP_06981723.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281867|gb|EFI23356.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 465

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 155/307 (50%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+++ LG P+D     G  D +    I    P         +  +TGI+VID+  P  
Sbjct: 83  LGRIVDVLGTPVD---EAGPIDTNKHRAIHQTAPKFDELSATTELLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +T+AEYF      S KG +VL  +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E R
Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|284999817|dbj|BAI67809.1| ATP synthase beta-subunit [Gloeomonas kupfferi]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|119350447|gb|ABL63174.1| AtpB [Ankyra starrii]
          Length = 388

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNMGPVNNEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E 
Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|4519346|dbj|BAA75588.1| ATP synthase beta-subunit [Chlamydomonas moewusii]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   D ++ I  K P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGPVKVED-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   +K  +   ++   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGDKHYQTAQNVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|11559340|dbj|BAB18828.1| ATP synthase beta-subunit [Volvulina steinii]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGTV-KVEETLPIHRTAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E +
Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKELQ 326

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 327 DIIAILG 333


>gi|206603286|gb|EDZ39766.1| ATP synthase F1, beta subunit [Leptospirillum sp. Group II '5-way
           CG']
          Length = 463

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 163/308 (52%), Gaps = 27/308 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNR-QRVEKGFKTGIRVIDIFTP 157
            GR+++ LG P+D       G ++ E    + + PP         + F+TGI+V+D+  P
Sbjct: 83  LGRMMDVLGNPVDE-----AGPITAEARRSIHREPPGFEELASATEVFETGIKVVDLIAP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL 214
              G + G+F G+G+GK+ ++    R+   +     + + VGER RE  +     L + +
Sbjct: 138 FAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGVGERTREGND-----LWNEM 192

Query: 215 KKSVVVVATS------DESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
           K+S V+  TS      +E P +R    LT +T AEYF   +  +VL  +D+I RF  +  
Sbjct: 193 KESKVIDKTSLVYGQMNEPPGVRLRVALTGLTQAEYFRDEERRDVLFFIDNIFRFTLAGA 252

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 253 EVSALLGRMPSAVGYQPTLAVEMGGLQERI--TSTKKGSITSVQAVYVPADDLTDPAPAT 310

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             S LD  +VL+R +AE G YP VDPL S SR+ D     DE   V+ ++   + ++++ 
Sbjct: 311 TFSHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPMIVGDEHYGVARAVQKTLQKYKDL 370

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 371 QDIIAILG 378


>gi|52788859|gb|AAU87399.1| ATP synthase beta chain [Saccoloma inaequale]
          Length = 383

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 160/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVENSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 LQDIIAI----PGLD 311


>gi|298710991|emb|CBJ32298.1| F-type H-ATPase beta subunit [Ectocarpus siliculosus]
          Length = 508

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 18/308 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +        I +  P    + + ++   TGI+V+D+  P   G
Sbjct: 118 LGRIMNVIGEPVDERGPI-NSKAKAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKG 176

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL---- 210
            +IG+F G+G+GK+ ++     +   +     + + VGER RE      E IE  +    
Sbjct: 177 GKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKIT 236

Query: 211 GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
            D+ K  K+ +V    +E P  R    LT +TIAEYF  ++G +VLL +D+I RF  +  
Sbjct: 237 EDSTKGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGA 296

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +
Sbjct: 297 EVSALLGRIPSAVGYQPTLATDMGMLQERI--TSTNKGSITSVQAVYVPADDLTDPAPAT 354

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386
             + LD   VL+R +AE G YP VDPL S SR+ D     DE    +  T  L+  ++  
Sbjct: 355 TFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGL 414

Query: 387 RDIRLIGG 394
           ++I  I G
Sbjct: 415 QEIIAILG 422


>gi|284999821|dbj|BAI67811.1| ATP synthase beta-subunit [Gloeomonas lateperforata]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|255717400|ref|XP_002554981.1| KLTH0F18304p [Lachancea thermotolerans]
 gi|238936364|emb|CAR24544.1| KLTH0F18304p [Lachancea thermotolerans]
          Length = 508

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 28/311 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  +  + +   PPA   Q    +  +TGI+V+D+  P
Sbjct: 122 LGRIINVVGEPIDE-----RGPILTKKRNPIHAEPPAFVEQSTAAEVLETGIKVVDLLAP 176

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207
              G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  
Sbjct: 177 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETG 235

Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
             +  GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  
Sbjct: 236 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQ 293

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP 
Sbjct: 294 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPA 351

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R ++E G YP VDPL S SRL D +    E   + + +   +  +
Sbjct: 352 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATQVQQTLQAY 411

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 412 KSLQDIIAILG 422


>gi|183206582|gb|ACC54489.1| ATP synthase beta subunit [Feeria angustifolia]
          Length = 457

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 9   KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 68

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 69  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 125

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 126 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 184

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 185 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 244

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 245 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 302

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 303 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 362

Query: 389 IRLIGG 394
           I  I G
Sbjct: 363 IITILG 368


>gi|119350451|gb|ABL63176.1| AtpB [Atractomorpha echinata]
          Length = 392

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNMGPVNNEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E 
Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|41408549|ref|NP_961385.1| F0F1 ATP synthase subunit beta [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396907|gb|AAS04768.1| AtpD [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 402

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D     G+      I  K PP    +   +  +TG++V+D+ TP   G 
Sbjct: 23  GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 81

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 82  KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 141

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G +P
Sbjct: 142 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 201

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD    
Sbjct: 202 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 259

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+  +G +P VDPLAS S + D     +E  ++   +  ++ R+++ +DI  I G
Sbjct: 260 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 317


>gi|56477133|ref|YP_158722.1| F0F1 ATP synthase subunit beta [Aromatoleum aromaticum EbN1]
 gi|81357643|sp|Q5P4E2|ATPB_AZOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56313176|emb|CAI07821.1| F1-ATP synthase, beta subunit [Aromatoleum aromaticum EbN1]
          Length = 466

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   +L   I +K P            +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEAGPIEADELR-PIHAKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 269 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+    + + R++E RDI  I G
Sbjct: 327 LSRDIAALGIYPAVDPLDSTSRQLDPLVVGEEHYNVARQVQVTLQRYKELRDIIAILG 384


>gi|23503603|dbj|BAC20398.1| ATP synthase beta-subunit [Chloromonas reticulata]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAETALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|94312425|ref|YP_585635.1| F0F1 ATP synthase subunit beta [Cupriavidus metallidurans CH34]
 gi|118573729|sp|Q1LHL0|ATPB_RALME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|93356277|gb|ABF10366.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 467

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + D    I  K P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPI-EADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D +    +  ++   +   + R++E RDI  I G
Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILG 385


>gi|226360596|ref|YP_002778374.1| F0F1 ATP synthase subunit beta [Rhodococcus opacus B4]
 gi|254808161|sp|C1AVZ9|ATPB_RHOOB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226239081|dbj|BAH49429.1| ATP synthase beta chain [Rhodococcus opacus B4]
          Length = 483

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG   D  D+ G G D     + + PPA ++ +   +  +TGI+VID+ TP   
Sbjct: 105 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 161

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ 
Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 221

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G 
Sbjct: 222 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 281

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 282 MPSAVGYQPTLADEMGELQERI--TSTRGRSITSLQAIYVPADDYTDPAPATTFAHLDAT 339

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L+R +++ G YP VDPL S SR+ +     A+  ++ + +  ++ +++E +DI  I G
Sbjct: 340 TELSRPISQMGIYPAVDPLTSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 399


>gi|330752204|emb|CBL87162.1| ATP synthase subunit beta [uncultured Sphingobacteria bacterium]
 gi|330752246|emb|CBL87203.1| ATP synthase beta subunit [uncultured Sphingobacteria bacterium]
 gi|330752293|emb|CBL87248.1| ATPase, F1 complex, beta subunit [uncultured Sphingobacteria
           bacterium]
          Length = 503

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 165/334 (49%), Gaps = 47/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMS--KVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
           GR+ N +G+PIDG   +G  D+S+   S  + PP       E     TGI+VID+  P  
Sbjct: 90  GRLFNVVGEPIDG---IGPVDMSVNTSSIHRKPPRFEDLSTESEVLFTGIKVIDLIEPYV 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIE----D 208
            G +IG+F G+G+GK+ L+       +  +D + + + VGER RE    +RE +E    +
Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAKGYDGISVFAGVGERTREGNDLLREMLESGIIN 206

Query: 209 YLGDNL--------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF--- 245
           Y  D L                     K+  V    +E P  R    L+ +T+AEY+   
Sbjct: 207 YGEDFLHSMEEGGWDLSKVDKSKLKESKATFVFGQMNEPPGARARVALSGLTLAEYYRDG 266

Query: 246 ----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                + G ++L  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 267 DLTDPNGGKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGLMQERI--TS 324

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT+V +V V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ 
Sbjct: 325 TKRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLDSTSRIL 384

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D A   +E       +  ++ R+ E +DI  I G
Sbjct: 385 DPAIIGEEHYNTAEKVKQILQRYNELQDIIAILG 418


>gi|298373453|ref|ZP_06983442.1| ATP synthase F1, beta subunit [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298274505|gb|EFI16057.1| ATP synthase F1, beta subunit [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 499

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 177/370 (47%), Gaps = 46/370 (12%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGD 123
           I  D V    +   + IS G  V   GR    P      GR++N +G+ IDG   L   +
Sbjct: 52  IGEDTVRCVAMDSTDGISRGMEVESLGRPISMPVGSQVKGRLLNVIGETIDGMKPLDYNE 111

Query: 124 LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178
           +  + + + PP        K    TGI+VID+  P   G +IG+F G+G+GK+ L+    
Sbjct: 112 I--QSIHRDPPKFEDLSTSKEILFTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELI 169

Query: 179 -SMFARSDCFDKVIISLVGERGRE----VREFIEDYL---GDNLKKSV------------ 218
            ++  + + F   + + VGER RE    +RE IE  +   G+  KKS+            
Sbjct: 170 NNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRYGEEFKKSMEKGDWDLSKVDY 227

Query: 219 ---------VVVATSDESPILRKMAPLTAVTIAEYF----SSKGDNVLLILDSITRFAHS 265
                    +V    +E P  R    L+ +TIAE F     + G+++L  +D+I RF  +
Sbjct: 228 DELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDSGGTGGNDILFFIDNIFRFTQA 287

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  + ERI  +  + G+IT+V +V V  D+  DP  
Sbjct: 288 GSEVSALLGRMPSAVGYQPTLASEMGIMQERI--TSTKNGSITSVQAVYVPADDLTDPAP 345

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384
            +  S LD   VL+R ++E G YP VDPL S SR+ D      D       +  L+ R++
Sbjct: 346 ATTFSFLDATTVLDRKISELGIYPAVDPLESTSRILDPNIVGEDHYNTAQRVKQLLQRYK 405

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 406 ELQDIIAILG 415


>gi|227503869|ref|ZP_03933918.1| F0F1 ATP synthase subunit beta [Corynebacterium striatum ATCC 6940]
 gi|227199492|gb|EEI79540.1| F0F1 ATP synthase subunit beta [Corynebacterium striatum ATCC 6940]
          Length = 481

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 165/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D    LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-QPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A +G YP V+PL S SR+ + +   +   ++   + H++ + +E +DI  I G
Sbjct: 339 ELDRGIASKGIYPAVNPLTSTSRILEPSIVGEHHYEVAQRVIHILQKNKELQDIIAILG 397


>gi|149384745|gb|ABR25181.1| ATP synthase beta chain [Saccoloma inaequale]
          Length = 426

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVENSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 333 LQDIIAI----PGLD 343


>gi|158524730|gb|ABW71259.1| mitochondrial ATP synthase beta subunit [Plumatella repens]
          Length = 428

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 19/315 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI       GR+IN +G+PID    + K D  + I  + P  ++     +   TGI+V+D
Sbjct: 56  RIPVGPETLGRIINVIGEPIDERGPV-KTDKFLPIHQEAPEFVDMSVQAEILVTGIKVVD 114

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+ +GK+ L+    +  A++     V    VGER RE     RE 
Sbjct: 115 LLAPYAKGGKIGLFGGASVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYREM 173

Query: 206 IE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
           IE    D  G    K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 174 IEGGVIDLKGKG-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D       +  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRILDANVIGQDHYDTARGVQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 351 LQDYKSLQDIIAILG 365


>gi|326382094|ref|ZP_08203787.1| F0F1 ATP synthase subunit beta [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199520|gb|EGD56701.1| F0F1 ATP synthase subunit beta [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 481

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG   D  D+ G G D     + + PPA ++ +   +  +TGI+VID+ TP   
Sbjct: 103 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 159

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ 
Sbjct: 160 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 219

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 220 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGR 279

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  ++    +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 280 MPSAVGYQPTLADEMGELQERITSTKGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 337

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             L+R +++ G YP VDPL S SR+ + +   DE  ++ + +  ++ +++E +DI  I G
Sbjct: 338 TELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 397


>gi|8050870|gb|AAF71787.1|AF266738_1 ATP synthase beta subunit [Arbutus unedo]
          Length = 494

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +  +     F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIELETKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     RE  E 
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYREMKES 215

Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +    N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 216 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 275

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 276 QAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 333

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +  +    DE  K+   +   + R
Sbjct: 334 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRWIVGDEHYKIAQRVKQTLQR 393

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 394 YKELQDIITILG 405


>gi|11559344|dbj|BAB18830.1| ATP synthase beta-subunit [Pandorina morum]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D +  + K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|23503613|dbj|BAC20403.1| ATP synthase beta-subunit [Chloromonas serbinowi]
          Length = 376

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRSAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKRTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|309798527|ref|ZP_07692804.1| ATP synthase F1, beta subunit [Streptococcus infantis SK1302]
 gi|308117846|gb|EFO55245.1| ATP synthase F1, beta subunit [Streptococcus infantis SK1302]
          Length = 360

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 143/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE
Sbjct: 24  LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 83

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + + E      ++K+ +V    +E P  R    LT +TIAEYF   +G +VLL +D+I
Sbjct: 84  GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 143

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D+
Sbjct: 144 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 201

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L R L + G YP VDPLAS SR LA +    +   + + +  
Sbjct: 202 YTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKR 261

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ E +DI  I G
Sbjct: 262 VLQRYHELQDIIAILG 277


>gi|288574840|ref|ZP_06393197.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570581|gb|EFC92138.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 470

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GRV N  G+PIDG   +   D ++++        +R   E+  +TGI  ID   P
Sbjct: 83  SEDMLGRVFNGRGEPIDGGAHI-IADKNIDVNGLPINPFSRDYPEEFIQTGISTIDGMNP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYL 210
           +  GQ++ +F+G+G+  + + +  AR        + F  V+ + +G    E   F+ED+ 
Sbjct: 142 MVRGQKLPIFSGAGLPHNRMAAQLARQANVISGHEAF-AVVFAAMGITFEEASFFMEDFR 200

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               L+++V+ V  +D+  I R   P  A+T AEY +  K  +VL+IL  +T +  ++RE
Sbjct: 201 RTGALERTVMYVNLADDPAIERITTPRLALTAAEYLAFEKNMHVLVILTDLTNYCEALRE 260

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+    E+P  RGYP  ++++L  + ER G  +   G+IT V  + +  ++   PI D  
Sbjct: 261 ISAARKEVPGRRGYPGYLYTDLATMYERAGKIKGRSGSITQVPILTMPENDKTHPIPDLT 320

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRF 383
             I +G I+L+ +L  +G YPPVD + S+SRL DK         D   L++ L     R 
Sbjct: 321 GYITEGQIILSPNLHRKGIYPPVDVMPSLSRLKDKGIGKGKTREDHADLMNQLFAAYARG 380

Query: 384 EETRDIRLIGG 394
           +E +++ +I G
Sbjct: 381 KEAKELAVILG 391


>gi|320532886|ref|ZP_08033656.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134898|gb|EFW27076.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 478

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 163/304 (53%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G V N  G  ++    LG G+  +E+     + + PPA ++ +  E+ F+TGI+VID+ T
Sbjct: 99  GHVFNVTGDVLN----LGPGE-QLEVTERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    +   +S+   VGER RE  + I E     
Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SRL    +   E   V++ +  ++ + +E +DI 
Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391

Query: 391 LIGG 394
            I G
Sbjct: 392 AILG 395


>gi|91178140|gb|ABE27305.1| mitochondrial F-ATPase beta subunit [Candida zeylanoides]
          Length = 337

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 163/310 (52%), Gaps = 26/310 (8%)

Query: 102 CGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR+IN  G PID     +S  +  +  +  S V  + N + +E    TGI+V+D+  P 
Sbjct: 19  LGRIINVTGDPIDERGPIESTQRNPIHADPPSFVEQSTNAEVLE----TGIKVVDLLAPY 74

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE--- 207
             G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E   
Sbjct: 75  ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV 133

Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            +  GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +
Sbjct: 134 INLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQA 191

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP  
Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SRL D A    E   + S++   +  ++
Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASNVQQTLQAYK 309

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 310 SLQDIIAILG 319


>gi|183206544|gb|ACC54470.1| ATP synthase beta subunit [Campanula mollis]
          Length = 467

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 89  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 205 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 265 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IITILG 388


>gi|320586098|gb|EFW98777.1| alpha-glucan branching enzyme [Grosmannia clavigera kw1407]
          Length = 1204

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 103  GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
            GR++N  G PID    + K D+   I ++ P    +    +   TGI+V+D+  P   G 
Sbjct: 817  GRIMNVTGDPIDERGPI-KTDMRRSIHAEAPAFTEQSTTAEILVTGIKVVDLLAPYARGG 875

Query: 163  RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         D
Sbjct: 876  KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQLD 934

Query: 213  NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 935  GDSKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 994

Query: 272  NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  + 
Sbjct: 995  LLGRIPSAVGYQPTLAVDMGLMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAH 1052

Query: 332  LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI 
Sbjct: 1053 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDDHYNTATRVQQILQEYKSLQDII 1112

Query: 391  LIGG 394
             I G
Sbjct: 1113 AILG 1116


>gi|27364454|ref|NP_759982.1| F0F1 ATP synthase subunit beta [Vibrio vulnificus CMCP6]
 gi|37681435|ref|NP_936044.1| F0F1 ATP synthase subunit beta [Vibrio vulnificus YJ016]
 gi|320154858|ref|YP_004187237.1| ATP synthase subunit beta [Vibrio vulnificus MO6-24/O]
 gi|81756325|sp|Q7MGI0|ATPB_VIBVY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81844741|sp|Q8DDG8|ATPB_VIBVU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27360573|gb|AAO09509.1| ATP synthase F1, beta subunit [Vibrio vulnificus CMCP6]
 gi|37200187|dbj|BAC96015.1| F0F1-type ATP synthase, beta subunit [Vibrio vulnificus YJ016]
 gi|319930170|gb|ADV85034.1| ATP synthase beta chain [Vibrio vulnificus MO6-24/O]
          Length = 467

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 151/304 (49%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  +L   I    P    +    +  +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDERGEIGAEEL-YSIHRPAPSYEEQSNATELLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +     
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNIEK 204

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E       +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDTARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|23503605|dbj|BAC20399.1| ATP synthase beta-subunit [Chloromonas insignis]
          Length = 376

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|302901641|ref|XP_003048480.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729413|gb|EEU42767.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 514

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K D  + I  + P  + +    +   TGI+V+D+  P   G
Sbjct: 126 LGRIMNVTGDPIDERGPI-KSDKRLPIHQEAPEFVEQSTSAEILVTGIKVVDLLAPYARG 184

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 185 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQL 243

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 244 DGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 303

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 304 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 361

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 362 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGQDHYDTATRVQQILQEYKSLQDI 421

Query: 390 RLIGG 394
             I G
Sbjct: 422 IAILG 426


>gi|183206542|gb|ACC54469.1| ATP synthase beta subunit [Campanula edulis]
          Length = 466

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 89  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 205 NFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 265 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IITILG 388


>gi|325285955|ref|YP_004261745.1| ATP synthase F1 subunit beta [Cellulophaga lytica DSM 7489]
 gi|114545|sp|P13357|ATPB_CYTLY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145031|gb|AAA23334.1| ATP-synthetase beta subunit [Cellulophaga lytica]
 gi|324321409|gb|ADY28874.1| ATP synthase F1, beta subunit [Cellulophaga lytica DSM 7489]
          Length = 502

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G   + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGNLPKSGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEEGGWDLSKVDKSVMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR LA + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILAPEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              D       +  L+ R++E +DI  I G
Sbjct: 388 LGKDHYSCAQRVKELLQRYKELQDIIAILG 417


>gi|330991787|ref|ZP_08315737.1| ATP synthase subunit beta [Gluconacetobacter sp. SXCC-1]
 gi|329761255|gb|EGG77749.1| ATP synthase subunit beta [Gluconacetobacter sp. SXCC-1]
          Length = 468

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 26/311 (8%)

Query: 103 GRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR++N +G+PID      ++G+  +      +  PA + Q        TGI+V+D+  P 
Sbjct: 80  GRILNVIGEPIDDRGPVQAVGRSSIH-----RAAPAFDEQAAATEILPTGIKVVDLLCPY 134

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL----- 210
             G ++G+F G+G+GK+ ++     +       +S+   VGER RE  +   +       
Sbjct: 135 LKGGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVI 194

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
              G++ + S V  V    +E P  R    L+ VT+AEYF   +G +VL  +D+I RF  
Sbjct: 195 KINGESTEGSKVALVYGQMNEPPGARARVALSGVTVAEYFRDVEGQDVLFFVDNIFRFTQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP 
Sbjct: 255 AGAEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             +  + LD   VLNRS+AE G YP VDPL S SR  D     DE   V+  +  ++  +
Sbjct: 313 PAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGDEHYQVARDVQRILQTY 372

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 373 KSLQDIIAILG 383


>gi|227537606|ref|ZP_03967655.1| H(+)-transporting two-sector ATPase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227242492|gb|EEI92507.1| H(+)-transporting two-sector ATPase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 500

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 172/358 (48%), Gaps = 49/358 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N +G  IDG ++L K   +   +  VPP       E     TGI+VID+  P   G
Sbjct: 89  GRVFNVVGDAIDGIENLDK--TNGRPIHNVPPKFEDLSTESEVLFTGIKVIDLLEPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 206

Query: 208 DYLGDNLKKS-----------------VVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+  + ++K                    V    +E P  R    L+ +T+AEYF     
Sbjct: 207 DHFMEGMEKGEWPLETVDQELMKESKCTFVFGQMNEPPGARARVALSGLTVAEYFRDGEG 266

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G
Sbjct: 267 DGQGKDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKNG 324

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+   A 
Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSPAV 384

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
             DE       +  ++ R++E +DI  I     G+D + +   + VH+   +  FL Q
Sbjct: 385 LGDEHYNTAQRVKEILQRYKELQDIIAI----LGMDELSEEDKQTVHRARRVQRFLSQ 438


>gi|183220215|ref|YP_001838211.1| F0F1 ATP synthase subunit beta [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910333|ref|YP_001961888.1| F0F1 ATP synthase subunit beta [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|226740649|sp|B0SDA5|ATPB_LEPBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740650|sp|B0SLC8|ATPB_LEPBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167775009|gb|ABZ93310.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778637|gb|ABZ96935.1| ATP synthase F1, beta subunit [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 468

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID    L K    M I    P     +   + F+TGI+VID+  P   G
Sbjct: 89  LGRIFNVLGEAIDELGDLPKDVKKMPIHRNAPTYEEIKPKTEIFETGIKVIDLLAPYIKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ L+     +         + + VGER RE  +   +      + K+
Sbjct: 149 GKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFAGVGERTREGNDLWNEMKESGVIDKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
           V+     +E P  R    L+A+T+AE F  + G ++LL +D+I RF+ +  E++   G +
Sbjct: 209 VLCFGQMNEPPGARLRVALSALTMAENFRDESGSDILLFVDNIFRFSQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +   +G+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 269 PSAVGYQPTLSTEMGGLQERI--TSTTRGSITSVQAIYVPADDLTDPAPATAFTHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R+++E+G YP VDPL S SR+ +     +E       +  ++ R+++ +DI  I G
Sbjct: 327 VLSRAISEKGIYPAVDPLDSTSRIMNPQIVGEEHYSTAREVQRILQRYKDLQDIIAILG 385


>gi|121602257|ref|YP_988452.1| F0F1 ATP synthase subunit beta [Bartonella bacilliformis KC583]
 gi|190358257|sp|A1UR49|ATPB_BARBK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120614434|gb|ABM45035.1| ATP synthase F1, beta subunit [Bartonella bacilliformis KC583]
          Length = 537

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 166/332 (50%), Gaps = 27/332 (8%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQR 140
           G  VF  G     P      GR++N +G+P+D  G     K   +  I  K P  + +  
Sbjct: 125 GQKVFDTGTQICVPVGEATLGRIMNVIGEPVDEVGPIVTTK---TRSIHQKAPEYIEQST 181

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVG 196
             +   TGI+V+D+  P   G ++G+F G+G+GK+ L+    +  A++     V    VG
Sbjct: 182 ESEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VG 240

Query: 197 ERGRE----VREFIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAE 243
           ER RE      E IE  +  N K         K  +V    +E P  R    L+ +TIAE
Sbjct: 241 ERTREGNDLYYEMIESRVNVNPKENDGSTKGSKCALVYGQMNEPPGARARVALSGLTIAE 300

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 301 NFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTK 358

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D 
Sbjct: 359 TGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDP 418

Query: 364 AWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
               +E   V+  +  ++ R++  +DI  I G
Sbjct: 419 LVVGEEHYAVACQVQTILQRYKALQDIIAILG 450


>gi|46116940|ref|XP_384488.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor
           [Gibberella zeae PH-1]
          Length = 513

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G PID    + K D  + I ++ P  + +    +   TGI+V+D+  P  
Sbjct: 123 ATLGRIMNVTGDPIDERGPI-KTDKRLPIHTEAPEFVEQSTSAEVLVTGIKVVDLLAPYA 181

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 182 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 240

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +T+AEYF  ++G +VLL +D+I RF  +  E
Sbjct: 241 QLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDAEGQDVLLFIDNIFRFTQAGSE 300

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   + 
Sbjct: 301 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPAPATT 358

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D +    +     + +  ++  ++  +
Sbjct: 359 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGQEHYDTATRVQQILQEYKSLQ 418

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 419 DIIAILG 425


>gi|154484982|ref|ZP_02027430.1| hypothetical protein EUBVEN_02700 [Eubacterium ventriosum ATCC
           27560]
 gi|149733935|gb|EDM50054.1| hypothetical protein EUBVEN_02700 [Eubacterium ventriosum ATCC
           27560]
          Length = 468

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 152/293 (51%), Gaps = 9/293 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  +D  + L  G+    I    P   ++  V +  +TGI+VID+  P   G 
Sbjct: 86  GRLFNVLGDTLDNGEKL-DGEQHWCIHRDPPSFEDQSPVVEVLETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+     +         I + VGER RE  + + E      L K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELITNIATQHGGYSIFTGVGERSREGNDLWTEMKESGVLDKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   +  NVLL +D+I RF  +  E++   G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGSEVSALLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R + E+G YP VDPL S SR+ ++     E  +    +  ++ ++ E +DI
Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETARRVQEILQKYTELQDI 375


>gi|288574942|ref|ZP_06393299.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570683|gb|EFC92240.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 455

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 196/417 (47%), Gaps = 35/417 (8%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR--FRISPSACWCG 103
           G+ V  +       GQ+++I  D+  I        +S GD      R   ++       G
Sbjct: 30  GELVTVENGKRTRKGQILQIEGDLCVIQLFDGAMGLSTGDTTVWMDRDVVKVPVGMNLIG 89

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQ 162
           +++N  G    G++ L   D     +S +P    R+R  + F +TGI  ID+   L  GQ
Sbjct: 90  KILNGRGLDERGEEILFCEDRIP--VSGLPINPARRRSPRSFIQTGISTIDVMNTLVKGQ 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDN-LKK 216
           ++ +FAGSG+  + + +   R     +     V+ + +G   RE + FIE +     ++K
Sbjct: 148 KLPIFAGSGLPANEVTTQIVRQAKVRESSQFLVVFAAMGITKRESQYFIESFKRTGAIEK 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGE 275
            V  +  + +S   R + P  A+T+AEYF+  KG +VL+++  +  + +++REI+    E
Sbjct: 208 GVFFLNLASDSAAERLLTPRMALTVAEYFAFQKGYDVLVVMTDMLHYCNALREISAAREE 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P  RGYP  ++S+L  L ER G  +   G+IT +  + +  D+   P+ D    I +G 
Sbjct: 268 VPGRRGYPGYMYSDLADLYERAGSIDGSDGSITQIPIITMPDDDMTHPVIDLSGYITEGQ 327

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-----KKLVSSLTHLIHRFEETRDIR 390
           IVL R L ++G +PP+D L S+SRL +K    D+     + +   L     +  E   +R
Sbjct: 328 IVLGRDLHDKGIFPPIDVLPSLSRLMNKGIGKDQTVDYHRAMADQLYSAYAKARELVKLR 387

Query: 391 LIGGYRPGVDLILDKAVHQVPIIY---------DFLKQSPSDLSSEDVFQEITKKLQ 438
           LI G         D  + ++   Y         +F+ Q   D + ED  +E  + L+
Sbjct: 388 LIVG---------DDGLTEIEHRYIAFGRSFEENFIDQRGGDRNLEDSLEEAWRALR 435


>gi|4519272|dbj|BAA75551.1| ATP synthase beta-subunit [Volvox aureus]
 gi|21956000|dbj|BAC06370.1| ATP synthase beta-subunit [Volvox aureus]
 gi|21956002|dbj|BAC06371.1| ATP synthase beta-subunit [Volvox aureus]
          Length = 376

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E +
Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKELQ 326

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 327 DIIAILG 333


>gi|254292529|ref|YP_003058552.1| ATP synthase F1 subunit beta [Hirschia baltica ATCC 49814]
 gi|254041060|gb|ACT57855.1| ATP synthase F1, beta subunit [Hirschia baltica ATCC 49814]
          Length = 475

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +   +    I +  P  +++    +   TGI+VID+  P  
Sbjct: 85  ATLGRIMNVIGEPIDEAGEIATSE-RRAIHASAPDFVDQNPESEVLATGIKVIDLLCPYA 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVR----EFIEDYL-- 210
            G +IG+F G+G+GK+ L+       +  +    + + VGER RE      E IE  +  
Sbjct: 144 KGGKIGLFGGAGVGKTVLIMELINNIAKAYGGYSVFAGVGERTREGNDLYWEMIESKVNE 203

Query: 211 --GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
             G    ++ +V    +E P  R    LT +  AEYF   +G +VL  +D+I RF  +  
Sbjct: 204 EGGGGDSRATLVYGQMNEPPGARARVALTGLAQAEYFRDEEGKDVLFFVDNIFRFTQAGS 263

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +
Sbjct: 264 EVSALLGRIPSAVGYQPTLATDMGGLQERI--TSTHKGSITSVQAIYVPADDLTDPAPAT 321

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD   VLNR+++E+G YP VDPL S SR+       +E   VS  +  ++ +++E 
Sbjct: 322 SFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILSADVVGEEHYQVSRDVQEILQKYKEL 381

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 382 QDIIAILG 389


>gi|87123626|ref|ZP_01079476.1| ATP synthase F1, beta subunit [Synechococcus sp. RS9917]
 gi|86168195|gb|EAQ69452.1| ATP synthase F1, beta subunit [Synechococcus sp. RS9917]
          Length = 487

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I  + P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPV-NATATAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ER+  + +  G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERVASTVE--GSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VLNR+LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|319409367|emb|CBI83011.1| ATP synthase beta chain [Bartonella schoenbuchensis R1]
          Length = 536

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 23/330 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  VF  G     P      GR++N +G+P+D    +     +  I  + P  + +    
Sbjct: 124 GQKVFDTGTQICVPVGEATLGRIMNVVGEPVDNAGPI-IATKTRSIHQEAPEYVEQSTES 182

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198
           +   TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER
Sbjct: 183 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGER 241

Query: 199 GRE----VREFIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE      E IE  +  N K         K  +V    +E P  R    L+ +T+AE F
Sbjct: 242 TREGNDLYYEMIESRVNVNPKDNKGSAAGSKCALVYGQMNEPPGARARVALSGLTVAESF 301

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D++ RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G
Sbjct: 302 RDEGQDVLFFVDNMFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKTG 359

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+R++AE+G YP VDPL S SR+ D   
Sbjct: 360 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAIAEKGIYPAVDPLDSSSRMLDPMV 419

Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             +E   V+  +  ++ R++  +DI  I G
Sbjct: 420 VGEEHYAVACQVQTILQRYKSLQDIIAILG 449


>gi|187778787|ref|ZP_02995260.1| hypothetical protein CLOSPO_02382 [Clostridium sporogenes ATCC
           15579]
 gi|187772412|gb|EDU36214.1| hypothetical protein CLOSPO_02382 [Clostridium sporogenes ATCC
           15579]
          Length = 461

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 166/328 (50%), Gaps = 19/328 (5%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G+     G+V+ IN D  +V +     G  I    + F      +  S    GRV +
Sbjct: 34  LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91

Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
            LG P DG   +    K D+S   ++ V     R   ++  +TG+  ID    L  GQ++
Sbjct: 92  GLGNPKDGGPKIIPDEKRDISGIPINPVA----RNYPDEFIQTGVSAIDGLNTLVRGQKL 147

Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
            VF+GSG+  + L +  AR      SD    V+ + +G    E + FI+D+     + ++
Sbjct: 148 PVFSGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRA 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+ +  +++  I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+
Sbjct: 208 VLFINLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEV 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  RGYP  ++++L  L ER G     +G+IT +  + +  D+   PI D    I +G I
Sbjct: 268 PGRRGYPGYLYTDLSTLYERAGRILGREGSITQIPILTMPEDDKTHPIPDLTGYITEGQI 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +L+R L ++G  PP+D L S+SRL DK 
Sbjct: 328 ILSRELYKKGIMPPIDVLPSLSRLKDKG 355


>gi|46906331|ref|YP_012720.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47092227|ref|ZP_00230019.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|226222730|ref|YP_002756837.1| ATP synthase beta chain [Listeria monocytogenes Clip81459]
 gi|254826285|ref|ZP_05231286.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J1-194]
 gi|254851740|ref|ZP_05241088.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           R2-503]
 gi|254933110|ref|ZP_05266469.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes
           HPB2262]
 gi|254991771|ref|ZP_05273961.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-064]
 gi|255519884|ref|ZP_05387121.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J1-175]
 gi|300766019|ref|ZP_07075989.1| ATP synthase F1 [Listeria monocytogenes FSL N1-017]
 gi|81565984|sp|Q724W4|ATPB1_LISMF RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|46879595|gb|AAT02897.1| ATP synthase F1, beta subunit [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47019429|gb|EAL10170.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|225875192|emb|CAS03886.1| Putative ATP synthase beta chain [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258605032|gb|EEW17640.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           R2-503]
 gi|293584668|gb|EFF96700.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes
           HPB2262]
 gi|293595524|gb|EFG03285.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J1-194]
 gi|300513277|gb|EFK40354.1| ATP synthase F1 [Listeria monocytogenes FSL N1-017]
 gi|328468429|gb|EGF39435.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 1816]
 gi|332310505|gb|EGJ23600.1| ATP synthase subunit beta [Listeria monocytogenes str. Scott A]
          Length = 456

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYHTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG       ++   I    P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPEPA-AEVKWPIFRDQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F     + VGER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNSVF-----TGVGERVREGIGLYKELEASGVLP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L + +  ++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAAQVKFILQRYMELQEIINVL 380

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K VH+   I +FL Q    S     +E  F EI
Sbjct: 381 GMAELSDED-RKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEI 423


>gi|284047571|ref|YP_003397910.1| H(+)-transporting two-sector ATPase [Acidaminococcus fermentans DSM
           20731]
 gi|283951792|gb|ADB46595.1| H(+)-transporting two-sector ATPase [Acidaminococcus fermentans DSM
           20731]
          Length = 463

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 169/328 (51%), Gaps = 17/328 (5%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +HQ       G+V+ ++ D  +V +     G + +     F     ++  S    GRV +
Sbjct: 32  IHQANGELRKGKVLTVDGDKALVQLFEDSQGLQPATAKARFLGHGIQLGVSPAMLGRVFD 91

Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
            +G PIDG  ++      D++ E M+   PA  R+   +  +TG+  ID    L  GQ++
Sbjct: 92  GMGSPIDGGPAIIPEEYKDINGEPMN---PAA-REYPSEFIQTGVSAIDGLNTLVRGQKL 147

Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217
            VF+GSG+  + L +  AR      +D    V+ + VG    E   F++D+     L ++
Sbjct: 148 PVFSGSGLPHAQLAAQIARQARVRGTDEKFAVVFAAVGITFEEANFFMQDFNRTGALSRA 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
           V+ +  +++  + R   P  A+T AEY + + D +VL+I+  IT +A ++RE++    E+
Sbjct: 208 VMFINLANDPAVERIATPRMAITAAEYLAFELDMHVLVIITDITNYADALREVSAARKEV 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  RGYP  ++++L  + ER G    +KG+IT +  + +  D+   PI D    I +G I
Sbjct: 268 PGRRGYPGYLYTDLATMYERAGRIRGKKGSITMIPILSMPEDDKTHPIPDLTGYITEGQI 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +L+R L  +G  PP+D L S+SRL DK 
Sbjct: 328 ILSRELYRKGLTPPIDVLPSLSRLKDKG 355


>gi|294789023|ref|ZP_06754263.1| ATP synthase F1, beta subunit [Simonsiella muelleri ATCC 29453]
 gi|294483125|gb|EFG30812.1| ATP synthase F1, beta subunit [Simonsiella muelleri ATCC 29453]
          Length = 465

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG P+D    +G  + +  I    P         +  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPVDEAGPIGSNE-TRAIHQPAPKFDELSSATELLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268
            K  +V    +E P  R    LT +++AE+F      + KG +VL  +D+I R+  +  E
Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E R
Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|213026879|ref|ZP_03341326.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 174

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 107/168 (63%), Gaps = 2/168 (1%)

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+
Sbjct: 1   AAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPL 58

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
           AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   +  ++
Sbjct: 59  ADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQ 118

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E
Sbjct: 119 EVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIE 166


>gi|46909233|gb|AAT06134.1| ATP synthase beta subunit [Patiria miniata]
          Length = 427

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 17/315 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR+IN +G+ ID    +   D    I  + P  +     ++   TGI+V+
Sbjct: 55  IRIPVGPETLGRIINVIGESIDERGPI-PTDRRAAIHQEAPEFVEMNVAQEILVTGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 173 MIEGGVISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + E I  +  +KG+IT+V ++ V  D+ 
Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQEII--TTTKKGSITSVQAIYVPADDL 290

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     DE   V+  +  +
Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNVVGDEHYSVARGVQKI 350

Query: 380 IHRFEETRDIRLIGG 394
           +  +   +DI  I G
Sbjct: 351 LQDYRSLQDIIAILG 365


>gi|269986888|gb|EEZ93164.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 460

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLDIVYICPVG--IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+  N D+  I   G   G       + F    F++  S    GRV + LG+P DG  
Sbjct: 43  GQVLATNEDVTIIQVFGETTGMNTKGTKVKFKGTTFKMPVSMDMVGRVFDGLGRPRDGGI 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M+I         R+   +  +TGI  ID    L  GQ++ +F+GSG+  + L
Sbjct: 103 PIF-SDEKMDINGNPINPYAREEPSEFVQTGISSIDCMNTLVRGQKLPIFSGSGLSHNKL 161

Query: 178 LS-------MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +       + A    F  V+   +G    +   FI ++     L+KSV+ +  + +  +
Sbjct: 162 AAQIVKQAKILAEKQNF-YVVFGGIGINSEDANFFINEFQNSGALEKSVIFLNLAADPSM 220

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P  A+T AEY +  KG +V++IL  +T +A ++REI+    E+P  RGYP  +++
Sbjct: 221 ERVILPRLALTTAEYLAYEKGSHVIVILTDMTNYAEALREISAARDEVPGRRGYPGYMYT 280

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G  + ++G++T +  + +  D+   PI D    I +G IVL+R+L + G Y
Sbjct: 281 DLASLFERAGKVKGKEGSVTQLPILTMPSDDITHPIPDLTGYITEGQIVLSRALDKSGIY 340

Query: 349 PPVDPLASVSRLADKA 364
           P VD L S+SRL ++ 
Sbjct: 341 PEVDVLLSLSRLMNQG 356


>gi|296137183|ref|YP_003644425.1| ATP synthase F1, beta subunit [Thiomonas intermedia K12]
 gi|295797305|gb|ADG32095.1| ATP synthase F1, beta subunit [Thiomonas intermedia K12]
          Length = 471

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 166/333 (49%), Gaps = 11/333 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G LV + G   ++       GR+++ LG+PID    +   D    
Sbjct: 61  VVRTIAMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPIAT-DERRS 119

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I    P   +        +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 120 IHQSAPKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 179

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
                 V    VGER RE  +F  +    N L K  +V    +E P  R    LT +T+A
Sbjct: 180 QHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMA 238

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  
Sbjct: 239 ERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQERI--TST 296

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 297 KTGSITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQID 356

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                +E      ++  ++ R++E RDI  I G
Sbjct: 357 PNVIGEEHYSTTRAVQGILQRYKELRDIIAILG 389


>gi|213401040|gb|ACJ47168.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of
           Armadillidium vulgare]
          Length = 309

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 20/288 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ ID    L KG   +E + + PP+   Q++ E+   TGI+VID   P   G
Sbjct: 18  GRIFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDFLAPYLKG 76

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++      F   + + VGER RE  +   + +  N+  
Sbjct: 77  GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVID 134

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267
                  ++V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  +  
Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  + ERI  +    G+IT++ ++ V  D+  DP   +
Sbjct: 195 ELSALLGRIPSAVGYQPTLATDMGAMQERI--ASTTAGSITSIQAIYVPADDLTDPAPAT 252

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
             S LD   VL+R +AE G YP VDPL S S+        +E   V+S
Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300


>gi|16799215|ref|NP_469483.1| F0F1 ATP synthase subunit beta [Listeria innocua Clip11262]
 gi|81595494|sp|Q92FG8|ATPB1_LISIN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|16412557|emb|CAC95371.1| lin0138 [Listeria innocua Clip11262]
          Length = 456

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 196/404 (48%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVINLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG     + ++   I  + P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGLPE-PEAEVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F  V     GER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYNELESSGVLP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K VH+   I +FL Q    S     +E +F EI
Sbjct: 381 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423


>gi|164424839|ref|XP_963253.2| ATP synthase beta chain, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|114555|sp|P23704|ATPB_NEUCR RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|14126|emb|CAA37756.1| unnamed protein product [Neurospora crassa]
 gi|168763|gb|AAA33562.1| mitochondrial ATPase beta-subunit [Neurospora crassa]
 gi|7801084|emb|CAB91479.1| H+-transporting ATP synthase (EC 3.6.1.34) beta chain [Neurospora
           crassa]
 gi|157070684|gb|EAA34017.2| ATP synthase beta chain, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 519

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN  G PID    + K D    I ++ P  + +    +   TGI+V+D+  P  
Sbjct: 128 ATLGRIINVTGDPIDERGPI-KTDKFRPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYA 186

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 187 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 245

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 246 QLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 305

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++ ++ ERI  +   KG+IT+V +V V  D+  DP   + 
Sbjct: 306 VSALLGRIPSAVGYQPTLAVDMGQMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 363

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D      E  +  + +  ++  ++  +
Sbjct: 364 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYETATRVQQILQEYKSLQ 423

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 424 DIIAILG 430


>gi|302670524|ref|YP_003830484.1| ATP synthase F1 beta subunit AtpD2 [Butyrivibrio proteoclasticus
           B316]
 gi|302394997|gb|ADL33902.1| ATP synthase F1 beta subunit AtpD2 [Butyrivibrio proteoclasticus
           B316]
          Length = 463

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 156/298 (52%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  ID    + K +   +I  + P  +++  V +  +TGI+VID+  P   G 
Sbjct: 86  GRLFNVLGDAIDNKGEV-KCEEKWQIHREPPKLVDQSPVVEVLETGIKVIDLLAPYAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+    ++   +     I + VGER RE  +   +      + K+ 
Sbjct: 145 KIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMTESGVINKTA 204

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R     T +T+AEYF   K  +VLL +D+I RF  +  E+++  G +P
Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDVKHQDVLLFIDNIFRFVQAGSEVSSLLGRMP 264

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ ++L  L ERI  +    G++T+V +V V  D+  DP   +  + LD   V
Sbjct: 265 SAVGYQPTLSTDLGALQERIASTRL--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322

Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R + E+G YP VDPL S SR L +        +    +  ++ +++E +DI  I G
Sbjct: 323 LSRKIVEQGIYPAVDPLESSSRILEEDVVGKVHYETAMKVQEILQKYKELQDIIAILG 380


>gi|295111324|emb|CBL28074.1| Archaeal/vacuolar-type H+-ATPase subunit B [Synergistetes bacterium
           SGP1]
          Length = 469

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 167/323 (51%), Gaps = 17/323 (5%)

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKG 144
           V   G+ +  P S    GRV N  G+PIDG   L  +  L +  M   P   +R    + 
Sbjct: 71  VRFLGKVQTLPVSRDMLGRVFNGRGEPIDGGAPLIAEQTLDINGMPMNP--YSRDFPSEF 128

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGER 198
            +TGI  ID   P+  GQ++ +F+ SG+  + + +  AR            V+ + +G  
Sbjct: 129 IQTGISTIDGLNPMVRGQKLPIFSASGLPHNRMAAQIARQATVISGHEDFAVVFAAMGIT 188

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
             E   F+ED+     L+++V+ +  +D+  I R   P  A+T AEY + + G +V++IL
Sbjct: 189 FEEASFFMEDFRKTGALERTVLYINLADDPAIERISTPRIALTAAEYLAFECGMHVVVIL 248

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
             +T +  ++REI+    E+P  RGYP  ++++L  + ER G  + + G+IT +  + + 
Sbjct: 249 TDLTNYCEALREISAARKEVPGRRGYPGYLYTDLATMYERAGRLKGKVGSITQIPILTMP 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK----- 371
            D+   PI D    I +G I+L+RSL  +G YPPVD + S+SRL DK    D+ +     
Sbjct: 309 EDDKTHPIPDLTGYITEGQIILSRSLHRQGIYPPVDVMPSLSRLKDKGIGKDKTREDHAD 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
           L++ L     R ++ +++ +I G
Sbjct: 369 LMNQLFAAYSRGKDAKELAVILG 391


>gi|227497331|ref|ZP_03927563.1| F0F1 ATP synthase subunit beta [Actinomyces urogenitalis DSM 15434]
 gi|226833202|gb|EEH65585.1| F0F1 ATP synthase subunit beta [Actinomyces urogenitalis DSM 15434]
          Length = 485

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 9/273 (3%)

Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + + PPA ++ +  E+ F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 131 IHRQPPAFDQLEAKEQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 190

Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +   +S+   VGER RE  + I E        K+ +V    DE P  R    L+A+T+AE
Sbjct: 191 NHGGVSVFAGVGERTREGNDLIVEMDEAGVFDKTALVFGQMDEPPGTRLRVALSALTMAE 250

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+ +L ERI  +  
Sbjct: 251 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSA 308

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPLAS SRL  
Sbjct: 309 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGIYPAVDPLASSSRLLA 368

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +  +E  ++ + +  ++ + +E +DI  I G
Sbjct: 369 PQFVGEEHYEVATRVKSILQKNKELQDIIAILG 401


>gi|4995844|emb|CAB44277.1| H(+)-transporting ATP synthase [Sarcolaena sp. Chase 903]
          Length = 479

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 173/360 (48%), Gaps = 29/360 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V + G    +       GR
Sbjct: 39  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVINTGTPLSVPVGGVTLGR 98

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID    LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 99  IFNVLGEPID---ELGPVDTXTTSPIHKPAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +          N
Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVINEQN 215

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 216 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 275

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 276 ALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 333

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +   A+  +    +   + R++E +DI
Sbjct: 334 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQXRIVGAEHYETAQRVKQTLQRYKELQDI 393


>gi|142564|gb|AAA22253.1| ATP synthase beta subunit (atpD) (EC 3.6.1.3) [Bacillus firmus]
          Length = 467

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 16/330 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV N LG+ ID  + +   D    I  + P         +  +TGI+V+D+  P  
Sbjct: 88  ATLGRVFNVLGEAIDLGEPVAADDKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G +IG+F G+G+GK+ L+     +   +  +IS+   VGER RE  +   +      +K
Sbjct: 148 IGGKIGLFGGAGVGKTVLIQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIK 207

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
           KS +V    +E P  R    L+ +T+AE+F  + G +VLL + +I+ F  +  E++   G
Sbjct: 208 KSAMVFGQMNEPPGARMAVALSGLTMAEHFRDRDGQDVLLFVVNIS-FTQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ +L ERI  +  + G++T++ ++ V  D++ DP   +  + LD 
Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L R L+E G YP VDPLAS SR L+ +    +   +   +   + +++E +DI  I 
Sbjct: 325 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 383

Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420
               G+D + ++    VH+   I  FL Q+
Sbjct: 384 ---LGMDELSEEDKLVVHRARRIQFFLSQN 410


>gi|256387195|gb|ACU80598.1| ATP synthase beta subunit [Crinoidea sp. MR-2009]
          Length = 334

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 151/285 (52%), Gaps = 26/285 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  E    I ++ P  +     ++  +TGI+V+D+  P
Sbjct: 20  LGRIINVIGEPIDE-----RGPIPTERRAAIHAEAPEFVEMSVRQEILETGIKVVDLLAP 74

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE-- 207
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  
Sbjct: 75  YAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIEGG 133

Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
             D  GD   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  
Sbjct: 134 VIDLKGDK-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQ 192

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 193 AGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPA 250

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +  + LD   VL+R +AE G YP VDPL S SR+ D     +E
Sbjct: 251 PATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRIMDPFIVGEE 295


>gi|255720819|ref|XP_002545344.1| ATP synthase beta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240135833|gb|EER35386.1| ATP synthase beta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 415

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G
Sbjct: 29  LGRIINVVGEPID-DRGPIECKERKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 87

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    + 
Sbjct: 88  GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 146

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 204

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   + 
Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SRL D      E   + + +   +  ++  +
Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDATVVGQEHYDVATGVQQTLQAYKSLQ 322

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 323 DIIAILG 329


>gi|91226238|ref|ZP_01261078.1| F0F1 ATP synthase subunit beta [Vibrio alginolyticus 12G01]
 gi|91189249|gb|EAS75528.1| F0F1 ATP synthase subunit beta [Vibrio alginolyticus 12G01]
          Length = 467

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  ++    + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDERGEVGAEEVYS--IHRSAPSYEEQSNEIALLETGVKVIDLICPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +    
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR+ D      D  ++   +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQDHYEVARGVQQTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|23503607|dbj|BAC20400.1| ATP synthase beta-subunit [Chloromonas palmelloides]
 gi|23503611|dbj|BAC20402.1| ATP synthase beta-subunit [Chloromonas rosae]
          Length = 376

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAETALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|159904098|ref|YP_001551442.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9211]
 gi|226740660|sp|A9BCC6|ATPB_PROM4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|159889274|gb|ABX09488.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9211]
          Length = 488

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + K   +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPI-KSSTTSPIHRSAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADNLTESKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|170294001|gb|ACB13094.1| ATP synthase beta subunit [Caulerpa brownii]
          Length = 367

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 158/306 (51%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +        I  + P  ++ +     F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVLGEPVDNLGDVASESPRSSIHREAPAFVDLETTLSIFETGIKVVDLLAPYRRG 80

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK 215
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +F   +++    N++
Sbjct: 81  GKIGLFGGAGVGKTVLIVELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIE 140

Query: 216 KS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           K       +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 141 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 200

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ SE+  L ERI  +  + G+IT++ ++ V  D+  DP      +
Sbjct: 201 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPAPAITFA 258

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E +D
Sbjct: 259 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEQHYNCAQNVQQTLQRYKELQD 317

Query: 389 IRLIGG 394
           I  I G
Sbjct: 318 IIAILG 323


>gi|159039540|ref|YP_001538793.1| F0F1 ATP synthase subunit beta [Salinispora arenicola CNS-205]
 gi|190358703|sp|A8M2J3|ATPB_SALAI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157918375|gb|ABV99802.1| ATP synthase F1, beta subunit [Salinispora arenicola CNS-205]
          Length = 485

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 103 GRVINALGK--PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           G V NA+G+   ++  ++L   D   +I  K P   + +   +  +TGI+VID+  P   
Sbjct: 104 GHVFNAIGECLNLEPGETLSPDD-HWQIHRKAPAFADLEPKTEMLETGIKVIDLLAPYVK 162

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +      + K
Sbjct: 163 GGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTESGVIDK 222

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +   VLL +D+I RF  +  E++T  G 
Sbjct: 223 TALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNIFRFTQAGSEVSTLLGR 282

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI     +   IT++ ++ V  D++ DP   +  + LD  
Sbjct: 283 MPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADDYTDPAPATTFAHLDAT 340

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
             L RS++++G YP VDPLAS SR+    +   E  +V+S +  ++ R+++ +DI  I G
Sbjct: 341 TNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFVVASEVKRILQRYKDLQDIIAILG 400


>gi|91178120|gb|ABE27295.1| mitochondrial F-ATPase beta subunit [Pichia kudriavzevii]
          Length = 337

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 164/310 (52%), Gaps = 26/310 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR++N +G P+D      +G +  +    +   PPA   Q  E +  +TGI+V+D+  P
Sbjct: 19  LGRILNVIGDPVDE-----RGPVDCKERKPIHADPPAFVEQSTEAEVLETGIKVVDLLAP 73

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  
Sbjct: 74  YARGGKIGLFGGAGVGKTVFIQELINNVAKAHGGFSVFTG-VGERTREGNDLYREMKETG 132

Query: 210 LGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +  NL+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +
Sbjct: 133 V-INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQA 191

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP  
Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SRL D A    E  ++ + +   +  ++
Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYEVATQVQETLQAYK 309

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 310 SLQDIIAILG 319


>gi|73543028|ref|YP_297548.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha JMP134]
 gi|118573728|sp|Q46VY0|ATPB_RALEJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|72120441|gb|AAZ62704.1| ATP synthase F1, beta subunit [Ralstonia eutropha JMP134]
          Length = 467

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPIAS-DERRAIHQKAPKFDELSPSTDLLETGIKVIDLICPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    L+ +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTLV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E   V+ ++   + R++E RDI  I G
Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQMDPQVVGQEHYNVARAVQQTLQRYKELRDIIAILG 385


>gi|23503627|dbj|BAC20410.1| ATP synthase beta-subunit [Pseudocarteria mucosa]
          Length = 376

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + ++ I  + P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVETEETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLSDS--KVSLVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
               S LD   VL+R+LA +G YP VDPL S S +  + W   EK  +   S+   + R+
Sbjct: 264 AVTFSHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYECAQSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|254229975|ref|ZP_04923376.1| ATP synthase F1, beta subunit [Vibrio sp. Ex25]
 gi|262392804|ref|YP_003284658.1| ATP synthase subunit beta [Vibrio sp. Ex25]
 gi|269965297|ref|ZP_06179418.1| ATP synthase subunit B [Vibrio alginolyticus 40B]
 gi|114573|sp|P12986|ATPB_VIBAL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|48339|emb|CAA34181.1| unnamed protein product [Vibrio alginolyticus]
 gi|151937477|gb|EDN56334.1| ATP synthase F1, beta subunit [Vibrio sp. Ex25]
 gi|262336398|gb|ACY50193.1| ATP synthase beta chain [Vibrio sp. Ex25]
 gi|269830098|gb|EEZ84326.1| ATP synthase subunit B [Vibrio alginolyticus 40B]
          Length = 467

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  ++    + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDERGEVGAEEVYS--IHRSAPSYEEQSNEIALLETGVKVIDLICPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +    
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR+ D      D  ++   +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQDHYEVARGVQQTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|118464478|ref|YP_880766.1| F0F1 ATP synthase subunit beta [Mycobacterium avium 104]
 gi|166201717|sp|A0QCX8|ATPB_MYCA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118165765|gb|ABK66662.1| ATP synthase F1, beta subunit [Mycobacterium avium 104]
          Length = 485

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D     G+      I  K PP    +   +  +TG++V+D+ TP   G 
Sbjct: 106 GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 164

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 165 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G +P
Sbjct: 225 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD    
Sbjct: 285 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+  +G +P VDPLAS S + D     +E  ++   +  ++ R+++ +DI  I G
Sbjct: 343 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 400


>gi|152965238|ref|YP_001361022.1| F0F1 ATP synthase subunit beta [Kineococcus radiotolerans SRS30216]
 gi|190358673|sp|A6W7G9|ATPB_KINRD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151359755|gb|ABS02758.1| ATP synthase F1, beta subunit [Kineococcus radiotolerans SRS30216]
          Length = 486

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 19/307 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMNRQRVEKG---FKTGIRVID 153
              G V NA+G+ ++    L +G+  +E+  + P    A N  ++E     F+TGI+VID
Sbjct: 101 ATLGHVFNAIGECLN----LEEGE-QLEVHERWPIHRKAPNFDQLESRTTMFETGIKVID 155

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDY 209
           + TP   G +IG+F G+G+GK+ L+    +    +   +S+   VGER RE  + I E  
Sbjct: 156 LLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMA 215

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K+ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E
Sbjct: 216 EAGVFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSE 275

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++T  G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   + 
Sbjct: 276 VSTLLGRMPSAVGYQPTLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATT 333

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETR 387
            + LD    L+R +A  G YP VDPL S SR+ D  + A D       +  ++ R +E +
Sbjct: 334 FAHLDATTELSREIASRGLYPAVDPLTSTSRILDPLYIAQDHYDTAVRVKQILQRNKELQ 393

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 394 DIIAILG 400


>gi|288959333|ref|YP_003449674.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510]
 gi|288911641|dbj|BAI73130.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510]
          Length = 473

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID   ++     S+ I  + P  +++    +   TGI+VID+  P   G
Sbjct: 88  LGRIINVIGEPIDERGAVNAAR-SLPIHRQAPDFVDQSTDAEVLITGIKVIDLLAPYAKG 146

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   + +   +   
Sbjct: 147 GKIGLFGGAGVGKTVTIMELINNVAKAHGGVSVFAG-VGERTREGNDLYHEMIESGVIKL 205

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  +  E+
Sbjct: 206 DGPGSKVALVYGQMNEPPGARARVALSGLTLAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 265

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 266 SALLGRIPSAVGYQPTLGTDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAASF 323

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE   +P VDPL S SR+ D     DE   V+ S+  ++  ++  +D
Sbjct: 324 AHLDATTVLSRSIAEMAIFPAVDPLDSTSRILDPRVVGDEHYSVARSVQKVLQTYKSLQD 383

Query: 389 IRLIGG 394
           I  I G
Sbjct: 384 IIAILG 389


>gi|170293969|gb|ACB13078.1| ATP synthase beta subunit [Oedogonium cardiacum]
          Length = 366

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    + + +  + I    P   +       F++GI+V+D+  P   G 
Sbjct: 22  GRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAFTDLDTRLSIFESGIKVVDLLAPYRRGG 80

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +ED 
Sbjct: 81  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 140

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 141 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 198

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 256

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            S LD   VL+R LA +G YP VDPLAS S +       D        +   + R++E +
Sbjct: 257 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDAHYNCAQKVKETLQRYKELQ 316

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 317 DIIAILG 323


>gi|319785938|ref|YP_004145413.1| ATP synthase F1 subunit beta [Pseudoxanthomonas suwonensis 11-1]
 gi|317464450|gb|ADV26182.1| ATP synthase F1, beta subunit [Pseudoxanthomonas suwonensis 11-1]
          Length = 465

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 16/308 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+++ LG  ID    +   D   EI    P   ++    +  +TGI+VID+  P 
Sbjct: 80  AGTLGRIMDVLGNAIDEAGPVQASD-HWEIHRAAPSYEDQSSATELLETGIKVIDLMCPF 138

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N 
Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267
           L K  +V    +E P  R    LT +T+AEYF      S KG +VLL +D+I R+  +  
Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGKDVLLFVDNIYRYTLAGT 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VL+R++A  G YP VDPL S SR  D      E       +   + +++E 
Sbjct: 316 TFAHLDATVVLSRNIAALGIYPAVDPLDSTSRQLDPNVIGHEHYDTARRVQATLQKYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 KDIIAILG 383


>gi|88802039|ref|ZP_01117567.1| ATP synthase subunit B [Polaribacter irgensii 23-P]
 gi|88782697|gb|EAR13874.1| ATP synthase subunit B [Polaribacter irgensii 23-P]
          Length = 503

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 162/330 (49%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  G  IDG  +L K G   + I    P   +     +   TGI+VID+  P   G
Sbjct: 91  GRLFNVTGDAIDGLGNLKKEGKDGVSIHRSAPKFEDLSVSTEVLFTGIKVIDLIEPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 211 DDFMHSMEEGGWDLSKVDKPGMRESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 270

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            S+G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 271 ESQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 328

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+   A 
Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSAAI 388

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +E     +++  ++ R++E +DI  I G
Sbjct: 389 LGEEHYNTATAVKEILQRYKELQDIIAILG 418


>gi|254774349|ref|ZP_05215865.1| F0F1 ATP synthase subunit beta [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 485

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D     G+      I  K PP    +   +  +TG++V+D+ TP   G 
Sbjct: 106 GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 164

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 165 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G +P
Sbjct: 225 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD    
Sbjct: 285 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+  +G +P VDPLAS S + D     +E  ++   +  ++ R+++ +DI  I G
Sbjct: 343 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 400


>gi|171690264|ref|XP_001910057.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945080|emb|CAP71191.1| unnamed protein product [Podospora anserina S mat+]
          Length = 565

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G PID    + K D  + I ++ P  + +    +   TGI+V+D+  P  
Sbjct: 174 ATLGRIMNVTGDPIDERGPI-KTDKRLPIHAEAPEFIEQSTTAEILVTGIKVVDLLAPYA 232

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 233 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 291

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 292 QLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 351

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   + 
Sbjct: 352 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 409

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D     +E  +  + +  ++  ++  +
Sbjct: 410 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYQTATRVQQILQEYKSLQ 469

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 470 DIIAILG 476


>gi|168180954|ref|ZP_02615618.1| V-type ATPase, B subunit [Clostridium botulinum NCTC 2916]
 gi|182668348|gb|EDT80327.1| V-type ATPase, B subunit [Clostridium botulinum NCTC 2916]
          Length = 461

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 13/332 (3%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G+     G+V+ IN D  +V +     G  I    + F      +  S    GRV +
Sbjct: 34  LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P DG   +   D   +I       + R   ++  +TG+  ID    L  GQ++ VF
Sbjct: 92  GLGNPKDGGPKI-IADEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+  + L +  AR      SD    V+ + +G    E + FI+D+     + ++V+ 
Sbjct: 151 SGSGLPHAELAAQIARQAKVLKSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210

Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+P  
Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  ++++L  + ER G    ++G+IT +  + +  D+   PI D    I +G I+L+
Sbjct: 271 RGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           R L ++G  PP+D L S+SRL DK    ++ +
Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKGIGKEKTR 362


>gi|332992898|gb|AEF02953.1| F0F1 ATP synthase subunit beta [Alteromonas sp. SN2]
          Length = 480

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 160/309 (51%), Gaps = 15/309 (4%)

Query: 90  WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            G  ++        R+ N  G+ IDG   +   +    +    PP ++     + F+TGI
Sbjct: 81  QGPLKVPVGPSILTRMFNVFGEAIDGKPFINNTE-RRSVHQSPPPLVSISSQLQIFETGI 139

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----V 202
           +++D+  PL  G + G+F G+G+GK+ LL+    +    +  +S+   +GER RE     
Sbjct: 140 KIVDVLCPLERGGKAGLFGGAGVGKTVLLTEMIHNMVSHQQGVSIFCGIGERCREGEELY 199

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           RE  +  + DN+   V++    +E P  R     +A+T+AEYF   +  +VLL++D+I R
Sbjct: 200 REMKQAGVLDNM---VMLFGQMNEPPGSRFRIGHSALTMAEYFRDDEKKDVLLLIDNIFR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G++P   GY  ++ +EL  L ERI  +  + G IT++ +V V  D+  
Sbjct: 257 FIQAGSEVSGLMGQMPSRMGYQPTLGTELSSLEERI--ANTQNGAITSIQAVYVPADDFT 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP A    S L   +VL+R  A EG YP VDPL S S+LA      D   ++   + H++
Sbjct: 315 DPAAVHTFSHLSATLVLSRKRASEGFYPAVDPLQSSSKLATPNVVGDRHYQVAQQVRHIL 374

Query: 381 HRFEETRDI 389
            ++ E +DI
Sbjct: 375 AQYNELKDI 383


>gi|325282482|ref|YP_004255023.1| V-type ATP synthase beta chain [Deinococcus proteolyticus MRP]
 gi|324314291|gb|ADY25406.1| V-type ATP synthase beta chain [Deinococcus proteolyticus MRP]
          Length = 467

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 151/276 (54%), Gaps = 11/276 (3%)

Query: 94  RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           R+  S    GR  + LG+PIDG  + + +  +S+   +  P +  R + E+  +TGI  I
Sbjct: 81  RLGVSKEMIGRRFDGLGRPIDGLPEVVAEQRVSINGQAMNPAS--RAKPEEFIQTGISTI 138

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206
           D+ T L  GQ++ +F+GSG+  + L +  AR            V+ + +G   REV  F 
Sbjct: 139 DVNTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L +SV+ +  +D+  + R + P  A+T AEY +   G +VL+IL  IT +  
Sbjct: 199 QEFERTGALARSVLFLNRADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDITNYCE 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI     E+P  RG+P  ++++L  L ER G  + + G++T +  + +  D+   PI
Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVDGKPGSVTQIPILSMPDDDITHPI 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G IV++R L  +G YPP++PL S+SRL
Sbjct: 319 PDLTGYITEGQIVVDRGLNSKGVYPPINPLPSLSRL 354


>gi|302869578|ref|YP_003838215.1| ATP synthase F1 subunit beta [Micromonospora aurantiaca ATCC 27029]
 gi|315503960|ref|YP_004082847.1| ATP synthase f1, beta subunit [Micromonospora sp. L5]
 gi|302572437|gb|ADL48639.1| ATP synthase F1, beta subunit [Micromonospora aurantiaca ATCC
           27029]
 gi|315410579|gb|ADU08696.1| ATP synthase F1, beta subunit [Micromonospora sp. L5]
          Length = 481

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 23/306 (7%)

Query: 103 GRVINALGK--------PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           G V NA+G+         I  DD  G       I  K P   + +   +  +TGI+VID+
Sbjct: 99  GHVFNAIGECLNLTEGETIQADDRWG-------IHRKAPAFADLEPKTEMLETGIKVIDL 151

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLG 211
             P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +   
Sbjct: 152 LAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTE 211

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
              + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I RF  +  E+
Sbjct: 212 SGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNIFRFTQAGSEV 271

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D++ DP   +  
Sbjct: 272 STLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADDYTDPAPATTF 329

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRD 388
           + LD    L RS++++G YP VDPLAS SR+    +  +E   V++ +  ++ R+++ +D
Sbjct: 330 AHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKRILQRYKDLQD 389

Query: 389 IRLIGG 394
           I  I G
Sbjct: 390 IIAILG 395


>gi|227498891|ref|ZP_03929031.1| sodium-transporting two-sector ATPase [Acidaminococcus sp. D21]
 gi|226904343|gb|EEH90261.1| sodium-transporting two-sector ATPase [Acidaminococcus sp. D21]
          Length = 463

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 21/330 (6%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRV 105
           +HQ       G+V+ I+ D   +       G+    +    V H  +  +SP     GRV
Sbjct: 32  IHQANGEVRSGRVLVIDGDRALVQLFESSQGLQASTAKARFVGHGIQLGVSPD--MLGRV 89

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQ 162
            + +G PIDG    G   +  E +      MN   R    +  +TG+  ID    L  GQ
Sbjct: 90  FDGMGNPIDG----GPKIIPQEYLDINGAPMNPAARDYPAEFIQTGVSAIDGLNTLVRGQ 145

Query: 163 RIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDY-LGDNLK 215
           ++ VF+GSG+  + L +  AR       D    V+ + VG    E   F+ED+     L 
Sbjct: 146 KLPVFSGSGLPHAQLAAQIARQAKVLGKDEKFAVVFAAVGITFEEANFFMEDFNRTGALS 205

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
           ++V+ +  +++  + R   P  A+T AEY + + D +VL+I+  IT +A ++RE++    
Sbjct: 206 RAVMFINLANDPAVERISTPRMAITAAEYLAFEMDMHVLVIITDITNYADALREVSAARK 265

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  RGYP  ++++L  + ER G    +KG+IT +  + +  D+   PI D    I +G
Sbjct: 266 EVPGRRGYPGYLYTDLATMYERAGKIRGKKGSITMIPILSMPEDDKTHPIPDLTGYITEG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            I+L+R L  +G  PP+D L S+SRL DK 
Sbjct: 326 QIILSRELYRKGLKPPIDVLPSLSRLKDKG 355


>gi|145503262|ref|XP_001437608.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404759|emb|CAK70211.1| unnamed protein product [Paramecium tetraurelia]
          Length = 499

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 14/303 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G PID    + +  +   I  + P  +++    +   TGI+V+D+  P   G 
Sbjct: 113 GRIMNVIGDPIDERGPI-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGG 171

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +   +     
Sbjct: 172 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMVASGVINLSG 231

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
             +  ++    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++  
Sbjct: 232 GSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSAL 291

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ ++L +L ERI  +  +KG+IT+V ++ V  D+  DP   +  + L
Sbjct: 292 LGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 349

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D   VL+R+L E G YP VDPL S SR+ D     ++   V+  +  L+  ++  +DI  
Sbjct: 350 DATTVLSRALTELGIYPAVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQDYKSLQDIIA 409

Query: 392 IGG 394
           I G
Sbjct: 410 ILG 412


>gi|119350461|gb|ABL63181.1| AtpB [Carteria crucifera]
          Length = 392

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 38  LGRIFNVLGEPVDNMGPVETQE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 96

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 97  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 157 NLSDS--KVALVYGQMNEPPXARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 214

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 273 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 331

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 332 LQDIIAILG 340


>gi|91178136|gb|ABE27303.1| mitochondrial F-ATPase beta subunit [Candida tropicalis]
          Length = 337

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 161/306 (52%), Gaps = 20/306 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID D    +      I ++ P  + +    +  +TGI+V+D+  P   G 
Sbjct: 20  GRIINVVGEPID-DRGPIECKERKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    +  
Sbjct: 79  KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E+
Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  
Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VDPL S SRL D      E   + + +   +  ++  +D
Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDATVVGQEHYDVATGVQQTLQAYKSLQD 313

Query: 389 IRLIGG 394
           I  I G
Sbjct: 314 IIAILG 319


>gi|4519332|dbj|BAA75581.1| ATP synthase beta-subunit [Volvulina pringsheimii]
          Length = 376

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   D ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVLIED-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|119350523|gb|ABL63212.1| AtpB [Oedogonium cardiacum]
          Length = 392

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    + + +  + I    P   +       F++GI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAFTDLDTRLSIFESGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +ED 
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 158 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            S LD   VL+R LA +G YP VDPLAS S +       D        +   + R++E +
Sbjct: 274 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDAHYNCAQKVKETLQRYKELQ 333

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 334 DIIAILG 340


>gi|416680|sp|Q03235|ATPB_PECFR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|581446|emb|CAA45841.1| ATPase (beta-subunit) [Pectinatus frisingensis]
          Length = 470

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 154/299 (51%), Gaps = 8/299 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N LG+ +D + +         I    P    ++   +  +TGI+V+D+  P   G
Sbjct: 89  LGRVFNVLGQTVDHNPAPVGNKEFWPIHRPAPKFDEQETSTQILETGIKVVDLIAPYSRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            +IG+F G+G+GK+ L+     +         + S VGER RE  +   +      + K+
Sbjct: 149 GKIGLFGGAGVGKTVLIMELIHNIATQHGGYSVFSGVGERTREGNDLWSEMTESGVINKT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +
Sbjct: 209 ALVYGQMNEPPGARMRVALTGLTMAEYFRDVQHQDVLLFIDNIFRFIQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 269 PSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPGPAATFTHLDATT 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R +AE G YP VDPL S SR+ D      D  ++   +  ++ +++E +DI  I G
Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPHVIGEDHYEVARGVQAVLQKYKELQDIIAILG 385


>gi|333024392|ref|ZP_08452456.1| putative ATP synthase F1, beta subunit [Streptomyces sp. Tu6071]
 gi|332744244|gb|EGJ74685.1| putative ATP synthase F1, beta subunit [Streptomyces sp. Tu6071]
          Length = 476

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 160/299 (53%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  +          I    P     +   + F+TGI+VID+ TP   G 
Sbjct: 97  GKVFNTLGEVLNKPEENANIGERWAIHRTAPRFDELESKTEMFETGIKVIDLLTPYVKGG 156

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + I D + D+  + K+
Sbjct: 157 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLI-DEMSDSGVIDKT 215

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +
Sbjct: 216 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 275

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   
Sbjct: 276 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 333

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R ++E+G YP VDPL S SR+ D  + A D       + +++ ++++ +DI  I G
Sbjct: 334 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAKDHYDTAMRVKNILQKYKDLQDIIAILG 392


>gi|226950035|ref|YP_002805126.1| V-type ATPase, B subunit [Clostridium botulinum A2 str. Kyoto]
 gi|254764986|sp|C1FTN6|VATB_CLOBJ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|226843907|gb|ACO86573.1| V-type ATPase, B subunit [Clostridium botulinum A2 str. Kyoto]
 gi|322806952|emb|CBZ04522.1| V-type ATP synthase subunit B [Clostridium botulinum H04402 065]
          Length = 461

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 13/332 (3%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G+     G+V+ IN D  +V +     G  I    + F      +  S    GRV +
Sbjct: 34  LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG P DG   +   D   +I       + R   ++  +TG+  ID    L  GQ++ VF
Sbjct: 92  GLGNPKDGGPKI-IADEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+  + L +  AR      SD    V+ + +G    E + FI+D+     + ++V+ 
Sbjct: 151 SGSGLPHAELAAQIARQAKVLKSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210

Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+P  
Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  ++++L  + ER G    ++G+IT +  + +  D+   PI D    I +G I+L+
Sbjct: 271 RGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           R L ++G  PP+D L S+SRL DK    ++ +
Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKGIGKEKTR 362


>gi|17548034|ref|NP_521436.1| F0F1 ATP synthase subunit beta [Ralstonia solanacearum GMI1000]
 gi|81592095|sp|Q8XU76|ATPB_RALSO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|17430340|emb|CAD17105.1| probable atp synthase beta chain protein [Ralstonia solanacearum
           GMI1000]
          Length = 467

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPIA-ADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E  ++   +   + R++E RDI  I G
Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQIVGTEHYEVARRVQQTLQRYKELRDIIAILG 385


>gi|318135996|gb|ADV41650.1| ATP synthase beta subunit [Cinachyrella alloclada]
          Length = 427

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 146/279 (52%), Gaps = 14/279 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+ +D    + + D    I  + P  +     ++   TGI+V+
Sbjct: 55  IRIPVGPSTLGRIMNVIGESVDERGPI-ESDTYASIHQEAPEFVEMSVEQEILVTGIKVV 113

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREF 205
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      E 
Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEM 173

Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
           IE     L D+  K  +V    +E P  R    LT +T+AEYF  K G +VLL +D+I R
Sbjct: 174 IETGVISLKDDKSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGKDVLLFIDNIFR 233

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  
Sbjct: 234 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVFVPADDLT 291

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           DP   +  + LD   VL+R+++E G YP VDPL S SR+
Sbjct: 292 DPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRI 330


>gi|46909245|gb|AAT06140.1| ATP synthase beta subunit [Eucidaris tribuloides]
          Length = 427

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 146/273 (53%), Gaps = 16/273 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +     S  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 64  LGRIINVIGEPIDERGPVPTKKRSA-IHAEAPEFVEMSVTQEILVTGIKVVDLLAPYAKG 122

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210
            +IG+F G+G+GK+     L++  A+      V+   VGER RE  +   +        L
Sbjct: 123 GKIGLFGGAGVGKTVVIMELINNVAKGHGGFSVLAG-VGERTREGNDLYHEMMEGGLISL 181

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 182 TDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEM 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332


>gi|262038591|ref|ZP_06011960.1| ATP synthase F1, beta subunit [Leptotrichia goodfellowii F0264]
 gi|261747460|gb|EEY34930.1| ATP synthase F1, beta subunit [Leptotrichia goodfellowii F0264]
          Length = 465

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+ +D  + L     +++ + K  P+   Q  +    +TGI+V+D+  P   
Sbjct: 86  LGRIFNVLGETVDAGEELIPD--AVDSIHKEAPSFESQGTDSEILETGIKVVDLLAPYLK 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE R+   +      L K
Sbjct: 144 GGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMKESGVLNK 203

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LTA+T+AEYF  K G NVLL +D+I RF  +  E++   G 
Sbjct: 204 TALVYGQMNEPPGARLRVALTALTMAEYFRDKEGQNVLLFIDNIFRFTQAGAEVSALLGR 263

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 264 MPSAVGYQPNLATEMGTLQERI--TSTSSGSITSVQAVYVPADDLTDPAPATTFAHLDAT 321

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394
            VL+RS+A  G YP VDPL S SR+ +     +E   V+  T  ++ R++E +DI  I G
Sbjct: 322 TVLSRSIASLGIYPAVDPLDSTSRILEPEIVGNEHYKVARETQRVLQRYKELQDIIAILG 381


>gi|254000516|ref|YP_003052579.1| F0F1 ATP synthase subunit beta [Methylovorus sp. SIP3-4]
 gi|313202475|ref|YP_004041133.1| ATP synthase f1 subunit beta [Methylovorus sp. MP688]
 gi|253987195|gb|ACT52052.1| ATP synthase F1, beta subunit [Methylovorus sp. SIP3-4]
 gi|312441791|gb|ADQ85897.1| ATP synthase F1, beta subunit [Methylovorus sp. MP688]
          Length = 465

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + D    I  K P            +TGI+VID+  P   G 
Sbjct: 90  GRIMDVLGRPIDEAGPI-ECDERRSIHQKAPSFEELSPSVDLLETGIKVIDLVCPFAKGG 148

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 149 KVGLFGGAGVGKTVNMMELINNIAKQHAGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 208 GMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 267

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 268 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 325

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+ ++   + R++E RDI  I G
Sbjct: 326 LSRDIAALGIYPAVDPLDSTSRQLDPLIVGEEHYNVARAVQSTLQRYKELRDIIAILG 383


>gi|269957232|ref|YP_003327021.1| ATP synthase F1 subunit beta [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305913|gb|ACZ31463.1| ATP synthase F1, beta subunit [Xylanimonas cellulosilytica DSM
           15894]
          Length = 493

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 145/273 (53%), Gaps = 8/273 (2%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P   + +     F+TGI+VID+ TP   G +IG+F G+G+GK+ L+    +    
Sbjct: 136 IHRKAPAFKDLESKTSMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 195

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D   +S+   VGER RE  + I +        K+ +V    DE P  R    L+ +T+AE
Sbjct: 196 DHGGVSVFAGVGERTREGNDLIHEMEDAGVFDKTALVFGQMDEPPGTRLRIALSGLTMAE 255

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 256 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGILQERITSTRG 315

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A +G YP VDPL S SR+ D
Sbjct: 316 H--SITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASKGLYPAVDPLTSTSRILD 373

Query: 363 KAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             +  A+   + + +  ++ R +E +DI  I G
Sbjct: 374 PRYVGAEHYAVATEVKQILQRNKELQDIIAILG 406


>gi|295130799|ref|YP_003581462.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK137]
 gi|291377228|gb|ADE01083.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK137]
 gi|313772049|gb|EFS38015.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL074PA1]
 gi|313810249|gb|EFS47970.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL083PA1]
 gi|313830579|gb|EFS68293.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL007PA1]
 gi|314973580|gb|EFT17676.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL053PA1]
 gi|314975802|gb|EFT19897.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL045PA1]
 gi|315095854|gb|EFT67830.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL038PA1]
 gi|327326405|gb|EGE68195.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL096PA2]
 gi|327448317|gb|EGE94971.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL043PA1]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|28210706|ref|NP_781650.1| V-type ATP synthase subunit B [Clostridium tetani E88]
 gi|75542686|sp|Q896K3|VATB1_CLOTE RecName: Full=V-type ATP synthase beta chain 1; AltName:
           Full=V-ATPase subunit B 1
 gi|28203144|gb|AAO35587.1| V-type sodium ATP synthase subunit B [Clostridium tetani E88]
          Length = 461

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           G+V+ IN D  +V +     G  I      F      IS S    GRV + LG+P D G 
Sbjct: 42  GRVLEINEDKALVQLFEGSAGINIKGSKAKFLGKPLEISVSEDMLGRVFDGLGRPKDEGP 101

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + +  L +  +   P A N     +  +TGI  ID    L  GQ++ VF+GSG+  + 
Sbjct: 102 RIIPEKRLDINGIPINPVARNYP--SEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHAQ 159

Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR      SD    V+ + VG    E   F++D+     + +SV+ +  +++  I
Sbjct: 160 LAAQIARQAKVLNSDSKFAVVFAAVGITFEEAEFFVDDFTKTGAIDRSVLFMNLANDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+IL  +T +  ++RE++    E+P  RGYP  +++
Sbjct: 220 ERIATPRMALTTAEYLAFEKGMHVLVILTDLTNYCEALREVSAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G  + ++G+IT +  + +  D+   PI D    I +G I+L+R L  +G  
Sbjct: 280 DLATLYERAGRIKGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYRKGVM 339

Query: 349 PPVDPLASVSRLADKA 364
           PP+D L S+SRL DK 
Sbjct: 340 PPIDVLPSLSRLKDKG 355


>gi|314923494|gb|EFS87325.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL001PA1]
 gi|314966539|gb|EFT10638.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL082PA2]
 gi|314981464|gb|EFT25558.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA3]
 gi|315092128|gb|EFT64104.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA4]
 gi|315103538|gb|EFT75514.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL050PA2]
          Length = 489

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           G V N  G  ++ D S+ +      I  + PPA +    E +  +TGI+V+D+ TP   G
Sbjct: 109 GHVWNVTGDVLNADPSIIEVTERWPI-HRDPPAFDDLEPETEMLETGIKVLDLLTPYVKG 167

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +      LK +
Sbjct: 168 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDT 227

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T  G +
Sbjct: 228 ALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRM 287

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + LD   
Sbjct: 288 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATT 345

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI  I G
Sbjct: 346 ELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILG 404


>gi|307153843|ref|YP_003889227.1| ATP synthase F1 subunit beta [Cyanothece sp. PCC 7822]
 gi|306984071|gb|ADN15952.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7822]
          Length = 483

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 163/323 (50%), Gaps = 16/323 (4%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+V       +    C  GR+ N LG+P+D    +   + +  I    P   + +   K 
Sbjct: 79  DIVDTGAPISVPVGKCTLGRIFNVLGEPVDEKGPVNVTE-TFPIHRPAPKLTDLETKPKV 137

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE 201
           F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +         +   VGER RE
Sbjct: 138 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 197

Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
                 E IE  +   DN ++S   +V    +E P  R    L+A+T+AEYF      +V
Sbjct: 198 GNDLYNEMIESKVINSDNPEESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDV 257

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +
Sbjct: 258 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 315

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +        E   
Sbjct: 316 VYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGKEHYD 375

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
              ++   + R++E +DI  I G
Sbjct: 376 TARAVQSTLQRYKELQDIIAILG 398


>gi|84489926|ref|YP_448158.1| V-type ATP synthase subunit B [Methanosphaera stadtmanae DSM 3091]
 gi|121731842|sp|Q2NF88|VATB_METST RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|84373245|gb|ABC57515.1| AhaB [Methanosphaera stadtmanae DSM 3091]
          Length = 467

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 17/310 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           +I  S    GR+ N +GKPIDG  D +   +L +      P A  R+   +  +TGI  I
Sbjct: 84  KIGLSTDMLGRIFNGIGKPIDGGPDIIPDQELDVNGSPMNPSA--REFPAEFIQTGISTI 141

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFI 206
           D    L  GQ++ +F+GSG+  + L +  AR       D    VI   +G    E   F+
Sbjct: 142 DGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVIAEDSEFAVIFGAMGITHEEANFFM 201

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
            ++     L++  V +  +D+  I R M P  A+T AEY +  KG +VL+IL  IT +  
Sbjct: 202 NEFEQTGALERVTVFMNLADDPAIERIMTPKMALTTAEYLAFEKGMHVLVILTDITNYCE 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI++   E+P  RGYP  ++++L  + ER G    ++G+IT +  +++  D+   PI
Sbjct: 262 ALREISSARNEVPGRRGYPGYMYTDLAGMYERAGRINGKEGSITQMPILVMPQDDITHPI 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLI 380
            D    I +G +VL+R L   G YPPVD L S+SRL      +  + ++   VS    L 
Sbjct: 322 PDLTGYITEGQVVLSRELDRTGIYPPVDVLPSLSRLMSGGIGEGRTREDHSGVSD--QLY 379

Query: 381 HRFEETRDIR 390
             + E RD+R
Sbjct: 380 AAYAEGRDLR 389


>gi|314983719|gb|EFT27811.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA1]
 gi|327445699|gb|EGE92353.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL043PA2]
 gi|328760904|gb|EGF74469.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL099PA1]
          Length = 489

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400

Query: 391 LIGG 394
            I G
Sbjct: 401 AILG 404


>gi|313833615|gb|EFS71329.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL056PA1]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|90415394|ref|ZP_01223328.1| ATP synthase subunit B [marine gamma proteobacterium HTCC2207]
 gi|90332717|gb|EAS47887.1| ATP synthase subunit B [marine gamma proteobacterium HTCC2207]
          Length = 465

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160
            GR+++ LG PID    +G+ +  M I  K PPA +         +TGI+VID+  P   
Sbjct: 83  LGRIMDVLGNPIDEKGPIGEKE-RMAIHRK-PPAYDELAASDDLLETGIKVIDLVCPFAK 140

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL--- 214
           G ++G+F G+G+GK+  +     +   +   +S+   VGER RE  +F  +     +   
Sbjct: 141 GGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYYEMQESGVVNI 200

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                 K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E+
Sbjct: 201 ETPSESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEV 260

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  
Sbjct: 261 SALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTF 318

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD  +VL+R +A +G YP VDPL S SR  D      E   V+  +  ++ R++E +D
Sbjct: 319 AHLDSTVVLSRDIASKGIYPAVDPLDSTSRQLDPLIIGTEHYAVARGVQSVLQRYKELKD 378

Query: 389 IRLIGG 394
           I  I G
Sbjct: 379 IIAILG 384


>gi|3893822|gb|AAD03393.1| ATPase beta subunit [Nicotiana sylvestris]
          Length = 555

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      +GD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 164 ATLGRIINVIGEPIDE-----RGDINTDHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 218

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++  F   +   VGE   E     RE IE
Sbjct: 219 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGFS--VFPGVGEPSAEGNDLYREMIE 276

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 277 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 336

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 337 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 394

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 395 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVL 454

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 455 QNYKNLQDIIAILG 468


>gi|332519270|ref|ZP_08395737.1| ATP synthase F1, beta subunit [Lacinutrix algicola 5H-3-7-4]
 gi|332045118|gb|EGI81311.1| ATP synthase F1, beta subunit [Lacinutrix algicola 5H-3-7-4]
          Length = 502

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG   L K G+  + I    P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGDLPKAGEAGLPIHRNAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEEGGWDLQKVDKSAMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  L+ R++E +DI  I G
Sbjct: 388 LGDEHYNCAQRVKELLQRYKELQDIIAILG 417


>gi|302381246|ref|YP_003817069.1| ATP synthase F1 subunit beta [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191874|gb|ADK99445.1| ATP synthase F1, beta subunit [Brevundimonas subvibrioides ATCC
           15264]
          Length = 519

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 167/336 (49%), Gaps = 24/336 (7%)

Query: 79  EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G   ++P      GR++N +G PID    +    +   I  + P    
Sbjct: 102 EGLTRGQPVTDTGTSILAPVGPGTLGRIMNVVGAPIDEQGPIAT-TMYRPIHREAPTFEE 160

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIIS 193
           +    +   TGI+VID+  P   G +IG+F G+G+GK+     L++  A++     V+  
Sbjct: 161 QSTSSEILVTGIKVIDLICPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG 220

Query: 194 LVGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVT 240
            VGER RE  +   + +  N+              K  +V    +E P  R    LT + 
Sbjct: 221 -VGERTREGNDLYHEMIESNVNVDPSKNGGSTEGSKCALVYGQMNEPPGARARVALTGLA 279

Query: 241 IAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 280 QAEYFRDEEGKDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGNLQERI-- 337

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  +KG+IT+V ++ V  D+  DP   +  + LD   VLNR +A +  +P VDPL S SR
Sbjct: 338 TSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLNRDIAAQAIFPAVDPLDSTSR 397

Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           + D     +E  LV+ S+  ++ +++  +DI  I G
Sbjct: 398 IMDPLVIGEEHYLVARSVQEVLQQYKALKDIIAILG 433


>gi|149913696|ref|ZP_01902229.1| ATP synthase F1, beta subunit [Roseobacter sp. AzwK-3b]
 gi|149812816|gb|EDM72645.1| ATP synthase F1, beta subunit [Roseobacter sp. AzwK-3b]
          Length = 474

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   I       GR++N +G+P+D G   + K   S+    +  P  + Q  E     TG
Sbjct: 75  GPITIPVGDVTLGRILNVVGEPVDEGAPIVAKERRSIH---QPAPEFSEQSTESEVLVTG 131

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE-- 201
           I+VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE  
Sbjct: 132 IKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGN 189

Query: 202 --VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
               E IE  +   DNL  S V  V    +E P  R    LT +T+AE F  + G +VL 
Sbjct: 190 DLYHEMIESNVIKPDNLPDSQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLF 249

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT++ +V 
Sbjct: 250 FVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKAGSITSIQAVY 307

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373
           V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D +   +E  K+ 
Sbjct: 308 VPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPSIVGEEHYKVA 367

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +  ++ R++  +DI  I G
Sbjct: 368 RDVQGILQRYKSLQDIIAILG 388


>gi|23503601|dbj|BAC20397.1| ATP synthase beta-subunit [Chloromonas radiata]
          Length = 376

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAETTLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKDGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S   +  + W   EK   +   +   + 
Sbjct: 262 APSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTPTML-QPWIVGEKHYSVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 321 RYKELQDIIAILG 333


>gi|23503623|dbj|BAC20408.1| ATP synthase beta-subunit [Carteria radiosa]
          Length = 376

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 160/311 (51%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG PID   +LG    + ++ I    P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGDPID---NLGPVNAEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+ +DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLSDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   +K      S+   + R+
Sbjct: 264 STTFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGDKHYDCARSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|229825576|ref|ZP_04451645.1| hypothetical protein GCWU000182_00938 [Abiotrophia defectiva ATCC
           49176]
 gi|229790139|gb|EEP26253.1| hypothetical protein GCWU000182_00938 [Abiotrophia defectiva ATCC
           49176]
          Length = 468

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 175/357 (49%), Gaps = 21/357 (5%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCG 103
           CL +   HQG      G ++R    I+     G+  ++   ++       ++       G
Sbjct: 41  CLMEVSSHQG------GNIVRC---IMLTASEGLSRDM---EVTATGSGIKVPVGEATLG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N  G  IDG  SL + +    I  + P   ++    +  +TGI+VID+  P   G +
Sbjct: 89  RLFNVFGDTIDGGVSL-ENEEHWTIHREPPKFSDQSPAVEILETGIKVIDLLAPYAKGGK 147

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSVV 219
           IG+F G+G+GK+ L+    R+   +     I + VGER RE  + + E      + K+ +
Sbjct: 148 IGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVIAKTAL 207

Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     T +T+AEYF   K  +VLL +D+I R+  +  E++   G +P 
Sbjct: 208 VFGQMNEPPGARMRVAETGLTMAEYFRDEKNADVLLFIDNIFRYVQAGSEVSALLGRMPS 267

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +++  L ERI  ++   G++T+V +V V  D+  DP   +  + LD   VL
Sbjct: 268 AVGYQPTLATDVGELQERIASTKS--GSVTSVQAVYVPADDITDPAPATTFTHLDATTVL 325

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +R + E+G YP VDPL S SR+ +     +E       +  ++ ++ E +DI  I G
Sbjct: 326 SRKIVEQGIYPAVDPLESSSRVLEADVVGEEHYNTARKVQEMLQKYRELQDIIAILG 382


>gi|190358737|sp|Q73X59|ATPB_MYCPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 485

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D     G+      I  K PP    +   +  +TG++V+D+ TP   G 
Sbjct: 106 GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 164

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 165 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G +P
Sbjct: 225 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD    
Sbjct: 285 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+  +G +P VDPLAS S + D     +E  ++   +  ++ R+++ +DI  I G
Sbjct: 343 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 400


>gi|11559338|dbj|BAB18827.1| ATP synthase beta-subunit [Volvulina steinii]
          Length = 376

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D +  + K + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E +
Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKELQ 326

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 327 DIIAILG 333


>gi|119715998|ref|YP_922963.1| F0F1 ATP synthase subunit beta [Nocardioides sp. JS614]
 gi|190358688|sp|A1SHJ1|ATPB_NOCSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119536659|gb|ABL81276.1| ATP synthase F1 subcomplex beta subunit [Nocardioides sp. JS614]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 17/303 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           G+V N LG+ ++    L +G+         I  K P     +   + F+TGI+VID+ TP
Sbjct: 103 GKVFNTLGEVLN----LEEGETFEVKERWGIHRKAPAFDQLESKTQMFETGIKVIDLLTP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFI-EDYLGDN 213
              G +IG+F G+G+GK+ L+  M AR   D     + + VGER RE  + I E      
Sbjct: 159 YVQGGKIGLFGGAGVGKTVLIQEMIARVAKDHGGVSVFAGVGERTREGNDLIVEMEEAGV 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           + ++ +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T 
Sbjct: 219 IGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + L
Sbjct: 279 LGRMPSAVGYQPNLADEMGTLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D    L+R +A  G YP VDPL S SR+ D  +           +  ++ R +E +DI  
Sbjct: 337 DATTELSREIASLGIYPAVDPLTSTSRILDPQYIGQAHYDCAIRIKQILQRNKELQDIIA 396

Query: 392 IGG 394
           I G
Sbjct: 397 ILG 399


>gi|313825421|gb|EFS63135.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL063PA1]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|296112610|ref|YP_003626548.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4]
 gi|295920304|gb|ADG60655.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4]
 gi|326560870|gb|EGE11235.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 7169]
 gi|326563892|gb|EGE14143.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 46P47B1]
 gi|326566901|gb|EGE17040.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 103P14B1]
 gi|326569769|gb|EGE19819.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC8]
 gi|326570800|gb|EGE20825.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC1]
 gi|326571625|gb|EGE21640.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC7]
 gi|326575096|gb|EGE25024.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis CO72]
 gi|326576818|gb|EGE26725.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 101P30B1]
 gi|326577729|gb|EGE27605.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis O35E]
          Length = 473

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 28/317 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +    I  + P    +    +  +TGI+VID+  P  
Sbjct: 80  ATLGRIMDVLGRPIDEAGPV-NAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLLCPFA 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205
            G ++G+F G+G+GK+  +     +       +S+   VGER RE  +F           
Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVN 198

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDS 258
            ED+      K  +V    +E P  R    LT +T+AEYF       + KG +VLL +D+
Sbjct: 199 TEDF---TQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVDN 255

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D
Sbjct: 256 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTQSGSITSVQAVYVPAD 313

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377
           +  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     +E   V+  + 
Sbjct: 314 DLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPQVIGEEHYSVARGVQ 373

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ R++E +DI  I G
Sbjct: 374 EVLQRYKELKDIIAILG 390


>gi|168182706|ref|ZP_02617370.1| V-type ATPase, B subunit [Clostridium botulinum Bf]
 gi|237796062|ref|YP_002863614.1| V-type ATP synthase subunit B [Clostridium botulinum Ba4 str. 657]
 gi|259710369|sp|C3L1B0|VATB_CLOB6 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|182674083|gb|EDT86044.1| V-type ATPase, B subunit [Clostridium botulinum Bf]
 gi|229260534|gb|ACQ51567.1| V-type sodium ATPase, B subunit [Clostridium botulinum Ba4 str.
           657]
          Length = 461

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 170/335 (50%), Gaps = 19/335 (5%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G+     G+V+ IN D  +V +     G  I    + F      +  S    GRV +
Sbjct: 34  LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91

Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
            LG P DG   +    K D+S   ++ V     R   ++  +TG+  ID    L  GQ++
Sbjct: 92  GLGNPKDGGPKIIPDEKRDISGIPINPVA----RNYPDEFIQTGVSAIDGLNTLVRGQKL 147

Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
            VF+GSG+  + L +  AR      SD    V+ + +G    E + FI+D+     + ++
Sbjct: 148 PVFSGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRA 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+ +  +++  I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+
Sbjct: 208 VLFINLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEV 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  RGYP  ++++L  + ER G    ++G+IT +  + +  D+   PI D    I +G I
Sbjct: 268 PGRRGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQI 327

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +L+R L ++G  PP+D L S+SRL DK    ++ +
Sbjct: 328 ILSRELYKKGIMPPIDVLPSLSRLKDKGIGKEKTR 362


>gi|22651724|gb|AAM26934.1| ATP synthase beta subunit [Aldrovanda vesiculosa]
          Length = 492

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           +   GR+ N LG+PID   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 101 STTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++     
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 217

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  ++   +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGDEHYEIAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|146271657|emb|CAL25310.1| atpD beta synthase chain [Pseudomonas mohnii]
          Length = 284

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 8/286 (2%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG PID    +G+ +    I    P    +    +  +TGI+VID+  P   G ++G+F 
Sbjct: 1   LGNPIDEAGPIGE-EERWGIHRAAPTFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFG 59

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224
           G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  +V    
Sbjct: 60  GAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQM 119

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G +P A GY  
Sbjct: 120 NEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQP 179

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  +VL+R +A 
Sbjct: 180 TLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAS 237

Query: 345 EGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            G YP VDPL S SR  D     +E       + +++ R++E +DI
Sbjct: 238 LGIYPAVDPLDSTSRQLDPNVIGNEHYDTARGVQYVLQRYKELKDI 283


>gi|76801167|ref|YP_326175.1| V-type ATP synthase subunit B [Natronomonas pharaonis DSM 2160]
 gi|121725555|sp|Q3ITC7|VATB_NATPD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|76557032|emb|CAI48607.1| H(+)-transporting two-sector ATPase subunit B.a (A-type ATP
           synthase) [Natronomonas pharaonis DSM 2160]
          Length = 471

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 146/276 (52%), Gaps = 16/276 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PIDG   + + D   EI+        R+  E+  +TG+  ID    L  G
Sbjct: 85  LGRVLSGSGEPIDGGPEI-EPDEEREIVGAAINPTAREYPEEFIQTGVSAIDGMNTLIRG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK-------------VIISLVGERGREVREFIED 208
           Q++ +F+GSG+  + L    AR     +             VI   +G    E  EF++D
Sbjct: 144 QKLPIFSGSGLPHNELALQIARQASVPEEESGDDEAGSEFAVIFGAMGITQEEANEFMDD 203

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +     L++SVV +  +D+  + R + P  A+T AEY +  +G +VL+IL  +T +  ++
Sbjct: 204 FERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEEGYHVLVILTDMTNYCEAL 263

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI     E+P  RGYP  ++++L +L ER G  E  +G++T +  + + GD+   PI D
Sbjct: 264 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPD 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
               I +G I ++R+L  +G  PP++ L S+SRL D
Sbjct: 324 LTGYITEGQIYIDRNLNSQGIEPPINVLPSLSRLMD 359


>gi|289616256|emb|CBI57052.1| unnamed protein product [Sordaria macrospora]
          Length = 519

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 16/307 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN  G PID    + K D    I +  P  + +    +   TGI+V+D+  P  
Sbjct: 128 ATLGRIINVTGDPIDERGPI-KTDKFRSIHADAPEFVEQSTTAEILVTGIKVVDLLAPYA 186

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +       
Sbjct: 187 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 245

Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
             D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E
Sbjct: 246 QLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 305

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  ++ ++ ERI  +   KG+IT+V +V V  D+  DP   + 
Sbjct: 306 VSALLGRIPSAVGYQPTLAVDMGQMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 363

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R ++E G YP VDPL S SR+ D      E  +  + +  ++  ++  +
Sbjct: 364 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYETATRVQQILQEYKSLQ 423

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 424 DIIAILG 430


>gi|221061747|ref|XP_002262443.1| ATP synthase beta chain, mitochondrial [Plasmodium knowlesi strain
           H]
 gi|193811593|emb|CAQ42321.1| ATP synthase beta chain, mitochondrial,putative [Plasmodium
           knowlesi strain H]
          Length = 559

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 163/316 (51%), Gaps = 31/316 (9%)

Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLC 159
           GR++N +G+PID  GD    K   ++ I  + PP    Q  E     TGI+V+D+  P  
Sbjct: 165 GRIMNVIGEPIDECGDIKCKK---TLPI-HREPPLFTDQSTEPALLITGIKVVDLIAPYA 220

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGD--- 212
            G +IG+F G+G+GK T+L M   ++   K     + + VGER RE  +   + +     
Sbjct: 221 KGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMITTGVI 279

Query: 213 ------------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
                       N  K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+I
Sbjct: 280 KKKKIGNGEYDFNGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFVDNI 339

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+
Sbjct: 340 YRFTQAGSEVSALLGRIPSAVGYQPTLSTDLGALQERI--TTTKNGSITSVQAVYVPADD 397

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
             DP   +  S LD   VL+RS+AE G YP VDPL S SR L      A++ ++  ++  
Sbjct: 398 LTDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGAEQYEVARNVQQ 457

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 458 ILQDYKSLQDIIAILG 473


>gi|7688341|emb|CAB89740.1| ATP synthase beta subunit [Turnera ulmifolia]
          Length = 485

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D      I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---DLGPVDTCTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL---- 210
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +      
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKDSGV 213

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 214 INADNITQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQSVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTQEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +  +    DE       +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRQIVGDEHYDTAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|299065197|emb|CBJ36363.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           CMR15]
          Length = 467

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPIA-ADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D +    +  ++   +   + R++E RDI  I G
Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVADRVKKTLQRYKELRDIIAILG 385


>gi|282853802|ref|ZP_06263139.1| ATP synthase F1, beta subunit [Propionibacterium acnes J139]
 gi|282583255|gb|EFB88635.1| ATP synthase F1, beta subunit [Propionibacterium acnes J139]
 gi|315092941|gb|EFT64917.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL060PA1]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 10/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           G V N  G  ++ D S+ +      I  + PPA +    E +  +TGI+V+D+ TP   G
Sbjct: 104 GHVWNVTGDVLNADPSIIEVTERWPI-HRDPPAFDDLEPETEMLETGIKVLDLLTPYVKG 162

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +      LK +
Sbjct: 163 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDT 222

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T  G +
Sbjct: 223 ALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRM 282

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + LD   
Sbjct: 283 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATT 340

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI  I G
Sbjct: 341 ELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILG 399


>gi|246880751|gb|ACS95063.1| ATP synthase CF1 beta subunit [Dunaliella salina]
          Length = 480

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  S  I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 95  LGRIFNVLGEPVDNLGPVNAGQ-SNPIHRQAPTFVDLDTRLSIFETGIKVVDLLAPYRRG 153

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +         +
Sbjct: 154 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYGEMKESGVIQEN 213

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 214 NLPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 273

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP + +  
Sbjct: 274 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPASATTF 331

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   EK     S++   + R++E +
Sbjct: 332 THLDACTVLSRGLASKGIYPAVDPLDSTSTML-QPWIIGEKHYSAASNVKETLQRYKELQ 390

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 391 DIIAILG 397


>gi|323356859|ref|YP_004223255.1| F0F1-type ATP synthase, beta subunit [Microbacterium testaceum
           StLB037]
 gi|323273230|dbj|BAJ73375.1| F0F1-type ATP synthase, beta subunit [Microbacterium testaceum
           StLB037]
          Length = 482

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 16/300 (5%)

Query: 102 CGRVINAL-GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            G V+NA  G+ I+  +  G       I  K P     +   + F+TGI+ ID+ TP   
Sbjct: 106 TGEVLNAAPGEQIEVTERWG-------IHRKAPSFDQLESKTEMFETGIKSIDLLTPYVQ 158

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGDNLKK 216
           G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I E        K
Sbjct: 159 GGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIGEMEEAGVFDK 218

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 219 TALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGR 278

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD  
Sbjct: 279 MPSAVGYQPNLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAHLDAT 336

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             L+R +A +G YP +DPL S SR+ D  +  AD  ++ +++  ++ + +E ++I  I G
Sbjct: 337 TELSREIASKGLYPAIDPLTSTSRILDPRYIGADHYRVATAVKQILQKNKELQEIIAILG 396


>gi|118579288|ref|YP_900538.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379]
 gi|118501998|gb|ABK98480.1| ATP synthase F1, beta subunit [Pelobacter propionicus DSM 2379]
          Length = 466

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 153/300 (51%), Gaps = 10/300 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P +  C GR+++A G P+D    L  G+    I +   P           +TGI+VID+ 
Sbjct: 89  PVSPQCLGRLLDAFGAPLDDGPPL-SGNERRPIHAHPAPFHETTAASGILETGIKVIDLL 147

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
           +P   G + G+F G+G+GK+ L+  F  +       +S+   VGER RE  E   +    
Sbjct: 148 SPFVRGGKTGLFGGAGVGKTVLIMEFMHAIVALHRGVSVFAGVGERIREGHELWHEMRDA 207

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             +  +++V+   DESP +R    L A+T AEY   S G  VL ++D++ RFA +  EI+
Sbjct: 208 GVMPHTLIVLGQMDESPGIRFRVGLAALTYAEYLRDSLGTEVLFLMDNVFRFAQAGSEIS 267

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P   GY  ++ SE+  L +RI       G +T+V +V V  D+ +DP  +++  
Sbjct: 268 GLLGRIPATVGYQPTLMSEVAELEDRI--ISTRSGALTSVQAVYVPADDMSDPAVNAILG 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            LD  ++L+RS A +G YP VDPL S + L D+    D     +  +   + R+ E  D+
Sbjct: 326 HLDSMVILSRSQASKGIYPAVDPLQSTTSLMDRRVLGDRHYAAAEGVREHLARYRELEDM 385


>gi|4519316|dbj|BAA75573.1| ATP synthase beta-subunit [Gonium multicoccum]
          Length = 376

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 QLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|289428559|ref|ZP_06430243.1| ATP synthase F1, beta subunit [Propionibacterium acnes J165]
 gi|289158253|gb|EFD06472.1| ATP synthase F1, beta subunit [Propionibacterium acnes J165]
 gi|313807740|gb|EFS46227.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL087PA2]
 gi|313818777|gb|EFS56491.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL046PA2]
 gi|313820549|gb|EFS58263.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL036PA1]
 gi|314924914|gb|EFS88745.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL036PA3]
 gi|315088511|gb|EFT60487.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL072PA1]
 gi|332675643|gb|AEE72459.1| ATP synthase subunit beta [Propionibacterium acnes 266]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|23503635|dbj|BAC20414.1| ATP synthase beta-subunit [Chlorogonium euchlorum]
          Length = 376

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + ++ I  + P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVQQNQTLPIHRQAPLFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 148 EKNLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   ++  +   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYTTAQNVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|320409252|gb|ADW27218.1| ATP synthase beta subunit [Carinoma mutabilis]
          Length = 427

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 149/286 (52%), Gaps = 24/286 (8%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTG 148
            RI       GR+IN +G+PID      +G +  E    I +  P  +     ++   TG
Sbjct: 55  IRIPVGPETLGRIINVIGEPIDE-----RGPIPTERRSAIHADAPEFVEMSVAQEMLVTG 109

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +
Sbjct: 110 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 168

Query: 205 FIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
              +        L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +
Sbjct: 169 LYHEMITSGVISLKDDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 228

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V 
Sbjct: 229 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVP 286

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 287 ADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRIMD 332


>gi|314962577|gb|EFT06677.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL082PA1]
          Length = 489

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400

Query: 391 LIGG 394
            I G
Sbjct: 401 AILG 404


>gi|313822646|gb|EFS60360.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL036PA2]
 gi|314960561|gb|EFT04663.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL002PA2]
 gi|314978732|gb|EFT22826.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL072PA2]
 gi|314987900|gb|EFT31991.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA2]
 gi|314989711|gb|EFT33802.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA3]
 gi|315084747|gb|EFT56723.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL027PA2]
 gi|315085431|gb|EFT57407.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL002PA3]
 gi|327331720|gb|EGE73457.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL096PA3]
 gi|327443496|gb|EGE90150.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL013PA2]
 gi|328754708|gb|EGF68324.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL020PA1]
          Length = 489

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400

Query: 391 LIGG 394
            I G
Sbjct: 401 AILG 404


>gi|50364930|ref|YP_053355.1| F0F1 ATP synthase subunit beta [Mesoplasma florum L1]
 gi|81827328|sp|Q6F202|ATPB_MESFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|50363486|gb|AAT75471.1| ATP synthase beta chain [Mesoplasma florum L1]
          Length = 479

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 155/303 (51%), Gaps = 18/303 (5%)

Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N  G  ID      GK    M I    P         +  +TGI+VID+  P   
Sbjct: 98  LGRMFNVTGHAIDEKPEFTGK---RMPIHRDAPAYEELITNAEILETGIKVIDLMIPFAK 154

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGDN 213
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE      EFIE  +   
Sbjct: 155 GGKIGLFGGAGVGKTVLIQELINNIAKAHSGVSVFAGVGERTREGNDLYHEFIEAGV--- 211

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
           L K+ +V    +E P  R    LT +TIAE+F   K  +VLL +D+I RF  +  E++  
Sbjct: 212 LDKTSLVFGQMNEPPGARMRVALTGLTIAEHFRDEKNMDVLLFIDNIFRFTQAGSEVSAL 271

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + L
Sbjct: 272 LGRMPSAVGYQPTLSTEMGSLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFTHL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391
           D  IVL+RS+A  G YP VDPL+S SR+ D     +E   V+  +   + ++++ + I  
Sbjct: 330 DAKIVLDRSIASLGIYPAVDPLSSSSRMLDPEIIGEEHYNVALGVQGTLQKYQDLQSIIA 389

Query: 392 IGG 394
           I G
Sbjct: 390 ILG 392


>gi|332701910|ref|ZP_08421998.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay]
 gi|332552059|gb|EGJ49103.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 141/265 (53%), Gaps = 10/265 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N  G+PID        D+    + + P P   R   E+ F TGI+ ID+ TPL  
Sbjct: 84  LGRMFNVFGEPIDNQPP--PTDVVRRSIHRAPLPLSERTPGEEIFLTGIKAIDLLTPLER 141

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216
           G + G+F G+G+GK+ L++    +       +S    +GER RE +E  ++ +    LK 
Sbjct: 142 GGKAGLFGGAGVGKTVLITELIHNMAGKYSGVSFFAGIGERIREGQELYQEMIDTGVLKN 201

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    DE P  R     TA+T+AE+F    G +VLL++D+I RF  +  E++T  G 
Sbjct: 202 TVLVFGQMDEPPGSRFRVGHTALTMAEFFRDDLGQDVLLLIDNIFRFIQAGSELSTLLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           LP   GY  ++ +EL +L ERI  S    G IT++ +V V  D+  DP A    S L   
Sbjct: 262 LPSRLGYQPTMGNELSQLEERI--SSSRNGAITSIQAVYVPADDLTDPSAVHTFSHLSAS 319

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL 360
           IVL+R  A +  YP VDPL S S +
Sbjct: 320 IVLSRKRASQSLYPAVDPLQSTSMM 344


>gi|332527643|ref|ZP_08403689.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2]
 gi|332112046|gb|EGJ12022.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2]
          Length = 466

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 17/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    + +   +  I  K P        ++  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDERGPVDQTHTAT-IHRKAPAYDELSPSQELLETGIKVIDLICPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY------ 209
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +       
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMSDSNVV 198

Query: 210 LGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
           + +NL +S V  V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  
Sbjct: 199 VQENLSESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGT 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 259 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 316

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D     +E      ++   + R++E 
Sbjct: 317 TFAHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPNVVGEEHYSTTRAVQATLQRYKEL 376

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 377 RDIIAILG 384


>gi|16330679|ref|NP_441407.1| F0F1 ATP synthase subunit beta [Synechocystis sp. PCC 6803]
 gi|114570|sp|P26527|ATPB_SYNY3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|47516|emb|CAA41137.1| ATPase subunit beta [Synechocystis sp. PCC 6803]
 gi|1653171|dbj|BAA18087.1| ATP synthase b subunit [Synechocystis sp. PCC 6803]
          Length = 483

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 157/306 (51%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G+ +  I    P  ++ +   + F+TGI+VID+ TP   G
Sbjct: 97  LGRIFNVLGEPVDNKGPVPAGE-TFPIHRPAPKLVDLETKPQVFETGIKVIDLLTPYRQG 155

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ ++     +         +   VGER RE  +   + +  N+    
Sbjct: 156 GKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESNVINAD 215

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 216 KPEESKIALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 275

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 276 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 333

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LDG  VL+R LA +G YP VDPL S S +   +    E       +   + R++E +D
Sbjct: 334 AHLDGTTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGSEHYDTAREVQSTLQRYKELQD 393

Query: 389 IRLIGG 394
           I  I G
Sbjct: 394 IIAILG 399


>gi|91178116|gb|ABE27293.1| mitochondrial F-ATPase beta subunit [Candida inconspicua]
          Length = 337

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 163/308 (52%), Gaps = 22/308 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLC 159
            GR++N +G P+D     G  D    + + + PPA   Q  E +  +TGI+V+D+  P  
Sbjct: 19  LGRILNVIGDPVD---ERGPIDCKERKPIHQDPPAFVEQSTEAEVLETGIKVVDLLAPYA 75

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  + 
Sbjct: 76  RGGKIGLFGGAGVGKTVFIQELINNVAKAHGGFSVFTG-VGERTREGNDLYREMKETGV- 133

Query: 212 DNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
            NL+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  
Sbjct: 134 INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGS 193

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +
Sbjct: 194 EVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPAT 251

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R ++E G YP VDPL S SRL D A    E   + + +   +  ++  
Sbjct: 252 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYDVATQVQETLQAYKSL 311

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 312 QDIIAILG 319


>gi|325264619|ref|ZP_08131349.1| V-type sodium ATPase, B subunit [Clostridium sp. D5]
 gi|324030281|gb|EGB91566.1| V-type sodium ATPase, B subunit [Clostridium sp. D5]
          Length = 457

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 18/350 (5%)

Query: 61  QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GDD 117
           +V+ IN +  +V +     G  +S   + F      +  S    GRV + LG+PID G +
Sbjct: 43  KVLEINGNDALVQLFESATGINLSNSKVRFLGRSMELGVSEDMLGRVFDGLGRPIDEGPE 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    + +  +   P A  R   E+  +TG+  ID    L  GQ++ +F+ SG+  + L
Sbjct: 103 ILPDARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHAQL 160

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR      S+    V+ + +G    E   FIE +     + ++V+ V  +++  I 
Sbjct: 161 AAQIARQAKVLGSNENFAVVFAAMGITFEESNFFIESFKATGAIDRTVLFVNLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D +VL+IL  IT +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RIATPRMALTAAEYLAFEKDMHVLVILTDITNYADALREVSAARKEVPGRRGYPGYMYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G    +KG+IT +  + +  D+   PI D    I +G I+L+R L  +G  P
Sbjct: 281 LASLYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYRKGITP 340

Query: 350 PVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           P+D L S+SRL DK        AD    ++ L     R ++ +++ +I G
Sbjct: 341 PIDVLPSLSRLKDKGIGEGKTRADHSNTLNQLFAAYARGKDAKELMVILG 390


>gi|315077791|gb|EFT49842.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL053PA2]
          Length = 489

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400

Query: 391 LIGG 394
            I G
Sbjct: 401 AILG 404


>gi|255070295|ref|XP_002507229.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
 gi|226522504|gb|ACO68487.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
          Length = 536

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 19/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    + +   ++ I  + PP +++    +   TGI+V+D+  P   G 
Sbjct: 148 GRIMNVIGEPIDECGPI-ETSSTLAIHREAPPFVDQSTEMEMLVTGIKVVDLLAPYQKGG 206

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+     L++  A++     V    VGER RE      E IE     LG
Sbjct: 207 KIGLFGGAGVGKTVFIMELINNIAKAHGGFSVFAG-VGERTREGNDLYHEMIEGGVIKLG 265

Query: 212 DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +     K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 266 NQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLLFVDNIFRFTQANSE 325

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V ++ V  D+  DP   + 
Sbjct: 326 VSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAIYVPADDLTDPAPATT 383

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R +AE G YP VDPL S SR L+  A   +       +  ++  ++  +
Sbjct: 384 FAHLDATTVLSRGIAELGIYPAVDPLDSTSRMLSPLALGEEHYATARGVQKVLQDYKNLQ 443

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 444 DIIAILG 450


>gi|241664766|ref|YP_002983126.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12D]
 gi|309780425|ref|ZP_07675175.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA]
 gi|240866793|gb|ACS64454.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12D]
 gi|308920818|gb|EFP66465.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA]
          Length = 469

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 94  GRIMDVLGRPIDEAGPIAS-DEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 152

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 212 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 271

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E  ++   +   + R++E RDI  I G
Sbjct: 330 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILG 387


>gi|116073664|ref|ZP_01470926.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RS9916]
 gi|116068969|gb|EAU74721.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RS9916]
          Length = 486

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + K   +  I  + P     +   K F+TGI+VID+  P  
Sbjct: 95  ATLGRIFNVLGEPVDEQGPV-KATATAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 154 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 213

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            ++L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 214 SEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ER+  + +  G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERVASTLE--GSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VLNR+LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 332 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|16416736|gb|AAL18392.1|AF313544_1 ATP synthase beta chain [Isoetes engelmannii]
          Length = 395

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D   S+     +  I    P           F+TGI+V+D+  P  
Sbjct: 5   ATLGRIFNVLGEPVDNSGSV-DASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +     +  
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIN 123

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEQHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|83816835|ref|YP_446528.1| F0F1 ATP synthase subunit beta [Salinibacter ruber DSM 13855]
 gi|294508462|ref|YP_003572520.1| ATP synthase beta chain [Salinibacter ruber M8]
 gi|118573742|sp|Q2RZV3|ATPB_SALRD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|83758229|gb|ABC46342.1| ATP synthase F1, beta subunit [Salinibacter ruber DSM 13855]
 gi|294344790|emb|CBH25568.1| ATP synthase beta chain [Salinibacter ruber M8]
          Length = 500

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 181/356 (50%), Gaps = 48/356 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N +G+PIDG   L + D+     + + PP  N     ++  +TGI+V+D+  P+  
Sbjct: 93  GRLFNVVGQPIDG---LPEPDVDERRAIHQDPPEYNELTGSQEVLETGIKVMDLIQPVPK 149

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL--- 210
           G ++G+F G+G+GK+ L+     +         + S VGER RE    +RE IE  +   
Sbjct: 150 GGKVGLFGGAGVGKTVLIMELINNIAKAHEGLSVFSGVGERTREGNDLLREMIEAGVMTY 209

Query: 211 GDNLKKSV----------------------VVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           G+  ++S+                      +V    +E P  R    LT +TIAEYF   
Sbjct: 210 GEEFRESMESGGWDLDKVDFDEMNSESNISLVFGQMNEPPGARARVGLTGLTIAEYFRDL 269

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G +VL  LD+I RF  + +E++   G +P A GY  ++ SE+  L ERI  +  ++G+I
Sbjct: 270 GGRDVLFFLDNIFRFVQAGQEMSALMGRMPSAVGYQPTLASEMGDLQERI--TSTQEGSI 327

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWS 366
           T+  +V V  D+  DP   +  + LD   VL+R L+ +G YP +DPL S S+ L ++A  
Sbjct: 328 TSFQAVYVPADDLTDPAPATTFAHLDCTTVLSRQLSTQGIYPAIDPLDSTSQMLNERALG 387

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
            +  +    +  ++ R+EE +DI  I     G+D + D   +AV++   +  FL Q
Sbjct: 388 TEHYETAQDVKEILQRYEELQDIIAI----LGMDELSDEDKQAVNRARRVQRFLSQ 439


>gi|302392947|ref|YP_003828767.1| ATP synthase F1 subunit beta [Acetohalobium arabaticum DSM 5501]
 gi|302205024|gb|ADL13702.1| ATP synthase F1 subcomplex beta subunit [Acetohalobium arabaticum
           DSM 5501]
          Length = 473

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 12/306 (3%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDI 154
           P    C GR+ N LG  ID    +   D     + + PP    Q      F+TGI+V+D+
Sbjct: 87  PVGKDCLGRIFNVLGDTIDQQGEVDADDYRP--IHQDPPEFEEQSTSTEIFETGIKVVDL 144

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYL 210
             P   G ++G+F G+G+GK+ L+         +     + S VGER RE  + ++E   
Sbjct: 145 LAPYVSGGKVGLFGGAGVGKTVLIMELINRIATEHGGFSVFSGVGERTREGNDLWLEMKE 204

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
              L K  +V    +E P  R    LT +T+AE+F  + G +VL+ +D+I RF  +  E+
Sbjct: 205 SGVLDKVALVYGQMNEPPGARMRVGLTGLTMAEHFRDEFGSDVLMFIDNIFRFIQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +  
Sbjct: 265 SALLGRMPSAVGYQPTLATDVGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RSL E+G YP VDPL S S + D     +    V+  +   + R+++ +D
Sbjct: 323 AHLDATTVLSRSLTEKGIYPAVDPLDSTSTILDPGIIGERHYNVAREVQETLQRYQDLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|269104942|ref|ZP_06157638.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268161582|gb|EEZ40079.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 372

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 154/295 (52%), Gaps = 10/295 (3%)

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           +N LG+PID    +G+ +    I    P    +       +TG++VID+  P   G +IG
Sbjct: 1   MNVLGEPIDECGEIGE-ETRYAIHRSAPSYEEQANSTALLETGVKVIDLICPFAKGGKIG 59

Query: 166 VFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVV 220
           +F G+G+GK+     L++  A++     V    VGER RE  +F  E      L K  +V
Sbjct: 60  LFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKVSMV 118

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +TIAE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 119 YGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 178

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +VL+R
Sbjct: 179 GYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSR 236

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           ++A  G YP +DPL S SR  D      E  ++   +  ++ R++E +DI  I G
Sbjct: 237 NIAALGLYPAIDPLDSTSRQLDPLVVGTEHYEVARGVQTVLQRYKELKDIIAILG 291


>gi|313764229|gb|EFS35593.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL013PA1]
 gi|313791921|gb|EFS40022.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA1]
 gi|313812724|gb|EFS50438.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL025PA1]
 gi|313816322|gb|EFS54036.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL059PA1]
 gi|314915707|gb|EFS79538.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA4]
 gi|315080418|gb|EFT52394.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL078PA1]
 gi|315101472|gb|EFT73448.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL046PA1]
 gi|315105845|gb|EFT77821.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL030PA1]
 gi|315108764|gb|EFT80740.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL030PA2]
 gi|327450558|gb|EGE97212.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL087PA3]
 gi|328753975|gb|EGF67591.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL087PA1]
          Length = 489

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400

Query: 391 LIGG 394
            I G
Sbjct: 401 AILG 404


>gi|300789594|ref|YP_003769885.1| F-type H+-transporting ATPase subunit beta [Amycolatopsis
           mediterranei U32]
 gi|299799108|gb|ADJ49483.1| F-type H+-transporting ATPase subunit beta [Amycolatopsis
           mediterranei U32]
          Length = 475

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 161/302 (53%), Gaps = 17/302 (5%)

Query: 103 GRVINALGKPID----GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G V NALG+ +D    GDD    G     I    P     +   +  +TG++V+D+ TP 
Sbjct: 97  GHVYNALGECLDEPGYGDDLERWG-----IHRNAPSFDQLEGKTEMLETGLKVVDLLTPY 151

Query: 159 CHGQRIGVFAGSGIGKSTLL-SMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      +
Sbjct: 152 VQGGKIGLFGGAGVGKTVLIKEMITRVARNFGGTSVFAGVGERTREGNDLFLEMSEDGVI 211

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
             + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  
Sbjct: 212 NDTALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLL 271

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + LD
Sbjct: 272 GRMPSAVGYQPTLADEMGQLQERITSTRGR--SITSMQAIYVPADDYTDPAPAATFAHLD 329

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLI 392
               L+RS+ ++G +P VDPLAS S + D A    D  ++ S +  ++ +++E +DI  I
Sbjct: 330 ATTELSRSVFQKGIFPAVDPLASTSTILDPAIVGEDHYRVASEVIRILQKYKELQDIIAI 389

Query: 393 GG 394
            G
Sbjct: 390 LG 391


>gi|269792470|ref|YP_003317374.1| H(+)-transporting two-sector ATPase [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100105|gb|ACZ19092.1| H(+)-transporting two-sector ATPase [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 472

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+ N  G+PIDG   +   + S++I        +R    +  +TGI  ID   P
Sbjct: 83  SKDMLGRIFNGRGEPIDGGAPIIP-EASLDINGFPMNPYSRDYPSEFIQTGISTIDGMNP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYL 210
           L  GQ++ +F+GSG+  + + +  AR        + F  V+ + +G    E   F++D+ 
Sbjct: 142 LVRGQKLPIFSGSGLPHNRMAAQIARQATVISGHEAF-AVVFAAMGITFEEATFFMDDFR 200

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               ++++V+ V  +D+  I R   P  A+T AEY +  K  +VL+IL  +T +  ++RE
Sbjct: 201 KTGAIERTVMFVNLADDPAIERITTPRLALTCAEYLAFEKNMHVLVILTDLTNYCEALRE 260

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+    E+P  RGYP  ++++L  + ER G    + G+IT +  + +  D+   PI D  
Sbjct: 261 ISAARKEVPGRRGYPGYLYTDLATMYERAGRLRGKSGSITQLPILTMPEDDKTHPIPDLT 320

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRF 383
             I +G I+L+R L  +G YPPVD + S+SRL DK         D   L++ L     R 
Sbjct: 321 GYITEGQIILSRGLHRKGIYPPVDVMPSLSRLKDKGIGKGKTREDHADLMNQLFAAYARG 380

Query: 384 EETRDIRLIGG 394
           +E +++ +I G
Sbjct: 381 KEAKELAVILG 391


>gi|118619158|ref|YP_907490.1| F0F1 ATP synthase subunit beta [Mycobacterium ulcerans Agy99]
 gi|183984058|ref|YP_001852349.1| ATP synthase beta chain AtpD [Mycobacterium marinum M]
 gi|166201720|sp|A0PUK0|ATPB_MYCUA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740653|sp|B2HQK2|ATPB_MYCMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118571268|gb|ABL06019.1| ATP synthase beta chain AtpD [Mycobacterium ulcerans Agy99]
 gi|183177384|gb|ACC42494.1| ATP synthase beta chain AtpD [Mycobacterium marinum M]
          Length = 483

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 15/301 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMN--RQRVEKGFKTGIRVIDIFTPLC 159
           G V NALG   D  D  G G D     + + PPA      R E   +TG++V+D+ TP  
Sbjct: 104 GHVFNALG---DCLDEPGYGEDFEHWSIHRKPPAFEDLEPRTEM-LETGLKVVDLLTPYV 159

Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK
Sbjct: 160 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLK 219

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
            + +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G
Sbjct: 220 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLG 279

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD 
Sbjct: 280 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 337

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L+R++  +G +P VDPLAS S + D     DE  ++   +  ++ R+++ +DI  I 
Sbjct: 338 TTELSRAVFSKGIFPAVDPLASSSTILDPGVVGDEHYRVAQEVIRILQRYKDLQDIIAIL 397

Query: 394 G 394
           G
Sbjct: 398 G 398


>gi|289425481|ref|ZP_06427258.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK187]
 gi|289154459|gb|EFD03147.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK187]
 gi|313801597|gb|EFS42837.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA2]
 gi|313827384|gb|EFS65098.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL063PA2]
 gi|314917924|gb|EFS81755.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL050PA1]
 gi|314920307|gb|EFS84138.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL050PA3]
 gi|314931527|gb|EFS95358.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL067PA1]
 gi|314955538|gb|EFS99941.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL027PA1]
 gi|314957912|gb|EFT02015.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL002PA1]
 gi|315098758|gb|EFT70734.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL059PA2]
 gi|327453360|gb|EGF00015.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL092PA1]
 gi|327454103|gb|EGF00758.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL083PA2]
 gi|328753186|gb|EGF66802.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL025PA2]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|183206606|gb|ACC54501.1| ATP synthase beta subunit [Prismatocarpus fruticosus]
          Length = 477

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 198

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|172040396|ref|YP_001800110.1| F0F1 ATP synthase subunit beta [Corynebacterium urealyticum DSM
           7109]
 gi|226740183|sp|B1VFY7|ATPB_CORU7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|171851700|emb|CAQ04676.1| ATP synthase beta chain [Corynebacterium urealyticum DSM 7109]
          Length = 482

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 167/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D +  LG+ D     + + PPA +  +   +  +TG++VID+ TP   G
Sbjct: 104 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDELEGKTEILETGVKVIDLLTPYVKG 161

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 162 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +G +VLL +D+I RF  +  E++T  G +
Sbjct: 222 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRM 281

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD   
Sbjct: 282 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 339

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R++A +G YP V+PL S SR+ +     ++  ++   + +++ + +E +DI  I G
Sbjct: 340 ELDRAIASKGIYPAVNPLTSTSRILEPGIVGEKHYEVAQRVINILQKNKELQDIIAILG 398


>gi|183206558|gb|ACC54477.1| ATP synthase beta subunit [Campanula lanata]
          Length = 479

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 175/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 35  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 95  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 151

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVX-ERTREXNDLYXEMKDSGVINEQ 210

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 211 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 270

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 271 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 329 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 388

Query: 389 IRLIGG 394
           I  I G
Sbjct: 389 IITILG 394


>gi|197132370|gb|ACH47703.1| ATP synthase CF1 beta subunit [Erodium chrysanthum]
          Length = 498

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   SLG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---SLGPVDTRTTSPIHRSAPDFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDY 209
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE     +E  E  
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 220

Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|121607476|ref|YP_995283.1| F0F1 ATP synthase subunit beta [Verminephrobacter eiseniae EF01-2]
 gi|190358710|sp|A1WF58|ATPB_VEREI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|121552116|gb|ABM56265.1| ATP synthase F1, beta subunit [Verminephrobacter eiseniae EF01-2]
          Length = 471

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 157/308 (50%), Gaps = 17/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    + +  L+  I  K P        +   +TGI+VID+  P  
Sbjct: 86  ATLGRIMDVLGAPIDERGPVDQ-TLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFA 144

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD--- 212
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +       
Sbjct: 145 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 203

Query: 213 NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
           NL+K       +V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  
Sbjct: 204 NLEKLENSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 263

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 264 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 321

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D      E   V+ ++   + R++E 
Sbjct: 322 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGQEHYNVARAVQGTLQRYKEL 381

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 382 RDIIAILG 389


>gi|319954472|ref|YP_004165739.1| ATP synthase f1 subcomplex beta subunit [Cellulophaga algicola DSM
           14237]
 gi|319423132|gb|ADV50241.1| ATP synthase F1 subcomplex beta subunit [Cellulophaga algicola DSM
           14237]
          Length = 501

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 11/306 (3%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGI 149
           G+  +       GR+ +  G  ID  ++L   +L  + + ++PP ++++  +   F+TGI
Sbjct: 83  GQLSVPVGKELMGRMFDVFGNTIDHGEALP--ELPRKNVHQLPPPLSKRSTKSEIFETGI 140

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206
           + ID+  PL HG   G+F G+G+GK+ LL+    +       IS+   +GER RE  E  
Sbjct: 141 KAIDVMVPLQHGGNAGLFGGAGVGKTVLLTEMIHNMVGYHQGISMFCGIGERCREGHELY 200

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
            D    D LK  V++    +E P  R      A+T+AEYF   +  +VLL++D++ RF  
Sbjct: 201 HDMKKADVLKDMVMMFGQMNEPPGARFRVGHAALTMAEYFRDDEHRDVLLLIDNVFRFIQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G++P   GY  ++ +EL +L ERI  +  + G IT++ +V V  D+  DP 
Sbjct: 261 AGMEVSGLMGQMPSRLGYQPTLGTELAKLEERI--ANTDTGAITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
           A    S L   I L+R  A EG +P +D L S S++A      +    L+  +   + ++
Sbjct: 319 AVHTFSHLSASITLSRKRAGEGLFPAIDLLQSSSKMATPGVIGERHYHLLQQIKQTLAQY 378

Query: 384 EETRDI 389
           EE +DI
Sbjct: 379 EELKDI 384


>gi|314967560|gb|EFT11659.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL037PA1]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|183206580|gb|ACC54488.1| ATP synthase beta subunit [Campanula grossheimii]
          Length = 465

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 204 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 263

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 264 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 322 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 381

Query: 389 IRLIGG 394
           I  I G
Sbjct: 382 IITILG 387


>gi|167522261|ref|XP_001745468.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775817|gb|EDQ89439.1| predicted protein [Monosiga brevicollis MX1]
          Length = 495

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 19/308 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + K D    I ++ P   + +   +  +TGI+V+D+  P  
Sbjct: 109 ATLGRIMNVIGEPIDERGPI-KADKYAPIHAEAPELEDMKTEAEILETGIKVVDLLAPYA 167

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +     
Sbjct: 168 KGGKIGLFGGAGVGKTVLIMELINNVAKAHSGFSVFAG-VGERTREGNDLYHEMIEGGVI 226

Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
              GD+  K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I RF  +  
Sbjct: 227 QLEGDS--KVALVYGQMNEPPGARARVALTGLTVAESFRDQGRDVLLFIDNIFRFTQAGS 284

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+  DP   +
Sbjct: 285 EVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTVGSITSVQAVYVPADDLTDPAPAT 342

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R +AE G YP VDPL S SR+ D +   +   K    +  ++  ++  
Sbjct: 343 TFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDVSVVGERHYKTARDVQKILQDYKSL 402

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 403 QDIIAILG 410


>gi|163840193|ref|YP_001624598.1| F0F1 ATP synthase subunit beta [Renibacterium salmoninarum ATCC
           33209]
 gi|162953669|gb|ABY23184.1| ATP synthase beta chain [Renibacterium salmoninarum ATCC 33209]
          Length = 490

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 153/293 (52%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG+P+D  +S  +      I  K P     +   +  +TGI+ ID+ TP   G 
Sbjct: 109 GHIFNVLGQPLDVAESEIQYTERWPIHRKPPSFDQLEGSTEMLETGIKSIDLLTPYIKGG 168

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 169 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEESGVLKDTA 228

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 229 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 288

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD    
Sbjct: 289 SAVGYQPNLADEMGLLQERITSTKGR--SITSMQAVYVPADDYTDPAPAATFAHLDATTE 346

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
           L+R +A  G YP +DPL S SR+ D  +   D       +  ++ + +E +DI
Sbjct: 347 LSREIASRGLYPAIDPLTSTSRILDPQYIGKDHYDTAVRVKQILQKNKELQDI 399


>gi|50842719|ref|YP_055946.1| F0F1 ATP synthase subunit beta [Propionibacterium acnes KPA171202]
 gi|81826439|sp|Q6A8C7|ATPB_PROAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|50840321|gb|AAT82988.1| ATP synthase beta chain [Propionibacterium acnes KPA171202]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|90409081|ref|ZP_01217205.1| ATP synthase subunit B [Psychromonas sp. CNPT3]
 gi|90309808|gb|EAS37969.1| ATP synthase subunit B [Psychromonas sp. CNPT3]
          Length = 465

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 153/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    + +     EI  + P    +       + GI+VID+  P   G 
Sbjct: 84  GRILNVLGEPVDECGPV-EATEHYEIHREAPSYEEQAISVDTLEVGIKVIDLICPFARGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +   
Sbjct: 143 KIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVEN 202

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 203 PELSKVAMVYGQMNEPPGCRLRVALTGLTMAERFRDEGKDVLLFIDNIYRYTLAGTEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKLGSITSIQAVYVPADDLTDPSPATTFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  IVL+R +A  G YP +DPL S SR+ D      E   +   +  ++ R++E +DI 
Sbjct: 321 LDATIVLSRQIASLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSILQRYKELKDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|33865048|ref|NP_896607.1| F0F1 ATP synthase subunit beta [Synechococcus sp. WH 8102]
 gi|81835154|sp|Q7U8U7|ATPB_SYNPX RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33638732|emb|CAE07027.1| ATP synthase beta subunit [Synechococcus sp. WH 8102]
          Length = 487

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPV-NASATAPIHRDAPNLTELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ER+  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERV--ASTVEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386
             + LD   VLNR+LA +G YP VDPL S S +   A   DE    + L    + R++E 
Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARLVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|23503615|dbj|BAC20404.1| ATP synthase beta-subunit [Chlamydomonas kuwadae]
          Length = 376

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   DL + I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGPVDSTDL-LPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLQDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFVDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP    
Sbjct: 208 EVSALLGRVPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAV 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   +   +   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQQIKRTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|119475220|ref|ZP_01615573.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2143]
 gi|119451423|gb|EAW32656.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2143]
          Length = 465

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 16/339 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +S G +V   G     P      GR+++ LG PID    +G+ + +  
Sbjct: 49  VVRTIAMGSSEGVSRGLVVESTGAPISVPVGIETLGRIMDVLGNPIDECGPIGEKERA-S 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P        E   +TGI+VID+  P   G ++G+F G+G+GK+  +     +   
Sbjct: 108 IHRKAPAYDELSASEDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAL 167

Query: 188 DKVIISL---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPL 236
           +   +S+   VGER RE  +F  +     +         K  +V    +E P  R    L
Sbjct: 168 EHSGLSVFAGVGERTREGNDFYYEMQESGVVNIEEPSKSKVAMVYGQMNEPPGNRLRVAL 227

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ER
Sbjct: 228 TGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQER 287

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S
Sbjct: 288 I--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDS 345

Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            SR  D      E       +  ++ R++E +DI  I G
Sbjct: 346 TSRQLDPLIIGTEHYDTARGVQSVLQRYKELKDIIAILG 384


>gi|34581172|ref|ZP_00142652.1| ATP synthase beta chain [Rickettsia sibirica 246]
 gi|28262557|gb|EAA26061.1| ATP synthase beta chain [Rickettsia sibirica 246]
          Length = 473

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 80  RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ S++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLASDMGELQERI--TSTKYGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQVLQTYKSLQDIITILG 391


>gi|320582839|gb|EFW97056.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia angusta DL-1]
          Length = 503

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 164/310 (52%), Gaps = 26/310 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  +  + +   PP+   Q  E +  +TGI+V+D+  P
Sbjct: 117 LGRIINVVGEPIDE-----RGPIECKQRNPIHADPPSFVEQSTEAEVLETGIKVVDLLAP 171

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  
Sbjct: 172 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETG 230

Query: 210 LGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +  NL+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +
Sbjct: 231 V-INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQA 289

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +   KG++T+V +V V  D+  DP  
Sbjct: 290 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTRKGSVTSVQAVYVPADDLTDPAP 347

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SRL D +    E   + + +   +  ++
Sbjct: 348 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVSVVGQEHYDVATGVQQTLQAYK 407

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 408 SLQDIIAILG 417


>gi|158524738|gb|ABW71263.1| mitochondrial ATP synthase beta subunit [Terebratulina retusa]
          Length = 428

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 147/285 (51%), Gaps = 22/285 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTG 148
            RI       GR+IN +G+ ID      +G +  E    I  + P  +     ++  +TG
Sbjct: 55  IRIPVGQETLGRIINVIGEAIDE-----RGPIPTERRAAIHQEAPEFVEMSVAQEILETG 109

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE---- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE    
Sbjct: 110 IKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTRESNDL 169

Query: 202 VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257
             E IE     L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D
Sbjct: 170 YHEMIEGGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFID 229

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  
Sbjct: 230 NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTNKGSITSVQAIYVPA 287

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 288 DDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILD 332


>gi|183206594|gb|ACC54495.1| ATP synthase beta subunit [Wahlenbergia hederacea]
          Length = 467

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 198

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 199 GVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|114553|sp|P22663|VATB_METBA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|149821|gb|AAA72216.1| ATPase beta subunit [Methanosarcina barkeri]
          Length = 460

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 179/354 (50%), Gaps = 36/354 (10%)

Query: 60  GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           G+V+  + DIV I       G+ +E  +   VF     ++  S    GR+++  G+P+DG
Sbjct: 42  GEVLDSSSDIVVIQIFEGTTGLDKECGV---VFTGETLKLPASIDLLGRILSGSGEPLDG 98

Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFA 168
                 D  L     +M   +++PP        K F +TGI  ID    L  GQ++ +F+
Sbjct: 99  GPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRGQKLPIFS 150

Query: 169 GSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
            SG+  + +    AR      S+    V+ + +G    E + F+ D+     L+++VV +
Sbjct: 151 ASGLPHNEIALQIARQAAVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFL 210

Query: 222 ATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
             +D+  + R + P  A+T AEY +   G +VL+IL  IT +A ++R++     E+P  R
Sbjct: 211 NLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEIPGRR 270

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP  ++++L  L ER G  +  KG++T +  + + GD+   PI D    I +G IV++R
Sbjct: 271 GYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITEGQIVVSR 330

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDIR 390
            L  +G YPP++ L S+SRL +    A    ++ K VS    +   + E RD+R
Sbjct: 331 ELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDLR 382


>gi|240169504|ref|ZP_04748163.1| F0F1 ATP synthase subunit beta [Mycobacterium kansasii ATCC 12478]
          Length = 489

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 15/301 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMN--RQRVEKGFKTGIRVIDIFTPLC 159
           G V NALG  +D     G G D     + + PPA      R E   +TG++V+D+ TP  
Sbjct: 110 GHVFNALGNCLD---EPGYGADFEHWSIHRKPPAFEDLEPRTEM-LETGLKVVDLLTPYV 165

Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK
Sbjct: 166 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLK 225

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
            + +V    DE P  R    L+A+T+AE+F  + G +VLL +D+I RF  +  E++T  G
Sbjct: 226 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLG 285

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD 
Sbjct: 286 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 343

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L+R++  +G +P VDPLAS S + D     DE  ++   +  ++ R+++ +DI  I 
Sbjct: 344 TTELSRAVFSKGIFPAVDPLASSSTILDPGVVGDEHYRVAQEVIRILQRYKDLQDIIAIL 403

Query: 394 G 394
           G
Sbjct: 404 G 404


>gi|183206560|gb|ACC54478.1| ATP synthase beta subunit [Symphyandra armena]
          Length = 471

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 92  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148

Query: 163 RIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L    ++  A++     V   +  ER RE  +  ++     +    
Sbjct: 149 KIGLFGGAGVGKTVLIMELMNNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEK 207

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 385

Query: 389 IRLIGG 394
           I  I G
Sbjct: 386 IITILG 391


>gi|190358735|sp|A9WNC8|ATPB_RENSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 484

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 153/293 (52%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG+P+D  +S  +      I  K P     +   +  +TGI+ ID+ TP   G 
Sbjct: 103 GHIFNVLGQPLDVAESEIQYTERWPIHRKPPSFDQLEGSTEMLETGIKSIDLLTPYIKGG 162

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEESGVLKDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD    
Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGR--SITSMQAVYVPADDYTDPAPAATFAHLDATTE 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
           L+R +A  G YP +DPL S SR+ D  +   D       +  ++ + +E +DI
Sbjct: 341 LSREIASRGLYPAIDPLTSTSRILDPQYIGKDHYDTAVRVKQILQKNKELQDI 393


>gi|150024226|ref|YP_001295052.1| F0F1 ATP synthase subunit beta [Flavobacterium psychrophilum
           JIP02/86]
 gi|166201703|sp|A6GVV9|ATPB_FLAPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149770767|emb|CAL42232.1| ATP synthase beta subunit [Flavobacterium psychrophilum JIP02/86]
          Length = 503

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K GD  M I  + P   +     +   TGI+VID+  P   G
Sbjct: 91  GRLFNVIGDAIDGLGNLPKDGDNGMSIHRQAPRFEDLSTSSEVLFTGIKVIDLIEPYSKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210

Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
                            D  G    K+  V    +E P  R    L+ ++IAEYF     
Sbjct: 211 DDFMHSMENGGWDLSKVDMPGMRESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGAG 270

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
           S +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   KG
Sbjct: 271 SDQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTNKG 328

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPQI 388

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  ++ ++++ +DI  I G
Sbjct: 389 LGDEHYDCAQRVKEILQKYKQLQDIIAILG 418


>gi|119350459|gb|ABL63180.1| AtpB [Bulbochaete rectangularis var. hiloensis]
          Length = 392

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   +  + I    P  ++       F++GI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNMGPVNTEE-KLPIHRSAPAFVDLDTRLSIFESGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +ED 
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 158 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            S LD   VL+R LA +G YP VDPLAS S +       D        +   + R++E +
Sbjct: 274 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDTHYNCAQKVKETLQRYKELQ 333

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 334 DIIAILG 340


>gi|258690308|gb|ACV87916.1| ATP synthase beta subunit [Halichondria sp. KJP-2009]
          Length = 365

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 21/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+ ID    + K      I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 32  GRIMNVIGEAIDERGPI-KTQTQAPIHAEAPEFIEMSTQQEILVTGIKVVDLLAPYAKGG 90

Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209
           +IG+F G+G+GK+ ++         A   C    + + VGER RE  +   +        
Sbjct: 91  KIGLFGGAGVGKTVVIMELINNVAHAHGGC---SVFAGVGERTREGNDLYHEMIQGGVIS 147

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF  +  E
Sbjct: 148 LKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSE 207

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  + ERI  +   KG+IT+V +V V  D+  DP   + 
Sbjct: 208 VSALLGRIPSAVGYQPTLATDMGSMQERI--TTTLKGSITSVQAVFVPADDLTDPAPATT 265

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETR 387
            + LD   VL+R+++E G YP VDPL   SR+ D     +E   V+  T  ++  +   +
Sbjct: 266 FAHLDATTVLSRAISELGIYPAVDPLDPSSRIMDANIVGEEHYNVARGTQKILQDYRSLQ 325

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 326 DIIAILG 332


>gi|119350547|gb|ABL63224.1| AtpB [Spermatozopsis similis]
          Length = 393

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  ++  ++ I  K P  ++       F+TGI+V+D+  P  
Sbjct: 38  LGRIFNVLGEPVD---NMGPVEVKETLPIHRKSPAFVDLDTRLSIFETGIKVVDLLAPYR 94

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 95  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 154

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 155 EKSLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQA 212

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 213 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 270

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   +K      S+   + R+
Sbjct: 271 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGDKHYQGAQSVKRTLQRY 329

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 330 KELQDIIAILG 340


>gi|114769416|ref|ZP_01447042.1| F0F1 ATP synthase subunit beta [alpha proteobacterium HTCC2255]
 gi|114550333|gb|EAU53214.1| F0F1 ATP synthase subunit beta [alpha proteobacterium HTCC2255]
          Length = 477

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 162/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR++N  G+P+D    LG  K   S  I  + P    +    +   TGI+V+D+  P  
Sbjct: 89  LGRIMNVTGQPVD---ELGPVKTTTSRPIHGEAPLFEEQSTETEILVTGIKVVDLLAPYT 145

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE   
Sbjct: 146 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGLSVFAGVGERTREGNDLYHEMIESGV 203

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
            + DN++ S   +V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 204 IVPDNMEDSKIALVYGQMNEPPGARMRIALTGLTLAEQFRDESGSDVLFFVDNIFRFTQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT+V +V V  D+  DP  
Sbjct: 264 GAEVSALLGRIPSAVGYQPTLATDMGAMQERI--ASTKAGSITSVQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+RS++E+G YP VDPL S SRL D     +E   + + +  ++ R++
Sbjct: 322 ATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLILGEEHYNVATDVQQILQRYK 381

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 382 SLQDIIAILG 391


>gi|88602473|ref|YP_502651.1| V-type ATP synthase subunit B [Methanospirillum hungatei JF-1]
 gi|121729141|sp|Q2FP51|VATB1_METHJ RecName: Full=V-type ATP synthase beta chain 1; AltName:
           Full=V-ATPase subunit B 1
 gi|88187935|gb|ABD40932.1| Sodium-transporting two-sector ATPase [Methanospirillum hungatei
           JF-1]
          Length = 460

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 36/376 (9%)

Query: 42  YVCLGDFVVHQGKNSDNLGQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISP 97
           Y  L + V+  G  S+  GQV+  + DIV +       GIG++  +    F     ++  
Sbjct: 25  YQELVNLVLADG--SEKRGQVLDTSDDIVVVQVFETTTGIGKDTGV---RFTGETIKMPV 79

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
                GR+++  GKP DG   +   +  +EI         R    +  +TGI  ID+   
Sbjct: 80  GKDMLGRILSGAGKPKDGGPDIVP-EKRLEITGAAINPWARGSPRQFIQTGISTIDLTNT 138

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDY-L 210
           L  GQ++ +F+GSG+  + +    AR      SD    V+ + +G    E  +F+ ++  
Sbjct: 139 LVRGQKLPIFSGSGLPHNEIALQIARQAKVPGSDEQFAVVFAAMGITKEEENQFMAEFER 198

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
              L+ +VV +  +D+  + R + P  A+T AEY + + D +VL+IL  +T +  ++R+I
Sbjct: 199 TGALEHAVVFLNLADDPAVERIITPRLALTTAEYLAFELDYHVLVILTDMTNYCEALRQI 258

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
                E+P  RGYP  ++++L  L ER G  + +KG++T +  + + GD+   PI D   
Sbjct: 259 GAAREEVPGRRGYPGYMYTDLASLYERAGIIKGKKGSVTQLSILTMPGDDITHPIPDLSG 318

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEE 385
            I +G IV+NR L  +G YPP++ L S+SRL +    K ++ ++ K VS           
Sbjct: 319 YITEGQIVVNRDLHRKGIYPPINVLPSLSRLMNLGIGKGFTREDHKKVSD---------- 368

Query: 386 TRDIRLIGGYRPGVDL 401
               +L  GY  GVDL
Sbjct: 369 ----QLYAGYAEGVDL 380


>gi|326479862|gb|EGE03872.1| ATP synthase subunit beta [Trichophyton equinum CBS 127.97]
          Length = 520

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427

Query: 390 RLIGG 394
             I G
Sbjct: 428 IAILG 432


>gi|317404545|gb|EFV84952.1| ATP synthase subunit beta [Achromobacter xylosoxidans C54]
          Length = 466

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + D    I    P         +  +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEAGEI-QHDEKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 269 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RDI  I G
Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 384


>gi|300781408|ref|ZP_07091262.1| ATP synthase F1 sector beta subunit [Corynebacterium genitalium
           ATCC 33030]
 gi|300533115|gb|EFK54176.1| ATP synthase F1 sector beta subunit [Corynebacterium genitalium
           ATCC 33030]
          Length = 507

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 162/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG+ +D D S+GK      I  + P   + +   +  +TGI+VID+ TP   G 
Sbjct: 129 GHVFNALGECLD-DPSVGKDGDRWGIHREPPEFKDLEGKTEILETGIKVIDLLTPYVKGG 187

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L  + 
Sbjct: 188 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEDMGVLPDTA 247

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 248 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 307

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD    
Sbjct: 308 SAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 365

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           L+RS+A +G YP VDPL S SR+ +     +    V+  + +++ + +E +DI  I G
Sbjct: 366 LSRSIASKGIYPAVDPLTSTSRILEPGIVGERHYGVAQKVINILQKNKELQDIIAILG 423


>gi|225012364|ref|ZP_03702800.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-2A]
 gi|225003341|gb|EEG41315.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-2A]
          Length = 524

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG + L K  +  + I    P   +     +   TGI+VID+  P   G
Sbjct: 112 GRLFNVIGDAIDGMEDLPKENENGLPIHRDAPAFEDLSTSTEVLFTGIKVIDLIEPYAKG 171

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 172 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 231

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 232 DDFMHSMEEGGWDLTKVDKAAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 291

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 292 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 349

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 350 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 409

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +  K   ++  L+ R++E +DI  I G
Sbjct: 410 LGEEHYKCAQNVKELLQRYKELQDIIAILG 439


>gi|313622362|gb|EFR92837.1| ATP synthase F1, beta subunit [Listeria innocua FSL J1-023]
          Length = 346

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   IS+   VGER RE
Sbjct: 8   LETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTRE 67

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
             + + E      ++K+ +V    +E P  R    LT +TIAEYF   +  +VLL +D+I
Sbjct: 68  GNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNI 127

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+ +L ERI  +    G++T++ ++ V  D+
Sbjct: 128 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADD 185

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L R L E+G YP VDPLAS SR L+      +  ++ + +  
Sbjct: 186 YTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYEVATEVQR 245

Query: 379 LIHRFEETRDIRLIGG 394
           L+ R++E +DI  I G
Sbjct: 246 LLQRYKELQDIIAILG 261


>gi|313199631|ref|YP_004021247.1| ATP synthase CF1 beta subunit [Isoetes flaccida]
 gi|291575360|gb|ADE18073.1| ATP synthase CF1 beta subunit [Isoetes flaccida]
          Length = 493

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D   S+     +  I    P           F+TGI+V+D+  P  
Sbjct: 103 ATLGRIFNVLGEPVDNSGSV-DASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +     +  
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIN 221

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEQHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|91217251|ref|ZP_01254212.1| F0F1 ATP synthase subunit beta [Psychroflexus torquis ATCC 700755]
 gi|91184594|gb|EAS70976.1| F0F1 ATP synthase subunit beta [Psychroflexus torquis ATCC 700755]
          Length = 502

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 158/330 (47%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  G  IDG   L K G   M I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVTGDAIDGLGDLPKTGKDGMSIHREAPKFEDLAVSTEVLFTGIKVIDLIEPYSKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
                            D  G    K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEKGGWDLKKVDKAGMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            S+G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 ESQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  S LD   VL+R +AE G YP VDPL S SR+  +  
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRKIAELGIYPAVDPLDSTSRILTRDI 387

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             D+       +  L+ +++E +DI  I G
Sbjct: 388 LGDDHYDCAQKVKELLQKYKELQDIIAILG 417


>gi|183206490|gb|ACC54443.1| ATP synthase beta subunit [Campanula aucheri]
          Length = 491

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 45  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 104

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 105 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 161

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 162 KIGLFGGAGVGKTVLIMELINNIAKTHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 220

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 221 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 280

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 281 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 338

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 339 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 398

Query: 389 IRLIGG 394
           I  I G
Sbjct: 399 IITILG 404


>gi|1171782|sp|Q08637|NTPB_ENTHR RecName: Full=V-type sodium ATPase subunit B; AltName:
           Full=Na(+)-translocating ATPase subunit B; AltName:
           Full=V-type sodium pump subunit B
 gi|391682|dbj|BAA02970.1| Na+ -ATPase beta subunit [Enterococcus hirae]
 gi|487279|dbj|BAA04276.1| Na+ -ATPase subunit B [Enterococcus hirae]
          Length = 458

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 13/323 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  +V I     G  +    + F     ++  S    GRV + LG+P D   
Sbjct: 42  GQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGHPLQLGVSEDMIGRVFDGLGRPKDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I  +V   + R   ++  +TGI  ID    L  GQ++ VF+GSG+    L
Sbjct: 102 EI-LPEKYLDINGEVINPIARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKEL 160

Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR       SD F  V+ + +G    E   F+ED+     + +SV+ +  +++  I
Sbjct: 161 AAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+I+  +T +A ++REI+    E+P  RGYP  +++
Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            L  L ER G     KG++T +  + +  D+   PI D    I +G I+L R L + G  
Sbjct: 280 NLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQ 339

Query: 349 PPVDPLASVSRLADKAWSADEKK 371
           PP+D L S+SRL DK   A + +
Sbjct: 340 PPIDVLPSLSRLKDKGTGAGKTR 362


>gi|183206668|gb|ACC54532.1| ATP synthase beta subunit [Asyneuma virgatum]
          Length = 488

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGHDLYKEMKES 209

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 210 GVINEQKFVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAQGIYPAVDPLDSTSTMLQPLIVSDEHYKTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|86136463|ref|ZP_01055042.1| ATP synthase subunit B [Roseobacter sp. MED193]
 gi|85827337|gb|EAQ47533.1| ATP synthase subunit B [Roseobacter sp. MED193]
          Length = 474

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + +   +  I    P   ++    +   TGI+VID+  P  
Sbjct: 84  ATLGRILNVIGEPVDEKGPV-EATETRGIHGDAPAFADQSTATEILTTGIKVIDLLAPYT 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE   
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGV 200

Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            + +NL   K  +V    +E P  R    L+ +T+AE F    G +VL  +D+I RF  +
Sbjct: 201 IVPENLVDSKIALVYGQMNEPPGARMRVALSGLTLAEQFRDDSGSDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  S  + G+IT+V +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--SSTKNGSITSVQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            +  + LD   VL+R+++E+G YP VDPL S SRL D     +E   V++ +  ++ R++
Sbjct: 319 ATSFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGEEHYTVATDVQQILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|326502400|dbj|BAJ95263.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528609|dbj|BAJ97326.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 551

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 25/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      KGD+     + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 160 ATLGRIINVIGEPIDH-----KGDIKTNSYLPIHREAPAFVEQATEQQILVTGIKVVDLL 214

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ L+     +         + + VGER RE     RE IE 
Sbjct: 215 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 274

Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
               L D   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF
Sbjct: 275 GVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 334

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 335 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 392

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R ++E G YP VDPL S SR L+      +       +  ++ 
Sbjct: 393 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGQEHYNTARGVQKVLQ 452

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 453 NYKNLQDIIAILG 465


>gi|312882261|ref|ZP_07742007.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370105|gb|EFP97611.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 467

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + S  I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDERGEIG-AEESYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +   
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   +   +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|183206494|gb|ACC54445.1| ATP synthase beta subunit [Campanula pelviformis]
          Length = 497

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G     P      GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLTVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|221132854|ref|XP_002156597.1| PREDICTED: similar to ATP synthase beta subunit [Hydra
           magnipapillata]
          Length = 534

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 160/305 (52%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +        I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 149 GRIMNVIGEPIDERGPI-ITKTKAPIHAEAPAFVEMSVQQEILITGIKVVDLLAPYAKGG 207

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      EF+E     L 
Sbjct: 208 KIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEFMETGVINLK 266

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 267 DKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVS 326

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  +
Sbjct: 327 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTFA 384

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD + VL+R +AE G YP VDPL S SR+ D      +   V+ S+  ++  ++  +DI
Sbjct: 385 HLDANTVLSRGIAELGIYPAVDPLDSNSRILDPNIVGQKHYDVARSVQKILQDYKSLQDI 444

Query: 390 RLIGG 394
             I G
Sbjct: 445 IAILG 449


>gi|209965526|ref|YP_002298441.1| F0F1 ATP synthase subunit beta [Rhodospirillum centenum SW]
 gi|209958992|gb|ACI99628.1| ATP synthase F1, beta subunit [Rhodospirillum centenum SW]
          Length = 484

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 21/312 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G+PID    + K + +  I    P  + +    +   TGI+VID+  P  
Sbjct: 91  ATLGRILNVTGEPIDERGPV-KAEKTYPIHRSAPEFIEQSTEAQILVTGIKVIDLLAPYL 149

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210
            G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   + +     
Sbjct: 150 KGGKIGLFGGAGVGKTVTIQELINNIAKAHGGVSVFAG-VGERTREGNDLYHEMIDSGVI 208

Query: 211 -----GDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
                GD     V +V    +E P  R    L+ +TIAEYF   +G +VL  +D+I RF 
Sbjct: 209 KLNESGDTAGSKVALVYGQMNEPPGARARVGLSGLTIAEYFRDEEGQDVLFFVDNIFRFT 268

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP
Sbjct: 269 QAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTKKGSITSVQAVYVPADDLTDP 326

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VLNR++AE+  +P VDPL S SR  D     +E  K+   +  ++ +
Sbjct: 327 APATSFAHLDATTVLNRAIAEQAIFPAVDPLDSTSRALDPRIVGEEHYKVARDVQKVLQQ 386

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 387 YKSLQDIIAILG 398


>gi|91204911|ref|YP_537266.1| F0F1 ATP synthase subunit beta [Rickettsia bellii RML369-C]
 gi|118573738|sp|Q1RKD7|ATPB_RICBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91068455|gb|ABE04177.1| ATP synthase beta chain [Rickettsia bellii RML369-C]
          Length = 473

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 162/307 (52%), Gaps = 19/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+PIDG   + KG  S+  + K  P+  +Q  ++    TGI+V+D+  P   G
Sbjct: 89  GRIMNVVGEPIDGKGKI-KGS-SISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD---NLK 215
            +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +     NL+
Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLE 206

Query: 216 -----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268
                K  +V    +E P  R    LT +T+AE F   ++G +VL  +D+I RF  +  E
Sbjct: 207 EPEKSKVALVYGQMNEPPGARARVALTGLTVAESFRDMNEGQDVLFFVDNIFRFTQAGSE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP   + 
Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATS 324

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  +  ++  ++  +
Sbjct: 325 FAHLDATTVLSRQIAELGIYPAVDPLDSTSQVLDPMIVGEEHYNVARKVQQILQTYKSLQ 384

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 385 DIIAILG 391


>gi|163792320|ref|ZP_02186297.1| F1-ATP Synthase Beta Chain [alpha proteobacterium BAL199]
 gi|159182025|gb|EDP66534.1| F1-ATP Synthase Beta Chain [alpha proteobacterium BAL199]
          Length = 474

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 157/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G P+D    + +  L   I    P  +++    +   TGI+VID+  P   G
Sbjct: 87  LGRILNVIGDPVDERPPV-ETKLRFPIHRPAPAYIDQSTESEILITGIKVIDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   +   
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMVESGVIVP 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
                K+ +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +  E+
Sbjct: 205 DGPGSKAALVYGQMNEPPGARARVGLTGLTLAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 265 SALLGRMPSAVGYQPTLATDMGALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATSF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D     DE   +   +  ++ ++   +D
Sbjct: 323 AHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYNIARRVQEVLQQYRSLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|327300803|ref|XP_003235094.1| ATP synthase subunit beta [Trichophyton rubrum CBS 118892]
 gi|326462446|gb|EGD87899.1| ATP synthase subunit beta [Trichophyton rubrum CBS 118892]
          Length = 520

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427

Query: 390 RLIGG 394
             I G
Sbjct: 428 IAILG 432


>gi|258690454|gb|ACV87989.1| ATP synthase beta subunit [Aplysina fulva]
          Length = 363

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 19/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    +   +    I  + P  +     ++  +TGI+V+D+  P   G
Sbjct: 31  LGRIINVIGEPIDERGPVNAKE-HFGIHQEAPEFVEMSVEQEILETGIKVVDLLAPYAKG 89

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE    D 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIDL 148

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            G   K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 149 KGKGSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSE 207

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   + 
Sbjct: 208 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATT 265

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R +AE G YP VDPL S SR+ D      E   +   +  ++  ++  +
Sbjct: 266 FAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGHEHYNIARGVQKILQDYKSLQ 325

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 326 DIIAILG 332


>gi|28899843|ref|NP_799448.1| F0F1 ATP synthase subunit beta [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260361991|ref|ZP_05774996.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus K5030]
 gi|260876522|ref|ZP_05888877.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AN-5034]
 gi|260897421|ref|ZP_05905917.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus Peru-466]
 gi|260901306|ref|ZP_05909701.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ4037]
 gi|81839718|sp|Q87KA8|ATPB_VIBPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28808095|dbj|BAC61332.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087912|gb|EFO37607.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus Peru-466]
 gi|308090432|gb|EFO40127.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AN-5034]
 gi|308109863|gb|EFO47403.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ4037]
 gi|308114172|gb|EFO51712.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus K5030]
 gi|328471195|gb|EGF42097.1| F0F1 ATP synthase subunit beta [Vibrio parahaemolyticus 10329]
          Length = 467

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  ++    + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +  
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 203

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR  D      D   +   +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDIARGVQQTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|315048499|ref|XP_003173624.1| ATP synthase subunit beta [Arthroderma gypseum CBS 118893]
 gi|311341591|gb|EFR00794.1| ATP synthase subunit beta [Arthroderma gypseum CBS 118893]
          Length = 520

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427

Query: 390 RLIGG 394
             I G
Sbjct: 428 IAILG 432


>gi|284999813|dbj|BAI67807.1| ATP synthase beta-subunit [Chloromonas augustae]
          Length = 376

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 160/313 (51%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 29  ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AE+F      +VL  +D+I RF 
Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEFFRDFNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
                 + LD   VL+R+LA +G YP VDPL S S +  + W   EK   +   +   + 
Sbjct: 262 APAVTFTHLDATTVLSRNLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E  DI  I G
Sbjct: 321 RYKELTDIIAILG 333


>gi|302880125|ref|YP_003848689.1| ATP synthase F1, beta subunit [Gallionella capsiferriformans ES-2]
 gi|302582914|gb|ADL56925.1| ATP synthase F1, beta subunit [Gallionella capsiferriformans ES-2]
          Length = 465

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 155/306 (50%), Gaps = 18/306 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           A   GR+++ LG+PID       G++  E    I  K P            +TGI+VID+
Sbjct: 87  AGTLGRIMDVLGRPIDD-----AGEIPCEERRPIHQKAPKFDELSPSVDLLETGIKVIDL 141

Query: 155 FTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
             P   G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +  
Sbjct: 142 VCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMK 200

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
             N L K  +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E+
Sbjct: 201 DSNVLDKVSMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEV 260

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++  E+ RL ERI  +  + G+IT+V +V V  D+  DP   +  
Sbjct: 261 SALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSVQAVYVPADDLTDPAPATTF 318

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
             LD  +VL+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RD
Sbjct: 319 LHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPLVVGEEHYSVARRVQQNLQRYKELRD 378

Query: 389 IRLIGG 394
           I  I G
Sbjct: 379 IIAILG 384


>gi|21956144|dbj|BAC06432.1| ATP synthase beta-subunit [Gonium viridistellatum]
          Length = 376

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|124806537|ref|XP_001350751.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Plasmodium falciparum 3D7]
 gi|23496878|gb|AAN36431.1|AE014849_50 ATP synthase beta chain, mitochondrial precursor, putative
           [Plasmodium falciparum 3D7]
          Length = 535

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 29/315 (9%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLCH 160
           GR++N +G+PID    +  K  L +    + PP    Q  E     TGI+V+D+  P   
Sbjct: 141 GRIMNVIGEPIDECGHINHKKTLPIH---RDPPLFTDQSTEPALLITGIKVVDLIAPYAK 197

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYL------ 210
           G +IG+F G+G+GK T+L M   ++   K     + + VGER RE  +   + +      
Sbjct: 198 GGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMITTGVIK 256

Query: 211 ----GDNL-----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
               G+N       K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+I 
Sbjct: 257 KKKIGNNEFDFNGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFIDNIY 316

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 317 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADDL 374

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379
            DP   +  S LD   VL+RS+AE G YP VDPL S SR L      A++ ++  ++  +
Sbjct: 375 TDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGAEQYQVARNVQQI 434

Query: 380 IHRFEETRDIRLIGG 394
           +  ++  +DI  I G
Sbjct: 435 LQDYKSLQDIIAILG 449


>gi|297570967|ref|YP_003696741.1| ATP synthase F1 subunit beta [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931314|gb|ADH92122.1| ATP synthase F1, beta subunit [Arcanobacterium haemolyticum DSM
           20595]
          Length = 486

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 19/299 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++    LG+G+ ++++  + P     P  +    E K F+TGI+VID+ T
Sbjct: 104 GHVFNVTGDVLN----LGEGE-TLDVKERWPIHRKAPQFDELEPETKMFETGIKVIDLLT 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I +     
Sbjct: 159 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIHEMEDAG 218

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            L K+ +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 219 VLDKTALVFGQMDEPPGVRLRIALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 278

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 279 LLGRMPSAVGYQPTLADEMGALQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAH 336

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           LD    L+R +A  G YP VDPL S SR+ D  +         + +  ++ + +E +DI
Sbjct: 337 LDATTELSRDIASRGLYPAVDPLTSTSRILDAQYVGQAHYDTATKVKSILQKNKELQDI 395


>gi|148652009|ref|YP_001279102.1| F0F1 ATP synthase subunit beta [Psychrobacter sp. PRwf-1]
 gi|172048450|sp|A5WBW1|ATPB_PSYWF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148571093|gb|ABQ93152.1| ATP synthase F1, beta subunit [Psychrobacter sp. PRwf-1]
          Length = 475

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 27/316 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   D    I  + P    +       +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGRPIDEQGPVNSED-KWSIHRQAPSYDEQANSTDLLETGIKVIDLLCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205
            G ++G+F G+G+GK+  +     +       +S+   VGER RE  +F           
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVD 199

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSI 259
           +E++      K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I
Sbjct: 200 VENFTN---SKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGKDVLLFVDNI 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+
Sbjct: 257 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSIQAVYVPADD 314

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD  +VL+R +A +G YP +DPL S SR  D     +E   V+  +  
Sbjct: 315 LTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVIGEEHYNVARGVQE 374

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R++E +DI  I G
Sbjct: 375 VLQRYKELKDIIAILG 390


>gi|218147|dbj|BAA01372.1| mitochondrial F1-ATPase beta subunit [Oryza sativa Japonica Group]
          Length = 551

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+PID      KGD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 159 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLV 213

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 214 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 272

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+A +F  ++G +VLL +D+I R
Sbjct: 273 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAVHFRDAEGQDVLLFIDNIFR 332

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 333 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 390

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 391 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQRVL 450

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 451 QNYKNLQDIIAILG 464


>gi|165933793|ref|YP_001650582.1| F0F1 ATP synthase subunit beta [Rickettsia rickettsii str. Iowa]
 gi|165908880|gb|ABY73176.1| ATP synthase beta chain [Rickettsia rickettsii str. Iowa]
          Length = 499

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 19/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVI 152
           RI       GR++N +G+PIDG   +   ++S   + K  P    Q  E+    TGI+VI
Sbjct: 106 RIPVGTETLGRIMNVVGEPIDGKGDIKSSNISS--IYKPAPDFTNQSTERNILVTGIKVI 163

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + 
Sbjct: 164 DLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 223

Query: 210 LGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259
           +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +D+I
Sbjct: 224 IDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNI 283

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+
Sbjct: 284 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADD 341

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  +  
Sbjct: 342 LTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQ 401

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 402 VLQTYKSLQDIITILG 417


>gi|172037726|ref|YP_001804227.1| F0F1 ATP synthase subunit beta [Cyanothece sp. ATCC 51142]
 gi|171699180|gb|ACB52161.1| ATP synthase F1, beta subunit [Cyanothece sp. ATCC 51142]
          Length = 483

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 163/323 (50%), Gaps = 16/323 (4%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D+V       +       GR+ N LG+P+D    +G  + S  I    P         K 
Sbjct: 80  DIVDTGAPISVPVGKATLGRIFNVLGEPVDEMGDVGNEE-SSPIHRPAPKLTELSTKPKV 138

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE 201
           F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +S+ G   ER RE
Sbjct: 139 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 198

Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
                 E IE  +   DNL +S   +V    +E P  R    L+A+T+AEYF      +V
Sbjct: 199 GNDLYNEMIESKVINPDNLSESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDV 258

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +
Sbjct: 259 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 316

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LDG  VL+R+LA +G YP VDPL S S +        E   
Sbjct: 317 VYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPNIVGQEHYD 376

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
              ++   + R++E +DI  I G
Sbjct: 377 TARAVQSTLQRYKELQDIIAILG 399


>gi|4519314|dbj|BAA75572.1| ATP synthase beta-subunit [Gonium quadratum]
          Length = 376

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVER 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 QLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|183206552|gb|ACC54474.1| ATP synthase beta subunit [Campanula medium]
          Length = 471

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 92  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 207

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 385

Query: 389 IRLIGG 394
           I  I G
Sbjct: 386 IITILG 391


>gi|297192040|ref|ZP_06909438.1| F0F1 ATP synthase subunit beta [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719510|gb|EDY63418.1| F0F1 ATP synthase subunit beta [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 480

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 15/327 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  +          I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNVPEENANIGERWPIHRKAPNFDQLESKTEMFETGVKVIDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + IE+      + K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMSESGVIDKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I R+  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRYTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R ++E+G YP VDPL S SR+ D  +   E     + +  ++ ++++ +DI  I    
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYITQEHYDAATRVKGILQKYKDLQDIIAI---- 394

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    VH+   +  FL Q+
Sbjct: 395 LGIDELGEEDKLVVHRARRVERFLSQN 421


>gi|183206602|gb|ACC54499.1| ATP synthase beta subunit [Prismatocarpus schlechteri]
          Length = 480

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 201

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|183206576|gb|ACC54486.1| ATP synthase beta subunit [Campanula rumeliana]
          Length = 475

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 92  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 207

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 385

Query: 389 IRLIGG 394
           I  I G
Sbjct: 386 IITILG 391


>gi|226370|prf||1508208A ATPase beta
          Length = 499

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 169/354 (47%), Gaps = 41/354 (11%)

Query: 79  EEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G+    P+     GR+ N  G PIDG  ++ K +    I +K P   N
Sbjct: 62  EGLVRGMAVIDTGKGTTMPTGEAIKGRLFNVTGDPIDGLPAVSK-EGGRAIHAKPPAFEN 120

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISL 194
                +   TGI+VID+  P   G +IG+F G+G+GK+ L+       +  +  + + + 
Sbjct: 121 LSTASEVLYTGIKVIDLIEPYAKGGKIGLFGGAGVGKTVLIQELINNIAKAYSGLSVFAG 180

Query: 195 VGERGRE----VREFIEDYL---GDNLK---------------------KSVVVVATSDE 226
           VGER RE    +RE IE  +   G+  K                     K+  V    +E
Sbjct: 181 VGERTREGNDLMREMIEAGIMKYGEGFKHSMEEGGWDLSKVDMNELADSKATFVFGQMNE 240

Query: 227 SPILRKMAPLTAVTIAEYF-----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
            P  R    L+ +TIAEY+       KG ++L  +D+I RF  +  E++   G +P A G
Sbjct: 241 PPGARARVALSGLTIAEYYRDGDGQGKGRDILFFVDNIFRFTQAGSEVSALLGRMPSAVG 300

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ +E+  + ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+R 
Sbjct: 301 YQPTLATEMGLMQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRK 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +A+ G YP VDPL S SR+       D    L + +  ++ R++E +DI  I G
Sbjct: 359 IADLGIYPAVDPLDSTSRILSPQVVGDAHYNLANRVKVMLQRYKELQDIIAILG 412


>gi|183206556|gb|ACC54476.1| ATP synthase beta subunit [Campanula bononiensis]
          Length = 479

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 31  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 91  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 147

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 206

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 207 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 266

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 267 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 324

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 325 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 384

Query: 389 IRLIGG 394
           I  I G
Sbjct: 385 IITILG 390


>gi|116328613|ref|YP_798333.1| F0F1 ATP synthase subunit beta [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331342|ref|YP_801060.1| F0F1 ATP synthase subunit beta [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280912|sp|Q04S18|ATPB_LEPBJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122283600|sp|Q04ZU5|ATPB_LEPBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116121357|gb|ABJ79400.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116125031|gb|ABJ76302.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
          Length = 467

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 162/304 (53%), Gaps = 15/304 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LGK ID   ++   + +  I    P         + F+TGI+VID+  P  
Sbjct: 87  ATLGRIFNVLGKTIDEGPAITVKE-TRPIHRPAPAFDELTSKTEVFETGIKVIDLLAPYI 145

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212
            G + G+F G+G+GK+ L+     +         + + VGER RE     RE  E  + D
Sbjct: 146 KGGKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFAGVGERTREGNDLWREMKESGVID 205

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K+V+     +E P  R    L+A+T+AE+F  S G +VLL +D+I RF+ +  E++ 
Sbjct: 206 ---KTVLCYGQMNEPPGARLRVALSALTMAEHFRDSIGTDVLLFVDNIFRFSQAGSEVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 263 LLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPANAFAH 320

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD   VL+R+++++G YP VDPL S SR+ +     +E   V+  +  ++ R+++ +DI 
Sbjct: 321 LDATTVLSRAISDKGIYPAVDPLDSTSRVMNAQVLGEEHYTVAREVQRILQRYKDLQDII 380

Query: 391 LIGG 394
            I G
Sbjct: 381 AILG 384


>gi|254432370|ref|ZP_05046073.1| ATP synthase F1, beta subunit [Cyanobium sp. PCC 7001]
 gi|197626823|gb|EDY39382.1| ATP synthase F1, beta subunit [Cyanobium sp. PCC 7001]
          Length = 486

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   +L+  I    P     +   + F+TGI+VID+  P  
Sbjct: 95  ATLGRIFNVLGEPVDEQGPVST-NLTAPIHRAAPKLTELETKPRVFETGIKVIDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 154 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 213

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 214 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|139439333|ref|ZP_01772775.1| Hypothetical protein COLAER_01791 [Collinsella aerofaciens ATCC
           25986]
 gi|133775357|gb|EBA39177.1| Hypothetical protein COLAER_01791 [Collinsella aerofaciens ATCC
           25986]
          Length = 484

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 168/327 (51%), Gaps = 15/327 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +GKP+DG   + + +    I    P         + F+TGI+ +D+  P   G
Sbjct: 106 LGRIWNVMGKPVDGK-PMPEVEEFYPIHHAAPRFDELTTKTEIFETGIKAVDLLEPYIRG 164

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            + G+F G+G+GK+ L+     +   +     + + VGER RE  + F+E      + K+
Sbjct: 165 GKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLFLEMSESGVIDKT 224

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF+ +  E++   G +P
Sbjct: 225 CLVYGQMNEPPGARLRIGLAGLTTAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGRMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 285 SAVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYR 396
           L+RS++  G +P +DPLAS S   D +   +E   V+  +  L+  + + +DI  I    
Sbjct: 343 LSRSISSLGLFPAIDPLASSSDALDPSIVGEEHYRVAVKVQELLQEYSDLQDIIAI---- 398

Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420
            G+D + ++    V++   I  FL QS
Sbjct: 399 LGMDELSEEQRLTVNRARKIQQFLSQS 425


>gi|91178108|gb|ABE27289.1| mitochondrial F-ATPase beta subunit [Candida famata]
          Length = 337

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 22/308 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR++N +G+PID    +   +     + + PPA   Q  + +  +TGI+V+D+  P   
Sbjct: 19  LGRILNVIGEPIDEQGPVDAKE--TRPIHQDPPAFVDQSTKAEVLETGIKVVDLLAPYAR 76

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----D 208
           G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E    +
Sbjct: 77  GGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVIN 135

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
             GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  
Sbjct: 136 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGS 193

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   KG++T+V +V V  D+  DP   +
Sbjct: 194 EVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTTKGSVTSVQAVYVPADDLTDPAPAT 251

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R ++E G YP VDPL S SRL D      E  ++ + +   +  ++  
Sbjct: 252 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDADIVGKEHYEVATGVQQTLQAYKSL 311

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 312 QDIIAILG 319


>gi|255326276|ref|ZP_05367362.1| ATP synthase F1, beta subunit [Rothia mucilaginosa ATCC 25296]
 gi|255296730|gb|EET76061.1| ATP synthase F1, beta subunit [Rothia mucilaginosa ATCC 25296]
          Length = 487

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 7/272 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG  +D  +S  K D    I    P     +   +  +TGI+ ID+ TP   G 
Sbjct: 104 GHIFNVLGDALDVPNSEIKADTYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 163

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 164 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 223

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 224 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 283

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 284 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 341

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           L+R +A  G YP +DPL+S SR+ D  +   E
Sbjct: 342 LSREIASRGLYPAIDPLSSTSRILDAQYIGQE 373


>gi|183206686|gb|ACC54541.1| ATP synthase beta subunit [Campanula jacquinii]
          Length = 498

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|110636759|ref|YP_676966.1| F0F1 ATP synthase subunit beta [Cytophaga hutchinsonii ATCC 33406]
 gi|123059035|sp|Q11Y90|ATPB_CYTH3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110279440|gb|ABG57626.1| ATP synthase F1 subcomplex beta subunit [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 501

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 173/357 (48%), Gaps = 47/357 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G  IDG  S G     M I  + P   +     +   TGI+VID+  P   G 
Sbjct: 89  GRLYNVVGDAIDGIPS-GVAANRMSIHRQAPKFEDLSTNTEVLFTGIKVIDLLEPYVKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE IE  +   GD
Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAYAGLSVFAGVGERTREGNDLLREMIESNVIRYGD 207

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246
             K S+                     +V    +E P  R    L  +T+AEYF      
Sbjct: 208 EFKHSMEKGEWDLSKVDATELLKSQATLVFGQMNEPPGARARVALAGLTVAEYFRDGDGQ 267

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G+
Sbjct: 268 GQGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRGS 325

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           IT+V +V V  D+  DP   +  + LD   VLNR ++E G YP VDPL S SR L+ +  
Sbjct: 326 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLNRKISELGIYPAVDPLDSTSRILSPEIL 385

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
            ++       +  ++ R++E +DI  I     G+D + +   +AVH+   +  FL Q
Sbjct: 386 GSEHYDCAQRVKEILQRYKELQDIIAI----LGMDELSEEDKQAVHRARRVQRFLSQ 438


>gi|218767495|ref|YP_002342007.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis Z2491]
 gi|81857515|sp|Q9JW70|ATPB_NEIMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|121051503|emb|CAM07796.1| ATP synthase beta chain [Neisseria meningitidis Z2491]
          Length = 465

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 16/304 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG P+D    +   D S  I    P         +  +TGI+VID+  P   G 
Sbjct: 84  GRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGG 142

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +    N L K 
Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIAT 271
            +V    +E P  R    LT +T+AEYF      + KG +VL  +D+I R+  +  E++ 
Sbjct: 202 AMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSA 261

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + 
Sbjct: 262 LLGRMPSAVGYQPTLAEEMGCLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAH 319

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +   + +++E RDI 
Sbjct: 320 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDII 379

Query: 391 LIGG 394
            I G
Sbjct: 380 AILG 383


>gi|257095876|ref|YP_003169517.1| ATP synthase F1 subunit beta [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048400|gb|ACV37588.1| ATP synthase F1, beta subunit [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 466

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+PID    +   +   EI    P            +TGI+VID+  P   G 
Sbjct: 92  GRIMNVLGRPIDEAGPIATEE-RREIHQLAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKESNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F   G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+    + + +++E RDI  I G
Sbjct: 328 LSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYGVARAVQMTLQKYKELRDIIAILG 385


>gi|183206550|gb|ACC54473.1| ATP synthase beta subunit [Campanula latifolia]
          Length = 475

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 37  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 96

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 97  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 153

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 212

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 213 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 273 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 331 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 390

Query: 389 IRLIGG 394
           I  I G
Sbjct: 391 IITILG 396


>gi|115401284|ref|XP_001216230.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114190171|gb|EAU31871.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 500

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 16/304 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PID    + K    + I ++ PP   +    +   TGI+V+D+  P   G 
Sbjct: 128 GRILNVTGDPIDERGPV-KATTYLPIHTEAPPFTEQSTEAEILVTGIKVVDLLAPYARGG 186

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         D
Sbjct: 187 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFCG-VGERTREGNDLYHEMQETGVIQLD 245

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 246 GESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSA 305

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  + 
Sbjct: 306 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAH 363

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E G YP VDPL S SR+ D      E     + +  ++  ++  +DI 
Sbjct: 364 LDATTVLSRGISELGIYPAVDPLDSKSRMLDARIVGQEHYDTATRVQQMLQEYKSLQDII 423

Query: 391 LIGG 394
            I G
Sbjct: 424 AILG 427


>gi|300770997|ref|ZP_07080874.1| ATP synthase F1 sector beta subunit [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762270|gb|EFK59089.1| ATP synthase F1 sector beta subunit [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 500

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 171/358 (47%), Gaps = 49/358 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N +G  IDG  +L K   +   +  VPP       E     TGI+VID+  P   G
Sbjct: 89  GRVFNVVGDAIDGIKNLDK--TNGRPIHNVPPKFEDLSTESEVLFTGIKVIDLLEPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 206

Query: 208 DYLGDNLKKS-----------------VVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+  + ++K                    V    +E P  R    L+ +T+AEYF     
Sbjct: 207 DHFMEGMEKGEWPLETVDQELMKESKCTFVFGQMNEPPGARARVALSGLTVAEYFRDGEG 266

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G
Sbjct: 267 DGQGKDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKNG 324

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+   A 
Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSPAV 384

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
             DE       +  ++ R++E +DI  I     G+D + +   + VH+   +  FL Q
Sbjct: 385 LGDEHYNTAQRVKEILQRYKELQDIIAI----LGMDELSEEDKQTVHRARRVQRFLSQ 438


>gi|183206590|gb|ACC54493.1| ATP synthase beta subunit [Campanula erinus]
          Length = 498

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|217965808|ref|YP_002351486.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23]
 gi|217335078|gb|ACK40872.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23]
 gi|307569648|emb|CAR82827.1| ATP synthase F1, beta subunit [Listeria monocytogenes L99]
          Length = 456

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYETHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG     +  +   I  + P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F  V     GER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K VH+   I +FL Q    S     +E +F EI
Sbjct: 381 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423


>gi|190358738|sp|Q0RDB4|ATPB_FRAAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 479

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V N LG P+D D      +    I  + P     +   + F TGI+VID+  P   G 
Sbjct: 105 GHVFNVLGTPLDVDKV--DAETRWSIHRQAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 162

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ ++    R  +  F  V + + VGER RE  + F+E      ++ + 
Sbjct: 163 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQTV 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+++ G YP V PL S SR+ D  +   E       +  ++ R+++ +DI  I G
Sbjct: 341 LDRSISDLGIYPAVSPLDSNSRILDARYLGQEHYDTAREVQRILQRYKDLQDIIAILG 398


>gi|118573739|sp|Q4UK18|ATPB_RICFE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 474

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 80  RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKSAPDFTNQSTERNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVIDLEKPENSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKNGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQILQTYKSLQDIIAILG 391


>gi|298674215|ref|YP_003725965.1| ATP synthase subunit B [Methanohalobium evestigatum Z-7303]
 gi|298287203|gb|ADI73169.1| ATP synthase, B subunit [Methanohalobium evestigatum Z-7303]
          Length = 475

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 193/391 (49%), Gaps = 38/391 (9%)

Query: 29  ITSVYYTVTCLS---------QYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPV-GI 77
           +T  Y T+T +S         + V  G+ V ++    S   GQV+  + D V +    G 
Sbjct: 1   MTKEYKTITQISGPLIFLEKTEPVGYGELVQINTEDGSTKRGQVLDTSGDTVVVQVFEGT 60

Query: 78  GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSK 131
           G       +VF     ++  S    GR+++  G+P+D       D  L     +M   S+
Sbjct: 61  GGLNDSAGVVFTGETIKLPVSKDMLGRILSGSGEPLDEGPHIVPDKRLDINGAAMNPYSR 120

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SD 185
            PP       E+  +TGI  ID    L  GQ++ +F+GSG+  + +    AR      S+
Sbjct: 121 RPP-------EEFIQTGISTIDGTNTLVRGQKLPIFSGSGLPHNEIALQIARQSTVLGSE 173

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
               V+ + +G    E + F++D+     L+++VV +  +D+  + R + P  A+T AEY
Sbjct: 174 EEFAVVFAAMGITHEESQTFMDDFEKTGALERAVVFLNHADDPAVERMITPRMALTAAEY 233

Query: 245 FSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            + + D +VL+IL  +T +A ++R++     E+P  +GYP  ++++L  L ER G  +  
Sbjct: 234 LAYEHDMHVLVILTDMTNYAEALRQMGAAREEVPGRQGYPGYMYTDLASLYERAGVIKGR 293

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-- 361
           KG++T +  + + GD+   PI D    I +G IV++R L  +G YPP++ L S+SRL   
Sbjct: 294 KGSVTQIPILTMPGDDITHPIPDLSGYITEGQIVVSRELHRKGIYPPINVLPSLSRLMGS 353

Query: 362 --DKAWSADEKKLVSSLTHLIHRFEETRDIR 390
              +  + D+ K VS    L   + E RD+R
Sbjct: 354 GIGEGKTRDDHKKVSD--QLYAGYAEGRDLR 382


>gi|183206488|gb|ACC54442.1| ATP synthase beta subunit [Campanula bellidifolia]
          Length = 494

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 46  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 105

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 106 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 162

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 163 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 221

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 222 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 281

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 282 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 339

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 340 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 399

Query: 389 IRLIGG 394
           I  I G
Sbjct: 400 IITILG 405


>gi|213401044|gb|ACJ47170.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Dirofilaria
           immitis]
          Length = 312

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 20/289 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160
            GRV N +G  IDG   L KG+ ++E + +VPP+   Q++ E+   TGI+VID+  P   
Sbjct: 20  LGRVFNVVGDLIDGYGLL-KGEYNLEPIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLK 78

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLGDNL- 214
           G +IG+F G+G+GK+ L+     +    K+     + + VGER RE  +   + +  N+ 
Sbjct: 79  GGKIGLFGGAGVGKTVLIMELVNN--IAKIHKGFSVFAGVGERIREGNDLYHEMINSNVI 136

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266
                   K+V+V    +E P  R    LTA+T+AEYF  +   +VL  +D+I RF  + 
Sbjct: 137 NINEHEKSKAVLVYGQMNEPPGARARVVLTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 196

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++T  G +P A GY  ++ +++  + ERI  +    G+IT+V ++ V  D+  DP   
Sbjct: 197 SEVSTLLGRIPSAVGYQPTLATDMGVMQERI--TSTTSGSITSVQAIYVPADDLTDPAPA 254

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +  S LD   VL+R +AE G YP VDPL S S+        +E   V+S
Sbjct: 255 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSSEVIGEEHYRVAS 303


>gi|290892330|ref|ZP_06555325.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-071]
 gi|290558156|gb|EFD91675.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-071]
          Length = 456

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYETHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG     +  +   I  + P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F  V     GER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K VH+   I +FL Q    S     +E +F EI
Sbjct: 381 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423


>gi|4519318|dbj|BAA75574.1| ATP synthase beta-subunit [Gonium viridistellatum]
 gi|21956010|dbj|BAC06375.1| ATP synthase beta-subunit [Gonium viridistellatum]
          Length = 376

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|332671302|ref|YP_004454310.1| ATP synthase F1 subunit beta [Cellulomonas fimi ATCC 484]
 gi|332340340|gb|AEE46923.1| ATP synthase F1, beta subunit [Cellulomonas fimi ATCC 484]
          Length = 493

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 161/304 (52%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNR-QRVEKGFKTGIRVIDIFT 156
           G+V N +G+ ++       G+  +EI  + P     PA ++ +     F+TGI+VID+ T
Sbjct: 110 GKVFNVIGEVLNA----APGE-KIEITERWPIHRKAPAFDQLESKTTMFETGIKVIDLLT 164

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    +   +S+   VGER RE  + I E     
Sbjct: 165 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMEEAG 224

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF      +VLL +D+I RF  +  E++T
Sbjct: 225 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVAKQDVLLFIDNIFRFTQAGSEVST 284

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 285 LLGRMPSAVGYQPNLADEMGLLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAH 342

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPLAS SR+ D  +   E   V++ +  ++ R +E +DI 
Sbjct: 343 LDATTELSREIASRGLYPAVDPLASTSRILDPRYVGQEHYDVATRVKSILQRNKELQDII 402

Query: 391 LIGG 394
            I G
Sbjct: 403 AILG 406


>gi|183206586|gb|ACC54491.1| ATP synthase beta subunit [Campanula pinatzii]
          Length = 498

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|153839883|ref|ZP_01992550.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ3810]
 gi|149746591|gb|EDM57579.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ3810]
          Length = 448

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  ++    + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 67  GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 124

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +  
Sbjct: 125 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 184

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 185 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 244

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  +
Sbjct: 245 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR  D      D   +   +   + R++E +DI
Sbjct: 303 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDIARGVQQTLQRYKELKDI 362

Query: 390 RLIGG 394
             I G
Sbjct: 363 IAILG 367


>gi|296809027|ref|XP_002844852.1| ATP synthase beta chain [Arthroderma otae CBS 113480]
 gi|238844335|gb|EEQ33997.1| ATP synthase beta chain [Arthroderma otae CBS 113480]
          Length = 520

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427

Query: 390 RLIGG 394
             I G
Sbjct: 428 IAILG 432


>gi|187930577|ref|YP_001901064.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12J]
 gi|187727467|gb|ACD28632.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12J]
          Length = 469

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 94  GRIMDVLGRPIDEAGPIA-CDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 152

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 212 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 271

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E  ++   +   + R++E RDI  I G
Sbjct: 330 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILG 387


>gi|67459658|ref|YP_247282.1| F0F1 ATP synthase subunit beta [Rickettsia felis URRWXCal2]
 gi|67005191|gb|AAY62117.1| ATP synthase beta chain [Rickettsia felis URRWXCal2]
          Length = 508

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 114 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKSAPDFTNQSTERNILVTGI 168

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 169 KVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 228

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 229 HEMIDSGVIDLEKPENSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 288

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 289 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKNGSITSVQAIYVP 346

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 347 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 406

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 407 VQQILQTYKSLQDIIAILG 425


>gi|16802140|ref|NP_463625.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes EGD-e]
 gi|224498206|ref|ZP_03666555.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes Finland
           1988]
 gi|224502984|ref|ZP_03671291.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL R2-561]
 gi|254832384|ref|ZP_05237039.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 10403S]
 gi|255028512|ref|ZP_05300463.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes LO28]
 gi|81593022|sp|Q8YAM6|ATPB1_LISMO RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|16409451|emb|CAC98307.1| lmo0092 [Listeria monocytogenes EGD-e]
          Length = 456

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYHTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG       ++   I    P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPEPA-AEVKWPIFRAQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F  V     GER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNSVFTGV-----GERVREGIGLYKELEASGVLP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K VH+   I +FL Q    S     +E  F EI
Sbjct: 381 GMAELSDED-RKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEI 423


>gi|283458316|ref|YP_003362935.1| F0F1-type ATP synthase subunit beta [Rothia mucilaginosa DY-18]
 gi|283134350|dbj|BAI65115.1| F0F1-type ATP synthase, beta subunit [Rothia mucilaginosa DY-18]
          Length = 490

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 7/272 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG  +D  +S  K D    I    P     +   +  +TGI+ ID+ TP   G 
Sbjct: 107 GHIFNVLGDALDVPNSEIKADTYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 166

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 167 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 226

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 227 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 286

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 287 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 344

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           L+R +A  G YP +DPL+S SR+ D  +   E
Sbjct: 345 LSREIASRGLYPAIDPLSSTSRILDAQYIGQE 376


>gi|183206486|gb|ACC54441.1| ATP synthase beta subunit [Michauxia tchihatchewii]
          Length = 482

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 37  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 96

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 97  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 153

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 212

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 213 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 272

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 273 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 330

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 331 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 390

Query: 389 IRLIGG 394
           I  I G
Sbjct: 391 IITILG 396


>gi|149202397|ref|ZP_01879370.1| F0F1 ATP synthase subunit beta [Roseovarius sp. TM1035]
 gi|149144495|gb|EDM32526.1| F0F1 ATP synthase subunit beta [Roseovarius sp. TM1035]
          Length = 474

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + K      I    P    +    +   TGI+V+D+  P  
Sbjct: 84  ATLGRILNVIGEPVDEGAPI-KATEYRSIHQPAPEFSEQSTASEILVTGIKVVDLLAPYA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGSDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKQGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R+++E G YP VDPL S SRL D     +E   V+  +  ++ R++
Sbjct: 319 ATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRLMDPQIVGEEHYQVARDVQGILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|85704182|ref|ZP_01035285.1| ATP synthase subunit B [Roseovarius sp. 217]
 gi|85671502|gb|EAQ26360.1| ATP synthase subunit B [Roseovarius sp. 217]
          Length = 474

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + K      I    P    +    +   TGI+V+D+  P  
Sbjct: 84  ATLGRILNVIGEPVDEGAPI-KATEYRSIHQPAPEFSEQSTASEILVTGIKVVDLLAPYA 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGSDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKQGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R+++E G YP VDPL S SRL D     +E   V+  +  ++ R++
Sbjct: 319 ATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRLMDPQIVGEEHYQVARDVQGILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|255533299|ref|YP_003093671.1| ATP synthase F1 subunit beta [Pedobacter heparinus DSM 2366]
 gi|255346283|gb|ACU05609.1| ATP synthase F1, beta subunit [Pedobacter heparinus DSM 2366]
          Length = 500

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 42/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GR+ N +G+ IDG +++ K       +   PP       E +   TGI+VID+  P   G
Sbjct: 89  GRLFNVVGEAIDGINAVDK--TGGRPIHNTPPRFEDLSTETEVLFTGIKVIDLLEPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +REFIE       
Sbjct: 147 GKIGLFGGAGVGKTVLIMELVNNIAKAYAGLSVFAGVGERTREGNDLLREFIESGVINYG 206

Query: 208 -DYL--------------GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
            ++L               D LK  K+ +V    +E P  R    L+ +T+AEYF     
Sbjct: 207 DEFLHSMEKGGWDLKTVDTDKLKESKATLVFGQMNEPPGARARVALSGLTVAEYFRDGDG 266

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 267 EGAGKDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKRG 324

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+   A 
Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSPAI 384

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +   + R++E +DI  I G
Sbjct: 385 LGDEHYNTAQRVKETLQRYKELQDIIAILG 414


>gi|303273232|ref|XP_003055977.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
 gi|226462061|gb|EEH59353.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
          Length = 534

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +     S+ I  + PP +++    +   TGI+V+D+  P  
Sbjct: 143 ATLGRIMNVIGEPIDECGPIETAS-SLAIHREAPPFVDQSTEMEMLVTGIKVVDLLAPYQ 201

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNL 214
            G +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + + G  +
Sbjct: 202 KGGKIGLFGGAGVGKTVFIMELINNIAKGHGGFSVFAG-VGERTREGNDLYHEMIEGGVI 260

Query: 215 K--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           K        K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 261 KLGAQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLLFVDNIFRFTQA 320

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V ++ V  D+  DP  
Sbjct: 321 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTMKGSITSVQAIYVPADDLTDPAP 378

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S SR+       DE    +  +  ++  ++
Sbjct: 379 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRMLSPLALGDEHYATARGVQKVLQDYK 438

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 439 NLQDIIAILG 448


>gi|183206554|gb|ACC54475.1| ATP synthase beta subunit [Edraianthus graminifolius]
          Length = 473

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 85  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 141

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 142 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 200

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 201 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 260

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 261 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 318

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 319 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 378

Query: 389 IRLIGG 394
           I  I G
Sbjct: 379 IITILG 384


>gi|149190474|ref|ZP_01868745.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
 gi|148835728|gb|EDL52694.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
          Length = 467

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + S  I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGEIG-AEESYAIHREAPSYEEQSNEVALLETGVKVIDLVCPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLKK 216
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    N++K
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEK 204

Query: 217 S-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
                  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR+ D      E  ++   +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYEVARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|301308760|ref|ZP_07214712.1| ATP synthase F1, beta subunit [Bacteroides sp. 20_3]
 gi|300833284|gb|EFK63902.1| ATP synthase F1, beta subunit [Bacteroides sp. 20_3]
          Length = 505

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PIDG   L K D ++ I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 94  GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +++ F   + + VGER RE    +RE I+  +   
Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     +V    +E P  R    L+ +TIAE F  K 
Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +K
Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
               E       +  ++ R +E +DI
Sbjct: 389 IVGKEHYDTAQQVKQILQRNKELQDI 414


>gi|84683667|ref|ZP_01011570.1| ATP synthase subunit B [Maritimibacter alkaliphilus HTCC2654]
 gi|84668410|gb|EAQ14877.1| ATP synthase subunit B [Rhodobacterales bacterium HTCC2654]
          Length = 474

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N  G P+D    + + D    I +  P    +    +   TGI+VID+  P  
Sbjct: 84  ATLGRILNVTGDPVDEKGPI-EADEYRPIHADAPDFDEQATEAEILVTGIKVIDLLAPYS 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE   
Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGLSVFAGVGERTREGNDLYHEMIESGV 200

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
              DNL  S   +V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 LTPDNLPDSKIALVYGQMNEPPGARARIALTGLTLAEQFRDATGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 261 GSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VLNR+++E G YP VDPL S SRL D     DE  K+   +  ++ R++
Sbjct: 319 ATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPLVIGDEHYKVARDVQGILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|295136336|ref|YP_003587012.1| F0F1 ATP synthase subunit beta [Zunongwangia profunda SM-A87]
 gi|294984351|gb|ADF54816.1| F0F1 ATP synthase subunit beta [Zunongwangia profunda SM-A87]
          Length = 502

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G+  + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVVGDAIDGLGNLPKAGEAGLPIHREAPKFEDLSVSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 208 -DYL------GDNLKK----------SVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
            D++      G +LKK          +  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMENGGWDLKKVDKEVMKGSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 EAQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L    
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPDI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +       +  L+ R++E +DI  I G
Sbjct: 388 LGKEHYDCAQRVKELLQRYKELQDIIAILG 417


>gi|284032930|ref|YP_003382861.1| ATP synthase F1 subunit beta [Kribbella flavida DSM 17836]
 gi|283812223|gb|ADB34062.1| ATP synthase F1, beta subunit [Kribbella flavida DSM 17836]
          Length = 484

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV +  GK ++ D+S  +      I  K P     +   +  +TGI+V+D+ TP   G 
Sbjct: 104 GRVWSVTGKCLNQDESEFEITERWPIHRKAPAFDQLESKTEMLETGIKVLDLLTPYVQGG 163

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           +IG+F G+G+GK+ ++  M  R   +     + + VGER RE  + I +     + K + 
Sbjct: 164 KIGLFGGAGVGKTVMIQEMIYRIAHNFGGTSVFAGVGERTREGNDLIHEMEDAGVFKDTA 223

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   K  +VLL +D+I RF  +  E++T  G +P
Sbjct: 224 LVFGQMDEPPGTRLRVALSALTMAEYFRDVKEQDVLLFIDNIFRFTQAGSEVSTLLGRMP 283

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 284 SAVGYQPNLADEMGVLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 341

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR+ D  +   E   V+  +  ++ + +E +DI  I G
Sbjct: 342 LSRDIASRGLYPAVDPLTSTSRILDPQYIGQEHYDVAVRVKQILQKNKELQDIIAILG 399


>gi|183206548|gb|ACC54472.1| ATP synthase beta subunit [Symphyandra hofmannii]
          Length = 488

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 40  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 215

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 216 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 275

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 276 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 333

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 334 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 393

Query: 389 IRLIGG 394
           I  I G
Sbjct: 394 IITILG 399


>gi|119350511|gb|ABL63206.1| AtpB [Microspora sp. UTEX LB 472]
          Length = 392

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +G  + ++ I    P  ++       F+TGI+V+D+  P  
Sbjct: 36  ATLGRIFNVLGEPVDELGPVGNQE-TLPIHRSAPAFVDLDTRLSIFETGIKVVDLLAPYR 94

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 95  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 154

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 155 EKNLAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 214

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   EK      ++   + R++E
Sbjct: 273 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGTAQNVKKTLQRYKE 331

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 332 LQDIIAILG 340


>gi|332976825|gb|EGK13651.1| ATP synthase F1 sector beta subunit [Psychrobacter sp. 1501(2011)]
          Length = 475

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 27/314 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG+PID    +   D    I  + P    +       +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGRPIDEQGPVNAED-HWSIHRQAPSYDEQANSTDLLETGIKVIDLLCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF-----------IE 207
            ++G+F G+G+GK+  +     +       +S+   VGER RE  +F           +E
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVDVE 201

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITR 261
           ++      K  +V    +E P  R    LT +T+AEYF      + KG +VLL +D+I R
Sbjct: 202 NFTN---SKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGKDVLLFVDNIYR 258

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  
Sbjct: 259 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSIQAVYVPADDLT 316

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLI 380
           DP   +  + LD  +VL+R +A +G YP +DPL S SR  D      D   +   +  ++
Sbjct: 317 DPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVIGEDHYNVARGVQEVL 376

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 377 QRYKELKDIIAILG 390


>gi|183206588|gb|ACC54492.1| ATP synthase beta subunit [Campanula creutzburgii]
          Length = 498

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|119350527|gb|ABL63214.1| AtpB [Ourococcus multisporus]
          Length = 392

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 158/310 (50%), Gaps = 26/310 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D    LG  K + S+ I    P  ++       F+TGI+V+D+  P   
Sbjct: 38  GRIFNVLGEPVD---ELGPVKNESSLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRR 94

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E
Sbjct: 95  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 154

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  + 
Sbjct: 155 KNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAG 212

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 213 AEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 270

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   +K       +   + R++
Sbjct: 271 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGDKHYDCAQRVKSTLQRYK 329

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 330 ELQDIIAILG 339


>gi|290969223|ref|ZP_06560748.1| ATP synthase F1, beta subunit [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780729|gb|EFD93332.1| ATP synthase F1, beta subunit [Megasphaera genomosp. type_1 str.
           28L]
          Length = 472

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ +D  D+  + +    I    P    +    +  +TGI+V+D+  P   G 
Sbjct: 93  GRIFNVLGQAVDKVDAKVEAEAYWPIHRPAPKFDEQATGTEILETGIKVVDLIAPYSKGG 152

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +      + K+ 
Sbjct: 153 KIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFTGVGERTREGNDLWNEMKESGVISKTA 212

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +P
Sbjct: 213 LVYGQMNEPPGARMRVGLTGLTMAEYFRDKEHQDVLLFIDNIFRFIQAGSEVSALLGRIP 272

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 273 SAVGYQPTLGTDVGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPAATFAHLDATTV 330

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +AE G YP VDPL S SR+ D      D  +   ++  ++ ++ + +DI  I G
Sbjct: 331 LSRQIAELGIYPAVDPLDSTSRILDPHVIGEDHYQTARAVQAILQKYNDLQDIIAILG 388


>gi|313838310|gb|EFS76024.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL086PA1]
          Length = 484

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  +   E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDSATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|289643099|ref|ZP_06475229.1| ATP synthase F1, beta subunit [Frankia symbiont of Datisca
           glomerata]
 gi|289507063|gb|EFD28032.1| ATP synthase F1, beta subunit [Frankia symbiont of Datisca
           glomerata]
          Length = 480

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V N LG+P+D        D+   I +  P     +   + F TGI+VID+  P   G 
Sbjct: 105 GHVFNVLGEPLDVPSV--DTDVRRSIHATAPAFDQLESKTEMFPTGIKVIDLLAPYVRGG 162

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ ++  M  R +  F  V + + VGER RE  + F+E      +  + 
Sbjct: 163 KIGLFGGAGVGKTVVIQEMINRVAKQFSGVSVFAGVGERTREGNDLFLEMTEAGVINDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRIALAALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDITDPAPHTTFTHLDATTV 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R++++ G YP VDPL S SR+ D  +   E   V+  +  ++ R+++ +DI  I G
Sbjct: 341 LSRAISDLGIYPAVDPLDSSSRILDARYLGQEHYDVAREVQRILQRYKDLQDIIAILG 398


>gi|54023032|ref|YP_117274.1| F0F1 ATP synthase subunit beta [Nocardia farcinica IFM 10152]
 gi|81823233|sp|Q5Z0Y1|ATPB_NOCFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|54014540|dbj|BAD55910.1| putative ATP synthase beta subunit [Nocardia farcinica IFM 10152]
          Length = 482

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D    LG+      I  K P     +   +  +TGI+VID+ TP   G 
Sbjct: 104 GHVFNALGDCLD-TPGLGRDGEQWGIHRKPPSFDQLEGKTELLETGIKVIDLLTPYVKGG 162

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ + 
Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRMRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 283 SAVGYQPTLADEMGELQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDATTE 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           L+R ++++G YP VDPL S SR+ + +   D    V++ +  ++ +++E +DI  I G
Sbjct: 341 LSRPISQKGIYPAVDPLTSTSRILEASIVGDRHFAVANEVKRILQKYKELQDIIAILG 398


>gi|157829067|ref|YP_001495309.1| F0F1 ATP synthase subunit beta [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166222409|sp|A8GTS6|ATPB_RICRS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358727|sp|B0BVB6|ATPB_RICRO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157801548|gb|ABV76801.1| F0F1 ATP synthase subunit beta [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 473

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 80  RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQVLQTYKSLQDIITILG 391


>gi|322367975|ref|ZP_08042544.1| V-type ATP synthase subunit B [Haladaptatus paucihalophilus DX253]
 gi|320551991|gb|EFW93636.1| V-type ATP synthase subunit B [Haladaptatus paucihalophilus DX253]
          Length = 468

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 19/306 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PIDG   +   D   +I+        R+  E+  +TG+  ID    L  G
Sbjct: 84  LGRVLDGSGQPIDGGPEIVP-DRRDDIIGAAINPYAREYPEEFIQTGVSAIDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCF-----------DKVIISLVGERGREVREFIEDYL 210
           Q++ +F+ SG+  + L    AR                 V+   +G    E  EF+ED+ 
Sbjct: 143 QKLPIFSASGLPHNDLALQIARQASVLEDEEEGEESEFAVVFGAMGITAEEANEFMEDFE 202

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               L++SVV +  +D+  + R + P  A+T AEY + + D +VL+IL  +T +  ++RE
Sbjct: 203 RTGALERSVVFMNLADDPAVERTVTPRLALTTAEYLAFEKDYHVLVILTDMTNYCEALRE 262

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I     E+P  RGYP  ++++L +L ER G  E   G++T +  + + GD+   PI D  
Sbjct: 263 IGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGRDGSVTQIPILTMPGDDDTHPIPDLT 322

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRF 383
             I +G I ++R L  +G  PP++PL S+SRL D         AD   +   +     + 
Sbjct: 323 GYITEGQIYIDRDLNSQGIQPPINPLPSLSRLMDDGIGEGLTRADHSGVSDQMYAAYAQG 382

Query: 384 EETRDI 389
           E+ RD+
Sbjct: 383 EDLRDL 388


>gi|289581045|ref|YP_003479511.1| ATP synthase subunit beta [Natrialba magadii ATCC 43099]
 gi|289530598|gb|ADD04949.1| ATP synthase, B subunit [Natrialba magadii ATCC 43099]
          Length = 472

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 148/277 (53%), Gaps = 17/277 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PIDG   +   +   +I+ +     +R+  E+  +TG+  ID    L  G
Sbjct: 84  LGRVLDGSGEPIDGGPEIVP-ESREDIVGEAINPFSREYPEEFIQTGVSGIDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--------------KVIISLVGERGREVREFIE 207
           Q++ +F+GSG+  + L    AR                    VI   +G    E  EF++
Sbjct: 143 QKLPIFSGSGLPHNELALQIARQATVPEEEEAGDDEEGSEFAVIFGAMGITQEEANEFMD 202

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           D+     L++SVV +  +D+  + R + P  A+T AEY + + D +VL+IL  IT +  +
Sbjct: 203 DFERTGALERSVVFMNLADDPAVERTVTPRLALTTAEYLAFEKDYHVLVILTDITNYCEA 262

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI     E+P  RGYP  ++++L +L ER G  E ++G++T +  + + GD+   PI 
Sbjct: 263 LREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGQEGSVTQIPILTMPGDDDTHPIP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           D    I +G IV++R+L  +G  PPV+ L S+SRL D
Sbjct: 323 DLTGYITEGQIVMDRNLNSQGIEPPVNVLPSLSRLMD 359


>gi|183206530|gb|ACC54463.1| ATP synthase beta subunit [Campanula carpatha]
          Length = 498

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|94971358|ref|YP_593406.1| F0F1 ATP synthase subunit beta [Candidatus Koribacter versatilis
           Ellin345]
 gi|118573501|sp|Q1IIG8|ATPB_ACIBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|94553408|gb|ABF43332.1| ATP synthase F1 subcomplex beta subunit [Candidatus Koribacter
           versatilis Ellin345]
          Length = 480

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 164/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQ-RVEKGFKTGIRVIDIFTP 157
            GRV+N +G+P+D       G + +E  + +    PA + Q    + F+TGI+VID+  P
Sbjct: 93  LGRVMNVIGEPVDQ-----LGPIMVEKRNPIHRQAPAFDEQATTAEMFETGIKVIDLIQP 147

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVR----EFIEDYL 210
              G +IG+F G+G+GK+ ++     +         +   VGER RE      EF E  +
Sbjct: 148 FLKGGKIGLFGGAGVGKTVVIQELINNVAKQHGGFSVFGGVGERTREGNDLWLEFTEAGV 207

Query: 211 ---GDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
              GD  K K+ +V     E P  R    LTA+T+AEYF   +G + LL +D+I RF  +
Sbjct: 208 ITPGDPSKSKAALVYGQMTEPPGARLRVALTALTVAEYFRDEEGTDTLLFIDNIFRFTQA 267

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++T  G +P A GY  ++ +E+  L ERI  +  ++G++T+V ++ V  D+  DP  
Sbjct: 268 GSEVSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKRGSVTSVQAIYVPADDLTDPAP 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+L E G YP VDPL S SR+ D      E   +   +  ++ +++
Sbjct: 326 ATTFAHLDATTVLSRALTEIGIYPAVDPLGSTSRILDPRIVGQEHYDVAQGVKGILQQYK 385

Query: 385 ETRDIRLIGG 394
           + +DI  I G
Sbjct: 386 DLQDIIAILG 395


>gi|7708676|emb|CAB90016.1| ATP synthase beta subunit [Thunbergia coccinea]
          Length = 484

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|11467561|ref|NP_043707.1| ATP synthase CF1 beta subunit [Odontella sinensis]
 gi|1352032|sp|P49647|ATPB_ODOSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|297868|emb|CAA51161.1| ATPase [Odontella sinensis]
 gi|1185256|emb|CAA91739.1| ATP synthase CF1 subunit beta [Odontella sinensis]
          Length = 475

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N +G+P+D  GD S    D ++ I  + P     +     F+TGI+V+D+  P
Sbjct: 89  STLGRIFNVIGEPVDEQGDVSY---DETLPIHREAPAFTELETKPSIFETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+     
Sbjct: 146 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N K+S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 205 VINENNFKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R+LA +G YP VDPL S S +      S +  ++  ++   + R+
Sbjct: 323 PATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVSGEHYEIAETVKETLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|320335339|ref|YP_004172050.1| V-type ATP synthase subunit beta [Deinococcus maricopensis DSM
           21211]
 gi|319756628|gb|ADV68385.1| V-type ATP synthase beta chain [Deinococcus maricopensis DSM 21211]
          Length = 469

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 151/276 (54%), Gaps = 11/276 (3%)

Query: 94  RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           R+  S    GR  + LG+PIDG  + + +  +S+   +  P A  R + E+  +TGI  I
Sbjct: 81  RLGVSKEMIGRRFDGLGRPIDGLPNVVAEKRVSINGQAMNPAA--RAKPEEFIQTGISTI 138

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206
           D+ T L  GQ++ +F+GSG+  + L +  AR            V+ + +G   REV  F 
Sbjct: 139 DVNTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L +SV+ +  +D+  + R + P  A+T AEY +   G +VL+IL  +T +  
Sbjct: 199 QEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCE 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI     E+P  RG+P  ++++L  L ER G  E + G++T +  + +  D+   PI
Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVIEGKPGSVTQIPILSMPDDDITHPI 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G IV++R+L  +G  PP++PL S+SRL
Sbjct: 319 PDLTGYITEGQIVVDRALNAKGVNPPINPLPSLSRL 354


>gi|315274370|ref|ZP_07869346.1| ATP synthase subunit beta 1 [Listeria marthii FSL S4-120]
 gi|313615981|gb|EFR89149.1| ATP synthase subunit beta 1 [Listeria marthii FSL S4-120]
          Length = 447

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 24  EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 79

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG     +  +   I  + P        ++   TGI+VID+  P+  G +
Sbjct: 80  RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 138

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F  V     GER RE +  + E      L 
Sbjct: 139 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 193

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 194 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 253

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 254 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 311

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + 
Sbjct: 312 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 371

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K VH+   I +FL Q    S     +E +F EI
Sbjct: 372 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 414


>gi|302505577|ref|XP_003014495.1| hypothetical protein ARB_07057 [Arthroderma benhamiae CBS 112371]
 gi|291178316|gb|EFE34106.1| hypothetical protein ARB_07057 [Arthroderma benhamiae CBS 112371]
          Length = 623

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G 
Sbjct: 236 GRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGG 294

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         D
Sbjct: 295 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQLD 353

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 354 GESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 413

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 414 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAH 471

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI 
Sbjct: 472 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDII 531

Query: 391 LIGG 394
            I G
Sbjct: 532 AILG 535


>gi|297624240|ref|YP_003705674.1| H+transporting two-sector ATPase alpha/subunit beta central region
           [Truepera radiovictrix DSM 17093]
 gi|297165420|gb|ADI15131.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Truepera radiovictrix DSM 17093]
          Length = 472

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 151/296 (51%), Gaps = 14/296 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+  S    GR  N +G+PIDG   +   D  + I       + RQ+ E+  +TGI  ID
Sbjct: 83  RLGVSREMIGRRFNGIGEPIDGLPEV-VADKRLPIGGAPINPVARQKPEEFIQTGISTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207
               L  GQ++ +F+GSG+  + L +  AR            V+ + +G   RE+  F +
Sbjct: 142 TLITLVRGQKLPIFSGSGLPANELAAQIARQAKVLGEGSEFAVVFAAMGVTQREITYFTQ 201

Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           ++     L +SV+ +  +D+  + R + P  A+T AEY + + D +VL+IL  +T +  +
Sbjct: 202 EFERTGALARSVLFLNKADDPAVERLLTPKMALTAAEYLAFEHDYHVLVILTDMTNYCEA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI     E+P  RGYP  ++++L  + ER G  E  KG++T +  + +  D+   PI 
Sbjct: 262 LREIGGAREEIPGRRGYPGYMYTDLASIYERAGVVEGRKGSVTQLPILTMPDDDVTHPIP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376
           D    I +G I L R+L  +G YPP++P  S+SRL +         AD K +   L
Sbjct: 322 DLTGYITEGQIYLARNLHSQGIYPPINPGPSLSRLMNNGIGKGKTRADHKNIADQL 377


>gi|241729762|ref|XP_002413810.1| F0F1-type ATP synthase, beta subunit, putative [Ixodes scapularis]
 gi|215507626|gb|EEC17118.1| F0F1-type ATP synthase, beta subunit, putative [Ixodes scapularis]
          Length = 563

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 157/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +   D  + I    P  +     ++   TGI+V+D+  P   G
Sbjct: 176 LGRIMNVIGEPIDERGPI-PSDKFLSIHQDAPEFVEMSVEQEILVTGIKVVDLLAPYSKG 234

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 235 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 293

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +++AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 294 KDKTSKVSLVYGQMNEPPGARARVALTGLSVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 353

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 354 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 411

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D      E   +   +  ++  ++  +D
Sbjct: 412 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNVVGQEHYDIARGVQKILQDYKSLQD 471

Query: 389 IRLIGG 394
           I  I G
Sbjct: 472 IIAILG 477


>gi|11320813|dbj|BAB18459.1| ATP synthase beta-subunit [Lobomonas monstruosa]
          Length = 376

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D  GD    K + ++ I    P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVDEMGDV---KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK  +   ++   + R+
Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYETAQNVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|169260965|gb|ACA52084.1| ATP synthase beta subunit [Isoetes sp. Rai 1005]
          Length = 493

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D   S+     +  I    P           F+TGI+V+D+  P  
Sbjct: 103 ATLGRIFNVLGEPVDNSGSV-DASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +     +  
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIN 221

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPVT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEQHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|295836483|ref|ZP_06823416.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB74]
 gi|295836486|ref|ZP_06823419.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB74]
 gi|295826052|gb|EFG64644.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB74]
 gi|295826055|gb|EDY45954.2| ATP synthase F1, beta subunit [Streptomyces sp. SPB74]
          Length = 480

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 158/298 (53%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++  +          I    P     +   + F+TGI+VID+ TP   G 
Sbjct: 101 GKVFNTLGEVLNKPEENANVGERWAIHRTAPRFDELESKTEMFETGIKVIDLLTPYVKGG 160

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + I++      + K+ 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++E+G YP VDPL S SR+ D  + A D       + +++ ++++ +DI  I G
Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAKDHYDTAMRVKNILQKYKDLQDIIAILG 396


>gi|225849603|ref|YP_002729837.1| V-type ATP synthase subunit B [Persephonella marina EX-H1]
 gi|225645972|gb|ACO04158.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Persephonella marina EX-H1]
          Length = 447

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 170/330 (51%), Gaps = 9/330 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSAC 100
           V  G+ VV +  N D  G+V  +  DI  I  +G    I+  D+   F    F+I  S  
Sbjct: 24  VRYGEKVVIRTDNRDITGKVSVLTEDITVIEILGESSGINPQDVRVRFTGEPFKIPVSEG 83

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GR+++  G P+D   S+   +  ++I  +      R   E+   TGI  ID    L  
Sbjct: 84  MLGRILDPFGNPLDELGSIIP-EAFLDISGEAYNPSKRLYPEEIIYTGISSIDGLNTLVK 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGREVREFIEDYL-GDNLK 215
           GQ++ VFA SG+    L++   R           ++  VG +       IED   G N  
Sbjct: 143 GQKLPVFAVSGVPTDQLVAQIVRQIKTGSENRATVLCAVGVKYETANYLIEDITSGGNFP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274
           K+ V +  +DE P+   ++  +A+T++E+ +  KG +V++++  +T +  ++REI++  G
Sbjct: 203 KTAVFLNLADEPPVNSLISVRSALTLSEFLAFEKGYDVVVVIYDMTNYCDALREISSKRG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  +GYP  ++S+L  + ER G  +  KG++T +  + +  D+   PI D    I +G
Sbjct: 263 EIPGRKGYPGYMYSDLASIYERAGVLKGMKGSVTQIPVLTMPDDDITHPIPDLTGYITEG 322

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            IVL+RSL + G YPPV+ L S+SRL ++A
Sbjct: 323 QIVLDRSLHQRGVYPPVNVLPSLSRLMNRA 352


>gi|157964949|ref|YP_001499773.1| F0F1 ATP synthase subunit beta [Rickettsia massiliae MTU5]
 gi|157844725|gb|ABV85226.1| ATP synthase beta chain [Rickettsia massiliae MTU5]
          Length = 499

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 19/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVI 152
           RI       GR++N +G+PIDG   +   ++S   + K  P    Q  E+    TGI+VI
Sbjct: 106 RIPVGTETLGRIMNVVGEPIDGKGDIKSSNISS--IYKPAPDFTNQSTERNILVTGIKVI 163

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + 
Sbjct: 164 DLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 223

Query: 210 LGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259
           +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +D+I
Sbjct: 224 IDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNI 283

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+
Sbjct: 284 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVPADD 341

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  +  
Sbjct: 342 LTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQ 401

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 402 VLQTYKSLQDIIAILG 417


>gi|111225280|ref|YP_716074.1| F0F1 ATP synthase subunit beta [Frankia alni ACN14a]
 gi|111152812|emb|CAJ64556.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Frankia alni
           ACN14a]
          Length = 486

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V N LG P+D D      +    I  + P     +   + F TGI+VID+  P   G 
Sbjct: 112 GHVFNVLGTPLDVDKV--DAETRWSIHRQAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 169

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ ++    R  +  F  V + + VGER RE  + F+E      ++ + 
Sbjct: 170 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 229

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 230 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 289

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 290 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQTV 347

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+++ G YP V PL S SR+ D  +   E       +  ++ R+++ +DI  I G
Sbjct: 348 LDRSISDLGIYPAVSPLDSNSRILDARYLGQEHYDTAREVQRILQRYKDLQDIIAILG 405


>gi|297539943|ref|YP_003675712.1| ATP synthase F1 subunit beta [Methylotenera sp. 301]
 gi|297259290|gb|ADI31135.1| ATP synthase F1, beta subunit [Methylotenera sp. 301]
          Length = 479

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 156/305 (51%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 97  GRIMDVLGRPIDEAGPI-DCDERRAIHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGG 155

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +         D
Sbjct: 156 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMAEAGVIKLD 214

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           ++K+S V  V    +E P  R    L+ +T+AE F  +G +VL  +D+I R+  +  E++
Sbjct: 215 DMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 274

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +   
Sbjct: 275 ALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 332

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D     +E   V+ S+   + R++E RDI
Sbjct: 333 HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARSVQQTLQRYKELRDI 392

Query: 390 RLIGG 394
             I G
Sbjct: 393 IAILG 397


>gi|302656393|ref|XP_003019950.1| hypothetical protein TRV_05996 [Trichophyton verrucosum HKI 0517]
 gi|291183727|gb|EFE39326.1| hypothetical protein TRV_05996 [Trichophyton verrucosum HKI 0517]
          Length = 623

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G 
Sbjct: 236 GRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGG 294

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         D
Sbjct: 295 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQLD 353

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 354 GESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 413

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 414 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAH 471

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI 
Sbjct: 472 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDII 531

Query: 391 LIGG 394
            I G
Sbjct: 532 AILG 535


>gi|23503621|dbj|BAC20407.1| ATP synthase beta-subunit [Carteria cerasiformis]
          Length = 376

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGPVETQE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEV 209

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 210 SALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETR 387
           S LD   VL+R LA +G YP VDPL S S +  + W   EK   S+  +   + R++E +
Sbjct: 268 SHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDSAQKVKQTLQRYKELQ 326

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 327 DIIAILG 333


>gi|183206496|gb|ACC54446.1| ATP synthase beta subunit [Campanula laciniata]
          Length = 498

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|302348220|ref|YP_003815858.1| V-type ATP synthase subunit B [Acidilobus saccharovorans 345-15]
 gi|302328632|gb|ADL18827.1| V-type ATP synthase subunit B [Acidilobus saccharovorans 345-15]
          Length = 467

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 153/287 (53%), Gaps = 19/287 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           SA   GR  +ALGKPIDG   +    K D++    S + PA+ R   E   +TG+  ID 
Sbjct: 86  SADMLGRTFDALGKPIDGGPDIIAEEKYDING---SPINPAV-RAYPEDFIQTGVSAIDG 141

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGRE---VREF 205
              L  GQ++ +F+G+G+  + L +  AR            V+ + +G +  +    R+F
Sbjct: 142 MNTLVRGQKLPIFSGTGLPHNELAAQIARQATVRGEEEEFSVVFAAIGIKYDDYMFFRKF 201

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
            E+     +K+  + V  +DE  +LR + P  A+T+AEY + + D +VL+IL  +T +A 
Sbjct: 202 FEE--TGAMKRVAMFVNLADEPAMLRLVTPRAALTLAEYLAYENDMHVLVILTDMTNYAE 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI+    E+P  +GYP  ++S+L  + ER G     KG+IT +  + +  D+   PI
Sbjct: 260 ALREISAAREEVPGRQGYPGYMYSDLASIYERAGRVHGRKGSITQMPILTMPNDDITHPI 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            D    I +G IVL+R L   G YPP++ L S+SRL  +   A + +
Sbjct: 320 PDLTGYITEGQIVLSRDLYNRGIYPPINVLMSLSRLMKEGIGAGKTR 366


>gi|47095163|ref|ZP_00232775.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|254827524|ref|ZP_05232211.1| ATP synthase F1 [Listeria monocytogenes FSL N3-165]
 gi|254899580|ref|ZP_05259504.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes J0161]
 gi|254913217|ref|ZP_05263229.1| ATP synthase F1 [Listeria monocytogenes J2818]
 gi|254937598|ref|ZP_05269295.1| ATP synthase F1 [Listeria monocytogenes F6900]
 gi|284803169|ref|YP_003415034.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578]
 gi|284996310|ref|YP_003418078.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923]
 gi|47016508|gb|EAL07429.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258599900|gb|EEW13225.1| ATP synthase F1 [Listeria monocytogenes FSL N3-165]
 gi|258610198|gb|EEW22806.1| ATP synthase F1 [Listeria monocytogenes F6900]
 gi|284058731|gb|ADB69672.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578]
 gi|284061777|gb|ADB72716.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923]
 gi|293591217|gb|EFF99551.1| ATP synthase F1 [Listeria monocytogenes J2818]
          Length = 456

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYHTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG       ++   I    P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPEPA-AEVKWPIFRDQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F  V     GER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNSVFTGV-----GERVREGIGLYKELEASGVLP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K VH+   I +FL Q    S     +E  F EI
Sbjct: 381 GMAELSDED-RKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEI 423


>gi|183206604|gb|ACC54500.1| ATP synthase beta subunit [Roella ciliata]
          Length = 488

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTWPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|118917394|dbj|BAF40503.1| ATP synthase beta subunit [Piriqueta cistoides]
          Length = 489

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D  +   + +  PA  +   E   F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---DLGPVDTRTASPIHRSAPAFIQLDTELSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG--- 211
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++      
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 214 INEENLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQSVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       DE       +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQSQIVGDEHYDTAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAIMG 401


>gi|91178124|gb|ABE27297.1| mitochondrial F-ATPase beta subunit [Yarrowia lipolytica]
          Length = 337

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 160/305 (52%), Gaps = 18/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN  G+PID    + +    + I +  P    +    +  +TGI+V+D+  P   G 
Sbjct: 20  GRIINVCGEPIDERGPI-EASKYLPIHADPPTFAEQSTSAEVLETGIKVVDLLAPYARGG 78

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214
           +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  NL
Sbjct: 79  KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFCG-VGERTREGNDLYREMKETGV-INL 136

Query: 215 K---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           +   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 137 EGESKVTLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVS 196

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  +
Sbjct: 197 ALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSVTSVQAVYVPADDLTDPAPATTFA 254

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SRL D      +   + S++   +  ++  +DI
Sbjct: 255 HLDATTVLSRGISELGIYPAVDPLDSKSRLLDIDVVGKEHYDVASNVQQTLQAYKSLQDI 314

Query: 390 RLIGG 394
             I G
Sbjct: 315 IAILG 319


>gi|300689832|ref|YP_003750827.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           PSI07]
 gi|299076892|emb|CBJ49505.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           PSI07]
          Length = 467

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPIA-CDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D +    +  ++   +   + R++E RDI  I G
Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVADRVKKTLQRYKELRDIIAILG 385


>gi|183206498|gb|ACC54447.1| ATP synthase beta subunit [Campanula tubulosa]
          Length = 498

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IITILG 409


>gi|329894812|ref|ZP_08270612.1| ATP synthase beta chain [gamma proteobacterium IMCC3088]
 gi|328922706|gb|EGG30040.1| ATP synthase beta chain [gamma proteobacterium IMCC3088]
          Length = 465

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 21/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +G+ + +  I  K P        E+  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDEKGPIGEEERA-SIHRKAPTYEELAASEELLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205
            G ++G+F G+G+GK+  +     +   +   +S+   VGER RE  +F           
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYYEMQESKVVD 199

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           +E++      K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +
Sbjct: 200 VENFTN---SKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++  E+  L ERI  +    G+IT++ +V V  D+  DP  
Sbjct: 257 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTRVGSITSIQAVYVPADDLTDPSP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD  +VL+R +A +G YP VDPL S SR  D      E       +  ++ R++
Sbjct: 315 ATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLVGQEHYNAARGVQTVLQRYK 374

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 375 ELKDIIAILG 384


>gi|225010190|ref|ZP_03700662.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-3C]
 gi|225005669|gb|EEG43619.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-3C]
          Length = 502

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G   + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGNLPKAGKDGLPIHRQAPRFEDLSTATEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFLHSMEEGGWDLTKVDKSAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              D       +  L+ R++E +DI  I G
Sbjct: 388 LGKDHYGCAQRVKELLQRYKELQDIIAILG 417


>gi|22651728|gb|AAM26936.1| ATP synthase beta subunit [Drosera capensis]
          Length = 475

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
           +   GR+ N LG+PID    +     S   + + PPA  +   +   F+TGI+V+D+  P
Sbjct: 88  SLTLGRIFNVLGQPIDNLGPVATDTTSP--IHRSPPAFIQLETKLSIFETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL 214
              G + G+F G+G+GK+ L+     +       +S+   VGER RE  +  ++     +
Sbjct: 146 YRRGGKTGLFGGAGVGKTVLIMELINNIAKAHRGVSVFAGVGERTREGNDLYKEMKESGV 205

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 206 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 266 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 323

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++
Sbjct: 324 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGDEHYETAQQVKQTLQRYK 383

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 384 EVQDIIAILG 393


>gi|85374584|ref|YP_458646.1| F0F1 ATP synthase subunit beta [Erythrobacter litoralis HTCC2594]
 gi|123005015|sp|Q2N8Z2|ATPB_ERYLH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|84787667|gb|ABC63849.1| ATP synthase beta subunit [Erythrobacter litoralis HTCC2594]
          Length = 485

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +G  D +  I ++ P  +++        TGI+VID+  P   G
Sbjct: 93  LGRIMNVVGEPIDMRGPVG-ADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   ++L   +    
Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKN 211

Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                     K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  
Sbjct: 212 EAGEAISEGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDEEGQDVLFFVDNIFRFTQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 272 AGSEVSALLGRIPSAVGYQPTLSTDMGNLQERI--TSTTKGSITSVQAIYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD    LNR+++E G YP VDPL S SR L  +    +  +    +   + ++
Sbjct: 330 PATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARKVQETLQKY 389

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 390 KSLQDIIAILG 400


>gi|152980404|ref|YP_001355317.1| F0F1 ATP synthase subunit beta [Janthinobacterium sp. Marseille]
 gi|166201713|sp|A6T470|ATPB_JANMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151280481|gb|ABR88891.1| F-type H+-transporting ATPase beta chain [Janthinobacterium sp.
           Marseille]
          Length = 466

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  + +  G ++ + G     P      GR+++ LG PID    +   + +  
Sbjct: 49  IVRTIALGTSDGLRRGMIIQNTGNPITVPVGTATLGRIMDVLGNPIDECGPVSH-ERTAS 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        +   +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 108 IHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 167

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAP 235
           +     V    VGER RE  +F  +     +         K  +V    +E P  R    
Sbjct: 168 AHSGLSVFAG-VGERTREGNDFYHEMADAKVVDLENPANSKVAMVYGQMNEPPGNRLRVA 226

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +T+AE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 227 LTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 287 RI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 344

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           S SR  D      D      ++   + R++E RDI  I G
Sbjct: 345 STSRQLDPLVVGQDHYDTARAVQGTLQRYKELRDIIAILG 384


>gi|134096552|ref|YP_001101627.1| F0F1 ATP synthase subunit beta [Herminiimonas arsenicoxydans]
 gi|166201712|sp|A4GAG9|ATPB_HERAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|133740455|emb|CAL63506.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Herminiimonas arsenicoxydans]
          Length = 466

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 164/340 (48%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +G  + +  G ++ + G     P      GR+++ LG PID    +   + +  
Sbjct: 49  IVRTIALGTSDGLRRGMIIQNTGNPITVPVGKATLGRIMDVLGNPIDECGPVSH-ERTAS 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        +   +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 108 IHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 167

Query: 184 SDCFDKVIISLVGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILRKMAP 235
           +     V    VGER RE  +F        + D       K  +V    +E P  R    
Sbjct: 168 AHSGLSVFAG-VGERTREGNDFYHEMADAKVVDLENPENSKVAMVYGQMNEPPGNRLRVA 226

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +T+AE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ RL E
Sbjct: 227 LTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL 
Sbjct: 287 RI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 344

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           S SR  D      D      ++   + R++E RDI  I G
Sbjct: 345 STSRQLDPLVVGQDHYDTARAVQGTLQRYKELRDIIAILG 384


>gi|183206584|gb|ACC54490.1| ATP synthase beta subunit [Campanula hierapetrae]
          Length = 497

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 49  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 108

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 109 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 165

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 166 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 224

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 225 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 284

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 285 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 342

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 343 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 402

Query: 389 IRLIGG 394
           I  I G
Sbjct: 403 IITILG 408


>gi|124516445|gb|EAY57953.1| ATP synthase F1, beta subunit [Leptospirillum rubarum]
          Length = 463

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 163/308 (52%), Gaps = 27/308 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNR-QRVEKGFKTGIRVIDIFTP 157
            GR+++ LG P+D       G ++ E    + + PP         + F+TGI+V+D+  P
Sbjct: 83  LGRMMDVLGNPVDE-----AGPITAEARRSIHREPPGFEELASATEVFETGIKVVDLIAP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL 214
              G + G+F G+G+GK+ ++    R+   +     + + VGER RE  +     L + +
Sbjct: 138 FAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGVGERTREGND-----LWNEM 192

Query: 215 KKSVVVVATS------DESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
           K+S V+  TS      +E P +R    LT +T AEYF   +  +VL  +D+I RF  +  
Sbjct: 193 KESKVIDKTSLVYGQMNEPPGVRLRVALTGLTQAEYFRDEERRDVLFFIDNIFRFTLAGA 252

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 253 EVSALLGRMPSAVGYQPTLAVEMGGLQERI--TSTKKGSITSVQAVYVPADDLTDPAPAT 310

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             S LD  +VL+R +AE G YP VDPL S SR+ D     +E   V+ ++   + ++++ 
Sbjct: 311 TFSHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPMIVGEEHYGVARAVQKTLQKYKDL 370

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 371 QDIIAILG 378


>gi|226944078|ref|YP_002799151.1| F0F1 ATP synthase subunit beta [Azotobacter vinelandii DJ]
 gi|226719005|gb|ACO78176.1| ATP synthase F1, beta subunit [Azotobacter vinelandii DJ]
          Length = 473

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 176/377 (46%), Gaps = 15/377 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S++      VT  +    +GD +     + + L   ++ +LD   +  + +     L
Sbjct: 8   GLVSAVRGAVIDVTFPAGLPPIGDALAILRDDGEPLLAEVQAHLDARRVRAIALAATSGL 67

Query: 84  GDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
              V      G  R+       GR+++  G   D    L        I    PP   +  
Sbjct: 68  PRGVMARTLGGPLRVPVGEAVLGRLLDVGGVVGDKGPPLPDDVPRRPIHRSPPPLAAQAA 127

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLV 195
             + F TGI+VID+ TPL  G +  +F G+G+GK+ L+     +M  R       + + V
Sbjct: 128 TSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGV 185

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253
           GER RE  E + D      L  +V+V    +E P  R   PLTA++IAEYF   +  NVL
Sbjct: 186 GERSREGHEMLLDMRNSGVLPHTVLVYGQMNEPPGARWRVPLTALSIAEYFRDERRQNVL 245

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++D++ RF  +  E++   G LP   GY  ++  E+  L ERI         +TA+ +V
Sbjct: 246 LLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLADEVAALQERI--VSVGGVAVTAIEAV 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   ++ + +D  +VL+R++A +G YP VDP+AS S L D     A+   +
Sbjct: 304 YVPADDFTDPAVTALAAHVDSMVVLSRAMAAQGMYPAVDPIASSSLLLDPLVVGAEHVAI 363

Query: 373 VSSLTHLIHRFEETRDI 389
            +    +I  +   +D+
Sbjct: 364 ATEARRIIEHYRSLQDV 380


>gi|170293963|gb|ACB13075.1| ATP synthase beta subunit [Bracteacoccus terrestris]
          Length = 366

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 22  GRIFNVLGEPVDQMGPVQTKE-TLPIHRSSPAFVDLDTTLSIFETGIKVVDLLAPYRRGG 80

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 81  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYCEMKESGVIVEKN 140

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 141 LSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 198

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 256

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   EK      ++   + R++E 
Sbjct: 257 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|103487769|ref|YP_617330.1| F0F1 ATP synthase subunit beta [Sphingopyxis alaskensis RB2256]
 gi|118573753|sp|Q1GQS5|ATPB_SPHAL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|98977846|gb|ABF53997.1| ATP synthase F1, beta subunit [Sphingopyxis alaskensis RB2256]
          Length = 513

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +   D++  I +K P  +++        TGI+VID+  P   G
Sbjct: 121 LGRILNVIGEPIDERGPV-NSDMTAPIHAKAPEFVDQSTEASILVTGIKVIDLIAPYAKG 179

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   ++L   +    
Sbjct: 180 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 239

Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                     K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  
Sbjct: 240 ADGNPTPDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 299

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 300 AGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTTKGSITSVQAIYVPADDLTDPA 357

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD    L+R+++E G YP VDPL S SR+   A    E  +    +   + ++
Sbjct: 358 PATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVLTPAIVGQEHYETARRVQETLQKY 417

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 418 KSLQDIIAILG 428


>gi|256842066|ref|ZP_05547571.1| ATP synthase F1, beta subunit [Parabacteroides sp. D13]
 gi|256736382|gb|EEU49711.1| ATP synthase F1, beta subunit [Parabacteroides sp. D13]
          Length = 505

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PIDG   L K D ++ I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 94  GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +++ F   + + VGER RE    +RE I+  +   
Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     +V    +E P  R    L+ +TIAE F  K 
Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +K
Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
               E       +  ++ R +E +DI
Sbjct: 389 IVGKEHYDTAQRVKQILQRNKELQDI 414


>gi|154276988|ref|XP_001539339.1| ATP synthase beta chain, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150414412|gb|EDN09777.1| ATP synthase beta chain, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 522

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K  +   I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVTGDPIDERGPI-KHTMKAPIHAEAPEYVEQATSAEVLVTGIKVVDLLAPYARG 192

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 193 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 251

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 252 DGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 311

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 312 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 369

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E   V++ +  ++  ++  +DI
Sbjct: 370 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNVATRVQQMLQEYKSLQDI 429

Query: 390 RLIGG 394
             I G
Sbjct: 430 IAILG 434


>gi|121713468|ref|XP_001274345.1| ATP synthase F1, beta subunit, putative [Aspergillus clavatus NRRL
           1]
 gi|119402498|gb|EAW12919.1| ATP synthase F1, beta subunit, putative [Aspergillus clavatus NRRL
           1]
          Length = 520

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 16/313 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I       GR++N  G PID    + K      I ++ P  + +    +   TGI+V+D
Sbjct: 122 KIPVGPATLGRIVNVTGDPIDERGPI-KATKFAPIHAEAPEFIEQSTSAEILVTGIKVVD 180

Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           +  P   G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   + 
Sbjct: 181 LLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEM 239

Query: 210 LG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
                   D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF
Sbjct: 240 QETGVIKLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRF 299

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  D
Sbjct: 300 TQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTD 357

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R ++E G YP VDPL S SR+ D     +E  +  + +  ++ 
Sbjct: 358 PAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYQTATRVQQMLQ 417

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 418 EYKSLQDIIAILG 430


>gi|220910365|ref|YP_002485676.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 7425]
 gi|254808143|sp|B8HP55|ATPB_CYAP4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219866976|gb|ACL47315.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7425]
          Length = 485

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 155/306 (50%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + +  I    P   N +     F+TGI+V+D+ TP   G
Sbjct: 97  LGRIFNVLGEPVDEKGTV-NSETTFPIHRAAPAFTNLETKPSVFETGIKVVDLLTPYRRG 155

Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ ++        +      +   VGER RE  +   + +  N+    
Sbjct: 156 GKIGLFGGAGVGKTVIMMELINNIATKHGGVSVFGGVGERTREGNDLYNEMIESNVINKD 215

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 216 DPSQSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 275

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +  
Sbjct: 276 SALLGRMPSAVGYQPTLGTDVGELQERI--TSTNEGSITSIQAVYVPADDLTDPAPATTF 333

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LDG  VL+R LA +G YP VDPL S S +       +   K   ++   + R++E +D
Sbjct: 334 AHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPGIVGEAHYKTARAVQATLQRYKELQD 393

Query: 389 IRLIGG 394
           I  I G
Sbjct: 394 IIAILG 399


>gi|229587163|ref|YP_002845664.1| F0F1 ATP synthase subunit beta [Rickettsia africae ESF-5]
 gi|259585450|sp|C3PLT1|ATPB_RICAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|228022213|gb|ACP53921.1| ATP synthase beta chain [Rickettsia africae ESF-5]
          Length = 473

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 80  RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQVLQTYKSLQDIITILG 391


>gi|71370874|gb|AAZ30666.1| ATP synthase beta subunit [Leucosolenia sp. KP-2005]
          Length = 404

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 18/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     S  I ++ P  ++    ++  +TGI+V+D+  P   G
Sbjct: 64  LGRIMNVIGEPIDERGPI-DAKASAPIHAEAPEFVDMSVEQEILETGIKVVDLLAPYAKG 122

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   +   
Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIVGGVIVL 181

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LT +T+AEYF  K G +VLL +D+I RF  +  E+
Sbjct: 182 DKPGSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI   E   G+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGSMQERITTPE---GSITSVQAIYVPADDLTDPAPATTF 298

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D      E   ++ S+  ++  ++  +D
Sbjct: 299 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNTVGMEHYTIARSVQKILQDYKSLQD 358

Query: 389 IRLIGG 394
           I  I G
Sbjct: 359 IIAILG 364


>gi|158425749|ref|YP_001527041.1| F0F1 ATP synthase subunit beta [Azorhizobium caulinodans ORS 571]
 gi|190358256|sp|A8HS10|ATPB_AZOC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158332638|dbj|BAF90123.1| ATP synthase F1 beta subunit [Azorhizobium caulinodans ORS 571]
          Length = 478

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 26/315 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR++N +G+ +D    LG   G+    I  + P    +    +   TGI+V+D+  P
Sbjct: 84  ATLGRIMNVIGEAVD---ELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   
Sbjct: 141 YSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESK 199

Query: 214 LK-------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           +              K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I 
Sbjct: 200 VNVDPHENNGSSAGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIF 259

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+ 
Sbjct: 260 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDL 317

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379
            DP   +  + LD   VL+RS+AE+G YP VDPL S SR+       +E   V+  +   
Sbjct: 318 TDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPLVIGEEHYNVARQVQQT 377

Query: 380 IHRFEETRDIRLIGG 394
           + R++  +DI  I G
Sbjct: 378 LQRYKALQDIIAILG 392


>gi|153834312|ref|ZP_01986979.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
 gi|148869320|gb|EDL68334.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
          Length = 467

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  ++    + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +    
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR  D      E   +   +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|23503619|dbj|BAC20406.1| ATP synthase beta-subunit [Carteria crucifera]
          Length = 376

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGPVETQE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|284166612|ref|YP_003404891.1| ATP synthase, B subunit [Haloterrigena turkmenica DSM 5511]
 gi|284016267|gb|ADB62218.1| ATP synthase, B subunit [Haloterrigena turkmenica DSM 5511]
          Length = 471

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 17/277 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G PIDG   +   D   +I+ K     +R+  E+  +TG+  ID    L  G
Sbjct: 84  LGRVLDGSGNPIDGGPEIVP-DERHDIVGKAINPYSREYPEEFIQTGVSAIDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--------------KVIISLVGERGREVREFIE 207
           Q++ +F+ SG+  + L    AR                    V+   +G    E  EF++
Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEEDEGGDGDEGSEFAVVFGAMGITAEEANEFMD 202

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           D+     L++SVV +  +D+  + R++ P  A+T AEY + + D +VL+IL  +T +  +
Sbjct: 203 DFERTGALERSVVFMNLADDPAVERQVTPRLALTTAEYLAFEKDYHVLVILTDMTNYCEA 262

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI     E+P  RGYP  ++++L +L ER G  E ++G++T +  + + GD+   PI 
Sbjct: 263 LREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGKEGSVTQIPILTMPGDDETHPIP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           D    I +G I+++R L  +G  PPV+ L S+SRL D
Sbjct: 323 DLTGYITEGQIMMDRDLNSQGIEPPVNVLPSLSRLMD 359


>gi|187735013|ref|YP_001877125.1| ATP synthase F1, beta subunit [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425065|gb|ACD04344.1| ATP synthase F1, beta subunit [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 473

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 163/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIF 155
           C  GR+ N LG+ +D      +G LS   M  +    PP   +    +  +TGI+VID+ 
Sbjct: 90  CVLGRIFNVLGEAVDE-----RGGLSCAGMKSIHRGAPPLDEQSTSTEVLETGIKVIDLI 144

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212
            P   G +IG F G+G+GK+ L+     +    +  +S+   VGER RE  +   + +  
Sbjct: 145 CPFLKGGKIGAFGGAGVGKTVLIMELINNIAKARSGLSVFAGVGERTREGNDLYNEMIES 204

Query: 213 ---NLKKS-----VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
              NL+K       +V    +E P  R    L+A+T+AEYF   +  +VLL +D+I RF+
Sbjct: 205 GVINLEKPEESKVALVYGQMNEPPGARLRVALSALTMAEYFRDEEHKDVLLFIDNIFRFS 264

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G  P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 265 QAGSEVSALLGRTPSAVGYQPNLAEEMADLQERI--TSTKHGSITSMQAVYVPADDLTDP 322

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD  +VL RSLA +G +P V+PL+S S+ LA +    +  ++   +  ++ R
Sbjct: 323 APATTFAHLDSTVVLERSLAAQGLFPAVEPLSSTSKALAPEIVGNEHYEVARGVQMVLQR 382

Query: 383 FEETRDIRLIGG 394
           +++ +D+  I G
Sbjct: 383 YKDLQDMIAILG 394


>gi|118594197|ref|ZP_01551544.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181]
 gi|118439975|gb|EAV46602.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181]
          Length = 474

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   +    I  K P   +     +  +TGI+VID+  P   G 
Sbjct: 93  GRIMDVLGRPIDEVGEIDSKEFR-SIHQKAPAFNDLSPSIELLETGIKVIDLMCPFAKGG 151

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +          
Sbjct: 152 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMAEAGVIQLK 210

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           N+K+S V  V    +E P  R    L+ +T+AE F  +G +VL  +D+I R+  +  E++
Sbjct: 211 NMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 270

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +   
Sbjct: 271 ALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 328

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D     +E   V+ ++   + R++E RDI
Sbjct: 329 HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYSVARAVQSTLQRYKELRDI 388

Query: 390 RLIGG 394
             I G
Sbjct: 389 IAILG 393


>gi|238650821|ref|YP_002916676.1| F0F1 ATP synthase subunit beta [Rickettsia peacockii str. Rustic]
 gi|259585451|sp|C4K227|ATPB_RICPU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|238624919|gb|ACR47625.1| F0F1 ATP synthase subunit beta [Rickettsia peacockii str. Rustic]
          Length = 473

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 80  RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQVLQTYKSLQDIITILG 391


>gi|15608450|ref|NP_215826.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis H37Rv]
 gi|15840761|ref|NP_335798.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis CDC1551]
 gi|31792503|ref|NP_854996.1| F0F1 ATP synthase subunit beta [Mycobacterium bovis AF2122/97]
 gi|121637239|ref|YP_977462.1| F0F1 ATP synthase subunit beta [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148661098|ref|YP_001282621.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis H37Ra]
 gi|148822528|ref|YP_001287282.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis F11]
 gi|167969638|ref|ZP_02551915.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis H37Ra]
 gi|215403152|ref|ZP_03415333.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 02_1987]
 gi|215410949|ref|ZP_03419757.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426637|ref|ZP_03424556.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T92]
 gi|215430196|ref|ZP_03428115.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis EAS054]
 gi|215445488|ref|ZP_03432240.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T85]
 gi|218753018|ref|ZP_03531814.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis GM 1503]
 gi|219557211|ref|ZP_03536287.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T17]
 gi|224989714|ref|YP_002644401.1| FOF1 ATP synthase subunit beta [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799644|ref|YP_003032645.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN
           1435]
 gi|254231568|ref|ZP_04924895.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis C]
 gi|254364207|ref|ZP_04980253.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550318|ref|ZP_05140765.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186249|ref|ZP_05763723.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis CPHL_A]
 gi|260200363|ref|ZP_05767854.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T46]
 gi|260204568|ref|ZP_05772059.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis K85]
 gi|289442749|ref|ZP_06432493.1| ATP synthase F1, beta subunit [Mycobacterium tuberculosis T46]
 gi|289446905|ref|ZP_06436649.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis CPHL_A]
 gi|289554900|ref|ZP_06444110.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN 605]
 gi|289569322|ref|ZP_06449549.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T17]
 gi|289573973|ref|ZP_06454200.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis K85]
 gi|289745056|ref|ZP_06504434.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 02_1987]
 gi|289749867|ref|ZP_06509245.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T92]
 gi|289753387|ref|ZP_06512765.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|289757410|ref|ZP_06516788.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis
           T85]
 gi|289761465|ref|ZP_06520843.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis GM 1503]
 gi|294994866|ref|ZP_06800557.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 210]
 gi|297633862|ref|ZP_06951642.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis KZN
           4207]
 gi|297730849|ref|ZP_06959967.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis KZN
           R506]
 gi|298524814|ref|ZP_07012223.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775482|ref|ZP_07413819.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu001]
 gi|306781607|ref|ZP_07419944.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu002]
 gi|306784035|ref|ZP_07422357.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu003]
 gi|306788397|ref|ZP_07426719.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu004]
 gi|306792725|ref|ZP_07431027.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu005]
 gi|306797130|ref|ZP_07435432.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu006]
 gi|306803010|ref|ZP_07439678.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu008]
 gi|306807200|ref|ZP_07443868.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu007]
 gi|306967399|ref|ZP_07480060.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu009]
 gi|306971591|ref|ZP_07484252.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu010]
 gi|307079306|ref|ZP_07488476.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu011]
 gi|307083874|ref|ZP_07492987.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu012]
 gi|313658182|ref|ZP_07815062.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis KZN
           V2475]
 gi|54036784|sp|P63678|ATPB_MYCBO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|54040854|sp|P63677|ATPB_MYCTU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201718|sp|A1KI98|ATPB_MYCBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201719|sp|A5U209|ATPB_MYCTA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808158|sp|C1AMV4|ATPB_MYCBT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|1322434|emb|CAA97743.1| PROBABLE ATP SYNTHASE BETA CHAIN ATPD [Mycobacterium tuberculosis
           H37Rv]
 gi|13880953|gb|AAK45612.1| ATP synthase F1, beta subunit [Mycobacterium tuberculosis CDC1551]
 gi|31618092|emb|CAD94203.1| PROBABLE ATP SYNTHASE BETA CHAIN ATPD [Mycobacterium bovis
           AF2122/97]
 gi|121492886|emb|CAL71357.1| Probable ATP synthase beta chain atpD [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124600627|gb|EAY59637.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis C]
 gi|134149721|gb|EBA41766.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505250|gb|ABQ73059.1| ATP synthase beta chain AtpD [Mycobacterium tuberculosis H37Ra]
 gi|148721055|gb|ABR05680.1| ATP synthase beta subunit atpD [Mycobacterium tuberculosis F11]
 gi|224772827|dbj|BAH25633.1| FOF1 ATP synthase subunit beta [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321147|gb|ACT25750.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN
           1435]
 gi|289415668|gb|EFD12908.1| ATP synthase F1, beta subunit [Mycobacterium tuberculosis T46]
 gi|289419863|gb|EFD17064.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis CPHL_A]
 gi|289439532|gb|EFD22025.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN 605]
 gi|289538404|gb|EFD42982.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis K85]
 gi|289543076|gb|EFD46724.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T17]
 gi|289685584|gb|EFD53072.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 02_1987]
 gi|289690454|gb|EFD57883.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T92]
 gi|289693974|gb|EFD61403.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis
           EAS054]
 gi|289708971|gb|EFD72987.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis GM 1503]
 gi|289712974|gb|EFD76986.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis
           T85]
 gi|298494608|gb|EFI29902.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216029|gb|EFO75428.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu001]
 gi|308325569|gb|EFP14420.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu002]
 gi|308331267|gb|EFP20118.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu003]
 gi|308335083|gb|EFP23934.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu004]
 gi|308338891|gb|EFP27742.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu005]
 gi|308342505|gb|EFP31356.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu006]
 gi|308346439|gb|EFP35290.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu007]
 gi|308350310|gb|EFP39161.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu008]
 gi|308355011|gb|EFP43862.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu009]
 gi|308358959|gb|EFP47810.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu010]
 gi|308362840|gb|EFP51691.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu011]
 gi|308366507|gb|EFP55358.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu012]
 gi|323720267|gb|EGB29366.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902932|gb|EGE49865.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis W-148]
 gi|328459390|gb|AEB04813.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN
           4207]
          Length = 486

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 160/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +   G+      I  K P     +   +  +TG++V+D+ TP   G 
Sbjct: 107 GHVFNALGDCLD-EPGYGEKFEHWSIHRKPPAFEELEPRTEMLETGLKVVDLLTPYVRGG 165

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 166 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELAEANVLKDTA 225

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AE+F   +G +VLL +D+I RF  +  E++T  G +P
Sbjct: 226 LVFGQMDEPPGTRMRVALSALTMAEWFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 285

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD    
Sbjct: 286 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 343

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++  +G +P VDPLAS S + D +   DE  ++   +  ++ R+++ +DI  I G
Sbjct: 344 LSRAVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 401


>gi|46909235|gb|AAT06135.1| ATP synthase beta subunit [Chaetopterus sp. KJP-2000]
          Length = 427

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 151/280 (53%), Gaps = 18/280 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN +G+PID    +      + I  + P  ++    ++   TGI+V+D+  P   G 
Sbjct: 65  GRIINVIGEPIDERGPVNSKH-QLAIHQEAPEFIDMSVEQEILVTGIKVVDLLAPYSKGG 123

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
           +IG+F G+G+G++ L+    +  A++     V    VGER RE  +   D +        
Sbjct: 124 KIGLFGGAGVGRTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHDMITTGVIDLK 182

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           G+N K S+V     +E P  R    LT +T+AE+F   +G +VLL +D+I RF  +  E+
Sbjct: 183 GNNSKVSLVY-GQMNEPPGARARVCLTGLTVAEFFRDHEGQDVLLFIDNIFRFTQAGSEV 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + LD + VL+R +AE G YP VDPL S SR+ D+     E
Sbjct: 300 AHLDANTVLSRGIAELGIYPAVDPLDSNSRILDRNVVGSE 339


>gi|315320486|ref|YP_004072542.1| ATP synthase CF1 subunit beta [Thalassiosira oceanica CCMP1005]
 gi|283568959|gb|ADB27496.1| ATP synthase CF1 subunit beta [Thalassiosira oceanica CCMP1005]
          Length = 474

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N +G+P+D  GD SL   D ++ I  + P     +     F+TGI+V+D+  P  
Sbjct: 90  LGRIFNVIGEPVDEQGDVSL---DETLPIHREAPAFTELETKPSIFETGIKVVDLLAPYR 146

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+       
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 205

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 206 NSNNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R+LA +G YP VDPL S S +       +E   +  ++   + R++E
Sbjct: 324 TTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVTEEHYAIAENVKETLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|260435742|ref|ZP_05789712.1| ATP synthase F1, beta subunit [Synechococcus sp. WH 8109]
 gi|260413616|gb|EEX06912.1| ATP synthase F1, beta subunit [Synechococcus sp. WH 8109]
          Length = 487

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVNT-SATAPIHRDAPNITELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ER+  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERV--ASTVEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VLNR+LA +G YP VDPL S S +   A   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|258541222|ref|YP_003186655.1| F0F1 ATP synthase subunit beta [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632300|dbj|BAH98275.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-01]
 gi|256635357|dbj|BAI01326.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-03]
 gi|256638412|dbj|BAI04374.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-07]
 gi|256641466|dbj|BAI07421.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-22]
 gi|256644521|dbj|BAI10469.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-26]
 gi|256647576|dbj|BAI13517.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-32]
 gi|256650629|dbj|BAI16563.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653620|dbj|BAI19547.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-12]
          Length = 490

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 19/308 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +     +  I  + P   ++    +   TGI+V+D+  P   G 
Sbjct: 101 GRILNVIGEPIDEKGPIPTSRRA-PIHRQAPAFEDQAAASEILMTGIKVVDLLCPYLKGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212
           +IG+F G+G+GK+ ++     +       +S+   VGER RE  +   +        LG+
Sbjct: 160 KIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKLGE 219

Query: 213 NLK----KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
           N      K  +V    +E P  R    LT +T+AEYF   +  +VL  +D+I RF  +  
Sbjct: 220 NGSTEGSKVALVFGQMNEPPGARARVALTGLTLAEYFRDEENQDVLFFVDNIFRFTQAGS 279

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 280 EVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAA 337

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD   VLNRS+AE G YP VDPL S SR  D      E   V+  +  ++  ++  
Sbjct: 338 TFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRALDPQIVGQEHYDVACEVQRILQTYKSL 397

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 398 QDIIAILG 405


>gi|170293965|gb|ACB13076.1| ATP synthase beta subunit [Mychonastes jurisii]
          Length = 366

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + +   S+ I    P  ++       F+TGI+V+D+  P  
Sbjct: 19  ATLGRIFNVLGEPVDNMGPV-QNQESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 77

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 78  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 137

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    L+A+T+AEYF  +   +VL  +D+I RF  +
Sbjct: 138 EKNLADS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDANKQDVLFFVDNIFRFVQA 195

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 196 GAEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 253

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK      ++   + R+
Sbjct: 254 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGEKHYGCAQNVKKTLQRY 312

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 313 KELQDIIAILG 323


>gi|113910948|gb|ABI48206.1| ATPase beta subunit [Araucaria araucana]
          Length = 456

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 181/371 (48%), Gaps = 33/371 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ +  GQ+I++  ++        V    +   + +  G  VF  G    +   A   GR
Sbjct: 12  KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  +  +   + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 72  IFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 128

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     +     
Sbjct: 129 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQN 188

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 189 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 248

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 249 ALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 306

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E +DI
Sbjct: 307 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDI 366

Query: 390 RLIGGYRPGVD 400
             I    PG+D
Sbjct: 367 IAI----PGLD 373


>gi|294341481|emb|CAZ89898.1| ATP synthase subunit beta, sodium ion specific (Na(+)-translocating
           ATPase subunit beta) [Thiomonas sp. 3As]
          Length = 471

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 11/333 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G LV + G   ++       GR+++ LG+PID    +   +    
Sbjct: 61  VVRTIAMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPIATEE-RRS 119

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I    P   +        +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 120 IHQSAPKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 179

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
                 V    VGER RE  +F  +    N L K  +V    +E P  R    LT +T+A
Sbjct: 180 QHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMA 238

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  
Sbjct: 239 ERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQERI--TST 296

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 297 KTGSITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQID 356

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                +E      ++  ++ R++E RDI  I G
Sbjct: 357 PNVIGEEHYSTTRAVQGILQRYKELRDIIAILG 389


>gi|300313646|ref|YP_003777738.1| F0F1-type ATP synthase subunit beta [Herbaspirillum seropedicae
           SmR1]
 gi|124483594|emb|CAM32670.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
           seropedicae]
 gi|300076431|gb|ADJ65830.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
           seropedicae SmR1]
          Length = 466

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 17/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG PID    +   + +  I  K P        ++  +TGI+VID+  P  
Sbjct: 81  ATLGRIMDVLGNPIDECGPVSH-EQTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFA 139

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF--------IE 207
            G ++G+F G+G+GK+     L++  A++     V    VGER RE  +F        + 
Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMAEAKVV 198

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
           D       K  +V    +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  
Sbjct: 199 DLENPTNSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRYTLAGT 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 259 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPAT 316

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VL+R +A  G YP VDPL S SR  D      E  +   ++   + R++E 
Sbjct: 317 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGTLQRYKEL 376

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 377 RDIIAILG 384


>gi|112791362|gb|ABI21951.1| ATP synthase beta subunit [Erwinia chrysanthemi]
          Length = 344

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 149/287 (51%), Gaps = 8/287 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G 
Sbjct: 61  GRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFAKGG 119

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  
Sbjct: 120 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVS 179

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P 
Sbjct: 180 LVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 239

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  + L
Sbjct: 240 AVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTL 297

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
           +R +A  G YP VDPL S SR  D      E   V+  +  ++ R++
Sbjct: 298 SRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQ 344


>gi|260061527|ref|YP_003194607.1| F0F1 ATP synthase subunit beta [Robiginitalea biformata HTCC2501]
 gi|88785659|gb|EAR16828.1| ATP synthase subunit B [Robiginitalea biformata HTCC2501]
          Length = 502

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G   + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGNLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 208 -DYL------GDNLKK----------SVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
            D+L      G +LKK          +  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFLHSMEEGGWDLKKVDKKAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD + VL+R +AE G YP VDPL S SR L  + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDANTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +       +  L+ R++E +DI  I G
Sbjct: 388 LGKEHYDCAQRVKELLQRYKELQDIIAILG 417


>gi|295658821|ref|XP_002789970.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb01]
 gi|226282053|gb|EEH37619.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb01]
          Length = 513

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 125 LGRIMNVTGDPIDERGPI-KHSKKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 242

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 243 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 302

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 303 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 360

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E  ++ + +  ++  ++  +DI
Sbjct: 361 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDI 420

Query: 390 RLIGG 394
             I G
Sbjct: 421 IAILG 425


>gi|218441980|ref|YP_002380309.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 7424]
 gi|226740185|sp|B7KGV4|ATPB_CYAP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218174708|gb|ACK73441.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7424]
          Length = 482

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D   S+   + +  I    P   + +   K F+TGI+VID+ TP  
Sbjct: 94  STLGRIFNVLGEPVDEKGSVNVNE-TFPIHRPAPKLTDLETKPKVFETGIKVIDLLTPYR 152

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +         +   VGER RE      E IE  +  
Sbjct: 153 QGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESKVIN 212

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DN + S   +V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  
Sbjct: 213 PDNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 272

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 273 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 330

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +        E  K   ++   + R++E 
Sbjct: 331 TFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPNIVGQEHYKTARAVQSTLQRYKEL 390

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 391 QDIIAILG 398


>gi|162452720|ref|YP_001615087.1| F0F1 ATP synthase subunit beta [Sorangium cellulosum 'So ce 56']
 gi|189081348|sp|A9F3R4|ATPB_SORC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161163302|emb|CAN94607.1| H(+)-transporting two-sector ATPase [Sorangium cellulosum 'So ce
           56']
          Length = 474

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 166/317 (52%), Gaps = 16/317 (5%)

Query: 91  GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G+  + P    C GR++N +G PID    +    ++  I  + PP + +    + F+TGI
Sbjct: 78  GKPIMVPVGNECLGRILNVVGVPIDEAGPVHAKKVA-PIHREPPPFIEQSTKVEVFETGI 136

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----V 202
           +VID+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE     
Sbjct: 137 KVIDLIAPYRKGGKIGLFGGAGVGKTVLILELINNVAKAHGGVSVFAGVGERTREGNDLF 196

Query: 203 REFIEDYLGDN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDS 258
            E  E  L D    + K+ ++    +E P  R    L+A+ +AE+F   +G +VLL +D+
Sbjct: 197 LEMSESKLADGSPVISKAALIYGQMNEPPGARSRVALSALAVAEHFRDEEGQDVLLFVDN 256

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+    ERI  +   KG++T+V ++ V  D
Sbjct: 257 IFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGAFQERI--TSTTKGSVTSVQAIYVPAD 314

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377
           +  DP   +  + LD   VL+R+++E G YP VDPL S S + D     ++   V+  + 
Sbjct: 315 DLTDPAPATAFAHLDATTVLSRAISELGIYPAVDPLDSNSTMLDPQIVGEKHYSVARRVQ 374

Query: 378 HLIHRFEETRDIRLIGG 394
             + R+++ +DI  I G
Sbjct: 375 QTLQRYKDLQDIIAILG 391


>gi|150006935|ref|YP_001301678.1| F0F1 ATP synthase subunit beta [Parabacteroides distasonis ATCC
           8503]
 gi|255016043|ref|ZP_05288169.1| F0F1 ATP synthase subunit beta [Bacteroides sp. 2_1_7]
 gi|298377360|ref|ZP_06987313.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_19]
 gi|166201723|sp|A6L8P2|ATPB_PARD8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149935359|gb|ABR42056.1| ATP synthase beta chain [Parabacteroides distasonis ATCC 8503]
 gi|298265774|gb|EFI07434.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_19]
          Length = 505

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PIDG   L K D ++ I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 94  GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +++ F   + + VGER RE    +RE I+  +   
Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     +V    +E P  R    L+ +TIAE F  K 
Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +K
Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
               E       +  ++ R +E +DI
Sbjct: 389 IVGKEHYDTAQRVKQILQRNKELQDI 414


>gi|25144756|ref|NP_498111.2| ATP synthase subunit family member (atp-2) [Caenorhabditis elegans]
 gi|21431750|sp|P46561|ATPB_CAEEL RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|17976515|gb|AAA19068.2| Atp synthase subunit protein 2 [Caenorhabditis elegans]
          Length = 538

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 18/273 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +   + +  I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 151 GRIMNVIGEPIDERGPIASKNFAA-IHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGG 209

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE    D  
Sbjct: 210 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 268

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           G N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 269 GKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 327

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 328 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 385

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + LD   VL+R +AE   YP VDPL S SR+ D
Sbjct: 386 AHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 418


>gi|319940677|ref|ZP_08015019.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B]
 gi|319805828|gb|EFW02595.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B]
          Length = 467

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 169/335 (50%), Gaps = 15/335 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +  G  V   GR   +       GR+++ LG+PID    +G  ++   
Sbjct: 57  VVRTIAMGTSEGLRRGMKVETTGREISVPVGPKTLGRIMDVLGRPIDDCGPIGSEEI--R 114

Query: 128 IMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182
            +  V P  +         +TGI+VID+  P   G ++G+F G+G+GK+     L++  A
Sbjct: 115 PIHNVAPKFDELSPSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIA 174

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVT 240
           +      V    VGER RE  +F  + +G++  L K  +V    +E P  R    LT +T
Sbjct: 175 KQYGGYSVFAG-VGERTREGNDFYHE-MGESKVLDKVAMVFGQMNEPPGNRLRVALTGLT 232

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G ++LL +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +
Sbjct: 233 MAEAFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--A 290

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR 
Sbjct: 291 STKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQ 350

Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            D      E   V+  +   + R++E RDI  I G
Sbjct: 351 VDPNIIGLEHYTVARRVQETLQRYKELRDIIAILG 385


>gi|11559336|dbj|BAB18826.1| ATP synthase beta-subunit [Volvulina steinii]
          Length = 376

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    + ++ I    P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGNVFFEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 148 EKNLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|190358726|sp|A8F2U0|ATPB_RICM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 473

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 80  RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQVLQTYKSLQDIIAILG 391


>gi|315924554|ref|ZP_07920773.1| V-type ATP synthase, subunit B [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622084|gb|EFV02046.1| V-type ATP synthase, subunit B [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 464

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 15/326 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           + Q      +G+V+ I+ D  +V +     G +I      F      +  S    GRV +
Sbjct: 32  IKQANGEKRIGRVLEIDGDAALVQLFETSQGLKIFDAKATFQGHGIELGVSRDMLGRVFD 91

Query: 108 ALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
            +G+P D G D + +  L +      P A  R    +  +TGI  ID    L  GQ++ V
Sbjct: 92  GMGRPKDDGPDIIAEKRLDINGAPMNPVA--RDYPAEFIQTGISAIDGLNTLVRGQKLPV 149

Query: 167 FAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           F+GSG+  + L +  AR       S+ F  V+ + +G    E   FI+D+     ++++V
Sbjct: 150 FSGSGLPHAQLAAQIARQAKVLDNSEDF-AVVFAAIGITFEEADYFIKDFRKTGAIERAV 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           + +  +++  + R   P  A+T AEY + + G +VL+IL  IT +A S+RE++    E+P
Sbjct: 209 LFMNYANDPAVERIATPRMAITCAEYLAYELGMHVLVILTDITNYAESLREVSAARKEVP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             RGYP  ++++L  L ER G    +KG+IT +  + +  D+   PI D    I +G I+
Sbjct: 269 GRRGYPGYLYTDLASLYERAGRIRGKKGSITQIPILSMPEDDITHPIPDLTGYITEGQII 328

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK 363
           L+R L   G  PP+D L S+SRL DK
Sbjct: 329 LSRDLNMRGIRPPIDVLPSLSRLKDK 354


>gi|308473481|ref|XP_003098965.1| CRE-ATP-2 protein [Caenorhabditis remanei]
 gi|308267929|gb|EFP11882.1| CRE-ATP-2 protein [Caenorhabditis remanei]
          Length = 551

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 147/273 (53%), Gaps = 18/273 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 161 GRIMNVIGEPIDERGPIASKHFAA-IHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGG 219

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE    D  
Sbjct: 220 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 278

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           G N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 279 GKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 337

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 338 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 395

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + LD   VL+R +AE   YP VDPL S SR+ D
Sbjct: 396 AHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 428


>gi|257869472|ref|ZP_05649125.1| sodium-transporting two-sector ATPase [Enterococcus gallinarum EG2]
 gi|257803636|gb|EEV32458.1| sodium-transporting two-sector ATPase [Enterococcus gallinarum EG2]
          Length = 466

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 13/343 (3%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I  D  +V I     G  +    + F      +  S    GRV + LG+  DG  
Sbjct: 42  GQVLEIQEDKALVQIFEGTGGINLRESSVRFLGHPLELGVSEEMIGRVFDGLGRVKDGGS 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  M+I  +V   M R   ++  +TGI  ID    L  GQ++ +F+GSG+    L
Sbjct: 102 EI-FAEKRMDINGEVINPMARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160

Query: 178 LSMFARS----DCFD--KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            S  AR     D  D   V+ + +G    E   F+ED+     + +SVV +  +++  I 
Sbjct: 161 ASQIARQAQVLDTEDDFAVVFAGIGITFEEAEYFMEDFRQTGAIDRSVVFMNLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP  +++ 
Sbjct: 221 RIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G     KG++T +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSTLYERAGRLRGVKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKNGIQP 340

Query: 350 PVDPLASVSRLADKAWSADE--KKLVSSLTHLIHRFEETRDIR 390
           P+D L S+SRL DK     +  K   S++  L   + + +  +
Sbjct: 341 PIDVLPSLSRLKDKGTGEGKTRKDHASTMNQLFSAYAQGKQAK 383


>gi|226287911|gb|EEH43424.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb18]
          Length = 513

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 125 LGRIMNVTGDPIDERGPI-KHSKKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 242

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 243 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 302

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 303 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 360

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E  ++ + +  ++  ++  +DI
Sbjct: 361 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDI 420

Query: 390 RLIGG 394
             I G
Sbjct: 421 IAILG 425


>gi|183206684|gb|ACC54540.1| ATP synthase beta subunit [Campanula herminii]
          Length = 465

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 198 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIITILG 387


>gi|119221374|gb|ABL61892.1| ATP synthase beta-subunit [Cylindrocapsa geminella]
          Length = 395

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 26/310 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   ++ I    PP ++       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGEPVD---NLGPVETQETLPIHRTAPPFVDLDTRLSIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 155

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             L D+  K  +V    ++ P  R    LTA+T+ EYF      +VL  +D+I RF  + 
Sbjct: 156 KNLSDS--KVALVYGQMNDPPGARMRVALTALTMGEYFRDINKQDVLFFIDNIFRFVQAG 213

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 214 AEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 271

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R+LA +G YP V PL S S +  + W   EK      S+  ++ R++
Sbjct: 272 TTFAHLDATTVLSRALASKGIYPAVSPLESTSTML-QPWIVGEKHYDCARSVQSILQRYK 330

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 331 ELQDIIAILG 340


>gi|4519334|dbj|BAA75582.1| ATP synthase beta-subunit [Volvulina compacta]
          Length = 376

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVLVEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|183206680|gb|ACC54538.1| ATP synthase beta subunit [Campanula hawkinsiana]
          Length = 463

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 198 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIITILG 387


>gi|119350563|gb|ABL63232.1| AtpB [Trochiscia hystrix]
          Length = 392

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   + ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 38  LGRIFNVLGEPVDNMGPVETQE-TLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 96

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 97  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 157 NLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 214

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   EK      ++   + R++E
Sbjct: 273 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDGAQNVKKTLQRYKE 331

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 332 LQDIIAILG 340


>gi|239946819|ref|ZP_04698572.1| ATP synthase F1, beta subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241068666|ref|XP_002408502.1| ATP synthase subunit alpha, sodium ion specific, putative [Ixodes
           scapularis]
 gi|215492490|gb|EEC02131.1| ATP synthase subunit alpha, sodium ion specific, putative [Ixodes
           scapularis]
 gi|239921095|gb|EER21119.1| ATP synthase F1, beta subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 474

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E+    TGI
Sbjct: 80  RIPVGTEALGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGD---NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +     NL+     K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVINLEEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQVLQTYKSLQDIIAILG 391


>gi|146271663|emb|CAL25313.1| atpD beta synthase chain [Pseudomonas umsongensis]
          Length = 284

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 146/286 (51%), Gaps = 8/286 (2%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG PID    +   D    I    P    +       +TGI+VID+  P   G ++G+F 
Sbjct: 1   LGNPIDEAGPIAT-DERWGIHRAAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFG 59

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224
           G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  +V    
Sbjct: 60  GAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQM 119

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +E P  R    LT +T+AE F  +G++VLL +D+I R+  +  E++   G +P A GY  
Sbjct: 120 NEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQP 179

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  +VL+R +A 
Sbjct: 180 TLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAS 237

Query: 345 EGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            G YP VDPL S SR  D      D       + +++ R++E +DI
Sbjct: 238 LGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQYVLQRYKELKDI 283


>gi|262384322|ref|ZP_06077457.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_33B]
 gi|262294025|gb|EEY81958.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_33B]
          Length = 505

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PIDG   L K D ++ I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 94  GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +++ F   + + VGER RE    +RE I+  +   
Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     +V    +E P  R    L+ +TIAE F  K 
Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +K
Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
               E       +  ++ R +E +DI
Sbjct: 389 IVGKEHYDTAQRVKQILQRNKELQDI 414


>gi|183206546|gb|ACC54471.1| ATP synthase beta subunit [Campanula alliariifolia]
          Length = 487

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGSTLGR 98

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 99  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 155

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 214

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 215 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 274

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 275 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 332

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 333 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 392

Query: 389 IRLIGG 394
           I  I G
Sbjct: 393 IITILG 398


>gi|207722132|ref|YP_002252570.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2]
 gi|206587307|emb|CAQ17891.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2]
          Length = 469

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I  K P            +TGI+VID+  P   G 
Sbjct: 94  GRIMDVLGRPIDEAGPIA-CDEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 152

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 212 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 271

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D      E  ++   +   + R++E RDI  I G
Sbjct: 330 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILG 387


>gi|310798044|gb|EFQ32937.1| ATP synthase F1 [Glomerella graminicola M1.001]
          Length = 517

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K    + I ++ P  +++    +   TGI+V+D+  P   G
Sbjct: 129 LGRIMNVTGDPIDERGPI-KSSKRLPIHTEPPEFIDQSTTAEVLVTGIKVVDLLAPYARG 187

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 188 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQL 246

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 247 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 306

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 307 ALLGRIPSAVGYQPTLAIDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 364

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 365 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQDHYDTATRVQQILQEYKSLQDI 424

Query: 390 RLIGG 394
             I G
Sbjct: 425 IAILG 429


>gi|308274427|emb|CBX31026.1| ATP synthase subunit beta 1 [uncultured Desulfobacterium sp.]
          Length = 464

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 160/332 (48%), Gaps = 10/332 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           INL  V    +     +S GD V   GR   +   A   GR+ N  G PID   +L +  
Sbjct: 54  INLKTVRCIAITQARGLSRGDRVLDTGRPISVPVGADLLGRMFNVFGDPIDKKGALKQYK 113

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFA 182
           L   I  K      R    + F TGI++ID+  PL  G + G+F G+G+GK+ L + M  
Sbjct: 114 LR-SIHKKSVSISERTTNTEIFHTGIKIIDLLAPLEKGGKAGLFGGAGVGKTVLIMEMIH 172

Query: 183 RSDCFDKVIISL--VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
                 K I     +GER RE  E   +      L ++V+V    +E P  R +   TA+
Sbjct: 173 NMASVHKGISVFCGIGERSREGEELYREINEVGVLDRAVLVFGQMNEQPGARFLVGHTAL 232

Query: 240 TIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +  +VL+++D+I RF  +  E++   G +P   GY  ++ +EL  L ERI 
Sbjct: 233 TMAEYFRDDEHRDVLMLIDNIFRFVQAGSEVSGLIGRIPSRVGYQPTLATELAELEERI- 291

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               + G IT++ +V V  D+  DP A      +   IVL+R +  +G YP VDPL S S
Sbjct: 292 -CSTKAGAITSIQAVYVPADDFTDPAAVHTFGHMSSSIVLSRKMTTQGLYPSVDPLQSRS 350

Query: 359 RLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           ++     + +       ++   +  +E+ +DI
Sbjct: 351 KMLTPGIAGERHYNTARAVRQTLAEYEDLKDI 382


>gi|183206650|gb|ACC54523.1| ATP synthase beta subunit [Adenophora divaricata]
          Length = 470

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGXVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 202

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 203 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 262

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 263 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 320

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 321 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 380

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 381 YKELQDIITILG 392


>gi|149278595|ref|ZP_01884731.1| F0F1 ATP synthase subunit beta [Pedobacter sp. BAL39]
 gi|149230590|gb|EDM35973.1| F0F1 ATP synthase subunit beta [Pedobacter sp. BAL39]
          Length = 501

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 177/362 (48%), Gaps = 57/362 (15%)

Query: 103 GRVINALGKPIDG----DDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
           GR+ N +G+ IDG    D++ G+       +   PP  +    E     TGI+VID+  P
Sbjct: 89  GRLFNVVGEAIDGINKVDNANGRP------IHNAPPRFDELSTESEVLFTGIKVIDLLEP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE--- 207
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE    +REFIE   
Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIMELVNNIAKAYAGLSVFAGVGERTREGNDLLREFIESGV 202

Query: 208 -----DYL--------------GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYF- 245
                D+L               + LK  K+ +V    +E P  R    L+ +T+AEYF 
Sbjct: 203 INYGEDFLHSMEKGGWDLSKVDTEKLKDSKATLVFGQMNEPPGARARVALSGLTVAEYFR 262

Query: 246 ----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                  G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  + 
Sbjct: 263 DGDGEGAGKDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TS 320

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ 
Sbjct: 321 TKRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKISELGIYPAVDPLDSTSRIL 380

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFL 417
             A   DE       +  ++ R++E +DI  I     G+D + ++    VH+   +  FL
Sbjct: 381 SPAILGDEHYNTAQRVKEILQRYKELQDIIAI----LGMDELSEEDKLVVHRARRVQRFL 436

Query: 418 KQ 419
            Q
Sbjct: 437 SQ 438


>gi|91178122|gb|ABE27296.1| mitochondrial F-ATPase beta subunit [Pichia fermentans]
          Length = 337

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 26/310 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR++N  G P+D      +G +  +    +   PPA   Q  E +  +TGI+V+D+  P
Sbjct: 19  LGRILNVTGDPVDE-----RGPVXCKERRPIHQDPPAFVDQSTEAEVLETGIKVVDLLAP 73

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  
Sbjct: 74  YARGGKIGLFGGAGVGKTVFIQELINNVAKAHGGFSVFTG-VGERTREGNDLYREMKETG 132

Query: 210 LGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           +  NL+   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +
Sbjct: 133 V-INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQA 191

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP  
Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SRL D A    E   V++ +   +  ++
Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYTVATQVQETLQAYK 309

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 310 SLQDIIAILG 319


>gi|3913123|sp|O50341|ATPB_FERIS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2687832|emb|CAA75783.1| F1F0-ATPase beta subunit [Fervidobacterium islandicum]
          Length = 472

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 165/300 (55%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N +G+PID    L   D+    + +  P+M  Q+ E +  +TG++VID+  P   
Sbjct: 90  LGRMFNVIGEPIDEQGELK--DIEYWPIHRPAPSMTEQKTEIEILETGLKVIDLLAPFPK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG F G+G+GK+ L+    R+   +     I + VGER RE  + ++E      L  
Sbjct: 148 GGKIGFFGGAGVGKTVLVMEMIRNIAIEHHGFSIFAGVGERTREGNDLYLEMTEAGVLNN 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R    LTA+TIAEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TVLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLSTDMGELQERI--TSTKKGSITSVQAIYVPADDITDPAPATTFTHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           IVL+R LA  G YP VDPL S S++ D      E  ++   +  ++ R+++ +DI  I G
Sbjct: 326 IVLSRQLAALGLYPAVDPLDSTSKILDPNIVGKEHYEVARGVQEVLQRYKDLQDIIAILG 385


>gi|282857664|ref|ZP_06266878.1| V-type sodium ATP synthase, B subunit [Pyramidobacter piscolens
           W5455]
 gi|282584514|gb|EFB89868.1| V-type sodium ATP synthase, B subunit [Pyramidobacter piscolens
           W5455]
          Length = 470

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 167/333 (50%), Gaps = 19/333 (5%)

Query: 78  GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAM 136
           G ++    + F      +  S    GRV N  G PIDG   +  + ++ +  ++  P   
Sbjct: 64  GLDVDTASVTFLGKSLELPVSEDMLGRVFNGRGDPIDGGAPIIAEKNIDVNGLAMNP--Y 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--------SDCFD 188
           +R   ++  +TGI  ID   P+  GQ++ +F+ SG+  + + +  AR        S+ F 
Sbjct: 122 SRDYPDEFIQTGISTIDGMNPMVRGQKLPIFSASGLPHNRMAAQLARQANVIGGGSEKF- 180

Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS- 246
            V+ + +G    E   F+ED+     L ++V+ +  +++  + R   P  A+T AEY + 
Sbjct: 181 AVVFAAMGITFEEAAFFMEDFRKTGALDRTVMYINLANDPAVERIYTPKLALTAAEYLAF 240

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            K  +VL+IL  +T +  ++REI+    E+P  RGYP  ++++L  + ER G  +   G+
Sbjct: 241 EKNMHVLVILTDLTNYCEALREISAARKEVPGRRGYPGYLYTDLATMYERAGRVKGSTGS 300

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-- 364
           IT V  + +  D+   PI D    I +G I+L+R+L   G YPPVD + S+SRL DK   
Sbjct: 301 ITQVPILTMPEDDKTHPIPDLTGYITEGQIILSRNLHRTGIYPPVDVMPSLSRLKDKGIG 360

Query: 365 ---WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
                 D   L++ L     R +E +++ +I G
Sbjct: 361 EGKTREDHADLMNQLFAAYARGKEAKELAVILG 393


>gi|256810421|ref|YP_003127790.1| ATP synthase, B subunit [Methanocaldococcus fervens AG86]
 gi|256793621|gb|ACV24290.1| ATP synthase, B subunit [Methanocaldococcus fervens AG86]
          Length = 464

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 165/332 (49%), Gaps = 16/332 (4%)

Query: 59  LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           +GQV+  R  L +V +     G   +   + F     +I  S    GR+ N  G PIDG 
Sbjct: 45  MGQVLEAREGLAVVQVFEGTTGLNTNQTKVRFTGKTAKIGVSMEMLGRIFNGRGVPIDGG 104

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  ++I       ++R+      +TGI  ID    L  GQ++ +F+GSG+  + 
Sbjct: 105 PEIVP-EKELDINGYPLNPISRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 163

Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR            V+ + +G    E   F+E++     L+++VV +  +++  I
Sbjct: 164 LAAQIARQAKVRGEGEKFAVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLANDPAI 223

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P  A+T+AEY + + D +VL+IL  +T +  ++REI+    E+P  RGYP  +++
Sbjct: 224 ERILTPRIALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMYT 283

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G  +   G IT +  + +  D+   PI D    I +G IVL+R L  +G Y
Sbjct: 284 DLATLYERAGRVKGRVGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 343

Query: 349 PPVDPLASVSRLADKAWS-----ADEKKLVSS 375
           PPVD L S+SRLA           D KK+++ 
Sbjct: 344 PPVDVLPSLSRLAGNGQGEGKTREDHKKVINQ 375


>gi|123969172|ref|YP_001010030.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str.
           AS9601]
 gi|166201727|sp|A2BT12|ATPB_PROMS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123199282|gb|ABM70923.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. AS9601]
          Length = 486

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVNTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|82793401|ref|XP_728025.1| ATP synthase F1subunit beta [Plasmodium yoelii yoelii str. 17XNL]
 gi|23484166|gb|EAA19590.1| ATP synthase F1, beta subunit [Plasmodium yoelii yoelii]
          Length = 533

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 31/316 (9%)

Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLC 159
           GR++N +G+PID  GD    K    +  + + PP    Q  E     TGI+V+D+  P  
Sbjct: 140 GRIMNVIGEPIDECGDIKSKK----LLPIHRDPPLFTDQSTEPALLITGIKVVDLIAPYA 195

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK T+L M   ++   K     + + VGER RE  +   + L   + 
Sbjct: 196 KGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMLTTGVI 254

Query: 215 --------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
                          K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+I
Sbjct: 255 KKKKIKDNEYDFSGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFVDNI 314

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+
Sbjct: 315 YRFTQAGSEVSALLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADD 372

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
             DP   +  S LD   VL+RS+AE G YP VDPL S SR L       ++ ++  ++  
Sbjct: 373 LTDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGIEQYEVARNIQQ 432

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 433 ILQDYKSLQDIIAILG 448


>gi|157414039|ref|YP_001484905.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9215]
 gi|254525571|ref|ZP_05137623.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9202]
 gi|166990371|sp|A8G6T8|ATPB_PROM2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157388614|gb|ABV51319.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9215]
 gi|221536995|gb|EEE39448.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9202]
          Length = 486

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVNTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|126696966|ref|YP_001091852.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9301]
 gi|166201724|sp|A3PES6|ATPB_PROM0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|126544009|gb|ABO18251.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9301]
          Length = 486

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVNTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|33861994|ref|NP_893555.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|81835551|sp|Q7V049|ATPB_PROMP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33640362|emb|CAE19897.1| H+-transporting ATP synthase beta subunit [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 486

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D++  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVNTSDIA-PIHRSAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLSQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R LA +G YP VDPL S S +   +   DE  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARGLAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|23503591|dbj|BAC20392.1| ATP synthase beta-subunit [Pediastrum duplex]
          Length = 376

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 160/313 (51%), Gaps = 30/313 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM----NRQRVEKGFKTGIRVIDIFTP 157
            GR+ N LG+P+D    + K + ++ I  + PPA      R  +   F+TGI+V+D+  P
Sbjct: 31  LGRIFNVLGEPVDNMGPV-KNEETLPI-HRTPPAFVDLDTRLSI---FETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 86  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGV 145

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 146 IVEKNLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIH 381
              +  + LD   VL+R LA +G YP V PL S S +  + W   EK      S+   + 
Sbjct: 262 APATTFAHLDATTVLSRDLAAKGIYPAVSPLESTSTML-QPWILGEKHYDCAQSVKRTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 321 RYKELQDIIAILG 333


>gi|217076683|ref|YP_002334399.1| F0F1 ATP synthase subunit beta [Thermosipho africanus TCF52B]
 gi|226740685|sp|B7IG44|ATPB_THEAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|217036536|gb|ACJ75058.1| ATP synthase F1, beta subunit [Thermosipho africanus TCF52B]
          Length = 470

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 10/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N +G+PIDG +   K D+    + K PP++  Q    +  +TGI+VID+  P   
Sbjct: 90  LGRMFNVIGEPIDGKEDEIK-DVEYWPIHKAPPSITEQSTSVEILETGIKVIDLLAPFPK 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216
           G +IG F G+G+GK+ L+    R+   +    S+   VGER RE  E   D    + L  
Sbjct: 149 GGKIGFFGGAGVGKTVLVMELIRNIAIEHHGFSMFAGVGERTREGNELYLDMQEAEVLDN 208

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R    LTA+T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 209 TVLVFGQMNEPPGARFRVALTALTMAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 268

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 269 MPSAVGYQPTLATDMGELQERI--TSTKKGSITSVQAIYVPADDITDPAPATTFTHLDAT 326

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R  A  G YP VDPL S S++ D      E  ++   +  ++ R+++ +DI  I G
Sbjct: 327 VVLSRRRAALGLYPAVDPLDSTSKMLDPNIIGQEHYEVARGVQEILQRYKDLQDIIAILG 386


>gi|156972756|ref|YP_001443663.1| F0F1 ATP synthase subunit beta [Vibrio harveyi ATCC BAA-1116]
 gi|190358215|sp|A7N0Y1|ATPB1_VIBHB RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|156524350|gb|ABU69436.1| hypothetical protein VIBHAR_00421 [Vibrio harveyi ATCC BAA-1116]
          Length = 467

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  ++    + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +    
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR  D      D       +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDTARGVQQTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|4519276|dbj|BAA75553.1| ATP synthase beta-subunit [Volvox dissipatrix]
          Length = 376

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVIVEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|149173275|ref|ZP_01851906.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797]
 gi|148848081|gb|EDL62413.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797]
          Length = 483

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 175/333 (52%), Gaps = 23/333 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG P+DG   +   D    I  K P   N     + F+TGI+V+D+ TP   G 
Sbjct: 99  GRVFNLLGDPVDGRGEVST-DERWPIHRKPPLLENLSAKTELFETGIKVVDLLTPFVRGG 157

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213
           + G+F G+G+GK+ +L+ + AR  S      + + VGER RE      E  E  +G    
Sbjct: 158 KAGLFGGAGLGKTVILTELIARIASAHGGYSVFAGVGERTREGNDLWLEMQETKIGQTDR 217

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             ++++ +V    +E P  R    L+A+T+AE+F  + G + LL +D+I RF+ +  E++
Sbjct: 218 SVIEQTCMVFGQMNEPPGARLRVALSALTMAEWFRDTTGTDTLLFVDNIFRFSQAGSEVS 277

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +EL  L ERI  +  + G IT+V +V V  D+  DP   +  S
Sbjct: 278 ALLGRMPSAVGYQPTLGTELGELQERI--TSTKNGAITSVQAVYVPADDPTDPAPATAFS 335

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  I L R ++E+G YP +DPLAS SR+ D  +  +   ++   +   + R+ E +DI
Sbjct: 336 HLDAFIYLERKISEKGIYPAIDPLASSSRILDPQYVGERHYRVAREVQQTLQRYRELQDI 395

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     GVD + ++    VH+   I  FL Q
Sbjct: 396 IAI----LGVDELSEEDKLIVHRARRIERFLSQ 424


>gi|187479684|ref|YP_787709.1| F0F1 ATP synthase subunit beta [Bordetella avium 197N]
 gi|118573510|sp|Q2KU36|ATPB_BORA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115424271|emb|CAJ50824.1| ATP synthase beta chain [Bordetella avium 197N]
          Length = 466

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I    P         +  +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEAGPI-NADEKRAIHQHAPKFDELSPSVELLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E  ++   +   + R++E RDI  I G
Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILG 384


>gi|329114830|ref|ZP_08243587.1| ATP synthase subunit beta [Acetobacter pomorum DM001]
 gi|326695961|gb|EGE47645.1| ATP synthase subunit beta [Acetobacter pomorum DM001]
          Length = 490

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 19/308 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +     +  I  + P   ++    +   TGI+V+D+  P   G 
Sbjct: 101 GRILNVIGEPIDEKGPIPTSRRA-PIHRQAPSFEDQAAASEILMTGIKVVDLLCPYLKGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212
           +IG+F G+G+GK+ ++     +       +S+   VGER RE  +   +        LG+
Sbjct: 160 KIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKLGE 219

Query: 213 NLK----KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
           N      K  +V    +E P  R    LT +T+AEYF   +  +VL  +D+I RF  +  
Sbjct: 220 NGSTEGSKVALVFGQMNEPPGARARVALTGLTLAEYFRDEENQDVLFFVDNIFRFTQAGS 279

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +
Sbjct: 280 EVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAA 337

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD   VLNRS+AE G YP VDPL S SR  D      E   V+  +  ++  ++  
Sbjct: 338 TFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRALDPQIVGQEHYDVACEVQRILQTYKSL 397

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 398 QDIIAILG 405


>gi|183206666|gb|ACC54531.1| ATP synthase beta subunit [Campanula elatines]
          Length = 488

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|318610455|dbj|BAJ61697.1| ATP synthase beta-subunit [Volvulina compacta]
          Length = 403

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 40  LGRIFNVLGEPVDNMGNVLVEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 98

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 99  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 158

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 159 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|260774962|ref|ZP_05883862.1| ATP synthase beta chain [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609052|gb|EEX35211.1| ATP synthase beta chain [Vibrio coralliilyticus ATCC BAA-450]
          Length = 467

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + +  I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLKK 216
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    N++K
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEK 204

Query: 217 S-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
                  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   +  ++   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARNVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|300726965|ref|ZP_07060388.1| ATP synthase F1, beta subunit [Prevotella bryantii B14]
 gi|299775750|gb|EFI72337.1| ATP synthase F1, beta subunit [Prevotella bryantii B14]
          Length = 508

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG  +L   + S  I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 95  GRMLNVIGQPIDGMSNLNM-EGSYPIHREAPKFEDLSTHKEMLATGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D +       G+
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVIKYGE 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG-- 249
             +K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFRKAMDEGKWDLSLVDPEELKKSQATLVYGQMNEPPGARSAVALSGLTVAEEFRDHGGA 273

Query: 250 ----DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+ ++ ERI  +  + G
Sbjct: 274 NGEASDIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGQMQERI--TSTKNG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPLAS SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKIAELGIYPAVDPLASTSRILDPLI 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              E  +    +  L+  + E +DI  I G
Sbjct: 392 VGKEHYECAQRVKELLQHYNELQDIIAILG 421


>gi|119479209|ref|XP_001259633.1| ATP synthase F1, beta subunit, putative [Neosartorya fischeri NRRL
           181]
 gi|119407787|gb|EAW17736.1| ATP synthase F1, beta subunit, putative [Neosartorya fischeri NRRL
           181]
          Length = 519

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 158/313 (50%), Gaps = 16/313 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I       GR++N  G PID    + K      I ++ P  + +    +   TGI+V+D
Sbjct: 122 KIPVGPATLGRIVNVTGDPIDERGPI-KATKFAPIHAEAPEFIEQSTSAEILVTGIKVVD 180

Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           +  P   G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   + 
Sbjct: 181 LLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEM 239

Query: 210 LGDNL------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
               +       K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF
Sbjct: 240 QETGVIQLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRF 299

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  D
Sbjct: 300 TQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTD 357

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIH 381
           P   +  + LD   VL+R ++E G YP VDPL S SR+ D     +E   V++ +  ++ 
Sbjct: 358 PAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYAVATRVQQMLQ 417

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 418 EYKSLQDIIAILG 430


>gi|584810|sp|Q08807|ATPB_GALSU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|396525|emb|CAA47241.1| H(+)-transporting ATP synthase [Cyanidium caldarium]
          Length = 476

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           C  GR+ N LG+P+D   ++   D  + I    P     +     F+TGI+VID+  P  
Sbjct: 88  CTLGRIFNVLGEPVDELGAIST-DRKLPIHRASPLFTQLETKPSIFETGIKVIDLLAPYK 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVGERTREGNDLYVEMKESKVIN 206

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
             NL++S V  V    +E P  R    LTA+T+AEYF  +   +VLL +D+I RF  +  
Sbjct: 207 EKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDNNKQDVLLFIDNIFRFVQAGS 266

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 267 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 324

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       DE  + +  +   + R++E 
Sbjct: 325 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPQIVGDEHYVTAQRVKENLQRYKEL 384

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 385 QDIIAILG 392


>gi|170293981|gb|ACB13084.1| ATP synthase beta subunit [Raphidonema nivale]
          Length = 366

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 161/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D    + I    P  ++       F+TGI+V+D+  P
Sbjct: 19  ATLGRIFNVLGEPVD---NLGPVDAKEGLPIHRSAPLFVDLDTKLSIFETGIKVVDLLAP 75

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  ARS     V    VGER RE  +   +     
Sbjct: 76  YRRGGKIGLFGGAGVGKTVLIMELINNIARSHGGVSVFAG-VGERTREGNDLYMEMKESK 134

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 135 VINEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 194

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 195 AGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPA 252

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R
Sbjct: 253 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKETLQR 311

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 312 YKELQDIIAILG 323


>gi|116787106|gb|ABK24378.1| unknown [Picea sitchensis]
          Length = 568

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 27/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N +G+ ID      KGDL+    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 174 ATLGRIMNVIGEAIDH-----KGDLTTDHYLPIHREAPSFVEQSTEQEILVTGIKVVDLL 228

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE
Sbjct: 229 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 287

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LG+   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I R
Sbjct: 288 SGVIKLGEKQGESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 347

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 348 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 405

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++
Sbjct: 406 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVL 465

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 466 QNYKNLQDIIAILG 479


>gi|18073050|emb|CAC88857.1| atpD beta synthase chain [Azorhizophilus paspali]
          Length = 349

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 140/264 (53%), Gaps = 7/264 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG PID    +G+ +    I    P    +    +  +TGI+VID+  P   G 
Sbjct: 66  GRIMDVLGNPIDEAGPIGE-EERWTIHRAAPSYAEQAGGNELLETGIKVIDLVCPFAKGG 124

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  
Sbjct: 125 KVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVA 184

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P 
Sbjct: 185 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 244

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 245 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVL 302

Query: 339 NRSLAEEGRYPPVDPLASVSRLAD 362
           +R +A  G YP VDPL S SR  D
Sbjct: 303 SRDIASLGIYPAVDPLDSTSRQLD 326


>gi|146271655|emb|CAL25309.1| atpD beta synthase chain [Pseudomonas moorei]
          Length = 284

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 137/250 (54%), Gaps = 7/250 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 36  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 95

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 96  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 155

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 156 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 213

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      D  +    + ++
Sbjct: 214 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNDHYETARGVQYV 273

Query: 380 IHRFEETRDI 389
           + R++E +DI
Sbjct: 274 LQRYKELKDI 283


>gi|145596142|ref|YP_001160439.1| F0F1 ATP synthase subunit beta [Salinispora tropica CNB-440]
 gi|189081343|sp|A4XAW2|ATPB_SALTO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145305479|gb|ABP56061.1| ATP synthase F1, beta subunit [Salinispora tropica CNB-440]
          Length = 486

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%)

Query: 103 GRVINALGK--PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           G V NA+G+   ++  ++L   D   +I  K P   + +   +  +TGI+VID+  P   
Sbjct: 105 GHVFNAIGECLNLEPGETLSPDD-HWQIHRKAPAFADLEPKTEMLETGIKVIDLLAPYVK 163

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +      + K
Sbjct: 164 GGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTESGVIDK 223

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L+A+T+AEYF   +   VLL +D+I RF  +  E++T  G 
Sbjct: 224 TALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNIFRFTQAGSEVSTLLGR 283

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI     +   IT++ ++ V  D++ DP   +  + LD  
Sbjct: 284 MPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADDYTDPAPATTFAHLDAT 341

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
             L RS++++G YP VDPLAS SR+    +   E   V++ +  ++ R+++ +DI  I G
Sbjct: 342 TNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFTVATEVKRILQRYKDLQDIIAILG 401


>gi|19033087|gb|AAL83528.1|AF408800_1 ATP synthase beta subunit [Mougeotia sp. UTEX LB 758]
          Length = 402

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG      ++ I    P           F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---NLGPVNNKTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-------- 206
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYIEMKESKV 154

Query: 207 --EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
             E+ +G++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 155 INEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFV 212

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 213 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 270

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W    +  ++  ++   + 
Sbjct: 271 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGTEHYEIAQAVKETLQ 329

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 330 RYKELQDIIAILG 342


>gi|183206676|gb|ACC54536.1| ATP synthase beta subunit [Campanula rotundifolia]
          Length = 477

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 199 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|89070092|ref|ZP_01157422.1| ATP synthase subunit B [Oceanicola granulosus HTCC2516]
 gi|89044313|gb|EAR50456.1| ATP synthase subunit B [Oceanicola granulosus HTCC2516]
          Length = 474

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +   D    I +  P    +    +   TGI+V+D+  P  
Sbjct: 84  ATLGRILNVVGEPVDEKGPI-SADERRPIHAPAPDFAQQSTEAEILVTGIKVVDLLAPYS 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGFSVFAGVGERTREGNDLYYEMIEGGV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL++S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 INPDNLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +    G+IT+V ++ V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTRSGSITSVQAIYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD    LNR+++E G YP VDPL S SRL D     +E  ++   +  ++ R++
Sbjct: 319 ATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRLMDPQIVGEEHYQVARDVQGILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|297692195|ref|XP_002823453.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit beta,
           mitochondrial-like [Pongo abelii]
          Length = 578

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 163/311 (52%), Gaps = 22/311 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR---QRVEKGF-KTGIRVIDIFTP 157
            GR++N +G+PID    + K    + +++ +    +R     VE+ F  TGI+V+D+  P
Sbjct: 185 LGRIMNVIGEPIDERGPI-KTKQXVALIASMHKGTSRFMEMSVEQEFLVTGIKVVDLLAP 243

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIE------ 207
              G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  + +       
Sbjct: 244 YAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLLPXNDXIL 302

Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                 D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  
Sbjct: 303 VLSTXKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQ 362

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  ++ERI  +  +KG+IT+V ++ V  D+  DP 
Sbjct: 363 AGSEVSALLGRIPSAVGYQPTLATDMGTMMERI--TTTKKGSITSVQAIYVPADDLTDPA 420

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  +
Sbjct: 421 PATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDY 480

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 481 KSLQDIIAILG 491


>gi|269962672|ref|ZP_06177017.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
 gi|269832595|gb|EEZ86709.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
          Length = 467

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  ++    + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +  
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 203

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR  D      D       +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDTARGVQQTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|119350503|gb|ABL63202.1| AtpB [Golenkinia brevispicula]
          Length = 389

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 26/310 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   ++G  D   S+ I    P  ++       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGEPVD---NMGPVDANESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 155

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LTA+T+AE+F      +VL  +D+I RF  + 
Sbjct: 156 KNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEFFRDINKQDVLFSMDNIFRFVQAG 213

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 214 AEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 271

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   EK      S+   + R++
Sbjct: 272 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEKHYDCAQSVKKTLQRYK 330

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 331 ELQDIIAILG 340


>gi|146304666|ref|YP_001191982.1| V-type ATP synthase subunit B [Metallosphaera sedula DSM 5348]
 gi|172046940|sp|A4YI06|VATB_METS5 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|145702916|gb|ABP96058.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Metallosphaera sedula DSM 5348]
          Length = 466

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 25/331 (7%)

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG---DLSMEIMSKVPPAMNR 138
           +G  V   GR   +  S    GR+ N LG P+D    + KG   D++ E ++   PA+ R
Sbjct: 71  VGTTVRFLGRGLEVKISEEMLGRIFNPLGDPLDNGPMVIKGEKRDINGEPLN---PAI-R 126

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVII 192
              E+  +TGI  ID    L  GQ++ +F+GSG+  + L +  A+            V+ 
Sbjct: 127 DYPEEFIQTGISAIDGLNSLLRGQKLPIFSGSGLPANILAAQIAKQATVRGEESNFAVVF 186

Query: 193 SLVGERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
             +G R  E    R+F E+    N  +  ++++ ++E P+++ + P TA+T+AEY + + 
Sbjct: 187 GAIGVRYDEALFFRKFFEETGAIN--RVALIMSLANEPPVMKTLTPKTALTLAEYLAFEQ 244

Query: 250 D-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           D +VL IL  +T +  ++REI+ +  E+P   GYP  ++++L +  ER G    +KG+IT
Sbjct: 245 DMHVLAILIDMTNYCEALREISASKEEVPGRGGYPGYMYTDLAQTYERAGKVIGKKGSIT 304

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
            +  + +  D+   PI D    I +G I L+RSL  +G YPP++ L S+SRLA       
Sbjct: 305 QMPILTMPNDDITHPIPDLTGYITEGQITLDRSLYNKGIYPPINVLMSLSRLAKDGIGEG 364

Query: 368 ----DEKKLVSSLTHLIHRFEETRDIRLIGG 394
               D K L + L     +  +TR +  I G
Sbjct: 365 KTRDDHKDLSNQLFAAYAKAVDTRGLAAIIG 395


>gi|38233646|ref|NP_939413.1| F0F1 ATP synthase subunit beta [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564886|sp|Q6NHS9|ATPB_CORDI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|38199906|emb|CAE49572.1| ATP synthase beta chain [Corynebacterium diphtheriae]
          Length = 481

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +  LG+      I    PP    +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD    
Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSIKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           L+R++A +G YP V+PL S SR+ +     +    V+  + +++ + +E +DI  I G
Sbjct: 340 LDRAIASKGIYPAVNPLTSTSRILEPGIVGERHYAVAQRVINILQKNKELQDIIAILG 397


>gi|217976537|ref|YP_002360684.1| F0F1 ATP synthase subunit beta [Methylocella silvestris BL2]
 gi|217501913|gb|ACK49322.1| ATP synthase F1, beta subunit [Methylocella silvestris BL2]
          Length = 483

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 24/311 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+ +D    +   D     + ++ P    Q  E     TGI+V+D+  P   G
Sbjct: 92  GRIMNVIGESVDEAGPILASDF--RAIHQLAPTYAEQATEAQILVTGIKVVDLLAPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  +  N
Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYYEMIESKVNLN 208

Query: 214 LK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
            +         K  +V     E P  R    LT +TIAE F  KG +VL  +D+I RF  
Sbjct: 209 PRENNGSAAGSKCALVYGQMSEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 269 AGSEMSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             +  + LD   VL+RS+AE+G YP VDPL S SR+       +E   V+  +   + R+
Sbjct: 327 PATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPLIVGEEHYAVARQVQQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 387 KGLQDIIAILG 397


>gi|4519344|dbj|BAA75587.1| ATP synthase beta-subunit [Chlamydomonas debaryana]
          Length = 376

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNV-LVEATLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +  
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEETR 387
           + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S+ T    + R++E +
Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYESAQTVKKTLQRYKELQ 326

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 327 DIIAILG 333


>gi|183206692|gb|ACC54544.1| ATP synthase beta subunit [Campanula arvatica]
          Length = 487

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 208

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 209 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 268

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 269 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 326

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 327 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 386

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 387 YKELQDIITILG 398


>gi|183206648|gb|ACC54522.1| ATP synthase beta subunit [Campanula fragilis]
          Length = 461

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 193

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 194 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 253

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 311

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 371

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 372 YKELQDIITILG 383


>gi|1703718|sp|P50003|ATPB_PRODI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150558|gb|AAA25556.1| ATP synthase beta subunit [Prochloron didemni]
          Length = 483

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + S  I    P   +       F+TGI+VID+ TP  
Sbjct: 95  ATLGRIFNILGEPVDNQGPVYTAETS-PIHRAAPKFTDLDTKPTVFETGIKVIDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE----VREFIEDYL-- 210
            G +IG+F G+G+GK+ ++     +   +   +S+ G   ER RE      E IE  +  
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIAINHGGVSVFGGVGERTREGNDLYNEMIESKVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL +S   +V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 ADNLNESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +        D      ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQAGIVGEDHYNTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|154505250|ref|ZP_02041988.1| hypothetical protein RUMGNA_02764 [Ruminococcus gnavus ATCC 29149]
 gi|153794448|gb|EDN76868.1| hypothetical protein RUMGNA_02764 [Ruminococcus gnavus ATCC 29149]
          Length = 456

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG+PID G   L +  + +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGLGRPIDNGPQILPQARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F+E + 
Sbjct: 140 TLVRGQKLPIFSASGLPHAKLAAQIARQAKVLGTDEKFAVVFAAMGITFEESNFFVESFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               + ++V+ V  +++  I R   P  A+T AEY + + D +VL+IL  IT +A ++RE
Sbjct: 200 ETGAIDRTVLFVNLANDPAIERIATPKMALTAAEYLAFEKDMHVLVILTDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  + ER G    +KG+IT +  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLATMYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383
             I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L     R 
Sbjct: 320 GYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFAAYARG 379

Query: 384 EETRDIRLIGG 394
           ++ +++ +I G
Sbjct: 380 KDAKELMVILG 390


>gi|183206612|gb|ACC54504.1| ATP synthase beta subunit [Theilera guthriei]
          Length = 480

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 201

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +  S +  +   S+   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSKEHYETAQSVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|154249022|ref|YP_001409847.1| F0F1 ATP synthase subunit beta [Fervidobacterium nodosum Rt17-B1]
 gi|171769321|sp|A7HJV7|ATPB_FERNB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154152958|gb|ABS60190.1| ATP synthase F1, beta subunit [Fervidobacterium nodosum Rt17-B1]
          Length = 472

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 167/300 (55%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+IN +G+PID +  L   D+    + +  P+M  Q+ E +  +TG++VID+  P   
Sbjct: 90  LGRMINVIGEPIDENGELK--DVEYWPIHRPAPSMAEQKTEIEILETGLKVIDLLAPFPK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216
           G +IG F G+G+GK+ L+    R+   +    S+   VGER RE  + ++E      L  
Sbjct: 148 GGKIGFFGGAGVGKTVLVMEMIRNIAIEHKGFSMFAGVGERTREGNDLYLEMQEAGVLNN 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R    LTA+T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TVLVFGQMNEPPGARFRVALTALTVAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  L ERI  +  ++G+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATDMGELQERI--TSTKRGSITSVQAIYVPADDITDPAPATTFTHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           IVL+R LA  G YP VDPL S S++ D      E  ++   +  ++ R+++ +DI  I G
Sbjct: 326 IVLSRQLAALGLYPAVDPLDSTSKILDPNIVGKEHYEVARGVQEVLQRYKDLQDIIAILG 385


>gi|299143386|ref|ZP_07036466.1| V-type sodium ATPase, B subunit [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298517871|gb|EFI41610.1| V-type sodium ATPase, B subunit [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 464

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 18/355 (5%)

Query: 57  DNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID 114
           D +GQV++I+ D  I+ +    +G       ++F    F I  S    GRV + +G+PID
Sbjct: 40  DLVGQVVKIDGDSAIIQVFGENLGVSTKNSKVIFEAHPFEIPLSNEILGRVFDGIGRPID 99

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   D    +  +    + RQ      +TGI  ID    L  GQ++ +F+GSG+  
Sbjct: 100 KGGDI-YSDEFYNVNGRPINPVARQYPRNFIQTGISSIDGLMTLIRGQKLPIFSGSGLPH 158

Query: 175 STLLSMFAR--------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDE 226
           + L +   R        SD    ++ + +G +  E   F E +    + + VV+     +
Sbjct: 159 NELAAQIVRQAKISSKSSDENFAIVFAAIGVKHDEADYFREAFKNAGVSEKVVMYINYAD 218

Query: 227 SPILRKM-APLTAVTIAEYFSSKGDN-VLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            PI+ ++  P  A+T AEY + K  N VL+I+  +T +  ++RE++++  E+P  +GYP 
Sbjct: 219 DPIMERLIVPKCALTAAEYLAYKEHNHVLVIMTDVTSYGEALREVSSSREEVPSRKGYPG 278

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            ++S+L  L ER G  +   G++T +  + +  D+   PI D    I +G IVL+R L +
Sbjct: 279 HLYSDLAMLYERAGMIKDIDGSVTLIPILTMPNDDITHPIPDLSGFITEGQIVLSRDLNQ 338

Query: 345 EGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            G YPPV+ L S+SRL      +     D   L S L     + +E R +  I G
Sbjct: 339 SGVYPPVNVLPSLSRLMKDGIGEGYTREDHADLSSQLFASYSKVQEVRALAQIIG 393


>gi|119503555|ref|ZP_01625638.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium
           HTCC2080]
 gi|119460617|gb|EAW41709.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium
           HTCC2080]
          Length = 465

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E IS G  V + G     P      GR+++ LG PID    +G+   S  
Sbjct: 49  VVRAIAMGSSEGISRGLSVENTGAPISVPVGIETLGRIMDVLGNPIDEKGPIGEQQRSA- 107

Query: 128 IMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +  PA +     E+  +TGI+VID+  P   G ++G+F G+G+GK+  +     +  
Sbjct: 108 -IHRAAPAYDELAASEEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIA 166

Query: 187 FDKVIISL---VGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235
            +   +S+   VGER RE  +F  +         +N+ +S V  V    +E P  R    
Sbjct: 167 TEHSGLSVFAGVGERTREGNDFYYEMQESGVVNIENMDQSKVAMVYGQMNEPPGNRLRVA 226

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L E
Sbjct: 227 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL 
Sbjct: 287 RI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLD 344

Query: 356 SVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 345 STSRQLDPLVIGTEHYDVARGVQSVLQRYKELKDIIAILG 384


>gi|90994450|ref|YP_536940.1| ATP synthase CF1 beta subunit [Porphyra yezoensis]
 gi|118573718|sp|Q1XDM8|ATPB_PORYE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|90819014|dbj|BAE92383.1| ATP synthase CF1 beta chain [Porphyra yezoensis]
          Length = 475

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D    +    P PA  +   +   F+TGI+V+D+  P  
Sbjct: 90  LGRIFNVLGEPVD---NLGPVDSESTLPIHRPAPAFTKLETKPNIFETGIKVVDLLAPYR 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVID 206

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNLK+S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 207 ADNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 266

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP+  +
Sbjct: 267 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTEGSITSIQAVYVPADDLTDPVPAT 324

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R+LA +G YP VDPL S S +        E       +   + R++E 
Sbjct: 325 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVGTEHYSTAQEVKSTLQRYKEL 384

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 385 QDIIAILG 392


>gi|210075206|ref|XP_500475.2| YALI0B03982p [Yarrowia lipolytica]
 gi|199425131|emb|CAG82701.2| YALI0B03982p [Yarrowia lipolytica]
          Length = 509

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 18/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+IN  G+PID    + +    + I +  P    +    +  +TGI+V+D+  P   G 
Sbjct: 124 GRIINVCGEPIDERGPI-EATKFLPIHADPPTFAEQSTTAEVLETGIKVVDLLAPYARGG 182

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214
           +IG+F G+G+GK+     L++  A++     V    VGER RE     RE  E  +  NL
Sbjct: 183 KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFCG-VGERTREGNDLYREMKETGV-INL 240

Query: 215 K---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           +   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 241 EGESKVTLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVS 300

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  +
Sbjct: 301 ALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSVTSVQAVYVPADDLTDPAPATTFA 358

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SRL D      E   + S++   +  ++  +DI
Sbjct: 359 HLDATTVLSRGISELGIYPAVDPLDSKSRLLDIDVVGQEHYDVASNVQQTLQAYKSLQDI 418

Query: 390 RLIGG 394
             I G
Sbjct: 419 IAILG 423


>gi|169628544|ref|YP_001702193.1| F0F1 ATP synthase subunit beta [Mycobacterium abscessus ATCC 19977]
 gi|169240511|emb|CAM61539.1| ATP synthase beta subunit AtpD [Mycobacterium abscessus]
          Length = 476

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 163/301 (54%), Gaps = 15/301 (4%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLC 159
           G V NALG  +D     G G D     + + PPA ++   R E   +TG++V+D+ TP  
Sbjct: 97  GHVFNALGNCLD---EPGYGSDFEKWSIHRKPPAFDQLEPRTEM-LETGLKVVDLLTPYV 152

Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK
Sbjct: 153 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLK 212

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
            + +V    DE P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++T  G
Sbjct: 213 DTALVFGQMDEPPGTRMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLG 272

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD 
Sbjct: 273 RMPSAVGYQPTLADEMGELQERI--TSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDA 330

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L+R++  +G +P VDPLAS S +   +   +E  ++   +  ++ R+++ +DI  I 
Sbjct: 331 TTELSRAVFSKGIFPAVDPLASSSTILLPSVVGEEHYRVAQEVIRILQRYQDLQDIIAIL 390

Query: 394 G 394
           G
Sbjct: 391 G 391


>gi|110669124|ref|YP_658935.1| V-type ATP synthase subunit B [Haloquadratum walsbyi DSM 16790]
 gi|121684653|sp|Q18FB8|VATB_HALWD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|109626871|emb|CAJ53340.1| H(+)-transporting two-sector ATPase, subunit B (A-type ATP
           synthase) [Haloquadratum walsbyi DSM 16790]
          Length = 475

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 18/292 (6%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F     ++  +    GRV++  G+PIDG   +   D   EI+        R+  E+  +T
Sbjct: 70  FSGETLKMKVTEDLLGRVLDGSGQPIDGGPEI-LADERREIVGAAINPYAREYPEEFIQT 128

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VII 192
           G+  +D    L  GQ++ +F+GSG+  + L    AR     +               VI 
Sbjct: 129 GVAAVDGMNTLVRGQKLPIFSGSGLPHNELALQIARQATVPEEENADDNEDDGSEFAVIF 188

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             +G    E  EF+ED+     L++SVV +  +D+  + R + P   +T AEY + + D 
Sbjct: 189 GAMGITAEEANEFMEDFERTGALERSVVFMNLADDPAVERTVTPRMVLTTAEYLAFEKDY 248

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL+IL  +T +  ++REI     E+P  RGYP  ++++L  L ER G  E  +G++T +
Sbjct: 249 HVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLATLYERAGRIEGREGSVTQI 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             + + GD+   PI D    I +G I ++R L  +G  PPV+ L S+SRL D
Sbjct: 309 PILTMPGDDDTHPIPDLTGYITEGQIYVDRDLNSQGVQPPVNVLPSLSRLMD 360


>gi|308177047|ref|YP_003916453.1| H(+)-transporting two-sector ATPase subunit beta [Arthrobacter
           arilaitensis Re117]
 gi|307744510|emb|CBT75482.1| H(+)-transporting two-sector ATPase, beta chain [Arthrobacter
           arilaitensis Re117]
          Length = 481

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 8/298 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG  +D D+S  +      I  + P     +   +  +TGI+ ID+ TP   G 
Sbjct: 101 GHIFNVLGDALDVDNSEIQVTERWPIHRQPPKFSELEGSTEMLETGIKSIDLLTPYIKGG 160

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK + 
Sbjct: 161 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMDEANVLKDTA 220

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD    
Sbjct: 281 SAVGYQPNLADEMGLLQERITSTKGR--SITSMQAVYVPADDYTDPAPAATFAHLDATTE 338

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP +DPL S SR+ D  +   D   +   +  ++ + +E +DI  I G
Sbjct: 339 LSREIASRGLYPAIDPLTSTSRILDPQYIGQDHYDVAIRVKAILQKNKELQDIIAILG 396


>gi|289422486|ref|ZP_06424329.1| V-type ATP synthase beta chain 1 [Peptostreptococcus anaerobius
           653-L]
 gi|289157058|gb|EFD05680.1| V-type ATP synthase beta chain 1 [Peptostreptococcus anaerobius
           653-L]
          Length = 461

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 160/316 (50%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ +N D   +        I+L D  + F      +S S    GRV + +GKP DG  
Sbjct: 42  GRVLEVNGDKAMVQLFEGSSGINLKDSKVRFLAKPLTLSVSEDMIGRVFDGMGKPKDGGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D  ++I       + R    +  +TG+  ID    L  GQ++ +F+GSG+  + L
Sbjct: 102 DLIPED-KLDINGIAINPVARDYPSEFIQTGVSAIDGLNTLVRGQKLPIFSGSGLPHANL 160

Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR        D F  V+   +G    E + FI+D+     + +SV+ +  +++  I
Sbjct: 161 AAQIARQAKVLGTDDKF-AVVFGAIGITFEEAQYFIDDFKKTGAIDRSVLFMNLANDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+IL  +T +  ++REI+    E+P  RGYP  +++
Sbjct: 220 ERISTPRMALTCAEYLAFEKGMHVLVILTDLTNYCEALREISAARREVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G  +   G+IT V  + +  D+   PI D    I +G I+L+R+L ++   
Sbjct: 280 DLSTLYERAGKIKGRPGSITQVPILTMPEDDKTHPIPDLTGYITEGQIILSRALYKKNMM 339

Query: 349 PPVDPLASVSRLADKA 364
           PP+D L S+SRL DK 
Sbjct: 340 PPIDVLPSLSRLKDKG 355


>gi|307343688|emb|CBJ19261.1| atpD synthase beta subunit [Micromonospora sp. GUI19]
          Length = 298

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|170782289|ref|YP_001710622.1| F0F1 ATP synthase subunit beta [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|190358299|sp|B0RED4|ATPB_CLAMS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169156858|emb|CAQ02026.1| ATP synthase beta chain [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 486

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 18/274 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP----PAMNRQRVEKG--FKTGIRVIDIFT 156
           G+V N  G  ++ +     G   +EI  + P    P M  Q   K   F+TGI+VID+ T
Sbjct: 104 GKVFNVTGDILNNE-----GGEPIEITERWPIHRKPPMFDQLESKTQLFETGIKVIDLLT 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I E     
Sbjct: 159 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIMEMEEAG 218

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF   K  +VLL +D+I RF  +  E++T
Sbjct: 219 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVST 278

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 279 LLGRMPSAVGYQPNLADEMGVLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 336

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           LD    L+R +A  G YP VDPL S SR+ D  +
Sbjct: 337 LDATTELSREIASRGLYPAVDPLTSTSRILDPRY 370


>gi|88705417|ref|ZP_01103128.1| ATP synthase beta chain [Congregibacter litoralis KT71]
 gi|88700507|gb|EAQ97615.1| ATP synthase beta chain [Congregibacter litoralis KT71]
          Length = 465

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 15/305 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ + +  I    P        +   +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDERGPIGEKERA-SIHRAAPTYEELSASDDLLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210
            ++G+F G+G+GK+  +     +       +S+   VGER RE  +F        + D  
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQESKVVDIE 201

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
             +  K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 202 NPSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 261

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 262 ALLGRMPSAVGYQPTLAEEMGALQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFA 319

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  +VL+R +A +G YP VDPL S SR  D     +E  +    + +++ R++E +DI
Sbjct: 320 HLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLIGNEHYEAARGVQNVLQRYKELKDI 379

Query: 390 RLIGG 394
             I G
Sbjct: 380 IAILG 384


>gi|86135196|ref|ZP_01053778.1| ATP synthase F1, beta subunit [Polaribacter sp. MED152]
 gi|85822059|gb|EAQ43206.1| ATP synthase F1, beta subunit [Polaribacter sp. MED152]
          Length = 503

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  G  IDG  +L K G   + I    P   +     +   TGI+VID+  P   G
Sbjct: 91  GRLFNVTGDAIDGLGNLSKVGKDGLSIHRSAPKFEDLSVSTEVLFTGIKVIDLIEPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 211 DDFMHSMEEGGWDLSKVDKAGMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 270

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 271 EAQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 328

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 388

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  ++ R++E +DI  I G
Sbjct: 389 LGDEHYNCAQRVKEILQRYKELQDIIAILG 418


>gi|328957290|ref|YP_004374676.1| V-type sodium ATPase subunit B [Carnobacterium sp. 17-4]
 gi|328673614|gb|AEB29660.1| V-type sodium ATPase subunit B [Carnobacterium sp. 17-4]
          Length = 443

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 158/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDL-VFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           GQV+ IN D   +        I+L D  V   GR   +  S    GRV + +G+  DG  
Sbjct: 27  GQVLEINGDKAMVQIFEGSSGINLQDTKVRFLGRPLSLDVSEDMVGRVFDGMGRVNDGGP 86

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   + +++I  +    M R   ++  +TGI  ID    L  GQ++ VF+GSG+    L
Sbjct: 87  ELIP-EKTLDINGEAINPMARDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHKEL 145

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR      SD    V+ + +G    E   F+ED+     + +SV+ +  +D+  I 
Sbjct: 146 AAQIARQATVKNSDEKFAVVFAAIGITFEEAEFFMEDFRKTGAIDRSVMFINLADDPAIE 205

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D +VL+I+  +T +  ++REI+    E+P  RGYP  +++ 
Sbjct: 206 RIATPKMALTAAEYLAYEKDMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 265

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G     KG++T +  + +  D+   PI D    I +G I+L+R L   G  P
Sbjct: 266 LATLYERAGRLVGGKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYNSGVQP 325

Query: 350 PVDPLASVSRLADKA 364
           P+D L S+SRL DK 
Sbjct: 326 PIDALQSLSRLKDKG 340


>gi|326403872|ref|YP_004283954.1| ATP synthase subunit beta [Acidiphilium multivorum AIU301]
 gi|325050734|dbj|BAJ81072.1| ATP synthase subunit beta [Acidiphilium multivorum AIU301]
          Length = 476

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 157/307 (51%), Gaps = 18/307 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +     +  I  + P    +    +   TGI+V+D+  P   G 
Sbjct: 88  GRILNVIGEPIDERGPI-PTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAPYLKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +        LGD
Sbjct: 147 KIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGD 206

Query: 213 NL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           N     K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  +  E
Sbjct: 207 NTTEGSKVALVYGQMNEPPGARMRVGLSGLTMAEYFRDEEGQDVLFFVDNIFRFTQAGAE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   + 
Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATS 324

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            S LD    LNR++AE+G YP VDPL S SR  D     +E   V+  +  ++  ++  +
Sbjct: 325 FSHLDATTTLNRAIAEKGIYPAVDPLDSTSRALDPRIVGEEHYNVAREVQRILQSYKSLQ 384

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 385 DIIAILG 391


>gi|292572450|gb|ADE30365.1| ATP synthase beta chain [Rickettsia prowazekii Rp22]
          Length = 474

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 17/316 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N LG+PIDG   +    +S  I    P  +N+        TGI+V+
Sbjct: 79  IRIPVGTETLGRIMNVLGEPIDGKGEIKSATIS-SIYKPAPDFINQSTERDILVTGIKVV 137

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + 
Sbjct: 138 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 197

Query: 210 LGD---NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259
           +     NL+     K  +V    +E P  R    L+ +TIAE F   + G +VL  +D+I
Sbjct: 198 IASGVINLEEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNI 257

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+
Sbjct: 258 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADD 315

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R +AE G YP VDPL S S++ D     ++   V+  +  
Sbjct: 316 LTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEKHYGVARQVQQ 375

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 376 VLQTYKSLQDIIAILG 391


>gi|168059498|ref|XP_001781739.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666823|gb|EDQ53468.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 486

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 152/279 (54%), Gaps = 26/279 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+ ID      +GD+S E    I  + P  +++    +  +TGI+V+D+ 
Sbjct: 95  ATLGRIINVIGEAIDE-----RGDISREHVLGIHREAPAFVDQGTEMEILETGIKVVDLL 149

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     +E IE
Sbjct: 150 APYQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGFSVFAG-VGERTREGNDLYKEMIE 208

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VL  +D+I R
Sbjct: 209 SGVIKLGDKQMESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLFFIDNIFR 268

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 269 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTQKGSITSVQAIYVPADDLT 326

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 327 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 365


>gi|183206654|gb|ACC54525.1| ATP synthase beta subunit [Hanabusaya asiatica]
          Length = 472

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 200

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVXVPADDLTDP 318

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 378

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 379 YKELQDIITILG 390


>gi|261250659|ref|ZP_05943234.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
 gi|260939228|gb|EEX95215.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
          Length = 467

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + +  I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNEIALLETGVKVIDLVCPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +   
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR+ D      E   +   +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|183206678|gb|ACC54537.1| ATP synthase beta subunit [Campanula spatulata subsp. filicaulis]
          Length = 498

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|148272349|ref|YP_001221910.1| F0F1 ATP synthase subunit beta [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|190358280|sp|A5CQ60|ATPB_CLAM3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|147830279|emb|CAN01213.1| ATP synthase beta chain [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 486

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 18/274 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP----PAMNRQRVEKG--FKTGIRVIDIFT 156
           G+V N  G  ++ +     G   +EI  + P    P M  Q   K   F+TGI+VID+ T
Sbjct: 104 GKVFNVTGDILNNE-----GGEPIEITERWPIHRKPPMFDQLESKTQLFETGIKVIDLLT 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212
           P   G +IG+F G+G+GK+ L+    +    D   +S+   VGER RE  + I E     
Sbjct: 159 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIMEMEEAG 218

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    DE P  R    L+A+T+AEYF   K  +VLL +D+I RF  +  E++T
Sbjct: 219 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVST 278

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 279 LLGRMPSAVGYQPNLADEMGVLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 336

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           LD    L+R +A  G YP VDPL S SR+ D  +
Sbjct: 337 LDATTELSREIASRGLYPAVDPLTSTSRILDPRY 370


>gi|4519274|dbj|BAA75552.1| ATP synthase beta-subunit [Volvox carteri]
          Length = 376

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D   ++ K + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 32  GRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 90

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 91  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 150

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P       LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 151 LSDS--KVALVYGQMNEPPGACMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R++E 
Sbjct: 267 FAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|294880511|ref|XP_002769041.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239872136|gb|EER01759.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 387

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 155/304 (50%), Gaps = 20/304 (6%)

Query: 106 INALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           +N +G+PID    LG  + +    I    P       V +   TGI+V+D+  P   G +
Sbjct: 1   MNVIGEPID---ELGPIECNTRWPIHRPAPTFSEMDTVARQLYTGIKVVDLLAPYTKGGK 57

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL------ 214
           IG+F G+G+GK+ ++     +         + + VGER RE  +   + +   +      
Sbjct: 58  IGLFGGAGVGKTVVIMELINNIAMKHGGFSVFAGVGERTREGNDLYHEMIAGGVIKKDKA 117

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++ 
Sbjct: 118 PGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDEEGQDVLLFIDNIFRFTQACSEVSA 177

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 178 LLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAH 235

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD + VL+R +AE G YP VDPL S SR+ D +    E   V+ ++  ++  ++  +DI 
Sbjct: 236 LDANTVLSRHIAELGIYPAVDPLDSTSRMLDPSIVGQEHYDVARAVQKVLQDYKSLQDII 295

Query: 391 LIGG 394
            I G
Sbjct: 296 AILG 299


>gi|183206690|gb|ACC54543.1| ATP synthase beta subunit [Campanula divaricata]
          Length = 485

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 206

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 207 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 266

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 267 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 324

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 325 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 384

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 385 YKELQDIITILG 396


>gi|228016960|gb|ACP51784.1| ATP synthase CF1 beta subunit [Pinus banksiana]
          Length = 492

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 161/317 (50%), Gaps = 24/317 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P           F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
            HG +IG+F G+G+GK+     L++  A++     V   +  ER RE      E  E  +
Sbjct: 161 RHGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++T  G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSTLLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 397 KELQDIIAI----PGLD 409


>gi|183206662|gb|ACC54529.1| ATP synthase beta subunit [Campanula aizoides]
          Length = 495

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P
Sbjct: 102 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSG 217

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 218 VINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIITILG 406


>gi|159045474|ref|YP_001534268.1| F0F1 ATP synthase subunit beta [Dinoroseobacter shibae DFL 12]
 gi|190358233|sp|A8LJR4|ATPB2_DINSH RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|157913234|gb|ABV94667.1| ATP synthase subunit beta [Dinoroseobacter shibae DFL 12]
          Length = 474

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 163/319 (51%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   I       GR++N +G+PID    + +   S  I    P    +    +   TGI+
Sbjct: 75  GPITIPVGNATLGRIMNVIGEPIDEKGPV-EASESRAIHQPAPEFSEQSTGSEILVTGIK 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201
           VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE    
Sbjct: 134 VIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDL 191

Query: 202 VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
             E IE  +   DNL +S V  V    +E P  R    LT +T+AE F  + G +VL  +
Sbjct: 192 YHEMIESNVIKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFV 251

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT++ +V V 
Sbjct: 252 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKGGSITSIQAVYVP 309

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D     +E  ++   
Sbjct: 310 ADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPGIVGEEHYQVARD 369

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ R++  +DI  I G
Sbjct: 370 VQGILQRYKSLQDIIAILG 388


>gi|305666086|ref|YP_003862373.1| ATP synthase subunit B [Maribacter sp. HTCC2170]
 gi|88707520|gb|EAQ99763.1| ATP synthase subunit B [Maribacter sp. HTCC2170]
          Length = 502

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG   L K G   + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGIGDLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFLHSMEEGGWDLSKVDKKAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              D       +  L+ R++E +DI  I G
Sbjct: 388 LGNDHYACAQRVKELLQRYKELQDIIAILG 417


>gi|253682571|ref|ZP_04863368.1| V-type sodium ATP synthase, B subunit [Clostridium botulinum D str.
           1873]
 gi|253562283|gb|EES91735.1| V-type sodium ATP synthase, B subunit [Clostridium botulinum D str.
           1873]
          Length = 460

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 167/318 (52%), Gaps = 17/318 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    + GR   I  S    GRV + LG+P DG  
Sbjct: 42  GKVLEISEDKALIQLFEGSTGINLKDTKTRFLGRPLEIGLSEDMLGRVFDGLGRPKDGGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +    K D++ E ++      +R    +  +TG+  ID    L  GQ++ VF+GSG+  
Sbjct: 102 KIIPEEKRDINGEPLN----PFSRDYPSEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDES 227
           + L +  AR      S+    V+ + +G    E + FIED+    ++ ++V+ +  +++ 
Sbjct: 158 AELAAQIARQARVLGSNSKFAVVFAAMGITFEEAQFFIEDFTKTGSIDRTVLFMNLANDP 217

Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            + R   P  A+T AE+ +  KG +VL+I+  +T +A ++RE++    E+P  RGYP  +
Sbjct: 218 AVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  L ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L ++G
Sbjct: 278 YTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337

Query: 347 RYPPVDPLASVSRLADKA 364
             PP+D L S+SRL DK 
Sbjct: 338 IMPPIDVLPSLSRLKDKG 355


>gi|228472842|ref|ZP_04057599.1| ATP synthase F1, beta subunit [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275424|gb|EEK14201.1| ATP synthase F1, beta subunit [Capnocytophaga gingivalis ATCC
           33624]
          Length = 504

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G   + I  K P   +   V +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDGIDGLGNLPKEGQHGLPIHRKAPKFEDLSTVTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLMREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           +                        K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 EEFMHSMEEGGWDLSKVDREALKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 DGEGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +  +    +  L+  ++E +DI  I G
Sbjct: 388 LGKEHYECAQRVKELLQHYKELQDIIAILG 417


>gi|254509073|ref|ZP_05121176.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus 16]
 gi|219548006|gb|EED25028.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus 16]
          Length = 467

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + +  I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNEIALLETGVKVIDLVCPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +   
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR+ D      E   +   +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|116256390|dbj|BAF35226.1| ATP synthase beta subunit [Volvox dissipatrix]
          Length = 376

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G    + ++ I    P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NMGNVIVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R+
Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDRAQSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|15425568|emb|CAC60247.1| ATP synthase beta subunit [Cyphia rogersii]
          Length = 489

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           +   GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  SATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 212 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 330 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIITILG 401


>gi|326566564|gb|EGE16710.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 12P80B1]
          Length = 473

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 157/317 (49%), Gaps = 28/317 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PID    +   +    I  + P    +    +  +TGI+VID+  P  
Sbjct: 80  ATLGRIMDVLGRPIDEAGPV-NAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLLCPFA 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205
            G ++G+F G+G+GK+  +     +       +S+   VGER RE  +F           
Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVN 198

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDS 258
            ED+      K  +V    +E P  R    LT +T+AEYF       + KG +VLL +D+
Sbjct: 199 TEDF---TQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVDN 255

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D
Sbjct: 256 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTQSGSITSVQAVYVPAD 313

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377
           +  DP   +  + LD  +VL+R +A +G YP VDPL S S   D     +E   V+  + 
Sbjct: 314 DLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSHQLDPQVIGEEHYSVARGVQ 373

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ R++E +DI  I G
Sbjct: 374 EVLQRYKELKDIIAILG 390


>gi|225678914|gb|EEH17198.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb03]
          Length = 607

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 219 LGRIMNVTGDPIDERGPI-KHSKKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 277

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 278 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 336

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 337 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 396

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 397 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 454

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E  ++ + +  ++  ++  +DI
Sbjct: 455 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDI 514

Query: 390 RLIGG 394
             I G
Sbjct: 515 IAILG 519


>gi|307343722|emb|CBJ19278.1| atpD synthase beta subunit [Micromonospora sp. CR39]
          Length = 301

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|254468235|ref|ZP_05081641.1| ATP synthase F1, beta subunit [beta proteobacterium KB13]
 gi|207087045|gb|EDZ64328.1| ATP synthase F1, beta subunit [beta proteobacterium KB13]
          Length = 477

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 21/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+++ LG+PID    +GK D      I  K P         +  +TGI+VID+  P   
Sbjct: 96  GRIMDVLGRPID---EVGKIDTKEHRSIHQKAPEFSELSPSVELLETGIKVIDLICPFAK 152

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +        
Sbjct: 153 GGKVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMSDAGVIK 211

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
            D++K+S V  V    +E P  R    L+ +T+AE F  +G +VL  +D+I R+  +  E
Sbjct: 212 LDDMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTE 271

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 272 VSALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATT 329

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387
              LD  +VL+R +A  G YP VDPL S SR  D +    D  ++   +   + +++E R
Sbjct: 330 FQHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQIVGEDHYQVARRVQATLQKYKELR 389

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 390 DIIAILG 396


>gi|115443579|ref|YP_778598.1| ATP synthase CF1 beta chain [Bigelowiella natans]
 gi|122239917|sp|Q06J29|ATPB_BIGNA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|110810224|gb|ABG91430.1| ATP synthase CF1 beta chain [Bigelowiella natans]
          Length = 477

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 161/307 (52%), Gaps = 22/307 (7%)

Query: 104 RVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           R+ N LG+PID   +LG  K + +  I    P  ++     + F+TGI+VID+  P   G
Sbjct: 93  RIFNVLGQPID---NLGDVKNEETRPIHRSAPEFVDLDIRLEIFETGIKVIDLLAPYRRG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212
            ++G+F G+G+GK+ L+     +       +S+   VGER RE  +   +       + D
Sbjct: 150 GKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIVED 209

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF--SSKGDNVLLILDSITRFAHSIRE 268
           NL +S V  V    +E P  R    L A+T+AE+F  SSK D VLL +D++ RF  +  E
Sbjct: 210 NLLESKVTLVYGQMNEPPGARMRVGLAALTMAEFFRDSSKQD-VLLFIDNVFRFVQAGSE 268

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP A + 
Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAAATT 326

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +       D   +    +   + R++E +
Sbjct: 327 FAHLDATTVLSRGLASKGIYPAVDPLGSTSTMLQPWIVGDSHYECAQKVKQTLQRYKELQ 386

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 387 DIIAILG 393


>gi|327329861|gb|EGE71615.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL097PA1]
          Length = 484

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 20/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156
           G V N  G  ++ D S      ++E+  + P     PA +    E +  +TGI+V+D+ T
Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212
           P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +     
Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            LK + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF+ +  E++T
Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+ +L ERI  +     +IT++ +V V  D++ DP   +  + 
Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D      E     + +  ++ R +E +DI 
Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLCVGQEHYDTATQVKQILQRNKELQDII 395

Query: 391 LIGG 394
            I G
Sbjct: 396 AILG 399


>gi|11559352|dbj|BAB18834.1| ATP synthase beta-subunit [Astrephomene gubernaculifera]
          Length = 376

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVIYEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK  +   ++   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYECAQNVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|294085411|ref|YP_003552171.1| F1-ATP synthase subunit beta [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664986|gb|ADE40087.1| F1-ATP Synthase Beta Chain [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 474

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 156/306 (50%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K      I    P  +++    +   TGI+V+D+  P   G
Sbjct: 87  LGRILNVIGEPVDEGKPV-KAKKYYPIHRAAPDYVDQSTEAEILVTGIKVVDLLAPYAKG 145

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +   +   
Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMVESGVIMP 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
                K+ +V    +E P  R    LT +T+AEYF   +G +VL  +D+I RF  +  E+
Sbjct: 205 DGEGSKAALVYGQMNEPPGARSRVALTGLTLAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTDPAPAASF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VDPL S SR+ D     D    +   +  ++ +++  +D
Sbjct: 323 AHLDATTVLSRQIAELGIYPAVDPLDSSSRMLDPRIVGDHHYSIARQVQEVLQQYKSLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|114328720|ref|YP_745877.1| F0F1 ATP synthase subunit beta [Granulibacter bethesdensis CGDNIH1]
 gi|122326328|sp|Q0BQE8|ATPB_GRABC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114316894|gb|ABI62954.1| ATP synthase beta chain [Granulibacter bethesdensis CGDNIH1]
          Length = 476

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 18/308 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I  + P    +    +   TGI+V+D+  P   G
Sbjct: 87  LGRILNVIGEPIDERGPV-DAKKTYSIHREAPSFEEQAASAEILVTGIKVVDLLAPYLKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LG 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +        LG
Sbjct: 146 GKIGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLG 205

Query: 212 DNL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
           +N     K  +V    +E P  R    L+ ++IAEYF   +G +VL  +D+I RF  +  
Sbjct: 206 ENTTEGSKVALVYGQMNEPPGARARVALSGLSIAEYFRDEEGQDVLFFVDNIFRFTQAGA 265

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +
Sbjct: 266 EVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAT 323

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VLNR+++E+G YP VDPL S SR  D     +E  K+   +  ++  ++  
Sbjct: 324 SFAHLDATTVLNRAISEKGIYPAVDPLDSTSRSLDPRIVGEEHYKVARDVQRILQTYKSL 383

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 384 QDIIAILG 391


>gi|78213686|ref|YP_382465.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9605]
 gi|118573771|sp|Q3AHM2|ATPB_SYNSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78198145|gb|ABB35910.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9605]
          Length = 487

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 158/306 (51%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +     +  I    P     +   K F+TGI+VID+  P   G
Sbjct: 99  LGRIFNVLGEPVDEQGPVNT-TATAPIHRDAPNITELETKPKVFETGIKVIDLLAPYRQG 157

Query: 162 QRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------GD 212
            ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++        D
Sbjct: 158 GKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVINAD 217

Query: 213 NLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           +L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  E+
Sbjct: 218 DLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ER+  +   +G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLGTDVGALQERV--ASTVEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VLNR+LA +G YP VDPL S S +   A   DE  +   ++   + R++E +D
Sbjct: 336 AHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|58039763|ref|YP_191727.1| F0F1 ATP synthase subunit beta [Gluconobacter oxydans 621H]
 gi|81819085|sp|Q5FRC5|ATPB1_GLUOX RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|58002177|gb|AAW61071.1| ATP synthase beta chain [Gluconobacter oxydans 621H]
          Length = 487

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 21/312 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +   +L   I    P    +    +   TGI+V+D+  P  
Sbjct: 95  ATLGRILNVVGEPIDERGPISS-ELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYL 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE------------VRE 204
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE            V +
Sbjct: 154 KGGKIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYFEMQDAGVIK 213

Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
             ED   +   K  +V    +E P  R    LT +++AEYF   +G +VL  +D+I RF 
Sbjct: 214 IAEDGSTEG-SKVALVYGQMNEPPGARSRVALTGLSLAEYFRDEEGQDVLFFVDNIFRFT 272

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP
Sbjct: 273 QAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDP 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VLNRS+AE G YP VDPL S SR  D     +E  ++   +   +  
Sbjct: 331 APAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGEEHYQVARQVQQTLQT 390

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 391 YKGLQDIIAILG 402


>gi|183206688|gb|ACC54542.1| ATP synthase beta subunit [Campanula parryi]
          Length = 484

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 97  GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 212

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 213 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 272

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 273 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 331 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 390

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 391 YKELQDIITILG 402


>gi|183206672|gb|ACC54534.1| ATP synthase beta subunit [Campanula lusitanica]
          Length = 484

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 207

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 208 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIITILG 397


>gi|255954579|ref|XP_002568042.1| Pc21g10070 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589753|emb|CAP95904.1| Pc21g10070 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 518

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 22/314 (7%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS    GR+IN  G PID    + K      I ++ P  +++    +   TGI+V+D+
Sbjct: 124 VGPS--TLGRIINVTGDPIDERGPI-KATKFAPIHAEPPAFVDQSTSAEILVTGIKVVDL 180

Query: 155 FTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
             P   G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +  
Sbjct: 181 LAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFCG-VGERTREGNDLYHEMQ 239

Query: 211 --------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                   GD+  K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I R
Sbjct: 240 ETGVIQLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFR 297

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  
Sbjct: 298 FTQAGSEVSALLGRIPSAVGYQPTLAVDMGVMQERI--TTTQKGSITSVQAVYVPADDLT 355

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLI 380
           DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     +E    +S +  ++
Sbjct: 356 DPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIIGEEHYATASRVQQML 415

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 416 QEYKSLQDIIAILG 429


>gi|156086206|ref|XP_001610512.1| ATP synthase F1 beta chain [Babesia bovis T2Bo]
 gi|154797765|gb|EDO06944.1| ATP synthase F1 beta chain, putative [Babesia bovis]
          Length = 514

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 146/280 (52%), Gaps = 28/280 (10%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLCHG 161
           GR++N  G P+DG   +   D     + +   + + QR ++    TGI+V+D+  P   G
Sbjct: 121 GRIMNVTGDPLDGCGPIP--DSKRLSIHREAVSFSDQRTDEALLITGIKVVDLLAPYAKG 178

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
            +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE  E   + +   +  
Sbjct: 179 GKIGLFGGAGVGKTVLIMELINNVAKKHGGFS--VFAGVGERTREGNELYHEMMETGVIK 236

Query: 215 -------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
                         K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 237 RRQLEDGTFDFSGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIY 296

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+ 
Sbjct: 297 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGALQERI--TTTNKGSITSVQAVYVPADDI 354

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            DP   +  S LD   VL+RS+AE G YP VDPL S SR+
Sbjct: 355 TDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRM 394


>gi|183206674|gb|ACC54535.1| ATP synthase beta subunit [Campanula rotundifolia]
          Length = 498

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|260431391|ref|ZP_05785362.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415219|gb|EEX08478.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 517

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 17/350 (4%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           +S   G V+ +  D + +  +G  +EIS+G+ V         P  +   GRV++ALG P+
Sbjct: 65  SSGATGIVLDLESDRLGVVLLGGADEISVGEAVRRTRSVLSVPVGSALLGRVVDALGAPL 124

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D D      D  + + +  P  ++R+ V++   TG++VID   P+  GQR  +      G
Sbjct: 125 D-DGPPVDTDFRLPVETDAPAILDREAVQRPLATGLKVIDAAVPIGLGQRQLIIGDRQTG 183

Query: 174 KS-----TLLSMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSD 225
           K+     T+L+   R   F   I   VG+RG  V + +   ED  GD +  S+V+ A  +
Sbjct: 184 KTSIAIDTILNQKQRG-VF--CIYCAVGQRGDAVAKVVGALED--GDAMANSIVISAGDE 238

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           + P L  +AP  A+T+A +FS +G +VL+++D +T  A + RE++      P    YP  
Sbjct: 239 DPPGLAYVAPFAAMTMARHFSDQGRDVLVVMDDLTHHARAYRELSLLLRRPPGREAYPGD 298

Query: 286 VFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           +F    RLLER G        G+IT +  V    +N +  I  ++ SI DG + L+    
Sbjct: 299 IFYLHARLLERAGNFADAAGGGSITVLPVVETQAENLSAYIPTNLISITDGQVYLSPRQV 358

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            + ++P VD   SVSR+  KA SA  + +  +L   + +FEE  D    G
Sbjct: 359 RKNQFPAVDLGVSVSRVGGKAQSAAFRDVAGNLRVTLSQFEELEDFVRFG 408


>gi|306821773|ref|ZP_07455369.1| V-type ATP synthase, subunit B [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550242|gb|EFM38237.1| V-type ATP synthase, subunit B [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 459

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 18/341 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GDDSLGKGDLSME 127
           +V +     G  +S   + F      ++ S    GRV + LG+PID G + L +  + + 
Sbjct: 53  LVQLFESSTGINLSDSKVRFLGRSMELAVSPDMLGRVFDGLGRPIDDGPEILPEKRVDIN 112

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---- 183
            +   P A  R   ++  +TG+  ID    L  GQ++ +F+ SG+  S L +  AR    
Sbjct: 113 GVPINPAA--RDYPQEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHSRLAAQIARQAQV 170

Query: 184 ---SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
              +D F  V+ + +G    E   F E +     L+++V+ V  +++  + R   P  A+
Sbjct: 171 RGTTDPF-AVVFAAMGITFEEANYFTESFKDTGALERTVMFVNLANDPAVERISTPRMAL 229

Query: 240 TIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T AEY +  +G +VL+IL  IT +A S+RE++    E+P  RGYP  ++++L  + ER G
Sbjct: 230 TAAEYLAFDQGMHVLVILTDITNYADSLREVSAARKEVPGRRGYPGYMYTDLATMYERAG 289

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  KG+IT +  + +  D+   PI D    I +G I+L+R L  +   PPVD L S+S
Sbjct: 290 RKKGSKGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYRQNLTPPVDVLPSLS 349

Query: 359 RLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           RL DK        AD    ++ L     R +E +++ ++ G
Sbjct: 350 RLKDKGIGEGKTRADHADTMNQLFAAYARGKEAKELMVVLG 390


>gi|296217690|ref|XP_002755124.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like
           [Callithrix jacchus]
          Length = 529

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHTEAPEFMEMNVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I  F  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFGFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+ ++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 377 AHLDATTVLSCAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436

Query: 389 IRLIGG 394
           I  I G
Sbjct: 437 IIAILG 442


>gi|238060776|ref|ZP_04605485.1| F0F1 ATP synthase subunit beta [Micromonospora sp. ATCC 39149]
 gi|237882587|gb|EEP71415.1| F0F1 ATP synthase subunit beta [Micromonospora sp. ATCC 39149]
          Length = 485

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 158/306 (51%), Gaps = 23/306 (7%)

Query: 103 GRVINALGK--------PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           G V NA+G+         +  DD  G       I  K P   + +   +  +TGI+VID+
Sbjct: 105 GHVFNAIGECLNLTEGETLSPDDHWG-------IHRKAPAFADLEPKTEMLETGIKVIDL 157

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLG 211
             P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + I +   
Sbjct: 158 LAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTE 217

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
              + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I RF  +  E+
Sbjct: 218 SGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNIFRFTQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D++ DP   +  
Sbjct: 278 STLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADDYTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  ++ ++++ +D
Sbjct: 336 AHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKRILQKYKDLQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|254483182|ref|ZP_05096415.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2148]
 gi|214036553|gb|EEB77227.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2148]
          Length = 489

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 16/339 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +S G  V + G     P      GR+++ LG PID    +G+ + +  
Sbjct: 73  VVRAIAMGSSEGVSRGLAVENTGAPISVPVGIETLGRIMDVLGNPIDECGPIGEQERAA- 131

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   
Sbjct: 132 IHRKAPTYEELSASDELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAT 191

Query: 188 DKVIISL---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPL 236
           +   +S+   VGER RE  +F  +    N+         K  +V    +E P  R    L
Sbjct: 192 EHSGLSVFAGVGERTREGNDFYFEMQESNVVDVENFSNSKVAMVYGQMNEPPGNRLRVAL 251

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ER
Sbjct: 252 TGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER 311

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S
Sbjct: 312 I--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAARGIYPAVDPLDS 369

Query: 357 VSRLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            SR  D      D  +    +  ++ R++E +DI  I G
Sbjct: 370 TSRQLDPLIIGNDHYETARGVQSVLQRYKELKDIIAILG 408


>gi|4063550|gb|AAC98333.1| ATP synthase beta subunit [Helianthemum grandiflorum]
          Length = 456

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 156/307 (50%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+ +D   SLG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 78  GVTLGRIFNVLGETVD---SLGPVDTGTTAPIHKPAPAFIQLETKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A+S     V    VGER RE  +   +    
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFAG-VGERTREGNDLYMEMKES 193

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                +NL KS V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 194 GVINEENLSKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 253

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 254 QAGSEVSALLGRIPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 311

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R
Sbjct: 312 APATTFAHLDATTVLSRPLASKGIYPAVDPLDSKSTMLQPRIVGDEHYETAQQVKQTLQR 371

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 372 YKELQDI 378


>gi|288799877|ref|ZP_06405336.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333125|gb|EFC71604.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 508

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 162/334 (48%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR++N +GKPIDG ++L     +ME    + + PP  +    +K    TGI+VID+  P 
Sbjct: 95  GRMLNVIGKPIDGMETL-----NMEGAYPIHREPPKFSELSTKKEMLATGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L     
Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVI 209

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247
             G+  KK++                     +V    +E P  R    L+ +T+AE F  
Sbjct: 210 KYGEKFKKAMEEGKWDLSLVDKEELKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269

Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            G       +++L +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 270 HGGKDGEAADIMLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGVMQERI--TS 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ 
Sbjct: 328 TKNGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D      E  +    +  ++ R++E +DI  I G
Sbjct: 388 DPLIVGKEHYQCAQRVKQILQRYKELQDIIAILG 421


>gi|312898813|ref|ZP_07758201.1| ATP synthase F1, beta subunit [Megasphaera micronuciformis F0359]
 gi|310619975|gb|EFQ03547.1| ATP synthase F1, beta subunit [Megasphaera micronuciformis F0359]
          Length = 472

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 157/307 (51%), Gaps = 8/307 (2%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR+ N LG+ +D  D   K +    I    P   +     +  +TGI+V+D
Sbjct: 84  RVPVGQGVLGRIFNVLGEAVDKVDEPVKAEDYWPIHRPAPKFDDLSPTMEILETGIKVVD 143

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL 210
           +  P   G +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +  
Sbjct: 144 LIAPYAKGGKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFTGVGERTREGNDLWNEMK 203

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
               + K+ +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E
Sbjct: 204 ESGVISKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDKEHQDVLLFVDNIFRFIQAGSE 263

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   + 
Sbjct: 264 VSALLGRIPSAVGYQPTLGTDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAAT 321

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R +AE G YP VDPL S SR+ D     +E  +    +  ++ ++++ +
Sbjct: 322 FAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPHIIGEEHYETAREVQAILQKYKDLQ 381

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 382 DIIAILG 388


>gi|283794888|ref|YP_003359241.1| ATP synthase CF1 beta subunit [Cryptomonas paramecium]
 gi|253981860|gb|ACT46777.1| ATP synthase CF1 beta subunit [Cryptomonas paramecium]
          Length = 472

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 161/309 (52%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAM-NRQRVEKGFKTGIRVIDIFTPL 158
           GR+ N LG+ +D       G    E+M    + PP   + + +   F+TGI+VID+  P 
Sbjct: 91  GRIFNVLGQVVDA-----LGPFHSEVMLPIHRTPPFFTDLETMPCLFETGIKVIDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLG---- 211
             G +IG+F G+G+GK+ L+       +   + V + + +GER RE  +   + L     
Sbjct: 146 KRGGKIGLFGGAGVGKTVLIMELINNIAKAHNGVSVFAGIGERTREGNDLYNEMLESKVI 205

Query: 212 --DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
             +NL   K  +V    +E P  R    LTA+T+AEYF  S   +VLL +D+I RF  + 
Sbjct: 206 DLENLCNSKVTLVYGQMNEPPGARMRVGLTALTMAEYFRDSNKQDVLLFIDNIFRFVQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ SE+  L ERI  S KE G+IT++ +V V  D+  DP   
Sbjct: 266 AEVSALLGRMPSAVGYQPTLASEMGALQERI-VSTKE-GSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +  S LD   VL+R LA +G YP VDPL +S S L     S    +    + + + R++E
Sbjct: 324 TTFSHLDATTVLSRVLAAKGIYPSVDPLESSSSMLQPGIVSGLHYETAQRVRYTLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|324512115|gb|ADY45028.1| ATP synthase subunit beta [Ascaris suum]
          Length = 549

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 149/274 (54%), Gaps = 18/274 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  ++    ++   TGI+V+D+  P   G
Sbjct: 162 LGRIMNVIGEPIDERGPIPAKHFA-PIHAEAPAFVDMSVEQEILVTGIKVVDLLAPYAKG 220

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE    D 
Sbjct: 221 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDL 279

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            G+N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E
Sbjct: 280 KGNNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSE 338

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   + 
Sbjct: 339 VSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATT 396

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            + LD   VL+R +AE   YP VDPL S SR+ D
Sbjct: 397 FAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 430


>gi|317125555|ref|YP_004099667.1| ATP synthase F1 subunit beta [Intrasporangium calvum DSM 43043]
 gi|315589643|gb|ADU48940.1| ATP synthase F1 subcomplex beta subunit [Intrasporangium calvum DSM
           43043]
          Length = 489

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 146/273 (53%), Gaps = 8/273 (2%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184
           I  K P     +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+  M AR   
Sbjct: 134 IHRKAPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIARVAR 193

Query: 185 DCFDKVIISLVGERGREVREF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D     + + VGER RE  +  +E      L ++ +V    DE P  R    L+A+T+AE
Sbjct: 194 DHGGVSVFAGVGERTREGNDLMVEMEEAGVLGQTALVFGQMDEPPGTRLRVALSALTMAE 253

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   +  +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 254 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTRG 313

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
              +IT++ ++ V  D++ DP   +  + LD    L+R +A  G YP VDPL S SR+ D
Sbjct: 314 H--SITSMQAIYVPADDYTDPAPATTFAHLDATTELSRDIASMGIYPAVDPLTSTSRILD 371

Query: 363 KAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
             + + E    +  +  ++ R +E +DI  I G
Sbjct: 372 PRYVSQEHYSTAVRIRSILQRNKELQDIIAILG 404


>gi|307343732|emb|CBJ19283.1| atpD synthase beta subunit [Micromonospora sp. SG16]
          Length = 302

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    D  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQDHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|170293961|gb|ACB13074.1| ATP synthase beta subunit [Picocystis salinarum]
          Length = 366

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 160/314 (50%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           C  GR+ N LG+P+D    LG+   + ++ I    P  +        F+TGI+V+D+  P
Sbjct: 19  CTLGRIFNVLGQPVD---ELGEVTAESTLPIHRSAPAFVELDTKLSIFETGIKVVDLLAP 75

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 76  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 134

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 135 VISESNLSDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRF 192

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  D
Sbjct: 193 VQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKTGSITSIQAVYVPADDLTD 250

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R+LA +G YP VDPL S S +  + W   E+      S+   +
Sbjct: 251 PAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYSCAQSVKQTL 309

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 310 QRYKELQDIIAILG 323


>gi|312880231|ref|ZP_07740031.1| H(+)-transporting two-sector ATPase [Aminomonas paucivorans DSM
           12260]
 gi|310783522|gb|EFQ23920.1| H(+)-transporting two-sector ATPase [Aminomonas paucivorans DSM
           12260]
          Length = 471

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 174/350 (49%), Gaps = 16/350 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I  D  +V +     G ++    + F      +  S    GR+ N  G+PIDG  
Sbjct: 43  GRVLEITADKALVQVFEGTTGIDVDTTQVRFLGKVLTLPVSGDMLGRIFNGRGEPIDGGA 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           ++   + +++I        +R    +  +TGI  ID   PL  GQ++ +F+GSG+  + +
Sbjct: 103 AIIP-ETALDINGFPMNPFSRDYPSEFIQTGISTIDGMNPLVRGQKLPIFSGSGLPHNRM 161

Query: 178 LSMFARSDCF------DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR            V+ + +G    E   F+ED+     ++++V+ V  +D+  I 
Sbjct: 162 AAQIARQATVISGHAAFAVVFAAMGITFEEASFFMEDFRKTGAIERTVMFVNLADDPAIE 221

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D +VL+IL  +T +  ++REI+    E+P  RGYP  ++++
Sbjct: 222 RITTPRLALTCAEYLAFEKDMHVLVILTDLTNYCEALREISAARKEVPGRRGYPGYLYTD 281

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  + ER G    + G+IT    + +  D+   PI D    I +G I+L+R L  +G YP
Sbjct: 282 LATMYERAGRLRGKSGSITQFPILTMPEDDKTHPIPDLTGYITEGQIILSRGLHRKGIYP 341

Query: 350 PVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDIRLIGG 394
           PVD + S+SRL DK         D   L++ L     R +E +++ +I G
Sbjct: 342 PVDVMPSLSRLKDKGIGKGKTREDHADLMNQLFAAYARGKEAKELAVILG 391


>gi|256387189|gb|ACU80595.1| ATP synthase beta subunit [Childia trianguliferum]
          Length = 338

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 156/306 (50%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN +G+PID    L      + I    PP +     ++  +TGI+V+D+  P   G
Sbjct: 23  LGRIINVIGEPIDERGPL-NAKRRLPIHQDAPPFVEMSVEQENLETGIKVVDLLAPYAKG 81

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210
            +IG+F G+G+GK+ L+    +  A++      + + VGER RE  +   +        L
Sbjct: 82  GKIGLFGGAGVGKTVLIMELIANVAKAHG-GYAVFAGVGERTREGNDLYHEMIAGGVISL 140

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AE F   +G +VLL +D+I RF  +  E+
Sbjct: 141 KDKSSKVSLVYGQMNEPPGARARVALTGLTVAENFRDHEGQDVLLFVDNIFRFTQAGSEV 200

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  
Sbjct: 201 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTTKGSITSVQAIFVPADDLTDPAPATTF 258

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R ++E G YP VD L S SR+ D     +E   +   +  ++  ++  +D
Sbjct: 259 AHLDATTVLSRGISELGIYPAVDLLDSTSRIMDFNIVGEEHYNIARGVQKILQDYKSLQD 318

Query: 389 IRLIGG 394
           I  I G
Sbjct: 319 IIAILG 324


>gi|330834231|ref|YP_004408959.1| V-type ATP synthase subunit B [Metallosphaera cuprina Ar-4]
 gi|329566370|gb|AEB94475.1| V-type ATP synthase subunit B [Metallosphaera cuprina Ar-4]
          Length = 466

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 166/323 (51%), Gaps = 20/323 (6%)

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           +G  V   GR   +  S    GR+ N LG P+D    + KG+        + PA  R   
Sbjct: 71  VGTTVRFLGRGLEVKISEEMLGRIFNPLGDPLDNGPMVIKGERRDINGEPINPA-TRDYP 129

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLV 195
           E+  +TGI  ID    L  GQ++ +F+GSG+  + L +  A+            V+   +
Sbjct: 130 EEFIQTGISAIDGLNSLLRGQKLPIFSGSGLPANALAAQIAKQATVRGEESNFAVVFGAI 189

Query: 196 GERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-N 251
           G R  E    R+F E+    N  +  ++++ ++E P+++ + P TA+T+AEY + + D +
Sbjct: 190 GVRYDEALFFRKFFEETGAIN--RVALIMSLANEPPVMKTLTPKTALTLAEYLAFEQDMH 247

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL IL  +T +  ++REI+ +  E+P   GYP  ++++L +  ER G    +KG+IT + 
Sbjct: 248 VLAILIDMTNYCEALREISASKEEVPGRGGYPGYMYTDLAQTYERAGKVVGKKGSITQMP 307

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSA 367
            + +  D+   PI D    I +G I L+R+L  +G YPP++ L S+SRLA     +  + 
Sbjct: 308 ILTMPNDDITHPIPDLTGYITEGQITLDRNLYNKGIYPPINVLMSLSRLAKDGIGEGKTR 367

Query: 368 DEKKLVSSLTHLIHRFEETRDIR 390
           D+ K VS+   L   + +  D R
Sbjct: 368 DDHKDVSN--QLFASYAKAVDTR 388


>gi|332652363|ref|ZP_08418108.1| V-type sodium ATPase, B subunit [Ruminococcaceae bacterium D16]
 gi|332517509|gb|EGJ47112.1| V-type sodium ATPase, B subunit [Ruminococcaceae bacterium D16]
          Length = 458

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 17/324 (5%)

Query: 61  QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           +V+ +N D  +V +     G  ++   + F     +++ S    GRV N +G+PIDG   
Sbjct: 43  KVLEVNGDSAVVQLFENSAGINLAQSKIRFLGHPLQLAVSGDMLGRVFNGMGEPIDG--- 99

Query: 119 LGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            G   L+ E       AMN   R    +  +TGI  ID    L  GQ++ +F+GSG+  +
Sbjct: 100 -GPAILADEYRDINGLAMNPAARNYPNEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHA 158

Query: 176 TLLSMFAR-SDCFD-----KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
            L +  AR +   D      V+ + +G    E   F+ ++     + ++V+    +++  
Sbjct: 159 ALAAQIARQAKVLDGESNFAVVFAAIGITFEESEFFVSEFKRTGAIDRTVLFTNLANDPA 218

Query: 229 ILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           + R   P  A+T AEY +  K  +VL+IL  IT +A ++REI+    E+P  RGYP  ++
Sbjct: 219 VERIATPRMALTAAEYLAFEKNMHVLVILTDITNYAEALREISAAKKEVPGRRGYPGYLY 278

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++L  + ER G    ++G+IT +  + +  D+   PI D    I +G I+L+R L   G 
Sbjct: 279 TDLATMYERAGRQMGKEGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYRRGV 338

Query: 348 YPPVDPLASVSRLADKAWSADEKK 371
            PPVD L S+SRL DK   A + +
Sbjct: 339 NPPVDVLPSLSRLKDKGTGAGKTR 362


>gi|297618720|ref|YP_003706825.1| H(+)-transporting two-sector ATPase [Methanococcus voltae A3]
 gi|297377697|gb|ADI35852.1| H(+)-transporting two-sector ATPase [Methanococcus voltae A3]
          Length = 464

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 148/277 (53%), Gaps = 13/277 (4%)

Query: 94  RISPSACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           ++  S    GRV +  GKPID G + + +  + +      P  ++R       +TGI  I
Sbjct: 83  KLGVSNDMLGRVFDGAGKPIDKGPEIISEEKIDINGSPLNP--VSRASPNAFVQTGISTI 140

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREF 205
           D    L  GQ+I +F+GSG+  + L +  AR        + F  V+ + +G    E   F
Sbjct: 141 DGTNTLVRGQKIPIFSGSGLPHNMLAAQIARQAKVRGEGEQF-AVVFAAMGITSEESNYF 199

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263
           IE++     L+K+VV +  +D+  I R + P  A+T AEY +  KG +VL+IL  +T + 
Sbjct: 200 IEEFRKTGALEKAVVFINLADDPAIERIITPRIALTTAEYLAYEKGMHVLVILTDLTNYC 259

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++REIA    E+P  RGYP  ++++L  L ER G  + ++G +T +  + +  D+   P
Sbjct: 260 EALREIAAARNEVPGRRGYPGYMYTDLASLYERAGRVKGKQGTVTQIPILTMPHDDITHP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           I D    I +G IVL+R L  +G YPPVD L S+SRL
Sbjct: 320 IPDLTGYITEGQIVLSRELNMKGVYPPVDVLPSLSRL 356


>gi|323496906|ref|ZP_08101934.1| F0F1 ATP synthase subunit beta [Vibrio sinaloensis DSM 21326]
 gi|323317980|gb|EGA70963.1| F0F1 ATP synthase subunit beta [Vibrio sinaloensis DSM 21326]
          Length = 467

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + +  I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGDIG-AEETYSIHREAPSYEEQSNEIALLETGVKVIDLVCPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +   
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR+ D      E   +   +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|332285686|ref|YP_004417597.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
 gi|330429639|gb|AEC20973.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
          Length = 473

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 157/305 (51%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   ++   I    P         +  +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDERGPIDSEEVRA-IHQDAPKFDELSPSVELLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           ++G+F G+G+GK+     L++  A++     V    VGER RE  +F  +         D
Sbjct: 150 KVGLFGGAGVGKTVNMLELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMAEAGVIKMD 208

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           NLK+S V  V    +E P  R    L+ +T+AE F  +G ++L  +D+I R+  +  E++
Sbjct: 209 NLKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVS 268

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +   
Sbjct: 269 ALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 326

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RDI
Sbjct: 327 HLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDI 386

Query: 390 RLIGG 394
             I G
Sbjct: 387 IAILG 391


>gi|218290061|ref|ZP_03494228.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239895|gb|EED07083.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 467

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 164/327 (50%), Gaps = 16/327 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID    + +      I    P   +     + F+TGI+V+D+  P   G
Sbjct: 88  LGRIFNVLGETIDEKGPV-QAAQRWPIHRPAPAFGDLTTKTEIFETGIKVVDLLAPYVKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +     + + VGER RE  +   +      L K+
Sbjct: 147 GKVGLFGGAGVGKTVLIQELIHNIAKEHGGYSVFAGVGERTREGNDLYHEMKESGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+ +T+AEYF   +  +VL  +D+I RF  +  E++   G +
Sbjct: 207 CMVFGQMNEPPGARLRVALSGLTLAEYFRDVEQRDVLFFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   +G+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--ASTVRGSITSIQAVYVPADDYTDPAPANTFTHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGY 395
           VL R +A+ G YP VDPLAS SR        +E   V+  +  ++ R+ E +DI  I G 
Sbjct: 325 VLERRIADMGLYPAVDPLASTSRALQPDIVGEEHYQVARGVQAVLQRYRELQDIIAILGM 384

Query: 396 RPGVD---LILDKAVHQVPIIYDFLKQ 419
               D   LI+ +A      I +FL Q
Sbjct: 385 DELTDEDRLIVSRARK----IQNFLSQ 407


>gi|46909237|gb|AAT06136.1| ATP synthase beta subunit [Ephydatia cooperensis]
          Length = 427

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 147/276 (53%), Gaps = 16/276 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR++N +G+PID    +   +    I ++ P  +     ++   TGI+V+D+  P 
Sbjct: 61  AKTLGRIMNVIGEPIDERGPI-LSEKKAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPY 119

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY----- 209
             G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +      
Sbjct: 120 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIVSKV 178

Query: 210 --LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  + 
Sbjct: 179 ISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 238

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  + ER   +  +KG+IT+V ++ V  D+  DP   
Sbjct: 239 SEVSALLGRIPSAVGYQPTLATDMGTMQERT--TTTKKGSITSVQAIYVPADDLTDPAPA 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +  + LD   VL+R+++E G YP VDPL S SR+ D
Sbjct: 297 TTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMD 332


>gi|183206636|gb|ACC54516.1| ATP synthase beta subunit [Siphocodon debilis]
          Length = 472

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 175/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGQDTLGQPINVTCEVQQLLGNNRVRAVSMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 92  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKASGVINEQ 207

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYKELQD 385

Query: 389 IRLIGG 394
           I  I G
Sbjct: 386 IITILG 391


>gi|168186669|ref|ZP_02621304.1| V-type ATP synthase beta chain [Clostridium botulinum C str.
           Eklund]
 gi|169295344|gb|EDS77477.1| V-type ATP synthase beta chain [Clostridium botulinum C str.
           Eklund]
          Length = 460

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 154/285 (54%), Gaps = 15/285 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GRV + +G+P DG   +    + D++ E ++      +R    +  +TGI  ID 
Sbjct: 82  SEDMLGRVFDGMGRPKDGGPKIIPEERRDINGEPLN----PFSRDYPSEFIQTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIED 208
              L  GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E + FI+D
Sbjct: 138 LNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLGSDSKFAVVFAAMGITFEEAQFFIQD 197

Query: 209 YLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +    ++ ++V+ +  +++  + R   P  A+T AE+ +  KG +VL+I+  +T +A ++
Sbjct: 198 FTKTGSIDRTVLFMNLANDPAVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   PI D
Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
               I +G I+L+R L ++G  PP+D L S+SRL DK    D+ +
Sbjct: 318 LTGYITEGQIILSRELYKKGIMPPIDVLPSLSRLKDKGIGKDKTR 362


>gi|269101119|ref|YP_003289267.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus]
 gi|266631627|emb|CAV31298.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus]
 gi|270118757|emb|CAT18848.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus]
          Length = 481

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D D S   G+ ++ I    P   + +     F+TGI+V+D+  P   G
Sbjct: 96  LGRIFNVLGQPVD-DLSASVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRG 154

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V+ 
Sbjct: 155 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVIN 212

Query: 222 ATS-------------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             S             +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 213 EKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 272

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 273 EVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTNQGSITSIQAVYVPADDLTDPAPAT 330

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       DE  K    +   + R++E 
Sbjct: 331 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKEL 390

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 391 QDIIAILG 398


>gi|254874081|ref|ZP_05246791.1| atpD, ATP synthase beta chain [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254840080|gb|EET18516.1| atpD, ATP synthase beta chain [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 372

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 155/296 (52%), Gaps = 12/296 (4%)

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRI 164
           +N LG+PID    +   +     + + PPA +   +     +TGI+V+D+  P   G ++
Sbjct: 1   MNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAKGGKV 58

Query: 165 GVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K  +
Sbjct: 59  GLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLDKVSL 117

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V    +E P  R    L+ +TIAE F  +  +VL+ +D+I R+  +  E++   G +P A
Sbjct: 118 VYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSA 177

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD  IVL+
Sbjct: 178 VGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLS 235

Query: 340 RSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           R +AE G YP VDPL S SR  D      D  +   ++  ++ R++E +DI  I G
Sbjct: 236 RQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 291


>gi|72162806|ref|YP_290463.1| F0F1 ATP synthase subunit beta [Thermobifida fusca YX]
 gi|118573772|sp|Q47M82|ATPB_THEFY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71916538|gb|AAZ56440.1| ATP synthase F1, beta subunit [Thermobifida fusca YX]
          Length = 480

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 161/296 (54%), Gaps = 16/296 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158
           G V NALG+P D    + K +L ++    + +  PA ++   + +   TGI+VID+ TP 
Sbjct: 102 GHVFNALGEPQD----IPKSELQVKEYWPIHRPAPAFDQLEAKTEMLVTGIKVIDLLTPY 157

Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+  M  R +  F  V + + VGER RE  + F+E      L
Sbjct: 158 VRGGKIGLFGGAGVGKTVLIQEMITRIARNFGGVSVFAGVGERTREGTDLFLEMQEMGVL 217

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
             + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  
Sbjct: 218 PDTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD
Sbjct: 278 GRMPSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLD 335

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
               L+R ++++G YP VDPL S SR+ D  +   E  ++   +  ++ R  + +D
Sbjct: 336 ATTELSRPISQKGIYPAVDPLTSTSRILDPQYVGQEHYEVAQRVKEILQRNHDLQD 391


>gi|260774524|ref|ZP_05883437.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14]
 gi|260610430|gb|EEX35636.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14]
          Length = 467

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + +  I    P    +    +  +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDERGEIG-AEETYSIHRLAPSYEEQSNSTELLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +     
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNIEK 204

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   V+  +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQSTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|146271661|emb|CAL25312.1| atpD beta synthase chain [Pseudomonas koreensis]
          Length = 284

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 7/250 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 36  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 95

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 96  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 155

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 156 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 213

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      D       + ++
Sbjct: 214 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQYV 273

Query: 380 IHRFEETRDI 389
           + R++E +DI
Sbjct: 274 LQRYKELKDI 283


>gi|29336977|sp|Q9MTG8|ATPB_RAPSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|8052352|emb|CAB92327.1| ATPase beta subunit [Raphanus sativus]
          Length = 498

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214
           +IG+F G+G+GK++L+    +  A++     V   +  ER RE     +E  E  + + L
Sbjct: 167 KIGLFGGAGVGKTSLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEL 225

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 NLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|268619096|gb|ACZ13324.1| ATP synthase beta chain [Bursaphelenchus xylophilus]
          Length = 533

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 18/277 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+IN +G+PID    +   + +  I +  P  +     ++   TGI+V+D+  P 
Sbjct: 145 AETLGRIINVIGEPIDERGPIPTQNFA-PIHADAPEFVEMSVEQEILVTGIKVVDLLAPY 203

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE--- 207
             G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE   
Sbjct: 204 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGV 262

Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            D  G N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 263 IDLKGKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 321

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 322 GSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTKKGSITSVQAIYVPADDLTDPAP 379

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +  + LD   VL+R +AE   YP VDPL S SR+ D
Sbjct: 380 ATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 416


>gi|313837674|gb|EFS75388.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL037PA2]
 gi|314972613|gb|EFT16710.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL037PA3]
          Length = 489

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 9/269 (3%)

Query: 133 PPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFD 188
           PP  +    E +  +TGI+V+D+ TP   G +IG+F G+G+GK+ L+  M  R   +   
Sbjct: 138 PPTFDDLEPETEMLETGIKVLDLLTPYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGG 197

Query: 189 KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  + I +      LK + +V    DE P  R    LT +T+AEYF  
Sbjct: 198 TSVFAGVGERTREGNDLINEMDEAGVLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRD 257

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF+ +  E++T  G +P A GY  ++  E+ +L ERI  +     +
Sbjct: 258 VQNQDVLLFIDNIFRFSQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHS 315

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ +V V  D++ DP   +  + LD    L+R +A  G YP VDPL S SR+ D  + 
Sbjct: 316 ITSMQAVYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLTSTSRILDPLYV 375

Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             E     + +  ++ R +E +DI  I G
Sbjct: 376 GQEHYDTATQVKQILQRNKELQDIIAILG 404


>gi|164566109|gb|ABY61197.1| ATP synthase beta subunit [Danaea media]
          Length = 394

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|326335856|ref|ZP_08202035.1| ATP synthase F1 sector beta subunit [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692000|gb|EGD33960.1| ATP synthase F1 sector beta subunit [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 504

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G+  + I    P   +   V +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDGIDGLGNLPKSGENGLPIHRPAPKFEDLSTVTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIRYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D                        K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DEFMHSMEEGGWDLSKVDKKALKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 270 EEEGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +  +    +  L+  ++E +DI  I G
Sbjct: 388 LGKEHYECAQRVKELLQHYKELQDIIAILG 417


>gi|307343614|emb|CBJ19224.1| atpD synthase beta subunit [Micromonospora chokoriensis]
          Length = 302

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    D  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQDHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|78779915|ref|YP_398027.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9312]
 gi|118573719|sp|Q318V4|ATPB_PROM9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78713414|gb|ABB50591.1| ATP synthase F1 subcomplex beta subunit [Prochlorococcus marinus
           str. MIT 9312]
          Length = 486

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVKTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|194333718|ref|YP_002015578.1| F0F1 ATP synthase subunit beta [Prosthecochloris aestuarii DSM 271]
 gi|194311536|gb|ACF45931.1| alternate F1F0 ATPase, F1 subunit beta [Prosthecochloris aestuarii
           DSM 271]
          Length = 493

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 155/294 (52%), Gaps = 13/294 (4%)

Query: 104 RVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ +  G PID G+   G   +    + + PP+++R+      F+TGI++ID+ TPL  G
Sbjct: 97  RMFDVFGNPIDRGEPPEG---VQWRPVHRNPPSLSRRSTHSEVFQTGIKIIDLLTPLERG 153

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217
            + G+F G+G+GK+ LL+    +       +S+   +GER RE  E   +      L   
Sbjct: 154 GKSGLFGGAGVGKTVLLTEMIHNMVSHHRGVSIFCGIGERCREGEELYREMKAAGVLDNM 213

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  EI+   G++
Sbjct: 214 VMVFGQMNEPPGSRFRVGHAALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEISGMMGQM 273

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ +EL +L ERI  +    G+IT++ +V V  D+  DP A    S L   I
Sbjct: 274 PSRLGYQPTMGTELSKLEERI--ANTGTGSITSIQAVYVPADDFTDPAAVHTFSHLSSSI 331

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+R  A EG +P VDPL SVS++A           L   +  ++ ++ E +DI
Sbjct: 332 VLSRKRAGEGLFPAVDPLQSVSKMASPTGIGHRHYNLSRDIRKVLAQYNELKDI 385


>gi|293603080|ref|ZP_06685514.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC
           43553]
 gi|292818474|gb|EFF77521.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC
           43553]
          Length = 467

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I    P         +  +TGI+VID+  P   G 
Sbjct: 92  GRIMDVLGRPIDEAGPI-QHEEKRGIHQSAPRFDELSPSVELLETGIKVIDLVCPFAKGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 209

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RDI  I G
Sbjct: 328 LSRDIASLGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 385


>gi|156530127|gb|ABU75160.1| AtpB [Eurycoma apiculata]
          Length = 498

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   S  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTSSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|183206522|gb|ACC54459.1| ATP synthase beta subunit [Triodanis coloradoensis]
          Length = 477

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++     
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKXHGGVSVFGGVGERTREGNDLYKEMKDSG 199

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 200 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSAXLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R+
Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIITILG 388


>gi|146271653|emb|CAL25308.1| atpD beta synthase chain [Pseudomonas reinekei]
 gi|146271659|emb|CAL25311.1| atpD beta synthase chain [Pseudomonas jessenii]
          Length = 284

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 7/250 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 36  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 95

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 96  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 155

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 156 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 213

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      D       + ++
Sbjct: 214 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQYV 273

Query: 380 IHRFEETRDI 389
           + R++E +DI
Sbjct: 274 LQRYKELKDI 283


>gi|119350545|gb|ABL63223.1| AtpB [Selenastrum capricornutum]
          Length = 387

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 36  ATLGRIFNVLGEPVD---ELGPVKNEATLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 92

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 93  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 152

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF 
Sbjct: 153 IVEKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFV 210

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 211 QAGAEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDP 268

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   +K       +   + 
Sbjct: 269 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGDKHYDCAQRVKITLQ 327

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 328 RYKELQDIIAILG 340


>gi|2623222|gb|AAB86421.1| ATP synthase beta-subunit [Mus musculus]
          Length = 529

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 148/280 (52%), Gaps = 16/280 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGE+ RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGEKTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P       LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGAPTRVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + LD   VL+R++AE G YP VDPL S SR+ D     +E
Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNE 416


>gi|83746948|ref|ZP_00943994.1| ATP synthase beta chain [Ralstonia solanacearum UW551]
 gi|300702513|ref|YP_003744113.1| ATP synthase, f1 sector subunit beta [Ralstonia solanacearum
           CFBP2957]
 gi|83726368|gb|EAP73500.1| ATP synthase beta chain [Ralstonia solanacearum UW551]
 gi|299070174|emb|CBJ41465.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           CFBP2957]
          Length = 469

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 18/302 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR+++ LG+PID       G ++ E    I  K P            +TGI+VID+  P 
Sbjct: 94  GRIMDVLGRPIDE-----AGPIACEEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPF 148

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N 
Sbjct: 149 AKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNV 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   
Sbjct: 208 LDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALL 267

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD
Sbjct: 268 GRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLD 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VL+R +A  G YP VDPL S SR  D      E  ++   +   + R++E RDI  I
Sbjct: 326 STVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAI 385

Query: 393 GG 394
            G
Sbjct: 386 LG 387


>gi|114561|sp|P26532|ATPB_PYLLI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|14181|emb|CAA42899.1| beta subunit of ATPase [Pylaiella littoralis]
          Length = 481

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
              GR+ N LG+P+D   DS+G+   ++ I    P   + +     F+TGI+V+D+  P 
Sbjct: 94  ATLGRIFNVLGQPVDNLSDSVGED--TLPIHRSAPAFTDLETKPAIFETGIKVVDLLAPY 151

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S 
Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESG 209

Query: 219 VVVATS-------------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           V+  T+             +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 210 VINETNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  K    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|311103598|ref|YP_003976451.1| ATP synthase F1 subunit beta [Achromobacter xylosoxidans A8]
 gi|310758287|gb|ADP13736.1| ATP synthase F1, beta subunit [Achromobacter xylosoxidans A8]
          Length = 466

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I    P         +  +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEAGPI-QHEEKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 269 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RDI  I G
Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 384


>gi|227487993|ref|ZP_03918309.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542635|ref|ZP_03972684.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227092084|gb|EEI27396.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181833|gb|EEI62805.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 480

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +  LG+      I    PP    +   +  +TGI+VID+ TP   G 
Sbjct: 100 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFSELEGKTEILETGIKVIDLLTPYVKGG 158

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + S VGER RE  + F+E      L+ + 
Sbjct: 159 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFSGVGERTREGTDLFLEMEEMGVLQDTA 218

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 219 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 278

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD    
Sbjct: 279 SAVGYQPTLADEMGILQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 336

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP V+PL S SR+ + +   +    V+  +  ++ + +E +DI  I G
Sbjct: 337 LDRGIASKGIYPAVNPLTSTSRILEPSIVGERHYNVAQRVIGILQKNKELQDIIAILG 394


>gi|269103803|ref|ZP_06156500.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163701|gb|EEZ42197.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 468

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 162/333 (48%), Gaps = 16/333 (4%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +  G  V + GR   +       GR++N LG  ID    +G+ +    I    P
Sbjct: 58  MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGDAIDERGDIGEEE-RYAIHRAAP 116

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +       +S
Sbjct: 117 SYEEQSNTTEMLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAIQHSGLS 176

Query: 194 L---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   VGER RE  +F  +     +         K  +V    +E P  R    LT +T+A
Sbjct: 177 VFAGVGERTREGNDFYFEMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMA 236

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  
Sbjct: 237 EKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D
Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                 E   +   +  ++ R++E +DI  I G
Sbjct: 355 PLVVGQEHYDIARGVQSILQRYKELKDIIAILG 387


>gi|168040544|ref|XP_001772754.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675979|gb|EDQ62468.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 553

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 152/279 (54%), Gaps = 26/279 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+ ID      +GD+S E    I  + P  +++    +  +TGI+V+D+ 
Sbjct: 162 ATLGRIINVIGEAIDE-----RGDISREHVLGIHREAPAFVDQGTEMEILETGIKVVDLL 216

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207
            P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     +E IE
Sbjct: 217 APYQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGFSVFAG-VGERTREGNDLYKEMIE 275

Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
                LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VL  +D+I R
Sbjct: 276 SGVIKLGDKQMESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLFFIDNIFR 335

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 336 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTQKGSITSVQAIYVPADDLT 393

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 394 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 432


>gi|94266419|ref|ZP_01290114.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1]
 gi|93452961|gb|EAT03460.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1]
          Length = 358

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 143/271 (52%), Gaps = 9/271 (3%)

Query: 131 KVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           K  P    Q  E    +TGI+VID+  P   G ++G+F G+G GK+ ++     +     
Sbjct: 5   KPAPLFTEQDTEVHVLETGIKVIDLLVPFPRGGKMGLFGGAGCGKTVIMMEMVNNIAMHH 64

Query: 190 VIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
             IS+   VGER RE  +   +      L K+ +V     E P  R    LT ++ AEYF
Sbjct: 65  GGISVFCGVGERTREGNDLYHEMKESGVLPKAALVYGQMTEPPGARSRVALTGLSAAEYF 124

Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
              +G +VLL +D+I RF  + +E++   G +P A GY  ++ ++L  L ERI  +   K
Sbjct: 125 RDEEGQDVLLFVDNIFRFTQAGQEVSALLGRIPSAVGYQPTLGTDLGGLQERI--TSTNK 182

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITAV  V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S SR+ D  
Sbjct: 183 GSITAVQCVYVPADDLTDPAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTSRILDPN 242

Query: 365 WSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394
              ++  LV+    + + ++++ +DI  I G
Sbjct: 243 VLGEDHYLVARGVQMTLQKYKDLQDIIAILG 273


>gi|14717944|gb|AAK72714.1| ATP synthase beta subunit [Asimina triloba]
          Length = 384

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 148/278 (53%), Gaps = 23/278 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGAVGERTREGNDLYM--EMKE 209

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    G NVLL +D+I RF
Sbjct: 210 SGVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGXNVLLFIDNIFRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  D
Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTD 327

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           P   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365


>gi|69245112|ref|ZP_00603236.1| Sodium-transporting two-sector ATPase [Enterococcus faecium DO]
 gi|257879674|ref|ZP_05659327.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,230,933]
 gi|257882670|ref|ZP_05662323.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,502]
 gi|257883979|ref|ZP_05663632.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,501]
 gi|257890340|ref|ZP_05669993.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,410]
 gi|257892948|ref|ZP_05672601.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,408]
 gi|260559664|ref|ZP_05831844.1| sodium-transporting two-sector ATPase [Enterococcus faecium C68]
 gi|261208729|ref|ZP_05923166.1| sodium-transporting two-sector ATPase [Enterococcus faecium TC 6]
 gi|289565587|ref|ZP_06446034.1| V-type ATP synthase subunit B [Enterococcus faecium D344SRF]
 gi|293553106|ref|ZP_06673744.1| V-type ATP synthase beta chain [Enterococcus faecium E1039]
 gi|293560066|ref|ZP_06676570.1| V-type ATP synthase beta chain [Enterococcus faecium E1162]
 gi|293568808|ref|ZP_06680122.1| V-type ATP synthase beta chain [Enterococcus faecium E1071]
 gi|293572464|ref|ZP_06683444.1| V-type ATP synthase beta chain [Enterococcus faecium E980]
 gi|294614383|ref|ZP_06694299.1| V-type ATP synthase beta chain [Enterococcus faecium E1636]
 gi|294617541|ref|ZP_06697171.1| V-type ATP synthase beta chain [Enterococcus faecium E1679]
 gi|294622742|ref|ZP_06701697.1| V-type ATP synthase beta chain [Enterococcus faecium U0317]
 gi|314938127|ref|ZP_07845432.1| ATP synthase ab [Enterococcus faecium TX0133a04]
 gi|314943833|ref|ZP_07850568.1| ATP synthase ab [Enterococcus faecium TX0133C]
 gi|314949791|ref|ZP_07853101.1| ATP synthase ab [Enterococcus faecium TX0082]
 gi|314951199|ref|ZP_07854257.1| ATP synthase ab [Enterococcus faecium TX0133A]
 gi|314994430|ref|ZP_07859714.1| ATP synthase ab [Enterococcus faecium TX0133B]
 gi|314995626|ref|ZP_07860720.1| ATP synthase ab [Enterococcus faecium TX0133a01]
 gi|68195955|gb|EAN10388.1| Sodium-transporting two-sector ATPase [Enterococcus faecium DO]
 gi|257813902|gb|EEV42660.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,230,933]
 gi|257818328|gb|EEV45656.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,502]
 gi|257819817|gb|EEV46965.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,501]
 gi|257826700|gb|EEV53326.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,410]
 gi|257829327|gb|EEV55934.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,408]
 gi|260074332|gb|EEW62654.1| sodium-transporting two-sector ATPase [Enterococcus faecium C68]
 gi|260077231|gb|EEW64951.1| sodium-transporting two-sector ATPase [Enterococcus faecium TC 6]
 gi|289162669|gb|EFD10522.1| V-type ATP synthase subunit B [Enterococcus faecium D344SRF]
 gi|291588525|gb|EFF20359.1| V-type ATP synthase beta chain [Enterococcus faecium E1071]
 gi|291592691|gb|EFF24284.1| V-type ATP synthase beta chain [Enterococcus faecium E1636]
 gi|291596147|gb|EFF27410.1| V-type ATP synthase beta chain [Enterococcus faecium E1679]
 gi|291597793|gb|EFF28930.1| V-type ATP synthase beta chain [Enterococcus faecium U0317]
 gi|291602697|gb|EFF32911.1| V-type ATP synthase beta chain [Enterococcus faecium E1039]
 gi|291605933|gb|EFF35363.1| V-type ATP synthase beta chain [Enterococcus faecium E1162]
 gi|291607526|gb|EFF36868.1| V-type ATP synthase beta chain [Enterococcus faecium E980]
 gi|313590214|gb|EFR69059.1| ATP synthase ab [Enterococcus faecium TX0133a01]
 gi|313591202|gb|EFR70047.1| ATP synthase ab [Enterococcus faecium TX0133B]
 gi|313596678|gb|EFR75523.1| ATP synthase ab [Enterococcus faecium TX0133A]
 gi|313597557|gb|EFR76402.1| ATP synthase ab [Enterococcus faecium TX0133C]
 gi|313642474|gb|EFS07054.1| ATP synthase ab [Enterococcus faecium TX0133a04]
 gi|313643864|gb|EFS08444.1| ATP synthase ab [Enterococcus faecium TX0082]
          Length = 458

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 15/317 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           GQV+ +  D  +V I     G  +    + F      +  S    GRV + LG+P D G 
Sbjct: 42  GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           + L +  L  +I  +V   + R   ++  +TGI  ID    L  GQ++ VF+GSG+    
Sbjct: 102 EILPEKHL--DINGEVINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 159

Query: 177 LLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           L +  AR       SD F  V+ + +G    E   F+ED+     + +SV+ +  +++  
Sbjct: 160 LAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPA 218

Query: 229 ILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R   P  A+T AEY +  KG +VL+I+  +T +A ++REI+    E+P  RGYP  ++
Sbjct: 219 IERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLY 278

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + L  L ER G     KG++T +  + +  D+   PI D    I +G I+L R L + G 
Sbjct: 279 TNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGI 338

Query: 348 YPPVDPLASVSRLADKA 364
            PP+D L S+SRL DK 
Sbjct: 339 QPPIDVLPSLSRLKDKG 355


>gi|51473969|ref|YP_067726.1| F0F1 ATP synthase subunit beta [Rickettsia typhi str. Wilmington]
 gi|81826277|sp|Q68VU8|ATPB_RICTY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|51460281|gb|AAU04244.1| ATP synthase [Rickettsia typhi str. Wilmington]
          Length = 474

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 17/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PIDG   +    +S  I    P  +N+        TGI+V+D+  P  
Sbjct: 86  ATLGRIMNVVGEPIDGKGEIKSSTIS-SIYKPAPDFINQSTERDILVTGIKVVDLLAPYT 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD---N 213
            G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +     N
Sbjct: 145 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVIN 204

Query: 214 LK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSI 266
           L+     K  +V    +E P  R    L+ +TIAE F   + G +VL  +D+I RF  + 
Sbjct: 205 LEAPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNIFRFTQAG 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP   
Sbjct: 265 AEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPS 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  +  ++  ++ 
Sbjct: 323 TSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKS 382

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 383 LQDIIAILG 391


>gi|19552435|ref|NP_600437.1| F0F1 ATP synthase subunit beta [Corynebacterium glutamicum ATCC
           13032]
 gi|21903378|sp|P42464|ATPB_CORGL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21323979|dbj|BAB98605.1| F0F1-type ATP synthase beta subunit [Corynebacterium glutamicum
           ATCC 13032]
          Length = 483

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 165/300 (55%), Gaps = 11/300 (3%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG  +D D SL    ++    + + PP+ ++ +   +  +TGI+VID+ TP   
Sbjct: 103 GHVFNALGDCLD-DVSLNNNPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVK 161

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ 
Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQD 221

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 222 TALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 281

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD  
Sbjct: 282 MPSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDAT 339

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
             L+RS+A +G YP V+PL S SR+ + A   +    VS  +  ++ + +E +DI  I G
Sbjct: 340 TELDRSIASKGIYPAVNPLTSTSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILG 399


>gi|170294003|gb|ACB13095.1| ATP synthase beta subunit [Chaetomorpha linum]
          Length = 366

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+ N +G+P+DG ++    + S+ I    P  ++       F+TGI+V+D+  P 
Sbjct: 18  ATTLGRIFNVVGQPVDGLENSAH-EKSLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPY 76

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 77  RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 136

Query: 212 --DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +NL   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 137 NENNLLDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 196

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 197 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 254

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LDG  VL+R LA +G YP VDPL S S +   +   +E      ++   + R++E
Sbjct: 255 TTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYNTARAVQSTLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|33594186|ref|NP_881830.1| F0F1 ATP synthase subunit beta [Bordetella pertussis Tohama I]
 gi|81836194|sp|Q7VU44|ATPB_BORPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33564261|emb|CAE43553.1| ATP synthase beta chain [Bordetella pertussis Tohama I]
 gi|332383600|gb|AEE68447.1| F0F1 ATP synthase subunit beta [Bordetella pertussis CS]
          Length = 466

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I    P         +  +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEAGPIAS-DEKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E  ++   +   + R++E RDI  I G
Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILG 384


>gi|161529198|ref|YP_001583024.1| V-type ATP synthase subunit B [Nitrosopumilus maritimus SCM1]
 gi|238686916|sp|A9A2Q9|VATB_NITMS RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|160340499|gb|ABX13586.1| Sodium-transporting two-sector ATPase [Nitrosopumilus maritimus
           SCM1]
          Length = 461

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 165/309 (53%), Gaps = 20/309 (6%)

Query: 102 CGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV + LG+P DG  D +   D  ++I  +      R+  +   +TG+ VID    L  
Sbjct: 90  LGRVFDGLGRPKDGLPDPIA--DQFIDINGEPMNPEQREYPKDFIQTGVSVIDGMITLVR 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+GSG+  + L +  AR        D F  V+ + +G +  E  E+    L ++
Sbjct: 148 GQKLPIFSGSGMSHNLLAAQIARQASVIGTQDDF-AVVFAAIGVQYSEA-EYFRRSLEES 205

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
             LK+SV+ + T+D+  I R + P  A+T+AEY + + G +VL+IL  +T +A ++REI+
Sbjct: 206 GALKRSVLFLNTADDPAIERIITPRVALTVAEYLAFELGMHVLVILTDMTNYAEALREIS 265

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  +GYP  ++++L  + ER G    +KG++T V  + +  D+   PI D    
Sbjct: 266 AAREEVPGRKGYPGYLYTDLSTIYERAGKLNGKKGSVTQVPILSMPSDDITHPIPDLTGY 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385
           I +G IVL R L  +G YPPV+ L S+SRL      + +  AD  ++ + +     R +E
Sbjct: 326 ITEGQIVLGRDLFRQGVYPPVNILMSLSRLMKDGIGEGSTRADHGEISNQVYDAYSRAQE 385

Query: 386 TRDIRLIGG 394
            R +  I G
Sbjct: 386 VRALAGIVG 394


>gi|326799697|ref|YP_004317516.1| ATP synthase subunit beta [Sphingobacterium sp. 21]
 gi|326550461|gb|ADZ78846.1| ATP synthase subunit beta [Sphingobacterium sp. 21]
          Length = 501

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 163/330 (49%), Gaps = 42/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161
           GRV N +G  IDG   L K +     +  +PP       E +   TGI+VID+  P   G
Sbjct: 89  GRVFNVVGDAIDGIKELDKSN--GRPIHNLPPKFEDLSTETEVLYTGIKVIDLLEPYAKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+       +  +  + + + VGER RE    +RE IE       
Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKAYSGLSVFAGVGERTREGNDLLREMIESGIIKYG 206

Query: 208 -DYL-----GD-NLK----------KSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
            ++L     GD NL+          K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 207 DEFLHSMEKGDWNLEQVDTDALKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGDG 266

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 267 EGAGKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKRG 324

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ +   
Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILNPTI 384

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +   + R++E +DI  I G
Sbjct: 385 LGDEHYNTAQRVKETLQRYKELQDIIAILG 414


>gi|269216175|ref|ZP_06160029.1| ATP synthase F1, beta subunit [Slackia exigua ATCC 700122]
 gi|269130434|gb|EEZ61512.1| ATP synthase F1, beta subunit [Slackia exigua ATCC 700122]
          Length = 485

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+P+D +  + +    M I    P   +     + F+TGI+ ID+  P   G 
Sbjct: 106 GRIWNVMGQPVD-EKPMPEVSGYMPIHRPAPDYESLSTTTEIFETGIKAIDLIEPFIRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
           + G+F G+G+GK+     L++  A+      V    VGER RE  + F+E      ++K+
Sbjct: 165 KTGLFGGAGVGKTVIIQELINNLAQEHSGTSVFTG-VGERTREGTDLFLEMSESGVVEKT 223

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF  +  E++   G +P
Sbjct: 224 CLVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRMP 283

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 284 SAVGYQPTLATEMGDLQERI--TSTTTGSITSVQAVYVPADDLTDPAPATTFTHLDAKTV 341

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+RS+AE G YP VDPL S SR  + A   +E  ++ + +  L+  +++ +DI  I G
Sbjct: 342 LSRSIAELGIYPAVDPLESTSRALEPAIVGEEHYRVATGIQELLQNYKDLQDIIAILG 399


>gi|118917348|dbj|BAF40460.1| ATP synthase beta subunit [Pycnocoma cornuta]
          Length = 489

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       IS+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGISVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62390100|ref|YP_225502.1| F0F1 ATP synthase subunit beta [Corynebacterium glutamicum ATCC
           13032]
 gi|145295351|ref|YP_001138172.1| F0F1 ATP synthase subunit beta [Corynebacterium glutamicum R]
 gi|166201698|sp|A4QDH3|ATPB_CORGB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|560817|emb|CAA54202.1| ATPase beta-subunit [Corynebacterium glutamicum]
 gi|9757621|dbj|BAB08157.1| H+-ATPase beta subunit [Corynebacterium glutamicum]
 gi|10039452|dbj|BAB13360.1| H+-ATPase beta subunit [Brevibacterium flavum]
 gi|41325436|emb|CAF19916.1| ATP SYNTHASE ALPHA SUBUNIT [Corynebacterium glutamicum ATCC 13032]
 gi|140845271|dbj|BAF54270.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 483

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 165/300 (55%), Gaps = 11/300 (3%)

Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160
           G V NALG  +D D SL    ++    + + PP+ ++ +   +  +TGI+VID+ TP   
Sbjct: 103 GHVFNALGDCLD-DVSLNNNPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVK 161

Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ 
Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQD 221

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 222 TALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 281

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD  
Sbjct: 282 MPSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDAT 339

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
             L+RS+A +G YP V+PL S SR+ + A   +    VS  +  ++ + +E +DI  I G
Sbjct: 340 TELDRSIASKGIYPAVNPLTSTSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILG 399


>gi|183206596|gb|ACC54496.1| ATP synthase beta subunit [Prismatocarpus diffusus]
          Length = 488

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 209

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|164566051|gb|ABY61168.1| ATP synthase beta subunit [Danaea alata]
 gi|164566053|gb|ABY61169.1| ATP synthase beta subunit [Danaea alata]
          Length = 394

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|122919647|pdb|2C61|A Chain A, Crystal Structure Of The Non-Catalytic B Subunit Of A-Type
           Atpase From M. Mazei Go1
 gi|122919648|pdb|2C61|B Chain B, Crystal Structure Of The Non-Catalytic B Subunit Of A-Type
           Atpase From M. Mazei Go1
 gi|240104341|pdb|3DSR|A Chain A, Adp In Transition Binding Site In The Subunit B Of The
           Energy Converter A1ao Atp Synthase
 gi|240104342|pdb|3DSR|B Chain B, Adp In Transition Binding Site In The Subunit B Of The
           Energy Converter A1ao Atp Synthase
          Length = 469

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108
           +  G  +   GQV+  + DIV +    G G       ++F     ++  S    GR+++ 
Sbjct: 41  IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 100

Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
            G+P DG      D  L     +M   +++PP        K F +TGI  ID    L  G
Sbjct: 101 SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           Q++ +F+ SG+  + +    AR      S+    V+ + +G    E + F+ D+     L
Sbjct: 153 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 212

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
           +++VV +  +D+  + R + P  A+T AEY +   G +VL+IL  IT +A ++R++    
Sbjct: 213 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 272

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L  L ER G  +  KG++T +  + + GD+   PI D    I +
Sbjct: 273 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 332

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389
           G IV+ R L  +G YPP++ L S+SRL +    A    ++ K VS    +   + E RD+
Sbjct: 333 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 390

Query: 390 R 390
           R
Sbjct: 391 R 391


>gi|314927445|gb|EFS91276.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL044PA1]
 gi|328907530|gb|EGG27296.1| ATP synthase F1, beta subunit [Propionibacterium sp. P08]
          Length = 484

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 9/269 (3%)

Query: 133 PPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFD 188
           PP  +    E +  +TGI+V+D+ TP   G +IG+F G+G+GK+ L+  M  R   +   
Sbjct: 133 PPTFDDLEPETEMLETGIKVLDLLTPYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGG 192

Query: 189 KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  + I +      LK + +V    DE P  R    LT +T+AEYF  
Sbjct: 193 TSVFAGVGERTREGNDLINEMDEAGVLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRD 252

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF+ +  E++T  G +P A GY  ++  E+ +L ERI  +     +
Sbjct: 253 VQNQDVLLFIDNIFRFSQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHS 310

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ +V V  D++ DP   +  + LD    L+R +A  G YP VDPL S SR+ D  + 
Sbjct: 311 ITSMQAVYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLTSTSRILDPLYV 370

Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             E     + +  ++ R +E +DI  I G
Sbjct: 371 GQEHYDTATQVKQILQRNKELQDIIAILG 399


>gi|55056890|emb|CAF21946.1| ATP synthase beta subunit [Araucaria araucana]
          Length = 448

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ +  GQ+I++  ++        V    +   + +  G  VF  G    +   A   GR
Sbjct: 23  KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 82

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  +  +   + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 83  IFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 139

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     +     
Sbjct: 140 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQN 199

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 200 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 259

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 260 ALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 317

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E +DI
Sbjct: 318 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDI 377

Query: 390 RLIGG 394
             I G
Sbjct: 378 IAILG 382


>gi|268609336|ref|ZP_06143063.1| V-type ATP synthase subunit B [Ruminococcus flavefaciens FD-1]
          Length = 458

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 168/329 (51%), Gaps = 16/329 (4%)

Query: 81  ISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           I+L D  +VF   +  +  S    GRV + LG+PID    +   D  M++       + R
Sbjct: 63  INLQDSSVVFSGHQMELGVSEDMLGRVFDGLGRPIDDGPEIIP-DKRMDVNGLPMNPVAR 121

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVII 192
           +  ++  +TG+  ID    L  GQ++ +F+ SG+  +   +  AR       D    V+ 
Sbjct: 122 KYPQEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHAQFAAQIARQAKVRGKDEQFAVVF 181

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGD 250
           + +G    E   F++ +     L ++V+ +  +++S I R   P  A+T AEY +  KG 
Sbjct: 182 AAMGITFEESEFFVKSFRETGALDRTVLFINLANDSAIERLATPKMALTAAEYLAFEKGM 241

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL+IL  IT +A ++RE++    E+P  RGYP  ++++L  + ER G    ++G+IT +
Sbjct: 242 HVLVILTDITNYADALREVSAARKEVPGRRGYPGYMYTDLATIYERAGRQADKEGSITMI 301

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----W 365
             + +  D+   PI D    I +G I+L+R L  +G  PPVD L S+SRL DK       
Sbjct: 302 PILTMPEDDKTHPIPDLTGYITEGQIILSRELYRKGINPPVDVLPSLSRLKDKGIGEGKT 361

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           SAD    ++ L     R ++ +++ ++ G
Sbjct: 362 SADHSDTMNQLFSAYARGKDAKELMVVLG 390


>gi|258616717|ref|ZP_05714487.1| V-type ATP synthase subunit B [Enterococcus faecium DO]
          Length = 413

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 15/317 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           GQV+ +  D  +V I     G  +    + F      +  S    GRV + LG+P D G 
Sbjct: 42  GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           + L +  L  +I  +V   + R   ++  +TGI  ID    L  GQ++ VF+GSG+    
Sbjct: 102 EILPEKHL--DINGEVINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 159

Query: 177 LLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           L +  AR       SD F  V+ + +G    E   F+ED+     + +SV+ +  +++  
Sbjct: 160 LAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPA 218

Query: 229 ILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R   P  A+T AEY +  KG +VL+I+  +T +A ++REI+    E+P  RGYP  ++
Sbjct: 219 IERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLY 278

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + L  L ER G     KG++T +  + +  D+   PI D    I +G I+L R L + G 
Sbjct: 279 TNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGI 338

Query: 348 YPPVDPLASVSRLADKA 364
            PP+D L S+SRL DK 
Sbjct: 339 QPPIDVLPSLSRLKDKG 355


>gi|268315651|ref|YP_003289370.1| ATP synthase F1, beta subunit [Rhodothermus marinus DSM 4252]
 gi|262333185|gb|ACY46982.1| ATP synthase F1, beta subunit [Rhodothermus marinus DSM 4252]
          Length = 501

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 161/325 (49%), Gaps = 36/325 (11%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG     + +    I +  PP        +  +TGI+VID+  P+  G 
Sbjct: 93  GRLFNVVGQAIDGLPQ-PQAEGYRPIHAPAPPFEELATRVEMLETGIKVIDLIQPVMRGG 151

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           ++G+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   GD
Sbjct: 152 KVGLFGGAGVGKTVLIMELINNIAKAHEGLSVFAGVGERTREGNDLLREMLESKVIRYGD 211

Query: 213 -------------------NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250
                               LKKS   +V    +E P  R    LT + IAEYF    G 
Sbjct: 212 AFLESMKAGGWDLSKVDFEELKKSQATLVFGQMNEPPGARARVALTGLAIAEYFRDLGGR 271

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G IT+ 
Sbjct: 272 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERI--TSTKHGAITSF 329

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            ++ V  D+  DP   +  + LD   VL+R LA +G YP VDPL S SR+ D     +E 
Sbjct: 330 QAIYVPADDLTDPAPATTFAHLDATTVLSRQLAAQGIYPAVDPLESTSRILDPNIVGEEH 389

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            ++   +  ++ R++E +DI  I G
Sbjct: 390 YRVAQEVKQILQRYKELQDIIAILG 414


>gi|227501705|ref|ZP_03931754.1| F0F1 ATP synthase subunit beta [Corynebacterium accolens ATCC
           49725]
 gi|306835882|ref|ZP_07468877.1| ATP synthase F1 sector beta subunit [Corynebacterium accolens ATCC
           49726]
 gi|227077730|gb|EEI15693.1| F0F1 ATP synthase subunit beta [Corynebacterium accolens ATCC
           49725]
 gi|304568247|gb|EFM43817.1| ATP synthase F1 sector beta subunit [Corynebacterium accolens ATCC
           49726]
          Length = 481

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D +  LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R++A +G YP V+PL S SR+ +     ++  ++   +  ++ + +E +DI  I G
Sbjct: 339 ELDRAIASKGIYPAVNPLTSTSRILEPGIVGEKHYEVAQRVIGILQKNKELQDIIAILG 397


>gi|2493102|sp|Q48333|VATB_HALVO RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|496905|emb|CAA56052.1| membrane ATPase [Haloferax volcanii]
 gi|1098058|prf||2115218E ATPase:SUBUNIT=beta
          Length = 468

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PIDG   +   D   +I+       +R+  E+  +TG+  ID    L  G
Sbjct: 84  LGRVLDGSGQPIDGGPEIVP-DERRDIVGAAINPYSREYPEEFIQTGVSAIDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYL 210
           Q++ +F+ SG+  + L    AR                 V+   +G    E  EF+ED+ 
Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEDEESGEESEFAVVFGAMGITQEEANEFMEDFE 202

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               L++SVV    +D+  + R + P  A+T AEY +   D +VL+IL  +T +  ++RE
Sbjct: 203 RTGALERSVVFTNLADDPAVERTVTPRLALTTAEYLAFDKDYHVLVILTDMTNYCEALRE 262

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I     E+P  RGYP  ++++L +L ER G  +   G++T +  + + GD+   PI D  
Sbjct: 263 IGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHPIPDLT 322

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             I +G I ++R L  +G  PP++PL S+SRL D
Sbjct: 323 GYITEGQIYIDRDLNSQGIRPPINPLPSLSRLMD 356


>gi|195160213|ref|XP_002020970.1| GL25088 [Drosophila persimilis]
 gi|194118083|gb|EDW40126.1| GL25088 [Drosophila persimilis]
          Length = 661

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 173/345 (50%), Gaps = 26/345 (7%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +IV    +   E I  G  V   G   R++      GR++N +G PID      +G++  
Sbjct: 159 NIVRCVAMDATEGIKRGQKVVDTGYPIRVAVGKAVLGRILNVVGDPIDE-----RGEVKS 213

Query: 127 EIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178
           E  S +    P +    V+     TGI+VID+  P   G +IG+F G+G+GK+ L+    
Sbjct: 214 EYHSFIHTEAPVLTELSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELI 273

Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIEDY---LGDNLKKSVVVVATSDESPILR 231
           +  A++     V +   GER RE      E IE     L ++  K V+V    +E P  R
Sbjct: 274 NNIAKAHGGYSVFVG-AGERTREGNDLYHEMIESKVISLEEDTSKVVLVFGQMNEPPGAR 332

Query: 232 KMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +TIAEYF    G +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 333 SRVVLTGLTIAEYFRDIDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDM 392

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +    G+IT+V +V V  D+ +DP   +  + LD   VL+R +AE G YP 
Sbjct: 393 GTMQERI--TSTRNGSITSVQAVYVPADDLSDPAPAATFTHLDATTVLSRPIAELGIYPA 450

Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VDPL S SR+ D     +E   V+ ++   +  ++  +DI  I G
Sbjct: 451 VDPLDSSSRILDPDVVGEEHYNVARAVQKTLQGYKSLQDIIAILG 495


>gi|155029335|dbj|BAF75551.1| ATP synthase beta subunit [Cocconerion minus]
          Length = 489

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|28628128|gb|AAO34612.1| HrcN [Erwinia chrysanthemi]
          Length = 459

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 2/187 (1%)

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F + G  VLLI+DS+TRFA + REI    GE     G P SV++ LPRL+ER G  +  +
Sbjct: 263 FRAAGKQVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAG--QTRQ 320

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D L S+SR     
Sbjct: 321 GAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAIDVLMSLSRTMSNV 380

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  +  +++  L+  +++   +  +G Y+PG D   D AV     I  FL+Q+  + 
Sbjct: 381 VEREHTRNANAVRRLMAAYKQVEMLIRLGEYQPGHDAFTDAAVSANDDINRFLQQAMREP 440

Query: 425 SSEDVFQ 431
            S D  Q
Sbjct: 441 QSFDFIQ 447


>gi|33598626|ref|NP_886269.1| F0F1 ATP synthase subunit beta [Bordetella parapertussis 12822]
 gi|33603577|ref|NP_891137.1| F0F1 ATP synthase subunit beta [Bordetella bronchiseptica RB50]
 gi|81579009|sp|Q7W3B0|ATPB_BORPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81836821|sp|Q7WEM9|ATPB_BORBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33574755|emb|CAE39414.1| ATP synthase beta chain [Bordetella parapertussis]
 gi|33577702|emb|CAE34967.1| ATP synthase beta chain [Bordetella bronchiseptica RB50]
          Length = 466

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    +   D    I    P         +  +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEAGPIAS-DEKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E  ++   +   + R++E RDI  I G
Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILG 384


>gi|22002079|sp|Q60187|VATB_METMA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
          Length = 460

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108
           +  G  +   GQV+  + DIV +    G G       ++F     ++  S    GR+++ 
Sbjct: 32  IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 91

Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
            G+P DG      D  L     +M   +++PP        K F +TGI  ID    L  G
Sbjct: 92  SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           Q++ +F+ SG+  + +    AR      S+    V+ + +G    E + F+ D+     L
Sbjct: 144 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
           +++VV +  +D+  + R + P  A+T AEY +   G +VL+IL  IT +A ++R++    
Sbjct: 204 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L  L ER G  +  KG++T +  + + GD+   PI D    I +
Sbjct: 264 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 323

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389
           G IV+ R L  +G YPP++ L S+SRL +    A    ++ K VS    +   + E RD+
Sbjct: 324 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 381

Query: 390 R 390
           R
Sbjct: 382 R 382


>gi|271963209|ref|YP_003337405.1| H(+)-transporting two-sector ATPase [Streptosporangium roseum DSM
           43021]
 gi|270506384|gb|ACZ84662.1| H(+)-transporting two-sector ATPase [Streptosporangium roseum DSM
           43021]
          Length = 475

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 140/254 (55%), Gaps = 8/254 (3%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVR 203
           TGI+VID+ TP   G +IG+F G+G+GK+ L+    R          + + VGER RE  
Sbjct: 141 TGIKVIDLLTPYVKGGKIGLFGGAGVGKTVLIQEMIRRVALKFSGTSVFAGVGERTREGN 200

Query: 204 E-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261
           + ++E      LK + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I R
Sbjct: 201 DLWLEMDEAGVLKDTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFR 260

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++T  G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  
Sbjct: 261 FTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDIT 318

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLI 380
           DP   +  + LD   VL+R ++E+G YP VDPL S SR+ D     +E   V+  T  ++
Sbjct: 319 DPAPHNAFAHLDAQTVLSRPISEKGIYPAVDPLDSTSRILDPLILGEEHYRVAQETKRIL 378

Query: 381 HRFEETRDIRLIGG 394
            +++E +DI  I G
Sbjct: 379 QKYKELQDIIAILG 392


>gi|15893158|ref|NP_360872.1| F0F1 ATP synthase subunit beta [Rickettsia conorii str. Malish 7]
 gi|15620369|gb|AAL03773.1| ATP synthase beta chain [Rickettsia conorii str. Malish 7]
          Length = 499

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 19/316 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVI 152
           RI       GR++N +G+PIDG   +   ++S   + K  P    Q  E     TGI+VI
Sbjct: 106 RIPVGTETLGRIMNVVGEPIDGKGDIKSSNISS--IYKPAPDFTHQSTECNILVTGIKVI 163

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + 
Sbjct: 164 DLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 223

Query: 210 LGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259
           +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +D+I
Sbjct: 224 IDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNI 283

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+
Sbjct: 284 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVPADD 341

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  +  
Sbjct: 342 LTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQ 401

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 402 VLQTYKSLQDIITILG 417


>gi|292654497|ref|YP_003534394.1| A-type ATP synthase subunit B [Haloferax volcanii DS2]
 gi|291371653|gb|ADE03880.1| A-type ATP synthase subunit B [Haloferax volcanii DS2]
          Length = 468

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PIDG   +   D   +I+       +R+  E+  +TG+  ID    L  G
Sbjct: 84  LGRVLDGSGQPIDGGPEIVP-DERRDIVGAAINPYSREYPEEFIQTGVSAIDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYL 210
           Q++ +F+ SG+  + L    AR                 V+   +G    E  EF+ED+ 
Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEDEESGEESEFAVVFGAMGITQEEANEFMEDFE 202

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               L++SVV    +D+  + R + P  A+T AEY +   D +VL+IL  +T +  ++RE
Sbjct: 203 RTGALERSVVFTNLADDPAVERTVTPRLALTTAEYLAFDKDYHVLVILTDMTNYCEALRE 262

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I     E+P  RGYP  ++++L +L ER G  +   G++T +  + + GD+   PI D  
Sbjct: 263 IGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHPIPDLT 322

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             I +G I ++R L  +G  PP++PL S+SRL D
Sbjct: 323 GYITEGQIYIDRDLNSQGIRPPINPLPSLSRLMD 356


>gi|212550491|ref|YP_002308808.1| F0F1 ATP synthase subunit beta [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|226739975|sp|B6YQC5|ATPB_AZOPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|212548729|dbj|BAG83397.1| F-type ATP synthase beta subunit [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 500

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 165/337 (48%), Gaps = 57/337 (16%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMN--RQRVEKGFKTGIRVIDIFTP 157
           GR++N +G+ IDG   L     S E    +   PP        VE  F TGI+VID+  P
Sbjct: 91  GRLLNVIGETIDGMKCL-----SYENTKSIHCDPPKFKDLSTSVEVLF-TGIKVIDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE- 207
              G +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE 
Sbjct: 145 YLKGGKIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIES 202

Query: 208 -----------------------DYLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIA 242
                                  DY  + LKKS   +V    +E P  R    L+ +TIA
Sbjct: 203 GVIRYGKEFEEGMRLGEWDLSKIDY--EELKKSQATLVFGQMNEPPGARSSVVLSGLTIA 260

Query: 243 EYF----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           E F     S G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ ++ ERI 
Sbjct: 261 EAFRDQSGSDGHDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKMQERI- 319

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT++ +V V  D+  DP   +  + LD   VL+R + E G YP VDPL SVS
Sbjct: 320 -TSTKNGSITSIQAVYVPADDLTDPAPATTFTFLDATTVLDRKIFELGIYPAVDPLNSVS 378

Query: 359 RLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           R+ D      +       +  L+ R++E +DI  I G
Sbjct: 379 RILDPNVLGQEHYDTAQKVKQLLQRYKELQDIIAILG 415


>gi|42559020|gb|AAS20196.1| ATP synthase beta subunit [Ecdeiocolea monostachya]
          Length = 477

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   SLG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---SLGPVDTSATFPIHRSAPAFIELDTKLAIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 199

Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 200 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 259

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 260 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 317

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +   S+   + R
Sbjct: 318 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQSVKQTLQR 377

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 378 YKELQDIIAILG 389


>gi|170076614|ref|YP_001733253.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7002]
 gi|169887476|gb|ACB01184.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7002]
          Length = 465

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 149/296 (50%), Gaps = 9/296 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N  G+ ID    L        I     P + +    +  +TGI+VID+  P+ 
Sbjct: 91  ALLGRMFNVFGEAIDQGKPL-TAVKHRSIHQAAIPLVQQSTQAEILETGIKVIDVLAPIE 149

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215
            G + G+F G+G+GK+ L++    +       ISL   +GER RE  E   +      L 
Sbjct: 150 RGGKAGLFGGAGVGKTVLITEMIHNMVSQHQGISLFCGIGERNREAEELYREMQATGVLD 209

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSG 274
           ++V++    +E P  R      A+TIAEYF  +   +VLL++D+I RF  + +E++   G
Sbjct: 210 QTVLLFGQMNEPPGARFRVGHAALTIAEYFRDEARQDVLLLIDNIFRFIQAGQEVSGLMG 269

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ELP   GY  ++ +EL  L ERI  +  + G IT+V +V V  D+  DP A      L  
Sbjct: 270 ELPSRVGYQPTLATELAALEERI--TSTKNGAITSVQAVYVPADDFTDPAAVHTFGHLSA 327

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            IVL+R  A EG YP VDPL S S++   A +     ++  ++   +  +EE +D+
Sbjct: 328 SIVLSRKRASEGFYPAVDPLRSSSKMLMPAIAGRRHYEIALAVRQTLATYEELKDM 383


>gi|159042990|ref|YP_001531784.1| F0F1 ATP synthase subunit beta [Dinoroseobacter shibae DFL 12]
 gi|190358209|sp|A8LN39|ATPB1_DINSH RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|157910750|gb|ABV92183.1| ATP synthase F1, beta subunit [Dinoroseobacter shibae DFL 12]
          Length = 462

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 157/295 (53%), Gaps = 13/295 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG--FKTGIRVIDIFTPLCH 160
           GR+++  G P+DG         +   + + PP ++  RV +    +TGI+ ID+ +P+  
Sbjct: 88  GRMLDMFGAPLDGAPP--PEATARRPIHRPPPVLS-DRVLRAEVLETGIKAIDLLSPIER 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKS 217
           G + G+F G+G+GK+ LLS    +       +SL   +GER RE  E   +     +++ 
Sbjct: 145 GGKTGLFGGAGVGKTVLLSELIHNTVEHHHGVSLFCGIGERSREAEELWREMGEAGVRER 204

Query: 218 VVVV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +V++    +E+P +R +   +A+T+AEYF   +  +VLL++D+I RF  +  E++   G 
Sbjct: 205 MVMLFGQMNEAPGVRFLVGHSALTMAEYFRDDREQDVLLLIDNIFRFVQAGSEVSGLLGR 264

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P   GY  ++ +EL  L ERI  +   +G IT++ +V V  D+  DP A  + S L   
Sbjct: 265 MPSRVGYQPTLATELAALQERI--ASTRRGAITSIQAVYVPADDFTDPAAAHIFSHLSAS 322

Query: 336 IVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +VL+R  A EG YP VDPLAS S  L  +        +   +   +  +E+ RDI
Sbjct: 323 VVLSRKRASEGLYPAVDPLASTSVMLTPEVVGQRHYDIARGVRRTLAEYEDLRDI 377


>gi|461568|sp|Q05373|ATPB_SYNP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|480499|pir||S36972 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           Synechococcus sp. (PCC 6716)
 gi|49227|emb|CAA49882.1| ATP synthase (beta) [Synechococcus sp.]
          Length = 482

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + ++ I    P     +     F+TGI+VID+ TP  
Sbjct: 95  ATLGRIFNVLGEPVDEKGEVNISE-TLPIHRPAPSFTELETKPSVFETGIKVIDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      E IE  + D
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVID 213

Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
               +  K  +V    +E P  R    L+ +T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 KDDPSKSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTMEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +        E  +   ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSNMLQPDIVGSEHYQTARAVQATLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|307343720|emb|CBJ19277.1| atpD synthase beta subunit [Micromonospora sp. CR38]
          Length = 298

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|307343686|emb|CBJ19260.1| atpD synthase beta subunit [Micromonospora sp. GUI16]
          Length = 298

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|207744812|ref|YP_002261204.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609]
 gi|206596222|emb|CAQ63149.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609]
          Length = 439

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 18/302 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR+++ LG+PID       G ++ E    I  K P            +TGI+VID+  P 
Sbjct: 94  GRIMDVLGRPIDE-----AGPIACEEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPF 148

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213
             G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N 
Sbjct: 149 AKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNV 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L K  +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   
Sbjct: 208 LDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALL 267

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+ +L ERI  +  + G+IT++ +V V  D+  DP   +    LD
Sbjct: 268 GRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLD 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392
             +VL+R +A  G YP VDPL S SR  D      E  ++   +   + R++E RDI  I
Sbjct: 326 STVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAI 385

Query: 393 GG 394
            G
Sbjct: 386 LG 387


>gi|183206598|gb|ACC54497.1| ATP synthase beta subunit [Merciera tenuifolia]
          Length = 488

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|307343730|emb|CBJ19282.1| atpD synthase beta subunit [Micromonospora sp. SG15]
          Length = 308

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 7   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 66

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 67  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 126

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+ +L ERI     +   IT++ ++ V  D+
Sbjct: 127 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGQLQERITSVRGQA--ITSMQAIYVPADD 184

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E  ++ + +  
Sbjct: 185 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFQVATEVKR 244

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 245 ILQRYKDLQDIIAILG 260


>gi|307343728|emb|CBJ19281.1| atpD synthase beta subunit [Micromonospora sp. SG10]
          Length = 302

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|20467409|gb|AAL27835.1| ATPase beta subunit [Araucaria araucana]
          Length = 452

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ +  GQ+I++  ++        V    +   + +  G  VF  G    +   A   GR
Sbjct: 21  KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 80

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  +  +   + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 81  IFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 137

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     +     
Sbjct: 138 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQN 197

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 198 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 257

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 258 ALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 315

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E +DI
Sbjct: 316 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDI 375

Query: 390 RLIGG 394
             I G
Sbjct: 376 IAILG 380


>gi|4519348|dbj|BAA75589.1| ATP synthase beta-subunit [Vitreochlamys ordinata]
          Length = 376

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D   ++   + ++ I    P   +       F+TGI+V+D+  P   G
Sbjct: 31  LGRIFNVLGEPVDNMGNVLVEE-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E 
Sbjct: 90  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  S+   + R++E
Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|70997705|ref|XP_753589.1| ATP synthase F1, beta subunit [Aspergillus fumigatus Af293]
 gi|66851225|gb|EAL91551.1| ATP synthase F1, beta subunit, putative [Aspergillus fumigatus
           Af293]
 gi|159126680|gb|EDP51796.1| ATP synthase F1, beta subunit, putative [Aspergillus fumigatus
           A1163]
          Length = 519

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P    +    +   TGI+V+D+  P   G
Sbjct: 130 LGRIVNVTGDPIDERGPI-KATKFAPIHAEAPEFTEQSTSAEILVTGIKVVDLLAPYARG 188

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +     +   
Sbjct: 189 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 247

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 248 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 307

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  +
Sbjct: 308 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 365

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E   V++ +  ++  ++  +DI
Sbjct: 366 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYAVATRVQQMLQEYKSLQDI 425

Query: 390 RLIGG 394
             I G
Sbjct: 426 IAILG 430


>gi|257852946|gb|ACV71484.1| ATP synthase beta subunit [Cratoxylum formosum]
          Length = 488

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID D  L     +  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPID-DLGLVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG---- 211
             G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++       
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|257387337|ref|YP_003177110.1| V-type ATP synthase subunit B [Halomicrobium mukohataei DSM 12286]
 gi|257169644|gb|ACV47403.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Halomicrobium mukohataei DSM 12286]
          Length = 471

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G PIDG   + + D   +I+ K     +R+  E+  +TG+  ID    L  G
Sbjct: 85  LGRVLSGSGDPIDGGPEI-EPDERRDIVGKAINPYSREYPEEFIQTGVSGIDGMNTLVRG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGREVREFIED 208
           Q++ +F+ SG+  + L    AR                   VI   +G    E  EF++D
Sbjct: 144 QKLPIFSASGLPHNDLALQIARQASVPEEEEGDDDEGSEFAVIFGAMGITQEEANEFMDD 203

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +     L++SVV +  +D+  + R + P  A+T AEY +  KG +VL+IL  +T +  ++
Sbjct: 204 FERTGALERSVVFMNLADDPAVERTLTPRLALTTAEYLAFDKGYHVLVILTDMTNYCEAL 263

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI     E+P  RGYP  ++++L +L ER G  E  +G++T +  + + GD+   PI D
Sbjct: 264 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPD 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
               I +G I ++R L  +G  PP++ L S+SRL D
Sbjct: 324 LTGYITEGQIYIDRDLNSQGIEPPINVLPSLSRLMD 359


>gi|120437867|ref|YP_863553.1| F0F1 ATP synthase subunit beta [Gramella forsetii KT0803]
 gi|166201708|sp|A0M791|ATPB_GRAFK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117580017|emb|CAL68486.1| ATP synthase subunit beta [Gramella forsetii KT0803]
          Length = 503

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G+  + I  + P   +     +   TGI+VID+  P   G
Sbjct: 91  GRLFNVIGDAIDGLGNLPKAGEDGLPIHRQAPKFEDLSVSTEVLFTGIKVIDLIEPYSKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 211 DDFMHSMEEGGWDLQKVDKEVMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 270

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G
Sbjct: 271 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKNG 328

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 388

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  L+ R++E +DI  I G
Sbjct: 389 LGDEHYDCAQRVKELLQRYKELQDIIAILG 418


>gi|114421|sp|P17614|ATPBM_NICPL RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|19685|emb|CAA26620.1| ATP synthase beta subunit [Nicotiana plumbaginifolia]
          Length = 560

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+ ID    +   D  + I  + P  + +   ++   TGI+V+D+  P  
Sbjct: 168 ATLGRIINVIGEAIDERGPITT-DHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 226

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     RE IE    
Sbjct: 227 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 285

Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LG+   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 286 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 345

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 346 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 403

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++  ++
Sbjct: 404 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYK 463

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 464 NLQDIIAILG 473


>gi|183206652|gb|ACC54524.1| ATP synthase beta subunit [Campanula persicifolia]
          Length = 471

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTWPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|113910950|gb|ABI48207.1| ATPase beta subunit [Phyllocladus aspleniifolius]
          Length = 456

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 66  GATLGRIFNVLGEPVD---DLGPVDASARSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 122

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 123 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 182

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 183 VIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|291298840|ref|YP_003510118.1| ATP synthase F1 subunit beta [Stackebrandtia nassauensis DSM 44728]
 gi|290568060|gb|ADD41025.1| ATP synthase F1, beta subunit [Stackebrandtia nassauensis DSM
           44728]
          Length = 477

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 146/273 (53%), Gaps = 8/273 (2%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184
           I  K PP    +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  M  R   
Sbjct: 121 IHRKPPPFAALEPKTEMLETGIKVLDLLAPYVKGGKIGLFGGAGVGKTVLIQEMVIRVAQ 180

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  + I +      L+++ +V    DE P  R    L+A+T+AE
Sbjct: 181 NFGGSSVFAGVGERTREGNDMIAEMKESGVLEQTALVYGQMDEPPGTRLRVALSALTMAE 240

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   K   VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +  
Sbjct: 241 YFRDVKNQEVLLFVDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERI--TSL 298

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
               IT++ ++ V  D++ DP   +  + LD    L R ++++G YP VDPLAS SR+ +
Sbjct: 299 RGKAITSMQAIYVPADDYTDPAPHTAFTHLDATTNLERKVSDKGIYPAVDPLASSSRILE 358

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                DE  ++ + +  ++ ++ E +DI  I G
Sbjct: 359 PEVVGDEHYRVAAEVKRILQKYNELQDIIAILG 391


>gi|260429053|ref|ZP_05783030.1| ATP synthase F1, beta subunit [Citreicella sp. SE45]
 gi|260419676|gb|EEX12929.1| ATP synthase F1, beta subunit [Citreicella sp. SE45]
          Length = 474

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + + D    I    P    +    +   TGI+VID+  P  
Sbjct: 84  ATLGRILNVVGEPVDEQGPV-EADEYRAIHQPAPEFDEQATDTEILVTGIKVIDLLAPYS 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE  +
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
              DNL +S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 IKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VLNR+++E G YP VDPL S SR+ D     +E   V+  +  ++ R++
Sbjct: 319 ATTFAHLDATTVLNRAISELGIYPAVDPLDSNSRILDPQIVGEEHYNVARDVQGILQRYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|198443079|pdb|2RKW|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding
           Pocket Inside The Subunit B Mutant R416w Of The Energy
           Converter A1ao Atp Synthase
 gi|198443080|pdb|2RKW|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding
           Pocket Inside The Subunit B Mutant R416w Of The Energy
           Converter A1ao Atp Synthase
 gi|198443186|pdb|3B2Q|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding
           Pocket Inside The Subunit B Mutant R416w Of The Energy
           Converter A1ao Atp Synthase
 gi|198443187|pdb|3B2Q|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding
           Pocket Inside The Subunit B Mutant R416w Of The Energy
           Converter A1ao Atp Synthase
 gi|223365864|pdb|3EIU|A Chain A, A Second Transient Position Of Atp On Its Trail To The
           Nucleotide-Binding Site Of Subunit B Of The Motor
           Protein A1ao Atp Synthase
 gi|223365865|pdb|3EIU|B Chain B, A Second Transient Position Of Atp On Its Trail To The
           Nucleotide-Binding Site Of Subunit B Of The Motor
           Protein A1ao Atp Synthase
          Length = 469

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108
           +  G  +   GQV+  + DIV +    G G       ++F     ++  S    GR+++ 
Sbjct: 41  IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 100

Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
            G+P DG      D  L     +M   +++PP        K F +TGI  ID    L  G
Sbjct: 101 SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           Q++ +F+ SG+  + +    AR      S+    V+ + +G    E + F+ D+     L
Sbjct: 153 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 212

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
           +++VV +  +D+  + R + P  A+T AEY +   G +VL+IL  IT +A ++R++    
Sbjct: 213 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 272

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L  L ER G  +  KG++T +  + + GD+   PI D    I +
Sbjct: 273 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 332

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389
           G IV+ R L  +G YPP++ L S+SRL +    A    ++ K VS    +   + E RD+
Sbjct: 333 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 390

Query: 390 R 390
           R
Sbjct: 391 R 391


>gi|113910800|gb|ABI48132.1| ATPase beta subunit [Plagiochila porelloides]
          Length = 456

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 182

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 183 VIDEQNISZSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALPGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 359

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 360 YKELQDIIAISG 371


>gi|307343702|emb|CBJ19268.1| atpD synthase beta subunit [Micromonospora sp. GUI41]
 gi|307343750|emb|CBJ19292.1| atpD synthase beta subunit [Micromonospora sp. SR2]
          Length = 302

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|297559316|ref|YP_003678290.1| ATP synthase F1 subunit beta [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843764|gb|ADH65784.1| ATP synthase F1, beta subunit [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 480

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V N LG+ +D   +         I  K P     +   +   TGI+VID+ TP   G 
Sbjct: 102 GHVFNTLGESLDVPTAELGVTERWPIHRKAPAFDQLESKTEMMVTGIKVIDLLTPYVRGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R +  F  V + + VGER RE  + F+E    + L+ + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIARNFGGVSVFAGVGERTREGTDLFLEMDEMEVLQDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+ +L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 282 SAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRD 388
           L+R ++++G YP VDPL S SR+ D  +  +E   V+  +  ++ R  + +D
Sbjct: 340 LSRPISQKGIYPAVDPLTSTSRILDPQYVGEEHYQVAQRVKEILQRNNDLQD 391


>gi|260655794|ref|ZP_05861263.1| V-type sodium ATPase, B subunit [Jonquetella anthropi E3_33 E1]
 gi|260629410|gb|EEX47604.1| V-type sodium ATPase, B subunit [Jonquetella anthropi E3_33 E1]
          Length = 471

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 166/330 (50%), Gaps = 29/330 (8%)

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNR 138
           +V   GR    P SA   GR+ N  G+P+DG      + S+    L M   S+  P+   
Sbjct: 71  VVRFLGRVLTLPVSADMLGRIFNGRGQPLDGGAPIIPEKSIDVNGLPMNPYSRDYPS--- 127

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVII 192
               +  +TGI  ID   P+  GQ++ +F+ SG+  + + +  AR      +     V+ 
Sbjct: 128 ----EFIQTGISTIDGMNPMVRGQKLPIFSASGLPHNRMAAQLARQANVLGAKGNFAVVF 183

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGD 250
           + +G    E   F+ED+     L+++V+ V  +D+  I R   P  A+T AEY +  K  
Sbjct: 184 AAMGITFEESSFFMEDFRKTGALERTVMFVNLADDPAIERITTPRLALTAAEYLAFEKNM 243

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL+IL  +T +  ++REI+    E+P  RGYP  ++++L  L ER G      G+IT V
Sbjct: 244 HVLVILTDLTNYCEALREISAARKEVPGRRGYPGYLYTDLANLYERAGKLRGSTGSITQV 303

Query: 311 -ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-- 367
            I  + +GD  + PI D    I +G I+L+++L   G YPPVD + S+SRL DK      
Sbjct: 304 PILTMPEGDKTH-PIPDLTGYITEGQIILSQTLHRRGIYPPVDVMPSLSRLKDKGIGKGK 362

Query: 368 ---DEKKLVSSLTHLIHRFEETRDIRLIGG 394
              D   L++ L     R +E +++ +I G
Sbjct: 363 TREDHADLMNQLFAAYARGKEAKELAVILG 392


>gi|255022659|ref|ZP_05294645.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J1-208]
          Length = 456

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   L  G  V + G    +       G
Sbjct: 33  EYETHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG     +  +   I  + P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215
            G+F G+G+GKS L+       SM   +  F  V     GER RE +  + E      L 
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 202

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
           ++ VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G
Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ++P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD 
Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
            IVL RS+A  G +P V+PL S SR  +  +  +   +L   +  ++ R+ E ++I  + 
Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433
           G     D    K V++   I +FL Q    S     +E +F EI
Sbjct: 381 GMAELSDED-KKLVYRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423


>gi|157689164|gb|ABV65138.1| ATP synthase CF1 beta subunit [Plumbago auriculata]
          Length = 498

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    PP +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAPPFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|33318669|gb|AAQ05218.1| ATP synthase beta subunit [Podocarpus chinensis]
          Length = 479

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D S       P PA  +   +   F+TGI+V+D+  
Sbjct: 89  GTTLGRIFNVLGEPVD---DLGPVDASTRSPIHRPAPAFTQLDTKFSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 205

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 206 VIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|183206646|gb|ACC54521.1| ATP synthase beta subunit [Campanula peregrina]
          Length = 473

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 202 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|119367996|dbj|BAF40481.1| ATP synthase beta subunit [Cratoxylum cochinchinense]
          Length = 489

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID D  L     +  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPID-DLGLVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG---- 211
             G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++       
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|61968281|gb|AAX57067.1| ATP synthase beta subunit [Petalodiscus fadenii]
          Length = 479

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGIGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|183206670|gb|ACC54533.1| ATP synthase beta subunit [Heterochaenia ensifolia]
          Length = 483

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPID---NLGPVDTPTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 214

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 215 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 274

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 275 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 332

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 333 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 392

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 393 YKELQDIITILG 404


>gi|7708550|emb|CAB89972.1| ATP synthase beta subunit [Plumbago zeylanica]
          Length = 491

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    PP +        F+TGI+V+D+  P 
Sbjct: 97  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAPPFIQLDTKLSIFETGIKVVDLLAPY 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 156 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 215

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 216 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 275

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 276 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAPA 333

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E
Sbjct: 334 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRYKE 393

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 394 LQDIIAILG 402


>gi|332796856|ref|YP_004458356.1| ATP synthase subunit B [Acidianus hospitalis W1]
 gi|332694591|gb|AEE94058.1| ATP synthase, B subunit [Acidianus hospitalis W1]
          Length = 466

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV N LG+P+D    +  G+      S + PA+ R   E+  +TGI  ID    L  
Sbjct: 90  MLGRVFNPLGEPLDNGPPVISGEKRDINGSAINPAV-RDYPEEFIQTGISAIDGLNSLLR 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIEDYLG 211
           GQ++ +F+GSG+  + L +  A+            V+ + +G R  +    R+F E+   
Sbjct: 149 GQKLPIFSGSGLPANILAAQIAKQATVRGEESNFAVVFAAIGIRYDDALFFRKFFEETGA 208

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
            N  +  + +  ++E P+++ + P TA+T+AEY + + D +VL IL  +T +  S+REI+
Sbjct: 209 IN--RVAMFMTLANEPPVVKILTPRTALTLAEYLAFEKDMHVLAILIDMTNYCESLREIS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P   GYP  ++++L  + ER G  + +KG+IT +  + +  D+   PI D    
Sbjct: 267 AAKEEVPGRGGYPGYMYTDLATIYERAGRVKGKKGSITQMPILTMPNDDMTHPIPDLTGY 326

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385
           I +G IVL+RSL  +G YPP++ L S+SRL      +     D K L + L     +  +
Sbjct: 327 ITEGQIVLDRSLYNKGIYPPINVLMSLSRLMKDGIGEGKTREDHKDLANQLFAAYAKAVD 386

Query: 386 TRDIRLIGG 394
           TR +  I G
Sbjct: 387 TRGLAAIIG 395


>gi|21684883|emb|CAD11568.1| ATP synthase beta subunit [Ecdeiocolea monostachya]
          Length = 484

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   SLG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---SLGPVDTSATFPIHRSAPAFIELDTKLAIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213

Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 214 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +   S+   + R
Sbjct: 332 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQSVKQTLQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|183206642|gb|ACC54519.1| ATP synthase beta subunit [Campanula lactiflora]
          Length = 466

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 199 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|146298581|ref|YP_001193172.1| F0F1 ATP synthase subunit beta [Flavobacterium johnsoniae UW101]
 gi|189081333|sp|A5FLS1|ATPB_FLAJ1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146152999|gb|ABQ03853.1| ATP synthase F1, beta subunit [Flavobacterium johnsoniae UW101]
          Length = 503

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 159/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG  +L K G+  + I  + P   +     +   TGI+VID+  P   G
Sbjct: 91  GRLFNVVGDAIDGLGNLPKTGENGLPIHRQAPKFEDLSTSSEVLFTGIKVIDLIEPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210

Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
                            D  G    K+  V    +E P  R    L+ ++IAEYF     
Sbjct: 211 DDFMHSMENGGWDLSKVDMPGMRESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGAG 270

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
           S +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   KG
Sbjct: 271 SDQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTNKG 328

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+     
Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPHI 388

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             DE       +  ++ ++++ +DI  I G
Sbjct: 389 LGDEHYNCAQRVKEILQKYKQLQDIIAILG 418


>gi|22651732|gb|AAM26938.1| ATP synthase beta subunit [Dionaea muscipula]
          Length = 483

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           +   GR+ N LG+PID   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 95  SATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI------- 206
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +         
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 211

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E  +G++  K  +V    +E P  R    LTA+T+AE+F      +VLL +D+I RF
Sbjct: 212 VINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 327

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + 
Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDKHYETAQRVKQTLQ 387

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 388 RYKEVQDIIAILG 400


>gi|183206634|gb|ACC54515.1| ATP synthase beta subunit [Nesocodon mauritianus]
          Length = 467

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|139522706|gb|ABO77767.1| ATP synthase beta subunit [Burmeistera crassifolia]
          Length = 498

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|34536481|dbj|BAC87674.1| beta subunit of ATP synthase [Hafniomonas laevis]
          Length = 376

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + S+ I    P  ++       F+TGI+V+D+  P  
Sbjct: 29  ATLGRIFNVLGEPVDNMGPV-SAENSLPIHRTSPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF  +   +VLL +D++ R   +  
Sbjct: 148 EKNLAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDQNKQDVLLFIDNVFRLVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  + ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGAVQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
           V + LD   VL+R+LA +G YP VDPL S S +  + W   +K      S+   + R++E
Sbjct: 266 VFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYDCAQSVKRTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|323493009|ref|ZP_08098145.1| F0F1 ATP synthase subunit beta [Vibrio brasiliensis LMG 20546]
 gi|323312745|gb|EGA65873.1| F0F1 ATP synthase subunit beta [Vibrio brasiliensis LMG 20546]
          Length = 467

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  + +  I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLKK 216
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    N++K
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEK 204

Query: 217 S-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
                  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E       +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDTARGVQQTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|225022778|ref|ZP_03711970.1| hypothetical protein CORMATOL_02823 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305681777|ref|ZP_07404581.1| ATP synthase F1, beta subunit [Corynebacterium matruchotii ATCC
           14266]
 gi|224944461|gb|EEG25670.1| hypothetical protein CORMATOL_02823 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305658250|gb|EFM47753.1| ATP synthase F1, beta subunit [Corynebacterium matruchotii ATCC
           14266]
          Length = 481

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +  LG+      I    PP    +   +  +TGI+VID+ TP   G 
Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ + 
Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 222 LVFGQMDEPPGVRMRIALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  +  +IT++ +V V  D++ DP   +  + LD    
Sbjct: 282 SAVGYQPTLADEMGVLQERITSTRGK--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R +A +G YP V+PL S SR+ +     +   ++   + +++ + +E +DI  I G
Sbjct: 340 LDRGIASKGIYPAVNPLTSTSRILEPGIVGERHYEVAQRVINILQKNKELQDIIAILG 397


>gi|183206518|gb|ACC54457.1| ATP synthase beta subunit [Physoplexis comosa]
          Length = 472

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + J  G  V   G    +       GR
Sbjct: 29  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGJMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 89  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 205 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 265 SAVLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R++E +D
Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IITILG 388


>gi|156530135|gb|ABU75164.1| AtpB [Hannoa klaineana]
 gi|156530147|gb|ABU75170.1| AtpB [Odyendyea gabonensis]
          Length = 498

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|2605819|gb|AAC38049.1| ATP synthase beta subunit [Methanosarcina barkeri]
          Length = 469

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 139/263 (52%), Gaps = 8/263 (3%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           PP M R    + F+TGI+ ID+  PL  G + G+F G+G+GK+ LL+    +       +
Sbjct: 120 PPLMRRSTTSEIFETGIKAIDVLVPLERGGKAGLFGGAGVGKTVLLTEMIHNVVKQHQGV 179

Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SS 247
           S+   +GER RE  E   D      L  +V+V    +E P  R     TA+T+AEYF   
Sbjct: 180 SIFCGIGERCREGEELYRDMKDAGVLPNTVMVFGQMNEPPGARFRVGHTALTMAEYFRDD 239

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +  +VLL++D+I RF  +  E++   G++P   GY  ++ +EL  L ERI  S  + G I
Sbjct: 240 ERRDVLLLIDNIFRFIQAGSEVSGLMGQMPSRLGYQPTLGTELSELEERI--STTDAGAI 297

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
            ++ +V V  D+  DP A    S L   IVL+R  A EG YP +DPL S S++A      
Sbjct: 298 MSIQAVYVPADDFTDPSAVHTFSHLSASIVLSRKRASEGLYPAIDPLQSNSKMATPGIVG 357

Query: 368 DEKKLVSS-LTHLIHRFEETRDI 389
           +   L++  +   + ++ E +DI
Sbjct: 358 ERHYLLAQEIRQTLAQYSELKDI 380


>gi|307343618|emb|CBJ19226.1| atpD synthase beta subunit [Micromonospora coerulea]
          Length = 301

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|311113395|ref|YP_003984617.1| ATP synthase F1 sector subunit beta [Rothia dentocariosa ATCC
           17931]
 gi|310944889|gb|ADP41183.1| ATP synthase F1 sector beta subunit [Rothia dentocariosa ATCC
           17931]
          Length = 480

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 7/272 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG  +D  +S    D    I    P     +   +  +TGI+ ID+ TP   G 
Sbjct: 97  GHLFNVLGNALDVPNSDIDADAYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 156

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 157 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 216

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++T  G +P
Sbjct: 217 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 276

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 277 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 334

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           L+R +A  G YP +DPL S SR+ D  +   E
Sbjct: 335 LSREIASRGLYPAIDPLTSTSRILDPQYIGQE 366


>gi|237749342|ref|ZP_04579822.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
 gi|229380704|gb|EEO30795.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
          Length = 458

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 168/333 (50%), Gaps = 11/333 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  + +  G ++ + G   + P+     GR++N LG PID    +   D +  
Sbjct: 49  VVRTIALGSSDGLRRGMVIQNTGNPIMVPTGEATLGRIMNVLGDPIDEQGPIATEDRA-S 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183
           I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+     L++  A+
Sbjct: 108 IHRKAPAYDELSPSQEILETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 167

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
                 V    VGER RE  +F  +    N L K  +V    +E P  R    LT +TIA
Sbjct: 168 QHSGLSVFAG-VGERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTIA 226

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  
Sbjct: 227 ESFRDQGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TST 284

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 285 TTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLD 344

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                +E  +    +  ++ R++E RDI  I G
Sbjct: 345 PLVVGEEHYQTARQVQGILQRYKELRDIIAILG 377


>gi|307128522|ref|YP_003880552.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri CARI]
 gi|306482984|gb|ADM89854.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri CARI]
          Length = 495

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 180/373 (48%), Gaps = 49/373 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GRV N +G  IDG   LG  + S +I + K PP             TGI+VID+  P   
Sbjct: 92  GRVFNVVGNTIDG---LGDLNNSKKISIHKNPPKFEELSTNINILYTGIKVIDLVEPYIK 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL--- 214
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  + + + +   +   
Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 208

Query: 215 -------------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF--SS 247
                                     K+  V    +E P  R    L+ +T+AEY+  S 
Sbjct: 209 GSSFLEEMKNGKWDLSKVDKKELKKSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDSG 268

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG +VL  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + G+I
Sbjct: 269 KGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGSI 326

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V +  D+ +DP   +  S LD   VL+R ++  G YP VDPL+S SR+  K +  
Sbjct: 327 TSIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSKEFIG 386

Query: 368 DEKKLVSS-LTHLIHRFEETRDIRLIGGYR--PGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           ++  L +  +  ++ R++E +DI  I G       D I+   VH+   +  FL Q P  +
Sbjct: 387 NDHYLCAQRVKQILQRYQELQDIIAILGIEELSEEDKII---VHRARRVQRFLSQ-PFHV 442

Query: 425 SSEDVFQEITKKL 437
           + +  F  IT KL
Sbjct: 443 AEQ--FTGITGKL 453


>gi|300741315|ref|ZP_07071336.1| ATP synthase F1, beta subunit [Rothia dentocariosa M567]
 gi|300380500|gb|EFJ77062.1| ATP synthase F1, beta subunit [Rothia dentocariosa M567]
          Length = 483

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 7/272 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G + N LG  +D  +S    D    I    P     +   +  +TGI+ ID+ TP   G 
Sbjct: 100 GHLFNVLGNALDVPNSDIDADAYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 159

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      LK + 
Sbjct: 160 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 219

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++T  G +P
Sbjct: 220 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 279

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD    
Sbjct: 280 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 337

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           L+R +A  G YP +DPL S SR+ D  +   E
Sbjct: 338 LSREIASRGLYPAIDPLTSTSRILDPQYIGQE 369


>gi|156530209|gb|ABU75201.1| AtpB [Simarouba glauca]
          Length = 475

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|156530137|gb|ABU75165.1| AtpB [Hannoa undulata]
          Length = 470

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|21226881|ref|NP_632803.1| V-type ATP synthase subunit B [Methanosarcina mazei Go1]
 gi|20905186|gb|AAM30475.1| A1AO H+ ATPase subunit B [Methanosarcina mazei Go1]
          Length = 478

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108
           +  G  +   GQV+  + DIV +    G G       ++F     ++  S    GR+++ 
Sbjct: 50  IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 109

Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
            G+P DG      D  L     +M   +++PP        K F +TGI  ID    L  G
Sbjct: 110 SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 161

Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           Q++ +F+ SG+  + +    AR      S+    V+ + +G    E + F+ D+     L
Sbjct: 162 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 221

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
           +++VV +  +D+  + R + P  A+T AEY +   G +VL+IL  IT +A ++R++    
Sbjct: 222 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 281

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L  L ER G  +  KG++T +  + + GD+   PI D    I +
Sbjct: 282 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 341

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389
           G IV+ R L  +G YPP++ L S+SRL +    A    ++ K VS    +   + E RD+
Sbjct: 342 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 399

Query: 390 R 390
           R
Sbjct: 400 R 400


>gi|257886751|ref|ZP_05666404.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,141,733]
 gi|315641955|ref|ZP_07896893.1| V-type ATP synthase, subunit B [Enterococcus italicus DSM 15952]
 gi|257822805|gb|EEV49737.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,141,733]
 gi|315482377|gb|EFU72920.1| V-type ATP synthase, subunit B [Enterococcus italicus DSM 15952]
          Length = 458

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 19/319 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           GQV+ +  D  +V I     G  +    + F      +  S    GRV + LG+P D G 
Sbjct: 42  GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101

Query: 117 DSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           + L +   D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+GSG+  
Sbjct: 102 EILPEKYLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
             L +  AR       SD F  V+ + +G    E   F+ED+     + +SV+ +  +++
Sbjct: 158 KELAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLAND 216

Query: 227 SPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
             I R   P  A+T AEY +  KG +VL+I+  +T +A ++REI+    E+P  RGYP  
Sbjct: 217 PAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGY 276

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           +++ L  L ER G     KG++T +  + +  D+   PI D    I +G I+L R L + 
Sbjct: 277 LYTNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKS 336

Query: 346 GRYPPVDPLASVSRLADKA 364
           G  PP+D L S+SRL DK 
Sbjct: 337 GIQPPIDVLPSLSRLKDKG 355


>gi|255324527|ref|ZP_05365644.1| ATP synthase F1, beta subunit [Corynebacterium tuberculostearicum
           SK141]
 gi|311740603|ref|ZP_07714430.1| ATP synthase F1 sector beta subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|255298433|gb|EET77733.1| ATP synthase F1, beta subunit [Corynebacterium tuberculostearicum
           SK141]
 gi|311304123|gb|EFQ80199.1| ATP synthase F1 sector beta subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 481

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D +  LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R++A +G YP V+PL S SR+ +     ++  ++   +  ++ + +E +DI  I G
Sbjct: 339 ELDRAIASKGIYPAVNPLTSTSRILEPGIVGEKHYEVAQRVIGILQKNKELQDIIAILG 397


>gi|197103703|ref|YP_002129080.1| ATP synthase F1, beta subunit atpD [Phenylobacterium zucineum HLK1]
 gi|196477123|gb|ACG76651.1| ATP synthase F1, beta subunit atpD [Phenylobacterium zucineum HLK1]
          Length = 511

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 23/314 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    +   + +  I  + P    +    +   TGI+VID+  P  
Sbjct: 117 ATLGRIMNVIGEPIDEAGPIKTTEYA-PIHREAPSFAEQSTSAEVLVTGIKVIDLMCPYT 175

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215
            G +IG+F G+G+GK+     L++  A++     V+   VGER RE  +   + +  N+ 
Sbjct: 176 KGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHEMIESNVN 234

Query: 216 -------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261
                        K  +V    +E P  R    LT +T AEYF   +G +VLL +D+I R
Sbjct: 235 VDPKKNNGSTEGSKCALVYGQMNEPPGARARVALTGLTQAEYFRDVEGKDVLLFVDNIFR 294

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++ V  D+  
Sbjct: 295 FTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIYVPADDLT 352

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LI 380
           DP   +  + LD   VL+R +A +  +P VDPL S SR+ D     +E   V+  T  ++
Sbjct: 353 DPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLVIGEEHYQVARRTQEIL 412

Query: 381 HRFEETRDIRLIGG 394
            +++  +DI  I G
Sbjct: 413 QQYKALKDIIAILG 426


>gi|257897933|ref|ZP_05677586.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com15]
 gi|257835845|gb|EEV60919.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com15]
          Length = 458

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 19/319 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           GQV+ +  D  +V I     G  +    + F      +  S    GRV + LG+P D G 
Sbjct: 42  GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101

Query: 117 DSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           + L +   D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+GSG+  
Sbjct: 102 EILPEKYLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
             L +  AR       SD F  V+ + +G    E   F+ED+     + +SV+ +  +++
Sbjct: 158 KELAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLAND 216

Query: 227 SPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
             I R   P  A+T AEY +  KG +VL+I+  +T +A ++REI+    E+P  RGYP  
Sbjct: 217 PAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGY 276

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           +++ L  L ER G     KG++T +  + +  D+   PI D    I +G I+L R L + 
Sbjct: 277 LYTNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKS 336

Query: 346 GRYPPVDPLASVSRLADKA 364
           G  PP+D L S+SRL DK 
Sbjct: 337 GIQPPIDVLPSLSRLKDKG 355


>gi|323483470|ref|ZP_08088857.1| hypothetical protein HMPREF9474_00606 [Clostridium symbiosum
           WAL-14163]
 gi|323691023|ref|ZP_08105309.1| V-type sodium ATPase [Clostridium symbiosum WAL-14673]
 gi|323403168|gb|EGA95479.1| hypothetical protein HMPREF9474_00606 [Clostridium symbiosum
           WAL-14163]
 gi|323504962|gb|EGB20738.1| V-type sodium ATPase [Clostridium symbiosum WAL-14673]
          Length = 456

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 26/316 (8%)

Query: 98  SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           S    GRV + LG+PIDG      D+      L M   ++  P       E+  +TGI  
Sbjct: 82  SEDMLGRVFDGLGRPIDGGPEILPDERRDINGLPMNPAARSYP-------EEFIQTGISA 134

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205
           ID    L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F
Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHANLAAQIARQARVRGTDENFAVVFAAMGITFEESNFF 194

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
           IE +     + ++V+ V  +++  + R   P  A+T AEY + + D +VL+IL  IT +A
Sbjct: 195 IESFKETGAIDRTVLFVNLANDPAVERIATPRMALTAAEYLAFEKDMHVLVILTDITNYA 254

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++RE++    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   P
Sbjct: 255 DALREVSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKSGSITMIPILTMPEDDKTHP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTH 378
           I D    I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L  
Sbjct: 315 IPDLTGYITEGQIILSRELYRKGITPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFA 374

Query: 379 LIHRFEETRDIRLIGG 394
              R +E +++ +I G
Sbjct: 375 AYARGKEAKELMVILG 390


>gi|227552087|ref|ZP_03982136.1| proton (H+) or sodium (Na+) translocating V-type ATPase (V-ATPase),
           subunit B [Enterococcus faecium TX1330]
 gi|257895317|ref|ZP_05674970.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com12]
 gi|293378188|ref|ZP_06624357.1| ATP synthase ab C-terminal domain protein [Enterococcus faecium
           PC4.1]
 gi|227178840|gb|EEI59812.1| proton (H+) or sodium (Na+) translocating V-type ATPase (V-ATPase),
           subunit B [Enterococcus faecium TX1330]
 gi|257831882|gb|EEV58303.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com12]
 gi|292643052|gb|EFF61193.1| ATP synthase ab C-terminal domain protein [Enterococcus faecium
           PC4.1]
          Length = 458

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 19/319 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           GQV+ +  D  +V I     G  +    + F      +  S    GRV + LG+P D G 
Sbjct: 42  GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101

Query: 117 DSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           + L +   D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+GSG+  
Sbjct: 102 EILPEKYLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
             L +  AR       SD F  V+ + +G    E   F+ED+     + +SV+ +  +++
Sbjct: 158 KELAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLAND 216

Query: 227 SPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
             I R   P  A+T AEY +  KG +VL+I+  +T +A ++REI+    E+P  RGYP  
Sbjct: 217 PAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGY 276

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           +++ L  L ER G     KG++T +  + +  D+   PI D    I +G I+L R L + 
Sbjct: 277 LYTNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKS 336

Query: 346 GRYPPVDPLASVSRLADKA 364
           G  PP+D L S+SRL DK 
Sbjct: 337 GIQPPIDVLPSLSRLKDKG 355


>gi|66276263|gb|AAY44146.1| ATP synthase beta subunit [Combretocarpus rotundatus]
          Length = 479

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GTTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 203 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  K    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTMLQPQIVGDEHYKTAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|294496093|ref|YP_003542586.1| ATP synthase subunit beta [Methanohalophilus mahii DSM 5219]
 gi|292667092|gb|ADE36941.1| ATP synthase, B subunit [Methanohalophilus mahii DSM 5219]
          Length = 460

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 34/353 (9%)

Query: 60  GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+  + D+V I       G+ +E     +VF     ++  +    GR+++  G+P+DG
Sbjct: 42  GQVLDTSADMVVIQVFEGTQGLNDE---SGVVFSGETIKLPVAKDLLGRILSGSGEPLDG 98

Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
                 +  +     SM   S+ PP       ++  +TGI  ID    L  GQ++ +F+G
Sbjct: 99  GPRIIPEKRVDVNGASMNPFSRRPP-------DEFIQTGISTIDGTNTLVRGQKLPIFSG 151

Query: 170 SGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           SG+  + +    AR      S+    V+ + +G    E + F+ED+     L+++ V + 
Sbjct: 152 SGLPHNEIALQIARQAKVPGSEEDFAVVFAAMGITNEEAQSFMEDFEKTGALERATVFLN 211

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +D+  + R + P  A+T AEY + + D +VL+IL  IT +  ++R++     E+P  RG
Sbjct: 212 LADDPAVERIITPRMALTAAEYLAYEHDMHVLVILTDITNYCEALRQMGAAREEVPGRRG 271

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  L ER G  +  KG++T    + + GD+   PI D    I +G IV++R 
Sbjct: 272 YPGYMYTDLASLYERAGVIKGNKGSVTQFSILTMPGDDITHPIPDLSGYITEGQIVVSRE 331

Query: 342 LAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           L  +G YPP++ L S+SRL +    +  + ++ K VS    L   + E RD+R
Sbjct: 332 LHRKGIYPPINVLPSLSRLMNSGIGEGKTREDHKAVSD--QLYAGYAEGRDLR 382


>gi|225554645|gb|EEH02941.1| ATP synthase subunit beta [Ajellomyces capsulatus G186AR]
 gi|240276989|gb|EER40499.1| mitochondrial ATP synthase [Ajellomyces capsulatus H143]
 gi|325094927|gb|EGC48237.1| mitochondrial ATP synthase [Ajellomyces capsulatus H88]
          Length = 522

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 134 LGRIMNVTGDPIDERGPI-KHTKKAPIHAEAPEYVEQATSAEVLVTGIKVVDLLAPYARG 192

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 193 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 251

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 252 DGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 311

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 312 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 369

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E   V++ +  ++  ++  +DI
Sbjct: 370 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNVATRVQQMLQEYKSLQDI 429

Query: 390 RLIGG 394
             I G
Sbjct: 430 IAILG 434


>gi|332878768|ref|ZP_08446484.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332683296|gb|EGJ56177.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 502

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 159/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  +DG  +L K GD  + I    P   +     +   TGI+VID+  P   G
Sbjct: 89  GRLFNVIGDGVDGLGNLPKEGDNGLPIHRPAPKFEDLSTTTEVLFTGIKVIDLIEPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 208

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D                        K+  V    +E P  R    L+ +T+AEYF     
Sbjct: 209 DAFMESMEKGGWDLSKVDKNALKESKATFVFGQMNEPPGARARVALSGLTVAEYFRDGAG 268

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G
Sbjct: 269 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKHG 326

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 386

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +  +    +  L+ R++E +DI  I G
Sbjct: 387 LGKEHYECAQRVKQLLQRYKELQDIIAILG 416


>gi|170293979|gb|ACB13083.1| ATP synthase beta subunit [Prasiola calophylla]
          Length = 366

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 163/316 (51%), Gaps = 24/316 (7%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           + PS    GR+ N LG+P+D   +LG  D   S+ I    P  ++       F+TGI+V+
Sbjct: 16  VGPSTL--GRIFNVLGEPVD---NLGPVDAKESLPIHRSAPAFVDLDTKLAIFETGIKVV 70

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+  
Sbjct: 71  DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEM 130

Query: 212 --------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
                   DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I 
Sbjct: 131 KESKVINEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIF 190

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ SE+ +L ERI  +  + G+IT++ +V V  D+ 
Sbjct: 191 RFVQAGSEVSALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDL 248

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTH 378
            DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++  
Sbjct: 249 TDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKE 307

Query: 379 LIHRFEETRDIRLIGG 394
            + R++E +DI  I G
Sbjct: 308 TLQRYKELQDIIAILG 323


>gi|20137394|sp|Q92G88|ATPB_RICCN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 473

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 159/319 (49%), Gaps = 25/319 (7%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149
           RI       GR++N +G+PIDG     KGD+    +S   K  P    Q  E     TGI
Sbjct: 80  RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTHQSTECNILVTGI 134

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206
           +VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +  
Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256
            + +   +         K  +V    +E P  R    L+ +TIAE F   ++G +VL  +
Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V 
Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  
Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 373 VQQVLQTYKSLQDIITILG 391


>gi|307343606|emb|CBJ19220.1| atpD synthase beta subunit [Micromonospora auratinigra]
          Length = 298

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFRVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|302567345|gb|ADL41371.1| ATP synthase B subunit [Prasiola crispa]
          Length = 366

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           + PS    GR+ N LG+P+D    +G  +  + I    P  ++       F+TGI+V+D+
Sbjct: 16  VGPSTL--GRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLAIFETGIKVVDL 72

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211
             P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+    
Sbjct: 73  LAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 132

Query: 212 ------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
                 DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 133 SKVINEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 192

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ SE+ +L ERI  +  + G+IT++ +V V  D+  D
Sbjct: 193 VQAGSEVSALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDLTD 250

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   +
Sbjct: 251 PAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKETL 309

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 310 QRYKELQDIIAILG 323


>gi|183206614|gb|ACC54505.1| ATP synthase beta subunit [Musschia aurea]
          Length = 488

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 210 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|56236576|gb|AAV84655.1| ATP synthase beta subunit [Phyllocladus alpinus]
          Length = 424

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---DLGPVDASARSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 151 VIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|3676296|gb|AAD03392.1| mitochondrial ATPase beta subunit [Nicotiana sylvestris]
          Length = 556

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 25/313 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR+IN +G+PID      +GD++    + I  + P  + +   ++   TGI+V+D+ 
Sbjct: 164 ATLGRIINVIGEPIDE-----RGDINTDHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 218

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIED 208
            P   G +IG+F G+G+GK+ L+     +        S+   VGE   E     RE IE 
Sbjct: 219 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFPGVGEPSAEGNDLYREMIES 278

Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
               LGD   +S   +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF
Sbjct: 279 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 338

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  D
Sbjct: 339 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 396

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++ 
Sbjct: 397 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQ 456

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 457 NYKNLQDIIAILG 469


>gi|87311750|ref|ZP_01093865.1| H+-transporting ATP synthase beta chain [Blastopirellula marina DSM
           3645]
 gi|87285534|gb|EAQ77453.1| H+-transporting ATP synthase beta chain [Blastopirellula marina DSM
           3645]
          Length = 503

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 23/333 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+ IDG   +   D  + I    PP        + F+TGI+VID+ TP   G 
Sbjct: 115 GRVFNVLGETIDGRGPIEADDF-LPIHRSSPPVSELSTSTEVFETGIKVIDLLTPFVRGG 173

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213
           + G+F G+G+GK+ +L+ + AR  S      + + VGER RE      E  +  +G    
Sbjct: 174 KAGLFGGAGLGKTVILTELIARIASAHGGYSVFAGVGERTREGTDLWLEMQDTEIGQTGR 233

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             ++++ +V    +E P  R    L+A+T+AEYF  + G + LL +D+I RF+ +  E++
Sbjct: 234 KVIEQTCMVFGQMNEPPGARLRVALSALTMAEYFRDATGADTLLFIDNIFRFSQAGSEVS 293

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G IT+V +V V  D+  DP   +   
Sbjct: 294 ALLGRMPSAVGYQPTLATEMGGLQERI--ASTKSGAITSVQAVYVPADDPTDPAPATAFG 351

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
            LD  I L RS++E+G YP VDPLAS SR+ D  +  A    +   +   + R+ E +DI
Sbjct: 352 QLDAFIYLERSISEKGIYPAVDPLASSSRILDPQYVGARHYAIARRVQTTLQRYRELQDI 411

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     GVD + +     VH+   I  FL Q
Sbjct: 412 IAI----LGVDELSESDKLIVHRARRIERFLSQ 440


>gi|307343724|emb|CBJ19279.1| atpD synthase beta subunit [Micromonospora sp. SG2]
          Length = 302

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|170784769|ref|YP_001718685.1| ATP synthase CF1 beta subunit [Trachelium caeruleum]
 gi|156598793|gb|ABU85650.1| ATP synthase CF1 beta subunit [Trachelium caeruleum]
 gi|157267517|gb|ABV26510.1| ATP synthase CF1 beta subunit [Trachelium caeruleum]
 gi|183206660|gb|ACC54528.1| ATP synthase beta subunit [Trachelium caeruleum]
          Length = 498

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|34536483|dbj|BAC87675.1| beta subunit of ATP synthase [Hafniomonas montana]
          Length = 376

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + S+ I    P  ++       F+TGI+V+D+  P  
Sbjct: 29  ATLGRIFNVLGEPVDNMGPV-SAENSLPIHRTSPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF  +   +VLL +D++ R   +  
Sbjct: 148 EKNLAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDQNKQDVLLFIDNVFRLVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  + ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGAVQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
           V + LD   VL+R+LA +G YP VDPL S S +  + W   +K      S+   + R++E
Sbjct: 266 VFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYDCAQSVKRTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|309812150|ref|ZP_07705908.1| ATP synthase F1, beta subunit [Dermacoccus sp. Ellin185]
 gi|308433837|gb|EFP57711.1| ATP synthase F1, beta subunit [Dermacoccus sp. Ellin185]
          Length = 486

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 162/304 (53%), Gaps = 19/304 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156
           G V NA G  +D    L +G+  +E+     + +  PA ++ +     F+TGI+VID+ T
Sbjct: 105 GHVFNATGDCLD----LEEGE-KLEVNERWGIHRTAPAFDQLESKTTMFETGIKVIDLLT 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGD 212
           P   G +IG+F G+G+GK+ L+  M AR   +     + + VGER RE  +  +E     
Sbjct: 160 PYVQGGKIGLFGGAGVGKTVLIQEMIARVARNHGGVSVFAGVGERTREGNDLMVEMEEAG 219

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            L ++ +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I RF  +  E++T
Sbjct: 220 VLGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVST 279

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + 
Sbjct: 280 LLGRMPSAVGYQPTLADEMGVLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAH 337

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390
           LD    L+R +A  G YP VDPL S SR+ D  + S +  +    +  ++ R +E +DI 
Sbjct: 338 LDATTELSRDIASMGIYPAVDPLTSTSRILDPRYISKEHYETAVRIKSILQRNKELQDII 397

Query: 391 LIGG 394
            I G
Sbjct: 398 AILG 401


>gi|156530213|gb|ABU75203.1| AtpB [Simarouba tulae]
          Length = 471

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|156530207|gb|ABU75200.1| AtpB [Simarouba amara]
          Length = 465

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|156530151|gb|ABU75172.1| AtpB [Perriera madagascariensis]
          Length = 498

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|307343746|emb|CBJ19290.1| atpD synthase beta subunit [Micromonospora sp. SGB14]
          Length = 302

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 143/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R ++ F    + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVANNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|291549078|emb|CBL25340.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus torques
           L2-14]
          Length = 457

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 15/305 (4%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG PID G   L    + +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGLGNPIDEGPQILPDARMDINGLPMNPAA--RCYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209
            L  GQ++ +F+ SG+  + L +  AR       ++ F  V+ + +G    E   FIE +
Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVLGTNENF-AVVFAAMGITFEESNFFIESF 198

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                L ++V+ V  +++  I R   P  A+T AEY + + D +VL+IL  IT +A ++R
Sbjct: 199 RETGALDRTVLFVNLANDPAIERIATPRMALTAAEYLAFEKDMHVLVILTDITNYADALR 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++    E+P  RGYP  ++++L  L ER G    +KG+IT +  + +  D+   PI D 
Sbjct: 259 EVSAARKEVPGRRGYPGYLYTDLATLYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDL 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
              I +G I+L+R L  +G  PP+D L S+SRL DK   A + +    +++  L   +  
Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGAGKTRADHANTMNQLFAAYAR 378

Query: 386 TRDIR 390
            +D +
Sbjct: 379 GKDAK 383


>gi|156530187|gb|ABU75190.1| AtpB [Simaba guianensis]
 gi|156530199|gb|ABU75196.1| AtpB [Simaba orinocensis]
 gi|156530201|gb|ABU75197.1| AtpB [Simaba orinocensis]
          Length = 496

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|113910770|gb|ABI48117.1| ATPase beta subunit [Blepharostoma trichophyllum]
          Length = 455

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|15604633|ref|NP_221151.1| F0F1 ATP synthase subunit beta [Rickettsia prowazekii str. Madrid
           E]
 gi|6226556|sp|O50290|ATPB_RICPR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|3861328|emb|CAA15227.1| ATP SYNTHASE BETA CHAIN (atpD) [Rickettsia prowazekii]
          Length = 474

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 17/316 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI       GR++N +G+PIDG   +    +S  I    P  +N+        TGI+V+
Sbjct: 79  IRIPVGTETLGRIMNVVGEPIDGKGEIKSATIS-SIYKPAPDFINQSTERDILVTGIKVV 137

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + 
Sbjct: 138 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 197

Query: 210 LGD---NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259
           +     NL+     K  +V    +E P  R    L+ +TIAE F   + G +VL  +D+I
Sbjct: 198 IASGVINLEEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNI 257

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+
Sbjct: 258 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADD 315

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R +AE G YP VDPL S S++ D     ++   V+  +  
Sbjct: 316 LTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEKHYGVARQVQQ 375

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 376 VLQTYKSLQDIIAILG 391


>gi|329890939|ref|ZP_08269282.1| ATP synthase F1, beta subunit [Brevundimonas diminuta ATCC 11568]
 gi|328846240|gb|EGF95804.1| ATP synthase F1, beta subunit [Brevundimonas diminuta ATCC 11568]
          Length = 513

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 30/339 (8%)

Query: 79  EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPA 135
           E ++ G  V   G+  ++P      GR++N +G+PID    +    L+ E   + K  P 
Sbjct: 97  EGLTRGQPVVDTGKSIMAPVGPGTLGRIMNVVGQPIDEAGPI----LTTEYRPIHKEAPT 152

Query: 136 MNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKV 190
            + Q        TGI+VID+  P   G + G+F G+G+GK+     L++  A++     V
Sbjct: 153 FDEQSTSAEILVTGIKVIDLICPYTKGGKTGLFGGAGVGKTVTMQELINNIAKAYGGYSV 212

Query: 191 IISLVGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESPILRKMAPLT 237
           +   VGER RE  +   + +  N+              K  +V    +E P  R    LT
Sbjct: 213 LAG-VGERTREGNDLYHEMIESNVNVDPAKNNGSTEGSKCALVYGQMNEPPGARARVALT 271

Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            ++IAEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 272 GLSIAEYFRDEEGKDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGNLQER 331

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +A +  +P VDPL S
Sbjct: 332 I--TSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRDIAAQAIFPAVDPLDS 389

Query: 357 VSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
            SR+ D     +E   V+  +  ++ +++  +DI  I G
Sbjct: 390 TSRIMDPLVIGEEHYQVARRVQEILQQYKALKDIIAILG 428


>gi|307343744|emb|CBJ19289.1| atpD synthase beta subunit [Micromonospora sp. SGA21]
          Length = 320

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|183206682|gb|ACC54539.1| ATP synthase beta subunit [Berenice arguta]
          Length = 482

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 203

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 204 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 263

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 264 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 321

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 322 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 381

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 382 YKELQDIITILG 393


>gi|254173383|ref|ZP_04880056.1| ATP synthase archaeal, B subunit [Thermococcus sp. AM4]
 gi|214032792|gb|EEB73621.1| ATP synthase archaeal, B subunit [Thermococcus sp. AM4]
          Length = 465

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 22/359 (6%)

Query: 19  LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73
           +++ G   S+++ +Y  +  +   + V  G+ V +         GQV+  R NL IV + 
Sbjct: 1   MIMPGMEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVF 60

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130
                 ++    + F     ++  S    GR+ N +GKPIDG   +    + D+    ++
Sbjct: 61  EGTRDLDVKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184
            V  A  R  ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR       
Sbjct: 121 PVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176

Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
            + F  V+ + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+A
Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235

Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EY +   D  VL+IL  +T +A ++REI+    E+P  RGYP  ++++L  + ER G   
Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVR 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +KG+IT +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354


>gi|156530211|gb|ABU75202.1| AtpB [Simarouba glauca]
          Length = 484

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|156530113|gb|ABU75153.1| AtpB [Brucea tenuifolia]
          Length = 488

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|23503639|dbj|BAC20416.1| ATP synthase beta-subunit [Dunaliella parva]
          Length = 376

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 161/309 (52%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG    + S  I    P  ++       F+TGI+V+D+  P   
Sbjct: 32  GRIFNVLGEPVD---NLGPCNANQSNPIHHPSPTFVDLDTRLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY------L 210
           G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +        
Sbjct: 89  GGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFAG-VGERTREGNDLYGEMKESGVIQ 147

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 148 EKNLPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP + +
Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPASAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+RSLA +G YP VDPL S S +  + W   EK     S++   + R++E
Sbjct: 266 TFTHLDACTVLSRSLASKGIYPAVDPLDSTSTML-QPWIVGEKHYSTASNVKGTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|319944942|ref|ZP_08019204.1| ATP synthase F1 sector beta subunit [Lautropia mirabilis ATCC
           51599]
 gi|319741512|gb|EFV93937.1| ATP synthase F1 sector beta subunit [Lautropia mirabilis ATCC
           51599]
          Length = 474

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 25/304 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV++ LG+PID      +G +  E    I    P         +  +TGI+VID+  P 
Sbjct: 91  GRVMDVLGRPIDE-----RGPIQTEEHRGIHQPAPKFDELSPSVELLETGIKVIDLICPF 145

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY----- 209
             G +IG+F G+G+GK+     L++  A+      V    VGER RE  +F  +      
Sbjct: 146 AKGGKIGLFGGAGVGKTVNMLELINNIAKEHSGLSVFAG-VGERTREGNDFYHEMSDAKV 204

Query: 210 -LGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
            + D+L +S V  V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  + 
Sbjct: 205 IVQDDLSQSKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAG 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 265 TEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPA 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +    LD  +VL+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E
Sbjct: 323 TTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNIIGEEHYNVTRGVQATLQRYKE 382

Query: 386 TRDI 389
            RDI
Sbjct: 383 LRDI 386


>gi|255658916|ref|ZP_05404325.1| ATP synthase F1, beta subunit [Mitsuokella multacida DSM 20544]
 gi|260848866|gb|EEX68873.1| ATP synthase F1, beta subunit [Mitsuokella multacida DSM 20544]
          Length = 470

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 97  PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           P    C GRV N LG+ +D + +         I    P    ++   +  +TGI+V+D+ 
Sbjct: 82  PVGTECLGRVFNVLGQTVDHNPAPVGNKEFWPIHRPAPKFDEQETSAQVLETGIKVVDLI 141

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212
            P   G + G+F G+G+GK+ L+     +   +     + + VGER RE  +   +    
Sbjct: 142 APYSKGGKTGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWGEMTES 201

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             + K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++
Sbjct: 202 GVIDKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQHQDVLLFIDNIFRFIQAGSEVS 261

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  DP      +
Sbjct: 262 ALLGRMPSAVGYQPTLSTDIGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPAGTFT 319

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R +AE G YP VDPL S SR+ +     +E  K+   +  ++ +++E +DI
Sbjct: 320 HLDATTVLSRQIAELGIYPAVDPLDSTSRILNAEVLGEEHYKVARGVQAVLQKYKELQDI 379

Query: 390 RLIGG 394
             I G
Sbjct: 380 IAILG 384


>gi|37720963|gb|AAN32484.1| ATP synthase beta subunit [Mayaca fluviatilis]
          Length = 482

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 89  GTTLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    G +VLL +D+I RF  
Sbjct: 206 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|268575600|ref|XP_002642779.1| C. briggsae CBR-ATP-2 protein [Caenorhabditis briggsae]
 gi|187022807|emb|CAP38046.1| CBR-ATP-2 protein [Caenorhabditis briggsae AF16]
          Length = 537

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 18/273 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +   + +  I ++ P  +     ++   TGI+V+D+  P   G 
Sbjct: 151 GRIMNVIGEPIDERGPIPSKNFA-PIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGG 209

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE    D  
Sbjct: 210 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 268

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           G N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 269 GKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 327

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 328 SALLGRIPSAVGYQPTLATDMGGMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 385

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + LD   VL+R +AE   YP VDPL S SR+ D
Sbjct: 386 AHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 418


>gi|254515887|ref|ZP_05127947.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3]
 gi|219675609|gb|EED31975.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3]
          Length = 465

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 154/305 (50%), Gaps = 15/305 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+++ LG PID    +G+ + +  I    P        +   +TGI+VID+  P   G
Sbjct: 83  LGRIMDVLGNPIDERGPIGEQERA-SIHRAAPTYEELSASDDLLETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210
            ++G+F G+G+GK+  +     +       +S+   VGER RE  +F        + D  
Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQESKVVDLE 201

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 202 NPANSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 261

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 262 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFA 319

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  +VL+R +A +G YP VDPL S SR  D     +E       + +++ R++E +DI
Sbjct: 320 HLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLIGNEHYDTARGVQNVLQRYKELKDI 379

Query: 390 RLIGG 394
             I G
Sbjct: 380 IAILG 384


>gi|156530193|gb|ABU75193.1| AtpB [Simaba guianensis]
          Length = 495

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|295084021|emb|CBK65544.1| ATP synthase, F1 beta subunit [Bacteroides xylanisolvens XB1A]
          Length = 505

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 161/328 (49%), Gaps = 48/328 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + D +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKGLNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE      
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 208 ------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS 247
                             DY  + L+KS V  +    +E P  R    L+ +T+AE F  
Sbjct: 210 GEAFKESMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFRD 267

Query: 248 KGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
            G      ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  
Sbjct: 268 AGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TST 325

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+ D
Sbjct: 326 RKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILD 385

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDI 389
                 E   +   +  ++ R +E +DI
Sbjct: 386 PHIVGQEHYDIAQRVKQILQRNKELQDI 413


>gi|156530131|gb|ABU75162.1| AtpB [Gymnostemon zaizou]
 gi|156530133|gb|ABU75163.1| AtpB [Hannoa chlorantha]
          Length = 494

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|113476898|ref|YP_722959.1| F0F1 ATP synthase subunit beta [Trichodesmium erythraeum IMS101]
 gi|123056409|sp|Q10Z38|ATPB_TRIEI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110167946|gb|ABG52486.1| ATP synthase F1, beta subunit [Trichodesmium erythraeum IMS101]
          Length = 484

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 165/310 (53%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N +G+P+D    +G  D S  I  + P  ++ +     F+TGI+V+D+  P  
Sbjct: 95  ATLGRIFNVVGEPVDELGPVGTEDKS-PIHREAPKLVDLETQPSVFETGIKVVDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE      E IE  + 
Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESKVI 212

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265
             +NL +S V  V    +E P  R    L+A+T+AEYF   SK D VLL +D+I RF  +
Sbjct: 213 NPENLSESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVSKQD-VLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +   +    E   V+ ++   + R++
Sbjct: 330 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGKEHYDVARAVQSTLQRYK 389

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 390 ELQDIIAILG 399


>gi|89899957|ref|YP_522428.1| F0F1 ATP synthase subunit beta [Rhodoferax ferrireducens T118]
 gi|123091414|sp|Q21ZA6|ATPB2_RHOFD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|89344694|gb|ABD68897.1| ATP synthase F1, beta subunit [Rhodoferax ferrireducens T118]
          Length = 518

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 153/293 (52%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           R+ +  G  ID + +L   D+    + + PP + R+  +   F+TGI+VID+  PL  G 
Sbjct: 91  RMFDVFGNTIDRETALS--DVQWRSVHRAPPPLARRSTKSEIFETGIKVIDVLMPLERGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ LL+    +       +S+   +GER RE  E   D      L   V
Sbjct: 149 KAGLFGGAGVGKTVLLTEMIHNMVGQHEGVSIFCGIGERCREGEELYRDMKQAGVLPNMV 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++ A  +E P  R      A+T+AEYF   +  ++LL++D+I RF  +  E++   G++P
Sbjct: 209 MIFAQMNEPPGARFRVGHAALTMAEYFRDDEHRDMLLLIDNIFRFIQAGMEVSGLMGQMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL  L ERI  +  + G IT++ +V V  D+  DP A    S L   IV
Sbjct: 269 SRLGYQPTMGTELSGLEERI--ANTDTGAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP +DPL S S++A  +   A    L   +   + ++ E +DI
Sbjct: 327 LSRKRASEGLYPAIDPLQSSSKMATPSIVGARHYGLAQEIRRTLAQYAELKDI 379


>gi|331084155|ref|ZP_08333261.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330402010|gb|EGG81583.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 457

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 27/332 (8%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG+PID G + L    + +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGLGRPIDDGPEILPDARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDY 209
            L  GQ++ +F+ SG+  + L +  AR        + F  V+ + +G    E   F E +
Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGSGENF-AVVFAAMGITFEEANFFTESF 198

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                + ++V+ +  +++  + R   P  A+T AEY + + D +VL+IL  IT +A ++R
Sbjct: 199 KETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKDMHVLVILTDITNYADALR 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++    E+P  RGYP  ++++L  + ER G  + +KG+IT +  + +  D+   PI D 
Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLATMYERAGRQKGKKGSITMIPILTMPEDDKTHPIPDL 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382
              I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L     R
Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFAAYAR 378

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            +E +++ +I G         + A+  + IIY
Sbjct: 379 GKEAKELMVILG---------EAALSDIDIIY 401


>gi|156530203|gb|ABU75198.1| AtpB [Simaba guianensis]
 gi|156530205|gb|ABU75199.1| AtpB [Simaba polyphylla]
          Length = 494

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|156530197|gb|ABU75195.1| AtpB [Simaba insignis]
          Length = 498

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530185|gb|ABU75189.1| AtpB [Simaba cuneata]
          Length = 497

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|118444114|ref|YP_877729.1| V-type ATP synthase subunit B [Clostridium novyi NT]
 gi|171460886|sp|A0PZC7|VATB_CLONN RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|118134570|gb|ABK61614.1| V-type sodium ATP synthase subunit B [Clostridium novyi NT]
          Length = 460

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 153/285 (53%), Gaps = 15/285 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GRV + +G+P DG   +    + D++ E ++       R    +  +TG+  ID 
Sbjct: 82  SEDMLGRVFDGMGRPKDGGPKIIPEERRDINGEPLN----PFARDYPSEFIQTGVSAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIED 208
              L  GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E + FI+D
Sbjct: 138 LNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLGSDSKFAVVFAAMGITFEEAQFFIQD 197

Query: 209 YLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +    ++ ++V+ +  +++  + R   P  A+T AE+ +  KG +VL+I+  +T +A ++
Sbjct: 198 FTKTGSIDRTVLFMNLANDPAVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   PI D
Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
               I +G I+L+R L ++G  PP+D L S+SRL DK    D+ +
Sbjct: 318 LTGYITEGQIILSRELYKKGIMPPIDVLPSLSRLKDKGIGKDKTR 362


>gi|260587501|ref|ZP_05853414.1| V-type sodium ATPase, B subunit [Blautia hansenii DSM 20583]
 gi|260541766|gb|EEX22335.1| V-type sodium ATPase, B subunit [Blautia hansenii DSM 20583]
          Length = 457

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 27/332 (8%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG+PID G + L    + +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGLGRPIDDGPEILPDARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDY 209
            L  GQ++ +F+ SG+  + L +  AR        + F  V+ + +G    E   F E +
Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGSGENF-AVVFAAMGITFEEANFFTESF 198

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                + ++V+ +  +++  + R   P  A+T AEY + + D +VL+IL  IT +A ++R
Sbjct: 199 KETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKDMHVLVILTDITNYADALR 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++    E+P  RGYP  ++++L  + ER G  + +KG+IT +  + +  D+   PI D 
Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLATMYERAGRQKGKKGSITMIPILTMPEDDKTHPIPDL 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382
              I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L     R
Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFAAYAR 378

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            +E +++ +I G         + A+  + IIY
Sbjct: 379 GKEAKELMVILG---------EAALSDIDIIY 401


>gi|227548012|ref|ZP_03978061.1| ATP synthase beta chain [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079918|gb|EEI17881.1| ATP synthase beta chain [Corynebacterium lipophiloflavum DSM 44291]
          Length = 502

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG+ +D D S+G       I    P   + +   +  +TGI+VID+ TP   G 
Sbjct: 124 GHVFNALGECLD-DPSVGVDGERWGIHRDPPAFKDLEGKTEILETGIKVIDLLTPYVKGG 182

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L  + 
Sbjct: 183 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEDMGVLPDTA 242

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 243 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 302

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD    
Sbjct: 303 SAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 360

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           L+RS+A +G YP VDPL S SR+ +     +    V+  +  ++ + +E +DI  I G
Sbjct: 361 LSRSIASKGIYPAVDPLTSTSRILEPGIVGERHYAVAQKVIGILQKNKELQDIIAILG 418


>gi|156530195|gb|ABU75194.1| AtpB [Simaba guianensis]
          Length = 498

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|171191279|gb|ACB45107.1| AtpB [Simaba suffruticosa]
          Length = 476

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530215|gb|ABU75204.1| AtpB [Simarouba versicolor]
          Length = 496

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21684907|emb|CAD11580.1| ATP synthase beta subunit [Mayaca fluviatilis]
          Length = 491

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GTTLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    G +VLL +D+I RF  
Sbjct: 215 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|183206570|gb|ACC54483.1| ATP synthase beta subunit [Jasione heldreichii]
          Length = 488

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 209

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|260814835|ref|XP_002602119.1| hypothetical protein BRAFLDRAFT_125760 [Branchiostoma floridae]
 gi|229287425|gb|EEN58131.1| hypothetical protein BRAFLDRAFT_125760 [Branchiostoma floridae]
          Length = 1164

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 153/306 (50%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG+P+D    +   + ++ I    P   + +     F+TGI+V+D+  P   G 
Sbjct: 115 GRIMNVLGEPVDNQGEI-NAEQTLPIHRNAPAFKDLETKPSIFETGIKVVDLLAPYRRGG 173

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +  E+     +    
Sbjct: 174 KIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYEEMKESGVINEK 232

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 233 SLTDSKVALVYGQMNEPPGARMRVGLTGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 292

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D+  DP   +  
Sbjct: 293 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTTNGSITSIQAVYVPADDLTDPAPATTF 350

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E       +   + R++E +D
Sbjct: 351 AHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGEEHYGTAQRVKSTLQRYKELQD 410

Query: 389 IRLIGG 394
           I  I G
Sbjct: 411 IIAILG 416


>gi|156530139|gb|ABU75166.1| AtpB [Hannoa undulata]
          Length = 496

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|119350553|gb|ABL63227.1| AtpB [Stichococcus bacillaris]
          Length = 390

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +G  +  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          DN
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDN 157

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ SE+ +L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 218 ALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E +D
Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKETLQRYKELQD 334

Query: 389 IRLIGG 394
           I  I G
Sbjct: 335 IIAILG 340


>gi|30265987|gb|AAM33458.1| ATP synthase beta subunit [Coleochaete sp. 489a1]
          Length = 388

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D S +  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDTSKVSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DNL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INSDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKKTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|307343754|emb|CBJ19294.1| atpD synthase beta subunit [Micromonospora sp. SR6]
          Length = 320

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 143/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R ++ F    + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVANNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|282878923|ref|ZP_06287687.1| ATP synthase F1, beta subunit [Prevotella buccalis ATCC 35310]
 gi|281298922|gb|EFA91327.1| ATP synthase F1, beta subunit [Prevotella buccalis ATCC 35310]
          Length = 509

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 42/331 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+ IDG ++L K D S  I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 95  GRMMNVVGQAIDGMEALTK-DNSYPIHREPPKFEDLSTHKEMLATGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D +       GD
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVIKYGD 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG-- 249
             +K++                     +V    +E P  R    L+ +T+AE F  KG  
Sbjct: 214 KFRKAMDEGKWDLSLVDPEALKQSQATLVYGQMNEPPGARASVALSGLTVAEQFRDKGVA 273

Query: 250 -----DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  ++
Sbjct: 274 GQGEHADIMFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGVMQERI--TSTKR 331

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ D  
Sbjct: 332 GSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPL 391

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               E  +    +  ++ R++E +DI  I G
Sbjct: 392 IVGKEHYECAQRVKQILQRYQELQDIIAILG 422


>gi|237714625|ref|ZP_04545106.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D1]
 gi|262406490|ref|ZP_06083039.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_22]
 gi|294646118|ref|ZP_06723781.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CC 2a]
 gi|294808287|ref|ZP_06767045.1| ATP synthase F1, beta subunit [Bacteroides xylanisolvens SD CC 1b]
 gi|298481151|ref|ZP_06999345.1| ATP synthase F1, beta subunit [Bacteroides sp. D22]
 gi|229445394|gb|EEO51185.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D1]
 gi|262355193|gb|EEZ04284.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_22]
 gi|292638562|gb|EFF56917.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CC 2a]
 gi|294444506|gb|EFG13215.1| ATP synthase F1, beta subunit [Bacteroides xylanisolvens SD CC 1b]
 gi|298272725|gb|EFI14292.1| ATP synthase F1, beta subunit [Bacteroides sp. D22]
          Length = 505

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + D +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKGLNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  K+S+                     ++    +E P  R    L+ +T+AE F   G
Sbjct: 210 GEAFKESMEKGHWDLSKVDYNELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFRDAG 269

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   K
Sbjct: 270 KEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTRK 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+ D  
Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILDPH 387

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
               E   +   +  ++ R +E +DI
Sbjct: 388 IVGQEHYDIAQRVKQILQRNKELQDI 413


>gi|183206628|gb|ACC54512.1| ATP synthase beta subunit [Legousia falcata]
          Length = 462

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 68  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 124

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 125 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 183

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 184 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 243

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 244 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 301

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 302 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRLVSDEHYKTAQSVKQTLQR 361

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 362 YKELQDIITILG 373


>gi|170294005|gb|ACB13096.1| ATP synthase beta subunit [Cladophora sp. CHR505640]
          Length = 366

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+P+DG +     + S+ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVVGQPVDGLEDAAHEN-SLPIHRSAPAFVDLDTKSSIFETGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+         
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINE 138

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 139 NNFSESKVAXVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFTQAGSE 198

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKQGSITSIQAVYVPADDLTDPAPATT 256

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV--SSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E 
Sbjct: 257 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYTCAQNVKETLQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|15921726|ref|NP_377395.1| V-type ATP synthase subunit B [Sulfolobus tokodaii str. 7]
 gi|21542308|sp|Q971B6|VATB_SULTO RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=Sul-ATPase beta chain; AltName: Full=V-ATPase
           subunit B
 gi|15622513|dbj|BAB66504.1| 465aa long membrane-associated ATPase beta subunit [Sulfolobus
           tokodaii str. 7]
          Length = 465

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 166/322 (51%), Gaps = 20/322 (6%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   GR   +  S    GR+ N LG+P+D    +  G+        + PA  R+  E
Sbjct: 71  GSKVRFLGRGLEVKISEEMLGRIFNPLGEPLDNGPPVIGGEKRNINGDPINPA-TREYPE 129

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196
           +  +TGI  ID    L  GQ++ +F+GSG+  +TL +  A+            V+ + +G
Sbjct: 130 EFIQTGISAIDGLNSLLRGQKLPIFSGSGLPANTLAAQIAKQATVRGEESNFAVVFAAIG 189

Query: 197 ERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
            R  E    R+F E+    N  +  + V  +++ P L+ + P TA+T+AEY + + D +V
Sbjct: 190 VRYDEALFFRKFFEETGAIN--RVAMFVTLANDPPSLKILTPKTALTLAEYLAFEKDMHV 247

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L IL  +T +  ++RE++ +  E+P   GYP  ++++L  + ER G    +KG+IT +  
Sbjct: 248 LAILIDMTNYCEALRELSASREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMPI 307

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSAD 368
           + +  D+   PI D    I +G IVL+RSL  +G YPP++ L S+SRL      +  + D
Sbjct: 308 LTMPNDDMTHPIPDLTGYITEGQIVLDRSLFNKGIYPPINVLMSLSRLMKDGIGEGKTRD 367

Query: 369 EKKLVSSLTHLIHRFEETRDIR 390
           + K +S+   L   +   +DIR
Sbjct: 368 DHKDLSN--QLFAAYARAQDIR 387


>gi|183206644|gb|ACC54520.1| ATP synthase beta subunit [Rhigiophyllum squarrosum]
          Length = 480

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|171191283|gb|ACB45109.1| AtpB [Simarouba berteroana]
          Length = 495

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|139390159|ref|YP_001123732.1| ATP synthase CF1 beta subunit [Lobularia maritima]
 gi|190358677|sp|A4QLK1|ATPB_LOBMA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286936|dbj|BAF50556.1| ATPase beta subunit [Lobularia maritima]
          Length = 498

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 171/363 (47%), Gaps = 25/363 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAIAMSATEGLKRGMDVIDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVDTGTTS-PIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +NL 
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLA 228

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 406

Query: 392 IGG 394
           I G
Sbjct: 407 ILG 409


>gi|7708149|emb|CAB90103.1| ATP synthase beta subunit [Annona muricata]
          Length = 403

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 10  ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 66

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 67  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESG 125

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    G NVLL +D+I RF  
Sbjct: 126 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQNVLLFIDNIFRFVQ 185

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 186 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 243

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +   A+  +    +     R+
Sbjct: 244 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGAEHYETAQRVKQTSQRY 303

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 304 KELQDIIAILG 314


>gi|300113694|ref|YP_003760269.1| H(+)-transporting two-sector ATPase [Nitrosococcus watsonii C-113]
 gi|299539631|gb|ADJ27948.1| H(+)-transporting two-sector ATPase [Nitrosococcus watsonii C-113]
          Length = 479

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 182/372 (48%), Gaps = 27/372 (7%)

Query: 44  CLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP--- 97
             G+ VV   H+G+  +  GQVI  + ++V    V + E     DL   W RF   P   
Sbjct: 26  AFGERVVIKDHRGQRRN--GQVIFTSGEVVL---VQVFEGTDDLDLERTWVRFLEEPFEI 80

Query: 98  --SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
             S+   GR+ + +G P+D    L    L   +       + R   ++  +TGI  ID  
Sbjct: 81  PLSSEVLGRIFDGVGGPLDDRPPL-IASLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGL 139

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDY 209
             L  GQ++ +F+GSG+  + L +   R       +    V+ + +G    + R F E++
Sbjct: 140 NSLVRGQKLPIFSGSGLPHNRLAAQIVRQAKLLGEETRFVVVFAAMGVTYGDARFFQEEF 199

Query: 210 LGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
               +   VV+ +  +D+ PI R + P  A+T AEY + + D +VL+++  +T +A ++R
Sbjct: 200 ESSGVLGDVVMYLNLADDPPIKRLLLPRAALTCAEYLAFEQDLHVLVVMTDMTHYAEALR 259

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E+AT  G++P  +GYP  ++S+L  + ER G  +  +G+IT V  V +  D+   PI D 
Sbjct: 260 EVATAKGDVPSRKGYPGYLYSDLAEIYERAGRIKDRRGSITMVPVVSMPSDDITHPIPDL 319

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHR 382
              I +G IVL+R L  +G YPPVD   S+SRL        +   D  ++ S L     +
Sbjct: 320 TGYITEGQIVLSRELHHQGIYPPVDIPPSLSRLMKDGIGKNSTREDHPRVASQLYAAYAK 379

Query: 383 FEETRDIRLIGG 394
             E R++  I G
Sbjct: 380 ALEVRNLASIIG 391


>gi|183206600|gb|ACC54498.1| ATP synthase beta subunit [Prismatocarpus sessilis]
          Length = 481

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 210

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 211 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 270

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 271 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 328

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 329 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 388

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 389 YKELQDIITILG 400


>gi|108796901|ref|YP_636199.1| CF1 beta subunit of ATP synthase [Pseudendoclonium akinetum]
 gi|118573722|sp|Q3ZJ68|ATPB_PSEAK RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|56159599|gb|AAV80623.1| CF1 beta subunit of ATP synthase [Pseudendoclonium akinetum]
          Length = 481

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+DG +++   + S+ I  K P  ++       F+TGI+V+D+  P   G 
Sbjct: 99  GRIFNVLGEPVDGLEAVDSKE-SLPIHRKAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIQEKN 217

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           +  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 218 MSASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 277

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 278 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 335

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E +D
Sbjct: 336 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYSCAQNVKETLQRYKELQD 394

Query: 389 IRLIGG 394
           I  I G
Sbjct: 395 IIAILG 400


>gi|156530181|gb|ABU75187.1| AtpB [Simaba glabra]
          Length = 498

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|71032549|ref|XP_765916.1| ATP synthase F1 subunit beta [Theileria parva strain Muguga]
 gi|68352873|gb|EAN33633.1| ATP synthase F1, beta chain, putative [Theileria parva]
          Length = 583

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 28/317 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G  IDG   + K +  + I    P   +++  E    TGI+V+D+  P   G
Sbjct: 185 LGRIMNVTGDAIDGFGPI-KSEHHLPIHRPAPSFEDQKSDEALLITGIKVVDLLAPYAKG 243

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYL------- 210
            +IG+F G+G+GK T+L M   ++  +K     I + VGER RE  E   + L       
Sbjct: 244 GKIGLFGGAGVGK-TVLIMELINNVANKHGGYSIFAGVGERTREGNELYHEMLSTGVIKR 302

Query: 211 -------GDNL----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDS 258
                  GD       K+ +V    +E P  R    LT +T+AEYF   +  +VLL +D+
Sbjct: 303 TIKPNGKGDEADFTGSKASLVYGQMNEPPGARARVALTGLTVAEYFRDEQNQDVLLFIDN 362

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D
Sbjct: 363 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDLGSLQERI--TTTKKGSITSVQAIYVPAD 420

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377
           +  DP   +  + LD   VL+R +AE G YP VDPL S SR+       + +  V+ ++ 
Sbjct: 421 DITDPAPATTFTHLDATTVLSRQIAELGIYPAVDPLDSTSRMLSSHIVGERQYNVARAVQ 480

Query: 378 HLIHRFEETRDIRLIGG 394
            ++  ++  +DI  I G
Sbjct: 481 KILQDYKSLQDIIAILG 497


>gi|183206616|gb|ACC54506.1| ATP synthase beta subunit [Wahlenbergia angustifolia]
          Length = 479

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 200

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 318

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 378

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 379 YKELQDIITILG 390


>gi|3893824|gb|AAD03394.1| ATPase beta subunit [Nicotiana sylvestris]
          Length = 553

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+IN +G+ ID    + K D  + I  + P  + +   ++   TGI+V+D+  P  
Sbjct: 161 ATLGRIINVIGEAIDERGDI-KTDHYLPIHREAPSFVEQATEQQILVTGIKVVDLLAPYQ 219

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208
            G +IG+F G+G+GK+ L+    +  A++     V    VGER  E     R+ IE    
Sbjct: 220 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTPEGNDLYRQMIESGVI 278

Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            LGDN    K  +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +
Sbjct: 279 NLGDNQGESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 338

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ + L  L +RI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 339 NSEVSALLGRIPSAVGYQPTLPTHLGGLQQRI--TTTKKGSITSVQAIYVPADDLTDPAP 396

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R ++E G YP VDPL S SR L+      D       +  ++  ++
Sbjct: 397 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYK 456

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 457 NLQDIIAILG 466


>gi|307343652|emb|CBJ19243.1| atpD synthase beta subunit [Micromonospora pattaloongensis]
          Length = 302

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 143/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+  M  R ++ F    + + VGER RE
Sbjct: 1   LETGIKVLDLLAPYVKGGKIGLFGGAGVGKTVLIQEMIIRVANNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      ++K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIEKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPSTTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEYVGAEHYAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|303234562|ref|ZP_07321199.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           BVS033A4]
 gi|302494396|gb|EFL54165.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           BVS033A4]
          Length = 458

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 185/377 (49%), Gaps = 35/377 (9%)

Query: 44  CLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99
             G+ V  +   SD   +G+V+ IN D V I   G    +S  +  + F    F I+ S 
Sbjct: 25  SFGEVVEVKSSASDKSMVGKVVNINDDTVTIQVFGDSTGMSTQNTKVRFTQRPFEIALSE 84

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR  N +G+PID  GD    K      +  +    ++R       +TGI  ID    
Sbjct: 85  DILGRKFNGIGQPIDDGGDIYAAK---RYNVNGRAINPVSRVYPRDFIQTGISSIDCLMT 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS--------DCFDKVIISLVGERGREVREFIEDY 209
           L  GQ++ VF+GSG+  + L +   R         D F  ++   +G +  E R F ED 
Sbjct: 142 LIRGQKLPVFSGSGMSHNRLAAQIVRQAKIKGANEDNF-AIVFGAIGVKHDEAR-FFEDT 199

Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
              +  L    + V  +D+S + R + P  A+T AEY +  K  +VL+I+  +T +A ++
Sbjct: 200 FRQSGVLNNVCMFVNYADDSIMERIITPRAALTAAEYLAFEKNYHVLVIITDLTSYAEAL 259

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE+++   E+P  +GYP  ++S+L  L ER G  +  +G++T +  + +  D+   PI D
Sbjct: 260 REVSSKREEVPSRKGYPGYLYSDLASLYERAGMIKDAEGSVTLIPILTMPNDDITHPIPD 319

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADE-----KKLVSSLT 377
               I +G IVL RSL ++  YPP++ L S+SRL      + ++ ++      +L SS +
Sbjct: 320 LTGYITEGQIVLERSLMQKDIYPPINVLPSLSRLMKDGIGEGYTREDHPDVSSQLFSSYS 379

Query: 378 HLIHRFEETRDIRLIGG 394
           H+    +E RD+  I G
Sbjct: 380 HV----QEVRDLAQIIG 392


>gi|156530183|gb|ABU75188.1| AtpB [Simaba cedron]
          Length = 479

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|183206618|gb|ACC54507.1| ATP synthase beta subunit [Siphocodon spartioides]
          Length = 443

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 59  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 115

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 116 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 174

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 175 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 234

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 235 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 292

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 293 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 352

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 353 YKELQDIITILG 364


>gi|56758584|gb|AAW27432.1| SJCHGC09424 protein [Schistosoma japonicum]
          Length = 514

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 156/284 (54%), Gaps = 27/284 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PID      +G +  ++MS +    P  ++    ++  +TGI+V+D+  P 
Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206
             G +IG+F G+G+GK+ L+    +  AR+     V    VGER RE  +         +
Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
            D  G+N K S+V     +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +
Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 304 GSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
            ++R     + VL+R++AE G YP VDPL S SR+ D     +E
Sbjct: 362 ATLRP-FRCNPVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEE 404


>gi|171191275|gb|ACB45105.1| AtpB [Simaba cuneata]
          Length = 495

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|262273112|ref|ZP_06050929.1| ATP synthase beta chain [Grimontia hollisae CIP 101886]
 gi|262222868|gb|EEY74176.1| ATP synthase beta chain [Grimontia hollisae CIP 101886]
          Length = 467

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 155/305 (50%), Gaps = 15/305 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG  ID    +G+ +    I  + P   ++    +  +TG++VID+  P   G
Sbjct: 85  LGRIMNVLGDAIDERGDIGEKE-RYSIHREAPSYEDQSNATELLETGVKVIDLVCPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F  +     +    
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 NPAESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD  +VL+R++A  G YP +DPL S SR  D      E   V+  +  ++ R++E +DI
Sbjct: 322 HLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQSVLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|33241040|ref|NP_875982.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81835797|sp|Q7VA76|ATPB_PROMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33238569|gb|AAQ00635.1| ATP synthase beta subunit [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 488

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + K   +  I  + P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPV-KTKTTSPIHREAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|315301530|ref|ZP_07872657.1| ATP synthase F1, beta subunit [Listeria ivanovii FSL F6-596]
 gi|313630100|gb|EFR98106.1| ATP synthase F1, beta subunit [Listeria ivanovii FSL F6-596]
          Length = 456

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 176/354 (49%), Gaps = 21/354 (5%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE--EISLGDLVFHWGR-FRISPSACWCG 103
           ++  HQG     + Q   IN     +  + IGE   +S G +V + G    +       G
Sbjct: 33  EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLSRGTIVVNLGHPIEVPVGEKVLG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R++N  GK IDG       ++   I    P        ++   TGI+VID+  P+  G +
Sbjct: 89  RMLNVYGKAIDGKPE-PDTEVKWPIFRDQPKLSELDTNKEILYTGIKVIDLICPILKGGK 147

Query: 164 IGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGRE----VREFIEDYLGDNLKKS 217
            G+F G+G+GKS L+     +        + + VGER RE     +E  E  +   L ++
Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNAVFTGVGERVREGIGLYKELEESGV---LPQT 204

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            VV+   +ESP +R    LT +TIAEY    +  +VLL +D++ RF  +  E+++  G++
Sbjct: 205 TVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKI 264

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P+  GY +++  E+    +RI  ++   G+IT++  V +  D+ +DP A +  S LD  I
Sbjct: 265 PITGGYQSTLSKEVGDFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDSTI 322

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL RS+A  G +P V+PL S SR  +  +  +    L   +  ++ R+ E ++I
Sbjct: 323 VLERSIAALGIFPAVNPLQSSSRALNPNFVGERHYNLAVQVKFILQRYMELQEI 376


>gi|169824862|ref|YP_001692473.1| V-type ATP synthase subunit B [Finegoldia magna ATCC 29328]
 gi|297587246|ref|ZP_06945891.1| V-type two sector ATPase, V(1) subunit B [Finegoldia magna ATCC
           53516]
 gi|302379572|ref|ZP_07268057.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           ACS-171-V-Col3]
 gi|167831667|dbj|BAG08583.1| V-type sodium ATP synthase subunit B [Finegoldia magna ATCC 29328]
 gi|297575227|gb|EFH93946.1| V-type two sector ATPase, V(1) subunit B [Finegoldia magna ATCC
           53516]
 gi|302312479|gb|EFK94475.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           ACS-171-V-Col3]
          Length = 458

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 185/377 (49%), Gaps = 35/377 (9%)

Query: 44  CLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99
             G+ V  +   SD   +G+V+ IN D V I   G    +S  +  + F    F I+ S 
Sbjct: 25  SFGEVVEVKSSASDKSMVGKVVNINDDTVTIQVFGDSTGMSTQNTKVRFTQRPFEIALSE 84

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR  N +G+PID  GD    K      +  +    ++R       +TGI  ID    
Sbjct: 85  DILGRKFNGIGQPIDDGGDIYAAK---RYNVNGRAINPVSRVYPRDFIQTGISSIDCLMT 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS--------DCFDKVIISLVGERGREVREFIEDY 209
           L  GQ++ VF+GSG+  + L +   R         D F  ++   +G +  E R F ED 
Sbjct: 142 LIRGQKLPVFSGSGMSHNRLAAQIVRQAKIKGANEDNF-AIVFGAIGVKHDEAR-FFEDT 199

Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
              +  L    + V  +D+S + R + P  A+T AEY +  K  +VL+I+  +T +A ++
Sbjct: 200 FRQSGVLNNVCMFVNYADDSIMERIITPRAALTAAEYLAFEKNYHVLVIITDLTSYAEAL 259

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE+++   E+P  +GYP  ++S+L  L ER G  +  +G++T +  + +  D+   PI D
Sbjct: 260 REVSSKREEVPSRKGYPGYLYSDLASLYERAGMIKDAEGSVTLIPILTMPNDDITHPIPD 319

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADE-----KKLVSSLT 377
               I +G IVL RSL ++  YPP++ L S+SRL      + ++ ++      +L SS +
Sbjct: 320 LTGYITEGQIVLERSLMQKDIYPPINVLPSLSRLMKDGIGEGYTREDHPDVSSQLFSSYS 379

Query: 378 HLIHRFEETRDIRLIGG 394
           H+    +E RD+  I G
Sbjct: 380 HV----QEVRDLAQIIG 392


>gi|156530189|gb|ABU75191.1| AtpB [Simaba ferruginea]
          Length = 495

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|156530191|gb|ABU75192.1| AtpB [Simaba glabra]
          Length = 494

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|65332618|gb|AAY42233.1| ATP synthase beta subunit [Poga oleosa]
          Length = 480

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 177/367 (48%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 33  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 93  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLPPYRRGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV-- 220
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  E+ L   +K+S V+  
Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGIGERTRE--ENDLSMEMKESGVINE 207

Query: 221 --VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
             +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E
Sbjct: 208 QNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 267

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 268 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 325

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +
Sbjct: 326 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKZTLQRYKELQ 385

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 386 DIIAILG 392


>gi|5758897|gb|AAD50871.1| ATP synthase beta subunit [Mayaca fluviatilis]
          Length = 496

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    G +VLL +D+I RF  
Sbjct: 221 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|67523719|ref|XP_659919.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
 gi|40745270|gb|EAA64426.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
          Length = 513

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P    +    +   TGI+V+D+  P   G
Sbjct: 125 LGRIVNVTGDPIDERGPI-KATKYAPIHAEAPEFTEQSTTAEILVTGIKVVDLLAPYARG 183

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 242

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 243 DGESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 302

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 303 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 360

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E     + +  ++  ++  +DI
Sbjct: 361 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNTATRVQQMLQEYKSLQDI 420

Query: 390 RLIGG 394
             I G
Sbjct: 421 IAILG 425


>gi|307343692|emb|CBJ19263.1| atpD synthase beta subunit [Micromonospora sp. GUI27]
          Length = 317

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 147/273 (53%), Gaps = 8/273 (2%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184
           I  K P   + +   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   
Sbjct: 3   IHRKAPAFADLEPKTEMLETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVAR 62

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  + I +      + K+ +V    DE P  R    L+A+T+AE
Sbjct: 63  NFGGTSVFAGVGERTREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAE 122

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   K   VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI     
Sbjct: 123 YFRDVKKQEVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRG 182

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LA 361
           +   IT++ ++ V  D++ DP   +  + LD    L RS++++G YP VDPLAS SR LA
Sbjct: 183 QA--ITSMQAIYVPADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILA 240

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +    +  ++ + +  ++ R+++ +DI  I G
Sbjct: 241 PEFVGPEHFQVATEVKRILQRYKDLQDIIAILG 273


>gi|22651726|gb|AAM26935.1| ATP synthase beta subunit [Drosera adelae]
          Length = 487

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
           +   GR+ N LG+PID    +     S   + + PP   +       F+TGI+V+D+  P
Sbjct: 96  SVTLGRIFNVLGQPIDNLGPVATPTTSP--IHRSPPDFIQLETRLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG--- 211
              G + G+F G+G+GK+ L+     +       +S+   VGER RE  +  ++      
Sbjct: 154 YRRGGKTGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 214 INEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDEHYETAQQVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 EVQDIIAILG 401


>gi|319406291|emb|CBI79928.1| ATP synthase beta chain [Bartonella sp. AR 15-3]
          Length = 530

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 21/312 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    +        I  + P  + +    +   TGI+VID+  P  
Sbjct: 136 ATLGRIMNVIGEPVDEFGPI-MATKKRSIHQEAPTYIEQSTESEILVTGIKVIDLLAPYS 194

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G ++G+F G+G+GK+ L+    +  A++     V    VGER RE      E IE  + 
Sbjct: 195 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 253

Query: 212 DNLKKS--------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            + +K          +V    +E P  R    L+ +TIAE F  +G +VL  +D+I RF 
Sbjct: 254 VDPRKHDSTAGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRFT 313

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP
Sbjct: 314 QAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTDP 371

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              +  + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +  ++ R
Sbjct: 372 APATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYAVACQVQTILQR 431

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 432 YKSLQDIIAILG 443


>gi|183206568|gb|ACC54482.1| ATP synthase beta subunit [Jasione laevis]
          Length = 479

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 200

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 318

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 378

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 379 YKELQDIITILG 390


>gi|34500024|gb|AAQ73594.1| ATP synthase beta subunit [Bisgaard Taxon 14]
          Length = 445

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 7/297 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I  + P    +    +  +TGI+VID+  P    
Sbjct: 84  LGRIMNVLGEPIDELGPIGEEE-RWSIHRERPSYEEQSNSTELLETGIKVIDLVCPFAKR 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNLKKSV 218
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+   V
Sbjct: 143 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 202

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
            +V      P   ++   T +TIAE F  +G +VL  +D+I R+  +  E++   G +P 
Sbjct: 203 SLVYGQMNEPPGNRLRVRTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  +VL
Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVL 320

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +R +A  G YP VDP  S SR  D      E  ++   +   + R+++ +DI  I G
Sbjct: 321 SRQIASLGIYPAVDPFDSTSRQFDPLVVGKEHYEVARGVQSTLQRYKDLKDIIAILG 377


>gi|20269400|gb|AAM17927.1| ATP synthase beta subunit [Chimaphila umbellata]
          Length = 482

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 103 GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEIKES 218

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  ++    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 219 GVINEQNIAESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 278

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 279 QAGSEVSALLGRIPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 336

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +  +    DE  K+   +   + R
Sbjct: 337 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKIAQRVKQTLQR 396

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 397 YKELQDIIAILG 408


>gi|13540884|ref|NP_110572.1| V-type ATP synthase subunit B [Thermoplasma volcanium GSS1]
 gi|21542309|sp|Q97CP9|VATB_THEVO RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|14324266|dbj|BAB59194.1| H+-transporting ATP synthase subunit B [Thermoplasma volcanium
           GSS1]
          Length = 460

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 162/318 (50%), Gaps = 17/318 (5%)

Query: 60  GQVI--RINLDIVYI--CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+  R  L IV I     GIG E +   + F     R+  S    GRV N +G+PIDG
Sbjct: 43  GQVLDTRKGLAIVQIFGATTGIGTEGT--RVKFRGETARLPISEDMLGRVFNGIGEPIDG 100

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +  MEI S      +R+   +  +TGI  ID    L  GQ++ +F+GSG+  +
Sbjct: 101 GPEILAKE-RMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHN 159

Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
            L +  AR       S+ F  V+   +G    E   F   +     L +SV+ +  S + 
Sbjct: 160 QLAAQIARQAKVLDSSENF-AVVFGAMGITSEEANYFTNQFRETGALSRSVMFLNLSSDP 218

Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            + R + P  A+T AEY +  K  ++L+IL  +T +  ++REI++   E+P  RGYP  +
Sbjct: 219 SMERIILPRIALTTAEYLAFQKEMHILVILTDMTNYCEALREISSAREEVPGRRGYPGYM 278

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  + ER G  +   G+IT +  + + GD+   P+ D    I +G +V++R L  +G
Sbjct: 279 YTDLSTIYERAGKLKGNNGSITQIPILTMPGDDITHPVPDLTGYITEGQVVVSRDLNRKG 338

Query: 347 RYPPVDPLASVSRLADKA 364
            YP +D L S+SRL ++ 
Sbjct: 339 IYPGIDVLLSLSRLMNQG 356


>gi|183206626|gb|ACC54511.1| ATP synthase beta subunit [Githopsis diffusa]
          Length = 479

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  ++  I    P  ++       F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPID---NLGPVDTRITAPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 200

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 318

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +  S D  +   S+   + R
Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDDHYETAQSVKQTLQR 378

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 379 YKELQDIITILG 390


>gi|11465583|ref|NP_045025.1| ATP synthase CF1 beta subunit [Cyanidium caldarium]
 gi|14547924|sp|Q9TM41|ATPB_CYACA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|6466439|gb|AAF13020.1|AF022186_194 unknown [Cyanidium caldarium]
          Length = 490

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 151/305 (49%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID    +   D  + I    P     +     F+TGI+V+D+  P   G 
Sbjct: 105 GRIFNVLGEPIDEKGPVISND-KLPIHRPAPKFTQLETKPSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGD------- 212
           +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++           
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYQEMKESGVINEKD 223

Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
            NL K  +     +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++
Sbjct: 224 LNLSKVALCYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVS 283

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D+  DP   +  +
Sbjct: 284 ALLGRMPSAVGYQPTLGTEMGALQERI--TSTLDGSITSIQAVYVPADDLTDPAPATTFA 341

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389
            LD   VL+R+LA +G YP VDPL S S +      +DE    +  +   + R++E +DI
Sbjct: 342 HLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPGIVSDEHYTTARKVKETLQRYKELQDI 401

Query: 390 RLIGG 394
             I G
Sbjct: 402 IAILG 406


>gi|327400215|ref|YP_004341054.1| V-type ATP synthase subunit beta [Archaeoglobus veneficus SNP6]
 gi|327315723|gb|AEA46339.1| V-type ATP synthase beta chain [Archaeoglobus veneficus SNP6]
          Length = 471

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 150/285 (52%), Gaps = 15/285 (5%)

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           GD+V      R++ S    GRV++  G PIDG   +   +    I + + P   RQ   +
Sbjct: 72  GDIV------RLACSKDMLGRVLSGSGDPIDGGPKIVPEERREIIGAAINP-YARQYPRE 124

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGE 197
             +TGI  ID    L  GQ++ +F+GSG+  + +    AR            VI + +G 
Sbjct: 125 FIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIALQVARQAKVRGEGEEFAVIFAAMGI 184

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
              E  +F++D+     L+++VV +  +D+  I R + P  A+T AE+ + + D +VL+I
Sbjct: 185 TNEEAYQFMKDFERTGALERAVVFLNLADDPAIERLLTPRMALTAAEFLAYEYDLHVLVI 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  +T +  ++RE++    E+P  RGYP  ++++L  + ER G     KG IT +  + +
Sbjct: 245 LTDMTNYCEALREMSAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMPILTM 304

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            GD+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 305 PGDDITHPIPDLTGYITEGQIVLSRELHAKGIYPPIDVLPSLSRL 349


>gi|319952700|ref|YP_004163967.1| ATP synthase f1 subcomplex beta subunit [Cellulophaga algicola DSM
           14237]
 gi|319421360|gb|ADV48469.1| ATP synthase F1 subcomplex beta subunit [Cellulophaga algicola DSM
           14237]
          Length = 502

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG   L K G   + I  + P   +     +   TGI+VID+  P   G
Sbjct: 90  GRLFNVIGDAIDGLGDLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D+                       K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 210 DDFMHSMEEGGWDLSKVDKKVMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L    
Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +      ++  L+ R++E +DI  I G
Sbjct: 388 LGKEHYACAQNVKELLQRYKELQDIIAILG 417


>gi|116619604|ref|YP_821760.1| F0F1 ATP synthase subunit beta [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122255867|sp|Q02BU1|ATPB_SOLUE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116222766|gb|ABJ81475.1| ATP synthase F1, beta subunit [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 482

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQ--RVEKGFKTGIRVIDIFTPLC 159
           GRV+N +G+P+D    +G  +         P P+   Q  R+E  F+TGI+VID+  P  
Sbjct: 97  GRVLNVIGEPVD---EMGPVNAKKHYPIHRPAPSFEDQSTRLEM-FETGIKVIDLIEPYL 152

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVR----EFIEDYLGD 212
            G +IG+F G+G+GK+ ++     +       +S+   VGER RE      EF E  + D
Sbjct: 153 RGGKIGLFGGAGVGKTVIIQELINNLAMKHGGVSVFAGVGERTREGNDLWLEFQESGVID 212

Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
                  K  ++     E P  R    LT +T+AEYF   +  +VLL +D+I RF  +  
Sbjct: 213 PHDYTKSKCALIYGQMTEPPGARLRVGLTGLTVAEYFRDEEHQDVLLFIDNIFRFTQAGS 272

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V ++ V  D++ DP   +
Sbjct: 273 EVSALLGRMPSAVGYQPNLATEMGELQERI--TSTKNGSITSVQAIYVPADDYTDPAPAT 330

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386
             + LD    L+R +A  G YP VDPLAS SR+ D     ++    + +    + R+++ 
Sbjct: 331 AFAHLDATTNLSRDIAALGIYPAVDPLASTSRILDPHIVGEDHYATAQMVKGTLQRYKDL 390

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 391 QDIIAILG 398


>gi|307343632|emb|CBJ19233.1| atpD synthase beta subunit [Micromonospora endolithica]
          Length = 302

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|307343604|emb|CBJ19219.1| atpD synthase beta subunit [Micromonospora aurantiaca]
          Length = 302

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 11/283 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFEVATEVKR 238

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQS 420
           ++ R+++ +DI  I G     +   DK  VH+   I  FL Q+
Sbjct: 239 ILQRYKDLQDIIAILGIEELSE--EDKITVHRARRIERFLSQN 279


>gi|154001282|gb|ABS57116.1| ATP synthase beta subunit [Araucaria cunninghamii]
          Length = 419

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---DLGPVDARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 151 VIQEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  ++   +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYEIAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|148978361|ref|ZP_01814866.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
 gi|145962520|gb|EDK27798.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
          Length = 467

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  +     + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDECGEIGAEEHYA--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +  
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 203

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR  D      E   +   +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|87080772|dbj|BAE79342.1| ATP synthase beta subunit [Carteria palmata]
          Length = 376

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    +  + I    P  ++       F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVNAEEKLPIHRLAPAFVDLDTRLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 88  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V    +E P  R    L+A+T+AEYF      +VL  +D+I RF  +
Sbjct: 148 EKNLTDS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
               + LD   VL+R+LA +G YP VDPL S S +  + W   EK      S+   + R+
Sbjct: 264 AVTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGCAQSVKKTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|260590640|ref|ZP_05856098.1| ATP synthase F1, beta subunit [Prevotella veroralis F0319]
 gi|260537381|gb|EEX19998.1| ATP synthase F1, beta subunit [Prevotella veroralis F0319]
          Length = 507

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 160/330 (48%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG + L K + +  I  + P   +    ++  +TGI+VID+  P   G 
Sbjct: 95  GRMMNVIGQPIDGMEVL-KMEGAYPIHREAPKFEDLSTHKEMLQTGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L       GD
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGD 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             +K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFRKAMEEGKWDLSLVDPEELQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273

Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  ++G
Sbjct: 274 NGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              E  +    +  L+ ++ E +DI  I G
Sbjct: 392 VGKEHYECAQRVKQLLQKYNELQDIIAILG 421


>gi|170293973|gb|ACB13080.1| ATP synthase beta subunit [Codium platyclados]
          Length = 366

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  + D+   I    P  ++       F+TGI+V+D+  P
Sbjct: 19  ATLGRIFNVLGETVD---NLGPVQADMGFAIHRSAPAFVDLDTKLAIFETGIKVVDLLAP 75

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 76  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 135

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NLK+S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 136 INEQNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 195

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ ++ V  D+  DP  
Sbjct: 196 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKNGSITSIQAIYVPADDLTDPAP 253

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+RSLA +G YP VDPL S S +       DE      ++   + R++
Sbjct: 254 ATTFAHLDATTVLSRSLASKGIYPAVDPLDSTSTMLQPWIVGDEHYDCAQNVKQTLQRYK 313

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 314 ELQDIIAILG 323


>gi|20467397|gb|AAL27829.1| ATPase beta subunit [Pinus strobus]
          Length = 442

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 75  GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 131

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 132 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 190

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 191 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 250

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 251 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 308

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 309 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 367

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 368 RYKELQDIIAI----PGLD 382


>gi|227832900|ref|YP_002834607.1| ATP synthase beta chain [Corynebacterium aurimucosum ATCC 700975]
 gi|262182611|ref|ZP_06042032.1| F0F1 ATP synthase subunit beta [Corynebacterium aurimucosum ATCC
           700975]
 gi|254808142|sp|C3PFR5|ATPB_CORA7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|227453916|gb|ACP32669.1| ATP synthase beta chain [Corynebacterium aurimucosum ATCC 700975]
          Length = 482

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D    LG+ D     + + PPA ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-QPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  S K K +IT++ +V V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            L+R +A +G YP V+PL S SR+ + +   +   ++   +  ++ + +E +DI  I G
Sbjct: 339 ELDRGIASKGIYPAVNPLTSTSRILEPSIVGERHYEVAQRVIGILQKNKELQDIIAILG 397


>gi|197132376|gb|ACH47706.1| ATP synthase CF1 beta subunit [Geranium macrorrhizum]
          Length = 501

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 107 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 163

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 164 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 222

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + ++ K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 223 GVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFV 282

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 283 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +  SA+  ++   +   + R
Sbjct: 341 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVSAEHYEIAQRVKETLQR 400

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 401 YKELQDI 407


>gi|237688477|ref|YP_002905096.1| ATP synthase CF1 beta subunit [Picea sitchensis]
 gi|237688609|ref|YP_002905226.1| ATP synthase CF1 beta subunit [Pinus gerardiana]
 gi|324986376|ref|YP_004276248.1| ATP synthase CF1 beta subunit [Pinus lambertiana]
 gi|226875305|gb|ACO89044.1| ATP synthase CF1 beta subunit [Picea sitchensis]
 gi|226876069|gb|ACO89325.1| ATP synthase CF1 beta subunit [Pinus gerardiana]
 gi|228016133|gb|ACP50970.1| ATP synthase CF1 beta subunit [Pinus sibirica]
 gi|228016199|gb|ACP51035.1| ATP synthase CF1 beta subunit [Pinus squamata]
 gi|228016260|gb|ACP51095.1| ATP synthase CF1 beta subunit [Pinus strobus]
 gi|228016640|gb|ACP51469.1| ATP synthase CF1 beta subunit [Pinus albicaulis]
 gi|228016771|gb|ACP51598.1| ATP synthase CF1 beta subunit [Pinus armandii]
 gi|228016895|gb|ACP51720.1| ATP synthase CF1 beta subunit [Pinus ayacahuite]
 gi|228017141|gb|ACP51962.1| ATP synthase CF1 beta subunit [Pinus cembra]
 gi|228017264|gb|ACP52083.1| ATP synthase CF1 beta subunit [Pinus flexilis]
 gi|228017329|gb|ACP52147.1| ATP synthase CF1 beta subunit [Pinus lambertiana]
 gi|228017522|gb|ACP52337.1| ATP synthase CF1 beta subunit [Pinus monticola]
 gi|228017585|gb|ACP52399.1| ATP synthase CF1 beta subunit [Pinus parviflora var. pentaphylla]
 gi|228017649|gb|ACP52462.1| ATP synthase CF1 beta subunit [Pinus peuce]
 gi|323514225|gb|ADX89772.1| ATP synthase CF1 beta subunit [Pinus lambertiana]
          Length = 492

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|183206520|gb|ACC54458.1| ATP synthase beta subunit [Triodanis perfoliata]
          Length = 468

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 74  GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 130

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 131 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 189

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 190 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 249

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 250 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 307

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 308 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 367

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 368 YKELQDIITILG 379


>gi|258512716|ref|YP_003186150.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479442|gb|ACV59761.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 467

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 164/327 (50%), Gaps = 16/327 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+ ID    +   +    I    P   +     + F+TGI+V+D+  P   G
Sbjct: 88  LGRIFNVLGETIDERGPVDAPE-RWPIHRPAPAFGDLTTKTEIFETGIKVVDLLAPYVKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+ L+     +   +     + + VGER RE  +   +      L K+
Sbjct: 147 GKVGLFGGAGVGKTVLIQELIHNIAKEHGGYSVFAGVGERTREGNDLYHEMKESGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    L+ +T+AEYF   +  +VL  +D+I RF  +  E++   G +
Sbjct: 207 CMVFGQMNEPPGARLRVALSGLTLAEYFRDVEQRDVLFFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+ +L ERI  +   +G+IT++ +V V  D++ DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGQLQERI--ASTVRGSITSIQAVYVPADDYTDPAPANTFTHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGY 395
           VL R +A+ G YP VDPLAS SR        +E   V+  +  ++ R+ E +DI  I G 
Sbjct: 325 VLERRIADMGLYPAVDPLASTSRALQPDIVGEEHYQVARGVQAVLQRYRELQDIIAILGM 384

Query: 396 RPGVD---LILDKAVHQVPIIYDFLKQ 419
               D   LI+ +A      I +FL Q
Sbjct: 385 DELTDEDRLIVSRARK----IQNFLSQ 407


>gi|124026543|ref|YP_001015658.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str.
           NATL1A]
 gi|166201725|sp|A2C4I4|ATPB_PROM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123961611|gb|ABM76394.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. NATL1A]
          Length = 488

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    L K   +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGDL-KNVTTSPIHRSAPSLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            ++L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 SEDLTKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|29565615|ref|NP_817194.1| ATP synthase CF1 beta subunit [Pinus koraiensis]
 gi|75328468|sp|Q85X24|ATPB_PINKO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|29469714|gb|AAO74042.1| H+-ATPase beta subunit [Pinus koraiensis]
          Length = 490

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|307343700|emb|CBJ19267.1| atpD synthase beta subunit [Micromonospora sp. GUI40]
          Length = 317

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 147/273 (53%), Gaps = 8/273 (2%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184
           I  K P   + +   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   
Sbjct: 3   IHRKAPAFADLEPKTEMLETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVAR 62

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  + I +      + K+ +V    DE P  R    L+A+T+AE
Sbjct: 63  NFGGTSVFAGVGERTREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAE 122

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF   K   VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI     
Sbjct: 123 YFRDVKKQEVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRG 182

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LA 361
           +   IT++ ++ V  D++ DP   +  + LD    L RS++++G YP VDPLAS SR LA
Sbjct: 183 QA--ITSMQAIYVPADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILA 240

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +    +  ++ + +  ++ R+++ +DI  I G
Sbjct: 241 PEFVGPEHFQVATEVKRILQRYKDLQDIIAILG 273


>gi|183206574|gb|ACC54485.1| ATP synthase beta subunit [Jasione crispa]
          Length = 480

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 201

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|170293997|gb|ACB13092.1| ATP synthase beta subunit [Uronema sp. CCAP384/2]
          Length = 366

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +  + I    P   +       F+TGI+V+D+  P  
Sbjct: 21  LGRIFNVLGEPVD---NLGPVETEQKLPIHRPAPAFTDLDTRLAIFETGIKVVDLLAPYR 77

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 78  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVIV 137

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 138 ESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 197

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       DE   +   +   + R++E 
Sbjct: 256 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYGIAQKVKQTLQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|309322170|ref|YP_003934085.1| ATP synthase CF1 beta subunit [Geranium palmatum]
 gi|197132378|gb|ACH47707.1| ATP synthase CF1 beta subunit [Geranium palmatum]
 gi|300069263|gb|ADJ66384.1| ATP synthase CF1 beta subunit [Geranium palmatum]
          Length = 497

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 218

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + ++ K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 219 GVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFV 278

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 279 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 336

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +  SA+  ++   +   + R
Sbjct: 337 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVSAEHYEIAQRVKETLQR 396

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 397 YKELQDI 403


>gi|4063540|gb|AAC98328.1| ATP synthase beta subunit [Cistus x revolii]
          Length = 456

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  +  I +  P  +  +     F+TGI+V+D+  P 
Sbjct: 78  GVTLGRIFNVLGEPVDNLGPVDTGT-TAPIHNSAPAFVQLETKLSIFETGIKVVDLLAPY 136

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 137 RRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVGERTREGNDLYMEMKESGVI 196

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 197 NEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 256

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 257 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 314

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    +  ++   +   + R++E
Sbjct: 315 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGKEHYEIAQQVKQTLQRYKE 374

Query: 386 TRDI 389
            +DI
Sbjct: 375 LQDI 378


>gi|42559024|gb|AAS20198.1| ATP synthase beta subunit [Flagellaria indica]
          Length = 479

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 202

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 203 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 262

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 263 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 320

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  ++   +   + R
Sbjct: 321 APATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQR 380

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 381 YKELQDIIAILG 392


>gi|259487710|tpe|CBF86592.1| TPA: ATP synthase beta chain, mitochondrial (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 518

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P    +    +   TGI+V+D+  P   G
Sbjct: 130 LGRIVNVTGDPIDERGPI-KATKYAPIHAEAPEFTEQSTTAEILVTGIKVVDLLAPYARG 188

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 189 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 247

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 248 DGESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 307

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 308 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 365

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D     +E     + +  ++  ++  +DI
Sbjct: 366 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNTATRVQQMLQEYKSLQDI 425

Query: 390 RLIGG 394
             I G
Sbjct: 426 IAILG 430


>gi|183206510|gb|ACC54453.1| ATP synthase beta subunit [Platycodon grandiflorum]
          Length = 488

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 40  KGRDTLGQPIHVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDLGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
             +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 217 FAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +      +DE  ++  S+   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYEIAQSVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 ITILG 399


>gi|198464543|ref|XP_001353265.2| GA18845 [Drosophila pseudoobscura pseudoobscura]
 gi|198149765|gb|EAL30768.2| GA18845 [Drosophila pseudoobscura pseudoobscura]
          Length = 675

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 172/345 (49%), Gaps = 26/345 (7%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +IV    +   E I  G  V   G   R++      GR++N +G PID      +G++  
Sbjct: 176 NIVRCVAMDATEGIKRGQKVVDTGYPIRVAVGKAVLGRILNVVGDPIDE-----RGEVKS 230

Query: 127 EIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178
           E  S +    P +    V+     TGI+VID+  P   G +IG+F G+G+GK+ L+    
Sbjct: 231 EYHSFIHTEAPVLTELSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELI 290

Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIEDY---LGDNLKKSVVVVATSDESPILR 231
           +  A++     V +   GER RE      E IE     L ++  K V+V    +E P  R
Sbjct: 291 NNIAKAHGGYSVFVG-AGERTREGNDLYHEMIESKVISLEEDTSKVVLVFGQMNEPPGAR 349

Query: 232 KMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +TIAEYF    G +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 350 SRVVLTGLTIAEYFRDIDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDM 409

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +    G+IT+V +V V  D+ +DP   +  + LD   VL+R +AE G YP 
Sbjct: 410 GTMQERI--TSTRNGSITSVQAVYVPADDLSDPAPAATFTHLDATTVLSRPIAELGIYPA 467

Query: 351 VDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VDPL S SR+ D     +E   +  ++   +  ++  +DI  I G
Sbjct: 468 VDPLDSSSRILDPDVVGEEHYNVARAVQKTLQGYKSLQDIIAILG 512


>gi|20467393|gb|AAL27827.1| ATPase beta subunit [Pinus peuce]
          Length = 442

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 76  GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 132

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 133 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 191

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 192 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 251

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 252 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 309

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 310 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 368

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 369 RYKELQDIIAI----PGLD 383


>gi|307343674|emb|CBJ19254.1| atpD synthase beta subunit [Micromonospora sp. GUI3]
 gi|307343676|emb|CBJ19255.1| atpD synthase beta subunit [Micromonospora sp. GUI8]
 gi|307343706|emb|CBJ19270.1| atpD synthase beta subunit [Micromonospora sp. GUI43]
 gi|307343726|emb|CBJ19280.1| atpD synthase beta subunit [Micromonospora sp. SG8]
 gi|307343748|emb|CBJ19291.1| atpD synthase beta subunit [Micromonospora sp. SR1]
          Length = 302

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGNEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|307343608|emb|CBJ19221.1| atpD synthase beta subunit [Micromonospora carbonacea]
          Length = 298

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K  +VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQDVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|183206656|gb|ACC54526.1| ATP synthase beta subunit [Petromarula pinnata]
          Length = 498

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++     
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFGGVGERTREGNDLYKEMKDSG 220

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIITILG 409


>gi|15425592|emb|CAC60263.1| ATP synthase beta subunit [Pseudonemacladus oppositifolius]
          Length = 482

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTAPIHRSAPAFIELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 217

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 218 GVIKEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIITILG 407


>gi|159040926|ref|YP_001540178.1| V-type ATP synthase subunit B [Caldivirga maquilingensis IC-167]
 gi|157919761|gb|ABW01188.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Caldivirga maquilingensis IC-167]
          Length = 477

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 181/363 (49%), Gaps = 18/363 (4%)

Query: 43  VCLGDFVVHQGKNSD-NLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSA 99
           +  G+  V  G + +  L QVI +  D  I  +    +G   S   + F+    R+  S 
Sbjct: 32  ISYGEMGVVTGPDGEPRLIQVIEVGPDYAIAQVLTGTLGLPASGSTVRFYGTTLRLPVSE 91

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+I+  G P D   S+   +  +++  +      R   E+  +TG+  ID    + 
Sbjct: 92  DLLGRIISGRGVPRD-SLSMPPAEDFLDVNGEPLNPYARDYPEEPIETGVSAIDGLYTMV 150

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN 213
            GQ++ +F+G+G+  + L +  AR      S+    ++ + +G R  E   FI+++    
Sbjct: 151 RGQKLPIFSGTGLPHNMLAAQVARQATVRGSEEEFAIVFAAIGLRTEEALFFIDEFRRTG 210

Query: 214 LKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
             + +V+V      PI  R + P  A+TIAEY + + D +VL+IL  +  +A ++RE+++
Sbjct: 211 ALRRLVLVMNLASDPIAERILTPRVALTIAEYLAWQRDYHVLVILSDMLNYAEALRELSS 270

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             GELP  RGYP  ++++L  + ER G +   KG++T    + +  D+   P+ D    I
Sbjct: 271 AKGELPGRRGYPGYMYTDLASIFERAGRARGRKGSVTQFPILTMPHDDITHPVPDLTGYI 330

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA----WSADEKKLVSSLTHLIHRFEETR 387
            +G +VL+RS+  +G YPP D L S+SRL   A     + D+ K V++   LI  +    
Sbjct: 331 TEGQLVLSRSMWGKGIYPPFDVLMSLSRLMKDAVGEGKTRDDHKYVAN--QLISAYSRAL 388

Query: 388 DIR 390
           D+R
Sbjct: 389 DVR 391


>gi|193212719|ref|YP_001998672.1| F0F1 ATP synthase subunit beta [Chlorobaculum parvum NCIB 8327]
 gi|193086196|gb|ACF11472.1| alternate F1F0 ATPase, F1 subunit beta [Chlorobaculum parvum NCIB
           8327]
          Length = 508

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 155/293 (52%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQ 162
           R+ +  G  ID    L   +++   +   PP ++R+  + + F+TGI++ID+  PL  G 
Sbjct: 108 RMFDVFGNAIDRGGPLS--NVTWRSVHGAPPPLSRRSTKAEVFQTGIKIIDLLVPLERGG 165

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ LL+    +    +  +S+   +GER RE  E   D      L   V
Sbjct: 166 KAGLFGGAGVGKTVLLTEMIHNMVSTESGVSIFCGIGERCREGEELYRDMSEAGVLDNMV 225

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    L A+T+AEYF      +VLL++D+I RF  +  EI+  +G++P
Sbjct: 226 MVFGQMNEPPGSRFRVGLAALTMAEYFRDDLHQDVLLLIDNIFRFIQAGSEISGMTGQMP 285

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL  L ERI  +    G IT++ +V V  D+  DP A    S L   +V
Sbjct: 286 SRLGYQPTIGTELSALEERI--ANTGTGAITSIQAVYVPADDFTDPAAVHTFSHLSASLV 343

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP VDPL+S S++A ++        L   +  ++ ++ E +DI
Sbjct: 344 LSRKRAGEGFYPAVDPLSSGSKMAGESIVGRRHYDLAREVRRVLAQYAELKDI 396


>gi|113910776|gb|ABI48120.1| ATPase beta subunit [Trichocolea tomentella]
          Length = 453

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 64  ATLGRIFNVLGEPVD---NLGPVDASTSFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 120

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 121 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 180

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 181 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 240

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 241 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 298

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 299 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 357

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 358 KELQDIIAISG 368


>gi|325970977|ref|YP_004247168.1| V-type ATP synthase beta chain [Spirochaeta sp. Buddy]
 gi|324026215|gb|ADY12974.1| V-type ATP synthase beta chain [Spirochaeta sp. Buddy]
          Length = 473

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 143/274 (52%), Gaps = 9/274 (3%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +S S    GRV+N LGK  DG  ++  G    ++  +      R+      +TGI VID 
Sbjct: 96  LSVSEQMLGRVMNGLGKSRDGSGTV-HGFAERDVNGEPINPTAREYPRDFIQTGISVIDG 154

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGERGREVREFIED 208
            T L  GQ++ +F+G+G+  + L +  AR            ++ + +G +    R FI+ 
Sbjct: 155 MTTLIQGQKLPIFSGNGMDHNQLAAQIARQAKVRGSSGDFCIVFAAMGVKYDVARFFIDS 214

Query: 209 YLGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +    +  +V + ++ +D+  I R + P TA+T+AEY +  KG  VL+I+  +T +  S+
Sbjct: 215 FEETGVTDNVALFLSLADDPSIERTITPKTALTLAEYLAFDKGKQVLVIMTDMTNYCESL 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI T  GE+P  +GYP  ++S L  L ER G      G+IT +  + +  D+ + P+ D
Sbjct: 275 REIGTMRGEIPSRKGYPGYLYSNLAELYERSGKISGRSGSITQLPILSMPNDDISHPVPD 334

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               I +G IV  R +   G YPP++ L S+SRL
Sbjct: 335 LTGYITEGQIVFERGMQARGIYPPINCLPSLSRL 368


>gi|307343670|emb|CBJ19252.1| atpD synthase beta subunit [Polymorphospora rubra]
          Length = 301

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+ L+  M  R ++ F    + + VGER RE
Sbjct: 1   LETGIKVLDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVANNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVINKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E   V+S +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHYAVASEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|119350521|gb|ABL63211.1| AtpB [Neochloris vigensis]
          Length = 390

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ +D    +   + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 38  GRIFNVLGEAVDNMGPVQNME-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 96

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 97  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 156

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 157 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 214

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 215 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 272

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   EK  +   S+   + R++E 
Sbjct: 273 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEKHYECAQSVKRTLQRYKEL 331

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 332 QDIIAILG 339


>gi|183206664|gb|ACC54530.1| ATP synthase beta subunit [Campanula cretica]
          Length = 498

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRVVSDEHYKTAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|113910954|gb|ABI48209.1| ATPase beta subunit [Cephalotaxus harringtonia]
          Length = 467

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 177/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K++D  GQ IR+  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KDNDTTGQPIRVTCEVQQLLGNNKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGETTLGR 83

Query: 105 VINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  G L+   + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 199

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E+
Sbjct: 200 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 259

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 260 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 317

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E +D
Sbjct: 318 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQD 377

Query: 389 IRLIGG 394
           I  I G
Sbjct: 378 IIAILG 383


>gi|21684893|emb|CAD11573.1| ATP synthase beta subunit [Flagellaria indica]
          Length = 491

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 214 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  ++   +   + R
Sbjct: 332 APATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|59713171|ref|YP_205947.1| F0F1 ATP synthase subunit beta [Vibrio fischeri ES114]
 gi|81310858|sp|Q5E1N7|ATPB_VIBF1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|59481272|gb|AAW87059.1| ATP synthase F1, beta subunit [Vibrio fischeri ES114]
          Length = 467

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 23/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N LG  ID       GD+  E    I  + P    +    +  +TG++VID+  P 
Sbjct: 86  GRIMNVLGDAIDE-----CGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPF 140

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGD 212
             G +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    
Sbjct: 141 AKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVV 200

Query: 213 NLKKS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
           N++K       +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  
Sbjct: 201 NIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGT 260

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +
Sbjct: 261 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPAT 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD  +VLNR++A  G YP +DPL S SR  D      E   +   +   + R++E 
Sbjct: 319 TFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKEL 378

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 379 KDIIAILG 386


>gi|119386525|ref|YP_917580.1| F0F1 ATP synthase subunit beta [Paracoccus denitrificans PD1222]
 gi|190358696|sp|A1B8P0|ATPB_PARDP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119377120|gb|ABL71884.1| ATP synthase F1 subcomplex beta subunit [Paracoccus denitrificans
           PD1222]
          Length = 474

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + +   +  I  + P    +    +   TGI+VID+  P  
Sbjct: 84  ATLGRILNVVGEPVDEGGPV-EATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYS 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE  +   + +    
Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMVESGV 200

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
              D+L KS V  V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 201 IKPDDLSKSQVALVYGQMNEPPGARMRVALTGLTVAEQFRDATGTDVLFFVDNIFRFTQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R+++E G YP VDPL S SR+ D A   +E   V+  +  ++ +++
Sbjct: 319 ATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRILDPAVVGEEHYQVARDVQGILQKYK 378

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 379 SLQDIIAILG 388


>gi|14718056|gb|AAK72769.1| ATP synthase beta subunit [Flagellaria indica]
          Length = 481

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 211

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 212 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  ++   +   + R+
Sbjct: 330 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|307343712|emb|CBJ19273.1| atpD synthase beta subunit [Micromonospora sp. CR18]
          Length = 302

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|240102205|ref|YP_002958513.1| V-type ATP synthase subunit B [Thermococcus gammatolerans EJ3]
 gi|259710377|sp|C5A337|VATB_THEGJ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|239909758|gb|ACS32649.1| Archaeal/vacuolar-type H+-ATPase, subunit B (atpB) [Thermococcus
           gammatolerans EJ3]
          Length = 463

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%)

Query: 27  SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81
           S+++ +Y  +  +   + V  G+ V +         GQV+  R NL IV +       +I
Sbjct: 7   STVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDI 66

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138
               + F     ++  S    GR+ N +GKPIDG   +    + D+    ++ V  A  R
Sbjct: 67  KTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 126

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191
             ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+
Sbjct: 127 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVV 181

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY +   D
Sbjct: 182 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 241

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL+IL  +T +A ++REI+    E+P  RGYP  ++++L  + ER G    +KG+IT 
Sbjct: 242 MQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQ 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 302 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 352


>gi|113910840|gb|ABI48152.1| ATPase beta subunit [Archidium alternifolium]
          Length = 472

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  K    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYKTAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|55379722|ref|YP_137572.1| V-type ATP synthase subunit B [Haloarcula marismortui ATCC 43049]
 gi|74552436|sp|Q5UXY7|VATB_HALMA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|55232447|gb|AAV47866.1| V-type sodium ATP synthase subunit B [Haloarcula marismortui ATCC
           43049]
          Length = 470

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PIDG   +   D   +I+ +     +R+  E+  +TG+  ID    L  G
Sbjct: 84  LGRVMDGTGQPIDGGPEIVP-DERRDIVGEAINPFSREYPEEFIQTGVSAIDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGREVREFIED 208
           Q++ +F+ SG+  + L    AR                   VI   +G    E  EF++D
Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEEEDGEDDEGSEFAVIFGAMGITAEEANEFMDD 202

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
           +     L++SVV +  +D+  + R + P  A+T AEY + + D +VL+IL  +T +  ++
Sbjct: 203 FERTGALERSVVFMNLADDPAVERTITPRLALTTAEYLAFEKDYHVLVILTDMTNYCEAL 262

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI     E+P  RGYP  ++++L +L ER G  E  +G++T +  + + GD+   PI D
Sbjct: 263 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQLPILTMPGDDDTHPIPD 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
               I +G I ++R L  +G  PP++ L S+SRL D
Sbjct: 323 LTGYITEGQIYIDRDLNSQGIQPPINVLPSLSRLMD 358


>gi|307343626|emb|CBJ19230.1| atpD synthase beta subunit [Micromonospora echinaurantiaca]
          Length = 302

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    D+ P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDKPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    D  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQDHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|262400757|gb|ACY66246.1| ATP synthase CF1 beta subunit [Brassica napus]
          Length = 498

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 179/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D L+   + K  PA ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + + L
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 225

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 226 NLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|227827832|ref|YP_002829612.1| V-type ATP synthase subunit B [Sulfolobus islandicus M.14.25]
 gi|227830542|ref|YP_002832322.1| V-type ATP synthase subunit B [Sulfolobus islandicus L.S.2.15]
 gi|229579355|ref|YP_002837753.1| V-type ATP synthase subunit B [Sulfolobus islandicus Y.G.57.14]
 gi|229581885|ref|YP_002840284.1| V-type ATP synthase subunit B [Sulfolobus islandicus Y.N.15.51]
 gi|229585102|ref|YP_002843604.1| V-type ATP synthase subunit B [Sulfolobus islandicus M.16.27]
 gi|238620005|ref|YP_002914831.1| V-type ATP synthase subunit B [Sulfolobus islandicus M.16.4]
 gi|284998038|ref|YP_003419805.1| ATP synthase, B subunit [Sulfolobus islandicus L.D.8.5]
 gi|259710371|sp|C3N6D4|VATB_SULIA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|259710372|sp|C4KHU9|VATB_SULIK RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|259710373|sp|C3MQL4|VATB_SULIL RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|259710374|sp|C3MW92|VATB_SULIM RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|259710375|sp|C3NGV2|VATB_SULIN RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|259710376|sp|C3NEU2|VATB_SULIY RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|227456990|gb|ACP35677.1| ATP synthase, B subunit [Sulfolobus islandicus L.S.2.15]
 gi|227459628|gb|ACP38314.1| ATP synthase, B subunit [Sulfolobus islandicus M.14.25]
 gi|228010069|gb|ACP45831.1| ATP synthase, B subunit [Sulfolobus islandicus Y.G.57.14]
 gi|228012601|gb|ACP48362.1| ATP synthase, B subunit [Sulfolobus islandicus Y.N.15.51]
 gi|228020152|gb|ACP55559.1| ATP synthase, B subunit [Sulfolobus islandicus M.16.27]
 gi|238381075|gb|ACR42163.1| ATP synthase, B subunit [Sulfolobus islandicus M.16.4]
 gi|284445933|gb|ADB87435.1| ATP synthase, B subunit [Sulfolobus islandicus L.D.8.5]
 gi|323477641|gb|ADX82879.1| ATP synthase, B subunit [Sulfolobus islandicus HVE10/4]
          Length = 463

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 18/312 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+ N LG  +D    + KG+      S + PA  R+  E+  +TGI  ID    
Sbjct: 84  SEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAA-REYPEEFIQTGISAIDGLNA 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208
           L  GQ++ +F+GSG+  + L +  A+            V+ + +G R  +    R+F E+
Sbjct: 143 LLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFAAIGARYDDALFFRKFFEE 202

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
               N  +  ++V+ ++E P+++ + P TA+T+AEY + + D +VL IL  +T +  ++R
Sbjct: 203 TGAIN--RVAMIVSLANEPPVMKTLTPKTALTLAEYLAFEQDMHVLAILIDMTNYCEALR 260

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+    E+P   GYP  ++++L  + ER G    +KG+IT +  + +  D+   PI D 
Sbjct: 261 EISAAREEVPGRGGYPGYMYTDLATIYERAGKVLGKKGSITQMPILTMPNDDITHPIPDL 320

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHR 382
              I +G IVL+R+L  +G YPP++ L S+SRLA           D K + + L     R
Sbjct: 321 TGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSNQLFASYAR 380

Query: 383 FEETRDIRLIGG 394
             +TR +  I G
Sbjct: 381 AVDTRGLAAIIG 392


>gi|313887580|ref|ZP_07821263.1| ATP synthase ab C terminal domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846458|gb|EFR33836.1| ATP synthase ab C terminal domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 463

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 21/364 (5%)

Query: 49  VVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVI 106
           +   GK S+ +GQVI+I+ D  +V +    +G       + F    F I  S+   GRV 
Sbjct: 33  ISKDGKRSE-IGQVIKIDEDRAVVQVFGNNLGVSTKNTKVEFSAHPFEIPLSSDILGRVF 91

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N    PID   ++   D+       + P+  R+      +TGI  ID    L  GQ++ +
Sbjct: 92  NGTAVPIDKGGAIYSKDVYNINGRPINPSA-REYPRNFIQTGISSIDGLMTLIRGQKLPI 150

Query: 167 FAGSGIGKSTLLSMFARS---------DCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
           F+GSG+  + + +   R          D F  ++ + +G +  E   F E +    +   
Sbjct: 151 FSGSGLPHNEVAAQIVRQAKIADEGGKDNF-AIVFAAIGVKHDEADFFRESFKNSGVIDK 209

Query: 218 VVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGE 275
           VV+     + PI+ ++ AP  A+T AEY +  K   VL+I+  IT +A ++RE++++  E
Sbjct: 210 VVMYINYADDPIMERLIAPKCALTAAEYLAFEKNMQVLVIMTDITSYAEALREVSSSREE 269

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P  +GYP  ++S+L  L ER G  +  +G++T +  + +  D+   PI D    I +G 
Sbjct: 270 VPSRKGYPGHLYSDLAALYERAGMIKDSEGSVTLIPILTMPNDDITHPIPDLTGYITEGQ 329

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           IV++R L  +G YPP++ L S+SRL      +     D   L S L     + +ETR + 
Sbjct: 330 IVVSRDLFSKGVYPPINVLPSLSRLMKDGIGEGYTREDHPDLSSQLFASYSKVQETRALA 389

Query: 391 LIGG 394
            I G
Sbjct: 390 QIIG 393


>gi|307343610|emb|CBJ19222.1| atpD synthase beta subunit [Micromonospora chalcea]
          Length = 298

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E   V++ +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|24940204|emb|CAD43392.1| ATP synthase beta subunit [Hydrolea sp. Chase 3245]
          Length = 485

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 183/371 (49%), Gaps = 33/371 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SA 99
           +V QG+  D+LGQ I +  ++        V    +   + ++ G  V   G     P   
Sbjct: 39  LVVQGR--DSLGQPINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAAISVPVGG 96

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D S    I    P  +  +     F+TGI+V+D+  P
Sbjct: 97  STLGRIFNVLGEPVD---DLGPVDASTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESK 212

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +   +N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNILRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYQTAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|307343658|emb|CBJ19246.1| atpD synthase beta subunit [Micromonospora rifamycinica]
          Length = 308

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 143/259 (55%), Gaps = 8/259 (3%)

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGER 198
           ++  +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER
Sbjct: 4   DRELETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGER 63

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
            RE  + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +
Sbjct: 64  TREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFI 123

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V 
Sbjct: 124 DNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVP 181

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS- 375
            D++ DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E   V++ 
Sbjct: 182 ADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFTVATE 241

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ R+++ +DI  I G
Sbjct: 242 VKRILQRYKDLQDIIAILG 260


>gi|150020193|ref|YP_001305547.1| F0F1 ATP synthase subunit beta [Thermosipho melanesiensis BI429]
 gi|166222423|sp|A6LJR1|ATPB_THEM4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149792714|gb|ABR30162.1| ATP synthase F1, beta subunit [Thermosipho melanesiensis BI429]
          Length = 469

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 164/300 (54%), Gaps = 11/300 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N +G+PIDG + +   D+    + + PP++  Q    +  +TGI+VID+  P   
Sbjct: 90  LGRMFNVIGEPIDGKEDVK--DVEYWPIHRTPPSITEQSTSVEILETGIKVIDLLAPFPK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216
           G +IG F G+G+GK+ L+    R+   +    S+   VGER RE  E   D    + L  
Sbjct: 148 GGKIGFFGGAGVGKTVLVMELIRNIAIEHHGFSMFAGVGERTREGNELYLDMQEAEVLDN 207

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           +V+V    +E P  R    L+A+T+AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 208 TVLVFGQMNEPPGARFRVALSALTMAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 268 MPSAVGYQPTLATDMGELQERI--TSTKKGSITSVQAIYVPADDITDPAPATTFTHLDAT 325

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R  A  G YP VDPL S S++ D      E  ++   +  ++ R+++ +DI  I G
Sbjct: 326 VVLSRRRAALGLYPAVDPLDSTSKMLDPNVVGQEHYEVARGVQEVLQRYKDLQDIIAILG 385


>gi|307343672|emb|CBJ19253.1| atpD synthase beta subunit [Micromonospora sp. GUI2]
 gi|307343704|emb|CBJ19269.1| atpD synthase beta subunit [Micromonospora sp. GUI42]
          Length = 298

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|183206578|gb|ACC54487.1| ATP synthase beta subunit [Campanula rapunculoides]
          Length = 466

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 175/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 23  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGIPLSVPVGGATLGR 82

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 83  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 139

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +I +F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 140 KIXLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 198

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 199 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 258

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 259 SALFGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 316

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 317 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 376

Query: 389 IRLIGG 394
           I  I G
Sbjct: 377 IITILG 382


>gi|313127571|ref|YP_004037841.1| ATP synthase, b subunit [Halogeometricum borinquense DSM 11551]
 gi|312293936|gb|ADQ68396.1| ATP synthase, B subunit [Halogeometricum borinquense DSM 11551]
          Length = 471

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 16/276 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PIDG   +   D    + + + P  +R+  E+  +TG+  +D    L  G
Sbjct: 84  LGRVLDGSGQPIDGGPEIVPDDRHDIVGAAINP-YSREYPEEFIQTGVAAVDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGREVREFIED 208
           Q++ +F+ SG+  + L    AR                   V+   +G    E  EF++D
Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEEAAEEGEEGSEFAVVFGAMGITAEEANEFMDD 202

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
           +     L++SVV +  +D+  + R + P  A+T AEY + + D +VL+IL  +T +  ++
Sbjct: 203 FERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEKDYHVLVILTDMTNYCEAL 262

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI     E+P  RGYP  ++++L +L ER G  E  +G++T +  + + GD+   PI D
Sbjct: 263 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPD 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
               I +G I ++R L  +G  PPV+ L S+SRL D
Sbjct: 323 LTGYITEGQIYVDRDLHSQGVQPPVNVLPSLSRLMD 358


>gi|197132374|gb|ACH47705.1| ATP synthase CF1 beta subunit [Geranium carolinianum]
          Length = 498

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTEITSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + ++ K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +   A+  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGAEHYEIAQRVKETLQR 397

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 398 YKELQDI 404


>gi|1199639|gb|AAC06376.1| A1AO H+ ATPase, subunit B [Methanosarcina mazei Go1]
          Length = 460

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 29/324 (8%)

Query: 86  LVFHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++F     ++  S    GR++   G+P DG      D  L     +M   +++PP     
Sbjct: 69  VIFTGETLKLPASVDLLGRILFGSGEPRDGGPRIVPDQLLDINGAAMNPYARLPP----- 123

Query: 140 RVEKGF-KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVII 192
              K F +TGI  ID    L  GQ++ +F+ SG+  + +    AR      S+    V+ 
Sbjct: 124 ---KDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVF 180

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGD 250
           + +G    E + F+ D+     L+++VV +  +DE  + R + P  A+T AEY +   G 
Sbjct: 181 AAMGITNEEAQYFMSDFEKTGALERAVVFLNLADEPAVERIVTPRMALTAAEYLAYEHGM 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL+IL  IT +A ++R++     E+P  RGYP  ++++L  L ER G  +  KG++T +
Sbjct: 241 HVLVILTDITNYAEALRQMGAARNEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQI 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA--- 367
             + + GD+   PI D    I +G IV+ R L  +G YPP++ L S+SRL +    A   
Sbjct: 301 PILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKT 360

Query: 368 -DEKKLVSSLTHLIHRFEETRDIR 390
            ++ K VS    +   + E RD+R
Sbjct: 361 REDHKAVSD--QMYAGYAEGRDLR 382


>gi|20091272|ref|NP_617347.1| F0F1 ATP synthase subunit beta [Methanosarcina acetivorans C2A]
 gi|19916394|gb|AAM05827.1| H(+)-transporting ATP synthase, subunit beta [Methanosarcina
           acetivorans C2A]
          Length = 484

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           R+ +  G PID        ++    + + PP + R+      F+TGI+VID+  PL  G 
Sbjct: 107 RMFDVFGNPID--HRAPPSNVRWRTIHQAPPPLIRRSTRSEIFETGIKVIDVLVPLERGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ LL+    +    +  +S+   +GER RE  E   D      L  +V
Sbjct: 165 KAGLFGGAGVGKTVLLTEMIHNVVRQQKGVSIFCGIGERCREGEELYRDMKEAGVLPNTV 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  E++   G++P
Sbjct: 225 MVFGQMNEPPGARFRVGHVALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEVSGLMGQMP 284

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL  L ERI  S  + G I ++ +V V  D+  DP A    S L   IV
Sbjct: 285 SRLGYQPTMGTELSELEERI--SNTDAGAIMSIQAVYVPADDFTDPAAVHTFSHLSASIV 342

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP +DPL S S+++      +   +L   +   + ++ E +DI
Sbjct: 343 LSRKRASEGLYPAIDPLQSNSKMSTPGIIGERHYRLAQEIRQTLAQYAELKDI 395


>gi|183206528|gb|ACC54462.1| ATP synthase beta subunit [Legousia pentagonia]
          Length = 497

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 218

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261
               E   G++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I R
Sbjct: 219 GVINEQKFGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFR 276

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  
Sbjct: 277 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLT 334

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   +
Sbjct: 335 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRVVSDEHYKTAQSVKQTL 394

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 395 QRYKELQDIITILG 408


>gi|87301228|ref|ZP_01084069.1| ATP synthase subunit B [Synechococcus sp. WH 5701]
 gi|87284196|gb|EAQ76149.1| ATP synthase subunit B [Synechococcus sp. WH 5701]
          Length = 492

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 164/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIF 155
              GR++N LG+P+D      +G ++  + + +   PP +     + K F+TGI+VID+ 
Sbjct: 100 ATLGRILNVLGEPVDE-----RGPVTTNLTASIHRDPPKLTELETKPKVFETGIKVIDLL 154

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL-- 210
            P   G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++   
Sbjct: 155 APYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKES 214

Query: 211 ----GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                ++L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF 
Sbjct: 215 GVINSEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFV 274

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP
Sbjct: 275 QAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDP 332

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +   +   DE  +   ++   + R
Sbjct: 333 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQR 392

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 393 YKELQDIIAILG 404


>gi|114538|sp|P28250|ATPB_ANGLY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11190|emb|CAA41331.1| adenosinetriphosphatase [Angiopteris lygodiifolia]
          Length = 492

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 105 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 399

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 400 QDIIAILG 407


>gi|86147154|ref|ZP_01065470.1| ATP synthase subunit B [Vibrio sp. MED222]
 gi|218711023|ref|YP_002418644.1| F0F1 ATP synthase subunit beta [Vibrio splendidus LGP32]
 gi|85835038|gb|EAQ53180.1| ATP synthase subunit B [Vibrio sp. MED222]
 gi|218324042|emb|CAV20404.1| ATP synthase beta chain [Vibrio splendidus LGP32]
          Length = 467

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR++N LG  ID    +G  +     + +  P+   Q  E    +TG++VID+  P   G
Sbjct: 86  GRIMNVLGDAIDECGEIGAEEHYA--IHREAPSYEEQSNETALLETGVKVIDLICPFAKG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK 215
            +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    N++
Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIE 203

Query: 216 KS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           K       +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++
Sbjct: 204 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKAGSITSVQAVYVPADDLTDPSPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD  +VLNR++A  G YP +DPL S SR  D      E   +   +   + R++E +DI
Sbjct: 322 HLDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKELKDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|307343624|emb|CBJ19229.1| atpD synthase beta subunit [Micromonospora eburnea]
          Length = 297

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ S +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|307566500|ref|ZP_07628930.1| ATP synthase F1, beta subunit [Prevotella amnii CRIS 21A-A]
 gi|307344782|gb|EFN90189.1| ATP synthase F1, beta subunit [Prevotella amnii CRIS 21A-A]
          Length = 508

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PIDG ++L     SME    I  + P        ++   TGI+VID+  P 
Sbjct: 95  GRMLNVIGQPIDGMEAL-----SMEGAYPIHREAPKFEELSTRKEILSTGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L     
Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVI 209

Query: 211 ---------------------GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS 247
                                 + LKKS   +V    +E P  R    L+ +T+AE F  
Sbjct: 210 KYGEKFHEAMQKGLWDLSLIDKEELKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269

Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            G       +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 270 HGGKDGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V +V V  D+  DP   +  S LD   VL+R +AE G YP VDPLAS SR+ 
Sbjct: 328 TKNGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKIAELGIYPAVDPLASTSRIL 387

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D      E  +    +   +  + E +DI  I G
Sbjct: 388 DPLIVGKEHYECAQRVKETLQHYNELQDIIAILG 421


>gi|307343734|emb|CBJ19284.1| atpD synthase beta subunit [Micromonospora sp. SGA3]
          Length = 302

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E   V++ +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|242806501|ref|XP_002484756.1| ATP synthase F1, beta subunit, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218715381|gb|EED14803.1| ATP synthase F1, beta subunit, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 520

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 153/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P    +    +   TGI+V+D+  P   G
Sbjct: 131 LGRIMNVTGDPIDERGPI-KATKYAPIHTEPPSFAEQSTSAEVLVTGIKVVDLLAPYARG 189

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +     +   
Sbjct: 190 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 248

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 249 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 308

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 309 ALLGRIPSAVGYQPTLAVDMGVMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 366

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D  +  S +  ++  ++  +DI
Sbjct: 367 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGEDHYQTASRVQQMLQEYKSLQDI 426

Query: 390 RLIGG 394
             I G
Sbjct: 427 IAILG 431


>gi|197334159|ref|YP_002157351.1| ATP synthase F1, beta subunit [Vibrio fischeri MJ11]
 gi|226740689|sp|B5FCZ1|ATPB_VIBFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|197315649|gb|ACH65096.1| ATP synthase F1, beta subunit [Vibrio fischeri MJ11]
          Length = 467

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 23/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N LG  ID       GD+  E    I  + P    +    +  +TG++VID+  P 
Sbjct: 86  GRIMNVLGDAIDE-----CGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPF 140

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGD 212
             G +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    
Sbjct: 141 AKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVV 200

Query: 213 NLKKS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
           N++K       +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  
Sbjct: 201 NIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGT 260

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V V  D+  DP   +
Sbjct: 261 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPAT 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD  +VLNR++A  G YP +DPL S SR  D      E   V+  +   + R++E 
Sbjct: 319 TFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQSTLQRYKEL 378

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 379 KDIIAILG 386


>gi|148240336|ref|YP_001225723.1| F0F1 ATP synthase subunit beta [Synechococcus sp. WH 7803]
 gi|166222422|sp|A5GNB1|ATPB_SYNPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|147848875|emb|CAK24426.1| ATP synthase beta chain [Synechococcus sp. WH 7803]
          Length = 487

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPV-NASATAPIHRSAPKLTELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            ++L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 AEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +   A   +E  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGEEHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|94986145|ref|YP_605509.1| V-type ATP synthase subunit B [Deinococcus geothermalis DSM 11300]
 gi|123256976|sp|Q1IWP4|VATB_DEIGD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|94556426|gb|ABF46340.1| V-type H+-ATPase subunit B [Deinococcus geothermalis DSM 11300]
          Length = 470

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 149/276 (53%), Gaps = 11/276 (3%)

Query: 94  RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           R+  S    GR  + LG+PIDG    + +  L++      P A  R + E+  +TGI  I
Sbjct: 82  RLGVSREMIGRRFDGLGRPIDGLPPVVAEKRLNINGEPMNPAA--RAKPEEFIQTGISTI 139

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206
           D+ T L  GQ++ +F+GSG+  + L +  AR            V+ + +G   REV  F 
Sbjct: 140 DVNTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 199

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           +++     L +SV+ +  +D+  + R + P  A+T AEY +   G +VL+IL  +T +  
Sbjct: 200 QEFERTGALARSVLFLNRADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDMTNYCE 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI     E+P  RG+P  ++++L  L ER G  + + G++T +  + +  D+   PI
Sbjct: 260 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVQGKPGSVTQIPILSMPDDDITHPI 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G IV++R L  +G +PP++PL S+SRL
Sbjct: 320 PDLTGYITEGQIVVDRGLNAKGIFPPINPLPSLSRL 355


>gi|325107763|ref|YP_004268831.1| ATP synthase F1 subcomplex subunit beta [Planctomyces brasiliensis
           DSM 5305]
 gi|324968031|gb|ADY58809.1| ATP synthase F1 subcomplex beta subunit [Planctomyces brasiliensis
           DSM 5305]
          Length = 481

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 167/309 (54%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV N LG  IDG     +GD+  E    I  + P   +     + F+TGI+V+D+ TP 
Sbjct: 96  GRVFNVLGDTIDG-----RGDVQTEERWPIHRQAPALDDLSSKTELFETGIKVVDLLTPF 150

Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLG 211
             G + G+F G+G+GK+ +L+ + AR  S      + + VGER RE      E  E  +G
Sbjct: 151 VRGGKAGLFGGAGLGKTVILTELIARIASAHGGYSVFAGVGERTREGNDLWLEMQETKIG 210

Query: 212 DN----LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
                 ++++ +V    +E P  R    L+A+T+AE+F  + G + LL +D+I RF+ + 
Sbjct: 211 QTDRSVIEQTCMVFGQMNEPPGSRLRVALSALTMAEWFRDTTGTDTLLFVDNIFRFSQAG 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +EL  L ERI  +  ++G IT+V +V V  D+  DP   
Sbjct: 271 SEVSALLGRMPSAVGYQPTLATELGALQERI--TSTKRGAITSVQAVYVPADDPTDPAPA 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  S LD  I L R ++E+G YP +DPLAS SR+ D  +  +    V+  +  ++ R+ E
Sbjct: 329 TAFSHLDAFIYLERKISEKGIYPAIDPLASSSRILDPQYVGERHYTVARRVQQILQRYRE 388

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 389 LQDIIAILG 397


>gi|183206624|gb|ACC54510.1| ATP synthase beta subunit [Campanula exigua]
          Length = 477

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|189502302|ref|YP_001958019.1| F0F1 ATP synthase subunit beta [Candidatus Amoebophilus asiaticus
           5a2]
 gi|226739972|sp|B3EST8|ATPB_AMOA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189497743|gb|ACE06290.1| hypothetical protein Aasi_0925 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 502

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 40/329 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG     K    + I    P   +     +   TGI+VID+  P   G 
Sbjct: 89  GRLFNVIGEAIDGLPQ-PKTQQKLPIHRPAPKFKDISTATEVLYTGIKVIDLLAPYVKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE IE  +   G+
Sbjct: 148 KIGLFGGAGVGKTVLIMELIDNIAKSYAGLSVFAGVGERTREGNDLLREMIESGVINYGE 207

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246
             +KS+                     +V    +ESP  R    LT +T AEYF      
Sbjct: 208 EFRKSMEAGGWDLSKVDREALNKSHATLVFGQMNESPGARARVALTGLTAAEYFRDGNGQ 267

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG +VLL +D+I RF  +  E++T  G +P A GY  ++ +E+  + ERI  +  + G+
Sbjct: 268 EKGKDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLATEMGAMQERI--TSVKNGS 325

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAW 365
           IT+V +V V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ + +  
Sbjct: 326 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLESSSRILNPEVL 385

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
                     + +++ R++E +DI  I G
Sbjct: 386 GEIHYNTAQRVKNILQRYKELQDIIAILG 414


>gi|224179490|ref|YP_002601016.1| CF1 beta subunit of ATP synthase [Monomastix sp. OKE-1]
 gi|217314533|gb|ACK36876.1| CF1 beta subunit of ATP synthase [Monomastix sp. OKE-1]
          Length = 482

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 20/309 (6%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D  G  S GK   ++ I    P  ++       F+TGI+V+D+  P  
Sbjct: 95  LGRIFNVLGEPVDELGPVSTGKVK-TLPIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 154 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 213

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 TDKMSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W    D  K   S+   + R++E
Sbjct: 332 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGDDHYKAAQSVKRTLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|183206632|gb|ACC54514.1| ATP synthase beta subunit [Githopsis pulchella]
          Length = 485

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  ++  I    P  ++       F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPID---NLGPVDTRITAPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 206

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 207 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 266

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 267 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 324

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +  S D  +   S+   + R
Sbjct: 325 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDDHYETAQSVKQTLQR 384

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 385 YKELQDIITILG 396


>gi|307343678|emb|CBJ19256.1| atpD synthase beta subunit [Micromonospora sp. GUI12]
 gi|307343696|emb|CBJ19265.1| atpD synthase beta subunit [Micromonospora sp. GUI34]
          Length = 301

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E   V++ +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|209696443|ref|YP_002264374.1| F0F1 ATP synthase subunit beta [Aliivibrio salmonicida LFI1238]
 gi|226739970|sp|B6EHG4|ATPB_ALISL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|208010397|emb|CAQ80743.1| ATP synthase beta chain [Aliivibrio salmonicida LFI1238]
          Length = 467

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  +    I    P    +    +  +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGEIG-AEEHYSIHRAAPSYEEQANSTELLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK- 215
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F   +++    N++ 
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIEH 204

Query: 216 ----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +    G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTRSGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   +  ++   + R++E +DI 
Sbjct: 323 LDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARNVQSTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|183206538|gb|ACC54467.1| ATP synthase beta subunit [Pseudonemacladus oppositifolius]
          Length = 498

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTAPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVIKEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|311696887|gb|ADP99760.1| F0F1 ATP synthase subunit alpha [marine bacterium HP15]
          Length = 505

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 170/343 (49%), Gaps = 13/343 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V+ +  D + +  +G  + I+ G+ V+   + F +       GR+++A G P DG+ S
Sbjct: 57  GVVLDLEPDRLGVILLGPSDRITAGEDVWRTHKVFSVPVGNGLLGRILDATGGPRDGNGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           +        + +  P  ++R  V +   TGI+VID   P+  GQR  +      GK+   
Sbjct: 117 VAS-TAERPVEASAPGILSRAPVNRPLATGIKVIDGAVPIGLGQRELIIGDRQTGKTSIA 175

Query: 176 --TLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRK 232
             T+L+  ARSD     I   +G+RG  V   IE       L  +VVV A  +++P L  
Sbjct: 176 IDTILNQ-ARSDVVS--IYCAIGQRGDAVARVIETLRKSGQLANTVVVAAGDEDAPGLAY 232

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A+T+AEYF+ +G +VL++ D +T  A S RE++      P    +P  +F    R
Sbjct: 233 VAPYAAMTMAEYFADQGRDVLVVFDDLTHHARSYRELSLLLRRPPGREAFPGDIFYVHAR 292

Query: 293 LLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER G    E   G+ITA+  V    +N +  I  ++ SI DG I L+  L  + ++P 
Sbjct: 293 LLERAGQFTPEAGGGSITALPVVETQAENLSAYIPTNLISITDGQIYLSPRLVRKNQFPA 352

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           VD   SVSR+  KA     +++  +L   + +FEE  D    G
Sbjct: 353 VDIGLSVSRVGGKAQHRAFREVAGNLRVTLSQFEELEDFARFG 395


>gi|307343662|emb|CBJ19248.1| atpD synthase beta subunit [Micromonospora saelicesensis]
          Length = 298

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADH 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGNEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|15897485|ref|NP_342090.1| V-type ATP synthase subunit B [Sulfolobus solfataricus P2]
 gi|284174802|ref|ZP_06388771.1| V-type ATP synthase subunit B [Sulfolobus solfataricus 98/2]
 gi|12585503|sp|Q9UWW8|VATB_SULSO RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|6015908|emb|CAB57735.1| atpase-beta chain (membrane-associated) [Sulfolobus solfataricus
           P2]
 gi|13813730|gb|AAK40880.1| ATP synthase subunit B (atpB) [Sulfolobus solfataricus P2]
 gi|261602245|gb|ACX91848.1| ATP synthase, B subunit [Sulfolobus solfataricus 98/2]
          Length = 463

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 161/307 (52%), Gaps = 19/307 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+ N LG  +D    + KG+      S + PA  R+  E+  +TGI  ID    
Sbjct: 84  SEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAA-REYPEEFIQTGISAIDGLNA 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208
           L  GQ++ +F+GSG+  + L +  A+            V+ + +G R  +    R+F E+
Sbjct: 143 LLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFAAIGARYDDALFFRKFFEE 202

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
               N  +  ++V+ ++E P+++ + P TA+T+AEY + + D +VL IL  +T +  ++R
Sbjct: 203 TGAIN--RVAMIVSLANEPPVMKTLTPKTALTLAEYLAFEQDMHVLAILIDMTNYCEALR 260

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+    E+P   GYP  ++++L  + ER G    +KG+IT +  + +  D+   PI D 
Sbjct: 261 EISAAREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMPILTMPNDDITHPIPDL 320

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRF 383
              I +G IVL+R+L  +G YPP++ L S+SRLA     +  + D+ K VS+   L   +
Sbjct: 321 TGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSN--QLFASY 378

Query: 384 EETRDIR 390
               D R
Sbjct: 379 ARAVDTR 385


>gi|183206524|gb|ACC54460.1| ATP synthase beta subunit [Legousia speculum-veneris]
          Length = 498

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLAIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEEKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRVVSDEHYKTAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|307343654|emb|CBJ19244.1| atpD synthase beta subunit [Micromonospora peucetia]
          Length = 291

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|307343634|emb|CBJ19234.1| atpD synthase beta subunit [Micromonospora fulviviridis]
          Length = 302

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ S +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|164566149|gb|ABY61217.1| ATP synthase beta subunit [Danaea wendlandii]
          Length = 394

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|84393416|ref|ZP_00992173.1| ATP synthase subunit B [Vibrio splendidus 12B01]
 gi|84375932|gb|EAP92822.1| ATP synthase subunit B [Vibrio splendidus 12B01]
          Length = 467

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 15/304 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N LG  ID    +G  +    I  + P    +       +TG++VID+  P   G 
Sbjct: 86  GRIMNVLGDAIDECGEIG-AEEHYAIHREAPSYEEQSNETSLLETGVKVIDLICPFAKGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211
           +IG+F G+G+GK+  +     +       +S+   VGER RE  +F        + +   
Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIEN 204

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
               K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKAGSITSVQAVYVPADDLTDPSPATTFAH 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD  +VLNR++A  G YP +DPL S SR  D      E   +   +   + R++E +DI 
Sbjct: 323 LDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKELKDII 382

Query: 391 LIGG 394
            I G
Sbjct: 383 AILG 386


>gi|38422324|emb|CAE45326.1| unnamed protein product [Magnetospirillum gryphiswaldense]
 gi|144898923|emb|CAM75787.1| F1-ATP synthase, beta subunit [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 474

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G PID    +G    +  I ++ P  +++    +   TGI+VID+  P   G
Sbjct: 87  LGRILNVIGDPIDERGPVGNTQ-TRPIHAEAPAFIDQSTDAEILVTGIKVIDLLAPYLKG 145

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   + +   +   
Sbjct: 146 GKIGLFGGAGVGKTVTIMELINNVAKAHGGVSVFAG-VGERTREGNDLYHEMMESGVIKI 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  +  E+
Sbjct: 205 DGPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAASF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE   +P VDPL S SR  D     +E   V+  +  ++  ++  +D
Sbjct: 323 AHLDATTVLSRSIAEMAIFPAVDPLDSTSRALDPRIVGEEHYGVAREVQRILQTYKSLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|260174635|ref|ZP_05761047.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D2]
 gi|315922899|ref|ZP_07919139.1| ATP synthase subunit beta [Bacteroides sp. D2]
 gi|313696774|gb|EFS33609.1| ATP synthase subunit beta [Bacteroides sp. D2]
          Length = 506

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 162/329 (49%), Gaps = 50/329 (15%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR++N +G  IDG   L  KG  S  I  + P   +   V++   TGI+VID+  P   G
Sbjct: 93  GRLMNVVGDSIDGMKGLDRKGAYS--IHREPPKFEDLTTVQEVLFTGIKVIDLLEPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE----- 207
            +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE     
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIR 208

Query: 208 -------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS 246
                              DY  + L+KS V  +    +E P  R    L+ +T+AE F 
Sbjct: 209 YGEAFKEGMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFR 266

Query: 247 SKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
             G      ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  + 
Sbjct: 267 DAGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TS 324

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+ 
Sbjct: 325 TRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRIL 384

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           D      E   +   +  ++ R +E +DI
Sbjct: 385 DPHIVGQEHYDIAQQVKQILQRNKELQDI 413


>gi|229915483|gb|ACQ90827.1| CF1 beta subunit of ATP synthase [Pedinomonas minor]
          Length = 480

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +G  D  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 97  GRIFNVLGEPVDNLGPVGAKD-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 155

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------ED 208
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E 
Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEG 214

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 215 NLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 272

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 273 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 330

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E 
Sbjct: 331 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDEHYQTAQRVKQTLQRYKEL 390

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 391 QDIIAILG 398


>gi|327538812|gb|EGF25459.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica WH47]
          Length = 484

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 14/318 (4%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +S G  V   GR  ++       GRV++  G  +D  +SL    +    + + PP +NR 
Sbjct: 91  LSRGTPVRSCGRSMQVPVGKPLLGRVLDVFGNTLDDGESLKS--VEHRSIHQTPPTINR- 147

Query: 140 RVEKG--FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           R+ K   F TGI+ ID+ +PL  G + G+F G+G+GK+ L++    +       ISL   
Sbjct: 148 RIAKSEVFTTGIKAIDLLSPLERGGKAGLFGGAGVGKTVLITELIHNIVGGHDGISLFCG 207

Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           +GER RE  E   +     ++  +V+V    +E P  R      A+T+AE F      +V
Sbjct: 208 IGERCREAEELYREMGAAGVRDNTVMVFGQMNEPPGARFRVGHAALTMAESFRDDAKQDV 267

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++D+I RF  +  E++   G+LP   GY  S+ S+L  L ERI         IT+V +
Sbjct: 268 LLLIDNIFRFVQAGMEVSGLLGQLPSRVGYQPSLASDLAELEERI--CTTSDAAITSVQA 325

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP A    + L   +VL+R  A EG YP +DPL S S +       D   K
Sbjct: 326 VYVPADDFTDPSAVHTFAHLSATVVLSRKRASEGLYPAIDPLKSTSEMMLPGVVGDRHYK 385

Query: 372 LVSSLTHLIHRFEETRDI 389
             S++   +  +EE +DI
Sbjct: 386 TASNVRQTLAGYEELKDI 403


>gi|225419877|ref|ZP_03762180.1| hypothetical protein CLOSTASPAR_06218 [Clostridium asparagiforme
           DSM 15981]
 gi|225041501|gb|EEG51747.1| hypothetical protein CLOSTASPAR_06218 [Clostridium asparagiforme
           DSM 15981]
          Length = 457

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 161/312 (51%), Gaps = 18/312 (5%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S     R+ + LG+PIDG  D L +  + +  +   P A  R   ++  +TG+  ID   
Sbjct: 82  SEDMLSRIFDGLGRPIDGGPDILPEKRMDINGLPMNPAA--RNYPQEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209
            L  GQ++ +F+ SG+  + L +  AR       SD F  V+ + +G    E   F+E +
Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTSDPF-AVVFAAMGITFEEANFFMESF 198

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIR 267
                + +SV+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A ++R
Sbjct: 199 KETGAIDRSVMFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADALR 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   PI D 
Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILSMPEDDKTHPIPDL 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382
              I +G I+L+R L  +G  PP+D L S+SRL DK        AD   +++ L     R
Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHANVMNQLFAAYAR 378

Query: 383 FEETRDIRLIGG 394
            ++ +++ +I G
Sbjct: 379 GKDAKELMVILG 390


>gi|184127873|gb|ACC67836.1| ATP synthase beta chain [Angiopteris smithii]
          Length = 402

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 15  LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 72

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 73  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 193 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 310 QDIIAILG 317


>gi|73670558|ref|YP_306573.1| F0F1 ATP synthase subunit beta [Methanosarcina barkeri str. Fusaro]
 gi|72397720|gb|AAZ71993.1| H(+)-transporting ATP synthase, subunit beta [Methanosarcina
           barkeri str. Fusaro]
          Length = 474

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 137/263 (52%), Gaps = 8/263 (3%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           PP M R    + F+TGI+ ID+  PL  G + G+F G+G+GK+ LL+    +       +
Sbjct: 125 PPLMRRSTTSEIFETGIKAIDVLVPLERGGKAGLFGGAGVGKTVLLTEMIHNVVKQHQGV 184

Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SS 247
           S+   +GER RE  E   D      L  +V+V    +E P  R     TA+T+AEYF   
Sbjct: 185 SIFCGIGERCREGEELYRDMKDAGVLPHTVMVFGQMNEPPGARFRVGHTALTMAEYFRDD 244

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +  +VLL++D+I RF  +  E++   G++P   GY  ++ +EL  L ERI  S  + G I
Sbjct: 245 ERRDVLLLIDNIFRFIQAGSEVSGLMGQMPSRLGYQPTLGTELSELEERI--STTDAGAI 302

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
            ++ +V V  D+  DP A    S L   IVL+R  A EG YP +DPL S S++A      
Sbjct: 303 MSIQAVYVPADDFTDPSAVHTFSHLSASIVLSRKRASEGLYPAIDPLQSNSKMATPGIIG 362

Query: 368 DEK-KLVSSLTHLIHRFEETRDI 389
           +    L   +   + ++ E +DI
Sbjct: 363 ERHYHLAQKIRQTLAQYSELKDI 385


>gi|330850821|ref|YP_004376571.1| ATP synthase CF1 beta chain [Fistulifera sp. JPCC DA0580]
 gi|328835641|dbj|BAK18937.1| ATP synthase CF1 beta chain [Fistulifera sp. JPCC DA0580]
          Length = 475

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N +G+P+D  G+ S    D ++ I    P     +     F+TGI+V+D+  P  
Sbjct: 91  LGRIFNVIGEPVDEQGEVSF---DETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYR 147

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+     + 
Sbjct: 148 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 206

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 207 NSKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 266

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 267 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 324

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R+LA +G YP VDPL S S +      ++E  ++  S+   + R++E
Sbjct: 325 TTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPDIVSEEHYRIAESVKETLQRYKE 384

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 385 LQDIIAILG 393


>gi|330792833|ref|XP_003284491.1| hypothetical protein DICPUDRAFT_52984 [Dictyostelium purpureum]
 gi|325085521|gb|EGC38926.1| hypothetical protein DICPUDRAFT_52984 [Dictyostelium purpureum]
          Length = 652

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 169/340 (49%), Gaps = 18/340 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    + I + +  G  V + G   + P      GR++N +G+PIDG   +   +    
Sbjct: 157 IVRCVALDITDGLGRGAKVLNSGAPLMVPVGNVTLGRIMNVIGEPIDGCGPINATE--RR 214

Query: 128 IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + + PP  +         +TGI+VID+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 215 PIWRSPPHFSELAPSASILETGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIA 274

Query: 187 FDK---VIISLVGERGREVREFIEDYLGDNLKKS-------VVVVATSDESPILRKMAPL 236
                  + + VGER RE  +   + +   + K+        +V    +E P  R    L
Sbjct: 275 KAHGGFSVFAGVGERTREGNDLYHEMVSAGVIKTDGPGSKVALVFGQMNEPPGARARVTL 334

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF    G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + E
Sbjct: 335 TGLTVAEYFRDVDGQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGSMQE 394

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  ++K  G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL 
Sbjct: 395 RIATTKK--GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPCVDPLD 452

Query: 356 SVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           S S + D     A+   + + +  ++  ++  +DI  I G
Sbjct: 453 STSLMMDPNIIGAEHYTVATDVQKILQEYKSLQDIIAILG 492


>gi|289523020|ref|ZP_06439874.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503563|gb|EFD24727.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 472

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 18/368 (4%)

Query: 45  LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR--FRISPSACWC 102
           +G+ V  +    ++ GQ+++I  D+  I   G    ++  + V    R   +I       
Sbjct: 35  IGEIVKIESNFGEDYGQILQIVDDLCVIQVFGETMGLAPNNTVVWLERDVVKIPLGIALQ 94

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N    PIDG+  +   +    I         R+   +  +TGI  ID+   L  GQ
Sbjct: 95  GRILNGRAMPIDGEGPISCIEKWAPIQGNAINPWRRKSPHEFIETGISTIDLMNTLVKGQ 154

Query: 163 RIGVFAGSGIGKSTLLSM---FARSDCFDK------VIISLVGERGREVREFIEDYL-GD 212
           ++ +F GSG+    L +    +AR+           V+ + +G   RE   F E +    
Sbjct: 155 KLPIFTGSGLPADKLAAQIVKYARTPATSADSSPFMVVFAALGITQREASYFREAFRESG 214

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271
           ++ + V     + +  I R + P  A+T+AEYF+  KG +VL++L  +  +  ++REI++
Sbjct: 215 SIYRGVFFFNLAGDPSIERILTPRMALTVAEYFAFEKGYDVLVVLTDMLHYCEALREISS 274

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              E+P  RG+P+ ++S+L  + ER G     KG+IT +  V +  D+   P+ D    I
Sbjct: 275 AREEIPGRRGFPSYMYSDLASIYERAGCISGIKGSITQIPIVTMPDDDLTHPVPDLTGYI 334

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEET 386
            +G IV++R L  +G YPP+D L+S+SRL +K         + + L + L     RF++ 
Sbjct: 335 TEGQIVMDRELHGKGIYPPIDVLSSLSRLMNKGIGEGSTVPEHRSLSNQLYAAYGRFKDL 394

Query: 387 RDIRLIGG 394
             ++ I G
Sbjct: 395 VRLKTIIG 402


>gi|290559098|gb|EFD92467.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Candidatus Parvarchaeum acidophilus ARMAN-5]
 gi|290559266|gb|EFD92603.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 459

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 174/351 (49%), Gaps = 18/351 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+  N ++  +   G    ++  D  ++F    F++  S    GRV + LG+P DG  
Sbjct: 43  GQVLATNEEVTIVQVFGETTGMNTKDTKVLFKGTTFKMPVSMDMIGRVFDGLGRPRDGGI 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D   +I         R+   +  +TGI  ID    L  GQ++ +F+GSG+  + L
Sbjct: 103 PVFSED-KRDINGNPINPYAREEPSEFVQTGISSIDCMNTLVRGQKLPIFSGSGLSHNKL 161

Query: 178 LS-------MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +       + A  + F  V+   +G    +   FI ++     L+KSV+ +  + +  +
Sbjct: 162 AAQIVKQAKILAEKEGF-YVVFGGIGINSEDANFFINEFQNSGALEKSVIFLNLAADPSM 220

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P   +T AEY +  KG +V+++L  +T +A ++REI+    E+P  RGYP  +++
Sbjct: 221 ERVILPRLVLTTAEYLAYEKGAHVMVVLTDMTNYAEALREISAARDEVPGRRGYPGYMYT 280

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  + +KG++T +  + +  D+   PI D    I +G IV++RSL + G Y
Sbjct: 281 DLSSIFERAGKVKGKKGSVTQLPILTMPSDDITHPIPDLTGYITEGQIVMSRSLDKSGIY 340

Query: 349 PPVDPLASVSRLADK-----AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           P VD L S+SRL ++     +   D K +   +     R +E R +  I G
Sbjct: 341 PEVDVLLSLSRLMNQGVGKGSTREDHKNVSDQMYAAYARGKEIRSLTEIVG 391


>gi|228017198|gb|ACP52018.1| ATP synthase CF1 beta subunit [Pinus leiophylla var. chihuahuana]
          Length = 492

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDAGITSAIHRPAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|307343714|emb|CBJ19274.1| atpD synthase beta subunit [Micromonospora sp. CR21]
          Length = 302

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|156530165|gb|ABU75179.1| AtpB [Pierreodendron africanum]
          Length = 498

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +    +    +TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTILSILETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNERDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|2104727|gb|AAB64417.1| V-ATPase B subunit [Desulfurococcus sp. SY]
          Length = 465

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 22/359 (6%)

Query: 19  LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73
           +++ G   S+++ +Y  +  +   + V  G+ V +         GQV+  R NL IV + 
Sbjct: 1   MLMPGMEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVF 60

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130
                 ++    + F     ++  S    GR+ N +GKPIDG   +    + D+    ++
Sbjct: 61  EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184
            V  A  R  ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR       
Sbjct: 121 PVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176

Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
            + F  V+ + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+A
Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235

Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EY +   D  VL+IL  +T +A ++REI+    E+P  RGYP  ++++L  + ER G   
Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERGGRVR 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +KG+IT +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354


>gi|307343736|emb|CBJ19285.1| atpD synthase beta subunit [Micromonospora sp. SGA5]
          Length = 315

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 7   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 66

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 67  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 126

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 127 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 184

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 185 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 244

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 245 ILQRYKDLQDIIAILG 260


>gi|254797107|ref|YP_003081945.1| ATP synthase F1, beta subunit [Neorickettsia risticii str.
           Illinois]
 gi|254590344|gb|ACT69706.1| ATP synthase F1, beta subunit [Neorickettsia risticii str.
           Illinois]
          Length = 474

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 161/306 (52%), Gaps = 17/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N +G+ IDG   + + +    I ++ PP  + Q       +TGI+VID+  P   G
Sbjct: 88  GRIFNVVGEIIDGGGPVPEPNKVSSIYAE-PPKFDMQSTSSEILETGIKVIDLLAPYSKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL---- 214
            ++G+F G+G+GK+ L+       +  +    + + VGER RE  +   + +   +    
Sbjct: 147 GKVGLFGGAGVGKTVLIMELINNIAKAYGGFSVFAGVGERTREGNDLYNEMVESGVINKE 206

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
                K V+V    +E P  R    ++A+T+AEYF  K G +VL  +D+I RF  +  E+
Sbjct: 207 HPEKSKVVLVYGQMNEPPGARAKVAMSALTMAEYFRDKEGQDVLFFVDNIFRFTQAGAEL 266

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +T  G +P A GY  ++ +++ RL ERI  +  + G+IT+V ++ V  D+  DP   +  
Sbjct: 267 STLLGRIPSAVGYQPTLATDMGRLQERI--TSTKHGSITSVQAIYVPADDITDPAPATSF 324

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VD LAS ++ L+ +    +  ++   +  ++  ++  +D
Sbjct: 325 AHLDSTTVLSRQVAEAGIYPAVDALASSAQILSPEVLGQEHYEVAQKVKGILQSYKSLQD 384

Query: 389 IRLIGG 394
           I  I G
Sbjct: 385 IIAILG 390


>gi|183206610|gb|ACC54503.1| ATP synthase beta subunit [Craterocapsa tarsodes]
          Length = 476

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 198

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +  S +  +   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSNEHYETAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|125974753|ref|YP_001038663.1| V-type ATP synthase subunit B [Clostridium thermocellum ATCC 27405]
 gi|256005236|ref|ZP_05430203.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum DSM
           2360]
 gi|281418778|ref|ZP_06249797.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum JW20]
 gi|171769991|sp|A3DHP1|VATB_CLOTH RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|125714978|gb|ABN53470.1| Sodium-transporting two-sector ATPase [Clostridium thermocellum
           ATCC 27405]
 gi|255990787|gb|EEU00902.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum DSM
           2360]
 gi|281407862|gb|EFB38121.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum JW20]
 gi|316941887|gb|ADU75921.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium thermocellum DSM 1313]
          Length = 460

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 26/316 (8%)

Query: 98  SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           S    GRV + +GKP+DG      D  L    L M   ++  P+       +  +TGI  
Sbjct: 82  SMDMLGRVFSGMGKPLDGGPNIIPDKRLDINGLPMNPAARNYPS-------EFIQTGISA 134

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205
           ID    L  GQ++ +F+GSG+  + L +  AR      +D    V+ + VG    E   F
Sbjct: 135 IDGLNTLVRGQKLPIFSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAVGITFEEADYF 194

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263
           I D+     + ++V+ +  +++  I R   P  A+T AEY +  KG +VL+I+  IT +A
Sbjct: 195 ISDFKRTGAIDRTVLFINLANDPAIERISTPRMALTAAEYLAFDKGMHVLVIITDITNYA 254

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++RE++    E+P  RGYP  ++++L  + ER G     +G+IT +  + +  D+   P
Sbjct: 255 EALREVSAARKEVPGRRGYPGYLYTDLATIYERAGRRIDSEGSITLIPILTMPEDDKTHP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTH 378
           I D    I +G I+L+R L  +G  PP+D L S+SRL DK         D    ++ L  
Sbjct: 315 IPDLTGYITEGQIILSRELHRKGVTPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFA 374

Query: 379 LIHRFEETRDIRLIGG 394
              R +E +++ +I G
Sbjct: 375 AYARGKEAKELAVILG 390


>gi|119350519|gb|ABL63210.1| AtpB [Neochloris aquatica]
          Length = 393

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ +D    +   + ++ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEAVDNMGPVQNME-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +E  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           L D+  K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E
Sbjct: 158 LSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   EK  +   S+   + R++E 
Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEKHYECAQSVKRTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|108773232|ref|YP_635746.1| CF1 beta subunit of ATP synthase [Chara vulgaris]
 gi|118573519|sp|Q1ACK1|ATPB_CHAVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|77157888|gb|ABA61929.1| CF1 beta subunit of ATP synthase [Chara vulgaris]
          Length = 493

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|19033061|gb|AAL83515.1|AF408787_1 ATP synthase beta subunit [Tolypella prolifera]
          Length = 402

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 QDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|307343690|emb|CBJ19262.1| atpD synthase beta subunit [Micromonospora sp. GUI23]
          Length = 298

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGPEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|307343622|emb|CBJ19228.1| atpD synthase beta subunit [Micromonospora coxensis]
          Length = 302

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ S +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|307343616|emb|CBJ19225.1| atpD synthase beta subunit [Micromonospora citrea]
          Length = 298

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|170293975|gb|ACB13081.1| ATP synthase beta subunit [Ulva intestinalis]
          Length = 366

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 158/307 (51%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+P+DG +     + S+ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVVGQPVDGLEDAAHEN-SLPIHRSAPAFVDLDTQLSIFETGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          D
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIQED 139

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 140 NISESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 199

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 200 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 257

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV--SSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E +
Sbjct: 258 AHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYTCAQNVKETLQRYKELQ 316

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 317 DIIAILG 323


>gi|154483904|ref|ZP_02026352.1| hypothetical protein EUBVEN_01609 [Eubacterium ventriosum ATCC
           27560]
 gi|149735395|gb|EDM51281.1| hypothetical protein EUBVEN_01609 [Eubacterium ventriosum ATCC
           27560]
          Length = 459

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 176/330 (53%), Gaps = 24/330 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +F ++ G     LG++I I  D   I      E +SL +    L  H     +SP     
Sbjct: 31  EFSINDGAEK-RLGRIIEIYEDKAIIQVFEGSEGMSLTNTHTKLTGHPMEVALSPE--IL 87

Query: 103 GRVINALGKPIDGDDSL--GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N +GKPIDG   +   K D++ + ++ V    +R+      +TGI  ID  T L  
Sbjct: 88  GRTFNGIGKPIDGLAPIVGEKRDVNGKPLNPV----SREYPRNYIRTGISAIDGLTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-----DCFDK--VIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+G+G+    L +          D  +K  V+ + +G +  +V +F +    ++
Sbjct: 144 GQKLPIFSGNGLPHDQLAAQLVNQSSLGDDTDEKFAVVFAAMGVK-NDVADFFKRSFEES 202

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             L+ +V+ +  +++  + R + P  A+T+AEY + + D ++L+IL  +T +A ++RE++
Sbjct: 203 GALEHTVMFLNMANDPVVERLITPKVALTVAEYLAYEKDMHILVILTDMTTYAEAMREVS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
           ++ GE+P  +GYP  ++SEL  + ER G  +  KG++T +  + +  D+   PI D    
Sbjct: 263 SSKGEIPSRKGYPGYLYSELATIYERAGIVKGSKGSVTQIPILTMPNDDITHPIPDLTGY 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           I +G I L+RSL  +G YPP++ L S+SRL
Sbjct: 323 ITEGQITLDRSLNGQGIYPPINVLPSLSRL 352


>gi|119368012|dbj|BAF40501.1| ATP synthase beta subunit [Adenia sp. Tokuoka 261]
          Length = 488

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G D++       +       GR
Sbjct: 42  KGRDTIGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMDVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID    LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLETKFSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++
Sbjct: 219 ITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +   A+  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGAEHYQTAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|84999258|ref|XP_954350.1| ATP synthase beta chain, mitochondrial precursor [Theileria
           annulata]
 gi|65305348|emb|CAI73673.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Theileria annulata]
          Length = 583

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 168/345 (48%), Gaps = 29/345 (8%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E +  G  V   G    I       GR++N  G  IDG   + K +  + I    P
Sbjct: 157 MGATEGLMRGQEVLDTGSPITIPVGTATLGRIMNVTGDAIDGFGPI-KSEHQLPIHRPAP 215

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---- 189
               ++  E    TGI+V+D+  P   G +IG+F G+G+GK T+L M   ++  +K    
Sbjct: 216 TFEEQKSDEALLITGIKVVDLLAPYAKGGKIGLFGGAGVGK-TVLIMELINNVANKHGGY 274

Query: 190 VIISLVGERGREVREFIEDYL--------------GDNL----KKSVVVVATSDESPILR 231
            I + VGER RE  E   + +              GD       K+ +V    +E P  R
Sbjct: 275 SIFAGVGERTREGNELYHEMMSTGVIKRALKPNGKGDEADFTGSKASLVYGQMNEPPGAR 334

Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L
Sbjct: 335 ARVALTGLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDL 394

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP 
Sbjct: 395 GSLQERI--TTTKKGSITSVQAIYVPADDITDPAPATTFTHLDATTVLSRQIAELGIYPA 452

Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VDPL S SR+       + +  V+ ++  ++  ++  +DI  I G
Sbjct: 453 VDPLDSTSRMLSSHIVGERQYNVARAVQKILQDYKSLQDIIAILG 497


>gi|11467696|ref|NP_050748.1| ATP synthase CF1 beta subunit [Guillardia theta]
 gi|5915725|sp|O78491|ATPB_GUITH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|3603021|gb|AAC35682.1| ATP synthase CF1 subunit b [Guillardia theta]
          Length = 475

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D  GD +L   D ++ I    P     +     F+TGI+V+D+  P
Sbjct: 88  ATLGRIFNVLGQPVDNMGDVAL---DQTLPIHRGSPAFTQLETKPSIFETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 145 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 203

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E  LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 204 VINESNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 261

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  D
Sbjct: 262 VQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTTEGSITSIQAVYVPADDLTD 319

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  S LD   VL+R+LA +G YP VDPL S S +        E      ++   + 
Sbjct: 320 PAPATTFSHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQINIVGQEHYSCAQNVKETLQ 379

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 380 RYKELQDIIAILG 392


>gi|307343640|emb|CBJ19237.1| atpD synthase beta subunit [Micromonospora lupini]
          Length = 298

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|88608676|ref|YP_506638.1| F0F1 ATP synthase subunit beta [Neorickettsia sennetsu str.
           Miyayama]
 gi|118573703|sp|Q2GD08|ATPB_NEOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|88600845|gb|ABD46313.1| ATP synthase F1, beta subunit [Neorickettsia sennetsu str.
           Miyayama]
          Length = 474

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 162/306 (52%), Gaps = 17/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N +G+ IDG   + + +    I ++ PP  + Q       +TGI+VID+  P   G
Sbjct: 88  GRIFNVVGEIIDGGGPVPEPNKVSSIYAE-PPRFDMQSTSSEILETGIKVIDLLAPYSKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLGDN- 213
            ++G+F G+G+GK+ L+       +  +    + + VGER RE      E +E  + D  
Sbjct: 147 GKVGLFGGAGVGKTVLIMELINNIAKAYGGFSVFAGVGERTREGNDLYSEMVESGVIDKE 206

Query: 214 ---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269
                K V+V    +E P  R    ++A+T+AEYF  K G +VL  +D+I RF  +  E+
Sbjct: 207 HPEKSKVVLVYGQMNEPPGARAKVAMSALTMAEYFRDKEGQDVLFFVDNIFRFTQAGAEL 266

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +T  G +P A GY  ++ +++ RL ERI  +  + G+IT+V ++ V  D+  DP   +  
Sbjct: 267 STLLGRIPSAVGYQPTLATDMGRLQERI--TSTKNGSITSVQAIYVPADDITDPAPATSF 324

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R +AE G YP VD LAS ++ L+ +    +  ++   +  ++  ++  +D
Sbjct: 325 AHLDSTTVLSRQVAEAGIYPAVDALASSAQILSPEVLGQEHYEVAQKVKGILQSYKSLQD 384

Query: 389 IRLIGG 394
           I  I G
Sbjct: 385 IIAILG 390


>gi|326526259|dbj|BAJ97146.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 494

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 17/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G PID    + +      I  + P    +    +   TGI+V+D+  P   G 
Sbjct: 106 GRIMNVIGDPIDERGPI-ETKKRYPIHREAPSFDEQGSGAEILITGIKVVDMLAPYARGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A++     V    VGER RE  +   + +   +    
Sbjct: 165 KIGLFGGAGVGKTVVIQELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIKIN 223

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
               +  ++    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 224 QPGSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVS 283

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 284 ALLGRIPSAVGYQPTLATDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 341

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R+L E G YP VDPL S SR+ D     ++  ++   +  L+  ++  +DI
Sbjct: 342 FLDATTVLSRALTELGIYPAVDPLDSTSRILDPTVVGEKHYQVARGVQKLLQDYKSLQDI 401

Query: 390 RLIGG 394
             I G
Sbjct: 402 IAILG 406


>gi|307343646|emb|CBJ19240.1| atpD synthase beta subunit [Micromonospora nigra]
          Length = 307

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 10  LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 69

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 70  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 129

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 130 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 187

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 188 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFEVATEVKR 247

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 248 ILQRYKDLQDIIAILG 263


>gi|307343636|emb|CBJ19235.1| atpD synthase beta subunit [Micromonospora halophytica]
          Length = 298

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|11465725|ref|NP_053869.1| ATP synthase CF1 beta subunit [Porphyra purpurea]
 gi|1703717|sp|P51259|ATPB_PORPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1276725|gb|AAC08145.1| ATP synthase CF1 beta chain [Porphyra purpurea]
          Length = 475

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    + ++ I    P     +     F+TGI+V+D+  P  
Sbjct: 90  LGRIFNVLGEPVD---NLGPVSSESTLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYR 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 206

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNLK+S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 207 EDNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 266

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 267 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 324

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R+LA +G YP VDPL S S +        D       +   + R++E 
Sbjct: 325 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVGTDHYSTAQEVKSTLQRYKEL 384

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 385 QDIIAILG 392


>gi|326426456|gb|EGD72026.1| ATP synthase subunit beta [Salpingoeca sp. ATCC 50818]
          Length = 516

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    + K + ++ I ++ PP    +      +TGI+VID+  P   G
Sbjct: 113 LGRIMNVIGEPIDERGPI-KAESTLPIHAEAPPLTEMEVKPAILETGIKVIDLLAPYAKG 171

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +     +   
Sbjct: 172 GKIGLFGGAGVGKTVLIMELINNVAKAHSGYSVFAG-VGERTREGNDLYHEMQEGGVIDL 230

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDSITRF 262
                 K  +V    +E P  R    LT +T+AE         + +G +VL  +D+I RF
Sbjct: 231 ETPENSKVALVYGQMNEPPGARARVALTGLTVAESLRDLPDPSTGRGRDVLFFIDNIFRF 290

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +++  L ERI  +    G+IT+V +V V  D+  D
Sbjct: 291 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTTFGSITSVQAVYVPADDLTD 348

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381
           P   +  + LD   VL+R +AE G YP VDPL S SR+ D A   DE    +  +  ++ 
Sbjct: 349 PAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSASRVLDAAIVGDEHYACARDVQKILQ 408

Query: 382 RFEETRDIRLIGG 394
            ++  +DI  I G
Sbjct: 409 DYKSLQDIIAILG 421


>gi|312137462|ref|YP_004004799.1| ATP synthase, b subunit [Methanothermus fervidus DSM 2088]
 gi|311225181|gb|ADP78037.1| ATP synthase, B subunit [Methanothermus fervidus DSM 2088]
          Length = 461

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 147/278 (52%), Gaps = 15/278 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIR 150
           ++  S    GR+ +  GKPIDG    G   +  E +      MN   R+   +  +TGI 
Sbjct: 83  KLGVSMDMMGRIFDGTGKPIDG----GPEVIPEEELDITGSPMNPSARKYPAEFIQTGIS 138

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVRE 204
            ID    L  GQ++ +F+GSG+  + L +  AR       +    VI + +G    E   
Sbjct: 139 TIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLTEESEFAVIFTAMGITHEEANF 198

Query: 205 FIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           F++++     L++  V +  +D+  I R M P  A+T AEYF+ + D +VL+IL  +T +
Sbjct: 199 FMKEFERTGALERVTVFMNLADDPAIERIMTPRMALTTAEYFAFEYDMHVLVILTDMTNY 258

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             ++REI+    E+P  RGYP  ++++L  + ER G    +KG+IT +  +++  D+   
Sbjct: 259 CEALREISAAREEVPGRRGYPGYMYTDLASIYERAGRVHGKKGSITQMPILVMPQDDITH 318

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           PI D    I +G IVL+R L  +G YPPVD L S+SRL
Sbjct: 319 PIPDLTGYITEGQIVLSRELHRKGIYPPVDVLPSLSRL 356


>gi|183206536|gb|ACC54466.1| ATP synthase beta subunit [Cyphia elata]
          Length = 487

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 208

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 209 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 268

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 269 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 326

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 327 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 386

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 387 YKELQDIITILG 398


>gi|119350531|gb|ABL63216.1| AtpB [Planctonema sp. M110-1]
          Length = 393

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +G  + S+ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVGNKE-SLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEEN 157

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 158 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 218 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W    D       +   + R++E +D
Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEDHYNCAQLVKETLQRYKELQD 334

Query: 389 IRLIGG 394
           I  I G
Sbjct: 335 IIAILG 340


>gi|307343620|emb|CBJ19227.1| atpD synthase beta subunit [Micromonospora coriariae]
 gi|307343682|emb|CBJ19258.1| atpD synthase beta subunit [Micromonospora sp. GUI14]
          Length = 298

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGPEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|296282406|ref|ZP_06860404.1| F0F1 ATP synthase subunit beta [Citromicrobium bathyomarinum JL354]
          Length = 489

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+ ID    +G  + +  I ++ P  +++        TGI+VID+  P   G
Sbjct: 97  LGRIMNVIGEAIDERGPIG-AEKTAPIHAEAPEFVDQSTESSILVTGIKVIDLLAPYAKG 155

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   ++L   +    
Sbjct: 156 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 215

Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                     K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  
Sbjct: 216 AEGNATSEGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDEEGQDVLFFVDNIFRFTQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 276 AGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TSTNKGSITSVQAIYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD    LNR+++E G YP VDPL S SR+ +     +E  +    +   + ++
Sbjct: 334 PATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVLEPRVVGEEHYETARKVQETLQKY 393

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 394 KSLQDIIAILG 404


>gi|25027871|ref|NP_737925.1| F0F1 ATP synthase subunit beta [Corynebacterium efficiens YS-314]
 gi|259506262|ref|ZP_05749164.1| ATP synthase F1, beta subunit [Corynebacterium efficiens YS-314]
 gi|81749543|sp|Q8FQ20|ATPB_COREF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|23493154|dbj|BAC18125.1| H+-ATPase beta subunit [Corynebacterium efficiens YS-314]
 gi|259166166|gb|EEW50720.1| ATP synthase F1, beta subunit [Corynebacterium efficiens YS-314]
          Length = 481

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           G V NALG  +D    LG+ D     + + PP+ ++ +   +  +TGI+VID+ TP   G
Sbjct: 103 GHVFNALGDCLD-VPGLGR-DGEQWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVKG 160

Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217
            +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + F+E      L+ +
Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +
Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD   
Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            L+RS+A +G YP V+PL S SR+ + +   +    VS  +  ++ + +E +DI  I G
Sbjct: 339 ELDRSIASKGIYPAVNPLTSTSRILEPSIVGERHYEVSQRVIGILQKNKELQDIIAILG 397


>gi|307343680|emb|CBJ19257.1| atpD synthase beta subunit [Micromonospora sp. GUI13]
          Length = 298

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|163854647|ref|YP_001628945.1| F0F1 ATP synthase subunit beta [Bordetella petrii DSM 12804]
 gi|190358261|sp|A9HY42|ATPB_BORPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|163258375|emb|CAP40674.1| ATP synthase beta chain [Bordetella petrii]
          Length = 466

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + D    I    P         +  +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEAGPI-ESDEKRAIHQTAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +      L K 
Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESKVLDKV 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P
Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+  +   + R++E RDI  I G
Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 384


>gi|124112038|ref|YP_001019150.1| CF1 beta subunit of ATP synthase [Chlorokybus atmophyticus]
 gi|190358288|sp|Q19V65|ATPB_CHLAT RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|124012154|gb|ABD62170.2| CF1 beta subunit of ATP synthase [Chlorokybus atmophyticus]
          Length = 485

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG   + S   + + PPA      +   F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---NLGPVANKSTLPIHRDPPAFTELDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESK 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+   ++  +   + R
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|304322983|ref|YP_003795521.1| CF1 beta subunit of ATP synthase [Floydiella terrestris]
 gi|270048182|gb|ACZ58477.1| CF1 beta subunit of ATP synthase [Floydiella terrestris]
          Length = 489

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 157/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    +  + I    P   +       F+TGI+V+D+  P  
Sbjct: 98  LGRIFNVLGEPVD---NLGPVNTEEKLPIHRPAPAFTDLDTRLSIFETGIKVVDLLAPYR 154

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----------VREFI 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE           R  +
Sbjct: 155 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESRVIV 214

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHS 265
           E+ LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 215 EENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDMNKQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP +
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLASEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPSS 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+LA +G YP VDPL S S +       DE       +   + R +
Sbjct: 331 VATFAHLDATTVLSRNLAAKGIYPAVDPLDSNSVMLQPYIVGDEHYSCAQRVKGTLQRLK 390

Query: 385 ETRDIRLIGG 394
           E  DI  I G
Sbjct: 391 ELNDIIAILG 400


>gi|164566039|gb|ABY61162.1| ATP synthase beta subunit [Angiopteris angustifolia]
 gi|164566041|gb|ABY61163.1| ATP synthase beta subunit [Angiopteris evecta]
 gi|164566043|gb|ABY61164.1| ATP synthase beta subunit [Angiopteris sp. MJMC-2008]
          Length = 394

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|46360647|gb|AAS89105.1| ATP synthase beta subunit [Anastrophyllum michauxii]
          Length = 382

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|183206534|gb|ACC54465.1| ATP synthase beta subunit [Lobelia cardinalis]
          Length = 488

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 210 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|56697994|ref|YP_168365.1| F0F1 ATP synthase subunit beta [Ruegeria pomeroyi DSS-3]
 gi|81819934|sp|Q5LNP1|ATPB_SILPO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56679731|gb|AAV96397.1| ATP synthase F1, beta subunit [Ruegeria pomeroyi DSS-3]
          Length = 474

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 165/320 (51%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGI 149
           G   +   A   GR++N +G+P+D    +   +     + +  P+ + Q        TGI
Sbjct: 75  GPISVPVGAATLGRILNVIGEPVDEKGPVNATE--TRAIHQPAPSFDEQSTSSDILVTGI 132

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE--- 201
           +VID+  P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE   
Sbjct: 133 KVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGND 190

Query: 202 -VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
              E IE  +   +NL++S V  V    +E P  R    LT +T+AE F  + G +VL  
Sbjct: 191 LYHEMIESNVIKLENLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFF 250

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V
Sbjct: 251 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKAGSITSIQAVYV 308

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D     +E  ++  
Sbjct: 309 PADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPQVVGEEHYQVAR 368

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +  ++ R++  +DI  I G
Sbjct: 369 DVQGILQRYKSLQDIIAILG 388


>gi|317969006|ref|ZP_07970396.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CB0205]
          Length = 486

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I  + P   + +   K F+TGI+VID+  P  
Sbjct: 95  ATLGRIFNVLGEPVDEQGPVNT-TTTAPIHREAPKLTDLETKPKVFETGIKVIDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 154 QGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 213

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            ++L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 214 AEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +   +   DE  +   ++   + R++E 
Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|325105062|ref|YP_004274716.1| ATP synthase F1 subcomplex beta subunit [Pedobacter saltans DSM
           12145]
 gi|324973910|gb|ADY52894.1| ATP synthase F1 subcomplex beta subunit [Pedobacter saltans DSM
           12145]
          Length = 502

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 158/330 (47%), Gaps = 42/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N +G  IDG + L K +   + +   PP       E     TGI+VID+  P   G
Sbjct: 90  GRVFNVVGDAIDGIEELDKAN--GKSIHNAPPKFEDLSTENEILFTGIKVIDLIEPYAKG 147

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 148 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 207

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D                        K   V    +E P  R    L+ +T+AEYF     
Sbjct: 208 DEFMHSMENGGWDLSKVDKELMKDSKCTFVFGQMNEPPGARARVALSGLTVAEYFRDGED 267

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 268 DGQGKDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 325

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+   A 
Sbjct: 326 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPAV 385

Query: 366 SADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
              E    +  +  ++ R++E +DI  I G
Sbjct: 386 VGPEHYACAQRVKEILQRYKELQDIIAILG 415


>gi|2662326|dbj|BAA23755.1| proton-translocating ATPase beta subunit [Streptococcus equinus]
          Length = 469

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 161/317 (50%), Gaps = 12/317 (3%)

Query: 87  VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144
           VF  GR   +       GRV N LG  ID D+   + D   E + K  PA +        
Sbjct: 73  VFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPREPIHKKAPAFDELSTSSEI 131

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE
Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191

Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFSS-KGDNVLLILDS 258
             + + E      ++K+ +V    +E  +  +M   LT +TIAEYF   +G +VLL +D+
Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQRNEPTLGARMRVALTGLTIAEYFRDVEGQDVLLFIDN 251

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +K  +       V  D
Sbjct: 252 IFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKVLLHQSKPSTVPAD 309

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLT 377
           ++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    +  ++ + + 
Sbjct: 310 DYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQ 369

Query: 378 HLIHRFEETRDIRLIGG 394
            ++ R+ E +DI  I G
Sbjct: 370 RVLQRYRELQDIIAILG 386


>gi|307343638|emb|CBJ19236.1| atpD synthase beta subunit [Micromonospora inositola]
          Length = 302

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKHEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAAEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|183206622|gb|ACC54509.1| ATP synthase beta subunit [Campanula robinsiae]
          Length = 476

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGQDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D S    I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 89  IFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 205 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 265 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +  S D  +   ++   + R++E +D
Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDDHYETAQNVKQTLQRYKELQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IITILG 388


>gi|21684905|emb|CAD11579.1| ATP synthase beta subunit [Rostkovia magellanica]
          Length = 498

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 152/306 (49%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    + +  PA      E   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGQPID---NLGPVDTSTTFPIHRSAPAFIELNTELSIFQTGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++     
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFAGVGERTREGNDLYKEMKESG 220

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP V+PL S S +        E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRPLAAKGIYPAVNPLDSTSTMLQSNIVGKEHYETAQRVKQTSQRY 398

Query: 384 EETRDI 389
           +E +D+
Sbjct: 399 KELQDV 404


>gi|307343628|emb|CBJ19231.1| atpD synthase beta subunit [Micromonospora echinofusca]
          Length = 302

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|32473392|ref|NP_866386.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica SH 1]
 gi|32398072|emb|CAD78167.1| F0F1-ATPase beta chain [Rhodopirellula baltica SH 1]
          Length = 508

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 14/318 (4%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +S G  V   GR  ++       GRV++  G  +D  +SL    +    + + PP +NR 
Sbjct: 115 LSRGTPVRSCGRSMQVPVGKPLLGRVLDVFGNTLDDGESLKS--VEHRSIHQTPPTINR- 171

Query: 140 RVEKG--FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           R+ K   F TGI+ ID+ +PL  G + G+F G+G+GK+ L++    +       ISL   
Sbjct: 172 RIAKSEVFTTGIKAIDLLSPLERGGKAGLFGGAGVGKTVLITELIHNIVGGHDGISLFCG 231

Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           +GER RE  E   +     ++  +V+V    +E P  R      A+T+AE F      +V
Sbjct: 232 IGERCREAEELYREMGAAGVRDNTVMVFGQMNEPPGARFRVGHAALTMAESFRDDAKQDV 291

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++D+I RF  +  E++   G+LP   GY  S+ S+L  L ERI         IT+V +
Sbjct: 292 LLLIDNIFRFVQAGMEVSGLLGQLPSRVGYQPSLASDLAELEERI--CTTSDAAITSVQA 349

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP A    + L   +VL+R  A EG YP +DPL S S +       D   K
Sbjct: 350 VYVPADDFTDPSAVHTFAHLSATVVLSRKRASEGLYPAIDPLKSTSEMMLPGVVGDRHYK 409

Query: 372 LVSSLTHLIHRFEETRDI 389
             S++   +  +EE +DI
Sbjct: 410 TASNVRQTLAGYEELKDI 427


>gi|12585461|sp|Q9HM64|VATB_THEAC RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
          Length = 460

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 13/316 (4%)

Query: 60  GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+  R  L IV I     G       + F     R+  S    GRV N +G+PIDG  
Sbjct: 43  GQVLDTRKGLAIVQIFGATTGIGTQGTTVKFRGETARLPISEDMLGRVFNGIGEPIDGGP 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  MEI S      +R+   +  +TGI  ID    L  GQ++ +F+GSG+  + L
Sbjct: 103 EIIAKE-RMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQL 161

Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR       S+ F  V+   +G    E   F   +     L +SV+ +  S +  +
Sbjct: 162 AAQIARQAKVLDSSENF-AVVFGAMGITSEEANYFTNQFRETGALSRSVMFLNLSSDPSM 220

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P  A+T AEY +  KG ++L+IL  +T +  ++REI+    E+P  RGYP  +++
Sbjct: 221 ERIILPRIALTTAEYLAFQKGMHILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 280

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  +   G+IT +  + + GD+   P+ D    I +G IV++R L  +  Y
Sbjct: 281 DLSTIYERAGKLKGNNGSITQIPILTMPGDDITHPVPDLTGYITEGQIVISRDLNRKDMY 340

Query: 349 PPVDPLASVSRLADKA 364
           P +D L S+SRL ++ 
Sbjct: 341 PGIDVLLSLSRLMNQG 356


>gi|85709193|ref|ZP_01040259.1| ATP synthase beta subunit [Erythrobacter sp. NAP1]
 gi|85690727|gb|EAQ30730.1| ATP synthase beta subunit [Erythrobacter sp. NAP1]
          Length = 485

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+ ID    +G  D++  I ++ P  +++        TGI+VID+  P   G
Sbjct: 93  LGRIMNVVGEAIDERGPVG-ADMTSPIHAEAPAFVDQSTEADILVTGIKVIDLLAPYAKG 151

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   ++L   +    
Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 211

Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                     K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  
Sbjct: 212 EDGNAISEGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ V  D+  DP 
Sbjct: 272 AGSEVSALLGRIPSAVGYQPTLSTDMGNLQERI--TSTTKGSITSVQAIYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD    L+R+++E G YP VDPL S SR L  +    +  +    +   + ++
Sbjct: 330 PATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARRVQETLQKY 389

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 390 KSLQDIIAILG 400


>gi|190358734|sp|A2C6Z4|ATPB_PROM3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 488

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P     +     F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVTT-DATAPIHRPAPKLTELETKPTVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 SDDLSKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  +   S+   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|154001284|gb|ABS57117.1| ATP synthase beta subunit [Wollemia nobilis]
          Length = 424

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---DLGPVDARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 151 VIQEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|307343742|emb|CBJ19288.1| atpD synthase beta subunit [Micromonospora sp. SGA18]
          Length = 302

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|225569878|ref|ZP_03778903.1| hypothetical protein CLOHYLEM_05972 [Clostridium hylemonae DSM
           15053]
 gi|225161348|gb|EEG73967.1| hypothetical protein CLOHYLEM_05972 [Clostridium hylemonae DSM
           15053]
          Length = 457

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 161/315 (51%), Gaps = 13/315 (4%)

Query: 61  QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI-DGDD 117
           +V+ IN +  +V +     G  +S   + F      +  S    GRV + LG+PI DG +
Sbjct: 43  KVLEINGNDALVQLFESATGINLSNSKVRFLGRSMELGVSGDMLGRVFDGLGRPIDDGPE 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L +    +  +   P A  R   E+  +TG+  ID    L  GQ++ +F+ SG+  + L
Sbjct: 103 ILPEERRDINGLPMNPAA--RSYPEEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHANL 160

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR      +D    V+ + +G    E   F+E +     + ++V+ V  +++  I 
Sbjct: 161 AAQIARQAKVRGTDENFAVVFAAMGITFEESNFFVESFKETGAIDRTVLFVNLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D +VL+IL  IT +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTAAEYLAFEKDMHVLVILTDITNYADALREVSAARKEVPGRRGYPGYMYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G    +KG+IT +  + +  D+   PI D    I +G I+L+R L  +G  P
Sbjct: 281 LASLYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYRKGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+D L S+SRL DK 
Sbjct: 341 PIDVLPSLSRLKDKG 355


>gi|167758634|ref|ZP_02430761.1| hypothetical protein CLOSCI_00974 [Clostridium scindens ATCC 35704]
 gi|167663830|gb|EDS07960.1| hypothetical protein CLOSCI_00974 [Clostridium scindens ATCC 35704]
          Length = 457

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG+PID G + L +    +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SGDMLGRVFDGLGRPIDDGPEILPEERRDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F+E + 
Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDENFAVVFAAMGITFEESNFFVESFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               + ++V+ +  +++  I R   P  A+T AEY + + D +VL+IL  IT +A ++RE
Sbjct: 200 ETGAIDRTVLFINLANDPAIERISTPRMALTAAEYLAFEKDMHVLVILTDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  L ER G  + +KG+IT +  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKKGSITMIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383
             I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L     R 
Sbjct: 320 GYITEGQIILSRDLYRKGVQPPIDVLPSLSRLKDKGIGEGKTRADHSNTLNQLFAAYARG 379

Query: 384 EETRDIRLIGG 394
           ++ +++  I G
Sbjct: 380 KDAKELMTILG 390


>gi|119350529|gb|ABL63215.1| AtpB [Planctonema lauterbornii]
          Length = 393

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +G  + S+ I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVGNKE-SLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEEN 157

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 158 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 218 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W    D       +   + R++E +D
Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEDHYNCAQLVKETLQRYKELQD 334

Query: 389 IRLIGG 394
           I  I G
Sbjct: 335 IIAILG 340


>gi|254553613|gb|ACT67265.1| ATP synthase CF1 beta subunit [Joinvillea plicata]
          Length = 491

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213

Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 214 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGXYPAVDPLDSTSTMLQPRIVGEEHYEXAQRVKQTLXR 391

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 392 YKELQDI 398


>gi|307343718|emb|CBJ19276.1| atpD synthase beta subunit [Micromonospora sp. CR36]
          Length = 306

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|305671679|gb|ADM63149.1| ATP synthase beta subunit [Centranthus ruber]
          Length = 489

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTRFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +   A   D+  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPAIVGDKHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|170293967|gb|ACB13077.1| ATP synthase beta subunit [Pedinomonas minor]
          Length = 367

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +G  D  + I    P  ++       F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVLGEPVDNLGPVGAKD-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------E 207
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINE 138

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 139 GNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 196

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 197 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 254

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E
Sbjct: 255 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDEHYQTAQRVKQTLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|119487855|ref|ZP_01621352.1| ATP synthase F1, beta subunit [Lyngbya sp. PCC 8106]
 gi|119455431|gb|EAW36569.1| ATP synthase F1, beta subunit [Lyngbya sp. PCC 8106]
          Length = 482

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 162/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    + +  I    P     +     F+TGI+V+D+  P
Sbjct: 95  ATLGRIFNVLGEPVD---NLGPVNAETTFSIHRSAPAFTELETKPAVFETGIKVLDLLAP 151

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED- 208
              G +IG+F G+G+GK+     L++  A++     V   +  ER RE     +E IE  
Sbjct: 152 YRRGGKIGLFGGAGVGKTVIMMELVNNIAKAHGGVSVFGGVG-ERTREGNDLYQEMIESG 210

Query: 209 --YLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFA 263
              L D  K  + +V    +E P  R    L+A+ +AEYF   SK D VLL +D+I RF 
Sbjct: 211 VINLEDRTKSKIALVYGQMNEPPGARMRVGLSALAMAEYFRDVSKQD-VLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLGTDMGELQERI--TSTKEGSITSVQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R+LA +G YP VDPL S S +   +   DE  +   ++   + R
Sbjct: 328 APATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQSSVVGDEHYQTARAVQATLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIIAILG 399


>gi|307343716|emb|CBJ19275.1| atpD synthase beta subunit [Micromonospora sp. CR30]
          Length = 302

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|307343710|emb|CBJ19272.1| atpD synthase beta subunit [Micromonospora sp. GUI63]
          Length = 302

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|183206532|gb|ACC54464.1| ATP synthase beta subunit [Solenopsis minuta]
          Length = 498

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTHTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|16081191|ref|NP_393483.1| V-type ATP synthase subunit B [Thermoplasma acidophilum DSM 1728]
 gi|10639152|emb|CAC11154.1| probable ATP synthase (subunit B) [Thermoplasma acidophilum]
          Length = 476

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 13/316 (4%)

Query: 60  GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+  R  L IV I     G       + F     R+  S    GRV N +G+PIDG  
Sbjct: 59  GQVLDTRKGLAIVQIFGATTGIGTQGTTVKFRGETARLPISEDMLGRVFNGIGEPIDGGP 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  MEI S      +R+   +  +TGI  ID    L  GQ++ +F+GSG+  + L
Sbjct: 119 EIIAKE-RMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQL 177

Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR       S+ F  V+   +G    E   F   +     L +SV+ +  S +  +
Sbjct: 178 AAQIARQAKVLDSSENF-AVVFGAMGITSEEANYFTNQFRETGALSRSVMFLNLSSDPSM 236

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P  A+T AEY +  KG ++L+IL  +T +  ++REI+    E+P  RGYP  +++
Sbjct: 237 ERIILPRIALTTAEYLAFQKGMHILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 296

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  +   G+IT +  + + GD+   P+ D    I +G IV++R L  +  Y
Sbjct: 297 DLSTIYERAGKLKGNNGSITQIPILTMPGDDITHPVPDLTGYITEGQIVISRDLNRKDMY 356

Query: 349 PPVDPLASVSRLADKA 364
           P +D L S+SRL ++ 
Sbjct: 357 PGIDVLLSLSRLMNQG 372


>gi|332523630|ref|ZP_08399882.1| ATP synthase alpha/beta chain, C-terminal domain protein
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332314894|gb|EGJ27879.1| ATP synthase alpha/beta chain, C-terminal domain protein
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 460

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ ++ D  +V +     G  ++   + F      ++ S    GRV + +G+P+DG  
Sbjct: 44  GQVLEVHHDKAVVQLFEGSSGINLAKSKVRFTGHPLELAVSEDMVGRVFDGMGRPLDGGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  ++I  +    ++R   ++  +TGI  ID    L  GQ++ VF+GSG+  + L
Sbjct: 104 EL-IAEKFLDIDGQAINPISRDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNEL 162

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E   F+ED      + +SV+ +  +++  I 
Sbjct: 163 AAQIARQATVLGDDGKFAVVFAAIGITFEEAEFFMEDLRKTGAISRSVLFINLANDPAIE 222

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP  +++ 
Sbjct: 223 RIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 282

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G    + G++T +  + +  D+   PI D    I +G I+L+ +L   G  P
Sbjct: 283 LSTLYERAGRLVGKAGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHALYNSGLEP 342

Query: 350 PVDPLASVSRLADKA 364
           P+D L S+SRL DK 
Sbjct: 343 PIDILPSLSRLKDKG 357


>gi|283782164|ref|YP_003372919.1| ATP synthase F1, beta subunit [Pirellula staleyi DSM 6068]
 gi|283440617|gb|ADB19059.1| ATP synthase F1, beta subunit [Pirellula staleyi DSM 6068]
          Length = 482

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/333 (33%), Positives = 173/333 (51%), Gaps = 23/333 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+PID    +   ++   I  + P   +     + F+TGI+VID+ TP   G 
Sbjct: 96  GRVFNLLGEPIDARGPVSAKEM-WPIHREAPKLEDLSTSTELFETGIKVIDLLTPFVRGG 154

Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVR----EFIEDYLGDN-- 213
           + G+F G+G+GK+ +L  + AR         + + VGER RE      E  E  +G    
Sbjct: 155 KAGLFGGAGLGKTVILQELIARVAATHGGYSVFAGVGERTREGTDLWIEMQEAEIGQTGR 214

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             ++++ +V    +E P  R    L+A+T+AEYF  + G + LL +D+I RF+ +  E++
Sbjct: 215 KVIEQTCMVFGQMNEPPGARLRVALSALTMAEYFRDTTGKDTLLFVDNIFRFSQAGSEVS 274

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG IT+V +V V  D+  DP   +   
Sbjct: 275 ALLGRMPSAVGYQPTLATEMGALQERI--ASTKKGAITSVQAVYVPADDPTDPAPATAFG 332

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  I L RS++E+G YP VDPLAS SR+ D     A    +   +  ++ R+ E +DI
Sbjct: 333 QLDAFIYLERSISEKGIYPAVDPLASSSRILDPNIVGARHYAIARRVQGILQRYRELQDI 392

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I     GVD + +     VH+   I  FL Q
Sbjct: 393 IAI----LGVDELSEDDKLVVHRARRIERFLSQ 421


>gi|117926732|ref|YP_867349.1| F0F1 ATP synthase subunit beta [Magnetococcus sp. MC-1]
 gi|254808157|sp|A0LDA0|ATPB_MAGSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117610488|gb|ABK45943.1| ATP synthase F1 subcomplex beta subunit [Magnetococcus sp. MC-1]
          Length = 474

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 155/314 (49%), Gaps = 16/314 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GR++N +G+P D    +   + ++ I    P    +    +  +TGI+VID
Sbjct: 79  RVPVGRQTLGRILNVVGEPQDEKGPVETTE-TLPIHRPAPAFAQQATSAEILETGIKVID 137

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL 210
           +  P   G ++G+F G+G+GK+ L+     +   +     + + VGER RE  +   +  
Sbjct: 138 LLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAQEHGGYSVFAGVGERTREGNDLYHEMA 197

Query: 211 GDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261
              +         K+ ++    +E P  R    LT +T+AEYF    G +VL  +D+I R
Sbjct: 198 ESGVIDPNSWENSKAALIYGQMNEPPGARARVALTGLTVAEYFRDLGGQDVLFFVDNIFR 257

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V  D+  
Sbjct: 258 FTQAGAEVSALLGRIPSAVGYQPTLGTDMGALQERI--TTTKTGSITSVQAVYVPADDLT 315

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLI 380
           DP   +  S LD   VLNR+++E G YP VDPL S SR+ D K    +       +  ++
Sbjct: 316 DPAPATTFSHLDATTVLNRAISEMGIYPAVDPLDSTSRVLDPKVVGEEHYHTAREVQRIL 375

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 376 QTYKSLQDIIAILG 389


>gi|255692505|ref|ZP_05416180.1| ATP synthase F1, beta subunit [Bacteroides finegoldii DSM 17565]
 gi|260621780|gb|EEX44651.1| ATP synthase F1, beta subunit [Bacteroides finegoldii DSM 17565]
          Length = 505

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 161/328 (49%), Gaps = 48/328 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + + +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKGLDR-EGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE      
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 208 ------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS 247
                             DY  + L+KS V  V    +E P  R    L+ +T+AE F  
Sbjct: 210 GEAFKEGMEKGHWDLSKVDY--NELEKSQVSLVFGQMNEPPGARASVALSGLTVAESFRD 267

Query: 248 KGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
            G      ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  
Sbjct: 268 AGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TST 325

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+ D
Sbjct: 326 RKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILD 385

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDI 389
                 E   +   +  ++ R +E +DI
Sbjct: 386 PHIVGQEHYDVAQQVKQILQRNKELQDI 413


>gi|156530149|gb|ABU75171.1| AtpB [Odyendyea zimmermannii]
          Length = 480

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E  DI  I G
Sbjct: 381 KELPDIIAILG 391


>gi|313676739|ref|YP_004054735.1| ATP synthase f1 subcomplex beta subunit [Marivirga tractuosa DSM
           4126]
 gi|312943437|gb|ADR22627.1| ATP synthase F1 subcomplex beta subunit [Marivirga tractuosa DSM
           4126]
          Length = 502

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 159/331 (48%), Gaps = 42/331 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G  IDG D   +G   + I    P   +     +   TGI+VID+  P   G 
Sbjct: 90  GRLFNVIGDAIDGIDQ-PEGKTKLPIHRDAPRFEDLSTSSEVLYTGIKVIDLIEPYSKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   GD
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIVKYGD 208

Query: 213 NL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF------ 245
                                   K+  V    +E P  R    L+ +T+AEY+      
Sbjct: 209 EFMHSMEEGKWDLSKVDKEALKESKATFVFGQMNEPPGARARVALSGLTLAEYYRDGDKD 268

Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
            +  G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 269 SNETGKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKN 326

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  S LD   VL+R +AE G YP VDPL S SR+ +++
Sbjct: 327 GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRKIAELGIYPAVDPLDSTSRILERS 386

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              DE       +  ++ R++E +DI  I G
Sbjct: 387 IVGDEHYDCAQRVKEILQRYKELQDIIAILG 417


>gi|307343612|emb|CBJ19223.1| atpD synthase beta subunit [Micromonospora chersina]
          Length = 302

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E   V++ +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|139388101|ref|YP_001123293.1| ATPase beta subunit [Barbarea verna]
 gi|190358259|sp|A4QKB2|ATPB_BARVE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286492|dbj|BAF50117.1| ATPase beta subunit [Barbarea verna]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|88797167|ref|ZP_01112757.1| ATP synthase subunit B [Reinekea sp. MED297]
 gi|88780036|gb|EAR11221.1| ATP synthase subunit B [Reinekea sp. MED297]
          Length = 466

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 15/305 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +   + S+ I +  P    +   ++  +TGI+VID+  P   G
Sbjct: 83  LGRIMNVLGEPIDERGEIQTDERSV-IHADAPSYAEQAHSQEILETGIKVIDLVCPFAKG 141

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214
            ++G+F G+G+GK+  +     +   +   +S+   VGER RE  +F  +     +    
Sbjct: 142 GKVGLFGGAGVGKTVNMLELINNIATEHSGLSVFAGVGERTREGNDFYHEMSDAGVIQLE 201

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++
Sbjct: 202 KLEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 261

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  +
Sbjct: 262 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSVQAVYVPADDLTDPSPATTFA 319

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D +    D       +  ++ +++E +DI
Sbjct: 320 HLDATVVLSRDIAALGIYPAVDPLDSSSRQLDPQIIGNDHYNTARGVQGVLQKYKELKDI 379

Query: 390 RLIGG 394
             I G
Sbjct: 380 IAILG 384


>gi|56236584|gb|AAV84659.1| ATP synthase beta subunit [Cephalotaxus harringtonia]
          Length = 423

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  G L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 35  TTLGRIFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 151 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|150035735|gb|ABR67213.1| ATP synthase beta subunit [Joinvillea plicata]
          Length = 427

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 149

Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 150 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 268 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQR 327

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 328 YKELQDIIAILG 339


>gi|329766069|ref|ZP_08257628.1| V-type ATP synthase subunit B [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137340|gb|EGG41617.1| V-type ATP synthase subunit B [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 461

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 163/309 (52%), Gaps = 20/309 (6%)

Query: 102 CGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV + LG+P DG  D +   D  ++I  +      R+  +   +TG+ VID    L  
Sbjct: 90  LGRVFDGLGRPKDGLPDPIA--DKFIDINGEPMNPEQREYPKDFIQTGVSVIDGMITLVR 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+GSG+  + L +  AR        D F  V+ + +G +  E  E+    L ++
Sbjct: 148 GQKLPIFSGSGMSHNILAAQIARQASVVGTKDDF-AVVFAAIGVQYSEA-EYFRRSLEES 205

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             LK+SV+ + T+D+  I R + P  A+T+AEY +   G +VL+IL  +T +A ++REI+
Sbjct: 206 GALKRSVLFLNTADDPAIERIITPRVALTVAEYLAFDLGMHVLVILTDMTNYAEALREIS 265

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  +GYP  ++++L  + ER G     KG++T V  + +  D+   PI D    
Sbjct: 266 AAREEVPGRKGYPGYLYTDLSTIYERAGKLNGRKGSVTQVPILSMPSDDITHPIPDLTGY 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385
           I +G +VL R L  +G YPP++ L S+SRL      + +  AD  ++ + +     R +E
Sbjct: 326 ITEGQVVLGRDLFRQGVYPPINILMSLSRLMKDGIGEGSTRADHSEVSNQVYDAYSRAQE 385

Query: 386 TRDIRLIGG 394
            R +  I G
Sbjct: 386 VRALAGIVG 394


>gi|113910794|gb|ABI48129.1| ATPase beta subunit [Scapania nemorea]
          Length = 470

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|15425572|emb|CAC60324.1| ATP synthase beta subunit [Dialypetalum sp. Gustafsson 244]
          Length = 495

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 216

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 217 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 276

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 334

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 335 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 394

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 395 YKELQDIITILG 406


>gi|164566127|gb|ABY61206.1| ATP synthase beta subunit [Danaea nodosa]
          Length = 394

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSSPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDRYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSSML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|139389103|ref|YP_001123821.1| ATP synthase CF1 beta subunit [Nasturtium officinale]
 gi|190358687|sp|A4QLU0|ATPB_NASOF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134287026|dbj|BAF50645.1| ATPase beta subunit [Nasturtium officinale]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGSPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|114762051|ref|ZP_01441519.1| F0F1 ATP synthase subunit beta [Pelagibaca bermudensis HTCC2601]
 gi|114545075|gb|EAU48078.1| F0F1 ATP synthase subunit beta [Roseovarius sp. HTCC2601]
          Length = 474

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIF 155
              GR++N +G+P+D      +G +  E    + +  P  + Q  +     TGI+VID+ 
Sbjct: 84  ATLGRILNVVGEPVDE-----QGPVEAEEYRAIHQPAPEFDEQATDTEILVTGIKVIDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFI 206
            P   G +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E I
Sbjct: 139 APYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMI 196

Query: 207 EDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
           E  +   DNL  S V  V    +E P  R    LT +T+AE F  + G +VL  +D+I R
Sbjct: 197 ESNVIKPDNLSDSQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +V V  D+  
Sbjct: 257 FTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLT 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VLNR+++E G YP VDPL S SR+ D      E   V+  +  ++
Sbjct: 315 DPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSNSRILDPQVVGQEHYDVAREVQGIL 374

Query: 381 HRFEETRDIRLIGG 394
            R++  +DI  I G
Sbjct: 375 QRYKSLQDIIAILG 388


>gi|89053540|ref|YP_508991.1| F0F1 ATP synthase subunit beta [Jannaschia sp. CCS1]
 gi|118573688|sp|Q28TJ6|ATPB_JANSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|88863089|gb|ABD53966.1| ATP synthase F1 subcomplex beta subunit [Jannaschia sp. CCS1]
          Length = 474

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 161/308 (52%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +   +    I    P   ++    +   TGI+V+D+  P   G
Sbjct: 86  LGRILNVVGEPVDEGGPV-DAEERRGIHQDAPEFADQSTEAEVLVTGIKVVDLLAPYSKG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED--YL 210
            +IG+F G+G+GK+ L+     +    KV     + + VGER RE      E IE    +
Sbjct: 145 GKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGVIV 202

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
            DNL +S   +V    +E P  R    L+ +T+AE F  + G +VL  +D+I RF  +  
Sbjct: 203 PDNLPESKIALVYGQMNEPPGARMRIALSGLTLAEQFRDATGADVLFFIDNIFRFTQAGS 262

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  + ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 263 EVSALLGRIPSAVGYQPTLATDMGTMQERI--TSTKRGSITSIQAVYVPADDLTDPAPAT 320

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD   VL+R+++E G YP VDPL S SRL D     DE   V+  +  ++ R++  
Sbjct: 321 TFAHLDATTVLSRAISELGIYPAVDPLDSSSRLMDPTIVGDEHYQVARDVQGILQRYKSL 380

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 381 QDIIAILG 388


>gi|75330509|sp|Q8MBQ4|ATPB_IPOCC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633251|gb|AAM52100.1| ATP synthase beta subunit [Ipomoea coccinea]
          Length = 490

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 102 GSTLGRIFNVLGQPVDNLGPVNTNTTS-PIHKSAPAFIQLDTKLSIFETGIKVVDLLPPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G G+GK+ L+     +       +S+ G  G   RE  + YL        
Sbjct: 161 RRGGKIGLFGGXGVGKTLLIMELINNIAKAHGGLSVFGGVGERTREGNDLYLEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|56236582|gb|AAV84658.1| ATP synthase beta subunit [Araucaria bidwillii]
          Length = 424

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
           A   GR+ N LG+P+D    LG  +  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 34  AATLGRIFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 151 VIQEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|221633211|ref|YP_002522436.1| ATP synthase F1 subunit beta [Thermomicrobium roseum DSM 5159]
 gi|221156187|gb|ACM05314.1| ATP synthase F1, beta subunit [Thermomicrobium roseum DSM 5159]
          Length = 473

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 168/302 (55%), Gaps = 15/302 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160
            GR+ N +G+PID    +  GD     + +  P+   Q  + + F+TG++VID+  P   
Sbjct: 93  LGRIFNVVGEPIDEQGPV-PGDAPRWPIHRPAPSFEEQSTQVEVFETGLKVIDLVAPFTK 151

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGDN 213
           G ++GVF G+G+GK+ ++    R+   +    S+   VGER RE     RE  E  + D 
Sbjct: 152 GGKVGVFGGAGVGKTVIIMELIRNIAAEHGGYSVFCGVGERTREGTQLWREMRESGVID- 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
             K+V+V    +E P  R    LT +T+AEYF  +G +VLL +D+I RF  +  E++   
Sbjct: 211 --KTVLVFGQMNEPPGARLRVGLTGLTMAEYFRDEGRDVLLFIDNIFRFVQAGSEVSVLL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +++ +L ERI  +  ++G+IT+V ++ V  D++ DP   +  + LD
Sbjct: 269 GRMPSAVGYQPTLGTDMGQLQERI--TSTKRGSITSVQAIYVPADDYTDPAPATTFAHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
             I L RS+AE+G YP VDPLAS SR+ D      +  ++   +  ++ R+ + +DI  I
Sbjct: 327 ATIALERSIAEQGLYPAVDPLASTSRILDPNIVGVEHYRVAREVQRVLQRYRDLQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|126665453|ref|ZP_01736435.1| F0F1 ATP synthase subunit alpha [Marinobacter sp. ELB17]
 gi|126630081|gb|EBA00697.1| F0F1 ATP synthase subunit alpha [Marinobacter sp. ELB17]
          Length = 549

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 164/330 (49%), Gaps = 17/330 (5%)

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME--IMSK 131
           +G  E I LG+ V    +    P      GRV++A+G P DG   LG      E  + ++
Sbjct: 112 LGPSEHIRLGEDVRRTRKVISVPVGPALLGRVVDAVGLPRDG---LGVIAAVAEHPVEAE 168

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDC 186
            P  ++R  + K   TGI+ ID   P+  GQR  +      GK+     T+L+   RSD 
Sbjct: 169 APGVLSRSAIFKPLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLNQI-RSDV 227

Query: 187 FDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
               I   +G+RG  V   I     GD + +S+V+ A  +E+P L  +AP  A+T+AEYF
Sbjct: 228 I--CIYCAIGQRGDAVSRVIGALKKGDMMARSIVMSAGDEETPGLAYIAPYAAMTMAEYF 285

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
             +G +VL+I D +T  A S RE++      P    +P  +F    RLLER G   +E  
Sbjct: 286 CDQGRDVLIIFDDLTHHARSYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFTEEVG 345

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA+  V    +N +  I  ++ SI DG I L+  L ++ ++P V    SVSR+  K
Sbjct: 346 GGSITALPVVETQAENLSAYIPTNLISITDGQIYLSPQLVQKNQFPAVHQGLSVSRVGSK 405

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           A S   +K+  +L   + +FEE  D    G
Sbjct: 406 AQSRALRKVAGNLRVTLSQFEELEDFARFG 435


>gi|55056912|emb|CAF21957.1| ATP synthase beta subunit [Torreya californica]
          Length = 441

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  G L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 72  TTLGRIFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 128

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 129 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 187

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 188 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 247

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 248 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 305

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 306 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 365

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 366 KELQDIIAILG 376


>gi|209525902|ref|ZP_03274437.1| ATP synthase F1, beta subunit [Arthrospira maxima CS-328]
 gi|209493711|gb|EDZ94031.1| ATP synthase F1, beta subunit [Arthrospira maxima CS-328]
          Length = 485

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 165/312 (52%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N +G+PID   +LG    D +  I    P  ++ +     F+TGI+V+D+  P  
Sbjct: 97  LGRIFNVVGEPID---NLGPVPNDETSSIHRPAPAFVDLETSPSVFETGIKVVDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE---- 207
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE      E IE    
Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESGVI 212

Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFA 263
             + LG +  K  +V    +E P  R    L+A+T+AEYF   SK D VLL +D+I RF 
Sbjct: 213 NKEDLGQS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDVSKQD-VLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+RSLA +G YP VDPL S S +   +   +E  +   ++   + R
Sbjct: 328 APATTFAHLDATTVLSRSLASKGIYPAVDPLDSSSTMLQPSVVGEEHYQTARAVQSTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIIAILG 399


>gi|75330428|sp|Q8MBG4|ATPB_CUSSA RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633449|gb|AAM52199.1| ATP synthase beta subunit [Cuscuta sandwichiana]
 gi|66876462|gb|AAY58014.1| AtpB [Cuscuta sandwichiana]
          Length = 494

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +    LS  I    PP +        F+TGI+V+D+  P   G
Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214
            ++G+F G+G+GK+ L+     +         +   VGER RE      E  E  + +  
Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 223 KLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RSLA +G YP VDPL S S +       ++  K    +   + R++E +D
Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGEQHYKTAQRVKQTLQRYKELQD 400

Query: 389 IRLIGG 394
           I  I G
Sbjct: 401 IIAILG 406


>gi|139389425|ref|YP_001123122.1| ATP synthase CF1 beta subunit [Olimarabidopsis pumila]
 gi|190358694|sp|A4QJU0|ATPB_OLIPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286319|dbj|BAF49946.1| ATPase beta subunit [Olimarabidopsis pumila]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|56808687|ref|ZP_00366409.1| COG1156: Archaeal/vacuolar-type H+-ATPase subunit B [Streptococcus
           pyogenes M49 591]
 gi|209558709|ref|YP_002285181.1| V-type ATP synthase subunit B [Streptococcus pyogenes NZ131]
 gi|238058280|sp|B5XJH4|VATB_STRPZ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|209539910|gb|ACI60486.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes NZ131]
          Length = 471

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L D  +H G+     GQV+ +  D  +V +     G  ++   + F      ++ S
Sbjct: 27  HYNELVDITLHNGERRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHSLELAVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ + +G+PIDG   L   +  ++I  +    + R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFDGMGQPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY +  KG +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L++ L + G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357


>gi|307343740|emb|CBJ19287.1| atpD synthase beta subunit [Micromonospora sp. SGA16]
          Length = 306

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 5   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 64

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 65  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 124

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 125 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 182

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E   V++ +  
Sbjct: 183 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFAVATEVKR 242

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 243 ILQRYKDLQDIIAILG 258


>gi|297837941|ref|XP_002886852.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332693|gb|EFH63111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|139522589|gb|ABO77689.1| ATP synthase beta subunit [Siphocampylus affinis]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRXTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMEXINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|6687737|emb|CAB65057.1| ATP synthase beta subunit [Hydrolea ovata]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 183/371 (49%), Gaps = 33/371 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SA 99
           +V QG+  D+LGQ I +  ++        V    +   + ++ G  V   G     P   
Sbjct: 47  LVVQGR--DSLGQPINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAAISVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D S    I    P  +  +     F+TGI+V+D+  P
Sbjct: 105 STLGRIFNVLGEPVD---DLGPVDASTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESK 220

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +   +N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYQTAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|15422202|emb|CAC60316.1| ATP synthase beta subunit [Abrophyllum ornans]
          Length = 496

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 217

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 218 GVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  K    +   + R
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYKTAQRVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIITILG 407


>gi|305671677|gb|ADM63148.1| ATP synthase beta subunit [Patrinia triloba]
          Length = 442

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 55  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 111

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 112 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 170

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 171 GVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 230

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 231 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 288

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + R
Sbjct: 289 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGDKHYETAQRVKQTLQR 348

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 349 YKELQDIIAILG 360


>gi|228016078|gb|ACP50916.1| ATP synthase CF1 beta subunit [Pinus rzedowskii]
          Length = 492

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|148553547|ref|YP_001261129.1| F0F1 ATP synthase subunit beta [Sphingomonas wittichii RW1]
 gi|190358706|sp|A5V3X5|ATPB_SPHWW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148498737|gb|ABQ66991.1| ATP synthase F1, beta subunit [Sphingomonas wittichii RW1]
          Length = 484

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 158/321 (49%), Gaps = 21/321 (6%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           + R+       GR++N +G+PID    +     S  I ++ P  +++        TGI+V
Sbjct: 81  QIRVPVGPQTLGRILNVIGEPIDERGPVNATQTS-PIHAEAPLFVDQSTDASILVTGIKV 139

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIED 208
           ID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  +   +
Sbjct: 140 IDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHE 199

Query: 209 YLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLL 254
           +L   +              K  +V    +E P  R    L+ +TIAEYF   +G +VL 
Sbjct: 200 FLDAGVIAKDADGNPTPEGSKVALVFGQMNEPPGARARVALSGLTIAEYFRDVEGQDVLF 259

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V ++ 
Sbjct: 260 FVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTNKGSITSVQAIY 317

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373
           V  D+  DP   +  + LD    LNR+++E G YP VDPL S SR+ +      E  +  
Sbjct: 318 VPADDLTDPAPATSFAHLDATTNLNRAISELGIYPAVDPLDSTSRMLEPRIVGQEHYETA 377

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
            ++   + +++  +DI  I G
Sbjct: 378 RAVQETLQKYKSLQDIIAILG 398


>gi|56236586|gb|AAV84660.1| ATP synthase beta subunit [Torreya californica]
          Length = 423

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  G L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 35  TTLGRIFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 151 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|33327747|gb|AAQ09237.1| ATP synthase beta subunit [Euonymus alatus]
          Length = 490

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S   ++ K  PA  +   +   F+TGI+V+D+  P
Sbjct: 98  ATLGRIFNVLGEPVD---NLGPVDTSTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 215 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 332

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 392

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 393 ELQDIIAILG 402


>gi|319778925|ref|YP_004129838.1| ATP synthase beta chain [Taylorella equigenitalis MCE9]
 gi|317108949|gb|ADU91695.1| ATP synthase beta chain [Taylorella equigenitalis MCE9]
          Length = 467

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + + +    I    P         +  +TGI+VID+  P   G 
Sbjct: 93  GRIMDVLGRPIDEAGPI-EHEEKRSIHQPAPKFDELSPSVELLETGIKVIDLVCPFAKGG 151

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +    N L K 
Sbjct: 152 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 210

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G ++LL +D+I R+  +  E++   G +P
Sbjct: 211 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMP 270

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +V
Sbjct: 271 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 328

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G YP VDPL S SR  D     +E   V+ ++   + R+++ RDI  I G
Sbjct: 329 LSRDIASLGIYPAVDPLDSSSRQLDPHVVGEEHYSVARAVQQTLQRYKDLRDIIAILG 386


>gi|288922995|ref|ZP_06417152.1| ATP synthase F1, beta subunit [Frankia sp. EUN1f]
 gi|288345671|gb|EFC80043.1| ATP synthase F1, beta subunit [Frankia sp. EUN1f]
          Length = 479

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 14/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           G V N LG P+D D    K D +    I    P     +   + F TGI+VID+  P   
Sbjct: 105 GHVFNVLGNPLDVD----KVDAATYWPIHRSAPTFDQLESKTEMFTTGIKVIDLLAPYVR 160

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKK 216
           G +IG+F G+G+GK+ ++    R  +  F  V + + VGER RE  + F+E      ++ 
Sbjct: 161 GGKIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIED 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    DE P  R    L A+T+AEYF   +  +VLL +D+I RF  +  E++T  G 
Sbjct: 221 TALVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD  
Sbjct: 281 MPSAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQ 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            VL+RS+++ G YP V PL S SR+ D  +           +  ++ R+++ +DI  I G
Sbjct: 339 TVLDRSISDLGIYPAVSPLDSNSRILDPRYIGQTHYDTAREVQRILQRYKDLQDIIAILG 398


>gi|139522595|gb|ABO77693.1| ATP synthase beta subunit [Centropogon aequatorialis]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|6687280|emb|CAB64905.1| ATP synthase beta subunit [Codonopsis pilosula]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIITILG 409


>gi|224024062|ref|ZP_03642428.1| hypothetical protein BACCOPRO_00779 [Bacteroides coprophilus DSM
           18228]
 gi|224017284|gb|EEF75296.1| hypothetical protein BACCOPRO_00779 [Bacteroides coprophilus DSM
           18228]
          Length = 508

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 163/327 (49%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N +G+ IDG   L + D    I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 95  GRVMNVVGETIDGMKELDRTD-GFPIHREPPKFEDLATTQEVLFTGIKVIDLLEPYLKGG 153

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 154 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 211

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248
           GD   KS+                     +V    +E P  R+   L+ +T+AE F  + 
Sbjct: 212 GDEFLKSMEEGNWDLSKVDYNEVEKSQVAMVFGQMNEPPGARQSVALSGLTLAESFRDRK 271

Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            GDN    +L  +D+I RF  +  E++   G +P A GY  ++ +E+ ++ ERI  +  +
Sbjct: 272 TGDNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 329

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 389

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  +    +  ++ R +E +DI
Sbjct: 390 LIVGKEHYETAQRVKQILQRNKELQDI 416


>gi|224179401|ref|YP_002600811.1| CF1 beta subunit of ATP synthase [Pycnococcus provasolii]
 gi|217314444|gb|ACK36786.1| CF1 beta subunit of ATP synthase [Pycnococcus provasolii]
          Length = 482

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%)

Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D  GD S    D ++ I  K P   +       F++GI+V+D+  P   
Sbjct: 98  GRIFNVLGEPVDSMGDVSTA-ADGTLPIHRKAPAFADLDTNLAIFESGIKVVDLLAPYRR 156

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            
Sbjct: 157 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESGVIN 215

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E+ L D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 216 ENKLTDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 274 GAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W    +   +  ++  ++ R+
Sbjct: 332 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYDVAQNIKQILQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|5758881|gb|AAD50855.1| ATP synthase beta subunit [Globba curtisii]
          Length = 496

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    I       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSIPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S    I    PP +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHRPAPPFIELDTKFSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|139522631|gb|ABO77717.1| ATP synthase beta subunit [Burmeistera lutosa]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|19033051|gb|AAL83510.1|AF408782_1 ATP synthase beta subunit [Chara connivens]
          Length = 402

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|88807398|ref|ZP_01122910.1| ATP synthase subunit B [Synechococcus sp. WH 7805]
 gi|88788612|gb|EAR19767.1| ATP synthase subunit B [Synechococcus sp. WH 7805]
          Length = 487

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P     +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPV-NASATAPIHRSAPKLTELETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            ++L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 AEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +   A    D  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGEDHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|183206592|gb|ACC54494.1| ATP synthase beta subunit [Microcodon glomeratum]
          Length = 486

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 207

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 208 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +  S +  +   S+   + R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSHEHYETAQSVKQTLQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIITILG 397


>gi|139522541|gb|ABO77657.1| ATP synthase beta subunit [Lobelia polyphylla]
 gi|139522544|gb|ABO77659.1| ATP synthase beta subunit [Lobelia excelsa]
 gi|139522547|gb|ABO77661.1| ATP synthase beta subunit [Lobelia tupa]
 gi|139522550|gb|ABO77663.1| ATP synthase beta subunit [Lobelia bridgesii]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|113910804|gb|ABI48134.1| ATPase beta subunit [Nowellia curvifolia]
          Length = 454

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 69  LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 186 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 304 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 362

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 363 LQDIIAILG 371


>gi|7708288|emb|CAB90068.1| ATP synthase beta subunit [Euonymus alatus]
          Length = 484

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S   ++ K  PA  +   +   F+TGI+V+D+  P
Sbjct: 98  ATLGRIFNVLGEPVD---NLGPVDTSTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 215 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 332

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 392

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 393 ELQDIIAILG 402


>gi|294678490|ref|YP_003579105.1| ATP synthase F1 subunit beta [Rhodobacter capsulatus SB 1003]
 gi|2493025|sp|P72247|ATPB_RHOCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|1524324|emb|CAA67910.1| FoF1 ATP synthase [Rhodobacter capsulatus]
 gi|294477310|gb|ADE86698.1| ATP synthase F1, beta subunit [Rhodobacter capsulatus SB 1003]
          Length = 472

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+P+D    + K + +  I    P    +    +   TGI+VID+  P  
Sbjct: 83  ATLGRILNVIGEPVDERGDVSKAE-ARAIHQPAPDFAAQSTESQILVTGIKVIDLLAPYS 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLGD-- 212
            G +IG+F G+G+GK+ L+     +    KV     + + VGER RE  +   + +    
Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESGV 199

Query: 213 -NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
            NL+K       +V    +E P  R    LT +T+AE F  + G +VL  +D+I RF  +
Sbjct: 200 INLEKLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP  
Sbjct: 260 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+++E G YP VDPL S SR+ D     +E  ++   +  ++ R++
Sbjct: 318 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQVVGEEHYQVARDVQGMLQRYK 377

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 378 SLQDIIAILG 387


>gi|307343708|emb|CBJ19271.1| atpD synthase beta subunit [Micromonospora sp. GUI61]
          Length = 298

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   V L +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVSLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYSPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|156530129|gb|ABU75161.1| AtpB [Eurycoma longifolia]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   S  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTSSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ + +  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTXMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14717935|gb|AAK72710.1| ATP synthase beta subunit [Androstachys johnsonii]
          Length = 485

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +      K F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLKIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       D+  ++   +   + R+
Sbjct: 332 PATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVGDDHYEIAQKVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|307343738|emb|CBJ19286.1| atpD synthase beta subunit [Micromonospora sp. SGA9]
          Length = 307

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+ + +DI  I G
Sbjct: 239 ILQRYRDLQDIIAILG 254


>gi|71277378|gb|AAZ29869.1| ATP synthase beta subunit [Chara zeylanica]
          Length = 349

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|139522565|gb|ABO77673.1| ATP synthase beta subunit [Centropogon baezanus]
          Length = 498

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|158312878|ref|YP_001505386.1| F0F1 ATP synthase subunit beta [Frankia sp. EAN1pec]
 gi|226740202|sp|A8L3W5|ATPB_FRASN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158108283|gb|ABW10480.1| ATP synthase F1, beta subunit [Frankia sp. EAN1pec]
          Length = 479

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V N LG P+D D      +    I    P     +   + F TGI+VID+  P   G 
Sbjct: 105 GHVFNVLGNPLDVDKV--DAETYWPIHRSAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 162

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+  G+G+GK+ ++    R  +  F  V + + VGER RE  + F+E      ++ + 
Sbjct: 163 KIGLMGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD + V
Sbjct: 283 SAVGYQPTLADEMGALQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDANTV 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++++ G YP V PL S SR+ D  +   E       +  ++ R+++ +DI  I G
Sbjct: 341 LDRAISDLGIYPAVSPLDSNSRILDARYIGQEHYDTAREVQRILQRYKDLQDIIAILG 398


>gi|72382808|ref|YP_292163.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str.
           NATL2A]
 gi|118573720|sp|Q46J68|ATPB_PROMT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|72002658|gb|AAZ58460.1| ATP synthase F1 subcomplex beta subunit [Prochlorococcus marinus
           str. NATL2A]
          Length = 488

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    L K   +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGDL-KNVTTSPIHRSAPSLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            ++L KS + +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 SEDLTKSKLALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|29346121|ref|NP_809624.1| F0F1 ATP synthase subunit beta [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568455|ref|ZP_04845866.1| ATP synthase subunit beta [Bacteroides sp. 1_1_6]
 gi|298385487|ref|ZP_06995045.1| ATP synthase F1, beta subunit [Bacteroides sp. 1_1_14]
 gi|81842285|sp|Q8A9V4|ATPB_BACTN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|29338015|gb|AAO75818.1| ATP synthase beta chain [Bacteroides thetaiotaomicron VPI-5482]
 gi|251842528|gb|EES70608.1| ATP synthase subunit beta [Bacteroides sp. 1_1_6]
 gi|298261628|gb|EFI04494.1| ATP synthase F1, beta subunit [Bacteroides sp. 1_1_14]
          Length = 505

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 162/328 (49%), Gaps = 48/328 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG  SL +   +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKSLDRTG-AYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE      
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 208 ------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS 247
                             DY  + L+KS V  +    +E P  R    L+ +T+AE F  
Sbjct: 210 GEAFKESMEKGDWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFRD 267

Query: 248 KGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
            G      ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  
Sbjct: 268 AGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TST 325

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+ D
Sbjct: 326 RKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILD 385

Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDI 389
                 E   V+  +  ++ R +E +DI
Sbjct: 386 PHIVGQEHYDVAQRVKQILQRNKELQDI 413


>gi|317502818|ref|ZP_07960921.1| ATP synthase F1 sector beta subunit [Prevotella salivae DSM 15606]
 gi|315666058|gb|EFV05622.1| ATP synthase F1 sector beta subunit [Prevotella salivae DSM 15606]
          Length = 508

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR++N +GKPIDG       +L+ME    + +  P  ++    K    TGI+VID+  P 
Sbjct: 95  GRMMNVIGKPIDG-----MAELNMEGAYPIHRPAPTFDQLSTHKEMLATGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE  + + D L     
Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLDSGVI 209

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247
             G+  KK++                     +V    +E P  R    L+ +T+AE F  
Sbjct: 210 KYGEAFKKAMEEGRWDLSLVDKKELSESQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269

Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            G       +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 270 HGGKDGESADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V +V V  D+  DP   +  S LD    L+R +AE G YP VDPL S SR+ 
Sbjct: 328 TKNGSITSVQAVYVPADDLTDPAPATTFSHLDATTELSRKIAELGIYPAVDPLGSTSRIL 387

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D      E       +  L+ R+ E +DI  I G
Sbjct: 388 DPLIVGKEHYNCAQRVKQLLQRYNELQDIIAILG 421


>gi|228016707|gb|ACP51535.1| ATP synthase CF1 beta subunit [Pinus aristata]
          Length = 492

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|15425570|emb|CAC60321.1| ATP synthase beta subunit [Dampiera spicigera]
          Length = 489

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G D++       +       GR
Sbjct: 41  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 101 IFNVLGEPVD---DLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQN 217

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    G +VLL +D+I RF  +  E++
Sbjct: 218 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQAGSEVS 277

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 278 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 335

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 336 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 395

Query: 390 RLIGG 394
             I G
Sbjct: 396 IAILG 400


>gi|119350483|gb|ABL63192.1| AtpB [Draparnaldia plumosa]
          Length = 388

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +  + I    P   +       F+TGI+V+D+  P  
Sbjct: 34  LGRIFNVLGEPVD---NLGPVEAEQKLPIHRSAPAFTDLDTRLAIFETGIKVVDLLAPYR 90

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD---- 212
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +        
Sbjct: 91  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVIN 150

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 151 ESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 210

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 211 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 268

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       DE       +   + R++E 
Sbjct: 269 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYGCAQQVKQTLQRYKEL 328

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 329 QDIIAILG 336


>gi|71370908|gb|AAZ30683.1| ATP synthase beta subunit [Crepidula fornicata]
          Length = 350

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 14/279 (5%)

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  + P  ++    ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 12  IHQEAPDYVDMSVEQEILETGIKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK 71

Query: 188 DK---VIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLT 237
                 + + VGER RE  +   +        L D+  K  +V    +E P  R    LT
Sbjct: 72  AHRGYSVFAGVGERTREGNDLYHEMITSRVISLDDDTSKVSLVYGQMNEPPGARARVALT 131

Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ER
Sbjct: 132 GLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQER 191

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S
Sbjct: 192 I--TTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDS 249

Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            SR+ D     +E  K   ++  ++  F+  +DI  I G
Sbjct: 250 TSRILDPNIVGEEHYKTARAVQKILQDFKSLQDIIAILG 288


>gi|139522559|gb|ABO77669.1| ATP synthase beta subunit [Centropogon granulosus subsp. nutans]
 gi|139522562|gb|ABO77671.1| ATP synthase beta subunit [Centropogon granulosus subsp.
           granulosus]
 gi|139522568|gb|ABO77675.1| ATP synthase beta subunit [Centropogon solanifolius]
 gi|139522571|gb|ABO77677.1| ATP synthase beta subunit [Centropogon solanifolius]
 gi|139522574|gb|ABO77679.1| ATP synthase beta subunit [Siphocampylus tupaeformis]
 gi|139522577|gb|ABO77681.1| ATP synthase beta subunit [Siphocampylus ecuadorensis]
 gi|139522580|gb|ABO77683.1| ATP synthase beta subunit [Siphocampylus ecuadorensis]
 gi|139522583|gb|ABO77685.1| ATP synthase beta subunit [Centropogon sp. UCBG 902279]
 gi|139522586|gb|ABO77687.1| ATP synthase beta subunit [Centropogon tessmannii]
 gi|139522592|gb|ABO77691.1| ATP synthase beta subunit [Siphocampylus giganteus]
 gi|139522598|gb|ABO77695.1| ATP synthase beta subunit [Centropogon sodiroanus]
 gi|139522601|gb|ABO77697.1| ATP synthase beta subunit [Centropogon sodiroanus]
 gi|139522604|gb|ABO77699.1| ATP synthase beta subunit [Centropogon grandidentatus]
 gi|139522607|gb|ABO77701.1| ATP synthase beta subunit [Centropogon llanganatensis]
 gi|139522610|gb|ABO77703.1| ATP synthase beta subunit [Centropogon glabrifilis]
 gi|139522613|gb|ABO77705.1| ATP synthase beta subunit [Centropogon medusa]
 gi|139522616|gb|ABO77707.1| ATP synthase beta subunit [Centropogon salviiformis]
 gi|139522619|gb|ABO77709.1| ATP synthase beta subunit [Centropogon comosus]
 gi|139522622|gb|ABO77711.1| ATP synthase beta subunit [Centropogon nigricans]
 gi|139522634|gb|ABO77719.1| ATP synthase beta subunit [Burmeistera ceratocarpa]
          Length = 498

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|139389649|ref|YP_001123206.1| ATPase beta subunit [Arabis hirsuta]
 gi|190358254|sp|A4QK25|ATPB_ARAHI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286404|dbj|BAF50030.1| ATPase beta subunit [Arabis hirsuta]
          Length = 498

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|183206504|gb|ACC54450.1| ATP synthase beta subunit [Codonopsis lanceolata]
          Length = 482

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 205 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIITILG 393


>gi|139522553|gb|ABO77665.1| ATP synthase beta subunit [Lysipomia pumila]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|20384955|gb|AAM19144.1| ATP synthase beta subunit [Chara rusbyana]
          Length = 402

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQRTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|57641538|ref|YP_184016.1| V-type ATP synthase subunit B [Thermococcus kodakarensis KOD1]
 gi|73920417|sp|Q5JIR2|VATB_PYRKO RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|57159862|dbj|BAD85792.1| archaeal/vacuolar-type H+-ATPase, subunit B [Thermococcus
           kodakarensis KOD1]
          Length = 465

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 180/359 (50%), Gaps = 22/359 (6%)

Query: 19  LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73
           +++ G   S+++ +Y  +  +   + V  G+ V +         GQV+  R ++ IV + 
Sbjct: 1   MIMPGMEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVF 60

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130
                 +I    + F     ++  S    GR+ N +GKPIDG   +    + D+    ++
Sbjct: 61  EGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184
            V  A  R  ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR       
Sbjct: 121 PVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176

Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
            + F  V+ + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+A
Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235

Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EY +   D  VL+IL  +T +A ++REI+    E+P  RGYP  ++++L  + ER G   
Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVR 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +KG+IT +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354


>gi|282859105|ref|ZP_06268236.1| ATP synthase F1, beta subunit [Prevotella bivia JCVIHMP010]
 gi|282588135|gb|EFB93309.1| ATP synthase F1, beta subunit [Prevotella bivia JCVIHMP010]
          Length = 508

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG +SL   + +  I  + P        ++   TGI+VID+  P   G 
Sbjct: 95  GRMLNVIGQPIDGMESLNM-EGAYPIHREAPKFEELSTRKEILSTGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL--------- 210
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L         
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIKYGE 213

Query: 211 -----------------GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
                             + LKKS   +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFREAMDQGKWDLSLIDKEELKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273

Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + G
Sbjct: 274 DGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKNG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILDPLI 391

Query: 366 -SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              D  +    +   +  + E +DI  I G
Sbjct: 392 VGKDHYECAQRVKETLQHYNELQDIIAILG 421


>gi|139522628|gb|ABO77715.1| ATP synthase beta subunit [Burmeistera domingensis]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|139522676|gb|ABO77747.1| ATP synthase beta subunit [Burmeistera truncata]
 gi|139522679|gb|ABO77749.1| ATP synthase beta subunit [Burmeistera auriculata]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLAIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|157804173|ref|YP_001492722.1| F0F1 ATP synthase subunit beta [Rickettsia canadensis str. McKiel]
 gi|166222408|sp|A8F004|ATPB_RICCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157785436|gb|ABV73937.1| F0F1 ATP synthase subunit beta [Rickettsia canadensis str. McKiel]
          Length = 473

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 19/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR++N +G+ IDG   +   ++S   + K  P+   Q  E+    TGI+V+D+  P 
Sbjct: 86  ATLGRIMNVVGESIDGKGEIKSSNVSS--IYKPAPSFTNQSSERTILVTGIKVVDLLAPY 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD--- 212
             G +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +     
Sbjct: 144 TKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVI 203

Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265
           NL+     K  +V    DE P  R    L+ +TIAE F   ++G +VL  +D+I RF  +
Sbjct: 204 NLEEPEKSKVALVYGQMDEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP  
Sbjct: 264 GSEVSALLGRVPSAVGYQPTLATDMGALQERI--TSTKHGSITSVQAIYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384
            +  + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  +  ++  ++
Sbjct: 322 ATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYK 381

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 382 SLQDIIAILG 391


>gi|307343642|emb|CBJ19238.1| atpD synthase beta subunit [Micromonospora matsumotoense]
          Length = 310

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E   V++    
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFTVATEAKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|324986447|ref|YP_004276318.1| ATP synthase CF1 beta subunit [Pinus monophylla]
 gi|323522542|gb|ADX94884.1| ATP synthase CF1 beta subunit [Pinus monophylla]
          Length = 492

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|261879468|ref|ZP_06005895.1| ATP synthase F1 [Prevotella bergensis DSM 17361]
 gi|270333893|gb|EFA44679.1| ATP synthase F1 [Prevotella bergensis DSM 17361]
          Length = 508

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 159/330 (48%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG ++L   + S  I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 95  GRMMNVIGQPIDGMEALSM-EGSYPIHREAPKFDDLSTNKEILTTGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + + D L       G+
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHEGYSVFAGVGERTREGNDLLRDMLESGVIRYGE 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG-- 249
              K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFNKAMEEGKWDLSLVDREELSKSQATLVYGQMNEPPGARASVALSGLTVAEQFRDHGGK 273

Query: 250 ----DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  L ERI  +  ++G
Sbjct: 274 GGSASDIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTKRG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILDPLI 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              E  +    +   +  ++E +DI  I G
Sbjct: 392 VGKEHYECAQRVKETLQHYKELQDIIAILG 421


>gi|183206526|gb|ACC54461.1| ATP synthase beta subunit [Campanula reverchonii]
          Length = 480

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 202 GVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   ++   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQNVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|139389808|ref|YP_001123469.1| ATP synthase CF1 beta subunit [Crucihimalaya wallichii]
 gi|190358662|sp|A4QKT8|ATPB_CRUWA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286670|dbj|BAF50293.1| ATPase beta subunit [Crucihimalaya wallichii]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|139522670|gb|ABO77743.1| ATP synthase beta subunit [Burmeistera holm-nielsenii]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|19033053|gb|AAL83511.1|AF408783_1 ATP synthase beta subunit [Lamprothamnium macropogon]
          Length = 402

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTITFPIHRAAPAFTQLDTQLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|332158478|ref|YP_004423757.1| V-type ATP synthase subunit B [Pyrococcus sp. NA2]
 gi|331033941|gb|AEC51753.1| V-type ATP synthase subunit B [Pyrococcus sp. NA2]
          Length = 462

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%)

Query: 27  SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81
           S+I+ +Y  +  +   + V  G+ V +         GQV+  R NL IV +       +I
Sbjct: 6   STISKIYGPLMIVEGVKGVAYGEVVEIETETGEKRKGQVLDARENLAIVQVFEGTRDLDI 65

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138
               + F     ++  S    GR+ N +GKPIDG   +    + D+    ++ V  A  R
Sbjct: 66  RTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPINPVARAYPR 125

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191
             ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+
Sbjct: 126 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF-AVV 180

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY + + D
Sbjct: 181 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFEYD 240

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL+IL  +T +  ++REI+    E+P  RGYP  ++++L  + ER G     KG+IT 
Sbjct: 241 MHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQ 300

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 301 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 351


>gi|139522637|gb|ABO77721.1| ATP synthase beta subunit [Burmeistera multiflora]
 gi|139522640|gb|ABO77723.1| ATP synthase beta subunit [Burmeistera multiflora]
 gi|139522646|gb|ABO77727.1| ATP synthase beta subunit [Burmeistera crispiloba]
 gi|139522649|gb|ABO77729.1| ATP synthase beta subunit [Burmeistera crispiloba]
 gi|139522652|gb|ABO77731.1| ATP synthase beta subunit [Burmeistera crispiloba]
 gi|139522655|gb|ABO77733.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522658|gb|ABO77735.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522661|gb|ABO77737.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522664|gb|ABO77739.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522667|gb|ABO77741.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522673|gb|ABO77745.1| ATP synthase beta subunit [Burmeistera rubrosepala]
 gi|139522682|gb|ABO77751.1| ATP synthase beta subunit [Burmeistera oyacachensis]
 gi|139522685|gb|ABO77753.1| ATP synthase beta subunit [Burmeistera borjensis]
 gi|139522688|gb|ABO77755.1| ATP synthase beta subunit [Burmeistera refracta]
 gi|139522691|gb|ABO77757.1| ATP synthase beta subunit [Burmeistera refracta]
 gi|139522694|gb|ABO77759.1| ATP synthase beta subunit [Burmeistera refracta]
 gi|139522697|gb|ABO77761.1| ATP synthase beta subunit [Burmeistera glabrata]
 gi|139522700|gb|ABO77763.1| ATP synthase beta subunit [Burmeistera cylindrocarpa]
 gi|139522703|gb|ABO77765.1| ATP synthase beta subunit [Burmeistera cylindrocarpa]
 gi|139522709|gb|ABO77769.1| ATP synthase beta subunit [Burmeistera resupinata subsp.
           resupinata]
 gi|139522718|gb|ABO77775.1| ATP synthase beta subunit [Burmeistera succulenta]
 gi|139522721|gb|ABO77777.1| ATP synthase beta subunit [Burmeistera succulenta]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|139388917|ref|YP_001123644.1| ATP synthase CF1 beta subunit [Lepidium virginicum]
 gi|190358676|sp|A4QLB3|ATPB_LEPVR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286847|dbj|BAF50468.1| ATPase beta subunit [Lepidium virginicum]
          Length = 502

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 54  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 113

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  P   G 
Sbjct: 114 IFNVLGEPVD---NLGPVDNRTKAPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 170

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 171 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 230

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 231 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 290

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 291 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 348

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 349 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 408

Query: 390 RLIGG 394
             I G
Sbjct: 409 IAILG 413


>gi|170293985|gb|ACB13086.1| ATP synthase beta subunit [Pseudochlorella sp. CCAP 211/1A]
          Length = 367

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG P+D   ++   D  + I    P  ++       F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVLGDPVDNLGNVETKD-GLPIHRAAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD- 212
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D 
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESGVIDE 138

Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIR 267
            NL +S V  V    +E P  R    LTA+T+AEYF   SK D VLL +D+I RF  +  
Sbjct: 139 SNLSQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDISKRD-VLLFIDNIFRFVQAGS 197

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             S LD   VL+R+LA +G YP VDPL S S +  + W   EK  +   ++   + R++E
Sbjct: 256 TFSHLDATTVLSRALASKGIYPAVDPLDSTSTML-QPWIVSEKHYECAQNVKQTLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|139522712|gb|ABO77771.1| ATP synthase beta subunit [Burmeistera smaragdi]
 gi|139522715|gb|ABO77773.1| ATP synthase beta subunit [Burmeistera succulenta]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|61196976|gb|AAX39473.1| ATP synthase beta subunit [Chlorokybus atmophyticus]
          Length = 402

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG   + S   + + PPA      +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---NLGPVANKSTLPIHRDPPAFTELDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESK 153

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 154 VINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQ 213

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 214 AGSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 271

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+   ++  +   + R
Sbjct: 272 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQRVKQTLQR 330

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 331 YKELQDIIAILG 342


>gi|159106801|ref|YP_001531221.1| ATP synthase CF1 beta subunit [Cuscuta obtusiflora]
 gi|190358664|sp|A8W3J1|ATPB_CUSOB RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|158142525|gb|ABW20566.1| ATP synthase CF1 beta subunit [Cuscuta obtusiflora]
          Length = 494

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +    LS  I    PP +        F+TGI+V+D+  P   G
Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214
            ++G+F G+G+GK+ L+     +         +   VGER RE      E  E  + +  
Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 223 KLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RSLA +G YP VDPL S S +       ++  K    +   + R++E +D
Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGEQHYKTAQRVKQTLQRYKELQD 400

Query: 389 IRLIGG 394
           I  I G
Sbjct: 401 IIAILG 406


>gi|113910866|gb|ABI48165.1| ATPase beta subunit [Grimmia sp. Qiu 01090]
          Length = 472

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 163/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TG
Sbjct: 74  GPLSVPVGEATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETG 130

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 131 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 190

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
           Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +
Sbjct: 191 YMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 251 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   
Sbjct: 309 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 367

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 368 GVKQTLQRYKELQDIIAILG 387


>gi|113910798|gb|ABI48131.1| ATPase beta subunit [Lophocolea heterophylla]
          Length = 472

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 199 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|7708302|emb|CAB90078.1| ATP synthase beta subunit [Eucommia ulmoides]
          Length = 489

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 217

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 218 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       A    +   +   + R
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGAGHYNIAQQVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|291547292|emb|CBL20400.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus sp. SR1/5]
          Length = 457

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG+PID G + L +    +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SGDMLGRVFDGLGRPIDDGPEILPEERRDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  AR       D    V+ + +G    E   F+E + 
Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGKDEQFAVVFAAMGITFEESNFFVESFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               + ++V+ V  +++  + R   P  A+T AEY + + D +VL+IL  IT +A ++RE
Sbjct: 200 ETGAIDRTVLFVNLANDPAVERIATPRMALTAAEYLAFEKDMHVLVILTDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  L ER G  + + G+IT V  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKSGSITMVPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383
             I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L     R 
Sbjct: 320 GYITEGQIILSRELYRKGITPPIDVLPSLSRLKDKGIGEGKTRADHANTMNQLFAAYARG 379

Query: 384 EETRDIRLIGG 394
           +E +++  I G
Sbjct: 380 KEAKELMTILG 390


>gi|255037511|ref|YP_003088132.1| F0F1 ATP synthase subunit beta [Dyadobacter fermentans DSM 18053]
 gi|254950267|gb|ACT94967.1| ATP synthase F1, beta subunit [Dyadobacter fermentans DSM 18053]
          Length = 504

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 48/333 (14%)

Query: 103 GRVINALGKPIDG----DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR+ N +G+ IDG    D S G     + I    P         +   TGI+VID+  P 
Sbjct: 92  GRLFNVIGEAIDGLTPLDSSTG-----ISIHRAAPKFEELATATEVLFTGIKVIDLLAPY 146

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYL- 210
             G +IG+F G+G+GK+ L+       +  +  + + + VGER RE    +RE IE  + 
Sbjct: 147 VKGGKIGLFGGAGVGKTVLIQELINNIAKAYSGLSVFAGVGERTREGNDLMREMIEAGII 206

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-- 245
             G++ K S+                      V    +E P  R    L+ +T+AEYF  
Sbjct: 207 KYGEDFKHSMEEGGWDISKVDYNTLKDSQATFVFGQMNEPPGARARVALSGLTMAEYFRD 266

Query: 246 ---SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
                +G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+ ++ ERI  +  
Sbjct: 267 GDGEGQGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TST 324

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT+V +V V  D+  DP   +  + LD   VL+R ++E+G YP VDPL S SR+ +
Sbjct: 325 KRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKVSEKGIYPAVDPLDSASRILN 384

Query: 363 -KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +   A        + +++ R++E +DI  I G
Sbjct: 385 AETLGAAHYDCAQRVKNILQRYKELQDIIAILG 417


>gi|139389957|ref|YP_001123557.1| ATPase beta subunit [Draba nemorosa]
 gi|190358668|sp|A4QL26|ATPB_DRANE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286759|dbj|BAF50381.1| ATPase beta subunit [Draba nemorosa]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGSPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|21684885|emb|CAD11569.1| ATP synthase beta subunit [Lachnocaulon anceps]
          Length = 491

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGXPID---NLGPVDTSATSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  ++   +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|62958733|gb|AAY23677.1| ATP synthase beta subunit [Neohodgsonia mirabilis]
          Length = 382

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 22/310 (7%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           + GR+ N LG+P+D   +LG  D++    + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 1   YSGRIFNVLGEPVD---NLGPVDVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 57

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLG 211
             G +IG+F G+G+GK+ L+     +         +   VGER RE      E  E  + 
Sbjct: 58  RRGGKIGLFGGAGVGKTVLIMELINNIANAHGGVSVFGGVGERTREGNDLYMEMKESKVI 117

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 118 NEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 177

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 294

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 295 ELQDIIAILG 304


>gi|302418868|ref|XP_003007265.1| ATP synthase subunit beta [Verticillium albo-atrum VaMs.102]
 gi|261354867|gb|EEY17295.1| ATP synthase subunit beta [Verticillium albo-atrum VaMs.102]
          Length = 517

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 152/298 (51%), Gaps = 27/298 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PID    + K   ++ I ++ P   ++    +   TGI+V+D+  P   G 
Sbjct: 130 GRIMNVTGDPIDERGPI-KTKKTLPIHAEPPAFTDQSTTAEILVTGIKVVDLLAPYARGG 188

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218
           +IG+F G+G+GK+     L++  A++     V    VGER R  R               
Sbjct: 189 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTRRPR--------------- 232

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
             + + DE P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++   G +P
Sbjct: 233 --LRSDDEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 290

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   V
Sbjct: 291 SAVGYQPTLAIDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 348

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R ++E G YP VDPL S SR+ D      E     S++  ++  ++  +DI  I G
Sbjct: 349 LSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYDTASAVQQILQEYKSLQDIIAILG 406


>gi|139387259|ref|YP_001123380.1| ATP synthase CF1 beta subunit [Capsella bursa-pastoris]
 gi|190358274|sp|A4QKJ9|ATPB_CAPBU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286580|dbj|BAF50204.1| ATPase beta subunit [Capsella bursa-pastoris]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G  V   G+   +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGKPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E       +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|113910792|gb|ABI48128.1| ATPase beta subunit [Marsupella emarginata]
          Length = 472

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 160/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 86  GRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 143 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 202

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 203 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 262

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 263 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 320

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 321 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 379

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 380 QDIIAISG 387


>gi|15425584|emb|CAC60329.1| ATP synthase beta subunit [Levenhookia pauciflora]
          Length = 496

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  K   S+   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQSVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|170293995|gb|ACB13091.1| ATP synthase beta subunit [Chaetopeltis orbicularis]
          Length = 366

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    +  + I    P  ++       F+TGI+V+D+  P  
Sbjct: 21  LGRIFNVLGEPVD---NLGPVNAEEKLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYR 77

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 78  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIV 137

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 138 EDNLSESKVSLVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFVDNIFRFVQAGS 197

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP + +
Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPSSVA 255

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEET 386
             + LD   VL+R+LA +G YP VDPL S S +       DE    +    +   R++E 
Sbjct: 256 TFAHLDATTVLSRNLAAKGIYPAVDPLDSASIMLQPYIVGDEHYGTAQRVKITPQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|218264981|ref|ZP_03478605.1| hypothetical protein PRABACTJOHN_04315 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221649|gb|EEC94299.1| hypothetical protein PRABACTJOHN_04315 [Parabacteroides johnsonii
           DSM 18315]
          Length = 506

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PIDG   L K   S+ I  + P   +     +   TGI+VID+  P   G 
Sbjct: 94  GRLMNVTGNPIDGMTELDKKG-SLPIHREPPKFEDLTTSREVLYTGIKVIDLLEPYSKGG 152

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +++ F   + + VGER RE    +RE I+  +   
Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---S 246
           G+  KKS+                     +V    +E P  R    L+ +TIAE F   +
Sbjct: 211 GEEFKKSMEAGHWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDLA 270

Query: 247 SKGD--NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           ++G+  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +K
Sbjct: 271 AEGETKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
               E  +    +  ++ R +E +DI
Sbjct: 389 IVGKEHYETAQRVKQILQRNKELQDI 414


>gi|139522625|gb|ABO77713.1| ATP synthase beta subunit [Burmeistera sp. Muchhala 142]
          Length = 498

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|139390355|ref|YP_001122953.1| ATPase beta subunit [Aethionema cordifolium]
 gi|190358249|sp|A4QJC2|ATPB_AETCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286148|dbj|BAF49777.1| ATPase beta subunit [Aethionema cordifolium]
          Length = 490

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|89574005|gb|ABD77228.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Didelphis virginiana]
          Length = 321

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 4   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 62

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 63  NDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 122

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 123 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 180

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+
Sbjct: 181 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVA 240

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 241 RGVQKILQDYKSLQDIIAILG 261


>gi|90023606|ref|YP_529433.1| F0F1 ATP synthase subunit beta [Saccharophagus degradans 2-40]
 gi|118573741|sp|Q21DK8|ATPB_SACD2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|89953206|gb|ABD83221.1| ATP synthase F1, beta subunit [Saccharophagus degradans 2-40]
          Length = 470

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 165/339 (48%), Gaps = 16/339 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +G  E +S G  V + G    +       GR+++ LG PID    + + + +  
Sbjct: 49  VVRAIAMGGSEGVSRGLAVENTGAPINVPVGTATLGRIMDVLGNPIDEKGPINETERA-S 107

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P        E+   TGI+VID+  P   G ++G+F G+G+GK+  +     +   
Sbjct: 108 IHRKAPKYDELAASEELLATGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAT 167

Query: 188 DKVIISL---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPL 236
           +   +S+   VGER RE  +F  +     +         K  +V    +E P  R    L
Sbjct: 168 EHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVDKFDESKVAMVYGQMNEPPGNRLRVAL 227

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ER
Sbjct: 228 TGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER 287

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S
Sbjct: 288 I--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDS 345

Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            SR  D      E       +  ++ R++E +DI  I G
Sbjct: 346 SSRQLDPLIIGQEHYDTARGVQSVLQRYKELKDIIAILG 384


>gi|212224904|ref|YP_002308140.1| V-type ATP synthase subunit B [Thermococcus onnurineus NA1]
 gi|229558451|sp|B6YV15|VATB_THEON RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|212009861|gb|ACJ17243.1| archaeal/vacuolar-type H+-ATPase, subunit B [Thermococcus
           onnurineus NA1]
          Length = 465

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 192/393 (48%), Gaps = 28/393 (7%)

Query: 19  LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73
           +++ G   S+++ +Y  +  +   + V  G+ V +         GQV+  R ++ IV + 
Sbjct: 1   MLMPGMEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEARQDMAIVQVF 60

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130
                 +I    + F     ++  S    GRV N +GKPIDG   +    + D+    ++
Sbjct: 61  EGTRDLDIKTTRVRFTGETLKVPVSMDMLGRVFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184
            V  A  R  ++    TG+  ID    L  GQ++ +F+GSG+  + L +  AR       
Sbjct: 121 PVARAYPRDFIQ----TGVSAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176

Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
            + F  V+ + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+A
Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235

Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EY +   D  VL+IL  +T +A ++REI+    E+P  RGYP  ++++L  + ER G   
Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVR 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL 
Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELYRKGIYPPIDVLPSLSRLM 355

Query: 362 D----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
                K  + D+   +S    L   + E R +R
Sbjct: 356 KDGIGKGRTRDDHPQLSQ--QLYAAYAEGRSLR 386


>gi|184127841|gb|ACC67820.1| ATP synthase beta chain [Danaea nodosa]
          Length = 402

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 15  LGRIFNVLGEPVDNSGPVDVGTISP--IHKSSPAFTQLDTKLSIFETGIKVVDLLAPYRR 72

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 73  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 193 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 310 QDIIAILG 317


>gi|183206514|gb|ACC54455.1| ATP synthase beta subunit [Codonopsis kawakamii]
          Length = 478

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 201 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIITILG 389


>gi|213963371|ref|ZP_03391627.1| ATP synthase F1, beta subunit [Capnocytophaga sputigena Capno]
 gi|213954039|gb|EEB65365.1| ATP synthase F1, beta subunit [Capnocytophaga sputigena Capno]
          Length = 502

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 158/330 (47%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  +DG  +L K GD  + I  + P         +   TGI+VID+  P   G
Sbjct: 89  GRLFNVIGDGVDGLGNLPKDGDNGLPIHREAPKFEELSTTTEVLFTGIKVIDLIEPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE IE  +   G
Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMIESGIIKYG 208

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           D                        K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 209 DAFVESMEKGGWDLSKVDRKVLKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 268

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G
Sbjct: 269 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKHG 326

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 386

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +  +    +  L+  +++ +DI  I G
Sbjct: 387 LGKEHYECAQRVKELLQHYKQLQDIIAILG 416


>gi|14521959|ref|NP_127436.1| V-type ATP synthase subunit B [Pyrococcus abyssi GE5]
 gi|12585510|sp|Q9UXU8|VATB_PYRAB RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|5459179|emb|CAB50665.1| atpB archaeal/vacuolar-type H+-transporting ATP synthase, subunit B
           [Pyrococcus abyssi GE5]
          Length = 465

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 22/351 (6%)

Query: 27  SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81
           S+I+ +Y  +  +   + V  G+ V +         GQV+  R NL IV +       ++
Sbjct: 9   STISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDV 68

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138
               + F     ++  S    GR+ N +GKPIDG   +    + D+    ++ V  A  R
Sbjct: 69  KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191
             ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+
Sbjct: 129 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF-AVV 183

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY +   D
Sbjct: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL+IL  +T +  ++REI+    E+P  RGYP  ++++L  + ER G    +KG+IT 
Sbjct: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354


>gi|260584736|ref|ZP_05852482.1| V-type sodium ATPase, B subunit [Granulicatella elegans ATCC
           700633]
 gi|260157759|gb|EEW92829.1| V-type sodium ATPase, B subunit [Granulicatella elegans ATCC
           700633]
          Length = 458

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 163/317 (51%), Gaps = 15/317 (4%)

Query: 60  GQVIRINLDI----VYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+ ++ D     ++  P GI   I    + F      ++ S    GR+ + +G  IDG
Sbjct: 42  GQVLEVHEDKAMVQIFEGPSGIN--IRDSKVRFKGKPLSLNVSEDMVGRIFDGMGNVIDG 99

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   + S+++  +    ++R   ++  +TGI  ID    L  GQ++ VF+GSG+   
Sbjct: 100 GPEL-LPEASLDVNGQAINPVSRDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHK 158

Query: 176 TLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
            L +  AR      SD    V+ + +G    E   F+ED+     + +SV+ +  +++  
Sbjct: 159 ELAAQIARQATVLNSDEKFAVVFAAMGITFDEAEYFMEDFRKTGAIDRSVMFINLANDPA 218

Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R   P  A+T AEY + + D +VL+I+  +T +  ++REI+    E+P  RGYP  ++
Sbjct: 219 IERIATPKIALTTAEYLAYEKDMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLY 278

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + L  L ER G     KG++T +  + +  D+   PI D    I +G I+L+R+L ++G 
Sbjct: 279 TNLSTLYERAGRLVGRKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILDRALDKQGI 338

Query: 348 YPPVDPLASVSRLADKA 364
            PP++ L S+SRL DK 
Sbjct: 339 QPPINVLPSLSRLKDKG 355


>gi|113910780|gb|ABI48122.1| ATPase beta subunit [Lepidozia reptans]
          Length = 472

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 199 VIDEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|203033|gb|AAA40778.1| F1-ATPase beta subunit [Rattus norvegicus]
          Length = 358

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 14  TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 72

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     + D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 73  NDLYHEMIESGVIKVKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 132

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 133 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 190

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 191 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 250

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++H ++  +DI  I G
Sbjct: 251 RGVQKILHVYKSLQDIIAILG 271


>gi|160940090|ref|ZP_02087435.1| hypothetical protein CLOBOL_04979 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436670|gb|EDP14437.1| hypothetical protein CLOBOL_04979 [Clostridium bolteae ATCC
           BAA-613]
          Length = 457

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 159/311 (51%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S     R+ + +GKPIDG  D L +  + +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SEDMLSRMFDGMGKPIDGGPDILPEKRMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F+E + 
Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDESFAVVFAAMGITFEEANFFMESFR 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               + +SV+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A S+RE
Sbjct: 200 ETGAIDRSVMFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADSLRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   PI D  
Sbjct: 260 ISAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383
             I +G I+L+R L  +   PP+D L S+SRL DK        AD   +++ L     R 
Sbjct: 320 GYITEGQIILSRELYRKNVTPPIDVLPSLSRLKDKGIGEGKTRADHADVMNQLFAAYARG 379

Query: 384 EETRDIRLIGG 394
           ++ +++ +I G
Sbjct: 380 KDAKELMIILG 390


>gi|183206508|gb|ACC54452.1| ATP synthase beta subunit [Codonopsis dicentrifolia]
          Length = 478

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 208 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIITILG 396


>gi|198274977|ref|ZP_03207509.1| hypothetical protein BACPLE_01136 [Bacteroides plebeius DSM 17135]
 gi|198272424|gb|EDY96693.1| hypothetical protein BACPLE_01136 [Bacteroides plebeius DSM 17135]
          Length = 509

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N +G  IDG   L K D    I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 96  GRVMNVVGDTIDGMKELDKTD-GFPIHREPPKFEDLATTQEVLFTGIKVIDLLEPYLKGG 154

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 155 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 212

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248
           GD   KS+                     +V    +E P  R+   L+ +T+AE F  + 
Sbjct: 213 GDEFLKSMEEGNWDLSKVDYNEVEKSQVAMVFGQMNEPPGARQSVALSGLTLAESFRDRQ 272

Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            GDN    +L  +D+I RF  +  E++   G +P A GY  ++ +E+ ++ ERI  +  +
Sbjct: 273 TGDNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 330

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 331 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLDSTSRILDP 390

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  +    +  ++ R +E +DI
Sbjct: 391 LIVGKEHYETAQRVKQILQRNKELQDI 417


>gi|61196962|gb|AAX39466.1| ATP synthase beta subunit [Lamprothamnium heraldii]
          Length = 402

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTITFPIHRAAPAFTQLDTQLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|119944239|ref|YP_941919.1| F0F1 ATP synthase subunit beta [Psychromonas ingrahamii 37]
 gi|190358213|sp|A1SS55|ATPB1_PSYIN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|119862843|gb|ABM02320.1| ATP synthase F1, beta subunit [Psychromonas ingrahamii 37]
          Length = 485

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 151/293 (51%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           R+ +  G  ID    L   ++    + + PP ++++  +   F TGI+VID+  PL  G 
Sbjct: 94  RMFDVFGNTIDNGPLLN--NVQWRSVHRAPPTLSQRSTQSEIFVTGIKVIDVLVPLERGG 151

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ LL+    +       IS+   +GER RE  E + E      L   V
Sbjct: 152 KAGLFGGAGVGKTVLLTEMIHNMVSHHNGISIFCGIGERSREGEELYREMKEAGVLPNMV 211

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  EI+   G++P
Sbjct: 212 MIFGQMNEPPGARFRVGHAALTMAEYFRDDESRDVLLLIDNIFRFIQAGSEISGLMGQMP 271

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ SEL  L ERI  +  E G IT++ +V V  D+  DP A    S L   IV
Sbjct: 272 SRLGYQPTMGSELSSLEERI--ANTEDGAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP +DPL S S++A      +    L   +   + ++++ +DI
Sbjct: 330 LSRQRASEGLYPSIDPLQSSSKMATAGIIGERHYNLAQEVRRTLAKYDDLKDI 382


>gi|33863718|ref|NP_895278.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9313]
 gi|81835692|sp|Q7V5U2|ATPB_PROMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33635301|emb|CAE21626.1| ATP synthase beta subunit, central region [Prochlorococcus marinus
           str. MIT 9313]
          Length = 488

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P     +     F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVTT-DATAPIHRPSPKLTELETKPTVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 SDDLSKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  +   S+   + R++E 
Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|255994419|ref|ZP_05427554.1| V-type sodium ATPase, B subunit [Eubacterium saphenum ATCC 49989]
 gi|255993132|gb|EEU03221.1| V-type sodium ATPase, B subunit [Eubacterium saphenum ATCC 49989]
          Length = 457

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 162/316 (51%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   +        I+L D    F      +  S    GRV + LG+PID   
Sbjct: 42  GKVLEIDADRAMVQVFEGSSGINLPDTTVRFLGHPLELGVSEDMIGRVFDGLGRPIDDGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D+ M+I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KLVP-DMKMDINGAPINPVSRDYPSEFIQTGISCIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR       ++ F  V+ + +G    E + F+++      + +SV+ +  +D+  I
Sbjct: 161 AAQIARQAQVLGQNEKF-MVVFAAMGITFEESKFFVDNLTETGAIDRSVLFINLADDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEYF+  KG  VL+I+  IT +A ++RE++    E+P  RGYP  +++
Sbjct: 220 ERIATPKMALTCAEYFAFEKGMQVLVIMTDITNYADALREVSAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G    + G+IT +  + +  D+   PI D    I +G I+L+R L ++G  
Sbjct: 280 DLAGMYERAGKISGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELHKKGNN 339

Query: 349 PPVDPLASVSRLADKA 364
           PP++ + S+SRL DK 
Sbjct: 340 PPINIVPSLSRLKDKG 355


>gi|307343660|emb|CBJ19247.1| atpD synthase beta subunit [Micromonospora rosaria]
          Length = 302

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGDLQERITSVRGQA--ITSLQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|139522643|gb|ABO77725.1| ATP synthase beta subunit [Burmeistera cyclostigmata]
          Length = 498

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   S+   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|113910806|gb|ABI48135.1| ATPase beta subunit [Odontoschisma denudatum]
          Length = 454

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|293369732|ref|ZP_06616308.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CMC 3f]
 gi|292635154|gb|EFF53670.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CMC 3f]
          Length = 510

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 52/330 (15%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N +G  IDG   L  KG  S+    + PP   +   V++   TGI+VID+  P   
Sbjct: 93  GRLMNVVGDSIDGMKGLDRKGAYSIH---RDPPKFEDLTTVQEVLFTGIKVIDLLEPYAK 149

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE---- 207
           G +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE    
Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVI 207

Query: 208 --------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF 245
                               DY  + L+KS V  +    +E P  R    L+ +T+AE F
Sbjct: 208 RYGEAFKEGMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESF 265

Query: 246 SSKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
              G      ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +
Sbjct: 266 RDAGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--T 323

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              KG+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+
Sbjct: 324 STRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRI 383

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            D      E   +   +  ++ R +E +DI
Sbjct: 384 LDPHIVGQEHYDVAQQVKQILQRNKELQDI 413


>gi|164566065|gb|ABY61175.1| ATP synthase beta subunit [Danaea cartilaginea]
 gi|164566073|gb|ABY61179.1| ATP synthase beta subunit [Danaea erecta]
 gi|164566099|gb|ABY61192.1| ATP synthase beta subunit [Danaea kalevala]
 gi|164566105|gb|ABY61195.1| ATP synthase beta subunit [Danaea longicaudata]
          Length = 394

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|124022212|ref|YP_001016519.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9303]
 gi|123962498|gb|ABM77254.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9303]
          Length = 532

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P     +     F+TGI+VID+  P  
Sbjct: 141 ATLGRIFNVLGEPVDEQGPVTT-DATAPIHRPAPKLTELETKPTVFETGIKVIDLLAPYR 199

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 200 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 259

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 260 SDDLSKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 319

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 320 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 377

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R+LA +G YP VDPL S S +   +   DE  +   S+   + R++E 
Sbjct: 378 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKEL 437

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 438 QDIIAILG 445


>gi|19033097|gb|AAL83533.1|AF408805_1 ATP synthase beta subunit [Chlorokybus atmophyticus]
          Length = 402

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG   + S   + + PPA      +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---NLGPVANKSTLPIHRDPPAFTELDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESK 153

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 154 VINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQ 213

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 214 AGSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 271

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+   ++  +   + R
Sbjct: 272 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQRVKQTLQR 330

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 331 YKELQDIIAILG 342


>gi|164566063|gb|ABY61174.1| ATP synthase beta subunit [Danaea carillensis]
 gi|164566067|gb|ABY61176.1| ATP synthase beta subunit [Danaea crispa]
 gi|164566093|gb|ABY61189.1| ATP synthase beta subunit [Danaea jenmanii]
 gi|164566095|gb|ABY61190.1| ATP synthase beta subunit [Danaea jenmanii]
 gi|164566097|gb|ABY61191.1| ATP synthase beta subunit [Danaea jenmanii]
 gi|164566107|gb|ABY61196.1| ATP synthase beta subunit [Danaea mazeana]
 gi|164566147|gb|ABY61216.1| ATP synthase beta subunit [Danaea urbanii]
          Length = 394

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|15674363|ref|NP_268537.1| V-type ATP synthase subunit B [Streptococcus pyogenes M1 GAS]
 gi|21909657|ref|NP_663925.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS315]
 gi|28895035|ref|NP_801385.1| V-type ATP synthase subunit B [Streptococcus pyogenes SSI-1]
 gi|50913525|ref|YP_059497.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS10394]
 gi|71909946|ref|YP_281496.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS5005]
 gi|94987765|ref|YP_595866.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS9429]
 gi|94989643|ref|YP_597743.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS10270]
 gi|94991634|ref|YP_599733.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS2096]
 gi|94993533|ref|YP_601631.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS10750]
 gi|139473008|ref|YP_001127723.1| V-type ATP synthase subunit B [Streptococcus pyogenes str.
           Manfredo]
 gi|306828172|ref|ZP_07461435.1| exopolyphosphatase [Streptococcus pyogenes ATCC 10782]
 gi|73920418|sp|Q7CFI7|VATB_STRP3 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|73920419|sp|Q5XE49|VATB_STRP6 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|73920439|sp|Q9A1Q2|VATB_STRP1 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|122987050|sp|Q1JIX4|VATB_STRPD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|123080270|sp|Q1JDW9|VATB_STRPB RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|123080440|sp|Q1JNS7|VATB_STRPC RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|123257658|sp|Q1J8S4|VATB_STRPF RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|167016638|sp|A2RC98|VATB_STRPG RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|13621450|gb|AAK33258.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes M1
           GAS]
 gi|21903839|gb|AAM78728.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes
           MGAS315]
 gi|28810280|dbj|BAC63218.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes
           SSI-1]
 gi|50902599|gb|AAT86314.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes
           MGAS10394]
 gi|71852728|gb|AAZ50751.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes
           MGAS5005]
 gi|94541273|gb|ABF31322.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes
           MGAS9429]
 gi|94543151|gb|ABF33199.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes
           MGAS10270]
 gi|94545142|gb|ABF35189.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes
           MGAS2096]
 gi|94547041|gb|ABF37087.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes
           MGAS10750]
 gi|134271254|emb|CAM29470.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes str.
           Manfredo]
 gi|304429709|gb|EFM32755.1| exopolyphosphatase [Streptococcus pyogenes ATCC 10782]
          Length = 471

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L D  +H G+     GQV+ +  D  +V +     G  ++   + F      ++ S
Sbjct: 27  HYNELVDITLHNGERRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ + +G+PIDG   L   +  ++I  +    + R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFDGMGQPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY +  KG +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L++ L + G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357


>gi|160884429|ref|ZP_02065432.1| hypothetical protein BACOVA_02413 [Bacteroides ovatus ATCC 8483]
 gi|299146013|ref|ZP_07039081.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_23]
 gi|156110168|gb|EDO11913.1| hypothetical protein BACOVA_02413 [Bacteroides ovatus ATCC 8483]
 gi|298516504|gb|EFI40385.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_23]
          Length = 506

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 52/330 (15%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N +G  IDG   L  KG  S+    + PP   +   V++   TGI+VID+  P   
Sbjct: 93  GRLMNVVGDSIDGMKGLDRKGAYSIH---RDPPKFEDLTTVQEVLFTGIKVIDLLEPYAK 149

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE---- 207
           G +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE    
Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVI 207

Query: 208 --------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF 245
                               DY  + L+KS V  +    +E P  R    L+ +T+AE F
Sbjct: 208 RYGEAFKEGMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESF 265

Query: 246 SSKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
              G      ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +
Sbjct: 266 RDAGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--T 323

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              KG+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+
Sbjct: 324 STRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRI 383

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            D      E   +   +  ++ R +E +DI
Sbjct: 384 LDPHIVGQEHYDVAQQVKQILQRNKELQDI 413


>gi|124302913|ref|YP_001023708.1| ATP synthase CF1 beta subunit [Angiopteris evecta]
 gi|190358253|sp|A2T340|ATPB_ANGEV RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|110628311|gb|ABG79607.1| ATP synthase CF1 beta subunit [Angiopteris evecta]
          Length = 492

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 105 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 399

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 400 QDIIAILG 407


>gi|156618911|ref|YP_001430047.1| ATP synthase CF1 beta subunit [Cuscuta gronovii]
 gi|75330427|sp|Q8MBG3|ATPB_CUSGR RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633451|gb|AAM52200.1| ATP synthase beta subunit [Cuscuta gronovii]
 gi|156555949|emb|CAM98333.1| ATP synthase CF1 beta chain [Cuscuta gronovii]
          Length = 494

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +    LS  I    PP +        F+TGI+V+D+  P   G
Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214
            ++G+F G+G+GK+ L+     +         +   VGER RE      E  E  + +  
Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 223 KLDESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RSLA +G YP VDPL S S +       ++  K    +   + R++E +D
Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGEQHYKTAQRVKQTLQRYKELQD 400

Query: 389 IRLIGG 394
           I  I G
Sbjct: 401 IIAILG 406


>gi|46909271|gb|AAT06153.1| ATP synthase beta subunit [Monosiga brevicollis]
          Length = 426

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 20/309 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N +G+PID    + K D    I ++ P   + +   +  +TGI+V+D+  P  
Sbjct: 62  ATLGRIMNVIGEPIDERGPI-KADKYAPIHAEAPELEDMRPEAEILETGIKVVDLLAPYA 120

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210
            G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +     
Sbjct: 121 KGGKIGLFGGAGVGKTVLIMELINNVAKAHSGFSVFAG-VGERTREGNDLYHEMIEGGVI 179

Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
              GD+  K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I RF     
Sbjct: 180 QLEGDS--KVALVYGQMNEPPGARARVALTGLTVAESFRDQGRDVLLFIDNIFRFTQDGS 237

Query: 268 EI-ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           E+ A   G +P A GY  ++ +++  + ERI  +    G+IT+V +V V  D+  DP   
Sbjct: 238 EVSALFLGRIPSAVGYQPTLATDMGAMQERI--TTTTVGSITSVQAVYVPADDLTDPAPA 295

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R +AE G YP VDPL S SR+ D +   +   K    +  ++  ++ 
Sbjct: 296 TTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDVSVVGERHYKTARDVQKILQDYKS 355

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 356 LQDIIAILG 364


>gi|307343664|emb|CBJ19249.1| atpD synthase beta subunit [Micromonospora sagamiensis]
          Length = 309

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKRQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|164566049|gb|ABY61167.1| ATP synthase beta subunit [Danaea acuminata]
 gi|164566075|gb|ABY61180.1| ATP synthase beta subunit [Danaea falcata]
          Length = 394

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|324986519|ref|YP_004276389.1| ATP synthase CF1 beta subunit [Pinus nelsonii]
 gi|323522707|gb|ADX94955.1| ATP synthase CF1 beta subunit [Pinus nelsonii]
          Length = 492

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARIKSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|12585392|sp|O06505|VATB_DESSY RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
          Length = 463

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%)

Query: 27  SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81
           S+++ +Y  +  +   + V  G+ V +         GQV+  R NL IV +       ++
Sbjct: 7   STVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDV 66

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138
               + F     ++  S    GR+ N +GKPIDG   +    + D+    ++ V  A  R
Sbjct: 67  KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 126

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191
             ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+
Sbjct: 127 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVV 181

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY +   D
Sbjct: 182 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 241

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL+IL  +T +A ++REI+    E+P  RGYP  ++++L  + ER G    +KG+IT 
Sbjct: 242 MQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERGGRVRGKKGSITQ 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 302 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 352


>gi|307343684|emb|CBJ19259.1| atpD synthase beta subunit [Micromonospora sp. GUI15]
          Length = 302

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTDSGVINKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKPEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +   E  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|183206500|gb|ACC54448.1| ATP synthase beta subunit [Canarina canariensis]
          Length = 480

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 203 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIISDEHYETAQSVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIITILG 391


>gi|62902871|gb|AAY19350.1| ATP synthase beta subunit [Larrea tridentata]
          Length = 474

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKETLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|7525040|ref|NP_051066.1| ATP synthase CF1 beta subunit [Arabidopsis thaliana]
 gi|6686269|sp|P19366|ATPB_ARATH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5881701|dbj|BAA84392.1| ATPase beta subunit [Arabidopsis thaliana]
          Length = 498

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|288925053|ref|ZP_06418989.1| ATP synthase F1, beta subunit [Prevotella buccae D17]
 gi|315608092|ref|ZP_07883085.1| ATP synthase F1 sector beta subunit [Prevotella buccae ATCC 33574]
 gi|288338243|gb|EFC76593.1| ATP synthase F1, beta subunit [Prevotella buccae D17]
 gi|315250561|gb|EFU30557.1| ATP synthase F1 sector beta subunit [Prevotella buccae ATCC 33574]
          Length = 508

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 159/340 (46%), Gaps = 41/340 (12%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR++N +G+PIDG   L   + +  I  + P        ++   TGI+VI
Sbjct: 85  IRMPAGEQIKGRMMNVIGQPIDGMKQLDM-EGAYPIHREAPKFDELSTHKEMLATGIKVI 143

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE  + I D 
Sbjct: 144 DLLEPYMKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDM 203

Query: 210 L-------GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTI 241
           L       G+  +K++                     +V    +E P  R    L+ +T+
Sbjct: 204 LESGVIKYGEKFRKAMDEGKWDLSLVDPEELSKSQATLVYGQMNEPPGARASVALSGLTV 263

Query: 242 AEYFSSKGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           AE F   G       +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + E
Sbjct: 264 AEEFRDHGGKDGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGSMQE 323

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT+V +V V  D+  DP   +  + LD    L+R +AE G YP VDPL 
Sbjct: 324 RI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKIAELGIYPAVDPLG 381

Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           S SR+ D      E  +    +  L+ R+ E +DI  I G
Sbjct: 382 STSRILDPLIVGKEHYECAQRVKQLLQRYNELQDIIAILG 421


>gi|16416734|gb|AAL18391.1|AF313543_1 ATP synthase beta chain [Angiopteris lygodiifolia]
 gi|149384675|gb|ABR25146.1| ATP synthase beta chain [Angiopteris evecta]
 gi|164566045|gb|ABY61165.1| ATP synthase beta subunit [Archangiopteris itoi]
 gi|164566151|gb|ABY61218.1| ATP synthase beta subunit [Angiopteris smithii]
          Length = 394

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|307343644|emb|CBJ19239.1| atpD synthase beta subunit [Micromonospora mirobrigensis]
          Length = 302

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E   V++ +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|300777877|ref|ZP_07087735.1| ATP synthase F1 sector beta subunit [Chryseobacterium gleum ATCC
           35910]
 gi|300503387|gb|EFK34527.1| ATP synthase F1 sector beta subunit [Chryseobacterium gleum ATCC
           35910]
          Length = 502

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 40/329 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G  IDG   + K D  + I    P         +   TGI+VID+  P   G 
Sbjct: 91  GRLFNVVGDAIDGLQDISK-DGGLPIHRPAPKFDQLSTSAEVLFTGIKVIDLVEPYAKGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   GD
Sbjct: 150 KIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYGD 209

Query: 213 NL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-----S 246
           +                       K+  V    +E P  R    L+ +T+AEY+     S
Sbjct: 210 DFMHSMENGGWDLSKVDLEAMKDSKAAFVFGQMNEPPGARARVALSGLTLAEYYRDGGES 269

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + G+
Sbjct: 270 GQGRDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKNGS 327

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           IT+V +V V  D+  DP   +  + LD   VL+R +A  G YP VDPLAS SR LA +  
Sbjct: 328 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLDRKIASLGIYPAVDPLASTSRILAPEVI 387

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             D       +  ++ R++  +DI  I G
Sbjct: 388 GHDHYNCAQRVKEILQRYKALQDIIAILG 416


>gi|171704669|sp|A1RX20|VATB_THEPD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
          Length = 460

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 178/357 (49%), Gaps = 17/357 (4%)

Query: 53  GKNS-DNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALG 110
           GK+S +  G+V+  ++    +  +G  E +    L+ F    F+I  S    GRV N   
Sbjct: 36  GKDSRERFGRVLETSIGQAVVQVLGDREGLETDTLLKFTGSTFKIRVSEDVIGRVFNGRF 95

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PIDG   +  G+L  EI  +    ++R+      +TG+  ID    +  GQ++ +F+ S
Sbjct: 96  EPIDGLPPILSGELR-EITGEPINPISREYPHDFIQTGVSAIDGLFSMVRGQKLPIFSVS 154

Query: 171 GIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
           G+  + L +  AR            V+ + +G R  E   F+E +     +++ V V+  
Sbjct: 155 GLPHNLLAAQVARQATVRGEGEQFAVVFAGIGLRKTEAEFFLEQFRETGAIERLVAVLNM 214

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGY 282
           +D+  + R M P  A+T+AEY +   D +VL+I+  +T +  ++RE+++  GE+P   GY
Sbjct: 215 ADDPAVERLMTPRIALTVAEYLAFDLDMHVLVIMSDMTNYCEALREVSSARGEIPGRLGY 274

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  ++S+L  + ER G  + +KG+IT    + + G +   PI D    I +G I L++ +
Sbjct: 275 PGYMYSDLATIYERAGVIKGKKGSITLFPILTMPGGDLRHPIPDLTGYITEGQIFLSQEM 334

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI-RLIG 393
             +G YPP++ L S+SRL            D + L   L     R  + RD+ R+IG
Sbjct: 335 YAQGIYPPINILPSLSRLMKSGIGPGKTREDHRYLADQLYDAYSRGVKARDLARIIG 391


>gi|164566115|gb|ABY61200.1| ATP synthase beta subunit [Danaea nodosa]
 gi|164566117|gb|ABY61201.1| ATP synthase beta subunit [Danaea nodosa]
 gi|164566119|gb|ABY61202.1| ATP synthase beta subunit [Danaea nodosa]
 gi|164566121|gb|ABY61203.1| ATP synthase beta subunit [Danaea nodosa]
 gi|164566123|gb|ABY61204.1| ATP synthase beta subunit [Danaea nodosa]
          Length = 394

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSSPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|307343630|emb|CBJ19232.1| atpD synthase beta subunit [Micromonospora echinospora]
          Length = 302

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAISVPADH 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ S +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|21684923|emb|CAD11588.1| ATP synthase beta subunit [Xyris involucrata]
          Length = 482

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    I    P  +  +   + F+TGI+V+D+  P  
Sbjct: 90  LGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPTFIELETRLEIFETGIKVVDLLAPYR 146

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVIN 206

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  
Sbjct: 207 EKNLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGS 266

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 267 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 324

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E 
Sbjct: 325 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKETLQRYKEL 384

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 385 QDIIAILG 392


>gi|87082848|gb|ABD18900.1| NtpB [Caloramator fervidus]
          Length = 461

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 161/318 (50%), Gaps = 17/318 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ IN D  ++ +     G  +    + F      +  S    GRV + LG+P DG  
Sbjct: 42  GKVLEINGDKALIQLFESSAGINLQGSKVRFLGKTLELGVSIDMLGRVFDGLGRPKDGGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +    K D++   ++ V     R    +  +TGI  ID    L  GQ++ +F+GSG+  
Sbjct: 102 KIIPEKKLDINGNPLNPVA----RDYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPH 157

Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           S L +  AR      +D    V+ + +G    E   FI D+     + ++V+ +  +++ 
Sbjct: 158 SRLAAQIARQARVLNADSKFAVVFAAMGITFEEAEFFISDFKKTGAIDRAVLFINLANDP 217

Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            I R   P  A+T AE+ +  KG +VL+I+  +T +  ++REI+    E+P  RGYP  +
Sbjct: 218 AIERIATPRMALTTAEFLAFEKGMHVLVIMTDMTNYCEALREISAARKEVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  L ER G  + ++G+IT +  + +  D+   PI D    I +G I+L+R L  +G
Sbjct: 278 YTDLSTLYERAGKIKGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYRKG 337

Query: 347 RYPPVDPLASVSRLADKA 364
             PP+D L S+SRL DK 
Sbjct: 338 VNPPIDVLPSLSRLKDKG 355


>gi|78186925|ref|YP_374968.1| F0F1 ATP synthase subunit beta [Chlorobium luteolum DSM 273]
 gi|123743669|sp|Q3B406|ATPB2_PELLD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|78166827|gb|ABB23925.1| ATP synthase F1, beta subunit [Chlorobium luteolum DSM 273]
          Length = 468

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 154/293 (52%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           R+ +  G+PID        D+    + ++PP + R+      F+TGI++ID+ +PL  G 
Sbjct: 92  RMFDVFGRPID--RGAPPPDVEWRGVHRMPPPLGRRSTRSEVFETGIKIIDLLSPLERGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKSVV 219
           + G+F G+G+GK+ LL+    +       +S+   +GER RE  E   D     +  S+V
Sbjct: 150 KAGLFGGAGVGKTVLLTEMIHNMVHRHHGVSIFCGIGERCREGEELYRDMRDAGVLDSMV 209

Query: 220 VV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    L A+T+AEYF   + ++VLL++D+I RF  +  EI+   G++P
Sbjct: 210 MVFGQMNEPPGSRFRVGLAALTMAEYFRDDQHEDVLLLIDNIFRFIQAGSEISGMMGQMP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL +L ERI  +    G IT++ +V V  D+  DP A    S L   + 
Sbjct: 270 SRLGYQPTMGTELSQLEERI--ANTGTGAITSIQAVYVPADDFTDPAAVHTFSHLSASLT 327

Query: 338 LNRSLAEEGRYPPVDPLASVSRL-ADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           L+R  A EG +P +DPL S S++ A          L   +  ++ ++ E +DI
Sbjct: 328 LSRKRAGEGFFPAIDPLQSGSKMTAPSIIGRRHYDLSRQIRRVLAQYSELKDI 380


>gi|184127875|gb|ACC67837.1| ATP synthase beta chain [Archangiopteris itoi]
          Length = 399

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 12  LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 69

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 70  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 129

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 130 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 189

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 190 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 247

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 248 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 306

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 307 QDIIAILG 314


>gi|164566113|gb|ABY61199.1| ATP synthase beta subunit [Danaea nodosa]
          Length = 394

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|154496323|ref|ZP_02035019.1| hypothetical protein BACCAP_00611 [Bacteroides capillosus ATCC
           29799]
 gi|150274406|gb|EDN01483.1| hypothetical protein BACCAP_00611 [Bacteroides capillosus ATCC
           29799]
          Length = 459

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 11/283 (3%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV N +G+PIDG  + L +    +  ++  P A  R    +  +TGI  ID   
Sbjct: 82  SGDMLGRVFNGMGRPIDGGPEILAEERRDINGLAMNPAA--RDYPNEFIQTGISTIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-SDCFD-----KVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+GSG+  + L +  AR +   D      V+ + +G    E   F+E++ 
Sbjct: 140 TLVRGQKLPIFSGSGLPHAALAAQIARQAKVLDGASNFAVVFAAIGITFEESNFFVEEFR 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               + ++V+    +++  + R   P  A+T AEY +  KG +VL+IL  IT +A ++RE
Sbjct: 200 RTGAIDRTVLFTNLANDPAVERISTPRMALTAAEYLAFEKGMHVLVILTDITNYAEALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  + ER G      G+IT +  + +  D+   PI D  
Sbjct: 260 VSAAKKEVPGRRGYPGYLYTDLATMYERAGRRLGCPGSITMIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
             I +G I+L+R L  +G  PPVD L S+SRL DK   A + +
Sbjct: 320 GYITEGQIILSRELFRKGIIPPVDVLPSLSRLKDKGIGAGKTR 362


>gi|61968331|gb|AAX57092.1| ATP synthase beta subunit [Drypetes madagascariensis]
          Length = 478

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRITSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
              G+N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 209 VINGENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|302567347|gb|ADL41372.1| ATP synthase B subunit [Stichococcus sp. CU336]
          Length = 366

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D    + I    P  ++       F+TGI+V+D+  P
Sbjct: 19  ATLGRIFNVLGEPVD---NLGPVDNKEGLPIHRSAPAFVDLDTKLAIFETGIKVVDLLAP 75

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 76  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 135

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 136 IDQDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 195

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+ +L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 196 GSEVSALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 253

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R+
Sbjct: 254 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYDCAQNVKETLQRY 312

Query: 384 EETRDIRLIGG 394
            E +DI  I G
Sbjct: 313 NELQDIIAILG 323


>gi|332665057|ref|YP_004447845.1| ATP synthase subunit beta [Haliscomenobacter hydrossis DSM 1100]
 gi|332333871|gb|AEE50972.1| ATP synthase subunit beta [Haliscomenobacter hydrossis DSM 1100]
          Length = 501

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 164/333 (49%), Gaps = 46/333 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N +G+ IDG   + + D S    + + PPA       K    TGI+VID+  P   
Sbjct: 88  GRLFNVVGQAIDG---IPQPDGSQVYPIHRKPPAYEDLSTNKEILYTGIKVIDLIEPYMK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIE------ 207
           G +IG+F G+G+GK+ L+       +  +D + + + VGER RE    +RE +E      
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKGYDGISVFAGVGERTREGNDLMREMLEAGIINY 204

Query: 208 -------------DYLG---DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFS--- 246
                        D  G   D+LK  K+  V    +E P  R    L+ +TIAEY+    
Sbjct: 205 GEKFMHSMEEGGWDLSGVTVDDLKQSKATFVFGQMNEPPGARARVALSGLTIAEYYRDGD 264

Query: 247 ----SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
               + G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  
Sbjct: 265 LSDPTGGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TST 322

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT+V +V V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ D
Sbjct: 323 RRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLDSTSRILD 382

Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                DE       + +L+ R+ E +DI  I G
Sbjct: 383 PRIIGDEHYNTAQRVKNLLQRYNELQDIIAILG 415


>gi|111283716|gb|ABH09208.1| ATPase beta subunit [Triandrophyllum subtrifidum]
          Length = 470

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|158602259|gb|ABW74596.1| ATP synthase beta subunit [Ceratocephala pungens]
          Length = 497

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G  V + G    +       GR
Sbjct: 49  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVINTGAPLSVPVGGATLGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 109 IFNFLGEPVDNLGPVXTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 167

Query: 165 GVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------EDYL 210
           G+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E+ L
Sbjct: 168 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEENL 226

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
           G++  K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  +  E+
Sbjct: 227 GES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEV 284

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 285 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 342

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +D
Sbjct: 343 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQD 402

Query: 389 IRLIGG 394
           I  I G
Sbjct: 403 IIAILG 408


>gi|184127871|gb|ACC67835.1| ATP synthase beta chain [Angiopteris evecta]
          Length = 402

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 15  LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 72

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 73  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 193 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 310 QDIIAILG 317


>gi|119024938|gb|ABL59887.1| ATP synthase beta subunit [Chlainomonas kolii]
          Length = 366

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 19  ATLGRIFNVLGEPVD---NLGPVKAEATLPIHRSAPAFVDLDTRLSIFETGIKVVDLLAP 75

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 76  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 135

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AE+F      +VL  +D+I RF 
Sbjct: 136 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEFFRDFNKQDVLFFIDNIFRFV 193

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 194 QAGAEVSALLGRMPSAVGYQPTLASEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDP 251

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
                 S LD   VL+R LA +G YP V PL S S +  + +   EK   +   +   + 
Sbjct: 252 APAVTFSHLDATTVLSRDLASKGIYPAVSPLESTSTML-QPFIVGEKHYNVAQDVKKTLQ 310

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 311 RYKELQDIIAILG 323


>gi|113910856|gb|ABI48160.1| ATPase beta subunit [Ceratodon purpureus]
          Length = 456

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|193237707|dbj|BAG50117.1| ATP synthase beta subunit [Takakia lepidozioides]
 gi|193237729|dbj|BAG50133.1| ATP synthase beta subunit [Takakia lepidozioides]
          Length = 492

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 220 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|183206620|gb|ACC54508.1| ATP synthase beta subunit [Heterocodon rariflorum]
          Length = 484

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 205

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 206 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 265

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 266 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 323

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 324 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 383

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 384 YKELQDIITILG 395


>gi|113910874|gb|ABI48169.1| ATPase beta subunit [Leptobryum pyriforme]
 gi|113910876|gb|ABI48170.1| ATPase beta subunit [Bartramia pomiformis]
          Length = 472

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|113910788|gb|ABI48126.1| ATPase beta subunit [Solenostoma hyalinum]
          Length = 472

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTSFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQXNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|113910864|gb|ABI48164.1| ATPase beta subunit [Hymenostylium recurvirostre]
          Length = 472

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|20467373|gb|AAL27817.1| ATPase beta subunit [Ephedra intermedia]
          Length = 435

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 73  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 129

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 130 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 189

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 190 EKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 249

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 250 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 307

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 308 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRXXGEXHYEIAQEVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|46360661|gb|AAS89112.1| ATP synthase beta subunit [Diplophyllum obtusifolium]
 gi|46360716|gb|AAS89139.1| ATP synthase beta subunit [Scapania nemorea]
          Length = 382

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|55056894|emb|CAF21948.1| ATP synthase beta subunit [Hesperocyparis arizonica]
          Length = 443

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 178/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSACWCGR 104
           KN+D  GQ I +  ++  +        +++           ++   G   +       GR
Sbjct: 19  KNNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 78

Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D L+   + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 79  IFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 135

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 136 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 194

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 195 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 254

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 255 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 312

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E +D
Sbjct: 313 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQD 372

Query: 389 IRLIGG 394
           I  I G
Sbjct: 373 IIAILG 378


>gi|307343668|emb|CBJ19251.1| atpD synthase beta subunit [Micromonospora viridifaciens]
          Length = 320

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|7708446|emb|CAB89916.1| ATP synthase beta subunit [Impatiens repens]
          Length = 425

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+G + L+     +       +S+ G       E  + Y+   +KK
Sbjct: 147 PYRRGGKIGLFGGAGVGXTVLIMELINNIAKAHGSVSVFGGXXERTPEXNDLYM--EMKK 204

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 205 SGVINEQNFGESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 264

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 265 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTD 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + 
Sbjct: 323 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQ 382

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 383 RYKELQDIIAILG 395


>gi|184127869|gb|ACC67834.1| ATP synthase beta chain [Angiopteris evecta]
          Length = 400

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 13  LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 70

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 71  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 130

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 131 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 190

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ +SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 191 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 248

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 249 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 307

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 308 QDIIAILG 315


>gi|171462853|ref|YP_001796966.1| ATP synthase F1, beta subunit [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226740659|sp|B1XSD4|ATPB_POLNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|171192391|gb|ACB43352.1| ATP synthase F1, beta subunit [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 466

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 154/305 (50%), Gaps = 18/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV-PPAMNRQRVEKG---FKTGIRVIDIF 155
              GR+++ LG+PID       G ++ E    +  PA     +       +TGI+VID+ 
Sbjct: 89  ATLGRIMDVLGRPIDD-----AGPIATEERRAIHQPAPKFDELSPSVDLLETGIKVIDLV 143

Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
            P   G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +   
Sbjct: 144 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKE 202

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            N + K  +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++
Sbjct: 203 SNVIDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILFFVDNIYRYTLAGTEVS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ +L ERI  +  + G++T++ +V V  D+  DP   +   
Sbjct: 263 ALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSVTSIQAVYVPADDLTDPSPATTFL 320

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+    + + R++E RDI
Sbjct: 321 HLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVARDVQMTLQRYKELRDI 380

Query: 390 RLIGG 394
             I G
Sbjct: 381 IAILG 385


>gi|113910750|gb|ABI48107.1| ATPase beta subunit [Riella helicophylla]
          Length = 456

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|323345611|ref|ZP_08085834.1| ATP synthase F1 sector beta subunit [Prevotella oralis ATCC 33269]
 gi|323093725|gb|EFZ36303.1| ATP synthase F1 sector beta subunit [Prevotella oralis ATCC 33269]
          Length = 508

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 155/330 (46%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +GKPIDG  +L   + S  I    P        ++   TGI+VID+  P   G 
Sbjct: 95  GRMMNVIGKPIDGMSALNM-EGSYPIHRAAPKFDELSTHKEMLATGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + + D L       GD
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLESGVIRYGD 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             +K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFRKAMEEGKWDLSLVDPEEVQKSQATLVYGQMNEPPGARASVALSGLTVAEGFRDHGGQ 273

Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +KG
Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKKG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R +AE G YP VDPL S SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKIAELGIYPAVDPLGSTSRILDPLI 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                      +  L+ R+ E +DI  I G
Sbjct: 392 VGKAHYDCAQRVKQLLQRYNELQDIIAILG 421


>gi|164566135|gb|ABY61210.1| ATP synthase beta subunit [Danaea simplicifolia]
          Length = 394

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRRLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|115349966|ref|YP_764399.1| CF1 beta subunit of ATP synthase [Stigeoclonium helveticum]
 gi|122165149|sp|Q06SG7|ATPB_STIHE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|98990180|gb|ABF60147.1| CF1 beta subunit of ATP synthase [Stigeoclonium helveticum]
          Length = 484

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + +  + I    P   +       F+TGI+V+D+  P   
Sbjct: 99  GRIFNVLGEPVD---NLGPVETEQKLPIHRSAPAFTDLDTRLAIFETGIKVVDLLAPYRR 155

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD----- 212
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +         
Sbjct: 156 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVINE 215

Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 216 SNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 275

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 276 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 333

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +       DE       +   + R++E +
Sbjct: 334 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYACAQKVKETLQRYKELQ 393

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 394 DIIAILG 400


>gi|330861087|emb|CBX71354.1| hypothetical protein YEW_KR45460 [Yersinia enterocolitica W22703]
          Length = 169

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 95/161 (59%), Gaps = 1/161 (0%)

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILD
Sbjct: 3   GEPPATKGYPPSVFAKLPALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILD 62

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GH+VL+R LAE G YP +D  AS+SR        +    V     L+  F+  RD+  +G
Sbjct: 63  GHVVLSRRLAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVG 122

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
            Y  G D +LDKA+   P +  FL+Q   + SS ED  Q +
Sbjct: 123 AYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 163


>gi|307343666|emb|CBJ19250.1| atpD synthase beta subunit [Micromonospora siamensis]
          Length = 301

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 3   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 62

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL +D+I
Sbjct: 63  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 122

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 123 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 180

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR+    +  +E   V++ +  
Sbjct: 181 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 240

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 241 ILQKYKDLQDIIAILG 256


>gi|21684897|emb|CAD11575.1| ATP synthase beta subunit [Joinvillea gaudichaudiana]
          Length = 491

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213

Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 214 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEXAQRVKQTLXR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|21684903|emb|CAD11578.1| ATP synthase beta subunit [Marsippospermum grandiflorum]
          Length = 491

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 151/306 (49%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    + +  PA      E   F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGQPID---NLGPVDTSTTFPIHRSAPAFIELNTELSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++     
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFAGVGERTREGNDLYKEMKESG 214

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 215 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP V PL S S +        E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTMLQSNIVGKEHYETAQRVKQTSQRY 392

Query: 384 EETRDI 389
           +E +D+
Sbjct: 393 KELQDV 398


>gi|8517656|emb|CAB94375.1| ATP synthase beta subunit [Polygala cruciata]
          Length = 481

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 212 GVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|14591711|ref|NP_143799.1| V-type ATP synthase subunit B [Pyrococcus horikoshii OT3]
 gi|12585423|sp|O57729|VATB_PYRHO RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|3258418|dbj|BAA31101.1| 465aa long hypothetical H(+)-transporting ATP synthase subunit B
           [Pyrococcus horikoshii OT3]
          Length = 465

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 22/351 (6%)

Query: 27  SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81
           S+I+ +Y  +  +   + V  G+ V +         GQV+  R N+ IV +       +I
Sbjct: 9   STISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENMAIVQVFEGTRDLDI 68

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138
               + F     ++  S    GR+ N +GKPIDG   +    + D+    ++ V  A  R
Sbjct: 69  KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191
             ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+
Sbjct: 129 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF-AVV 183

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY +   D
Sbjct: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL+IL  +T +  ++REI+    E+P  RGYP  ++++L  + ER G     KG+IT 
Sbjct: 244 MHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQ 303

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354


>gi|157826257|ref|YP_001493977.1| F0F1 ATP synthase subunit beta [Rickettsia akari str. Hartford]
 gi|166201729|sp|A8GPZ4|ATPB_RICAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157800215|gb|ABV75469.1| F0F1 ATP synthase subunit beta [Rickettsia akari str. Hartford]
          Length = 473

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 155/307 (50%), Gaps = 19/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+PIDG   +   ++S   + K  P    Q  E+    TGI+V+D+  P   G
Sbjct: 89  GRIMNVVGEPIDGKGDIKSSNISA--IYKSAPDFTNQSTERNILVTGIKVVDLLAPYIKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL---- 214
            +IG+F G+G+GK+ L+     +         + + VGER RE  +   + +   +    
Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVIDLE 206

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268
                K  +V    +  P  R    L+ +TIAE F   + G +VL  +D+I RF  +  E
Sbjct: 207 KPENSKVALVYGQMNAPPGARARVALSGLTIAESFRDMNGGQDVLFFVDNIFRFTQAGSE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP   + 
Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATS 324

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD   VL+R +AE G YP VDPL S S++ D     +E   V+  +  ++  ++  +
Sbjct: 325 FAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKSLQ 384

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 385 DIIAILG 391


>gi|307343698|emb|CBJ19266.1| atpD synthase beta subunit [Micromonospora sp. GUI37]
          Length = 298

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|183206572|gb|ACC54484.1| ATP synthase beta subunit [Leptocodon gracilis]
          Length = 460

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 80  GATLGRIFNVLGEPIDNLGPVDSGTTS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPY 138

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 139 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 198

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 199 NEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 259 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPAPA 316

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E
Sbjct: 317 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYKE 376

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 377 LQDIITILG 385


>gi|312131445|ref|YP_003998785.1| ATP synthase f1 subcomplex beta subunit [Leadbetterella byssophila
           DSM 17132]
 gi|311907991|gb|ADQ18432.1| ATP synthase F1 subcomplex beta subunit [Leadbetterella byssophila
           DSM 17132]
          Length = 501

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 159/329 (48%), Gaps = 41/329 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG   +    +S  I    P   +     +   TGI+VID+  P   G 
Sbjct: 90  GRLFNVVGEAIDGLGEVKTKGIS--IHRSAPKFEDLATSTEVLFTGIKVIDLLAPYVKGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE IE  +   GD
Sbjct: 148 KIGLFGGAGVGKTVLIQELINNIAKAYAGLSVFAGVGERTREGNDLLREMIESGIVKYGD 207

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246
             K S+                      +    +E P  R    L+ +T+AEYF      
Sbjct: 208 EFKHSMEEGGWDLSKVDRELLKDSQATFIFGQMNEPPGARARVALSGLTVAEYFRDGDGE 267

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +++  G+
Sbjct: 268 GKGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERIASTKR--GS 325

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+      
Sbjct: 326 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRILTAEVL 385

Query: 367 ADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
            D     +  + +L+ R++E +DI  I G
Sbjct: 386 GDAHYACAQRVKNLLQRYKELQDIIAILG 414


>gi|254780615|ref|YP_003065028.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040292|gb|ACT57088.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 478

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 25/334 (7%)

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +S GD V   G +  +       GR++N +G+P+D   ++   +     + +  P+   Q
Sbjct: 69  LSRGDCVIDTGTQITVPVGEATLGRIMNVIGEPVDDQGAIISSE--KRAIHQPSPSYTEQ 126

Query: 140 RVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISL 194
             +     TGI+VID+ +P   G +IG+F G+G+GK+ L+    +  A++     V    
Sbjct: 127 STDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG- 185

Query: 195 VGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVTI 241
           VGER RE  +   + +   +              K  ++    +E P  R    LT +T+
Sbjct: 186 VGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTV 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +G +VL  +D+I RF  +  EI+   G +P A GY +++  E+  L ERI  + 
Sbjct: 246 AEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERI--TT 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V ++ V  D+  DP   +  + LD   VL+R ++E+G YP +DPL S S + 
Sbjct: 304 TLKGSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSML 363

Query: 362 DKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +      E   V+  +  ++ R++  +DI  I G
Sbjct: 364 EIDIVGQEHYDVARRVQEILQRYKSLQDIIAILG 397


>gi|113910880|gb|ABI48172.1| ATPase beta subunit [Ptychomitrium incurvum]
          Length = 472

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 85  LGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 142 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 201

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 202 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 261

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 262 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 319

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 320 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 378

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 379 LQDIIAILG 387


>gi|119719258|ref|YP_919753.1| V-type ATP synthase subunit B [Thermofilum pendens Hrk 5]
 gi|119524378|gb|ABL77750.1| Sodium-transporting two-sector ATPase [Thermofilum pendens Hrk 5]
          Length = 472

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 178/357 (49%), Gaps = 17/357 (4%)

Query: 53  GKNS-DNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALG 110
           GK+S +  G+V+  ++    +  +G  E +    L+ F    F+I  S    GRV N   
Sbjct: 48  GKDSRERFGRVLETSIGQAVVQVLGDREGLETDTLLKFTGSTFKIRVSEDVIGRVFNGRF 107

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PIDG   +  G+L  EI  +    ++R+      +TG+  ID    +  GQ++ +F+ S
Sbjct: 108 EPIDGLPPILSGELR-EITGEPINPISREYPHDFIQTGVSAIDGLFSMVRGQKLPIFSVS 166

Query: 171 GIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
           G+  + L +  AR            V+ + +G R  E   F+E +     +++ V V+  
Sbjct: 167 GLPHNLLAAQVARQATVRGEGEQFAVVFAGIGLRKTEAEFFLEQFRETGAIERLVAVLNM 226

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGY 282
           +D+  + R M P  A+T+AEY +   D +VL+I+  +T +  ++RE+++  GE+P   GY
Sbjct: 227 ADDPAVERLMTPRIALTVAEYLAFDLDMHVLVIMSDMTNYCEALREVSSARGEIPGRLGY 286

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  ++S+L  + ER G  + +KG+IT    + + G +   PI D    I +G I L++ +
Sbjct: 287 PGYMYSDLATIYERAGVIKGKKGSITLFPILTMPGGDLRHPIPDLTGYITEGQIFLSQEM 346

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI-RLIG 393
             +G YPP++ L S+SRL            D + L   L     R  + RD+ R+IG
Sbjct: 347 YAQGIYPPINILPSLSRLMKSGIGPGKTREDHRYLADQLYDAYSRGVKARDLARIIG 403


>gi|223931068|ref|YP_002586929.1| ATP synthase CF1 beta subunit [Syntrichia ruralis]
 gi|219562282|gb|ACL27613.1| ATP synthase CF1 beta subunit [Syntrichia ruralis]
          Length = 492

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 220 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|113910870|gb|ABI48167.1| ATPase beta subunit [Bryum argenteum]
          Length = 449

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|111283724|gb|ABH09212.1| ATPase beta subunit [Trichotemnoma corrugatum]
          Length = 452

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 63  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 119

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 120 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 179

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 180 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 239

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 240 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 297

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 298 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 356

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 357 KELQDIIAILG 367


>gi|332880270|ref|ZP_08447948.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681715|gb|EGJ54634.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 507

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 165/330 (50%), Gaps = 44/330 (13%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV+N +G+ IDG  +L +   +  I    P   +    ++   TGI+VID+  P 
Sbjct: 91  AQIRGRVMNVVGEAIDGMQALNETG-AFPIHRDPPKFEDLSTTQEVLFTGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
             G +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  
Sbjct: 150 LKGGKIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESG 207

Query: 210 L---GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF 245
           +   GD   KS+                     +V    +E P  R    L+ +T+AE F
Sbjct: 208 VIKYGDEFLKSMETGHWDLSKVDMDEVEKSQVAMVFGQMNEPPGARSSVALSGLTLAESF 267

Query: 246 --SSKGD---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
             ++KGD   ++L  +D+I RF  +  E++   G +P A GY  ++ SE+ ++ ERI  +
Sbjct: 268 RDNNKGDGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGQMQERI--T 325

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+
Sbjct: 326 STKNGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRI 385

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            D      E  +    +  ++ R +E +DI
Sbjct: 386 LDPLIVGQEHYETAQRVKQILQRNKELQDI 415


>gi|309322239|ref|YP_003934317.1| ATP synthase CF1 beta subunit [Monsonia speciosa]
 gi|197132380|gb|ACH47708.1| ATP synthase CF1 beta subunit [Monsonia speciosa]
 gi|300069332|gb|ADJ66452.1| ATP synthase CF1 beta subunit [Monsonia speciosa]
          Length = 498

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + ++ K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINDQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|119350465|gb|ABL63183.1| AtpB [Carteria sp. UTEX2]
          Length = 379

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    +  + I    P  ++       F+TGI+V+D+  P  
Sbjct: 34  LGRIFNVLGEPVD---NLGPVNAEEKLPIHRLAPAFVDLDTRLSIFETGIKVVDLLAPYR 90

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +           +
Sbjct: 91  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 150

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E  L D+  K  +V     E P+      L+A+T+AEYF      +VL  +D+I RF  +
Sbjct: 151 EKNLTDS--KVALVYGQMXEPPVAXMRVALSALTMAEYFRDVNKQDVLFFIDNIFRFVQA 208

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 209 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 266

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383
               + LD   VL+R+LA +G YP VDPL S S +  + W   EK   S  ++   + R+
Sbjct: 267 AVTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGSAQAVKKTLQRY 325

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 326 KELQDIIAILG 336


>gi|118917428|dbj|BAF40530.1| ATP synthase beta subunit [Ionidium commune]
          Length = 489

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 212

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 213 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGDEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIITILG 401


>gi|113910842|gb|ABI48153.1| ATPase beta subunit [Buxbaumia aphylla]
          Length = 465

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D+S       P PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|304315093|ref|YP_003850240.1| A1AO ATPase, subunit B [Methanothermobacter marburgensis str.
           Marburg]
 gi|12585396|sp|O27035|VATB_METTH RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|302588552|gb|ADL58927.1| A1AO ATPase, subunit B [Methanothermobacter marburgensis str.
           Marburg]
          Length = 463

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 17/310 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           +I  S    GR+ +  GKPIDG  + + + +L +      P A  R+   +  +TGI  I
Sbjct: 83  KIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAA--REFPAEFIQTGISTI 140

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFI 206
           D    L  GQ++ +F+GSG+  + L +  AR       +    VI + +G    E   F+
Sbjct: 141 DGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLAEESEFAVIFAAMGITHEEANYFM 200

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
            D+     L++  V +  +D+  I R + P  A+T AEYF+ + D +VL+IL  +T +  
Sbjct: 201 RDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDMHVLVILTDLTNYCE 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI+    E+P  RGYP  ++++L  L ER G    ++G+IT +  +++  D+   PI
Sbjct: 261 ALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQMPILVMPQDDITHPI 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLI 380
            D    I +G IVL+R L  +G YPPVD L S+SRL      +  + ++   VS    L 
Sbjct: 321 PDLTGYITEGQIVLSRDLHRKGIYPPVDVLPSLSRLMSGGIGEGRTREDHSGVSD--QLY 378

Query: 381 HRFEETRDIR 390
             + E RD+R
Sbjct: 379 SAYAEGRDLR 388


>gi|113910802|gb|ABI48133.1| ATPase beta subunit [Tylimanthus saccatus]
          Length = 456

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 182

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 183 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R
Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQR 359

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 360 YKELQDIIAILG 371


>gi|113910860|gb|ABI48162.1| ATPase beta subunit [Rhabdoweisia fugax]
          Length = 456

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|75330429|sp|Q8MBG5|ATPB_CUSPE RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633447|gb|AAM52198.1| ATP synthase beta subunit [Cuscuta pentagona]
          Length = 487

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 153/306 (50%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +    LS  I    PP +        F+TGI+V+D+  P   G
Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214
            ++G+F G+G+GK+ L+     +         +   VGER RE      E  E  + +  
Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 223 KLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+RSLA +G YP VDPL S S  L  +       K    +   + R++E +D
Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGKQHYKTAQRVKQTLQRYKELQD 400

Query: 389 IRLIGG 394
           I  I G
Sbjct: 401 IIAILG 406


>gi|15678972|ref|NP_276089.1| V-type ATP synthase subunit B [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622051|gb|AAB85450.1| ATP synthase, subunit B [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 465

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 17/310 (5%)

Query: 94  RISPSACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           +I  S    GR+ +  GKPIDG  + + + +L +      P A  R+   +  +TGI  I
Sbjct: 85  KIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAA--REFPAEFIQTGISTI 142

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFI 206
           D    L  GQ++ +F+GSG+  + L +  AR       +    VI + +G    E   F+
Sbjct: 143 DGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLAEESEFAVIFAAMGITHEEANYFM 202

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
            D+     L++  V +  +D+  I R + P  A+T AEYF+ + D +VL+IL  +T +  
Sbjct: 203 RDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDMHVLVILTDLTNYCE 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++REI+    E+P  RGYP  ++++L  L ER G    ++G+IT +  +++  D+   PI
Sbjct: 263 ALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQMPILVMPQDDITHPI 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLI 380
            D    I +G IVL+R L  +G YPPVD L S+SRL      +  + ++   VS    L 
Sbjct: 323 PDLTGYITEGQIVLSRDLHRKGIYPPVDVLPSLSRLMSGGIGEGRTREDHSGVSD--QLY 380

Query: 381 HRFEETRDIR 390
             + E RD+R
Sbjct: 381 SAYAEGRDLR 390


>gi|307343648|emb|CBJ19241.1| atpD synthase beta subunit [Micromonospora olivasterospora]
          Length = 298

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|61196960|gb|AAX39465.1| ATP synthase beta subunit [Chara australis]
          Length = 402

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|89574003|gb|ABD77227.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Monodelphis domestica]
          Length = 320

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 4   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 62

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 63  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 122

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 123 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 180

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+
Sbjct: 181 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVA 240

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 241 RGVQKILQDYKSLQDIIAILG 261


>gi|56236578|gb|AAV84656.1| ATP synthase beta subunit [Saxegothaea conspicua]
          Length = 424

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  + S    + +  PA  +   +   F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---DLGPVNASTRSPIHRSAPAFTQLDTKFSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 151 VIKEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|71277372|gb|AAZ29866.1| ATP synthase beta subunit [Chara vulgaris]
 gi|71277374|gb|AAZ29867.1| ATP synthase beta subunit [Chara vulgaris]
          Length = 348

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKHDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|194476695|ref|YP_002048874.1| ATP synthase subunit B [Paulinella chromatophora]
 gi|171191702|gb|ACB42664.1| ATP synthase subunit B [Paulinella chromatophora]
          Length = 488

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P     Q   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVNT-TTTAPIHRAAPKLTELQTKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             +L KS V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 SKDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++ +L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +   +   DE  +   ++   + R++E 
Sbjct: 334 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGDEHYRTARAVQANLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|89574039|gb|ABD77245.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Canis lupus familiaris]
          Length = 321

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 10  TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 68

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 69  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 128

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 129 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 186

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     +E   V+
Sbjct: 187 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVA 246

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 247 RGVQKILQDYKSLQDIIAILG 267


>gi|7706844|emb|CAB90038.1| ATP synthase beta subunit [Actinidia chinensis]
          Length = 489

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P  +  +     F+TGI+V+D+  P 
Sbjct: 95  GATLGRIFNVLGEPVDNLGPVDTG-ITSPIHRSAPAFVQLETKLSIFETGIKVVDLLAPY 153

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +
Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGV 212

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +  S +  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSNEHYETAQRVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIITILG 400


>gi|20467371|gb|AAL27816.1| ATPase beta subunit [Ephedra sp. CR33]
          Length = 446

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 77  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 133

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 134 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 193

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 194 EKNITESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 253

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 254 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 311

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 312 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 371

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 372 QDIIAILG 379


>gi|5758870|gb|AAD50844.1| ATP synthase beta subunit [Cyanastrum cordifolium]
          Length = 496

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|34501408|ref|NP_904195.1| ATP synthase CF1 beta subunit [Physcomitrella patens subsp. patens]
 gi|38258930|sp|P80658|ATPB_PHYPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|34494778|dbj|BAC85045.1| ATP synthase beta subunit [Physcomitrella patens subsp. patens]
          Length = 494

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 165/326 (50%), Gaps = 22/326 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEK 143
           D+V       +       GR+ N LG+P+D   +LG  D S    + +  PA  +   + 
Sbjct: 90  DVVDTGAALSVPVGEATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKL 146

Query: 144 G-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 147 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 206

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250
           RE  + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      
Sbjct: 207 REGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQ 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 267 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 324

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 325 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 383

Query: 371 --KLVSSLTHLIHRFEETRDIRLIGG 394
             +    +   + R++E +DI  I G
Sbjct: 384 HYETAQGVKETLQRYKELQDIIAILG 409


>gi|307343752|emb|CBJ19293.1| atpD synthase beta subunit [Micromonospora sp. SR4]
          Length = 305

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 143/259 (55%), Gaps = 8/259 (3%)

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGER 198
           ++  +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER
Sbjct: 7   DRELETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGER 66

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
            RE  + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +
Sbjct: 67  TREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFI 126

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V 
Sbjct: 127 DNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVP 184

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D++ DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + 
Sbjct: 185 ADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATE 244

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++ ++++ +DI  I G
Sbjct: 245 VKRILQKYKDLQDIIAILG 263


>gi|260911875|ref|ZP_05918441.1| ATP synthase F1 [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633991|gb|EEX52115.1| ATP synthase F1 [Prevotella sp. oral taxon 472 str. F0295]
          Length = 509

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +GKPIDG       +L+ME    I  + P        ++   TGI+VID+  P 
Sbjct: 95  GRMMNVIGKPIDG-----MSELNMEGAYPIHREAPKFEELSTHKEMLATGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE  + I D +     
Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVI 209

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247
             GD  +K++                     +V    +E P  R    L+ +T+AE F  
Sbjct: 210 RYGDKFRKAMEEGKWDLSLVDPEELRQSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269

Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            G       +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 270 HGGKDGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ 
Sbjct: 328 TKRGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D      E  +    +  ++ R++E +DI  I G
Sbjct: 388 DPLIVGKEHYECAQRVKQILQRYKELQDIIAILG 421


>gi|115531922|ref|YP_784078.1| ATP synthase CF1 beta subunit [Pelargonium x hortorum]
 gi|122164272|sp|Q06FV3|ATPB_PELHO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112382076|gb|ABI17269.1| ATP synthase CF1 beta subunit [Pelargonium x hortorum]
          Length = 498

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K PPA      +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDNRTTSPIHKSPPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
           S V+    VA S         +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 219 SGVINEQKVAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + 
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGNEHYEIAQRVKQTLQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|44885332|dbj|BAD11909.1| ATP synthase beta subunit [Nitella acuminata]
          Length = 340

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|145588215|ref|YP_001154812.1| F0F1 ATP synthase subunit beta [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189081337|sp|A4SUT4|ATPB_POLSQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145046621|gb|ABP33248.1| ATP synthase F1 subcomplex beta subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 466

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 154/305 (50%), Gaps = 18/305 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV-PPAMNRQRVEKG---FKTGIRVIDIF 155
              GR+++ LG+PID       G ++ E    +  PA     +       +TGI+VID+ 
Sbjct: 89  ATLGRIMDVLGRPIDD-----AGPIATEERRAIHQPAPKFDELSPSVDLLETGIKVIDLV 143

Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
            P   G ++G+F G+G+GK+     L++  A+      V    VGER RE  +F  +   
Sbjct: 144 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKE 202

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            N + K  +V    +E P  R    LT +T+AE F  +G ++L  +D+I R+  +  E++
Sbjct: 203 SNVIDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILFFVDNIYRYTLAGTEVS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  E+ +L ERI  +  + G++T++ +V V  D+  DP   +   
Sbjct: 263 ALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSVTSIQAVYVPADDLTDPSPATTFL 320

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389
            LD  +VL+R +A  G YP VDPL S SR  D      E   V+    + + R++E RDI
Sbjct: 321 HLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVARDVQMTLQRYKELRDI 380

Query: 390 RLIGG 394
             I G
Sbjct: 381 IAILG 385


>gi|113910850|gb|ABI48157.1| ATPase beta subunit [Tetraphis pellucida]
          Length = 465

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|75338126|sp|Q9TJR9|ATPB_PROWI RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|5748664|emb|CAB53102.1| ATP synthase CF1 beta chain [Prototheca wickerhamii]
          Length = 481

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 25/329 (7%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQR 140
           G  VF  G   ++       GR+ N LG+ ID   +LG  D S  + I    P  ++   
Sbjct: 78  GMTVFDTGDVLKVPVGRSTLGRIFNVLGETID---NLGPADTSNQLPIHRSAPKFIDLDT 134

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVG 196
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  
Sbjct: 135 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKTHGGVSVFGGVG- 193

Query: 197 ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +     +         K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 194 ERTREGNDLYMEMKESGIINEALISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 253

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G LP A GY  ++ SE+  L ERI  +  + G+I
Sbjct: 254 SSQDVLLFIDNIFRFLQAGSEVSALLGRLPSAVGYQPTLASEMGALQERI--TSTKDGSI 311

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V +  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W  
Sbjct: 312 TSIQAVYIPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLESTSTML-QPWIV 370

Query: 368 DEK--KLVSSLTHLIHRFEETRDIRLIGG 394
            E+  K   ++   + R++E +DI  I G
Sbjct: 371 GEEHYKCSQNVKQTLQRYKELQDIIAILG 399


>gi|289450764|ref|YP_003475681.1| ATP synthase ab C-terminal domain-containing protein [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289185311|gb|ADC91736.1| ATP synthase ab C-terminal domain protein [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 463

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 14/305 (4%)

Query: 98  SACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + +G P DG   L  +  + +  +   P A  R   ++  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGMGHPADGGPELIPEARMDVNGLPLNPTA--RDYPDEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DK-----VIISLVGERGREVREFIEDY 209
            L  GQ++ +F+ SG+  S L +  AR      DK     V+ + +G    E   FI+D+
Sbjct: 140 TLVRGQKLPIFSASGLPHSQLGAQIARQAKVIGDKEQKFAVVFAAMGITFEEADYFIKDF 199

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                + ++V+ +  +D+  I R   P  A+T AEY + K D +VL+I+  IT +A ++R
Sbjct: 200 QRTGAIDRTVLFINLADQPAIERIATPRMALTCAEYLAFKKDMHVLVIMTDITYYAEALR 259

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++    E+P  RGYP  ++++L  + ER G  + +KG+IT V  + +  ++   PI D 
Sbjct: 260 EVSAARKEVPGRRGYPGYLYTDLATMYERAGRVKGKKGSITMVPILTMPDEDKTHPIPDL 319

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEE 385
              I +G I+L+R L ++G  PPVD L S+SRL DK     + +     ++  L   +  
Sbjct: 320 TGYITEGQIILSRELYKKGLRPPVDVLPSLSRLKDKGIGEGKTREDHAGTMNQLFAAYSR 379

Query: 386 TRDIR 390
            +D R
Sbjct: 380 GKDAR 384


>gi|150035729|gb|ABR67210.1| ATP synthase beta subunit [Pharus lappulaceus]
          Length = 484

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 208 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|14718009|gb|AAK72746.1| ATP synthase beta subunit [Cleome hassleriana]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDMGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|19745324|ref|NP_606460.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS8232]
 gi|73920438|sp|Q8P2U5|VATB_STRP8 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|19747425|gb|AAL96959.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes
           MGAS8232]
          Length = 471

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L D  +H G      GQV+ +  D  +V +     G  ++   + F      ++ S
Sbjct: 27  HYNELVDITLHNGARRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ + +G+PIDG   L   +  ++I  +    + R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFDGMGQPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY +  KG +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L++ L + G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357


>gi|307343694|emb|CBJ19264.1| atpD synthase beta subunit [Micromonospora sp. GUI28]
          Length = 302

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|307343650|emb|CBJ19242.1| atpD synthase beta subunit [Micromonospora pallida]
          Length = 302

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|297612839|ref|NP_001066388.2| Os12g0207500 [Oryza sativa Japonica Group]
 gi|255670138|dbj|BAF29407.2| Os12g0207500 [Oryza sativa Japonica Group]
          Length = 336

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 16  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHISAPAFIELDTKLSIFQTGIKVVDLLA 72

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 73  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 132

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 133 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 192

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E+++  G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 193 AGSEVSSLLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVHADDLTDPA 250

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 251 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 310

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 311 KELQDIIAILG 321


>gi|6687550|emb|CAB65004.1| ATP synthase beta subunit [Eremosyne pectinata]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +   A   +E  ++   +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPAIVGEEHYEIAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|118411012|ref|YP_874407.1| ATP synthase CF1 beta chain [Phaeodactylum tricornutum]
 gi|125987719|sp|A0T0D2|ATPB_PHATC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|116739759|gb|ABK20630.1| ATP synthase CF1 beta chain [Phaeodactylum tricornutum]
          Length = 475

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+P+D    + K D ++ I    P     +     F+TGI+V+D+  P   G
Sbjct: 91  LGRIFNVIGEPVDEQGEV-KYDETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRG 149

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+     +   
Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINE 208

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 209 KNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAGSE 268

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   + 
Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPATT 326

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +       +E    + ++   + R++E +
Sbjct: 327 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQVGIVTEEHYATAENVKETLQRYKELQ 386

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 387 DIIAILG 393


>gi|291568724|dbj|BAI90996.1| ATP synthase beta chain [Arthrospira platensis NIES-39]
          Length = 485

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 166/310 (53%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N +G+PID   +LG    D +  I    P  ++ +     F+TGI+V+D+  P  
Sbjct: 97  LGRIFNVVGEPID---NLGPVPNDETSSIHRPAPAFVDLETSPSVFETGIKVVDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE      E IE  + 
Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESGVI 212

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265
             ++L +S V  V    +E P  R    L+A+T+AEYF   SK D VLL +D+I RF  +
Sbjct: 213 NKEDLPQSKVALVYGQMNEPPGARMRVALSALTMAEYFRDVSKQD-VLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+LA +G YP VDPL S S +   +   +E  +   ++   + R++
Sbjct: 330 ATTFAHLDATTVLSRALASKGIYPAVDPLDSSSTMLQPSVVGEEHYQTARAVQSTLQRYK 389

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 390 ELQDIIAILG 399


>gi|297527269|ref|YP_003669293.1| H(+)-transporting two-sector ATPase [Staphylothermus hellenicus DSM
           12710]
 gi|297256185|gb|ADI32394.1| H(+)-transporting two-sector ATPase [Staphylothermus hellenicus DSM
           12710]
          Length = 469

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 169/336 (50%), Gaps = 26/336 (7%)

Query: 43  VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA 99
           V  G+ V V  G     LGQVI ++ D   I   G   +I L    + +     ++    
Sbjct: 30  VSYGEVVEVVLGSGEAKLGQVIDVSKDATIIQVFGGVSDIDLKVSKVRYRGETLKLPVGI 89

Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
              GR+ + LG+PIDG      +D L      +   S++PP+       +  +TGI  ID
Sbjct: 90  DMLGRIFDGLGRPIDGGPPIVPEDYLDINGSPINPASRLPPS-------EFIETGISAID 142

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206
               +  GQ++ +F+GSG+  + + +   R        + F  V+ + +G    +   FI
Sbjct: 143 GLNSIVRGQKLPIFSGSGLPHNRIAAQIVRQARVRGKEEKF-AVVFAAIGVSYDDAMFFI 201

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           E++      ++ V    + +SP++ ++A P  A+T AE+ + K D +VL+IL  +T +  
Sbjct: 202 ENFKNYGALENAVAFINTADSPVIERIAIPRVALTAAEFLAWKHDMHVLVILTDMTNYCE 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++RE++    E+P  RGYP  ++++L  + ER G  E +KG+IT +  + +  D+   PI
Sbjct: 262 ALRELSAAREEVPSRRGYPGYMYTDLATIYERAGRVEGKKGSITQMPILTMPNDDITHPI 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G +VL+R L  +G YPP D L S+SRL
Sbjct: 322 PDLTGYITEGQLVLSRQLWLKGIYPPFDILMSLSRL 357


>gi|57868958|gb|AAW57475.1| ATP synthase beta subunit [Galax urceolata]
          Length = 475

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 216

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 217 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 276

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 334

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 335 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|307343756|emb|CBJ19295.1| atpD synthase beta subunit [Micromonospora sp. SR15]
          Length = 320

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   +   VLL +D+I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +   A+   + + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ ++++ +DI  I G
Sbjct: 239 ILQKYKDLQDIIAILG 254


>gi|77165547|ref|YP_344072.1| V-type ATP synthase subunit B [Nitrosococcus oceani ATCC 19707]
 gi|254434189|ref|ZP_05047697.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Nitrosococcus oceani AFC27]
 gi|123730639|sp|Q3J9F4|VATB_NITOC RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|76883861|gb|ABA58542.1| Sodium-transporting two-sector ATPase [Nitrosococcus oceani ATCC
           19707]
 gi|207090522|gb|EDZ67793.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Nitrosococcus oceani AFC27]
          Length = 479

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 176/362 (48%), Gaps = 24/362 (6%)

Query: 51  HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCGRV 105
           H+G+  +  GQVI  + ++V    V + E     DL   W RF   P     S    GR+
Sbjct: 36  HRGRRRN--GQVIFTSGEVVL---VQVFEGTDDLDLERTWVRFLEEPFEIPLSPDVLGRI 90

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            + +G P D D       L   +       + R   ++  +TGI  ID    L  GQ++ 
Sbjct: 91  FDGVGAPRD-DRPPMIAPLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGLNSLVRGQKLP 149

Query: 166 VFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           +F+GSG+  + L +   R       +    ++ + +G    + R F E++     L K V
Sbjct: 150 IFSGSGLPHNRLAAQIVRQAKLLGEETRFVMVFAAMGVTYSDARFFQEEFENSGVLGKVV 209

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           + +  +D+ PI R + P TA+  AEY + + D +VL+++  +T +A ++RE+AT  G++P
Sbjct: 210 MYLNLADDPPIKRLLLPRTALACAEYLAFEQDLHVLVVMTDMTHYAEALREVATAKGDVP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP  ++S+L  + ER G  +  +G+IT V  V +  D+   PI D    I +G IV
Sbjct: 270 SRKGYPGYLYSDLAEIYERAGRIKNRRGSITMVPVVSMPSDDITHPIPDLTGYITEGQIV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           L+R L  +G YPPV+   S+SRL        +   D  ++ S L     +  E R++  I
Sbjct: 330 LSRELHHQGIYPPVNIPPSLSRLMKDGIGKNSTREDHPRVASQLYAAYAKALEVRNLASI 389

Query: 393 GG 394
            G
Sbjct: 390 IG 391


>gi|62085223|gb|AAX63014.1| ATP synthase beta subunit [Euonymus alatus]
          Length = 470

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +  ++ K  PA  +   +   F+TGI+V+D+  P
Sbjct: 89  ATLGRIFNVLGEPVD---NLGPVDTRTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 146 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 205

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 206 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 266 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 323

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 324 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 383

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 384 ELQDIIAILG 393


>gi|183206512|gb|ACC54454.1| ATP synthase beta subunit [Cyananthus lobatus]
          Length = 488

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 211 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   ++   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQNVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIITILG 399


>gi|284053202|ref|ZP_06383412.1| F0F1 ATP synthase subunit beta [Arthrospira platensis str. Paraca]
          Length = 485

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 166/310 (53%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N +G+PID   +LG    D +  I    P  ++ +     F+TGI+V+D+  P  
Sbjct: 97  LGRIFNVVGEPID---NLGPVPNDETSSIHRPAPAFVDLETSPSVFETGIKVVDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE      E IE  + 
Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESGVI 212

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265
             ++L +S V  V    +E P  R    L+A+T+AEYF   SK D VLL +D+I RF  +
Sbjct: 213 NKEDLPQSKVALVYGQMNEPPGARMRVALSALTMAEYFRDVSKQD-VLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+LA +G YP VDPL S S +   +   +E  +   ++   + R++
Sbjct: 330 ATTFAHLDATTVLSRALASKGIYPAVDPLDSSSTMLQPSVVGEEHYQTARAVQSTLQRYK 389

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 390 ELQDIIAILG 399


>gi|124487966|gb|ABN12066.1| putative ATP synthase beta subunit [Maconellicoccus hirsutus]
          Length = 362

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 139/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 19  TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 77

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 78  NDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 137

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 138 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIY 195

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     A+     
Sbjct: 196 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNTA 255

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 256 RGVQKILQDYKSLQDIIAILG 276


>gi|75336517|sp|Q9MS49|ATPB_BRANA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|8745523|gb|AAF78949.1|AF267641_1 ATP synthase beta subunit [Brassica napus]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 179/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P++   +LG  D L+   + K  PA ++       F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVN---NLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + + L
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 225

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 226 NLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSAEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|289522918|ref|ZP_06439772.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503942|gb|EFD25106.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 476

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 177/350 (50%), Gaps = 16/350 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D  +V +     G ++    + F      I  S    GR+ N  G+PID   
Sbjct: 43  GRVLEISTDRALVQVFEGTTGIDLENTKVRFLGKVLMIPVSRGLLGRIFNGRGEPIDDGP 102

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           ++   +  ++I        +R    +  +TGI  ID   P+  GQ++ +F+GSG+  + +
Sbjct: 103 AIIP-EKHLDINGYPINPYSRDYPSEFIQTGISTIDGMNPIVRGQKLPIFSGSGMPHNKM 161

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR      S     V+ + +G    E   F++D+     ++++V+ +  +D+  I 
Sbjct: 162 AAQIARQATVLGSQEGFAVVFAAMGITFEEASFFMDDFRRTGAIERAVMFLNLADDPAIE 221

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D +VL+IL  +T +  ++REI+    E+P  RGYP  ++++
Sbjct: 222 RITTPRLALTCAEYLAFELDMHVLVILTDMTNYCEALREISAARKEVPGRRGYPGYLYTD 281

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  + ER G     KG+IT +  + +  D+   PI D    I +G I+L+R L  +G YP
Sbjct: 282 LATMYERAGRLRGYKGSITQLPILTMPEDDITHPIPDLTGYITEGQIILSRGLHRKGIYP 341

Query: 350 PVDPLASVSRLADKAWSADEKK-----LVSSLTHLIHRFEETRDIRLIGG 394
           PVD L S+SRL DK    D+ +     L++ L     R +E +++ +I G
Sbjct: 342 PVDVLPSLSRLKDKGIGRDKTREDHADLLNQLFAAYARGKEAKELAVILG 391


>gi|170293977|gb|ACB13082.1| ATP synthase beta subunit [Ulva lactuca]
          Length = 366

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+DG +     + S+ I    P  ++       F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVLGEPVDGLEDAAHEN-SLPIHRSAPAFVDLDTQLSIFETGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GD 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINSN 139

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 140 NFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 199

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 200 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 257

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV--SSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E +
Sbjct: 258 AHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYTCAQNVKETLQRYKELQ 316

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 317 DIIAILG 323


>gi|119368038|dbj|BAF40532.1| ATP synthase beta subunit [Euonymus hamiltonianus var.
           sieboldianus]
          Length = 477

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +  ++ K  PA  +   +   F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---NLGPVDTRTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|113910772|gb|ABI48118.1| ATPase beta subunit [Ptilidium pulcherrimum]
          Length = 472

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+   +   +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|239624937|ref|ZP_04667968.1| H/transporting two-sector ATPase alpha/beta subunit central region
           [Clostridiales bacterium 1_7_47_FAA]
 gi|239521323|gb|EEQ61189.1| H/transporting two-sector ATPase alpha/beta subunit central region
           [Clostridiales bacterium 1_7_47FAA]
          Length = 457

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 160/312 (51%), Gaps = 18/312 (5%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S     R+ + +GKPIDG  D L +  + +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SEDMLSRMFDGMGKPIDGGPDILPEKRMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209
            L  GQ++ +F+ SG+  + L +  AR       S+ F  V+ + +G    E   F+E +
Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTSEPF-AVVFAAMGITFEEANFFMESF 198

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIR 267
                + +SV+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A S+R
Sbjct: 199 RETGAIDRSVMFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADSLR 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   PI D 
Sbjct: 259 EISAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILTMPEDDKTHPIPDL 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382
              I +G I+L+R L  +   PP+D L S+SRL DK        AD   +++ L     R
Sbjct: 319 TGYITEGQIILSRDLYRKNVTPPIDVLPSLSRLKDKGIGEGKTRADHADVMNQLFAAYAR 378

Query: 383 FEETRDIRLIGG 394
            ++ +++ +I G
Sbjct: 379 GKDAKELMVILG 390


>gi|56675678|emb|CAB63585.2| atp synthase beta subunit [Brassica balearica]
          Length = 499

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 174/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------IEDYL 210
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         + + L
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 225

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 226 NXAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|14717970|gb|AAK72727.1| ATP synthase beta subunit [Brassica balearica]
          Length = 475

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 174/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G D+V       +       GR
Sbjct: 28  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMDVVDMGNPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------IEDYL 210
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         + + L
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 203

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 204 NXAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 263

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 264 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 322 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 381

Query: 389 IRLIGG 394
           I  I G
Sbjct: 382 IIAILG 387


>gi|126700574|ref|YP_001089471.1| V-type ATP synthase subunit B [Clostridium difficile 630]
 gi|254976500|ref|ZP_05272972.1| V-type ATP synthase subunit B [Clostridium difficile QCD-66c26]
 gi|255093884|ref|ZP_05323362.1| V-type ATP synthase subunit B [Clostridium difficile CIP 107932]
 gi|255102066|ref|ZP_05331043.1| V-type ATP synthase subunit B [Clostridium difficile QCD-63q42]
 gi|255307934|ref|ZP_05352105.1| V-type ATP synthase subunit B [Clostridium difficile ATCC 43255]
 gi|255315637|ref|ZP_05357220.1| V-type ATP synthase subunit B [Clostridium difficile QCD-76w55]
 gi|255518297|ref|ZP_05385973.1| V-type ATP synthase subunit B [Clostridium difficile QCD-97b34]
 gi|255651415|ref|ZP_05398317.1| V-type ATP synthase subunit B [Clostridium difficile QCD-37x79]
 gi|255656878|ref|ZP_05402287.1| V-type ATP synthase subunit B [Clostridium difficile QCD-23m63]
 gi|260684474|ref|YP_003215759.1| V-type ATP synthase subunit B [Clostridium difficile CD196]
 gi|260688133|ref|YP_003219267.1| V-type ATP synthase subunit B [Clostridium difficile R20291]
 gi|296452285|ref|ZP_06893990.1| V-type ATP synthase, subunit B [Clostridium difficile NAP08]
 gi|296877636|ref|ZP_06901666.1| V-type ATP synthase, subunit B [Clostridium difficile NAP07]
 gi|306521244|ref|ZP_07407591.1| V-type ATP synthase subunit B [Clostridium difficile QCD-32g58]
 gi|123174108|sp|Q184E3|VATB_CLOD6 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|115252011|emb|CAJ69847.1| V-type ATP synthase beta chain (V-type ATPase subunit B)
           [Clostridium difficile]
 gi|260210637|emb|CBA65316.1| V-type sodium ATP synthase subunit B [Clostridium difficile CD196]
 gi|260214150|emb|CBE06368.1| V-type sodium ATP synthase subunit B [Clostridium difficile R20291]
 gi|296258888|gb|EFH05778.1| V-type ATP synthase, subunit B [Clostridium difficile NAP08]
 gi|296431397|gb|EFH17214.1| V-type ATP synthase, subunit B [Clostridium difficile NAP07]
          Length = 457

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 146/280 (52%), Gaps = 11/280 (3%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           F +SP     GRV + +G+PIDG   +   D  ++I         R    +  +TG+  I
Sbjct: 79  FGVSPD--ILGRVFSGMGRPIDGGPEIIP-DKRLDINGAPINPAARDYPAEFIQTGVSAI 135

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFI 206
           D    L  GQ++ +F+GSG+  + L    AR      +D    V+ + VG    +   FI
Sbjct: 136 DGLNTLVRGQKLPIFSGSGLPHANLAVQIARQAKVRGTDSKFAVVFAAVGITFEDAEFFI 195

Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
            D+     + +SVV V  +++  + R   P  A+T AEY + + D +VL+I+  IT +A 
Sbjct: 196 SDFKATGAIDRSVVFVNLANDPAVERVSTPRMALTAAEYLAFEQDMHVLVIITDITNYAE 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++RE++    E+P  RGYP  ++++L  + ER G  +  +G+IT +  + +  D+   PI
Sbjct: 256 ALREVSAAKKEVPGRRGYPGYLYTDLATMYERAGKMKGHEGSITMIPILTMPEDDKTHPI 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            D    I +G I+L+R L ++   PP+D L S+SRL DK 
Sbjct: 316 PDLTGYITEGQIILSRELYKKDIQPPIDVLPSLSRLKDKG 355


>gi|169261005|gb|ACA52102.1| ATP synthase beta subunit [Saccoloma inaequale]
          Length = 290

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 145/283 (51%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  L+  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVENSLTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283


>gi|71902796|ref|YP_279599.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS6180]
 gi|123747806|sp|Q48VL2|VATB_STRPM RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|71801891|gb|AAX71244.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes
           MGAS6180]
          Length = 471

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L D  +H G+     GQV+ +  D  +V +     G  ++   + F      ++ S
Sbjct: 27  HYNELVDITLHNGERRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ + +G PIDG   L   +  ++I  +    + R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFDGMGHPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY +  KG +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L++ L + G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357


>gi|57868962|gb|AAW57477.1| ATP synthase beta subunit [Shortia uniflora]
          Length = 489

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|299830346|ref|YP_003734561.1| ATP synthase CF1 beta subunit [Kryptoperidinium foliaceum]
 gi|297385048|gb|ADI40346.1| ATP synthase CF1 beta subunit [Kryptoperidinium foliaceum]
          Length = 475

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N +G+P+D  GD S    D ++ I    P     +     F+TGI+V+D+  P  
Sbjct: 91  LGRIFNVIGEPVDEQGDVSY---DETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYR 147

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+       
Sbjct: 148 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 206

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N  +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 207 NENNFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 266

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 267 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 324

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL R LA +G YP VDPL S S +      S    ++  S+   + R++E
Sbjct: 325 TTFAHLDATTVLARGLAAKGIYPAVDPLDSTSTMLQPGIVSETHYEVAESVKETLQRYKE 384

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 385 LQDIIAILG 393


>gi|190893716|ref|YP_001980258.1| H(+)-transporting ATP synthase, beta subunit [Rhizobium etli CIAT
           652]
 gi|226740664|sp|B3PQ68|ATPB_RHIE6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190698995|gb|ACE93080.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium
           etli CIAT 652]
          Length = 475

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I    P  + +    +   TGI+V+D+  P   G
Sbjct: 90  LGRIMNVIGEPVDEAGPLNTAH-KRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARG 148

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     +
Sbjct: 149 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 207

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 208 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 267

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   +  
Sbjct: 268 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 326 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 385

Query: 389 IRLIGG 394
           I  I G
Sbjct: 386 IIAILG 391


>gi|34420370|gb|AAQ67427.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420372|gb|AAQ67428.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420374|gb|AAQ67429.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420376|gb|AAQ67430.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420378|gb|AAQ67431.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420380|gb|AAQ67432.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420382|gb|AAQ67433.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420384|gb|AAQ67434.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420386|gb|AAQ67435.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420388|gb|AAQ67436.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420390|gb|AAQ67437.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420392|gb|AAQ67438.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420394|gb|AAQ67439.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420396|gb|AAQ67440.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420398|gb|AAQ67441.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420400|gb|AAQ67442.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420402|gb|AAQ67443.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420404|gb|AAQ67444.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420406|gb|AAQ67445.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420408|gb|AAQ67446.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420410|gb|AAQ67447.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420412|gb|AAQ67448.1| ATP synthase beta [Drosophila melanogaster]
 gi|34420416|gb|AAQ67450.1| ATP synthase beta [Drosophila melanogaster]
          Length = 379

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 149/285 (52%), Gaps = 16/285 (5%)

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178
           D +  I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+    
Sbjct: 12  DKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 71

Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILR 231
           +  A++     V    VGER RE      E IE     L D   K  +V    +E P  R
Sbjct: 72  NNVAKAHGGYSVFAG-VGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGAR 130

Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 131 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 190

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP 
Sbjct: 191 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 248

Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VDPL S SR+ D      E   V+  +  ++  ++  +DI  I G
Sbjct: 249 VDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILG 293


>gi|46360720|gb|AAS89141.1| ATP synthase beta subunit [Sphaerocarpos texanus]
          Length = 382

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|3929531|gb|AAC79943.1| ATP synthase beta subunit [Anisoptera marginata]
          Length = 447

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G  V   G     P      GR
Sbjct: 24  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGALLSVPVGGLTLGR 83

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D  +   + +  PA  R   +   F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPID---NLGPVDTDTTSPIHRPAPAFIRLATKLSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 201 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|333030305|ref|ZP_08458366.1| ATP synthase subunit beta [Bacteroides coprosuis DSM 18011]
 gi|332740902|gb|EGJ71384.1| ATP synthase subunit beta [Bacteroides coprosuis DSM 18011]
          Length = 506

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+ IDG  SL + D +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGESIDGLSSLDRED-AYPIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  R + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKRLNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---- 245
           GD  KKS+                     +V    +E P  R    L+ +T+AE F    
Sbjct: 210 GDEFKKSMEAGHWDLSKVDYDEVAKSQATLVFGQMNEPPGARSSVALSGLTVAESFRDMA 269

Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   ++L  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +    
Sbjct: 270 AQTGSKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERIASTRN-- 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITEMGIYPAVDPLESSSRILDPH 387

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
                  +    ++ ++ R +E +DI
Sbjct: 388 IVGKAHYETAQRVSQILQRNKELQDI 413


>gi|104|emb|CAA29094.1| beta-subunit [Bos taurus]
          Length = 357

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P+  G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 14  TGIKVVDLLAPIAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 72

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 73  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 132

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 133 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 190

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 191 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 250

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 251 RGVQKILQDYKSLQDIIAILG 271


>gi|3023341|sp|O03069|ATPB_EQUAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1934690|gb|AAB51732.1| ATP synthase beta chain [Equisetum arvense]
          Length = 473

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + + +  I    P  M+ +     F+TGI+V+D+  P  
Sbjct: 107 LGRIFNVLGEPVD---NMGPVEATAKSPIHKPAPAFMDLETTVSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 223

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 224 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R++E
Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL-QPWIVGEEHYEVAQGVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|212896662|gb|ACJ38534.1| membrane-bound ATP synthase subunit B [Galactia striata]
          Length = 470

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 22/304 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 90  LGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 146

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESGVI 205

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  + 
Sbjct: 206 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +  +    DE  +    +   + R++E
Sbjct: 324 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRWIVGDEHYETAQRVKQTLQRYKE 383

Query: 386 TRDI 389
            +DI
Sbjct: 384 LQDI 387


>gi|126466064|ref|YP_001041173.1| V-type ATP synthase subunit B [Staphylothermus marinus F1]
 gi|171770012|sp|A3DNQ5|VATB_STAMF RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|126014887|gb|ABN70265.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Staphylothermus marinus F1]
          Length = 469

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 169/336 (50%), Gaps = 26/336 (7%)

Query: 43  VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA 99
           V  G+ V V  G     LGQVI ++ D   I   G   +I L    + +     ++  S 
Sbjct: 30  VSYGEVVEVVLGSGETRLGQVIDVSRDATIIQVFGGVSDIDLKISKVRYRGETLKLPVSI 89

Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
              GR+ + LG+PIDG      +D L      +   S++PP+       +  +TGI  ID
Sbjct: 90  DMLGRIFDGLGRPIDGGPPIVPEDYLDINGSPINPASRLPPS-------EFIETGISAID 142

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206
               +  GQ++ +F+GSG+  + + +   R        + F  V+ + +G    +   FI
Sbjct: 143 GLNSIVRGQKLPIFSGSGLPHNRIAAQIVRQARVRGKEEKF-AVVFAAIGVSYDDAMFFI 201

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           E++      ++ V    + +SP++ ++A P  A+T AE+ + K D +VL IL  +T +  
Sbjct: 202 ENFKNYGALENAVAFINTADSPVIERIAIPRIALTAAEFLAWKHDMHVLAILTDMTNYCE 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++RE++    E+P  RGYP  ++++L  + ER G  E +KG++T +  + +  D+   PI
Sbjct: 262 ALRELSAAREEVPSRRGYPGYMYTDLATIYERAGRVEGKKGSVTQMPILTMPNDDITHPI 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G +VL+R L  +G YPP D L S+SRL
Sbjct: 322 PDLTGYITEGQLVLSRQLWLKGIYPPFDILMSLSRL 357


>gi|86742388|ref|YP_482788.1| F0F1 ATP synthase subunit beta [Frankia sp. CcI3]
 gi|118573536|sp|Q2J6N3|ATPB_FRASC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86569250|gb|ABD13059.1| ATP synthase F1 subcomplex beta subunit [Frankia sp. CcI3]
          Length = 479

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 153/298 (51%), Gaps = 10/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V N LG P+D      + +    I    P     +   + F TGI+VID+  P   G 
Sbjct: 105 GHVFNVLGTPLDVKQI--EAETYWPIHRSAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 162

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218
           +IG+F G+G+GK+ ++    R  +  F  V + + VGER RE  + F+E      ++ + 
Sbjct: 163 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L A+T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 223 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDATTV 340

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           L+R++++ G YP V PL S SR+ D  +   E       +  ++ R+++ +DI  I G
Sbjct: 341 LDRAISDLGIYPAVSPLDSNSRILDARYLGQEHYDTAREVQRILQRYKDLQDIIAILG 398


>gi|57868960|gb|AAW57476.1| ATP synthase beta subunit [Shortia soldanelloides]
          Length = 493

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 161/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 101 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLAP 157

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 158 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 216

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQR 393

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 394 YKELQDIIAILG 405


>gi|330850637|ref|YP_004376518.1| ATP synthase CF1 beta subunit [Ptilidium pulcherrimum]
 gi|302024766|gb|ADK89612.1| ATP synthase CF1 beta subunit [Ptilidium pulcherrimum]
          Length = 492

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 220 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+   +   +   + R+
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQGVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|209963710|ref|YP_002296625.1| ATP synthase F1, alpha subunit [Rhodospirillum centenum SW]
 gi|209957176|gb|ACI97812.1| ATP synthase F1, alpha subunit [Rhodospirillum centenum SW]
          Length = 520

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 161/342 (47%), Gaps = 7/342 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + ++ D +    +G G  +S G  V   G   R+       GRV++ LG+P+DG   
Sbjct: 64  GLAMTLDRDTIGCVLLGDGARLSAGGTVHGSGAIVRVPVGPGLLGRVLDPLGRPLDGGPP 123

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                L+  +    P    R  V +   TG+ V+D   P+  GQR  +      GK+ L 
Sbjct: 124 PHASRLN-PVERPAPAIAERAEVTQPLHTGLTVVDAMFPIGRGQRELIIGDRATGKTALA 182

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAP 235
             +M A+ D     I + + ++   VRE +E    G  L++S+VVVA+ D  P L+ +AP
Sbjct: 183 LDAMLAQRDGDVVCIYAAIAQKASSVREVVEALRAGGMLERSIVVVASPDAPPGLQWLAP 242

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A+T+AE+F   G + L++LD +T+ A   R+IA    + P    +P  VF    RLLE
Sbjct: 243 YAAMTMAEFFRDSGGHALVVLDDLTKHAAIHRQIALLLRQPPGREAFPGDVFYLHSRLLE 302

Query: 296 RIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R       +  G++TA+        N +  I  ++ SI DG IVL+  L  +G+ P VD 
Sbjct: 303 RSAKLSDAQGGGSLTALPVAETLAGNLSAYIPTNLISITDGQIVLDTKLFHQGQKPAVDV 362

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
             SVSR+  K  S   + L  SL     +F E       GG 
Sbjct: 363 GRSVSRVGGKTQSRSLRPLAESLRLDYAQFAELEAFTRFGGM 404


>gi|157502840|gb|ABV58386.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502843|gb|ABV58388.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502846|gb|ABV58390.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502849|gb|ABV58392.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502852|gb|ABV58394.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502855|gb|ABV58396.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502858|gb|ABV58398.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502861|gb|ABV58400.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502864|gb|ABV58402.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502867|gb|ABV58404.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502870|gb|ABV58406.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502873|gb|ABV58408.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502876|gb|ABV58410.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502882|gb|ABV58414.1| ATP synthase CF1 beta subunit [Lobelia roughii]
 gi|157502885|gb|ABV58416.1| ATP synthase CF1 beta subunit [Lobelia roughii]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   ++   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|77921155|gb|ABB05343.1| AtpD [Micavibrio sp. EPB]
          Length = 425

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 16/304 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ +G PID +           I    P  +++    +   TGI+V+D+  P   G 
Sbjct: 67  GRILDVIGNPID-NLPAPNAKKRYPIHRPAPEFVDQATEAEQLVTGIKVVDLLCPYLKGG 125

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+     L++  A+      V    VGER RE  +   + +       D
Sbjct: 126 KIGLFGGAGVGKTVTIQELINNIAKGHGGVSVFAG-VGERTREGNDLYHEMMDAGVIKLD 184

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LT +++AEYF   +G +VL  +D++ RF  +  E++ 
Sbjct: 185 GESKVGLVFGQMNEPPGARARVALTGLSMAEYFRDEEGQDVLFFMDNVFRFTQAGAEVSA 244

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +  S 
Sbjct: 245 LLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSH 302

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R +AE G YP VDPL S SR+ D     +E  K  + +   +  ++  +DI 
Sbjct: 303 LDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYKCAADVQKTLQTYKALQDII 362

Query: 391 LIGG 394
            I G
Sbjct: 363 AILG 366


>gi|20467405|gb|AAL27833.1| ATPase beta subunit [Thujopsis dolabrata]
          Length = 452

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TG
Sbjct: 67  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETG 123

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 124 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 182

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 183 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +   
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 360

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 361 GVKQTLQRYKELQDIIAILG 380


>gi|157502825|gb|ABV58376.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007]
 gi|157502828|gb|ABV58378.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007]
 gi|157502831|gb|ABV58380.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007]
 gi|157502834|gb|ABV58382.1| ATP synthase CF1 beta subunit [Lobelia linnaeoides]
 gi|157502837|gb|ABV58384.1| ATP synthase CF1 beta subunit [Lobelia linnaeoides]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   ++   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|153805610|ref|YP_001382193.1| ATP synthase CF1 beta subunit [Leptosira terrestris]
 gi|190358675|sp|A6YGB6|ATPB_LEPTE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134270141|gb|ABO69330.1| CF1 beta subunit of ATP synthase [Leptosira terrestris]
          Length = 482

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 157/306 (51%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ +D   ++G     + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 98  GRIFNVLGETVDNLGTVGNKQ-GLPIHRPAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GDN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINAEN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 217 LSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W  S +  +   ++   + R++E +D
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVSKEHYECAQNVKQTLQRYKELQD 393

Query: 389 IRLIGG 394
           I  I G
Sbjct: 394 IIAILG 399


>gi|111283728|gb|ABH09214.1| ATPase beta subunit [Neogrollea notabilis]
          Length = 443

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 59  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 115

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 116 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 175

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 176 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 235

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 236 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 293

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 294 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 352

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 353 KELQDIIAILG 363


>gi|305671655|gb|ADM63137.1| ATP synthase beta subunit [Valeriana jatamansi]
          Length = 489

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDKHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|183206640|gb|ACC54518.1| ATP synthase beta subunit [Wahlenbergia linifolia]
          Length = 470

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+ ID    +  G  S  I    P  ++       F+TGI+V+D+  P 
Sbjct: 86  GATLGRIFNVLGETIDNLGPVDTGTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +
Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGV 203

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 204 INEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++
Sbjct: 322 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYK 381

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 382 ELQDIITILG 391


>gi|20269406|gb|AAM17930.1| ATP synthase beta subunit [Diapensia lapponica]
          Length = 470

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|325695308|gb|EGD37208.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK150]
          Length = 464

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 162/326 (49%), Gaps = 15/326 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGHPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
            +GKPIDG  D L +  L ++  +  P A  R   ++  +TGI  ID    L  GQ++ V
Sbjct: 94  GMGKPIDGGPDILPEKYLDIDGQAINPIA--RDYPDEFIQTGISAIDHLNTLVRGQKLPV 151

Query: 167 FAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           F+GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+
Sbjct: 152 FSGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVL 211

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278
            +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P 
Sbjct: 212 FINLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPG 271

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L
Sbjct: 272 RRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIIL 331

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA 364
           +R L   G  PP++ L S+SRL DK 
Sbjct: 332 SRDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|193216470|ref|YP_001999712.1| F0F1 ATP synthase subunit alpha [Mycoplasma arthritidis 158L3-1]
 gi|226739913|sp|B3PLV6|ATPA_MYCA5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|193001793|gb|ACF07008.1| ATP synthase alpha subunit [Mycoplasma arthritidis 158L3-1]
          Length = 527

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 165/336 (49%), Gaps = 13/336 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           LG  + +  D+V I  +G    I  G+LV    +   +P      GRV+NAL KPIDG  
Sbjct: 60  LGMTMNLEEDLVGIVVMGDDRSIVEGNLVKRMRQVISTPVGDELLGRVVNALAKPIDGK- 118

Query: 118 SLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             GK + S    I    P  M RQ V +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 --GKINTSYHAPIFKVAPGVMARQEVNEPLETGILAIDAMIPIGKGQRELIIGDRQTGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG--DNLKKSVVVVATSDESPILR 231
            +   ++  +       I   +G++   + + + D L   D LK + ++ A++ ES  L+
Sbjct: 177 AIAIDTILNQKGKHVYCIYIAIGQKNSTISQIV-DILNKHDALKYTTIISASAAESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTIAE + +KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYTGVTIAEEWMAKGKDVLVIYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER     KE   G+ITA+  +    ++ +  I  +V SI DG I    SL   G+ P
Sbjct: 296 QLLERAARLNKENGGGSITALPIIETQAEDISAYIPTNVISITDGQIFTKESLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +D   SVSR+   A +   KK+VSSL   + ++ E
Sbjct: 356 AIDIGYSVSRVGSAAQTKLMKKVVSSLKLELAQYNE 391


>gi|71277376|gb|AAZ29868.1| ATP synthase beta subunit [Chara zeylanica]
          Length = 349

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 212 -DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 EENICESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|139522556|gb|ABO77667.1| ATP synthase beta subunit [Lysipomia sphagnophila]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  +
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRESGV 221

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
            +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 222 INEKKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +   ++   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEAAQNVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIITILG 409


>gi|159042997|ref|YP_001531791.1| ATP synthase F1 subunit alpha [Dinoroseobacter shibae DFL 12]
 gi|190358142|sp|A8LN46|ATPA1_DINSH RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|157910757|gb|ABV92190.1| ATP synthase F1, alpha subunit [Dinoroseobacter shibae DFL 12]
          Length = 509

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 5/323 (1%)

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +++G+ V   GR    P      GRV++ALG+P D  D +    L+  + ++ P
Sbjct: 79  LGPSQNVAMGEDVRRTGRVVSVPVGPATLGRVVDALGRPRDERDPVTDSPLA-PVEAEAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVI 191
             ++R  V +   TG++ +D   P+  GQR  +      GK+++   ++  + D     I
Sbjct: 138 DILSRTPVSRPLATGLKAVDAAVPVGLGQRQLIIGDRQTGKTSIAVDTILNQKDTGVICI 197

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDE-SPILRKMAPLTAVTIAEYFSSKGD 250
              +G+RG  V + I    G  +    VV+A  DE +P L  +AP  A+++AE F+++G 
Sbjct: 198 YCAIGQRGDAVAKVIGALQGGEMLGQTVVIAAGDEDAPGLAYIAPYAAMSVAESFAAQGR 257

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL++LD +T  A + RE++      P    +P  +F    RLLER G   +  G+ITA+
Sbjct: 258 DVLVVLDDLTHHARTYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFGEGAGSITAL 317

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             V    +N +  I  ++ SI DG I L+  L    ++P VD   SVSR+  KA +   +
Sbjct: 318 PVVETQAENLSAYIPTNLISITDGQIYLSPKLVRTNQFPAVDLGVSVSRVGGKAQARAFR 377

Query: 371 KLVSSLTHLIHRFEETRDIRLIG 393
            +  +L   + +FEE  +    G
Sbjct: 378 AVGGNLRVTLSQFEELEEFARFG 400


>gi|4995183|emb|CAB44042.1| H(+)-transporting ATP synthase [Hermannia erodioides]
          Length = 484

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 39  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I  + P  +        F+TGI+V+D+  P   G 
Sbjct: 99  IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 215

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 216 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 275

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 276 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 333

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 334 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 393

Query: 390 RLIGG 394
             I G
Sbjct: 394 IAILG 398


>gi|86359451|ref|YP_471343.1| F0F1 ATP synthase subunit beta [Rhizobium etli CFN 42]
 gi|118573730|sp|Q2K3H0|ATPB_RHIEC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86283553|gb|ABC92616.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium
           etli CFN 42]
          Length = 475

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I    P  + +    +   TGI+V+D+  P   G
Sbjct: 90  LGRIMNVIGEPVDEAGPLNTAH-KRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     +
Sbjct: 149 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 207

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 208 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 267

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   +  
Sbjct: 268 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 326 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 385

Query: 389 IRLIGG 394
           I  I G
Sbjct: 386 IIAILG 391


>gi|116009025|gb|ABJ52181.1| AtpB [Phyllostachys edulis]
          Length = 495

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P +R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 219 VINEKNIEESKVALVYGQMNEPPGVRMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|113910878|gb|ABI48171.1| ATPase beta subunit [Rhizogonium paramattense]
          Length = 456

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 164/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 69  LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 184

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 185 NEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 244

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 245 SEVSASLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 302

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 303 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 361

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 362 ELQDIIAILG 371


>gi|83592562|ref|YP_426314.1| F0F1 ATP synthase subunit beta [Rhodospirillum rubrum ATCC 11170]
 gi|114564|sp|P05038|ATPB_RHORU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573735|sp|Q2RV18|ATPB_RHORT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|46368|emb|CAA26340.1| unnamed protein product [Rhodospirillum rubrum]
 gi|83575476|gb|ABC22027.1| ATP synthase F1, beta subunit [Rhodospirillum rubrum ATCC 11170]
          Length = 474

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 152/306 (49%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    +        I  + P    +    +   TGI+VID+  P   G
Sbjct: 87  LGRIMNVIGEPVDERGPVVTAQ-RYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKG 145

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE----DYL 210
            ++G+F G+G+GK+ L+     +         + + VGER RE      E I+    D  
Sbjct: 146 GKVGLFGGAGVGKTVLIQELINNVAKGHGGYSVFAGVGERTREGNDLYHEMIDAGIIDLE 205

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
           GD   K  +V    +E P  R    L  +T AEYF   +G +VL  +D+I RF  +  E+
Sbjct: 206 GDK-SKVALVYGQMNEPPGARARVALAGLTQAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAASF 322

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD    LNRS+AE G YP VDPL S SR  D     +E  K+   +  ++  ++  +D
Sbjct: 323 AHLDATTTLNRSIAELGIYPAVDPLDSTSRALDPLVVGEEHYKVAREVQRVLQTYKSLQD 382

Query: 389 IRLIGG 394
           I  I G
Sbjct: 383 IIAILG 388


>gi|15827576|ref|NP_301839.1| F0F1 ATP synthase subunit beta [Mycobacterium leprae TN]
 gi|221230053|ref|YP_002503469.1| F0F1 ATP synthase subunit beta [Mycobacterium leprae Br4923]
 gi|1168578|sp|P45823|ATPB_MYCLE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|699347|gb|AAA63108.1| atpD [Mycobacterium leprae]
 gi|13093126|emb|CAC31526.1| ATP synthase [beta] chain [Mycobacterium leprae]
 gi|219933160|emb|CAR71240.1| ATP synthase [beta] chain [Mycobacterium leprae Br4923]
          Length = 485

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 160/301 (53%), Gaps = 15/301 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLC 159
           G V NALG  +D     G GD      + + PP+      R E   +TG++V+D+ TP  
Sbjct: 106 GHVFNALGYCLD---EPGYGDEFEHWSIHRKPPSFEELEPRTEM-LETGLKVVDLLTPYV 161

Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215
            G +I +F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E    + LK
Sbjct: 162 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLK 221

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSG 274
            + +V    DE P  R    L+A+T+AE+F  +   +VLL +D+I RF  +  E++T  G
Sbjct: 222 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLG 281

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+  L ERI  +     +IT++ +V V  D++ DP   +  + LD 
Sbjct: 282 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 339

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
              L+RS+  +G +P VDPLAS S + D     +E  ++   +  ++ R+++ +DI  I 
Sbjct: 340 TTELSRSVFAKGIFPAVDPLASSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAIL 399

Query: 394 G 394
           G
Sbjct: 400 G 400


>gi|288928045|ref|ZP_06421892.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330879|gb|EFC69463.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 509

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +GKPIDG       +L+ME    I  + P        ++   TGI+VID+  P 
Sbjct: 95  GRMLNVIGKPIDG-----MSELNMEGAYPIHREAPKFDELSTHKEMLATGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE  + I D +     
Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVI 209

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247
             GD  +K++                     +V    +E P  R    L+ +T+AE F  
Sbjct: 210 RYGDKFRKAMEEGKWDLSLVDPEELRQSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269

Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            G       +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 270 HGGKDGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ 
Sbjct: 328 TKRGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D      E  +    +  ++ R++E +DI  I G
Sbjct: 388 DPLIVGKEHYECAQRVKQILQRYKELQDIIAILG 421


>gi|183206694|gb|ACC54545.1| ATP synthase beta subunit [Campanula scouleri]
          Length = 477

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXNGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIITILG 388


>gi|113910844|gb|ABI48154.1| ATPase beta subunit [Diphyscium foliosum]
          Length = 448

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 183 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|34420418|gb|AAQ67451.1| ATP synthase beta [Drosophila simulans]
 gi|34420420|gb|AAQ67452.1| ATP synthase beta [Drosophila simulans]
 gi|34420422|gb|AAQ67453.1| ATP synthase beta [Drosophila simulans]
 gi|34420424|gb|AAQ67454.1| ATP synthase beta [Drosophila simulans]
 gi|34420426|gb|AAQ67455.1| ATP synthase beta [Drosophila simulans]
          Length = 376

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 149/285 (52%), Gaps = 16/285 (5%)

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178
           D +  I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+    
Sbjct: 12  DKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 71

Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILR 231
           +  A++     V    VGER RE      E IE     L D   K  +V    +E P  R
Sbjct: 72  NNVAKAHGGYSVFAG-VGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGAR 130

Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 131 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 190

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP 
Sbjct: 191 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 248

Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VDPL S SR+ D      E   V+  +  ++  ++  +DI  I G
Sbjct: 249 VDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILG 293


>gi|7708321|emb|CAB90087.1| ATP synthase beta subunit [Guaiacum sanctum]
          Length = 475

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 90  GVTLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|46360677|gb|AAS89120.1| ATP synthase beta subunit [Herbertus alpinus]
          Length = 382

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|195183507|dbj|BAG66967.1| ATP synthase beta subunit [Hybanthus galeottii]
          Length = 489

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|184127843|gb|ACC67821.1| ATP synthase beta chain [Christensenia aesculifolia]
          Length = 402

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 15  LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQSDTKLSIFETGIKVVDLLAPYRR 72

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 73  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 193 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 310 QDIIAILG 317


>gi|123966850|ref|YP_001011931.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9515]
 gi|166201726|sp|A2BYG3|ATPB_PROM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123201216|gb|ABM72824.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9515]
          Length = 486

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   D +  I    P   + +   K F+TGI+VID+  P  
Sbjct: 97  ATLGRIFNVLGEPVDEQGPVKTSD-TAPIHRSAPKLTDLETKPKVFETGIKVIDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210
            G ++G+F G+G+GK+ L+     +   +     +   VGER RE  +  E++       
Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215

Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            ++L +S V +     +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 216 AEDLSQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL R LA +G YP VDPL S S +   +   D+  K   ++   + R++E 
Sbjct: 334 TFAHLDATTVLARGLAAKGIYPAVDPLDSTSTMLQPSVVGDDHYKTARAVQSTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|21673859|ref|NP_661924.1| F0F1 ATP synthase subunit beta [Chlorobium tepidum TLS]
 gi|81860080|sp|Q8KDL4|ATPB1_CHLTE RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|21646993|gb|AAM72266.1| ATP synthase F1, beta subunit [Chlorobium tepidum TLS]
          Length = 480

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 153/293 (52%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           R+ +  G  ID    +   +++   +   PP ++R+  +   F+TGI++ID+  PL  G 
Sbjct: 91  RMFDVFGNAIDRRGPVT--NVTWRSVHGAPPQLSRRSTKSEVFETGIKIIDLLVPLERGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ LL+    +    +  +S+   +GER RE  E   D      L   V
Sbjct: 149 KAGLFGGAGVGKTVLLTEMIHNMVSKESGVSIFCGIGERCREGEELYRDMSEAGVLDNMV 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LTA+T+AEYF       VLL++D+I RF  +  EI+   G++P
Sbjct: 209 MVFGQMNEPPGSRFRVGLTALTMAEYFRDDLHQEVLLLIDNIFRFIQAGSEISGMIGQMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL  L ERI  +    G IT++ +V V  D+  DP A    S L   +V
Sbjct: 269 SRLGYQPTIGTELSALEERI--ANTGTGAITSIQAVYVPADDFTDPAAVHTFSHLSASLV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP VDPL+S S++A ++        L   +  ++ ++ E +DI
Sbjct: 327 LSRKRAGEGFYPAVDPLSSGSKMAGESIVGRRHYDLAREVRRVLAQYAELKDI 379


>gi|328871057|gb|EGG19428.1| ATP synthase beta chain [Dictyostelium fasciculatum]
          Length = 656

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 171/342 (50%), Gaps = 20/342 (5%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +IV    + I + ++ G  V + G   ++       GR++N +G+PIDG   +   D  +
Sbjct: 154 NIVRCVALEITDGLARGTTVLNTGAPLKVPVGRPTLGRIMNVIGEPIDGRGPI-ISDTYL 212

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----A 182
            I  + P             TGI+VID+ TP   G +IG+F G+G+GK+ L+       A
Sbjct: 213 PIWREPPRFDELAPSASILVTGIKVIDLLTPYARGGKIGLFGGAGVGKTVLIQELINNVA 272

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMA 234
           +S     V    VGER RE  +   + +        G+  K S+V     +E P  R   
Sbjct: 273 KSHGGFSVFAG-VGERTREGNDLWNEMITAGVIKLDGEGSKVSLVF-GQMNEPPGARARV 330

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +++  +
Sbjct: 331 TLTGLTVAEYFRDVENQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGSM 390

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VDP
Sbjct: 391 QERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAVSELGIYPAVDP 448

Query: 354 LASVSRLADKAWSADEKKLV-SSLTHLIHRFEETRDIRLIGG 394
           L S S + D      E   V +S+  ++  ++  +DI  I G
Sbjct: 449 LDSTSLMLDPNIIGQEHYTVATSVQKILQEYKGLQDIIAILG 490


>gi|330928210|ref|XP_003302169.1| hypothetical protein PTT_13892 [Pyrenophora teres f. teres 0-1]
 gi|311322642|gb|EFQ89755.1| hypothetical protein PTT_13892 [Pyrenophora teres f. teres 0-1]
          Length = 517

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G+PID    + K      I +  P    +    +   TGI+V+D+  P   G
Sbjct: 129 LGRIMNVTGEPIDERGPI-KATKYAPIHADPPEFTEQSTSAEVLVTGIKVVDLLAPYARG 187

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 188 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYHEMQETSVIQL 246

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
           D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++
Sbjct: 247 DGDSKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 306

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 307 ALLGRIPSAVGYQPTLAIDMGIMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 364

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 365 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVIGEDHYNTATRVQQILQEYKSLQDI 424

Query: 390 RLIGG 394
             I G
Sbjct: 425 IAILG 429


>gi|157689152|gb|ABV65132.1| ATP synthase CF1 beta subunit [Euonymus americanus]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +  ++ K  PA  +   +   F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|126644128|ref|XP_001388200.1| ATP synthase beta chain, mitochondrial precursor [Cryptosporidium
           parvum Iowa II]
 gi|126117273|gb|EAZ51373.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Cryptosporidium parvum Iowa II]
          Length = 540

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 169/342 (49%), Gaps = 39/342 (11%)

Query: 77  IGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
           + E +S G+ V   G     P      GR++N +G  IDG   +    +   I    P  
Sbjct: 115 VTEGLSRGEKVIDTGSPICVPVGKATLGRMVNVMGNAIDGCGEI-NAKVKKPIHRTAPEY 173

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS----------- 184
           M +        TGI+ ID+ TP   G +IG+F G+G+GK+ L+     +           
Sbjct: 174 MEQVMEPSLIVTGIKAIDLLTPFIKGGKIGLFGGAGVGKTVLIMELINNIAKKYGGYSVY 233

Query: 185 -----------DCFDKVII------SLVGER--GREVREFIEDYLGDNLKKSVVVVATSD 225
                      D +++++       S+VG R   +  R+ I D+LG    K+ +V    +
Sbjct: 234 TGVGERIREGYDLYNEMLANGVNKKSIVGSRVDSKHKRQPIYDFLGS---KTALVYGQMN 290

Query: 226 ESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E+P  R    LT +T+AEYF  S   +VL  +D+I RF  +  E++   G LP   GY  
Sbjct: 291 ETPGARARVALTGLTMAEYFRDSMMQDVLFFVDNIYRFTQAGSEVSALLGLLPTEIGYQP 350

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ ++L +L ERI  +  + G+IT++ ++ +  D+ NDP   +  + LD  IVL+R ++E
Sbjct: 351 TLATDLGKLQERI--TTTKNGSITSIQALYIPSDDINDPAPVAAFTHLDSTIVLSRKMSE 408

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEE 385
            G +P +DPL S S++ D+    +E   VS+ +  ++ R+++
Sbjct: 409 VGIFPSIDPLESRSKVLDRNIIGEEHYKVSTEVLSILQRYKQ 450


>gi|20467401|gb|AAL27831.1| ATPase beta subunit [Thuja plicata]
          Length = 448

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TG
Sbjct: 63  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTKSPIHRSAPAFTQLDTKFSIFETG 119

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 120 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 178

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 179 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 238

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 239 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 296

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +   
Sbjct: 297 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 356

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 357 GVKQTLQRYKELQDIIAILG 376


>gi|157502879|gb|ABV58412.1| ATP synthase CF1 beta subunit [Lobelia arnhemiaca]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   ++   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|71277380|gb|AAZ29870.1| ATP synthase beta subunit [Nitella acuminata]
          Length = 353

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|157488193|gb|ABV57773.1| ATP synthase CF1 beta subunit [Isotoma fluviatilis subsp.
           fluviatilis]
          Length = 498

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   ++   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|37543311|gb|AAL92720.1| ATP synthase beta subunit [Coleochaete sp. 201d1]
          Length = 402

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D + +  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDTTKVSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INADNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|289596935|ref|YP_003483631.1| H(+)-transporting two-sector ATPase [Aciduliprofundum boonei T469]
 gi|289534722|gb|ADD09069.1| H(+)-transporting two-sector ATPase [Aciduliprofundum boonei T469]
          Length = 459

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 170/330 (51%), Gaps = 14/330 (4%)

Query: 43  VCLGDFVVHQGKN-SDNLGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA 99
           V  G+ V  +G +  + LGQV+  R N+ IV +     G ++    + F     +I  S 
Sbjct: 24  VAYGEVVKIRGPDGKERLGQVLEARENMAIVQVFEGTRGLDVKSTTVKFLGETLKIGVSL 83

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV +  G+PIDG   +   ++       + P+  R+   +  +TGI  ID    L 
Sbjct: 84  EMLGRVFDGTGRPIDGGPDIIPEEMRDINGYPINPSA-REYPREFIQTGISTIDGMNTLV 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDY-LG 211
            GQ++ +F+GSG+  + + +  AR        + F  V +++ G    E   F +++   
Sbjct: 143 RGQKLPIFSGSGMPHNEIAAQIARQAKLRGKGEKFAVVFVAM-GITAEEANFFRKEFERT 201

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             L+++V+ +  +++  I R + P   +T+AEY +   D +VL+IL  +T +  ++REI+
Sbjct: 202 GALERTVLFLNLANDPAIERIVIPRMGLTVAEYLAYAKDMHVLVILTDMTNYCEALREIS 261

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  ++++L  + ER G    +KG+IT +  + +  D+   PI D    
Sbjct: 262 AAREEVPGRRGYPGYMYTDLATIYERAGRIIGKKGSITQIPILTMPDDDMTHPIPDLTGY 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           I +G IVL+R L   G YPP++PL S+SRL
Sbjct: 322 ITEGQIVLSRPLHRRGIYPPINPLLSLSRL 351


>gi|256819749|ref|YP_003141028.1| F0F1 ATP synthase subunit beta [Capnocytophaga ochracea DSM 7271]
 gi|315225151|ref|ZP_07866968.1| ATP synthase F1 sector beta subunit [Capnocytophaga ochracea F0287]
 gi|256581332|gb|ACU92467.1| ATP synthase F1, beta subunit [Capnocytophaga ochracea DSM 7271]
 gi|314944834|gb|EFS96866.1| ATP synthase F1 sector beta subunit [Capnocytophaga ochracea F0287]
          Length = 504

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 158/330 (47%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  +DG  +L K GD  + I  + P         +   TGI+VID+  P   G
Sbjct: 89  GRLFNVIGDGVDGLGNLPKDGDNGLPIHREAPKFEELSTTTEVLFTGIKVIDLIEPYAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G
Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 208

Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           +                        K+  V    +E P  R    L+ +TIAEYF     
Sbjct: 209 EGFMESMEKGGWDLSKVDRKALKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 268

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G
Sbjct: 269 EGHGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKHG 326

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 386

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +  +    +  L+ R+++ +DI  I G
Sbjct: 387 LGKEHYECAQRVKELLQRYKQLQDIIAILG 416


>gi|4063532|gb|AAC98324.1| ATP synthase beta subunit [Brownlowia elata]
          Length = 456

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +     
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINTIAKAHGCVSVFGGVGERTREGNDLYXEMXESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDN-VLLILDSITRFAH 264
                NL +S V  V    +E P  R    L+A+T+AEYF    +  V L +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNEQXVXLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|57868930|gb|AAW57461.1| ATP synthase beta subunit [Impatiens auricoma]
          Length = 493

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 215

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E   G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 216 GVINEQNFGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 273

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 274 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLT 331

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 332 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 391

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 392 QRYKELQDIIAILG 405


>gi|189095386|ref|YP_001936399.1| ATP synthase CF1 beta subunit [Heterosigma akashiwo]
 gi|157694729|gb|ABV66005.1| ATP synthase CF1 beta chain [Heterosigma akashiwo]
 gi|157777960|gb|ABV70146.1| ATP synthase CF1 beta chain [Heterosigma akashiwo]
          Length = 474

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 17/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG P+D    +     ++ I    P     +     F+TGI+V+D+  P   G 
Sbjct: 91  GRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGG 150

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL------GD 212
           +IG+F G+G+GK+     L++  A++     V   +  ER RE  +  E+          
Sbjct: 151 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINKQ 209

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AE+F      +VLL +D+I RF  +  E+
Sbjct: 210 NLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEV 269

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +  
Sbjct: 270 SALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPATTF 327

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +  K+   +       ++   + R++E +D
Sbjct: 328 AHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKTLQRYKELQD 387

Query: 389 IRLIGG 394
           I  I G
Sbjct: 388 IIAILG 393


>gi|6724287|gb|AAB51733.2| ATP synthase beta chain [Ophioglossum reticulatum]
          Length = 458

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 165/330 (50%), Gaps = 21/330 (6%)

Query: 81  ISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNR 138
           ++ G  VF  G   + P      GR+ N LG+P+D    LG  D      + K  PA  +
Sbjct: 49  LTRGMQVFDTGAPLVVPVGESTLGRIFNVLGEPVD---ELGPVDADETSPIHKPAPAFTQ 105

Query: 139 QRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
              +   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 106 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 165

Query: 198 RGREVREFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS 246
            G   RE  + Y+           N+ +S V  V    +ESP  R    LTA+T+AEYF 
Sbjct: 166 VGERTREGNDLYMEMKESKVINEQNVSESKVALVYGQMNESPGARMRVGLTALTMAEYFR 225

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 226 DVNKQDVLLSIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 283

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 284 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLI 343

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +E  K    +   + R++E +DI  I G
Sbjct: 344 VGEEHYKTAQGVKQTLQRYKELQDIIAILG 373


>gi|164566055|gb|ABY61170.1| ATP synthase beta subunit [Danaea antillensis]
          Length = 394

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRHVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|111283718|gb|ABH09209.1| ATPase beta subunit [Temnoma pulchellum]
          Length = 449

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPIDTSTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|164566047|gb|ABY61166.1| ATP synthase beta subunit [Christensenia aesculifolia]
          Length = 394

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQSDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|119368022|dbj|BAF40514.1| ATP synthase beta subunit [Picrodendron baccatum]
          Length = 489

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +      + F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLEIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNYGGVSVFGGVGERTREGNDLYKEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  S LD   VL+R LA +G YP VDPL S S  L     S+   +    +   + R+
Sbjct: 331 PATTFSHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVSSKHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118573538|sp|Q2PQH4|ATPB_FUCVE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|83596390|gb|ABC25543.1| ATP synthase CF1 beta subunit [Fucus vesiculosus]
 gi|269991277|emb|CAX12455.1| ATP synthase CF1 beta chain [Fucus vesiculosus]
          Length = 476

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG    + ++ I    P   + +     F+TGI+V+D+  P
Sbjct: 89  TTLGRIFNVLGQPID---NLGDTPSNETLPIHRSAPAFTDLETRPAIFETGIKVVDLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 146 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 205

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 206 INEKNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP  
Sbjct: 266 GSEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTNQGSITSIQAVYVPADDLTDPAP 323

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       DE  K    +   + R++
Sbjct: 324 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYK 383

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 384 ELQDIIAILG 393


>gi|157488196|gb|ABV57775.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007a]
 gi|157488199|gb|ABV57777.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007a]
 gi|157488202|gb|ABV57779.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b]
 gi|157488205|gb|ABV57781.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b]
 gi|157488208|gb|ABV57783.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b]
 gi|157488211|gb|ABV57785.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007c]
 gi|157488214|gb|ABV57787.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007d]
          Length = 498

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +   ++   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIITILG 409


>gi|61196970|gb|AAX39470.1| ATP synthase beta subunit [Tolypella nidifica]
 gi|61196972|gb|AAX39471.1| ATP synthase beta subunit [Tolypella porteri]
          Length = 402

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTVTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|20467379|gb|AAL27820.1| ATPase beta subunit [Ephedra californica]
          Length = 449

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 78  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLXINLAIFETGIKVVDLLAPYR 134

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 135 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 193

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 194 NEKNIIESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 253

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 254 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 311

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E
Sbjct: 312 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKE 371

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 372 LQDIIAILG 380


>gi|290490162|gb|ADD31488.1| ATP synthase CF1 beta subunit protein [Rhododendron simsii]
          Length = 498

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPLDTRTTSPIHRSAPAFIELETKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKET 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  K+   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|291615436|ref|YP_003525593.1| ATP synthase F1, subunit beta [Sideroxydans lithotrophicus ES-1]
 gi|291585548|gb|ADE13206.1| ATP synthase F1, beta subunit [Sideroxydans lithotrophicus ES-1]
          Length = 473

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 153/308 (49%), Gaps = 23/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+PID    + K D    I    P            +TGI+VID+  P   G 
Sbjct: 91  GRIMDVLGRPIDEVGPI-KSDEKRSIHQAAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 149

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-----------E 207
           ++G+F G+G+GK+     L++  A+      V    VGER RE  +F            E
Sbjct: 150 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMSDAGVIDKE 208

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
           D+      K  +V    +E P  R    L+ +T+AE F  +G ++L  +D+I R+  +  
Sbjct: 209 DF---TKSKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGT 265

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 266 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 323

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
               LD  +VL+R +A  G YP VDPL S SR  D     +E   V+ S+   + R++E 
Sbjct: 324 TFLHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYSVARSVQQTLQRYKEL 383

Query: 387 RDIRLIGG 394
           RDI  I G
Sbjct: 384 RDIIAILG 391


>gi|61968317|gb|AAX57085.1| ATP synthase beta subunit [Securinega durissima]
          Length = 479

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 157/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGDPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----------VR 203
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE           R
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESR 208

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
              E+ +G++  K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF
Sbjct: 209 VINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRF 266

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  D
Sbjct: 267 VQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTD 324

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + 
Sbjct: 325 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQ 384

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 385 RYKEVQDIIAILG 397


>gi|182626103|ref|ZP_02953864.1| V-type ATPase, B subunit [Clostridium perfringens D str. JGS1721]
 gi|177908624|gb|EDT71145.1| V-type ATPase, B subunit [Clostridium perfringens D str. JGS1721]
          Length = 460

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 17/318 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ +N D  +V +     G  +    + F      I  S    GRV + +G+P D   
Sbjct: 42  GKVLEVNGDKAMVQLFEGSAGINLKNTKVRFLGRPLEIGVSEDMLGRVFDGMGRPKDNGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           ++    + D++ E ++ V     R    +  +TGI  ID    L  GQ++ VF+GSG+  
Sbjct: 102 NIIPEKRLDINGEAINPVA----RNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             L +  AR      SD    VI + +G    E   F++++     + +SV+ +  + + 
Sbjct: 158 KELAAQIARQAKVLNSDSKFAVIFAAIGITFEEAEFFVDEFTKTGAIDRSVLFMNLASDP 217

Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+P  RGYP  +
Sbjct: 218 AIERIATPRMALTTAEYLAYEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  L ER G    ++G+IT +  + +  D+   PI D    I +G I+L+R L ++G
Sbjct: 278 YTDLSTLYERAGRLVGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337

Query: 347 RYPPVDPLASVSRLADKA 364
             PP+D L S+SRL DK 
Sbjct: 338 IMPPIDVLPSLSRLKDKG 355


>gi|154489796|ref|ZP_02030057.1| hypothetical protein PARMER_00024 [Parabacteroides merdae ATCC
           43184]
 gi|154089521|gb|EDN88565.1| hypothetical protein PARMER_00024 [Parabacteroides merdae ATCC
           43184]
          Length = 505

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 165/326 (50%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G PIDG   L K   ++ I  + P   +     +   TGI+VID+  P   G 
Sbjct: 94  GRLMNVTGNPIDGMTELDKKG-ALPIHREPPKFEDLTTSREVLYTGIKVIDLLEPYSKGG 152

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +++ F   + + VGER RE    +RE I+  +   
Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---S 246
           G+  KKS+                     +V    +E P  R    L+ +TIAE F   +
Sbjct: 211 GEEFKKSMEAGHWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDLA 270

Query: 247 SKGD--NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           ++G+  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +K
Sbjct: 271 AEGETKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
               E  +    +  ++ R +E +DI
Sbjct: 389 IVGKEHYETAQRVKQILQRNKELQDI 414


>gi|89574043|gb|ABD77247.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Diceros bicornis]
          Length = 327

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 6   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 65  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E  ++ 
Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVA 242

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263


>gi|56675681|emb|CAB63705.2| atp synthase beta subunit [Stanleya pinnata]
          Length = 499

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LG+ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGEEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|7708491|emb|CAB89939.1| ATP synthase beta subunit [Megacarpaea polyandra]
          Length = 482

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 40  KGRDILGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|34582340|sp|Q9MRR9|ATPB_BRASC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687964|emb|CAB89702.1| ATP synthase beta subunit [Brasenia schreberi]
 gi|14717968|gb|AAK72726.1| ATP synthase beta subunit [Brasenia schreberi]
          Length = 498

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
            C  GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GCTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|89574041|gb|ABD77246.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Ceratotherium simum]
          Length = 327

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 6   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 65  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E  ++ 
Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVA 242

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263


>gi|5758907|gb|AAD50881.1| ATP synthase beta subunit [Ravenala madagascariensis]
          Length = 496

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTSQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|183206608|gb|ACC54502.1| ATP synthase beta subunit [Wahlenbergia gloriosa]
          Length = 488

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER  E  +  ++    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTPEGNDLYKEMKDS 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIITILG 399


>gi|147843974|emb|CAN81591.1| hypothetical protein VITISV_004549 [Vitis vinifera]
          Length = 487

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 152/300 (50%), Gaps = 9/300 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   G 
Sbjct: 221 XALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGR 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 281 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 338

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI  I G
Sbjct: 339 TVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILG 398


>gi|20269438|gb|AAM17946.1| ATP synthase beta subunit [Shortia exappendiculata]
          Length = 490

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRXAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGTDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|213646872|ref|ZP_03376925.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 363

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 135/255 (52%), Gaps = 7/255 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 30  LETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 89

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 90  GNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 149

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 150 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 207

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      E       +  +
Sbjct: 208 TDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSI 267

Query: 380 IHRFEETRDIRLIGG 394
           + R++E +DI  I G
Sbjct: 268 LQRYQELKDIIAILG 282


>gi|184127877|gb|ACC67838.1| ATP synthase beta chain [Equisetum ramosissimum subsp. debile]
          Length = 389

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + + +  I    P  M+ +     F+TGI+V+D+  P  
Sbjct: 1   LGRIFNVLGEPVD---NMGPVEATAKSPIHKPAPAFMDLETTVSIFETGIKVVDLLAPYR 57

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 58  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 117

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 118 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 177

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 178 EVSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 235

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R++E
Sbjct: 236 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL-QPWIVGEEHYEVAQGVKQTLQRYKE 294

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 295 LQDIIAILG 303


>gi|113910810|gb|ABI48137.1| ATPase beta subunit [Porella pinnata]
          Length = 473

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S  + + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 84  ATLGRIFNVLGEPVD---NLGPVDASTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 141 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 200

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 201 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 319 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|183206638|gb|ACC54517.1| ATP synthase beta subunit [Wahlenbergia berteroi]
          Length = 462

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+ ID    +  G  S  I    P  ++       F+TGI+V+D+  P 
Sbjct: 86  GATLGRIFNVLGETIDNLGPVDTGTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +
Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGV 203

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 204 INEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA  G YP VDPL S S +      +DE  +   S+   + R++
Sbjct: 322 ATTFAHLDATTVLSRGLAXXGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYK 381

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 382 ELQDIITILG 391


>gi|33318667|gb|AAQ05217.1| ATP synthase beta subunit [Metasequoia glyptostroboides]
          Length = 478

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TG
Sbjct: 81  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETG 137

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 138 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 196

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 197 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 257 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +   
Sbjct: 315 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 374

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 375 GVKQTLQRYKELQDIIAILG 394


>gi|71277390|gb|AAZ29875.1| ATP synthase beta subunit [Lychnothamnus barbatus]
          Length = 354

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 23  LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 79

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 80  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 139

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 140 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 199

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 200 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 257

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 258 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 316

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 317 LQDIIAILG 325


>gi|21684927|emb|CAD11590.1| ATP synthase beta subunit [Streptochaeta spicata]
          Length = 451

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 215 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKETLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|19033055|gb|AAL83512.1|AF408784_1 ATP synthase beta subunit [Lychnothamnus barbatus]
 gi|61196964|gb|AAX39467.1| ATP synthase beta subunit [Lychnothamnus barbatus]
          Length = 402

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|108796774|ref|YP_636388.1| CF1 beta subunit of ATP synthase [Staurastrum punctulatum]
 gi|118573758|sp|Q32RY8|ATPB_STAPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|61393542|gb|AAX45683.1| CF1 beta subunit of ATP synthase [Staurastrum punctulatum]
          Length = 493

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  + ++  ++ +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPVD---ELGPVNATITSVIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   A+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKKTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|11466794|ref|NP_039390.1| ATP synthase CF1 beta subunit [Oryza sativa Japonica Group]
 gi|11991|emb|CAA34003.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|344014|dbj|BAA00334.1| ATP synthetase beta subunit [Oryza sativa Japonica Group]
 gi|226612|prf||1603356AJ ATPase beta
          Length = 498

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|212538521|ref|XP_002149416.1| ATP synthase F1, beta subunit, putative [Penicillium marneffei ATCC
           18224]
 gi|210069158|gb|EEA23249.1| ATP synthase F1, beta subunit, putative [Penicillium marneffei ATCC
           18224]
          Length = 519

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + K      I ++ P    +    +   TGI+V+D+  P   G
Sbjct: 130 LGRIMNVTGDPIDERGPI-KATKFAPIHAEPPSFAEQSTSAEVLVTGIKVVDLLAPYARG 188

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +     +   
Sbjct: 189 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 247

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 248 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 307

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 308 ALLGRIPSAVGYQPTLAVDMGIMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 365

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 366 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGEDHYHTATRVQQMLQEYKSLQDI 425

Query: 390 RLIGG 394
             I G
Sbjct: 426 IAILG 430


>gi|18976555|ref|NP_577912.1| V-type ATP synthase subunit B [Pyrococcus furiosus DSM 3638]
 gi|25091537|sp|Q8U4A5|VATB_PYRFU RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|18892112|gb|AAL80307.1| ATPase subunit B [Pyrococcus furiosus DSM 3638]
          Length = 462

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 19/315 (6%)

Query: 60  GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+  R NL IV +       +I    + F     ++  S    GR+ N +GKPIDG  
Sbjct: 42  GQVLDARENLAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +    + D+    ++ V  A  R  ++    TGI  ID    L  GQ++ +F+GSG+  
Sbjct: 102 EIIPEDRRDVHGAPLNPVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPH 157

Query: 175 STLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           + L +  AR        + F  V+ + +G    E   F + +     ++++V+ +  +D+
Sbjct: 158 NKLAAQIARQAKVLGEEESF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADD 216

Query: 227 SPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
             I R + P  A+T+AEY +   D +VL+IL  +T +  ++REI+    E+P  RGYP  
Sbjct: 217 PAIERIITPRMALTVAEYLAFDYDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGY 276

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           ++++L  + ER G    +KG+IT +  + +  D+   PI D    I +G IVL+R L   
Sbjct: 277 MYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRDLHRR 336

Query: 346 GRYPPVDPLASVSRL 360
           G YPP+D L S+SRL
Sbjct: 337 GIYPPIDVLPSLSRL 351


>gi|303240207|ref|ZP_07326727.1| H(+)-transporting two-sector ATPase [Acetivibrio cellulolyticus
           CD2]
 gi|302592298|gb|EFL62026.1| H(+)-transporting two-sector ATPase [Acetivibrio cellulolyticus
           CD2]
          Length = 461

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 16/308 (5%)

Query: 101 WCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
             GRV + LG+P+DG  + +    L M  +   P A N     +  +TG+  ID    L 
Sbjct: 85  MLGRVFSGLGRPVDGGPNVIPDTRLDMNGIPMNPAARNYP--SEFIQTGVSAIDGLNTLV 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN 213
            GQ++ +F+GSG+  + L +  AR      +D    V+ + +G    E   FI D+    
Sbjct: 143 RGQKLPIFSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAIGITFEEADFFISDFKRTG 202

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
            + ++V+ +  +++  I R   P  A+T AEY + + D +VL+IL  IT +A ++RE++ 
Sbjct: 203 AIDRTVLFINLANDPAIERIATPRMALTAAEYLAFEKDMHVLVILTDITNYAEALREVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              E+P  RGYP  ++++L  L ER G    + G+IT +  + +  D+   PI D    I
Sbjct: 263 ARKEVPGRRGYPGYLYTDLATLYERAGRKVSKDGSITLIPILTMPEDDKTHPIPDLTGYI 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEET 386
            +G I+L R L  +   PP+D L S+SRL DK         D    ++ L     R +E 
Sbjct: 323 TEGQIILGRELHRKAITPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFAAYARGKEA 382

Query: 387 RDIRLIGG 394
           +++ +I G
Sbjct: 383 KELAVILG 390


>gi|257853486|gb|ACV71745.1| ATP synthase beta subunit [Ochthocosmus longipedicellatus]
          Length = 482

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PID    +  G  S  I    P  +        F+TGI+V+D+  P  
Sbjct: 90  ATLGRIFNVLGEPIDDLGPVDTGTTS-PIHRAAPAFIQLDTKFSIFETGIKVVDLLAPYR 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 208

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
            DN+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 209 EDNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 268

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 269 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 326

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 327 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKEL 386

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 387 QDIIAILG 394


>gi|20467421|gb|AAL27841.1| ATPase beta subunit [Sequoiadendron giganteum]
          Length = 398

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TG
Sbjct: 16  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETG 72

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 73  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 131

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 132 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 191

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 192 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 249

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +   
Sbjct: 250 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 309

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 310 GVKQTLQRYKELQDIIAILG 329


>gi|44885334|dbj|BAD11910.1| ATP synthase beta subunit [Nitella pulchella]
 gi|44885336|dbj|BAD11911.1| ATP synthase beta subunit [Nitella pulchella]
          Length = 340

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|28202179|ref|NP_777420.1| ATP synthase CF1 beta subunit [Anthoceros formosae]
 gi|3915617|sp|Q31794|ATPB_ANTFO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|2760294|dbj|BAA24160.1| ATPase beta subunit [Anthoceros formosae]
 gi|27807881|dbj|BAC55356.1| ATPase beta subunit [Anthoceros formosae]
 gi|27808010|dbj|BAC55452.1| ATPase beta subunit [Anthoceros formosae]
          Length = 492

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPVD---NLGAIDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESKV 219

Query: 220 -------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                        V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 220 INEQDISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|170293989|gb|ACB13088.1| ATP synthase beta subunit [Pseudococcomyxa simplex]
          Length = 367

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   SLG  D    + I    P  ++       F+TGI+V+D+  P  
Sbjct: 21  LGRIFNVLGEPVD---SLGPVDSKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYR 77

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 78  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESKVI 136

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             DNL  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 137 DEDNLSASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 196

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 197 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 254

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R++
Sbjct: 255 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKETLQRYK 313

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 314 ELQDIIAILG 323


>gi|156530119|gb|ABU75156.1| AtpB [Castela erecta]
          Length = 488

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D +GQ+I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 48  KSRDTVGQLINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I  + P  +        F+TGI+V+D+  P   G 
Sbjct: 108 IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 224

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 225 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 284

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 402

Query: 390 RLIGG 394
             I G
Sbjct: 403 IAILG 407


>gi|149918543|ref|ZP_01907032.1| F0F1 ATP synthase subunit beta [Plesiocystis pacifica SIR-1]
 gi|149820619|gb|EDM80031.1| F0F1 ATP synthase subunit beta [Plesiocystis pacifica SIR-1]
          Length = 540

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 158/317 (49%), Gaps = 37/317 (11%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K +    I  K P   ++    + F TGI+VID+  P   G
Sbjct: 137 LGRIMNVVGEPVDEQGEI-KTEEFRPIHRKAPEFTDQSVKVEPFVTGIKVIDLLAPYRRG 195

Query: 162 QRIGVFAGSGIGKSTLL--------------SMFAR--------SDCFDKVIISLV---- 195
            +IG+F G+G+GK+ LL              S+FA         +D + ++I S V    
Sbjct: 196 GKIGLFGGAGVGKTVLLMELINNVGKTHGGYSVFAGVGERTREGNDLYFEMIESDVIDAD 255

Query: 196 -GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253
             E  REV E   D       K  +V    +E P  R    L+A+T AEYF    G +V+
Sbjct: 256 WNEDTREVHEIKSDS-----SKVALVYGQMNEPPGARARVALSALTQAEYFRDDMGQDVM 310

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V ++
Sbjct: 311 LFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGALQERI--TTTTKGSITSVQAI 368

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKL 372
            V  D+  DP   +  + LD   VLNR+L E G YP VDPL S S  L  +        +
Sbjct: 369 YVPADDLTDPAPATTFAHLDATTVLNRALTEIGIYPAVDPLDSSSTILTPEVVGERHYGV 428

Query: 373 VSSLTHLIHRFEETRDI 389
             ++  ++ +++E +DI
Sbjct: 429 ARAVQQILQKYKELQDI 445


>gi|6815115|dbj|BAA90397.1| ATP synthase beta subunit [Oryza sativa (japonica cultivar-group)]
          Length = 498

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|77553343|gb|ABA96139.1| ATP synthase beta chain, putative [Oryza sativa Japonica Group]
          Length = 410

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHISAPAFIELDTKLSIFQTGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 207 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E+++  G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSSLLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVHADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|148260678|ref|YP_001234805.1| F0F1 ATP synthase subunit beta [Acidiphilium cryptum JF-5]
 gi|190358247|sp|A5FZ54|ATPB_ACICJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146402359|gb|ABQ30886.1| ATP synthase F1 subcomplex beta subunit [Acidiphilium cryptum JF-5]
          Length = 476

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 18/307 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    +     +  I  + P    +    +   TGI+V+D+  P   G 
Sbjct: 88  GRILNVIGEPIDERGPI-PTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAPYLKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +        LG+
Sbjct: 147 KIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGE 206

Query: 213 NL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R    L+ +T+AEYF   +G +VL  +D+I RF  +  E
Sbjct: 207 GTTEGSKVALVYGQMNEPPGARMRVGLSGLTMAEYFRDEEGQDVLFFVDNIFRFTQAGAE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   + 
Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATS 324

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387
            S LD    LNR++AE+G YP VDPL S SR  D     +E   V+  +  ++  ++  +
Sbjct: 325 FSHLDATTTLNRAIAEKGIYPAVDPLDSTSRALDPRIVGEEHYNVAREVQRILQSYKSLQ 384

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 385 DIIAILG 391


>gi|222139893|ref|YP_002519961.1| ATP synthase CF1 beta chain [Ephedra equisetina]
 gi|220983562|dbj|BAH11329.1| ATP synthase CF1 beta chain [Ephedra equisetina]
          Length = 489

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 111 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 167

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         +   VGER RE  +   +     +  
Sbjct: 168 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 227

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 228 EKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 287

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 288 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 345

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 346 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 405

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 406 QDIIAILG 413


>gi|6688704|emb|CAB65233.1| ATP synthase beta subunit [Myoporum mauritianum]
          Length = 498

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D+S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDISTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|58081512|gb|AAW65231.1| AtpB [Pellia appalachiana]
          Length = 382

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 157/315 (49%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    + +  I    P           F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVNANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S  G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSAFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEY       +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 296 LQDIIAI----PGLD 306


>gi|50233978|ref|YP_052756.1| ATP synthase CF1 beta subunit [Oryza nivara]
 gi|68565033|sp|Q6ENG7|ATPB_ORYNI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148886912|sp|P0C2Z8|ATPB_ORYSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148886914|sp|P12085|ATPB_ORYSJ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148897909|sp|P0C2Z7|ATPB_ORYSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|49615002|dbj|BAD26785.1| ATPase beta subunit [Oryza nivara]
          Length = 498

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|16416730|gb|AAL18389.1|AF313541_1 ATP synthase beta chain [Equisetum x ferrissii]
          Length = 395

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + + +  I    P  M+ +     F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVEATAKSPIHKPAPAFMDLETTVSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL-QPWIVGEEHYEVAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|212896664|gb|ACJ38535.1| membrane-bound ATP synthase subunit B [Tephrosia rhodesica]
          Length = 470

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +   S+   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQSVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|153815572|ref|ZP_01968240.1| hypothetical protein RUMTOR_01808 [Ruminococcus torques ATCC 27756]
 gi|317502175|ref|ZP_07960349.1| V-type sodium ATPase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088740|ref|ZP_08337650.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847214|gb|EDK24132.1| hypothetical protein RUMTOR_01808 [Ruminococcus torques ATCC 27756]
 gi|316896384|gb|EFV18481.1| V-type sodium ATPase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407263|gb|EGG86766.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 456

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 158/311 (50%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG+PID G + L    + +  +   P A  R   E+  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGLGRPIDDGPEILPDARMDINGLPMNPAA--RCYPEEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F+E + 
Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVLGTDENFAVVFAAMGITFEESNFFVESFR 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               L ++V+ +  +++  I R   P  A+T AEY +  K  +VL+IL  IT +A ++RE
Sbjct: 200 ETGALDRTVLFINLANDPAIERIATPKMALTAAEYLAFEKEMHVLVILTDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  + ER G    + G+IT +  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLASIYERAGRQNGKNGSITMIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383
             I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L     R 
Sbjct: 320 GYITEGQIILSRDLYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFSAYARG 379

Query: 384 EETRDIRLIGG 394
           ++ +++ +I G
Sbjct: 380 KDAKELMVILG 390


>gi|119350467|gb|ABL63184.1| AtpB [Chaetophora incrassata]
          Length = 390

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + +  + I    P   +       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGEPVD---NLGPVETEQKLPIHRSAPAFTDLDTRLAIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI----------E 207
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +            E
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVINE 155

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I  F  + 
Sbjct: 156 SNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFPFVQAG 213

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 214 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 271

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       DE       +   + R++E
Sbjct: 272 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYACAQQVKQTLQRYKE 331

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 332 LQDIIAILG 340


>gi|6467943|gb|AAF13242.1|AF197609_1 ATPase beta subunit [Thottea tomentosa]
          Length = 493

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D LGQ IR+  ++        V    +   + +  G  V   G     P      GR
Sbjct: 47  KGQDTLGQQIRVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAALSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 107 IFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 223

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 224 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 283

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 284 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 341

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 342 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 401

Query: 390 RLIGG 394
             I G
Sbjct: 402 IAILG 406


>gi|228016834|gb|ACP51660.1| ATP synthase CF1 beta subunit [Pinus attenuata]
          Length = 492

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 160/317 (50%), Gaps = 24/317 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P           F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  +
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R+
Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRY 396

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 397 KELQDIIAI----PGLD 409


>gi|124006346|ref|ZP_01691180.1| ATP synthase F1, beta subunit [Microscilla marina ATCC 23134]
 gi|123988003|gb|EAY27674.1| ATP synthase F1, beta subunit [Microscilla marina ATCC 23134]
          Length = 505

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 173/357 (48%), Gaps = 47/357 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG ++  K D  + I    P         +   TGI+VID+  P   G 
Sbjct: 90  GRLFNVVGEAIDGIEN-PKTDRRVSIHRAAPTFDQLTTETEVLFTGIKVIDLLEPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+       +  +  V + + VGER RE    +RE IE  +   G+
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNIAKAYAGVSVFAGVGERTREGNDLLREMIESGIVNYGE 208

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246
             +K++                      V    +E P  R    L+ ++IAEYF     +
Sbjct: 209 EFEKALHEGGWPLDKIDREKLKESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGDGT 268

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG+++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G+
Sbjct: 269 GKGNDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGVMQERI--TSTKRGS 326

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R LA  G YP VDPL S SR+      
Sbjct: 327 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRKLASLGIYPAVDPLDSTSRILTADIL 386

Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
            +E   +   +   + R+ E +DI  I     G+D + D   K V++   I  FL Q
Sbjct: 387 GEEHYNIAQRVKETLQRYNELQDIIAI----LGLDELSDDDRKVVNKARRIQRFLSQ 439


>gi|113910868|gb|ABI48166.1| ATPase beta subunit [Physcomitrella patens]
          Length = 417

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 35  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 151

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 152 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 211

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|89574033|gb|ABD77242.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Tupaia glis]
          Length = 320

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 8   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 66

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 67  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 126

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 127 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 184

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 185 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 244

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 245 RGVQKILQDYKSLQDIIAILG 265


>gi|44885330|dbj|BAD11908.1| ATP synthase beta subunit [Nitella mirabilis]
          Length = 340

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|21633431|gb|AAM52190.1| ATP synthase beta subunit [Erycibe hellwigii]
          Length = 490

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LGKP+D    +  G  S  I  + P  +        F+TGI+V+D+  P 
Sbjct: 102 GSTLGRIFNVLGKPVDNLGPVDTGTTS-PIHRRAPAFIQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NEENIAESKVALVYGPMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|5001591|gb|AAD37042.1|AF092116_1 ATP synthase beta subunit [Circaeaster agrestis]
          Length = 486

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  ++       F+TGI+V+D+  P 
Sbjct: 92  GATLGRIXNVLGEPVDNLGPVXTXTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPY 150

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 151 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 210

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  + 
Sbjct: 211 NEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAG 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 271 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    +  K   ++   + R++E
Sbjct: 329 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYKTAQNVKQTLQRYKE 388

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 389 LQDIIAILG 397


>gi|257852986|gb|ACV71504.1| ATP synthase beta subunit [Hua gabonii]
          Length = 491

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 22/306 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 220

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +  +    DE  K    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKTAQRVKQTLQRY 398

Query: 384 EETRDI 389
           +E +DI
Sbjct: 399 KELQDI 404


>gi|119350491|gb|ABL63196.1| AtpB [Fusochloris perforata]
          Length = 393

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 161/308 (52%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +G  +  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+ L+    +  AR+     V   +  ER RE  +   +         +
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIARAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINEE 156

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268
           N+ +S V  V    +E P  R    LTA+T+AEYF   SK D VLL +D+I RF  +  E
Sbjct: 157 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDFSKQD-VLLFIDNIFRFVQAGSE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R++E 
Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKQTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|288806596|gb|ADC54203.1| RE21838p [Drosophila melanogaster]
 gi|288856373|gb|ADC55502.1| SD19625p [Drosophila melanogaster]
          Length = 353

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 10  TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 68

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 69  NDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 128

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 129 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIY 186

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 187 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVA 246

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 247 RGVQKILQDYKSLQDIIAILG 267


>gi|241206625|ref|YP_002977721.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860515|gb|ACS58182.1| ATP synthase F1, beta subunit [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 478

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 159/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I  + P  + +    +   TGI+V+D+  P   G
Sbjct: 93  LGRIMNVIGEPVDEAGPLVTAH-KRSIHQEAPSYVEQSTESQILVTGIKVVDLLAPYARG 151

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  N+ K 
Sbjct: 152 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKH 210

Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                  + +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 211 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 270

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   +  
Sbjct: 271 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E   V+  +   + R++  +D
Sbjct: 329 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYDVARKVQSTLQRYKALQD 388

Query: 389 IRLIGG 394
           I  I G
Sbjct: 389 IIAILG 394


>gi|118917410|dbj|BAF40516.1| ATP synthase beta subunit [Drypetes littoralis]
          Length = 489

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
              G+N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINGENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|89574021|gb|ABD77236.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Cavia porcellus]
          Length = 330

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 9   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 67

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 68  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 127

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 128 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 185

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 186 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 245

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 246 RGVQKILQDYKSLQDIIAILG 266


>gi|61968333|gb|AAX57093.1| ATP synthase beta subunit [Putranjiva zeylanica]
          Length = 478

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
              G+N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 209 VINGENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|219853231|ref|YP_002467663.1| V-type ATP synthase subunit B [Methanosphaerula palustris E1-9c]
 gi|254764989|sp|B8GFQ7|VATB_METPE RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|219547490|gb|ACL17940.1| ATP synthase, B subunit [Methanosphaerula palustris E1-9c]
          Length = 464

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 177/348 (50%), Gaps = 24/348 (6%)

Query: 60  GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+  + D+V +       GIG++     + F     ++       GR+++  GKPIDG
Sbjct: 41  GQVLDTSDDLVVVQVFETTTGIGKD---SGVRFTGETIKMPVGRDMLGRILSGSGKPIDG 97

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +  ++I         R       +TGI  ID    L  GQ++ +F+G+G+  +
Sbjct: 98  GPEIVP-EKRLDITGAAINPYARASPSDFIETGISTIDGTNTLVRGQKLPIFSGAGLPHN 156

Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
            +    AR       ++ F  V+ + +G    E   F++D+     L+++VV +  +D+ 
Sbjct: 157 NVALQIARQAKVPGSTEEF-AVVFAAMGITQEEANYFMQDFERTGALERAVVFLNLADDP 215

Query: 228 PILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            + R + P  A+T AEY + + G +VL+IL  +T +  ++R+I     E+P  RGYP  +
Sbjct: 216 AVERIITPRLALTTAEYLAFELGMHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYM 275

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  L ER G  + +KG++T +  + + GD+   PIAD    I +G IV++R L  +G
Sbjct: 276 YTDLASLYERAGIIKGQKGSVTQIPILTMPGDDITHPIADLTGYITEGQIVISRELHRKG 335

Query: 347 RYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
            YPP++ L S+SRL +    K  + ++ K VS    +   + E  D+R
Sbjct: 336 IYPPINVLPSLSRLMNLGIGKGHTREDHKKVSD--QMYAAYAEGNDLR 381


>gi|164566111|gb|ABY61198.1| ATP synthase beta subunit [Danaea nodosa]
          Length = 394

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VD L S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDGLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|119350471|gb|ABL63186.1| AtpB ['Chlorella' luteoviridis]
          Length = 392

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG P+D    +G  +  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGDPVDNLGDVGAKE-GLPIHRPAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESKVINEE 156

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268
                K  +V    +E P  R    LTA+T+AEYF   SK D VLL +D+I RF  +  E
Sbjct: 157 DLSSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDISKRD-VLLFIDNIFRFVQAGSE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEET 386
            S LD   VL+R+LA +G YP VDPL S S +  + W   EK    +  +   + R++E 
Sbjct: 274 FSHLDATTVLSRALASKGIYPAVDPLDSTSTML-QPWIVGEKHYACAQDVKQTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|307343656|emb|CBJ19245.1| atpD synthase beta subunit [Micromonospora purpureochromogenes]
          Length = 298

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            +TGI+VID+  P   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 1   LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +      + K+ +V    DE P  R    L+A+T+AEYF   K   VLL + +I
Sbjct: 61  GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIYNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI     +   IT++ ++ V  D+
Sbjct: 121 FRFTQAGSEVSTRLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378
           + DP   +  + LD    L RS++++G YP VDPLAS SR LA +    +  ++ + +  
Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGPEHFQVATEVKR 238

Query: 379 LIHRFEETRDIRLIGG 394
           ++ R+++ +DI  I G
Sbjct: 239 ILQRYKDLQDIIAILG 254


>gi|111283730|gb|ABH09215.1| ATPase beta subunit [Leiomitra lanata]
          Length = 471

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPIDTSTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +        + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGAKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|313891210|ref|ZP_07824829.1| ATP synthase ab C terminal domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120573|gb|EFR43693.1| ATP synthase ab C terminal domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 460

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ ++ D  +V +     G  ++   + F      ++ S    GR+ + +GKP+DG  
Sbjct: 44  GQVLEVHHDKAVVQLFEGSSGINLAKSKVRFTGHPLELAVSEDMVGRIFDGMGKPLDGGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  ++I  +    ++R   ++  +TGI  ID    L  GQ++ VF+GSG+  + L
Sbjct: 104 EL-IAEKFLDIDGQAINPISRDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNEL 162

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E   F+ED      + +SV+ +  +++  I 
Sbjct: 163 AAQIARQATVLGDDGKFAVVFAAIGITFEEAEFFMEDLRKTGAISRSVLFINLANDPAIE 222

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  K  +VL+I+  +T +  ++REI+    E+P  RGYP  +++ 
Sbjct: 223 RIATPRIALTTAEYLAYEKNMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 282

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G    + G++T +  + +  D+   PI D    I +G I+L+ +L   G  P
Sbjct: 283 LSTLYERAGRLVGKAGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHALYNSGLEP 342

Query: 350 PVDPLASVSRLADKA 364
           P+D L S+SRL DK 
Sbjct: 343 PIDILPSLSRLKDKG 357


>gi|237688677|ref|YP_002905293.1| ATP synthase CF1 beta subunit [Pinus krempfii]
 gi|226951134|gb|ACO94197.1| ATP synthase CF1 beta subunit [Pinus krempfii]
          Length = 492

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 163/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|12585410|sp|O32467|VATB_THESI RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|2605628|dbj|BAA23343.1| ATPase beta subunit [Thermococcus sp.]
          Length = 463

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%)

Query: 27  SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81
           S+++ +Y  +  +   + V  G+ V +         GQV+  R ++ IV +       +I
Sbjct: 7   STVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVFEGTRDLDI 66

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138
               + F     ++  S    GR+ N +GKPIDG   +    + D+    ++ V  A  R
Sbjct: 67  KTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 126

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191
             ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+
Sbjct: 127 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVV 181

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY +   D
Sbjct: 182 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 241

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL+IL  +T +A ++REI+    E+P  RGYP  ++++L  + ER G    +KG+IT 
Sbjct: 242 MQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQ 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 302 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 352


>gi|156598640|gb|ABU85576.1| ATP synthase CF1 beta subunit [Scaevola aemula]
          Length = 498

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPID---NLGTVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 220

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  K    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQEVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|111283720|gb|ABH09210.1| ATPase beta subunit [Geocalyx caledonicus]
          Length = 449

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 60  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 116

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 117 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 176

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 177 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 236

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 237 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 294

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 295 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 353

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 354 KELQDIIAILG 364


>gi|183206506|gb|ACC54451.1| ATP synthase beta subunit [Codonopsis viridis]
          Length = 488

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+ EYF      +VLL +D+I RF  
Sbjct: 211 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMGEYFRDVNKQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIITILG 399


>gi|56236588|gb|AAV84661.1| ATP synthase beta subunit [Cunninghamia lanceolata]
          Length = 423

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 161/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D    LG  D L+   + +  PA  +   +   F+TG
Sbjct: 26  GPLSVPVGESTLGRIFNVLGEPVD---DLGPVDALTTSPIHRSAPAFTQLETKFSIFETG 82

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 83  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 141

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 142 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 201

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 202 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 259

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +   
Sbjct: 260 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 319

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 320 GVKQTLQRYKELQDIIAILG 339


>gi|108773322|ref|YP_635877.1| CF1 beta subunit of ATP synthase [Oltmannsiellopsis viridis]
 gi|118573711|sp|Q20EW8|ATPB_OLTVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|82541904|gb|ABB81945.1| CF1 beta subunit of ATP synthase [Oltmannsiellopsis viridis]
          Length = 481

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 162/328 (49%), Gaps = 26/328 (7%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQR 140
           D+V       +       GR+ N LG+P+D       GD+S E    I    P  ++   
Sbjct: 80  DVVDTGAPLTVPVGTSTLGRIFNVLGEPVDN-----LGDVSNEGGLPIHRPAPLFVDLDT 134

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVG 196
               FKTGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  
Sbjct: 135 QLSIFKTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG- 193

Query: 197 ERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +         DNL +S V  V    +E P  R    LTA+T+AEYF   
Sbjct: 194 ERTREGNDLYAEMKESKVINEDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 253

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+I
Sbjct: 254 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSI 311

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWS 366
           T++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S  L  +   
Sbjct: 312 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPQTLG 371

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +      ++   + R++E +DI  I G
Sbjct: 372 EEHYGCAQAVKTTLQRYKELQDIIAILG 399


>gi|21684871|emb|CAD11562.1| ATP synthase beta subunit [Lyginia barbata]
          Length = 491

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 98  GVTLGRIFNVLGKPVD---NLGPVDTSTISPIHRSAPAFIELETKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINERNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|297840991|ref|XP_002888377.1| ATPase beta subunit [Arabidopsis lyrata subsp. lyrata]
 gi|297334218|gb|EFH64636.1| ATPase beta subunit [Arabidopsis lyrata subsp. lyrata]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +++I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFINNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|42559030|gb|AAS20201.1| ATP synthase beta subunit [Strelitzia reginae]
          Length = 478

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 212 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|37543468|gb|AAM08915.1| ATP synthase beta subunit [Cliftonia monophylla]
          Length = 464

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 193

Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +   +N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 194 RVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 253

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 311

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R
Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQR 371

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 372 YKELQDIIAILG 383


>gi|111283722|gb|ABH09211.1| ATPase beta subunit [Paraschistochila tuloides]
          Length = 472

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S       P PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|332105881|gb|AEE01403.1| ATP synthase beta chain [Malva pusilla]
          Length = 486

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 214

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 215 GVINEQKLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 272

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 273 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 330

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 331 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 390

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 391 QRYKELQDIIAILG 404


>gi|113910858|gb|ABI48161.1| ATPase beta subunit [Dicranella heteromalla]
          Length = 470

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 161/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 81  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 196

Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 197 VINEEKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 373

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 374 YKELQDIIAILG 385


>gi|297837989|ref|XP_002886876.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Arabidopsis lyrata subsp. lyrata]
 gi|297332717|gb|EFH63135.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRDVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|71277388|gb|AAZ29874.1| ATP synthase beta subunit [Lychnothamnus barbatus]
          Length = 359

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|19920171|gb|AAM08603.1|AC092750_37 Putative atpB; ATPase beta subunit from chromosome 10 chloroplast
           insertion [Oryza sativa Japonica Group]
 gi|21327363|gb|AAM48268.1|AC122148_21 Putative atpB; ATPase beta subunit from chromosome 10 chloroplast
           insertion [Oryza sativa Japonica Group]
 gi|110288944|gb|ABB47307.2| ATP synthase beta chain, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPTVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|327188928|gb|EGE56120.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium
           etli CNPAF512]
          Length = 493

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I    P  + +    +   TGI+V+D+  P   G
Sbjct: 108 LGRIMNVIGEPVDEAGPLNTAH-KRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARG 166

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     +
Sbjct: 167 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 225

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 226 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   +  
Sbjct: 286 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 344 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|113910824|gb|ABI48144.1| ATPase beta subunit [Blasia pusilla]
          Length = 461

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 161/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D S       P PA  +   +   F+TG
Sbjct: 63  GPLSVPVGEATLGRIFNVLGEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETG 119

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 120 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 179

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
           Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +
Sbjct: 180 YMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 239

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 240 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 297

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   
Sbjct: 298 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 356

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 357 GVKETLQRYKELQDIIAILG 376


>gi|89574045|gb|ABD77248.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Bos taurus]
          Length = 322

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 6   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 65  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 242

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263


>gi|37543315|gb|AAL92722.1| ATP synthase beta subunit [Coleochaete sp. 40D2]
          Length = 391

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D + +  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 32  ATLGRIFNVLGEPVD---ELGPVDTTKLSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 88

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 89  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 148

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 149 INSDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 208

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 209 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 266

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 267 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKKTLQRY 325

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 326 KELQDIIAILG 336


>gi|195183504|dbj|BAG66965.1| ATP synthase beta subunit [Hybanthus elatus]
          Length = 489

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGDEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|73537129|gb|AAZ77708.1| ATP synthase beta subunit [Nitella inversa]
          Length = 348

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA      +   F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTTLTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|71277386|gb|AAZ29873.1| ATP synthase beta subunit [Nitella mirabilis]
          Length = 348

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|119350565|gb|ABL63233.1| AtpB [Uronema belkae]
          Length = 383

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +  + I    P   +       F+ GI+V+D+  P  
Sbjct: 38  LGRIFNVLGEPVD---NLGPVETEQKLPIHRSAPAFTDLDTRLAIFERGIKVVDLLAPYR 94

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210
            G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +       +
Sbjct: 95  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVIV 154

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 155 ESNLSESKVALVYGPMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 214

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       DE   V+  +   + R++E 
Sbjct: 273 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYGVAQKVKQTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|55056880|emb|CAF22240.1| ATP synthase beta subunit [Enkianthus chinensis]
          Length = 475

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  K+   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYKIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|44885338|dbj|BAD11912.1| ATP synthase beta subunit [Nitella furcata]
 gi|44885340|dbj|BAD11913.1| ATP synthase beta subunit [Nitella furcata]
 gi|44885342|dbj|BAD11914.1| ATP synthase beta subunit [Nitella inversa]
 gi|56342283|dbj|BAD74003.1| ATP synthase beta subunit [Nitella furcata]
 gi|56342285|dbj|BAD74004.1| ATP synthase beta subunit [Nitella japonica]
 gi|56342287|dbj|BAD74005.1| ATP synthase beta subunit [Nitella japonica]
 gi|56342289|dbj|BAD74006.1| ATP synthase beta subunit [Nitella japonica]
          Length = 340

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++   + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTLTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|257852966|gb|ACV71494.1| ATP synthase beta subunit [Marathrum cf. oxycarpum Cachoeirc
           9/1996]
          Length = 495

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PID +  L   D +  I    P           F+TGI+V+D+  P  
Sbjct: 105 ATLGRIFNVLGEPID-NLGLVDNDTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 223

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 224 EENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  K   ++  +    +   + R++E 
Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGSEHYETAQKVKQTLQRYKEL 401

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 402 QDIIAILG 409


>gi|89574049|gb|ABD77250.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Hippopotamus amphibius]
          Length = 330

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 9   TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 67

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 68  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 127

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 128 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 185

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 186 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 245

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 246 RGVQKILQDYKSLQDIIAILG 266


>gi|89574017|gb|ABD77234.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Rattus norvegicus]
          Length = 343

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 19  TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 77

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 78  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 137

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 138 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 195

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+
Sbjct: 196 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 255

Query: 375 -SLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 256 RGVQKILQDYKSLQDIIAILG 276


>gi|169786011|ref|XP_001827466.1| ATP synthase F1-sector subunit beta [Aspergillus oryzae RIB40]
 gi|238506943|ref|XP_002384673.1| ATP synthase F1, beta subunit, putative [Aspergillus flavus
           NRRL3357]
 gi|83776214|dbj|BAE66333.1| unnamed protein product [Aspergillus oryzae]
 gi|220689386|gb|EED45737.1| ATP synthase F1, beta subunit, putative [Aspergillus flavus
           NRRL3357]
          Length = 517

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 153/305 (50%), Gaps = 16/305 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G P+D    + K      I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 128 LGRILNVTGDPVDERGPV-KATKYAPIHAEAPEFVEQSTEGEILVTGIKVVDLLAPYARG 186

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +     +   
Sbjct: 187 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 245

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
               K  +V    +E P  R    LT +TIAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 246 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 305

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +  +
Sbjct: 306 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 363

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI
Sbjct: 364 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQDHYDTATRVQQMLQEYKSLQDI 423

Query: 390 RLIGG 394
             I G
Sbjct: 424 IAILG 428


>gi|158340798|ref|YP_001521966.1| F0F1 ATP synthase subunit beta [Acaryochloris marina MBIC11017]
 gi|190358282|sp|A8ZNR6|ATPB_ACAM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158311039|gb|ABW32652.1| ATP synthase F1, beta subunit [Acaryochloris marina MBIC11017]
          Length = 456

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 10/293 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR  N  G PIDG   L KG +   +  +  P   R        TGI+ ID+  PL  G 
Sbjct: 72  GRAFNVFGDPIDGLGPL-KG-MKRSLHGQAVPLHQRTTGTDILVTGIKAIDLLAPLERGS 129

Query: 163 RIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ L++    +    +D V I   +GER RE  E   +      L  +V
Sbjct: 130 KAGLFGGAGVGKTVLITEMIHNIVSRYDGVSIFCGIGERSREGEELYREMKAAGVLNNTV 189

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R      A+T+AEYF  +   +VLL++D++ RF  +  E++   G+LP
Sbjct: 190 MVFGQMNEPPGSRFRVGHAALTMAEYFRDQAHRDVLLMIDNVFRFIQAGSEVSGLMGQLP 249

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL  L ERI       G IT+V +V +  D+  DP A    S L   IV
Sbjct: 250 SRVGYQPTLATELAELEERI--CSTAHGAITSVQAVYIPADDLTDPAAVHTFSHLSASIV 307

Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           L+R    EG YP VDPL S S+ L          ++  ++   +  +E+ +DI
Sbjct: 308 LSRKRTSEGLYPAVDPLQSGSKMLTPSVVGQRHYQVAQAVRKTLAEYEDLKDI 360


>gi|113910832|gb|ABI48148.1| ATPase beta subunit [Riccardia latifrons]
          Length = 472

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    +++  I    P           F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVNANITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +    LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++
Sbjct: 318 ATTFGHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYETAQGVKQTLQRYK 377

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 378 ELQDIIAISG 387


>gi|46360708|gb|AAS89135.1| ATP synthase beta subunit [Podomitrium phyllanthus]
          Length = 382

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|110915622|gb|ABH02599.1| ATP synthase beta subunit [Desmazeria sicula]
          Length = 490

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+K+S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|19033059|gb|AAL83514.1|AF408786_1 ATP synthase beta subunit [Nitella opaca]
          Length = 402

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++      P PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTITFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|257076362|ref|ZP_05570723.1| V-type ATP synthase subunit B [Ferroplasma acidarmanus fer1]
          Length = 458

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 150/292 (51%), Gaps = 9/292 (3%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F    F++  S    GR+ N  G+P+D    +   D  ++I        +R+   +  +T
Sbjct: 73  FTGSTFKLPVSDDMLGRIFNGFGEPVDNGPKIYSKD-KVDITGAAINPYSREEPSEFIET 131

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGERGRE 201
           GI  ID    L  GQ++ +F+G+G+  + L +  A+     K      V+   +G    E
Sbjct: 132 GISTIDGMNTLVMGQKLPIFSGAGLSHNRLATQIAKQAKTLKGGEKFGVVFGAIGITSEE 191

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSI 259
              F++ +     L +SV+ +  + +  + R + P  A+T AEY + + D N+L+IL  +
Sbjct: 192 ANYFMKQFESSGALSESVIFLNLASDPSMDRIILPRVALTTAEYLAYEKDMNMLVILTDM 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           T +  ++REI+++  E+P  RGYP  ++++L  + ER G  +   G+IT +  + + GD+
Sbjct: 252 TNYCEALREISSSREEIPGRRGYPGYMYTDLSTIYERAGKIKGRNGSITQIPILTMPGDD 311

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
             +P+ D    I +G I L+R L+ +  YP VD L S+SRL ++   +D  +
Sbjct: 312 ITNPVPDLTGYITEGQITLSRDLSRKDIYPEVDVLLSLSRLMNQGIGSDHTR 363


>gi|305671685|gb|ADM63152.1| ATP synthase beta subunit [Dipelta yunnanensis]
          Length = 489

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDKHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|170293991|gb|ACB13089.1| ATP synthase beta subunit [Microthamnion kuetzingianum]
          Length = 367

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +G  +  + I    P  ++       F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+ L+    +  AR+     V   +  ER RE  +   +         
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIARAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINE 138

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIR 267
           +N+ +S V  V    +E P  R    LTA+T+AEYF   SK D VLL +D+I RF  +  
Sbjct: 139 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDISKQD-VLLFIDNIFRFVQAGS 197

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R++E
Sbjct: 256 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKQTLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|145553116|ref|XP_001462233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430071|emb|CAK94860.1| unnamed protein product [Paramecium tetraurelia]
          Length = 499

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 160/312 (51%), Gaps = 39/312 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G PID    + +  +   I  + P  +++    +   TGI+V+D+  P   G 
Sbjct: 120 GRIMNVIGDPIDERGPI-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGG 178

Query: 163 RIGVFAGSGIGKSTLL--------------SMFA-RSDCFDKVIISLVGERGREVREFIE 207
           +IG+F G+G+GK+ L+              S+FA R+D + +++ S V            
Sbjct: 179 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGRNDLYHEMVASGV------------ 226

Query: 208 DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263
                NL    +  ++    +E P  R    LT +T+AEYF   +G +VLL +D+I RF 
Sbjct: 227 ----INLSGGSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFT 282

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ ++L +L ERI  +  +KG+IT+V ++ V  D+  DP
Sbjct: 283 QACSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAIYVPADDLTDP 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382
              +  + LD   VL+R+L E G YP VDPL S SR+ D     ++   V+  +  L+  
Sbjct: 341 APATTFAHLDATTVLSRALTELGIYPAVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQD 400

Query: 383 FEETRDIRLIGG 394
           ++  +DI  I G
Sbjct: 401 YKSLQDIIAILG 412


>gi|113910884|gb|ABI48174.1| ATPase beta subunit [Hedwigia ciliata]
          Length = 472

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|20467389|gb|AAL27825.1| ATPase beta subunit [Ephedra andina]
          Length = 461

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 83  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 139

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         +   VGER RE  +   +     +  
Sbjct: 140 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 199

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 200 EKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 259

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 260 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 317

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 318 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 377

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 378 QDIIAILG 385


>gi|20467369|gb|AAL27815.1| ATPase beta subunit [Ephedra frustillata]
          Length = 458

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 80  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 136

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         +   VGER RE  +   +     +  
Sbjct: 137 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 196

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 197 EKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 256

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 257 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 314

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 315 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 374

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 375 QDIIAILG 382


>gi|330996920|ref|ZP_08320785.1| ATP synthase F1, beta subunit [Paraprevotella xylaniphila YIT
           11841]
 gi|329571994|gb|EGG53665.1| ATP synthase F1, beta subunit [Paraprevotella xylaniphila YIT
           11841]
          Length = 507

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 164/330 (49%), Gaps = 44/330 (13%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV+N +G  IDG  +L +   S  I    P   +    ++   TGI+VID+  P 
Sbjct: 91  AQIRGRVMNVVGDAIDGMPALDESGAS-PIHRDPPKFEDLSTTQEVLFTGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
             G +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  
Sbjct: 150 LKGGKIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESG 207

Query: 210 L---GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF 245
           +   GD   KS+                     +V    +E P  R    L+ +T+AE F
Sbjct: 208 VIKYGDEFLKSMEAGHWDLSKVDMNEVEKSQVAMVFGQMNEPPGARSSVALSGLTLAESF 267

Query: 246 --SSKGD---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
             ++KGD   ++L  +D+I RF  +  E++   G +P A GY  ++ SE+ ++ ERI  +
Sbjct: 268 RDNNKGDGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGQMQERI--T 325

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+
Sbjct: 326 STKNGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRI 385

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            D      E  +    +  ++ R +E +DI
Sbjct: 386 LDPLIVGQEHYETAQRVKQILQRNKELQDI 415


>gi|21684869|emb|CAD11561.1| ATP synthase beta subunit [Anarthria scabra]
          Length = 491

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGKPVD---NLGPVDTSTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 215 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKLNVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQKVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|7708141|emb|CAB89940.1| ATP synthase beta subunit [Afrostyrax sp. Cheek 5007]
          Length = 491

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 22/306 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 102 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 217

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 218 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +  +    DE  K    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKTAQRVKQTLQRY 395

Query: 384 EETRDI 389
           +E +DI
Sbjct: 396 KELQDI 401


>gi|20092952|ref|NP_619027.1| V-type ATP synthase subunit B [Methanosarcina acetivorans C2A]
 gi|25091536|sp|Q8TIJ0|VATB_METAC RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|19918265|gb|AAM07507.1| H(+)-transporting ATP synthase, subunit B [Methanosarcina
           acetivorans C2A]
          Length = 460

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 30/351 (8%)

Query: 60  GQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG--- 115
           GQV+  + DIV +    G G       ++F     ++  S    GR+++  G P DG   
Sbjct: 42  GQVLDSSSDIVVVQVFEGTGGLDKDCGVIFTGETLKLPASIDLLGRILSGSGDPRDGGPR 101

Query: 116 ---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFAGSG 171
              D  L     +M   +++PP        K F +TGI  ID    L  GQ++ +F+ SG
Sbjct: 102 IVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRGQKLPIFSASG 153

Query: 172 IGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224
           +  + +    AR      S+    V+ + +G    E + F+ D+     L+++VV +  +
Sbjct: 154 LPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFLNLA 213

Query: 225 DESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           D+  + R + P  A+T AEY +   G +VL+IL  IT +A ++R++     E+P  RGYP
Sbjct: 214 DDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEVPGRRGYP 273

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
             ++++L  L ER G  +  KG++T +  + + GD+   PI D    I +G IV+ R L 
Sbjct: 274 GYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITEGQIVVARELH 333

Query: 344 EEGRYPPVDPLASVSRLADKAW----SADEKKLVSSLTHLIHRFEETRDIR 390
            +G YPP++ L S+SRL +       + ++ K VS    +   + E RD+R
Sbjct: 334 RKGIYPPINVLPSLSRLMNSGIGPGKTREDHKAVSD--QMYAGYAEGRDLR 382


>gi|153806532|ref|ZP_01959200.1| hypothetical protein BACCAC_00796 [Bacteroides caccae ATCC 43185]
 gi|149131209|gb|EDM22415.1| hypothetical protein BACCAC_00796 [Bacteroides caccae ATCC 43185]
          Length = 505

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 162/330 (49%), Gaps = 52/330 (15%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N +G  IDG   L  KG  S+    + PP   +   V++   TGI+VID+  P   
Sbjct: 93  GRLMNVVGDSIDGMKELDRKGAYSIH---RDPPKFEDLTTVQEVLFTGIKVIDLLEPYAK 149

Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE---- 207
           G +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE    
Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVI 207

Query: 208 --------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF 245
                               DY  + L+KS V  +    +E P  R    L+ +T+AE F
Sbjct: 208 RYGEAFKESMEKGDWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESF 265

Query: 246 SSKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
              G      ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +
Sbjct: 266 RDAGSEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--T 323

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              KG+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPLAS SR+
Sbjct: 324 STRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRI 383

Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            D      E       +  ++ R +E +DI
Sbjct: 384 LDPHIVGQEHYDTAQRVKQILQRNKELQDI 413


>gi|113910828|gb|ABI48146.1| ATPase beta subunit [Pallavicinia lyellii]
          Length = 472

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDTGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAISG 387


>gi|113910752|gb|ABI48108.1| ATPase beta subunit [Sphaerocarpos donnellii]
          Length = 457

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 68  ATLGRIFNVLGEPVD---NLGPVDVSTIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 124

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 125 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 184

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 185 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 244

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 245 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 302

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 303 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 361

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 362 KELQDIIAILG 372


>gi|6688861|emb|CAB65308.1| ATP synthase beta subunit [Nolana humifusa]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|6688962|emb|CAB65337.1| ATP synthase beta subunit [Petunia axillaris]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718149|gb|AAK72813.1| ATP synthase beta subunit [Nolana humifusa]
          Length = 483

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 206

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 207 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 384

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 385 ELQDIIAILG 394


>gi|156530117|gb|ABU75155.1| AtpB [Castela erecta]
          Length = 493

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D +GQ+I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 45  KSRDTVGQLINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 104

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I  + P  +        F+TGI+V+D+  P   G 
Sbjct: 105 IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 161

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 162 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 221

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 222 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 281

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 282 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 339

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 340 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 399

Query: 390 RLIGG 394
             I G
Sbjct: 400 IAILG 404


>gi|44885328|dbj|BAD11907.1| ATP synthase beta subunit [Nitella flexilis]
          Length = 340

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D ++      P PA  +   +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTITFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|255961390|ref|YP_003097583.1| ATP synthase CF1 subunit beta [Dendrocalamus latiflorus]
 gi|255040267|gb|ACT99927.1| ATP synthase CF1 subunit beta [Dendrocalamus latiflorus]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|118917408|dbj|BAF40512.1| ATP synthase beta subunit [Aristogeitonia monophylla]
          Length = 480

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +      + F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLEIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 204 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L      +D  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGSDHYETAQKVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|61968315|gb|AAX57084.1| ATP synthase beta subunit [Savia dictyocarpa]
          Length = 479

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     RE  E  
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYREMKESG 208

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +   +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 209 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|5758916|gb|AAD50890.1| ATP synthase beta subunit [Strelitzia nicolai]
          Length = 496

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|73920440|sp|Q4J8L8|VATB_SULAC RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
          Length = 466

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 19/307 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+   LG+P+D    +  G+      S + P++ R+  E+  +TG+  ID  T 
Sbjct: 87  SEEMLGRIFTPLGEPLDNGPQVLSGEKRDINGSPLNPSV-REYPEEFIQTGVSAIDGLTS 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208
           L  GQ++ +F+GSG+  + L +  A+            V+ + +G R  E    R F E+
Sbjct: 146 LLRGQKLPIFSGSGLPANQLAAQIAKQATVRGEESNFAVVFAAIGIRYDEALFFRRFFEE 205

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
               N  +  + V  +++ P L+ + P TA+T+AEY + + D ++L IL  +T +  ++R
Sbjct: 206 TGAIN--RVAMFVTLANDPPSLKILTPKTALTLAEYLAYEKDMHILAILIDMTNYCEALR 263

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ +  E+P   GYP  ++++L    ER G    +KG+IT +  + +  D+   PI D 
Sbjct: 264 ELSASKEEVPGRGGYPGYMYTDLAVTYERAGKVRGKKGSITQMPILTMPNDDITHPIPDL 323

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA----DKAWSADEKKLVSSLTHLIHRF 383
              I +G IVL+RSL  +G YPP++ LAS+SRL      +  + D+ K +S+   L   +
Sbjct: 324 TGYITEGQIVLDRSLFNKGIYPPINVLASLSRLMRDGIGEGKTRDDHKDLSN--QLFAAY 381

Query: 384 EETRDIR 390
              +DIR
Sbjct: 382 ARAQDIR 388


>gi|113910848|gb|ABI48156.1| ATPase beta subunit [Polytrichum juniperinum]
          Length = 448

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 183 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|116254139|ref|YP_769977.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv. viciae
           3841]
 gi|118573731|sp|Q1MAZ2|ATPB_RHIL3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115258787|emb|CAK09893.1| putative ATP synthase beta chain [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 478

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I    P  + +    +   TGI+V+D+  P   G
Sbjct: 93  LGRIMNVIGEPVDEAGPLVTAH-KRAIHQDAPSYVEQSTESQILVTGIKVVDLLAPYARG 151

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  N+ K 
Sbjct: 152 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKH 210

Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                  + +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 211 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 270

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   +  
Sbjct: 271 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 329 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 388

Query: 389 IRLIGG 394
           I  I G
Sbjct: 389 IIAILG 394


>gi|62902813|gb|AAY19321.1| ATP synthase beta subunit [Lepidobotrys staudtii]
          Length = 480

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDSKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|253729564|ref|YP_003029747.1| AtpB [Bambusa oldhamii]
 gi|246367074|gb|ACS94685.1| AtpB [Bambusa oldhamii]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|164566089|gb|ABY61187.1| ATP synthase beta subunit [Danaea grandifolia]
 gi|164566091|gb|ABY61188.1| ATP synthase beta subunit [Danaea grandifolia]
 gi|164566125|gb|ABY61205.1| ATP synthase beta subunit [Danaea nodosa]
          Length = 394

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|8452749|emb|CAB89990.1| ATP synthase beta subunit [Simarouba glauca]
          Length = 477

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               G + N LG+P+D   +LG  B  +   + K  PA  +   +   F+TGI+V+B+  
Sbjct: 90  GATLGXIFNVLGEPVD---NLGPVBTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVBLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|62902843|gb|AAY19336.1| ATP synthase beta subunit [Stackhousia monogyna]
          Length = 488

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELETKFSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|7708262|emb|CAB90053.1| ATP synthase beta subunit [Cyrilla racemiflora]
          Length = 464

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 192

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 193 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 252

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 253 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 310

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R
Sbjct: 311 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQR 370

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 371 YKELQDIIAILG 382


>gi|7019707|emb|CAB75846.1| ATP synthase beta chain [Amphidinium operculatum]
          Length = 548

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 144/270 (53%), Gaps = 22/270 (8%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
           F+TGI+V+D+ TP   G ++G+F G+G+GK+ L+    R+  +    +SL   +GER RE
Sbjct: 208 FETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRNLAYSHNGLSLFSGIGERSRE 267

Query: 202 VREFIEDYLGDNL---------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             +   +     +                K  +V    +++P  R      A+T+AEYF 
Sbjct: 268 ANDLYVEMQESGIILLAEDSSNPYFSAESKVALVFGQMNDTPGARFRVANAALTMAEYFR 327

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G ++L+ +D+I RF  +  E++T  G +P A GY  ++ +E+  L ERI P+    G
Sbjct: 328 DVNGQDLLVFMDNIFRFVQAGSELSTLLGRMPSAVGYQPTLATEMGTLQERIVPT--LFG 385

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   ++ + LD   VL+R LA +G YP VDPLAS S+    ++
Sbjct: 386 SITSIQAVYVPADDITDPAPVAIFTHLDAITVLSRGLAAKGIYPAVDPLASTSKALTASF 445

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +    +  S+   ++R++E +D+  I G
Sbjct: 446 VGERHYNVAQSIIQCLNRYKELQDLIAILG 475


>gi|11467384|ref|NP_043241.1| ATP synthase CF1 beta subunit [Cyanophora paradoxa]
 gi|1352028|sp|P48081|ATPB_CYAPA RecName: Full=ATP synthase subunit beta, cyanelle; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1016185|gb|AAA81272.1| beta subunit of the F1 portion of ATP synthase [Cyanophora
           paradoxa]
          Length = 485

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 22/303 (7%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D    LG    D ++ I    P     +     F+TGI+V+D+  P   
Sbjct: 98  GRIFNVLGEPVD---ELGAVVCDSTLPIHRPSPAFTQLETKSSIFETGIKVVDLLAPYRR 154

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  + D
Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESKVID 213

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 ENNLPASKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +   KG+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTTKGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386
             + LD   VL+R+LA +G YP VDPL S S +       ++    +  +  ++ R++E 
Sbjct: 332 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVGEKHYACAQRVKGILQRYKEL 391

Query: 387 RDI 389
           +DI
Sbjct: 392 QDI 394


>gi|294101976|ref|YP_003553834.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM
           12261]
 gi|293616956|gb|ADE57110.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM
           12261]
          Length = 459

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 18/351 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR--FRISPSACWCGRVINALGKPIDGDD 117
           GQ+++I  DI  I        ++ G+      R   ++       G+V+N  G+ IDG  
Sbjct: 44  GQILQIQDDICVIQVFDGTMGLNTGETTVWLERDVVKMPVGLSLVGQVLNGRGRSIDGTP 103

Query: 118 -SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            S    DL +  M   P  + R       +TGI  ID+   L  GQ++ +F+GSG+  + 
Sbjct: 104 LSFIDKDLPITGMPINP--VRRTSPNAYVETGISSIDMMNTLVRGQKLPIFSGSGLPANE 161

Query: 177 LLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           + +   +            VI + +G   RE R FI+ +     +   +  +  + +S +
Sbjct: 162 IAAQIVQQAAVPGRETDFLVIFAAMGITRREARYFIDTFESTGAINNGIFFMNLASDSAV 221

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R + P  A+T AEYF+  KG +VL+I+  +  +  S+REI+    E+P  RGYP  ++S
Sbjct: 222 ERLLTPRMALTAAEYFAFEKGYDVLVIMTDMLYYCESLREISAAREEVPGRRGYPGYMYS 281

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  E  +G+IT +  + +  D+   P+ D    I +G IVL+R + + G Y
Sbjct: 282 DLAEIYERAGCVENCQGSITQIPIITMPDDDMTHPVVDLSGYITEGQIVLDRGIHDRGAY 341

Query: 349 PPVDPLASVSRLADKAWSADE-----KKLVSSLTHLIHRFEETRDIRLIGG 394
           PP++ L S+SRL +K     +     + L   L     R  E   +RLI G
Sbjct: 342 PPINVLPSLSRLMNKGIGKGKTFDYHRALADQLYASYARALELSRLRLIVG 392


>gi|288803179|ref|ZP_06408614.1| ATP synthase F1, beta subunit [Prevotella melaninogenica D18]
 gi|302346236|ref|YP_003814534.1| ATP synthase F1, beta subunit [Prevotella melaninogenica ATCC
           25845]
 gi|288334440|gb|EFC72880.1| ATP synthase F1, beta subunit [Prevotella melaninogenica D18]
 gi|302151189|gb|ADK97450.1| ATP synthase F1, beta subunit [Prevotella melaninogenica ATCC
           25845]
          Length = 507

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GR++N +G+PIDG ++L     SME    I  + P   +    ++  +TGI+VID+  P 
Sbjct: 95  GRMMNVIGQPIDGMEAL-----SMEGAYPIHREAPKFEDLSTHKEMLQTGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L     
Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVI 209

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247
             G+  +K++                     +V    +E P  R    L+ +T+AE F  
Sbjct: 210 RYGEKFRKAMDEGKWDLSLVDQEELQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269

Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            G       +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 270 HGGKNGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGTMQERI--TS 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ 
Sbjct: 328 TKHGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387

Query: 362 DKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           D      D  +    +  L+  + E +DI  I G
Sbjct: 388 DPLIVGKDHYECAQRVKQLLQHYNELQDIIAILG 421


>gi|139389271|ref|YP_001123037.1| ATPase beta subunit [Aethionema grandiflorum]
 gi|190358250|sp|A4QJK6|ATPB_AETGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286233|dbj|BAF49861.1| ATPase beta subunit [Aethionema grandiflorum]
          Length = 490

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D LG+ I +  ++        V    +   E +  G D+V       +       GR
Sbjct: 50  KGRDTLGEEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGTPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|57868950|gb|AAW57471.1| ATP synthase beta subunit [Rhododendron impeditum]
          Length = 493

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPLDTRTTSPIHRSAPAFIELETKLLIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKET 215

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 216 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 275

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 276 QAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 333

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  K+   +   + R
Sbjct: 334 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQRVKQTLQR 393

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 394 YKELQDIIAILG 405


>gi|183206658|gb|ACC54527.1| ATP synthase beta subunit [Legousia hybrida]
          Length = 497

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+ ID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGETID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 218

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 219 GVINEEKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 278

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 279 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 336

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R
Sbjct: 337 APATTFAHLDATTVLSRGLAAKGIYPAVDPLXSTSTMLQPRVVSDEHYKTAQSVKQTLQR 396

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 397 YKELQDIITILG 408


>gi|155029339|dbj|BAF75553.1| ATP synthase beta subunit [Elateriospermum tapos]
          Length = 486

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +
Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|195183499|dbj|BAG66963.1| ATP synthase beta subunit [Hybanthus bigibbosus]
          Length = 489

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 175/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 42  KGRDTIGQQINVTCEVQQLLGNNRVRTVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++         +
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEE 217

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E+
Sbjct: 218 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +        E  +    +   + R++E +D
Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGKEHYETAQRVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IITILG 401


>gi|34420414|gb|AAQ67449.1| ATP synthase beta [Drosophila melanogaster]
          Length = 379

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 136/252 (53%), Gaps = 15/252 (5%)

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178
           D +  I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+    
Sbjct: 12  DKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 71

Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILR 231
           +  A++     V    VGER RE      E IE     L D   K  +V    +E P  R
Sbjct: 72  NNVAKAHGGYSVFAG-VGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGAR 130

Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 131 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 190

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP 
Sbjct: 191 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 248

Query: 351 VDPLASVSRLAD 362
           VDPL S SR+ D
Sbjct: 249 VDPLDSTSRIMD 260


>gi|62085186|gb|AAX62997.1| ATP synthase beta subunit [Pogonophora schomburgkiana]
          Length = 482

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|150035723|gb|ABR67207.1| ATP synthase beta subunit [Phragmites australis]
          Length = 472

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 196 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 314 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|14718099|gb|AAK72789.1| ATP synthase beta subunit [Koeberlinia spinosa]
          Length = 480

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|16416732|gb|AAL18390.1|AF313542_1 ATP synthase beta chain [Equisetum telmateia]
          Length = 395

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 163/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + + +  I    P  M+ +     F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVEATTKSPIHKPAPAFMDLETKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESKVI 122

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 123 NEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R++
Sbjct: 241 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEVAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 300 ELQDIIAILG 309


>gi|28261724|ref|NP_783239.1| ATP synthase CF1 beta subunit [Atropa belladonna]
 gi|50400576|sp|Q8S8W8|ATPB_ATRBE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|20068338|emb|CAC88051.1| ATPase beta subunit [Atropa belladonna]
          Length = 498

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|126662937|ref|ZP_01733935.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126624595|gb|EAZ95285.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 503

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 157/330 (47%), Gaps = 40/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N +G  IDG   L K G   + I    P   +     +   TGI+VID+  P   G
Sbjct: 91  GRLFNVIGDAIDGLGDLPKAGANGLPIHRTAPKFEDLSTSSEVLFTGIKVIDLIEPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E       
Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210

Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
                            D  G    K+  V    +E P  R    L+ ++IAEYF     
Sbjct: 211 DDFMHSMENGGWDLSKVDMPGMRESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGAG 270

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
           S +G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +KG
Sbjct: 271 SDQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 328

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR L  + 
Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 388

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
              +       +  ++ ++++ +DI  I G
Sbjct: 389 LGNEHYDCAQRVKEILQKYKQLQDIIAILG 418


>gi|68139363|gb|AAY86046.1| ATP synthase beta subunit [Cananga odorata]
          Length = 454

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 76  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 132

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 133 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 192

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    G +VLL +D+I RF  
Sbjct: 193 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 252

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 253 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 310

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 311 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 370

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 371 KELQDIIAILG 381


>gi|62085232|gb|AAX63018.1| ATP synthase beta subunit [Ruptiliocarpon caracolito]
          Length = 490

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|288559959|ref|YP_003423445.1| A1A0 archaeal ATP synthase subunit B AhaB [Methanobrevibacter
           ruminantium M1]
 gi|288542669|gb|ADC46553.1| A1A0 archaeal ATP synthase subunit B AhaB [Methanobrevibacter
           ruminantium M1]
          Length = 461

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 11/307 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I  S    GR+ +  GKPIDG   +   +  ++I        +R+   +  +TGI  ID
Sbjct: 83  KIGVSKDMMGRIFDGTGKPIDGGPEIIP-EQELDINGNPMNPASREFPAEFIQTGISTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIE 207
               L  GQ++ +F+GSG+  + L +  AR      SD    VI + +G    E   F+ 
Sbjct: 142 GMNTLVRGQKLPIFSGSGLPHNDLAAQIARQAKVVGSDDDFAVIFAAMGITHEEANFFMR 201

Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265
           D+     L+K  V +  +D+  I R + P  A+T AEY + + G +VL+IL  ++ +  +
Sbjct: 202 DFERTGALEKVTVFMNLADDPAIERILTPKMALTTAEYMAFELGMHVLVILTDLSNYCEA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI+    E+P  RGYP  ++++L  + ER G    ++G+IT +  +++  D+   PI 
Sbjct: 262 LREISAARDEVPGRRGYPGYMYTDLAGIYERAGRIAGKEGSITQMPILVMPQDDITHPIP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRF 383
           D    I +G IVL+R +  +G YPPVD L S+SRL       D+ +   S     L   +
Sbjct: 322 DLTGYITEGQIVLSRDIHRKGIYPPVDVLPSLSRLMSGGIGGDKTRDDHSGVSDQLYSAY 381

Query: 384 EETRDIR 390
            E R++R
Sbjct: 382 AEGRNLR 388


>gi|209551224|ref|YP_002283141.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226740665|sp|B5ZSN7|ATPB_RHILW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|209536980|gb|ACI56915.1| ATP synthase F1, beta subunit [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 478

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I    P  + +    +   TGI+V+D+  P   G
Sbjct: 93  LGRIMNVIGEPVDEAGPLVTAH-KRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYARG 151

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   + +  N+ K 
Sbjct: 152 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKH 210

Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                  + +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +  E+
Sbjct: 211 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 270

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   +  
Sbjct: 271 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 329 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 388

Query: 389 IRLIGG 394
           I  I G
Sbjct: 389 IIAILG 394


>gi|75332718|sp|Q95DR6|ATPB_AGAAF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943654|emb|CAD10751.1| ATP synthase, beta subunit [Agapanthus africanus]
          Length = 498

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G      RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVSERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|282882839|ref|ZP_06291444.1| V-type ATP synthase beta chain 2 [Peptoniphilus lacrimalis 315-B]
 gi|281297250|gb|EFA89741.1| V-type ATP synthase beta chain 2 [Peptoniphilus lacrimalis 315-B]
          Length = 462

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 21/374 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSD--NLGQVIRI--NLDIVYICPVGIGEEISLGDLVFHWG 91
           VT L Q V  G+ V  + K +D   +G+V++I  N  +V +    +G   +   L F   
Sbjct: 18  VTNLHQ-VSYGEVVKIKSKTTDETQVGEVVKIDDNKALVQVYGTNMGVSGNNTGLEFTGV 76

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
            F +  S    GRV N + KPID    +  G         + P + R+      +TGI  
Sbjct: 77  PFEVPLSKEILGRVFNGIAKPIDRGGDIYSGKFYNVSGRPINP-VAREYPRNFIQTGISS 135

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DK-----VIISLVGERGREVRE 204
           ID    L  GQ++ +F+GSG+  + L +   R      DK     ++ + +G +  E   
Sbjct: 136 IDGLMTLIRGQKLPIFSGSGLDHNQLAAQIVRQAKISGDKNENFAIVFAAIGVKHDEADF 195

Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRF 262
           F E +    + + VV+     + PI+ ++  P  A+T AEY +  +  +VL+I+  IT +
Sbjct: 196 FREAFKNAGVNERVVMYINYADDPIMERLITPKCALTAAEYLAYEENTHVLVIMTDITSY 255

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A ++RE+++   E+P  +GYP  ++S+L  L ER G  +   G++T +  + +  D+   
Sbjct: 256 AEALREVSSGREEVPSRKGYPGHLYSDLAALYERAGMIKGIDGSVTLIPILTMPSDDITH 315

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTH 378
           PIAD    I +G IVL+R L     YPP++ L S+SRL      + ++ ++   +S+   
Sbjct: 316 PIADLTGYITEGQIVLSRDLQGSDIYPPINILPSLSRLMKDGIGEGYTREDHADLSA--Q 373

Query: 379 LIHRFEETRDIRLI 392
           L   +   +D+R +
Sbjct: 374 LFSSYSRVQDVRAL 387


>gi|44885376|dbj|BAD11931.1| ATP synthase beta subunit [Nitella moriokae]
 gi|44885378|dbj|BAD11932.1| ATP synthase beta subunit [Nitella moriokae]
          Length = 340

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|305671645|gb|ADM63132.1| ATP synthase beta subunit [Weigela hortensis]
          Length = 489

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++     
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFGGVGERTREGNDLYKEMKESG 212

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKRGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGDKHYQTAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|150035715|gb|ABR67203.1| ATP synthase beta subunit [Chasmanthium latifolium]
          Length = 422

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 156 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 333

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 334 KELQDIIAILG 344


>gi|164566071|gb|ABY61178.1| ATP synthase beta subunit [Danaea moritziana]
          Length = 394

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|19033069|gb|AAL83519.1|AF408791_1 ATP synthase beta subunit [Coleochaete sieminskiana]
          Length = 402

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D + +  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDTTKVSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INSDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKKTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|87043021|ref|YP_492635.1| ATP synthase F0 subunit 1 [Dictyostelium citrinum]
 gi|122110182|sp|Q2LCQ7|ATPAM_DICCI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|84682121|gb|ABC60386.1| ATPase subunit 1 [Dictyostelium citrinum]
          Length = 519

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 201/424 (47%), Gaps = 27/424 (6%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           TL  ++  Y K L ++ G +         V+ LSQ + +G+ V   GKN   +     +N
Sbjct: 35  TLNNVSNKYGKVLFIKDGVVK--------VSGLSQ-IKIGEKVEFVGKNLFGMA----LN 81

Query: 67  LDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG--K 121
           L+   +  V  GE+ ++  G +V    + F I       GRV++ LG+PIDG   L   K
Sbjct: 82  LEATSVGIVIFGEDTAIYEGVIVKRCEQNFAIKVDKTMLGRVVDVLGQPIDGLGELKDTK 141

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M +  K P  + R+ V +   TG++++D   P+  GQR  +      GKS +    
Sbjct: 142 TTRVMSVERKAPGIVTRKSVHESMLTGVKMVDALLPIGRGQRELIIGDRQTGKSAIAVDA 201

Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLT 237
             +   +K I+ +   VG++   VR  +E       L+ ++VVV+T+ ++  L+ +AP T
Sbjct: 202 ILNQQVNKDIVCIYVAVGQKKSTVRRLVEMLNTKGALEYTIVVVSTASDAAPLQFLAPYT 261

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
             TI EYF  +G + L++ D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 262 GCTIGEYFRDEGKHALIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERA 321

Query: 298 GPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
               ++   G++TA   V     + +  I  ++ SI DG I L + L  +G  P V+   
Sbjct: 322 AKLNEKYGCGSLTAFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGL 381

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A SA  KKL  +L   + ++   R++     +    D +  + + +  +  +
Sbjct: 382 SVSRVGSAAQSAVMKKLAGALKLELAQY---RELARFEQFSSNADAVTTQILKKGKLTIE 438

Query: 416 FLKQ 419
            LKQ
Sbjct: 439 LLKQ 442


>gi|323148837|ref|YP_004221930.1| ATP synthase CF1 beta subunit [Erodium carvifolium]
 gi|316926301|gb|ADU58154.1| ATP synthase CF1 beta subunit [Erodium carvifolium]
          Length = 498

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|281190731|ref|YP_003330968.1| ATP synthase CF1 beta subunit [Parthenium argentatum]
 gi|269924844|gb|ACZ52717.1| ATP synthase CF1 beta subunit [Parthenium argentatum]
          Length = 498

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G D++       +       GR
Sbjct: 50  KGRDTVGQSINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|260576484|ref|ZP_05844474.1| ATP synthase F1, beta subunit [Rhodobacter sp. SW2]
 gi|259021367|gb|EEW24673.1| ATP synthase F1, beta subunit [Rhodobacter sp. SW2]
          Length = 476

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR++N +G+P+D    +   +     + +  PA + Q  E     TGI+VID+  P 
Sbjct: 86  ATLGRILNVIGEPVDEKGPVNATE--YRAIHQPAPAFSEQATESLILVTGIKVIDLLAPY 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG-- 211
             G +IG+F G+G+GK+ L+     +    KV     + + VGER RE  +   + +   
Sbjct: 144 SKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
               DNL +S V  V    +E P  R    L+ +T+AE F  + G +VL  +D+I RF  
Sbjct: 202 VINIDNLAESKVALVYGQMNEPPGARLRVALSGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V ++ V  D+  DP 
Sbjct: 262 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R+++E G YP VDPL S SR+ D      E  +   ++  ++ R+
Sbjct: 320 PATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPVVVGVEHYETARAVQGVLQRY 379

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 380 KSLQDIIAILG 390


>gi|110915580|gb|ABH02578.1| ATP synthase beta subunit [Aniselytron treutleri]
          Length = 490

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  +  +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSXLLGRMPXAXGYQPTFSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAIXG 401


>gi|325297375|ref|YP_004257292.1| ATP synthase subunit beta [Bacteroides salanitronis DSM 18170]
 gi|324316928|gb|ADY34819.1| ATP synthase subunit beta [Bacteroides salanitronis DSM 18170]
          Length = 509

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N +G  IDG   L K +    I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 96  GRVMNVVGDAIDGMKELDKAE-GFPIHREPPKFEDLATSQEVLFTGIKVIDLLEPYLKGG 154

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 155 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 212

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248
           GD   KS+                     +V    +E P  R+   L+ +T+AE F  + 
Sbjct: 213 GDEFLKSMEEGNWDLSKVDYKEVEKSQVSMVFGQMNEPPGARQSVALSGLTLAESFRDRD 272

Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            G+N    +L  +D+I RF  +  E++   G +P A GY  ++ +E+ ++ ERI  +  +
Sbjct: 273 TGENGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 330

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D 
Sbjct: 331 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKIAELGIYPAVDPLDSTSRILDP 390

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E       +  ++ R +E +DI
Sbjct: 391 LVVGKEHYDTAQRVKQILQRNKELQDI 417


>gi|164566133|gb|ABY61209.1| ATP synthase beta subunit [Danaea simplicifolia]
 gi|164566137|gb|ABY61211.1| ATP synthase beta subunit [Danaea simplicifolia]
          Length = 394

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|157689150|gb|ABV65131.1| ATP synthase CF1 beta subunit [Bulnesia arborea]
          Length = 491

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GVTLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINETNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQQVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|323715494|gb|ADY04815.1| ATP synthase beta subunit [Schizophragma hydrangeoides]
          Length = 483

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+ TP 
Sbjct: 93  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLTPY 151

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 389

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 390 LQDIIAILG 398


>gi|262340861|ref|YP_003283716.1| ATP synthase F1 subunit beta [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272198|gb|ACY40106.1| ATP synthase F1 subunit beta [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 501

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 156/334 (46%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GRV N LG  IDG      GD+   I   +   PPA      E     TGI+VID+  P 
Sbjct: 93  GRVFNVLGNCIDG-----LGDIDRSITRPIHSEPPAFKDLSTETEILYTGIKVIDLIEPY 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE----VREFIEDYL- 210
             G +IG+F G+G+GK+ L+     +       + + + VGER RE    +RE +E  + 
Sbjct: 148 PKGGKIGLFGGAGVGKTVLIQELINNVAKGHGGRSVFAGVGERSREGNDLLREMLESGII 207

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-- 245
             GD+  KS+                      V    +E P  R    L+ +T+AEY+  
Sbjct: 208 KYGDSFMKSMRKGYWDISKIDKEALKESKAAFVFGQMNEPPGARARVALSGLTLAEYYRD 267

Query: 246 ----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                 KG +VL  +D+I RF  +  E++   G +P + GY  ++ SE+  + ERI  + 
Sbjct: 268 QYVEGKKGQDVLFFIDNIFRFTQAGSEVSALLGRIPSSVGYQPTLSSEMGSMQERI--TS 325

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-L 360
            +KG+IT+V +V V  D+  DP      S LD   VL+R +A  G YP VDPL S SR L
Sbjct: 326 TKKGSITSVQAVYVPADDLTDPAPSITFSHLDATTVLSRKIASLGIYPAVDPLDSTSRIL 385

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +      D       +  ++ ++   +DI  I G
Sbjct: 386 SPDIIDKDHYNCAQRVKEILQKYNSLQDIIAILG 419


>gi|20467361|gb|AAL27811.1| ATPase beta subunit [Ephedra gerardiana]
          Length = 429

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 67  LGRIFNVLGEPVD---DLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 123

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 124 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 182

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 183 NEKNIIXSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 242

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 243 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 300

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       ++  ++   +   + R++E
Sbjct: 301 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMXQPRIVGEKHYEIAQEVKQTLQRYKE 360

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 361 LQDIIAILG 369


>gi|21684891|emb|CAD11572.1| ATP synthase beta subunit [Paepalanthus fasciculatus]
          Length = 485

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGDPID---NLGPVDSSATSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGNEHYEIAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|70607285|ref|YP_256155.1| V-type ATP synthase subunit B [Sulfolobus acidocaldarius DSM 639]
 gi|68567933|gb|AAY80862.1| V-type ATP synthase beta chain [Sulfolobus acidocaldarius DSM 639]
          Length = 452

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 19/307 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+   LG+P+D    +  G+      S + P++ R+  E+  +TG+  ID  T 
Sbjct: 73  SEEMLGRIFTPLGEPLDNGPQVLSGEKRDINGSPLNPSV-REYPEEFIQTGVSAIDGLTS 131

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208
           L  GQ++ +F+GSG+  + L +  A+            V+ + +G R  E    R F E+
Sbjct: 132 LLRGQKLPIFSGSGLPANQLAAQIAKQATVRGEESNFAVVFAAIGIRYDEALFFRRFFEE 191

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
               N  +  + V  +++ P L+ + P TA+T+AEY + + D ++L IL  +T +  ++R
Sbjct: 192 TGAIN--RVAMFVTLANDPPSLKILTPKTALTLAEYLAYEKDMHILAILIDMTNYCEALR 249

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ +  E+P   GYP  ++++L    ER G    +KG+IT +  + +  D+   PI D 
Sbjct: 250 ELSASKEEVPGRGGYPGYMYTDLAVTYERAGKVRGKKGSITQMPILTMPNDDITHPIPDL 309

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA----DKAWSADEKKLVSSLTHLIHRF 383
              I +G IVL+RSL  +G YPP++ LAS+SRL      +  + D+ K +S+   L   +
Sbjct: 310 TGYITEGQIVLDRSLFNKGIYPPINVLASLSRLMRDGIGEGKTRDDHKDLSN--QLFAAY 367

Query: 384 EETRDIR 390
              +DIR
Sbjct: 368 ARAQDIR 374


>gi|256751891|ref|ZP_05492762.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749196|gb|EEU62229.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 459

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 26/365 (7%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +  G      GQV+ +N D  +V +     G  I+   + F      +  S    GRV +
Sbjct: 32  IETGTGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFD 91

Query: 108 ALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
            LG+P D      KG +      ++I         R    +  +TGI  ID    L  GQ
Sbjct: 92  GLGRPRD------KGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQ 145

Query: 163 RIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           ++ +F+GSG+  + L +  AR      SD    V+ + +G    E   FI D+     + 
Sbjct: 146 KLPIFSGSGLPHAQLAAQIARQAKVLGSDSKFAVVFAAMGITFEEADYFISDFRRTGAID 205

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274
           +SV+ +  +++  I R   P  A+T AE+ +  K  +VL+I+  +T +  ++RE++    
Sbjct: 206 RSVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARK 265

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  RGYP  ++++L  + ER G  +  KG+IT +  + +  D+   PI D    I +G
Sbjct: 266 EVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHPIPDLTGYITEG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI 389
            I+L+R L  +G YPP+D L S+SRL DK         D   L++ L     R ++ +++
Sbjct: 326 QIILSRDLYRKGIYPPIDVLPSLSRLKDKGIGQGKTREDHADLMNQLFASYARGKQAKEL 385

Query: 390 RLIGG 394
            +I G
Sbjct: 386 AVILG 390


>gi|292490912|ref|YP_003526351.1| H(+)-transporting two-sector ATPase [Nitrosococcus halophilus Nc4]
 gi|291579507|gb|ADE13964.1| H(+)-transporting two-sector ATPase [Nitrosococcus halophilus Nc4]
          Length = 475

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 22/333 (6%)

Query: 44  CLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP--- 97
             G+ VV   HQG+  +  GQVI  +   V    V I E     DL   W RF   P   
Sbjct: 26  AFGERVVVKDHQGRRRN--GQVILTSDKGVL---VQIFEGTDDLDLERTWVRFLEEPFEI 80

Query: 98  --SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
             S    GR+ + +G P D    +    L   +       + R   ++  +TGI  ID  
Sbjct: 81  PLSPDVLGRIFDGVGAPRDNRPPI-VAPLKRNVNGAPANPVARAYPQEFIQTGISTIDGL 139

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDY 209
             L  GQ++ +F+GSG+  + L +   R       +    V+ + +G    + R F E++
Sbjct: 140 NSLVRGQKLPIFSGSGLPHNRLAAQIVRQAKLLGEETRFVVVFAAMGVTYGDARFFQEEF 199

Query: 210 LGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
               +  +VV+ +  +D+ PI R + P TA+T AEY + + D +VL+++  +T +A ++R
Sbjct: 200 ESSGVLGNVVMYLNLADDPPIKRLILPRTALTCAEYLAFEQDLHVLVVMTDMTHYAEALR 259

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E+AT  G++P  +GYP  ++S+L  + ER G  +   G+IT V  V +  D+   PI D 
Sbjct: 260 EVATAKGDVPSRKGYPGYLYSDLAEIYERAGRIKNRHGSITMVPVVSMPSDDITHPIPDL 319

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              I +G IVL+R L  +G YPPV    S+SRL
Sbjct: 320 TGYITEGQIVLSRELYHQGIYPPVSIPPSLSRL 352


>gi|257066504|ref|YP_003152760.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaerococcus prevotii DSM 20548]
 gi|256798384|gb|ACV29039.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaerococcus prevotii DSM 20548]
          Length = 582

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 146/279 (52%), Gaps = 18/279 (6%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P M    +EK F+TG RV+D+F PL  G  + +  G G GK+ L    A+    D +I  
Sbjct: 195 PVMANMPIEKLFETGQRVLDVFFPLAKGGTVAIPGGFGTGKTMLQHQLAQYSDVDIIIYI 254

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ + +E++        G  L +  +++A +   P+  + A + T +T+AEYF
Sbjct: 255 GCGERGNEMTQVLEEFPDLIDPNTGKGLMERTILIANTSNMPVAAREASIYTGITMAEYF 314

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302
              G +V L+ DS +R+A ++REI+    E+P   GYP  + S L +  ER G  +    
Sbjct: 315 RDMGYDVALMADSSSRWAEALREISGRLEEIPAEEGYPAYLGSRLSQFYERAGYFKNLNG 374

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G++T + +V   G + ++P+ ++ R  ++  + L+R LA    YP ++ L+S S   +
Sbjct: 375 SEGSVTLIGAVSPSGGDFSEPVTENTRRCVNVFLGLDRKLAYSRHYPAINWLSSYSNYIE 434

Query: 363 KAWSADEKKL-------VSSLTHLIHRFEETRDIRLIGG 394
           K  +  E++L        + L +++   +E R I ++ G
Sbjct: 435 KIRAYYEERLGKDIIAIRNELMNVLLEEDEVRSIMMLVG 473


>gi|18860318|ref|NP_569636.1| ATP synthase CF1 beta subunit [Psilotum nudum]
 gi|20141186|sp|O03081|ATPB_PSINU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|18389471|dbj|BAB84223.1| ATP synthase beta subunit [Psilotum nudum]
          Length = 492

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D    I    P           F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPINADKKSSIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  
Sbjct: 219 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|313183924|ref|YP_004021778.1| ATP synthase CF1 beta subunit [Equisetum arvense]
 gi|281371644|gb|ADA63577.1| ATP synthase CF1 beta subunit [Equisetum arvense]
          Length = 489

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 162/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + + +  I    P  M  +     F+TGI+V+D+  P  
Sbjct: 101 LGRIFNVLGEPVD---NMGPVEATTKSPIHKPAPAFMELETKLSIFETGIKVVDLLAPYR 157

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 158 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESKVI 216

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 217 NEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 276

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 277 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 334

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R++
Sbjct: 335 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEVAQGVKQTLQRYK 393

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 394 ELQDIIAILG 403


>gi|167769512|ref|ZP_02441565.1| hypothetical protein ANACOL_00846 [Anaerotruncus colihominis DSM
           17241]
 gi|167668480|gb|EDS12610.1| hypothetical protein ANACOL_00846 [Anaerotruncus colihominis DSM
           17241]
          Length = 458

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 156/304 (51%), Gaps = 13/304 (4%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S     RV + LG+PIDG  + L +  L++  +   P A  R   ++  +TG+  ID   
Sbjct: 82  SEDMLSRVFDGLGRPIDGGPEILPEKRLNINGLPMNPAA--RNYPQEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F + + 
Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDEPFAVVFAAMGITFEEANFFTDSFR 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               L +S++ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A ++RE
Sbjct: 200 ETGALDRSIMFINLANDPAVERIATPKMALTAAEYLAFDKNMHVLVILTDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   PI D  
Sbjct: 260 ISAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITLIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
             I +G I+L+R L  +G  PP+D L S+SRL DK   A + +    +++  L   +   
Sbjct: 320 GYITEGQIILSRELYRKGIAPPIDVLPSLSRLKDKGIGAGKTRADHANTMNQLFAAYSRG 379

Query: 387 RDIR 390
           +D +
Sbjct: 380 KDAK 383


>gi|256828748|ref|YP_003157476.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577924|gb|ACU89060.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfomicrobium baculatum
           DSM 4028]
          Length = 585

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 187/386 (48%), Gaps = 14/386 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLG--DFVVHQGKNSDNLGQVIRI 65
           ++ + E ++  L ++   + +ITSV   +  +S    +G  + V+  G   D  G    +
Sbjct: 17  ISHVRETFTPQLTLR--EVGTITSVATGIAKVSGLPGVGYDELVMFPG---DVPGIAFNV 71

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + D + +  +G    +  GD V   GR   ++      GRVI+ LG+P+DG+  +  G+ 
Sbjct: 72  DEDEIGVVLLGEYWHLQAGDEVRRTGRVMDVAVGDSLLGRVIDPLGRPLDGNGPVA-GNR 130

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
            + +    PP M+R  V +  +TG++VID   P+  GQR  +      GK+ +   ++  
Sbjct: 131 RLPVERTAPPIMDRSPVTEPLQTGLKVIDALIPVGRGQRELILGDRQTGKTAIAMDTILN 190

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     +   +G+R   V + +     +  ++ +V+VV   ++ P L  +AP  A +I
Sbjct: 191 QRDQDVLCVYCAIGQRASAVAKAVATLQKNGAMEYTVIVVTEGNDPPGLAYIAPYAATSI 250

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF   G +VL++ D +T  A + RE++      P    +P  +F    RLLER     
Sbjct: 251 AEYFMEAGRDVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERATHLR 310

Query: 302 KEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +E   G++TA+  +  +  + +  I  ++ SI DG I L+ SL E G  P VD   SVSR
Sbjct: 311 EEAGGGSLTALPVIETEAQDISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGKSVSR 370

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  KA  A  + +   L     +FEE
Sbjct: 371 VGGKAQRAAYRAVAGDLKLAYAQFEE 396


>gi|113910826|gb|ABI48145.1| ATPase beta subunit [Pellia epiphylla]
          Length = 464

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 78  GRIFNVLGEPVD---NLGPVDANTTFPIHRCAPAFTQLDTKLSIFETGIKVVDLLAPYRR 134

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 135 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 194

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 195 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 254

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 255 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 312

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 313 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 371

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 372 QDIIAILG 379


>gi|6706178|emb|CAB65908.1| ATP synthase beta subunit [Gerbera jamesonii]
          Length = 490

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQQVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6017787|gb|AAF01628.1| ATP synthase beta subunit [Geranium cinereum]
          Length = 489

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 153/305 (50%), Gaps = 18/305 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID          S  I    P  +        F+TGI+V+D+  P 
Sbjct: 95  GATLGRIFNVLGEPIDNXXXXXXXTXS-PIHRSAPDFIQLDTKLSIFETGIKVVDLLAPY 153

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  +
Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGV 212

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
            ++ K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 213 INDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +   A+  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGAEHYETAQRVKQTLQRYK 390

Query: 385 ETRDI 389
           E +DI
Sbjct: 391 ELQDI 395


>gi|62902839|gb|AAY19334.1| ATP synthase beta subunit [Quetzalia occidentalis]
          Length = 480

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 87  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAPAFIQLDTKLSIFETGIKVVDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 146 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 205

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 206 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 324 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|6724285|gb|AAB51730.2| ATP synthase beta chain [Psilotum nudum]
          Length = 460

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D    I    P           F+TGI+V+D+  P
Sbjct: 71  ATLGRIFNVLGEPVD---NLGPINADKKSSIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 127

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 128 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 186

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  
Sbjct: 187 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 246

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 363

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 364 YKELQDIIAILG 375


>gi|18310619|ref|NP_562553.1| V-type ATP synthase subunit B [Clostridium perfringens str. 13]
 gi|110799637|ref|YP_696322.1| V-type ATP synthase subunit B [Clostridium perfringens ATCC 13124]
 gi|110801886|ref|YP_698924.1| V-type ATP synthase subunit B [Clostridium perfringens SM101]
 gi|168207147|ref|ZP_02633152.1| V-type ATPase, B subunit [Clostridium perfringens E str. JGS1987]
 gi|168209292|ref|ZP_02634917.1| V-type ATPase, B subunit [Clostridium perfringens B str. ATCC 3626]
 gi|168213606|ref|ZP_02639231.1| V-type ATPase, B subunit [Clostridium perfringens CPE str. F4969]
 gi|168216922|ref|ZP_02642547.1| V-type ATPase, B subunit [Clostridium perfringens NCTC 8239]
 gi|169342879|ref|ZP_02863910.1| V-type ATPase, B subunit [Clostridium perfringens C str. JGS1495]
 gi|81767023|sp|Q8XJW6|VATB_CLOPE RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|122956653|sp|Q0SSI3|VATB_CLOPS RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|122958833|sp|Q0TPW8|VATB_CLOP1 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|18145300|dbj|BAB81343.1| V-type sodium ATP synthase subunit B [Clostridium perfringens str.
           13]
 gi|110674284|gb|ABG83271.1| V-type ATPase, B subunit [Clostridium perfringens ATCC 13124]
 gi|110682387|gb|ABG85757.1| V-type ATPase, B subunit [Clostridium perfringens SM101]
 gi|169299136|gb|EDS81208.1| V-type ATPase, B subunit [Clostridium perfringens C str. JGS1495]
 gi|170661480|gb|EDT14163.1| V-type ATPase, B subunit [Clostridium perfringens E str. JGS1987]
 gi|170712527|gb|EDT24709.1| V-type ATPase, B subunit [Clostridium perfringens B str. ATCC 3626]
 gi|170714960|gb|EDT27142.1| V-type ATPase, B subunit [Clostridium perfringens CPE str. F4969]
 gi|182380961|gb|EDT78440.1| V-type ATPase, B subunit [Clostridium perfringens NCTC 8239]
          Length = 460

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 161/318 (50%), Gaps = 17/318 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ +N D  +V +     G  +    + F      I  S    GRV + +G+P D   
Sbjct: 42  GKVLEVNGDKAMVQLFEGSAGINLKNTKVRFLGRPLEIGVSEDMLGRVFDGMGRPKDNGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           ++    + D++ E ++ V     R    +  +TGI  ID    L  GQ++ VF+GSG+  
Sbjct: 102 NIIPEKRLDINGEAINPVA----RNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             L +  AR      SD    V+ + +G    E   F++++     + +SV+ +  + + 
Sbjct: 158 KELAAQIARQAKVLNSDSKFAVVFAAIGITFEEAEFFVDEFTKTGAIDRSVLFMNLASDP 217

Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            I R   P  A+T AEY +  KG +VL+I+  IT +  ++RE++    E+P  RGYP  +
Sbjct: 218 AIERIATPRMALTTAEYLAYEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  L ER G    ++G+IT +  + +  D+   PI D    I +G I+L+R L ++G
Sbjct: 278 YTDLSTLYERAGRLVGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337

Query: 347 RYPPVDPLASVSRLADKA 364
             PP+D L S+SRL DK 
Sbjct: 338 IMPPIDVLPSLSRLKDKG 355


>gi|312210461|emb|CBX90548.1| similar to mitochondrial ATP synthase beta subunit [Leptosphaeria
           maculans]
          Length = 519

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 152/308 (49%), Gaps = 24/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158
           GR++N  G PID      +G +     + +   PPA   Q    +   TGI+V+D+  P 
Sbjct: 132 GRIMNVTGDPIDE-----RGPIKATKYAPIHADPPAFTEQATSAEVLVTGIKVVDLLAPY 186

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211
             G +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +      
Sbjct: 187 ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYHEMQETSV 245

Query: 212 ---DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
              D   K  +V    +E P  R    LT +T+ EYF    G +VLL +D+I RF  +  
Sbjct: 246 IQLDGESKVALVFGQMNEPPGARARVALTGLTLCEYFRDVDGQDVLLFIDNIFRFTQAGS 305

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +
Sbjct: 306 EVSALLGRIPSAVGYQPTLAIDMGLMQERI--TTTSKGSITSVQAVYVPADDLTDPAPAT 363

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  
Sbjct: 364 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVIGDDHYNTATKVQQILQEYKSL 423

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 424 QDIIAILG 431


>gi|113910846|gb|ABI48155.1| ATPase beta subunit [Atrichum angustatum]
          Length = 472

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S       P PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|108773137|ref|YP_635646.1| ATP synthase CF1 beta subunit [Solanum tuberosum]
 gi|118573751|sp|Q2VEH0|ATPB_SOLTU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|82754634|gb|ABB90048.1| ATP synthase CF1 beta chain [Solanum tuberosum]
 gi|88656811|gb|ABD47064.1| ATP synthase CF1 beta subunit [Solanum tuberosum]
          Length = 498

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           +V QG+  D++GQ I +  ++        V    +   + ++ G  V   G   R+    
Sbjct: 47  LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATDGLTRGMAVIDTGAPIRVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|227786|prf||1711264A CF1 ATPase:SUBUNIT=beta
          Length = 498

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|113910782|gb|ABI48123.1| ATPase beta subunit [Bazzania trilobata]
          Length = 472

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 140 YRRGGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  
Sbjct: 199 VIDEQNISESKVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAISG 387


>gi|94502498|ref|YP_588124.1| ATP synthase CF1 beta subunit [Helianthus annuus]
 gi|118573542|sp|Q1KXV2|ATPB_HELAN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|88656902|gb|ABD47153.1| ATP synthase CF1 beta subunit [Helianthus annuus]
          Length = 498

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G D++       +       GR
Sbjct: 50  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|55957071|emb|CAB64751.2| ATP synthase beta subunit [Zabelia triflora]
          Length = 403

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 152/306 (49%), Gaps = 22/306 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTXTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + BVLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQBVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDEHYETAQRVKQTLQR 397

Query: 383 FEETRD 388
           ++E +D
Sbjct: 398 YKELQD 403


>gi|167038637|ref|YP_001666215.1| V-type ATP synthase subunit B [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320117029|ref|YP_004187188.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|238687684|sp|B0K8E7|VATB_THEP3 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|166857471|gb|ABY95879.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319930120|gb|ADV80805.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 459

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 26/365 (7%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +  G      GQV+ +N D  +V +     G  I+   + F      +  S    GRV +
Sbjct: 32  IETGTGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFD 91

Query: 108 ALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
            LG+P D      KG +      ++I         R    +  +TGI  ID    L  GQ
Sbjct: 92  GLGRPRD------KGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQ 145

Query: 163 RIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           ++ +F+GSG+  + L +  AR      SD    V+ + +G    E   FI D+     + 
Sbjct: 146 KLPIFSGSGLPHAQLAAQIARQAKVLGSDSKFAVVFAAMGITFEEADYFISDFRRTGAID 205

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
           +SV+ +  +++  I R   P  A+T AE+ + + + +VL+I+  +T +  ++RE++    
Sbjct: 206 RSVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARK 265

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  RGYP  ++++L  + ER G  +  KG+IT +  + +  D+   PI D    I +G
Sbjct: 266 EVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHPIPDLTGYITEG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI 389
            I+L+R L  +G YPP+D L S+SRL DK         D   L++ L     R ++ +++
Sbjct: 326 QIILSRDLYRKGIYPPIDVLPSLSRLKDKGIGQGKTREDHADLMNQLFASYARGKQAKEL 385

Query: 390 RLIGG 394
            +I G
Sbjct: 386 AVILG 390


>gi|300814096|ref|ZP_07094379.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300511753|gb|EFK38970.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 462

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 21/374 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSD--NLGQVIRI--NLDIVYICPVGIGEEISLGDLVFHWG 91
           VT L Q V  G+ V  + K +D   +G+V++I  N  +V +    +G   +   L F   
Sbjct: 18  VTNLHQ-VSYGEVVKIKSKTTDETQVGEVVKIDDNRALVQVYGTNMGVSGNNTGLEFTGV 76

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
            F +  S    GRV N + KPID    +  G         + P + R+      +TGI  
Sbjct: 77  PFEVPLSKEILGRVFNGIAKPIDRGGDIYSGKFYNVSGRPINP-VAREYPRNFIQTGISS 135

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DK-----VIISLVGERGREVRE 204
           ID    L  GQ++ +F+GSG+  + L +   R      DK     ++ + +G +  E   
Sbjct: 136 IDGLMTLIRGQKLPIFSGSGLDHNQLAAQIVRQAKISGDKNENFAIVFAAIGVKHDEADF 195

Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRF 262
           F E +    + + VV+     + PI+ ++  P  A+T AEY +  +  +VL+I+  IT +
Sbjct: 196 FREAFKNAGVNERVVMYINYADDPIMERLITPKCALTAAEYLAYEENTHVLVIMTDITSY 255

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A ++RE+++   E+P  +GYP  ++S+L  L ER G  +   G++T +  + +  D+   
Sbjct: 256 AEALREVSSGREEVPSRKGYPGHLYSDLAALYERAGMIKGIDGSVTLIPILTMPSDDITH 315

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTH 378
           PIAD    I +G IVL+R L     YPP++ L S+SRL      + ++ ++   +S+   
Sbjct: 316 PIADLTGYITEGQIVLSRDLQGSDIYPPINILPSLSRLMKDGIGEGYTREDHADLSA--Q 373

Query: 379 LIHRFEETRDIRLI 392
           L   +   +D+R +
Sbjct: 374 LFSSYSRVQDVRAL 387


>gi|169837580|ref|ZP_02870768.1| V-type ATP synthase subunit B [candidate division TM7 single-cell
           isolate TM7a]
          Length = 444

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 164/333 (49%), Gaps = 11/333 (3%)

Query: 42  YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGR-FRISPSA 99
           + CL    +   K     G+V+ +N D   +        I+L D  V   GR   +  S 
Sbjct: 4   FACLRLVEIETQKGELRRGRVLEVNGDKAVVQLFENSAGINLKDSKVRFLGRPLSLGVSE 63

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV + LG+P D    +   + +++I       + R    +  +TG+  ID    L 
Sbjct: 64  DMIGRVFDGLGRPKDNGPKIIP-EKTLDINGTAINPVARDYPSEFIQTGVSAIDGLNTLV 122

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN 213
            GQ++ +F+GSG+  + L    AR      +D    V+   +G    E + F ED++   
Sbjct: 123 RGQKLPIFSGSGLPHAELALQIARQAKVLGTDSKFAVVFGAIGITFEEAQTFTEDFIKTG 182

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271
            + ++V+ +  +++  I R   P  A+T AEY +  KG +VL+IL  +T +  ++RE++ 
Sbjct: 183 AIDRAVLFMNLANDPAIERLSTPKMALTCAEYLAFEKGMHVLVILTDLTNYCEALREVSA 242

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              E+P  RGYP  ++++L  + ER G  +  +G+IT +  + +  D+   PI D    I
Sbjct: 243 ARKEVPGRRGYPGYLYTDLSTIYERAGRIKGREGSITQIPILTMPEDDKTHPIPDLTGYI 302

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            +G I+L+R L ++   PP+D L S+SRL DK 
Sbjct: 303 TEGQIILSRDLYKQNLMPPIDVLPSLSRLKDKG 335


>gi|62902845|gb|AAY19337.1| ATP synthase beta subunit [Tripterococcus brunonis]
          Length = 488

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKFSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 213 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIIAILG 400


>gi|319441099|ref|ZP_07990255.1| F0F1 ATP synthase subunit beta [Corynebacterium variabile DSM
           44702]
          Length = 476

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 157/298 (52%), Gaps = 9/298 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G V NALG  +D +  LG+      I    P     +   +  +TGI+VID+ TP   G 
Sbjct: 98  GHVFNALGDCLD-EPGLGRDGEQWGIHRDAPAFDQLEGRTELMETGIKVIDLLTPYVKGG 156

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKSV 218
           +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  +  +E      L+ + 
Sbjct: 157 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLRLEMEEMGVLQDTA 216

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P +R    L+ +T+AEYF   +  +VLL +D+I RF  +  E++T  G +P
Sbjct: 217 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 276

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  ++    +IT++ +V V  D++ DP   +  + LD    
Sbjct: 277 SAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 334

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394
           L+R++A +G YP V+PL S SR+ +     +    V+  +  ++ + +E +DI  I G
Sbjct: 335 LDRAIASKGIYPAVNPLTSTSRILEPGIVGERHYAVAQRVIGILQKNKELQDIIAILG 392


>gi|228016323|gb|ACP51157.1| ATP synthase CF1 beta subunit [Pinus taeda]
          Length = 492

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 163/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDAGITSAIHRPAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|113910818|gb|ABI48141.1| ATPase beta subunit [Leucolejeunea clypeata]
          Length = 468

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 157/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D   S+ +   +  I    P           F+TGI+V+D+  P  
Sbjct: 81  ATLGRIFNVLGEPVDNLGSV-EASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 139

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +           
Sbjct: 140 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 198

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            E+ + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 199 NEESISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 373

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 374 YKELQDIIAILG 385


>gi|56675900|emb|CAB90089.2| ATP synthase beta subunit [Hymenanthera alpina]
          Length = 486

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFVQLETKLLIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|184200630|ref|YP_001854837.1| F0F1 ATP synthase subunit beta [Kocuria rhizophila DC2201]
 gi|183580860|dbj|BAG29331.1| ATP synthase beta chain [Kocuria rhizophila DC2201]
          Length = 488

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 155/302 (51%), Gaps = 16/302 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           G + N LG  +D    L   +L ++    I  K P     +   +  +TGI+ ID+ TP 
Sbjct: 105 GHIFNVLGDALD----LPTDELDIQERWPIHRKAPSFAELEGSTEMMETGIKSIDLLTPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNL 214
             G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE  + ++E      L
Sbjct: 161 IKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVL 220

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
           K + +V    DE P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++T  
Sbjct: 221 KDTALVFGQMDEPPGTRLRVALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLL 280

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D++ DP   +  + LD
Sbjct: 281 GRIPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLD 338

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLI 392
               L+R +A  G YP +DPL+S SR+ D  +       V++ +  ++   +E +DI  I
Sbjct: 339 ATTELSREIASRGLYPAIDPLSSTSRILDPQYVGQTHYDVATRVKSILQENKELQDIIAI 398

Query: 393 GG 394
            G
Sbjct: 399 LG 400


>gi|113910812|gb|ABI48138.1| ATPase beta subunit [Frullania dilatata]
          Length = 463

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 74  ATLGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 130

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 131 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 189

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 190 VINEENISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 247

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 248 VQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 305

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 306 PAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTL 364

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 365 QRYKELQDIIAILG 378


>gi|58081504|gb|AAW65227.1| AtpB [Frullania eboracensis]
          Length = 389

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   SGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +           
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 117

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            E+ + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 118 NEENISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 175

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 176 AGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 233

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 234 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 292

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 293 YKELQDIIAILG 304


>gi|4063536|gb|AAC98326.1| ATP synthase beta subunit [Capparis spinosa]
          Length = 456

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDMGTPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 201 LPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|150035727|gb|ABR67209.1| ATP synthase beta subunit [Pseudosasa japonica]
          Length = 482

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPID---NLGPVDINATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N ++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 206 VINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|114571341|ref|YP_758021.1| F0F1 ATP synthase subunit beta [Maricaulis maris MCS10]
 gi|122315071|sp|Q0AKW0|ATPB_MARMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114341803|gb|ABI67083.1| ATP synthase F1 subcomplex beta subunit [Maricaulis maris MCS10]
          Length = 479

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 29/314 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158
           GR+++  G+PID       GD+   + + +    P+ + Q  E +   TGI+V+D+  P 
Sbjct: 87  GRIMSVTGQPIDE-----AGDVPHTMKAPIHRPAPSFDEQATEAEVLPTGIKVVDLLCPY 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVR----EFIEDYLG 211
             G +IG+F G+G+GK+ L+       +  F    + + VGER RE      E IE  + 
Sbjct: 142 AKGGKIGLFGGAGVGKTVLIQELINNIAKLFGGYSVFAGVGERTREGNDLYWEMIESGVN 201

Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
            + K         +  +V    +E P  R    L+ +  AEYF   +G +VL  +D+I R
Sbjct: 202 KDPKEHDGSTEGSRCALVFGQMNEPPGARARVALSGLAQAEYFRDEEGKDVLFFVDNIFR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  
Sbjct: 262 FTQAGSELSALLGRIPSAVGYQPTLATDMGALQERI--TSTTKGSITSVQAVYVPADDMT 319

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VLNR+++E+G YP VDPL S SR+ +     +E       +  ++
Sbjct: 320 DPAPATTFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILEPRIVGEEHYGTARRVQEIL 379

Query: 381 HRFEETRDIRLIGG 394
            R++  +DI  I G
Sbjct: 380 QRYKALQDIIAILG 393


>gi|61196966|gb|AAX39468.1| ATP synthase beta subunit [Nitellopsis obtusa]
          Length = 402

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|113910762|gb|ABI48113.1| ATPase beta subunit [Lunularia cruciata]
          Length = 470

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 81  ATLGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 197

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 198 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 257

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 258 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 315

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 316 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|7708658|emb|CAB89995.1| ATP synthase beta subunit [Stackhousia minima]
          Length = 486

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELETKFSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|16416758|gb|AAL18402.1|AF313556_1 ATP synthase beta chain [Polytrichastrum pallidisetum]
          Length = 394

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 5   ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 61

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 62  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 121

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 122 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 181

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 182 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 239

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 240 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 298

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 299 KELQDIIAILG 309


>gi|61098498|gb|AAX37448.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098500|gb|AAX37449.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098502|gb|AAX37450.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098504|gb|AAX37451.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098506|gb|AAX37452.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098508|gb|AAX37453.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098510|gb|AAX37454.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098512|gb|AAX37455.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098514|gb|AAX37456.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098516|gb|AAX37457.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098518|gb|AAX37458.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098520|gb|AAX37459.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098522|gb|AAX37460.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098524|gb|AAX37461.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098526|gb|AAX37462.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098528|gb|AAX37463.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098530|gb|AAX37464.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098532|gb|AAX37465.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098534|gb|AAX37466.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098536|gb|AAX37467.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098538|gb|AAX37468.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098540|gb|AAX37469.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098542|gb|AAX37470.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098544|gb|AAX37471.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098546|gb|AAX37472.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098548|gb|AAX37473.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098550|gb|AAX37474.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098552|gb|AAX37475.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098554|gb|AAX37476.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098556|gb|AAX37477.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098558|gb|AAX37478.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098560|gb|AAX37479.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098562|gb|AAX37480.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098564|gb|AAX37481.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098566|gb|AAX37482.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098568|gb|AAX37483.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098570|gb|AAX37484.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098572|gb|AAX37485.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098574|gb|AAX37486.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098576|gb|AAX37487.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098578|gb|AAX37488.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098580|gb|AAX37489.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098582|gb|AAX37490.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098584|gb|AAX37491.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098586|gb|AAX37492.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098588|gb|AAX37493.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica]
 gi|61098590|gb|AAX37494.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica]
 gi|61098592|gb|AAX37495.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica]
 gi|61098594|gb|AAX37496.1| ATP synthase beta subunit [Phlomis purpurea]
          Length = 486

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|56675902|emb|CAB89967.2| ATP synthase beta subunit [Fallopia sachalinensis]
          Length = 488

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 212 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R+LA +G YP VDPL S S +       +E  K+   +   + R+
Sbjct: 330 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|21633401|gb|AAM52175.1| ATP synthase beta subunit [Calycobolus glaber]
          Length = 490

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTXXIHISAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P  HG +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRHGGKIGLFGGAGLGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|224539735|ref|ZP_03680274.1| hypothetical protein BACCELL_04644 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518658|gb|EEF87763.1| hypothetical protein BACCELL_04644 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 506

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 161/327 (49%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L +   +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDRAG-AYPIHRDPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     ++    +E P  R+   L+ +T+AE F  +G
Sbjct: 210 GEEFKKSMEEGNWDLSKVDYSEVEKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDQG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   
Sbjct: 270 AETGGSRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
               +E  ++   +  ++ R +E +DI
Sbjct: 388 HVVGEEHYEVAQRVKQILQRNKELQDI 414


>gi|195183524|dbj|BAG66975.1| ATP synthase beta subunit [Melicytus novae-zelandiae]
 gi|195468867|dbj|BAG66973.1| ATP synthase beta subunit [Melicytus latifolius]
          Length = 489

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFVQLETKLLIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|552857|gb|AAA84588.1| atpB gene product [Oryza sativa]
          Length = 498

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVIKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6689410|emb|CAB65478.1| ATP synthase beta subunit [Tagetes sp. Nickrent 3061]
          Length = 498

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|325269432|ref|ZP_08136049.1| ATP synthase F1 sector beta subunit [Prevotella multiformis DSM
           16608]
 gi|324988353|gb|EGC20319.1| ATP synthase F1 sector beta subunit [Prevotella multiformis DSM
           16608]
          Length = 507

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG + L K + +  I  + P        ++  +TGI+VID+  P   G 
Sbjct: 95  GRMMNVIGQPIDGMEPL-KMEGAYPIHREAPKFEELSTHKEMLQTGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L       G+
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             +K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFRKAMEEGKWDLSLVDQEELQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273

Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  ++G
Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              E       +  L+  + E +DI  I G
Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421


>gi|303235040|ref|ZP_07321664.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           BVS033A4]
 gi|302493895|gb|EFL53677.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           BVS033A4]
          Length = 462

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ DI  +      + I+L +    + GR   +  S    GRV + LG+PID   
Sbjct: 42  GRVVEIDHDIAMVQVFEGTKGINLQETTVRFLGRPLELGVSEDMIGRVFDGLGRPIDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I       ++R    +  +TG+  ID    L  GQ++ +F+GSG+  + L
Sbjct: 102 KIIPED-KVDINGSSINPVSRDYPSEFIETGVSTIDGLNTLVRGQKLPIFSGSGLPHNKL 160

Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR        D F  V+ + +G    E + FI D+     + ++V+ +  +D+  I
Sbjct: 161 AAQIARQAKVLGKDDKF-AVVFAAMGITFEEAQYFIGDFNKTGAIDRAVLFMNLADDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AE+ +  KG +VL+I+  +T +A ++RE++    E+P  RGYP  +++
Sbjct: 220 ERLSTPKMALTCAEFLAFEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G     +G+IT +  + +  D+   PI D    I +G I+L+R L ++G  
Sbjct: 280 DLATLYERAGKIVGREGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKKGYE 339

Query: 349 PPVDPLASVSRLADKA 364
           PP++ + S+SRL DK 
Sbjct: 340 PPINAIPSLSRLKDKG 355


>gi|291542393|emb|CBL15503.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus bromii
           L2-63]
          Length = 457

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 157/306 (51%), Gaps = 17/306 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S     RV + LG PIDG  +L    + D++   M+   PA  R   ++  +TGI  ID 
Sbjct: 82  SPDMLSRVFDGLGNPIDGGPALIPEKRLDINGTPMN---PAA-RNYPQEFIQTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIED 208
              L  GQ++ +F+ SG+  + L +  AR       D    V+ + +G    E   F++ 
Sbjct: 138 LNTLVRGQKLPIFSASGLPHAQLAAQIARQAAVRGKDEQFAVVFAAMGITFEESDYFVQS 197

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +     + ++V+ V  +++  I R   P  A+T AEY +  +G +VL+I+  IT +A ++
Sbjct: 198 FKETGAIDRTVMFVNLANDPAIERIATPKMALTAAEYLAFDRGMHVLVIMTDITNYADAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  L ER G  + ++G+IT +  + +  D+   PI D
Sbjct: 258 REVSAARKEVPGRRGYPGYMYTDLATLYERAGRLKGKEGSITLIPILTMPEDDKTHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD--EKKLVSSLTHLIHRFE 384
               I +G I+L+R L  +G  PP+D L S+SRL DK    D   K   +++  L   + 
Sbjct: 318 LTGYITEGQIILSRELYRKGITPPIDVLPSLSRLKDKGIGPDRTRKDHAATMNQLFAAYA 377

Query: 385 ETRDIR 390
             +D R
Sbjct: 378 RGKDAR 383


>gi|327313276|ref|YP_004328713.1| ATP synthase F1 subunit beta [Prevotella denticola F0289]
 gi|326945149|gb|AEA21034.1| ATP synthase F1, beta subunit [Prevotella denticola F0289]
          Length = 507

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG + L K + +  I  + P        ++  +TGI+VID+  P   G 
Sbjct: 95  GRMMNVIGQPIDGMEPL-KMEGAYPIHREAPKFEELSTHKEMLQTGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L       G+
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             +K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFRKAMEEGKWDLSLVDQEEIQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273

Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  ++G
Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              E       +  L+  + E +DI  I G
Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421


>gi|323149174|ref|YP_004222003.1| ATP synthase CF1 beta subunit [Coccomyxa sp. C-169]
 gi|317467230|gb|ADV29851.1| ATP synthase CF1 beta subunit [Coccomyxa sp. C-169]
          Length = 483

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D    + I    P  ++       F+TGI+V+D+  P   
Sbjct: 98  GRIFNVLGEPVD---NLGPVDSKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 154

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +        
Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESKVID 213

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DNL  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 EDNLSASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R++E
Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKETLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|150035717|gb|ABR67204.1| ATP synthase beta subunit [Aristida adscensionis]
          Length = 432

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GTTLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 156 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 333

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 334 KELQDIIAILG 344


>gi|57868948|gb|AAW57470.1| ATP synthase beta subunit [Empetrum hermaphroditum]
          Length = 493

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 100 GVTLGRIFNVLGEPVD---NLGPLDTHTTSPIHRSAPAFIELETKLLIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKET 215

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 216 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 275

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 276 QAGSEVSALLGRIPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 333

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  K+   +   + R
Sbjct: 334 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQRVKQTLQR 393

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 394 YKELQDIIAILG 405


>gi|324990017|gb|EGC21958.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK353]
          Length = 464

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|184127879|gb|ACC67839.1| ATP synthase beta chain [Psilotum nudum]
          Length = 403

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D    I    P           F+TGI+V+D+  P
Sbjct: 14  ATLGRIFNVLGEPVD---NLGPINADKKSSIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 70

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 71  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 129

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  
Sbjct: 130 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 189

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 190 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 247

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 248 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 306

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 307 YKELQDIIAILG 318


>gi|118614499|ref|YP_899414.1| ATP synthase CF1 beta subunit [Sorghum bicolor]
 gi|125987720|sp|A1E9T1|ATPB_SORBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|118201133|gb|ABK79503.1| ATP synthase CF1 beta subunit [Sorghum bicolor]
          Length = 498

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|61968285|gb|AAX57069.1| ATP synthase beta subunit [Phyllanthus calycinus]
          Length = 479

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEDNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|150035725|gb|ABR67208.1| ATP synthase beta subunit [Brachyelytrum aristosum]
          Length = 457

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 204 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|48478778|ref|YP_024386.1| ATP synthase CF1 beta subunit [Saccharum hybrid cultivar
           SP-80-3280]
 gi|50812535|ref|YP_054638.1| ATP synthase CF1 beta subunit [Saccharum officinarum]
 gi|75323362|sp|Q6ENV6|ATPB_SACOF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75324213|sp|Q6L392|ATPB_SACHY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|48478680|gb|AAT44700.1| ATP synthase CF1 beta chain [Saccharum hybrid cultivar SP80-3280]
 gi|49659519|dbj|BAD27300.1| ATP synthase beta subunit [Saccharum hybrid cultivar NCo 310]
          Length = 498

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|110915626|gb|ABH02601.1| ATP synthase beta subunit [Dichelachne micrantha]
          Length = 490

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085198|gb|AAX63003.1| ATP synthase beta subunit [Tetracoccus dioicus]
          Length = 482

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +      + F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIELDTKLEIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L      +D  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVGSDHYETARKVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|332365327|gb|EGJ43090.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1059]
          Length = 464

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|325854995|ref|ZP_08171711.1| ATP synthase F1, beta subunit [Prevotella denticola CRIS 18C-A]
 gi|325483973|gb|EGC86913.1| ATP synthase F1, beta subunit [Prevotella denticola CRIS 18C-A]
          Length = 507

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG + L K + +  I  + P        ++  +TGI+VID+  P   G 
Sbjct: 95  GRMMNVIGQPIDGMEPL-KMEGAYPIHREAPKFEELSTHKEMLQTGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L       G+
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             +K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFRKAMEEGKWDLSLVDQEEIQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273

Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  ++G
Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              E       +  L+  + E +DI  I G
Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421


>gi|323350925|ref|ZP_08086583.1| V-type ATP synthase, subunit B [Streptococcus sanguinis VMC66]
 gi|322122907|gb|EFX94613.1| V-type ATP synthase, subunit B [Streptococcus sanguinis VMC66]
 gi|332363688|gb|EGJ41468.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK49]
          Length = 464

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|89242526|gb|ABD64621.1| ATPase beta subunit [Cananga odorata]
          Length = 436

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    G +VLL +D+I RF  
Sbjct: 174 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|59857506|dbj|BAD89754.1| ATP synthase beta subunit [Nitella oligospira]
 gi|59857508|dbj|BAD89755.1| ATP synthase beta subunit [Nitella oligospira]
          Length = 340

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|7524659|ref|NP_042413.1| ATP synthase CF1 beta subunit [Pinus thunbergii]
 gi|1168580|sp|P41622|ATPB_PINTH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1262653|dbj|BAA04370.1| H+-ATPase beta subunit [Pinus thunbergii]
 gi|228016394|gb|ACP51227.1| ATP synthase CF1 beta subunit [Pinus thunbergii]
          Length = 492

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P           F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  +
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 397 KELQDIIAI----PGLD 409


>gi|11467199|ref|NP_043032.1| ATP synthase CF1 beta subunit [Zea mays]
 gi|114551|sp|P00827|ATPB_MAIZE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|552732|gb|AAA85356.1| coupling factor beta-subunit [Zea mays]
 gi|902229|emb|CAA60293.1| ATPase beta subunit [Zea mays]
          Length = 498

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|296532596|ref|ZP_06895301.1| ATP synthase F1 sector beta subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296267087|gb|EFH13007.1| ATP synthase F1 sector beta subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 480

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 157/310 (50%), Gaps = 21/310 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I  + P   ++    +   TGI+V+D+  P   G
Sbjct: 90  LGRILNVIGEPIDERGPVPHAK-TYTIHREAPAFEDQATAAEILVTGIKVVDLLAPYLKG 148

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210
            +IG+F G+G+GK+     L++  A+      V    VGER RE  +   +        L
Sbjct: 149 GKIGLFGGAGVGKTVTIQELINNIAKGHGGVSVFAG-VGERTREGNDLYHEMVDAGVIKL 207

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265
           G+N      K  +V    +E P  R    L+ +++AEYF   +G +VL  +D+I RF  +
Sbjct: 208 GENGSTEGSKVALVYGQMNEPPGARARVALSGLSMAEYFRDEQGQDVLFFIDNIFRFTQA 267

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 268 GAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+RS+AE+  +P VDPL S SR  D     +E  K    +  ++  ++
Sbjct: 326 ATSFAHLDATTVLSRSIAEQAIFPAVDPLDSTSRALDPRIIGEEHYKTAREVQRILQTYK 385

Query: 385 ETRDIRLIGG 394
             +DI  I G
Sbjct: 386 SLQDIIAILG 395


>gi|328944760|gb|EGG38921.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1087]
          Length = 464

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|113910920|gb|ABI48192.1| ATPase beta subunit [Helminthostachys zeylanica]
          Length = 468

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D    LG  D S    + K  PA  R   +   F+TGI+V+D+  P   
Sbjct: 82  GRIFNVLGEPVD---DLGPVDASETSPIHKPAPAFTRLDTKLSIFETGIKVVDLLAPYRR 138

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +  
Sbjct: 139 GGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 197

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 198 EQNISESKVALVYGQMNESPGARTRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             +  D   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E 
Sbjct: 316 TFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKEL 375

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 376 QDIIAILG 383


>gi|7708177|emb|CAB90029.1| ATP synthase beta subunit [Brexia madagascariensis]
          Length = 478

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|108796670|ref|YP_636546.1| CF1 beta subunit of ATP synthase [Zygnema circumcarinatum]
 gi|118573783|sp|Q32RI0|ATPB_ZYGCR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|61393654|gb|AAX45796.1| CF1 beta subunit of ATP synthase [Zygnema circumcarinatum]
          Length = 489

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+PID   +LG  D +  + + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPID---NLGPVDAATTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +       +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGTEHYDTAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|119350515|gb|ABL63208.1| AtpB [Myrmecia israelensis]
          Length = 393

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 158/307 (51%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   D    I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVDNKD-GFPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD-- 212
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQ 156

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 157 NISNSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 216

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 217 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 274

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   +HR++E +
Sbjct: 275 AHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKSTLHRYKELQ 333

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 334 DIIAILG 340


>gi|113910814|gb|ABI48139.1| ATPase beta subunit [Cololejeunea biddlecomiae]
          Length = 471

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 84  ATLGRIFNVLGEPVD---NLGPVEASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 141 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESK 199

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 200 VINEENIPDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 257

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 258 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 315

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 316 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTL 374

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 375 QRYKELQDIIAILG 388


>gi|4063552|gb|AAC98334.1| ATP synthase beta subunit [Muntingia calabura]
          Length = 456

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGSVDTRTTAPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|62902808|gb|AAY19319.1| ATP synthase beta subunit [Dicarpellum pancheri]
          Length = 488

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETQLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|11467760|ref|NP_050811.1| ATP synthase CF1 beta subunit [Nephroselmis olivacea]
 gi|17432924|sp|Q9TL34|ATPB_NEPOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5880689|gb|AAD54782.1|AF137379_5 CF1 beta subunit of ATP synthase [Nephroselmis olivacea]
          Length = 491

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +G  + ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 98  LGRIFNVLGEPVDNMGPVGN-EKTLPIHREAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 156

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +   
Sbjct: 157 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMCESKVINK 215

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 216 ADVKSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSE 275

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 276 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 333

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W    D       +   + R++E 
Sbjct: 334 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDDHYGTAQRVKQTLQRYKEL 392

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 393 QDIIAILG 400


>gi|327488659|gb|EGF20459.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1058]
          Length = 464

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|189465910|ref|ZP_03014695.1| hypothetical protein BACINT_02273 [Bacteroides intestinalis DSM
           17393]
 gi|189434174|gb|EDV03159.1| hypothetical protein BACINT_02273 [Bacteroides intestinalis DSM
           17393]
          Length = 506

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 161/327 (49%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L +   +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDRAG-AYPIHRDPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     ++    +E P  R+   L+ +T+AE F  +G
Sbjct: 210 GEEFKKSMEEGNWDLSKVDYNEVEKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDQG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   
Sbjct: 270 AETGGSRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
               +E  ++   +  ++ R +E +DI
Sbjct: 388 HVVGEEHYEVAQRVKQILQRNKELQDI 414


>gi|124486043|ref|YP_001030659.1| V-type ATP synthase subunit B [Methanocorpusculum labreanum Z]
 gi|167016629|sp|A2SST6|VATB_METLZ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|124363584|gb|ABN07392.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Methanocorpusculum labreanum Z]
          Length = 458

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 176/359 (49%), Gaps = 36/359 (10%)

Query: 60  GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+  + D+V +       G+G +  +    F    F++  S    GR+++  GKPIDG
Sbjct: 41  GQVLDTSEDLVVVQCFETTTGLGRDTGV---RFLGETFKMPVSKTMLGRILSGGGKPIDG 97

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   D  ++I         R       +TGI  ID    L  GQ++ +F+ +G+  +
Sbjct: 98  GPAIVP-DKRLDINGAAINPYARGTPRDFIQTGISTIDGTNTLVRGQKLPIFSSAGLPHN 156

Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
            +    AR       SD F  V+ + +G    E   F+ D+     L+++VV +  +D+ 
Sbjct: 157 EIALQIARQAKVPGSSDEF-AVVFAAMGITREEANYFMADFERTGALERAVVFLNLADDP 215

Query: 228 PILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            + R + P  A+T AEY + + G +VL+IL  +T +  ++R+I     E+P  RGYP  +
Sbjct: 216 AVERTVTPRLALTTAEYLAYELGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYM 275

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  + ER G  +  KG++T +  + + GD+   PI D    I +G IV++  L  +G
Sbjct: 276 YTDLASIYERAGIIKGLKGSVTQIPILTMPGDDITHPIPDLTGYITEGQIVISPELHRKG 335

Query: 347 RYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            YPP++ L S+SRL +    K  + ++ K VS + +               GY  GVDL
Sbjct: 336 IYPPINVLPSLSRLMNLGIGKGMTREDHKKVSDMMY--------------SGYAEGVDL 380


>gi|19033057|gb|AAL83513.1|AF408785_1 ATP synthase beta subunit [Nitellopsis obtusa]
          Length = 402

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|156530121|gb|ABU75157.1| AtpB [Castela retusa]
          Length = 496

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D +GQ+I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 48  KSRDTVGQLINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I  + P  +        F+TGI+V+D+  P   G 
Sbjct: 108 IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 224

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 225 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 284

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLXRYKELQDI 402

Query: 390 RLIGG 394
             I G
Sbjct: 403 IAILG 407


>gi|4995647|emb|CAB44210.1| H(+)-transporting ATP synthase [Malva canariensis]
          Length = 482

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 210

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 211 GVINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 268

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 269 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 326

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 327 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 386

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 387 QRYKELQDIIAILG 400


>gi|4063558|gb|AAC98337.1| ATP synthase beta subunit [Pelargonium cotyledonis]
          Length = 456

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 193

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 194 GVINEQKVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 253

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 311

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  ++   +   + R
Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDQHYEIAQRVKQTLQR 371

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 372 YKELQDIIAILG 383


>gi|147919747|ref|YP_686507.1| V-type ATP synthase subunit B [uncultured methanogenic archaeon
           RC-I]
 gi|121687897|sp|Q0W362|VATB_UNCMA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|110621903|emb|CAJ37181.1| A(1)A(0)-type ATP synthase, subunit B [uncultured methanogenic
           archaeon RC-I]
          Length = 458

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 183/361 (50%), Gaps = 23/361 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC 102
           + L D  V +G+  D+   V+ +    V+    GI  + S+    F     ++  S    
Sbjct: 31  IVLSDGTVKRGQVLDSSNDVVAVQ---VFEGTSGISRDSSVK---FLGETIKMPVSKDML 84

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  G+P+DG  ++   +  +EI+       +R++ +   +TGI  ID    L  GQ
Sbjct: 85  GRILSGSGEPLDGGPAIIP-EKRLEIVGAAINPYSRRQPKDFIQTGISTIDGMNTLVRGQ 143

Query: 163 RIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNL 214
           ++ +F+GSG+  + +    AR       ++ F  V+   +G    E + F++D+     L
Sbjct: 144 KLPIFSGSGLPHNEIALQIARQAKVVGSTEPF-AVVFCAMGITAEEAQTFMKDFERTGAL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273
           +++VV +  +D+  I R + P  A+T AEY + + D +VL+I   +T +  ++R+I    
Sbjct: 203 ERAVVFLNLADDPAIERIITPRLALTTAEYLAFEHDMHVLVIYTDMTNYCEALRQIGAAR 262

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L +L ER G  E +KG+IT V  + + GD+   PI D    I +
Sbjct: 263 EEVPGRRGYPGYMYTDLAQLYERAGIIEGKKGSITQVPILTMPGDDITHPIPDLTGYITE 322

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389
           G IV+ R L  +  YPP++   S+SRL      A    ++ K VS   +    + E +D+
Sbjct: 323 GQIVVARDLHRKNIYPPINVSPSLSRLMSLGIGAGKTREDHKAVSDQCY--SAYAEGKDL 380

Query: 390 R 390
           R
Sbjct: 381 R 381


>gi|327472216|gb|EGF17653.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK408]
          Length = 464

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|237688540|ref|YP_002905158.1| ATP synthase CF1 beta subunit [Pinus contorta]
 gi|226875368|gb|ACO89106.1| ATP synthase CF1 beta subunit [Pinus contorta]
          Length = 492

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P           F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  +
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 397 KELQDIIAI----PGLD 409


>gi|184127863|gb|ACC67831.1| ATP synthase beta chain [Marattia fraxinea]
          Length = 403

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 16  LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 72

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 73  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 132

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 133 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 192

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 193 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 250

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 251 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 309

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 310 LQDIIAILG 318


>gi|118561664|dbj|BAF37582.1| ATP synthase beta subunit [Nitella comptonii]
 gi|118561666|dbj|BAF37583.1| ATP synthase beta subunit [Nitella comptonii]
 gi|118561669|dbj|BAF37584.1| ATP synthase beta subunit [Nitella comptonii]
          Length = 340

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|61196968|gb|AAX39469.1| ATP synthase beta subunit [Nitella hyalina]
          Length = 402

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|323474900|gb|ADX85506.1| ATP synthase, B subunit [Sulfolobus islandicus REY15A]
          Length = 463

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 160/307 (52%), Gaps = 19/307 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+ N LG  +D    + KG+      S + PA  R+  E+  +TGI  ID    
Sbjct: 84  SEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAA-REYPEEFIQTGISAIDGLNA 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208
           L  GQ++ +F+GSG+  + L +  A+            V+ + +G R  +    R+F E+
Sbjct: 143 LLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFAAIGARYDDALFFRKFFEE 202

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
               N  +  ++V+ ++E  +++ + P TA+T+AEY + + D +VL IL  +T +  ++R
Sbjct: 203 TGAIN--RVAMIVSLANEPSVMKTLTPKTALTLAEYLAFEQDMHVLAILIDMTNYCEALR 260

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI+    E+P   GYP  ++++L  + ER G    +KG+IT +  + +  D+   PI D 
Sbjct: 261 EISAAREEVPGRGGYPGYMYTDLATIYERAGKVLGKKGSITQMPILTMPNDDITHPIPDL 320

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRF 383
              I +G IVL+R+L  +G YPP++ L S+SRLA     +  + D+ K VS+   L   +
Sbjct: 321 TGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSN--QLFASY 378

Query: 384 EETRDIR 390
               D R
Sbjct: 379 ARAVDTR 385


>gi|57868956|gb|AAW57474.1| ATP synthase beta subunit [Bruinsmia styracoides]
          Length = 492

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 214

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 215 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNAQNVLLFIDNIFRFV 274

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 275 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 332

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R
Sbjct: 333 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYETAQRVKQTLQR 392

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 393 YKELQDIIAILG 404


>gi|44885358|dbj|BAD11922.1| ATP synthase beta subunit [Nitella pseudoflabellata]
 gi|44885360|dbj|BAD11923.1| ATP synthase beta subunit [Nitella pseudoflabellata]
 gi|44885362|dbj|BAD11924.1| ATP synthase beta subunit [Nitella pseudoflabellata]
 gi|44885364|dbj|BAD11925.1| ATP synthase beta subunit [Nitella megaspora]
 gi|56342291|dbj|BAD74007.1| ATP synthase beta subunit [Nitella megaspora]
 gi|59857510|dbj|BAD89756.1| ATP synthase beta subunit [Nitella imperialis]
          Length = 340

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|192289475|ref|YP_001990080.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris TIE-1]
 gi|192283224|gb|ACE99604.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris TIE-1]
          Length = 517

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 7/320 (2%)

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GD V   G   R+       GR+++ LG+P+DG   +   D+   I +  P  ++R 
Sbjct: 86  IEAGDRVRGTGDVVRVPVGPALLGRIVDPLGRPLDGKGPVAT-DMLEPIDAPAPAIVDRD 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGE 197
            V +  +TG+ V+D    L  GQR  +     IGK+T+ +         D + + + VG+
Sbjct: 145 LVTQPVQTGLVVVDTLFALGRGQRELIIGDRAIGKTTIAIDTIVNQKTSDIICVYVAVGQ 204

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   VR  I+  +     ++ ++VVA S  SP L+ +AP  A ++AEYF  +G + L+++
Sbjct: 205 KTASVRRAIDAIMAFGAPERCIIVVAGSSSSPGLQWIAPFAAFSMAEYFRDRGQHALIVV 264

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVL 314
           D +++ A S REI+  + + P    YP  +F    RLLER     KEK  G++TA+    
Sbjct: 265 DDLSKHAASHREISLLTRQSPGREAYPGDIFYVHARLLERAAKLSKEKGGGSLTALPIAE 324

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            D  N +  I  ++ SI DG IVL+  L  EG+ P VD   SVSR+  K  +   ++   
Sbjct: 325 TDAGNLSAYIPTNLISITDGQIVLDARLFHEGQKPAVDVGTSVSRVGGKTQAQALREAAE 384

Query: 375 SLTHLIHRFEETRDIRLIGG 394
           ++     +F E       GG
Sbjct: 385 TVRLDYAQFLELETFTRFGG 404


>gi|157149878|ref|YP_001449458.1| V-type ATP synthase subunit B [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262281770|ref|ZP_06059539.1| V-type sodium ATP synthase [Streptococcus sp. 2_1_36FAA]
 gi|189030164|sp|A8AUJ8|VATB_STRGC RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|157074672|gb|ABV09355.1| v-type sodium ATP synthase, chain B [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|262262224|gb|EEY80921.1| V-type sodium ATP synthase [Streptococcus sp. 2_1_36FAA]
 gi|324992667|gb|EGC24588.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK405]
 gi|324995804|gb|EGC27715.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK678]
 gi|325686390|gb|EGD28420.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK72]
 gi|325689172|gb|EGD31179.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK115]
 gi|325697249|gb|EGD39135.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK160]
 gi|327460070|gb|EGF06409.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1]
 gi|327463436|gb|EGF09755.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1057]
 gi|327467960|gb|EGF13450.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK330]
 gi|332360179|gb|EGJ37993.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1056]
 gi|332364949|gb|EGJ42717.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK355]
          Length = 464

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+ + +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|228017024|gb|ACP51847.1| ATP synthase CF1 beta subunit [Pinus canariensis]
 gi|228017716|gb|ACP52528.1| ATP synthase CF1 beta subunit [Pinus pinaster]
          Length = 492

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P           F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  +
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 397 KELQDIIAI----PGLD 409


>gi|183217748|ref|YP_001837367.1| ATP synthase CF1 beta subunit [Guizotia abyssinica]
 gi|179366263|gb|ACB86534.1| ATP synthase CF1 beta subunit [Guizotia abyssinica]
          Length = 498

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G D+V       +       GR
Sbjct: 50  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVVDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|20467363|gb|AAL27812.1| ATPase beta subunit [Ephedra monosperma]
          Length = 449

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 73  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 129

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 130 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 189

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 190 EKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 249

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 250 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 307

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL++ LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 308 TFAHLDATTVLSKGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|110915608|gb|ABH02592.1| ATP synthase beta subunit [Calotheca brizoides]
 gi|110915612|gb|ABH02594.1| ATP synthase beta subunit [Briza subaristata]
 gi|110915632|gb|ABH02604.1| ATP synthase beta subunit [Echinopogon caespitosus]
 gi|110915650|gb|ABH02613.1| ATP synthase beta subunit [Gymnachne koelerioides]
          Length = 490

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|56675904|emb|CAB90001.2| ATP synthase beta subunit [Salacia pallescens]
          Length = 482

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|228016461|gb|ACP51293.1| ATP synthase CF1 beta subunit [Pinus torreyana subsp. insularis]
          Length = 492

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P           F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  +
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 397 KELQDIIAI----PGLD 409


>gi|58081510|gb|AAW65230.1| AtpB [Lunularia cruciata]
          Length = 382

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   SGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|66276291|gb|AAY44160.1| ATP synthase beta subunit [Schizopepon bryoniifolius]
          Length = 481

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y G     
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYTGMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|154484206|ref|ZP_02026654.1| hypothetical protein EUBVEN_01917 [Eubacterium ventriosum ATCC
           27560]
 gi|149734683|gb|EDM50600.1| hypothetical protein EUBVEN_01917 [Eubacterium ventriosum ATCC
           27560]
          Length = 458

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 16/311 (5%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG PIDG  D L +    +  ++  P A  R    +  +TGI  ID   
Sbjct: 82  SPDMLGRVFDGLGNPIDGGPDILPEERRDINGVAMNPAA--RNYPSEFIQTGISAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  A+      +D    V+ + VG    E   FI  + 
Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIAKQAKVIGTDEPFAVVFAAVGITFEESNFFINSFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               + ++V+ +  +++  + R   P  A+T AEY +  KG +VL+I+  IT +A ++RE
Sbjct: 200 ETGAIDRTVLFINLANDPAVERIATPRMALTAAEYLAFEKGMHVLVIITDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  + ER G    + G+IT +  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLATMYERAGRQRGKDGSITMIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383
             I +G I+L+R L  +G  PP+D L S+SRL DK        AD   +++ L     R 
Sbjct: 320 GYITEGQIILSRDLYRKGITPPIDVLPSLSRLKDKGIGEGKTRADHSNVMNQLFSAYARG 379

Query: 384 EETRDIRLIGG 394
           +E +++  I G
Sbjct: 380 KEAKELMTILG 390


>gi|62085099|gb|AAX62956.1| ATP synthase beta subunit [Austrobuxus megacarpus]
          Length = 482

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHGGVSVFGGVGERTREGNDLYKEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +        E  +   S+   + R+
Sbjct: 324 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQPTIVGKEHYETAQSVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|44885366|dbj|BAD11926.1| ATP synthase beta subunit [Nitella hyalina]
 gi|44885368|dbj|BAD11927.1| ATP synthase beta subunit [Nitella hyalina]
 gi|44885370|dbj|BAD11928.1| ATP synthase beta subunit [Nitella gracillima]
 gi|56342293|dbj|BAD74008.1| ATP synthase beta subunit [Nitella gracillima]
 gi|59857512|dbj|BAD89757.1| ATP synthase beta subunit [Nitella vieillardii]
 gi|59857514|dbj|BAD89758.1| ATP synthase beta subunit [Nitella vieillardii]
 gi|59857516|dbj|BAD89759.1| ATP synthase beta subunit [Nitella hyalina]
 gi|59857518|dbj|BAD89760.1| ATP synthase beta subunit [Nitella morongii]
          Length = 340

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|56751796|ref|YP_172497.1| F0F1 ATP synthase subunit beta [Synechococcus elongatus PCC 6301]
 gi|81301124|ref|YP_401332.1| F0F1 ATP synthase subunit beta [Synechococcus elongatus PCC 7942]
 gi|114569|sp|P07890|ATPB_SYNP6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573769|sp|Q31KS4|ATPB_SYNE7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|48024|emb|CAA29362.1| unnamed protein product [Synechococcus elongatus PCC 6301]
 gi|56686755|dbj|BAD79977.1| ATP synthase beta subunit [Synechococcus elongatus PCC 6301]
 gi|81170005|gb|ABB58345.1| ATP synthase F1, beta subunit [Synechococcus elongatus PCC 7942]
          Length = 484

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     S  I    P   + +   K F+TGI+VID+  P  
Sbjct: 95  ATLGRIFNVLGEPVDELGPVNAATTS-PIHRDAPKLTDLETKPKVFETGIKVIDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ L+     +   +     +   VGER RE     +EF E  + D
Sbjct: 154 QGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYQEFKESGVID 213

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+  S V  V    +E P  R    L+A+T+AE+F      +VLL +D+I RF  +  
Sbjct: 214 EKNIANSKVALVYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++ +L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +   +   +E  +   ++   + R++E 
Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYRTARAVQSTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|326790468|ref|YP_004308289.1| H+transporting two-sector ATPase alpha/subunit beta central region
           [Clostridium lentocellum DSM 5427]
 gi|326541232|gb|ADZ83091.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium lentocellum DSM 5427]
          Length = 461

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 164/329 (49%), Gaps = 30/329 (9%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+VI++    V +        IS G+  + F     ++  S    GR  N +G+PIDG  
Sbjct: 42  GKVIKVEGKTVVVQVFEGTAGISTGNASVKFTGEPLKLPLSKEILGRSFNGIGEPIDG-- 99

Query: 118 SLGKGDLSMEIMSKVPPAMN-------RQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFAG 169
                  + +I+SK    +N        +R  + F +TG+  ID    L  GQ++ +F+G
Sbjct: 100 -------AYQIISKDKYNVNGRPINPVARRYPRNFIQTGVSAIDALMTLIRGQKLPIFSG 152

Query: 170 SGIGKSTLLSMF--------ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
           +GI  + L            A +D F  V+   +G R  +   F   +    +   VV+ 
Sbjct: 153 NGIAHNELAVQIVKQAKIEGANADNF-AVVFGAMGVRHDDASYFTRSFEAAGVLDHVVMY 211

Query: 222 ATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
               + PI  +++ P  A+T AEY + + D +VL++L  +T ++ ++RE+++  GE+P  
Sbjct: 212 LNLADDPITERISTPRCALTAAEYLAFEQDMHVLVVLTDMTSYSEALREMSSTRGEVPSR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP  ++S+L  + ER G  E ++G+IT +  + +  D+   PI D    I +G IVLN
Sbjct: 272 KGYPGYLYSDLSTIYERAGMLEGKQGSITLIPILTMPNDDITHPIPDLTGFITEGQIVLN 331

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           R L ++G YPP+D L S+SRL       D
Sbjct: 332 RVLNQKGIYPPIDILPSLSRLMKDGIGED 360


>gi|27435896|gb|AAO13276.1| ATP synthase beta subunit [Sagittaria latifolia]
          Length = 489

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ KS V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENITKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085227|gb|AAX63016.1| ATP synthase beta subunit [Gymnosporia senegalensis]
          Length = 483

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|325529707|gb|EGD06569.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. TJI49]
          Length = 276

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 114/202 (56%), Gaps = 3/202 (1%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           L +V+  +     + P+G    +S    V   GR  + P      GRV++ LG+P+D D 
Sbjct: 76  LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGDGLFGRVLDGLGRPLD-DR 134

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G   +      P  + R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTL
Sbjct: 135 GPVAGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 194

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
           L M AR    D  +I+LVGERGREVREFIE  L   ++ +S+VVV+TSD   + R  + L
Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254

Query: 237 TAVTIAEYFSSKGDNVLLILDS 258
            A  IAE+F   G  VLL++DS
Sbjct: 255 VATAIAEHFRDAGRRVLLLVDS 276


>gi|4995717|emb|CAB44232.1| H(+)-transporting ATP synthase [Muntingia calabura]
          Length = 488

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGSVDTRTTAPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62085229|gb|AAX63017.1| ATP synthase beta subunit [Paxistima canbyi]
          Length = 483

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|228016009|gb|ACP50848.1| ATP synthase CF1 beta subunit [Pinus resinosa]
          Length = 492

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|209963703|ref|YP_002296618.1| F0F1 ATP synthase subunit beta [Rhodospirillum centenum SW]
 gi|209957169|gb|ACI97805.1| ATP synthase F1, beta subunit [Rhodospirillum centenum SW]
          Length = 487

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 8/293 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG+P D  + +        I    PP   +      F+TGI+VID+  PL  G 
Sbjct: 94  GRLVDVLGRPGDAGEPITAEAPRWPIHRPAPPLAGQTPRRDVFETGIKVIDLLAPLARGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ L++    +    +  +S+   +GER RE +E +E+      L+++ 
Sbjct: 154 KGGMFGGAGVGKTVLVTELIHNMVAQQTGLSVFAGIGERSREGQELLEEMRRSGVLERTA 213

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LTA+TIAE+F  +   +VLL++D++ RF  +  E++   G LP
Sbjct: 214 LVFGQMNEPPGARWRVGLTALTIAEWFRDEARRDVLLLMDNVFRFVQAGAEVSGLLGRLP 273

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +E+  L ERI  +      +TA+ +V V  D+  DP    +   LD  IV
Sbjct: 274 SRVGYQPTLITEIAELEERI--ASVPGATVTAIQAVYVPADDFTDPAVAELFGHLDSAIV 331

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+RS+A EG YP VDPLAS S L D     +E  +    +  L+  + E +DI
Sbjct: 332 LSRSMAAEGLYPAVDPLASSSALLDPLVVGEEHYRTAEDVRALLAHYRELQDI 384


>gi|126178239|ref|YP_001046204.1| V-type ATP synthase subunit B [Methanoculleus marisnigri JR1]
 gi|167016632|sp|A3CS72|VATB_METMJ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|125861033|gb|ABN56222.1| ATP synthase, B subunit [Methanoculleus marisnigri JR1]
          Length = 461

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 23/361 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC 102
           +   D  V +G+  D   +++ +    V+    GIG +     + F     ++       
Sbjct: 31  IVTADGTVKRGQVLDTSDEIVVVQ---VFETTAGIGRD---SGIRFTGETIKMPVGKDML 84

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++  GKPIDG   +   +  +EI         R   E   +TGI  ID    L  GQ
Sbjct: 85  GRILSGGGKPIDGGPDIVP-EKRLEITGAAINPYARSSPEDFIQTGISTIDGTNTLVRGQ 143

Query: 163 RIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           ++ +F+ SG+  + +    AR       ++ F  V+ + +G    E   F+ D+     L
Sbjct: 144 KLPIFSASGLPHNDVALQIARQAKVPGSTEEF-AVVFAAMGITREEANYFMADFEKTGAL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
           ++SVV +  +D+  + R + P  A+T AEY +   G +VL+IL  +T +  ++R+I    
Sbjct: 203 ERSVVFLNLADDPAVERTITPRLALTTAEYLAFDLGYHVLVILTDMTNYCEALRQIGAAR 262

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L  + ER G  +  KG++T +  + + GD+   PI D    I +
Sbjct: 263 EEVPGRRGYPGYMYTDLASIYERAGIIKGVKGSVTQIPILTMPGDDITHPIPDLTGYITE 322

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDI 389
           G IV+NR L  +G YPP++ L S+SRL +    +  + ++ K VS    L   + E  D+
Sbjct: 323 GQIVVNRELHRKGIYPPINVLPSLSRLMNLGIGEGHTREDHKKVSD--QLYAAYAEGNDL 380

Query: 390 R 390
           R
Sbjct: 381 R 381


>gi|7688411|emb|CAB89743.1| ATP synthase beta subunit [Utricularia gibba]
          Length = 481

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|62085217|gb|AAX63011.1| ATP synthase beta subunit [Denhamia celastroides]
          Length = 481

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|150035733|gb|ABR67212.1| ATP synthase beta subunit [Streptochaeta angustifolia]
          Length = 479

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 87  ATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 143

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 144 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 203

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 204 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 322 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 381

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 382 ELQDIIAILG 391


>gi|123778432|sp|Q0QEP2|ATPB_MESAU RecName: Full=ATP synthase subunit beta, mitochondrial
 gi|89574019|gb|ABD77235.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Mesocricetus auratus]
          Length = 362

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 17/299 (5%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+PI+    +     +  I ++ P  +N    ++   TGI+V+D+  P   G +IG+F 
Sbjct: 1   IGEPINERGPIKTKQFA-PIHAEAPDFLNMSVDQEILVTGIKVVDLLAPYAKGGKIGLFG 59

Query: 169 GSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKS 217
           G+ +GK+ L+    +  A++     V    VGER RE      E IE     L D   K 
Sbjct: 60  GAVVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINLKDATSKV 118

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 119 ALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRI 178

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 179 PSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 236

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           VL+R++AE G YP VDPL S SR+ D     +E   V+  +  ++  ++  +DI  I G
Sbjct: 237 VLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILG 295


>gi|44885372|dbj|BAD11929.1| ATP synthase beta subunit [Nitella spiciformis]
 gi|44885374|dbj|BAD11930.1| ATP synthase beta subunit [Nitella spiciformis]
          Length = 340

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|306832293|ref|ZP_07465447.1| V-type ATP synthase, subunit B [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425732|gb|EFM28850.1| V-type ATP synthase, subunit B [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 464

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 163/334 (48%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L +  +H G+     GQV+ +  D  +V +     G  +    + F      +  S
Sbjct: 27  HYNELVEIKLHNGEVRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGHPLELPVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N +GKPIDG   L   +  ++I  +    + R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFNGMGKPIDGGPDLIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRQT 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L+  L   G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSHELYNSGYRPPINVLPSLSRLKDKG 357


>gi|153853533|ref|ZP_01994913.1| hypothetical protein DORLON_00902 [Dorea longicatena DSM 13814]
 gi|149753688|gb|EDM63619.1| hypothetical protein DORLON_00902 [Dorea longicatena DSM 13814]
          Length = 457

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 173/355 (48%), Gaps = 28/355 (7%)

Query: 61  QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG--- 115
           +V+ IN +  +V +     G  +S   + F      +  S    GRV + LG+PIDG   
Sbjct: 43  KVLEINGNDALVQLFESATGINLSNSKVRFLGRSMELGVSEDMLGRVFDGLGRPIDGGPE 102

Query: 116 ---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
              D+      L M   ++  P       E+  +TG+  ID    L  GQ++ +F+ SG+
Sbjct: 103 ILPDERRDINGLPMNPAARSYP-------EEFIQTGVSAIDGLNTLVRGQKLPIFSASGL 155

Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
             + L +  A+      S+    V+ + +G    E   F+E +     + ++V+ V  ++
Sbjct: 156 PHANLAAQIAKQAKVRGSNEKFAVVFAAMGITFEESNFFVESFKETGAIDRTVLFVNLAN 215

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY + + D +VL+I+  IT +A ++RE++    E+P  RGYP 
Sbjct: 216 DPAIERISTPRMALTAAEYLAFEKDMHVLVIMTDITNYADALREVSAARKEVPGRRGYPG 275

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            ++++L  L ER G    +KG+IT +  + +  D+   PI D    I +G I+L+R L  
Sbjct: 276 YMYTDLATLYERAGRQNGKKGSITLIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYR 335

Query: 345 EGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +G  PP+D L S+SRL DK        AD    ++ L     R ++ +++  I G
Sbjct: 336 KGIKPPIDVLPSLSRLKDKGIGEGKTRADHANTMNQLFAAYARGKDAKELMTILG 390


>gi|113910816|gb|ABI48140.1| ATPase beta subunit [Lejeunea cavifolia]
          Length = 455

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 68  ATLGRIFNVLGEPVD---NLGPVEASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 124

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 125 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESK 183

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 184 VINEENISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 241

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 242 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 299

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 300 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTL 358

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 359 QRYKELQDIIAILG 372


>gi|288932642|ref|YP_003436702.1| ATP synthase subunit beta [Ferroglobus placidus DSM 10642]
 gi|288894890|gb|ADC66427.1| ATP synthase, B subunit [Ferroglobus placidus DSM 10642]
          Length = 462

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 158/314 (50%), Gaps = 10/314 (3%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           S   GQV+  + D+V +        I     V   G   R++ S    GR+ N  G+PID
Sbjct: 37  STRRGQVLDTSKDVVVVQVFEGTRGIDTSSTVRFTGDIVRLNVSYDMLGRIFNGSGEPID 96

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I + + P   R+   +  +TGI  ID    L  GQ++ +F+GSG+  
Sbjct: 97  GGPKIVPEERREIIGAAINP-YAREYPREFIQTGISAIDGMNTLVRGQKLPIFSGSGLPH 155

Query: 175 STLLSMFARSDCFD------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
           + +    AR            V+ + +G    E   F++D+     L+++VV +  +++ 
Sbjct: 156 NDIALQVARQAKVRGEGEEFAVVFAAMGITHEEAHYFMQDFERTGALERAVVFLNLANDP 215

Query: 228 PILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            I R + P  A+T AE+ + + D +VL+IL  +T +  ++REI+    E+P  RGYP  +
Sbjct: 216 AIERLLTPRMALTAAEFLAYEYDLHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYM 275

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  + ER G     KG IT +  + + GD+   PI D    I +G IVL+R L  +G
Sbjct: 276 YTDLATIYERAGRIRGRKGTITQMPILTMPGDDITHPIPDLTGYITEGQIVLSRELHAKG 335

Query: 347 RYPPVDPLASVSRL 360
            YPP++ L S+SRL
Sbjct: 336 IYPPINVLPSLSRL 349


>gi|149384465|gb|ABR25055.1| ATP synthase beta chain [Sphaeropteris capitata]
          Length = 394

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 163/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|145508197|ref|XP_001440048.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407254|emb|CAK72651.1| unnamed protein product [Paramecium tetraurelia]
          Length = 503

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 42/308 (13%)

Query: 89  HWGRFRI------SPSACWCGRVINALGKPID---GDDSLGKGDLSMEIMSKVPPAMNRQ 139
           H G  R+      S      G+ ++ LG PI    G ++LG+      IM+ + P   + 
Sbjct: 74  HLGDSRVRTIAMDSTEGLIRGQPVSDLGGPITIPVGPETLGR------IMNVIGPIETKI 127

Query: 140 R----------VEKG-----FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           R          V++G       TGI+V+D+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 128 RYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINN 187

Query: 185 DCFDK---VIISLVGERGREVREFIEDYLGDNL------KKSVVVVATSDESPILRKMAP 235
                    + + VGER RE  +   + +   +       +  ++    +E P  R    
Sbjct: 188 VAKAHGGYSVFAGVGERTREGNDLYHEMVASGVINLSGGSRCALIYGQMNEPPGARARVG 247

Query: 236 LTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ ++L +L 
Sbjct: 248 LTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGQLQ 307

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R+L E G YP VDPL
Sbjct: 308 ERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRALTELGIYPAVDPL 365

Query: 355 ASVSRLAD 362
            S SR+ D
Sbjct: 366 DSSSRMMD 373


>gi|257852948|gb|ACV71485.1| ATP synthase beta subunit [Eliea articulata]
          Length = 497

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID D  L     +  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPID-DLGLVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++      
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +   K    +  K    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQLKIVGEEHYKTAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|197132384|gb|ACH47710.1| ATP synthase CF1 beta subunit [Pelargonium cotyledonis]
          Length = 498

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEQKVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDQHYEIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|18075915|emb|CAD11914.1| ATP synthase beta subunit [Columellia oblonga]
          Length = 489

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGQDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMYVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+   +   +   + R++E +D
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQRVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|289651621|ref|ZP_06482964.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi
           str. 2250]
          Length = 174

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 92/153 (60%)

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +VL +GD+  DPIADS R +LD
Sbjct: 4   GEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLD 63

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAEEG YP +D  AS+SR+     S +          L  R+++TRD+  +G
Sbjct: 64  GHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVG 123

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            Y  G D   D A+   P++  + +Q   D  S
Sbjct: 124 AYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 156


>gi|257852952|gb|ACV71487.1| ATP synthase beta subunit [Vismia rubescens]
          Length = 490

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 22/306 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D  +   + + PPA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---DLGLIDTRTTSPIHRSPPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKES 219

Query: 211 ----GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+TIAEYF      +VLL +D+I RF 
Sbjct: 220 GVINQENIAESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGTEHYETAQRVKQTLQR 397

Query: 383 FEETRD 388
           ++E +D
Sbjct: 398 YKELQD 403


>gi|239905119|ref|YP_002951858.1| ATP synthase subunit beta [Desulfovibrio magneticus RS-1]
 gi|239794983|dbj|BAH73972.1| ATP synthase subunit beta [Desulfovibrio magneticus RS-1]
          Length = 470

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 13/300 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N +G+P+D    +G  D    M I    P  +++    +  +TGI+VID+  P   
Sbjct: 95  GRILNVVGRPVD---EMGPVDSKTFMPIHRAAPAFVDQSTSIQLLETGIKVIDLLIPFPK 151

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216
           G ++G+F G+G+GK+ +L     +       +S+   VGER RE  +   ++   D L K
Sbjct: 152 GGKLGLFGGAGVGKTVVLMELINNIAKHHGGLSVFAGVGERTREGNDLYNEFKEADILGK 211

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275
           + +V    +E P  R    LTA+T AEYF   +G +VLL +D+I RF  +  E++   G 
Sbjct: 212 ASLVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 271

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ ++L  L ERI  +   KG+IT+V +V V  D+  DP   +  S LDG 
Sbjct: 272 MPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSHLDGT 329

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +AE G YP VDPL S SR+ D      +       +  ++ ++++ +DI  I G
Sbjct: 330 LVLSRQIAELGIYPAVDPLDSTSRILDPNVLGGEHYGTAREVQSILQKYKDLQDIIAILG 389


>gi|229488195|gb|ACQ73742.1| ATP synthase [Bornetella nitida]
          Length = 349

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D  G+ +  +G   + I    P  ++       F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVDNLGEVATKEG---LPIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E
Sbjct: 237 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYNCAQNVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|225570040|ref|ZP_03779065.1| hypothetical protein CLOHYLEM_06136 [Clostridium hylemonae DSM
           15053]
 gi|225161510|gb|EEG74129.1| hypothetical protein CLOHYLEM_06136 [Clostridium hylemonae DSM
           15053]
          Length = 460

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 25/362 (6%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +FV+    ++  +G+++ +  D   I      E +SL +    L  H     +SP     
Sbjct: 31  EFVID--SSTRKMGRIVELYEDRAVIQVFEGTENMSLQNTHTKLTGHPMEIAVSPD--ML 86

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR  N +G+PIDG   +   D  M  ++ +P    R+   + + +TGI  ID  T L  G
Sbjct: 87  GRTFNGIGQPIDGLGPIVSDD--MRDVNGLPLNPVRREYPRNYIRTGISAIDGLTTLIRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERG--REVREFIEDYLGDN-L 214
           Q++ +F+G+G+    L +   +     D  D+    + G  G   +V EF +    ++ +
Sbjct: 145 QKLPIFSGNGLPHDQLAAQIVKQASLGDNSDEQFAVVFGAMGVKHDVAEFFQKTFEESGV 204

Query: 215 KKSVVVVATSDESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
              V +       P++ ++  P  A+T+AEY + + + ++L+IL  +T FA ++RE++++
Sbjct: 205 ADHVCMFLNLANDPVVERLITPKVALTVAEYLAFEQNMHILVILTDMTSFAEAMREVSSS 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE+P  +GYP  ++SEL  + ER G  E   G++T +  + +  D+   PI D    I 
Sbjct: 265 KGEIPSRKGYPGYLYSELATIYERAGIIEGANGSVTQLPILTMPNDDITHPIPDLTGYIT 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETR 387
           +G +VL+RSL  +  YPP+  L S+SRL      A     D + L + L     +  E R
Sbjct: 325 EGQVVLDRSLHGQAIYPPISILPSLSRLMKDGIGAGYTREDHQDLANQLFSAYAKVGEAR 384

Query: 388 DI 389
           ++
Sbjct: 385 NL 386


>gi|149384471|gb|ABR25058.1| ATP synthase beta chain [Sphaeropteris megalosora]
          Length = 426

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 172/336 (51%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 40  GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 97  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 156

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 217 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 275 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 333

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 334 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|8452711|emb|CAB89950.2| ATP synthase beta subunit [Opilia sp. Chase 1902]
          Length = 481

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    PP +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPPFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INXXNIAESKVALVYGQMNEPPGARMRXGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|5758884|gb|AAD50858.1| ATP synthase beta subunit [Hedychium flavum]
          Length = 496

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G D++       I       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSIPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIELDTKFSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|288906246|ref|YP_003431468.1| V-type sodium ATP synthase, subunit B [Streptococcus gallolyticus
           UCN34]
 gi|325979219|ref|YP_004288935.1| V-type H+-transporting ATPase subunit B [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288732972|emb|CBI14551.1| Putative V-type sodium ATP synthase, subunit B [Streptococcus
           gallolyticus UCN34]
 gi|325179147|emb|CBZ49191.1| V-type H+-transporting ATPase subunit B [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 464

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 163/334 (48%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L +  +H G+     GQV+ +  D  +V +     G  +    + F      +  S
Sbjct: 27  HYNELVEIKLHNGEVRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGHPLELPVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N +GKPIDG   L   +  ++I  +    + R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFNGMGKPIDGGPDLIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+  + L +  AR      SD    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRQT 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L+  L   G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSHELYNSGYRPPINVLPSLSRLKDKG 357


>gi|14718224|gb|AAK72850.1| ATP synthase beta subunit [Siphonodon celastrineus]
          Length = 485

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKFSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6688527|emb|CAB65168.1| ATP synthase beta subunit [Solanum lycopersicum]
          Length = 498

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           +V QG+  D++GQ I +  ++        V    +   E ++ G  V   G    +    
Sbjct: 47  LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATEGLTRGMAVIDTGAPISVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|62902810|gb|AAY19320.1| ATP synthase beta subunit [Empleuridium juniperinum]
          Length = 488

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62085206|gb|AAX63007.1| ATP synthase beta subunit [Tripterygium regelii]
          Length = 487

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119350493|gb|ABL63197.1| AtpB [Geminella minor]
          Length = 389

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 28/311 (9%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +    + I    P  ++       F+TGI+V+D+  P   
Sbjct: 36  GRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 92

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            
Sbjct: 93  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 151

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E+ +G++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 152 EENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 209

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 210 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 267

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R+
Sbjct: 268 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTLQRY 326

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 327 KELQDIIAILG 337


>gi|42559018|gb|AAS20195.1| ATP synthase beta subunit [Cyperus papyrus]
          Length = 468

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D+S    I    P  +        F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPID---NLGPVDISTISPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP V PL S S +   +   DE  +    +     R++
Sbjct: 318 ATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTMLQPSIVGDEHYETAQRVKQTSQRYK 377

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 378 ELQDIIAILG 387


>gi|21684899|emb|CAD11576.1| ATP synthase beta subunit [Distichia acicularis]
          Length = 465

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S  + I    P  +         +TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGQPID---NLGPVDTSTTLPIHRSAPAFIELDTKLSILETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDY 209
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE     +E  E  
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFAGVGERTREGNDLYKEMKESG 214

Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 215 VINEKKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQKDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP V+PL S S +        E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRPLAAKGIYPAVNPLDSTSTILQSNIVGKEHYETAQRVKQTSQRY 392

Query: 384 EETRDI 389
           +E +D+
Sbjct: 393 KELQDV 398


>gi|21684877|emb|CAD11565.1| ATP synthase beta subunit [Chorizandra enodis]
          Length = 487

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 156/317 (49%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+
Sbjct: 92  LRVPVGGVTLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFVQLDTKLSIFETGIK 148

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 149 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYI 208

Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDS 258
                      NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+
Sbjct: 209 EMKESGVINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDN 268

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D
Sbjct: 269 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPAD 326

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R+LA +G YP V PL S S +       +E  +    + 
Sbjct: 327 DLTDPAPATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVGEEHYETAQEVK 386

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 387 QTLQRYKELQDIIAILG 403


>gi|163813969|ref|ZP_02205363.1| hypothetical protein COPEUT_00122 [Coprococcus eutactus ATCC 27759]
 gi|158450839|gb|EDP27834.1| hypothetical protein COPEUT_00122 [Coprococcus eutactus ATCC 27759]
 gi|295094162|emb|CBK83253.1| Archaeal/vacuolar-type H+-ATPase subunit B [Coprococcus sp.
           ART55/1]
          Length = 456

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 164/333 (49%), Gaps = 29/333 (8%)

Query: 98  SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           S    GRV + LG+PIDG      D+      L M   ++  P+       +  +TGI  
Sbjct: 82  SEDMLGRVFDGLGRPIDGGPEILPDERRDINGLPMNPAARNYPS-------EFIQTGISA 134

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205
           ID    L  GQ++ +F+ SG+  S L +  AR      +D    V+ + +G    E   F
Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHSQLAAQIARQAKVRGTDEPFAVVFAAMGITFEEANFF 194

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263
            E +     + ++V+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A
Sbjct: 195 TESFKETGAIDRTVLFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYA 254

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++RE++    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   P
Sbjct: 255 DALREVSAARKEVPGRRGYPGYMYTDLATLYERAGRQKGKNGSITMIPILTMPEDDKTHP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381
           I D    I +G I+L+R L  +G  PP+D L S+SRL DK     + +    S++  L  
Sbjct: 315 IPDLTGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGTGEGKTRGDHASTMNQLFA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            +   +D + +      + ++ + A+  + IIY
Sbjct: 375 AYSRGKDAKEL------MTILGESALSDIDIIY 401


>gi|152995978|ref|YP_001340813.1| F0F1 ATP synthase subunit beta [Marinomonas sp. MWYL1]
 gi|190358210|sp|A6VWP9|ATPB1_MARMS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|150836902|gb|ABR70878.1| ATP synthase F1, beta subunit [Marinomonas sp. MWYL1]
          Length = 489

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 152/293 (51%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQ 162
           R+ +  G  ID  D+    D+    +   PP + R+  + + F+TGI+VID+  PL  G 
Sbjct: 96  RMFDVFGNTIDKKDA--PIDVEWRSVHNEPPPLARRSTKTEVFETGIKVIDVLMPLERGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKSVV 219
           + G+F G+G+GK+ LL+    +       +S+   +GER RE  E   +     +  S+V
Sbjct: 154 KAGLFGGAGVGKTVLLTEMIHNMVGQHAGVSIFCGIGERCREGEELYREMKEAGVLDSMV 213

Query: 220 VV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  E++   G++P
Sbjct: 214 MMFGQMNEPPGARFRVGHAALTMAEYFRDDEHRDVLLLMDNIFRFIQAGMEVSGLMGQMP 273

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL +L ERI  +    G IT++ +V V  D+  DP A    S L   IV
Sbjct: 274 ARLGYQPTMGTELSQLEERI--ANTGSGAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 331

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP +DPL S S++A  +        L   +   + ++ E +DI
Sbjct: 332 LSRKRASEGLYPAIDPLQSSSKMATPSIIGKRHYDLAQEIRRTLAQYSELKDI 384


>gi|19033085|gb|AAL83527.1|AF408799_1 ATP synthase beta subunit [Zygnema peliosporum]
          Length = 402

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG    +   EI    P           F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVNANTKFEIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W    +   +   +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGVEHYDIAQGVKQTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|21684921|emb|CAD11587.1| ATP synthase beta subunit [Xyris capensis]
          Length = 441

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID   +LG  D S    I    P  +  +     F+TGI+V+D+  P  
Sbjct: 56  LGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPTFVQLETRLXIFETGIKVVDLLAPYR 112

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 113 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVIN 172

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 173 EKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 232

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 233 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 290

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E 
Sbjct: 291 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQRYKEL 350

Query: 387 RDIRLIGG 394
           +D+  I G
Sbjct: 351 QDMIAILG 358


>gi|3850916|gb|AAC72150.1| ATP synthase beta subunit [Conospermum mitchellii]
          Length = 488

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + H + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKHTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|284039966|ref|YP_003389896.1| ATP synthase F1 subunit beta [Spirosoma linguale DSM 74]
 gi|283819259|gb|ADB41097.1| ATP synthase F1, beta subunit [Spirosoma linguale DSM 74]
          Length = 508

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 39/329 (11%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG        + + I    P   +     +   TGI+VID+  P   G 
Sbjct: 95  GRLFNVVGEAIDGIPQPTTTGVGLPIHRSAPKFEDLATSTEVLFTGIKVIDLLEPYAKGG 154

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE IE  +   GD
Sbjct: 155 KIGLFGGAGVGKTVLIQELINNIAKAYAGLSVFAGVGERTREGNDLLREMIEAGIIRYGD 214

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246
             K S+                      V    +E P  R    L+ +TIAE+F      
Sbjct: 215 AFKHSMEEGGWDLTKVDLQEMTNSQATFVFGQMNEPPGARARVALSGLTIAEHFRDGDGE 274

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G+
Sbjct: 275 GEGRDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGVMQERI--TSTKRGS 332

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 333 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKISELGIYPAVDPLDSTSRILSAEIL 392

Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            DE       +  ++ R++E +DI  I G
Sbjct: 393 GDEHYNTAQRVKEILQRYKELQDIIAILG 421


>gi|14718134|gb|AAK72806.1| ATP synthase beta subunit [Mitchella repens]
          Length = 478

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPID---NLGPXDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELITNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +   ++   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQNVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|62085225|gb|AAX63015.1| ATP synthase beta subunit [Gymnosporia arbutifolia]
          Length = 484

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085212|gb|AAX63009.1| ATP synthase beta subunit [Celastrus scandens]
          Length = 482

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|222084091|ref|YP_002519544.1| ATP synthase CF1 beta chain [Keteleeria davidiana]
 gi|220983643|dbj|BAH11409.1| ATP synthase CF1 beta chain [Keteleeria davidiana]
          Length = 487

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 164/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDANEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|149384669|gb|ABR25143.1| ATP synthase beta chain [Lomariopsis sorbifolia]
          Length = 426

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ L++    +         +   VGER RE      E  E  + D
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVID 155

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQAVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|332298328|ref|YP_004440250.1| V-type ATP synthase beta chain [Treponema brennaborense DSM 12168]
 gi|332181431|gb|AEE17119.1| V-type ATP synthase beta chain [Treponema brennaborense DSM 12168]
          Length = 465

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 185/368 (50%), Gaps = 22/368 (5%)

Query: 40  SQYVCLGDFVVHQGKNSDN-LGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRIS 96
           S+ V  G+ V  + ++ D   G+VI I+ +  +V I     G ++    + F      + 
Sbjct: 22  SENVFYGEIVAVRSRSGDKRTGRVIDISEEYAVVQIFGSTTGIDLDQTRVEFLDTPMELR 81

Query: 97  PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVIDI 154
                 GR+ N LGKPIDG   +     S +I     P     RV      +TG+  ID 
Sbjct: 82  VGEGLLGRIFNGLGKPIDGYPDIVS---SKKINVNGNPINPYARVYPRDFIQTGVSSIDG 138

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGR-EVREFIEDY 209
              L  GQ++ +F+G+G+  + L +   R     +  ++ ++   G   + +V +F  + 
Sbjct: 139 MNTLIRGQKLPIFSGNGLPHNRLAAQIIRQAKILNADEQFVMVFAGMGIKYDVAQFFINT 198

Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
             ++  L + V+  + +D   I R + P  A+T AEY +  KG +VL++L  +T +  ++
Sbjct: 199 FEESGVLSRVVMFQSLADAPSIERIITPRCALTAAEYLAYEKGMHVLVVLTDMTNYCEAL 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI+T  GE+P  +GYP  ++S+L  L ER G  +  KG+IT +  + +  D+ + PI D
Sbjct: 259 REISTTRGEVPGRKGYPGYLYSDLAELYERAGKIKGSKGSITQIPILTMPNDDISHPIPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHR 382
               I +G IVL+R ++++G YPPV  L S+SRL      +  + ++ K VSS   L   
Sbjct: 319 LTGYITEGQIVLDREMSQKGMYPPVAGLPSLSRLMKDGIGEGMTREDHKDVSS--QLFAA 376

Query: 383 FEETRDIR 390
           + + + IR
Sbjct: 377 YSKVKSIR 384


>gi|119350497|gb|ABL63199.1| AtpB [Geminella sp. SAG 20.84]
          Length = 390

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 28/311 (9%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +    + I    P  ++       F+TGI+V+D+  P   
Sbjct: 37  GRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 93

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            
Sbjct: 94  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 152

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E+ +G++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 153 EENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R+
Sbjct: 269 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|269798931|gb|ACZ43765.1| ATP synthase beta subunit [Corchoropsis crenata]
          Length = 473

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 203

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 204 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 262 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 319

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 320 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 379

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 380 QRYKELQDIIAILG 393


>gi|14718163|gb|AAK72820.1| ATP synthase beta subunit [Paropsia madagascariensis]
          Length = 477

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 37  KGRDTIGQQINVACEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 96

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 97  IFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEEN 213

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 214 ITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 273

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 274 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 331

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +        E  +   S+   + R++E +DI
Sbjct: 332 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGKEHYETAQSVKQTLQRYKELQDI 391

Query: 390 RLIGG 394
             I G
Sbjct: 392 ITILG 396


>gi|6689235|emb|CAB65397.1| ATP synthase beta subunit [Symphoricarpos albus]
          Length = 498

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTQLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 225

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E+
Sbjct: 226 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +D
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGQNHYETAQRVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|46360689|gb|AAS89126.1| ATP synthase beta subunit [Lepicolea attenuata]
          Length = 382

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR  N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   SGRNFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 59  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 117

Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 118 DEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 177

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R++
Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRYK 294

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 295 ELQDIIAILG 304


>gi|257484914|ref|ZP_05638955.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 171

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 92/153 (60%)

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +VL +GD+  DPIADS R +LD
Sbjct: 1   GEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLD 60

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL+R LAEEG YP +D  AS+SR+     S +          L  R+++TRD+  +G
Sbjct: 61  GHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVG 120

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            Y  G D   D A+   P++  + +Q   D  S
Sbjct: 121 AYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 153


>gi|115391911|ref|YP_778499.1| ATP synthase CF1 beta subunit [Jasminum nudiflorum]
 gi|122164964|sp|Q06RC2|ATPB_JASNU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|110456232|gb|ABG74637.1| ATPase beta subunit [Jasminum nudiflorum]
          Length = 498

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  K+   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7688417|emb|CAB89734.1| ATP synthase beta subunit [Verbena scabrido-glandulosa]
          Length = 442

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 62  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 118

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 119 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 178

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 179 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 238

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 239 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 296

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 297 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 356

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 357 KELQDIIAILG 367


>gi|89280642|ref|YP_514859.1| ATP synthase CF1 beta chain [Solanum lycopersicum]
 gi|118573750|sp|Q2MI93|ATPB_SOLLC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|84371990|gb|ABC56307.1| ATP synthase CF1 beta subunit [Solanum lycopersicum]
 gi|89241678|emb|CAJ32400.1| ATP synthase CF1 beta chain [Solanum lycopersicum]
          Length = 498

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           +V QG+  D++GQ I +  ++        V    +   E ++ G  V   G    +    
Sbjct: 47  LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATEGLTRGMAVIDTGAPISVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|44885344|dbj|BAD11915.1| ATP synthase beta subunit [Nitella tumulosa]
 gi|44885346|dbj|BAD11916.1| ATP synthase beta subunit [Nitella tumulosa]
          Length = 340

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|119350499|gb|ABL63200.1| AtpB [Geminella sp. SAG 54.81]
          Length = 392

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 28/311 (9%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +    + I    P  ++       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 154

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E+ +G++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 EENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 212

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 213 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 270

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R+
Sbjct: 271 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTLQRY 329

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 330 KELQDIIAILG 340


>gi|7708666|emb|CAB89993.1| ATP synthase beta subunit [Styrax japonicus]
          Length = 478

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|299830551|ref|YP_003734999.1| ATP synthase CF1 beta subunit [Durinskia baltica]
 gi|297384915|gb|ADI40214.1| ATP synthase CF1 beta subunit [Durinskia baltica]
          Length = 475

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 155/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G+P+D   ++   + ++ I    P     +     F+TGI+V+D+  P   G
Sbjct: 91  LGRIFNVIGEPVDEQGAVSVNE-TLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRG 149

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+     +   
Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINS 208

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 209 KNFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAGSE 268

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   + 
Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPATT 326

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +      S    ++  ++   + R++E +
Sbjct: 327 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVSETHYEVAETVKETLQRYKELQ 386

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 387 DIIAILG 393


>gi|184127867|gb|ACC67833.1| ATP synthase beta chain [Marattia melanesica]
          Length = 399

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 163/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 127

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  + 
Sbjct: 128 NQENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 187

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 188 SEVSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 245

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 246 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 304

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 305 ELQDIIAILG 314


>gi|20467395|gb|AAL27828.1| ATPase beta subunit [Pinus mugo]
          Length = 432

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 64  GATLGRIFNVLGEPVD---NLGPVDACITSPIHRPAPAFTELDTKLSIFETGIKVVDLLA 120

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 121 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 179

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 180 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 239

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 240 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 297

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 298 APATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 356

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 357 RYKELQDIIAI----PGLD 371


>gi|62902806|gb|AAY19318.1| ATP synthase beta subunit [Canotia holacantha]
          Length = 488

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|44885348|dbj|BAD11917.1| ATP synthase beta subunit [Nitella gracilens]
 gi|44885350|dbj|BAD11918.1| ATP synthase beta subunit [Nitella gracilens]
 gi|44885352|dbj|BAD11919.1| ATP synthase beta subunit [Nitella gracilens]
 gi|44885354|dbj|BAD11920.1| ATP synthase beta subunit [Nitella gracilens]
 gi|44885356|dbj|BAD11921.1| ATP synthase beta subunit [Nitella gracilens]
          Length = 340

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    + +  PA      +   F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|307277434|ref|ZP_07558526.1| ATP synthase [Enterococcus faecalis TX2134]
 gi|306505699|gb|EFM74877.1| ATP synthase [Enterococcus faecalis TX2134]
          Length = 458

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 160/320 (50%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+ IN D   +        I++ D     + H     +SP     GRV + LG+  D 
Sbjct: 42  GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99

Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
              L    K D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+ SG+
Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155

Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
               L +  AR      S+    V+ + +G   +E   F+ED+     + +SV+ +  ++
Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFKEAEYFMEDFRQTGAIDRSVLFMNLAN 215

Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP 
Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G     KG++T +  + +  ++   PI D    I +G I+L+R L +
Sbjct: 276 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335

Query: 345 EGRYPPVDPLASVSRLADKA 364
            G  PP+D L S+SRL DK 
Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355


>gi|309322105|ref|YP_003933921.1| ATP synthase CF1 beta subunit [Erodium texanum]
 gi|197132372|gb|ACH47704.1| ATP synthase CF1 beta subunit [Erodium texanum]
 gi|300069198|gb|ADJ66320.1| ATP synthase CF1 beta subunit [Erodium texanum]
          Length = 495

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GSTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIELDTKFSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 216

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 217 GVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 276

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 334

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 335 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 394

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 395 YKELQDIIAILG 406


>gi|164566157|gb|ABY61221.1| ATP synthase beta subunit [Marattia weinmanniifolia]
          Length = 394

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|34499992|gb|AAQ73578.1| ATP synthase beta subunit [Gallibacterium genomosp. 1]
          Length = 444

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+ +    I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDERGPIGEKE-RWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTRAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +V
Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSNKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G Y     L S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYLRWIRLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|169824770|ref|YP_001692381.1| V-type ATP synthase subunit B [Finegoldia magna ATCC 29328]
 gi|302380260|ref|ZP_07268732.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           ACS-171-V-Col3]
 gi|167831575|dbj|BAG08491.1| V-type sodium ATP synthase subunit B [Finegoldia magna ATCC 29328]
 gi|302312043|gb|EFK94052.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           ACS-171-V-Col3]
          Length = 462

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 164/316 (51%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D+  +      + I+L +    + GR   +  S    GRV + LG+PID   
Sbjct: 42  GRVVEIDHDVAMVQVFEGTKGINLQETTVRFLGRPLELGVSEDMIGRVFDGLGRPIDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I       ++R    +  +TG+  ID    L  GQ++ +F+GSG+  + L
Sbjct: 102 KIIPED-KVDINGSSINPVSRDYPSEFIETGVSTIDGLNTLVRGQKLPIFSGSGLPHNKL 160

Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR        D F  V+ + +G    E + FI D+     + ++V+ +  +D+  I
Sbjct: 161 AAQIARQAKVLGKDDKF-AVVFAAMGITFEEAQYFIGDFNKTGAIDRAVLFMNLADDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AE+ +  KG +VL+I+  +T +A ++RE++    E+P  RGYP  +++
Sbjct: 220 ERLSTPKMALTCAEFLAFEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G     +G+IT +  + +  D+   PI D    I +G I+L+R L ++G  
Sbjct: 280 DLATLYERAGKIVGREGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKKGYE 339

Query: 349 PPVDPLASVSRLADKA 364
           PP++ + S+SRL DK 
Sbjct: 340 PPINAIPSLSRLKDKG 355


>gi|6689309|emb|CAB65431.1| ATP synthase beta subunit [Billardiera heterophylla]
          Length = 498

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGTTLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPIDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           +++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|8452756|emb|CAB89994.1| ATP synthase beta subunit [Swietenia macrophylla]
          Length = 477

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D L+   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|62085221|gb|AAX63013.1| ATP synthase beta subunit [Elaeodendron orientale]
          Length = 486

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|62085161|gb|AAX62985.1| ATP synthase beta subunit [Micrantheum hexandrum]
          Length = 488

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 180/371 (48%), Gaps = 31/371 (8%)

Query: 48  FVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPS 98
            V+ +G+NS   GQ I +  ++        V    +   E +  G +++   G   +   
Sbjct: 39  LVIVKGRNST--GQQINVTCEVQQLLGNNRVRTVAMSATEGLMRGMEVIDTGGPLSVPVG 96

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +      + F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLEIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEYGGVSVFGGVGERTREGNDLYKEMKQSR 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +        E  +   S+   + R+
Sbjct: 332 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQPNIVGKEHYETAQSVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|130750316|gb|ABO32263.1| ATP synthase subunit B [Centrolepis monogyna]
          Length = 424

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D+S    I    P  ++       F+TGI+V+D+  P
Sbjct: 35  VTLGRIFNVLGEPVD---NLGPVDISATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYIEMKESG 150

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E  LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 151 VINEKDLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRF 208

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  +K +IT++ +V V  D+  D
Sbjct: 209 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTD 266

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 267 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQ 326

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 327 RYKELQDIIAILG 339


>gi|62902831|gb|AAY19330.1| ATP synthase beta subunit [Peripterygia marginata]
          Length = 485

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|62085215|gb|AAX63010.1| ATP synthase beta subunit [Dapania racemosa]
          Length = 486

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|269798927|gb|ACZ43763.1| ATP synthase beta subunit [Corchoropsis psilocarpa]
          Length = 474

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 204

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 205 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 262

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 263 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 320

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 321 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 380

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 381 QRYKELQDIIAILG 394


>gi|150035731|gb|ABR67211.1| ATP synthase beta subunit [Anomochloa marantoidea]
          Length = 479

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N ++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 202 VINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|89574023|gb|ABD77237.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Lepus europaeus]
          Length = 410

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 157/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  +     ++   TGI+V+ +  P    
Sbjct: 49  LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFIEMSVEQEILVTGIKVVYLLAPYAKV 107

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            ++ +F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 108 GKLALFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 166

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 167 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 226

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 227 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 284

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 285 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 344

Query: 389 IRLIGG 394
           I  I G
Sbjct: 345 IIAILG 350


>gi|12004111|gb|AAG43895.1|AF213764_1 ATP synthase beta subunit [Myrsine africana]
          Length = 486

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   D    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMDXXES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFMDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|28188339|gb|AAL92549.1| ATP synthase beta subunit [Coleochaete divergens]
          Length = 401

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D ++ + + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 37  ATLGRIFNVLGEPVD---ELGPVDSTITLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|62085210|gb|AAX63008.1| ATP synthase beta subunit [Celastrus orbiculatus]
          Length = 486

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|156530093|gb|ABU75143.1| AtpB [Cneorum tricoccon]
          Length = 480

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIXKSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNLAESKVALVYGQMNEPPGARMRXGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|14718038|gb|AAK72760.1| ATP synthase beta subunit [Durio zibethinus]
          Length = 478

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|4063544|gb|AAC98330.1| ATP synthase beta subunit [Floerkea proserpinacoides]
          Length = 456

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|11908164|gb|AAD11742.2| ATP synthase beta subunit [Swietenia macrophylla]
          Length = 477

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D L+   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|62902841|gb|AAY19335.1| ATP synthase beta subunit [Ruptiliocarpon caracolito]
          Length = 485

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIPLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|62085131|gb|AAX62971.1| ATP synthase beta subunit [Euphronia guianensis]
          Length = 497

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 154/306 (50%), Gaps = 22/306 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---ELGPVDSRTTYPIHRPAPAFIQLATKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESR 220

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +    NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G LP A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L          K    +  ++ R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPDIVGKKHYKTAQRVKQILQRY 398

Query: 384 EETRDI 389
           +E +D+
Sbjct: 399 KELQDV 404


>gi|58040602|ref|YP_192566.1| F0F1 ATP synthase subunit alpha [Gluconobacter oxydans 621H]
 gi|81672590|sp|Q5FNY6|ATPA2_GLUOX RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|58003016|gb|AAW61910.1| ATP synthase alpha chain [Gluconobacter oxydans 621H]
          Length = 507

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 167/336 (49%), Gaps = 11/336 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG+P+DG   + + +    +    P  ++R+ V +  +TG   ID   P+  GQ
Sbjct: 107 GRVVDPLGRPLDGKGPV-EAETWFPVERPAPAIIDRELVTEPVQTGTLAIDTLFPIGRGQ 165

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVV 219
           R  +      GK+T+   ++ A+       +   +G++   V+  IE      N  + ++
Sbjct: 166 RELIVGDRATGKTTIAVDAILAQKSNDMICVYVAIGQKTSSVQRVIETIRTRGNPDRCII 225

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA   E+P L  +AP  A+++AEYF  +G + LL++D +++ A + RE++  +G  P  
Sbjct: 226 VVARPAEAPGLCWIAPFAAMSMAEYFRDRGQHALLVIDDLSKHAATHREVSLLTGRPPGR 285

Query: 280 RGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  +F    RLLER     + K  G++TA+     +  N +  I  ++ SI DG IV
Sbjct: 286 EAYPGDIFYVHARLLERAAKLSAAKGGGSLTALPVAETEAGNLSAYIPTNLISITDGQIV 345

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           LNR+L ++G+ P VD   SVSR+   A S   +  V +L     +F E       GG   
Sbjct: 346 LNRTLFDQGQKPAVDVGVSVSRVGGAAQSPILRSSVGTLRLDYAQFIELEAFTRFGGL-- 403

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             D  + + + +   I   L+Q P   +  D+ QE+
Sbjct: 404 -PDTHVRQQLARGACIRATLRQGPH--APLDLLQEV 436


>gi|300866628|ref|ZP_07111316.1| ATP synthase subunit beta [Oscillatoria sp. PCC 6506]
 gi|300335400|emb|CBN56476.1| ATP synthase subunit beta [Oscillatoria sp. PCC 6506]
          Length = 482

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N +G+P+D    +G  +  + I    P     +     F+TGI+VID+  P  
Sbjct: 95  ATLGRIFNVIGEPVDNLGPVGASE-RLPIHRSAPAFTELETKPSVFETGIKVIDLLAPYR 153

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE     +E IE  + 
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELVNNIAKAHGGVSVFGGVG-ERTREGNDLYKEMIESGVI 212

Query: 212 DNLKKS----VVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265
           +   +S     +V    +E P  R    L+A+ +AEYF   SK D VLL +D+I RF  +
Sbjct: 213 NEEDRSKSKIALVYGQMNEPPGARMRVGLSALAMAEYFRDVSKQD-VLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTDMGDLQERI--TSTKEGSITSVQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +   A    D   +  ++   + R++
Sbjct: 330 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGEDHYAIARAVQATLQRYK 389

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 390 ELQDIIAILG 399


>gi|2655155|gb|AAB87887.1| ATP synthase beta subunit [Drosophila subobscura]
          Length = 323

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 16/260 (6%)

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE-- 201
           GI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  
Sbjct: 1   GIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGN 59

Query: 202 --VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLI 255
               E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL 
Sbjct: 60  DLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLF 119

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V
Sbjct: 120 IDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYV 177

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374
             D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+ 
Sbjct: 178 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVAR 237

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +  ++  ++  +DI  I G
Sbjct: 238 GVQKILQDYKSLQDIIAILG 257


>gi|44885380|dbj|BAD11933.1| ATP synthase beta subunit [Nitella axillaris]
 gi|44885382|dbj|BAD11934.1| ATP synthase beta subunit [Nitella axilliformis]
 gi|56342295|dbj|BAD74009.1| ATP synthase beta subunit [Nitella axilliformis]
 gi|56342297|dbj|BAD74010.1| ATP synthase beta subunit [Nitella axilliformis]
 gi|59857520|dbj|BAD89761.1| ATP synthase beta subunit [Nitella axilliformis]
          Length = 340

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    I    P   +       F+TGI+V+D+  P  
Sbjct: 20  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTDLDTKLSIFETGIKVVDLLAPYR 76

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 77  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 314 LQDIIAILG 322


>gi|231586|sp|P29685|ATPBM_HEVBR RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|18831|emb|CAA41401.1| mitochondrial ATP synthase beta-subunit [Hevea brasiliensis]
          Length = 562

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 25/304 (8%)

Query: 109 LGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           +G+PID      +GD+     + I  + P  +++   ++   TGI+V+D+  P   G +I
Sbjct: 179 IGEPIDE-----RGDIKTSHFLPIHREAPAFVDQATEQQILVTGIKVVDLLAPYQRGGKI 233

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGDNL 214
           G+F G+G+GK+ L+     +         + + VGER RE     RE IE     LGD  
Sbjct: 234 GLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQ 293

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LT +T+AE+F  ++G +VLL +D+I RF  +  E++ 
Sbjct: 294 ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSA 353

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   +  + 
Sbjct: 354 LLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAH 411

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E G YP VDPL S SR+       +E       +  ++  ++  +DI 
Sbjct: 412 LDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDII 471

Query: 391 LIGG 394
            I G
Sbjct: 472 AILG 475


>gi|56236572|gb|AAV84653.1| ATP synthase beta subunit [Abies lasiocarpa]
          Length = 411

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 149

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 150 GVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   V +R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 268 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQ 326

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 327 RYKELQDIIAI----PGLD 341


>gi|61968245|gb|AAX57049.1| ATP synthase beta subunit [Gonatogyne brasiliensis]
          Length = 479

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     RE  E  
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYREMKESG 208

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +   +NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|269798925|gb|ACZ43762.1| ATP synthase beta subunit [Corchoropsis psilocarpa]
          Length = 470

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 203

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 204 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 262 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 319

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 320 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 379

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 380 QRYKELQDIIAILG 393


>gi|124361818|gb|ABN09351.1| ATP synthase beta subunit [Styrax benzoin]
          Length = 465

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|4995191|emb|CAB44036.1| H(+)-transporting ATP synthase [Heliocarpus americanus]
          Length = 482

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|7524980|ref|NP_050078.1| ATPase subunit 1 [Dictyostelium discoideum]
 gi|74949694|sp|Q9XPJ9|ATPAM_DICDI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|4958883|dbj|BAA78060.1| ATPase subunit 1 [Dictyostelium discoideum]
          Length = 519

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 201/423 (47%), Gaps = 27/423 (6%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L +++  Y K L ++ G +         V+ LSQ + +G+ V   GKN   +     +NL
Sbjct: 36  LNKVSSKYGKVLFIKDGVVK--------VSGLSQ-IKIGEKVEFVGKNLYGMA----LNL 82

Query: 68  DIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG--KG 122
           +   +  V  GE+ ++  G +V    + F I       GRV++ LG+PIDG   L   K 
Sbjct: 83  EATSVGIVIFGEDTAIYEGVIVKRCEQNFAIKVDKTMLGRVVDVLGQPIDGLGELKDTKT 142

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M +  K P  + R+ V +   TG++++D   P+  GQR  +      GKS +     
Sbjct: 143 TRVMSVERKAPGIVTRKSVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSAIAVDAI 202

Query: 183 RSDCFDKVIISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTA 238
            +   +K I+ +   VG++   VR  +E       L+ ++VVV+T+ ++  L+ +AP T 
Sbjct: 203 LNQQVNKDIVCIYVAVGQKKSTVRRLVEMLNTKGALEYTIVVVSTASDAAPLQFLAPYTG 262

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TI EYF  +G + L++ D +++ A + R+++      P    YP  VF    RLLER  
Sbjct: 263 CTIGEYFRDEGKHALIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAA 322

Query: 299 PSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
              ++   G++TA   V     + +  I  ++ SI DG I L + L  +G  P V+   S
Sbjct: 323 KLNEKYGCGSLTAFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGLS 382

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+   A SA  KKL  +L   + ++   R++     +    D +  + + +  +  + 
Sbjct: 383 VSRVGSAAQSAVMKKLAGALKLELAQY---RELARFEQFSSNADAVTTQILKKGKLTIEL 439

Query: 417 LKQ 419
           LKQ
Sbjct: 440 LKQ 442


>gi|11466372|ref|NP_038375.1| ATP synthase CF1 beta subunit [Mesostigma viride]
 gi|12585166|sp|Q9MUT5|ATPB_MESVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7259515|gb|AAF43816.1|AF166114_28 CF1 beta subunit of ATP synthase [Mesostigma viride]
          Length = 481

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTP 157
            GR+ N LG+P+DG      GD+  +  S +    P  +        F+TGI+V+D+  P
Sbjct: 96  LGRIFNVLGEPVDG-----LGDVVAKTKSPIHRNSPTFIELDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +NL  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 211 INEENLSSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRF 383
            +  + LD   VL+R+LA +G YP VDPL S S +  + W   E+   ++  +   + R+
Sbjct: 329 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYGTAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|309322400|ref|YP_003934480.1| ATP synthase CF1 beta chain [Cathaya argyrophylla]
 gi|307683326|dbj|BAJ19633.1| ATP synthase CF1 beta chain [Cathaya argyrophylla]
          Length = 492

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVINKQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQ 394

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 395 RYKELQDIIAI----PGLD 409


>gi|281209914|gb|EFA84082.1| ATP synthase beta chain [Polysphondylium pallidum PN500]
          Length = 704

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 171/347 (49%), Gaps = 25/347 (7%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    + I + +S G +V + G   ++       GR++N  G+PIDG   + K    + 
Sbjct: 191 VVRCVALEITDGLSRGTVVQNTGAPLKVPVGRPTLGRIMNVTGEPIDGCGPI-KASERLP 249

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----AR 183
           I  + P         +   TGI+VID+ TP   G +IG+F G+G+GK+ L+       A+
Sbjct: 250 IWREPPKFDELAPSAEILVTGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIQELINNVAK 309

Query: 184 SDCFDKVIISLVGERGREVREFIEDYL----------GDNLK----KSVVVVATSDESPI 229
           S     V    VGER RE  +   + +          G+       K  +V    +E P 
Sbjct: 310 SHGGFSVFTG-VGERTREGNDLYHEMVTAGVIKLQGSGETFSTEGSKVSLVFGQMNEPPG 368

Query: 230 LRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R    LT +T+AEYF  ++  +VLL +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 369 ARARVTLTGLTVAEYFRDAENQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLAT 428

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           ++  + ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G Y
Sbjct: 429 DMGSMQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAVSELGIY 486

Query: 349 PPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           P VDPL S S + D     +E  K  + +  ++  ++  +DI  I G
Sbjct: 487 PAVDPLDSTSLMLDPNIIGEEHYKTATDVQKILQEYKGLQDIIAILG 533


>gi|172072905|ref|YP_001806666.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
 gi|171854924|dbj|BAG16664.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
 gi|239794293|dbj|BAH73290.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
 gi|239794375|dbj|BAH73371.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
          Length = 491

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 160/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D    LG  D L+   + +  PA  +       F+TG
Sbjct: 94  GPLSVPVGETTLGRIFNVLGEPVD---DLGPVDALTRSPIHRSAPAFTQLDTRFSIFETG 150

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 151 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 209

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 210 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 269

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 270 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 327

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +   
Sbjct: 328 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 387

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 388 GVKQTLQRYKELQDIIAILG 407


>gi|119350495|gb|ABL63198.1| AtpB [Geminella minor]
          Length = 380

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 161/314 (51%), Gaps = 28/314 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +    + I    P  ++       F+TGI+V+D+  P
Sbjct: 26  ATLGRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAP 82

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 83  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 141

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ +G++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 142 VINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 199

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  D
Sbjct: 200 VQAGSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTD 257

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   +
Sbjct: 258 PAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTL 316

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 317 QRYKELQDIIAILG 330


>gi|19033099|gb|AAL83534.1|AF408806_1 ATP synthase beta subunit [Mesostigma viride]
          Length = 402

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ N LG+P+DG  D + K      I    P  +        F+TGI+V+D+  P   
Sbjct: 40  LGRIFNVLGEPVDGLGDVVAK--TKFPIHRNSPTFIELDTKLSIFETGIKVVDLLAPYRR 97

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 98  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 157

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +NL  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 158 ENLSSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSE 217

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 218 VSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPAPATT 275

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   E+   ++  +   + R++E 
Sbjct: 276 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYGTAQRVKQTLQRYKEL 334

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 335 QDIIAILG 342


>gi|22711896|ref|NP_683810.1| ATP synthase CF1 beta subunit [Chaetosphaeridium globosum]
 gi|23813703|sp|Q8SLY2|ATPB_CHAGL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|22416900|gb|AAM96500.1| CF1 beta subunit of ATP synthase [Chaetosphaeridium globosum]
          Length = 493

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G ++  + S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 105 LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 218

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 219 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 276

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 334

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 335 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 393

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 394 QRYKELQDIIAILG 407


>gi|332146793|dbj|BAK19948.1| ApH+ATPase beta subunit [Aphanothece halophytica]
          Length = 484

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D   ++   D    I   +P     +     F+TGI+VID+  P  
Sbjct: 95  ATLGRIFNVLGEPVDQKGAVNSDD-QFPIHRPIPQLTELETKPSIFETGIKVIDLIAPYR 153

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G + G+F G+G+GK+     L++  A++     V   +  ER RE  +   + +  N+ 
Sbjct: 154 RGGKTGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYSEMVESNVI 212

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF   G  +VLL +D+I RF  + 
Sbjct: 213 NAEDLTQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVGKQDVLLFVDNIFRFVQAG 272

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +++  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 273 MEVSALLGRMPSAVGYQPTLGTDMGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 330

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R++E
Sbjct: 331 TTFAHLDATTVLSRGLASKGIYPAVDPLDSSSTMLQPDIVGEEHYGTAREVQATLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|331268171|ref|YP_004347820.1| ATP synthase CF1 beta subunit [Chlorella variabilis]
 gi|325296348|gb|ADZ05068.1| ATP synthase CF1 beta subunit [Chlorella variabilis]
          Length = 481

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   D  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 98  GRIFNVLGEPVDNLGPVNNKD-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 217 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R+LA +G YP VDPL S S +       D+  +   ++   + R++E +DI
Sbjct: 335 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|320353386|ref|YP_004194725.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfobulbus propionicus
           DSM 2032]
 gi|320121888|gb|ADW17434.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfobulbus propionicus
           DSM 2032]
          Length = 503

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 178/394 (45%), Gaps = 16/394 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +Q      A LAE+    L   + GY+ ++ S    V  L         + H G      
Sbjct: 6   IQDMSRVFATLAEETRTALQATEVGYVVAVGSGIARVEGLPSVKSQELLLFHGGVPG--- 62

Query: 60  GQVIRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD 116
              I  N+D   I  + +GE   I+ G  V+  GR    P      GRVI+A G P+DG+
Sbjct: 63  ---IAFNIDPYEIGVILLGECANIAAGTKVYCTGRVVDIPVGDALLGRVISATGAPLDGE 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + +  + P  M+R  V    +TGI+VID   P+  GQR  +      GK+ 
Sbjct: 120 SGIEAVE-RLPVEQESPSIMDRAPVVTPLETGIKVIDALVPIGKGQRELILGDRQTGKTA 178

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           +   ++  +       +   +G+RG  V + I        +  +VV+VA  DESP L+ +
Sbjct: 179 IALDTIINQQGKNVLCVYCAIGQRGSAVAQLIASLRRHGAMAYTVVLVAGGDESPGLQFI 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP  A +IAEYF  +G +VL++ D +TR A + RE++      P    YP  +F    RL
Sbjct: 239 APYAATSIAEYFMRQGRDVLVVYDDLTRHARAYRELSLLLRRPPGREAYPGDIFYIHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  +     N  D I  ++ SI DG I L+    ++G  P V
Sbjct: 299 LERSTHLRPELGGGSLTAIPILETQAQNLADYIPTNLISITDGQIYLSPDFFQKGVLPAV 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D   SVSR+  K      + +   L     +FEE
Sbjct: 359 DVGKSVSRVGGKTQLPAYRAITGDLRLAYAQFEE 392


>gi|257852954|gb|ACV71488.1| ATP synthase beta subunit [Cyrillopsis paraensis]
          Length = 490

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+PID    LG  D  +   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPID---DLGPVDTRTTSPIHRAAPAFIQLDTKFSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              DN+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEDNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|110915610|gb|ABH02593.1| ATP synthase beta subunit [Catabrosa aquatica]
          Length = 458

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|119350509|gb|ABL63205.1| AtpB [Micractinium pusillum]
          Length = 392

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   D  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVNNKD-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 157

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 217

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 218 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R+LA +G YP VDPL S S +       D+  +   ++   + R++E +DI
Sbjct: 276 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 335

Query: 390 RLIGG 394
             I G
Sbjct: 336 IAILG 340


>gi|18077563|emb|CAC88851.1| atpD beta synthase chain [Pseudomonas marginalis]
          Length = 258

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++++V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSILAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|256831126|ref|YP_003159854.1| ATP synthase F1 subunit beta [Desulfomicrobium baculatum DSM 4028]
 gi|256580302|gb|ACU91438.1| ATP synthase F1, beta subunit [Desulfomicrobium baculatum DSM 4028]
          Length = 469

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 162/302 (53%), Gaps = 17/302 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158
           GR++N +G+P+D      KG +S E M  +    P    Q  + +  +TG++VID+  P 
Sbjct: 94  GRILNVVGRPVDE-----KGPISSEKMYPIHRPAPGFTEQSTKIEVLETGVKVIDLLVPF 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNL 214
             G ++G+F G+G+GK+ +L     +   +   IS+   VGER RE  +   + +    L
Sbjct: 149 PKGGKMGMFGGAGVGKTVILMEMINNIAKNHGGISVFAGVGERTREGNDLYHEMIEAGVL 208

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
            K+ +V    +E P  R    LTA+  AEYF   +  +VLL +D+I RF  +  E++   
Sbjct: 209 DKACLVYGQMNEPPGARSRVALTALAAAEYFRDEENQDVLLFVDNIFRFTQAGSEVSALL 268

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD
Sbjct: 269 GRMPSAVGYQPTLGTDLGELQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFSHLD 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           G IVL+R +AE G YP VDPL S SR+ D      D      ++  L+ ++++ +DI  I
Sbjct: 327 GTIVLSRQIAELGIYPAVDPLDSTSRILDPNVIGMDHYMTARAVQRLLQKYKDLQDIIAI 386

Query: 393 GG 394
            G
Sbjct: 387 LG 388


>gi|269123042|ref|YP_003305619.1| H(+)-transporting two-sector ATPase [Streptobacillus moniliformis
           DSM 12112]
 gi|268314368|gb|ACZ00742.1| H(+)-transporting two-sector ATPase [Streptobacillus moniliformis
           DSM 12112]
          Length = 459

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 166/328 (50%), Gaps = 21/328 (6%)

Query: 59  LGQVIRINLDI----VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           LG+V+ +N D     ++  P GI    S    V   GR  ++  S    GRV + LG+  
Sbjct: 41  LGKVLEVNEDKAVLQLFESPAGINMRDSK---VRFLGRPLKLRVSEDMIGRVFDGLGREK 97

Query: 114 D-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           D G   + +  L +  ++  P A  R    +  +TG+  ID    L  GQ++ +F+GSG+
Sbjct: 98  DNGPKIVAEKSLDINGLALNPVA--RDYPSEFIQTGVSAIDGLNTLVRGQKLPIFSGSGL 155

Query: 173 GKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224
             + L +  AR        + F  V+ + VG    E   FIED+     + ++V+ +  +
Sbjct: 156 PHAELAAQIARQARVLGDGEKF-AVVFAAVGITYEEAEFFIEDFKKTGAIDRAVLFINLA 214

Query: 225 DESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           ++  + R   P  A+T +EY +  KG NVL I+  +T +  ++REI+    E+P  RGYP
Sbjct: 215 NDPSVERIATPRMALTCSEYLAFEKGMNVLTIITDLTNYCEALREISAARKEVPGRRGYP 274

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
             ++++L  L ER G  + + G+IT +  + +  D+   PI D    I +G IVL+R L 
Sbjct: 275 GYLYTDLSTLYERAGKLKGKPGSITQIPILTMPEDDKTHPIPDLTGYITEGQIVLSRELY 334

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKK 371
           ++   PP+D L S+SRL DK    ++ +
Sbjct: 335 KKNIMPPIDVLPSLSRLKDKGIGKNKTR 362


>gi|46360663|gb|AAS89113.1| ATP synthase beta subunit [Fossombronia angulosa]
          Length = 382

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    D +  I    P           F+TGI+V+D+  P  
Sbjct: 2   SGRIFNVLGEPVD---NLGPVSSDTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 117

Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 118 DEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 177

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKRTLQRYK 294

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 295 ELQDIIAILG 304


>gi|21684879|emb|CAD11566.1| ATP synthase beta subunit [Chorizandra cymbaria]
          Length = 401

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S+   I    P  +        F+TGI+V+D+  P
Sbjct: 13  ATLGRIFNVLGEPVD---NLGPVDTSITFPIHRSAPAFVQLDTXLSIFETGIKVMDLLAP 69

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 70  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 128

Query: 213 -----NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 129 VINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 188

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP 
Sbjct: 189 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 246

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R+LA +G YP V PL S S +       +E  +    +   + R+
Sbjct: 247 PATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVGEEHYETAQKVKQTLQRY 306

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 307 KELQDIIAILG 317


>gi|28188335|gb|AAL92547.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 395

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDATITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|325478811|gb|EGC81921.1| ATP synthase ab C terminal domain protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 455

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 159/318 (50%), Gaps = 17/318 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+VI IN D  +V +     G  +    + F      +  S    GR  N LG+PID   
Sbjct: 42  GRVIEINKDRAMVQLFEGSTGINLKSTSVRFLGRPLELGVSEDMIGRAFNGLGEPIDDGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           S+    K D++   ++ V    +R    +  +TGI  ID    L  GQ++ +F+G+G+  
Sbjct: 102 SIIPEEKRDVNGTAINPV----SRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGNGLPH 157

Query: 175 STLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           + + +  AR       D    V+ + +G    E + F++D+     L +SV+ +  +D+ 
Sbjct: 158 NQVAAQIARQARVLSDDEGFAVVFAAIGITFEEAQFFMDDFRKTGALDRSVLFMNLADDP 217

Query: 228 PILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            I R   P  A+T AEY + + D  VL+I+  +T +A ++RE++    E+P  RGYP  +
Sbjct: 218 AIERLSTPKMALTAAEYLAFEKDMQVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  L ER G    + G IT +  + +  D+   PI D    I +G I+L+R L  +G
Sbjct: 278 YTDLSTLYERAGKLRGKPGTITQIPILSMPEDDITHPIPDLTGYITEGQIILDRGLYNQG 337

Query: 347 RYPPVDPLASVSRLADKA 364
             PPV  L S+SRL DK 
Sbjct: 338 VEPPVSILPSLSRLKDKG 355


>gi|4995221|emb|CAB44060.1| H(+)-transporting ATP synthase [Hibiscus punaluuensis]
          Length = 485

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 92  GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +   S+   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQSVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|15425574|emb|CAC60330.1| ATP synthase beta subunit [Echinops bannaticus]
          Length = 494

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDASTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E   +   +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDIAQEVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|11466709|ref|NP_039305.1| ATP synthase CF1 beta subunit [Marchantia polymorpha]
 gi|114552|sp|P06284|ATPB_MARPO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11679|emb|CAA28091.1| atpB [Marchantia polymorpha]
          Length = 492

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +++    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVEVTTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNILKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 220 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|323715458|gb|ADY04797.1| ATP synthase beta subunit [Broussaisia arguta]
          Length = 481

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 93  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 151

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E
Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 389

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 390 LQDIIAILG 398


>gi|113910960|gb|ABI48212.1| ATPase beta subunit [Abies homolepis]
          Length = 472

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDASTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AE+F    + +VLL +D+I RF 
Sbjct: 198 GVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEHFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   V +R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 316 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQ 374

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 375 RYKELQDIIAI----PGLD 389


>gi|4995097|emb|CAB44016.1| H(+)-transporting ATP synthase [Durio zibethinus]
          Length = 483

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|306773448|emb|CBJ55300.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           polypoda]
          Length = 383

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 163/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|269798933|gb|ACZ43766.1| ATP synthase beta subunit [Corchoropsis crenata]
          Length = 470

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 200

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 201 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 258

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 259 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 316

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 317 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 376

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 377 QRYKELQDIIAILG 390


>gi|269798929|gb|ACZ43764.1| ATP synthase beta subunit [Corchoropsis crenata]
          Length = 470

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 201

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 202 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 259

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 260 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 317

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 318 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 377

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 378 QRYKELQDIIAILG 391


>gi|150035721|gb|ABR67206.1| ATP synthase beta subunit [Danthonia californica]
          Length = 412

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 19  GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLAIFETGIKVVDLLA 75

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 76  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 135

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 136 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 195

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 196 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 253

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 254 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYDTAQRVKETLQRY 313

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 314 KELQDIIAILG 324


>gi|110915588|gb|ABH02582.1| ATP synthase beta subunit [Avenella flexuosa]
          Length = 470

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 77  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 133

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 134 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 193

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 194 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 253

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 254 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 311

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 312 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 371

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 372 ELQDIIAILG 381


>gi|293977763|ref|YP_003543193.1| F1 ATP synthase subunit beta [Candidatus Sulcia muelleri DMIN]
 gi|292667694|gb|ADE35329.1| ATP synthase, F1 beta subunit [Candidatus Sulcia muelleri DMIN]
          Length = 496

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 183/371 (49%), Gaps = 46/371 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GRV N +G  IDG   LG  + S  I + + PP             TGI+VID+  P   
Sbjct: 93  GRVFNVVGNTIDG---LGNLNNSKRISIHRNPPKFEDLSTNIDILYTGIKVIDLVEPYIK 149

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VRE--------- 204
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE         
Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 209

Query: 205 ---FIEDYLG----------DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
              F+ED             + LK  K+  V    +E P  R    L+ +T+AEY+   K
Sbjct: 210 GDSFLEDMKNGKWDISKVDKNELKNSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDRK 269

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + G+IT
Sbjct: 270 GRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGSIT 327

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V +  D+ +DP   +  S LD   VL+R ++  G YP VDPL+S SR+    +  +
Sbjct: 328 SIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSIEFIGN 387

Query: 369 EKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSPSDLSS 426
           +  L +  +  ++ R++E +DI  I G     +   DK  VH+   +  FL Q P +++ 
Sbjct: 388 DHYLCAQRVKQILQRYQELQDIIAILGIEELSE--EDKIIVHRARRVQRFLSQ-PFNVAE 444

Query: 427 EDVFQEITKKL 437
           +  F  IT KL
Sbjct: 445 Q--FTGITGKL 453


>gi|291537270|emb|CBL10382.1| Archaeal/vacuolar-type H+-ATPase subunit B [Roseburia intestinalis
           M50/1]
          Length = 458

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 26/362 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCG 103
           +V +GK    LG+++ IN D   +      EE+SL  L  H  R    P     S    G
Sbjct: 32  LVVEGKQK-KLGRIVEINNDYAVVQVFESTEEMSL--LNTH-ARLTGRPLCVGLSEEILG 87

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R  N LG+PIDG  ++   ++  ++  +     +R+      +TGI  ID  T L  GQ+
Sbjct: 88  RTFNGLGQPIDGLGAV-HAEVVRDVNGQPMNPCSREYPRNYIRTGISAIDGLTTLIRGQK 146

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL 214
           + +F+G+G+    L +                   V+ + +G +      F   +    +
Sbjct: 147 LPIFSGNGLPHDELAAQIVEQASLGDGENEDEPFAVVFAAMGVKYDVAEYFKRRFAECGV 206

Query: 215 KKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272
              V +       P+  ++  P  A+T AEY +  K  ++L+IL  +T FA ++RE++  
Sbjct: 207 SDHVAMFLNLSNDPVAERLITPKVALTAAEYLAFEKNMHILVILTDMTSFAEAMREVSAQ 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE+P  +GYP  ++SE   L ER G      G++T +  + +  D+   PI D    I 
Sbjct: 267 KGEIPSRKGYPGYLYSEFAALYERAGIVNGASGSVTQIPILTMPNDDITHPIPDLTGYIT 326

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETR 387
           +G IVL RSL ++  YPP++ L S+SRL      +K    D + L + L     R  E R
Sbjct: 327 EGQIVLERSLHQKNIYPPINVLPSLSRLMKDGIGEKYTREDHQDLANQLFSSYARVGEAR 386

Query: 388 DI 389
           D+
Sbjct: 387 DL 388


>gi|21633365|gb|AAM52157.1| ATP synthase beta subunit [Evolvulus glomeratus]
 gi|21633367|gb|AAM52158.1| ATP synthase beta subunit [Evolvulus nuttallianus]
          Length = 490

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGKPVD---NLGPVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708544|emb|CAB89969.1| ATP synthase beta subunit [Plagiopteron suaveolens]
          Length = 487

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|21684909|emb|CAD11581.1| ATP synthase beta subunit [Pharus parvifolius]
          Length = 481

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 215 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRVVGNEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|270313033|gb|ACZ73598.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 476

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|291546409|emb|CBL19517.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus sp. SR1/5]
          Length = 460

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 159/325 (48%), Gaps = 20/325 (6%)

Query: 51  HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVI 106
           H    +  +G+++ I  D   I      + +SLG+    L  H     +SP     GR  
Sbjct: 33  HMEDGTQKIGRIVEIYEDKAVIQVFEGTDNMSLGNTHTRLTGHPMEIGLSPE--ILGRTF 90

Query: 107 NALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           N +G+PIDG   LG+   ++S+ I       + R+       TGI  ID  T L  GQ++
Sbjct: 91  NGIGQPIDG---LGEITPEVSLNINGLPLNPVTREYPRNYINTGISAIDGLTTLIRGQKL 147

Query: 165 GVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
            +F+G+G+    L        S+ A SD    ++ + +G +      F   +        
Sbjct: 148 PIFSGNGLPHDKLAAQIVQQASLGADSDEKFAIVFAAMGVKYDVAEFFRRTFEESGASDH 207

Query: 218 VVVVATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGE 275
           VV+       P++ R + P  A+T AEY +  KG ++L+IL  IT F  ++RE++++ GE
Sbjct: 208 VVMFLNLANDPVVERLLTPKIALTAAEYLAFEKGMHILVILTDITSFCEAMREVSSSKGE 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P  +GYP  ++SEL  L ER G      G++T +  + +  D+   PI D    I +G 
Sbjct: 268 IPSRKGYPGYLYSELATLYERAGIVRGGTGSVTQIPILTMPNDDITHPIPDLTGYITEGQ 327

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL 360
           IVL+R L  +  YPP++ L S+SRL
Sbjct: 328 IVLDRQLHGQAIYPPINVLPSLSRL 352


>gi|6687662|emb|CAB65035.1| ATP synthase beta subunit [Helianthus annuus]
          Length = 498

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 339 PVTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|5758908|gb|AAD50882.1| ATP synthase beta subunit [Riedelia aff. wrayii SBG 83-203]
          Length = 496

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    I       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSIPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|329116554|ref|ZP_08245271.1| ATP synthase ab C terminal domain protein [Streptococcus parauberis
           NCFD 2020]
 gi|326906959|gb|EGE53873.1| ATP synthase ab C terminal domain protein [Streptococcus parauberis
           NCFD 2020]
          Length = 459

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 168/336 (50%), Gaps = 17/336 (5%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L +  +H G+     GQV+ ++ D  +V +     G  ++   + F      ++ S
Sbjct: 27  HYNELVEISMHDGQKRQ--GQVLEVHEDKAMVQLFEGSSGINLAKTKVRFTGHPLEVAVS 84

Query: 99  ACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
               GR+ + +GKPIDG  D L +  L ++  +  P A  R   ++  +TGI  ID    
Sbjct: 85  EDMIGRIFDGMGKPIDGGPDLLPEKYLDIDGQAINPVA--RDYPDEFIQTGISAIDHLNT 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYL 210
           L  GQ++ VF+GSG+  + L +  AR        D F  V+ + +G    E   F+ D  
Sbjct: 143 LVRGQKLPVFSGSGLPHNELAAQIARQATVLNADDNF-AVVFAAMGITFEEAEFFMNDLR 201

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               + +SV+ +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE
Sbjct: 202 ETGAIDRSVLFMNLANDPAIERIATPRIALTTAEYLAYEKDMHVLVIMTDMTNYCEALRE 261

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+    E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D  
Sbjct: 262 ISAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLT 321

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             I +G I+L+  L   G  PP++ L S+SRL DK 
Sbjct: 322 GYITEGQIILSHELYNSGFRPPINILPSLSRLKDKG 357


>gi|189462119|ref|ZP_03010904.1| hypothetical protein BACCOP_02799 [Bacteroides coprocola DSM 17136]
 gi|189431200|gb|EDV00185.1| hypothetical protein BACCOP_02799 [Bacteroides coprocola DSM 17136]
          Length = 508

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N +G+ IDG   L K      I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 95  GRVMNVVGETIDGMKELDKTG-GFPIHREPPKFEDLATTQEVLFTGIKVIDLLEPYLKGG 153

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 154 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 211

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248
           GD   KS+                     +V    +E P  R+   L+ +T+AE F  + 
Sbjct: 212 GDEFLKSMEEGNWDLSKVDYSEVEKSQVAMVFGQMNEPPGARQSVALSGLTLAESFRDRQ 271

Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            G+N    +L  +D+I RF  +  E++   G +P A GY  ++ +E+ ++ ERI  +  +
Sbjct: 272 TGENGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 329

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 389

Query: 364 AW-SADEKKLVSSLTHLIHRFEETRDI 389
                D  +    +  ++ R +E +DI
Sbjct: 390 LIVGKDHYETAQRVKQILQRNKELQDI 416


>gi|110915590|gb|ABH02583.1| ATP synthase beta subunit [Helictotrichon hookeri]
          Length = 477

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 200 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 318 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|24298790|dbj|BAC22105.1| F-ATPase beta-subunit [Thermotoga neapolitana]
          Length = 468

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 173/327 (52%), Gaps = 16/327 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K      I    P  + +    +  +TGI+VID+  P   G
Sbjct: 90  LGRILNVIGEPVDEAGEI-KSKERWPIHRPAPELIEQSTEIEILETGIKVIDLLAPFPKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG F G+G+GK+ L+    R+   +    S+   VGER RE  E ++E      L  +
Sbjct: 149 GKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVLGNT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++V    +E P  R    LTA+TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 ILVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +   +G+IT+V ++ V  D+  DP   +  + LD  +
Sbjct: 269 PSAVGYQPTLATDMGELQERI--TSTRRGSITSVQAIYVPADDITDPAPATTFAHLDATV 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R +AE G YP VDPL S S++ D A    E  ++   +  ++ R+++ +DI  I G 
Sbjct: 327 VLSRRIAELGLYPAVDPLDSSSKILDPAVVGREHYEVARGVQEVLQRYKDLQDIIAILGV 386

Query: 396 R---PGVDLILDKAVHQVPIIYDFLKQ 419
           +   P   L+    VH+   I  FL Q
Sbjct: 387 KELSPEDKLV----VHRARRIQRFLSQ 409


>gi|119350441|gb|ABL63171.1| AtpB [Actinastrum hantzschii]
          Length = 392

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   +  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVNNNE-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 157

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 158 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 218 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R+LA +G YP VDPL S S +       D+  +   ++   + R++E +DI
Sbjct: 276 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 335

Query: 390 RLIGG 394
             I G
Sbjct: 336 IAILG 340


>gi|118918091|dbj|BAF40435.1| ATP synthase beta subunit [Euphronia guianensis]
          Length = 488

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 154/307 (50%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 210

Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +    NL +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 211 RVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 270

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G LP A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 271 QAGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 328

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L          K    +  ++ R
Sbjct: 329 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPDIVGKKHYKTAQRVKQILQR 388

Query: 383 FEETRDI 389
           ++E +D+
Sbjct: 389 YKELQDV 395


>gi|113910838|gb|ABI48151.1| ATPase beta subunit [Andreaea rothii]
          Length = 456

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 162/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V      ER RE      E  E  
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGXG-ERTREGNDLYMEMKESK 182

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 183 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLGTEMGTSQERI--TSTKEGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 359

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 360 YKELQDIIAILG 371


>gi|20384957|gb|AAM19145.1| ATP synthase beta subunit [Nitella praelonga]
          Length = 402

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVNTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            DN+ +S V  V    +E P  R    LTA+T+AEY       +VLL +D+I RF  +  
Sbjct: 157 EDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYLRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|14718015|gb|AAK72749.1| ATP synthase beta subunit [Coccoloba uvifera]
          Length = 469

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 86  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 143 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 202

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 203 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 262

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 263 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 320

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+LA +G YP VDPL S S +       +E  K    +   + R++
Sbjct: 321 ATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQRVKQTLQRYK 380

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 381 ELQDIIAILG 390


>gi|295065735|ref|YP_003587675.1| ATP synthase CF1 beta subunit [Anomochloa marantoidea]
 gi|251765259|gb|ACT15413.1| ATP synthase CF1 beta subunit [Anomochloa marantoidea]
          Length = 498

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N ++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|184127855|gb|ACC67827.1| ATP synthase beta chain [Marattia salicina]
          Length = 399

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 128

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 189 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 306 LQDIIAILG 314


>gi|110915690|gb|ABH02633.1| ATP synthase beta subunit [Puccinellia distans]
          Length = 471

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASXKKGSITSIQAVYVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDAXTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|56236590|gb|AAV84662.1| ATP synthase beta subunit [Juniperus communis]
          Length = 421

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 35  TTLGRIFNVLGEPVD---NLGPVDALTRSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 150

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 151 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   ++  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEQHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|231597|sp|P30158|ATPB_DICDH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11474|emb|CAA47370.1| atpB [Dictyota dichotoma]
          Length = 481

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+ +D +  +G G+  + I    P   + +     F+TGI+V+D+  P  
Sbjct: 94  ATLGRIFNVLGQTVD-NIEIGTGEDRLPIHRPAPSFTDLETKPAIFETGIKVVDLLAPYR 152

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 153 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 212

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 213 ESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINRQDVLLFIDNIFRFVQAGS 272

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 273 EVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPAT 330

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        E    + L    + R++E 
Sbjct: 331 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPVIVGSEHYDTAQLVKKTLQRYKEL 390

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 391 QDIIAILG 398


>gi|305671629|gb|ADM63124.1| ATP synthase beta subunit [Morina longifolia]
          Length = 437

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 169

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 170 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 229

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 230 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 287

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +   +    +   + R
Sbjct: 288 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGNNHYETAQRVKQTLQR 347

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 348 YKELQDIIAILG 359


>gi|224178028|ref|YP_002600926.1| CF1 beta subunit of ATP synthase [Pyramimonas parkeae]
 gi|215882695|gb|ACJ71068.1| CF1 beta subunit of ATP synthase [Pyramimonas parkeae]
          Length = 488

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   ++++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 103 LGRIFNVLGEPVDEMGPVAN-EMTLPIHREAPAFVDLDTKLAIFETGIKVVDLLAPYRRG 161

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V+ 
Sbjct: 162 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVIN 219

Query: 222 ATS-------------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
           A               +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 220 ANKLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGS 279

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 280 EVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKNGSITSIQAVYVPADDLTDPAPAT 337

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       DE       +   + R++E 
Sbjct: 338 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWILGDEHYDTAQGVKKTLQRYKEL 397

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 398 QDIIAILG 405


>gi|149798637|gb|ABR32009.1| ATP synthase beta chain [Acrostichum danaeifolium]
          Length = 426

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S +  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQNSTKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+RSLA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRSLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|14717960|gb|AAK72722.1| ATP synthase beta subunit [Bauhinia sp. Doyle s.n.]
          Length = 470

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  K    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6688901|emb|CAB65316.1| ATP synthase beta subunit [Olea europaea]
 gi|6688960|emb|CAB65348.1| ATP synthase beta subunit [Phyla lanceolata]
          Length = 497

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|305671693|gb|ADM63156.1| ATP synthase beta subunit [Symphoricarpos sp. Donoghue & Winkworth
           28]
          Length = 489

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 42  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 217

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E+
Sbjct: 218 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +D
Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGQNHYETAQRVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|270313041|gb|ACZ73602.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 465

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|159227604|emb|CAJ80593.1| ATP synthase beta subunit [Nicandra physalodes]
          Length = 343

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 156/305 (51%), Gaps = 20/305 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  P
Sbjct: 42  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAP 98

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 99  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 158

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 159 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 218

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 219 GSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 276

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 277 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 336

Query: 385 ETRDI 389
           E +DI
Sbjct: 337 ELQDI 341


>gi|113910836|gb|ABI48150.1| ATPase beta subunit [Sphagnum capillifolium]
          Length = 472

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDAGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|164566061|gb|ABY61173.1| ATP synthase beta subunit [Danaea bipinnata]
 gi|164566131|gb|ABY61208.1| ATP synthase beta subunit [Danaea polymorpha]
          Length = 394

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|163790831|ref|ZP_02185256.1| V-type ATP synthase subunit B [Carnobacterium sp. AT7]
 gi|159873899|gb|EDP67978.1| V-type ATP synthase subunit B [Carnobacterium sp. AT7]
          Length = 458

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDL-VFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I+ D   +        I+L D  V   GR   +  S    GRV + +G+  D   
Sbjct: 42  GQVLEIDGDKAMVQIFEGSSGINLKDTKVRFLGRPLSLDVSEDMVGRVFDGMGRVNDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   + +++I  +    M R   ++  +TGI  ID    L  GQ++ VF+GSG+    L
Sbjct: 102 ELIP-EKTLDINGEAINPMARDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHKEL 160

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR      SD    V+ + +G    E   F+ED+     + +SV+ +  +D+  I 
Sbjct: 161 AAQIARQATVKNSDEKFAVVFAAIGITFEEAEFFMEDFRKTGAIDRSVMFINLADDPAIE 220

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D +VL+I+  +T +  ++REI+    E+P  RGYP  +++ 
Sbjct: 221 RIATPKMALTAAEYLAYEKDMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G     KG++T +  + +  D+   PI D    I +G ++L+R L   G  P
Sbjct: 281 LATLYERAGRLVGGKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQLILSRELYNSGVQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+D L S+SRL DK 
Sbjct: 341 PIDVLPSLSRLKDKG 355


>gi|21633301|gb|AAM52125.1| ATP synthase beta subunit [Merremia aegyptia]
          Length = 490

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|283798589|ref|ZP_06347742.1| V-type sodium ATPase, B subunit [Clostridium sp. M62/1]
 gi|291073673|gb|EFE11037.1| V-type sodium ATPase, B subunit [Clostridium sp. M62/1]
 gi|295090622|emb|CBK76729.1| Archaeal/vacuolar-type H+-ATPase subunit B [Clostridium cf.
           saccharolyticum K10]
 gi|295115704|emb|CBL36551.1| Archaeal/vacuolar-type H+-ATPase subunit B [butyrate-producing
           bacterium SM4/1]
          Length = 457

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 28/329 (8%)

Query: 98  SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           S    GRV + LG+PIDG      D+      L M   ++  P       ++  +TG+  
Sbjct: 82  SEDMLGRVFDGLGRPIDGGPEILPDERRDINGLPMNPAARSYP-------QEFIQTGVSA 134

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205
           ID    L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F
Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDEQFAVVFAAMGITFEESHFF 194

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263
            E +     + ++V+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A
Sbjct: 195 TESFKETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKNMHVLVILTDITNYA 254

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++REI+    E+P  RGYP  ++++L  + ER G    + G+IT +  + +  D+   P
Sbjct: 255 DALREISAARKEVPGRRGYPGYMYTDLASIYERAGRQNGKTGSITMIPILTMPEDDKTHP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTH 378
           I D    I +G I+L+R L  +G  PP+D L S+SRL DK        AD    ++ L  
Sbjct: 315 IPDLTGYITEGQIILSRELYRKGVMPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFA 374

Query: 379 LIHRFEETRDIRLIGGYRP--GVDLILDK 405
              R +E +++ +I G      VDLI  K
Sbjct: 375 AYARGKEAKELMVILGEAALSDVDLIYAK 403


>gi|110915576|gb|ABH02576.1| ATP synthase beta subunit [Alopecurus textilis]
          Length = 472

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|6017814|gb|AAF01641.1| ATP synthase beta subunit [Nelumbo lutea]
 gi|33327755|gb|AAQ09241.1| ATP synthase beta subunit [Nelumbo lutea]
 gi|194267387|gb|ACF35679.1| ATP synthase beta subunit [Nelumbo lutea]
          Length = 491

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D L+   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|300709755|ref|YP_003735569.1| V-type ATP synthase subunit B [Halalkalicoccus jeotgali B3]
 gi|299123438|gb|ADJ13777.1| V-type ATP synthase subunit B [Halalkalicoccus jeotgali B3]
          Length = 496

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 42/299 (14%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPL 158
            GRV++  G PIDG    G   +  E    V  A+N   R+  E+  +TG+  ID    L
Sbjct: 84  LGRVLDGSGNPIDG----GPEIVPEERQDIVGAAINPYAREYPEEFIQTGVSSIDGMNTL 139

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARS----------DCFDK------------------- 189
             GQ++ +F+ SG+  + L    AR           +  D+                   
Sbjct: 140 VRGQKLPIFSASGLPHNDLALQIARQATVPEESAEDEATDEPGSEEADDGELGEGADDEG 199

Query: 190 ----VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
               VI   +G    E  EFI+D+     L++SVV +  +D+  + R++ P  A+T AEY
Sbjct: 200 SEFAVIFGAMGITAEEANEFIDDFERTGALERSVVFMNLADDPAVERQVTPRLALTTAEY 259

Query: 245 FS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            +  KG +VL+IL  +T +  ++REI     E+P  RGYP  ++++L +L ER G  +  
Sbjct: 260 LAFEKGYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIKGR 319

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +G++T +  + + GD+   PI D    I +G IV++R L  +G  PPVD L S+SRL D
Sbjct: 320 EGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIVMDRDLNSQGIEPPVDVLPSLSRLMD 378


>gi|219552182|gb|ACL26806.1| ATP synthase beta chain [Glochidion lanceolatum]
 gi|219552186|gb|ACL26808.1| ATP synthase beta chain [Glochidion zeylanicum]
          Length = 423

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D  ++  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|149384650|gb|ABR25136.1| ATP synthase beta chain [Polyphlebium borbonicum]
          Length = 385

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 157/306 (51%), Gaps = 22/306 (7%)

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S+   I    P +         F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVDTSITFPIHRSAPASTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 58  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQN 117

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 177

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 178 ALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSA 235

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQD 294

Query: 389 IRLIGG 394
           I  I G
Sbjct: 295 IIAILG 300


>gi|7708454|emb|CAB89918.1| ATP synthase beta subunit [Jasminum polyanthum]
          Length = 473

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  K+   +   + R+
Sbjct: 320 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|71277382|gb|AAZ29871.1| ATP synthase beta subunit [Nitella axilliformis]
 gi|71277384|gb|AAZ29872.1| ATP synthase beta subunit [Nitella axilliformis]
          Length = 348

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +    I    P   +       F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTDLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 85  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|110915664|gb|ABH02620.1| ATP synthase beta subunit [Lolium perenne]
 gi|110915666|gb|ABH02621.1| ATP synthase beta subunit [Lolium rigidum]
          Length = 472

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 79  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 196 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 255

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 256 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 313

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 314 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 373

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 374 ELQDIIAILG 383


>gi|110915628|gb|ABH02602.1| ATP synthase beta subunit [Dielsiochloa floribunda]
          Length = 475

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 198 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|110915640|gb|ABH02608.1| ATP synthase beta subunit [Hookerochloa eriopoda]
          Length = 471

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|119350469|gb|ABL63185.1| AtpB [Pseudochlorella sp. CCAP 211/1A]
          Length = 392

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D    + I    P  ++       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGEPVD---NLGPVDAKEGLPIHRSAPLFVDLDTKLSIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 155

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           DN+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 156 DNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 215

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R++E 
Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKETLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|113910822|gb|ABI48143.1| ATPase beta subunit [Fossombronia pusilla]
          Length = 472

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 158/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    D    I    P           F+TGI+V+D+  P  
Sbjct: 85  LGRIFNVLGEPVD---NLGPVSSDTMFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 141

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 142 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 200

Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 201 DEQNISQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 260

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 261 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 319 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 377

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 378 ELQDIIAILG 387


>gi|68445583|dbj|BAE03291.1| membrane-associated ATPase beta chain [Candidatus Caldiarchaeum
           subterraneum]
          Length = 466

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 16/282 (5%)

Query: 91  GRFRISP-SACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           GR   +P S    GRV + LG+PIDG  D + +  L +      P    R+      +TG
Sbjct: 80  GRTMETPVSTEMLGRVFDGLGRPIDGLPDPIAEDVLDVNGEPINPE--QREYPSDFIQTG 137

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV 202
           I  ID    L  GQ++ +F+G+G+  + L +  AR            VI + VG +  E 
Sbjct: 138 ISAIDGMNSLVRGQKLPIFSGAGLPHNMLAAQIARQATVPGKEEEFAVIFAAVGVQNDEA 197

Query: 203 REF---IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
           R F   +E+     +K+S + +  +D+  I R + P  A+T+AEY + K G +VL+I+  
Sbjct: 198 RYFRRSLEE--SGAIKRSALFLNLADDPAIERIVTPRIALTLAEYLAFKQGYHVLVIITD 255

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           IT +A ++RE++    E+P  +GYP  ++++L  L ER G  +  KG++T +  + +  D
Sbjct: 256 ITNYAEALREVSAAREEVPGRKGYPGYMYTDLASLYERAGRIKGLKGSLTQMPILSMPSD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   PI D    I +G IVL+R L  +G YPP++ L S+SRL
Sbjct: 316 DITHPIPDLTGYITEGQIVLSRDLYRKGIYPPINVLMSLSRL 357


>gi|169142694|ref|YP_001687121.1| ATP synthase beta subunit [Oenothera argillicola]
 gi|190358690|sp|B0Z4L0|ATPB_OENAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|159792932|gb|ABW98688.1| ATP synthase beta subunit [Oenothera argillicola]
          Length = 498

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 151/306 (49%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDEHYETAQRVKETLQRY 398

Query: 384 EETRDI 389
           +E +DI
Sbjct: 399 KELQDI 404


>gi|55056896|emb|CAF21949.1| ATP synthase beta subunit [Juniperus chinensis]
          Length = 439

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSACWCGR 104
           KN+D  GQ I +  ++  +        +++           ++   G   +       GR
Sbjct: 15  KNNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 74

Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D L+   + +  PA  +  ++    +TGI+V+D+  P   G 
Sbjct: 75  IFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDIKFSILETGIKVVDLLAPYRRGG 131

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 132 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 190

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 191 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 250

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 251 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 308

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +   +    E  +    +   + R++E +D
Sbjct: 309 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGKEHYETAQGVKQTLQRYKELQD 368

Query: 389 IRLIGG 394
           I  I G
Sbjct: 369 IIAILG 374


>gi|149798711|gb|ABR32046.1| ATP synthase beta chain [Onychium japonicum]
          Length = 426

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +++  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNNITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|37544933|gb|AAN07065.1| ATP synthase beta subunit [Trimenia moorei]
          Length = 427

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 34  GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLLIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 150

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 151 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGTDHYETAQRIKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|164566069|gb|ABY61177.1| ATP synthase beta subunit [Danaea crispa]
          Length = 394

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V   +  DP   + 
Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPAXDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|21684917|emb|CAD11585.1| ATP synthase beta subunit [Prionium palmita]
          Length = 406

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 14  ATLGRIFNVLGEPVD---NLGAVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 70

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 71  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 130

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 131 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 190

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP  
Sbjct: 191 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 248

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +        E  +    +   + R++
Sbjct: 249 ATTFAHLDATTVLSRPLAAKGIYPAVDPLDSTSTMLQPGIVGKEHYETAQRVKQTLQRYK 308

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 309 ELQDIIAILG 318


>gi|6689231|emb|CAB65406.1| ATP synthase beta subunit [Scrophularia californica]
          Length = 498

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718165|gb|AAK72821.1| ATP synthase beta subunit [Pedicularis coronata]
          Length = 496

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|307931034|dbj|BAJ21378.1| ATP synthase CF1 beta subunit [Pterosperma cristatum]
          Length = 394

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 160/312 (51%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID    +G  D +  + I    P  ++       F+TGI+V+D+  P  
Sbjct: 69  LGRIFNVLGQPID---EMGSVDYTKTLPIHRLAPEFIDLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +           
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 184

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            +  LGD+  K  +V    +E P  R    LTA+T+AE+F      +VLL +D+I RF  
Sbjct: 185 NDQNLGDS--KVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNNQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKTGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHR 382
             +  + LD   VL+R+LA +G YP VDPL S S +  + W   E+   +   +   + R
Sbjct: 301 PATTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTML-QPWIVGEEHYGVAQGVKKTLQR 359

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 360 YKELQDIIAILG 371


>gi|303237321|ref|ZP_07323891.1| ATP synthase F1, beta subunit [Prevotella disiens FB035-09AN]
 gi|302482708|gb|EFL45733.1| ATP synthase F1, beta subunit [Prevotella disiens FB035-09AN]
          Length = 508

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 155/330 (46%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +GKPIDG + L   + +  I  + P        ++   TGI+VID+  P   G 
Sbjct: 95  GRMMNVIGKPIDGMEELHM-EGAYPIHREAPKFDELSTQKEMLATGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212
           +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L       G+
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213

Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             +K++                     +V    +E P  R    L+ +T+AE F   G  
Sbjct: 214 KFRKAMDEGKWDLSLIDKEEIKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273

Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +KG
Sbjct: 274 DGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKKG 331

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ D   
Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLV 391

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
              E       +  L+  + E +DI  I G
Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421


>gi|110915672|gb|ABH02624.1| ATP synthase beta subunit [Molineriella laevis]
          Length = 475

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 198 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|110915674|gb|ABH02625.1| ATP synthase beta subunit [Parafestuca albida]
          Length = 473

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 80  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 137 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 196

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 197 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 315 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 374

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 375 ELQDIIAILG 384


>gi|110915594|gb|ABH02585.1| ATP synthase beta subunit [Bellardiochloa variegata]
          Length = 475

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 198 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|110915586|gb|ABH02581.1| ATP synthase beta subunit [Avena sativa]
          Length = 474

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 197 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 315 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|42559022|gb|AAS20197.1| ATP synthase beta subunit [Elegia fenestrata]
          Length = 478

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  ++       F+TGI+V+D+  P
Sbjct: 91  ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 147

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 148 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 207

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 208 INEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQA 267

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +K +IT++ +V V  D+  DP  
Sbjct: 268 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTDPAP 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 326 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRYK 385

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 386 ELQDIIAILG 395


>gi|212896644|gb|ACJ38525.1| membrane-bound ATP synthase subunit B [Lespedeza frutescens]
          Length = 469

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|164566087|gb|ABY61186.1| ATP synthase beta subunit [Danaea geniculata]
          Length = 394

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|110915656|gb|ABH02616.1| ATP synthase beta subunit [Holcus annuus]
 gi|110915678|gb|ABH02627.1| ATP synthase beta subunit [Phleum pratense]
          Length = 476

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 318 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 377

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 378 ELQDIIAILG 387


>gi|110915582|gb|ABH02579.1| ATP synthase beta subunit [Anthoxanthum odoratum]
          Length = 490

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915648|gb|ABH02612.1| ATP synthase beta subunit [Graphephorum wolfii]
          Length = 474

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 197 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 315 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|110915660|gb|ABH02618.1| ATP synthase beta subunit [Leucopoa kingii]
          Length = 474

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 81  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 197

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 198 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 257

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 258 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 315

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 316 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 375

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 376 ELQDIIAILG 385


>gi|119350473|gb|ABL63187.1| AtpB [Chlorella sorokiniana]
          Length = 389

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   D  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 36  GRIFNVLGEPVDNLGPVNTKD-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 94

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 95  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 154

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 155 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 214

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 215 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 272

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R+LA +G YP VDPL S S +       D+  +   ++   + R++E +DI
Sbjct: 273 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 332

Query: 390 RLIGG 394
             I G
Sbjct: 333 IAILG 337


>gi|149384661|gb|ABR25139.1| ATP synthase beta chain [Lindsaea quadrangularis]
          Length = 426

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAISG 341


>gi|110915598|gb|ABH02587.1| ATP synthase beta subunit [Briza minor]
          Length = 490

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118411134|ref|YP_874528.1| ATP synthase CF1 beta chain [Thalassiosira pseudonana]
 gi|224015776|ref|XP_002297536.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|125987721|sp|A0T0R6|ATPB_THAPS RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|116739881|gb|ABK20751.1| ATP synthase CF1 beta chain [Thalassiosira pseudonana]
 gi|220967800|gb|EED86176.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 474

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N +G+P+D  GD  +   D ++ I    P     +     F+TGI+V+D+  P  
Sbjct: 90  LGRIFNVIGEPVDEQGDVVV---DQTLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYR 146

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  E+     + 
Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 205

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 206 NSSNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R+LA +G YP VDPL S S +      ++   +   ++   + R++E
Sbjct: 324 TTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVSEVHYETAETVKETLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|20467387|gb|AAL27824.1| ATPase beta subunit [Ephedra equisetina]
          Length = 458

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 82  LGRIFNVLGEPVD---NLGPIDTSTTFXIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         +   VGER RE  +   +     +  
Sbjct: 139 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 198

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    L A+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 199 EKNIIESKVALVYGQMNEPPGARMRVGLPALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 259 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 316

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 317 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSAMLQPRIVGEKHYEIAQEVKQTLQRYKEL 376

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 377 QDIIAILG 384


>gi|14017579|ref|NP_114266.1| ATP synthase CF1 beta subunit [Triticum aestivum]
 gi|114574|sp|P20858|ATPB_WHEAT RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|473690|gb|AAA84726.1| ATP synthase beta subunit [Triticum aestivum]
 gi|13928212|dbj|BAB47041.1| ATPase beta subunit [Triticum aestivum]
          Length = 498

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|323715470|gb|ADY04803.1| ATP synthase beta subunit [Dichroa febrifuga]
          Length = 479

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 91  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 209

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 210 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 269

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 270 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 327

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E
Sbjct: 328 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 387

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 388 LQDIIAILG 396


>gi|315427405|dbj|BAJ49013.1| V-type H+-transporting ATPase subunit B [Candidatus Caldiarchaeum
           subterraneum]
          Length = 465

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 16/282 (5%)

Query: 91  GRFRISP-SACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           GR   +P S    GRV + LG+PIDG  D + +  L +      P    R+      +TG
Sbjct: 79  GRTMETPVSTEMLGRVFDGLGRPIDGLPDPIAEDVLDVNGEPINPE--QREYPSDFIQTG 136

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV 202
           I  ID    L  GQ++ +F+G+G+  + L +  AR            VI + VG +  E 
Sbjct: 137 ISAIDGMNSLVRGQKLPIFSGAGLPHNMLAAQIARQATVPGKEEEFAVIFAAVGVQNDEA 196

Query: 203 REF---IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
           R F   +E+     +K+S + +  +D+  I R + P  A+T+AEY + K G +VL+I+  
Sbjct: 197 RYFRRSLEE--SGAIKRSALFLNLADDPAIERIVTPRIALTLAEYLAFKQGYHVLVIITD 254

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           IT +A ++RE++    E+P  +GYP  ++++L  L ER G  +  KG++T +  + +  D
Sbjct: 255 ITNYAEALREVSAAREEVPGRKGYPGYMYTDLASLYERAGRIKGLKGSLTQMPILSMPSD 314

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   PI D    I +G IVL+R L  +G YPP++ L S+SRL
Sbjct: 315 DITHPIPDLTGYITEGQIVLSRDLYRKGIYPPINVLMSLSRL 356


>gi|257853488|gb|ACV71746.1| ATP synthase beta subunit [Dissiliaria muelleri]
          Length = 489

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHGGVSVFGGVGERTREGNDLYKEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +        E  +   S+   + R+
Sbjct: 331 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQPNIVGTEHYETAQSVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|242399766|ref|YP_002995191.1| A1A0 ATP synthase, subunit B [Thermococcus sibiricus MM 739]
 gi|242266160|gb|ACS90842.1| A1A0 ATP synthase, subunit B [Thermococcus sibiricus MM 739]
          Length = 467

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 160/319 (50%), Gaps = 23/319 (7%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKG 144
           F     ++  S    GRV N +G+PIDG   +    + D+    ++ V  A  R  ++  
Sbjct: 78  FTGETLKVPVSMDMLGRVFNGIGEPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQ-- 135

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGE 197
             TGI  ID    L  GQ++ +F+GSG+  + L +  AR        + F  V+ + +G 
Sbjct: 136 --TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVVFAAMGI 192

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
              E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY +   D  VL+I
Sbjct: 193 TYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVI 252

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  +T +A ++REI+    E+P  RGYP  ++++L  + ER G     KG+IT +  + +
Sbjct: 253 LTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGRKGSITQMPILTM 312

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKK 371
             D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL      K  + +E  
Sbjct: 313 PDDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPIDVLPSLSRLMKDGIGKGRTREEHS 372

Query: 372 LVSSLTHLIHRFEETRDIR 390
            +S    L   + E R +R
Sbjct: 373 QLSQ--QLYAAYAEGRSLR 389


>gi|241912860|gb|ACS72108.1| AtpB [Goodyera pubescens]
          Length = 489

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|228015941|gb|ACP50781.1| ATP synthase CF1 beta subunit [Pinus ponderosa]
          Length = 492

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P           F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  +
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219

Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            D  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPTDDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 397 KELQDIIAI----PGLD 409


>gi|12004129|gb|AAG43904.1|AF213773_1 ATP synthase beta subunit [Cyclamen hederifolium]
          Length = 482

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 220 GVINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 277

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 278 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 335

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 336 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 395

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 396 QRYKELQDIIAILG 409


>gi|110915630|gb|ABH02603.1| ATP synthase beta subunit [Dupontia fisheri]
          Length = 474

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 81  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 137

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 197

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 198 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 257

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 258 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 315

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 316 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 375

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 376 ELQDIIAILG 385


>gi|110915638|gb|ABH02607.1| ATP synthase beta subunit [Festuca subverticillata]
          Length = 490

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|20269446|gb|AAM17950.1| ATP synthase beta subunit [Vaccinium uliginosum]
          Length = 432

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  P
Sbjct: 61  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELETKLSIFETGIKVVDLLAP 117

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  +      
Sbjct: 118 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKXMKETG 176

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 177 VINEQNIAESKVALVYGQMNEPPGARMRVXXTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 236

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 237 AGSEVSALLGRIPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 294

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       D+  K+   +   + R+
Sbjct: 295 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQKVKQTLQRY 354

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 355 KELQDIIAILG 365


>gi|327537654|gb|EGF24365.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica WH47]
          Length = 491

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 10/268 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
               R+ +  G  ID  + L   ++    + + PP ++R+  +   F+TGI+VID+  PL
Sbjct: 89  ALLSRMFDVFGNTIDRGEELS--EVERRSVHRDPPLLSRRSTKSEVFETGIKVIDVLVPL 146

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G + G+F G+G+GK+ LL+    +    +  +S+   +GER RE  E   +      L
Sbjct: 147 ERGGKAGLFGGAGVGKTVLLTELIHNMVGKQKGVSIFCGIGERCREGEELYREMKDAGVL 206

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273
           K   +V    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  E++   
Sbjct: 207 KDMAMVFGQMNEPPGARFRVGHVALTMAEYFRDDEHRDVLLLIDNIFRFIQAGMEVSGLM 266

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G++P   GY  ++ +EL  L ERI  +  + G IT++ +V V  D+  DP A    S L 
Sbjct: 267 GQMPSRLGYQPTMGTELASLEERI--ANTDTGAITSIQAVYVPADDFTDPAAAHTFSHLS 324

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             IVL+R  A EG +P +DPL S S++A
Sbjct: 325 ASIVLSRKRASEGLFPAIDPLQSSSKMA 352


>gi|307289038|ref|ZP_07568994.1| ATP synthase [Enterococcus faecalis TX0109]
 gi|306499747|gb|EFM69108.1| ATP synthase [Enterococcus faecalis TX0109]
 gi|315163949|gb|EFU07966.1| ATP synthase ab [Enterococcus faecalis TX1302]
          Length = 458

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+ IN D   +        I++ D     + H     +SP     GRV + LG+  D 
Sbjct: 42  GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99

Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
              L    K D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+ SG+
Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155

Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
               L +  AR      S+    V+ + +G    E   F+ED+     + +SV+ +  ++
Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 215

Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP 
Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G     KG++T +  + +  ++   PI D    I +G I+L+R L +
Sbjct: 276 YLYTNLATLYERAGRIRDSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335

Query: 345 EGRYPPVDPLASVSRLADKA 364
            G  PP+D L S+SRL DK 
Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355


>gi|270313039|gb|ACZ73601.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 495

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTXLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDGNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 336 PATXFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|156598493|gb|ABU85505.1| ATP synthase CF1 beta subunit [Passiflora biflora]
          Length = 498

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---ELGPVDTRTTSPIHRSAPTFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +     
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYVEMKESG 220

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++ +IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEASITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530085|gb|ABU75139.1| AtpB [Swietenia mahagoni]
          Length = 439

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D L+   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 45  GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 101

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 102 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 161

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 162 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 221

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 222 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 279

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 280 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 339

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 340 KELQDIIAILG 350


>gi|21684915|emb|CAD11584.1| ATP synthase beta subunit [Restio paludosus]
          Length = 491

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  ++       F+TGI+V+D+  P
Sbjct: 99  ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 155

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 156 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 215

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 216 INEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQA 275

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +K +IT++ +V V  D+  DP  
Sbjct: 276 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTDPAP 333

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 334 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRYK 393

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 394 ELQDIIAILG 403


>gi|305671681|gb|ADM63150.1| ATP synthase beta subunit [Zabelia tyaihyoni]
          Length = 489

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       ++  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGNKHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|270313035|gb|ACZ73599.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 498

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004133|gb|AAG43906.1|AF213775_1 ATP synthase beta subunit [Androsace sp. Anderberg s.n.]
          Length = 483

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+
Sbjct: 98  LRVPVGGATLGRIFNVLGEPVD---NLGPVDTXTTSPIHRSAPAFIQLDTKLSIFETGIK 154

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 155 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 214

Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 215 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 274

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D
Sbjct: 275 IFRFGQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 332

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 333 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 392

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 393 ETLQRYKELQDIIAILG 409


>gi|5001601|gb|AAD37047.1|AF092121_1 ATP synthase beta subunit [Schumacheria sp. SH1999]
          Length = 494

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +    LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PXTTFXHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|4206598|gb|AAD11730.1| ATP synthase beta subunit [Sarcomelicope simplicifolia]
          Length = 471

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 160/313 (51%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 200

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           SVV+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 201 SVVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 260

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 261 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 318

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 319 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 378

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 379 RYKELQDIIAILG 391


>gi|110915614|gb|ABH02595.1| ATP synthase beta subunit [Cutandia memphitica]
          Length = 475

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  P
Sbjct: 82  ATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 138

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 139 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 198

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 199 INEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 258

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 259 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 316

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 317 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 376

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 377 ELQDIIAILG 386


>gi|110915708|gb|ABH02642.1| ATP synthase beta subunit [Vahlodea atropurpurea]
          Length = 490

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915572|gb|ABH02574.1| ATP synthase beta subunit [Aira cupaniana]
          Length = 481

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 204 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|110915592|gb|ABH02584.1| ATP synthase beta subunit [Beckmannia syzigachne]
          Length = 472

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|16416760|gb|AAL18403.1|AF313557_1 ATP synthase beta chain [Sphagnum palustre]
          Length = 394

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 5   ATLGRIFNVLGEPVD---NLGPVDAGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 61

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 62  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 121

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 122 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 181

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 182 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 239

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 240 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 298

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 299 KELQDIIAILG 309


>gi|62902869|gb|AAY19349.1| ATP synthase beta subunit [Lagenaria breviflora]
 gi|66276283|gb|AAY44156.1| ATP synthase beta subunit [Lagenaria breviflora]
          Length = 488

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|293363527|ref|ZP_06610283.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2]
 gi|292552876|gb|EFF41630.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2]
          Length = 461

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 207/413 (50%), Gaps = 26/413 (6%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVV--HQGKN----SDNLGQVIRINLDIVYICPVG 76
            G I SI++    V    +++ + + V+  H+G       + L + +   + +  I P+ 
Sbjct: 2   NGIIKSISTDVVKVEFQEEFMPMANHVLTLHKGNTYLLVKNALSKTLVSAIVVYNIAPIN 61

Query: 77  IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
           +G+E+     V     F +       G V +  G  ID  + + KG   +E M+ + P  
Sbjct: 62  VGDEV-----VNTKKSFMVPVGDAAKGHVYDFTGHAID-TNPIDKGLKHVE-MNSIAPKD 114

Query: 137 NRQRV-EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKV 190
           N  +V E+  +TGI+V+D F P+  G ++G+F G+G+GK+ L+     +   +++    +
Sbjct: 115 NIIKVNEEILETGIKVVDFFIPIFKGYKLGIFGGAGVGKTVLMKEIIFNTLKQNNTNSSI 174

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
            I   GER RE  E  ++    NL   S++ ++  +ESP  R       +T AEY    +
Sbjct: 175 FIG-SGERSREGIELYQELTDSNLMANSMLFISKMNESPGARMNIVPIGITSAEYLRDVQ 233

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
            +NVLL +D+I R+  +  E + + G+ P   GY +++ S++  + +R+  ++   G+IT
Sbjct: 234 NENVLLFIDNIYRYIQAGNEASASLGKKPSIGGYQSTLDSDVATIEDRLFANQN--GSIT 291

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSA 367
           +  +V +  D+ +DP A ++ + LD  +VL+R L  +  +P +DPLAS + + D K    
Sbjct: 292 SFQTVFLPMDDISDPSAVAIFNHLDSTLVLSRELTSKNIFPAIDPLASSTNIVDEKVLGH 351

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  + +     ++ ++EE  D+  I G    +D    + VH+   + +F  Q+
Sbjct: 352 EHYEAIIETKRILKKYEELEDVISIFGVD-DLDEENKEIVHKALQLQNFFTQN 403


>gi|113910808|gb|ABI48136.1| ATPase beta subunit [Radula complanata]
          Length = 464

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  ++S       P PA  +   +   F+TGI+V+D+  P
Sbjct: 75  ATLGRIFNVLGEPVD---DLGPVNVSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 131

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 132 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 190

Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 191 VINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 250

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 251 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 308

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 309 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 367

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 368 YKELQDIIAILG 379


>gi|313199709|ref|YP_004021323.1| ATP synthase CF1 beta subunit [Theobroma cacao]
 gi|309321273|gb|ADO64816.1| ATP synthase CF1 beta subunit [Theobroma cacao]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSTIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|160881199|ref|YP_001560167.1| V-type ATP synthase subunit B [Clostridium phytofermentans ISDg]
 gi|160429865|gb|ABX43428.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium phytofermentans ISDg]
          Length = 460

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 159/312 (50%), Gaps = 18/312 (5%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S     RV + LG+PIDG  + L +  + +  +   P A  R   ++  +TG+  ID   
Sbjct: 82  SEDMLSRVFDGLGRPIDGGPEILPEKRMDINGLPMNPVA--RNYPQEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209
            L  GQ++ +F+ SG+  + L +  AR       ++ F  V+ + +G    E   F E +
Sbjct: 140 TLVRGQKLPIFSASGLPHAELAAQIARQAKVRGTNEAF-AVVFAAMGITFEEANFFTESF 198

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                + ++V+ V  +++  + R   P  A+T AEY + + D +VL+IL  IT +A S+R
Sbjct: 199 KETGAIDRTVMFVNLANDPAVERIATPRMALTAAEYLAFEKDMHVLVILTDITNYADSLR 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++    E+P  RGYP  ++++L  L ER G  + + G+IT +  + +  D+   PI D 
Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILTMPEDDKTHPIPDL 318

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382
              I +G I+L+R L  +G  PP+D L S+SRL DK         D    ++ L     R
Sbjct: 319 TGYITEGQIILSRDLYRQGVTPPIDVLPSLSRLKDKGIGEGKTRKDHANTMNQLFAAYAR 378

Query: 383 FEETRDIRLIGG 394
            +E +++ ++ G
Sbjct: 379 GKEAKELMVVLG 390


>gi|4063546|gb|AAC98331.1| ATP synthase beta subunit [Francoa appendiculata]
          Length = 456

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|305671621|gb|ADM63120.1| ATP synthase beta subunit [Triosteum perfoliatum]
          Length = 489

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 42  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 217

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E+
Sbjct: 218 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +D
Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKNHYETAQRVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|110915692|gb|ABH02634.1| ATP synthase beta subunit [Rostraria pubescens]
 gi|110915706|gb|ABH02641.1| ATP synthase beta subunit [Trisetum cernuum subsp. canescens]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915620|gb|ABH02598.1| ATP synthase beta subunit [Deschampsia cespitosa subsp. cespitosa]
          Length = 472

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 79  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 196 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 255

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 256 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 313

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 314 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 373

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 374 ELQDIIAILG 383


>gi|110915578|gb|ABH02577.1| ATP synthase beta subunit [Amphibromus scabrivalvis]
 gi|110915604|gb|ABH02590.1| ATP synthase beta subunit [Calamagrostis arundinacea]
 gi|110915702|gb|ABH02639.1| ATP synthase beta subunit [Torreyochloa pallida var. pauciflora]
 gi|110915704|gb|ABH02640.1| ATP synthase beta subunit [Triplachne nitens]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915652|gb|ABH02614.1| ATP synthase beta subunit [Helictotrichon convolutum]
 gi|110915654|gb|ABH02615.1| ATP synthase beta subunit [Helictotrichon mortonianum]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|61968227|gb|AAX57040.1| ATP synthase beta subunit [Bridelia ferruginea]
          Length = 479

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIELDTELSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSGV 209

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 210 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +       +   S+   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGTKHYETAQSVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|7708167|emb|CAB90026.1| ATP synthase beta subunit [Bersama lucens]
          Length = 485

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIIAILG 400


>gi|20467359|gb|AAL27810.1| ATPase beta subunit [Ephedra americana]
          Length = 427

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 82  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS-- 217
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + ++   +K+S  
Sbjct: 139 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDPHM--EMKESGV 196

Query: 218 -----------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
                       +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 197 INEKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++
Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYK 374

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 375 ELQDIIAILG 384


>gi|323715478|gb|ADY04807.1| ATP synthase beta subunit [Hydrangea serrata]
          Length = 482

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 91  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 209

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 210 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 269

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 270 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 327

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E
Sbjct: 328 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 387

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 388 LQDIIAILG 396


>gi|257413219|ref|ZP_04742355.2| V-type sodium ATPase, B subunit [Roseburia intestinalis L1-82]
 gi|257204259|gb|EEV02544.1| V-type sodium ATPase, B subunit [Roseburia intestinalis L1-82]
 gi|291539214|emb|CBL12325.1| Archaeal/vacuolar-type H+-ATPase subunit B [Roseburia intestinalis
           XB6B4]
          Length = 462

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 26/362 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCG 103
           +V +GK    LG+++ IN D   +      EE+SL  L  H  R    P     S    G
Sbjct: 36  LVVEGKQK-KLGRIVEINNDYAVVQVFESTEEMSL--LNTH-ARLTGRPLCVGLSEEILG 91

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R  N LG+PIDG  ++   ++  ++  +     +R+      +TGI  ID  T L  GQ+
Sbjct: 92  RTFNGLGQPIDGLGAV-HAEVVRDVNGQPMNPCSREYPRNYIRTGISAIDGLTTLIRGQK 150

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL 214
           + +F+G+G+    L +                   V+ + +G +      F   +    +
Sbjct: 151 LPIFSGNGLPHDELAAQIVEQASLGDGENEDEPFAVVFAAMGVKYDVAEYFKRRFAECGV 210

Query: 215 KKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272
              V +       P+  ++  P  A+T AEY +  K  ++L+IL  +T FA ++RE++  
Sbjct: 211 SDHVAMFLNLSNDPVAERLITPKVALTAAEYLAFEKNMHILVILTDMTSFAEAMREVSAQ 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE+P  +GYP  ++SE   L ER G      G++T +  + +  D+   PI D    I 
Sbjct: 271 KGEIPSRKGYPGYLYSEFAALYERAGIVNGASGSVTQIPILTMPNDDITHPIPDLTGYIT 330

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETR 387
           +G IVL RSL ++  YPP++ L S+SRL      +K    D + L + L     R  E R
Sbjct: 331 EGQIVLERSLHQKNIYPPINVLPSLSRLMKDGIGEKYTREDHQDLANQLFSSYARVGEAR 390

Query: 388 DI 389
           D+
Sbjct: 391 DL 392


>gi|110915684|gb|ABH02630.1| ATP synthase beta subunit [Poa billardierei]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915618|gb|ABH02597.1| ATP synthase beta subunit [Dactylis glomerata subsp. hackelii]
          Length = 471

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  +  +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTXSTEMGXLQERIAXTKK--GSITSIQAVYVPADDXTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|160894636|ref|ZP_02075411.1| hypothetical protein CLOL250_02187 [Clostridium sp. L2-50]
 gi|156863570|gb|EDO57001.1| hypothetical protein CLOL250_02187 [Clostridium sp. L2-50]
          Length = 456

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 19/328 (5%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + LG+PID G D L +    +  +   P A  R    +  +TGI  ID   
Sbjct: 82  SEDMLGRVFDGLGRPIDKGPDILPEERRDINGLPMNPAA--RNYPSEFIQTGISAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  S L +  AR      +D    V+ + +G    E   F E + 
Sbjct: 140 TLVRGQKLPIFSASGLPHSKLAAQIARQAKVRGTDEPFAVVFAAMGITFEEANFFTESFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               + ++V+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A ++RE
Sbjct: 200 ETGAIDRTVLFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  L ER G    + G+IT +  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLATLYERAGRQRGKNGSITMIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEET 386
             I +G I+L+R L  +G  PP+D L S+SRL DK     + +    S++  L   +   
Sbjct: 320 GYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGTGEGKTRGDHSSTMNQLFAAYSRG 379

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +D + +      + ++ + A+  + I+Y
Sbjct: 380 KDAKEL------MTILGESALSDIDILY 401


>gi|113910760|gb|ABI48112.1| ATPase beta subunit [Conocephalum conicum]
          Length = 472

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 85  LGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 142 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 201

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 202 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 261

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 262 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 319

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 320 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 378

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 379 LQDIIAILG 387


>gi|8517661|emb|CAB94382.1| ATP synthase beta subunit [Silene nutans]
          Length = 488

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 158/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
               GR+ N LG+P+D    +G    S   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVGTHTTSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|16416728|gb|AAL18388.1|AF313540_1 ATP synthase beta chain [Danaea elliptica]
 gi|164566079|gb|ABY61182.1| ATP synthase beta subunit [Danaea geniculata]
 gi|164566083|gb|ABY61184.1| ATP synthase beta subunit [Danaea geniculata]
 gi|164566085|gb|ABY61185.1| ATP synthase beta subunit [Danaea geniculata]
 gi|164566103|gb|ABY61194.1| ATP synthase beta subunit [Danaea leprieurii]
 gi|164566139|gb|ABY61212.1| ATP synthase beta subunit [Danaea sp. B MJMC-2008]
 gi|164566141|gb|ABY61213.1| ATP synthase beta subunit [Danaea sp. C MJMC-2008]
          Length = 394

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|76577972|gb|ABA02340.2| ATP synthase CF1 beta chain [Tetraselmis suecica]
          Length = 484

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D +  + I    P  ++       F+TGI+V+D+  P   
Sbjct: 98  GRIFNVLGQPVD---NLGPVDSTDGLTIHRTAPAFVDLDTKLAIFETGIKVVDLLAPYRR 154

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIKE 214

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 215 SNLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGAE 274

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 275 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 332

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E 
Sbjct: 333 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEEHYSCAQNVKQTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|15644358|ref|NP_229410.1| F0F1 ATP synthase subunit beta [Thermotoga maritima MSB8]
 gi|148270311|ref|YP_001244771.1| F0F1 ATP synthase subunit beta [Thermotoga petrophila RKU-1]
 gi|170289062|ref|YP_001739300.1| ATP synthase F1, beta subunit [Thermotoga sp. RQ2]
 gi|281412618|ref|YP_003346697.1| ATP synthase F1, beta subunit [Thermotoga naphthophila RKU-10]
 gi|3913124|sp|O50550|ATPB_THEMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222424|sp|A5ILX2|ATPB_THEP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740686|sp|B1LBB9|ATPB_THESQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|4982182|gb|AAD36677.1|AE001805_2 ATP synthase F1, subunit beta [Thermotoga maritima MSB8]
 gi|2687836|emb|CAA75784.1| F1F0-ATPase beta subunit [Thermotoga maritima MSB8]
 gi|147735855|gb|ABQ47195.1| ATP synthase F1, beta subunit [Thermotoga petrophila RKU-1]
 gi|170176565|gb|ACB09617.1| ATP synthase F1, beta subunit [Thermotoga sp. RQ2]
 gi|281373721|gb|ADA67283.1| ATP synthase F1, beta subunit [Thermotoga naphthophila RKU-10]
          Length = 468

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 16/327 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K      I    P  + +    +  +TGI+VID+  P   G
Sbjct: 90  LGRILNVIGEPVDEAGEI-KAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG F G+G+GK+ L+    R+   +    S+   VGER RE  E ++E      L  +
Sbjct: 149 GKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVLGNT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R    LTA+TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 VLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +   +G+IT+V ++ V  D+  DP   +  + LD  +
Sbjct: 269 PSAVGYQPTLATDMGELQERI--TSTRRGSITSVQAIYVPADDITDPAPATTFAHLDATV 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R +AE G YP VDPL S S++ D A    E  ++   +  ++ R+++ +DI  I G 
Sbjct: 327 VLSRRIAELGLYPAVDPLDSSSKILDPAIVGREHYEVARGVQEVLQRYKDLQDIIAILGV 386

Query: 396 R---PGVDLILDKAVHQVPIIYDFLKQ 419
               P   L+    VH+   I  FL Q
Sbjct: 387 EELSPEDKLV----VHRARRIQRFLSQ 409


>gi|315427343|dbj|BAJ48953.1| V-type H+-transporting ATPase subunit B [Candidatus Caldiarchaeum
           subterraneum]
          Length = 454

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 16/282 (5%)

Query: 91  GRFRISP-SACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           GR   +P S    GRV + LG+PIDG  D + +  L +      P    R+      +TG
Sbjct: 79  GRTMETPVSTEMLGRVFDGLGRPIDGLPDPIAEDVLDVNGEPINPE--QREYPSDFIQTG 136

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV 202
           I  ID    L  GQ++ +F+G+G+  + L +  AR            VI + VG +  E 
Sbjct: 137 ISAIDGMNSLVRGQKLPIFSGAGLPHNMLAAQIARQATVPGKEEEFAVIFAAVGVQNDEA 196

Query: 203 REF---IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
           R F   +E+     +K+S + +  +D+  I R + P  A+T+AEY + K G +VL+I+  
Sbjct: 197 RYFRRSLEE--SGAIKRSALFLNLADDPAIERIVTPRIALTLAEYLAFKQGYHVLVIITD 254

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           IT +A ++RE++    E+P  +GYP  ++++L  L ER G  +  KG++T +  + +  D
Sbjct: 255 ITNYAEALREVSAAREEVPGRKGYPGYMYTDLASLYERAGRIKGLKGSLTQMPILSMPSD 314

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   PI D    I +G IVL+R L  +G YPP++ L S+SRL
Sbjct: 315 DITHPIPDLTGYITEGQIVLSRDLYRKGIYPPINVLMSLSRL 356


>gi|110915616|gb|ABH02596.1| ATP synthase beta subunit [Cynosurus cristatus]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|159106871|ref|YP_001531290.1| ATP synthase CF1 beta subunit [Lolium perenne]
 gi|190358678|sp|A8Y9H7|ATPB_LOLPR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|158934405|emb|CAO85983.1| ATP synthase CF1 beta subunit [Lolium perenne]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|119368192|dbj|BAF40439.1| ATP synthase beta subunit [Clusia rosea]
          Length = 489

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|113910786|gb|ABI48125.1| ATPase beta subunit [Lophozia gillmani]
          Length = 456

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVSSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAISG 371


>gi|332105865|gb|AEE01395.1| ATP synthase beta chain [Brachychiton acerifolius]
          Length = 493

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|118430395|ref|YP_874660.1| ATP synthase CF1 beta subunit [Hordeum vulgare subsp. vulgare]
 gi|126302525|sp|P00828|ATPB_HORVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|118201049|gb|ABK79420.1| ATP synthase CF1 beta subunit [Hordeum vulgare subsp. vulgare]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|113910758|gb|ABI48111.1| ATPase beta subunit [Reboulia hemisphaerica]
          Length = 472

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +++    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVEVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|71842251|ref|YP_277339.1| ATP synthase CF1 beta subunit [Emiliania huxleyi]
 gi|118573534|sp|Q4G3C8|ATPB_EMIHU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|52547728|gb|AAU81899.1| ATP synthase CF1 beta chain [Emiliania huxleyi]
 gi|60101494|gb|AAX13838.1| ATP synthase CF1 beta subunit [Emiliania huxleyi]
          Length = 476

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D    +G  +    + I    P   +       F+TGI+V+D+  P   
Sbjct: 91  GRIFNVLGEPVD---EMGPCEATAGLPIHRAAPAFTDLDTKPSVFETGIKVVDLLAPYKR 147

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF---------IE 207
           G +IG+F G+G+GK+ L+    +  AR+     V   +  ER RE  +          I+
Sbjct: 148 GGKIGLFGGAGVGKTVLIMELINNIARAHGGVSVFGGVG-ERTREGNDLYAEMKESGVID 206

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +   DN  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 207 EKKLDN-SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTTEGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +   A+      ++   + R++E
Sbjct: 324 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPEIVGAEHYATAQNIKETLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|325479306|gb|EGC82402.1| ATP synthase ab C terminal domain protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 581

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 147/282 (52%), Gaps = 18/282 (6%)

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           K  P  +   +EK F+TG RV+D+F PL  G  + +  G G GK+ L    A+    D +
Sbjct: 192 KQRPVKSSMPIEKLFETGQRVLDVFFPLAKGGTVAIPGGFGTGKTMLQHQLAQYSDVDII 251

Query: 191 IISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIA 242
           I    GERG E+ + +E++        G  L +  +++A +   P+  + A + T +T+A
Sbjct: 252 IYIGCGERGNEMTQVLEEFPDLIDPNTGKGLMERTILIANTSNMPVAAREASIYTGITMA 311

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G +V L+ DS +R+A ++REI+    E+P   GYP  + S L +  ER G  + 
Sbjct: 312 EYFRDMGYDVALMADSSSRWAEALREISGRLEEIPAEEGYPAYLGSRLSQFYERAGYFKN 371

Query: 303 ---EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               +G++T + +V   G + ++P+ ++ R  ++  + L+R LA    YP ++ L+S S 
Sbjct: 372 LNGSEGSVTLIGAVSPSGGDFSEPVTENTRRCVNVFLGLDRKLAYSRHYPAINWLSSYSN 431

Query: 360 LADKAWSADEKKL-------VSSLTHLIHRFEETRDIRLIGG 394
             +K  S  E++L        + L +++   +E R I ++ G
Sbjct: 432 YIEKIRSYYEERLGRDIIAIRNKLMNVLLEEDEVRSIMMLVG 473


>gi|110915606|gb|ABH02591.1| ATP synthase beta subunit [Calamagrostis canadensis]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRXAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915676|gb|ABH02626.1| ATP synthase beta subunit [Parapholis incurva]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915574|gb|ABH02575.1| ATP synthase beta subunit [Alopecurus magellanicus]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|20467381|gb|AAL27821.1| ATPase beta subunit [Ephedra fragilis]
          Length = 447

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 74  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS-- 217
            G +IG+F G+ +GK+ L+     +       +S+ G  G+  RE  + Y+   +K+S  
Sbjct: 131 RGGKIGLFGGAXVGKTVLIMELINNIAKAHGGVSVFGGVGKRTREGNDLYM--EMKESGV 188

Query: 218 -----------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
                       +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 189 INEKNIIESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 248

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 249 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 306

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++
Sbjct: 307 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYK 366

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 367 ELQDIIAILG 376


>gi|28188329|gb|AAL92544.1| ATP synthase beta subunit [Coleochaete sp. 327d3]
          Length = 399

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D +  + + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDSTTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|110915646|gb|ABH02611.1| ATP synthase beta subunit [Gaudinia hispanica]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915686|gb|ABH02631.1| ATP synthase beta subunit [Podagrostis thurberiana]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S   +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVAJVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915680|gb|ABH02628.1| ATP synthase beta subunit [Poa alpina]
          Length = 471

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 78  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 134

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 135 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 194

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 195 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 254

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 255 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLXDPAP 312

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 313 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 372

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 373 ELQDIIAILG 382


>gi|155029295|dbj|BAF75528.1| ATP synthase beta subunit [Argomuellera macrophylla]
          Length = 480

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+
Sbjct: 81  LRVPVGGATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIK 137

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 138 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 197

Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 198 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 257

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D
Sbjct: 258 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 316 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVK 375

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 376 QTLQRYKELQDIIAILG 392


>gi|119350481|gb|ABL63191.1| AtpB [Closteriopsis acicularis]
          Length = 392

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   +  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDDLGPVNNKE-QLPIHRSAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          DN
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVIDEDN 157

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 217

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 218 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       D+  +   ++   + R++E +DI
Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 335

Query: 390 RLIGG 394
             I G
Sbjct: 336 IAILG 340


>gi|119368020|dbj|BAF40513.1| ATP synthase beta subunit [Oldfieldia dactylophylla]
          Length = 489

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +      K  +TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLKILETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L      +D  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVGSDHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708648|emb|CAB89998.1| ATP synthase beta subunit [Solanum americanum subsp. nodiflorum]
          Length = 479

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|20384961|gb|AAM19147.1| ATP synthase beta subunit [Coleochaete sp. 18a1]
          Length = 402

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---QLGPVDSTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|6017806|gb|AAF01637.1| ATP synthase beta subunit [Itea ilicifolia]
          Length = 494

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|50401827|sp|P62614|ATPB_AEGCR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50401828|sp|P62626|ATPB_AEGCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|343981|dbj|BAA01870.1| ATP synthase beta subunit [Aegilops columnaris]
 gi|343984|dbj|BAA01872.1| ATP synthase beta subunit [Aegilops crassa]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|110915596|gb|ABH02586.1| ATP synthase beta subunit [Brachypodium pinnatum]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMRESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915634|gb|ABH02605.1| ATP synthase beta subunit [Elymus trachycaulus]
 gi|110915662|gb|ABH02619.1| ATP synthase beta subunit [Littledalea tibetica]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910764|gb|ABI48114.1| ATPase beta subunit [Dumortiera hirsuta]
          Length = 469

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +++    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 80  ATLGRIFNVLGEPVD---NLGPVEVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 137 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 196

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 197 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|113910926|gb|ABI48195.1| ATPase beta subunit [Anemia phyllitidis]
          Length = 419

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 63  LGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 119

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     + 
Sbjct: 120 RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 178

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  + 
Sbjct: 179 NEQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAG 238

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 239 SEVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPA 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 297 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 355

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 356 ELQDIIAILG 365


>gi|7708315|emb|CAB90086.1| ATP synthase beta subunit [Globularia salicina]
          Length = 492

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|19033071|gb|AAL83520.1|AF408792_1 ATP synthase beta subunit [Chaetosphaeridium globosum]
          Length = 399

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G ++  + S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 37  LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 150

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 151 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 208

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 209 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 266

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 267 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 325

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 326 QRYKELQDIIAILG 339


>gi|153012228|ref|YP_001381743.1| ATP synthase CF1 beta subunit [Medicago truncatula]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 177/368 (48%), Gaps = 27/368 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           ++ QG+  D +GQ I +  ++        V    +   + +  G +V + G    +    
Sbjct: 47  LIVQGR--DTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMVVINTGAPLSVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PID    +  G  S  I    P  +        F+TGI+V+D+  P  
Sbjct: 105 ATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 223

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 224 EKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 342 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKEL 401

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 402 QDIIAILG 409


>gi|149071996|ref|YP_001293559.1| ATP synthase subunit B [Rhodomonas salina]
 gi|190358718|sp|A6MVY0|ATPB_RHDSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134302947|gb|ABO70751.1| ATP synthase subunit B [Rhodomonas salina]
          Length = 471

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVEKG-FKTGIRVIDIF 155
              GR+ N LG P+D       G++SME    + ++ P       +   F+TGI+V+D+ 
Sbjct: 84  STLGRIFNVLGVPVDE-----MGEVSMETTLPIHRLSPRFTELETKPSIFETGIKVVDLL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210
            P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+     
Sbjct: 139 APYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 198

Query: 211 ----GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 199 GVINASNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTREGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHR 382
              +  S LD   VL+R+LA +G YP VDPL S S +       ++       +   + R
Sbjct: 317 APATTFSHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQINIVGSEHYDTAQDVKETLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIIAILG 388


>gi|21684919|emb|CAD11586.1| ATP synthase beta subunit [Thurnia sphaerocephala]
          Length = 409

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 17  ATLGRIFNVLGEPVD---NLGAVDSSXTSPIHRSAPAFIQLDTTLSIFETGIKVVDLLAP 73

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 74  XRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 133

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 134 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 193

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G  P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP  
Sbjct: 194 GSEVSALLGRXPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 251

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 252 ATTFAHLDATTVLSRPLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRYK 311

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 312 ELQDIIAILG 321


>gi|270313031|gb|ACZ73597.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|296120449|ref|YP_003628227.1| ATP synthase F1 subunit beta [Planctomyces limnophilus DSM 3776]
 gi|296012789|gb|ADG66028.1| ATP synthase F1, beta subunit [Planctomyces limnophilus DSM 3776]
          Length = 481

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 168/309 (54%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPL 158
           GRV N LG+PIDG     +G+++ E    + + PP + +     + F+TGI+V+D+  P 
Sbjct: 96  GRVFNVLGEPIDG-----RGEVAAEDHWPIHRDPPKLEDLSSKTEIFETGIKVVDLLIPF 150

Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLG 211
             G + G+F G+G+GK+ +L  + AR  S      + + VGER RE      E  E  +G
Sbjct: 151 VRGGKAGLFGGAGLGKTVILQELIARIASTHGGYSVFAGVGERTREGNDLWLEMQETQIG 210

Query: 212 DN----LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
                 ++++ +V    +E P  R    L+A+T+AE+F  + G + LL +D+I RF+ + 
Sbjct: 211 STGRAVIEQTCMVFGQMNEPPGARLRVALSALTMAEWFRDTTGADTLLFVDNIFRFSQAG 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +EL  L ERI  +  ++G IT+V +V V  D+  DP   
Sbjct: 271 SEVSALLGRMPSAVGYQPTLSTELGALQERI--TSTKRGAITSVQAVYVPADDPTDPAPA 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385
           +  S LD  I L R +AE+G YP +DPLAS SR+ D     +     +  +  ++ R+ E
Sbjct: 329 TAFSHLDAFIYLERKIAEKGLYPAIDPLASSSRILDPQIVGERHYACARRVQKILQRYRE 388

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 389 LQDIIAILG 397


>gi|184127837|gb|ACC67818.1| ATP synthase beta chain [Danaea elliptica]
          Length = 399

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 128

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 189 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 306 LQDIIAILG 314


>gi|125716971|ref|YP_001034104.1| V-type ATP synthase subunit B [Streptococcus sanguinis SK36]
 gi|167016639|sp|A3CK49|VATB_STRSV RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|125496888|gb|ABN43554.1| V-type sodium ATPase, subunit B, putative [Streptococcus sanguinis
           SK36]
          Length = 464

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 160/325 (49%), Gaps = 13/325 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +H G  S   GQV+ +  D  +V +     G  +    + F      +  S    GR+ N
Sbjct: 36  LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            +GKPIDG  ++   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF
Sbjct: 94  GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152

Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           +GSG+    L +  AR      SD    V+   +G    E   F+ D      + +SV+ 
Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFVAMGITFEEAEFFMNDLRETGAIDRSVLF 212

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  
Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+
Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332

Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364
           R L   G  PP++ L S+SRL DK 
Sbjct: 333 RELYNSGYRPPINVLPSLSRLKDKG 357


>gi|6686914|emb|CAB64775.1| ATP synthase beta subunit [Boopis graminea]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|320454991|dbj|BAJ65641.1| ATP synthase beta subunit [Metzgeria decipiens]
 gi|320454997|dbj|BAJ65645.1| ATP synthase beta subunit [Metzgeria temperata]
          Length = 492

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 103 ATLGRIFNVLGEPVDNLGPVNAGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|305671631|gb|ADM63125.1| ATP synthase beta subunit [Lonicera japonica]
 gi|305671699|gb|ADM63159.1| ATP synthase beta subunit [Leycesteria formosa]
          Length = 489

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKNHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|110915600|gb|ABH02588.1| ATP synthase beta subunit [Bromus inermis]
 gi|110915602|gb|ABH02589.1| ATP synthase beta subunit [Bromus suksdorfii]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|19033081|gb|AAL83525.1|AF408797_1 ATP synthase beta subunit [Spirogyra maxima]
          Length = 402

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D     EI    P           F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---NLGPVDAVTKFEIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGPEHYETAQGVKQTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|212896604|gb|ACJ38505.1| membrane-bound ATP synthase subunit B [Teramnus uncinatus]
          Length = 467

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 33  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 93  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 209

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 210 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 269

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 327

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 328 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 387

Query: 390 RLIGG 394
             I G
Sbjct: 388 IAILG 392


>gi|159227588|emb|CAJ80585.1| ATP synthase beta subunit [Physalis aequata]
          Length = 343

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 20/305 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 42  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 98

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 99  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 158

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 159 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 218

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 219 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 276

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 277 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 336

Query: 385 ETRDI 389
           E +DI
Sbjct: 337 ELQDI 341


>gi|118430309|ref|YP_874743.1| ATP synthase CF1 beta subunit [Agrostis stolonifera]
 gi|125987717|sp|A1EA15|ATPB_AGRST RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|118201218|gb|ABK79587.1| ATP synthase CF1 beta subunit [Agrostis stolonifera]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|19033095|gb|AAL83532.1|AF408804_1 ATP synthase beta subunit [Entransia fimbriata]
 gi|61196974|gb|AAX39472.1| ATP synthase beta subunit [Entransia fimbriata]
          Length = 402

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG     L+  I    P  +        F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---NLGPVNNSLTAPIHRNSPAFIQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+   +   +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQGVKETLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|21684913|emb|CAD11583.1| ATP synthase beta subunit [Elegia asperiflora]
          Length = 491

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  ++       F+TGI+V+D+  P
Sbjct: 99  ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 155

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 156 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 215

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 216 INEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQA 275

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +K +IT++ +V V  D+  DP  
Sbjct: 276 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTDPAP 333

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 334 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRYK 393

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 394 ELQDIIAILG 403


>gi|169260963|gb|ACA52083.1| ATP synthase beta subunit [Sphagnum sp. Lafarge Swamp 28-07-02]
          Length = 413

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 35  ATLGRIFNVLGEPVD---NLGPVDAGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 151

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 152 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 211

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|110915644|gb|ABH02610.1| ATP synthase beta subunit [Gaudinia fragilis]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915570|gb|ABH02573.1| ATP synthase beta subunit [Aira caryophyllea]
          Length = 499

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 105 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 161

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 162 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 221

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 222 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 281

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 282 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 339

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 340 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 399

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 400 KELQDIIAILG 410


>gi|61968287|gb|AAX57070.1| ATP synthase beta subunit [Phyllanthus cf. decipiens Hoffmann et
           al. 162]
          Length = 479

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|22094585|gb|AAM91922.1|AF525277_1 ATPase beta subunit [Populus tomentosa]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMSVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|50346789|ref|YP_053162.1| ATP synthase CF1 beta subunit [Nymphaea alba]
 gi|75323455|sp|Q6EW72|ATPB_NYMAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50250334|emb|CAF28600.1| ATPase beta subunit [Nymphaea alba]
          Length = 498

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFTQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|320455016|dbj|BAJ65655.1| ATP synthase beta subunit [Metzgeria nudifrons]
          Length = 492

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 154/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G
Sbjct: 105 LGRIFNVLGEPVDNLGPVNAGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 163

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 164 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEK 223

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 401 DIIAILG 407


>gi|227553301|ref|ZP_03983350.1| V family ATP synthase subunit B [Enterococcus faecalis HH22]
 gi|227177556|gb|EEI58528.1| V family ATP synthase subunit B [Enterococcus faecalis HH22]
          Length = 442

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+ IN D   +        I++ D     + H     +SP     GRV + LG+  D 
Sbjct: 26  GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 83

Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
              L    K D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+ SG+
Sbjct: 84  GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 139

Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
               L +  AR      S+    V+ + +G    E   F+ED+     + +SV+ +  ++
Sbjct: 140 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 199

Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP 
Sbjct: 200 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 259

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G     KG++T +  + +  ++   PI D    I +G I+L+R L +
Sbjct: 260 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 319

Query: 345 EGRYPPVDPLASVSRLADKA 364
            G  PP+D L S+SRL DK 
Sbjct: 320 SGIQPPIDVLPSLSRLKDKG 339


>gi|212896598|gb|ACJ38502.1| membrane-bound ATP synthase subunit B [Bituminaria bituminosa]
          Length = 467

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 31  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 91  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 207

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 208 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 267

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 268 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 326 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 385

Query: 390 RLIGG 394
             I G
Sbjct: 386 IAILG 390


>gi|110915694|gb|ABH02635.1| ATP synthase beta subunit [Festuca arundinacea]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIAXTKK--GSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|21633433|gb|AAM52191.1| ATP synthase beta subunit [Erycibe glomerata]
          Length = 490

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|52788823|gb|AAU87384.1| ATP synthase beta chain [Anemia phyllitidis]
          Length = 383

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     + 
Sbjct: 64  RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 122

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  + 
Sbjct: 123 NEQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 241 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 300 ELQDIIAILG 309


>gi|329955021|ref|ZP_08296002.1| ATP synthase F1, beta subunit [Bacteroides clarus YIT 12056]
 gi|328526311|gb|EGF53326.1| ATP synthase F1, beta subunit [Bacteroides clarus YIT 12056]
          Length = 506

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L +   +  I  + P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDRAG-AYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KK +                     ++    +E P  R+   L+ +T+AE F   G
Sbjct: 210 GEEFKKGMEEGHWDLSKVDYNEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   
Sbjct: 270 SETNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  ++   +  ++ R +E +DI
Sbjct: 388 HIVGQEHYEVAQRVKQILQRNKELQDI 414


>gi|222099822|ref|YP_002534390.1| ATP synthase subunit beta [Thermotoga neapolitana DSM 4359]
 gi|254808171|sp|B9K7U1|ATPB_THENN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|221572212|gb|ACM23024.1| ATP synthase subunit beta [Thermotoga neapolitana DSM 4359]
          Length = 468

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 16/327 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    + K      I    P  + +    +  +TGI+VID+  P   G
Sbjct: 90  LGRILNVIGEPVDEAGEI-KSKERWPIHRPAPELIEQSTEIEILETGIKVIDLLAPFPKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            +IG F G+G+GK+ L+    R+   +    S+   VGER RE  E ++E      L  +
Sbjct: 149 GKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVLGNT 208

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R    LTA+TIAEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 209 VLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRM 268

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +   +G+IT+V ++ V  D+  DP   +  + LD  +
Sbjct: 269 PSAVGYQPTLATDMGELQERI--TSTRRGSITSVQAIYVPADDITDPAPATTFAHLDATV 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R +AE G YP VDPL S S++ D A    E  ++   +  ++ R+++ +DI  I G 
Sbjct: 327 VLSRRIAELGLYPAVDPLDSSSKILDPAVVGREHYEVARGVQEVLQRYKDLQDIIAILGV 386

Query: 396 R---PGVDLILDKAVHQVPIIYDFLKQ 419
               P   L+    VH+   I  FL Q
Sbjct: 387 EELSPEDKLV----VHRARRIQRFLSQ 409


>gi|154001280|gb|ABS57115.1| ATP synthase beta subunit [Agathis robusta]
          Length = 424

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D           I    P           F+TGI+V+D+  P 
Sbjct: 34  GATLGRIFNVLGEPVD-DLGPVAARAKSPIHRAAPDFTQLDTKFSIFETGIKVVDLLAPY 92

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL- 214
             G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     + 
Sbjct: 93  RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVI 152

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 153 QEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 212

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 213 SEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 270

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E
Sbjct: 271 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKE 330

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 331 LQDIIAILG 339


>gi|37543301|gb|AAL92715.1| ATP synthase beta subunit [Chaetosphaeridium sp. 314c2]
          Length = 402

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G ++  + S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 40  LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 153

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 154 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 211

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 212 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 269

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 270 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 328

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 329 QRYKELQDIIAILG 342


>gi|78102542|ref|YP_358683.1| ATP synthase CF1 beta subunit [Nicotiana sylvestris]
 gi|81238327|ref|NP_054506.2| ATP synthase CF1 beta subunit [Nicotiana tabacum]
 gi|118573704|sp|Q3C1J5|ATPB_NICSY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|254777|gb|AAB23131.1| proton-adenosine triphosphatase beta subunit, proton-ATPase beta
           subunit, coupling factor-1 beta, CF1-beta [Nicotiana
           tabacum, var. Xanthi, tentoxin-resistant, Peptide
           Chloroplast, 498 aa]
 gi|76559641|emb|CAA77360.2| ATPase beta subunit [Nicotiana tabacum]
 gi|77799569|dbj|BAE46658.1| ATPase beta subunit [Nicotiana sylvestris]
          Length = 498

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           +V QG+  D++GQ I +  ++        V    +   E ++ G  V   G    +    
Sbjct: 47  LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPISVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|110915668|gb|ABH02622.1| ATP synthase beta subunit [Mibora minima]
          Length = 472

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 195 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|153811165|ref|ZP_01963833.1| hypothetical protein RUMOBE_01556 [Ruminococcus obeum ATCC 29174]
 gi|149832663|gb|EDM87747.1| hypothetical protein RUMOBE_01556 [Ruminococcus obeum ATCC 29174]
          Length = 460

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 16/323 (4%)

Query: 51  HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVI 106
           H    +  +G++I I  D   I      + +SLG+    L  H     +SP     GR  
Sbjct: 33  HMDDGTQKIGRIIEIYEDKAVIQVFEGTDNMSLGNTHTRLTGHPMEIGLSPE--ILGRTF 90

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+PIDG  ++   ++++ I       + R+       TGI  ID  T L  GQ++ +
Sbjct: 91  NGIGQPIDGLGAITP-EVNLNINGLPLNPVTREYPRNYINTGISAIDGLTTLIRGQKLPI 149

Query: 167 FAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
           F+G+G+    L +   +       SD    ++ + +G +      F   +        VV
Sbjct: 150 FSGNGLPHDKLAAQIVQQASLGGDSDENFAIVFAAMGVKYDVAEFFRRTFEESGASDHVV 209

Query: 220 VVATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +       P++ R + P  A+T AEY +  KG ++L+IL  IT F  ++RE++++ GE+P
Sbjct: 210 MFLNLANDPVVERLLTPKIALTAAEYLAFEKGMHILVILTDITSFCEAMREVSSSKGEIP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +GYP  ++SEL  L ER G  +   G++T +  + +  D+   PI D    I +G IV
Sbjct: 270 SRKGYPGYLYSELATLYERAGIVQGGTGSVTQIPILTMPNDDITHPIPDLTGYITEGQIV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRL 360
           L+R L  +  YPP++ L S+SRL
Sbjct: 330 LDRQLHGQAIYPPINVLPSLSRL 352


>gi|119350559|gb|ABL63230.1| AtpB [Asterochloris magna]
          Length = 391

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   D S  I    P  ++       F++GI+V+D+  P   G 
Sbjct: 39  GRIFNVLGEPVDNLGPVDNKD-SFPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPYRRGG 97

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GDN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 98  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDSSN 157

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 217

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 218 ALLGRMPSAVGYQPTLATEMGCLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R+LA +G YP VDPL S S +       DE      ++   + R++E +DI
Sbjct: 276 HLDATTVLSRALASKGIYPAVDPLDSTSTMLQPWIVGDEHYDCAQNVKQTLQRYKELQDI 335

Query: 390 RLIGG 394
             I G
Sbjct: 336 IAILG 340


>gi|37543307|gb|AAL92718.1| ATP synthase beta subunit [Chaetosphaeridium sp. 7c2]
 gi|37543309|gb|AAL92719.1| ATP synthase beta subunit [Chaetosphaeridium sp. 539a3]
          Length = 402

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G ++  + S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 40  LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 153

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 154 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 211

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 212 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 269

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 270 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 328

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 329 QRYKELQDIIAILG 342


>gi|15425576|emb|CAC60327.1| ATP synthase beta subunit [Escallonia rubra]
          Length = 462

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 69  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 125

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 126 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 184

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 185 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 242

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 243 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 300

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 301 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 360

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 361 QRYKELQDIIAILG 374


>gi|75339191|sp|Q4PLI6|ATPB_BETVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|67527182|gb|AAY68361.1| ATP synthase beta subunit [Beta vulgaris]
          Length = 498

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21633427|gb|AAM52188.1| ATP synthase beta subunit [Maripa repens]
          Length = 487

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 99  GVTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVYEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +  S +  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|21633437|gb|AAM52193.1| ATP synthase beta subunit [Poranopsis paniculata]
          Length = 490

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D    LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGKPVD---HLGPVDTNTTSHIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 218 GVINEETIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 275

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 276 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 333

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 334 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 393

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 394 QRYKELQDIIAILG 407


>gi|7708300|emb|CAB90077.1| ATP synthase beta subunit [Escallonia sp. 'Chase 2499 K']
          Length = 470

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 199

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 200 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 257

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 258 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 315

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 316 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 375

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 376 QRYKELQDIIAILG 389


>gi|257852976|gb|ACV71499.1| ATP synthase beta subunit [Tricliceras longipedunculatum]
          Length = 377

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 141/263 (53%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE 201
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+       +  +  V + + VGER RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAYGGVSVFAGVGERTRE 88

Query: 202 ----VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
                RE  E  +   +NL +S V  V    +E P  R    LTA+TIAEYF      +V
Sbjct: 89  GNDLYREMKESGVINQENLTESKVALVYGQMNEPPGARMRVALTALTIAEYFRDINKQSV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  +    +   +
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQRQVVGETHYE 266

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 267 TAQRVKQTLQRYKELQDIIAIMG 289


>gi|149384375|gb|ABR25010.1| ATP synthase beta chain [Anemia rotundifolia]
          Length = 426

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  + 
Sbjct: 155 NEQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|150005509|ref|YP_001300253.1| F0F1 ATP synthase subunit beta [Bacteroides vulgatus ATCC 8482]
 gi|212695016|ref|ZP_03303144.1| hypothetical protein BACDOR_04554 [Bacteroides dorei DSM 17855]
 gi|237710548|ref|ZP_04541029.1| F0F1 ATP synthase subunit beta [Bacteroides sp. 9_1_42FAA]
 gi|237727044|ref|ZP_04557525.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D4]
 gi|254884058|ref|ZP_05256768.1| ATP synthase F1 sector subunit beta [Bacteroides sp. 4_3_47FAA]
 gi|265750324|ref|ZP_06086387.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_33FAA]
 gi|294778711|ref|ZP_06744130.1| ATP synthase F1, beta subunit [Bacteroides vulgatus PC510]
 gi|319640732|ref|ZP_07995445.1| ATP synthase subunit beta [Bacteroides sp. 3_1_40A]
 gi|166201692|sp|A6L4L7|ATPB_BACV8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149933933|gb|ABR40631.1| ATP synthase beta chain [Bacteroides vulgatus ATCC 8482]
 gi|212662332|gb|EEB22906.1| hypothetical protein BACDOR_04554 [Bacteroides dorei DSM 17855]
 gi|229433900|gb|EEO43977.1| F0F1 ATP synthase subunit beta [Bacteroides dorei 5_1_36/D4]
 gi|229455270|gb|EEO60991.1| F0F1 ATP synthase subunit beta [Bacteroides sp. 9_1_42FAA]
 gi|254836851|gb|EET17160.1| ATP synthase F1 sector subunit beta [Bacteroides sp. 4_3_47FAA]
 gi|263237220|gb|EEZ22670.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_33FAA]
 gi|294447367|gb|EFG15948.1| ATP synthase F1, beta subunit [Bacteroides vulgatus PC510]
 gi|317387544|gb|EFV68410.1| ATP synthase subunit beta [Bacteroides sp. 3_1_40A]
          Length = 511

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 165/328 (50%), Gaps = 46/328 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+ +DG   L K + +  I  + P       V++   TGI+VID+  P   G 
Sbjct: 95  GRLMNVVGEAVDGMRPLSK-EGAFPIHREPPKFDELSTVQEVLFTGIKVIDLLEPYSKGG 153

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 211

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248
           G+  KKS+                     +V    +E P  R    L+ +T+AE F  + 
Sbjct: 212 GEEFKKSMEEGHWDLSKVDYNEVEKSQATLVYGQMNEPPGARSSIALSGLTVAESFRDRK 271

Query: 249 -GD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
            GD     ++L  +D+I RF  +  E++   G +P A GY  ++ +E+ ++ ERI  +  
Sbjct: 272 NGDSNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TST 329

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D
Sbjct: 330 KNGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILD 389

Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDI 389
                 E   V+  +  ++ R +E +DI
Sbjct: 390 PLIVGQEHYDVAQRVKQILQRNKELQDI 417


>gi|37720965|gb|AAN32485.1| ATP synthase beta subunit [Palisota bogneri]
          Length = 484

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  ++  I    P  +  +   K F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---DLGPVDTRITSPIHRSAPAFIQLETKLKIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +   A   +    +     R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGAKHYETAQRVKQTSQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|12004117|gb|AAG43898.1|AF213767_1 ATP synthase beta subunit [Primula meadia]
          Length = 404

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 21  GATLGRIFNVLGDPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 77

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 78  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 137

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 138 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 197

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 198 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 255

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 256 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIGGEEHYETAQRVKETLQRY 315

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 316 KELQDIIAILG 326


>gi|7708147|emb|CAB89956.1| ATP synthase beta subunit [Androsace spinulifera]
          Length = 478

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+
Sbjct: 84  LRVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIK 140

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 141 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 200

Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 201 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 260

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D
Sbjct: 261 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 318

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 319 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 378

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 379 ETLQRYKELQDIIAILG 395


>gi|60391817|sp|P69369|ATPB_NICBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|60391818|sp|P69370|ATPB_NICPL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11746|emb|CAA43609.1| ATPase subunit beta [Nicotiana quadrivalvis var. bigelovii]
 gi|11757|emb|CAA43613.1| ATPase subunit beta [Nicotiana plumbaginifolia]
          Length = 498

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|290490152|gb|ADD31483.1| ATP synthase CF1 beta subunit protein [Lonicera japonica]
          Length = 498

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKNHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|194033156|ref|YP_002000494.1| ATP synthase CF1 beta subunit [Brachypodium distachyon]
 gi|193075564|gb|ACF08647.1| ATPase beta subunit [Brachypodium distachyon]
          Length = 498

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMRESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|111283712|gb|ABH09206.1| ATPase beta subunit [Balantiopsis diplophylla]
          Length = 426

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 26/317 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 48  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAP 104

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 105 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 164

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 165 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 224

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 225 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 282

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R+
Sbjct: 283 ATTFAHLDATTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 341

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 342 KELQDIIAI----PGLD 354


>gi|15425586|emb|CAC60320.1| ATP synthase beta subunit [Moschopsis rosulata]
          Length = 478

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G D++       +       GR
Sbjct: 46  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 105

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 106 IFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 163 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 222

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 223 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 282

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 283 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 340

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 341 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 400

Query: 390 RLIGG 394
             I G
Sbjct: 401 IAILG 405


>gi|8439470|emb|CAB89934.1| ATP synthase beta subunit [Melianthus major]
          Length = 484

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIIAILG 400


>gi|14718230|gb|AAK72853.1| ATP synthase beta subunit [Spigelia marilandica]
          Length = 492

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 98  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 156

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 157 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 216

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 217 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 276

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 277 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 334

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 335 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 394

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 395 LQDIIAILG 403


>gi|46360704|gb|AAS89133.1| ATP synthase beta subunit [Petalophyllum ralfsii]
          Length = 382

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 2   LGRIFNVLGEPVDNLGPVDSGTTSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 59

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S  G  G   RE  + Y+          
Sbjct: 60  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSXFGGVGERTREGNDLYMEMKESGVINE 119

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 120 QNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 179

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 180 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 237

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 238 FAHLDATXVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 296

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 297 QDIIAILG 304


>gi|305671697|gb|ADM63158.1| ATP synthase beta subunit [Azorella caespitosa]
          Length = 489

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S+   I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTSITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|304440720|ref|ZP_07400604.1| V-type ATP synthase, subunit B [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304370907|gb|EFM24529.1| V-type ATP synthase, subunit B [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 458

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 168/317 (52%), Gaps = 15/317 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDL-VFHWGR-FRISPSACWCGRVINALGKPID-GD 116
           G+VI +N D   +      + I+L +  V   GR   +  S    GR+ + LG+PID G 
Sbjct: 42  GRVIEVNGDKAMVQIFEGSQGINLPETKVRFLGRPLELGVSPDMIGRIFDGLGQPIDNGP 101

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + K  L +   S + PA +R    +  +TGI  ID    L  GQ++ +F+G+G+  + 
Sbjct: 102 KIIPKMKLDIN-GSAINPA-SRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGAGLPHNN 159

Query: 177 LLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           + +  AR       +D F  V+ + +G    E + FI+D+     + ++V+ +  +D+  
Sbjct: 160 VAAQIARQARVLGTNDKF-AVVFAAMGITFEEAQYFIDDFTETGAIDRAVLFMNLADDPA 218

Query: 229 ILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R   P  A+T AEY + + G +VL+I+  +T +A ++RE++    E+P  RGYP  ++
Sbjct: 219 IERLATPKMALTCAEYLAFEMGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLY 278

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++L  + ER G  +   G+IT +  + +  D+   PI D    I +G I+L+R L ++G 
Sbjct: 279 TDLSTIYERAGRIKGRDGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRDLYKQGI 338

Query: 348 YPPVDPLASVSRLADKA 364
            PP++ + S+SRL DK 
Sbjct: 339 EPPINAIPSLSRLKDKG 355


>gi|113910756|gb|ABI48110.1| ATPase beta subunit [Targionia hypophylla]
          Length = 456

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TG
Sbjct: 58  GPLSVPVGEATLGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLAIFETG 114

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 115 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 174

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
           Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +
Sbjct: 175 YMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFI 234

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 235 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 292

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   
Sbjct: 293 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 351

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 352 GVKQTLQRYKELQDIIAILG 371


>gi|99640671|emb|CAJ45111.1| putative beta subunit of chloroplast ATP synthase [Azolla pinnata]
          Length = 395

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + + ++   I    P           F+TGI+V+D+  P   G
Sbjct: 7   LGRIFNVLGEPVDNMGPV-ESNIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 65

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +
Sbjct: 66  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEE 125

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E+
Sbjct: 126 NLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEV 185

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 186 SALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTF 243

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETR 387
           + LD   VL+R  A +G YP VDPL S S +  + W   A+  +    +   + R++E +
Sbjct: 244 AHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKELQ 302

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 303 DIIAILG 309


>gi|22651734|gb|AAM26939.1| ATP synthase beta subunit [Drosophyllum lusitanicum]
          Length = 476

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|110227086|ref|YP_665565.1| ATP synthase beta subunit [Populus alba]
 gi|118573717|sp|Q14FF0|ATPB_POPAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|109945524|dbj|BAE97212.1| ATP synthase beta subunit [Populus alba]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|33327753|gb|AAQ09240.1| ATP synthase beta subunit [Hydrangea macrophylla]
          Length = 495

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|14717984|gb|AAK72734.1| ATP synthase beta subunit [Callitriche heterophylla]
          Length = 483

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|6687199|emb|CAB64877.1| ATP synthase beta subunit [Callitriche heterophylla]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|28188325|gb|AAL92542.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 402

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|281423290|ref|ZP_06254203.1| ATP synthase F1, beta subunit [Prevotella oris F0302]
 gi|281402626|gb|EFB33457.1| ATP synthase F1, beta subunit [Prevotella oris F0302]
          Length = 508

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 45/332 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR++N +GKPIDG + L   D+     + +  P  ++    K    TGI+VID+  P   
Sbjct: 95  GRMMNVIGKPIDGMEEL---DMQGAYPIHRAAPTFDQLSTHKEMLATGIKVIDLLEPYMK 151

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL------- 210
           G +IG+F G+G+GK+ L+     +         + + VGER RE  + + D L       
Sbjct: 152 GGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLESGVIKY 211

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  +K++                     +V    +E P  R    L+ +T+AE F   G
Sbjct: 212 GEAFRKAMEEGKWDLSLVDKKELAESQATLVYGQMNEPPGARASVALSGLTVAEEFRDHG 271

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +
Sbjct: 272 GKNGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTK 329

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  S LD    L+R +AE G YP VDPL S SR+ D 
Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFSHLDATTELSRKIAELGIYPAVDPLGSTSRILDP 389

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                        +  L+ R+ E +DI  I G
Sbjct: 390 LIVGKAHYDCAQRVKQLLQRYNELQDIIAILG 421


>gi|156573703|gb|ABU85184.1| ATP synthase CF1 beta subunit [Anethum graveolens]
          Length = 459

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 65  GTTLGRIFNVLGEPVD---NLGSVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAKRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|110915688|gb|ABH02632.1| ATP synthase beta subunit [Polypogon monspeliensis]
          Length = 490

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|99640416|emb|CAJ45073.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           hooglandii]
          Length = 493

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 163/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|18075919|emb|CAD11916.1| ATP synthase beta subunit [Forgesia racemosa]
          Length = 458

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 180

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 181 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 238

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 239 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 296

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 297 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 356

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 357 QRYKELQDIIAILG 370


>gi|28188333|gb|AAL92546.1| ATP synthase beta subunit [Chaetosphaeridium globosum]
          Length = 402

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G ++  + S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 40  LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 153

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E+ LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 154 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 211

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 212 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 269

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 270 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 328

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 329 QRYKELQDIIAILG 342


>gi|212896638|gb|ACJ38522.1| membrane-bound ATP synthase subunit B [Lespedeza cuneata]
          Length = 466

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 30  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|189162278|ref|YP_001936524.1| ATP synthase CF1 beta subunit [Fagopyrum esculentum subsp.
           ancestrale]
 gi|166065364|gb|ABY79739.1| ATP synthase CF1 beta subunit [Fagopyrum esculentum subsp.
           ancestrale]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R+LA +G YP VDPL S S +       +E  K    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|160430737|gb|ABX44296.1| ATP synthase subunit beta [Physalis longifolia var. subglabrata]
          Length = 343

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 20/305 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 ETRDI 389
           E +DI
Sbjct: 335 ELQDI 339


>gi|6689002|emb|CAB65349.1| ATP synthase beta subunit [Pentas lanceolata]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004115|gb|AAG43897.1|AF213766_1 ATP synthase beta subunit [Douglasia nivalis]
          Length = 487

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+
Sbjct: 98  LRVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIK 154

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 155 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 214

Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 215 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 274

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D
Sbjct: 275 IFRFXQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 332

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 333 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 392

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 393 ETLQRYKELQDIIAILG 409


>gi|210160947|gb|ACJ09360.1| ATP1 [Phytophthora sojae]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 156/308 (50%), Gaps = 19/308 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+ +D    +     +  I +  P    +    +   TG++V+D+  P   G 
Sbjct: 107 GRIMNVIGESVDERGPINAKRYA-PIHTSAPLLTEQGSGAEILVTGMKVVDLLAPYAKGG 165

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214
           +IG+F G+G+GK+ ++     +   +   +S+   VGER RE  +   + +   +     
Sbjct: 166 KIGLFGGAGVGKTVVIMELINNVANNHGGVSVFAGVGERTREGNDLYYEMIESGVIKINE 225

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  
Sbjct: 226 DGTTTGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFTQACS 285

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   +
Sbjct: 286 EVSALLGRIPSAVGYQPTLATDLGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAT 343

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386
             S LD   VL+R ++E G YP VDPL S SR+ D      E   V+  T  L+  ++  
Sbjct: 344 TFSHLDATTVLSRQISELGIYPAVDPLDSKSRMLDPRIIGQEHYDVARATQKLLQDYKGL 403

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 404 QDIIAILG 411


>gi|89242544|gb|ABD64630.1| ATPase beta subunit [Philodendron hederaceum var. oxycardium]
          Length = 436

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I++  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTVGQQIQVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 63  IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 119

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 120 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 179

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 180 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 239

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 240 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 298 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDI 357

Query: 390 RLIGG 394
             I G
Sbjct: 358 IAILG 362


>gi|6689074|emb|CAB65380.1| ATP synthase beta subunit [Roridula gorgonias]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTDRTWPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 220

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +        E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLNSTSTMLQPQIVGKEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21633389|gb|AAM52169.1| ATP synthase beta subunit [Calycobolus nutans]
          Length = 487

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D   S+   + S  I    P  +        F+TGI+V+D+  P 
Sbjct: 99  GSTLGRIFNVLGEPVDNLGSVDT-NTSSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 157

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 158 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 217

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 218 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 277

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 278 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 335

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 336 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 395

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 396 LQDIIAILG 404


>gi|20467383|gb|AAL27822.1| ATPase beta subunit [Ephedra sp. CR08]
          Length = 435

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 82  LGRIFNVLGEPVD---NLGPIDTSTTFXIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         +   VGER  E  +   +     +  
Sbjct: 139 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTXEGNDLYMEMKESGVIN 198

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 199 EKNIIESKVALVYGQMNEPPXARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 259 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TFTKKGSITSIQAVYVPADDLXDPAPAT 316

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 317 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 376

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 377 QDIIAILG 384


>gi|14717946|gb|AAK72715.1| ATP synthase beta subunit [Asteropeia micraster]
          Length = 483

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 157/306 (51%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 387

Query: 384 EETRDI 389
           +E +DI
Sbjct: 388 KELQDI 393


>gi|55056902|emb|CAF21952.1| ATP synthase beta subunit [Cedrus libani]
          Length = 462

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 324 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 382

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI  I    PG+D
Sbjct: 383 YKELQDIIAI----PGLD 396


>gi|305671673|gb|ADM63146.1| ATP synthase beta subunit [Pterocephalodes hookeri]
          Length = 478

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 86  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 143 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 201

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 202 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGQKHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|212896666|gb|ACJ38536.1| membrane-bound ATP synthase subunit B [Ophrestia radicosa]
          Length = 461

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|195183484|dbj|BAG66957.1| ATP synthase beta subunit [Decorsella paradoxa]
          Length = 489

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I+   P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPILRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|156530219|gb|ABU75206.1| AtpB [Soulamea sp. JWC-20007]
          Length = 470

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ KS V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNISKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|119367966|dbj|BAF40441.1| ATP synthase beta subunit [Montrouziera sphaeroidea]
          Length = 489

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110456744|gb|ABG74839.1| ATPase beta subunit [Menodora longiflora]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGPEHYEIAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21684925|emb|CAD11589.1| ATP synthase beta subunit [Leersia oryzoides]
          Length = 497

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|66276255|gb|AAY44142.1| ATP synthase beta subunit [Anisophyllea corneri]
          Length = 486

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|320454994|dbj|BAJ65643.1| ATP synthase beta subunit [Metzgeria furcata]
          Length = 492

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVNASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 220 INEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|299140470|ref|ZP_07033608.1| ATP synthase F1, beta subunit [Prevotella oris C735]
 gi|298577436|gb|EFI49304.1| ATP synthase F1, beta subunit [Prevotella oris C735]
          Length = 508

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 45/332 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR++N +GKPIDG + L   D+     + +  P  ++    K    TGI+VID+  P   
Sbjct: 95  GRMMNVIGKPIDGMEEL---DMQGAYPIHRAAPTFDQLSTHKEMLATGIKVIDLLEPYMK 151

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL------- 210
           G +IG+F G+G+GK+ L+     +         + + VGER RE  + + D L       
Sbjct: 152 GGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLESGVIKY 211

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  +K++                     +V    +E P  R    L+ +T+AE F   G
Sbjct: 212 GEAFRKAMEDGKWDLSLVDKKELAESQATLVYGQMNEPPGARASVALSGLTVAEEFRDHG 271

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +
Sbjct: 272 GKNGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTK 329

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  S LD    L+R +AE G YP VDPL S SR+ D 
Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFSHLDATTELSRKIAELGIYPAVDPLGSTSRILDP 389

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                        +  L+ R+ E +DI  I G
Sbjct: 390 LIVGKAHYDCAQRVKQLLQRYNELQDIIAILG 421


>gi|89574035|gb|ABD77243.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Equus caballus]
          Length = 318

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 139/261 (53%), Gaps = 16/261 (6%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201
           TGI+V+D+  P     +IG+F G+G+GK+ L+    +  A++     V    VGER RE 
Sbjct: 6   TGIKVVDLLAPYAKAGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64

Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
                E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL
Sbjct: 65  NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E  ++ 
Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVA 242

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +  ++  ++  +DI  I G
Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263


>gi|7708493|emb|CAB89941.1| ATP synthase beta subunit [Menyanthes trifoliata]
          Length = 461

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 79  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 196 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 255

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 256 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 313

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       DE    + +    + R++
Sbjct: 314 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYDTAQMVKQTLQRYK 373

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 374 ELQDIIAILG 383


>gi|28188331|gb|AAL92545.1| ATP synthase beta subunit [Coleochaete sp. 18b3]
          Length = 402

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKQTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|121605235|ref|YP_982564.1| F0F1 ATP synthase subunit beta [Polaromonas naphthalenivorans CJ2]
 gi|190358236|sp|A1VPR5|ATPB2_POLNA RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|120594204|gb|ABM37643.1| ATP synthase F1, beta subunit [Polaromonas naphthalenivorans CJ2]
          Length = 474

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 144/274 (52%), Gaps = 9/274 (3%)

Query: 123 DLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           D+    + + PPA+ R+      F TGI+VID+  PL  G + G+F G+G+GK+ LL+  
Sbjct: 111 DIQWRSVHRAPPALARRSTRSEVFVTGIKVIDVLLPLERGGKAGLFGGAGVGKTVLLTEM 170

Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLT 237
             +    +  IS+   +GER RE  E   D     +  S+V+V    +E P  R      
Sbjct: 171 IHNMVGHQEGISIFCGIGERCREGEELYRDMKDAGVLPSMVMVFGQMNEPPGSRFRVGHA 230

Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF   +  +VLL++D+I RF  +  E++   G++P   GY  ++ +EL  L ER
Sbjct: 231 ALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEVSGLMGQMPSRLGYQPTMGTELSGLEER 290

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G IT++ +V V  D+  DP A    S L   IVL+R  A EG +P +DPL S
Sbjct: 291 I--ANTDSGAITSIQAVYVPADDFTDPAAVHTFSHLSASIVLSRKRASEGLFPAIDPLQS 348

Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            S++A      +    L   +   + ++ + +DI
Sbjct: 349 SSKMATPGIVGERHYALAQEIRRTLAQYAQLKDI 382


>gi|332105859|gb|AEE01392.1| ATP synthase beta chain [Tilia americana]
          Length = 493

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I I  ++        V    +   E +  G  V   G    +       GR
Sbjct: 45  KGRDTVGQQINITCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 104

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 105 IFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 161

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 162 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 221

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 222 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 281

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 282 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 339

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 340 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 399

Query: 390 RLIGG 394
             I G
Sbjct: 400 IAILG 404


>gi|110915710|gb|ABH02643.1| ATP synthase beta subunit [Vulpia microstachys]
          Length = 490

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATXGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6687627|emb|CAB65030.1| ATP synthase beta subunit [Gustavia superba]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|5758906|gb|AAD50880.1| ATP synthase beta subunit [Phenakospermum guyannense]
          Length = 496

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 153/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF       VLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQKVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTSQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|123325687|gb|ABM74468.1| ATP synthase beta subunit [Microcitrus australis]
          Length = 466

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGXDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDN-VLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    +  VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQXVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEXYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|37543305|gb|AAL92717.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 402

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|20467411|gb|AAL27836.1| ATPase beta subunit [Cedrus libani]
          Length = 433

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 69  GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 125

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 126 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 185

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 186 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 245

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 246 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 303

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 304 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 362

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI  I    PG+D
Sbjct: 363 YKELQDIIAI----PGLD 376


>gi|62902827|gb|AAY19328.1| ATP synthase beta subunit [Parnassia tenella]
          Length = 478

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|319940399|ref|ZP_08014749.1| V-type ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV]
 gi|319810455|gb|EFW06797.1| V-type ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV]
          Length = 463

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD- 116
           GQV+ +  D  +V +     G  +    + F      +  S    GR+ N +GKPIDG  
Sbjct: 44  GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFNGMGKPIDGGP 103

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           D L +  L ++  +  P A  R   ++  +TGI  ID    L  GQ++ VF+GSG+    
Sbjct: 104 DILPEKYLDIDGQAINPVA--RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 161

Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR      S+    V+ + +G    E   F+ D      + +S++ +  +++  I
Sbjct: 162 LAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSILFINLANDPAI 221

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  RGYP  +++
Sbjct: 222 ERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYT 281

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+R L   G  
Sbjct: 282 NLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSRDLYNSGYR 341

Query: 349 PPVDPLASVSRLADKA 364
           PP++ L S+SRL DK 
Sbjct: 342 PPINVLPSLSRLKDKG 357


>gi|315222207|ref|ZP_07864114.1| ATP synthase [Streptococcus anginosus F0211]
 gi|315188710|gb|EFU22418.1| ATP synthase [Streptococcus anginosus F0211]
          Length = 463

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD- 116
           GQV+ +  D  +V +     G  +    + F      +  S    GR+ N +GKPIDG  
Sbjct: 44  GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFNGMGKPIDGGP 103

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           D L +  L ++  +  P A  R   ++  +TGI  ID    L  GQ++ VF+GSG+    
Sbjct: 104 DILPEKYLDIDGQAINPVA--RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 161

Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR      S+    V+ + +G    E   F+ D      + +S++ +  +++  I
Sbjct: 162 LAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSILFINLANDPAI 221

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  RGYP  +++
Sbjct: 222 ERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYT 281

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+R L   G  
Sbjct: 282 NLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSRDLYNSGYR 341

Query: 349 PPVDPLASVSRLADKA 364
           PP++ L S+SRL DK 
Sbjct: 342 PPINVLPSLSRLKDKG 357


>gi|257852940|gb|ACV71481.1| ATP synthase beta subunit [Tapura guianensis]
          Length = 490

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|99640659|emb|CAJ45104.1| putative beta subunit of chloroplast ATP synthase [Thyrsopteris
           elegans]
 gi|99640665|emb|CAJ45105.1| putative beta subunit of chloroplast ATP synthase [Thyrsopteris
           elegans]
          Length = 493

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 171/336 (50%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTRFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 400 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|7708272|emb|CAB90057.1| ATP synthase beta subunit [Dichapetalum brownii]
          Length = 478

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 92  GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 150

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 151 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 210

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 211 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 271 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 329 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 388

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 389 LQDIIAILG 397


>gi|241912858|gb|ACS72107.1| AtpB [Gonatostylis vieillardii]
          Length = 489

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|161723294|ref|NP_326067.2| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP]
          Length = 511

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 152/286 (53%), Gaps = 16/286 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDS--LGKGDLSM-EIMSKVPPAMNRQRVEKGFKTGI 149
           + I  S    GR+I+ +G+ +D      +GK    M E  SK           +  +TGI
Sbjct: 99  YSIPISEKLLGRIIDPVGRILDDPTHPLVGKQYAPMIETESKQTEKYKVFPKTQILETGI 158

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKV-IISLVGERGREVRE 204
           +VID+  P+  G + G+  G+G+GK+     L++ F +    D V + S +GER RE  E
Sbjct: 159 KVIDVLLPIPSGGKTGLLGGAGVGKTVVVQELINTFIKHH--DGVSVFSGIGERIREGHE 216

Query: 205 FIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
             E+   LG  L K+  +    +ESP LR  +  T V +AEYF +  G NVLL +D+I R
Sbjct: 217 LWEEAKELG-FLDKTTFIFGQMNESPGLRLRSGFTGVKVAEYFRNNLGKNVLLFMDNIFR 275

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +  +  E+++   + P A GY   + SE+ +L ERI  +    G+IT++ ++ +  D+  
Sbjct: 276 YMQAGSEVSSLLEKTPSAVGYQPMLVSEIGKLQERI--NSNNDGDITSIQAMYIPADDFT 333

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           DP A +  +  D  I+L+R LA EG YP VDPL S S+L    +++
Sbjct: 334 DPAAVAAFAHFDATIILSRQLAAEGLYPAVDPLVSSSKLLSTKFTS 379


>gi|21633305|gb|AAM52127.1| ATP synthase beta subunit [Hewittia sublobata]
 gi|21633307|gb|AAM52128.1| ATP synthase beta subunit [Hewittia scandens]
          Length = 490

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|323715508|gb|ADY04822.1| ATP synthase beta subunit [Gentiana saponaria]
          Length = 483

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|306996341|gb|ADN21390.1| ATP synthase beta subunit [Rhizobium loessense]
          Length = 378

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+P+D    L        I    P  +++    +   TGI+V+D+  P   G
Sbjct: 50  LGRIMNVIGEPVDEAGPLVTAS-KRAIHQDAPSYVDQSTEAQILVTGIKVVDLLAPYAKG 108

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     +
Sbjct: 109 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 167

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
            G    K+ +V    +E P  R    LT +T+AE F  +G +VL  +D+I RF  +  E+
Sbjct: 168 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 227

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   +  
Sbjct: 228 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 285

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +D
Sbjct: 286 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 345

Query: 389 IRLIGG 394
           I  I G
Sbjct: 346 IIAILG 351


>gi|195183509|dbj|BAG66968.1| ATP synthase beta subunit [Isodendrion laurifolium]
          Length = 489

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110915636|gb|ABH02606.1| ATP synthase beta subunit [Festuca rubra]
          Length = 471

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKXTLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|113910956|gb|ABI48210.1| ATPase beta subunit [Juniperus sp. Qiu 96270]
          Length = 448

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +  ++    +TG
Sbjct: 51  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDIKFSILETG 107

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 108 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 166

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 167 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 226

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 227 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 284

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +    E  +   
Sbjct: 285 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGKEHYETAQ 344

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 345 GVKQTLQRYKELQDIIAILG 364


>gi|21633397|gb|AAM52173.1| ATP synthase beta subunit [Bonamia media]
          Length = 484

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 96  GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|15425578|emb|CAC60250.1| ATP synthase beta subunit [Nephrophyllidium crista-galli]
          Length = 479

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE    + +    + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYDTAQMVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|7708542|emb|CAB90093.1| ATP synthase beta subunit [Pittosporum fairchildii]
          Length = 474

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|19033063|gb|AAL83516.1|AF408788_1 ATP synthase beta subunit [Coleochaete orbicularis]
 gi|37543303|gb|AAL92716.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 402

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|302390561|ref|YP_003826382.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermosediminibacter oceani DSM 16646]
 gi|302201189|gb|ADL08759.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermosediminibacter oceani DSM 16646]
          Length = 460

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 13/326 (3%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +  G      GQV+ +N D  +V +     G  I+   + F      +  S    GRV +
Sbjct: 32  IETGDGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSTDMLGRVFD 91

Query: 108 ALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
             G+P D G   + +  L +      P A  R    +  +TGI  ID    L  GQ++ +
Sbjct: 92  GFGRPRDKGPMIIPEKRLDINGSPINPTA--RDYPSEFIQTGISAIDGLNTLVRGQKLPI 149

Query: 167 FAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           F+GSG+  + L +  AR      +D    V+ + +G    E   FI D+     + ++V+
Sbjct: 150 FSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAMGITFEEADYFISDFRRTGAIDRTVL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278
            +  +++  I R   P  A+T AE+ + + D +VL+IL  +T +  ++RE++    E+P 
Sbjct: 210 FINLANDPAIERIATPRMALTCAEFLAFEKDMHVLVILTDMTNYCEALREVSAARKEVPG 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP  ++++L  + ER G     KG+IT +  + +  D+   PI D    I +G I+L
Sbjct: 270 RRGYPGYLYTDLSTIYERAGRIRGRKGSITQIPILTMPEDDKTHPIPDLTGYITEGQIIL 329

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA 364
           +R L  +G YPP+D L S+SRL DK 
Sbjct: 330 SRELHRKGIYPPIDVLPSLSRLKDKG 355


>gi|56675513|emb|CAB44208.2| H(+)-transporting ATP synthase [Keraudrenia hermanniifolia]
          Length = 487

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|4995179|emb|CAB44030.1| H(+)-transporting ATP synthase [Gossypium hirsutum]
          Length = 476

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P
Sbjct: 84  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 141 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 200

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 201 INEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 319 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 378

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 379 ELQDIIAILG 388


>gi|6689562|emb|CAB65490.1| ATP synthase beta subunit [Verbascum thapsus]
          Length = 498

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21633403|gb|AAM52176.1| ATP synthase beta subunit [Neuropeltis acuminata]
          Length = 490

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 20/302 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LGKP+D   +LG  D +    I    P  +        F+TGI+V+D+  P   
Sbjct: 106 GRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIHE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E
Sbjct: 223 ENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRILGEEHYETAQRVKQTLQRYKELQ 400

Query: 388 DI 389
           DI
Sbjct: 401 DI 402


>gi|14718066|gb|AAK72774.1| ATP synthase beta subunit [Greyia radlkoferi]
          Length = 483

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|315147205|gb|EFT91221.1| ATP synthase ab [Enterococcus faecalis TX4244]
          Length = 458

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+ IN D   +        I++ D     + H     +SP     GRV + LG+  D 
Sbjct: 42  GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99

Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
              L    K D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+ SG+
Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155

Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
               L +  AR      S+    V+ + +G    E   F+ED+     + +SV+ +  ++
Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 215

Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP 
Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G     KG++T +  + +  ++   PI D    I +G I+L+R L +
Sbjct: 276 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335

Query: 345 EGRYPPVDPLASVSRLADKA 364
            G  PP+D L S+SRL DK 
Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355


>gi|309322341|ref|YP_003934192.1| ATP synthase CF1 beta chain [Cedrus deodara]
 gi|228017084|gb|ACP51906.1| ATP synthase CF1 beta subunit [Cedrus deodara]
 gi|307683267|dbj|BAJ19575.1| ATP synthase CF1 beta chain [Cedrus deodara]
          Length = 492

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 337 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 395

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI  I    PG+D
Sbjct: 396 YKELQDIIAI----PGLD 409


>gi|184127851|gb|ACC67825.1| ATP synthase beta chain [Marattia douglasii]
          Length = 399

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 127

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 128 NQEKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 187

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 188 SEVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 245

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 246 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 304

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 305 ELQDIIAILG 314


>gi|56675901|emb|CAB89914.2| ATP synthase beta subunit [Ipomoea mauritiana]
          Length = 486

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 99  GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|21633441|gb|AAM52195.1| ATP synthase beta subunit [Dinetus truncatus]
          Length = 487

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 99  GSTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 213

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    VA S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 214 SGVINEETVAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 273

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 274 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 331

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 332 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 391

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 392 RYKELQDIIAILG 404


>gi|7708674|emb|CAB90012.1| ATP synthase beta subunit [Tetracera asiatica]
          Length = 483

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + +  PA  +   +   F TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFXQLDTKLSIFDTGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|18077537|emb|CAC88838.1| atpD beta synthase chain [Pseudomonas aeruginosa]
          Length = 258

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|75338403|sp|Q9TMQ4|ATPB_ORNLO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5758903|gb|AAD50877.1| ATP synthase beta subunit [Ornithogalum longebracteatum]
 gi|30351883|emb|CAD48093.1| ATP synthase beta subunit [Stellarioides sp. MP H608]
          Length = 495

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|325958196|ref|YP_004289662.1| V-type ATP synthase subunit beta [Methanobacterium sp. AL-21]
 gi|325329628|gb|ADZ08690.1| V-type ATP synthase beta chain [Methanobacterium sp. AL-21]
          Length = 463

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 15/309 (4%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++  S    GR+ N  G PIDG   +   D  ++I         R+   +  +TGI  ID
Sbjct: 83  KLGVSPDMLGRIFNGTGVPIDGGPEIIP-DQELDINGNPMNPSAREFPAEFIETGISTID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207
               L  GQ++ +F+GSG+  + L +  AR       +    VI + +G    E   F+ 
Sbjct: 142 GMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVVGEETEFAVIFAAMGITHEEANYFMR 201

Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           D+     L++  V +  +D+  I R + P  A+T AEYF+ + + +VL+IL  +T +  +
Sbjct: 202 DFERTGALERVTVFMNLADDPAIERIITPKMALTTAEYFAFELNMHVLVILTDLTNYCEA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI+    E+P  RGYP  ++++L  + ER G    ++G+IT +  +++  D+   PI 
Sbjct: 262 LREISAARDEVPGRRGYPGYMYTDLATMYERAGRIVGKEGSITQMPILVMPQDDITHPIP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIH 381
           D    I +G IVL+R L  +G YPPVD L S+SRL      +  + ++   VS    L  
Sbjct: 322 DLTGYITEGQIVLSRDLFRKGIYPPVDVLPSLSRLMSGGIGEGQTREDHSGVSD--QLYS 379

Query: 382 RFEETRDIR 390
            + E RD+R
Sbjct: 380 AYAEGRDLR 388


>gi|99640396|emb|CAJ45069.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           capensis]
          Length = 493

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S       P PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|65332600|gb|AAY42224.1| ATP synthase beta subunit [Anisophyllea disticha]
          Length = 479

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSFFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|7708468|emb|CAB89924.1| ATP synthase beta subunit [Lactoris fernandeziana]
          Length = 491

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  +N+GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 43  KGRENIGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 102

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 103 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 160 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 219

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 220 LTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 279

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 280 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 337

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 338 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 397

Query: 390 RLIGG 394
             I G
Sbjct: 398 IAILG 402


>gi|21633297|gb|AAM52123.1| ATP synthase beta subunit [Ipomoea pes-tigridis]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|17367086|sp|Q9TKI7|ATPB_MEDSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5679309|gb|AAD46914.1|AF163770_1 ATP synthase beta subunit [Medicago sativa]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|212896602|gb|ACJ38504.1| membrane-bound ATP synthase subunit B [Amphicarpaea bracteata]
          Length = 470

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 33  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 93  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 209

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 210 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 269

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 327

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 328 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 387

Query: 390 RLIGG 394
             I G
Sbjct: 388 IAILG 392


>gi|222446757|gb|ACM51416.1| ATP synthase CF1 beta subunit [Caulerpa filiformis]
          Length = 453

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N L +P+D  GD S  K      I  + P  ++ +     F+TGI+V+D+  P   
Sbjct: 88  GRIFNVLREPVDNLGDVSDSK---RSSIHREAPAFVDLETTLSIFETGIKVVDLLAPYRR 144

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D
Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVID 203

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AE+F   +  +VLL +D+I RF  +  
Sbjct: 204 EQNLSESKVTLVYGQMNEPPGARMRVALTALTLAEFFRDVQKQDVLLFIDNIFRFVQAGS 263

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ ++ V  D+  DP   +
Sbjct: 264 EVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPAPAT 321

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E
Sbjct: 322 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYNCAQNVQQTLQRYKE 380

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 381 LQDIIAILG 389


>gi|8132536|gb|AAF73294.1| ATP synthase beta subunit [Zamia furfuracea]
          Length = 486

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 175/367 (47%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGQDTAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESGVINEQ 217

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 218 DISRSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 394

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 395 DIIAILG 401


>gi|21633299|gb|AAM52124.1| ATP synthase beta subunit [Merremia dissecta]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|14718147|gb|AAK72812.1| ATP synthase beta subunit [Neurada procumbens]
          Length = 476

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|19033073|gb|AAL83521.1|AF408793_1 ATP synthase beta subunit [Chaetosphaeridium ovalis]
          Length = 402

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D D       ++  I    P           F+TGI+V+D+  P   G
Sbjct: 40  LGRIFNVLGEPVD-DMGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 98

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------E 207
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E
Sbjct: 99  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINE 157

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           + LG++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 158 ENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 215

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 216 SEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 273

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 274 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQRYK 332

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 333 ELQDIIAILG 342


>gi|330836722|ref|YP_004411363.1| V-type ATP synthase beta chain [Spirochaeta coccoides DSM 17374]
 gi|329748625|gb|AEC01981.1| V-type ATP synthase beta chain [Spirochaeta coccoides DSM 17374]
          Length = 474

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 142/271 (52%), Gaps = 9/271 (3%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           +    GRV++ LG+  DG  ++  G    ++         R+      +TGI VID  T 
Sbjct: 100 TEAMLGRVMDGLGRSRDGA-AIPTGTEERDVNGTPINPTAREYPRDFIQTGISVIDAMTT 158

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLG 211
           L  GQ++ +F+G+G+  + L +   R            ++ + +G +    R FI+ +  
Sbjct: 159 LIQGQKLPIFSGNGMDHNKLAAQIVRQAKVRGGKSEFAIVFAAMGVKYDVARYFIDSFEQ 218

Query: 212 DNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
             +   V + ++ +D+  I R + P +A+T+AE+ +  K   VL+I+  +T +  S+REI
Sbjct: 219 AGVLDDVALFLSLADDPSIERTITPRSALTLAEHLAFDKDKQVLVIMTDMTNYCESLREI 278

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +T  GE+P  +GYP  ++S L  L ER G     KG+IT +  + +  D+ + PI D   
Sbjct: 279 STQRGEIPSRKGYPGYLYSNLAELYERSGKIAGRKGSITQLPILTMPNDDISHPIPDLTG 338

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            I +G IV +R+++  G YPP+ PL S+SRL
Sbjct: 339 YITEGQIVFDRTMSGRGIYPPIAPLPSLSRL 369


>gi|225572916|ref|ZP_03781671.1| hypothetical protein RUMHYD_01107 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039729|gb|EEG49975.1| hypothetical protein RUMHYD_01107 [Blautia hydrogenotrophica DSM
           10507]
          Length = 456

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 28/317 (8%)

Query: 98  SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           S    GRV + LG+PID       D+      L M   ++V P       E+  +TG+  
Sbjct: 82  SGDMLGRVFDGLGRPIDDGPEILPDERRDINGLPMNPAARVYP-------EEFIQTGVSA 134

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVRE 204
           ID    L  GQ++ +F+ SG+  + L +  AR       S+ F  V+ + +G    E   
Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGTSEPF-AVVFAAMGITFEESNF 193

Query: 205 FIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRF 262
           F+E +     + ++V+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +
Sbjct: 194 FVESFKETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKNMHVLVILTDITNY 253

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A ++RE++    E+P  RGYP  ++++L  L ER G    + G+IT +  + +  D+   
Sbjct: 254 ADALREVSAARKEVPGRRGYPGYMYTDLATLYERAGRQTGKNGSITMIPILTMPEDDKTH 313

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLT 377
           PI D    I +G I+L+R L   G  PP+D L S+SRL DK        AD    ++ L 
Sbjct: 314 PIPDLTGYITEGQIILSRELYRRGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLF 373

Query: 378 HLIHRFEETRDIRLIGG 394
               R ++ +++  I G
Sbjct: 374 AAYSRGKDAKELMTILG 390


>gi|164566155|gb|ABY61220.1| ATP synthase beta subunit [Marattia laxa]
          Length = 394

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 122

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 123 NQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 241 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 300 ELQDIIAILG 309


>gi|29376066|ref|NP_815220.1| V-type ATP synthase subunit B [Enterococcus faecalis V583]
 gi|227518691|ref|ZP_03948740.1| V family ATP synthase subunit B [Enterococcus faecalis TX0104]
 gi|229545889|ref|ZP_04434614.1| V family ATP synthase subunit B [Enterococcus faecalis TX1322]
 gi|229550082|ref|ZP_04438807.1| V family ATP synthase subunit B [Enterococcus faecalis ATCC 29200]
 gi|255972860|ref|ZP_05423446.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T1]
 gi|255975916|ref|ZP_05426502.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T2]
 gi|256619006|ref|ZP_05475852.1| sodium-transporting two-sector ATPase [Enterococcus faecalis ATCC
           4200]
 gi|256762432|ref|ZP_05503012.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T3]
 gi|256853061|ref|ZP_05558431.1| V-type ATPase [Enterococcus faecalis T8]
 gi|256958917|ref|ZP_05563088.1| sodium-transporting two-sector ATPase [Enterococcus faecalis DS5]
 gi|256961988|ref|ZP_05566159.1| sodium-transporting two-sector ATPase [Enterococcus faecalis
           Merz96]
 gi|256965186|ref|ZP_05569357.1| sodium-transporting two-sector ATPase [Enterococcus faecalis
           HIP11704]
 gi|257078948|ref|ZP_05573309.1| sodium-transporting two-sector ATPase [Enterococcus faecalis JH1]
 gi|257082606|ref|ZP_05576967.1| sodium-transporting two-sector ATPase [Enterococcus faecalis E1Sol]
 gi|257085244|ref|ZP_05579605.1| sodium-transporting two-sector ATPase [Enterococcus faecalis Fly1]
 gi|257086810|ref|ZP_05581171.1| sodium-transporting two-sector ATPase [Enterococcus faecalis D6]
 gi|257089819|ref|ZP_05584180.1| sodium-transporting two-sector ATPase [Enterococcus faecalis CH188]
 gi|257416036|ref|ZP_05593030.1| sodium-transporting two-sector ATPase [Enterococcus faecalis
           AR01/DG]
 gi|257419235|ref|ZP_05596229.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T11]
 gi|257422684|ref|ZP_05599674.1| V-type ATPase [Enterococcus faecalis X98]
 gi|293382287|ref|ZP_06628226.1| V-type sodium ATPase, B subunit [Enterococcus faecalis R712]
 gi|293389453|ref|ZP_06633910.1| V-type sodium ATPase, B subunit [Enterococcus faecalis S613]
 gi|294779087|ref|ZP_06744498.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis
           PC1.1]
 gi|300861269|ref|ZP_07107356.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis
           TUSoD Ef11]
 gi|307271083|ref|ZP_07552366.1| ATP synthase [Enterococcus faecalis TX4248]
 gi|307273289|ref|ZP_07554535.1| ATP synthase [Enterococcus faecalis TX0855]
 gi|307278499|ref|ZP_07559573.1| ATP synthase [Enterococcus faecalis TX0860]
 gi|307291490|ref|ZP_07571373.1| ATP synthase [Enterococcus faecalis TX0411]
 gi|312900693|ref|ZP_07759990.1| ATP synthase ab [Enterococcus faecalis TX0470]
 gi|312903241|ref|ZP_07762421.1| ATP synthase [Enterococcus faecalis TX0635]
 gi|312907471|ref|ZP_07766462.1| ATP synthase [Enterococcus faecalis DAPTO 512]
 gi|312910089|ref|ZP_07768936.1| ATP synthase [Enterococcus faecalis DAPTO 516]
 gi|312951427|ref|ZP_07770324.1| ATP synthase [Enterococcus faecalis TX0102]
 gi|81722391|sp|Q834X8|VATB_ENTFA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|29343528|gb|AAO81290.1| V-type ATPase, subunit B [Enterococcus faecalis V583]
 gi|227073871|gb|EEI11834.1| V family ATP synthase subunit B [Enterococcus faecalis TX0104]
 gi|229304786|gb|EEN70782.1| V family ATP synthase subunit B [Enterococcus faecalis ATCC 29200]
 gi|229308957|gb|EEN74944.1| V family ATP synthase subunit B [Enterococcus faecalis TX1322]
 gi|255963878|gb|EET96354.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T1]
 gi|255968788|gb|EET99410.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T2]
 gi|256598533|gb|EEU17709.1| sodium-transporting two-sector ATPase [Enterococcus faecalis ATCC
           4200]
 gi|256683683|gb|EEU23378.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T3]
 gi|256711520|gb|EEU26558.1| V-type ATPase [Enterococcus faecalis T8]
 gi|256949413|gb|EEU66045.1| sodium-transporting two-sector ATPase [Enterococcus faecalis DS5]
 gi|256952484|gb|EEU69116.1| sodium-transporting two-sector ATPase [Enterococcus faecalis
           Merz96]
 gi|256955682|gb|EEU72314.1| sodium-transporting two-sector ATPase [Enterococcus faecalis
           HIP11704]
 gi|256986978|gb|EEU74280.1| sodium-transporting two-sector ATPase [Enterococcus faecalis JH1]
 gi|256990636|gb|EEU77938.1| sodium-transporting two-sector ATPase [Enterococcus faecalis E1Sol]
 gi|256993274|gb|EEU80576.1| sodium-transporting two-sector ATPase [Enterococcus faecalis Fly1]
 gi|256994840|gb|EEU82142.1| sodium-transporting two-sector ATPase [Enterococcus faecalis D6]
 gi|256998631|gb|EEU85151.1| sodium-transporting two-sector ATPase [Enterococcus faecalis CH188]
 gi|257157864|gb|EEU87824.1| sodium-transporting two-sector ATPase [Enterococcus faecalis
           ARO1/DG]
 gi|257161063|gb|EEU91023.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T11]
 gi|257164508|gb|EEU94468.1| V-type ATPase [Enterococcus faecalis X98]
 gi|291080232|gb|EFE17596.1| V-type sodium ATPase, B subunit [Enterococcus faecalis R712]
 gi|291081070|gb|EFE18033.1| V-type sodium ATPase, B subunit [Enterococcus faecalis S613]
 gi|294453812|gb|EFG22203.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis
           PC1.1]
 gi|295112937|emb|CBL31574.1| Archaeal/vacuolar-type H+-ATPase subunit B [Enterococcus sp. 7L76]
 gi|300850308|gb|EFK78058.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis
           TUSoD Ef11]
 gi|306497450|gb|EFM66984.1| ATP synthase [Enterococcus faecalis TX0411]
 gi|306504842|gb|EFM74038.1| ATP synthase [Enterococcus faecalis TX0860]
 gi|306510274|gb|EFM79298.1| ATP synthase [Enterococcus faecalis TX0855]
 gi|306512581|gb|EFM81230.1| ATP synthase [Enterococcus faecalis TX4248]
 gi|310626499|gb|EFQ09782.1| ATP synthase [Enterococcus faecalis DAPTO 512]
 gi|310630583|gb|EFQ13866.1| ATP synthase [Enterococcus faecalis TX0102]
 gi|310633117|gb|EFQ16400.1| ATP synthase [Enterococcus faecalis TX0635]
 gi|311289362|gb|EFQ67918.1| ATP synthase [Enterococcus faecalis DAPTO 516]
 gi|311292174|gb|EFQ70730.1| ATP synthase ab [Enterococcus faecalis TX0470]
 gi|315027332|gb|EFT39264.1| ATP synthase [Enterococcus faecalis TX2137]
 gi|315029582|gb|EFT41514.1| ATP synthase [Enterococcus faecalis TX4000]
 gi|315033903|gb|EFT45835.1| ATP synthase [Enterococcus faecalis TX0017]
 gi|315036913|gb|EFT48845.1| ATP synthase [Enterococcus faecalis TX0027]
 gi|315144482|gb|EFT88498.1| ATP synthase [Enterococcus faecalis TX2141]
 gi|315150600|gb|EFT94616.1| ATP synthase ab [Enterococcus faecalis TX0012]
 gi|315152549|gb|EFT96565.1| ATP synthase ab [Enterococcus faecalis TX0031]
 gi|315155828|gb|EFT99844.1| ATP synthase [Enterococcus faecalis TX0043]
 gi|315158004|gb|EFU02021.1| ATP synthase ab [Enterococcus faecalis TX0312]
 gi|315160511|gb|EFU04528.1| ATP synthase ab [Enterococcus faecalis TX0645]
 gi|315166793|gb|EFU10810.1| ATP synthase ab [Enterococcus faecalis TX1341]
 gi|315169660|gb|EFU13677.1| ATP synthase ab [Enterococcus faecalis TX1342]
 gi|315172375|gb|EFU16392.1| ATP synthase ab [Enterococcus faecalis TX1346]
 gi|315575926|gb|EFU88117.1| ATP synthase [Enterococcus faecalis TX0309B]
 gi|315577600|gb|EFU89791.1| ATP synthase [Enterococcus faecalis TX0630]
 gi|315580579|gb|EFU92770.1| ATP synthase [Enterococcus faecalis TX0309A]
 gi|323480660|gb|ADX80099.1| V-type sodium ATPase subunit B [Enterococcus faecalis 62]
 gi|327535067|gb|AEA93901.1| proton (H+) or sodium (Na+) translocating V-type ATPase (V-ATPase),
           subunit B [Enterococcus faecalis OG1RF]
 gi|329571380|gb|EGG53067.1| ATP synthase [Enterococcus faecalis TX1467]
          Length = 458

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+ IN D   +        I++ D     + H     +SP     GRV + LG+  D 
Sbjct: 42  GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99

Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
              L    K D++ E+++ V     R   ++  +TGI  ID    L  GQ++ VF+ SG+
Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155

Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
               L +  AR      S+    V+ + +G    E   F+ED+     + +SV+ +  ++
Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 215

Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP 
Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G     KG++T +  + +  ++   PI D    I +G I+L+R L +
Sbjct: 276 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335

Query: 345 EGRYPPVDPLASVSRLADKA 364
            G  PP+D L S+SRL DK 
Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355


>gi|301062825|ref|ZP_07203423.1| alternate F1F0 ATPase, F1 subunit alpha [delta proteobacterium
           NaphS2]
 gi|300443087|gb|EFK07254.1| alternate F1F0 ATPase, F1 subunit alpha [delta proteobacterium
           NaphS2]
          Length = 551

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           + D  G V+ I  D V I   G  E +S G+ V   GR    P S    GRV++ LG+P+
Sbjct: 67  DPDISGMVLDILPDRVGIILFGPSEAVSAGNQVARSGRVLDVPVSDHLIGRVVDPLGRPM 126

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + + +  + ++ + PP M+R  V K  +TG++V+D   P+  GQR  +      G
Sbjct: 127 DGKGII-EANKRLVVLREAPPIMDRAPVVKPLQTGLKVVDALFPIGRGQRELILGDRQTG 185

Query: 174 KSTL-LSMFARSDCFDKVII-SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           K+ L L         D + I   +G+R   + + + +   +  +  SVV+V   D+ P L
Sbjct: 186 KTALALDAIVNQKGKDVLCIYCAIGQRSSGIAKVVAELEREGAMDYSVVIVVEGDDPPGL 245

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP  A T+ E+F  +G +VL++ D +TR A + R+++      P    +P  +F   
Sbjct: 246 QFIAPYAATTMGEFFMEQGKDVLIVYDDMTRHALAYRQLSLLLRRPPGREAFPGDIFYVH 305

Query: 291 PRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    ++E+  G++TA+     +  N +  I  ++ SI DG I L+  L ++G  
Sbjct: 306 SRLLERSTHLKEERGGGSLTALPIAETEAQNISAYIPTNLISITDGQIYLSPELFQKGVL 365

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P VD   SVSR+  KA     +++   L     +F+E
Sbjct: 366 PAVDVGKSVSRVGGKAQIPAYRQVAGDLRLSYTQFQE 402


>gi|262038362|ref|ZP_06011739.1| V-type sodium ATPase, B subunit [Leptotrichia goodfellowii F0264]
 gi|261747580|gb|EEY35042.1| V-type sodium ATPase, B subunit [Leptotrichia goodfellowii F0264]
          Length = 459

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 164/323 (50%), Gaps = 13/323 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           G+V+ +N D   +        I+L D  + F      +  S    GR+ + LG+P D G 
Sbjct: 42  GRVLEVNGDKAMVQLFESSAGINLKDTKVRFLGKPLSLGVSEDMIGRIFDGLGRPKDNGP 101

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + +  L +  ++  P A  R    +  +TG+  ID    L  GQ++ +F+GSG+  + 
Sbjct: 102 KIIPEKSLDINGVAINPVA--RDYPSEFIQTGVSSIDGLNTLVRGQKLPIFSGSGLPHAE 159

Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR      S     V+   +G    E + FI+D+     + ++V+ +  +D+  I
Sbjct: 160 LAAQIARQARVLGSGSKFAVVFGAIGITFEEAQFFIDDFTKTGAIDRAVLFMNLADDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+IL  +T +  ++RE++    E+P  RGYP  +++
Sbjct: 220 ERIATPRMALTCAEYLAFEKGMHVLVILTDLTNYCEALREVSAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G  + ++G+IT +  + +  D+   PI D    I +G I+L+R L ++   
Sbjct: 280 DLSTIYERAGKIKGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKQNLM 339

Query: 349 PPVDPLASVSRLADKAWSADEKK 371
           PPVD L S+SRL DK    ++ +
Sbjct: 340 PPVDVLPSLSRLKDKGIGKNKTR 362


>gi|257852934|gb|ACV71478.1| ATP synthase beta subunit [Montrouziera cauliflora]
          Length = 497

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|161833651|ref|YP_001597847.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri GWSS]
 gi|152206140|gb|ABS30450.1| ATP synthase F1, beta subunit [Candidatus Sulcia muelleri GWSS]
          Length = 500

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 183/373 (49%), Gaps = 48/373 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GRV N +G  IDG   LG  + S  I + + PP             TGI+VID+  P   
Sbjct: 95  GRVFNVVGNTIDG---LGDLNNSKRISIHRNPPKFEYLSTNIDILYTGIKVIDLVEPYIK 151

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VRE--------- 204
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE         
Sbjct: 152 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 211

Query: 205 ---FIEDYLG----------DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-- 247
              F+ED             + LK  K+  V    +E P  R    L+ +T+AEY+    
Sbjct: 212 GDSFLEDMKNGKWDISKVDKNELKNSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDSF 271

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG +VL  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + G+
Sbjct: 272 RKGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGS 329

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ +V +  D+ +DP   +  S LD   VL+R ++  G YP VDPL+S SR+    + 
Sbjct: 330 ITSIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSIEFI 389

Query: 367 ADEKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSPSDL 424
            ++  L +  +  ++ R++E +DI  I G     +   DK  VH+   +  FL Q P ++
Sbjct: 390 GNDHYLCAQRVKQILQRYQELQDIIAILGIEELSE--EDKIIVHRARRVQRFLSQ-PFNV 446

Query: 425 SSEDVFQEITKKL 437
           + +  F  IT KL
Sbjct: 447 AEQ--FTGITGKL 457


>gi|118917322|dbj|BAF40443.1| ATP synthase beta subunit [Elatine triandra]
          Length = 489

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VIDEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910754|gb|ABI48109.1| ATPase beta subunit [Monoclea forsteri]
          Length = 456

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TG
Sbjct: 58  GPLSVPVGEATLGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETG 114

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 115 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 174

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
           Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +
Sbjct: 175 YMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 234

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 235 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 292

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   
Sbjct: 293 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 351

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 352 GVKQTLQRYKELQDIIAILG 371


>gi|99640685|emb|CAJ45107.1| putative beta subunit of chloroplast ATP synthase [Lygodium
           japonicum]
          Length = 493

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPVD---NLGPVEGGTTFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 399 LQDIIAI----PGLD 409


>gi|14717924|gb|AAK72705.1| ATP synthase beta subunit [Agave ghiesbreghtii]
          Length = 483

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G   R+       GR
Sbjct: 43  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALRVPVGGATLGR 102

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 103 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 160 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 219

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 220 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 279

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 280 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 337

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 338 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 397

Query: 390 RLIGG 394
             I G
Sbjct: 398 IAILG 402


>gi|14717997|gb|AAK72740.1| ATP synthase beta subunit [Celosia argentea]
          Length = 483

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  
Sbjct: 97  GTTLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|62902815|gb|AAY19322.1| ATP synthase beta subunit [Lepuropetalon spathulatum]
          Length = 488

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIIAILG 400


>gi|34582314|sp|Q8MBF7|ATPB_MONCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633463|gb|AAM52206.1| ATP synthase beta subunit [Montinia caryophyllacea]
          Length = 498

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|21633419|gb|AAM52184.1| ATP synthase beta subunit [Dicranostyles villosus]
          Length = 487

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 159/315 (50%), Gaps = 20/315 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVI 152
           ++      GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+
Sbjct: 95  VAVGGATLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVV 151

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL  
Sbjct: 152 DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEM 211

Query: 212 --------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSIT 260
                   +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I 
Sbjct: 212 KESRMINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF 271

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 272 RFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDL 329

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   
Sbjct: 330 TDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQT 389

Query: 380 IHRFEETRDIRLIGG 394
           + R++E +DI  I G
Sbjct: 390 LQRYKELQDIIAILG 404


>gi|18075929|emb|CAD11926.1| ATP synthase beta subunit [Escallonia resinosa]
          Length = 467

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|21633303|gb|AAM52126.1| ATP synthase beta subunit [Merremia vitifolia]
          Length = 486

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 98  GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|16416745|gb|AAL18396.1|AF313549_1 ATP synthase beta chain [Lygodium japonicum]
          Length = 395

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVEGGTTFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 LQDIIAI----PGLD 311


>gi|62902819|gb|AAY19324.1| ATP synthase beta subunit [Parnassia faberi]
          Length = 488

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|8452718|emb|CAB89961.2| ATP synthase beta subunit [Parnassia palustris]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+    G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFXGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|52788863|gb|AAU87401.1| ATP synthase beta chain [Odontosoria chinensis]
          Length = 383

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P  
Sbjct: 5   ATLGRIFNVLGEPVDNLGPVESGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EKNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAISG 309


>gi|283794975|ref|YP_003359366.1| ATPase beta subunit [Olea europaea]
 gi|330850750|ref|YP_004376428.1| ATPase beta subunit [Olea europaea subsp. europaea]
 gi|281428694|gb|ADA69933.1| ATPase beta subunit [Olea europaea]
 gi|291059260|gb|ADD72096.1| ATP synthase CF1 beta subunit [Olea europaea]
 gi|328795440|emb|CBR30322.1| ATPase beta subunit [Olea europaea subsp. europaea]
          Length = 498

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|134093206|ref|YP_001109508.1| ATP synthase CF1 beta subunit [Populus trichocarpa]
 gi|190358701|sp|A4GYR7|ATPB_POPTR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|133712068|gb|ABO36711.1| ATPase beta subunit [Populus trichocarpa]
          Length = 498

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTQITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|18077607|emb|CAD11920.1| ATP synthase beta subunit [Valdivia gayana]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 212

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 213 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 270

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 271 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 328

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 329 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 388

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 389 QRYKELQDIIAILG 402


>gi|18075921|emb|CAD11922.1| ATP synthase beta subunit [Escallonia calcottiae]
 gi|18075923|emb|CAD11923.1| ATP synthase beta subunit [Escallonia illinita]
 gi|18075925|emb|CAD11924.1| ATP synthase beta subunit [Escallonia myrtoidea]
 gi|18075927|emb|CAD11925.1| ATP synthase beta subunit [Escallonia pulverulenta]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|46360697|gb|AAS89130.1| ATP synthase beta subunit [Monoclea gottschei subsp. elongata]
          Length = 382

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR++N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRILNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|28188337|gb|AAL92548.1| ATP synthase beta subunit [Coleochaete nitellarum]
          Length = 400

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 37  ATLGRIFNVLGEPVD---ELGPVDSTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKETLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|62902821|gb|AAY19325.1| ATP synthase beta subunit [Parnassia glauca]
          Length = 488

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|118917354|dbj|BAF40463.1| ATP synthase beta subunit [Trigonopleura malayana]
          Length = 486

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---DLGPVDTLTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|7708286|emb|CAB90071.1| ATP synthase beta subunit [Eucryphia milliganii]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYPRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|5758880|gb|AAD50854.1| ATP synthase beta subunit [Eustrephus latifolius]
          Length = 495

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|28188327|gb|AAL92543.1| ATP synthase beta subunit [Coleochaete pulvinata]
          Length = 396

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVDSTVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|4063528|gb|AAC98322.1| ATP synthase beta subunit [Berrya javanica]
          Length = 456

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|305671627|gb|ADM63123.1| ATP synthase beta subunit [Kolkwitzia amabilis]
 gi|305671635|gb|ADM63127.1| ATP synthase beta subunit [Heptacodium miconioides]
          Length = 489

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKKHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|110915568|gb|ABH02572.1| ATP synthase beta subunit [Agrostis tenerrima]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT + +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITXIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910830|gb|ABI48147.1| ATPase beta subunit [Hymenophyton flabellatum]
          Length = 416

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D         P PA  +   +   F+TGI+V+D+  P
Sbjct: 58  ATLGRIFNVLGEPVD---NLGPVDTVTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 114

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 115 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 173

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 174 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 350

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 351 YKELQDIIAILG 362


>gi|37720947|gb|AAN32476.1| ATP synthase beta subunit [Narthecium ossifragum]
          Length = 489

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 210

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 211 SGVINEKNPAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 270

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 271 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 328

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     
Sbjct: 329 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|21633321|gb|AAM52135.1| ATP synthase beta subunit [Merremia peltata]
          Length = 490

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|32815669|gb|AAP88231.1| ATP synthase beta subunit [Celtis philippensis]
          Length = 457

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|190358733|sp|A8Z6C7|ATPB_SULMW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 496

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 183/373 (49%), Gaps = 48/373 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GRV N +G  IDG   LG  + S  I + + PP             TGI+VID+  P   
Sbjct: 91  GRVFNVVGNTIDG---LGDLNNSKRISIHRNPPKFEYLSTNIDILYTGIKVIDLVEPYIK 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VRE--------- 204
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE         
Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 207

Query: 205 ---FIEDYLG----------DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-- 247
              F+ED             + LK  K+  V    +E P  R    L+ +T+AEY+    
Sbjct: 208 GDSFLEDMKNGKWDISKVDKNELKNSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDSF 267

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG +VL  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + G+
Sbjct: 268 RKGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGS 325

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ +V +  D+ +DP   +  S LD   VL+R ++  G YP VDPL+S SR+    + 
Sbjct: 326 ITSIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSIEFI 385

Query: 367 ADEKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSPSDL 424
            ++  L +  +  ++ R++E +DI  I G     +   DK  VH+   +  FL Q P ++
Sbjct: 386 GNDHYLCAQRVKQILQRYQELQDIIAILGIEELSE--EDKIIVHRARRVQRFLSQ-PFNV 442

Query: 425 SSEDVFQEITKKL 437
           + +  F  IT KL
Sbjct: 443 AEQ--FTGITGKL 453


>gi|110915670|gb|ABH02623.1| ATP synthase beta subunit [Milium vernale]
          Length = 472

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 79  ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 196 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 255

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+    ERI  ++K  G+IT++ +V V  D+  DP  
Sbjct: 256 GSEVSALLGRMPSAVGYQXTLSTEMGSXQERIASTKK--GSITSIQAVYVPADDLTDPAP 313

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 314 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYEIAQRVKETLQRYK 373

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 374 ELQDIIAILG 383


>gi|75326810|sp|Q7H8L9|ATPB_IPOOB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633273|gb|AAM52111.1| ATP synthase beta subunit [Turbina corymbosa]
 gi|21633277|gb|AAM52113.1| ATP synthase beta subunit [Ipomoea obscura]
 gi|21633293|gb|AAM52121.1| ATP synthase beta subunit [Argyreia splendens]
          Length = 490

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633287|gb|AAM52118.1| ATP synthase beta subunit [Turbina oenotheroides]
          Length = 490

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708536|emb|CAB89951.1| ATP synthase beta subunit [Passiflora coccinea]
          Length = 470

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---ELGPVDTRTTSSIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+++AEYF      +VLL +D+I RF  
Sbjct: 201 VINEKNITESKVALVYGQMNEPPGARMRVGLTALSMAEYFRDVNKQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +   ++  K   S+   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGSEHYKTAQSVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|4063556|gb|AAC98336.1| ATP synthase beta subunit [Ochroma pyramidale]
          Length = 456

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|4206564|gb|AAD11713.1| ATP synthase beta subunit [Cneorum pulverulentum]
          Length = 475

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPIDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R++
Sbjct: 329 ATTXAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|14089649|emb|CAC13409.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis]
          Length = 698

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 152/286 (53%), Gaps = 16/286 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDS--LGKGDLSM-EIMSKVPPAMNRQRVEKGFKTGI 149
           + I  S    GR+I+ +G+ +D      +GK    M E  SK           +  +TGI
Sbjct: 286 YSIPISEKLLGRIIDPVGRILDDPTHPLVGKQYAPMIETESKQTEKYKVFPKTQILETGI 345

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKV-IISLVGERGREVRE 204
           +VID+  P+  G + G+  G+G+GK+     L++ F +    D V + S +GER RE  E
Sbjct: 346 KVIDVLLPIPSGGKTGLLGGAGVGKTVVVQELINTFIKHH--DGVSVFSGIGERIREGHE 403

Query: 205 FIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
             E+   LG  L K+  +    +ESP LR  +  T V +AEYF +  G NVLL +D+I R
Sbjct: 404 LWEEAKELG-FLDKTTFIFGQMNESPGLRLRSGFTGVKVAEYFRNNLGKNVLLFMDNIFR 462

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +  +  E+++   + P A GY   + SE+ +L ERI  +    G+IT++ ++ +  D+  
Sbjct: 463 YMQAGSEVSSLLEKTPSAVGYQPMLVSEIGKLQERINSNND--GDITSIQAMYIPADDFT 520

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           DP A +  +  D  I+L+R LA EG YP VDPL S S+L    +++
Sbjct: 521 DPAAVAAFAHFDATIILSRQLAAEGLYPAVDPLVSSSKLLSTKFTS 566


>gi|319902315|ref|YP_004162043.1| ATP synthase F1, beta subunit [Bacteroides helcogenes P 36-108]
 gi|319417346|gb|ADV44457.1| ATP synthase F1, beta subunit [Bacteroides helcogenes P 36-108]
          Length = 506

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + + +  I  + P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDR-EGAYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     ++    +E P  R+   L+ +T+AE F   G
Sbjct: 210 GEEFKKSMEEGNWDLSKVDYNEVAKSQVALIFGQMNEPPGARQSVALSGLTVAESFRDMG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G LP A GY  ++ +E+  + ERI  +   
Sbjct: 270 AETDGPRDILFFIDNIFRFTQAGSEVSALLGRLPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 SGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  ++   +  ++ R +E +DI
Sbjct: 388 HIVGREHYEVAQRVKQILQRNKELQDI 414


>gi|260677426|ref|YP_003208194.1| ATP synthase CF1 beta subunit [Coix lacryma-jobi]
 gi|209361364|gb|ACI43279.1| ATP synthase CF1 beta subunit [Coix lacryma-jobi]
          Length = 498

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E   L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTERGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|123325707|gb|ABM74478.1| ATP synthase beta subunit [Oxanthera sp. V 7758]
          Length = 461

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|21633323|gb|AAM52136.1| ATP synthase beta subunit [Calystegia macrostegia]
          Length = 490

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E+ +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEQYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|6688706|emb|CAB65227.1| ATP synthase beta subunit [Montinia caryophyllacea]
          Length = 498

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|8517408|emb|CAB94295.1| ATP synthase beta subunit [Clavija eggersiana]
          Length = 476

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|62902823|gb|AAY19326.1| ATP synthase beta subunit [Parnassia laxmannii]
          Length = 473

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|33327763|gb|AAQ09245.1| ATP synthase beta subunit [Pittosporum verrucosum]
          Length = 489

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6689000|emb|CAB65354.1| ATP synthase beta subunit [Proboscidea louisianica]
          Length = 498

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRNAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708313|emb|CAB90088.1| ATP synthase beta subunit [Geum sp. 'Chase 2507 K']
          Length = 473

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 89  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 148 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 207

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 208 NEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 267

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 268 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 325

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R++E
Sbjct: 326 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKETLQRYKE 385

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 386 LQDIIAILG 394


>gi|21633317|gb|AAM52133.1| ATP synthase beta subunit [Operculina turpethum]
          Length = 490

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|15425590|emb|CAC60270.1| ATP synthase beta subunit [Phyllachne uliginosa]
          Length = 470

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 77  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 133

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 134 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 193

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 194 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 253

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 254 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 311

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 312 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 371

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 372 ELQDIIAILG 381


>gi|7708576|emb|CAB89978.1| ATP synthase beta subunit [Rhodohypoxis milloides]
          Length = 493

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF H
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVH 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|14718136|gb|AAK72807.1| ATP synthase beta subunit [Mollugo verticillata]
          Length = 483

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 158/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
               GR+ N LG+P+D    +  G  S   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 97  GATLGRIFNVLGEPVDNLGPVDTGTTSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 215 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 332

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 392

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 393 ELQDIIAILG 402


>gi|325188722|emb|CCA23253.1| unnamed protein product putative [Albugo laibachii Nc14]
          Length = 501

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 147/277 (53%), Gaps = 26/277 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR++N +G+P+D      +G ++ +  + +    P +  Q  E     TG++V+D+  P 
Sbjct: 110 GRIMNVIGEPVDE-----RGPINAKHHAPIHASAPLLTEQDSESCVLVTGLKVVDLLAPY 164

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL- 214
             G +IG+F G+G+GK+ ++     +   +   +S+   VGER RE  +   + +   + 
Sbjct: 165 PKGGKIGLFGGAGVGKTVVIMELINNVANNHGGVSVFAGVGERTREGNDLYYEMIESGVI 224

Query: 215 ----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                      K+ +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF 
Sbjct: 225 KINEDGTTKGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFT 284

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP
Sbjct: 285 QACSEVSALLGRIPSAVGYQPTLATDLGALQERI--TSTKKGSITSVQAIYVPADDLTDP 342

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  S LD   VL+R +AE G YP VDPL S SR+
Sbjct: 343 APATTFSHLDATTVLSRQIAELGIYPAVDPLDSKSRI 379


>gi|325569373|ref|ZP_08145529.1| V-type ATP synthase, subunit B [Enterococcus casseliflavus ATCC
           12755]
 gi|325157373|gb|EGC69534.1| V-type ATP synthase, subunit B [Enterococcus casseliflavus ATCC
           12755]
          Length = 465

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I  D  +V I     G  +    + F      +  S    GRV + LG+  DG  
Sbjct: 42  GQVLEIQEDKALVQIFEGTGGINLRESAVRFLGHPLELGVSEQMIGRVFDGLGRVKDGGV 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +      M+I  +V     R   ++  +TGI  ID    L  GQ++ +F+GSG+    L
Sbjct: 102 EIVPEKF-MDINGEVINPAARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160

Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            S  AR        D F  V+ + +G    E   F+ED+     +  SVV +  +++  I
Sbjct: 161 ASQIARQAQVLNSEDDF-AVVFAGIGITFEEAEYFMEDFRQTGAIDHSVVFMNLANDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+I+  +T +  ++REI++   E+P  RGYP  +++
Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISSARREVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            L  L ER G     KG++T +  + +  D+   PI D    I +G I+L+R L + G  
Sbjct: 280 NLSTLYERAGRIRGLKGSVTQLPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKNGIQ 339

Query: 349 PPVDPLASVSRLADKA 364
           PP+D L S+SRL DK 
Sbjct: 340 PPIDVLPSLSRLKDKG 355


>gi|320100289|ref|YP_004175881.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Desulfurococcus mucosus DSM 2162]
 gi|319752641|gb|ADV64399.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Desulfurococcus mucosus DSM 2162]
          Length = 470

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 165/330 (50%), Gaps = 23/330 (6%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
            LGQVI ++ D   I   G   ++ L    + +     RI  S    GRV + LG+PID 
Sbjct: 45  KLGQVIDVSRDATVIQVFGGVADVDLLKSRVKYRGETLRIPVSIDMLGRVFDGLGRPIDN 104

Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
                 +D L      +   S++PP+       +  +TGI  ID    +  GQ++ +F+G
Sbjct: 105 GPRIVPEDYLDINGAPLNPASRLPPS-------EFIETGISAIDGLFSIVRGQKLPIFSG 157

Query: 170 SGIGKSTLLSMFAR-SDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223
           SG+  + + +   R +    K     ++ + +G    +   FIE++      +  V +  
Sbjct: 158 SGLPHNRIAAQIVRQARVLGKEEKFAMVFAAIGVPYDDAMFFIENFRRTGALERTVALIN 217

Query: 224 SDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
           +  SP++ ++A P  A+TIAE+ +   D +VL++L  +T +  ++RE++    E+P  RG
Sbjct: 218 TASSPVIERIATPRVALTIAEHLAWTHDMHVLVVLTDMTFYCEALRELSAAREEVPGRRG 277

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G    +KG++T +  + +  D+   PI D    I +G +VL+R 
Sbjct: 278 YPGYMYTDLATIYERAGRVRGKKGSVTQLPILTMPDDDITHPIPDLTGYITEGQLVLSRQ 337

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           L  +G YPP DPL S+SRL      A + +
Sbjct: 338 LWMKGIYPPFDPLMSLSRLMKDGIGAGKTR 367


>gi|305671683|gb|ADM63151.1| ATP synthase beta subunit [Platysace lanceolata]
          Length = 489

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119350541|gb|ABL63221.1| AtpB [Radiofilum conjunctivum]
          Length = 393

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D    + I    P  ++       F+TGI+V+D+  P  
Sbjct: 38  LGRIFNVLGEPVD---NLGPVDAKDGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYR 94

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 95  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 154

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 155 EENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 214

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       D   +   ++   + R++E 
Sbjct: 273 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDTHYQTAQNVKQTLQRYKEL 332

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 333 QDIIAILG 340


>gi|37543317|gb|AAL92723.1| ATP synthase beta subunit [Coleochaete conchata]
          Length = 388

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 33  LGRIFNVLGEPVD---ELGPVDSTVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 89

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 90  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 149

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 150 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 209

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 210 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 267

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R++E
Sbjct: 268 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRYKE 326

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 327 LQDIIAILG 335


>gi|296875441|ref|ZP_06899514.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC
           15912]
 gi|312866966|ref|ZP_07727177.1| ATP synthase ab C terminal domain protein [Streptococcus
           parasanguinis F0405]
 gi|322390615|ref|ZP_08064130.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC
           903]
 gi|296433508|gb|EFH19282.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC
           15912]
 gi|311097448|gb|EFQ55681.1| ATP synthase ab C terminal domain protein [Streptococcus
           parasanguinis F0405]
 gi|321142694|gb|EFX38157.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC
           903]
          Length = 461

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L +  +H G      GQV+ +  D  +V +     G  +    + F      +  S
Sbjct: 27  HYNELVEIKLHDGTTRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N +GKPIDG   +   +  ++I  +    ++R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFNGMGKPIDGGPEIIP-EKYLDIDGQAINPVSRDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+    L +  AR      S+    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHKELAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRET 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L+R L   G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSRDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|149384457|gb|ABR25051.1| ATP synthase beta chain [Alsophila stelligera]
          Length = 394

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|56236580|gb|AAV84657.1| ATP synthase beta subunit [Agathis australis]
          Length = 410

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D           I    P           F+TGI+V+D+  P 
Sbjct: 34  GATLGRIFNVLGEPVD-DLGPVAARAKSPIHRAAPDFTQLDTKFSIFETGIKVVDLLAPY 92

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL- 214
             G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     + 
Sbjct: 93  RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVI 152

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 153 QEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 212

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 213 SEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 270

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   + R++E
Sbjct: 271 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQRVKQTLQRYKE 330

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 331 LQDIIAILG 339


>gi|16943674|emb|CAD10772.1| atp synthase, beta subunit [Eustrephus latifolius]
          Length = 498

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|21633281|gb|AAM52115.1| ATP synthase beta subunit [Stictocardia tiliifolia]
          Length = 490

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|6467934|gb|AAF13233.1|AF197600_1 ATPase beta subunit [Potamogeton berchtoldii]
          Length = 489

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|91208909|ref|YP_538942.1| ATP synthase CF1 beta subunit [Gossypium hirsutum]
 gi|325210937|ref|YP_004286011.1| ATP synthase CF1 beta subunit [Gossypium thurberi]
 gi|118573540|sp|Q2L917|ATPB_GOSHI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|85687423|gb|ABC73635.1| ATP synthase CF1 beta subunit [Gossypium hirsutum]
 gi|290775799|gb|ADD62295.1| ATP synthase CF1 beta subunit [Gossypium thurberi]
          Length = 498

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|229002314|dbj|BAH57920.1| ATP synthase beta subunit [Potamogeton compressus]
 gi|229002322|dbj|BAH57924.1| ATP synthase beta subunit [Potamogeton obtusifolius]
 gi|229002324|dbj|BAH57925.1| ATP synthase beta subunit [Potamogeton octandrus]
          Length = 491

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|111283726|gb|ABH09213.1| ATPase beta subunit [Goebelobryum unguiculatum]
          Length = 449

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 60  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 116

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 117 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 176

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 177 INEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 236

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 237 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 294

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R+
Sbjct: 295 ATTFAHLDATTVLSRGLAAKGIYPAVDPPDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 353

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 354 KELQDIIAILG 364


>gi|37543313|gb|AAL92721.1| ATP synthase beta subunit [Coleochaete pulvinata]
          Length = 399

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVDSTVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKQTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|21633335|gb|AAM52142.1| ATP synthase beta subunit [Polymeria pusilla]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIXILG 407


>gi|295398371|ref|ZP_06808411.1| V-type ATP synthase, subunit B [Aerococcus viridans ATCC 11563]
 gi|294973324|gb|EFG49111.1| V-type ATP synthase, subunit B [Aerococcus viridans ATCC 11563]
          Length = 460

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 13/317 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           LGQV+++      +   G G  I+L D  + F         S    GRV + LG   D  
Sbjct: 41  LGQVLQVEESRAVVQIYGGGSGINLQDTKVRFQGRPLEFGVSEDMIGRVFDGLGNINDNG 100

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S +I  +    M R   ++  +TGI  ID    L  GQ++ VF+GSG+    
Sbjct: 101 PEI-IAEESRDINGQAINPMARDYPDEFIQTGISTIDHLNTLVRGQKLPVFSGSGLPHKE 159

Query: 177 LLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
           L +  AR        D F  V+ + +G    E   F+E +     + +SV+ +  +D+  
Sbjct: 160 LAAQIARQATVLGDDDQF-AVVFAAMGVTFEEAEYFMESFRETGAIDRSVLFINLADDPS 218

Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R   P  A+T AEY + + D  VL+I+  +T +  ++RE++    E+P  RGYP  ++
Sbjct: 219 IERLATPKIALTAAEYLAYEKDMQVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLY 278

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + L  L ER G  +  KG++T +  + +  D+   PI D    I +G I+L+R L   G 
Sbjct: 279 TNLSTLYERAGRIKGSKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILDRDLDARGI 338

Query: 348 YPPVDPLASVSRLADKA 364
            PP++ L S+SRL DK 
Sbjct: 339 EPPINVLPSLSRLKDKG 355


>gi|158602283|gb|ABW74608.1| ATP synthase beta subunit [Nigella damascena]
          Length = 476

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYETAQRVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|164597807|ref|NP_084663.2| ATP synthase CF1 beta subunit [Oenothera elata subsp. hookeri]
 gi|169142844|ref|YP_001687267.1| ATP synthase beta subunit [Oenothera glazioviana]
 gi|169142929|ref|YP_001687351.1| ATP synthase beta subunit [Oenothera biennis]
 gi|169143015|ref|YP_001687435.1| ATP synthase beta subunit [Oenothera parviflora]
 gi|172045790|sp|Q9MTP7|ATPB_OENEH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|190358691|sp|B0Z4U4|ATPB_OENBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|190358692|sp|B0Z528|ATPB_OENGL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|190358693|sp|B0Z5B2|ATPB_OENPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|159793102|gb|ABW98856.1| ATP synthase beta subunit [Oenothera biennis]
 gi|159895456|gb|ABX10021.1| ATP synthase beta subunit [Oenothera glazioviana]
 gi|159895541|gb|ABX10105.1| ATP synthase beta subunit [Oenothera parviflora]
 gi|162423674|emb|CAB67128.2| ATP synthase beta subunit [Oenothera elata subsp. hookeri]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 151/306 (49%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKETLQRY 398

Query: 384 EETRDI 389
           +E +DI
Sbjct: 399 KELQDI 404


>gi|7582352|gb|AAF64291.1| ATP synthase beta subunit [Eustrephus latifolius]
          Length = 495

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|21633313|gb|AAM52131.1| ATP synthase beta subunit [Operculina pteripes]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|20269412|gb|AAM17933.1| ATP synthase beta subunit [Fouquieria sp. Anderberg s.n.]
          Length = 469

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMAIQESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|7708151|emb|CAB89904.1| ATP synthase beta subunit [Anthericum liliago]
          Length = 480

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 94  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 152

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 153 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 212

Query: 212 --DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S   +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 213 NEKNIAESKVAIVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 272

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 273 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 330

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 331 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|21633309|gb|AAM52129.1| ATP synthase beta subunit [Xenostegia tridentata]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|110456611|gb|ABG74738.1| ATPase beta subunit [Forsythia europaea]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718115|gb|AAK72797.1| ATP synthase beta subunit [Limonium arborescens]
          Length = 472

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPDFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 206

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 207 GVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 266

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 267 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDP 324

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + R
Sbjct: 325 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYETAQRVKETLQR 384

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 385 YKELQDIIAILG 396


>gi|257875183|ref|ZP_05654836.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus
           EC20]
 gi|257809349|gb|EEV38169.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus
           EC20]
          Length = 465

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I  D  +V I     G  +    + F      +  S    GRV + LG+  DG  
Sbjct: 42  GQVLEIQEDKALVQIFEGTGGINLRESAVRFLGHPLELGVSEQMIGRVFDGLGRVKDGGV 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +      M+I  +V     R   ++  +TGI  ID    L  GQ++ +F+GSG+    L
Sbjct: 102 EIVPEKF-MDINGEVINPAARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160

Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            S  AR        D F  V+ + +G    E   F+ED+     +  SVV +  +++  I
Sbjct: 161 ASQIARQAQVLNSEDDF-AVVFAGIGITFEEAEYFMEDFRQTGAIDHSVVFMNLANDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+I+  +T +  ++REI++   E+P  RGYP  +++
Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISSARREVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            L  L ER G     KG++T +  + +  D+   PI D    I +G I+L+R L + G  
Sbjct: 280 NLSTLYERAGRIRGLKGSVTQLPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKNGIQ 339

Query: 349 PPVDPLASVSRLADKA 364
           PP+D L S+SRL DK 
Sbjct: 340 PPIDVLPSLSRLKDKG 355


>gi|227499460|ref|ZP_03929571.1| H(+)-transporting two-sector ATPase [Anaerococcus tetradius ATCC
           35098]
 gi|227218522|gb|EEI83765.1| H(+)-transporting two-sector ATPase [Anaerococcus tetradius ATCC
           35098]
          Length = 581

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 18/279 (6%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P M    +EK F+TG RV+D+F PL  G  + +  G G GK+ L    A+    D +I  
Sbjct: 195 PVMANLPIEKLFETGQRVLDVFFPLAKGGTVAIPGGFGTGKTMLQHQLAQYSDVDIIIYI 254

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ + +E++        G  L +  +++A +   P+  + A + T +T+AEYF
Sbjct: 255 GCGERGNEMTQVLEEFPDLIDPNTGKGLMERTILIANTSNMPVAAREASIYTGITMAEYF 314

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302
              G +V L+ DS +R+A ++REI+    E+P   GYP  + S L +  ER G       
Sbjct: 315 RDMGYDVALMADSSSRWAEALREISGRLEEIPAEEGYPAYLGSRLSQFYERAGYFRNLNG 374

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++T + +V   G + ++P+ ++ R  ++  + L+R LA    YP ++ L S S   +
Sbjct: 375 SYGSVTLIGAVSPSGGDFSEPVTENTRRCVNVFLGLDRKLAYSRHYPAINWLTSYSNYIE 434

Query: 363 KAWSADEKKL-------VSSLTHLIHRFEETRDIRLIGG 394
           K  S  E++L        + L +++   +E R I ++ G
Sbjct: 435 KIRSYYEERLGRDIIAVRNELMNVLLEEDEVRSIMMLVG 473


>gi|189170246|gb|ACD80118.1| ATP synthase beta subunit [Tetraselmis suecica]
          Length = 366

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D +  + I    P  ++       F+TGI+V+D+  P  
Sbjct: 21  LGRIFNVLGQPVD---NLGPVDSTNGLTIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYR 77

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 78  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIQ 137

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 138 ESNLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGA 197

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E
Sbjct: 256 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEEHYSCAQNVKETLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|99640475|emb|CAJ45083.1| putative beta subunit of chloroplast ATP synthase [Culcita
           macrocarpa]
          Length = 395

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 31/337 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLG---- 211
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  + ++E        
Sbjct: 65  GGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V   ++E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQTNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGTYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 301 PQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 333


>gi|21633275|gb|AAM52112.1| ATP synthase beta subunit [Turbina corymbosa]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633319|gb|AAM52134.1| ATP synthase beta subunit [Merremia umbellata]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|6687483|emb|CAB64952.1| ATP synthase beta subunit [Exacum affine]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTLGQSINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|7708474|emb|CAB89923.1| ATP synthase beta subunit [Lavandula bipinnata]
          Length = 483

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|7708616|emb|CAB89980.1| ATP synthase beta subunit [Rheum pinchonii]
          Length = 484

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 212 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R+LA +G YP VDPL S S  L  +       K+   +   + R+
Sbjct: 330 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEAHYKIAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|332707648|ref|ZP_08427676.1| ATP synthase F1 subcomplex beta subunit [Lyngbya majuscula 3L]
 gi|332353557|gb|EGJ33069.1| ATP synthase F1 subcomplex beta subunit [Lyngbya majuscula 3L]
          Length = 482

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 155/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D +    + +    I    P     +     F+TGI+VID+ TP  
Sbjct: 95  ATLGRIFNVLGEPVD-NRGPAESEERFPIHRPAPKLTELETKPSVFETGIKVIDLLTPYR 153

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYL------ 210
            G +IG+F G+G+GK+ ++        +      +   VGER RE  +   + +      
Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATKHGGVSVFGGVGERTREGNDLYNEMMESKVIN 213

Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            D+L +S   +V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  
Sbjct: 214 PDDLNESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +++  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTNEGSITSIQAVYVPADDLTDPAPAT 331

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEET 386
             + LDG  VL+R LA +G YP VDPL S S +   +    D      ++   + R++E 
Sbjct: 332 TFAHLDGTTVLSRGLASKGIYPAVDPLDSNSTMLQPSIVGEDHYGTARAVQATLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|320454976|dbj|BAJ65631.1| ATP synthase beta subunit [Metzgeria americana]
          Length = 492

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 103 ATLGRIFNVLGEPVDDLGPVNAGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|170178344|gb|ACB10591.1| ATP synthase beta subunit [Cornus disciflora]
          Length = 455

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 71  IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 128 KIGLFGGAGVGKTVLIMKLINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 365

Query: 390 RLIGG 394
             I G
Sbjct: 366 IAILG 370


>gi|123325613|gb|ABM74431.1| ATP synthase beta subunit [Citrus halimii]
 gi|123325635|gb|ABM74442.1| ATP synthase beta subunit [x Citrofortunella microcarpa]
 gi|123325659|gb|ABM74454.1| ATP synthase beta subunit [Limonia acidissima]
 gi|123325693|gb|ABM74471.1| ATP synthase beta subunit [Microcitrus papuana]
          Length = 461

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|123325583|gb|ABM74416.1| ATP synthase beta subunit [Bergera koenigii]
 gi|123325655|gb|ABM74452.1| ATP synthase beta subunit [Clausena harmandiana]
          Length = 466

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQGVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|110456643|gb|ABG74762.1| ATPase beta subunit [Jasminum leratii]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  K+   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|167040974|ref|YP_001663959.1| V-type ATP synthase subunit B [Thermoanaerobacter sp. X514]
 gi|300913815|ref|ZP_07131132.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter sp. X561]
 gi|307725499|ref|YP_003905250.1| H+transporting two-sector ATPase alpha/beta subunit
           [Thermoanaerobacter sp. X513]
 gi|238687614|sp|B0K5I9|VATB_THEPX RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|166855214|gb|ABY93623.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Thermoanaerobacter sp. X514]
 gi|300890500|gb|EFK85645.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter sp. X561]
 gi|307582560|gb|ADN55959.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter sp. X513]
          Length = 459

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 26/365 (7%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +  G      GQV+ +N D  +V +     G  I+   + F      +  S    GRV +
Sbjct: 32  IETGSGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFD 91

Query: 108 ALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
            LG+P D      KG +      ++I         R    +  +TGI  ID    L  GQ
Sbjct: 92  GLGRPRD------KGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQ 145

Query: 163 RIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           ++ +F+GSG+  + L +  AR      +D    V+ + +G    E   FI D+     + 
Sbjct: 146 KLPIFSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAMGITFEEADYFISDFRRTGAID 205

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274
           ++V+ +  +++  I R   P  A+T AE+ +  K  +VL+I+  +T +  ++RE++    
Sbjct: 206 RTVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARK 265

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  RGYP  ++++L  + ER G  +  KG+IT +  + +  D+   PI D    I +G
Sbjct: 266 EVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHPIPDLTGYITEG 325

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI 389
            I+L+R L  +G YPP+D L S+SRL DK         D   L++ L     R ++ +++
Sbjct: 326 QIILSRDLYRKGIYPPIDVLPSLSRLKDKGIGQGKTREDHADLMNQLFASYARGKQAKEL 385

Query: 390 RLIGG 394
            +I G
Sbjct: 386 AVILG 390


>gi|33318657|gb|AAQ05212.1| ATP synthase beta subunit [Cedrus deodara]
          Length = 473

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 200 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 318 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 376

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI  I    PG+D
Sbjct: 377 YKELQDIIAI----PGLD 390


>gi|19033067|gb|AAL83518.1|AF408790_1 ATP synthase beta subunit [Coleochaete irregularis]
          Length = 402

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D S +  + +  PA  +   +   F+TGI+ +D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---ELGPVDTSKVSPIHRPAPAFTQLDTKLSIFETGIKAVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESIV 154

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              DNL +S V  V    +  P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INSDNLSESKVALVYGQMNVPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|9799486|gb|AAF98993.1| ATP synthase beta subunit [Paeonia californica]
          Length = 491

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN+GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 46  KGQDNIGQPINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 105

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 106 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 162

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 163 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 222

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 223 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 282

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 283 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 340

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 341 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 400

Query: 390 RLIGG 394
             I G
Sbjct: 401 IAILG 405


>gi|75332769|sp|Q95FL8|ATPB_POPTM RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|14718189|gb|AAK72833.1| ATP synthase beta subunit [Populus tremuloides]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDDLRPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|21633279|gb|AAM52114.1| ATP synthase beta subunit [Lepistemon owariensis]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|323715476|gb|ADY04806.1| ATP synthase beta subunit [Hydrangea bretschneideri]
          Length = 485

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 93  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 151

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 389

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 390 LQDIIAILG 398


>gi|270313037|gb|ACZ73600.1| ATP synthase beta subunit [Harrisonia abyssinica]
          Length = 463

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|257865569|ref|ZP_05645222.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus
           EC30]
 gi|257871906|ref|ZP_05651559.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus
           EC10]
 gi|257799503|gb|EEV28555.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus
           EC30]
 gi|257806070|gb|EEV34892.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus
           EC10]
          Length = 465

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I  D  +V I     G  +    + F      +  S    GRV + LG+  DG  
Sbjct: 42  GQVLEIQEDKALVQIFEGTGGINLRESAVRFLGHPLELGVSEQMIGRVFDGLGRVKDGGV 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +      M+I  +V     R   ++  +TGI  ID    L  GQ++ +F+GSG+    L
Sbjct: 102 EIVPEKF-MDINGEVINPAARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160

Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            S  AR        D F  V+ + +G    E   F+ED+     +  SVV +  +++  I
Sbjct: 161 ASQIARQAKVLNSEDDF-AVVFAGIGITFEEAEYFMEDFRQTGAIDHSVVFMNLANDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AEY +  KG +VL+I+  +T +  ++REI++   E+P  RGYP  +++
Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISSARREVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            L  L ER G     KG++T +  + +  D+   PI D    I +G I+L+R L + G  
Sbjct: 280 NLSTLYERAGRIRGLKGSVTQLPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKNGIQ 339

Query: 349 PPVDPLASVSRLADKA 364
           PP+D L S+SRL DK 
Sbjct: 340 PPIDVLPSLSRLKDKG 355


>gi|212896660|gb|ACJ38533.1| membrane-bound ATP synthase subunit B [Clitoria ternatea]
          Length = 468

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG    D +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTDTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEENIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|219552242|gb|ACL26836.1| ATP synthase beta chain [Phyllanthus debilis]
          Length = 423

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSAIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|46391135|gb|AAS90662.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
 gi|53981744|gb|AAV25021.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
          Length = 398

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 20/312 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           S    GR+ N LG+P+D   +LG  D S    I    P  +        F+ GI+V+D+ 
Sbjct: 25  SGATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFENGIKVVDLL 81

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+     
Sbjct: 82  APYRRGGKIGLFGGAGVGKTGLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 141

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 NL++S V  V    +E P  R    LTA+T+AEYF      +VLL +++I RF 
Sbjct: 142 GVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFINNIFRFV 201

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 202 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 259

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 260 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQR 319

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 320 YKELQDIIAILG 331


>gi|6689564|emb|CAB65488.1| ATP synthase beta subunit [Vahlia capensis]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G     P      GR
Sbjct: 50  KGRDTVGQTINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|52788846|gb|AAU87393.1| ATP synthase beta chain [Lophosoria quadripinnata]
 gi|99640603|emb|CAJ45109.1| putative beta subunit of chloroplast ATP synthase [Lophosoria
           quadripinnata]
          Length = 383

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S+   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|18077573|emb|CAC88856.1| atpD beta synthase chain [Pseudomonas tolaasii]
          Length = 258

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHCGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|123325629|gb|ABM74439.1| ATP synthase beta subunit [Citrus limon]
 gi|123325651|gb|ABM74450.1| ATP synthase beta subunit [Citrus sinensis]
          Length = 463

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|195183501|dbj|BAG66964.1| ATP synthase beta subunit [Hybanthus calceolaria]
          Length = 489

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119368024|dbj|BAF40515.1| ATP synthase beta subunit [Scagea oligostemon]
          Length = 489

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +      + F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLEIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL--- 210
           P   G +IG+F G+G+GK+ L+     +   +     +   VGER RE  +  ++     
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHGGVSVFGGVGERTREGNDLYKEMKESG 212

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +        E  +   S+   + R+
Sbjct: 331 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQSNIVGKEHYETAQSVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718140|gb|AAK72809.1| ATP synthase beta subunit [Moringa oleifera]
          Length = 479

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|319945902|ref|ZP_08020152.1| V-type ATP synthase, subunit B [Streptococcus australis ATCC
           700641]
 gi|319747967|gb|EFW00211.1| V-type ATP synthase, subunit B [Streptococcus australis ATCC
           700641]
          Length = 465

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 13/334 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98
            Y  L +  +H G      GQV+ +  D  +V +     G  +    + F      +  S
Sbjct: 27  HYNELVEIKLHDGTTRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVS 84

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N +GKPIDG   +   +  ++I  +    ++R   ++  +TGI  ID    L
Sbjct: 85  EDMVGRIFNGMGKPIDGGPEIIP-EKYLDIDGQAINPVSRDYPDEFIQTGISAIDHLNTL 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ VF+GSG+    L +  AR      S+    V+ + +G    E   F+ D    
Sbjct: 144 VRGQKLPVFSGSGLPHKELAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRET 203

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
             + +SV+ +  +++  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++
Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  +++ L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGY 323

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I+L+R L   G  PP++ L S+SRL DK 
Sbjct: 324 ITEGQIILSRDLYNSGYRPPINVLPSLSRLKDKG 357


>gi|306996343|gb|ADN21391.1| ATP synthase beta subunit [Rhizobium gallicum]
          Length = 378

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 159/307 (51%), Gaps = 19/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N +G+P+D    L     S   + +  P+   Q  E     TGI+V+D+  P   
Sbjct: 50  LGRIMNVIGEPVDEAGPLVTA--SKRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYAK 107

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---- 208
           G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     
Sbjct: 108 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNK 166

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           + G    K+ +V    +E P  R    LT +T+AE F  +G +VL  +D+I RF  +  E
Sbjct: 167 HGGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSE 226

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   + 
Sbjct: 227 VSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATS 284

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +
Sbjct: 285 FAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQ 344

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 345 DIIAILG 351


>gi|61968205|gb|AAX57029.1| ATP synthase beta subunit [Andrachne ovalis]
          Length = 479

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYEIAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|21633343|gb|AAM52146.1| ATP synthase beta subunit [Iseia luxurians]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708628|emb|CAB89991.1| ATP synthase beta subunit [Saintpaulia ionantha]
          Length = 483

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|21633269|gb|AAM52109.1| ATP synthase beta subunit [Astripomoea grantii]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633337|gb|AAM52143.1| ATP synthase beta subunit [Aniseia martinicensis]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S  G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSXFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|242620112|ref|YP_003002116.1| ATP synthase CF1 beta chain [Aureococcus anophagefferens]
 gi|239997357|gb|ACS36880.1| ATP synthase CF1 beta chain [Aureococcus anophagefferens]
          Length = 475

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           A   GR+ N LG+P+D    +G  D S  + I    P     +     F+TGI+V+D+  
Sbjct: 88  APTLGRIFNILGQPVD---EMGPVDSSETLPIHRDAPAFTELETKPSVFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +NL +S V +     +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 205 VINENNLPESKVALCYGQMNEPPGARMRIGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R+LA +G YP VDPL S S +       D       ++  ++ ++
Sbjct: 323 PATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPEIVGDTHYDTAQNVKKILQKY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|229002316|dbj|BAH57921.1| ATP synthase beta subunit [Potamogeton oxyphyllus]
 gi|229002318|dbj|BAH57922.1| ATP synthase beta subunit [Potamogeton pusillus]
 gi|229002320|dbj|BAH57923.1| ATP synthase beta subunit [Potamogeton pusillus]
 gi|229002326|dbj|BAH57926.1| ATP synthase beta subunit [Potamogeton cristatus]
          Length = 491

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|218884309|ref|YP_002428691.1| V-type ATP synthase subunit B [Desulfurococcus kamchatkensis 1221n]
 gi|218765925|gb|ACL11324.1| V-type ATPase subunit B [Desulfurococcus kamchatkensis 1221n]
          Length = 467

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 179/364 (49%), Gaps = 37/364 (10%)

Query: 16  SKNLVVQGG--YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYI 72
           SK L  QGG  +  +I  V Y           G+ V      S+  LGQVI ++  +  I
Sbjct: 11  SKLLKAQGGLLFAETIPGVTY-----------GEIVEVTLPTSEVKLGQVIDVSKGVTVI 59

Query: 73  CPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDL 124
              G   ++ L    + +     +I  S    GR+ + LG+PIDG      +D L     
Sbjct: 60  QVFGGVADVDLSRSRVKYRGETLKIPVSIDMLGRIFDGLGRPIDGGPRIIPEDYLDINGA 119

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR- 183
            +   S++PP+       +  +TGI  ID    +  GQ++ +F+GSG+  + + +   R 
Sbjct: 120 PLNPASRLPPS-------EFIETGISAIDGLFSIVRGQKLPIFSGSGLPHNRIAAQIVRQ 172

Query: 184 SDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA-PLT 237
           +    K     ++ + +G    +   FI+++      +  V +  +  SP++ ++A P  
Sbjct: 173 ARVLGKEEKFAIVFAAIGVPYDDAMFFIDNFKKTGALERTVALINTASSPVIERIATPRV 232

Query: 238 AVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+TIAE+ +   D +VL+IL  +T +  ++RE++    E+P  RGYP  ++++L  + ER
Sbjct: 233 ALTIAEHLAWTHDMHVLVILTDMTFYCEALRELSAAREEVPGRRGYPGYMYTDLATIYER 292

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G    +KG+IT +  + +  D+   PI D    I +G +VL+R L  +G YPP DPL S
Sbjct: 293 AGRVHSKKGSITQLPILTMPDDDITHPIPDLTGYITEGQLVLSRQLWLKGIYPPFDPLMS 352

Query: 357 VSRL 360
           +SRL
Sbjct: 353 LSRL 356


>gi|7708260|emb|CAB90054.1| ATP synthase beta subunit [Cobaea scandens]
          Length = 484

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDNRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|75330506|sp|Q8MBQ1|ATPB_IPOAQ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633257|gb|AAM52103.1| ATP synthase beta subunit [Ipomoea aquatica]
          Length = 490

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|28188341|gb|AAL92550.1| ATP synthase beta subunit [Coleochaete sp. 528a3]
          Length = 385

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 31  ATLGRIFNVLGEPVD---ELGPVDSTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 87

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 88  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 147

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 148 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 207

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 208 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 265

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W    +  +    +   + R+
Sbjct: 266 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKQTLQRY 324

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 325 KELQDIIAILG 335


>gi|15425580|emb|CAC60328.1| ATP synthase beta subunit [Forstera bellidifolia]
          Length = 495

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|75336618|sp|Q9MU26|ATPB_NYMOD RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688029|emb|CAB89719.1| ATP synthase beta subunit [Nymphaea odorata]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|4995848|emb|CAB44291.1| H(+)-transporting ATP synthase [Thomasia solanacea]
          Length = 483

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 92  GSTLGRIFNVLGEPID---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|4063564|gb|AAC98340.1| ATP synthase beta subunit [Schinus molle]
          Length = 456

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVGQTINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 201 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 319 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|52788827|gb|AAU87386.1| ATP synthase beta chain [Azolla filiculoides]
          Length = 383

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R  A +G YP VDPL S S +  + W   A+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|11583|emb|CAA25114.1| ATPase, beta subunit [Hordeum vulgare]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDDIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|18077565|emb|CAC88852.1| atpD beta synthase chain [Pseudomonas mendocina]
          Length = 258

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|305671639|gb|ADM63129.1| ATP synthase beta subunit [Citronella suaveolens]
          Length = 489

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|219552260|gb|ACL26845.1| ATP synthase beta chain [Phyllanthus ussuriensis]
          Length = 423

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G     P      GR
Sbjct: 30  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAALSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  +   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---ELGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|8439268|emb|CAB90043.3| ATP synthase beta subunit [Chrysosplenium iowense]
          Length = 497

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSACWCGR 104
           K  D LGQ I +  ++  +        +++          D++       +       GR
Sbjct: 49  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTGAALSVPVGGVTLGR 108

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 109 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 165

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 166 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 225

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 226 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 285

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 286 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 343

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 344 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 403

Query: 390 RLIGG 394
             I G
Sbjct: 404 IAILG 408


>gi|5001583|gb|AAD37038.1|AF092112_1 ATP synthase beta subunit [Cercidiphyllum japonicum]
          Length = 480

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIXRSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|306996339|gb|ADN21389.1| ATP synthase beta subunit [Rhizobium endophyticum CCGE 2052]
          Length = 378

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 159/307 (51%), Gaps = 19/307 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR++N +G+P+D    L     S   + +  P+   Q  E     TGI+V+D+  P   
Sbjct: 50  LGRIMNVIGEPVDEAGPLVTA--SKRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYAR 107

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---- 208
           G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     
Sbjct: 108 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNK 166

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           + G    K+ +V    +E P  R    LT +T+AE F  +G +VL  +D+I RF  +  E
Sbjct: 167 HGGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSE 226

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +++ ++ ERI  +    G+IT+V ++ V  D+  DP   + 
Sbjct: 227 VSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATS 284

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+RS+AE+G YP VDPL S SR+ D     +E  ++   +   + R++  +
Sbjct: 285 FAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQ 344

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 345 DIIAILG 351


>gi|305671657|gb|ADM63138.1| ATP synthase beta subunit [Mackinlaya confusa]
          Length = 489

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTSTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|265763727|ref|ZP_06092295.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_16]
 gi|263256335|gb|EEZ27681.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_16]
          Length = 505

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + D +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  K+S+                     +V    +E P  R    L+ +T+AE F   G
Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMG 269

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387

Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389
               E   V+  +  ++ R +E +DI
Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413


>gi|6687481|emb|CAB64951.1| ATP synthase beta subunit [Euthystachys abbreviata]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708546|emb|CAB89971.1| ATP synthase beta subunit [Platytheca verticillata]
          Length = 474

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 200 VINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|2655153|gb|AAB87886.1| ATP synthase beta subunit [Drosophila pseudoobscura]
          Length = 323

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 16/260 (6%)

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE-- 201
           GI+++D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE  
Sbjct: 1   GIKLVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGN 59

Query: 202 --VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLI 255
               E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL 
Sbjct: 60  DLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLF 119

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V
Sbjct: 120 IDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYV 177

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374
             D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+ 
Sbjct: 178 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVAR 237

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +  ++  ++  +DI  I G
Sbjct: 238 GVQKILQDYKSLQDIIAILG 257


>gi|123325653|gb|ABM74451.1| ATP synthase beta subunit [Citrus tachibana]
 gi|123325689|gb|ABM74469.1| ATP synthase beta subunit [Microcitrus garrowayae]
          Length = 462

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|124360831|gb|ABN08803.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region; H+-transporting two-sector ATPase, delta/epsilon
           subunit [Medicago truncatula]
          Length = 614

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 178/370 (48%), Gaps = 27/370 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISP 97
           + ++ QG+  D +GQ I +  ++        V    +   + +  G +V + G    +  
Sbjct: 45  NALIVQGR--DTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMVVINTGAPLSVPV 102

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
                GR+ N LG+PID    +  G  S  I    P  +        F+TGI+V+D+  P
Sbjct: 103 GGATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|4995759|emb|CAB44244.1| H(+)-transporting ATP synthase [Neurada procumbens]
          Length = 484

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|4063538|gb|AAC98327.1| ATP synthase beta subunit [Carica papaya]
          Length = 456

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKFSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|91208995|ref|YP_538855.1| ATP synthase CF1 beta subunit [Solanum bulbocastanum]
 gi|118573749|sp|Q2MII0|ATPB_SOLBU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|84371902|gb|ABC56220.1| ATP synthase CF1 beta subunit [Solanum bulbocastanum]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085175|gb|AAX62992.1| ATP synthase beta subunit [Pera bicolor]
          Length = 482

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKAAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|329962161|ref|ZP_08300170.1| ATP synthase F1, beta subunit [Bacteroides fluxus YIT 12057]
 gi|328530566|gb|EGF57433.1| ATP synthase F1, beta subunit [Bacteroides fluxus YIT 12057]
          Length = 506

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 160/327 (48%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L +   +  I  + P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDRQG-AYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     ++    +E P  R+   L+ +T+AE F   G
Sbjct: 210 GEEFKKSMEAGNWDLSKVDYDEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   
Sbjct: 270 AETDGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  ++   +  ++ R +E +DI
Sbjct: 388 HIVGQEHYEVAQRVKQILQRNKELQDI 414


>gi|89242540|gb|ABD64628.1| ATPase beta subunit [Lamium sp. Qiu 95019]
          Length = 436

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|113910904|gb|ABI48184.1| ATPase beta subunit [Heterophyllium affine]
          Length = 472

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|4995798|emb|CAB44271.1| H(+)-transporting ATP synthase [Schoutenia glomerata]
          Length = 482

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|21633283|gb|AAM52116.1| ATP synthase beta subunit [Stictocardia incomta]
          Length = 490

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|113910886|gb|ABI48175.1| ATPase beta subunit [Leucodon julaceus]
 gi|113910908|gb|ABI48186.1| ATPase beta subunit [Climacium americanum]
 gi|113910912|gb|ABI48188.1| ATPase beta subunit [Myurium hochstetteri]
          Length = 472

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|75330507|sp|Q8MBQ2|ATPB_IPOWR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633255|gb|AAM52102.1| ATP synthase beta subunit [Ipomoea wrightii]
          Length = 490

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633443|gb|AAM52196.1| ATP synthase beta subunit [Tridynamia megalantha]
          Length = 490

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  K + +  I    P  +        F+TGI V+D+  
Sbjct: 102 GSTLGRIFNVLGKPVD---NLGPVKTNXTSPIQRSAPAFIQLDTKLSIFETGIXVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGEXTREGNDLYM--EMKE 216

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 217 SGVINEETIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 276

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 334

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 335 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 394

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 395 RYKELQDIIAILG 407


>gi|7708552|emb|CAB89959.1| ATP synthase beta subunit [Plumeria obtusa]
          Length = 484

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|14717920|gb|AAK72703.1| ATP synthase beta subunit [Abatia parviflora]
          Length = 471

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|75330508|sp|Q8MBQ3|ATPB_IPOQU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633253|gb|AAM52101.1| ATP synthase beta subunit [Ipomoea quamoclit]
          Length = 490

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|30468214|ref|NP_849101.1| ATP synthase CF1 beta subunit [Cyanidioschyzon merolae strain 10D]
 gi|75328373|sp|Q85FT2|ATPB_CYAME RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30409314|dbj|BAC76263.1| ATP synthase CF1 beta chain [Cyanidioschyzon merolae strain 10D]
          Length = 467

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG  +D   ++ +  +   I  + P  +  +     F+TGI+V+D+  P   G 
Sbjct: 85  GRIFNVLGDCVDNLGTVTRQAVQ-PIHKQAPSFVQLETKPSVFETGIKVVDLLAPYRRGG 143

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213
           +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  E+          N
Sbjct: 144 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYEEMKASGVIQSQN 203

Query: 214 LKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V +     +E P  R    LTA+T+AE+F      +VLL +D+I RF  +  E++
Sbjct: 204 LSESKVALCYGQMNEPPGARMRVGLTALTMAEHFRDINKQDVLLFIDNIFRFVQAGSEVS 263

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D+  DP   +  +
Sbjct: 264 ALLGRMPSAVGYQPTLATEMGALQERI--TSTVDGSITSIQAVYVPADDLTDPAPATTFA 321

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +   +  S +   + R++E +DI
Sbjct: 322 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGEAHYQTASRVKQTLQRYKELQDI 381

Query: 390 RLIGG 394
             I G
Sbjct: 382 IAILG 386


>gi|290490158|gb|ADD31486.1| ATP synthase CF1 beta subunit protein [Nerium oleander]
          Length = 495

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|123325627|gb|ABM74438.1| ATP synthase beta subunit [Citrus latipes]
          Length = 457

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|61968293|gb|AAX57073.1| ATP synthase beta subunit [Phyllanthus nummulariifolius]
 gi|61968295|gb|AAX57074.1| ATP synthase beta subunit [Phyllanthus nummulariifolius]
          Length = 479

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|56675703|emb|CAB65474.2| ATP synthase beta subunit [Titanotrichum oldhamii]
          Length = 496

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004113|gb|AAG43896.1|AF213765_1 ATP synthase beta subunit [Grammadenia sp. Stahl 1579]
          Length = 477

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|75326812|sp|Q7H8M1|ATPB_IPOSE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633259|gb|AAM52104.1| ATP synthase beta subunit [Ipomoea setosa]
 gi|21633261|gb|AAM52105.1| ATP synthase beta subunit [Ipomoea arborescens]
          Length = 490

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21684895|emb|CAD11574.1| ATP synthase beta subunit [Trithuria submersa]
          Length = 492

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 157/306 (51%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +  ++ +  PA  +   +   F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPMD---NLGPVDTRTTSVIHRSAPAFTQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                ++ KS V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 215 VINEQDIAKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDI 389
           +E +DI
Sbjct: 393 KELQDI 398


>gi|75332461|sp|Q95AD7|ATPB_PHOTN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943755|emb|CAD10768.1| atp synthase, beta subunit [Phormium tenax]
          Length = 498

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G++IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGRKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|21633347|gb|AAM52148.1| ATP synthase beta subunit [Tetralocularia pennellii]
          Length = 485

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 97  GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESR 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|4063522|gb|AAC98319.1| ATP synthase beta subunit [Acer saccharum]
          Length = 456

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|18077557|emb|CAC88848.1| atpD beta synthase chain [Pseudomonas fluorescens]
          Length = 258

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|313576709|gb|ADR66862.1| ATP synthase beta subunit [Ternstroemia fragrans]
          Length = 479

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|297588750|ref|ZP_06947393.1| V-type ATP synthase, subunit B [Finegoldia magna ATCC 53516]
 gi|297574123|gb|EFH92844.1| V-type ATP synthase, subunit B [Finegoldia magna ATCC 53516]
          Length = 462

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 13/316 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D+  +        I+L +    + GR   +  S    GRV + LG+PID   
Sbjct: 42  GRVVEIDHDVAMVQVFEGTSGINLQETTVRFLGRPLELGVSEDMIGRVFDGLGRPIDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I       ++R    +  +TG+  ID    L  GQ++ +F+GSG+  + L
Sbjct: 102 KIIPED-KVDINGSSINPVSRDYPSEFIETGVSTIDGLNTLVRGQKLPIFSGSGLPHNKL 160

Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
            +  AR        D F  V+ + +G    E + FI D+     + ++V+ +  +D+  I
Sbjct: 161 AAQIARQAKVLGKDDKF-AVVFAAMGITFEEAQYFIGDFNKTGAIDRAVLFMNLADDPAI 219

Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AE+ +  KG +VL+I+  +T +A ++RE++    E+P  RGYP  +++
Sbjct: 220 ERLSTPKMALTCAEFLAFEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  L ER G     +G+IT +  + +  D+   PI D    I +G I+L+R L ++G  
Sbjct: 280 DLATLYERAGRIVGREGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKKGYE 339

Query: 349 PPVDPLASVSRLADKA 364
           PP++ + S+SRL DK 
Sbjct: 340 PPINAIPSLSRLKDKG 355


>gi|219552238|gb|ACL26834.1| ATP synthase beta chain [Phyllanthus gneissicus]
          Length = 423

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|155029317|dbj|BAF75542.1| ATP synthase beta subunit [Seidelia triandra]
          Length = 489

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN+GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDNVGQEINVTCEVQQLLGNNRVRTVAMSATDGLKRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D      I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTRARSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|110456680|gb|ABG74789.1| ATPase beta subunit [Jasminum abyssinicum]
          Length = 498

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  K+   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|46360675|gb|AAS89119.1| ATP synthase beta subunit [Hattorianthus erimonus]
          Length = 382

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D   +LG  D  M   + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 4   RIFNVLGEPVD---NLGPVDTGMTFPIHRAAPAFIQLDTKLSIFETGIKVVDLLAPYRRG 60

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 61  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQ 120

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 121 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 180

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 181 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 238

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 297

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 298 DIIAILG 304


>gi|332105877|gb|AEE01401.1| ATP synthase beta chain [Gossypium arboreum]
          Length = 493

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|56675712|emb|CAB64365.2| ATP synthase [Citrus x paradisi]
          Length = 477

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|52082864|gb|AAU26013.1| ATPase beta subunit [Piper umbellatum]
          Length = 477

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMQVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|6689307|emb|CAB65433.1| ATP synthase beta subunit [Sesamum indicum]
          Length = 498

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718222|gb|AAK72849.1| ATP synthase beta subunit [Shepherdia canadensis]
          Length = 476

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 39  KGRDTLGQEINLTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 99  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 215

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 216 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 275

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 276 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 333

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 334 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 393

Query: 390 RLIGG 394
             I G
Sbjct: 394 IAILG 398


>gi|6017824|gb|AAF01646.1| ATP synthase beta subunit [Rheum rhaponticum]
          Length = 498

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R+LA +G YP VDPL S S  L  +       K+   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEAHYKIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|305671633|gb|ADM63126.1| ATP synthase beta subunit [Coriandrum sativum]
          Length = 489

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|123325631|gb|ABM74440.1| ATP synthase beta subunit [Citrus limonia]
          Length = 429

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 48  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 104

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 105 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 164

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 165 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 224

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 225 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 282

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 283 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 342

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 343 KELQDIIAILG 353


>gi|119368014|dbj|BAF40502.1| ATP synthase beta subunit [Passiflora quadrangularis]
          Length = 487

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+++AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNITESKVALVYGQMNEPPGARMRVGLTALSMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +   ++  K   S+   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGSEHYKTAQSVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|1934688|gb|AAB51731.1| ATP synthase beta chain [Tmesipteris tannensis]
          Length = 443

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 153/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D    I    P           F+TGI+V+D+  P
Sbjct: 72  ATLGRIFNVLGEPVD---NLGPINADKKSPIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 128

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 129 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 187

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  
Sbjct: 188 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 247

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 248 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPA 305

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 306 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQR 364

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 365 YKELQDIIAILG 376


>gi|323715492|gb|ADY04814.1| ATP synthase beta subunit [Platycrater arguta]
          Length = 483

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 93  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 151

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 389

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 390 LQDIIAILG 398


>gi|323715474|gb|ADY04805.1| ATP synthase beta subunit [Hydrangea peruviana]
          Length = 485

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 94  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 152

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 153 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 212

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 213 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 272

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 273 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 330

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 331 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|170178346|gb|ACB10592.1| ATP synthase beta subunit [Cornus florida]
          Length = 445

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 71  IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 365

Query: 390 RLIGG 394
             I G
Sbjct: 366 IAILG 370


>gi|219552188|gb|ACL26809.1| ATP synthase beta chain [Glochidion obovatum]
 gi|219552192|gb|ACL26811.1| ATP synthase beta chain [Phyllanthus roseus]
 gi|219552194|gb|ACL26812.1| ATP synthase beta chain [Breynia disticha]
 gi|219552196|gb|ACL26813.1| ATP synthase beta chain [Breynia oblongifolia]
 gi|219552198|gb|ACL26814.1| ATP synthase beta chain [Breynia vitis-idaea]
 gi|219552200|gb|ACL26815.1| ATP synthase beta chain [Breynia retusa]
 gi|219552202|gb|ACL26816.1| ATP synthase beta chain [Breynia fruticosa]
 gi|219552204|gb|ACL26817.1| ATP synthase beta chain [Sauropus granulosus]
 gi|219552206|gb|ACL26818.1| ATP synthase beta chain [Sauropus androgynus]
 gi|219552208|gb|ACL26819.1| ATP synthase beta chain [Sauropus brevipes]
 gi|219552210|gb|ACL26820.1| ATP synthase beta chain [Sauropus quadrangularis]
 gi|219552214|gb|ACL26822.1| ATP synthase beta chain [Phyllanthus emblica]
 gi|219552216|gb|ACL26823.1| ATP synthase beta chain [Phyllanthus lepidocarpus]
 gi|219552218|gb|ACL26824.1| ATP synthase beta chain [Phyllanthus humbertii]
 gi|219552220|gb|ACL26825.1| ATP synthase beta chain [Phyllanthus marojejiensis]
          Length = 423

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|157325537|ref|YP_001468315.1| ATP synthase CF1 beta subunit [Ipomoea purpurea]
 gi|190358672|sp|A7Y3E6|ATPB_IPOPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|157056765|gb|ABV02355.1| ATP synthase CF1 beta subunit [Ipomoea purpurea]
          Length = 499

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|6687379|emb|CAB64927.1| ATP synthase beta subunit [Decumaria barbara]
          Length = 498

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|6686963|emb|CAB64786.1| ATP synthase beta subunit [Barleria prionitis]
          Length = 498

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21633285|gb|AAM52117.1| ATP synthase beta subunit [Turbina oblongata]
          Length = 490

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|4206602|gb|AAD11732.1| ATP synthase beta subunit [Eremocitrus glauca]
          Length = 470

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|123325617|gb|ABM74433.1| ATP synthase beta subunit [Citrus ichangensis]
          Length = 466

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|19033075|gb|AAL83522.1|AF408794_1 ATP synthase beta subunit [Onychonema sp. UTEX LB 832]
          Length = 402

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 160/312 (51%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG     +   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVNATTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +           
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 155

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            ED + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 156 NEDNISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 213

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 214 AGSEVSALLGRMPSAVGYQPTLGTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPA 271

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   A+  +    +   + R
Sbjct: 272 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKKTLQR 330

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 331 YKELQDIIAILG 342


>gi|323715460|gb|ADY04798.1| ATP synthase beta subunit [Cardiandra alternifolia]
          Length = 481

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 88  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 146

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 147 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 206

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 207 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 266

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 267 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 324

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 325 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 384

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 385 LQDIIAILG 393


>gi|306773432|emb|CBJ55292.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           havilandii]
          Length = 383

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|305671691|gb|ADM63155.1| ATP synthase beta subunit [Angelica sylvestris]
          Length = 489

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|219552226|gb|ACL26828.1| ATP synthase beta chain [Phyllanthus mangenotii]
          Length = 420

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 82  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 138

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 139 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 198

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 199 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 258

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 259 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 316

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 317 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 376

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 377 ELQDIIAILG 386


>gi|154151883|ref|YP_001405501.1| V-type ATP synthase subunit B [Candidatus Methanoregula boonei 6A8]
 gi|167016628|sp|A7IAU7|VATB_METB6 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|154000435|gb|ABS56858.1| ATP synthase, B subunit [Methanoregula boonei 6A8]
          Length = 462

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 174/348 (50%), Gaps = 24/348 (6%)

Query: 60  GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
           GQV+  + D+V +       GIG +     + F     ++       GR+++  GKPIDG
Sbjct: 41  GQVLDTSDDLVVVQIFETTTGIGRD---SGVRFTGETIKMPVGREMLGRILSGGGKPIDG 97

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +  ++I         R       +TGI  ID    L  GQ++ +F+G+G+  +
Sbjct: 98  GPEIVP-EKRLDITGAAINPWARNSPSDFIQTGISTIDGTNTLVRGQKLPIFSGAGLPHN 156

Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
            +    AR       ++ F  V+ + +G    E   F++D+     L+ +VV +  +D+ 
Sbjct: 157 NVALQIARQAKVPGSTESF-AVVFAAMGITKEEANYFMQDFERTGALEHAVVFLNLADDP 215

Query: 228 PILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            + R + P  A+T AEY + + G +VL+IL  +T +  ++R+I     E+P  RGYP  +
Sbjct: 216 AVERIITPRLALTTAEYLAFELGMHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYM 275

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  + ER G  + +KG++T +  + + GD+   PI D    I +G IV+NR L  +G
Sbjct: 276 YTDLACIYERAGIIKGQKGSVTQIPILTMPGDDITHPIPDLTGYITEGQIVVNRELHRKG 335

Query: 347 RYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
            YPP++ L S+SRL +    K  + ++ K VS    +   + E  D+R
Sbjct: 336 IYPPINVLPSLSRLMNLGIGKGHTREDHKKVSD--QMYAGYAEGNDLR 381


>gi|113910902|gb|ABI48183.1| ATPase beta subunit [Hypnum imponens]
          Length = 465

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|56675897|emb|CAB90024.2| ATP synthase beta subunit [Bouvardia ternifolia]
          Length = 490

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 180/372 (48%), Gaps = 31/372 (8%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISP 97
           D +V +GK  D +GQ I +  ++        V    +   + ++ G  V   G    +  
Sbjct: 36  DALVVKGK--DTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIGTGAPLSVPV 93

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+ 
Sbjct: 94  GGATLGRIFNVLGEPVD---NLGPVDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLL 150

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+     
Sbjct: 151 APYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 210

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 211 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 270

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 271 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 328

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 329 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQR 388

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 389 YKELQDIIAILG 400


>gi|24940266|emb|CAD43399.1| ATP synthase beta subunit [Tiquilia plicata]
          Length = 480

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTLTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|21633445|gb|AAM52197.1| ATP synthase beta subunit [Porana commixta]
          Length = 486

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 98  GSTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 214 GVINEETIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 271

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 272 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 329

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 330 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 389

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 390 QRYKELQDIIAILG 403


>gi|7708524|emb|CAB89949.1| ATP synthase beta subunit [Ochna multiflora]
          Length = 484

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G LP A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|4063554|gb|AAC98335.1| ATP synthase beta subunit [Nicotiana tabacum]
          Length = 456

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIEVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|4063568|gb|AAC98342.1| ATP synthase beta subunit [Pavonia multiflora]
          Length = 456

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|57868920|gb|AAW57456.1| ATP synthase beta subunit [Hydrangea sp. JS-2005]
          Length = 492

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 100 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 158

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 159 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 218

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 219 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 278

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 279 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 336

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 337 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 396

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 397 LQDIIAILG 405


>gi|53713460|ref|YP_099452.1| F0F1 ATP synthase subunit beta [Bacteroides fragilis YCH46]
 gi|60681706|ref|YP_211850.1| F0F1 ATP synthase subunit beta [Bacteroides fragilis NCTC 9343]
 gi|253565448|ref|ZP_04842903.1| ATP synthase subunit beta [Bacteroides sp. 3_2_5]
 gi|55977771|sp|P13356|ATPB_BACFR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81315229|sp|Q5LD89|ATPB_BACFN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|52216325|dbj|BAD48918.1| ATP synthase beta chain [Bacteroides fragilis YCH46]
 gi|60493140|emb|CAH07921.1| ATP synthase beta chain [Bacteroides fragilis NCTC 9343]
 gi|251945727|gb|EES86134.1| ATP synthase subunit beta [Bacteroides sp. 3_2_5]
          Length = 505

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + D +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  K+S+                     +V    +E P  R    L+ +T+AE F   G
Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMG 269

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387

Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389
               E   V+  +  ++ R +E +DI
Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413


>gi|332105885|gb|AEE01405.1| ATP synthase beta chain [Thespesia populnea]
          Length = 493

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|218130967|ref|ZP_03459771.1| hypothetical protein BACEGG_02569 [Bacteroides eggerthii DSM 20697]
 gi|317476278|ref|ZP_07935528.1| ATP synthase F1 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986839|gb|EEC53171.1| hypothetical protein BACEGG_02569 [Bacteroides eggerthii DSM 20697]
 gi|316907552|gb|EFV29256.1| ATP synthase F1 [Bacteroides eggerthii 1_2_48FAA]
          Length = 506

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L +   +  I  + P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDRTG-AYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KK +                     ++    +E P  R+   L+ +T+AE F   G
Sbjct: 210 GEEFKKGMEEGHWDLSKVDYNEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   
Sbjct: 270 SESNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  ++   +  ++ R +E +DI
Sbjct: 388 HIVGQEHYEVAQRVKQILQRNKELQDI 414


>gi|123325667|gb|ABM74458.1| ATP synthase beta subunit [Fortunella margarita]
          Length = 466

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|332105879|gb|AEE01402.1| ATP synthase beta chain [Luehea divaricata]
          Length = 493

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|305671625|gb|ADM63122.1| ATP synthase beta subunit [Hydrocotyle vulgaris]
          Length = 464

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 74  GTTLGRIFNVLGEPVD---NLGSVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 130

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 131 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 190

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 191 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 250

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 251 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 308

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 309 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 368

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 369 KELQDIIAILG 379


>gi|257852982|gb|ACV71502.1| ATP synthase beta subunit [Brunellia acutangula]
          Length = 489

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|257790799|ref|YP_003181405.1| ATP synthase F1, beta subunit [Eggerthella lenta DSM 2243]
 gi|317488489|ref|ZP_07947040.1| ATP synthase F1 [Eggerthella sp. 1_3_56FAA]
 gi|325831926|ref|ZP_08165023.1| ATP synthase F1, beta subunit [Eggerthella sp. HGA1]
 gi|257474696|gb|ACV55016.1| ATP synthase F1, beta subunit [Eggerthella lenta DSM 2243]
 gi|316912421|gb|EFV33979.1| ATP synthase F1 [Eggerthella sp. 1_3_56FAA]
 gi|325486247|gb|EGC88699.1| ATP synthase F1, beta subunit [Eggerthella sp. HGA1]
          Length = 483

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+P+D +  + +    M I    P         + F+TGI+ ID+  P   G 
Sbjct: 105 GRIWNVMGEPVD-EKPMPEVKGYMPIHRPAPDYDELSTTTEIFETGIKAIDLVEPFVKGG 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ ++     +   +     + + VGER RE  + ++E      + K+ 
Sbjct: 164 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSDSGVINKTC 223

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    L  +T AEYF  +G +VLL +D+I RF  +  E++   G +P 
Sbjct: 224 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFVDNIFRFTQAGSEVSALLGRMPS 283

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   VL
Sbjct: 284 AVGYQPTLATEMGDLQERI--TSTSTGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 341

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           +RS++E G YP VDPL S SR  D     +E   V+  +  L+  +++ +DI  I G
Sbjct: 342 SRSISELGIYPAVDPLESTSRALDPQIVGEEHYRVAVGIQELLQNYKDLQDIIAILG 398


>gi|123325633|gb|ABM74441.1| ATP synthase beta subunit [Citrus macroptera]
          Length = 466

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|33327745|gb|AAQ09236.1| ATP synthase beta subunit [Cornus mas]
          Length = 489

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 42  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|12004159|gb|AAG43919.1|AF213788_1 ATP synthase beta subunit [Primula veitchiana]
          Length = 441

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|19033079|gb|AAL83524.1|AF408796_1 ATP synthase beta subunit [Gonatozygon monotaenium]
          Length = 402

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  +++    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVNITTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   A+  +    +   + R++E
Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKKTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|7706839|emb|CAB90028.1| ATP synthase beta subunit [Averrhoa carambola]
          Length = 491

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFMDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|6634488|emb|CAB64375.1| ATP synthase [Citrus trifoliata]
          Length = 482

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|46447304|ref|YP_008669.1| F0F1 ATP synthase subunit alpha [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|81626571|sp|Q6MAK5|ATPA_PARUW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|46400945|emb|CAF24394.1| probable H+-transporting ATP synthase (alpha chain, atpA)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 508

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 11/336 (3%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            LG V+ + +D V +  +G    I   D+V   G+    P      GRVINALG+PIDG 
Sbjct: 61  TLGIVLNLEIDNVGVIILGSDRNIREQDIVKRTGKIASVPVGEGMLGRVINALGQPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            ++   +    I S  P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T
Sbjct: 121 GAIETKEFRA-IESSAPGVVQRKPVNEPVQTGIKAIDSMIPIGRGQRELIIGDRQTGKTT 179

Query: 177 LL--SMFARSDCFDKVIISLVGERGR---EVREFIEDYLGDNLKKSVVVVATSDESPILR 231
           ++  ++  + +     I   +G++     +V + +E++  D +K +++V AT+ +   L+
Sbjct: 180 VILDTIINQKNTGVCCIYVAIGQKSSTIAQVVKILEEH--DAMKYTIIVAATASDPAALQ 237

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +A  + E+F   G +V+   D +++ A + REIA      P    YP  +F    
Sbjct: 238 YVAPYSATALGEHFMYNGKHVICFYDDLSKHAQAYREIALLLRRPPGREAYPGDIFYLHS 297

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +E   G++TAV  +    ++    I  +V SI DG I L   L   G  P
Sbjct: 298 RLLERSAKLSTELGGGSLTAVPVIETQANDVTTYIPTNVISITDGQIYLESDLFYAGVRP 357

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   S SR+  KA S   KK+ +SL   + ++ E
Sbjct: 358 AINVGISASRVGGKAQSKAMKKVAASLRLDLAQYRE 393


>gi|212896634|gb|ACJ38520.1| membrane-bound ATP synthase subunit B [Cajanus cajan]
          Length = 470

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN+GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 33  KGRDNVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 93  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 209

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 210 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 269

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 327

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 328 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 387

Query: 390 RLIGG 394
             I G
Sbjct: 388 IAILG 392


>gi|55957070|emb|CAB64876.2| ATP synthase beta subunit [Cyrtandra hawaiensis]
          Length = 498

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085188|gb|AAX62998.1| ATP synthase beta subunit [Poliothyrsis sp. Alford 44]
          Length = 484

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|229002374|dbj|BAH57911.1| ATP synthase beta subunit [Potamogeton fryeri]
 gi|229002376|dbj|BAH57912.1| ATP synthase beta subunit [Potamogeton natans]
 gi|229002382|dbj|BAH57917.1| ATP synthase beta subunit [Potamogeton praelongus]
          Length = 491

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R+
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|170178338|gb|ACB10588.1| ATP synthase beta subunit [Cornus chinensis]
          Length = 453

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 71  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 306 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 365

Query: 390 RLIGG 394
             I G
Sbjct: 366 IAILG 370


>gi|123325601|gb|ABM74425.1| ATP synthase beta subunit [Citrus aurantiifolia]
          Length = 466

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|113910894|gb|ABI48179.1| ATPase beta subunit [Hookeria acutifolia]
          Length = 472

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 161/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198

Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 199 VINEEKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|20514385|gb|AAM23011.1| ATP synthase beta subunit [Strasburgeria robusta]
          Length = 487

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 91  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 209

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 210 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 269

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 270 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 327

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 328 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 387

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 388 LQDIIAILG 396


>gi|4995053|emb|CAB43983.1| H(+)-transporting ATP synthase [Adansonia rubrostipa]
          Length = 485

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|4206590|gb|AAD11726.1| ATP synthase beta subunit [Clausena excavata]
          Length = 476

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQGVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|332206766|ref|XP_003252465.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Nomascus
           leucogenys]
          Length = 497

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 150/295 (50%), Gaps = 17/295 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+     L++  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E+
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376

Query: 330 SILDGHIVLNRSLAEEGRYPP-VDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           + LD   VL+R++AE G YP     L  +  +      ++E KL  S    I RF
Sbjct: 377 AHLDATTVLSRAIAELGIYPADYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 431


>gi|301163249|emb|CBW22799.1| ATP synthase beta chain [Bacteroides fragilis 638R]
          Length = 505

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + D +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---- 245
           G+  K+S+                     +V    +E P  R    L+ +T+AE F    
Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDIG 269

Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             S   ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387

Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389
               E   V+  +  ++ R +E +DI
Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413


>gi|229002370|dbj|BAH57909.1| ATP synthase beta subunit [Potamogeton alpinus]
 gi|229002372|dbj|BAH57910.1| ATP synthase beta subunit [Potamogeton distinctus]
 gi|229002380|dbj|BAH57916.1| ATP synthase beta subunit [Potamogeton perfoliatus]
 gi|229002386|dbj|BAH57915.1| ATP synthase beta subunit [Potamogeton malaianus]
          Length = 491

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQRVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|219552246|gb|ACL26838.1| ATP synthase beta chain [Phyllanthus tenellus]
          Length = 423

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|123325579|gb|ABM74414.1| ATP synthase beta subunit [Atalantia monophylla]
 gi|123325587|gb|ABM74418.1| ATP synthase beta subunit [Citrus x paradisi]
 gi|123325591|gb|ABM74420.1| ATP synthase beta subunit [x Citrofortunella sp. PI 539802]
 gi|123325597|gb|ABM74423.1| ATP synthase beta subunit [Citrus maxima]
 gi|123325599|gb|ABM74424.1| ATP synthase beta subunit [Citrus sp. 'amboinensis']
 gi|123325605|gb|ABM74427.1| ATP synthase beta subunit [Citrus aurantium]
 gi|123325607|gb|ABM74428.1| ATP synthase beta subunit [Citrus bergamia]
 gi|123325609|gb|ABM74429.1| ATP synthase beta subunit [Citrus celebica]
 gi|123325615|gb|ABM74432.1| ATP synthase beta subunit [Citrus hystrix]
 gi|123325619|gb|ABM74434.1| ATP synthase beta subunit [Citrus indica]
 gi|123325621|gb|ABM74435.1| ATP synthase beta subunit [Citrus jambhiri]
 gi|123325625|gb|ABM74437.1| ATP synthase beta subunit [Citrus latifolia]
 gi|123325637|gb|ABM74443.1| ATP synthase beta subunit [Citrus maxima]
 gi|123325639|gb|ABM74444.1| ATP synthase beta subunit [Citrus medica]
 gi|123325641|gb|ABM74445.1| ATP synthase beta subunit [Citrus myrtifolia]
 gi|123325643|gb|ABM74446.1| ATP synthase beta subunit [Citrus obovoidea]
 gi|123325645|gb|ABM74447.1| ATP synthase beta subunit [Citrus x paradisi]
 gi|123325647|gb|ABM74448.1| ATP synthase beta subunit [Citrus reticulata]
 gi|123325661|gb|ABM74455.1| ATP synthase beta subunit [Feroniella oblata]
 gi|123325671|gb|ABM74460.1| ATP synthase beta subunit [Citrus hybrid cultivar]
 gi|123325685|gb|ABM74467.1| ATP synthase beta subunit [Microcitrus australasica]
 gi|123325695|gb|ABM74472.1| ATP synthase beta subunit [Microcitrus warburgiana]
          Length = 466

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|123325611|gb|ABM74430.1| ATP synthase beta subunit [Citrus gracilis]
          Length = 466

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|110915700|gb|ABH02638.1| ATP synthase beta subunit [Sphenopus divaricatus]
          Length = 471

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYXPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|130750318|gb|ABO32264.1| ATP synthase subunit B [Aphelia brizula]
          Length = 427

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S+   I    P  ++       F+TGI+V+D+  P
Sbjct: 35  ATLGRIFNVLGEPVD---NLGPVDTSVTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYIEMKESG 150

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E  L ++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 151 VINEKDLAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRF 208

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  +K +IT++ +V V  D+  D
Sbjct: 209 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTD 266

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + 
Sbjct: 267 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYEIAQRVKQTLQ 326

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 327 RYKELQDIIAILG 339


>gi|4995059|emb|CAB43991.1| H(+)-transporting ATP synthase [Byttneria filipes]
          Length = 478

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|21684881|emb|CAD11567.1| ATP synthase beta subunit [Coleochloa abyssinica]
          Length = 480

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID    LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 93  TTLGRIFNVLGEPID---DLGPVDTSTTSPIHRPAPAFVELDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 210 INEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+LA +G YP V PL S S +       DE  ++   +     R++
Sbjct: 328 ATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVGDEHYEIAQRVKQTSQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|21633339|gb|AAM52144.1| ATP synthase beta subunit [Aniseia cernua]
          Length = 487

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 99  GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|143924|gb|AAA22901.1| ATP-synthetase beta-subunit [Bacteroides fragilis]
          Length = 505

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 158/326 (48%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + D +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE      
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 208 ------------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
                             DY      ++ +V    +E P  R    L+ +T+AE F   G
Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMG 269

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387

Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389
               E   V+  +  ++ R +E +DI
Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413


>gi|123325669|gb|ABM74459.1| ATP synthase beta subunit [Fortunella polyandra]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|194267385|gb|ACF35678.1| ATP synthase beta subunit [Grevillea caleyi]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|110915696|gb|ABH02636.1| ATP synthase beta subunit [Sclerochloa dura]
          Length = 472

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  ++K  G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIAFTKK--GSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|118917406|dbj|BAF40511.1| ATP synthase beta subunit [Phyllanthus flexuosus]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910768|gb|ABI48116.1| ATPase beta subunit [Riccia sorocarpa]
          Length = 456

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 69  LGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 186 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 304 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 362

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 363 LQDIIAILG 371


>gi|7688421|emb|CAB89737.1| ATP synthase beta subunit [Viscainoa geniculata]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 104 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 221 INEKNIAESKVALVYGQXNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 280

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 338

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 398

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 399 ELQDIIAILG 408


>gi|4206578|gb|AAD11720.1| ATP synthase beta subunit [Severinia buxifolia]
          Length = 474

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|18077567|emb|CAC88853.1| atpD beta synthase chain [Pseudomonas putida]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|18077547|emb|CAC88843.1| atpD beta synthase chain [Pseudomonas cichorii]
 gi|18077571|emb|CAC88855.1| atpD beta synthase chain [Pseudomonas syringae]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|328924790|gb|ADO64897.2| ATP synthase CF1 beta subunit [Theobroma cacao]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|194267341|gb|ACF35657.1| ATP synthase beta subunit [Orites diversifolia]
          Length = 497

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|167391812|ref|YP_001671690.1| ATP synthase CF1 beta subunit [Carica papaya]
 gi|190358275|sp|B1A942|ATPB_CARPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|166344139|gb|ABY86789.1| ATP synthase CF1 beta chain [Carica papaya]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|149384671|gb|ABR25144.1| ATP synthase beta chain [Nephrolepis hirsutula]
 gi|149798703|gb|ABR32042.1| ATP synthase beta chain [Nephrolepis cordifolia]
          Length = 426

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|119368506|ref|YP_913194.1| ATP synthase beta subunit [Gossypium barbadense]
 gi|125987718|sp|A0ZZ42|ATPB_GOSBA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|119224868|dbj|BAF41254.1| ATP synthase beta subunit [Gossypium barbadense]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
            E +DI  I G
Sbjct: 399 NELQDIIAILG 409


>gi|61968203|gb|AAX57028.1| ATP synthase beta subunit [Andrachne aspera]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|6689056|emb|CAB65372.1| ATP synthase beta subunit [Paulownia tomentosa]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|4063570|gb|AAC98343.1| ATP synthase beta subunit [Tropaeolum tricolor]
          Length = 456

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|15828921|ref|NP_326281.1| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP]
 gi|17372627|sp|Q98QB6|ATPB2_MYCPU RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|14089864|emb|CAC13623.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis]
          Length = 468

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 178/347 (51%), Gaps = 21/347 (6%)

Query: 75  VGIGEE-ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSK 131
           + IGEE I + D+       F +   +   G + + LG  ++       GD   +E+ S 
Sbjct: 53  IKIGEEQIKINDIAIDTKESFNVPVGSATNGAIFDVLGNLLNEH----PGDFKKVEVDST 108

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDC 186
           +    +     +   TGI++ID F P+  G +IG+F G+G+GK+ ++     ++  + D 
Sbjct: 109 ISTEKHFNSDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDS 168

Query: 187 FD-KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEY 244
            D KV     GER RE +E  ++ +  +L KS  +  +    P   +M  L   +T AEY
Sbjct: 169 NDVKVFFVGTGERTREAKELYDELVNSSLIKSTSLFISQMNEPSGSRMKILPVGITAAEY 228

Query: 245 F-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
              S+  +VL  +D+I R+  + RE++ + G+ P   GY  ++ S++  + ER+  S+  
Sbjct: 229 ARDSEQKDVLFFVDNIYRYLQAGRELSFSLGKKPSEAGYQATLVSDISSVQERLANSKH- 287

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LAD 362
            G+IT+  +V +  D+ NDP + ++ + LD  +VL+R +  EG +P +DPL S S  L +
Sbjct: 288 -GSITSFQTVFLPMDDLNDPASVAILNHLDSSLVLSREIFAEGLFPAIDPLLSNSSLLQE 346

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR---PGVDLILDKA 406
           K        LV  +  ++H++++  ++ +I G +   P   LI+ KA
Sbjct: 347 KIVGKRHILLVKRVKKILHKYKQLEEMIMILGVQELEPNNRLIVKKA 393


>gi|332105887|gb|AEE01406.1| ATP synthase beta chain [Grewia orientalis]
          Length = 476

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|184127849|gb|ACC67824.1| ATP synthase beta chain [Marattia alata]
          Length = 399

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 128

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 189 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 306 LQDIIAILG 314


>gi|61968289|gb|AAX57071.1| ATP synthase beta subunit [Phyllanthus cf. fuscoluridus Hoffmann et
           al. 246]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|21633393|gb|AAM52171.1| ATP synthase beta subunit [Porana volubilis]
          Length = 471

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 21/312 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 82  GSTLGRIFNVLGAPVDNLGPVDTNTTSSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 141

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-------- 206
             G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +          
Sbjct: 142 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESGV 200

Query: 207 --EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
             E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 201 INEEKIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 258

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 376

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 377 YKELQDIIAILG 388


>gi|4995790|emb|CAB44267.1| H(+)-transporting ATP synthase [Reevesia thyrsoidea]
          Length = 486

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|62085143|gb|AAX62977.1| ATP synthase beta subunit [Spathiostemon javensis]
          Length = 482

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|123325585|gb|ABM74417.1| ATP synthase beta subunit [Burkillanthus malaccensis]
          Length = 462

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|124361808|gb|ABN09346.1| ATP synthase beta subunit [Adinandra dumosa]
 gi|124361810|gb|ABN09347.1| ATP synthase beta subunit [Cleyera japonica]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|114107140|ref|YP_740124.1| ATP synthase CF1 beta subunit [Daucus carota]
 gi|122233834|sp|Q0G9V5|ATPB_DAUCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|113200915|gb|ABI32431.1| ATP synthase CF1 beta subunit [Daucus carota]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|99640461|emb|CAJ45082.1| putative beta subunit of chloroplast ATP synthase [Culcita
           coniifolia]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 165/334 (49%), Gaps = 25/334 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    + +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNPGPV-ESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 165 KIGSFGGAGVGKTVLIMESTNNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQN 224

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V   ++E P  R     TA T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 225 ISESKVALVYGQTNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 284

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 285 ALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATTFA 342

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 343 HLDATTVLSRGLAAKGTYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEPQD 401

Query: 389 IRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           I  I    PG+D + ++    V +   I  FL Q
Sbjct: 402 IIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|7708153|emb|CAB89913.1| ATP synthase beta subunit [Antirrhinum majus]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|62085219|gb|AAX63012.1| ATP synthase beta subunit [Dillenia philippinensis]
          Length = 482

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|256370597|ref|YP_003108422.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri SMDSEM]
 gi|256009389|gb|ACU52749.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri SMDSEM]
          Length = 550

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 181/376 (48%), Gaps = 51/376 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GRV N +G  IDG   L K   LS+    + PP             TGI+VID+  P   
Sbjct: 88  GRVFNVVGDTIDGLGPLKKSKRLSIH---RDPPKFEELSTNLNILYTGIKVIDLIEPYIK 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIED----Y 209
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE I      Y
Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKSYGGLSVFAGVGERTREGNDLLREMISSGIIKY 204

Query: 210 LGDNLK--------------------KSVVVVATSDESPILRKMAPLTAVTIAEYF---- 245
               LK                    K+  V    +E P  R    L+ +T+AEY+    
Sbjct: 205 GNSFLKEMTNGKWDLTKVDKTELKKSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDYR 264

Query: 246 --SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
             S +G +VL  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +
Sbjct: 265 DSSGQGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTK 322

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V +  D+ +DP   +  + LD   VL+R +A  G YP VDPL+S SR+  K
Sbjct: 323 KGSITSIQAVYIPADDLSDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLSSTSRILSK 382

Query: 364 AWSADEKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSP 421
               ++  L +  +  ++ R++E +DI  I G     +   DK  VH+   +  FL Q P
Sbjct: 383 EVLGNDHYLCAQRVKKILQRYQELQDIIAILGIEELSE--EDKLIVHRARRVQRFLSQ-P 439

Query: 422 SDLSSEDVFQEITKKL 437
            +++ +  F  IT KL
Sbjct: 440 FNVAEQ--FTGITGKL 453


>gi|302874536|ref|YP_003843169.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium cellulovorans 743B]
 gi|307690852|ref|ZP_07633298.1| V-type ATP synthase subunit B [Clostridium cellulovorans 743B]
 gi|302577393|gb|ADL51405.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium cellulovorans 743B]
          Length = 460

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 15/278 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GRV + +G+P D    +    + D++ E ++   PA  R   ++  +TG+  ID 
Sbjct: 82  SEDMLGRVFDGMGRPKDNGPKIMPEKRVDINGEAIN---PAA-RDYPDEFIQTGVSAIDH 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIED 208
              L  GQ++ VF+GSG+  + L +  AR      +D    V+ + +G    E + F++D
Sbjct: 138 LNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLKADSKFAVVFAAIGITFEEAQFFVDD 197

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +     + +SV+ +  +++  I R   P  A+T AE+ +  KG +VL+IL  +T +  ++
Sbjct: 198 FTETGAIDRSVLFMNLANDPAIERIATPRMALTAAEFLAYEKGMHVLVILTDLTNYCEAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  L ER G    ++G++T +  + +  D+   PI D
Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTLYERAGRIRGKEGSVTQIPILTMPEDDKTHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
               I +G I+L+R L ++G  PP+D L S+SRL DK 
Sbjct: 318 LTGYITEGQIILSRELYKKGINPPIDVLPSLSRLKDKG 355


>gi|219552244|gb|ACL26837.1| ATP synthase beta chain [Reverchonia arenaria]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|219552222|gb|ACL26826.1| ATP synthase beta chain [Phyllanthus chamaecerasus]
 gi|219552224|gb|ACL26827.1| ATP synthase beta chain [Phyllanthus bourgeoisii]
 gi|219552228|gb|ACL26829.1| ATP synthase beta chain [Phyllanthus koniamboensis]
 gi|219552230|gb|ACL26830.1| ATP synthase beta chain [Phyllanthus caudatus]
 gi|219552232|gb|ACL26831.1| ATP synthase beta chain [Phyllanthus aeneus]
 gi|219552234|gb|ACL26832.1| ATP synthase beta chain [Phyllanthus guillauminii]
 gi|219552236|gb|ACL26833.1| ATP synthase beta chain [Phyllanthus vulcani]
 gi|219552248|gb|ACL26839.1| ATP synthase beta chain [Phyllanthus oligospermus]
 gi|219552252|gb|ACL26841.1| ATP synthase beta chain [Phyllanthus reticulatus]
 gi|219552254|gb|ACL26842.1| ATP synthase beta chain [Phyllanthus sp. Kawakita 23]
 gi|219552256|gb|ACL26843.1| ATP synthase beta chain [Phyllanthus liukiuensis]
 gi|219552258|gb|ACL26844.1| ATP synthase beta chain [Phyllanthus pulchroides]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|184127865|gb|ACC67832.1| ATP synthase beta chain [Marattia purpurascens]
          Length = 402

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 15  LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 71

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 72  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 131

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 132 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 191

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 192 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 249

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 250 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 308

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 309 LQDIIAILG 317


>gi|184127857|gb|ACC67828.1| ATP synthase beta chain [Marattia salicina]
          Length = 402

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 15  LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 71

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 72  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 131

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 132 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 191

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 192 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 249

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 250 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 308

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 309 LQDIIAILG 317


>gi|182417270|ref|ZP_02948621.1| V-type ATP synthase beta chain [Clostridium butyricum 5521]
 gi|237668253|ref|ZP_04528237.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182378867|gb|EDT76382.1| V-type ATP synthase beta chain [Clostridium butyricum 5521]
 gi|237656601|gb|EEP54157.1| V-type sodium ATPase, B subunit [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 459

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 144/276 (52%), Gaps = 11/276 (3%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + +G+  D G D +   +  ++I  +    M R    +  +TGI  ID   
Sbjct: 82  SEDMLGRVFDGMGRSNDNGPDIIP--EKRVDINGEAINPMARDFPSEFIQTGISAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ VF+ SG+    L +  AR      SD    ++ + +G    E + F+E++ 
Sbjct: 140 TLVRGQKLPVFSASGLPHQELAAQIARQAKVLNSDSKFAIVFAAIGITFEEAQFFVEEFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               + +SV+ +  + +  I R   P  A+T AEY +  KG  VL+I+  IT +A ++RE
Sbjct: 200 STGAIDRSVLFMNLASDPAIERIATPRMALTCAEYLAYEKGMQVLVIMTDITNYAEALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+    E+P  RGYP  ++++L  L ER G    ++G+IT +  + +  D+   PI D  
Sbjct: 260 ISAARKEVPGRRGYPGYLYTDLSTLYERAGRLRGKEGSITQIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             I +G I+L+R L ++G  PP+D L S+SRL DK 
Sbjct: 320 GYITEGQIILSRELYKKGLMPPIDVLPSLSRLKDKG 355


>gi|149174223|ref|ZP_01852850.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797]
 gi|148846768|gb|EDL61104.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797]
          Length = 471

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 9/293 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G+ +D    + + D    I  + P  + R    + F TGI+ ID+ +PL  G 
Sbjct: 97  GRMLNVFGQTVDTGAPV-ECDHWRSIHHQSPALVERPPRSEIFSTGIKAIDLLSPLERGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218
           + G+F G+G+GK+ L++    +       +SL   +GER RE  E   +      L+ +V
Sbjct: 156 KAGLFGGAGVGKTVLITELIHNVVGAHKGVSLFCGIGERCREAEELYREMQDAGVLENTV 215

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  E++   GELP
Sbjct: 216 MVFGQMNEPPGARYRVGHAALTMAEYFRDDQRQDVLLLIDNIFRFIQAGTEVSGLMGELP 275

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ S+L  L ERI       G+IT+V +V V  D+  DP A    + L   +V
Sbjct: 276 SRVGYQPTLASDLAELEERI--CTTTSGSITSVQAVYVPADDFTDPSAVHTFAHLSTSVV 333

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP +D L S S++       D   ++  S+   +  +E+ +DI
Sbjct: 334 LSRRRASEGLYPAIDLLNSSSKMLMPPIVGDHHYQVAQSVRETLANYEDLKDI 386


>gi|32526543|emb|CAD39203.1| ATP synthase subunit B [Pennantia cunninghamii]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|50604352|gb|AAT79518.1| ATP synthase [Nothofagus truncata]
 gi|50604354|gb|AAT79519.1| ATP synthase [Nothofagus fusca]
 gi|50604366|gb|AAT79525.1| ATP synthase [Nothofagus solandri]
          Length = 451

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 67  GATLGRIFNVLGEPVD---NLGPVDASTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 123

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 124 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 183

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 184 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 243

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 244 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 301

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 302 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 361

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 362 KELQDIIAILG 372


>gi|73667078|ref|YP_303094.1| F0F1 ATP synthase subunit beta [Ehrlichia canis str. Jake]
 gi|118573531|sp|Q3YS09|ATPB_EHRCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|72394219|gb|AAZ68496.1| ATP synthase F1, beta subunit [Ehrlichia canis str. Jake]
          Length = 507

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 159/311 (51%), Gaps = 24/311 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV + LG  ID    L +    ++ I S++P   +++   +   TGI+VID+  P   
Sbjct: 116 LGRVFDVLGNTIDDCGPLEESKYIIKPIYSEIPKLTDQKIATEILVTGIKVIDLLAPYLK 175

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL--- 214
           G ++G+F G+G+GK+ L+     +       +S+   VGER RE  +   + +   +   
Sbjct: 176 GGKVGLFGGAGVGKTVLIMELIHNIAKAHRGVSVFAGVGERTREGNDLYHEMIESGVINL 235

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
                 ++V+V    +E P  R    L+A+T+AEYF  S+  +VL  +D+I RF  S  E
Sbjct: 236 NEKDQSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDSENQDVLFFVDNIFRFTQSGSE 295

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+   G +P A GY  ++ +E+  + ERI  +    G+IT+V ++ V  D+  DP   + 
Sbjct: 296 ISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNNGSITSVQAIYVPADDLTDPAPATS 353

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-----EKKLVSSLTHLIHRF 383
            + LD   VL+R ++E G YP VDPL S S    +A SAD       ++   +  ++  +
Sbjct: 354 FAHLDSTTVLSRQISELGIYPAVDPLDSTS----QALSADIVGEEHYEVAKEVQRILQTY 409

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 410 KSLQDIIAILG 420


>gi|219552240|gb|ACL26835.1| ATP synthase beta chain [Phyllanthus amarus]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|195183511|dbj|BAG66969.1| ATP synthase beta subunit [Isodendrion longifolium]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  +    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029325|dbj|BAF75546.1| ATP synthase beta subunit [Tragiella anomala]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDIRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|115564937|emb|CAJ70621.1| ATP synthase beta subunit [Matudaea trinervia]
          Length = 470

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 390

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 391 YKELQDIIAILG 402


>gi|18077603|emb|CAD11918.1| ATP synthase beta subunit [Polyosma cunninghamii]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|5758878|gb|AAD50852.1| ATP synthase beta subunit [Ensete ventricosum]
          Length = 496

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLETKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|68139361|gb|AAY86045.1| ATP synthase beta subunit [Alisma plantago-aquatica]
          Length = 452

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMQVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 201 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|18077561|emb|CAC88850.1| atpD beta synthase chain [Pseudomonas fluorescens]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|156618839|ref|YP_001430121.1| ATP synthase CF1 beta subunit [Cuscuta reflexa]
 gi|231596|sp|P30399|ATPB_CUSRE RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|58333|emb|CAA43866.1| H(+)-transporting ATP synthase [Cuscuta reflexa]
 gi|156556024|emb|CAM98407.1| ATP synthase CF1 beta chain [Cuscuta reflexa]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTFTIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRLVGEEHYETAQKVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|332105863|gb|AEE01394.1| ATP synthase beta chain [Adansonia digitata]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|229002378|dbj|BAH57913.1| ATP synthase beta subunit [Potamogeton dentatus]
 gi|229002384|dbj|BAH57914.1| ATP synthase beta subunit [Potamogeton gramineus]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 102 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 218

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 219 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 278

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 279 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 336

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R+
Sbjct: 337 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQRVKETLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|123325691|gb|ABM74470.1| ATP synthase beta subunit [Microcitrus inodora]
          Length = 460

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 196 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|149384677|gb|ABR25147.1| ATP synthase beta chain [Marattia alata]
          Length = 394

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|4995177|emb|CAB44029.1| H(+)-transporting ATP synthase [Grewia occidentalis]
          Length = 484

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|4063530|gb|AAC98323.1| ATP synthase beta subunit [Bixa orellana]
          Length = 456

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E    + +    + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQIVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|4063542|gb|AAC98329.1| ATP synthase beta subunit [Cupaniopsis anacardioides]
          Length = 456

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|170178348|gb|ACB10593.1| ATP synthase beta subunit [Cornus nuttallii]
          Length = 454

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 71  IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 365

Query: 390 RLIGG 394
             I G
Sbjct: 366 IAILG 370


>gi|170178330|gb|ACB10584.1| ATP synthase beta subunit [Cornus peruviana]
          Length = 455

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 183 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 360

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 361 ELQDIIAILG 370


>gi|111283708|gb|ABH09204.1| ATPase beta subunit [Jackiella curvata]
          Length = 444

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D++    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPID---NLGPVDVNTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +
Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLSFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|61968321|gb|AAX57087.1| ATP synthase beta subunit [Thecacoris madagascariensis]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTVQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|6687548|emb|CAB64990.1| ATP synthase beta subunit [Erithalis fruticosa]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|4995057|emb|CAB43981.1| H(+)-transporting ATP synthase [Abroma augustum]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|46360714|gb|AAS89138.1| ATP synthase beta subunit [Riccia huebeneriana subsp. sullivantii]
          Length = 382

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|3850988|gb|AAC72186.1| ATP synthase beta subunit [Grevillea baileyana]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|290490142|gb|ADD31478.1| ATP synthase CF1 beta subunit protein [Antirrhinum majus]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|219552250|gb|ACL26840.1| ATP synthase beta chain [Phyllanthus flexuosus]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|164566059|gb|ABY61172.1| ATP synthase beta subunit [Danaea arbuscula]
          Length = 394

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 7   LGRIFNVLGEPVDNSGPVNVDTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|99640456|emb|CAJ45081.1| putative beta subunit of chloroplast ATP synthase [Cyathea
           grandifolia]
 gi|99640486|emb|CAJ45085.1| putative beta subunit of chloroplast ATP synthase [Cyathea arborea]
 gi|99640492|emb|CAJ45086.1| putative beta subunit of chloroplast ATP synthase [Cyathea
           divergens]
 gi|99640498|emb|CAJ45087.1| putative beta subunit of chloroplast ATP synthase [Cyathea parvula]
 gi|99640503|emb|CAJ45088.1| putative beta subunit of chloroplast ATP synthase [Cyathea
           speciosa]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|14718013|gb|AAK72748.1| ATP synthase beta subunit [Cneorum pulverulentum]
          Length = 476

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPIDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|6017802|gb|AAF01635.1| ATP synthase beta subunit [Hydrangea arborescens]
          Length = 496

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNXCPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|326200288|gb|ADZ52327.1| ATP synthase CF1 beta subunit [Asclepias syriaca]
          Length = 495

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|326803803|ref|YP_004321621.1| ATP synthase ab C terminal domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650077|gb|AEA00260.1| ATP synthase ab C terminal domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 180/368 (48%), Gaps = 17/368 (4%)

Query: 43  VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99
           V   + V  + +N D+ +G+V+ +  D   +   G G  I++ D  + F         S 
Sbjct: 24  VGYNELVEIKMQNGDSRIGEVLEVQEDKAIVQIYGGGSGINIRDSRVRFQGHPLEFGVSE 83

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR  + LG  +DG  +    + S ++  +V   M R+  ++  +TGI  ID    L 
Sbjct: 84  DIIGRTFDGLGNVVDGGPT-PIPEQSRDVNGQVINPMAREYPDEFIQTGISTIDHMNSLV 142

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN 213
            GQ++ +F+GSG+    L +  AR       D    V+ + +G    + + FI+ +    
Sbjct: 143 RGQKLPIFSGSGLPHKELAAQIARQATVLNDDENFAVVFAAMGVTFEDAQFFIDSFKETG 202

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
            + +SV+ +  +D+  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++ 
Sbjct: 203 AIDRSVMFINLADDPSIERLATPKVALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSA 262

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              E+P  RGYP  ++++L  + ER G  +  KG++T +  + +  D+   PI D    I
Sbjct: 263 ARREVPGRRGYPGYLYTDLAGIYERAGRIKDAKGSVTQIPILTMPEDDITHPIPDLTGYI 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEET 386
            +G I+L++ L  +G  PP+D L S+SRL D          D    ++ L     + +E 
Sbjct: 323 TEGQIILDKELNHQGITPPIDVLPSLSRLKDDGTGEGKTREDHADTMNQLFAAYAKGKEA 382

Query: 387 RDIRLIGG 394
           R++ ++ G
Sbjct: 383 RELAVVLG 390


>gi|295107819|emb|CBL21772.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus obeum
           A2-162]
          Length = 460

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 24/322 (7%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGK 111
           +  +G++I I  D   I      + +SLG+    L  H     +SP     GR  N +G+
Sbjct: 38  TQKIGRIIEIYEDKAVIQVFEGTDNMSLGNTHTRLTGHPMEIGLSPE--ILGRTFNGIGQ 95

Query: 112 PIDGDDSLGKGDLSMEI---MSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
           PIDG      GD++ E+   ++ +P   + R+       TGI  ID  T L  GQ++ +F
Sbjct: 96  PIDG-----LGDITPEVSLNINGLPLNPVKREYPRNYINTGISAIDGLTTLIRGQKLPIF 150

Query: 168 AGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220
           +G+G+    L +   +       SD    ++ + +G +      F   +        VV+
Sbjct: 151 SGNGLPHDKLAAQIVQQASLGGDSDENFAIVFAAMGVKYDVAEFFRRTFEESGASDHVVM 210

Query: 221 VATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPV 278
                  P++ R + P  A+T AEY +  KG ++L+IL  IT F  ++RE++++ GE+P 
Sbjct: 211 FLNLANDPVVERLLTPKIALTAAEYLAFEKGMHILVILTDITSFCEAMREVSSSKGEIPS 270

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP  ++SEL  L ER G  +   G++T +  + +  D+   PI D    I +G IVL
Sbjct: 271 RKGYPGYLYSELATLYERAGIVQGGTGSVTQIPILTMPNDDITHPIPDLTGYITEGQIVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRL 360
           +R L  +  YPP++ L S+SRL
Sbjct: 331 DRQLHGQAIYPPINVLPSLSRL 352


>gi|170178350|gb|ACB10594.1| ATP synthase beta subunit [Cornus kousa]
          Length = 450

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|219552190|gb|ACL26810.1| ATP synthase beta chain [Glochidion acuminatum]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|61968223|gb|AAX57038.1| ATP synthase beta subunit [Breynia cernua]
 gi|61968225|gb|AAX57039.1| ATP synthase beta subunit [Breynia stipitata]
 gi|61968243|gb|AAX57048.1| ATP synthase beta subunit [Glochidion puberum]
 gi|61968309|gb|AAX57081.1| ATP synthase beta subunit [Sauropus androgynus]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|12004163|gb|AAG43921.1|AF213790_1 ATP synthase beta subunit [Trientalis europaea]
          Length = 468

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718265|gb|AAK72870.1| ATP synthase beta subunit [Xanthoceras sorbifolium]
          Length = 485

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|8517628|emb|CAB94373.1| ATP synthase beta subunit [Maesa myrsinoides]
          Length = 476

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|18077545|emb|CAC88842.1| atpD beta synthase chain [Pseudomonas chlororaphis]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|119368010|dbj|BAF40500.1| ATP synthase beta subunit [Galearia filiformis]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119368018|dbj|BAF40508.1| ATP synthase beta subunit [Breynia cernua]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|118917374|dbj|BAF40486.1| ATP synthase beta subunit [Sclerolinon digynum]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|37543470|gb|AAM08916.1| ATP synthase beta subunit [Purdiaea nutans]
          Length = 462

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 193

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 194 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 253

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+    ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGTFQERI--TSTKKGSITSIQAVYVPADDLTDP 311

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 371

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 372 YKELQDIIAILG 383


>gi|7687958|emb|CAB89701.1| ATP synthase beta subunit [Astilbe taquetii]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 162/326 (49%), Gaps = 22/326 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 90  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 147 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 206

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 207 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 267 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 324

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 325 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEE 383

Query: 371 --KLVSSLTHLIHRFEETRDIRLIGG 394
             +    +   + R++E +DI  I G
Sbjct: 384 HYETAQRVKQTLQRYKELQDIIAILG 409


>gi|7708503|emb|CAB89932.1| ATP synthase beta subunit [Myriophyllum sibiricum]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDNAGQQINMTCEVQQLLGNNRVRAIAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|16416740|gb|AAL18394.1|AF313546_1 ATP synthase beta chain [Marattia attenuata]
          Length = 394

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|1352029|sp|P07137|ATPB_IPOBA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|58336|emb|CAA29393.1| unnamed protein product [Ipomoea batatas]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGYLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETARGVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|332105873|gb|AEE01399.1| ATP synthase beta chain [Fremontodendron californicum]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|313576715|gb|ADR66865.1| ATP synthase beta subunit [Ternstroemia stahlii]
 gi|313576717|gb|ADR66866.1| ATP synthase beta subunit [Ternstroemia peduncularis]
          Length = 477

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGTPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|198417867|gb|ACH87970.1| AtpD beta synthase chain [Pseudomonas chlororaphis]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|123325657|gb|ABM74453.1| ATP synthase beta subunit [Clymenia polyandra]
          Length = 461

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|194267337|gb|ACF35655.1| ATP synthase beta subunit [Roupala montana]
          Length = 497

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|113910906|gb|ABI48185.1| ATPase beta subunit [Hylocomium splendens]
          Length = 472

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 162/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+     L++  A++     V   +  ER RE      E  E  
Sbjct: 140 YRRGGKIGLFGGAGVGKTVPIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 198

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 199 VIDEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|7708570|emb|CAB89977.1| ATP synthase beta subunit [Reinwardtia indica]
          Length = 491

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|4995111|emb|CAB43998.1| H(+)-transporting ATP synthase [Colona floribunda]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|7708678|emb|CAB90018.1| ATP synthase beta subunit [Thymelaea hirsuta]
          Length = 471

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 79  ATLGRIFNVLGEPID---NLGPVDTRTTAPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 194

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDXTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|16416738|gb|AAL18393.1|AF313545_1 ATP synthase beta chain [Tmesipteris obliqua]
 gi|184127881|gb|ACC67840.1| ATP synthase beta chain [Tmesipteris obliqua]
          Length = 394

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 153/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D    I    P           F+TGI+V+D+  P
Sbjct: 5   ATLGRIFNVLGEPVD---NLGPINADKKSPIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 61

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 62  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 120

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  
Sbjct: 121 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 180

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 181 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPA 238

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 239 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQR 297

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 298 YKELQDIIAILG 309


>gi|62902857|gb|AAY19343.1| ATP synthase beta subunit [Davidsonia pruriens]
          Length = 460

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 70  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 126

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 127 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 186

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 187 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 246

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 364

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 365 KELQDIIAILG 375


>gi|32526541|emb|CAD39202.1| ATP synthase subunit B [Pennantia corymbosa]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708499|emb|CAB89937.1| ATP synthase beta subunit [Morus nigra]
          Length = 486

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTXLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|12004131|gb|AAG43905.1|AF213774_1 ATP synthase beta subunit [Anagallis arvensis]
          Length = 413

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 31  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 87

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 88  YRRGGKIGLFGGAGVGKTVLIMELITNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 147

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 148 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 207

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 208 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 265

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 266 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 325

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 326 ELQDIIAILG 335


>gi|21633385|gb|AAM52167.1| ATP synthase beta subunit [Falkia repens]
          Length = 466

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 79  GSTLGRIFNVLGEPVD---NLGPVDPTTLSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 196 VINEENIAQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|11497535|ref|NP_054943.1| ATP synthase CF1 beta subunit [Spinacia oleracea]
 gi|1703723|sp|P00825|ATPB_SPIOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|733448|gb|AAB60294.1| CF1 ATP synthase beta subunit [Spinacia oleracea]
 gi|7636116|emb|CAB88736.1| ATP synthase beta subunit [Spinacia oleracea]
 gi|33327771|gb|AAQ09249.1| ATP synthase beta subunit [Spinacia oleracea]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|254798618|ref|YP_003058270.1| CF1 beta subunit of ATP synthase [Parachlorella kessleri]
 gi|229915566|gb|ACQ90909.1| CF1 beta subunit of ATP synthase [Parachlorella kessleri]
          Length = 482

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 153/305 (50%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +   +  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 98  GRIFNVLGEPVDNLGPVNNKE-ELPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          DN
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVIDEDN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           +  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 217 ISASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       D   +   ++   + R++E +DI
Sbjct: 335 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDTHYQCAQNVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|241912852|gb|ACS72104.1| AtpB [Gomphichis valida]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINTIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|170178322|gb|ACB10580.1| ATP synthase beta subunit [Cornus oblonga]
          Length = 455

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 183 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 360

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 361 ELQDIIAILG 370


>gi|168040472|ref|XP_001772718.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675943|gb|EDQ62432.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 481

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 31/286 (10%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--------------MEIMSKVPPAMNRQRVEKGFKTG 148
           GR+IN +G+ ID    + K  +               + I  + P  +++    +  +TG
Sbjct: 98  GRIINVIGEAIDERGDISKCTIHGFKRYLQWMFVEHVLGIHREAPAFVDQGTEMEILETG 157

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE   
Sbjct: 158 IKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGFSVFAG-VGERTREGND 216

Query: 202 -VREFIED---YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254
             +E IE     LGD     K  +V    +E P  R    LT +T+AE+F  ++G +VL 
Sbjct: 217 LYKEMIESGVIKLGDKQMESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLF 276

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ 
Sbjct: 277 FIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTQKGSITSVQAIY 334

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 335 VPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 380


>gi|118917418|dbj|BAF40524.1| ATP synthase beta subunit [Homalium foetidum]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910796|gb|ABI48130.1| ATPase beta subunit [Schistochila nobilis]
          Length = 456

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|7688031|emb|CAB89721.1| ATP synthase beta subunit [Peltoboykinia tellimoides]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 161/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 90  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 147 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 206

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 207 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 267 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 324

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 325 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 384

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            ++   +   + R++E +DI  I G
Sbjct: 385 YEIAQRVKQTLQRYKELQDIIAILG 409


>gi|7708662|emb|CAB90000.1| ATP synthase beta subunit [Strychnos nux-vomica]
          Length = 475

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|4995757|emb|CAB44246.1| H(+)-transporting ATP synthase [Pachira aquatica]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|50604350|gb|AAT79517.1| ATP synthase [Nothofagus alessandri]
 gi|50604356|gb|AAT79520.1| ATP synthase [Nothofagus glauca]
 gi|50604358|gb|AAT79521.1| ATP synthase [Nothofagus gunnii]
 gi|50604362|gb|AAT79523.1| ATP synthase [Nothofagus moorei]
 gi|50604364|gb|AAT79524.1| ATP synthase [Nothofagus obliqua]
 gi|50604368|gb|AAT79526.1| ATP synthase [Nothofagus cunninghamii]
 gi|58294354|gb|AAW70093.1| ATP synthase CF1 beta chain [Nothofagus nitida]
          Length = 451

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 67  GATLGRIFNVLGEPVD---NLGPVDASTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 123

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 124 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 183

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 184 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 243

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 244 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 301

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 302 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 361

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 362 KELQDIIAILG 372


>gi|4206604|gb|AAD11733.1| ATP synthase beta subunit [Ptaeroxylon obliquum]
          Length = 483

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|57868946|gb|AAW57469.1| ATP synthase beta subunit [Cleyera japonica]
          Length = 485

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 47  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 107 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 223

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 224 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 283

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 284 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 341

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 342 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 401

Query: 390 RLIGG 394
             I G
Sbjct: 402 IAILG 406


>gi|257852930|gb|ACV71476.1| ATP synthase beta subunit [Endodesmia calophylloides]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|241912924|gb|ACS72140.1| AtpB [Stenoptera acuta]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|241912862|gb|ACS72109.1| AtpB [Goodyera repens]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+G++ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|156530115|gb|ABU75154.1| AtpB [Castela coccinea]
          Length = 485

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I  + P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|155029323|dbj|BAF75545.1| ATP synthase beta subunit [Tragia betonicifolia]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRVTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119368036|dbj|BAF40531.1| ATP synthase beta subunit [Orthion subsessile]
 gi|195183518|dbj|BAG66972.1| ATP synthase beta subunit [Mayanaea caudata]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|99640481|emb|CAJ45084.1| putative beta subunit of chloroplast ATP synthase [Cyathea alata]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|21684889|emb|CAD11571.1| ATP synthase beta subunit [Mesanthemum radicans]
          Length = 475

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 85  GTTLGRIFNVLGDPID---NLGPVDPSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|14718151|gb|AAK72814.1| ATP synthase beta subunit [Beaucarnea recurvata]
          Length = 483

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|4995095|emb|CAB44009.1| H(+)-transporting ATP synthase [Ceiba speciosa]
          Length = 486

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|12004167|gb|AAG43923.1|AF213792_1 ATP synthase beta subunit [Theophrasta americana]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 107 LGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 223

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
            +NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 224 EENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQLRIVGEEHYETAQRVKQTLQRYKEL 401

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 402 QDIIAILG 409


>gi|9799484|gb|AAF98992.1| ATP synthase beta subunit [Paeonia brownii]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D++GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 50  KGQDSIGQPINVTCEVQQLLGNNRVRTVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|170293971|gb|ACB13079.1| ATP synthase beta subunit [Bryopsis vestita]
          Length = 366

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 160/312 (51%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+ +D   +LG  + +  ++I    P  ++       F+TGI+V+D+  P  
Sbjct: 21  LGRIFNVLGETVD---NLGPVETETGLQIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYR 77

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +           
Sbjct: 78  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 136

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            ED L ++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 137 NEDQLSES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 194

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ ++ V  D+  DP 
Sbjct: 195 AGSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPA 252

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R
Sbjct: 253 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKQTLQR 311

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 312 YKELQDIIAILG 323


>gi|123325697|gb|ABM74473.1| ATP synthase beta subunit [Micromelum minutum]
          Length = 462

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|195183546|dbj|BAG66984.1| ATP synthase beta subunit [Viola philippica]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 35/368 (9%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTIGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMQVVDTGAPLSVPVGGTTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------ED 208
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E 
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEA 217

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
            +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 218 NIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R++E 
Sbjct: 334 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|195183527|dbj|BAG66976.1| ATP synthase beta subunit [Noisettia orchidiflora]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|115564921|emb|CAJ70591.1| ATP synthase beta subunit [Loropetalum chinense]
          Length = 466

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 388

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 389 YKELQDIIAILG 400


>gi|18077601|emb|CAD11917.1| ATP synthase beta subunit [Paracryphia alticola]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|5001603|gb|AAD37048.1|AF092122_1 ATP synthase beta subunit [Eucryphia cordifolia]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|290490146|gb|ADD31480.1| ATP synthase CF1 beta subunit protein [Dillenia indica]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|170178340|gb|ACB10589.1| ATP synthase beta subunit [Cornus sessilis]
          Length = 454

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|184127861|gb|ACC67830.1| ATP synthase beta chain [Marattia oreades]
          Length = 399

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 128

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 189 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 306 LQDIIAILG 314


>gi|184127859|gb|ACC67829.1| ATP synthase beta chain [Marattia attenuata]
          Length = 399

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D+ +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 128

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 189 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 306 LQDIIAILG 314


>gi|149384673|gb|ABR25145.1| ATP synthase beta chain [Lygodium reticulatum]
          Length = 426

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVEGGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 333 LQDIIAI----PGLD 343


>gi|21633263|gb|AAM52106.1| ATP synthase beta subunit [Ipomoea tiliacea]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  + + +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVETNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633395|gb|AAM52172.1| ATP synthase beta subunit [Metaporana parvifolia]
          Length = 481

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   S  I    P  +        F+TGI+V+D+  
Sbjct: 93  GSTLGRIFNVLGEPVD---NLGPVDTNTSSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|21633333|gb|AAM52141.1| ATP synthase beta subunit [Convolvulus mauritanicus]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDANTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|6687333|emb|CAB64912.1| ATP synthase beta subunit [Campsis radicans]
 gi|6689560|emb|CAB65487.1| ATP synthase beta subunit [Veronica anagallis-aquatica]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|3850984|gb|AAC72184.1| ATP synthase beta subunit [Opisthiolepis heterophylla]
 gi|3850986|gb|AAC72185.1| ATP synthase beta subunit [Buckinghamia celsissima]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|5758921|gb|AAD50895.1| ATP synthase beta subunit [Zingiber gramineum]
          Length = 485

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIELDTKFLIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|332105861|gb|AEE01393.1| ATP synthase beta chain [Craigia yunnanensis]
 gi|332105867|gb|AEE01396.1| ATP synthase beta chain [Excentrodendron hsienmu]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|119368032|dbj|BAF40520.1| ATP synthase beta subunit [Erythroxylum novocaledonicum]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|56675514|emb|CAB44250.2| H(+)-transporting ATP synthase [Pterospermum celebicum]
          Length = 482

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|7708626|emb|CAB89984.1| ATP synthase beta subunit [Rubia tinctorum]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|6017810|gb|AAF01639.1| ATP synthase beta subunit [Limeum sp. Hoot 983]
          Length = 494

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|66276285|gb|AAY44157.1| ATP synthase beta subunit [Marah macrocarpus]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62902855|gb|AAY19342.1| ATP synthase beta subunit [Connarus championii]
          Length = 486

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|62902859|gb|AAY19344.1| ATP synthase beta subunit [Elaeocarpus reticulatus]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|229002312|dbj|BAH57919.1| ATP synthase beta subunit [Potamogeton maackianus]
          Length = 491

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R+
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361672|gb|ABN09278.1| ATP synthase beta subunit [Diospyros glandulosa]
 gi|124361682|gb|ABN09283.1| ATP synthase beta subunit [Diospyros kaki]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|6687282|emb|CAB64900.1| ATP synthase beta subunit [Cornus officinalis]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|7708636|emb|CAB89985.1| ATP synthase beta subunit [Santalum album]
          Length = 469

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ+I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 26  KGRDTMGQLINVACEVQQLLGNYRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGEATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 86  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GDN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 143 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQN 202

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 203 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 263 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 320

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 321 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 380

Query: 390 RLIGG 394
             I G
Sbjct: 381 IAILG 385


>gi|12004139|gb|AAG43909.1|AF213778_1 ATP synthase beta subunit [Lysimachia minoricensis]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|257852984|gb|ACV71503.1| ATP synthase beta subunit [Rourea minor]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|170178336|gb|ACB10587.1| ATP synthase beta subunit [Cornus eydeana]
          Length = 454

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|170178324|gb|ACB10581.1| ATP synthase beta subunit [Cornus walteri]
          Length = 450

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|119368002|dbj|BAF40490.1| ATP synthase beta subunit [Malpighia glabra]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910898|gb|ABI48181.1| ATPase beta subunit [Thuidium recognitum]
          Length = 472

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|56675898|emb|CAB90095.2| ATP synthase beta subunit [Cornus mas]
          Length = 464

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|4995858|emb|CAB44290.1| H(+)-transporting ATP synthase [Tilia platyphyllos]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|4995705|emb|CAB44230.1| H(+)-transporting ATP synthase [Microcos latistipulata]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|50604360|gb|AAT79522.1| ATP synthase [Nothofagus menziesii]
          Length = 451

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 67  GATLGRIFNVLGEPVD---NLGPVDASTRSSIHRSAPAFIQLDTKLSIFETGIKVVDLLA 123

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 124 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 183

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 184 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 243

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 244 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 301

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 302 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 361

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 362 KELQDIIAILG 372


>gi|4731151|gb|AAD28365.1|AF095731_1 ATP synthase beta subunit [Berzelia lanuginosa]
          Length = 467

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|34500921|ref|NP_904106.1| ATP synthase CF1 beta subunit [Amborella trichopoda]
 gi|75325845|sp|Q70XZ6|ATPB_AMBTC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|34481636|emb|CAD45114.1| ATPase beta subunit [Amborella trichopoda]
          Length = 500

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 107 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 163

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 164 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 223

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  +
Sbjct: 224 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQA 283

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 284 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 341

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 342 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 401

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 402 ELQDIIAILG 411


>gi|124361804|gb|ABN09344.1| ATP synthase beta subunit [Madhuca macrophylla]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|20269408|gb|AAM17931.1| ATP synthase beta subunit [Enkianthus campanulatus]
          Length = 420

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R     TA+T+ EYF      +VLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARXRVGFTALTMXEYFRDVNKQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  K+   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYKIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|14718240|gb|AAK72858.1| ATP synthase beta subunit [Tamarix pentandra]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718126|gb|AAK72802.1| ATP synthase beta subunit [Meliosma veitchiorum]
          Length = 474

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 390

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 391 YKELQDIIAILG 402


>gi|16416752|gb|AAL18399.1|AF313553_1 ATP synthase beta chain [Cyathea poeppigii]
          Length = 395

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|323149089|ref|YP_004222653.1| ATP synthase CF1 beta subunit [Anthriscus cerefolium]
 gi|289645582|gb|ADD13645.1| ATP synthase CF1 beta subunit [Anthriscus cerefolium]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  + S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVNTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|253559486|gb|ACT32428.1| ATP synthase beta subunit [Trithuria filamentosa]
          Length = 426

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 152/305 (49%), Gaps = 18/305 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +  G  +  I    P           F+TGI+V+D+  P 
Sbjct: 34  GATLGRIFNVLGEPIDNLGPVDTGT-TFSIHRSAPAFTELDTKLSIFETGIKVVDLLAPY 92

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 93  RRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVI 152

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              ++ KS V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 153 NEQDIAKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQAG 212

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 213 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 270

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 271 TTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQRYK 329

Query: 385 ETRDI 389
           E +DI
Sbjct: 330 ELQDI 334


>gi|219552212|gb|ACL26821.1| ATP synthase beta chain [Phyllanthus acidus]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|16943664|emb|CAD10758.1| ATP synthase, beta subunit [Calibanus hookerii]
          Length = 493

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718005|gb|AAK72744.1| ATP synthase beta subunit [Chrysolepis sempervirens]
          Length = 470

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDPYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|3850978|gb|AAC72181.1| ATP synthase beta subunit [Embothrium coccineum]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085163|gb|AAX62986.1| ATP synthase beta subunit [Microdesmis puberula]
          Length = 482

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---NLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 213 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIIAILG 400


>gi|306485981|gb|ADM92639.1| ATP synthase CF1 beta subunit [Davidia involucrata]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|219552184|gb|ACL26807.1| ATP synthase beta chain [Glochidion rubrum]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|20269410|gb|AAM17932.1| ATP synthase beta subunit [Eurya sp. Chung & Anderberg 1406]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|24940248|emb|CAD43382.1| ATP synthase beta subunit [Nonea versicolor]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14717958|gb|AAK72721.1| ATP synthase beta subunit [Bauera rubioides]
          Length = 481

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|19033083|gb|AAL83526.1|AF408798_1 ATP synthase beta subunit [Mesotaenium caldariorum]
          Length = 402

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + S  + I    P           F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---NLGPVNTSTTLPIHRSAPEFTQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   ++  +    +   + R+
Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGSEHYETAQGVKQTLQRY 331

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 332 KELQDIIAILG 342


>gi|20269434|gb|AAM17944.1| ATP synthase beta subunit [Planchonella obovata]
          Length = 470

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|7688413|emb|CAB89735.1| ATP synthase beta subunit [Valeriana officinalis]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGAPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 217

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF 
Sbjct: 218 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D   +    +   + R
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDXHYETAQRVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|20467385|gb|AAL27823.1| ATPase beta subunit [Ephedra major]
          Length = 447

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S       P PA ++  +    F+TGI+V+D+  P  
Sbjct: 82  LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 138

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+ +GK+ L+     +         +   VGER RE  +   +     +  
Sbjct: 139 RGGKIGLFGGAXVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 198

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 199 EKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 258

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 259 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 316

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S  L  +       ++   +   + R++E 
Sbjct: 317 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 376

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 377 QDIIAILG 384


>gi|7708528|emb|CAB89946.1| ATP synthase beta subunit [Oncotheca balansae]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|18077539|emb|CAC88839.1| atpD beta synthase chain [Pseudomonas agarici]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|320353379|ref|YP_004194718.1| alternate F1F0 ATPase, F1 subunit beta [Desulfobulbus propionicus
           DSM 2032]
 gi|320121881|gb|ADW17427.1| alternate F1F0 ATPase, F1 subunit beta [Desulfobulbus propionicus
           DSM 2032]
          Length = 464

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 150/294 (51%), Gaps = 11/294 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV N  G+ IDG   L  G+     + + P ++  R    +  +TGI+ +D+  PL  G
Sbjct: 86  GRVFNVFGETIDGGTPLAGGEWRS--IHQTPVSLAERGTQSQVLQTGIKALDLLVPLERG 143

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            + G+F G+G+GK+ L++    +       +SL   +GER RE  E + E      L K+
Sbjct: 144 GKAGLFGGAGVGKTVLITELINNIVGQYEGVSLFCGIGERSREAEEIYREIEKAGVLDKT 203

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++V    +E+P  R      A+T+AEYF   +  +VLL++D++ RF  +  EI+   G L
Sbjct: 204 IMVFGQMNEAPGARFRVGHAALTMAEYFRDVQKRDVLLLIDNVFRFIQAGLEISGLMGRL 263

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ SEL  L ERI       G IT++ +V V  D+  DP A    + L   I
Sbjct: 264 PSRVGYQPTLASELAELEERI--CNTVNGAITSIQAVYVPADDFTDPAATHTFAHLSATI 321

Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           VL+R  A EG YP +D L S S+ L+ +       ++   +   +  +E+ +DI
Sbjct: 322 VLSRKRASEGFYPAIDLLRSSSKMLSPQIVGKRHYQVAQEIKKTLAVYEDLKDI 375


>gi|270313029|gb|ACZ73596.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 470

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNLAESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSXTSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|291545051|emb|CBL18160.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus sp. 18P13]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 20/326 (6%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISP-SACWCGRVIN 107
           +H    ++ LG+V+ I+ D   +      + +SL +    + GR    P S    GRV N
Sbjct: 32  LHLEDGTERLGRVVEISGDKAVLQVFEGTKGLSLKNTKTKFLGRPMEMPLSEEVLGRVFN 91

Query: 108 ALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
             GKPIDG      GD+  E    I  K    + R       +TGI  ID    L  GQ+
Sbjct: 92  GAGKPIDG-----LGDIFPEKFADINGKPLNPVARTYPRNYIRTGISSIDCLMTLIRGQK 146

Query: 164 IGVFAGSGIGKSTLLSMFARS-----DCFDK--VIISLVGERGREVREFIEDYLGDNLKK 216
           + +F+GSG+  + L     R      D  +K  V+ + +G +      F + +    + +
Sbjct: 147 LPIFSGSGLSHNKLAVQIVRQAQIAEDSGEKFAVVFAAMGVKNDVADYFRKSFEDSGVLQ 206

Query: 217 SVVVVATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274
           +V +       PI+ R + P  A+T+AEY +  K  ++L+IL  +T +A ++RE +++ G
Sbjct: 207 NVAMFLNLSNDPIIERILTPRCALTVAEYLAYEKNMHILVILTDMTSYAEALREFSSSKG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  +GYP  ++S+L  L ER G     KG++T +  + +  D+   P+ D    I +G
Sbjct: 267 EIPGRKGYPGYLYSDLASLYERAGIVNGAKGSVTQIPILTMPNDDITHPVPDLTGYITEG 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRL 360
            IVL+R+L + G YPP+  L S+SRL
Sbjct: 327 QIVLDRNLDQTGIYPPISVLPSLSRL 352


>gi|241912886|gb|ACS72121.1| AtpB [Porphyrostachys pilifera]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|241912872|gb|ACS72114.1| AtpB [Myrosmodes nubigena]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|257052514|ref|YP_003130347.1| V-type ATP synthase subunit B [Halorhabdus utahensis DSM 12940]
 gi|256691277|gb|ACV11614.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Halorhabdus utahensis DSM 12940]
          Length = 471

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 25/361 (6%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRV 105
           +  G      GQV+    D V I       GI  E S+    F     ++  +    GRV
Sbjct: 31  IEVGDGDTRRGQVLESTSDHVAIQVFESTQGIDRECSV---RFLGETMKMPVTEDLLGRV 87

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           ++  G+PIDG   +   +   +I+       +R+   +  +TGI  ID    L  GQ++ 
Sbjct: 88  LDGTGRPIDGGPDIVP-EQRQDIVGAAINPFSREYPREFIQTGISAIDGMNTLVRGQKLP 146

Query: 166 VFAGSGIGKSTLLSMFARSDCFD----------KVIISLVGERGREVREFIEDYLGDN-L 214
           +F+GSG+  + L    AR                VI + +G    E  EF++D+     L
Sbjct: 147 LFSGSGLPHNELALQIARQAEVPEEDDDEESEFAVIFAAMGITAEEANEFMDDFERTGAL 206

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
           ++SVV +  +D+  + R + P  A+T AEY +  KG +VL I+  +T +  ++REI    
Sbjct: 207 ERSVVFMNLADDPAVERTITPRLALTTAEYLAFEKGYHVLTIMTDMTNYCEALREIGAAR 266

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L  L ER G  E  +G+IT +  + +  D+   PI D    I +
Sbjct: 267 EEVPGRRGYPGYMYTDLANLYERAGRIEGVEGSITQIPILTMPSDDDTHPIPDLTGYITE 326

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFEETRD 388
           G I ++R L  +G  PP+    S+SRL D+         D   + S L       E+ RD
Sbjct: 327 GQIYVDRGLNSQGVRPPIYVPTSLSRLMDEGIGEGLTREDHGDVQSQLYAAYAEAEDLRD 386

Query: 389 I 389
           +
Sbjct: 387 L 387


>gi|65332598|gb|AAY42223.1| ATP synthase beta subunit [Anisophyllea cinnamomoides]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|124361674|gb|ABN09279.1| ATP synthase beta subunit [Diospyros glaucifolia]
 gi|124361688|gb|ABN09286.1| ATP synthase beta subunit [Diospyros lotus]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|115564945|emb|CAJ70600.1| ATP synthase beta subunit [Tiarella cordifolia]
          Length = 445

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 161/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 81  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 137

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 138 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 197

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 198 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 257

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 258 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 315

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 316 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 375

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            ++   +   + R++E +DI  I G
Sbjct: 376 YEIAQRVKQTLQRYKELQDIIAILG 400


>gi|21633331|gb|AAM52140.1| ATP synthase beta subunit [Convolvulus assyricus]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMNESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708624|emb|CAB89982.1| ATP synthase beta subunit [Roussea simplex]
          Length = 480

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 205

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 206 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 265

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 266 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTQKGSITSIQAVYVPADDLTDP 323

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R
Sbjct: 324 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKETLQR 383

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 384 YKELQDIIAILG 395


>gi|7708464|emb|CAB89921.1| ATP synthase beta subunit [Koelreuteria paniculata]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|21633265|gb|AAM52107.1| ATP synthase beta subunit [Ipomoea batatas]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  + + +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GSTLGRIFNVLGQPVD---NLGPVETNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|81176257|ref|YP_398336.1| ATP synthase CF1 beta subunit [Lactuca sativa]
 gi|118573691|sp|Q332X1|ATPB_LACSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|78675175|dbj|BAE47601.1| ATP synthase CF1 beta chain [Lactuca sativa]
 gi|88656990|gb|ABD47240.1| ATP synthase CF1 beta subunit [Lactuca sativa]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQEVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|323715468|gb|ADY04802.1| ATP synthase beta subunit [Deinanthe bifida]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 101 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 159

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 160 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 219

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 220 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 279

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 280 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 337

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 338 TTFAHLDATTVLSRGLAAKGIYPTVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 397

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 398 LQDIIAILG 406


>gi|114329663|ref|YP_740482.1| ATP synthase CF1 beta subunit [Citrus sinensis]
 gi|122166176|sp|Q09MH1|ATPB_CITSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|113952629|gb|ABI49027.1| ATP synthase CF1 beta subunit [Citrus sinensis]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|61968311|gb|AAX57082.1| ATP synthase beta subunit [Savia bahamensis]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|21684887|emb|CAD11570.1| ATP synthase beta subunit [Mesanthemum sp. van der Werff and
           McPherson 13574]
          Length = 464

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 70  GTTLGRIFNVLGDPID---NLGPVDPSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 126

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 127 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 186

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 187 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 246

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 364

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 365 KELQDIIAILG 375


>gi|4995181|emb|CAB44038.1| H(+)-transporting ATP synthase [Helicteres baruensis]
          Length = 472

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 196 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|6017838|gb|AAF01653.1| ATP synthase beta subunit [Heuchera sanguinea]
          Length = 496

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 161/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 88  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 144

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 145 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 204

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 205 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 264

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 265 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 322

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 323 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 382

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            ++   +   + R++E +DI  I G
Sbjct: 383 YEIAQRVKQTLQRYKELQDIIAILG 407


>gi|5758914|gb|AAD50888.1| ATP synthase beta subunit [Sparganium eurycarpum]
          Length = 496

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085182|gb|AAX62995.1| ATP synthase beta subunit [Podocalyx loranthoides]
          Length = 476

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 204

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 205 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 264

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 265 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 322

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       D+  +    +   + R
Sbjct: 323 APATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPKIVGDKHYETAQRVKQTLQR 382

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 383 YKELQDIIAILG 394


>gi|18077553|emb|CAC88846.1| atpD beta synthase chain [Pseudomonas fluorescens]
 gi|18077555|emb|CAC88847.1| atpD beta synthase chain [Pseudomonas fluorescens]
 gi|18077559|emb|CAC88849.1| atpD beta synthase chain [Pseudomonas fluorescens]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|313576703|gb|ADR66859.1| ATP synthase beta subunit [Ternstroemia impressa]
          Length = 469

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 91  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 207

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 208 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 267

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 268 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 326 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 385

Query: 390 RLIGG 394
             I G
Sbjct: 386 IAILG 390


>gi|123325623|gb|ABM74436.1| ATP synthase beta subunit [Citrus junos]
          Length = 461

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLP 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|123325701|gb|ABM74475.1| ATP synthase beta subunit [Murraya paniculata]
          Length = 466

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|21633345|gb|AAM52147.1| ATP synthase beta subunit [Odonellia hirtiflora]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 155/306 (50%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDI 389
           +E +DI
Sbjct: 397 KELQDI 402


>gi|14718026|gb|AAK72754.1| ATP synthase beta subunit [Davidsonia pruriens]
          Length = 407

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 28  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 84

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 85  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 144

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 145 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 204

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 205 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 262

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 263 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|75330483|sp|Q8MBM3|ATPB_CONAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633327|gb|AAM52138.1| ATP synthase beta subunit [Convolvulus arvensis]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|323715438|gb|ADY04787.1| ATP synthase beta subunit [Davidia involucrata]
          Length = 452

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 71  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 127

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 128 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 187

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 188 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 247

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 248 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 305

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 306 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 365

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 366 KELQDIIAILG 376


>gi|302567339|gb|ADL41368.1| ATP synthase B subunit [Choricystis minor]
          Length = 367

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   +  + I    P  ++       F+TGI+V+D+  P   G
Sbjct: 21  LGRIFNVLGEPVDNMGPVNTKE-GLPIHRSAPAFVDLDTKLAIFETGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD- 212
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  + D 
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESGVIDE 138

Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL  S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 139 KNLSGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 198

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 256

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E 
Sbjct: 257 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKQTLQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|219552266|gb|ACL26848.1| ATP synthase beta chain [Flueggea virosa]
          Length = 423

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|113910766|gb|ABI48115.1| ATPase beta subunit [Ricciocarpos natans]
          Length = 469

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 80  ATLGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 137 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 196

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 197 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|61968265|gb|AAX57059.1| ATP synthase beta subunit [Lingelsheimia sp. Rabenantoandro et al.
           1115]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|52082866|gb|AAU26014.1| ATPase beta subunit [Piper aduncum]
          Length = 470

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|4995846|emb|CAB44284.1| H(+)-transporting ATP synthase [Theobroma cacao]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|21633329|gb|AAM52139.1| ATP synthase beta subunit [Convolvulus sagittatus]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|46360702|gb|AAS89132.1| ATP synthase beta subunit [Pallavicinia lyellii]
          Length = 381

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 158/307 (51%), Gaps = 22/307 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 3   RIFNVLGEPVD---NLGPVDTGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 59

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 60  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQ 119

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 120 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 179

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 180 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 237

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 238 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 296

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 297 DIIAISG 303


>gi|66276261|gb|AAY44145.1| ATP synthase beta subunit [Coccinia sessilifolia]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 87  ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 143

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 144 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 203

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 204 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 322 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 381

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 382 ELQDIIAILG 391


>gi|156937472|ref|YP_001435268.1| V-type ATP synthase subunit B [Ignicoccus hospitalis KIN4/I]
 gi|172044466|sp|A8AAA9|VATB_IGNH4 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|156566456|gb|ABU81861.1| Sodium-transporting two-sector ATPase [Ignicoccus hospitalis
           KIN4/I]
          Length = 471

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 148/271 (54%), Gaps = 9/271 (3%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR++NALG+PIDG   + K      +  +      R+  ++  +TGI  ID    
Sbjct: 88  SEDMLGRIMNALGEPIDGGAPI-KAVEKRNVWGEPINPYAREYPDEFIETGISAIDGMNS 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLG 211
           L  GQ++ +F+GSG+  + L +  AR            V+ + VG +  E+  F + +  
Sbjct: 147 LVRGQKLPIFSGSGLPHNKLAAQIARQATVRGEEESFAVVFAAVGIQYDELLFFKKAFEE 206

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
              + ++ + V+ ++E  +++ + P  A+T+AEY + + D +VL+I+  +T +  ++REI
Sbjct: 207 TGAISRTAMFVSLANEPAMMKIVTPRAALTLAEYLAFQKDMHVLVIITDMTNYCEALREI 266

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           + +  E+P  +GYP  ++++L  + ER G  +  KG+IT +  + +  D+   PI D   
Sbjct: 267 SASREEVPSRQGYPGYMYTDLATIYERAGRVKGSKGSITQMPILTMPNDDITHPIPDLTG 326

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            I +G IVL+R L  +G YPP++ L S+SRL
Sbjct: 327 YITEGQIVLSRDLHNKGIYPPINVLMSLSRL 357


>gi|155029375|dbj|BAF75573.1| ATP synthase beta subunit [Spirostachys africana]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|138277481|gb|AAQ09243.2| ATP synthase beta subunit [Phytolacca americana]
          Length = 495

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|119368190|dbj|BAF40438.1| ATP synthase beta subunit [Trigonia boliviana]
          Length = 486

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|115564923|emb|CAJ70592.1| ATP synthase beta subunit [Maingaya malayana]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 388

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 389 YKELQDIIAILG 400


>gi|14718228|gb|AAK72852.1| ATP synthase beta subunit [Sparganium americanum]
          Length = 483

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|58081508|gb|AAW65229.1| AtpB [Jensenia connivens]
          Length = 382

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDTGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E   L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTETGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|62902873|gb|AAY19351.1| ATP synthase beta subunit [Oxalis stricta]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|313576705|gb|ADR66860.1| ATP synthase beta subunit [Ternstroemia sp. WH-2010]
          Length = 475

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 101 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 217

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 218 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 277

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 278 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 335

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 336 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 395

Query: 390 RLIGG 394
             I G
Sbjct: 396 IAILG 400


>gi|241912896|gb|ACS72126.1| AtpB [Pristiglottis montana]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|149384459|gb|ABR25052.1| ATP synthase beta chain [Cyathea alata]
 gi|149384461|gb|ABR25053.1| ATP synthase beta chain [Cyathea horrida]
 gi|149384463|gb|ABR25054.1| ATP synthase beta chain [Cyathea multiflora]
          Length = 394

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|113910928|gb|ABI48196.1| ATPase beta subunit [Azolla sp. Qiu 02051]
          Length = 407

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 62  LGRIFNVLGEPVD---NMGPVESSIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 118

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 119 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 178

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 179 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGS 238

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 239 EVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 296

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R  A +G YP VDPL S S +  + W   A+  +    +   + R++E
Sbjct: 297 TFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKE 355

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 356 LQDIIAILG 364


>gi|62902877|gb|AAY19353.1| ATP synthase beta subunit [Ziziphus obtusifolia]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 32  KGQDTVGQKINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 92  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 208

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 209 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 268

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 269 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 326

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 327 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 386

Query: 390 RLIGG 394
             I G
Sbjct: 387 IAILG 391


>gi|313904980|ref|ZP_07838351.1| H(+)-transporting two-sector ATPase [Eubacterium cellulosolvens 6]
 gi|313470237|gb|EFR65568.1| H(+)-transporting two-sector ATPase [Eubacterium cellulosolvens 6]
          Length = 457

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 13/304 (4%)

Query: 98  SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + +G+ IDG  D L    L +  +   P A  R    +  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGMGRTIDGGPDILPDARLDINGLPMNPAA--RAYPSEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ +F+ SG+  + L +  AR      +D    V+ + +G    E   F E + 
Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVVGTDEPFAVVFAAMGITYEEANYFQESFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
               + ++V+ +  +++  + R   P  A+T AEY + + D +VL+IL  IT +A ++RE
Sbjct: 200 ETGAIDRTVLFINLANDPAVERISTPRMALTAAEYLAFEKDMHVLVILTDITNYADALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  L ER G  + +KG+IT V  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLATLYERAGRLKGKKGSITMVPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE--KKLVSSLTHLIHRFEET 386
             I +G I+L+R L  +G  PP+D L S+SRL DK     +  K   +++  L   +   
Sbjct: 320 GYITEGQIILSRELYRKGITPPIDVLPSLSRLKDKGIGEGKTRKDHAATMNQLFAAYARG 379

Query: 387 RDIR 390
           +D +
Sbjct: 380 KDAK 383


>gi|302567341|gb|ADL41369.1| ATP synthase B subunit [Chlorella vulgaris]
          Length = 366

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+ N LG+P+D    +   D  + I    P  ++       F++GI+V+D+  P 
Sbjct: 18  AATLGRIFNVLGEPVDNLGPVNTKD-QLPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPY 76

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 77  RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 136

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AE+F      +VLL +D+I RF  + 
Sbjct: 137 NESNISESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDINKQDVLLFIDNIFRFVQAG 196

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 197 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 254

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R+LA +G YP VDPL S S +       D+  +   ++   + R++E
Sbjct: 255 TTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|157689146|gb|ABV65129.1| ATP synthase CF1 beta subunit [Cornus florida]
          Length = 498

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|42559028|gb|AAS20200.1| ATP synthase beta subunit [Sparganium eurycarpum]
          Length = 480

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|56675813|emb|CAC60317.2| ATP synthase beta subunit [Villarsia capitata]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|52082860|gb|AAU26011.1| ATPase beta subunit [Piper hispidum]
          Length = 470

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|7708197|emb|CAB90035.1| ATP synthase beta subunit [Coffea arabica]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGAVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|21633359|gb|AAM52154.1| ATP synthase beta subunit [Cladostigma hildebrandtioides]
          Length = 490

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|5001597|gb|AAD37045.1|AF092119_1 ATP synthase beta subunit [Didymeles perrieri]
          Length = 494

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|4206618|gb|AAD11740.1| ATP synthase beta subunit [Nymania capensis]
          Length = 417

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPXVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIXILG 397


>gi|295109101|emb|CBL23054.1| ATP synthase F1 subcomplex alpha subunit [Ruminococcus obeum
           A2-162]
          Length = 509

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 171/369 (46%), Gaps = 10/369 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
           N G    +  + V I   G  E I  G  V   G+    P      GRV+NALG+PIDG 
Sbjct: 59  NFGMAQNLEENSVSIVIFGSDENIGEGQTVKRTGKVVSVPVGEAMIGRVVNALGQPIDGA 118

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +    + +K P    R+ V +  +TGI+ ID   P+  GQR  +      GK+T
Sbjct: 119 GPVDTKEFR-PVETKAPGICERRSVYQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTT 177

Query: 177 LLS-MFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +         D + I + +G++   V   +E+   +  +  ++VV AT+ ES  L+ +
Sbjct: 178 IATDTIINQKGKDVICIYVAIGQKRSTVASLVENLTRNGAMDYTIVVAATASESSPLQYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF +KG +VL+I D +++ A + R ++      P    YP  VF    RL
Sbjct: 238 APYSGCAMGEYFMNKGKDVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER    + E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V
Sbjct: 298 LERAAKLDDEHGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMPAV 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +P  SVSR+   A     KK+  +L  +  ++   R+++    +   +D      + Q  
Sbjct: 358 NPGISVSRVGGDAQIKAMKKVAGTLKLIYSQY---RELQSFAQFGSDLDADTKARLEQGA 414

Query: 412 IIYDFLKQS 420
            I + LKQS
Sbjct: 415 RIVEVLKQS 423


>gi|221078755|gb|ACL99452.1| ATP synthase beta subunit [Diospyros samoensis]
          Length = 465

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+TIAEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|156530141|gb|ABU75167.1| AtpB [Holacantha emoryi]
          Length = 475

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I  + P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|4995063|emb|CAB43985.1| H(+)-transporting ATP synthase [Apeiba tibourbou]
          Length = 488

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|18077551|emb|CAC88845.1| atpD beta synthase chain [Pseudomonas fluorescens]
          Length = 258

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|155573941|dbj|BAF75536.1| ATP synthase beta subunit [Mallotus japonicus]
          Length = 489

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGQDTVGQEINVTCEVQQLLGNNRVRTVAMNATDGLTRGMEVIDTGTPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D  ++  + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTRAISPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|61968239|gb|AAX57046.1| ATP synthase beta subunit [Flueggea suffruticosa]
          Length = 479

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|4731153|gb|AAD28366.1|AF095732_1 ATP synthase beta subunit [Dillenia retusa]
          Length = 487

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|5758894|gb|AAD50868.1| ATP synthase beta subunit [Liriope muscari]
          Length = 495

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDMGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|5758910|gb|AAD50884.1| ATP synthase beta subunit [Ruscus aculeatus]
          Length = 496

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|57868922|gb|AAW57457.1| ATP synthase beta subunit [Cornus sericea]
          Length = 486

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 47  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 107 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 223

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 224 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 283

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 284 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 341

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 342 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 401

Query: 390 RLIGG 394
             I G
Sbjct: 402 IAILG 406


>gi|229002328|dbj|BAH57927.1| ATP synthase beta subunit [Stuckenia pectinata]
          Length = 491

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 176/366 (48%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQQISVTCEVQQLLGNNRVRAVAMSATDGLTRGMAVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|212896646|gb|ACJ38526.1| membrane-bound ATP synthase subunit B [Desmodium barbatum]
          Length = 467

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|61968307|gb|AAX57080.1| ATP synthase beta subunit [Richeriella gracilis]
          Length = 473

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|7708558|emb|CAB89954.1| ATP synthase beta subunit [Pouteria macrantha]
          Length = 485

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|62902853|gb|AAY19341.1| ATP synthase beta subunit [Casearia javitensis]
          Length = 448

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 68  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 124

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 125 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 184

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 185 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 244

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 245 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 302

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 303 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 362

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 363 KELQDIIAILG 373


>gi|241912856|gb|ACS72106.1| AtpB [Gomphichis crassilabia]
          Length = 489

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119368040|dbj|BAF40533.1| ATP synthase beta subunit [Oxalis corniculata]
          Length = 489

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910882|gb|ABI48173.1| ATPase beta subunit [Orthotrichum sordidum]
          Length = 473

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|52082862|gb|AAU26012.1| ATPase beta subunit [Piper excelsum]
          Length = 469

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|12004143|gb|AAG43911.1|AF213780_1 ATP synthase beta subunit [Jacquinia keyensis]
          Length = 487

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20269426|gb|AAM17940.1| ATP synthase beta subunit [Monotheca buxifolia]
          Length = 448

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 69  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 125

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 126 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 185

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 186 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 245

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 246 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 303

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 304 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 363

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 364 KELQDIIAILG 374


>gi|7708296|emb|CAB90079.1| ATP synthase beta subunit [Ercilla volubilis]
          Length = 490

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|66276277|gb|AAY44153.1| ATP synthase beta subunit [Gurania tubulosa]
          Length = 480

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GTTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|62184078|gb|AAX73350.1| ATP synthase beta subunit [Hakea victoria]
          Length = 497

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085192|gb|AAX63000.1| ATP synthase beta subunit [Ricinus communis]
          Length = 482

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D    LG  D   +  I    P  +        F+TG
Sbjct: 81  GPLSVPVGGATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETG 137

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 138 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 197

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLIL 256
           Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +
Sbjct: 198 YMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFI 257

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 258 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVP 315

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    
Sbjct: 316 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQR 375

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 376 VKQTLQRYKELQDIIAILG 394


>gi|7524904|ref|NP_045906.1| ATP synthase CF1 beta subunit [Chlorella vulgaris]
 gi|416678|sp|P32978|ATPB_CHLVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|391651|dbj|BAA01769.1| ATPase F1 beta subunit ['Chlorella' ellipsoidea]
 gi|2224498|dbj|BAA57982.1| ATP synthase CF1 beta chain [Chlorella vulgaris]
          Length = 481

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+ N LG+P+D    +   D  + I    P  ++       F++GI+V+D+  P 
Sbjct: 94  AATLGRIFNVLGEPVDNLGPVNTKD-QLPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPY 152

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 153 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 212

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AE+F      +VLL +D+I RF  + 
Sbjct: 213 NESNISESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDINKQDVLLFIDNIFRFVQAG 272

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 273 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 330

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R+LA +G YP VDPL S S +       D+  +   ++   + R++E
Sbjct: 331 TTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|212896628|gb|ACJ38517.1| membrane-bound ATP synthase subunit B [Erythrina sousae]
          Length = 470

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINKKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|124361812|gb|ABN09348.1| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 465

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|37721019|gb|AAN32512.1| ATP synthase beta subunit [Maianthemum racemosum]
          Length = 494

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|75328452|sp|Q85V50|ATPB_PSECV RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351885|emb|CAD48094.1| ATP synthase beta subunit [Pseudogaltonia clavata]
          Length = 495

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   E   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTELSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELIYNIAKAHGGVSVFGGVGVRTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20978445|gb|AAC79946.2| ATP synthase beta subunit [Biebersteinia orphanidis]
          Length = 456

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVGQQINVTCEVQQLLGNNRVKAVAMSATDXLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + BVLL +D+I RF  +  E++
Sbjct: 201 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQBVLLFIDNIFRFVQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTXEGSITSIQAVYVPADDLTDPAPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|6688492|emb|CAB65140.1| ATP synthase beta subunit [Justicia americana]
          Length = 498

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 179/370 (48%), Gaps = 31/370 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           +V QG+  D +G+ I +  ++        V    +   E ++ G  V   G    +    
Sbjct: 47  LVVQGR--DTVGEAINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|305663429|ref|YP_003859717.1| H(+)-transporting two-sector ATPase [Ignisphaera aggregans DSM
           17230]
 gi|304377998|gb|ADM27837.1| H(+)-transporting two-sector ATPase [Ignisphaera aggregans DSM
           17230]
          Length = 466

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 153/319 (47%), Gaps = 23/319 (7%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDG 115
            LGQVI ++ DI  +   G    I  G  +        ++  S    GR+ + LG+PIDG
Sbjct: 44  RLGQVIDVSRDITVVQIFGTSSGIMPGKTIIKLQGETLKLGVSIDMLGRIFDGLGRPIDG 103

Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
                 +D L     ++    ++PP+       +  +TGI VID    L  GQ++ +F G
Sbjct: 104 GPPIVPEDYLDIHGAALNPALRIPPS-------EPIETGISVIDGLLTLVRGQKLPIFTG 156

Query: 170 SGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222
           SG+  + +     R            V+   VG    E   F+ +      L +++  +A
Sbjct: 157 SGLPHNRISMQIVRQAAVRGTGESFAVVFGAVGVTYEEAYYFLNELRSMGALDRTIAFIA 216

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
           T+  S + +   P  A+T AE+ + + D +VL IL  +T +  ++REI+    E+P  RG
Sbjct: 217 TASASTVEKLALPRVALTAAEFLAWRYDMHVLTILTDMTNYCEALREISAAREEVPGRRG 276

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G     KG++T +  + +  D+   PI D    I +G IVL+R 
Sbjct: 277 YPGYMYTDLATMYERAGRVTGRKGSMTIMPILTMPDDDITHPIPDLTGYITEGQIVLSRD 336

Query: 342 LAEEGRYPPVDPLASVSRL 360
           +  +G YPPVD   S+SRL
Sbjct: 337 MWRKGVYPPVDVFLSLSRL 355


>gi|212896620|gb|ACJ38513.1| membrane-bound ATP synthase subunit B [Vigna unguiculata]
          Length = 470

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|156622723|dbj|BAF76342.1| ATP synthase beta subunit [Piper kadsura]
          Length = 487

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|124361802|gb|ABN09343.1| ATP synthase beta subunit [Argania spinosa]
          Length = 465

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|257852928|gb|ACV71475.1| ATP synthase beta subunit [Anthodiscus amazonicus]
          Length = 485

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTIGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|212896630|gb|ACJ38518.1| membrane-bound ATP synthase subunit B [Psophocarpus tetragonolobus]
          Length = 466

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|124361814|gb|ABN09349.1| ATP synthase beta subunit [Careya arborea]
          Length = 455

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|116617115|ref|YP_817489.1| ATP synthase CF1 beta subunit [Coffea arabica]
 gi|122153628|sp|A0A342|ATPB_COFAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|116242171|gb|ABJ89686.1| ATP synthase CF1 beta subunit [Coffea arabica]
          Length = 498

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGAVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|33318665|gb|AAQ05216.1| ATP synthase beta subunit [Encephalartos barteri]
          Length = 475

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 175/367 (47%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGQDMAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 91  IFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 147

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESGVINEQ 206

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 207 DISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 266

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 267 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 324

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 325 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 383

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 384 DIIAILG 390


>gi|18075917|emb|CAD11915.1| ATP synthase beta subunit [Desfontainia spinosa]
          Length = 489

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+    G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFXGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718022|gb|AAK72752.1| ATP synthase beta subunit [Cucumis sativus]
          Length = 483

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|7708217|emb|CAB90048.1| ATP synthase beta subunit [Crassula marnierana]
          Length = 490

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVDNLGPVDTG-ITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|66276273|gb|AAY44151.1| ATP synthase beta subunit [Dendrosicyos socotranus]
          Length = 488

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GTTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|323715444|gb|ADY04790.1| ATP synthase beta subunit [Curtisia dentata]
          Length = 474

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|229829740|ref|ZP_04455809.1| hypothetical protein GCWU000342_01837 [Shuttleworthia satelles DSM
           14600]
 gi|229791729|gb|EEP27843.1| hypothetical protein GCWU000342_01837 [Shuttleworthia satelles DSM
           14600]
          Length = 456

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 163/333 (48%), Gaps = 13/333 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GDDSLGKGDLSME 127
           +V +     G  +S   + F      +  S    GRV + +G+ ID G   L +  + + 
Sbjct: 53  LVQLFETATGINLSNSKVRFLGKSLELGVSEDMLGRVFDGMGRTIDDGPQILPEKRMDIN 112

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---- 183
            +   P A  RQ   +  +TG+  ID    L  GQ++ +F+ SG+  + L +  AR    
Sbjct: 113 GLPMNPAA--RQYPSEFIQTGVSSIDGLNTLVRGQKLPIFSASGLPHAQLAAQIARQARV 170

Query: 184 --SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
             +D    V+ + +G    E   F E +     + ++V+ V  +++  + R   P  A+T
Sbjct: 171 RGTDEPFAVVFAAMGITFEEANFFQESFRQTGAIDRTVLFVNLANDPAVERISTPRMALT 230

Query: 241 IAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEY + + D +VL+I+  IT +A ++RE++    E+P  RGYP  ++++L  + ER G 
Sbjct: 231 AAEYLAFEKDMHVLVIMTDITNYADALREVSAARKEVPGRRGYPGYMYTDLATMYERAGR 290

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               KG+IT +  + +  D+   PI D    I +G I+L+R L   G  PPVD + S+SR
Sbjct: 291 LRGHKGSITMIPILSMPEDDKTHPIPDLTGYITEGQIILSRDLYRRGITPPVDVMPSLSR 350

Query: 360 LADKAWSADEKK--LVSSLTHLIHRFEETRDIR 390
           L DK   AD+ +    +++  L   +   +D +
Sbjct: 351 LKDKGIGADKTREDHAATMNQLFAAYARGKDAK 383


>gi|156530143|gb|ABU75168.1| AtpB [Leitneria floridana]
          Length = 487

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKAAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|30351915|emb|CAD48110.1| ATP synthase beta subunit [Periboea paucifolia]
          Length = 493

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|16943747|emb|CAD10761.1| atp synthase, beta subunit [Hanguana malayana]
          Length = 486

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|24940198|emb|CAD43380.1| ATP synthase beta subunit [Lobostemon fruticosus]
          Length = 469

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G     P      GR
Sbjct: 42  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAALSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|21633295|gb|AAM52122.1| ATP synthase beta subunit [Argyreia nervosa]
          Length = 487

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRFAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|7708650|emb|CAB90009.1| ATP synthase beta subunit [Sophora toromiro]
          Length = 479

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|14718046|gb|AAK72764.1| ATP synthase beta subunit [Eucryphia lucida]
          Length = 482

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850942|gb|AAC72163.1| ATP synthase beta subunit [Neorites kevediana]
          Length = 490

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085178|gb|AAX62993.1| ATP synthase beta subunit [Phyllanthus epiphyllanthus]
          Length = 482

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GSTLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|152924|gb|AAA72702.1| ATP synthase beta subunit [Sulfolobus acidocaldarius]
          Length = 465

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 163/322 (50%), Gaps = 20/322 (6%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   GR   +  S    GR+ N LG+P+D    +  G+        + PA  R+  E
Sbjct: 71  GSKVRFLGRGLEVKISEEMLGRIFNPLGEPLDNGPPVIGGEKRNINGDPINPA-TREYPE 129

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196
           +  +TGI  ID    L  G +I   +GSG+  +TL +  A+            V+ + +G
Sbjct: 130 EFIQTGISAIDGLNSLLRGSKITDLSGSGLPANTLAAQIAKQATVRGEESNFAVVFAAIG 189

Query: 197 ERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
            R  E    R+F E+    N  +  + V  +++ P L+ + P TA+T+AEY + + D +V
Sbjct: 190 VRYDEALFFRKFFEETGAIN--RVAMFVTLANDPPSLKILTPKTALTLAEYLAFEKDMHV 247

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L IL  +T +  ++RE++ +  E+P   GYP  ++++L  + ER G    +KG+IT +  
Sbjct: 248 LAILIDMTNYCEALRELSASREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMPI 307

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSAD 368
           + +  D+   PI D    I +G IVL+RSL  +G YPP++ L S+SRL      +  + D
Sbjct: 308 LTMPNDDMTHPIPDLTGYITEGQIVLDRSLFNKGIYPPINVLMSLSRLMKDGIGEGKTRD 367

Query: 369 EKKLVSSLTHLIHRFEETRDIR 390
           + K +S+   L   +   +DIR
Sbjct: 368 DHKDLSN--QLFAAYARAQDIR 387


>gi|114572|sp|P00826|ATPB_TOBAC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11789|emb|CAA43612.1| ATPase subunit beta [Nicotiana tabacum]
 gi|552954|gb|AAA84676.1| ATPase beta subunit [Nicotiana tabacum]
 gi|225208|prf||1211235AN ATPase beta
          Length = 498

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIEVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|219552264|gb|ACL26847.1| ATP synthase beta chain [Flueggea suffruticosa]
 gi|219552270|gb|ACL26850.1| ATP synthase beta chain [Margaritaria indica]
 gi|219552272|gb|ACL26851.1| ATP synthase beta chain [Margaritaria discoidea]
          Length = 423

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|149384395|gb|ABR25020.1| ATP synthase beta chain [Asplenium formosae]
          Length = 426

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 157/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  + + +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSNTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQDISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|61968271|gb|AAX57062.1| ATP synthase beta subunit [Margaritaria discoidea]
 gi|61968273|gb|AAX57063.1| ATP synthase beta subunit [Margaritaria rhomboidalis]
          Length = 479

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|75332478|sp|Q95AF8|ATPB_ASPEL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943662|emb|CAD10757.1| ATP synthase, beta subunit [Aspidistra elatior]
          Length = 498

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21633425|gb|AAM52187.1| ATP synthase beta subunit [Maripa glabra]
          Length = 487

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|16943666|emb|CAD10759.1| ATP synthase, beta subunit [Eriospermum bayeri]
          Length = 493

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+  N   
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMNESG 220

Query: 216 ----------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                     K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|304382805|ref|ZP_07365288.1| ATP synthase F1 sector beta subunit [Prevotella marshii DSM 16973]
 gi|304335990|gb|EFM02237.1| ATP synthase F1 sector beta subunit [Prevotella marshii DSM 16973]
          Length = 508

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 157/334 (47%), Gaps = 49/334 (14%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR++N +G+PIDG  SL      ME    + + PP        K    TGI+VID+  P 
Sbjct: 95  GRMMNVIGQPIDGMASL-----DMEGAYPIHREPPKFEDLSTHKEMLATGIKVIDLLEPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210
             G +IG+F G+G+GK+ L+     +         + + VGER RE  + I D +     
Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVI 209

Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247
             G+  +K++                     +V    +E P  R    L+ +T+AE F  
Sbjct: 210 RYGEAFRKAMDEGKWDLSLVDPEELKQSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269

Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            G       +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  + 
Sbjct: 270 HGGKDGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGTMQERI--TS 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ 
Sbjct: 328 TKRGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387

Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           D      E       +  ++ R++E +DI  I G
Sbjct: 388 DPLIVGKEHYDCAQRVKQILQRYKELQDIIAILG 421


>gi|118917350|dbj|BAF40461.1| ATP synthase beta subunit [Ricinus communis]
          Length = 489

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 158/319 (49%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D    LG  D   +  I    P  +        F+TG
Sbjct: 88  GPLSVPVGGATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETG 144

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 145 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 204

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLIL 256
           Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +
Sbjct: 205 YMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFI 264

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 265 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVP 322

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    
Sbjct: 323 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQR 382

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 383 VKQTLQRYKELQDIIAILG 401


>gi|61968269|gb|AAX57061.1| ATP synthase beta subunit [Margaritaria cyanosperma]
          Length = 479

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|21633435|gb|AAM52192.1| ATP synthase beta subunit [Cordisepalum phalanthopetalum]
          Length = 484

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 157/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D    LG  D +    I    P  +        F+TGI+V D+  
Sbjct: 96  GSTLGRIFNVLGKPVD---HLGPVDTNTTSPIHRSAPAXIQLDTKLSIFETGIKVXDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVXGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEETIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   +
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|21633405|gb|AAM52177.1| ATP synthase beta subunit [Dipteropeltis poranoides]
          Length = 490

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VIDEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|6706141|emb|CAB65901.1| ATP synthase beta subunit [Convolvulus arvensis]
          Length = 490

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|219552268|gb|ACL26849.1| ATP synthase beta chain [Flueggea jullienii]
          Length = 423

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|111283710|gb|ABH09205.1| ATPase beta subunit [Herzogianthus vaginatus]
          Length = 448

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 80  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 137 HRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 196

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 197 INEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R+
Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPPDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|99640649|emb|CAJ45102.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           novaecaledoniae]
          Length = 493

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|61968241|gb|AAX57047.1| ATP synthase beta subunit [Flueggea virosa]
          Length = 479

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|21633349|gb|AAM52149.1| ATP synthase beta subunit [Hildebrandtia valo]
 gi|21633357|gb|AAM52153.1| ATP synthase beta subunit [Sabaudiella aloysii]
          Length = 487

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|212896626|gb|ACJ38516.1| membrane-bound ATP synthase subunit B [Macrotyloma uniflorum]
          Length = 469

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|75336422|sp|Q9MRM0|ATPB_CANWI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687968|emb|CAB89707.1| ATP synthase beta subunit [Canella winterana]
 gi|33327743|gb|AAQ09235.1| ATP synthase beta subunit [Canella winterana]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPADTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20467413|gb|AAL27837.1| ATPase beta subunit [Abies grandis]
          Length = 430

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 165/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 60  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 116

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 117 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 175

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AE+F    + +VLL +D+I RF 
Sbjct: 176 GVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEHFRDVNEQDVLLFIDNIFRFV 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 236 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 293

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   V +R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 294 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQ 352

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 353 RYKELQDIIAI----PGLD 367


>gi|15422204|emb|CAC60244.1| ATP synthase beta subunit [Acicarpha tribuloides]
 gi|15422206|emb|CAC60243.1| ATP synthase subunit beta [Anopterus macleayanus]
 gi|18072462|emb|CAD11921.1| ATP synthase beta subunit [Anopterus glandulosus]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|257852958|gb|ACV71490.1| ATP synthase beta subunit [Elvasia calophyllea]
          Length = 481

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + L+   VL+R L+ +G YPPVDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLNATTVLSRGLSAKGIYPPVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|170178328|gb|ACB10583.1| ATP synthase beta subunit [Cornus oligophlebia]
          Length = 454

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 183 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 360

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 361 ELQDIIAILG 370


>gi|157689158|gb|ABV65135.1| ATP synthase CF1 beta subunit [Heuchera sanguinea]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 161/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 90  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 147 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 206

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 207 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 267 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 324

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 325 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 384

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            ++   +   + R++E +DI  I G
Sbjct: 385 YEIAQRVKQTLQRYKELQDIIAILG 409


>gi|118917382|dbj|BAF40491.1| ATP synthase beta subunit [Mascagnia rivularis]
          Length = 488

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|61968299|gb|AAX57076.1| ATP synthase beta subunit [Poranthera microphylla]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|21633409|gb|AAM52179.1| ATP synthase beta subunit [Jacquemontia pentanthos]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 25/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTKITSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 218 GVINEEKIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 275

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 276 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 333

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DP   +  + LD   VL+R LA +G YP VDPL S S +        E    +     + 
Sbjct: 334 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQLQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|55056904|emb|CAF21953.1| ATP synthase beta subunit [Picea spinulosa]
          Length = 474

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 160/318 (50%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRSAPAFTELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 339 PATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 397

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI  I    PG+D
Sbjct: 398 YKELQDIIAI----PGLD 411


>gi|213495617|gb|ACJ49078.1| AtpB [Acacia schweinfurthii]
          Length = 428

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 60  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 116

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 117 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 176

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 177 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 236

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 237 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 294

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 295 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 354

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 355 KELQDIIAILG 365


>gi|242910135|ref|YP_002970651.1| ATP synthase CF1 subunit beta [Alsophila spinulosa]
 gi|99640386|emb|CAJ45067.1| putative beta subunit of chloroplast ATP synthase [Cyathea
           australis]
 gi|218454804|gb|ACK77141.1| ATP synthase CF1 subunit beta [Alsophila spinulosa]
          Length = 493

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|21633355|gb|AAM52152.1| ATP synthase beta subunit [Hildebrandtia africana]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTKTTSXIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRXGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|75330484|sp|Q8MBM4|ATPB_CALSE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633325|gb|AAM52137.1| ATP synthase beta subunit [Calystegia sepium]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633423|gb|AAM52186.1| ATP synthase beta subunit [Dicranostyles mildbraediana]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 158/315 (50%), Gaps = 20/315 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVI 152
           ++      GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+
Sbjct: 93  VAVGGATLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTRLSIFETGIKVV 149

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+  
Sbjct: 150 DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEM 209

Query: 212 --------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
                   +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I 
Sbjct: 210 KESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIF 269

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 270 RFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDL 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   
Sbjct: 328 TDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQT 387

Query: 380 IHRFEETRDIRLIGG 394
           + R++E +DI  I G
Sbjct: 388 LQRYKELQDIIAILG 402


>gi|21633461|gb|AAM52205.1| ATP synthase beta subunit [Schizanthus pinnatus]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|123325603|gb|ABM74426.1| ATP synthase beta subunit [Citrus aurantium]
          Length = 466

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLXIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|156530163|gb|ABU75178.1| AtpB [Picrolemma sprucei]
          Length = 496

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA+ +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPALIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|111283714|gb|ABH09207.1| ATPase beta subunit [Lepidolaena taylorii]
          Length = 449

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 60  ATLGRIFNVLGEPVDELGPVEAGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 118

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 119 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 178

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 179 EQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 238

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 239 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 296

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 297 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 355

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 356 LQDIIAILG 364


>gi|119367974|dbj|BAF40457.1| ATP synthase beta subunit [Mercurialis leiocarpa]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|99640634|emb|CAJ45099.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           auriculifera]
          Length = 493

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|37545708|gb|AAM97786.1| ATP synthase beta subunit [Tricoryne sp. Chase 2220]
          Length = 467

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGSVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|7708514|emb|CAB89945.1| ATP synthase beta subunit [Napoleona vogelii]
          Length = 481

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|24940188|emb|CAD43376.1| ATP synthase beta subunit [Hydrophyllum canadense]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708179|emb|CAB90006.1| ATP synthase beta subunit [Buddleja auriculata]
          Length = 457

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTXPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 208 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAPRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|88658665|ref|YP_507384.1| F0F1 ATP synthase subunit beta [Ehrlichia chaffeensis str.
           Arkansas]
 gi|118573532|sp|Q2GGP9|ATPB_EHRCR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|88600122|gb|ABD45591.1| ATP synthase F1, beta subunit [Ehrlichia chaffeensis str. Arkansas]
          Length = 507

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 148/280 (52%), Gaps = 19/280 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GRV + LG  ID    L +    + +I S++P   +++   +   TGI+VID+  P   
Sbjct: 116 LGRVFDVLGNTIDECGPLEESSYFIKQIYSEIPKLTDQKIATEILVTGIKVIDLLAPYLK 175

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE----DY 209
           G ++G+F G+G+GK+ L+     +       +S+   VGER RE      E IE    + 
Sbjct: 176 GGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVINL 235

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
              +  ++V+V    +E P  R    L+A+T+AEYF  ++  +VL  +D+I RF  S  E
Sbjct: 236 ENKDQSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDAENQDVLFFVDNIFRFTQSGSE 295

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+   G +P A GY  ++ +E+  + ERI  +    G+IT+V ++ V  D+  DP   + 
Sbjct: 296 ISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNSGSITSVQAIYVPADDLTDPAPATS 353

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + LD   VL+R ++E G YP VDPL S S+    A SAD
Sbjct: 354 FAHLDSTTVLSRQISELGIYPAVDPLDSTSQ----ALSAD 389


>gi|66276275|gb|AAY44152.1| ATP synthase beta subunit [Ecballium elaterium]
          Length = 478

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 86  ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 143 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 202

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 203 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 262

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 263 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 320

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 321 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 380

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 381 ELQDIIAILG 390


>gi|62085169|gb|AAX62989.1| ATP synthase beta subunit [Omphalea diandra]
          Length = 482

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDIRATSPIHRSAPAFIQLGTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|37729418|gb|AAN71675.1| ATP synthase beta subunit [Fagus grandifolia]
          Length = 472

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIXGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|323715452|gb|ADY04794.1| ATP synthase beta subunit [Hydrostachys insignis]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 159/317 (50%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150
            ++       GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+
Sbjct: 90  LKVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIK 146

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 147 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 206

Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 207 EMKESGVINENNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 266

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D
Sbjct: 267 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 324

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 325 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 384

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 385 ETLQRYKELQDIIAILG 401


>gi|212896642|gb|ACJ38524.1| membrane-bound ATP synthase subunit B [Campylotropis macrocarpa]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|212896618|gb|ACJ38512.1| membrane-bound ATP synthase subunit B [Dumasia villosa]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 88  ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 145 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 204

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 205 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 265 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 323 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 382

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 383 ELQDIIAILG 392


>gi|37545704|gb|AAM97784.1| ATP synthase beta subunit [Pasithea coerulea]
          Length = 421

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 44  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 100

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 101 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 160

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 161 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 220

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 221 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 278

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 279 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 337

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 338 YKELQDIIAILG 349


>gi|7708538|emb|CAB89952.1| ATP synthase beta subunit [Phytolacca dioica]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633361|gb|AAM52155.1| ATP synthase beta subunit [Seddera hirsuta]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|7708622|emb|CAB89979.1| ATP synthase beta subunit [Rourea minor]
          Length = 471

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + +  PA      +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFXXLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|4206582|gb|AAD11722.1| ATP synthase beta subunit [Casimiroa edulis]
          Length = 474

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +M  + K  PA  +       F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTMSPIHKSAPAFIQLDTSLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|3850944|gb|AAC72164.1| ATP synthase beta subunit [Orites lancifolia]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|60117188|ref|YP_209522.1| ATP synthase CF1 beta subunit [Huperzia lucidula]
 gi|75321504|sp|Q5SCV8|ATPB_HUPLU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50659996|gb|AAT80718.1| ATP synthase CF1 beta subunit [Huperzia lucidula]
          Length = 492

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D   S+  G  S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 103 ATLGRIFNVLGEPVDNLGSVDAGTTSP--IHRSAPAFAQSDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVI 220

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 221 NEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNILRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDP  S   +  + W   E+  +    +   + R++
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPSDSTPTML-QPWIVGEQHYETAQEVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|55056900|emb|CAF21951.1| ATP synthase beta subunit [Abies alba]
          Length = 473

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 165/319 (51%), Gaps = 28/319 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDASTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    ++ P  R    LTA+T+AE+F    + +VLL +D+I RF 
Sbjct: 220 GVINEQKISESKVALVYGQMNDPPGARMRVGLTALTMAEHFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   V +R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 338 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQ 396

Query: 382 RFEETRDIRLIGGYRPGVD 400
           R++E +DI  I    PG+D
Sbjct: 397 RYKELQDIIAI----PGLD 411


>gi|212896650|gb|ACJ38528.1| membrane-bound ATP synthase subunit B [Mucuna sp. Doyle et al.
           s.n.]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|123325683|gb|ABM74466.1| ATP synthase beta subunit [Merrillia caloxylon]
          Length = 466

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|4995856|emb|CAB44275.1| H(+)-transporting ATP synthase [Sparrmannia ricinocarpa]
          Length = 480

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|14718169|gb|AAK72823.1| ATP synthase beta subunit [Pereskia aculeata]
          Length = 473

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGXVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|5758911|gb|AAD50885.1| ATP synthase beta subunit [Sansevieria socotrana]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 107 LGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 223

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 224 EKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRYKEL 401

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 402 QDIIAILG 409


>gi|184127847|gb|ACC67823.1| ATP synthase beta chain [Marattia laevis]
          Length = 399

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 12  LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 69

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 70  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 129

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 130 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 189

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 190 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 247

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 248 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 306

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 307 QDIIAILG 314


>gi|149384427|gb|ABR25036.1| ATP synthase beta chain [Asplenium tenerum]
          Length = 426

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 157/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  + + +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSNTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQDISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|30351917|emb|CAD48469.1| ATP synthase beta subunit [Polyxena ensifolia]
          Length = 456

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|7708644|emb|CAB89999.1| ATP synthase beta subunit [Sedum nudum]
          Length = 457

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 74  GVTLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 132

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 133 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 192

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 193 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 252

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 253 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 310

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 311 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 370

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 371 LQDIIAILG 379


>gi|7708512|emb|CAB89963.1| ATP synthase beta subunit [Planchonella pohlmaniana]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718090|gb|AAK72785.1| ATP synthase beta subunit [Ixonanthes icosandra]
          Length = 475

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|7708173|emb|CAB90023.1| ATP synthase beta subunit [Bougainvillea glabra]
          Length = 448

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 70  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 126

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 127 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 186

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 187 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 246

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 364

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 365 KELQDIIAILG 375


>gi|212896616|gb|ACJ38511.1| membrane-bound ATP synthase subunit B [Cologania lemmonii]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|195183541|dbj|BAG66982.1| ATP synthase beta subunit [Rinorea subintegrifolia]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + +  PA  +   E   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTELSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYGTAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917416|dbj|BAF40523.1| ATP synthase beta subunit [Flacourtia indica]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTQTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917402|dbj|BAF40509.1| ATP synthase beta subunit [Flueggea virosa]
          Length = 481

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|115605029|ref|YP_784480.1| ATP synthase CF1 beta subunit [Piper cenocladum]
 gi|122164355|sp|Q06GQ3|ATPB_PIPCE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112253758|gb|ABI14479.1| ATP synthase CF1 beta subunit [Piper cenocladum]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|99640508|emb|CAJ45089.1| putative beta subunit of chloroplast ATP synthase [Dicksonia
           arborescens]
 gi|99640513|emb|CAJ45090.1| putative beta subunit of chloroplast ATP synthase [Dicksonia
           fibrosa]
 gi|99640575|emb|CAJ45091.1| putative beta subunit of chloroplast ATP synthase [Dicksonia
           gigantea]
 gi|99640579|emb|CAJ45092.1| putative beta subunit of chloroplast ATP synthase [Dicksonia
           lanata]
 gi|99640586|emb|CAJ45093.1| putative beta subunit of chloroplast ATP synthase [Dicksonia
           squarrosa]
 gi|99640592|emb|CAJ45094.1| putative beta subunit of chloroplast ATP synthase [Dicksonia
           thyrsopteroides]
          Length = 493

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|6017822|gb|AAF01645.1| ATP synthase beta subunit [Phytolacca americana]
          Length = 494

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TG
Sbjct: 92  GPLSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETG 148

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 149 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 208

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLIL 256
           Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +
Sbjct: 209 YMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFI 268

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 269 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVP 326

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +    LD   VL+R LA +G YP VDPL S S +       +E  +    
Sbjct: 327 ADDLTDPAPATTFGHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQR 386

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 387 VKQTLQRYKELQDIIAILG 405


>gi|212896656|gb|ACJ38531.1| membrane-bound ATP synthase subunit B [Hardenbergia violacea]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|155029297|dbj|BAF75529.1| ATP synthase beta subunit [Discoglypremna caloneura]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|89242550|gb|ABD64633.1| ATPase beta subunit [Hydrocharis morsus-ranae]
          Length = 436

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTLGQQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 63  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 119

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 120 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 179

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 180 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 239

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 240 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R++E +DI
Sbjct: 298 HLDATTVLSRGLAAKGIYPAVDPLESTSTMLQPRIVGEEHYEIAQRVKQTSQRYKELQDI 357

Query: 390 RLIGG 394
             I G
Sbjct: 358 IAILG 362


>gi|119350475|gb|ABL63188.1| AtpB [Chlorella vulgaris]
          Length = 391

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 156/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GR+ N LG+P+D    +   D  + I    P  ++       F++GI+V+D+  P 
Sbjct: 34  AATLGRIFNVLGEPVDNLGPVNTKD-QLPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPY 92

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 93  RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 152

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AE+F      +VLL +D+I RF  + 
Sbjct: 153 NESNISESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDINKQDVLLFIDNIFRFVQAG 212

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 213 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 270

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R+LA +G YP VDPL S S +       D+  +   ++   + R++E
Sbjct: 271 TTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKE 330

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 331 LQDIIAILG 339


>gi|16943745|emb|CAD10760.1| atp synthase, beta subunit [Polygonatum hookeri]
          Length = 492

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|16943741|emb|CAD10754.1| ATP synthase, beta subunit [Kniphofia uvaria]
          Length = 495

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G   I P      GR
Sbjct: 50  KGRDIVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLIVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   ++G  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NIGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|212896612|gb|ACJ38509.1| membrane-bound ATP synthase subunit B [Pseudovigna argentea]
 gi|212896614|gb|ACJ38510.1| membrane-bound ATP synthase subunit B [Pueraria phaseoloides]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|118917420|dbj|BAF40526.1| ATP synthase beta subunit [Lunania parviflora]
 gi|118917422|dbj|BAF40527.1| ATP synthase beta subunit [Scolopia spinosa]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|99640421|emb|CAJ45074.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           ramispina]
          Length = 493

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|7708333|emb|CAB90092.1| ATP synthase beta subunit [Humiria balsamifera]
          Length = 475

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|21633399|gb|AAM52174.1| ATP synthase beta subunit [Itzaea sericea]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633429|gb|AAM52189.1| ATP synthase beta subunit [Maripa paniculata]
          Length = 478

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTNTTSAIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATXFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|308026072|emb|CBK33636.1| ATP synthetase beta subunit [Petenaea cordata]
          Length = 476

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|306773442|emb|CBJ55297.1| putative beta subunit of chloroplast ATP synthase [Cyathea senilis]
          Length = 383

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|254419530|ref|ZP_05033254.1| ATP synthase F1, beta subunit [Brevundimonas sp. BAL3]
 gi|196185707|gb|EDX80683.1| ATP synthase F1, beta subunit [Brevundimonas sp. BAL3]
          Length = 511

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 23/311 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PID    + +      I  + P    +    +   TGI+VID+  P   G 
Sbjct: 120 GRIMNVVGQPIDEAGPI-QTTQYRPIHREAPTFEEQTNSSEILVTGIKVIDLICPYTKGG 178

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK--- 215
           + G+F G+G+GK+     L++  A++     V+   VGER RE  +   + +  N+    
Sbjct: 179 KTGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHEMIESNVNVDP 237

Query: 216 ----------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264
                     K  +V    +E P  R    LT +  AEYF   +G +VLL +D+I RF  
Sbjct: 238 AKNGGSTEGSKCALVYGQMNEPPGARARVALTGLAQAEYFRDEEGKDVLLFVDNIFRFTQ 297

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V  D+  DP 
Sbjct: 298 AGSEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTKKGSITSVQAIYVPADDPTDPA 355

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383
             +  + LD   +L+R +A +  +P VDPL S SR+ D     +E   V+ S+  ++ ++
Sbjct: 356 PAASFAHLDATTMLSRDIAAQAIFPAVDPLDSTSRIMDPLVIGEEHYNVARSVQEVLQQY 415

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 416 KGLKDIIAILG 426


>gi|195183486|dbj|BAG66958.1| ATP synthase beta subunit [Fusispermum laxiflorum]
 gi|195183489|dbj|BAG66959.1| ATP synthase beta subunit [Fusispermum minutiflorum]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917376|dbj|BAF40487.1| ATP synthase beta subunit [Bunchosia hookeriana]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMQVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|118917388|dbj|BAF40496.1| ATP synthase beta subunit [Diporidium greveanum]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6687447|emb|CAB64950.1| ATP synthase beta subunit [Donatia sp. Morgan 2142]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708460|emb|CAB90104.1| ATP synthase beta subunit [Kedrostis nana]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GTTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPSFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|7708159|emb|CAB90027.1| ATP synthase beta subunit [Balanites maughamii]
          Length = 487

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 156/313 (49%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 102 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 217

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
              E  L ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 218 VINEKKLAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 275

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  D
Sbjct: 276 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTD 333

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 334 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|62085156|gb|AAX62983.1| ATP synthase beta subunit [Leonia glycycarpa]
          Length = 434

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 46  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 102

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 103 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 162

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 163 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 222

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 223 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 280

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 281 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 340

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 341 KELQDIIAILG 351


>gi|62085159|gb|AAX62984.1| ATP synthase beta subunit [Lunania sp. Alford 69]
          Length = 486

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|57868944|gb|AAW57468.1| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 493

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|195468864|dbj|BAG66966.1| ATP synthase beta subunit [Hybanthus enneaspermus]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6689111|emb|CAB65391.1| ATP synthase beta subunit [Rhynchoglossum notonianum]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  + S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVETSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|19033077|gb|AAL83523.1|AF408795_1 ATP synthase beta subunit [Cosmocladium perissum]
          Length = 402

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D    +G  +++    + +  PA  +   +   F+TG
Sbjct: 29  GPLSVPVGEVTLGRIFNVLGEPVD---EMGPVNVTATSPIHRSAPAFTQLDTKLSIFETG 85

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 86  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 145

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
           Y+          +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +
Sbjct: 146 YMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 205

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 206 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKEGSITSIQAVYVP 263

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVS 374
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   A+      
Sbjct: 264 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQ 322

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 323 GVKKTLQRYKELQDIIAILG 342


>gi|4995850|emb|CAB44293.1| H(+)-transporting ATP synthase [Triplochiton zambesiacus]
          Length = 440

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 50  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 106

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 107 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 166

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 167 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 226

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 227 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXEGSITSIQAVYVPADDLTDPA 284

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 285 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEXYETAQRVKQTLQRY 344

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 345 KELQDIIAILG 355


>gi|66276279|gb|AAY44154.1| ATP synthase beta subunit [Gynostemma pentaphyllum]
          Length = 488

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|332105875|gb|AEE01400.1| ATP synthase beta chain [Guazuma crinita]
          Length = 493

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|212896640|gb|ACJ38523.1| membrane-bound ATP synthase subunit B [Kummerowia stipulacea]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|212896608|gb|ACJ38507.1| membrane-bound ATP synthase subunit B [Pachyrhizus erosus]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|183206516|gb|ACC54456.1| ATP synthase beta subunit [Phyteuma spicatum]
          Length = 480

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 172/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDMGTPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 92  IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 207

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +     +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 268 SALLXRIPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTF 325

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +  YP VDPL S S +      +DE  K   S+   + R++E +D
Sbjct: 326 AHLDATTVLSRGLAAKXIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQD 385

Query: 389 IRLIGG 394
           I  I G
Sbjct: 386 IITILG 391


>gi|123325649|gb|ABM74449.1| ATP synthase beta subunit [Citrus reticulata]
          Length = 466

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSSSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|138752431|emb|CAM09324.1| ATP synthetase beta subunit [Metteniusa tessmanniana]
          Length = 482

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|52082868|gb|AAU26015.1| ATPase beta subunit [Piper arborescens]
          Length = 468

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|6687278|emb|CAB64899.1| ATP synthase beta subunit [Cephalanthus occidentalis]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21264381|sp|O03085|ATPB_VANDA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|14424440|gb|AAB51736.3| ATP synthase beta chain [Vandenboschia davallioides]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            G + N LG P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 91  LGXIFNVLGDPVD---NLGPVDTSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 148 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 207

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 208 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 267

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 268 EVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 325

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 326 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 384

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 385 LQDIIAILG 393


>gi|21264377|sp|O03067|ATPB_DICAN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|6724293|gb|AAB51737.2| ATP synthase beta chain [Dicksonia antarctica]
          Length = 476

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 89  GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 145

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 146 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 205

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 206 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 265

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 266 VSALSGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 323

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 324 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 382

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 383 QDIIAI----PGLD 392


>gi|229002282|dbj|BAH57918.1| ATP synthase beta subunit [Potamogeton crispus]
          Length = 491

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + R
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQRVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|118917334|dbj|BAF40451.1| ATP synthase beta subunit [Clutia augustifolia]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917390|dbj|BAF40497.1| ATP synthase beta subunit [Gomphia serrata]
 gi|119368008|dbj|BAF40498.1| ATP synthase beta subunit [Ochna serrulata]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14587183|gb|AAK70492.1| ATP synthase beta subunit [Hanguana malayana]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|19033065|gb|AAL83517.1|AF408789_1 ATP synthase beta subunit [Coleochaete soluta]
          Length = 402

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVDCTVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +       +   + R++E
Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYDTAQGVKQTLQRYKE 333

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 334 LQDIIAILG 342


>gi|7708337|emb|CAB89905.1| ATP synthase beta subunit [Hydrophyllum canadense]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PXTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|62085151|gb|AAX62981.1| ATP synthase beta subunit [Kiggelaria sp. Alford 51]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085124|gb|AAX62968.1| ATP synthase beta subunit [Dovyalis rhamnoides]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|81301573|ref|YP_398870.1| ATP synthase CF1 beta subunit [Nicotiana tomentosiformis]
 gi|118573705|sp|Q33C27|ATPB_NICTO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|80750932|dbj|BAE48008.1| ATPase beta subunit [Nicotiana tomentosiformis]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|257853482|gb|ACV71743.1| ATP synthase beta subunit [Bergia texana]
          Length = 486

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|242624355|ref|YP_003002273.1| ATP synthase CF1 beta chain [Aureoumbra lagunensis]
 gi|239997463|gb|ACS36985.1| ATP synthase CF1 beta chain [Aureoumbra lagunensis]
          Length = 475

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D    +G  D S  + I    P   + +     F+TGI+V+D+  P   
Sbjct: 92  GRIFNILGEPVD---EMGDVDASETLPIHRSAPAFTDLETKPSVFETGIKVVDLLAPYRR 148

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 149 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE 208

Query: 212 DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +NL  S V +     +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 209 NNLSDSKVALCYGQMNEPPGARMRIGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 268

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   + 
Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPATT 326

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S  L  +   A+       +   + +++E +
Sbjct: 327 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPEIVGAEHYGTAQKVKETLQKYKELQ 386

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 387 DIIAILG 393


>gi|195183479|dbj|BAG66955.1| ATP synthase beta subunit [Anchietea selloviana]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTLGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---ELGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEA 217

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 218 NFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEEHYETAQKVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|89242538|gb|ABD64627.1| ATPase beta subunit [Cercis canadensis]
          Length = 436

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|119368184|dbj|BAF40433.1| ATP synthase beta subunit [Kiggelaria africana]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917362|dbj|BAF40469.1| ATP synthase beta subunit [Jatropha integerrima]
          Length = 486

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708256|emb|CAB90052.1| ATP synthase beta subunit [Cinchona pubescens]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|4206588|gb|AAD11725.1| ATP synthase beta subunit [Atalantia ceylanica]
          Length = 472

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYESAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|3850914|gb|AAC72149.1| ATP synthase beta subunit [Stirlingia latifolia]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|5758901|gb|AAD50875.1| ATP synthase beta subunit [Orchidantha fimbriata]
          Length = 496

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +      + F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIELDTKLEIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDNL 214
              G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++     +
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNVGKAHGGVSVFGGVGERTREGNDLYKEMKESGV 221

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       ++  ++   +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEKHYEIAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIITILG 409


>gi|257853460|gb|ACV71732.1| ATP synthase beta subunit [Dianella intermedia]
 gi|257853462|gb|ACV71733.1| ATP synthase beta subunit [Dianella montana]
 gi|257853464|gb|ACV71734.1| ATP synthase beta subunit [Dianella revoluta]
 gi|257853466|gb|ACV71735.1| ATP synthase beta subunit [Dianella sandwicensis]
 gi|257853468|gb|ACV71736.1| ATP synthase beta subunit [Dianella tasmanica]
 gi|257853470|gb|ACV71737.1| ATP synthase beta subunit [Eccremis coarctata]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 382

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 383 YKELQDIIAILG 394


>gi|164566077|gb|ABY61181.1| ATP synthase beta subunit [Danaea geniculata]
          Length = 394

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|61968275|gb|AAX57064.1| ATP synthase beta subunit [Martretia quadricornis]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|14717962|gb|AAK72723.1| ATP synthase beta subunit [Begonia metallica x Begonia sanguinea]
          Length = 475

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|7708215|emb|CAB90045.1| ATP synthase beta subunit [Corynocarpus laevigata]
          Length = 487

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|7708308|emb|CAB90082.1| ATP synthase beta subunit [Garrya elliptica]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 96  GSTLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|15425566|emb|CAC60322.1| ATP synthase beta subunit [Cuttsia viburnea]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 212

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF 
Sbjct: 213 GVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 272

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V   +  DP
Sbjct: 273 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPAADLTDP 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R
Sbjct: 331 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQR 390

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 391 YKELQDIIAILG 402


>gi|21633341|gb|AAM52145.1| ATP synthase beta subunit [Aniseia argentina]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHISAPAFIQLDTKLAIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+G + L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGNTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENMAQSTVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|158518590|sp|Q4VZI5|ATPB_CUCSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|74027108|gb|AAZ94658.1| ATPase beta subunit [Cucumis sativus]
 gi|115432811|gb|ABI97424.1| ATP synthase CF1 beta subunit [Cucumis sativus]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62902802|gb|AAY19316.1| ATP synthase beta subunit [Bhesa paniculata]
 gi|62902804|gb|AAY19317.1| ATP synthase beta subunit [Bhesa robusta]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|313207189|ref|YP_004046366.1| ATP synthase f1, beta subunit [Riemerella anatipestifer DSM 15868]
 gi|312446505|gb|ADQ82860.1| ATP synthase F1, beta subunit [Riemerella anatipestifer DSM 15868]
 gi|315022409|gb|EFT35436.1| F0F1 ATP synthase subunit beta [Riemerella anatipestifer RA-YM]
 gi|325335371|gb|ADZ11645.1| F0F1-type ATP synthase, beta subunit [Riemerella anatipestifer
           RA-GD]
          Length = 502

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 40/329 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G  IDG   L K +  + I  + P         +   TGI+VID+  P   G 
Sbjct: 91  GRLFNVVGDAIDGLQDLSK-EGGLPIHREAPKFDQLSTSAEVLYTGIKVIDLIEPYAKGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   GD
Sbjct: 150 KIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYGD 209

Query: 213 NL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-----S 246
           +                       K+  V    +E P  R    L+ +T+AEY+     +
Sbjct: 210 DFMHSMEEGGWDLSKVDTELMKESKAAFVFGQMNEPPGARARVALSGLTLAEYYRDGGET 269

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + G+
Sbjct: 270 GQGRDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKNGS 327

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           IT+V +V V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR LA +  
Sbjct: 328 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLDSTSRILAPEII 387

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
             +       +  ++ R++  +DI  I G
Sbjct: 388 GEEHYNCAQRVKEILQRYKALQDIIAILG 416


>gi|260889247|ref|ZP_05900510.1| V-type sodium ATPase, B subunit [Leptotrichia hofstadii F0254]
 gi|260860658|gb|EEX75158.1| V-type sodium ATPase, B subunit [Leptotrichia hofstadii F0254]
          Length = 459

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD-LVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           G+V+ +N D   +        I+L D  V   GR   +  S    GRV + LG+P D   
Sbjct: 42  GRVLEVNGDKAVVQLFENSAGINLKDSKVRFLGRPLSLGVSEDMIGRVFDGLGRPKDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   + +++I       + R    +  +TG+  ID    L  GQ++ +F+GSG+  + L
Sbjct: 102 KIIP-EKTLDINGTAINPVARDYPSEFIQTGVSAIDGLNTLVRGQKLPIFSGSGLPHAEL 160

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
               AR      +D    V+   +G    E + F ED++    + ++V+ +  +D+  I 
Sbjct: 161 ALQIARQAKVLGTDSKFAVVFGAIGITFEEAQTFTEDFVKTGAIDRAVLFMNLADDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +  ++RE++    E+P  RGYP  ++++
Sbjct: 221 RLSTPKMALTCAEYLAFEKGMHVLVILTDLTNYCEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  + ER G  +  +G+IT +  + +  D+   PI D    I +G I+L+R L ++   P
Sbjct: 281 LSTIYERAGRIKGREGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKQNLMP 340

Query: 350 PVDPLASVSRLADKA 364
           P++ L S+SRL DK 
Sbjct: 341 PINVLPSLSRLKDKG 355


>gi|164566081|gb|ABY61183.1| ATP synthase beta subunit [Danaea geniculata]
          Length = 394

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|124361806|gb|ABN09345.1| ATP synthase beta subunit [Manilkara zapota]
          Length = 465

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|118917424|dbj|BAF40528.1| ATP synthase beta subunit [Xylosma congesta]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTQTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917346|dbj|BAF40459.1| ATP synthase beta subunit [Pera heteranthera]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|61968277|gb|AAX57065.1| ATP synthase beta subunit [Meineckia phyllanthoides]
 gi|61968329|gb|AAX57091.1| ATP synthase beta subunit [Zimmermanniopsis uzungwaensis]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|21684873|emb|CAD11563.1| ATP synthase beta subunit [Centrolepis strigosa]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 157/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  ++       F+TGI+V+D+  P
Sbjct: 99  ATLGRIFNVLGEPVD---NLGPVDTSAMSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 155

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 156 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYIEMKESG 214

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E  L ++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 215 VINEKDLAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  +K +IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + 
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYEIAQRVKQTLQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|21633453|gb|AAM52201.1| ATP synthase beta subunit [Cuscuta sp. RGO 90-12]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D    LG  ++  M  + +  PA  +       F+TG
Sbjct: 88  GPISVPVGGSTLGRIFNVLGEPVD---QLGPVEIHKMSPIHRSAPAFIKLDTRLSIFETG 144

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE---- 201
           I+V+D+  P   G ++G+F G+G+GK+ L+     +         +   VGER RE    
Sbjct: 145 IKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDL 204

Query: 202 VREFIEDYLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
             E  E  + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +
Sbjct: 205 YMEMKESGVINQQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFI 264

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 265 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVP 322

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375
            D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +       +   K    
Sbjct: 323 ADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGEHHYKTAQR 382

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 383 VKQTLQRYKELQDIIAILG 401


>gi|6689365|emb|CAB65457.1| ATP synthase beta subunit [Schizanthus pinnatus]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|58081502|gb|AAW65226.1| AtpB [Conocephalum conicum]
          Length = 390

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 163/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 3   LGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 59

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 60  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNGLYMEMKESKVI 118

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 119 NEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 178

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 179 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 236

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 237 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 295

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 296 ELQDIIAILG 305


>gi|62085122|gb|AAX62967.1| ATP synthase beta subunit [Dalechampia spathulata]
          Length = 482

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTCATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|195183477|dbj|BAG66954.1| ATP synthase beta subunit [Anchietea salutaris]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTLGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---ELGPLDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEA 217

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 218 NFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEEHYETAQKVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|148787941|gb|ABR12220.1| ATP synthase beta subunit [Eichhornia crassipes]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDMGAPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 91  IFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 147

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 207

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 208 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 267

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 268 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 326 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 385

Query: 390 RLIGG 394
             I G
Sbjct: 386 IAILG 390


>gi|61968209|gb|AAX57031.1| ATP synthase beta subunit [Apodiscus chevalieri]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|7708572|emb|CAB89974.1| ATP synthase beta subunit [Rhabdodendron amazonicum]
          Length = 487

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|14718269|gb|AAK72872.1| ATP synthase beta subunit [Zelkova serrata]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINXIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 208

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 209 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 268

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E+    G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 269 QAGSEVPALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 326

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 327 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 386

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 387 YKELQDIIAILG 398


>gi|6687660|emb|CAB65033.1| ATP synthase beta subunit [Guettarda uruguensis]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|257852964|gb|ACV71493.1| ATP synthase beta subunit [Sauvagesia erecta]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110348959|gb|ABG73051.1| ATP synthase beta chain [Marsilea gibba]
          Length = 395

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|119368182|dbj|BAF40431.1| ATP synthase beta subunit [Ceratiosicyos laevis]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917368|dbj|BAF40479.1| ATP synthase beta subunit [Humiria balsamifera var. balsamifera]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|99640654|emb|CAJ45103.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           tomentosissima]
          Length = 493

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|95117620|gb|ABF57014.1| ATP synthase beta chain [Amphidinium carterae]
          Length = 548

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 144/270 (53%), Gaps = 22/270 (8%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
           F+TGI+V+D+ TP   G ++G+F G+G+GK+ L+    R+  +    +SL   +GER RE
Sbjct: 208 FETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRNLAYSHNGLSLFSGIGERSRE 267

Query: 202 VREFIEDYLGDNL---------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             +   +     +                K  +V    +++P  R      A+T+AEYF 
Sbjct: 268 ANDLYVEMQESGIILLAEDSSNPYFSAESKVALVFGQMNDTPGARFRVANAALTMAEYFR 327

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G ++L+ +D+I RF  +  E++T  G +P A GY  ++ +E+  L ERI P+    G
Sbjct: 328 DVNGQDLLVFMDNIFRFVQAGSELSTLLGRMPSAVGYQPTLATEMGTLQERIVPT--LFG 385

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   ++ + LD   VL+  LA +G YP VDPLAS S+    ++
Sbjct: 386 SITSIQAVYVPADDITDPAPVAIFTHLDAITVLSCGLAAKGIYPAVDPLASTSKALTPSF 445

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             ++   +  S+   ++R++E +D+  I G
Sbjct: 446 VGEKHYNVAQSIIQCLNRYKELQDLIAILG 475


>gi|46360651|gb|AAS89107.1| ATP synthase beta subunit [Austrofossombronia australis]
          Length = 379

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 157/306 (51%), Gaps = 20/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           ++ N LG+P+D    +G  D +  I    P           F+TGI+V+D+  P   G +
Sbjct: 1   KIFNVLGEPVDNLGPVGS-DTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGK 59

Query: 164 IGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--N 213
           IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N
Sbjct: 60  IGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQN 118

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 119 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 178

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 179 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 236

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 237 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKRTLQRYKELQD 295

Query: 389 IRLIGG 394
           I  I G
Sbjct: 296 IIAILG 301


>gi|332828941|gb|EGK01624.1| ATP synthase subunit beta [Dysgonomonas gadei ATCC BAA-286]
          Length = 504

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 164/331 (49%), Gaps = 45/331 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           GR++N +G  IDG  +L K + +   + + PP     Q   +   TGI+V+D+  P   G
Sbjct: 93  GRLMNVVGDAIDGMSTLDKANGNP--IHREPPKFEELQTTREVLFTGIKVVDLLAPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL-- 210
            ++G+F G+G+GK+ L+     ++  + + +   + + VGER RE    +RE IE  +  
Sbjct: 151 GKVGLFGGAGVGKTVLIMELINNIAKKHNGYS--VFAGVGERTREGNDLLREMIESKVVR 208

Query: 211 -GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-SS 247
            G+  +KS+                     +V    +E P  R    L+ +TIAE F  +
Sbjct: 209 YGEEFEKSMEEGHWDLSKVDPKELEKSQISLVFGQMNEPPGARADVALSGLTIAESFRDA 268

Query: 248 KGD---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           K D   ++LL +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 269 KSDGPKDILLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKN 326

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPL S SR  D  
Sbjct: 327 GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITEMGIYPAVDPLGSTSRSLDPI 386

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               E       +  ++ R +E +DI  I G
Sbjct: 387 VVGQEHYDTAQRVKEILQRNKELQDIIAILG 417


>gi|212896596|gb|ACJ38501.1| membrane-bound ATP synthase subunit B [Cullen australasicum]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|149384467|gb|ABR25056.1| ATP synthase beta chain [Sphaeropteris celebica]
          Length = 394

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|155029347|dbj|BAF75557.1| ATP synthase beta subunit [Klaineanthus gaboniae]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRAKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917378|dbj|BAF40488.1| ATP synthase beta subunit [Byrsonima crassifolia]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|118917340|dbj|BAF40455.1| ATP synthase beta subunit [Ditaxis montevidensis]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + + L     K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 212 GVINELNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|110456712|gb|ABG74815.1| ATPase beta subunit [Jasminum subhumile]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708668|emb|CAB89988.1| ATP synthase beta subunit [Symplocos costata]
          Length = 488

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|6687623|emb|CAB65029.1| ATP synthase beta subunit [Gelsemium sempervirens]
          Length = 495

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708268|emb|CAB90065.1| ATP synthase beta subunit [Dicella nucifera]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|14718095|gb|AAK72787.1| ATP synthase beta subunit [Kiggelaria africana]
          Length = 484

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---DLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|6017792|gb|AAF01630.1| ATP synthase beta subunit [Haloragis erecta]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GVTLGRIFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAXRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|66276281|gb|AAY44155.1| ATP synthase beta subunit [Hillebrandia sandwicensis]
          Length = 477

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|229822948|ref|ZP_04449018.1| hypothetical protein GCWU000282_00240 [Catonella morbi ATCC 51271]
 gi|229787761|gb|EEP23875.1| hypothetical protein GCWU000282_00240 [Catonella morbi ATCC 51271]
          Length = 460

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 156/315 (49%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  +V +     G  ++   + F      +  S    GRV N +G+ IDG  
Sbjct: 44  GQVLEVQEDKALVQLFEGSAGINLASAKVRFTGKPLHLGVSEDMVGRVFNGMGEAIDGGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  ++I  +    + R   ++  +TGI  ID    L  GQ++ VF+GSG+    L
Sbjct: 104 DLIP-EQYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKEL 162

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR      SD    V+ + +G    E   F+ D      + +SV+ +  +++  I 
Sbjct: 163 AAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAMDRSVLFINLANDPAIE 222

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  RGYP  +++ 
Sbjct: 223 RIATPRIALTTAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTN 282

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+R L   G  P
Sbjct: 283 LSTLYERAGRIIGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSRDLYNSGYRP 342

Query: 350 PVDPLASVSRLADKA 364
           P++ L S+SRL DK 
Sbjct: 343 PINVLPSLSRLKDKG 357


>gi|217967882|ref|YP_002353388.1| V-type ATP synthase subunit B [Dictyoglomus turgidum DSM 6724]
 gi|226732463|sp|B8E137|VATB_DICTD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|217336981|gb|ACK42774.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Dictyoglomus turgidum DSM 6724]
          Length = 460

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 145/275 (52%), Gaps = 11/275 (4%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I+ S    GR  + LG+P DG   +      M+I        +R   ++  +TGI  ID 
Sbjct: 79  INLSPEILGRTFDGLGRPRDGGPEIIPQK-RMDINGSPINPYSRAYPQEFIQTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIE 207
              +  GQ+I +F+G+G+  +TL +  AR        + F  V+   +G    E   FIE
Sbjct: 138 MNTIVRGQKIPIFSGAGLPHATLAAQIARQARLLNEEEKF-AVVFGAMGITFEEANFFIE 196

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           ++     L+++V+ +  +++  I R   P  A+T AEY +   D +VL+IL  +T +A +
Sbjct: 197 NFRSTGALERTVLFINLANDPVIERIATPRFALTAAEYLAFDLDMHVLVILSDMTNYAEA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +RE++ +  E+P  RGYP  ++++L  L ER G  + +KG+IT +  + +  D+   PI 
Sbjct: 257 LREVSASRKEVPGRRGYPGYLYTDLATLYERAGRIKGKKGSITLLPILTMPEDDRTHPIP 316

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           D    I +G I L+R L   G YPP+D L S+SRL
Sbjct: 317 DLTGYITEGQIFLSRELHRRGIYPPIDVLQSLSRL 351


>gi|156530107|gb|ABU75150.1| AtpB [Brucea ferruginea]
          Length = 467

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361620|gb|ABN09252.1| ATP synthase beta subunit [Diospyros borneensis]
 gi|221078775|gb|ACL99462.1| ATP synthase beta subunit [Diospyros cf. ulo Duangjai et al. 021]
          Length = 465

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGRDTVGQTINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|119368006|dbj|BAF40494.1| ATP synthase beta subunit [Galphimia glauca]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6724283|gb|AAB51727.2| ATP synthase beta chain [Huperzia lucidula]
          Length = 454

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D   S+  G  S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 65  ATLGRIFNVLGEPVDNLGSVDAGTTSP--IHRSAPAFAQSDTKLSIFETGIKVVDLLAPY 122

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 123 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVI 182

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 183 NEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNILRFVQAG 242

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 243 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 300

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDP  S   +  + W   E+  +    +   + R++
Sbjct: 301 TTFAHLDATTVLSRGLAAKGIYPAVDPSDSTPTML-QPWIVGEQHYETAQEVKQTLQRYK 359

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 360 ELQDIIAILG 369


>gi|6467935|gb|AAF13234.1|AF197601_1 ATPase beta subunit [Triglochin maritima]
          Length = 476

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GVTLGRIFNVLGEPVD---NLGPLDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|46360706|gb|AAS89134.1| ATP synthase beta subunit [Phyllothallia nivicola]
          Length = 381

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 20/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           ++ N LG+P+D    +G G +   I    P           F+TGI+V+D+  P   G +
Sbjct: 3   KIFNVLGEPVDNLGPVGTGTV-FPIHRPAPAFTQLDTKSSIFETGIKVVDLLAPYRRGGK 61

Query: 164 IGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--N 213
           IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N
Sbjct: 62  IGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQN 120

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E +
Sbjct: 121 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEAS 180

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 181 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 238

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 239 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWVVGEEHYETAQGVKQTLQRYKELQD 297

Query: 389 IRLIGG 394
           I  I G
Sbjct: 298 IIAILG 303


>gi|62085091|gb|AAX62952.1| ATP synthase beta subunit [Acridocarpus natalitius]
          Length = 483

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|62085114|gb|AAX62963.1| ATP synthase beta subunit [Conceveiba martiana]
          Length = 480

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|293401016|ref|ZP_06645161.1| V-type sodium ATP synthase, subunit B [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291306042|gb|EFE47286.1| V-type sodium ATP synthase, subunit B [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 480

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 142/271 (52%), Gaps = 18/271 (6%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N  G+PIDG   LG+   + SM+I  +    ++R        TGI  ID    L  
Sbjct: 87  GRTFNGSGQPIDG---LGEIYAEKSMDINGQPLNPVSRVYPRNYINTGISSIDALMTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR----SDCFDKVIISLVGERGREVREFIEDYLGDN--- 213
           GQ++ +F+GSG+  + L     +    SD   K    +    G  V+  + DY   +   
Sbjct: 144 GQKLPIFSGSGMPHNELAVQLVKQAKISDGDGKNFCIVFAAMG--VKNDVADYFKRSFEE 201

Query: 214 ---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
              ++K V+ V  +++  I R + P  A+T AEY + + D  VL+IL  IT +  ++RE 
Sbjct: 202 AGVMEKVVMFVNLANDPIIERTLTPRCALTAAEYLAYEHDMQVLVILTDITSYCEALREF 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +++ GE+P  +GYP  ++S+L  L ER G  +  KG++T +  + +  D+   PI D   
Sbjct: 262 SSSKGEIPGRKGYPGYLYSDLASLYERAGIIKDAKGSVTQIPILTMPNDDITHPIPDLTG 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            I +G IVL+R+L + G YPPV  L S+SRL
Sbjct: 322 YITEGQIVLDRNLNQMGVYPPVGVLPSLSRL 352


>gi|212896600|gb|ACJ38503.1| membrane-bound ATP synthase subunit B [Glycine max]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 88  ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 145 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 204

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 205 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 265 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 323 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 382

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 383 ELQDIIAILG 392


>gi|149384417|gb|ABR25031.1| ATP synthase beta chain [Asplenium auritum var. rigidum]
          Length = 426

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 157/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  + + +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSNTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|149384667|gb|ABR25142.1| ATP synthase beta chain [Lomariopsis pollicina]
          Length = 426

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ L++    +         +   VGER RE      E  E  + D
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVID 155

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|110348961|gb|ABG73052.1| ATP synthase beta chain [Marsilea macrocarpa]
          Length = 389

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 1   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 57

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 58  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 117

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 118 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 177

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 178 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 235

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 236 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 294

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 295 LQDIIAILG 303


>gi|61968305|gb|AAX57079.1| ATP synthase beta subunit [Richeria grandis]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|14718085|gb|AAK72783.1| ATP synthase beta subunit [Idesia polycarpa]
          Length = 490

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|14718167|gb|AAK72822.1| ATP synthase beta subunit [Pelliciera rhizophorae]
          Length = 486

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|14718007|gb|AAK72745.1| ATP synthase beta subunit [Clarkia xantiana]
          Length = 458

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 152/306 (49%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKETLQRY 378

Query: 384 EETRDI 389
           +E +DI
Sbjct: 379 KELQDI 384


>gi|3850920|gb|AAC72152.1| ATP synthase beta subunit [Franklandia fucifolia]
          Length = 481

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQXDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|11034787|gb|AAG27082.1| ATP synthase beta subunit [Cabomba caroliniana]
          Length = 437

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 47  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 103

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 104 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 163

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 164 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 223

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 224 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 281

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 282 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 341

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 342 ELQDIIAILG 351


>gi|62902835|gb|AAY19332.1| ATP synthase beta subunit [Perrottetia ovata]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIXKSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|62085095|gb|AAX62954.1| ATP synthase beta subunit [Archytaea triflora]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|313576713|gb|ADR66864.1| ATP synthase beta subunit [Ternstroemia sp. WH-2010]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|212896652|gb|ACJ38529.1| membrane-bound ATP synthase subunit B [Shuteria involucrata var.
           vestita]
          Length = 470

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|195183539|dbj|BAG66981.1| ATP synthase beta subunit [Rinorea neglecta]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|195183531|dbj|BAG66978.1| ATP synthase beta subunit [Rinorea apiculata]
          Length = 488

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|184127839|gb|ACC67819.1| ATP synthase beta chain [Danaea leprieurii]
          Length = 399

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 128

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 189 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 306 LQDIIAILG 314


>gi|157689162|gb|ABV65137.1| ATP synthase CF1 beta subunit [Oxalis latifolia]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G +++   G   +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGGPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPID---NLGPVDTRTTXPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AE+F    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|110915682|gb|ABH02629.1| ATP synthase beta subunit [Nicoraepoa andina]
          Length = 474

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 197 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+ T++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSXTSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 315 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|139387437|ref|YP_001122791.1| ATP synthase CF1 beta subunit [Phaseolus vulgaris]
 gi|190358700|sp|A4GG90|ATPB_PHAVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112030959|gb|ABH88071.1| ATP synthase CF1 beta subunit [Phaseolus vulgaris]
 gi|158187164|gb|ABW22797.1| ATP synthase CF1 beta subunit [Phaseolus vulgaris]
          Length = 498

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|118917396|dbj|BAF40504.1| ATP synthase beta subunit [Antidesma pentandrum]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917344|dbj|BAF40458.1| ATP synthase beta subunit [Necepsia afzelii]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKNSG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VVNEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|61968327|gb|AAX57090.1| ATP synthase beta subunit [Zimmermannia capillipes]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|14717948|gb|AAK72716.1| ATP synthase beta subunit [Balanops vieillardii]
          Length = 485

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|14718153|gb|AAK72815.1| ATP synthase beta subunit [Nuphar variegata]
          Length = 474

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|62902863|gb|AAY19346.1| ATP synthase beta subunit [Glycine max]
          Length = 479

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNGLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|212896654|gb|ACJ38530.1| membrane-bound ATP synthase subunit B [Kennedia nigricans]
          Length = 474

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|118917328|dbj|BAF40448.1| ATP synthase beta subunit [Chaetocarpus africanus]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|61968207|gb|AAX57030.1| ATP synthase beta subunit [Antidesma alexiteria]
 gi|61968249|gb|AAX57051.1| ATP synthase beta subunit [Hieronyma oblonga]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|37721001|gb|AAN32503.1| ATP synthase beta subunit [Phormium tenax]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|66276259|gb|AAY44144.1| ATP synthase beta subunit [Begonia oxyloba]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62085194|gb|AAX63001.1| ATP synthase beta subunit [Scyphostegia borneensis]
          Length = 483

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085154|gb|AAX62982.1| ATP synthase beta subunit [Lasiocroton bahamensis]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---ELGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|323715472|gb|ADY04804.1| ATP synthase beta subunit [Hydrangea arborescens]
          Length = 496

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 102 GATLGRIFNVLGEPVDNLCPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|257852968|gb|ACV71495.1| ATP synthase beta subunit [Froesia diffusa]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|123325675|gb|ABM74462.1| ATP synthase beta subunit [Glycosmis sp. RJB GH06-111]
          Length = 463

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|123325677|gb|ABM74463.1| ATP synthase beta subunit [Glycosmis trichanthera]
          Length = 462

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDPRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|195183534|dbj|BAG66979.1| ATP synthase beta subunit [Rinorea dentata]
 gi|195183536|dbj|BAG66980.1| ATP synthase beta subunit [Rinorea ilicifolia]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|156530157|gb|ABU75175.1| AtpB [Picrasma crenata]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|156530095|gb|ABU75144.1| AtpB [Ailanthus altissima]
          Length = 464

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLAIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 197 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|110348951|gb|ABG73047.1| ATP synthase beta chain [Marsilea distorta]
          Length = 384

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|110348993|gb|ABG73068.1| ATP synthase beta chain [Marsilea vestita]
          Length = 394

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 6   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 62

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 63  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 122

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 123 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 182

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 183 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 240

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 241 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 299

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 300 LQDIIAILG 308


>gi|119367978|dbj|BAF40467.1| ATP synthase beta subunit [Croton insularis]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718036|gb|AAK72759.1| ATP synthase beta subunit [Duckeodendron cestroides]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|4063534|gb|AAC98325.1| ATP synthase beta subunit [Bursera inaguensis]
          Length = 456

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|62085089|gb|AAX62951.1| ATP synthase beta subunit [Acalypha californica]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|305671663|gb|ADM63141.1| ATP synthase beta subunit [Cardiopteris sp. van der Werff et al.
           17270]
          Length = 443

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 51  ATLGRIFNVLGEPVD---NLGPVDTRATSPIHRCAPAFIQLDTKLSIFETGIKVVDLLAP 107

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 108 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 167

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 168 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 227

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 228 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 285

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 286 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 345

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 346 ELQDIIAILG 355


>gi|118918089|dbj|BAF40434.1| ATP synthase beta subunit [Balanops pancheri]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|118917392|dbj|BAF40499.1| ATP synthase beta subunit [Sauvagesia africana]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|118917326|dbj|BAF40447.1| ATP synthase beta subunit [Caryodendron orinocense]
          Length = 480

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|118917336|dbj|BAF40452.1| ATP synthase beta subunit [Crotonogynopsis usambarica]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|11034791|gb|AAG27084.1| ATP synthase beta subunit [Gnetum gnemon]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D +  I    P           F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDTDTTFPIHRPAPAFTQLDTNLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKES 217

Query: 218 VVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            V+    +A S         +E P  R    LTA+ +AEYF    + +VLL +D+I RF 
Sbjct: 218 GVINERNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       ++  ++   +   + R
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEQHYEIAQGVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|62085103|gb|AAX62958.1| ATP synthase beta subunit [Byrsonima crassifolia]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|57868954|gb|AAW57473.1| ATP synthase beta subunit [Symplocos zizyphoides]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|257852974|gb|ACV71498.1| ATP synthase beta subunit [Trigoniastrum hypoleucum]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|149384423|gb|ABR25034.1| ATP synthase beta chain [Asplenium sandersonii]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  + + +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSNTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +          N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVAPVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|149384387|gb|ABR25016.1| ATP synthase beta chain [Asplenium auritum]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 157/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  + + +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSNTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|156530177|gb|ABU75185.1| AtpB [Samadera sp. B-Fernando 1538]
          Length = 491

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAM----NRQRVEKGFKTGIRVID 153
               GR+ N LG+P+D   +LG  D  +   + K  PA     N+  +   F+TGI+V+D
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDNKLSI---FETGIKVVD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
           +  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   
Sbjct: 151 LLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMK 210

Query: 212 -------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
                   N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 211 ESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 270

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 271 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 328

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 329 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 388

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 389 QRYKELQDIIAILG 402


>gi|156530173|gb|ABU75183.1| AtpB [Samadera bidwillii]
          Length = 491

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAM----NRQRVEKGFKTGIRVID 153
               GR+ N LG+P+D   +LG  D  +   + K  PA     N+  +   F+TGI+V+D
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDNKLSI---FETGIKVVD 150

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
           +  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   
Sbjct: 151 LLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMK 210

Query: 212 -------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
                   N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 211 ESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 270

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 271 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 328

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 329 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 388

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 389 QRYKELQDIIAILG 402


>gi|118917400|dbj|BAF40506.1| ATP synthase beta subunit [Astrocasia tremula]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917332|dbj|BAF40450.1| ATP synthase beta subunit [Chrozophora oblongifolia]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|33327761|gb|AAQ09244.1| ATP synthase beta subunit [Piper betle]
 gi|56675690|emb|CAB89720.2| ATP synthase beta subunit [Piper betle]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718109|gb|AAK72794.1| ATP synthase beta subunit [Licania tomentosa]
          Length = 475

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 92  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 148

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 149 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 208

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 209 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 268

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 269 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 326

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 327 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 386

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 387 ELQDIIAILG 396


>gi|3850922|gb|AAC72153.1| ATP synthase beta subunit [Petrophile circinata]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|16416748|gb|AAL18397.1|AF313551_1 ATP synthase beta chain [Marsilea drummondii]
 gi|110348937|gb|ABG73040.1| ATP synthase beta chain [Marsilea aegyptiaca]
 gi|110348945|gb|ABG73044.1| ATP synthase beta chain [Marsilea crenata]
 gi|110348947|gb|ABG73045.1| ATP synthase beta chain [Marsilea crenata]
 gi|110348953|gb|ABG73048.1| ATP synthase beta chain [Marsilea ephippiocarpa]
 gi|110348955|gb|ABG73049.1| ATP synthase beta chain [Marsilea fadeniana]
 gi|110348957|gb|ABG73050.1| ATP synthase beta chain [Marsilea farinosa]
 gi|110348965|gb|ABG73054.1| ATP synthase beta chain [Marsilea minuta]
 gi|110348971|gb|ABG73057.1| ATP synthase beta chain [Marsilea mollis]
 gi|110348975|gb|ABG73059.1| ATP synthase beta chain [Marsilea nashii]
 gi|110348979|gb|ABG73061.1| ATP synthase beta chain [Marsilea nubica var. gymnocarpa]
 gi|110348983|gb|ABG73063.1| ATP synthase beta chain [Marsilea oligospora]
 gi|110348995|gb|ABG73069.1| ATP synthase beta chain [Marsilea villifolia]
 gi|110348997|gb|ABG73070.1| ATP synthase beta chain [Marsilea villosa]
          Length = 395

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|62085110|gb|AAX62961.1| ATP synthase beta subunit [Clutia tomentosa]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|306485983|gb|ADM92640.1| ATP synthase CF1 beta subunit [Franklinia alatamaha]
          Length = 471

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156622713|dbj|BAF76337.1| ATP synthase beta subunit [Cycas revoluta]
          Length = 481

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVIGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 206

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 207 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 266

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 267 QAGSEVSALLGRMPXAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 324

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 325 APATTFAHLDATTVLSRGLAAKGXYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 383

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 384 RYKELQDIIAILG 396


>gi|110348991|gb|ABG73067.1| ATP synthase beta chain [Marsilea vera]
          Length = 395

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|119368026|dbj|BAF40517.1| ATP synthase beta subunit [Bruguiera gymnorhiza]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVDNLGPVNSRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|118917324|dbj|BAF40445.1| ATP synthase beta subunit [Adriana quadripartita]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|61968323|gb|AAX57088.1| ATP synthase beta subunit [Uapaca littoralis]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  +    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|61968219|gb|AAX57036.1| ATP synthase beta subunit [Bischofia javanica]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|7708201|emb|CAB90040.1| ATP synthase beta subunit [Cypripedium calceolus]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 207

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  ++    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 208 GVINEKNLGES--KVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 265

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 266 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 323

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +    
Sbjct: 324 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTS 383

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 384 QRYKELQDIIAILG 397


>gi|62085190|gb|AAX62999.1| ATP synthase beta subunit [Prockia sp. Alford 85]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|62085107|gb|AAX62960.1| ATP synthase beta subunit [Cespedesia spathulata]
          Length = 483

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|195183491|dbj|BAG66960.1| ATP synthase beta subunit [Gloeospermum dichotomum]
 gi|195183494|dbj|BAG66961.1| ATP synthase beta subunit [Gloeospermum longifolium]
 gi|195183514|dbj|BAG66970.1| ATP synthase beta subunit [Leonia crassa]
 gi|195183516|dbj|BAG66971.1| ATP synthase beta subunit [Leonia glycycarpa var. racemosa]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|148787949|gb|ABR12224.1| ATP synthase beta subunit [Hanguana malayana]
          Length = 429

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 37  ATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 154 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|155573943|dbj|BAF75538.1| ATP synthase beta subunit [Melanolepis multiglandulosa]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029313|dbj|BAF75540.1| ATP synthase beta subunit [Philyra brasiliensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119368030|dbj|BAF40519.1| ATP synthase beta subunit [Crossostylis grandiflora]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D        +  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVD-DLGPVNSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|119368034|dbj|BAF40525.1| ATP synthase beta subunit [Idesia polycarpa]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119024594|dbj|BAF40442.1| ATP synthase beta subunit [Symphonia tanalensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|61968319|gb|AAX57086.1| ATP synthase beta subunit [Spondianthus preussii]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|61968211|gb|AAX57032.1| ATP synthase beta subunit [Aporusa frutescens]
 gi|61968217|gb|AAX57035.1| ATP synthase beta subunit [Baccaurea lanceolata]
 gi|61968267|gb|AAX57060.1| ATP synthase beta subunit [Maesobotrya vermeulenii]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|61968213|gb|AAX57033.1| ATP synthase beta subunit [Astrocasia neurocarpa]
 gi|61968283|gb|AAX57068.1| ATP synthase beta subunit [Petalodiscus platyrachis]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|30351887|emb|CAD48096.1| ATP synthase beta subunit [Dipcadi heterocuspe]
          Length = 497

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|24940196|emb|CAD43396.1| ATP synthase beta subunit [Buglossoides arvensis]
          Length = 478

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGXPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|14718155|gb|AAK72816.1| ATP synthase beta subunit [Osyris lanceolata]
          Length = 470

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG P+    +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGXPVX---NLGPVDTCTTSPIHKSAPAFIQLDTKFSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
             HG +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRHGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRILGEEHYETAQRVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|260906207|ref|ZP_05914529.1| ATP synthase F1, beta subunit [Brevibacterium linens BL2]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 150/285 (52%), Gaps = 15/285 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201
            + GI+ ID+ TP   G +IG+F G+G+GK+ L+  M  R   +     + + VGER RE
Sbjct: 146 LEVGIKSIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIYRIAHNHSGTSVFAGVGERTRE 205

Query: 202 VREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             + I +       K + +V    DE P  R    L+A+T+AEYF   +  +VLL +D+I
Sbjct: 206 GNDLIMEMDEAGVFKDTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNI 265

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++T  G +P A GY  ++  E+  L ERI  +     +IT++ ++ V  D+
Sbjct: 266 FRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADD 323

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
           + DP   +  + LD    L+R +A  G YP +DPL S SR+ D     +E  ++ + +  
Sbjct: 324 YTDPAPATTFAHLDATTELSRDIASRGLYPAIDPLTSTSRILDPLIVGEEHYRVANEVKA 383

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420
           ++ + +E +DI  I     GVD + ++    VH+   I  FL Q+
Sbjct: 384 ILQKNKELQDIIAI----LGVDELGEEDKLVVHRARRIEQFLSQN 424


>gi|289579473|ref|YP_003478100.1| H(+)-transporting two-sector ATPase [Thermoanaerobacter italicus
           Ab9]
 gi|297545617|ref|YP_003677919.1| H+transporting two-sector ATPase alpha/beta subunit
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|289529186|gb|ADD03538.1| H(+)-transporting two-sector ATPase [Thermoanaerobacter italicus
           Ab9]
 gi|296843392|gb|ADH61908.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 459

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 18/361 (4%)

Query: 50  VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107
           +  G      GQV+ +N D  +V +     G  I+   + F      +  S    GRV +
Sbjct: 32  IETGSGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKIRFVGKSIELGVSIDMLGRVFD 91

Query: 108 ALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
            LG+P D G   + +  L +      P A  R    +  +TGI  ID    L  GQ++ +
Sbjct: 92  GLGRPRDKGPMIIPEKRLDINGNPLNPTA--RDYPSEFIQTGISAIDGLNTLVRGQKLPI 149

Query: 167 FAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           F+ SG+  + L +  AR      +D    V+ + +G    E   FI D+     + ++V+
Sbjct: 150 FSASGLPHAQLAAQIARQAKVLGTDSKFAVVFAAMGITFEEADYFISDFRRTGAIDRTVL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278
            +  +++  I R   P  A+T AE+ + + D +VL+I+  +T +  ++RE++    E+P 
Sbjct: 210 FINLANDPAIERIATPRMALTCAEFLAYEKDMHVLVIMTDMTNYCEALREVSAARKEVPG 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP  ++++L  + ER G  +  +G+IT +  + +  D+   PI D    I +G I+L
Sbjct: 270 RRGYPGYLYTDLATIYERAGRIKGREGSITQIPILTMPEDDKTHPIPDLTGYITEGQIIL 329

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +R L  +G YPP+D L S+SRL DK         D   L++ L     R ++ +++ +I 
Sbjct: 330 SRELYRKGIYPPIDVLPSLSRLKDKGIGHGKTREDHADLMNQLFASYARGKQAKELAVIL 389

Query: 394 G 394
           G
Sbjct: 390 G 390


>gi|149384473|gb|ABR25059.1| ATP synthase beta chain [Sphaeropteris robusta]
          Length = 394

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|159232262|emb|CAJ80646.1| ATP synthase beta subunit [Nierembergia frutescens]
 gi|159232264|emb|CAJ80647.1| ATP synthase beta subunit [Nierembergia frutescens]
          Length = 336

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 154/303 (50%), Gaps = 22/303 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     RE  E 
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYREMKES 154

Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +   +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 155 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 214

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 215 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 272

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 273 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 332

Query: 383 FEE 385
           ++E
Sbjct: 333 YKE 335


>gi|155029309|dbj|BAF75537.1| ATP synthase beta subunit [Mareya micrantha]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029359|dbj|BAF75563.1| ATP synthase beta subunit [Suregada aequoreum]
 gi|155029361|dbj|BAF75564.1| ATP synthase beta subunit [Suregada glomerulata]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118429165|gb|ABK91687.1| ATP synthase beta subunit [Azomonas macrocytogenes]
 gi|118429181|gb|ABK91695.1| ATP synthase beta subunit [Azomonas macrocytogenes]
          Length = 257

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 22  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTRE 81

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 82  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFREEGRDVLLFIDNIY 141

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 142 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 199

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 200 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 241


>gi|119368188|dbj|BAF40437.1| ATP synthase beta subunit [Parinari sp. Mlangwa et al. 1138]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917338|dbj|BAF40454.1| ATP synthase beta subunit [Dicoelia beccariana]
          Length = 485

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|7708452|emb|CAB89915.1| ATP synthase beta subunit [Irvingia malayana]
 gi|14718087|gb|AAK72784.1| ATP synthase beta subunit [Irvingia malayana]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708684|emb|CAB90019.1| ATP synthase beta subunit [Thesium humile]
          Length = 453

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 65  ATLGRIFNVLGEPID---NLGPIDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAP 121

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 122 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 181

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 182 INDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 241

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 242 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 299

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 300 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 359

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 360 ELQDIIAILG 369


>gi|313576707|gb|ADR66861.1| ATP synthase beta subunit [Ternstroemia gymnanthera]
          Length = 477

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|309322455|ref|YP_003933968.1| ATP synthase CF1 beta subunit [Eucalyptus grandis]
 gi|308223289|gb|ADO23597.1| ATP synthase CF1 beta subunit [Eucalyptus grandis]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|306773440|emb|CBJ55296.1| putative beta subunit of chloroplast ATP synthase [Cyathea howeana]
          Length = 383

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|257852926|gb|ACV71474.1| ATP synthase beta subunit [Ploiarium alternifolium]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|229915399|gb|ACQ90744.1| CF1 beta subunit of ATP synthase [Oocystis solitaria]
          Length = 480

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P  ++       F++GI+V+D+  P   
Sbjct: 98  GRIFNVLGEPVD---NLGPVENKEAFPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPYRR 154

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 214

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 215 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 274

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 275 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 332

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +   ++   + R++E 
Sbjct: 333 FAHLDATTVLSRALASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKQTLQRYKEL 391

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 392 QDIIAILG 399


>gi|169260967|gb|ACA52085.1| ATP synthase beta subunit [Lycopodium annotinum]
          Length = 424

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   SLG  D+S    I    P           F+TGI+V+D   P   
Sbjct: 38  GRIFNVLGEPVD---SLGSVDVSTTSPIHRNAPAFAQLDTKLSIFETGIKVVDPLAPYRR 94

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 95  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 154

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 155 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 214

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 215 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 272

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S   +  + W   E+  +    +   + R++E 
Sbjct: 273 FAHLDATTVLSRGLAAKGIYPAVDPLDSTPTML-QPWIVGEQHYETAQEVKQTLQRYKEL 331

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 332 QDIIAILG 339


>gi|119368016|dbj|BAF40507.1| ATP synthase beta subunit [Bischofia javanica]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917404|dbj|BAF40510.1| ATP synthase beta subunit [Meineckia phyllanthoides subsp.
           somalensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910888|gb|ABI48176.1| ATPase beta subunit [Fontinalis antipyretica var. gigantea]
          Length = 472

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D +       P PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDATTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|52082870|gb|AAU26016.1| ATPase beta subunit [Zippelia begoniifolia]
          Length = 475

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEHDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|66276287|gb|AAY44158.1| ATP synthase beta subunit [Neoalsomitra sarcophylla]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|57868936|gb|AAW57464.1| ATP synthase beta subunit [Polemonium pauciflorum]
          Length = 494

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P
Sbjct: 102 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLAIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 218

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 219 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 278

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 279 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 336

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 337 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 396

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 397 ELQDIIAILG 406


>gi|313576711|gb|ADR66863.1| ATP synthase beta subunit [Ternstroemia longipes]
          Length = 473

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|257852980|gb|ACV71501.1| ATP synthase beta subunit [Viola pubescens]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 157/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEANIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   +
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTL 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|61968221|gb|AAX57037.1| ATP synthase beta subunit [Blotia leandriana]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|16943670|emb|CAD10763.1| atp synthase, beta subunit [Dianella ensifolia]
          Length = 497

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|6689113|emb|CAB65396.1| ATP synthase beta subunit [Rogiera suffrutescens]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20467403|gb|AAL27832.1| ATPase beta subunit [Juniperus communis]
          Length = 356

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 160/320 (50%), Gaps = 22/320 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +  ++    +TG
Sbjct: 42  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDIKFSILETG 98

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 99  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 157

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VL  
Sbjct: 158 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLXF 217

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 218 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 275

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +    E  +   
Sbjct: 276 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGKEHYETAQ 335

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +   + R++E +DI  I G
Sbjct: 336 GVKQTLQRYKELQDIIAILG 355


>gi|14718250|gb|AAK72863.1| ATP synthase beta subunit [Tetrameles nudiflora]
          Length = 481

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|6689006|emb|CAB65350.1| ATP synthase beta subunit [Phyllonoma laticuspis]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTXTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708254|emb|CAB90050.1| ATP synthase beta subunit [Celastrus orbiculatus]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|14718234|gb|AAK72855.1| ATP synthase beta subunit [Stylobasium spathulatum]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|32815667|gb|AAP88230.1| ATP synthase beta subunit [Hamamelis japonica]
          Length = 457

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|62085135|gb|AAX62973.1| ATP synthase beta subunit [Hevea sp. Gillespie 4272]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 206

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 207 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 384

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 385 ELQDIIAILG 394


>gi|57868932|gb|AAW57462.1| ATP synthase beta subunit [Fouquieria columnaris]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|257852978|gb|ACV71500.1| ATP synthase beta subunit [Fusispermum laxiflorum]
          Length = 497

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRFAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|212896632|gb|ACJ38519.1| membrane-bound ATP synthase subunit B [Bolusafra bituminosa]
          Length = 465

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|123325673|gb|ABM74461.1| ATP synthase beta subunit [Glycosmis mauritiana]
          Length = 464

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|156530101|gb|ABU75147.1| AtpB [Ailanthus integrifolia]
          Length = 468

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|119367998|dbj|BAF40482.1| ATP synthase beta subunit [Irvingia malayana]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917414|dbj|BAF40522.1| ATP synthase beta subunit [Dovyalis macrocalyx]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917380|dbj|BAF40489.1| ATP synthase beta subunit [Hiraea fagifolia]
 gi|118917384|dbj|BAF40493.1| ATP synthase beta subunit [Tetrapterys glabrifolia]
 gi|118917386|dbj|BAF40495.1| ATP synthase beta subunit [Tristellateia australasiae]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718030|gb|AAK72756.1| ATP synthase beta subunit [Dialypetalanthus fuscescens]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|7708618|emb|CAB89981.1| ATP synthase beta subunit [Rheum pinchonii]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D      + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NFGPVDTCTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 217

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 218 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL R LA +G YP VDPL S S  L  +    +  +    +T ++ R
Sbjct: 336 APATTFAHLDATTVLARGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVTQILQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIITILG 407


>gi|5758918|gb|AAD50892.1| ATP synthase beta subunit [Tradescantia ohiensis]
          Length = 496

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D  ++  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---DLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|149384717|gb|ABR25167.1| ATP synthase beta chain [Platycerium stemaria]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 168/339 (49%), Gaps = 33/339 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESKV 153

Query: 220 -------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                        V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNICESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVSRARKIERFLSQ 365


>gi|195183544|dbj|BAG66983.1| ATP synthase beta subunit [Rinoreocarpus ulei]
 gi|195468859|dbj|BAG66952.1| ATP synthase beta subunit [Amphirrhox surinamensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917398|dbj|BAF40505.1| ATP synthase beta subunit [Aporusa papuana]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|4063526|gb|AAC98321.1| ATP synthase beta subunit [Ailanthus altissima]
          Length = 456

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLAIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|305671695|gb|ADM63157.1| ATP synthase beta subunit [Sambucus caerulea]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G     P      GR
Sbjct: 42  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAALSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           +++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E    + +    + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQMVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|257853484|gb|ACV71744.1| ATP synthase beta subunit [Manihot grahamii]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|123325589|gb|ABM74419.1| ATP synthase beta subunit [Choisya ternata]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|123325679|gb|ABM74464.1| ATP synthase beta subunit [Luvunga sp. TT 364]
          Length = 462

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +       F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKYAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|156530179|gb|ABU75186.1| AtpB [Samadera sp. C-Ford 4679]
          Length = 497

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAM----NRQRVEKGFKTGIRVID 153
               GR+ N LG+P+D   +LG  D  +   + K  PA     N+  +   F+TGI+V+D
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDNKLSI---FETGIKVVD 156

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
           +  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   
Sbjct: 157 LLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMK 216

Query: 212 -------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
                   N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 217 ESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 276

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 277 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 334

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 335 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 394

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 395 QRYKELQDIIAILG 408


>gi|155029365|dbj|BAF75566.1| ATP synthase beta subunit [Vernicia montana]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|155029343|dbj|BAF75555.1| ATP synthase beta subunit [Glycydendron amazonicum]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119367968|dbj|BAF40444.1| ATP synthase beta subunit [Acalypha insulana]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|113910946|gb|ABI48205.1| ATPase beta subunit [Stangeria eriopus]
          Length = 392

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 2   GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 58

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 59  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 117

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 118 GVINEQDISRSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 177

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 178 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 235

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 236 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 294

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 295 RYKELQDIIAILG 307


>gi|112361343|gb|ABI15714.1| putative ATP synthase F1 beta subunit [Pseudomonas veronii]
          Length = 458

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 136/264 (51%), Gaps = 9/264 (3%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--- 189
           PP + R    + F+TGI+ ID+  PL  G + G+F G+G+GK+ LL+    +        
Sbjct: 125 PPLVRRSTQSEVFETGIKAIDVLAPLERGGKAGLFGGAGVGKTVLLTEMIHNMIGPPGKG 184

Query: 190 -VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-S 246
             I   +GER RE  E   D      L   V++ A  +E P  R      A+T+AEYF  
Sbjct: 185 VSIFCGIGERSREGEELYRDMKAAGVLPNMVMIFAQMNEPPGARFRIGHAALTMAEYFRD 244

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL++D+I RF  +  E++   G++P   GY  ++ +EL  L ERI  +  + G 
Sbjct: 245 DQHRDVLLLVDNIFRFIQAGSEVSGLMGQMPSRLGYQPTMGTELSALEERI--ANTDSGA 302

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ +V V  D+  DP A    S L   IVL+R  A EG +P +DPL S S++      
Sbjct: 303 ITSIQAVYVPADDFTDPAAVHTFSHLSASIVLSRKRASEGLFPAIDPLQSSSKMLTPGIV 362

Query: 367 ADEK-KLVSSLTHLIHRFEETRDI 389
            +   +L  ++   + ++ E +DI
Sbjct: 363 GERHYRLAQAIRRTLAQYAELKDI 386


>gi|99640644|emb|CAJ45101.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           medullaris]
          Length = 493

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|61968247|gb|AAX57050.1| ATP synthase beta subunit [Heywoodia lucens]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|61968261|gb|AAX57057.1| ATP synthase beta subunit [Leptopus diplospermus]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|7687984|emb|CAB89713.1| ATP synthase beta subunit [Hedyosmum arborescens]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +ESP  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNESPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12005284|gb|AAG44369.1| ATP synthase beta subunit [Amborella trichopoda]
          Length = 491

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 99  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 155

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 156 HRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 215

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  +
Sbjct: 216 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQA 275

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 276 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 333

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 334 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 393

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 394 ELQDIIAILG 403


>gi|7708311|emb|CAB89906.1| ATP synthase beta subunit [Hydnocarpus heterophyllus]
 gi|14718078|gb|AAK72780.1| ATP synthase beta subunit [Hydnocarpus heterophyllus]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|49574636|ref|NP_848067.2| ATP synthase CF1 beta subunit [Adiantum capillus-veneris]
 gi|56757347|sp|O03062|ATPB_ADICA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|48476006|gb|AAB51749.3| ATP synthase CF1 beta chain [Adiantum capillus-veneris]
          Length = 493

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPVD---NLGPVQNSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|257853490|gb|ACV71747.1| ATP synthase beta subunit [Oxalis acetosella]
          Length = 485

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AE+F    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|155573949|dbj|BAF75574.1| ATP synthase beta subunit [Triadica sebifera]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029287|dbj|BAF75524.1| ATP synthase beta subunit [Neoscortechinia forbesii]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029369|dbj|BAF75569.1| ATP synthase beta subunit [Hippomane mancinella]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 213 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIIAILG 400


>gi|119368186|dbj|BAF40436.1| ATP synthase beta subunit [Licania elaeosperma]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917360|dbj|BAF40468.1| ATP synthase beta subunit [Fontainea venosa]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917364|dbj|BAF40471.1| ATP synthase beta subunit [Neoboutonia mannii]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|17066857|gb|AAF13244.2|AF197611_1 ATPase beta subunit [Berberis bealei]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|7708632|emb|CAB90005.1| ATP synthase beta subunit [Salix reticulata]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|241912902|gb|ACS72129.1| AtpB [Pterostylis oliveri]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|123325715|gb|ABM74482.1| ATP synthase beta subunit [Pleiospermium latialatum]
          Length = 467

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|155029285|dbj|BAF75523.1| ATP synthase beta subunit [Cheilosa montana]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPPIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029353|dbj|BAF75560.1| ATP synthase beta subunit [Ophellantha spinosa]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029333|dbj|BAF75550.1| ATP synthase beta subunit [Cnidoscolus aconitifolius]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029345|dbj|BAF75556.1| ATP synthase beta subunit [Hevea brasiliensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119367970|dbj|BAF40446.1| ATP synthase beta subunit [Agrostistachys borneensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|12004125|gb|AAG43902.1|AF213771_1 ATP synthase beta subunit [Clavija euerganea]
          Length = 415

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G++P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGKMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +     + +E  +    +   + R 
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIAGEEHYETAQRVKQTLQRS 398

Query: 384 EETRDIRLIGG 394
           +E  DI  I G
Sbjct: 399 KELHDIIAILG 409


>gi|46360687|gb|AAS89125.1| ATP synthase beta subunit [Jungermannia leiantha]
          Length = 381

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 3   RIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 59

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +
Sbjct: 60  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEE 119

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 120 NISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 179

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 180 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 237

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 238 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 296

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 297 DIIAILG 303


>gi|32815665|gb|AAP88229.1| ATP synthase beta subunit [Lithocarpus henryi]
          Length = 456

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|62902851|gb|AAY19340.1| ATP synthase beta subunit [Brunellia sp. Skinner et al. 43]
          Length = 452

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 59  GATLGRIFNVLGEPID---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 115

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    ++ A +     V   +  ER RE  +   +    
Sbjct: 116 PYRRGGKIGLFGGAGVGKTVLIMELINIIANAHGGVSVFGGVG-ERTREGNDLYMEMKES 174

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 175 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 234

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 235 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 292

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 293 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 352

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 353 YKELQDIIAILG 364


>gi|62085118|gb|AAX62965.1| ATP synthase beta subunit [Croton alabamensis var. alabamensis]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|323715442|gb|ADY04789.1| ATP synthase beta subunit [Nyssa ogeche]
          Length = 492

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G++P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGKMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPTVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|282881593|ref|ZP_06290262.1| ATP synthase F1, beta subunit [Prevotella timonensis CRIS 5C-B1]
 gi|281304579|gb|EFA96670.1| ATP synthase F1, beta subunit [Prevotella timonensis CRIS 5C-B1]
          Length = 509

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 155/332 (46%), Gaps = 44/332 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR++N +G+ IDG + L K +     + + PP        K    TGI+VID+  P   G
Sbjct: 95  GRMMNVIGEAIDGMEQLSKENPYP--IHRQPPVFEDLSTHKEMLATGIKVIDLLEPYMKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------G 211
            +IG+F G+G+GK+ L+     +         + + VGER RE  + I D +       G
Sbjct: 153 GKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIDSGVIRYG 212

Query: 212 DNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           +  KK++                     +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 213 EKFKKAMDEGKWDLSLVDPEELQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDRGV 272

Query: 251 N-------VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           N       ++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +
Sbjct: 273 NGDGQGGDIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGTMQERI--TSTK 330

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD    L+R + E G YP VDPL S SR+ D 
Sbjct: 331 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDP 390

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                E       +  ++  ++E +DI  I G
Sbjct: 391 LIVGKEHYNCAQRVKQILQHYQELQDIIAILG 422


>gi|212896636|gb|ACJ38521.1| membrane-bound ATP synthase subunit B [Lespedeza bicolor]
          Length = 470

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|170178332|gb|ACB10585.1| ATP synthase beta subunit [Cornus alternifolia]
          Length = 455

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 71  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGG 127

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 365

Query: 390 RLIGG 394
             I G
Sbjct: 366 IAILG 370


>gi|170178326|gb|ACB10582.1| ATP synthase beta subunit [Cornus racemosa]
          Length = 450

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 71  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGG 127

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 365

Query: 390 RLIGG 394
             I G
Sbjct: 366 IAILG 370


>gi|218176251|ref|YP_002364508.1| ATP synthase CF1 beta subunit [Festuca arundinacea]
 gi|215882335|gb|ACJ70765.1| ATP synthase CF1 beta subunit [Festuca arundinacea]
          Length = 499

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 159/312 (50%), Gaps = 23/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNTAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAH 264
               N+++S V  V    +E P  R    LTA+T+AEYF   +K D VLL +D+I RF  
Sbjct: 222 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKAD-VLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSEL-PRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
           +  E++   G +P A GY  ++ +E+  +L ERI  ++K  G+IT++ +V V  D+  DP
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSKLQERIASTKK--GSITSIQAVYVPADDLTDP 338

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 339 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQR 398

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 399 YKELQDIIAILG 410


>gi|56675525|emb|CAF21942.2| ATP synthase beta subunit [Fagus grandifolia]
          Length = 464

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|6688863|emb|CAB65307.1| ATP synthase beta subunit [Nymphoides geminata]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708578|emb|CAB89975.1| ATP synthase beta subunit [Rinorea bengalensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|17224727|gb|AAL37085.1| ATP synthase beta subunit [Dioscorea hamiltonii]
          Length = 478

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   A   +E  +    +     R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPAIVGEEHYETAQKVKQTSQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|66276289|gb|AAY44159.1| ATP synthase beta subunit [Octomeles sumatrana]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62085093|gb|AAX62953.1| ATP synthase beta subunit [Aporusa frutescens]
          Length = 475

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|155573939|dbj|BAF75535.1| ATP synthase beta subunit [Macaranga aleuritoides]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGQDTVGQEINVTCEVQQLLGNNRVRAVAMNATDGLTRGMEVIDTGTPLSVPVGGVTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|155029315|dbj|BAF75541.1| ATP synthase beta subunit [Plukenetia polyadenia]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---ELGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|155029319|dbj|BAF75543.1| ATP synthase beta subunit [Speranskia cantonensis]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|99640639|emb|CAJ45100.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           brunei]
          Length = 493

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|68164810|ref|YP_247606.1| ATP synthase CF1 beta subunit [Cucumis sativus]
 gi|67511405|emb|CAJ00765.1| ATP synthase CF1 beta chain [Cucumis sativus]
 gi|115498310|gb|ABI98752.1| ATP synthase CF1 beta subunit [Cucumis sativus]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|61968313|gb|AAX57083.1| ATP synthase beta subunit [Savia bojeriana]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|61968253|gb|AAX57053.1| ATP synthase beta subunit [Keayodendron bridelioides]
          Length = 477

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 91  ATLGRIFNVLGEPVD---DLGPVDTHATYPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 147

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 148 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 207

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 208 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRHVNEQDVLLFIDNIFRFVQA 267

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 268 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++
Sbjct: 326 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGTEHYETAQKVKQTLQRYK 385

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 386 ELQDIIAILG 395


>gi|16416756|gb|AAL18401.1|AF313555_1 ATP synthase beta chain [Haplomitrium hookeri]
          Length = 394

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---DLGPVDTNVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTSQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|257852924|gb|ACV71473.1| ATP synthase beta subunit [Erythrospermum phytolaccoides]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GVTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|155029293|dbj|BAF75527.1| ATP synthase beta subunit [Adelia ricinella]
 gi|155029303|dbj|BAF75532.1| ATP synthase beta subunit [Lasiocroton macrophyllus]
 gi|155029305|dbj|BAF75533.1| ATP synthase beta subunit [Leucocroton microphyllus]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---ELGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029331|dbj|BAF75549.1| ATP synthase beta subunit [Blachia siamensis]
          Length = 481

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|56675899|emb|CAB90061.2| ATP synthase beta subunit [Delosperma echinatum]
          Length = 496

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAPRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|7708568|emb|CAB89973.1| ATP synthase beta subunit [Quisqualis indica]
          Length = 483

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KGRDTLGQXINVTCEVQQLLGNNRVRAVAMSATDGLMRGIEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 99  IFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 155

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 215

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 216 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 275

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 276 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 333

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 334 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 393

Query: 390 RLIGG 394
             I G
Sbjct: 394 IAILG 398


>gi|241912876|gb|ACS72116.1| AtpB [Pachyplectron arifolium]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029301|dbj|BAF75531.1| ATP synthase beta subunit [Erythrococca anomala]
 gi|155029307|dbj|BAF75534.1| ATP synthase beta subunit [Lobanilia bakeriana]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|126661078|ref|ZP_01732160.1| F0F1-type ATP synthase, alpha subunit [Cyanothece sp. CCY0110]
 gi|126617622|gb|EAZ88409.1| F0F1-type ATP synthase, alpha subunit [Cyanothece sp. CCY0110]
          Length = 505

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 164/339 (48%), Gaps = 15/339 (4%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           D LG    +++D + +  +G  E +  G  V   G+  +I       GR+++ LG+P+D 
Sbjct: 62  DILGIAFNLDVDELGVILLGNSEHLEAGQEVKRTGKIVQIPVGEALLGRIVDGLGRPLDN 121

Query: 116 DDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
                KG +S +    I  K PP ++R  V    +TG++V+D   P+  GQR  +     
Sbjct: 122 -----KGTISTQTQFPIERKAPPFIHRAPVTVPLQTGLKVVDALIPVGRGQRELIIGDRQ 176

Query: 172 IGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
           IGK+ +   ++  + D     I   +G+R   V + IE     D L  S+VVVA  ++ P
Sbjct: 177 IGKTAIAVDTILNQKDKDVICIYCAIGQRTSAVAKVIEQLRQADALDYSIVVVADGEDPP 236

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ + P  A +I EYF  +G +VL++ D +TR A + RE++      P    YP  +F 
Sbjct: 237 GLQYITPYAATSIGEYFMERGRDVLIVYDDLTRHAWAYRELSLLLRRPPGREAYPGDIFY 296

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +E   G++TA+  +     + +  I  ++ SI DG I L+  L ++G
Sbjct: 297 IHSRLLERSTHLREEWGGGSLTALPIIETQAQSISAYIPTNLISITDGQIYLSPDLYQKG 356

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             PPV    SVSR+  K       ++   L     +F+E
Sbjct: 357 ILPPVSVGKSVSRVGGKTQLRAYGEVAGDLRLSYSQFQE 395


>gi|119367994|dbj|BAF40480.1| ATP synthase beta subunit [Sacoglottis sp. Hammel 18390]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPSFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119367976|dbj|BAF40466.1| ATP synthase beta subunit [Codiaeum peltatum]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708634|emb|CAB89997.1| ATP synthase beta subunit [Sambucus nigra]
          Length = 467

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E    + +    + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQMVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|3850950|gb|AAC72167.1| ATP synthase beta subunit [Musgravea heterophylla]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYPRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085105|gb|AAX62959.1| ATP synthase beta subunit [Centroplacus glaucinus]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085101|gb|AAX62957.1| ATP synthase beta subunit [Bischofia javanica]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|290490156|gb|ADD31485.1| ATP synthase CF1 beta subunit protein [Nelumbo nucifera]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|289066811|ref|YP_003434329.1| ATP synthase CF1 beta subunit [Vigna radiata]
 gi|259019998|gb|ACV90196.1| ATP synthase CF1 beta subunit [Vigna radiata]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530161|gb|ABU75177.1| AtpB [Picrasma excelsa]
          Length = 496

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|118917426|dbj|BAF40529.1| ATP synthase beta subunit [Agation deplanchei]
 gi|195183466|dbj|BAG66949.1| ATP synthase beta subunit [Agatea schlechteri]
 gi|195183468|dbj|BAG66950.1| ATP synthase beta subunit [Agatea veillonii]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 212 GVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEEHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|56675896|emb|CAB89996.2| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|24940190|emb|CAD43377.1| ATP synthase beta subunit [Lappula squarrosa]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708165|emb|CAB90015.1| ATP synthase beta subunit [Berberidopsis corallina]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|29726138|gb|AAD00595.2| ATP synthase beta subunit [Papaver orientale]
          Length = 491

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIXNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPXAVGYQPTLSTEMGXLQERI--TSTKEGSITSIQAVYVXADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 332 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|7708185|emb|CAB90033.1| ATP synthase beta subunit [Boykinia rotundifolia]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 82  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 138

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 139 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 198

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 199 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 258

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 259 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 316

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 317 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 376

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 377 YETAQRVKQTLQRYKELQDIIAILG 401


>gi|15375070|gb|AAK94782.1| ATP synthase beta subunit [Micranthes integrifolia]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 82  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 138

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 139 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 198

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 199 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 258

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 259 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 316

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 317 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 376

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 377 YETAQRVKQTLQRYKELQDIIAILG 401


>gi|3850912|gb|AAC72148.1| ATP synthase beta subunit [Cenarrhenes nitida]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRIKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085141|gb|AAX62976.1| ATP synthase beta subunit [Homalanthus populneus]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|327310712|ref|YP_004337609.1| H+-transporting two-sector ATPase subunits alpha/beta
           [Thermoproteus uzoniensis 768-20]
 gi|326947191|gb|AEA12297.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Thermoproteus uzoniensis 768-20]
          Length = 468

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 175/353 (49%), Gaps = 20/353 (5%)

Query: 61  QVIRINLDIVYICPVGIGEEISL---GDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
           QVI +  D  Y     +G  + L   G  V  +G+ +R+  S    GR+++  G+P D  
Sbjct: 47  QVIEVGTD--YAVAQVLGPTLGLPAKGSTVRFYGKTYRLGVSEDLIGRILDGKGQPRDHM 104

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
                 D   +I  +      R+  E+  +TGI  ID    L  GQ++ +F+G+G+  + 
Sbjct: 105 PLPPPQDFR-DINGEPLNPYAREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNV 163

Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           + +   R      S+    V+   +G R  E   F++++     L+++V V+  + +   
Sbjct: 164 MAAQVVRQATVRGSEEGFAVVFVGIGIRSEEAMYFMDEFRRTGALRRAVAVINLASDPVA 223

Query: 230 LRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R +AP   +TIAE+ +   G +VL+++  +T +A  +RE+++  GELP  RGYP  +++
Sbjct: 224 ERILAPRVGLTIAEHLAWDLGYHVLVVITDMTNYAEGLRELSSGKGELPGRRGYPGYMYT 283

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G +   KG++T    + +  D+   PI D    I +G +VL+RS+  +G Y
Sbjct: 284 DLASIYERAGRARGRKGSVTQFPILTMPHDDITHPIPDLSGYITEGQLVLSRSMWGKGIY 343

Query: 349 PPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           PP D + S+SRLA  A        D K + ++L     R  E R +  + G R
Sbjct: 344 PPFDIIMSLSRLAKDAIGEGKTREDHKDVANTLIAAYSRALELRSLATLVGER 396


>gi|317046180|ref|YP_004072469.1| ATPase beta subunit [Corynocarpus laevigata]
 gi|309252897|gb|ADO60317.1| ATPase beta subunit [Corynocarpus laevigata]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|306773438|emb|CBJ55295.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           tricolor]
          Length = 383

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|257853478|gb|ACV71741.1| ATP synthase beta subunit [Hemerocallis minor]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 206

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 207 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 384

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 385 ELQDIIAILG 394


>gi|257852960|gb|ACV71491.1| ATP synthase beta subunit [Lophira lanceolata]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|241912850|gb|ACS72103.1| AtpB [Microchilus arietinus]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|156530169|gb|ABU75181.1| AtpB [Quassia amara]
          Length = 471

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I +  P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHNPAPAFIQLDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 194 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|119368194|dbj|BAF40440.1| ATP synthase beta subunit [Garcinia subelliptica]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GVTLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917342|dbj|BAF40456.1| ATP synthase beta subunit [Macaranga tanarius]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGQDTVGQEINVTCEVQQLLGNNRVRAVAMNATDGLTRGMEVIDTGTPLSVPVGGVTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|118917352|dbj|BAF40462.1| ATP synthase beta subunit [Romanoa tamnoides]
 gi|155029291|dbj|BAF75526.1| ATP synthase beta subunit [Acidoton urens]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|7708199|emb|CAB90041.1| ATP synthase beta subunit [Corokia cotoneaster]
          Length = 459

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E    + +    + R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQMVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|62184054|gb|AAX73338.1| ATP synthase beta subunit [Banksia tricuspis]
          Length = 497

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085116|gb|AAX62964.1| ATP synthase beta subunit [Croizatia brevipetiolata]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|62085139|gb|AAX62975.1| ATP synthase beta subunit [Hirtella bicornis]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|57868934|gb|AAW57463.1| ATP synthase beta subunit [Fouquieria fasciculata]
          Length = 494

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|57868940|gb|AAW57466.1| ATP synthase beta subunit [Cantua buxifolia]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 215

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 216 GVINEQNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 273

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 274 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 331

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 332 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 391

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 392 QRYKELQDIIAILG 405


>gi|305671647|gb|ADM63133.1| ATP synthase beta subunit [Adoxa moschatellina]
          Length = 481

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E    + +    + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQMVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029371|dbj|BAF75570.1| ATP synthase beta subunit [Homalanthus nutans]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|115564931|emb|CAJ70618.1| ATP synthase beta subunit [Sinowilsonia henryi]
          Length = 467

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|33327741|gb|AAQ09234.1| ATP synthase beta subunit [Berberis aquifolium]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       DE  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|24940272|emb|CAD43400.1| ATP synthase beta subunit [Trigonotis peduncularis]
          Length = 388

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 4   ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 60

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 61  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 120

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 121 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 180

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 181 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPAP 238

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 239 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 298

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 299 ELQDIIAILG 308


>gi|7708478|emb|CAB89928.1| ATP synthase beta subunit [Lloydia serotina]
          Length = 494

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL++D+I RF  
Sbjct: 219 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLVIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7688429|emb|CAB89730.1| ATP synthase beta subunit [Xanthophyllum sp. Coode 7760]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|7708516|emb|CAB89943.1| ATP synthase beta subunit [Nemopanthus mucronatus]
          Length = 475

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 35  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 95  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 151

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 211

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 212 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 271

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 272 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 329

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 330 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 389

Query: 390 RLIGG 394
             I G
Sbjct: 390 IAILG 394


>gi|7708298|emb|CAB90074.1| ATP synthase beta subunit [Erica sicula]
          Length = 475

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPLDTRTTSPIHRSAPAFIELETKLCIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKET 204

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 205 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 264

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 265 QAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 322

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +       K+   +   + R
Sbjct: 323 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGHKHYKIAQRVKQTLQR 382

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 383 YKELQDIIAILG 394


>gi|195183529|dbj|BAG66977.1| ATP synthase beta subunit [Paypayrola grandiflora]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|114804272|ref|YP_762268.1| ATP synthase CF1 beta subunit [Morus indica]
 gi|122166798|sp|Q09X10|ATPB_MORIN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|78100324|gb|ABB20965.1| ATP synthase CF1 beta subunit [Morus indica]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVRQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20269428|gb|AAM17941.1| ATP synthase beta subunit [Marcgraviastrum mixtum]
          Length = 448

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 67  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLAIFETGIKVVDLLA 123

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 124 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 183

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 184 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 243

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E+    G++P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 244 AGSEVFALLGKMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 301

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 302 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 361

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 362 KELQDIIAILG 372


>gi|14718119|gb|AAK72799.1| ATP synthase beta subunit [Malesherbia linearifolia]
          Length = 467

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V D+  P 
Sbjct: 81  GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQSDTKLSIFETGIKVXDLLAPH 139

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 140 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 199

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 200 NEENITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 259

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 260 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 318 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 377

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 378 LQDIIAILG 386


>gi|7708264|emb|CAB90058.1| ATP synthase beta subunit [Datisca cannabina]
          Length = 491

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|58081516|gb|AAW65233.1| AtpB [Pellia epiphylla]
          Length = 382

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 165/335 (49%), Gaps = 29/335 (8%)

Query: 104 RVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D   +LG    + +  I    P           F+TGI+V+D+  P   G
Sbjct: 4   RIFNVLGEPVD---NLGPVNANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYRRG 60

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S  G  G   RE  + Y+           
Sbjct: 61  GKIGLFGGAGVGKTVLIMESINNIAKAHGGVSAFGGVGERTREGNDLYMEMKESKVINEQ 120

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEY       +VLL +D+I RF  +  E+
Sbjct: 121 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQAGSEV 180

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 181 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 238

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 297

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 298 DIIAI----PGLDELSEEDRLTVARARKIERFLSQ 328


>gi|62085200|gb|AAX63004.1| ATP synthase beta subunit [Tetrorchidium sp. Bell 93-204]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDSRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|62085202|gb|AAX63005.1| ATP synthase beta subunit [Thryallis longifolia]
          Length = 483

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|260780659|ref|YP_003227076.1| ATP synthase CF1 beta subunit [Bryopsis hypnoides]
 gi|260176737|gb|ACX33746.1| ATP synthase CF1 beta subunit [Bryopsis hypnoides]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 28/311 (9%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+ +D   +LG    +   +I    P  ++       F+TGI+V+D+  P   
Sbjct: 98  GRIFNVLGETVD---NLGPVNTETGFQIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 154

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            
Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 213

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           ED L ++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 214 EDQLSES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ ++ V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R+
Sbjct: 330 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|170178357|gb|ACB10598.1| ATP synthase beta subunit [Cornus hongkongensis]
          Length = 450

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGPITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|123325703|gb|ABM74476.1| ATP synthase beta subunit [Naringi crenulata]
          Length = 461

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|123325699|gb|ABM74474.1| ATP synthase beta subunit [Monanthocitrus cornuta]
          Length = 461

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|149798693|gb|ABR32037.1| ATP synthase beta chain [Hecistopteris pumila]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|155029367|dbj|BAF75567.1| ATP synthase beta subunit [Adenopeltis serrata]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029321|dbj|BAF75544.1| ATP synthase beta subunit [Sumbaviopsis albicans]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119367972|dbj|BAF40453.1| ATP synthase beta subunit [Dalechampia spathulata]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTCATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|61968215|gb|AAX57034.1| ATP synthase beta subunit [Baccaurea javanica]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|20269424|gb|AAM17939.1| ATP synthase beta subunit [Madhuca microphylla]
          Length = 462

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|5758874|gb|AAD50848.1| ATP synthase beta subunit [Cyperus albostriatus]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 155/313 (49%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D+S    I    P  +        F+TGI+V+D+  P
Sbjct: 102 ATLGRIFNVLGEPID---NLGPVDISTTSPIHRSAPAFIELDTRLSIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYIEMKESG 217

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262
              E  L ++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF
Sbjct: 218 VINEKTLSES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 275

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  D
Sbjct: 276 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTQKGAITSIQAVYVPADDLTD 333

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP V PL S S +       +E  +   ++     
Sbjct: 334 PAPATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTMLQPNIVGEEHYQTAQNVKQTSQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|4206592|gb|AAD11727.1| ATP synthase beta subunit [Lunasia amara]
          Length = 465

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|62085137|gb|AAX62974.1| ATP synthase beta subunit [Heywoodia lucens]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|332105883|gb|AEE01404.1| ATP synthase beta chain [Schoutenia ovata]
          Length = 493

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|261749621|ref|YP_003257307.1| H(+)-transporting two-sector ATPase subunit beta [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
 gi|261497714|gb|ACX84164.1| H(+)-transporting two-sector ATPase, beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
          Length = 502

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 55/329 (16%)

Query: 77  IGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
           + ++IS G  V F  G   +       GRV N LG+PIDG  +L +        SKV P 
Sbjct: 65  VTDQISRGQEVEFLGGPISMPIGESINGRVFNVLGEPIDGLGNLDR--------SKVRPI 116

Query: 136 MNRQRVEKGFKT-------GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            N     K   T       GI+VID+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 117 HNHAPEFKDLSTDTEILYTGIKVIDLIEPYPKGGKIGLFGGAGVGKTVLIQELINNVAKG 176

Query: 189 ---KVIISLVGERGRE----VREFIE-------DYLGDNLKK-----------------S 217
              + + + VGER RE    +RE +E       D   +++KK                 +
Sbjct: 177 HGGRSVFAGVGERTREGNDLLREMLESGIIKYGDSFMESMKKGGWDISKVDKEALKESKA 236

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIAT 271
             V    +E P  R    L+ +T+AEY+        KG +VL  +D+I RF  +  E++ 
Sbjct: 237 AFVFGQMNEPPGARARVALSGLTLAEYYRDQNIKGKKGQDVLFFIDNIFRFTQAGSEVSA 296

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P + GY  ++ SE+  + ERI  +  + G+IT+V +V V  D+  DP      S 
Sbjct: 297 LLGRIPSSVGYQPTLSSEMGAMQERI--TSTKNGSITSVQAVYVPADDLTDPAPSITFSH 354

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           LD   VL+R +A  G YP +DPL S SR+
Sbjct: 355 LDATTVLSRKIASLGIYPAIDPLDSTSRI 383


>gi|225544131|ref|YP_002720119.1| atpB [Jatropha curcas]
 gi|224979572|gb|ACN72699.1| atpB [Jatropha curcas]
          Length = 495

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|157689148|gb|ABV65130.1| ATP synthase CF1 beta subunit [Berberidopsis corallina]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530109|gb|ABU75151.1| AtpB [Brucea guineensis]
          Length = 495

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|119367982|dbj|BAF40472.1| ATP synthase beta subunit [Schinziophyton rautanenii]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|115564941|emb|CAJ70598.1| ATP synthase beta subunit [Parrotia persica]
          Length = 469

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|24940192|emb|CAD43378.1| ATP synthase beta subunit [Lindelofia longiflora]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEIKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62902865|gb|AAY19347.1| ATP synthase beta subunit [Humiria balsamifera]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLP 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLYSTSTMLQPQIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|62085145|gb|AAX62978.1| ATP synthase beta subunit [Hura crepitans]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|323715486|gb|ADY04811.1| ATP synthase beta subunit [Jamesia americana]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ KS V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP +DPL S S  L  +       ++   +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAIDPLDSTSTMLQPRVVGEGHYEIAQRVKETLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|257484915|ref|ZP_05638956.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 156

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/133 (47%), Positives = 90/133 (67%), Gaps = 1/133 (0%)

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ L+
Sbjct: 24  LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLI 83

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EFIE  LG + LK+SVVV + +D++P++R  A +    IAEYF  KG NVLL
Sbjct: 84  GERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLL 143

Query: 255 ILDSITRFAHSIR 267
           ++DS+TRFA + R
Sbjct: 144 LMDSLTRFAQAQR 156


>gi|169794080|ref|YP_001718444.1| ATP synthase CF1 beta subunit [Manihot esculenta]
 gi|190358679|sp|B1NWF7|ATPB_MANES RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|157695892|gb|ABV66161.1| ATP synthase CF1 beta subunit [Manihot esculenta]
          Length = 500

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 107 ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 163

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 164 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 223

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 224 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 283

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 284 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 341

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 342 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 401

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 402 ELQDIIAILG 411


>gi|119367988|dbj|BAF40476.1| ATP synthase beta subunit [Hura crepitans]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|115564927|emb|CAJ70616.1| ATP synthase beta subunit [Trichocladus crinitus]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|115442862|ref|XP_001218238.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114188107|gb|EAU29807.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 413

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 136/277 (49%), Gaps = 19/277 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR++N  G PID    + +G   M I ++ PPA   Q        TGI+V+D+  P 
Sbjct: 120 ATLGRIMNVTGDPIDERGPI-EGVRLMPIHTE-PPAYTEQSTHAEILVTGIKVVDLLAPY 177

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
             G +IG+F G+G   +     ++        + + VGER RE  +   +         D
Sbjct: 178 ARGGKIGLFGGAGNNIAKAHGGYS--------VFTGVGERTREGNDLYHEMQETGVIKLD 229

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
              K  +V    +E P  R    LT +TIAEYF  +G +VLL +D+I RF  +  E++  
Sbjct: 230 GDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEGQDVLLFIDNIFRFTQAGSEVSAL 289

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   +    L
Sbjct: 290 LGRIPSAVGYQPTLAVDMGAMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFIHL 347

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           D    L+R ++E G YP VDPL S SRL D     +E
Sbjct: 348 DATTELSRGISELGIYPAVDPLGSKSRLMDPRIVGEE 384


>gi|14718236|gb|AAK72856.1| ATP synthase beta subunit [Sullivantia oregana]
          Length = 483

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 83  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 139

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 140 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 199

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 200 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 259

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 260 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 317

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 318 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 377

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 378 YETAQRVKQTLQRYKELQDIIAILG 402


>gi|7708554|emb|CAB89957.1| ATP synthase beta subunit [Podocarpus milanjianus]
          Length = 377

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 140/276 (50%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D S       P PA  +   +   F+TGI+V+D+  
Sbjct: 80  GTTLGRIFNVLGEPVD---DLGPVDASTRSPIHRPAPAFTQLDTKFSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +     
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 196

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 197 VIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA  G YP VDPL S S +
Sbjct: 315 PATTFAHLDATTVLSRGLASXGIYPAVDPLDSTSTM 350


>gi|32815663|gb|AAP88228.1| ATP synthase beta subunit [Quercus multinervis]
          Length = 457

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|4206584|gb|AAD11723.1| ATP synthase beta subunit [Chorilaena quercifolia]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|3850966|gb|AAC72175.1| ATP synthase beta subunit [Euplassa inaequalis]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESE 212

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINKQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62085173|gb|AAX62991.1| ATP synthase beta subunit [Paradrypetes subintegrifolia]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D        +  I    P  +        F+TGI+V+D+  P 
Sbjct: 89  GATLGRIFNVLGEPVD-DLGPVNNRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 148 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 207

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 208 NEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 267

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 268 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 325

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 326 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 385

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 386 LQDIIAILG 394


>gi|17370781|sp|O03064|ATPB_ADIRA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|6724303|gb|AAB51748.2| ATP synthase beta chain [Adiantum raddianum]
          Length = 396

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 9   LGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 65

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 66  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVIN 125

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 126 EQNIAESKVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKRDVLLFIDNIFRFVQAGS 185

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 186 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 243

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 244 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 302

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 303 LQDIIAI----PGLD 313


>gi|213495654|gb|ACJ49079.1| AtpB [Acacia pulchella]
          Length = 428

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 60  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 116

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 117 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 176

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 177 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 236

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 237 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 294

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 295 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 354

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 355 KELQDIIAILG 365


>gi|123325573|gb|ABM74411.1| ATP synthase beta subunit [Aeglopsis chevalieri]
 gi|123325575|gb|ABM74412.1| ATP synthase beta subunit [Afraegle paniculata]
 gi|123325581|gb|ABM74415.1| ATP synthase beta subunit [Balsamocitrus dawei]
 gi|123325709|gb|ABM74479.1| ATP synthase beta subunit [Pamburus missionis]
 gi|123325723|gb|ABM74486.1| ATP synthase beta subunit [Triphasia trifolia]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|123325595|gb|ABM74422.1| ATP synthase beta subunit [Citropsis schweinfurthii]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|166836590|gb|ABY90527.1| ATP synthase beta chain [Pilularia americana]
          Length = 395

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S+      P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSITFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRTPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|155573947|dbj|BAF75572.1| ATP synthase beta subunit [Pedilanthus tithymaloides]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPID---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|190358670|sp|A6BM09|ATPB_GNEPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|149941374|dbj|BAF64854.1| ATP synthase CF1 beta subunit [Gnetum parvifolium]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D +  I    P           F+TGI+V+D+  P
Sbjct: 101 ATLGRIFNVLGEPVD---NLGPVDTDTTFPIHRPAPAFPQLDTNLSIFETGIKVVDLLAP 157

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 158 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 217

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  +
Sbjct: 218 INEKNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQA 277

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 278 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 335

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       ++  ++   +   + R++
Sbjct: 336 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEQHYEIAQGVKQTLQRYK 395

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 396 ELQDIIAILG 405


>gi|124361816|gb|ABN09350.1| ATP synthase beta subunit [Halesia carolina]
          Length = 465

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|115564933|emb|CAJ70619.1| ATP synthase beta subunit [Distylium myricoides]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|113910872|gb|ABI48168.1| ATPase beta subunit [Mnium hornum]
          Length = 472

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 162/312 (51%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG F G+G+GK+     L++  A++     V   +  ER RE      E  E  
Sbjct: 140 YRRGGKIGSFGGAGVGKTVPIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 198

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +   +N+ +S V  V   ++E P  R    LTA+T+AEY       +VLL +D+I RF  
Sbjct: 199 VINEENISESKVALVYGQTNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|33312212|gb|AAQ04022.1| ATP synthase beta subunit [Stimpsonia chamaedryoides]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDN-VLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    +  VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQXVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|8388947|gb|AAF74823.1|AF156882_1 ATP synthase beta subunit [Eriostemon brevifolius]
          Length = 471

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|62085097|gb|AAX62955.1| ATP synthase beta subunit [Atuna racemosa]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 96  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 213 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 330

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 390

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 391 ELQDIIAILG 400


>gi|57868924|gb|AAW57458.1| ATP synthase beta subunit [Aucuba japonica]
          Length = 494

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 101 GSTLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|212896648|gb|ACJ38527.1| membrane-bound ATP synthase subunit B [Desmodium pauciflorum]
          Length = 461

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GTTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|123325593|gb|ABM74421.1| ATP synthase beta subunit [Citropsis daweana]
 gi|123325717|gb|ABM74483.1| ATP synthase beta subunit [Swinglea glutinosa]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|206900327|ref|YP_002251209.1| V-type ATP synthase beta chain [Dictyoglomus thermophilum H-6-12]
 gi|238058265|sp|B5YFA1|VATB_DICT6 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|206739430|gb|ACI18488.1| V-type ATP synthase beta chain [Dictyoglomus thermophilum H-6-12]
          Length = 460

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 144/275 (52%), Gaps = 11/275 (4%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I+ S    GR  + LG+P DG   +      M+I        +R   ++  +TGI  ID 
Sbjct: 79  INLSPEILGRTFDGLGRPRDGGPEIIPQK-RMDINGSPINPYSRAYPQEFIQTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIE 207
              +  GQ+I +F+G+G+  +TL +  AR        + F  V+   +G    E   FIE
Sbjct: 138 MNTIVRGQKIPIFSGAGLPHATLAAQIARQARLLNEEEKF-AVVFGAMGITFEEANFFIE 196

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           ++     L+++V+ +  +++  I R   P  A+T AEY +   D +VL+IL  +T +A +
Sbjct: 197 NFKNTGALERTVLFINLANDPVIERIATPRFALTAAEYLAFDLDMHVLVILSDMTNYAEA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +RE++ +  E+P  RGYP  ++++L  L ER G    +KG+IT +  + +  D+   PI 
Sbjct: 257 LREVSASRKEVPGRRGYPGYLYTDLATLYERAGRIRGKKGSITLLPILTMPEDDRTHPIP 316

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           D    I +G I L+R L   G YPP+D L S+SRL
Sbjct: 317 DLTGYITEGQIFLSRELHRRGIYPPIDVLQSLSRL 351


>gi|156530083|gb|ABU75138.1| AtpB [Melia azedarach]
          Length = 492

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 44  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDMGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 220

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 221 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 280

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 281 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 338

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 339 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 398

Query: 390 RLIGG 394
             I G
Sbjct: 399 IAILG 403


>gi|155029357|dbj|BAF75562.1| ATP synthase beta subunit [Ricinocarpos pinifolius]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPSFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119367986|dbj|BAF40475.1| ATP synthase beta subunit [Excoecaria cochinchinensis]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|37720973|gb|AAN32489.1| ATP synthase beta subunit [Typha latifolia]
          Length = 484

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62902847|gb|AAY19338.1| ATP synthase beta subunit [Zinowiewia concinna]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 95  GATLGRIFNVLGEPVDNLGPVNTRTTS-PIHKSAPAFIQLDTKLSIFETGIKVVDLLAPY 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 213

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 214 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 273

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 274 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 331

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 332 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 391

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 392 LQDIIAILG 400


>gi|4206610|gb|AAD11736.1| ATP synthase beta subunit [Trichilia emetica]
 gi|7708682|emb|CAB90017.1| ATP synthase beta subunit [Trichilia emetica]
          Length = 477

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPSPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|56675873|emb|CAD43384.2| ATP synthase beta subunit [Omphalodes verna]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|30351891|emb|CAD48098.1| ATP synthase beta subunit [Merwilla sp. Puff H219]
          Length = 493

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G     P A    GR
Sbjct: 48  KGRDTVGQQIHVTCEVQQLLGYNRVRAVAMSATDALTRGMEVIDTGAALSVPVAGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+T I+V+D+  P   G 
Sbjct: 108 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTTLSIFETAIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G      RE  + Y+           N
Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIANAHGGVSVFGGVVERTREGNDLYMEMKESGVINEKN 224

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 225 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 284

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 402

Query: 390 RLIGG 394
             I G
Sbjct: 403 IAILG 407


>gi|20269418|gb|AAM17936.1| ATP synthase beta subunit [Heliamphora sp. Anderberg s.n.]
          Length = 449

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|14718175|gb|AAK72826.1| ATP synthase beta subunit [Philydrella pygmaea]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|4063566|gb|AAC98341.1| ATP synthase beta subunit [Simarouba glauca]
          Length = 456

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               G + N LG+P+D    +     S  I    P  +        F+TGI+V+ +  P 
Sbjct: 78  GATLGXIFNVLGEPVDNLGPVXTRTTS-PIHKPAPAFIQLDTKLSIFETGIKVVXLLAPY 136

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 137 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESGVI 196

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 197 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 256

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 257 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 314

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 315 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 374

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 375 LQDIIAILG 383


>gi|6017840|gb|AAF01654.1| ATP synthase beta subunit [Schisandra chinensis]
          Length = 480

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F TGI+V+D+  
Sbjct: 86  GSTLGRIFNVLGEPVD---NLGPVDTLTTSPIHRSAPAFIQLDTKLSIFXTGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|62902817|gb|AAY19323.1| ATP synthase beta subunit [Mortonia greggii]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +         +   VGER RE  +   +     
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVFGGVGERTREGNDLXMEMKESG 211

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|323715450|gb|ADY04793.1| ATP synthase beta subunit [Hydrostachys angustisecta]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINENNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|312285189|gb|ADQ64336.1| ATP synthase beta subunit [Anomospermum grandifolium]
          Length = 469

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GVTLGRIFNVLGEPID---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++ E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AVSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|149384469|gb|ABR25057.1| ATP synthase beta chain [Sphaeropteris horrida]
          Length = 394

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|110348969|gb|ABG73056.1| ATP synthase beta chain [Marsilea minuta]
          Length = 388

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P   
Sbjct: 1   GRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 57

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 58  GGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 117

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 118 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 177

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 178 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 235

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 236 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 294

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 295 QDIIAILG 302


>gi|56675679|emb|CAB63702.2| atp synthase beta subunit [Pistacia vera]
          Length = 499

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|30351903|emb|CAD48104.1| ATP synthase beta subunit [Drimiopsis sp. MP H642]
          Length = 495

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708652|emb|CAB90011.1| ATP synthase beta subunit [Spathiphyllum wallisii]
          Length = 491

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 104 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 221 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 280

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 338

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 398

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 399 ELQDIIAILG 408


>gi|14718201|gb|AAK72839.1| ATP synthase beta subunit [Quiina pteridophylla]
          Length = 486

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GTTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|15705380|gb|AAL05618.1| AtpB [Sarcococca confusa]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|3850930|gb|AAC72157.1| ATP synthase beta subunit [Leucadendron salignum]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|4206608|gb|AAD11735.1| ATP synthase beta subunit [Pleiospermium alatum]
          Length = 485

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|62902861|gb|AAY19345.1| ATP synthase beta subunit [Fagus grandifolia]
          Length = 488

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62184048|gb|AAX73335.1| ATP synthase beta subunit [Banksia quercifolia]
          Length = 497

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|148787939|gb|ABR12219.1| ATP synthase beta subunit [Tradescantia ohiensis]
          Length = 427

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D  ++  I    P  +        F+TGI+V+D+  P
Sbjct: 35  ATLGRIFNVLGEPVD---DLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 151

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 152 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 211

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R++
Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRYK 329

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 330 ELQDIIAILG 339


>gi|149798701|gb|ABR32041.1| ATP synthase beta chain [Monogramma graminea]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|121720620|ref|YP_001001541.1| ATP synthase CF1 beta subunit [Nuphar advena]
 gi|69214418|gb|AAZ03789.1| ATP synthase beta chain [Nuphar advena]
 gi|84682211|gb|ABC60465.1| ATP synthase CF1 beta subunit [Nuphar advena]
          Length = 495

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|15425588|emb|CAC60262.1| ATP synthase beta subunit [Pentaphragma ellipticum]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|32815659|gb|AAP88226.1| ATP synthase beta subunit [Castanea seguinii]
 gi|32815661|gb|AAP88227.1| ATP synthase beta subunit [Castanopsis tibetana]
          Length = 457

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|62085196|gb|AAX63002.1| ATP synthase beta subunit [Suregada boiviniana]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 206

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 207 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 384

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 385 ELQDIIAILG 394


>gi|62085112|gb|AAX62962.1| ATP synthase beta subunit [Codiaeum variegatum]
          Length = 482

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|57868926|gb|AAW57459.1| ATP synthase beta subunit [Ilex repanda]
          Length = 493

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|323715436|gb|ADY04786.1| ATP synthase beta subunit [Camptotheca acuminata]
          Length = 468

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 200 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 318 ATTFAHLDATXVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 377

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 378 ELQDIIAILG 387


>gi|325954508|ref|YP_004238168.1| ATP synthase subunit beta [Weeksella virosa DSM 16922]
 gi|323437126|gb|ADX67590.1| ATP synthase subunit beta [Weeksella virosa DSM 16922]
          Length = 502

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 164/355 (46%), Gaps = 43/355 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N +G  IDG  +L K D  + I    P   +     +   TGI+VID+  P   G 
Sbjct: 91  GRVFNVVGDAIDGLGNLDK-DNGLPIHRPAPKFEDLSTSTEVLFTGIKVIDLIEPYAKGG 149

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   GD
Sbjct: 150 KIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIRYGD 209

Query: 213 NL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-----S 246
           +                       K+  V    +E P  R    LT +T+AEYF      
Sbjct: 210 DFMHSMEEGGWDLDKVDKEVMKDSKATFVFGQMNEPPGARARVALTGLTLAEYFRDGDGK 269

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G+
Sbjct: 270 GPGRDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKNGS 327

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           IT+V +V V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR L  +  
Sbjct: 328 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLDRKIASLGIYPAVDPLNSTSRILTPEIV 387

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQ 419
             +       +  ++ R+   +DI  I G     +   DK  VH+   I  FL Q
Sbjct: 388 GKEHYDTAQRVKEILQRYNALQDIIAILGMEELSE--EDKLVVHRARRIQRFLSQ 440


>gi|305671637|gb|ADM63128.1| ATP synthase beta subunit [Aralia spinosa]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KDRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|149384659|gb|ABR25138.1| ATP synthase beta chain [Lindsaea madagascariensis]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 37  ATLGRIFNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEKNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+  +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSTQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAISG 341


>gi|149384455|gb|ABR25050.1| ATP synthase beta chain [Alsophila salvinii]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 170/336 (50%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S       P PA  +   +   F+TGI+V+D+  P   
Sbjct: 40  GRISNVLGEPVD---NLGPIESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 97  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 156

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 217 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 275 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 333

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 334 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|149384453|gb|ABR25049.1| ATP synthase beta chain [Cyathea dregei]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 171/336 (50%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 40  GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 97  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 156

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 217 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 275 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 333

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 334 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|149384657|gb|ABR25137.1| ATP synthase beta chain [Lindsaea blotiana]
          Length = 426

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 37  ATLGRIFNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEKNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+  +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSTQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAISG 341


>gi|124361656|gb|ABN09270.1| ATP synthase beta subunit [Diospyros fasciculosa]
 gi|221078705|gb|ACL99427.1| ATP synthase beta subunit [Diospyros fasciculosa]
          Length = 465

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 30  KGRDTVGQPISVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGVTLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|119368028|dbj|BAF40518.1| ATP synthase beta subunit [Carallia brachiata]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D        +  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVD-DLGPVNSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|115564929|emb|CAJ70617.1| ATP synthase beta subunit [Fortunearia sinensis]
 gi|115564943|emb|CAJ70599.1| ATP synthase beta subunit [Sycopsis sinensis]
          Length = 468

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|19033091|gb|AAL83530.1|AF408802_1 ATP synthase beta subunit [Klebsormidium subtilissimum]
          Length = 402

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---NLGPVNNTKTFPIHRAAPAFTQLDTKLAIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKES 152

Query: 218 VV-------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            V             V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 153 KVINEQDISQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 212

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 213 QAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDP 270

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 271 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKETLQ 329

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 330 RYKELQDIIAILG 342


>gi|7708640|emb|CAB90007.1| ATP synthase beta subunit [Saxifraga retusa]
          Length = 491

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 88  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 144

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 145 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 204

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 205 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 264

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 265 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 322

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 323 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEH 382

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 383 YETAQRVKQTLQRYKELQDIIAILG 407


>gi|8517653|emb|CAB94374.1| ATP synthase beta subunit [Phelline comosa]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850976|gb|AAC72180.1| ATP synthase beta subunit [Alloxylon wickhamii]
          Length = 490

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|224830479|gb|ACN66335.1| ATP synthase beta chain [Nandina domestica]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|123325713|gb|ABM74481.1| ATP synthase beta subunit [Paramignya scandens]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|194267346|gb|ACF35659.1| ATP synthase beta subunit [Euplassa inaequalis]
          Length = 445

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINKQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530217|gb|ABU75205.1| AtpB [Soulamea amara]
          Length = 473

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|156530099|gb|ABU75146.1| AtpB [Ailanthus fordii]
          Length = 440

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 46  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 102

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 103 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 162

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 163 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 222

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 223 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 280

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 281 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 340

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 341 KELQDIIAILG 351


>gi|89242546|gb|ABD64631.1| ATPase beta subunit [Hydrocleys nymphoides]
          Length = 436

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|114329975|ref|YP_740657.1| ATP synthase CF1 beta subunit [Nandina domestica]
 gi|122165954|sp|Q09FV4|ATPB_NANDO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|114054477|gb|ABI49870.1| ATP synthase CF1 beta subunit [Nandina domestica]
          Length = 498

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|61968231|gb|AAX57042.1| ATP synthase beta subunit [Bridelia retusa]
          Length = 479

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIELDTELSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNTQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGTKHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|52082881|gb|AAU26021.1| ATPase beta subunit [Aristolochia gigantea]
          Length = 477

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|52082896|gb|AAU26028.1| ATPase beta subunit [Peperomia serpens]
          Length = 466

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 163/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLG 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  + FIE  + 
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLFIE--MK 197

Query: 212 D-------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
           D       NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 198 DSGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 257

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 258 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 315

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 316 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSSMLQPRIVGEEHYETAQRVKQTS 375

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 376 QRYKELQDIIAILG 389


>gi|20467391|gb|AAL27826.1| ATPase beta subunit [Pseudotsuga menziesii]
          Length = 436

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 30/317 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P  
Sbjct: 71  LGRIFNVLGEPVD---NLGPVDARITSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYR 127

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 128 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGV 185

Query: 220 VVATS-------------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           +   S             +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 186 INEQSISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 245

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP A
Sbjct: 246 GSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPAA 303

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 304 ATTFAHSDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWMVGEEHYETAQGVKETLQRY 362

Query: 384 EETRDIRLIGGYRPGVD 400
           +E +DI  I    PG+D
Sbjct: 363 KELQDIIAI----PGLD 375


>gi|21633439|gb|AAM52194.1| ATP synthase beta subunit [Cardiochlamys madagascariensis]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LGKP+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 99  GSTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 214

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 215 GVINEETIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 272

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 273 FVQAGSEVSALLGXMPSAVGYRPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 330

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 331 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 390

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 391 QRYKELQDIIAILG 404


>gi|20384959|gb|AAM19146.1| ATP synthase beta subunit [Desmidium sp. UTEX LB 612]
          Length = 402

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 162/312 (51%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  + ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 40  LGRIFNVLGEPVD---ELGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +           
Sbjct: 97  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 155

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            ED + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 156 NEDNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 213

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 214 AGSEVSALLGRMPSAVGYQPTLGTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPA 271

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   ++  +    +   + R
Sbjct: 272 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGSEHYETAQGVKKTLQR 330

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 331 YKELQDIIAILG 342


>gi|62184076|gb|AAX73349.1| ATP synthase beta subunit [Austromuellera trinervia]
          Length = 496

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|170178334|gb|ACB10586.1| ATP synthase beta subunit [Swida controversa]
          Length = 451

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 HRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 183 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 360

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 361 ELQDIIAILG 370


>gi|222084181|ref|YP_002519775.1| ATP synthase CF1 beta chain [Gnetum parvifolium]
 gi|220983518|dbj|BAH11286.1| ATP synthase CF1 beta chain [Gnetum parvifolium]
          Length = 485

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D +  I    P           F+TGI+V+D+  P
Sbjct: 104 ATLGRIFNVLGEPVD---NLGPVDTDTTFPIHRPAPAFPQLDTNLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  +
Sbjct: 221 INEKNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQA 280

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 338

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       ++  ++   +   + R++
Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEQHYEIAQGVKQTLQRYK 398

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 399 ELQDIIAILG 408


>gi|194267379|gb|ACF35675.1| ATP synthase beta subunit [Macadamia jansenii]
          Length = 480

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|119368180|dbj|BAF40430.1| ATP synthase beta subunit [Camptostylus mannii]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  VTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|119367980|dbj|BAF40470.1| ATP synthase beta subunit [Manihot esculenta]
          Length = 486

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|118917358|dbj|BAF40465.1| ATP synthase beta subunit [Baloghia inophylla]
 gi|155029329|dbj|BAF75548.1| ATP synthase beta subunit [Bertya sharpeana]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|115564925|emb|CAJ70593.1| ATP synthase beta subunit [Ostrearia australiana]
          Length = 467

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|91983089|gb|ABE68641.1| ATP synthase subunit B [Turpinia paniculata]
          Length = 474

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|24940162|emb|CAD43366.1| ATP synthase beta subunit [Borago officinalis]
          Length = 483

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKSGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|306773444|emb|CBJ55298.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           aeneifolia]
 gi|306773446|emb|CBJ55299.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris
           glauca]
          Length = 383

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|257852944|gb|ACV71483.1| ATP synthase beta subunit [Moultonianthus leembruggianus]
          Length = 497

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|194267373|gb|ACF35672.1| ATP synthase beta subunit [Lasjia claudiensis]
          Length = 483

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLATKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|155029355|dbj|BAF75561.1| ATP synthase beta subunit [Ostodes paniculata]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|37720979|gb|AAN32492.1| ATP synthase beta subunit [Asphodelus albus]
          Length = 497

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDN-VLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    +  VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQXVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6687120|emb|CAB64831.1| ATP synthase beta subunit [Cajophora acuminata]
          Length = 498

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|8452779|emb|CAB90010.1| ATP synthase beta subunit [Staphylea trifolia]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6689004|emb|CAB65366.1| ATP synthase beta subunit [Panax quinquefolius]
          Length = 498

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KDRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|6706180|emb|CAB65904.1| ATP synthase beta subunit [Gilia capitata]
          Length = 491

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708205|emb|CAB90047.1| ATP synthase beta subunit [Casuarina equisetifolia]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|305671667|gb|ADM63143.1| ATP synthase beta subunit [Polyscias guilfoylei]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQGVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|258647872|ref|ZP_05735341.1| ATP synthase F1, beta subunit [Prevotella tannerae ATCC 51259]
 gi|260851704|gb|EEX71573.1| ATP synthase F1, beta subunit [Prevotella tannerae ATCC 51259]
          Length = 511

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 44/332 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N  G  IDG  S+ KG  +  I    P   + +   +   TGI+VID+  P   G 
Sbjct: 97  GRMLNVTGSTIDGLHSVDKGADAYPIHRPAPDFKDLKTSTEILYTGIKVIDLLEPYSKGG 156

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207
           + G+F G+G+GK+ L+     ++    D F   + + VGER RE    +RE IE      
Sbjct: 157 KTGLFGGAGVGKTVLIMELINNIAKGHDGFS--VFAGVGERTREGNDLLREMIESGVIKY 214

Query: 208 ------------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF---- 245
                             DY      ++ ++    +E P  R    L+ +++AE F    
Sbjct: 215 GKEFTDAMEKGEWDLSKVDYNEVVKSQATLIYGQMNEPPGARASVALSGLSVAESFRDSG 274

Query: 246 --SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
               K  ++L  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +
Sbjct: 275 VKEGKATDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSSEMGAMQERI--TSTK 332

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R + E G YP VDPLAS SR+ D 
Sbjct: 333 NGSITSIQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLASTSRILDP 392

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                E       +  ++ ++ E +DI  I G
Sbjct: 393 NIIGKEHYDCAQRVKQILQKYMELQDIIAILG 424


>gi|194267368|gb|ACF35670.1| ATP synthase beta subunit [Catalepidia heyana]
          Length = 495

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361764|gb|ABN09324.1| ATP synthase beta subunit [Diospyros sp. K20613]
          Length = 465

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|119350525|gb|ABL63213.1| AtpB [Oocystis apiculata]
          Length = 387

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P  ++       F++GI+V+D+  P   
Sbjct: 36  GRIFNVLGEPVD---NLGPVENKEAFPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPYRR 92

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 93  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 152

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 153 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 212

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 213 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 270

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R+LA +G YP VDPL S S +  + W   E+  +   ++   + R++E 
Sbjct: 271 FAHLDATTVLSRALASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKQTLQRYKEL 329

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 330 QDIIAILG 337


>gi|52082893|gb|AAU26027.1| ATPase beta subunit [Aristolochia grandiflora]
          Length = 477

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|24940172|emb|CAD43370.1| ATP synthase beta subunit [Cynoglossum officinale]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|5001565|gb|AAD37029.1|AF092103_1 ATP synthase beta subunit [Altingia excelsa]
          Length = 494

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|62184004|gb|AAX73313.1| ATP synthase beta subunit [Banksia ilicifolia]
 gi|62184006|gb|AAX73314.1| ATP synthase beta subunit [Banksia cuneata]
 gi|62184008|gb|AAX73315.1| ATP synthase beta subunit [Banksia elegans]
 gi|62184010|gb|AAX73316.1| ATP synthase beta subunit [Banksia elderiana]
 gi|62184012|gb|AAX73317.1| ATP synthase beta subunit [Banksia lindleyana]
 gi|62184018|gb|AAX73320.1| ATP synthase beta subunit [Banksia candolleana]
 gi|62184020|gb|AAX73321.1| ATP synthase beta subunit [Banksia sceptrum]
 gi|62184022|gb|AAX73322.1| ATP synthase beta subunit [Banksia baxteri]
 gi|62184024|gb|AAX73323.1| ATP synthase beta subunit [Banksia speciosa]
 gi|62184026|gb|AAX73324.1| ATP synthase beta subunit [Banksia menziesii]
 gi|62184028|gb|AAX73325.1| ATP synthase beta subunit [Banksia baueri]
 gi|62184032|gb|AAX73327.1| ATP synthase beta subunit [Banksia ashbyi]
 gi|62184058|gb|AAX73340.1| ATP synthase beta subunit [Banksia foliosissima]
 gi|62184060|gb|AAX73341.1| ATP synthase beta subunit [Banksia serratuloides]
 gi|62184062|gb|AAX73342.1| ATP synthase beta subunit [Banksia calophylla]
 gi|62184064|gb|AAX73343.1| ATP synthase beta subunit [Banksia sessilis]
 gi|62184066|gb|AAX73344.1| ATP synthase beta subunit [Banksia splendida]
 gi|62184068|gb|AAX73345.1| ATP synthase beta subunit [Banksia formosa]
          Length = 497

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830570|gb|ACN66380.1| ATP synthase beta chain [Pycnarrhena celebica]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 171/364 (46%), Gaps = 27/364 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 44  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +G    S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 104 IFNVLGEPVDNLGPVGSRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 162

Query: 165 GVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL------ 214
           G+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +      
Sbjct: 163 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQNI 221

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++ 
Sbjct: 222 VESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSA 281

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 282 LLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAH 339

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +DI 
Sbjct: 340 LDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDII 399

Query: 391 LIGG 394
            I G
Sbjct: 400 XILG 403


>gi|254425650|ref|ZP_05039367.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335]
 gi|196188073|gb|EDX83038.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335]
          Length = 479

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 149/297 (50%), Gaps = 10/297 (3%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           A   GRV N  G PIDG  ++     S+   S VP +    + +   +TGI+ ID+  P+
Sbjct: 83  AKLLGRVFNVFGDPIDGQAAVAGPRRSLH-ASPVPLSQRATQTDI-LETGIKAIDLLAPI 140

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214
             G + G+F G+G+GK+ L++    +       +SL   +GER RE  E   +      L
Sbjct: 141 ERGGKAGLFGGAGVGKTILITEMIHNVVRQYRGVSLFCGIGERSREGEELYREMKSAGVL 200

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
             +V+V    +E P  R      A+T+AEYF  +   +VLL++D++ RF  +  E++   
Sbjct: 201 DNTVMVFGQMNEPPGARFRVGHAALTMAEYFRDEMHRDVLLMIDNVFRFIQAGSEVSGLI 260

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G+LP   GY  ++ ++L  L ERI     +   IT+V +V V  D+  DP A    S L 
Sbjct: 261 GQLPSRVGYQPTLATDLAALEERI--CSTQSAAITSVQAVYVPADDLTDPAAVHTFSHLS 318

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             IVL+R    EG YP VDPL S S+L   +       K+  ++   +  +EE +DI
Sbjct: 319 ASIVLSRKRMSEGLYPAVDPLQSGSKLLTPSVVGQRHYKIAQAVRITLADYEELKDI 375


>gi|194267364|gb|ACF35668.1| ATP synthase beta subunit [Virotia neurophylla]
          Length = 497

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530159|gb|ABU75176.1| AtpB [Picrasma javanica]
          Length = 495

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|115564939|emb|CAJ70597.1| ATP synthase beta subunit [Molinadendron sinaloense]
          Length = 467

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|115564935|emb|CAJ70620.1| ATP synthase beta subunit [Fothergilla major]
          Length = 464

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|7708187|emb|CAB90037.1| ATP synthase beta subunit [Carallia brachiata]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D        +  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVD-DLGPVNSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|5758899|gb|AAD50873.1| ATP synthase beta subunit [Musa acuminata]
          Length = 496

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLETKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|66276265|gb|AAY44147.1| ATP synthase beta subunit [Coriaria nepalensis]
          Length = 488

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|195183481|dbj|BAG66956.1| ATP synthase beta subunit [Corynostylis arborea]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 173/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E  + +  
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEE 217

Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 218 KIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEEHYETAQRVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|194267339|gb|ACF35656.1| ATP synthase beta subunit [Carnarvonia araliifolia]
          Length = 497

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|164566153|gb|ABY61219.1| ATP synthase beta subunit [Marattia laxa]
          Length = 394

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 162/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 122

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 123 NQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 241 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 300 ELQDIIAILG 309


>gi|156598339|gb|ABU85430.1| ATP synthase CF1 beta subunit [Musa acuminata]
          Length = 498

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLETKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|156530087|gb|ABU75140.1| AtpB [Meliaceae sp. NBGB 19514782]
          Length = 488

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|155029373|dbj|BAF75571.1| ATP synthase beta subunit [Monadenium crispum]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPID---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|33318659|gb|AAQ05213.1| ATP synthase beta subunit [Ceratozamia miqueliana]
          Length = 484

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 210 GVINEQDISRSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 328 APXTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 386

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 387 RYKELQDIIAILG 399


>gi|7708171|emb|CAB90030.1| ATP synthase beta subunit [Borago officinalis]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKSGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|15425594|emb|CAC60271.1| ATP synthase beta subunit [Quintinia quatrefagesii]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|75330464|sp|Q8MBK3|ATPB_CRETR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633371|gb|AAM52160.1| ATP synthase beta subunit [Cressa truxillensis]
          Length = 490

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---KLGPVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|66276269|gb|AAY44149.1| ATP synthase beta subunit [Coriaria sarmentosa]
          Length = 488

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62184038|gb|AAX73330.1| ATP synthase beta subunit [Banksia benthamiana]
          Length = 497

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|52788825|gb|AAU87385.1| ATP synthase beta chain [Asplenium nidus]
          Length = 383

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVQSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 64  RGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 122

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 123 NEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 241 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 300 ELQDIIAILG 309


>gi|323715440|gb|ADY04788.1| ATP synthase beta subunit [Nyssa sinensis]
          Length = 483

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|305671651|gb|ADM63135.1| ATP synthase beta subunit [Triplostegia glandulifera]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       ++  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGNKHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|148787945|gb|ABR12222.1| ATP synthase beta subunit [Philydrella drummondii]
          Length = 431

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 39  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 95

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 96  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 155

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 156 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 215

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 216 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 273

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 274 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 333

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 334 ELQDIIAILG 343


>gi|156530221|gb|ABU75207.1| AtpB [Soulamea terminalioides]
          Length = 482

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|155029341|dbj|BAF75554.1| ATP synthase beta subunit [Endospermum moluccanum]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|16943668|emb|CAD10762.1| atp synthase, beta subunit [Caesia contorta]
          Length = 494

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGDPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLAIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINQKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|3850908|gb|AAC72146.1| ATP synthase beta subunit [Symphionema montanum]
          Length = 490

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|4206574|gb|AAD11718.1| ATP synthase beta subunit [Phellodendron amurense]
          Length = 477

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|3850910|gb|AAC72147.1| ATP synthase beta subunit [Eidothea zoexylocarya]
          Length = 490

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|57868928|gb|AAW57460.1| ATP synthase beta subunit [Pentamerista neotropica]
          Length = 486

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|323715446|gb|ADY04791.1| ATP synthase beta subunit [Grubbia tomentosa]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|148887703|gb|ABR15428.1| ATP synthase beta subunit [Biebersteinia multifida]
          Length = 477

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|194267381|gb|ACF35676.1| ATP synthase beta subunit [Brabejum stellatifolium]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530103|gb|ABU75148.1| AtpB [Ailanthus triphysa]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|33318671|gb|AAQ05219.1| ATP synthase beta subunit [Stangeria eriopus]
          Length = 424

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 149

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 150 GVINEQDISRSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 268 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 326

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 327 RYKELQDIIAILG 339


>gi|18077609|emb|CAD11927.1| ATP synthase beta subunit [Platyspermation crassifolium]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|21633379|gb|AAM52164.1| ATP synthase beta subunit [Stylisma patens]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGAPVD---NLGAVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|62085129|gb|AAX62970.1| ATP synthase beta subunit [Endospermum moluccanum]
          Length = 482

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|221078781|gb|ACL99465.1| ATP synthase beta subunit [Diospyros umbrosa]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|123325665|gb|ABM74457.1| ATP synthase beta subunit [Citrus japonica]
          Length = 466

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +       F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTXSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|194267371|gb|ACF35671.1| ATP synthase beta subunit [Lasjia whelanii]
          Length = 475

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|89242554|gb|ABD64635.1| ATPase beta subunit [Stegolepis sp. Qiu 97132]
          Length = 436

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGDPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|37721009|gb|AAN32507.1| ATP synthase beta subunit [Allium textile]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|24940170|emb|CAD43369.1| ATP synthase beta subunit [Cryptantha virgata]
          Length = 488

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708329|emb|CAB89908.1| ATP synthase beta subunit [Helwingia japonica]
 gi|14718070|gb|AAK72776.1| ATP synthase beta subunit [Helwingia japonica]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718024|gb|AAK72753.1| ATP synthase beta subunit [Cucurbita pepo]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 97  GATLGRIFNVLGEPIDNXGPVDTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 156 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 215

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 216 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 275

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 276 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 333

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 334 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVEQTLQRYKE 393

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 394 LQDIIAILG 402


>gi|6017816|gb|AAF01642.1| ATP synthase beta subunit [Nepenthes alata]
          Length = 492

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|91214126|ref|YP_538748.1| ATP synthase CF1 beta subunit [Glycine max]
 gi|118573752|sp|Q2PMV0|ATPB_SOYBN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|83595727|gb|ABC25108.1| ATP synthase CF1 beta subunit [Glycine max]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|62184030|gb|AAX73326.1| ATP synthase beta subunit [Banksia attenuata]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|221078701|gb|ACL99425.1| ATP synthase beta subunit [Diospyros dictyonema]
          Length = 463

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSSIHRPAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|155029289|dbj|BAF75525.1| ATP synthase beta subunit [Neoscortechinia kingii]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDN-VLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    +  VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQYVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|124361746|gb|ABN09315.1| ATP synthase beta subunit [Diospyros texana]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|61968251|gb|AAX57052.1| ATP synthase beta subunit [Hymenocardia acida]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|290490144|gb|ADD31479.1| ATP synthase CF1 beta subunit protein [Aucuba japonica]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 104 GSTLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|194267348|gb|ACF35660.1| ATP synthase beta subunit [Sleumerodendron austrocaledonicum]
 gi|194267352|gb|ACF35662.1| ATP synthase beta subunit [Kermadecia pronyensis]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|159227386|emb|CAJ80484.1| ATP synthase beta subunit [Physalis sp. P140]
          Length = 335

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           EE
Sbjct: 334 EE 335


>gi|138277483|gb|AAQ09252.2| ATP synthase beta subunit [Taxus brevifolia]
          Length = 478

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  + L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 90  TTLGRIFNVLGEPVD---DLGPVNALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 205

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 206 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|118429171|gb|ABK91690.1| ATP synthase beta subunit [Azotobacter beijerinckii]
 gi|118429173|gb|ABK91691.1| ATP synthase beta subunit [Azotobacter beijerinckii]
          Length = 257

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 22  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTRE 81

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 82  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 141

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 142 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 199

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 200 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 241


>gi|124361642|gb|ABN09263.1| ATP synthase beta subunit [Diospyros crassinervis]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|113910862|gb|ABI48163.1| ATPase beta subunit [Leucobryum glaucum]
          Length = 472

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D   P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDPSAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTSAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|24940268|emb|CAD43390.1| ATP synthase beta subunit [Trichodesma scotti]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|21633369|gb|AAM52159.1| ATP synthase beta subunit [Breweria rotundifolia]
          Length = 480

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTKTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP 
Sbjct: 269 AGSEVSALMGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITLIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|5001593|gb|AAD37043.1|AF092117_1 ATP synthase beta subunit [Coriaria myrtifolia]
          Length = 494

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|62184034|gb|AAX73328.1| ATP synthase beta subunit [Banksia coccinea]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|331082885|ref|ZP_08332006.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400026|gb|EGG79679.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 461

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 161/329 (48%), Gaps = 22/329 (6%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +F V  G  S  LG+++ I  +   I      E +SL +    L  H     +SP     
Sbjct: 31  EFRVDDG--SKKLGRIVEIYEEKAVIQVFEGTENMSLSNTHTRLSGHPMEVELSPD--IL 86

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N +GKPIDG   LG    ++ + I       + R+      +TGI  ID  T L  
Sbjct: 87  GRTFNGIGKPIDG---LGPVIPEMKLNINGLPLNPVTREYPRNFIQTGISAIDGLTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+G+G+    L        S+ + SD    ++ + +G +      F   +    
Sbjct: 144 GQKLPIFSGNGLPHDQLAAQIVQQASLGSNSDEKFAIVFAAMGVKYDVAEFFRRTFEESG 203

Query: 214 LKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271
           +   VV+       P++ ++  P  A+T AEY +  KG ++L+IL  IT F  ++RE+++
Sbjct: 204 VSDHVVMYLNLANDPVVERLITPKVALTAAEYLAFEKGMHILVILTDITSFCEAMREVSS 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE+P  +GYP  ++SEL  L ER G      G++T +  + +  D+   PI D    I
Sbjct: 264 SKGEIPSRKGYPGYLYSELATLYERAGIVRGGTGSVTQIPILTMPNDDITHPIPDLTGYI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +G IVL+R L  +  YPP++ L S+SRL
Sbjct: 324 TEGQIVLDRQLHGQAIYPPINVLPSLSRL 352


>gi|157689160|gb|ABV65136.1| ATP synthase CF1 beta subunit [Liquidambar styraciflua]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530153|gb|ABU75173.1| AtpB [Picrasma quassioides]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|146188928|emb|CAJ34343.1| atp synthase subunit beta [Soyauxia talbotii]
          Length = 481

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|124361606|gb|ABN09245.1| ATP synthase beta subunit [Diospyros abyssinica]
          Length = 464

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 83  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 200 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|124361638|gb|ABN09261.1| ATP synthase beta subunit [Diospyros consolatae]
          Length = 455

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|118917370|dbj|BAF40484.1| ATP synthase beta subunit [Lacistema aggregatum]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 210

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    VA S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 211 SGVINEKNVAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 270

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 271 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 328

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 329 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|37545702|gb|AAM97783.1| ATP synthase beta subunit [Corynotheca micrantha]
          Length = 469

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|24940246|emb|CAD43397.1| ATP synthase beta subunit [Nemophila insignis]
          Length = 475

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 87  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 143

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 144 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 203

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 204 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 322 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 381

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 382 ELQDIIAILG 391


>gi|32815641|gb|AAP88217.1| ATP synthase beta subunit [Casuarina equisetifolia]
          Length = 457

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|5758876|gb|AAD50850.1| ATP synthase beta subunit [Dietes flavida]
          Length = 496

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RFA 
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFAQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|4206572|gb|AAD11717.1| ATP synthase beta subunit [Adenandra uniflora]
          Length = 468

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|4206596|gb|AAD11729.1| ATP synthase beta subunit [Correa pulchella]
          Length = 476

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 206

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 207 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 384

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 385 ELQDIIAILG 394


>gi|320536196|ref|ZP_08036244.1| ATP synthase [Treponema phagedenis F0421]
 gi|320146952|gb|EFW38520.1| ATP synthase [Treponema phagedenis F0421]
          Length = 481

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 13/290 (4%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GRV + LGKPIDG   +   +L       + P   R       +TGI  ID    
Sbjct: 83  SEGLMGRVFDGLGKPIDGYPEVFSSELRNVNGYPINP-YARIYPRDFIQTGISSIDGMNT 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLG 211
           L  GQ++ +F+G+G+  + L +   R       D    ++ + +G +    R FIE++  
Sbjct: 142 LIRGQKLPIFSGNGLSHNKLTAQIIRQAKILSGDEEFVMVFAGMGIKYDVARFFIENFEK 201

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
              L + V+ ++ +D   I R + P  A+T AEY +  KG +VL++L  +T +  ++REI
Sbjct: 202 TGVLSRVVMFLSLADAPSIERIITPRCALTAAEYLAFEKGKHVLVVLTDMTNYCEALREI 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +    E+P  +GYP  ++S+L  L ER G  +  +G+IT +  + +  D+ + PI D   
Sbjct: 262 SATLSEVPGRKGYPGYLYSDLAELYERAGRIKGSEGSITQIPILSMPSDDISHPIPDLTG 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSS 375
            I +G IVL+R L ++G YPP+  L S+SRL      +  + D+ + VSS
Sbjct: 322 YITEGQIVLDRELFQKGIYPPISVLPSLSRLMKDGIGEGMTRDDHQAVSS 371


>gi|290490150|gb|ADD31482.1| ATP synthase CF1 beta subunit protein [Ilex cornuta]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQEVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|123325681|gb|ABM74465.1| ATP synthase beta subunit [Merope angulata]
          Length = 466

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|156622717|dbj|BAF76339.1| ATP synthase beta subunit [Nelumbo nucifera]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850934|gb|AAC72159.1| ATP synthase beta subunit [Carnarvonia araliifolia]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850906|gb|AAC72145.1| ATP synthase beta subunit [Agastachys odorata]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|62184044|gb|AAX73333.1| ATP synthase beta subunit [Banksia ericifolia]
 gi|62184046|gb|AAX73334.1| ATP synthase beta subunit [Banksia brownii]
 gi|62184052|gb|AAX73337.1| ATP synthase beta subunit [Banksia nutans]
 gi|62184056|gb|AAX73339.1| ATP synthase beta subunit [Banksia pulchella]
 gi|62184074|gb|AAX73348.1| ATP synthase beta subunit [Musgravea heterophylla]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62184080|gb|AAX73351.1| ATP synthase beta subunit [Macadamia integrifolia]
 gi|194267360|gb|ACF35666.1| ATP synthase beta subunit [Heliciopsis lanceolata]
 gi|194267362|gb|ACF35667.1| ATP synthase beta subunit [Hicksbeachia pinnatifolia]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|57868938|gb|AAW57465.1| ATP synthase beta subunit [Acanthogilia gloriosa]
          Length = 494

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKES 216

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 217 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 276

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 334

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 335 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 394

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 395 YKELQDIIAILG 406


>gi|304440602|ref|ZP_07400486.1| V-type ATP synthase, subunit B [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304370789|gb|EFM24411.1| V-type ATP synthase, subunit B [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 172/360 (47%), Gaps = 21/360 (5%)

Query: 53  GKNSDNLGQVIRINLDIVYICPVG--IGEEISLGDLVFHWGRFRISPSACWCGRVINALG 110
           GK S  +G V++++ D   I   G  +G      ++ F    F I  +    GRV + LG
Sbjct: 37  GKKS-MVGTVVKVDEDKATIQVFGDLLGSSTKNMEVTFEARPFEIPLTDEVLGRVFDGLG 95

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID    +   D    +  +    + R       +TGI  ID    L  GQ++ +F+GS
Sbjct: 96  RPIDKGGEI-YADKFYNVNGRPINPVARLYPRNFIQTGISAIDALMTLIRGQKLPIFSGS 154

Query: 171 GIGKSTLLSMFARS---------DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
           G+  + L +   R          D F  ++ + +G +  E   F E++    + ++VV+ 
Sbjct: 155 GLPHNELAAQIVRQAKISNASGEDNF-AIVFAAIGVKHDEADYFREEFNNAGVSENVVMY 213

Query: 222 ATSDESPILRKM-APLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVA 279
               + PI+ ++  P  A+T AEY + +   +VL+I+  IT +  ++RE++++  E+P  
Sbjct: 214 VNYADDPIMERLIVPKCALTCAEYLAYECNKHVLVIMTDITSYGEALREVSSSREEVPSR 273

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP  ++S+L  L ER G  +   G++T +  + +  D+   PI D    I +G IVL+
Sbjct: 274 KGYPGHLYSDLAMLYERAGMIKGIDGSVTLIPILTMPNDDITHPIPDLTGYITEGQIVLS 333

Query: 340 RSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           R L   G YPP++ L S+SRL      +     D   L S L     + +E R +  I G
Sbjct: 334 RDLHGSGIYPPINVLPSLSRLMKDGIGEGYTREDHADLSSQLFASYSKVQEVRALSQIIG 393


>gi|215259815|gb|ACJ64399.1| ATP synthase beta subunit [Culex tarsalis]
          Length = 305

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 142/266 (53%), Gaps = 16/266 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            RI   A   GR+IN +G+PID    + + +LS  I ++ P  +     ++   TGI+V+
Sbjct: 42  IRIPVGAETLGRIINIIGEPIDERGPI-ETNLSAPIHAEAPAFVEMSVEQEILVTGIKVV 100

Query: 153 DIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VRE 204
           D+  P   G +IG+F G+G+GK+     L++  A++     V    VGER RE      E
Sbjct: 101 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 159

Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260
            IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I 
Sbjct: 160 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 219

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+ 
Sbjct: 220 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 277

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEG 346
            DP   +  + LD   VL+R++AE G
Sbjct: 278 TDPAPATTFAHLDATTVLSRAIAELG 303


>gi|157689154|gb|ABV65133.1| ATP synthase CF1 beta subunit [Ficus sp. Moore 315]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361772|gb|ABN09328.1| ATP synthase beta subunit [Euclea crispa]
 gi|124361774|gb|ABN09329.1| ATP synthase beta subunit [Euclea divinorum]
 gi|124361776|gb|ABN09330.1| ATP synthase beta subunit [Euclea natalensis]
 gi|124361792|gb|ABN09338.1| ATP synthase beta subunit [Royena glabra]
 gi|124361794|gb|ABN09339.1| ATP synthase beta subunit [Royena lucida]
 gi|124361796|gb|ABN09340.1| ATP synthase beta subunit [Royena lycioides]
 gi|221078809|gb|ACL99479.1| ATP synthase beta subunit [Euclea undulata]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|61968199|gb|AAX57026.1| ATP synthase beta subunit [Actephila lindleyi]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYDTAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|14718216|gb|AAK72846.1| ATP synthase beta subunit [Scoliopus hallii]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|4206576|gb|AAD11719.1| ATP synthase beta subunit [Calodendrum capense]
          Length = 476

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|3929533|gb|AAC79944.1| ATP synthase beta subunit [Zanthoxylum monophyllum]
          Length = 413

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 79  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAP 135

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 196 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 255

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 256 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 313

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 314 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 373

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 374 ELQDIIAILG 383


>gi|62184040|gb|AAX73331.1| ATP synthase beta subunit [Banksia grandis]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|326909400|ref|YP_004327669.1| ATP synthase CF1 beta subunit [Hevea brasiliensis]
 gi|308523514|gb|ADO33564.1| ATP synthase CF1 beta subunit [Hevea brasiliensis]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|323715456|gb|ADY04796.1| ATP synthase beta subunit [Hydrostachys goudotiana]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINENNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|218931460|gb|ACL12359.1| ATP synthase beta subunit [Myosotidium hortensia]
          Length = 473

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|221078695|gb|ACL99422.1| ATP synthase beta subunit [Diospyros calciphila]
 gi|221078697|gb|ACL99423.1| ATP synthase beta subunit [Diospyros cherrieri]
 gi|221078699|gb|ACL99424.1| ATP synthase beta subunit [Diospyros cherrieri]
 gi|221078711|gb|ACL99430.1| ATP synthase beta subunit [Diospyros flavocarpa]
 gi|221078713|gb|ACL99431.1| ATP synthase beta subunit [Diospyros flavocarpa]
 gi|221078717|gb|ACL99433.1| ATP synthase beta subunit [Diospyros labillardierei]
 gi|221078719|gb|ACL99434.1| ATP synthase beta subunit [Diospyros labillardierei]
 gi|221078723|gb|ACL99436.1| ATP synthase beta subunit [Diospyros minimifolia]
 gi|221078725|gb|ACL99437.1| ATP synthase beta subunit [Diospyros minimifolia]
 gi|221078735|gb|ACL99442.1| ATP synthase beta subunit [Diospyros pancheri]
 gi|221078737|gb|ACL99443.1| ATP synthase beta subunit [Diospyros pancheri]
 gi|221078739|gb|ACL99444.1| ATP synthase beta subunit [Diospyros parviflora]
 gi|221078741|gb|ACL99445.1| ATP synthase beta subunit [Diospyros parviflora]
 gi|221078743|gb|ACL99446.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078745|gb|ACL99447.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078747|gb|ACL99448.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078749|gb|ACL99449.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078751|gb|ACL99450.1| ATP synthase beta subunit [Diospyros revolutissima]
 gi|221078753|gb|ACL99451.1| ATP synthase beta subunit [Diospyros revolutissima]
 gi|221078777|gb|ACL99463.1| ATP synthase beta subunit [Diospyros umbrosa]
 gi|221078779|gb|ACL99464.1| ATP synthase beta subunit [Diospyros umbrosa]
 gi|221078783|gb|ACL99466.1| ATP synthase beta subunit [Diospyros veillonii]
 gi|221078799|gb|ACL99474.1| ATP synthase beta subunit [Diospyros yaouhensis]
 gi|221078801|gb|ACL99475.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
 gi|221078803|gb|ACL99476.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
 gi|221078805|gb|ACL99477.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
 gi|221078807|gb|ACL99478.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|194267358|gb|ACF35665.1| ATP synthase beta subunit [Malagasia alticola]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|184127853|gb|ACC67826.1| ATP synthase beta chain [Marattia laxa]
          Length = 399

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 162/310 (52%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 12  LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 69  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 127

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 128 NQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 187

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 188 SEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 245

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 246 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 304

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 305 ELQDIIAILG 314


>gi|157689168|gb|ABV65140.1| ATP synthase CF1 beta subunit [Staphylea colchica]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|118429179|gb|ABK91694.1| ATP synthase beta subunit [Azotobacter vinelandii]
          Length = 257

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 22  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTRE 81

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 82  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 141

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 142 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 199

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 200 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 241


>gi|124361710|gb|ABN09297.1| ATP synthase beta subunit [Diospyros montana]
 gi|124361730|gb|ABN09307.1| ATP synthase beta subunit [Diospyros rhombifolia]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|52082877|gb|AAU26019.1| ATPase beta subunit [Anemopsis californica]
          Length = 469

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDMGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|7708139|emb|CAB89935.1| ATP synthase beta subunit [Aextoxicon punctatum]
          Length = 488

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|4206586|gb|AAD11724.1| ATP synthase beta subunit [Aegle marmelos]
          Length = 477

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|3850946|gb|AAC72165.1| ATP synthase beta subunit [Banksia cuneata]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|289065096|ref|YP_003433982.1| ATP synthase CF1 beta subunit [Typha latifolia]
 gi|69214422|gb|AAZ03791.1| ATP synthase beta chain [Typha latifolia]
 gi|218175481|gb|ACK75682.1| ATP synthase beta subunit [Typha domingensis]
 gi|281371779|gb|ADA63706.1| ATP synthase CF1 beta subunit [Typha latifolia]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|65332616|gb|AAY42232.1| ATP synthase beta subunit [Anisophyllea sororia]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLATKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|124361722|gb|ABN09303.1| ATP synthase beta subunit [Diospyros pilosula]
          Length = 463

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361714|gb|ABN09299.1| ATP synthase beta subunit [Diospyros oblonga]
          Length = 458

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|119024936|gb|ABL59886.1| ATP synthase beta subunit [Chlainomonas kolii]
          Length = 366

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 157/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  K + ++ I    P  ++       F+TGI+V+D+  P
Sbjct: 19  ATLGRIFNVLGEPVD---NLGPVKAEGTLPIHRSAPAFVDLDTRLSIFETGIKVVDLLAP 75

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205
              G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +          
Sbjct: 76  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 135

Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +E  L D+  K  +V    +E P  R    LTA+T+AE+F      +VL  +D+I RF 
Sbjct: 136 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEFFRDFNKQDVLFFIDNIFRFV 193

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ SE+  L + I  +  + G+IT++ +V V  D+  DP
Sbjct: 194 QAGAEVSALLGRMPSAVGYQPTLASEMGVLQDAI--TSTKDGSITSIQAVYVPADDLTDP 251

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
                 S LD   VL+R LA +G YP V PL S S +  + +   EK   +   +   + 
Sbjct: 252 APAVTFSHLDATTVLSRDLASKGIYPAVSPLESTSTML-QPFIVGEKHYNVAQDVKKTLQ 310

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 311 RYKELQDIIAILG 323


>gi|75336483|sp|Q9MRV8|ATPB_ARIMA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687956|emb|CAB89699.1| ATP synthase beta subunit [Aristolochia macrophylla]
 gi|33327739|gb|AAQ09233.1| ATP synthase beta subunit [Aristolochia macrophylla]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20269444|gb|AAM17949.1| ATP synthase beta subunit [Camellia sinensis]
          Length = 394

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 63  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 119

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 120 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 179

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 180 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 239

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 240 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 297

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 298 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 357

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 358 ELQDIIAILG 367


>gi|24940258|emb|CAD43387.1| ATP synthase beta subunit [Pentaglottis sempervirens]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|220932773|ref|YP_002509681.1| V-type ATP synthase subunit B [Halothermothrix orenii H 168]
 gi|254764988|sp|B8CZG7|VATB_HALOH RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|219994083|gb|ACL70686.1| V-type ATP synthase subunit B [Halothermothrix orenii H 168]
          Length = 463

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 9/274 (3%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I+ S    GRV N +G+PIDG   +   +    I        +RQ      +TG+  ID 
Sbjct: 80  IALSRDILGRVFNGVGEPIDGGGEV-YSNKKYNINGNAINPYSRQYPRNYIQTGVSAIDG 138

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS-----DCFD-KVIISLVGERGREVREFIED 208
              L  GQ++ +F+G+G+  + L +  AR      D  D  V+   +G +  +   FI  
Sbjct: 139 LITLIRGQKLPIFSGNGLPHNQLAAQIARQARLGDDNEDFAVVFVAMGIKHDDANFFINS 198

Query: 209 YLGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +    + ++VVV +  +D+  + R +AP   +T AEY +  +G ++L+I+  +T +  ++
Sbjct: 199 FEKSGVLQNVVVFLNLADDPAVERIIAPRIGLTAAEYLAFEEGMHILVIMTDMTNYCEAL 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE+++   E+P  +GYP  ++S+L  L ER G  + E+G+IT +  + +  D+   P+ D
Sbjct: 259 RELSSRREEVPSRKGYPGYLYSDLASLYERAGMIKGERGSITQLPILTMPNDDITHPVPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               I +G IVL R L + G YPP++ L S+SRL
Sbjct: 319 LTGYITEGQIVLKRDLYQRGVYPPINILPSLSRL 352


>gi|323715496|gb|ADY04816.1| ATP synthase beta subunit [Caiophora lateritia]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|305671661|gb|ADM63140.1| ATP synthase beta subunit [Diervilla sessilifolia]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN 213
           P   G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++     
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFGGVGERTREGNDLYKEMKESG 212

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKGGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGKKHYQTAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|170178359|gb|ACB10599.1| ATP synthase beta subunit [Cornus canadensis]
          Length = 455

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 183 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 360

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 361 ELQDIIAILG 370


>gi|118429175|gb|ABK91692.1| ATP synthase beta subunit [Azotobacter chroococcum]
 gi|118429177|gb|ABK91693.1| ATP synthase beta subunit [Azotobacter chroococcum]
          Length = 257

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 22  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTRE 81

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 82  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 141

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 142 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 199

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 200 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 241


>gi|124361644|gb|ABN09264.1| ATP synthase beta subunit [Diospyros curranii]
          Length = 464

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361736|gb|ABN09310.1| ATP synthase beta subunit [Diospyros ropourea]
          Length = 459

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|119350537|gb|ABL63219.1| AtpB [Pseudobohlinia americana]
          Length = 390

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + +  + I    P  ++       F+TGI+V+D+  P   
Sbjct: 36  GRIFNVLGEPVD---NLGPVEATEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 92

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +  
Sbjct: 93  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESGVIN 151

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 152 EKNLIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 211

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 212 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 269

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   ++   + R++E
Sbjct: 270 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKQTLQRYKE 328

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 329 LQDIIAILG 337


>gi|119367984|dbj|BAF40474.1| ATP synthase beta subunit [Euphorbia humifusa]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPID---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|38531948|gb|AAR23266.1| atpB [Peridiscus lucidus]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|15425564|emb|CAC60246.1| ATP synthase beta subunit [Crispiloba disperma]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6467949|gb|AAF13248.1|AF197615_1 ATPase beta subunit [Persoonia katerae]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|20269402|gb|AAM17928.1| ATP synthase beta subunit [Clethra arborea]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|24940262|emb|CAD43389.1| ATP synthase beta subunit [Saccellium lanceolatum]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|17224747|gb|AAL37095.1| ATP synthase beta subunit [Trichopus sempervirens]
          Length = 476

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 87  ATLGRIFNVLGEPVD---NLGPADTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 143

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 144 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 203

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 204 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 263

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 322 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 381

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 382 ELQDIIAILG 391


>gi|6687625|emb|CAB65027.1| ATP synthase beta subunit [Griselinia littoralis]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718068|gb|AAK72775.1| ATP synthase beta subunit [Griselinia lucida]
          Length = 495

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|3850936|gb|AAC72160.1| ATP synthase beta subunit [Sphalmium racemosum]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850968|gb|AAC72176.1| ATP synthase beta subunit [Gevuina bleasdalei]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|457413|emb|CAA40489.1| ATPase beta-subunit [Blastopirellula marina DSM 3645]
          Length = 364

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 148/270 (54%), Gaps = 15/270 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N LG+ IDG   +   D  + I    PP        + F+TGI+VID+ TP   G 
Sbjct: 98  GRVFNVLGETIDGRGPIEADDF-LPIHRSSPPVSELSTSTEVFETGIKVIDLLTPFVRGG 156

Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213
           + G+F G+G+GK+ +L+ + AR  S      + + VGER RE      E  +  +G    
Sbjct: 157 KAGLFGGAGLGKTVILTELIARIASAHGGYSVFAGVGERTREGTDLWLEMQDTEIGQTGR 216

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
             ++++ +V    +E P  R    L+A+T+AEYF  + G + LL +D+I RF+ +  E++
Sbjct: 217 KVIEQTCMVFGQMNEPPGARLRVALSALTMAEYFRDATGADTLLFIDNIFRFSQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G IT+V +V V  D+  DP   +   
Sbjct: 277 ALLGRMPSAVGYQPTLATEMGGLQERI--ASTKSGAITSVQAVYVPADDPTDPAPATAFG 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            LD  I L RS++E+G YP VDPLAS SR+
Sbjct: 335 QLDAFIYLERSISEKGIYPAVDPLASSSRI 364


>gi|305671703|gb|ADM63161.1| ATP synthase beta subunit [Sinadoxa corydalifolia]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E    + +    + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQMVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|221078811|gb|ACL99480.1| ATP synthase beta subunit [Maba tropophylla]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|260587102|ref|ZP_05853015.1| V-type sodium ATPase, B subunit [Blautia hansenii DSM 20583]
 gi|260542592|gb|EEX23161.1| V-type sodium ATPase, B subunit [Blautia hansenii DSM 20583]
          Length = 461

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 161/329 (48%), Gaps = 22/329 (6%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +F V  G  S  LG+++ I  +   I      E +SL +    L  H     +SP     
Sbjct: 31  EFRVDDG--SKKLGRIVEIYEEKAVIQVFEGTENMSLSNTHTRLSGHPMEVELSPD--IL 86

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N +GKPIDG   LG    ++ + I       + R+      +TGI  ID  T L  
Sbjct: 87  GRTFNGIGKPIDG---LGPVIPEMKLNINGLPLNPVTREYPRNFIQTGISAIDGLTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+G+G+    L        S+ + SD    ++ + +G +      F   +    
Sbjct: 144 GQKLPIFSGNGLPHDQLAAQIVQQASLGSNSDEKFAIVFAAMGVKYDVAEFFRRTFEESG 203

Query: 214 LKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271
           +   VV+       P++ ++  P  A+T AEY +  KG ++L+IL  IT F  ++RE+++
Sbjct: 204 VSDHVVMYLNLANDPVVERLITPKVALTAAEYLAFEKGMHILVILTDITSFCEAMREVSS 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE+P  +GYP  ++SEL  L ER G      G++T +  + +  D+   PI D    I
Sbjct: 264 SKGEIPSRKGYPGYLYSELATLYERAGIVRGGTGSVTQIPILTMPNDDITHPIPDLTGYI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +G IVL+R L  +  YPP++ L S+SRL
Sbjct: 324 TEGQIVLDRQLHGQAIYPPINVLPSLSRL 352


>gi|118429167|gb|ABK91688.1| ATP synthase beta subunit [Azorhizophilus paspali]
          Length = 257

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 22  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTRE 81

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 82  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 141

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 142 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 199

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 200 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 241


>gi|124361750|gb|ABN09317.1| ATP synthase beta subunit [Diospyros venosa]
          Length = 444

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 73  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 129

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 130 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 189

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 190 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 249

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 250 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 307

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 308 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 367

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 368 KELQDIIAILG 378


>gi|124361670|gb|ABN09277.1| ATP synthase beta subunit [Diospyros fulvopilosa]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|7708304|emb|CAB90081.1| ATP synthase beta subunit [Frankenia pulverulenta]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 40  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|9799472|gb|AAF98986.1| ATP synthase beta subunit [Mytilaria laosensis]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|14718042|gb|AAK72762.1| ATP synthase beta subunit [Chamerion angustifolium]
          Length = 475

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 154/314 (49%), Gaps = 20/314 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D    LG  D   +  I    P  +        F+TG
Sbjct: 81  GPLSVPVGGATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETG 137

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 138 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 197

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
           Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +
Sbjct: 198 YMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 257

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 258 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVP 315

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    
Sbjct: 316 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDDHYETAQR 375

Query: 376 LTHLIHRFEETRDI 389
           +   + R++E +DI
Sbjct: 376 VKETLQRYKELQDI 389


>gi|24940270|emb|CAD43391.1| ATP synthase beta subunit [Wigandia caracasana]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|24940256|emb|CAD43386.1| ATP synthase beta subunit [Patagonula americana]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708680|emb|CAB90013.1| ATP synthase beta subunit [Tofieldia calyculata]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|24940186|emb|CAD43375.1| ATP synthase beta subunit [Heliotropium lasiocarpum]
 gi|24940202|emb|CAD43402.2| ATP synthase beta subunit [Heliotropium messerschmidioides]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|58081518|gb|AAW65234.1| AtpB [Symphyogyna brongniartii]
          Length = 382

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            G  +N LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P   G
Sbjct: 2   SGEFLNVLGEPVDNLGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRG 60

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +
Sbjct: 61  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEE 120

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 121 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 180

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 181 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 238

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 297

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 298 DIIAILG 304


>gi|3850962|gb|AAC72173.1| ATP synthase beta subunit [Panopsis ferruginea]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850974|gb|AAC72179.1| ATP synthase beta subunit [Telopea sp. Weston s.n.]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|194267350|gb|ACF35661.1| ATP synthase beta subunit [Turrillia lutea]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156530171|gb|ABU75182.1| AtpB [Samadera baileyana]
          Length = 459

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|124361632|gb|ABN09258.1| ATP synthase beta subunit [Diospyros cayennensis]
          Length = 454

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361686|gb|ABN09285.1| ATP synthase beta subunit [Diospyros longifolia]
          Length = 459

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|37721021|gb|AAN32513.1| ATP synthase beta subunit [Muilla maritima]
          Length = 494

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|33318655|gb|AAQ05211.1| ATP synthase beta subunit [Bowenia serrulata]
          Length = 484

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 210 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 386

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 387 RYKELQDIIAILG 399


>gi|24940182|emb|CAD43373.1| ATP synthase beta subunit [Ehretia cymosa]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|4995103|emb|CAB44006.1| H(+)-transporting ATP synthase [Cola nitida]
          Length = 485

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TFTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|20269448|gb|AAM17951.1| ATP synthase beta subunit [Sladenia celastrifolia]
          Length = 437

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 51  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 107

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 108 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 167

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 168 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 227

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 228 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 285

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 286 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 345

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 346 KELQDIIAILG 356


>gi|75338776|sp|Q9XQX2|ATPB_TROAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5031147|gb|AAD38084.1|AF093423_1 ATP synthase beta subunit [Trochodendron aralioides]
 gi|157689170|gb|ABV65141.1| ATP synthase CF1 beta subunit [Trochodendron aralioides]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|3850938|gb|AAC72161.1| ATP synthase beta subunit [Knightia excelsa]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|305671653|gb|ADM63136.1| ATP synthase beta subunit [Schefflera delavayi]
 gi|305671675|gb|ADM63147.1| ATP synthase beta subunit [Tetrapanax papyrifer]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|284162743|ref|YP_003401366.1| ATP synthase subunit beta [Archaeoglobus profundus DSM 5631]
 gi|284012740|gb|ADB58693.1| ATP synthase, B subunit [Archaeoglobus profundus DSM 5631]
          Length = 468

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 146/275 (53%), Gaps = 9/275 (3%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +++ S    GR+++  G+PIDG   +   +    I + + P   RQ   +  +TGI  ID
Sbjct: 77  KLNCSKDMLGRILSGSGEPIDGGPKIVPEERRPIIGAAINP-YARQYPREFIQTGISAID 135

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIE 207
               L  GQ++ +F+GSG+  + +    AR            ++ + +G    E  +F++
Sbjct: 136 GMNTLVRGQKLPIFSGSGLPHNDIALQIARQAKVRGQEEEFAIVFAAMGITYEEAHQFMK 195

Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           ++     L+++VV +  + +  I R + P  A+T AE+ + + D ++L+IL  +T +  +
Sbjct: 196 EFERTGALERAVVFLNLASDPAIERLITPRMALTAAEFLAYEYDYHILVILTDMTNYCEA 255

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI+    E+P  RGYP  ++++L  + ER G     KG IT +  + + GD+   PI 
Sbjct: 256 LREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMPILTMPGDDITHPIP 315

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 316 DLTGYITEGQIVLSRELHAKGIYPPIDVLPSLSRL 350


>gi|194267383|gb|ACF35677.1| ATP synthase beta subunit [Panopsis cinnamomea]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|194267356|gb|ACF35664.1| ATP synthase beta subunit [Gevuina avellana]
          Length = 492

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361610|gb|ABN09247.1| ATP synthase beta subunit [Diospyros artanthifolia]
 gi|124361616|gb|ABN09250.1| ATP synthase beta subunit [Diospyros bejaudii]
 gi|124361630|gb|ABN09257.1| ATP synthase beta subunit [Diospyros cavalcantei]
 gi|124361634|gb|ABN09259.1| ATP synthase beta subunit [Diospyros celebica]
 gi|124361648|gb|ABN09266.1| ATP synthase beta subunit [Diospyros dichroa]
 gi|124361662|gb|ABN09273.1| ATP synthase beta subunit [Diospyros ferruginescens var.
           ferruginescens]
 gi|124361668|gb|ABN09276.1| ATP synthase beta subunit [Diospyros fragrans]
 gi|124361704|gb|ABN09294.1| ATP synthase beta subunit [Diospyros mespiliformis]
 gi|124361732|gb|ABN09308.1| ATP synthase beta subunit [Diospyros ridleyi]
 gi|221078765|gb|ACL99457.1| ATP synthase beta subunit [Diospyros scalariformis]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361784|gb|ABN09334.1| ATP synthase beta subunit [Lissocarpa ronliesneri]
          Length = 455

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|75328430|sp|Q85V27|ATPB_BRIAM RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351931|emb|CAD48413.1| ATP synthase beta subunit [Brimeura amethystina]
          Length = 495

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|3850924|gb|AAC72154.1| ATP synthase beta subunit [Beauprea montana]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62184042|gb|AAX73332.1| ATP synthase beta subunit [Banksia oblongifolia]
          Length = 494

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|57868952|gb|AAW57472.1| ATP synthase beta subunit [Camellia sinensis]
          Length = 494

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|37729416|gb|AAN71674.1| ATP synthase beta subunit [Rhoiptelea chiliantha]
          Length = 472

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYPRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|305671669|gb|ADM63144.1| ATP synthase beta subunit [Arctopus dregei]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|221078687|gb|ACL99418.1| ATP synthase beta subunit [Diospyros apiculata]
          Length = 462

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361734|gb|ABN09309.1| ATP synthase beta subunit [Diospyros rigida]
          Length = 464

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|56682985|gb|AAW21824.1| ATP synthase beta subunit [Macrozamia moorei]
          Length = 424

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 149

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 150 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 268 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 326

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 327 RYKELQDIIAILG 339


>gi|56675874|emb|CAD43385.2| ATP synthase beta subunit [Pardoglossum cheirifolium]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|8452663|emb|CAB90091.2| ATP synthase beta subunit [Loeseneriella barbata]
          Length = 484

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +D+  I G
Sbjct: 387 KELQDLIAILG 397


>gi|14718242|gb|AAK72859.1| ATP synthase beta subunit [Tapiscia sinensis]
          Length = 472

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|4995105|emb|CAB44014.1| H(+)-transporting ATP synthase [Dombeya sp. Chase 273]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  EI+   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEISALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|21633375|gb|AAM52162.1| ATP synthase beta subunit [Bonamia spectabilis]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGAPVD---NLGAVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|7708444|emb|CAB89911.1| ATP synthase beta subunit [Ilex crenata]
          Length = 485

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|9799476|gb|AAF98988.1| ATP synthase beta subunit [Aphanopetalum resinosum]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|6687377|emb|CAB64943.1| ATP synthase beta subunit [Delarbrea michieana]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718244|gb|AAK72860.1| ATP synthase beta subunit [Terminalia catappa]
          Length = 481

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|4206594|gb|AAD11728.1| ATP synthase beta subunit [Zanthoxylum sp. Chase 1348]
          Length = 471

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYXEMKES 199

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 200 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 259

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 260 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 317

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 318 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 377

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 378 YKELQDIIAILG 389


>gi|62184070|gb|AAX73346.1| ATP synthase beta subunit [Banksia bipinnatifida]
 gi|62184072|gb|AAX73347.1| ATP synthase beta subunit [Banksia falcata]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|57868942|gb|AAW57467.1| ATP synthase beta subunit [Palaquium ferox]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|11467034|ref|NP_041941.1| ATP synthase CF1 beta subunit [Euglena gracilis]
 gi|399080|sp|P31476|ATPB_EUGGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|415784|emb|CAA50128.1| ATP Synthase, beta subunit [Euglena gracilis]
          Length = 480

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+ +D    +G  D S+ + + +  P+      +   F+TGI+V+D+  P  
Sbjct: 96  LGRIFNVLGESVD---KMGLIDYSITLPIHRAAPSFVELDTQLSIFETGIKVVDLLAPYR 152

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDY-----LG 211
            G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++      + 
Sbjct: 153 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYQEMKESGVIN 212

Query: 212 D-NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
           D N K+S V  +    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 213 DRNFKESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 272

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 273 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKVGSITSIQAVYVPADDLTDPAPAT 330

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R+LA +G YP VDPL S S +  + W   E+      S+   + R++E
Sbjct: 331 TFAHLDATTVLSRNLASKGIYPAVDPLDSTSTML-QPWIVGEEHYNTAQSVKKTLQRYKE 389

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 390 LQDIIAILG 398


>gi|323715498|gb|ADY04817.1| ATP synthase beta subunit [Caiophora cirsiifolia]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|149798691|gb|ABR32036.1| ATP synthase beta chain [Haplopteris elongata]
          Length = 426

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|124361636|gb|ABN09260.1| ATP synthase beta subunit [Diospyros confertiflora]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 87  LGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 144 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 203

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 204 EQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 263

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 264 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 321

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 322 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKEL 381

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 382 QDIIAILG 389


>gi|20269416|gb|AAM17935.1| ATP synthase beta subunit [Halesia carolina]
          Length = 471

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEXAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|7708317|emb|CAB90085.1| ATP synthase beta subunit [Gonocaryum litorale]
 gi|11558458|emb|CAC17758.1| ATP synthase subunit B [Gonocaryum litorale]
          Length = 485

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7688419|emb|CAB89736.1| ATP synthase beta subunit [Viburnum opulus]
          Length = 492

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PXRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|24940168|emb|CAD43368.1| ATP synthase beta subunit [Cordia macrostachya]
          Length = 476

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14327833|gb|AAF98987.2| ATP synthase beta subunit [Rhodoleia championii]
          Length = 478

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|7708211|emb|CAB90049.1| ATP synthase beta subunit [Coriaria myrtifolia]
          Length = 494

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIXRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++  V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQXVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|5001567|gb|AAD37030.1|AF092104_1 ATP synthase beta subunit [Liquidambar styraciflua]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62085204|gb|AAX63006.1| ATP synthase beta subunit [Trigonostemon verrucosus]
          Length = 482

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 206

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 207 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 384

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 385 ELQDIIAILG 394


>gi|290490154|gb|ADD31484.1| ATP synthase CF1 beta subunit protein [Meliosma aff. cuneifolia
           Moore 333]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|221078767|gb|ACL99458.1| ATP synthase beta subunit [Diospyros senensis]
 gi|221078769|gb|ACL99459.1| ATP synthase beta subunit [Diospyros squarrosa]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|221078763|gb|ACL99456.1| ATP synthase beta subunit [Diospyros sandwicensis]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|123325663|gb|ABM74456.1| ATP synthase beta subunit [Flindersia australis]
          Length = 466

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|156530167|gb|ABU75180.1| AtpB [Quassia africana]
          Length = 495

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NFGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|124361778|gb|ABN09331.1| ATP synthase beta subunit [Lissocarpa benthamii]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361742|gb|ABN09313.1| ATP synthase beta subunit [Diospyros tetrandra]
          Length = 453

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|56682983|gb|AAW21823.1| ATP synthase beta subunit [Lepidozamia hopei]
          Length = 424

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 149

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 150 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 268 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 326

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 327 RYKELQDIIAILG 339


>gi|113910934|gb|ABI48199.1| ATPase beta subunit [Ceratopteris sp. Qiu 97119]
          Length = 450

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +      I    P           F+TGI+V+D+  P  
Sbjct: 62  LGRISNVLGEPVD---NLGPVQNSTKFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYR 118

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 119 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 178

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 179 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 238

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 239 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 296

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 297 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 355

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 356 LQDIIAILG 364


>gi|99640676|emb|CAJ45106.1| putative beta subunit of chloroplast ATP synthase [Marsilea mutica]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|7708656|emb|CAB90003.1| ATP synthase beta subunit [Stachyurus praecox]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708522|emb|CAB89944.1| ATP synthase beta subunit [Nyssa sylvatica]
          Length = 463

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 71  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 127

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 128 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 187

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 188 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 247

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 248 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 305

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 306 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 365

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 366 ELQDIIAILG 375


>gi|4995788|emb|CAB44264.1| H(+)-transporting ATP synthase [Rhopalocarpus sp. Chase 906]
          Length = 488

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NFGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|6017796|gb|AAF01632.1| ATP synthase beta subunit [Disanthus cercidifolius]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|49617846|gb|AAT67604.1| ATP synthase CF1 beta subunit B [Hesperocallis undulata]
          Length = 463

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|323715454|gb|ADY04795.1| ATP synthase beta subunit [Hydrostachys polymorpha]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINENNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|224830588|gb|ACN66389.1| ATP synthase beta chain [Tiliacora funifera]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 172/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 44  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 219

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF   K  +VLL +D I RF  +  E+
Sbjct: 220 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVKEQDVLLFIDHIFRFVQAGSEV 279

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 280 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 337

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +D
Sbjct: 338 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQD 397

Query: 389 IRLIGG 394
           I  I G
Sbjct: 398 IIAILG 403


>gi|124361726|gb|ABN09305.1| ATP synthase beta subunit [Diospyros pubicalyx]
          Length = 455

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361754|gb|ABN09319.1| ATP synthase beta subunit [Diospyros virginiana]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124027661|ref|YP_001012981.1| V-type ATP synthase subunit B [Hyperthermus butylicus DSM 5456]
 gi|171769544|sp|A2BKX5|VATB_HYPBU RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|123978355|gb|ABM80636.1| V-type ATP synthase beta chain [Hyperthermus butylicus DSM 5456]
          Length = 476

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 148/290 (51%), Gaps = 19/290 (6%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG---DLSMEIMSKVPPAMNRQ 139
           G  V   GR   I  S    GRV N LG PIDG   +  G   D++ E ++   PA  R 
Sbjct: 76  GTKVRFLGRTLEIKVSDEMLGRVFNGLGDPIDGGPPITSGVRRDINGEPLN---PAA-RA 131

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----VIISL 194
             E   +TGI  ID    +  GQ++ +F+GSG+  + L    AR           V+ + 
Sbjct: 132 YPEDFIQTGISAIDGMNTMVRGQKLPIFSGSGLPHNKLAVQIARQATVRSGEEFAVVFAA 191

Query: 195 VGERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGD 250
           +G    E    + F E+     +K++ + +  +DE   +R + P  A+T+AE+ +   G 
Sbjct: 192 IGVMYDEAIFFKRFFEET--GAIKRAALFINLADEPASVRLITPRVALTLAEHLAFDLGM 249

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL+IL  +T +  ++REI+    E+P  +GYP  ++S+L  + ER G +   KG+IT +
Sbjct: 250 HVLVILTDMTNYCEALREISAAREEVPGRQGYPGYMYSDLASIYERAGRAHGRKGSITQM 309

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + +  D+   PI D    I +G IVL+R L   G YPP++ L S+SRL
Sbjct: 310 PILTMPNDDITHPIPDLTGYITEGQIVLSRELHNRGIYPPINVLMSLSRL 359


>gi|37720991|gb|AAN32498.1| ATP synthase beta subunit [Hemerocallis littorea]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|30351865|emb|CAD48085.1| ATP synthase beta subunit [Oziroe acaulis]
          Length = 457

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 66  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 122

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 123 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 182

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 183 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|30351911|emb|CAD48108.1| ATP synthase beta subunit [Massonia depressa]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708143|emb|CAB89948.1| ATP synthase beta subunit [Alangium sp. Chase 2541]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708290|emb|CAB90073.1| ATP synthase beta subunit [Euphorbia polychroma]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GTTLGRIFNVLGEPID---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|3850980|gb|AAC72182.1| ATP synthase beta subunit [Lomatia myricoides]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850964|gb|AAC72174.1| ATP synthase beta subunit [Cardwellia sublimis]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|62184036|gb|AAX73329.1| ATP synthase beta subunit [Banksia media]
          Length = 485

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|305671619|gb|ADM63119.1| ATP synthase beta subunit [Cussonia spicata]
          Length = 477

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|291542855|emb|CBL15965.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus bromii
           L2-63]
          Length = 459

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 163/310 (52%), Gaps = 27/310 (8%)

Query: 86  LVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVE 142
           L  H     +SP     GRV++  GKPIDG   +    K +++   ++ V    +R   +
Sbjct: 72  LTGHPMEMPLSPE--IIGRVLDGAGKPIDGLGDIFPVKKANINGTPINPV----SRVYPK 125

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--------SDCFDKVIISL 194
               TGI  ID    L  GQ++ +F+GSG+  + L     R        S  F  V+ + 
Sbjct: 126 NYINTGISTIDTLMTLIRGQKLPIFSGSGMKHNDLAVQIVRQAKISGANSSNFG-VVFAA 184

Query: 195 VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-N 251
           +G + ++V E+ +    ++  L + V+++  S++  I R + P  A+TIAEY + + D +
Sbjct: 185 MGVQ-KDVAEYFKKSFEESGVLSRVVMLLNLSNDPIIERTLTPRCALTIAEYLAFELDMH 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           +L+I+  +T +A ++RE +++ GE+P  +GYP  ++S+L  L ER G  +   G++T + 
Sbjct: 244 ILVIMTDMTSYAEALREFSSSKGEIPGRKGYPGYLYSDLASLYERAGMIKGHSGSVTQIP 303

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWS 366
            + +  D+   PI D    I +G IVL+RSL  +G YPPV+ L S+SRL      +    
Sbjct: 304 ILTMPNDDITHPIPDLTGYITEGQIVLDRSLQGQGLYPPVNVLPSLSRLMKDGIGEGYTR 363

Query: 367 ADEKKLVSSL 376
           AD + L + L
Sbjct: 364 ADHQPLANQL 373


>gi|30351919|emb|CAD48407.1| ATP synthase beta subunit [Nectaroscilla hyacinthoides]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708518|emb|CAB89942.1| ATP synthase beta subunit [Nepenthes alata]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|62184050|gb|AAX73336.1| ATP synthase beta subunit [Banksia dryandroides]
          Length = 497

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|197294097|ref|YP_002149718.1| ATP synthase CF1 beta subunit [Cicer arietinum]
 gi|197089785|gb|ACH41055.1| ATP synthase CF1 beta subunit [Cicer arietinum]
          Length = 491

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|155573945|dbj|BAF75568.1| ATP synthase beta subunit [Chamaesyce atoto]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  TTLGRIFNVLGEPID---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|155029349|dbj|BAF75558.1| ATP synthase beta subunit [Micrandra spruceana]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|124361646|gb|ABN09265.1| ATP synthase beta subunit [Diospyros dasyphylla]
 gi|124361650|gb|ABN09267.1| ATP synthase beta subunit [Diospyros diepenhorstii]
 gi|124361652|gb|ABN09268.1| ATP synthase beta subunit [Diospyros digyna]
 gi|124361664|gb|ABN09274.1| ATP synthase beta subunit [Diospyros filipendula]
 gi|124361680|gb|ABN09282.1| ATP synthase beta subunit [Diospyros insidiosa]
 gi|124361740|gb|ABN09312.1| ATP synthase beta subunit [Diospyros tahanensis]
 gi|221078693|gb|ACL99421.1| ATP synthase beta subunit [Diospyros buxifolia]
 gi|221078771|gb|ACL99460.1| ATP synthase beta subunit [Diospyros sumatrana]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361618|gb|ABN09251.1| ATP synthase beta subunit [Diospyros bipindensis]
 gi|124361640|gb|ABN09262.1| ATP synthase beta subunit [Diospyros cooperi]
 gi|124361660|gb|ABN09272.1| ATP synthase beta subunit [Diospyros ferrea]
 gi|124361676|gb|ABN09280.1| ATP synthase beta subunit [Diospyros gracilipes]
 gi|124361694|gb|ABN09289.1| ATP synthase beta subunit [Diospyros malabarica f. atrata]
 gi|124361696|gb|ABN09290.1| ATP synthase beta subunit [Diospyros malabarica f. malabarica]
 gi|124361702|gb|ABN09293.1| ATP synthase beta subunit [Diospyros melocarpa]
 gi|124361706|gb|ABN09295.1| ATP synthase beta subunit [Diospyros mindanaensis]
 gi|124361712|gb|ABN09298.1| ATP synthase beta subunit [Diospyros natalensis]
 gi|124361758|gb|ABN09321.1| ATP synthase beta subunit [Diospyros sp. FS1637]
 gi|124361760|gb|ABN09322.1| ATP synthase beta subunit [Diospyros sp. FS2217]
 gi|124361766|gb|ABN09325.1| ATP synthase beta subunit [Diospyros sp. K20616]
 gi|124361768|gb|ABN09326.1| ATP synthase beta subunit [Diospyros sp. RNF 970]
 gi|124361770|gb|ABN09327.1| ATP synthase beta subunit [Diospyros sp. W36]
 gi|124361788|gb|ABN09336.1| ATP synthase beta subunit [Maba myriophylla]
 gi|221078691|gb|ACL99420.1| ATP synthase beta subunit [Diospyros borbonica]
 gi|221078707|gb|ACL99428.1| ATP synthase beta subunit [Diospyros ferrea]
 gi|221078709|gb|ACL99429.1| ATP synthase beta subunit [Diospyros ferrea]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361720|gb|ABN09302.1| ATP synthase beta subunit [Diospyros philippinensis]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361678|gb|ABN09281.1| ATP synthase beta subunit [Diospyros guianensis]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361756|gb|ABN09320.1| ATP synthase beta subunit [Diospyros yatesiana]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|61968235|gb|AAX57044.1| ATP synthase beta subunit [Cleistanthus suarezensis]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 153/306 (50%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GSTLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDI 389
           +E +DI
Sbjct: 387 KELQDI 392


>gi|24940160|emb|CAD43364.1| ATP synthase beta subunit [Anchusa officinalis]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7688425|emb|CAB89739.1| ATP synthase beta subunit [Vitis aestivalis]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|6017818|gb|AAF01643.1| ATP synthase beta subunit [Paeonia suffruticosa]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|4206558|gb|AAD11710.1| ATP synthase beta subunit [Pilocarpus pennatifolius]
          Length = 444

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 66  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 122

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 123 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 182

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 183 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 301 PATTFAHLDATTVLSRELAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|219674018|ref|YP_002456502.1| ATP synthase CF1 beta subunit [Trifolium subterraneum]
 gi|193788987|gb|ACF20583.1| ATP synthase CF1 beta subunit [Trifolium subterraneum]
          Length = 492

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEKKIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYQTAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|149384405|gb|ABR25025.1| ATP synthase beta chain [Asplenium nidus]
          Length = 426

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 156/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|18077605|emb|CAD11919.1| ATP synthase beta subunit [Quintinia verdonii]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14717933|gb|AAK72709.1| ATP synthase beta subunit [Ancistrocladus korupensis]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|24940250|emb|CAD43383.1| ATP synthase beta subunit [Ogastemma pusillum]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|323715448|gb|ADY04792.1| ATP synthase beta subunit [Hydrostachys multifida]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|255009220|ref|ZP_05281346.1| F0F1 ATP synthase subunit beta [Bacteroides fragilis 3_1_12]
 gi|313146968|ref|ZP_07809161.1| ATP synthase F1 sector subunit beta [Bacteroides fragilis 3_1_12]
 gi|313135735|gb|EFR53095.1| ATP synthase F1 sector subunit beta [Bacteroides fragilis 3_1_12]
          Length = 505

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L + + +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELNR-EGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  K+S+                     +V    +E P  R    L+ +T+AE F   G
Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMG 269

Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D  
Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387

Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389
               E   V+  +  ++ R +E +DI
Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413


>gi|221078773|gb|ACL99461.1| ATP synthase beta subunit [Diospyros toposia]
          Length = 459

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|170178363|gb|ACB10601.1| ATP synthase beta subunit [Cornus unalaschkensis]
          Length = 455

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 66  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 122

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 182

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 183 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 242

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 360

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 361 ELQDIIAILG 370


>gi|156530097|gb|ABU75145.1| AtpB [Ailanthus altissima var. tanakai]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|149390547|ref|YP_001294191.1| ATP synthase CF1 beta subunit [Buxus microphylla]
 gi|190358266|sp|A6MM43|ATPB_BUXMI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|146762292|gb|ABQ45256.1| ATP synthase CF1 beta subunit [Buxus microphylla]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361698|gb|ABN09291.1| ATP synthase beta subunit [Diospyros mannii]
          Length = 453

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|30351937|emb|CAD48416.1| ATP synthase beta subunit [Scilla scilloides]
          Length = 495

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7688339|emb|CAB89742.1| ATP synthase beta subunit [Trigonobalanus verticillata]
 gi|14718050|gb|AAK72766.1| ATP synthase beta subunit [Trigonobalanus verticillata]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|14718011|gb|AAK72747.1| ATP synthase beta subunit [Clivia nobilis]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|32815651|gb|AAP88222.1| ATP synthase beta subunit [Juglans mandshurica]
          Length = 457

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|3850948|gb|AAC72166.1| ATP synthase beta subunit [Austromuellera trinervia]
 gi|3850970|gb|AAC72177.1| ATP synthase beta subunit [Helicia australasica]
 gi|3850972|gb|AAC72178.1| ATP synthase beta subunit [Hollandaea riparia]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850918|gb|AAC72151.1| ATP synthase beta subunit [Synaphea media]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|323715506|gb|ADY04821.1| ATP synthase beta subunit [Mentzelia dispersa]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|323715500|gb|ADY04818.1| ATP synthase beta subunit [Eucnide urens]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|221078785|gb|ACL99467.1| ATP synthase beta subunit [Diospyros venosa]
          Length = 459

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|239629131|ref|ZP_04672162.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519277|gb|EEQ59143.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 460

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 146/281 (51%), Gaps = 18/281 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
             I  S    GR  N +G+PIDG   LG    D+ ++I  K    + R+      +TGI 
Sbjct: 77  MEIEVSEEMLGRTFNGIGQPIDG---LGDIISDVKLDINGKPLNPVTREYPRNYIRTGIS 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGREVREFI 206
            ID  T L  GQ++ +F+G+G+    L +   +     D  D+    + G  G  V+  +
Sbjct: 134 AIDGLTTLIRGQKLPIFSGNGLPHDQLAAQIVQQASLGDNSDEKFAIVFGAMG--VKYDV 191

Query: 207 EDYLGDNLKKS------VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSI 259
            D+     ++S       + +  +++  + R + P  A+T+AEY +  KG ++L+IL  +
Sbjct: 192 ADFFRRTFEESGVSEHVAMFINLANDPVVERLITPKIALTLAEYLAFEKGMHILVILTDM 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           T +A ++RE++++ GE+P  +G+P  ++S+L  L ER G      G++T +  + +  D+
Sbjct: 252 TSYAEALREVSSSKGEIPSRKGFPGYLYSDLASLYERAGIVAGRPGSVTQIPILTMPNDD 311

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              PI D    I +G IVL+R L  +  YPP++ L S+SRL
Sbjct: 312 ITHPIPDLTGYITEGQIVLDRQLNGQSIYPPINVLPSLSRL 352


>gi|194267377|gb|ACF35674.1| ATP synthase beta subunit [Macadamia ternifolia]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|169597039|ref|XP_001791943.1| hypothetical protein SNOG_01298 [Phaeosphaeria nodorum SN15]
 gi|160707434|gb|EAT90947.2| hypothetical protein SNOG_01298 [Phaeosphaeria nodorum SN15]
          Length = 395

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 26/309 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR++N  G PID      +G +    M+ +   PP    Q    +   TGI+V+D+  P
Sbjct: 9   LGRIMNVTGDPIDE-----RGPIKATKMAAIHADPPEFTEQSTSAEVLVTGIKVVDLLAP 63

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211
              G +IG+F G+G+GK+     L++  A++     V    VGER RE  +  ++     
Sbjct: 64  YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYKEMQETS 122

Query: 212 ----DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
               D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R A S 
Sbjct: 123 VIQLDGDSKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRRAGS- 181

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++  ++  + ERI  +   KG+IT+V +V V  D+  DP   
Sbjct: 182 -EVSALLGRIPSAVGYQPTLAVDMGVMQERI--TTTSKGSITSVQAVYVPADDLTDPAPA 238

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R ++E G YP VDPL S SR+ D +    +     + +  ++  ++ 
Sbjct: 239 TTFAHLDATTVLSRGISELGIYPAVDPLDSKSRILDPRVIGQEHYDTATRVQQILQEYKS 298

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 299 LQDIIAILG 307


>gi|118573507|sp|Q85V24|ATPB_BARSC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351935|emb|CAD48415.1| ATP synthase beta subunit [Scilla scilloides]
          Length = 495

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708335|emb|CAB89909.1| ATP synthase beta subunit [Humulus lupulus]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|15422208|emb|CAC60323.1| ATP synthase beta subunit [Argophyllum sp. Telford 5462]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|5758855|gb|AAD50829.1| ATP synthase beta subunit [Aponogeton crispus]
          Length = 491

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|323715484|gb|ADY04810.1| ATP synthase beta subunit [Whipplea modesta]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|323166420|gb|EFZ52185.1| putative ATP synthase hrpB6 domain protein [Shigella sonnei 53G]
 gi|323181505|gb|EFZ66927.1| putative ATP synthase hrpB6 domain protein [Escherichia coli 1357]
          Length = 170

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 96/151 (63%), Gaps = 1/151 (0%)

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +A  +GE P  RGYP SVF  LPRLLER G   K  G+ITA  +VL++ D+  DP+A+ V
Sbjct: 1   MALAAGESPARRGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEV 59

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
           RSILDGHI L+R+LA++G++P +D L S+SR+  +      + + ++   L+   EE R 
Sbjct: 60  RSILDGHIYLSRNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRT 119

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           I   G Y+PG +   DK  +++ ++  FLKQ
Sbjct: 120 IIDFGEYKPGENASQDKIYNKISVVESFLKQ 150


>gi|305671687|gb|ADM63153.1| ATP synthase beta subunit [Myodocarpus fraxinifolius]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|221078787|gb|ACL99468.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078789|gb|ACL99469.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078791|gb|ACL99470.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078793|gb|ACL99471.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078795|gb|ACL99472.1| ATP synthase beta subunit [Diospyros vieillardii]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|194267366|gb|ACF35669.1| ATP synthase beta subunit [Athertonia diversifolia]
          Length = 491

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|194267354|gb|ACF35663.1| ATP synthase beta subunit [Bleasdalea bleasdalei]
 gi|194267375|gb|ACF35673.1| ATP synthase beta subunit [Macadamia tetraphylla]
          Length = 486

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361708|gb|ABN09296.1| ATP synthase beta subunit [Diospyros mollis]
          Length = 465

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|42559034|gb|AAS20203.1| ATP synthase beta subunit [Agapanthus africanus]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|99640391|emb|CAJ45068.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           bryophila]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|37720971|gb|AAN32488.1| ATP synthase beta subunit [Talbotia elegans]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|257853476|gb|ACV71740.1| ATP synthase beta subunit [Stawellia dimorphantha]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|124361608|gb|ABN09246.1| ATP synthase beta subunit [Diospyros andamanica]
          Length = 453

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|14717980|gb|AAK72732.1| ATP synthase beta subunit [Caiophora acuminata]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|14718248|gb|AAK72862.1| ATP synthase beta subunit [Tetracarpaea tasmanica]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|6687375|emb|CAB64930.1| ATP synthase beta subunit [Digitalis grandiflora]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVETRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14717956|gb|AAK72720.1| ATP synthase beta subunit [Batis maritima]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P  
Sbjct: 100 LGRIFNVLGEPVD---NLGPVDTRITSPIHKSAPAFIQLHTKLSIFETGIKVVDLLAPYR 156

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+ K+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 157 XGGKIGLFGGAGVCKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 216

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 217 EQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 276

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 277 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 334

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 335 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKEL 394

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 395 QDIIAILG 402


>gi|7708476|emb|CAB89925.1| ATP synthase beta subunit [Leea guineensis]
          Length = 491

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|14718199|gb|AAK72838.1| ATP synthase beta subunit [Quercus rubra]
          Length = 496

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|3850958|gb|AAC72171.1| ATP synthase beta subunit [Macadamia jansenii]
 gi|3850960|gb|AAC72172.1| ATP synthase beta subunit [Brabejum stellatifolium]
          Length = 490

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|301062830|ref|ZP_07203428.1| alternate F1F0 ATPase, F1 subunit beta [delta proteobacterium
           NaphS2]
 gi|300443092|gb|EFK07259.1| alternate F1F0 ATPase, F1 subunit beta [delta proteobacterium
           NaphS2]
          Length = 466

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 13/298 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPL 158
              GR+ N  G PIDG D     ++    + + P  + R+   E  F TGI+ ID+  PL
Sbjct: 93  ALLGRMFNVFGHPIDGMDM--PSEIDYRSIHQPPIELARRITTEDVFFTGIKAIDLLVPL 150

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-- 213
             G + G+F G+G+GK+ +++    +       +S+   +GER RE  E   + +G+   
Sbjct: 151 ERGGKAGLFGGAGVGKTVVITELIHNMVGKHKGMSIFCGIGERCREGEELHRE-MGEAGV 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272
           L  +V+V    +E P  R     TA+T+AEYF      +VLL++D+I RF  +  E++  
Sbjct: 210 LPNTVMVFGQMNEPPGARFRVGHTAMTMAEYFRDDLNQDVLLLIDNIFRFIQAGSELSGL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G LP   GY  ++ +EL  L ERI  S   +  IT++ +V V  D+  DP A      L
Sbjct: 270 LGRLPSRMGYQPTMATELAELEERI--SSTSEAAITSIQAVYVPADDLTDPSAVHTFGHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
              IVL+R  A EG YP +DPL S S  L  +       ++   +   +  +EE +DI
Sbjct: 328 SASIVLSRKRASEGFYPAIDPLQSRSIMLQPRILGERHYQVAREVRRTLATYEELKDI 385


>gi|156530145|gb|ABU75169.1| AtpB [Nothospondias staudtii]
          Length = 495

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTRSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|124361658|gb|ABN09271.1| ATP synthase beta subunit [Diospyros ferox]
          Length = 464

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|119367992|dbj|BAF40478.1| ATP synthase beta subunit [Synadenium grantii]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPID---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|114329753|ref|YP_740572.1| ATP synthase CF1 beta subunit [Platanus occidentalis]
 gi|122166028|sp|Q09G39|ATPB_PLAOC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|114054391|gb|ABI49785.1| ATP synthase CF1 beta subunit [Platanus occidentalis]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|61968279|gb|AAX57066.1| ATP synthase beta subunit [Pentabrachion reticulatum]
          Length = 479

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRATYSIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AE+F    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|30351905|emb|CAD48105.1| ATP synthase beta subunit [Veltheimia bracteata]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708183|emb|CAB90032.1| ATP synthase beta subunit [Blandfordia punicea]
          Length = 496

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|313184000|ref|YP_004021157.1| ATP synthase CF1 beta subunit [Castanea mollissima]
 gi|75324403|sp|Q6QBP2|ATPB_CASSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|45268497|gb|AAS55870.1| ATP synthase [Castanea sativa]
 gi|309321527|gb|ADO65067.1| ATP synthase CF1 beta subunit [Castanea mollissima]
          Length = 498

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|323715490|gb|ADY04813.1| ATP synthase beta subunit [Pileostegia viburnoides]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 93  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPH 151

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPALV 329

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 389

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 390 LQDIIAILG 398


>gi|170178342|gb|ACB10590.1| ATP synthase beta subunit [Cornus volkensii]
          Length = 455

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|159227354|emb|CAJ80468.1| ATP synthase beta subunit [Petunia sp.]
          Length = 336

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 156/301 (51%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|124361724|gb|ABN09304.1| ATP synthase beta subunit [Diospyros pseudomespilus]
          Length = 458

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|119367990|dbj|BAF40477.1| ATP synthase beta subunit [Pimelodendron griffithianum]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYDTAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|75328438|sp|Q85V35|ATPB_LACPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351913|emb|CAD48109.1| ATP synthase beta subunit [Lachenalia pusilla]
          Length = 493

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|24939899|emb|CAD43365.1| ATP synthase beta subunit [Antiphytum hintoniorum]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAQAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKSGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6467942|gb|AAF13241.1|AF197608_1 ATPase beta subunit [Anemopsis californica]
          Length = 487

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 47  KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDMGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 107 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 223

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 224 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 283

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 284 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 341

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 342 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 401

Query: 390 RLIGG 394
             I G
Sbjct: 402 IAILG 406


>gi|24940194|emb|CAD43379.1| ATP synthase beta subunit [Glandora diffusa]
          Length = 483

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|290490148|gb|ADD31481.1| ATP synthase CF1 beta subunit protein [Ehretia acuminata]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912884|gb|ACS72120.1| AtpB [Porphyrostachys parviflora]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+G++ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708325|emb|CAB89907.1| ATP synthase beta subunit [Hedera helix]
          Length = 481

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|32815655|gb|AAP88224.1| ATP synthase beta subunit [Pterocarya hupehensis]
          Length = 456

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|5758891|gb|AAD50865.1| ATP synthase beta subunit [Hemerocallis lilioasphodelus]
          Length = 496

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|198417905|gb|ACH87973.1| AtpD beta synthase chain [Pseudomonas chlororaphis]
          Length = 258

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V    D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYXPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDMASLGIYPAVDPLDSTSRQLD 242


>gi|257852962|gb|ACV71492.1| ATP synthase beta subunit [Luxemburgia octandra]
          Length = 478

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361654|gb|ABN09269.1| ATP synthase beta subunit [Diospyros ehretioides]
 gi|124361700|gb|ABN09292.1| ATP synthase beta subunit [Diospyros maritima]
 gi|124361716|gb|ABN09300.1| ATP synthase beta subunit [Diospyros olen]
 gi|124361738|gb|ABN09311.1| ATP synthase beta subunit [Diospyros styraciformis]
 gi|221078715|gb|ACL99432.1| ATP synthase beta subunit [Diospyros frutescens]
 gi|221078727|gb|ACL99438.1| ATP synthase beta subunit [Diospyros olen]
 gi|221078729|gb|ACL99439.1| ATP synthase beta subunit [Diospyros olen]
 gi|221078757|gb|ACL99453.1| ATP synthase beta subunit [Diospyros samoensis]
 gi|221078759|gb|ACL99454.1| ATP synthase beta subunit [Diospyros samoensis]
 gi|221078761|gb|ACL99455.1| ATP synthase beta subunit [Diospyros samoensis]
 gi|221078797|gb|ACL99473.1| ATP synthase beta subunit [Diospyros wallichii]
          Length = 465

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361666|gb|ABN09275.1| ATP synthase beta subunit [Diospyros flavocarpa]
 gi|124361684|gb|ABN09284.1| ATP synthase beta subunit [Diospyros labillardierei]
          Length = 453

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|56682987|gb|AAW21825.1| ATP synthase beta subunit [Microcycas calocoma]
          Length = 424

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 149

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 150 GVINEQDISRSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 209

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 267

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 268 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 326

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 327 RYKELQDIIAILG 339


>gi|7708155|emb|CAB89966.1| ATP synthase beta subunit [Apostasia stylidioides]
          Length = 494

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|24940180|emb|CAD43372.1| ATP synthase beta subunit [Echium vulgare]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|12004119|gb|AAG43899.1|AF213768_1 ATP synthase beta subunit [Diospyros digyna]
          Length = 487

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6687629|emb|CAB65019.1| ATP synthase beta subunit [Fendlera rupicola]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|301113824|ref|XP_002998682.1| ATP synthase subunit beta, putative [Phytophthora infestans T30-4]
 gi|262111983|gb|EEY70035.1| ATP synthase subunit beta, putative [Phytophthora infestans T30-4]
          Length = 472

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 150/294 (51%), Gaps = 20/294 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+ +D    +        I +  P    +    +   TG++V+D+  P   G 
Sbjct: 110 GRIMNVIGESVDERGPI-NAKRHAPIHTSAPLLTEQGSGAEILVTGMKVVDLLAPYAKGG 168

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
           +IG+F G+G+GK+ ++          ++I ++    G + R        D+  K+ +V  
Sbjct: 169 KIGLFGGAGVGKTVVIM---------ELINNVANNHGDQRRRH------DHGSKAALVYG 213

Query: 223 TSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +P A G
Sbjct: 214 QMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVG 273

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   +  S LD   VL+R 
Sbjct: 274 YQPTLATDLGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQ 331

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394
           ++E G YP VDPL S SR+ D      E   V+  T  L+  ++  +DI  I G
Sbjct: 332 ISELGIYPAVDPLDSKSRMLDPRIIGQEHYDVARATQKLLQDYKGLQDIIAILG 385


>gi|257852942|gb|ACV71482.1| ATP synthase beta subunit [Aneulophus africanus]
          Length = 478

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 93  GATLGRIFNVLGEPVDELGPVATRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 151

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 212 NEENITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYKE 389

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 390 LQDIIAILG 398


>gi|219552262|gb|ACL26846.1| ATP synthase beta chain [Phyllanthus virgatus]
          Length = 423

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  +   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---ELGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|110348949|gb|ABG73046.1| ATP synthase beta chain [Marsilea crotophora]
 gi|110348985|gb|ABG73064.1| ATP synthase beta chain [Marsilea polycarpa]
          Length = 395

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|32815645|gb|AAP88219.1| ATP synthase beta subunit [Carya ovata]
          Length = 457

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|13518421|ref|NP_084781.1| ATP synthase CF1 beta subunit [Lotus japonicus]
 gi|23813722|sp|Q9BBU0|ATPB_LOTJA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13358962|dbj|BAB33179.1| ATPase beta subunit [Lotus japonicus]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|229577761|ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis saniculifolia]
 gi|226933889|gb|ACO92022.1| ATP synthase CF1 beta subunit [Megaleranthis saniculifolia]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361780|gb|ABN09332.1| ATP synthase beta subunit [Lissocarpa guianensis]
          Length = 450

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361626|gb|ABN09255.1| ATP synthase beta subunit [Diospyros castanea]
          Length = 454

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361790|gb|ABN09337.1| ATP synthase beta subunit [Royena cordata]
          Length = 459

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361622|gb|ABN09253.1| ATP synthase beta subunit [Diospyros brandisiana]
 gi|124361628|gb|ABN09256.1| ATP synthase beta subunit [Diospyros cauliflora]
          Length = 463

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|118917412|dbj|BAF40521.1| ATP synthase beta subunit [Casearia sp. Tokuoka NC052]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGTEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6706286|emb|CAB65915.1| ATP synthase beta subunit [Phlox longifolia]
          Length = 491

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTTLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 222 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNAQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEXHYETAQRVKETLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|52788831|gb|AAU87388.1| ATP synthase beta chain [Ceratopteris richardii]
          Length = 378

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +      I    P           F+TGI+V+D+  P  
Sbjct: 2   LGRISNVLGEPVD---NLGPVQNSTKFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|305671649|gb|ADM63134.1| ATP synthase beta subunit [Heteromorpha arborescens var.
           abyssinica]
          Length = 482

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|160946289|ref|ZP_02093498.1| hypothetical protein PEPMIC_00249 [Parvimonas micra ATCC 33270]
 gi|158447405|gb|EDP24400.1| hypothetical protein PEPMIC_00249 [Parvimonas micra ATCC 33270]
          Length = 459

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 157/309 (50%), Gaps = 20/309 (6%)

Query: 102 CGRVINALGKPIDGDD---SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR  N +G+PID  D   S  K +++   M+ V     R  +E    TGI  ID  T L
Sbjct: 89  LGRTFNGVGEPIDNGDYIISEKKYNVNGRPMNPVAREYPRDYLE----TGISAIDTLTTL 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212
             GQ++ +F+ +G+  + L +   R      SD    ++ + +G +  +   F   +   
Sbjct: 145 IRGQKLPIFSSNGLTHNALAAQIVRQSKLKNSDDKFAIVFAGMGIKYDDYEFFKSAFEES 204

Query: 213 NLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
                VV      ++PI+ +++ P TA+T AEY +  +G ++L+++  IT +A ++REI+
Sbjct: 205 GASSRVVSYINLADAPIVERISTPRTALTAAEYLAFEEGMHILVVMTDITSYAEALREIS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
           +   E+P  +GYP  ++S+L  L ER G  + +KG+IT +  + +  D+   PI D    
Sbjct: 265 SAREEVPSRKGYPGYLYSDLSTLYERAGMVKGKKGSITLIPILTMPNDDITHPIPDLTGF 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385
           I +G IVL+R L ++  YPPV+ L S+SRL      D     D  ++ S L  L  +  E
Sbjct: 325 ITEGQIVLSRELFQKNIYPPVNILPSLSRLMKDGIGDGYTREDHDQVQSQLFALYSKVIE 384

Query: 386 TRDIRLIGG 394
            R +  I G
Sbjct: 385 VRSLSQIIG 393


>gi|124361762|gb|ABN09323.1| ATP synthase beta subunit [Diospyros sp. K20600]
 gi|124361786|gb|ABN09335.1| ATP synthase beta subunit [Maba magnifolia]
          Length = 453

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|30351921|emb|CAD48408.1| ATP synthase beta subunit [Scilla spetana]
          Length = 495

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6687664|emb|CAB65053.1| ATP synthase beta subunit [Halesia diptera]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|4995109|emb|CAB44011.1| H(+)-transporting ATP synthase [Dais cotinifolia]
          Length = 484

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 94  GSTLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 210 GVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIIAILG 399


>gi|75332460|sp|Q95AD6|ATPB_WHIBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943759|emb|CAD10770.1| atp synthase, beta subunit [Whiteheadia bifolia]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6689008|emb|CAB65351.1| ATP synthase beta subunit [Philadelphus lewisii]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|32815643|gb|AAP88218.1| ATP synthase beta subunit [Comptonia peregrina]
          Length = 449

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 70  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 126

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 127 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 186

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 187 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 246

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 304

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 364

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 365 KELQDIIAILG 375


>gi|5758854|gb|AAD50828.1| ATP synthase beta subunit [Aloe vera]
          Length = 496

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIXEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|3850900|gb|AAC72142.1| ATP synthase beta subunit [Bellendena montana]
          Length = 490

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|323715482|gb|ADY04809.1| ATP synthase beta subunit [Philadelphus californicus]
          Length = 486

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|289524102|ref|ZP_06440956.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289502758|gb|EFD23922.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 455

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 171/360 (47%), Gaps = 16/360 (4%)

Query: 43  VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGR-FRISPSA 99
           V  G+    + KN D+ LGQV+    D   +    G  + +     V   GR   +  S 
Sbjct: 25  VGFGELAQIRMKNGDHRLGQVVLNGEDATLVQVFSGTSDLVPETTAVRFLGRPLEMKLSP 84

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV + LG+P D D        S ++       M R       +TGI  ID+   L 
Sbjct: 85  ALIGRVFSGLGEPRD-DCGPVYSAYSRDVNGSPLNPMARVYPRNFIQTGISAIDVLATLI 143

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCF-----DKVIISLVGERGREVREFIEDYLGDNL 214
            GQ++ +F+G+G+  + L    A            V+ + +G +  +   F+E+      
Sbjct: 144 RGQKLPIFSGNGLPHNKLAVQIANQSQLVGEENFAVVFAGIGVKRDDAAYFMEELFEKGR 203

Query: 215 KKSVVVVATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
            K++VV     + P++ ++A P  A+T+ EY + + + +VL+I+  IT +  ++RE+   
Sbjct: 204 TKNMVVFLNLADDPVIERIATPRFALTVGEYLAFELNMHVLVIMTDITNYCEALREVGVA 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE+P  +GYP  ++S+L  L ER G  +  +G++T +  + +  D+   PI D    I 
Sbjct: 264 KGEVPSRKGYPGYMYSDLASLYERAGVLKGIQGSLTQIPILTMPNDDITHPIPDLTGFIT 323

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWS-ADEKKLVSSLTHLIHRFEETR 387
           +G IVL+R L   G YPP+D LAS+SRL      K ++  D   L S L     R ++ R
Sbjct: 324 EGQIVLSRELDSRGIYPPIDVLASLSRLMKDGIGKGYTREDHPDLASQLYASYSRVQDVR 383


>gi|282163008|ref|YP_003355393.1| A-type ATP synthase subunit B [Methanocella paludicola SANAE]
 gi|282155322|dbj|BAI60410.1| A-type ATP synthase subunit B [Methanocella paludicola SANAE]
          Length = 461

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 164/313 (52%), Gaps = 12/313 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           GQV+  + D+V +      E IS    V   G   ++  S    GR+++  G P+DG  +
Sbjct: 41  GQVLDTSKDVVVVQVFEGTEGISRECGVKFLGEAIKMPVSKDMLGRILSGAGDPLDGGPA 100

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +  ++I+       +R++ +   +TGI  ID    L  GQ++ +F+G+G+  + + 
Sbjct: 101 IIP-EKRLDIVGAAINPYSRRQPKDFIQTGISTIDGMNTLVRGQKLPIFSGAGLPHNEIA 159

Query: 179 SMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPIL 230
              AR       ++ F  V+   +G    E + F++D+     L+++VV +  +D+  I 
Sbjct: 160 LQIARQAKVVGSTEPF-AVVFCAMGITSEEAQTFMQDFERTGALERAVVFMNLADDPAIE 218

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R + P  A+T AEY + + D +VL+I   +T +  ++R+I     E+P  RGYP  ++++
Sbjct: 219 RIITPRLALTTAEYLAFEHDMHVLVIYTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTD 278

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  L ER G  + +KG+IT V  + + GD+   PI D    I +G IV+ R L  +G YP
Sbjct: 279 LAMLYERAGMIDGKKGSITQVPILTMPGDDITHPIPDLTGYITEGQIVVARDLHRKGIYP 338

Query: 350 PVDPLASVSRLAD 362
           P++   S+SRL +
Sbjct: 339 PINVSPSLSRLMN 351


>gi|315231457|ref|YP_004071893.1| V-type ATP synthase subunit B [Thermococcus barophilus MP]
 gi|315184485|gb|ADT84670.1| V-type ATP synthase subunit B [Thermococcus barophilus MP]
          Length = 462

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 180/357 (50%), Gaps = 22/357 (6%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNL-GQVI--RINLDIVYICPV 75
           + G   S+I+ +Y  +  +   + V  G+ V  + ++ +   GQV+  R ++ IV +   
Sbjct: 1   MSGREYSTISKIYGPLMIVQGVKGVAYGEVVEIETESGERRKGQVLEAREDMAIVQVFEG 60

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKV 132
               ++    + F     ++  S    GRV + +GKPIDG   +    + D+    ++ V
Sbjct: 61  TRDLDVKTTRVRFTGETLKVPVSMDMLGRVFSGIGKPIDGGPEIIPEDRRDVHGAPLNPV 120

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------D 185
             A  R  ++    TGI  ID    L  GQ++ +F+GSG+  + L +  AR        +
Sbjct: 121 ARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEE 176

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
            F  V+ + +G    E   F + +     ++++V+ +  +D+  I R + P  A+T+AEY
Sbjct: 177 QF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEY 235

Query: 245 FSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            +   D  VL+IL  +T +  ++REI+    E+P  RGYP  ++++L  + ER G    +
Sbjct: 236 LAFDYDMQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYLYTDLATIYERAGRVRGK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           KG+IT +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL
Sbjct: 296 KGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPIDVLPSLSRL 352


>gi|157689166|gb|ABV65139.1| ATP synthase CF1 beta subunit [Quercus nigra]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|159227340|emb|CAJ80461.1| ATP synthase beta subunit [Solanum laciniatum]
 gi|159227342|emb|CAJ80462.1| ATP synthase beta subunit [Solanum laciniatum]
 gi|159227344|emb|CAJ80463.1| ATP synthase beta subunit [Solanum laciniatum]
          Length = 336

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 156/302 (51%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|124361748|gb|ABN09316.1| ATP synthase beta subunit [Diospyros undulata]
          Length = 465

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLYTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|61968233|gb|AAX57043.1| ATP synthase beta subunit [Cleistanthus perrieri]
          Length = 479

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 153/306 (50%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GSTLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDI 389
           +E +DI
Sbjct: 387 KELQDI 392


>gi|6686771|emb|CAB64690.1| ATP synthase beta subunit [Alseuosmia macrophylla]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|32815657|gb|AAP88225.1| ATP synthase beta subunit [Annamocarya sinensis]
          Length = 457

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|323715426|gb|ADY04781.1| ATP synthase beta subunit [Alangium platanifolium]
          Length = 483

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|305671701|gb|ADM63160.1| ATP synthase beta subunit [Pseudopanax colensoi]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|241912868|gb|ACS72112.1| AtpB [Myrosmodes cochlearis]
 gi|241912870|gb|ACS72113.1| AtpB [Myrosmodes cochlearis]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R     TA+T+AEYF    + NVLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGFTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|91983999|ref|YP_567083.1| ATP synthase CF1 beta subunit [Vitis vinifera]
 gi|118573777|sp|Q0ZJ13|ATPB_VITVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|91701657|gb|ABE47541.1| ATP synthase CF1 beta subunit [Vitis vinifera]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6467944|gb|AAF13243.1|AF197610_1 ATPase beta subunit [Orontium aquaticum]
          Length = 487

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 173/368 (47%), Gaps = 35/368 (9%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 47  KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D S    I    P  +        F+TGI+V+D+  P   G 
Sbjct: 107 IFNVLGEPVD---DLGPVDTSTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------ED 208
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E 
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 222

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
            + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 223 KIADS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 280

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 281 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 338

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E 
Sbjct: 339 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKEL 398

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 399 QDIIAILG 406


>gi|14718020|gb|AAK72751.1| ATP synthase beta subunit [Crossosoma californicum]
          Length = 483

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 98  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 215 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 332

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 392

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 393 ELQDIIAILG 402


>gi|6689010|emb|CAB65359.1| ATP synthase beta subunit [Petalonyx nitidus]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|124361612|gb|ABN09248.1| ATP synthase beta subunit [Diospyros australis]
 gi|124361614|gb|ABN09249.1| ATP synthase beta subunit [Diospyros australis]
 gi|124361624|gb|ABN09254.1| ATP synthase beta subunit [Diospyros brassica]
 gi|124361690|gb|ABN09287.1| ATP synthase beta subunit [Diospyros macrocarpa]
 gi|221078689|gb|ACL99419.1| ATP synthase beta subunit [Diospyros balansae]
 gi|221078721|gb|ACL99435.1| ATP synthase beta subunit [Diospyros macrocarpa]
 gi|221078731|gb|ACL99440.1| ATP synthase beta subunit [Diospyros oubatchensis]
 gi|221078733|gb|ACL99441.1| ATP synthase beta subunit [Diospyros oubatchensis]
          Length = 465

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361744|gb|ABN09314.1| ATP synthase beta subunit [Diospyros tetrasperma]
          Length = 463

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIIGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|88603031|ref|YP_503209.1| V-type ATP synthase subunit B [Methanospirillum hungatei JF-1]
 gi|121730960|sp|Q2FQF0|VATB3_METHJ RecName: Full=V-type ATP synthase beta chain 3; AltName:
           Full=V-ATPase subunit B 3
 gi|88188493|gb|ABD41490.1| Sodium-transporting two-sector ATPase [Methanospirillum hungatei
           JF-1]
          Length = 469

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 17/285 (5%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F     +IS S+   GR  +   +PIDG   +    +     S + P+  R+      +T
Sbjct: 76  FRGEPMKISLSSDMLGRTFDGSARPIDGGGPVIPECIRDIYGSPINPSA-REHPRDSIQT 134

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVG---- 196
           GI  ID    L  GQ++ +F+G+G+  + L S  AR       ++ F  V+ + +G    
Sbjct: 135 GISSIDGMNTLVRGQKLPIFSGAGLPHNLLASQIARQAKVTGQAEKF-AVVFAAMGITYE 193

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLI 255
           E    +REF E      L+++V+ +  +D+  I R + P  A+T AEY +  KG +VL++
Sbjct: 194 ESAFFIREFEES---GALERTVLFLNLADDPAIERIITPRLALTTAEYLAFDKGMHVLVV 250

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  +T +  ++REIA    E+P  RGYP  ++++L  L ER G     +G+IT +  + +
Sbjct: 251 LTDLTNYCEALREIAAAREEVPGRRGYPGYIYTDLASLYERAGRIRGREGSITQIPILTM 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             D+   P+ D    I +G IVL+R L  +G YPPVD L  +SRL
Sbjct: 311 PDDDITHPVPDLTGYITEGQIVLSRDLHRKGIYPPVDVLPCLSRL 355


>gi|7706848|emb|CAB90075.1| ATP synthase beta subunit [Amaranthus hypochondriacus]
          Length = 456

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  
Sbjct: 80  GTTLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R     TA+T+AEYF    + +VLL +D+I RF  
Sbjct: 197 VINEQNIAESKVALVYGQMNEPPGARMRVGXTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|37729420|gb|AAN71676.1| ATP synthase beta subunit [Nothofagus antarctica]
          Length = 472

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+++  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDASTRSPIHRSAPAFIQLDTKLSIFETGIKVVNLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSXMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|37729410|gb|AAN71671.1| ATP synthase beta subunit [Alnus viridis subsp. sinuata]
          Length = 469

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|227501038|ref|ZP_03931087.1| V family two sector ATPase, V(1) subunit B [Anaerococcus tetradius
           ATCC 35098]
 gi|227216811|gb|EEI82209.1| V family two sector ATPase, V(1) subunit B [Anaerococcus tetradius
           ATCC 35098]
          Length = 455

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 17/318 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+VI I  D  +V +     G  +    + F      +  S    GR  N LG+PID   
Sbjct: 42  GRVIEIEKDRAMVQLFEGSTGINLKSTSVRFLGRPLELGVSEDMIGRAFNGLGEPIDDGP 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           ++    K D++   ++ V    +R    +  +TGI  ID    L  GQ++ +F+G+G+  
Sbjct: 102 AIIPEEKRDVNGTAINPV----SRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGNGLPH 157

Query: 175 STLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           + + +  AR       D    V+ + +G    E + F+ D+     L +SV+ +  +D+ 
Sbjct: 158 NQVAAQIARQARVLSDDEGFAVVFAAIGITFEEAQFFMNDFRKTGALDRSVLFMNLADDP 217

Query: 228 PILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            I R   P  A+T AEY + + D  VL+I+  +T +A ++RE++    E+P  RGYP  +
Sbjct: 218 AIERLSTPKMALTAAEYLAFEKDMQVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +++L  + ER G    + G IT +  + +  D+   PI D    I +G I+LNR L  +G
Sbjct: 278 YTDLSTIYERAGKLRGKPGTITQIPILSMPEDDITHPIPDLTGYITEGQIILNRELYNQG 337

Query: 347 RYPPVDPLASVSRLADKA 364
             PPV  L S+SRL DK 
Sbjct: 338 VEPPVSILPSLSRLKDKG 355


>gi|30351871|emb|CAD48088.1| ATP synthase beta subunit [Rhadamanthus mascarenensis]
          Length = 486

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|24940184|emb|CAD43374.1| ATP synthase beta subunit [Emmenanthe penduliflora]
          Length = 485

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|11558464|emb|CAC17750.1| ATP synthase subunit B [Deutzia rubens]
          Length = 487

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P
Sbjct: 98  ATLGRIFNVLGEPVD---NLGPVDTRITSPIHRCAPAFIQLDTKLSIFETGIKVVDLLAP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 215 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 332

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 392

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 393 ELQDIIAILG 402


>gi|7708294|emb|CAB90076.1| ATP synthase beta subunit [Elaeagnus sp. Chase 2414]
          Length = 469

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 216

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 217 SGVINEQNIAESKVAXXYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 276

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 334

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 335 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 394

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 395 RYKELQDIIAILG 407


>gi|8452720|emb|CAB89968.1| ATP synthase beta subunit [Penthorum sedoides]
          Length = 497

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKXGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|323715504|gb|ADY04820.1| ATP synthase beta subunit [Mentzelia decapetala]
          Length = 479

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|323715488|gb|ADY04812.1| ATP synthase beta subunit [Kirengeshoma palmata]
          Length = 487

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRCAPAFIQLDTKLSIFETGIKVVDLLP 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G++P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGKMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|123325577|gb|ABM74413.1| ATP synthase beta subunit [Atalantia citroides]
          Length = 466

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I ++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLXTEMGSLQERI--TSTKEGSIXSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|149384377|gb|ABR25011.1| ATP synthase beta chain [Anemia tomentosa]
          Length = 426

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 95

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  + 
Sbjct: 155 NEQNVSESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|124361718|gb|ABN09301.1| ATP synthase beta subunit [Diospyros pentamera]
          Length = 457

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361692|gb|ABN09288.1| ATP synthase beta subunit [Diospyros maingayi]
 gi|124361728|gb|ABN09306.1| ATP synthase beta subunit [Diospyros puncticulosa]
          Length = 465

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRYAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|118917356|dbj|BAF40464.1| ATP synthase beta subunit [Adenocline acuta]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDSRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  K    +  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|37721011|gb|AAN32508.1| ATP synthase beta subunit [Aphyllanthes monspeliensis]
          Length = 497

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708319|emb|CAB90084.1| ATP synthase beta subunit [Goupia glabra]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|24940164|emb|CAD43393.1| ATP synthase beta subunit [Buglossoides purpurocaerulea]
          Length = 480

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|7578495|gb|AAF64070.1|AF132888_1 ATP synthase, B subunit [Quercus rubra]
          Length = 488

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|323715420|gb|ADY04778.1| ATP synthase beta subunit [Alangium kurzii]
 gi|323715422|gb|ADY04779.1| ATP synthase beta subunit [Alangium chinense]
 gi|323715424|gb|ADY04780.1| ATP synthase beta subunit [Alangium salviifolium]
          Length = 483

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|183206502|gb|ACC54449.1| ATP synthase beta subunit [Jasione montana]
          Length = 469

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVX-ERTREGNDLYKEMKES 201

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 202 GVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G++  A  Y     +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGKMASAVXYQPXXSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIITILG 391


>gi|158602269|gb|ABW74601.1| ATP synthase beta subunit [Eranthis hyemalis]
          Length = 476

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFXTGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|159227350|emb|CAJ80466.1| ATP synthase beta subunit [Solanum atropurpureum]
          Length = 336

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 153/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V   ++E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQTNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|37729412|gb|AAN71672.1| ATP synthase beta subunit [Betula platyphylla]
          Length = 469

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKEXG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|323715462|gb|ADY04799.1| ATP synthase beta subunit [Deutzia scabra]
 gi|323715464|gb|ADY04800.1| ATP synthase beta subunit [Deutzia corymbosa]
          Length = 483

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTRITSPIHRCAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|184127845|gb|ACC67822.1| ATP synthase beta chain [Marattia laevis]
          Length = 403

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  S   + K  PA  +   +   F+TGI+V+D+  P   
Sbjct: 16  LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 73

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 74  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 133

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 134 ENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 193

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 194 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 251

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 252 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 310

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 311 QDIIAILG 318


>gi|156622721|dbj|BAF76341.1| ATP synthase beta subunit [Ceratophyllum demersum]
          Length = 488

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|124361752|gb|ABN09318.1| ATP synthase beta subunit [Diospyros vestita]
          Length = 451

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|124361782|gb|ABN09333.1| ATP synthase beta subunit [Lissocarpa kating]
          Length = 451

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|118917366|dbj|BAF40473.1| ATP synthase beta subunit [Actinostemon concolor]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 157/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPID---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 212

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
              E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 VINEEKIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 270

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 271 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 328

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 329 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|37720999|gb|AAN32502.1| ATP synthase beta subunit [Amerorchis rotundifolia]
          Length = 497

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTTLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E    + +      R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYGTAQMVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|30351873|emb|CAD48095.1| ATP synthase beta subunit [Charybdis undulata]
          Length = 493

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|6688708|emb|CAB65231.1| ATP synthase beta subunit [Mentzelia lindleyi]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|15639518|ref|NP_218968.1| V-type ATP synthase subunit B [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025757|ref|YP_001933529.1| V-type ATP synthase subunit B [Treponema pallidum subsp. pallidum
           SS14]
 gi|12585436|sp|O83540|VATB2_TREPA RecName: Full=V-type ATP synthase beta chain 2; AltName:
           Full=V-ATPase subunit B 2
 gi|3322820|gb|AAC65515.1| V-type ATPase, subunit B (atpB-2) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018332|gb|ACD70950.1| V-type ATPase, subunit B [Treponema pallidum subsp. pallidum SS14]
 gi|291059906|gb|ADD72641.1| V-type ATP synthase beta chain 2 [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 480

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 14/305 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV + LG+PIDG   +    L       + P   R       +TGI  ID    L  GQ
Sbjct: 88  GRVFDGLGRPIDGFPEVLSSQLRNVNGYPINP-YARVYPRDFIQTGISAIDGMNTLIRGQ 146

Query: 163 RIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215
           ++ +F+G+G+  + L +   R      +D    ++ + +G +    R F+  +     L 
Sbjct: 147 KLPIFSGNGLAHNRLAAQIIRQAKILGTDEAFVMVFAGMGIKHDVARFFVSSFEETGVLS 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274
           K V+ ++ +D   I R + P  A+T AEY +  K  +VL+I   +T +  ++RE++T  G
Sbjct: 207 KVVMFLSLADAPSIERIITPRCALTAAEYLAFEKNKHVLVIFTDMTNYCEALREVSTTRG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  +GYP  ++S+L  L ER G  +   G++T +  + +  D+ + PI D    I +G
Sbjct: 267 EVPGRKGYPGYLYSDLAELYERAGRVKGSSGSVTQIPILTMPNDDISHPIPDLTGYITEG 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            IVL R L++ G YPP+  L S+SRL      +    AD   + S L     R +  R +
Sbjct: 327 QIVLQRDLSQRGLYPPIGCLPSLSRLMKDGIGEGMTRADHHAVSSQLFASYARVQSVRSL 386

Query: 390 RLIGG 394
             I G
Sbjct: 387 ASIVG 391


>gi|290490164|gb|ADD31489.1| ATP synthase CF1 beta subunit protein [Ximenia americana]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPALIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY--- 209
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKES 219

Query: 210 --LGD-NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
             + D N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINDQNIAESKVSLVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIIGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|52082885|gb|AAU26023.1| ATPase beta subunit [Gymnotheca involucrata]
          Length = 476

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|30351875|emb|CAD48089.1| ATP synthase beta subunit [Charybdis hesperia]
 gi|30351877|emb|CAD48090.1| ATP synthase beta subunit [Charybdis aphylla]
          Length = 492

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTPTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|24940166|emb|CAD43367.1| ATP synthase beta subunit [Cerinthe major]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708189|emb|CAB90039.1| ATP synthase beta subunit [Carpenteria californica]
          Length = 481

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|32815633|gb|AAP88213.1| ATP synthase beta subunit [Carpinus betulus]
          Length = 457

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKSGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|52788840|gb|AAU87390.1| ATP synthase beta chain [Hymenophyllopsis dejecta]
 gi|99640598|emb|CAJ45108.1| putative beta subunit of chloroplast ATP synthase [Hymenophyllopsis
           dejecta]
          Length = 383

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPSFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|37729414|gb|AAN71673.1| ATP synthase beta subunit [Ticodendron incognitum]
          Length = 472

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVAXVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|241912910|gb|ACS72133.1| AtpB [Sauroglossum aurantiacum]
          Length = 489

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|159232324|emb|CAJ80677.1| ATP synthase beta subunit [Atropa belladonna]
          Length = 336

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 156/302 (51%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PXTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|16943763|emb|CAD10773.1| atp synthase, beta subunit [Lomandra ordii]
          Length = 498

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|24940178|emb|CAD43395.1| ATP synthase beta subunit [Echiochilon kotschyi]
          Length = 484

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|32815649|gb|AAP88221.1| ATP synthase beta subunit [Engelhardia fenzelii]
          Length = 457

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|55056910|emb|CAF21956.1| ATP synthase beta subunit [Taxus brevifolia]
          Length = 437

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG    L+   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 68  TTLGRIFNVLGEPVD---DLGPVNALTTSPIHRSAPAFTQLDXKFSIFETGIKVVDLLAP 124

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     
Sbjct: 125 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 183

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 184 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 243

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 244 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 301

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +   +   +E  +    +   + R+
Sbjct: 302 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 361

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 362 KELQDIIAILG 372


>gi|52082879|gb|AAU26020.1| ATPase beta subunit [Houttuynia cordata]
          Length = 474

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|30351925|emb|CAD48410.1| ATP synthase beta subunit [Hyacinthella heldreichii]
          Length = 495

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|15705382|gb|AAL05619.1| AtpB [Ceratophyllum submersum]
          Length = 487

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|5758859|gb|AAD50833.1| ATP synthase beta subunit [Calectasia intermedia]
          Length = 496

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|3850926|gb|AAC72155.1| ATP synthase beta subunit [Isopogon buxifolius]
          Length = 490

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAXRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|11498767|ref|NP_069996.1| V-type ATP synthase subunit B [Archaeoglobus fulgidus DSM 4304]
 gi|2649415|gb|AAB90073.1| H+-transporting ATP synthase, subunit B (atpB) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 472

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 151/285 (52%), Gaps = 15/285 (5%)

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           GD+V      +++ S    GR+++  G+PIDG   +   +    + + + P   RQ   +
Sbjct: 74  GDIV------KLNCSQDMLGRILSGSGEPIDGGPKIVPEERRPIVGAAINP-YARQYPRE 126

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGE 197
             +TGI  ID    L  GQ++ +F+GSG+  + +    AR            VI + +G 
Sbjct: 127 FIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIALQIARQAKVRGEGEEFAVIFAAMGI 186

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
              E  +F++++     L+++VV +  +++  I R + P  A+T AE+ + + D ++L+I
Sbjct: 187 TYEEAYQFMKEFERTGALERAVVFLNLANDPAIERLLTPRMALTAAEFLAYEYDLHILVI 246

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  +T +  ++REI+    E+P  RGYP  ++++L  + ER G     KG IT +  + +
Sbjct: 247 LTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMPILTM 306

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            GD+   PI D    I +G IVL+R L  +G YPP++ L S+SRL
Sbjct: 307 PGDDITHPIPDLTGYITEGQIVLSRELHAKGIYPPINVLPSLSRL 351


>gi|323715466|gb|ADY04801.1| ATP synthase beta subunit [Deutzia setchuenensis]
          Length = 486

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTRITSPIHRCAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|312285237|gb|ADQ64360.1| ATP synthase beta subunit [Legnephora moorei]
          Length = 469

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIXRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|302388502|ref|YP_003824324.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium saccharolyticum WM1]
 gi|302199130|gb|ADL06701.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium saccharolyticum WM1]
          Length = 467

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 24/285 (8%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
             ++ S    GR  N +G+PIDG   +   D+ ++I  K    + R+      +TGI  I
Sbjct: 77  MELAVSEDMLGRTFNGIGEPIDGLGDISS-DIRLDINGKPLNPVTREYPRDYIRTGISAI 135

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----------SDCFDKVIISLVGERGREV 202
           D    L  GQ++ +F+G+G+    L +   +          S+ F  V+ + +G     V
Sbjct: 136 DGLMTLIRGQKLPIFSGNGLPHDELAAQIVQQASLGDDSLSSEQF-AVVFAAMG-----V 189

Query: 203 REFIEDYLGDNLKKS------VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLI 255
           +  + D+     ++S       + +  +++  + R + P  A+T+AEY +  KG ++L+I
Sbjct: 190 KYDVADFFRRTFEESGVSDHVAMFINLANDPVVERLITPKVALTLAEYLAFEKGMHILVI 249

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  +T +A ++RE++++ GE+P  +GYP  ++SEL  L ER G  +   G++T +  + +
Sbjct: 250 LTDMTAYAEALREVSSSKGEIPSRKGYPGYLYSELASLYERAGIVKDRHGSVTQIPILTM 309

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             D+   PI D    I +G IVL+RSL  +  YPP++ L S+SRL
Sbjct: 310 PNDDITHPIPDLTGYITEGQIVLDRSLYGQSVYPPINVLPSLSRL 354


>gi|170293959|gb|ACB13073.1| ATP synthase beta subunit [Klebsormidium dissectum]
          Length = 366

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 19  ATLGRIFNVLGEPVD---NLGPVNNTKTFPIHRAAPAFTQLDTKLAIFETGIKVVDLLAP 75

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S
Sbjct: 76  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKES 133

Query: 218 VV-------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            V             V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 134 KVINEQDISQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 193

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 194 QAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDP 251

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 252 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKETLQ 310

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 311 RYKELQDIIAILG 323


>gi|30351863|emb|CAD48084.1| ATP synthase beta subunit [Oziroe biflora]
          Length = 495

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708501|emb|CAB89930.1| ATP synthase beta subunit [Morella cerifera]
          Length = 469

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|14717950|gb|AAK72717.1| ATP synthase beta subunit [Barbeya oleoides]
          Length = 486

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|12004127|gb|AAG43903.1|AF213772_1 ATP synthase beta subunit [Ardisiandra wettsteinii]
          Length = 487

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|257853472|gb|ACV71738.1| ATP synthase beta subunit [Johnsonia pubescens]
          Length = 479

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|158602279|gb|ABW74606.1| ATP synthase beta subunit [Laccopetalum giganteum]
          Length = 494

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTQLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIXRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|110915698|gb|ABH02637.1| ATP synthase beta subunit [Sesleria caerulea]
          Length = 471

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 152/305 (49%), Gaps = 20/305 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +        + R+
Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRXKETLQRY 371

Query: 384 EETRD 388
           +E +D
Sbjct: 372 KELQD 376


>gi|42559046|gb|AAS20209.1| ATP synthase beta subunit [Luzuriaga radicans]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 157/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   +
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|91983087|gb|ABE68640.1| ATP synthase subunit B [Guamatela tuerckheimii]
          Length = 462

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|37721013|gb|AAN32509.1| ATP synthase beta subunit [Asparagus officinalis]
          Length = 476

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|30351889|emb|CAD48097.1| ATP synthase beta subunit [Pseudoprospero firmifolium]
          Length = 493

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|4995763|emb|CAB44249.1| H(+)-transporting ATP synthase [Phaleria capitata]
          Length = 477

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GSTLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 201

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 202 GVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 319

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 379

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 380 YKELQDIIAILG 391


>gi|7708284|emb|CAB90069.1| ATP synthase beta subunit [Erythroxylum confusum]
          Length = 492

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E   L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEXGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|7708252|emb|CAB90055.1| ATP synthase beta subunit [Campanula trachelium]
          Length = 493

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 217

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K   V    +E P  R    LTA+T+AEYF      +VLL +D+I    
Sbjct: 218 GVINEQKFAESKVAXVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFGLV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQLTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R
Sbjct: 336 APATHIAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIITILG 407


>gi|7708448|emb|CAB89912.1| ATP synthase beta subunit [Ipheion dialystemon]
          Length = 488

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|75338439|sp|Q9TMU1|ATPB_CONMJ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5758865|gb|AAD50839.1| ATP synthase beta subunit [Convallaria majalis]
          Length = 495

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSGPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|308746006|ref|YP_003934565.1| ATP synthase CF1 beta subunit [Cheilanthes lindheimeri]
 gi|302375439|gb|ADL29813.1| ATP synthase CF1 beta subunit [Cheilanthes lindheimeri]
          Length = 493

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 105 LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 399 LQDIIAI----PGLD 409


>gi|118918087|dbj|BAF40432.1| ATP synthase beta subunit [Dasylepis brevipedicellata]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GVTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDTTTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|20269422|gb|AAM17938.1| ATP synthase beta subunit [Lissocarpa guianensis]
          Length = 435

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGXRMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004153|gb|AAG43916.1|AF213785_1 ATP synthase beta subunit [Primula palinuri]
          Length = 444

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 161/313 (51%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   E   F+TGI+V+D+  
Sbjct: 63  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTELSIFETGIKVVDLLA 119

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR------EVRE-- 204
           P   G +IG+F G+G+GK+ L+    +  A++     V   +    G       E++E  
Sbjct: 120 PYRRGGKIGLFGGAGVGKTVLIMELINXIAKAHGGVSVFGGVGERTGEGNDLYMEMKESG 179

Query: 205 -FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
              E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 180 VINEENIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 237

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 238 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 295

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 296 PAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQ 355

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 356 RYKELQDIIAILG 368


>gi|7708646|emb|CAB89986.1| ATP synthase beta subunit [Sloanea berteroana]
          Length = 476

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               G++ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGQIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|66276271|gb|AAY44150.1| ATP synthase beta subunit [Datisca glomerata]
          Length = 488

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   + G  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NFGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFQDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|12585403|sp|O29100|VATB_ARCFU RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
          Length = 470

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 151/285 (52%), Gaps = 15/285 (5%)

Query: 84  GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           GD+V      +++ S    GR+++  G+PIDG   +   +    + + + P   RQ   +
Sbjct: 72  GDIV------KLNCSQDMLGRILSGSGEPIDGGPKIVPEERRPIVGAAINP-YARQYPRE 124

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGE 197
             +TGI  ID    L  GQ++ +F+GSG+  + +    AR            VI + +G 
Sbjct: 125 FIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIALQIARQAKVRGEGEEFAVIFAAMGI 184

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
              E  +F++++     L+++VV +  +++  I R + P  A+T AE+ + + D ++L+I
Sbjct: 185 TYEEAYQFMKEFERTGALERAVVFLNLANDPAIERLLTPRMALTAAEFLAYEYDLHILVI 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  +T +  ++REI+    E+P  RGYP  ++++L  + ER G     KG IT +  + +
Sbjct: 245 LTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMPILTM 304

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            GD+   PI D    I +G IVL+R L  +G YPP++ L S+SRL
Sbjct: 305 PGDDITHPIPDLTGYITEGQIVLSRELHAKGIYPPINVLPSLSRL 349


>gi|323715480|gb|ADY04808.1| ATP synthase beta subunit [Philadelphus mexicanus]
          Length = 484

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|305671659|gb|ADM63139.1| ATP synthase beta subunit [Tetraplasandra oahuensis]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|30351907|emb|CAD48106.1| ATP synthase beta subunit [Daubenya aurea]
          Length = 494

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|32815635|gb|AAP88214.1| ATP synthase beta subunit [Corylus avellana]
          Length = 457

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|156739828|gb|ABU93567.1| ATP synthase beta subunit [Lomariopsis spectabilis]
          Length = 391

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N  G+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRIFNVPGEPVD---NLGPVQSSVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGD 212
            G +IG+F G+G+GK+ L++    +         +   VGER RE      E  E  + D
Sbjct: 93  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVID 152

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|224830554|gb|ACN66372.1| ATP synthase beta chain [Orthomene schomburgkii]
          Length = 476

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +    +   F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQXDTILSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VIKEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|113910918|gb|ABI48191.1| ATPase beta subunit [Lycopodium clavatum var. clavatum]
          Length = 416

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   SLG  D+ +   + +  PA  +   +   F+TGI+V+D   P
Sbjct: 58  ATLGRIFNVLGEPVD---SLGPVDVGTTSPIHRNAPAFAQLDTKLSIFETGIKVVDPLAP 114

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 115 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 174

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 175 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 234

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 235 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 292

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S   +  + W   E+  +    +   + R+
Sbjct: 293 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTPTML-QPWIVGEQHYETAQEVKQTLQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|37721015|gb|AAN32510.1| ATP synthase beta subunit [Chlorophytum comosum]
          Length = 488

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|118573511|sp|Q85V57|ATPB_BOWVO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351867|emb|CAD48086.1| ATP synthase beta subunit [Bowiea sp. MP H600]
          Length = 495

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NFGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|8452620|emb|CAB94250.1| ATP synthase beta subunit [Bulbine succulenta]
          Length = 492

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 47  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 107 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 223

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 224 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 283

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 284 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 341

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 342 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 401

Query: 390 RLIGG 394
             I G
Sbjct: 402 IAILG 406


>gi|24940176|emb|CAD43394.1| ATP synthase beta subunit [Echiochilon collenettei]
          Length = 483

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKXSG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|12004161|gb|AAG43920.1|AF213789_1 ATP synthase beta subunit [Samolus repens]
          Length = 432

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 50  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 106

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 107 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 166

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 167 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 226

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 227 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 284

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R +
Sbjct: 285 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRXK 344

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 345 ELQDIIAILG 354


>gi|29726134|gb|AAD10326.2| ATP synthase beta subunit [Dicranostigma franchetianum]
          Length = 492

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTXXXXPIHRSAPAFIQLDTKLSIFETGIXVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAXGXVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RFA 
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFAQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|159232202|emb|CAJ80616.1| ATP synthase beta subunit [Physochlaina physaloides]
          Length = 336

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 156/302 (51%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|110348999|gb|ABG73071.1| ATP synthase beta chain [Pilularia americana]
 gi|166836600|gb|ABY90532.1| ATP synthase beta chain [Pilularia novae-hollandiae]
 gi|166836602|gb|ABY90533.1| ATP synthase beta chain [Pilularia novae-zelandiae]
          Length = 395

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRTPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|99034274|ref|ZP_01314327.1| hypothetical protein Wendoof_01000873 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 350

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 148/283 (52%), Gaps = 22/283 (7%)

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVG 196
           E+   TGI+VID+  P   G +IG+F G+G+GK+ L+     ++      F   + + VG
Sbjct: 1   EEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVG 58

Query: 197 ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   + +  N+         ++V+V    +E P  R    LTA+T+AEYF  +
Sbjct: 59  ERTREGNDLYHEMITSNVININEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDR 118

Query: 249 -GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VL  +D+I RF  +  EI+   G +P A GY  ++ +++  + ERI  +    G+I
Sbjct: 119 ENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSI 176

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWS 366
           T+V ++ V  D+  DP   +  S LD   VL+R +AE G YP VDPL S S+ L+ +   
Sbjct: 177 TSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIG 236

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD---LILDKA 406
            +   + S +  ++  ++  +DI  I G     D   +I+D+A
Sbjct: 237 EEHYNVASEVKRILQTYKSLQDIIAILGMDELSDEDKIIVDRA 279


>gi|30351901|emb|CAD48103.1| ATP synthase beta subunit [Resnova humifusa]
          Length = 494

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|24940260|emb|CAD43388.1| ATP synthase beta subunit [Phacelia grandiflora]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14717964|gb|AAK72724.1| ATP synthase beta subunit [Behnia reticulata]
          Length = 484

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMVSLQERI--TSTKEGSITSIPAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|5758895|gb|AAD50869.1| ATP synthase beta subunit [Maranta bicolor]
          Length = 496

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|5758889|gb|AAD50863.1| ATP synthase beta subunit [Heliconia rostrata]
          Length = 496

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLETKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|226315035|ref|YP_002774931.1| ATP synthase alpha chain [Brevibacillus brevis NBRC 100599]
 gi|254807681|sp|C0Z778|ATPA_BREBN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226097985|dbj|BAH46427.1| ATP synthase alpha chain [Brevibacillus brevis NBRC 100599]
          Length = 503

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 158/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G V+ +  D V +  +G   +I  GD V   GR    P      GRV+N LG+PIDG  
Sbjct: 61  MGMVLNLEEDNVGVVIMGPFRDIKEGDTVKRTGRVMEVPVGEALLGRVVNPLGQPIDGQG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        I S  P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 121 PIANNGFR-PIESPAPGVMARKSVHEPLQTGIKAIDAMIPVGRGQRELIIGDRQTGKTAV 179

Query: 178 -LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVAT-SDESPILRKM 233
            L         D + I + +G++   V   +E       L+ +++V AT SD +P+L  +
Sbjct: 180 ALDTIINQKGKDMICIYVAIGQKQSTVANIVETLRKAGALEYTIIVSATASDPAPMLY-L 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T VT+AEYF  KG +VL + D +++ A + RE++      P    YP  VF    RL
Sbjct: 239 APYTGVTMAEYFMYKGGHVLCVYDDLSKQAAAYREMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      +   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V
Sbjct: 299 LERAAKLSDDLGAGSITALPFIETQAGDISAYIPTNVISITDGQIFLETDLFNAGQRPAV 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     KK+   L   + ++ E
Sbjct: 359 NTGLSVSRVGGSAQIKAMKKVAGPLKLELAQYRE 392


>gi|159161167|ref|YP_001542454.1| ATP synthase CF1 beta subunit [Ceratophyllum demersum]
 gi|190358277|sp|A8SEB0|ATPB_CERDE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148508450|gb|ABQ81457.1| ATP synthase CF1 beta subunit [Ceratophyllum demersum]
 gi|227481126|emb|CAP62505.1| ATPase beta subunit [Ceratophyllum demersum]
          Length = 498

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|155029337|dbj|BAF75552.1| ATP synthase beta subunit [Ditta myricoides]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDSRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110348973|gb|ABG73058.1| ATP synthase beta chain [Marsilea mutica]
          Length = 388

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P   
Sbjct: 1   GRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 57

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 58  GGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 117

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 118 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 177

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 178 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 235

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 236 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 294

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 295 QDIIAILG 302


>gi|14718210|gb|AAK72843.1| ATP synthase beta subunit [Saxifraga mertensiana]
          Length = 483

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 83  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 139

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK  L+     +       +S+ G  G   
Sbjct: 140 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKXVLIMELINNIAKAHGGVSVFGGVGERT 199

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + 
Sbjct: 200 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 259

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 260 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 317

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 318 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 377

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 378 YETAQRVKQTLQRYKELQDIIAILG 402


>gi|312285287|gb|ADQ64385.1| ATP synthase beta subunit [Triclisia subcordata]
          Length = 469

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGASLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 204 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 263

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 264 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +D
Sbjct: 322 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQD 381

Query: 389 IRLIGG 394
           I  I G
Sbjct: 382 IIAILG 387


>gi|155029299|dbj|BAF75530.1| ATP synthase beta subunit [Droceloncia rigidifolia]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  S KE G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-ISTKE-GSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718076|gb|AAK72779.1| ATP synthase beta subunit [Humulus lupulus]
          Length = 496

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|4206606|gb|AAD11734.1| ATP synthase beta subunit [Glycosmis pentaphylla]
          Length = 487

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
                + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PAXTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|73990915|emb|CAJ28932.1| ATPase B subunit [Vitis vinifera]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|159232258|emb|CAJ80644.1| ATP synthase beta subunit [Nolana paradoxa]
          Length = 336

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 156/302 (51%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|113120261|gb|ABI30270.1| ATPase beta subunit [Harpanthus scutatus]
          Length = 452

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR    LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 65  ATLGRSFTVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 121

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 122 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 181

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF   
Sbjct: 182 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFXDINKQDVLLFIDNIFRFVQV 241

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 242 GSEVSALLGRMPSAVGYQPTLSTEMGTLHERI--TSTKEGSITSIQAVYVPADDLTDPAP 299

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 300 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 358

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 359 KELQDIIAILG 369


>gi|6689233|emb|CAB65417.1| ATP synthase beta subunit [Stylidium graminifolium]
          Length = 498

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|12004151|gb|AAG43915.1|AF213784_1 ATP synthase beta subunit [Primula gaubaeana]
          Length = 450

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 73  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 129

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 130 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGXDLPMEMKES 188

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 189 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 248

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 249 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 306

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 307 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQR 366

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 367 YKELQDIIAILG 378


>gi|20467355|gb|AAL27808.1| ATPase beta subunit [Zamia pumila]
          Length = 445

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 174/367 (47%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGQDTAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +I +F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 141 KIXLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESGVINEQ 199

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 200 DISRSKVALVYGQMNEPPXARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 259

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 260 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 317

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 318 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 376

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 377 DIIAILG 383


>gi|21633383|gb|AAM52166.1| ATP synthase beta subunit [Wilsonia backhousei]
          Length = 478

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTKTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 204

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 205 SGVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 264

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 265 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 323 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 382

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 383 RYKELQDIIAILG 395


>gi|16943656|emb|CAD10775.1| ATP synthase, beta subunit [Chlorogalum pomeridianum]
          Length = 494

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|5758857|gb|AAD50831.1| ATP synthase beta subunit [Bowiea volubilis]
          Length = 495

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NFGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085180|gb|AAX62994.1| ATP synthase beta subunit [Pimelodendron zoanthogyne]
          Length = 482

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYDTAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|30351897|emb|CAD48101.1| ATP synthase beta subunit [Schizocarphus nervosus]
          Length = 495

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20269396|gb|AAM17925.1| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 387

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 20/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           R+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G
Sbjct: 43  RIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRG 99

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE I+ Y+           
Sbjct: 100 GKIGLFGGAGVGKTVLIMELIINIAKAHGGVSVFGGVGERTREGIDLYMXMXESGVINEQ 159

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 160 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 219

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 220 SALLGRMPSAVGYQPTLSTEMGSLQERI--TXTKEGSITSIQAVYVPADDLTDPAPATTF 277

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 278 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQD 337

Query: 389 IRLIGG 394
           I  I G
Sbjct: 338 IIAILG 343


>gi|21633377|gb|AAM52163.1| ATP synthase beta subunit [Bonamia thunbergiana]
          Length = 490

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI V+D+  P
Sbjct: 103 ATLGRIFNVLGAPVD---NLGAVDTKTTSPIYRSAPAFIQLDTKLSIFETGINVVDLLAP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRV 219

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 220 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 397

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 398 ELQDIIAILG 407


>gi|24940174|emb|CAD43371.1| ATP synthase beta subunit [Cystostemon heliocharis]
          Length = 488

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|159232292|emb|CAJ80661.1| ATP synthase beta subunit [Hyoscyamus aureus]
 gi|159232320|emb|CAJ80675.1| ATP synthase beta subunit [Anisodus luridus]
 gi|159232322|emb|CAJ80676.1| ATP synthase beta subunit [Atropa belladonna]
          Length = 336

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 156/302 (51%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|159227356|emb|CAJ80469.1| ATP synthase beta subunit [Physochlaina physaloides]
 gi|159227358|emb|CAJ80470.1| ATP synthase beta subunit [Physochlaina physaloides]
 gi|159227360|emb|CAJ80471.1| ATP synthase beta subunit [Physochlaina physaloides]
 gi|159227362|emb|CAJ80472.1| ATP synthase beta subunit [Physochlaina physaloides]
 gi|159227364|emb|CAJ80473.1| ATP synthase beta subunit [Physochlaina physaloides]
 gi|159227366|emb|CAJ80474.1| ATP synthase beta subunit [Physochlaina physaloides]
 gi|159227368|emb|CAJ80475.1| ATP synthase beta subunit [Physochlaina physaloides]
 gi|159232200|emb|CAJ80615.1| ATP synthase beta subunit [Physochlaina physaloides]
          Length = 336

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 156/302 (51%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|7688433|emb|CAB89729.1| ATP synthase beta subunit [Xerosicyos danguyi]
          Length = 487

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPCFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|46360659|gb|AAS89111.1| ATP synthase beta subunit [Pellia sp. LLF-2004]
          Length = 382

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    + +  I    P           F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVNANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +       +S    VGER RE  +   +     +  
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSAFEGVGERTREGNDLYMEMKESKVIN 118

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    ++ P  R    LTA+T+AEY       +VLL +D+I RF  +  
Sbjct: 119 EQNFSESKVALVYGQMNDPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|331002603|ref|ZP_08326119.1| hypothetical protein HMPREF0491_00981 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330408331|gb|EGG87807.1| hypothetical protein HMPREF0491_00981 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 475

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 185/389 (47%), Gaps = 31/389 (7%)

Query: 59  LGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           LG++I IN D  ++ +     G  +             I  S    GR  N +GKPIDG 
Sbjct: 41  LGKIIEINGDKAVIQVFEGTDGMALRNTHTKLTGKPMEIGVSEAMFGRTFNGIGKPIDGL 100

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            ++ + + ++++  K    + R+      +TGI  ID    L  GQ++ +F+G+G+    
Sbjct: 101 GNV-EAEKTIDVNGKPLNPVTREYPRNYIRTGISAIDGLMTLIRGQKLPIFSGNGLPHDE 159

Query: 177 LLSMFARSDCF---DK------VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
           L +   R       DK      V+ + +G +  +V +F +    ++ +   V+       
Sbjct: 160 LAAQLVRQSSLGDTDKEDEKFAVVFAAMGVK-HDVADFFQRTFAESGVSDHVITFINLAN 218

Query: 227 SPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            P++ ++  P  A+++AEY +  KG ++L+IL  +T FA ++RE++++ GE+P  +G+P 
Sbjct: 219 DPVVERLITPKVALSVAEYLAFEKGMHILVILTDMTSFAEAMREVSSSKGEIPSRKGFPG 278

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            ++SEL  + ER G      G++T +  + +  D+   PI D    I +G IVL+R L  
Sbjct: 279 YLYSELATIYERAGIVSGVNGSVTQIPILTMPNDDITHPIPDLTGYITEGQIVLDRDLNG 338

Query: 345 EGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           +  YPP+  L S+SRL      +    AD + + + L     +  + R +  + G     
Sbjct: 339 QSIYPPISVLPSLSRLMKDGIGEGFTRADHQDVANQLFSSYSKVGDARALASVIGEDELS 398

Query: 400 D-----LILDKAVHQVPIIYDFLKQSPSD 423
           D     L+  KA  Q+     F+ QS +D
Sbjct: 399 DTDKQYLVFGKAFEQI-----FIGQSAND 422


>gi|241912878|gb|ACS72117.1| AtpB [Pelexia maculata]
          Length = 489

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|52082875|gb|AAU26018.1| ATPase beta subunit [Saururus chinensis]
          Length = 475

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|30351899|emb|CAD48102.1| ATP synthase beta subunit [Ledebouria sp. MP H641]
          Length = 495

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|5758879|gb|AAD50853.1| ATP synthase beta subunit [Eucharis x grandiflora]
          Length = 496

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|256828755|ref|YP_003157483.1| alternate F1F0 ATPase, F1 subunit beta [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577931|gb|ACU89067.1| alternate F1F0 ATPase, F1 subunit beta [Desulfomicrobium baculatum
           DSM 4028]
          Length = 509

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 149/293 (50%), Gaps = 11/293 (3%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           R+ +  G  ID        D+    + + PP + R+  +   F+TGI+VID+  P+  G 
Sbjct: 91  RMFDVFGNAID--RQAPPTDIQWRTVHRAPPVLARRSTKSEIFETGIKVIDVLVPIERGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218
           + G+F G+G+GK+ LL+    +       +S+   +GER RE  E + E      L   V
Sbjct: 149 KAGLFGGAGVGKTVLLTEMIHNMIGHHEGVSIFCGIGERCREGEELYREMKEAGVLPNMV 208

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++    +E P  R      A+T+AEYF   +  +VLL++D+I RF  +  E++   G++P
Sbjct: 209 MMFGQMNEPPGSRFRVGHAAMTMAEYFRDDEHRDVLLLIDNIFRFIQAGMEVSGLMGQMP 268

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +EL RL ERI  +  + G IT++ +V V  D+  DP A    S L   IV
Sbjct: 269 SRLGYQPTMGTELSRLEERI--ANTDAGAITSIQAVYVPADDLTDPAAVHTFSHLSASIV 326

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           L+R  A EG YP VD L S S++A           L   +   + ++E+ +DI
Sbjct: 327 LSRKQASEGLYPAVDLLQSSSKMATPGIVGKRHYGLAQEIRRTLAQYEQLKDI 379


>gi|113910784|gb|ABI48124.1| ATPase beta subunit [Calypogeia muelleriana]
          Length = 472

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   SLG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---SLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEQNISESKVASVYGQMNEPPGARMRVGLTAPTMAEYFRDINKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSASLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   V +R LA +G YP VDP  S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVSSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|61968297|gb|AAX57075.1| ATP synthase beta subunit [Poranthera corymbosa]
          Length = 479

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  S  ++G +T++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--SSTKEGFLTSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|7708466|emb|CAB89920.1| ATP synthase beta subunit [Krameria ixine]
          Length = 462

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 78  GVTLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPDFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   
Sbjct: 195 VINEKNLAESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|119350533|gb|ABL63217.1| AtpB [Floydiella terrestris]
          Length = 379

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 153/307 (49%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG    +  + I    P   +       F+TGI+V+D+  P   
Sbjct: 26  GRIFNVLGEPVD---NLGPVNTEEKLPIHRPAPAFTDLDTRLSIFETGIKVVDLLAPYRR 82

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LG 211
           G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +         
Sbjct: 83  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESRVIXE 142

Query: 212 DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIRE 268
           +NL   K   V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 143 ENLCGIKVAFVYGQMNEPPGARMRVGLTALTMAEYFRDMNKQDVLLFIDNIFRFVQAGSE 202

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP + + 
Sbjct: 203 VSALLGRMPSAVGYQPTLASEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPSSVAT 260

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R+LA +G YP VDPL S S +       DE       +   + R +E  
Sbjct: 261 FAHLDATTVLSRNLAAKGIYPAVDPLDSNSVMLQPYIVGDEHYSCAQRVKGTLQRLKELN 320

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 321 DIIAILG 327


>gi|16943739|emb|CAD10753.1| ATP synthase, beta subunit [Paradisea liliastrum]
          Length = 448

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G     P      GR
Sbjct: 5   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 64

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 65  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 121

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 122 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 181

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 182 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 241

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 242 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 300 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 359

Query: 390 RLIGG 394
             I G
Sbjct: 360 IAILG 364


>gi|4995792|emb|CAB44261.1| H(+)-transporting ATP synthase [Ruizia cordata]
          Length = 471

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|5758920|gb|AAD50894.1| ATP synthase beta subunit [Xanthorrhoea quadrangulata]
          Length = 496

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|114558|sp|P26531|ATPB_NICSP RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11766|emb|CAA43610.1| ATPase subunit beta [Nicotiana sp.]
          Length = 498

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L  +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLDAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|326803302|ref|YP_004321120.1| ATP synthase ab C terminal domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651245|gb|AEA01428.1| ATP synthase ab C terminal domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 477

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 164/346 (47%), Gaps = 45/346 (13%)

Query: 43  VCLGDFVVHQGKNSDN-LGQVIRI----------------NLDIVYICPVGIGEEISLGD 85
              GD V  +   SD  +GQ+I I                +LD  +    G G E+ LG 
Sbjct: 24  AAYGDIVRFRTNRSDQKVGQIITIEGEHALIQVFDSTTGMSLDNTHTQFTGKGMELGLGP 83

Query: 86  LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
            +               GR  N +G+PIDG  ++   ++S ++       ++R       
Sbjct: 84  DIL--------------GRTFNGIGQPIDGLGAI-HAEVSRDVNGAPLNPVSRIYPRDYI 128

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGRE 201
           +TG   ID  T L  GQ++ +F+G G+  + L +  A+     D  D     +    G  
Sbjct: 129 ETGFSAIDGLTTLIRGQKLPIFSGDGMPHNQLAAQIAKQAKLGDGVDGEFAVVFAAMG-- 186

Query: 202 VREFIEDYLGDNLKKS------VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           V+  + D+   + ++S       + V T+D+  + R + P  A+T AEY +   G +VL+
Sbjct: 187 VKHDVADFFKRSFEESGAMEHVTMFVNTADDPVMERLITPRMALTTAEYLAYDLGKHVLV 246

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  +T F  ++RE++    E+P  +GYP  ++SEL  + ER G  +  +G++T +  + 
Sbjct: 247 ILTDMTSFCEALREVSNAKQEIPSRKGYPGYLYSELATIYERAGIVKGRQGSVTQIPILT 306

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  D+   PI D    I +G +VL+RS+  +  YPP++PL S+SRL
Sbjct: 307 MPNDDITHPIPDLTGYITEGQVVLDRSIEGKNIYPPINPLPSLSRL 352


>gi|224830496|gb|ACN66343.1| ATP synthase beta chain [Carronia protensa]
          Length = 473

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 44  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 219

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 220 NIVESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 279

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 280 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 337

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +D
Sbjct: 338 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQD 397

Query: 389 IRLIGG 394
           I  I G
Sbjct: 398 IIAILG 403


>gi|37721017|gb|AAN32511.1| ATP synthase beta subunit [Lomandra longifolia]
          Length = 494

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7688427|emb|CAB89733.1| ATP synthase beta subunit [Vochysia rufescens]
          Length = 491

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|89257060|ref|YP_514422.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315416|ref|YP_764139.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503270|ref|YP_001429335.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009447|ref|ZP_02274378.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368299|ref|ZP_04984318.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
           257]
 gi|290953657|ref|ZP_06558278.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312974|ref|ZP_06803683.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica URFT1]
 gi|119367954|sp|Q2A1I0|ATPA_FRATH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122324598|sp|Q0BK82|ATPA_FRATO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201665|sp|A7NEH6|ATPA_FRATF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|89144891|emb|CAJ80236.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130315|gb|ABI83502.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254108|gb|EBA53202.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
           257]
 gi|156253873|gb|ABU62379.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 513

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 175/381 (45%), Gaps = 26/381 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VTAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVAT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            +   +   E+Y    ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++ D
Sbjct: 204 TIANIVRQLEEY--GAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYD 261

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEK 304
            +T+ A + R+I+      P    YP  VF    RLLER              G  + + 
Sbjct: 262 DLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKT 321

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A
Sbjct: 322 GSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAA 381

Query: 365 WSADEKKLVSSLTHLIHRFEE 385
            +   KKL   +   + ++ E
Sbjct: 382 QTKIIKKLGGGIRLALAQYRE 402


>gi|16943658|emb|CAD10752.1| ATP synthase, beta subunit [Anemarrhena asphodeloides]
          Length = 493

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004135|gb|AAG43907.1|AF213776_1 ATP synthase beta subunit [Aegiceras corniculatum]
          Length = 487

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|241912846|gb|ACS72101.1| AtpB [Exalaria parviflora]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDICTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708181|emb|CAB90031.1| ATP synthase beta subunit [Betula pendula]
          Length = 492

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|5758896|gb|AAD50870.1| ATP synthase beta subunit [Marantochloa atropurpurea]
          Length = 496

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|325126872|ref|YP_004286109.1| ATP synthase CF1 beta subunit [Fragaria vesca subsp. vesca]
 gi|324022784|gb|ADY15358.1| ATP synthase CF1 beta subunit [Fragaria vesca subsp. vesca]
          Length = 492

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|167762915|ref|ZP_02435042.1| hypothetical protein BACSTE_01279 [Bacteroides stercoris ATCC
           43183]
 gi|167699255|gb|EDS15834.1| hypothetical protein BACSTE_01279 [Bacteroides stercoris ATCC
           43183]
          Length = 506

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L     +  I  + P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDCTG-AYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  + + F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KK +                     ++    +E P  R+   L+ +T+AE F   G
Sbjct: 210 GEEFKKGMEEGHWDLSKVDYDEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   
Sbjct: 270 SESNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  ++   +  ++ R +E +DI
Sbjct: 388 HIVGQEHYEVAQRVKQILQRNKELQDI 414


>gi|91983091|gb|ABE68642.1| ATP synthase subunit B [Physocarpus opulifolius]
          Length = 482

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|75328434|sp|Q85V31|ATPB_SCHME RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351923|emb|CAD48409.1| ATP synthase beta subunit [Schnarfia messeniaca]
          Length = 495

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|142003|gb|AAA21991.1| ATP synthase subunit alpha [Nostoc sp. PCC 7120]
          Length = 506

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 172/381 (45%), Gaps = 21/381 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G EI  G  V   GR  +I       GR
Sbjct: 60  GTVGIAQNLEEDNVGAVL-----------MGEGREIQEGSTVTATGRIAQIGVGEALIGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG+ IDG   + K   S  I S  P  + R+ V +  +TGI  ID   P+  GQR 
Sbjct: 109 VVDALGRAIDGKGDI-KASESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRE 167

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+ + +         D V + + +G++   V   ++       +  +VVV 
Sbjct: 168 LIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVA 227

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + E   L+ +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    
Sbjct: 228 AGASEPATLQFLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGGEA 287

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG I L+
Sbjct: 288 YPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLS 347

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P V+P  SVSR+   A +   KK+   +   + +F+   D++    +   +
Sbjct: 348 SDLFNAGIRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFD---DLQAFAQFASDL 404

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      + +   + + LKQS
Sbjct: 405 DKATQDQLARGQRLRELLKQS 425


>gi|161784199|ref|YP_001595515.1| ATPase beta subunit [Lemna minor]
 gi|190358674|sp|A9L9A3|ATPB_LEMMI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|88696777|gb|ABD48502.1| ATPase beta subunit [Lemna minor]
          Length = 498

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +        D  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEDHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156622719|dbj|BAF76340.1| ATP synthase beta subunit [Asarum takaoi]
          Length = 484

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|75319564|sp|Q40612|ATPB_OCHNE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1430917|emb|CAA67541.1| subunit beta of ATPase [Ochrosphaera neapolitana]
          Length = 475

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 26/310 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D    LG    +  + I    P     +     F+TGI+V+D+  P   
Sbjct: 91  GRIFNVLGEPVD---ELGPCNAESGLPIHRPAPSFTELETKPSVFETGIKVVDLLAPYKR 147

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            
Sbjct: 148 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESKVID 206

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           ED L ++  K  +V    +E P  R    LTA+T+AEYF      +VLL +D I RF  +
Sbjct: 207 EDKLENS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDHIFRFVQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP  
Sbjct: 265 GSEVSALLGSMPSAVGYQPTLATEMGVLQERI--TSTNEGSITSIQAVYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +        E    +  +   + R++
Sbjct: 323 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPEIVGTEHYATAQRIKETLQRYK 382

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 383 ELQDIIAILG 392


>gi|46360669|gb|AAS89116.1| ATP synthase beta subunit [Frullania moniliata]
          Length = 381

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 161/310 (51%), Gaps = 28/310 (9%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           ++ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 3   KIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 59

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------E 207
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E
Sbjct: 60  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINE 118

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           + + D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 119 ENISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 176

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 177 SEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 234

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 235 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 293

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 294 ELQDIIAILG 303


>gi|4063560|gb|AAC98338.1| ATP synthase beta subunit [Rhus copallina]
          Length = 456

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       G+
Sbjct: 24  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGQ 83

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 84  IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 201 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 318

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 378

Query: 390 RLIGG 394
             I G
Sbjct: 379 IAILG 383


>gi|28849147|dbj|BAC65129.1| adenosine triphosphatase [Acetabularia acetabulum]
          Length = 491

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 18/306 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ +D   ++   D  + I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 96  GRIFNVLGETVDNLGTVEIKD-GLPIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 154

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 155 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVINEAN 214

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 215 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 274

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 275 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 332

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E +D
Sbjct: 333 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYNCAQNVKQTLQRYKELQD 391

Query: 389 IRLIGG 394
           I  I G
Sbjct: 392 IIAILG 397


>gi|295136979|ref|YP_003587525.1| ATP synthase CF1 beta subunit [Pisum sativum]
 gi|114560|sp|P05037|ATPB_PEA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|12148|emb|CAA27481.1| unnamed protein product [Pisum sativum]
 gi|293338551|gb|ADE43524.1| ATP synthase CF1 beta subunit [Pisum sativum]
          Length = 491

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTQLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +D+  I G
Sbjct: 399 KELQDMIAILG 409


>gi|253579149|ref|ZP_04856419.1| ATP synthase subunit alpha [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849247|gb|EES77207.1| ATP synthase subunit alpha [Ruminococcus sp. 5_1_39BFAA]
          Length = 509

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 7/342 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD 116
           + G    +  + V I   G  E I  G  V   G+    P      GRV+NALG+PIDG 
Sbjct: 59  SFGMAQNLEENSVSIVIFGSDENIGEGQTVKRTGKVVSVPVGDAMVGRVVNALGQPIDGA 118

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +    I SK P    R+ V +  +TGI+ ID   P+  GQR  +      GK+T
Sbjct: 119 GPIDTKEFR-PIESKAPGICERRSVYQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTT 177

Query: 177 LLS-MFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +         D + I + +G++   V   +E+   +  +  ++VV AT+ ES  L+ +
Sbjct: 178 IATDTIINQKGKDVICIYVAIGQKRSTVATLVENLTRNGAMDYTIVVAATASESSPLQYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF +KG +VL+I D +++ A + R ++      P    YP  VF    RL
Sbjct: 238 APYSGCAMGEYFMNKGKDVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER    + E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V
Sbjct: 298 LERAAKLDDEHGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMPAV 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +P  SVSR+   A     KK+  +L  +  ++ E +     G
Sbjct: 358 NPGISVSRVGGDAQIKAMKKVAGTLKLIYSQYRELQSFAQFG 399


>gi|126459312|ref|YP_001055590.1| V-type ATP synthase subunit B [Pyrobaculum calidifontis JCM 11548]
 gi|167016636|sp|A3MU07|VATB_PYRCJ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|126249033|gb|ABO08124.1| Sodium-transporting two-sector ATPase [Pyrobaculum calidifontis JCM
           11548]
          Length = 467

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 166/329 (50%), Gaps = 15/329 (4%)

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S G  V  +G+  +I  S    GR+++  G+P D        D   ++  +     +R+ 
Sbjct: 68  SKGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRDHMPLPPPEDFR-DVNGEPLNPYSREY 126

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISL 194
            E+  +TGI  ID    L  GQ++ +F+G+G+  + + +   R            V+   
Sbjct: 127 PEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNMMAAQVVRQSTVRGSGEEFAVVFVG 186

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNV 252
           +G +  E   F++++     L+++V V+  + +    R +AP   +TIAEY + + G +V
Sbjct: 187 IGIKTEEALFFMDEFRKTGALRRAVAVINLASDPVAERILAPRVGLTIAEYLAWQLGYHV 246

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+++  +T +   +RE+++  GELP  RGYP  ++++L  + ER G +  +KG++T    
Sbjct: 247 LVVMTDMTNYCEGLRELSSGKGELPGRRGYPGYMYTDLATIYERAGKAHGKKGSVTQFPI 306

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----A 367
           + +  D+   PI D    I +G +VL+R++  +G YPP D + S+SRLA  A        
Sbjct: 307 LTMPNDDITHPIPDLTGYITEGQLVLSRAMWGKGIYPPFDVIMSLSRLAKDAIGEGKTRE 366

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           D K + ++L     +  E R++  + G R
Sbjct: 367 DHKDVANTLIAAYSKALELRNLATLVGER 395


>gi|30351869|emb|CAD48087.1| ATP synthase beta subunit [Bowiea volubilis]
          Length = 498

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 107 GATLGRIFNVLGEPVD---NFGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 163

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 164 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 223

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 224 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 283

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 284 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 342 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 401

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 402 KELQDIIAILG 412


>gi|16943757|emb|CAD10769.1| atp synthase, beta subunit [Herreria montevidensis]
          Length = 498

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912908|gb|ACS72132.1| AtpB [Sauroglossum corymbosum]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|228017396|gb|ACP52213.1| ATP synthase CF1 beta subunit [Larix occidentalis]
          Length = 487

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 30/320 (9%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 216

Query: 217 SVVVVATS-------------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+   S             +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 217 SGVINEQSISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 276

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTD 334

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  +  D   V +R LA +G YP VDPL S S +  + W   E+  ++   +   +
Sbjct: 335 PAPATTFAHSDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTL 393

Query: 381 HRFEETRDIRLIGGYRPGVD 400
            R++E +DI  I    PG+D
Sbjct: 394 QRYKELQDIIAI----PGLD 409


>gi|29726136|gb|AAD00594.2| ATP synthase beta subunit [Argemone mexicana]
          Length = 490

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GAALGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7687960|emb|CAB89700.1| ATP synthase beta subunit [Austrobaileya scandens]
          Length = 498

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6017836|gb|AAF01652.1| ATP synthase beta subunit [Saururus cernuus]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|11034793|gb|AAG27085.1| ATP synthase beta subunit [Saururus cernuus]
 gi|33327773|gb|AAQ09250.1| ATP synthase beta subunit [Stewartia pseudocamellia]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|5758917|gb|AAD50891.1| ATP synthase beta subunit [Tapeinochilos ananassae]
          Length = 496

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPLDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912838|gb|ACS72097.1| AtpB [Chloraea reticulata]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|187763109|ref|YP_001876584.1| ATP synthase CF1 beta subunit [Welwitschia mirabilis]
 gi|163311639|gb|ABY26797.1| ATP synthase CF1 beta subunit [Welwitschia mirabilis]
 gi|220983452|dbj|BAH11221.1| ATP synthase CF1 beta chain [Welwitschia mirabilis]
          Length = 483

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + D +  I    P           F+TGI+V+D+  P
Sbjct: 102 ATLGRIFNVLGEPVD---NLGPVETDKTSPIHRSAPTFPELDTNLAIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKQSGV 218

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+ +AEYF      +VLL +D+I RF  +
Sbjct: 219 INEKNITESKVALVYGQMNEPPGARMRVGFTALAMAEYFRDVNKQDVLLFIDNIFRFVQA 278

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             EI+   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP  
Sbjct: 279 GSEISALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSVQAVYVPADDLTDPAP 336

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 337 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQGVKQTLQRYK 396

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 397 ELQDIITILG 406


>gi|14718191|gb|AAK72834.1| ATP synthase beta subunit [Portulaca grandiflora]
          Length = 380

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 26/309 (8%)

Query: 104 RVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 1   RIXNVLGEPVD---NLGPVDTSXTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 57

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------E 207
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            E
Sbjct: 58  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINE 116

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +G++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 117 QNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRXVNEQDVLLFIDNIFRFVQAG 174

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 175 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 232

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 233 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 292

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 293 LQDIIAILG 301


>gi|14717990|gb|AAK72737.1| ATP synthase beta subunit [Carya glabra]
          Length = 483

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|37720955|gb|AAN32480.1| ATP synthase beta subunit [Ananas comosus]
          Length = 490

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004137|gb|AAG43908.1|AF213777_1 ATP synthase beta subunit [Lysimachia maxima]
          Length = 482

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|27435914|gb|AAO13287.1| ATP synthase beta subunit [Welwitschia mirabilis]
          Length = 461

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + D +  I    P           F+TGI+V+D+  P
Sbjct: 80  ATLGRIFNVLGEPVD---NLGPVETDKTSPIHRSAPTFPELDTNLAIFETGIKVVDLLAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 137 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKQSGV 196

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+ +AEYF      +VLL +D+I RF  +
Sbjct: 197 INEKNITESKVALVYGQMNEPPGARMRVGFTALAMAEYFRDVNKQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             EI+   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP  
Sbjct: 257 GSEISALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSVQAVYVPADDLTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQGVKQTLQRYK 374

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 375 ELQDIITILG 384


>gi|113910834|gb|ABI48149.1| ATPase beta subunit [Metzgeria conjugata]
          Length = 472

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    ++   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPVNAVTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDXNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|56675895|emb|CAB89929.2| ATP synthase beta subunit [Asparagus officinalis]
          Length = 487

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|4995761|emb|CAB44253.1| H(+)-transporting ATP synthase [Paramelhania decaryana]
          Length = 483

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|46360657|gb|AAS89110.1| ATP synthase beta subunit [Calycularia crispula]
          Length = 382

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDTGITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 59  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 117

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 118 NEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 177

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 294

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 295 ELQDIIAILG 304


>gi|5758866|gb|AAD50840.1| ATP synthase beta subunit [Costus barbatus]
          Length = 496

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62902849|gb|AAY19339.1| ATP synthase beta subunit [Anisophyllea fallax]
          Length = 483

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYGTAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|332105871|gb|AEE01398.1| ATP synthase beta chain [Dombeya calantha]
          Length = 479

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|241912904|gb|ACS72130.1| AtpB [Sarcoglottis acaulis]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|124361800|gb|ABN09342.1| ATP synthase beta subunit [Tetraclis cf. clusiifolia RNF 959]
          Length = 465

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|61968255|gb|AAX57054.1| ATP synthase beta subunit [Lachnostylis bilocularis]
 gi|61968257|gb|AAX57055.1| ATP synthase beta subunit [Leptopus cordifolius]
 gi|61968259|gb|AAX57056.1| ATP synthase beta subunit [Leptopus colchicus]
          Length = 479

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKES 207

Query: 218 VVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 208 GVINEANIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIIAILG 397


>gi|14718072|gb|AAK72777.1| ATP synthase beta subunit [Heteropyxis natalensis]
          Length = 445

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 59  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 115

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 116 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 175

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 176 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 235

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 236 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 293

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 294 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 353

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 354 KELQDIIAILG 364


>gi|14718195|gb|AAK72836.1| ATP synthase beta subunit [Puya raimondii]
          Length = 488

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633417|gb|AAM52183.1| ATP synthase beta subunit [Jacquemontia reclinata]
          Length = 486

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 98  GSTLGRIFNVLGEPVD---NLGPVDTKITSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 214 GVINEEKIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 271

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 272 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 329

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   +
Sbjct: 330 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTL 389

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 390 QRYKELQDIIAILG 403


>gi|4995852|emb|CAB44285.1| H(+)-transporting ATP synthase [Trochetiopsis erythroxylon]
          Length = 485

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|7708258|emb|CAB90051.1| ATP synthase beta subunit [Clidemia petiolaris]
          Length = 463

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PXRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 197 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|5758862|gb|AAD50836.1| ATP synthase beta subunit [Chlorophytum comosum]
          Length = 495

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|27435901|gb|AAO13279.1| ATP synthase beta subunit [Schisandra chinensis]
          Length = 483

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|108802650|ref|YP_636306.1| ATP synthase CF1 beta subunit [Eucalyptus globulus subsp. globulus]
 gi|118573535|sp|Q49KZ1|ATPB_EUCGG RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|60460816|gb|AAX21036.1| ATP synthase CF1 beta subunit [Eucalyptus globulus subsp. globulus]
          Length = 498

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912844|gb|ACS72100.1| AtpB [Cranichis ciliata]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDICTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|241912832|gb|ACS72094.1| AtpB [Altensteinia fimbriata]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|212896606|gb|ACJ38506.1| membrane-bound ATP synthase subunit B [Pueraria montana var.
           lobata]
          Length = 470

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 87  GATLGRIFNVLGEPIDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 146 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 205

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 206 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 324 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|42558436|gb|AAS19927.1| ATP synthase beta chain [Polypodium glycyrrhiza]
          Length = 422

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 31/338 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVRSSVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     + 
Sbjct: 131 RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 189

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 190 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 249

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 250 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 307

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 308 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 366

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 367 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 400


>gi|33318661|gb|AAQ05214.1| ATP synthase beta subunit [Cycas revoluta]
          Length = 486

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 212 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|7708642|emb|CAB90008.1| ATP synthase beta subunit [Schima superba]
          Length = 482

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               G++ N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 95  GATLGQIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|62085147|gb|AAX62979.1| ATP synthase beta subunit [Hybanthus sp. Alford 89]
          Length = 485

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTIGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|224830574|gb|ACN66382.1| ATP synthase beta chain [Sciadotenia toxifera]
          Length = 487

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|157689156|gb|ABV65134.1| ATP synthase CF1 beta subunit [Gunnera manicata]
          Length = 501

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708306|emb|CAB90080.1| ATP synthase beta subunit [Fuchsia procumbens]
          Length = 456

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 70  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 126

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 127 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 186

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 187 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 246

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 364

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 365 KELQDIIAILG 375


>gi|75330424|sp|Q8MBG0|ATPB_CUSJA RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633457|gb|AAM52203.1| ATP synthase beta subunit [Cuscuta japonica]
          Length = 490

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D   P 
Sbjct: 102 GSTLGRIFNVLGEPVDNFGPVDTNTTST-IHRSAPAFIQLDTKLSIFETGIKVVDFLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NENNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQKVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|4995107|emb|CAB44017.1| H(+)-transporting ATP synthase [Eriolaena spectabilis]
          Length = 482

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|241912914|gb|ACS72135.1| AtpB [Spiranthes spiralis]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIKLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|298530316|ref|ZP_07017718.1| ATP synthase F1, beta subunit [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509690|gb|EFI33594.1| ATP synthase F1, beta subunit [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 469

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 164/308 (53%), Gaps = 9/308 (2%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR++N +G+P+D    + K D    I    P  + +    +  +TG++VI
Sbjct: 84  IRVPVGKPTLGRILNVVGRPVDEQGPV-KADKYYPIHRPAPSFVEQSTSIEILETGVKVI 142

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY 209
           D+  P   G ++G+F G+G+GK+ +L     +   +   IS+   VGER RE  +   + 
Sbjct: 143 DLMIPFPKGGKMGMFGGAGVGKTVVLMEMINNIAKNHGGISVFAGVGERTREGNDLYHEM 202

Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
           +    + K+ ++    +E P  R    LTA+T AEY+   +  +VLL +D+I RF  +  
Sbjct: 203 IDAGVIDKAALIYGQMNEPPGARARVGLTALTAAEYYRDEENQDVLLFIDNIFRFTQAGT 262

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V  D+  DP   +
Sbjct: 263 EVSALLGRMPSAVGYQPTLATDLGALQERI--TSTDKGSITSVQAIYVPADDLTDPSPAT 320

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEET 386
             + LDG IVL+R +AE G YP VDPL S SR+ D    + E   V+    +I  ++++ 
Sbjct: 321 TFAHLDGTIVLSRPIAELGIYPAVDPLDSTSRVLDPNVISQEHYSVAREVQMILQKYKDL 380

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 381 QDIIAILG 388


>gi|159232260|emb|CAJ80645.1| ATP synthase beta subunit [Nolana humifusa]
          Length = 336

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 156/301 (51%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|9799480|gb|AAF98990.1| ATP synthase beta subunit [Crassula aff. perforata Fishbein 3778]
          Length = 487

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G ++  I    P  +        F+TGI+V+D+  P 
Sbjct: 95  GATLGRIFNVLGEPVDNLGPVDTG-ITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 213

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + + LL +D+I RF  + 
Sbjct: 214 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDXLLFIDNIFRFVQAG 273

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 274 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAPA 331

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 332 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 391

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 392 LQDIIAILG 400


>gi|4206580|gb|AAD11721.1| ATP synthase beta subunit [Diplolaena dampieri]
          Length = 480

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|312285217|gb|ADQ64350.1| ATP synthase beta subunit [Curarea candicans]
          Length = 469

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 204

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 205 IVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 265 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +DI
Sbjct: 323 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDI 382

Query: 390 RLIGG 394
             I G
Sbjct: 383 IAILG 387


>gi|241912840|gb|ACS72098.1| AtpB [Cranichis longipetiolata]
          Length = 489

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDICTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718271|gb|AAK72873.1| ATP synthase beta subunit [Zostera noltii]
          Length = 477

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 91  GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPTFIQLDTKLSIFETGIKVVDLLAPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI-------- 206
             G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +          
Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINXIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 208

Query: 207 --EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
             +D + ++  K  +V    +E P  R    LTA+T+AZYF    + +VLL +D+I RF 
Sbjct: 209 INKDKIAES--KVALVYGQMNEPPGARMRVGLTALTMAZYFRDINEQDVLLFIDNIFRFV 266

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 267 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDP 324

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
                 + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 325 APAXTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQRVKETLQ 383

Query: 382 RFEETRDIRLIGG 394
           R +E +DI  I G
Sbjct: 384 RNKELQDIIAILG 396


>gi|7708145|emb|CAB89976.1| ATP synthase beta subunit [Anagallis tenella]
          Length = 484

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G     P      GR
Sbjct: 40  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDIGAALSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|6467941|gb|AAF13240.1|AF197607_1 ATPase beta subunit [Kadsura japonica]
          Length = 487

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|6017842|gb|AAF01655.1| ATP synthase beta subunit [Simmondsia chinensis]
          Length = 480

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D        +  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRXXSPXHRSAPAFTQLDTKLSXFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSNEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|5001571|gb|AAD37032.1|AF092106_1 ATP synthase beta subunit [Aristolochia tomentosa]
          Length = 485

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 94  LGRIXNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 150

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 151 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 210

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 211 EQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 270

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 271 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 328

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E 
Sbjct: 329 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKEL 388

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 389 QDIIAILG 396


>gi|4063524|gb|AAC98320.1| ATP synthase beta subunit [Aesculus pavia]
          Length = 456

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +V+L +D+I RF  
Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVILFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|241912848|gb|ACS72102.1| AtpB [Cyclopogon peruvianus]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|257125544|ref|YP_003163658.1| V-type ATP synthase subunit B [Leptotrichia buccalis C-1013-b]
 gi|257049483|gb|ACV38667.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Leptotrichia buccalis C-1013-b]
          Length = 459

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGD-LVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           G+V+ +N D   +        I+L D  V   GR   +  S    GRV + LG+P D   
Sbjct: 42  GRVLEVNGDKAVVQLFENSAGINLKDSKVRFLGRPLSLGVSEDMIGRVFDGLGRPKDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   + +++I       + R    +  +TG+  ID    L  GQ++ +F+GSG+  + L
Sbjct: 102 KIIP-EKTLDINGTAINPVARDYPSEFIQTGVSAIDGLNTLVRGQKLPIFSGSGLPHAEL 160

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
               AR      +D    V+   +G    E + F ED++    + ++V+ +  +++  I 
Sbjct: 161 ALQIARQAKVLGTDSKFAVVFGAIGITFEEAQTFTEDFIKTGAIDRAVLFMNLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +  ++RE++    E+P  RGYP  ++++
Sbjct: 221 RLSTPKMALTCAEYLAFEKGMHVLVILTDLTNYCEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  + ER G  +  +G+IT +  + +  D+   PI D    I +G I+L+R L ++   P
Sbjct: 281 LSTIYERAGRIKGREGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKQNLMP 340

Query: 350 PVDPLASVSRLADKA 364
           P++ L S+SRL DK 
Sbjct: 341 PINVLPSLSRLKDKG 355


>gi|52082883|gb|AAU26022.1| ATPase beta subunit [Gymnotheca chinensis]
          Length = 476

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|7708323|emb|CAB90090.1| ATP synthase beta subunit [Haloragis aspera]
          Length = 466

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 81  GVTLGRIFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R     TA+T+AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEQNIAESXVXLVYXQMNEPPGARMRVGXTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|4063562|gb|AAC98339.1| ATP synthase beta subunit [Ruta graveolens]
          Length = 456

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQRVKETLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|5758861|gb|AAD50835.1| ATP synthase beta subunit [Canna tuerckheimii]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|34582341|sp|Q9MTX9|ATPB_SCHSP RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688039|emb|CAB89724.1| ATP synthase beta subunit [Schisandra sphenanthera]
          Length = 498

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|296936678|gb|ADH94350.1| ATP synthase CF1 beta subunit [Syzygium cumini]
          Length = 498

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912920|gb|ACS72138.1| AtpB [Stenorrhynchos speciosum]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|37720987|gb|AAN32496.1| ATP synthase beta subunit [Molineria capitulata]
          Length = 497

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|37721027|gb|AAN32516.1| ATP synthase beta subunit [Yucca glauca]
          Length = 494

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004155|gb|AAG43917.1|AF213786_1 ATP synthase beta subunit [Primula cortusoides]
          Length = 464

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTXTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLXMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|14718171|gb|AAK72824.1| ATP synthase beta subunit [Petrosavia stellaris]
          Length = 483

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|66276257|gb|AAY44143.1| ATP synthase beta subunit [Begonia herbacea]
          Length = 479

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   + G  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GTTLGRIFNVLGEPID---NFGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|259046441|ref|ZP_05736842.1| V-type sodium ATPase, B subunit [Granulicatella adiacens ATCC
           49175]
 gi|259036914|gb|EEW38169.1| V-type sodium ATPase, B subunit [Granulicatella adiacens ATCC
           49175]
          Length = 458

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 162/318 (50%), Gaps = 17/318 (5%)

Query: 60  GQVIRINLDI----VYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID- 114
           GQV+ +N D     ++  P GI   I    + F      ++ S    GR+ + +G  +D 
Sbjct: 42  GQVLEVNEDKAMVQIFEGPSGIN--IRDTKVRFRGKPLSLNVSEDMIGRIFDGMGNVMDD 99

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G + L +  L +   +  P  ++R   ++  +TGI  ID    L  GQ++ VF+GSG+  
Sbjct: 100 GPEILPEATLDVNGQAINP--VSRDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPH 157

Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             L +  AR      SD    V+ + +G    E   F+ED+     + +SV+ +  + + 
Sbjct: 158 KELAAQIARQATVLNSDEKFAVVFAAMGITFDEAEYFMEDFRKTGAIDRSVMFLNLASDP 217

Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
            I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+    E+P  RGYP  +
Sbjct: 218 AIERIATPKIALTTAEYLAFEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYL 277

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           ++ L  + ER G    + G++T +  + +  D+   PI D    I +G I+L+R+L ++G
Sbjct: 278 YTNLSTIYERAGRIVGKPGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILDRALDKQG 337

Query: 347 RYPPVDPLASVSRLADKA 364
             PP++ L S+SRL DK 
Sbjct: 338 IQPPINVLPSLSRLKDKG 355


>gi|194132105|gb|ACF33359.1| ATP synthase CF1 beta subunit [Gonystylus bancanus]
          Length = 498

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|118431025|ref|NP_147204.2| V-type ATP synthase subunit B [Aeropyrum pernix K1]
 gi|150421703|sp|Q9YF36|VATB_AERPE RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|116062352|dbj|BAA79360.2| V-type ATP synthase subunit B [Aeropyrum pernix K1]
          Length = 463

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 147/286 (51%), Gaps = 10/286 (3%)

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V   GR   I  +    GR++N LG+PIDG   +   +      + + PA  R   E
Sbjct: 70  GTVVRFMGRPLEIPVTEDMLGRIMNGLGEPIDGGPKIDADERRDVNGAPLNPA-ERAYPE 128

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196
              +TG+  ID    L  GQ++ +F+G+G+  + L +  AR            V+ S +G
Sbjct: 129 DFIQTGVSAIDGMNTLVRGQKLPIFSGAGLPHNRLAAQIARQATVRGEEEEFAVVFSAIG 188

Query: 197 -ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLL 254
            +    +           L +  + V  +DE  ++R + P  A+T+AEY + + D +VL+
Sbjct: 189 IKYDDFLFFKKFFEETGALGRVAMFVNLADEPAMIRLITPRAALTLAEYLAYERDMHVLV 248

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           I+  +T +A ++REI+    E+P  +GYP  ++S+L  + ER G  + +KG+IT +  + 
Sbjct: 249 IITDMTNYAEALREISAAREEVPGRQGYPGYLYSDLASIYERAGRVKGKKGSITQMPILT 308

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  D+   PI D    I +G IVL+R L   G YPP++ L S+SRL
Sbjct: 309 MPNDDITHPIPDLTGYITEGQIVLSRELHNRGIYPPINVLMSLSRL 354


>gi|17224743|gb|AAL37093.1| ATP synthase beta subunit [Dioscorea communis]
          Length = 483

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +     R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQKVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|7578491|gb|AAF64068.1|AF132886_1 ATP synthase, B subunit [Kerria japonica]
          Length = 495

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|312285277|gb|ADQ64380.1| ATP synthase beta subunit [Tiliacora acuminata]
          Length = 467

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 204

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 205 IVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 265 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +DI
Sbjct: 323 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDI 382

Query: 390 RLIGG 394
             I G
Sbjct: 383 IAILG 387


>gi|312285179|gb|ADQ64331.1| ATP synthase beta subunit [Albertisia laurifolia]
 gi|312285181|gb|ADQ64332.1| ATP synthase beta subunit [Albertisia porcata]
 gi|312285197|gb|ADQ64340.1| ATP synthase beta subunit [Beirnaertia cabindensis]
 gi|312285203|gb|ADQ64343.1| ATP synthase beta subunit [Carronia protensa]
 gi|312285209|gb|ADQ64346.1| ATP synthase beta subunit [Chondrodendron tomentosum]
 gi|312285263|gb|ADQ64373.1| ATP synthase beta subunit [Sciadotenia amazonica]
 gi|312285265|gb|ADQ64374.1| ATP synthase beta subunit [Sciadotenia toxifera]
 gi|312285285|gb|ADQ64384.1| ATP synthase beta subunit [Triclisia dictyophylla]
          Length = 469

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 204 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 263

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 264 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +D
Sbjct: 322 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQD 381

Query: 389 IRLIGG 394
           I  I G
Sbjct: 382 IIAILG 387


>gi|302669538|ref|YP_003829498.1| ATP synthase F1 alpha subunit AtpA1 [Butyrivibrio proteoclasticus
           B316]
 gi|302394011|gb|ADL32916.1| ATP synthase F1 alpha subunit AtpA1 [Butyrivibrio proteoclasticus
           B316]
          Length = 506

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 157/336 (46%), Gaps = 9/336 (2%)

Query: 66  NLDIVYICPVGIGEE--ISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122
           NL+   +  V  GE+  IS G  V   GR    P      GRV+NA+G+PIDG   +   
Sbjct: 65  NLEETVVSAVLFGEDVGISEGQTVKRTGRVVSVPVGEQMIGRVVNAIGQPIDGQGPIEAS 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
           +    + S  P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+T+ +   
Sbjct: 125 EYR-PVESPAPGIIARQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIAVDTI 183

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAV 239
                 D + I + +G++   V   +ED   G  +  ++VV AT+ E   L+ ++P T  
Sbjct: 184 LNQKGKDVICIYVAIGQKRSTVTSLVEDLKKGGAMDYTIVVAATASEPSPLQYISPYTGC 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF  KG +VL I D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 244 AMGEYFMHKGKHVLCIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P  SV
Sbjct: 304 LSDENGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMPAVNPGISV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           SR+   A     KK+  +L  +  ++ E +     G
Sbjct: 364 SRVGGNAQIKAMKKVAGTLKLVYSQYRELQSFAQFG 399


>gi|295136904|ref|YP_003587736.1| ATP synthase CF1 beta subunit [Lathyrus sativus]
 gi|293338626|gb|ADE43598.1| ATP synthase CF1 beta subunit [Lathyrus sativus]
          Length = 491

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 176/365 (48%), Gaps = 31/365 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSA 99
           ++ QG+  D +GQ IR+  ++  +        +++          +++       +    
Sbjct: 47  LIVQGR--DTVGQQIRVTCEVQRLLGNNRARAVAMSATDGLKRGMEVIDTGAALSVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTQLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDI 389
           E +D+
Sbjct: 400 ELQDM 404


>gi|241912912|gb|ACS72134.1| AtpB [Spiranthes romanzoffiana]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIKLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|241912866|gb|ACS72111.1| AtpB [Manniella cypripedioides]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|311745476|ref|ZP_07719261.1| ATP synthase F1, beta subunit [Algoriphagus sp. PR1]
 gi|126578029|gb|EAZ82249.1| ATP synthase F1, beta subunit [Algoriphagus sp. PR1]
          Length = 500

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG   + +G   + I    P   +     +   TGI+VID+  P   G 
Sbjct: 88  GRLFNVVGEAIDGLPKIPEGK-RLPIHRSAPKFEDLSTSTEVLFTGIKVIDLIEPYAKGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE IE  +   G+
Sbjct: 147 KIGLFGGAGVGKTVLIQELINNIAKAYAGLSVFAGVGERTREGNDLLREMIESGIVTYGE 206

Query: 213 NL----------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245
           +                        K+  V    +E P  R    LT +T+AEY+     
Sbjct: 207 DFVHSLEEEGGWDLSKVDLKKLEDSKATFVFGQMNEPPGARARVALTGLTLAEYYRDGDG 266

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G
Sbjct: 267 EGAGKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 324

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD    L+R +AE G YP VDPL S SR+     
Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTSLSRKIAELGIYPAVDPLESSSRIMSADI 384

Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             +E       +  ++ R++E +DI  I G
Sbjct: 385 IGEEHYNCAQRVKEILQRYKELQDIIAILG 414


>gi|113910854|gb|ABI48159.1| ATPase beta subunit [Bryoxiphium norvegicum]
          Length = 472

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGEPVD---NLGPIDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  +  D   VL+R LA +G YP VDPL   S +       +E  +    +   + R++
Sbjct: 318 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDPTSTMLQPRIVGEEHYETAQGVKQTLQRYK 377

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 378 ELQDIIAILG 387


>gi|222099895|ref|YP_002534463.1| V-ATPase B-subunit [Thermotoga neapolitana DSM 4359]
 gi|254764992|sp|B9K814|VATB_THENN RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|24298776|dbj|BAC22096.1| V-ATPase B-subunit [Thermotoga neapolitana]
 gi|221572285|gb|ACM23097.1| V-ATPase B-subunit [Thermotoga neapolitana DSM 4359]
          Length = 460

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 164/318 (51%), Gaps = 21/318 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGK--GDLSMEIM-SKVPPAMNRQRVEKGFKTGI 149
             +S S    GR ++ LGKP    D+LG+   + +++I  S + P+  R+      +TGI
Sbjct: 78  LEVSLSPDLLGRTLDGLGKP---RDNLGEIVPEKTVDINGSPINPSA-REYPRNFIQTGI 133

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----VIISLVGERGREVRE 204
             ID+   L  GQ++ +FAG+G+  + L    AR           V+ + +G R ++   
Sbjct: 134 SSIDVLMTLIRGQKLPIFAGNGLPYNRLAVQIARQAKVTTEEEFAVVFAAIGLR-KDDAN 192

Query: 205 FIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITR 261
           FI   L ++  +K  VVV+  + +S   R   P  A+TIAEY +   G +VL+IL+ +T 
Sbjct: 193 FIVRSLEESGAIKNMVVVLNLASDSVAERIATPRVALTIAEYLAFDLGMHVLVILNDMTN 252

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +  ++RE++   GE+P  +GYP  ++S+L  + ER G  +   G+IT +  + +  D+  
Sbjct: 253 YCEALRELSNYRGEVPGRKGYPGYLYSDLASIYERAGIIKGRSGSITQIPILTMPNDDIT 312

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSL 376
            PI D    I +G IV++RSL  +G YPP+D L+S+SRL      +     D   + S L
Sbjct: 313 HPIPDLTGYITEGQIVMSRSLFGKGIYPPIDILSSLSRLMKDGIGEGYTREDHPDVASQL 372

Query: 377 THLIHRFEETRDIRLIGG 394
                R  E R I  I G
Sbjct: 373 FSAYSRVMEVRSIASIVG 390


>gi|268323123|emb|CBH36711.1| V-type ATP synthase, subunit B [uncultured archaeon]
 gi|268326063|emb|CBH39651.1| V-type ATP synthase, subunit B [uncultured archaeon]
          Length = 464

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 17/348 (4%)

Query: 57  DNLGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID 114
           + +GQV+  R  L ++ +     G + S   + F     R+S +    GR  + LG+PID
Sbjct: 44  EKMGQVLEARKGLAVIQVFEGTSGIDTSKTRVRFTGDIMRVSVAQDMVGRFFDGLGRPID 103

Query: 115 GDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           G   +   D LS+   +  P A +  R  +  +TGI  ID    L  GQ++ +F+G+G+ 
Sbjct: 104 GGPEVIPEDRLSITGEAINPTARDYPR--EFIQTGISTIDGMNTLVRGQKLPIFSGAGMP 161

Query: 174 KSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSD 225
            + L +  AR        + F  V+ + +G    E   F+ D+     +++ V  +  +D
Sbjct: 162 HNALAAQIARQAKVLTSGEPF-SVVFAAMGITHEEASFFMHDFERTGAIERIVAFLNLAD 220

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R + P  A+T AE+ + + D ++L+IL  +T +  ++REIA    E+P  RGYP 
Sbjct: 221 DPAIERVITPRMALTTAEFLAYEYDMHILVILTDMTNYCEALREIAAAREEVPGRRGYPG 280

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            ++++L    ER G  +   G IT +  + +  D+   PI D    I +G  VL+R L  
Sbjct: 281 YMYTDLSMNYERAGRIKGRNGTITQIPILSMPDDDITHPIPDLTGYITEGQFVLSRDLHR 340

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETRDIR 390
            G +PPVD L S+SRL ++    +  +   S     L   + E RD+R
Sbjct: 341 RGIFPPVDVLPSLSRLMNEGIGPERTREDHSGVSNQLYAGYAEGRDMR 388


>gi|212896624|gb|ACJ38515.1| membrane-bound ATP synthase subunit B [Macroptilium atropurpureum]
          Length = 469

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVETRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|158602287|gb|ABW74610.1| ATP synthase beta subunit [Ranunculus hispidus]
          Length = 497

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|37720961|gb|AAN32483.1| ATP synthase beta subunit [Hydrothrix gardneri]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708276|emb|CAB90063.1| ATP synthase beta subunit [Dischidia lanceolata]
          Length = 490

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 217

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 218 SGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 277

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  D
Sbjct: 278 VQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTD 335

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 336 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQ 395

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 396 RYKELQDIIAILG 408


>gi|5758885|gb|AAD50859.1| ATP synthase beta subunit [Heliconia indica]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|313183829|ref|YP_004021672.1| ATP synthase CF1 beta subunit [Prunus persica]
 gi|309321441|gb|ADO64982.1| ATP synthase CF1 beta subunit [Prunus persica]
          Length = 492

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912880|gb|ACS72118.1| AtpB [Platythelys querceticola]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+G++ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6688636|emb|CAB65223.1| ATP synthase beta subunit [Melanophylla alnifolia]
          Length = 498

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 170/363 (46%), Gaps = 25/363 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN+GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDNVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ 
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGG 394
           I G
Sbjct: 407 ILG 409


>gi|14718124|gb|AAK72801.1| ATP synthase beta subunit [Melanophylla alnifolia]
          Length = 494

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 170/363 (46%), Gaps = 25/363 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN+GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 46  KGRDNVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 105

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 106 IFNVLGEPVDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 164

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ 
Sbjct: 165 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 224

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++  
Sbjct: 225 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 284

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 285 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 342

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI  
Sbjct: 343 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 402

Query: 392 IGG 394
           I G
Sbjct: 403 ILG 405


>gi|17224778|gb|AAL37110.1| ATP synthase beta subunit [Pentastemona sumatrana]
          Length = 497

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+TIAEYF    + +VLL +D+I RF  
Sbjct: 220 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|305671665|gb|ADM63142.1| ATP synthase beta subunit [Linnaea borealis]
          Length = 479

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|123325705|gb|ABM74477.1| ATP synthase beta subunit [Oxanthera neocaledonica]
          Length = 461

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +       F+TGI+V D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLXTRLSIFETGIKVXDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNXAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL ++ V  V    +E P  R    LTA+T+AEYF    + ++LL +B+I RF  
Sbjct: 202 VINDQNLSETKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEXDJLLFIBNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPXAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|159161266|ref|YP_001542544.1| ATP synthase CF1 beta subunit [Cuscuta exaltata]
 gi|190358663|sp|A8W3D7|ATPB_CUSEX RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|158938691|gb|ABW83708.1| ATP synthase CF1 beta subunit [Cuscuta exaltata]
          Length = 490

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 102 GSTLGRIFNVLGEPVDNFGPVDTNTTST-IHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 221 NEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQKVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|124361798|gb|ABN09341.1| ATP synthase beta subunit [Tetraclis baroni]
          Length = 465

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|16416762|gb|AAL18404.1|AF313558_1 ATP synthase beta chain [Cycas revoluta]
          Length = 394

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 4   GATLGRIFNVIGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 60

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 61  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 119

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 120 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 179

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 180 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 237

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 238 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 296

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 297 RYKELQDIIAILG 309


>gi|5758867|gb|AAD50841.1| ATP synthase beta subunit [Costus malortieanus]
 gi|5758887|gb|AAD50861.1| ATP synthase beta subunit [Heliconia latispatha]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085120|gb|AAX62966.1| ATP synthase beta subunit [Ctenolophon englerianus]
          Length = 482

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D    +   +  I    P  +        F+TGI+V+D+  P 
Sbjct: 89  GATLGRIFNVLGEPVD-DLGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 148 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 207

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 208 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 267

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 268 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 325

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 326 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 385

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 386 LQDIIAILG 394


>gi|291561744|emb|CBL40543.1| Archaeal/vacuolar-type H+-ATPase subunit B [butyrate-producing
           bacterium SS3/4]
          Length = 465

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 146/280 (52%), Gaps = 16/280 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
             I  SA   GR  + LG PIDG   LG    D  +++  K    + R+      +TGI 
Sbjct: 77  MEIGVSADMLGRTFDGLGNPIDG---LGPILADKKLDVNGKPLNPVAREYPRNYIRTGIS 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGREVR 203
            ID    L  GQ++ +F+G+G+    L        S+   SD    V+ + +G +  +V 
Sbjct: 134 AIDGLMTLIRGQKLPIFSGNGLPHDQLAAQIVMQSSLGDNSDEKFAVVFAAMGVK-YDVA 192

Query: 204 EFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSIT 260
           E+ E    ++  L    + +  +++  + R + P  A+T+AEY +  KG ++L+IL  +T
Sbjct: 193 EYFERTFRESGVLDHVAMFINLANDPVVERLITPKVALTVAEYLAFEKGMHILVILTDMT 252

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
            +A ++RE++++ GE+P  +GYP  ++S+L  L ER G      G++T +  + +  D+ 
Sbjct: 253 SYAEALREVSSSKGEIPSRKGYPGYLYSDLASLYERAGIVAGVNGSVTQIPILTMPNDDI 312

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             PI D    I +G IVL+RSL  +  YPP+  L S+SRL
Sbjct: 313 THPIPDLTGYITEGQIVLDRSLNGQSIYPPISVLPSLSRL 352


>gi|241912827|gb|ACS72092.1| AtpB [Aa paleacea]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|158602277|gb|ABW74605.1| ATP synthase beta subunit [Krapfia ranunculina]
          Length = 486

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|123325719|gb|ABM74484.1| ATP synthase beta subunit [Toddalia asiatica]
          Length = 466

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NFGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|7708548|emb|CAB89970.1| ATP synthase beta subunit [Pleea tenuifolia]
          Length = 488

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|75755666|ref|YP_319772.1| ATP synthase CF1 beta subunit [Acorus calamus]
 gi|161622317|ref|YP_001586189.1| ATP synthase CF1 beta subunit [Acorus americanus]
 gi|118573502|sp|Q3V527|ATPB_ACOCL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|69214414|gb|AAZ03787.1| ATP synthase beta chain [Acorus americanus]
 gi|74381716|emb|CAI53801.1| ATPase beta subunit [Acorus calamus]
 gi|160369860|gb|ABX38751.1| ATP synthase CF1 beta subunit [Acorus americanus]
          Length = 498

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEEKIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|257852972|gb|ACV71497.1| ATP synthase beta subunit [Cassipourea lanceolata]
          Length = 490

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D        +  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVD-DLGPVNSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|241912829|gb|ACS72093.1| AtpB [Aa calceata]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|160935952|ref|ZP_02083326.1| hypothetical protein CLOBOL_00847 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441194|gb|EDP18911.1| hypothetical protein CLOBOL_00847 [Clostridium bolteae ATCC
           BAA-613]
          Length = 463

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 145/281 (51%), Gaps = 18/281 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
             I  S    GR  N +G+PIDG   LG    D+ ++I  K    + R+      +TGI 
Sbjct: 77  MEIEVSEEMLGRTFNGIGQPIDG---LGDIISDIKLDINGKPLNPVTREYPRNYIRTGIS 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF----DKVIISLVGERGREVREFI 206
            ID  T L  GQ++ +F+G+G+    L +   +        D+    + G  G  V+  +
Sbjct: 134 AIDGLTTLIRGQKLPIFSGNGLPHDQLAAQIVQQASLGENSDEEFAIVFGAMG--VKYDV 191

Query: 207 EDYLGDNLKKS------VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSI 259
            D+     ++S       + +  +++  + R + P  A+T+AEY +  KG ++L+IL  +
Sbjct: 192 ADFFRRTFEESGVSEHVAMFINLANDPVVERLITPKIALTLAEYLAFEKGMHILVILTDM 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           T +A ++RE++++ GE+P  +G+P  ++S+L  L ER G      G++T +  + +  D+
Sbjct: 252 TSYAEAMREVSSSKGEIPSRKGFPGYLYSDLASLYERAGIVAGRPGSVTQIPILTMPNDD 311

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              PI D    I +G IVL+R L  +  YPP++ L S+SRL
Sbjct: 312 ITHPIPDLTGYITEGQIVLDRQLNGQNIYPPINVLPSLSRL 352


>gi|113910942|gb|ABI48203.1| ATPase beta subunit [Polypodium polycarpon]
          Length = 449

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V+D+  P  
Sbjct: 69  LGRIFNVLGEPVD---NLGPVQGSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 126 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 185

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +DSI RF  +  
Sbjct: 186 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDSIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLIDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 304 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 362

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 363 LQDIIAI----PGLD 373


>gi|21633411|gb|AAM52180.1| ATP synthase beta subunit [Jacquemontia tamnifolia]
          Length = 490

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTKITSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 218 GVINEEKIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 275

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 276 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 333

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   +
Sbjct: 334 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTL 393

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 394 QRYKELQDIIAILG 407


>gi|7708193|emb|CAB90042.1| ATP synthase beta subunit [Ceratophyllum demersum]
          Length = 463

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 70  ATLGRIFNVLGEPVD---NLGPVDTRTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 126

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G+  RE  + Y+       
Sbjct: 127 YRRGGKIGLFRGAGVGKTVLIMELINNIAKAHGGVSVFGGVGQRTREGNDLYMEMKESGV 186

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 187 INEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 246

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 247 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 304

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 305 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 364

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 365 ELQDIIAILG 374


>gi|6467950|gb|AAF13249.1|AF197616_1 ATPase beta subunit [Acorus gramineus]
          Length = 491

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 216

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 217 GVINEEKIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 276

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 334

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 335 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 394

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 395 YKELQDIIAILG 406


>gi|6686965|emb|CAB64777.1| ATP synthase beta subunit [Berzelia lanuginosa]
          Length = 403

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 20/305 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRD 388
           +E +D
Sbjct: 399 KELQD 403


>gi|46360685|gb|AAS89124.1| ATP synthase beta subunit [Jubula hutchinsiae subsp. javanica]
          Length = 382

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 158/306 (51%), Gaps = 22/306 (7%)

Query: 105 VINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D S  + + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 5   IFNVLGEPVD---NLGPVDASTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 61

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 62  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQN 121

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 122 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 181

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 182 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 239

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E +D
Sbjct: 240 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKELQD 298

Query: 389 IRLIGG 394
           I  I G
Sbjct: 299 IIAILG 304


>gi|5758905|gb|AAD50879.1| ATP synthase beta subunit [Pentastemona egregia]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+TIAEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|312285185|gb|ADQ64334.1| ATP synthase beta subunit [Anisocycla linearis]
          Length = 461

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGTPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 204

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 205 IVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 265 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +DI
Sbjct: 323 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDI 382

Query: 390 RLIGG 394
             I G
Sbjct: 383 IAILG 387


>gi|195183471|dbj|BAG66951.1| ATP synthase beta subunit [Allexis obanensis]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 210

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 211 SGVINEANIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 270

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 271 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 328

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 329 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|194267333|gb|ACF35653.1| ATP synthase beta subunit [Floydia praealta]
          Length = 487

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|119368004|dbj|BAF40492.1| ATP synthase beta subunit [Stigmaphyllon diversifolium]
          Length = 486

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI V+D+  
Sbjct: 93  GSTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGINVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|5758898|gb|AAD50872.1| ATP synthase beta subunit [Monocostus uniflorus]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPLDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|312285255|gb|ADQ64369.1| ATP synthase beta subunit [Pycnarrhena novoguineensis]
          Length = 468

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 204

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 205 IVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 265 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +DI
Sbjct: 323 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDI 382

Query: 390 RLIGG 394
             I G
Sbjct: 383 IAILG 387


>gi|159232274|emb|CAJ80652.1| ATP synthase beta subunit [Lycium barbarum]
 gi|159232276|emb|CAJ80653.1| ATP synthase beta subunit [Lycium australe]
          Length = 336

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 155/302 (51%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|99640411|emb|CAJ45072.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           foersteri]
          Length = 493

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|7708620|emb|CAB89983.1| ATP synthase beta subunit [Ribes speciosum]
          Length = 492

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PHRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|7708672|emb|CAB90094.1| ATP synthase beta subunit [Tecophilaea cyanocrocus]
          Length = 493

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|149384663|gb|ABR25140.1| ATP synthase beta chain [Odontosoria aculeata]
          Length = 426

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 153/307 (49%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P   G
Sbjct: 39  LGRIFNVLGEPVDNLGPVESGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRG 97

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 98  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEK 157

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 158 NISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 217

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT+  +V V  D+  DP   +  
Sbjct: 218 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSTQAVYVPADDLTDPAPATTF 275

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 276 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 334

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 335 DIIAILG 341


>gi|14718062|gb|AAK72772.1| ATP synthase beta subunit [Gladiolus buckerveldii]
          Length = 479

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|15705376|gb|AAL05616.1| AtpB [Daphnandra micrantha]
          Length = 487

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 215

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 216 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 275

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 276 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 333

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 334 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|3676294|gb|AAD03391.1| mitochondrial ATPase beta subunit [Nicotiana sylvestris]
          Length = 561

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 161/319 (50%), Gaps = 24/319 (7%)

Query: 96  SPSACWCGR-----VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           SP     GR     +IN +G+ ID    +   D  + I  + P  + +   ++   TGI+
Sbjct: 160 SPITVPVGRATLASIINVIGEAIDERGPITT-DHFLPIHREAPAFVEQATEQQIIVTGIK 218

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----V 202
           V+D+      G +IG+F G+G+GK+ L+    +  A++     V    VGER RE     
Sbjct: 219 VVDLLAAYQRGGKIGLFGGAGVGKTMLIMELINNVAKAHGGFSVFAG-VGERTREGNDLY 277

Query: 203 REFIED---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256
           RE IE     LG+   +S   +V    +E P  R    LT +T+AE+F  ++G  VLL +
Sbjct: 278 REMIESGVIKLGEKQSESKCALVYGQMNEPPGARACVGLTGLTVAEHFRDAEGQYVLLFI 337

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V ++ V 
Sbjct: 338 DNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVP 395

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  + LD   VL+R ++E G YP VDPL S SR L+      D       
Sbjct: 396 ADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARG 455

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +  ++  ++  +DI  I G
Sbjct: 456 VQKVLQNYKNLQDIIAILG 474


>gi|17367090|sp|Q9TMV0|ATPB_BEARE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5758856|gb|AAD50830.1| ATP synthase beta subunit [Beaucarnea recurvata]
          Length = 495

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|257852932|gb|ACV71477.1| ATP synthase beta subunit [Mammea siamensis]
          Length = 484

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D D        +  I    P  +        F+TGI+VID+  P 
Sbjct: 91  GATLGRIFNVLGEPVD-DLGPVHTRTTSPIHRSAPAFIQLDTKLSIFETGIKVIDLLAPY 149

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 209

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 210 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 269

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 270 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 327

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 328 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 387

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 388 LQDIIAILG 396


>gi|241912900|gb|ACS72128.1| AtpB [Pterichis acuminata]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDICTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|119350501|gb|ABL63201.1| AtpB [Gloeotila contorta]
          Length = 380

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 16/306 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   +  + I    P  ++       F+TGI+V+D+  P   G
Sbjct: 29  LGRIFNVLGEPVDNLGPVNTKE-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 87

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 88  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINES 147

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 148 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 207

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 208 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 265

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R+LA +G YP VDPL S S +       D   +   ++   + R++E +D
Sbjct: 266 AHLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDSHYQCAQNVKQTLQRYKELQD 325

Query: 389 IRLIGG 394
           I  I G
Sbjct: 326 IIAILG 331


>gi|118917330|dbj|BAF40449.1| ATP synthase beta subunit [Chondrostylis kunstleri]
          Length = 487

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N +G+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 95  ATLGRIFNVVGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 151

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 152 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 211

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 212 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 330 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 389

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 390 ELQDIIAILG 399


>gi|17224735|gb|AAL37089.1| ATP synthase beta subunit [Dioscorea brachybotrya]
          Length = 472

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 200 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|62085171|gb|AAX62990.1| ATP synthase beta subunit [Panda oleosa]
          Length = 482

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|257067170|ref|YP_003153426.1| V-type ATP synthase subunit B [Anaerococcus prevotii DSM 20548]
 gi|256799050|gb|ACV29705.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaerococcus prevotii DSM 20548]
          Length = 455

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 143/278 (51%), Gaps = 15/278 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GR  N LG+PID   ++    K D++   ++ V    +R    +  +TGI  ID 
Sbjct: 82  SEDMIGRAFNGLGEPIDDGPAIIPEEKRDVNGTAINPV----SRDYPSEFIQTGISTIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIED 208
              L  GQ++ +F+G+G+  + + +  AR       D    V+ + +G    E + F+ D
Sbjct: 138 LNTLVRGQKLPIFSGNGLPHNQVAAQIARQARVLSDDEGFAVVFAAIGITFEEAQFFMND 197

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
           +     L +SV+ +  +D+  I R   P  A+T AEY + + D  VL+I+  +T +A ++
Sbjct: 198 FRKTGALDRSVLFMNLADDPAIERLSTPKMALTAAEYLAFEKDMQVLVIMTDMTNYAEAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  + ER G    + G IT +  + +  D+   PI D
Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTIYERAGKLRGKPGTITQIPILSMPEDDITHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
               I +G I+LNR L  +G  PPV  L S+SRL DK 
Sbjct: 318 LTGYITEGQIILNRELYNQGIEPPVSILPSLSRLKDKG 355


>gi|253579395|ref|ZP_04856665.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849493|gb|EES77453.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 460

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 156/321 (48%), Gaps = 12/321 (3%)

Query: 51  HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINA 108
           H    +  +G++I I  D   I      + +SLG+      GR   I  S    GR  N 
Sbjct: 33  HMDDGTRKIGRIIEIYEDKAVIQVFEGTDGMSLGNTHTRLTGRPMEIGLSPEILGRTFNG 92

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+PIDG   +   D+ + I       + R+       TGI  ID  T L  GQ++ +F+
Sbjct: 93  IGQPIDGLGDITP-DVKLNINGLPLNPVAREYPRNYINTGISAIDGLTTLIRGQKLPIFS 151

Query: 169 GSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
           G+G+    L +   +       SD    ++ + +G +      F   +        VV+ 
Sbjct: 152 GNGLPHDKLAAQIVQQASLGEDSDEDFAIVFAAMGVKYDVAEFFRRTFEESGAADHVVMF 211

Query: 222 ATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
                 P++ R + P  A+T AEY +  KG ++L+IL  IT F  ++RE++++ GE+P  
Sbjct: 212 LNLANDPVVERLLTPKIALTAAEYLAFEKGMHILVILTDITSFCEAMREVSSSKGEIPSR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP  ++SEL  L ER G  + + G++T +  + +  D+   PI D    I +G IVL+
Sbjct: 272 KGYPGYLYSELATLYERAGIVKGKPGSVTQIPILTMPNDDITHPIPDLTGYITEGQIVLD 331

Query: 340 RSLAEEGRYPPVDPLASVSRL 360
           R L  +  YPP++ L S+SRL
Sbjct: 332 RQLHGQAIYPPINVLPSLSRL 352


>gi|241912864|gb|ACS72110.1| AtpB [Kreodanthus simplex]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINTIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|158602261|gb|ABW74597.1| ATP synthase beta subunit [Actaea simplex]
          Length = 476

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDTRTTXXIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 317 RATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|156622725|dbj|BAF76343.1| ATP synthase beta subunit [Chloranthus spicatus]
          Length = 487

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|21633455|gb|AAM52202.1| ATP synthase beta subunit [Cuscuta europaea]
          Length = 448

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 60  GSTLGRIFNVLGHPVDNLGPVNTNKKS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPY 118

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 119 RCGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVI 178

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    G +VLL +D+I RF  + 
Sbjct: 179 NDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQAG 238

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 239 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 297 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIIGEEHYETAQRVKQTLQRYKE 356

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 357 LQDIIAILG 365


>gi|14718111|gb|AAK72795.1| ATP synthase beta subunit [Lilium superbum]
          Length = 491

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 334 PAATFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|7578493|gb|AAF64069.1|AF132887_1 ATP synthase, B subunit [Retanilla trinervia]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|99640426|emb|CAJ45075.1| putative beta subunit of chloroplast ATP synthase [Calochlaena
           villosa]
          Length = 493

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 400 QDIIAILG 407


>gi|17224761|gb|AAL37102.1| ATP synthase beta subunit [Tacca plantaginea]
          Length = 481

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  VTLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|21633381|gb|AAM52165.1| ATP synthase beta subunit [Wilsonia humilis]
          Length = 490

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTKTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 216

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 217 SGVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 276

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 334

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 335 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 394

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 395 RYKELQDIIAILG 407


>gi|46360724|gb|AAS89143.1| ATP synthase beta subunit [Targionia hypophylla]
          Length = 382

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 159/307 (51%), Gaps = 22/307 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 4   RIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRRG 60

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 61  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQ 120

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 121 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 180

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 181 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 238

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 297

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 298 DIIAILG 304


>gi|5758882|gb|AAD50856.1| ATP synthase beta subunit [Glomeropitcairnia penduliflora]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|5758873|gb|AAD50847.1| ATP synthase beta subunit [Cymbocarpa refracta]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62085165|gb|AAX62987.1| ATP synthase beta subunit [Neoscortechinia kingii]
          Length = 482

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +         
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 205

Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
              E+ + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 206 VINEEKIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 263

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 264 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 321

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 322 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQ 381

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 382 RYKELQDIIAILG 394


>gi|116073688|ref|ZP_01470950.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. RS9916]
 gi|116068993|gb|EAU74745.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. RS9916]
          Length = 506

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 180/387 (46%), Gaps = 16/387 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L Q  EDY K++ V     S++ +V      +++   L   +  +    ++  + I +NL
Sbjct: 13  LKQQIEDYDKSVSV-----SNVGTVLQVGDGIARVYGLQQAMAGELLEFEDGTEGIALNL 67

Query: 68  --DIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDL 124
             D V    +G G  I  G  V   G+    P      GRV+N LG+PIDG   +   + 
Sbjct: 68  EDDNVGAVLMGEGNGIQEGSTVRATGKIAAVPVGDAMLGRVVNPLGQPIDGKGEIATTET 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
            + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++  
Sbjct: 128 RL-IESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTILN 186

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVT 240
           ++D     +   VG++   V +  E  L +   L  SVVV A + ES  L+ +AP T  +
Sbjct: 187 QADQDVVCVYVAVGQKAASVAQVTE-VLRERGALAYSVVVAANASESAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEE 385
           R+   A +   KK+  +L   + +F+E
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|17224755|gb|AAL37099.1| ATP synthase beta subunit [Tacca leontopetaloides]
          Length = 484

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  VTLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 211 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|75336583|sp|Q9MTY2|ATPB_SARHE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688037|emb|CAB89723.1| ATP synthase beta subunit [Saruma henryi]
 gi|33327769|gb|AAQ09248.1| ATP synthase beta subunit [Saruma henryi]
          Length = 498

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7706837|emb|CAB89903.1| ATP synthase beta subunit [Alvaradoa amorphoides]
          Length = 476

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAQGIYPAVDPLDSTSTMLQPRIVGXEXYETAQRVKQTLXRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|5758877|gb|AAD50851.1| ATP synthase beta subunit [Dimerocostus strobilaceus]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPLDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|69214424|gb|AAZ03792.1| ATP synthase beta chain [Yucca schidigera]
          Length = 495

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|62902825|gb|AAY19327.1| ATP synthase beta subunit [Parnassia palustris]
          Length = 470

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V   +  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPAXDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|241912918|gb|ACS72137.1| AtpB [Stenorrhynchos millei]
 gi|241912922|gb|ACS72139.1| AtpB [Stenorrhynchos vaginatum]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|158602291|gb|ABW74612.1| ATP synthase beta subunit [Ranunculus trichophyllus]
          Length = 477

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|158602285|gb|ABW74609.1| ATP synthase beta subunit [Ficaria verna]
          Length = 486

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|65332610|gb|AAY42229.1| ATP synthase beta subunit [Anisophyllea polyneura]
          Length = 479

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  B   +  I    P  +        F+TGI+V+B+  
Sbjct: 86  GATLGRIFNVLGEPID---NLGPVBTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVBLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|5758853|gb|AAD50827.1| ATP synthase beta subunit [Aechmea chantinii]
          Length = 496

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830568|gb|ACN66379.1| ATP synthase beta chain [Pycnarrhena celebica]
          Length = 489

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 174/367 (47%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 44  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS----- 217
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S     
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVINE 218

Query: 218 --------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
                    +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E
Sbjct: 219 QNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 278

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 279 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 336

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +
Sbjct: 337 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQ 396

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 397 DIIAILG 403


>gi|159227280|emb|CAJ80431.1| ATP synthase beta subunit [Solanum microdontum]
          Length = 336

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 153/308 (49%), Gaps = 20/308 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+
Sbjct: 33  IRVPVGGATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIK 89

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 90  VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 149

Query: 211 ---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 150 EMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 209

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D
Sbjct: 210 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPAD 267

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 268 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 327

Query: 378 HLIHRFEE 385
             + R++E
Sbjct: 328 QTLQRYKE 335


>gi|113910790|gb|ABI48127.1| ATPase beta subunit [Leiomylia anomala]
          Length = 456

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGEPVD---NLGPVDANTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 INEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHSDATTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|17224719|gb|AAL37081.1| ATP synthase beta subunit [Dioscorea elephantipes]
          Length = 479

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|7688337|emb|CAB89746.1| ATP synthase beta subunit [Trema micrantha]
          Length = 443

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 61  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 117

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 118 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 177

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 178 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 237

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 238 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPA 295

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 296 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVXEEHYETAQRVKQTLQRY 355

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 356 KELQDIIAILG 366


>gi|312285229|gb|ADQ64356.1| ATP synthase beta subunit [Hypserpa decumbens]
 gi|312285231|gb|ADQ64357.1| ATP synthase beta subunit [Hypserpa nitida]
          Length = 469

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|190352242|gb|ACE76517.1| ATP synthase beta subunit [Palmophyllum umbracola]
 gi|192758114|gb|ACF04984.1| ATP synthase beta subunit [Palmophyllum umbracola]
          Length = 299

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 150/290 (51%), Gaps = 22/290 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+PID    LG  D S  + I    P  +        F+TG
Sbjct: 15  GPLNVPVGETTLGRIFNVLGEPID---ELGPVDTSKTLPIHRAAPKFIQLDTKLSIFETG 71

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE   
Sbjct: 72  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 130

Query: 202 -VREFIEDYLGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             +E  E  + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 131 LYQEMKESKVIDEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLF 190

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 191 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYV 248

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
             D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +  + W
Sbjct: 249 PADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPW 297


>gi|110915642|gb|ABH02609.1| ATP synthase beta subunit [Gastridium ventricosum]
          Length = 490

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +         +TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIXETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|150251476|ref|YP_001312209.1| ATP synthase CF1 beta chain [Cycas taitungensis]
 gi|190358665|sp|A6H5I4|ATPB_CYCTA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|149941526|dbj|BAF64950.1| ATP synthase CF1 beta chain [Cycas taitungensis]
 gi|156597989|gb|ABU85261.1| ATP synthase CF1 beta subunit [Cycas micronesica]
          Length = 492

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVIGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 217

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 395 RYKELQDIIAILG 407


>gi|14718074|gb|AAK72778.1| ATP synthase beta subunit [Hippeastrum papilio]
          Length = 497

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|17224757|gb|AAL37100.1| ATP synthase beta subunit [Tacca artocarpifolia]
          Length = 483

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  VTLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|14718252|gb|AAK72864.1| ATP synthase beta subunit [Retanilla trinervia]
          Length = 491

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|68139365|gb|AAY86047.1| ATP synthase beta subunit [Hernandia ovigera]
          Length = 458

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 196 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPTIVGEEHYETAQRVKQTSQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|186684957|ref|YP_001868153.1| F0F1 ATP synthase subunit alpha [Nostoc punctiforme PCC 73102]
 gi|226739918|sp|B2J058|ATPA_NOSP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|186467409|gb|ACC83210.1| ATP synthase F1, alpha subunit [Nostoc punctiforme PCC 73102]
          Length = 506

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 26/350 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G EI  G  V   GR  +I       GR
Sbjct: 60  GTIGIAQNLEEDNVGAVL-----------MGEGLEIQEGSSVTATGRIAQIPVGEALIGR 108

Query: 105 VINALGKPIDGDDSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           V++ALG+PIDG     KGD+    S  I S  P  + R+ V +  +TGI  ID   P+  
Sbjct: 109 VVDALGRPIDG-----KGDIKSSESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGR 163

Query: 161 GQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKS 217
           GQR  +      GK+ + +         D + + + +G++   V   ++       +  +
Sbjct: 164 GQRELIIGDRQTGKTAIAIDTIINQKEEDVICVYVAIGQKASTVANVVQTLQEKGAMDYT 223

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VV A++ E   L+ +AP T  TIAEYF  KG   L+I D +++ A + R+++      P
Sbjct: 224 IVVAASASEPATLQYLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPP 283

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG 
Sbjct: 284 GREAYPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQ 343

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           I L+  L   G  P V+P  SVSR+   A +   KK+   +   + +F++
Sbjct: 344 IFLSSDLFNAGIRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFDD 393


>gi|323715432|gb|ADY04784.1| ATP synthase beta subunit [Mastixia euonymoides]
          Length = 474

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|241912874|gb|ACS72115.1| AtpB [Myrosmodes paludosa]
          Length = 489

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|254520098|ref|ZP_05132154.1| V-type sodium ATP synthase subunit B [Clostridium sp. 7_2_43FAA]
 gi|226913847|gb|EEH99048.1| V-type sodium ATP synthase subunit B [Clostridium sp. 7_2_43FAA]
          Length = 460

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 149/285 (52%), Gaps = 15/285 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GR+ + +G PID   ++    + D++ E ++ V    +R    +  +TGI  ID 
Sbjct: 82  SEDMLGRIFDGMGHPIDNGPNIIPEKRLDINGEAINPV----SRDYPSEFIQTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIED 208
              L  GQ++ VF+ SG+  + L +  AR      SD    V+ + +G    E + F+++
Sbjct: 138 LNTLVRGQKLPVFSASGLPHAQLAAQIARQARVLNSDANFAVVFAAIGITFEESQFFVDE 197

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +     +  SV+ +  + +  I R   P  A+T AE+ +  KG +VL+I+  IT +A ++
Sbjct: 198 FNKTGAIDNSVLFMNLASDPAIERIATPRMALTTAEFLAYEKGMHVLVIMTDITNYAEAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  L ER G      G+IT +  + +  ++   PI D
Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTLYERAGRLRGRDGSITQIPILTMPEEDKTHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
               I +G I+L+R L ++G  PP+D L S+SRL DK    ++ +
Sbjct: 318 LTGYITEGQIILSRELYKKGIIPPIDVLPSLSRLKDKGIGKNKTR 362


>gi|114644228|ref|XP_001168671.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           beta subunit isoform 1 [Pan troglodytes]
          Length = 518

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 28/306 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N +G+PID    +     +  I ++ P  M     ++   TGI+V+D+  P   G
Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210
            +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E IE     L
Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269
            D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D           +
Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFID-----------V 307

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  
Sbjct: 308 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 365

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388
           + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  ++  ++  +D
Sbjct: 366 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 425

Query: 389 IRLIGG 394
           I  I G
Sbjct: 426 IIAILG 431


>gi|8452730|emb|CAB89965.1| ATP synthase beta subunit [Pterostemon rotundifolius]
          Length = 490

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L E I  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQEXI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|8452704|emb|CAB90097.2| ATP synthase beta subunit [Nomocharis pardanthina]
          Length = 479

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 328 PAATFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|27435860|gb|AAO13253.1| ATP synthase beta subunit [Ascarina lucida]
          Length = 491

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|192910868|gb|ACF06542.1| ATP synthase beta subunit [Elaeis guineensis]
          Length = 498

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|52082891|gb|AAU26026.1| ATPase beta subunit [Cinnamosma madagascariensis]
          Length = 477

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|7687970|emb|CAB89705.1| ATP synthase beta subunit [Cinnamodendron ekmanii]
          Length = 498

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|4206512|gb|AAD11687.1| ribulose 1,5-bisphosphate carboxylase [Chloroxylon swietenia]
 gi|4206570|gb|AAD11716.1| ATP synthase beta subunit [Chloroxylon swietenia]
          Length = 464

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPVD---NFGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 200 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|158602249|gb|ABW74591.1| ATP synthase beta subunit [Anemone canadensis]
          Length = 474

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 197 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|84385787|ref|ZP_00988817.1| ATP synthase subunit A [Vibrio splendidus 12B01]
 gi|84379103|gb|EAP95956.1| ATP synthase subunit A [Vibrio splendidus 12B01]
          Length = 513

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 32/348 (9%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           + +NLD   +  V +G   ++S G  V   GR    P      GRV+N LG+PIDG    
Sbjct: 62  LALNLDTHSVGAVVMGPYTDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPIDG---- 117

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG +S + +  V    P  + R+ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 118 -KGPVSCDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQTGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPIL 230
            L   ++  + D   K +   +G++   +   +   EDY  D LK ++VVVA++ ES  L
Sbjct: 177 ALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEDY--DALKNTIVVVASASESAAL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF   
Sbjct: 235 QYLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLH 294

Query: 291 PRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            RLLER              G  + + G++TA+  +     + +  +  +V SI DG + 
Sbjct: 295 SRLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVF 354

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   L   G  P VDP  SVSR+   A     KKL   +   + ++ E
Sbjct: 355 LQTQLFNSGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQYRE 402


>gi|241912892|gb|ACS72124.1| AtpB [Prescottia oligantha]
          Length = 489

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|155029311|dbj|BAF75539.1| ATP synthase beta subunit [Paranecepsia alchorneifolia]
          Length = 486

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKES 208

Query: 218 VVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 209 GVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 268

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 269 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 326

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 327 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQR 386

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 387 YKELQDIIAILG 398


>gi|65332608|gb|AAY42228.1| ATP synthase beta subunit [Anisophyllea obtusifolia]
          Length = 473

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +++G  V   G    +       GR
Sbjct: 26  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTIGMEVIDTGAPLSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 86  IFNVLGEPXD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGG 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 143 KVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 202

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 203 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  +
Sbjct: 263 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 320

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 321 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKZTLQRYKELQDI 380

Query: 390 RLIGG 394
             I G
Sbjct: 381 IAILG 385


>gi|5758892|gb|AAD50866.1| ATP synthase beta subunit [Hippeastrum sp. Hahn 6875]
          Length = 496

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|5001595|gb|AAD37044.1|AF092118_1 ATP synthase beta subunit [Daphniphyllum sp. SH1999]
          Length = 480

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 86  GATLGRIFNVLGEPVDNLGPVXXXTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 204

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 205 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 265 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 323 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 382

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 383 LQDIIAILG 391


>gi|290490160|gb|ADD31487.1| ATP synthase CF1 beta subunit protein [Phoradendron serotinum]
          Length = 497

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 153/308 (49%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     S  I    P  +        F+TGI+VID+  P  
Sbjct: 103 ATLGRIFNVLGEPVDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVIDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 222 EKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E    S  +   + R++E 
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETSQRVKQTLQRYKEL 399

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 400 QDIIAILG 407


>gi|241912906|gb|ACS72131.1| AtpB [Sarcoglottis grandiflora]
          Length = 489

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|89242536|gb|ABD64626.1| ATPase beta subunit [Ranunculus sp. Qiu 95024]
          Length = 436

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|33327767|gb|AAQ09247.1| ATP synthase beta subunit [Ribes aureum]
          Length = 494

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PHRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|17224709|gb|AAL37076.1| ATP synthase beta subunit [Dioscorea glabra]
          Length = 480

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|7708442|emb|CAB90105.1| ATP synthase beta subunit [Fouquieria columnaris]
          Length = 477

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               G++ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGQIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|17224753|gb|AAL37098.1| ATP synthase beta subunit [Tacca palmata]
          Length = 489

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 102 VTLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKFSIFETGIKVVDLLAP 158

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 218

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 219 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 278

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 279 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 336

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 337 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 396

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 397 ELQDIIAILG 406


>gi|14717931|gb|AAK72708.1| ATP synthase beta subunit [Allium altaicum]
          Length = 481

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|5758886|gb|AAD50860.1| ATP synthase beta subunit [Heliconia irrasa]
          Length = 496

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|34499994|gb|AAQ73579.1| ATP synthase beta subunit [Gallibacterium anatis]
          Length = 444

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 8/298 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PID    +G+      I    P    +    +  +TGI+VID+  P   G
Sbjct: 82  LGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKG 140

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217
            ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K 
Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
            +V    +E P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P
Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+    ERI  +  + G+IT+V +V V  D+  DP   +    LD  +V
Sbjct: 261 SAVGYQPTLAEEMGGFQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFVHLDSTVV 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394
           L+R +A  G Y     L S SR  D      E   V+  +  ++ R++E +DI  I G
Sbjct: 319 LSRQIASLGIYLRWIRLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376


>gi|212896622|gb|ACJ38514.1| membrane-bound ATP synthase subunit B [Lablab purpureus]
          Length = 470

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 87  GATLGRIFNVLGEPIDNLGPVNTRTTS-PIHRSAPTFIQLDTKLSIFETGIKVVDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 146 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 205

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 206 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 324 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|4995854|emb|CAB44289.1| H(+)-transporting ATP synthase [Thymelaea hirsuta]
          Length = 487

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TG +V+D+  P
Sbjct: 95  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHXSAPAFIQLDTXLSIFETGXKVVDLLAP 151

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 152 YRRGGKIGLFGGAGVGKTVLIMELINXIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 210

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLXERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|5758919|gb|AAD50893.1| ATP synthase beta subunit [Typha latifolia]
          Length = 496

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R+
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|12004147|gb|AAG43913.1|AF213782_1 ATP synthase beta subunit [Manilkara zapota]
          Length = 482

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAKEVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|17224711|gb|AAL37077.1| ATP synthase beta subunit [Dioscorea japonica]
          Length = 481

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|212896658|gb|ACJ38532.1| membrane-bound ATP synthase subunit B [Apios americana]
          Length = 470

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 204 VINXQNIAESKVALVYGQMNEPPGARMXVGLTALPMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|224830598|gb|ACN66394.1| ATP synthase beta chain [Triclisia sp. SBH-2009]
          Length = 456

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 101 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 157

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 216

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 217 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 276

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 277 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 334

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +D
Sbjct: 335 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGXEHYETAQRVKQTLQRYKELQD 394

Query: 389 IRLIGG 394
           I  I G
Sbjct: 395 IIAILG 400


>gi|56675812|emb|CAC60248.2| ATP synthase beta subunit [Carpodetus serratus]
          Length = 489

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 172/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G  V   G     P      GR
Sbjct: 42  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAALSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 217

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 218 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 277

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 336 AHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPEIVGNEHYETAQRVKQTLQRYKELQD 395

Query: 389 IRLIGG 394
           I  I G
Sbjct: 396 IIAILG 401


>gi|24940264|emb|CAD43398.1| ATP synthase beta subunit [Echiochilon pauciflorum]
          Length = 482

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFXQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L      +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLXMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|62184014|gb|AAX73318.1| ATP synthase beta subunit [Banksia serrata]
 gi|62184016|gb|AAX73319.1| ATP synthase beta subunit [Banksia aemula]
          Length = 497

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       ++  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEQHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912836|gb|ACS72096.1| AtpB [Brachystele polyantha]
          Length = 489

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIKLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|224830482|gb|ACN66336.1| ATP synthase beta chain [Albertisia papuana]
 gi|224830524|gb|ACN66357.1| ATP synthase beta chain [Curarea toxicofera]
          Length = 488

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 43  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 102

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 103 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 159

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 160 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 218

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 219 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 278

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 279 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 336

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +D
Sbjct: 337 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQD 396

Query: 389 IRLIGG 394
           I  I G
Sbjct: 397 IIAILG 402


>gi|158602289|gb|ABW74611.1| ATP synthase beta subunit [Ranunculus lyallii]
          Length = 483

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|110915624|gb|ABH02600.1| ATP synthase beta subunit [Diarrhena obovata]
          Length = 490

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G    E  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTXEGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  +  +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTXSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390

Query: 384 EETRDIRLIGG 394
           +E  DI  I G
Sbjct: 391 KELXDIXAILG 401


>gi|156622733|dbj|BAF76347.1| ATP synthase beta subunit [Chimonanthus praecox]
          Length = 487

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 210

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 211 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 270

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 271 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 328

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     
Sbjct: 329 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|149390361|ref|YP_001294359.1| ATP synthase CF1 beta subunit [Dioscorea elephantipes]
 gi|190358667|sp|A6MML4|ATPB_DIOEL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148668053|gb|ABR01437.1| ATP synthase CF1 beta subunit [Dioscorea elephantipes]
          Length = 496

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|4995055|emb|CAB43987.1| H(+)-transporting ATP synthase [Bombax ceiba]
          Length = 469

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  P
Sbjct: 80  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 137 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 196

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 197 INEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP  
Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXEGSITSIQAVYVPADDLTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLXSTSTMLQPRIVGEEHXETAQRVKQTXXRYK 374

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 375 ELQDIIAILG 384


>gi|89242532|gb|ABD64624.1| ATPase beta subunit [Hernandia ovigera]
          Length = 436

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPTIVGEEHYETAQRVKQTSQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|7688431|emb|CAB89731.1| ATP synthase beta subunit [Xeronema callistemon]
          Length = 486

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 44  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 220

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 221 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 280

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 281 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 338

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 339 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 398

Query: 390 RLIGG 394
             I G
Sbjct: 399 IAILG 403


>gi|3850982|gb|AAC72183.1| ATP synthase beta subunit [Stenocarpus salignus]
          Length = 490

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLXMEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|210613817|ref|ZP_03289931.1| hypothetical protein CLONEX_02144 [Clostridium nexile DSM 1787]
 gi|210151026|gb|EEA82034.1| hypothetical protein CLONEX_02144 [Clostridium nexile DSM 1787]
          Length = 461

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 29/364 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +FVV+   N   LG++I I  D   I      E +SL +    L  H     +SP     
Sbjct: 31  EFVVN--GNERKLGRIIEIYEDKAVIQVFEGTENMSLLNTHTKLTGHPMEIALSPD--ML 86

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N +G+PID    LG     L+ +I       + R+      +TGI  ID  T L  
Sbjct: 87  GRTFNGIGQPID---DLGPITSTLTRDINGLPLNPVKREYPRNYIRTGISAIDGLTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+G+G+    L +   +       SD    ++ + +G +  +V EF +    ++
Sbjct: 144 GQKLPIFSGNGLPHDQLAAQIVKQASLGDDSDEEFAIVFAAMGVK-HDVAEFFQRTFEES 202

Query: 214 -LKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
            +   VV+       P++ ++  P  A+T+AEY +  +  ++L+IL  +T FA ++RE++
Sbjct: 203 GVSDHVVMFLNLANDPVVERLITPKVALTVAEYLAFEQNKHILVILTDMTSFAEAMREVS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
           ++ GE+P  +G+P  ++SEL  + ER G      G++T +  + +  D+   PI D    
Sbjct: 263 SSKGEIPSRKGFPGYLYSELATIYERAGIVAGVNGSVTQLPILTMPNDDITHPIPDLTGY 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385
           I +G IVL+R+L  +  YPP++ L S+SRL      +    AD + L + L     +  E
Sbjct: 323 ITEGQIVLDRALHGQSIYPPINILPSLSRLMKDGIGEGYTRADHQDLANQLFSSYAKVGE 382

Query: 386 TRDI 389
            R++
Sbjct: 383 ARNL 386


>gi|4995715|emb|CAB44231.1| H(+)-transporting ATP synthase [Matisia cordata]
          Length = 482

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 89  GATLGRIFNVLGEPVDNLRPVDTRTTS-PIHKPAPAFIQLDTKLSIFETGIKVVDLLAPY 147

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 148 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 207

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 208 NEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 267

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 268 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 325

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 326 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 385

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 386 LQDIIAILG 394


>gi|17224723|gb|AAL37083.1| ATP synthase beta subunit [Dioscorea hispida]
          Length = 480

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|241912834|gb|ACS72095.1| AtpB [Baskervilla colombiana]
          Length = 489

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVIGEPVD---NLGPVDICTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|158602297|gb|ABW74615.1| ATP synthase beta subunit [Trautvetteria caroliniensis]
          Length = 490

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|21633315|gb|AAM52132.1| ATP synthase beta subunit [Operculina sp. Romero 1701]
          Length = 490

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D +    I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G    E  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTXEGNDLYLEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|29726124|gb|AAD00589.2| ATP synthase beta subunit [Sanguinaria canadensis]
          Length = 491

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +     R+
Sbjct: 332 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +D+  I G
Sbjct: 392 KELQDMIAILG 402


>gi|29539350|dbj|BAC67676.1| vacuolar ATP synthase subunit B [Cyanidioschyzon merolae]
          Length = 492

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 20/324 (6%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +N D  +V +     G +     + F     R+  S    GRV +  G+PIDG  
Sbjct: 57  GQVLEVNGDRAVVQVFEGTYGIDSGGTVIEFTGDVLRMPLSRDMLGRVFDGSGRPIDGGP 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +     L+    S + P   R   ++ F+TGI  ID+   +  GQ+I +F  SG+    +
Sbjct: 117 AFLPEKLADINGSPINP-QRRMYPQEMFQTGISTIDVMMSVARGQKIPIFTSSGLPSDVV 175

Query: 178 LSMFARSDCFDK---------------VIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
            +   R  C  +               ++ + +G      R F  D+  +  + ++V+ +
Sbjct: 176 AAQICRQACLVRPPGTKKNDANDDQFAIVFAAMGATQETARFFRRDFEENGAMTRTVLFL 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVAR 280
             S +  I R + P  A+T AEY +   G +VL+IL  +  +  ++RE++    E+P  R
Sbjct: 236 NMSSDPTIERIITPRLALTTAEYLAYDCGLHVLVILTDMASYCDALREVSAAREEVPGRR 295

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP+ ++S+L  L ER G  E  KG+IT +  V +   +   PI D    I +G I L+ 
Sbjct: 296 GYPSFMYSDLSSLYERAGRVEGCKGSITQIPIVTMPNGDITHPIPDLTGYITEGQIFLDA 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKA 364
           +L     YPPV+PL S+SRL   A
Sbjct: 356 ALHSREIYPPVNPLPSLSRLMKSA 379


>gi|241912842|gb|ACS72099.1| AtpB [Cranichis engelii]
          Length = 489

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDICTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|12004145|gb|AAG43912.1|AF213781_1 ATP synthase beta subunit [Maesa tenera]
          Length = 487

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|78103257|ref|YP_358583.1| ATP synthase CF1 beta subunit [Phalaenopsis aphrodite subsp.
           formosana]
 gi|118573716|sp|Q3BAN5|ATPB_PHAAO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|58802787|gb|AAW82507.1| ATP synthase CF1 beta chain [Phalaenopsis aphrodite subsp.
           formosana]
          Length = 498

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|315652915|ref|ZP_07905882.1| V-type ATP synthase, subunit B [Eubacterium saburreum DSM 3986]
 gi|315484823|gb|EFU75238.1| V-type ATP synthase, subunit B [Eubacterium saburreum DSM 3986]
          Length = 475

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 148/282 (52%), Gaps = 18/282 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
             I  S    GR  N +G+PIDG   LG  + + ++++  K    + R+      +TGI 
Sbjct: 77  MEIGVSEAMFGRTFNGIGEPIDG---LGHVEAEKTLDVNGKPLNPVTREYPRNYIRTGIS 133

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDK---VIISLVGERGRE 201
            ID    L  GQ++ +F+G+G+    L +   R      SD  D+   V+ + +G +  +
Sbjct: 134 AIDGLMTLIRGQKLPIFSGNGLPHDELAAQLVRQSSLGDSDNDDEKFAVVFAAMGVK-HD 192

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDS 258
           V +F +    ++ +   V+        P++ ++  P  A+T+AEY +  KG ++L+IL  
Sbjct: 193 VADFFQRTFAESGVSDHVITFINLANDPVVERLITPKVALTVAEYLAFEKGMHILVILTD 252

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +T FA ++RE++++ GE+P  +G+P  ++SEL  + ER G      G++T +  + +  D
Sbjct: 253 MTSFAEAMREVSSSKGEIPSRKGFPGYLYSELATIYERAGIVSGVNGSVTQIPILTMPND 312

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   PI D    I +G IVL+R L  +  YPP+  L S+SRL
Sbjct: 313 DITHPIPDLTGYITEGQIVLDRDLNGQSIYPPISVLPSLSRL 354


>gi|122893997|ref|YP_001004193.1| ATP synthase CF1 beta subunit [Ranunculus macranthus]
 gi|69214420|gb|AAZ03790.1| ATP synthase beta chain [Ranunculus macranthus]
 gi|85540811|gb|ABC70763.1| ATP synthase CF1 beta subunit [Ranunculus macranthus]
          Length = 498

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|37721025|gb|AAN32515.1| ATP synthase beta subunit [Narcissus elegans]
          Length = 497

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+++AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALSMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|17224729|gb|AAL37086.1| ATP synthase beta subunit [Dioscorea schimperiana]
          Length = 481

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|6467946|gb|AAF13245.1|AF197612_1 ATPase beta subunit [Podophyllum peltatum]
          Length = 485

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|6017794|gb|AAF01631.1| ATP synthase beta subunit [Corylopsis pauciflora]
          Length = 482

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL  D+I RF  
Sbjct: 205 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFXDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|75328429|sp|Q85V26|ATPB_HYANO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351933|emb|CAD48414.1| ATP synthase beta subunit [Hyacinthoides non-scripta]
          Length = 495

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|52788829|gb|AAU87387.1| ATP synthase beta chain [Calochlaena dubia]
          Length = 383

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|89242556|gb|ABD64636.1| ATPase beta subunit [Vriesea splendens]
          Length = 411

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 42  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 98

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 99  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGKDLYMEMKESG 158

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 159 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 218

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 219 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 276

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 277 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 336

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 337 KELQDIIAILG 347


>gi|7688035|emb|CAB89722.1| ATP synthase beta subunit [Sarcandra grandifolia]
          Length = 498

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|37721003|gb|AAN32504.1| ATP synthase beta subunit [Sisyrinchium montanum]
          Length = 495

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMKVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPLFIQLETKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|6467939|gb|AAF13238.1|AF197605_1 ATPase beta subunit [Chimonanthus praecox]
          Length = 487

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 215

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 216 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 275

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 276 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 333

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     
Sbjct: 334 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|8452708|emb|CAB89947.2| ATP synthase beta subunit [Oncidium excavatum]
          Length = 483

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMVQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|17224788|gb|AAL37115.1| ATP synthase beta subunit [Aletris farinosa]
          Length = 468

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NFGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 193

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  LG++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 194 GVINEKNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 251

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 252 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 309

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 310 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 369

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 370 QRYKELQDIIAILG 383


>gi|17224705|gb|AAL37074.1| ATP synthase beta subunit [Dioscorea decipiens]
          Length = 471

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|17224759|gb|AAL37101.1| ATP synthase beta subunit [Tacca chantieri]
          Length = 496

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 104 VTLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTRLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 221 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 280

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 338

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYQ 398

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 399 ELQDIIAILG 408


>gi|281420266|ref|ZP_06251265.1| ATP synthase F1, beta subunit [Prevotella copri DSM 18205]
 gi|281405761|gb|EFB36441.1| ATP synthase F1, beta subunit [Prevotella copri DSM 18205]
          Length = 508

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 155/331 (46%), Gaps = 43/331 (12%)

Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR++N +G+PIDG + L  KG  +  I  + P        ++   TGI+VID+  P   G
Sbjct: 95  GRMMNVIGQPIDGMNELDMKG--AYPIHREAPKFDELSTHKEMLATGIKVIDLLEPYMKG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------G 211
            +IG+F G+G+GK+ L+     +         + + VGER RE  + I D L       G
Sbjct: 153 GKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIKYG 212

Query: 212 DNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           +  +K++                     +V    +E P  R    L+ +T+AE F   G 
Sbjct: 213 EKFRKAMEEGKWDLSLVDPEELAKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGG 272

Query: 251 ------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +++  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  + 
Sbjct: 273 KNGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKN 330

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD    L+R +A  G YP VDPL S SR+ D  
Sbjct: 331 GSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKIASLGIYPAVDPLGSTSRILDPL 390

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                       +  L+ R+ E +DI  I G
Sbjct: 391 IVGKAHYDCAQRVKQLLQRYNELQDIIAILG 421


>gi|255514085|gb|EET90348.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 464

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 172/355 (48%), Gaps = 23/355 (6%)

Query: 26  ISSITSVYYTVTCL--SQYVCLGDFVVHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81
           I+ +TSV   V  +  + Y  L +  +  G  S   GQV+  R  L IV       G  +
Sbjct: 9   INRVTSVLLFVEGIKDAAYGELAEIRMEDG--SSITGQVLDTRNGLSIVQSFGETRGMNL 66

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
               + F      +S S    GR+ + +G+P D    +   +  ++I        +R+  
Sbjct: 67  EKTRVRFMGRTSHLSVSTDMLGRIFDGMGRPRDNGPPIYSNE-ELDINGSPINPYSREEP 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISL 194
            +  +TGI  ID    L  GQ++ +F+ SG+  + L +  AR       S+ F  ++   
Sbjct: 126 SEFIETGISTIDGMNTLVRGQKLPIFSASGLPHNRLAAQIARQAKILSSSEGF-SIVFGG 184

Query: 195 VGERGREV----REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKG 249
           +G    E     REF E      L+KSV+ +  S E  + R + P  A+T AEY + S+ 
Sbjct: 185 IGINSEEANFFKREFEET---GALEKSVMFLNISSEPSMERIILPRLALTTAEYLAYSQN 241

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL+IL  +T +  S+REI+    E+P  RGYP  ++++L  + ER G     KG+IT 
Sbjct: 242 MHVLVILTDMTNYCESLREISAAREEVPGRRGYPGYMYTDLSTIYERAGKINNRKGSITQ 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +  + + GD+   PI D    I +G IVL+R L  +G YP VD L S+SRL ++ 
Sbjct: 302 LPILTMPGDDITHPIPDLTGYITEGQIVLSRELNRKGVYPNVDVLLSLSRLMNQG 356


>gi|158602243|gb|ABW74588.1| ATP synthase beta subunit [Actaea pachypoda]
          Length = 478

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 30  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGLEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|156739830|gb|ABU93568.1| ATP synthase beta subunit [Cyclopeltis crenata]
          Length = 394

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|159227510|emb|CAJ80546.1| ATP synthase beta subunit [Physalis philadelphica]
          Length = 336

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIXGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|149390275|ref|YP_001294105.1| ATP synthase CF1 beta subunit [Chloranthus spicatus]
 gi|190358279|sp|A6MMC9|ATPB_CHLSC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|146744195|gb|ABQ43267.1| ATP synthase CF1 beta subunit [Chloranthus spicatus]
          Length = 498

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|17224717|gb|AAL37080.1| ATP synthase beta subunit [Dioscorea mcvaughii]
          Length = 482

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|46360710|gb|AAS89136.1| ATP synthase beta subunit [Porella navicularis]
          Length = 381

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 24/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
            W  ++ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 1   LW--KIFNVLGEPVD---NLGPVDAGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 55

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 56  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 115

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 116 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 175

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 176 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 233

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 234 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 292

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 293 KELQDIIAILG 303


>gi|11034789|gb|AAG27083.1| ATP synthase beta subunit [Dioscorea bulbifera]
          Length = 487

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|187933540|ref|YP_001887047.1| V-type ATP synthase subunit B [Clostridium botulinum B str. Eklund
           17B]
 gi|188588615|ref|YP_001921968.1| V-type ATP synthase subunit B [Clostridium botulinum E3 str. Alaska
           E43]
 gi|251778322|ref|ZP_04821242.1| V-type sodium ATPase, B subunit [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|238691644|sp|B2TP90|VATB_CLOBB RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|238691969|sp|B2UWY3|VATB_CLOBA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|187721693|gb|ACD22914.1| V-type sodium ATPase, B subunit [Clostridium botulinum B str.
           Eklund 17B]
 gi|188498896|gb|ACD52032.1| V-type sodium ATPase, B subunit [Clostridium botulinum E3 str.
           Alaska E43]
 gi|243082637|gb|EES48527.1| V-type sodium ATPase, B subunit [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 459

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 145/276 (52%), Gaps = 11/276 (3%)

Query: 98  SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV + +G+P D G D +   +  ++I  +    M R    +  +TG+  ID   
Sbjct: 82  SEDMLGRVFDGMGRPNDNGPDIIP--EKRVDINGEAINPMARDFPSEFIQTGVSAIDGLN 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210
            L  GQ++ VF+ +G+  + L +  AR      SD    ++ + +G    E + F +++ 
Sbjct: 140 TLVRGQKLPVFSAAGLPHAELAAQIARQAKVLNSDSKFAIVFAAIGITFEEAQFFQDEFK 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               + +SV+ +  + +  I R   P  A+T AEY +  KG  VL+I+  IT +A ++RE
Sbjct: 200 RTGAIDRSVLFMNLASDPAIERIATPRMALTCAEYLAYEKGMQVLVIMTDITNYAEALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           I+    E+P  RGYP  ++++L  L ER G    ++G+IT +  + +  D+   PI D  
Sbjct: 260 ISAARKEVPGRRGYPGYLYTDLSTLYERAGRLRGKEGSITQIPILTMPEDDKTHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             I +G I+L+R L ++G  PP+D L S+SRL DK 
Sbjct: 320 GYITEGQIILSRELYKKGIMPPIDVLPSLSRLKDKG 355


>gi|159227532|emb|CAJ80557.1| ATP synthase beta subunit [Physalis philadelphica]
          Length = 336

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ SE+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRIPSAVGYQPTLSSEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|17224713|gb|AAL37078.1| ATP synthase beta subunit [Dioscorea lanata]
          Length = 471

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|17224749|gb|AAL37096.1| ATP synthase beta subunit [Trichopus zeylanicus]
          Length = 475

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 90  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 206

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 207 INEKNIAESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 384

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 385 ELQDIIAILG 394


>gi|7708532|emb|CAB89958.1| ATP synthase beta subunit [Paeonia mlokosewitschii]
 gi|14718159|gb|AAK72818.1| ATP synthase beta subunit [Paeonia suffruticosa]
          Length = 481

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D++GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 41  KGQDSVGQPINVTWEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGSTLGR 100

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 101 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 217

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I  F  +  E++
Sbjct: 218 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVS 277

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 278 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 335

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 336 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 395

Query: 390 RLIGG 394
             I G
Sbjct: 396 IAILG 400


>gi|17224741|gb|AAL37092.1| ATP synthase beta subunit [Dioscorea guerrerensis]
          Length = 483

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|37721007|gb|AAN32506.1| ATP synthase beta subunit [Xeronema callistemon]
          Length = 497

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|7687976|emb|CAB89709.1| ATP synthase beta subunit [Eupomatia bennettii]
          Length = 498

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|20467415|gb|AAL27838.1| ATPase beta subunit [Picea asperata]
          Length = 443

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 69  GATLGRIFNVLGEPVD---NLGPVDARITSPIHRSAPAFTELDTKLSIFETGIKVVDLLA 125

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 126 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 185

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VL  +D+I RF  
Sbjct: 186 VIDEQNISESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLSFIDNIFRFVQ 245

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 246 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 303

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 304 PATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 362

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI  I    PG+D
Sbjct: 363 YKELQDIIAI----PGLD 376


>gi|18077569|emb|CAC88854.1| atpD beta synthase chain [Pseudomonas resinovorans]
          Length = 258

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 83  GNDFYHEMNDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|18077541|emb|CAC88840.1| atpD beta synthase chain [Pseudomonas aurantiaca]
          Length = 258

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TG++VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGMKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  ++ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPANDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|158602267|gb|ABW74600.1| ATP synthase beta subunit [Enemion biternatum]
          Length = 489

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 330 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|113910892|gb|ABI48178.1| ATPase beta subunit [Weymouthia cochlearifolia]
          Length = 456

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 184 IDEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|75702550|gb|ABA22226.1| ATP synthase F1 subcomplex alpha subunit [Anabaena variabilis ATCC
           29413]
          Length = 529

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 172/381 (45%), Gaps = 21/381 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G EI  G  V   GR  +I       GR
Sbjct: 83  GTVGIAQNLEEDNVGAVL-----------MGEGREIQEGSTVTATGRIAQIGVGEALIGR 131

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG+ IDG   + K   S  I S  P  + R+ V +  +TGI  ID   P+  GQR 
Sbjct: 132 VVDALGRAIDGKGDI-KASESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRE 190

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+ + +         D V + + +G++   V   ++       +  +VVV 
Sbjct: 191 LIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVA 250

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + E   L+ +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    
Sbjct: 251 AGASEPATLQFLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREA 310

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG I L+
Sbjct: 311 YPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLS 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P V+P  SVSR+   A +   KK+   +   + +F+   D++    +   +
Sbjct: 371 SDLFNAGIRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFD---DLQAFAQFASDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      + +   + + LKQS
Sbjct: 428 DKATQDQLARGQRLRELLKQS 448


>gi|149798657|gb|ABR32019.1| ATP synthase beta chain [Antrophyum latifolium]
          Length = 426

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|56675512|emb|CAB44028.2| H(+)-transporting ATP synthase [Fremontodendron californicum x
           Fremontodendron mexicanum]
          Length = 485

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I ++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSIISIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|17227501|ref|NP_484049.1| F0F1 ATP synthase subunit alpha [Nostoc sp. PCC 7120]
 gi|20141206|sp|P12405|ATPA_ANASP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|17134983|dbj|BAB77529.1| ATP synthase subunit alpha [Nostoc sp. PCC 7120]
          Length = 506

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 172/381 (45%), Gaps = 21/381 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G EI  G  V   GR  +I       GR
Sbjct: 60  GTVGIAQNLEEDNVGAVL-----------MGEGREIQEGSTVTATGRIAQIGVGEALIGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG+ IDG   + K   S  I S  P  + R+ V +  +TGI  ID   P+  GQR 
Sbjct: 109 VVDALGRAIDGKGDI-KASESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRE 167

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+ + +         D V + + +G++   V   ++       +  +VVV 
Sbjct: 168 LIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVA 227

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + E   L+ +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    
Sbjct: 228 AGASEPATLQFLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREA 287

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG I L+
Sbjct: 288 YPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLS 347

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P V+P  SVSR+   A +   KK+   +   + +F+   D++    +   +
Sbjct: 348 SDLFNAGIRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFD---DLQAFAQFASDL 404

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      + +   + + LKQS
Sbjct: 405 DKATQDQLARGQRLRELLKQS 425


>gi|323715434|gb|ADY04785.1| ATP synthase beta subunit [Mastixia caudatilimba]
          Length = 481

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|183206630|gb|ACC54513.1| ATP synthase beta subunit [Campanulastrum americanum]
          Length = 449

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 152/308 (49%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR  N LG+ ID   +LG  D   +  I    P  ++       F+TGI+V+D+  P  
Sbjct: 58  LGRXXNVLGEXID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYR 114

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214
            G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++     +  
Sbjct: 115 RGGKIGLFGGAGVGKTVLIMELINNIAKXHGGVSVFGGVGERTREGNDLYKEMKDSGVIN 174

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 175 EQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 234

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++     +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 235 EVSAXLXRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPAT 292

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +      +DE  K   S+   + R++E 
Sbjct: 293 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKEL 352

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 353 QDIITILG 360


>gi|158602263|gb|ABW74598.1| ATP synthase beta subunit [Clematis hexapetala]
          Length = 489

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|168699170|ref|ZP_02731447.1| F0F1 ATP synthase subunit beta [Gemmata obscuriglobus UQM 2246]
          Length = 479

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 162/310 (52%), Gaps = 24/310 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GRV N LG+PIDG  ++   +     + + PP  +    +     TGI+VID+ TPL  G
Sbjct: 98  GRVFNLLGQPIDGGGAVQTTE--KRAIHREPPKFDELSPKSEVLVTGIKVIDLLTPLARG 155

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE-------VREFIEDY 209
            + G+F G+G+GK+ +L+     +   KV     + + VGER RE       ++E   D 
Sbjct: 156 GKAGLFGGAGLGKTVILTELI--NRIAKVYKGYSVFAGVGERTREGNDLWLEMQETKTDA 213

Query: 210 LGDN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
             D    L+   +V    +E P  R    L+A+T+AE+F    G   LL +D+I RF+ +
Sbjct: 214 SADAKSVLESCAMVFGQMNEPPGARLRVALSALTMAEWFRDVTGTETLLFVDNIFRFSQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G IT+V +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLATEMGELQERI--TTTKNGAITSVQAVYVPADDPTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384
            +    LD  I L RS++E+G YP +DPLAS SRL D  +  +    V+  +  ++ R+ 
Sbjct: 332 ANTFQHLDAFIYLERSISEKGIYPAIDPLASNSRLLDPQFVGERHFAVADRVKRILQRYR 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|68139369|gb|AAY86049.1| ATP synthase beta subunit [Siparuna brasiliensis]
          Length = 456

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|306773436|emb|CBJ55294.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           pachyrrhachis]
          Length = 383

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 302 QDIIAI----PGLD 311


>gi|123325721|gb|ABM74485.1| ATP synthase beta subunit [Toona ciliata]
          Length = 466

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|110915658|gb|ABH02617.1| ATP synthase beta subunit [Hookerochloa hookeriana]
          Length = 471

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+   LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFXVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGXITSIQAVXVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|46360681|gb|AAS89122.1| ATP synthase beta subunit [Hymenophyton flabellatum]
          Length = 381

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 160/308 (51%), Gaps = 24/308 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           ++ N LG+P+D   +LG  D         P PA  +   +   F+TGI+V+D+  P   G
Sbjct: 3   KIFNVLGEPVD---NLGPVDTXTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 59

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD- 212
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D 
Sbjct: 60  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDE 118

Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 119 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 178

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 179 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 236

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 237 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 295

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 296 QDIIAILG 303


>gi|158602293|gb|ABW74613.1| ATP synthase beta subunit [Thalictrum minus]
          Length = 479

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|187764072|ref|YP_001876521.1| ATPase subunit 1 [Dictyostelium fasciculatum]
 gi|160688780|gb|ABX45195.1| ATPase subunit 1 [Dictyostelium fasciculatum]
          Length = 527

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 177/377 (46%), Gaps = 46/377 (12%)

Query: 53  GKNSDNLGQVIRINLDIVYIC---PVGIGEEISL-----------------GDLVF---- 88
           GKN++  G+V+ I   +V +     + +GE++                   G ++F    
Sbjct: 44  GKNANKFGRVLYIKDGVVKVSGLNSIKVGEKVEFIGKNLFGMALNLESTGVGIVIFGEDK 103

Query: 89  --HWG--------RFRISPSACWCGRVINALGKPIDG----DDSLGKGDLSMEIMSKVPP 134
             H G         F I       GRV++ LG+PIDG     D+     +S+E   K P 
Sbjct: 104 LIHEGVIVKRCEQNFAIKIDRAMLGRVVDVLGQPIDGGVAFKDTKTTRLISLE--RKAPG 161

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R+ V +   TG++++D   P+  GQR  +      GKS++      +   +K I+ +
Sbjct: 162 IVTRKSVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSSIAIDAILNQKTNKDIVCV 221

Query: 195 ---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              VG++   +R  +E   +  +LK S+VVV+T+ ++  L+ +AP T   I EYF  KG+
Sbjct: 222 YVSVGQKKSTIRRLVEMLNVKGSLKYSIVVVSTASDASPLQFLAPYTGCAIGEYFRDKGE 281

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN--IT 308
           + L+I D +++ A + R+++      P    YP  VF    RLLER      + GN  +T
Sbjct: 282 HALIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERSAKLNAKYGNGSLT 341

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A   V     + +  I  ++ SI DG I L + L  +G  P V+   SVSR+   A SA 
Sbjct: 342 AFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGLSVSRVGSAAQSAV 401

Query: 369 EKKLVSSLTHLIHRFEE 385
            KKL  +L   + ++ E
Sbjct: 402 MKKLAGALKLELAQYRE 418


>gi|12004165|gb|AAG43922.1|AF213791_1 ATP synthase beta subunit [Soldanella montana]
          Length = 487

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLXMEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|261286614|gb|ACX68551.1| ATP synthase [Bryopsis plumosa]
          Length = 363

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+ +D   +LG  + +  ++I    P  ++       F+TGI+V+D+  P   
Sbjct: 22  GRIFNVLGETVD---NLGPVETETCLQIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 78

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 79  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 138

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
           DN  +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 139 DNXSESKVALVYGQMNEPPGARMRVGLTAFTMAEYFRDIIKQDVLLFIDNIFRFVQAGSE 198

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ ++ V  D+  DP   + 
Sbjct: 199 VSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPAPATT 256

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E 
Sbjct: 257 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKQTLQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|158602295|gb|ABW74614.1| ATP synthase beta subunit [Thalictrum thalictroides]
          Length = 479

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|149798745|gb|ABR32063.1| ATP synthase beta chain [Radiovittaria gardneriana]
          Length = 426

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EKNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|113910890|gb|ABI48177.1| ATPase beta subunit [Thamnobryum alleghaniense]
          Length = 472

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V   ++E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQTNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|66276293|gb|AAY44161.1| ATP synthase beta subunit [Seyrigia humbertii]
          Length = 480

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 88  TTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 144

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 145 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 204

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 205 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 265 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R +
Sbjct: 323 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRXK 382

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 383 ELQDIIAILG 392


>gi|156530175|gb|ABU75184.1| AtpB [Samadera indica]
          Length = 498

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VL+ +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLVFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|317132956|ref|YP_004092270.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Ethanoligenens harbinense YUAN-3]
 gi|315470935|gb|ADU27539.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Ethanoligenens harbinense YUAN-3]
          Length = 466

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 165/322 (51%), Gaps = 32/322 (9%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117
           G+VI+I  +   I      + ISL +   H+ GR   I+ S    GR+ + +G+PIDG  
Sbjct: 42  GRVIQIEGEKAIIQVFEGTQSISLTNTHTHFQGRPMEIALSKEVLGRIFDGVGRPIDGLG 101

Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +    + D++   ++ V     R  +    +TGI  ID    L  GQ++ +F+GSG+  
Sbjct: 102 EIFPEQRRDINGNPINPVSRIYPRNYI----RTGISSIDALMTLIRGQKLPIFSGSGMPH 157

Query: 175 STLLSMFARSDCFDKVIISLVGERGRE---------VREFIEDYLGDNLKKS------VV 219
           + L     R          +  E G E         V+  + DY   + ++S      V+
Sbjct: 158 NELAVQIVRQS-------QIAAEEGSEFAIVFAAMGVKNDVADYFRRSFEESGVLQRVVM 210

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278
            +  S++  I R + P  A+T+AEY + + D ++L+++  +T +A ++RE +++ GE+P 
Sbjct: 211 FLNLSNDPIIERILTPRCALTVAEYLAFEKDMHILVVMTDMTSYAEALREFSSSKGEIPG 270

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +G+P  ++S+L  L ER G  +  KG++T +  + +  D+   PI D    I +G IVL
Sbjct: 271 RKGFPGYLYSDLASLYERAGMIKGRKGSVTQIPVLTMPNDDITHPIPDLTGYITEGQIVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRL 360
           +R+L + G YPPV  L S+SRL
Sbjct: 331 DRNLDQTGIYPPVGILPSLSRL 352


>gi|89242542|gb|ABD64629.1| ATPase beta subunit [Xanthosoma mafaffa]
          Length = 436

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AE+F    + +VLL +D+I RF  
Sbjct: 174 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|161567476|ref|YP_323121.2| F0F1 ATP synthase subunit alpha [Anabaena variabilis ATCC 29413]
 gi|115312236|sp|Q3M9W0|ATPA_ANAVT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 506

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 172/381 (45%), Gaps = 21/381 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G EI  G  V   GR  +I       GR
Sbjct: 60  GTVGIAQNLEEDNVGAVL-----------MGEGREIQEGSTVTATGRIAQIGVGEALIGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG+ IDG   + K   S  I S  P  + R+ V +  +TGI  ID   P+  GQR 
Sbjct: 109 VVDALGRAIDGKGDI-KASESRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRE 167

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+ + +         D V + + +G++   V   ++       +  +VVV 
Sbjct: 168 LIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVA 227

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + E   L+ +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    
Sbjct: 228 AGASEPATLQFLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREA 287

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG I L+
Sbjct: 288 YPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLS 347

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P V+P  SVSR+   A +   KK+   +   + +F+   D++    +   +
Sbjct: 348 SDLFNAGIRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFD---DLQAFAQFASDL 404

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      + +   + + LKQS
Sbjct: 405 DKATQDQLARGQRLRELLKQS 425


>gi|37720975|gb|AAN32490.1| ATP synthase beta subunit [Xiphidium caeruleum]
          Length = 489

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|37720953|gb|AAN32479.1| ATP synthase beta subunit [Anticlea elegans]
          Length = 483

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN+GQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 38  KGRDNVGQQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 98  IFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 154

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 155 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 214

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 215 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 274

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 275 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 332

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 333 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 392

Query: 390 RLIGG 394
             I G
Sbjct: 393 IAILG 397


>gi|20467399|gb|AAL27830.1| ATPase beta subunit [Larix kaempferi]
          Length = 425

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 30/320 (9%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 64  GATLGRIFNVLGEPVD---NLGPVDARITSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 120

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 121 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 178

Query: 217 SVVVVATS-------------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+   S             +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 179 SGVINEQSISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 238

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 239 VQAGSEVSALLGRMPSAVGYQPTLATEMGFLQERI--TSTKRGSITSIQAVYVPADDLTD 296

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  +  D   V +R LA +G YP VDPL S S +  + W   E+  ++   +   +
Sbjct: 297 PAPATTFAHSDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTL 355

Query: 381 HRFEETRDIRLIGGYRPGVD 400
            R++E +DI  I    PG+D
Sbjct: 356 QRYKELQDIIAI----PGLD 371


>gi|7688409|emb|CAB89741.1| ATP synthase beta subunit [Urtica dioica]
          Length = 481

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIXVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|17224765|gb|AAL37104.1| ATP synthase beta subunit [Burmannia coelestis]
          Length = 480

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 40  KSRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGSPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|4206600|gb|AAD11731.1| ATP synthase beta subunit [Skimmia anquetilia]
          Length = 474

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTSLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|159227612|emb|CAJ80597.1| ATP synthase beta subunit [Solanum lycopersicum]
          Length = 336

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S+   I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|65332604|gb|AAY42226.1| ATP synthase beta subunit [Anisophyllea meniaudi]
          Length = 479

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 86  GATLGRIFNVLGEPIDNLGPVNTRTTS-PIHRSAPAFIQLATKLSIFETGIKVVDLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G ++G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 145 RRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 204

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 205 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 265 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 323 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 382

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 383 LQDIIAILG 391


>gi|14718187|gb|AAK72832.1| ATP synthase beta subunit [Pontederia cordata]
          Length = 480

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGXLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|17224793|gb|AAL37117.1| ATP synthase beta subunit [Pandanus tectorius]
          Length = 504

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 110 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 166

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 167 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 226

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 227 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 286

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 287 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 344

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 345 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 404

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 405 KELQDIIAILG 415


>gi|42559016|gb|AAS20194.1| ATP synthase beta subunit [Helmholtzia glaberrima]
          Length = 489

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|6017826|gb|AAF01647.1| ATP synthase beta subunit [Coptis trifolia]
          Length = 478

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|42559056|gb|AAS20214.1| ATP synthase beta subunit [Rhipogonum elseyanum]
          Length = 489

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708191|emb|CAB90036.1| ATP synthase beta subunit [Catalpa bignonioides]
          Length = 490

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 48  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+ +D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 108 IFNVLGEAVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 224

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 225 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 284

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 402

Query: 390 RLIGG 394
             I G
Sbjct: 403 IAILG 407


>gi|7708472|emb|CAB89927.1| ATP synthase beta subunit [Lapageria rosea]
          Length = 494

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|158602257|gb|ABW74595.1| ATP synthase beta subunit [Caltha palustris]
          Length = 485

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|5758912|gb|AAD50886.1| ATP synthase beta subunit [Ledebouria socialis]
          Length = 496

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|32480850|ref|NP_862761.1| ATP synthase CF1 beta subunit [Calycanthus floridus var. glaucus]
 gi|75327712|sp|Q7YJW5|ATPB_CALFG RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|32399386|emb|CAD28728.1| ATPase beta subunit [Calycanthus floridus var. glaucus]
          Length = 498

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|158602247|gb|ABW74590.1| ATP synthase beta subunit [Anemone americana]
          Length = 493

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|123325725|gb|ABM74487.1| ATP synthase beta subunit [Wenzelia dolichophylla]
          Length = 466

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G + G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKTGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|159227268|emb|CAJ80425.1| ATP synthase beta subunit [Solanum sisymbriifolium]
          Length = 336

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINXENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|75336452|sp|Q9MRQ5|ATPB_CALFL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687966|emb|CAB89706.1| ATP synthase beta subunit [Calycanthus floridus]
          Length = 498

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|7708670|emb|CAB90014.1| ATP synthase beta subunit [Tacca chantieri]
          Length = 490

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 104 VTLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTRLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 221 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 280

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 338

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 398

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 399 ELQDIIAILG 408


>gi|37720957|gb|AAN32481.1| ATP synthase beta subunit [Cartonema philydroides]
          Length = 489

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|7708497|emb|CAB89936.1| ATP synthase beta subunit [Metrosideros nervulosa]
          Length = 488

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLXTXLSIFETGIXVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
            E +DI  I G
Sbjct: 397 XELQDIIAILG 407


>gi|7706852|emb|CAB90066.1| ATP synthase beta subunit [Apium graveolens]
          Length = 491

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 102 GTTLGRIFNVLGEPVD---NLGSVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+ EYF    + +V L +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMXEYFRDVNEQDVXLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGXEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +    +   + R+
Sbjct: 337 PXTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|24940200|emb|CAD43381.1| ATP synthase beta subunit [Myosotis arvensis]
          Length = 489

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|3850904|gb|AAC72144.1| ATP synthase beta subunit [Toronia toru]
          Length = 490

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|4206568|gb|AAD11715.1| ATP synthase beta subunit [Dictamnus sp. M.W.Chase-1820K]
          Length = 473

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 91  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTSLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|149384747|gb|ABR25182.1| ATP synthase beta chain [Salvinia cucullata]
          Length = 426

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 171/337 (50%), Gaps = 29/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NMGPVNSSTTFPIHRDAPAFTQLDTKLSIFETGIKVVDLSAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALSGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R  A +G YP VDPL S S +  + W    +       +   + R++E
Sbjct: 274 TFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHYDTAQGVKETLQRYKE 332

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 333 LQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|153809939|ref|ZP_01962607.1| hypothetical protein RUMOBE_00320 [Ruminococcus obeum ATCC 29174]
 gi|149834117|gb|EDM89197.1| hypothetical protein RUMOBE_00320 [Ruminococcus obeum ATCC 29174]
          Length = 509

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 170/369 (46%), Gaps = 10/369 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
           N G    +  + V I   G  E I  G  V   G+    P      GRV+NALG+PIDG 
Sbjct: 59  NFGMAQNLEENSVSIVIFGSDENIGEGQTVKRTGKVVSVPVGEAMIGRVVNALGQPIDGA 118

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +    + +K P    R+ V +  +TGI+ ID   P+  GQR  +      GK+T
Sbjct: 119 GPIDTKEFR-PVETKAPGICERRSVYQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTT 177

Query: 177 LLS-MFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +         D + I + +G++   V   +E+   +  +  ++VV AT+ ES  ++ +
Sbjct: 178 IATDTIINQKGKDVLCIYVAIGQKRSTVASLVENLTRNGAMNYTIVVAATASESSPMQYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + EYF ++G +VL+I D +++ A + R ++      P    YP  VF    RL
Sbjct: 238 APYAGCAMGEYFMNQGKDVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER    + E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V
Sbjct: 298 LERAAKLDDEHGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMPAV 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +P  SVSR+   A     KK+  +L  +  ++   R+++    +   +D      + Q  
Sbjct: 358 NPGISVSRVGGDAQIKAMKKVAGTLKLIYSQY---RELQSFAQFGSDLDADTKARLEQGA 414

Query: 412 IIYDFLKQS 420
            I + LKQS
Sbjct: 415 RIVEVLKQS 423


>gi|156739832|gb|ABU93569.1| ATP synthase beta subunit [Nephrolepis auriculata]
          Length = 391

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|42559052|gb|AAS20212.1| ATP synthase beta subunit [Philesia magellanica]
          Length = 488

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|46360691|gb|AAS89127.1| ATP synthase beta subunit [Metzgeria conjugata]
          Length = 382

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    ++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVNAVTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|170178361|gb|ACB10600.1| ATP synthase beta subunit [Cornus suecica]
          Length = 455

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 65  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 300 PATTFAHLDVTTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 359

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 360 KELQDIIAILG 370


>gi|158602265|gb|ABW74599.1| ATP synthase beta subunit [Delphinium tricorne]
          Length = 478

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGAKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++  V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQPVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|220917861|ref|YP_002493165.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254764984|sp|B8JE34|VATB_ANAD2 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|219955715|gb|ACL66099.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 477

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 28/315 (8%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP----AMNRQRVEKG---FK 146
           R+  S    GRV++ LG+P DG        L   +    P     A+N  R EK     +
Sbjct: 87  RLGVSRGMLGRVLDGLGRPADG--------LPPPVPEARPAIHGAALNVTRREKPSDFIE 138

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA-----RSDCFDKVIISLVGERGRE 201
           TG+  ID    L  GQ++ VF+ +G+  S L +        R      V+ + +G   RE
Sbjct: 139 TGVSAIDGMNTLVRGQKLPVFSCAGLPASRLAAQIVCQARVRGGEAFAVVFAAMGSPFRE 198

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSI 259
              F+E +     L ++VV +  +++ PI R M P  A+T AE+ +   G +VL++L  +
Sbjct: 199 YHAFLEAFRAAGVLARTVVFLNRAEDPPIERLMTPRCALTCAEHLAFVHGLHVLVVLTDV 258

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           T +  ++RE+A    E+P  RGYP  ++++L  + ER G      G++T +  + +  D+
Sbjct: 259 TSYCEALREVALAREEVPGRRGYPGYMYTDLATIFERAGRVRGRPGSLTQLPVLTMPDDD 318

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL----ADKAWSADEKKLVSS 375
              PI D    I +G IVL+R L   G YPP+D L S+SRL    A    + D+ + V+ 
Sbjct: 319 LTHPIPDLTGYITEGQIVLSRDLDRRGVYPPIDVLPSLSRLMGLGAGPGKTRDDHRPVAD 378

Query: 376 LTHLIHRFEETRDIR 390
              L   +   RD+R
Sbjct: 379 --QLYAFYARGRDVR 391


>gi|14587181|gb|AAK70491.1| ATP synthase beta subunit [Pontederia cordata]
          Length = 485

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +  +     F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGXLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|5001577|gb|AAD37035.1|AF092109_1 ATP synthase beta subunit [Podophyllum peltatum]
          Length = 492

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|99640406|emb|CAJ45071.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           cuspidata]
          Length = 493

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 400 QDIIAILG 407


>gi|7688335|emb|CAB89745.1| ATP synthase beta subunit [Tetramerista sp. Coode 7925]
          Length = 477

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               G++ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGQIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|5001587|gb|AAD37040.1|AF092114_1 ATP synthase beta subunit [Sarcandra glabra]
          Length = 474

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGXPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 197 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|241912854|gb|ACS72105.1| AtpB [Gomphichis traceyae]
          Length = 489

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P     +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|223986349|ref|ZP_03636358.1| hypothetical protein HOLDEFILI_03669 [Holdemania filiformis DSM
           12042]
 gi|223961698|gb|EEF66201.1| hypothetical protein HOLDEFILI_03669 [Holdemania filiformis DSM
           12042]
          Length = 470

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 144/271 (53%), Gaps = 18/271 (6%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N  G+PIDG   LG+   +  ++I  +    + R+       TGI  ID    L  
Sbjct: 87  GRIFNGAGEPIDG---LGEVYAEKRLDINGQPLNPVARKYPRNYINTGISAIDGLNTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR----SDCFDKVIISLVGERGREVREFIEDYLGDN--- 213
           GQ++ +F+GSG+    L     R    ++   K    + G  G  V+  + DY   +   
Sbjct: 144 GQKLPIFSGSGMPHDKLAVQIVRQAQLAEGDGKNFGIVFGAMG--VKNDVADYFKRSFEE 201

Query: 214 ---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
              ++K V+ +  S++  I R + P  A+T AEY +  K  ++L+IL  +T +  ++RE+
Sbjct: 202 TGVMEKVVMFINLSNDPIIERTLTPRCALTAAEYLAFEKNMHILVILTDMTSYCEALREV 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +++ GE+P  +GYP  ++S+L  L ER G  E  +G++T +  + +  D+   PI D   
Sbjct: 262 SSSKGEIPGRKGYPGYLYSDLASLYERAGIVEGVEGSVTQIPILTMPNDDITHPIPDLTG 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            I +G IVL+RSL + G YPP+  LAS+SRL
Sbjct: 322 YITEGQIVLDRSLHQTGIYPPIGVLASLSRL 352


>gi|14718254|gb|AAK72865.1| ATP synthase beta subunit [Trigonia nivea]
          Length = 455

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L  RI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQXRI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|5758904|gb|AAD50878.1| ATP synthase beta subunit [Pandanus utilis]
          Length = 496

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|229826069|ref|ZP_04452138.1| hypothetical protein GCWU000182_01433 [Abiotrophia defectiva ATCC
           49176]
 gi|229789811|gb|EEP25925.1| hypothetical protein GCWU000182_01433 [Abiotrophia defectiva ATCC
           49176]
          Length = 457

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 157/316 (49%), Gaps = 20/316 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRV 151
           I  S     RV + LG+PIDG    G   L  E        MN   R   E+  +TG+  
Sbjct: 79  IGVSEDMLSRVFDGLGRPIDG----GPEILPEERRDVAGLPMNPAARSYPEEFIQTGVSA 134

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205
           ID    L  GQ++ +F+GSG+  + L +  AR      +D    V+ + +G    E   F
Sbjct: 135 IDGLNTLVRGQKLPIFSGSGLPHAELAAQIARQAKVVGTDEPFAVVFAAMGITFEESNYF 194

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263
           +E +     + ++V+ +  +++  + R   P  A+T AE+ +  KG +VL+IL  IT +A
Sbjct: 195 VESFKETGAIDRAVLFMNLANDPAVERIATPKMALTTAEFLAFEKGMHVLVILTDITNYA 254

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++REI+    E+P  RGYP  ++++L  + ER G    + G+IT +  + +  D+   P
Sbjct: 255 DALREISAARKEVPGRRGYPGYMYTDLATMYERAGRQNGKNGSITMIPILTMPEDDKTHP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTH 378
           I D    I +G I+L+R L  +   PP++ L S+SRL DK        AD    ++ L  
Sbjct: 315 IPDLTGYITEGQIILSRDLYRKKIEPPINVLPSLSRLKDKGIGEGKTRADHANTMNQLFS 374

Query: 379 LIHRFEETRDIRLIGG 394
              R ++ +++ +I G
Sbjct: 375 AYARGKDAKELMVILG 390


>gi|149390449|ref|YP_001294277.1| ATP synthase CF1 beta subunit [Illicium oligandrum]
 gi|190358671|sp|A6MMV1|ATPB_ILLOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|147917402|gb|ABQ52526.1| ATP synthase CF1 beta subunit [Illicium oligandrum]
          Length = 498

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GSTLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPRIVGEKHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708270|emb|CAB90059.1| ATP synthase beta subunit [Ehrendorferia chrysantha]
          Length = 494

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMS--KVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P D   +LG  D           P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPXD---NLGPVDXXXXXXXXXSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGXVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|904090|gb|AAA70364.1| adenosine triphosphatase [Dicentra eximia]
          Length = 498

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMS--KVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P D   +LG  D           P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPXD---NLGPVDXXXXXXXXXSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGXVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|254373553|ref|ZP_04989040.1| ATP synthase subunit A [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151571278|gb|EDN36932.1| ATP synthase subunit A [Francisella novicida GA99-3549]
          Length = 513

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 176/383 (45%), Gaps = 30/383 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VAAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNR 138
           GD  +  GR    P      GRV++ALG PIDG     KGD++ ++ S +    P  + R
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDG-----KGDVATDLTSPIEKIAPGVIWR 139

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVG 196
           + V++  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G
Sbjct: 140 KSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIG 199

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   +   +        ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++
Sbjct: 200 QKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIV 259

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEK 302
            D +T+ A + R+I+      P    YP  VF    RLLER              G  + 
Sbjct: 260 YDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKG 319

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G++TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+  
Sbjct: 320 KTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGG 379

Query: 363 KAWSADEKKLVSSLTHLIHRFEE 385
            A +   KKL   +   + ++ E
Sbjct: 380 AAQTKIIKKLGGGIRLALAQYRE 402


>gi|89242530|gb|ABD64623.1| ATPase beta subunit [Siparuna brasiliensis]
          Length = 436

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|160881565|ref|YP_001560533.1| V-type ATP synthase subunit B [Clostridium phytofermentans ISDg]
 gi|160430231|gb|ABX43794.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Clostridium phytofermentans ISDg]
          Length = 461

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 148/272 (54%), Gaps = 20/272 (7%)

Query: 103 GRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           GRV N +G+PIDG  S+    + +++ E ++   P M R+      +TGI  ID  T L 
Sbjct: 87  GRVFNGVGEPIDGLGSIIPEMRRNVNGEPLN---PCM-REYPRNYIRTGISAIDGLTTLI 142

Query: 160 HGQRIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215
            GQ++ +F+G+G+    L    ++  +  D  D+  + +    G  V+  + D+     +
Sbjct: 143 RGQKLPIFSGNGLPHDELAAQIVTQASLGDDSDEQFVIVFAAMG--VKYDVADFFRRTFE 200

Query: 216 KS-----VVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
           +S     VV+       P++ ++  P  A+T AEY +  KG +VL+IL  +T FA ++RE
Sbjct: 201 ESGANSHVVMYLNLASDPVIERLITPKVALTAAEYLAYEKGMHVLVILTDMTSFAEALRE 260

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           +++  GE+P  +GYP  ++SE   + ER G  +  KG++T V  + +  D+   PI D  
Sbjct: 261 VSSAKGEIPSRKGYPGYLYSEFSTIYERAGIVKGCKGSVTQVPILTMPNDDITHPIPDLT 320

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             I +G IVL RSL ++  YPP++ L S+SRL
Sbjct: 321 GYITEGQIVLERSLYQKNIYPPINVLPSLSRL 352


>gi|86157629|ref|YP_464414.1| V-type ATP synthase subunit B [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123764270|sp|Q2IQ94|VATB_ANADE RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|85774140|gb|ABC80977.1| Sodium-transporting two-sector ATPase [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 475

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 155/315 (49%), Gaps = 28/315 (8%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP----AMNRQRVEKG---FK 146
           R+  +    GRV++ LG+P DG        L   +    P     A+N  R EK     +
Sbjct: 87  RLGVARGMLGRVLDGLGRPADG--------LPPPVPEARPAIHGAALNVTRREKPSDFIE 138

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA-----RSDCFDKVIISLVGERGRE 201
           TG+  ID    L  GQ++ VF+ +G+  S L +        R      V+ + +G   RE
Sbjct: 139 TGVSAIDGMNTLVRGQKLPVFSCAGLPASRLAAQIVCQARVRGGEPFAVVFAAMGSPFRE 198

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSI 259
              F+E +     L ++VV +  +++ PI R M P  A+T AE+ + + G +VL++L  +
Sbjct: 199 YHAFLEAFRAAGVLDRTVVFLNRAEDPPIERLMTPRCALTCAEHLAFTHGLHVLVVLTDV 258

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           T +  ++RE+A    E+P  RGYP  ++++L  + ER G      G++T +  + +  D+
Sbjct: 259 TSYCEALREVALAREEVPGRRGYPGYMYTDLATIFERAGRVRGRPGSLTQLPVLTMPDDD 318

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL----ADKAWSADEKKLVSS 375
              PI D    I +G IVL+R L   G YPP+D L S+SRL    A    + D+ + V+ 
Sbjct: 319 LTHPIPDLTGYITEGQIVLSRDLDRRGVYPPIDVLPSLSRLMGLGAGPGKTRDDHRPVAD 378

Query: 376 LTHLIHRFEETRDIR 390
              L   +   RD+R
Sbjct: 379 --QLYAFYARGRDVR 391


>gi|17224707|gb|AAL37075.1| ATP synthase beta subunit [Dioscorea nipponica]
          Length = 474

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|3850932|gb|AAC72158.1| ATP synthase beta subunit [Protea neriifolia]
          Length = 490

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P++   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVE---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|159232288|emb|CAJ80659.1| ATP synthase beta subunit [Iochroma australe]
          Length = 336

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PXTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|27435885|gb|AAO13269.1| ATP synthase beta subunit [Magnolia stellata]
          Length = 489

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|166836596|gb|ABY90530.1| ATP synthase beta chain [Pilularia globulifera]
          Length = 395

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRTPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|42559044|gb|AAS20208.1| ATP synthase beta subunit [Calochortus apiculatus]
          Length = 466

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 382

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 383 KELQDIIAILG 393


>gi|6467940|gb|AAF13239.1|AF197606_1 ATPase beta subunit [Mauloutchia chapelieri]
          Length = 487

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|7687980|emb|CAB89710.1| ATP synthase beta subunit [Gyrocarpus americanus]
          Length = 498

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|21684911|emb|CAD11582.1| ATP synthase beta subunit [Rapatea circasiana]
          Length = 492

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGDPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|5758864|gb|AAD50838.1| ATP synthase beta subunit [Colocasia esculenta]
          Length = 496

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AE+F    + +VLL +D+I RF  +
Sbjct: 222 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|904123|gb|AAA70374.1| adenosine triphosphatase [Lardizabala biternata]
          Length = 498

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTXTXSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|156739804|gb|ABU93555.1| ATP synthase beta subunit [Ctenitopsis fuscipes]
          Length = 394

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 166/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L++      A++     V   +  ER RE  +   +     
Sbjct: 91  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINERNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 210 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 326

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 327 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 362


>gi|149798659|gb|ABR32020.1| ATP synthase beta chain [Argyrochosma limitanea]
          Length = 426

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 166/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|21633415|gb|AAM52182.1| ATP synthase beta subunit [Jacquemontia blanchetii]
          Length = 488

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F TGI+V+D+  
Sbjct: 100 GSTLGRIFNVLGEPVD---NLGPVDTXTTSPIHRSAPAFTQLDTKLSIFVTGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 157 PYPRGGKIGLFGGAGVGKTVLIMELINNIAQAHGGVSVFGGVGERTREGNDLYM--EMKE 214

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 215 SGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 274

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 275 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 332

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + 
Sbjct: 333 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQ 392

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 393 RYKELQDIIAILG 405


>gi|7708161|emb|CAB90022.1| ATP synthase beta subunit [Barbacenia elegans]
          Length = 485

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLNMEMKES 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 210 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 387

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 388 YKELQDIIAILG 399


>gi|159227262|emb|CAJ80422.1| ATP synthase beta subunit [Solanum humboldti]
 gi|159232318|emb|CAJ80674.1| ATP synthase beta subunit [Browallia americana]
          Length = 336

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|75326849|sp|Q7HHY7|ATPB_LICGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236710|gb|AAK14660.1| ATP synthase beta subunit [Licuala grandis]
 gi|13236714|gb|AAK14662.1| ATP synthase beta subunit [Pritchardiopsis jeanneneyi]
          Length = 498

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  S LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFSHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|3850954|gb|AAC72169.1| ATP synthase beta subunit [Lambertia formosa]
          Length = 490

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P  
Sbjct: 97  ATLGRIFNVLGEPVDNLGPVATRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     + 
Sbjct: 156 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVI 214

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|255535432|ref|YP_003095803.1| F0F1 ATP synthase subunit beta [Flavobacteriaceae bacterium
           3519-10]
 gi|255341628|gb|ACU07741.1| ATP synthase beta chain [Flavobacteriaceae bacterium 3519-10]
          Length = 502

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 160/349 (45%), Gaps = 41/349 (11%)

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   GR    P+     GR+ N +G  IDG   + K +  + I  + P         
Sbjct: 71  GQEVISQGRQITMPTGDAVYGRLFNVVGDAIDGISQVSKEN-GLPIHREAPKFDQLSTSA 129

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERG 199
           +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER 
Sbjct: 130 EVLFTGIKVIDLVEPYSKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERT 189

Query: 200 RE----VREFIEDYL---GDNL---------------------KKSVVVVATSDESPILR 231
           RE    +RE +E  +   GD                        K   V    +E P  R
Sbjct: 190 REGNDLLREMLESGIIKYGDEFMHSMENGGWDLSKVDLEEMKDSKCTFVFGQMNEPPGAR 249

Query: 232 KMAPLTAVTIAEYF-----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
               L+ +TIAE F       +G +VL  +D+I RF  +  E++   G +P A GY  ++
Sbjct: 250 ARVALSGLTIAENFRDGDGQGQGRDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTL 309

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            SE+  + ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R +A  G
Sbjct: 310 ASEMGAMQERI--TSTKNGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLDRKIASLG 367

Query: 347 RYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            YP VDPLAS SR L  +   A+       +  ++ +++  +DI  I G
Sbjct: 368 IYPAVDPLASTSRILTPEILGAEHYDCAQRVKEILQKYKALQDIIAILG 416


>gi|149384725|gb|ABR25171.1| ATP synthase beta chain [Polypodium vulgare]
          Length = 426

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 167/340 (49%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|37720941|gb|AAN32473.1| ATP synthase beta subunit [Scheuchzeria palustris]
          Length = 481

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 40  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|37720967|gb|AAN32486.1| ATP synthase beta subunit [Philydrum lanuginosum]
          Length = 497

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|7708470|emb|CAB89926.1| ATP synthase beta subunit [Lambertia inermis]
          Length = 486

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P  
Sbjct: 93  ATLGRIFNVLGEPVDNLGPVATRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 151

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     + 
Sbjct: 152 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVI 210

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 211 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 271 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 328

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E
Sbjct: 329 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKE 388

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 389 LQDIIAILG 397


>gi|5001569|gb|AAD37031.1|AF092105_1 ATP synthase beta subunit [Hedera helix]
          Length = 488

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D          S  I    P  +        F+TGI+V+D+  P 
Sbjct: 94  GTTLGRIFNVLGEPVDNXXXXXXXTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 152

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 153 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 212

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 213 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 272

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 273 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 330

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 331 TTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 390

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 391 LQDIIAILG 399


>gi|5758909|gb|AAD50883.1| ATP synthase beta subunit [Rhipogonum elseyanum]
          Length = 496

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|159227312|emb|CAJ80447.1| ATP synthase beta subunit [Solanum mitlense]
 gi|159227314|emb|CAJ80448.1| ATP synthase beta subunit [Solanum mauritianum]
 gi|159227322|emb|CAJ80452.1| ATP synthase beta subunit [Solanum hispidum]
 gi|159227330|emb|CAJ80456.1| ATP synthase beta subunit [Solanum furfuraceum]
          Length = 336

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|183206564|gb|ACC54480.1| ATP synthase beta subunit [Symphyandra pendula]
          Length = 490

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 175/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 46  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 105

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+PID   +LG  D   +  I    P  ++       F+TGI+V+D+  P   G 
Sbjct: 106 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 162

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 163 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEK 221

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 222 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 281

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+   P   +  
Sbjct: 282 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLPAPPPSTPF 339

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +      +DE  +   S+   + R++E +D
Sbjct: 340 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 399

Query: 389 IRLIGG 394
           I  I G
Sbjct: 400 IITILG 405


>gi|7582350|gb|AAF64290.1| ATP synthase beta subunit [Iriartea deltoidea]
          Length = 498

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|5758890|gb|AAD50864.1| ATP synthase beta subunit [Helmholtzia acorifolia]
          Length = 496

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|159227596|emb|CAJ80589.1| ATP synthase beta subunit [Nicandra physalodes]
 gi|159227598|emb|CAJ80590.1| ATP synthase beta subunit [Nicandra physalodes]
 gi|159227600|emb|CAJ80591.1| ATP synthase beta subunit [Nicandra physalodes]
 gi|159227602|emb|CAJ80592.1| ATP synthase beta subunit [Nicandra physalodes]
 gi|159227606|emb|CAJ80594.1| ATP synthase beta subunit [Nicandra physalodes]
 gi|159227610|emb|CAJ80596.1| ATP synthase beta subunit [Nicandra physalodes]
 gi|159232268|emb|CAJ80649.1| ATP synthase beta subunit [Nicandra physalodes]
 gi|159232270|emb|CAJ80650.1| ATP synthase beta subunit [Nicandra physalodes]
          Length = 336

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 153/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|5758888|gb|AAD50862.1| ATP synthase beta subunit [Heliconia paka]
          Length = 496

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRISNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|197123070|ref|YP_002135021.1| V-type ATP synthase subunit B [Anaeromyxobacter sp. K]
 gi|238689877|sp|B4UH38|VATB_ANASK RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|196172919|gb|ACG73892.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaeromyxobacter sp. K]
          Length = 477

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 30/365 (8%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCG 103
           G+   H     +  GQVI ++ D   V +     G   +  ++       R+  S    G
Sbjct: 37  GEPEAHGRAAEERSGQVIALSRDRIAVQVLEETRGLAPARAEVTLTGQVARLGVSRGMLG 96

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPP----AMNRQRVEKG---FKTGIRVIDIFT 156
           RV++ LG+P DG        L   +    P     A+N  R EK     +TG+  ID   
Sbjct: 97  RVLDGLGRPADG--------LPPPVPEARPAIHGAALNVTRREKPSDFIETGVSAIDGMN 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFA-----RSDCFDKVIISLVGERGREVREFIEDYLG 211
            L  GQ++ VF+ +G+  S L +        R      V+ + +G   RE   F++ +  
Sbjct: 149 TLVRGQKLPVFSCAGLPASRLAAQIVCQARVRGGEPFAVVFAAMGSPFREYHAFLDAFRA 208

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
              L ++VV +  +++ PI R M P  A+T AE+ + + G +VL++L  +T +  ++RE+
Sbjct: 209 AGVLDRTVVFLNRAEDPPIERLMTPRCALTCAEHLAFAHGLHVLVVLTDVTSYCEALREV 268

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A    E+P  RGYP  ++++L  + ER G      G++T +  + +  D+   PI D   
Sbjct: 269 ALAREEVPGRRGYPGYMYTDLATIFERAGRVRGRPGSLTQLPVLTMPDDDLTHPIPDLTG 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL----ADKAWSADEKKLVSSLTHLIHRFEE 385
            I +G IVL+R L   G YPP+D L S+SRL    A    + D+ + V+    L   +  
Sbjct: 329 YITEGQIVLSRDLDRRGVYPPIDVLPSLSRLMGLGAGPGKTRDDHRPVAD--QLYAFYAR 386

Query: 386 TRDIR 390
            RD+R
Sbjct: 387 GRDVR 391


>gi|162448011|ref|YP_001621143.1| V-type H+-transporting ATPase subunit B [Acholeplasma laidlawii
           PG-8A]
 gi|161986118|gb|ABX81767.1| V-type H+-transporting ATPase, subunit B [Acholeplasma laidlawii
           PG-8A]
          Length = 478

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 16/329 (4%)

Query: 53  GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALG 110
           G N    G+VI I+ DIV +      + + L D+   F     R+  S    GR  N  G
Sbjct: 35  GNNEVRHGRVIEISGDIVAVEVFEGTDGMMLKDVYTKFLGHPLRMGLSKEVLGRTFNGAG 94

Query: 111 KPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
            PIDG   LG    ++SM++  +    ++R+  +   +TGI  ID    L  GQ++ +F+
Sbjct: 95  LPIDG---LGPIFSNVSMDVNGESMNPVSRRYPKNFIQTGISSIDTLATLIRGQKLPIFS 151

Query: 169 GSGIGKSTL-LSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDNLKKSVVVV 221
            +G+  + L + +   +   +K      ++ + +G +    + F   +   ++   V + 
Sbjct: 152 ATGLTHNELAVEIVKHAKIAEKEHEKFCIVFAAMGVKHDVAQYFKSQFEQAHVMDRVAMF 211

Query: 222 ATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
             +   PI+ R +AP  A+T AEY +   D +VL+I+  +T +  ++RE +++ GE+P  
Sbjct: 212 LNTASEPIVERILAPRAALTTAEYLAFHEDYHVLVIMTDMTSYCEALREFSSSKGEIPGR 271

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP  ++S+L  L ER G  E + G++T +  + +  ++   PI D    I +G IVL+
Sbjct: 272 KGYPGYMYSDLSSLYERAGMIEGKSGSVTQIPILTMPNNDITHPIPDLTGYITEGQIVLD 331

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSAD 368
             L + G +PP+  L S+SRL      AD
Sbjct: 332 GQLKQRGIFPPISVLPSLSRLMKDGIGAD 360


>gi|89242534|gb|ABD64625.1| ATPase beta subunit [Lardizabala biternata]
          Length = 436

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|32815647|gb|AAP88220.1| ATP synthase beta subunit [Cyclocarya paliurus]
          Length = 457

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 78  GATLGRIFNVLGEPVDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 136

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 137 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 196

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 197 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 256

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 257 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPA 314

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 315 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 374

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 375 LQDIIAILG 383


>gi|159227616|emb|CAJ80599.1| ATP synthase beta subunit [Witheringia solanacea]
          Length = 336

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|156530091|gb|ABU75142.1| AtpB [Zanthoxylum sp. Clayton 15]
          Length = 480

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ + LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFDVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|5758893|gb|AAD50867.1| ATP synthase beta subunit [Hyacinthus orientalis]
          Length = 496

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|168334078|ref|ZP_02692294.1| V-type ATP synthase subunit B [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 457

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 167/345 (48%), Gaps = 16/345 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+VI+I+ D V +        IS  ++   F      I+ S    GR  N +GKPIDG  
Sbjct: 42  GKVIKIDGDYVVVQVFEGTTGISTENVAVQFTGKPLEIALSPDILGRTFNGVGKPIDGGL 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           S+        I  +    + RQ      +TGI  ID    L  GQ++ +F+G+G+  + +
Sbjct: 102 SIASTHRE-NINGRPINPVARQYPRNFIQTGISAIDALMTLIRGQKLPIFSGNGMAHNEI 160

Query: 178 LSMF--------ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPI 229
                       A ++ F  ++   +G R  +   F + +        VV+     + PI
Sbjct: 161 AVQIVNQAKIEGATAENF-AIVFGAMGVRHDDANYFRKSFEESGALDHVVMYLNLADDPI 219

Query: 230 LRKMA-PLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           + +++ P TA+T AEY +  K  +VL+++  +T +A ++RE+++  GE+P  +GYP  ++
Sbjct: 220 VERISTPRTALTAAEYLAFEKNMHVLVVITDMTSYAEALREMSSIRGEVPSRKGYPGYLY 279

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           S+L  + ER G  E ++G+IT +  + +  D+   PI D    I +G IVL+R L ++  
Sbjct: 280 SDLSTIYERAGMLENKEGSITLIPILTMPNDDITHPIPDLTGFITEGQIVLSRELNQKQI 339

Query: 348 YPPVDPLASVSRLADKAWSA--DEKKLVSSLTHLIHRFEETRDIR 390
           YPP+  L S+SRL      A    +  V     L   +   +DIR
Sbjct: 340 YPPIAILPSLSRLMKDGIGAGYTREDHVDLTNQLFAAYSHVQDIR 384


>gi|159227608|emb|CAJ80595.1| ATP synthase beta subunit [Nicandra physalodes]
          Length = 336

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 153/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSXKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|75328431|sp|Q85V28|ATPB_HYAOR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351929|emb|CAD48412.1| ATP synthase beta subunit [Hyacinthus orientalis]
          Length = 495

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14587179|gb|AAK70490.1| ATP synthase beta subunit [Anigozanthos flavidus]
          Length = 498

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|37720983|gb|AAN32494.1| ATP synthase beta subunit [Blandfordia punicea]
          Length = 497

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G    E  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNXAXAHGGVSVFGGVGERTXEGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|904156|gb|AAA70388.1| adenosine triphosphatase [Stauntonia hexaphylla]
          Length = 498

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|52788848|gb|AAU87394.1| ATP synthase beta chain [Loxoma cunninghamii]
          Length = 383

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 28/315 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVID 123

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 PQDIIAI----PGLD 311


>gi|241912888|gb|ACS72122.1| AtpB [Prescottia stachyodes]
          Length = 489

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG   +  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVHIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|159227264|emb|CAJ80423.1| ATP synthase beta subunit [Solanum sisymbriifolium]
 gi|159227266|emb|CAJ80424.1| ATP synthase beta subunit [Solanum sisymbriifolium]
 gi|159227270|emb|CAJ80426.1| ATP synthase beta subunit [Solanum sisymbriifolium]
 gi|159227274|emb|CAJ80428.1| ATP synthase beta subunit [Solanum sisymbriifolium]
 gi|159227282|emb|CAJ80432.1| ATP synthase beta subunit [Solanum macrocarpon]
 gi|159227284|emb|CAJ80433.1| ATP synthase beta subunit [Solanum macrocarpon]
 gi|159227288|emb|CAJ80435.1| ATP synthase beta subunit [Solanum macrocarpon]
 gi|159227290|emb|CAJ80436.1| ATP synthase beta subunit [Solanum macrocarpon]
 gi|159227292|emb|CAJ80437.1| ATP synthase beta subunit [Solanum macrocarpon]
 gi|159227306|emb|CAJ80444.1| ATP synthase beta subunit [Solanum tequilense]
 gi|159227308|emb|CAJ80445.1| ATP synthase beta subunit [Solanum renschii]
 gi|159227310|emb|CAJ80446.1| ATP synthase beta subunit [Solanum racemosum]
 gi|159227318|emb|CAJ80450.1| ATP synthase beta subunit [Solanum lasiophyllum]
 gi|159227324|emb|CAJ80453.1| ATP synthase beta subunit [Solanum hirtum]
 gi|159227328|emb|CAJ80455.1| ATP synthase beta subunit [Solanum giganteum]
 gi|159227334|emb|CAJ80458.1| ATP synthase beta subunit [Solanum erianthum]
 gi|159227338|emb|CAJ80460.1| ATP synthase beta subunit [Solanum anomalum]
 gi|159227446|emb|CAJ80514.1| ATP synthase beta subunit [Jaltomata sp. P101]
 gi|159227566|emb|CAJ80574.1| ATP synthase beta subunit [Jaltomata sp. P021]
 gi|159227636|emb|CAJ80609.1| ATP synthase beta subunit [Solanum sisymbriifolium]
 gi|159232250|emb|CAJ80640.1| ATP synthase beta subunit [Solanum trisectum]
 gi|159232252|emb|CAJ80641.1| ATP synthase beta subunit [Solanum trisectum]
 gi|159232306|emb|CAJ80668.1| ATP synthase beta subunit [Solanum betaceum]
          Length = 336

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|149798713|gb|ABR32047.1| ATP synthase beta chain [Paragymnopteris marantae]
          Length = 426

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 28/316 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVD 400
           E +DI  I    PG+D
Sbjct: 332 ELQDIIAI----PGLD 343


>gi|75336622|sp|Q9MU30|ATPB_MYRFG RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688027|emb|CAB89717.1| ATP synthase beta subunit [Myristica fragrans]
 gi|14718145|gb|AAK72811.1| ATP synthase beta subunit [Myristica fragrans]
          Length = 498

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7688333|emb|CAB89744.1| ATP synthase beta subunit [Ternstroemia stahlii]
 gi|14718246|gb|AAK72861.1| ATP synthase beta subunit [Ternstroemia stahlii]
          Length = 455

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGTPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERXREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    L A+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLXALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|32815637|gb|AAP88215.1| ATP synthase beta subunit [Ostryopsis davidiana]
          Length = 457

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 78  GATLGRIFNVLGEPVDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 136

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 137 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 196

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 197 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 256

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 257 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPAPA 314

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 315 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 374

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 375 LQDIIAILG 383


>gi|62902829|gb|AAY19329.1| ATP synthase beta subunit [Parnassia trinervis]
          Length = 474

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYXEMKES 204

Query: 212 -----DNLKKSVVVVATS--DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                 N+  S V +A    +E P  R    L A+T AEYF    + +VLL +D+I RF 
Sbjct: 205 GVINEQNIXXSXVALAYGQMNEPPGARMRVGLXALTXAEYFRDVNEQDVLLXIDNIFRFV 264

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 265 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 322

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 323 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 382

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 383 YKELQDIIAILG 394


>gi|149384485|gb|ABR25065.1| ATP synthase beta chain [Leptolepia novae-zelandiae]
          Length = 426

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + + + +  I    P           F+TGI+V+D+  P  
Sbjct: 37  TTLGRISNVLGEPVDNPGPV-QSNTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +     R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTSQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|159232314|emb|CAJ80672.1| ATP synthase beta subunit [Calibrachoa parviflora]
          Length = 336

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 XTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|159232278|emb|CAJ80654.1| ATP synthase beta subunit [Lycianthes dejecta]
          Length = 336

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|119350561|gb|ABL63231.1| AtpB [Treubaria setigera]
          Length = 392

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   + ++ I  + P  ++       F+TGI+V+D+  P   G
Sbjct: 38  LGRIFNVLGEPVDNMGPVETKE-TLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 96

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKSV 218
            +IG+F G+G+GK+ L+     +       +S+   VGER RE  +   +     +K+S 
Sbjct: 97  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTE-----MKESG 151

Query: 219 VVVATSDESPILRKM-------------APLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           V+V                           LTA+T+AEYF      +VL  +D+I RF  
Sbjct: 152 VIVEKXXXXXXXXXXXXXXXXXXXXXXRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQ 211

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 212 AGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPA 269

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   EK  +   ++   + R
Sbjct: 270 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYETAQNVKQTLQR 328

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 329 YKELQDIIAILG 340


>gi|37720959|gb|AAN32482.1| ATP synthase beta subunit [Dasypogon hookeri]
          Length = 488

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708664|emb|CAB90004.1| ATP synthase beta subunit [Stewartia pseudocamellia]
          Length = 482

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               G++ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGQIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|312880583|ref|ZP_07740383.1| H(+)-transporting two-sector ATPase [Aminomonas paucivorans DSM
           12260]
 gi|310783874|gb|EFQ24272.1| H(+)-transporting two-sector ATPase [Aminomonas paucivorans DSM
           12260]
          Length = 456

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 29/333 (8%)

Query: 84  GDLVFHWGRFR---------ISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVP 133
           GDLV    R R         ++PS    GR    LG+P DG   + G   +++  +   P
Sbjct: 62  GDLVPATTRLRFLGKPLEMPLAPS--ILGRTFTGLGEPRDGCGPVYGGKRVNVNGLPLNP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCF 187
             M R+       TGI  ID  T L  GQ++ +F+G+G+  + L    A       ++ F
Sbjct: 120 --MARKYPRDFIHTGISAIDTLTTLIRGQKLPIFSGNGLPHNQLAVQIATQSRLVGAENF 177

Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFS 246
             V  + +G +  +   F ++        S+V      + P++ ++A P  A+T AEY +
Sbjct: 178 -AVCFAGIGIKHDDAAFFTQELSVKGRTNSIVTFLNLADDPVIERIATPRMALTAAEYLA 236

Query: 247 SK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            + G +VL+I+  +T +  ++RE+   +GE+P  +GYP  ++S+L  L ER G     KG
Sbjct: 237 YELGMHVLVIITDMTNYCEALRELGVAAGEVPSRKGYPAYMYSDLASLYERAGVVRDLKG 296

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD--- 362
           ++T +  + +  D+   PI D    I +G IVL+R L  +G YPP+D L S+SRL     
Sbjct: 297 SVTQLPILTMPNDDITHPIPDLTGFITEGQIVLSRELDAKGIYPPIDVLTSLSRLMKDGI 356

Query: 363 -KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            K ++ D+   V+S   L   +   +DIR + G
Sbjct: 357 GKGYTRDDHPGVAS--QLFASYSRVQDIRSLAG 387


>gi|159227614|emb|CAJ80598.1| ATP synthase beta subunit [Anthocercis angustifolia]
          Length = 336

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|13236774|gb|AAK14692.1| ATP synthase beta subunit [Drymophloeus litigiosus]
          Length = 498

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|148787947|gb|ABR12223.1| ATP synthase beta subunit [Helmholtzia acorifolia]
          Length = 427

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 35  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 151

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 152 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 211

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 329

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 330 ELQDIIAILG 339


>gi|14718130|gb|AAK72804.1| ATP synthase beta subunit [Milligania stylosa]
          Length = 491

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|312285251|gb|ADQ64367.1| ATP synthase beta subunit [Parabaena sagittata]
          Length = 467

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDNRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|194267335|gb|ACF35654.1| ATP synthase beta subunit [Lambertia formosa]
          Length = 494

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P  
Sbjct: 105 ATLGRIFNVLGEPVDNLGPVATRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     + 
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVI 222

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|159232196|emb|CAJ80613.1| ATP synthase beta subunit [Salpiglossis sinuata]
          Length = 335

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|12004157|gb|AAG43918.1|AF213787_1 ATP synthase beta subunit [Primula sieboldii]
 gi|57868918|gb|AAW57455.1| ATP synthase alpha subunit [Primula elatior]
          Length = 463

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 80  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 195

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 196 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 255

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 256 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 313

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 314 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQR 373

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 374 YKELQDIIAILG 385


>gi|75336398|sp|Q9MRI8|ATPB_GALBE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687978|emb|CAB89711.1| ATP synthase beta subunit [Galbulimima belgraveana]
          Length = 498

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|58081520|gb|AAW65235.1| AtpB [Symphyogyna undulata]
          Length = 382

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 153/303 (50%), Gaps = 18/303 (5%)

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D   S+  G  +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 6   FNVLGEPVDNLGSVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 64

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKK 216
           +F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +
Sbjct: 65  LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISE 124

Query: 217 SVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
           S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 125 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALL 184

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 185 GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 242

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  
Sbjct: 243 ATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIA 301

Query: 392 IGG 394
           I G
Sbjct: 302 ILG 304


>gi|221078703|gb|ACL99426.1| ATP synthase beta subunit [Diospyros ebenum]
          Length = 465

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|170293983|gb|ACB13085.1| ATP synthase beta subunit [Trebouxia sp. CU296e]
          Length = 366

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +   D    I    P  ++       F++GI+V+D+  P   G
Sbjct: 21  LGRIFNVLGEPVDNLGPVETKD-DFPIHRSAPAFVDLDTKLAIFESGIKVVDLLAPYRRG 79

Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD- 212
            +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D 
Sbjct: 80  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDE 138

Query: 213 ---NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
              +  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 139 SNISASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 198

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   + 
Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 256

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E 
Sbjct: 257 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYDCAQNVKQTLQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|149384665|gb|ABR25141.1| ATP synthase beta chain [Cyclopeltis semicordata]
          Length = 426

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|17224715|gb|AAL37079.1| ATP synthase beta subunit [Dioscorea minima]
          Length = 469

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYI--EMKE 199

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 200 SGVINEKXIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 259

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 260 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 317

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 318 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQ 377

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 378 RYKELQDIIAILG 390


>gi|62902867|gb|AAY19348.1| ATP synthase beta subunit [Lacistema aggregatum]
          Length = 479

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---DLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 200

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    VA S         +E P  R    LTA+T+AE+F    + +VLL +D+I RF
Sbjct: 201 SGVINEKNVAESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDVLLFIDNIFRF 260

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 261 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 318

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 319 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQ 378

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 379 RYKELQDIIAILG 391


>gi|312285267|gb|ADQ64375.1| ATP synthase beta subunit [Sinomenium acutum]
          Length = 469

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|148887705|gb|ABR15429.1| ATP synthase beta subunit [Biebersteinia odora]
          Length = 449

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 20/305 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 383

Query: 384 EETRD 388
           +E +D
Sbjct: 384 KELQD 388


>gi|166836598|gb|ABY90531.1| ATP synthase beta chain [Pilularia minuta]
          Length = 391

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRTPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|149798741|gb|ABR32061.1| ATP synthase beta chain [Pteris vittata]
          Length = 426

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE   
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 202 -VREFIEDYLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              E  E  + +  K    K  +V    +E P  R     TA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQKISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLV 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +  
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|4995794|emb|CAB44265.1| H(+)-transporting ATP synthase [Rulingia sp. Chase 2196]
          Length = 488

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L  RI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQGRI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|14718097|gb|AAK72788.1| ATP synthase beta subunit [Knema latericia]
          Length = 490

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|17224725|gb|AAL37084.1| ATP synthase beta subunit [Dioscorea dumetorum]
          Length = 466

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 195

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 196 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLRPGIVGEEHYETAQKVKQTSQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|312285241|gb|ADQ64362.1| ATP synthase beta subunit [Menispermum dauricum]
          Length = 469

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|110349001|gb|ABG73072.1| ATP synthase beta chain [Pilularia globulifera]
          Length = 394

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRTPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|42559060|gb|AAS20216.1| ATP synthase beta subunit [Tricyrtis sp. Waterway s.n.]
          Length = 467

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 84  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 141 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 200

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 201 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 260

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 261 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 318

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 319 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 378

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 379 ELQDIIAILG 388


>gi|224830502|gb|ACN66346.1| ATP synthase beta chain [Chondrodendron tomentosum]
          Length = 445

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 44  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFXTGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 219

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 220 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 279

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 280 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPXTTF 337

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +D
Sbjct: 338 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQD 397

Query: 389 IRLIGG 394
           I  I G
Sbjct: 398 IIAILG 403


>gi|37720943|gb|AAN32474.1| ATP synthase beta subunit [Triantha glutinosa]
          Length = 489

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVDNLGPVXTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|17224784|gb|AAL37113.1| ATP synthase beta subunit [Stichoneuron caudatum]
          Length = 480

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|16943765|emb|CAD10774.1| atp synthase, beta subunit [Lanaria lanata]
          Length = 498

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7688023|emb|CAB89716.1| ATP synthase beta subunit [Liriodendron tulipifera]
          Length = 498

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|5758875|gb|AAD50849.1| ATP synthase beta subunit [Dasypogon bromeliifolius]
          Length = 496

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830576|gb|ACN66383.1| ATP synthase beta chain [Sinomenium acutum]
          Length = 471

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDSSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 207

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 208 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIIAILG 397


>gi|37720949|gb|AAN32477.1| ATP synthase beta subunit [Japonolirion osense]
          Length = 489

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|17224737|gb|AAL37090.1| ATP synthase beta subunit [Dioscorea pentaphylla]
          Length = 477

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL  D+I RF  
Sbjct: 207 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFXDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQAGIVGEEHYETAQKVKQTSQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|17224780|gb|AAL37111.1| ATP synthase beta subunit [Stemona tuberosa]
          Length = 478

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|17224786|gb|AAL37114.1| ATP synthase beta subunit [Croomia japonica]
          Length = 478

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|14717976|gb|AAK72730.1| ATP synthase beta subunit [Burmannia biflora]
          Length = 483

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSACWCGR 104
           K+ D LGQ I +  ++  +        +++          D++       +       GR
Sbjct: 40  KSRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTGSPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|239616625|ref|YP_002939947.1| ATP synthase F1, beta subunit [Kosmotoga olearia TBF 19.5.1]
 gi|239505456|gb|ACR78943.1| ATP synthase F1, beta subunit [Kosmotoga olearia TBF 19.5.1]
          Length = 483

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 167/303 (55%), Gaps = 17/303 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157
            GR+ N LG+PID      +G +  E    + + PP +  Q+ + +  +TGI+VID+  P
Sbjct: 103 LGRMFNLLGEPIDE-----RGPVEAEEFWDIHREPPGVTEQKTDVEILETGIKVIDLLAP 157

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213
              G +IG F G+G+GK+ L+    R+   +   +S+   VGER RE  + ++E      
Sbjct: 158 FNKGGKIGFFGGAGVGKTVLVMELIRNIAIEHKGLSIFAGVGERTREGNDLWLEMQEAGV 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +  + +V    +E P  R    L+A+T+AEYF   +  +VL+ +D+I RF  +  E++  
Sbjct: 218 IGNTALVFGQMNEPPGARFRVALSAITMAEYFRDVQKKDVLVFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  S L
Sbjct: 278 LGRMPSAVGYQPTLATEMGQLQERI--TSTKNGSITSVQAIYVPADDFTDPAPATTFSHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D  + L+RS+AE+G YP VDPL S S+ LA +    +   +   +  ++ R+++ +DI  
Sbjct: 336 DATVNLSRSIAEQGLYPAVDPLDSSSKNLAPEIVGMEHYVVARRVQEVLQRYKDLQDIIA 395

Query: 392 IGG 394
           I G
Sbjct: 396 ILG 398


>gi|210623311|ref|ZP_03293728.1| hypothetical protein CLOHIR_01678 [Clostridium hiranonis DSM 13275]
 gi|210153712|gb|EEA84718.1| hypothetical protein CLOHIR_01678 [Clostridium hiranonis DSM 13275]
          Length = 497

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 160/331 (48%), Gaps = 13/331 (3%)

Query: 65  INLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGK 121
           +NL+   +  V +G+E  I   D+V   G+    P      GRV++ LG PIDG  S+ K
Sbjct: 64  LNLEKETVGAVLLGDEEGIKEDDIVKRTGKIVEVPVGDALIGRVVDPLGNPIDGRGSI-K 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-M 180
            D +  I ++ P  M+R+ V +  +TGI+ ID   P+  GQR  V      GK+++L+  
Sbjct: 123 TDKTRPIEAEAPGIMDRRSVYQPLQTGIKAIDAMVPIGKGQRELVIGDKQTGKTSILTDT 182

Query: 181 FARSDCFDKVIISL-VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
                  D + I + +G++   V + +    DY    +  ++VV AT+ ES  L+ +AP 
Sbjct: 183 ILNQKGKDIICIYVAIGQKKSTVAQLVSSLRDY--GAMDYTIVVSATASESAPLQYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + E F  +G +VL+I D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGTAMGEEFMYQGKDVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     + +  I  +V SI DG I L   L   G  P VDP 
Sbjct: 301 SAKLSDELGGGSMTAIPVIETQEGDVSSYIPTNVISITDGQIYLQPELFHSGIRPAVDPG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A     KKL S L     ++ E
Sbjct: 361 ISVSRVGGAAQIKSMKKLASELKLAYSQYRE 391


>gi|149384577|gb|ABR25111.1| ATP synthase beta chain [Lastreopsis effusa]
          Length = 426

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVRSSVTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHHDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|159227388|emb|CAJ80485.1| ATP synthase beta subunit [Physalis sp. P139]
 gi|159232246|emb|CAJ80638.1| ATP synthase beta subunit [Physalis acutifolia]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|155029351|dbj|BAF75559.1| ATP synthase beta subunit [Micrandropsis scleroxylon]
          Length = 489

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 154/307 (50%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLNTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G + G+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++    
Sbjct: 153 PYRRGGKTGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 212 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQR 389

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 390 YKELQDI 396


>gi|323486833|ref|ZP_08092151.1| hypothetical protein HMPREF9474_03902 [Clostridium symbiosum
           WAL-14163]
 gi|323690851|ref|ZP_08105145.1| V-type sodium ATPase [Clostridium symbiosum WAL-14673]
 gi|323399846|gb|EGA92226.1| hypothetical protein HMPREF9474_03902 [Clostridium symbiosum
           WAL-14163]
 gi|323505070|gb|EGB20838.1| V-type sodium ATPase [Clostridium symbiosum WAL-14673]
          Length = 460

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 154/300 (51%), Gaps = 29/300 (9%)

Query: 98  SACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           S    GR  N +G+PIDG   LG   G++ +++  K    ++R+      +TGI  ID  
Sbjct: 82  SEEMLGRTFNGIGQPIDG---LGPVPGNVRLDVNGKPLNPVSREYPRNYIRTGISAIDGL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFAR--------SDCFDKVIISL-----VGERGREV 202
           T L  GQ++ +F+G+G+    L +   +        S+ F  V  ++     VG+  R  
Sbjct: 139 TTLIRGQKLPIFSGNGLPHDQLAAQIVQQASLGDDSSEKFAIVFAAMGVKYEVGDYFR-- 196

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITR 261
           R F E  + D++   V  +  +++  + R + P  A+T AEY +  K  ++L+IL  +T 
Sbjct: 197 RTFEESGVSDHV---VTFINLANDPVMERLITPKIALTTAEYLAFEKHMHILVILTDMTS 253

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA ++RE++++ GE+P  +GYP  ++SEL  + ER G      G++T +  + +  D+  
Sbjct: 254 FAEAMREVSSSKGEIPSRKGYPGYLYSELAAIYERAGIVAGINGSVTQIPILTMPNDDIT 313

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSL 376
            PI D    I +G IVL+R L  +  YPPV  L S+SRL      D    AD + + + L
Sbjct: 314 HPIPDLTGYITEGQIVLDRGLQGQSIYPPVSVLPSLSRLMKDGIGDGFTRADHQDVANQL 373


>gi|159232254|emb|CAJ80642.1| ATP synthase beta subunit [Nicotiana sylvestris]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|159228826|emb|CAJ80610.1| ATP synthase beta subunit [Solanum macrocarpon]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|159227634|emb|CAJ80608.1| ATP synthase beta subunit [Schwenckia americana]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|149798723|gb|ABR32052.1| ATP synthase beta chain [Platyzoma microphyllum]
          Length = 426

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQKISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|56236592|gb|AAV84663.1| ATP synthase beta subunit [Taxodium distichum]
          Length = 380

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 150/294 (51%), Gaps = 21/294 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D    LG  D L+   + +  PA  +       F+TG
Sbjct: 81  GPLSVPVGETTLGRIFNVLGEPVD---DLGPVDALTRSPIHRSAPAFTQLDTRFSIFETG 137

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 138 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 196

Query: 205 FIEDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++          N+ KS V  V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 197 LYKEMKESGVINEQNISKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 257 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E
Sbjct: 315 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEE 368


>gi|12004121|gb|AAG43900.1|AF213769_1 ATP synthase beta subunit [Cortusa turkestanica]
          Length = 487

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|169142798|ref|YP_001687223.1| ATP synthase CF1 beta subunit [Aneura mirabilis]
 gi|190358252|sp|B0YPN7|ATPB_ANEMR RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|153973824|gb|ABS54484.1| ATP synthase CF1 beta subunit [Aneura mirabilis]
          Length = 492

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 22/315 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+ +D    +  G L+  I    P  +        F+TGI+V+D+  P  
Sbjct: 103 ATLGRIFNVLGEAVDNLGPVDAG-LTSPIHRAAPSFIQLDTKLSIFETGIKVVDLLVPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNIAESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 399 LQDIIAI----PGLD 409


>gi|75328432|sp|Q85V29|ATPB_OTHSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351927|emb|CAD48411.1| ATP synthase beta subunit [Othocallis siberica]
          Length = 495

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|55056888|emb|CAF21945.1| ATP synthase beta subunit [Welwitschia mirabilis]
          Length = 449

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + D +  I    P           F+TGI+V+D+  P
Sbjct: 77  ATLGRIFNVLGEPVD---NLGPVETDKTSPIHRSAPTFPELDTNLAIFETGIKVVDLLAP 133

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 134 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKQSGV 193

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     +A+ +AEYF      +VLL +D+I RF  +
Sbjct: 194 INEKNITESKVALVYGQMNEPPGARMRVGFSALAMAEYFRDVNKQDVLLFIDNIFRFVQA 253

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             EI+   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP  
Sbjct: 254 GSEISALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSVQAVYVPADDLTDPAP 311

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 312 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQGVKQTLQRYK 371

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 372 ELQDIITILG 381


>gi|114557|sp|P26530|ATPB_NICRU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11764|emb|CAA43611.1| ATPase subunit beta [Nicotiana rustica]
          Length = 498

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 178/370 (48%), Gaps = 31/370 (8%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           +V QG+  D++GQ I +  ++        V    +   E ++ G  V   G    +    
Sbjct: 47  LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPISVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG  +D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGAAVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|3913118|sp|O47037|ATPB_PICAB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|2764568|emb|CAA04458.1| H+-ATP synthase subunit B [Picea abies]
          Length = 488

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P           F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRSAPAFTELDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VL  +D+I RF  
Sbjct: 219 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLSFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 337 PATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 395

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI  I    PG+D
Sbjct: 396 YKELQDIIAI----PGLD 409


>gi|210621993|ref|ZP_03292936.1| hypothetical protein CLOHIR_00882 [Clostridium hiranonis DSM 13275]
 gi|210154438|gb|EEA85444.1| hypothetical protein CLOHIR_00882 [Clostridium hiranonis DSM 13275]
          Length = 464

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 146/280 (52%), Gaps = 11/280 (3%)

Query: 93  FRISPSACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
             ++ S    GRV + +G+P DG  D + +  L +  +   P A  R    +  +TG+  
Sbjct: 77  MELAVSEEMLGRVFDGMGRPKDGGPDIIPEMKLDINGLPMNPAA--RDYPSEFIQTGVSA 134

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205
           ID    L  GQ++ +F+GSG+  + L S  AR      S+    V+ + +G    E   F
Sbjct: 135 IDGLNTLVRGQKLPIFSGSGLPHAELASQIARQAQVLNSESNFAVVFAAMGITYEEADYF 194

Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263
           + D+     + ++V+ +  +++  + R   P  A+T AEY +  K  +VL+IL  IT +A
Sbjct: 195 VSDFKRTGAIDRTVLFMNLANDPAVERISTPRMALTAAEYLAFEKHMHVLVILTDITNYA 254

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++RE++    E+P  RGYP  ++++L  + ER G     +G+IT +  + +  D+   P
Sbjct: 255 EALREVSAARKEVPGRRGYPGYLYTDLATMYERAGRKMGCEGSITMIPILTMPEDDKTHP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           I D    I +G I+L+R L  +G  PP++ L S+SRL DK
Sbjct: 315 IPDLTGYITEGQIILSRELYRKGVTPPINVLPSLSRLKDK 354


>gi|114107053|ref|YP_740209.1| ATP synthase CF1 beta subunit [Liriodendron tulipifera]
 gi|125987796|sp|Q9MU43|ATPB_LIRTU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|113201001|gb|ABI32516.1| ATP synthase CF1 beta subunit [Liriodendron tulipifera]
          Length = 498

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708574|emb|CAB90096.1| ATP synthase beta subunit [Rhamnus cathartica]
          Length = 488

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GTTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   
Sbjct: 214 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|7708327|emb|CAB89910.1| ATP synthase beta subunit [Heisteria parvifolia]
          Length = 486

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R     TA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGXTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|55056884|emb|CAF21943.1| ATP synthase beta subunit [Persea americana]
          Length = 466

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 208

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 209 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 268

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 269 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 326

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 327 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 386

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 387 RYKELQDIIAILG 399


>gi|37720951|gb|AAN32478.1| ATP synthase beta subunit [Stemona tuberosa]
          Length = 482

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|7708686|emb|CAB90021.1| ATP synthase beta subunit [Tricyrtis latifolia]
          Length = 490

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|52082899|gb|AAU26029.1| ATPase beta subunit [Peperomia sp. MAJ-2004]
          Length = 479

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 202

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +     R+
Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSSMLQPRIVGEKHYETAQRVKQTSQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|15723719|gb|AAL05075.1| ATP synthase beta subunit [Trichodiadema barbatum]
          Length = 472

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 155/310 (50%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
               GR+ N LG+P+D    +     S   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 90  GATLGRIFNVLGEPVDNLXPVDTRTTSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAP 147

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G      RE  + Y+       
Sbjct: 148 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVXERTREGNDLYMEMKESGV 207

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 208 ITEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 267

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 268 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 325

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 326 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 385

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 386 ELQDIIAILG 395


>gi|159232308|emb|CAJ80669.1| ATP synthase beta subunit [Cestrum parqui]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|159232296|emb|CAJ80663.1| ATP synthase beta subunit [Exodeconus miersii]
 gi|159232298|emb|CAJ80664.1| ATP synthase beta subunit [Exodeconus miersii]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|42559036|gb|AAS20204.1| ATP synthase beta subunit [Doryanthes palmeri]
          Length = 477

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|8517669|emb|CAB94385.1| ATP synthase beta subunit [Tsuga canadensis]
          Length = 468

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P  
Sbjct: 81  LGRIFNVLGEPVD---NLGPVYARTTSPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 137

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 138 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 197

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 198 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 257

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 258 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 315

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   V +R LA +G YP VDPL S S +  + W   E+  ++   +   + R++E
Sbjct: 316 TFAHSDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRYKE 374

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 375 LQDIIAI----PGLD 385


>gi|241912916|gb|ACS72136.1| AtpB [Stenoptera ecuadorana]
          Length = 489

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           KN D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KNRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  P     
Sbjct: 102 IFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRAG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 396

Query: 390 RLIGG 394
             I G
Sbjct: 397 IAILG 401


>gi|37720989|gb|AAN32497.1| ATP synthase beta subunit [Cypripedium passerinum]
          Length = 497

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  +G++  K  ++    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 220 GVINEKNIGES--KVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 277

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 278 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 335

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 336 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 395

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 396 QRYKELQDIIAILG 409


>gi|18077543|emb|CAC88841.1| atpD beta synthase chain [Pseudomonas chlororaphis subsp.
           aureofaciens]
          Length = 258

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 123/222 (55%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIGNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G++VLL +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|150035719|gb|ABR67205.1| ATP synthase beta subunit [Bouteloua curtipendula]
          Length = 330

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 141/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 156 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTNKGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 274 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTM 309


>gi|42559040|gb|AAS20206.1| ATP synthase beta subunit [Carludovica drudei]
          Length = 489

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|89363533|emb|CAJ82100.1| ATP synthase beta chain [Bergenia crassifolia]
          Length = 468

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 159/325 (48%), Gaps = 20/325 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+P+D   +LG  D   +  I    P  +      
Sbjct: 81  DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 137

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 138 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 197

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +  P  R    LTA+T+AEYF    + 
Sbjct: 198 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNXPPGARMRVGLTALTMAEYFRDVNEQ 257

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 258 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 315

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E 
Sbjct: 316 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEH 375

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 376 YETAQRVKQTLQRYKELQDIIAILG 400


>gi|224830540|gb|ACN66365.1| ATP synthase beta chain [Hypserpa decumbens]
          Length = 468

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTQLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFWGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|159232294|emb|CAJ80662.1| ATP synthase beta subunit [Fabiana imbricata]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLXIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|15705384|gb|AAL05620.1| AtpB [Carludovica palmata]
          Length = 487

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|52788857|gb|AAU87398.1| ATP synthase beta chain [Pilularia globulifera]
          Length = 383

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRTPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|52082889|gb|AAU26025.1| ATPase beta subunit [Pseudowintera axillaris]
          Length = 400

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|7708654|emb|CAB90002.1| ATP synthase beta subunit [Chorigyne pendula]
          Length = 490

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|52788850|gb|AAU87395.1| ATP synthase beta chain [Loxsomopsis pearcei]
          Length = 383

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 28/315 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVID 123

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNLSESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALSGRMPSAVGYQPTLATEMGSPQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 PQDIIAI----PGLD 311


>gi|306773434|emb|CBJ55293.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           imrayana]
          Length = 383

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPIESSTTFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 302 QDIIAILG 309


>gi|294673901|ref|YP_003574517.1| ATP synthase F1 subunit beta [Prevotella ruminicola 23]
 gi|294471716|gb|ADE81105.1| ATP synthase F1, beta subunit [Prevotella ruminicola 23]
          Length = 508

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 159/332 (47%), Gaps = 45/332 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G+PIDG   L   + +  I  + P        ++   TGI+VID+  P   G 
Sbjct: 95  GRMLNVIGQPIDGMKQLDM-EGAYPIHREAPTFEELSTKKEILATGIKVIDLLEPYMKGG 153

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++    + F   + + VGER RE    +RE IE  +   
Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGFS--VFAGVGERTREGNDLIREMIESGVIRY 211

Query: 211 -------------------GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF---- 245
                               + LKKS   +V    +E P  R    L+ +T+AE F    
Sbjct: 212 GEKFREAMDQGKWDLSLVDPEELKKSQATLVYGQMNEPPGARASVALSGLTVAEGFRDGG 271

Query: 246 --SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ SE+  + ERI  +  +
Sbjct: 272 GKDGGAADILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGSMQERI--TSTK 329

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D 
Sbjct: 330 TGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLDRKIAELGIYPAVDPLGSTSRILDP 389

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
                        +  ++ R++E +DI  I G
Sbjct: 390 LIVGKAHYDCAQRVKEILQRYKELQDIIAILG 421


>gi|122051531|gb|ABM65868.1| ATP synthase beta chain [Grammitis aff. holttumii Ranker & Klimas
           2175]
          Length = 415

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 67  LGRIFNVLGEPVDNLGPVQSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 124

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 125 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 184

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 185 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 244

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 245 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 302

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 303 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 361

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 362 QDIIAILG 369


>gi|42559054|gb|AAS20213.1| ATP synthase beta subunit [Prosartes trachycarpa]
          Length = 486

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|42559066|gb|AAS20219.1| ATP synthase beta subunit [Petermannia cirrosa]
          Length = 489

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEKNIADS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|14717942|gb|AAK72713.1| ATP synthase beta subunit [Aristea glauca]
          Length = 483

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 98  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 154

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 215 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 332

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 392

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 393 ELQDIIAILG 402


>gi|224830550|gb|ACN66370.1| ATP synthase beta chain [Menispermum dauricum]
          Length = 442

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDSSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 207

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 208 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIIAILG 397


>gi|7708660|emb|CAB89992.1| ATP synthase beta subunit [Stemona japonica]
          Length = 497

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 104 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 221 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 280

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 338

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 398

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 399 ELQDIIAILG 408


>gi|7708462|emb|CAB89922.1| ATP synthase beta subunit [Kibara coriacea]
          Length = 491

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 216

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 217 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 276

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 334

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 335 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 394

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 395 RYKELQDIIAILG 407


>gi|290995759|ref|XP_002680450.1| mitochondrial F-1-ATPase subunit [Naegleria gruberi]
 gi|284094071|gb|EFC47706.1| mitochondrial F-1-ATPase subunit [Naegleria gruberi]
          Length = 601

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 16/270 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PID    +   +    I    P    +   ++   TGI++ID+  P   G 
Sbjct: 199 GRVLNVLGEPIDERGPVNAKN-RYSIHRDAPVLSEQTTQDEILVTGIKIIDVLIPYPKGG 257

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A+      V   +  ER RE  + + + +   +    
Sbjct: 258 KIGLFGGAGVGKTVVIMELINNIAKKHGGFSVFGGVG-ERTREGTDLLLEMIQSRVIVVD 316

Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270
               K+ +V    +E P  R     TA++IAEYF   +G +VLL +D+I RF  +  E++
Sbjct: 317 GEGSKASLVYGQMNEPPGARARVGQTALSIAEYFRDEEGQDVLLFIDNIFRFTQANSEVS 376

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  +
Sbjct: 377 ALLGRIPSAVGYQPNLSTDIGELQERI--TSTKKGSITSVQAIYVPADDITDPSPATTFA 434

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            LD   VL+R +AE+G YP VD L S+SRL
Sbjct: 435 HLDATTVLSRQIAEQGMYPAVDALESMSRL 464


>gi|187931018|ref|YP_001891002.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|226739888|sp|B2SEX9|ATPA_FRATM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|187711927|gb|ACD30224.1| ATP synthase, F1 sector, subunit alpha [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 513

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLNDVVA-GEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVAT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +        ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++ D +
Sbjct: 204 TIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYDDL 263

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGN 306
           T+ A + R+I+      P    YP  VF    RLLER              G  + + G+
Sbjct: 264 TKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKTGS 323

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A +
Sbjct: 324 LTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAAQT 383

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KKL   +   + ++ E
Sbjct: 384 KIIKKLGGGIRLALAQYRE 402


>gi|159227246|emb|CAJ80414.1| ATP synthase beta subunit [Withania somnifera]
 gi|159227248|emb|CAJ80415.1| ATP synthase beta subunit [Withania sp. W011]
 gi|159227250|emb|CAJ80416.1| ATP synthase beta subunit [Withania sp. W010]
 gi|159227252|emb|CAJ80417.1| ATP synthase beta subunit [Withania sp. W009]
 gi|159227254|emb|CAJ80418.1| ATP synthase beta subunit [Withania somnifera]
 gi|159227256|emb|CAJ80419.1| ATP synthase beta subunit [Withania frutescens]
 gi|159227258|emb|CAJ80420.1| ATP synthase beta subunit [Vassobia breviflora]
 gi|159227370|emb|CAJ80476.1| ATP synthase beta subunit [Physalis sp. P149]
 gi|159227372|emb|CAJ80477.1| ATP synthase beta subunit [Physalis sp. P148]
 gi|159227376|emb|CAJ80479.1| ATP synthase beta subunit [Physalis sp. P146]
 gi|159227378|emb|CAJ80480.1| ATP synthase beta subunit [Physalis sp. P145]
 gi|159227382|emb|CAJ80482.1| ATP synthase beta subunit [Physalis sp. P142]
 gi|159227390|emb|CAJ80486.1| ATP synthase beta subunit [Physalis sp. P138]
 gi|159227392|emb|CAJ80487.1| ATP synthase beta subunit [Physalis sp. P137]
 gi|159227396|emb|CAJ80489.1| ATP synthase beta subunit [Physalis sp. P135]
 gi|159227410|emb|CAJ80496.1| ATP synthase beta subunit [Physalis sp. P127]
 gi|159227416|emb|CAJ80499.1| ATP synthase beta subunit [Physalis sp. P123]
 gi|159227424|emb|CAJ80503.1| ATP synthase beta subunit [Physalis sp. P118]
 gi|159227426|emb|CAJ80504.1| ATP synthase beta subunit [Physalis sp. P116]
 gi|159227436|emb|CAJ80509.1| ATP synthase beta subunit [Physalis philadelphica var. immaculata]
 gi|159227444|emb|CAJ80513.1| ATP synthase beta subunit [Physalis viscosa]
 gi|159227448|emb|CAJ80515.1| ATP synthase beta subunit [Physalis sp. P100]
 gi|159227450|emb|CAJ80516.1| ATP synthase beta subunit [Physalis sp. P099]
 gi|159227452|emb|CAJ80517.1| ATP synthase beta subunit [Physalis sp. P098]
 gi|159227454|emb|CAJ80518.1| ATP synthase beta subunit [Physalis sp. P097]
 gi|159227456|emb|CAJ80519.1| ATP synthase beta subunit [Physalis sp. P096]
 gi|159227458|emb|CAJ80520.1| ATP synthase beta subunit [Physalis sp. P095]
 gi|159227460|emb|CAJ80521.1| ATP synthase beta subunit [Physalis sp. P094]
 gi|159227462|emb|CAJ80522.1| ATP synthase beta subunit [Physalis sp. P092]
 gi|159227464|emb|CAJ80523.1| ATP synthase beta subunit [Physalis sp. P090]
 gi|159227466|emb|CAJ80524.1| ATP synthase beta subunit [Physalis sp. P089]
 gi|159227468|emb|CAJ80525.1| ATP synthase beta subunit [Physalis sp. P088]
 gi|159227470|emb|CAJ80526.1| ATP synthase beta subunit [Physalis sp. P087]
 gi|159227472|emb|CAJ80527.1| ATP synthase beta subunit [Physalis sp. P086]
 gi|159227474|emb|CAJ80528.1| ATP synthase beta subunit [Physalis sp. P085]
 gi|159227476|emb|CAJ80529.1| ATP synthase beta subunit [Physalis sp. P084]
 gi|159227478|emb|CAJ80530.1| ATP synthase beta subunit [Physalis sp. P083]
 gi|159227480|emb|CAJ80531.1| ATP synthase beta subunit [Physalis sp. P082]
 gi|159227482|emb|CAJ80532.1| ATP synthase beta subunit [Physalis sp. P081]
 gi|159227484|emb|CAJ80533.1| ATP synthase beta subunit [Physalis sp. P080]
 gi|159227486|emb|CAJ80534.1| ATP synthase beta subunit [Physalis sp. P079]
 gi|159227492|emb|CAJ80537.1| ATP synthase beta subunit [Physalis sp. P076]
 gi|159227494|emb|CAJ80538.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227496|emb|CAJ80539.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227498|emb|CAJ80540.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227500|emb|CAJ80541.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227502|emb|CAJ80542.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227504|emb|CAJ80543.1| ATP synthase beta subunit [Physalis pruinosa]
 gi|159227506|emb|CAJ80544.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227508|emb|CAJ80545.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227512|emb|CAJ80547.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227514|emb|CAJ80548.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227516|emb|CAJ80549.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227518|emb|CAJ80550.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227520|emb|CAJ80551.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227522|emb|CAJ80552.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227524|emb|CAJ80553.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227526|emb|CAJ80554.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227528|emb|CAJ80555.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227530|emb|CAJ80556.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227534|emb|CAJ80558.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227536|emb|CAJ80559.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227538|emb|CAJ80560.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159227540|emb|CAJ80561.1| ATP synthase beta subunit [Physalis peruviana]
 gi|159227542|emb|CAJ80562.1| ATP synthase beta subunit [Physalis peruviana]
 gi|159227544|emb|CAJ80563.1| ATP synthase beta subunit [Physalis peruviana]
 gi|159227546|emb|CAJ80564.1| ATP synthase beta subunit [Physalis peruviana]
 gi|159227548|emb|CAJ80565.1| ATP synthase beta subunit [Physalis peruviana]
 gi|159227550|emb|CAJ80566.1| ATP synthase beta subunit [Physalis minima]
 gi|159227552|emb|CAJ80567.1| ATP synthase beta subunit [Physalis minima]
 gi|159227554|emb|CAJ80568.1| ATP synthase beta subunit [Physalis fuscomaculata]
 gi|159227556|emb|CAJ80569.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227558|emb|CAJ80570.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227560|emb|CAJ80571.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159227562|emb|CAJ80572.1| ATP synthase beta subunit [Physalis curassavica]
 gi|159227564|emb|CAJ80573.1| ATP synthase beta subunit [Physalis curassavica]
 gi|159227568|emb|CAJ80575.1| ATP synthase beta subunit [Physalis coztomatl]
 gi|159227570|emb|CAJ80576.1| ATP synthase beta subunit [Physalis coztomatl]
 gi|159227572|emb|CAJ80577.1| ATP synthase beta subunit [Physalis angulata]
 gi|159227574|emb|CAJ80578.1| ATP synthase beta subunit [Physalis angulata]
 gi|159227576|emb|CAJ80579.1| ATP synthase beta subunit [Physalis alkekengi]
 gi|159227578|emb|CAJ80580.1| ATP synthase beta subunit [Physalis alkekengi]
 gi|159227580|emb|CAJ80581.1| ATP synthase beta subunit [Physalis alkekengi]
 gi|159227582|emb|CAJ80582.1| ATP synthase beta subunit [Physalis alkekengi]
 gi|159227584|emb|CAJ80583.1| ATP synthase beta subunit [Physalis alkekengi var. franchetii]
 gi|159227586|emb|CAJ80584.1| ATP synthase beta subunit [Physalis alkekengi var. franchetii]
 gi|159227590|emb|CAJ80586.1| ATP synthase beta subunit [Physalis aequata]
 gi|159227592|emb|CAJ80587.1| ATP synthase beta subunit [Physalis acutifolia]
 gi|159227594|emb|CAJ80588.1| ATP synthase beta subunit [Physalis sp. P0]
 gi|159227622|emb|CAJ80602.1| ATP synthase beta subunit [Withania coagulans]
 gi|159227626|emb|CAJ80604.1| ATP synthase beta subunit [Vassobia breviflora]
 gi|159227628|emb|CAJ80605.1| ATP synthase beta subunit [Vassobia breviflora]
 gi|159227630|emb|CAJ80606.1| ATP synthase beta subunit [Tubocapsicum anomalum]
 gi|159227632|emb|CAJ80607.1| ATP synthase beta subunit [Tubocapsicum anomalum]
 gi|159232198|emb|CAJ80614.1| ATP synthase beta subunit [Salpichroa origanifolia]
 gi|159232206|emb|CAJ80618.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159232208|emb|CAJ80619.1| ATP synthase beta subunit [Physalis peruviana]
 gi|159232210|emb|CAJ80620.1| ATP synthase beta subunit [Physalis viscosa]
 gi|159232212|emb|CAJ80621.1| ATP synthase beta subunit [Physalis pubescens]
 gi|159232214|emb|CAJ80622.1| ATP synthase beta subunit [Physalis pruinosa]
 gi|159232216|emb|CAJ80623.1| ATP synthase beta subunit [Physalis philadelphica]
 gi|159232220|emb|CAJ80625.1| ATP synthase beta subunit [Physalis minima]
 gi|159232222|emb|CAJ80626.1| ATP synthase beta subunit [Physalis mexicana]
 gi|159232224|emb|CAJ80627.1| ATP synthase beta subunit [Physalis mendocina]
 gi|159232226|emb|CAJ80628.1| ATP synthase beta subunit [Physalis lanceifolia]
 gi|159232228|emb|CAJ80629.1| ATP synthase beta subunit [Physalis ixocarpa]
 gi|159232230|emb|CAJ80630.1| ATP synthase beta subunit [Physalis fuscomaculata]
 gi|159232232|emb|CAJ80631.1| ATP synthase beta subunit [Physalis curassavica]
 gi|159232234|emb|CAJ80632.1| ATP synthase beta subunit [Physalis curassavica]
 gi|159232236|emb|CAJ80633.1| ATP synthase beta subunit [Physalis crassifolia]
 gi|159232238|emb|CAJ80634.1| ATP synthase beta subunit [Physalis coztomatl]
 gi|159232240|emb|CAJ80635.1| ATP synthase beta subunit [Physalis angulata]
 gi|159232242|emb|CAJ80636.1| ATP synthase beta subunit [Physalis alkekengi var. alkekengi]
 gi|159232244|emb|CAJ80637.1| ATP synthase beta subunit [Physalis alkekengi]
 gi|159232248|emb|CAJ80639.1| ATP synthase beta subunit [Physalis acutifolia]
 gi|159232266|emb|CAJ80648.1| ATP synthase beta subunit [Nicotiana glauca]
 gi|159232272|emb|CAJ80651.1| ATP synthase beta subunit [Margaranthus solanaceus]
 gi|159232280|emb|CAJ80655.1| ATP synthase beta subunit [Lycianthes biflora]
 gi|159232286|emb|CAJ80658.1| ATP synthase beta subunit [Iochroma australe]
 gi|159232300|emb|CAJ80665.1| ATP synthase beta subunit [Dunalia fasciculata]
 gi|159232302|emb|CAJ80666.1| ATP synthase beta subunit [Datura inoxia]
 gi|159232310|emb|CAJ80670.1| ATP synthase beta subunit [Capsicum baccatum]
 gi|159232312|emb|CAJ80671.1| ATP synthase beta subunit [Capsicum annuum]
 gi|159232316|emb|CAJ80673.1| ATP synthase beta subunit [Brugmansia aurea]
 gi|160430733|gb|ABX44294.1| ATP synthase subunit beta [Physalis fuscomaculata]
          Length = 336

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|14718092|gb|AAK72786.1| ATP synthase beta subunit [Japonolirion osense]
          Length = 472

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|299143407|ref|ZP_07036487.1| V-type sodium ATPase, B subunit [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298517892|gb|EFI41631.1| V-type sodium ATPase, B subunit [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 457

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 162/315 (51%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+VI I+ D  +V I     G  +    + F      +  S    GRV + LG+PID D 
Sbjct: 42  GRVIEIDGDKAMVQIFEGSSGINLQETSVRFLGRPLELGVSPDMIGRVFDGLGQPID-DG 100

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 101 PRIIPNAKIDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR      S+    V+ + +G    E + FI+D+     + ++V+ +  +D+  I 
Sbjct: 161 AAQIARQAQVRGSNEKFAVVFTAMGITFEEAQFFIDDFKETGAIDRAVLFMNLADDPAIE 220

Query: 231 RKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + G +VL+I+  +T +A ++REI+    E+P  RGYP  ++++
Sbjct: 221 RLATPKMALTCAEYLAFELGMHVLVIMTDMTNYAEALREISAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  + ER G  +   G+IT +  + +  D+   PI D    I +G I+L+R L ++G  P
Sbjct: 281 LAGIYERAGRIKGRNGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRQLYKQGLEP 340

Query: 350 PVDPLASVSRLADKA 364
           P++ + S+SRL DK 
Sbjct: 341 PINAIPSLSRLKDKG 355


>gi|12004123|gb|AAG43901.1|AF213770_1 ATP synthase beta subunit [Coris monspeliensis]
          Length = 487

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|7708560|emb|CAB89960.1| ATP synthase beta subunit [Prostanthera ovalifolia]
          Length = 492

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P 
Sbjct: 103 GSTLGRIFNVLGEPVDNLVPV-DARTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 161

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 162 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 221

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 222 NEGNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 281

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 282 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 339

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E
Sbjct: 340 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 399

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 400 LQDIIAILG 408


>gi|5758902|gb|AAD50876.1| ATP synthase beta subunit [Orchidantha siamensis]
          Length = 496

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +      + F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIELDTKLEIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDNL 214
              G +IG+F G+G+GK+ L+     +         +   VGER RE  +  ++     +
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNVGKAHGGVSVFGGVGERTREGNDLYKEMKESGV 221

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I R   +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRLVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       ++  ++   +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEKHYEIAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIITILG 409


>gi|332884310|gb|EGK04578.1| ATP synthase subunit beta [Dysgonomonas mossii DSM 22836]
          Length = 504

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 160/331 (48%), Gaps = 45/331 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161
           GR++N +G  IDG   L   +     + + PP     Q   +   TGI+V+D+  P   G
Sbjct: 93  GRLMNVVGNSIDGMKPLS--NQGGAPIHREPPKFEELQTTREVLFTGIKVVDLLAPYAKG 150

Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL-- 210
            ++G+F G+G+GK+ L+     ++  + + +   + + VGER RE    +RE IE  +  
Sbjct: 151 GKVGLFGGAGVGKTVLIMELINNIAKKHNGYS--VFAGVGERTREGNDLLREMIESNVIR 208

Query: 211 -GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-SS 247
            G+  KKS+                     +V    +E P  R    L+ +TIAE F  S
Sbjct: 209 YGEEFKKSMEEGNWDLSKVDYDELQKSQISLVFGQMNEPPGARADVALSGLTIAESFRDS 268

Query: 248 KGD---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           K +   ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 269 KAEGPKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTQN 326

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  S LD   VL+R + E G YP VDPL S SR  D  
Sbjct: 327 GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITEMGIYPAVDPLGSSSRSLDPN 386

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
               E       +  ++ R +E +DI  I G
Sbjct: 387 VVGQEHYDTAQRVKQILQRNKELQDIIAILG 417


>gi|332981215|ref|YP_004462656.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Mahella australiensis 50-1 BON]
 gi|332698893|gb|AEE95834.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Mahella australiensis 50-1 BON]
          Length = 464

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 141/271 (52%), Gaps = 9/271 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV + LG+P D D      D  M+I  +      R    +  +TGI  ID    L  G
Sbjct: 86  LGRVFDGLGRPND-DGPKIIPDKRMDINGEPMNPTARDYPSEFIQTGISAIDGLNTLVRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           Q++ +F+GSG+  + L +  AR       +    V+ + +G    E   FI D+     +
Sbjct: 145 QKLPIFSGSGLPHAQLAAQIARQAKVLEGESRFAVVFAAIGITFEEANFFISDFQRTGAI 204

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
           +++ V +  +++  I R   P TA+T AEY +   G +VL+I+  +T +A ++RE++   
Sbjct: 205 ERACVFINLANDPAIERISTPRTALTAAEYLAFDLGMHVLVIMTDMTNYAEALREVSAAR 264

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  RGYP  ++++L  + ER G  + ++G+IT +  + +  D+   PI D    I +
Sbjct: 265 KEVPGRRGYPGYLYTDLASMYERAGRIKGKEGSITLIPILTMPEDDITHPIPDLTGYITE 324

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G I+L R L  +G  PP+D L S+SRL DK 
Sbjct: 325 GQIILGRELFRKGVTPPIDVLPSLSRLKDKG 355


>gi|52082887|gb|AAU26024.1| ATPase beta subunit [Takhtajania perrieri]
          Length = 472

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 196 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|7708638|emb|CAB89989.1| ATP synthase beta subunit [Sarracenia flava]
          Length = 482

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               G++ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGQIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|5031149|gb|AAD38085.1|AF093424_1 ATP synthase beta subunit [Tasmannia insipida]
 gi|33327775|gb|AAQ09251.1| ATP synthase beta subunit [Tasmannia lanceolata]
          Length = 494

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKXSG 216

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 394

Query: 384 EETRDI 389
           +E +DI
Sbjct: 395 KELQDI 400


>gi|5031151|gb|AAD38086.1|AF093425_1 ATP synthase beta subunit [Drimys winteri]
          Length = 494

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 394

Query: 384 EETRDI 389
           +E +DI
Sbjct: 395 KELQDI 400


>gi|5758915|gb|AAD50889.1| ATP synthase beta subunit [Stichoneuron caudatum]
          Length = 496

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|110915584|gb|ABH02580.1| ATP synthase beta subunit [Arctagrostis latifolia]
          Length = 475

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 198 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L  +G YP V PL S S +       +E  +    +   + R+
Sbjct: 316 PATTFAHLDATTVLSRGLXSKGIYPAVXPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|114564219|ref|YP_751733.1| F0F1 ATP synthase subunit alpha [Shewanella frigidimarina NCIMB
           400]
 gi|122298941|sp|Q07YM0|ATPA1_SHEFN RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|114335512|gb|ABI72894.1| ATP synthase F1, alpha subunit [Shewanella frigidimarina NCIMB 400]
          Length = 517

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 180/392 (45%), Gaps = 12/392 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
            ++    L Q    +S  L  Q   I +ITS+   +  +S    +G F       SD  G
Sbjct: 12  FEQTFSILQQARRSFSPQL--QPREIGTITSIATGIAKVSGLPGVG-FEEILKFPSDIFG 68

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
               ++ D +    +G    +  GD V   G     P      GR+IN +G+P+DG   L
Sbjct: 69  IAFNVDEDEIGAVLLGDYWHLQAGDEVERCGHLVDVPVGEGLLGRIINPIGEPLDGKGRL 128

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
                 + I    P  MNR  V    +TGI+VID   P+  GQR  +      GK+ +  
Sbjct: 129 -IASARLPIERPSPAIMNRAPVSVPLQTGIKVIDALIPVGLGQRELILGDRQTGKTAIAV 187

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPL 236
            ++  + D     +   +G+R   V + I   +    L+ +VVVV   ++ P L  +AP 
Sbjct: 188 DTILNQRDKNVLCVYCAIGQRASGVAKVIATLHEQGALEYTVVVVTEGNDPPGLAYIAPY 247

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G NVL++ D +T  A + RE++      P    +P  +F    RLLER
Sbjct: 248 AATSIAEYFMQQGRNVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLER 307

Query: 297 ---IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
              + P+    G++TA+  +  +  + +  I  ++ SI DG I L+ SL E G  P +D 
Sbjct: 308 ATHLSPNLG-GGSLTALPIIETEAQDISAYIPTNLISITDGQIYLSPSLFELGVLPAIDV 366

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+  KA  A  + + S+L     +FEE
Sbjct: 367 GKSVSRVGGKAQRAAYRAVASNLKLAYAQFEE 398


>gi|149798725|gb|ABR32053.1| ATP synthase beta chain [Polytaenium cajenense]
          Length = 394

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVTN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|113910940|gb|ABI48202.1| ATPase beta subunit [Nephrolepis biserrata var. furcans]
          Length = 449

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 157/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   E   F+TGI+V+D+  P  
Sbjct: 69  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTELSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+A YF      +VLL +D+I RF  +  
Sbjct: 186 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAGYFRDVNNQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L  RI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLGTEMGSLQGRI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 304 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 362

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 363 LQDIIAILG 371


>gi|312285205|gb|ADQ64344.1| ATP synthase beta subunit [Caryomene grandifolia]
          Length = 469

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GVTLGRIFNVLGEPID---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|159232290|emb|CAJ80660.1| ATP synthase beta subunit [Hyoscyamus niger]
          Length = 330

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 35  GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 91

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 92  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 151

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 152 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 211

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 212 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 269

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 270 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 305


>gi|42559042|gb|AAS20207.1| ATP synthase beta subunit [Alstroemeria aurea]
          Length = 489

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GSTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +    
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTS 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|14718263|gb|AAK72869.1| ATP synthase beta subunit [Viviania marifolia]
          Length = 373

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 32  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 90

Query: 201 E----VREFIEDYLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E     +E  E  + +  K    K  +V    +E P  R    LTA+T+AEYF      N
Sbjct: 91  EGNDLYKEMKESGVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQN 150

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ 
Sbjct: 151 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQ 208

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       DE  
Sbjct: 209 AVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGDEHY 268

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 269 ETAQRVKQTLQRYKELQDIIAILG 292


>gi|224830542|gb|ACN66366.1| ATP synthase beta chain [Hypserpa laurina]
          Length = 482

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTQLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFWGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|167766059|ref|ZP_02438112.1| hypothetical protein CLOSS21_00552 [Clostridium sp. SS2/1]
 gi|167712139|gb|EDS22718.1| hypothetical protein CLOSS21_00552 [Clostridium sp. SS2/1]
 gi|291560010|emb|CBL38810.1| Archaeal/vacuolar-type H+-ATPase subunit B [butyrate-producing
           bacterium SSC/2]
          Length = 461

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 25/354 (7%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGK 111
           +  +G++I +  D   I      E +SL +    L  H     ++P     GR  N +GK
Sbjct: 38  TKKIGRIIELYEDKAVIQVFEGTENMSLDNTRTKLTGHPMEVSLAPD--MLGRTFNGIGK 95

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           PIDG   L   D+  ++       + R+      +TGI  ID  T L  GQ++ +F+G+G
Sbjct: 96  PIDGLGPL-ITDVKRDVNGLPLNPVRRKYPRNYIRTGISAIDGLTTLIRGQKLPIFSGNG 154

Query: 172 IGKSTLLSMFARS----DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV------V 221
           +    L +   +     D  D+    + G  G  V+  + D+     ++S V       +
Sbjct: 155 LPHDQLAAQIVKQASLGDGSDEPFAVVFGAMG--VKHDVADFFQKTFEESGVADHVCMFL 212

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVAR 280
             +++  + R + P  A+T AEY +   + ++L+IL  +T FA ++RE++++ GE+P  +
Sbjct: 213 NLANDPVVERLITPKVALTAAEYLAFDCNMHILVILTDMTSFAEAMREVSSSKGEIPSRK 272

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP  ++SEL  L ER G  E  +G++T +  + +  D+   PI D    I +G IVL+R
Sbjct: 273 GYPGYLYSELATLYERAGIIEGAEGSVTQLPILTMPNDDITHPIPDLTGYITEGQIVLDR 332

Query: 341 SLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +L  +  YPP+  L S+SRL      +     D + L + L     +  E R++
Sbjct: 333 NLNGQSIYPPISVLPSLSRLMKDGIGEGYTREDHQDLANQLFSAYAKVGEARNL 386


>gi|75336630|sp|Q9MU41|ATPB_MAGTR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688025|emb|CAB89718.1| ATP synthase beta subunit [Magnolia tripetala]
          Length = 498

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|316974140|gb|EFV57666.1| ATP synthase F1, beta subunit [Trichinella spiralis]
          Length = 542

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 154/314 (49%), Gaps = 32/314 (10%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSK-------VPPAMNRQRVEKGFKTGIRVIDI 154
            GR++N +G+PID    +         M+K        P  +     ++   TGI+V+D+
Sbjct: 154 LGRIMNVIGEPIDERGPITTTSFVGRTMTKFASIHQDAPEFVEMSVAQEILTTGIKVVDL 213

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFI 206
             P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      E I
Sbjct: 214 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNEMI 272

Query: 207 E----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261
           E    D  GD   K  +V    +E P  R    LT +T+AEYF   +G +VLL       
Sbjct: 273 ETKVIDLKGDT-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLL------- 324

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 325 FTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLT 382

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380
           DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     +    V+  +  ++
Sbjct: 383 DPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNIVGERHYNVARGVQKIL 442

Query: 381 HRFEETRDIRLIGG 394
             ++  +DI  I G
Sbjct: 443 QNYKSLQDIIAILG 456


>gi|12004149|gb|AAG43914.1|AF213783_1 ATP synthase beta subunit [Omphalogramma delavayi]
          Length = 483

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIGGEEHYETGQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           ++ +DI  I G
Sbjct: 399 KKLQDIIAILG 409


>gi|3850928|gb|AAC72156.1| ATP synthase beta subunit [Adenanthos obovatus]
          Length = 490

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +     D   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTXGHXDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6017808|gb|AAF01638.1| ATP synthase beta subunit [Menispermum canadense]
          Length = 490

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 212 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGXMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|5758872|gb|AAD50846.1| ATP synthase beta subunit [Cyclanthus bipartitus]
          Length = 496

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|68139367|gb|AAY86048.1| ATP synthase beta subunit [Hortonia floribunda]
          Length = 456

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 196

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 197 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 256

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 257 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 314

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 315 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 374

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 375 RYKELQDIIAILG 387


>gi|113910852|gb|ABI48158.1| ATPase beta subunit [Fissidens dubius]
          Length = 465

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 86  GRISNVLGEPVD---NLGPVDASXTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 142

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 143 GGKIGLFGGAGVGKTXLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 202

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +V   +D+I RF  +  E
Sbjct: 203 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVPSFIDNIFRFVQAGSE 262

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 263 VSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 320

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R++E 
Sbjct: 321 FAHLDATTVLSRGLAAKGIYPAVDPPDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 379

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 380 QDIIAILG 387


>gi|14718034|gb|AAK72758.1| ATP synthase beta subunit [Drypetes roxburghii]
          Length = 386

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 145/276 (52%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
              G+N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINGENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366


>gi|5758900|gb|AAD50874.1| ATP synthase beta subunit [Musella lasiocarpa]
          Length = 496

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830558|gb|ACN66374.1| ATP synthase beta chain [Parabaena sagittata]
          Length = 489

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDNRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|224830516|gb|ACN66353.1| ATP synthase beta chain [Cocculus balfourii]
          Length = 445

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 196 VINEENIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|149798719|gb|ABR32050.1| ATP synthase beta chain [Pentagramma triangularis]
          Length = 426

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 31/338 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTASTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 332 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|159232282|emb|CAJ80656.1| ATP synthase beta subunit [Jaltomata hunzikeri]
          Length = 332

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 35  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 91

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 92  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 151

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 152 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 211

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 212 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 269

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 270 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 329

Query: 384 EE 385
           +E
Sbjct: 330 KE 331


>gi|110006294|gb|ABG48642.1| ATP synthase subunit B [Euscaphis japonica]
          Length = 468

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 199

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+A+YF    + +VLL +D+I RF
Sbjct: 200 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAKYFRDVNEQDVLLFIDNIFRF 259

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 260 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 317

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 318 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 377

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 378 RYKELQDIIAILG 390


>gi|16943761|emb|CAD10771.1| atp synthase, beta subunit [Orthrosanthus polistachus]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|61968201|gb|AAX57027.1| ATP synthase beta subunit [Amanoa strobilacea]
          Length = 479

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GVTLGRIFNVLGEPVD---DLGPIDTRATYPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 327 PATTFAHLDATTVLSRGLAVKGIYPAVDPLDSTSTMLQPQIVGPEHYETAQRVKQTLQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|42558428|gb|AAS19923.1| ATP synthase beta chain [Xiphopteris conjunctisora]
          Length = 422

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVQSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|6017820|gb|AAF01644.1| ATP synthase beta subunit [Peperomia serpens]
          Length = 478

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKDSG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+ EYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMXEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSSMLQPRIVGEEHYETAQRVKQTSQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|6017800|gb|AAF01634.1| ATP synthase beta subunit [Hamamelis virginiana]
          Length = 490

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG         I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPXXXXXXXXIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|18077549|emb|CAC88844.1| atpD beta synthase chain [Pseudomonas flavescens]
          Length = 258

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 23  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +F  +    N L K  +V    +E P  R    LT +T+AE F  +G +VL  +D+I 
Sbjct: 83  GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIY 142

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  D+ 
Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDL 200

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242


>gi|301500988|ref|YP_003795453.1| ATP synthase CF1 beta subunit [Alveolata sp. CCMP3155]
 gi|300069534|gb|ADJ66641.1| ATP synthase CF1 beta subunit [Chromerida sp. RM11]
          Length = 545

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 160/331 (48%), Gaps = 38/331 (11%)

Query: 100 CWCGRVINALGKPID-----------------GDDSLGKGDLSMEIMSKVP-----PAMN 137
           C  GR+IN LG P D                 G + L      +E+  + P     P + 
Sbjct: 118 CTLGRIINVLGLPTDRLGPVWRFLLEKSDVKEGSNPLQNLSQKLELYERRPIHSTAPTLA 177

Query: 138 RQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
              VE    +TGI+V+D+ TP   G ++G+F G+G+GK+ L+     +       +S+  
Sbjct: 178 DLVVEPSVLETGIKVLDLLTPYRRGGKVGLFGGAGVGKTVLIMELINNIAKFHGGVSVFA 237

Query: 195 -VGERGRE----VREFIEDYLGDN----LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE     +E  E  + D       +  +V    +E P  R    LTA+TI+E+F
Sbjct: 238 GVGERTREGFDLYKEMREAGVIDAQYPPYSQVALVYGQMNEPPGARMRVALTALTISEFF 297

Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
              +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + 
Sbjct: 298 RDERKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGYLQERI--TTTKT 355

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADK 363
           G+IT++ ++ V  D+  DP   +  S LD   VL+R LA +G YP +DPL S S  L  +
Sbjct: 356 GSITSIQAIYVPADDLTDPATATTFSHLDATTVLSRQLAAKGIYPAIDPLESNSTVLQPE 415

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
                      S+  ++ +++E +D+  I G
Sbjct: 416 IVGEAHYDTAQSVRKILQQYKELQDLIAILG 446


>gi|156622735|dbj|BAF76348.1| ATP synthase beta subunit [Magnolia praecocissima]
          Length = 488

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
            E +DI  I G
Sbjct: 391 XELQDIIAILG 401


>gi|145590502|ref|YP_001152504.1| V-type ATP synthase subunit B [Pyrobaculum arsenaticum DSM 13514]
 gi|167016635|sp|A4WHI5|VATB_PYRAR RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|145282270|gb|ABP49852.1| Sodium-transporting two-sector ATPase [Pyrobaculum arsenaticum DSM
           13514]
          Length = 467

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 20/353 (5%)

Query: 61  QVIRINLDIVYICPVGIGEEISL---GDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
           QVI +  D  Y     +G  + L   G  V  +G+  +I  S    GR+++  G+P D  
Sbjct: 46  QVIEVGTD--YAVAQVLGGTLGLPARGSTVRFYGKTLKIPVSEQLIGRILDGKGQPRD-H 102

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   +   ++  +     +R+  E+  +TGI  ID    L  GQ++ +F+G+G+  + 
Sbjct: 103 MPLPPPEDFRDVNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNL 162

Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           + +   R            V+   VG +  E   F++++     L+++V V+  + +   
Sbjct: 163 MAAQVVRQSTVRGSEEGFAVVFVGVGIKTEEALFFMDEFRKTGALRRAVAVLNLASDPVA 222

Query: 230 LRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R +AP   +TIAEY + + G +VL+++  +T +   +RE+++  GELP  RGYP  +++
Sbjct: 223 ERVLAPRVGLTIAEYLAWQLGYHVLVVITDMTNYCEGLRELSSGRGELPGRRGYPGYMYT 282

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G +   KG++T    + +  D+   PI D    I +G +VL+R++  +G Y
Sbjct: 283 DLATIYERAGKAHGRKGSVTQFPILTMPHDDITHPIPDLTGYITEGQLVLSRAMWGKGIY 342

Query: 349 PPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           PP D + S+SRLA  A        D K + ++L     +  E R++  + G R
Sbjct: 343 PPFDVIMSLSRLAKDAIGEGKTREDHKDVANTLIAAYSKALEIRNLATLVGER 395


>gi|42559026|gb|AAS20199.1| ATP synthase beta subunit [Kingia australis]
          Length = 413

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 34  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 150

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 151 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 210

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 328

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 329 KELQDIIAILG 339


>gi|29726118|gb|AAD00586.2| ATP synthase beta subunit [Euptelea polyandra]
 gi|33327749|gb|AAQ09238.1| ATP synthase beta subunit [Euptelea polyandra]
          Length = 492

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGAVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGXXPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|7708458|emb|CAB89919.1| ATP synthase beta subunit [Kalanchoe daigremontiana]
          Length = 490

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GVTLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NAKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +  A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|7708562|emb|CAB89953.1| ATP synthase beta subunit [Pterocarya fraxinifolia]
          Length = 486

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               G++ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGQIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|306820520|ref|ZP_07454153.1| V-type ATP synthase, subunit B [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551434|gb|EFM39392.1| V-type ATP synthase, subunit B [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 456

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 20/318 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDD---SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
             IS S    GR  N LG+PIDG D   S  K +++   M+ V     R  +E    TGI
Sbjct: 77  LEISLSKDILGRTFNGLGEPIDGSDPIISEKKYNVNGRPMNPVARKYPRDYLE----TGI 132

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVR 203
             ID  T L  GQ++ +F+ +G+  + L +   R      SD    ++ + +G +  +  
Sbjct: 133 SAIDSLTTLIRGQKLPIFSSNGLTHNQLAAQIVRQSKLKDSDEKFAIVFAGMGIKHDDYD 192

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFS-SKGDNVLLILDSITR 261
            F+  +        VV      ++PI+ +++ P TA+T AEY +  +G ++L+++  IT 
Sbjct: 193 FFMNAFEESGALSRVVSYINLADAPIVERISTPRTALTAAEYLAFEEGMHILVVMTDITS 252

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A ++REI++   E+P  +GYP  ++S+L  L ER G  + + G+IT +  + +  D+  
Sbjct: 253 YAEALREISSAREEVPSRKGYPGYLYSDLSTLYERAGMVKGKNGSITLIPILTMPNDDIT 312

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSL 376
            PI D    I +G IVL+R L +   YP ++ L S+SRL            D  ++ S L
Sbjct: 313 HPIPDLTGFITEGQIVLSRDLFQRNIYPAINILPSLSRLMKDGIGTGHTREDHDQVQSQL 372

Query: 377 THLIHRFEETRDIRLIGG 394
             L  R  E R +  I G
Sbjct: 373 FALYSRVIEVRSLSQIIG 390


>gi|213610098|ref|ZP_03369924.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 334

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 133/254 (52%), Gaps = 7/254 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P  
Sbjct: 83  ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215
            G ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + 
Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G 
Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  
Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319

Query: 336 IVLNRSLAEEGRYP 349
           +VL+R +A  G YP
Sbjct: 320 VVLSRQIASLGIYP 333


>gi|62085133|gb|AAX62972.1| ATP synthase beta subunit [Galearia filiformis]
          Length = 482

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E    R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPAGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|170178355|gb|ACB10597.1| ATP synthase beta subunit [Cornus capitata]
          Length = 455

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 156/306 (50%), Gaps = 20/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  P   G
Sbjct: 70  RIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRG 126

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 127 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQ 186

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 187 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 246

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 247 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 304

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 305 AHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQD 364

Query: 389 IRLIGG 394
           I  I G
Sbjct: 365 IIAILG 370


>gi|156530111|gb|ABU75152.1| AtpB [Brucea javanica]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ + +  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTXMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|115604941|ref|YP_784393.1| ATP synthase CF1 beta subunit [Drimys granadensis]
 gi|122164434|sp|Q06GZ0|ATPB_DRIGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112032669|gb|ABH88304.1| ATP synthase CF1 beta subunit [Drimys granadensis]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|212896610|gb|ACJ38508.1| membrane-bound ATP synthase subunit B [Neonotonia wightii]
          Length = 470

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLXMEMKES 202

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF 
Sbjct: 203 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFV 262

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 263 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 320

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 321 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 380

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 381 YKELQDIIAILG 392


>gi|148887707|gb|ABR15430.1| ATP synthase beta subunit [Biebersteinia heterostemon]
          Length = 473

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R 
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRX 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|158602253|gb|ABW74593.1| ATP synthase beta subunit [Anemonopsis macrophylla]
          Length = 476

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFLDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|89242552|gb|ABD64634.1| ATPase beta subunit [Alstroemeria sp. Qiu 96143]
          Length = 436

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GSTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 172

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 173 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 230

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 231 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 288

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +    
Sbjct: 289 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTS 348

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 349 QRYKELQDIIAILG 362


>gi|16943660|emb|CAD10755.1| ATP synthase, beta subunit [Campynema lineare]
          Length = 488

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|17224782|gb|AAL37112.1| ATP synthase beta subunit [Stemona japonica]
          Length = 497

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 104 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 221 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 280

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 338

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 398

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 399 ELQDIIAILG 408


>gi|149384391|gb|ABR25018.1| ATP synthase beta chain [Asplenium feei]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 157/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +          N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|17224790|gb|AAL37116.1| ATP synthase beta subunit [Metanarthecium luteo-viride]
          Length = 471

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NFGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|312285191|gb|ADQ64337.1| ATP synthase beta subunit [Anomospermum solimoesanum]
          Length = 468

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GVTLGRIFNVLGEPID---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|149384479|gb|ABR25062.1| ATP synthase beta chain [Dennstaedtia dissecta]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + + + +  I    P           F+TGI+V+D+  P  
Sbjct: 37  TTLGRISNVLGEPVDNPGPV-QSNTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNILRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMP-QPWIVGEEHYETAQGVKQTSQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|159227620|emb|CAJ80601.1| ATP synthase beta subunit [Withania somnifera]
          Length = 336

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|89242528|gb|ABD64622.1| ATPase beta subunit [Hortonia floribunda]
          Length = 436

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 171

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 172 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 231

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 232 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 289

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 290 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 349

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 350 RYKELQDIIAILG 362


>gi|119368000|dbj|BAF40483.1| ATP synthase beta subunit [Ixonanthes reticulata]
          Length = 489

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 154/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+ ID D  L     +  I    P  +        F+TGI+V+D+  P  
Sbjct: 97  STLGRIFNVLGETID-DLGLVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 156 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 215

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 216 EENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 334 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|46360667|gb|AAS89115.1| ATP synthase beta subunit [Fossombronia sp. Stotler &
           Crandall-Stotler 3940]
          Length = 382

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 24/306 (7%)

Query: 106 INALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           +N LG+P+D   +LG    D +  I    P           F+TGI+V+D+  P   G +
Sbjct: 6   LNVLGEPVD---NLGPVSSDTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGK 62

Query: 164 IGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--N 213
           IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N
Sbjct: 63  IGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQN 121

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 122 ISQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 181

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 182 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 239

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 240 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKRTLQRYKELQD 298

Query: 389 IRLIGG 394
           I  I G
Sbjct: 299 IIAILG 304


>gi|332184763|gb|AEE27017.1| ATP synthase alpha chain [Francisella cf. novicida 3523]
          Length = 513

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VAAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVTT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +        ++ ++VV AT+ +S  L+ +AP    ++ EYF  +G + L++ D +
Sbjct: 204 TIANIVRQLEEHGAMEHTIVVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYDDL 263

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGN 306
           T+ A + R+I+      P    YP  VF    RLLER              G  + + G+
Sbjct: 264 TKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKTGS 323

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A +
Sbjct: 324 LTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAAQT 383

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KKL   +   + ++ E
Sbjct: 384 KIIKKLGGGIRLALAQYRE 402


>gi|312285271|gb|ADQ64377.1| ATP synthase beta subunit [Strychnopsis thouarsii]
          Length = 469

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSSIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|56236594|gb|AAV84664.1| ATP synthase beta subunit [Thuja plicata]
          Length = 380

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 150/294 (51%), Gaps = 21/294 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TG
Sbjct: 81  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTKSPIHRSAPAFTQLDTKFSIFETG 137

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 138 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 196

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 197 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 257 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E
Sbjct: 315 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEE 368


>gi|7687974|emb|CAB89708.1| ATP synthase beta subunit [Degeneria vitiensis]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLAIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708169|emb|CAB90025.1| ATP synthase beta subunit [Bomarea hirtella]
          Length = 497

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GSTLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 218

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 219 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 276

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 277 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 334

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +    
Sbjct: 335 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTS 394

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 395 QRYKELQDIIAILG 408


>gi|7708292|emb|CAB90070.1| ATP synthase beta subunit [Eurya japonica]
 gi|14718048|gb|AAK72765.1| ATP synthase beta subunit [Eurya japonica]
          Length = 483

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQXLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|170293993|gb|ACB13090.1| ATP synthase beta subunit [Halimeda sp. CHR505644]
          Length = 369

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 157/306 (51%), Gaps = 19/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID-IFTPLCHGQ 162
           R+ N LG+P+D  + +   + ++ I    P     +     F+TGI+V+D +  P   G 
Sbjct: 23  RIFNVLGEPVDSFEKIST-ETNLPIHRPAPSFTQLETKPSIFETGIKVVDFLLAPYRRGG 81

Query: 163 RIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGD--N 213
           +IG+F G+G+GK+ L+     +         +   VGER RE      E  E  + D  N
Sbjct: 82  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEQN 141

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+TIAE+F   +  +VLL +D+I RF  +  E++
Sbjct: 142 LSESKVTLVYGQMNEPPGARMRVGLTALTIAEFFRDVQKQDVLLFIDNIFRFVQAGSEVS 201

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ SE+  L ERI  +  + G+IT++ ++ V  D+  DP   +  +
Sbjct: 202 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPAPATTFA 259

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++E +D
Sbjct: 260 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYSCAQNVQQTLQRYKELQD 318

Query: 389 IRLIGG 394
           I  I G
Sbjct: 319 IIAILG 324


>gi|152995985|ref|YP_001340820.1| F0F1 ATP synthase subunit alpha [Marinomonas sp. MWYL1]
 gi|190358144|sp|A6VWQ6|ATPA1_MARMS RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|150836909|gb|ABR70885.1| ATP synthase F1, alpha subunit [Marinomonas sp. MWYL1]
          Length = 510

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 161/332 (48%), Gaps = 11/332 (3%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I  N+D   I  V +GE   +  GD V   G     P      GR+IN +GKP+DG  +L
Sbjct: 62  IAFNVDEDEIGVVLLGEYWHLQAGDEVERLGHVVDVPVGDSLIGRIINPIGKPLDGKGNL 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G  +  + I    P  M+R  V    +TGI+VID   P+  GQR  +      GK T ++
Sbjct: 122 GTTE-RLPIERPSPAIMDRAGVSVPLQTGIKVIDALIPVGRGQRELILGDRQTGK-TAIA 179

Query: 180 MFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           M    +   K ++ +   +G+R   V + I        ++ +VVVV   +E P L  +AP
Sbjct: 180 MDTILNQRGKNVLCVYCAIGQRASGVAKVIATLREQGAMEYTVVVVTEGNEPPGLAYVAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A +IAEYF  +G +VL++ D +T  A + RE++      P    +P  +F    RLLE
Sbjct: 240 YAATSIAEYFMEQGRDVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     KE   G++TA+  +  +  + +  I  ++ SI DG I L+ +L E G  P VD 
Sbjct: 300 RATHLSKELGGGSLTALPIIETEAQDISAYIPTNLISITDGQIYLSPALFELGILPAVDV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+  KA  A  + +   L     +FEE
Sbjct: 360 GKSVSRVGGKAQRAAYRGVTVDLKLAYAQFEE 391


>gi|75318982|sp|O98766|ATPB_ASACA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|4099327|gb|AAD00585.1| ATP synthase beta subunit [Asarum canadense]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V     E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNLAESKVALVYGQXXEPPGARMRVGLTALTMAEYFRDVXEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAXKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|119350517|gb|ABL63209.1| AtpB [Picochlorum eukaryotum]
          Length = 392

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 157/309 (50%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D    + I    P  ++       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGEPVD---NLGPVDAPDRLPIHRSAPAFVDLDTELSIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + +
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVIN 154

Query: 213 NLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 155 ESKLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 214

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   +       ++   + R++E
Sbjct: 273 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGKTHYDCAQNVKQTLQRYKE 331

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 332 LQDIIAILG 340


>gi|7706846|emb|CAB90056.1| ATP synthase beta subunit [Adinandra dumosa]
          Length = 483

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   +  E++
Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQAGSEVS 276

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 394

Query: 390 RLIGG 394
             I G
Sbjct: 395 IAILG 399


>gi|15705378|gb|AAL05617.1| AtpB [Doryphora sassafras]
          Length = 487

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 215

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 216 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 275

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 276 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 333

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 334 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|5031143|gb|AAD38082.1|AF093421_1 ATP synthase beta subunit [Styloceras laurifolium]
          Length = 484

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D          S  I    P  +        F+TGI+V+D+  P 
Sbjct: 90  GATLGRIFNVLGEPVDNLGXXXXXXXS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 148

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 149 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 208

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 209 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 268

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 269 SEVSALLGXMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 326

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 327 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 386

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 387 LQDIIAILG 395


>gi|225420309|ref|ZP_03762612.1| hypothetical protein CLOSTASPAR_06652 [Clostridium asparagiforme
           DSM 15981]
 gi|225041126|gb|EEG51372.1| hypothetical protein CLOSTASPAR_06652 [Clostridium asparagiforme
           DSM 15981]
          Length = 462

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 164/325 (50%), Gaps = 24/325 (7%)

Query: 53  GKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINA 108
           G N+  +G++I I  D   I      E ++L +    L  H     I+ S    GR  N 
Sbjct: 35  GGNTRKIGRIIEIYGDKAIIQVFEGTEGMALRNTHTRLTGH--PMEIAVSEEMLGRTFNG 92

Query: 109 LGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           +G+PIDG   LG    D+ +++  K    + R+      +TGI  ID  T L  GQ++ +
Sbjct: 93  IGEPIDG---LGDIISDIKLDVNGKPLNPVTREYPRNYIRTGISAIDGLTTLIRGQKLPI 149

Query: 167 FAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV--- 219
           F+G+G+    L +   +     D  D+    + G  G  V+  + D+     ++S V   
Sbjct: 150 FSGNGLPHDQLAAQIVQQASLGDNSDEQFAIVFGAMG--VKYDVADFFRRTFEESGVSEH 207

Query: 220 ---VVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGE 275
               +  +++  + R + P   +T+AEY +  KG ++L+IL  +T +A ++RE++++ GE
Sbjct: 208 VSMFINLANDPVVERLITPKVVLTLAEYLAFEKGMHILVILTDMTSYAEAMREVSSSKGE 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P  +G+P  ++S+L  + ER G      G++T +  + +  D+   PI D    I +G 
Sbjct: 268 IPSRKGFPGYLYSDLASIYERAGIVAGRAGSVTQIPILTMPNDDITHPIPDLTGYITEGQ 327

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL 360
           IVL+R +  +  YPP++ L S+SRL
Sbjct: 328 IVLDRQMHGQSIYPPINVLPSLSRL 352


>gi|195183496|dbj|BAG66962.1| ATP synthase beta subunit [Gloeospermum sphaerocarpum]
          Length = 489

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +   +++  PA  +   +   F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPINRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   +E  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTQEGNDLYIEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|56236574|gb|AAV84654.1| ATP synthase beta subunit [Pseudotsuga menziesii]
          Length = 419

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 161/320 (50%), Gaps = 30/320 (9%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 34  GTTLGRIFNVLGEPVD---NLGPVDARITSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 90

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 91  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 148

Query: 217 SVVVVATS-------------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+   S             +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 149 SGVINEQSISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 208

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 209 VQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTD 266

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380
           P   +  +  D   V +R LA +G YP VDPL S S +  + W   E+  +    +   +
Sbjct: 267 PAPATTFAHSDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETL 325

Query: 381 HRFEETRDIRLIGGYRPGVD 400
            R++E +DI  I    PG+D
Sbjct: 326 QRYKELQDIIAI----PGLD 341


>gi|4995796|emb|CAB44269.1| H(+)-transporting ATP synthase [Sterculia apetala]
          Length = 481

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR++N LG+P+D   + G  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 91  GATLGRILNVLGEPVD---NFGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+ K+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVXKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 385

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 386 KELQDIIAILG 396


>gi|12004141|gb|AAG43910.1|AF213779_1 ATP synthase beta subunit [Hymenandra wallichii]
          Length = 487

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLHMEMKES 219

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +E P  R    LTA T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTAGTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|52220817|ref|YP_086973.1| ATP synthase CF1 beta subunit [Panax ginseng]
 gi|75322810|sp|Q68RZ9|ATPB_PANGI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|51235320|gb|AAT98516.1| ATPase beta subunit [Panax ginseng]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 35/368 (9%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KDRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR-------EVRE---FIED 208
           +IG+F G+G+GK+ L+    +  A++     V   +  ER R       E++E     E 
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTRGGNDLYMEMKESGVINEQ 225

Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
            + ++  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 226 NIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKEL 401

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 402 QDIIAILG 409


>gi|224830584|gb|ACN66387.1| ATP synthase beta chain [Strychnopsis thouarsii]
          Length = 489

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSSIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|149384601|gb|ABR25123.1| ATP synthase beta chain [Polystichopsis chaerophylloides]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVRSNATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|156622737|dbj|BAF76349.1| ATP synthase beta subunit [Gomortega keule]
          Length = 488

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 210

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 211 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 270

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 271 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 328

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 329 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 388

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 389 RYKELQDIIAILG 401


>gi|14718193|gb|AAK72835.1| ATP synthase beta subunit [Prunus persica]
          Length = 480

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    L A+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINXQNIAESKVALVYGQMNEPPGARMRVGLXALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|7687962|emb|CAB89703.1| ATP synthase beta subunit [Zygogynum pauciflorum]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTRSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|13236802|gb|AAK14706.1| ATP synthase beta subunit [Orbignya barbosiana]
          Length = 494

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQGVKQTSQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|7706854|emb|CAB90083.1| ATP synthase beta subunit [Aucuba japonica]
          Length = 484

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 97  GSTLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALPMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|1352831|sp|P48413|VATB_CYACA RecName: Full=V-type proton ATPase subunit B; Short=V-ATPase
           subunit B; AltName: Full=Vacuolar proton pump subunit B
 gi|576661|gb|AAA85821.1| V-ATPase B subunit [Cyanidium caldarium]
          Length = 500

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 158/332 (47%), Gaps = 21/332 (6%)

Query: 53  GKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALG 110
           G  S   GQV+ IN D  +V I     G +       F     +   S    GRV N  G
Sbjct: 53  GDGSVRRGQVLEINQDKAVVQIFEGTTGIDNKKTVCQFTGEILKTPVSLDMLGRVFNGSG 112

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           KPIDG   +   +  ++I  +     +R   E+ F+TGI  ID+   +  GQ+I +F+G+
Sbjct: 113 KPIDGGPPI-LPEAYLDIQGQPINPQSRTYPEEMFETGISSIDVMNSIARGQKIPLFSGA 171

Query: 171 GIGKSTLLSMFARSDCFDK----------------VIISLVGERGREVREFIEDYLGDN- 213
           G+  + + +   R  C                   ++ + +G      R F +D+  +  
Sbjct: 172 GLPHNEVAAQICRQVCLVSTCTLVKRSGKDEEDFAIVFAAMGVNMETARFFRQDFEENGA 231

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272
           +++  + +  +++  I R + P  A+T AEY +  KG +VL+IL  ++ +A ++RE++  
Sbjct: 232 MERVTLFLNLANDPTIERIITPRLALTFAEYLAYEKGKHVLVILTDMSAYADALREVSAA 291

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
             E+P  RGYP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I 
Sbjct: 292 REEVPGRRGYPGYMYTDLATIYERAGRVEGRPGSITQLPILTMPNDDITHPIPDLTGYIT 351

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +  I L+R L     YPP++ L S+SRL   A
Sbjct: 352 EEQIYLDRQLHNRQIYPPINVLPSLSRLMKSA 383


>gi|332678945|gb|AEE88074.1| ATP synthase alpha chain [Francisella cf. novicida Fx1]
          Length = 513

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VAAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVAT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +        ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++ D +
Sbjct: 204 TIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYDDL 263

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGN 306
           T+ A + R+I+      P    YP  VF    RLLER              G  + + G+
Sbjct: 264 TKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKTGS 323

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A +
Sbjct: 324 LTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAAQT 383

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KKL   +   + ++ E
Sbjct: 384 KIIKKLGGGIRLALAQYRE 402


>gi|42559062|gb|AAS20217.1| ATP synthase beta subunit [Trillium grandiflorum]
          Length = 482

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|14718105|gb|AAK72792.1| ATP synthase beta subunit [Laurelia novae-zelandiae]
          Length = 477

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 203

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 204 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 263

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 264 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 321

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 322 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 381

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 382 RYKELQDIIAILG 394


>gi|159227624|emb|CAJ80603.1| ATP synthase beta subunit [Vestia lycioides]
          Length = 336

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|118429169|gb|ABK91689.1| ATP synthase beta subunit [Azorhizophilus paspali]
          Length = 257

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 6/222 (2%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
            +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER RE
Sbjct: 22  LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTRE 81

Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
             +   +    N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I 
Sbjct: 82  GNDLYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 141

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+ 
Sbjct: 142 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 199

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            DP   +  + LD  +VL+R +A  G YP VDPL S SR  D
Sbjct: 200 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 241


>gi|5031153|gb|AAD38087.1|AF093426_1 ATP synthase beta subunit [Pseudowintera colorata]
          Length = 494

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRXAPAFIQLDTRLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|160890323|ref|ZP_02071326.1| hypothetical protein BACUNI_02764 [Bacteroides uniformis ATCC 8492]
 gi|270296893|ref|ZP_06203092.1| ATP synthase F1, beta subunit [Bacteroides sp. D20]
 gi|317479131|ref|ZP_07938271.1| ATP synthase F1 [Bacteroides sp. 4_1_36]
 gi|156860055|gb|EDO53486.1| hypothetical protein BACUNI_02764 [Bacteroides uniformis ATCC 8492]
 gi|270272880|gb|EFA18743.1| ATP synthase F1, beta subunit [Bacteroides sp. D20]
 gi|316904703|gb|EFV26517.1| ATP synthase F1 [Bacteroides sp. 4_1_36]
          Length = 511

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 45/327 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG   L +   +  I    P   +   V++   TGI+VID+  P   G 
Sbjct: 93  GRLMNVVGDSIDGMKELDRTG-AYPIHRDPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151

Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     ++  +   F   + + VGER RE    +RE IE  +   
Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KK +                     ++    +E P  R+   L+ +T+AE F   G
Sbjct: 210 GEEFKKGMEEGHWDLSKVDYDEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269

Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +   
Sbjct: 270 AETDGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D 
Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389
                E  ++   +  ++ R +E +DI
Sbjct: 388 HIVGVEHYEVAQRVKQILQRNKELQDI 414


>gi|15430328|gb|AAK95922.1| ATP synthase beta subunit [Attalea butyracea]
          Length = 496

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQGVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|62085149|gb|AAX62980.1| ATP synthase beta subunit [Ixonanthes chinensis]
          Length = 484

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 154/308 (50%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+ ID D  L     +  I    P  +        F+TGI+V+D+  P  
Sbjct: 97  ATLGRIFNVLGETID-DLGLIDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLAPYR 155

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 156 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 215

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 216 EENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 275

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 276 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 333

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 334 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKEL 393

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 394 QDIIAILG 401


>gi|159227298|emb|CAJ80440.1| ATP synthase beta subunit [Solanum amotapense]
          Length = 336

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLKRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|6467938|gb|AAF13237.1|AF197604_1 ATPase beta subunit [Atherosperma moschatum]
          Length = 487

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 215

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 216 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 275

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 276 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 333

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 334 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 393

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 394 RYKELQDIIAILG 406


>gi|6467947|gb|AAF13246.1|AF197613_1 ATPase beta subunit [Cissampelos pareira]
          Length = 487

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 47  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 107 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 163

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 222

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 223 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 282

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +D
Sbjct: 341 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQD 400

Query: 389 IRLIGG 394
           I  I G
Sbjct: 401 IIAILG 406


>gi|4206560|gb|AAD11711.1| ATP synthase beta subunit [Melicope ternata]
          Length = 468

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 87  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L E I  +  ++G+IT++ +V V  D+  DP 
Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQEXI--TSTKEGSITSIQAVYVPADDLTDPA 321

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 382 KELQDIIAILG 392


>gi|17224731|gb|AAL37087.1| ATP synthase beta subunit [Dioscorea membranacea]
          Length = 471

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 88  LGRIFNVLGXPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 145 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 204

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 205 EKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 264

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 265 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 322

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E 
Sbjct: 323 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYKEL 382

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 383 QDIIAILG 390


>gi|312285211|gb|ADQ64347.1| ATP synthase beta subunit [Cissampelos andromorpha]
          Length = 469

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 203

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 204 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 263

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 264 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +D
Sbjct: 322 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQD 381

Query: 389 IRLIGG 394
           I  I G
Sbjct: 382 IIAILG 387


>gi|169260971|gb|ACA52087.1| ATP synthase beta subunit [Equisetum x ferrissii]
          Length = 338

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 149/282 (52%), Gaps = 20/282 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   ++G  + + +  I    P  M+ +     F+TGI+V+D+  P   
Sbjct: 51  GRIFNVLGEPVD---NMGPVEATAKSPIHKPAPAFMDLETTVSIFETGIKVVDLLAPYRR 107

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 108 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 167

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 168 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 227

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 228 VSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 285

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 286 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL-QPWIVGEE 326


>gi|149384697|gb|ABR25157.1| ATP synthase beta chain [Lemmaphyllum microphyllum]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 170/340 (50%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSNATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+  ++      A++     V   +  ER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VIDEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|42559064|gb|AAS20218.1| ATP synthase beta subunit [Wurmbea pygmaea]
          Length = 489

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 212 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 387

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 388 QRYKELQDIIAILG 401


>gi|6467936|gb|AAF13235.1|AF197602_1 ATPase beta subunit [Cryptocarya meisneriana]
          Length = 481

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 209

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 210 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 327

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 387

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 388 RYKELQDIIAILG 400


>gi|56707241|ref|YP_169137.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669711|ref|YP_666268.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456301|ref|ZP_03664774.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254369926|ref|ZP_04985934.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874079|ref|ZP_05246789.1| ATP synthase alpha subunit [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81677143|sp|Q5NIK5|ATPA_FRATT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122971110|sp|Q14K08|ATPA_FRAT1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56603733|emb|CAG44695.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320044|emb|CAL08078.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568172|gb|EDN33826.1| hypothetical protein FTBG_01518 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840078|gb|EET18514.1| ATP synthase alpha subunit [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158350|gb|ADA77741.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 513

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VAAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVAT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +        ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++ D +
Sbjct: 204 TIANIVRQLEEHGAMEHAIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYDDL 263

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGN 306
           T+ A + R+I+      P    YP  VF    RLLER              G  + + G+
Sbjct: 264 TKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKTGS 323

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A +
Sbjct: 324 LTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAAQT 383

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KKL   +   + ++ E
Sbjct: 384 KIIKKLGGGIRLALAQYRE 402


>gi|149798673|gb|ABR32027.1| ATP synthase beta chain [Cheilanthes viridis]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 31/338 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 332 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|149798641|gb|ABR32011.1| ATP synthase beta chain [Adiantopsis radiata]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 31/338 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 332 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|190358291|sp|Q07YM7|ATPB2_SHEFN RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
          Length = 474

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 141/264 (53%), Gaps = 9/264 (3%)

Query: 133 PPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA+ +   + + F+TGI++ID+  PL  G + G+F G+G+GK+ LL+    +       
Sbjct: 120 PPAIAQLATKSQVFETGIKMIDVLMPLERGGKAGLFGGAGVGKTVLLTEMIHNMVGQHAG 179

Query: 192 ISL---VGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-S 246
           +S+   +GER RE  E + E      L   V+V    +E P  R      A+T+AEYF  
Sbjct: 180 VSIFCGIGERCREGEELYREMKTAGVLDNMVMVFGQMNEPPGARFRVGHAALTMAEYFRD 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL++D+I RF  +  E++   G++P   GY  ++ +EL +L +RI  +  + G 
Sbjct: 240 DEHRDVLLLIDNIFRFIQAGMEVSGLMGQMPARLGYQPTLGTELSQLEDRI--ANTDSGA 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ +V V  D+  DP A    S L   IVL+R  A EG YP +DPL S S++A  +  
Sbjct: 298 ITSIQAVYVPADDFTDPAAVHTFSHLSASIVLSRKRASEGLYPAIDPLLSNSKMATPSII 357

Query: 367 ADEK-KLVSSLTHLIHRFEETRDI 389
                 L   +   + ++ E +DI
Sbjct: 358 GRRHYDLAQKIRSTLAQYAELKDI 381


>gi|16943753|emb|CAD10767.1| atp synthase, beta subunit [Trillium erectum]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708566|emb|CAB89955.1| ATP synthase beta subunit [Pyrenacantha malvifolia]
          Length = 489

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|7708274|emb|CAB90062.1| ATP synthase beta subunit [Diospyros kaki]
          Length = 486

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 96  GVTLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|15430298|gb|AAK95907.1| ATP synthase beta subunit [Aphandra natalia]
          Length = 495

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718173|gb|AAK72825.1| ATP synthase beta subunit [Peumus boldus]
          Length = 488

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 209

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 210 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 327

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 387

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 388 RYKELQDIIAILG 400


>gi|224830504|gb|ACN66347.1| ATP synthase beta chain [Cissampelos andromorpha]
          Length = 468

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 98  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 154

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 155 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEX 213

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 214 NXVESKVALVYGXMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 273

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 274 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 331

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +D
Sbjct: 332 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQD 391

Query: 389 IRLIGG 394
           I  I G
Sbjct: 392 IIAILG 397


>gi|118498210|ref|YP_899260.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           novicida U112]
 gi|194324394|ref|ZP_03058167.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208780237|ref|ZP_03247579.1| ATP synthase F1, alpha subunit [Francisella novicida FTG]
 gi|254375019|ref|ZP_04990499.1| ATP synthase [Francisella novicida GA99-3548]
 gi|158512430|sp|A0Q8E1|ATPA_FRATN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118424116|gb|ABK90506.1| ATP synthase, F1 sector, subunit alpha [Francisella novicida U112]
 gi|151572737|gb|EDN38391.1| ATP synthase [Francisella novicida GA99-3548]
 gi|194321459|gb|EDX18944.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208743886|gb|EDZ90188.1| ATP synthase F1, alpha subunit [Francisella novicida FTG]
          Length = 513

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VAAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVAT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +        ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++ D +
Sbjct: 204 TIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYDDL 263

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGN 306
           T+ A + R+I+      P    YP  VF    RLLER              G  + + G+
Sbjct: 264 TKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKTGS 323

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A +
Sbjct: 324 LTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAAQT 383

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KKL   +   + ++ E
Sbjct: 384 KIIKKLGGGIRLALAQYRE 402


>gi|75336372|sp|Q9MRF3|ATPB_IDIAU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687986|emb|CAB89714.1| ATP synthase beta subunit [Idiospermum australiense]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|55056878|emb|CAF22239.1| ATP synthase beta subunit [Serenoa repens]
          Length = 466

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 329 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|149798639|gb|ABR32010.1| ATP synthase beta chain [Actiniopteris dimorpha]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNNTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|110349003|gb|ABG73073.1| ATP synthase beta chain [Regnellidium diphyllum]
          Length = 395

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + +   +  I    P           F+TGI+V+D+  P  
Sbjct: 5   ATLGRIFNVLGEPVDNMGPV-ENTTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W    +       +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGPEHYDTAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|14718017|gb|AAK72750.1| ATP synthase beta subunit [Colchicum speciosum]
          Length = 483

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 212

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 213 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 270

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 271 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 328

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 329 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 388

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 389 QRYKELQDIIAILG 402


>gi|7687982|emb|CAB89712.1| ATP synthase beta subunit [Hedycarya arborea]
          Length = 498

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|4206566|gb|AAD11714.1| ATP synthase beta subunit [Choisya mollis]
          Length = 444

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 66  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 122

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G + G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 123 PYRRGGKKGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 182

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 183 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|159227272|emb|CAJ80427.1| ATP synthase beta subunit [Solanum sisymbriifolium]
          Length = 336

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINXENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|56675682|emb|CAB63710.2| atp synthase beta subunit [Xerophyllum tenax]
          Length = 499

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6689367|emb|CAB65470.1| ATP synthase beta subunit [Tragopogon dubius]
          Length = 395

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 19/290 (6%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVE 142
           D++       +       GR+ N LG+PID   +LG  D S    I    P  +      
Sbjct: 90  DVIDTGAPLSVPVGGATLGRIFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKL 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
             F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   
Sbjct: 147 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 206

Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
           RE  + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    D 
Sbjct: 207 REGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNDQ 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 267 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSI 324

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 325 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374


>gi|317498070|ref|ZP_07956373.1| ATP synthase alpha/beta family protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894658|gb|EFV16837.1| ATP synthase alpha/beta family protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 461

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 25/354 (7%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGK 111
           +  +G++I +  D   I      E +SL +    L  H     ++P     GR  N +GK
Sbjct: 38  TKKIGRIIELYEDKAVIQVFEGTENMSLDNTRTKLTGHPMEVSLAPD--MLGRTFNGIGK 95

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           PIDG   L   D+  ++       + R+      +TGI  ID  T L  GQ++ +F+G+G
Sbjct: 96  PIDGLGPL-ITDVKRDVNGLPLNPVRRKYPRNYIRTGISAIDGLTTLIRGQKLPIFSGNG 154

Query: 172 IGKSTLLSMFARS----DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV------V 221
           +    L +   +     D  D+    + G  G  V+  + D+     ++S V       +
Sbjct: 155 LPHDQLAAQIVKQASLGDGSDEPFAVVFGAMG--VKHDVADFFQKTFEESGVADHVCMFL 212

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVAR 280
             +++  + R + P  A+T AEY +   + ++L+IL  +T FA ++RE++++ GE+P  +
Sbjct: 213 NLANDPVVERLITPKVALTAAEYLAFDCNMHILVILTDMTSFAEAMREVSSSKGEIPSRK 272

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP  ++SEL  L ER G  E  +G++T +  + +  D+   PI D    I +G IVL+R
Sbjct: 273 GYPGYLYSELATLYERAGIIEGAEGSVTQLPILTMPNDDITHPIPDLTGYITEGQIVLDR 332

Query: 341 SLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +L  +  YPP+  L S+SRL      +     D + L + L     +  E R++
Sbjct: 333 NLNGQTIYPPISVLPSLSRLMKDGIGEGYTREDHQDLANQLFSAYAKVGEARNL 386


>gi|224830492|gb|ACN66341.1| ATP synthase beta chain [Burasaia apetala]
          Length = 489

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHXSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|189314207|gb|ACD89003.1| ATP synthase beta subunit [Fibraurea chloroleuca]
 gi|312285199|gb|ADQ64341.1| ATP synthase beta subunit [Burasaia madagascariensis]
 gi|312285253|gb|ADQ64368.1| ATP synthase beta subunit [Penianthus longifolius]
          Length = 469

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|37720993|gb|AAN32499.1| ATP synthase beta subunit [Iris missouriensis]
          Length = 497

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 174/366 (47%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINLTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG      +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVYTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 226

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R++E +D
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTSQRYKELQD 403

Query: 389 IRLIGG 394
           I  I G
Sbjct: 404 IIAILG 409


>gi|75336457|sp|Q9MRR1|ATPB_CINCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687972|emb|CAB89704.1| ATP synthase beta subunit [Cinnamomum camphora]
          Length = 498

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|5758871|gb|AAD50845.1| ATP synthase beta subunit [Cyanella hyacinthoides]
          Length = 496

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDNRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|312285219|gb|ADQ64351.1| ATP synthase beta subunit [Cyclea hypoglauca]
          Length = 469

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 204

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 205 IVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 265 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +DI
Sbjct: 323 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQDI 382

Query: 390 RLIGG 394
             I G
Sbjct: 383 IAILG 387


>gi|290745841|gb|ADD51590.1| ATP synthase beta chain [Enterosora percrassa]
          Length = 421

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|149384701|gb|ABR25159.1| ATP synthase beta chain [Loxogramme abyssinica]
          Length = 426

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 28/316 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKLDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVD 400
           E +DI  I    PG+D
Sbjct: 332 ELQDIIAI----PGLD 343


>gi|37721005|gb|AAN32505.1| ATP synthase beta subunit [Xanthorrhoea resinosa]
          Length = 497

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 399 KXLQDIIAILG 409


>gi|224830506|gb|ACN66348.1| ATP synthase beta chain [Cissampelos capensis]
          Length = 489

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 44  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 219

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 220 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 279

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 280 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 337

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +D
Sbjct: 338 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQD 397

Query: 389 IRLIGG 394
           I  I G
Sbjct: 398 IIAILG 403


>gi|254369897|ref|ZP_04985906.1| ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122867|gb|EDO66984.1| ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 513

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VTAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCTGRILEVPVGEALLGRVVDALGNPIDGKGEVAT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +        ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++ D +
Sbjct: 204 TIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYDDL 263

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGN 306
           T+ A + R+I+      P    YP  VF    RLLER              G  + + G+
Sbjct: 264 TKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKTGS 323

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A +
Sbjct: 324 LTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAAQT 383

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KKL   +   + ++ E
Sbjct: 384 KIIKKLGGGIRLALAQYRE 402


>gi|149798671|gb|ABR32026.1| ATP synthase beta chain [Cheilanthes nitidula]
          Length = 426

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 165/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|13236756|gb|AAK14683.1| ATP synthase beta subunit [Reinhardtia simplex]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMDSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|241912825|gb|ACS72091.1| AtpB [Aa leucantha]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVADLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|159227488|emb|CAJ80535.1| ATP synthase beta subunit [Physalis sp. P078]
          Length = 336

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLXTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQXVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|21633459|gb|AAM52204.1| ATP synthase beta subunit [Humbertia madagascariensis]
          Length = 483

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F TGI+V+D+ +
Sbjct: 89  GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFDTGIKVVDLVS 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G    E I+ Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTELIMELINNIAKAHGGVSVFGGVGERTLEGIDLYMEVKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383

Query: 384 EETRDIRLIGG 394
           +E +D   I G
Sbjct: 384 KELQDTIAILG 394


>gi|14718001|gb|AAK72742.1| ATP synthase beta subunit [Chamaelirium luteum]
          Length = 492

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|114564212|ref|YP_751726.1| F0F1 ATP synthase subunit beta [Shewanella frigidimarina NCIMB 400]
 gi|114335505|gb|ABI72887.1| ATP synthase F1, beta subunit [Shewanella frigidimarina NCIMB 400]
          Length = 487

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 141/264 (53%), Gaps = 9/264 (3%)

Query: 133 PPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           PPA+ +   + + F+TGI++ID+  PL  G + G+F G+G+GK+ LL+    +       
Sbjct: 133 PPAIAQLATKSQVFETGIKMIDVLMPLERGGKAGLFGGAGVGKTVLLTEMIHNMVGQHAG 192

Query: 192 ISL---VGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-S 246
           +S+   +GER RE  E + E      L   V+V    +E P  R      A+T+AEYF  
Sbjct: 193 VSIFCGIGERCREGEELYREMKTAGVLDNMVMVFGQMNEPPGARFRVGHAALTMAEYFRD 252

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL++D+I RF  +  E++   G++P   GY  ++ +EL +L +RI  +  + G 
Sbjct: 253 DEHRDVLLLIDNIFRFIQAGMEVSGLMGQMPARLGYQPTLGTELSQLEDRI--ANTDSGA 310

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT++ +V V  D+  DP A    S L   IVL+R  A EG YP +DPL S S++A  +  
Sbjct: 311 ITSIQAVYVPADDFTDPAAVHTFSHLSASIVLSRKRASEGLYPAIDPLLSNSKMATPSII 370

Query: 367 ADEK-KLVSSLTHLIHRFEETRDI 389
                 L   +   + ++ E +DI
Sbjct: 371 GRRHYDLAQKIRSTLAQYAELKDI 394


>gi|156739682|gb|ABU93494.1| ATP synthase beta subunit [Polystichum anomalum]
          Length = 394

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 328 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 362


>gi|42558336|gb|AAS19877.1| ATP synthase beta chain [Enterosora percrassa]
          Length = 422

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|327403111|ref|YP_004343949.1| ATP synthase F1 subcomplex subunit beta [Fluviicola taffensis DSM
           16823]
 gi|327318619|gb|AEA43111.1| ATP synthase F1 subcomplex beta subunit [Fluviicola taffensis DSM
           16823]
          Length = 500

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 172/357 (48%), Gaps = 47/357 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N +G+ IDG  ++   +  + I  + P   +     +   TGI+VID+  P   G 
Sbjct: 90  GRLFNVVGEAIDGIGAVDNSN-GLPIHREAPRFEDLSTATEVLFTGIKVIDLIEPYAKGG 148

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212
           +IG+F G+G+GK+ L+     +       +S+   VGER RE    +RE +E  +   G+
Sbjct: 149 KIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYGE 208

Query: 213 NL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-----S 246
                                   K+  V    +E P  R    L+ +T+AEY+      
Sbjct: 209 GFLHSMEEGGWDLSKVDLNEMKESKATFVFGQMNEPPGARARVALSGLTMAEYYRDGDGE 268

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  ++G+
Sbjct: 269 GQGKDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRGS 326

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 327 ITSVQAVYVPADDLTDPAPANTFAHLDATTVLSRKISELGIYPAVDPLDSTSRILTPTIL 386

Query: 367 ADEKKLVSSLTHL-IHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +E    +S   + + R++E +DI  I     G+D + ++    VH+   +  FL Q
Sbjct: 387 GEEHYNTASRVKITLQRYKELQDIIAI----LGMDELSEEDKLIVHRARRVQRFLSQ 439


>gi|295311736|ref|YP_003587472.1| ATP synthase CF1 subunit beta [Oncidium Gower Ramsey]
 gi|254833113|gb|ACT83116.1| ATP synthase CF1 subunit beta [Oncidium Gower Ramsey]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTNLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEKDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|224830562|gb|ACN66376.1| ATP synthase beta chain [Penianthus longifolius]
          Length = 461

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|157888985|dbj|BAF80940.1| beta subunit of ATP synthesis [Paradavallodes multidentatum]
          Length = 464

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPIDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|224830512|gb|ACN66351.1| ATP synthase beta chain [Cissampelos pareira]
          Length = 487

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 172/367 (46%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS----- 217
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S     
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVINE 216

Query: 218 --------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
                    +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E
Sbjct: 217 QNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 276

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 277 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 334

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +
Sbjct: 335 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQ 394

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 395 DIIAILG 401


>gi|312285215|gb|ADQ64349.1| ATP synthase beta subunit [Cocculus orbiculatus]
          Length = 469

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|189314211|gb|ACD89005.1| ATP synthase beta subunit [Dioscoreophyllum cumminsii]
          Length = 468

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|312285195|gb|ADQ64339.1| ATP synthase beta subunit [Aspidocarya uvifera]
 gi|312285223|gb|ADQ64353.1| ATP synthase beta subunit [Disciphania killipii]
          Length = 469

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDNRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|224830526|gb|ACN66358.1| ATP synthase beta chain [Cyclea burmanii]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 44  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 219

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 220 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 279

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 280 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 337

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +D
Sbjct: 338 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQD 397

Query: 389 IRLIGG 394
           I  I G
Sbjct: 398 IIAILG 403


>gi|189314203|gb|ACD89001.1| ATP synthase beta subunit [Limacia blumei]
          Length = 468

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|7688021|emb|CAB89715.1| ATP synthase beta subunit [Laurus nobilis]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|312285257|gb|ADQ64370.1| ATP synthase beta subunit [Rhaptonema sp. McPherson 18854]
          Length = 469

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|312285201|gb|ADQ64342.1| ATP synthase beta subunit [Calycocarpum lyonii]
 gi|312285213|gb|ADQ64348.1| ATP synthase beta subunit [Cocculus carolinus]
 gi|312285227|gb|ADQ64355.1| ATP synthase beta subunit [Hyperbaena domingensis]
 gi|312285261|gb|ADQ64372.1| ATP synthase beta subunit [Sarcopetalum harveyanum]
 gi|312285269|gb|ADQ64376.1| ATP synthase beta subunit [Stephania longa]
          Length = 469

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|63253179|dbj|BAD98358.1| beta subunit of ATP synthesis [Davallia denticulata]
 gi|63253183|dbj|BAD98361.1| beta subunit of ATP synthesis [Davallia denticulata]
 gi|63253191|dbj|BAD98367.1| beta subunit of ATP synthesis [Davallia embolostegia]
          Length = 464

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRIFNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|14718177|gb|AAK72827.1| ATP synthase beta subunit [Phoenix canariensis]
          Length = 490

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830582|gb|ACN66386.1| ATP synthase beta chain [Stephania rotunda]
          Length = 445

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 194

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 195 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 254

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 255 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 312

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 313 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 372

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 373 YKELQDIIAILG 384


>gi|224830520|gb|ACN66355.1| ATP synthase beta chain [Cocculus pendulus]
          Length = 444

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 193

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 194 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 253

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 254 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 311

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 312 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 371

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 372 RYKELQDIIAILG 384


>gi|149384727|gb|ABR25172.1| ATP synthase beta chain [Pyrrosia polydactyla]
          Length = 426

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 27/338 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +  G  S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 37  TTLGRISNVLGEPVDNLGPVRSGATSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 94

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S  G  G   RE  + Y+        
Sbjct: 95  RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSASGGVGERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 332 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|42559050|gb|AAS20211.1| ATP synthase beta subunit [Tripladenia cunninghamii]
          Length = 444

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 51  GATXGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 107

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 108 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 166

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 167 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 224

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 225 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 282

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 283 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 342

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 343 QRYKELQDIIAILG 356


>gi|75333248|sp|Q9BA85|ATPB_NYPFR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236728|gb|AAK14669.1| ATP synthase beta subunit [Nypa fruticans]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|13236702|gb|AAK14656.1| ATP synthase beta subunit [Rhapis subtilis]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|134301276|ref|YP_001121244.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|158513844|sp|A4IW22|ATPA_FRATW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|134049053|gb|ABO46124.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 513

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 22/379 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S+     T+  L+  V  G+ +   G   D  G  + +N D V    +G  E I  
Sbjct: 29  GTIVSVADGIVTIYGLND-VAAGEMIKLPG---DVYGLALNLNTDSVGAVVLGDYEHIKE 84

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD  +  GR    P      GRV++ALG PIDG   +   DL+  I    P  + R+ V+
Sbjct: 85  GDKAYCIGRILEVPVGEALLGRVVDALGNPIDGKGEVAT-DLTSPIEKIAPGVIWRKSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +     IGK+ +   ++  +     K I   +G++  
Sbjct: 144 QALQTGIKSIDSMVPIGRGQRELIIGDRQIGKTAIAVDTIINQKGTGVKCIYVAIGQKAS 203

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +        ++ +++V AT+ +S  L+ +AP    ++ EYF  +G + L++ D +
Sbjct: 204 TIANIVRQLEEHGAMEHTIIVAATASDSAALQYIAPYAGCSMGEYFRDRGQDALIVYDDL 263

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGN 306
           T+ A + R+I+      P    YP  VF    RLLER              G  + + G+
Sbjct: 264 TKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARVNEEYVEKFTNGEVKGKTGS 323

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A +
Sbjct: 324 LTALPIIETQAGDISAFVPTNVISITDGQIFLETDLFNSGLRPAINPGNSVSRVGGAAQT 383

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KKL   +   + ++ E
Sbjct: 384 KIIKKLGGGIRLALAQYRE 402


>gi|29726120|gb|AAD00587.2| ATP synthase beta subunit [Illicium parviflorum]
          Length = 496

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+   LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFXVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|99640629|emb|CAJ45098.1| putative beta subunit of chloroplast ATP synthase [Plagiogyria
           pectinata]
          Length = 493

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 169/336 (50%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR  N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRTSNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGSFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V   ++E P  R     TA T+AEYF      +VLL +D+  RF  +  E
Sbjct: 223 QNISESKVALVYGQTNEPPGARTRVGSTAPTMAEYFRDVNKQDVLLFIDNTFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R  A +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 400 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|14718256|gb|AAK72866.1| ATP synthase beta subunit [Trillium erectum]
          Length = 483

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|17366676|sp|Q9BA84|ATPB_HYOLA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236738|gb|AAK14674.1| ATP synthase beta subunit [Hyophorbe lagenicaulis]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830546|gb|ACN66368.1| ATP synthase beta chain [Limacia blumei]
          Length = 475

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|224830508|gb|ACN66349.1| ATP synthase beta chain [Cissampelos grandifolia]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 172/367 (46%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 44  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS----- 217
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S     
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVINE 218

Query: 218 --------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
                    +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E
Sbjct: 219 QNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 278

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 279 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 336

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +
Sbjct: 337 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQ 396

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 397 DIIAILG 403


>gi|213023672|ref|ZP_03338119.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 160

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 86/143 (60%)

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHI
Sbjct: 2   PATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHI 61

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R LAE G YP +D  AS+SR      +      V     L+  F+  RD+  +G Y 
Sbjct: 62  VLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVGAYA 121

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419
            G D +LDKA+   P +  FL+Q
Sbjct: 122 KGSDPMLDKAITLWPQLEAFLQQ 144


>gi|119872764|ref|YP_930771.1| V-type ATP synthase subunit B [Pyrobaculum islandicum DSM 4184]
 gi|167016637|sp|A1RTZ6|VATB_PYRIL RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|119674172|gb|ABL88428.1| Sodium-transporting two-sector ATPase [Pyrobaculum islandicum DSM
           4184]
          Length = 467

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 175/353 (49%), Gaps = 20/353 (5%)

Query: 61  QVIRINLDIVYICPVGIGEEISL---GDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
           QVI +  D  Y     +G  + L   G  V  +G+  ++  S    GR+++  G+P D  
Sbjct: 46  QVIEVGTD--YAIAQVLGGTLGLPAKGSTVRFYGKTLKMPVSEELIGRILDGKGQPRDHM 103

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
                 D   ++  +     +R+  E+  +TGI  ID    L  GQ++ +F+G+G+  + 
Sbjct: 104 PLPPPEDFR-DVNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNM 162

Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           + +   R            V+   VG +  E   F++++     L+++V V+  + +   
Sbjct: 163 MAAQVVRQSTVRGSEEEFAVVFVGVGIKTEEALFFMDEFRRTGALRRAVAVLNLASDPVA 222

Query: 230 LRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R +AP   +TIAEY + + G +VL+++  +T +   +RE+++  GELP  RGYP  +++
Sbjct: 223 ERILAPRVGLTIAEYLAWQLGYHVLVVITDMTNYCEGLRELSSGRGELPGRRGYPGYMYT 282

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G +  +KG+IT    + +  D+   PI D    I +G +VL+R++  +G Y
Sbjct: 283 DLATIYERAGKAHGKKGSITQFPILTMPHDDITHPIPDLTGYITEGQLVLSRAMWGKGIY 342

Query: 349 PPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           PP D + S+SRLA  A        D K + ++L     +  E R++  + G R
Sbjct: 343 PPFDVIMSLSRLAKDAIGEGKTREDHKDVANTLISAYSKALEIRNLATLVGER 395


>gi|37544906|gb|AAN07056.1| ATP synthase beta subunit [Lilium superbum]
          Length = 487

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+G + L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGXTVLIMELINNIAXAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 332 PAATFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|21684875|emb|CAD11564.1| ATP synthase beta subunit [Hypolytrum nemorum]
          Length = 487

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P++   +LG  D S    I    P  +   +    F+TGI+V+D+  P
Sbjct: 99  ATLGRIFNVLGEPVE---NLGPVDTSTTSPIHRSAPAFVQLDQKFSIFETGIKVVDLLAP 155

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+G++ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 156 YRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 215

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 216 INEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDVLLFIDNIFRFVQA 275

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP  
Sbjct: 276 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 333

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R+LA +G YP V PL S S +       +E  +    +     R++
Sbjct: 334 ATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVGEEHYETAQRVKQTSQRYK 393

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 394 ELQDIIAILG 403


>gi|312285221|gb|ADQ64352.1| ATP synthase beta subunit [Diploclisia glaucescens]
          Length = 467

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|293363623|ref|ZP_06610377.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Mycoplasma alligatoris A21JP2]
 gi|292552813|gb|EFF41569.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Mycoplasma alligatoris A21JP2]
          Length = 440

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 184/381 (48%), Gaps = 31/381 (8%)

Query: 36  VTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGR- 92
           +T  S+ V   + V V+  +    LG+V+ ++ D   +   G    +S  D  V   G+ 
Sbjct: 51  ITQRSRNVGFNEVVAVYDREEGRRLGRVVDMSEDWTAVQLFGNNTGLSADDSRVEFLGKP 110

Query: 93  --FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGI 149
              R+ P     GR+ N LG+PIDG  ++     S   ++ +P     +   + F +TGI
Sbjct: 111 MELRVGPG--LLGRIFNGLGEPIDGYGNIFSS--SCYDVNGLPINPYARTYPRDFIQTGI 166

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--------------VIISLV 195
             ID    L  GQ++ +F+G+G+  + L +   R                    V+   +
Sbjct: 167 SAIDGMNTLIRGQKLPIFSGNGLPHNRLAAQIVRQATIINADGSSSGKSAEPFVVVFCAM 226

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVL 253
           G +    R F++D+    +  +VVV  +  ++P L ++ AP  A+T AEY +  K  +VL
Sbjct: 227 GVKYDVARFFLDDFERTGVLANVVVFLSLADAPSLERLVAPKCALTAAEYLAYEKNMHVL 286

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           +++  +T +  ++RE+++  GE+P  +GYP  ++S+L  L ER G      G+IT +  +
Sbjct: 287 VVMTDMTNYCEALREVSSIRGEVPSRKGYPGYLYSDLASLYERAGKISGSTGSITQIPIL 346

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----D 368
            +  D+ + PI D    I +G IVL+R L++ G YPPV  L S+SRL            D
Sbjct: 347 TMPNDDISHPIPDLSGYITEGQIVLDRELSQRGVYPPVAGLPSLSRLMKDGIGPGMTRED 406

Query: 369 EKKLVSSLTHLIHRFEETRDI 389
            K + S L     + ++ R++
Sbjct: 407 HKDVSSQLFAAYSKVKQVRNL 427


>gi|224830528|gb|ACN66359.1| ATP synthase beta chain [Cyclea hypoglauca]
          Length = 473

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 88  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 144

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 204

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 205 IVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 264

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 265 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E +DI
Sbjct: 323 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQDI 382

Query: 390 RLIGG 394
             I G
Sbjct: 383 IAILG 387


>gi|156598147|gb|ABU85338.1| ATP synthase CF1 beta subunit [Elaeis oleifera]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|6467937|gb|AAF13236.1|AF197603_1 ATPase beta subunit [Palmeria scandens]
          Length = 490

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSSPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 214

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 215 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 274

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 275 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 332

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 333 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 392

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 393 RYKELQDIIAILG 405


>gi|172036418|ref|YP_001802919.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. ATCC 51142]
 gi|171697872|gb|ACB50853.1| ATP synthase F1, alpha subunit [Cyanothece sp. ATCC 51142]
          Length = 502

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 7/335 (2%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           D LG    +++D + +  +G  E +  G  V   G+  +I       GR+++ LG+P+D 
Sbjct: 62  DILGIAFNLDVDELGVILLGNSEHLEAGQEVKRTGKIVQIPVGEALLGRIVDGLGRPLDN 121

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +    I  K PP ++R  V    +TG++V+D   P+  GQR  +     IGK+
Sbjct: 122 QGTIST-ETQFPIERKAPPFIHRAPVTVPLQTGLKVVDALIPVGRGQRELIIGDRQIGKT 180

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRK 232
            +   ++  + D     I   +G+R   V + IE     + L  S+VVVA  ++ P L+ 
Sbjct: 181 AIAVDTILNQKDKDVICIYCAIGQRTSAVAKVIEQLRQAEALDYSIVVVADGEDPPGLQY 240

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           + P  A +I EYF  KG +VL++ D +TR A + RE++      P    YP  +F    R
Sbjct: 241 ITPYAATSIGEYFMEKGRDVLIVYDDLTRHAWAYRELSLLLRRPPGREAYPGDIFYIHSR 300

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +E   G++TA+  +     + +  I  ++ SI DG I L+  L ++G  P 
Sbjct: 301 LLERSTHLREEWGGGSLTALPIIETQAQSISAYIPTNLISITDGQIYLSPDLYQKGILPA 360

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           V    SVSR+  K       ++   L     +F+E
Sbjct: 361 VSVGKSVSRVGGKTQLRAYGEVAGDLRLSYSQFQE 395


>gi|56675903|emb|CAB89964.2| ATP synthase beta subunit [Punica protopunica]
          Length = 478

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               G++ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGQIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEKNIAESKVXXVYGQMNEPPGARMRXGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGXMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|42558308|gb|AAS19863.1| ATP synthase beta chain [Ceradenia jungermannioides]
          Length = 422

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|224830534|gb|ACN66362.1| ATP synthase beta chain [Fibraurea tinctoria]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|6017828|gb|AAF01648.1| ATP synthase beta subunit [Xanthorhiza simplicissima]
          Length = 477

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI V+D+  
Sbjct: 83  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIXVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 200 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|5758863|gb|AAD50837.1| ATP synthase beta subunit [Colchicum autumnale]
          Length = 496

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 220 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 277

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 278 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 335

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 336 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 395

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 396 QRYKELQDIIAILG 409


>gi|194476686|ref|YP_002048865.1| ATP synthase subunit A [Paulinella chromatophora]
 gi|171191693|gb|ACB42655.1| ATP synthase subunit A [Paulinella chromatophora]
          Length = 505

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 193/426 (45%), Gaps = 27/426 (6%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q  EDY K++ +   G +  +      +  L Q  C+   +V     ++ L     +N
Sbjct: 13  LKQQIEDYDKSISISNVGTVLQVGDGIARIYGLQQ--CMAGELVEFEDGTEGLA----LN 66

Query: 67  LDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGD 123
           L+   +  V +GE + +  G +V   G+    P      GRV+NALG+PIDG     KGD
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSMVKATGKIAAVPVGDAMLGRVVNALGQPIDG-----KGD 121

Query: 124 LSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-L 178
           +  +    I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ + +
Sbjct: 122 IITDQTRLIESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAI 181

Query: 179 SMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
                    D V + + +G++   V   +E       L  +++V A++ E   L+ +AP 
Sbjct: 182 DTILNQKGQDVVCVYIAIGQKAASVANVVEVMRERGALDYTIIVAASASEPAALQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   IAEYF  KG   L++ D +T+ A + R++A      P    YP  +F    RLLER
Sbjct: 242 TGAAIAEYFMYKGKATLVVYDDLTKQAQAYRQMALLLRRPPGREAYPGDIFYCHSRLLER 301

Query: 297 IG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                    KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++  
Sbjct: 302 AAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + 
Sbjct: 362 ISVSRVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQKQLGRGKRLR 418

Query: 415 DFLKQS 420
           + LKQS
Sbjct: 419 ELLKQS 424


>gi|75333259|sp|Q9BA96|ATPB_CHAHU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236698|gb|AAK14654.1| ATP synthase beta subunit [Chamaerops humilis]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|75326833|sp|Q7HHX1|ATPB_BALSE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236744|gb|AAK14677.1| ATP synthase beta subunit [Dictyocaryum lamarckianum]
 gi|13236748|gb|AAK14679.1| ATP synthase beta subunit [Wettinia hirsuta]
 gi|13236754|gb|AAK14682.1| ATP synthase beta subunit [Leopoldinia pulchra]
 gi|13236772|gb|AAK14691.1| ATP synthase beta subunit [Balaka seemannii]
 gi|13236784|gb|AAK14697.1| ATP synthase beta subunit [Bentinckia nicobarica]
 gi|15430300|gb|AAK95908.1| ATP synthase beta subunit [Calyptronoma occidentalis]
 gi|15430310|gb|AAK95913.1| ATP synthase beta subunit [Bactris humilis]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|16416742|gb|AAL18395.1|AF313547_1 ATP synthase beta chain [Plagiogyria japonica]
          Length = 395

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 22/312 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR  N LG+P+D    + +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 8   GRTSNVLGEPVDNPGPV-ESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 66

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV---- 218
           +IG F G+G GK+ L++    +       +S+ G  G   RE  + Y+     K +    
Sbjct: 67  KIGSFGGAGAGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINERA 126

Query: 219 -------VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
                  +V   ++E P  R     TA T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 127 LSESKVALVYGQTNEPPGARTRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 186

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 187 ALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATTFA 244

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R  A +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 245 HLDATTVLSRGSAAKGTYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEPQD 303

Query: 389 IRLIGGYRPGVD 400
           I  I    PG+D
Sbjct: 304 IIAI----PGLD 311


>gi|312285233|gb|ADQ64358.1| ATP synthase beta subunit [Jateorhiza macrantha]
          Length = 469

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTNLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 196

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 197 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 256

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 257 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 314

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 315 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 374

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 375 RYKELQDIIAILG 387


>gi|296329317|ref|ZP_06871818.1| V-type ATP synthase, subunit B [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296153673|gb|EFG94490.1| V-type ATP synthase, subunit B [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 458

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFAAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|158602241|gb|ABW74587.1| ATP synthase beta subunit [Aconitum napellus]
          Length = 478

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D +           I    P  +        F+TGI+V+D+  P 
Sbjct: 84  GATLGRIFNVLGEPVD-NXGXXXXXXXXPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 142

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 143 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 202

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 203 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAG 262

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 263 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 320

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 321 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 380

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 381 LQDIIAILG 389


>gi|13236742|gb|AAK14676.1| ATP synthase beta subunit [Arenga pinnata]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|75333255|sp|Q9BA92|ATPB_TRAFO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236706|gb|AAK14658.1| ATP synthase beta subunit [Trachycarpus fortunei]
          Length = 496

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|156739802|gb|ABU93554.1| ATP synthase beta subunit [Tectaria devexa]
          Length = 394

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    PP          F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPPFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDHIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|189314215|gb|ACD89007.1| ATP synthase beta subunit [Coscinium blumeanum]
 gi|312285183|gb|ADQ64333.1| ATP synthase beta subunit [Anamirta cocculus]
          Length = 467

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|13236716|gb|AAK14663.1| ATP synthase beta subunit [Washingtonia filifera]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|15430302|gb|AAK95909.1| ATP synthase beta subunit [Geonoma oxycarpa]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7706835|emb|CAB89987.1| ATP synthase beta subunit [Acorus calamus]
          Length = 475

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFXTGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 218 GVINEEKIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 335

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R
Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEGHYETAQRVKQTLQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|13236786|gb|AAK14698.1| ATP synthase beta subunit [Burretiokentia hapala]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYXRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708456|emb|CAB89917.1| ATP synthase beta subunit [Juncus effusus]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 150/307 (48%), Gaps = 24/307 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D S  + I    P  +        F+TGI+V+D+  P
Sbjct: 104 ATLGRIFNVLGEPID---NLGPVDTSTTLPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 160

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S
Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKQS 218

Query: 218 -------------VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                         +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 219 GVINEKKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 278

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP
Sbjct: 279 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDP 336

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP V PL S S +        E  +    +     R
Sbjct: 337 APATTFAHLDATTVLSRPLAAKGIYPAVXPLDSTSTMLQPNIVGKEHYETAQRVKQTSQR 396

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 397 YKELQDI 403


>gi|224830572|gb|ACN66381.1| ATP synthase beta chain [Sarcopetalum harveyanum]
          Length = 469

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 192

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 193 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 252

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 253 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 310

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 311 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 370

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 371 RYKELQDIIAILG 383


>gi|224830536|gb|ACN66363.1| ATP synthase beta chain [Haematocarpus validus]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|158602281|gb|ABW74607.1| ATP synthase beta subunit [Myosurus minimus]
          Length = 479

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTQLAIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+     L++  A++     V      ER RE     +E  E 
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGXG-ERTREGNDLYKEMKES 200

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 201 GVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY T++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 261 QAGSEVSALLGRMPSAVGYQTTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 318

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD     +R LA +G YP VDPL S S  L  +    +  +    +   + R
Sbjct: 319 APATTFAHLDATXXXSRVLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKXTLQR 378

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 379 YKELQDIIAILG 390


>gi|13236794|gb|AAK14702.1| ATP synthase beta subunit [Hydriastele wendlandiana]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|13236750|gb|AAK14680.1| ATP synthase beta subunit [Orania trispatha]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|13236792|gb|AAK14701.1| ATP synthase beta subunit [Dictyosperma album]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|13236782|gb|AAK14696.1| ATP synthase beta subunit [Hydriastele pinangoides]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|292559444|ref|YP_003540812.1| ATP synthase F1 subunit alpha [Hartmannella vermiformis]
 gi|290775697|gb|ADD62196.1| ATP synthase F1 subunit alpha [Hartmannella vermiformis]
          Length = 535

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 183/371 (49%), Gaps = 18/371 (4%)

Query: 61  QVIRINLDIVYICPVGIGEE--ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           + + +NL+   +  + +G+E  + +GD V+   +   +       GRV+NAL +P D   
Sbjct: 71  RALALNLEYDSVRAILLGDERLVKVGDKVWRTKKIVSVKVGDKLVGRVLNALIEPADEKG 130

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   D  + I    P  ++R+RV +  +TG++V+D   P+  GQR  +      GK+ +
Sbjct: 131 VLEFVDERL-INVAAPDVISRERVAQPLETGLKVVDALVPIGRGQRELIIGDRQTGKTAI 189

Query: 178 L--SMFARSDCFDKVIISLV--GERGREVREFIEDYL--GDNLKKSVVVVATSDESPILR 231
              ++  + D  D VI   V  G+R  E+R  IE  L   + +  +V+V AT+ E   L 
Sbjct: 190 ALDAIINQQDARDPVICIYVAIGKRNSEIRR-IEKVLEAKNCMSYTVIVKATAGEPAPLL 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 249 YLAPYSGTTVGEYFRDRGQHSLIIYDDLSKHAVAYRQMSLLLRRPPAREAYPADVFYLHS 308

Query: 292 RLLERIG--PSEKEKGNITAV-ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           RLLER     S    G++T++ I   V GD  +  I  +V SI DG I L RSL +EG  
Sbjct: 309 RLLERSAKLASTLGGGSLTSLPIIETVQGD-ISAYIPTNVISITDGQIYLERSLFKEGIR 367

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V P  SVSR+   A +   K++  SL   + +F   R++     +   +D    + ++
Sbjct: 368 PAVSPGLSVSRVGSAAQNKVMKRVAGSLKLELAQF---REVEQFARFASDIDETTKRQIY 424

Query: 409 QVPIIYDFLKQ 419
           +  I+ + L Q
Sbjct: 425 RGTILTELLTQ 435


>gi|61968325|gb|AAX57089.1| ATP synthase beta subunit [Wielandia elegans]
          Length = 479

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+  LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSIGLAAKGIYPTVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|75326821|sp|Q7HDI4|ATPB_ACRAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75326826|sp|Q7HHW4|ATPB_COCNU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75326836|sp|Q7HHX4|ATPB_ROYRE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75326847|sp|Q7HHY5|ATPB_HYPCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582354|gb|AAF64292.1| ATP synthase beta subunit [Podococcus barteri]
 gi|13236724|gb|AAK14667.1| ATP synthase beta subunit [Borassus flabellifer]
 gi|13236726|gb|AAK14668.1| ATP synthase beta subunit [Hyphaene coriacea]
 gi|13236734|gb|AAK14672.1| ATP synthase beta subunit [Pseudophoenix vinifera]
 gi|13236736|gb|AAK14673.1| ATP synthase beta subunit [Ravenea hildebrandtii]
 gi|13236746|gb|AAK14678.1| ATP synthase beta subunit [Socratea exorrhiza]
 gi|13236752|gb|AAK14681.1| ATP synthase beta subunit [Manicaria saccifera]
 gi|13236758|gb|AAK14684.1| ATP synthase beta subunit [Dypsis lastelliana]
 gi|13236762|gb|AAK14686.1| ATP synthase beta subunit [Roystonea regia]
 gi|13236764|gb|AAK14687.1| ATP synthase beta subunit [Chambeyronia macrocarpa]
 gi|13236766|gb|AAK14688.1| ATP synthase beta subunit [Kentiopsis oliviformis]
 gi|13236776|gb|AAK14693.1| ATP synthase beta subunit [Ptychosperma burretianum]
 gi|13236778|gb|AAK14694.1| ATP synthase beta subunit [Veitchia sessilifolia]
 gi|13236780|gb|AAK14695.1| ATP synthase beta subunit [Areca vestiaria]
 gi|13236788|gb|AAK14699.1| ATP synthase beta subunit [Calyptrocalyx stenocrista]
 gi|13236790|gb|AAK14700.1| ATP synthase beta subunit [Cyphophoenix nucele]
 gi|13236796|gb|AAK14703.1| ATP synthase beta subunit [Oncosperma tigillarium]
 gi|13236800|gb|AAK14705.1| ATP synthase beta subunit [Cocos nucifera]
 gi|13236806|gb|AAK14708.1| ATP synthase beta subunit [Astrocaryum alatum]
 gi|13236808|gb|AAK14709.1| ATP synthase beta subunit [Calyptronoma rivalis]
 gi|15430304|gb|AAK95910.1| ATP synthase beta subunit [Oenocarpus bataua]
 gi|15430306|gb|AAK95911.1| ATP synthase beta subunit [Acrocomia aculeata]
 gi|15430314|gb|AAK95915.1| ATP synthase beta subunit [Gastrococos crispa]
 gi|15430316|gb|AAK95916.1| ATP synthase beta subunit [Barcella odora]
 gi|15430318|gb|AAK95917.1| ATP synthase beta subunit [Allagoptera arenaria]
 gi|15430320|gb|AAK95918.1| ATP synthase beta subunit [Butia eriospatha]
 gi|15430322|gb|AAK95919.1| ATP synthase beta subunit [Lytocaryum weddellianum]
 gi|15430324|gb|AAK95920.1| ATP synthase beta subunit [Syagrus glaucescens]
 gi|15430326|gb|AAK95921.1| ATP synthase beta subunit [Voanioala gerardii]
 gi|17933334|gb|AAL48247.1| ATP synthase beta subunit [Archontophoenix alexandrae]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|16943672|emb|CAD10764.1| atp synthase, beta subunit [Amianthium muscitoxicum]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830494|gb|ACN66342.1| ATP synthase beta chain [Calycocarpum lyonii]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|149384781|gb|ABR25199.1| ATP synthase beta chain [Thelypteris clypeolutata]
          Length = 394

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 242 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|149384603|gb|ABR25124.1| ATP synthase beta chain [Polystichum eximium]
          Length = 426

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALPGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|13236770|gb|AAK14690.1| ATP synthase beta subunit [Howea belmoreana]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|17933336|gb|AAL48248.1| ATP synthase beta subunit [Clinostigma savoryanum]
          Length = 497

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|13236718|gb|AAK14664.1| ATP synthase beta subunit [Corypha utan]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|13236760|gb|AAK14685.1| ATP synthase beta subunit [Prestoea acuminata]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|156622731|dbj|BAF76346.1| ATP synthase beta subunit [Schisandra repanda]
          Length = 487

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R 
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRX 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|6687485|emb|CAB64957.1| ATP synthase beta subunit [Eucnide bartonioides]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD    L+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTGLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|296241825|ref|YP_003649312.1| H(+)-transporting two-sector ATPase [Thermosphaera aggregans DSM
           11486]
 gi|296094409|gb|ADG90360.1| H(+)-transporting two-sector ATPase [Thermosphaera aggregans DSM
           11486]
          Length = 470

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 165/335 (49%), Gaps = 24/335 (7%)

Query: 43  VCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR--FRISPSA 99
           V  G+ V     N +  LGQVI ++     I   G   +I L      +     R+  S 
Sbjct: 29  VSYGELVEVSLPNGEVKLGQVIDVSKTATVIQVFGGVSDIDLQKTTVRYRGEVLRVPVSI 88

Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
              GR+++  G+PIDG      +D L      +   +++PP        +  +TGI  ID
Sbjct: 89  DMLGRILDGFGRPIDGGGEVVPEDYLDVNGYPLNPSARLPP-------NEFIETGISAID 141

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-SDCFDK-----VIISLVGERGREVREFIE 207
               +  GQ++ +F+GSG+  + + +   R +    K     V+ + +G    +   FIE
Sbjct: 142 GLFSIVRGQKLPIFSGSGLPHNRVAAQIVRQARVLGKEEKFAVVFAAIGVPYDDAMFFIE 201

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            +      +  V +  +  SP++ ++A P  A++IAE+ +   D +VL+++  +T +  +
Sbjct: 202 SFRKSGAMERTVALINTANSPVIERIATPRFALSIAEHLAWNYDMHVLVVMTDMTFYCEA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +RE++    E+P  RGYP  ++++L  + ER G +  +KG+IT    + +  D+   PI 
Sbjct: 262 LRELSAAREEVPGRRGYPGYMYTDLATIYERAGRALNKKGSITQFPILTMPDDDITHPIP 321

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           D    I +G IV +R +  +G YPP+DPL S+SRL
Sbjct: 322 DLTGYITEGQIVFSRGMWLKGVYPPIDPLMSLSRL 356


>gi|292559515|ref|YP_003540938.1| ATP synthase CF1 beta chain [Phoenix dactylifera]
 gi|28195665|gb|AAO27799.1| ATP synthase beta subunit [Phoenix dactylifera]
 gi|290790923|gb|ADD63178.1| ATP synthase CF1 beta chain [Phoenix dactylifera]
 gi|294620584|gb|ADF28153.1| ATP synthase CF1 beta chain [Phoenix dactylifera]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|19705055|ref|NP_602550.1| V-type ATP synthase subunit B [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|81763618|sp|Q8RI79|VATB_FUSNN RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|19712973|gb|AAL93849.1| V-type sodium ATP synthase subunit B [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 458

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFAAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|262066789|ref|ZP_06026401.1| V-type sodium ATPase, B subunit [Fusobacterium periodonticum ATCC
           33693]
 gi|291379592|gb|EFE87110.1| V-type sodium ATPase, B subunit [Fusobacterium periodonticum ATCC
           33693]
          Length = 458

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 158/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GRV + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRVFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+   +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFGAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|42558326|gb|AAS19872.1| ATP synthase beta chain [Ctenopteris lasiostipes]
          Length = 422

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|224830490|gb|ACN66340.1| ATP synthase beta chain [Burasaia madagascariensis]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|158602299|gb|ABW74616.1| ATP synthase beta subunit [Trollius ledebouri]
          Length = 471

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+    +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVX---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 194 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 253

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 311

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 312 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 371

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 372 KELQDIIAILG 382


>gi|149384679|gb|ABR25148.1| ATP synthase beta chain [Oleandra articulata]
          Length = 426

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 152/308 (49%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G
Sbjct: 39  LGRISNVLGEPVDNLGPVQSG-ATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 97

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     +   
Sbjct: 98  GKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINE 156

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 217 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 275 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 333

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 334 QDIIAILG 341


>gi|42559048|gb|AAS20210.1| ATP synthase beta subunit [Medeola virginiana]
          Length = 477

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|34582342|sp|Q9MU80|ATPB_CHASI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582348|gb|AAF64289.1| ATP synthase beta subunit [Chamaedorea seifrizii]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|256028325|ref|ZP_05442159.1| V-type ATP synthase subunit B [Fusobacterium sp. D11]
 gi|260495526|ref|ZP_05815651.1| ATP synthase archaeal, B subunit [Fusobacterium sp. 3_1_33]
 gi|289766251|ref|ZP_06525629.1| ATP synthase subunit beta [Fusobacterium sp. D11]
 gi|260196868|gb|EEW94390.1| ATP synthase archaeal, B subunit [Fusobacterium sp. 3_1_33]
 gi|289717806|gb|EFD81818.1| ATP synthase subunit beta [Fusobacterium sp. D11]
          Length = 458

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFAAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|155029327|dbj|BAF75547.1| ATP synthase beta subunit [Wetria insignis]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+ +D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGESVD---ELGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|63253195|dbj|BAD98370.1| beta subunit of ATP synthesis [Davallia epiphylla]
          Length = 464

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRIFNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|30351909|emb|CAD48107.1| ATP synthase beta subunit [Merwilla plumbea]
          Length = 494

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 159

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEY     + +VLL +D+I RF  
Sbjct: 220 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYIRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 398 KELQDIIAILG 408


>gi|13236720|gb|AAK14665.1| ATP synthase beta subunit [Sabal domingensis]
          Length = 497

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|206896222|ref|YP_002247013.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Coprothermobacter proteolyticus DSM 5265]
 gi|238058264|sp|B5Y8B6|VATB_COPPD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|206738839|gb|ACI17917.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 458

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 157/317 (49%), Gaps = 14/317 (4%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GRV + LG+P+DG       D  ++I       ++R+   +  +TGI  ID    
Sbjct: 81  SEGILGRVFDGLGEPLDGKPQPFV-DKYVDINGAPMNPVSREYPAEFIQTGISAIDGMNT 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLG 211
           L  GQ++ +F+GSG+  + L +  A       S+    V+ + +G    E   FI+ +  
Sbjct: 140 LVRGQKLPIFSGSGLPHARLAAQIASQAKVLSSEEKFAVVFAAMGITFEEANFFIQSFQK 199

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
              +++SV+ +  +D+  I R   P  A+  AEY + + D +VL IL  +T +  ++REI
Sbjct: 200 TGAIERSVLFLNLADDPTIERIATPRFALAAAEYLAFEKDMHVLAILTDMTNYCEALREI 259

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +    E+P  RGYP  ++++L  + ER G  + +KG+IT +  + +  D+   PI D   
Sbjct: 260 SAARREVPGRRGYPGYMYTDLASIYERAGRIKGKKGSITQIPILTMPEDDRTHPIPDLTG 319

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFE 384
            I +G I L+R L  +  YPP+D L S+SRL  +         D   + + L     R +
Sbjct: 320 YITEGQIFLSRDLQHKNIYPPIDVLQSLSRLMQRGIGEGHTREDHSAVSNQLYAAYARGK 379

Query: 385 ETRDIRLIGGYRPGVDL 401
           E R++ ++ G     DL
Sbjct: 380 EARELEIVLGEAALTDL 396


>gi|42559058|gb|AAS20215.1| ATP synthase beta subunit [Smilax rotundifolia]
          Length = 459

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 83  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSSPAFIQLDTKLSIFETGIKVVDLLA 139

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 200 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 377

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 378 KELQDIIAILG 388


>gi|75333233|sp|Q9BA69|ATPB_ELAOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236804|gb|AAK14707.1| ATP synthase beta subunit [Elaeis oleifera]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|75336641|sp|Q9MU82|ATPB_CALUS RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582344|gb|AAF64287.1| ATP synthase beta subunit [Calamus usitatus]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|13236740|gb|AAK14675.1| ATP synthase beta subunit [Wendlandiella gracilis var. polyclada]
          Length = 498

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 156/315 (49%), Gaps = 20/315 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           +       GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+
Sbjct: 100 VPAGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVV 156

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+  
Sbjct: 157 DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEM 216

Query: 212 --------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSIT 260
                    N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I 
Sbjct: 217 KESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF 276

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 277 RFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDL 334

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   
Sbjct: 335 TDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQT 394

Query: 380 IHRFEETRDIRLIGG 394
             R++E +DI  I G
Sbjct: 395 SQRYKELQDIIAILG 409


>gi|5001589|gb|AAD37041.1|AF092115_1 ATP synthase beta subunit [Kingdonia uniflora]
          Length = 475

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D   
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDHLA 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PXRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + NVLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEPNVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+    ER   +  +KG+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSXLLGRMPSAVGYQPTLSTEMGTXQERX--TXTKKGSITSIXAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|323715428|gb|ADY04782.1| ATP synthase beta subunit [Diplopanax stachyanthus]
          Length = 469

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+ +  
Sbjct: 84  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVYLLP 140

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 378

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 379 KELQDIIAILG 389


>gi|149384731|gb|ABR25174.1| ATP synthase beta chain [Selliguea lanceolata]
          Length = 426

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 169/338 (50%), Gaps = 27/338 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +  G  S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 37  TTLGRISNVLGEPVDNLGPVRSGATSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 94

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+        
Sbjct: 95  RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 332 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|63253139|dbj|BAD98328.1| beta subunit of ATP synthesis [Araiostegia faberiana]
 gi|63253147|dbj|BAD98334.1| beta subunit of ATP synthesis [Araiostegia parvipinnula]
 gi|63253151|dbj|BAD98337.1| beta subunit of ATP synthesis [Araiostegia perdurans]
          Length = 464

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPIDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|33318663|gb|AAQ05215.1| ATP synthase beta subunit [Dioon purpusii]
          Length = 475

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 200

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 201 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 260

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L  RI  +  ++G+IT++ +V V  D+  DP
Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQXRI--TSTKEGSITSIQAVYVPADDLTDP 318

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 319 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKXTLQ 377

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 378 RYKELQDIIAILG 390


>gi|261286610|gb|ACX68549.1| ATP synthase [Acetabularia dentata]
          Length = 272

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 143/273 (52%), Gaps = 19/273 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LGK +L+  + I    P  ++       F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGKVELNDGLPIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVIN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 ESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + LD   VL+R LA +G YP VDPL   S +
Sbjct: 237 TFAHLDATTVLSRGLAXKGIYPAVDPLDXTSTM 269


>gi|61968291|gb|AAX57072.1| ATP synthase beta subunit [Phyllanthus lokohensis]
          Length = 479

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---ELGPVDTRTTSAIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D   
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDLAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|6467948|gb|AAF13247.1|AF197614_1 ATPase beta subunit [Cocculus trilobus]
          Length = 491

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 216

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 217 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 276

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 334

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 335 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 394

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 395 YKELQDIIAILG 406


>gi|224830532|gb|ACN66361.1| ATP synthase beta chain [Diploclisia glaucescens]
          Length = 489

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|42559038|gb|AAS20205.1| ATP synthase beta subunit [Pandanus copelandii]
          Length = 484

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+PID    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPIDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|15430312|gb|AAK95914.1| ATP synthase beta subunit [Desmoncus orthacanthos]
          Length = 498

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|224830530|gb|ACN66360.1| ATP synthase beta chain [Dioscoreophyllum cumminsii]
          Length = 489

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|75326846|sp|Q7HHY4|ATPB_SALZA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582356|gb|AAF64293.1| ATP synthase beta subunit [Metroxylon vitiense]
 gi|13236730|gb|AAK14670.1| ATP synthase beta subunit [Salacca zalacca]
 gi|13236732|gb|AAK14671.1| ATP synthase beta subunit [Mauritia flexuosa]
          Length = 498

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|149384771|gb|ABR25194.1| ATP synthase beta chain [Macrothelypteris torresiana]
          Length = 425

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|195468861|dbj|BAG66953.1| ATP synthase beta subunit [Anchietea parvifolia]
          Length = 489

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 168/367 (45%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTLGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS----- 217
           +IG+F G+G+GK+ L+     +    K    +    G   R    + L   +K+S     
Sbjct: 159 KIGLFGGAGVGKTVLIMELINN--IAKAHGGVSVFGGGGERPREGNDLYTEMKESGVLNE 216

Query: 218 --------VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                    +V    +E P+ R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 217 ANFAESKVALVYGQMNEPPVARMKVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 276

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 277 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 334

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +
Sbjct: 335 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEEHYETAQKVKQTLQRYKELQ 394

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 395 DIIAILG 401


>gi|86145158|ref|ZP_01063489.1| ATP synthase subunit A [Vibrio sp. MED222]
 gi|85836735|gb|EAQ54855.1| ATP synthase subunit A [Vibrio sp. MED222]
          Length = 513

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 165/348 (47%), Gaps = 32/348 (9%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           + +NLD   +  V +G   ++S G  V   GR    P      GRV+N LG+PIDG    
Sbjct: 62  LALNLDTHSVGAVVMGPYTDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPIDG---- 117

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG +S + +  V    P  + R+ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 118 -KGPVSCDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQTGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPIL 230
            L   ++  + D   K +   +G++   +   +   ED+  D LK ++VVVA++ ES  L
Sbjct: 177 ALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEDH--DALKNTIVVVASASESAAL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF   
Sbjct: 235 QYLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLH 294

Query: 291 PRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            RLLER              G  + + G++TA+  +     + +  +  +V SI DG + 
Sbjct: 295 SRLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVF 354

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   L   G  P VDP  SVSR+   A     KKL   +   + ++ E
Sbjct: 355 LQTQLFNSGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQYRE 402


>gi|224830566|gb|ACN66378.1| ATP synthase beta chain [Pericampylus glaucus]
          Length = 489

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|149384775|gb|ABR25196.1| ATP synthase beta chain [Pseudophegopteris cruciata]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|42558352|gb|AAS19885.1| ATP synthase beta chain [Grammitis parva]
          Length = 422

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVQSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESNVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|149384865|gb|ABR25241.1| ATP synthase beta chain [Gymnocarpium dryopteris]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|91202301|emb|CAJ75361.1| strongly similar to ATPA gene encoding subunit alpha of ATP
           synthase [Candidatus Kuenenia stuttgartiensis]
          Length = 513

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 148/288 (51%), Gaps = 6/288 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+A+G+P+D    +      + I  + P  ++R  V    +TGI+VID   P+  GQ
Sbjct: 114 GRVIDAVGRPLDNYGPVRTTHRQI-IEREAPAIIDRSPVNIPLQTGIKVIDALIPIGRGQ 172

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219
           R  +      GK+T+   ++  + D     +   +G+R   V + I D    D L  +++
Sbjct: 173 RELILGDRQTGKTTIALDTIINQKDKGVICVYCAIGQRSSSVAKLIADLRKNDVLDNTII 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA  + +P ++ +AP  A  +AEYF  KG++VL++ D +T  A + RE++      P  
Sbjct: 233 VVAAGESTPGMKYIAPYAATAMAEYFMYKGEDVLIVYDDLTNHARAYRELSLLLRRPPGR 292

Query: 280 RGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +P  +F    RLLER    +KE   G++T++  +  +  N +  I  ++ SI DG I 
Sbjct: 293 EAFPGDIFYIHSRLLERSTHLKKELGGGSLTSLPIIETEAQNISAYIPTNLISITDGQIY 352

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L+  LA++G  P V+   SVSR+  KA     + + S L     +FEE
Sbjct: 353 LSPELAQKGIMPAVNVGRSVSRVGGKAQFPSYRMVASDLRLSYAQFEE 400


>gi|15430308|gb|AAK95912.1| ATP synthase beta subunit [Aiphanes horrida]
          Length = 498

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|75333249|sp|Q9BA86|ATPB_PHODC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236722|gb|AAK14666.1| ATP synthase beta subunit [Phoenix dactylifera]
          Length = 498

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|14718197|gb|AAK72837.1| ATP synthase beta subunit [Qualea sp. Anderson 13660]
          Length = 496

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+++AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALSMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D   DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADXLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 XATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|169260973|gb|ACA52088.1| ATP synthase beta subunit [Helminthostachys zeylanica]
          Length = 290

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 21/285 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D S    + K  PA  R   +   F+TGI+V+D+  P
Sbjct: 5   ATPGRIFNVLGEPVD---DLGPVDASETSPIHKPAPAFTRLDTKLSIFETGIKVVDLLAP 61

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 62  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 120

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +ESP  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 121 VINEQNISESKVALVYGQMNESPGARTRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 180

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 181 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 238

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +  +  D   VL+R LA +G YP VDPL S S +   +   +E
Sbjct: 239 PATTFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEE 283


>gi|254303516|ref|ZP_04970874.1| V-type two sector ATPase, V(1) subunit B [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323708|gb|EDK88958.1| V-type two sector ATPase, V(1) subunit B [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 458

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFAAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|224830484|gb|ACN66337.1| ATP synthase beta chain [Anamirta cocculus]
          Length = 488

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 211

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 212 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 271

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 272 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 329

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 330 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 389

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 390 RYKELQDIIAILG 402


>gi|49182404|gb|AAT57681.1| ATP synthase beta chain [Andreaea rothii]
          Length = 369

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D+S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVIDEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLSFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLGTEMGTSQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|241912882|gb|ACS72119.1| AtpB [Ponthieva villosa]
          Length = 489

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  TTLGRIFNVIGEPVD---NLGPVDIYTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
                +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|159232284|emb|CAJ80657.1| ATP synthase beta subunit [Jaltomata dentata]
          Length = 328

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 143/275 (52%), Gaps = 19/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 35  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 151

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 152 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 211

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 304


>gi|21633351|gb|AAM52150.1| ATP synthase beta subunit [Hildebrandtia promontorii]
          Length = 487

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +     +  PA  +   +   F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTKTTSPFHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G    E  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTXEGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|149798669|gb|ABR32025.1| ATP synthase beta chain [Cheilanthes eatonii]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|45653|emb|CAA41372.1| F1 subunit [Propionigenium modestum]
          Length = 410

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 23/324 (7%)

Query: 74  PVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM--- 129
           P G+ E    GD V   G+   +       GRV+N+LG+PIDG     KG+L  E M   
Sbjct: 18  PTGVKE----GDEVRATGQIAAVGAGEALLGRVVNSLGEPIDG-----KGELKTEKMMPL 68

Query: 130 -SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--LLSMFARSDC 186
             K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK+   L ++  + D 
Sbjct: 69  DRKAYGIISRKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAVALDAIINQKDT 128

Query: 187 FDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
             K I   +G++   V + +   ED     L+ ++VV AT+ ES  L+ MAP T V++ E
Sbjct: 129 GVKCIYVAIGQKRSTVAQIVKRLED--AGALEYTIVVAATASESAPLQYMAPYTGVSMGE 186

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  KG++VL++ D +++ A + RE++      P    +P  VF    RLLER      E
Sbjct: 187 YFMDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAFPGDVFYLHSRLLERAAKLSDE 246

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+ 
Sbjct: 247 IGAGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPAINAGISVSRVG 306

Query: 362 DKAWSADEKKLVSSLTHLIHRFEE 385
             A     K++ + +   + ++ E
Sbjct: 307 GAAQIKAMKQVAAQVKLELAQYNE 330


>gi|6017832|gb|AAF01650.1| ATP synthase beta subunit [Sargentodoxa cuneata]
          Length = 492

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIXVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|5001573|gb|AAD37033.1| ATP synthase beta subunit [Austrobaileya scandens]
          Length = 483

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+ EYF    + +VLL +D+I+RF  
Sbjct: 206 VINEQNIAESKVALVYGQMNEPPGARLRVGLTALTMXEYFRDVNEQDVLLFIDNISRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 383

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 384 KELQDIIAILG 394


>gi|290745960|gb|ADD51645.1| ATP synthase beta chain [Terpsichore sp. MAS-2010f]
          Length = 409

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|149384543|gb|ABR25094.1| ATP synthase beta chain [Elaphoglossum flaccidum]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|171184691|ref|YP_001793610.1| V-type ATP synthase subunit B [Thermoproteus neutrophilus V24Sta]
 gi|229558450|sp|B1YAT5|VATB_THENV RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|170933903|gb|ACB39164.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermoproteus neutrophilus V24Sta]
          Length = 467

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 176/353 (49%), Gaps = 20/353 (5%)

Query: 61  QVIRINLDIVYICPVGIGEEISL---GDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
           QVI +  D  Y     +G  + L   G  V  +G+  ++  S    GR+++  G+P D  
Sbjct: 46  QVIEVGTD--YAVAQVLGGTLGLPAKGSTVRFYGKTLKLPVSEELIGRILDGKGQPRD-H 102

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   +   ++  +     +R+  E+  +TGI  ID    L  GQ++ +F+G+G+  + 
Sbjct: 103 MPLPPPEDFRDVNGEPLNPYSREYPEEPIETGISAIDGLYTLVRGQKLPIFSGTGLPHNL 162

Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           + +   R            V+   VG +  E   F++++     L+++V V+  + +   
Sbjct: 163 MAAQVVRQSTVRGSEEGFAVVFVGVGIKTEEAIFFMDEFRKTGALRRAVAVLNLASDPVA 222

Query: 230 LRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R +AP   +TIAEY + + G +VL+++  +T +   +RE+++  GELP  RGYP  +++
Sbjct: 223 ERILAPRVGLTIAEYLAWQLGYHVLVVITDMTNYCEGLRELSSGRGELPGRRGYPGYMYT 282

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G +  +KG++T    + +  D+   PI D    I +G +VL+RS+  +G Y
Sbjct: 283 DLATIYERAGKARGKKGSVTQFPILTMPHDDITHPIPDLTGYITEGQLVLSRSMWGKGIY 342

Query: 349 PPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           PP D + S+SRLA  A        D K + ++L     +  E R++  + G R
Sbjct: 343 PPFDVIMSLSRLAKDAIGEGKTREDHKDVANTLISAYSKALELRNLATLVGER 395


>gi|160688728|gb|ABX45144.1| ATPase subunit 1 [Polysphondylium pallidum]
          Length = 533

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 208/456 (45%), Gaps = 45/456 (9%)

Query: 1   MQKNLETLAQ-LAEDYSK------NLVVQGGYISSITSVYYTVTCLSQY---VCLGDFVV 50
           M KN E   Q L ++++       NL +   Y+ S+   Y  V    ++   + + D VV
Sbjct: 1   MNKNQELYIQNLVQNFTNERKKFLNLKIFVNYLKSLNQRYNFVKNAGKFGKVLFIKDGVV 60

Query: 51  H-QGKNSDNLGQVIR----------INLDIVYICPVGIGEEISLGDLVFHWG-------- 91
              G N   +G+ +           +NL+   +  V  GE     D + H G        
Sbjct: 61  KVSGLNKIKIGEKVEFLGKNLFGMALNLEANSVGIVIFGE-----DKLIHEGVIVKRCDQ 115

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            F I       GRV++ LG+PIDG + +   K    + +  K P  + R+ V +   TG+
Sbjct: 116 NFAIKIDRTMLGRVVDVLGQPIDGKNEIKETKNARLISLERKAPGIVTRKSVHESMLTGV 175

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206
           +++D   P+  GQR  +      GKS +      +   +K II +   VG++   +R  +
Sbjct: 176 KIVDALLPIGRGQRELIIGDRQTGKSAIAIDAILNQKTNKDIICVYVSVGQKKSTIRRLV 235

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E   +   L+ S++VV+T+ ++  L+ +AP +   I E+F  KG++ L+I D +++ A +
Sbjct: 236 EMLNMKGALEYSIIVVSTASDASPLQFLAPYSGCAIGEFFRDKGEHALIIYDDLSKHAVA 295

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDP 323
            R+++      P    YP  VF    RLLER     ++   G++TA   +     + +  
Sbjct: 296 YRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKLNEKYGSGSLTAFPIIETQAGDVSAY 355

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           I  +V SI DG I L + L  +G  P V+   SVSR+   A SA  K+L  +L   + ++
Sbjct: 356 IPTNVISITDGQIFLEKDLFNKGIRPAVNVGLSVSRVGSAAQSAVMKRLAGALKLELAQY 415

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +    D +   A+ +  I+ + LKQ
Sbjct: 416 ---RELARFEQFSSNNDAVTTAALKKGKIVIEMLKQ 448


>gi|241912898|gb|ACS72127.1| AtpB [Pterichis triloba]
          Length = 489

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVIGEPVD---NLGPVDICTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
                +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|149798665|gb|ABR32023.1| ATP synthase beta chain [Bommeria hispida]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|42558432|gb|AAS19925.1| ATP synthase beta chain [Microgramma percussa]
          Length = 422

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 29/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 74  LGRIFNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 368 LQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 400


>gi|32815653|gb|AAP88223.1| ATP synthase beta subunit [Platycarya strobilacea]
          Length = 457

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +I +F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIXLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 373 KELQDIIAILG 383


>gi|42558310|gb|AAS19864.1| ATP synthase beta chain [Ceradenia kalbreyeri]
          Length = 422

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|302824549|ref|XP_002993917.1| hypothetical protein SELMODRAFT_236855 [Selaginella moellendorffii]
 gi|300138284|gb|EFJ05058.1| hypothetical protein SELMODRAFT_236855 [Selaginella moellendorffii]
          Length = 451

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ NALG+ +D   S+G G      + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 66  ATLGRIFNALGEAVDDLGSVGAG--KKPPIHRTAPAFTQLDTKLSIFETGIKVVDLLAPY 123

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 124 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 183

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R  A LTA T+AEY   S   +VLL +D+I R   + 
Sbjct: 184 NAQNISESKVALVYGQMNEPPGARMRAGLTASTMAEYSRDSNKQDVLLFIDNIPRSVQAG 243

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A G+  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 244 SEVSALLGRMPPAVGHQPTLGTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPAPA 301

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R++E
Sbjct: 302 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTTLQPRIVGEQHYRTAQGVKQTLQRYKE 361

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 362 PQDITAILG 370


>gi|149384553|gb|ABR25099.1| ATP synthase beta chain [Elaphoglossum lechlerianum]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLLGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|149798709|gb|ABR32045.1| ATP synthase beta chain [Ochropteris pallens]
 gi|149798739|gb|ABR32060.1| ATP synthase beta chain [Pteris tremula]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQKISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|113910932|gb|ABI48198.1| ATPase beta subunit [Pteris ensiformis]
          Length = 457

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P  
Sbjct: 69  LGRIFNVLGEPVD---NLGPVHNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 184

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 185 NEQKISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDINKQDVLLFIDNIFRFVQAG 244

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 245 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 302

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 303 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 361

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 362 ELQDIIAILG 371


>gi|14718226|gb|AAK72851.1| ATP synthase beta subunit [Smilax glauca]
          Length = 491

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGDPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQXRIVGEEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|66276267|gb|AAY44148.1| ATP synthase beta subunit [Coriaria ruscifolia]
          Length = 473

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P D   +LG  D   +  I    P  +        F+TG +V+D+  
Sbjct: 80  GATLGRIFNVLGEPXD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGXKVVDLLA 136

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIXELINNIAKAHGGVSVFGGVGERTREGNDLYMXMKESG 196

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 197 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 374

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 375 KELQDIIAILG 385


>gi|218676675|ref|YP_002395494.1| ATP synthase subunit A [Vibrio splendidus LGP32]
 gi|218324943|emb|CAV26762.1| ATP synthase subunit A [Vibrio splendidus LGP32]
          Length = 513

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 165/348 (47%), Gaps = 32/348 (9%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           + +NLD   +  V +G   ++S G  V   GR    P      GRV+N LG+PIDG    
Sbjct: 62  LALNLDTHSVGAVVMGPYTDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPIDG---- 117

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG +S + +  V    P  + R+ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 118 -KGPVSCDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQTGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPIL 230
            L   ++  + D   K +   +G++   +   +   ED+  D LK ++VVVA++ ES  L
Sbjct: 177 ALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEDH--DALKNTIVVVASASESAAL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF   
Sbjct: 235 QYLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLH 294

Query: 291 PRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            RLLER              G  + + G++TA+  +     + +  +  +V SI DG + 
Sbjct: 295 SRLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVF 354

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   L   G  P VDP  SVSR+   A     KKL   +   + ++ E
Sbjct: 355 LQTQLFNSGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQYRE 402


>gi|42558348|gb|AAS19883.1| ATP synthase beta chain [Grammitis knutsfordiana]
          Length = 422

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 157/307 (51%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 75  GRIFNVLGEPVDNLGPVQSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 132

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           
Sbjct: 133 GKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 192

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 193 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 252

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   +  
Sbjct: 253 SALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATTS 310

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 311 AHLDATAVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 369

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 370 DIIAILG 376


>gi|13236700|gb|AAK14655.1| ATP synthase beta subunit [Chelyocarpus repens]
          Length = 498

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 219 SGVINEKNIAESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 278

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 336

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 337 PAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 396

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 397 RYKELQDIIAILG 409


>gi|224830578|gb|ACN66384.1| ATP synthase beta chain [Stephania japonica]
          Length = 401

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 22/307 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 392 YKELQDI 398


>gi|149798727|gb|ABR32054.1| ATP synthase beta chain [Pteris arborea]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQKISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|149798663|gb|ABR32022.1| ATP synthase beta chain [Astrolepis sinuata]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|34763522|ref|ZP_00144462.1| ATP synthase beta chain [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|237742815|ref|ZP_04573296.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13]
 gi|256846139|ref|ZP_05551597.1| ATP synthase archaeal, B subunit [Fusobacterium sp. 3_1_36A2]
 gi|294784731|ref|ZP_06750019.1| V-type sodium ATPase, B subunit [Fusobacterium sp. 3_1_27]
 gi|27886805|gb|EAA23938.1| ATP synthase beta chain [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|229430463|gb|EEO40675.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13]
 gi|256719698|gb|EEU33253.1| ATP synthase archaeal, B subunit [Fusobacterium sp. 3_1_36A2]
 gi|294486445|gb|EFG33807.1| V-type sodium ATPase, B subunit [Fusobacterium sp. 3_1_27]
          Length = 458

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFAAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|332146781|dbj|BAK19938.1| ApNa+ATPase alpha subunit [Aphanothece halophytica]
          Length = 514

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 165/340 (48%), Gaps = 21/340 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           LG    ++ + + +  +G  E +  GD V+  GR    P      GRV++ LG+P+D   
Sbjct: 67  LGIAFNLDAEEIGVILLGDSEGVQAGDKVYRLGRILDVPVGEALLGRVVDGLGRPLDN-- 124

Query: 118 SLGKGDLSMEIMSKVP---PA---MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
              KG++  E   ++P   PA   M R  VE   +TGI+VID   P+  GQR  +     
Sbjct: 125 ---KGEI--ETSERLPTERPARGIMERAPVEVPLQTGIKVIDALIPVGRGQRELIVGDRQ 179

Query: 172 IGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDES 227
           IGK+ +   ++  +       I   + +RG  V + I D L  +  +  +VVVVA  +  
Sbjct: 180 IGKTAIAVDTILNQKQHNVICIYCAIAQRGAAVAKVI-DRLRQHQAMDYTVVVVAPGESP 238

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P L+ + P  A +I EYF  +G +VL+I D +T+ A + RE++      P    YP  +F
Sbjct: 239 PGLKYITPYAATSIGEYFRDQGRDVLIIYDDLTQHAWAYRELSLLLRRPPGREAYPGDIF 298

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      E   G++TA+  V     N +  I  ++ SI DG I L+ +L ++
Sbjct: 299 YIHSRLLERATHLRDELGGGSLTALPLVETQAQNISAYIPTNLISITDGQIYLSPNLFQQ 358

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P VD   SVSR+  K      +++ S L     +F+E
Sbjct: 359 GILPAVDVGKSVSRVGGKTQLPAYRRVSSDLRLSYSQFQE 398


>gi|212697437|ref|ZP_03305565.1| hypothetical protein ANHYDRO_02007 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675629|gb|EEB35236.1| hypothetical protein ANHYDRO_02007 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 463

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 141/275 (51%), Gaps = 9/275 (3%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR  + LG+PID   S+   D   ++       ++R    +  +TG+  ID    
Sbjct: 82  SEDMIGRTFDGLGRPIDDGPSIIP-DEKRDVNGIAINPVSRDYPSEFIQTGVSTIDGLNT 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR-----SDCFD-KVIISLVGERGREVREFIEDYLG 211
           L  GQ++ +F+GSG+  +   +  AR     +D  D  V+ + +G    E + F +D+  
Sbjct: 141 LVRGQKLPIFSGSGLPHNKFAAQIARQAKVLNDSEDFAVVFAAIGITFEEAQFFRQDFEK 200

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
              L +SV+ +  +D+  I R   P  A+T AEY +  KG  VL+I+  +T +A ++RE+
Sbjct: 201 TGALDRSVMFINLADDPAIERLSTPKMALTAAEYLAFEKGMQVLVIMTDMTNYAEALREV 260

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +    E+P  RGYP  ++++L  L ER G  + + G IT +  + +  ++   PI D   
Sbjct: 261 SAARKEVPGRRGYPGYLYTDLATLYERAGKLKGKPGTITQIPILTMPENDITHPIPDLTG 320

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            I +G I+L+  L  +G  PPV  L S+SRL DK 
Sbjct: 321 YITEGQIILSNELYNQGVQPPVSILPSLSRLKDKG 355


>gi|13236798|gb|AAK14704.1| ATP synthase beta subunit [Beccariophoenix madagascariensis]
          Length = 494

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 217 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 335 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 394

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 395 KELQDIIAILG 405


>gi|63253275|dbj|BAD98430.1| beta subunit of ATP synthesis [Humata vestita]
          Length = 464

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|149798697|gb|ABR32039.1| ATP synthase beta chain [Jamesonia verticalis]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|149798685|gb|ABR32033.1| ATP synthase beta chain [Doryopteris sagittifolia]
          Length = 426

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 165/339 (48%), Gaps = 33/339 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLLIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYM--EMKESKV 153

Query: 220 -------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                        V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INVQNRSESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   EK  +    +     R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYETAQGVKQTSQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|37720995|gb|AAN32500.1| ATP synthase beta subunit [Ixiolirion tataricum]
          Length = 489

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +D+  I G
Sbjct: 399 KELQDMIAILG 409


>gi|75298751|sp|Q85V44|ATPB_EUCBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75328447|sp|Q85V45|ATPB_EUCMO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351893|emb|CAD48099.1| ATP synthase beta subunit [Eucomis montana]
 gi|30351895|emb|CAD48100.1| ATP synthase beta subunit [Eucomis bicolor]
          Length = 495

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEY     + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYIRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|323715502|gb|ADY04819.1| ATP synthase beta subunit [Loasa vulcanica]
          Length = 483

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PHRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 328 LVTTFAHLDVTTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 388 KELQDIIAILG 398


>gi|309776010|ref|ZP_07671002.1| V-type sodium ATP synthase, subunit B [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308916292|gb|EFP62040.1| V-type sodium ATP synthase, subunit B [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 480

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 143/274 (52%), Gaps = 24/274 (8%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N  G+PIDG   LG+   + S +I  +    ++R        TGI  ID  T L  
Sbjct: 87  GRTFNGSGQPIDG---LGEIYAEKSADINGQPLNPVSRVYPRNYINTGISSIDALTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK-------VIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+GSG+  + L     +     +       ++ + +G     V+  + DY   +
Sbjct: 144 GQKLPIFSGSGMPHNELAVQLVKQAKISEGDGKNFCIVFAAMG-----VKNDVADYFKRS 198

Query: 214 ------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                 ++K V+ +  S++  I R + P  A+T AEY + + D +VL+IL  IT +  ++
Sbjct: 199 FEEAGVMEKVVMFINLSNDPIIERTLTPRCALTAAEYLAYEQDMHVLVILTDITSYCEAL 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE +++ GE+P  +GYP  ++S+L  L ER G  +   G++T +  + +  D+   PI D
Sbjct: 259 REFSSSKGEIPGRKGYPGYLYSDLASLYERAGIVKGAGGSVTQIPILTMPNDDITHPIPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               I +G IVL+R+L + G YPPV  L S+SRL
Sbjct: 319 LTGYITEGQIVLDRNLNQMGVYPPVGVLPSLSRL 352


>gi|256545900|ref|ZP_05473256.1| V-type sodium ATPase, B subunit [Anaerococcus vaginalis ATCC 51170]
 gi|256398596|gb|EEU12217.1| V-type sodium ATPase, B subunit [Anaerococcus vaginalis ATCC 51170]
          Length = 463

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 144/278 (51%), Gaps = 15/278 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GR  + LG+PID   S+    K D++   ++ V    +R    +  +TG+  ID 
Sbjct: 82  SEDMIGRTFDGLGRPIDDGPSIIPEEKRDVNGVAINPV----SRDYPSEFIQTGVSTIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR-----SDCFD-KVIISLVGERGREVREFIED 208
              L  GQ++ +F+GSG+  +   +  AR     +D  D  V+ + +G    E + F +D
Sbjct: 138 LNTLVRGQKLPIFSGSGLPHNKFAAQIARQAKVLNDSEDFAVVFAAIGITFEEAQFFRQD 197

Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +     L +SV+ +  +D+  I R   P  A+T AEY +  KG  VL+I+  +T +A ++
Sbjct: 198 FEKTGALDRSVMFINLADDPAIERLSTPKMALTAAEYLAFEKGMQVLVIMTDMTNYAEAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  L ER G  + + G IT +  + +  ++   PI D
Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLATLYERAGKLKGKPGTITQIPILTMPENDITHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
               I +G I+L+  L  +G  PPV  L S+SRL DK 
Sbjct: 318 LTGYITEGQIILSNELYNQGVNPPVSILPSLSRLKDKG 355


>gi|149384699|gb|ABR25158.1| ATP synthase beta chain [Lepisorus longifolius]
          Length = 426

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSNATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|149384685|gb|ABR25151.1| ATP synthase beta chain [Belvisia spicata]
          Length = 426

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSNATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|156720265|dbj|BAF76781.1| beta subunit of ATP synthesis [Davallia chaerophylloides]
          Length = 464

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRIFNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|46360728|gb|AAS89145.1| ATP synthase beta subunit [Treubia lacunosoides]
          Length = 266

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 145/271 (53%), Gaps = 19/271 (7%)

Query: 101 WCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           + GR+ N LG+P+D   +LG  D ++   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 1   YLGRIFNVLGEPVD---NLGPVDAITTFPIHRSAPAFTQLDTKLAIFETGIKVVDLLAPY 57

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 58  RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVI 117

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 118 NEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 177

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           +  + LD   VL+R LA +G YP VDPL S 
Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDST 266


>gi|325848489|ref|ZP_08170149.1| ATP synthase ab C terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480717|gb|EGC83774.1| ATP synthase ab C terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 463

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 141/275 (51%), Gaps = 9/275 (3%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR  + LG+PID   S+   D   ++       ++R    +  +TG+  ID    
Sbjct: 82  SEDMIGRTFDGLGRPIDDGPSIIP-DEKRDVNGIAINPVSRDYPSEFIQTGVSTIDGLNT 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR-----SDCFD-KVIISLVGERGREVREFIEDYLG 211
           L  GQ++ +F+GSG+  +   +  AR     +D  D  V+ + +G    E + F +D+  
Sbjct: 141 LVRGQKLPIFSGSGLPHNKFAAQIARQAKVLNDSEDFAVVFAAIGITFEEAQFFRQDFEK 200

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
              L +SV+ +  +D+  I R   P  A+T AEY +  KG  VL+I+  +T +A ++RE+
Sbjct: 201 TGALDRSVMFINLADDPAIERLSTPKMALTAAEYLAFEKGMQVLVIMTDMTNYAEALREV 260

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +    E+P  RGYP  ++++L  L ER G  + + G IT +  + +  ++   PI D   
Sbjct: 261 SAARKEVPGRRGYPGYLYTDLATLYERAGKLKGKPGTITQIPILTMPENDITHPIPDLTG 320

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            I +G I+L+  L  +G  PPV  L S+SRL DK 
Sbjct: 321 YITEGQIILSNELYNQGVQPPVSILPSLSRLKDKG 355


>gi|313899238|ref|ZP_07832754.1| ATP synthase ab C terminal domain protein [Clostridium sp. HGF2]
 gi|312955918|gb|EFR37570.1| ATP synthase ab C terminal domain protein [Clostridium sp. HGF2]
          Length = 480

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 143/274 (52%), Gaps = 24/274 (8%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N  G+PIDG   LG+   + S +I  +    ++R        TGI  ID  T L  
Sbjct: 87  GRTFNGSGQPIDG---LGEIYAEKSADINGQPLNPVSRVYPRNYINTGISSIDALTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK-------VIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+GSG+  + L     +     +       ++ + +G     V+  + DY   +
Sbjct: 144 GQKLPIFSGSGMPHNELAVQLVKQAKISEGDGKNFCIVFAAMG-----VKNDVADYFKRS 198

Query: 214 ------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
                 ++K V+ +  S++  I R + P  A+T AEY + + D +VL+IL  IT +  ++
Sbjct: 199 FEEAGVMEKVVMFINLSNDPIIERTLTPRCALTAAEYLAYEQDMHVLVILTDITSYCEAL 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE +++ GE+P  +GYP  ++S+L  L ER G  +   G++T +  + +  D+   PI D
Sbjct: 259 REFSSSKGEIPGRKGYPGYLYSDLASLYERAGIVKGAGGSVTQIPILTMPNDDITHPIPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               I +G IVL+R+L + G YPPV  L S+SRL
Sbjct: 319 LTGYITEGQIVLDRNLNQMGVYPPVGVLPSLSRL 352


>gi|149384695|gb|ABR25156.1| ATP synthase beta chain [Goniophlebium formosanum]
          Length = 426

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|149798683|gb|ABR32032.1| ATP synthase beta chain [Doryopteris ludens]
          Length = 426

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 152/307 (49%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G
Sbjct: 39  LGRIFNVLGEPVDNLGPVRSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 97

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 98  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 157

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 158 NISESKVALVYGQMNEPPGARMRVGPTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 217

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 218 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 275

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 276 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 334

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 335 DIIAILG 341


>gi|56405329|sp|P29706|ATPA_PROMO RecName: Full=ATP synthase subunit alpha, sodium ion specific;
           AltName: Full=Na(+)-translocating ATPase subunit alpha
          Length = 500

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 23/324 (7%)

Query: 74  PVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM--- 129
           P G+ E    GD V   G+   +       GRV+N+LG+PIDG     KG+L  E M   
Sbjct: 79  PTGVKE----GDEVRATGQIAAVGAGEALLGRVVNSLGEPIDG-----KGELKTEKMMPL 129

Query: 130 -SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--LLSMFARSDC 186
             K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK+   L ++  + D 
Sbjct: 130 DRKAYGIISRKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAVALDAIINQKDT 189

Query: 187 FDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
             K I   +G++   V + +   ED     L+ ++VV AT+ ES  L+ MAP T V++ E
Sbjct: 190 GVKCIYVAIGQKRSTVAQIVKRLED--AGALEYTIVVAATASESAPLQYMAPYTGVSMGE 247

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  KG++VL++ D +++ A + RE++      P    +P  VF    RLLER      E
Sbjct: 248 YFMDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAFPGDVFYLHSRLLERAAKLSDE 307

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+ 
Sbjct: 308 IGAGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPAINAGISVSRVG 367

Query: 362 DKAWSADEKKLVSSLTHLIHRFEE 385
             A     K++ + +   + ++ E
Sbjct: 368 GAAQIKAMKQVAAQVKLELAQYNE 391


>gi|149384863|gb|ABR25240.1| ATP synthase beta chain [Diplazium wichurae]
          Length = 426

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNALGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|7706850|emb|CAB90046.1| ATP synthase beta subunit [Androcymbium ciliolatum]
          Length = 465

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 156/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 73  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 129

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 130 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 188

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 189 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 246

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 247 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 304

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 305 DPAPATTFAHLDATTVLSRGLAAKGIYPRVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 364

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 365 QRYKELQDIIAILG 378


>gi|330947259|gb|EGH47975.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 144

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/129 (47%), Positives = 81/129 (62%)

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +VL +GD+  DPIADS R
Sbjct: 1   AGARGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSAR 60

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            +LDGHIVL+R LAEEG YP +D  AS+SR+     S +          L  R+++TRD+
Sbjct: 61  GVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDL 120

Query: 390 RLIGGYRPG 398
             +G Y  G
Sbjct: 121 ISVGAYVAG 129


>gi|149384693|gb|ABR25155.1| ATP synthase beta chain [Enterosora parietina]
          Length = 426

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|149798735|gb|ABR32058.1| ATP synthase beta chain [Pteris propinqua]
          Length = 419

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 32  LGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLLIFETGIKVVDLLAPYR 88

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +           
Sbjct: 89  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 147

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
            ED + ++  K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 148 NEDKISES--KVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQ 205

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 206 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 263

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   +K  +    +   + R
Sbjct: 264 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKKHYETAQGVKQTLQR 322

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 323 YKELQDIIAILG 334


>gi|5758869|gb|AAD50843.1| ATP synthase beta subunit [Molineria capitulata]
          Length = 496

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|227485043|ref|ZP_03915359.1| H(+)-transporting two-sector ATPase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236876|gb|EEI86891.1| H(+)-transporting two-sector ATPase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 580

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 145/285 (50%), Gaps = 24/285 (8%)

Query: 134 PAMNRQRVEKGFK------TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           P  N + V+K         TG RV+D+F P+  G  + +  G G GK+ L    A+    
Sbjct: 189 PVRNPRPVKKALSLKNLLVTGQRVLDVFFPIAKGGTVAIPGGFGTGKTMLQHQLAQYSDV 248

Query: 188 DKVIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAV 239
           D ++    GERG E+ + +E++        G +L +  +++A +   P+  + A + T +
Sbjct: 249 DIIVYIGCGERGNEMTQVLEEFPDLIDPNTGKDLMQRTILIANTSNMPVAAREASIYTGI 308

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAEY+   G +V L+ DS +R+A ++REI+    E+P   GYP  + S L +  ER G 
Sbjct: 309 TIAEYYKDMGYDVALMADSTSRWAEALREISARLEEIPAEEGYPAYLASRLSKFYERAGY 368

Query: 300 SEK---EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            E     KG++T + +V   G + ++P+ ++ R  ++  + L+R LA    YP ++ L S
Sbjct: 369 FENLNGTKGSVTLIGAVSPSGGDFSEPVTEATRRSVNVFLGLDRKLAYSRHYPAINWLTS 428

Query: 357 VSRLADKA-------WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            +   +K        +++D   + + L +++   EE + I ++ G
Sbjct: 429 YTNYLEKMQDYYKEHYNSDIISIRNKLMNVLISEEEVKSIMMLVG 473


>gi|20269442|gb|AAM17948.1| ATP synthase beta subunit [Symplocos sp. Chung and Anderberg 1351]
          Length = 359

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 20/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           R+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  P   G
Sbjct: 53  RIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRG 109

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 110 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQ 169

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 170 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 229

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 230 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 287

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 288 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAPRVKQTLQRYKELQD 347

Query: 389 IRLIGG 394
           I  I G
Sbjct: 348 IIAILG 353


>gi|332800010|ref|YP_004461509.1| V-type ATP synthase beta chain [Tepidanaerobacter sp. Re1]
 gi|332697745|gb|AEE92202.1| V-type ATP synthase beta chain [Tepidanaerobacter sp. Re1]
          Length = 460

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 174/351 (49%), Gaps = 18/351 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116
           GQV+ I+ D  +V +     G  I+   + F     ++  S    GRV +  G+P D G 
Sbjct: 42  GQVLEIDGDKALVQLFEGSTGLNINDCKIRFLGKSIQLGVSIDMLGRVFDGSGRPKDNGP 101

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + +  L ++  S + PA  R    +  +TGI  ID    L  GQ++ +F+GSG+  + 
Sbjct: 102 KIIPEKRLDID-GSPINPAA-RDYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPHAQ 159

Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           L +  AR      ++    V+ + +G    E   FI D+     + +SV+ +  +++  I
Sbjct: 160 LAAQIARQAKVLGTESKFAVVFAAMGITFEEADYFISDFRKTGAIDRSVLFMNLANDPAI 219

Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R   P  A+T AE+ + + D +VL+IL  +T +  ++RE++    E+P  RGYP  +++
Sbjct: 220 ERISTPRMALTCAEFLAFEKDMHVLVILTDMTNYCEALREVSAARKEVPGRRGYPGYLYT 279

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L  + ER G    +KG+IT +  + +  D+   PI D    I +G ++L+R L   G  
Sbjct: 280 DLSTIYERAGRLRGKKGSITQIPILTMPEDDKTHPIPDLTGYITEGQVILSRELYTRGIM 339

Query: 349 PPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           PP+D L S+SRL DK         D    ++ L     R +E +++ +I G
Sbjct: 340 PPIDVLPSLSRLKDKGIGEGKTREDHADTMNQLFAAYARGKEAKELAVILG 390


>gi|296399237|gb|ADH10412.1| ATP synthase CF1 beta subunit [Selaginella moellendorffii]
          Length = 488

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ NALG+ +D   S+G G      + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 103 ATLGRIFNALGEAVDDLGSVGAG--KKPPIHRTAPAFTQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 220

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R  A LTA T+AEY   S   +VLL +D+I R   + 
Sbjct: 221 NAQNISESKVALVYGQMNEPPGARMRAGLTASTMAEYSRDSNKQDVLLFIDNIPRSVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A G+  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPPAVGHQPTLGTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTTLQPRIVGEQHYRTAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 PQDITAILG 407


>gi|237739538|ref|ZP_04570019.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31]
 gi|229423146|gb|EEO38193.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31]
          Length = 458

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 158/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+   +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFGAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|21667304|gb|AAM74019.1| ATP synthase beta chain [Grammitis bryophila]
          Length = 422

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVTSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|255961312|ref|YP_003097494.1| ATP synthase CF1 beta chain [Selaginella moellendorffii]
 gi|254941484|gb|ACT88999.1| ATP synthase CF1 beta chain [Selaginella moellendorffii]
          Length = 488

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ NALG+ +D   S+G G      + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 103 ATLGRIFNALGEAVDDLGSVGAG--KKPPIHRTAPAFTQLDTKLSIFETGIKVVDLLAPY 160

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 220

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R  A LTA T+AEY   S   +VLL +D+I R   + 
Sbjct: 221 NAQNISESKVALVYGQMNEPPGARMRAGLTASTMAEYSRDSNKQDVLLFIDNIPRSVQAG 280

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A G+  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 281 SEVSALLGRMPPAVGHQPTLGTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPAPA 338

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +   + R++E
Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTTLQPRIVGEQHYRTAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 PQDITAILG 407


>gi|159232192|emb|CAJ80611.1| ATP synthase beta subunit [Schizanthus hookeri]
 gi|159232194|emb|CAJ80612.1| ATP synthase beta subunit [Schizanthus grahamii]
          Length = 336

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|149384709|gb|ABR25163.1| ATP synthase beta chain [Neocheiropteris palmatopedata]
          Length = 418

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 159/315 (50%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVRSNATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 325 LQDIIAI----PGLD 335


>gi|63253211|dbj|BAD98382.1| beta subunit of ATP synthesis [Davallia mariesii]
 gi|63253219|dbj|BAD98388.1| beta subunit of ATP synthesis [Davallia mariesii var. stenolepis]
          Length = 464

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 166/335 (49%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +         +
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEE 223

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|32815639|gb|AAP88216.1| ATP synthase beta subunit [Ostrya virginiana]
          Length = 457

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 78  GATLGRIFNVLGEPVDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 136

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 137 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 196

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 197 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNERDVLLFIDNIFRFVQAG 256

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT + +V V  D+  DP   
Sbjct: 257 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKSGSITFIQAVYVPADDLTDPAPA 314

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 315 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 374

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 375 LQDIIAILG 383


>gi|63253175|dbj|BAD98355.1| beta subunit of ATP synthesis [Davallia corniculata]
          Length = 464

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|63253163|dbj|BAD98346.1| beta subunit of ATP synthesis [Davallodes borneense]
          Length = 464

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|14718179|gb|AAK72828.1| ATP synthase beta subunit [Photinia x fraseri]
          Length = 479

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 94  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+    G   RE  + Y+       
Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFXGVGERTREGNDLYMEMKESGV 210

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL + +I RF  +
Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIXNIFRFVQA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 388

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 389 ELQDIIAILG 398


>gi|7708195|emb|CAB90034.1| ATP synthase beta subunit [Clethra arborea]
          Length = 484

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|154499963|ref|ZP_02038001.1| hypothetical protein BACCAP_03620 [Bacteroides capillosus ATCC
           29799]
 gi|150271561|gb|EDM98818.1| hypothetical protein BACCAP_03620 [Bacteroides capillosus ATCC
           29799]
          Length = 475

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 172/347 (49%), Gaps = 21/347 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117
           G+VI I+ D   +      + ISL +   H+ G+   I+ S    GR+ +  G+PIDG  
Sbjct: 42  GRVITIDGDKAILQVFEGTKGISLENARTHFTGKPMDIALSHEMLGRIFDGAGRPIDG-- 99

Query: 118 SLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            LG+   +    I       ++RQ       TGI  ID  + L  GQ++ +F+G+G+  +
Sbjct: 100 -LGEIYPEQRRNINGSAINPVSRQYPRSCIYTGISAIDGCSTLIRGQKLPIFSGAGMKHN 158

Query: 176 TLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPI 229
            L +   R       D    ++ + +G +      F  ++      + VV+       PI
Sbjct: 159 ELAAQIVRQARVGDQDGEFAIVFAAMGVKNDTAEFFRRNFEEAGALQRVVMFMNLASDPI 218

Query: 230 L-RKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           + R + P  A+T AEY +   G +VL+I+  +T +  ++RE +++ GE+P  +G+P+ ++
Sbjct: 219 IERILTPRCALTAAEYLAFDLGYHVLVIMTDMTSYCEAVREFSSSKGEIPSRKGFPSYLY 278

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           S+L  L ER G  +   G++T V  + +  D+   PI D    I +G IVLNR + ++G 
Sbjct: 279 SDLASLYERAGMIKGRPGSVTQVPVLTMPNDDITHPIPDLTGYITEGQIVLNRDMDQKGV 338

Query: 348 YPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           YPP+  L S+SRL      K ++ D+   VS+   L   + + +D R
Sbjct: 339 YPPISILPSLSRLMKDGIGKGFTRDDHPDVSN--QLFASYSKVQDAR 383


>gi|8517623|emb|CAB94372.1| ATP synthase beta subunit [Ixiolirion tataricum]
          Length = 489

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 218 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +D+  I G
Sbjct: 396 KELQDMIAILG 406


>gi|118917372|dbj|BAF40485.1| ATP synthase beta subunit [Adenolinum lewisii]
          Length = 489

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+ ID    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEAID---DLGPVDTQTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE     +E  E 
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 212 GVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPEIVGEEHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 390 YKELQDIIAILG 401


>gi|99640608|emb|CAJ45095.1| putative beta subunit of chloroplast ATP synthase [Metaxya
           rostrata]
          Length = 493

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 31/337 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LGKP+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGKPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +  
Sbjct: 163 GGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 221

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLSFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD    L+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TFAHLDATTALSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 399 LQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|323148913|ref|YP_004222468.1| ATP synthase CF1 beta subunit [Smilax china]
 gi|308742604|gb|ADO33455.1| ATP synthase CF1 beta subunit [Smilax china]
          Length = 498

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSSPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|58081514|gb|AAW65232.1| AtpB [Pellia endiviifolia]
          Length = 382

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 158/307 (51%), Gaps = 22/307 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           ++ N LG+P+D   +LG  D +    + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 4   KIFNVLGEPVD---NLGPVDANTTFPIHRCAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 60

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 61  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQ 120

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 121 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 180

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 181 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 238

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDP  S S +  + W   E+  +    +   + R++E +
Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 297

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 298 DIIAILG 304


>gi|63253251|dbj|BAD98412.1| beta subunit of ATP synthesis [Humata banksii]
 gi|63253255|dbj|BAD98415.1| beta subunit of ATP synthesis [Humata melanophlebia]
 gi|63253259|dbj|BAD98418.1| beta subunit of ATP synthesis [Humata parvula]
 gi|63253263|dbj|BAD98421.1| beta subunit of ATP synthesis [Humata aff. parvula CT1055]
          Length = 464

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|224830522|gb|ACN66356.1| ATP synthase beta chain [Coscinium fenestratum]
          Length = 489

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGAPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|149384535|gb|ABR25090.1| ATP synthase beta chain [Elaphoglossum crassifolium]
          Length = 414

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 27  LGRIFNVLGEPVD---NLGPVRSSVTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 83

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 84  RGGKIGLLGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 143

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 144 EENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 203

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 204 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 261

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++E
Sbjct: 262 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYKE 320

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 321 LQDIIAILG 329


>gi|149798731|gb|ABR32056.1| ATP synthase beta chain [Pteris cretica]
          Length = 426

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQNSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQKISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|63253287|dbj|BAD98439.1| beta subunit of ATP synthesis [Scyphularia triphylla]
          Length = 464

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           DI  I    PG+D + +   + V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRQTVARARKIERFLSQ 431


>gi|149798655|gb|ABR32018.1| ATP synthase beta chain [Anetium citrifolium]
          Length = 426

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L++      A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVT 154

Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  N+ +S V  +    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALIYGQMNEPPGARMRVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|118603007|ref|YP_904222.1| ATP synthase F1, alpha subunit [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|158512583|sp|A1AXU4|ATPA_RUTMC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118567946|gb|ABL02751.1| ATP synthase F1 subcomplex alpha subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 513

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 168/345 (48%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +G+   IS GD+V    R    P      GRV+N LGK IDG D +
Sbjct: 62  MALNLEQNSVGAVILGDYLHISEGDVVKCTNRLVEVPVGEAMLGRVVNPLGKAIDGKDDI 121

Query: 120 G-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +G   +EIM+  P  +NR+ V++  +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 122 DVQGARPLEIMA--PGVINRKSVDQPIQTGIKAIDAMVPVGRGQRELIIGDRQTGKTAVA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   + +   +G++   V   +   E+Y    L+ +++V A +  +P L+ +
Sbjct: 180 IDTIINQKDSGIRCVYVAIGQKDSSVAAVVRKLEEY--GALENTIIVTAGAASAPALQYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+AEYF  +G++ L++ D +T+ A + RE++      P    YP  VF    RL
Sbjct: 238 APYAGCTMAEYFRDRGEDALIVYDDLTKQAWAYREVSLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +   G + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNAEYVEKMTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P ++   SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNAGIRPAINAGLSVSRVGGSAQTNIIKKLGGGIRLDLAQYRE 402


>gi|113910936|gb|ABI48200.1| ATPase beta subunit [Vittaria lineata]
          Length = 436

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 48  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 104

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 105 RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVTN 164

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 165 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 224

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 225 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 282

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 283 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 341

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 342 LQDIIAILG 350


>gi|13236708|gb|AAK14659.1| ATP synthase beta subunit [Trithrinax campestris]
          Length = 497

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGDPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|328681585|gb|AEB32865.1| ATP synthase beta subunit [Pseudocephalozia lepidozioides]
          Length = 380

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTNEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++  SG 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALSGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|312285249|gb|ADQ64366.1| ATP synthase beta subunit [Pachygone valida]
          Length = 468

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDPTTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|312285177|gb|ADQ64330.1| ATP synthase beta subunit [Abuta rufescens]
          Length = 469

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GVTLGRIFNVLGEPID---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +       +    +     R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKXHYETAQRVKQTSQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|17224721|gb|AAL37082.1| ATP synthase beta subunit [Dioscorea sylvatica]
          Length = 477

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R     TA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEKNIAESKVALVYGQMNEPPGARMRVGWTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|113910896|gb|ABI48180.1| ATPase beta subunit [Anomodon attenuatus]
          Length = 465

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 83  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAP 139

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEY       +VLL +D+I RF  +
Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQA 259

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|63253267|dbj|BAD98424.1| beta subunit of ATP synthesis [Humata polypodioides]
 gi|63253271|dbj|BAD98427.1| beta subunit of ATP synthesis [Humata aff. polypodioides CT1052]
          Length = 464

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|13236810|gb|AAK14710.1| ATP synthase beta subunit [Phytelephas aequatorialis]
          Length = 498

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +    +TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSISETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +  G 
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKGS 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R
Sbjct: 338 APATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|294783400|ref|ZP_06748724.1| V-type sodium ATPase, B subunit [Fusobacterium sp. 1_1_41FAA]
 gi|294480278|gb|EFG28055.1| V-type sodium ATPase, B subunit [Fusobacterium sp. 1_1_41FAA]
          Length = 458

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 158/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+   +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDAKFAVVFGAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|206901220|ref|YP_002251668.1| ATP synthase F1, alpha subunit [Dictyoglomus thermophilum H-6-12]
 gi|226739873|sp|B5YBQ0|ATPA_DICT6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|206740323|gb|ACI19381.1| ATP synthase F1, alpha subunit [Dictyoglomus thermophilum H-6-12]
          Length = 510

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 192/409 (46%), Gaps = 14/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           GY+ S+      V+ L+    +G+ V+ +   S   G V+ +  D V +   G  E +  
Sbjct: 30  GYVKSVGDGVAQVSLLNA-AFVGEIVIFE---SGIQGMVLSLKEDSVGVILFGRDEYVKE 85

Query: 84  GDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G++V+  G+    P+   + GRVI+ LG PIDG   L   +  + + ++ P   +R+ V+
Sbjct: 86  GEVVYSTGKILQVPTGSGFLGRVIDPLGNPIDGG-GLIFPEAYVPVDNEAPSIFDREPVK 144

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +   TGIR ID   P+ HGQR  +      GK+T+   ++ ++ +     I   + ++  
Sbjct: 145 EPLYTGIRAIDALIPIGHGQRELILGDRQTGKTTIAIDTIISQRNYGTICIYVAIAQKRT 204

Query: 201 EVREFIEDYLGDNLKKSVVVVAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   ++         + +V+AT  D+ P LR +AP+    + EYF  +G+ VL++ D +
Sbjct: 205 NIARIVQTLREYGALSNTIVIATFPDDPPALRYIAPMAGCAMGEYFMRQGERVLIVYDDL 264

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN--ITAVISVLVDG 317
           T+ A++ RE+A     +P    YP  +F     LLER     ++ G   +TA+       
Sbjct: 265 TKHANTYREVALLLRRVPGREAYPGDIFYLHSHLLERAAKLSRKLGGGALTALPIAETLA 324

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
              +  I  ++ SI DG I L+ +L   G  P ++   SVSR+   A     +++   L 
Sbjct: 325 GEISTYIPTNLISITDGQIYLDTALFNAGVRPAINVGLSVSRVGGSAQPKGMRQVAGRLR 384

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             + ++   R+  +   +   +D+   K + +   I + LKQ   ++ S
Sbjct: 385 LDLAQY---REYAMFLEFGTELDMATKKKIERGRRIEELLKQGAHEVQS 430


>gi|113910944|gb|ABI48204.1| ATPase beta subunit [Davallia fejeensis]
          Length = 449

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 163/336 (48%), Gaps = 27/336 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G
Sbjct: 69  LGRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 127

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +   
Sbjct: 128 GKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINE 186

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 187 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 246

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 247 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 304

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 305 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 363

Query: 387 RDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           +DI  I    PG+D + +   + V +   I  FL Q
Sbjct: 364 QDIIAI----PGLDELSEGDRQTVARARKIERFLSQ 395


>gi|254459061|ref|ZP_05072484.1| ATP synthase F1, alpha subunit [Campylobacterales bacterium GD 1]
 gi|207084332|gb|EDZ61621.1| ATP synthase F1, alpha subunit [Campylobacterales bacterium GD 1]
          Length = 505

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 179/377 (47%), Gaps = 15/377 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V+ +   +V +  +G+G E+  G  V   GR    P      GRV+NALG+PIDG   
Sbjct: 63  GLVMNLEESVVGVVILGLGTELKEGMSVKRLGRLLKVPVGDALLGRVVNALGEPIDGKGP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-- 176
           +   +    +  K P  M+R+ V +   TGI+ ID   P+  GQR  +      GK+T  
Sbjct: 123 IETTETRF-VEEKAPGIMDRKSVHEPLATGIKAIDALVPIGRGQRELIIGDRQTGKTTVA 181

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
           L ++  +       I   +G++   V + I   E++    L+ +++V +T+ E+  L+ +
Sbjct: 182 LDAIINQKGNGVICIYVAIGQKESTVAQIIRRLEEH--GALEYTIIVSSTAAEAAALQFL 239

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    RL
Sbjct: 240 APYTGVTMGEYFRDNARHGLIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYIHSRL 299

Query: 294 LERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      EK  G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 300 LERAAKVSDEKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNSGVRPAI 359

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  +L   + ++   R+++    +   +D      + +  
Sbjct: 360 NVGLSVSRVGGAAQIKATKQVAGTLRLDLAQY---RELQAFAQFASDLDETSRNQLERGQ 416

Query: 412 IIYDFLKQSP-SDLSSE 427
            + + LKQ P S LS+E
Sbjct: 417 RMVEVLKQGPFSPLSAE 433


>gi|149798645|gb|ABR32013.1| ATP synthase beta chain [Adiantum pedatum]
          Length = 394

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 156/316 (49%), Gaps = 28/316 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVRNSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 122

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 123 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKRDVLLFIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 241 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGGYRPGVD 400
           E +DI  I    PG+D
Sbjct: 300 ELQDIIAI----PGLD 311


>gi|42558386|gb|AAS19902.1| ATP synthase beta chain [Prosaptia alata]
          Length = 422

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|18072446|emb|CAC87647.1| ATP synthase beta chain [Azotobacter beijerinckii]
          Length = 348

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 133/253 (52%), Gaps = 7/253 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+++ LG PID    +G+ +    I    P   ++       +TGI+VID+  P   G 
Sbjct: 64  GRIMDVLGNPIDEAGPIGE-EERWTIHRAAPSYADQAGGNDLLETGIKVIDLVCPFAKGG 122

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218
           ++G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N L K  
Sbjct: 123 KVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVA 182

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P 
Sbjct: 183 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 242

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL
Sbjct: 243 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVL 300

Query: 339 NRSLAEEGRYPPV 351
           +R +A  G YP V
Sbjct: 301 SRDIASLGIYPAV 313


>gi|241912890|gb|ACS72123.1| AtpB [Prescottia sp. Hajeckt s.n.]
          Length = 489

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG   +  +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVIGEPVD---NLGPVHIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|148787943|gb|ABR12221.1| ATP synthase beta subunit [Anigozanthos flavidus]
          Length = 424

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 35  ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 91

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 92  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 151

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 152 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 211

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 329

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 330 ELQDIIAILG 339


>gi|167758714|ref|ZP_02430841.1| hypothetical protein CLOSCI_01056 [Clostridium scindens ATCC 35704]
 gi|167663910|gb|EDS08040.1| hypothetical protein CLOSCI_01056 [Clostridium scindens ATCC 35704]
          Length = 462

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 178/362 (49%), Gaps = 25/362 (6%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +FVV    ++  +G+++ ++ D   I      E +SL +    L  H     +SP     
Sbjct: 31  EFVVE--GSTRKMGRIVELDEDKAIIQVFEGTENMSLTNTHTKLTGHPMEVAVSPD--ML 86

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161
           GR  N +G+PIDG   +   D     ++ +P    R+   + + +TGI  ID  T L  G
Sbjct: 87  GRTFNGIGEPIDGLGPITSTD--RRDVNGLPLNPVRREYPRNYIRTGISAIDGLTTLIRG 144

Query: 162 QRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERG--REVREFIEDYLGDN-L 214
           Q++ +F+G+G+    L +   +     D  +     + G  G   +V EF +    ++ +
Sbjct: 145 QKLPIFSGNGLPHDQLAAQIVKQASLGDNAEGEFAVVFGAMGVKHDVAEFFQKTFEESGV 204

Query: 215 KKSVVVVATSDESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
              V +       P++ ++  P  A+T+AEY + + + ++L+IL  +T FA ++RE++++
Sbjct: 205 SDHVCMFLNLANDPVVERLITPKVALTVAEYLAFECNMHILVILTDMTSFAEAMREVSSS 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE+P  +GYP  ++SEL  + ER G  E   G++T +  + +  D+   PI D    I 
Sbjct: 265 KGEIPSRKGYPGYLYSELATIYERAGIVEGANGSVTQLPILTMPNDDITHPIPDLTGYIT 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETR 387
           +G +VL+R+L  +  YPP+  L S+SRL      +     D + L + L     +  E R
Sbjct: 325 EGQVVLDRNLHGQAIYPPISILPSLSRLMKDGIGEGYTREDHQDLANQLFSAYAKVGEAR 384

Query: 388 DI 389
           ++
Sbjct: 385 NL 386


>gi|156622715|dbj|BAF76338.1| ATP synthase beta subunit [Acorus gramineus]
          Length = 487

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 26/318 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E 
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + +  K    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 212 GVINEEKIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 271

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++     +P A GY  ++ +E+  L ERI  +  ++G+IT++ +  V  D+  DP
Sbjct: 272 QAGSEVSALLXRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAXYVPADDLTDP 329

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 389

Query: 383 FEETRDIRLIGGYRPGVD 400
           ++E +DI +I    PG+D
Sbjct: 390 YKELQDIIVI----PGLD 403


>gi|149384579|gb|ABR25112.1| ATP synthase beta chain [Lastreopsis glabella]
          Length = 426

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSVTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHHDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|42558346|gb|AAS19882.1| ATP synthase beta chain [Grammitis hookeri]
          Length = 422

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|149798749|gb|ABR32065.1| ATP synthase beta chain [Vittaria graminifolia]
          Length = 394

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVTN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|42558356|gb|AAS19887.1| ATP synthase beta chain [Grammitis poeppigiana]
          Length = 422

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|63253199|dbj|BAD98373.1| beta subunit of ATP synthesis [Davallia fejeensis]
 gi|63253231|dbj|BAD98397.1| beta subunit of ATP synthesis [Davallia pyxidata]
 gi|63253235|dbj|BAD98400.1| beta subunit of ATP synthesis [Davallia solida]
          Length = 464

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           DI  I    PG+D + +   + V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRQTVARARKIERFLSQ 431


>gi|149798733|gb|ABR32057.1| ATP synthase beta chain [Pteris multifida]
          Length = 426

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEEKISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|13236712|gb|AAK14661.1| ATP synthase beta subunit [Livistona speciosa]
          Length = 498

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TG +V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGXKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  S LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFSHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|7708280|emb|CAB90060.1| ATP synthase beta subunit [Dryas drummondii]
          Length = 484

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 41  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 101 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 157

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 217

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   +  E++
Sbjct: 218 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQAGSEVS 277

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 278 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 335

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 336 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 395

Query: 390 RLIGG 394
             I G
Sbjct: 396 IAILG 400


>gi|15828739|ref|NP_326099.1| F0F1 ATP synthase subunit alpha [Mycoplasma pulmonis UAB CTIP]
 gi|81620611|sp|Q98QU3|ATPA1_MYCPU RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|14089681|emb|CAC13441.1| ATP SYNTHASE ALPHA CHAIN [Mycoplasma pulmonis]
          Length = 528

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 163/338 (48%), Gaps = 23/338 (6%)

Query: 63  IRINLDIVYICPVGIGEEISL--GD---LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           + +NL+I YI    +G +  L  GD     F     ++ P     GRVINALG+PIDG  
Sbjct: 62  LTLNLEIDYIGVAILGNDTLLKEGDEAKRTFEVISIKVGPE--ILGRVINALGEPIDG-- 117

Query: 118 SLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
              KG++  EI  ++    P  M R+ V +   TGI  ID   P+  GQR  +      G
Sbjct: 118 ---KGEIDSEIHRQIFRVAPGVMARESVNEALSTGILAIDSMIPIGKGQRELIIGDRQTG 174

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPI 229
           K+ +   ++  +     K I   +G++   V + +   +  G     SVV  + S+ SP 
Sbjct: 175 KTAIAIDAIINQKGKNVKCIYVAIGQKNSTVAQIVRKLENHGAMEYTSVVSASASELSP- 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ +AP T VTIAE F   G +VL++ D +++ A + R ++      P    YP  VF  
Sbjct: 234 MQYLAPYTGVTIAEEFMETGQDVLIVYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             +LLER     KE   G+ITA+  +     + +  IA +V SI DG I    SL   G+
Sbjct: 294 HSQLLERAAKVNKENGGGSITALPIIETQQGDISAYIATNVISITDGQIFTKESLFNSGQ 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P +D   SVSR+   A  +  K++ SSL   + ++ E
Sbjct: 354 RPAIDVGFSVSRVGSSAQISAMKEVTSSLKLQLAQYNE 391


>gi|149384789|gb|ABR25203.1| ATP synthase beta chain [Thelypteris glandulosa]
          Length = 426

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVQSRTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|149384393|gb|ABR25019.1| ATP synthase beta chain [Asplenium forisiense]
          Length = 426

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|13236768|gb|AAK14689.1| ATP synthase beta subunit [Cyrtostachys renda]
          Length = 498

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    D +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALPMAEYFRDVNDQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|47459131|ref|YP_015993.1| F0F1 ATP synthase subunit beta [Mycoplasma mobile 163K]
 gi|47458460|gb|AAT27782.1| ATP synthase beta chain [Mycoplasma mobile 163K]
          Length = 473

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 21/327 (6%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I + D+V +     ++   +   G+V N LG+ ++  +   + + ++ I S +   +   
Sbjct: 62  IKINDIVTNKMEVLKVPVGSKIAGKVFNILGETLNAKEFEDEPN-TIPINSIIQREIEFN 120

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-SMFARSDCFDKVIISL---V 195
           +     +TGI+VID F PL  G ++G+F G+G+GK+ L+  +   S   D    S+    
Sbjct: 121 QNPILIETGIKVIDFFLPLIKGNKLGIFGGAGVGKTVLMKELIFNSLKVDDSTFSIFIGT 180

Query: 196 GERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVL 253
           GER RE  E + E    D LK S + ++  +E    R       +T AEY    +  NVL
Sbjct: 181 GERSREGEELYSELKEADLLKNSTMFISQMNEEAGARMNILPVGITAAEYMRDFEKRNVL 240

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           + +D+I R+  +  E++ + G+ P + GY  ++ SE+ ++ ER+  ++   G IT+  +V
Sbjct: 241 VFIDNIFRYIQAGNELSASLGKKPSSAGYQPTLISEVSKIQERLNRTQN--GAITSFQTV 298

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR------LADKAWSA 367
            +  D+  DP A ++ S LD  +VLNR +A  G YP  DPLAS S       +  K + A
Sbjct: 299 FLPSDDITDPAAVAIFSHLDSSLVLNREIAASGIYPAFDPLASSSNNIKPELIGKKHYEA 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGG 394
             K     +  ++ +++E  D+ LI G
Sbjct: 359 FIK-----VKSILQKYKELEDLVLILG 380


>gi|149384737|gb|ABR25177.1| ATP synthase beta chain [Serpocaulon triseriale]
          Length = 426

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVQSSATSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|332798518|ref|YP_004460017.1| V-type ATP synthase alpha chain [Tepidanaerobacter sp. Re1]
 gi|332696253|gb|AEE90710.1| V-type ATP synthase alpha chain [Tepidanaerobacter sp. Re1]
          Length = 601

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 121/236 (51%), Gaps = 11/236 (4%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P   R  +EK   TG RVID+F P+  G    +  G G GK+      A+    D ++  
Sbjct: 200 PVSRRMPIEKLLVTGQRVIDVFFPIAKGGTAAIPGGFGTGKTITQHQLAKWSDADIIVYV 259

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ E +ED+        G+ L    V++A +   P+  + A + T +TIAEYF
Sbjct: 260 GCGERGNEMTEVLEDFPKLKDPRTGNPLMDRTVLIANTSNMPVAAREASIYTGITIAEYF 319

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302
              G +V ++ DS +R+A ++REIA    E+P   GYP  + S L    ER G  E    
Sbjct: 320 RDMGYSVAIMADSTSRWAEALREIAGRLEEMPAEEGYPAYLASRLAAFYERAGYVENLNG 379

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +G++T + +V   G + ++P+  S + I+   + L++ LA    +P ++ ++S S
Sbjct: 380 TEGSVTIIGAVSPAGGDFSEPVTQSTKRIVGAFLALDKELAHARHFPSINWISSYS 435


>gi|330508338|ref|YP_004384766.1| V-type ATP synthase subunit B [Methanosaeta concilii GP-6]
 gi|328929146|gb|AEB68948.1| V-type ATP synthase subunit B [Methanosaeta concilii GP-6]
          Length = 461

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 170/345 (49%), Gaps = 18/345 (5%)

Query: 60  GQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           GQV+  + DIV I    G G       + F     ++  S    GRV++  GKP DG   
Sbjct: 41  GQVLDSSDDIVVIQIFEGTGGLSKDSAVSFTGDVIKMPLSPAIVGRVLSGSGKPRDGGPE 100

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +    L     + + PA +R++     +TGI  ID    L  GQ++ +F+G+G+  + L 
Sbjct: 101 IVPDVLRDIAGAAINPA-SREKPRAFIQTGISTIDGTNTLVRGQKLPIFSGAGLPHNDLA 159

Query: 179 SMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPIL 230
              AR       ++ F  VI   +G    E + F+ D+     L+++VV +  +D+  + 
Sbjct: 160 LQIARQAKALGEAESF-AVIFCAMGITNEEAQHFLADFERTGALERAVVFLNLADDPAVE 218

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R + P   +T AEY +   D +VL+I   +T +  S+R++     E+P  RGYP  ++++
Sbjct: 219 RILTPRLGLTTAEYLAFDLDMHVLIIYTDMTNYCESLRQMGAAREEVPGRRGYPGYMYTD 278

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L    ER G  + +KG+IT    + + GD+   PI D    I +G I+++R L  +G YP
Sbjct: 279 LACQYERAGIIKGKKGSITQFPILTMPGDDITHPIPDLSGYITEGQILISRELHRKGIYP 338

Query: 350 PVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           PVD   S+SRL +    K  + ++ + VS    L   + E  D+R
Sbjct: 339 PVDIRPSLSRLMNSGIGKGHTREDHRAVSD--QLYAYYAEGNDLR 381


>gi|63253279|dbj|BAD98433.1| beta subunit of ATP synthesis [Scyphularia pentaphylla]
 gi|63253283|dbj|BAD98436.1| beta subunit of ATP synthesis [Scyphularia pycnocarpa]
          Length = 464

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           DI  I    PG+D + +   + V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRQTVARARKIERFLSQ 431


>gi|29726126|gb|AAD00590.2| ATP synthase beta subunit [Stylophorum diphyllum]
          Length = 496

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +     +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPXHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGXXPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|21633373|gb|AAM52161.1| ATP synthase beta subunit [Cressa depressa]
          Length = 486

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---KLGPVDTKTTSPIHRSAPAFIXLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G    E  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTELIMELINNIAKAHGGVSVFGGXGERTPEGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|222478720|ref|YP_002564957.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Halorubrum lacusprofundi ATCC 49239]
 gi|254764987|sp|B9LS42|VATB_HALLT RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|222451622|gb|ACM55887.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 474

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 139/277 (50%), Gaps = 17/277 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+PID    +   +    + + + P  +R+  E+  +TG+  ID    L  G
Sbjct: 84  LGRVLDGSGRPIDDGPEIVPEERQDIVGAAINP-YSREYPEEFIETGVSAIDGMNTLVRG 142

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--------------KVIISLVGERGREVREFIE 207
           Q++ +F+ SG   S L    AR                    VI   +G    E  EF++
Sbjct: 143 QKLPIFSSSGQPHSQLAMQIARQASVPEEEEGGDDEEGSEFAVIFGAMGITAEEANEFMQ 202

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           D+     L++SVV +  +D+  + R + P   +T AEY + + D +VL+IL  +T +  +
Sbjct: 203 DFERTGALERSVVFMNLADDPAVERTVTPRMVLTTAEYLAFEKDYHVLVILTDMTNYCEA 262

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +REI     E+P  RGYP  ++++L +L ER G  +   G++T +  + + GD+   PI 
Sbjct: 263 LREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHPIP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           D    I +G I ++  L  +G  PP++ L S+SRL D
Sbjct: 323 DLTGYITEGQIYVDPDLNSQGLQPPINVLPSLSRLMD 359


>gi|63253207|dbj|BAD98379.1| beta subunit of ATP synthesis [Davallia griffithiana]
          Length = 464

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|16943749|emb|CAD10765.1| atp synthase, beta subunit [Heloniopsis orientalis]
          Length = 498

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|325280171|ref|YP_004252713.1| ATP synthase subunit beta [Odoribacter splanchnicus DSM 20712]
 gi|324311980|gb|ADY32533.1| ATP synthase subunit beta [Odoribacter splanchnicus DSM 20712]
          Length = 506

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 158/329 (48%), Gaps = 42/329 (12%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR++N  G  ID    LGK D +  + I  + P   +    ++   TGI+VID+  P   
Sbjct: 96  GRLLNVTGDAID---KLGKLDYTGTLSIHREPPRFEDLTTTQELLLTGIKVIDLLAPYSK 152

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL--- 210
           G +IG+F G+G+GK+ L+     +         + + VGER RE    +RE IE  +   
Sbjct: 153 GGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLREMIESGVVKY 212

Query: 211 GDNLK---------------------KSVVVVATSDESPILRKMAPLTAVTIAEYF---S 246
           G+  +                     ++ +V    +E P  R    L+ +T+AE F   +
Sbjct: 213 GERFQEEMNEGKWDVKSVDMEQVSQSQATLVFGQMNEPPGARLRVALSGLTVAESFRDSN 272

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G  +L  +D+I RF  +  E++   G +P A GY  ++ SE+ +L ERI  ++   G+
Sbjct: 273 EGGKEILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGKLQERIASTKY--GS 330

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R + E G YP VDPL S SR+ D    
Sbjct: 331 ITSVQAIYVPADDLTDPAPATTFNFLDATTVLSRKITELGIYPAVDPLESSSRILDPNIV 390

Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
            +E       +  L+  ++E +DI  I G
Sbjct: 391 GEEHYNTAQQVIELLQHYQELQDIIAILG 419


>gi|149384425|gb|ABR25035.1| ATP synthase beta chain [Asplenium scolopendrium]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|312285207|gb|ADQ64345.1| ATP synthase beta subunit [Chasmanthera welwitschii]
 gi|312285239|gb|ADQ64361.1| ATP synthase beta subunit [Leptoterantha mayumbensis]
 gi|312285243|gb|ADQ64363.1| ATP synthase beta subunit [Odontocarya tripetala]
 gi|312285245|gb|ADQ64364.1| ATP synthase beta subunit [Odontocarya truncata]
          Length = 469

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|149384825|gb|ABR25221.1| ATP synthase beta chain [Athyrium distentifolium]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQGSTTFPIHRSAPAFTQLDTKLSIFETGIKVADLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTTAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|156530089|gb|ABU75141.1| AtpB [Casimiroa edulis]
          Length = 479

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D  +M  + K  PA  +       F+TGI+V+D+  P
Sbjct: 86  ATLGRIFNVLGEAVD---NLGPVDTRTMSPIHKSAPAFIQLDTSLSIFETGIKVVDLLAP 142

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 143 NRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 202

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  +
Sbjct: 203 INEQNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQA 262

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 263 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 320

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 321 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 380

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 381 ELQDIIAILG 390


>gi|149798743|gb|ABR32062.1| ATP synthase beta chain [Pterozonium brevifrons]
          Length = 394

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVSNSTTFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|42558344|gb|AAS19881.1| ATP synthase beta chain [Grammitis forbesiana]
          Length = 422

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|21633311|gb|AAM52130.1| ATP synthase beta subunit [Merremia hastata]
          Length = 467

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P++   +LG  + + +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGQPVE---NLGPVETNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + YL      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEXKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               DN        V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 XIXEDNXXXXXXXXVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|149384743|gb|ABR25180.1| ATP synthase beta chain [Pityrogramma jamesonii]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|156720269|dbj|BAF76784.1| beta subunit of ATP synthesis [Davallia plumosa]
          Length = 442

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           DI  I    PG+D + +   + V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRQTVARARKIERFLSQ 431


>gi|312285281|gb|ADQ64382.1| ATP synthase beta subunit [Tinospora esiangkara]
 gi|312285283|gb|ADQ64383.1| ATP synthase beta subunit [Tinospora smilacina]
          Length = 469

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|63253187|dbj|BAD98364.1| beta subunit of ATP synthesis [Davallia divaricata]
 gi|63253203|dbj|BAD98376.1| beta subunit of ATP synthesis [Davallia formosana]
          Length = 464

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|4995187|emb|CAB44032.1| H(+)-transporting ATP synthase [Gonystylus macrophyllus]
          Length = 473

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 158/313 (50%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ + LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI V+D+  
Sbjct: 87  GATLGRIFHVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIXVVDLLA 143

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGARTREGNDLYM--EMKE 201

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 202 SGVINEKDLAESKVALVYGQMNEPPGARMTVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 261

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 262 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 319

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + 
Sbjct: 320 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 379

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 380 RYKELQDIIAILG 392


>gi|241912894|gb|ACS72125.1| AtpB [Galeoglossum tubulosum]
          Length = 489

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N +G+P+D   +LG  D+  +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVIGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
                +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 214 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E    + +      R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQMVKQTSQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|149384821|gb|ABR25219.1| ATP synthase beta chain [Thelypteris tylodes]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|149384419|gb|ABR25032.1| ATP synthase beta chain [Asplenium ritoense]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDAA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|149798705|gb|ABR32043.1| ATP synthase beta chain [Neurocallis praestantissima]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVHNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQKISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|99640613|emb|CAJ45110.1| putative beta subunit of chloroplast ATP synthase [Plagiogyria
           egenolfioides]
          Length = 409

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR  N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 30  GRTSNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 86

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG F G+G GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 87  GGKIGSFGGAGAGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 146

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V   ++E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 147 QNISESKVALVYGQTNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 206

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
            +  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 207 ASALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 264

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R  A +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 265 FAHLDATTVLSRGSAAKGTYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 323

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 324 QDIIAI----PGLD 333


>gi|63253167|dbj|BAD98349.1| beta subunit of ATP synthesis [Davallodes burbidgei]
 gi|63253171|dbj|BAD98352.1| beta subunit of ATP synthesis [Davallodes gymnocarpum]
 gi|63253215|dbj|BAD98385.1| beta subunit of ATP synthesis [Davallia aff. mariesii CT1018]
 gi|63253223|dbj|BAD98391.1| beta subunit of ATP synthesis [Davallia petelotii]
 gi|63253243|dbj|BAD98406.1| beta subunit of ATP synthesis [Davallia trichomanoides]
 gi|63253247|dbj|BAD98409.1| beta subunit of ATP synthesis [Davallia tyermannii]
          Length = 464

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 401 DIIAI----PGLD 409


>gi|42558302|gb|AAS19860.1| ATP synthase beta chain [Calymmodon gracilis]
          Length = 422

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|237743004|ref|ZP_04573485.1| ATP synthase subunit beta [Fusobacterium sp. 7_1]
 gi|229433564|gb|EEO43776.1| ATP synthase subunit beta [Fusobacterium sp. 7_1]
          Length = 458

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 158/315 (50%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+ I+ D   I        I+L D    F      +  S    GR+ + LG PID   
Sbjct: 42  GRVLEIDGDRAMIQLFEGSAGINLKDTTVRFLGKPLELGVSEDMIGRIFDGLGNPIDKGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I       ++R    +  +TGI  ID    L  GQ++ +F+GSG+  + +
Sbjct: 102 KIIP-EKRVDINGSPINPVSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHNNV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+   +G    E + FI+D+     + ++V+ +  +++  I 
Sbjct: 161 AAQIARQAKVLGDDVKFAVVFGAMGITFEEAQFFIDDFTKTGAIDRAVLFINLANDPAIE 220

Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY +  KG +VL+IL  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L ++ ER G  + + G+IT +  + +  D+   PI D    I +G I+L+R L + G  P
Sbjct: 281 LSQIYERAGKIKGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKSGIQP 340

Query: 350 PVDPLASVSRLADKA 364
           P+  + S+SRL DK 
Sbjct: 341 PIFVIPSLSRLKDKG 355


>gi|313204899|ref|YP_004043556.1| ATP synthase f1, beta subunit [Paludibacter propionicigenes WB4]
 gi|312444215|gb|ADQ80571.1| ATP synthase F1, beta subunit [Paludibacter propionicigenes WB4]
          Length = 506

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 156/326 (47%), Gaps = 44/326 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++N +G  IDG  +L K   +  I  + P   +    ++   TGI+VID+  P   G 
Sbjct: 94  GRLMNVIGDSIDGMKALDKKG-AYPIHREPPKFEDLTTSQEVLFTGIKVIDLLEPYSKGG 152

Query: 163 RIGVFAGSGIGKSTLLSMFARS-----DCFDKVIISLVGERGRE----VREFIEDYL--- 210
           +IG+F G+G+GK+ L+     +     + F   + + VGER RE    +RE IE  +   
Sbjct: 153 KIGLFGGAGVGKTVLIQELINNIAKGHNGFS--VFAGVGERTREGNDLLREMIESNVIRY 210

Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           G+  KKS+                     +V    +E P  R    L+ +T+AE F    
Sbjct: 211 GEEFKKSMEEGNWDLSKIDYSEVEKSQVTLVFGQMNEPPGARSSVALSGLTVAESFRDGD 270

Query: 250 DN-----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                  +L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + 
Sbjct: 271 GTGGGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGVMQERI--TSTKN 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  S LD   VL+R ++E G +P VDPL S SR+ D  
Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRKISELGIFPAVDPLESTSRILDPL 388

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDI 389
               D       +  ++ R +E +DI
Sbjct: 389 VVGEDHYNTAQRVKQILQRNKELQDI 414


>gi|159227422|emb|CAJ80502.1| ATP synthase beta subunit [Physalis sp. P119]
          Length = 336

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 GTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|8517431|emb|CAB94297.1| ATP synthase beta subunit [Ginkgo biloba]
          Length = 468

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 78  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLA 134

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESG 194

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEY     + +VLL +D+I RF  
Sbjct: 195 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNEQDVLLFIDNIFRFVQ 254

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R
Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQR 371

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 372 YKELQDIIAILG 383


>gi|46360653|gb|AAS89108.1| ATP synthase beta subunit [Austrofossombronia peruviana]
          Length = 381

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 156/305 (51%), Gaps = 24/305 (7%)

Query: 107 NALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + LG+P+D   +LG    D +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 6   HVLGEPVD---NLGPVSSDTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 62

Query: 165 GVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NL 214
           G+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+
Sbjct: 63  GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNI 121

Query: 215 KKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            KS V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++ 
Sbjct: 122 SKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSA 181

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 182 LLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAH 239

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDI 389
           LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI
Sbjct: 240 LDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKRTLQRYKELQDI 298

Query: 390 RLIGG 394
             I G
Sbjct: 299 IAILG 303


>gi|52788853|gb|AAU87396.1| ATP synthase beta chain [Metaxya rostrata]
          Length = 383

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 158/315 (50%), Gaps = 28/315 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LGKP+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGKPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +  
Sbjct: 65  GGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 123

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLSFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD    L+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTALSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 LQDIIAI----PGLD 311


>gi|312285235|gb|ADQ64359.1| ATP synthase beta subunit [Kolobopetalum leonense]
          Length = 466

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|170288892|ref|YP_001739130.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermotoga sp. RQ2]
 gi|33413312|emb|CAD67937.1| putative A-ATPase B-subunit [Thermotoga sp. RQ2]
 gi|170176395|gb|ACB09447.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermotoga sp. RQ2]
          Length = 460

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 21/313 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGK--GDLSMEIM-SKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GR ++ LG P    D LG+   + +M+I  S + PA  R+      +TGI  ID+
Sbjct: 83  SRDLLGRTLDGLGNP---RDDLGEIIPEKTMDINGSAINPAA-REYPRNFIQTGISSIDV 138

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----VIISLVGERGREVREFIEDY 209
              L  GQ++ +FAG+G+  + L    AR           V+   +G R ++   F+   
Sbjct: 139 LMTLIRGQKLPIFAGNGLPYNRLAVQIARQAKVTTGEEFAVVFGAIGLR-KDDASFVVKS 197

Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           L ++  +K  VVV+  +++S   R   P  A+TIAEY +   G +VL+IL+ +T +  ++
Sbjct: 198 LEESGAIKNMVVVLNLANDSVAERIATPRVALTIAEYLAFDLGMHVLVILNDMTNYCEAL 257

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++   GE+P  +GYP  ++S+L  + ER G    + G+IT +  + +  D+   PI D
Sbjct: 258 RELSNYRGEVPGRKGYPGYLYSDLASIYERAGIIRGKNGSITQIPILTMPNDDITHPIPD 317

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWS-ADEKKLVSSLTHLIH 381
               I +G IV++R+L   G YPP+D L+S+SRL      K ++  D   + S L     
Sbjct: 318 LTGYITEGQIVMSRNLFSRGIYPPLDVLSSLSRLMKDGIGKGYTREDHPDVASQLFSAYS 377

Query: 382 RFEETRDIRLIGG 394
           R  E + I  I G
Sbjct: 378 RVMEVKSIASIVG 390


>gi|46360679|gb|AAS89121.1| ATP synthase beta subunit [Hymenophyton leptopodum]
          Length = 376

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 158/305 (51%), Gaps = 24/305 (7%)

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRI 164
           N LG+P+D   +LG  D         P PA  +   +   F+TGI+V+D+  P   G +I
Sbjct: 1   NVLGEPVD---NLGPVDTGTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 57

Query: 165 GVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NL 214
           G+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+
Sbjct: 58  GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNI 116

Query: 215 KKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++ 
Sbjct: 117 SESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSA 176

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 177 LLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVHVPADDLTDPAPATTFAH 234

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDI 389
           LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI
Sbjct: 235 LDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDI 293

Query: 390 RLIGG 394
             I G
Sbjct: 294 IAILG 298


>gi|149384827|gb|ABR25222.1| ATP synthase beta chain [Athyrium filix-femina]
          Length = 425

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQGSTTFPIHRSAPAFTQLDTKLSIFETGIKVADLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTTAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|156118598|gb|ABU49841.1| ATPase beta subunit [Ginkgo biloba]
          Length = 499

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEY     + +VLL +D+I RF  
Sbjct: 219 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R
Sbjct: 337 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|8439276|emb|CAB90072.1| ATP synthase beta subunit [Euclea natalensis]
          Length = 476

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G    E  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTXEGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTGEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|332146774|dbj|BAK19931.1| ApNa+ATPase beta subunit [Aphanothece halophytica]
          Length = 470

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 151/294 (51%), Gaps = 9/294 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N  G+ IDG D +  GD    I    P         +  +TGI+VID+ +PL  G
Sbjct: 94  LGRVFNVFGETIDGKDPITGGDWR-SIHQSSPAIAQHTTSSEILETGIKVIDLLSPLERG 152

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217
            + G+F G+G+GK+ L++    +       ISL   +GER RE  E + E      LK +
Sbjct: 153 GKGGLFGGAGVGKTVLITELINNIVKQYQGISLFCGIGERVREAEEMYREMQEAGVLKNT 212

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
           V+V    +E P  R    L A+T+AEYF      +VLL++D+I RF  + +E++   G L
Sbjct: 213 VMVFGQMNEPPGARFRVGLAALTMAEYFQEDTKRDVLLLIDNIFRFIQAGQEVSGLLGRL 272

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P   GY  ++ +EL    ERI  +    G IT+V +V V  D+  DP A      L   I
Sbjct: 273 PSRVGYQPTLGTELADFEERI--ANTSSGAITSVQAVYVPADDFTDPAAVHTFGHLSTSI 330

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
           VL+R  A EG YP VDPL S S++ + +  +D   +   ++   +  +EE +DI
Sbjct: 331 VLSRKRASEGLYPAVDPLQSSSKMLNPSIVSDRHYQTAQAVRQTLANYEELKDI 384


>gi|113910778|gb|ABI48121.1| ATPase beta subunit [Lepidogyna hodgsoniae]
          Length = 468

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 158/321 (49%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D    LG  + S    + +  PA  +   +   F+TG
Sbjct: 70  GPLSVPVGEATLGRIFNVLGEPVD---ELGPVEASTIFPIHRSAPAFTQLDTKLSIFETG 126

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 127 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGND 185

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA T+AEYF      +VLL 
Sbjct: 186 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 246 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLV 373
             D+  DP   +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +  
Sbjct: 304 PADDLTDPAPATTFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETA 362

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 363 QGVKQTLQRYKELQDIIAILG 383


>gi|15988217|pdb|1FX0|B Chain B, Crystal Structure Of The Chloroplast F1-Atpase From
           Spinach
 gi|20150924|pdb|1KMH|B Chain B, Crystal Structure Of Spinach Chloroplast F1-Atpase
           Complexed With Tentoxin
 gi|343355|gb|AAA84626.1| ATPase beta subunit [Spinacia oleracea]
 gi|223530|prf||0811259A ATPase beta
          Length = 498

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +     S   + +  PA  +   +   F+TGI+V+++  P   
Sbjct: 107 LGRIFNVLGEPVDNLRPVDTRTTSP--IHRSAPAFTQLDTKLSIFETGIKVVNLLAPYRR 164

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 165 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE 224

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E
Sbjct: 225 QNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 284

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 285 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 342

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R++E +
Sbjct: 343 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRYKELQ 402

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 403 DIIAILG 409


>gi|88811295|ref|ZP_01126551.1| ATP synthase subunit A [Nitrococcus mobilis Nb-231]
 gi|88791834|gb|EAR22945.1| ATP synthase subunit A [Nitrococcus mobilis Nb-231]
          Length = 514

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 26/381 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + ++T     +  LSQ V  G+ +   G      G  + +  D V    +G  E I  
Sbjct: 30  GAVLTLTDGIARLHGLSQ-VMQGEMIEFPGAT---YGLALNLERDSVGAVILGDYEHIKE 85

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD+V   GR    P  +   GRV+NALG+PIDG   + + D +  I    P  ++RQ V 
Sbjct: 86  GDVVKCTGRIIEVPVGSGLLGRVVNALGQPIDGKGEI-EHDGTSPIEKVAPGVISRQSVS 144

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TG++ ID   P+  GQR  +      GK+ +   ++  + +   K I   VG++  
Sbjct: 145 QPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAIINQKNTGIKCIYVAVGQKAS 204

Query: 201 EVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            +   +   E++  D L  ++VV AT+ ES  ++ +AP    ++ EYF  +G++ L+I D
Sbjct: 205 SIAAVVRKLEEH--DALDHTIVVAATASESAAMQYIAPYAGCSMGEYFRDRGEDALIIFD 262

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE---RIGPSEKEK---------- 304
            +T+ A + R+++      P    YP  VF    RLLE   RI   E EK          
Sbjct: 263 DLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARINADEVEKLTKGKVKGRT 322

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR+   A
Sbjct: 323 GSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGIRPAINAGLSVSRVGGAA 382

Query: 365 WSADEKKLVSSLTHLIHRFEE 385
            +   KKL   +   + ++ E
Sbjct: 383 QTGIIKKLGGGVRLALAQYRE 403


>gi|224830592|gb|ACN66391.1| ATP synthase beta chain [Tinospora esiangkara]
          Length = 489

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|159227490|emb|CAJ80536.1| ATP synthase beta subunit [Physalis sp. P077]
          Length = 337

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 154/303 (50%), Gaps = 21/303 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVVVV--ATSDESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
               +N+ +S V +     +E P  R M   LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 156 VINEENIAESKVALLYGQMNEPPGARMMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 215

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 216 QAGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDP 273

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 274 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQR 333

Query: 383 FEE 385
           ++E
Sbjct: 334 YKE 336


>gi|149798689|gb|ABR32035.1| ATP synthase beta chain [Eriosorus cheilanthoides]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVCNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|149798653|gb|ABR32017.1| ATP synthase beta chain [Cheilanthes argentea]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|330957494|gb|EGH57754.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. maculicola str. ES4326]
          Length = 279

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 143/257 (55%), Gaps = 16/257 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +S++  +   + C      +GD   V +   S  L +++    D   +  +G  + I 
Sbjct: 26  GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSMLLAEIVGFTQDCTLLSALGAPDGIQ 83

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG-------KGDLSMEIMSKVPP 134
           +G  +   G   RI       G V++  G+P+ GD  LG       + D ++ +++   P
Sbjct: 84  VGAPIRPLGIAHRIGVDDSLLGSVLDGFGRPLLGD-CLGAFAGPDDRRD-TLPVIADALP 141

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIIS 193
              R R+ +   TG+R ID    L  GQR+G+FAG+G GK+TL++  AR+ DC D ++  
Sbjct: 142 PTQRPRITRALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFG 200

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGRE+REF++  L + L+ +SV+V ATSD S + R  A  TA  IAE F ++G  V
Sbjct: 201 LIGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKV 260

Query: 253 LLILDSITRFAHSIREI 269
           LL+LDS+TRFA + REI
Sbjct: 261 LLLLDSLTRFARAQREI 277


>gi|312285259|gb|ADQ64371.1| ATP synthase beta subunit [Rhigiocarya racemifera]
          Length = 468

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 196

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 197 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 256

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 257 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 315 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 374

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 375 YKELQDIIAILG 386


>gi|307697217|gb|ADN86063.1| ATP synthase CF1 beta subunit [Chasmanthium latifolium]
          Length = 498

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+++S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +    GY  ++  E+  L ERI  +  +KG+IT++  V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMXSXVGYQPTLSXEMGSLQERI--TSTKKGSITSIQVVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPTVDPLDSTSTMLQPRVVGNEHYETAQRVKETLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|224830548|gb|ACN66369.1| ATP synthase beta chain [Tinospora esiangkara]
          Length = 477

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|254425580|ref|ZP_05039297.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
 gi|196188003|gb|EDX82968.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
          Length = 528

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 165/345 (47%), Gaps = 23/345 (6%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I  NLD   V I  +  G  +S G  V   GR   +P      GRV++A G+P+DG   +
Sbjct: 86  IAFNLDKEEVGIVLLNNGSNLSAGCEVGRTGRVMDTPVGEGLLGRVLDATGQPLDGKGVV 145

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              +    I    P  M+R  V +  +TGI+VID   P+  GQR  +      GK+ +  
Sbjct: 146 AYAE-RRAIERPAPAIMDRASVSEPLQTGIKVIDALIPVGRGQRELILGDRQTGKTAIAI 204

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAP 235
            ++  + +     +   +G+R     + I D L D   + + +VVVA+ + +P L+ + P
Sbjct: 205 DTLLNQQEVI--CVYCAIGQRSSTTAKLIAD-LRDRGAIDRCIVVVASGESTPGLQYITP 261

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A T+AEYF  KG +VL++ D +T+ A + RE++      P    +P  +F    RLLE
Sbjct: 262 YAATTMAEYFMEKGQDVLIVYDDLTQHARAYRELSLLLKRPPGREAFPGDIFYLHARLLE 321

Query: 296 R-------IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           R       +G      G++TA+  +  +  N +  I  ++ SI DG I L+ SL ++G +
Sbjct: 322 RSTRLCEALG-----GGSLTALPILETESGNLSGYIPTNLVSITDGQIYLSPSLFQKGIF 376

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           P VD   SVSR+  +A     + +   L     +F+E  +    G
Sbjct: 377 PAVDVGISVSRVGGRAQLPAYRAVTGDLRLTYSQFQELENFARFG 421


>gi|119471629|ref|ZP_01614014.1| F0F1 ATP synthase subunit alpha [Alteromonadales bacterium TW-7]
 gi|119445408|gb|EAW26695.1| F0F1 ATP synthase subunit alpha [Alteromonadales bacterium TW-7]
          Length = 513

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I +NL+   I  V +G   +++ G  V+  GR    P  A   GRV+N LG PIDG  +L
Sbjct: 62  IALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGAGLLGRVVNTLGAPIDGKGAL 121

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                  E + K+ P  + RQ V++  +TG + ID   P+  GQR  V      GK+ L 
Sbjct: 122 DND--GFEPVEKIAPGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   VG++   +   +   E++    L  ++VVVA++ ES  L+ +
Sbjct: 180 IDAIINQKDTGVKCVYVAVGQKASTIANVVRKLEEH--GALANTIVVVASASESAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APFSGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +   G + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNADYVEKFTNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE 402


>gi|5758913|gb|AAD50887.1| ATP synthase beta subunit [Maianthemum racemosum]
          Length = 495

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+ EYF    + +VLL +D+I R   
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMGEYFRDVNEQDVLLFIDNIFRXVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|149798667|gb|ABR32024.1| ATP synthase beta chain [Cheilanthes alabamensis]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|37720939|gb|AAN32472.1| ATP synthase beta subunit [Butomus umbellatus]
          Length = 483

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG    D +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTDTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +          R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRXKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 391 KXLQDIIAILG 401


>gi|20269436|gb|AAM17945.1| ATP synthase beta subunit [Schima superba]
          Length = 479

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMXVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +  +     F+TGI+V+D+  P   G 
Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 166

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-----DN 213
           +IG+F G+G+GK+ L+    +  A++     V   +          ++E          N
Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGEXTXEGXDLYMEXXESGVINEQN 226

Query: 214 LKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S   VV    +E P  R    LTA+T+AEYF    + +VLL +D+  RF  +  E++
Sbjct: 227 IAESKVAVVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNXFRFVQAGSEVS 286

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404

Query: 390 RLIGG 394
             I G
Sbjct: 405 IAILG 409


>gi|310947812|gb|ADP50725.1| ATP synthase beta chain [Pteris tremula]
          Length = 370

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 22/302 (7%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL--SMFARSDCFDKVIISL-VGERGRE----VREFIEDYLGDNLK---- 215
           F G+G+GK+ L+  S+   +     V +S  VGER RE      E  E  + +  K    
Sbjct: 59  FGGAGVGKTVLIMESINNIAKAHGGVSVSCGVGERTREGNDLYMEMKESKVINEQKISES 118

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 295

Query: 393 GG 394
            G
Sbjct: 296 LG 297


>gi|312285273|gb|ADQ64378.1| ATP synthase beta subunit [Syntriandrium preussii]
          Length = 467

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 81  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 137

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 198 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 375

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 376 KELQDIIAILG 386


>gi|292491964|ref|YP_003527403.1| alternate F1F0 ATPase, F1 subunit alpha [Nitrosococcus halophilus
           Nc4]
 gi|291580559|gb|ADE15016.1| alternate F1F0 ATPase, F1 subunit alpha [Nitrosococcus halophilus
           Nc4]
          Length = 503

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 160/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           LG  I +  + + +  +G   E++ G  V   GR   +P      GRVI+  G+ +D   
Sbjct: 61  LGIAINLEPEEIGVALLGDSPELTAGAEVHATGRLTDAPVGKGLLGRVIDPTGRVLDDGG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +    I    P  M+R  V    +TG++ +D   P+  GQR  +      GK+T+
Sbjct: 121 PLQVSE-RRPIERDAPAIMDRAPVSVPLQTGLKAVDALIPIGRGQRELILGDRQTGKTTV 179

Query: 178 LSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKM 233
            ++    + +DK +I +   +G+RG  V   I +       + S+VVVA+ ++ P L+ +
Sbjct: 180 -AVDTILNQWDKEVICIYCAIGQRGTAVARVINELRSQGANRYSIVVVASGEDPPGLQFI 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            P  A T+AEYF  +G +VL++ D +TR A + RE++      P    YP  +F    RL
Sbjct: 239 TPYAATTMAEYFMEQGQDVLVVYDDLTRHARAYRELSLLLRRPPGREAYPGDIFYIHSRL 298

Query: 294 LERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     +EK  G+ITA+  V     + +  I  ++ SI DG I L+  L  +G  P V
Sbjct: 299 LERATHLRQEKGGGSITALPIVETQAQDISAYIPTNLISITDGQIYLSPELFHKGLMPAV 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D   SVSR+  K      + +   L     +FEE
Sbjct: 359 DVGKSVSRVGGKTQLPAHRAVAGDLRLSYTQFEE 392


>gi|5758858|gb|AAD50832.1| ATP synthase beta subunit [Calathea loeseneri]
          Length = 496

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    + +  PA  R   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIRLDTKLSIFETGIKVVDLLP 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L E  G +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQE--GITSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|149798707|gb|ABR32044.1| ATP synthase beta chain [Notholaena aschenborniana]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|89574011|gb|ABD77231.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Dasypus novemcinctus]
          Length = 293

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 16/256 (6%)

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203
           +D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      
Sbjct: 1   VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYH 59

Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
           E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I
Sbjct: 60  EMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 119

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+
Sbjct: 120 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 177

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  
Sbjct: 178 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQK 237

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 238 ILQDYKSLQDIIAILG 253


>gi|20269414|gb|AAM17934.1| ATP synthase beta subunit [Polyspora axillaris]
          Length = 482

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    L A+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLAALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R 
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRX 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|54020004|ref|YP_115568.1| F0F1 ATP synthase subunit alpha [Mycoplasma hyopneumoniae 232]
 gi|81603676|sp|Q601Z7|ATPA_MYCH2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|53987177|gb|AAV27378.1| ATP synthase alpha chain [Mycoplasma hyopneumoniae 232]
          Length = 507

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 156/325 (48%), Gaps = 13/325 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+NALG PIDG   L    L   I +  P  M+R+ V++G KTGI  ID   P+  G
Sbjct: 103 LGRVVNALGIPIDGKAEL-DNSLKSAIFTNAPSIMDRKSVDRGLKTGILAIDSLVPIGKG 161

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKS 217
           QR  +      GK+T+   ++  +       +   +G++   V + +   +  G     +
Sbjct: 162 QRELIIGDRQTGKTTIAIDAILNQKGKNVYCVYVAIGQKNSSVAQIVSLLEKKGAFEYTT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V++   S+ SP L+ +AP +   IAEY+ +K  +VL+I D +++ A + R ++      P
Sbjct: 222 VILAGASELSP-LQYLAPYSGAAIAEYWMNKKKDVLIIYDDLSKHAIAYRTLSLLLRRPP 280

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               +P  +F +   LLER      +K  G+ITA+  +     + +  I  +V SI DG 
Sbjct: 281 GREAFPGDIFYQHSYLLERSAQLSNDKGGGSITALPIIETQAGDISAYIPTNVISITDGQ 340

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG- 394
           I L  SL   G+ P +D   SVSR+   A +   K   SSL   + ++ E +     G  
Sbjct: 341 IFLRDSLFNSGQKPAIDIGLSVSRVGSAAQTNLMKWASSSLKLNLAQYNELKAFAQFGSD 400

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419
             P   LILD+       IY+ LKQ
Sbjct: 401 LGPSSQLILDRGNK----IYEILKQ 421


>gi|149384729|gb|ABR25173.1| ATP synthase beta chain [Pyrrosia serpens]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+  ++      A++     V   +  ER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + D  N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VIDEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|149798729|gb|ABR32055.1| ATP synthase beta chain [Pteris argyraea]
 gi|149798737|gb|ABR32059.1| ATP synthase beta chain [Pteris quadriaurita]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVHNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  K    K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQKISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|224830500|gb|ACN66345.1| ATP synthase beta chain [Chasmanthera welwitschii]
          Length = 470

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 207

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 208 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIIAILG 397


>gi|89574009|gb|ABD77230.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Loxodonta africana]
          Length = 312

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 16/256 (6%)

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203
           +D+  P   G +IG+F G+G+GK+ L+    +  A++     V    VGER RE      
Sbjct: 1   VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYH 59

Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259
           E IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I
Sbjct: 60  EMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 119

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+
Sbjct: 120 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 177

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378
             DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      E   V+  +  
Sbjct: 178 LTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQK 237

Query: 379 LIHRFEETRDIRLIGG 394
           ++  ++  +DI  I G
Sbjct: 238 ILQDYKSLQDIIAILG 253


>gi|6017804|gb|AAF01636.1| ATP synthase beta subunit [Hydrastis canadensis]
          Length = 496

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   + G  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NFGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G + G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKXGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 337 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|149384703|gb|ABR25160.1| ATP synthase beta chain [Microgramma bifrons]
          Length = 426

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|37721023|gb|AAN32514.1| ATP synthase beta subunit [Muscari comosum]
          Length = 494

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLX 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLXGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|17224733|gb|AAL37088.1| ATP synthase beta subunit [Dioscorea arachidna]
          Length = 478

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F  +G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGEAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|52788861|gb|AAU87400.1| ATP synthase beta chain [Schizaea dichotoma]
          Length = 383

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVNSSATFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPHR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMESTNNIAKAHGGVSVSGGVGERTREGNDLYM--EMKESKV 121

Query: 220 V----VATS---------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           +    VA S         +E P  R     TA+T+AEYF      +V   +D+I RF  +
Sbjct: 122 INEQNVAESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPSFIDNIFRFVQA 181

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 182 GSEVSASPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 239

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 240 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 298

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 299 KELQDIIAILG 309


>gi|325125457|gb|ADY84787.1| ATP synthase alpha subunit [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 503

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 164/355 (46%), Gaps = 20/355 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + + Q   S+++G +I           +G  ++I  GD V   GR    P      GR
Sbjct: 58  GAYGIAQNLESNDVGIII-----------LGKFDDIREGDRVKRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVV 220
            V      GK++L +         D + I + +G++   VR  +E    LG      VV 
Sbjct: 166 LVIGDRKTGKTSLAIDTILNQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVE 225

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              S+ +P+L  +AP + + + E F   G +VL++ D +++ A + RE++      P   
Sbjct: 226 AGPSEPAPMLY-IAPYSGIAMGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGRE 284

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            YP  VF    RLLER     KE   G++TA+  +  +  + +  I  +V SI DG I L
Sbjct: 285 AYPGDVFYLHSRLLERSAKLSKELGGGSLTALPVIQTEAGDISAYIPTNVISITDGQIFL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L   G  P +D  ASVSR+   A     KK+  +L   +  + E       G
Sbjct: 345 QSDLFFSGTRPAIDAGASVSRVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG 399


>gi|166033135|ref|ZP_02235964.1| hypothetical protein DORFOR_02857 [Dorea formicigenerans ATCC
           27755]
 gi|166027492|gb|EDR46249.1| hypothetical protein DORFOR_02857 [Dorea formicigenerans ATCC
           27755]
          Length = 461

 Score =  123 bits (309), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 18/327 (5%)

Query: 47  DFVV-HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGR-FRISPSACWCG 103
           +FVV H+ K    +G+++ +N D   I      E +SL +      GR   ++ S    G
Sbjct: 31  EFVVDHKTKK---MGRIVELNEDKAIIQVFEGTENMSLDNTHTRLMGRPMEVTVSPEMLG 87

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQ 162
           R  N +G+PID    L   D     ++ +P    R+   + + +TGI  ID  T L  GQ
Sbjct: 88  RTFNGIGQPIDDMGPLISED--KRDVNGLPLNPVRREYPRNYIQTGISAIDGLTTLIRGQ 145

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCF----DKVIISLVGERG--REVREFIEDYLGDN-LK 215
           ++ +F+G+G+    L +   +        D+    + G  G   +V +F      +N + 
Sbjct: 146 KLPIFSGNGLPHDQLAAQIVKQASLGGDSDEDFAIVFGAMGVKHDVADFFRKTFDENGVS 205

Query: 216 KSVVVVATSDESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273
             V +       P++ ++  P  A+T+AEY + + + ++L+IL  +T FA ++RE++++ 
Sbjct: 206 DHVCMFLNLANDPVVERLITPKVALTVAEYLAFECNMHILVILTDMTSFAEALREVSSSR 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE+P  +GYP  ++SEL  + ER G  E   G++T +  + +  D+   PI D    I +
Sbjct: 266 GEIPSRKGYPGYLYSELATIYERAGIVEGANGSVTQLPILTMPNDDITHPIPDLTGYITE 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRL 360
           G IVL+R+L  +  YPP++ L S+SRL
Sbjct: 326 GQIVLDRNLYGQSVYPPINVLPSLSRL 352


>gi|149798717|gb|ABR32049.1| ATP synthase beta chain [Pellaea truncata]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|149798715|gb|ABR32048.1| ATP synthase beta chain [Pellaea intermedia]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|63253159|dbj|BAD98343.1| beta subunit of ATP synthesis [Araiostegia yunnanensis]
          Length = 464

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 165/337 (48%), Gaps = 31/337 (9%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 163 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 221

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 399 LQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|224830552|gb|ACN66371.1| ATP synthase beta chain [Odontocarya tripetala]
          Length = 486

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 210

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 211 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 270

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 271 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 328

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 329 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 388

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 389 YKELQDIIAILG 400


>gi|224830594|gb|ACN66392.1| ATP synthase beta chain [Tinospora smilacina]
          Length = 471

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 386

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 387 KELQDIIAILG 397


>gi|149384475|gb|ABR25060.1| ATP synthase beta chain [Davallia griffithiana]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 163/338 (48%), Gaps = 27/338 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 37  TTLGRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 332 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|77920586|ref|YP_358401.1| F0F1 ATP synthase subunit alpha [Pelobacter carbinolicus DSM 2380]
 gi|115312232|sp|Q3A076|ATPA2_PELCD RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|77546669|gb|ABA90231.1| ATP synthase F1, alpha subunit [Pelobacter carbinolicus DSM 2380]
          Length = 522

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 176/392 (44%), Gaps = 12/392 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++  +TL    E++S  L VQ  G++  I      V  L    C        G     L
Sbjct: 12  LKEAFDTLDSALENFSPVLAVQHVGWVEYIGKGIARVGGLPGVRCEELLAFPGGL----L 67

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  +  + D V +   G    +  GD V   GR    P      GRV+N +G+ +DG   
Sbjct: 68  GLALDADEDQVGVVLFGDYTHLQAGDEVRRTGRVLDVPVGDGLIGRVVNPVGRCLDGGKP 127

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      + +    PP M+R  V +   TGI+VID   P+  GQR  +      GK+ + 
Sbjct: 128 VAF-QRQLPVERPAPPIMDRLPVTQPLMTGIKVIDALIPIGRGQRELILGDRQTGKTAIA 186

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
             ++  + D     I   +G+R   V   + +      L  ++VVVA  D  P L+ +AP
Sbjct: 187 IDAIINQRDQDVVCIYCAIGQRAASVAGVVTELRNCGALDYTIVVVAEGDAPPGLQYIAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A ++AE+F   G +VL++ D +TR A + REI+      P    +P  +F    RLLE
Sbjct: 247 YAATSMAEHFMEHGRDVLIVYDDLTRHARAYREISLLLRRPPGREAFPGDIFYVHSRLLE 306

Query: 296 RIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     + +  G++TA+  +  +  N +  I  ++ SI DG I L+  L ++G  P VD 
Sbjct: 307 RATHLNEPRGGGSLTALPIIETEAQNLSAYIPTNLISITDGQIYLSPELFQKGLLPSVDV 366

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+  K   A  + +   L     +FEE
Sbjct: 367 GKSVSRVGGKTQLAAYRAVAGDLRLTYAQFEE 398


>gi|149911796|ref|ZP_01900400.1| ATP synthase subunit A [Moritella sp. PE36]
 gi|149805142|gb|EDM65164.1| ATP synthase subunit A [Moritella sp. PE36]
          Length = 513

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 165/345 (47%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G  + L  G  V   GR F +       GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAVVMGSYMGLAEGQKVRSTGRIFEVPVGRNLLGRVVNTLGEPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  M R+ V++  + GI+ ID   P+  GQR  +     +GKS + 
Sbjct: 122 DNDGFSPVEVIA--PGVMERKSVDQPIQIGIKAIDSMIPIGRGQRELIIGDRQVGKSAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K I   +G++   V   +   E++    ++ ++ VVAT+ E+  L+ +
Sbjct: 180 IDAIINQKDSGIKCIYVAIGQKASTVASVVRKLEEH--GAMENTIFVVATASEAAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +   G + +  +  +V SI DG I L  
Sbjct: 298 LERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLTT 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P VDP  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 ELFNSGTRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|14717972|gb|AAK72728.1| ATP synthase beta subunit [Bretschneidera sinensis]
          Length = 383

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 145/276 (52%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 93  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363


>gi|5001585|gb|AAD37039.1|AF092113_1 ATP synthase beta subunit [Chloranthus oldhamii]
 gi|7708207|emb|CAB90044.1| ATP synthase beta subunit [Chloranthus japonicus]
          Length = 492

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E + I  I G
Sbjct: 393 KELQXIIAILG 403


>gi|149384779|gb|ABR25198.1| ATP synthase beta chain [Thelypteris affinis]
 gi|149384823|gb|ABR25220.1| ATP synthase beta chain [Thelypteris sp. Janssen 2679]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|149384785|gb|ABR25201.1| ATP synthase beta chain [Thelypteris dentata]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|3850952|gb|AAC72168.1| ATP synthase beta subunit [Roupala macrophylla]
          Length = 490

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D          S  I    P  +        F+TGI+V+D+  P 
Sbjct: 96  GATLGRIFNVLGEPVDNLGXXXXXXXS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 215 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G  P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 275 SEVSALLGRXPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPAPA 332

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 392

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 393 LQDIIAILG 401


>gi|149384707|gb|ABR25162.1| ATP synthase beta chain [Microsorum varians]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 29/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 333 LQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|307718888|ref|YP_003874420.1| V-type ATP synthase subunit B [Spirochaeta thermophila DSM 6192]
 gi|306532613|gb|ADN02147.1| V-type ATP synthase subunit B [Spirochaeta thermophila DSM 6192]
          Length = 444

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 181/381 (47%), Gaps = 34/381 (8%)

Query: 26  ISSITSVYYTVTCLS-QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
           I SI     TV     +Y  L + V  QGK    L +VIR++ D+V +   G    IS G
Sbjct: 8   IESIAGNVITVRAQGVRYGHLAEVVSRQGKT---LAEVIRLDGDLVALQVYGGTRGISTG 64

Query: 85  DLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRV- 141
           D V   G   ++S S    GR+ +  G+P D        DL  E++    P++N  +R+ 
Sbjct: 65  DEVRFLGHPMQVSFSDNLLGRIFDGSGRPRDNGP-----DLVDELIEIGGPSVNPAKRII 119

Query: 142 -EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
                +TGI +ID+F  L   Q++ +F+ SG   + LL+  A     D +I+  +G +  
Sbjct: 120 PRNMIRTGIPMIDVFNTLVESQKLPIFSVSGEPYNQLLARIALQAEADVIILGGIGLK-- 177

Query: 201 EVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
                 +DYL        G  L +++  V T+ +  +   + P  ++ +AE F+ KG  V
Sbjct: 178 -----YDDYLFFRNTLEEGGALSRTIFFVHTASDPVVEALLVPDISLAVAERFALKGRRV 232

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L++L  +T FA +++EIA    ++P  RGYP  ++S+L    E+    E   G+IT +  
Sbjct: 233 LVLLTDMTNFADALKEIAITMEQVPSNRGYPGDLYSQLAARYEKAVDFEG-AGSITILAV 291

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
             + GD+   PI D+   I +G   L       GR  P   L+ + +L +K    D + +
Sbjct: 292 TTMPGDDVTHPIPDNTGYITEGQFYL-----RNGRIEPFGSLSRLKQLVNKNTREDHRAI 346

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
           +  +  L   ++ET + + +G
Sbjct: 347 MDGMIKLYAAYKETLEKKAMG 367


>gi|149384733|gb|ABR25175.1| ATP synthase beta chain [Selliguea plantaginea]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|149384705|gb|ABR25161.1| ATP synthase beta chain [Microsorum grossum]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 165/338 (48%), Gaps = 31/338 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 332 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|149384527|gb|ABR25086.1| ATP synthase beta chain [Elaphoglossum andicola]
          Length = 420

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 33  LGRIFNVLGEPVD---NLGPVRNSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 89

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L +    +       +S+ G  G   RE  + Y+         
Sbjct: 90  RGGKIGLLGGAGVGKTVLTTELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 149

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 150 EENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 209

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 210 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 267

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++E
Sbjct: 268 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYKE 326

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 327 LQDIIAILG 335


>gi|328948478|ref|YP_004365815.1| V-type ATP synthase beta chain [Treponema succinifaciens DSM 2489]
 gi|328448802|gb|AEB14518.1| V-type ATP synthase beta chain [Treponema succinifaciens DSM 2489]
          Length = 461

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 15/300 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PIDG   +   D  + +         R       +TGI  ID    L  GQ
Sbjct: 88  GRIFNGLGEPIDGYPQI-ISDKKVNVNGNPINPYARVYPRDFIQTGISSIDGMNTLIRGQ 146

Query: 163 RIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGR-EVREFIEDYLGDN--LK 215
           ++ +F+G+G+  + L +   R     +  ++ ++   G   + +V +F +    ++  L 
Sbjct: 147 KLPIFSGNGLPHNKLAAQIIRQAKILNSNEEFVMVFAGMGIKYDVAQFFKHTFEESGVLS 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
           K V+  + +D   I R + P  A+T AEY + + + +VL+++  +T +  ++REI+T  G
Sbjct: 207 KVVMFQSLADAPSIERIITPRCALTAAEYLAYECNMHVLVVMTDMTNYCEALREISTTRG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           E+P  +GYP  ++S L  L ER G  +   G+IT +  + +  D+ + PI D    I +G
Sbjct: 267 EVPGRKGYPGYLYSNLAELYERAGKIQGSTGSITQIPILSMPNDDISHPIPDLTGYITEG 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390
            IVL+R ++++G YPPV  L S+SRL      +  + ++   VSS   L   + + + IR
Sbjct: 327 QIVLDREMSQKGMYPPVSGLPSLSRLMKDGIGEGMTREDHAPVSS--QLFAAYSKVKSIR 384


>gi|63253227|dbj|BAD98394.1| beta subunit of ATP synthesis [Davallia solida]
          Length = 464

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTC 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           DI  I    PG+D + +   + V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRQTVARARKIERFLSQ 431


>gi|16416750|gb|AAL18398.1|AF313552_1 ATP synthase beta chain [Salvinia molesta]
          Length = 394

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 163/315 (51%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S +  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVNSSTKFPIHRDAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R  A +G YP VDPL S S +  + W   ++       +   + R++E
Sbjct: 242 TFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHYDTAQGVKETLQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 LQDIIAI----PGLD 311


>gi|157888989|dbj|BAF80943.1| beta subunit of ATP synthesis [Humata heterophylla]
          Length = 464

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 163/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|69214416|gb|AAZ03788.1| ATP synthase beta chain [Ginkgo biloba]
          Length = 492

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESG 218

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEY     + +VLL +D+I RF  
Sbjct: 219 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R
Sbjct: 337 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQR 395

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 396 YKELQDIIAILG 407


>gi|157272361|gb|ABV27007.1| ATP synthase beta chain [Azolla microphylla]
 gi|157272379|gb|ABV27016.1| ATP synthase beta chain [Azolla rubra]
          Length = 384

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 159/304 (52%), Gaps = 22/304 (7%)

Query: 107 NALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRI 164
           N LG+P+D   ++G  + S++  + +  PA  +   +   F+TGI+V+D+  P   G +I
Sbjct: 1   NVLGEPVD---NMGPVESSIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 57

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ 
Sbjct: 58  GLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEENIS 117

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++  
Sbjct: 118 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSAL 177

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 178 SGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHL 235

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRDIR 390
           D   VL+R  A +G YP VDPL S S +  + W   A+  +    +   + R++E +DI 
Sbjct: 236 DATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKELQDII 294

Query: 391 LIGG 394
            I G
Sbjct: 295 AILG 298


>gi|149384689|gb|ABR25153.1| ATP synthase beta chain [Dictymia mckeei]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|315187150|gb|EFU20907.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Spirochaeta thermophila DSM 6578]
          Length = 444

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 181/381 (47%), Gaps = 34/381 (8%)

Query: 26  ISSITSVYYTVTCLS-QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
           I SI     TV     +Y  L + V  QGK    L +VIR++ D+V +   G    IS G
Sbjct: 8   IESIAGNVITVRAQGVRYGHLAEVVSRQGKT---LAEVIRLDGDLVALQVYGGTRGISTG 64

Query: 85  DLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRV- 141
           D V   G   ++S S    GR+ +  G+P D        DL  E++    P++N  +R+ 
Sbjct: 65  DEVRFLGHPMQVSFSDNLLGRIFDGSGRPRDNGP-----DLVDELIEIGGPSVNPAKRII 119

Query: 142 -EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
                +TGI +ID+F  L   Q++ +F+ SG   + LL+  A     D +I+  +G +  
Sbjct: 120 PRNMIRTGIPMIDVFNTLVESQKLPIFSVSGEPYNQLLARIALQAEADVIILGGIGLK-- 177

Query: 201 EVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
                 +DYL        G  L +++  V T+ +  +   + P  ++ +AE F+ KG  V
Sbjct: 178 -----YDDYLFFRNTLEEGGALSRTIFFVHTASDPVVEALLVPDISLAVAERFALKGRRV 232

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L++L  +T FA +++EIA    ++P  RGYP  ++S+L    E+    E   G+IT +  
Sbjct: 233 LVLLTDMTNFADALKEIAITMEQVPSNRGYPGDLYSQLAARYEKAVDFEG-AGSITILAV 291

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
             + GD+   PI D+   I +G   L       GR  P   L+ + +L +K    D + +
Sbjct: 292 TTMPGDDVTHPIPDNTGYITEGQFYL-----RNGRIEPFGSLSRLKQLVNKNTREDHRAI 346

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
           +  +  L   ++ET + + +G
Sbjct: 347 MDGMIKLYAAYKETLEKKAMG 367


>gi|312984736|gb|ADR30618.1| ATP synthase beta chain [Lellingeria sp. PHL-2010b]
          Length = 419

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S +  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVQSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|149384739|gb|ABR25178.1| ATP synthase beta chain [Synammia intermedia]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 29/348 (8%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRISNVLGEPVD---NLGPVQSSTTSPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + 
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDL 144

Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256
           Y+           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +
Sbjct: 145 YMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFI 204

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V 
Sbjct: 205 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVP 262

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +   
Sbjct: 263 ADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 321

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +   + R++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 322 GVKQTLQRYKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|37720969|gb|AAN32487.1| ATP synthase beta subunit [Roystonea princeps]
          Length = 497

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVXTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 341 TTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|7708495|emb|CAB89933.1| ATP synthase beta subunit [Metasequoia glyptostroboides]
          Length = 376

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TG
Sbjct: 71  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKLSIFETG 127

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 128 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 186

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 187 LYPEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 246

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 247 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 304

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374
             D+  DP   +  + LD   VL+R LA  G YP VDPL   S +   +   +E  +   
Sbjct: 305 PADDLTDPAPATTFAHLDATTVLSRGLAAXGIYPAVDPLDXTSTMLQPSIVGEEHYETAQ 364

Query: 375 SLTHLIHRFEE 385
            +   + R +E
Sbjct: 365 XVXQTLQRXKE 375


>gi|224830564|gb|ACN66377.1| ATP synthase beta chain [Penianthus patulinervis]
          Length = 422

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ER+  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERM--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|110004064|emb|CAK98403.1| atp synthase alpha chain protein [Spiroplasma citri]
          Length = 523

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 9/337 (2%)

Query: 65  INLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGK 121
           +NL+   +  V +G++ ++  GD V   G+   +P      GRV+NALG+PIDG   L K
Sbjct: 64  LNLEEGAVGAVLMGDDTTVREGDQVRRSGKIVETPVGDALLGRVVNALGQPIDGKGPL-K 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--S 179
              +  +    P  M R+ V++  +TGI  ID   P+  GQR  +      GK+ +   +
Sbjct: 123 AKKTRPVERIAPGVMTRKSVDEPMETGIMTIDAMIPIGKGQRELIIGDRQTGKTAIGIDT 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTA 238
           +  +     K I   +G++   V + +E       L+ + VV AT+ E   L+ +AP T 
Sbjct: 183 ILNQKGKNVKCIYVAIGQKASTVAQIVEKLRAAGALEYTTVVSATASELAPLQYLAPYTG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTI E +   G+NV++I D +++ A + R +A      P    YP  VF    RLLER  
Sbjct: 243 VTIGEEWMESGENVIIIYDDLSKHAVAYRTMALLLHRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
              K    G+ITA+  +     + +  I  +V SI DG I LN      G  P VD   S
Sbjct: 303 RVTKGYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLNNDQFNAGIRPAVDAGLS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           VSR+   A     K++  SL   + ++ E +     G
Sbjct: 363 VSRVGSTAQIKAMKQVAGSLKLELAQYRELQAFAQFG 399


>gi|307931036|dbj|BAJ21379.1| ATP synthase CF1 beta subunit [Picocystis salinarum]
          Length = 294

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 140/267 (52%), Gaps = 23/267 (8%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 3   FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 61

Query: 201 EVREFI----------EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
           E  +            E  L D+  K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 62  EGNDLYMEMKESGVISESNLSDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINN 119

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+
Sbjct: 120 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKTGSITS 177

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +  + W   E
Sbjct: 178 IQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGE 236

Query: 370 KKLV--SSLTHLIHRFEETRDIRLIGG 394
           +      S+   + R++E +DI  I G
Sbjct: 237 EHYTCAQSVKQTLQRYKELQDIIAILG 263


>gi|290745857|gb|ADD51598.1| ATP synthase beta chain [Lellingeria major]
          Length = 411

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|122051521|gb|ABM65863.1| ATP synthase beta chain [Grammitis baldwinii]
          Length = 410

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 62  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 119

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 120 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 179

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 180 QNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 239

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  +  +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 240 VSALLGRMPSAVGYQPTXGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 297

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 298 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 356

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 357 QDIIAILG 364


>gi|266621652|ref|ZP_06114587.1| V-type sodium ATPase, B subunit [Clostridium hathewayi DSM 13479]
 gi|288866687|gb|EFC98985.1| V-type sodium ATPase, B subunit [Clostridium hathewayi DSM 13479]
          Length = 467

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 148/284 (52%), Gaps = 22/284 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
             ++ S    GR  N +G+PIDG   +   D+ +++  K    + R+      +TGI  I
Sbjct: 77  MELAVSEDMLGRTFNGVGEPIDGLGDISS-DIRLDVNGKPLNPVTREYPRDYIRTGISAI 135

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMF---------ARSDCFDKVIISLVGERGREVR 203
           D    L  GQ++ +F+G+G+    L +           A+S     V+ + +G     V+
Sbjct: 136 DGLMTLIRGQKLPIFSGNGLPHDDLAAQIVKQASLGDDAQSSEKFAVVFAAMG-----VK 190

Query: 204 EFIEDYLGDNLKKS------VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLIL 256
             + D+     ++S       + +  +++  + R + P  A+T+AEY +  KG ++L+IL
Sbjct: 191 YDVADFFRRTFEESGVSDHVAMFINLANDPVVERLITPKVALTLAEYLAFEKGMHILVIL 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
             +T +A ++RE++++ GE+P  +GYP  ++SEL  + ER G  +   G++T +  + + 
Sbjct: 251 TDMTAYAEALREVSSSKGEIPSRKGYPGYLYSELAAIYERAGIVKGRHGSVTQIPILTMP 310

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D+   PI D    I +G IVL+R+L  +  YPP++ L S+SRL
Sbjct: 311 NDDITHPIPDLTGYITEGQIVLDRNLYGQSIYPPINVLPSLSRL 354


>gi|46360695|gb|AAS89129.1| ATP synthase beta subunit [Moerckia flotoviana]
          Length = 382

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 153/305 (50%), Gaps = 22/305 (7%)

Query: 106 INALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
            N LG+P+D    LG  D  M   I    P ++        F+TGI+V+D+  P   G +
Sbjct: 6   FNVLGEPVD---DLGPVDTGMTFPIHRSAPASIQLDTKLSIFETGIKVVDLLAPYRRGGK 62

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNL 214
           IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+
Sbjct: 63  IGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNI 122

Query: 215 KKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
            +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++ 
Sbjct: 123 SESKVAPVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSA 182

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 183 LLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAH 240

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDI 389
           LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI
Sbjct: 241 LDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDI 299

Query: 390 RLIGG 394
             I G
Sbjct: 300 IAILG 304


>gi|46360722|gb|AAS89142.1| ATP synthase beta subunit [Symphyogyna hymenophyllum]
          Length = 379

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 151/303 (49%), Gaps = 18/303 (5%)

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 3   FNVLGEPVDNLGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 61

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKK 216
           +F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +
Sbjct: 62  LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISE 121

Query: 217 SVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
           S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 122 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALL 181

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E   L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 182 GRMPSAVGYQPTLSTETGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHLD 239

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  
Sbjct: 240 ATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAKGVKQTLQRYKELQDIIA 298

Query: 392 IGG 394
           I G
Sbjct: 299 ILG 301


>gi|182683833|ref|YP_001835580.1| v-type ATP synthase subunit B [Streptococcus pneumoniae CGSP14]
 gi|303255942|ref|ZP_07341971.1| V-type ATP synthase subunit B [Streptococcus pneumoniae BS455]
 gi|303260441|ref|ZP_07346410.1| v-type ATP synthase subunit B [Streptococcus pneumoniae SP-BS293]
 gi|303262798|ref|ZP_07348736.1| v-type ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292]
 gi|303265087|ref|ZP_07351001.1| v-type ATP synthase subunit B [Streptococcus pneumoniae BS397]
 gi|303267020|ref|ZP_07352893.1| v-type ATP synthase subunit B [Streptococcus pneumoniae BS457]
 gi|303269500|ref|ZP_07355266.1| v-type ATP synthase subunit B [Streptococcus pneumoniae BS458]
 gi|238691151|sp|B2IP44|VATB_STRPS RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|182629167|gb|ACB90115.1| v-type ATP synthase subunit B [Streptococcus pneumoniae CGSP14]
 gi|301794041|emb|CBW36440.1| V-type sodium ATP synthase subunit B [Streptococcus pneumoniae
           INV104]
 gi|301801737|emb|CBW34444.1| V-type sodium ATP synthase subunit B [Streptococcus pneumoniae
           INV200]
 gi|302597076|gb|EFL64193.1| V-type ATP synthase subunit B [Streptococcus pneumoniae BS455]
 gi|302636120|gb|EFL66617.1| v-type ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292]
 gi|302638476|gb|EFL68942.1| v-type ATP synthase subunit B [Streptococcus pneumoniae SP-BS293]
 gi|302640985|gb|EFL71366.1| v-type ATP synthase subunit B [Streptococcus pneumoniae BS458]
 gi|302643467|gb|EFL73741.1| v-type ATP synthase subunit B [Streptococcus pneumoniae BS457]
 gi|302645447|gb|EFL75680.1| v-type ATP synthase subunit B [Streptococcus pneumoniae BS397]
          Length = 461

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I+ D  +V +     G  +    + F      ++ S    GR+ N +GKPIDG  
Sbjct: 44  GQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  ++I  +    ++R   ++  +TGI  ID    L  GQ++ VF+GSG+  + L
Sbjct: 104 DLIP-EKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNEL 162

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSD 225
            +  AR      SD    V+ + +G     +     ++  + L+K      SV+ +  ++
Sbjct: 163 AAQIARQATVLNSDENFAVVFAAMG-----ITFEEAEFFMEELRKTGAIDRSVLFMNLAN 217

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  RGYP 
Sbjct: 218 DPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPG 277

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+  L  
Sbjct: 278 YLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHELYN 337

Query: 345 EGRYPPVDPLASVSRLADKA 364
           +G  PP++ L+S+SRL DK 
Sbjct: 338 QGYRPPINVLSSLSRLKDKG 357


>gi|149384807|gb|ABR25212.1| ATP synthase beta chain [Thelypteris opulenta]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|5001599|gb|AAD37046.1|AF092120_1 ATP synthase beta subunit [Hibbertia volubilis]
          Length = 479

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 149/308 (48%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PI  +                P  +        F+TGI V+D+  P  
Sbjct: 86  ATLGRIXNVLGEPIX-NXXXXXXXXXXXXXXXAPAFIQLDTXXSIFETGIXVVDLLAPYR 144

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 145 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 204

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 205 EQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 264

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 265 EVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 322

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E 
Sbjct: 323 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKEL 382

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 383 QDIIAILG 390


>gi|159227278|emb|CAJ80430.1| ATP synthase beta subunit [Solanum oplocense]
          Length = 336

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 20/308 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+
Sbjct: 33  IRVPVGGATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIK 89

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 90  VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 149

Query: 211 ---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 150 EMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 209

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D
Sbjct: 210 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPAD 267

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +   P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 268 DLTVPAPGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 327

Query: 378 HLIHRFEE 385
             + R++E
Sbjct: 328 QTLQRYKE 335


>gi|119510739|ref|ZP_01629866.1| ATP synthase subunit A [Nodularia spumigena CCY9414]
 gi|119464603|gb|EAW45513.1| ATP synthase subunit A [Nodularia spumigena CCY9414]
          Length = 506

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 161/350 (46%), Gaps = 26/350 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G   + Q    DN+G V+           +G G EI  G  V   GR    P      GR
Sbjct: 60  GTIGIAQNLEEDNVGAVL-----------MGQGLEIQEGSSVTATGRIAQVPVGEAMVGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           V++ALG+ IDG     KGD++      I S  P  + R+ V +  +TGI  ID   P+  
Sbjct: 109 VVDALGRAIDG-----KGDINTTESRLIESAAPGIIARRSVHEPMQTGITAIDSMIPVGR 163

Query: 161 GQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKS 217
           GQR  +      GK+ + +         D + + + +G++   V   ++       +  +
Sbjct: 164 GQRELIIGDRQTGKTAIAIDTIINQKGEDVICVYVAIGQKASTVANVVQTLQEKGAMDYT 223

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A++ E   L+ +AP T  +IAEYF  KG   L+I D +++ A + R+++      P
Sbjct: 224 VVVAASASEPATLQFLAPYTGASIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPP 283

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG 
Sbjct: 284 GREAYPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQ 343

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           I L+  L   G  P V+P  SVSR+   A +   KK+   +   + +F++
Sbjct: 344 IFLSSDLFNAGIRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFDD 393


>gi|291166002|gb|EFE28049.1| V-type ATP synthase beta chain 2 (V-type ATPase subunitB 2)
           [Filifactor alocis ATCC 35896]
          Length = 458

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 156/309 (50%), Gaps = 20/309 (6%)

Query: 102 CGRVINALGKPIDGDD---SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR  N LG+ +DG     S  + +++   M+ V  +  R  +E    TGI  ID    L
Sbjct: 87  LGRQFNGLGQSVDGIGPIYSSKRYNVNGRPMNPVARSYPRDYLE----TGISAIDSLMTL 142

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGD 212
             GQ++ +F+G+G+  + L +   R            ++   +G +  +   F + + G 
Sbjct: 143 IRGQKLPIFSGNGLPHNELAAQIVRQASVKGEESNFAIVFGAMGIKHDDADFFRQSFEGS 202

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             +++ V+ V  +D+  + R   P  A+T AEY +  +G +VL+IL  IT +A ++RE++
Sbjct: 203 GVIERVVMYVNLADDPAVERISTPRCALTAAEYLAYEEGMHVLVILTDITAYAEALRELS 262

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
           +   E+P  +GYP  ++S+L  L ER G    +KG++T +  + +  D+   PI D    
Sbjct: 263 SAREEVPSRKGYPGYLYSDLATLYERAGMVLDKKGSVTLLPILTMPNDDITHPIPDLTGY 322

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385
           I +G IVL+R LA++  YPP++ L S+SRL      D     D  ++ S L     R +E
Sbjct: 323 ITEGQIVLSRDLAKQNVYPPINVLPSLSRLMKDGIGDGFTREDHDEVSSQLFSSYSRVQE 382

Query: 386 TRDIRLIGG 394
            R +  I G
Sbjct: 383 VRSLAQIIG 391


>gi|149384683|gb|ABR25150.1| ATP synthase beta chain [Arthromeris wallichiana]
          Length = 426

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|37720997|gb|AAN32501.1| ATP synthase beta subunit [Lanaria lanata]
          Length = 497

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +  +DI  I G
Sbjct: 399 KXLQDIIAILG 409


>gi|224830590|gb|ACN66390.1| ATP synthase beta chain [Tinomiscium petiolare]
          Length = 395

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 150/303 (49%), Gaps = 22/303 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 212

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 213 GVINEPNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNELDVLLFIDNIFRFV 272

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 273 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    + H   R
Sbjct: 331 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAHRVKHTSQR 390

Query: 383 FEE 385
           ++E
Sbjct: 391 YKE 393


>gi|312984744|gb|ADR30622.1| ATP synthase beta chain [Lellingeria flagellipinnata]
 gi|312984746|gb|ADR30623.1| ATP synthase beta chain [Lellingeria flagellipinnata]
          Length = 419

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
           +N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 ENISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|217966572|ref|YP_002352078.1| ATP synthase F1, alpha subunit [Dictyoglomus turgidum DSM 6724]
 gi|226739874|sp|B8DYT2|ATPA_DICTD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|217335671|gb|ACK41464.1| ATP synthase F1, alpha subunit [Dictyoglomus turgidum DSM 6724]
          Length = 508

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 192/411 (46%), Gaps = 20/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           GY+  +      V+ L+    +G+ VV +   S   G V+ +  D V +   G  E +  
Sbjct: 30  GYVKHVGDGVAEVSLLNS-AFIGEMVVFE---SGIQGMVLSLKEDSVGVILFGKDEYVKE 85

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD+V+   +    P+   + GRVI+ LG PIDG   L   +  + I ++ P   +R+ V+
Sbjct: 86  GDVVYSTSKILQVPTGNGFLGRVIDPLGNPIDGG-GLIFPEAYVPIDNEAPSIFDREPVK 144

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISLVGERGR- 200
           +   TGIR ID   P+ HGQR  +      GK+T+ L        +  + I +   + R 
Sbjct: 145 EPLYTGIRTIDALIPIGHGQRELILGDRQTGKTTIALDTIISQKNYGTICIYVAIAQKRT 204

Query: 201 ---EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
               + + + +Y    L  ++V+    DE P LR +AP+    + EYF  +G+ VL++ D
Sbjct: 205 NIARIVQTLREY--GALSNTIVIATFPDEPPALRYIAPMAGCAMGEYFMRQGERVLIVYD 262

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN--ITAV-ISVL 314
            +T+ A++ RE+A     +P    YP  +F     LLER     K  G   +TA+ I+  
Sbjct: 263 DLTKHANTYREVALLLRRVPGREAYPGDIFYLHAHLLERAAKLNKRLGGGALTALPIAET 322

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           + G+  +  I  ++ SI DG I L+ +L   G  P ++   SVSR+   A     +++  
Sbjct: 323 LSGE-ISTYIPTNLISITDGQIYLDTNLFNAGIRPAINVGLSVSRVGGSAQPKGMRQVAG 381

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
            L   + ++   R+  +   +   +D+   K + +   + + LKQ   ++ 
Sbjct: 382 RLRLDLAQY---REYAMFLEFGTELDMATKKKIERGRRVEELLKQGAHEVQ 429


>gi|149384687|gb|ABR25152.1| ATP synthase beta chain [Campyloneurum latum]
          Length = 426

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSSATSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|149384749|gb|ABR25183.1| ATP synthase beta chain [Arthropteris parallela]
          Length = 426

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 156/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSNATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|72080393|ref|YP_287451.1| F0F1 ATP synthase subunit alpha [Mycoplasma hyopneumoniae 7448]
          Length = 508

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 155/324 (47%), Gaps = 11/324 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+NALG PIDG   L    L   I +  P  M+R+ V++G KTGI  ID   P+  G
Sbjct: 104 LGRVVNALGIPIDGKAEL-DNSLKSAIFTNAPSIMDRKSVDRGLKTGILAIDSLVPIGKG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+T+   ++  +       +   +G++   V + +        L+ + 
Sbjct: 163 QRELIIGDRQTGKTTIAIDAILNQKGKNVYCVYVAIGQKNSSVAQIVSLLEKKGALEYTT 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V++A + E   L+ +AP +   IAEY+ +K  +VL+I D +++ A + R ++      P 
Sbjct: 223 VILAGASELSPLQYLAPYSGAAIAEYWMNKKKDVLIIYDDLSKHAIAYRTLSLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  +F +   LLER      +K  G+ITA+  +     + +  I  +V SI DG I
Sbjct: 283 REAFPGDIFYQHSYLLERSAQLSNDKGGGSITALPIIETQAGDISAYIPTNVISITDGQI 342

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-Y 395
            L  SL   G+ P +D   SVSR+   A +   K   SSL   + ++ E +     G   
Sbjct: 343 FLRDSLFNSGQKPAIDIGLSVSRVGSAAQTNLMKWASSSLKLNLAQYNELKAFAQFGSDL 402

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
            P   LILD+       IY+ LKQ
Sbjct: 403 GPSSQLILDRGNK----IYEILKQ 422


>gi|290745851|gb|ADD51595.1| ATP synthase beta chain [Lellingeria humilis]
          Length = 411

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|42558406|gb|AAS19912.1| ATP synthase beta chain [Terpsichore hanekeana]
          Length = 422

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG   + ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRIFNVLGEPVD---NLGPVRNSAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|21633413|gb|AAM52181.1| ATP synthase beta subunit [Jacquemontia ovalifolia subsp.
           sandwicensis]
          Length = 484

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI V+D+  
Sbjct: 96  GSTLGRIFNVLGEPVD---NLGPVDTKITSPIHRSAPAFTQLDTKLSIFETGIEVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PHRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVFGGVGXRTREGNDLYMEMQESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               + + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|315128171|ref|YP_004070174.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas sp. SM9913]
 gi|315016684|gb|ADT70022.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas sp. SM9913]
          Length = 513

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I +NL+   I  V +G   +++ G  V+  GR    P  A   GRV+N LG PIDG  +L
Sbjct: 62  IALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGAGLLGRVVNTLGAPIDGKGAL 121

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                  E + K+ P  + RQ V++  +TG + ID   P+  GQR  V      GK+ L 
Sbjct: 122 DND--GFEPVEKIAPGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   VG++   +   +   E++    L  ++VVVA++ ES  L+ +
Sbjct: 180 IDAIINQKDTGVKCVYVAVGQKASTIANVVRKLEEH--GALANTIVVVASASESAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APFSGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +   G + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNTDYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE 402


>gi|149798675|gb|ABR32028.1| ATP synthase beta chain [Cryptogramma crispa]
          Length = 426

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRNTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMETKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGPTALTMAEYFRDINRQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|7688415|emb|CAB89732.1| ATP synthase beta subunit [Veratrum viride]
          Length = 488

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTNEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R  A +G YP VDPL S S +       +E  +    +     R+
Sbjct: 332 PATTFAHLDATTVLSRGFAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|312984766|gb|ADR30633.1| ATP synthase beta chain [Lellingeria major]
 gi|312984784|gb|ADR30642.1| ATP synthase beta chain [Lellingeria sp. PHL-2010d]
 gi|312984794|gb|ADR30647.1| ATP synthase beta chain [Lellingeria pseudocapillaris]
 gi|312984796|gb|ADR30648.1| ATP synthase beta chain [Lellingeria pseudocapillaris]
 gi|312984824|gb|ADR30662.1| ATP synthase beta chain [Lellingeria tamandarei]
          Length = 419

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|156739818|gb|ABU93562.1| ATP synthase beta subunit [Pleocnemia winitii]
          Length = 389

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLLGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVASVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|169260969|gb|ACA52086.1| ATP synthase beta subunit [Danaea elliptica]
          Length = 320

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 149/283 (52%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D     G  D+ ++  + K  PA  +   +   F+TGI+V+D+  P  
Sbjct: 37  LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 93

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 94  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 153

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 154 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 213

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 214 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 271

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +  D   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 272 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 313


>gi|159232304|emb|CAJ80667.1| ATP synthase beta subunit [Solanum tuberosum]
          Length = 336

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 152/308 (49%), Gaps = 20/308 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+
Sbjct: 33  IRVPVGGATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIK 89

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 90  VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 149

Query: 211 ---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                     +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 150 EMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 209

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D
Sbjct: 210 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPAD 267

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +   P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    + 
Sbjct: 268 DLTVPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 327

Query: 378 HLIHRFEE 385
             + R++E
Sbjct: 328 QTLQRYKE 335


>gi|299890928|gb|ADJ57427.1| ATP synthase CF1 beta subunit [uncultured prymnesiophyte C19847]
          Length = 475

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 26/310 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG P+D    +G  D S    I    P   +       F+TGI+V+D+  P   
Sbjct: 91  GRIFNVLGVPVD---EMGPCDNSSTSPIHRPSPQFTDLDTKPSVFETGIKVVDLLAPYRR 147

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206
           G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +            
Sbjct: 148 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYCEMKESGVIN 206

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           E+ L D+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 207 ENKLDDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 264

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP  
Sbjct: 265 GSEVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTNEGSITSIQAVYVPADDLTDPAP 322

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +        +   + R++
Sbjct: 323 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGELHYGTAQRIKETLQRYK 382

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 383 ELQDIIAILG 392


>gi|149384835|gb|ABR25226.1| ATP synthase beta chain [Cornopteris decurrenti-alata]
          Length = 426

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 151/306 (49%), Gaps = 22/306 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQGSTTFPIHRSAPAFTQLDTKLSIFETGIKVADLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDI 389
           +E +DI
Sbjct: 331 KELQDI 336


>gi|6688903|emb|CAB65312.1| ATP synthase beta subunit [Nerium oleander]
          Length = 394

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 19/285 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEE 383


>gi|169260975|gb|ACA52089.1| ATP synthase beta subunit [Tmesipteris elongata]
          Length = 314

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 141/286 (49%), Gaps = 22/286 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D    I    P           F+TGI+V+D+  P
Sbjct: 24  ATLGRIFNVLGEPVD---NLGPINADKKSPIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 80

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 81  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVX-ERTREGNDLYTEMKESK 139

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  
Sbjct: 140 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 199

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 200 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPA 257

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 258 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 302


>gi|224830544|gb|ACN66367.1| ATP synthase beta chain [Legnephora moorei]
          Length = 489

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 169/361 (46%), Gaps = 33/361 (9%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G     P      GR
Sbjct: 44  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLKXGMEVIDTGAPLXVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS----- 217
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S     
Sbjct: 161 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVINE 218

Query: 218 --------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
                    +V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  +  E
Sbjct: 219 QNIVESKVALVYGQMNEPPGARMRVGLTALXMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 278

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 279 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 336

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + R++E +
Sbjct: 337 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQ 396

Query: 388 D 388
           D
Sbjct: 397 D 397


>gi|160915834|ref|ZP_02078042.1| hypothetical protein EUBDOL_01850 [Eubacterium dolichum DSM 3991]
 gi|158432310|gb|EDP10599.1| hypothetical protein EUBDOL_01850 [Eubacterium dolichum DSM 3991]
          Length = 471

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 143/272 (52%), Gaps = 20/272 (7%)

Query: 103 GRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
           GRV +  GK IDG   +    + D++ + ++ V     R  +     TGI  ID  T L 
Sbjct: 82  GRVFSGSGKAIDGLPEIYAQKRADINGQPLNPVSRVYPRNYI----NTGISSIDALTTLI 137

Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR----SDCFDKVIISLVGERGREVREFIEDYLGDNLK 215
            GQ++ +F+GSG+  + L     +    +D   K    +    G  V+  + DY   + +
Sbjct: 138 RGQKLPIFSGSGMPHNELAVQLVKQAKIADGDGKNFCIVFAAMG--VKNDVADYFKRSFE 195

Query: 216 KSVVV------VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
           ++ V+      V  S++  I R + P  A+T AEY + + D +VL+IL  IT +  ++RE
Sbjct: 196 EAGVMDRVAMFVNLSNDPIIERTLTPRCALTAAEYLAYEHDMHVLVILTDITSYCEALRE 255

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
            +++ GE+P  +GYP  ++S+L  L ER G  +  KG++T +  + +  D+   PI D  
Sbjct: 256 FSSSKGEIPGRKGYPGYLYSDLASLYERAGIIKGAKGSVTQIPILTMPNDDITHPIPDLT 315

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             I +G IVL+RSL + G YPPV  L S+SRL
Sbjct: 316 GYITEGQIVLDRSLNQMGIYPPVGILPSLSRL 347


>gi|148886604|sp|Q4A8W1|ATPA_MYCH7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|144575260|gb|AAZ53428.2| ATP synthase alpha chain [Mycoplasma hyopneumoniae 7448]
 gi|312601018|gb|ADQ90273.1| ATP synthase subunit alpha [Mycoplasma hyopneumoniae 168]
          Length = 507

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 155/324 (47%), Gaps = 11/324 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+NALG PIDG   L    L   I +  P  M+R+ V++G KTGI  ID   P+  G
Sbjct: 103 LGRVVNALGIPIDGKAEL-DNSLKSAIFTNAPSIMDRKSVDRGLKTGILAIDSLVPIGKG 161

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+T+   ++  +       +   +G++   V + +        L+ + 
Sbjct: 162 QRELIIGDRQTGKTTIAIDAILNQKGKNVYCVYVAIGQKNSSVAQIVSLLEKKGALEYTT 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V++A + E   L+ +AP +   IAEY+ +K  +VL+I D +++ A + R ++      P 
Sbjct: 222 VILAGASELSPLQYLAPYSGAAIAEYWMNKKKDVLIIYDDLSKHAIAYRTLSLLLRRPPG 281

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  +F +   LLER      +K  G+ITA+  +     + +  I  +V SI DG I
Sbjct: 282 REAFPGDIFYQHSYLLERSAQLSNDKGGGSITALPIIETQAGDISAYIPTNVISITDGQI 341

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-Y 395
            L  SL   G+ P +D   SVSR+   A +   K   SSL   + ++ E +     G   
Sbjct: 342 FLRDSLFNSGQKPAIDIGLSVSRVGSAAQTNLMKWASSSLKLNLAQYNELKAFAQFGSDL 401

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
            P   LILD+       IY+ LKQ
Sbjct: 402 GPSSQLILDRGNK----IYEILKQ 421


>gi|42558330|gb|AAS19874.1| ATP synthase beta chain [Ctenopteris aff. repandula Ranker and
           Trapp 1766]
 gi|42558332|gb|AAS19875.1| ATP synthase beta chain [Ctenopteris repandula]
          Length = 422

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|21264378|sp|O03068|ATPB_DENPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|6724299|gb|AAB51744.2| ATP synthase beta chain [Dennstaedtia punctilobula]
          Length = 486

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 151/308 (49%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + + + +  I    P           F+TGI+V+D+  P   G
Sbjct: 89  LGRISNVLGEPVDNPGPV-QSNTTFPIHRSAPAFTQLDTKLSTFETGIKVVDLLAPYRRG 147

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     +   
Sbjct: 148 GKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINE 206

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R     TA T+AEYF      +V L +D+I RF  +  E
Sbjct: 207 QNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVPLFIDNILRFVQAGSE 266

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 267 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 324

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +     R++E 
Sbjct: 325 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTSQRYKEL 383

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 384 QDIIAILG 391


>gi|328681579|gb|AEB32862.1| ATP synthase beta subunit [Mastigophora woodsii]
          Length = 377

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 156/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S+   + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|304373432|ref|YP_003856641.1| ATP synthase subunit B [Mycoplasma hyorhinis HUB-1]
 gi|304309623|gb|ADM22103.1| ATP synthase subunit B [Mycoplasma hyorhinis HUB-1]
          Length = 464

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 167/331 (50%), Gaps = 19/331 (5%)

Query: 77  IGEEISLGDLVFHWGRFRISPSACWCGRVINAL-GKPIDGDDSLGKGDLSMEIMSKVPPA 135
           +  EI + D+V +  R  + P        I +  GKP+     L   + +  +  +V   
Sbjct: 56  LSSEIKINDVVTNTKRSFVVPVGKNSKNNIYSFEGKPL-----LTNRNANSPLYVEVDST 110

Query: 136 MNRQRV----EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           +N+ R      +  +TGI+ ID F P+  G ++G+F G+G+GK+ L+     +   DK  
Sbjct: 111 INKSRFFDVQAEVIQTGIKAIDFFIPIVKGFKLGIFGGAGVGKTVLMKEIIFNVNKDKKS 170

Query: 192 ISLV----GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           IS +    GER RE  E   +    NL K S + ++  +ESP  R       +T AEY  
Sbjct: 171 ISNIFIGSGERSREAIELFNELESSNLMKNSSMYISKMNESPGARMSIVPIGITAAEYLR 230

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             + ++VLL +D+I RF  +  E++ + G+ P   GY +++ S++  + ER+   + + G
Sbjct: 231 DYEKEDVLLFIDNIYRFVQAENEVSASLGKKPSVGGYQSTLDSDVASVQERL--FKNQNG 288

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
            IT+  ++ +  D+ +DP A +V + LDG +VL+R  + +  +P  DPLAS S  + +K 
Sbjct: 289 AITSFQTIFLPMDDLSDPSAVAVFNHLDGKLVLSREQSSKNIFPAFDPLASSSNSVNEKI 348

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
                   +     ++ +++E  D+ LI G+
Sbjct: 349 IGKKHFNAIIEAKKILAKYKELEDVILILGF 379


>gi|149384413|gb|ABR25029.1| ATP synthase beta chain [Asplenium praemorsum]
          Length = 426

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|312984790|gb|ADR30645.1| ATP synthase beta chain [Lellingeria phlegmaria]
          Length = 419

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 29  TTLGRIFNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 86

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+        
Sbjct: 87  RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVI 146

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 265 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|149384373|gb|ABR25009.1| ATP synthase beta chain [Anemia adiantifolia]
          Length = 426

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D S M  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---DLGPVDSSAMFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG F G+G+GK+     L++  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGSFGGAGVGKTVPIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R    LTA+T+AEY       +VLL +D+I RF  + 
Sbjct: 155 NEQDVSESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E+    G +P A GY  ++ +E+  L ERI  +  ++G+IT+  +V V  D+  DP   
Sbjct: 215 SEVPALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSTQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|312984754|gb|ADR30627.1| ATP synthase beta chain [Lellingeria isidrensis]
          Length = 387

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 16  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 73

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 74  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 133

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 134 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 193

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 194 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 251

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 252 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 310

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 311 QDIIAILG 318


>gi|113910910|gb|ABI48187.1| ATPase beta subunit [Plagiothecium laetum]
          Length = 456

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D     G  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 67  ATLGRIFNVLGETVDNS---GPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEY       +VLL +D+I RF  +
Sbjct: 184 INEENISESKVASVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 361 KELQDIIAILG 371


>gi|14718208|gb|AAK72842.1| ATP synthase beta subunit [Sassafras albidum]
          Length = 486

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 156/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+G + L+     +        S+ G  G   RE  + Y+   +K+
Sbjct: 152 PYRRGGKIGLFGGAGVGXTVLIMELINNIAKAHGGXSVFGXVGERTREGNDLYM--EMKE 209

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 210 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 327

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     
Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQ 387

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 388 RYKELQDIIAILG 400


>gi|224830538|gb|ACN66364.1| ATP synthase beta chain [Hyperbaena ilicifolia]
          Length = 472

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 207

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 208 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL   S  L  +    +  +    +     R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDXTSTMLQPRIVGKEHYETAQRVKQTSQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIIAILG 397


>gi|224830518|gb|ACN66354.1| ATP synthase beta chain [Cocculus orbiculatus]
          Length = 489

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P++   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVE---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 391

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 392 YKELQDIIAILG 403


>gi|149384555|gb|ABR25100.1| ATP synthase beta chain [Elaphoglossum lingua]
          Length = 426

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|149384545|gb|ABR25095.1| ATP synthase beta chain [Elaphoglossum herminieri]
          Length = 418

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVRNSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLLGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|49182447|gb|AAT57702.1| ATP synthase beta chain [Scapania nemorea]
          Length = 369

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 156/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|27435906|gb|AAO13282.1| ATP synthase beta subunit [Sciadopitys verticillata]
          Length = 385

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 158/331 (47%), Gaps = 30/331 (9%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D  GQ IR+  ++        V    +   + +  G  V   G    +       GR
Sbjct: 40  KDQDTNGQPIRVTCEVQQLLGNNKVRAVAMSATDGLKRGMRVIDTGAPLSVPVGEATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D      + +  PA  +       F+TGI+V+D+  P   G 
Sbjct: 100 IFNVLGEPVD---DLGPVDTPKTSPIHRSAPAFTQLDTRFSIFETGIKVVDLLAPYRRGG 156

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +    
Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 215

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E+
Sbjct: 216 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 275

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  
Sbjct: 276 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 333

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           + LD   VL+R LA +G YP VDPL S S +
Sbjct: 334 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 364


>gi|224830486|gb|ACN66338.1| ATP synthase beta chain [Arcangelisia flava]
          Length = 489

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 98  GATLGRIFNVLGEPVDNLGPVXXXTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 156

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS- 217
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S 
Sbjct: 157 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESG 214

Query: 218 ------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                        +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 215 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAXRVKQTSQRY 392

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 393 KELQDIIAILG 403


>gi|149384389|gb|ABR25017.1| ATP synthase beta chain [Asplenium contiguum]
          Length = 426

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|156622729|dbj|BAF76345.1| ATP synthase beta subunit [Amborella trichopoda]
          Length = 487

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 155/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +I +F  +G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 154 YRRGGKIALFGRAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I+RF  +
Sbjct: 214 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQA 273

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 391

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 392 ELQDIIAILG 401


>gi|42558434|gb|AAS19926.1| ATP synthase beta chain [Microgramma squamulosa]
          Length = 422

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 165/338 (48%), Gaps = 31/338 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 131 RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 189

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 190 NEQNISESKVALVYGQMNEPPGARMXVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 249

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 250 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 307

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 308 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 366

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 367 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 400


>gi|54301814|ref|YP_131807.1| F0F1 ATP synthase subunit alpha [Photobacterium profundum SS9]
 gi|81614756|sp|Q6LKZ8|ATPA2_PHOPR RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|46915234|emb|CAG22007.1| putative ATP synthase alpha subunit protein [Photobacterium
           profundum SS9]
          Length = 513

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  ++     S +EI++  P  + RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGAIENDGYSPVEIIA--PGVIERQSVDQPIQTGYKAVDAMVPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ +   ++  + D   K +   +G++   +   +   E++  D LK 
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEH--DALKN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ ++  L+ +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASDAAALQYLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERASRVNVSYVERFTKGKVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLQTHLFNSGLRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|290745867|gb|ADD51603.1| ATP synthase beta chain [Lellingeria suspensa]
          Length = 403

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|99640401|emb|CAJ45070.1| putative beta subunit of chloroplast ATP synthase [Alsophila
           colensoi]
          Length = 493

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+ +D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 106 GRISNVLGETVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVD 400
           +DI  I    PG+D
Sbjct: 400 QDIIAI----PGLD 409


>gi|63253239|dbj|BAD98403.1| beta subunit of ATP synthesis [Davallia tasmani]
          Length = 464

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 162/335 (48%), Gaps = 27/335 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G     I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-RFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419
           DI  I    PG+D + +   + V +   I  FL Q
Sbjct: 401 DIIAI----PGLDELSEEDRQTVARARKIERFLSQ 431


>gi|159232218|emb|CAJ80624.1| ATP synthase beta subunit [Solanum tuberosum]
          Length = 336

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 154/301 (51%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S M  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+   P  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTVPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|156739734|gb|ABU93520.1| ATP synthase beta subunit [Arachniodes festina]
 gi|156739778|gb|ABU93542.1| ATP synthase beta subunit [Arachniodes standishii]
          Length = 394

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|49182449|gb|AAT57703.1| ATP synthase beta chain [Trichocolea tomentosa]
 gi|328681575|gb|AEB32860.1| ATP synthase beta subunit [Trichocolea tomentosa]
          Length = 369

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTSFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|75336640|sp|Q9MU81|ATPB_CARMI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582346|gb|AAF64288.1| ATP synthase beta subunit [Caryota mitis]
          Length = 498

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TG +V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGXKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|22128005|ref|NP_671428.1| F0F1 ATP synthase subunit alpha [Yersinia pestis KIM 10]
 gi|45443753|ref|NP_995292.1| F0F1 ATP synthase subunit alpha [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51598253|ref|YP_072444.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis IP
           32953]
 gi|108810158|ref|YP_654074.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Antiqua]
 gi|108814140|ref|YP_649907.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Nepal516]
 gi|145601150|ref|YP_001165226.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Pestoides F]
 gi|150260943|ref|ZP_01917671.1| ATP synthase alpha subunit protein [Yersinia pestis CA88-4125]
 gi|153947933|ref|YP_001403120.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis IP
           31758]
 gi|162420247|ref|YP_001608474.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Angola]
 gi|165926151|ref|ZP_02221983.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939982|ref|ZP_02228519.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009456|ref|ZP_02230354.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213370|ref|ZP_02239405.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401617|ref|ZP_02307111.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422835|ref|ZP_02314588.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425467|ref|ZP_02317220.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170026428|ref|YP_001722933.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis YPIII]
 gi|186897466|ref|YP_001874578.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis PB1/+]
 gi|218931099|ref|YP_002348974.1| F0F1 ATP synthase subunit alpha [Yersinia pestis CO92]
 gi|229839833|ref|ZP_04459992.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229841917|ref|ZP_04462073.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229896794|ref|ZP_04511957.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Pestoides A]
 gi|229904683|ref|ZP_04519794.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Nepal516]
 gi|270488393|ref|ZP_06205467.1| ATP synthase F1, alpha subunit [Yersinia pestis KIM D27]
 gi|294505646|ref|YP_003569708.1| ATP synthase subunit A [Yersinia pestis Z176003]
 gi|81593623|sp|Q8Z9S4|ATPA_YERPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81691599|sp|Q663Q6|ATPA_YERPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118573498|sp|Q1C093|ATPA_YERPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122979849|sp|Q1CCH3|ATPA_YERPN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158514115|sp|A4TSJ1|ATPA_YERPP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166990365|sp|A7FPE2|ATPA_YERP3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739960|sp|B2K845|ATPA_YERPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739961|sp|A9R5U1|ATPA_YERPG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739962|sp|B1JRN0|ATPA_YERPY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|21961153|gb|AAM87679.1|AE014015_4 membrane-bound ATP synthase, F1 sector, alpha-subunit [Yersinia
           pestis KIM 10]
 gi|45438623|gb|AAS64169.1| ATP synthase alpha subunit protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51591535|emb|CAH23207.1| ATP synthase alpha subunit protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108777788|gb|ABG20307.1| ATP synthase alpha subunit protein [Yersinia pestis Nepal516]
 gi|108782071|gb|ABG16129.1| ATP synthase alpha subunit protein [Yersinia pestis Antiqua]
 gi|115349710|emb|CAL22691.1| ATP synthase alpha subunit protein [Yersinia pestis CO92]
 gi|145212846|gb|ABP42253.1| ATP synthase alpha subunit protein [Yersinia pestis Pestoides F]
 gi|149290351|gb|EDM40428.1| ATP synthase alpha subunit protein [Yersinia pestis CA88-4125]
 gi|152959428|gb|ABS46889.1| ATP synthase F1, alpha subunit [Yersinia pseudotuberculosis IP
           31758]
 gi|162353062|gb|ABX87010.1| ATP synthase F1, alpha subunit [Yersinia pestis Angola]
 gi|165912108|gb|EDR30748.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922011|gb|EDR39188.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991378|gb|EDR43679.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205668|gb|EDR50148.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958227|gb|EDR55248.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167048999|gb|EDR60407.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055481|gb|EDR65274.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752962|gb|ACA70480.1| ATP synthase F1, alpha subunit [Yersinia pseudotuberculosis YPIII]
 gi|186700492|gb|ACC91121.1| ATP synthase F1, alpha subunit [Yersinia pseudotuberculosis PB1/+]
 gi|229678801|gb|EEO74906.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Nepal516]
 gi|229691256|gb|EEO83309.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229696199|gb|EEO86246.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700232|gb|EEO88268.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Pestoides A]
 gi|262363811|gb|ACY60532.1| ATP synthase subunit A [Yersinia pestis D106004]
 gi|262367747|gb|ACY64304.1| ATP synthase subunit A [Yersinia pestis D182038]
 gi|270336897|gb|EFA47674.1| ATP synthase F1, alpha subunit [Yersinia pestis KIM D27]
 gi|294356105|gb|ADE66446.1| ATP synthase subunit A [Yersinia pestis Z176003]
 gi|320017458|gb|ADW01030.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 513

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG  S+     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGSIENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++  D L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEH--DALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|302390262|ref|YP_003826083.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermosediminibacter oceani DSM 16646]
 gi|302200890|gb|ADL08460.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermosediminibacter oceani DSM 16646]
          Length = 457

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 15/321 (4%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F     RI+ S    GR+ N + KPIDG   +   + + ++  +    + R       +T
Sbjct: 72  FTGSPMRITLSRDILGRIFNGIAKPIDGAGEI-YSENTYDVNGRPINPVARLYPRNFIRT 130

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------KVIISLVGERGR 200
           GI  ID    L  GQ++ +F+G G+  + L +   R             V+ + +G +  
Sbjct: 131 GISAIDGLITLIRGQKLPIFSGDGLPHNELAAQIVRQAGISGEESGKFAVVFAAMGIKHD 190

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
           E   F+  +    +   VV+     + P++ R + P  A+T AEY + + D +VL+I+  
Sbjct: 191 EADFFVRSFEEAGVMDRVVMFVNLADDPVVERIITPRCALTAAEYLAFECDMHVLVIMTD 250

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +T +  ++REI++   E+P  +GYP  ++S+L  L ER G      G+IT +  + +  D
Sbjct: 251 MTSYCDALREISSAREEVPSRKGYPGYMYSDLASLYERAGILRGSGGSITQIPILTMPND 310

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLV 373
           +   PI D    I +G IVL+R+L + G YPP+D L S+SRL      +     D   L 
Sbjct: 311 DITHPIPDLTGYITEGQIVLSRALYQLGIYPPIDVLPSLSRLMKDGIGSEYTREDHPDLA 370

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
           + +     R +E R +  + G
Sbjct: 371 NQIFAAYSRVQEVRALAQVIG 391


>gi|269792130|ref|YP_003317034.1| H(+)-transporting two-sector ATPase [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099765|gb|ACZ18752.1| H(+)-transporting two-sector ATPase [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 455

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 156/304 (51%), Gaps = 18/304 (5%)

Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160
           GR  N +G+PIDG   + G   +S+  +   P A   +R  + F  TGI  ID  T L  
Sbjct: 88  GRTFNGIGEPIDGCGPVYGGKRVSVNGLPLNPVA---RRYPRNFIHTGISAIDTLTTLIR 144

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-----DCFDKVIISLVGERGREVREFIEDYLGDNLK 215
           GQ++ +F+G+G+  + L    A       D    V  + +G +  +   F+ +       
Sbjct: 145 GQKLPIFSGNGLPHNRLAVQIATQSRIVGDESFAVCFAGIGIKHDDAAFFMRELSQRGRN 204

Query: 216 KSVVVVATSDESPILRKMA-PLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273
            ++V      + P++ ++A P  A+T AEY + + G +VL+I+  +T +  ++RE+   +
Sbjct: 205 ANMVTFLNLADDPVIERIATPRMALTTAEYLAFELGMHVLVIITDMTNYCEALRELGVAA 264

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE+P  +GYP+ ++S+L  L ER G  +   G++T +  + +  D+   PI D    I +
Sbjct: 265 GEVPSRKGYPSYLYSDLASLYERAGVLKDRPGSVTQLPILTMPNDDITHPIPDLTGFITE 324

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDI 389
           G IVL+R L  +G YPP+D L S+SRL      K ++ ++   ++S   L   +   +D+
Sbjct: 325 GQIVLSRELNSKGIYPPIDVLTSLSRLMKDGIGKGYTREDHPNLAS--QLFASYSRVQDV 382

Query: 390 RLIG 393
           R + 
Sbjct: 383 RALA 386


>gi|330723653|gb|AEC46023.1| F0F1 ATP synthase subunit beta [Mycoplasma hyorhinis MCLD]
          Length = 464

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 167/331 (50%), Gaps = 19/331 (5%)

Query: 77  IGEEISLGDLVFHWGRFRISPSACWCGRVINAL-GKPIDGDDSLGKGDLSMEIMSKVPPA 135
           +  EI + D+V +  R  + P        I +  GKP+     L   + +  +  +V   
Sbjct: 56  LSSEIKINDVVTNTKRSFVVPVGKNSKNNIYSFEGKPL-----LTNRNANSPLYVEVDST 110

Query: 136 MNRQRV----EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
           +N+ R      +  +TGI+ ID F P+  G ++G+F G+G+GK+ L+     +   DK  
Sbjct: 111 INKSRFFDVQAEVIQTGIKAIDFFIPIIKGFKLGIFGGAGVGKTVLMKEIIFNVNKDKKS 170

Query: 192 ISLV----GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           IS +    GER RE  E   +    NL K S + ++  +ESP  R       +T AEY  
Sbjct: 171 ISNIFIGSGERSREAIELFNELESSNLMKNSSMYISKMNESPGARMSIVPIGITAAEYLR 230

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             + ++VLL +D+I RF  +  E++ + G+ P   GY +++ S++  + ER+   + + G
Sbjct: 231 DYEKEDVLLFIDNIYRFVQAENEVSASLGKKPSVGGYQSTLDSDVASVQERL--FKNQNG 288

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364
            IT+  ++ +  D+ +DP A +V + LDG +VL+R  + +  +P  DPLAS S  + +K 
Sbjct: 289 AITSFQTIFLPMDDLSDPSAVAVFNHLDGKLVLSREQSSKNIFPAFDPLASSSNSVNEKI 348

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
                   +     ++ +++E  D+ LI G+
Sbjct: 349 IGKKHFNAIIEAKKILAKYKELEDVILILGF 379


>gi|149384813|gb|ABR25215.1| ATP synthase beta chain [Thelypteris reticulata]
          Length = 421

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|153005423|ref|YP_001379748.1| V-type ATP synthase subunit B [Anaeromyxobacter sp. Fw109-5]
 gi|167016626|sp|A7HDG8|VATB_ANADF RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|152028996|gb|ABS26764.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Anaeromyxobacter sp. Fw109-5]
          Length = 460

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 152/316 (48%), Gaps = 27/316 (8%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP----AMNRQRVEKG---FKTGIR 150
           S    GRV++ LG+P DG        L   I     P    A+N  R EK     +TG+ 
Sbjct: 85  SRGMLGRVLDGLGRPTDG--------LPAPIAEARLPIHGAALNVTRREKPADFIETGVS 136

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF---ARSDCFDK--VIISLVGERGREVREF 205
            ID    L  GQ++ VF+ +G+    L       AR    ++  V+ + +G   RE   +
Sbjct: 137 AIDGLNTLVRGQKLPVFSCAGLPAGRLAGQIVCQARVRGGERFAVVFAAMGAPFREYDAY 196

Query: 206 IEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263
           +E +     L ++ V +  +++ PI R M P  A+T AE+ + S G +VL++L  +T + 
Sbjct: 197 LEAFRRAGVLDRTAVFLNRAEDPPIERLMTPRCALTCAEHLAFSHGLHVLVVLTDMTSYC 256

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            ++RE+A    E+P  RGYP  ++++L  + ER G      G+IT V  + +  D+   P
Sbjct: 257 EALREVALARDEVPGRRGYPGYMYTDLATIYERAGRIAGRPGSITQVPVLTMPDDDLTHP 316

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTH 378
           I D    I +G IVL+R L   G YPP+D L S+SRL           AD + L   L  
Sbjct: 317 IPDLSGYITEGQIVLSRELDRRGVYPPIDVLPSLSRLMGLGAGPGRTRADHRPLADQLYA 376

Query: 379 LIHRFEETRDIRLIGG 394
           L  R  + R +  I G
Sbjct: 377 LYARGRDVRRMAAIVG 392


>gi|42558360|gb|AAS19889.1| ATP synthase beta chain [Lellingeria apiculata]
          Length = 422

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|156739814|gb|ABU93560.1| ATP synthase beta subunit [Tectaria yunnanensis]
          Length = 394

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA N+   +   F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSATFPIHRSGPAFNQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|112791390|gb|ABI21965.1| ATP synthase beta subunit [Brenneria quercina]
          Length = 421

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 16/304 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++N LG+P+D      KGD+  E    I  + P   +    ++  +TGI+VID+ 
Sbjct: 58  ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHREAPVYEDLSNSQELLETGIKVIDLM 112

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212
            P   G ++G+  G+G+GK+  +    R+   +     + + VGER RE  +F  +    
Sbjct: 113 CPFAKGGKVGLLGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSES 172

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N L K  +V    +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++ 
Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + 
Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390
           LD  +VL+R +A  G YP VDPL S SR  D      E   V+  +  ++ R++E +DI 
Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350

Query: 391 LIGG 394
            I G
Sbjct: 351 AILG 354


>gi|91202294|emb|CAJ75354.1| strongly similar to ATPD gene encoding subunit beta of ATP synthase
           [Candidatus Kuenenia stuttgartiensis]
          Length = 462

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 150/308 (48%), Gaps = 19/308 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GR+ N  G+ ID  + L +  +   I        +R    + F TGI+ I
Sbjct: 81  LRVPLGKELLGRMFNVFGETIDNGEPL-RDVVWKSIYQPTISLSSRSVSTEIFSTGIKAI 139

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI-----ISL---VGERGREVRE 204
           D+  PL  G + G+F G+G+GK+ L++     +   KV+     +S    +GER RE  +
Sbjct: 140 DVLAPLERGGKAGLFGGAGVGKTVLIT-----EIIHKVMGIYGGVSFFCGIGERCREAED 194

Query: 205 -FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262
            F E      L  +V++    +E P  R      A+ +AEYF   +  +VLL++D+I RF
Sbjct: 195 LFREIKAAGVLDNTVMLFGQMNEPPGARFRIGHAALRMAEYFRDEEKQDVLLLIDNIFRF 254

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G+LP   GY  ++ +EL  L ERI       G+IT+V +V V  D+  D
Sbjct: 255 IQAGSEVSGLLGQLPSRVGYQPTLGTELSELQERI--CSTSSGSITSVQAVYVPADDFTD 312

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P A    S L   IVL+R  A EG YP +DPL S S+ L          ++   +  ++ 
Sbjct: 313 PSAVHTFSHLSATIVLSRKRASEGLYPAIDPLQSGSKMLMPHIVGKKHYQIAREILKILA 372

Query: 382 RFEETRDI 389
            +EE +DI
Sbjct: 373 NYEELKDI 380


>gi|21264379|sp|O03074|ATPB_MICPL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|6724295|gb|AAB51740.2| ATP synthase beta chain [Microlepia platyphylla]
          Length = 395

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + + +    I    P           F+TGI+V D+  P   G
Sbjct: 7   LGRISNVLGEPVDNPGPV-QSNTIFPIHRSAPAFTQLDTKLSIFETGIKVADLLAPYRRG 65

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           
Sbjct: 66  GKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 125

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 126 NISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNILRFVQAGSEV 185

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP   +  
Sbjct: 186 SALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAPATTS 243

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++E +
Sbjct: 244 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYKELQ 302

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 303 DIIAILG 309


>gi|149798643|gb|ABR32012.1| ATP synthase beta chain [Adiantum malesianum]
          Length = 385

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 155/307 (50%), Gaps = 24/307 (7%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVQNSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +          
Sbjct: 58  KIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 116

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 117 NLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEV 176

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 177 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 234

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 235 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 293

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 294 DIIAILG 300


>gi|42558306|gb|AAS19862.1| ATP synthase beta chain [Ceradenia aulaeifolia]
          Length = 422

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNLSESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|71894476|ref|YP_278584.1| F0F1 ATP synthase subunit beta [Mycoplasma synoviae 53]
 gi|71851264|gb|AAZ43873.1| ATP synthase beta chain [Mycoplasma synoviae 53]
          Length = 452

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 160/328 (48%), Gaps = 16/328 (4%)

Query: 75  VGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           + IG+EI + +  FH     +S      G + + LG  +   +      + M   S +  
Sbjct: 59  LAIGQEIQVLNHSFHVPVGNLSK-----GHIYDILGNNLSSPEITNVTKVEMN--STIKN 111

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
             N  +  +   TGI+ ID F P+  G +IG+F G+G+GK+ L+     +    K   S 
Sbjct: 112 NTNYTKKHQLLVTGIKAIDFFVPIFEGDKIGIFGGAGVGKTVLMKEIIFNLSKQKENTSA 171

Query: 195 V----GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSK 248
           +    GER RE  E   D    NL K SV+ V+  +E+P  R       +T AEY   + 
Sbjct: 172 IFIGSGERSREAIELYNDLSESNLMKNSVMYVSRMNENPGARMSIVPVGITAAEYLRDNN 231

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
            +NVLL +D+I RF  +  E+A +  + P   GY  ++ +E+ +  +R+     E G+IT
Sbjct: 232 KENVLLFIDNIFRFLQAGNEVAASLDKKPSIGGYQATLNTEISQAEQRL--FNNENGSIT 289

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +  +V +  D+ +DP A +V + L+  +VL+R ++ +  +P  DPL S S   +  +   
Sbjct: 290 SFQTVFLPMDDLSDPSAVAVFNHLNSSLVLSREISAKNIFPAFDPLVSSSNNVNPEFIGQ 349

Query: 369 EK-KLVSSLTHLIHRFEETRDIRLIGGY 395
                +    +++ +++E  D+ LI G+
Sbjct: 350 RHYNAILETKYILQKYKEIEDVMLILGF 377


>gi|325662876|ref|ZP_08151445.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086601|ref|ZP_08335679.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325470928|gb|EGC74157.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330410434|gb|EGG89866.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 460

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 174/368 (47%), Gaps = 27/368 (7%)

Query: 42  YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISP 97
           Y  + +FVV    N   +G+++ I  D   I      E +SL +    L  H     +SP
Sbjct: 26  YEEIVEFVVE--GNQKKIGRIVEIYEDKAVIQVFEGTENMSLTNTHTKLTGHPMEVALSP 83

Query: 98  SACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                GR  N +G+PID    LG     L   I       + R+      +TGI  ID  
Sbjct: 84  D--MLGRTFNGIGEPID---DLGPITSTLRRNINGLPLNPVKREYPRNYIRTGISAIDGL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIED 208
           T L  GQ++ +F+G+G+    L +   +       SD    ++ + +G +      F   
Sbjct: 139 TTLIRGQKLPIFSGNGLPHDQLAAQIVKQASLGDDSDEQFAIVFAAMGVKHDVAEFFRRT 198

Query: 209 YLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
           +    +   V +       P++ ++  P  A+T+AEY +  K  ++L+IL  +T FA ++
Sbjct: 199 FEESGVADHVAMFLNLANDPVVERLITPKVALTVAEYLAFEKNMHILVILTDMTSFAEAM 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++++ GE+P  +G+P  ++SEL  + ER G  E   G++T +  + +  D+   PI D
Sbjct: 259 REVSSSKGEIPSRKGFPGYLYSELATIYERAGIVEGVNGSVTQLPILTMPNDDITHPIPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWS-ADEKKLVSSLTHLIH 381
               I +G IVL+R+L  +  YPP++ L S+SRL      K ++  D + L + L     
Sbjct: 319 LTGYITEGQIVLDRNLHGQSVYPPINILPSLSRLMKDGIGKGYTREDHQDLANQLFSSYA 378

Query: 382 RFEETRDI 389
           +  E R++
Sbjct: 379 KVGEARNL 386


>gi|159227440|emb|CAJ80511.1| ATP synthase beta subunit [Physalis sp. P108]
          Length = 336

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 151/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTAPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|312984748|gb|ADR30624.1| ATP synthase beta chain [Lellingeria hartii]
          Length = 419

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPIQSSAISP--IHRSAPAFTQLDTKLCIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|11908163|gb|AAD11741.2| ATP synthase beta subunit [Amaroria soulameoides]
          Length = 433

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 46  GATXGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 102

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 103 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 162

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + N+LL +D+I  F  
Sbjct: 163 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEXNLLLFIDNIFXFVQ 222

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L +RI  +   +G+IT++ +V V  D+  DP 
Sbjct: 223 AGSEVSALLGXMPSAVGYHPTLSTEMGSLXQRI--TSTXEGSITSIQAVYVPADDLTDPA 280

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
                + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 281 PAXTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 340

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 341 KELQDIIAILG 351


>gi|282164961|ref|YP_003357346.1| A-type ATP synthase subunit B [Methanocella paludicola SANAE]
 gi|282157275|dbj|BAI62363.1| A-type ATP synthase subunit B [Methanocella paludicola SANAE]
          Length = 466

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 142/286 (49%), Gaps = 11/286 (3%)

Query: 86  LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           ++F     RI  S    GRV N +GK  DG   +   D  ++I         R +     
Sbjct: 76  VIFTGEPARIDVSKDMLGRVFNGVGKARDGGPEIIPED-RLDIGGAAINPFARDKPSDFI 134

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGER 198
           +TGI  ID    L  GQ++ +F GSG+  + L +  AR        + F  VI   +G  
Sbjct: 135 QTGISAIDGLNTLVRGQKLPIFTGSGLPANKLAAQIARQAKVLGEGESF-AVIFVAMGIT 193

Query: 199 GREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLIL 256
            +E   F++D+     L++ V  +  +D+  I R   P  A+T AEY +   D +VL+IL
Sbjct: 194 HKEASYFMKDFERTGALERVVFFMNLADDPTIERIATPRCALTAAEYLAFTHDLHVLVIL 253

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
             +  +  ++REI+T   E+P  RGYP  ++++L  + ER G  + +KG+IT +  + + 
Sbjct: 254 TDMINYCEALREISTAREEVPGRRGYPGYMYTDLASIYERAGRIKGKKGSITQIPILTMP 313

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            D+   P+ D    I +G IVL+R +   G  PPVD L  +SRL +
Sbjct: 314 DDDITHPVPDLTGYITEGQIVLSRDMFRRGSDPPVDCLPCLSRLMN 359


>gi|261253523|ref|ZP_05946096.1| ATP synthase alpha chain [Vibrio orientalis CIP 102891]
 gi|260936914|gb|EEX92903.1| ATP synthase alpha chain [Vibrio orientalis CIP 102891]
          Length = 513

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 32/330 (9%)

Query: 80  EISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDL----SMEIMSKVPP 134
           ++S G  V   GR    P      GRV+N LG+PIDG   LG+ D     ++EI++  P 
Sbjct: 81  DLSEGMTVMGTGRILEVPVGPELLGRVVNTLGQPIDG---LGQIDAKQYNAVEIIA--PG 135

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVII 192
            ++R+ V+   +TG + +D   P+  GQR  V      GK+ L   ++  + D   K I 
Sbjct: 136 VIDRKSVDTPIQTGYKAVDSMVPIGRGQRELVIGDRQTGKTALAIDAIINQKDSGVKSIY 195

Query: 193 SLVGERGRE----VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
             +G++       VR+  E    D LK ++VVVA++ ES  L+ +AP    T+ EYF  +
Sbjct: 196 VAIGQKASTIANVVRKLAEH---DALKNTIVVVASASESAALQYLAPYAGCTMGEYFRDR 252

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI----------- 297
           G++ L++ D +++ A + R+I+      P    +P  VF    RLLER            
Sbjct: 253 GEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEAYVERL 312

Query: 298 --GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G  + + G++TA+  +     + +  +  +V SI DG I L   L   G  P VDP  
Sbjct: 313 TNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTQLFNSGLRPAVDPGI 372

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SVSR+   A +   KKL   +   + ++ E
Sbjct: 373 SVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|14717929|gb|AAK72707.1| ATP synthase beta subunit [Albizia julibrissin]
          Length = 384

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGXVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365


>gi|20269440|gb|AAM17947.1| ATP synthase beta subunit [Styrax officinalis]
          Length = 488

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    L A+ + EYF    D +VLL + +I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLXALPMXEYFRDVXDQDVLLFIANIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPFAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|312984822|gb|ADR30661.1| ATP synthase beta chain [Lellingeria suspensa]
          Length = 419

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|290745847|gb|ADD51593.1| ATP synthase beta chain [Lellingeria subsessilis]
 gi|290745849|gb|ADD51594.1| ATP synthase beta chain [Lellingeria sp. MAS-2010]
          Length = 411

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|148886605|sp|Q4AAV9|ATPA_MYCHJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|144227444|gb|AAZ44141.2| ATP synthase alpha chain [Mycoplasma hyopneumoniae J]
          Length = 507

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 155/324 (47%), Gaps = 11/324 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+NALG PIDG   L    L   I +  P  M+R+ V++G KTGI  ID   P+  G
Sbjct: 103 LGRVVNALGIPIDGKAEL-DNSLKSAIFTNAPSIMDRKSVDRGLKTGILAIDSLVPIGKG 161

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+T+   ++  +       +   +G++   V + +        L+ + 
Sbjct: 162 QRELIIGDRQTGKTTIAIDAILNQKGKDVYCVYVAIGQKNSSVAQIVSLLEKKGALEYTT 221

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V++A + E   L+ +AP +   IAEY+ +K  +VL+I D +++ A + R ++      P 
Sbjct: 222 VILAGASELSPLQYLAPYSGAAIAEYWMNKKKDVLIIYDDLSKHAIAYRTLSLLLRRPPG 281

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  +F +   LLER      +K  G+ITA+  +     + +  I  +V SI DG I
Sbjct: 282 REAFPGDIFYQHSYLLERSAQLSNDKGGGSITALPIIETQAGDISAYIPTNVISITDGQI 341

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-Y 395
            L  SL   G+ P +D   SVSR+   A +   K   SSL   + ++ E +     G   
Sbjct: 342 FLRDSLFNSGQKPAIDIGLSVSRVGSAAQTNLMKWASSSLKLNLAQYNELKAFAQFGSDL 401

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
            P   LILD+       IY+ LKQ
Sbjct: 402 GPSSQLILDRGNK----IYEILKQ 421


>gi|3850956|gb|AAC72170.1| ATP synthase beta subunit [Xylomelum scottianum]
          Length = 490

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMS-KVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D        +  PA  +   +   F+TGI+  D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDXXXXXXXXRSAPAFIQLDTKLSIFETGIKXXDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|237736348|ref|ZP_04566829.1| F0F1 ATP synthase subunit alpha [Fusobacterium mortiferum ATCC
           9817]
 gi|229421390|gb|EEO36437.1| F0F1 ATP synthase subunit alpha [Fusobacterium mortiferum ATCC
           9817]
          Length = 500

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 164/335 (48%), Gaps = 11/335 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   GR    P+     GRV+NALG+PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGDFSLIKEGDEVKATGRVVSVPAGEAMLGRVVNALGEPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +  MEI  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-KPEKYMEIERKASGIISRKPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNLKKSVVVVATSDESPILRK 232
              ++  +     K I   +G++   V +    +ED     ++ + +V AT+ E+  L+ 
Sbjct: 179 AIDAIINQKGTGVKCIYVAIGQKRSTVAQIYKKLED--AGAMEYTTIVAATASEAAPLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           MAP + V + EYF  KG++VL+I D +++ A + RE++      P    YP  VF    R
Sbjct: 237 MAPYSGVAMGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHSR 296

Query: 293 LLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER    S+K   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 297 LLERAAKLSDKLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A     K++ + +   + ++ E
Sbjct: 357 INAGISVSRVGGSAQIKAMKQVAAKVKLELAQYNE 391


>gi|224830498|gb|ACN66344.1| ATP synthase beta chain [Chasmanthera dependens]
          Length = 483

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK  L+    +  A++     V   +  ER RE  +   +    
Sbjct: 149 PYRRGGKIGLFGGAGVGKXVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 207

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 208 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 267

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 325

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 385

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 386 YKELQDIIAILG 397


>gi|312984768|gb|ADR30634.1| ATP synthase beta chain [Lellingeria melanotrichia]
          Length = 403

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|42558370|gb|AAS19894.1| ATP synthase beta chain [Lellingeria subsessilis]
          Length = 422

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|46360671|gb|AAS89117.1| ATP synthase beta subunit [Haplomitrium blumei]
          Length = 266

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 142/270 (52%), Gaps = 21/270 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D  M   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---DLGPVDTGMTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 117

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 118 NEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 177

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           +  + LD   VL+R LA +G YP VDPL S
Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDS 265


>gi|71893406|ref|YP_278852.1| F0F1 ATP synthase subunit alpha [Mycoplasma hyopneumoniae J]
          Length = 508

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 155/324 (47%), Gaps = 11/324 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+NALG PIDG   L    L   I +  P  M+R+ V++G KTGI  ID   P+  G
Sbjct: 104 LGRVVNALGIPIDGKAEL-DNSLKSAIFTNAPSIMDRKSVDRGLKTGILAIDSLVPIGKG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+T+   ++  +       +   +G++   V + +        L+ + 
Sbjct: 163 QRELIIGDRQTGKTTIAIDAILNQKGKDVYCVYVAIGQKNSSVAQIVSLLEKKGALEYTT 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V++A + E   L+ +AP +   IAEY+ +K  +VL+I D +++ A + R ++      P 
Sbjct: 223 VILAGASELSPLQYLAPYSGAAIAEYWMNKKKDVLIIYDDLSKHAIAYRTLSLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  +F +   LLER      +K  G+ITA+  +     + +  I  +V SI DG I
Sbjct: 283 REAFPGDIFYQHSYLLERSAQLSNDKGGGSITALPIIETQAGDISAYIPTNVISITDGQI 342

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-Y 395
            L  SL   G+ P +D   SVSR+   A +   K   SSL   + ++ E +     G   
Sbjct: 343 FLRDSLFNSGQKPAIDIGLSVSRVGSAAQTNLMKWASSSLKLNLAQYNELKAFAQFGSDL 402

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419
            P   LILD+       IY+ LKQ
Sbjct: 403 GPSSQLILDRGNK----IYEILKQ 422


>gi|149384721|gb|ABR25169.1| ATP synthase beta chain [Pleopeltis polypodioides]
          Length = 426

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|254302781|ref|ZP_04970139.1| F-type two-sector ATPase, F(1) alpha subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322973|gb|EDK88223.1| F-type two-sector ATPase, F(1) alpha subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 500

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVINALG PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGENLLGRVINALGDPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + + D  M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-RADKYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V + I   L D   +  +++V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQDVKCIYVAIGQKRSTVAQ-IYKKLSDLGCMDYTIIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 391


>gi|148975562|ref|ZP_01812433.1| F0F1 ATP synthase subunit alpha [Vibrionales bacterium SWAT-3]
 gi|145964990|gb|EDK30241.1| F0F1 ATP synthase subunit alpha [Vibrionales bacterium SWAT-3]
          Length = 513

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 177/382 (46%), Gaps = 35/382 (9%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           + +NLD   +  V +G  I L  G  V   GR    P      GRV+N LG+PIDG    
Sbjct: 62  LALNLDTHSVGAVVMGPYIDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPIDG---- 117

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG +S + +  V    P  + R+ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 118 -KGPVSCDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQAGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPIL 230
            L   ++  + D   K +   +G++   +   +   E++  D LK ++VVVA++ ES  L
Sbjct: 177 ALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEH--DALKNTIVVVASASESAAL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF   
Sbjct: 235 QYLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLH 294

Query: 291 PRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            RLLER              G  + + G++TA+  +     + +  +  +V SI DG + 
Sbjct: 295 SRLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVF 354

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L   G  P VDP  SVSR+   A     KKL   +   + ++   R++     +  
Sbjct: 355 LQTQLFNAGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQY---RELAAFAQFSS 411

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
            +D +  K +     + + +KQ
Sbjct: 412 DLDEMTRKQLDHGERVTELMKQ 433


>gi|63253155|dbj|BAD98340.1| beta subunit of ATP synthesis [Araiostegia pulchra]
          Length = 464

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G
Sbjct: 105 LGRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 163

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +   
Sbjct: 164 GKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINE 222

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 399

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 400 QDIIAILG 407


>gi|20467407|gb|AAL27834.1| ATPase beta subunit [Chamaecyparis pisifera]
          Length = 334

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 146/285 (51%), Gaps = 21/285 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148
           G   +       GR+ N LG+P+D   +LG  D L+   + +  PA  +   +   F+TG
Sbjct: 53  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETG 109

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +   R RE  +
Sbjct: 110 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-XRTREGND 168

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
             ++     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 169 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 228

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 229 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 286

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 287 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 331


>gi|282882881|ref|ZP_06291486.1| V-type ATP synthase alpha chain 2 [Peptoniphilus lacrimalis 315-B]
 gi|300814145|ref|ZP_07094428.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|281297292|gb|EFA89783.1| V-type ATP synthase alpha chain 2 [Peptoniphilus lacrimalis 315-B]
 gi|300511802|gb|EFK39019.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 590

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 139/283 (49%), Gaps = 19/283 (6%)

Query: 131 KVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           +VP P + R  + K   TG R+ D+F PL  G    +  G G GK+      A+    D 
Sbjct: 195 RVPRPCLERLPINKLLVTGQRIFDVFFPLAKGGTTAIPGGFGTGKTMTQHQIAKYCDADI 254

Query: 190 VIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTI 241
           ++    GERG E+ E +ED+        G  L    +++A +   P+  + A + T VTI
Sbjct: 255 IVYIGCGERGNEMTEVLEDFPKLMDPNTGKPLMARTILIANTSNMPVAAREASIYTGVTI 314

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +V L+ DS +R+A ++REI+    E+P   GYP  + S +    ER G  E
Sbjct: 315 AEYFRDQGYHVALMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRVAEFYERAGYVE 374

Query: 302 K---EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++T + +V   G + ++P+ ++ +  ++  I L++ LA    YP ++ + S S
Sbjct: 375 SFSGHEGSVTLIGAVSPAGGDFSEPVTENTKRFVNVFIALDKDLAYARHYPAINWMNSYS 434

Query: 359 RLADK-------AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +  D            D  KL +    L+H+  +  +I ++ G
Sbjct: 435 QYNDALKNYYDINLDGDLPKLKNKFLDLLHQEAKLNEIVMLVG 477


>gi|104773793|ref|YP_618773.1| F0F1 ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|118573479|sp|Q1GAW7|ATPA_LACDA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|103422874|emb|CAI97536.1| H+ transporting ATPase / ATP synthase, alpha subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 503

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 164/355 (46%), Gaps = 20/355 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + + Q   S+++G +I           +G  ++I  GD V   GR    P      GR
Sbjct: 58  GAYGIAQNLESNDVGIII-----------LGKFDDIREGDRVKRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVV 220
            V      GK++L +         D + I + +G++   VR  +E    LG      VV 
Sbjct: 166 LVIGDRKTGKTSLAIDTILNQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVE 225

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              S+ +P+L  +AP + + + E F   G +VL++ D +++ A + RE++      P   
Sbjct: 226 AGPSEPAPMLY-IAPYSGIAMGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGRE 284

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            YP  VF    RLLER     KE   G++TA+  +  +  + +  I  +V SI DG I L
Sbjct: 285 AYPGDVFYLHSRLLERSAKLSKELGGGSLTALPVIQTEAGDISAYIPTNVISITDGQIFL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              +   G  P +D  ASVSR+   A     KK+  +L   +  + E       G
Sbjct: 345 QSDMFFSGTRPAIDAGASVSRVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG 399


>gi|46360645|gb|AAS89104.1| ATP synthase beta subunit [Allisonia cockaynii]
          Length = 382

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVNSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 118

Query: 212 -DNLKKSVVVVATS--DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  A    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  
Sbjct: 119 EQNISESKVAPAYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSTTSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|14718183|gb|AAK72830.1| ATP synthase beta subunit [Pinguicula lutea]
          Length = 380

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 143/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPID---NLGPVDTXTTSPIHRSAPAFIQLDTKLXIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNZQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359


>gi|21667284|gb|AAM74009.1| ATP synthase beta chain [Adenophorus periens]
 gi|21667302|gb|AAM74018.1| ATP synthase beta chain [Adenophorus tripinnatifidus]
          Length = 422

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|257470709|ref|ZP_05634799.1| F0F1 ATP synthase subunit alpha [Fusobacterium ulcerans ATCC 49185]
 gi|317064914|ref|ZP_07929399.1| ATP synthase F1 sector subunit alpha [Fusobacterium ulcerans ATCC
           49185]
 gi|313690590|gb|EFS27425.1| ATP synthase F1 sector subunit alpha [Fusobacterium ulcerans ATCC
           49185]
          Length = 500

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 165/335 (49%), Gaps = 11/335 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   GR    P+     GRV+NALG+PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGDFSLIKEGDEVRATGRVVSVPAGESLLGRVVNALGEPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +  MEI  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-KAEKYMEIERKASGIISRKPVFEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNLKKSVVVVATSDESPILRK 232
              ++  +     K I   +G++   V +    +ED     ++ + +V AT+ E+  L+ 
Sbjct: 179 AIDAILNQKGTGVKCIYVAIGQKRSTVAQIYKKLED--AGAMEYTTIVAATASEAAPLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           MAP + V++ EYF  KG++VL++ D +++ A + RE++      P    YP  VF    R
Sbjct: 237 MAPYSGVSMGEYFLDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHSR 296

Query: 293 LLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER    S+K   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 297 LLERAAKLSDKLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A     K++ S +   + ++ E
Sbjct: 357 INAGISVSRVGGSAQIKAMKQVASKVKLELAQYTE 391


>gi|290745889|gb|ADD51613.1| ATP synthase beta chain [Terpsichore anfractuosa]
          Length = 388

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|17933338|gb|AAL48249.1| ATP synthase beta subunit [Linospadix longicruris]
          Length = 493

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 99  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    L A+T+AEYF    + +VLL +D+I RF  
Sbjct: 216 VINEKNIAESKVALVYGQMNEPPGARMRVGLIALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 334 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 393

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 394 KELQDIIAILG 404


>gi|21667306|gb|AAM74020.1| ATP synthase beta chain [Terpsichore eggersii]
          Length = 422

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG   + ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVQNSAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|116513799|ref|YP_812705.1| F0F1 ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275431|sp|Q04BA5|ATPA_LACDB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116093114|gb|ABJ58267.1| ATP synthase F1 subcomplex alpha subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
          Length = 503

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 164/355 (46%), Gaps = 20/355 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + + Q   S+++G +I           +G  ++I  GD V   GR    P      GR
Sbjct: 58  GAYGIAQNLESNDVGIII-----------LGKFDDIREGDRVKRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVV 220
            V      GK++L +         D + I + +G++   VR  +E    LG      VV 
Sbjct: 166 LVIGDRKTGKTSLAIDTILNQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVE 225

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              S+ +P+L  +AP + + + E F   G +VL++ D +++ A + RE++      P   
Sbjct: 226 AGPSEPAPMLY-IAPYSGIAMGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGRE 284

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            YP  VF    RLLER     KE   G++TA+  +  +  + +  I  +V SI DG I L
Sbjct: 285 AYPGDVFYLHSRLLERSAKLSKELGGGSLTALPVIQTEAGDISAYIPTNVISITDGQIFL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              +   G  P +D  ASVSR+   A     KK+  +L   +  + E       G
Sbjct: 345 QSDMFFSGTRPAIDAGASVSRVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG 399


>gi|312984792|gb|ADR30646.1| ATP synthase beta chain [Lellingeria prionodes]
          Length = 409

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 21  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLCIFETGIKVVDLLAPYRR 78

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 79  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 138

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 139 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 198

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 199 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 256

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 257 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 315

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 316 QDIIAILG 323


>gi|312984722|gb|ADR30611.1| ATP synthase beta chain [Lellingeria sp. PHL-2010a]
 gi|312984724|gb|ADR30612.1| ATP synthase beta chain [Lellingeria sp. PHL-2010a]
 gi|312984726|gb|ADR30613.1| ATP synthase beta chain [Lellingeria apiculata]
 gi|312984728|gb|ADR30614.1| ATP synthase beta chain [Lellingeria apiculata]
 gi|312984738|gb|ADR30619.1| ATP synthase beta chain [Lellingeria ciliolepis]
 gi|312984740|gb|ADR30620.1| ATP synthase beta chain [Lellingeria depressa]
 gi|312984742|gb|ADR30621.1| ATP synthase beta chain [Lellingeria dissimulans]
 gi|312984752|gb|ADR30626.1| ATP synthase beta chain [Lellingeria hildebrandtii]
 gi|312984756|gb|ADR30628.1| ATP synthase beta chain [Lellingeria itatimensis]
 gi|312984760|gb|ADR30630.1| ATP synthase beta chain [Lellingeria sp. PHL-2010c]
 gi|312984782|gb|ADR30641.1| ATP synthase beta chain [Lellingeria oosora]
 gi|312984788|gb|ADR30644.1| ATP synthase beta chain [Lellingeria phlegmaria]
 gi|312984800|gb|ADR30650.1| ATP synthase beta chain [Lellingeria randallii]
 gi|312984804|gb|ADR30652.1| ATP synthase beta chain [Ctenopteris subimpressa]
 gi|312984810|gb|ADR30655.1| ATP synthase beta chain [Lellingeria suprasculpta]
 gi|312984812|gb|ADR30656.1| ATP synthase beta chain [Lellingeria suspensa]
 gi|312984814|gb|ADR30657.1| ATP synthase beta chain [Lellingeria suspensa]
 gi|312984816|gb|ADR30658.1| ATP synthase beta chain [Lellingeria suspensa]
 gi|312984818|gb|ADR30659.1| ATP synthase beta chain [Lellingeria suspensa]
 gi|312984820|gb|ADR30660.1| ATP synthase beta chain [Lellingeria suspensa]
          Length = 419

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|322436135|ref|YP_004218347.1| alternate F1F0 ATPase, F1 subunit beta [Acidobacterium sp.
           MP5ACTX9]
 gi|321163862|gb|ADW69567.1| alternate F1F0 ATPase, F1 subunit beta [Acidobacterium sp.
           MP5ACTX9]
          Length = 490

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 138/266 (51%), Gaps = 14/266 (5%)

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           PP  +R    + F+TGI+ ID+  PL  G + G+F G+G+GK+ LL+    +    +  +
Sbjct: 120 PPLSDRLTKSEVFQTGIKAIDVLVPLERGGKAGLFGGAGVGKTVLLTEMIHNMIGHQKGM 179

Query: 193 SL---VGERGREVREFIEDYLGDN----LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
           S+   +GER RE  E    Y G      LK  V+V    +E P  R      A+T+AEYF
Sbjct: 180 SIFCGIGERCREGEEL---YSGMKDAGVLKDMVMVYGQMNEPPGARFRVGHAALTMAEYF 236

Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
              +  +VL ++D+I RF  +  E++   G++P   GY +++ +EL  L ERI  +    
Sbjct: 237 RDDEHRDVLFLVDNIFRFLQAGMEVSGLLGQMPSRLGYQSTMGTELSGLEERI--ANTHA 294

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G IT++ +V V  D+  DP A+ V   L   +VL+R  A EG YP +D L S S +A  A
Sbjct: 295 GAITSIQAVYVPADDLTDPAAEHVFGHLSASLVLSRKRASEGLYPAIDLLQSNSAMATSA 354

Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389
              +   ++   +   +  +E  +DI
Sbjct: 355 IVGERHYRVAQQIRKTLAEYEALKDI 380


>gi|56112411|gb|AAV71160.1| ATP synthase subunit B [Phyllanthus virgatus]
          Length = 324

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 170

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 171 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 230

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 231 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 288

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 289 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 324


>gi|16943743|emb|CAD10756.1| ATP synthase, beta subunit [Iphigenia indica]
          Length = 488

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 155/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +         +TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSILETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 210

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 211 GVINEKNITDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 268

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 269 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 326

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
           DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +    
Sbjct: 327 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTS 386

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 387 QRYKELQDIIAILG 400


>gi|149384449|gb|ABR25047.1| ATP synthase beta chain [Stenochlaena tenuifolia]
          Length = 426

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|42558424|gb|AAS19921.1| ATP synthase beta chain [Terpsichore subtilis]
          Length = 422

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + +    I    P           F+TGI+V+D+  P  
Sbjct: 74  LGRIFNVLGEPVD---NLGPVRSNAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|167044944|gb|ABZ09610.1| putative ATP synthase alpha/beta family, nucleotide-binding domain
           protein [uncultured marine microorganism
           HF4000_APKG8D23]
          Length = 460

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 155/310 (50%), Gaps = 15/310 (4%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           FR+  S    GR++   GKP DG   +     +  + + + P   R   E   +TGI  I
Sbjct: 77  FRLPVSKDLIGRILAGNGKPRDGGPDIVPERYADIVGAAINPYSRRSPAEF-IQTGISAI 135

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFI 206
           D  T L  GQ++ +F+ SG+  + +    AR      S+    V+   +G    E   F+
Sbjct: 136 DCCTTLVRGQKLPIFSASGLPHNDIALQIARQARILGSEEEFVVVFCAMGITAEEYNFFV 195

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
            D      L K+V+ V  +D+  + R + P  A+T AEY + + D +VL+I   +T +  
Sbjct: 196 SDLERTGALDKAVLFVNLADDPAVERLITPRLALTAAEYLAFEHDYHVLVIYTDMTNYCE 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++R++     E+P  RGYP  ++++L  L ER G  +   G+IT    + + GD+   PI
Sbjct: 256 ALRQVGAAREEVPGRRGYPGYMYTDLAMLYERAGLVKGRSGSITQFPILTMPGDDITHPI 315

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLI 380
            D    I +G IV++R L ++G YPP++ L S+SRL +    +  + ++ K VS    + 
Sbjct: 316 PDLSGYITEGQIVISRELHQKGIYPPINVLPSLSRLMNAGIGEGHTREDHKSVSD--QMY 373

Query: 381 HRFEETRDIR 390
             + + R++R
Sbjct: 374 AAYAQGRELR 383


>gi|56112413|gb|AAV71161.1| ATP synthase subunit B [Phyllanthus niruri]
          Length = 324

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---ELGPVDTRTTSAIHRSAPAFIQLDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 170

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 171 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 230

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 231 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 288

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 289 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 324


>gi|253582460|ref|ZP_04859682.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
 gi|251835605|gb|EES64144.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
          Length = 500

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 165/335 (49%), Gaps = 11/335 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   GR    P+     GRV+NALG+PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGDFSLIKEGDEVRATGRVVSVPAGESLLGRVVNALGEPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +  MEI  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-KAEKYMEIERKASGIISRKPVFEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNLKKSVVVVATSDESPILRK 232
              ++  +     K I   +G++   V +    +ED     ++ + +V AT+ E+  L+ 
Sbjct: 179 AIDAILNQKGTGVKCIYVAIGQKRSTVAQIYKKLED--AGAMEYTTIVAATASEAAPLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           MAP + V++ EYF  KG++VL++ D +++ A + RE++      P    YP  VF    R
Sbjct: 237 MAPYSGVSMGEYFLDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHSR 296

Query: 293 LLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER    S+K   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 297 LLERAAKLSDKLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A     K++ S +   + ++ E
Sbjct: 357 INAGISVSRVGGSAQIKAMKQVASKVKLELAQYTE 391


>gi|148999014|ref|ZP_01826447.1| V-type ATP synthase subunit B [Streptococcus pneumoniae SP11-BS70]
 gi|168484584|ref|ZP_02709536.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae CDC1873-00]
 gi|168491232|ref|ZP_02715375.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae CDC0288-04]
 gi|168575774|ref|ZP_02721689.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae MLV-016]
 gi|169834247|ref|YP_001694763.1| V-type ATP synthase subunit B [Streptococcus pneumoniae
           Hungary19A-6]
 gi|307067966|ref|YP_003876932.1| archaeal/vacuolar-type H+-ATPase subunit B [Streptococcus
           pneumoniae AP200]
 gi|238688423|sp|B1ICC8|VATB_STRPI RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|147755137|gb|EDK62191.1| V-type ATP synthase subunit B [Streptococcus pneumoniae SP11-BS70]
 gi|168996749|gb|ACA37361.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae Hungary19A-6]
 gi|172042190|gb|EDT50236.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae CDC1873-00]
 gi|183574364|gb|EDT94892.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae CDC0288-04]
 gi|183578360|gb|EDT98888.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae MLV-016]
 gi|306409503|gb|ADM84930.1| Archaeal/vacuolar-type H+-ATPase subunit B [Streptococcus
           pneumoniae AP200]
 gi|332201779|gb|EGJ15849.1| V-type sodium ATPase subunit B [Streptococcus pneumoniae GA47368]
          Length = 461

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 161/320 (50%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I+ D  +V +     G  +    + F      ++ S    GR+ N +GKPIDG  
Sbjct: 44  GQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  ++I  +    ++R   ++  +TGI  ID    L  GQ++ VF+GSG+  + L
Sbjct: 104 DLIP-EKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNEL 162

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSD 225
            +  AR      SD    V+ + +G     +     ++  + L+K      SV+ +  ++
Sbjct: 163 AAQIARQATVLNSDENFAVVFAAMG-----ITFEEAEFFMEELRKTGAIDRSVLFMNLAN 217

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  RGYP 
Sbjct: 218 DPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPG 277

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+  L  
Sbjct: 278 YLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHELYN 337

Query: 345 EGRYPPVDPLASVSRLADKA 364
           +G  PP++ L S+SRL DK 
Sbjct: 338 QGYRPPINVLPSLSRLKDKG 357


>gi|63253131|dbj|BAD98322.1| beta subunit of ATP synthesis [Arthropteris backleri]
          Length = 464

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 105 LGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 222 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 340 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|312984730|gb|ADR30615.1| ATP synthase beta chain [Lellingeria sp. MAS-2010]
 gi|312984786|gb|ADR30643.1| ATP synthase beta chain [Lellingeria pendula]
 gi|312984806|gb|ADR30653.1| ATP synthase beta chain [Lellingeria subsessilis]
 gi|312984808|gb|ADR30654.1| ATP synthase beta chain [Lellingeria subsessilis]
          Length = 419

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|240047471|ref|YP_002960859.1| F0F1 ATP synthase subunit beta [Mycoplasma conjunctivae HRC/581]
 gi|239985043|emb|CAT05036.1| ATP synthase beta chain [Mycoplasma conjunctivae]
          Length = 463

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 196/386 (50%), Gaps = 32/386 (8%)

Query: 27  SSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI---RINLDIVYICPVGIGEEISL 83
           +++  VY+     S+        +H+GK +  + +++   R+   ++Y       + I++
Sbjct: 10  TNVVEVYFESHFASKIQLEQRLTMHEGKTTLVIKKILDNNRVRAIVIYK-----NQAIAI 64

Query: 84  GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V +   F   P   +   +V N LG+ I+ ++ + K   +++I S +  +  +  +E
Sbjct: 65  GDPVVNTLNFLQVPVGGFAKNQVYNILGQSINDNELVAK---TVDINSTINISKQKFDLE 121

Query: 143 -KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKVIISLV--GE 197
            K  +TGI+ +D F P+  G +IG+F G+G+GK+ L+   +F  S   +KV    V  GE
Sbjct: 122 HKILETGIKALDFFVPIFEGYKIGIFGGAGVGKTVLMKEIIFNVSKQKEKVSSIFVGSGE 181

Query: 198 RGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  E  ++ +  D + KS + VA  +E+P  R M     +T AEY    + ++VLL 
Sbjct: 182 RSREGLELYQELVESDLMSKSTMFVAQMNETPGARSMIVPVGITCAEYARDVQKEDVLLF 241

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E+++   +     GY  ++ S++  + +R+   + E G+IT+  +V +
Sbjct: 242 IDNIYRFIQATNEVSSALEKNISIGGYHATLDSDVSFIQDRL--FKNENGSITSFQTVFL 299

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR------LADKAWSADE 369
             D+ +DP A S+ S LD   VL+R       +P  DPL S S       + +K ++A  
Sbjct: 300 PMDDLSDPAAISLFSHLDSSFVLSRDKMSRNIFPAFDPLLSSSNSVSANIIGEKHFNA-- 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGY 395
              +     ++ ++++  D+ LI G+
Sbjct: 358 ---IIGAKSIMKKYKDLEDVILILGF 380


>gi|328681687|gb|AEB32916.1| ATP synthase beta subunit [Paracromastigum drucei]
          Length = 380

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDTSTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|290745825|gb|ADD51582.1| ATP synthase beta chain [Ceradenia intonsa]
          Length = 393

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 45  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 102

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 103 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 162

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            NL +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 163 QNLSESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 222

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 223 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 280

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 281 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 339

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 340 QDIIAILG 347


>gi|52082873|gb|AAU26017.1| ATPase beta subunit [Manekia naranjoana]
          Length = 466

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 85  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 202 INEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +  V  D+  DP  
Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAAYVPADDLTDPAP 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFE 384
            +  + LD   VL+R LA +G YP V PL S S +       +E    +    L   R++
Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVYPLDSTSTMLQPRIVGEEHYETAQRVKLTSQRYK 379

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 380 ELQDIIAILG 389


>gi|42558372|gb|AAS19895.1| ATP synthase beta chain [Melpomene moniliformis]
 gi|42558374|gb|AAS19896.1| ATP synthase beta chain [Melpomene moniliformis]
 gi|42558378|gb|AAS19898.1| ATP synthase beta chain [Melpomene pseudonutans]
          Length = 422

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 74  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 128

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 129 YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 188

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 189 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 248

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 249 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 306

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 307 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 365

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 366 KELQDIIAILG 376


>gi|6017785|gb|AAF01627.1| ATP synthase beta subunit [Corydalis nobilis]
          Length = 489

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 95  GSTLGRIFNVLGEPVD---NLGPVDTRXXXPIHRSAPAFIELDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGQEHYETAQRVKQTSQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|149384585|gb|ABR25115.1| ATP synthase beta chain [Lomagramma guianensis]
          Length = 426

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 152/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+ +DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLSDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|42558366|gb|AAS19892.1| ATP synthase beta chain [Leucotrichum schenckii]
          Length = 422

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG     ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRIFNVLGEPVD---NLGPVRSTAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|16943751|emb|CAD10766.1| atp synthase, beta subunit [Paris tetraphylla]
          Length = 498

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +   ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSXVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|14718206|gb|AAK72841.1| ATP synthase beta subunit [Rhynchospora nervosa]
          Length = 482

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+ GI+V+D+  P
Sbjct: 97  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFEXGIKVVDLLAP 153

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L+    +  AR+     V   +  ER RE      E  E  
Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIARAHGGVSVFGGVG-ERTREGDDLYMEMKESG 212

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 213 VINEXNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGAITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP V PL S S +       +E  +    +     R+
Sbjct: 331 PATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTMLQPNIVGNEHYETAQRVKQTSQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|312984802|gb|ADR30651.1| ATP synthase beta chain [Lellingeria simacensis]
          Length = 402

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 31  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 86  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 145

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 146 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 206 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 264 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|224830560|gb|ACN66375.1| ATP synthase beta chain [Parapachygone longifolia]
          Length = 489

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 153/313 (48%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  +    P  +        F+TGI V D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDNRTTSPMXXSEPAFIQLDTXLSIFETGIXVXDLLX 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S  G  G   RE  + Y+   +K+
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSXFGGVGERTREGNDLYM--EMKE 212

Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S              +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 213 SGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 273 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 330

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381
           P   +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +   + 
Sbjct: 331 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQ 390

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 391 RYKELQDIIAILG 403


>gi|15901170|ref|NP_345774.1| V-type ATP synthase subunit B [Streptococcus pneumoniae TIGR4]
 gi|111658094|ref|ZP_01408794.1| hypothetical protein SpneT_02000745 [Streptococcus pneumoniae
           TIGR4]
 gi|148994742|ref|ZP_01823826.1| V-type ATP synthase subunit B [Streptococcus pneumoniae SP9-BS68]
 gi|194398442|ref|YP_002037917.1| V-type ATP synthase subunit B [Streptococcus pneumoniae G54]
 gi|221231991|ref|YP_002511143.1| V-type sodium ATP synthase subunit B [Streptococcus pneumoniae ATCC
           700669]
 gi|225854780|ref|YP_002736292.1| V-type ATP synthase subunit B [Streptococcus pneumoniae JJA]
 gi|289167652|ref|YP_003445921.1| V-type H+-ATPase, subunit B [Streptococcus mitis B6]
 gi|307127094|ref|YP_003879125.1| V-type ATP synthase subunit beta [Streptococcus pneumoniae 670-6B]
 gi|81620400|sp|Q97QA9|VATB_STRPN RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|238690827|sp|B5E551|VATB_STRP4 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|254764990|sp|B8ZK30|VATB_STRPJ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|254764991|sp|C1CES1|VATB_STRZJ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|14972797|gb|AAK75414.1| v-type sodium ATP synthase, subunit B [Streptococcus pneumoniae
           TIGR4]
 gi|147927073|gb|EDK78114.1| V-type ATP synthase subunit B [Streptococcus pneumoniae SP9-BS68]
 gi|194358109|gb|ACF56557.1| v-type sodium ATP synthase, subunit B [Streptococcus pneumoniae
           G54]
 gi|220674451|emb|CAR69011.1| V-type sodium ATP synthase subunit B [Streptococcus pneumoniae ATCC
           700669]
 gi|225723179|gb|ACO19032.1| V-type ATP synthase beta chain (V-type ATPase subunitB)
           [Streptococcus pneumoniae JJA]
 gi|288907219|emb|CBJ22054.1| V-type H+-ATPase, subunit B [Streptococcus mitis B6]
 gi|306484156|gb|ADM91025.1| V-type ATP synthase beta chain [Streptococcus pneumoniae 670-6B]
 gi|332074648|gb|EGI85122.1| V-type sodium ATPase subunit B [Streptococcus pneumoniae GA17545]
 gi|332200759|gb|EGJ14831.1| V-type sodium ATPase subunit B [Streptococcus pneumoniae GA41317]
          Length = 461

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 161/320 (50%), Gaps = 21/320 (6%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I+ D  +V +     G  +    + F      ++ S    GR+ N +GKPIDG  
Sbjct: 44  GQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  ++I  +    ++R   ++  +TGI  ID    L  GQ++ VF+GSG+  + L
Sbjct: 104 DLIP-EKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNEL 162

Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSD 225
            +  AR      SD    V+ + +G     +     ++  + L+K      SV+ +  ++
Sbjct: 163 AAQIARQATVLNSDENFAVVFAAMG-----ITFEEAEFFMEELRKTGAIDRSVLFMNLAN 217

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           +  I R   P  A+T AEY + + D +VL+I+  +T +  ++RE++    E+P  RGYP 
Sbjct: 218 DPAIERIATPRIALTAAEYLAFEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPG 277

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            +++ L  L ER G    +KG++T +  + +  D+   PI D    I +G I+L+  L  
Sbjct: 278 YLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHELYN 337

Query: 345 EGRYPPVDPLASVSRLADKA 364
           +G  PP++ L S+SRL DK 
Sbjct: 338 QGYRPPINVLPSLSRLKDKG 357


>gi|290745863|gb|ADD51601.1| ATP synthase beta chain [Lellingeria simacensis]
          Length = 404

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 73  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 127

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 128 YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 187

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 188 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 247

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 248 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 305

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 306 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 364

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 365 KELQDIIAILG 375


>gi|290745861|gb|ADD51600.1| ATP synthase beta chain [Lellingeria major]
          Length = 392

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 42  TTLGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 99

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+        
Sbjct: 100 RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVI 159

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 160 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 219

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 220 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 277

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 278 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 336

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 337 ELQDIIAILG 346


>gi|156739820|gb|ABU93563.1| ATP synthase beta subunit [Gymnopteris decurrens]
          Length = 389

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|219681951|ref|YP_002468335.1| ATP synthase subunit A [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254807684|sp|B8D6S5|ATPA_BUCAT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219621684|gb|ACL29840.1| ATP synthase subunit A [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086333|gb|ADP66414.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 512

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 151/301 (50%), Gaps = 17/301 (5%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRV+NALG PIDG DS+ + D    + +  P  ++R+ V +  +TG +VID   P+  
Sbjct: 103 FLGRVVNALGFPIDGKDSI-QNDGFFPVEADAPGVIDRKSVNQPIQTGYKVIDSMIPIGR 161

Query: 161 GQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           GQR  +      GK+ L   ++  +     K I   +G++   +   ++    +N L  +
Sbjct: 162 GQRELIIGDRQTGKTALAIDTIINQKQSGIKCIYVAIGQKLSTIINVVKKLEENNALFNT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++VVA++ E+  L+ +AP +   +AE+F +KG++ L+I D +++ A + R+I+      P
Sbjct: 222 IIVVASASEAASLQYLAPYSGCAMAEFFRNKGEDSLIIYDDLSKHAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE-------------KGNITAVISVLVDGDNHNDPI 324
               +P  +F    RLLER      E              G+ITA+  +     + +  +
Sbjct: 282 GREAFPGDIFYLHSRLLERASRVSMEYVQKITKNKITGKTGSITALPIIETQSGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL S +   + +++
Sbjct: 342 PTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGSAAQTTIIKKLSSGIRTALAQYQ 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|194267389|gb|ACF35680.1| ATP synthase beta subunit [Platanus occidentalis]
          Length = 498

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|15616636|ref|NP_239848.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681395|ref|YP_002467780.1| ATP synthase subunit A [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471068|ref|ZP_05635067.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11131212|sp|P57122|ATPA_BUCAI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807683|sp|B8D8H1|ATPA_BUCA5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|25290461|pir||F84930 H+-transporting two-sector ATPase (EC 3.6.3.14) alpha chain
           [imported] - Buchnera sp. (strain APS)
 gi|10038699|dbj|BAB12734.1| ATP synthase alpha chain [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624238|gb|ACL30393.1| ATP synthase subunit A [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086908|gb|ADP66988.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087499|gb|ADP67578.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 512

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 151/301 (50%), Gaps = 17/301 (5%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRV+NALG PIDG DS+ + D    + +  P  ++R+ V +  +TG +VID   P+  
Sbjct: 103 FLGRVVNALGFPIDGKDSI-QNDGFFPVEADAPGVIDRKSVNQPIQTGYKVIDSMIPIGR 161

Query: 161 GQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           GQR  +      GK+ L   ++  +     K I   +G++   +   ++    +N L  +
Sbjct: 162 GQRELIIGDRQTGKTALAIDTIINQKQSGIKCIYVAIGQKLSTIINVVKKLEENNALFNT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++VVA++ E+  L+ +AP +   +AE+F +KG++ L+I D +++ A + R+I+      P
Sbjct: 222 IIVVASASEAASLQYLAPYSGCAMAEFFRNKGEDSLIIYDDLSKHAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE-------------KGNITAVISVLVDGDNHNDPI 324
               +P  +F    RLLER      E              G+ITA+  +     + +  +
Sbjct: 282 GREAFPGDIFYLHSRLLERASRVSMEYVQKITKNKITGKTGSITALPIIETQSGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL S +   + +++
Sbjct: 342 PTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGSAAQTTIIKKLSSGIRTALAQYQ 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|322718706|gb|ADX07365.1| ATP synthase beta chain [Leucotrichum schenckii]
 gi|322718708|gb|ADX07366.1| ATP synthase beta chain [Leucotrichum organense]
 gi|322718710|gb|ADX07367.1| ATP synthase beta chain [Leucotrichum organense]
 gi|322718712|gb|ADX07368.1| ATP synthase beta chain [Leucotrichum organense]
          Length = 419

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 159/311 (51%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG     ++  + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 29  TTLGRIFNVLGEPVD---NLGPVRSTAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 86  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 145

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 146 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 206 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 264 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|312984834|gb|ADR30667.1| ATP synthase beta chain [Melpomene aff. moniliformis Sundue 1366]
 gi|312984836|gb|ADR30668.1| ATP synthase beta chain [Melpomene aff. xiphopteroides Labiak 4301]
 gi|312984840|gb|ADR30670.1| ATP synthase beta chain [Melpomene erecta]
 gi|312984846|gb|ADR30673.1| ATP synthase beta chain [Melpomene flabelliformis]
 gi|312984848|gb|ADR30674.1| ATP synthase beta chain [Melpomene melanosticta]
 gi|312984850|gb|ADR30675.1| ATP synthase beta chain [Melpomene sp. ML-2008e]
 gi|312984852|gb|ADR30676.1| ATP synthase beta chain [Melpomene sp. ML-2008e]
 gi|312984856|gb|ADR30678.1| ATP synthase beta chain [Melpomene xiphopteroides]
 gi|312984858|gb|ADR30679.1| ATP synthase beta chain [Melpomene xiphopteroides]
          Length = 419

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIF 155
              GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+ 
Sbjct: 29  TTLGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLL 83

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            P   G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+     
Sbjct: 84  APYRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 143

Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                 N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF 
Sbjct: 144 KVINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFV 203

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 204 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 261

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 262 APATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 320

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 321 RYKELQDIIAILG 333


>gi|42558376|gb|AAS19897.1| ATP synthase beta chain [Melpomene flabelliformis]
          Length = 422

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 74  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 128

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 129 YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 188

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 189 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 248

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 249 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 306

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 307 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 365

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 366 KELQDIIAILG 376


>gi|166836592|gb|ABY90528.1| ATP synthase beta chain [Pilularia americana]
 gi|166836594|gb|ABY90529.1| ATP synthase beta chain [Pilularia americana]
          Length = 386

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 156/306 (50%), Gaps = 22/306 (7%)

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 58  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINEQN 117

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 177

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 178 ALLGRTPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 235

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEPQD 294

Query: 389 IRLIGG 394
           I  I G
Sbjct: 295 IIAILG 300


>gi|42558322|gb|AAS19870.1| ATP synthase beta chain [Ctenopteris heterophylla]
          Length = 422

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|312984764|gb|ADR30632.1| ATP synthase beta chain [Lellingeria limula]
          Length = 419

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLCIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|149384829|gb|ABR25223.1| ATP synthase beta chain [Athyrium niponicum]
          Length = 421

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|42558324|gb|AAS19871.1| ATP synthase beta chain [Ctenopteris heterophylla]
          Length = 422

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|149384445|gb|ABR25045.1| ATP synthase beta chain [Sadleria cyatheoides]
          Length = 426

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|160946955|ref|ZP_02094158.1| hypothetical protein PEPMIC_00916 [Parvimonas micra ATCC 33270]
 gi|158447339|gb|EDP24334.1| hypothetical protein PEPMIC_00916 [Parvimonas micra ATCC 33270]
          Length = 458

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 145/276 (52%), Gaps = 11/276 (3%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+ + LG PID    +   ++ ++I       ++R    +  +TGI  ID    
Sbjct: 82  SEDMIGRIFDGLGNPIDKGPKIIP-EMKIDINGSPINPVSRDYPSEFIQTGISTIDGLNT 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYL 210
           L  GQ++ +F+GSG+  + + +  AR        + F  V+   +G    E + FI+D+ 
Sbjct: 141 LVRGQKLPIFSGSGLPHNNVAAQIARQAKVLGSGEKF-AVVFGAMGITFEEAQFFIDDFT 199

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268
               + ++V+ +  +++  I R   P  A+T AEY +  KG +VL+IL  +T +A ++RE
Sbjct: 200 KTGAIDRAVLFMNLANDPAIERIATPRMALTCAEYLAFEKGMHVLVILTDLTNYAEALRE 259

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++    E+P  RGYP  ++++L  + ER G  +   G+IT +  + +  D+   PI D  
Sbjct: 260 VSAARKEVPGRRGYPGYLYTDLSTIYERAGRLKGRPGSITQIPILTMPEDDITHPIPDLT 319

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             I +G I+L+R L ++G  PP+  + S+SRL DK 
Sbjct: 320 GYITEGQIILSRELYKQGIQPPIFVIPSLSRLKDKG 355


>gi|42558368|gb|AAS19893.1| ATP synthase beta chain [Lellingeria pseudomitchellae]
          Length = 422

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 157/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG     ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRIFNVLGEPVD---NLGPVRSTAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 131 RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 189

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 190 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 249

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 250 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 307

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 308 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVNQTLQRYK 366

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 367 ELQDIIAILG 376


>gi|328681607|gb|AEB32876.1| ATP synthase beta subunit [Chloranthelia berggrenii]
          Length = 380

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|313681885|ref|YP_004059623.1| ATP synthase f1 subcomplex alpha subunit [Sulfuricurvum kujiense
           DSM 16994]
 gi|313154745|gb|ADR33423.1| ATP synthase F1 subcomplex alpha subunit [Sulfuricurvum kujiense
           DSM 16994]
          Length = 505

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 177/376 (47%), Gaps = 13/376 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G V+ +    V +  +G G+E+  G  V   GR  R+       GRV+NALG+PIDG   
Sbjct: 63  GLVMNLEESSVGVVILGKGKELREGMSVKRLGRLLRVPVGNALLGRVVNALGEPIDGKGP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-- 176
           +   ++   +  K P  M R+ V +   TGI+ ID   P+  GQR  +      GK+T  
Sbjct: 123 IETTEVRF-VEEKAPGIMARKSVHEPMATGIKAIDALVPIGRGQRELIIGDRQTGKTTVA 181

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
           L ++  +       I   VG++   V + I   L +N  +  +++V AT+ E+  L+ +A
Sbjct: 182 LDTIINQKGNGVVCIYVAVGQKESTVAQVIR-RLEENGAMDYTIIVSATASEAAALQFLA 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    RLL
Sbjct: 241 PYTGVTMGEYFRDNAKHGLIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     +    I  +V SI DG I L   L   G  P ++
Sbjct: 301 ERAAKLNDEMGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPAIN 360

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  +L   + ++   R+++    +   +D +  K + +   
Sbjct: 361 VGLSVSRVGGAAQIKATKQVAGTLRLDLAQY---RELQAFAQFASDLDEVSRKQLERGQR 417

Query: 413 IYDFLKQSP-SDLSSE 427
           + + LKQ P S L +E
Sbjct: 418 MVEVLKQPPYSPLGAE 433


>gi|149384525|gb|ABR25085.1| ATP synthase beta chain [Elaphoglossum amygdalifolium]
          Length = 401

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 14  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 70

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 71  RGGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESRVI 129

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 130 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 189

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 190 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 247

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 248 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 306

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 307 ELQDIIAILG 316


>gi|21667292|gb|AAM74013.1| ATP synthase beta chain [Adenophorus abietinus]
          Length = 422

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP + + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPASATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|312984828|gb|ADR30664.1| ATP synthase beta chain [Lellingeria wittigiana]
 gi|312984830|gb|ADR30665.1| ATP synthase beta chain [Lellingeria wittigiana]
 gi|312984832|gb|ADR30666.1| ATP synthase beta chain [Lellingeria wittigiana]
          Length = 419

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 89  GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 147

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|312984798|gb|ADR30649.1| ATP synthase beta chain [Lellingeria pumila]
          Length = 419

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLCIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|290745885|gb|ADD51611.1| ATP synthase beta chain [Terpsichore anfractuosa]
          Length = 421

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|122051545|gb|ABM65875.1| ATP synthase beta chain [Lellingeria saffordii]
          Length = 410

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 158/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG   + ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 62  LGRIFNVLGEPVD---NLGPVRNSAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 118

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 119 RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 177

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 178 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 237

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 238 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 295

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 296 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 354

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 355 ELQDIIAILG 364


>gi|63253143|dbj|BAD98331.1| beta subunit of ATP synthesis [Araiostegia hymenophylloides]
          Length = 464

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 151/307 (49%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 106 GRISNVLGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +    
Sbjct: 165 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 223

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 401 DIIAILG 407


>gi|42558402|gb|AAS19910.1| ATP synthase beta chain [Terpsichore anfractuosa]
          Length = 422

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|290745887|gb|ADD51612.1| ATP synthase beta chain [Terpsichore anfractuosa]
          Length = 391

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 74  GRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRRG 131

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           
Sbjct: 132 GKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 191

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 192 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 251

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 252 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 309

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 310 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 368

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 369 DIIAILG 375


>gi|7708282|emb|CAB90067.1| ATP synthase beta subunit [Dudleya viscida]
          Length = 483

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 151/305 (49%), Gaps = 16/305 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N  G+P+D    +  G  +  I    P  +        F+TG +V+D+  P   G 
Sbjct: 93  GRIFNVXGEPVDNLGPVDXGT-TXPIHRSAPAFIQXDTKLSIFETGXKVVDLLXPXRRGG 151

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +        S+ G  G   RE  + Y+           N
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKAHGGXSVFGGVGXRTREGNDLYMEMKESGVINEKN 211

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 212 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVXEQDVLLFIDNIFRFVQAGSEVS 271

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 272 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 329

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 330 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 389

Query: 390 RLIGG 394
             I G
Sbjct: 390 IAILG 394


>gi|319954479|ref|YP_004165746.1| ATP synthase f1 subcomplex alpha subunit [Cellulophaga algicola DSM
           14237]
 gi|319423139|gb|ADV50248.1| ATP synthase F1 subcomplex alpha subunit [Cellulophaga algicola DSM
           14237]
          Length = 509

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 164/348 (47%), Gaps = 19/348 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G    I  D +    +G   +++ GDLV    R    P      GRVI  LG+P+D    
Sbjct: 66  GIAFSIEEDEIGTILLGEDSDLNAGDLVERTNRVMDVPVGKALLGRVIGPLGQPMDE--- 122

Query: 119 LGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KG +S E    I     P M+R  V    +TGI+VID   P+  GQR  +      GK
Sbjct: 123 --KGAISYEKRLPIERSATPIMDRSGVSIPLQTGIKVIDALIPIGRGQRELILGDRQTGK 180

Query: 175 STLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPI 229
            T +++    +  DK +I +   +G+R   V + + D L +N  ++ ++V+V   ++SP 
Sbjct: 181 -TAIALDTIVNQKDKDVICVYCAIGQRASAVAKVVAD-LKENGAMEYTIVMVTEGNDSPG 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP  A +IAEYF  KG +VL++ D +T  A + RE++      P    +P  +F  
Sbjct: 239 LQYIAPYAATSIAEYFMQKGKDVLIVYDDLTNHARAYRELSLLLKRPPGREAFPGDIFYI 298

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      E   G++TA+  +  +  N +  I  ++ SI DG I L+    E G 
Sbjct: 299 HSRLLERSTHLSDELGGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPKQFELGI 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
            P V+   SVSR+  KA     + +   L     +FEE       G +
Sbjct: 359 LPAVEVGKSVSRVGGKAQLPAYRAIAGDLKLGFSQFEELETFARFGSH 406


>gi|257095878|ref|YP_003169519.1| ATP synthase F1 subunit alpha [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048402|gb|ACV37590.1| ATP synthase F1, alpha subunit [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 512

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 205/446 (45%), Gaps = 40/446 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL +       G + S+T     V  L+  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSKIENLAISADLRTQGTVVSVTDGICRVYGLTD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + ++ D V    +G  ++IS GD V   GR    P      GRV+N+LG+PID
Sbjct: 58  -NTFGMALNLDRDSVGAVVLGEYDQISEGDTVKTTGRILEVPIGPELLGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           G     KG L+ ++  K+    P  + R+ V +  +TG++ ID   P+  GQR  +    
Sbjct: 117 G-----KGPLNHKLTDKIEKVAPGVIWRKSVSQPVQTGLKSIDAMVPIGRGQRELIIGDR 171

Query: 171 GIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDE 226
             GK+ +   ++  +       I   VG++   V   +   L +N  ++ ++VV AT+ E
Sbjct: 172 QTGKTAVAVDTIINQKGQNLICIYVAVGQKASTVANVVRK-LEENGAMEYTIVVAATASE 230

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S  L+ +AP +  T+ EYF  +G + L+I D +T+ A + R+++      P    YP  V
Sbjct: 231 SAALQYIAPYSGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDV 290

Query: 287 FSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           F    RLLER              G  + + G++TA+  +     + +  +  +V SI D
Sbjct: 291 FYLHSRLLERAARVSEEWVEKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITD 350

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G I L+  L   G  P +D   SVSR+   A +   KKL   +   + ++   R++    
Sbjct: 351 GQIFLDTDLFNAGVRPAIDAGISVSRVGGAAQTKVIKKLGGGVRLALAQY---RELAAFA 407

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   +D    K + +  ++ + +KQ
Sbjct: 408 QFASDLDEATRKQLDRGRLVTELMKQ 433


>gi|158602245|gb|ABW74589.1| ATP synthase beta subunit [Adonis amurensis]
          Length = 480

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 150/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+              I    P  +        F+TGI+V+D+  P 
Sbjct: 86  GATLGRIFNVLGEPVXXXXXXXX-XXXXPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 204

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 205 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 265 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 323 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 382

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 383 LQDIIAILG 391


>gi|56112417|gb|AAV71163.1| ATP synthase subunit B [Phyllanthus emblica]
 gi|56112429|gb|AAV71169.1| ATP synthase subunit B [Breynia fruticosa]
 gi|56112431|gb|AAV71170.1| ATP synthase subunit B [Phyllanthus urinaria]
          Length = 324

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 170

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 171 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 230

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 231 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 288

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 289 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 324


>gi|156739680|gb|ABU93493.1| ATP synthase beta subunit [Polystichum acutidens]
          Length = 394

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|21667282|gb|AAM74008.1| ATP synthase beta chain [Grammitis tenella]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|149384573|gb|ABR25109.1| ATP synthase beta chain [Elaphoglossum tripartitum]
          Length = 415

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVRNSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 85  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 143

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 144 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 203

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 204 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 261

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 262 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 320

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 321 ELQDIIAILG 330


>gi|159227286|emb|CAJ80434.1| ATP synthase beta subunit [Solanum marginatum]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|118576628|ref|YP_876371.1| archaeal/vacuolar-type H -ATPase subunit B [Cenarchaeum symbiosum
           A]
 gi|171473013|sp|A0RXK0|VATB_CENSY RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|118195149|gb|ABK78067.1| archaeal/vacuolar-type H -ATPase subunit B [Cenarchaeum symbiosum
           A]
          Length = 462

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 145/270 (53%), Gaps = 15/270 (5%)

Query: 102 CGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
            GR+ + LG+P D   D +   D  ++I  +      R+  +   +TG+  ID    L  
Sbjct: 90  LGRIFDGLGRPKDKLPDPIA--DKFIDINGEAMNPEQREYPKDFIQTGVSAIDGIMTLVR 147

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+GSG+  + L +  AR        D F  V+ + +G +  E  E+    L ++
Sbjct: 148 GQKLPIFSGSGMSHNILAAQIARQASVVGTGDDF-AVVFAAIGVQYSEA-EYFRRSLEES 205

Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             LK+SV+ +  +++  I R + P  A+T+AEY +   G +VL+IL  +T +A ++REI+
Sbjct: 206 GALKRSVLFLNLANDPAIERIITPRVALTVAEYLAFDLGMHVLVILTDMTNYAEALREIS 265

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  +GYP  ++++L  + ER G     KG++T V  + +  D+   PI D    
Sbjct: 266 AAREEVPGRKGYPGYLYTDLSTIYERAGRLVGRKGSVTQVPILTMPSDDITHPIPDLTGY 325

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           I +G +VL R L  +G YPPV+ L S+SRL
Sbjct: 326 ITEGQVVLGRDLFRQGVYPPVNILMSLSRL 355


>gi|14718054|gb|AAK72768.1| ATP synthase beta subunit [Flacourtia jangomas]
          Length = 376

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 19/285 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---DLGPVDTQTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEE 374


>gi|160934449|ref|ZP_02081836.1| hypothetical protein CLOLEP_03322 [Clostridium leptum DSM 753]
 gi|156867122|gb|EDO60494.1| hypothetical protein CLOLEP_03322 [Clostridium leptum DSM 753]
          Length = 490

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 164/336 (48%), Gaps = 26/336 (7%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVIN 107
           +H    +   G++++I    V I        ISLG+   H  GR   +  S    GR  +
Sbjct: 32  IHLDNGTRRQGRIVQIEGRRVVIQVFEGTHSISLGNTRTHLIGRPMELPLSEEILGRTFD 91

Query: 108 ALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
             G PIDG   LG+   +  M+I       ++R   +    TGI  ID+   L  GQ++ 
Sbjct: 92  GAGHPIDG---LGEIFPEKRMDINGTAINPVSRVYPKNYICTGISSIDVLCTLIRGQKLP 148

Query: 166 VFAGSGIGKSTLLSMFARSDCFDK-------VIISLVGERGREVREFIEDYLGDN----- 213
           +F+GSG+  + L +   R             ++ + +G     V++ + DY   +     
Sbjct: 149 IFSGSGMRHNDLAAQIVRQAKIANDESAQFCIVFAAMG-----VQKDVADYFRRSFDESG 203

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271
            L+K V+ V  +++  I R + P  A+T AEY +  K  +VL+++  +T +A ++RE ++
Sbjct: 204 VLQKVVMFVNLANDPVIERTLTPRCALTAAEYLAFEKNMHVLVVMTDMTSYAEALREFSS 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE+P   GYP  ++S+L  + ER G  +  +G++T +  + +  D+   P+ D    I
Sbjct: 264 SKGEIPGRGGYPGYLYSDLASMYERAGMVKGREGSVTQIPILTMPNDDITQPVPDLTGYI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
            +G IVL+RSL   G YPPV  L S+SRL      A
Sbjct: 324 TEGQIVLDRSLEGGGIYPPVSVLPSLSRLMKDGIGA 359


>gi|7708540|emb|CAB89962.1| ATP synthase beta subunit [Picramnia pentandra]
          Length = 475

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLXTXLSIFETGIKVVDLLA 158

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT + +V V  D+  DP 
Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTREGSITXIQAVYVPADDLTDPA 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
                + LD   VL+R LA  G YP VD L S S  L  +    D  +    +   + R+
Sbjct: 337 PARTFAHLDATTVLSRGLAAXGMYPAVDXLDSTSXMLQPRIVGXDRYEXAQRVKQTLXRY 396

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 397 KELQDIIAILG 407


>gi|14718132|gb|AAK72805.1| ATP synthase beta subunit [Mirabilis jalapa]
          Length = 373

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365


>gi|312984734|gb|ADR30617.1| ATP synthase beta chain [Lellingeria brevistipes]
          Length = 419

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 158/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG   + ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVRNSAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 88  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 146

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 265 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|159227260|emb|CAJ80421.1| ATP synthase beta subunit [Solanum rothii]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|110348939|gb|ABG73041.1| ATP synthase beta chain [Marsilea angustifolia]
          Length = 384

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 156/304 (51%), Gaps = 22/304 (7%)

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRI 164
           N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P   G +I
Sbjct: 1   NVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 57

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ 
Sbjct: 58  GSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEENIS 117

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 118 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 177

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 178 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 235

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIR 390
           D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI 
Sbjct: 236 DATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDII 294

Query: 391 LIGG 394
            I G
Sbjct: 295 AILG 298


>gi|29726152|gb|AAD00602.2| ATP synthase beta subunit [Dendromecon rigidum]
          Length = 480

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S    S  P  +        F+TGI+V+D+  P 
Sbjct: 86  GATLGRIFNVLGEPVDNLGPVXXXTXSPXHRS-APAFIQLDTKLSIFETGIKVVDLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 204

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 205 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 265 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLXDPAPA 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 323 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 382

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 383 LQDIIAILG 391


>gi|62902875|gb|AAY19352.1| ATP synthase beta subunit [Rinorea pubiflora]
          Length = 479

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 86  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 142

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMXESG 202

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 203 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP 
Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXEGSITSIQAVXVPADDLTDPA 320

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
                +  D    L+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 321 PAXXFAHXDAXTXLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 380

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 381 KELQDIIAILG 391


>gi|42558414|gb|AAS19916.1| ATP synthase beta chain [Terpsichore longisetosa]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRTSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|14717926|gb|AAK72706.1| ATP synthase beta subunit [Akania bidwillii]
          Length = 379

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 144/276 (52%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 91  GATXGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 147

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK  L+     +       +S+ G  G   RE  + Y+      
Sbjct: 148 PYRRGGKIGLFGGAGVGKXVLIMELIXNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 208 VINXQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 325

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 361


>gi|229829782|ref|ZP_04455851.1| hypothetical protein GCWU000342_01879 [Shuttleworthia satelles DSM
           14600]
 gi|229791771|gb|EEP27885.1| hypothetical protein GCWU000342_01879 [Shuttleworthia satelles DSM
           14600]
          Length = 598

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 165/346 (47%), Gaps = 16/346 (4%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           R  I  S  + GRV++ALG PIDG  ++   D    I ++ P  ++RQ V    +TGI  
Sbjct: 187 RAGIPVSDAYLGRVVDALGNPIDGGVAIKASDYR-PIENEAPGIIDRQPVNVPLQTGILA 245

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLS----MFARSDCFDKVIISLVGERGREVREFIE 207
           ID   P+  GQR  +      GK+ + +         +C    I   +G++   +   + 
Sbjct: 246 IDSMFPIGRGQRELIIGDRQTGKTAIATDAILNQKGKNCI--CIYVAIGQKSSTIAGIVN 303

Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                D +  SVVV +T+ +   L+ +AP  A  +AEYF  KG +VL++ D +++ A + 
Sbjct: 304 TLQAHDAMDYSVVVASTASDPAPLQYIAPYAATALAEYFMHKGKDVLIVYDDLSKHAVAY 363

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPI 324
           R ++   G  P    YP  VF    RLLER     +E   G+ITA+  +     + +  I
Sbjct: 364 RALSLLLGRSPGREAYPGDVFYLHSRLLERCARLSEELGGGSITALPIIETQDGDVSAYI 423

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L + L  EG+ P V+   SVSR+   A +   KK   SL   + ++ 
Sbjct: 424 PTNVISITDGQIFLEQDLFFEGQRPAVNVGLSVSRVGGAAQTKAMKKATGSLRIDLAQY- 482

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDLSSE 427
             R++++   +   +D      + Q  ++ + LKQ   SP  +S +
Sbjct: 483 --REMQVFTQFSSDLDEATKNQLAQGAVLMELLKQPQGSPLSMSDQ 526


>gi|63253135|dbj|BAD98325.1| beta subunit of ATP synthesis [Oleandra wallichii]
          Length = 464

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 153/307 (49%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G
Sbjct: 105 LGRISNVLGEPVDNLGPVRSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 163

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           
Sbjct: 164 GKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 223

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 283

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 284 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 341

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 401 DIIAILG 407


>gi|49182426|gb|AAT57692.1| ATP synthase beta chain [Jubula hutchinsiae subsp. pennsylvanica]
          Length = 369

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S  + + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GRPVD---NLGPVDASTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|60117144|ref|YP_209607.1| ATP synthase F1 subunit alpha [Polysphondylium pallidum]
 gi|51339708|gb|AAU00622.1| ATP synthase F1 subunit alpha [Polysphondylium pallidum]
          Length = 533

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 206/456 (45%), Gaps = 45/456 (9%)

Query: 1   MQKNLETLAQ-LAEDYSK------NLVVQGGYISSITSVYYTVTCLSQY---VCLGDFVV 50
           M KN E   Q L ++++       NL +   Y+ S+   Y  V    ++   + + D VV
Sbjct: 1   MNKNQELYIQNLVQNFTNERKKFLNLKIFVNYLKSLNQKYNFVKNAGKFGKVLFIKDGVV 60

Query: 51  H-QGKNSDNLGQVIR----------INLDIVYICPVGIGEEISLGDLVFHWG-------- 91
              G N   +G+ +           +NL+   +  V  GE     D + H G        
Sbjct: 61  KVSGLNKIKIGEKVEFLGKNLFGMALNLEANSVGIVIFGE-----DKLIHEGVIVKRCDQ 115

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            F I       GRV++ LG+PIDG + +   K    + +  K P  + R+ V +   TG+
Sbjct: 116 NFAIKIDRTMLGRVVDVLGQPIDGKNEIKETKNARLISLERKAPGIVTRKSVHESMLTGV 175

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206
           +++D   P+  GQR  +      GKS +      +   +K II +   VG++   +R  +
Sbjct: 176 KIVDALLPIGRGQRELIIGDRQTGKSAIAIDAILNQKTNKDIICVYVSVGQKKSTIRRLV 235

Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E   +   L  S+VVV+T+ ++  L+ +AP +   I E+F  KG++ L+I D +++ A +
Sbjct: 236 EMLNMKGALDYSIVVVSTASDASPLQFLAPYSGCAIGEFFRDKGEHALIIYDDLSKHAVA 295

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDP 323
            R+++      P    YP  VF    RLLER     ++   G++TA   +     + +  
Sbjct: 296 YRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKLNEKYGSGSLTAFPIIETQAGDVSAY 355

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           I  +V SI DG I L + L  +G  P V+   SVSR+   A SA  K+L  +L   + ++
Sbjct: 356 IPTNVISITDGQIFLEKDLFNKGIRPAVNVGLSVSRVGSAAQSAVMKRLAGALKLELAQY 415

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +    D +    + +  I+ + LKQ
Sbjct: 416 ---RELARFEQFSSNNDAVTTAILKKGKIVIEMLKQ 448


>gi|290745879|gb|ADD51608.1| ATP synthase beta chain [Melpomene vernicosa]
          Length = 411

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 73  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 127

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 128 YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 187

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 188 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 247

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 248 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 305

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 306 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 364

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 365 KELQDIIAILG 375


>gi|159227302|emb|CAJ80442.1| ATP synthase beta subunit [Solanum vespertilio]
 gi|159227346|emb|CAJ80464.1| ATP synthase beta subunit [Solanum laciniatum]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   ++R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLNRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|159227300|emb|CAJ80441.1| ATP synthase beta subunit [Solanum wrightii]
 gi|159227332|emb|CAJ80457.1| ATP synthase beta subunit [Solanum ferocissimum]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|327541724|gb|EGF28244.1| F0F1 ATP synthase subunit alpha [Rhodopirellula baltica WH47]
          Length = 508

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 164/331 (49%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           I  N+D   I  V +G+   +  GD V+  GR   ++      GRV++ LG+P+DG+  +
Sbjct: 65  IAFNVDEHEIGVVLLGDYSRLHAGDEVWRTGRVMDVAVGEGLLGRVVDPLGRPLDGNGVV 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              +  + I    PP M+R  V    +TGI+VID   P+  GQR  +      GK+ +  
Sbjct: 125 HCNE-RLPIERPAPPIMDRAPVTVPLQTGIKVIDALIPIGRGQRELILGDRRTGKTAIAL 183

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
            +M  +       +   +G+R   V + +      D ++ +VVVV+  ++ P L  +AP 
Sbjct: 184 DTMINQRGQNTVCVYCAIGQRASAVAKAVAVLKENDAMEYTVVVVSEGNDPPGLAYIAPY 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  KG +VL++ D +T+ A + RE++      P    +P  +F    RLLER
Sbjct: 244 AATSIAEYFMEKGRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLER 303

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++   G++TA+  +  +  + +  I  ++ SI DG I L+ SL E G  P VD  
Sbjct: 304 STHLREDLGGGSLTALPIIETEAQDISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVG 363

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+  KA  A  + +   L     +F+E
Sbjct: 364 KSVSRVGGKAQRATYRSVAGDLKLAYAQFQE 394


>gi|89242548|gb|ABD64632.1| ATPase beta subunit [Najas gracillima]
          Length = 436

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 167/359 (46%), Gaps = 29/359 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTLGQQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+ +D   +LG  D      I    P  +        F+TGI+V+D+  P   G 
Sbjct: 63  IFNVLGESVD---NLGPVDTRTRSPIHRSAPTFIELDTKLSIFETGIKVVDLLAPYRRGG 119

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 120 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 179

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 180 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 239

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP   +  +
Sbjct: 240 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAPATTFA 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +        E  +    +   + R++E +D
Sbjct: 298 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKEHYETAQRVKETLQRYKELQD 356


>gi|56112415|gb|AAV71162.1| ATP synthase subunit B [Phyllanthus amarus]
 gi|56112425|gb|AAV71167.1| ATP synthase subunit B [Phyllanthus guangdongensis]
 gi|56112427|gb|AAV71168.1| ATP synthase subunit B [Phyllanthus ruber]
          Length = 324

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 170

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 171 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 230

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 231 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 288

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 289 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 324


>gi|328681633|gb|AEB32889.1| ATP synthase beta subunit [Telaranea chaetocarpa]
          Length = 380

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|159227374|emb|CAJ80478.1| ATP synthase beta subunit [Physalis sp. P147]
 gi|159227394|emb|CAJ80488.1| ATP synthase beta subunit [Physalis sp. P136]
 gi|159227398|emb|CAJ80490.1| ATP synthase beta subunit [Physalis sp. P134]
 gi|159227400|emb|CAJ80491.1| ATP synthase beta subunit [Physalis sp. P133]
 gi|159227402|emb|CAJ80492.1| ATP synthase beta subunit [Physalis sp. P132]
 gi|159227404|emb|CAJ80493.1| ATP synthase beta subunit [Physalis sp. P131]
 gi|159227406|emb|CAJ80494.1| ATP synthase beta subunit [Physalis sp. P129]
 gi|159227408|emb|CAJ80495.1| ATP synthase beta subunit [Physalis sp. P128]
 gi|159227412|emb|CAJ80497.1| ATP synthase beta subunit [Physalis sp. P126]
 gi|159227418|emb|CAJ80500.1| ATP synthase beta subunit [Physalis philadelphica var. immaculata]
 gi|159227420|emb|CAJ80501.1| ATP synthase beta subunit [Physalis philadelphica var. immaculata]
 gi|159227430|emb|CAJ80506.1| ATP synthase beta subunit [Physalis sp. P113]
 gi|159227432|emb|CAJ80507.1| ATP synthase beta subunit [Physalis sp. P112]
 gi|159227434|emb|CAJ80508.1| ATP synthase beta subunit [Physalis philadelphica var. immaculata]
 gi|159227618|emb|CAJ80600.1| ATP synthase beta subunit [Witheringia coccoloboides]
 gi|159232204|emb|CAJ80617.1| ATP synthase beta subunit [Physalis nicandroides]
 gi|159232256|emb|CAJ80643.1| ATP synthase beta subunit [Nicotiana rustica]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|290745865|gb|ADD51602.1| ATP synthase beta chain [Lellingeria suprasculpta]
          Length = 393

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 45  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 102

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------- 210
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 103 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 162

Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
              +  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 163 QNXSESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 222

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 223 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 280

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 281 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 339

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 340 QDIIAILG 347


>gi|159227442|emb|CAJ80512.1| ATP synthase beta subunit [Physalis sp. P107]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 151/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|19033089|gb|AAL83529.1|AF408801_1 ATP synthase beta subunit [Klebsormidium flaccidum]
          Length = 402

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 158/313 (50%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG P+D   +LG  + +    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGGPVD---NLGPVNHTKTFPIHRPAPAFTQLDTKLAIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKES 152

Query: 218 VV-------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            V             V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 153 KVINEQDISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 212

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A G   ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 213 QAGSEVSALLGRMPSAVGSQPTLSTEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDP 270

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  ++   +   + 
Sbjct: 271 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKETLQ 329

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 330 RYKELQDIIAILG 342


>gi|26553512|ref|NP_757446.1| F0F1 ATP synthase subunit alpha [Mycoplasma penetrans HF-2]
 gi|81748104|sp|Q8EWZ0|ATPA_MYCPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|26453518|dbj|BAC43850.1| ATP synthase subunit alpha [Mycoplasma penetrans HF-2]
          Length = 513

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 179/382 (46%), Gaps = 11/382 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           Q+ E  +K L  + G + ++       + LS  V L + V+ +   + + G  + +    
Sbjct: 15  QIKEYQNKALYSEIGRVINVGDGIVQASGLSN-VMLNELVLFE---NGSYGMTLNLEATT 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             I  +G  E+I  G +V         P      GRVI+A+G PIDG+  + K D  M I
Sbjct: 71  CGIVMLGKFEDIKEGSIVKRTKNVVDVPVGDGLLGRVIDAMGNPIDGNGEI-KYDKKMPI 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDC 186
               P  M R  V +  +TG   ID   P+  GQR  +      GK+T+   ++  +   
Sbjct: 130 EKIAPGVMARASVCEPLETGTLAIDSMFPIGKGQRELIIGDKQTGKTTIAIDAIINQKGK 189

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
             K I   +G++   + +FI        L+ + +V +++ + P L  +AP T +TIAE +
Sbjct: 190 NVKCIYVFIGQKNSTIVQFINTLKQFGALEYTTIVASSASDLPSLNYLAPFTGITIAEEW 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK- 304
            SKG++VL+I D +++ A + R ++      P    YP  +F    RLLER G   KE  
Sbjct: 250 MSKGEDVLIIYDDLSKHAIAYRTLSLLLRRPPGREAYPGDIFYLHSRLLERSGKINKENG 309

Query: 305 -GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA+  +  +  + +  I  +V SI DG + +  +L   G+ P +D   SVSR+   
Sbjct: 310 GGSITALPIIETEAGDISAYIPTNVISITDGQLFMLTNLFNSGQRPAIDAGLSVSRVGSS 369

Query: 364 AWSADEKKLVSSLTHLIHRFEE 385
           A     KK   SL   + ++ E
Sbjct: 370 AQINAVKKTSGSLKLELAQYRE 391


>gi|312984762|gb|ADR30631.1| ATP synthase beta chain [Polypodium kaieteurum]
          Length = 419

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    +++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVQSIAISPIHRSAPAFTQLDTKLLIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|56112419|gb|AAV71164.1| ATP synthase subunit B [Phyllanthus cochinchinensis]
          Length = 324

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 170

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N  +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 171 VINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 230

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 231 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 288

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 289 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 324


>gi|42558328|gb|AAS19873.1| ATP synthase beta chain [Ctenopteris nutans]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|328681583|gb|AEB32864.1| ATP synthase beta subunit [Neogrollea notabilis]
          Length = 380

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|149384587|gb|ABR25116.1| ATP synthase beta chain [Maxonia apiifolia]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 152/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|149384753|gb|ABR25185.1| ATP synthase beta chain [Psammiosorus paucivenius]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|149384547|gb|ABR25096.1| ATP synthase beta chain [Elaphoglossum heterolepis]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 88  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 146

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 265 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|149384451|gb|ABR25048.1| ATP synthase beta chain [Woodwardia virginica]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWVVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|167588152|ref|ZP_02380540.1| type III secretion system ATPase [Burkholderia ubonensis Bu]
          Length = 174

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 2/163 (1%)

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI   +GE P  RG+P SVF+ELPRLLER G  E+  G+ITA+ +VL + D+ +DPIA+
Sbjct: 4   REIGLAAGEPPARRGFPPSVFAELPRLLERTGMGEQ--GSITALYTVLAEDDSGSDPIAE 61

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            VR ILDGHI+L+R +A   +YP +D L S+SR+  +  + +       L  L+ +  E 
Sbjct: 62  EVRGILDGHIILSREIAARNQYPAIDVLGSLSRIMPQVATREHVGAAGRLRQLLAKHREI 121

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +  +G Y+ G D   D+AV ++  I  FL Q   + S  D 
Sbjct: 122 ETLLQLGEYQAGSDPAADEAVAKIDRIRAFLNQRTDEHSPPDA 164


>gi|113910900|gb|ABI48182.1| ATPase beta subunit [Brachythecium rutabulum]
          Length = 462

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+ +D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 73  ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 129

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 130 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 189

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 190 INEENISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQA 249

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 250 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 307

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 308 ATTFAHLDATTVSSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 366

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 367 KELQDIIAILG 377


>gi|6686866|emb|CAB64753.1| ATP synthase beta subunit [Arctostaphylos uva-ursi]
 gi|6687203|emb|CAB64874.1| ATP synthase beta subunit [Couroupita guianensis]
          Length = 498

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +I +F G G GK+ L+    +  A++     V      ER RE  +   +    
Sbjct: 161 PYRRGGKIRLFGGXGXGKTVLIMEVINXIAKAHGXVSVFGGXG-ERTREGNDLYMEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R
Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|328681591|gb|AEB32868.1| ATP synthase beta subunit [Telaranea tasmanica]
          Length = 380

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|224830514|gb|ACN66352.1| ATP synthase beta chain [Cissampelos tropaeolifolia]
          Length = 489

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 171/367 (46%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 44  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 104 IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 160

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS----- 217
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S     
Sbjct: 161 KIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVINE 218

Query: 218 --------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268
                    +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E
Sbjct: 219 HNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 278

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 279 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 336

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD   VL+  LA +G YP VDPL S S  L  +    +  +    +     R++E +
Sbjct: 337 FAHLDATTVLSXGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKELQ 396

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 397 DIIAILG 403


>gi|159227428|emb|CAJ80505.1| ATP synthase beta subunit [Physalis philadelphica var. immaculata]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   ++R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLNRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|14718161|gb|AAK72819.1| ATP synthase beta subunit [Pangium edule]
          Length = 377

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 19/285 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---DLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSXSTMLQPQIVGEE 367


>gi|315453868|ref|YP_004074138.1| ATP synthase F1 sector subunit alpha [Helicobacter felis ATCC
           49179]
 gi|315132920|emb|CBY83548.1| ATP synthase F1 sector alpha subunit [Helicobacter felis ATCC
           49179]
          Length = 501

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 14/355 (3%)

Query: 75  VGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G G+ I  G  V    +    P      GRVIN LG+PIDG  ++ + D    +  K P
Sbjct: 77  LGAGKNIKEGTSVKRTKQLMKVPVGDAVMGRVINTLGEPIDGKGAI-RADEFRFVEQKAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVII 192
             M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ +         D + I
Sbjct: 136 GIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIINQKGQDVICI 195

Query: 193 SL-VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            + +G++   V + +   E+Y    ++ SVVV A +  SP ++ +AP   VTI EYF   
Sbjct: 196 YVAIGQKESTVAQVVRKLEEY--GAMEYSVVVNAPASTSPAMQYLAPYAGVTIGEYFRDH 253

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GN 306
           G + L+I D +++ A + REI+      P    +P  VF    RLLER      EK  G+
Sbjct: 254 GRHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAKMSDEKGAGS 313

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A  
Sbjct: 314 LTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYSGIRPAINVGLSVSRVGGAAQI 373

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  +L   + ++   R+++    +   +D    K + +   + + LKQ P
Sbjct: 374 KGTKQVAGTLRLDLAQY---RELQAFSQFASDLDEASRKQLERGQRMVEVLKQPP 425


>gi|149384399|gb|ABR25022.1| ATP synthase beta chain [Asplenium juglandifolium]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLSAPYRRGGKIGLSGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R    LTA+T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|14717966|gb|AAK72725.1| ATP synthase beta subunit [Borya septentrionalis]
          Length = 483

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G Y  VDPL S S +       +E  +    +     R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYSAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|312984838|gb|ADR30669.1| ATP synthase beta chain [Melpomene allosuroides]
          Length = 419

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|290745906|gb|ADD51620.1| ATP synthase beta chain [Terpsichore anfractuosa]
          Length = 399

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|227485708|ref|ZP_03916024.1| V family two sector ATPase, V(1) subunit B [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227236263|gb|EEI86278.1| V family two sector ATPase, V(1) subunit B [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 455

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 157/315 (49%), Gaps = 11/315 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISL-GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           G+VI I+ D   +        I+L G  V   GR   ++ S    GR  N LG+ ID   
Sbjct: 42  GRVIEIDKDRAMVQLFEGSSGINLEGTSVRFLGRPLELAVSEDMIGRAFNGLGEVIDDGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D      + + P ++R    +  +TGI  ID    L  GQ++ +F+G+G+  + +
Sbjct: 102 EIIPEDKRDVNGTAINP-VSRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGNGLPHNQV 160

Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +  AR       D    V+ + +G    E + F++D+     + +SV+ +  +D+  I 
Sbjct: 161 AAQIARQAKVLGDDEGFAVVFAAIGITFEEAQFFMDDFKKTGAIDRSVLFINLADDPAIE 220

Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R   P  A+T AEY + + D  VL+I+  +T +A ++RE++    E+P  RGYP  ++++
Sbjct: 221 RLSTPKMALTCAEYLAFEKDMQVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYTD 280

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L  + ER G    + G IT +  + +  D+   PI D    I +G I+L+R L  +G  P
Sbjct: 281 LSTIYERAGKLRGKPGTITQIPILSMPEDDITHPIPDLTGYITEGQIILSRDLYNQGIAP 340

Query: 350 PVDPLASVSRLADKA 364
           PV  L S+SRL DK 
Sbjct: 341 PVSILPSLSRLKDKG 355


>gi|149384529|gb|ABR25087.1| ATP synthase beta chain [Elaphoglossum aubertii]
 gi|149384551|gb|ABR25098.1| ATP synthase beta chain [Elaphoglossum hybridum]
 gi|149384569|gb|ABR25107.1| ATP synthase beta chain [Elaphoglossum piloselloides]
          Length = 415

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 85  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 143

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 144 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 203

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 204 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 261

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 262 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 320

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 321 ELQDIIAILG 330


>gi|42558342|gb|AAS19880.1| ATP synthase beta chain [Grammitis deplanchei]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|313123405|ref|YP_004033664.1| ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279968|gb|ADQ60687.1| ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 503

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 163/355 (45%), Gaps = 20/355 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + + Q   S+++G +I           +G  ++I  GD V   GR    P      GR
Sbjct: 58  GAYGIAQNLESNDVGIII-----------LGKFDDIREGDRVKRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVV 220
            V      GK++L +         D + I + +G++   VR  +E    LG      VV 
Sbjct: 166 LVIGDRKTGKTSLAIDTILNQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVE 225

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              S+ +P+L  +AP +   + E F   G +VL++ D +++ A + RE++      P   
Sbjct: 226 AGPSEPAPMLY-IAPYSGTAMGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGRE 284

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            YP  VF    RLLER     KE   G++TA+  +  +  + +  I  +V SI DG I L
Sbjct: 285 AYPGDVFYLHSRLLERSAKLSKELGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L   G  P +D  ASVSR+   A     KK+  +L   +  + E       G
Sbjct: 345 QSDLFFSGTRPAIDAGASVSRVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG 399


>gi|304373019|ref|YP_003856228.1| ATP synthase subunit alpha [Mycoplasma hyorhinis HUB-1]
 gi|304309210|gb|ADM21690.1| ATP synthase subunit alpha [Mycoplasma hyorhinis HUB-1]
 gi|330723369|gb|AEC45739.1| F0F1 ATP synthase subunit alpha [Mycoplasma hyorhinis MCLD]
          Length = 508

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 29/422 (6%)

Query: 13  EDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           E Y+K N++ + G + ++      V  + + V LG+ V  +   ++  G  I +NL+  Y
Sbjct: 17  ETYNKKNVIAETGKVITVGDGVAIVYGIDK-VKLGELVAFK---NNTYG--IALNLEKDY 70

Query: 72  ICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSM-- 126
           +  V +G E ++  GD V        +P       RV+NALG+PIDG+     GD+S   
Sbjct: 71  VGVVIMGNENAVVEGDEVRRTNLTISTPVGDGMLSRVVNALGEPIDGN-----GDISFTK 125

Query: 127 --EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
             E+ S+ P  M+R+ +++   TGI  ID   P+  GQR  +      GK+ +   ++  
Sbjct: 126 RREVFSEAPSIMSRKAIDRPLNTGILAIDSLVPIGLGQRELIIGDRQTGKTAIAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           +     + +   +G++   + + +     +  ++ + VVVA++ E   L+ +AP   V+I
Sbjct: 186 QKYKNIRCVYVAIGQKNSTIAQIVSKLKKEGAMEYTTVVVASASELAPLQYIAPYVGVSI 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE +   G++VL+I D +T+ A + R ++      P    +P  +F +   LLER     
Sbjct: 246 AEEWMYNGNDVLIIYDDLTKHAIAYRTLSLLLRRPPGREAFPGDIFYQHSYLLERASQLS 305

Query: 302 KEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +E+  G+ITA+  V     + +  I  +V SI DG I +  SL   G+ P +D   SVSR
Sbjct: 306 EERGGGSITALPIVETQAGDISAYIPTNVISITDGQIFMRDSLFNSGQKPAIDVGFSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-YRPGVDLILDKAVHQVPIIYDFLK 418
           +   A +   K+  SSL   + ++ E +     G         +LD+       IY+ LK
Sbjct: 366 VGSSAQTKAMKQASSSLKLQLAQYNEIKAFAQFGSDLGESSQRLLDRGTK----IYELLK 421

Query: 419 QS 420
           Q+
Sbjct: 422 QN 423


>gi|42558338|gb|AAS19878.1| ATP synthase beta chain [Grammitis billardierei]
 gi|42558340|gb|AAS19879.1| ATP synthase beta chain [Grammitis ciliata]
 gi|42558354|gb|AAS19886.1| ATP synthase beta chain [Grammitis pseudociliata]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|42558358|gb|AAS19888.1| ATP synthase beta chain [Grammitis poeppigiana]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|312984778|gb|ADR30639.1| ATP synthase beta chain [Lellingeria myosuroides]
          Length = 392

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 21  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 78

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 79  GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 137

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 138 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 197

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 198 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 255

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 256 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|300811332|ref|ZP_07091829.1| ATP synthase F1, alpha subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497696|gb|EFK32721.1| ATP synthase F1, alpha subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 503

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 163/359 (45%), Gaps = 28/359 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + + Q   S+++G +I           +G  ++I  GD V   GR    P      GR
Sbjct: 58  GAYGIAQNLESNDVGIII-----------LGKFDDIREGDRVKRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------ 216
            V      GK++L +         D + I + +G++   VR  +E      LKK      
Sbjct: 166 LVIGDRKTGKTSLAIDTILNQKGQDVICIYVSIGQKESTVRAQVE-----TLKKFGAMDY 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A   E   +  +AP +   + E F   G +VL++ D +++ A + RE++      
Sbjct: 221 TIVVEAGPSEPAPMLYIAPYSGTAMGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER     KE   G++TA+  +  +  + +  I  +V SI DG
Sbjct: 281 PGREAYPGDVFYLHSRLLERSAKLSKELGGGSLTALPFIQTEAGDISAYIPTNVISITDG 340

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            I L   L   G  P +D  ASVSR+   A     KK+  +L   +  + E       G
Sbjct: 341 QIFLQSDLFFSGTRPAIDAGASVSRVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG 399


>gi|149384761|gb|ABR25189.1| ATP synthase beta chain [Tectaria incisa]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|159227304|emb|CAJ80443.1| ATP synthase beta subunit [Solanum tridynamum]
 gi|159227316|emb|CAJ80449.1| ATP synthase beta subunit [Solanum manaense]
 gi|159227320|emb|CAJ80451.1| ATP synthase beta subunit [Solanum lasiocarpum]
 gi|159227326|emb|CAJ80454.1| ATP synthase beta subunit [Solanum hirsutissimum]
 gi|159227336|emb|CAJ80459.1| ATP synthase beta subunit [Solanum dasyphyllum]
 gi|159227348|emb|CAJ80465.1| ATP synthase beta subunit [Solanum macrocarpon]
 gi|159227352|emb|CAJ80467.1| ATP synthase beta subunit [Brunfelsia sp. S20]
          Length = 336

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 151/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|149384571|gb|ABR25108.1| ATP synthase beta chain [Elaphoglossum samoense]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 88  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 146

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 265 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|149384531|gb|ABR25088.1| ATP synthase beta chain [Elaphoglossum backhousianum]
          Length = 420

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 33  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 89

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 90  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 148

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 149 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 208

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 209 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 266

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 267 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 325

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 326 ELQDIIAILG 335


>gi|13236704|gb|AAK14657.1| ATP synthase beta subunit [Thrinax radiata]
          Length = 498

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 152/308 (49%), Gaps = 16/308 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P  
Sbjct: 105 ATLGRIFNVLGEPVDNLVPVDTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 223

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  
Sbjct: 224 EKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E 
Sbjct: 342 TFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKEL 401

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 402 QDIIAILG 409


>gi|14717974|gb|AAK72729.1| ATP synthase beta subunit [Bruguiera gymnorhiza]
          Length = 384

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 143/283 (50%), Gaps = 15/283 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 95  GATLGRIFNVLGEPVDNLGPVNSRXTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 213

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+++S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 214 NEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 273

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 274 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 331

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 332 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEE 374


>gi|46360730|gb|AAS89146.1| ATP synthase beta subunit [Verdoornia succulenta]
          Length = 267

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 142/270 (52%), Gaps = 17/270 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +  G  +   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 2   SGRIFNVLGEPVDNLGPVNAG--ATFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRR 59

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 60  GGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 119

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 120 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLSIDNIFRFVQAGSE 179

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 180 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 237

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            + LD   VL+R LA +G YP VDPL S S
Sbjct: 238 FAHLDATTVLSRGLAAKGIYPAVDPLDSTS 267


>gi|315020453|gb|ADT70794.1| AtpB [Lellingeria saffordii]
          Length = 379

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 158/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG   + ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVRNSAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 88  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 146

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 265 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|156739810|gb|ABU93558.1| ATP synthase beta subunit [Tectaria subtriphylla]
          Length = 394

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDHIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAMGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|149384567|gb|ABR25106.1| ATP synthase beta chain [Elaphoglossum peltatum]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|149384559|gb|ABR25102.1| ATP synthase beta chain [Elaphoglossum minutum]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|5001579|gb|AAD37036.1|AF092110_1 ATP synthase beta subunit [Buxus sempervirens]
          Length = 479

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 85  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 142 PYRRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 262 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 380 KELQDIIAILG 390


>gi|149384537|gb|ABR25091.1| ATP synthase beta chain [Elaphoglossum crinitum]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 35  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 91

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 92  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 150

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 151 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 210

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 211 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 268

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 269 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 327

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 328 ELQDIIAILG 337


>gi|42558394|gb|AAS19906.1| ATP synthase beta chain [Scleroglossum sulcatum]
 gi|42558396|gb|AAS19907.1| ATP synthase beta chain [Scleroglossum sulcatum]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|21684901|emb|CAD11577.1| ATP synthase beta subunit [Luzula multiflora]
          Length = 485

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 150/305 (49%), Gaps = 20/305 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+PID   +LG  D S +  I    P  ++       F+TGI+V+D+  P
Sbjct: 95  VTLGRIFNVLGEPID---NLGSVDTSTKFPIHRSAPLFIDLDTELSIFETGIKVVDLLAP 151

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 152 YRRGGKIGLFGGAGVGKTILIMELINNIAKGHGGVSVFGGVGERTREGNDLYVEMKESKV 211

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 212 INEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQHVLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+    ERI  +   +G IT++ +V V  D+  DP  
Sbjct: 272 GSEVSALLGRMPSAVGYQPTLSTEMGSFQERI--TSTNRGAITSIQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP V PL S S +       +E  +    +     R++
Sbjct: 330 ATTFAHLDATTVLSRVLASKGIYPAVSPLESTSTMLQPEIVGEEHYETAQRVKQTSQRYK 389

Query: 385 ETRDI 389
           E +DI
Sbjct: 390 ELQDI 394


>gi|261838462|gb|ACX98228.1| ATP synthase F1 alpha chain [Helicobacter pylori 51]
          Length = 503

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 172/370 (46%), Gaps = 14/370 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V H       P      GRV+NALG+PIDG   
Sbjct: 62  GVAANLEEDSVGVIVFGFGNNIKEGTSVKHTKSLMKVPVGDAIVGRVLNALGEPIDGKGE 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 122 IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 180

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +
Sbjct: 181 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RL
Sbjct: 239 APYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P +
Sbjct: 299 LERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  +L   + ++   R+++    +   +D    K + +  
Sbjct: 359 NVGLSVSRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQ 415

Query: 412 IIYDFLKQSP 421
            + + LKQ+P
Sbjct: 416 RMVEVLKQAP 425


>gi|149384557|gb|ABR25101.1| ATP synthase beta chain [Elaphoglossum lonchophyllum]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESGVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|312984780|gb|ADR30640.1| ATP synthase beta chain [Lellingeria myosuroides]
          Length = 405

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 28  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 85

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 86  GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 144

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 145 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 205 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 263 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 321

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 322 LQDIIAILG 330


>gi|290745883|gb|ADD51610.1| ATP synthase beta chain [Terpsichore anfractuosa]
          Length = 410

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|156739808|gb|ABU93557.1| ATP synthase beta subunit [Tectaria decurrens]
          Length = 394

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|189314225|gb|ACD89012.1| ATP synthase beta subunit [Borismene japurensis]
          Length = 467

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 152/306 (49%), Gaps = 20/306 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + L    VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLHATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDI 389
           +E +DI
Sbjct: 377 KELQDI 382


>gi|42558438|gb|AAS19928.1| ATP synthase beta chain [Pecluma alfredii]
          Length = 422

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVRSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+  ++      A++     V   +  ER RE  +   +     + 
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 189

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 190 NEKDISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDFNKQDVLLFIDNIFRFVQAG 249

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 250 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 307

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 308 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 366

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 367 ELQDIIAILG 376


>gi|49182435|gb|AAT57696.1| ATP synthase beta chain [Pellia epiphylla]
          Length = 369

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 140/270 (51%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S  G  G   RE
Sbjct: 35  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSAFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEY       +V
Sbjct: 95  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +    +   + R++E +DI  I    PG+D
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAI----PGLD 297


>gi|328681657|gb|AEB32901.1| ATP synthase beta subunit [Telaranea patentissima]
          Length = 380

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|290745904|gb|ADD51619.1| ATP synthase beta chain [Terpsichore taxifolia]
          Length = 402

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|14717952|gb|AAK72718.1| ATP synthase beta subunit [Barclaya longifolia]
          Length = 385

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  
Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365


>gi|14718128|gb|AAK72803.1| ATP synthase beta subunit [Mesua sp. Chase 677]
          Length = 384

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 144/285 (50%), Gaps = 19/285 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEENIAESKVTLVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSNEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEE 373


>gi|56112421|gb|AAV71165.1| ATP synthase subunit B [Phyllanthus reticulatus]
          Length = 324

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 170

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 171 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 230

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 231 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 288

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 289 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 324


>gi|149384533|gb|ABR25089.1| ATP synthase beta chain [Elaphoglossum burchellii]
 gi|149384549|gb|ABR25097.1| ATP synthase beta chain [Elaphoglossum huacsaro]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|149384541|gb|ABR25093.1| ATP synthase beta chain [Elaphoglossum erinaceum]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|122051547|gb|ABM65876.1| ATP synthase beta chain [Lellingeria subcoriacea]
          Length = 403

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 55  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 112

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 113 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 171

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 172 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 231

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 232 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 289

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 290 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 348

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 349 LQDIIAILG 357


>gi|5758868|gb|AAD50842.1| ATP synthase beta subunit [Cryptanthus zonatus]
          Length = 496

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I R   +
Sbjct: 222 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLADPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD    L+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTALSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|325684412|gb|EGD26580.1| ATP synthase F1 sector alpha subunit [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 506

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 163/355 (45%), Gaps = 20/355 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + + Q   S+++G +I           +G  ++I  GD V   GR    P      GR
Sbjct: 61  GAYGIAQNLESNDVGIII-----------LGKFDDIREGDRVKRTGRIMEVPVGDALIGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 110 VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRE 168

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVV 220
            V      GK++L +         D + I + +G++   VR  +E    LG      VV 
Sbjct: 169 LVIGDRKTGKTSLAIDTILNQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVE 228

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              S+ +P+L  +AP +   + E F   G +VL++ D +++ A + RE++      P   
Sbjct: 229 AGPSEPAPMLY-IAPYSGTAMGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGRE 287

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            YP  VF    RLLER     KE   G++TA+  +  +  + +  I  +V SI DG I L
Sbjct: 288 AYPGDVFYLHSRLLERSAKLSKELGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFL 347

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              L   G  P +D  ASVSR+   A     KK+  +L   +  + E       G
Sbjct: 348 QSDLFFSGTRPAIDAGASVSRVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG 402


>gi|312984732|gb|ADR30616.1| ATP synthase beta chain [Lellingeria brevistipes]
 gi|312984750|gb|ADR30625.1| ATP synthase beta chain [Lellingeria hellwigii]
 gi|312984770|gb|ADR30635.1| ATP synthase beta chain [Lellingeria myosuroides]
 gi|312984772|gb|ADR30636.1| ATP synthase beta chain [Lellingeria myosuroides]
 gi|312984774|gb|ADR30637.1| ATP synthase beta chain [Lellingeria myosuroides]
 gi|312984776|gb|ADR30638.1| ATP synthase beta chain [Lellingeria myosuroides]
          Length = 419

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 89  GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 147

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|322436128|ref|YP_004218340.1| alternate F1F0 ATPase, F1 subunit alpha [Acidobacterium sp.
           MP5ACTX9]
 gi|321163855|gb|ADW69560.1| alternate F1F0 ATPase, F1 subunit alpha [Acidobacterium sp.
           MP5ACTX9]
          Length = 521

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 185/391 (47%), Gaps = 18/391 (4%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            + L      YS +LV +   I  ITS+   +  +S    LG+  +   K+ D LG    
Sbjct: 16  FDELTHACATYSPSLVPE--EIGIITSLSTGIATISGLPNLGNEELVSFKD-DRLGLAFN 72

Query: 65  IN---LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS-L 119
           ++   + ++ +C     +++ +GD V   GR   I       GRV++ LG+PIDG    L
Sbjct: 73  VDEGEVGLILLCDY---QDLHVGDEVRRTGRVMDIGVGNGLLGRVLDPLGRPIDGKPPPL 129

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +  L +E     P  M+R  V    +TG++V+D   P+  GQR  +      GK+ + +
Sbjct: 130 TEHRLPVE--RPAPAIMDRAPVSVPLQTGLKVVDAMIPIGRGQRELILGDRQTGKTAIAT 187

Query: 180 MFARSDCFDKVII--SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
               +     V+     +G+R   V + I +      ++ +VVVVA  + +P L  + P 
Sbjct: 188 DTILNQRGQNVVCVYCAIGQRASSVAKVIANLEEKGAMEYTVVVVAEGNNAPGLVYITPY 247

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G +VL++ D +T+ A + RE++      P    YP  +F    R+LER
Sbjct: 248 AATSIAEYFMEQGRDVLIVYDDLTQHAQAYRELSLLLRRPPGREAYPGDIFYIHSRMLER 307

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                K+   G++TA+  +  D  + +  I  ++ SI DG I L+ +L E G  P VD  
Sbjct: 308 STHLIKDLGGGSLTALPIIETDAQDISAYIPTNLISITDGQIYLSPTLFELGVLPAVDVA 367

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+  +A     + +   L     +FEE
Sbjct: 368 LSVSRVGSQAQKPAYRAVAGDLKLAYSQFEE 398


>gi|149384563|gb|ABR25104.1| ATP synthase beta chain [Elaphoglossum paleaceum]
          Length = 417

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 30  LGRIFNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 86

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 87  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 145

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 146 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 205

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 206 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 263

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 264 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 322

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 323 ELQDIIAILG 332


>gi|62085167|gb|AAX62988.1| ATP synthase beta subunit [Ochna sp. Davis 31-01]
          Length = 359

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 88  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 205 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 358


>gi|282901090|ref|ZP_06309023.1| ATP synthase subunit alpha [Cylindrospermopsis raciborskii CS-505]
 gi|281194181|gb|EFA69145.1| ATP synthase subunit alpha [Cylindrospermopsis raciborskii CS-505]
          Length = 506

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 173/384 (45%), Gaps = 21/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G  I  G  V    +  ++       GR
Sbjct: 60  GTVGIAQNLEEDNVGAVL-----------MGEGRNIQEGSTVTATAKIAQVGVGEALIGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG+ IDG   + K   S  I S  P  + R+ V +  +TGI  ID   P+  GQR 
Sbjct: 109 VVDALGRAIDGKGEI-KATTSRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRE 167

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+++ +         D V + + VG++   V   ++       L+ +VVV 
Sbjct: 168 LIIGDRQTGKTSIAIDTIINQKGEDVVCVYVAVGQKASTVANVVQTLQEKGALEYTVVVA 227

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + +   L+ +AP T  TIAEYF  +G   L+I D +++ A + R+++      P    
Sbjct: 228 ANASDPATLQFLAPYTGATIAEYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREA 287

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG I L+
Sbjct: 288 YPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLS 347

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P V+P  SVSR+   A +   KK+   +   + +F+   D++    +   +
Sbjct: 348 SDLFNSGVRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFD---DLQAFAQFASDL 404

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423
           D      + +   + + LKQ  +D
Sbjct: 405 DKTTQDQLARGQRLRELLKQPQND 428


>gi|328681675|gb|AEB32910.1| ATP synthase beta subunit [Lepidozia laevifolia]
          Length = 380

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|328681661|gb|AEB32903.1| ATP synthase beta subunit [Telaranea palmata]
          Length = 380

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|149384409|gb|ABR25027.1| ATP synthase beta chain [Asplenium planicaule]
          Length = 426

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 154/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRPAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLSAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|32490755|ref|NP_871009.1| F0F1 ATP synthase subunit alpha [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|81741897|sp|Q8D3J5|ATPA_WIGBR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|25165961|dbj|BAC24152.1| atpA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 510

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 185/392 (47%), Gaps = 34/392 (8%)

Query: 62  VIRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
            I +NL+   +  V +G    +S G  V+  GR    P+     GRV+NALG+P+D    
Sbjct: 61  AIALNLEKEIVGAVVMGSYFHLSEGMKVYSTGRILEVPTGNNLLGRVLNALGEPLDS--- 117

Query: 119 LGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KGD+  +  S +    P  ++R  + +  +TG + ID   P+  GQR  +      GK
Sbjct: 118 --KGDILHDCFSPIETIAPGVIDRLSINEPLQTGYKSIDSMVPIGKGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
           S+L   ++  + D   K I   +G++   V + +E     D L  +++V AT+ +S +L+
Sbjct: 176 SSLAIDTIINQKDSNIKCIYVSIGQKFSTVVKTVEKLKEHDALSNTIIVCATASDSAVLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  +F    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDSLIVYDDLSKQAIAYRQISLLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  V   G + +  +  ++ SI DG I L
Sbjct: 296 RLLERSARVNEIYVENFTKGKVKNKSGSLTALPIVETQGGDISSFVPTNLISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P ++P  SVSR+   A +   +KL  ++   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAINPGISVSRVGGSAQTEIIRKLSGNIRTSLAQYNE---LSSFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQ---SPSDLSSE 427
           +D    K +     I + LKQ   SP  LS +
Sbjct: 413 LDDSTKKQLQHGEKIIEILKQKQYSPMSLSKQ 444


>gi|291300942|ref|YP_003512220.1| H(+)-transporting two-sector ATPase [Stackebrandtia nassauensis DSM
           44728]
 gi|290570162|gb|ADD43127.1| H(+)-transporting two-sector ATPase [Stackebrandtia nassauensis DSM
           44728]
          Length = 466

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 11/276 (3%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
           FR+   + W GRV N  G P+DG   +   +      S + P   R    +   TG+ V+
Sbjct: 81  FRVVVGSGWLGRVCNGRGVPVDGGPPILGSERLPVAGSPINPT-RRMPPSEPVHTGVSVV 139

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD-------CFDKVIISLVGERGREVREF 205
           D  T L  GQ++ VF+  G+    L +  A          C     + L        R+ 
Sbjct: 140 DGLTTLVRGQKLPVFSIPGLPHLELATQIAAQAHTGGEPFCVVFAGMGLSHADAAAARDV 199

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
           + +       + V+++ T+DE  I R + P  A+TIAE  +  +G +VL++L  +T +A 
Sbjct: 200 LAERAAAG--ELVLLLNTADEPVIERVVTPRVALTIAENLAFGQGRHVLVVLTDMTSYAE 257

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++RE+AT   ++P  RGYP  ++S+L  L ER G      G++T V  + +   +   P+
Sbjct: 258 ALREVATARHDIPARRGYPGYLYSDLASLYERCGRLRDRPGSVTIVPVLTMPAGDLTHPV 317

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G +VL+      G YPPVDPLAS+SRL
Sbjct: 318 PDLTGYITEGQVVLSARAHGSGVYPPVDPLASLSRL 353


>gi|182623933|ref|ZP_02951721.1| ATP synthase F1, alpha subunit [Clostridium perfringens D str.
           JGS1721]
 gi|177910826|gb|EDT73180.1| ATP synthase F1, alpha subunit [Clostridium perfringens D str.
           JGS1721]
          Length = 502

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 7/333 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G  E I  GD+V   G+    P      GRV+N+LG+PIDG  
Sbjct: 60  FGMALNLEQDNVGCVLLGSEEGIKEGDIVKRTGKIVEVPVGEDLIGRVVNSLGQPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K D    I    P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 PI-KNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAI 178

Query: 178 -LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
            +         D + I + +G++   V   +     +  +  S+VV A++ ES  L+ +A
Sbjct: 179 AIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  T+ EYF +KG +VL+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 239 PYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLL 298

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P V+
Sbjct: 299 ERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P  SVSR+   A     K++  +L   + ++ E
Sbjct: 359 PGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE 391


>gi|159227380|emb|CAJ80481.1| ATP synthase beta subunit [Physalis sp. P143]
 gi|159227384|emb|CAJ80483.1| ATP synthase beta subunit [Physalis sp. P141]
 gi|159227414|emb|CAJ80498.1| ATP synthase beta subunit [Physalis philadelphica var. immaculata]
          Length = 336

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 151/301 (50%), Gaps = 20/301 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 40  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 97  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P  
Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTVPAP 274

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334

Query: 385 E 385
           E
Sbjct: 335 E 335


>gi|3850940|gb|AAC72162.1| ATP synthase beta subunit [Triunia montana]
          Length = 386

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365


>gi|312984826|gb|ADR30663.1| ATP synthase beta chain [Lellingeria tenuicula]
          Length = 419

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|156739790|gb|ABU93548.1| ATP synthase beta subunit [Elaphoglossum mcclurei]
          Length = 391

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 93  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 151

Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 152 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 211

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 212 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 269

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 270 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 328

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 329 ELQDIIAILG 338


>gi|37720945|gb|AAN32475.1| ATP synthase beta subunit [Burmannia capitata]
          Length = 477

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K+ D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 30  KSRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGSPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+ +D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 90  IFNVLGETVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAPYRRGG 146

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 206

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI
Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 384

Query: 390 RLIGG 394
             I G
Sbjct: 385 IAILG 389


>gi|18311171|ref|NP_563105.1| F0F1 ATP synthase subunit alpha [Clostridium perfringens str. 13]
 gi|110799900|ref|YP_696868.1| F0F1 ATP synthase subunit alpha [Clostridium perfringens ATCC
           13124]
 gi|168205574|ref|ZP_02631579.1| ATP synthase F1, alpha subunit [Clostridium perfringens E str.
           JGS1987]
 gi|168210119|ref|ZP_02635744.1| ATP synthase F1, alpha subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|168213707|ref|ZP_02639332.1| ATP synthase F1, alpha subunit [Clostridium perfringens CPE str.
           F4969]
 gi|168215818|ref|ZP_02641443.1| ATP synthase F1, alpha subunit [Clostridium perfringens NCTC 8239]
 gi|169344183|ref|ZP_02865165.1| ATP synthase F1, alpha subunit [Clostridium perfringens C str.
           JGS1495]
 gi|20137354|sp|Q8XID2|ATPA_CLOPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123049637|sp|Q0TNC2|ATPA_CLOP1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|18145854|dbj|BAB81895.1| ATP synthase alpha subunit [Clostridium perfringens str. 13]
 gi|110674547|gb|ABG83534.1| ATP synthase F1, alpha subunit [Clostridium perfringens ATCC 13124]
 gi|169297641|gb|EDS79741.1| ATP synthase F1, alpha subunit [Clostridium perfringens C str.
           JGS1495]
 gi|170662849|gb|EDT15532.1| ATP synthase F1, alpha subunit [Clostridium perfringens E str.
           JGS1987]
 gi|170711744|gb|EDT23926.1| ATP synthase F1, alpha subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|170714802|gb|EDT26984.1| ATP synthase F1, alpha subunit [Clostridium perfringens CPE str.
           F4969]
 gi|182382309|gb|EDT79788.1| ATP synthase F1, alpha subunit [Clostridium perfringens NCTC 8239]
          Length = 502

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 7/333 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G  E I  GD+V   G+    P      GRV+N+LG+PIDG  
Sbjct: 60  FGMALNLEQDNVGCVLLGSEEGIKEGDIVKRTGKIVEVPVGEDLIGRVVNSLGQPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K D    I    P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 PI-KNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAI 178

Query: 178 -LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
            +         D + I + +G++   V   +     +  +  S+VV A++ ES  L+ +A
Sbjct: 179 AIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  T+ EYF +KG +VL+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 239 PYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLL 298

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P V+
Sbjct: 299 ERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P  SVSR+   A     K++  +L   + ++ E
Sbjct: 359 PGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE 391


>gi|290745881|gb|ADD51609.1| ATP synthase beta chain [Terpsichore anfractuosa]
          Length = 411

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|290745843|gb|ADD51591.1| ATP synthase beta chain [Terpsichore amphidasyon]
          Length = 383

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 68  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 125

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 126 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 185

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 186 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 245

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 246 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 303

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 304 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 362

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 363 QDIIAILG 370


>gi|225019282|ref|ZP_03708474.1| hypothetical protein CLOSTMETH_03235 [Clostridium methylpentosum
           DSM 5476]
 gi|224947913|gb|EEG29122.1| hypothetical protein CLOSTMETH_03235 [Clostridium methylpentosum
           DSM 5476]
          Length = 469

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 160/329 (48%), Gaps = 26/329 (7%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVIN 107
           +H    S  LG++++I    V +        +SLG+    F      +  S    GR+ N
Sbjct: 32  LHLENGSVRLGRIVQIMGKRVVVQVFEGTNTLSLGNTTTRFTGKPMEMPLSKELLGRIFN 91

Query: 108 ALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
             GKPIDG   LG    D   +I  +    ++R       +TGI  ID    L  GQ++ 
Sbjct: 92  GAGKPIDG---LGDIYPDTYADINGQPINPVSRTYPRNYIRTGISSIDALMTLIRGQKLP 148

Query: 166 VFAGSGIGKSTLLSMFARSDCFDK-------VIISLVGERGREVREFIEDYLGDNLKKSV 218
           +F+ SG+  + L     R     +       ++ + +G     V+  + DY     ++S 
Sbjct: 149 IFSDSGLSHNKLAVQIVRQAKIAEEAGQGFAIVFAAMG-----VKNDVADYFKAKFEESG 203

Query: 219 VV------VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
           V+      +  S++  I R + P  A+T AEY + + + ++L+IL  +T +A ++RE ++
Sbjct: 204 VLERVAMFINLSNDPIIERILTPRCALTAAEYLAYQHNMHILVILTDMTSYAEAVREFSS 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE+P  +GYP  ++S+   L ER G  +   G++T +  + +   +   PI D    I
Sbjct: 264 SKGEIPGRKGYPGYLYSDFASLYERAGVIKGSTGSVTQIPILTMPNGDITHPIPDLTGYI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +G IVL+R LA++G YPP+  L S+SRL
Sbjct: 324 TEGQIVLDRDLAQQGIYPPIAVLPSLSRL 352


>gi|315020464|gb|ADT70800.1| AtpB [Lellingeria subcoriacea]
          Length = 379

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 89  GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 147

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|149384735|gb|ABR25176.1| ATP synthase beta chain [Serpocaulon fraxinifolium]
          Length = 426

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +  V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAAYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|42558418|gb|AAS19918.1| ATP synthase beta chain [Terpsichore semihirsuta]
          Length = 422

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|21667286|gb|AAM74010.1| ATP synthase beta chain [Adenophorus haalilioanus]
 gi|21667288|gb|AAM74011.1| ATP synthase beta chain [Adenophorus oahuensis]
          Length = 422

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|312984865|gb|ADR30682.1| ATP synthase beta chain [Terpsichore nana]
          Length = 419

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 29  TTLGRISNVLGEPVDNLGPVRSSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 86

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+        
Sbjct: 87  RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 146

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 265 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|110801696|ref|YP_699464.1| F0F1 ATP synthase subunit alpha [Clostridium perfringens SM101]
 gi|122956534|sp|Q0SQZ3|ATPA_CLOPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110682197|gb|ABG85567.1| ATP synthase F1, alpha subunit [Clostridium perfringens SM101]
          Length = 502

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 7/333 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G  E I  GD+V   G+    P      GRV+N+LG+PIDG  
Sbjct: 60  FGMALNLEQDNVGCVLLGSEEGIKEGDIVKRTGKIVEVPVGEDLIGRVVNSLGQPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K D    I    P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 PI-KNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAI 178

Query: 178 -LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
            +         D + I + +G++   V   +     +  +  S+VV A++ ES  L+ +A
Sbjct: 179 AIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  T+ EYF +KG +VL+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 239 PYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLL 298

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P V+
Sbjct: 299 ERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P  SVSR+   A     K++  +L   + ++ E
Sbjct: 359 PGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE 391


>gi|14718101|gb|AAK72790.1| ATP synthase beta subunit [Lacistema aggregatum]
          Length = 385

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 23/287 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---DLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 209

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    VA S         +E P  R    LTA+T+AEYF    + +VLL +D+I RF
Sbjct: 210 SGVINEKNVAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 327

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           P   +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEE 374


>gi|328681587|gb|AEB32866.1| ATP synthase beta subunit [Pseudocephalozia paludicola]
          Length = 365

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 20  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 79

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA T+AEYF      +V
Sbjct: 80  GNDLYMEMKESKVTNEQNISESKVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDV 139

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 140 LLFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 197

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 198 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 256

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 257 ETAQGVKQTLQRYKELQDIIAILG 280


>gi|169260998|gb|ACA52099.1| ATP synthase beta subunit [Marsilea drummondii]
          Length = 288

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 147/283 (51%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S       P PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283


>gi|149384799|gb|ABR25208.1| ATP synthase beta chain [Thelypteris longissima]
          Length = 426

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLSFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|14718058|gb|AAK72770.1| ATP synthase beta subunit [Freycinetia scandens]
          Length = 483

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+             +S++G  G   R+  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIXXXXXXXAKAHGGVSVIGGVGERTRKGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L  +I  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQRKI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|42558314|gb|AAS19866.1| ATP synthase beta chain [Ceradenia spixiana]
          Length = 422

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|42558426|gb|AAS19922.1| ATP synthase beta chain [Terpsichore sp. Leon 3651]
          Length = 422

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|290745955|gb|ADD51643.1| ATP synthase beta chain [Terpsichore sp. Sundue 1160]
          Length = 410

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|290745908|gb|ADD51621.1| ATP synthase beta chain [Terpsichore david-smithii]
          Length = 388

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|42558408|gb|AAS19913.1| ATP synthase beta chain [Terpsichore lanigera]
          Length = 422

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S+   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVQSSVIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|29726130|gb|AAD00592.2| ATP synthase beta subunit [Eschscholzia californica]
          Length = 484

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 267 AGSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 384

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 385 KELQDIIAILG 395


>gi|290745928|gb|ADD51631.1| ATP synthase beta chain [Terpsichore sp. MAS-2010b]
          Length = 409

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|311085756|gb|ADP65838.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 512

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 151/301 (50%), Gaps = 17/301 (5%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRV+NALG PIDG DS+ + D    + +  P  ++R+ V +  +TG +VID   P+  
Sbjct: 103 FLGRVVNALGFPIDGKDSI-QHDGFFPVEADAPGVIDRKSVNQPIQTGYKVIDSMIPIGR 161

Query: 161 GQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           GQR  +      GK+ L   ++  +     K I   +G++   +   ++    +N L  +
Sbjct: 162 GQRELIIGDRQTGKTALAIDTIINQKQSGIKCIYVAIGQKLSTIINVVKKLEENNALFNT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++VVA++ E+  L+ +AP +   +AE+F +KG++ L+I D +++ A + R+I+      P
Sbjct: 222 IIVVASASEAASLQYLAPYSGCAMAEFFRNKGEDSLIIYDDLSKHAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE-------------KGNITAVISVLVDGDNHNDPI 324
               +P  +F    RLLER      E              G+ITA+  +     + +  +
Sbjct: 282 GREAFPGDIFYLHSRLLERASRVSMEYVQKITKNKITGKTGSITALPIIETQSGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL S +   + +++
Sbjct: 342 PTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGSAAQTTIIKKLSSGIRTALAQYQ 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|257462663|ref|ZP_05627072.1| V-type ATP synthase subunit B [Fusobacterium sp. D12]
 gi|317060310|ref|ZP_07924795.1| ATP synthase subunit beta [Fusobacterium sp. D12]
 gi|313685986|gb|EFS22821.1| ATP synthase subunit beta [Fusobacterium sp. D12]
          Length = 458

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 147/279 (52%), Gaps = 17/279 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           S    GR+ + LG PID   ++    K D++   ++ V    +R    +  +TGI  ID 
Sbjct: 82  SEDMIGRIFDGLGNPIDQGPNIIPEKKVDINGSPINPV----SRDYPSEFIQTGISTIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIE 207
              L  GQ++ +F+GSG+  + + +  AR        D F  V+ + +G    E + F +
Sbjct: 138 LNTLVRGQKLPIFSGSGLPHNNVAAQIARQAKVLGEGDKF-AVVFAAMGITFEEAQFFRD 196

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHS 265
           D+     + ++V+ +  +D+  I R   P  A+T AEY +  KG +VL+IL  +T +A +
Sbjct: 197 DFTRTGAIDRAVLFMNLADDPAIERISTPRMALTCAEYLAFEKGMHVLVILTDLTNYAEA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +RE++    E+P  RGYP  ++++L +L ER G  +   G+IT +  + +  D+   PI 
Sbjct: 257 LREVSAARKEVPGRRGYPGYLYTDLSQLYERAGRIKGRPGSITQIPILTMPEDDITHPIP 316

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           D    I +G I+L+R L + G  PP+  + S+SRL DK 
Sbjct: 317 DLTGYITEGQIILSRELYKSGIEPPIFVIPSLSRLKDKG 355


>gi|49182410|gb|AAT57684.1| ATP synthase beta chain [Dendrohypopterygium arbuscula]
          Length = 369

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 19/294 (6%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 5   DNLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 64

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV--VVAT 223
           + L+     +       +S+ G  G   RE  + Y+          +N+ +S V  V   
Sbjct: 65  TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQ 124

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 125 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 184

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 185 QPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFTHLDATTVLSRGL 242

Query: 343 AEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           A +G YP VDPL S S +  + W    D  +    +   + R++E +DI  I G
Sbjct: 243 AAKGIYPAVDPLDSTSTML-QPWIVGEDHYETAQGVKQTLQRYKELQDIIAILG 295


>gi|21667290|gb|AAM74012.1| ATP synthase beta chain [Adenophorus pinnatifidus]
 gi|21667296|gb|AAM74015.1| ATP synthase beta chain [Adenophorus hymenophylloides]
          Length = 422

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|21667294|gb|AAM74014.1| ATP synthase beta chain [Adenophorus epigaeus]
 gi|21667298|gb|AAM74016.1| ATP synthase beta chain [Adenophorus montanus]
 gi|21667300|gb|AAM74017.1| ATP synthase beta chain [Adenophorus tamariscinus]
          Length = 422

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|156069297|gb|ABU44852.1| ATP synthase beta subunit [Polystichum hookerianum]
 gi|156739692|gb|ABU93499.1| ATP synthase beta subunit [Polystichum lachenense]
          Length = 394

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALPGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S +  + W A E+   +   +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDIAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|241667746|ref|ZP_04755324.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876290|ref|ZP_05249000.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842311|gb|EET20725.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 513

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 18/346 (5%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
           D  G  + +N D V    +G  E I  GD  +  GR    P      GRV++ALG PIDG
Sbjct: 58  DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDG 117

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     S  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK+
Sbjct: 118 RGEIETAH-SSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
            +   ++  +     K I   +G++   +   +        ++ +++V AT+ +S  L+ 
Sbjct: 177 AIAIDAIINQKGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    ++ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 237 IAPYAGCSMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 296

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 297 LLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLE 356

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             L   G  P ++P  SVSR+   A +   KKL   +   + +F E
Sbjct: 357 TDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQFRE 402


>gi|290745920|gb|ADD51627.1| ATP synthase beta chain [Terpsichore taxifolia]
 gi|290745946|gb|ADD51639.1| ATP synthase beta chain [Terpsichore sp. MAS-2010c]
          Length = 408

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|290745898|gb|ADD51616.1| ATP synthase beta chain [Terpsichore aff. semihirsuta MAS-2010]
          Length = 370

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 155/302 (51%), Gaps = 20/302 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 74  GRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 131

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           
Sbjct: 132 GKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQ 191

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 192 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 251

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 252 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 309

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 310 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 368

Query: 388 DI 389
           DI
Sbjct: 369 DI 370


>gi|189485469|ref|YP_001956410.1| F0F1-type ATP synthase alpha subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287428|dbj|BAG13949.1| F0F1-type ATP synthase alpha subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 513

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 163/349 (46%), Gaps = 13/349 (3%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
           +++G V+ I+ D V I  +     I  G  V   G+   I+ S    GRVIN LG+PIDG
Sbjct: 56  ESIGFVLNIDEDYVSIVLLKNSGHIVRGMKVKSTGKVLSIAVSYKLIGRVINTLGQPIDG 115

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           ++      +   +    P  + R  V+   KTGI+ ID  TP+  GQR  +    G GK+
Sbjct: 116 NELKHIDSVHYPVEKIAPGIIQRNSVDNPLKTGIKAIDAMTPIGRGQRELIIGDRGTGKT 175

Query: 176 -----TLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
                T+++   + D   K +I +   +G++   +         +  +  +VV+ AT+ E
Sbjct: 176 AIAVDTIINQ-KKLDMGLKSVICIYCSIGQKKSNLASITAKLKEEGAMDYTVVIAATASE 234

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ +APL A  I EYF  KG +VL++ D +T+ A + R+I+           YP  +
Sbjct: 235 PASMQYIAPLAACAIGEYFMDKGKDVLVVYDDLTKHAWAYRQISLLIKRPAGREAYPGDI 294

Query: 287 FSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G +TA+  +   G++ +  I  +V SI DG I L   L  
Sbjct: 295 FYLHSRLLERAARMSDKNGGGTLTALPIIETQGNDMSAYIPTNVVSITDGQIYLEADLFN 354

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            G  P ++   SVSR+   A +   K+L   +   + +F E +     G
Sbjct: 355 SGIRPAINVGLSVSRVGGAAQTKSMKQLAGPVRLELSQFRELQSFTQFG 403


>gi|328681613|gb|AEB32879.1| ATP synthase beta subunit [Kurzia brevicalycina]
          Length = 380

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+PID   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPID---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|328681669|gb|AEB32907.1| ATP synthase beta subunit [Lepidozia sp. 2 Shaw 5789]
          Length = 380

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|290745953|gb|ADD51642.1| ATP synthase beta chain [Terpsichore semihirsuta]
          Length = 410

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|290745918|gb|ADD51626.1| ATP synthase beta chain [Terpsichore aff. alsopteris MAS-2010]
          Length = 395

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|156739812|gb|ABU93559.1| ATP synthase beta subunit [Tectaria variolosa]
          Length = 389

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYM--EMKESKV 145

Query: 220 V---------VATS----DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           +         VA++    +E P  R     TA+T+AEYF      +VLL +D I RF  +
Sbjct: 146 INEQNISESKVASAYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDHIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 206 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 264 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|42558320|gb|AAS19869.1| ATP synthase beta chain [Cochlidium seminudum]
          Length = 422

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVTSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|167627184|ref|YP_001677684.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189081301|sp|B0TWS5|ATPA_FRAP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167597185|gb|ABZ87183.1| H(+)-transporting two-sector ATPase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 513

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 18/346 (5%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
           D  G  + +N D V    +G  E I  GD  +  GR    P      GRV++ALG PIDG
Sbjct: 58  DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPIDG 117

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     S  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK+
Sbjct: 118 RGEIETAH-SSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
            +   ++  +     K I   +G++   +   +        ++ +++V AT+ +S  L+ 
Sbjct: 177 AIAIDAIINQKGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    ++ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 237 IAPYAGCSMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 296

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 297 LLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFLE 356

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             L   G  P ++P  SVSR+   A +   KKL   +   + +F E
Sbjct: 357 TDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQFRE 402


>gi|159227276|emb|CAJ80429.1| ATP synthase beta subunit [Solanum pinnatisectum]
 gi|159227294|emb|CAJ80438.1| ATP synthase beta subunit [Solanum jamesii]
 gi|159227296|emb|CAJ80439.1| ATP synthase beta subunit [Solanum bulbocastanum]
          Length = 336

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 20/302 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 333

Query: 384 EE 385
           +E
Sbjct: 334 KE 335


>gi|14717999|gb|AAK72741.1| ATP synthase beta subunit [Celtis yunnanensis]
          Length = 386

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365


>gi|328681665|gb|AEB32905.1| ATP synthase beta subunit [Lepidozia spinosissima]
          Length = 380

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|189220434|ref|YP_001941074.1| F0F1 ATP synthase subunit beta [Methylacidiphilum infernorum V4]
 gi|189187292|gb|ACD84477.1| F0F1-type ATP synthase, beta subunit [Methylacidiphilum infernorum
           V4]
          Length = 467

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 166/318 (52%), Gaps = 28/318 (8%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIR 150
           + PS    GR+ N LG+PID      KGD+  E    I    P  +++       +TGI+
Sbjct: 84  VGPSVL--GRIFNVLGEPIDE-----KGDVRAEKRLPIHRPAPSLLDQDIKATILETGIK 136

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI 206
           VID+  P   G ++G F G+G+GK+     L++  A++     V  S VGER RE  +  
Sbjct: 137 VIDLICPFLRGGKVGAFGGAGVGKTVVIMELINNIAKAHGGFSVF-SGVGERTREGNDLY 195

Query: 207 EDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILD 257
            +         D+L KS V  V    +E P  R    L+ +T+AEYF  +   +VLL +D
Sbjct: 196 NEMAEAKVIDLDDLSKSKVALVYGQMNEPPGARLRVGLSGLTMAEYFRDEMKQDVLLFID 255

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF+ +  E++   G  P A GY  ++ SE+  L ERI  +    G+IT+  +V V  
Sbjct: 256 NIFRFSQAGSEVSALLGRTPSAVGYQPTLASEMGALQERI--TSTRNGSITSFQAVYVPA 313

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSL 376
           D+  DP   +  + LD  IVL RS+AE+G YP VDPLAS S+ L+ +    +  ++   +
Sbjct: 314 DDLTDPAPANTFAHLDSTIVLERSIAEQGIYPAVDPLASTSKALSPEIVGQEHYEVARGV 373

Query: 377 THLIHRFEETRDIRLIGG 394
             ++ R+++ +DI  I G
Sbjct: 374 QRVLQRYKDLQDIIAILG 391


>gi|189314187|gb|ACD88993.1| ATP synthase beta subunit [Stephania rotunda]
          Length = 384

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 206 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359


>gi|149384801|gb|ABR25209.1| ATP synthase beta chain [Thelypteris meniscioides]
          Length = 426

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 152/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|290745845|gb|ADD51592.1| ATP synthase beta chain [Grammitis melanoloma]
          Length = 421

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVTSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 131 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 189

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 190 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 249

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 250 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 307

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 308 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 366

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 367 LQDIIAILG 375


>gi|169260996|gb|ACA52098.1| ATP synthase beta subunit [Lygodium japonicum]
          Length = 326

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 143/283 (50%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V+D+  P  
Sbjct: 43  LGRIFNVLGEPVD---NLGPVEGGTTFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPYR 99

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 100 RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 159

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 160 EQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 219

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 220 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 277

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +  D   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 278 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 319


>gi|290745896|gb|ADD51615.1| ATP synthase beta chain [Terpsichore aff. semihirsuta MAS-2010]
          Length = 408

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|322718702|gb|ADX07363.1| ATP synthase beta chain [Leucotrichum mitchellae]
 gi|322718704|gb|ADX07364.1| ATP synthase beta chain [Leucotrichum mitchellae]
          Length = 419

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 157/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG     ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVRSTAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 88  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 146

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 265 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|42558412|gb|AAS19915.1| ATP synthase beta chain [Terpsichore lehmanniana]
          Length = 422

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 154/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +    +S  I    P  +        F+TGI+V+D+  P   G
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAIS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRG 132

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           
Sbjct: 133 GKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 192

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 193 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 252

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 253 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 310

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 311 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 369

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 370 DIIAILG 376


>gi|290745873|gb|ADD51605.1| ATP synthase beta chain [Melpomene sp. ML-2008c]
          Length = 391

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 156/312 (50%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 43  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 97

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 98  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 156

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 157 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 216

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 217 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 274

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 275 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 333

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 334 YKELQDIIAILG 345


>gi|153853603|ref|ZP_01994983.1| hypothetical protein DORLON_00974 [Dorea longicatena DSM 13814]
 gi|149753758|gb|EDM63689.1| hypothetical protein DORLON_00974 [Dorea longicatena DSM 13814]
          Length = 466

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 179/363 (49%), Gaps = 27/363 (7%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +F+V    ++  +G+++ ++ D   I      E +SL +    L  H     ++ S    
Sbjct: 31  EFIVDH--DTRKMGRIVELDEDKAVIQVFEGTENMSLDNTHTRLTGH--PMEVAVSEEML 86

Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160
           GR  N +G+ IDG   LG   D     ++ +P    R+   + + +TGI  ID  T L  
Sbjct: 87  GRTFNGIGEAIDG---LGPITDAEKRDVNGLPLNPVRREYPRNYIRTGISAIDGLTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERG--REVREFIEDYLGDN- 213
           GQ++ +F+G+G+    L +   +     D  D+    + G  G   +V EF      ++ 
Sbjct: 144 GQKLPIFSGNGLPHDQLAAQIVKQASLGDNSDEQFAVVFGAMGVKHDVAEFFRKTFEESG 203

Query: 214 LKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271
           +   V +       P++ ++  P  A+T+AEY +  K  ++L+IL  +T FA ++RE+++
Sbjct: 204 VADHVCMFLNLANDPVVERLITPKVALTVAEYLAFEKNMHILVILTDMTSFAEAMREVSS 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE+P  +GYP  ++SEL  + ER G  +   G++T +  + +  D+   PI D    I
Sbjct: 264 SRGEIPSRKGYPGYLYSELATIYERAGIVDGANGSVTQLPILTMPNDDITHPIPDLTGYI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWS-ADEKKLVSSLTHLIHRFEET 386
            +G IVL+R+L  +  YPP+  L S+SRL      K ++  D + L + L     +  E 
Sbjct: 324 TEGQIVLDRNLHGQAVYPPISILPSLSRLMKDGIGKGYTREDHQDLANQLFSAYAKVGEA 383

Query: 387 RDI 389
           R++
Sbjct: 384 RNL 386


>gi|14717986|gb|AAK72735.1| ATP synthase beta subunit [Camellia japonica]
          Length = 383

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 364


>gi|312285225|gb|ADQ64354.1| ATP synthase beta subunit [Elephantomene eburnea]
          Length = 359

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR  N LG+PID   +LG  D   +  I    P  +   +    F+TGI+V+D+  
Sbjct: 82  GVTLGRFFNVLGEPID---NLGPVDSRTTSPIHRSAPAFIQLDKKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 352


>gi|312984862|gb|ADR30681.1| ATP synthase beta chain [Terpsichore dilatata]
          Length = 419

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|290745859|gb|ADD51599.1| ATP synthase beta chain [Lellingeria major]
 gi|290745893|gb|ADD51614.1| ATP synthase beta chain [Terpsichore aff. semihirsuta MAS-2010]
 gi|290745900|gb|ADD51617.1| ATP synthase beta chain [Terpsichore aff. semihirsuta MAS-2010]
 gi|290745912|gb|ADD51623.1| ATP synthase beta chain [Terpsichore aff. alsopteris MAS-2010]
 gi|290745914|gb|ADD51624.1| ATP synthase beta chain [Terpsichore aff. alsopteris MAS-2010]
 gi|290745916|gb|ADD51625.1| ATP synthase beta chain [Terpsichore aff. alsopteris MAS-2010]
 gi|290745922|gb|ADD51628.1| ATP synthase beta chain [Terpsichore attenuatissima]
 gi|290745924|gb|ADD51629.1| ATP synthase beta chain [Terpsichore attenuatissima]
 gi|290745926|gb|ADD51630.1| ATP synthase beta chain [Terpsichore attenuatissima]
 gi|290745951|gb|ADD51641.1| ATP synthase beta chain [Terpsichore praeceps]
          Length = 411

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|312984842|gb|ADR30671.1| ATP synthase beta chain [Melpomene firma]
 gi|312984854|gb|ADR30677.1| ATP synthase beta chain [Melpomene pilosissima]
          Length = 419

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 156/312 (50%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 31  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 86  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 144

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 145 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 204

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 205 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 262

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 263 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 321

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 322 YKELQDIIAILG 333


>gi|290745871|gb|ADD51604.1| ATP synthase beta chain [Melpomene firma]
          Length = 411

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 156/312 (50%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 73  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 127

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 128 YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 186

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 187 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 246

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 305 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 363

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 364 YKELQDIIAILG 375


>gi|149384503|gb|ABR25074.1| ATP synthase beta chain [Ctenitis sp. Schuettpelz 522]
          Length = 426

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|282600935|ref|ZP_05980210.2| ATP synthase F1, alpha subunit [Subdoligranulum variabile DSM
           15176]
 gi|282570085|gb|EFB75620.1| ATP synthase F1, alpha subunit [Subdoligranulum variabile DSM
           15176]
          Length = 511

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 157/345 (45%), Gaps = 7/345 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           +S   G    +  + V I  +G    I  GD +   G+    P      GRV+NALG+PI
Sbjct: 61  DSGTYGMAQNLEENSVSIVLLGDDSGIKEGDGIRRTGKVVSVPVGEKMIGRVVNALGQPI 120

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   D    I S  P  ++RQ V++  +TGI+ ID   P+  GQR  +      G
Sbjct: 121 DGKGPIEAADYRA-IESPAPGIIDRQPVKQPLQTGIKAIDSMIPIGRGQRELIIGDRQTG 179

Query: 174 KSTLLS-MFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           K+ + +         D + I + +G++   V   +E+   +  +  + VV AT+ E   L
Sbjct: 180 KTVIATDTIINQKGKDVLCIYVAIGQKRSTVASLVENLEKNGAMAYTTVVCATASELSPL 239

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP     + EYF  KG +VL+I D +++ A + R ++      P    YP  VF   
Sbjct: 240 QYIAPYAGCAMGEYFMQKGKHVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLH 299

Query: 291 PRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      EK  G++TA+  +     +    I  +V SI DG I L   L   G  
Sbjct: 300 SRLLERAAKLSDEKGGGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETELFHAGIR 359

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           P V+P  SVSR+   A     KK+  +L  +  ++ E +     G
Sbjct: 360 PAVNPGISVSRVGGNAQIKAMKKVAGTLKLIYSQYRELQGFAQFG 404


>gi|149384605|gb|ABR25125.1| ATP synthase beta chain [Polystichum hillebrandii]
          Length = 426

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S  G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSASGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|122051529|gb|ABM65867.1| ATP synthase beta chain [Grammitis holttumii]
          Length = 413

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 65  LGRIFNVLGEPVDNLGPVRSNSISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 122

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 123 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 182

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 183 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 242

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++     +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 243 VSALLDRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 300

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 301 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 359

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 360 QDIIAILG 367


>gi|99640451|emb|CAJ45080.1| putative beta subunit of chloroplast ATP synthase [Cibotium
           schiedei]
          Length = 493

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 168/336 (50%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D   P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDPSAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESEVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHPDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 400 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|328681695|gb|AEB32920.1| ATP synthase beta subunit [Bazzania nitida]
          Length = 365

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 154/295 (52%), Gaps = 21/295 (7%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 3   DNLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 62

Query: 175 STLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKSVV--VVA 222
           + L+    +  A++     V   +  ER RE      E  E  + D  N+ +S V  V  
Sbjct: 63  TVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISESKVALVYG 121

Query: 223 TSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A G
Sbjct: 122 QMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVG 181

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R 
Sbjct: 182 YQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRG 239

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 240 LAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 293


>gi|229551977|ref|ZP_04440702.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus LMS2-1]
 gi|258539391|ref|YP_003173890.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus Lc 705]
 gi|229314712|gb|EEN80685.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus LMS2-1]
 gi|257151067|emb|CAR90039.1| ATP synthase A chain [Lactobacillus rhamnosus Lc 705]
          Length = 509

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 157/337 (46%), Gaps = 17/337 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I  +G  +EI  GD V   GR    P      GRV+N+LG+P+DG  +
Sbjct: 61  GMALNLETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGEAMIGRVVNSLGQPVDGLGT 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+++ 
Sbjct: 121 I-KTDKTRPIEFKAPGVMQRQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSDESPIL 230
             ++  + D     +   +G++   VR  +E      LKK      ++V+ A   E   +
Sbjct: 180 IDTILNQKDQNMICVYVAIGQKDSTVRAQVE-----TLKKYGAMDYTIVLTAGPSEPAPM 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + E F   G +VL++ D +++ A S RE++      P    YP  +F   
Sbjct: 235 LYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 295 SRLLERAAKLSDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P +D  ASVSR+   A     KK+  +L   +  F E
Sbjct: 355 PAIDAGASVSRVGGDAQVKAMKKVAGTLRLDLASFRE 391


>gi|149384719|gb|ABR25168.1| ATP synthase beta chain [Pleopeltis macrocarpa]
 gi|149384723|gb|ABR25170.1| ATP synthase beta chain [Polypodium sanctae-rosae]
          Length = 426

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|157272377|gb|ABV27015.1| ATP synthase beta chain [Azolla microphylla]
          Length = 384

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 158/304 (51%), Gaps = 22/304 (7%)

Query: 107 NALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRI 164
           N LG+P+D   ++G  +  ++  + +  PA  +   +   F+TGI+V+D+  P   G +I
Sbjct: 1   NVLGEPVD---NMGPVESCIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 57

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ 
Sbjct: 58  GLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEENIS 117

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++  
Sbjct: 118 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSAL 177

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 178 SGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHL 235

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRDIR 390
           D   VL+R  A +G YP VDPL S S +  + W   A+  +    +   + R++E +DI 
Sbjct: 236 DATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKELQDII 294

Query: 391 LIGG 394
            I G
Sbjct: 295 AILG 298


>gi|122051543|gb|ABM65874.1| ATP synthase beta chain [Lellingeria major]
          Length = 413

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 65  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 122

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 123 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 182

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      + LL +D+I RF  +  E
Sbjct: 183 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDALLFIDNIFRFVQAGSE 242

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 243 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 300

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 301 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 359

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 360 QDIIAILG 367


>gi|42558350|gb|AAS19884.1| ATP synthase beta chain [Grammitis melanoloma]
          Length = 422

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVTSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|290745855|gb|ADD51597.1| ATP synthase beta chain [Lellingeria limula]
          Length = 391

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 43  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLCIFETGIKVVDLLAPYRR 100

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 101 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 159

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 160 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 219

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 220 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 277

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 278 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 336

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 337 LQDIIAILG 345


>gi|189314193|gb|ACD88996.1| ATP synthase beta subunit [Stephania venosa]
          Length = 384

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 141/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 204

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 205 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 264

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 265 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 322

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 323 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359


>gi|149798649|gb|ABR32015.1| ATP synthase beta chain [Adiantum tenerum]
          Length = 385

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 26/312 (8%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  +   +  I    P     +     F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVQNSATFPIHRSAPAFTQLETKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 58  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQN 117

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVS 177

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 178 ALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 235

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQD 294

Query: 389 IRLIGGYRPGVD 400
           I  I    PG+D
Sbjct: 295 IIAI----PGLD 302


>gi|156739710|gb|ABU93508.1| ATP synthase beta subunit [Cyrtomium pachyphyllum]
          Length = 394

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 210 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQR 326

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 327 YKELQDIIAILG 338


>gi|149384765|gb|ABR25191.1| ATP synthase beta chain [Tectaria trifoliata]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|290745935|gb|ADD51634.1| ATP synthase beta chain [Terpsichore dilatata]
          Length = 411

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|290745902|gb|ADD51618.1| ATP synthase beta chain [Terpsichore aff. semihirsuta MAS-2010]
          Length = 411

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|171191281|gb|ACB45108.1| AtpB [Simaba trichilioides]
          Length = 283

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 33  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTRE 92

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 93  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 152

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 153 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 210

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 211 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 258


>gi|290745943|gb|ADD51638.1| ATP synthase beta chain [Terpsichore sp. MAS-2010d]
          Length = 411

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|315020451|gb|ADT70793.1| AtpB [Lellingeria sp. MAS-2010]
          Length = 379

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVQSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      + LL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDALLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|149384853|gb|ABR25235.1| ATP synthase beta chain [Diplazium hachijoense]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  +   +  I    P           F+TGI+V+D   P
Sbjct: 37  TTLGRIFNALGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDPLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD    L+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTALSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|149384513|gb|ABR25079.1| ATP synthase beta chain [Dryopteris expansa]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSVTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|290745957|gb|ADD51644.1| ATP synthase beta chain [Terpsichore sp. Sundue 1167]
          Length = 411

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|290745815|gb|ADD51577.1| ATP synthase beta chain [Ceradenia kalbreyeri]
 gi|290745819|gb|ADD51579.1| ATP synthase beta chain [Ceradenia aff. kalbreyeri Vasco & Sundue
           701]
 gi|290745827|gb|ADD51583.1| ATP synthase beta chain [Ceradenia sp. MAS-2010]
 gi|290745829|gb|ADD51584.1| ATP synthase beta chain [Ceradenia sp. MAS-2010]
 gi|290745831|gb|ADD51585.1| ATP synthase beta chain [Ceradenia sp. Moran 7520]
          Length = 393

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 45  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 102

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 103 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 162

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 163 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 222

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 223 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 280

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 281 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 339

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 340 QDIIAILG 347


>gi|328681627|gb|AEB32886.1| ATP synthase beta subunit [Zoopsis setulosa]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|149384609|gb|ABR25127.1| ATP synthase beta chain [Polystichum munitum]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|122051519|gb|ABM65862.1| ATP synthase beta chain [Cochlidium serrulatum]
          Length = 413

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 65  LGRISNVLGEPVDNLGPVTSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 122

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 123 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 181

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 182 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 241

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 242 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 299

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 300 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 358

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 359 LQDIIAILG 367


>gi|99640436|emb|CAJ45077.1| putative beta subunit of chloroplast ATP synthase [Cibotium
           chamissoi]
 gi|99640441|emb|CAJ45078.1| putative beta subunit of chloroplast ATP synthase [Cibotium
           glaucum]
 gi|99640446|emb|CAJ45079.1| putative beta subunit of chloroplast ATP synthase [Cibotium
           nealiae]
          Length = 493

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 168/336 (50%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D   P   
Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDPSAPYRR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 163 GGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 341 FAHPDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 400 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431


>gi|328681671|gb|AEB32908.1| ATP synthase beta subunit [Lepidozia cupressina]
 gi|328681673|gb|AEB32909.1| ATP synthase beta subunit [Lepidozia ulothrix]
 gi|328681677|gb|AEB32911.1| ATP synthase beta subunit [Lepidozia bisbifida]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|290745833|gb|ADD51586.1| ATP synthase beta chain [Enterosora trifurcata]
          Length = 391

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 41  TTLGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 98

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+        
Sbjct: 99  RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 158

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 159 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 218

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 219 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 276

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 277 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 335

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 336 ELQDIIAILG 345


>gi|300813396|ref|ZP_07093747.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300512539|gb|EFK39688.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 464

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 162/315 (51%), Gaps = 12/315 (3%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+VI I+ D  +V I     G  ++   + F      +  S    GRV + LG PID   
Sbjct: 42  GRVIEIDEDKAMVQIFEGSSGINLTRTKVRFLGKPLELGVSPDMIGRVFDGLGNPIDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +          + + P ++R   E+  +TGI  ID    L  GQ++ +F+ +G+  + L
Sbjct: 102 KIIAKKKIDINGTPINP-VSRDYPEEFIQTGISSIDGLNTLVRGQKLPIFSLAGLPHNQL 160

Query: 178 LSMFAR-----SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
            +  AR     S     V+ + +G    E + FI+D      + +SV+ +  +D+  I R
Sbjct: 161 AAQIARQAKVLSGGNFAVVFTAMGITFEEAQYFIDDLTKTGAIDRSVLFMNLADDPAIER 220

Query: 232 KMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
              P  A+T AEY + + D +VL+++  +T +A ++RE++    E+P  RGYP  ++++L
Sbjct: 221 LATPKMALTCAEYLAFELDMHVLVLMTDMTNYAEALREVSAARKEVPGRRGYPGYLYTDL 280

Query: 291 PRLLERIGPSEKEKGNITAV-ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
             L ER G  +  KG+IT + I  + +GD  + PI D    I +G I+L++ L ++G  P
Sbjct: 281 AGLYERAGRIKGRKGSITQIPILTMPEGDITH-PIPDLTGYITEGQIILSQELYKQGLEP 339

Query: 350 PVDPLASVSRLADKA 364
           P++ + S+SRL DK 
Sbjct: 340 PINVIPSLSRLKDKG 354


>gi|149384811|gb|ABR25214.1| ATP synthase beta chain [Thelypteris poiteana]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESR 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|149384611|gb|ABR25128.1| ATP synthase beta chain [Polystichum setiferum]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|42558422|gb|AAS19920.1| ATP synthase beta chain [Terpsichore subscabra]
          Length = 422

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 74  LGRISNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 128

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 129 YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 188

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 189 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 248

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 249 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 306

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 307 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 365

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 366 KELQDIIAILG 376


>gi|42558362|gb|AAS19890.1| ATP synthase beta chain [Lellingeria apiculata]
          Length = 422

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 74  LGRISNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 128

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 129 YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 188

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 189 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 248

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 249 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 306

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 307 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 365

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 366 KELQDIIAILG 376


>gi|14718238|gb|AAK72857.1| ATP synthase beta subunit [Takhtajania perrieri]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 92  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 148

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208

Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V +     +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 209 VINEENIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 362


>gi|149384501|gb|ABR25073.1| ATP synthase beta chain [Ctenitis submarginalis]
          Length = 422

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|304413047|ref|ZP_07394520.1| membrane-bound ATP synthase, F1 complex, alpha subunit [Candidatus
           Regiella insecticola LSR1]
 gi|304283890|gb|EFL92283.1| membrane-bound ATP synthase, F1 complex, alpha subunit [Candidatus
           Regiella insecticola LSR1]
          Length = 513

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 158/335 (47%), Gaps = 24/335 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVIN LG+PIDG   +     S  + +  P  ++RQ V +  +TG + +D   P+  GQ
Sbjct: 105 GRVINTLGEPIDGKGPIENDGFSA-VEAIAPGVIDRQSVNESVQTGYKSVDAMVPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  +     K +   +G++   V   +   E++  D L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRHSDIKCVYVAIGQKASTVANVVRKLEEH--DALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G+N L++ D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVTAFTKGKVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGGAAQTQIIKKLSGGIRTALAQY- 400

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             R++     +   +D    K ++    + + LKQ
Sbjct: 401 --RELAAFSQFASDLDDTTRKQLNHGQKVTELLKQ 433


>gi|49182408|gb|AAT57683.1| ATP synthase beta chain [Ceratolejeunea coarina]
          Length = 369

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 141/267 (52%), Gaps = 23/267 (8%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 93

Query: 201 EVREFI----------EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
           E  +            E+ + D+  K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 94  EGNDLYMEMKESKVINEESISDS--KXALVYGQMNEPPGARMRVGLTALTMAEYFRDINK 151

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 152 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITS 209

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E
Sbjct: 210 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGE 268

Query: 370 K--KLVSSLTHLIHRFEETRDIRLIGG 394
           +  +    +   + R++E +DI  I G
Sbjct: 269 EHYETAQGVKQTLQRYKELQDIIAILG 295


>gi|42558316|gb|AAS19867.1| ATP synthase beta chain [Chrysogrammitis musgraveana]
          Length = 422

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V   +  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITFIQAVYVPAGDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|156739834|gb|ABU93570.1| ATP synthase beta subunit [Oleandra hainanensis]
          Length = 391

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 153/307 (49%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G
Sbjct: 36  LGRISNVLGEPVDNLGPVRSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 94

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           
Sbjct: 95  GKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 154

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 155 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 214

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 215 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 272

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 273 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 331

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 332 DIIAILG 338


>gi|149384861|gb|ABR25239.1| ATP synthase beta chain [Diplazium virescens]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  +   +  I    P           F+TGI+V+D   P
Sbjct: 37  TTLGRIFNALGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDPLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD    L+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTALSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|322718699|gb|ADX07362.1| ATP synthase beta chain [Leucotrichum mortonii]
          Length = 419

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG     ++  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRIFNVLGEPVD---NLGPVRSTAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|169260981|gb|ACA52092.1| ATP synthase beta subunit [Ceratopteris richardii]
          Length = 290

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +      I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVQNSTKFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283


>gi|290745939|gb|ADD51636.1| ATP synthase beta chain [Terpsichore leucosticta]
          Length = 395

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|149384741|gb|ABR25179.1| ATP synthase beta chain [Thylacopteris papillosa]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVRSSTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|149384855|gb|ABR25236.1| ATP synthase beta chain [Diplazium legalloi]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNALGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VTNEQNISESKVAPVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD      R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTAPPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|282882163|ref|ZP_06290802.1| V-type sodium ATPase, B subunit [Peptoniphilus lacrimalis 315-B]
 gi|281297928|gb|EFA90385.1| V-type sodium ATPase, B subunit [Peptoniphilus lacrimalis 315-B]
          Length = 464

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 162/315 (51%), Gaps = 12/315 (3%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+VI I+ D  +V I     G  ++   + F      +  S    GRV + LG PID   
Sbjct: 42  GRVIEIDEDKAMVQIFEGSSGINLTRTKVRFLGKPLELGVSPDMIGRVFDGLGNPIDNGP 101

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +          + + P ++R   E+  +TGI  ID    L  GQ++ +F+ +G+  + L
Sbjct: 102 KIIAKKKIDINGTPINP-VSRDYPEEFIQTGISSIDGLNTLVRGQKLPIFSLAGLPHNQL 160

Query: 178 LSMFAR-----SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
            +  AR     S     V+ + +G    E + FI+D      + +SV+ +  +D+  I R
Sbjct: 161 AAQIARQAKVLSGGNFAVVFTAMGITFEEAQYFIDDLTKTGAIDRSVLFMNLADDPAIER 220

Query: 232 KMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
              P  A+T AEY + + D +VL+++  +T +A ++RE++    E+P  RGYP  ++++L
Sbjct: 221 LATPKMALTCAEYLAFELDMHVLVLMTDMTNYAEALREVSAARKEVPGRRGYPGYLYTDL 280

Query: 291 PRLLERIGPSEKEKGNITAV-ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
             L ER G  +  KG+IT + I  + +GD  + PI D    I +G I+L++ L ++G  P
Sbjct: 281 AGLYERAGRIKGRKGSITQIPILTMPEGDITH-PIPDLTGYITEGQIILSQELYKQGLEP 339

Query: 350 PVDPLASVSRLADKA 364
           P++ + S+SRL DK 
Sbjct: 340 PINVIPSLSRLKDKG 354


>gi|258508176|ref|YP_003170927.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus GG]
 gi|257148103|emb|CAR87076.1| ATP synthase A chain [Lactobacillus rhamnosus GG]
 gi|259649494|dbj|BAI41656.1| F0F1-type ATP synthase subunit alpha [Lactobacillus rhamnosus GG]
          Length = 509

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 157/337 (46%), Gaps = 17/337 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I  +G  +EI  GD V   GR    P      GRV+N+LG+P+DG  +
Sbjct: 61  GMALNLETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGEAMIGRVVNSLGQPVDGLGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+++ 
Sbjct: 121 I-KTDKTRPIEFKAPGVMQRQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSDESPIL 230
             ++  + D     +   +G++   VR  +E      LKK      ++V+ A   E   +
Sbjct: 180 IDTILNQKDQNMICVYVAIGQKDSTVRAQVE-----TLKKYGAMDYTIVLTAGPSEPAPM 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + E F   G +VL++ D +++ A S RE++      P    YP  +F   
Sbjct: 235 LYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 295 SRLLERAAKLSDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P +D  ASVSR+   A     KK+  +L   +  F E
Sbjct: 355 PAIDAGASVSRVGGDAQVKAMKKVAGTLRLDLASFRE 391


>gi|149384561|gb|ABR25103.1| ATP synthase beta chain [Elaphoglossum moorei]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 159/310 (51%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG   +++   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRNIATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|312285193|gb|ADQ64338.1| ATP synthase beta subunit [Arcangelisia gusanlung]
          Length = 469

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 141/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 352


>gi|328681623|gb|AEB32884.1| ATP synthase beta subunit [Hyalolepidozia microphylla]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|171191277|gb|ACB45106.1| AtpB [Simaba morettii]
          Length = 283

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 34  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTRE 93

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 94  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 153

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 154 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 211

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 212 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 259


>gi|290745835|gb|ADD51587.1| ATP synthase beta chain [Enterosora trifurcata]
          Length = 390

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 40  TTLGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 97

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+        
Sbjct: 98  RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 157

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 158 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 217

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 218 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 275

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 276 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 334

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 335 ELQDIIAILG 344


>gi|328681705|gb|AEB32925.1| ATP synthase beta subunit [Bazzania tricrenata]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|322718697|gb|ADX07361.1| ATP synthase beta chain [Terpsichore aff. cultrata Sundue 1162]
          Length = 409

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 21  LGRISNVLGEPVD---NLGPVQSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 77

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 78  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 137

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 138 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 197

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 198 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 255

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 256 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 314

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 315 LQDIIAILG 323


>gi|290745932|gb|ADD51633.1| ATP synthase beta chain [Terpsichore cultrata]
          Length = 421

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 73  LGRISNVLGEPVD---NLGPVQSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 129

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 130 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 189

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 190 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 249

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 250 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 307

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 308 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 366

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 367 LQDIIAILG 375


>gi|282898191|ref|ZP_06306182.1| ATP synthase F1, alpha subunit [Raphidiopsis brookii D9]
 gi|281196722|gb|EFA71627.1| ATP synthase F1, alpha subunit [Raphidiopsis brookii D9]
          Length = 506

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 173/384 (45%), Gaps = 21/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G  I  G  V    +  ++       GR
Sbjct: 60  GTVGIAQNLEEDNVGAVL-----------MGEGRNIQEGSTVTATAKIAQVGVGEALIGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG+ IDG   + K   S  I S  P  + R+ V +  +TGI  ID   P+  GQR 
Sbjct: 109 VVDALGRAIDGKGEI-KATTSRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRE 167

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+++ +         D V + + VG++   V   ++       L+ +VVV 
Sbjct: 168 LIIGDRQTGKTSIAIDTIINQKGEDVVCVYVAVGQKASTVANVVQTLQEKGALEYTVVVA 227

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + +   L+ +AP T  TIAEYF  +G   L+I D +++ A + R+++      P    
Sbjct: 228 ANASDPATLQFLAPYTGATIAEYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREA 287

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG I L+
Sbjct: 288 YPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLS 347

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P V+P  SVSR+   A +   KK+   +   + +F+   D++    +   +
Sbjct: 348 SDLFNSGVRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFD---DLQAFSQFASDL 404

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423
           D      + +   + + LKQ  +D
Sbjct: 405 DKATQDQLARGQRLRELLKQPQND 428


>gi|189314227|gb|ACD89013.1| ATP synthase beta subunit [Arcangelisia flava]
          Length = 384

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 141/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 89  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 204

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 205 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 264

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 265 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 322

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 323 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359


>gi|46360700|gb|AAS89131.1| ATP synthase beta subunit [Noteroclada confluens]
          Length = 379

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 153/308 (49%), Gaps = 24/308 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D    LG  D      + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 1   RIFNVLGEPVD---DLGPVDAGATFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 57

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214
            +IG F G+G+GK+     L++  A++     V   +  ER RE  +   +     +   
Sbjct: 58  GKIGSFGGAGVGKTVPIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINE 116

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 117 QNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 176

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 177 VSALLGRMPSAVGYQPTLSTEMGTSQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 234

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 235 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 293

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 294 QDIIAILG 301


>gi|328681617|gb|AEB32881.1| ATP synthase beta subunit [Kurzia calcarata]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|328681645|gb|AEB32895.1| ATP synthase beta subunit [Telaranea heterotexta]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEENISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|294155392|ref|YP_003559776.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145]
 gi|291599954|gb|ADE19450.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145]
          Length = 461

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 181/363 (49%), Gaps = 23/363 (6%)

Query: 69  IVY-ICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLG-KGDLS 125
           +VY + P+ I EE      V+  G+  + P      G V +  GK ID   SL  K  + 
Sbjct: 53  VVYNVAPIKINEE------VYDTGKTFMVPIGNEAKGHVYDFSGKVID---SLPVKEQIR 103

Query: 126 MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA-- 182
              M+   P  N  +V +   +TGI+VID F P+  G ++G+F G+G+GK+ L+      
Sbjct: 104 YVEMNTTIPKQNIVKVNQEILETGIKVIDFFIPIFKGYKLGIFGGAGVGKTVLMKEIIFN 163

Query: 183 --RSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
             + +  D  I    GER RE  E  E+ +   L   S++ ++  +ESP  R       +
Sbjct: 164 TLKQNNTDSSIFIGSGERSREGIELYEELINSKLMNNSMMFISKMNESPGARMNIVPIGI 223

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T AEY    + +NVLL +D+I R+  +  E + + G+ P   GY +++ S++  + +R+ 
Sbjct: 224 TSAEYLRDIQRENVLLFIDNIYRYIQAGNEASASLGKKPSIGGYQSTLDSDVATIEDRLF 283

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  E G+IT+  +V +  D+ +DP A ++ + LD  +VL+R L  +  +P +DP++S S
Sbjct: 284 AN--ENGSITSFQTVFLPMDDISDPSAVAIFNHLDATLVLSRELTSKNIFPAIDPISSSS 341

Query: 359 R-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L +K         +     ++ ++EE  D+  I G    +D    + VH+   + +F 
Sbjct: 342 NTLDEKVLGKAHYDAIIETKKILKKYEELEDVISIFGVD-DLDEENKEIVHKALQLQNFF 400

Query: 418 KQS 420
            Q+
Sbjct: 401 TQN 403


>gi|303234544|ref|ZP_07321181.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           BVS033A4]
 gi|302494378|gb|EFL54147.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           BVS033A4]
          Length = 588

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 12/261 (4%)

Query: 131 KVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++P P+  R  V++  +TG R++D+F PL  G  + +  G G GK+      A+    D 
Sbjct: 195 RIPRPSKERLDVDRLLETGQRILDVFFPLAKGGTVAIPGGFGTGKTMTQHQLAKYADADI 254

Query: 190 VIISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPL-TAVTI 241
           +I    GERG E+ E +ED+        G  L +  V++A +   P+  + A + T +T+
Sbjct: 255 IIYIGCGERGNEMTEVLEDFPKLIDPNNGKPLMERTVLIANTSNMPVAAREASIYTGITM 314

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--- 298
           AEYF   G +V ++ DS +R+A ++REI+    E+P   GYP  + S + +  ER G   
Sbjct: 315 AEYFRDMGYDVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAQFYERAGIVK 374

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++T + +V   G + ++P+ ++ +  ++  + L++ LA    YP ++ ++S S
Sbjct: 375 TLNDNEGSVTIIGAVSPAGGDFSEPVTENTKRFVNVFLGLDKDLAYSRHYPAINWMSSYS 434

Query: 359 RLADKAWSADEKKLVSSLTHL 379
              DK     E KL   +  L
Sbjct: 435 SYVDKLRDYYESKLGEDVVDL 455


>gi|224372371|ref|YP_002606743.1| F0F1 ATP synthase subunit alpha [Nautilia profundicola AmH]
 gi|223589493|gb|ACM93229.1| ATP synthase F1, alpha subunit [Nautilia profundicola AmH]
          Length = 499

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 11/334 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G V  +  D V +  +G G +I+ G  V   G+    P      GRV+NALG+PIDG   
Sbjct: 58  GLVFNLEADNVGVVVLGKGTDITEGSSVKRLGKLISVPVGEALIGRVVNALGEPIDGKGP 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           +   +    +  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+ 
Sbjct: 118 IEATEYRY-VEEKAPGIMARKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTVA 176

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
           L         D + I + VG++   V   +   E++    +  ++VV A++ E+  L+ +
Sbjct: 177 LDTILNQKNEDVICIYVAVGQKQSTVANIVRILEEH--GAMDYTIVVNASASEAASLKFL 234

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP   VT+ EYF   G + L++ D +++ A + RE++      P    YP  VF    RL
Sbjct: 235 APYAGVTMGEYFRDNGRHALIVYDDLSKHADAYREMSLLLRRPPGREAYPGDVFYLHSRL 294

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  +   G +    I  +V SI DG I L  +L  +G  P +
Sbjct: 295 LERAAKLNDELGAGSLTALPIIETKGGDVAAYIPTNVISITDGQIFLETNLFNKGIRPAI 354

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++  +L   + +F E
Sbjct: 355 NVGLSVSRVGGAAQIKAMKQVAGNLRLDLAQFRE 388


>gi|57238812|ref|YP_179948.1| F0F1 ATP synthase subunit alpha [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578741|ref|YP_196953.1| F0F1 ATP synthase subunit alpha [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58616801|ref|YP_196000.1| F0F1 ATP synthase subunit alpha [Ehrlichia ruminantium str. Gardel]
 gi|75356560|sp|Q5FF66|ATPA_EHRRG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81557361|sp|Q5HC95|ATPA_EHRRW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|57160891|emb|CAH57796.1| ATP synthase alpha chain [Ehrlichia ruminantium str. Welgevonden]
 gi|58416413|emb|CAI27526.1| ATP synthase alpha chain [Ehrlichia ruminantium str. Gardel]
 gi|58417367|emb|CAI26571.1| ATP synthase alpha chain [Ehrlichia ruminantium str. Welgevonden]
          Length = 507

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 168/350 (48%), Gaps = 17/350 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           +G V+ ++ D V I   G    +  GD+V    +    P      GRV++ALG PIDG +
Sbjct: 59  IGVVLNLDCDTVSIVIFGSENSVGEGDIVKCTNQLMDVPVGLELLGRVVDALGNPIDGLE 118

Query: 118 SL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           +   K  L +EI  K P  ++RQ V +  +TGI+VID+  P+  GQR  +      GK+ 
Sbjct: 119 NFDTKTRLPVEI--KAPGIIDRQSVTEPLQTGIKVIDMLIPIGRGQRELIIGDRKTGKTA 176

Query: 176 ----TLLSMFARS-DCFDK----VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
               T+++  + + +  DK     I   +G++   V   I        L+ ++VVVA + 
Sbjct: 177 IAIDTIINQKSHNNEVIDKEKVYCIYVAIGQKNSSVARIINKLRESGALEYTIVVVAGAS 236

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +S  L+ +AP TA  + E+F   G + L++ D +++ A + R+++      P    YP  
Sbjct: 237 DSASLQYLAPYTACAMGEFFRDNGMHCLIVYDDLSKHAAAYRQMSLLLRRPPGREAYPGD 296

Query: 286 VFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +K  G++TA+  +     + +  +  +V SI DG I L   + 
Sbjct: 297 VFFLHSRLLERAAKMSDKKGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESEIF 356

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            +G  P V+   SVSR+   A     KK+  S+   + ++ E  D    G
Sbjct: 357 YKGLRPAVNVGLSVSRVGSSAQIKSVKKVAGSIKLSLAQYRELEDFAKFG 406


>gi|34763444|ref|ZP_00144391.1| ATP synthase alpha chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742366|ref|ZP_04572847.1| ATP synthase subunit alpha [Fusobacterium sp. 4_1_13]
 gi|256845694|ref|ZP_05551152.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_36A2]
 gi|294785059|ref|ZP_06750347.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_27]
 gi|27886885|gb|EAA24010.1| ATP synthase alpha chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229430014|gb|EEO40226.1| ATP synthase subunit alpha [Fusobacterium sp. 4_1_13]
 gi|256719253|gb|EEU32808.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_36A2]
 gi|294486773|gb|EFG34135.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_27]
          Length = 500

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVINALG PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGENLLGRVINALGDPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-HADKYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V + I   L D   +  +++V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQDVKCIYVAIGQKRSTVAQ-IYKKLSDLGCMDYTIIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASRVKLELAQYTE 391


>gi|302390261|ref|YP_003826082.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermosediminibacter oceani DSM 16646]
 gi|302200889|gb|ADL08459.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermosediminibacter oceani DSM 16646]
          Length = 587

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 11/236 (4%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P   R  + K   TG RVID F PL  G    +  G G GK+      A+    D ++  
Sbjct: 198 PVAKRMPIGKLLVTGQRVIDTFFPLAKGGTAAIPGGFGTGKTITQHQLAKWSDADIIVYI 257

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ E +ED+        G  L    V++A +   P+  + A + T +TIAEYF
Sbjct: 258 GCGERGNEMTEVLEDFPKLQDPRTGKPLMDRTVLIANTSNMPVAAREASIYTGITIAEYF 317

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302
              G NV L+ DS +R+A ++REIA    E+P   GYP  + S L +  ER G  +    
Sbjct: 318 RDMGYNVALMADSTSRWAEALREIAGRLEEMPAEEGYPAYLASRLAQFYERAGYFKNLNG 377

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +G+IT + +V   G + ++P+  + + ++   + L++ LA    +P ++ L S S
Sbjct: 378 SEGSITIIGAVSPAGGDFSEPVTQATKRVVGAFLALDKELAYARHFPSINWLLSYS 433


>gi|122051523|gb|ABM65864.1| ATP synthase beta chain [Grammitis congener]
          Length = 410

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 62  LGRIFNVLGEPVDNLGPVQSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 119

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 120 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 179

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 180 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 239

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++     +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 240 VSALLDRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 297

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 298 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 356

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 357 QDIIAILG 364


>gi|49182430|gb|AAT57694.1| ATP synthase beta chain [Marsupidium latifolium]
          Length = 372

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 22/304 (7%)

Query: 107 NALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRI 164
           + LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +I
Sbjct: 1   HVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKI 57

Query: 165 GVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGD--NLK 215
           G+F G+G+GK+ L+     +         +   VGER RE      E  E  + D  N+ 
Sbjct: 58  GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEQNIS 117

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 118 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSAL 177

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 178 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 235

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIR 390
           D   VL+R LA +  YP VDPL S S +  + W   E+  ++   +   + R++E +DI 
Sbjct: 236 DATTVLSRGLAAKVFYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRYKELQDII 294

Query: 391 LIGG 394
            I G
Sbjct: 295 AILG 298


>gi|328681595|gb|AEB32870.1| ATP synthase beta subunit [Telaranea trilobata]
 gi|328681601|gb|AEB32873.1| ATP synthase beta subunit [Hygrolembidium rigidum]
 gi|328681603|gb|AEB32874.1| ATP synthase beta subunit [Hygrolembidium rigidum]
 gi|328681605|gb|AEB32875.1| ATP synthase beta subunit [Lembidium nutans]
 gi|328681609|gb|AEB32877.1| ATP synthase beta subunit [Megalembidium insulanum]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|290745837|gb|ADD51588.1| ATP synthase beta chain [Enterosora enterosoroides]
          Length = 392

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158
              GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P 
Sbjct: 42  TTLGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 99

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+        
Sbjct: 100 RRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 159

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 160 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 219

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 220 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 277

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 278 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 336

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 337 ELQDIIAILG 346


>gi|113910958|gb|ABI48211.1| ATPase beta subunit [Cedrus deodara]
          Length = 440

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + +  PA  +   +   F+TGI+V+D+  
Sbjct: 66  GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 122

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 123 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 182

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+ +AEYF    + +VLL +D+I RF  
Sbjct: 183 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALXMAEYFRDVNEQDVLLFIDNIFRFVQ 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP 
Sbjct: 243 TGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 300

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
                +  D   +L R LA +G YP VDPL S   +  + W   E+  +    +  ++ R
Sbjct: 301 PAMTFAHSDATTILLRGLATKGIYPAVDPLDSTLTML-QPWIVGEEHYETAQRVKQMLQR 359

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 360 YKELQDIIAILG 371


>gi|157272373|gb|ABV27013.1| ATP synthase beta chain [Azolla pinnata]
          Length = 381

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +NL +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LPFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEK 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   A+  
Sbjct: 213 VYVPADDSTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAILG 295


>gi|42558364|gb|AAS19891.1| ATP synthase beta chain [Lellingeria hirsuta]
          Length = 422

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      + LL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDALLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|328681679|gb|AEB32912.1| ATP synthase beta subunit [Lepidozia sp. 1 von Konrat 6/20-4]
          Length = 380

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|323388511|gb|ADX60541.1| ATP synthase beta subunit [Dodonaea viscosa]
          Length = 329

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 141/264 (53%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 22  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 81

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 82  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 141

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 142 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 199

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 200 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 258

Query: 373 VSS--LTHLIHRFEETRDIRLIGG 394
            ++  +   + R++E +DI  I G
Sbjct: 259 ETAQRVKQTLQRYKELQDIIAILG 282


>gi|290745937|gb|ADD51635.1| ATP synthase beta chain [Terpsichore lanigera]
          Length = 421

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 73  LGRISNVLGEPVD---NLGPVQSSXIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 129

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 130 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 189

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 190 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 249

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 250 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 307

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 308 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 366

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 367 LQDIIAILG 375


>gi|169261013|gb|ACA52106.1| ATP synthase beta subunit [Vittaria volkensii]
          Length = 285

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTN 118

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 179 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 278


>gi|158602251|gb|ABW74592.1| ATP synthase beta subunit [Anemone occidentalis]
          Length = 473

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+    +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 79  GATLGRIFNVLGEPVX---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 135

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +I +F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 136 PYRRGGKIALFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 196 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRY 373

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 374 KELQDIIAILG 384


>gi|325989794|ref|YP_004249493.1| ATP synthase subunit alpha [Mycoplasma suis KI3806]
 gi|323574879|emb|CBZ40539.1| ATP synthase subunit alpha [Mycoplasma suis]
          Length = 517

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 10/291 (3%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+IN  G+P+DG    GK D+S   ++ +  P  M R  V +   TGI  ID   P+ 
Sbjct: 106 SGRIINVFGEPLDGK---GKIDISEWSQVEAPAPEVMERSSVCEPLYTGILAIDAIIPIG 162

Query: 160 HGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216
            GQR  +      GK++L   ++  +     + +   +G++   V +  +D      L  
Sbjct: 163 KGQRELIIGDRQTGKTSLAMEAIVNQKGKNVRCVFVTIGQKNSTVFQSFKDLEKVGALDY 222

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           + +VVA++ + P L+ +AP   +T+AEY+  +G++VL+I D +T+ A + R ++      
Sbjct: 223 TTIVVASASDLPSLQFLAPFVGITVAEYWMRRGEDVLIIYDDLTQHAIAYRTLSLLLSFP 282

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    +P  +F    RLLER G    E   G+ITA+  +    D+ +  I  +V SI DG
Sbjct: 283 PGREAFPGDIFYLHSRLLERAGKLSPENGGGSITALPIIQTQSDDISAYIPSNVISITDG 342

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            + L  +L   G+ P VD   SVSR+   A  A  K L  SL   + ++ E
Sbjct: 343 QLFLKTTLFNSGQRPAVDLSNSVSRVGASAQEAAIKSLTGSLKLAVSQYFE 393


>gi|167770873|ref|ZP_02442926.1| hypothetical protein ANACOL_02226 [Anaerotruncus colihominis DSM
           17241]
 gi|167666913|gb|EDS11043.1| hypothetical protein ANACOL_02226 [Anaerotruncus colihominis DSM
           17241]
          Length = 465

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 151/303 (49%), Gaps = 30/303 (9%)

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKV 132
           G+  E +   L+ H     +SP     GR  +  G+PIDG   L      D++   M+ V
Sbjct: 61  GMSLENTKTTLLGHPMEMPLSPEVL--GRTFSGSGRPIDGLGELFCEQSADINGMPMNPV 118

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--------S 184
                R  +     TGI  ID    L  GQ++ +F+GSG+  + L     R        +
Sbjct: 119 ERVYPRNYI----NTGISSIDGLATLIRGQKLPIFSGSGMNHNKLAVQMVRQARLSGPGA 174

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDNLKKS------VVVVATSDESPILRKMAPLTA 238
           D F  ++ + +G     V+  I DY   + + S      V+ +  S++  I R + P  A
Sbjct: 175 DNF-VIVFAAMG-----VKNDIADYFRRSFEDSGVMDRVVMFLNLSNDPIIERILTPRCA 228

Query: 239 VTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEY +  +G +VL+I+  IT +  ++RE +++ GE+P  +G+P  ++S+L  L ER 
Sbjct: 229 LTVAEYLAFERGMHVLVIMTDITAYCEALREFSSSKGEIPGRKGFPGYLYSDLASLYERA 288

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E   G++T V  + +  D+   P+ D    I +G IVL+R L + G YPPV  L S+
Sbjct: 289 GIIEGSGGSVTQVPILTMPNDDITHPVPDLTGYITEGQIVLDRQLDQTGVYPPVSVLPSL 348

Query: 358 SRL 360
           SRL
Sbjct: 349 SRL 351


>gi|307262137|ref|ZP_07543788.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306868114|gb|EFM99939.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 513

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGAVKSQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|290745941|gb|ADD51637.1| ATP synthase beta chain [Terpsichore leucosticta]
          Length = 407

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 155/303 (51%), Gaps = 20/303 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDI 389
           +DI
Sbjct: 368 QDI 370


>gi|42558304|gb|AAS19861.1| ATP synthase beta chain [Calymmodon luerssenianus]
          Length = 422

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|322718691|gb|ADX07358.1| ATP synthase beta chain [Terpsichore senilis]
          Length = 414

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRISNVLGEPVD---NLGPVQSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|156739712|gb|ABU93509.1| ATP synthase beta subunit [Cyrtomium urophyllum]
          Length = 394

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|156739708|gb|ABU93507.1| ATP synthase beta subunit [Cyrtomium nephrolepioides]
          Length = 394

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +    N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 210 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQR 326

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 327 YKELQDIIAILG 338


>gi|49182420|gb|AAT57689.1| ATP synthase beta chain [Herbertus sakurai]
 gi|328681577|gb|AEB32861.1| ATP synthase beta subunit [Herbertus sakurai]
          Length = 369

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G      RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVXERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|290759650|gb|ADD54452.1| ATP sythase beta chain [Terpsichore sp. MAS-2010c]
          Length = 370

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 35  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 92

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 93  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 152

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 153 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 212

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 213 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 270

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 271 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 329

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 330 QDIIAILG 337


>gi|190571573|ref|YP_001975931.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018975|ref|ZP_03334782.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|226739955|sp|B3CN53|ATPA_WOLPP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190357845|emb|CAQ55301.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995084|gb|EEB55725.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 513

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 178/374 (47%), Gaps = 18/374 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G V+ ++ D   I  +G   ++  GD+V   G     P      GRV+NALG PID D  
Sbjct: 63  GIVLDLDHDTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGDPID-DGG 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +    M I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+ 
Sbjct: 122 EIRAKNKMYIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIA 181

Query: 179 --SMFARSDCFDKV--------IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             ++  +    D+V        +   +G++   V + +        L+ + VVVA++ + 
Sbjct: 182 IDTIINQKKINDEVNENQKIYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDC 241

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +AP T  TI E+F   G + L++ D +++ A + R+++      P    YP  +F
Sbjct: 242 APMQFLAPYTGCTIGEFFRDNGMHCLVVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIF 301

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      EK +G++TA+  +     + +  +  +V SI DG I L   L  +
Sbjct: 302 YVHSRLLERAAKMSDEKGQGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESELFHK 361

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P V+   SVSR+   A     KK+  S+   + ++ E  D    G     +D  +  
Sbjct: 362 GFRPAVNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFAKFGS---DLDATVQL 418

Query: 406 AVHQVPIIYDFLKQ 419
           ++++   + + LKQ
Sbjct: 419 SLNKGKYLIELLKQ 432


>gi|157272375|gb|ABV27014.1| ATP synthase beta chain [Azolla microphylla]
          Length = 382

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 22/302 (7%)

Query: 109 LGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   ++G  + S++  + +  PA  +   +   F+TGI+V+D+  P   G +IG+
Sbjct: 1   LGEPVD---NMGPVESSIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 57

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S
Sbjct: 58  FGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEENISES 117

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++  SG
Sbjct: 118 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSALSG 177

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 178 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHLDA 235

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRDIRLI 392
             VL+R  A +G YP VDPL S S +  + W   A+  +    +   + R++E +DI  I
Sbjct: 236 TTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKELQDIIAI 294

Query: 393 GG 394
            G
Sbjct: 295 LG 296


>gi|149384833|gb|ABR25225.1| ATP synthase beta chain [Athyrium yokoscense]
          Length = 426

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +G  +  I    P           F+TGI+V D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQGSTTFPIHRSAPAFTQLDTKLSIFETGIKVADLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L++      A++     V   +  ER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T AEYF      +VLL +D+I RF  
Sbjct: 153 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTTAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S    + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTTL-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|149384759|gb|ABR25188.1| ATP synthase beta chain [Tectaria fimbriata]
          Length = 426

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+  ++      A++     V   +  ER RE     RE  E  
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVG-ERTREGNDLYREMKESK 152

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +   +N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEENISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 271 PATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|149384539|gb|ABR25092.1| ATP synthase beta chain [Elaphoglossum deltoideum]
          Length = 415

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 28  LGRIFNVLGEPVD---NLGPVRNSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 84

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 85  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 143

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 144 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 203

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 204 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 261

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   A+       +   + R++
Sbjct: 262 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 320

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 321 ELQDIIAILG 330


>gi|122051541|gb|ABM65873.1| ATP synthase beta chain [Grammitis reinwardtioides]
          Length = 406

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 58  LGRIFNVLGEPVDNLGPVQSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 115

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 116 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 175

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 176 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGLE 235

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 236 VSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 293

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 294 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 352

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 353 QDIIAILG 360


>gi|310947782|gb|ADP50710.1| ATP synthase beta chain [Adiantum diaphanum]
          Length = 370

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 155/308 (50%), Gaps = 26/308 (8%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 59  FGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 295

Query: 393 GGYRPGVD 400
               PG+D
Sbjct: 296 ----PGLD 299


>gi|42558404|gb|AAS19911.1| ATP synthase beta chain [Terpsichore cultrata]
 gi|42558410|gb|AAS19914.1| ATP synthase beta chain [Terpsichore lanigera]
          Length = 422

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVQSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|99640431|emb|CAJ45076.1| putative beta subunit of chloroplast ATP synthase [Cibotium
           barometz]
          Length = 395

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 168/336 (50%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D   P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDPSAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 243 FAHPDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 302 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 333


>gi|122051539|gb|ABM65872.1| ATP synthase beta chain [Grammitis padangensis]
          Length = 415

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 67  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 124

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 125 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 184

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 185 QNISESKVASVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 244

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++     +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 245 VSALLDRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 302

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 303 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 361

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 362 QDIIAILG 369


>gi|303249891|ref|ZP_07336093.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307250943|ref|ZP_07532869.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307253315|ref|ZP_07535187.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650954|gb|EFL81108.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306856971|gb|EFM89101.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306859179|gb|EFM91220.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 513

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGEIDNNGFSPVEVIA--PGVIDRQSVDQPVQTGYKAVDSMVPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|7708489|emb|CAB89938.1| ATP synthase beta subunit [Medusagyne oppositifolia]
          Length = 449

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 16/304 (5%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+PI GD        +  I    P  +        F+TGI+V+D+  P   G +
Sbjct: 60  RIFNVLGEPI-GDMGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLSAPYRRGGK 118

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNL 214
           IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+
Sbjct: 119 IGLFGGAGVGKTVLIMELINNIEKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENI 178

Query: 215 KKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
            +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++ 
Sbjct: 179 AESKVALVYGQMNEPPGARMRVGLTALTLAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSA 238

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 239 LLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAH 296

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390
           LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI 
Sbjct: 297 LDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDII 356

Query: 391 LIGG 394
            I G
Sbjct: 357 AILG 360


>gi|322718687|gb|ADX07356.1| ATP synthase beta chain [Terpsichore glandulifera]
 gi|322718693|gb|ADX07359.1| ATP synthase beta chain [Terpsichore aff. cultrata Sundue 1136]
 gi|322718695|gb|ADX07360.1| ATP synthase beta chain [Terpsichore cultrata]
          Length = 419

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 31  LGRISNVLGEPVD---NLGPVQSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|157272359|gb|ABV27006.1| ATP synthase beta chain [Azolla pinnata]
          Length = 380

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 34  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTRE 93

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +NL +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 94  GNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 153

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 154 LPFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 211

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEK 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   A+  
Sbjct: 212 VYVPADDSTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHY 270

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 271 ETAQGVKQTLQRYKELQDIIAILG 294


>gi|156739684|gb|ABU93495.1| ATP synthase beta subunit [Polystichum atkinsonii]
          Length = 394

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|42558420|gb|AAS19919.1| ATP synthase beta chain [Terpsichore senilis]
          Length = 422

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVQSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 131 RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 190

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|156739686|gb|ABU93496.1| ATP synthase beta subunit [Polystichum capillipes]
          Length = 394

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALPGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R++E
Sbjct: 271 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|315020462|gb|ADT70799.1| AtpB [Ctenopteris subimpressa]
          Length = 379

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRIFNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      + LL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDALLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|122051535|gb|ABM65870.1| ATP synthase beta chain [Grammitis knutsfordiana]
          Length = 414

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 66  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 123

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 124 GGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 183

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 184 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 243

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++     +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 244 VSALLDRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 301

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 302 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 360

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 361 QDIIAILG 368


>gi|42558398|gb|AAS19908.1| ATP synthase beta chain [Terpsichore achilleifolia]
          Length = 422

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRTSTISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|42558384|gb|AAS19901.1| ATP synthase beta chain [Micropolypodium zurquinum]
          Length = 422

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPIRTSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 132 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 190

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 309 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 367

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 368 LQDIIAILG 376


>gi|29726132|gb|AAD00593.2| ATP synthase beta subunit [Glaucium flavum]
          Length = 475

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 152/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F TG  V+D+  P
Sbjct: 82  ATLGRIXNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFXTGXXVVDLLAP 138

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 139 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 198

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 199 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVXEQDVLLFIDNIFRFVQA 258

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 259 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 316

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+ 
Sbjct: 317 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRYX 376

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 377 ELQDIIAILG 386


>gi|156739822|gb|ABU93564.1| ATP synthase beta subunit [Lomagramma matthewii]
          Length = 394

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRIFNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 93  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 151

Query: 211 -GDNLKKSVVVVATS--DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V +A    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 152 NEQNIPESKVALAYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 211

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 212 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 269

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 270 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 328

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 329 ELQDIIAILG 338


>gi|149384615|gb|ABR25130.1| ATP synthase beta chain [Polystichum tripteron]
          Length = 426

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 165/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|49182414|gb|AAT57686.1| ATP synthase beta chain [Gackstroemia weindorferi]
          Length = 369

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 140/264 (53%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLXAPYRRGGKIGLFGGAGVGKTVLIMXLINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           ++   +   + R++E +DI  I G
Sbjct: 272 EIAQGVKQTLQRYKELQDIIAILG 295


>gi|42558390|gb|AAS19904.1| ATP synthase beta chain [Prosaptia obliquata]
          Length = 422

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|49182422|gb|AAT57690.1| ATP synthase beta chain [Hookeria lucens]
          Length = 369

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 153/295 (51%), Gaps = 21/295 (7%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S+   + +  PA  +   +   F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 5   DNLGPVDTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 64

Query: 175 STLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNLK----KSVVVVA 222
           + L+    +  A++     V   +  ER RE      E  E  + +  K    K  +V  
Sbjct: 65  TVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINEEKISESKVALVYG 123

Query: 223 TSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A G
Sbjct: 124 QMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVG 183

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R 
Sbjct: 184 YQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRG 241

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 242 LAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 295


>gi|328681703|gb|AEB32924.1| ATP synthase beta subunit [Bazzania affinis]
          Length = 380

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVASVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 SG 295


>gi|237739745|ref|ZP_04570226.1| ATP synthase subunit alpha [Fusobacterium sp. 2_1_31]
 gi|229423353|gb|EEO38400.1| ATP synthase subunit alpha [Fusobacterium sp. 2_1_31]
          Length = 500

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRV+NALG+PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGYASLIKEGDEVRATGKVVSVPAGDNLLGRVVNALGEPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-IADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V + I   L D   ++ + +V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQNVKCIYVAIGQKRSTVAQ-IYKKLSDLGCMEYTTIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLDLAQYTE 391


>gi|157272357|gb|ABV27005.1| ATP synthase beta chain [Azolla caroliniana]
 gi|157272363|gb|ABV27008.1| ATP synthase beta chain [Azolla mexicana]
 gi|157272367|gb|ABV27010.1| ATP synthase beta chain [Azolla mexicana]
 gi|157272371|gb|ABV27012.1| ATP synthase beta chain [Azolla filiculoides]
          Length = 383

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 22/302 (7%)

Query: 109 LGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   ++G  + S++  + +  PA  +   +   F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NMGPVESSIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEENISES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++  SG
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSALSG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRDIRLI 392
             VL+R  A +G YP VDPL S S +  + W   A+  +    +   + R++E +DI  I
Sbjct: 237 TTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKELQDIIAI 295

Query: 393 GG 394
            G
Sbjct: 296 LG 297


>gi|149384845|gb|ABR25231.1| ATP synthase beta chain [Diplazium bombonasae]
          Length = 426

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNALGEPVD---NLGPVQSNTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +V L +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLSIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|159227438|emb|CAJ80510.1| ATP synthase beta subunit [Nicandra physalodes]
          Length = 333

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 143/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +  +     F+TGI+V+D+  
Sbjct: 39  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 95

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 96  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 156 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 215

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+   P 
Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTVPA 273

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 274 PGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 309


>gi|156739706|gb|ABU93506.1| ATP synthase beta subunit [Cyrtomium macrophyllum]
          Length = 394

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|322379228|ref|ZP_08053619.1| ATP synthase F1, subunit alpha [Helicobacter suis HS1]
 gi|321148368|gb|EFX42877.1| ATP synthase F1, subunit alpha [Helicobacter suis HS1]
          Length = 503

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 170/364 (46%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +V   GR               ++       GRVIN LG+PIDG   +     
Sbjct: 68  EEGSVGVIVLGGGRNIKEGTSVKRTKQLMKVPVGDAVVGRVINTLGEPIDGRGPIEANAF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S  +  K P  M+R+ V +  +TGI+VID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SF-VEQKAPGIMDRKSVHEPLQTGIKVIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           + D     I   +G++   V + +   E+Y    ++ SVV+ A +  SP ++ +AP   V
Sbjct: 187 QKDQNVICIYVAIGQKESTVAQVVHKLEEY--GAMEYSVVINAPASASPAMQYLAPYAGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TI E+F  +G + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 TIGEHFRDQGRHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 SEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              +K  G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SV
Sbjct: 305 MSDKKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKGTKQVAGTLRLDLAQY---RELQAFAQFASDLDEASRKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ P
Sbjct: 422 KQPP 425


>gi|323715430|gb|ADY04783.1| ATP synthase beta subunit [Mastixia pentandra]
          Length = 472

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 20/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           R+ N L +P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G
Sbjct: 92  RIFNVLWEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 149 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQ 208

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 209 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 268

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 269 SALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 326

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 327 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQD 386

Query: 389 IRLIGG 394
           I  I G
Sbjct: 387 IIAILG 392


>gi|310947788|gb|ADP50713.1| ATP synthase beta chain [Adiantum hispidulum]
          Length = 370

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 155/308 (50%), Gaps = 26/308 (8%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 59  FGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 295

Query: 393 GGYRPGVD 400
               PG+D
Sbjct: 296 ----PGLD 299


>gi|310947776|gb|ADP50707.1| ATP synthase beta chain [Adiantum aethiopicum]
          Length = 370

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 155/308 (50%), Gaps = 26/308 (8%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 59  FGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 295

Query: 393 GGYRPGVD 400
               PG+D
Sbjct: 296 ----PGLD 299


>gi|156069301|gb|ABU44854.1| ATP synthase beta subunit [Polystichum tonkinense]
          Length = 394

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|156739716|gb|ABU93511.1| ATP synthase beta subunit [Cyrtogonellum fraxinellum]
          Length = 394

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|46360665|gb|AAS89114.1| ATP synthase beta subunit [Fossombronia foveolata]
          Length = 340

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 142/265 (53%), Gaps = 19/265 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 2   FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 60

Query: 201 E----VREFIEDYLGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E      E  E  + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +
Sbjct: 61  EGNDLYMEMKESKVIDEQNISQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQD 120

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ 
Sbjct: 121 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQ 178

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+ 
Sbjct: 179 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEH 237

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 238 YETAQGVKRTLQRYKELQDIIAILG 262


>gi|315020449|gb|ADT70792.1| AtpB [Terpsichore sp. MAS-2010e]
          Length = 367

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 19  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 76

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 77  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 136

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 137 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 196

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 197 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 254

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 255 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 313

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 314 QDIIAILG 321


>gi|20467353|gb|AAL27807.1| ATPase beta subunit [Bowenia serrulata]
          Length = 380

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 24/308 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 77  GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 133

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 192

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 193 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDVLLFIDNIFRFV 252

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +   +    G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP
Sbjct: 253 QAGSXVXALLGXMPSAVGYXPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDP 310

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP V+PL S S +  + W   E+  +    +   + 
Sbjct: 311 APATTFAHLDATTVLSRGLAAKGIYPAVNPLDSTSTML-QPWIVGEEHYETAQGVKPTLQ 369

Query: 382 RFEETRDI 389
           R++E +DI
Sbjct: 370 RYKELQDI 377


>gi|328681647|gb|AEB32896.1| ATP synthase beta subunit [Telaranea sp. 2 von Konrat 6/7-9]
          Length = 378

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 19/294 (6%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F G+G+GK
Sbjct: 3   DNLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSFGGAGVGK 62

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV--VVAT 223
           + L+     +       +S+ G  G   RE  + Y+          +N+ +S V  V   
Sbjct: 63  TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEENISESKVALVYGQ 122

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 123 MNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 182

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 183 QPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 240

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           A +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 241 AAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 293


>gi|290745823|gb|ADD51581.1| ATP synthase beta chain [Ceradenia fucoides]
          Length = 393

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 45  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 102

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 103 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 162

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 163 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 222

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 223 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 280

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 281 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 339

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 340 QDIIAILG 347


>gi|149384795|gb|ABR25206.1| ATP synthase beta chain [Thelypteris limbosperma]
          Length = 426

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKGF-KTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +    +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 214 GSEVSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|37720977|gb|AAN32491.1| ATP synthase beta subunit [Alania endlicheri]
          Length = 497

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+ +  P 
Sbjct: 104 GATLGRIFNVLGEPVDNLGPVXTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVXLLAPY 162

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 223 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|42558430|gb|AAS19924.1| ATP synthase beta chain [Campyloneurum angustifolium]
          Length = 413

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 166/336 (49%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 75  GRIFNVLGEPVD---NLGPVRSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   +  ++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQCYKEL 368

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 369 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 400


>gi|156739690|gb|ABU93498.1| ATP synthase beta subunit [Polystichum duthiei]
          Length = 394

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALPGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|153815531|ref|ZP_01968199.1| hypothetical protein RUMTOR_01767 [Ruminococcus torques ATCC 27756]
 gi|317502207|ref|ZP_07960381.1| V-type sodium ATPase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088773|ref|ZP_08337683.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847173|gb|EDK24091.1| hypothetical protein RUMTOR_01767 [Ruminococcus torques ATCC 27756]
 gi|316896416|gb|EFV18513.1| V-type sodium ATPase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407296|gb|EGG86799.1| V-type ATP synthase subunit beta 2 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 461

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 159/320 (49%), Gaps = 26/320 (8%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPID 114
           +G+++ I  D   I      E +SL +    L  H     +SP     GR  N +G PID
Sbjct: 41  IGRIVEIYEDKAVIQVFEGSENMSLKNTHTKLTGHPMEIALSPD--ILGRTFNGIGNPID 98

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L  ++       + R+      +TGI  ID  T L  GQ++ +F+G+G+  
Sbjct: 99  GLGPIAS-TLRRDVNGSPLNPVKREYPRNYIRTGISAIDGLTTLIRGQKLPIFSGNGLPH 157

Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV------V 221
             L +   +       SD    ++ + +G     V+  + D+  +  ++S V       +
Sbjct: 158 DQLAAQIVKQASLGENSDEKFAIVFAAMG-----VKHDVADFFRNTFEESGVADHVAMFL 212

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVAR 280
             +++  + R + P  A+T AEY + + + ++L+IL  +T FA ++RE++++ GE+P  +
Sbjct: 213 NLANDPVVERLITPKVALTAAEYLAFEQNMHILVILTDMTSFAEAMREVSSSKGEIPSRK 272

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP  ++SEL  + ER G  +   G++T +  + +  D+   PI D    I +G IVL+R
Sbjct: 273 GYPGYLYSELATIYERAGIVQGVNGSVTQLPILTMPNDDITHPIPDLTGYITEGQIVLDR 332

Query: 341 SLAEEGRYPPVDPLASVSRL 360
            L  +  YPP++ L S+SRL
Sbjct: 333 PLNGQSIYPPINILPSLSRL 352


>gi|14718044|gb|AAK72763.1| ATP synthase beta subunit [Eubrachion ambiguum]
          Length = 373

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 142/263 (53%), Gaps = 16/263 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 33  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 91

Query: 201 EVREFIEDY-----LGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
           E  +   +      + +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 92  EGNDLYMEMKESGVINENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDV 151

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E+++  G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 152 LLFIDNIFRFVQAGSEVSSLLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 209

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 210 VYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIIGEEHYE 269

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 270 TAQRVKQTLQRYKELQDIIAILG 292


>gi|156739714|gb|ABU93510.1| ATP synthase beta subunit [Cyrtogonellum caducum]
          Length = 394

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|156739700|gb|ABU93503.1| ATP synthase beta subunit [Polystichum omeiense]
          Length = 394

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S  G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSASGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|328681599|gb|AEB32872.1| ATP synthase beta subunit [Kurzia dendroides]
          Length = 380

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|302556794|ref|ZP_07309136.1| V-type sodium ATPase, B subunit [Streptomyces griseoflavus Tu4000]
 gi|302474412|gb|EFL37505.1| V-type sodium ATPase, B subunit [Streptomyces griseoflavus Tu4000]
          Length = 469

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 9/284 (3%)

Query: 87  VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
            F  G  R+     W GRV N  G P+DG   +  G    E+       + R+   +   
Sbjct: 75  AFSGGPLRVPVGTDWLGRVCNGRGDPLDGGPPV-FGSHHAEVGGAPVNPVRREPPSEPVL 133

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG+  +D  T L  GQ++ VF+ +G+    L +  A          S+V   G  +    
Sbjct: 134 TGVGAVDTLTTLARGQKLPVFSTAGLPHLELAAQIAAQSTTSGAAFSVVFA-GMGLTHAD 192

Query: 207 EDYLGDNLKKS------VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSI 259
             ++ D L++       V+++ T+D+  I R + P  A+T+AE+ + + G +VL+++  +
Sbjct: 193 AAFVRDALEERSAAGELVLLLNTADDPVIERILTPRIALTVAEHLAFTGGRHVLVVMSDM 252

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           T +A ++RE++   GE+P  R YP  ++S+L  L ER G      G++T +  + +   +
Sbjct: 253 TMYAEALREVSAARGEIPARRAYPGYLYSDLASLYERCGRIRGRPGSVTVLPVLTMPAGD 312

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
              P+ D    I +G IVL+      G YPP+D L+S+SRL  K
Sbjct: 313 ITHPVPDLTGYITEGQIVLSPETHARGVYPPLDALSSLSRLMRK 356


>gi|149384691|gb|ABR25154.1| ATP synthase beta chain [Drynaria rigidula]
          Length = 426

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N  G+P+D   +LG    ++   + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVPGEPVD---NLGPVRSIATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|20467365|gb|AAL27813.1| ATPase beta subunit [Ephedra sinica]
          Length = 463

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 24/319 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIR 150
            R+       GR     G+ +D   +LG  D         P PA ++  +    F+TGI+
Sbjct: 76  LRVPXGXMTXGRXXXXFGEXVD---NLGLIDTRTTFPIHRPAPAFSQLDINLAIFETGIK 132

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 133 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 192

Query: 211 GDNLKKS-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLIL 256
              +K+S              +V    +E P  R    LTA+T+AEYF    + +VLL +
Sbjct: 193 --EMKESGVINEKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFI 250

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V 
Sbjct: 251 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVP 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S  L  +       ++   
Sbjct: 309 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQE 368

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 369 VKQTLQRYKELQDIIAILG 387


>gi|240950013|ref|ZP_04754321.1| F0F1 ATP synthase subunit alpha [Actinobacillus minor NM305]
 gi|240295491|gb|EER46234.1| F0F1 ATP synthase subunit alpha [Actinobacillus minor NM305]
          Length = 513

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIENDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+ ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNADYVERFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|328681653|gb|AEB32899.1| ATP synthase beta subunit [Telaranea pulcherrima var. pulcherrima]
          Length = 380

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPXDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|328681625|gb|AEB32885.1| ATP synthase beta subunit [Zoopsis liukiuensis]
          Length = 380

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVNASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|29726140|gb|AAD00596.2| ATP synthase beta subunit [Romneya coulteri]
          Length = 488

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 154/314 (49%), Gaps = 26/314 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N  G+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVXGEPVD---NLGPVDTRXXSPIDRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +        
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 209

Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
               E  + D+  K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I R
Sbjct: 210 GVINEQNIADS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 267

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  
Sbjct: 268 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVCVPADDLT 325

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380
            P   +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +    
Sbjct: 326 XPAPATTFAHLDAXXVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTS 385

Query: 381 HRFEETRDIRLIGG 394
            R++E +DI  I G
Sbjct: 386 QRYKELQDIIAILG 399


>gi|52788844|gb|AAU87392.1| ATP synthase beta chain [Lonchitis hirsuta]
          Length = 383

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S    + +  PA  +   +    +TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV- 218
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+     K + 
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 219 ----------VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                     +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQKISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHHETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|328681663|gb|AEB32904.1| ATP synthase beta subunit [Lepidozia fauriana]
          Length = 380

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|307246573|ref|ZP_07528644.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307255558|ref|ZP_07537363.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307260009|ref|ZP_07541721.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306852445|gb|EFM84679.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306861407|gb|EFM93396.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306865845|gb|EFM97721.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 513

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|15896121|ref|NP_349470.1| F0F1 ATP synthase subunit alpha [Clostridium acetobutylicum ATCC
           824]
 gi|20137590|sp|Q9Z689|ATPA_CLOAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|15025913|gb|AAK80810.1|AE007784_7 FoF1-type ATP synthase alpha subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|4323566|gb|AAD16424.1| ATP synthase subunit alpha [Clostridium acetobutylicum ATCC 824]
 gi|325510275|gb|ADZ21911.1| F0F1 ATP synthase subunit alpha [Clostridium acetobutylicum EA
           2018]
          Length = 505

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 162/337 (48%), Gaps = 9/337 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +D  G  + +  D V    +G  E I  GD+V   G+    P      GRV+NALG+PID
Sbjct: 57  NDVYGMALNLEQDNVGCVLLGSEEGIKEGDIVKSTGKVVEVPVGEEMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K + S  +  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KAEDSKPVDIKATGVIDRQSVNQPLQTGIKAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVVVATSDESPIL 230
           + + +         D + I + +G++   V   +  +  +G  +  S+VV AT+ +S  L
Sbjct: 176 TAIAIDTILNQKGKDVICIYVAIGQKQSTVAHIVNTFEEMG-AMDYSIVVAATASDSAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP + VTIAE F  KG +VL++ D +++ A + R ++      P    YP  VF   
Sbjct: 235 QYLAPYSGVTIAENFMFKGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLH 294

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     ++   G+ITA+  +     +    I  +V SI DG I L   L   G+ 
Sbjct: 295 SRLLERAAKLSQKLGGGSITALPIIETLAGDVAGYIPTNVISITDGQIFLESELFYAGQR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P V+   SVSR+   A     KKL  +L   + ++ E
Sbjct: 355 PAVNSGISVSRVGGSAQIKAMKKLSGTLRLELAQYRE 391


>gi|904147|gb|AAA74404.1| adenosine triphosphatase [Sinofranchetia chinensis]
          Length = 498

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  ++  + +  PA  +   +   F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|160942707|ref|ZP_02089949.1| hypothetical protein FAEPRAM212_00183 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445981|gb|EDP22984.1| hypothetical protein FAEPRAM212_00183 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104093|emb|CBL01637.1| ATP synthase F1 subcomplex alpha subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 506

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 156/340 (45%), Gaps = 7/340 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G    +  + V I  +G    I  G +V   G+    P      GRV+NALG+PIDG   
Sbjct: 61  GMAQNLEENTVSIVLLGSDAGIKEGSIVKRTGKVVSVPVGDAMIGRVVNALGQPIDGAGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    I S+ P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 121 IETTEYRA-IESRAPGIIERQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIA 179

Query: 179 S-MFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
           S         D + I + +G++   V   ++       +  ++VV AT+ E   L+ +AP
Sbjct: 180 SDTIINQKGKDVICIYVAIGQKRSTVANLVQSLTEAGAMGYTIVVSATASELSPLQYIAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF  +G +VL+I D +++ A + R ++      P    YP  VF    RLLE
Sbjct: 240 YSGCAMGEYFMQQGKHVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P
Sbjct: 300 RAAKLSNELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMPAVNP 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             SVSR+   A     KK+  +L  +  ++ E +     G
Sbjct: 360 GISVSRVGGNAQIKAMKKVAGTLKLIYSQYRELQSFAQFG 399


>gi|254421647|ref|ZP_05035365.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
 gi|196189136|gb|EDX84100.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
          Length = 504

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 159/340 (46%), Gaps = 19/340 (5%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G ++  G  V   G+    P      GRVI+ LG+PIDG 
Sbjct: 60  TIGIALNLEEDNVGAVMMGTGRQVLEGSTVKSTGKIASVPVGESMLGRVIDTLGRPIDG- 118

Query: 117 DSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KGD++      I S  P  + R+ V +  +TGI  ID   P+  GQR  +      
Sbjct: 119 ----KGDINTSESRLIESMAPGIIERKSVYEPLQTGITAIDAMIPIGRGQRELIIGDRQT 174

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDES 227
           GK+ +   ++  ++D     +   +G++   V + I   E+     L  +VVV A +++ 
Sbjct: 175 GKTAIAIDTILNQADQDVICVYVAIGQKASSVAQVIGVLEER--GALDYTVVVAANANDP 232

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP T   IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF
Sbjct: 233 AALQYLAPYTGAAIAEYFMYKGKATLIIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVF 292

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      E  +G++TA+  +     + +  I  +V SI DG I L+  L   
Sbjct: 293 FLHSRLLERAAKLSPELGEGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNS 352

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A +   KK+   +   + +F+E
Sbjct: 353 GLRPAINAGISVSRVGSAAQTKAIKKVAGKVKLELAQFDE 392


>gi|328681615|gb|AEB32880.1| ATP synthase beta subunit [Kurzia helophila]
          Length = 380

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|226326003|ref|ZP_03801521.1| hypothetical protein COPCOM_03821 [Coprococcus comes ATCC 27758]
 gi|225205545|gb|EEG87899.1| hypothetical protein COPCOM_03821 [Coprococcus comes ATCC 27758]
          Length = 457

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 31/365 (8%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           DFVV+ GK    +G+++ +  D   I      E +SL +    L  H     I  S    
Sbjct: 31  DFVVN-GKEH-KMGRIVEVYKDKAIIQVFEGTENMSLNNTHTRLTGH--PMEIGLSEEML 86

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKGF-KTGIRVIDIFTPL 158
           GR  N +G+PID       G +++E +  V   P    R+   + + +TGI  ID  T L
Sbjct: 87  GRTFNGIGEPIDD-----LGPITVEEVRDVNGLPLNPVRREYPRNYIRTGISAIDGLTTL 141

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLG 211
             GQ++ +F+G+G+    L +   +             ++ + +G +      F   +  
Sbjct: 142 IRGQKLPIFSGNGLPHDQLAAQIVKQASLGGSTNEDFAIVFAAMGVKHDVADFFRRTFEE 201

Query: 212 DNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
             +   V +       P++ ++  P  A+T AEY +  K  ++L+IL  +T FA ++RE+
Sbjct: 202 SGVANHVAMFLNLANDPVVERLITPKVALTAAEYLAFEKNMHILVILTDMTSFAEAMREV 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +++ GE+P  +GYP  ++SEL  L ER G  E   G++T +  + +  D+   PI D   
Sbjct: 262 SSSKGEIPSRKGYPGYLYSELATLYERAGIVEGVNGSVTQLPILTMPNDDITHPIPDLTG 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWS-ADEKKLVSSLTHLIHRFE 384
            I +G IVL+R+L  +  YPP+  L S+SRL      K ++  D + L + L     +  
Sbjct: 322 YITEGQIVLDRNLHGQAIYPPISVLPSLSRLMKDGIGKGYTREDHQDLANQLFSAYAKVG 381

Query: 385 ETRDI 389
           E R++
Sbjct: 382 EARNL 386


>gi|185178868|ref|ZP_02964641.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|188024441|ref|ZP_02997094.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|188518474|ref|ZP_03003961.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|225551191|ref|ZP_03772137.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
 gi|184209505|gb|EDU06548.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 5 str. ATCC 27817]
 gi|188018735|gb|EDU56775.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 7 str. ATCC 27819]
 gi|188998194|gb|EDU67291.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 11 str. ATCC 33695]
 gi|225379006|gb|EEH01371.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 8 str. ATCC 27618]
          Length = 454

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 166/328 (50%), Gaps = 19/328 (5%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           +E+++ D++ +  + F +         + N  G P+   D   K    +E+ S +   +N
Sbjct: 58  KELAINDVIVNTNKSFMVPVGNDAKNNIYNFWGNPLLKTD---KKPQYVEMNSTI---LN 111

Query: 138 RQRVEKGFK---TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS----MFARSDCFDKV 190
            + V+K  +   TGI+ ID F P+  G ++G+F G+G+GK+ L+        R    +  
Sbjct: 112 ERYVDKSVEIVETGIKAIDFFMPILKGYKLGIFGGAGVGKTVLMKEIIFNLNRHKQANSN 171

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I    GER RE  E  ++    NL   SV+ ++  +E+P  R       +T AEY   + 
Sbjct: 172 IFIGSGERSREAIELYDELNASNLMPNSVMFISKMNEAPGARSSIVPIGITAAEYLRDQN 231

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
            +NVLL +D+I RF  +  E++T  G+ P   GY +++ S++  +  R+   + + G+IT
Sbjct: 232 KENVLLFIDNIYRFIQAENEVSTALGKKPSVGGYQSTLESDVTHVQNRL--FKNKNGSIT 289

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSA 367
           +  ++ +  D+ +DP A +V + LDG +VL+R+ A +  +P  DPLAS +   D K    
Sbjct: 290 SFQTIFLPMDDLSDPSAVAVFNHLDGKLVLSRTQAAKNIFPAFDPLASSTNAIDPKIIGQ 349

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGY 395
                +     ++  +++  D+ LI G+
Sbjct: 350 RHYDAIIETKKVLKAYKDLEDVILILGF 377


>gi|17224745|gb|AAL37094.1| ATP synthase beta subunit [Stenomeris borneensis]
          Length = 473

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 153/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 80  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDPKLSIFETGIKVVDLLAP 136

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F  +G GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 137 XRRGGKIGLFGEAGXGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 196

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 197 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 256

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 314

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYK 374

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 375 ELQDIIAILG 384


>gi|87125417|ref|ZP_01081263.1| ATP synthase F1, alpha subunit [Synechococcus sp. RS9917]
 gi|86167186|gb|EAQ68447.1| ATP synthase F1, alpha subunit [Synechococcus sp. RS9917]
          Length = 506

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 159/336 (47%), Gaps = 19/336 (5%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE + +  G  V   G+    P      GRV+N LG+PIDG    
Sbjct: 63  IALNLEDDNVGAVLMGEGLGIQEGSTVRATGKIASVPVGDALLGRVVNPLGQPIDG---- 118

Query: 120 GKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KGDL+      I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 -KGDLATNETRLIESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILR 231
            +   ++  + D     +   VG++   V +  E  L +   L  +VVV A + E   L+
Sbjct: 178 AIAIDTILNQKDQDVVCVYVAVGQKAASVAQVTE-VLRERGALDYTVVVAANASEPAALQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  +IAE+F  KG   L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGASIAEFFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER         KG++TA+  +     + +  I  +V SI DG + L+  L   G  P
Sbjct: 297 RLLERAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A +   KK+  +L   + +F+E
Sbjct: 357 AINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|328681611|gb|AEB32878.1| ATP synthase beta subunit [Isolembidium anomalum]
          Length = 380

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|258544333|ref|ZP_05704567.1| F-ATPase subunit alpha [Cardiobacterium hominis ATCC 15826]
 gi|258520413|gb|EEV89272.1| F-ATPase subunit alpha [Cardiobacterium hominis ATCC 15826]
          Length = 513

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 164/349 (46%), Gaps = 30/349 (8%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G  + +  D V +  +G  + +S GD V   GR    P      GRV+NALG+PIDG   
Sbjct: 61  GLALNLERDSVGVVILGEYDHLSEGDKVTCTGRILEVPVGRELLGRVVNALGQPIDG--- 117

Query: 119 LGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KGD+    S  I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 118 --KGDIKTSESSPIEKIAPGVIERQSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPI 229
           + +   ++  + D   K I   +G++   +   +   E++  D LK +++V AT+ +S  
Sbjct: 176 TAIAVDAIINQRDTGVKCIYVAIGQKASSIAAVVRKLEEH--DALKHTIIVAATASDSAA 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ +AP     + EYF  +G++ L++ D +T+ A + R+++      P    YP  VF  
Sbjct: 234 MQYIAPYAGCAMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLKRPPGREAYPGDVFYL 293

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G  + + G++TA+  +     + +  +  +V SI DG I
Sbjct: 294 HSRLLERASRINADEVERLTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 353

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   L   G  P ++   SVSR+   A +   KKL   +   + ++ E
Sbjct: 354 FLETDLFNAGIRPAINAGLSVSRVGGAAQTKVIKKLGGGVRLALAQYRE 402


>gi|223041782|ref|ZP_03611973.1| FOF1 ATP synthase subunit alpha [Actinobacillus minor 202]
 gi|223017408|gb|EEF15828.1| FOF1 ATP synthase subunit alpha [Actinobacillus minor 202]
          Length = 513

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIENDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+ ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNADYVERFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|171920713|ref|ZP_02931929.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|209554506|ref|YP_002284472.1| F0F1 ATP synthase subunit beta [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225550849|ref|ZP_03771798.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
 gi|171903454|gb|EDT49743.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 13 str. ATCC 33698]
 gi|209542007|gb|ACI60236.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 10 str. ATCC 33699]
 gi|225380003|gb|EEH02365.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 2 str. ATCC 27814]
          Length = 454

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 166/328 (50%), Gaps = 19/328 (5%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           +E+++ D++ +  + F +         + N  G P+   D   K    +E+ S +   +N
Sbjct: 58  KELAINDVIVNTNKSFMVPVGNDAKNNIYNFWGNPLLKTD---KKPQYVEMNSTI---LN 111

Query: 138 RQRVEKGFK---TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS----MFARSDCFDKV 190
            + V+K  +   TGI+ ID F P+  G ++G+F G+G+GK+ L+        R    +  
Sbjct: 112 ERYVDKSVEIVETGIKAIDFFMPILKGYKLGIFGGAGVGKTVLMKEIIFNLNRHKQANSN 171

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I    GER RE  E  ++    NL   SV+ ++  +E+P  R       +T AEY   + 
Sbjct: 172 IFIGSGERSREAIELYDELNASNLMPNSVMFISKMNEAPGARSSIVPIGITAAEYLRDQN 231

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
            +NVLL +D+I RF  +  E++T  G+ P   GY +++ S++  +  R+   + + G+IT
Sbjct: 232 KENVLLFIDNIYRFIQAENEVSTALGKKPSVGGYQSTLESDVTHVQNRL--FKNKNGSIT 289

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSA 367
           +  ++ +  D+ +DP A +V + LDG +VL+R+ A +  +P  DPLAS +   D K    
Sbjct: 290 SFQTIFLPMDDLSDPSAVAVFNHLDGKLVLSRAQAAKNIFPAFDPLASSTNAIDPKIIGQ 349

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGY 395
                +     ++  +++  D+ LI G+
Sbjct: 350 RHYDAIIETKKVLKAYKDLEDVILILGF 377


>gi|149384507|gb|ABR25076.1| ATP synthase beta chain [Cyrtomium falcatum]
          Length = 426

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|294783125|ref|ZP_06748449.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 1_1_41FAA]
 gi|294480003|gb|EFG27780.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 1_1_41FAA]
          Length = 500

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 159/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVIN+LG+PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGDNLLGRVINSLGEPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-IADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V + I   L D   ++ + +V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQNVKCIYVAIGQKRSTVAQ-IYKKLSDLGCMEYTTIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLDLAQYTE 391


>gi|256426022|ref|YP_003126675.1| ATP synthase F1, beta subunit [Chitinophaga pinensis DSM 2588]
 gi|256040930|gb|ACU64474.1| ATP synthase F1, beta subunit [Chitinophaga pinensis DSM 2588]
          Length = 500

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 158/332 (47%), Gaps = 45/332 (13%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N +G+ IDG   LG  D S    I  K P   +     +   TGI+VID+  P   
Sbjct: 87  GRLFNVVGEAIDG---LGDVDSSNGYPIHRKPPKFEDLATDTEVLFTGIKVIDLIEPYAK 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIE------ 207
           G +IG+F G+G+GK+ L+       +  ++ + + + VGER RE    +RE IE      
Sbjct: 144 GGKIGLFGGAGVGKTVLIQELINNIAKGYEGLSVFAGVGERTREGNDLMREMIEAGIVKY 203

Query: 208 ------------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF---- 245
                             D  G    ++  +    +E P  R    L+ +T+AEYF    
Sbjct: 204 GAKFQESMEHGGWDLSAVDKEGLKQSQATFIFGQMNEPPGARARVALSGLTMAEYFRDGD 263

Query: 246 --SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
             +  G ++L  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  +
Sbjct: 264 GTAGGGKDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTK 321

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+R +++ G YP V PL S SR+   
Sbjct: 322 NGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLDRKISDLGIYPAVSPLESTSRILSP 381

Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           +   +        +  ++ R++E +DI  I G
Sbjct: 382 SIVGEAHYNCAQRVKMILQRYKELQDIIAILG 413


>gi|149384613|gb|ABR25129.1| ATP synthase beta chain [Polystichum transkeiense]
          Length = 426

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|149384777|gb|ABR25197.1| ATP synthase beta chain [Thelypteris abrupta]
          Length = 394

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 5   TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 61

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 62  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 121

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +
Sbjct: 122 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLPFIDNIFRFVQA 181

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 182 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 239

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 240 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 298

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 299 KELQDIIAILG 309


>gi|14718142|gb|AAK72810.1| ATP synthase beta subunit [Mouriri cyphocarpa]
          Length = 383

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 141/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+PID    LG  D   +  I    P  +        F+TGI+ +D+  
Sbjct: 93  GATXGRIFNVLGEPID---ELGPADTRTTSPIHRSAPAFIQLDTKLSIFETGIKDVDLLA 149

Query: 157 PLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED 208
           P   G +IG+F G+G+GK+     L++  A++     V   +  ER RE      E  E 
Sbjct: 150 PYRRGGKIGLFGGAGVGKTVXIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 208

Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            + + L     K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 209 GVINELNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 268

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 269 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 326

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 327 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363


>gi|328681649|gb|AEB32897.1| ATP synthase beta subunit [Telaranea wallichiana]
          Length = 380

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVEASTTFPIHRAAPAFTQLDTKLAIFETGIKVVDLLAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEENISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|149384625|gb|ABR25135.1| ATP synthase beta chain [Teratophyllum wilkesianum]
          Length = 426

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESRVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|149384769|gb|ABR25193.1| ATP synthase beta chain [Triplophyllum funestum]
          Length = 426

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALPGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R+
Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTPQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|55056886|emb|CAF21944.1| ATP synthase beta subunit [Gnetum gnemon]
          Length = 447

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    D +  I    P           F+TGI+V+D+  P
Sbjct: 77  ATLGRIFNVLGEPVD---NLGPVDTDTTFPIHRPAPAFPQLDTNLSIFETGIKVVDLLAP 133

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 134 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 193

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R          AEYF    D +VLL +D+I RF  +
Sbjct: 194 INEKNIAESKVALVYGQMNEPPGARMRVGXLPXAKAEYFRDVNDQDVLLFIDNIFRFVQA 253

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP  
Sbjct: 254 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 311

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       ++  ++   +   + R++
Sbjct: 312 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEQHYEIAQGVKQTLQRYK 371

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 372 ELQDIIAILG 381


>gi|269859752|ref|XP_002649600.1| vacuolar ATP synthase subunit B [Enterocytozoon bieneusi H348]
 gi|220066963|gb|EED44432.1| vacuolar ATP synthase subunit B [Enterocytozoon bieneusi H348]
          Length = 467

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 152/304 (50%), Gaps = 20/304 (6%)

Query: 78  GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAM 136
           G +++   + F     +++ S    GR+ +     IDG   +   D LS+E     P A 
Sbjct: 68  GIDVNNTQVTFTGDILKMNVSEDMLGRIFDGSSNVIDGGPPIIPDDYLSIEGQPLNPEA- 126

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDK 189
            R   E+  +TGI  ID+ + +  GQ+I +F+GSG+  + L +   R        DC D 
Sbjct: 127 -RIYPEEMIQTGISAIDVMSSIARGQKIPIFSGSGLPHNELAAQICRQAGLVKKKDCLDM 185

Query: 190 ------VIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTI 241
                 ++   +G    E  +F +D   +N  L+++V  +  + +  I R + P   +T 
Sbjct: 186 SEDNFCIVFGAIG-VNMETAKFFKDQFEENGSLERTVCFLNLASDPTIERIITPRLVLTA 244

Query: 242 AEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +EY + + + +VL I+  I+ +A ++RE++    E+P  RGYP  ++++L  L ER G  
Sbjct: 245 SEYLAYETERHVLTIMTDISSYADALREVSAAREEVPGRRGYPGYMYTDLSTLYERAGRI 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E + G+IT +  + +  D+   PI D    I +G I ++R +   G YPP++ L S+SRL
Sbjct: 305 EGKNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYIDRKMHNAGIYPPINVLPSLSRL 364

Query: 361 ADKA 364
              A
Sbjct: 365 MKSA 368


>gi|188524169|ref|ZP_03004233.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|195867494|ref|ZP_03079498.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273344|ref|ZP_03205880.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|195659791|gb|EDX53171.1| ATP synthase F1, beta subunit family protein [Ureaplasma
           urealyticum serovar 12 str. ATCC 33696]
 gi|195660970|gb|EDX54223.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249864|gb|EDY74644.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
          Length = 454

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 166/328 (50%), Gaps = 19/328 (5%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           +E+++ D++ +  + F +         + N  G P+   D   K    +E+ S +   +N
Sbjct: 58  KELAINDVIVNTNKSFMVPVGNDAKNNIYNFWGNPLLKTD---KKPQYVEMNSTI---LN 111

Query: 138 RQRVEKGFK---TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS----MFARSDCFDKV 190
            + V+K  +   TGI+ ID F P+  G ++G+F G+G+GK+ L+        R    +  
Sbjct: 112 ERYVDKSVEIVETGIKAIDFFMPILKGYKLGIFGGAGVGKTVLMKEIIFNLNRHKQANSN 171

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I    GER RE  E  ++    NL   SV+ ++  +E+P  R       +T AEY   + 
Sbjct: 172 IFIGSGERSREAIELYDELNASNLMPNSVMFISKMNEAPGARSSIVPIGITAAEYLRDQN 231

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
            +NVLL +D+I RF  +  E++T  G+ P   GY +++ S++  +  R+   + + G+IT
Sbjct: 232 KENVLLFIDNIYRFIQAENEVSTALGKKPSVGGYQSTLESDVTHVQNRL--FKNKNGSIT 289

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSA 367
           +  ++ +  D+ +DP A +V + LDG +VL+R+ A +  +P  DPLAS +   D K    
Sbjct: 290 SFQTIFLPMDDLSDPSAVAVFNHLDGKLVLSRAQAAKNIFPAFDPLASSTNAIDHKIIGQ 349

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGY 395
                +     ++  +++  D+ LI G+
Sbjct: 350 RHYDAIIETKKVLKAYKDLEDVILILGF 377


>gi|164566129|gb|ABY61207.1| ATP synthase beta subunit [Danaea oblanceolata]
          Length = 369

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 140/264 (53%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 24  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 83

Query: 205 FIEDYL---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 84  GNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 143

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 144 LLFIDNIFRFVQAGSEVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQA 201

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 202 VYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 260

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 261 ETAQGVKQTLQRYKELQDIIAILG 284


>gi|149384763|gb|ABR25190.1| ATP synthase beta chain [Tectaria prolifera]
          Length = 426

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLPAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|119511011|ref|ZP_01630132.1| ATP synthase subunit B [Nodularia spumigena CCY9414]
 gi|119464356|gb|EAW45272.1| ATP synthase subunit B [Nodularia spumigena CCY9414]
          Length = 465

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 157/321 (48%), Gaps = 10/321 (3%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G +V + G   ++       GR+ N  G+ ID    +  G+        VP  + + 
Sbjct: 70  LARGSVVINTGHPLQVPVGKRLLGRMFNVFGETIDRKVEISGGEWRSLHQPPVP-LIQQS 128

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+ IDI  PL  G + G+F G+G+GK+ L++    +   +   ISL   +G
Sbjct: 129 TSSEILETGIKAIDILAPLERGGKAGLFGGAGVGKTVLITEMIHNIVSEYQGISLFCGIG 188

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  E   D      L+ ++++    +E P  R      A+T+AEYF      +VLL
Sbjct: 189 ERSREAEELYRDMQEAGVLENTIMIFGQMNEPPGARFRVGQAALTMAEYFRDDVKQDVLL 248

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++D+I RF  + +E++   G LP   GY  ++ +EL  L ERI  +    G IT+V +V 
Sbjct: 249 LIDNIFRFIQAGQEVSGLMGRLPSRVGYQPTLETELAELEERI--ANTATGAITSVQAVY 306

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLV 373
           V  D+  DP A      L   IVL+R  A EG YP +DPL S S+ L          ++ 
Sbjct: 307 VPADDFTDPAAVHTFGHLSASIVLSRKRASEGFYPAIDPLKSNSKMLTPPIVGKHHYQIA 366

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
            ++   +  +E+ +DI  I G
Sbjct: 367 QAVRQTLANYEDLKDIIAILG 387


>gi|113954358|ref|YP_731510.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CC9311]
 gi|123132412|sp|Q0I7R2|ATPA_SYNS3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|113881709|gb|ABI46667.1| ATP synthase F1, alpha subunit [Synechococcus sp. CC9311]
          Length = 506

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 176/390 (45%), Gaps = 22/390 (5%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q  EDY K++ V   G +  +      V  L Q V  G+ V  +       G  + + 
Sbjct: 13  LKQQIEDYDKSVSVTNVGTVLQVGDGIARVYGLQQ-VMAGELVEFEDGTE---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLS 125
            D V I  +G G  I  G  V   G+    P      GRV+N LG  IDG     KGDL+
Sbjct: 69  DDNVGIVLMGEGLGIQEGSTVRATGKIASVPVGDAMLGRVVNPLGVAIDG-----KGDLA 123

Query: 126 ME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--S 179
                 I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   +
Sbjct: 124 TTESRLIESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAICIDT 183

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLT 237
           +  ++D     +   +G++   V +  E  L +   L  +VVV A + E   L+ +AP T
Sbjct: 184 ILNQADQDVVCVYVAIGQKAASVAQVTE-VLRERGALDYTVVVAANASEPAALQYLAPYT 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
             +IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER 
Sbjct: 243 GASIAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERA 302

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                   KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   
Sbjct: 303 AKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGI 362

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SVSR+   A +   KK+  +L   + +F+E
Sbjct: 363 SVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|904109|gb|AAA70371.1| adenosine triphosphatase [Holboellia latifolia]
          Length = 498

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|149384429|gb|ABR25037.1| ATP synthase beta chain [Asplenium theciferum]
          Length = 382

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMELINNIAKAHGGVSVSGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 97  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 215 VYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 273

Query: 373 --VSSLTHLIHRFEETRDIRLIGG 394
                +   + R++E +DI  I G
Sbjct: 274 DTAQGVKQTLQRYKELQDIIAILG 297


>gi|149384499|gb|ABR25072.1| ATP synthase beta chain [Ctenitis sloanei]
          Length = 426

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|14718107|gb|AAK72793.1| ATP synthase beta subunit [Lepuropetalon spathulatum]
          Length = 366

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 26  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 85

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 86  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 145

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +
Sbjct: 146 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQA 203

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 204 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 263

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 264 TAQRVKQTLQRYKELQDIIAILG 286


>gi|49182441|gb|AAT57699.1| ATP synthase beta chain [Porella pinnata]
          Length = 369

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAILG 295


>gi|165977084|ref|YP_001652677.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|226739838|sp|B0BRX4|ATPA_ACTPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|165877185|gb|ABY70233.1| ATP synthase alpha chain [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 513

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|42558388|gb|AAS19903.1| ATP synthase beta chain [Prosaptia contigua]
 gi|42558392|gb|AAS19905.1| ATP synthase beta chain [Prosaptia pubipes]
          Length = 422

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGLE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|312369871|gb|ADQ74315.1| ATP synthase CF1 beta subunit [Mandragora caulescens]
 gi|312369873|gb|ADQ74316.1| ATP synthase CF1 beta subunit [Mandragora caulescens]
 gi|312369875|gb|ADQ74317.1| ATP synthase CF1 beta subunit [Mandragora caulescens]
 gi|312369877|gb|ADQ74318.1| ATP synthase CF1 beta subunit [Mandragora chinghaiensis]
 gi|312369879|gb|ADQ74319.1| ATP synthase CF1 beta subunit [Mandragora chinghaiensis]
          Length = 363

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 21/266 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 79

Query: 201 EVREFI----------EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           E  +            E+ +G++  K  +V    +E P  R    LTA+T+AEYF    +
Sbjct: 80  EGNDLYMEMKESGVINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINE 137

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 138 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITS 195

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 196 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEE 255

Query: 370 K-KLVSSLTHLIHRFEETRDIRLIGG 394
             +    +   + R++E +DI  I G
Sbjct: 256 HYETAQRVKQTLQRYKELQDIIAILG 281


>gi|237809869|ref|YP_002894309.1| F0F1 ATP synthase subunit alpha [Tolumonas auensis DSM 9187]
 gi|259585439|sp|C4LDW2|ATPA_TOLAT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|237502130|gb|ACQ94723.1| ATP synthase F1, alpha subunit [Tolumonas auensis DSM 9187]
          Length = 513

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 164/349 (46%), Gaps = 24/349 (6%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDG 115
           ++ G  + +  D V    +G   +++ G  V   GR    P      GRV+N LG+PIDG
Sbjct: 58  NSYGLALNLERDSVGAIVMGPYTDLAEGQKVTGTGRILEVPVGRGLLGRVVNTLGQPIDG 117

Query: 116 DDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
              +   G   +E+++  P  + RQ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 118 KGPIENDGFAPVEVIA--PGVIERQSVSQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPI 229
           + L   ++  + D   K +   +G++   +   +   E++    L  ++VVVA++ ES  
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEH--GALANTIVVVASASESAS 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF  
Sbjct: 234 LQYLAPYSGCTMGEYFRDRGEDALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G  + + G++TA+  +     + +  +  +V SI DG I
Sbjct: 294 HSRLLERASRVNTDYVEAFTKGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 353

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E
Sbjct: 354 FLTTQLFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|164566057|gb|ABY61171.1| ATP synthase beta subunit [Danaea antillensis]
          Length = 352

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 140/264 (53%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 7   FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 66

Query: 205 FIEDYL---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 67  GNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 126

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 127 LLFIDNIFRFVQAGSEVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQA 184

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 185 VYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 243

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 244 ETAQGVKQTLQRYKELQDIIAILG 267


>gi|122051537|gb|ABM65871.1| ATP synthase beta chain [Grammitis kyimbilensis]
          Length = 412

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 64  LGRISNVLGEPVDNLGPVTSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 121

Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +  
Sbjct: 122 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 180

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 181 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 240

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 241 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 298

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R++E
Sbjct: 299 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTXQRYKE 357

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 358 LQDIIAILG 366


>gi|14718113|gb|AAK72796.1| ATP synthase beta subunit [Limnanthes douglasii]
          Length = 373

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 32  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 91

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 92  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 151

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +
Sbjct: 152 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQA 209

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 210 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 269

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 270 TAQRVKQTLQRYKELQDIIAILG 292


>gi|328681629|gb|AEB32887.1| ATP synthase beta subunit [Psiloclada clandestina]
          Length = 380

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPASTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|190150979|ref|YP_001969504.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307264336|ref|ZP_07545924.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|226739837|sp|B3H2P5|ATPA_ACTP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189916110|gb|ACE62362.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|306870288|gb|EFN02044.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 513

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVSADYVESFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|149798677|gb|ABR32029.1| ATP synthase beta chain [Cystopteris reevesiana]
          Length = 426

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   V +R LA +G YP VDP  S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVPSRGLAAKGIYPAVDPPDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|32034346|ref|ZP_00134546.1| COG0056: F0F1-type ATP synthase, alpha subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209112|ref|YP_001054337.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           L20]
 gi|303252039|ref|ZP_07338209.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248697|ref|ZP_07530710.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|158513514|sp|A3N2U6|ATPA_ACTP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|126097904|gb|ABN74732.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|302649103|gb|EFL79289.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306854624|gb|EFM86814.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 513

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|312369869|gb|ADQ74314.1| ATP synthase CF1 beta subunit [Mandragora autumnalis]
 gi|312369881|gb|ADQ74320.1| ATP synthase CF1 beta subunit [Mandragora officinarum]
 gi|312369883|gb|ADQ74321.1| ATP synthase CF1 beta subunit [Mandragora officinarum]
 gi|312369885|gb|ADQ74322.1| ATP synthase CF1 beta subunit [Mandragora officinarum]
 gi|312369887|gb|ADQ74323.1| ATP synthase CF1 beta subunit [Mandragora officinarum]
 gi|312369889|gb|ADQ74324.1| ATP synthase CF1 beta subunit [Mandragora turcomanica]
          Length = 363

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 21/266 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 79

Query: 201 EVREFI----------EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           E  +            E+ +G++  K  +V    +E P  R    LTA+T+AEYF    +
Sbjct: 80  EGNDLYMEMKESGVINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINE 137

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 138 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITS 195

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 196 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEE 255

Query: 370 K-KLVSSLTHLIHRFEETRDIRLIGG 394
             +    +   + R++E +DI  I G
Sbjct: 256 HYETAQRVKQTLQRYKELQDIIAILG 281


>gi|56675905|emb|CAB89738.2| ATP synthase beta subunit [Viscum album]
          Length = 456

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+
Sbjct: 64  LRVPVGKATLGRIFNVLGEPVD---NLGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIK 120

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 121 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 180

Query: 211 ---------GDNLKKSVVVVA--TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                      N+ +S V       +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 181 EXXXSGVINXXNIAESKVXXXYRQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDN 240

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D
Sbjct: 241 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXGGSITSIQAVYVPAD 298

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP V PL S S +       +E  +    + 
Sbjct: 299 DLTDPAXATTFAHLDATTVLSRGLAAKGIYPAVXPLXSXSXMLQXRIVGEEHYETXXRVK 358

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 359 QTLQRYKELQDIIAILG 375


>gi|14718261|gb|AAK72868.1| ATP synthase beta subunit [Viscum album]
          Length = 455

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 20/317 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
            R+       GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+
Sbjct: 64  LRVPVGKATLGRIFNVLGEPVD---NLGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIK 120

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 121 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 180

Query: 211 ---------GDNLKKSVVVVA--TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258
                      N+ +S V       +E P  R    LTA+T+AEYF    + +VLL +D+
Sbjct: 181 EXXXSGVINXXNIAESKVXXXYRQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDN 240

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D
Sbjct: 241 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXGGSITSIQAVYVPAD 298

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           +  DP   +  + LD   VL+R LA +G YP V PL S S +       +E  +    + 
Sbjct: 299 DLTDPAXATTFAHLDATTVLSRGLAAKGIYPAVXPLXSXSXMLQXRIVGEEHYETXXRVK 358

Query: 378 HLIHRFEETRDIRLIGG 394
             + R++E +DI  I G
Sbjct: 359 QTLQRYKELQDIIAILG 375


>gi|156739806|gb|ABU93556.1| ATP synthase beta subunit [Ctenitopsis hainanensis]
          Length = 394

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V +     +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVHGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 269 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|254485927|ref|ZP_05099132.1| ATP synthase F1, alpha subunit [Roseobacter sp. GAI101]
 gi|214042796|gb|EEB83434.1| ATP synthase F1, alpha subunit [Roseobacter sp. GAI101]
          Length = 512

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 164/327 (50%), Gaps = 11/327 (3%)

Query: 75  VGIGEEISLGDLVFHWGRF---RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           +G  + +++G+ V    R    ++ P+    GRV++ALG   DG   + + D    + ++
Sbjct: 80  LGASDAVTVGESVTRTHRVVSAKVGPA--LLGRVVDALGNARDGAGVI-QTDFLRPVEAE 136

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDK 189
            P  ++R+ + +   TGI+V+D   P+  GQR  +      GK+++   ++  +      
Sbjct: 137 APKILDRRAISRPLATGIKVVDAAVPVGLGQRELIIGDRQTGKTSIAVDAILNQKSTQVI 196

Query: 190 VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   +G+RG  V + I     G  + +S+++ A  +++  L  +AP  A+T+AEYF+++
Sbjct: 197 CIYCAIGQRGDAVAKVIGAIRDGGMMARSIIMSAGDEDAAGLAYVAPYAAMTMAEYFAAQ 256

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GN 306
             +VL++LD +T  A S RE++      P    +P  +F    RLLER G        G+
Sbjct: 257 ARDVLIVLDDLTHHARSYRELSLLLRRPPGREAFPGDIFYIHARLLERAGQFTHAAGGGS 316

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT +  V    +N +  I  ++ SI DG I L+  L  + ++P VD   SVSR+  KA S
Sbjct: 317 ITVLPVVETQAENLSAYIPTNLISITDGQIYLSPRLVRKNQFPAVDLGVSVSRVGGKAQS 376

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIG 393
              + +  +L   + +FEE  D    G
Sbjct: 377 EAFRAVSGNLRVTLAQFEELEDFARFG 403


>gi|164566101|gb|ABY61193.1| ATP synthase beta subunit [Danaea leprieurii]
 gi|164566143|gb|ABY61214.1| ATP synthase beta subunit [Danaea trichomanoides]
          Length = 365

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 140/264 (53%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 20  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 79

Query: 205 FIEDYL---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 80  GNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 139

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 140 LLFIDNIFRFVQAGSEVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQA 197

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 198 VYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 256

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 257 ETAQGVKQTLQRYKELQDIIAILG 280


>gi|3850902|gb|AAC72143.1| ATP synthase beta subunit [Placospermum coriaceum]
          Length = 490

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG      +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPXXXRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|289766053|ref|ZP_06525431.1| ATP synthase F1 sector subunit alpha [Fusobacterium sp. D11]
 gi|289717608|gb|EFD81620.1| ATP synthase F1 sector subunit alpha [Fusobacterium sp. D11]
          Length = 453

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVINALG PIDG  
Sbjct: 13  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPTGDELLGRVINALGDPIDGKG 72

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 73  EI-HADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 131

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V +  +    LG  +  +++V AT+ E+  L+ M
Sbjct: 132 AIDTIINQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLG-CMDYTIIVAATASEAAPLQYM 190

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 191 APYSGVAIGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 250

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 251 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 310

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 311 NAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 344


>gi|149798647|gb|ABR32014.1| ATP synthase beta chain [Adiantum peruvianum]
          Length = 385

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 26/312 (8%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 58  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQN 117

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVS 177

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 178 ALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 235

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQD 294

Query: 389 IRLIGGYRPGVD 400
           I  I    PG+D
Sbjct: 295 IIAI----PGLD 302


>gi|328681573|gb|AEB32859.1| ATP synthase beta subunit [Triandrophyllum subtrifidum]
          Length = 380

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAILG 295


>gi|307352397|ref|YP_003893448.1| H+transporting two-sector ATPase alpha/subunit beta central region
           [Methanoplanus petrolearius DSM 11571]
 gi|307155630|gb|ADN35010.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Methanoplanus petrolearius DSM 11571]
          Length = 459

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 26/288 (9%)

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-- 183
           +EI         R   ++  +TGI  ID    L  GQ++ +F+GSG+  + +    AR  
Sbjct: 107 LEITGAAINPYARASPDEFIQTGISTIDATNTLVRGQKLPIFSGSGLPHNEIALQIARQA 166

Query: 184 ----SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTA 238
               SD    V+ + +G    E  +F+ D+     L+ +VV +  +D+  + R + P  A
Sbjct: 167 KVPGSDEQFAVVFAAMGITKEEENQFMADFERTGALEHAVVFLNLADDPAVERIITPRLA 226

Query: 239 VTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T AEY + + D +VL+IL  +T +  ++R+I     E+P  RGYP  ++++L  L ER 
Sbjct: 227 LTTAEYLAFELDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLASLYERA 286

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  + +KG++T    + + GD+   PI D    I +G IV++R L  +G YPP++ + S+
Sbjct: 287 GIIKGKKGSVTQFSILTMPGDDITHPIPDLSGYITEGQIVVSRELHRKGIYPPINVMPSL 346

Query: 358 SRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           SRL +    +  + ++ K VS               +L  GY  GVDL
Sbjct: 347 SRLMNLGIGEGMTREDHKKVSD--------------QLYAGYAEGVDL 380


>gi|307257730|ref|ZP_07539487.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863636|gb|EFM95562.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 513

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|154505369|ref|ZP_02042107.1| hypothetical protein RUMGNA_02884 [Ruminococcus gnavus ATCC 29149]
 gi|153794295|gb|EDN76715.1| hypothetical protein RUMGNA_02884 [Ruminococcus gnavus ATCC 29149]
          Length = 477

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 49/374 (13%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +FV+  G +   +G++I +  D   I      E +SL +    L  H     +SP     
Sbjct: 31  EFVI--GGSERKIGRIIELYEDKAVIQVFEGSENMSLKNTHTRLTGHPMEIALSPD--ML 86

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN--------RQRVEKGFKTGIRVIDI 154
           GR  N +G+PID    LG       I+SK+   +N        R+      +TGI  ID 
Sbjct: 87  GRTFNGIGEPID---DLGP------IVSKLKRDVNGLPLNPVMREYPRNYIRTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIE 207
            T L  GQ++ +F+G+G+    L +   +       SD    ++ + +G     V+  + 
Sbjct: 138 LTTLIRGQKLPIFSGNGLPHDQLAAQIVKQASLGDDSDEEFAIVFAAMG-----VKHDVA 192

Query: 208 DYLGDNLKKSVVV------VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSIT 260
           D+     ++S V       +  +++  + R + P  A+T+AEY + + + ++L+IL  +T
Sbjct: 193 DFFRRTFEESGVADHVAMFLNLANDPVVERLITPKVALTVAEYLAFEQNMHILVILTDMT 252

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
            FA ++RE++++ GE+P  +G+P  ++SEL  L ER G  +   G++T +  + +  D+ 
Sbjct: 253 SFAEAMREVSSSKGEIPSRKGFPGYLYSELAALYERAGIVQGVNGSVTQLPILTMPNDDI 312

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSS 375
             PI D    I +G IVL+R+L  +  YPP+  L S+SRL      A     D + L + 
Sbjct: 313 THPIPDLTGYITEGQIVLDRTLNGQSIYPPISILPSLSRLMKDGIGAGYTREDHQDLANQ 372

Query: 376 LTHLIHRFEETRDI 389
           L     +  + R++
Sbjct: 373 LFSAYAKVGDARNL 386


>gi|302339593|ref|YP_003804799.1| H+transporting two-sector ATPase alpha/subunit beta central region
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636778|gb|ADK82205.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Spirochaeta smaragdinae DSM 11293]
          Length = 465

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 143/277 (51%), Gaps = 9/277 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ + +G+PID D     G+ + ++        +R+      +TGI VID    L 
Sbjct: 93  SMLGRIFDGIGRPID-DGPSPVGEETRDVNGIAVNPTSREYPRDFIQTGISVIDGMNTLI 151

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN 213
            GQ++ +F+G+G+  + L +   R            ++ + +G +    R FI+ +    
Sbjct: 152 RGQKLPIFSGNGLPHNELAAQITRQAKIRGEGTDFAIVFAAMGVKHDVARFFIDSFESTG 211

Query: 214 LKKSVVV-VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271
           + ++V + ++ +D+  I R + P +A+T+AE+ +  +G +VL+IL  ++ +  S+RE++T
Sbjct: 212 VLENVALFLSLADDPSIERLITPRSALTLAEHLAYERGMHVLVILTDMSNYCESLREVST 271

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             GE+P  +GYP  ++S+L  + ER G  +   G+IT +  + +  D+ + PI D    I
Sbjct: 272 LRGEIPSRKGYPGYLYSDLAEIYERAGMVKGAAGSITQLPILTMPNDDISHPIPDLTGYI 331

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            +G IV  R +     YPPV  L S+SRL       D
Sbjct: 332 TEGQIVFEREMHGRAIYPPVAGLPSLSRLMKDGIGKD 368


>gi|260494333|ref|ZP_05814464.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_33]
 gi|260198479|gb|EEW95995.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_33]
          Length = 500

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVINALG PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPTGDELLGRVINALGDPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-HADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V +  +    LG  +  +++V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLG-CMDYTIIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 391


>gi|56112423|gb|AAV71166.1| ATP synthase subunit B [Phyllanthus glaucus]
          Length = 324

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 140/274 (51%), Gaps = 19/274 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 54  GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 110

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 170

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA T+AEYF    + +VLL +D+I RF  
Sbjct: 171 VINEENIAESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNEQDVLLFIDNIFRFVQ 230

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 231 AGSEVSALLGRMPSAVGYQPTLSAEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 288

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 289 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 322


>gi|49182445|gb|AAT57701.1| ATP synthase beta chain [Ptilidium ciliare]
          Length = 369

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLXPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK- 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 372 -LVSSLTHLIHRFEETRDIRLIGG 394
            +   +   + R++E +DI  I G
Sbjct: 272 DIAQGVKQTLQRYKELQDIIAILG 295


>gi|29726150|gb|AAD00601.2| ATP synthase beta subunit [Pteridophyllum racemosum]
          Length = 385

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 148/299 (49%), Gaps = 16/299 (5%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +IG+F 
Sbjct: 1   LGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTQLSIFETGIKVVDLLAPYRRGGKIGLFG 59

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV 219
           G+G+GK+ L+     +       +S+ G  G   RE  + Y+          DN+ +S V
Sbjct: 60  GAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEDNITESKV 119

Query: 220 --VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
             V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++   G +
Sbjct: 120 ALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFVDNIFRFVQAGSEVSALLGXM 179

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   
Sbjct: 180 PSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHLDATT 237

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R LA +G YP VDPL S S +       ++  +    +     R++E +DI  I G
Sbjct: 238 VLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEKHFETAQRVKQTSQRYKELQDIIAILG 296


>gi|78184065|ref|YP_376500.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CC9902]
 gi|124007220|sp|Q3AZM1|ATPA_SYNS9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78168359|gb|ABB25456.1| ATP synthase F1, alpha subunit [Synechococcus sp. CC9902]
          Length = 506

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 162/336 (48%), Gaps = 19/336 (5%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE + +  G  V   G+    P      GRVIN+LG+PIDG    
Sbjct: 63  IALNLEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGDAMLGRVINSLGRPIDG---- 118

Query: 120 GKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KGD++      I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 -KGDIAASETRLIESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILR 231
            +   ++  ++D     +   +G++   V   +E  L +   L  +V+V A++ E   L+
Sbjct: 178 AIAIDTILNQADQDMICVYVAIGQKAASVANVVE-VLRERGALGYTVIVAASASEPAALQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  +IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGASIAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER         KG++TA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A +   KK+  +L   + +F+E
Sbjct: 357 AINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|8517428|emb|CAB94296.1| ATP synthase beta subunit [Ephedra tweediana]
          Length = 475

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 157/319 (49%), Gaps = 24/319 (7%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIR 150
            R+       GR     G+ +D   +LG  D      + +  PA ++  +    F+TGI+
Sbjct: 88  LRVPXGXMTXGRXXXXFGEXVD---NLGLIDTRTTFPIHRPAPAFSQLDINLAIFETGIK 144

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+
Sbjct: 145 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 204

Query: 211 GDNLKKS-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLIL 256
              +K+S              +V    +E P  R    LTA+T+AEYF    + +VLL +
Sbjct: 205 --EMKESGVINEKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFI 262

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V 
Sbjct: 263 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVP 320

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  + LD   VL+R LA +G YP VDPL S S  L  +       ++   
Sbjct: 321 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQE 380

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 381 VKQTLQRYKELQDIIAILG 399


>gi|5758883|gb|AAD50857.1| ATP synthase beta subunit [Gymnostachys anceps]
          Length = 493

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 23/311 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE + ++E     
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGKLYMEMKESG 219

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  +     G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 280 AGSDALL--GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|21264376|sp|O03066|ATPB_BLEOC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|6724301|gb|AAB51746.2| ATP synthase beta chain [Blechnum occidentale]
          Length = 395

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 156/315 (49%), Gaps = 26/315 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +V   +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVPPFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R++E
Sbjct: 242 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 LQDIIAI----PGLD 311


>gi|156739702|gb|ABU93504.1| ATP synthase beta subunit [Cyrtomium falcatum]
          Length = 394

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|328681693|gb|AEB32919.1| ATP synthase beta subunit [Mastigobryum lenormandii]
          Length = 380

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 SG 295


>gi|319944940|ref|ZP_08019202.1| ATP synthase F1 sector alpha subunit [Lautropia mirabilis ATCC
           51599]
 gi|319741510|gb|EFV93935.1| ATP synthase F1 sector alpha subunit [Lautropia mirabilis ATCC
           51599]
          Length = 513

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 187/414 (45%), Gaps = 41/414 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL V       G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPAEISELLKSKIQNLEVSADSRNQGTVISVTDGICRIHGLSN-VMQGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR    P      GRV+N LG+PID
Sbjct: 58  -NVYGLALNLERDSVGAVILGEYESISEGDVVKTTGRILEVPVGPELIGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           G   +   +   +++ KV P  + RQ V +  +TG++ ID   P+  GQR  +      G
Sbjct: 117 GKGPINAKE--TDVIEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTG 174

Query: 174 KSTL-LSMFARSDCFDKVIISL-VGERG-------REVREFIEDYLGDNLKKSVVVVATS 224
           K+ + +         D + I + +G++        R++ EF        ++ ++VV AT+
Sbjct: 175 KTAVAIDTIINQKGKDLICIYVAIGQKASTIANVVRKLEEF------GAMEYTIVVAATA 228

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            ES  ++ +AP    T+ EYF  +G + L+I D +T+ A + R+++      P    YP 
Sbjct: 229 SESAAMQYLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPG 288

Query: 285 SVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
            VF    RLLER              G  + + G++TA+  +     + +  +  +V SI
Sbjct: 289 DVFYLHSRLLERAARVNEEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISI 348

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            DG I L   L   G  P V+P  SVSR+   A +   KKL       + ++ E
Sbjct: 349 TDGQIFLETDLFNAGIRPAVNPGISVSRVGGAAQTGLIKKLAGGSRIALAQYRE 402


>gi|312285275|gb|ADQ64379.1| ATP synthase beta subunit [Telitoxicum peruvianum]
          Length = 359

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 140/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR  N LG+PID   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GVTLGRFFNVLGEPID---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNFVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 352


>gi|189314197|gb|ACD88998.1| ATP synthase beta subunit [Pycnarrhena cauliflora]
          Length = 384

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 159/331 (48%), Gaps = 30/331 (9%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 35  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 95  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 151

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 210

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 211 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 270

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 271 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           + LD   VL+R LA +G YP VDPL S S +
Sbjct: 329 AHLDATTVLSRGLAAKGIYPAVDPLDSRSTM 359


>gi|29726122|gb|AAD00588.2| ATP synthase beta subunit [Platanus occidentalis]
          Length = 488

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG         I    P  +        F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGXXXXRTXSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 271 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 389 KELQDIIAILG 399


>gi|323388507|gb|ADX60539.1| ATP synthase beta subunit [Cupania scrobiculata]
          Length = 322

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 15  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 74

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 75  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 134

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 135 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 192

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 193 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 252

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 253 TAQRVKQTLQRYKELQDIIAILG 275


>gi|328681689|gb|AEB32917.1| ATP synthase beta subunit [Acromastigum filum]
          Length = 380

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAILG 295


>gi|328681589|gb|AEB32867.1| ATP synthase beta subunit [Kurzia hippuroides]
          Length = 373

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 88

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 89  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 265

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 266 ETAQGVKQTLQRYKELQDIIAILG 289


>gi|149798721|gb|ABR32051.1| ATP synthase beta chain [Pityrogramma austroamericana]
          Length = 385

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 152/307 (49%), Gaps = 24/307 (7%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 58  KIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 116

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 117 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 176

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 177 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 234

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 235 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 293

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 294 DIIAILG 300


>gi|49182437|gb|AAT57697.1| ATP synthase beta chain [Petalophyllum ralfsii]
          Length = 369

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAILG 295


>gi|5001581|gb|AAD37037.1|AF092111_1 ATP synthase beta subunit [Pachysandra procumbens]
          Length = 495

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D      I    P  +        F+TGI+V+D+  
Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTXXXSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 158 PYRRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMXESG 217

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 278 AGSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 336 PATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 396 KELQDIIAILG 406


>gi|62902833|gb|AAY19331.1| ATP synthase beta subunit [Perrottetia longistylis]
          Length = 475

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+   LG+P+D    +     S  I    P  +        F+TGI+V+ +  P 
Sbjct: 86  GATLGRIFXVLGEPVDNLGPVXTRTTS-PIHXSAPAFIQLDTKLSIFETGIKVVXLLAPY 144

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 204

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 205 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 264

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 265 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 322

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 323 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 382

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 383 LQDIIAILG 391


>gi|328681621|gb|AEB32883.1| ATP synthase beta subunit [Paracromastigum macrostipum]
          Length = 365

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 20  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 79

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 80  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 139

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 140 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 197

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 198 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 256

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 257 ETAQGVKQTLQRYKELQDIIAILG 280


>gi|261409679|ref|YP_003245920.1| ATP synthase F1 subunit alpha [Paenibacillus sp. Y412MC10]
 gi|261286142|gb|ACX68113.1| ATP synthase F1, alpha subunit [Paenibacillus sp. Y412MC10]
          Length = 504

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 155/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EI  GD V   GR    P      GRV+N LG+P+DG   + +   
Sbjct: 70  NVGVVILGPY---SEIKEGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLDGKGPI-EATA 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
              + S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 126 FRPVESSAPGVIDRKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTTVAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           +     K I   +G++   V + +E       L+ ++VV A++ E   L+ +AP     +
Sbjct: 186 QKGSGVKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPAPLQYIAPYAGCAM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF  KG++ L+I D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEYFMYKGEHALIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++   SVSR
Sbjct: 306 DELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESELFYSGQRPAINVGISVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+   +   + ++ E +     G
Sbjct: 366 VGGSAQIKAMKKVAGGMKLDLAQYRELQAFSQFG 399


>gi|296119530|ref|ZP_06838088.1| ATP synthase F1, alpha subunit [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967413|gb|EFG80680.1| ATP synthase F1, alpha subunit [Corynebacterium ammoniagenes DSM
           20306]
          Length = 557

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 180/376 (47%), Gaps = 26/376 (6%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL-GK 121
           NL+   I  V +G  E +  GD V   G    I     + GRVIN LG+PIDG   + G+
Sbjct: 79  NLETNSIGVVVLGNYESLKEGDQVKRTGEVLSIPVGEEFLGRVINPLGQPIDGLGPIAGE 138

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----T 176
            D  +E+  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK+     T
Sbjct: 139 EDRVLEL--QAPSVLQRQPVEEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCIDT 196

Query: 177 LLSMFARSDCFDK-----VIISLVGERGRE---VREFIEDYLGDNLKKSVVVVATSDESP 228
           +L+  A  +  DK      I   +G++G     VR+ +E+     L  + +V A + +S 
Sbjct: 197 ILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRKTLEEQ--GALDYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDLGAGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D +    
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLASY---RDLQGFAAFASDLDPVSKAQ 431

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   + + LKQS S
Sbjct: 432 LERGERLVELLKQSES 447


>gi|315649872|ref|ZP_07902954.1| ATP synthase F1, alpha subunit [Paenibacillus vortex V453]
 gi|315274671|gb|EFU38053.1| ATP synthase F1, alpha subunit [Paenibacillus vortex V453]
          Length = 504

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EI  GD V   GR    P      GRV+N LG+P+DG   +     
Sbjct: 70  NVGVVILGPY---SEIKEGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLDGKGPIEAAAF 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
              + S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 127 R-PVESSAPGVIDRKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTTVAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           +     K I   +G++   V + +E       L+ ++VV A++ E   L+ +AP     +
Sbjct: 186 QKGSGVKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPAPLQYIAPYAGCAM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF  KG++ L+I D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEYFMYKGEHALIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++   SVSR
Sbjct: 306 DELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESELFYSGQRPAINVGISVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+   +   + ++ E +     G
Sbjct: 366 VGGSAQIKAMKKVAGGMKLDLAQYRELQAFSQFG 399


>gi|149384583|gb|ABR25114.1| ATP synthase beta chain [Leucostegia pallida]
          Length = 426

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTPQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|149384787|gb|ABR25202.1| ATP synthase beta chain [Thelypteris gemmulifera]
          Length = 426

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLPFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|289423336|ref|ZP_06425144.1| ATP synthase F1, alpha subunit [Peptostreptococcus anaerobius
           653-L]
 gi|289156267|gb|EFD04924.1| ATP synthase F1, alpha subunit [Peptostreptococcus anaerobius
           653-L]
          Length = 498

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 157/335 (46%), Gaps = 11/335 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
            G  + +  ++V    +G   +I  GD+V   GR    P      GRV+NALG+ IDG  
Sbjct: 60  FGMALNLEEEVVGAVILGDDTDIKEGDIVKRTGRIVEVPVGDAMIGRVVNALGQAIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D +  + +  P  M+R+ V +  +TGI+ ID   P+  GQR  V      GK+++
Sbjct: 120 EIA-ADKTRPVEAPAPGIMDRKSVFEPLQTGIKSIDSMIPIGRGQRELVIGDRQTGKTSI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRK 232
           L  ++  + D     I   +G++   V + +   E++    +  ++VV AT+ ES  L+ 
Sbjct: 179 LVDTIINQKDKDVICIYVAIGQKRSTVAQLVSTLEEH--GAMDYTIVVSATASESAPLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I E F   G +VL++ D +++ A + RE++      P    YP  VF    R
Sbjct: 237 LAPYAGAAIGEEFMYNGKHVLIVYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHSR 296

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     +    I  +V SI DG I L   L   G  P 
Sbjct: 297 LLERAAKLSDELGGGSMTALPVIETQAGDVAAYIPTNVISITDGQIYLQPELFYSGIRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VDP  SVSR+   A     KK+  +L     ++ E
Sbjct: 357 VDPGISVSRVGGSAQIKSMKKIAGTLKLAYSQYRE 391


>gi|257852950|gb|ACV71486.1| ATP synthase beta subunit [Triadenum walteri]
          Length = 371

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 137/259 (52%), Gaps = 17/259 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 87

Query: 201 EVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E  +  ++         +N+ +S V  V    +E P  R    LTA+T+AEYF      +
Sbjct: 88  EGNDLYKEMRDSGVINEENIAQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQD 147

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G IT++ 
Sbjct: 148 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQ 205

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S  L  K  S    
Sbjct: 206 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVSDAHY 265

Query: 371 KLVSSLTHLIHRFEETRDI 389
           K    +   + R++E +DI
Sbjct: 266 KTAQRVKETLQRYKELQDI 284


>gi|169260984|gb|ACA52093.1| ATP synthase beta subunit [Cyathea klossii]
          Length = 290

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 146/282 (51%), Gaps = 20/282 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  + S       P PA  +   +   F+TGI+V+D+  P   
Sbjct: 8   GRISNVLGEPVD---NLGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          
Sbjct: 65  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283


>gi|237744082|ref|ZP_04574563.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. 7_1]
 gi|229431311|gb|EEO41523.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. 7_1]
          Length = 500

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVINALG PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPTGDELLGRVINALGDPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-HADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V +  +    LG  +  +++V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLG-CMDYTIIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 391


>gi|149384407|gb|ABR25026.1| ATP synthase beta chain [Asplenium normale]
          Length = 426

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|238899339|ref|YP_002925022.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229467100|gb|ACQ68874.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 513

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 161/345 (46%), Gaps = 24/345 (6%)

Query: 62  VIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
            I +NL+   +  V +G  I L  G  V   GR    P      GR++N LGKPIDG  +
Sbjct: 61  AIALNLERDSVGAVVMGSYIDLTEGMKVQCTGRILSVPVGHGLLGRIVNTLGKPIDGKGT 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L     S  + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK+ L 
Sbjct: 121 LNNQGFS-PVETIAPGVIERQSVDQPLQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   +G++   +   +   E++    L  ++VVVAT+ ES  L+ +
Sbjct: 180 IDTIINQRDSEIKCVYVAIGQKASTIANVVRKLEEH--GALSNTIVVVATASESAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 298 LERAARVNAEYVETFTQGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLES 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 GLFNAGIRPAVNPGISVSRVGGAAQTKVMKKLSGGIRTALAQYRE 402


>gi|20807128|ref|NP_622299.1| F0F1 ATP synthase subunit alpha [Thermoanaerobacter tengcongensis
           MB4]
 gi|254479266|ref|ZP_05092609.1| ATP synthase F1, alpha subunit [Carboxydibrachium pacificum DSM
           12653]
 gi|81590746|sp|Q8RC17|ATPA_THETN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|20515623|gb|AAM23903.1| F0F1-type ATP synthase alpha subunit [Thermoanaerobacter
           tengcongensis MB4]
 gi|214034804|gb|EEB75535.1| ATP synthase F1, alpha subunit [Carboxydibrachium pacificum DSM
           12653]
          Length = 506

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 170/368 (46%), Gaps = 26/368 (7%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
            S  +G V+ +  D V +  +G  E++  GD+V   GR    P      GRV+N LG+PI
Sbjct: 56  ESGVVGMVLNLEEDTVGVVVLGDPEKVKEGDVVKRTGRIMEVPVGKGLLGRVVNPLGEPI 115

Query: 114 DGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           DG     KG +  E    I S  PP + RQ V    +TGI  ID   P+  GQR  +   
Sbjct: 116 DG-----KGPIEYEGKRPIESPAPPIVRRQPVNTPLQTGILAIDSMIPIGRGQRELIIGD 170

Query: 170 SGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATS 224
              GK+ +   ++  + D     I   +G++   V   +   E Y    ++ + VV AT+
Sbjct: 171 RQTGKTAIAVDTIINQKDKGVYCIYVAIGQKASTVASVVNTLEKY--GAMEYTTVVAATA 228

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            ES  L+ +AP     + E+F  +G +VL++ D +++ A + R ++      P    YP 
Sbjct: 229 SESAALQYIAPYAGCAMGEHFMYQGKDVLVVYDDLSKHAVAYRTLSLLLRRPPGREAYPG 288

Query: 285 SVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L
Sbjct: 289 DVFYLHSRLLERSARLSDEYGGGSLTALPIVETQAGDISAYIPTNVISITDGQIYLESEL 348

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     KK+   L   + ++   R++++    R G D  
Sbjct: 349 FYSGIRPAINVGLSVSRVGGAAQIKAMKKVAGRLRLELSQY---RELQVFA--RFGTD-- 401

Query: 403 LDKAVHQV 410
           LDKA  +V
Sbjct: 402 LDKATLEV 409


>gi|329923654|ref|ZP_08279079.1| ATP synthase F1, alpha subunit [Paenibacillus sp. HGF5]
 gi|328941131|gb|EGG37431.1| ATP synthase F1, alpha subunit [Paenibacillus sp. HGF5]
          Length = 507

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 155/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EI  GD V   GR    P      GRV+N LG+P+DG   + +   
Sbjct: 73  NVGVVILGPY---SEIKEGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLDGKGPI-EATA 128

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
              + S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 129 FRPVESSAPGVIDRKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTTVAIDTILN 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           +     K I   +G++   V + +E       L+ ++VV A++ E   L+ +AP     +
Sbjct: 189 QKGSGVKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPAPLQYIAPYAGCAM 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF  KG++ L+I D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 249 GEYFMYKGEHALIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 308

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++   SVSR
Sbjct: 309 DELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESELFYSGQRPAINVGISVSR 368

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+   +   + ++ E +     G
Sbjct: 369 VGGSAQIKAMKKVAGGMKLDLAQYRELQAFSQFG 402


>gi|149384713|gb|ABR25165.1| ATP synthase beta chain [Pecluma eurybasis]
          Length = 426

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 153/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+  ++      A++     V   +  ER RE  +   +     + 
Sbjct: 96  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEKDISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDFNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 273 TTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|110348943|gb|ABG73043.1| ATP synthase beta chain [Marsilea capensis]
          Length = 383

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 97  GNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 215 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 273

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 274 ETAQGVKQTLQRYKELQDIIAILG 297


>gi|112361349|gb|ABI15720.1| putative ATP synthase F1 alpha subunit [Pseudomonas veronii]
          Length = 515

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 162/332 (48%), Gaps = 11/332 (3%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGD-DS 118
           I  NLD   +  V +G+   L  G  V   GR   ++      GRVI+ LG+ +DG    
Sbjct: 70  IAFNLDEEGVDVVLLGDSAHLRAGQEVRRTGRVMDVAVGDGLLGRVIDPLGRALDGGAQP 129

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +  L +E      P M+R  V +  +TG++VID   P+  GQR  +      GK+ + 
Sbjct: 130 VTRSRLPIE--RPAAPIMDRAPVTEPLQTGLKVIDALIPIGRGQRELILGDRQTGKTAIA 187

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
             ++F + D     +   +G+R   V + + +      L  +VVVVA  +E+P L  +AP
Sbjct: 188 IDAIFNQRDKNVLCVYCAIGQRASAVAKAVANLRERGALAYTVVVVAEGNEAPGLSYIAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A +IAE+F   G +VL++ D +T  A + RE++      P    +P  +F    R+LE
Sbjct: 248 YAATSIAEHFMEAGRDVLVVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRMLE 307

Query: 296 RIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +E+  G++TA+  +  +  N +  I  ++ SI DG IVL+ SL E G  P +D 
Sbjct: 308 RATHLSQERGGGSMTALPIIETEAQNISAYIPTNLISITDGQIVLSPSLFELGVLPAIDV 367

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+  KA     + +   L     +FEE
Sbjct: 368 GRSVSRVGGKAQRPAYRAVAGDLKLAYAQFEE 399


>gi|109947167|ref|YP_664395.1| F0F1 ATP synthase subunit alpha [Helicobacter acinonychis str.
           Sheeba]
 gi|123173495|sp|Q17Y80|ATPA_HELAH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|109714388|emb|CAJ99396.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis str.
           Sheeba]
          Length = 503

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 171/364 (46%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVVV A++ +S  ++ +AP   V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVVNASASDSAAMQYLAPYAGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 VCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|21264380|sp|O03079|ATPB_PTEAQ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
          Length = 495

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  P
Sbjct: 105 TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +
Sbjct: 222 INEENISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNILRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +     R+
Sbjct: 340 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|301353356|ref|YP_003795587.1| ATP synthase CF1 beta subunit [Pteridium aquilinum subsp.
           aquilinum]
 gi|301016274|gb|ADK47561.1| ATP synthase CF1 beta subunit [Pteridium aquilinum subsp.
           aquilinum]
          Length = 493

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 105 LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 161

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKVIN 221

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  
Sbjct: 222 EENISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNILRFVQAGS 281

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 339

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +     R++E
Sbjct: 340 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTSQRYKE 398

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 399 LQDIIAILG 407


>gi|224830556|gb|ACN66373.1| ATP synthase beta chain [Pachygone ovata]
          Length = 376

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 141/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 332 APATTFAHLDXTTVLSRGLAAKGIYPAVDPLDSTSTM 368


>gi|49182432|gb|AAT57695.1| ATP synthase beta chain [Metzgeria sp. Davis 361]
          Length = 369

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAILG 295


>gi|322513165|ref|ZP_08066296.1| ATP synthase F1 sector alpha subunit [Actinobacillus ureae ATCC
           25976]
 gi|322121061|gb|EFX92885.1| ATP synthase F1 sector alpha subunit [Actinobacillus ureae ATCC
           25976]
          Length = 513

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIDNDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++ A+ D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEH--SA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|295397777|ref|ZP_06807846.1| V-type sodium ATPase [Aerococcus viridans ATCC 11563]
 gi|294973989|gb|EFG49747.1| V-type sodium ATPase [Aerococcus viridans ATCC 11563]
          Length = 473

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 159/325 (48%), Gaps = 28/325 (8%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKP 112
           N + LGQ+I +  +   I        +SL +  + F      I  +    GRV + +G+P
Sbjct: 37  NEEKLGQIITMEGEKAIIQVFDSTTSMSLDNTHIQFTGHGLEIELAPEIQGRVFDGIGRP 96

Query: 113 IDGDDSLGKG---DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           ID    +  G   D++   ++ V     R  +E GF      ID    L  GQ++ +F+G
Sbjct: 97  IDNLGPIHSGIKRDVNGAPLNPVSRVYPRDYIETGFS----AIDGLMTLIRGQKLPIFSG 152

Query: 170 SGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKS----- 217
            G+  + + +   +       SD    V+ + +G     V+  I DY   + ++S     
Sbjct: 153 DGMSHNQVAAQIVKQAKLGEDSDEEFAVVFAAMG-----VKHDIADYFRRSFEESGAMDH 207

Query: 218 -VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275
             + V T+D+  + R + P  A+T AEY +   G +VL+IL  +T FA ++RE+++   E
Sbjct: 208 VTMFVNTADDPVMERLITPRVALTTAEYLAYDLGKHVLVILTDMTSFAEALREVSSAKQE 267

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P  +GYP  ++SEL  + ER G  + + G++T +  + +  D+   PI D    I +G 
Sbjct: 268 IPSRKGYPGYLYSELATIYERAGIVKGKPGSVTQIPILTMPNDDITHPIPDLTGYITEGQ 327

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL 360
           IVL+R +  +  YPPV  L S+SRL
Sbjct: 328 IVLDRVIEGKNVYPPVGILPSLSRL 352


>gi|42558382|gb|AAS19900.1| ATP synthase beta chain [Micropolypodium taenifolium]
          Length = 422

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S +  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVRTSAISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 131 RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 189

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 190 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 249

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 250 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 307

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 308 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 366

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 367 ELQDIIAILG 376


>gi|5758860|gb|AAD50834.1| ATP synthase beta subunit [Canna indica]
          Length = 496

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               G   N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGPNFNVLGEPVD---NLGPVDTXTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|328681643|gb|AEB32894.1| ATP synthase beta subunit [Telaranea quadriseta]
          Length = 363

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 28  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 87

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 88  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 147

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 148 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 205

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 206 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 264

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 265 ETAQGVKQTLQRYKELQDIIAILG 288


>gi|312369865|gb|ADQ74312.1| ATP synthase CF1 beta subunit [Jaborosa squarrosa]
          Length = 363

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKK 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S  L  +    D  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|149384431|gb|ABR25038.1| ATP synthase beta chain [Asplenium trichomanes]
          Length = 426

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|164708510|gb|ABO43930.2| ATP synthase beta subunit [Protea cynaroides]
          Length = 487

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 138 FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 197

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 198 GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 257

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 258 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 315

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 316 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 375

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
           +   +   + R++E +DI  I G
Sbjct: 376 IAQRVKQTLQRYKELQDIIAILG 398


>gi|14424441|gb|AAB51743.3| ATP synthase beta chain [Pteridium aquilinum]
          Length = 479

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 91  LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 147

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 148 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKVIN 207

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  
Sbjct: 208 EENISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNILRFVQAGS 267

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 268 EVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 325

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +     R++E
Sbjct: 326 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTSQRYKE 384

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 385 LQDIIAILG 393


>gi|149798651|gb|ABR32016.1| ATP synthase beta chain [Adiantum tetraphyllum]
          Length = 385

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 26/312 (8%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 58  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQN 117

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVS 177

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 178 ALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 235

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQD 294

Query: 389 IRLIGGYRPGVD 400
           I  I    PG+D
Sbjct: 295 IIAI----PGLD 302


>gi|119350555|gb|ABL63228.1| AtpB [Tetraselmis chuii]
          Length = 392

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 156/310 (50%), Gaps = 26/310 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  D +  + I    P  ++       F+TGI+V+D+  P   
Sbjct: 39  GRIFNVLGQPVD---NLGPVDSTDGLTIHRTAPAFVDLDTKLAIFETGIKVVDLLAPYRR 95

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220
           G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V+
Sbjct: 96  GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVXGGVGERTREGNDLYM--EMKESGVI 153

Query: 221 VATSDESPILRKMAP-------------LTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             ++                        LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 154 KESNXXXXXXXXXXXXXXXXXXXXXXXXLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 213

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   
Sbjct: 214 AEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 271

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+      ++   + R++
Sbjct: 272 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEEHYSCAQNVKQTLQRYK 330

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 331 ELQDIIAILG 340


>gi|18075724|emb|CAD11280.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLVLRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|85858475|ref|YP_460677.1| F0F1 ATP synthase subunit alpha [Syntrophus aciditrophicus SB]
 gi|124007204|sp|Q2LQZ7|ATPA1_SYNAS RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|85721566|gb|ABC76509.1| ATP synthase alpha chain [Syntrophus aciditrophicus SB]
          Length = 504

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G V+ +  D V +  +G    I  GD+V   G+  +I       GRVI+A G+PIDG  
Sbjct: 61  MGMVLNLEADNVGVAVLGDVTHIKEGDIVKRTGKIAQIPVGEALLGRVIDATGEPIDGKG 120

Query: 118 SLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            LG  + S +E+++  P  + RQ V +   TG++ ID  TP+  GQR  +     IGK+ 
Sbjct: 121 PLGATEFSRIEMIA--PGVIKRQPVNEPMYTGLKAIDAMTPIGRGQRELIIGDRQIGKTA 178

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           +   ++  + D   K I   +G++   V + +E+    D +  + VV   + +   L+ +
Sbjct: 179 IGIDAIIRQKDTGVKCIYVAIGQKKSTVSQIVENLRKHDAMSYTCVVAGCASDPATLQYI 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A     +I EYF  +G + L+I D +++ A + R+I+      P    YP  +F    RL
Sbjct: 239 AAYAGCSIGEYFRDRGQDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDIFYNHSRL 298

Query: 294 LERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     ++   G++TA+  +     + +  I  +V SI DG + L  SL   G  P +
Sbjct: 299 LERSARVSADLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPSLFFSGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++  +L   + ++ E
Sbjct: 359 NVGLSVSRVGGAAQVKAMKQVAGTLKLDLAQYRE 392


>gi|14718060|gb|AAK72771.1| ATP synthase beta subunit [Galphimia gracilis]
          Length = 373

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 32  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 91

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 92  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 151

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 152 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 209

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 210 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYE 269

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 270 TAQRVKQTLQRYKELQDIIAILG 292


>gi|323388517|gb|ADX60544.1| ATP synthase beta subunit [Guioa semiglauca]
          Length = 322

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 15  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 74

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 75  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 134

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 135 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 192

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 193 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 252

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 253 TAQRVKQTLQRYKELQDIIAILG 275


>gi|149798699|gb|ABR32040.1| ATP synthase beta chain [Llavea cordifolia]
          Length = 426

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINRQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|328681641|gb|AEB32893.1| ATP synthase beta subunit [Telaranea lawesii]
          Length = 377

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 19/294 (6%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 2   DNLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGK 61

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV--VVAT 223
           + L+     +       +S+ G  G   RE  + Y+           N+ +S V  V   
Sbjct: 62  TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQ 121

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 122 MNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 181

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 182 QPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 239

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           A +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 240 AAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 292


>gi|110348963|gb|ABG73053.1| ATP synthase beta chain [Marsilea macropoda]
 gi|110348967|gb|ABG73055.1| ATP synthase beta chain [Marsilea minuta]
 gi|110348977|gb|ABG73060.1| ATP synthase beta chain [Marsilea nashii]
 gi|110348987|gb|ABG73065.1| ATP synthase beta chain [Marsilea quadrifolia]
 gi|110348989|gb|ABG73066.1| ATP synthase beta chain [Marsilea schelpeana]
          Length = 383

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 97  GNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 215 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 273

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 274 ETAQGVKQTLQRYKELQDIIAILG 297


>gi|257852936|gb|ACV71479.1| ATP synthase beta subunit [Garcinia latissima]
          Length = 372

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 88

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 89  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYE 266

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 267 TAQRVKQTLQRYKELQDIIAILG 289


>gi|255556745|ref|XP_002519406.1| ATP synthase beta subunit, putative [Ricinus communis]
 gi|223541473|gb|EEF43023.1| ATP synthase beta subunit, putative [Ricinus communis]
          Length = 424

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 158/321 (49%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D    LG  D   +  I    P  +        F+TG
Sbjct: 96  GPLSVPVGGATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETG 152

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I+V+D+  P   G +I +F G+G+GK+ L+     +       +S+ G  G   RE  + 
Sbjct: 153 IKVVDLLAPYRRGGKIRLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 212

Query: 209 YLGDNLKKSVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLL 254
           Y+   +KKS V+    +A S         +E    R    LTA+T+A+YF    + +VLL
Sbjct: 213 YM--EMKKSGVINEENIAESKVALVYGQMNEPSGARMRVGLTALTMAKYFRDVNEQDVLL 270

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V 
Sbjct: 271 FIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVY 328

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373
           V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +  
Sbjct: 329 VPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETA 388

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 389 QRVKQTLQRYKELQDIIAILG 409


>gi|149193993|ref|ZP_01871091.1| F0F1 ATP synthase subunit alpha [Caminibacter mediatlanticus TB-2]
 gi|149135946|gb|EDM24424.1| F0F1 ATP synthase subunit alpha [Caminibacter mediatlanticus TB-2]
          Length = 501

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 159/334 (47%), Gaps = 11/334 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G V  +  D V +  +G G +I  G  V   GR    P      GRV+NALG+PIDG   
Sbjct: 58  GLVFNLETDNVGVVVLGKGTDIVEGSTVKRLGRLISVPVGEALIGRVVNALGEPIDGKGE 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           +   +    +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 118 IEATEYRY-VEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVA 176

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
           +         D + I + +G++   V   +   E++    +  ++VV A++ E+  L+ +
Sbjct: 177 IDTILNQKGQDVICIYVAIGQKQSTVANIVRILEEH--GAMDYTIVVNASASEAASLKFL 234

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + VT+ EYF   G + L++ D +++ A + RE++      P    YP  VF    RL
Sbjct: 235 APYSGVTMGEYFRDNGRHALIVYDDLSKHADAYREMSLLLRRPPGREAYPGDVFYLHSRL 294

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      +   G++TA+  +   G +    I  +V SI DG I L  +L  +G  P +
Sbjct: 295 LERAAKLNDKLGAGSLTALPIIETKGGDVAAYIPTNVISITDGQIFLETNLFNKGIRPAI 354

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++  +L   + ++ E
Sbjct: 355 NVGLSVSRVGGAAQIKAMKQVAGTLRLELAQYRE 388


>gi|110348981|gb|ABG73062.1| ATP synthase beta chain [Marsilea nubica var. gymnocarpa]
          Length = 370

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 24  FETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTRE 83

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 84  GNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 143

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 144 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 201

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 202 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 260

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 261 ETAQGVKQTLQRYKELQDIIAILG 284


>gi|157964053|ref|YP_001504087.1| F0F1 ATP synthase subunit alpha [Shewanella pealeana ATCC 700345]
 gi|189081318|sp|A8HAG5|ATPA_SHEPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157849053|gb|ABV89552.1| ATP synthase F1, alpha subunit [Shewanella pealeana ATCC 700345]
          Length = 513

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   +L  GD V   GR    P      GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAVVMGPYATLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + R+ V++  +TG + +D   P+  GQR  +     IGK+ L 
Sbjct: 122 DSDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   VG++   +   +   E++    L  ++VVVAT+ E+  L+ +
Sbjct: 180 IDAIINQKDSGIKCVYVAVGQKASTIANVVRKLEEH--GALANTIVVVATASEAAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYSGCTMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|15645748|ref|NP_207925.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori 26695]
 gi|210135293|ref|YP_002301732.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori P12]
 gi|217034725|ref|ZP_03440126.1| hypothetical protein HP9810_3g10 [Helicobacter pylori 98-10]
 gi|2493018|sp|P55987|ATPA_HELPY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739893|sp|B6JMX4|ATPA_HELP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|2314285|gb|AAD08176.1| ATP synthase F1, subunit alpha (atpA) [Helicobacter pylori 26695]
 gi|210133261|gb|ACJ08252.1| ATP synthase F1 subunit alpha [Helicobacter pylori P12]
 gi|216942808|gb|EEC22307.1| hypothetical protein HP9810_3g10 [Helicobacter pylori 98-10]
 gi|297380312|gb|ADI35199.1| ATP synthase F1, alpha subunit [Helicobacter pylori v225d]
 gi|308062410|gb|ADO04298.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Cuz20]
 gi|317178564|dbj|BAJ56352.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F30]
 gi|317180866|dbj|BAJ58652.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F32]
          Length = 503

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|315587022|gb|ADU41403.1| ATP synthase F1 sector alpha subunit [Helicobacter pylori 35A]
          Length = 503

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTRSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|156069295|gb|ABU44851.1| ATP synthase beta subunit [Cyrtomidictyum conjunctum]
 gi|156739718|gb|ABU93512.1| ATP synthase beta subunit [Cyrtomidictyum basipinnatum]
 gi|156739720|gb|ABU93513.1| ATP synthase beta subunit [Cyrtomidictyum faberi]
          Length = 394

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 210 AGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQR 326

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 327 YKELQDIIAILG 338


>gi|290745875|gb|ADD51606.1| ATP synthase beta chain [Melpomene sp. ML-2008c]
          Length = 391

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 158/312 (50%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 43  LGRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 97

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE      E  E  
Sbjct: 98  YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 156

Query: 210 L--GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +    N+ +S V +     +E P  R     TA+T+AEYF      + LL +D+I RF  
Sbjct: 157 VINEQNISESKVALXYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDXLLFIDNIFRFVQ 216

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  Z+G+IT++ +V V  D+  DP 
Sbjct: 217 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTZEGSITSIQAVYVPADDLTDPA 274

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 275 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 333

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 334 YKELQDIIAILG 345


>gi|149384401|gb|ABR25023.1| ATP synthase beta chain [Asplenium marinum]
          Length = 426

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|52788870|gb|AAU87404.1| ATP synthase beta chain [Todea barbara]
          Length = 383

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N  G+P+D   +LG  D S    I    P +         F+TGI+V+D+  P   
Sbjct: 8   GRISNVPGEPVD---NLGPVDTSTTSPIHRSAPASTQLDTKLSIFETGIKVVDLSAPYRR 64

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+  +    +  A++     V   +  ER RE  +   +     +  
Sbjct: 65  GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 123

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL R LA +G YP VDPL S   +  + W   E+  +    +   + R++E
Sbjct: 242 TFAHLDATTVLPRGLAAKGIYPAVDPLDSTPTML-QPWIVGEEHYETAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 PQDIIAILG 309


>gi|328681581|gb|AEB32863.1| ATP synthase beta subunit [Telaranea maorensis]
          Length = 345

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G GK+ L+     +       +S+ G  G   RE
Sbjct: 11  FETGIKVVDLLAPYRRGGKIGLFGGAGXGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 70

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 71  GNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 130

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 131 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 188

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 189 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 247

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 248 ETAQGVKQTLQRYKEXQDIIAILG 271


>gi|261839865|gb|ACX99630.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori 52]
 gi|317012911|gb|ADU83519.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Lithuania75]
          Length = 503

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|14718003|gb|AAK72743.1| ATP synthase beta subunit [Chrysobalanus icaco]
          Length = 370

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 32  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 91

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 92  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 151

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 152 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 209

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 210 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYE 269

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 270 TAQRVKQTLQRYKELQDIIAILG 292


>gi|327399152|ref|YP_004340021.1| ATP synthase subunit alpha [Hippea maritima DSM 10411]
 gi|327181781|gb|AEA33962.1| ATP synthase subunit alpha [Hippea maritima DSM 10411]
          Length = 502

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 171/374 (45%), Gaps = 20/374 (5%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G  + +  D V +  +G  ++I  GD V    R    P      GRV+NALG+PIDG  
Sbjct: 60  IGMALNLEEDNVGVVVLGDDKDIKEGDKVKRTKRISQVPVGKALVGRVVNALGEPIDG-- 117

Query: 118 SLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
              KG +  E    I  K P  + RQ V++  +TGI+ ID   P+  GQR  +     IG
Sbjct: 118 ---KGPIESEHYRRIEVKAPGIVQRQSVKEPLQTGIKAIDAMIPIGRGQRELIIGDRQIG 174

Query: 174 KS--TLLSMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPI 229
           K+   L ++  + D     I   VG++   V    +  + +G     ++V    SD +P 
Sbjct: 175 KTQIALDTIINQKDTDVYCIYVAVGQKRSTVARIWKKLEEMGAMEYTTIVAATASDPAP- 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP   V + EYF   G + L+I D +T+ A + R+++      P    YP  VF  
Sbjct: 234 LQYIAPYAGVAMGEYFRDNGMHALIIYDDLTKHAQAYRQVSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G 
Sbjct: 294 HSRLLERAAKLSDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEGDLFYGGI 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P V+   SVSR+   A     K++   L   + ++   R++     +   +D +  + +
Sbjct: 354 RPAVNAGISVSRVGGAAQIKAMKQVAGMLRLALAQY---RELAAFAQFGSDLDKVTQQQL 410

Query: 408 HQVPIIYDFLKQSP 421
           ++   + + LKQ P
Sbjct: 411 NRGARLTEILKQPP 424


>gi|227501703|ref|ZP_03931752.1| F0F1 ATP synthase subunit alpha [Corynebacterium accolens ATCC
           49725]
 gi|227077728|gb|EEI15691.1| F0F1 ATP synthase subunit alpha [Corynebacterium accolens ATCC
           49725]
          Length = 557

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 177/377 (46%), Gaps = 28/377 (7%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   I  V +G  E +  GD V   G    I     + GRVIN LG+PIDG   LG  
Sbjct: 79  NLDTNSIGVVVLGNYESLKEGDEVKRTGEVLSIPVGEDFLGRVINPLGQPIDG---LGPI 135

Query: 123 DLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS----- 175
           +   E  +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK+     
Sbjct: 136 ESEEERVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVTID 195

Query: 176 TLLSMFARSDCFDK-----VIISLVGERGR---EVREFIEDYLGDNLKKSVVVVATSDES 227
           T+L+  A  +  DK      I   +G++G     VR  +E++    L  + +V A + +S
Sbjct: 196 TILNQKANWESGDKDKQVRCIYVAIGQKGSTIASVRRTLEEH--GALDYTTIVAAPASDS 253

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
              + +AP +   + + +  +G++VL+I D +T+ A + R I+     LP    YP  VF
Sbjct: 254 AGYKWLAPFSGAALGQQWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRLPGREAYPGDVF 313

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +
Sbjct: 314 YLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQ 373

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D     
Sbjct: 374 GVRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLAAY---RDLQAFAAFASDLDAASKA 430

Query: 406 AVHQVPIIYDFLKQSPS 422
            + +   + + LKQS S
Sbjct: 431 QLERGSRLVELLKQSES 447


>gi|317177884|dbj|BAJ55673.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F16]
 gi|317182387|dbj|BAJ60171.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F57]
          Length = 503

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|317009746|gb|ADU80326.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori India7]
          Length = 503

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|254779685|ref|YP_003057791.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori B38]
 gi|254001597|emb|CAX29668.1| ATP synthase F1, subunit alpha [Helicobacter pylori B38]
          Length = 503

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|237783985|gb|ACR19789.1| ATP synthase CF1 beta subunit [Solanum pennellii]
 gi|237783987|gb|ACR19790.1| ATP synthase CF1 beta subunit [Solanum chilense]
          Length = 363

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYL---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|323388515|gb|ADX60543.1| ATP synthase beta subunit [Ganophyllum falcatum]
          Length = 329

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 22  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 81

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 82  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 141

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 142 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 199

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 200 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 259

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 260 TAQGVKQTLQRYKELQDIIAILG 282


>gi|312285279|gb|ADQ64381.1| ATP synthase beta subunit [Tinomiscium petiolare]
          Length = 469

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A  Y  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVSYQPTLSTEMGSWQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R+
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRY 376

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 377 KELQDIIAILG 387


>gi|52788868|gb|AAU87403.1| ATP synthase beta chain [Thelypteris palustris]
          Length = 383

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 158/310 (50%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG    S    + +  PA  +   +    +TGI+V+D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L++      A++     V   +  ER RE      E  E  + 
Sbjct: 64  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 122

Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           D  N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 123 DEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 241 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 300 ELQDIIAILG 309


>gi|322379699|ref|ZP_08054012.1| F0F1 ATP synthase subunit alpha [Helicobacter suis HS5]
 gi|321147848|gb|EFX42435.1| F0F1 ATP synthase subunit alpha [Helicobacter suis HS5]
          Length = 503

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 159/329 (48%), Gaps = 13/329 (3%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRVIN LG+PIDG   +     S  +  K P  M+R+ V +  +TGI+VID   P+ 
Sbjct: 103 AVVGRVINTLGEPIDGRGPIEANAFSF-VEQKAPGIMDRKSVHEPLQTGIKVIDALVPIG 161

Query: 160 HGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNL 214
            GQR  +      GK+T+   ++  + D     I   +G++   V + +   E+Y    +
Sbjct: 162 RGQRELIIGDKQTGKTTVAIDAIINQKDQNVICIYVAIGQKESTVAQVVHKLEEY--GAM 219

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + SVV+ A +  SP ++ +AP   VTI E+F  +G + L++ D +++ A + REI+    
Sbjct: 220 EYSVVINAPASASPAMQYLAPYAGVTIGEHFRDQGRHALIVYDDLSKHAVAYREISLILR 279

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +K  G++TA+  +     + +  I  +V SI 
Sbjct: 280 RPPGREAFPGDVFYIHSRLLERAAKMSDKKGAGSLTALPIIETQAGDVSAYIPTNVISIT 339

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I L   L   G  P ++   SVSR+   A     K++  +L   + ++   R+++  
Sbjct: 340 DGQIFLETDLFYSGIRPAINVGLSVSRVGGAAQIKGTKQVAGTLRLDLAQY---RELQAF 396

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             +   +D    K + +   + + LKQ P
Sbjct: 397 AQFASDLDEASRKQLERGQRMVEVLKQPP 425


>gi|156739800|gb|ABU93553.1| ATP synthase beta subunit [Ctenitis decurrentipinnata]
          Length = 389

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 29  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+  G+G+GK+ L++      A++     V   +  ER RE      E  E  
Sbjct: 86  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 144

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T+AEYF      +VLL++D+I RF  
Sbjct: 145 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLLIDNIFRFVQ 204

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 205 AGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 262

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 263 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 321

Query: 383 FEETRDIRLIGG 394
           ++E  DI  I G
Sbjct: 322 YKELPDIIAILG 333


>gi|156739688|gb|ABU93497.1| ATP synthase beta subunit [Polystichum craspedosorum]
          Length = 394

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|149384851|gb|ABR25234.1| ATP synthase beta chain [Allantodia dilatata]
          Length = 426

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  +   +  I    P           F+TGI+V D   P
Sbjct: 37  TTLGRIFNALGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVADPLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD    L+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTALSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|227510135|ref|ZP_03940184.1| F0F1 ATP synthase subunit alpha [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190340|gb|EEI70407.1| F0F1 ATP synthase subunit alpha [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 522

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 157/342 (45%), Gaps = 9/342 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
            G V  +  + V I  +G    I  GD V   GR    P      GRV+N+LG+PIDG  
Sbjct: 60  FGMVQNLEANDVGIMVLGDDTNIREGDSVKRTGRIMEVPVGDDMIGRVVNSLGQPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K D    I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++
Sbjct: 120 PI-KADDHKAIEHKAPGVMDRKSVFEPLQTGIKSIDSLIPIGRGQRELIIGDRKTGKTSI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKM 233
              ++  + D   K I   +G++   VR  +   +  G  +  + V+ A   E   L  +
Sbjct: 179 AIDTILNQKDQNMKCIYVAIGQKESTVRASVSTLEKFG-AMDYTTVISAGPSEPASLLYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  KG +VL+I D +++ A++ RE++      P    YP  +F    RL
Sbjct: 238 APYAGATMGEYFMHKGQHVLIIYDDLSKQANAYRELSLILRRPPGREAYPGDIFYTHSRL 297

Query: 294 LERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER    S+K   G++TA+  V     + +  I  +V SI DG I L+      G  P V
Sbjct: 298 LERAAKLSDKLGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAV 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           D   SVSR+   A     KK+  +L   +  + E       G
Sbjct: 358 DAGTSVSRVGGDAQVKAMKKVAGTLRLDLASYHELESFAQFG 399


>gi|217032679|ref|ZP_03438165.1| hypothetical protein HPB128_202g13 [Helicobacter pylori B128]
 gi|298735863|ref|YP_003728388.1| F-type H+-transporting ATPase alpha chain [Helicobacter pylori B8]
 gi|216945609|gb|EEC24260.1| hypothetical protein HPB128_202g13 [Helicobacter pylori B128]
 gi|298355052|emb|CBI65924.1| F-type H+-transporting ATPase alpha chain [Helicobacter pylori B8]
          Length = 503

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|157272365|gb|ABV27009.1| ATP synthase beta chain [Azolla mexicana]
          Length = 381

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LPFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEK 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   A+  
Sbjct: 213 VYVPADDSTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHY 271

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 272 ETAQGVKQTLQRYKELQDIIAILG 295


>gi|149384379|gb|ABR25012.1| ATP synthase beta chain [Asplenium abscissum]
          Length = 426

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 151/303 (49%), Gaps = 22/303 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 40  GRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 97  GGKIGLSGGAGVGKTALITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKDSKVINE 156

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E
Sbjct: 157 QNISESKVAPVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 217 VSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E 
Sbjct: 275 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKEL 333

Query: 387 RDI 389
           +DI
Sbjct: 334 QDI 336


>gi|110348941|gb|ABG73042.1| ATP synthase beta chain [Marsilea botryocarpa]
          Length = 374

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 28  FETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTRE 87

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 88  GNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 147

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 148 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 205

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 206 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 264

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 265 ETAQGVKQTLQRYKELQDIIAILG 288


>gi|7578497|gb|AAF64071.1|AF132889_1 ATP synthase, B subunit [Alnus rubra]
          Length = 335

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +L   D      I    P  +        F+TGI+V+D+  
Sbjct: 23  GATLGRIFNVLGEPVD---NLVPXDTRTXSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 79

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 80  PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 139

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 140 VINEQNIAESKVALVYGQMNEPPGARMXXGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 199

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 200 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPA 257

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP  DPL S S +       +E  +    +   + R+
Sbjct: 258 PATTFAHLDATTVLSRRLAAKGIYPAXDPLDSTSTMLQPRIVGEEHYETAQRVXQTLXRY 317

Query: 384 EETRDIRLIGG 394
           +E  DI  I G
Sbjct: 318 KELXDIIAILG 328


>gi|14718232|gb|AAK72854.1| ATP synthase beta subunit [Stellaria media]
          Length = 373

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 32  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 91

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 92  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDV 151

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 152 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 209

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 210 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 269

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
           +   +   + R++E +DI  I G
Sbjct: 270 IAQRVKQTLQRYKELQDIIAILG 292


>gi|262066571|ref|ZP_06026183.1| ATP synthase F1, alpha subunit [Fusobacterium periodonticum ATCC
           33693]
 gi|291379706|gb|EFE87224.1| ATP synthase F1, alpha subunit [Fusobacterium periodonticum ATCC
           33693]
          Length = 500

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRV+N+LG+PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGDNLLGRVVNSLGEPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-IADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V + I   L D   ++ + +V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQNVKCIYVAIGQKRSTVAQ-IYKKLSDLGCMEYTTIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 391


>gi|156739780|gb|ABU93543.1| ATP synthase beta subunit [Acrophorus stipellatus]
          Length = 394

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  ATLGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|328681659|gb|AEB32902.1| ATP synthase beta subunit [Telaranea tetrapila]
          Length = 358

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 141/265 (53%), Gaps = 19/265 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 16  FETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 74

Query: 201 E----VREFIEDYLGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E      E  E  + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +
Sbjct: 75  EGNDLYMEMKESKVIDEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQD 134

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ 
Sbjct: 135 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQ 192

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+ 
Sbjct: 193 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEH 251

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 252 YETAQGVKQTLQRYKELQDIIAILG 276


>gi|255281449|ref|ZP_05346004.1| ATP synthase F1, alpha subunit [Bryantella formatexigens DSM 14469]
 gi|255267937|gb|EET61142.1| ATP synthase F1, alpha subunit [Bryantella formatexigens DSM 14469]
          Length = 591

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 174/376 (46%), Gaps = 21/376 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            +GG+I  +      V  +SQ V  G+ V+ +       G V  I+   V    +G  +E
Sbjct: 112 TEGGHILRLHDGIAAVDGMSQAV-YGEIVLFENGTK---GLVQNIDETEVLCIVLGDEQE 167

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  GD V   G R  I       GRV++ALG PIDG     + D  + I  K P  + RQ
Sbjct: 168 LEEGDRVIRTGKRAGIPVGKEILGRVVDALGAPIDGAGPFREEDWYL-IERKAPGVLERQ 226

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGE 197
            V    +TGI  ID   P+  GQR  +      GK+++   ++  + D     +   +G+
Sbjct: 227 PVNVPMQTGILAIDAMFPIGRGQRELIIGDRQTGKTSIAIDTIINQKDKDVICVYVAIGQ 286

Query: 198 RGREVREFIEDYLGDNLKKS------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +   V + +      NLKK       VVV A++ E   L+ +AP +   IAEYF  +G +
Sbjct: 287 KASTVAQIV-----SNLKKHHAMDYCVVVSASASEPAALQYLAPYSGTAIAEYFMDQGKD 341

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITA 309
           VL+I D +++ A + R ++      P    YP  VF    RLLER    ++    G+ITA
Sbjct: 342 VLIIYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRMDEAHGGGSITA 401

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  V   G + +  I  ++ SI DG I L   L   G  P V+   SVSR+   A +   
Sbjct: 402 LPIVETQGGDVSAYIPTNIISITDGQIFLESDLFFAGNRPAVNVGLSVSRVGGAAQTKAL 461

Query: 370 KKLVSSLTHLIHRFEE 385
           KK+  +L   + +++E
Sbjct: 462 KKVSGTLRIDLAQYKE 477


>gi|323388523|gb|ADX60547.1| ATP synthase beta subunit [Nephelium lappaceum]
          Length = 329

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 22  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 81

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 82  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 141

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 142 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 199

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 200 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 259

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 260 TAQRVKQTLQRYKELQDIIAILG 282


>gi|149384381|gb|ABR25013.1| ATP synthase beta chain [Asplenium adiantum-nigrum]
          Length = 426

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|237783977|gb|ACR19785.1| ATP synthase CF1 beta subunit [Nolana werdermannii]
          Length = 362

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 20  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 79

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 80  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 139

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 140 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 197

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 198 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 257

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 258 TAQRVKQTLQRYKELQDIIAILG 280


>gi|157678807|dbj|BAF80644.1| ATP synthase subunit beta [Chattonella marina var. ovata]
          Length = 277

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 15/256 (5%)

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIED 208
           +D+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  E+
Sbjct: 1   VDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGSVSVLGGVGERTREGNDLYEE 60

Query: 209 YL------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
                     NL +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I
Sbjct: 61  MKESGVINQSNLPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+
Sbjct: 121 FRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTH 378
             DP   +  + LD   VL+R+LA +G YP VDPL S S +  K+   D       ++  
Sbjct: 179 LTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQKSIVGDLHYATAQAVQK 238

Query: 379 LIHRFEETRDIRLIGG 394
            + R++E +DI  I G
Sbjct: 239 TLQRYKELQDIIAILG 254


>gi|119350487|gb|ABL63194.1| AtpB [Eremosphaera viridis]
          Length = 390

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+ +D   +LG  K + S  I    P  ++       F+TGI+V+D+  P  
Sbjct: 35  LGRIFNVLGEAVD---NLGPVKNEESFPIHRSAPAFVDLDTKLAIFETGIKVVDLLAPYR 91

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 92  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESKV 149

Query: 220 VVATS-DESPILRKMAP------------LTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           +   +  ES +                  LTA+T+AEYF      +VLL +D+I RF  +
Sbjct: 150 INEENFSESKVXXXXXXXXXXXXXXXXXXLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 209

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 210 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKNGSITSIQAVYVPADDLTDPAP 267

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 268 ATTFAHLDATTVLSRVLASKGIYPAVDPLDSTSTML-QPWIVGEEHYNCAQDVKQTLQRY 326

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 327 KELQDIIAILG 337


>gi|33327765|gb|AAQ09246.1| ATP synthase beta subunit [Platanus occidentalis]
          Length = 490

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG         I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGXXXXRTXSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|308063919|gb|ADO05806.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Sat464]
          Length = 503

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|257852938|gb|ACV71480.1| ATP synthase beta subunit [Garcinia macrophylla]
          Length = 377

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 88

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 89  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYE 266

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 267 TAQRVKQTLQRYKELQDIIAILG 289


>gi|237783965|gb|ACR19779.1| ATP synthase CF1 beta subunit [Nolana adansonii]
 gi|237783967|gb|ACR19780.1| ATP synthase CF1 beta subunit [Nolana baccata]
 gi|237783969|gb|ACR19781.1| ATP synthase CF1 beta subunit [Nolana coelestis]
 gi|237783973|gb|ACR19783.1| ATP synthase CF1 beta subunit [Nolana sessiliflora]
 gi|237783975|gb|ACR19784.1| ATP synthase CF1 beta subunit [Nolana tomentella]
 gi|237783993|gb|ACR19793.1| ATP synthase CF1 beta subunit [Atropa belladonna]
 gi|312369833|gb|ADQ74296.1| ATP synthase CF1 beta subunit [Anisodus acutangulus]
 gi|312369835|gb|ADQ74297.1| ATP synthase CF1 beta subunit [Anisodus carniolicoides]
 gi|312369839|gb|ADQ74299.1| ATP synthase CF1 beta subunit [Anisodus tanguticus]
 gi|312369841|gb|ADQ74300.1| ATP synthase CF1 beta subunit [Atropa belladonna]
 gi|312369843|gb|ADQ74301.1| ATP synthase CF1 beta subunit [Atropa komarovii]
 gi|312369845|gb|ADQ74302.1| ATP synthase CF1 beta subunit [Atropanthe sinensis]
 gi|312369849|gb|ADQ74304.1| ATP synthase CF1 beta subunit [Hyoscyamus aureus]
 gi|312369851|gb|ADQ74305.1| ATP synthase CF1 beta subunit [Hyoscyamus albus]
 gi|312369853|gb|ADQ74306.1| ATP synthase CF1 beta subunit [Hyoscyamus albus]
 gi|312369855|gb|ADQ74307.1| ATP synthase CF1 beta subunit [Hyoscyamus muticus]
 gi|312369857|gb|ADQ74308.1| ATP synthase CF1 beta subunit [Hyoscyamus niger]
 gi|312369859|gb|ADQ74309.1| ATP synthase CF1 beta subunit [Hyoscyamus niger]
 gi|312369861|gb|ADQ74310.1| ATP synthase CF1 beta subunit [Hyoscyamus pusillus]
 gi|312369863|gb|ADQ74311.1| ATP synthase CF1 beta subunit [Hyoscyamus turcomanicus]
 gi|312369891|gb|ADQ74325.1| ATP synthase CF1 beta subunit [Physochlaina orientalis]
 gi|312369893|gb|ADQ74326.1| ATP synthase CF1 beta subunit [Physochlaina physaloides]
 gi|312369895|gb|ADQ74327.1| ATP synthase CF1 beta subunit [Physochlaina praealta]
 gi|312369897|gb|ADQ74328.1| ATP synthase CF1 beta subunit [Przewalskia tangutica]
 gi|312369899|gb|ADQ74329.1| ATP synthase CF1 beta subunit [Przewalskia tangutica]
 gi|312369901|gb|ADQ74330.1| ATP synthase CF1 beta subunit [Scopolia carniolica]
 gi|312369903|gb|ADQ74331.1| ATP synthase CF1 beta subunit [Scopolia carniolica]
 gi|312369905|gb|ADQ74332.1| ATP synthase CF1 beta subunit [Scopolia japonica]
          Length = 363

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|310947790|gb|ADP50714.1| ATP synthase beta chain [Adiantum raddianum]
          Length = 370

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 154/308 (50%), Gaps = 26/308 (8%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 295

Query: 393 GGYRPGVD 400
               PG+D
Sbjct: 296 ----PGLD 299


>gi|188527917|ref|YP_001910604.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Shi470]
 gi|226739895|sp|B2UUP2|ATPA_HELPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|188144157|gb|ACD48574.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Shi470]
          Length = 503

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|37545706|gb|AAM97785.1| ATP synthase beta subunit [Stypandra glauca]
          Length = 468

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 152/312 (48%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +V L  D+I RF  
Sbjct: 213 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVXEQDVXLXXDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +          R
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRXKQXXQR 389

Query: 383 FEETRDIRLIGG 394
            +E +DI  I G
Sbjct: 390 XKELQDIIAILG 401


>gi|157777943|gb|ABV70129.1| ATP synthase CF1 alpha chain [Heterosigma akashiwo]
          Length = 503

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 13/333 (3%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE I +  G  V   G+    P    C GR+++ L  PIDG  ++
Sbjct: 65  IALNLENDNVGAVLMGEGIGILEGSSVTATGKIAQIPVGEGCLGRILDPLANPIDGKGAI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-L 178
             G  +  I S  P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++ L
Sbjct: 125 A-GTETRLIESMAPGIISRQSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIAL 183

Query: 179 SMFARSDCFDKVIISL-VGERGREVRE---FIEDYLGDNLKKSVVVVATSDESPILRKMA 234
                    D V + + +G++   V +    +E+   D LK +V+V A ++++  L+ +A
Sbjct: 184 DTIINQKTEDVVCVYVAIGQKASSVAQAVTVLEEK--DALKYTVIVAANANDAATLQYIA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLL
Sbjct: 242 PYTGAAIAEYFMYKGKATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +    G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++
Sbjct: 302 ERAAKLNESMGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAIN 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A     K++  +L   + +F+E
Sbjct: 362 VGISVSRVGSAAQIKAMKQVAGTLKLELAQFDE 394


>gi|149384447|gb|ABR25046.1| ATP synthase beta chain [Salpichlaena volubilis]
          Length = 426

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VL  +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLPFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|42558334|gb|AAS19876.1| ATP synthase beta chain [Ctenopteris rhodocarpa]
          Length = 422

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVYKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|46360693|gb|AAS89128.1| ATP synthase beta subunit [Moerckia blyttii]
          Length = 382

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 155/307 (50%), Gaps = 22/307 (7%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           ++ N LG+P+D   +LG  D      + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 4   KIFNVLGEPVD---NLGPVDTGTTFPIHRSAPAFTQPDTKLSIFETGIKVVDLLAPYRRG 60

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GD 212
            +IG F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           
Sbjct: 61  GKIGSFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 120

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 121 NISESKVAPVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 180

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V    D+  DP   +  
Sbjct: 181 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSTTSIQAVHAPADDLTDPAPATTF 238

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E++
Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKESQ 297

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 298 DIIAILG 304


>gi|328681619|gb|AEB32882.1| ATP synthase beta subunit [Acromastigum adaptatum]
          Length = 378

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 33  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 92

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 93  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 152

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 153 LLFIDNIFRFVQAGSEVSAPLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 210

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 211 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 269

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 270 ETAQGVKQTLQRYKELQDIIAILG 293


>gi|194277429|gb|ACF39380.1| AtpD [Streptomyces sp. FXJ52]
          Length = 256

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 138/252 (54%), Gaps = 9/252 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           G+V N LG+ ++ D++   G+    I  K P     +   + F+TG++VID+ TP   G 
Sbjct: 8   GKVFNTLGEVLNVDETY-DGE-RWPIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 65

Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218
           +IG+F G+G+GK+ L+   ++  ++  D V + + VGER RE  + I++      + K+ 
Sbjct: 66  KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKTA 125

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    DE P  R    L  +T+AEYF   +  +VL  +D+I RF  +  E++T  G +P
Sbjct: 126 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 185

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++  E+  L ERI  +     +IT++ ++ V  D+  DP   +  + LD   V
Sbjct: 186 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 243

Query: 338 LNRSLAEEGRYP 349
           L+R ++E+G YP
Sbjct: 244 LSRPISEKGIYP 255


>gi|325973359|ref|YP_004250423.1| ATP synthase F1 subunit alpha [Mycoplasma suis str. Illinois]
 gi|323651961|gb|ADX98043.1| ATP synthase F1, alpha subunit [Mycoplasma suis str. Illinois]
          Length = 517

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 6/289 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+IN  G+P+DG   +   + S ++ +  P  M R  V +   TGI  ID   P+  G
Sbjct: 106 SGRIINVFGEPLDGKGKIEISEWS-QVEAPAPEVMERSSVCEPLYTGILAIDAIIPIGKG 164

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
           QR  +      GK++L   ++  +     + +   +G++   V +  +D      L  + 
Sbjct: 165 QRELIIGDRQTGKTSLAMEAIVNQKGKNVRCVFVTIGQKNSTVFQSFKDLEKVGALDYTT 224

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           +VVA++ + P L+ +AP   +T+AEY+  +G++VL+I D +T+ A + R ++      P 
Sbjct: 225 IVVASASDLPSLQFLAPFVGITVAEYWMRRGEDVLIIYDDLTQHAIAYRTLSLLLSFPPG 284

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  +F    RLLER G    E   G+ITA+  +    D+ +  I  +V SI DG +
Sbjct: 285 REAFPGDIFYLHSRLLERAGKLSPENGGGSITALPIIQTQSDDISAYIPSNVISITDGQL 344

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L  +L   G+ P VD   SVSR+   A  A  K L  SL   + ++ E
Sbjct: 345 FLKTTLFNSGQRPAVDLSNSVSRVGASAQEAAIKSLTGSLKLAVSQYFE 393


>gi|313112901|ref|ZP_07798547.1| ATP synthase F1, alpha subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624806|gb|EFQ08115.1| ATP synthase F1, alpha subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 506

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 152/325 (46%), Gaps = 11/325 (3%)

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           VGI E    G  V   G+    P      GRV+NALG+PIDG   +   +    I S+ P
Sbjct: 80  VGIKE----GSTVKRTGKVVSVPVGEAMIGRVVNALGQPIDGAGPIETTEFRA-IESRAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFARSDCFDKVII 192
             ++RQ V++  +TGI+ ID   P+  GQR  +      GK+T+ S         D + I
Sbjct: 135 GIIDRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIASDTIINQKGKDVICI 194

Query: 193 SL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G++   V   ++       +  ++VV AT+ E   L+ +AP +   + EYF  +G 
Sbjct: 195 YVAIGQKRSTVANLVQSLTESGAMGYTIVVSATASELSPLQYIAPYSGCAMGEYFMHQGK 254

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           +VL+I D +++ A + R ++      P    YP  VF    RLLER      E   G++T
Sbjct: 255 HVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRLLERAAKLSNELGGGSLT 314

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P V+P  SVSR+   A    
Sbjct: 315 ALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMPAVNPGISVSRVGGNAQIKA 374

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIG 393
            KK+  +L  +  ++ E +     G
Sbjct: 375 MKKVAGTLKLIYSQYRELQSFAQFG 399


>gi|189095369|ref|YP_001936382.1| ATP synthase CF1 alpha subunit [Heterosigma akashiwo]
 gi|157694712|gb|ABV65988.1| ATP synthase CF1 alpha chain [Heterosigma akashiwo]
          Length = 503

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 13/333 (3%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE I +  G  V   G+    P    C GR+++ L  PIDG  ++
Sbjct: 65  IALNLENDNVGAVLMGEGIGILEGSSVTATGKIAQIPVGEGCLGRILDPLANPIDGKGAI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-L 178
             G  +  I S  P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++ L
Sbjct: 125 A-GTETRLIESMAPGIISRQSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIAL 183

Query: 179 SMFARSDCFDKVIISL-VGERGREVRE---FIEDYLGDNLKKSVVVVATSDESPILRKMA 234
                    D V + + +G++   V +    +E+   D LK +V+V A ++++  L+ +A
Sbjct: 184 DTIINQKTEDVVCVYVAIGQKASSVAQAVTVLEEK--DALKYTVIVAANANDAATLQYIA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLL
Sbjct: 242 PYTGAAIAEYFMYKGKATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +    G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++
Sbjct: 302 ERAAKLNESMGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAIN 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A     K++  +L   + +F+E
Sbjct: 362 VGISVSRVGSAAQIKAMKQVAGTLKLELAQFDE 394


>gi|46360726|gb|AAS89144.1| ATP synthase beta subunit [Treubia lacunosa]
          Length = 267

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 142/268 (52%), Gaps = 19/268 (7%)

Query: 105 VINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162
           +I  LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G 
Sbjct: 5   IIYVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRRGG 61

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 62  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEEN 121

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           L +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 122 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 181

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 182 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 239

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            LD   VL+R LA +G YP VDPL S S
Sbjct: 240 HLDATTVLSRGLAAKGIYPAVDPLDSTS 267


>gi|158602255|gb|ABW74594.1| ATP synthase beta subunit [Aquilegia vulgaris]
          Length = 491

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 149/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P                 S  P  +  +     F+TGI+V+D+  P 
Sbjct: 97  GATLGRIFNVLGEPXXXXXXXXXXXXXXXXRS-APAFIXXETKLSIFETGIKVVDLLAPY 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 156 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGEXTREGNDLYMEMKESGVI 215

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 216 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 275

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 276 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 333

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E
Sbjct: 334 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQRYKE 393

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 394 LQDIIAILG 402


>gi|237783983|gb|ACR19788.1| ATP synthase CF1 beta subunit [Lycianthes sp. Wen et al. 2111]
 gi|237783995|gb|ACR19794.1| ATP synthase CF1 beta subunit [Withania somnifera]
 gi|237783997|gb|ACR19795.1| ATP synthase CF1 beta subunit [Physalis peruviana]
 gi|237783999|gb|ACR19796.1| ATP synthase CF1 beta subunit [Physalis peruviana]
          Length = 363

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|158602275|gb|ABW74604.1| ATP synthase beta subunit [Helleborus orientalis]
          Length = 474

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 149/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N    P+D          S  I    P  +        F+TGI+V+D+  P 
Sbjct: 80  GATLGRIFNVXXXPVDNXXXXXXXXXS-PIHRSAPAFIQLDTNLSIFETGIKVVDLLAPY 138

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 139 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 198

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 199 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 259 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 316

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 317 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 376

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 377 LQDIIAILG 385


>gi|199597578|ref|ZP_03211007.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus HN001]
 gi|199591601|gb|EDY99678.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus HN001]
          Length = 509

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 156/337 (46%), Gaps = 17/337 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I  +G  +EI  GD V   GR    P      GRV+N+LG+P+DG  +
Sbjct: 61  GMALNLETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGEAMIGRVVNSLGQPVDGLGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +  G  +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+++ 
Sbjct: 121 IKTGK-TRPIEFKAPGVMQRQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSDESPIL 230
             ++  + D     +   +G++   VR  +E      LKK      ++V+ A   E   +
Sbjct: 180 IDTILNQKDQNMICVYVAIGQKDSTVRAQVE-----TLKKYGAMDYTIVLTAGPSEPAPM 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + E F   G +VL++ D +++ A S RE++      P    YP  +F   
Sbjct: 235 LYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 295 SRLLERAAKLSDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P +D  ASVSR+   A     KK+  +L   +  F E
Sbjct: 355 PAIDAGASVSRVGGDAQVKAMKKVAGTLRLDLASFRE 391


>gi|254444200|ref|ZP_05057676.1| ATP synthase F1, beta subunit [Verrucomicrobiae bacterium DG1235]
 gi|198258508|gb|EDY82816.1| ATP synthase F1, beta subunit [Verrucomicrobiae bacterium DG1235]
          Length = 472

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N  G P+D    + K D    I    PP   +       +TGI+VID+  P   G
Sbjct: 90  LGRIFNVTGDPVDNRGEV-KFDKKYPIHRPAPPLTEQDTKATILETGIKVIDLICPFIKG 148

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD----- 212
            ++G F G+G+GK+     L++  A++     V    VGER RE  +   + + D     
Sbjct: 149 GKVGAFGGAGVGKTVVIMELINNIAKTHGGYSVFAG-VGERSREGNDLYHE-MSDSGVID 206

Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267
             NL+ S V  V    +E P  R    L+A+++AEYF   K  +VLL +D++ RF+ +  
Sbjct: 207 QKNLENSKVALVYGQMNEPPGARMRVALSALSMAEYFRDEKNQDVLLFVDNVFRFSQAGS 266

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G  P A GY  ++ SE+  L ERI  +   KG++T+  +V V  D+  DP   +
Sbjct: 267 EVSALLGRSPSAVGYQPTLSSEMGALQERI--TSTTKGSVTSFQAVYVPADDLTDPAPAN 324

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386
             + LD  IVL RS+A+ G YP VDPL+SVS+  + A    E   V+  +  ++ R+++ 
Sbjct: 325 TFAHLDSTIVLERSIADLGIYPAVDPLSSVSKALEPAVVGQEHYDVARGVQRVLQRYKDL 384

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 385 QDIIAILG 392


>gi|18075728|emb|CAD11283.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKERTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|291460683|ref|ZP_06600073.1| ATP synthase F1, alpha subunit [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291416642|gb|EFE90361.1| ATP synthase F1, alpha subunit [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 513

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 9/336 (2%)

Query: 66  NLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122
           NL+   +  V  G ++ +  G      GR    P      GRV+NA+G+PIDG   +   
Sbjct: 65  NLEETSVSAVLFGSDVGIQEGQTAKRTGRVVSVPVGEAMIGRVVNAIGQPIDGAGPIESS 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
           +    + S  P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+T+ +   
Sbjct: 125 EFRA-VESPAPGIIKRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIAIDTI 183

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAV 239
                 D + I + +G++   V   + +      +  S+VV AT+ E   L+ +AP +  
Sbjct: 184 INQKGKDVLCIYVAIGQKRSTVTALVNELKEAGAMDYSIVVAATASEPSPLQYIAPYSGC 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF ++G +VL+I D +++ A + R I+      P    YP  VF    RLLER   
Sbjct: 244 AMGEYFMNQGKHVLIIYDDLSKHAVAYRAISLLIRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P  SV
Sbjct: 304 LSEEMGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMPAVNPGISV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           SR+   A     KK+  +L  +  ++ E +     G
Sbjct: 364 SRVGGNAQIKAMKKVAGTLKLVYSQYRELQSFAQFG 399


>gi|224830586|gb|ACN66388.1| ATP synthase beta chain [Syntriandrium preussii]
          Length = 379

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 98  GATLGRIFNVLGEPVD---NLGPVESRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 214 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 273

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 368


>gi|149384415|gb|ABR25030.1| ATP synthase beta chain [Asplenium pteropus]
          Length = 426

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++         +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSASGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|312369837|gb|ADQ74298.1| ATP synthase CF1 beta subunit [Anisodus luridus]
          Length = 358

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 16  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 75

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 76  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 135

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 136 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 193

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 194 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 253

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 254 TAQRVKQTLQRYKELQDIIAILG 276


>gi|328681683|gb|AEB32914.1| ATP synthase beta subunit [Lepidozia setigera]
          Length = 380

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 141/265 (53%), Gaps = 19/265 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 35  FETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 93

Query: 201 E----VREFIEDYLGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E      E  E  + D  N+ +S V  V    +E P  R    LTA+T+AEYF      +
Sbjct: 94  EGNDLYMEMKESKVIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQD 153

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ 
Sbjct: 154 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQ 211

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+ 
Sbjct: 212 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEH 270

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 271 YETAQGVKQTLQRYKELQDIIAILG 295


>gi|317011332|gb|ADU85079.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori SouthAfrica7]
          Length = 503

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 171/363 (47%), Gaps = 25/363 (6%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKMAPLTAVT 240
           +       I   +G++   V + +   LG+   ++ SVV+ A++ +S  ++ +AP   V 
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRK-LGEYGAMEYSVVINASASDSAAMQYLAPYAGVA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER    
Sbjct: 246 MGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAKV 305

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SVS
Sbjct: 306 CDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++   R+++    +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVLK 422

Query: 419 QSP 421
           Q+P
Sbjct: 423 QAP 425


>gi|149384511|gb|ABR25078.1| ATP synthase beta chain [Dryopteris erythrosora]
          Length = 426

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSNATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|328681651|gb|AEB32898.1| ATP synthase beta subunit [Telaranea martinii]
          Length = 379

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 150/294 (51%), Gaps = 19/294 (6%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G  IG+F G+G+GK
Sbjct: 4   DNLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGXIGLFGGAGVGK 63

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV--VVAT 223
           + L+     +       +S+ G  G   RE  + Y+           N+ +S V  V   
Sbjct: 64  TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQ 123

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 124 MNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 183

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 184 QPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 241

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           A +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 242 AAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 294


>gi|323388503|gb|ADX60537.1| ATP synthase beta subunit [Arytera littoralis]
 gi|323388509|gb|ADX60540.1| ATP synthase beta subunit [Diploglottis campbellii]
          Length = 329

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 22  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 81

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 82  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 141

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 142 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 199

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 200 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 259

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 260 TAQRVKQTLQRYKELQDIIAILG 282


>gi|312984860|gb|ADR30680.1| ATP synthase beta chain [Terpsichore david-smithii]
          Length = 346

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 157/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 31  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 88

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 89  GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 148

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 149 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 208

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 209 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 266

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + L+   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 267 SAHLNATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 325

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 326 QDIIAILG 333


>gi|332673932|gb|AEE70749.1| ATP synthase F1 sector alpha subunit [Helicobacter pylori 83]
          Length = 503

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIRATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|167626201|ref|YP_001676495.1| F0F1 ATP synthase subunit alpha [Shewanella halifaxensis HAW-EB4]
 gi|189081317|sp|B0TQF6|ATPA_SHEHH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167356223|gb|ABZ78836.1| ATP synthase F1, alpha subunit [Shewanella halifaxensis HAW-EB4]
          Length = 513

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 24/344 (6%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   +L  GD V   GR    P      GRV+N LG+PIDG   L
Sbjct: 62  IALNLERDSVGAVVMGPYANLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGPL 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + R+ V++  +TG + +D   P+  GQR  +     IGK+ L 
Sbjct: 122 EHDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKMA 234
             ++  + D   K +   VG++   +   +   D  G  L  ++VVVAT+ E+  L+ +A
Sbjct: 180 IDAIINQKDTGIKCVYVAVGQKASTIANVVRKLDEHG-ALANTIVVVATASEAAALQYLA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 239 PYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER              G  + + G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 299 ERASRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 359 LFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE 402


>gi|149384439|gb|ABR25042.1| ATP synthase beta chain [Blechnum schomburgkii]
          Length = 410

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLSGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVPLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|99640624|emb|CAJ45097.1| putative beta subunit of chloroplast ATP synthase [Plagiogyria
           matsumureana]
          Length = 374

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 149/292 (51%), Gaps = 24/292 (8%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G+GK+ L++    +       +S+ G  G   RE
Sbjct: 28  FETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTRE 87

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V   ++E P  R     TA T+AEYF      +V
Sbjct: 88  GNDLYMETKESKVINEQNISESKVALVYGQTNEPPGARTRVGSTAPTMAEYFRDVNKQDV 147

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+  RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 148 LLFIDNTFRFVQAGSEVSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQA 205

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   E+  
Sbjct: 206 VYVPADDPTDPAPATTFAHLDATTVLSRGSAAKGTYPAVDPLDSTSTML-QPWIVGEEHY 264

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +    +   + R++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 265 ETAQGVKQTLQRYKEPQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 312


>gi|328681699|gb|AEB32922.1| ATP synthase beta subunit [Bazzania intermedia]
          Length = 379

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 152/295 (51%), Gaps = 21/295 (7%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F G+G+GK
Sbjct: 4   DNLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSFGGAGVGK 63

Query: 175 STLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKSVV--VVA 222
           + L+    +  A++     V   +  ER RE      E  E  + D  N+ +S V  V  
Sbjct: 64  TVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISESKVALVYG 122

Query: 223 TSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G +P A G
Sbjct: 123 QMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVG 182

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R 
Sbjct: 183 YQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRG 240

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 241 LAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAISG 294


>gi|904041|gb|AAA84013.1| adenosine triphosphatase [Akebia quinata]
          Length = 498

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 18/310 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
               GR+ N LG+P+D  +       +   M +  PA  +   +   F+TGI+V+D+  P
Sbjct: 104 GATLGRIFNVLGEPVD--NLXXXXXXTXSPMHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 222 INEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 282 GSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 399

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 400 ELQDIIAILG 409


>gi|156739826|gb|ABU93566.1| ATP synthase beta subunit [Tectaria zeylanica]
          Length = 389

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 88  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 147

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 148 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 207

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 265

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 266 TSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 324

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 325 LQDIIAILG 333


>gi|46360673|gb|AAS89118.1| ATP synthase beta subunit [Haplomitrium mnioides]
          Length = 266

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 140/271 (51%), Gaps = 21/271 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D    LG  D  M   + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 2   LGRIFNVLGEPVD---DLGPVDTGMTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--- 212
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 59  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 117

Query: 213 ---NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              NL +S V  V    +E P  R    LTA+T+AEY       +VLL +D+I RF  + 
Sbjct: 118 NEHNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYLRDVNKQDVLLFIDNIFRFVQAG 177

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   
Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTREGSITSIQAVYVPADDLTDPAPA 235

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           +  + LD   VL+R LA +G YP VDPL S 
Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDST 266


>gi|312285187|gb|ADQ64335.1| ATP synthase beta subunit [Anomospermum chloranthum]
          Length = 359

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 19/276 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR  N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GVTLGRFFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIQVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 198

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 199 VINKQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 258

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 352


>gi|310644379|ref|YP_003949138.1| proton-translocating atpase alpha subunit [Paenibacillus polymyxa
           SC2]
 gi|309249330|gb|ADO58897.1| Proton-translocating ATPase alpha subunit [Paenibacillus polymyxa
           SC2]
          Length = 504

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 7/341 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           LG  + +    V +  +G   +I  G  V   G+    P      GRV+N LG+P+DG  
Sbjct: 60  LGLALNVEESNVGVVILGQFSDIREGGQVKRTGQIMQVPVGEAMIGRVVNPLGQPVDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +    + S+ P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+++
Sbjct: 120 PIATTEFR-PVESQAPGVMARKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTSI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
              ++  +     K I   +G++   V + +E       L+ ++VV A++ E   L  +A
Sbjct: 179 AIDAILNQKGNGMKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPSPLLYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +   + EYF  KG++VL++ D +T+ A + RE++      P    YP  VF    RLL
Sbjct: 239 PYSGCAMGEYFMYKGEHVLVVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++
Sbjct: 299 ERAAKLNDELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLEADLFYAGQRPAIN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              SVSR+   A     KK+  SL   + ++ E +     G
Sbjct: 359 VGISVSRVGGSAQIKAMKKVAGSLRLDLAQYRELQAFSQFG 399


>gi|116071304|ref|ZP_01468573.1| ATP synthase subunit A [Synechococcus sp. BL107]
 gi|116066709|gb|EAU72466.1| ATP synthase subunit A [Synechococcus sp. BL107]
          Length = 506

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 161/336 (47%), Gaps = 19/336 (5%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE + +  G  V   G+    P      GRV+N+LG+PIDG    
Sbjct: 63  IALNLEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGDAMLGRVVNSLGRPIDG---- 118

Query: 120 GKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KGD++      I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 -KGDIAASETRLIESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILR 231
            +   ++  ++D     +   VG++   V   +E  L +   L  +V+V A + E   L+
Sbjct: 178 AIAIDTILNQADQDMICVYVAVGQKAASVANVVE-VLRERGALGYTVIVAANASEPAALQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  +IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGASIAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER         KG++TA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A +   KK+  +L   + +F+E
Sbjct: 357 AINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|94676613|ref|YP_588612.1| ATP synthase F1, alpha subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|118573473|sp|Q1LTV2|ATPA_BAUCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|94219763|gb|ABF13922.1| ATP synthase F1, alpha subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 513

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 20/336 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR++N LG PIDG   L +  L   I +  P  + RQ + +  +TG + ID   P+ 
Sbjct: 102 SLLGRIVNTLGIPIDGKGKL-ENKLFSPIETNAPNVIERQSISEPIQTGYKSIDAMIPIG 160

Query: 160 HGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216
            GQR  +      GKSTL   ++  + +   K I   +G++   +   ++     N L  
Sbjct: 161 RGQRELIIGDRQTGKSTLAIDTIINQRNSDIKCIYVAIGQKASTINNVVQKLEEHNALIN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +++V AT+ +S  L+ +AP     + EYF + G+N L+I D +++ A + R+I+      
Sbjct: 221 TIIVTATASDSVALQYLAPYAGCVMGEYFRNIGENALVIYDDLSKQAIAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  +F    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDIFYLHSRLLERAARVSANYVETYTKGKIKGKTGSLTALPIIETQAGDVSSF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           I  +V SI DG I L  SL   G  P V+P  SVSR+   A +   K + S +   + ++
Sbjct: 341 IPTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGSAAQTKIIKTVSSGIRTTLAQY 400

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +   +D +  K ++    + + LKQ
Sbjct: 401 ---RELEAFSQFASDLDEVTRKQINYGKKVTELLKQ 433


>gi|308153649|sp|P07251|ATPA_YEAST RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|496674|emb|CAA56001.1| C-545 protein [Saccharomyces cerevisiae]
 gi|536167|emb|CAA84924.1| ATP1 [Saccharomyces cerevisiae]
 gi|332322831|dbj|BAK20454.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
 gi|332322832|dbj|BAK20455.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
 gi|332322833|dbj|BAK20456.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
          Length = 545

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 122 GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 177

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 178 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 237

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 238 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 297

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF   PRLLER    SEKE  G+
Sbjct: 298 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHPRLLERAAKLSEKEGSGS 357

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 358 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 417

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 418 KALKQVAGSLKLFLAQYRE 436


>gi|237783963|gb|ACR19778.1| ATP synthase CF1 beta subunit [Nolana acuminata]
          Length = 357

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 139/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|27904519|ref|NP_777645.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|32171342|sp|Q89B41|ATPA_BUCBP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|27903916|gb|AAO26750.1| ATP synthase subunit alpha [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 514

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 169/344 (49%), Gaps = 24/344 (6%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  + +GE   I+ G  +   GR F I   + + GRVINALG PIDG   +
Sbjct: 62  IALNLEKNVVGAIVMGEYTHITEGTKIISTGRIFEIPVGSKFLGRVINALGVPIDGKGRI 121

Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
            +   L +EI    P  ++RQ++ +  +TG + ID   P+  GQR  +      GK++L 
Sbjct: 122 QEEKFLPVEI--NAPGVIDRQKISEPLQTGYKSIDAMVPIGKGQRELIIGDRQTGKTSLA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
             ++  + +   K I   +G++   +   +   L DN  L  ++V+VA++ ES  L+ + 
Sbjct: 180 IDTIINQRNTKIKCIYVAIGQKFSTIVNLVRQ-LEDNQALNHTIVIVASASESAALQYLV 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  ++ E+F  +G + L++ D +++ A + R+I+      P    +P  +F    RLL
Sbjct: 239 PYSGCSLGEFFRDQGKDALIVYDDLSKHAIAYRQISLLLRRPPGREAFPGDIFYLHARLL 298

Query: 295 ER------------IGPSEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER            +G   K   G++TA+  +     + +  I  +V SI DG I L  +
Sbjct: 299 ERACRVNSNYLKNILGTVNKFSTGSLTALPIIETQDGDVSSFIPTNVISITDGQIFLESN 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   G  P ++P  SVSR+   A     +KL S +   + +++E
Sbjct: 359 LFNSGIRPAINPGISVSRVGGAAQCQIIRKLSSGIRTSLAQYQE 402


>gi|322419959|ref|YP_004199182.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Geobacter sp. M18]
 gi|320126346|gb|ADW13906.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Geobacter sp. M18]
          Length = 440

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 164/347 (47%), Gaps = 14/347 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISL-GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           G++++I+ D V I   G    + L   LVF     +   +    GR+ N   +PIDG   
Sbjct: 45  GEILKIDGDSVLIQVFGETRGLDLDARLVFTDAVKKAPLAEDVLGRIFNGSFRPIDGAPM 104

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +    + + P  +R R E+  +TGI  ID+   L  GQ++ +F+ +G+    + 
Sbjct: 105 FIPRQWAPITGTPINPT-SRARPEEFIETGITAIDLLNTLVKGQKLPIFSCAGLPAKEMA 163

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM 233
           +   R     K     V+   +G    E   F  D L     + V  +  + E  + R +
Sbjct: 164 ATVLRHARLSKGGAFVVVFVALGLPHHEF-SFYMDVLAGMQGEFVAFINRAGEPVMERLL 222

Query: 234 APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           AP   + +AEY + ++G +VL+++  +T +  ++RE++T   ELP  RGYP  ++S+L  
Sbjct: 223 APRFGLAVAEYLAFTQGMDVLVLITDMTNYCDALREVSTAREELPGRRGYPGYMYSDLAS 282

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ER G     +G++T +  V +  D+   PI D    I +G IVL+R +  +G +PPVD
Sbjct: 283 LYERAGRIRGVEGSVTMLPVVTMPEDDITHPIPDLTGYITEGQIVLSRDMHRKGIFPPVD 342

Query: 353 PLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDIRLIGG 394
            L  +SRL  +         D + +  +L  L  +  E R +  I G
Sbjct: 343 LLPCLSRLMQRGIGKGRTREDHRGIADALYKLYAKGRELRRLEAIVG 389


>gi|149384757|gb|ABR25187.1| ATP synthase beta chain [Tectaria apiifolia]
          Length = 426

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 272 ATTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|323388513|gb|ADX60542.1| ATP synthase beta subunit [Filicium decipiens]
          Length = 329

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 22  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 81

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 82  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 141

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 142 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 199

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 200 VYVPADDLTDPALATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 259

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 260 TAQRVKQTLQRYKELQDIIAILG 282


>gi|237783979|gb|ACR19786.1| ATP synthase CF1 beta subunit [Lycium chinense]
          Length = 363

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N  +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|313234874|emb|CBY24818.1| unnamed protein product [Oikopleura dioica]
          Length = 478

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 140/283 (49%), Gaps = 17/283 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GR+ N  GKPID    +   D  ++IM +     +R   E+  +TGI  ID+   
Sbjct: 91  SEDMLGRIFNGSGKPIDNGPPIMPEDY-LDIMGQPINPQSRIYPEEMIQTGISTIDVMNS 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--------------VIISLVGERGREVR 203
           +  GQ+I +F+ +G+  + + +   R     K              ++ + +G      R
Sbjct: 150 IARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKEGEATEEGKSNFAIVFAAMGVNMEAAR 209

Query: 204 EFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
            F  D+    N++  V+ +  +++  I R + P  A+T AEY + + G +VL+IL  ++ 
Sbjct: 210 FFKSDFEQRGNMENVVLFLNLANDPTIERIITPRIALTAAEYLAYQCGKHVLVILTDMSS 269

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A ++REI+    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +  ++  
Sbjct: 270 YAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRAGSITQIPILTMPNEDIT 329

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 330 HPIPDLTGYITEGQIYVDRQLQNRQIYPPINVLPSLSRLMKSA 372


>gi|310659616|ref|YP_003937337.1| v-type ATP synthase beta chain (v-type ATPase subunit b)
           [Clostridium sticklandii DSM 519]
 gi|308826394|emb|CBH22432.1| V-type ATP synthase beta chain (V-type ATPase subunit B)
           [Clostridium sticklandii]
          Length = 457

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 22/310 (7%)

Query: 102 CGRVINALGKPIDGDD---SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GR  N +G P+D      S  K +++   M+ +     R  +E    TGI  ID    L
Sbjct: 87  LGRTFNGIGMPVDDGPQVYSSKKHNVNGRPMNPISRRYPRNYLE----TGISAIDSLMTL 142

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLG 211
             GQ++ +F+G+G+  + L +  AR        + F  ++ + +G +  +   F + +  
Sbjct: 143 IRGQKLPIFSGNGMPHNELAAQIARQARVRGEEENF-AIVFAAMGVKHDDADYFRKSFES 201

Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269
              L++ V+ +  +DE  + R   P  A+T AEY +  +G ++L+I+  +T +  ++REI
Sbjct: 202 SGVLERVVMYLNLADEPVVERITTPRCALTAAEYLAYEEGMHILVIMTDMTSYGEALREI 261

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           ++   E+P  +GYP  ++S+L +L ER G  +  KG++T +  + +  D+   PI D   
Sbjct: 262 SSAREEVPSRKGYPGYLYSDLAQLYERAGMLDGAKGSVTLLPILTMPNDDITHPIPDLSG 321

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFE 384
            I +G IVL+R L ++  YPP++ L S+SRL      +    AD  ++ S L     R +
Sbjct: 322 YITEGQIVLSRDLYQKNIYPPINILPSLSRLMKDGIGEGMTRADHDEVSSQLFSSYSRVQ 381

Query: 385 ETRDIRLIGG 394
           E R +  I G
Sbjct: 382 EVRSLSQIIG 391


>gi|269114798|ref|YP_003302561.1| ATP synthase subunit alpha [Mycoplasma hominis]
 gi|268322423|emb|CAX37158.1| ATP synthase alpha chain [Mycoplasma hominis ATCC 23114]
          Length = 527

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 18/371 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           +G  + +  D+V I  +G    I     V+   +   +P      GRV++AL  PIDG  
Sbjct: 60  IGMALNLEEDLVGIVVMGDDRNIVENSTVYRTKQVISTPVGNHLSGRVLDALANPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + + + +  I    P  M R+ V +  +TGI  ID   P+  GQR  +      GK+ +
Sbjct: 120 PI-QYEYTRPIFKIAPGVMTRKEVNQPLETGILAIDAMIPIGKGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              ++  +       I   VG++   + + ++     D LK + ++ A++ +S  L+ +A
Sbjct: 179 AIDAILNQKGRNVYCIYVAVGQKNSTIAQIVDQLAKHDALKYTTIISASASDSAPLQYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T +TIAE + ++G +VL+I D +++ A + R ++      P    YP  VF    +LL
Sbjct: 239 PYTGITIAEEWMARGKDVLIIYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYIHSQLL 298

Query: 295 ERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     S+   G+ITA+  +    ++    I  +V SI DG I    +L   G+ P +D
Sbjct: 299 ERAARVNSDYGGGSITALPIIETQAEDIAAYIPTNVISITDGQIFTKEALFNSGQRPAID 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV-- 410
              SVSR+   A +   KK+VSSL   + ++ E     ++   + G D  LD+A   V  
Sbjct: 359 IGYSVSRVGSAAQTKLTKKVVSSLKLELAQYNE-----MLAFAQFGSD--LDQATRTVLD 411

Query: 411 --PIIYDFLKQ 419
               +Y+ LKQ
Sbjct: 412 HGAKVYELLKQ 422


>gi|256028113|ref|ZP_05441947.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D11]
          Length = 439

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 158/336 (47%), Gaps = 20/336 (5%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDG 115
           DN+G VI  N  +           I  GD V   G+    P+     GRVINALG PIDG
Sbjct: 8   DNVGAVILGNASL-----------IKEGDEVRATGKVVSVPTGDELLGRVINALGDPIDG 56

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 57  KGEI-HADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKT 115

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILR 231
            +   ++  +     K I   +G++   V +  +    LG  +  +++V AT+ E+  L+
Sbjct: 116 AIAIDTIINQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLG-CMDYTIIVAATASEAAPLQ 174

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP + V I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    
Sbjct: 175 YMAPYSGVAIGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHS 234

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 235 RLLERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRP 294

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A     K++ S +   + ++ E
Sbjct: 295 AINAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 330


>gi|208435031|ref|YP_002266697.1| ATP synthase F1. subunit alpha [Helicobacter pylori G27]
 gi|226739894|sp|B5Z8D2|ATPA_HELPG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|208432960|gb|ACI27831.1| ATP synthase F1. subunit alpha [Helicobacter pylori G27]
          Length = 503

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|149384607|gb|ABR25126.1| ATP synthase beta chain [Polystichum lemmonii]
          Length = 426

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|46360683|gb|AAS89123.1| ATP synthase beta subunit [Isotachis multiceps]
          Length = 382

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 26/308 (8%)

Query: 109 LGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGV 166
            G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+
Sbjct: 9   FGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGL 65

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 66  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISES 125

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 126 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 185

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 186 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 243

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDP  S S +  + W   E+       +   + R++E +DI  I
Sbjct: 244 TTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKELQDIIAI 302

Query: 393 GGYRPGVD 400
               PG+D
Sbjct: 303 ----PGLD 306


>gi|18072083|gb|AAL58463.1|AF456770_1 putative EscN protein [Escherichia coli]
          Length = 110

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 2/111 (1%)

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD   + R  A  TA TIAE+F  +G NVLL++DS+TR+A + R++   SGE  V  G+
Sbjct: 2   TSDRPALERMKAAFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGF 61

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           P SVFS LP+LLER GP+   KG+ITA+ +VL++ DN NDPI D VRSILD
Sbjct: 62  PPSVFSSLPKLLERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILD 110


>gi|116494660|ref|YP_806394.1| F0F1 ATP synthase subunit alpha [Lactobacillus casei ATCC 334]
 gi|191638159|ref|YP_001987325.1| F0F1 ATP synthase subunit alpha [Lactobacillus casei BL23]
 gi|227535356|ref|ZP_03965405.1| F0F1 ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631739|ref|ZP_04674770.1| ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066219|ref|YP_003788242.1| F0F1-type ATP synthase subunit alpha [Lactobacillus casei str.
           Zhang]
 gi|122263919|sp|Q03A20|ATPA_LACC3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739900|sp|B3WDL6|ATPA_LACCB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116104810|gb|ABJ69952.1| ATP synthase F1 subcomplex alpha subunit [Lactobacillus casei ATCC
           334]
 gi|165940487|gb|ABY75188.1| F0F1-type ATP synthase alpha subunit [Lactobacillus casei str.
           Zhang]
 gi|190712461|emb|CAQ66467.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
           sector subunit alpha) [Lactobacillus casei BL23]
 gi|227186952|gb|EEI67019.1| F0F1 ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526204|gb|EEQ65205.1| ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438626|gb|ADK18392.1| F0F1-type ATP synthase, alpha subunit [Lactobacillus casei str.
           Zhang]
 gi|327382190|gb|AEA53666.1| ATP synthase subunit A [Lactobacillus casei LC2W]
 gi|327385387|gb|AEA56861.1| ATP synthase subunit A [Lactobacillus casei BD-II]
          Length = 509

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 157/337 (46%), Gaps = 17/337 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  + +  + V I  +G  +EI  GD V   GR    P      GRV+N+LG+P+DG  +
Sbjct: 61  GMALNLETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGDAMIGRVVNSLGQPVDGLGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  I  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++ 
Sbjct: 121 I-KTDKTRPIEFKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSDESPIL 230
             ++  + D     +   +G++   VR  +E      LKK      ++V+ A   E   +
Sbjct: 180 IDTILNQKDQNMICVYVAIGQKDSTVRAQVE-----TLKKYGAMDYTIVLTAGPSEPAPM 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + E F   G +VL++ D +++ A S RE++      P    YP  +F   
Sbjct: 235 LYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 295 SRLLERAAKLSDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P +D  ASVSR+   A     KK+  +L   +  F E
Sbjct: 355 PAIDAGASVSRVGGDAQVKAMKKVAGTLRLDLASFRE 391


>gi|296327994|ref|ZP_06870529.1| ATP synthase F1 sector alpha subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296154950|gb|EFG95732.1| ATP synthase F1 sector alpha subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 500

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVINALG PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGEDLLGRVINALGDPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-HVDKYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V + I   L D   +  +++V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQDVKCIYVAIGQKRSTVAQ-IYKKLSDLGCMDYTIIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 391


>gi|149384767|gb|ABR25192.1| ATP synthase beta chain [Tectaria zeylanica]
          Length = 426

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 274 TSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|25808427|gb|AAN74340.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 337

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 11/334 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G+V+ +  D V +   G G  I  G  V         P      GRV+NALG+PIDG   
Sbjct: 2   GEVVNLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 62  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 120

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +
Sbjct: 121 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYL 178

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RL
Sbjct: 179 APYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIPSRL 238

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P +
Sbjct: 239 LERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAI 298

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++  +L   + ++ E
Sbjct: 299 NVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRE 332


>gi|19703702|ref|NP_603264.1| F0F1 ATP synthase subunit alpha [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|81590911|sp|Q8RGE0|ATPA_FUSNN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|19713826|gb|AAL94563.1| ATP synthase alpha chain, sodium ion specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 500

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           +G  + +  D V    +G    I  GD V   G+    P+     GRVINALG PIDG  
Sbjct: 60  MGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGEDLLGRVINALGDPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 EI-HVDKYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   V + I   L D   +  +++V AT+ E+  L+ M
Sbjct: 179 AIDTIINQKGQDVKCIYVAIGQKRSTVAQ-IYKKLSDLGCMDYTIIVAATASEAAPLQYM 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP + V I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RL
Sbjct: 238 APYSGVAIGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRL 297

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 298 LERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAI 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++ S +   + ++ E
Sbjct: 358 NAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE 391


>gi|308184874|ref|YP_003929007.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori SJM180]
 gi|308060794|gb|ADO02690.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori SJM180]
          Length = 503

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|254430960|ref|ZP_05044663.1| ATP synthase F1, alpha subunit [Cyanobium sp. PCC 7001]
 gi|197625413|gb|EDY37972.1| ATP synthase F1, alpha subunit [Cyanobium sp. PCC 7001]
          Length = 505

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 178/390 (45%), Gaps = 22/390 (5%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q  EDY K++ V   G +  I      V  L Q V  G+ V  +       G  + + 
Sbjct: 13  LKQQIEDYDKSVSVSNVGTVLQIGDGIARVYGLQQ-VMAGELVEFEDGTE---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G G  I  G  V   G+    P      GRV+N+LG+PIDG     KGD++
Sbjct: 69  DDNVGVVLMGEGGGIQEGSTVKATGKIASVPVGDAMLGRVVNSLGQPIDG-----KGDIA 123

Query: 126 ME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSM 180
                 I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ + +  
Sbjct: 124 TSETRLIESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDT 183

Query: 181 FARSDCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLT 237
                  D V + + +G++   V   + D L +   L  ++VV A++ E+  ++ +AP T
Sbjct: 184 IINQKGQDVVCVYVAIGQKNASVANVV-DVLREKGALDYTIVVCASASEAAAMQYLAPYT 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AE F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER 
Sbjct: 243 GAALAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERA 302

Query: 298 G--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                   KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   
Sbjct: 303 AKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGI 362

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SVSR+   A +   KK+  +L   + +F+E
Sbjct: 363 SVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|149384867|gb|ABR25242.1| ATP synthase beta chain [Hemidictyum marginatum]
          Length = 426

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 151/309 (48%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 37  TTLGRISNVLGEPVDNLGPVQSGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITEPINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|156739744|gb|ABU93525.1| ATP synthase beta subunit [Dryopteris championii]
          Length = 394

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSNATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|108563497|ref|YP_627813.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori HPAG1]
 gi|118573478|sp|Q1CSD3|ATPA_HELPH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|107837270|gb|ABF85139.1| ATP synthase F1, subunit alpha [Helicobacter pylori HPAG1]
          Length = 503

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|257867619|ref|ZP_05647272.1| V-type ATPase [Enterococcus casseliflavus EC30]
 gi|257873949|ref|ZP_05653602.1| V-type ATPase [Enterococcus casseliflavus EC10]
 gi|257801702|gb|EEV30605.1| V-type ATPase [Enterococcus casseliflavus EC30]
 gi|257808113|gb|EEV36935.1| V-type ATPase [Enterococcus casseliflavus EC10]
          Length = 462

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 140/273 (51%), Gaps = 11/273 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV + LGKP D    +   +  +++  +    M R   ++  +TGI  ID    L  
Sbjct: 85  MMGRVFDGLGKPKDNGPRI-LPEKRIDVNGEAINPMARDFPDEFIQTGISTIDHLNTLVR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDN- 213
           GQ++ +F+ SG+    + +  AR            ++ + +G    E   F++++     
Sbjct: 144 GQKLPIFSASGLPHKEIAAQIARQATVPSQEGNFAIVFAAIGIPFEEAEFFVDEFRKTGA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272
           L +SV+ +  +++  I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+  
Sbjct: 204 LDRSVLFMNLANDPAIERIATPKMALTAAEYLAFEKGMHVLVIMTDMTNYCEALREISAA 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV-ISVLVDGDNHNDPIADSVRSI 331
             E+P  RGYP  +++ L  L ER G    ++G++T + I  + DGD  + PI D    I
Sbjct: 264 RREVPGRRGYPGYLYTNLATLYERAGRLMGKEGSVTQIPILTMPDGDKTH-PIPDLTGYI 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            +G I+L+R L +    PPVD L S+SRL DK 
Sbjct: 323 TEGQIILSRDLYKRNINPPVDILPSLSRLKDKG 355


>gi|300898051|ref|ZP_07116420.1| flagellum-specific ATP synthase domain protein [Escherichia coli MS
           198-1]
 gi|300358229|gb|EFJ74099.1| flagellum-specific ATP synthase domain protein [Escherichia coli MS
           198-1]
          Length = 227

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 9/172 (5%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           Q +  N DI Y+ P      +  G  VF   +   I     W GRV+N LG+P+DG   L
Sbjct: 60  QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119

Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
              DL    +  +PP++N   R+ V++    G++ I+    +  GQR+G+ AGSG+GKS 
Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDES 227
           LL M  R    D V++ L+GERGREV+EFI+  LG D L KS+VVVA  DES
Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPPDES 227


>gi|257876533|ref|ZP_05656186.1| V-type ATPase [Enterococcus casseliflavus EC20]
 gi|325571170|ref|ZP_08146742.1| V-type ATP synthase, subunit B [Enterococcus casseliflavus ATCC
           12755]
 gi|257810699|gb|EEV39519.1| V-type ATPase [Enterococcus casseliflavus EC20]
 gi|325156255|gb|EGC68441.1| V-type ATP synthase, subunit B [Enterococcus casseliflavus ATCC
           12755]
          Length = 462

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 140/272 (51%), Gaps = 11/272 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV + LGKP D    +   +  +++  +    M R   ++  +TGI  ID    L  
Sbjct: 85  MMGRVFDGLGKPKDNGPRI-LPEKRIDVNGEAINPMARDFPDEFIQTGISTIDHLNTLVR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDN- 213
           GQ++ +F+ SG+    + +  AR            ++ + +G    E   F++++     
Sbjct: 144 GQKLPIFSASGLPHKEIAAQIARQATVPSQEGNFAIVFAAIGIPFEEAEFFVDEFRKTGA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272
           L +SV+ +  +++  I R   P  A+T AEY +  KG +VL+I+  +T +  ++REI+  
Sbjct: 204 LDRSVLFMNLANDPAIERIATPKMALTAAEYLAFEKGMHVLVIMTDMTNYCEALREISAA 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV-ISVLVDGDNHNDPIADSVRSI 331
             E+P  RGYP  +++ L  L ER G    ++G++T + I  + DGD  + PI D    I
Sbjct: 264 RREVPGRRGYPGYLYTNLATLYERAGRLMGKEGSVTQIPILTMPDGDKTH-PIPDLTGYI 322

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            +G I+L+R L +    PPVD L S+SRL DK
Sbjct: 323 TEGQIILSRDLYKRNINPPVDILPSLSRLKDK 354


>gi|158321582|ref|YP_001514089.1| ATP synthase F1, alpha subunit [Alkaliphilus oremlandii OhILAs]
 gi|166990352|sp|A8MJW1|ATPA_ALKOO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158141781|gb|ABW20093.1| ATP synthase F1, alpha subunit [Alkaliphilus oremlandii OhILAs]
          Length = 505

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 175/383 (45%), Gaps = 23/383 (6%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVI 106
           + + Q    DN+G V+           +G    I  GD+V   GR    P      GRV+
Sbjct: 60  YGMAQNLEEDNVGCVL-----------LGSDATIREGDIVKRTGRIVEVPVGEALLGRVV 108

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           NALG+PIDG   +   D   E+    P  ++R+ V +  +TGI+ ID   P+  GQR  +
Sbjct: 109 NALGQPIDGKGPINT-DAYREVERVAPGIISRKSVHEPLQTGIKAIDSMIPIGRGQRELI 167

Query: 167 FAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYL--GDNLKKSVVVVA 222
                 GK+ L +         D + I + +G++   V + I+D L     ++ +++V +
Sbjct: 168 IGDRQTGKTALAIDTIINQKNTDVICIYVAIGQKKSTVAQ-IKDSLEKAGAMEYTIIVSS 226

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+DE   L+ +AP     + E F  KG +VL+I D +++ A + R ++      P    Y
Sbjct: 227 TADELAPLQYLAPYAGCAMGEEFMEKGKHVLIIYDDLSKHAVAYRAMSLLLRRPPGREAY 286

Query: 283 PTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E+  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 287 PGDVFYLHSRLLERAAKLSDERGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLET 346

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P V+P  SVSR+   A     KK+  +L   + ++   R++     +   +D
Sbjct: 347 ELFNAGIRPAVNPGISVSRVGGNAQIKAMKKVAGTLRLELAQY---RELAAFAQFGSDLD 403

Query: 401 LILDKAVHQVPIIYDFLKQSPSD 423
               + + Q   I + LKQ   D
Sbjct: 404 KETQERLSQGERILEILKQPQYD 426


>gi|302379701|ref|ZP_07268186.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312608|gb|EFK94604.1| ATP synthase ab C-terminal domain protein [Finegoldia magna
           ACS-171-V-Col3]
          Length = 588

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 135/261 (51%), Gaps = 12/261 (4%)

Query: 131 KVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++P P+  R  V++  +TG R++D+F PL  G  + +  G G GK+      A+    D 
Sbjct: 195 RIPRPSKERLDVDRLLETGQRILDVFFPLAKGGTVAIPGGFGTGKTMTQHQLAKYADADI 254

Query: 190 VIISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPL-TAVTI 241
           +I    GERG E+ E +ED+        G  L +  V++A +   P+  + A + T +T+
Sbjct: 255 IIYIGCGERGNEMTEVLEDFPKLIDPNNGKPLMERTVLIANTSNMPVAAREASIYTGITM 314

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--- 298
           AEYF   G +V ++ DS +R+A ++REI+    E+P   GYP  + S + +  ER G   
Sbjct: 315 AEYFRDMGYDVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAQFYERAGIVK 374

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++T + +V   G + ++P+ ++ +  ++  + L++ LA    YP ++ ++S S
Sbjct: 375 TLNDNEGSVTIIGAVSPAGGDFSEPVTENTKRFVNVFLGLDKDLAYSRHYPAINWMSSYS 434

Query: 359 RLADKAWSADEKKLVSSLTHL 379
              +K     E KL   +  L
Sbjct: 435 SYVEKLRDYYESKLGEDVVDL 455


>gi|291615007|ref|YP_003525164.1| H(+)-transporting two-sector ATPase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585119|gb|ADE12777.1| H(+)-transporting two-sector ATPase [Sideroxydans lithotrophicus
           ES-1]
          Length = 599

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 25/298 (8%)

Query: 121 KGDLS-MEIMSKVP-----PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           KG++S +++  + P     P  NR    +   TG R++D F PL  G R  V    G GK
Sbjct: 179 KGNISELQLFHRWPVRIPRPYRNRDNAVEPLLTGQRILDTFFPLVKGGRAAVPGPFGAGK 238

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDES 227
           + +    AR    D VI    GERG E+ + +E +        G +L +  ++VA +   
Sbjct: 239 TIVQQQIARWSDADIVIYVGCGERGNELVDILESFPKLTDPNTGRSLMERTLLVANTSNM 298

Query: 228 PILRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           P++ + A +    T+AEY+  +G +V+++ DS +R+A ++RE+A   G++PV  GYP  +
Sbjct: 299 PVVAREASIYVGATLAEYYRDQGYDVVMVADSTSRWAEALREVAGRLGQMPVEEGYPAYL 358

Query: 287 FSELPRLLERIGPSEKEKGN---ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            S L    ER G      GN   IT + +V   G + ++P+    + I      L++ LA
Sbjct: 359 ASRLAAFYERAGRVTTLSGNSGSITLIGAVSPPGGDFSEPVTSHTKEITKTFWALSKELA 418

Query: 344 EEGRYPPVDPLASVSRLAD--KAWSAD------EKKLVSSLTHLIHRFEETRDIRLIG 393
           +   YP VD + S S        W A+      E    ++L  L    E  R + L+G
Sbjct: 419 DARHYPAVDWVESFSGYVASCSGWWAENVDPRWESHRATALGILSQADELARIVNLVG 476


>gi|227513064|ref|ZP_03943113.1| F0F1 ATP synthase subunit alpha [Lactobacillus buchneri ATCC 11577]
 gi|227083639|gb|EEI18951.1| F0F1 ATP synthase subunit alpha [Lactobacillus buchneri ATCC 11577]
          Length = 522

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 157/342 (45%), Gaps = 9/342 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
            G V  +  + V I  +G    I  GD V   GR    P      GRV+N+LG+PIDG  
Sbjct: 60  FGMVQNLEANDVGIMVLGDDTNIREGDSVKRTGRIMEVPVGDDMIGRVVNSLGQPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K D    I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++
Sbjct: 120 PI-KADDHKAIEHKAPGVMDRKSVFEPLQTGIKSIDSLIPIGRGQRELIIGDRKTGKTSI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKM 233
              ++  + D   K I   +G++   VR  +   +  G  +  + V+ A   E   L  +
Sbjct: 179 AIDTILNQKDQNMKCIYVAIGQKESTVRASVSTLEKFG-AMDYTTVISAGPSEPASLLYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  KG +VL++ D +++ A++ RE++      P    YP  +F    RL
Sbjct: 238 APYAGATMGEYFMHKGQHVLIVYDDLSKQANAYRELSLILRRPPGREAYPGDIFYTHSRL 297

Query: 294 LERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER    S+K   G++TA+  V     + +  I  +V SI DG I L+      G  P V
Sbjct: 298 LERAAKLSDKLGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAV 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           D   SVSR+   A     KK+  +L   +  + E       G
Sbjct: 358 DAGTSVSRVGGDAQVKAMKKVAGTLRLDLASYHELESFAQFG 399


>gi|50261318|ref|YP_052891.1| ATP synthase F1 subunit alpha [Saprolegnia ferax]
 gi|48237631|gb|AAT40680.1| ATP synthase F1 subunit alpha [Saprolegnia ferax]
          Length = 509

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 178/395 (45%), Gaps = 23/395 (5%)

Query: 44  CLGDFVVHQGK----NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPS 98
           C G   +  G+    N  N+ G  + +  D+V +       EI  G+ V   G     P+
Sbjct: 38  CYGLTKIQAGEMVEFNKGNIKGMALNLEPDVVGVVVFSNEREIQEGNFVKRTGSIVSVPT 97

Query: 99  A-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
                GRV++ALG+PIDG  ++    LS  +  K P  M RQ V +  +TG++ +D   P
Sbjct: 98  GEGLLGRVVDALGQPIDGKGAIKSNTLS-RVEIKAPGIMPRQSVSEPVQTGLKAVDSLIP 156

Query: 158 LCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK-----VIISLVGERGREVREFIE 207
           +  GQR  +      GK+     T+++        DK      I   VG++   V +  +
Sbjct: 157 IGRGQRELIIGDRQTGKTSIAMDTIINQVKAHQSGDKDNQLFCIYVAVGQKRSTVADLTK 216

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                N L  S++V AT+ +S  L+ +AP T  T+ EYF   G + ++  D +++ A + 
Sbjct: 217 TLEEKNALFFSIIVAATASDSAPLQFLAPYTGCTLGEYFRDNGKHAVIFYDDLSKQAVAY 276

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPI 324
           R+++      P    YP  VF    RLLER          G++TA+  +     + +  I
Sbjct: 277 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNIAIGGGSLTALPVIETQAGDVSAYI 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L   L  +G+ P +    SVSR+   A     K++  S+   + +F 
Sbjct: 337 PTNVISITDGQIFLETELFNQGQRPAISVGLSVSRVGSSAQIKAMKQIAGSMKLELAQF- 395

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             R+++    +   +D    + +H+   + + LKQ
Sbjct: 396 --REVQAFSQFGSDLDAATQQQLHRGVRLTEMLKQ 428


>gi|18075732|emb|CAD11286.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|61968301|gb|AAX57077.1| ATP synthase beta subunit [Pseudolachnostylis maprouneifolia]
          Length = 479

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G I      +   D+  DP  
Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAILLFKQFMYLADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|290745817|gb|ADD51578.1| ATP synthase beta chain [Ceradenia pilipes]
          Length = 411

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 152/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +      I    P           F+TGI+V+D+  P  
Sbjct: 73  LGRISNVLGEPVD---NLGPVRSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 129

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 130 RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 188

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 189 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 248

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 249 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 306

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 307 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 365

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 366 ELQDIIAILG 375


>gi|25808455|gb|AAN74354.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGKIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF   G + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHGRHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|297587247|ref|ZP_06945892.1| H(+)-transporting two-sector ATPase [Finegoldia magna ATCC 53516]
 gi|297575228|gb|EFH93947.1| H(+)-transporting two-sector ATPase [Finegoldia magna ATCC 53516]
          Length = 588

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 135/261 (51%), Gaps = 12/261 (4%)

Query: 131 KVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++P P+  R  V++  +TG R++D+F PL  G  + +  G G GK+      A+    D 
Sbjct: 195 RIPRPSKERLDVDRLLETGQRILDVFFPLAKGGTVAIPGGFGTGKTMTQHQLAKYADADI 254

Query: 190 VIISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPL-TAVTI 241
           +I    GERG E+ E +ED+        G  L +  V++A +   P+  + A + T +T+
Sbjct: 255 IIYIGCGERGNEMTEVLEDFPKLIDPNNGKPLMERTVLIANTSNMPVAAREASIYTGITM 314

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--- 298
           AEYF   G +V ++ DS +R+A ++REI+    E+P   GYP  + S + +  ER G   
Sbjct: 315 AEYFRDMGYDVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAQFYERAGIVK 374

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++T + +V   G + ++P+ ++ +  ++  + L++ LA    YP ++ ++S S
Sbjct: 375 TLNDNEGSVTIIGAVSPAGGDFSEPVTENTKRFVNVFLGLDKDLAYSRHYPAINWMSSYS 434

Query: 359 RLADKAWSADEKKLVSSLTHL 379
              +K     E KL   +  L
Sbjct: 435 SYVEKLRDYYESKLGEDVVDL 455


>gi|149384791|gb|ABR25204.1| ATP synthase beta chain [Thelypteris globulifera]
          Length = 426

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMS-KVPPAMNRQRVEKGF-KTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +    +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPTHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|169824863|ref|YP_001692474.1| V-type ATP synthase subunit A [Finegoldia magna ATCC 29328]
 gi|167831668|dbj|BAG08584.1| V-type sodium ATP synthase subunit A [Finegoldia magna ATCC 29328]
          Length = 588

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 135/261 (51%), Gaps = 12/261 (4%)

Query: 131 KVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++P P+  R  V++  +TG R++D+F PL  G  + +  G G GK+      A+    D 
Sbjct: 195 RIPRPSKERLDVDRLLETGQRILDVFFPLAKGGTVAIPGGFGTGKTMTQHQLAKYADADI 254

Query: 190 VIISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPL-TAVTI 241
           +I    GERG E+ E +ED+        G  L +  V++A +   P+  + A + T +T+
Sbjct: 255 IIYIGCGERGNEMTEVLEDFPKLIDPNNGKPLMERTVLIANTSNMPVAAREASIYTGITM 314

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--- 298
           AEYF   G +V ++ DS +R+A ++REI+    E+P   GYP  + S + +  ER G   
Sbjct: 315 AEYFRDMGYDVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAQFYERAGIVK 374

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++T + +V   G + ++P+ ++ +  ++  + L++ LA    YP ++ ++S S
Sbjct: 375 TLNDNEGSVTIIGAVSPAGGDFSEPVTENTKRFVNVFLGLDKDLAYSRHYPAINWMSSYS 434

Query: 359 RLADKAWSADEKKLVSSLTHL 379
              +K     E KL   +  L
Sbjct: 435 SYVEKLRDYYESKLGEDVVDL 455


>gi|328681711|gb|AEB32928.1| ATP synthase beta subunit [Bazzania involuta]
          Length = 380

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 153/302 (50%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--------K 215
            G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +         
Sbjct: 58  GGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINEQNISES 116

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|2493127|sp|Q38681|VATB1_ACEAT RecName: Full=V-type proton ATPase subunit B 1; Short=V-ATPase
           subunit B 1; AltName: Full=Vacuolar proton pump subunit
           B 1
 gi|1303677|dbj|BAA09099.1| adenosine triphosphatase B subunit [Acetabularia acetabulum]
          Length = 492

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 144/288 (50%), Gaps = 23/288 (7%)

Query: 98  SACWCGRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV N  GKPIDG    L +  L ++  S  P    R   E+  +TG+  ID+  
Sbjct: 103 SKDMLGRVFNGSGKPIDGGPPVLAEAYLDIQGSSINPS--ERTYPEEMIQTGVSTIDVMN 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------------------VIISLVGER 198
            +  GQ+I +F+ +G+  + + +   R     K                  ++ + +G  
Sbjct: 161 SIARGQKIPLFSAAGLPHNDIAAQICRQAGLVKRGNQDSMIDAGHEEEEFAIVFAAMGVN 220

Query: 199 GREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
                 F +D+  + +++K+V+ +  +++  I R + P  A+T AEY + + G +VL+IL
Sbjct: 221 METAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVIL 280

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
             ++ +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + + 
Sbjct: 281 TDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTMP 340

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            D+   PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 341 NDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 388


>gi|4995061|emb|CAB43982.1| H(+)-transporting ATP synthase [Aquilaria beccariana]
          Length = 476

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 23/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D  +   + K  PA  +   +   F+TGI+V+D+  
Sbjct: 94  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 150

Query: 157 PLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +    
Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEIKES 209

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 210 GVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 269

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP
Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPV-DPLASVSRLADKAWSADEK-KLVSSLTHLIH 381
              +  + LD   VL+R L  +G YP V DPL S S +       +E  +    +   + 
Sbjct: 328 APATTFAHLDATTVLSRGLGAKGIYPAVEDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQ 387

Query: 382 RFEETRDIRLIGG 394
            ++E +DI  I G
Sbjct: 388 XYKELQDIIAILG 400


>gi|332163552|ref|YP_004300129.1| F0F1 ATP synthase subunit alpha [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667782|gb|ADZ44426.1| F0F1 ATP synthase subunit alpha [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861782|emb|CBX71955.1| ATP synthase subunit alpha [Yersinia enterocolitica W22703]
          Length = 513

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+P+DG  S+     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPVDGKGSVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|307244026|ref|ZP_07526145.1| ATP synthase F1, alpha subunit [Peptostreptococcus stomatis DSM
           17678]
 gi|306492550|gb|EFM64584.1| ATP synthase F1, alpha subunit [Peptostreptococcus stomatis DSM
           17678]
          Length = 500

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 157/338 (46%), Gaps = 17/338 (5%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  ++V    +G    I  GDLV   GR    P      GRV+NALG+PIDG  
Sbjct: 60  FGMALNLEEEVVGAVILGDDSSIKEGDLVKRTGRIVEVPVGEAMIGRVVNALGQPIDG-- 117

Query: 118 SLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
              +GD+  +    V    P  M+R+ V +  +TGI+ ID   P+  GQR  V      G
Sbjct: 118 ---RGDILTDKTRPVEYPAPGIMSRKSVFEPLQTGIKSIDSMIPIGRGQRELVIGDRQTG 174

Query: 174 KSTLLS-MFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVVVATSDESPI 229
           K+++L+         D + I + +G++   V + +  +   G  +  ++VV AT+ ES  
Sbjct: 175 KTSILTDTIINQKGKDVICIYVAIGQKRSTVAQLVSTFEEFG-AMDYTIVVSATASESAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP     I E F   G +VL++ D +++ A + RE++      P    YP  VF  
Sbjct: 234 LQYLAPYAGAAIGEEFMYNGKHVLIVYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +   G++TA+  +     +    I  +V SI DG I L   L   G 
Sbjct: 294 HSRLLERAAKLSDDLGGGSMTALPVIETQAGDVAAYIPTNVISITDGQIYLQPELFYAGV 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P VDP  SVSR+   A     KK+  +L     ++ E
Sbjct: 354 RPAVDPGISVSRVGGSAQIKSMKKIAGTLKLAYSQYRE 391


>gi|166836568|gb|ABY90516.1| ATP synthase beta chain [Salvinia minima]
          Length = 383

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 141/270 (52%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 97  GNDLYIEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKDGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   ++  
Sbjct: 215 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 273

Query: 373 --VSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 274 DTAQGVKETLQRYKELQDIIAI----PGLD 299


>gi|149384491|gb|ABR25068.1| ATP synthase beta chain [Arachniodes aristata]
          Length = 426

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|170729218|ref|YP_001763244.1| F0F1 ATP synthase subunit alpha [Shewanella woodyi ATCC 51908]
 gi|226739940|sp|B1KQ36|ATPA_SHEWM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169814565|gb|ACA89149.1| ATP synthase F1, alpha subunit [Shewanella woodyi ATCC 51908]
          Length = 513

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   SL  GD V   GR    P      GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAVVMGPYASLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + R+ V++  +TG + +D   P+  GQR  +     IGK+ L 
Sbjct: 122 DNDGFSPVEMIA--PGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   VG++   +   +   E++    L  ++VVVAT+ E+  L+ +
Sbjct: 180 IDAIINQKDTGIKCVYVAVGQKASTIANVVRKLEEH--GALANTIVVVATASEAAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE 402


>gi|149384617|gb|ABR25131.1| ATP synthase beta chain [Polystichum yunnanense]
          Length = 426

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 151/306 (49%), Gaps = 22/306 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDI 389
           +E +DI
Sbjct: 331 KELQDI 336


>gi|46360718|gb|AAS89140.1| ATP synthase beta subunit [Schistochila appendiculata]
          Length = 382

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  D S    + +  PA  +   +   F+TGI+V D+  P  
Sbjct: 2   LGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVXDLLAPYR 58

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 59  RGGKIGSFGGAGVGKTXLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118

Query: 211 GDNLKKSVVVVATS--DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V +     +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 119 EQNISESKVALGYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GYP ++ +E+  L ERI  +  ++G+IT++ +  V            
Sbjct: 179 EVSALLGRMPSAVGYPPTLSTEMGTLQERI--TSTKEGSITSIQAXYVPAGXXTXSXPGX 236

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
               L    VL+R LA EG YP VDPL S S +  + W   E+  +    +   + R++E
Sbjct: 237 TFXXLXATTVLSRGLAGEGNYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 296 LQDIIAILG 304


>gi|312285247|gb|ADQ64365.1| ATP synthase beta subunit [Orthomene hirsuta]
          Length = 359

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 140/277 (50%), Gaps = 21/277 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR  N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 82  GVTLGRFFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKFSIFETGIQVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 352


>gi|156739792|gb|ABU93549.1| ATP synthase beta subunit [Ctenitis eatonii]
          Length = 394

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V +     +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVHGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|253742525|gb|EES99353.1| Vacuolar ATP synthase subunit B [Giardia intestinalis ATCC 50581]
          Length = 497

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 29/297 (9%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGI 149
            ++  S    GR ++  G+ IDG    G   L+ EI      ++N   R+  +   +TGI
Sbjct: 91  MKVGVSRALLGRTLSGAGEIIDG----GAPVLAEEIRDIEGSSLNPVSREYPKNCLETGI 146

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD--CF----------------DKVI 191
             IDI T +C GQ+I + +GSG+  + LL+  AR+   C                 DK +
Sbjct: 147 STIDILTSICQGQKILLLSGSGLPYNPLLAQIARNARVCVPWEKAAAGGEVQVSEDDKFM 206

Query: 192 ISLVG-ERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-S 247
           I   G     E   F +        L +SV+++  + +  + R   P  AVTIAEYF+ +
Sbjct: 207 IVFAGIGLSHEQAMFFKTQFEQTGALNRSVILLNLASDPVVQRISTPRIAVTIAEYFAYT 266

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G +VL++L  I  +A ++R+I++   E+P  +GYP  ++S+L  + ER G     KG+I
Sbjct: 267 LGYHVLVLLSDIFNYADALRQISSARNEVPGRKGYPPYLYSDLSTIYERAGRVHGIKGSI 326

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           T +  + +  D+    IAD    I +G I  +R L  +   P VDPL S+SRL   A
Sbjct: 327 TQIPLITLPNDDITHIIADLSAFITEGQIFQDRKLFNKNIVPAVDPLPSLSRLQKSA 383


>gi|29726148|gb|AAD00600.2| ATP synthase beta subunit [Platystemon californicus]
          Length = 484

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 171/365 (46%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   E +  G D++       +       GR
Sbjct: 36  KSRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMDVIDTGAPLSVPXXEATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI V+D+  P   G 
Sbjct: 96  IFNVLGEPVD---NLGPVDTCTTFPIHRSAPAFIQLDTKLSIFETGIXVVDLLAPXRRGG 152

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           + G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 153 KXGLFGGAGVGKTVLIMELIXNIAKGHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 212

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 213 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 272

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 273 ALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 330

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R++E +DI
Sbjct: 331 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETSQRYKELQDI 390

Query: 390 RLIGG 394
             I G
Sbjct: 391 IAILG 395


>gi|156739694|gb|ABU93500.1| ATP synthase beta subunit [Polystichum luctuosum]
          Length = 394

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 152/310 (49%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +     + +E       +   + R++
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIAGEEHYDTAQGVKQTLQRYK 328

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 329 ELQDIIAILG 338


>gi|300858265|ref|YP_003783248.1| ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685719|gb|ADK28641.1| ATP synthase alpha chain [Corynebacterium pseudotuberculosis FRC41]
 gi|302205986|gb|ADL10328.1| F0F1 ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           C231]
 gi|302330539|gb|ADL20733.1| F0F1 ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           1002]
 gi|308276221|gb|ADO26120.1| F0F1 ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           I19]
          Length = 542

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 176/373 (47%), Gaps = 24/373 (6%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD  +I  V +G  E +  GD V   G    I     + GRVIN LG+PIDG  ++ + 
Sbjct: 68  NLDTDHIGVVVLGNYESLKEGDEVKRTGEVLSIPVGDNFLGRVINPLGQPIDGLGAI-EA 126

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TL 177
           +    +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK+     T+
Sbjct: 127 EEQRVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCIDTI 186

Query: 178 LSMFARSDCFDKV-----IISLVGERGR---EVREFIEDYLGDNLKKSVVVVATSDESPI 229
           L+  A  +  DK      I   +G++G     VR+ +E+     L+ + +V A + +S  
Sbjct: 187 LNQKANWESGDKTKQVRCIYVAIGQKGSTIAAVRKTLEEQ--GALEYTTIVAAPASDSAG 244

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
            + +AP     + +++  +G++VL+I D +T+ A + R I+      P    YP  VF  
Sbjct: 245 FKWLAPFAGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYL 304

Query: 290 LPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      E   G++TA+  +    ++ +  I  +V SI DG + L   L  +G 
Sbjct: 305 HSRLLERAAKLSDEMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGV 364

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      +
Sbjct: 365 RPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFATFASDLDAASKAQL 421

Query: 408 HQVPIIYDFLKQS 420
            +   + + LKQ+
Sbjct: 422 DRGARLVELLKQA 434


>gi|257852956|gb|ACV71489.1| ATP synthase beta subunit [Lozania pittieri]
          Length = 361

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 19  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 78

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 79  GNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 138

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 139 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 196

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 197 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYE 256

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 257 TAQRVKQTLQRYKELQDIIAILG 279


>gi|213585980|ref|ZP_03367806.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 268

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 95/160 (59%), Gaps = 12/160 (7%)

Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154
              GRV++  GKP+DG    D+L  G L        PP   + R  +E   +TG+R I+ 
Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLETGVRAINA 168

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213
              +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG D 
Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
             +SVV+ A +D SP+LR      A  IAE F  +G +VL
Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVL 268


>gi|29726146|gb|AAD00599.2| ATP synthase beta subunit [Hypecoum imberbe]
          Length = 491

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 148/309 (47%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D          S  I    P  +          TGI+V+D+  P 
Sbjct: 97  GATLGRIFNVLGEPVDNLXXXXXXXXS-PIHRSAPAFIQLDTKLSIXXTGIKVVDLLAPY 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 156 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 215

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 216 NEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQAG 275

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V  D+  DP   
Sbjct: 276 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSVQAVYVPADDLTDPAPA 333

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 334 TTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 393

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 394 LQDIIAILG 402


>gi|33151290|ref|NP_872643.1| F0F1 ATP synthase subunit alpha [Haemophilus ducreyi 35000HP]
 gi|81578260|sp|Q7VPP2|ATPA_HAEDU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33147510|gb|AAP95032.1| ATP synthase alpha chain [Haemophilus ducreyi 35000HP]
          Length = 513

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGEIDNDGFSPVEVIA--PGVIDRQSVDQPVQTGYKAVDSMVPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK++L+  ++ A+ D   K I   +G++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTSLVIDAIIAQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G      G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERAARVNAEYVERFTNGAVTGRTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|156069299|gb|ABU44853.1| ATP synthase beta subunit [Dryopteris maximowiczii]
          Length = 394

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 164/341 (48%), Gaps = 33/341 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+   LK+S
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYM--ELKES 148

Query: 218 VV-------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            V             V     E P  R     TA+T+AEYF      +V L +D+I RF 
Sbjct: 149 KVINEQNISESKVALVYGQMXEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFV 208

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 209 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 266

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + 
Sbjct: 267 APATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQ 325

Query: 382 RFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           R++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 326 RYKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 362


>gi|212637835|ref|YP_002314360.1| F0F1 ATP synthase subunit alpha [Shewanella piezotolerans WP3]
 gi|226739939|sp|B8CVU7|ATPA_SHEPW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|212559319|gb|ACJ31773.1| ATP synthase F1, alpha subunit [Shewanella piezotolerans WP3]
          Length = 513

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   +L  GD V   GR    P      GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAVVMGPYATLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + R+ V++  +TG + +D   P+  GQR  +     IGK+ L 
Sbjct: 122 DSDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   VG++   +   +   E++    L  ++VVVAT+ E+  L+ +
Sbjct: 180 IDAIINQKDSGIKCVYVAVGQKASTIANVVRKLEEH--GALANTIVVVATASEAAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYSGCTMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 298 LERSSRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|158602271|gb|ABW74602.1| ATP synthase beta subunit [Halerpestes cymbalaria]
          Length = 476

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 153/303 (50%), Gaps = 20/303 (6%)

Query: 107 NALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           N LG+P++   +LG  D   +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 NVLGEPVE---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ 
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 218

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++  
Sbjct: 219 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 396

Query: 392 IGG 394
           I G
Sbjct: 397 ILG 399


>gi|149384621|gb|ABR25133.1| ATP synthase beta chain [Stigmatopteris lechleri]
          Length = 426

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 37  TTLGRISNVLGEPVDNLGPVRSG-ATFPIHRPAPAFTQLDTKLLIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+  G+G+GK T+L+M + ++         +   VGER RE  +   +     + 
Sbjct: 96  RGGKIGLLGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|27435871|gb|AAO13260.1| ATP synthase beta subunit [Ephedra sinica]
          Length = 365

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 88

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 89  GNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKK 371
           V V  D+  DP   +  + LD   VL R LA +G YP VDPL S S  L  +       +
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLCRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYE 266

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
           +   +   + R++E +DI  I G
Sbjct: 267 IAQEVKQTLQRYKELQDIIAILG 289


>gi|237783981|gb|ACR19787.1| ATP synthase CF1 beta subunit [Lycium deserti]
 gi|237783989|gb|ACR19791.1| ATP synthase CF1 beta subunit [Phrodus microphyllus]
 gi|237783991|gb|ACR19792.1| ATP synthase CF1 beta subunit [Grabowskia glauca]
 gi|312369847|gb|ADQ74303.1| ATP synthase CF1 beta subunit [Grabowskia boerhaviifolia]
 gi|312369867|gb|ADQ74313.1| ATP synthase CF1 beta subunit [Lycium americanum]
          Length = 363

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + YL           N  +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYLEMKESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|149384623|gb|ABR25134.1| ATP synthase beta chain [Stigmatopteris longicaudata]
          Length = 424

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 37  TTLGRISNVLGEPVDNLGPVRSG-ATFPIHRPAPAFTQLDTKLLIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+  G+G+GK T+L+M + ++         +   VGER RE  +   +     + 
Sbjct: 96  RGGKIGLLGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVI 154

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|294055641|ref|YP_003549299.1| ATP synthase F1, beta subunit [Coraliomargarita akajimensis DSM
           45221]
 gi|293614974|gb|ADE55129.1| ATP synthase F1, beta subunit [Coraliomargarita akajimensis DSM
           45221]
          Length = 473

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N  G  +D    +   +     + ++PP +  Q  E    +TGI+VID+  P   G
Sbjct: 91  GRIFNVTGDTVDERGPVATDE--RRPIHRMPPELIDQATEAEILETGIKVIDLICPFTKG 148

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            ++G F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 149 GKVGAFGGAGVGKTVVIMELINNIAKAHGGYSVFAG-VGERSREGNDLYHEMSDAGVIDQ 207

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           +N+  S V  V    +E P  R    L+ +T+AEYF   K  +VLL +D+I RF+ +  E
Sbjct: 208 ENIANSKVALVYGQMNEPPGARMRVALSGLTMAEYFRDEKNQDVLLFVDNIFRFSQAGAE 267

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G  P A GY  ++ +E+  L ERI  +  +KG+IT+  +V V  D+  DP   + 
Sbjct: 268 VSALLGRSPSAVGYQPTLANEMGNLQERI--TSTKKGSITSFQAVYVPADDLTDPAPANT 325

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD  IVL RS+AE G YP VDPLAS+S   D A   +E  K+   + +++ R+ + +
Sbjct: 326 FAHLDSTIVLERSIAELGIYPAVDPLASISNALDPAIVGEEHYKVARGVQNVLQRYNDLQ 385

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 386 DIIAILG 392


>gi|149798695|gb|ABR32038.1| ATP synthase beta chain [Hemionitis palmata]
          Length = 385

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 151/307 (49%), Gaps = 24/307 (7%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 58  KIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 116

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 117 NISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 176

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 177 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 234

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 235 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 293

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 294 DIIAILG 300


>gi|20269404|gb|AAM17929.1| ATP synthase beta subunit [Clethra barbinervis]
          Length = 472

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 156/310 (50%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG+ D  +   + K  PA  +   +   F T I+V+ +  P
Sbjct: 89  ATLGRIFNVLGEPVD---NLGRVDTRTTSPIHKXAPAFIQLDTKLAIFXTEIKVVXLLAP 145

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G++ G+F G+G+G + L+     +       +S+ G  G   R+  + Y+       
Sbjct: 146 YPRGEKXGLFGGAGVGXTXLIMELINNIAKAHGGVSVFGXVGXRTRKGNDLYMKMKEXGV 205

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 206 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 265

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 266 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 323

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++
Sbjct: 324 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 383

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 384 ELQDIIAILG 393


>gi|77964179|gb|ABB13424.1| ATP synthase subunit alpha [Clostridium paradoxum]
          Length = 504

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 172/374 (45%), Gaps = 20/374 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G  E I  GD V   GR    P      GRV+NALG+PIDG   
Sbjct: 61  GMALNLEEDFVGAVLLGSDENIKEGDTVKRTGRIVEVPVGDALLGRVVNALGQPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + K D    I ++ P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+++ 
Sbjct: 121 I-KADKFRPIETQAPGIIERKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTSIA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPIL 230
           +         D + I + +G++   V + +     D L+K      ++VV AT+ E   L
Sbjct: 180 IDTIINQKGKDVICIYVAIGQKRSTVAQIV-----DRLEKYGAMDYTIVVSATASELAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + MAP +   + E F  +G +VL+I D +++ A + R ++      P    YP  VF   
Sbjct: 235 QYMAPYSGCAMGEEFMHQGKHVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLH 294

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 295 SRLLERAAKLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYSGVR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+P  SVSR+   A     KK+  +L      + + R+++    +   +D    + + 
Sbjct: 355 PAVNPGISVSRVGGNAQIKAMKKVAGTLK---LGYAQYRELQAFAQFGSDLDKDTRERLA 411

Query: 409 QVPIIYDFLKQSPS 422
           Q   I + LKQ+ +
Sbjct: 412 QGERIVEVLKQAET 425


>gi|156739758|gb|ABU93532.1| ATP synthase beta subunit [Dryopteris sieboldii]
          Length = 394

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD    L R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTALPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 328 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 362


>gi|257852990|gb|ACV71506.1| ATP synthase beta subunit [Soyauxia floribunda]
          Length = 378

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 88

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 89  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 266

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 267 TAQRVKQTLQRYKELQDIIAILG 289


>gi|157272381|gb|ABV27017.1| ATP synthase beta chain [Salvinia minima]
          Length = 384

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 141/270 (52%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 38  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 97

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 98  GNDLYIEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 157

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 158 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKDGSITSIQA 215

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   ++  
Sbjct: 216 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 274

Query: 373 --VSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 275 DTAQGVKETLQRYKELQDIIAI----PGLD 300


>gi|11908162|gb|AAD11709.2| ATP synthase beta subunit [Samadera baileyana]
          Length = 488

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               G + N LG+P+D   +LG  B  +   + K  PA  +   +   F+TGI+V+++  
Sbjct: 95  GATLGXIFNVLGEPVD---NLGPVBTRTTSPIHKPAPAFIQLDTKLSIFETGIKVLNLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD---- 212
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G    E  + Y+      
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGXGEXTXEGNDLYMEXTESG 211

Query: 213 -----NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + NVLL + +I RF  
Sbjct: 212 VINEXNIAZSKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQNVLLFIXNIFRFVQ 271

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLNTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 390 KELQDIIAILG 400


>gi|156739788|gb|ABU93547.1| ATP synthase beta subunit [Bolbitis appendiculata]
          Length = 394

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 160/339 (47%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N  G+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRIFNVPGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNL 214
              G +IG   G+G+GK+  +  S+   +     V +S  VGER RE  +   +     +
Sbjct: 91  YRRGGKIGSLGGAGVGKTVPITESINNIAKAHGGVSVSAGVGERTREGNDLYMEMRESKV 150

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R     T  T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTGPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R  A +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 328 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 362


>gi|6724289|gb|AAB51734.2| ATP synthase beta chain [Botrychium lunaria]
          Length = 386

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 159/313 (50%), Gaps = 26/313 (8%)

Query: 104 RVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           R+ N LG+P+D    LG  D +    + K  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 1   RIFNVLGEPVD---DLGPVDANETSPIHKPAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 57

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL--- 214
            +IG+F G+G+GK T+L+M + ++         +   VGER RE  +   +     +   
Sbjct: 58  GKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVINE 116

Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +ESP  R    LTA T+AEY       +VLL++D+I RF  +  E
Sbjct: 117 QNISESKVALVYGQMNESPGARMRVGLTAPTMAEYSRDVNKQDVLLLIDNIFRFVQAGSE 176

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 177 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 234

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            +  D   V +R LA +G +P VDPL S S ++      +E  +    +   + R++E +
Sbjct: 235 SAHPDATTVPSRGLAAKGIHPAVDPLDSTSTMSQPGIVGEEHYETAQGVKQTLQRYKEPQ 294

Query: 388 DIRLIGGYRPGVD 400
           DI  I    PG+D
Sbjct: 295 DIIAI----PGLD 303


>gi|308071149|ref|YP_003872754.1| ATP synthase subunit alpha [Paenibacillus polymyxa E681]
 gi|305860428|gb|ADM72216.1| ATP synthase alpha chain (Vegetative protein 100) [Paenibacillus
           polymyxa E681]
          Length = 504

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 7/341 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           LG  + +    V +  +G   +I  G  V   G+    P      GRV+N LG+P+DG  
Sbjct: 60  LGLALNVEESNVGVVILGQFSDIREGGQVKRTGQIMQVPVGEALIGRVVNPLGQPVDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +    + S+ P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+++
Sbjct: 120 PIATTEFR-PVESQAPGVMARKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTSI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
              ++  +     K I   +G++   V + +E       L+ ++VV A++ E   L  +A
Sbjct: 179 AIDAILNQKGNGMKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPSPLLYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +   + EYF  KG++VL++ D +T+ A + RE++      P    YP  VF    RLL
Sbjct: 239 PYSGCAMGEYFMYKGEHVLVVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++
Sbjct: 299 ERAAKLNDELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLEADLFYAGQRPAIN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              SVSR+   A     KK+  SL   + ++ E +     G
Sbjct: 359 VGISVSRVGGSAQIKAMKKVAGSLRLDLAQYRELQAFSQFG 399


>gi|149384509|gb|ABR25077.1| ATP synthase beta chain [Dryopteris crassirhizoma]
          Length = 426

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   V +R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|302880127|ref|YP_003848691.1| ATP synthase F1, alpha subunit [Gallionella capsiferriformans ES-2]
 gi|302582916|gb|ADL56927.1| ATP synthase F1, alpha subunit [Gallionella capsiferriformans ES-2]
          Length = 513

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 196/440 (44%), Gaps = 46/440 (10%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           +N E L Q   +         G + S+T     V  LS  V  G+ +   G   +  G  
Sbjct: 17  ENFEALTQARTE---------GTVVSVTDGIVRVYGLSD-VMQGEMLEFPG---NTFGLA 63

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGK 121
           + +  D V    +G  E I+ GD V   GR    P     CGRV+NALG+PIDG     K
Sbjct: 64  LNLERDSVGAVILGEYEHITEGDTVKCTGRILEVPVGPELCGRVVNALGQPIDG-----K 118

Query: 122 GDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           G ++ ++  K+    P  + RQ V++  +TG++ ID   P+  GQR  +      GK+ +
Sbjct: 119 GPINAKMTDKIEKVAPGVIERQSVDQPVQTGLKSIDAMVPVGRGQRELIIGDRQTGKTAV 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRK 232
              ++  +       I   +G++   V   +   E++    L  ++VV AT+ +S  ++ 
Sbjct: 179 AIDAIINQKGQGITCIYVAIGQKASTVVNVVRKLEEH--GALGYTIVVAATASDSAAMQF 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 237 LAPYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 296

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 297 LLERAARVNVEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 356

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++   R++     +   +
Sbjct: 357 TDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQY---RELAAFAQFASDL 413

Query: 400 DLILDKAVHQVPIIYDFLKQ 419
           D    K + +  ++ + +KQ
Sbjct: 414 DEATRKQLERGKLVTELMKQ 433


>gi|46360649|gb|AAS89106.1| ATP synthase beta subunit [Aneura pinguis]
          Length = 382

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 141/270 (52%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 44  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 103

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R     TA+T+AEYF      +V
Sbjct: 104 GNDLYMEMKESKVINEQNIAESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDV 163

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 164 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQA 221

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 222 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 280

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +    +   + R++E +DI  I    PG+D
Sbjct: 281 ETAQGVKQTLQRYKELQDIIAI----PGLD 306


>gi|257438172|ref|ZP_05613927.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
 gi|257199371|gb|EEU97655.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
          Length = 506

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 151/325 (46%), Gaps = 11/325 (3%)

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           VGI E    G  V   G+    P      GRV+NALG+PIDG   +   +    I S  P
Sbjct: 80  VGIKE----GSTVKRTGKVVSVPVGEAMIGRVVNALGQPIDGAGPIETTEFRA-IESPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFARSDCFDKVII 192
             ++RQ V++  +TGI+ ID   P+  GQR  +      GK+T+ S         D + I
Sbjct: 135 GIIDRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIASDTIINQKGKDVICI 194

Query: 193 SL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G++   V   ++       +  ++VV AT+ E   L+ +AP +   + EYF  +G 
Sbjct: 195 YVAIGQKRSTVANLVQSLTEAGAMSYTIVVSATASELSPLQYIAPYSGCAMGEYFMHQGK 254

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           +VL+I D +++ A + R ++      P    YP  VF    RLLER      E   G++T
Sbjct: 255 HVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRLLERAAKLSNELGGGSLT 314

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P V+P  SVSR+   A    
Sbjct: 315 ALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMPAVNPGISVSRVGGNAQIKA 374

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIG 393
            KK+  +L  +  ++ E +     G
Sbjct: 375 MKKVAGTLKLIYSQYRELQSFAQFG 399


>gi|257852988|gb|ACV71505.1| ATP synthase beta subunit [Medusandra richardsiana]
          Length = 368

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 88

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 89  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 266

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 267 TAQRVKQTLQRYKELQDIIAILG 289


>gi|311740605|ref|ZP_07714432.1| ATP synthase F1 sector alpha subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311304125|gb|EFQ80201.1| ATP synthase F1 sector alpha subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 557

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 176/377 (46%), Gaps = 28/377 (7%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   I  V +G  E +  GD V   G    I     + GRVIN LG+PIDG   +G  
Sbjct: 79  NLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDG---MGPI 135

Query: 123 DLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS----- 175
           +   E  +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK+     
Sbjct: 136 NAEEERVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCID 195

Query: 176 TLLSMFARSDCFDK-----VIISLVGERGRE---VREFIEDYLGDNLKKSVVVVATSDES 227
           T+L+  A  +  DK      I   +G++G     VR  +E++    L  + +V A + +S
Sbjct: 196 TILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRRTLEEH--GALDYTTIVAAPASDS 253

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
              + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF
Sbjct: 254 AGFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVF 313

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +    ++    I  +V SI DG + L   L  +
Sbjct: 314 YLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVGAFIPTNVISITDGQVFLESDLFNQ 373

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D     
Sbjct: 374 GVRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLASY---RDLQAFAAFASDLDAASKA 430

Query: 406 AVHQVPIIYDFLKQSPS 422
            + +   + + LKQS S
Sbjct: 431 QLERGSRLVELLKQSES 447


>gi|6017834|gb|AAF01651.1| ATP synthase beta subunit [Houttuynia cordata]
 gi|33327751|gb|AAQ09239.1| ATP synthase beta subunit [Houttuynia cordata]
          Length = 491

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 142 FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 201

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 202 GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 261

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 262 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 320 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 379

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +     R++E +DI  I G
Sbjct: 380 TAQRVKQTSQRYKELQDIIAILG 402


>gi|148242977|ref|YP_001228134.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. RCC307]
 gi|166201683|sp|A5GV72|ATPA_SYNR3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|147851287|emb|CAK28781.1| ATP synthase alpha chain [Synechococcus sp. RCC307]
          Length = 505

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 177/386 (45%), Gaps = 14/386 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q  EDY K++ V   G +  +      V  L + V  G+ VV +       G  + + 
Sbjct: 13  LKQQIEDYDKSVSVSNVGTVLQVGDGIARVYGLDK-VMAGELVVFEDGTE---GLALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G G  I  G  V   G+    P      GRV+N LG+P+DG   +   D+ 
Sbjct: 69  DDNVGVVLMGEGYGIQEGSTVKATGKIASVPVGEAMLGRVVNPLGQPMDGKGEIASTDVR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARS 184
           + I +  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ + +      
Sbjct: 129 L-IENPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 187

Query: 185 DCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTI 241
              D V + + +G++   V +  E  L +   L  +V+V A + E+  L+ +AP T   I
Sbjct: 188 KSEDVVCVYVAIGQKAASVAQVTE-VLRERGALDYTVIVAAGASEAASLQYLAPYTGAAI 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--P 299
           AE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER     
Sbjct: 247 AEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKLS 306

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVSR
Sbjct: 307 DAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEE 385
           +   A +   KK+  +L   + +F+E
Sbjct: 367 VGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|65332602|gb|AAY42225.1| ATP synthase beta subunit [Anisophyllea manausensis]
          Length = 374

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 26  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 85

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 86  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 145

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 146 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 203

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 204 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 263

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 264 TAQRVKQTLQRYKELQDIIAILG 286


>gi|42558312|gb|AAS19865.1| ATP synthase beta chain [Ceradenia pilipes]
          Length = 422

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 152/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +      I    P           F+TGI+V+D+  P  
Sbjct: 74  LGRISNVLGEPVD---NLGPVRSSAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 131 RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 189

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 190 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 249

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP + 
Sbjct: 250 SEVSALLGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPASA 307

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 308 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 366

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 367 ELQDIIAILG 376


>gi|18075720|emb|CAD11277.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP   V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYAGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|328681701|gb|AEB32923.1| ATP synthase beta subunit [Bazzania trilobata]
          Length = 380

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 140/265 (52%), Gaps = 19/265 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 35  FETGIKVVDLSAPYRRGGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTR 93

Query: 201 E----VREFIEDYLGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E      E  E  + D  N+ +S V  V    +E P  R    LTA T+AEYF      +
Sbjct: 94  EGNDLYMEMKESKVIDEQNISESKVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQD 153

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ 
Sbjct: 154 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQ 211

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+ 
Sbjct: 212 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEH 270

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 271 YETAQGVKQTLQRYKELQDIIAISG 295


>gi|328681639|gb|AEB32892.1| ATP synthase beta subunit [Telaranea lindenbergii]
          Length = 378

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 150/294 (51%), Gaps = 19/294 (6%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F G+G+GK
Sbjct: 3   DNLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSFGGAGVGK 62

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV--VVAT 223
           + L+     +       +S+ G  G   RE  + Y+           N+ +S V  V   
Sbjct: 63  TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQ 122

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 123 MNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 182

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 183 QPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 240

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           A +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 241 AAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 293


>gi|6688494|emb|CAB65139.1| ATP synthase beta subunit [Irvingbaileya sp. Plunkett 1510]
          Length = 383

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 34  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 93

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 94  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 153

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 154 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 211

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 212 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 271

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 272 TAQRVKQTLQRYKELQDIIAILG 294


>gi|156739750|gb|ABU93528.1| ATP synthase beta subunit [Dryopteris neolacera]
          Length = 394

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   V +R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 328 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 362


>gi|9799482|gb|AAF98991.1| ATP synthase beta subunit [Paeonia tenuifolia]
          Length = 378

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 152/301 (50%), Gaps = 20/301 (6%)

Query: 109 LGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393
             VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI  I 
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAIL 296

Query: 394 G 394
           G
Sbjct: 297 G 297


>gi|227832898|ref|YP_002834605.1| ATP synthase alpha chain [Corynebacterium aurimucosum ATCC 700975]
 gi|262182613|ref|ZP_06042034.1| F0F1 ATP synthase subunit alpha [Corynebacterium aurimucosum ATCC
           700975]
 gi|254807690|sp|C3PFR3|ATPA_CORA7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|227453914|gb|ACP32667.1| ATP synthase alpha chain [Corynebacterium aurimucosum ATCC 700975]
          Length = 546

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 178/376 (47%), Gaps = 26/376 (6%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL-GK 121
           NLD   I  V +G  E +  GD V   G    I     + GRVIN LG+PIDG   +  +
Sbjct: 68  NLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDGMGPITAE 127

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----T 176
            D  +E+  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK+     T
Sbjct: 128 EDRVLEL--QAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCIDT 185

Query: 177 LLSMFARSDCFDK-----VIISLVGERGRE---VREFIEDYLGDNLKKSVVVVATSDESP 228
           +L+  A  +  DK      I   +G++G     VR  +E +    L+ + +V A + ++ 
Sbjct: 186 ILNQKANWESGDKNKQVRCIYVAIGQKGSTIAGVRHTLEQH--GALEYTTIVAAPASDAA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFSGAALGQHWMYQGNHVLIIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLELAAY---RDLQAFAAFASDLDPASKAQ 420

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   + + LKQS S
Sbjct: 421 LERGERLVELLKQSES 436


>gi|90409881|ref|ZP_01217898.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
 gi|90329234|gb|EAS45491.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
          Length = 513

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 150/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+ IDG  ++     S +EI++  P  + RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQAIDGKGAIENDGYSPVEIIA--PGVIERQSVDQPIQTGYKAVDSMVPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ +   ++  + D   K +   +G++   +   +   E++  D LK 
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEH--DALKN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ ++  L+ +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASDAAALQYLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERASRVNVSYVERFTKGKVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLQTHLFNSGLRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|326328128|gb|ADZ54131.1| ATP synthase beta subunit [Bradyrhizobium japonicum]
          Length = 235

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREF 205
           D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE      EF
Sbjct: 1   DLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEF 60

Query: 206 IEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           IE  +  +          K  +V    +E P  R    LT +T+AE+F  +G +VL  +D
Sbjct: 61  IESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVD 120

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  
Sbjct: 121 NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPA 178

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           D+  DP   +  + LD   VL+R+++E+G YP VDPL S SR+
Sbjct: 179 DDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRM 221


>gi|323388501|gb|ADX60536.1| ATP synthase beta subunit [Allophylus arboreus]
          Length = 328

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 258

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 259 TAQRVKQTLQRYKELQDIIAILG 281


>gi|149384783|gb|ABR25200.1| ATP synthase beta chain [Thelypteris consanguinea]
 gi|149384815|gb|ABR25216.1| ATP synthase beta chain [Thelypteris rustica]
          Length = 426

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMS-KVPPAMNRQRVEKGF-KTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +    +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPTHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|331701227|ref|YP_004398186.1| ATP synthase subunit alpha [Lactobacillus buchneri NRRL B-30929]
 gi|329128570|gb|AEB73123.1| ATP synthase subunit alpha [Lactobacillus buchneri NRRL B-30929]
          Length = 518

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 155/342 (45%), Gaps = 11/342 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G    I  GD V   GR    P      GRV+N+LG+PIDG   
Sbjct: 61  GMVQNLETNDVGIMILGDDTNIREGDSVKRTGRIMEVPVGDEMIGRVVNSLGEPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D    I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+++ 
Sbjct: 121 I-KADDHKAIEHKAPGVMDRQSVFEPLQTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  +     K I   +G++   VR  +   E Y    +  + V+ A   E   L  +
Sbjct: 180 IDTILNQKGQNMKCIYVAIGQKQSTVRTAVSTLEKY--GAMDYTTVISAGPSEPASLLYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  KG +VL+I D +++ A + RE++      P    YP  +F    RL
Sbjct: 238 APYAGATMGEYFMHKGQHVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRL 297

Query: 294 LERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER    S+K   G++TA+  V     + +  I  +V SI DG I L+      G  P V
Sbjct: 298 LERAAKLSDKLGGGSMTAMPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAV 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           D   SVSR+   A     KK+  +L   +  + E       G
Sbjct: 358 DAGTSVSRVGGDAQVKAMKKVSGTLRLDLASYHELESFAQFG 399


>gi|251791746|ref|YP_003006467.1| F0F1 ATP synthase subunit alpha [Dickeya zeae Ech1591]
 gi|247540367|gb|ACT08988.1| ATP synthase F1, alpha subunit [Dickeya zeae Ech1591]
          Length = 513

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG PIDG     KG L  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGAPIDG-----KGPLEHDGFSPVETIAPGVIDRQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LSNTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    YP  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|149384805|gb|ABR25211.1| ATP synthase beta chain [Thelypteris oligocarpa]
          Length = 426

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMS-KVPPAMNRQRVEKGF-KTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +    +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPTHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|904085|gb|AAA84057.1| adenosine triphosphatase [Boquila trifoliolata]
          Length = 498

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG      +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPXXXXTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRXXXAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|307637803|gb|ADN80253.1| ATP synthase alpha chain [Helicobacter pylori 908]
 gi|325996401|gb|ADZ51806.1| ATP synthase alpha chain [Helicobacter pylori 2018]
 gi|325997989|gb|ADZ50197.1| ATP synthase alpha subunit [Helicobacter pylori 2017]
          Length = 503

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP   V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYAGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|328681697|gb|AEB32921.1| ATP synthase beta subunit [Mastigobryum limbatum]
          Length = 380

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GXPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD--NLKKS 217
            G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + D  N+ +S
Sbjct: 58  GGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQNISES 116

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|313889192|ref|ZP_07822846.1| ATP synthase ab C terminal domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312844746|gb|EFR32153.1| ATP synthase ab C terminal domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 474

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 168/336 (50%), Gaps = 16/336 (4%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISP 97
           + Y  L D  +  G+     G+VI I  D   +        I+L D  + F      +  
Sbjct: 24  AAYEELVDIELQNGEK--RRGRVIEIEGDKAMVQIFEGSSGINLKDTSVRFLGKPLELGV 81

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S    GRV + LG+PID    +   +  ++I       ++R    +  +TG+ VID    
Sbjct: 82  SPDMIGRVFDGLGEPIDDGPKIIPEE-KIDINGTAINPVSRDYPSEFIQTGVSVIDGLNT 140

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCF-----DKVIISLVGERGREVREFIEDYLGD 212
           L  GQ++ +F+ +G+  + L +  AR           V+ + +G    E + FI+D+   
Sbjct: 141 LVRGQKLPIFSEAGLPHNELAAQIARQATVLSGGDFAVVFAAMGITFEEAQYFIDDFTKT 200

Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             + ++V+ +  +++  I R   P  A+T AEY +  +G +VL+IL  +T +A ++RE++
Sbjct: 201 GAIDRAVLFMNLANDPAIERLATPKMALTAAEYLAFEQGKHVLVILTDMTNYAEALREVS 260

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV-ISVLVDGD-NHNDPIADSV 328
               E+P  RGYP  ++++L  + ER G  +  +G+IT + I  + +GD  H  PI D  
Sbjct: 261 AARKEVPGRRGYPGYLYTDLAGIYERAGRIKGREGSITQIPILTMPEGDITH--PIPDLT 318

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             I +G I+L+  L ++G  PP++ + S+SRL DK 
Sbjct: 319 GYITEGQIILSTQLFKQGLEPPINAIPSLSRLKDKG 354


>gi|157737831|ref|YP_001490515.1| F0F1 ATP synthase subunit alpha [Arcobacter butzleri RM4018]
 gi|315637621|ref|ZP_07892827.1| ATP synthase F1 sector alpha subunit [Arcobacter butzleri JV22]
 gi|166990353|sp|A8EV72|ATPA_ARCB4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157699685|gb|ABV67845.1| ATP synthase F1 sector, alpha subunit [Arcobacter butzleri RM4018]
 gi|315478075|gb|EFU68802.1| ATP synthase F1 sector alpha subunit [Arcobacter butzleri JV22]
          Length = 505

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 31/389 (7%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G GE +  G      G+   +P      GRV+NALG+PIDG  ++   +    +
Sbjct: 73  VGVVILGKGEGLREGTSCKRVGKLLETPVGEALVGRVVNALGEPIDGKGAIAATETRF-V 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      +   +
Sbjct: 132 EEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTILNQKGE 191

Query: 189 KVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VI   V  G++   +   +        +  ++VV A++ +S  L+ +AP T VTI EYF
Sbjct: 192 NVICIYVAIGQKSSSIASVVRTLEESGAMDYTIVVNASAADSSALQFLAPYTGVTIGEYF 251

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK- 304
              G + L+I D +++ A + RE++      P    YP  VF    RLLER      E+ 
Sbjct: 252 RDNGKHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKMSDERG 311

Query: 305 -GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +     +    I  +V SI DG I L  +L   G  P ++   SVSR+   
Sbjct: 312 AGSMTALPIIETQAGDVAAYIPTNVISITDGQIFLETNLFNSGIRPAINVGLSVSRVGGA 371

Query: 364 AWSADEKKLVSSLTHLIHRFEE---------------TRDI----RLIGGYRPGVD--LI 402
           A     K++  +L   + ++ E                R++    R++   + GV+  L+
Sbjct: 372 AQIKATKQVAGTLKLSLAQYRELEAFAQFASDLDEATRRELELGQRMVEVLKQGVNKPLV 431

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           ++K   Q+ IIY   K   +D++ +DV +
Sbjct: 432 IEK---QIVIIYAGTKGYLNDIAVKDVVR 457


>gi|156739732|gb|ABU93519.1| ATP synthase beta subunit [Arachniodes chinensis]
 gi|156739740|gb|ABU93523.1| ATP synthase beta subunit [Arachniodes speciosa]
          Length = 394

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 93  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 151

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 152 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 211

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 212 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 269

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++
Sbjct: 270 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYK 328

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 329 ELQDIIAILG 338


>gi|271502663|ref|YP_003335689.1| ATP synthase F1 subunit alpha [Dickeya dadantii Ech586]
 gi|270346218|gb|ACZ78983.1| ATP synthase F1, alpha subunit [Dickeya dadantii Ech586]
          Length = 513

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG PIDG     KG L  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGAPIDG-----KGPLEHDGFSAVETIAPGVIDRQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    YP  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|193212726|ref|YP_001998679.1| F0F1 ATP synthase subunit alpha [Chlorobaculum parvum NCIB 8327]
 gi|193086203|gb|ACF11479.1| alternate F1F0 ATPase, F1 subunit alpha [Chlorobaculum parvum NCIB
           8327]
          Length = 508

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 187/403 (46%), Gaps = 18/403 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + K L+++ Q  E +S +L +V+ G + ++ +    V  L   V   + V    +  +NL
Sbjct: 9   LDKALDSVRQAREGWSADLALVEEGVVRTVLNGIVKVDGLPG-VGYEELV----RFHENL 63

Query: 60  -GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G    I+   V +  +G    +  GD  +  GR    P      GRVI+ LG+P+D   
Sbjct: 64  YGIAFNIDPGEVGVVLLGDYARLRTGDRAWRTGRVTDVPVGEQLIGRVIDPLGQPLD--- 120

Query: 118 SLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            LG  K      I    PP M+R  V    +TGI+VID   P+  GQR  +      GK+
Sbjct: 121 ELGPVKTTKRWPIERPAPPIMDRDPVTVPLQTGIKVIDAIVPVGRGQRELILGDRQTGKT 180

Query: 176 TL-LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRK 232
           ++ LS        + + I     +           L D+  ++ ++V+V   ++ P L+ 
Sbjct: 181 SVALSAMINQRQNEVLCIYCAIGQKAASVAKAVAVLRDHGAMEHTIVLVTEGNDPPGLQY 240

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A +IAEYF  +G +VL++ D +T  A + RE++      P    +P  +F    R
Sbjct: 241 IAPYAATSIAEYFMQQGRDVLIVYDDLTNHARAYRELSLLLKRPPGREAFPGDIFYIHSR 300

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +E   G++TA+  +  +  N +  I  ++ SI DG + L+ +L E G  P 
Sbjct: 301 LLERATHLRRELGGGSLTALPIIETEAQNISAYIPTNLISITDGQLYLSPTLFELGILPA 360

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           VD   SVSR+  KA  A  + +  SL     +FEE  +    G
Sbjct: 361 VDIGKSVSRVGGKAQLAAYRAVTGSLKLAYAQFEELENFARFG 403


>gi|126701093|ref|YP_001089990.1| ATP synthase subunit alpha [Clostridium difficile 630]
 gi|254977094|ref|ZP_05273566.1| ATP synthase alpha chain [Clostridium difficile QCD-66c26]
 gi|255094422|ref|ZP_05323900.1| ATP synthase alpha chain [Clostridium difficile CIP 107932]
 gi|255102679|ref|ZP_05331656.1| ATP synthase alpha chain [Clostridium difficile QCD-63q42]
 gi|255308500|ref|ZP_05352671.1| ATP synthase alpha chain [Clostridium difficile ATCC 43255]
 gi|255316174|ref|ZP_05357757.1| ATP synthase alpha chain [Clostridium difficile QCD-76w55]
 gi|255518835|ref|ZP_05386511.1| ATP synthase alpha chain [Clostridium difficile QCD-97b34]
 gi|255652014|ref|ZP_05398916.1| ATP synthase alpha chain [Clostridium difficile QCD-37x79]
 gi|255657424|ref|ZP_05402833.1| ATP synthase alpha chain [Clostridium difficile QCD-23m63]
 gi|260684989|ref|YP_003216274.1| ATP synthase subunit alpha [Clostridium difficile CD196]
 gi|260688647|ref|YP_003219781.1| ATP synthase subunit alpha [Clostridium difficile R20291]
 gi|296449020|ref|ZP_06890810.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP08]
 gi|296879843|ref|ZP_06903816.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP07]
 gi|306521756|ref|ZP_07408103.1| ATP synthase alpha chain [Clostridium difficile QCD-32g58]
 gi|123066473|sp|Q180W8|ATPA_CLOD6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115252530|emb|CAJ70373.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
           sector subunit alpha) [Clostridium difficile]
 gi|260211152|emb|CBA66595.1| ATP synthase alpha chain [Clostridium difficile CD196]
 gi|260214664|emb|CBE07290.1| ATP synthase alpha chain [Clostridium difficile R20291]
 gi|296262113|gb|EFH08918.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP08]
 gi|296429132|gb|EFH15006.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP07]
          Length = 500

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 169/366 (46%), Gaps = 10/366 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  ++V    +G   EI  GD+V   GR    P      GRV+N+LG+PIDG   
Sbjct: 61  GMALNLEEEVVGAVILGDDSEIKEGDIVKRTGRIVEVPVGEALIGRVVNSLGQPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           +     +  + S+ P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+++ 
Sbjct: 121 IAYTK-TRPVESEAPGIIDRRSVYEPLQTGIKSIDSMIPIGRGQRELIIGDRQTGKTSIV 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAP 235
           +         D + I + +G++   + + +     G  L  ++VV AT+ ES  L+ +AP
Sbjct: 180 IDTILNQKGKDVICIYVAIGQKRSTIAQLVSSLEKGGALDYTIVVSATASESAPLQYIAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 240 YAGAAMGEEFMYNGKHVLIVYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P VDP
Sbjct: 300 RAAKLSDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIYLQPELFYSGVRPAVDP 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     KK+  +L      + + R++     +   +D    K + Q   I
Sbjct: 360 GISVSRVGGSAQIKAMKKVAGTLKLA---YSQYRELAAFSQFGSDLDEDTKKRLAQGERI 416

Query: 414 YDFLKQ 419
            + LKQ
Sbjct: 417 VEILKQ 422


>gi|317014520|gb|ADU81956.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Gambia94/24]
          Length = 503

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP   V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYAGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|157272369|gb|ABV27011.1| ATP synthase beta chain [Azolla nilotica]
          Length = 379

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 141/265 (53%), Gaps = 19/265 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 33  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMEPINNIAKAHGGVSVSGGVG-ERTR 91

Query: 201 E----VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E      E  E  +   +NL +S V  V    +E P  R    LTA+T+AEYF      +
Sbjct: 92  EGNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQD 151

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ 
Sbjct: 152 VLPFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQ 209

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADE 369
           +V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   A+ 
Sbjct: 210 AVYVPADDSTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEH 268

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 269 YETAQGVKQTLQRYKELQDIIAILG 293


>gi|149384793|gb|ABR25205.1| ATP synthase beta chain [Thelypteris gracilis]
          Length = 426

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMS-KVPPAMNRQRVEKGF-KTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +    +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPTHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|21633363|gb|AAM52156.1| ATP synthase beta subunit [Seddera arabica]
          Length = 485

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G ++G+F G+G+GK+ LL     +       +S+ G  G   RE
Sbjct: 142 FETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLLMELIHNIAKAHGGVSVFGGVGDPTRE 201

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+  S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 202 GNDLYMEMKESGVINEENIAXSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 261

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 262 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 320 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 379

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 380 TAQRVKQTLQRYKELQDIIAILG 402


>gi|13357610|ref|NP_077884.1| F0F1 ATP synthase subunit beta [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762398|ref|YP_001752133.1| F0F1 ATP synthase subunit beta [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920168|ref|ZP_02690932.2| ATP synthase F1, beta subunit homolog [Ureaplasma parvum serovar 1
           str. ATCC 27813]
 gi|183508480|ref|ZP_02689764.2| ATP synthase F1, beta subunit family [Ureaplasma parvum serovar 14
           str. ATCC 33697]
 gi|186701688|ref|ZP_02553348.2| ATP synthase F1, beta subunit family [Ureaplasma parvum serovar 6
           str. ATCC 27818]
 gi|11266607|pir||C82941 ATP synthase beta chain UU054 [imported] - Ureaplasma urealyticum
 gi|6899002|gb|AAF30459.1|AE002104_12 ATP synthase beta chain [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827975|gb|ACA33237.1| ATP synthase F1, beta subunit family [Ureaplasma parvum serovar 3
           str. ATCC 27815]
 gi|171902542|gb|EDT48831.1| ATP synthase F1, beta subunit homolog [Ureaplasma parvum serovar 1
           str. ATCC 27813]
 gi|182675900|gb|EDT87805.1| ATP synthase F1, beta subunit family [Ureaplasma parvum serovar 14
           str. ATCC 33697]
 gi|186700943|gb|EDU19225.1| ATP synthase F1, beta subunit family [Ureaplasma parvum serovar 6
           str. ATCC 27818]
          Length = 454

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 140/270 (51%), Gaps = 12/270 (4%)

Query: 136 MNRQRVEKGFK---TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS----MFARSDCFD 188
           +N + V+K  +   TGI+ ID F P+  G ++G+F G+G+GK+ L+        R    +
Sbjct: 110 LNERYVDKSIEIVETGIKAIDFFMPILKGYKLGIFGGAGVGKTVLMKEIIFNLNRHKQAN 169

Query: 189 KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             I    GER RE  E   +    NL   SV+ ++  +E+P  R       +T AEY   
Sbjct: 170 SNIFIGSGERSREAIELYNELTASNLMPNSVMFISKMNEAPGARTSIVPIGITAAEYLRD 229

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +  +NVLL +D+I RF  +  E++T  G+ P   GY +++ S++  +  R+     + G+
Sbjct: 230 QNKENVLLFIDNIYRFIQAENEVSTALGKKPSVGGYQSTLESDVTHIQNRL--FRNKNGS 287

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAW 365
           IT+  ++ +  D+ +DP A +V + LDG +VL+R+ A +  +P  DPLAS +   D K  
Sbjct: 288 ITSFQTIFLPMDDLSDPSAVAVFNHLDGKLVLSRAQAAKNIFPAFDPLASSTNAIDPKII 347

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
                  +     ++  +++  D+ LI G+
Sbjct: 348 GERHYNAIIETKKVLKAYKDLEDVILILGF 377


>gi|14718181|gb|AAK72829.1| ATP synthase beta subunit [Pilea cadierei]
          Length = 375

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 34  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 93

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 94  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 153

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 154 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 211

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 212 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 271

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 272 TAQRVKQTLQRYKELQDIIAILG 294


>gi|25808419|gb|AAN74336.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP   V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYAGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF  L RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYILSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|328681655|gb|AEB32900.1| ATP synthase beta subunit [Telaranea pulcherrima var. mooreana]
          Length = 380

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 150/294 (51%), Gaps = 19/294 (6%)

Query: 117 DSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           D+LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F G+G+GK
Sbjct: 5   DNLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSFGGAGVGK 64

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV--VVAT 223
           + L+     +       +S+ G  G   RE  + Y+           N+ +S V  V   
Sbjct: 65  TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQ 124

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 125 MNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 184

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 185 QPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 242

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           A +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 243 AAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 295


>gi|255324525|ref|ZP_05365642.1| ATP synthase F1, alpha subunit [Corynebacterium tuberculostearicum
           SK141]
 gi|255298431|gb|EET77731.1| ATP synthase F1, alpha subunit [Corynebacterium tuberculostearicum
           SK141]
          Length = 546

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 176/377 (46%), Gaps = 28/377 (7%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   I  V +G  E +  GD V   G    I     + GRVIN LG+PIDG   +G  
Sbjct: 68  NLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDG---MGPI 124

Query: 123 DLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS----- 175
           +   E  +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK+     
Sbjct: 125 NAEEERVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCID 184

Query: 176 TLLSMFARSDCFDK-----VIISLVGERGRE---VREFIEDYLGDNLKKSVVVVATSDES 227
           T+L+  A  +  DK      I   +G++G     VR  +E++    L  + +V A + +S
Sbjct: 185 TILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRRTLEEH--GALDYTTIVAAPASDS 242

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
              + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF
Sbjct: 243 AGFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVF 302

Query: 288 SELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +    ++    I  +V SI DG + L   L  +
Sbjct: 303 YLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVGAFIPTNVISITDGQVFLESDLFNQ 362

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D     
Sbjct: 363 GVRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLASY---RDLQAFAAFASDLDAASKA 419

Query: 406 AVHQVPIIYDFLKQSPS 422
            + +   + + LKQS S
Sbjct: 420 QLERGSRLVELLKQSES 436


>gi|149384797|gb|ABR25207.1| ATP synthase beta chain [Thelypteris linkiana]
          Length = 426

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMS-KVPPAMNRQRVEKGF-KTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +    +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPTHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|11558462|emb|CAC17755.1| ATP synthase subunit B [Fendlerella utahensis]
          Length = 386

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S  G  G   RE
Sbjct: 45  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSXFGGVGERTRE 104

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 105 GNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 164

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 165 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 222

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 223 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 282

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 283 TAQRVKQTLQRYKELQDIIAILG 305


>gi|85860961|ref|YP_463163.1| F0F1 ATP synthase subunit alpha [Syntrophus aciditrophicus SB]
 gi|124007205|sp|Q2LY34|ATPA2_SYNAS RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|85724052|gb|ABC78995.1| F0F1-type ATP synthase, alpha subunit [Syntrophus aciditrophicus
           SB]
          Length = 519

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 13/336 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           LG V  ++LD + I  +   E+IS G  V   GR    P      GRV++ +G+P+D   
Sbjct: 70  LGLVFNVDLDEIGIITLDHTEDISAGSAVRRTGRVLDVPVGEALLGRVLDPMGRPLDNRG 129

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +      + +  + P  M+R  V    +TGI+VID    +  GQR  +      GK+ +
Sbjct: 130 EVAAAR-RLPLEREAPAVMDRAPVSVPLQTGIKVIDSLIAIGRGQRELILGDRQTGKTAI 188

Query: 178 LSMFARSDCFDKVIISLVGERGRE------VREFIEDYLGDNLKKSVVVVATSDESPILR 231
           + +    +  DK +I +    G++      V   +E +    L   ++VVA  ++ P L+
Sbjct: 189 I-LDTIINQHDKNVICIYCAIGKQSADTARVVSVLESF--RTLPYCIIVVAAGEDPPGLQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A ++ EYF  +G +VL+I D +TR A + RE++      P    YP  +F    
Sbjct: 246 YIAPYAATSMGEYFMKRGKDVLVIYDDLTRHARAYRELSLLLRRPPGREAYPGDIFYIHA 305

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           R+LER     +E   G++TA+  +  +  + +  I  ++ SI DG I L+  L ++G  P
Sbjct: 306 RMLERATHLREELGGGSLTAIPIIETEAQDISAYIPTNLISITDGQIYLSSRLFQKGILP 365

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +D   SVSR+  K      + +   L     +FEE
Sbjct: 366 AIDVGKSVSRVGGKTQLPAYRTVAGDLRLSYSQFEE 401


>gi|150015306|ref|YP_001307560.1| F0F1 ATP synthase subunit alpha [Clostridium beijerinckii NCIMB
           8052]
 gi|189081292|sp|A6LQH4|ATPA_CLOB8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149901771|gb|ABR32604.1| ATP synthase F1, alpha subunit [Clostridium beijerinckii NCIMB
           8052]
          Length = 504

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 158/333 (47%), Gaps = 17/333 (5%)

Query: 65  INLDIVYICPVGIGEE--ISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK 121
           +NL+   +  V +GEE  I  GD V   GR    P      GRV+NALG+PIDG     K
Sbjct: 64  LNLEQDNVGCVLLGEEKGIKEGDTVKGTGRVVEVPVGEAMIGRVVNALGEPIDG-----K 118

Query: 122 GDLSMEIMS--KVPPA--MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           G +S       ++P A  ++R  V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 119 GPISTSQTRAIEIPAAGIIDRSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAI 178

Query: 178 -LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDESPILRKMA 234
            +         D + I +   + +     I + L +   +  S+VV AT+ ES  L+ MA
Sbjct: 179 AIDTILNQKGKDVICIYVAIGQKQSTVAHIFNTLTEMGAMDYSIVVSATASESAPLQYMA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  TI EYF  +G +VL+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 239 PYSGCTIGEYFMHQGKDVLIIYDDLSKHATAYRAMSLLLKRPPGREAYPGDVFYIHSRLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     KE   G+ITA+  +     +    I  +V SI DG I L   L   G+ P V+
Sbjct: 299 ERAAKLSKELGGGSITALPIIETQAGDVTAYIPTNVISITDGQIFLESDLFNAGQRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A     K++  +L   + ++ E
Sbjct: 359 AGISVSRVGGSAQIKAMKQVSGTLRLELAQYRE 391


>gi|6425061|gb|AAF08281.1|AF189779_1 vacuolar ATP synthase subunit B K form [Carcinus maenas]
 gi|7677489|gb|AAF67183.1|AF247971_1 vacuolar ATP synthase subunit B L form [Carcinus maenas]
          Length = 489

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 170/374 (45%), Gaps = 30/374 (8%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV----------VHQGKNSDNLGQVIRIN--L 67
            VQ  YI+     Y TVT ++  + + D V          +H    ++  GQV+ ++   
Sbjct: 12  AVQRDYIAQPRLCYKTVTGVNGPLVILDDVKFPKFAEIVNLHLADGTERKGQVLEVSGSK 71

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            +V +     G +       F     R   S    GRV N  GKPID   S+   D  ++
Sbjct: 72  AVVQVFEGTSGVDAKYTVCEFTGDILRTPVSEDMLGRVFNGSGKPIDQGPSVLAEDF-LD 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  +     +R   E+  +TGI  ID+   +  GQ+I +F+ +G+  + + +   R    
Sbjct: 131 IQGQPINPWSRTYPEEMIQTGISSIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGL 190

Query: 188 DK---------------VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILR 231
            K               ++ + +G      R F +D+  +   ++V +       P I R
Sbjct: 191 VKLPSKGVHDDHKDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIER 250

Query: 232 KMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
            + P  A+T AEY + + + +VL+IL  ++ +A ++RE++    E+P  RG+P  ++++L
Sbjct: 251 IITPRLALTTAEYLAYQCEKHVLIILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDL 310

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ER G  E  +G+IT +  + +  D+   PI D    I +G I + R L     YPP
Sbjct: 311 ATIYERAGRVEGRQGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVERQLHNRQIYPP 370

Query: 351 VDPLASVSRLADKA 364
           ++ L S+SRL   A
Sbjct: 371 INVLPSLSRLMKSA 384


>gi|78213703|ref|YP_382482.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CC9605]
 gi|124007221|sp|Q3AHK5|ATPA_SYNSC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78198162|gb|ABB35927.1| ATP synthase F1, alpha subunit [Synechococcus sp. CC9605]
          Length = 506

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 20/336 (5%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
           DN+G V+           +G G  I  G  V   G+    P      GRV+N+LG+ IDG
Sbjct: 70  DNVGAVL-----------MGEGYGIQEGSTVKATGKIAAVPVGEAMLGRVVNSLGRAIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +  + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 KGEIATSETRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILR 231
            +   ++  ++D     +   VG++   V   +E  L +   L  +V+V A + E   L+
Sbjct: 178 AIAIDTILNQADQDMICVYVAVGQKAASVANVVE-VLRERGALDYTVIVAANASEPAALQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGATIAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER         KG++TA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A +   KK+  +L   + +F+E
Sbjct: 357 AINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|2116558|dbj|BAA20135.1| F1 ATPase [Pisum sativum]
          Length = 561

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 143/266 (53%), Gaps = 18/266 (6%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+PID    L K +  + I  + P  + +   ++   TGI+V+D+  P   G +IG+F 
Sbjct: 175 IGEPIDEKGEL-KTEHFLPIHREGPSFVEQATEQEILVTGIKVVDLLAPYQRGGKIGLFG 233

Query: 169 GSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKS 217
           G+G+GK+ L+    +  A++     V    VGER RE     RE IE     LGD   +S
Sbjct: 234 GAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVIKLGDKQSES 292

Query: 218 --VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274
              +V    +  P  R    LT +T+AE+F  ++G +VLL +D+I RF  +  E++   G
Sbjct: 293 KCALVYGQMNGPPGARARVGLTGLTVAEHFRDAEGQDVLLFVDNIFRFTQANSEVSRLLG 352

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ ++L  L ERI  +  +KG+IT   ++ V  D+  D    +  + LD 
Sbjct: 353 RIPSAVGYQPTLATDLGGLQERI--TTPKKGSITPGQAIYVPADDLTDLAPATTFAHLDA 410

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRL 360
             VL+R+++E G YP VDPL S SR+
Sbjct: 411 TTVLSRTISELGIYPVVDPLDSTSRM 436


>gi|308274420|emb|CBX31019.1| ATP synthase subunit alpha 2 [uncultured Desulfobacterium sp.]
          Length = 514

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 170/369 (46%), Gaps = 14/369 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G    +  D V +  +   EE+  G      GR    P      GRV++ LG  +DG  
Sbjct: 72  MGIAFNLEPDEVLVVTLCRSEELEAGMEARRTGRVTDVPVGEAMLGRVVDPLGNQLDG-- 129

Query: 118 SLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            + K   +M   I  + P  M+R  V     TGI  ID   P+  GQR  +      GK+
Sbjct: 130 -MEKPVTTMRYTIERESPSIMDRAAVTVPLHTGIVAIDALIPIGRGQRELILGDRQTGKT 188

Query: 176 --TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
             T+ ++  + +     I   +G++   V + + D      ++ + VVVA+SDE P +  
Sbjct: 189 AITIDTIINQKNSGVVCIYCSIGQQTSAVAKVVADLKKYGAMEYTTVVVASSDEPPGINF 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +A +IAEYF  KG +VL++ D ++R A S RE++      P    +P  +F    R
Sbjct: 249 IAPYSATSIAEYFMEKGRDVLIVYDDLSRHARSYRELSLLLRRPPAREAFPGDIFYIHSR 308

Query: 293 LLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +EK  G++TA+     +  N    I  ++ SI DG I L+  L +EG  PP
Sbjct: 309 LLERATHLSEEKGGGSLTALPIAETEAQNIAAYIPTNLVSITDGQIYLSPKLFQEGVLPP 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D   SVSR+         + +   L     +FEE   + +   +   +D    +A+ + 
Sbjct: 369 IDIGKSVSRVGGHTQLPVYRSVAGDLKISYAQFEE---LEVFERFSTRLDEATRRALERG 425

Query: 411 PIIYDFLKQ 419
             I + LKQ
Sbjct: 426 HRIREMLKQ 434


>gi|308183238|ref|YP_003927365.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori PeCan4]
 gi|308065423|gb|ADO07315.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori PeCan4]
          Length = 503

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + RE++      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|307931040|dbj|BAJ21381.1| ATP synthase CF1 beta subunit [Prasinococcus capsulatus]
          Length = 277

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 136/259 (52%), Gaps = 21/259 (8%)

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIED 208
           +D+  P   G +IG+F G+G+GK+ L+     +       +S+   VGER RE  +  ++
Sbjct: 1   VDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYQE 60

Query: 209 Y----------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILD 257
                      LGD+  K  +V    +E P  R    LTA+T+AEYF      +VLL +D
Sbjct: 61  MKESNVINESNLGDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFVD 118

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  
Sbjct: 119 NIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKEGSITSIQAVYVPA 176

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-- 375
           D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +  + W   E    ++  
Sbjct: 177 DDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTML-QPWIVGEGHYATAQG 235

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 236 VKQTLQRYKELQDIIAILG 254


>gi|295098946|emb|CBK88035.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium cylindroides
           T2-87]
          Length = 511

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 158/343 (46%), Gaps = 7/343 (2%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDG 115
           D  G V+ +  + V +  +G   +I  GDLV   G     P      GRV+NALG+PIDG
Sbjct: 58  DVYGMVMNLEDEQVGVVLMGENNDIKEGDLVKRTGHIVEVPVGDAMVGRVVNALGQPIDG 117

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           +  +     +  +    P  M R+ V    +TG+++ID   P+  GQR  +      GK+
Sbjct: 118 NGEIHTTK-TRPVERVAPGVMTRKSVSVPLQTGLKIIDSMIPIGRGQRELIIGDRQTGKT 176

Query: 176 TLLS--MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
            + +  +  +     K I   +G++   V + +E +     ++ + +VV+T+ E   L+ 
Sbjct: 177 AIATDTIINQKGQNVKCIYVAIGQKASTVAQIVEKFKQYGAMEYTTIVVSTASEPAPLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I E +   G++VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 237 LAPYAGCAIGEEWMENGEDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSR 296

Query: 293 LLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     ++ GN  +TA+  +     + +  I  +V SI DG I L   +  EG  P 
Sbjct: 297 LLERAARLNEDYGNGSLTALPIIETQAGDISAYIPTNVISITDGQIFLKTDMFNEGIRPS 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           VD   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 357 VDSGFSVSRVGSAAQIKAMKQVSGSLKLELAQYREMESFAKFG 399


>gi|156844098|ref|XP_001645113.1| hypothetical protein Kpol_538p15 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115770|gb|EDO17255.1| hypothetical protein Kpol_538p15 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 510

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  IV +     G ++    + F     +I  S    GR+ N  G PID   
Sbjct: 65  GQVLEVRGDRAIVQVFEGTSGIDVKKTTVEFTGESLKIPVSEDTLGRIFNGSGNPIDNGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TG+  ID    +  GQ+I +F+ SG+  + +
Sbjct: 125 KVFAEDY-LDINGSAINPFARIYPEEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEI 183

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 184 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 243

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 244 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 303

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 304 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ 363

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 364 LHNKGVYPPINVLPSLSRLMKSA 386


>gi|149384869|gb|ABR25243.1| ATP synthase beta chain [Woodsia obtusa]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLSGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKRDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|296273871|ref|YP_003656502.1| ATP synthase F1 subunit alpha [Arcobacter nitrofigilis DSM 7299]
 gi|296098045|gb|ADG93995.1| ATP synthase F1, alpha subunit [Arcobacter nitrofigilis DSM 7299]
          Length = 505

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 182/390 (46%), Gaps = 33/390 (8%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G G  +  G      G+   +P      GRV+NALG+PIDG  ++   +    +
Sbjct: 73  VGVVVLGSGNGLREGSSCKRVGKLLETPVGEAMVGRVVNALGEPIDGKGTIETSETRF-V 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      +   +
Sbjct: 132 EEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTILNQKGE 191

Query: 189 KVIISLV--GERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
            VI   V  G++   V   +   L D+  ++ ++VV A++ +S  L+ +AP T VTI EY
Sbjct: 192 NVICIYVAIGQKSSSVASVVRT-LEDSGAMEYTIVVNASAADSATLQFLAPYTGVTIGEY 250

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F   G + L++ D +++ A + RE++      P    YP  VF    RLLER      E+
Sbjct: 251 FRDNGKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKMSDER 310

Query: 305 --GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     +    I  +V SI DG I L  +L   G  P ++   SVSR+  
Sbjct: 311 GAGSMTALPIIETQAGDVAAYIPTNVISITDGQIFLETNLFNSGIRPAINVGLSVSRVGG 370

Query: 363 KAWSADEKKLVSSLTHLIHRFEE---------------TRDI----RLIGGYRPGVD--L 401
            A     K++  +L   + ++ E                R++    R++   + GV+  L
Sbjct: 371 AAQIKATKQVAGTLKLSLAQYRELEAFAQFASDLDESTRRELELGQRMVEVLKQGVNKPL 430

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +++K   QV IIY   K   +D++  DV +
Sbjct: 431 VIEK---QVVIIYAGTKGYLNDIAVSDVVR 457


>gi|253574260|ref|ZP_04851602.1| ATP synthase F1, alpha subunit [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846737|gb|EES74743.1| ATP synthase F1, alpha subunit [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 507

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 155/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EI  GD V   G+    P      GRV+N LG+PIDG   +   + 
Sbjct: 73  NVGVVILGPYS---EIREGDQVKRTGQIMQVPVGEALLGRVVNPLGQPIDGKGPIETTEF 129

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
              + +  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++  
Sbjct: 130 R-PVENNAPGVIDRKSVHEPMQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAIAIDTIIN 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           +     K I   +G++   V   +E       L  ++VV A++ E   L  +AP   V +
Sbjct: 189 QKGNGVKCIYVAIGQKQSTVVSVVETLRRHGALDYTIVVSASASEPAPLLYIAPYAGVAM 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 249 AEYFMYKGEHVLIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 308

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SVSR
Sbjct: 309 DELGGGSITALPFIETQASDVSAYIPTNVISITDGQIFLESDLFYSGQRPAVNVGISVSR 368

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   + ++ E +     G
Sbjct: 369 VGGSAQIKAMKKVAGTLRLDLAQYRELQAFSQFG 402


>gi|227503867|ref|ZP_03933916.1| F0F1 ATP synthase subunit alpha [Corynebacterium striatum ATCC
           6940]
 gi|227199490|gb|EEI79538.1| F0F1 ATP synthase subunit alpha [Corynebacterium striatum ATCC
           6940]
          Length = 557

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 179/376 (47%), Gaps = 26/376 (6%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG-K 121
           NLD   I  V +G  E ++ GD V   G    I     + GRVIN LG+PIDG   +  +
Sbjct: 79  NLDTNSIGVVVLGNFESLTEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDGLGPIAAE 138

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----T 176
            D  +E+  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK+     T
Sbjct: 139 EDRVLEL--QAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCIDT 196

Query: 177 LLSMFARSDCFDK-----VIISLVGERGRE---VREFIEDYLGDNLKKSVVVVATSDESP 228
           +L+  A  +  DK      I   +G++G     VR  +E +    L+ + +V A + ++ 
Sbjct: 197 ILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRHTLEQH--GALEYTTIVAAPASDAA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLELAAY---RDLQAFAAFASDLDPASKAQ 431

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   + + LKQ+ S
Sbjct: 432 LERGERLVELLKQAES 447


>gi|78777602|ref|YP_393917.1| F0F1 ATP synthase subunit alpha [Sulfurimonas denitrificans DSM
           1251]
 gi|124007225|sp|Q30QP9|ATPA_SULDN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78498142|gb|ABB44682.1| ATP synthase F1, alpha subunit [Sulfurimonas denitrificans DSM
           1251]
          Length = 505

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 176/377 (46%), Gaps = 15/377 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G V+ +    V +  +G G  +  G  V   GR  R+       GRV+NALG+PIDG   
Sbjct: 63  GLVMNLEESTVGVVILGPGPLLKEGMSVKRLGRLLRVPVGDALLGRVVNALGEPIDGKGP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-- 176
           +   +    +  K P  M R+ V +   TGI+ ID   P+  GQR  +      GK+T  
Sbjct: 123 IETTETRF-VEEKAPGIMARKSVHEPLATGIKAIDALVPIGRGQRELIIGDRQTGKTTVA 181

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
           L ++  +       I   VG++   V + I   ED+    ++ ++VV +T+ E+  L+ +
Sbjct: 182 LDAIINQKGNGVVCIYVAVGQKESTVAQIIRRLEDH--GAMEYTIVVSSTAAEAAALQFL 239

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    RL
Sbjct: 240 APYTGVTMGEYFRDNARHGLIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYIHSRL 299

Query: 294 LERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E+  G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 300 LERAAKVSDERGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNSGVRPAI 359

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  +L   + ++   R+++    +   +D    K + +  
Sbjct: 360 NVGLSVSRVGGAAQIKATKQVAGTLRLDLAQY---RELQAFAQFASDLDETSRKQLERGQ 416

Query: 412 IIYDFLKQSP-SDLSSE 427
            + + LKQ P S LS E
Sbjct: 417 RMVEVLKQPPFSPLSVE 433


>gi|149384565|gb|ABR25105.1| ATP synthase beta chain [Elaphoglossum papillosum]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRIFNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +       
Sbjct: 96  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
             +N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 155 NEENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 214

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDP  S S +  + W   A+       +   + R++
Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPPDSTSTML-QPWIVGAEHYDTAQGVKQTLQRYK 331

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 332 ELQDIIAILG 341


>gi|149384383|gb|ABR25014.1| ATP synthase beta chain [Asplenium affine]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 151/319 (47%), Gaps = 20/319 (6%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           G   +       GR+ N LG+P+D D    +   +  I    P           F+TGI+
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD-DLGPVQSSTTFPIHRPAPAFTQLDTKLSIFETGIK 86

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI 206
           V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +  
Sbjct: 87  VVDLSAPYRRGGKIGLFGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGNDLY 145

Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILD 257
            +     +         K  +V    +E P  R     TA T+AEYF      +VLL +D
Sbjct: 146 MEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFID 205

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I RF  +  E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  
Sbjct: 206 NIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSSQERI--TSTKEGSITSIQAVYVPA 263

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSS 375
           D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       
Sbjct: 264 DDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQG 322

Query: 376 LTHLIHRFEETRDIRLIGG 394
           +   + R++E +DI  I G
Sbjct: 323 VKQTLQRYKELQDIIAILG 341


>gi|149384809|gb|ABR25213.1| ATP synthase beta chain [Thelypteris ovata]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLSFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|310778009|ref|YP_003966342.1| ATP synthase F1 subcomplex alpha subunit [Ilyobacter polytropus DSM
           2926]
 gi|309747332|gb|ADO81994.1| ATP synthase F1 subcomplex alpha subunit [Ilyobacter polytropus DSM
           2926]
          Length = 500

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 154/322 (47%), Gaps = 19/322 (5%)

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIM--- 129
           P G+ E    GD V   G     P+     GRV+NALG+PIDG     KGD+  E M   
Sbjct: 79  PTGVKE----GDEVRATGEVAAVPAGEGLLGRVVNALGEPIDG-----KGDIKTERMMTL 129

Query: 130 -SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--LLSMFARSDC 186
             K    + R+ V +  +TGI+ ID   P+  GQR  +      GK+   L ++  +   
Sbjct: 130 ERKAHGIIARKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAVALDAIINQKGT 189

Query: 187 FDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
             K I   +G+R   V + ++       ++ ++VV AT+ E   L+ MAP   V++ EYF
Sbjct: 190 GVKCIYVAIGQRRSTVAQIVKKLENAGAMEYTIVVAATASEPAPLQYMAPYCGVSMGEYF 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
             KG++VL++ D +++ A + RE++      P    YP  VF    RLLER      +  
Sbjct: 250 MDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHSRLLERAAKLSDDLG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   
Sbjct: 310 AGSITALPIIETQAGDVSAFIPTNVISITDGQIFLDSELFNSGFRPAINAGISVSRVGGS 369

Query: 364 AWSADEKKLVSSLTHLIHRFEE 385
           A     K++ + +   + ++ E
Sbjct: 370 AQIKAMKQVAAKVKLELAQYSE 391


>gi|166836566|gb|ABY90515.1| ATP synthase beta chain [Salvinia cucullata]
          Length = 356

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 141/270 (52%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 97  GNDLYIEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEK 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W    +  
Sbjct: 215 VYVPADDLTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 273

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 274 DTAQGVKETLQRYKELQDIIAI----PGLD 299


>gi|328681685|gb|AEB32915.1| ATP synthase beta subunit [Drucella integristipula]
          Length = 380

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S       P PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 118 VALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            V +R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVSSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|156739738|gb|ABU93522.1| ATP synthase beta subunit [Arachniodes simplicior]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 37  GRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 93

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +  
Sbjct: 94  GGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 152

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 271 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|91780113|ref|YP_555320.1| F0F1 ATP synthase subunit alpha [Burkholderia xenovorans LB400]
 gi|118573470|sp|Q13IW9|ATPA3_BURXL RecName: Full=ATP synthase subunit alpha 3; AltName: Full=ATP
           synthase F1 sector subunit alpha 3; AltName:
           Full=F-ATPase subunit alpha 3
 gi|91692773|gb|ABE35970.1| ATP synthase F1, alpha subunit [Burkholderia xenovorans LB400]
          Length = 530

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 150/316 (47%), Gaps = 7/316 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
             D  G  + ++ D +    +   + I+ G +V   G+    P      GRV++ LG+P+
Sbjct: 61  EGDRFGFALTLDADTIGAVLLDDADAITAGSIVTGTGQVVQVPVGPGLTGRVVDPLGRPL 120

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG  ++   D  M I    P  + R  V +   TGI +ID    +  GQR  +      G
Sbjct: 121 DGRGAV-HADARMPIERPAPSIIERDLVAEPLATGILLIDALFAIGRGQRELIIGDRATG 179

Query: 174 KSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           K+ + +         D + + + +G+R   V   I         ++ V V A+S  S  L
Sbjct: 180 KTAIAIDAIVNQKNSDVICVYVAIGQRASAVERVIAAVREHGAPERCVFVFASSAASAGL 239

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +A+TIAEYF  +G + L+++D +TR A + RE+A  + E P    YP  +F   
Sbjct: 240 QWIAPFSAMTIAEYFRDRGQHALVVIDDLTRHAATHRELALLTREPPGREAYPGDIFYLH 299

Query: 291 PRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E+  G++TA+     D  N +  I  ++ SI DG IVL+  L    + 
Sbjct: 300 ARLLERAAKLSPERGGGSLTALPIAETDAGNLSAYIPTNLISITDGQIVLDTGLFAANQR 359

Query: 349 PPVDPLASVSRLADKA 364
           P +D   SVSR+  KA
Sbjct: 360 PAIDVGLSVSRVGGKA 375


>gi|52788834|gb|AAU87389.1| ATP synthase beta chain [Coniogramme fraxinea]
          Length = 383

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLSGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDVNRQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 300

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 301 LQDIIAILG 309


>gi|298491952|ref|YP_003722129.1| ATP synthase F1 subunit alpha ['Nostoc azollae' 0708]
 gi|298233870|gb|ADI65006.1| ATP synthase F1, alpha subunit ['Nostoc azollae' 0708]
          Length = 506

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 172/388 (44%), Gaps = 29/388 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           G   + Q    DN+G V+           +G G  I  G  V   GR  ++       GR
Sbjct: 60  GTIGIAQNLEEDNVGAVL-----------MGEGRNIQEGSSVTATGRIAQVGVGEVLIGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           V++ALG+ IDG     KGD        I S  P  + R+ V +  +TGI  ID   P+  
Sbjct: 109 VLDALGRAIDG-----KGDPKTTETRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGR 163

Query: 161 GQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKS 217
           GQR  +      GK+ + +         D V + + +G++   V   ++       +  +
Sbjct: 164 GQRELIIGDRQTGKTAIAIDTIINQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYT 223

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           VVV A + +   L+ +AP T  TIAEYF  KG   L+I D +++ A + R+++      P
Sbjct: 224 VVVAANASDPATLQFLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPP 283

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER      E  KG++TA+  +     + +  I  +V SI DG 
Sbjct: 284 GREAYPGDVFYIHSRLLERAAKLSDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQ 343

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P V+P  SVSR+   A +   KK+   +   + +F+   D++    +
Sbjct: 344 IFLSSDLFNSGIRPAVNPGISVSRVGSAAQTKAMKKVAGKIKLELAQFD---DLQAFAQF 400

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              +D      + +   + + LKQ  +D
Sbjct: 401 ASDLDKATQDQLARGVRLRELLKQPQND 428


>gi|149384711|gb|ABR25164.1| ATP synthase beta chain [Niphidium crassifolium]
          Length = 385

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 154/306 (50%), Gaps = 22/306 (7%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P   G 
Sbjct: 1   IFNVLGEPVD---NLGPVRSNATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           N
Sbjct: 58  KIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQN 117

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 177

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 178 ALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSA 235

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +D
Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQD 294

Query: 389 IRLIGG 394
           I  I G
Sbjct: 295 IIAILG 300


>gi|328681597|gb|AEB32871.1| ATP synthase beta subunit [Kurzia trichoclados]
          Length = 324

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G  IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 27  FETGIKVVDLLAPYRRGGXIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 86

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 87  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 146

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 147 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 204

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 205 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 263

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 264 ETAQGVKQTLQRYKELQDIIAILG 287


>gi|167856123|ref|ZP_02478864.1| ATP synthase subunit alpha [Haemophilus parasuis 29755]
 gi|219871747|ref|YP_002476122.1| F0F1 ATP synthase subunit alpha [Haemophilus parasuis SH0165]
 gi|254807699|sp|B8F772|ATPA_HAEPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167852764|gb|EDS24037.1| ATP synthase subunit alpha [Haemophilus parasuis 29755]
 gi|219691951|gb|ACL33174.1| F0F1 ATP synthase subunit alpha/H(+)-transporting two-sector
           ATPase, (F1) alpha subunit [Haemophilus parasuis SH0165]
          Length = 513

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 148/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGEIDNDGFSPIEVIA--PGVIDRQSVDQPVQTGYKAVDSMVPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L+ 
Sbjct: 163 QRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALQN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERAARVNADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  S    G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLETSFFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|159110881|ref|XP_001705680.1| Vacuolar ATP synthase subunit B [Giardia lamblia ATCC 50803]
 gi|157433768|gb|EDO78006.1| Vacuolar ATP synthase subunit B [Giardia lamblia ATCC 50803]
          Length = 497

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 29/297 (9%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGI 149
            ++  S    GR ++  G+ IDG    G   L+ EI      ++N   R+  +   +TGI
Sbjct: 91  MKVGVSRALLGRTLSGSGEIIDG----GAPVLAEEIRDIEGSSLNPVSREYPKNCLETGI 146

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD--CF----------------DKVI 191
             IDI T +C GQ+I + +GSG+  + LL+  AR+   C                 DK +
Sbjct: 147 STIDILTSICQGQKILLLSGSGLPYNPLLAQIARNARVCVSWEKAVTGEEIKTSEDDKFM 206

Query: 192 ISLVG-ERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-S 247
           I   G     E   F +        L +SV+++  + +  + R   P  AVTIAEYF+ +
Sbjct: 207 IVFAGIGLSHEQAMFFKTQFEQTGALNRSVILLNLASDPVVQRISTPRIAVTIAEYFAYT 266

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G +VL++L  I  +A ++R+I++   E+P  +GYP  ++S+L  + ER G     KG+I
Sbjct: 267 LGYHVLVLLSDIFNYADALRQISSARNEVPGRKGYPPYLYSDLSTIYERAGRVHGIKGSI 326

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           T +  + +  D+    IAD    I +G I  +R L  +   P VDPL S+SRL   A
Sbjct: 327 TQIPLITLPNDDITHIIADLSAFITEGQIFQDRKLFNKNIIPAVDPLPSLSRLQKSA 383


>gi|257853474|gb|ACV71739.1| ATP synthase beta subunit [Hensmania turbinata]
          Length = 365

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 23  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 82

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 83  GNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 142

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 143 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 200

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 201 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 260

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 261 TAQRVKQTLQRYKELQDIIAILG 283


>gi|260434493|ref|ZP_05788463.1| ATP synthase F1, alpha subunit [Synechococcus sp. WH 8109]
 gi|260412367|gb|EEX05663.1| ATP synthase F1, alpha subunit [Synechococcus sp. WH 8109]
          Length = 506

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 20/336 (5%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
           DN+G V+           +G G  I  G  V   G+    P      GRV+N+LG+ IDG
Sbjct: 70  DNVGAVL-----------MGEGYGIQEGSTVKATGKIAAVPVGEAMLGRVVNSLGRAIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +  + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 KGEIATSETRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILR 231
            +   ++  ++D     +   VG++   V   +E  L +   L  +V+V A + E   L+
Sbjct: 178 AIAIDTILNQADQDMICVYVAVGQKAASVANVVE-VLRERGALDYTVIVAANASEPAALQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGATIAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER         KG++TA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A +   KK+  +L   + +F+E
Sbjct: 357 AINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|149384521|gb|ABR25083.1| ATP synthase beta chain [Dryopteris squamiseta]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|310947794|gb|ADP50716.1| ATP synthase beta chain [Anogramma leptophylla]
          Length = 370

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 18/300 (6%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +G   ++  I    P           F+TGI+V+D+  P   G +IG+F 
Sbjct: 2   LGEPVDNLGPVGN-SITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFG 60

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV 219
           G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S V
Sbjct: 61  GAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNISESKV 120

Query: 220 --VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
             V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 121 ALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRM 180

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   
Sbjct: 181 PSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATT 238

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I G
Sbjct: 239 VLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 297


>gi|156739816|gb|ABU93561.1| ATP synthase beta subunit [Pteridrys lofouensis]
          Length = 389

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 152/310 (49%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 31  LGRISNVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 87

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     + 
Sbjct: 88  RGGKIGLFGGAGVGKTVPIMESINNIAKAHGGASVSGGVG-ERTREGNDLYMEMKESKVI 146

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 147 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 206

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 207 SEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 264

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  + LD   V +R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 265 TTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 323

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 324 ELQDIIAILG 333


>gi|149384411|gb|ABR25028.1| ATP synthase beta chain [Asplenium platyneuron]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +          NL +S V  V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G +P VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIHPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|311033324|ref|ZP_07711414.1| F0F1 ATP synthase subunit alpha [Bacillus sp. m3-13]
          Length = 503

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 174/391 (44%), Gaps = 34/391 (8%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ IV + P     EI  GD V   GR    P      GRV+NALG+P+DG   LG  + 
Sbjct: 70  NVGIVILGPY---TEIREGDAVRRTGRIMEVPVGEALIGRVVNALGQPVDG---LGPIET 123

Query: 125 SME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
           S    I ++ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++
Sbjct: 124 SKTRPIEAQAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTI 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++   VR  +E       L  ++VV A++     +  +AP T V
Sbjct: 184 LNQKDQDMVCIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASAPAPMLFLAPYTGV 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+ E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER   
Sbjct: 244 TMGEEFMYDGKHVLVIYDDLTKQAAAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
               K  G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SV
Sbjct: 304 LSDAKGAGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE-------------------TRDIRLIGGYRPG 398
           SR+   A     KK+  +L   +  + E                    R  R +   + G
Sbjct: 364 SRVGGSAQIKAMKKVSGTLRLDLASYRELEAFAQFGSDLDKATQAKLNRGARTVEVLKQG 423

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++  L K   QV I+Y   K    D+  +DV
Sbjct: 424 LNKPL-KVEKQVAILYALTKGFIDDVPVQDV 453


>gi|156739760|gb|ABU93533.1| ATP synthase beta subunit [Dryopteris hendersonii]
 gi|156739762|gb|ABU93534.1| ATP synthase beta subunit [Dryopteris shikokiana]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|156739752|gb|ABU93529.1| ATP synthase beta subunit [Dryopteris pacifica]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|149384859|gb|ABR25238.1| ATP synthase beta chain [Diplazium proliferum]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D   P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDPLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD     +R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTAPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|291166001|gb|EFE28048.1| V-type ATP synthase alpha chain 2 (V-type ATPase subunitA 2)
           [Filifactor alocis ATCC 35896]
          Length = 594

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 130/254 (51%), Gaps = 16/254 (6%)

Query: 121 KGDLSMEIMSKVP-----PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           +G+  +++  K P     P   R+ +++   TG RV+DIF P+  G    +  G G GK+
Sbjct: 182 RGEKELKLYQKWPVRTPRPVRERRPIQELLITGQRVLDIFFPIAKGGTAALPGGFGTGKT 241

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESP 228
                 A+    D ++    GERG E+ E +ED+        G  L    +++A +   P
Sbjct: 242 MTQHQLAKWSDADIIVYIGCGERGNEMTEVLEDFPKLIDPKSGKPLMDRTILIANTSNMP 301

Query: 229 ILRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           +  + A + T +T+AEY+   G +V ++ DS +R+A ++REI+    E+P   GYP  + 
Sbjct: 302 VAAREASIYTGITMAEYYRDMGYHVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLP 361

Query: 288 SELPRLLERIG---PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           S L +  ER G     + E+G++T + +V   G + ++P+ ++ +  ++  + L+R LA 
Sbjct: 362 SRLAQFYERAGYVTTLDGEEGSVTIIGAVSPPGGDFSEPVTENTKRFVNAFLALDRKLAY 421

Query: 345 EGRYPPVDPLASVS 358
              YP +  L S S
Sbjct: 422 ARHYPAIGYLTSYS 435


>gi|323342166|ref|ZP_08082399.1| V-type ATP synthase, subunit B [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322464591|gb|EFY09784.1| V-type ATP synthase, subunit B [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 481

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 139/267 (52%), Gaps = 10/267 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR  +  G PIDG  ++     S +I  +V   ++R        TG+  ID    L  GQ
Sbjct: 87  GRSFSGSGVPIDGLGAVFTEKFS-DINGRVINPVSRIYPRNYINTGVSAIDGLNTLIRGQ 145

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCF--DK-----VIISLVGERGREVREFIEDYLGDNLK 215
           ++ +F+GSG+  + L +   R      DK     ++ + +G +      F + ++   + 
Sbjct: 146 KLPIFSGSGLSHNELAAQIVRQAKLHGDKNEDFAIVFAAMGVKHDVAAFFKQTFMEHGVM 205

Query: 216 KSVVVVATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273
             V +       PI+ R + P  A+T AEY +  K  ++L+++  IT +  ++RE +++ 
Sbjct: 206 DHVTMFLNLANDPIIERILTPRFALTAAEYLAFEKNMHILVVMTDITSYCEALREYSSSK 265

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            E+P  +GYP  ++S+L  + ER G  E   G++T +  + +  D+ + PIAD    I +
Sbjct: 266 EEVPGRKGYPGYLYSDLASMYERAGCVEGSTGSLTQIPILTMPNDDISHPIADCTGYITE 325

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRL 360
           G IVL+RS+ ++G YPP++ L S+SRL
Sbjct: 326 GQIVLDRSMTQKGIYPPINVLPSLSRL 352


>gi|156739768|gb|ABU93537.1| ATP synthase beta subunit [Phanerophlebiopsis duplicatoserrata]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 151/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S  G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSASGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|156739730|gb|ABU93518.1| ATP synthase beta subunit [Arachniodes centrochinensis]
 gi|156739736|gb|ABU93521.1| ATP synthase beta subunit [Arachniodes rhomboidea]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|167042304|gb|ABZ07033.1| putative ATP synthase alpha/beta family, nucleotide-binding domain
           protein [uncultured marine crenarchaeote
           HF4000_ANIW97J3]
          Length = 467

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 32/344 (9%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRV 151
           +S S    GRV + LG P D     G   +S E    V  ++N   R+   +  +TG+  
Sbjct: 80  LSVSDEMLGRVFDGLGNPKDN----GPKIVSKEKFDLVGSSINPYSREEPSEFIQTGMSN 135

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVRE 204
           ID    L  GQ++ +F+ SG+  + L S  AR        + F  V+ + +G    E   
Sbjct: 136 IDGMNTLVRGQKLPIFSASGLPHNQLASQIARQAQVLGTEENFS-VVFAAIGITSEEANF 194

Query: 205 FIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRF 262
           FI+ +    +L+++ + +  S +  + R + P  A+T AE+ +  +  +VL+IL  +T +
Sbjct: 195 FIKQFEESGSLERTALFLNLSSDPSMERILTPRLALTTAEFLAYEREQHVLVILTDMTNY 254

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             ++REI+    E+P  RGYP  ++++L  + ER G  +  KG++T +  + +  D+   
Sbjct: 255 CEALREISAAREEVPGRRGYPGYLYTDLASIYERAGKIKGRKGSVTQLPILTMPADDITH 314

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLT 377
           PI D    I +G IV+NR L      PPVD L S+SRL ++         D ++L   L 
Sbjct: 315 PIPDLTGYITEGQIVMNRELHRANIQPPVDVLTSLSRLMNQGIGEGRTREDHRQLADQLY 374

Query: 378 HLIHRFEETRDIRLIGGYRPGVDL----------ILDKAVHQVP 411
               + ++ R +  I G     DL             K VHQ P
Sbjct: 375 AAYAQGKDARALAAIVGEGALSDLDRKFLIVANDFEKKFVHQGP 418


>gi|310947780|gb|ADP50709.1| ATP synthase beta chain [Adiantum cunninghamii]
 gi|310947786|gb|ADP50712.1| ATP synthase beta chain [Adiantum fulvum]
 gi|310947792|gb|ADP50715.1| ATP synthase beta chain [Adiantum viridescens]
          Length = 370

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 153/309 (49%), Gaps = 28/309 (9%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+     L++  A++     V   +  ER RE  +   +     +        
Sbjct: 59  FGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVINEQNIAE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIA 294

Query: 392 IGGYRPGVD 400
           I    PG+D
Sbjct: 295 I----PGLD 299


>gi|156739774|gb|ABU93540.1| ATP synthase beta subunit [Leptorumohra miqueliana]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P +         F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPASTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 210 AGSEVSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E       +   + R+
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|5031145|gb|AAD38083.1|AF093422_1 ATP synthase beta subunit [Tetracentron sinense]
          Length = 498

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG         I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVXXXXXXXIHRSAPAFIQLDTKLSIFETGIKVVDLXA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G + G+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 161 PYRRGGKXGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 281 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 399 KELQDIIAILG 409


>gi|25808411|gb|AAN74332.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF   G + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHGRHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|149384505|gb|ABR25075.1| ATP synthase beta chain [Cyclodium trianae]
 gi|149384595|gb|ABR25120.1| ATP synthase beta chain [Olfersia cervina]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P            +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|116490721|ref|YP_810265.1| F0F1 ATP synthase subunit alpha [Oenococcus oeni PSU-1]
 gi|290890140|ref|ZP_06553222.1| hypothetical protein AWRIB429_0612 [Oenococcus oeni AWRIB429]
 gi|122277095|sp|Q04G22|ATPA_OENOB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116091446|gb|ABJ56600.1| ATP synthase F1 subcomplex alpha subunit [Oenococcus oeni PSU-1]
 gi|290480184|gb|EFD88826.1| hypothetical protein AWRIB429_0612 [Oenococcus oeni AWRIB429]
          Length = 520

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 9/323 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + IS GD V   G+    P      GRV+NALG+PIDG+ ++ K   +  +
Sbjct: 71  VGIIVLGDFDGISQGDTVKRTGKVMEVPVGDEMIGRVVNALGQPIDGNGAI-KTKHTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDC 186
             K P  M R+ V +  +TGI+VID   P+  GQR  +      GK++L   ++  + D 
Sbjct: 130 EFKAPGVMQRKSVFEPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKDQ 189

Query: 187 FDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              V+   +G++   VR  +E    +G  L  ++VV A   E   +  +AP     + EY
Sbjct: 190 DMIVVYVAIGQKDSTVRTQVETLREMG-ALDYTIVVSAAPSEPAPMLYLAPYVGAALGEY 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 249 FMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDEL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+  
Sbjct: 309 GGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLDADQFYSGNRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEE 385
            A     KK+  +L   +  + E
Sbjct: 369 DAQIKAMKKVSGTLRLDLASYHE 391


>gi|308160459|gb|EFO62949.1| Vacuolar ATP synthase subunit B [Giardia lamblia P15]
          Length = 497

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 146/297 (49%), Gaps = 29/297 (9%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGI 149
            ++  S    GR ++  G+ IDG    G   L+ EI      ++N   R+  +   +TGI
Sbjct: 91  MKVGVSRALLGRTLSGSGEIIDG----GAPVLAEEIRDIEGSSLNPVSREYPKNCLETGI 146

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD--CF----------------DKVI 191
             IDI T +C GQ+I + +GSG+  + LL+  AR+   C                 DK +
Sbjct: 147 STIDILTSICQGQKILLLSGSGLPYNPLLAQIARNARVCVPWEKVATGEEVKTSEDDKFM 206

Query: 192 ISLVG-ERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-S 247
           I   G     E   F +        L +SV+++  + +  + R   P  AVTIAEYF+ +
Sbjct: 207 IVFAGIGLSHEQAMFFKTQFEQTGALNRSVILLNLASDPVVQRISTPRIAVTIAEYFAYT 266

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G +VL++L  I  +A ++R+I++   E+P  +GYP  ++S+L  + ER G     KG+I
Sbjct: 267 LGYHVLVLLSDIFNYADALRQISSARNEVPGRKGYPPYLYSDLSTIYERAGRVHGIKGSI 326

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           T +  + +  D+    IAD    I +G I  +R L  +   P VDPL S+SRL   A
Sbjct: 327 TQIPLITLPNDDITHIIADLSAFITEGQIFQDRKLFNKNIIPAVDPLPSLSRLQKSA 383


>gi|156739770|gb|ABU93538.1| ATP synthase beta subunit [Acrorumohra diffracta]
          Length = 394

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|149384435|gb|ABR25040.1| ATP synthase beta chain [Blechnum gracile]
          Length = 385

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 26/312 (8%)

Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 1   ISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYRRGG 57

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           N
Sbjct: 58  KIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQN 117

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  E++
Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVS 177

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 178 ALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSA 235

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRD 388
            LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R++E +D
Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRYKELQD 294

Query: 389 IRLIGGYRPGVD 400
           I  I    PG+D
Sbjct: 295 IIAI----PGLD 302


>gi|6706182|emb|CAB65961.1| ATP synthase beta subunit [Galax urceolata]
          Length = 272

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 16/229 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 87

Query: 201 EVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-N 251
           E  +  ++     +         K  +V    +E P  R    LTA+T+AEYF    + N
Sbjct: 88  EGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQN 147

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ 
Sbjct: 148 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQ 205

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 206 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 254


>gi|149384477|gb|ABR25061.1| ATP synthase beta chain [Blotiella pubescens]
          Length = 426

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  L+  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSLTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKV 153

Query: 212 ---DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V +     +E P  R     TA T+AEYF      +VL  +D+I RF  +
Sbjct: 154 INEQNISESKVALVHGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNILRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|7708688|emb|CAB90020.1| ATP synthase beta subunit [Tulipa kolpakowskiana]
          Length = 436

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+ G  V+D+  
Sbjct: 57  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIXXDTXLSIFEXGXXVVDLLA 113

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 174 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ER   +  ++G+IT++ +V V  D+  DP 
Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERX--TSTKEGSITSIQAVYVPADDLTDPA 291

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +     R+
Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSXRY 351

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 352 KELQDIIAILG 362


>gi|7708487|emb|CAB89931.1| ATP synthase beta subunit [Malpighia coccigera]
          Length = 470

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 35  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 95  IFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 151

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 211

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V     E P  R     TA+ +AEY    K  +VLL + +I RF  +  E++
Sbjct: 212 IAESKVAXVYGQMXEPPGARXRVGXTALXMAEYXRDVKEQDVLLFIXNIFRFVQAGSEVS 271

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 272 ALLGRMPSAVGYQPTLSTEMXSLQERI--TXTKEGSITSIQAVYVPADDLTDPAPATTFA 329

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
            LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 330 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 389

Query: 390 RLIGG 394
             I G
Sbjct: 390 IAILG 394


>gi|167045266|gb|ABZ09925.1| putative ATP synthase alpha/beta family, nucleotide-binding domain
           protein [uncultured marine crenarchaeote
           HF4000_APKG9M20]
 gi|167045353|gb|ABZ10010.1| putative ATP synthase alpha/beta family, nucleotide-binding domain
           protein [uncultured marine crenarchaeote
           HF4000_APKG10D8]
          Length = 467

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 32/344 (9%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRV 151
           +S S    GRV + LG P D     G   +S E    V  ++N   R+   +  +TG+  
Sbjct: 80  LSVSDEMLGRVFDGLGNPKDN----GPKIVSKEKFDLVGSSINPYSREEPSEFIQTGMSN 135

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVRE 204
           ID    L  GQ++ +F+ SG+  + L S  AR        + F  V+ + +G    E   
Sbjct: 136 IDGMNTLVRGQKLPIFSASGLPHNQLASQIARQAQVVGTEENFS-VVFAAIGITSEEANF 194

Query: 205 FIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRF 262
           FI+ +    +L+++ + +  S +  + R + P  A+T AE+ +  +  +VL+IL  +T +
Sbjct: 195 FIKQFEESGSLERTALFLNLSSDPSMERILTPRLALTTAEFLAYEREQHVLVILTDMTNY 254

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             ++REI+    E+P  RGYP  ++++L  + ER G  +  KG++T +  + +  D+   
Sbjct: 255 CEALREISAAREEVPGRRGYPGYLYTDLASIYERAGKIKGRKGSVTQLPILTMPADDITH 314

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLT 377
           PI D    I +G IV+NR L      PPVD L S+SRL ++         D ++L   L 
Sbjct: 315 PIPDLTGYITEGQIVMNRELHRANIQPPVDVLTSLSRLMNQGIGEGRTREDHRQLADQLY 374

Query: 378 HLIHRFEETRDIRLIGGYRPGVDL----------ILDKAVHQVP 411
               + ++ R +  I G     DL             K VHQ P
Sbjct: 375 AAYAQGKDARALAAIVGEGALSDLDRKFLIVANDFEKKFVHQGP 418


>gi|170290914|ref|YP_001737730.1| V-type ATP synthase subunit B [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174994|gb|ACB08047.1| H+-ATPase subunit B [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 465

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 157/313 (50%), Gaps = 14/313 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           LGQV+    D V I  +G  E +    +V F     +++ S    GRV N  G+PIDG  
Sbjct: 44  LGQVLEAGRDKVVIQILGDTEGLDANAIVKFTGSTLKVAVSDEVLGRVFNGAGEPIDGGP 103

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D      + + P + R   ++  +TGI  ID    L  GQ++ +F+ SG+  + +
Sbjct: 104 KIRAEDFRDINGAPINP-VKRDYPDEFIETGISAIDGMLSLIRGQKLPIFSESGLPHNEV 162

Query: 178 LSMFARSDCF------DKVIISLVGERGREV---REFIEDYLGDNLKKSVVVVATSDESP 228
            +  AR            ++ + VG +  +V   R   E++    L +SV+ +  +++  
Sbjct: 163 AAQIARQAVVLGREEKFSIVFAAVGLKYDDVLFFRRQFEEF--GALSRSVLFLNLANDPV 220

Query: 229 ILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           I R   P  A+T+AEY +   G +VL+I+D +T +  ++RE+++   E+P  +GYP  ++
Sbjct: 221 IERITTPRVALTVAEYLAFDLGMDVLVIIDDMTNYCEALRELSSAREEVPSRKGYPGYMY 280

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           S+L  + ER G      G+IT +  + + G +   PI D    I +G I L+  L   G 
Sbjct: 281 SDLASIYERAGRIIGRPGSITFMPILTMPGGDLTHPIPDLTGYITEGQIFLDLDLHNRGI 340

Query: 348 YPPVDPLASVSRL 360
           YPP++ L S+SRL
Sbjct: 341 YPPINVLPSLSRL 353


>gi|310947798|gb|ADP50718.1| ATP synthase beta chain [Cheilanthes sieberi]
          Length = 370

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 152/309 (49%), Gaps = 28/309 (9%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +        
Sbjct: 59  FGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNISE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  S+ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPFAVGYQPSLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIA 294

Query: 392 IGGYRPGVD 400
           I    PG+D
Sbjct: 295 I----PGLD 299


>gi|167042909|gb|ABZ07624.1| putative ATP synthase alpha/beta family, nucleotide-binding domain
           protein [uncultured marine crenarchaeote
           HF4000_ANIW137N13]
          Length = 467

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 32/344 (9%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRV 151
           +S S    GRV + LG P D     G   +S E    V  ++N   R+   +  +TG+  
Sbjct: 80  LSVSDEMLGRVFDGLGNPKDN----GPKIVSKEKFDLVGSSINPYSREEPSEFIQTGMSN 135

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVRE 204
           ID    L  GQ++ +F+ SG+  + L S  AR        + F  V+ + +G    E   
Sbjct: 136 IDGMNTLVRGQKLPIFSASGLPHNQLASQIARQAQVLGTEENFS-VVFAAIGITSEEANF 194

Query: 205 FIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRF 262
           FI+ +    +L+++ + +  S +  + R + P  A+T AE+ +  +  +VL+IL  +T +
Sbjct: 195 FIKQFEESGSLERTALFLNLSSDPSMERILTPRLALTTAEFLAYEREQHVLVILTDMTNY 254

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             ++REI+    E+P  RGYP  ++++L  + ER G  +  KG++T +  + +  D+   
Sbjct: 255 CEALREISAAREEVPGRRGYPGYLYTDLASIYERAGKIKGRKGSVTQLPILTMPADDITH 314

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLT 377
           PI D    I +G IV+NR L      PPVD L S+SRL ++         D ++L   L 
Sbjct: 315 PIPDLTGYITEGQIVMNRELHRANIQPPVDVLTSLSRLMNQGIGEGRTREDHRQLADQLY 374

Query: 378 HLIHRFEETRDIRLIGGYRPGVDL----------ILDKAVHQVP 411
               + ++ R +  I G     DL             K VHQ P
Sbjct: 375 AAYAQGKDARALAAIVGEGALSDLDRKFLIVANDFEKKFVHQGP 418


>gi|239828587|ref|YP_002951211.1| F0F1 ATP synthase subunit alpha [Geobacillus sp. WCH70]
 gi|259585430|sp|C5D992|ATPA_GEOSW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|239808880|gb|ACS25945.1| ATP synthase F1, alpha subunit [Geobacillus sp. WCH70]
          Length = 502

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 151/318 (47%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ IV + P  GI E    GD V   GR    P      GRV+N LG+P+DG   +   +
Sbjct: 70  NVGIVILGPYTGIKE----GDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPIETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGAAQIKAMKKVSGTL 382


>gi|42558380|gb|AAS19899.1| ATP synthase beta chain [Micropolypodium hyalinum]
          Length = 422

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 155/312 (49%), Gaps = 28/312 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+ N LG+P+        G +   ++S +    PA  +   +   F+TGI+V+D+  P
Sbjct: 74  LGRISNVLGEPV-----YNLGPVRTSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 128

Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     
Sbjct: 129 YRRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 187

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 188 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 247

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 248 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 305

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R
Sbjct: 306 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 364

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 365 YKELQDIIAILG 376


>gi|904134|gb|AAA70379.1| adenosine triphosphatase [Nandina domestica]
          Length = 498

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 149 FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 208

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 209 GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 268

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G  P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 269 LLFIDNIFRFVQAGSEVSALLGRXPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 326

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 327 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 386

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 387 TAQRVKQTLQRYKELQDIIAILG 409


>gi|156739748|gb|ABU93527.1| ATP synthase beta subunit [Dryopteris labordei]
          Length = 394

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSNATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|224543578|ref|ZP_03684117.1| hypothetical protein CATMIT_02787 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523505|gb|EEF92610.1| hypothetical protein CATMIT_02787 [Catenibacterium mitsuokai DSM
           15897]
          Length = 511

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 182/400 (45%), Gaps = 25/400 (6%)

Query: 45  LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCG 103
           LG+ ++  G   D  G V+ ++ D V +  +G  +EI  GD V   G+    P      G
Sbjct: 52  LGELILFPG---DVYGMVMNLDEDSVGVTLLGNADEIKEGDEVRRTGKIIEVPVGDAMLG 108

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV+N LG+PIDG   +     +  I    P  M R+ V++  +TGI  ID   P+  GQR
Sbjct: 109 RVVNPLGQPIDGQGEIITTK-TRPIERVAPGVMTRKSVDQPVQTGITTIDAIIPVGRGQR 167

Query: 164 IGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK----- 216
             +      GK+ +   ++  +       I   +G++   V + +E      LKK     
Sbjct: 168 ELIIGDRQTGKTAIAVDTIINQKGQNMYCIYVAIGQKNSTVAQVVE-----KLKKAGAMD 222

Query: 217 -SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            +VVV A++ E   ++ +AP     IAE +  +G +VL++ D +++ A + R ++     
Sbjct: 223 YTVVVSASASELAPVQYIAPYAGCAIAEEWLDQGKDVLIVYDDLSKHAVAYRTVSLLLKR 282

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILD 333
            P    YP  VF    RLLER     +E   G+ITA+  +     + +  I  +V SI D
Sbjct: 283 PPGREAYPGDVFYLHSRLLERSCRLNEENGGGSITALPIIETQAGDISAYIPTNVISITD 342

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G I L + L   G  P +D   SVSR+   A     K++  +L + + ++EE +     G
Sbjct: 343 GQIFLQQELFNAGFRPAIDTGLSVSRVGSTAQIKAMKQVSRNLKYELAQYEEMQSFAQFG 402

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                +D     A+     + + LKQ  +  +  DV  +I
Sbjct: 403 S---DLDAATKNAIEHGERVREVLKQ--AQYAPRDVIDQI 437


>gi|325973356|ref|YP_004250420.1| ATP synthase F1 subunit beta [Mycoplasma suis str. Illinois]
 gi|323651958|gb|ADX98040.1| ATP synthase F1, beta subunit [Mycoplasma suis str. Illinois]
          Length = 476

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 169/329 (51%), Gaps = 20/329 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID    L   +L   I ++ P   ++    +  +TGI+VID+  P   G
Sbjct: 90  LGRMFNVVGDTIDKLPKLENVELR-SIHAEPPKFSDQTDSIELLETGIKVIDLLIPFAKG 148

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN---LK 215
            +IG+F G+G+GK+ ++     +       +S+   VGER RE  +    Y  +N   LK
Sbjct: 149 GKIGLFGGAGVGKTVVVQELIHNVAKRHSGLSIFVGVGERSREGNDLY--YEMENSGVLK 206

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
            +V++    +E P  R     + + +AEYF  +   +VLL +D+I RF+ +  E++   G
Sbjct: 207 NTVLLFGQMNEVPGARLRVAFSGLAVAEYFRDELSKDVLLFIDNIFRFSQAGSEVSALLG 266

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
             P A GY  ++  E+ RL ERI  +  + G+IT+V +V V  D+  DP   ++ + LD 
Sbjct: 267 RTPSAVGYQPTLGYEMGRLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATIFTHLDA 324

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP + PL S S L  +    +E   V++ +  ++ ++EE +DI  I 
Sbjct: 325 KVVLDRKIAALGIYPAISPLLSSSNLLTERVVGEEHYHVANEVVRVLQKYEELQDIISI- 383

Query: 394 GYRPGVDLILD---KAVHQVPIIYDFLKQ 419
               G+D + D   K V +   I +F  Q
Sbjct: 384 ---LGIDELTDEDKKLVFRARKIRNFFSQ 409


>gi|295101396|emb|CBK98941.1| ATP synthase F1 subcomplex alpha subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 506

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 150/325 (46%), Gaps = 11/325 (3%)

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           VGI E    G  V   G+    P      GRV+NALG+PIDG   +   +    I +  P
Sbjct: 80  VGIKE----GSTVKRTGKVVSVPVGEALIGRVVNALGQPIDGAGPIETTEFR-PIETSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFARSDCFDKVII 192
             + RQ V++  +TGI+ ID   P+  GQR  +      GK+T+ S         D + I
Sbjct: 135 GIIERQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIASDTIINQKGKDVICI 194

Query: 193 SL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G++   V   ++       +  ++VV AT+ E   L+ +AP +   + EYF  KG 
Sbjct: 195 YVAIGQKRSTVANLVQSLTEAGAMSYTIVVSATASELSPLQYIAPYSGCAMGEYFMHKGK 254

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           +VL+I D +++ A + R ++      P    YP  VF    RLLER      E   G++T
Sbjct: 255 HVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLT 314

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P V+P  SVSR+   A    
Sbjct: 315 ALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMPAVNPGISVSRVGGNAQIKA 374

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIG 393
            KK+  +L  +  ++ E +     G
Sbjct: 375 MKKVAGTLKLIYSQYRELQSFAQFG 399


>gi|225630274|ref|YP_002727065.1| ATP synthase F1, alpha subunit [Wolbachia sp. wRi]
 gi|254808124|sp|C0R2Y2|ATPA_WOLWR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|225592255|gb|ACN95274.1| ATP synthase F1, alpha subunit [Wolbachia sp. wRi]
          Length = 513

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 175/369 (47%), Gaps = 16/369 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G V+ ++ D   I  +G   ++  GD+V   G     P      GRV+NALG P+D D  
Sbjct: 63  GIVLDLDHDTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGHPMD-DGG 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +    M+I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+ 
Sbjct: 122 EIRAKNRMDIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIA 181

Query: 179 --SMFARSDCFDKV--------IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             ++  +    D+V        +   +G++   V + +        L+ + VVVA++ + 
Sbjct: 182 LDTIINQKKINDEVNENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDC 241

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +AP    TI E+F   G + L+I D +++ A + R+++      P    YP  +F
Sbjct: 242 APMQFLAPYAGCTIGEFFRDNGMHCLIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIF 301

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +K +G++TA+  V     + +  +  +V SI DG I L   L  +
Sbjct: 302 YVHSRLLERAAKMSDKKGQGSLTALPIVETQAGDVSAYVPTNVISITDGQIFLESELFYK 361

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-YRPGVDLILD 404
           G  P V+   SVSR+   A     KK+  S+   + ++ E  D    G      V L L+
Sbjct: 362 GFRPAVNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFAKFGSDLDASVQLSLN 421

Query: 405 KAVHQVPII 413
           K  + V ++
Sbjct: 422 KGKYLVELL 430


>gi|29726142|gb|AAD00597.2| ATP synthase beta subunit [Macleaya cordata]
          Length = 488

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 151/310 (48%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG         I    P  +        F+TGI+V+D+  P
Sbjct: 95  ATLGRIFNVLGEPVD---NLGPXXXXXXXPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 151

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 152 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 211

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 212 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 271

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 272 GSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 330 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYK 389

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 390 ELQDIIAILG 399


>gi|300781410|ref|ZP_07091264.1| ATP synthase F1 sector alpha subunit [Corynebacterium genitalium
           ATCC 33030]
 gi|300533117|gb|EFK54178.1| ATP synthase F1 sector alpha subunit [Corynebacterium genitalium
           ATCC 33030]
          Length = 548

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 177/379 (46%), Gaps = 26/379 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    ++ D V +  +G  E I  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 63  IGVAQNLDTDTVGVVVLGDFETIYEGDKVSRTGEVLSIPVGEAFLGRVINPLGQPIDG-- 120

Query: 118 SLGKGDLSMEIMSKVPPA--MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            LG  +   E + ++  A  ++RQ VE+  +TGI+ ID  TP+  GQR  +      GK+
Sbjct: 121 -LGPIEADEERVLELQAAGVLDRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKT 179

Query: 176 -----TLLSMFARSDCFDKV-----IISLVGERGRE---VREFIEDYLGDNLKKSVVVVA 222
                T+L+  A  +  DK      I   +G++G     VR  +E++    L+ + +V A
Sbjct: 180 AVCIDTILNQKAYWESGDKTKQVRCIYVAIGQKGSTIAGVRRTLEEH--GALEYTTIVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + +S   + +AP     + +++  +G++VL++ D +T+ A + R I+      P    Y
Sbjct: 238 PASDSAGFKWLAPFAGAALGQHWMYQGNHVLVVYDDLTKQAEAYRAISLLLRRPPGREAY 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E   G++TA+  +    ++    I  +V SI DG   L  
Sbjct: 298 PGDVFYLHSRLLERAAKLNDELGAGSLTALPIIETKANDVGAFIPTNVISITDGQCFLQS 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P +D   SVSR+   A +   KK+  +L   +  +   RD+     +   +D
Sbjct: 358 DLFNQGVRPAIDVGISVSRVGGAAQTKGMKKVAGNLRLDLAAY---RDLESFAAFASDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQ 419
               + + +   + + LKQ
Sbjct: 415 DASKRQLERGQRLVELLKQ 433


>gi|157377618|ref|YP_001476218.1| F0F1 ATP synthase subunit alpha [Shewanella sediminis HAW-EB3]
 gi|189081319|sp|A8G1W7|ATPA_SHESH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157319992|gb|ABV39090.1| H(+)-transporting two-sector ATPase [Shewanella sediminis HAW-EB3]
          Length = 513

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 164/344 (47%), Gaps = 24/344 (6%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   SL  GD V   GR    P      GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAVVMGPYASLAEGDKVKTTGRILEVPVGNGLLGRVVNTLGEPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + R+ V++  +TG + +D   P+  GQR  +     IGK+ L 
Sbjct: 122 EHDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKMA 234
             ++  + D   K +   VG++   +   +   D  G  L  ++VVVAT+ E+  L+ +A
Sbjct: 180 IDAIINQKDSGIKCVYVAVGQKASTIANVVRKLDEHG-ALANTIVVVATASEAAALQYLA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 239 PYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER              G  +   G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 299 ERASRVNAEYVEKFTKGEVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 359 LFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|37720985|gb|AAN32495.1| ATP synthase beta subunit [Coelogyne cristata]
          Length = 499

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P 
Sbjct: 106 GATLGRIFNVLGEPVDNLGPVNTRTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 164

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S 
Sbjct: 165 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESG 222

Query: 219 VV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
           V+    +A S         +E P  R    LTA+T+AEYF    + +VLL +D+I  F  
Sbjct: 223 VINEKDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFXFVQ 282

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++     +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 283 AGSEVSALLXRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 340

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 341 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 400

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 401 KELQDIIAILG 411


>gi|14718064|gb|AAK72773.1| ATP synthase beta subunit [Gomortega keule]
          Length = 384

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 23/278 (8%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 95  GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+
Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 209

Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           S V+    +A S         +E P  R    LTA+T+AEYF    + +VLL + +I RF
Sbjct: 210 SGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIGNIFRF 269

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  D
Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 327

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           P   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365


>gi|325846623|ref|ZP_08169538.1| ATP synthase ab C terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481381|gb|EGC84422.1| ATP synthase ab C terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 583

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 11/241 (4%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P    +++ +   TG RV+DIF P+  G  + +  G G GK+ L    A+    D +I  
Sbjct: 195 PIKRSKQLSELLLTGQRVLDIFFPIAKGGTVAIPGGFGTGKTMLQHQLAQYSNADIIIYI 254

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ + +ED+        G  L +  +++A +   P+  + A + T +T+AEYF
Sbjct: 255 GCGERGNEMTQVLEDFPDLIDPNTGRGLMERTILIANTSNMPVAAREASIYTGITMAEYF 314

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302
              G +V L+ DS +R+A ++REI+    E+P   GYP  + S L +  ER G  +    
Sbjct: 315 RDMGYDVALMADSTSRWAEALREISARLEEIPAEEGYPAYLGSRLSQFYERAGDFDNLNG 374

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++T + +V   G + ++P+ ++ R  ++  + L+++LA    YP ++ L S S   +
Sbjct: 375 SHGSVTLIGAVSPTGGDFSEPVTENTRRSVNVFLGLDKNLAYSRHYPAINWLTSYSNYLN 434

Query: 363 K 363
           +
Sbjct: 435 Q 435


>gi|307133305|ref|YP_003885321.1| F1 sector of membrane-bound ATP synthase, subunit alpha [Dickeya
           dadantii 3937]
 gi|306530834|gb|ADN00765.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Dickeya
           dadantii 3937]
          Length = 513

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG PIDG     KG L  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGAPIDG-----KGPLEHDGFSPVEAIAPGVIDRQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LSNTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    YP  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|6687711|emb|CAB65054.1| ATP synthase beta subunit [Hydrostachys imbricata]
          Length = 377

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 28  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 87

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 88  GNDLYMEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 147

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 148 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 205

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 206 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 265

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 266 TAQRVKETLQRYKELQDIIAILG 288


>gi|109898986|ref|YP_662241.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas atlantica T6c]
 gi|123360629|sp|Q15SF1|ATPA1_PSEA6 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|109701267|gb|ABG41187.1| ATP synthase F1, alpha subunit [Pseudoalteromonas atlantica T6c]
          Length = 528

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 183/396 (46%), Gaps = 22/396 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLG--DFVVHQGKNSDNL 59
           Q   E L Q  +    NLV+Q   I S+ SV   +  +      G  + +   G   D  
Sbjct: 14  QYLFEHLEQSRQRAQPNLVLQ--EIGSVKSVSAGIAIVHGLPSAGFEELLRFPG---DIY 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G    I+   + +  +G   +++ GD V   GR    P  A   GRVI+ LG+ +DG   
Sbjct: 69  GIAFNIDEHDIGVIMLGDYSQLNAGDEVKRTGRVVDIPVGADLIGRVIDPLGRTLDG--- 125

Query: 119 LGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KG+L+    M I    P  M R  V +  +TG++V+D   P+  GQR  +      GK
Sbjct: 126 --KGNLTSTQRMAIERPAPEIMTRSPVTEPLQTGLKVLDALIPIGKGQRELIMGDRQTGK 183

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
           +++   ++  + D     +   +G++   V + +      N  + +VV+V   ++ P L 
Sbjct: 184 TSIAIDAILNQKDKNVLCVYCAIGQKSASVAKILATLKHHNAFEYTVVMVTEGNDPPGLD 243

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A +I EYF  +G +VL++ D +T+ A S RE++      P    +P  +F    
Sbjct: 244 YIAPYAATSIGEYFMEQGRDVLIVYDDLTQHARSYRELSLLLRRPPGREAFPGDIFYLHS 303

Query: 292 RLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +    G++TA+  +  +  N +  I  ++ SI DG I L+  L   G  P
Sbjct: 304 RLLERSTHLNEAHGGGSMTALPIIETEEQNMSAYIPTNLISITDGQIYLSPDLFSLGILP 363

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            VD   SVSR+  KA  +  +K+  +L     +FEE
Sbjct: 364 AVDVGKSVSRVGGKAQRSAFRKVSGALKLAYAQFEE 399


>gi|325989791|ref|YP_004249490.1| puative ATP synthase subunit beta [Mycoplasma suis KI3806]
 gi|323574876|emb|CBZ40536.1| puative ATP synthase subunit beta [Mycoplasma suis]
          Length = 489

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 169/329 (51%), Gaps = 20/329 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N +G  ID    L   +L   I ++ P   ++    +  +TGI+VID+  P   G
Sbjct: 103 LGRMFNVVGDTIDKLPKLENVELR-SIHAEPPKFSDQTDSIELLETGIKVIDLLIPFAKG 161

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN---LK 215
            +IG+F G+G+GK+ ++     +       +S+   VGER RE  +    Y  +N   LK
Sbjct: 162 GKIGLFGGAGVGKTVVVQELIHNVAKRHSGLSIFVGVGERSREGNDLY--YEMENSGVLK 219

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274
            +V++    +E P  R     + + +AEYF  +   +VLL +D+I RF+ +  E++   G
Sbjct: 220 NTVLLFGQMNEVPGARLRVAFSGLAVAEYFRDELSKDVLLFIDNIFRFSQAGSEVSALLG 279

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
             P A GY  ++  E+ RL ERI  +  + G+IT+V +V V  D+  DP   ++ + LD 
Sbjct: 280 RTPSAVGYQPTLGYEMGRLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATIFTHLDA 337

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393
            +VL+R +A  G YP + PL S S L  +    +E   V++ +  ++ ++EE +DI  I 
Sbjct: 338 KVVLDRKIAALGIYPAISPLLSSSNLLTERVVGEEHYHVANEVVRVLQKYEELQDIISI- 396

Query: 394 GYRPGVDLILD---KAVHQVPIIYDFLKQ 419
               G+D + D   K V +   I +F  Q
Sbjct: 397 ---LGIDELTDEDKKLVFRARKIRNFFSQ 422


>gi|169261003|gb|ACA52101.1| ATP synthase beta subunit [Polypodium hesperium]
          Length = 312

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 22/284 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P  
Sbjct: 29  LGRISNVLGEPVD---NLGPVRSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 85

Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     + 
Sbjct: 86  RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 144

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  + 
Sbjct: 145 NEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 204

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 205 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 262

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 263 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 305


>gi|148245076|ref|YP_001219770.1| F0F1-type ATP synthase alpha subunit [Candidatus Vesicomyosocius
           okutanii HA]
 gi|158514263|sp|A5CVI8|ATPA_VESOH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146326903|dbj|BAF62046.1| F0F1-type ATP synthase alpha subunit [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 513

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 24/351 (6%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           +++  G  + +  D V    +G    I  GD+V    R    P      GRV+N LGK I
Sbjct: 56  SNNTFGMALNLEQDSVGAVILGDYLHILEGDIVKCTNRLVEVPVGEAMLGRVVNPLGKAI 115

Query: 114 DGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           DG   +  +G   +E+M+  P  ++R+ V++  +TGI+ ID   P+  GQR  +      
Sbjct: 116 DGKGDIDAQGVRPLEVMA--PGVIDRKSVDQPIQTGIKAIDAMVPVGRGQRELIIGDRQT 173

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDES 227
           GK+ +   ++  + D   + +   +G++   V   +   E+Y    L  +++VVA +  S
Sbjct: 174 GKTAVAIDAIINQRDSGIRCVYVAIGQKDSSVATVVRKLEEY--GALANTIIVVAGAAVS 231

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P L+ +AP     +AEYF  +G++VL++ D +T+ A + RE++      P    YP  VF
Sbjct: 232 PALQYIAPYAGCAMAEYFRDRGEDVLIVYDDLTKQAWAYREVSLLLKRPPGREAYPGDVF 291

Query: 288 SELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
               RLLER              G  + + G++TA+  +   G + +  +  +V SI DG
Sbjct: 292 YLHSRLLERASRVNADYVEKMTNGKVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDG 351

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            I L   L   G  P ++   SVSR+   A +   KKL   +   + ++ E
Sbjct: 352 QIFLETDLFNAGIRPAINVGLSVSRVGGAAQTNIIKKLGGGIRLDLAQYRE 402


>gi|15612127|ref|NP_223779.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori J99]
 gi|9910636|sp|Q9ZK79|ATPA_HELPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|4155639|gb|AAD06627.1| ATP synthase F1, subunit alpha [Helicobacter pylori J99]
          Length = 503

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 171/364 (46%), Gaps = 27/364 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 68  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 128 SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 186

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP   V
Sbjct: 187 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYAGV 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 245 AMGEYFRDHARHALIVYDDLSKHAVAYREISWILRRPPGREAFPGDVFYIHSRLLERAAK 304

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 305 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++   R+++    +   +D    K + +   + + L
Sbjct: 365 SRVGGAAQIKATKQVSGTLRLDLAQY---RELQAFTQFASDLDEASKKQLERGQRMVEVL 421

Query: 418 KQSP 421
           KQ+P
Sbjct: 422 KQAP 425


>gi|21633387|gb|AAM52168.1| ATP synthase beta subunit [Petrogenia repens]
          Length = 475

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 148/309 (47%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P               I    P  +        F+TGI+V+D+  P 
Sbjct: 87  GSTLGRIFNVLGEPXXXXXXXXX-XXXXPIHRSAPAFIQLDPKLSIFETGIKVVDLLAPY 145

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 146 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 205

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 206 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAG 265

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 266 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 323

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +    LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 324 TTFVHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 383

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 384 LQDIIAILG 392


>gi|126649257|ref|XP_001388301.1| ATP synthase alpha chain [Cryptosporidium parvum Iowa II]
 gi|126117395|gb|EAZ51495.1| ATP synthase alpha chain [Cryptosporidium parvum Iowa II]
          Length = 639

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 17/344 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V I  +G    I  GD V         P      GRV++ALG PIDG  S
Sbjct: 183 GMALNLENDHVGIVILGEDRNIRKGDQVISTNTIVNCPVGKELLGRVVDALGNPIDGKPS 242

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +   EI  K P  M+R+ + +   TGI+ ID   P+  GQR  +      GK++L+
Sbjct: 243 IISLE-KREIDVKAPGIMDRKPINEQLITGIKFIDSLIPIGLGQREAIVGDRQTGKTSLV 301

Query: 179 S--MFARSDCFDKV------IISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDES 227
              +  +   +D +      I   +G++   V + +   E Y  D LK ++V+ AT+  +
Sbjct: 302 LDIILNQRKFYDDIKTRKYCIYVAIGQKRSSVAQIVKILEKY--DALKYTIVIAATASNA 359

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP T  T+ E+F   G + +++ D +++ A++ R+I+      P    YP  +F
Sbjct: 360 ASLQFLAPFTGCTMGEWFRDNGQHCIIVYDDLSKQANAYRQISLLLRRPPGRESYPGDIF 419

Query: 288 SELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      EK  G++TA+  V    +  +  I  ++ SI DG IVL+  L  +
Sbjct: 420 YIHSRLLERSSKLSDEKGGGSLTALPIVETQSNKFSSFIPTNITSITDGQIVLDSDLFFK 479

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           G  P  +   S+SR+     +   KK+  ++   + +++E +  
Sbjct: 480 GNRPAFNLGLSISRIGSSTQNKSIKKVSQNIKLDLLQYKEFKQF 523


>gi|6319603|ref|NP_009685.1| Vma2p [Saccharomyces cerevisiae S288c]
 gi|586211|sp|P16140|VATB_YEAST RecName: Full=V-type proton ATPase subunit B; Short=V-ATPase
           subunit B; AltName: Full=V-ATPase 57 kDa subunit;
           AltName: Full=Vacuolar proton pump subunit B
 gi|496858|emb|CAA53486.1| ATPsv [Saccharomyces cerevisiae]
 gi|536413|emb|CAA85084.1| VMA2 [Saccharomyces cerevisiae]
 gi|51013767|gb|AAT93177.1| YBR127C [Saccharomyces cerevisiae]
 gi|151946518|gb|EDN64740.1| V-ATPase V1 sector subunit B [Saccharomyces cerevisiae YJM789]
 gi|190408717|gb|EDV11982.1| vacuolar ATP synthase subunit B [Saccharomyces cerevisiae RM11-1a]
 gi|256268967|gb|EEU04312.1| Vma2p [Saccharomyces cerevisiae JAY291]
 gi|285810459|tpg|DAA07244.1| TPA: Vma2p [Saccharomyces cerevisiae S288c]
 gi|290878142|emb|CBK39201.1| Vma2p [Saccharomyces cerevisiae EC1118]
 gi|323305958|gb|EGA59693.1| Vma2p [Saccharomyces cerevisiae FostersB]
 gi|323310082|gb|EGA63276.1| Vma2p [Saccharomyces cerevisiae FostersO]
 gi|323334586|gb|EGA75960.1| Vma2p [Saccharomyces cerevisiae AWRI796]
 gi|323338672|gb|EGA79888.1| Vma2p [Saccharomyces cerevisiae Vin13]
 gi|323349733|gb|EGA83948.1| Vma2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323356081|gb|EGA87886.1| Vma2p [Saccharomyces cerevisiae VL3]
 gi|1582514|prf||2118402B ATPsv gene
          Length = 517

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I  D  IV +     G ++    + F     RI  S    GR+ +  G+PID   
Sbjct: 65  GQVLEIRGDRAIVQVFEGTSGIDVKKTTVEFTGESLRIPVSEDMLGRIFDGSGRPIDNGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TG+  ID    +  GQ+I +F+ SG+  + +
Sbjct: 125 KVFAEDY-LDINGSPINPYARIYPEEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEI 183

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 184 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 243

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 244 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 303

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 304 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ 363

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 364 LHNKGIYPPINVLPSLSRLMKSA 386


>gi|328681709|gb|AEB32927.1| ATP synthase beta subunit [Bazzania yoshinagana]
          Length = 380

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 24/302 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG F
Sbjct: 1   GEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGSF 57

Query: 168 AGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--------K 215
            G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +         
Sbjct: 58  GGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINEQNISES 116

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
           K  +V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 117 KVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLG 176

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 177 RMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 234

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 235 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 293

Query: 393 GG 394
            G
Sbjct: 294 LG 295


>gi|227113925|ref|ZP_03827581.1| F0F1 ATP synthase subunit alpha [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227327858|ref|ZP_03831882.1| F0F1 ATP synthase subunit alpha [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|253690615|ref|YP_003019805.1| ATP synthase F1, alpha subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|261823736|ref|YP_003261842.1| F0F1 ATP synthase subunit alpha [Pectobacterium wasabiae WPP163]
 gi|259585432|sp|C6DJH0|ATPA_PECCP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|251757193|gb|ACT15269.1| ATP synthase F1, alpha subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|261607749|gb|ACX90235.1| ATP synthase F1, alpha subunit [Pectobacterium wasabiae WPP163]
          Length = 513

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG  +L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGALDHDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L+ +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALENT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERASRVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|289209748|ref|YP_003461814.1| ATP synthase F1 subunit alpha [Thioalkalivibrio sp. K90mix]
 gi|288945379|gb|ADC73078.1| ATP synthase F1, alpha subunit [Thioalkalivibrio sp. K90mix]
          Length = 513

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 187/418 (44%), Gaps = 31/418 (7%)

Query: 27  SSITSVYYTVTCLSQYVC----LGDFVVHQGKN----SDNLGQVIRINLDIVYICPVGIG 78
           SS  S   TV  L+  +     LGD  V QG+      D  G  + +  D V +  +G  
Sbjct: 22  SSEASTEGTVVSLTDGIARVHGLGD--VMQGEMIEFPGDTFGMALNLERDSVGVVILGDY 79

Query: 79  EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + I  GD     GR    P      GRV+++LG+PIDG   +  G ++  I    P  ++
Sbjct: 80  KHIKEGDTAKCTGRILEVPVGEGLLGRVVDSLGRPIDGKGPVDTG-VTSPIEKIAPGVID 138

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLV 195
           RQ V++  ++GI+ ID   P+  GQR  +      GK+ +   ++  + D   K I   V
Sbjct: 139 RQSVDQPLQSGIKAIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKDSGVKCIYVAV 198

Query: 196 GERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V   +        ++ +++V A + ES  ++ +AP     + EYF  +G++ L+
Sbjct: 199 GQKASSVASVVAKLEEAGAMENTIIVAANASESAAMQFIAPYAGCAMGEYFRDRGEDALI 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSE 301
           + D +T+ A + R+++      P    YP  VF    RLLER              G  +
Sbjct: 259 VYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERASRVNADYVEQLTNGEVK 318

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G++TA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR+ 
Sbjct: 319 GQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGLSVSRVG 378

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             A +   KKL   +   + ++   R++     +   +D +  K + +   + + +KQ
Sbjct: 379 GAAQTKIIKKLGGGVRLALAQY---RELAAFSQFASDLDELTRKQLDRGKRVTELMKQ 433


>gi|156739704|gb|ABU93505.1| ATP synthase beta subunit [Cyrtomium fortunei]
          Length = 394

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 271 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|156739698|gb|ABU93502.1| ATP synthase beta subunit [Polystichum neolobatum]
          Length = 394

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE      E  E  
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +    N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 210 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +     + +E       +   + R+
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIAGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|289668191|ref|ZP_06489266.1| type III secretion system ATPase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 160

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 2/146 (1%)

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RG+P SVF+ELPRLLER G  E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+
Sbjct: 1   RGFPPSVFAELPRLLERAGMGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILS 58

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R +A + +YP +D L S+SR+  +    ++ +    L  L+ ++ +   +  +G YR G 
Sbjct: 59  REIAAKNQYPAIDVLGSLSRVMSQIVPPEQSQAAGQLRRLLAKYNDVETLLQVGEYREGS 118

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLS 425
           D   D+A+ ++  I DFL Q    LS
Sbjct: 119 DATADEAIARIDAIRDFLCQPTDQLS 144


>gi|164656905|ref|XP_001729579.1| hypothetical protein MGL_3123 [Malassezia globosa CBS 7966]
 gi|159103472|gb|EDP42365.1| hypothetical protein MGL_3123 [Malassezia globosa CBS 7966]
          Length = 495

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 157/333 (47%), Gaps = 22/333 (6%)

Query: 60  GQVIRI--NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  N  IV +     G ++    +       ++  S    GRV N  GKP+D   
Sbjct: 48  GQVLEVSGNKAIVQVFEGTSGIDVKDTHIELTKSSMKLPVSEDMLGRVFNGSGKPVDNGP 107

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+  +TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 108 RVFAEDF-LDINGSPINPYARAYPEEMIQTGISTIDTMNSIARGQKIPIFSASGLPHNEI 166

Query: 178 LSMFARS----------------DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220
            +   R                 D F  ++ + +G      R F +D+  + +L +  + 
Sbjct: 167 AAQICRQAGLVKKPGKGVHDDHEDNF-TIVFAAMGVNMETARFFKQDFEENGSLDRVTLF 225

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279
           +  +++  I R + P  A+T AEYF+ + + +VL+++  +T +A ++RE++    E+P  
Sbjct: 226 LNLANDPTIERIITPRLALTTAEYFAYQLEKHVLVVMTDMTSYADALREVSAAREEVPGR 285

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++
Sbjct: 286 RGYPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDMTHPIPDLTGYITEGQIYVD 345

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           R L     YPP++ L S+SRL   A  A   ++
Sbjct: 346 RHLHNRQVYPPINVLPSLSRLMKSAIGAKHTRV 378


>gi|25808451|gb|AAN74352.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808473|gb|AAN74363.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEYSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|300113693|ref|YP_003760268.1| H(+)-transporting two-sector ATPase [Nitrosococcus watsonii C-113]
 gi|299539630|gb|ADJ27947.1| H(+)-transporting two-sector ATPase [Nitrosococcus watsonii C-113]
          Length = 593

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 25/282 (8%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P   R+       TG R++D F PL  G +  V    G GK+ +    AR    D VI  
Sbjct: 198 PYQQREHGVAPLMTGQRILDTFFPLLKGGKAAVPGPFGAGKTMVQQQIARWSNADIVIYV 257

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ E ++ +        G +L +  ++VA +   P++ + A L   VT+ EY+
Sbjct: 258 GCGERGNELVEVLDSFPELTDPHTGRSLMERTLLVANTSNMPVVAREASLYVGVTLGEYY 317

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +V+++ DS +R+A ++RE+A   G++PV  GYP  + S L    ER G  +   G
Sbjct: 318 RDQGYDVVIVADSTSRWAEALREVAGRLGQMPVEEGYPAYLASRLAAFYERAGRVQTLGG 377

Query: 306 NITAVI---SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV-------DPLA 355
           N+ +V    +V   G + ++P+    + I+     L++ LA+   YP V       D +A
Sbjct: 378 NVGSVTLIGAVSPPGGDFSEPVTSHTKEIVRTFWALSKELADARHYPAVSWRESFSDDIA 437

Query: 356 SVSRLA----DKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             +R      DK W A   +   ++T L    E +R + L+G
Sbjct: 438 VAARWWAEQIDKHWQAGRAE---AMTLLTQAEELSRIVNLVG 476


>gi|119952895|ref|YP_945104.1| V-type ATP synthase subunit B [Borrelia turicatae 91E135]
 gi|254764985|sp|A1QYP2|VATB_BORT9 RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|119861666|gb|AAX17434.1| V-type sodium ATP synthase subunit B [Borrelia turicatae 91E135]
          Length = 433

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T ++Q V  G+  + + K+S +L +VI+++ D V +        IS  D V   G   +
Sbjct: 16  ITVMAQNVKYGELAIVRSKDSSSLAEVIKLDRDKVSLQVYNGTIGISTADEVKFLGHPMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           ++ S    GR+ +  G P DG   L + DL +EI    P A   +R+      +TGI +I
Sbjct: 76  VTFSENLLGRIFDGAGNPKDGGPRL-EDDL-IEIGG--PSANPAKRIVPRNMIRTGIPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +DYL  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLIRIALQAEVDLIILGGMGLKNDDYLTF-KDYLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++  +     P  ++ +AE F+ +G  VL++L  +T FA +++EIA
Sbjct: 191 GGALSRTIFFVNTANDPVVESLTVPDISLAVAEKFALQGKKVLVLLTDMTNFADAMKEIA 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLASRYEKAIDFEG-AGSITILAVTTMPGDDITHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ ++  L    +E+ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNGKTRDDHRTIMDAMIKLYASSKESIEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|50306985|ref|XP_453470.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642604|emb|CAH00566.1| KLLA0D09152p [Kluyveromyces lactis]
          Length = 517

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  IV +     G ++    + F     RI  S    GR+ +  G+PID   
Sbjct: 66  GQVLEVRGDRAIVQVFEGTSGIDVKKTTVEFTGENLRIPVSEDALGRIFDGSGRPIDNGP 125

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 126 KVFAEDY-LDINGSAINPYARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 184

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 185 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 244

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 245 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 304

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 305 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQISVDRQ 364

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 365 LDNKGIYPPINVLPSLSRLMKSA 387


>gi|50123430|ref|YP_052597.1| F0F1 ATP synthase subunit alpha [Pectobacterium atrosepticum
           SCRI1043]
 gi|81692999|sp|Q6CYJ3|ATPA_ERWCT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49613956|emb|CAG77409.1| ATP synthase alpha chain [Pectobacterium atrosepticum SCRI1043]
          Length = 513

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG  +L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGALDHDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L+ +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALENT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERASRVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|23100432|ref|NP_693899.1| F0F1 ATP synthase subunit alpha [Oceanobacillus iheyensis HTE831]
 gi|81745357|sp|Q8EM81|ATPA_OCEIH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|22778665|dbj|BAC14933.1| H(+)-transporting ATP synthase alpha chain [Oceanobacillus
           iheyensis HTE831]
          Length = 503

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 177/396 (44%), Gaps = 36/396 (9%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ IV + P     EI  GD V   GR    P      GRV+N LG+PIDG   + +   
Sbjct: 70  NVGIVILGPY---TEIKEGDEVRRTGRIMQVPVGEELLGRVVNPLGQPIDGKGPI-ETSK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  I +  P  M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 126 TRPIEAAAPGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAVDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA-TSDESPILRKMAPLTAVT 240
           + D     I   +G++   VR  +E +     L+ ++VV A  SD +P+L  ++P   V 
Sbjct: 186 QKDQDMICIYVAIGQKESTVRNTVETFRKHGALENTIVVTAGASDPAPLLY-LSPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVIYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 304

Query: 301 EKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     +    I  +V SI DG I L   L   G  P ++P  SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDIAAYIPTNVISITDGQIFLQSDLFFSGVRPAINPGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG-------------GYRPGVDLILDK 405
           R+   A     KK+  +L   +  F E       G             G R     +L +
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASFRELEAFSQFGSDLDKSTQAKLNRGQR--TVEVLKQ 422

Query: 406 AVH-------QVPIIYDFLKQSPSDLSSEDV--FQE 432
            +H       QV IIY   +    D+  ED+  F+E
Sbjct: 423 GLHKPMVVEKQVAIIYSLTRGFLDDIPVEDIQRFEE 458


>gi|113475840|ref|YP_721901.1| F0F1 ATP synthase subunit alpha [Trichodesmium erythraeum IMS101]
 gi|123160854|sp|Q112Z6|ATPA_TRIEI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110166888|gb|ABG51428.1| ATP synthase F1, alpha subunit [Trichodesmium erythraeum IMS101]
          Length = 505

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 156/346 (45%), Gaps = 18/346 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G   + Q    DN+G V+           +G G EI  G  V   GR    P      GR
Sbjct: 59  GTVGIAQNLEEDNVGAVL-----------MGEGREIQEGSAVTATGRIAQVPVGDALVGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG+PIDG   +   D S  + S  P  ++R+ V +  +TGI  ID   P+  GQR 
Sbjct: 108 VVDGLGRPIDGKGEMKTTD-SRLLESPAPGIIDRRSVYEPMQTGITAIDSMIPIGRGQRE 166

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+ + +         D + + + +G++   V + +        L  +V+V 
Sbjct: 167 LIIGDRQTGKTAIAIDTIINQKGEDVICVYVAIGQKASTVAQVVGTLEEKGALDYTVIVA 226

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + +   L+ +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    
Sbjct: 227 ANASDPATLQYLAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQVSLLLRRPPGREA 286

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 287 YPGDVFYLHSRLLERAAKLNDKLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLS 346

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             L   G  P V+   SVSR+   A +   KK+   +   + +F E
Sbjct: 347 SDLFNAGFRPAVNAGISVSRVGSAAQTKAIKKVAGKIKLELAQFAE 392


>gi|283794874|ref|YP_003359227.1| ATP synthase CF1 alpha subunit [Cryptomonas paramecium]
 gi|253981846|gb|ACT46763.1| ATP synthase CF1 alpha subunit [Cryptomonas paramecium]
          Length = 506

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 170/354 (48%), Gaps = 20/354 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           V +G+ V  + +    LG V+ + ++ V I  +G    I  G  V   G+    P    +
Sbjct: 48  VMMGELVEFEDRT---LGIVLNLEVNNVGIMILGNSRTIIEGTSVKATGKIAHIPVGKNY 104

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV-PPA---MNRQRVEKGFKTGIRVIDIFTP 157
            GR+I+ALG P+DG     KGD+  E  S + PPA   ++R  + +   TGI  ID   P
Sbjct: 105 LGRIIDALGNPVDG-----KGDIYTEDTSLIEPPAPGIISRAPITEPIHTGIITIDSMIP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-- 213
           +  GQR  +      GK++L   ++  + D     I   +G++   VR  I   L +   
Sbjct: 160 IGRGQRELIIGDRQTGKTSLAIDTILNQKDEGVICIYIAIGQKASSVRS-IAHILQEKGA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+ + ++ A+S+ES  L+ +AP T   I EYF  +G +VL+I D +++ A + R+++   
Sbjct: 219 LEYTTILSASSEESAALQYIAPYTGTAIGEYFMHQGQSVLIIYDDLSKHATAYRQLSLIL 278

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    YP  VF    +LLER      +   G+ITA+  +     + +  I  +V SI
Sbjct: 279 RRPPGREAYPGDVFYAHSKLLERSAKLNPKLGGGSITAIPIIETQASDVSAYIPTNVISI 338

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            DG I L+  L   G  P ++   SVSR+   A +   KK+   L   + +F E
Sbjct: 339 TDGQIFLSGDLFNSGVRPAINIGISVSRVGSSAQTKAIKKISGKLKLELSQFYE 392


>gi|71894422|ref|YP_278530.1| F0F1 ATP synthase subunit alpha [Mycoplasma synoviae 53]
 gi|115312255|sp|Q4A602|ATPA_MYCS5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71851210|gb|AAZ43819.1| ATP synthase alpha chain [Mycoplasma synoviae 53]
          Length = 530

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 162/342 (47%), Gaps = 17/342 (4%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           ++D  G  + +  + V +   G    IS GD V   G+    P       RV+++LGKPI
Sbjct: 56  DNDVYGLALNLEEEAVGVALFGNSNLISEGDSVRRSGQVISVPVGEAMLSRVVDSLGKPI 115

Query: 114 DGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           DG     KG +    M+K+    P  M R+ V +  +TGI  ID   P+  GQR  +   
Sbjct: 116 DG-----KGPIKSSKMAKIFKLAPGVMTRKEVNQPLETGIIAIDSMIPVGKGQRELIIGD 170

Query: 170 SGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSD 225
              GK+ +   ++  +       +   +G++   V + ++  L D  ++  + VVVA + 
Sbjct: 171 RQTGKTAIAIDTIINQKGKNVYCVYVAIGQKNSTVAQIVQK-LNDTGSMDYTTVVVAGAS 229

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           ES   + +AP T VTIAE F S+G +VL+I D +++ A + R ++      P    YP  
Sbjct: 230 ESAPQQYIAPYTGVTIAEEFMSQGKDVLVIYDDLSKHAIAYRTLSLLLRRPPGREAYPGD 289

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    +LLER     K+   G+ITA   +     + +  I  +V SI DG I    SL 
Sbjct: 290 VFYLHSQLLERAARLNKKYGGGSITAFPIIETQQGDISAYIPTNVISITDGQIFTKESLF 349

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             G+ P VD   SVSR+   A +   K +V SL   + ++ E
Sbjct: 350 NSGQRPAVDVGFSVSRVGSAAQTKAMKSVVGSLKLELAQYNE 391


>gi|95928950|ref|ZP_01311695.1| ATP synthase F1, alpha subunit [Desulfuromonas acetoxidans DSM 684]
 gi|95134851|gb|EAT16505.1| ATP synthase F1, alpha subunit [Desulfuromonas acetoxidans DSM 684]
          Length = 506

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 152/332 (45%), Gaps = 7/332 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G    ++ D V +  +G  + +  GD     GR    P      GRVIN LG P+D    
Sbjct: 65  GIAFNVDADEVGVVLLGDYQYLHTGDEARRSGRVMDVPVGETLIGRVINPLGAPLDQQGP 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      + I    P  M R  V     TGI+V+D   P+  GQR  +      GK+ + 
Sbjct: 125 VNN-QHRLPIERPAPAIMERAPVTTPLHTGIKVVDALVPIGRGQRELILGDRQTGKTAIA 183

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
             ++  +     + +   +G+R   V   I +      +  +VV+VA  ++ P L  +AP
Sbjct: 184 IDTILNQKGKNVRCVYCAIGQRSAAVARVIAELERRGAMDYTVVMVAEGNDPPGLSYIAP 243

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A TIAE F  +GD+VL++ D +T  A + RE++      P    +P  +F    RLLE
Sbjct: 244 YAATTIAEEFMRQGDDVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLE 303

Query: 296 RIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +  +  N +  I  ++ SI DG + L+ +L E G  P +D 
Sbjct: 304 RATHLHPDHGGGSLTALPIIETEAQNMSAYIPTNLISITDGQLYLSPTLFELGALPAIDV 363

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+  KA     +++  +L     +FEE
Sbjct: 364 GKSVSRVGGKAQLEAYRRIAGNLKLAYAQFEE 395


>gi|171909873|ref|ZP_02925343.1| ATP synthase F1, beta subunit [Verrucomicrobium spinosum DSM 4136]
          Length = 471

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ +  GKP+D    +        I    P  +++       +TGI+VID+  P   G
Sbjct: 92  LGRIFDVTGKPVDEKGPVNATKY-YPIHRPAPKLVDQDPSAAILETGIKVIDLICPFTKG 150

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            + G F G+G+GK+     L++  A++     V    VGER RE  +   + +       
Sbjct: 151 GKAGAFGGAGVGKTVVILELINNIAKAHGGFSVFAG-VGERSREGNDLYHEMIDSGVIKP 209

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
           DNLK+S V  V    +E P  R    L+A+++AEYF   K  +VLL +D++ RF+ +  E
Sbjct: 210 DNLKESKVALVYGQMNEPPGARLRVALSALSMAEYFRDEKNQDVLLFVDNVFRFSQAGSE 269

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G  P A GY  ++ SE+  + ERI  +  ++G+IT+V +V V  D+  DP   + 
Sbjct: 270 VSALLGRTPSAVGYQPTLASEMGAMQERI--TSTKQGSITSVQAVYVPADDLTDPAPANT 327

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD  +VL RSLAE G YP VDPLASVS+ LA      +  ++   +  ++ R+++ +
Sbjct: 328 FAHLDSTVVLERSLAELGIYPAVDPLASVSKALAPDIVGEEHYRVARGVQRVLQRYKDLQ 387

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 388 DIIAILG 394


>gi|294155620|ref|YP_003560004.1| ATP synthase F1, alpha subunit [Mycoplasma crocodyli MP145]
 gi|291599905|gb|ADE19401.1| ATP synthase F1, alpha subunit [Mycoplasma crocodyli MP145]
          Length = 527

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 162/338 (47%), Gaps = 9/338 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           N    G  + +  ++V +   G    IS GD+V   G+   ++      GRVI++LG PI
Sbjct: 56  NDSTYGLALNLEEEVVGVTIFGDITSISEGDIVKRTGKVISVAVGDKLLGRVIDSLGNPI 115

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + K + + EI       M+R+ V +  +TGI  ID   P+  GQR  +      G
Sbjct: 116 DGKGPI-KSNKTREIFRVASGVMSRKEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTG 174

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPI 229
           K+ +   ++  + D     +   +G++   V + ++  L D   L+ + +VV+ + E   
Sbjct: 175 KTAIAIDTIINQKDKNVNCVYVAIGQKNSTVAQIVKK-LADTGALEYTTIVVSGASELAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
            + +AP T VTIAE +  KG +VL++ D +++ A + R ++      P    YP  VF  
Sbjct: 234 QQYIAPYTGVTIAEEWMEKGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             +LLER     +E   G+ITA+  +     + +  I  +V SI DG I    +L   G+
Sbjct: 294 HSQLLERAARVTQENGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQ 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P VD   SVSR+   A     KK+V SL   + ++ E
Sbjct: 354 RPAVDVGFSVSRVGSAAQIKAMKKVVGSLKLELAQYNE 391


>gi|290473118|ref|YP_003465979.1| membrane-bound ATP synthase, F1 sector subunit alpha [Xenorhabdus
           bovienii SS-2004]
 gi|289172412|emb|CBJ79179.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 148/300 (49%), Gaps = 19/300 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  +L     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGALENDGFSPVEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  V      GK+ L   ++  + D   K I   +G++   +   +      N L  ++
Sbjct: 163 QRELVIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHNALANTI 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+++      P 
Sbjct: 223 VVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER              G  + + G++TA+  +     + +  + 
Sbjct: 283 REAFPGDVFYLHSRLLERAARVNADYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVP 342

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 343 TNVISITDGQIFLESALFNAGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|189314223|gb|ACD89011.1| ATP synthase beta subunit [Cissampelos owariensis]
          Length = 384

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 156/331 (47%), Gaps = 30/331 (9%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 35  KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 95  IFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 151

Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +     +    
Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEQ 210

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 211 NIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 270

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 271 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 328

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           + LD   VL+R L  +G YP VDPL   S +
Sbjct: 329 AHLDATTVLSRGLGAKGIYPAVDPLDXXSTM 359


>gi|227548010|ref|ZP_03978059.1| F0F1 ATP synthase subunit alpha [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227079916|gb|EEI17879.1| F0F1 ATP synthase subunit alpha [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 555

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 179/379 (47%), Gaps = 26/379 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    +  D + +  +G  E ++ GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 74  IGVAQNLETDSIGVVVLGNFETLTEGDEVKRTGEVLSIPVGEDFLGRVINPLGQPIDG-- 131

Query: 118 SLGKGDLSMEIMSKVPPA--MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            LG  + S E   ++  A  ++RQ VE+   TG++ ID  TP+  GQR  +      GK+
Sbjct: 132 -LGPIEASEERALELQAAGVLDRQPVEEPMATGMKAIDAMTPIGRGQRQLIIGDRKTGKT 190

Query: 176 -----TLLSMFARSDCFD-----KVIISLVGERGRE---VREFIEDYLGDNLKKSVVVVA 222
                T+L+  A  +  D     + I   +G++G     VR  +E++    L+ + +V A
Sbjct: 191 AVCIDTILNQKAFWESGDPSKQVRCIYVAIGQKGSTIAGVRRTLEEH--GALEYTTIVAA 248

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + +S   + +AP +A  + +++  +G +VL+I D +T+ A + R I+      P    Y
Sbjct: 249 PASDSAGFKWLAPFSAAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAY 308

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E   G++TA+  +    ++ +  I  +V SI DG + L  
Sbjct: 309 PGDVFYLHSRLLERAAKLNDELGAGSLTALPIIETKANDVSAFIPTNVISITDGQVFLQS 368

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P +D   SVSR+   A +   KK+  SL   +  +   RD+     +   +D
Sbjct: 369 DLFNQGVRPAIDVGISVSRVGGAAQTKGMKKVAGSLRLDLAAY---RDLEAFAAFASDLD 425

Query: 401 LILDKAVHQVPIIYDFLKQ 419
               + + +   + + LKQ
Sbjct: 426 SASKRQLERGQRLVELLKQ 444


>gi|238797875|ref|ZP_04641367.1| hypothetical protein ymoll0001_940 [Yersinia mollaretii ATCC 43969]
 gi|238718291|gb|EEQ10115.1| hypothetical protein ymoll0001_940 [Yersinia mollaretii ATCC 43969]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVSNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|149384575|gb|ABR25110.1| ATP synthase beta chain [Hypodematium crenatum]
          Length = 426

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLPAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|212696101|ref|ZP_03304229.1| hypothetical protein ANHYDRO_00637 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676730|gb|EEB36337.1| hypothetical protein ANHYDRO_00637 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 585

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 121/228 (53%), Gaps = 11/228 (4%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RV+DIF P+  G  + +  G G GK+ L    A+    D +I    GERG E+ + +
Sbjct: 210 TGQRVLDIFFPIAKGGTVAIPGGFGTGKTMLQHQLAQYSNADIIIYIGCGERGNEMTQVL 269

Query: 207 EDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNVLLILDS 258
           ED+        G  L +  +++A +   P+  + A + T +T+AEYF   G +V L+ DS
Sbjct: 270 EDFPDLIDPNTGRGLMERTILIANTSNMPVAAREASIYTGITMAEYFRDMGYDVALMADS 329

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK---EKGNITAVISVLV 315
            +R+A ++REI+    E+P   GYP  + S L +  ER G  +      G++T + +V  
Sbjct: 330 TSRWAEALREISARLEEIPAEEGYPAYLGSRLSQFYERAGDFDNLNGSHGSVTLIGAVSP 389

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G + ++P+ ++ R  ++  + L+++LA    YP ++ L S S   ++
Sbjct: 390 TGGDFSEPVTENTRRSVNVFLGLDKNLAYSRHYPAINWLTSYSNYLNQ 437


>gi|122051533|gb|ABM65869.1| ATP synthase beta chain [Grammitis jagoriana]
          Length = 410

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 62  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 119

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 120 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 179

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 180 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 239

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++     +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 240 VSALLDRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 297

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 298 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 356

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 357 QDIIAILG 364


>gi|326693457|ref|ZP_08230462.1| F0F1 ATP synthase subunit alpha [Leuconostoc argentinum KCTC 3773]
          Length = 504

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 150/323 (46%), Gaps = 9/323 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+NALG+PIDG   + K D +  +
Sbjct: 71  VGIIILGDYDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGMGEI-KTDKTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDC 186
             K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK++L   ++  + D 
Sbjct: 130 EVKAPGVMERKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAMDTILNQKDQ 189

Query: 187 FDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              VI   +G++   VR  +E    LG      VV    S+ +P+L  +AP     + E 
Sbjct: 190 DMIVIYVAIGQKDSTVRTQVETLRQLGAMDYTIVVNAGPSEPAPMLY-LAPYVGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G NVL++ D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 249 FMYNGKNVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDEL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+  
Sbjct: 309 GGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLDAEQFYAGVRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEE 385
            A     KK+  +L   +  F E
Sbjct: 369 DAQIKAMKKVAGTLRLDLASFRE 391


>gi|154424981|emb|CAL18593.1| ATP synthase alpha subunit [Streptococcus sobrinus]
          Length = 324

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 149/312 (47%), Gaps = 7/312 (2%)

Query: 80  EISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           EI+ GD V   G+    P      GRV+N LG+P+DG   + K D +  + +  P  M R
Sbjct: 1   EITEGDTVKRTGKIMEVPVGPELIGRVVNPLGQPVDGLGDI-KTDKTRPVETPAPGVMQR 59

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVG 196
           + V +  +TG++ ID   P+  GQR  V      GK+++   ++  + D     I   +G
Sbjct: 60  KSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAIDAILNQKDQDMICIYVAIG 119

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   VR  +E       L  ++VV A++ +   L  +AP   V +AE F   G +VL++
Sbjct: 120 QKESTVRTQVETLRKYGALDYTIVVTASASQPSPLVYIAPYAGVAMAEEFMYNGKHVLIV 179

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + RE++      P    YP  VF    RLLER      E   G+ITA+  +
Sbjct: 180 YDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFI 239

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  IA +V SI DG I L  +L   G  P +D  +SVSR+   A     KK+ 
Sbjct: 240 ETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVA 299

Query: 374 SSLTHLIHRFEE 385
            +L   +  + E
Sbjct: 300 GTLRLDLASYRE 311


>gi|238783020|ref|ZP_04627047.1| hypothetical protein yberc0001_3780 [Yersinia bercovieri ATCC
           43970]
 gi|238787864|ref|ZP_04631661.1| hypothetical protein yfred0001_26560 [Yersinia frederiksenii ATCC
           33641]
 gi|238716021|gb|EEQ08006.1| hypothetical protein yberc0001_3780 [Yersinia bercovieri ATCC
           43970]
 gi|238724207|gb|EEQ15850.1| hypothetical protein yfred0001_26560 [Yersinia frederiksenii ATCC
           33641]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVSNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|328681637|gb|AEB32891.1| ATP synthase beta subunit [Telaranea tetradactyla]
          Length = 371

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 27  FETGIKVVDLSAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 86

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 87  GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 146

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 147 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 204

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 205 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 263

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 264 ETAQGVKQTLQRYKELQDIIAILG 287


>gi|290745877|gb|ADD51607.1| ATP synthase beta chain [Melpomene sp. ML-2008e]
          Length = 368

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 28/302 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPL 158
           GR+ N LG+P+D       G +   ++S +    PA  +   +   F+TGI+V+D+  P 
Sbjct: 74  GRIFNVLGEPVDN-----LGPVRSSVISPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 128

Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
             G +IG+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +
Sbjct: 129 RRGGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKV 187

Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
                    K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +
Sbjct: 188 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 247

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 248 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 305

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R+
Sbjct: 306 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 364

Query: 384 EE 385
           +E
Sbjct: 365 KE 366


>gi|149384495|gb|ABR25070.1| ATP synthase beta chain [Bolbitis auriculata]
          Length = 426

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L    ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLTTESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 213 AGSEVSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|27468620|ref|NP_765257.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis ATCC
           12228]
 gi|57867651|ref|YP_189276.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis RP62A]
 gi|251812182|ref|ZP_04826655.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876487|ref|ZP_06285353.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis SK135]
 gi|293366069|ref|ZP_06612757.1| ATP synthase F1 sector alpha subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38604811|sp|Q8CNJ5|ATPA_STAES RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81170377|sp|Q5HMB7|ATPA_STAEQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|27316167|gb|AAO05301.1|AE016749_247 ATP synthase alpha chain [Staphylococcus epidermidis ATCC 12228]
 gi|57638309|gb|AAW55097.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis RP62A]
 gi|251804279|gb|EES56936.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294739|gb|EFA87267.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis SK135]
 gi|291319792|gb|EFE60150.1| ATP synthase F1 sector alpha subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329734129|gb|EGG70447.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU045]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P    EEIS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---EEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|329726169|gb|EGG62641.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU144]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P    EEIS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---EEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|150187290|emb|CAK30218.1| ATP synthase alpha subunit [Streptococcus sobrinus]
          Length = 343

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 149/312 (47%), Gaps = 7/312 (2%)

Query: 80  EISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           EI+ GD V   G+    P      GRV+N LG+P+DG   + K D +  + +  P  M R
Sbjct: 17  EITEGDTVKRTGKIMEVPVGPELIGRVVNPLGQPVDGLGDI-KTDKTRPVETPAPGVMQR 75

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVG 196
           + V +  +TG++ ID   P+  GQR  V      GK+++   ++  + D     I   +G
Sbjct: 76  KSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAIDAILNQKDQDMICIYVAIG 135

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   VR  +E       L  ++VV A++ +   L  +AP   V +AE F   G +VL++
Sbjct: 136 QKESTVRTQVETLRKYGALDYTIVVTASASQPSPLVYIAPYAGVAMAEEFMYNGKHVLIV 195

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + RE++      P    YP  VF    RLLER      E   G+ITA+  +
Sbjct: 196 YDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFI 255

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  IA +V SI DG I L  +L   G  P +D  +SVSR+   A     KK+ 
Sbjct: 256 ETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVA 315

Query: 374 SSLTHLIHRFEE 385
            +L   +  + E
Sbjct: 316 GTLRLDLASYRE 327


>gi|315038010|ref|YP_004031578.1| F0F1 ATP synthase subunit alpha [Lactobacillus amylovorus GRL 1112]
 gi|325956463|ref|YP_004291875.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus 30SC]
 gi|312276143|gb|ADQ58783.1| F0F1 ATP synthase subunit alpha [Lactobacillus amylovorus GRL 1112]
 gi|325333028|gb|ADZ06936.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus 30SC]
 gi|327183290|gb|AEA31737.1| F0F1 ATP synthase subunit alpha [Lactobacillus amylovorus GRL 1118]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 173/381 (45%), Gaps = 19/381 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           I+ +  V Y    +++   L D +  +    DN    I  NL+   V I  +G  + I  
Sbjct: 25  INEVGVVTYVGDGIARAHGLNDVLAGELLKFDNGSYGIAQNLESNDVGIIILGQFDNIRE 84

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG+  + K D +  I +K P  M+RQ V+
Sbjct: 85  GDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGEGEI-KADKTRPIEAKAPGVMDRQSVK 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + +G++  
Sbjct: 144 QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQDVICIYVAIGQKES 203

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 204 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLI 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER    S+K   G++TA+  
Sbjct: 259 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPI 318

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 319 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 378

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             +L   +  + E       G
Sbjct: 379 AGTLRTDLAAYRELESFAQFG 399


>gi|238750326|ref|ZP_04611828.1| hypothetical protein yrohd0001_12620 [Yersinia rohdei ATCC 43380]
 gi|238711559|gb|EEQ03775.1| hypothetical protein yrohd0001_12620 [Yersinia rohdei ATCC 43380]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|118586238|ref|ZP_01543698.1| ATP synthase, alpha subunit [Oenococcus oeni ATCC BAA-1163]
 gi|118433322|gb|EAV40028.1| ATP synthase, alpha subunit [Oenococcus oeni ATCC BAA-1163]
          Length = 520

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 9/323 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + IS GD V   G+    P      GRV+NALG+PIDG+ ++ K   +  +
Sbjct: 71  VGIIVLGDFDGISQGDTVKRTGKVMEVPVGDEMIGRVVNALGQPIDGNGAI-KTKHTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDC 186
             K P  M R+ V +  +TGI+VID   P+  GQR  +      GK++L   ++  + D 
Sbjct: 130 EFKAPGVMQRKSVFEPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKDQ 189

Query: 187 FDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              V+   +G++   VR  +E    +G  L  ++VV A   E   +  +AP     + EY
Sbjct: 190 DMIVVYVAIGQKDSTVRTQVETLREMG-ALDYTIVVSAGPSEPAPMLYLAPYVGAALGEY 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 249 FMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDEL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+  
Sbjct: 309 GGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLDADQFYSGNRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEE 385
            A     KK+  +L   +  + E
Sbjct: 369 DAQIKAMKKVSGTLRLDLASYHE 391


>gi|15606090|ref|NP_213467.1| F0F1 ATP synthase subunit alpha [Aquifex aeolicus VF5]
 gi|3913127|sp|O66907|ATPA_AQUAE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|2983261|gb|AAC06855.1| ATP synthase F1 alpha subunit [Aquifex aeolicus VF5]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 193/434 (44%), Gaps = 25/434 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           ++ LE L Q  +D+          +  +  VYY    +++   L + +  +        Q
Sbjct: 7   EEALEILRQQIKDFEPE-----AKMEEVGVVYYVGDGVARAYGLENVMAMEIVEFQGGQQ 61

Query: 62  VIRINL--DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
            I  NL  D V I  +G    I  G +V   GR   +P      GRVI+ LG P+DG   
Sbjct: 62  GIAFNLEEDNVGIIILGSETGIEEGHIVKRTGRILDAPVGEGLVGRVIDPLGNPLDG--- 118

Query: 119 LGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KG +  E  S V    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 119 --KGPIQFEYRSPVEKIAPGVVKRKPVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGK 176

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
           +T+   ++ A+ +     I   VG++   +   IE    +  ++ + VVVA++ +   L+
Sbjct: 177 TTVAIDTILAQKNSDVYCIYVAVGQKRAAIARLIELLEREGAMEYTTVVVASASDPASLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    TI EYF   G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPFVGCTIGEYFRDNGKHALIIYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     +    I  +V SI DG I L   L  +G  P
Sbjct: 297 RLLERAAKLNDDLGAGSLTALPIIETKAGDVAAYIPTNVISITDGQIYLEADLFNKGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + +F   R++     +   +D    + +++
Sbjct: 357 AINVGLSVSRVGGAAQIKAMKQVAGTLRLELAQF---RELEAFVQFASELDKATQQQINR 413

Query: 410 VPIIYDFLKQSPSD 423
              + + LKQ P +
Sbjct: 414 GLRLVELLKQEPYN 427


>gi|156739764|gb|ABU93535.1| ATP synthase beta subunit [Lithostegia foeniculacea]
          Length = 373

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P  
Sbjct: 18  LGRISNVLGEPVD---NLGPVLSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 74

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L++    +       +S  G  G   RE  + Y+         
Sbjct: 75  RGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSASGGVGERTREGNDLYMEMKESKVIN 134

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 135 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 194

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 195 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 252

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R++E
Sbjct: 253 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQRYKE 311

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 312 LQDIIAILG 320


>gi|238753978|ref|ZP_04615337.1| hypothetical protein yruck0001_28990 [Yersinia ruckeri ATCC 29473]
 gi|238707730|gb|EEQ00089.1| hypothetical protein yruck0001_28990 [Yersinia ruckeri ATCC 29473]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTQGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|238765109|ref|ZP_04626043.1| hypothetical protein ykris0001_18570 [Yersinia kristensenii ATCC
           33638]
 gi|238696661|gb|EEP89444.1| hypothetical protein ykris0001_18570 [Yersinia kristensenii ATCC
           33638]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|14717954|gb|AAK72719.1| ATP synthase beta subunit [Barnadesia caryophylla]
          Length = 283

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 19/266 (7%)

Query: 109 LGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LGKP+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGKPVD---NLGPVDTSXTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRL 360
             VL+R LA +G YP VDPL S S +
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTM 262


>gi|6017812|gb|AAF01640.1| ATP synthase beta subunit [Myrothamnus flabellifolia]
          Length = 479

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 149/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D          S  I    P  +        F+TGI+V+D+  P 
Sbjct: 85  GATLGRIFNVLGEPVDNLGPXXXXTXS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 143

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 144 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 203

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 204 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 263

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 264 SEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 321

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+  LA +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 322 TTFAHLDATTVLSXGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 381

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 382 LQDIIAILG 390


>gi|332533716|ref|ZP_08409575.1| ATP synthase alpha chain [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036880|gb|EGI73341.1| ATP synthase alpha chain [Pseudoalteromonas haloplanktis ANT/505]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I +NL+   I  V +G   +++ G  V+  GR    P      GRV+N LG PIDG  +L
Sbjct: 62  IALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGPGLLGRVVNTLGAPIDGKGAL 121

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                  E + K+ P  + R+ V++  +TG + ID   P+  GQR  +      GK+ L 
Sbjct: 122 DND--GFEPVEKIAPGVIERKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   +G++   +   +   E++    L  ++VVVA++ ES  L+ +
Sbjct: 180 IDAIINQKDTGVKCVYVAIGQKASTIANVVRKLEEH--GALANTIVVVASASESAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APFAGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +   G + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNADYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE 402


>gi|122051527|gb|ABM65866.1| ATP synthase beta chain [Grammitis havilandii]
          Length = 410

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 62  LGRIFNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 119

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 120 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 179

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 180 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 239

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++     +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   + 
Sbjct: 240 VSALLDRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATT 297

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 298 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 356

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 357 QDIIAILG 364


>gi|159904111|ref|YP_001551455.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9211]
 gi|226739924|sp|A9BCD9|ATPA_PROM4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|159889287|gb|ABX09501.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9211]
          Length = 504

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE + +  G  V   G+    P      GRV+N LG+P+DG+  +
Sbjct: 63  IALNLEDDNVGAVLMGEALGVQEGSTVKSTGKIASVPVGQAMLGRVVNPLGQPVDGNGDI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-L 178
              D S  I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ + +
Sbjct: 123 ATSD-SRLIESLAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAI 181

Query: 179 SMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
                    D V + + VG++   V + +E       L+ ++VV A++ E+  L+ +AP 
Sbjct: 182 DTIINQKGQDVVCVYVAVGQKSASVAQVVEVLREKGALEYTIVVNASASEAAALQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAAIAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +    G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKLSESMGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A +   KK+  +L   + +F+E
Sbjct: 362 ISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|156739678|gb|ABU93492.1| ATP synthase beta subunit [Sorolepidium glaciale]
          Length = 394

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 148/307 (48%), Gaps = 24/307 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 210 AGSEVSALPGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 268 PATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 326

Query: 383 FEETRDI 389
           ++E +DI
Sbjct: 327 YKELQDI 333


>gi|171122|gb|AAA66890.1| vacuolar H+-ATPase 52 kDa subunit [Saccharomyces cerevisiae]
          Length = 515

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I  D  IV +     G ++    + F     RI  S    GR+ +  G+PID   
Sbjct: 65  GQVLEIRGDRAIVQLFEGTSGIDVKKTTVEFTGESLRIPVSEDMLGRIFDGSGRPIDNGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TG+  ID    +  GQ+I +F+ SG+  + +
Sbjct: 125 KVFAEDY-LDINGSPINPYARIYPEEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEI 183

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 184 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 243

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 244 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 303

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 304 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ 363

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 364 LHNKGIYPPINVLPSLSRLMKSA 386


>gi|238759556|ref|ZP_04620718.1| hypothetical protein yaldo0001_33870 [Yersinia aldovae ATCC 35236]
 gi|238793100|ref|ZP_04636728.1| hypothetical protein yinte0001_37370 [Yersinia intermedia ATCC
           29909]
 gi|238702215|gb|EEP94770.1| hypothetical protein yaldo0001_33870 [Yersinia aldovae ATCC 35236]
 gi|238727473|gb|EEQ18999.1| hypothetical protein yinte0001_37370 [Yersinia intermedia ATCC
           29909]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|328769994|gb|EGF80037.1| hypothetical protein BATDEDRAFT_16944 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 545

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 159/344 (46%), Gaps = 23/344 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           GQ + +  D V I   G    I  GD+V   G     P      GRV++ALG PIDG   
Sbjct: 97  GQALNLEADNVGIVVFGNDRLIKEGDIVKRTGSIVDVPVGMGLLGRVVDALGNPIDG--- 153

Query: 119 LGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KG L       +  K P  + RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 154 --KGPLQDVKRQRVQVKAPGIIPRQSVNEPMQTGIKCIDSMVPIGRGQRELIIGDRQTGK 211

Query: 175 S-----TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYL-GDNLKKSVVVVAT 223
           +     T+L+    +   DK      +   VG++   V +F++     D L+ S+VV AT
Sbjct: 212 TAVALDTILNQKRWNSSEDKSKRLYCVYVAVGQKRSTVAQFVQTLEENDALQYSIVVAAT 271

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++  L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    YP
Sbjct: 272 ASDAAPLQFLAPYSGAAMGEHFRDNGMHSLIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 331

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     K    G++TA+  +   G + +  I  +V SI DG I L   
Sbjct: 332 GDVFYLHSRLLERAAKMNKTFGGGSMTALPVIETQGGDVSAYIPTNVISITDGQIFLEAE 391

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E
Sbjct: 392 LFFKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE 435


>gi|291165817|gb|EFE27865.1| ATP synthase F1, alpha subunit [Filifactor alocis ATCC 35896]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 158/337 (46%), Gaps = 9/337 (2%)

Query: 65  INLDIVYICPVGIGEE--ISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK 121
           +NL+   +  V +G +  I  GD V   G     P      GRV+NALG+PIDG   +  
Sbjct: 64  LNLEESSVGAVMLGSDKGIKEGDAVKTTGNVVQVPVGEQLLGRVVNALGQPIDGKGPILT 123

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSM 180
            +  M I  K    + R++V +  +TGI+ ID   P+  GQR  +      GK+T+ +  
Sbjct: 124 KEY-MPIERKAAGIIEREKVSEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIAIDT 182

Query: 181 FARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
                  D + + + +G++   V + +E       L  ++VV AT+ E   L+ +AP + 
Sbjct: 183 ILNQKGKDVICVYVAIGQKLSTVVQIVETLEKQGALDYTIVVAATASELAPLQYIAPYSG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            T+ EYF  +G +VL + D +++ A + R ++      P    YP  VF    RLLER  
Sbjct: 243 CTMGEYFMDRGKHVLCVYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
              KEK  G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P  S
Sbjct: 303 KLSKEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIRPAVNPGIS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           VSR+   A     KK+  +L     ++ E +     G
Sbjct: 363 VSRVGGNAQLKPMKKVSGTLRLDYSQYRELQAFSQFG 399


>gi|224179485|ref|YP_002601009.1| CF1 alpha subunit of ATP synthase [Monomastix sp. OKE-1]
 gi|217314528|gb|ACK36871.1| CF1 alpha subunit of ATP synthase [Monomastix sp. OKE-1]
          Length = 507

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G +I  GD V   G+  +I     + GRV++AL +PIDG 
Sbjct: 60  TVGIALNLETDNVGAVLMGDGLKIQEGDSVKATGKIAQIPVGEAFLGRVVDALARPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            ++ K D +  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GAI-KADATRLIESPAPGIISRRSVYEPLQTGLVAIDAMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +   + V+   V  G++   V + +         K  ++VA + ++P  L+ +
Sbjct: 179 VATDTILNQNGENVVCVYVAIGQKASSVAQIVTTLQERGAMKYTIIVAENADAPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF   G + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYTGRHTLVIYDDLSKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER         +G++TA+  +   G + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSNALGEGSMTALPVIETQGGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++  +L   + +F E
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGTLKLELAQFAE 392


>gi|149384519|gb|ABR25082.1| ATP synthase beta chain [Dryopteris marginalis]
          Length = 421

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 164/336 (48%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 40  GRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 97  GGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 156

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +  E
Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 217 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   V  R LA +G YP VDPL S S ++ + W   E+       +   + R++E 
Sbjct: 275 SAHLDATTVPPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRYKEL 333

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 334 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|198284881|ref|YP_002221202.1| F0F1 ATP synthase subunit alpha [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665445|ref|YP_002427561.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226739835|sp|B7JB86|ATPA_ACIF2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739836|sp|B5ER44|ATPA_ACIF5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|198249402|gb|ACH84995.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517658|gb|ACK78244.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 514

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 178/379 (46%), Gaps = 29/379 (7%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE   L  GD+V   GR    P      GRV+NALG+P+DG  ++
Sbjct: 63  LAMNLEQDNVGAVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPVDGKGAI 122

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              +   +++ K+ P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 123 DAEEF--DVLEKIAPGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVA 180

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  +     + I   +G++   V   +   E+Y    ++ + V+ A + ES  ++ +
Sbjct: 181 VDAILNQKGKDVQCIYVAIGQKASTVAGVVRKLEEY--GAMEYTTVIAANASESAAMQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  +G N L++ D +T+ A + R+I+      P    YP  VF    RL
Sbjct: 239 APYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 299 LERAARVNADFVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLET 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A +   KKL   +   + ++   R++     +   +D
Sbjct: 359 DLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGIRLDLAQY---RELAAFAQFASDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQ 419
            I  K + +   + + LKQ
Sbjct: 416 EITRKQIERGKRVTELLKQ 434


>gi|55056914|emb|CAF21958.1| ATP synthase beta subunit [Cycas taiwaniana]
          Length = 442

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 154/313 (49%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 73  GATLGRIFNVIGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 129

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 130 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 188

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+A       + +VLL +D+I RF 
Sbjct: 189 GVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMAXXXXXXXEQDVLLFIDNIFRFV 248

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 249 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 306

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + 
Sbjct: 307 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 365

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 366 RYKELQDIIAILG 378


>gi|149384773|gb|ABR25195.1| ATP synthase beta chain [Phegopteris hexagonoptera]
          Length = 426

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V   +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPPFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD    L+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTALSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|329735642|gb|EGG71925.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU028]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P    EEIS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---EEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|319399589|gb|EFV87844.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis FRI909]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P    EEIS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---EEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|156739784|gb|ABU93545.1| ATP synthase beta subunit [Diacalpe aspidioides]
          Length = 394

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|169261007|gb|ACA52103.1| ATP synthase beta subunit [Salvinia sp. HR1023]
          Length = 288

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 145/273 (53%), Gaps = 19/273 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   ++G  + S +  + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NMGPVNSSTKFPIHRDAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
            +N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + LD   VL+R  A +G YP VDPL S S +
Sbjct: 242 TFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTM 274


>gi|268593516|ref|ZP_06127737.1| ATP synthase F1, alpha subunit [Providencia rettgeri DSM 1131]
 gi|291310939|gb|EFE51392.1| ATP synthase F1, alpha subunit [Providencia rettgeri DSM 1131]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGPVDNDGFSPVEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  V      GK+ L   ++  + D   K +   +G++   V   +   E++    L+ 
Sbjct: 163 QRELVIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVSNVVRKLEEH--GALQN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERAARVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|242241511|ref|ZP_04795956.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis W23144]
 gi|242235054|gb|EES37365.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis W23144]
          Length = 503

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P    EEIS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---EEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|156739728|gb|ABU93517.1| ATP synthase beta subunit [Arachniodes cavaleriei]
          Length = 394

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 150/309 (48%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 37  GRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 93

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +  
Sbjct: 94  GGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 152

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|728921|sp|P41167|ATPA_THIFE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|154672|gb|AAA53125.1| F1F0-ATPase alpha subunit [Acidithiobacillus ferrooxidans]
          Length = 514

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 32/390 (8%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE   L  GD+V   GR    P      GRV+NALG+P+DG  ++
Sbjct: 63  LAMNLEQDNVGAVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPVDGKGAI 122

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              +   +++ K+ P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 123 DAEEF--DVLEKIAPGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVA 180

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  +     + I   +G++   V   +   E+Y    ++ + V+ A + ES  ++ +
Sbjct: 181 VDAILNQKGKDVQCIYVAIGQKASTVAGVVRKLEEY--GAMEYTTVIAANASESAAMQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  +G N L++ D +T+ A + R I+      P    YP  VF    RL
Sbjct: 239 APYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRHISLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 299 LERAARVNADFVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLET 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A +   KKL   +   + ++   R++     +   +D
Sbjct: 359 DLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGIRLDLAQY---RELAAFAQFASDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQ---SPSDLSSE 427
            I  K + +   + + LKQ   SP  ++ E
Sbjct: 416 EITRKQIERGKRVTELLKQDQFSPMSVADE 445


>gi|156739696|gb|ABU93501.1| ATP synthase beta subunit [Polystichum makinoi]
          Length = 394

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 22/306 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 151 INEQNISESKVASVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPPAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDI 389
           +E +DI
Sbjct: 328 KELQDI 333


>gi|163751420|ref|ZP_02158645.1| ATP synthase subunit A [Shewanella benthica KT99]
 gi|161328723|gb|EDP99871.1| ATP synthase subunit A [Shewanella benthica KT99]
          Length = 513

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  + +G   +L  GD V   GR    P      GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAIVMGPFATLAEGDKVRTTGRILEVPVGRGLLGRVVNTLGEPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + RQ V +  +TG + +D   P+  GQR  +     IGK+ L 
Sbjct: 122 DNDGYSPVEVIA--PGVIERQSVSQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   +G++   V   +   E++    L+ ++VVVAT+ E+  L  +
Sbjct: 180 IDAIINQKDTGIKCVYVAIGQKASTVANVVRKLEEH--GALENTIVVVATASEAAALLYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYAGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 298 LERAARVNIKYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE 402


>gi|29726144|gb|AAD00598.2| ATP synthase beta subunit [Hunnemannia fumariifolia]
          Length = 486

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 151/310 (48%), Gaps = 20/310 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P
Sbjct: 93  ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R    LTA  +AEYF    + +VLL +D+I RF  +
Sbjct: 210 INEQNIAESKVALVYGQMNEPPGARMRVGLTAXXMAEYFRDVNEQDVLLFIDNIFRFVQA 269

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 270 GSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384
            +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++
Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVXQTSQRYK 387

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 388 ELQDIIAILG 397


>gi|14717922|gb|AAK72704.1| ATP synthase beta subunit [Acharia tragodes]
          Length = 384

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 157/339 (46%), Gaps = 28/339 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 42  KGRDTIGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 102 IFNVLGEPVD---DLGPVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158

Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREV-REFIEDYL--GDN 213
           +IG+F G+G+GK+ L+         A                G ++  E  E  +   +N
Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGXXXXXXXXXXXXXGNDLYMEMKESGVINEEN 218

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
            LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEE 375


>gi|326792681|ref|YP_004310502.1| ATP synthase F1 subunit alpha [Clostridium lentocellum DSM 5427]
 gi|326543445|gb|ADZ85304.1| ATP synthase F1, alpha subunit [Clostridium lentocellum DSM 5427]
          Length = 503

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 27/384 (7%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  D + +  +G  + I  GD V   GR    P      GRV+NALG+PIDG   
Sbjct: 61  GMVQNLEEDNIGVVLLGSDQNIKEGDTVKSTGRVVEVPVGDALSGRVVNALGQPIDG--- 117

Query: 119 LGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KG ++ +    V       ++R+ V+   +TG++ ID   P+  GQR  +      GK
Sbjct: 118 --KGPINTDKFRPVERVASGVIDRKSVDTPLQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 S-----TLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
           +     T+++   + DC    I   +G++   V + +      D +  + +VVAT+ E+ 
Sbjct: 176 TAIAIDTIINQKGK-DCL--CIYVAIGQKASTVAQLVNALEKADAMSYTTIVVATASEAA 232

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP   VT+ E +  +G +VL++ D +++ A + R ++      P    YP  VF 
Sbjct: 233 PLQYLAPYAGVTMGEEWMEQGKDVLIVYDDLSKHAVAYRTMSLLLHRPPGREAYPGDVFY 292

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G
Sbjct: 293 LHSRLLERAARLSDELGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLETELFNAG 352

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+P  SVSR+   A     K++   +   + ++   R +     +   +D     A
Sbjct: 353 VRPAVNPGLSVSRVGGAAQIKAMKQVAGPIRTELAQY---RSLAAFAQFGSDLDTATKNA 409

Query: 407 VHQVPIIYDFLKQ---SPSDLSSE 427
           + Q   I + LKQ   SP ++S +
Sbjct: 410 LTQGERITEILKQPQYSPLEVSKQ 433


>gi|169261009|gb|ACA52104.1| ATP synthase beta subunit [Schizaea dichotoma]
          Length = 290

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 149/285 (52%), Gaps = 24/285 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S    + +  PA  +   +   F+TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVNSSATFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPHR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+   +K+S V
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMESTNNIAKAHGGVSVSGGVGERTREGNDLYM--EMKESKV 121

Query: 220 V----VATS---------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
           +    VA S         +E P  R     TA+T+AEYF      +V   +D+I RF  +
Sbjct: 122 INEQNVAESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPSFIDNIFRFVQA 181

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 182 GSEVSASPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 239

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 240 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283


>gi|328681631|gb|AEB32888.1| ATP synthase beta subunit [Acromastigum stellare]
          Length = 380

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 22/301 (7%)

Query: 110 GKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVF 167
           G P+D   +LG  D S    + +  PA  +   +   F+TGI+V+D+  P   G +IG+F
Sbjct: 1   GXPVD---NLGPIDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLF 57

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSV 218
            G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S 
Sbjct: 58  GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESK 117

Query: 219 V--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
           V  V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++   G 
Sbjct: 118 VASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLSFIDNIFRFVQAGSEVSALLGR 177

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 178 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 235

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 236 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIL 294

Query: 394 G 394
           G
Sbjct: 295 G 295


>gi|294143108|ref|YP_003559086.1| ATP synthase F1 subunit alpha [Shewanella violacea DSS12]
 gi|293329577|dbj|BAJ04308.1| ATP synthase F1, alpha subunit [Shewanella violacea DSS12]
          Length = 513

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 165/345 (47%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   +L  GD V   GR    P      GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAVVMGPYATLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + R+ V +  +TG + +D   P+  GQR  +     IGK+ L 
Sbjct: 122 DNDGFSPVEVIA--PGVIERKSVSQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + +   K +   VG++   V   +   E++    L  ++VVVAT+ E+  L+ +
Sbjct: 180 IDAIINQKNTGIKCVYVAVGQKASTVANVVRKLEEH--GALANTIVVVATASEAAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNVEYVEKFTKGKVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE 402


>gi|254413572|ref|ZP_05027342.1| ATP synthase F1, alpha subunit [Microcoleus chthonoplastes PCC
           7420]
 gi|196179679|gb|EDX74673.1| ATP synthase F1, alpha subunit [Microcoleus chthonoplastes PCC
           7420]
          Length = 505

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 9/335 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G +I  G  V   G+    P      GRV++AL +PIDG 
Sbjct: 60  TVGIALNLEEDNVGVVLMGEGLDIQEGSSVKATGKIAQVPVGEALIGRVVDALARPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +  G+ S  I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEIQSGE-SRLIESSAPGIIARRSVYEPLQTGITAIDAMIPVGRGQRELIIGDRQTGKTA 178

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRK 232
           +   ++  + +     +   VG++   V + + D L +   L  +V+V A + +   L+ 
Sbjct: 179 IAIDTILNQKEEDVICVYVAVGQKASTVVQVV-DALEERGALDYTVIVAANASDPATLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  +IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    R
Sbjct: 238 LAPYTGASIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 298 LLERAAKLNDDLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++P  SVSR+   A +   KK+   L   + +F++
Sbjct: 358 INPGISVSRVGSAAQTKAIKKVAGKLKLDLAQFDD 392


>gi|152990966|ref|YP_001356688.1| F0F1 ATP synthase subunit alpha [Nitratiruptor sp. SB155-2]
 gi|166201670|sp|A6Q4C2|ATPA_NITSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151422827|dbj|BAF70331.1| F0F1-type ATP synthase, alpha subunit [Nitratiruptor sp. SB155-2]
          Length = 505

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 173/373 (46%), Gaps = 12/373 (3%)

Query: 57  DNLGQVIRINLDI--VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           DN  + + +NL+   V +  +G GE I  G  V   G+   +P      GRVINA+G+PI
Sbjct: 58  DNGDKGMALNLEETNVGVVVLGRGEGIREGSSVKRLGQLLKAPVGEALVGRVINAIGEPI 117

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   +    +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      G
Sbjct: 118 DGKGPIEATEYRY-VEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTG 176

Query: 174 KSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           K+T+ +         D V I + VG++   V + ++       +  ++VV A + E   L
Sbjct: 177 KTTVAIDTIINQKGQDVVCIYVAVGQKQSTVAQVVKKLEEHGAMDYTIVVNAGASEPAAL 236

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP T VTI EYF   G + L++ D +++ A + RE++      P    YP  VF   
Sbjct: 237 QFLAPYTGVTIGEYFRDNGKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLH 296

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 297 SRLLERAAKLNDKLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNAGIR 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A     K++  +L   + ++   R++     +   +D    K + 
Sbjct: 357 PAINVGISVSRVGGAAQIKAMKQVAGTLRLDLAQY---RELEAFAQFASDLDEASRKQLE 413

Query: 409 QVPIIYDFLKQSP 421
           +   + + LKQ P
Sbjct: 414 RGMRMVEILKQPP 426


>gi|124377031|emb|CAJ75681.1| ATP synthase beta chain [Cystodium sorbifolium]
          Length = 383

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 31/338 (9%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +G+ +  I    P           F+TGI+V D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVEGNATFPIHRSAPAFTQLDTKLSIFETGIKVADLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + 
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVT 122

Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
           +  N+ +S V  V   ++E P  R     TA T+AEYF      +V   +D+I RF  + 
Sbjct: 123 NEQNISESKVALVYGQTNEPPGARMRVGSTAPTMAEYFRDVNKQDVPSSIDNIFRFVQAG 182

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 183 SEVSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384
           +  +  D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++
Sbjct: 241 TTFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHHETAQGVKQTLQRYK 299

Query: 385 ETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 300 ELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 333


>gi|254572599|ref|XP_002493409.1| vacuolar ATP synthase subunit B [Pichia pastoris GS115]
 gi|238033207|emb|CAY71230.1| vacuolar ATP synthase subunit B [Pichia pastoris GS115]
          Length = 497

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQV--IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV  +R N  IV +     G ++    + F     +I  S    GRV +  G+PID   
Sbjct: 57  GQVLEVRGNRAIVQVFEGTSGIDVKKTRVEFTGDNLKIPVSEDMLGRVFDGSGRPIDNGP 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 117 KVFAEDF-LDINGSPINPYSRIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 175

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 176 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEENGSLERTSLFLN 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 236 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 296 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQISVDRQ 355

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L   G YPP++ L S+SRL   A
Sbjct: 356 LHNRGIYPPINVLPSLSRLMKSA 378


>gi|197303982|ref|ZP_03169014.1| hypothetical protein RUMLAC_02719 [Ruminococcus lactaris ATCC
           29176]
 gi|197296950|gb|EDY31518.1| hypothetical protein RUMLAC_02719 [Ruminococcus lactaris ATCC
           29176]
          Length = 461

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 176/368 (47%), Gaps = 37/368 (10%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102
           +FVV+  +    LG+++ +  D   I      E +SL +    L  H     +SP     
Sbjct: 31  EFVVNGEERK--LGRIVEVYEDKAVIQVFEGSENMSLKNTHTKLTGHPMEIALSPD--ML 86

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N +G+PID    LG    +L  ++       + R+       TGI  ID  T L  
Sbjct: 87  GRTFNGIGQPID---DLGPLVSNLKRDVNGLPLNPIRREYPRNYIHTGISAIDGLTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+G+G+    L +   +       SD    ++ + +G     V+  + D+  + 
Sbjct: 144 GQKLPIFSGNGLPHDQLAAQIVKQASLGDDSDEQFAIVFAAMG-----VKHDVADFFRNT 198

Query: 214 LKKSVVV------VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266
            ++S V       +  +++  + R + P  A+T+AEY +  +  ++L+IL  +T FA ++
Sbjct: 199 FEESGVADHVAMFLNLANDPVVERLITPKVALTVAEYLAFERHMHILVILTDMTSFAEAM 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++++ GE+P  +G+P  ++SEL  + ER G      G++T +  + +  D+   PI D
Sbjct: 259 REVSSSKGEIPSRKGFPGYLYSELATIYERAGIVRGVDGSVTQLPILTMPNDDITHPIPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIH 381
               I +G IVL+R L  +  YPP++ L S+SRL      A     D + L + L     
Sbjct: 319 LTGYITEGQIVLDRPLHGQSIYPPINILPSLSRLMKDGIGAGYTREDHQDLANQLFSAYA 378

Query: 382 RFEETRDI 389
           +  + R++
Sbjct: 379 KVGDARNL 386


>gi|149384841|gb|ABR25229.1| ATP synthase beta chain [Deparia petersenii]
          Length = 421

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 162/340 (47%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P            +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L    ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLTTESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +V L +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|156739772|gb|ABU93539.1| ATP synthase beta subunit [Acrorumohra hasseltii]
          Length = 394

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|227487991|ref|ZP_03918307.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227542633|ref|ZP_03972682.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092082|gb|EEI27394.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181831|gb|EEI62803.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 549

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 185/388 (47%), Gaps = 25/388 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG-D 116
           +G    ++ D + +  +G  E +  GD V   G    I     + GRVIN LG+PID   
Sbjct: 63  IGVAQNLDTDSIGVVILGDFEILKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDALG 122

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           D   + + ++E+  + P  + RQ VE+  +TG++ ID  TP+  GQR  +      GK+ 
Sbjct: 123 DIEAEENRALEL--QAPSVLQRQPVEEPLQTGMKAIDAMTPIGRGQRQLIIGDRKTGKTA 180

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGRE---VREFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G     VR  +E++    L+ + +V A 
Sbjct: 181 ICIDTILNQKANWESGDKTKQVRCIYVAIGQKGSTIAGVRRTLEEH--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP +   + +++  KG++VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPFSGAALGQHWMYKGNHVLIIYDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   KK+  +L   +  +   RD+     +   +D 
Sbjct: 359 LFNQGVRPAVNVGVSVSRVGGAAQTKGMKKVSGNLRLDLAAY---RDLEAFAAFASDLDA 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSD-LSSED 428
              K + +   + + LKQ  ++ ++ ED
Sbjct: 416 ASKKQLARGERLVELLKQKENNPMAVED 443


>gi|156739722|gb|ABU93514.1| ATP synthase beta subunit [Polystichum lepidocaulon]
          Length = 394

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+    +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVH---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 93  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 151

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 152 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 211

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 212 SEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 269

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W A E+       +   + R++
Sbjct: 270 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEEHYDTAQGVKQTLQRYK 328

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 329 ELQDIIAILG 338


>gi|29726128|gb|AAD00591.2| ATP synthase beta subunit [Corydalis nobilis]
          Length = 489

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 146/309 (47%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG P+     +        I    P  +        F+TGI+V+D+  P 
Sbjct: 95  GSTLGRIFNVLGXPVXNXGPVDT-RXXXPIHRSAPAFIELDTKLSIFETGIKVVDLLAPY 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 213

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  + 
Sbjct: 214 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAG 273

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G    A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   
Sbjct: 274 SEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 331

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S  L  +    +  +    +     R++E
Sbjct: 332 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGQEHYETAQRVKQTSQRYKE 391

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 392 LQDIIAILG 400


>gi|328681691|gb|AEB32918.1| ATP synthase beta subunit [Acromastigum anisostomum]
          Length = 366

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 34  FETGIKVVDLLAPYRRGGKNGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 93

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 94  GNDLYMEMKESKVINEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 153

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 154 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 211

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 212 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 270

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 271 ETAQGVKQTLQRYKELQDIIAILG 294


>gi|42558400|gb|AAS19909.1| ATP synthase beta chain [Terpsichore alsopteris]
          Length = 422

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSNAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E    R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPRGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|33327757|gb|AAQ09242.1| ATP synthase beta subunit [Pachysandra terminalis]
          Length = 495

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 149/309 (48%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N LG+P+D          S  I    P  +        F TGI+V+D+  P 
Sbjct: 101 GATLGRIFNVLGEPVDNLXXXXXXXXS-PIHRSAPAFIQLDTKLSIFXTGIKVVDLLAPY 159

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 160 RRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGVSVFGGVGXRTREGNDLYMEMXESGVI 219

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 220 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 279

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 280 SEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 337

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R L+ +G YP VDPL S S +       +E  +    +   + R++E
Sbjct: 338 TTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 397

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 398 LQDIIAILG 406


>gi|320580588|gb|EFW94810.1| Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia angusta DL-1]
          Length = 593

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 160/340 (47%), Gaps = 15/340 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +    V I   G   E+  G++V   G+    P      GRV++ALG PIDG   
Sbjct: 146 GMALNLEPGQVGIVLFGSDREVKEGEIVKRTGKIVDVPIGPGMLGRVVDALGNPIDGKGP 205

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           +     ++  + K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+   
Sbjct: 206 IEATGYAIAQL-KAPGILPRRSVFEPMQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVA 264

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
             T+L+    +D  D+      +   VG++   V + ++     D +K S+VV AT+ E+
Sbjct: 265 LDTILNQKRWNDGNDESKKLYCVYVAVGQKRSTVAQLVQTLEQNDAMKYSIVVAATASEA 324

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP TA  IAE+F   G + L++ D +++ A + R+++      P    YP  VF
Sbjct: 325 APLQYLAPFTACAIAEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVF 384

Query: 288 SELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER          G++TA+  +   G + +  I  +V SI DG I L   L  +
Sbjct: 385 YLHSRLLERAAKMSDAHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYK 444

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A     K++  SL   + ++ E
Sbjct: 445 GIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE 484


>gi|149384421|gb|ABR25033.1| ATP synthase beta chain [Asplenium ruta-muraria]
          Length = 426

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P           F+TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--V 373
             D+  DP   +  + LD   VL+R LA +G +P VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIHPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|328352579|emb|CCA38977.1| V-type H+-transporting ATPase subunit B [Pichia pastoris CBS 7435]
          Length = 504

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQV--IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV  +R N  IV +     G ++    + F     +I  S    GRV +  G+PID   
Sbjct: 64  GQVLEVRGNRAIVQVFEGTSGIDVKKTRVEFTGDNLKIPVSEDMLGRVFDGSGRPIDNGP 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 124 KVFAEDF-LDINGSPINPYSRIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 182

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 183 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEENGSLERTSLFLN 242

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 243 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 302

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 303 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQISVDRQ 362

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L   G YPP++ L S+SRL   A
Sbjct: 363 LHNRGIYPPINVLPSLSRLMKSA 385


>gi|149384487|gb|ABR25066.1| ATP synthase beta chain [Microlepia speluncae]
          Length = 382

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 149/300 (49%), Gaps = 18/300 (6%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    + + + +  I    P           F+TGI+V D+  P   G +IG+F 
Sbjct: 2   LGEPVDNPGPV-QSNTTFPIHRSAPAFTQLDTKLSIFETGIKVADLLAPYRRGGKIGLFG 60

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV 219
           G+G+GK+ L++    +       +S+ G  G   RE  + Y+           N+ +S V
Sbjct: 61  GAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKV 120

Query: 220 --VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
             V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 121 ALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNILRFVQAGSEVSALLGRM 180

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP   +  + LD   
Sbjct: 181 PSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAPATTSAHLDATT 238

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIGG 394
           VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++E +DI  I G
Sbjct: 239 VLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILG 297


>gi|332798519|ref|YP_004460018.1| V-type ATP synthase beta chain [Tepidanaerobacter sp. Re1]
 gi|332696254|gb|AEE90711.1| V-type ATP synthase beta chain [Tepidanaerobacter sp. Re1]
          Length = 457

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 14/322 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGD 116
           +G+V++I+ D V I        ISL D+   F      I  S    GR  N + +P DG 
Sbjct: 41  IGKVVQIDKDKVIIQVFQGISGISLSDVSVEFSGKPMEIPLSREILGRRFNGIAQPADGA 100

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   D    I  +    + R       +TGI  ID    L  GQ++ +F+G G+  + 
Sbjct: 101 GEI-YSDKYYNINGRPMNPVARLYPRNYIQTGISAIDGLMTLIRGQKLPIFSGDGLPHNQ 159

Query: 177 LLSMFAR--------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESP 228
           L +   R        S  F  V +++ G +  E   F + +    +   VV+     + P
Sbjct: 160 LAAQIVRQAKISDEESGNFAVVFVAM-GIKHDEANFFTKVFEEAGVMDRVVMFINLADDP 218

Query: 229 IL-RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           ++ R + P  A+T AEY +   + +VL+I+  +T +  ++REI++   E+P  +GYP  +
Sbjct: 219 VVERIITPRCALTAAEYLAFDCNMHVLVIMTDMTSYCEALREISSAREEVPSRKGYPGYL 278

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +S+L  L ER G  +  KG+IT +  + +  D+   P+ D    I +G IVL+RSL + G
Sbjct: 279 YSDLASLYERAGMLKSVKGSITQIPILTMPNDDITHPVPDLTGYITEGQIVLSRSLYQMG 338

Query: 347 RYPPVDPLASVSRLADKAWSAD 368
            YPP++ L S+SRL      A+
Sbjct: 339 IYPPINVLPSLSRLMKDGIGAE 360


>gi|282892281|ref|ZP_06300677.1| hypothetical protein pah_c221o011 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497872|gb|EFB40223.1| hypothetical protein pah_c221o011 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 504

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 11/336 (3%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            LG V+ + +D V    +G  + I   D+V    +    P      GRV+NALG+PIDG 
Sbjct: 59  TLGMVLNLAVDHVGAVLLGSEQGIKEHDVVKRTNKIISVPVGEALLGRVVNALGEPIDGK 118

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +        I ++ P  + RQ V +  +TG++ ID   P+  GQR  +      GK+T
Sbjct: 119 GKIETNHFR-PIEARAPNVVERQPVNEPIQTGVKAIDAMIPIGKGQRELIIGDRQTGKTT 177

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILR 231
           L+  ++  + D     I   +G++   + + +   E +  D +K + ++ A + +   L+
Sbjct: 178 LILDTIINQKDKDVACIYVAIGQKNSTIAKMVAILEKH--DAMKYTTIIAAPASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V + EYF   G + +   D +T+ A + R++A      P    YP  +F    
Sbjct: 236 YIAPYAGVNMGEYFMYNGKHAICFYDDLTKHAQAYRQMALLLKRPPGREAYPGDIFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  V    ++    I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSAKLNDELGGGSLTGIPVVETQANDVATYIPTNVISITDGQIYLESDLFYAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   S SR+  KA +   KK+  SL   + ++ E
Sbjct: 356 AINVGISASRVGGKAQTKAMKKVAGSLRLDLAQYRE 391


>gi|62390098|ref|YP_225500.1| F0F1 ATP synthase subunit alpha [Corynebacterium glutamicum ATCC
           13032]
 gi|161486713|ref|NP_600435.2| F0F1 ATP synthase subunit alpha [Corynebacterium glutamicum ATCC
           13032]
 gi|81704079|sp|Q79VG7|ATPA_CORGL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|9757619|dbj|BAB08155.1| H+-ATPase alpha subunit [Corynebacterium glutamicum]
 gi|21323977|dbj|BAB98603.1| F0F1-type ATP synthase alpha subunit [Corynebacterium glutamicum
           ATCC 13032]
 gi|41325434|emb|CAF19914.1| PROBABLE ATP SYNTHASE ALPHA CHAIN PROTEIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 547

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 168/359 (46%), Gaps = 24/359 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 63  IGVAQNLEADRVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEAFLGRVINPLGQPIDGLG 122

Query: 118 SLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
            +  + D  +E+  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 123 EIASEEDRVLEL--QAPTVLERQPVEEPLATGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 180

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGREV---REFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G  +   R+ +E+     L+ + +V A 
Sbjct: 181 VCVDTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQ--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDAAGFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G+ITA+  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLSDELGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           L   G  P ++   SVSR+   A +   KK+  SL   +  F   RD+     +   +D
Sbjct: 359 LFNRGVRPAINVGVSVSRVGGAAQTKGMKKVAGSLRLDLAAF---RDLEAFATFASDLD 414


>gi|149384837|gb|ABR25227.1| ATP synthase beta chain [Deparia bonincola]
          Length = 424

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 162/340 (47%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P            +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L    ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLTTESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   V +R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|119944246|ref|YP_941926.1| F0F1 ATP synthase subunit alpha [Psychromonas ingrahamii 37]
 gi|190358146|sp|A1SS62|ATPA1_PSYIN RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|119862850|gb|ABM02327.1| ATP synthase F1, alpha subunit [Psychromonas ingrahamii 37]
          Length = 519

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 160/337 (47%), Gaps = 7/337 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           + D  G    ++ D + +  +G   ++  GD V   GR   ++      GRVI+ LG+P+
Sbjct: 59  SGDIYGIAFNVDQDSIGVVLLGDYWQLQSGDEVERTGRVMDVAVGLGLLGRVIDPLGRPL 118

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    +   +  + +     P M+R  V    +TG++VID   P+  GQR  +      G
Sbjct: 119 DDKGPIESSE-RLPVERPAAPIMDRAPVTVPLQTGLKVIDALIPIGRGQRELILGDRQTG 177

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           K+T+   ++  + D     +   +G+R   V + I        L  ++V+V+  +  P  
Sbjct: 178 KTTIAIDTILNQHDQNVLCVYCAIGQRASAVAKTIAILKAKGALDYTLVMVSEGNAPPGF 237

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP  A +IAEYF  KG +VL++ D +T+ A + RE++      P    +P  +F   
Sbjct: 238 AYIAPYAATSIAEYFMEKGRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIH 297

Query: 291 PRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER        + G++TA+  +  +  N +  I  ++ SI DG I L+ +L E G  
Sbjct: 298 SRLLERATCLKQRHKGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPTLFELGIL 357

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P VD   SVSR+  KA     + + ++L     +FEE
Sbjct: 358 PAVDVGRSVSRVGGKAQRPMYRAVAANLKLTYAQFEE 394


>gi|28211922|ref|NP_782866.1| V-type ATP synthase subunit B [Clostridium tetani E88]
 gi|75541771|sp|Q891P2|VATB2_CLOTE RecName: Full=V-type ATP synthase beta chain 2; AltName:
           Full=V-ATPase subunit B 2
 gi|28204365|gb|AAO36803.1| V-type sodium ATP synthase subunit B [Clostridium tetani E88]
          Length = 460

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 162/316 (51%), Gaps = 19/316 (6%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           G+V+++  D  ++ +     G  +    + F      IS S    GR  N +G+ IDG  
Sbjct: 42  GRVVQLQGDKAVIQVFESTTGMSLQNTTISFTGKPLEISLSREVLGREFNGIGEAIDGRG 101

Query: 118 ---SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
              SL K +++   ++ V     R  ++    TGI  ID  T L  GQ++ +F+G+G+  
Sbjct: 102 EIYSLKKYNVNGRPINPVARKYPRNFIQ----TGISSIDCLTTLIRGQKLPIFSGNGMPH 157

Query: 175 STLLSMFARS------DCFDK--VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDE 226
           + L +   R       D  +K  V+ + +G +  +   F + +    +   +V+     +
Sbjct: 158 NELAAQIIRQAKIGGGDGEEKFAVVFAAMGIKHDDKEFFRKKFEEAGVIDRLVMFTNLAD 217

Query: 227 SPILRKMA-PLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            PI+ ++  P  A+T AEY +  +G ++L+I+  IT +  ++RE++++  E+P  +GYP 
Sbjct: 218 DPIVERITTPRAALTTAEYLAFEEGMHILVIMTDITNYCEALRELSSSREEVPSRKGYPG 277

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
            ++S+L  L ER G  E + G+IT +  + +  D+   PI D    I +G IVL+R L+ 
Sbjct: 278 YLYSDLASLYERAGMMEGKDGSITQLPILTMPNDDITHPIPDLTGYITEGQIVLSRDLSG 337

Query: 345 EGRYPPVDPLASVSRL 360
           +  YPPV+ L S+SRL
Sbjct: 338 KNIYPPVNILPSLSRL 353


>gi|149384755|gb|ABR25186.1| ATP synthase beta chain [Tectaria antioquoiana]
          Length = 385

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 22/304 (7%)

Query: 107 NALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 3   NVLGEPVD---NLGPVQSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 59

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           N+ 
Sbjct: 60  GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 119

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 120 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 179

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 180 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 237

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIR 390
           D   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI 
Sbjct: 238 DATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDII 296

Query: 391 LIGG 394
            I G
Sbjct: 297 AILG 300


>gi|11467065|ref|NP_042541.1| H(+)-transporting ATPase, subunit 1 [Acanthamoeba castellanii]
 gi|6647460|sp|Q37380|ATPAM_ACACA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|562046|gb|AAD11834.1| H(+)-transporting ATPase, subunit 1 [Acanthamoeba castellanii]
          Length = 522

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 157/356 (44%), Gaps = 32/356 (8%)

Query: 61  QVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           Q + +NL+   +  V  G+E  +  G+ V   G     P      GRV+NALG+PID   
Sbjct: 63  QGMALNLNSETVSAVLFGDETKIKPGEYVEGTGNIISVPVGMSLLGRVVNALGQPIDNKG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                +L  ++  K P  + RQ V +   TG++ ID   P+  GQR  V      GK+++
Sbjct: 123 DFPGSELK-QVEVKAPGIITRQSVNEPMITGVKAIDCLVPVGRGQRELVIGDRQTGKTSI 181

Query: 178 LSMFARSDCFDKV-----------------IISLVGERGREVREFIEDYLGDN-LKKSVV 219
                   C D V                 I + +G++   + + +      N L+ S++
Sbjct: 182 --------CLDAVLNQKYENSKNKKNALYCIYTAIGQKRSSISKLVTLLEKTNSLEYSII 233

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V AT+ E+  L+ +AP T   I EYF   G + L+I D +++ A + R+++      P  
Sbjct: 234 VAATASEAAPLQYLAPYTGCVIGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR 293

Query: 280 RGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  +F    RLLER     K    G++TA+  V     + +  I  +V SI DG I 
Sbjct: 294 EAYPGDIFYLHSRLLERAAKLNKNFGGGSLTALPVVETQAGDVSAYIPTNVISITDGQIF 353

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L  +L   G  P V+   SVSR+   A     KKL  SL   + ++ E       G
Sbjct: 354 LETNLFYNGIRPAVNVGLSVSRVGSAAQILAIKKLAGSLKLELAQYREALSFAQFG 409


>gi|2493128|sp|Q38680|VATB2_ACEAT RecName: Full=V-type proton ATPase subunit B 2; Short=V-ATPase
           subunit B 2; AltName: Full=Vacuolar proton pump subunit
           B 2
 gi|1303675|dbj|BAA09100.1| adenosine triphosphatase B subunit [Acetabularia acetabulum]
          Length = 492

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 25/289 (8%)

Query: 98  SACWCGRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           S    GRV N  GKPIDG  + L +  L ++  S  P    R   E+  +TG+  ID+  
Sbjct: 103 SKDMLGRVFNGSGKPIDGGPTVLAEAYLDIQGSSINPS--ERTYPEEMSQTGVSTIDVMN 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFI-------- 206
            +  GQ+I +F+ +G+  + + +   R       K   S++ + GRE  EF         
Sbjct: 161 SIARGQKIPLFSAAGLPHNDIAAQICRQAGLVRQKAQDSMI-DAGREEEEFAIVFAAMGV 219

Query: 207 ---------EDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
                    +D+  + +++K+V+ +  +++  I R + P  A+T AEY + + G +VL+I
Sbjct: 220 NMETAHYFKQDFEENGSMEKTVLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVI 279

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + +
Sbjct: 280 LTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTM 339

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPP++ L ++SRL   A
Sbjct: 340 PNDDITHPIPDLTGYITEGQIYVDRQLHNIQIYPPINVLPTLSRLMKSA 388


>gi|149384715|gb|ABR25166.1| ATP synthase beta chain [Phlebodium decumanum]
          Length = 385

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 24/305 (7%)

Query: 107 NALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P   G +I
Sbjct: 3   NVLGEPVD---NLGPVRSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 59

Query: 165 GVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL------ 214
           G+F G+G+GK+      ++  A++     V   +  ER RE  +   +     +      
Sbjct: 60  GLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNI 118

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++ 
Sbjct: 119 SESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSA 178

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 179 LLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAH 236

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDI 389
           LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI
Sbjct: 237 LDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDI 295

Query: 390 RLIGG 394
             I G
Sbjct: 296 IAILG 300


>gi|255716834|ref|XP_002554698.1| KLTH0F11506p [Lachancea thermotolerans]
 gi|238936081|emb|CAR24261.1| KLTH0F11506p [Lachancea thermotolerans]
          Length = 511

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  IV +     G ++    + F     RI  S    GR+ +  G+PID   
Sbjct: 64  GQVLEVRGDRAIVQVFEGTSGIDVKKTTVEFTGENLRIPVSEDTLGRIFDGSGRPIDNGP 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TG+  ID    +  GQ+I +F+ SG+  + +
Sbjct: 124 KVFAEDY-LDINGSPINPYARIYPEEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEI 182

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 183 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 242

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 243 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 302

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 303 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQISVDRQ 362

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 363 LYNKGVYPPINVLPSLSRLMKSA 385


>gi|45187493|ref|NP_983716.1| ADL380Wp [Ashbya gossypii ATCC 10895]
 gi|44982231|gb|AAS51540.1| ADL380Wp [Ashbya gossypii ATCC 10895]
          Length = 516

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 157/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  IV +     G ++    + F     +I  S    GR+ +  G+PID   
Sbjct: 64  GQVLEVRGDRAIVQVFEGTSGIDVKKTTVEFTGQSLKIPVSDDTLGRIFDGSGRPIDNGP 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 124 KVFAEDY-VDINGSAINPYARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 182

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 183 AAQICRQAGLVRPTKDVHDGHEDNFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 242

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 243 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 302

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 303 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ 362

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L+ +G YPP++ L S+SRL   A
Sbjct: 363 LSNKGIYPPINVLPSLSRLMKSA 385


>gi|14718218|gb|AAK72847.1| ATP synthase beta subunit [Securidaca diversifolia]
          Length = 279

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 21/276 (7%)

Query: 109 LGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +        
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQNIAE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
              VL+R LA +G YP VDPL S S +       DE
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDE 271


>gi|149384857|gb|ABR25237.1| ATP synthase beta chain [Diplazium plantaginifolium]
          Length = 426

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNALGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYL--- 210
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
                N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  
Sbjct: 153 VINEQNISESKVAPVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLSIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   V  R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVPPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|114330302|ref|YP_746524.1| F0F1 ATP synthase subunit alpha [Nitrosomonas eutropha C91]
 gi|122314652|sp|Q0AJB2|ATPA1_NITEC RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|114307316|gb|ABI58559.1| ATP synthase F1 subcomplex alpha subunit [Nitrosomonas eutropha
           C91]
          Length = 513

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 201/444 (45%), Gaps = 34/444 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L V       G I S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSKIEGLSVTSEFRTQGTIVSLTDGIVRVHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E ++ GD+V   GR   +       GRV+NALG+PID
Sbjct: 58  -GTYGLALNLERDSVGAVILGAYEHLTEGDIVKCTGRVLEVPVGEALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           G   +      ME + K+ P  ++R+ V++  +TG++ +D   P+  GQR  +      G
Sbjct: 117 GKGPVAA--QGMEPIEKIAPGVISRKSVDQPMQTGLKSVDSMVPIGRGQRELIIGDRQTG 174

Query: 174 KSTL-LSMFARSDCFDKVIISL-VGERGREVREFIE--DYLGDNLKKSVVVVATSDESPI 229
           K+ + +         D + I + +G++   +   +   + +G  +  ++VVVA++ ES  
Sbjct: 175 KTAVAIDAIINQKGEDMICIYVAIGQKASSIANVVRKLEEVG-AMAYTIVVVASASESAA 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ +AP +  T+ EYF  KG + L++ D +T+ A + R+I+      P    YP  VF  
Sbjct: 234 MQYIAPYSGCTMGEYFRDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G  + + G++TA+  +     +    +  +V SI DG I
Sbjct: 294 HSRLLERAARVNADYVEKATGGKVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQI 353

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L   L   G  P ++   SVSR+   A +   KKL   +   + ++   R++     + 
Sbjct: 354 FLESDLFNAGIRPAINAGVSVSRVGGAAQTKVIKKLGGGIRLALAQY---RELAAFAQFA 410

Query: 397 PGVDLILDKAVHQVPIIYDFLKQS 420
             +D    K + +  +  + +KQ+
Sbjct: 411 SDLDEATRKQLERGKMATELMKQA 434


>gi|30961792|gb|AAP40010.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 366

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 15  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 74

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 75  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIIN 133

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVVV A++ +S  ++ +AP   V
Sbjct: 134 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVVNASASDSAAMQYLAPYAGV 191

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 192 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 251

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 252 VCDEKGAGSLTALPVVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 311

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 312 SRVGGAAQIKATKQVSGTLRLDLAQYRE 339


>gi|227874290|ref|ZP_03992478.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227839864|gb|EEJ50306.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 506

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 155/336 (46%), Gaps = 9/336 (2%)

Query: 66  NLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122
           NL+   +  V  G ++ +  G  V   GR    P      GRV+NA+G+PIDG   +   
Sbjct: 65  NLEETSVSAVLFGSDVGIREGQSVKRTGRVVSVPVGEQLIGRVVNAIGQPIDGIGPIEST 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
           +    + S  P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+T+ +   
Sbjct: 125 EFRA-VESPAPGIIKRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTIAIDTI 183

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAV 239
                 D + I + +G++   V   + +      +  S+VV AT+ E   L+ +AP    
Sbjct: 184 INQKGKDVICIYVAIGQKRSTVTALVNELKEAGAMDYSIVVAATASEPSPLQYIAPYAEC 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF ++G +VL+I D +++ A + R I+      P    YP  VF    RLLER   
Sbjct: 244 AMGEYFMNQGKHVLIIYDDLSKHAVAYRAISLLIRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P  SV
Sbjct: 304 LSPELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMPAVNPGISV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           SR+   A     KK+  +L  +  ++ E +     G
Sbjct: 364 SRVGGNAQIKAMKKVAGTLKLVYSQYRELQSFAQFG 399


>gi|156739726|gb|ABU93516.1| ATP synthase beta subunit [Arachniodes caudata]
          Length = 394

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 24/310 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214
            G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     + 
Sbjct: 93  RGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 151

Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266
                   K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  + 
Sbjct: 152 NEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 211

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 212 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 269

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384
           +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R++
Sbjct: 270 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQRYK 328

Query: 385 ETRDIRLIGG 394
           E +DI  I G
Sbjct: 329 ELQDIIAILG 338


>gi|25808435|gb|AAN74344.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDVAQYRE 337


>gi|1660995|dbj|BAA13613.1| defective F1F0-ATPase alpha subunit precursor [Saccharomyces
           cerevisiae]
          Length = 545

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 122 GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 177

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 178 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 237

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 238 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 297

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 298 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 357

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI+DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 358 LTALPVIETQGGDVSAYIPTNVISIIDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 417

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 418 KALKQVAGSLKLFLAQYRE 436


>gi|262199223|ref|YP_003270432.1| ATP synthase F1 subunit alpha [Haliangium ochraceum DSM 14365]
 gi|262082570|gb|ACY18539.1| ATP synthase F1, alpha subunit [Haliangium ochraceum DSM 14365]
          Length = 512

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 178/390 (45%), Gaps = 28/390 (7%)

Query: 13  EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIV 70
           +DY K + V + G + +       +  LS  V  G+ V   G   + + G V+ +  D V
Sbjct: 17  QDYEKRVEVTETGTVLTAGDGIARIYGLSG-VMAGEMVELSGTGGETVQGMVLNLEEDNV 75

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            +  +G  E I  GD     GR    P      GRV+NA+G+PIDG   +   +   ++ 
Sbjct: 76  GVALLGKFESIKEGDTARRTGRIVEVPVGDELLGRVVNAIGEPIDGGPPIATKE-RRKVE 134

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARS 184
            K P  M R+ V +  +TGI+ ID   P+  GQR  +    G+GK+     T+++   ++
Sbjct: 135 LKAPGIMARKSVHEPMQTGIKAIDSMIPIGRGQRELIIGDRGVGKTAVALDTIINQKGQN 194

Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLT 237
             CF   I    G++   V   +     D LKK      + VVVA + E   L+ +AP T
Sbjct: 195 VYCFYVAI----GQKQSTVASLV-----DKLKKAGAFEYTTVVVAGAAEPAPLQFIAPYT 245

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            V +AE++   G + L++ D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 246 GVAMAEHYRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYIHSRLLERA 305

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   
Sbjct: 306 AKVNDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEGDLFYSGIRPAVNVGL 365

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SVSR+   A +   KK+   L   +  F E
Sbjct: 366 SVSRVGGSAQTKAMKKVAGRLRLELASFRE 395


>gi|20467351|gb|AAL27806.1| ATPase beta subunit [Encephalartos villosus]
          Length = 444

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 169/367 (46%), Gaps = 33/367 (8%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 21  KGQDMAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 80

Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G 
Sbjct: 81  IFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 137

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +    
Sbjct: 138 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESGVINEQ 196

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R     TA+T+ EYF       VLL +D+I RF  +  ++
Sbjct: 197 DISGSKVALVYGQMNEPPXARMRVGXTALTMXEYFRXVXXQXVLLFIDNIFRFVQAGSKV 256

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +     +P   GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 257 SALLXXMPSXVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 314

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +
Sbjct: 315 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 373

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 374 DIIAILG 380


>gi|25808449|gb|AAN74351.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 7   EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 66

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 67  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 125

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 126 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 183

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 184 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 243

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 244 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 303

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 304 SRVGGAAQIKATKQVSGTLRLDLAQYRE 331


>gi|169261011|gb|ACA52105.1| ATP synthase beta subunit [Thelypteris reticulata]
          Length = 290

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 143/283 (50%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283


>gi|25808441|gb|AAN74347.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 336

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 7   EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 66

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 67  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 125

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 126 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 183

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 184 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 243

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 244 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 303

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 304 SRVGGAAQIKATKQVSGTLRLDLAQYRE 331


>gi|295400690|ref|ZP_06810667.1| ATP synthase F1, alpha subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112620|ref|YP_003990936.1| ATP synthase F1 subunit alpha [Geobacillus sp. Y4.1MC1]
 gi|294977271|gb|EFG52872.1| ATP synthase F1, alpha subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217721|gb|ADP76325.1| ATP synthase F1, alpha subunit [Geobacillus sp. Y4.1MC1]
          Length = 502

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 150/318 (47%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ IV + P  GI E    GD V   GR    P      GRV+N LG+P+DG   +   +
Sbjct: 70  NVGIVILGPYTGIKE----GDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPIETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESRAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRSVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGAAQIKAMKKVSGTL 382


>gi|126305084|ref|XP_001365990.1| PREDICTED: similar to ATPase, H+ transporting, lysosomal V1 subunit
           B1 [Monodelphis domestica]
          Length = 537

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 168/364 (46%), Gaps = 21/364 (5%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN--LDIVYICPVG 76
           L + GG+     S   T T ++QY  + +F +  G +    GQV+ ++    +V +    
Sbjct: 50  LSLGGGWKLQTGSGLPTDTSVAQYAEIVNFTLPNGTHRS--GQVLEVSGTKAVVQVFEGT 107

Query: 77  IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            G +       F     R   S    GRV N  GKPID    +   D  ++I  +     
Sbjct: 108 SGIDAQKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPKVMAEDF-LDINGQPINPH 166

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--------DCFD 188
           NR   E+  +TGI  ID+   +  GQ+I +F+ +G+  + + +   R         D  D
Sbjct: 167 NRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVD 226

Query: 189 ------KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTI 241
                  ++ + +G      R F  D+  +   ++V +       P I R + P  A+T 
Sbjct: 227 YHEDNFAIVFAAMGVNMETARFFKSDFEQNGTMENVCLFLNLANDPTIERIITPRLALTT 286

Query: 242 AEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AE+ + + + +VL+IL  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  
Sbjct: 287 AEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRV 346

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+IT +  + +  D+   PI D    I +G I ++R L     YPP++ L S+SRL
Sbjct: 347 EGRAGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRHLHNRQIYPPINVLPSLSRL 406

Query: 361 ADKA 364
              A
Sbjct: 407 MKSA 410


>gi|149188273|ref|ZP_01866567.1| F0F1 ATP synthase subunit alpha [Vibrio shilonii AK1]
 gi|148837862|gb|EDL54805.1| F0F1 ATP synthase subunit alpha [Vibrio shilonii AK1]
          Length = 512

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 147/308 (47%), Gaps = 29/308 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIF 155
              GRV+N LG+PIDG     KG++  E    V    P  ++R+ V++  +TG + +D  
Sbjct: 102 ALLGRVVNTLGQPIDG-----KGEVKAERFDPVEVIAPGVIDRKSVDEPIQTGYKAVDAM 156

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYL 210
            P+  GQR  +      GK+ +   ++  + D   K I   +G++   +   +   E++ 
Sbjct: 157 VPIGRGQRELIIGDRQTGKTAMAIDAIINQRDTGVKCIYVAIGQKASTIANVVRKLEEH- 215

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              L  +++VVA++ ES  L+ +AP +  T+ EYF  +G++ L+I D +++ A + R+I+
Sbjct: 216 -GALANTIIVVASASESAALQYLAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQIS 274

Query: 271 TNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDG 317
                 P    +P  VF    RLLER              G  +   G++TA+  +    
Sbjct: 275 LLLKRPPGREAFPGDVFYLHSRLLERAARVNEGYVERFTNGEVKGRTGSLTALPIIETQA 334

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   + 
Sbjct: 335 GDVSAFVPTNVISITDGQIFLQTQLFNSGLRPAVDPGISVSRVGGAAQTKIIKKLSGGIR 394

Query: 378 HLIHRFEE 385
             + ++ E
Sbjct: 395 TALAQYRE 402


>gi|123444375|ref|YP_001008340.1| F0F1 ATP synthase subunit alpha [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|158512902|sp|A1JTC8|ATPA_YERE8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122091336|emb|CAL14222.1| ATP synthase alpha subunit protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318608059|emb|CBY29557.1| ATP synthase alpha chain [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 513

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+P+DG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPVDGKGPVENDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   V   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|22266797|gb|AAM94911.1|AF522463_6 subunit alpha [Ilyobacter tartaricus]
          Length = 469

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 153/322 (47%), Gaps = 19/322 (5%)

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME----I 128
           P G+ E    GD V   G     P+     GRV+NALG+PIDG     KGD  +E    +
Sbjct: 79  PTGVKE----GDEVRATGEVAAVPAGEGLLGRVVNALGEPIDG-----KGDAKIEKRMML 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--LLSMFARSDC 186
             K    + R+ V +  +TGI+ ID   P+  GQR  +      GK+   L ++  +   
Sbjct: 130 ERKAHGIIARKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAVALDAIINQKGT 189

Query: 187 FDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
             K I   +G+R   V + ++       ++ + VV AT+ E   L+ MAP   V++ EYF
Sbjct: 190 GVKCIYVAIGQRRSTVAQIVKKLENAGAMEYTTVVAATASEPAPLQYMAPYCGVSMGEYF 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
             KG++VL++ D +++ A + RE++      P    YP  VF    RLLER      E  
Sbjct: 250 MDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHSRLLERAAKISDELG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   
Sbjct: 310 GGSITALPIIETQAGDVSAFIPTNVISITDGQIFLDSELFNSGFRPAINAGISVSRVGGS 369

Query: 364 AWSADEKKLVSSLTHLIHRFEE 385
           A     K++ + +   + ++ E
Sbjct: 370 AQIKAMKQVAAKVKLELAQYSE 391


>gi|253681068|ref|ZP_04861871.1| ATP synthase F1, alpha subunit [Clostridium botulinum D str. 1873]
 gi|253562917|gb|EES92363.1| ATP synthase F1, alpha subunit [Clostridium botulinum D str. 1873]
          Length = 502

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 164/337 (48%), Gaps = 9/337 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +D  G  + +  D V    +G  + I  GD+V   GR    P      GRV+NALG+P+D
Sbjct: 57  NDVYGMALNLEQDNVGCVLLGAEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  I  + P  ++RQ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGPI-KCTQTRAIELEAPGVIDRQSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPIL 230
           + +   ++  +     K I   +G++   V   +     +G  +  ++VV +T+ +S  L
Sbjct: 176 TAIAIDTIINQKGKNVKCIYVAIGQKQSTVAHIVNTLTEMG-AMDYTIVVSSTASDSAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + ++P +  ++ EYF  KG++VL+I D +++ A + R ++      P    YP  VF   
Sbjct: 235 QFLSPYSGCSMGEYFMHKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    SEK   G+ITA+  +     +    I  +V SI DG I L   L   G+ 
Sbjct: 295 SRLLERAARLSEKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQK 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P V+   SVSR+   A     K++  +L   + ++ E
Sbjct: 355 PAVNAGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE 391


>gi|10039450|dbj|BAB13358.1| H+-ATPase alpha subunit [Brevibacterium flavum]
          Length = 547

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 168/359 (46%), Gaps = 24/359 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 63  IGVAQNLEADRVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEAFLGRVINPLGQPIDGLG 122

Query: 118 SLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
            +  + D  +E+  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 123 EIASEEDRVLEL--QAPTVLERQPVEEPLATGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 180

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGREV---REFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G  +   R+ +E+     L+ + +V A 
Sbjct: 181 VCVDTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQ--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDAAGFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G+ITA+  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLSDELGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           L   G  P ++   SVSR+   A +   KK+  SL   +  F   RD+     +   +D
Sbjct: 359 LFNRGIRPAINVGVSVSRVGGAAQTKGMKKVAGSLRLDLAAF---RDLEAFATFASDLD 414


>gi|118443884|ref|YP_878998.1| F0F1 ATP synthase subunit alpha [Clostridium novyi NT]
 gi|158512414|sp|A0Q2Z6|ATPA_CLONN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118134340|gb|ABK61384.1| ATP synthase F1, alpha subunit [Clostridium novyi NT]
          Length = 502

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 9/337 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +D  G  + +  D V    +G  + I  GD+V   GR    P      GRV+NALG+P+D
Sbjct: 57  NDVYGMALNLEQDNVGCVLLGPEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  I  + P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGPI-KCTQTRAIELEAPGVIERKSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPIL 230
           + +   ++  + D   K I   +G++   V   +     +G  +  ++VV +T+ +S  L
Sbjct: 176 TAIAIDTIINQKDKNVKCIYVAIGQKQSTVAHIVNTLTEMG-AMDYTIVVSSTASDSAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + ++P +  ++AEYF  KG++VL+I D +++ A + R ++      P    YP  VF   
Sbjct: 235 QFLSPYSGCSMAEYFMLKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G+ITA+  +     +    I  +V SI DG I L   L   G+ 
Sbjct: 295 SRLLERAAKLSDKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQK 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P V+   SVSR+   A     K++  +L   + ++ E
Sbjct: 355 PAVNAGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE 391


>gi|149384497|gb|ABR25071.1| ATP synthase beta chain [Anapausia nicotianifolia]
          Length = 426

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 151/313 (48%), Gaps = 26/313 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V D+  P
Sbjct: 37  TTLGRIFNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVADLSAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLGD 212
              G +IG+  G+G+GK+  + +   ++   K      +   VGER RE  +   +    
Sbjct: 94  YRRGGKIGLPGGAGVGKT--VPIMESTNNIAKAHGGVSVSGGVGERTREGNDLYMEMKES 151

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA T+AEYF      +VLL +D+I RF 
Sbjct: 152 KVINEQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFV 211

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++ + G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 212 QAGSEVSASPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 269

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIH 381
              +  + LD   V +R LA +G YP VDPL S S +  + W   E+       +   + 
Sbjct: 270 APATTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQ 328

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 329 RYKELQDIIAILG 341


>gi|20467357|gb|AAL27809.1| ATPase beta subunit [Ceratozamia mexicana]
          Length = 441

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 149/313 (47%), Gaps = 24/313 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG      +  I    P  +        F+TGI+V+D+ T
Sbjct: 67  GATLGRIFNVLGEPVD---NLGPVNARTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLT 123

Query: 157 PLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +   +    
Sbjct: 124 PYRRGGKIGLFGGAGVGKTMLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLXVEMKES 182

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 183 GVINEQDISRSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDVLLFIDNIFRFV 242

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E+    G +P   GY  ++ +E+  L ERI  +    G+I ++ +V V  D+  DP
Sbjct: 243 QAGSEVXALLGXMPSXVGYQPTLSTEMGSLQERI--TSTXXGSIXSIQAVYVPADDLTDP 300

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381
              +  + LD    L+R LA +G YP VD L S S +  + W   E+  +    +   + 
Sbjct: 301 APATTFAHLDATTALSRGLAAKGIYPAVDXLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 359

Query: 382 RFEETRDIRLIGG 394
           R++E +DI  I G
Sbjct: 360 RYKELQDIIAILG 372


>gi|319899413|ref|YP_004159510.1| ATP synthase alpha chain [Bartonella clarridgeiae 73]
 gi|319403381|emb|CBI76945.1| ATP synthase alpha chain [Bartonella clarridgeiae 73]
          Length = 510

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 20/343 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + + +D V +   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMALNLEIDNVGVVIFGSDRDIREGDTVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-L 177
           + K      +  K P  + RQ V +   TG++VID   P+  GQR  V      GK+  L
Sbjct: 121 I-KTKERRRVDVKAPGIIPRQSVHEPMSTGLKVIDALIPIGRGQRELVIGDRQTGKTAIL 179

Query: 178 LSMFARSDCF--------DKV--IISLVGERGREVREFI---EDYLGDNLKKSVVVVATS 224
           L  F     F        DKV  I   +G++   V +F+   E++    L  S++V AT+
Sbjct: 180 LDTFLNQKSFHEERGREKDKVYCIYVAIGQKRSAVAQFVKVLEEH--GALDYSIIVAATA 237

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +S  ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP 
Sbjct: 238 SDSAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPG 297

Query: 285 SVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     ++   G++TA+  +    ++ +  I  +V SI DG I L  +L
Sbjct: 298 DVFYLHSRLLERAAKLNADNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNL 357

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 358 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 400


>gi|293363620|ref|ZP_06610375.1| ATP synthase F1, alpha subunit [Mycoplasma alligatoris A21JP2]
 gi|292552817|gb|EFF41572.1| ATP synthase F1, alpha subunit [Mycoplasma alligatoris A21JP2]
          Length = 525

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 161/338 (47%), Gaps = 9/338 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           N +  G  + +  ++V +   G    IS GD+V   G+   +       GRVI++LG PI
Sbjct: 56  NENTYGLALNLEEEVVGVTIFGDITSISEGDIVKRTGKVISVGVGDKMLGRVIDSLGNPI 115

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + K   + EI       M+R+ V +  +TGI  ID   P+  GQR  +      G
Sbjct: 116 DGKGPI-KTTKTREIFRVASGVMSRKEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTG 174

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPI 229
           K+ +   ++  +     K +   +G++   V + ++  L D   L+ + +VV+ + E   
Sbjct: 175 KTAIAIDTIINQKGKDVKCVYVAIGQKNSTVAQIVKK-LADTGALEYTTIVVSGASELAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
            + +AP T VTIAE +  KG +VL++ D +++ A + R ++      P    YP  VF  
Sbjct: 234 QQYIAPYTGVTIAEEWMEKGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             +LLER     KE   G+ITA+  +     + +  I  +V SI DG I    +L   G+
Sbjct: 294 HSQLLERAARVTKENGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQ 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P VD   SVSR+   A     KK+V SL   + ++ E
Sbjct: 354 RPAVDVGFSVSRVGSAAQIKAMKKVVGSLKLELAQYNE 391


>gi|306835880|ref|ZP_07468875.1| ATP synthase F1 sector alpha subunit [Corynebacterium accolens ATCC
           49726]
 gi|304568245|gb|EFM43815.1| ATP synthase F1 sector alpha subunit [Corynebacterium accolens ATCC
           49726]
          Length = 557

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 176/377 (46%), Gaps = 28/377 (7%)

Query: 66  NLDIVYICPVGIG--EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   I  V +G  E +  GD V   G    I     + GRVIN LG+PIDG   LG  
Sbjct: 79  NLDTNSIGVVVLGNYESLKEGDEVKRTGEVLSIPVGEDFLGRVINPLGQPIDG---LGPI 135

Query: 123 DLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS----- 175
           +   E  +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK+     
Sbjct: 136 ESEEERVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVTID 195

Query: 176 TLLSMFARSDCFDK-----VIISLVGERGR---EVREFIEDYLGDNLKKSVVVVATSDES 227
           T+L+  A  +  DK      I   +G++G     VR  +E++    L  + +V A + +S
Sbjct: 196 TILNQKANWESGDKDKQVRCIYVAIGQKGSTIASVRRTLEEH--GALDYTTIVAAPASDS 253

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
              + +AP +   + + +  +G++VL+I D +T+ A + R I+      P    YP  VF
Sbjct: 254 AGYKWLAPFSGAALGQQWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVF 313

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +
Sbjct: 314 YLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQ 373

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D     
Sbjct: 374 GVRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLAAY---RDLQAFAAFASDLDAASKA 430

Query: 406 AVHQVPIIYDFLKQSPS 422
            + +   + + LKQS S
Sbjct: 431 QLERGSRLVELLKQSES 447


>gi|14718212|gb|AAK72844.1| ATP synthase beta subunit [Scaevola aemula]
          Length = 283

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 138/267 (51%), Gaps = 21/267 (7%)

Query: 109 LGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LGKP+D   +LG  D S    I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGKPVD---NLGXVDTSATSPIHRSAPAFIQLDTXLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++     +        
Sbjct: 59  FGGAGVGKTVLIMELITNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQNIAE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273
            K  +V    ++ P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNDPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRL 360
              VL+R LA +G YP VDPL S S +
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTM 262


>gi|89513721|gb|ABD74705.1| ATP synthase beta subunit [Withania frutescens]
          Length = 329

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 38  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 94

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 95  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 154

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 155 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 214

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  +   
Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTTEGSITSIQAVYVPADDLTENAP 272

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +    LD   VL+R LA +G YP VDPL S S +
Sbjct: 273 ATTFRHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 307


>gi|58081506|gb|AAW65228.1| AtpB [Greeneothallus gemmiparus]
          Length = 338

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 143/294 (48%), Gaps = 26/294 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P   G
Sbjct: 2   LGRIFNVLGEPVDNSGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLSAPYRRG 60

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GD 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 61  GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQ 120

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 121 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 180

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 181 SALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 238

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           + LD   VL+R LA +G YP V    S           +E +L  +    I RF
Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVXXXLS-----------EEDRLTVAXARXIERF 281


>gi|289548968|ref|YP_003473956.1| ATP synthase F1 subunit alpha [Thermocrinis albus DSM 14484]
 gi|289182585|gb|ADC89829.1| ATP synthase F1, alpha subunit [Thermocrinis albus DSM 14484]
          Length = 503

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 22/376 (5%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            LG    +  D V I  +G    I  G LV   GR   +P      GRVI+ LG P+DG 
Sbjct: 60  TLGLAFNLEEDNVGIIVLGSESGIREGSLVRRTGRILDAPVGEGLIGRVIDPLGNPLDG- 118

Query: 117 DSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KG +  E  S V    P  + R+ V +  +TGI+ ID   P+  GQR  +      
Sbjct: 119 ----KGPIKYEYRSPVEKIAPGVVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRST 174

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGER---GREVREFIEDYLGDNLKKSVVVVATSDES 227
           GK+T+   ++  + D     I   +G++      + E +E +    ++ + VVVA++ + 
Sbjct: 175 GKTTICIDTILNQKDTDVYCIYVAIGQKRSTTARIIELLEKH--GAMEYTCVVVASATDP 232

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP    TI EYF   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 233 ASLQYLAPFVGCTIGEYFRDNGKHALVIYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVF 292

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      E   G++TA+  +     +    I  +V SI DG I L   L  +
Sbjct: 293 YLHSRLLERAAKLNDELGAGSLTALPIIETKAGDVAAYIPTNVISITDGQIYLEPDLFNK 352

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A     K++  +L   + +F   R++     +   +D    K
Sbjct: 353 GIRPAINVGLSVSRVGGAAQIKAMKQVAGTLRLDLAQF---RELEAFVQFASELDTATQK 409

Query: 406 AVHQVPIIYDFLKQSP 421
            +++   + + LKQ P
Sbjct: 410 IINRGLRLVELLKQEP 425


>gi|30961788|gb|AAP40008.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 369

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 16  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 75

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 76  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIIN 134

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVVV A++ +S  ++ +AP   V
Sbjct: 135 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVVNASASDSAAMQYLAPYAGV 192

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 193 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 252

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 253 VCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 312

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 313 SRVGGAAQIKATKQVSGTLRLDLAQYRE 340


>gi|52788855|gb|AAU87397.1| ATP synthase beta chain [Monachosorum henryi]
          Length = 383

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 151/315 (47%), Gaps = 22/315 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + +   +  I    P           F+TGI+V+D+  P  
Sbjct: 5   TTLGRISNVLGEPVDNPGPV-RSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S  G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSASGGVGERTREGNDPYMETKESKVTN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +VL  +D+  R   +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLPFIDNTLRLVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EASALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S  + + W   E+  +    +     R++E
Sbjct: 242 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTTS-QPWIVGEEHYETAQGVKQTSQRYKE 300

Query: 386 TRDIRLIGGYRPGVD 400
            +DI  I    PG+D
Sbjct: 301 LQDIIAI----PGLD 311


>gi|156598439|gb|ABU85479.1| ATP synthase CF1 alpha subunit [Musa acuminata]
          Length = 506

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 188/418 (44%), Gaps = 15/418 (3%)

Query: 13  EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           E YS+ + +V  G +  +      V  L + V  G+ V  Q      +G  + +  + V 
Sbjct: 18  EQYSREIKIVNTGTVLQVGDGIARVHGLDE-VMAGELVEFQ---EGTIGIALNLESNNVG 73

Query: 72  ICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   + S  I S
Sbjct: 74  VVLMGDGLMIQEGSSVKATGRIAQIPVSEGYLGRVINALAKPIDGRGEISASE-SRLIES 132

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +     V
Sbjct: 133 PAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNV 192

Query: 191 IISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSS 247
           I   V  G++   V + +  +      +  +VVA + +SP  L+ +AP T   +AE+F  
Sbjct: 193 ICVYVAIGQKASSVAQVVTTFREKGAMEYTIVVAETADSPATLQYLAPYTGAALAEFFMY 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KG 305
           +G + L+I D +++ A + R+++      P    YP  VF    RLLER   S     +G
Sbjct: 253 RGQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSNSSLGEG 312

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A 
Sbjct: 313 SMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQ 372

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               K++       + +F E   +     +   +D      + +   + + LKQS SD
Sbjct: 373 IKAMKQVAGKSKLELAQFTE---LEAFAQFASDLDKATQNQLARGQRLRELLKQSQSD 427


>gi|113910922|gb|ABI48193.1| ATPase beta subunit [Leptopteris superba]
          Length = 449

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N  G+P+D    +     S  I    P +          +TGI+V+D+  P   G 
Sbjct: 70  GRISNVPGEPVDNSSPVDTSTTS-PIHRSAPASTQSDTKLSISETGIKVVDLSAPYRRGG 128

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+  +    +  A++     V   +  ER RE  +   +     +    
Sbjct: 129 KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 187

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 188 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 247

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 248 SALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTL 305

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           +  D   VL R LA +G YP VDPL S   +  + W   E+  +    +   + R++E +
Sbjct: 306 AYSDATTVLPRGLAAKGIYPAVDPLDSTPTML-QPWIVGEEHYETAQGVKQTLQRYKEPQ 364

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 365 DIIAILG 371


>gi|86438834|emb|CAJ43382.1| ATP synthase alpha subunit [Lactobacillus gallinarum]
 gi|133917170|emb|CAJ33226.1| ATP synthase alpha subunit [Lactobacillus gallinarum]
          Length = 353

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 158/342 (46%), Gaps = 19/342 (5%)

Query: 57  DNLGQVIRINLDI--VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPI 113
           DN    I  NLD   V I  +G  ++I  GD V   GR    P      GRV+N LG+P+
Sbjct: 3   DNGSYGIAQNLDASDVGIIILGKFDDIREGDRVQRTGRIMSVPVGDALIGRVVNPLGQPV 62

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + K D +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      G
Sbjct: 63  DGLGEI-KADKTRPIEEKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTG 121

Query: 174 KSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSD 225
           K++L +         D + I + +G++   VR  +E      LK+      ++VV A   
Sbjct: 122 KTSLAIDTILNQKNQDVICIYVAIGQKESTVRTQVE-----TLKRFGAMDYTIVVEAGPS 176

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           E   +  +AP     + E F   G +VL++ D +++ A + RE++      P    YP  
Sbjct: 177 EPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGD 236

Query: 286 VFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG I L   L 
Sbjct: 237 VFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLF 296

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             G  P +D   SVSR+   A     KK+  +L   +  F E
Sbjct: 297 FAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAFRE 338


>gi|320539767|ref|ZP_08039428.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Serratia
           symbiotica str. Tucson]
 gi|320030170|gb|EFW12188.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Serratia
           symbiotica str. Tucson]
          Length = 513

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGVPIDGKGPVENDGFS-PVEAIAPGVIERQSVDQPVQTGYKSVDAMIPVGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  V      GK+ L+  ++  + D   K +   +G++   +   +   ED+    L  +
Sbjct: 164 RELVIGDRQTGKTALVVDTIINQRDSGIKCVYVAIGQKASTIANVVRKLEDH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|227877279|ref|ZP_03995352.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus JV-V01]
 gi|295692631|ref|YP_003601241.1| ATP synthase subunit alpha [Lactobacillus crispatus ST1]
 gi|227863135|gb|EEJ70581.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus JV-V01]
 gi|295030737|emb|CBL50216.1| ATP synthase subunit alpha [Lactobacillus crispatus ST1]
          Length = 506

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 19/373 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           IS +  V Y    +++   L D +  +    DN    I  NL+   V I  +G  + I  
Sbjct: 28  ISEVGVVTYVGDGIARAHGLNDVLSGELLKFDNGSYGIAQNLESNDVGIIILGQFDNIRE 87

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG   + K D S  I +K P  M+RQ V+
Sbjct: 88  GDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTDKSRPIEAKAPGVMDRQSVD 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + VG++  
Sbjct: 147 QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQDVICIYVAVGQKES 206

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 207 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGRDVLI 261

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER      +   G++TA+  
Sbjct: 262 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNDKLGGGSLTALPI 321

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 322 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 381

Query: 373 VSSLTHLIHRFEE 385
             +L   +  + E
Sbjct: 382 AGTLRTDLAAYRE 394


>gi|149384817|gb|ABR25217.1| ATP synthase beta chain [Thelypteris seemannii]
          Length = 426

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P            +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLPFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|224368444|ref|YP_002602607.1| F0F1 ATP synthase subunit alpha [Desulfobacterium autotrophicum
           HRM2]
 gi|223691160|gb|ACN14443.1| AtpA1 [Desulfobacterium autotrophicum HRM2]
          Length = 517

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 14/292 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRVI+  GKP+D      KG ++      +    P  M R  V    +TGI+VID   P+
Sbjct: 106 GRVIDPTGKPMDN-----KGPMNHLARWPVERPAPEIMERAPVSAPLETGIKVIDTLIPI 160

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
             GQR  +      GK+ +   ++  +       + + +G+R   V + ++     D L 
Sbjct: 161 GKGQRQLILGDRQTGKTAIAVDTIINQRGKNVVCVYAAIGQRESAVAKVLQTLEAHDALS 220

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            +++V A   + P L+ +AP  A TI EYF ++G +VL++ D +TR A + RE++     
Sbjct: 221 HTILVAAGCQDPPGLQYIAPYAACTIGEYFMNQGRDVLIVYDDLTRHARAYRELSLLLER 280

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILD 333
            P    +P  +F    RLLER      EKGN  +TA+  +  +  N +  I  ++ SI D
Sbjct: 281 PPGREAFPGDIFYVHSRLLERSTHLRAEKGNGSLTALPVIETEAQNLSAYIPTNLISITD 340

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G I L+     +G  P VD   SVSR+  KA  +    +  SL     +FEE
Sbjct: 341 GQIYLSPDFFAKGVLPAVDVGKSVSRVGGKAQPSAFHAITGSLRLSYSQFEE 392


>gi|25808443|gb|AAN74348.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 351

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 8   EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 67

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 68  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 126

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 127 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 184

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 185 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 244

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 245 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 304

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 305 SRVGGAAQIKATKQVSGTLRLDLAQYRE 332


>gi|269812163|gb|ACZ44461.1| ATP synthase F1 subunit alpha [Pythium ultimum]
          Length = 510

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 180/395 (45%), Gaps = 23/395 (5%)

Query: 44  CLGDFVVHQGK----NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP- 97
           C G   +  G+    N+ N+ G  + +  D+V +       EI  G+ V   G     P 
Sbjct: 38  CYGLTKIQAGEMVEFNNGNIKGMALNLEPDVVGVVVFSNDREIQEGNFVRRTGSIVSVPV 97

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            A   GRV++ALG+PIDG   +    +S  +  K P  M RQ V +  +TG++ +D   P
Sbjct: 98  GAELLGRVVDALGQPIDGKGQITTNQIS-RVEIKAPGIMPRQSVNEPVQTGLKAVDSLIP 156

Query: 158 LCHGQRIGVFAGSGIGKSTLL--------SMFARSDCFDKV--IISLVGERGREVREFIE 207
           +  GQR  +      GK+++             + D  +++  I   VG++   + E  +
Sbjct: 157 IGRGQRELIIGDRQTGKTSIAIDTIINQREPHLKKDVDNQLYCIYVGVGQKRSTIAELTK 216

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                N +  S++V AT+ +S  L+ +AP T   + EYF   G + ++  D +++ A + 
Sbjct: 217 TLEEKNAMFFSIIVAATASDSAPLQFLAPYTGCALGEYFRDNGKHAVIFYDDLSKQAVAY 276

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPI 324
           R+++      P    YP  VF    RLLER     K+   G++TA+  +     + +  I
Sbjct: 277 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKKIGGGSLTALPIIETQAGDVSAYI 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L   L  +G+ P +    SVSR+   A     K++  ++   + +F 
Sbjct: 337 PTNVISITDGQIFLETELFNQGQRPAISVGLSVSRVGSAAQIKAMKQIAGTMKLELAQF- 395

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             R+++    +   +D    + +H+   + + LKQ
Sbjct: 396 --REVQAFAQFGSDLDATTQQQLHRGVRLTEMLKQ 428


>gi|299830473|ref|YP_003734844.1| ATP synthase F1 subunit alpha [Pythium ultimum]
 gi|269810850|gb|ACZ43879.1| ATP synthase F1 subunit alpha [Pythium ultimum]
          Length = 510

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 180/395 (45%), Gaps = 23/395 (5%)

Query: 44  CLGDFVVHQGK----NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP- 97
           C G   +  G+    N+ N+ G  + +  D+V +       EI  G+ V   G     P 
Sbjct: 38  CYGLTKIQAGEMVEFNNGNIKGMALNLEPDVVGVVVFSNDREIQEGNFVRRTGSIVSVPV 97

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            A   GRV++ALG+PIDG   +    +S  +  K P  M RQ V +  +TG++ +D   P
Sbjct: 98  GAELLGRVVDALGQPIDGKGQITTNQIS-RVEIKAPGIMPRQSVNEPVQTGLKAVDSLIP 156

Query: 158 LCHGQRIGVFAGSGIGKSTLL--------SMFARSDCFDKV--IISLVGERGREVREFIE 207
           +  GQR  +      GK+++             + D  +++  I   VG++   + E  +
Sbjct: 157 IGRGQRELIIGDRQTGKTSIAIDTIINQREPHLKKDVDNQLYCIYVGVGQKRSTIAELTK 216

Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                N +  S++V AT+ +S  L+ +AP T   + EYF   G + ++  D +++ A + 
Sbjct: 217 TLEEKNAMFFSIIVAATASDSAPLQFLAPYTGCALGEYFRDNGKHAVIFYDDLSKQAVAY 276

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPI 324
           R+++      P    YP  VF    RLLER     K+   G++TA+  +     + +  I
Sbjct: 277 RQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKKIGGGSLTALPIIETQAGDVSAYI 336

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L   L  +G+ P +    SVSR+   A     K++  ++   + +F 
Sbjct: 337 PTNVISITDGQIFLETELFNQGQRPAISVGLSVSRVGSAAQIKAMKQIAGTMKLELAQF- 395

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             R+++    +   +D    + +H+   + + LKQ
Sbjct: 396 --REVQAFAQFGSDLDATTQQQLHRGVRLTEMLKQ 428


>gi|25808403|gb|AAN74328.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808429|gb|AAN74341.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 7   EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 66

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 67  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 125

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 126 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 183

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 184 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 243

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 244 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 303

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 304 SRVGGAAQIKATKQVSGTLRLDLAQYRE 331


>gi|99640681|emb|CAJ45112.1| putative beta subunit of chloroplast ATP synthase [Salvinia
           oblongifolia]
 gi|166836578|gb|ABY90521.1| ATP synthase beta chain [Salvinia oblongifolia]
 gi|166836580|gb|ABY90522.1| ATP synthase beta chain [Salvinia oblongifolia]
          Length = 382

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 140/270 (51%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +NL +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 97  GNDLYIEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEK 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W    +  
Sbjct: 215 VYVPADDLTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 273

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 274 DTAQGVKETLQRYKELQDIIAI----PGLD 299


>gi|307683411|dbj|BAJ19684.1| ATP synthase CF1 alpha chain [Pseudotsuga sinensis var. wilsoniana]
          Length = 507

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 156/334 (46%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G  I  G  V   G+    P S  + GRV+NAL +PIDG 
Sbjct: 60  TIGIALNLGSDNVGVVLMGDGLMIQEGSSVKATGKIAQVPVSDAYLGRVVNALAQPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GQISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +    +     VI   V  G++   V + +  +     ++ ++VV  T+D S  L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVNTFRDRGAMEYTIVVAETADSSATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S+  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     KK+   L   + +F E
Sbjct: 359 NVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|226326991|ref|ZP_03802509.1| hypothetical protein PROPEN_00851 [Proteus penneri ATCC 35198]
 gi|225204828|gb|EEG87182.1| hypothetical protein PROPEN_00851 [Proteus penneri ATCC 35198]
          Length = 513

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 164/336 (48%), Gaps = 26/336 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGAVEHDGFSPVEMIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L+ 
Sbjct: 163 QRELIIGDRQTGKTALAVDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALEN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERAARVNAEYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQY 400

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +   +D    K ++    + + LKQ
Sbjct: 401 ---RELAAFSQFASDLDDATRKQLNHGQKVTELLKQ 433


>gi|25808407|gb|AAN74330.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 353

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 10  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 69

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 70  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 128

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 129 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 186

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 187 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 246

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 247 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 306

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 307 SRVGGAAQIKATKQVSGTLRLDLAQYRE 334


>gi|302342880|ref|YP_003807409.1| H+transporting two-sector ATPase alpha/subunit beta central region
           [Desulfarculus baarsii DSM 2075]
 gi|301639493|gb|ADK84815.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Desulfarculus baarsii DSM 2075]
          Length = 439

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 169/373 (45%), Gaps = 24/373 (6%)

Query: 26  ISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
           I+ I  +   +  L +  V LG+  V Q      LGQVIR+N + V I   G  + IS  
Sbjct: 5   ITKIKEITGNIATLEASGVGLGELAVVQSPGQSTLGQVIRVNQENVTIQVFGGTKGISTS 64

Query: 85  DLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMNRQR 140
           D V   G   ++       GR+ N  G PIDG    G   +  EI    P   PA NR  
Sbjct: 65  DQVRFLGHPMQVKYGPSLMGRIFNGSGVPIDG----GPEPVEEEIAIGGPSFNPA-NRII 119

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
            ++  +T I +ID+F  L   Q++ +F+  G   + LL+        D +I+  +G +  
Sbjct: 120 PQQMIRTNIPMIDLFNSLVVSQKLPIFSIPGEPYNQLLARVGMQAEADIIILGGMGLKFD 179

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILR-KMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           +   F   +    +   V++       P++   + P  A+ +AE F+  G  VL++L  +
Sbjct: 180 DFTFFKRTFEESGVMNRVIMFIHQASDPVVECLLVPDMALAVAERFAEAGQRVLVLLTDM 239

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           T FA S++EI+ +  ++P  RGYP  ++S+L    E+    E   G IT +    + GD+
Sbjct: 240 TNFADSLKEISISMEQIPSNRGYPGDLYSQLASRYEKAVDIEG-AGGITLLAVTTMPGDD 298

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSS 375
              P+ D+   I +G   L        R+  +DP  S+SRL      K    D   ++++
Sbjct: 299 VTHPVPDNTGYITEGQFYL--------RHGVIDPFGSLSRLKQNVVGKVTRKDHNDIMNT 350

Query: 376 LTHLIHRFEETRD 388
           +  L     E+R+
Sbjct: 351 MIRLYSDCRESRN 363


>gi|300702310|ref|XP_002995166.1| hypothetical protein NCER_102049 [Nosema ceranae BRL01]
 gi|239604028|gb|EEQ81495.1| hypothetical protein NCER_102049 [Nosema ceranae BRL01]
          Length = 485

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 168/342 (49%), Gaps = 22/342 (6%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRIN--LDIVYICPVGIGEEISLGDLVFHWGRFRISPS 98
           +Y  + +  +  G N    GQV+ +     +V +     G ++    + F     ++  S
Sbjct: 37  KYAEIVNLTLADGTNKQ--GQVLEVQGKKAVVQVFEGTAGIDVKKTHVTFTGHTLKMPVS 94

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GRV N  G PIDG  ++   D  ++I  +    + R   E+  +TGI  ID+   +
Sbjct: 95  EDMLGRVFNGSGIPIDGGCNVIASDY-LDIQGQPLNPIVRTYPEEMIQTGISSIDVMNSI 153

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR-------------SDCFDKVIISLVGERGREVREF 205
             GQ+I +F+GSG+  + + +   R             SD    +I + +G   +E  +F
Sbjct: 154 ARGQKIPIFSGSGLPHNEVAAQICRQAGLVKKKDVKDMSDENFAIIFAAMG-VNQETAKF 212

Query: 206 IEDYLGD--NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
            ++   +  + +++ + +  +++  I R + P  A+T AEY + + + +VL+IL  ++ +
Sbjct: 213 FKNSFDETGSSERTALFLNLANDPTIERIITPRLALTAAEYLAYEREMHVLVILTDMSSY 272

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A S+RE++    E+P  RGYP  ++++L  + ER G  + + G+IT +  + +  D+   
Sbjct: 273 ADSLREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRIDGKNGSITQIPILTMPNDDITH 332

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 333 PIPDLTGFITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 374


>gi|291550535|emb|CBL26797.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus torques
           L2-14]
          Length = 461

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 157/318 (49%), Gaps = 22/318 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPID 114
           +G+++ I  D   I      E +SL +    L  H     +SP     GR  N +G+PID
Sbjct: 41  IGRIVEIYEDKAVIQVFEGSENMSLKNTHTKLTGHPMEIALSPD--ILGRTFNGIGQPID 98

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               L    L  ++       + R+      +TGI  ID  T L  GQ++ +F+G+G+  
Sbjct: 99  DLGPLVSA-LKRDVNGLPLNPVRREYPRNYIRTGISAIDGLTTLIRGQKLPIFSGNGLPH 157

Query: 175 STLLSMFAR-----SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV------VAT 223
             L +   +     SD  +K  I         V+  + D+  +  ++S V       +  
Sbjct: 158 DQLAAQIVKQASLGSDSDEKFAIVFAA---MGVKHDVADFFRNTFEESGVADHVAMFLNL 214

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGY 282
           +++  + R + P  A+T AEY + + + ++L+IL  +T FA ++RE++++ GE+P  +G+
Sbjct: 215 ANDPVVERLITPKVALTAAEYLAFEQNMHILVILTDMTSFAEAMREVSSSKGEIPSRKGF 274

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  ++SEL  + ER G  +   G++T +  + +  D+   PI D    I +G IVL+R L
Sbjct: 275 PGYLYSELATIYERAGIVQGVNGSVTQLPILTMPNDDITHPIPDLTGYITEGQIVLDRPL 334

Query: 343 AEEGRYPPVDPLASVSRL 360
             +  YPP++ L S+SRL
Sbjct: 335 HGQSIYPPINILPSLSRL 352


>gi|169261001|gb|ACA52100.1| ATP synthase beta subunit [Plagiogyria japonica]
          Length = 287

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 133/270 (49%), Gaps = 15/270 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR  N LG+P+D    + +   +  I    P           F+TGI+V+D+  P   G 
Sbjct: 8   GRTSNVLGEPVDNPGPV-ESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 66

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV---- 218
           +IG F G+G GK+ L++    +       +S+ G  G   RE  + Y+     K +    
Sbjct: 67  KIGSFGGAGAGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINERA 126

Query: 219 -------VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
                  +V   ++E P  R     TA T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 127 LSESKVALVYGQTNEPPGARTRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 186

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 187 ALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATTFA 244

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            LD   VL+R  A +G YP VDPL S S +
Sbjct: 245 HLDATTVLSRGSAAKGTYPAVDPLDSTSTM 274


>gi|25808463|gb|AAN74358.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGASVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRTLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|290490208|gb|ADD31511.1| ATP synthase CF1 alpha subunit protein [Plumbago auriculata]
          Length = 507

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 170/368 (46%), Gaps = 12/368 (3%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +
Sbjct: 63  IALNLESKNVGVVLMGDGLMIQEGSSVKARGRIAQIPVSEAYLGRVINALAKPIDGRGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 SSSEFRL-IDSPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPL 236
               +     VI   V  G++   V + +  +      +  +VVA + +SP  L+ +AP 
Sbjct: 182 DTILNQKGQNVICVYVAIGQKASSVAQVVATFQEKGAMEYTIVVAETADSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
              S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKSSSHLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   L   + +F E   +     +   +D +    + +   + 
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKLKLELAQFTE---LEAFAQFASDLDKVTQNQLARGQRLR 418

Query: 415 DFLKQSPS 422
           + LKQS S
Sbjct: 419 ELLKQSQS 426


>gi|149384515|gb|ABR25080.1| ATP synthase beta chain [Dryopteris filix-mas]
          Length = 426

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 163/336 (48%), Gaps = 29/336 (8%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   
Sbjct: 40  GRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 97  GGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 156

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +  E
Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP   + 
Sbjct: 217 VSALPGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386
            + LD   V  R LA +G YP VDPL S S ++ + W   E+       +   + R++E 
Sbjct: 275 SAHLDATTVPPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRYKEL 333

Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 334 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|25808469|gb|AAN74361.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGIGVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|260426578|ref|ZP_05780557.1| ATP synthase F1, alpha subunit [Citreicella sp. SE45]
 gi|260421070|gb|EEX14321.1| ATP synthase F1, alpha subunit [Citreicella sp. SE45]
          Length = 509

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 150/309 (48%), Gaps = 10/309 (3%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R+       GRV++ LG+P+DG  +    + S  +    P  + R  V    +TG+ V+
Sbjct: 97  LRVPVGEALLGRVVDPLGRPLDGGPAPDCAE-SHPVERPAPAIIERDAVAAPLETGVLVV 155

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY 209
           D    L  GQR  +      GK++L ++ A  +   K +I +   VG+R   V+  I   
Sbjct: 156 DSLFALGRGQRELIVGDRATGKTSL-AVDAMVNQKGKDVICVYVAVGQRATAVQRVIAAV 214

Query: 210 L--GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
              GD L + + VV  +  +P L+ +AP   +T+AEYF  +G + L+I+D +TR A + R
Sbjct: 215 REHGD-LSRCIFVVGGASAAPGLQWIAPFAGMTMAEYFRDRGQHALVIIDDLTRHAATHR 273

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIA 325
           E+A  + E P    YP  +F    RLLER     +E+  G++TA+     D  N +  I 
Sbjct: 274 ELALLTREPPGREAYPGDIFYLHARLLERAAKLSAERGGGSLTALPIAETDAGNLSAYIP 333

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++ SI DG IVL+  L    + P VD   SVSR+  KA     +K+   +     +F+E
Sbjct: 334 TNLISITDGQIVLDSHLFASNQRPAVDVGLSVSRVGGKAQLEALRKVSGRVRLDYAQFQE 393

Query: 386 TRDIRLIGG 394
                  GG
Sbjct: 394 LEMFTRFGG 402


>gi|86143150|gb|ABC86675.1| ATP synthetase beta subunit [Withania somnifera]
 gi|89513719|gb|ABD74704.1| ATP synthase beta subunit [Withania coagulans]
          Length = 314

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  P
Sbjct: 33  ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 89

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+       
Sbjct: 90  YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 149

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
              +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +
Sbjct: 150 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 209

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  +   
Sbjct: 210 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTTEGSITSIQAVYVPADDLTENAP 267

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +    LD   VL+R LA +G YP VDPL S S +
Sbjct: 268 ATTFRHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 302


>gi|25808405|gb|AAN74329.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808425|gb|AAN74339.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808433|gb|AAN74343.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808439|gb|AAN74346.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808445|gb|AAN74349.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808447|gb|AAN74350.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808453|gb|AAN74353.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808457|gb|AAN74355.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808461|gb|AAN74357.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808475|gb|AAN74364.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808485|gb|AAN74369.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808491|gb|AAN74372.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808493|gb|AAN74373.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808497|gb|AAN74375.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|30961790|gb|AAP40009.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 372

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 17  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 76

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 77  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIIN 135

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVVV A++ +S  ++ +AP   V
Sbjct: 136 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVVNASASDSAAMQYLAPYAGV 193

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 194 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 253

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 254 VCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 313

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 314 SRVGGAAQIKATKQVSGTLRLDLAQYRE 341


>gi|71894183|ref|YP_278291.1| F0F1 ATP synthase subunit beta [Mycoplasma synoviae 53]
 gi|71850971|gb|AAZ43580.1| ATP synthase beta chain [Mycoplasma synoviae 53]
          Length = 470

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 142/276 (51%), Gaps = 9/276 (3%)

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS----MF 181
           +E+ S + P  N     +  +TGI+ ID F P+  G +IG+F G+G+GK+ L+       
Sbjct: 103 VEMDSTIYPNNNFTTKPQILETGIKAIDFFIPVLSGAKIGLFGGAGVGKTVLMKEVIFTL 162

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           ++ D     I    GER RE  E  ++    NL K S++ V+  +E    R       VT
Sbjct: 163 SKKDKKTTSIFIGAGERSREAIELYDELKFSNLMKNSIIFVSRMNELAGSRMSIVPIGVT 222

Query: 241 IAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEY   ++ +NVLL +D+I RF  +  E++ +  + P   GY  ++ +++  +  RI  
Sbjct: 223 AAEYLRDTQKENVLLFIDNIFRFLQAGNEMSASLDKKPSLGGYQATLNTDISYVENRIFT 282

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  E G IT+  +V +  D+ +DP A ++   L+G +VL+R +  +  +P +DPLAS S 
Sbjct: 283 N--ENGTITSFQTVFLPMDDLSDPSAVAIFKHLNGSLVLSREITAKNIFPAIDPLASSSD 340

Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394
             D+     E    +     ++ R++E  D+ LI G
Sbjct: 341 SVDERIIGKEHYNAIVEAKKILQRYKELEDVILILG 376


>gi|25808459|gb|AAN74356.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|160893775|ref|ZP_02074559.1| hypothetical protein CLOL250_01329 [Clostridium sp. L2-50]
 gi|156864760|gb|EDO58191.1| hypothetical protein CLOL250_01329 [Clostridium sp. L2-50]
          Length = 502

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 144/293 (49%), Gaps = 12/293 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GR+INALG PIDG  ++ + D  M +  + P   +RQ V +  +TGI  ID   P+  
Sbjct: 104 FLGRIINALGAPIDGKGAIKEADY-MPVEQEAPSIADRQSVNEPLQTGILSIDSMFPIGK 162

Query: 161 GQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY-LGDNLKKS 217
           GQR  +      GK+++ L         D V I + +G++   V + +      D +  +
Sbjct: 163 GQRELIIGDRQTGKTSIALDTIINQRGKDVVCIYVAIGQKASTVAKIVSTLEKNDAMDYT 222

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++V +T+ +   L+ +AP    ++AEYF  KG +VL++ D +++ A + R ++   G  P
Sbjct: 223 IIVASTASDPAPLQYIAPYAGTSMAEYFMHKGKDVLIVYDDLSKHAVAYRTLSLLLGRSP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEK-----GNITAVISVLVDGDNHNDPIADSVRSIL 332
               YP  VF    RLLER   S K K     G+ITA+  +     + +  I  +V SI 
Sbjct: 283 GREAYPGDVFYLHSRLLER---SSKLKDSLGGGSITALPIIETQAGDVSAYIPTNVISIT 339

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           DG I L   L   G  P V+   SVSR+   A +   KK   ++   + +F E
Sbjct: 340 DGQIFLESDLFFSGMRPAVNVGLSVSRVGGAAQTKAMKKATGTVRIDLAQFRE 392


>gi|25808501|gb|AAN74377.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGISVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|156739782|gb|ABU93544.1| ATP synthase beta subunit [Diacalpe annamensis]
          Length = 394

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|25808421|gb|AAN74337.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|85060390|ref|YP_456092.1| F0F1 ATP synthase subunit alpha [Sodalis glossinidius str.
           'morsitans']
 gi|124007213|sp|Q2NQ88|ATPA_SODGM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|84780910|dbj|BAE75687.1| ATP synthase alpha subunit [Sodalis glossinidius str. 'morsitans']
          Length = 513

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKVPLEHDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GKS L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKSALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERASRVNAEYVENYTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|331270435|ref|YP_004396927.1| ATP synthase F1 subunit alpha [Clostridium botulinum BKT015925]
 gi|329126985|gb|AEB76930.1| ATP synthase F1, alpha subunit [Clostridium botulinum BKT015925]
          Length = 502

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 164/337 (48%), Gaps = 9/337 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +D  G  + +  D V    +G  + I  GD+V   GR    P      GRV+NALG+P+D
Sbjct: 57  NDVYGMALNLEQDNVGCVLLGPEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  I  + P  ++RQ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGPI-KCTQTRAIELEAPGVIDRQSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGK 175

Query: 175 STL-LSMFARSDCFD-KVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPIL 230
           + + +       C + K I   +G++   V   +     +G  +  ++VV +T+ +S  L
Sbjct: 176 TAIAIDTIINQKCKNVKCIYVAIGQKQSTVAHIVNTLTEMG-AMDYTIVVSSTASDSAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + ++P +  ++ EYF  KG++VL+I D +++ A + R ++      P    YP  VF   
Sbjct: 235 QFLSPYSGCSMGEYFMHKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G+ITA+  +     +    I  +V SI DG I L   L   G+ 
Sbjct: 295 SRLLERAARLSDKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQK 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P V+   SVSR+   A     K++  +L   + ++ E
Sbjct: 355 PAVNAGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE 391


>gi|156739796|gb|ABU93551.1| ATP synthase beta subunit [Ctenitis rhodolepis]
          Length = 389

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N  G+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 29  TTLGRISNVPGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 86  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 145

Query: 212 ---DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V +     +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 146 INEQNISESKVALVHGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 206 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 264 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 322

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 323 KELQDIIAILG 333


>gi|304440603|ref|ZP_07400487.1| V-type ATP synthase, subunit A [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304370790|gb|EFM24412.1| V-type ATP synthase, subunit A [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 589

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 18/279 (6%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P  NR  +++   TG RV D+F P+  G    V  G G GK+      A+    D ++  
Sbjct: 199 PVKNRLPIDRLLVTGQRVFDVFFPIAKGGTTAVPGGFGTGKTMTQHQIAKYCDADIIVYI 258

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ E +ED+           L    +++A +   P+  + A + T VTIAEYF
Sbjct: 259 GCGERGNEMTEVLEDFPKLIDPHTNKPLMDRTILIANTSNMPVAAREASIYTGVTIAEYF 318

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE---K 302
             +G +V L+ DS +R+A ++REI+    E+P   GYP  + S +    ER G +E    
Sbjct: 319 RDQGYHVALMGDSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAEFYERAGYAETLSN 378

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS---- 358
            +G++T + +V   G + ++P+ ++ +  ++  + L++ LA    YP ++ + S S    
Sbjct: 379 NEGSVTLIGAVSPAGGDFSEPVTENTKRFVNVFLALDKELAYSRHYPAINWMNSYSGYVK 438

Query: 359 ---RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
                 D     D   L +    L+H+  +  +I ++ G
Sbjct: 439 MLKNYYDMNLDGDLPALRAKFLDLLHKEAKLNEIVMLVG 477


>gi|260577555|ref|ZP_05845494.1| ATP synthase F1, alpha subunit [Corynebacterium jeikeium ATCC
           43734]
 gi|258604279|gb|EEW17517.1| ATP synthase F1, alpha subunit [Corynebacterium jeikeium ATCC
           43734]
          Length = 556

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 24/385 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG-D 116
           +G    ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+ IDG  
Sbjct: 74  IGVAQNLDTDSVGVVILGNFETLKEGDEVKRTGEVLSIPVGEKFLGRVINPLGQAIDGLG 133

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           D   + + ++E+  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 134 DIESEEERALEL--QAPSVLMRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTS 191

Query: 176 ----TLLSM---FARSDCFDKV--IISLVGERGR---EVREFIEDYLGDNLKKSVVVVAT 223
               T+L+    +A  D   +V  I   VG++G     +R+ +ED+    L+ + +V A 
Sbjct: 192 VCIDTILNQRDNWATGDPKQQVRCIYVAVGQKGSTIASIRKTLEDH--GALEYTTIVAAP 249

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP T   + +++  +G +VL+I D +T+ A + R I+      P    YP
Sbjct: 250 ASDSAGFKWLAPFTGAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 309

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +    ++ +  I  +V SI DG + L   
Sbjct: 310 GDVFYLHSRLLERAAKLNDELGGGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESD 369

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D 
Sbjct: 370 LFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFAAFASDLDP 426

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
                + +   + + LKQ  ++  S
Sbjct: 427 ASKAQLERGKRLVELLKQKETEPQS 451


>gi|58584572|ref|YP_198145.1| F0F1 ATP synthase subunit alpha [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|75497937|sp|Q5GSX1|ATPA_WOLTR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|58418888|gb|AAW70903.1| F0F1-type ATP synthase, alpha subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 513

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 173/369 (46%), Gaps = 16/369 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G V+ ++ D   I  +G   ++  GD V   G     P      GRV+NALG  ID    
Sbjct: 63  GIVLDLDHDTAGIVVLGNDRDVKEGDTVKCSGDVMQVPVGHELLGRVVNALGHSIDNSGE 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-- 176
           + +    M++ SK P  ++R+ V +  +TGI++ID+  P+  GQR  V     IGK+T  
Sbjct: 123 I-RSKNRMDMESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELVIGDRQIGKTTIA 181

Query: 177 LLSMFARSDCFDKV--------IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           L ++  +    D+V        +   +G++   V + +        L+ + VVVA++ + 
Sbjct: 182 LDTIVNQKKINDEVDENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDC 241

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +AP    TI E+F   G + L++ D +++ A + R+++      P    YP  +F
Sbjct: 242 APMQFLAPYAGCTIGEFFRDNGMHCLVVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIF 301

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      EK +G++TA+  +     + +  +  +V SI DG I L   L  +
Sbjct: 302 YVHSRLLERAAKMSDEKGRGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESELFHK 361

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-YRPGVDLILD 404
           G  P V+   SVSR+   A     KK+  S+   + ++ E  D    G      V L L+
Sbjct: 362 GFRPAVNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFAKFGSDLDASVQLSLN 421

Query: 405 KAVHQVPII 413
           K  + V ++
Sbjct: 422 KGKYLVELL 430


>gi|25808477|gb|AAN74365.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGASVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|212712647|ref|ZP_03320775.1| hypothetical protein PROVALCAL_03742 [Providencia alcalifaciens DSM
           30120]
 gi|212684863|gb|EEB44391.1| hypothetical protein PROVALCAL_03742 [Providencia alcalifaciens DSM
           30120]
          Length = 513

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 150/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGPVEHDGFSPVEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  V      GK+ L   ++  + D   K +   +G++   +   +   E++    L+ 
Sbjct: 163 QRELVIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALEN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|242371596|ref|ZP_04817170.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           M23864:W1]
 gi|242350663|gb|EES42264.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           M23864:W1]
          Length = 503

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 152/334 (45%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EIS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---NEISEGDEVKRTGRIMEVPVGDELIGRVVNPLGQPIDGQGPINSTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDQPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DELGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|207347654|gb|EDZ73754.1| YBR127Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 384

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 155/319 (48%), Gaps = 19/319 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ I  D  IV +     G ++    + F     RI  S    GR+ +  G+PID   
Sbjct: 65  GQVLEIRGDRAIVQVFEGTSGIDVKKTTVEFTGESLRIPVSEDMLGRIFDGSGRPIDNGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TG+  ID    +  GQ+I +F+ SG+  + +
Sbjct: 125 KVFAEDY-LDINGSPINPYARIYPEEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEI 183

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 184 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 243

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 244 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 303

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 304 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ 363

Query: 342 LAEEGRYPPVDPLASVSRL 360
           L  +G YPP++ L S+SRL
Sbjct: 364 LHNKGIYPPINVLPSLSRL 382


>gi|127514772|ref|YP_001095969.1| F0F1 ATP synthase subunit alpha [Shewanella loihica PV-4]
 gi|190358199|sp|A3QJR2|ATPA_SHELP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|126640067|gb|ABO25710.1| ATP synthase F1, alpha subunit [Shewanella loihica PV-4]
          Length = 513

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 165/345 (47%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   +++ G  V   GR    P      GRV+N LG+PIDG   +
Sbjct: 62  IALNLERDSVGAVVMGPYADLAEGQKVKTTGRILEVPVGRGLLGRVVNTLGQPIDGKGPI 121

Query: 120 GKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                S +E+++  P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L 
Sbjct: 122 DNDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELVIGDRQTGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D   K +   VG++   +   +   E++    L  +VVVVAT+ E+  L+ +
Sbjct: 180 IDAIINQKDSGIKCVYVAVGQKASTIANVVRKLEEH--GALANTVVVVATASEAAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|904161|gb|AAA70390.1| adenosine triphosphatase [Tinospora caffra]
          Length = 498

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  
Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVESRTTSPIHXSAPAFIQLXTKLSIFETGIKVVDLLA 160

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G + G+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 161 PYRRGGKXGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 220 GVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 280 QAGSEVSALLGRXXXAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382
              +  + LD   VL R LA +G YP VDPL S S  L  +    +  +    +     R
Sbjct: 338 APATTFAHLDATTVLXRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTSQR 397

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 398 YKELQDIIAILG 409


>gi|42520504|ref|NP_966419.1| F0F1 ATP synthase subunit alpha [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|81652515|sp|Q73HB2|ATPA_WOLPM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|42410243|gb|AAS14353.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 513

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 16/369 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G V+ ++ +   I  +G   ++  GD+V   G     P      GRV+NALG P+D D  
Sbjct: 63  GIVLDLDHNTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGHPMD-DGG 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +    M+I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+ 
Sbjct: 122 EIRAKNRMDIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIA 181

Query: 179 --SMFARSDCFDKV--------IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             ++  +    D+V        +   +G++   V + +        L+ + VVVA++ + 
Sbjct: 182 LDTIINQKKVNDEVNENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDC 241

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +AP    TI E+F   G + L+I D +++ A + R+++      P    YP  +F
Sbjct: 242 APMQFLAPYAGCTIGEFFRDNGMHCLIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIF 301

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +K +G++TA+  V     + +  +  +V SI DG I L   L  +
Sbjct: 302 YVHSRLLERAAKMSDKKGQGSLTALPIVETQAGDVSAYVPTNVISITDGQIFLESELFYK 361

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-YRPGVDLILD 404
           G  P V+   SVSR+   A     KK+  S+   + ++ E  D    G      V L L+
Sbjct: 362 GFRPAVNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFAKFGSDLDASVQLSLN 421

Query: 405 KAVHQVPII 413
           K  + V ++
Sbjct: 422 KGKYLVELL 430


>gi|25808467|gb|AAN74360.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIEMNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|323349841|gb|EGA84054.1| Atp1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 447

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 24  GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 79

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 80  SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 139

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 140 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 199

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 200 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 259

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 260 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 319

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 320 KALKQVAGSLKLFLAQYRE 338


>gi|68536422|ref|YP_251127.1| F0F1 ATP synthase subunit alpha [Corynebacterium jeikeium K411]
 gi|109939720|sp|Q4JUJ8|ATPA_CORJK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|68264021|emb|CAI37509.1| ATP synthase alpha chain [Corynebacterium jeikeium K411]
          Length = 545

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 24/385 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG-D 116
           +G    ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+ IDG  
Sbjct: 63  IGVAQNLDTDSVGVVILGNFETLKEGDEVKRTGEVLSIPVGEKFLGRVINPLGQAIDGLG 122

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           D   + + ++E+  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 123 DIESEEERALEL--QAPSVLMRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTS 180

Query: 176 ----TLLSM---FARSDCFDKV--IISLVGERGR---EVREFIEDYLGDNLKKSVVVVAT 223
               T+L+    +A  D   +V  I   VG++G     +R+ +ED+    L+ + +V A 
Sbjct: 181 VCIDTILNQRDNWATGDPKQQVRCIYVAVGQKGSTIASIRKTLEDH--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP T   + +++  +G +VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPFTGAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLNDELGGGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFAAFASDLDP 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
                + +   + + LKQ  ++  S
Sbjct: 416 ASKAQLERGKRLVELLKQKETEPQS 440


>gi|326433589|gb|EGD79159.1| ATP synthase subunit alpha isoform [Salpingoeca sp. ATCC 50818]
          Length = 535

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 157/340 (46%), Gaps = 14/340 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G  + I  GD+V   G     P      GRV++ALG PIDG   
Sbjct: 84  GMALNLEPDNVGVVVFGNDKLIREGDVVKRTGAIVDVPIGEALLGRVVDALGNPIDGQGP 143

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           L        +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK+   
Sbjct: 144 LPSDMARSRVGIKAPGIIPRQSVCEPMQTGIKAVDSLVPVGRGQRELIIGDRQTGKTAVA 203

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDES 227
             ++++    +D  D+      I   VG++   V + +E   G D LK S+++ AT+ ++
Sbjct: 204 IDSIINQKRFNDGTDESKKLYCIYVAVGQKRSTVAQLVERLRGADALKYSIIISATASDA 263

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP T  T+ EYF     + LLI D +++ A + R+++      P    YP  VF
Sbjct: 264 APLQYLAPYTGATMGEYFRDNKKHALLIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 323

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 324 YLHSRLLERAAKMSNEAGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFYK 383

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A +   K++   +   + ++ E
Sbjct: 384 GIRPAINVGLSVSRVGSAAQTKAMKQVAGKMKLELAQYRE 423


>gi|14718220|gb|AAK72848.1| ATP synthase beta subunit [Setchellanthus caeruleus]
          Length = 275

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 34  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 93

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 94  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 153

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +
Sbjct: 154 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQA 211

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 212 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 259


>gi|323334707|gb|EGA76080.1| Atp1p [Saccharomyces cerevisiae AWRI796]
          Length = 449

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 24  GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 79

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 80  SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 139

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 140 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 199

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 200 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 259

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 260 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 319

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 320 KALKQVAGSLKLFLAQYRE 338


>gi|262045808|ref|ZP_06018772.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus MV-3A-US]
 gi|293381677|ref|ZP_06627658.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 214-1]
 gi|260573767|gb|EEX30323.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus MV-3A-US]
 gi|290921724|gb|EFD98745.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 214-1]
          Length = 503

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 170/381 (44%), Gaps = 19/381 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           IS +  V Y    +++   L D +  +    DN    I  NL+   V I  +G  + I  
Sbjct: 25  ISEVGVVTYVGDGIARAHGLNDVLSGELLKFDNGSYGIAQNLESNDVGIIILGQFDNIRE 84

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG   + K D S  I +K P  M+RQ V+
Sbjct: 85  GDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTDKSRPIEAKAPGVMDRQSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + VG++  
Sbjct: 144 QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQDVICIYVAVGQKES 203

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 204 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGRDVLI 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER      +   G++TA+  
Sbjct: 259 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNDKLGGGSLTALPI 318

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 319 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 378

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             +L   +  + E       G
Sbjct: 379 AGTLRTDLAAYRELESFAQFG 399


>gi|256842842|ref|ZP_05548330.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256848794|ref|ZP_05554228.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus MV-1A-US]
 gi|256614262|gb|EEU19463.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256714333|gb|EEU29320.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus MV-1A-US]
          Length = 503

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 19/373 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           IS +  V Y    +++   L D +  +    DN    I  NL+   V I  +G  + I  
Sbjct: 25  ISEVGVVTYVGDGIARAHGLNDVLSGELLKFDNGSYGIAQNLESNDVGIIILGQFDNIRE 84

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG   + K D S  I +K P  M+RQ V+
Sbjct: 85  GDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTDKSRPIEAKAPGVMDRQSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + VG++  
Sbjct: 144 QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQDVICIYVAVGQKES 203

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 204 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGRDVLI 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER      +   G++TA+  
Sbjct: 259 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNDKLGGGSLTALPI 318

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 319 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 378

Query: 373 VSSLTHLIHRFEE 385
             +L   +  + E
Sbjct: 379 AGTLRTDLAAYRE 391


>gi|116754897|ref|YP_844015.1| V-type ATP synthase subunit B [Methanosaeta thermophila PT]
 gi|121693079|sp|A0B9K1|VATB_METTP RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|116666348|gb|ABK15375.1| Sodium-transporting two-sector ATPase [Methanosaeta thermophila PT]
          Length = 463

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 147/285 (51%), Gaps = 13/285 (4%)

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
           +  +SPS    GRV++  G+P DG   +   ++  EI+       +R++     +TGI  
Sbjct: 77  KMPLSPS--IIGRVLSGSGRPRDGGPPIVP-EVEREIIGAAINPASREKPRAFIQTGIST 133

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVRE 204
           ID    L  GQ++ +F+G+G+  + +    AR       ++ F  V+   +G    E + 
Sbjct: 134 IDGTNTLVRGQKLPIFSGAGLPHNDVALQIARQAKVLGEAEEF-AVVFCAMGITNEEAQH 192

Query: 205 FIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262
           F+ D+     L+++V+ +  +D+  + R + P   +T AEY +   D +VL+I   +T +
Sbjct: 193 FMADFERTGALERAVIFLNLADDPAVERLLTPKLGLTTAEYLAFDLDMHVLVIYTDMTNY 252

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
             S+R++     E+P  RGYP  ++++L    ER G  + +KG+IT    + + GD+   
Sbjct: 253 CESLRQMGAAREEVPGRRGYPGYMYTDLATNYERAGIIKGKKGSITQFPILTMPGDDITH 312

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           PI D    I +G ++++R L  +G YPP+D   S+SRL +    A
Sbjct: 313 PIPDLSGYITEGQLIVSRELHRKGIYPPIDIRPSLSRLMNSGIGA 357


>gi|30961786|gb|AAP40007.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 364

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 9   EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 68

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 69  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDTIIN 127

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVVV A++ +S  ++ +AP   V
Sbjct: 128 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVVNASASDSAAMQYLAPYAGV 185

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 186 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 245

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 246 VCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 305

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 306 SRVGGAAQIKATKQVSGTLRLDLAQYRE 333


>gi|325265565|ref|ZP_08132268.1| ATP synthase F1, beta subunit [Clostridium sp. D5]
 gi|324029197|gb|EGB90509.1| ATP synthase F1, beta subunit [Clostridium sp. D5]
          Length = 329

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 8/247 (3%)

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDY 209
           +  P   G ++G+F G+G+GK+ L+     +   +   IS+   VGER RE  + + E  
Sbjct: 1   MLAPYTKGGKVGLFGGAGVGKTVLIQELINNIAKEHGGISVFAGVGERTREGNDLYYEMQ 60

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268
               + K+ +V    +E P  R    LT +T+AE+F  K   +VLL +D+I RF  +  E
Sbjct: 61  ESGVIDKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDKEHQDVLLFIDNIFRFTQAGSE 120

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   + 
Sbjct: 121 VSALLGRVPSAVGYQPTLATEMGALQERI--TSTRDGSITSVQAVYVPADDLTDPAPATT 178

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387
            + LD   VL+R++ E G YP VDPL S SR+ D     +E  +    +  ++ ++ + +
Sbjct: 179 FAHLDATTVLSRAITELGIYPAVDPLESTSRIMDPLILGEEHYQTAREVQEVLQKYNDLQ 238

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 239 DIIAILG 245


>gi|310947778|gb|ADP50708.1| ATP synthase beta chain [Adiantum capillus-veneris]
          Length = 370

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 22/302 (7%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 59  FGGAGVGKTVLITESINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINEQNISES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLI 392
             VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI 295

Query: 393 GG 394
            G
Sbjct: 296 LG 297


>gi|149384397|gb|ABR25021.1| ATP synthase beta chain [Asplenium harpeodes]
          Length = 426

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 156/321 (48%), Gaps = 24/321 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+P+D   +LG  +   +  I    P +          +TG
Sbjct: 28  GPLSVPVGETTLGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPASTQLDTKLSISETG 84

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR- 203
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE   
Sbjct: 85  IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVSGGVG-ERTREGND 143

Query: 204 ---EFIEDYLGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              E  E  + +  N+ +S V  V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 144 LHMEMKESKVTNEQNISESKVAPVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 203

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 204 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 261

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LV 373
             D+  DP   +  + LD   VL R LA +G YP VDPL S S +  + W   E+     
Sbjct: 262 PADDLTDPAPATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTA 320

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 321 QGVKQTLQRYKELQDIIAILG 341


>gi|326468653|gb|EGD92662.1| mitochondrial ATP synthase [Trichophyton tonsurans CBS 112818]
          Length = 505

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 145/304 (47%), Gaps = 29/304 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N  G PID    + KG     I ++ P  + +    +   TGI+V+D+  P   G
Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
            +IG+F G+G+GK+     L++  A++     V    VGER RE  +   +         
Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D   K  +V    +E P  R    LT              VLL +D+I RF  +  E++ 
Sbjct: 250 DGESKVALVFGQMNEPPGARARVALT--------------VLLFIDNIFRFTQAGSEVSA 295

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++  ++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + 
Sbjct: 296 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAH 353

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD   VL+R ++E G YP VDPL S SR+ D +    D     + +  ++  ++  +DI 
Sbjct: 354 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDII 413

Query: 391 LIGG 394
            I G
Sbjct: 414 AILG 417


>gi|224532031|ref|ZP_03672663.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           valaisiana VS116]
 gi|224511496|gb|EEF81902.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           valaisiana VS116]
          Length = 434

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    +S  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGVSTSDEIKFLGHSMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPRDGGPSLD--DSLIEIGG--PSANPTKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLVRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ KG  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRAIFFVHTANDSVVESLTVPDISLSVAEKFALKGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G++T +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSVTILTVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ S+  L    +E+ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNNKTRDDHRTIMDSMIKLYASSKESVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|133917162|emb|CAJ33222.1| ATP synthase alpha subunit [Lactobacillus amylovorus]
          Length = 367

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 163/351 (46%), Gaps = 28/351 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + + Q   S+++G +I           +G  + I  GD V   GR    P      GR
Sbjct: 19  GSYGIAQNLESNDVGIII-----------LGQFDNIREGDRVQRTGRIMEVPVGDALIGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG+  + K D +  I +K P  M+RQ V++  +TGI+ ID   P+  GQR 
Sbjct: 68  VVNPLGQPVDGEGEI-KADKTRPIEAKAPGVMDRQSVKQPLQTGIKAIDALVPIGRGQRE 126

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------ 216
            +      GK++L +         D + I + +G++   VR  +E      LK+      
Sbjct: 127 LIIGDRKTGKTSLAIDTILNQKGQDVICIYVAIGQKESTVRTQVE-----TLKRFGAMDY 181

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 182 TIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRP 241

Query: 277 PVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG
Sbjct: 242 PGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDG 301

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E
Sbjct: 302 QIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRE 352


>gi|291534220|emb|CBL07333.1| ATP synthase F1 subcomplex alpha subunit [Megamonas hypermegale
           ART12/1]
          Length = 504

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 163/342 (47%), Gaps = 19/342 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +D  G V+ +  D V    +G   +I  GD+V   G+    P      GRV++ALG+PID
Sbjct: 57  NDIYGMVLNLEQDNVGAVLLGGDTKIKEGDIVKRTGKIMQVPVGESMIGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P   +R+ V++  +TGI+ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIHTTQ-SRPIEYPAPGIADRKSVKEPLQTGIKAIDALVPIGRGQRELIIGDRGTGK 175

Query: 175 S-----TLLSMFARSDCFDKVIISLVGERG----REVREFIEDYLGDNLKKSVVVVATSD 225
           +     T+L+   + +C    I   +G++     R V+ F ED+    +  ++VV AT+ 
Sbjct: 176 TAIAVDTILNQKGQ-NCI--CIYVAIGQKASTIARVVKTF-EDH--GAMDYTIVVAATAS 229

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +S  L+ MAP + VT+ E+F  +G +VL + D +++ A + R ++      P    YP  
Sbjct: 230 DSAPLQYMAPYSGVTMGEHFMYQGKHVLCVYDDLSKHATAYRAMSLLLRRPPGREAYPGD 289

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      E   G+ITA+  +     + +  I  +V SI DG I+L     
Sbjct: 290 VFYLHSRLLERAAKLSDELGGGSITALPIIETLAGDVSGYIPTNVISITDGQIMLQTEAF 349

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             G  P +D   SVSR+   A     K++   +   + ++ E
Sbjct: 350 YSGIRPAIDVGLSVSRVGGSAQIKAMKQIAGRMRLDLAQYRE 391


>gi|291300941|ref|YP_003512219.1| H(+)-transporting two-sector ATPase [Stackebrandtia nassauensis DSM
           44728]
 gi|290570161|gb|ADD43126.1| H(+)-transporting two-sector ATPase [Stackebrandtia nassauensis DSM
           44728]
          Length = 575

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 123/264 (46%), Gaps = 22/264 (8%)

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           NR        TG RV+D+  P+  G    V  G G GK+ LL   A+    D ++    G
Sbjct: 194 NRLEQTAPLHTGQRVLDLLFPVPRGGSAAVPGGFGTGKTVLLQQVAKWCDADVIVYIGCG 253

Query: 197 ERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSK 248
           ERG E+ E + + L       G  L    VV+A +   P++ + A + T +T+AEYF   
Sbjct: 254 ERGNEMAEVVAELLSLTDPRSGGRLADRTVVIANTSNMPMMAREASIHTGMTVAEYFRDM 313

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK---EKG 305
           G +V+LI DS +R+A ++RE A+ + ELP   GYP  + S L    ER G  E      G
Sbjct: 314 GLHVVLIADSTSRWAEALREFASRNRELPAEEGYPAGLASALAAFYERAGVVETLGGRIG 373

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA---- 361
           ++T V +V   G +  +P+       +     L+R LA    YP V    S  R A    
Sbjct: 374 SVTVVGAVSPPGGDLTEPVTAYTERFVRCRWTLDRDLAYARHYPSVSWSGSFCRDAETIG 433

Query: 362 -------DKAWSADEKKLVSSLTH 378
                  D+AW A  ++L + L+ 
Sbjct: 434 AWHAAHGDRAWWARRERLTTVLSE 457


>gi|322835100|ref|YP_004215127.1| ATP synthase F1 subunit alpha [Rahnella sp. Y9602]
 gi|321170301|gb|ADW76000.1| ATP synthase F1, alpha subunit [Rahnella sp. Y9602]
          Length = 513

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 24/335 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVEHDGFSA-VEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  V      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELVIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQY- 400

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             R++     +   +D    K ++    + + LKQ
Sbjct: 401 --RELAAFSQFASDLDEATRKQLNHGQKVTELLKQ 433


>gi|310947804|gb|ADP50721.1| ATP synthase beta chain [Pellaea rotundifolia]
          Length = 370

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 150/303 (49%), Gaps = 24/303 (7%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +        
Sbjct: 59  FGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNISE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++E +DI  
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYKELQDIIA 294

Query: 392 IGG 394
           I G
Sbjct: 295 ILG 297


>gi|310947800|gb|ADP50719.1| ATP synthase beta chain [Pellaea calidirupium]
 gi|310947802|gb|ADP50720.1| ATP synthase beta chain [Pellaea falcata]
          Length = 370

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 150/303 (49%), Gaps = 24/303 (7%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +        
Sbjct: 59  FGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNISE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++E +DI  
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYKELQDIIA 294

Query: 392 IGG 394
           I G
Sbjct: 295 ILG 297


>gi|149798679|gb|ABR32030.1| ATP synthase beta chain [Davallia solida]
          Length = 382

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 27/329 (8%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G +IG+F 
Sbjct: 2   LGEPVDNLGPVQSGT-TFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFG 60

Query: 169 GSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--------KK 216
           G+G+GK+      ++  A++     V   +  ER RE  +   +     +         K
Sbjct: 61  GAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNISESK 119

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 120 VALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGR 179

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 180 MPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDAT 237

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRLIG 393
            VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  I 
Sbjct: 238 TVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIAI- 295

Query: 394 GYRPGVDLILD---KAVHQVPIIYDFLKQ 419
              PG+D + +   + V +   I  FL Q
Sbjct: 296 ---PGLDELSEEDRQTVARARKIERFLSQ 321


>gi|56421895|ref|YP_149213.1| F0F1 ATP synthase subunit alpha [Geobacillus kaustophilus HTA426]
 gi|261420765|ref|YP_003254447.1| F0F1 ATP synthase subunit alpha [Geobacillus sp. Y412MC61]
 gi|297531560|ref|YP_003672835.1| ATP synthase F1 subunit alpha [Geobacillus sp. C56-T3]
 gi|319768435|ref|YP_004133936.1| ATP synthase F1 subunit alpha [Geobacillus sp. Y412MC52]
 gi|81557689|sp|Q5KUJ1|ATPA_GEOKA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56381737|dbj|BAD77645.1| F0F1-type ATP synthasealpha chain [Geobacillus kaustophilus HTA426]
 gi|261377222|gb|ACX79965.1| ATP synthase F1, alpha subunit [Geobacillus sp. Y412MC61]
 gi|297254812|gb|ADI28258.1| ATP synthase F1, alpha subunit [Geobacillus sp. C56-T3]
 gi|317113301|gb|ADU95793.1| ATP synthase F1, alpha subunit [Geobacillus sp. Y412MC52]
          Length = 502

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 150/318 (47%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ IV + P  GI E    GD V   GR    P      GRV+N LG+P+DG   +   +
Sbjct: 70  NVGIVILGPYTGIKE----GDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++ 
Sbjct: 126 -TRPIESPAPGVMDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGAAQIKAMKKVAGTL 382


>gi|306992030|pdb|3OFN|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992031|pdb|3OFN|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992032|pdb|3OFN|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992039|pdb|3OFN|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992040|pdb|3OFN|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992041|pdb|3OFN|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992048|pdb|3OFN|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992049|pdb|3OFN|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992050|pdb|3OFN|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
          Length = 510

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 87  GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 142

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 143 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 202

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 203 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 262

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 263 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 322

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 323 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 382

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 383 KALKQVAGSLKLFLAQYRE 401


>gi|257439243|ref|ZP_05614998.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
 gi|257198285|gb|EEU96569.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
          Length = 584

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 162/351 (46%), Gaps = 18/351 (5%)

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVP 133
           E + +G LV   G R  I     + GRVI+ LG+PIDG     KG ++ E    I  + P
Sbjct: 159 ETVGVGTLVTRSGKRAGIPVGDGFLGRVIDPLGEPIDG-----KGPVNAEGYNPIEKQAP 213

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKVI 191
             + RQ V+    TGI  ID   P+  GQR  +      GK+++ +  +  + D     I
Sbjct: 214 GILERQSVDTPLHTGILAIDSMFPIGRGQRELIIGDRQTGKTSIATDAILNQKDTGVLCI 273

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   +    ED      +  + +V AT+ +S  L+ +AP     +AEYF SKG 
Sbjct: 274 YVAIGQKASSIARVAEDLKKHGAMSYTTIVAATASDSAPLQYIAPYAGTALAEYFMSKGK 333

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G+IT
Sbjct: 334 SVLIVYDDLSKHAVAYRAISLLLRRSPGREAYPGDVFYLHSRLLERSCRMRDDLGGGSIT 393

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  V     + +  I  +V SI DG I L  +L   G  P V+   SVSR+   A +  
Sbjct: 394 ALPIVETQAGDVSAYIPTNVISITDGQIFLESALFNAGNRPAVNVGLSVSRVGGAAQTKA 453

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            KK  S+L   + ++   +D+     +   +D    + +     + + LKQ
Sbjct: 454 MKKANSNLRIELAQY---KDMESFAQFSSDLDAETRRQLEHGKALTEMLKQ 501


>gi|197286887|ref|YP_002152759.1| F0F1 ATP synthase subunit alpha [Proteus mirabilis HI4320]
 gi|227354880|ref|ZP_03839295.1| ATP synthase alpha chain [Proteus mirabilis ATCC 29906]
 gi|226739925|sp|B4F0E5|ATPA_PROMH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|194684374|emb|CAR46018.1| ATP synthase alpha chain [Proteus mirabilis HI4320]
 gi|227165033|gb|EEI49869.1| ATP synthase alpha chain [Proteus mirabilis ATCC 29906]
          Length = 513

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 26/336 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGAVEHDGFSPVEMIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L+ 
Sbjct: 163 QRELIIGDRQTGKTALAVDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALEN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERAARVSAEYVENFTNGEVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQY 400

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +   +D    K ++    + + LKQ
Sbjct: 401 ---RELAAFSQFASDLDDATRKQLNHGQKVTELLKQ 433


>gi|291531906|emb|CBK97491.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium siraeum 70/3]
          Length = 501

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 161/346 (46%), Gaps = 11/346 (3%)

Query: 57  DNLGQVIRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           +N  + + +NL+  ++  V +G   EI  GD V   G     P      GRV+NALG+PI
Sbjct: 56  ENGVRCMALNLEQDFVGAVMLGSDAEIKEGDTVKRTGSVVSVPVGEELLGRVVNALGQPI 115

Query: 114 DGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           DG  + L K    +E ++  P  + R+ V    +TGI+ ID   P+  GQR  +      
Sbjct: 116 DGKGAILAKETRPIEKIA--PGIITRKSVNVPLQTGIKAIDSMIPIGRGQRELIIGDRQT 173

Query: 173 GKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           GK+ + +         D + I + +G++   V   +E       +  ++VV AT+ E   
Sbjct: 174 GKTAIAIDTIINQKKTDVICIYVAIGQKASTVANVVEQLTAAGAMDYTIVVSATASELAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  KG + L+I D +++ A + R ++      P    YP  VF  
Sbjct: 234 LQYIAPYSGCTMGEYFMEKGKDALIIYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER     ++   G++TA+  +     + +  I  +V SI DG I L   L   G 
Sbjct: 294 HSRLLERAANLNEDYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGV 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            P V+P  SVSR+   A     KK+  +L     +F E +     G
Sbjct: 354 RPAVNPGISVSRVGGNAQIKAMKKVSGTLKLEYSQFRELQSFSQFG 399


>gi|310947806|gb|ADP50722.1| ATP synthase beta chain [Pteris comans]
 gi|310947808|gb|ADP50723.1| ATP synthase beta chain [Pteris macilenta]
 gi|310947810|gb|ADP50724.1| ATP synthase beta chain [Pteris saxatilis]
          Length = 370

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 151/303 (49%), Gaps = 24/303 (7%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVQNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNLK--- 215
           F G+G+GK+ L+    +  A++     V   +  ER RE      E  E  + +  K   
Sbjct: 59  FGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQKISE 117

Query: 216 -KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E +DI  
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQDIIA 294

Query: 392 IGG 394
           I G
Sbjct: 295 ILG 297


>gi|302849326|ref|XP_002956193.1| hypothetical protein VOLCADRAFT_110003 [Volvox carteri f.
           nagariensis]
 gi|300258496|gb|EFJ42732.1| hypothetical protein VOLCADRAFT_110003 [Volvox carteri f.
           nagariensis]
          Length = 504

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 28/288 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N  GKPIDG   +   +  ++I         R   E+  +TGI  ID+   +  GQ
Sbjct: 114 GRVFNGSGKPIDGGPPI-LAEAFLDITGASINPAERTYPEEMIQTGISTIDVMNSIARGQ 172

Query: 163 RIGVFAGSGIGKSTLLSMFARS------------------------DCFDKVIISLVGER 198
           +I +F+ +G+  + + +   R                         D F  ++ + +G  
Sbjct: 173 KIPLFSAAGLPHNDIAAQICRQAGLVKLPAGQKKHSHGHGAEGEEEDSF-AIVFAAMGVN 231

Query: 199 GREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
                 F +D+  + +L+++V+ +  +++  I R + P  A+T AEY + + G +VL+IL
Sbjct: 232 METAHFFKQDFEENGSLERTVLFLNLANDPTIERIITPRIALTTAEYLAYECGYHVLVIL 291

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
             ++ +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + + 
Sbjct: 292 TDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTMP 351

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            D+   PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 352 NDDITHPIPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 399


>gi|159487671|ref|XP_001701846.1| vacuolar ATP synthase subunit B [Chlamydomonas reinhardtii]
 gi|158281065|gb|EDP06821.1| vacuolar ATP synthase subunit B [Chlamydomonas reinhardtii]
          Length = 504

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 27/288 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N  GKPIDG   +          + + PA  R   E+  +TGI  ID+   +  GQ
Sbjct: 113 GRVFNGSGKPIDGGPPILAEQFLDITGASINPA-ERTYPEEMIQTGISTIDVMNSIARGQ 171

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK------------------------VIISLVGER 198
           +I +F+ +G+  + + +   R     K                        ++ + +G  
Sbjct: 172 KIPLFSAAGLPHNDIAAQICRQAGLVKLPAGQKKHGHAGGHGDEDGGDSFAIVFAAMGVN 231

Query: 199 GREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
                 F +D+  + +L+++V+ +  +++  I R + P  A+T AEY + + G +VL+IL
Sbjct: 232 METAHFFKQDFEENGSLERTVLFLNLANDPTIERIITPRIALTTAEYLAYECGYHVLVIL 291

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
             ++ +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + + 
Sbjct: 292 TDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQLPILTMP 351

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            D+   PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 352 NDDITHPIPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 399


>gi|254580783|ref|XP_002496377.1| ZYRO0C16984p [Zygosaccharomyces rouxii]
 gi|238939268|emb|CAR27444.1| ZYRO0C16984p [Zygosaccharomyces rouxii]
          Length = 517

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 157/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  IV +     G ++    + F     RI  S    GR+ +  G+P+D   
Sbjct: 65  GQVLEVRGDRAIVQVFEGTSGIDVKKTCVDFTGESLRIPVSEDLLGRIFDGSGRPVDNGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R   E+   TG+  ID    +  GQ+I +F+ SG+  + +
Sbjct: 125 RVFAEDY-LDINGSPINPYSRIYPEEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEI 183

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 184 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 243

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 244 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 303

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  L ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 304 YPGYMYTDLATLYERAGRVEGRNGSITQIPILSMPNDDITHPIPDLTGYITEGQIFVDRQ 363

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 364 LNNKGIYPPINVLPSLSRLMKSA 386


>gi|224830488|gb|ACN66339.1| ATP synthase beta chain [Borismene japurensis]
          Length = 489

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 19/265 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 143 FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 202

Query: 205 FIEDYLGDNLKKS-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             + Y+   +K+S              +V    +E P  R    LTA+T+AEYF    + 
Sbjct: 203 GNDLYM--EMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 260

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++
Sbjct: 261 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSI 318

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S  L  +    + 
Sbjct: 319 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEH 378

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGG 394
            +    +     R++E +DI  I G
Sbjct: 379 YETAQRVKQTSQRYKELQDIIAILG 403


>gi|319650869|ref|ZP_08005006.1| F0F1 ATP synthase subunit alpha [Bacillus sp. 2_A_57_CT2]
 gi|317397467|gb|EFV78168.1| F0F1 ATP synthase subunit alpha [Bacillus sp. 2_A_57_CT2]
          Length = 502

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 10/326 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P     EI  GD V   GR    P      GRV+N LG+P+DG   +     
Sbjct: 70  NVGIIILGPF---TEIREGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVDGMGPINTTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++  
Sbjct: 126 SRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   VT+
Sbjct: 186 QKDQDMVCIYVAIGQKESTVRNAVETLRKQGALDYTIVVTASASQPAPLLYLAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-- 299
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMYNGKHVLVVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 305

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             K  G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DAKGAGSITALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEE 385
           +   A     KK+  +L   +  + E
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRE 391


>gi|119389904|pdb|2HLD|A Chain A, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389905|pdb|2HLD|B Chain B, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389906|pdb|2HLD|C Chain C, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389913|pdb|2HLD|J Chain J, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389914|pdb|2HLD|K Chain K, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389915|pdb|2HLD|L Chain L, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389922|pdb|2HLD|S Chain S, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389923|pdb|2HLD|T Chain T, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389924|pdb|2HLD|U Chain U, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|224510808|pdb|3FKS|A Chain A, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510809|pdb|3FKS|B Chain B, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510810|pdb|3FKS|C Chain C, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510817|pdb|3FKS|J Chain J, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510818|pdb|3FKS|K Chain K, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510819|pdb|3FKS|L Chain L, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510826|pdb|3FKS|S Chain S, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510827|pdb|3FKS|T Chain T, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510828|pdb|3FKS|U Chain U, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|300193115|pdb|2WPD|A Chain A, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193116|pdb|2WPD|B Chain B, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193117|pdb|2WPD|C Chain C, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|306991949|pdb|3OE7|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991950|pdb|3OE7|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991951|pdb|3OE7|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991958|pdb|3OE7|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991959|pdb|3OE7|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991960|pdb|3OE7|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991967|pdb|3OE7|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991968|pdb|3OE7|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991969|pdb|3OE7|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306992003|pdb|3OEH|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992004|pdb|3OEH|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992005|pdb|3OEH|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992012|pdb|3OEH|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992013|pdb|3OEH|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992014|pdb|3OEH|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992021|pdb|3OEH|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992022|pdb|3OEH|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992023|pdb|3OEH|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
          Length = 510

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 87  GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 142

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 143 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 202

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 203 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 262

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 263 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 322

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 323 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 382

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 383 KALKQVAGSLKLFLAQYRE 401


>gi|318042274|ref|ZP_07974230.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CB0101]
          Length = 505

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 153/339 (45%), Gaps = 26/339 (7%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDG 115
           DN+G V+           +G G  I  G  V   G+    P      GRV+N LG PIDG
Sbjct: 70  DNVGAVL-----------MGEGRGIQEGSTVKATGKIASVPVGDAMLGRVVNPLGLPIDG 118

Query: 116 DDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
                KGD++      I S  P  + R+ V +  +TGI  ID   P+  GQR  +     
Sbjct: 119 -----KGDIATSETRLIESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQ 173

Query: 172 IGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
            GK+ + +         D V + + VG++   V   +E       L  ++VV A + ES 
Sbjct: 174 TGKTAIAIDTIINQKGEDVVCVYVAVGQKAASVANVVEVLREKGALDYTIVVAANASESA 233

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP T   IAE F  KG   L+I D +T+ A + R+++      P    YP  VF 
Sbjct: 234 ALQYLAPYTGAAIAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFY 293

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER         KG++TA+  +     + +  I  +V SI DG + L+  L   G
Sbjct: 294 CHSRLLERAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSG 353

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             P ++   SVSR+   A +   KK+  +L   + +F+E
Sbjct: 354 LRPAINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|123325711|gb|ABM74480.1| ATP synthase beta subunit [Paramignya lobata]
          Length = 466

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 152/306 (49%), Gaps = 20/306 (6%)

Query: 104 RVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           R+   LG+P+D   +LG  D   +  I    P  +        F+TGI+V  +  P   G
Sbjct: 90  RIXXVLGEPVD---NLGPVDTRTTSPIHXSXPAFIXLDTRLSIFETGIKVXXLLAPYRRG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GD 212
            +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           
Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQ 206

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E+
Sbjct: 207 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 266

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 267 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 324

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388
           + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +D
Sbjct: 325 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQD 384

Query: 389 IRLIGG 394
           I  I G
Sbjct: 385 IIAILG 390


>gi|3023345|sp|O03075|ATPB_MICSZ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1934708|gb|AAB51741.1| ATP synthase beta chain [Microlepia szechuanica]
          Length = 473

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 150/307 (48%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR+ N LG+P+D    + + +    I    P           F+TGI+V D+  P   G
Sbjct: 107 LGRISNVLGEPVDNPGPV-RSNTIFPIHRSAPAFTQLDTKLSIFETGIKVADLLAPYRRG 165

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+  G+G+GK+ L+ +   +       +S+ G  G   RE  + Y+           
Sbjct: 166 GKIGLSGGAGVGKTVLIMVLINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 225

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P        TA T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 226 NISESKVALVYGQMNEPPGASMRVGSTASTMAEYFRDVNKQDVLLFIDNILRFVQAGSEV 285

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP   +  
Sbjct: 286 SALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAPATTS 343

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +   + R++E +
Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTLQRYKELQ 402

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 403 DIIAILG 409


>gi|310659617|ref|YP_003937338.1| v-type ATP synthase alpha chain (v-type ATPase subunit a)
           [Clostridium sticklandii DSM 519]
 gi|308826395|emb|CBH22433.1| V-type ATP synthase alpha chain (V-type ATPase subunit A)
           [Clostridium sticklandii]
          Length = 594

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 22/324 (6%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P   R  +++   TG RV+DIF P+  G    +  G G GK+      A+    D ++  
Sbjct: 200 PVKERMAIDRLLITGQRVLDIFFPIAKGGTAALPGGFGTGKTMTQHQLAKWSDADIIVYI 259

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ E +ED+        G  L +  +++A +   P+  + A + T +T+AEYF
Sbjct: 260 GCGERGNEITEVLEDFPKLIDPRSGKPLMERTILIANTSNMPVAAREASIYTGITMAEYF 319

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG---PSEK 302
              G +V ++ DS +R+A ++REI+    E+P   GYP  + S L +  ER G       
Sbjct: 320 RDMGYHVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRLAQFYERAGFVRSLSG 379

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G++T + +V   G + ++P+ ++ +  ++  + L+R LA    YP +  L S S  + 
Sbjct: 380 VEGSVTIIGAVSPPGGDFSEPVTENTKRFVNAFLALDRKLAYARHYPAIGYLTSYSGYSK 439

Query: 363 --KAW-----SADEKKLVSSLTHLIHRFEETRDI-RLIGGYRPGVDLILDKAVHQVPIIY 414
             + W     S D  ++   +  ++H  E+   I +L+G      D  L   + +V I  
Sbjct: 440 SLRNWYYENVSEDVLEIREKMLFILHEEEKLNSIVQLVGEDVLPDDQRLTLEIAKV-IKR 498

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FL+Q+   +  +D F  I K+ +
Sbjct: 499 GFLQQNA--MHKDDTFVPILKQYE 520


>gi|323388529|gb|ADX60550.1| ATP synthase beta subunit [Talisia nervosa]
          Length = 318

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+      G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 11  FETGIKVVDLLXXYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 70

Query: 205 FIEDYL---------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 71  GNDLYMEMKESGVINQQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 130

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 131 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 188

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 189 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 248

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 249 TAQRVKQTLQRYKELQDIIAILG 271


>gi|223931089|ref|YP_002586951.1| ATP synthase CF1 alpha subunit [Syntrichia ruralis]
 gi|219562303|gb|ACL27634.1| ATP synthase CF1 alpha subunit [Syntrichia ruralis]
          Length = 507

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 190/417 (45%), Gaps = 15/417 (3%)

Query: 13  EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           EDYS+ + VV  G +  +      +  L + V  G+ V  +     ++G  + +  D V 
Sbjct: 18  EDYSQEIKVVNVGTVLQVGDGIARIYGLDK-VMAGELVEFE---DSSIGIALNLESDNVG 73

Query: 72  ICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +  + I S
Sbjct: 74  VVLMGDGLTIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISASEFRL-IES 132

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +     V
Sbjct: 133 SAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNV 192

Query: 191 IISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSS 247
           I   V  G++   V + + ++      +  +VVA +  SP  L+ +AP T   +AEYF  
Sbjct: 193 ICVYVAIGQKASSVAQVVNNFEERGALEYTIVVAETANSPATLQYLAPYTGAALAEYFMY 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKG 305
           +  + L+I D +++ A + R+++      P    YP  VF    RLLER     S+  +G
Sbjct: 253 RKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEG 312

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A 
Sbjct: 313 SMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQ 372

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
               K++   L   + +F E   +     +   +D      + +   + + LKQS S
Sbjct: 373 IKAMKQVAGKLKLELAQFAE---LEAFAQFASDLDKATQNQLARGQRLRELLKQSQS 426


>gi|284007075|emb|CBA72350.1| F0F1 ATP synthase subunit alpha [Arsenophonus nasoniae]
          Length = 516

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 32/339 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG +  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 108 GRVVNTLGEPIDG-----KGPVEHDGFSAVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPI 162

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    
Sbjct: 163 GRGQRELIIGDRQTGKTALAVDAIINQRDSEIKCIYVAIGQKASTIANVVRKLEEH--GA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+ ++VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 221 LENTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 280

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    YP  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 281 RRPPGREAYPGDVFYLHSRLLERAARVNAEYVEKFTNGEIKGKTGSLTALPIIETQAGDV 340

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 341 SAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTAL 400

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            ++   R++     +   +D    K ++    + + LKQ
Sbjct: 401 AQY---RELAAFSQFASDLDDATRKQLNHGQKVTELLKQ 436


>gi|133917166|emb|CAJ33224.1| ATP synthase alpha subunit [Lactobacillus crispatus]
          Length = 324

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 17/313 (5%)

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG+  + K D +  I +K P  M+RQ V+
Sbjct: 2   GDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGEGEI-KADKTRPIEAKAPGVMDRQSVK 60

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + +G++  
Sbjct: 61  QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQDVICIYVAIGQKES 120

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 121 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLI 175

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER    SEK   G++TA+  
Sbjct: 176 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLSEKLGGGSLTALPI 235

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 236 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 295

Query: 373 VSSLTHLIHRFEE 385
             +L   +  + E
Sbjct: 296 AGTLRTDLAAYRE 308


>gi|158340806|ref|YP_001521974.1| F0F1 ATP synthase subunit alpha [Acaryochloris marina MBIC11017]
 gi|190358149|sp|A8ZNS4|ATPA2_ACAM1 RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|158311047|gb|ABW32660.1| ATP synthase F1, alpha subunit [Acaryochloris marina MBIC11017]
          Length = 513

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 153/335 (45%), Gaps = 7/335 (2%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
           D +G    ++ D V +  +  G  +  G  V   GR    P      GRV++A G+P+D 
Sbjct: 66  DRMGLAFNLDPDEVGLILLDDGHSLKAGCEVQRTGRVLDVPVGEGLLGRVVDATGRPLD- 124

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L        +  + P  M+R  V    +TGI+ ID   P+  GQR  +      GK+
Sbjct: 125 QRGLVTAQERRPVEREAPAIMDRAPVTVPLQTGIKAIDALIPIGRGQRELIVGDRQTGKT 184

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
            +   ++  + D     +   +G+R   V + I +      +   +VVVA  + SP L+ 
Sbjct: 185 AIAVDTILNQKDQDVICVYCAIGQRSSAVAKLIAELRNRGAMDYCIVVVAEGEASPGLQY 244

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           + P  A T+AEYF  +G +VL++ D + + A + RE++      P    +P  +F    R
Sbjct: 245 ITPYAATTMAEYFMEQGQDVLIVYDDLIQHARAYRELSLLLRRPPGREAFPGDIFYIHAR 304

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  V  +  N +  I  ++ SI DG I L   L ++G +P 
Sbjct: 305 LLERATCLRPELGGGSLTALPIVETEAQNLSAYIPTNLVSITDGQIYLTPDLFQKGIFPA 364

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VD   SVSR+  KA     + +   L     +FEE
Sbjct: 365 VDVGKSVSRVGGKAQLPAYRDVAGDLRLSYTQFEE 399


>gi|325981214|ref|YP_004293616.1| ATP synthase F1, alpha subunit [Nitrosomonas sp. AL212]
 gi|325530733|gb|ADZ25454.1| ATP synthase F1, alpha subunit [Nitrosomonas sp. AL212]
          Length = 513

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 200/442 (45%), Gaps = 43/442 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K +E LA  AE  ++      G I S+T     +  LS  V  G+ +   G   +  G
Sbjct: 12  IKKRIEGLADTAEIRTQ------GTIVSVTDGIVRIHGLSD-VMQGEMLEFPG---NTFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V    +G  E I  GD V   GR    P      GRV+NALG+PIDG    
Sbjct: 62  LALNLERDSVGAVIMGAYEHIREGDTVKCTGRILEVPVGEGLLGRVVNALGQPIDG---- 117

Query: 120 GKGDLSM---EIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG ++    E + K+ P  + RQ V++  +TG++ +D   P+  GQR  +      GK+
Sbjct: 118 -KGPVTAARSEPIEKIAPGVIWRQSVDQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKT 176

Query: 176 TL-LSMFARSDCFDKVIISL-VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPIL 230
            + +         D + I + VG++   +   +   E++    ++ ++VV AT+ ES  +
Sbjct: 177 AVAIDAILNQKGQDMLCIYVAVGQKASSIANVVRKLEEH--GAMEYTIVVAATASESAAM 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +  T+ EYF  KG + L++ D +T+ A + R+I+      P    YP  VF   
Sbjct: 235 QFIAPYSGCTMGEYFRDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLH 294

Query: 291 PRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            RLLER              G  + + G++TA+  +     +    +  +V SI DG I 
Sbjct: 295 SRLLERAARVSAAYVEKATNGAVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIF 354

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L   G  P ++   SVSR+   A +   KKL   +   + ++   R++     +  
Sbjct: 355 LETDLFNAGIRPAINAGVSVSRVGGAAQTKVIKKLGGGIRLALAQY---RELAAFAQFAS 411

Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419
            +D    K + +  +  + +KQ
Sbjct: 412 DLDEATRKQLERGKMATELMKQ 433


>gi|261346705|ref|ZP_05974349.1| ATP synthase F1, alpha subunit [Providencia rustigianii DSM 4541]
 gi|282565105|gb|EFB70640.1| ATP synthase F1, alpha subunit [Providencia rustigianii DSM 4541]
          Length = 513

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  + RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGPVEHDGFSPVEVIA--PGVIERQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L+ 
Sbjct: 163 QRELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALEN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|195183522|dbj|BAG66974.1| ATP synthase beta subunit [Melicytus micranthus]
          Length = 489

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 156/311 (50%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D  +  ++ +   A  +   +   F+ GI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---DLGPVDTRTTSLIHRSMLAFVQLETKLLIFEIGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
              HG +IG+  G+G+GK+ L++    +       +S+ G       E  + YL      
Sbjct: 153 LHRHGGKIGLSGGAGVGKTILINELINNITKAHEGVSVFGGVSECTLEGNDLYLKMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ KS V  V    +E    R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VIIEENIAKSKVGLVYGQMNELSGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  ++   +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYEIAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|304407762|ref|ZP_07389413.1| ATP synthase F1, alpha subunit [Paenibacillus curdlanolyticus YK9]
 gi|304343245|gb|EFM09088.1| ATP synthase F1, alpha subunit [Paenibacillus curdlanolyticus YK9]
          Length = 504

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 154/333 (46%), Gaps = 7/333 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G  + +    V +  +G  + I  GD V   GR    P      GRV+NALG+P+DG+ 
Sbjct: 60  IGMALNLEESNVGVVIMGQYKGIREGDQVKRTGRIMEVPVGEALLGRVVNALGEPVDGNG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +     +  I S  P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 PINT-TATRPIESPAPGVMARKSVFEPMQTGIKAIDAMIPVGRGQRELIIGDRQTGKTQI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
              ++  +       I   +G++   VR  +E       L  ++VV A++ E   L  +A
Sbjct: 179 AIDTIVNQKGNGVICIYVAIGQKQSTVRTVVESLRKQGALDYTIVVTASASEPSPLLYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T  ++ EYF   G +VL++ D +++ A + RE++      P    YP  VF    RLL
Sbjct: 239 PYTGCSMGEYFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P V+
Sbjct: 299 ERAAKLNDELGGGSLTALPFIETQAGDISAYIPTNVISITDGQIFLESDLFYSGQRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A     KK+  +L   + ++ E
Sbjct: 359 VGNSVSRVGSSAQIKAMKKVAGTLKTDLAQYRE 391


>gi|28211923|ref|NP_782867.1| V-type ATP synthase subunit A [Clostridium tetani E88]
 gi|75541770|sp|Q891P1|VATA2_CLOTE RecName: Full=V-type ATP synthase alpha chain 2; AltName:
           Full=V-ATPase subunit A 2
 gi|28204366|gb|AAO36804.1| V-type sodium ATP synthase subunit A [Clostridium tetani E88]
          Length = 592

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 11/237 (4%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P  NR  + K   TG R++D+F P+  G  + +  G G GK+      A+    D ++  
Sbjct: 203 PIKNRLSLGKPLITGQRILDMFFPIAKGGTVAIPGGFGTGKTMTQHQLAKWSDADIIVYI 262

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ E +ED+          +L    V++A +   P+  + A + T +TIAEY+
Sbjct: 263 GCGERGNEMTEVLEDFPKLIDPKTNTSLMNRTVLIANTSNMPVAAREASIYTGITIAEYY 322

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302
              G +V ++ DS +R+A ++REI+    E+P   GYP  + S +    ER G  E    
Sbjct: 323 RDMGYDVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAEFYERAGYVENLND 382

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +G++T + +V   G + ++P+  + +  +   + L+R LA    YP ++ L S S+
Sbjct: 383 TEGSVTVIGAVSPAGADFSEPVTQNTKRFVGAFLGLDRKLAYARHYPAINWLTSYSQ 439


>gi|38233644|ref|NP_939411.1| F0F1 ATP synthase subunit alpha [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564887|sp|Q6NHT1|ATPA_CORDI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|38199904|emb|CAE49570.1| ATP synthase alpha chain [Corynebacterium diphtheriae]
          Length = 542

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 180/387 (46%), Gaps = 33/387 (8%)

Query: 50  VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
           V Q  ++D +G V+  N +I           +  GD V   G    I     + GRVIN 
Sbjct: 65  VAQNLDTDRIGVVVLGNYEI-----------LKEGDEVKRTGEVLSIPVGEKFLGRVINP 113

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PIDG  ++ + +    +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +  
Sbjct: 114 LGQPIDGLGAI-EAEEQRVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIG 172

Query: 169 GSGIGKS-----TLLSMFARSDCFDK-----VIISLVGERGR---EVREFIEDYLGDNLK 215
               GK+     T+L+  A  +  DK      I   VG++G     VR+ +E++    L+
Sbjct: 173 DRKTGKTAVCIDTILNQKANWESGDKSKQVRCIYVAVGQKGSTIAAVRQTLEEH--GALE 230

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            + +V A + +S   + +AP     + +++  +G++VL+I D +T+ A + R I+     
Sbjct: 231 YTTIVAAPASDSAGFKWLAPFAGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRR 290

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILD 333
            P    YP  VF    RLLER      +   G++TA+  +    ++ +  I  +V SI D
Sbjct: 291 PPGREAYPGDVFYLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITD 350

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G + L   L  +G  P ++   SVSR+   A +   KK+  SL   +  +   RD+    
Sbjct: 351 GQVFLESDLFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFA 407

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +D      + +   + + LKQ+
Sbjct: 408 TFASDLDAASKAQLDRGARLVELLKQA 434


>gi|270158070|ref|ZP_06186727.1| V-type ATP synthase alpha chain [Legionella longbeachae D-4968]
 gi|289163665|ref|YP_003453803.1| V-type ATP synthase alpha chain 1 (V-type ATPase subunit A 1)
           [Legionella longbeachae NSW150]
 gi|269990095|gb|EEZ96349.1| V-type ATP synthase alpha chain [Legionella longbeachae D-4968]
 gi|288856838|emb|CBJ10649.1| V-type ATP synthase alpha chain 1 (V-type ATPase subunit A 1)
           [Legionella longbeachae NSW150]
          Length = 603

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 146/297 (49%), Gaps = 22/297 (7%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           T +R+ID F P+  G    +    G GK+ L ++ AR    D VII   GER  EV E I
Sbjct: 238 TTLRLIDTFFPIARGGTACIPGPFGAGKTVLQNLIARYSDVDIVIIVACGERAGEVVETI 297

Query: 207 EDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNVLLILDS 258
            ++       +G  L    ++V  +   P+  + A + T +T+ EY+   G NVLLI DS
Sbjct: 298 TEFPNLVDPKMGGTLMDRTIIVCNTSSMPVAAREASIYTGITLGEYYRQMGFNVLLIADS 357

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG---PSEKEKGNITAVISVLV 315
            +R+A ++RE +    E+P   G+P  + S +  L ER G     +++ G++T V +V  
Sbjct: 358 TSRWAQAMRETSGRMEEIPGEEGFPAYLDSSIRGLYERAGIVRCCDQKIGSLTIVGTVSP 417

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--- 372
            G N  +P+  S  + +   + L+   A +  YP VDPL S SR  ++     E  L   
Sbjct: 418 AGGNFEEPVTQSTLNAVKTFLGLSYDRAYKRFYPAVDPLISWSRYFEQLKPWFESNLEPM 477

Query: 373 ----VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD--FLKQSPSD 423
               V  +T L+H+ +E  ++  + G   G+ +  D   +Q  +++D  +L+Q   D
Sbjct: 478 WITKVMEITKLLHQGQEIFNMMQVTG-EEGITM-RDYISYQKSLLFDMTYLQQDAYD 532


>gi|253987521|ref|YP_003038877.1| F0F1 ATP synthase subunit alpha [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253778971|emb|CAQ82131.1| ATP synthase subunit alpha [Photorhabdus asymbiotica]
          Length = 513

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 148/305 (48%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG +  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGEPIDG-----KGPVEHDGFSAVEMIAPGVIDRQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K +   VG++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVAT+ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNAEYVEKFTNGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIVKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|149384819|gb|ABR25218.1| ATP synthase beta chain [Pronephrium simplex]
          Length = 426

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 151/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESRV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V   +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPSFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +  V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAAYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|113910924|gb|ABI48194.1| ATPase beta subunit [Todea barbara]
          Length = 447

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N  G+P+D   +LG  D S    I    P +         F+TGI+V+D+  P   
Sbjct: 68  GRISNVPGEPVD---NLGPVDTSTTSPIHRSAPASTQLDTKLSIFETGIKVVDLSAPYRR 124

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+F G+G+GK+  +    +  A++     V   +  ER RE  +   +     +  
Sbjct: 125 GGKIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 183

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 184 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 243

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 244 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPVDDSTDPAPAT 301

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             +  D   VL R LA +G YP VDPL S   +  + W   E+  +    +   + R++E
Sbjct: 302 TFAHXDATTVLPRGLAAKGIYPAVDPLDSTPTML-QPWIVGEEHYETAQGVKQTLQRYKE 360

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 361 PQDIIAILG 369


>gi|33865030|ref|NP_896589.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. WH 8102]
 gi|81712315|sp|Q7U8W5|ATPA_SYNPX RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33638714|emb|CAE07009.1| ATP synthase subunit alpha [Synechococcus sp. WH 8102]
          Length = 506

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 11/332 (3%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE + +  G  V   G+    P      GRV+N+LG+ IDG   +
Sbjct: 63  IALNLEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGEAMLGRVVNSLGRAIDGKGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              +  + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +  
Sbjct: 123 ATSETRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAI 181

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAP 235
            ++  + D     +   VG++   V   +E  L +   L  SV+V A + E   L+ +AP
Sbjct: 182 DTILNQKDQDMICVYVAVGQKAASVANVVE-VLRERGALDYSVIVAANASEPAALQYLAP 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T  +IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLE
Sbjct: 241 YTGASIAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHSRLLE 300

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R         KG++TA+  +     + +  I  +V SI DG I L+  L   G  P ++ 
Sbjct: 301 RAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINV 360

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+   A +   KK+  +L   + +F E
Sbjct: 361 GISVSRVGGAAQTKAIKKIAGTLKLELAQFAE 392


>gi|328681681|gb|AEB32913.1| ATP synthase beta subunit [Lepidozia trichodes]
          Length = 354

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 138/265 (52%), Gaps = 19/265 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F T I+V+D+  P   G +IG F G+G+GK+ L+    +  A++     V      ER R
Sbjct: 15  FXTAIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGXG-ERTR 73

Query: 201 E----VREFIEDYLGD--NLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
           E      E  E  + D  N+ +S V +     +E P  R    LTA+T+AEYF      +
Sbjct: 74  EGNDLYMEMKESKVIDEQNISESKVALXYGQMNEPPGARMRVGLTALTMAEYFRDXNKQD 133

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ 
Sbjct: 134 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQ 191

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+ 
Sbjct: 192 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEH 250

Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394
            +    +   + R++E +DI  I G
Sbjct: 251 YETAQGVKQTLQRYKELQDIIAILG 275


>gi|306991976|pdb|3OEE|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991977|pdb|3OEE|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991978|pdb|3OEE|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991985|pdb|3OEE|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991986|pdb|3OEE|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991987|pdb|3OEE|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991994|pdb|3OEE|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991995|pdb|3OEE|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991996|pdb|3OEE|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
          Length = 510

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 87  GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 142

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 143 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 202

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 203 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 262

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 263 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 322

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 323 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 382

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 383 KALKQVAGSLKLFLAQYRE 401


>gi|227524279|ref|ZP_03954328.1| F0F1 ATP synthase subunit alpha [Lactobacillus hilgardii ATCC 8290]
 gi|227088510|gb|EEI23822.1| F0F1 ATP synthase subunit alpha [Lactobacillus hilgardii ATCC 8290]
          Length = 522

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 9/342 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
            G V  +  + V I  +G    I  GD V   GR    P      GRV+N+LG+PIDG  
Sbjct: 60  FGMVQNLEANDVGIMVLGDDTNIREGDSVKRTGRIMEVPVGDDMIGRVVNSLGQPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K D    I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++
Sbjct: 120 PI-KADDHKAIEHKAPGVMDRKSVFEPLQTGIKSIDSLIPIGRGQRELIIGDRKTGKTSI 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKM 233
              ++  +     K I   +G++   VR  +   +  G  +  + V+ A   E   L  +
Sbjct: 179 AIDTILNQKGQNMKCIYVAIGQKESTVRASVSTLEKFG-AMDYTTVISAGPSEPASLLYI 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  KG +VL++ D +++ A++ RE++      P    YP  +F    RL
Sbjct: 238 APYAGATMGEYFMHKGQHVLIVYDDLSKQANAYRELSLILRRPPGREAYPGDIFYTHSRL 297

Query: 294 LERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER    S+K   G++TA+  V     + +  I  +V SI DG I L+      G  P V
Sbjct: 298 LERAAKLSDKLGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAV 357

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           D   SVSR+   A     KK+  +L   +  + E       G
Sbjct: 358 DAGTSVSRVGGDAQVKAMKKVAGTLRLDLASYHELESFAQFG 399


>gi|25808413|gb|AAN74333.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808483|gb|AAN74368.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808499|gb|AAN74376.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|37524074|ref|NP_927418.1| F0F1 ATP synthase subunit alpha [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81572786|sp|Q7NA92|ATPA_PHOLL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|36783497|emb|CAE12337.1| ATP synthase alpha chain [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 513

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 148/305 (48%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG +  +  S V    P  ++RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGEPIDG-----KGPVEHDGFSAVEMIAPGVIDRQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K +   VG++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVAT+ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNAEYVEKFTNGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIVKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|20467349|gb|AAL27805.1| ATPase beta subunit [Cycas revoluta]
          Length = 382

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 156/316 (49%), Gaps = 30/316 (9%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N +G+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 66  GATLGRIFNVIGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 122

Query: 157 PLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI------ 206
           P   G +IG+F G+G+GK+     L++  A++     V   +  ER RE  +        
Sbjct: 123 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKES 181

Query: 207 -----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSIT 260
                +D  G    K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I 
Sbjct: 182 GVINEQDISG---SKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIF 238

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +  V  D+ 
Sbjct: 239 RFVQAGSEVSALLGRMPSAVGYXPTLSTEMGSLQERI--TSTKEGSITSIQAXYVPADDL 296

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTH 378
            DP   +  + L+   VL+R LA +G YP V+ L S S +  + W   E+  +    +  
Sbjct: 297 TDPAPATTFAHLNATTVLSRGLAAKGIYPAVNXLDSTSTML-QPWIVGEEHYETAQGVKP 355

Query: 379 LIHRFEETRDIRLIGG 394
            + R++E +DI  I G
Sbjct: 356 TLQRYKELQDIIXILG 371


>gi|187731460|ref|YP_001882429.1| F0F1 ATP synthase subunit alpha [Shigella boydii CDC 3083-94]
 gi|301020862|ref|ZP_07184923.1| ATP synthase F1, alpha subunit [Escherichia coli MS 69-1]
 gi|226739941|sp|B2TUP1|ATPA_SHIB3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|187428452|gb|ACD07726.1| ATP synthase F1, alpha subunit [Shigella boydii CDC 3083-94]
 gi|300398432|gb|EFJ81970.1| ATP synthase F1, alpha subunit [Escherichia coli MS 69-1]
          Length = 513

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLDHDGFSA-VEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKNGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|20269394|gb|AAM17924.1| ATP synthase beta subunit [Ficalhoa laurifolia]
          Length = 373

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 158/311 (50%), Gaps = 26/311 (8%)

Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P D   +LG  D   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 66  LGRIFNVLGEPAD---NLGPVDTRTTSPIHRSAPAFIXLDTKLSIFETGIKVVDLLAPYR 122

Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE-------VREF--- 205
            G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE       ++EF   
Sbjct: 123 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKEFGVI 181

Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
            E  + ++  K  +V    +E P       LTA+T+AEYF    + +VLL +D+I  F  
Sbjct: 182 NEQNIAES--KVALVYGQMNEPPGAHMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQ 239

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +  A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  ++  DP 
Sbjct: 240 AGSEVSALLGXMLSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPANDLTDPA 297

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YPPVDPL ++++ L  +    +  +    +   + R+
Sbjct: 298 PATTFAHLDATTVLSRGLAAKGIYPPVDPLDSTLTMLQPRIVGEEHYETAPRVKQTLQRY 357

Query: 384 EETRDIRLIGG 394
           +E  DI  I G
Sbjct: 358 KELXDIIAILG 368


>gi|25808481|gb|AAN74367.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|30959120|gb|AAO73319.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNSIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|25808415|gb|AAN74334.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808417|gb|AAN74335.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|15639418|ref|NP_218867.1| V-type ATP synthase subunit B [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025660|ref|YP_001933432.1| V-type ATP synthase subunit B [Treponema pallidum subsp. pallidum
           SS14]
 gi|12585432|sp|O83442|VATB1_TREPA RecName: Full=V-type ATP synthase beta chain 1; AltName:
           Full=V-ATPase subunit B 1
 gi|3322710|gb|AAC65413.1| V-type ATPase, subunit B (atpB-1) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018235|gb|ACD70853.1| V-type ATPase, subunit B [Treponema pallidum subsp. pallidum SS14]
 gi|291059813|gb|ADD72548.1| V-type sodium ATPase, B subunit [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 430

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 175/362 (48%), Gaps = 14/362 (3%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  ++ V  G+    +    D+L +V ++  D+V +     G  IS G  V   GR   
Sbjct: 16  ITVRAKGVHYGELARVKTAFGDSLAEVNKLEGDVVSLQVFAGGRGISTGSEVRFLGRGML 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +S S    GR+ N  G P DG  +L +G + +   S V PA  R    +  +TGI +ID+
Sbjct: 76  VSFSDYLLGRIFNGSGVPRDGGPALKEGRVEIGGPS-VNPA-KRVIARRMIRTGIPMIDV 133

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREF---IEDYLG 211
           F  L   Q++ +F+ SG   + LL+  A     D +++  +G +  +   F   +E+   
Sbjct: 134 FNTLVVSQKLPIFSSSGEPYNELLARIAMQAEVDVIVLGGMGLKHDDYLYFKSALEE--A 191

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L ++V+ V T+ +  +   M P   + +AE F+ KG +VL++L  +T FA +++EIA 
Sbjct: 192 GALSRAVLFVHTASDPTVECLMVPDMCLAVAEQFALKGRDVLVLLTDMTNFADAMKEIAI 251

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              ++P  RGYP  ++S+L    E+      + G++T +    + GD+   P+ D+   I
Sbjct: 252 IQEQVPSNRGYPGDLYSQLASRYEK-AVDFDDAGSVTILAVTTMPGDDVTHPVPDNTGYI 310

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            +G   L     + GR  P   L+ + +  +    AD + L+ ++  L   + +  + R 
Sbjct: 311 TEGQFYL-----KNGRIEPFGSLSRLKQNVNGRTRADHRALMDNMIKLYAAYRDALEKRS 365

Query: 392 IG 393
           +G
Sbjct: 366 MG 367


>gi|291566391|dbj|BAI88663.1| ATP synthase alpha chain [Arthrospira platensis NIES-39]
          Length = 505

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 153/334 (45%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G EI  G  V   GR    P      GRVI+ALG+PIDG 
Sbjct: 60  TIGVALNLEEDNVGAVLMGEGLEIQEGSAVTATGRIAQVPVGEAMLGRVIDALGRPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   D  + + S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEIQASDTRL-LESPAPGIIDRRSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 L-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +         D + + + +G++   V + +        L  ++VV A + +   L+ +
Sbjct: 179 IAIDTIINQKEEDVICVYVAIGQKASTVAQVVSTLEEKGALPYTIVVAANASDPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +G   L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAAMAEYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V
Sbjct: 299 LERAAKLNDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAV 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A +   KK+   +   + +F E
Sbjct: 359 NAGISVSRVGSAAQTKAMKKVAGKVKLELAQFAE 392


>gi|182679694|ref|YP_001833840.1| F0F1 ATP synthase subunit alpha [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635577|gb|ACB96351.1| ATP synthase F1, alpha subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 504

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 133/268 (49%), Gaps = 6/268 (2%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRVI+ LG+P+DG  ++        +    P  + R  V +  +TGI V+D    L  G
Sbjct: 107 LGRVIDPLGRPLDGGGTV-MAKTRHPVERPAPAIIERDLVAQQVETGILVVDALFTLGRG 165

Query: 162 QRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+ + +         D + I + VG+R   V   IE        ++ +
Sbjct: 166 QRELIIGDRATGKTAIAVDTIINQKHSDIISIYVAVGQRATAVERVIEAIKQYGAPERCI 225

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
            VVA++  SP L+ +AP    TIAEYF  +G + L+++D +T+ A + RE+A  + E P 
Sbjct: 226 FVVASAAASPGLQWIAPFAGFTIAEYFRDQGGHALIVIDDLTKHAATHRELALLTREPPG 285

Query: 279 ARGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  +F    RLLER     +E+  G++TA+     D  N +  I  ++ SI DG I
Sbjct: 286 REAYPGDIFYLHARLLERAAKLSAERGGGSLTALPIAETDASNLSAYIPTNLISITDGQI 345

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKA 364
           VLN  L    + P VD   SVSR+  KA
Sbjct: 346 VLNAQLFAANQRPAVDVGLSVSRVGGKA 373


>gi|330443397|ref|NP_009453.2| Atp1p [Saccharomyces cerevisiae S288c]
 gi|307568098|pdb|2XOK|A Chain A, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568099|pdb|2XOK|B Chain B, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568100|pdb|2XOK|C Chain C, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|2447011|dbj|BAA22508.1| F1F0-ATPase alpha subunit precursor [Saccharomyces cerevisiae]
 gi|51013389|gb|AAT92988.1| YBL099W [Saccharomyces cerevisiae]
 gi|151946302|gb|EDN64524.1| F1F0 ATP synthase alpha subunit [Saccharomyces cerevisiae YJM789]
 gi|190408917|gb|EDV12182.1| F1F0-ATPase alpha subunit [Saccharomyces cerevisiae RM11-1a]
 gi|207347937|gb|EDZ73955.1| YBL099Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271185|gb|EEU06270.1| Atp1p [Saccharomyces cerevisiae JAY291]
 gi|259144745|emb|CAY77684.1| Atp1p [Saccharomyces cerevisiae EC1118]
 gi|323310139|gb|EGA63331.1| Atp1p [Saccharomyces cerevisiae FostersO]
 gi|323356219|gb|EGA88023.1| Atp1p [Saccharomyces cerevisiae VL3]
 gi|329136702|tpg|DAA07026.2| TPA: Atp1p [Saccharomyces cerevisiae S288c]
          Length = 545

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 122 GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 177

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 178 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 237

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 238 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 297

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 298 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 357

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 358 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 417

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 418 KALKQVAGSLKLFLAQYRE 436


>gi|225552202|ref|ZP_03773142.1| V-type ATP synthase beta chain [Borrelia sp. SV1]
 gi|225371200|gb|EEH00630.1| V-type ATP synthase beta chain [Borrelia sp. SV1]
          Length = 434

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    +S  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGVSTSDEIKFLGHSMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPKDGGPSLD--DNLIEIGG--PSANPTKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLIRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ KG  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRAIFFVHTANDSVVESLTVPDISLSVAEKFALKGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITILAVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ S+  L    +E+ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNSRTRDDHRTIMDSMIKLYASSKESVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|156739776|gb|ABU93541.1| ATP synthase beta subunit [Leptorumohra quadripinnata]
          Length = 394

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVADLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 150 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 210 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 326

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 327 YKELQDIIAILG 338


>gi|166836576|gb|ABY90520.1| ATP synthase beta chain [Salvinia natans]
          Length = 380

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 141/270 (52%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 35  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 94

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 95  GNDLYIEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 154

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 155 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 212

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   ++  
Sbjct: 213 VYVPADDLTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 271

Query: 373 --VSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 272 DTAQGVKETLQRYKELQDIIAI----PGLD 297


>gi|149384523|gb|ABR25084.1| ATP synthase beta chain [Dryopteris uniformis]
          Length = 426

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 163/339 (48%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   V  R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVPPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 331 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|25808465|gb|AAN74359.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808489|gb|AAN74371.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|30959122|gb|AAO73320.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|30959124|gb|AAO73321.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|319778923|ref|YP_004129836.1| ATP synthase alpha chain [Taylorella equigenitalis MCE9]
 gi|317108947|gb|ADU91693.1| ATP synthase alpha chain [Taylorella equigenitalis MCE9]
          Length = 513

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 164/353 (46%), Gaps = 30/353 (8%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPID 114
           ++  G  + +  D V    +G    IS GD V   GR    P      GRV+N LG PID
Sbjct: 57  NNTFGLALNLERDSVGAVILGNYTGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPID 116

Query: 115 GDDSLGKGDLSME---IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           G     KG ++ +   ++ KV P  ++RQ V +  +TGI+ ID   P+  GQR  +    
Sbjct: 117 G-----KGPINAQLTDVIEKVAPGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDR 171

Query: 171 GIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSD 225
             GK+ +   ++  +     K I   VG++   V   +   E++    ++ ++VV AT+ 
Sbjct: 172 QTGKTAVAVDAILNQKGTGVKCIYVAVGQKAATVNNVVRTLEEH--GAMEYTIVVSATAS 229

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           ES  ++ +AP    T+ EYF  +G++ L+I D +T+ A + R+++      P    YP  
Sbjct: 230 ESAAMQYLAPYAGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGD 289

Query: 286 VFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           +F    RLLER              G  + + G++TA+  +     + +  +  +V SI 
Sbjct: 290 IFYLHSRLLERAARVNTDYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISIT 349

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           DG I L   L   G  P ++   SVSR+   A +   KKL   +   + ++ E
Sbjct: 350 DGQIFLETDLFNAGVRPAINAGVSVSRVGGSAQTKVVKKLSGGIRTDLAQYRE 402


>gi|310659422|ref|YP_003937143.1| f1 sector of membrane-bound ATP synthase subunit alpha [Clostridium
           sticklandii DSM 519]
 gi|308826200|emb|CBH22238.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Clostridium sticklandii]
          Length = 504

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 21/362 (5%)

Query: 44  CL-GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC 102
           C+ G+ +  +G   D     + +  D V    +G  E I  GD V   GR    P     
Sbjct: 47  CMAGELLQFEG---DVYAMALNLEEDFVGAVMLGSDENIKEGDTVKRTGRIVEVPVGNQL 103

Query: 103 -GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+NALG+PIDG   +   D    I ++ P  + R+ V +  +TGI+ ID   P+  G
Sbjct: 104 LGRVLNALGQPIDGKGPINT-DTFRPIETQAPGIIERKSVHEPLQTGIKSIDSMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK--- 216
           QR  +      GK+T+ +         D + I + +G++   V + +     D L+K   
Sbjct: 163 QRELIIGDRQTGKTTIAIDTIINQKGKDVICIYVAIGQKRSTVAQIV-----DTLEKAGA 217

Query: 217 ---SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              ++VV AT+ E   L+ ++P    ++ E+F  +G +VL + D +++ A + R ++   
Sbjct: 218 MDYTIVVAATASELAPLQYISPYAGCSMGEHFMHEGKHVLCVYDDLSKHAVAYRAMSLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    YP  VF    RLLER      EK  G++TA+  +     + +  I  +V SI
Sbjct: 278 RRPPGREAYPGDVFYLHSRLLERAAKLSDEKGAGSLTALPIIETQAGDVSAYIPTNVISI 337

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P V+P  SVSR+   A     KK+  ++     ++ E +    
Sbjct: 338 TDGQIFLESELFFSGVRPAVNPGISVSRVGGNAQIKAMKKVAGTVKLAYAQYRELQSFAQ 397

Query: 392 IG 393
            G
Sbjct: 398 FG 399


>gi|156739786|gb|ABU93546.1| ATP synthase beta subunit [Peranema luzonicum]
          Length = 391

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 151/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|149798687|gb|ABR32034.1| ATP synthase beta chain [Dryopteris aemula]
          Length = 426

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 149/304 (49%), Gaps = 22/304 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 39  LGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +  V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAAYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL R LA +G YP VDPL S S ++ + W   E+       +   + R++E
Sbjct: 274 TSAHLDATTVLPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDI 389
            +DI
Sbjct: 333 LQDI 336


>gi|323934915|gb|EGB31293.1| ATP synthase F1 [Escherichia coli E1520]
          Length = 513

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLDHDGFSA-VEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|256545234|ref|ZP_05472599.1| V-type sodium ATPase, catalytic A subunit [Anaerococcus vaginalis
           ATCC 51170]
 gi|256399061|gb|EEU12673.1| V-type sodium ATPase, catalytic A subunit [Anaerococcus vaginalis
           ATCC 51170]
          Length = 591

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 120/228 (52%), Gaps = 11/228 (4%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RV+DIF P+  G  + +  G G GK+ L    A+    D +I    GERG E+ + +
Sbjct: 216 TGQRVLDIFFPVAKGGTVAIPGGFGTGKTMLQHQLAQYSNADIIIYIGCGERGNEMTQVL 275

Query: 207 EDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNVLLILDS 258
           ED+        G  L +  +++A +   P+  + A + T +T+AEYF   G +V L+ DS
Sbjct: 276 EDFPNLIDPNTGRGLMERTILIANTSNMPVAAREASIYTGITMAEYFRDMGYDVALMADS 335

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS---EKEKGNITAVISVLV 315
            +R+A ++REI+    E+P   GYP  + S L +  ER G         G++T + +V  
Sbjct: 336 TSRWAEALREISARLEEIPAEEGYPAYLGSRLSQFYERAGDFINLNGSHGSVTLIGAVSP 395

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G + ++P+ ++ R  ++  + L+++LA    YP ++ L S S   ++
Sbjct: 396 TGGDFSEPVTENTRRSVNVFLGLDKNLAYSRHYPAINWLNSYSNYLNQ 443


>gi|157285299|gb|ABV31389.1| ATPase [Vibrio tapetis]
 gi|157285301|gb|ABV31390.1| ATPase [Vibrio tapetis]
          Length = 441

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 21/303 (6%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV+N LG+PIDG   + +  LS  I    P  + R+ V++  +TG + +D   P+  
Sbjct: 67  LLGRVVNTLGEPIDGKGPI-EAKLSSPIEVIAPGVIARKSVDQPVQTGYKAVDSMIPIGR 125

Query: 161 GQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLK 215
           GQR  +     IGK+ L   S+  + D     I   +G++   +   +   E++    L 
Sbjct: 126 GQRELIIGDRQIGKTALAIDSIINQRDSGIFSIYVAIGQKASTIANVVRKLEEH--GALA 183

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+     
Sbjct: 184 NTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKR 243

Query: 276 LPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHND 322
            P    YP  VF    RLLER              G  + + G++TA+  +     + + 
Sbjct: 244 PPGREAYPGDVFYLHSRLLERAARVSEAYVEAFTNGEVKGKTGSLTALPIIETQAGDVSA 303

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + +
Sbjct: 304 FVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIVKKLSGGIRTALAQ 363

Query: 383 FEE 385
           + E
Sbjct: 364 YRE 366


>gi|317471609|ref|ZP_07930953.1| ATP synthase alpha/beta family protein [Anaerostipes sp. 3_2_56FAA]
 gi|316900924|gb|EFV22894.1| ATP synthase alpha/beta family protein [Anaerostipes sp. 3_2_56FAA]
          Length = 482

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 24/335 (7%)

Query: 42  YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISP 97
           Y  + +FVV    N   LG++I +  D   I      + + L +    L  H     +SP
Sbjct: 26  YEEIVEFVVE--GNKKKLGKIIELYEDKAIIQVFDTTDNMGLSNTHTRLTGHPMEIFLSP 83

Query: 98  SACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDI 154
                GR +N LGKPIDG   LG    D+   + + +P    R+   + F  TGI  ID 
Sbjct: 84  D--ILGRTLNGLGKPIDG---LGPIVSDVKRNV-NGLPLNPVRREYPRNFICTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS-----DCFDK--VIISLVGERGREVREFIE 207
              L  GQ++ +F+G+G+    L +          D  +   ++ + +G +  +   F  
Sbjct: 138 LMTLIRGQKLPIFSGNGLLHDQLAAQIVTQASLGGDSMENFGIVFAAMGVKHDDADFFRR 197

Query: 208 DYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            +        V +       P+  ++  P  A+T AEY + +   ++L+IL  +T FA +
Sbjct: 198 TFEESGALSHVAMFLNMANDPVAERLITPKVALTAAEYLAFEHHMHILVILTDMTAFAEA 257

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +RE++++ GE+P  +G+P  ++SEL  + ER G  E   G++T +  + +  D+   PI 
Sbjct: 258 MREVSSSKGEIPSRKGFPGYLYSELAMIYERAGIVEGIDGSVTQIPILTMPNDDITHPIP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           D    I +G IVL+RSL  +  YPP+  L S+SRL
Sbjct: 318 DLTGYITEGQIVLDRSLHGQAVYPPISVLPSLSRL 352


>gi|167746805|ref|ZP_02418932.1| hypothetical protein ANACAC_01517 [Anaerostipes caccae DSM 14662]
 gi|167653765|gb|EDR97894.1| hypothetical protein ANACAC_01517 [Anaerostipes caccae DSM 14662]
          Length = 482

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 24/335 (7%)

Query: 42  YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISP 97
           Y  + +FVV    N   LG++I +  D   I      + + L +    L  H     +SP
Sbjct: 26  YEEIVEFVVE--GNKKKLGKIIELYEDKAIIQVFDTTDNMGLSNTHTRLTGHPMEIFLSP 83

Query: 98  SACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDI 154
                GR +N LGKPIDG   LG    D+   + + +P    R+   + F  TGI  ID 
Sbjct: 84  D--ILGRTLNGLGKPIDG---LGPIVSDVKRNV-NGLPLNPVRREYPRNFICTGISAIDG 137

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS-----DCFDK--VIISLVGERGREVREFIE 207
              L  GQ++ +F+G+G+    L +          D  +   ++ + +G +  +   F  
Sbjct: 138 LMTLIRGQKLPIFSGNGLPHDQLAAQIVTQASLGGDSMENFGIVFAAMGVKHDDADFFRR 197

Query: 208 DYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
            +        V +       P+  ++  P  A+T AEY + +   ++L+IL  +T FA +
Sbjct: 198 TFEESGALGHVAMFLNMANDPVAERLITPKVALTAAEYLAFEHHMHILVILTDMTAFAEA 257

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +RE++++ GE+P  +G+P  ++SEL  + ER G  E   G++T +  + +  D+   PI 
Sbjct: 258 MREVSSSKGEIPSRKGFPGYLYSELAMIYERAGIVEGIDGSVTQIPILTMPNDDITHPIP 317

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           D    I +G IVL+RSL  +  YPP+  L S+SRL
Sbjct: 318 DLTGYITEGQIVLDRSLHGQAVYPPISVLPSLSRL 352


>gi|309704182|emb|CBJ03529.1| ATP synthase alpha subunit [Escherichia coli ETEC H10407]
          Length = 513

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLDHDGFSA-VEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVTIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|149925406|ref|ZP_01913670.1| F0F1 ATP synthase subunit alpha [Limnobacter sp. MED105]
 gi|149825523|gb|EDM84731.1| F0F1 ATP synthase subunit alpha [Limnobacter sp. MED105]
          Length = 513

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 178/380 (46%), Gaps = 36/380 (9%)

Query: 35  TVTCLSQYVC----LGDFVVHQGKN----SDNLGQVIRINLDIVYICPVGIGEEISLGDL 86
           TV  +S  +C    L D  V QG+      +  G  + +  D V +  +G  E IS GD+
Sbjct: 30  TVVSVSDGICRVHGLSD--VMQGEMLEFPGNTFGLALNLERDSVGVVILGSYEHISEGDM 87

Query: 87  VFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPA-MNRQRVEK 143
           V   GR    P      GRV+NALG PIDG    G  +  M +++ KV P  + R+ V++
Sbjct: 88  VKCTGRILEVPVGPELRGRVVNALGVPIDGK---GPVNAKMTDVIEKVAPGVIERKSVDQ 144

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGRE 201
             +TG++ ID   P+  GQR  +      GK+ +   ++  +       +   VG++   
Sbjct: 145 PLQTGVKAIDAMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGTGVTCVYVAVGQKASS 204

Query: 202 VREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           +   +   E++    L+ ++VVVA++ ES  ++ +AP +  T+ EYF  +G++ L++ D 
Sbjct: 205 IVNVLRKLEEH--GALEYTIVVVASASESAAMQYLAPYSGCTMGEYFRDRGEDALIVYDD 262

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKG 305
           +++ A + R+I+      P    YP  VF    RLLER              G  + + G
Sbjct: 263 LSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVNAEYVEKFTKGEVKGKTG 322

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +     +    +  +V SI DG I L   L   G  P ++   SVSR+   A 
Sbjct: 323 SLTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQ 382

Query: 366 SADEKKLVSSLTHLIHRFEE 385
           +   KKL   +   + ++ E
Sbjct: 383 TKVVKKLSGGIRTDLAQYRE 402


>gi|15804334|ref|NP_290373.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 EDL933]
 gi|15833930|ref|NP_312703.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           Sakai]
 gi|16131602|ref|NP_418190.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24115037|ref|NP_709547.1| F0F1 ATP synthase subunit alpha [Shigella flexneri 2a str. 301]
 gi|26250478|ref|NP_756518.1| F0F1 ATP synthase subunit alpha [Escherichia coli CFT073]
 gi|30064961|ref|NP_839132.1| F0F1 ATP synthase subunit alpha [Shigella flexneri 2a str. 2457T]
 gi|74314240|ref|YP_312659.1| F0F1 ATP synthase subunit alpha [Shigella sonnei Ss046]
 gi|82546105|ref|YP_410052.1| F0F1 ATP synthase subunit alpha [Shigella boydii Sb227]
 gi|82779074|ref|YP_405423.1| F0F1 ATP synthase subunit alpha [Shigella dysenteriae Sd197]
 gi|89110273|ref|AP_004053.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. W3110]
 gi|91213259|ref|YP_543245.1| F0F1 ATP synthase subunit alpha [Escherichia coli UTI89]
 gi|110644075|ref|YP_671805.1| F0F1 ATP synthase subunit alpha [Escherichia coli 536]
 gi|110807558|ref|YP_691078.1| F0F1 ATP synthase subunit alpha [Shigella flexneri 5 str. 8401]
 gi|157155061|ref|YP_001465225.1| F0F1 ATP synthase subunit alpha [Escherichia coli E24377A]
 gi|157163216|ref|YP_001460534.1| F0F1 ATP synthase subunit alpha [Escherichia coli HS]
 gi|168748536|ref|ZP_02773558.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753636|ref|ZP_02778643.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759934|ref|ZP_02784941.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766234|ref|ZP_02791241.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772217|ref|ZP_02797224.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|168786577|ref|ZP_02811584.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|168798782|ref|ZP_02823789.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|170022229|ref|YP_001727183.1| F0F1 ATP synthase subunit alpha [Escherichia coli ATCC 8739]
 gi|170083235|ref|YP_001732555.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170682498|ref|YP_001746064.1| F0F1 ATP synthase subunit alpha [Escherichia coli SMS-3-5]
 gi|170766991|ref|ZP_02901444.1| ATP synthase F1, alpha subunit [Escherichia albertii TW07627]
 gi|188492290|ref|ZP_02999560.1| ATP synthase F1, alpha subunit [Escherichia coli 53638]
 gi|191165785|ref|ZP_03027623.1| ATP synthase F1, alpha subunit [Escherichia coli B7A]
 gi|191170554|ref|ZP_03032107.1| ATP synthase F1, alpha subunit [Escherichia coli F11]
 gi|193063860|ref|ZP_03044947.1| ATP synthase F1, alpha subunit [Escherichia coli E22]
 gi|193069205|ref|ZP_03050162.1| ATP synthase F1, alpha subunit [Escherichia coli E110019]
 gi|194428137|ref|ZP_03060681.1| ATP synthase F1, alpha subunit [Escherichia coli B171]
 gi|194431102|ref|ZP_03063395.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1012]
 gi|194435744|ref|ZP_03067847.1| ATP synthase F1, alpha subunit [Escherichia coli 101-1]
 gi|195936361|ref|ZP_03081743.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           EC4024]
 gi|208806672|ref|ZP_03249009.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813286|ref|ZP_03254615.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818307|ref|ZP_03258627.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400618|ref|YP_002273262.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921215|ref|YP_002295299.1| F0F1 ATP synthase subunit alpha [Escherichia coli SE11]
 gi|215489072|ref|YP_002331503.1| F0F1 ATP synthase subunit alpha [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217326617|ref|ZP_03442701.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218551268|ref|YP_002385060.1| F0F1 ATP synthase subunit alpha [Escherichia fergusonii ATCC 35469]
 gi|218556305|ref|YP_002389219.1| F0F1 ATP synthase subunit alpha [Escherichia coli IAI1]
 gi|218560809|ref|YP_002393722.1| F0F1 ATP synthase subunit alpha [Escherichia coli S88]
 gi|218692022|ref|YP_002400234.1| F0F1 ATP synthase subunit alpha [Escherichia coli ED1a]
 gi|218697460|ref|YP_002405127.1| F0F1 ATP synthase subunit alpha [Escherichia coli 55989]
 gi|218702584|ref|YP_002410213.1| F0F1 ATP synthase subunit alpha [Escherichia coli IAI39]
 gi|218707380|ref|YP_002414899.1| F0F1 ATP synthase subunit alpha [Escherichia coli UMN026]
 gi|227883956|ref|ZP_04001761.1| F0F1 ATP synthase subunit alpha [Escherichia coli 83972]
 gi|237703535|ref|ZP_04534016.1| ATP synthase subunit alpha [Escherichia sp. 3_2_53FAA]
 gi|238902825|ref|YP_002928621.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli BW2952]
 gi|253775631|ref|YP_003038462.1| F0F1 ATP synthase subunit alpha [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038953|ref|ZP_04873005.1| ATP synthase F1, alpha subunit [Escherichia sp. 1_1_43]
 gi|254163686|ref|YP_003046794.1| F0F1 ATP synthase subunit alpha [Escherichia coli B str. REL606]
 gi|254795740|ref|YP_003080577.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021244|ref|ZP_05435109.1| F0F1 ATP synthase subunit alpha [Shigella sp. D9]
 gi|256025535|ref|ZP_05439400.1| F0F1 ATP synthase subunit alpha [Escherichia sp. 4_1_40B]
 gi|260846481|ref|YP_003224259.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O103:H2 str. 12009]
 gi|260857851|ref|YP_003231742.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O26:H11 str. 11368]
 gi|260870468|ref|YP_003236870.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O111:H- str. 11128]
 gi|261225891|ref|ZP_05940172.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258936|ref|ZP_05951469.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291285158|ref|YP_003501976.1| ATP synthase subunit alpha [Escherichia coli O55:H7 str. CB9615]
 gi|293407371|ref|ZP_06651293.1| atpA [Escherichia coli FVEC1412]
 gi|293413184|ref|ZP_06655850.1| ATP synthase F1 [Escherichia coli B354]
 gi|293417207|ref|ZP_06659834.1| ATP synthase F1 [Escherichia coli B185]
 gi|293464060|ref|ZP_06664474.1| ATP synthase F1 [Escherichia coli B088]
 gi|297518742|ref|ZP_06937128.1| F0F1 ATP synthase subunit alpha [Escherichia coli OP50]
 gi|298383113|ref|ZP_06992708.1| ATP synthase subunit alpha [Escherichia coli FVEC1302]
 gi|300815011|ref|ZP_07095236.1| ATP synthase F1, alpha subunit [Escherichia coli MS 107-1]
 gi|300824556|ref|ZP_07104666.1| ATP synthase F1, alpha subunit [Escherichia coli MS 119-7]
 gi|300896063|ref|ZP_07114622.1| ATP synthase F1, alpha subunit [Escherichia coli MS 198-1]
 gi|300902984|ref|ZP_07120927.1| ATP synthase F1, alpha subunit [Escherichia coli MS 84-1]
 gi|300916397|ref|ZP_07133137.1| ATP synthase F1, alpha subunit [Escherichia coli MS 115-1]
 gi|300925564|ref|ZP_07141437.1| ATP synthase F1, alpha subunit [Escherichia coli MS 182-1]
 gi|300932369|ref|ZP_07147634.1| ATP synthase F1, alpha subunit [Escherichia coli MS 187-1]
 gi|300940920|ref|ZP_07155446.1| ATP synthase F1, alpha subunit [Escherichia coli MS 21-1]
 gi|300950651|ref|ZP_07164545.1| ATP synthase F1, alpha subunit [Escherichia coli MS 116-1]
 gi|300958742|ref|ZP_07170859.1| ATP synthase F1, alpha subunit [Escherichia coli MS 175-1]
 gi|300983830|ref|ZP_07176772.1| ATP synthase F1, alpha subunit [Escherichia coli MS 200-1]
 gi|300984352|ref|ZP_07176958.1| ATP synthase F1, alpha subunit [Escherichia coli MS 45-1]
 gi|301019830|ref|ZP_07183971.1| ATP synthase F1, alpha subunit [Escherichia coli MS 196-1]
 gi|301047557|ref|ZP_07194629.1| ATP synthase F1, alpha subunit [Escherichia coli MS 185-1]
 gi|301305617|ref|ZP_07211707.1| ATP synthase F1, alpha subunit [Escherichia coli MS 124-1]
 gi|301324965|ref|ZP_07218520.1| ATP synthase F1, alpha subunit [Escherichia coli MS 78-1]
 gi|301644410|ref|ZP_07244409.1| ATP synthase F1, alpha subunit [Escherichia coli MS 146-1]
 gi|306815914|ref|ZP_07450052.1| F0F1 ATP synthase subunit alpha [Escherichia coli NC101]
 gi|307140434|ref|ZP_07499790.1| F0F1 ATP synthase subunit alpha [Escherichia coli H736]
 gi|307313194|ref|ZP_07592819.1| ATP synthase F1, alpha subunit [Escherichia coli W]
 gi|309784445|ref|ZP_07679084.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1617]
 gi|309795709|ref|ZP_07690124.1| ATP synthase F1, alpha subunit [Escherichia coli MS 145-7]
 gi|312967856|ref|ZP_07782068.1| ATP synthase F1, alpha subunit [Escherichia coli 2362-75]
 gi|312971974|ref|ZP_07786148.1| ATP synthase F1, alpha subunit [Escherichia coli 1827-70]
 gi|331644461|ref|ZP_08345590.1| ATP synthase F1, alpha subunit [Escherichia coli H736]
 gi|331649560|ref|ZP_08350646.1| ATP synthase F1, alpha subunit [Escherichia coli M605]
 gi|331655396|ref|ZP_08356395.1| ATP synthase F1, alpha subunit [Escherichia coli M718]
 gi|331660078|ref|ZP_08361016.1| ATP synthase F1, alpha subunit [Escherichia coli TA206]
 gi|331665388|ref|ZP_08366289.1| ATP synthase F1, alpha subunit [Escherichia coli TA143]
 gi|331670584|ref|ZP_08371423.1| ATP synthase F1, alpha subunit [Escherichia coli TA271]
 gi|331675220|ref|ZP_08375973.1| ATP synthase F1, alpha subunit [Escherichia coli TA280]
 gi|331679838|ref|ZP_08380508.1| ATP synthase F1, alpha subunit [Escherichia coli H591]
 gi|331685461|ref|ZP_08386047.1| ATP synthase F1, alpha subunit [Escherichia coli H299]
 gi|332282471|ref|ZP_08394884.1| F1 sector of membrane-bound ATP synthase alpha subunit [Shigella
           sp. D9]
 gi|81175141|sp|P0ABB2|ATPA_ECO57 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81175142|sp|P0ABB1|ATPA_ECOL6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81175143|sp|P0ABB0|ATPA_ECOLI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81175144|sp|P0ABB3|ATPA_SHIFL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118573476|sp|Q0TAX5|ATPA_ECOL5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119367953|sp|Q1R4K0|ATPA_ECOUT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123146529|sp|Q0SYU2|ATPA_SHIF8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007210|sp|Q31UN4|ATPA_SHIBS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007211|sp|Q329S3|ATPA_SHIDS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007212|sp|Q3YVN8|ATPA_SHISS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166990355|sp|A7ZTU6|ATPA_ECO24 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166990356|sp|A8A6J7|ATPA_ECOHS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081299|sp|B1IX04|ATPA_ECOLC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739875|sp|B7MGF4|ATPA_ECO45 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739876|sp|B5YXD8|ATPA_ECO5E RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739877|sp|B7NR36|ATPA_ECO7I RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739878|sp|B7M590|ATPA_ECO8A RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739879|sp|B1X9W2|ATPA_ECODH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739880|sp|B7NF50|ATPA_ECOLU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739881|sp|B6I3X1|ATPA_ECOSE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739882|sp|B1LL61|ATPA_ECOSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739885|sp|B7LK79|ATPA_ESCF3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807695|sp|B7UMJ9|ATPA_ECO27 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807696|sp|B7L884|ATPA_ECO55 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807697|sp|B7N2H3|ATPA_ECO81 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|259585426|sp|C4ZZ12|ATPA_ECOBW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|12518591|gb|AAG58937.1|AE005605_5 membrane-bound ATP synthase, F1 sector, alpha-subunit [Escherichia
           coli O157:H7 str. EDL933]
 gi|26110908|gb|AAN83092.1|AE016769_207 ATP synthase alpha chain [Escherichia coli CFT073]
 gi|290583|gb|AAA62086.1| ATP synthase F1 alpha subunit [Escherichia coli]
 gi|1790172|gb|AAC76757.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|13364151|dbj|BAB38099.1| membrane-bound ATP synthase alpha-subunit AtpA [Escherichia coli
           O157:H7 str. Sakai]
 gi|24054296|gb|AAN45254.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           flexneri 2a str. 301]
 gi|30043222|gb|AAP18943.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           flexneri 2a str. 2457T]
 gi|73857717|gb|AAZ90424.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           sonnei Ss046]
 gi|81243222|gb|ABB63932.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           dysenteriae Sd197]
 gi|81247516|gb|ABB68224.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           boydii Sb227]
 gi|85676304|dbj|BAE77554.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|91074833|gb|ABE09714.1| membrane-bound ATP synthase F1 sector alpha-subunit [Escherichia
           coli UTI89]
 gi|110345667|gb|ABG71904.1| ATP synthase alpha chain [Escherichia coli 536]
 gi|110617106|gb|ABF05773.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           flexneri 5 str. 8401]
 gi|157068896|gb|ABV08151.1| ATP synthase F1, alpha subunit [Escherichia coli HS]
 gi|157077091|gb|ABV16799.1| ATP synthase F1, alpha subunit [Escherichia coli E24377A]
 gi|169757157|gb|ACA79856.1| ATP synthase F1, alpha subunit [Escherichia coli ATCC 8739]
 gi|169891070|gb|ACB04777.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170124429|gb|EDS93360.1| ATP synthase F1, alpha subunit [Escherichia albertii TW07627]
 gi|170520216|gb|ACB18394.1| ATP synthase F1, alpha subunit [Escherichia coli SMS-3-5]
 gi|187771496|gb|EDU35340.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016960|gb|EDU55082.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188487489|gb|EDU62592.1| ATP synthase F1, alpha subunit [Escherichia coli 53638]
 gi|189359155|gb|EDU77574.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364718|gb|EDU83137.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369503|gb|EDU87919.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373464|gb|EDU91880.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|189378692|gb|EDU97108.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|190904109|gb|EDV63820.1| ATP synthase F1, alpha subunit [Escherichia coli B7A]
 gi|190909362|gb|EDV68948.1| ATP synthase F1, alpha subunit [Escherichia coli F11]
 gi|192930575|gb|EDV83182.1| ATP synthase F1, alpha subunit [Escherichia coli E22]
 gi|192957529|gb|EDV87975.1| ATP synthase F1, alpha subunit [Escherichia coli E110019]
 gi|194413895|gb|EDX30173.1| ATP synthase F1, alpha subunit [Escherichia coli B171]
 gi|194420557|gb|EDX36633.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1012]
 gi|194425287|gb|EDX41271.1| ATP synthase F1, alpha subunit [Escherichia coli 101-1]
 gi|208726473|gb|EDZ76074.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734563|gb|EDZ83250.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738430|gb|EDZ86112.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209162018|gb|ACI39451.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209753868|gb|ACI75241.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753870|gb|ACI75242.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753872|gb|ACI75243.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753874|gb|ACI75244.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753876|gb|ACI75245.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209914474|dbj|BAG79548.1| ATP synthase alpha subunit [Escherichia coli SE11]
 gi|215267144|emb|CAS11592.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217322838|gb|EEC31262.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354192|emb|CAV00821.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli 55989]
 gi|218358810|emb|CAQ91467.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia fergusonii ATCC 35469]
 gi|218363074|emb|CAR00712.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli IAI1]
 gi|218367578|emb|CAR05362.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli S88]
 gi|218372570|emb|CAR20444.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli IAI39]
 gi|218429586|emb|CAR10544.2| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli ED1a]
 gi|218434477|emb|CAR15404.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli UMN026]
 gi|222035447|emb|CAP78192.1| ATP synthase subunit alpha [Escherichia coli LF82]
 gi|226838918|gb|EEH70945.1| ATP synthase F1, alpha subunit [Escherichia sp. 1_1_43]
 gi|226902799|gb|EEH89058.1| ATP synthase subunit alpha [Escherichia sp. 3_2_53FAA]
 gi|227839234|gb|EEJ49700.1| F0F1 ATP synthase subunit alpha [Escherichia coli 83972]
 gi|238861067|gb|ACR63065.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli BW2952]
 gi|242379272|emb|CAQ34079.1| ATP synthase, F1 complex, alpha subunit, subunit of alpha subunit
           complex, ATP synthase, F1 complex and ATP synthase
           [Escherichia coli BL21(DE3)]
 gi|253326675|gb|ACT31277.1| ATP synthase F1, alpha subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975587|gb|ACT41258.1| F0F1 ATP synthase subunit alpha [Escherichia coli B str. REL606]
 gi|253979743|gb|ACT45413.1| F0F1 ATP synthase subunit alpha [Escherichia coli BL21(DE3)]
 gi|254595140|gb|ACT74501.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli O157:H7 str. TW14359]
 gi|257756500|dbj|BAI28002.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O26:H11 str. 11368]
 gi|257761628|dbj|BAI33125.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O103:H2 str. 12009]
 gi|257766824|dbj|BAI38319.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O111:H- str. 11128]
 gi|260451409|gb|ACX41831.1| ATP synthase F1, alpha subunit [Escherichia coli DH1]
 gi|281180792|dbj|BAI57122.1| ATP synthase alpha subunit [Escherichia coli SE15]
 gi|281603132|gb|ADA76116.1| ATP synthase subunit alpha [Shigella flexneri 2002017]
 gi|284923848|emb|CBG36947.1| ATP synthase alpha subunit [Escherichia coli 042]
 gi|290765031|gb|ADD58992.1| ATP synthase subunit alpha [Escherichia coli O55:H7 str. CB9615]
 gi|291321692|gb|EFE61128.1| ATP synthase F1 [Escherichia coli B088]
 gi|291425662|gb|EFE98698.1| atpA [Escherichia coli FVEC1412]
 gi|291431238|gb|EFF04231.1| ATP synthase F1 [Escherichia coli B185]
 gi|291468317|gb|EFF10812.1| ATP synthase F1 [Escherichia coli B354]
 gi|294489685|gb|ADE88441.1| ATP synthase F1, alpha subunit [Escherichia coli IHE3034]
 gi|298276949|gb|EFI18467.1| ATP synthase subunit alpha [Escherichia coli FVEC1302]
 gi|299882058|gb|EFI90269.1| ATP synthase F1, alpha subunit [Escherichia coli MS 196-1]
 gi|300300543|gb|EFJ56928.1| ATP synthase F1, alpha subunit [Escherichia coli MS 185-1]
 gi|300306859|gb|EFJ61379.1| ATP synthase F1, alpha subunit [Escherichia coli MS 200-1]
 gi|300314623|gb|EFJ64407.1| ATP synthase F1, alpha subunit [Escherichia coli MS 175-1]
 gi|300360049|gb|EFJ75919.1| ATP synthase F1, alpha subunit [Escherichia coli MS 198-1]
 gi|300404979|gb|EFJ88517.1| ATP synthase F1, alpha subunit [Escherichia coli MS 84-1]
 gi|300408388|gb|EFJ91926.1| ATP synthase F1, alpha subunit [Escherichia coli MS 45-1]
 gi|300416301|gb|EFJ99611.1| ATP synthase F1, alpha subunit [Escherichia coli MS 115-1]
 gi|300418338|gb|EFK01649.1| ATP synthase F1, alpha subunit [Escherichia coli MS 182-1]
 gi|300450021|gb|EFK13641.1| ATP synthase F1, alpha subunit [Escherichia coli MS 116-1]
 gi|300454350|gb|EFK17843.1| ATP synthase F1, alpha subunit [Escherichia coli MS 21-1]
 gi|300459874|gb|EFK23367.1| ATP synthase F1, alpha subunit [Escherichia coli MS 187-1]
 gi|300522957|gb|EFK44026.1| ATP synthase F1, alpha subunit [Escherichia coli MS 119-7]
 gi|300531903|gb|EFK52965.1| ATP synthase F1, alpha subunit [Escherichia coli MS 107-1]
 gi|300839125|gb|EFK66885.1| ATP synthase F1, alpha subunit [Escherichia coli MS 124-1]
 gi|300848136|gb|EFK75896.1| ATP synthase F1, alpha subunit [Escherichia coli MS 78-1]
 gi|301077249|gb|EFK92055.1| ATP synthase F1, alpha subunit [Escherichia coli MS 146-1]
 gi|305850310|gb|EFM50767.1| F0F1 ATP synthase subunit alpha [Escherichia coli NC101]
 gi|306906877|gb|EFN37386.1| ATP synthase F1, alpha subunit [Escherichia coli W]
 gi|307555873|gb|ADN48648.1| ATP synthase alpha chain [Escherichia coli ABU 83972]
 gi|307628808|gb|ADN73112.1| F0F1 ATP synthase subunit alpha [Escherichia coli UM146]
 gi|308120588|gb|EFO57850.1| ATP synthase F1, alpha subunit [Escherichia coli MS 145-7]
 gi|308927952|gb|EFP73420.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1617]
 gi|310334351|gb|EFQ00556.1| ATP synthase F1, alpha subunit [Escherichia coli 1827-70]
 gi|312287417|gb|EFR15325.1| ATP synthase F1, alpha subunit [Escherichia coli 2362-75]
 gi|312948300|gb|ADR29127.1| F0F1 ATP synthase subunit alpha [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313647650|gb|EFS12098.1| ATP synthase F1, alpha subunit [Shigella flexneri 2a str. 2457T]
 gi|315063044|gb|ADT77371.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli W]
 gi|315138319|dbj|BAJ45478.1| ATP synthase subunit alpha [Escherichia coli DH1]
 gi|315254573|gb|EFU34541.1| ATP synthase F1, alpha subunit [Escherichia coli MS 85-1]
 gi|315285549|gb|EFU44991.1| ATP synthase F1, alpha subunit [Escherichia coli MS 110-3]
 gi|315292820|gb|EFU52172.1| ATP synthase F1, alpha subunit [Escherichia coli MS 153-1]
 gi|315296878|gb|EFU56167.1| ATP synthase F1, alpha subunit [Escherichia coli MS 16-3]
 gi|315618558|gb|EFU99144.1| ATP synthase F1, alpha subunit [Escherichia coli 3431]
 gi|320180084|gb|EFW55026.1| ATP synthase alpha chain [Shigella boydii ATCC 9905]
 gi|320186283|gb|EFW61019.1| ATP synthase alpha chain [Shigella flexneri CDC 796-83]
 gi|320191162|gb|EFW65812.1| ATP synthase alpha chain [Escherichia coli O157:H7 str. EC1212]
 gi|320193721|gb|EFW68354.1| ATP synthase alpha chain [Escherichia coli WV_060327]
 gi|320201234|gb|EFW75815.1| ATP synthase alpha chain [Escherichia coli EC4100B]
 gi|320639462|gb|EFX09077.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           G5101]
 gi|320644902|gb|EFX13938.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H- str.
           493-89]
 gi|320650168|gb|EFX18664.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H- str. H
           2687]
 gi|320655517|gb|EFX23452.1| F0F1 ATP synthase subunit alpha [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661140|gb|EFX28576.1| F0F1 ATP synthase subunit alpha [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666269|gb|EFX33275.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323155415|gb|EFZ41598.1| ATP synthase F1, alpha subunit [Escherichia coli EPECa14]
 gi|323161014|gb|EFZ46933.1| ATP synthase F1, alpha subunit [Escherichia coli E128010]
 gi|323167008|gb|EFZ52747.1| ATP synthase F1, alpha subunit [Shigella sonnei 53G]
 gi|323173359|gb|EFZ58988.1| ATP synthase F1, alpha subunit [Escherichia coli LT-68]
 gi|323177754|gb|EFZ63338.1| ATP synthase F1, alpha subunit [Escherichia coli 1180]
 gi|323189533|gb|EFZ74813.1| ATP synthase F1, alpha subunit [Escherichia coli RN587/1]
 gi|323380894|gb|ADX53162.1| ATP synthase F1, alpha subunit [Escherichia coli KO11]
 gi|323939203|gb|EGB35416.1| ATP synthase F1 [Escherichia coli E482]
 gi|323944210|gb|EGB40290.1| ATP synthase F1 [Escherichia coli H120]
 gi|323949977|gb|EGB45861.1| ATP synthase F1 [Escherichia coli H252]
 gi|323954971|gb|EGB50749.1| ATP synthase F1 [Escherichia coli H263]
 gi|323959800|gb|EGB55450.1| ATP synthase F1 [Escherichia coli H489]
 gi|323965802|gb|EGB61253.1| ATP synthase F1 [Escherichia coli M863]
 gi|323971213|gb|EGB66459.1| ATP synthase F1 [Escherichia coli TA007]
 gi|323975198|gb|EGB70302.1| ATP synthase F1 [Escherichia coli TW10509]
 gi|324008002|gb|EGB77221.1| ATP synthase F1, alpha subunit [Escherichia coli MS 57-2]
 gi|324012760|gb|EGB81979.1| ATP synthase F1, alpha subunit [Escherichia coli MS 60-1]
 gi|324018468|gb|EGB87687.1| ATP synthase F1, alpha subunit [Escherichia coli MS 117-3]
 gi|324111633|gb|EGC05614.1| ATP synthase F1 [Escherichia fergusonii B253]
 gi|324115910|gb|EGC09836.1| ATP synthase F1 [Escherichia coli E1167]
 gi|325499540|gb|EGC97399.1| F0F1 ATP synthase subunit alpha [Escherichia fergusonii ECD227]
 gi|326340518|gb|EGD64317.1| ATP synthase alpha chain [Escherichia coli O157:H7 str. 1044]
 gi|326341584|gb|EGD65373.1| ATP synthase alpha chain [Escherichia coli O157:H7 str. 1125]
 gi|327250886|gb|EGE62588.1| ATP synthase F1, alpha subunit [Escherichia coli STEC_7v]
 gi|330908047|gb|EGH36566.1| ATP synthase alpha chain [Escherichia coli AA86]
 gi|331036755|gb|EGI08981.1| ATP synthase F1, alpha subunit [Escherichia coli H736]
 gi|331042058|gb|EGI14202.1| ATP synthase F1, alpha subunit [Escherichia coli M605]
 gi|331047411|gb|EGI19489.1| ATP synthase F1, alpha subunit [Escherichia coli M718]
 gi|331053293|gb|EGI25326.1| ATP synthase F1, alpha subunit [Escherichia coli TA206]
 gi|331057898|gb|EGI29884.1| ATP synthase F1, alpha subunit [Escherichia coli TA143]
 gi|331062646|gb|EGI34566.1| ATP synthase F1, alpha subunit [Escherichia coli TA271]
 gi|331067665|gb|EGI39067.1| ATP synthase F1, alpha subunit [Escherichia coli TA280]
 gi|331073010|gb|EGI44335.1| ATP synthase F1, alpha subunit [Escherichia coli H591]
 gi|331077832|gb|EGI49044.1| ATP synthase F1, alpha subunit [Escherichia coli H299]
 gi|332084750|gb|EGI89936.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 155-74]
 gi|332089556|gb|EGI94660.1| ATP synthase F1, alpha subunit [Shigella boydii 3594-74]
 gi|332104823|gb|EGJ08169.1| F1 sector of membrane-bound ATP synthase alpha subunit [Shigella
           sp. D9]
 gi|332345724|gb|AEE59058.1| ATP synthase F1, alpha subunit AtpA [Escherichia coli UMNK88]
 gi|332750743|gb|EGJ81151.1| ATP synthase F1, alpha subunit [Shigella flexneri 4343-70]
 gi|332750903|gb|EGJ81309.1| ATP synthase F1, alpha subunit [Shigella flexneri K-671]
 gi|332751682|gb|EGJ82080.1| ATP synthase F1, alpha subunit [Shigella flexneri 2747-71]
 gi|332764009|gb|EGJ94246.1| ATP synthase F1, alpha subunit [Shigella flexneri 2930-71]
 gi|332995981|gb|EGK15608.1| ATP synthase F1, alpha subunit [Shigella flexneri VA-6]
 gi|332997173|gb|EGK16789.1| ATP synthase F1, alpha subunit [Shigella flexneri K-218]
 gi|332998042|gb|EGK17647.1| ATP synthase F1, alpha subunit [Shigella flexneri K-272]
 gi|333013456|gb|EGK32827.1| ATP synthase F1, alpha subunit [Shigella flexneri K-304]
 gi|333013708|gb|EGK33073.1| ATP synthase F1, alpha subunit [Shigella flexneri K-227]
          Length = 513

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLDHDGFSA-VEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|295065725|ref|YP_003587665.1| ATP synthase CF1 alpha subunit [Anomochloa marantoidea]
 gi|251765249|gb|ACT15403.1| ATP synthase CF1 alpha subunit [Anomochloa marantoidea]
          Length = 508

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 12/369 (3%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +
Sbjct: 63  IALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGKGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G  + S  I +  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 GASE-SRLIEAPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
               +     VI   V  G+R   V + +  +  +  ++ ++VV   +D    L+ +AP 
Sbjct: 182 DTILNQKGQNVICVYVAIGQRASSVAQVVTTFQEEGAMEYTIVVAEMADSLATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   L   + +F E   ++    +   +D      + +   + 
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKLKLELAQFAE---LQAFAQFASALDKTSQNQLARGRRLR 418

Query: 415 DFLKQSPSD 423
           + LKQS S+
Sbjct: 419 ELLKQSQSN 427


>gi|260950559|ref|XP_002619576.1| vacuolar ATP synthase subunit B [Clavispora lusitaniae ATCC 42720]
 gi|238847148|gb|EEQ36612.1| vacuolar ATP synthase subunit B [Clavispora lusitaniae ATCC 42720]
          Length = 511

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 157/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQV--IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV  +R +  IV +     G +I    + F     +I+ S    GRV +  G+PID   
Sbjct: 64  GQVLEVRGSKAIVQVFEGTSGIDIKKTRVEFTGENLKIAVSEDMLGRVFDGSGRPIDKGP 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TG+  ID    +  GQ+I +F+ SG+  + +
Sbjct: 124 KIFAEDY-LDINGSPINPYARIYPEEMISTGVSAIDTMNSIARGQKIPIFSASGLPHNEI 182

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 183 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEENGSLERTSLFLN 242

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 243 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 302

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 303 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ 362

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L+  G YPP++ L S+SRL   A
Sbjct: 363 LSNRGIYPPINVLPSLSRLMKSA 385


>gi|254361679|ref|ZP_04977816.1| H(+)-transporting two-sector ATPase, (F1) alpha subunit [Mannheimia
           haemolytica PHL213]
 gi|261491749|ref|ZP_05988329.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261495501|ref|ZP_05991948.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153093201|gb|EDN74212.1| H(+)-transporting two-sector ATPase, (F1) alpha subunit [Mannheimia
           haemolytica PHL213]
 gi|261308835|gb|EEY10091.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261312588|gb|EEY13711.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 513

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 159/336 (47%), Gaps = 26/336 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGEIQNDGFSPIEVIA--PGVIDRQSVDQPVQTGYKAVDSMVPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERASRVNADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESGLFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGGIRTALAQY 400

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +   +D    K +     + + LKQ
Sbjct: 401 ---RELAAFAQFASDLDEATRKQLSHGQKVTELLKQ 433


>gi|313665255|ref|YP_004047126.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50]
 gi|312950021|gb|ADR24617.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50]
          Length = 459

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 9/257 (3%)

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV--IISLVGERGRE 201
           +TGI+ ID F P+  G ++G+F G+G+GK+ L+   +F  ++ + K   I    GER RE
Sbjct: 124 ETGIKAIDFFIPIFKGFKLGIFGGAGVGKTVLMKEIIFNVNNKYKKTSNIFIGSGERSRE 183

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             E  ++    NL K S + V+  +ESP  R       VT AEY    K ++VLL +D+I
Sbjct: 184 GIELYDELTESNLMKNSTMFVSKMNESPGARMSIVPIGVTAAEYLRDVKKEDVLLFIDNI 243

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G+ P   GY +++ S++  + +R+   + + G IT+  +V +  D+
Sbjct: 244 YRFIQAENEVSATLGKKPSVGGYQSTLESDVANIQDRL--FKNKNGAITSFQTVFLPMDD 301

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
            +DP A +V + LD ++VL+R  A +   P  DPLAS S   D+     +    +  +  
Sbjct: 302 LSDPSAVAVFNHLDSNLVLSRDQAAKNILPAFDPLASSSSSVDETLIGKKHFNAIIEVKR 361

Query: 379 LIHRFEETRDIRLIGGY 395
           ++  +++  D+ LI G+
Sbjct: 362 ILKAYKDLEDVILILGF 378


>gi|50285563|ref|XP_445210.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524514|emb|CAG58114.1| unnamed protein product [Candida glabrata]
          Length = 509

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  IV +     G ++    + F     RI  S    GR+ +  G+P D   
Sbjct: 65  GQVLEVRGDRAIVQVFEGTSGIDVKKTTVEFTGQNMRIPVSEDTLGRIFDGSGRPTDNGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 125 KVFAEDY-LDINGSPINPYARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 183

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 184 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETARFFKQDFEENGSLERTSLFLN 243

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 244 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 303

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 304 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQISVDRQ 363

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 364 LYNKGVYPPINVLPSLSRLMKSA 386


>gi|146419983|ref|XP_001485950.1| vacuolar ATP synthase subunit B [Meyerozyma guilliermondii ATCC
           6260]
          Length = 513

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 158/327 (48%), Gaps = 19/327 (5%)

Query: 56  SDNLGQV--IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113
           S   GQV  +R +  IV +     G ++    + F     R++ S    GR+ +  G+PI
Sbjct: 60  SSRAGQVLEVRGSKAIVQVFEGTTGVDVKKTRVEFTGESMRLAVSEDMLGRIFDGSGRPI 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+ 
Sbjct: 120 DKGPKIFAEDY-LDINGSPINPYARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLP 178

Query: 174 KSTLLSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            + + +   R         D  D       ++ + +G      R F +D+  + +L+++ 
Sbjct: 179 HNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEENGSLERTS 238

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           + +  +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P
Sbjct: 239 LFLNLANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVP 298

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             RGYP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I 
Sbjct: 299 GRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIF 358

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA 364
           ++R L+  G YPP++ L S+SRL   A
Sbjct: 359 VDRLLSNRGIYPPINVLPSLSRLMKSA 385


>gi|5001575|gb|AAD37034.1|AF092108_1 ATP synthase beta subunit [Caulophyllum thalictroides]
          Length = 476

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 22/312 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N  G+P+D   +LG         I    P  +        F+TGI+V+D+  
Sbjct: 82  GATLGRIFNVXGEPVD---NLGPXXXXXXSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 138

Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212
           P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER RE  +   +    
Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMEXINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197

Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
            +         K  +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 198 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 258 QAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R
Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQR 375

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 376 YKELQDIIAILG 387


>gi|25808437|gb|AAN74345.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPVIMDRKSVHEPLQTGIKAIDALVPVGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|332084600|gb|EGI89794.1| ATP synthase F1, alpha subunit [Shigella boydii 5216-82]
          Length = 513

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLDHDGFSA-VEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|149384517|gb|ABR25081.1| ATP synthase beta chain [Dryopteris goldiana]
          Length = 426

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 151/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG      +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVLSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|119511018|ref|ZP_01630139.1| H(+)-transporting ATP synthase, subunit alpha [Nodularia spumigena
           CCY9414]
 gi|119464363|gb|EAW45279.1| H(+)-transporting ATP synthase, subunit alpha [Nodularia spumigena
           CCY9414]
          Length = 516

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 11/323 (3%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           + D LG    ++ + + +  +G  + ++ G  V   GR    P      GRV+N  G+ +
Sbjct: 61  SGDILGIAFNLDANEIGVILLGNSQHLAAGQEVQRTGRVLDVPVGEGLLGRVLNVTGQAL 120

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D   ++   +    +  +    M+R  V    +TGI+V+D   P+  GQR  +     IG
Sbjct: 121 DNQGAIQVTE-RRPVERQAAAIMDRAPVTIPLQTGIKVVDALVPIGRGQRELIVGDRQIG 179

Query: 174 KSTLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           K+ + +    +     VI     +G+R   V + I D    N +  ++VVVA+ ++ P L
Sbjct: 180 KTAIATDTIINQKQQNVICIYCAIGKRASSVAKVIADLRQHNAMDYTIVVVASGEDPPGL 239

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + + P  A TIAEYF  KG +VL++ D +T  A + RE++      P    YP  +F   
Sbjct: 240 QYITPYAATTIAEYFMEKGRDVLIVYDDLTHHAWAYRELSLLLRRPPGREAYPGDIFYIH 299

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  V     N +  I  ++ SI DG I L+  L ++G  
Sbjct: 300 SRLLERATHLRAELGGGSLTALPIVETQAQNLSAYIPTNLISITDGQIYLSPDLFQKGVL 359

Query: 349 PPVDPLASVSRLADK----AWSA 367
           P VD   SVSR+  K    A+SA
Sbjct: 360 PAVDVGKSVSRVGGKTQLPAYSA 382


>gi|3023348|sp|O03080|ATPB_PTEES RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1934710|gb|AAB51742.1| ATP synthase beta chain [Pteridium esculentum]
          Length = 473

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P  +        F+TGI+V+D+  P  
Sbjct: 107 LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLSAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 164 RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKVIN 223

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P        TA T+AEYF      +VL  +D I RF  +  
Sbjct: 224 EQNISESKVALVYGQMNEPPGASMRVGSTASTMAEYFRDVNKQDVLPFIDYILRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +     R++E
Sbjct: 342 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTSQRYKE 400

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 401 LQDIIAILG 409


>gi|145528251|ref|XP_001449925.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417514|emb|CAK82528.1| unnamed protein product [Paramecium tetraurelia]
          Length = 522

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 169/373 (45%), Gaps = 22/373 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G  + +  D V I  +G   EI  GD+V   G     P      GRV +ALG PIDG   
Sbjct: 83  GMALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGP 142

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           + K +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+   
Sbjct: 143 V-KTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIA 201

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESP 228
             T+++     D  DK      I   +G++    R  + + LG  +K ++VV AT+ E+ 
Sbjct: 202 IDTIINQKPNFDSGDKNKQLYCIYVAIGQK----RSTVANLLG-AMKYTIVVAATASEAA 256

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +   I EYF   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 257 PLQYLAPYSGCAIGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 316

Query: 289 ELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E GN  +TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 317 LHSRLLERAAKLNAENGNGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFKG 376

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K +   L   + ++   R++     +   +D    + 
Sbjct: 377 IRPAINVGLSVSRVGSAAQIKAMKTVAGRLKLELAQY---REVAAFAQFGSDLDAATQQL 433

Query: 407 VHQVPIIYDFLKQ 419
           +++   + + LKQ
Sbjct: 434 LNRGAQLTELLKQ 446


>gi|15594439|ref|NP_212227.1| V-type ATP synthase subunit B [Borrelia burgdorferi B31]
 gi|195941831|ref|ZP_03087213.1| V-type ATP synthase subunit B [Borrelia burgdorferi 80a]
 gi|216264350|ref|ZP_03436342.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi 156a]
 gi|218249672|ref|YP_002374621.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi ZS7]
 gi|221217361|ref|ZP_03588832.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi 72a]
 gi|223889115|ref|ZP_03623704.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi 64b]
 gi|224532534|ref|ZP_03673158.1| V-type ATP synthase beta chain [Borrelia burgdorferi WI91-23]
 gi|224533968|ref|ZP_03674552.1| V-type ATP synthase beta chain [Borrelia burgdorferi CA-11.2a]
 gi|225549207|ref|ZP_03770180.1| V-type ATP synthase beta chain [Borrelia burgdorferi 94a]
 gi|225549686|ref|ZP_03770651.1| V-type ATP synthase beta chain [Borrelia burgdorferi 118a]
 gi|226321996|ref|ZP_03797521.1| V-type ATP synthase beta chain [Borrelia burgdorferi Bol26]
 gi|12585415|sp|O51120|VATB_BORBU RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|226732462|sp|B7J126|VATB_BORBZ RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|2687980|gb|AAC66484.1| V-type ATPase, subunit B (atpB) [Borrelia burgdorferi B31]
 gi|215980823|gb|EEC21630.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi 156a]
 gi|218164860|gb|ACK74921.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi ZS7]
 gi|221192639|gb|EEE18855.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi 72a]
 gi|223885364|gb|EEF56465.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi 64b]
 gi|224512524|gb|EEF82901.1| V-type ATP synthase beta chain [Borrelia burgdorferi WI91-23]
 gi|224512804|gb|EEF83171.1| V-type ATP synthase beta chain [Borrelia burgdorferi CA-11.2a]
 gi|225369646|gb|EEG99094.1| V-type ATP synthase beta chain [Borrelia burgdorferi 118a]
 gi|225370065|gb|EEG99505.1| V-type ATP synthase beta chain [Borrelia burgdorferi 94a]
 gi|226232586|gb|EEH31340.1| V-type ATP synthase beta chain [Borrelia burgdorferi Bol26]
 gi|312147867|gb|ADQ30526.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi JD1]
 gi|312149102|gb|ADQ29173.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           burgdorferi N40]
          Length = 434

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    +S  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGVSTSDEIKFLGHSMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPRDGGPSLD--DNLIEIGG--PSANPTKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLIRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ KG  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRAIFFVHTANDSVVESLTVPDISLSVAEKFALKGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITILAVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ S+  L    +E+ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNSRTRDDHRTIMDSMIKLYASSKESVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|291556551|emb|CBL33668.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium siraeum
           V10Sc8a]
          Length = 501

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 160/346 (46%), Gaps = 11/346 (3%)

Query: 57  DNLGQVIRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           +N  + + +NL+  ++  V +G   EI  GD V   G     P      GRV+NALG+PI
Sbjct: 56  ENGVRCMALNLEQDFVGAVMLGSDAEIKEGDTVKRTGSVVSVPVGEELLGRVVNALGQPI 115

Query: 114 DGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           DG  + L K    +E ++  P  + R+ V    +TGI+ ID   P+  GQR  +      
Sbjct: 116 DGKGAILAKETRPIEKIA--PGIITRKSVNVPLQTGIKAIDSMIPIGRGQRELIIGDRQT 173

Query: 173 GKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           GK+ + +         D + I + +G++   V   +E       +  ++VV AT+ E   
Sbjct: 174 GKTAIAIDTIINQKKTDVICIYVAIGQKASTVANVVEQLTAAGAMDYTIVVSATASELAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  KG + L+I D +++ A + R ++      P    YP  VF  
Sbjct: 234 LQYIAPYSGCTMGEYFMEKGKDALIIYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER     +    G++TA+  +     + +  I  +V SI DG I L   L   G 
Sbjct: 294 HSRLLERAANLNENYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGV 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            P V+P  SVSR+   A     KK+  +L     +F E +     G
Sbjct: 354 RPAVNPGISVSRVGGNAQIKAMKKVSGTLKLEYSQFRELQSFSQFG 399


>gi|242241385|ref|YP_002989566.1| F0F1 ATP synthase subunit alpha [Dickeya dadantii Ech703]
 gi|242133442|gb|ACS87744.1| ATP synthase F1, alpha subunit [Dickeya dadantii Ech703]
          Length = 513

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPIDNDGFS-PVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIVKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|190345606|gb|EDK37523.2| vacuolar ATP synthase subunit B [Meyerozyma guilliermondii ATCC
           6260]
          Length = 513

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 158/327 (48%), Gaps = 19/327 (5%)

Query: 56  SDNLGQV--IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113
           S   GQV  +R +  IV +     G ++    + F     R++ S    GR+ +  G+PI
Sbjct: 60  SSRAGQVLEVRGSKAIVQVFEGTTGVDVKKTRVEFTGESMRLAVSEDMLGRIFDGSGRPI 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+ 
Sbjct: 120 DKGPKIFAEDY-LDINGSPINPYARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLP 178

Query: 174 KSTLLSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSV 218
            + + +   R         D  D       ++ + +G      R F +D+  + +L+++ 
Sbjct: 179 HNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEENGSLERTS 238

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           + +  +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P
Sbjct: 239 LFLNLANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVP 298

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             RGYP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I 
Sbjct: 299 GRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIF 358

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA 364
           ++R L+  G YPP++ L S+SRL   A
Sbjct: 359 VDRLLSNRGIYPPINVLPSLSRLMKSA 385


>gi|167750155|ref|ZP_02422282.1| hypothetical protein EUBSIR_01124 [Eubacterium siraeum DSM 15702]
 gi|167656898|gb|EDS01028.1| hypothetical protein EUBSIR_01124 [Eubacterium siraeum DSM 15702]
          Length = 501

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 160/346 (46%), Gaps = 11/346 (3%)

Query: 57  DNLGQVIRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           +N  + + +NL+  ++  V +G   EI  GD V   G     P      GRV+NALG+PI
Sbjct: 56  ENGVRCMALNLEQDFVGAVMLGSDAEIKEGDTVKRTGSVVSVPVGEELLGRVVNALGQPI 115

Query: 114 DGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           DG  + L K    +E ++  P  + R+ V    +TGI+ ID   P+  GQR  +      
Sbjct: 116 DGKGAILAKETRPIEKIA--PGIITRKSVNVPLQTGIKAIDSMIPIGRGQRELIIGDRQT 173

Query: 173 GKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           GK+ + +         D + I + +G++   V   +E       +  ++VV AT+ E   
Sbjct: 174 GKTAIAIDTIINQKKTDVICIYVAIGQKASTVANVVEQLTAAGAMDYTIVVSATASELAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  KG + L+I D +++ A + R ++      P    YP  VF  
Sbjct: 234 LQYIAPYSGCTMGEYFMEKGKDALIIYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER     +    G++TA+  +     + +  I  +V SI DG I L   L   G 
Sbjct: 294 HSRLLERAANLNENYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGV 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            P V+P  SVSR+   A     KK+  +L     +F E +     G
Sbjct: 354 RPAVNPGISVSRVGGNAQIKAMKKVSGTLKLEYSQFRELQSFSQFG 399


>gi|75279623|sp|O99015|ATPA_PROWI RecName: Full=ATP synthase subunit alpha, plastid; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|4469303|emb|CAB38453.1| ATP synthase CF1 alpha chain [Prototheca wickerhamii]
          Length = 506

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 157/344 (45%), Gaps = 25/344 (7%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           + +G  + +    V +  +G G  I  G  V   G+  +I   A + GRV+N L  PIDG
Sbjct: 59  NTIGIALNLETKSVGVVLMGDGTTIQEGSFVRATGKIAQIPVGAAFLGRVVNPLALPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K D++  I S  P  + R+ + +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 KGEI-KSDINRIIESPAPGIICRRSIHEPLQTGILAIDSMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSDCFDKVI----------ISLVGERGREVREFIEDYLGDN--LKKSVVVVAT 223
            +        C D +I             +G++   + + + + L +   L+ +++V AT
Sbjct: 178 AI--------CIDTIINQKGKNIVCVYVAIGQKASSIAQVV-NILQERGALEYTIIVAAT 228

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +D    L+ +AP    T+AE+F   G + L+I D +T+ A + REI+      P    YP
Sbjct: 229 ADSPATLQYLAPYAGATLAEFFMYNGQHTLIIYDDLTKQAQAYREISLLLRRPPGREAYP 288

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++   G++TA+  V     + +  I  +V SI DG I L+  
Sbjct: 289 GDVFYLHSRLLERAAKLNEKLGGGSMTALPVVETQEGDISAYIPTNVISITDGQIFLSAD 348

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L      P ++   SVSR+   A     K++   L   + +F E
Sbjct: 349 LFNANVRPAINVGVSVSRVGSAAQPKAMKQVAGKLKLELAQFAE 392


>gi|326328130|gb|ADZ54132.1| ATP synthase beta subunit [Bradyrhizobium japonicum]
          Length = 234

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 117/221 (52%), Gaps = 17/221 (7%)

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE 207
             P   G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE
Sbjct: 1   LAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIE 60

Query: 208 DYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
             +  +          K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I
Sbjct: 61  SKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+
Sbjct: 121 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             DP   +  + LD   VL+R+++E+G YP VDPL S SR+
Sbjct: 179 LTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRM 219


>gi|302338960|ref|YP_003804166.1| H+transporting two-sector ATPase alpha/subunit beta central region
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636145|gb|ADK81572.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Spirochaeta smaragdinae DSM 11293]
          Length = 431

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 171/360 (47%), Gaps = 10/360 (2%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +  V   D  V   ++ D+L  VIR++ D V +     G  IS GD V   G   +
Sbjct: 16  ITVKADGVRYDDLAVVSSRHGDSLANVIRLDGDRVSLQVFTGGRGISTGDEVRFLGHPMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           IS S    GR+    GKP D    L +  + +   S V PA  R       +TGI +ID+
Sbjct: 76  ISYSENLLGRIFTGSGKPRDNGPELNENLIDIGGPS-VNPA-KRIIPRNMIRTGIPMIDL 133

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDN 213
           F  L   Q++ +F+ SG   + LL+  A     D +I+  +G +  +   F E    G  
Sbjct: 134 FNTLVESQKLPIFSVSGEPYNELLARIAMQAEVDLIILGGMGLKYDDYLYFKETLESGGA 193

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           + +++  V T+ +  +   + P  A+ +AE F+ +G  VL++L  +T FA +++E++   
Sbjct: 194 MSRTIFFVHTAADPIVECLLVPDIALAVAEKFALEGKKVLVLLSDMTNFADALKEMSITM 253

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
            ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   I +
Sbjct: 254 EQVPSNRGYPGDLYSQLASRYEKAVDFEG-SGSITILAVTTMPGDDVTHPVPDNTGYITE 312

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G   L     + GR  P   L+ + +  +K    D + L+  +  L   ++E+ + R +G
Sbjct: 313 GQYYL-----KGGRIEPFGSLSRLKQSVNKDTREDHRALMDGMIKLYAAYKESLEKRSMG 367


>gi|166836570|gb|ABY90517.1| ATP synthase beta chain [Salvinia molesta]
          Length = 382

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 97  GNDLYIEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEK 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W    +  
Sbjct: 215 VYVPADDLTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 273

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 274 DTAQGVKETLQRYKELQDIIAI----PGLD 299


>gi|319935016|ref|ZP_08009459.1| V-type sodium ATPase [Coprobacillus sp. 29_1]
 gi|319810034|gb|EFW06403.1| V-type sodium ATPase [Coprobacillus sp. 29_1]
          Length = 482

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 136/269 (50%), Gaps = 14/269 (5%)

Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GRV +  GKPIDG   LG+   + SM+I       + R        TGI  ID  T L  
Sbjct: 87  GRVFSGAGKPIDG---LGEIYAEKSMDINGLPLNPVARIYPRNYINTGISSIDCLTTLIR 143

Query: 161 GQRIGVFAGSGIGKSTL-LSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+GSG+  + L + +  ++   D       V+ + +G        F   +    
Sbjct: 144 GQKLPIFSGSGLPHNQLAVQIVKQAKVADDEGKGFGVVFAAMGVTNDVAEYFRRSFEEAG 203

Query: 214 LKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
           + + VV+       PI+ R + P  A+T AEY + + D ++L+I   +T +  ++RE ++
Sbjct: 204 VMQRVVMFLNLSNDPIIERILTPRCALTAAEYLAFEHDMHILVIYTDVTSYCEALREFSS 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE+P  +GYP  ++S+L  L ER G +   KG++T +  + +  ++   P+ D    I
Sbjct: 264 SKGEIPGRKGYPGYLYSDLASLYERAGIANSAKGSVTQIPILTMPNNDITHPVPDLTGYI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +G I L+  L   G YPPV  L S+SRL
Sbjct: 324 TEGQITLDSELNAMGIYPPVSVLPSLSRL 352


>gi|224534850|ref|ZP_03675419.1| V-type ATP synthase beta chain [Borrelia spielmanii A14S]
 gi|224513790|gb|EEF84115.1| V-type ATP synthase beta chain [Borrelia spielmanii A14S]
          Length = 434

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    +S  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGVSTSDEIKFLGHSMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPRDGGPSLD--DSLIEIGG--PSANPTKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLVRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ KG  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRTIFFVHTANDSVVESLTVPDISLSVAEKFALKGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITILAVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ ++  L    +E+ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNSKTRDDHRAIMDTMIKLYASSKESVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|292490162|ref|YP_003533057.1| ATP synthase F1 subunit alpha [Erwinia amylovora CFBP1430]
 gi|292901164|ref|YP_003540533.1| ATP synthase subunit alpha [Erwinia amylovora ATCC 49946]
 gi|291201012|emb|CBJ48151.1| ATP synthase alpha subunit [Erwinia amylovora ATCC 49946]
 gi|291555604|emb|CBA24224.1| ATP synthase F1, alpha subunit [Erwinia amylovora CFBP1430]
          Length = 513

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 146/300 (48%), Gaps = 19/300 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGAPIDGKGAIDNDGFSPIEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+ +   ++  + D   K +   +G++   +   +      N L  ++
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTI 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+++      P 
Sbjct: 223 VVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER              G  + + G++TA+  +     + +  + 
Sbjct: 283 REAFPGDVFYLHSRLLERASRVSADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVP 342

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 343 TNVISITDGQIFLETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|133917200|emb|CAJ33241.1| ATP synthase alpha subunit [Lactobacillus amylolyticus DSM 11664]
          Length = 367

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 163/351 (46%), Gaps = 28/351 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           G + + Q   ++++G +I  N D           +I  GD V   G+  R+       GR
Sbjct: 19  GSYGIAQNLEANDVGIIILGNFD-----------DIREGDRVKRTGQIMRVPVGDALIGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M+RQ V++  +TGI+ ID   P+  GQR 
Sbjct: 68  VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMDRQSVDEPLQTGIKAIDALVPIGKGQRE 126

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------ 216
            +      GK++L +         D + I + VG++   VR  +E      LK+      
Sbjct: 127 LIIGDRKTGKTSLAIDTILNQKGKDVICIYVSVGQKESTVRTQVE-----TLKRFGAMDY 181

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 182 TIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRP 241

Query: 277 PVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG
Sbjct: 242 PGREAYPGDVFYLHSRLLERSAKLSDKLGGGSMTALPFIQTEAGDISAYIPTNVISITDG 301

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E
Sbjct: 302 QIFLRSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRE 352


>gi|111114915|ref|YP_709533.1| V-type ATP synthase subunit B [Borrelia afzelii PKo]
 gi|216263953|ref|ZP_03435947.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           afzelii ACA-1]
 gi|123047070|sp|Q0SP71|VATB_BORAP RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|110890189|gb|ABH01357.1| V-type ATPase, subunit B [Borrelia afzelii PKo]
 gi|215979997|gb|EEC20819.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Borrelia
           afzelii ACA-1]
          Length = 434

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    +S  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGVSTSDEIKFLGHTMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPRDGGPSLD--DNLIEIGG--PSANPTKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLVRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ KG  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRTIFFVHTANDSVVESLTVPDISLSVAEKFALKGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITILAVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ ++  L    +E+ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNSKTRDDHRTIMDTMIKLYASSKESVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|323388525|gb|ADX60548.1| ATP synthase beta subunit [Pappea capensis]
          Length = 323

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+      G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 16  FETGIKVVDLLXXYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 75

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 76  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 135

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 136 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 193

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 194 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 253

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 254 TAQRVKQTLQRYKELQDIIAILG 276


>gi|295809870|emb|CBL85111.1| alpha subunit of ATPase [Vibrio tapetis]
 gi|295809872|emb|CBL85112.1| alpha subunit of ATPase [Vibrio tapetis]
 gi|295809874|emb|CBL85113.1| alpha subunit of ATPase [Vibrio tapetis]
 gi|295809876|emb|CBL85114.1| alpha subunit of ATPase [Vibrio tapetis]
          Length = 385

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 21/303 (6%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV+N LG+PIDG   + +  LS  I    P  + R+ V++  +TG + +D   P+  
Sbjct: 56  LLGRVVNTLGEPIDGKGPI-EAKLSSPIEVIAPGVIARKSVDQPVQTGYKAVDSMIPIGR 114

Query: 161 GQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLK 215
           GQR  +     IGK+ L   S+  + D     I   +G++   +   +   E++    L 
Sbjct: 115 GQRELIIGDRQIGKTALAIDSIINQRDSGIFSIYVAIGQKASTIANVVRKLEEH--GALA 172

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+     
Sbjct: 173 NTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKR 232

Query: 276 LPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHND 322
            P    YP  VF    RLLER              G  + + G++TA+  +     + + 
Sbjct: 233 PPGREAYPGDVFYLHSRLLERAARVSEAYVEAFTNGEVKGKTGSLTALPIIETQAGDVSA 292

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + +
Sbjct: 293 FVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIVKKLSGGIRTALAQ 352

Query: 383 FEE 385
           + E
Sbjct: 353 YRE 355


>gi|50294700|ref|XP_449761.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529075|emb|CAG62739.1| unnamed protein product [Candida glabrata]
          Length = 543

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 176/363 (48%), Gaps = 25/363 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G++V   G+    P      GRV++ALG PIDG    +S+G    +     K P  + R+
Sbjct: 120 GEIVKRTGKIVDVPVGPGLLGRVVDALGNPIDGKGPIESVG----TARAQVKAPGILPRR 175

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    +D  D+     
Sbjct: 176 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNDGNDESKKLY 235

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   +G++   V + ++     D LK S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 236 CVYVAIGQKRSTVAQLVQTLEQHDALKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDN 295

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    S+KE  G+
Sbjct: 296 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKEGAGS 355

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 356 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 415

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLS 425
              K++  SL   + ++   R++     +   +D    + + +   +   LKQS  S L+
Sbjct: 416 KALKQVAGSLKLFLAQY---REVAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQYSPLA 472

Query: 426 SED 428
           +E+
Sbjct: 473 AEE 475


>gi|83319416|ref|YP_424343.1| F0F1 ATP synthase subunit beta [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|83283302|gb|ABC01234.1| ATP synthase F1, beta subunit [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 459

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 9/257 (3%)

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV--IISLVGERGRE 201
           +TGI+ ID F P+  G ++G+F G+G+GK+ L+   +F  ++ + K   I    GER RE
Sbjct: 124 ETGIKAIDFFIPIFKGFKLGIFGGAGVGKTVLMKEIIFNVNNKYKKTSNIFIGSGERSRE 183

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             E  ++    NL K S + V+  +ESP  R       VT AEY    K ++VLL +D+I
Sbjct: 184 GIELYDELTESNLMKNSTMFVSKMNESPGARMSIVPIGVTAAEYLRDVKKEDVLLFIDNI 243

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G+ P   GY +++ S++  + +R+   + + G IT+  +V +  D+
Sbjct: 244 YRFIQAENEVSATLGKKPSVGGYQSTLESDVANIQDRL--FKNKNGAITSFQTVFLPMDD 301

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
            +DP A +V + LD ++VL+R  A +   P  DPLAS S   D+     +    +  +  
Sbjct: 302 LSDPSAVAVFNHLDSNLVLSRDQAAKNILPAFDPLASSSSSVDETLIGKKHFNAIIEVKR 361

Query: 379 LIHRFEETRDIRLIGGY 395
           ++  +++  D+ LI G+
Sbjct: 362 ILKAYKDLEDVILILGF 378


>gi|52788842|gb|AAU87391.1| ATP synthase beta chain [Leptopteris wilkesiana]
          Length = 383

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 148/307 (48%), Gaps = 20/307 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N  G+P+D    +     S  I    P +          +TGI+V+D+  P   G 
Sbjct: 8   GRISNVPGEPVDNSGPVDTSTTS-PIHRSAPASTQSDTKLSISETGIKVVDLSAPYRRGG 66

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214
           +IG+F G+G+GK+  +    +  A++     V   +  ER RE  +   +     +    
Sbjct: 67  KIGLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQ 125

Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
                K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 126 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 185

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 186 SALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTL 243

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387
           +  D   VL R LA +G YP VDPL S   +  + W   E+  +    +   + R++E +
Sbjct: 244 AHSDATTVLPRGLAAKGIYPAVDPLDSTPTML-QPWIVGEEHYETAQGVKQTLQRYKEPQ 302

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 303 DIIAILG 309


>gi|33241053|ref|NP_875995.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81664009|sp|Q7VA63|ATPA_PROMA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33238582|gb|AAQ00648.1| ATP synthase alpha chain [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 505

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 158/331 (47%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE + +  G  V   G+    P      GRV+N LG+P+DG+  +
Sbjct: 63  IALNLEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGDAMLGRVVNPLGQPVDGNGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-L 178
              D S  I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ + +
Sbjct: 123 ATSD-SRLIESLAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAI 181

Query: 179 SMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
                    D V + + VG++   V + +E       L+ ++VV A++ E+  L+ +AP 
Sbjct: 182 DTIINQKGQDVVCVYVAVGQKSASVAQVVEVLREKGALEYTIVVNASASEAAALQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAAIAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKLSDAMGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A +   KK+  +L   + +F+E
Sbjct: 362 ISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|25808479|gb|AAN74366.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + RE++      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|149384849|gb|ABR25233.1| ATP synthase beta chain [Diplazium cristatum]
          Length = 426

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ NALG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRIFNALGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK T+L+M + ++         +   VGER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGK-TVLTMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +V L +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLSIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD     +R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTAPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|88807381|ref|ZP_01122893.1| ATP synthase subunit A [Synechococcus sp. WH 7805]
 gi|88788595|gb|EAR19750.1| ATP synthase subunit A [Synechococcus sp. WH 7805]
          Length = 506

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 170/367 (46%), Gaps = 14/367 (3%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE + +  G  V   G+    P      GRV+N LG P+DG   L
Sbjct: 63  IALNLEDDNVGAVLMGEGLGIQEGSTVRATGKIASVPVGDGLLGRVVNPLGVPLDGKGDL 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
           G  + S  I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +  
Sbjct: 123 GASE-SRLIESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAI 181

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAP 235
            ++  + D     +   +G++   V +  E  L +   L  +V+V A + +   L+ +AP
Sbjct: 182 DTILNQKDQDVVCVYVAIGQKAASVAQVTE-VLRERGALDYTVIVAANASDPAALQYLAP 240

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T  +IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLE
Sbjct: 241 YTGASIAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLE 300

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R         KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++ 
Sbjct: 301 RAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINV 360

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A +   KK+  +L   + +F+E   +     +   +D    K + +   +
Sbjct: 361 GISVSRVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQKQLGRGKRL 417

Query: 414 YDFLKQS 420
            + LKQS
Sbjct: 418 RELLKQS 424


>gi|188535585|ref|YP_001909382.1| F0F1 ATP synthase subunit alpha [Erwinia tasmaniensis Et1/99]
 gi|259910318|ref|YP_002650674.1| F0F1 ATP synthase subunit alpha [Erwinia pyrifoliae Ep1/96]
 gi|226739884|sp|B2VCA6|ATPA_ERWT9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|188030627|emb|CAO98523.1| ATP synthase, F1 complex, alpha subunit [Erwinia tasmaniensis
           Et1/99]
 gi|224965940|emb|CAX57473.1| ATP synthase, F1 complex, alpha subunit [Erwinia pyrifoliae Ep1/96]
 gi|283480441|emb|CAY76357.1| ATP synthase F1, alpha subunit [Erwinia pyrifoliae DSM 12163]
 gi|310765898|gb|ADP10848.1| F0F1 ATP synthase subunit alpha [Erwinia sp. Ejp617]
          Length = 513

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 146/300 (48%), Gaps = 19/300 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGAPIDGKGAIDNDGFSPIEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+ +   ++  + D   K +   +G++   +   +      N L  ++
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTI 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+++      P 
Sbjct: 223 VVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER              G  + + G++TA+  +     + +  + 
Sbjct: 283 REAFPGDVFYLHSRLLERASRVSADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVP 342

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 343 TNVISITDGQIFLETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|168065770|ref|XP_001784820.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663617|gb|EDQ50372.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 477

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 141/274 (51%), Gaps = 14/274 (5%)

Query: 103 GRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  GKPID G   L +  L +   S  P    R   E+  +TGI  ID+   +  G
Sbjct: 101 GRIFNGSGKPIDNGPPILAEAYLDISGASINPS--ERTYPEEMIQTGISTIDVMNSIARG 158

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---------VIISLVGERGREVREFIEDYLGD 212
           Q+I +F+ +G+  + + +   + +   +         ++ + +G        F  D+  +
Sbjct: 159 QKIPLFSAAGLPHNEIAAQICQGENLLEDEPGEDNFCIVFAAMGVNMETATFFKRDFEEN 218

Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
            ++++  + +  +++  I R + P  A+T AEY++ + G +VL+IL  ++ +A ++RE++
Sbjct: 219 GSMERVTLFLNLANDPTIERIITPRIALTTAEYYAYECGKHVLVILTDMSSYADALREVS 278

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  ++++L  + ER G  E  KG+IT +  + +  D+   PI D    
Sbjct: 279 AAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPIPDLTGY 338

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 339 ITEGQIYVDRQLQNRQIYPPINVLPSLSRLMKSA 372


>gi|323388535|gb|ADX60553.1| ATP synthase beta subunit [Tristira triptera]
          Length = 319

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+      G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 12  FETGIKVVDLXXXXXRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 71

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 72  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 131

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 132 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 189

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 190 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 249

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 250 TAQRVKQTLQRYKELQDIIAILG 272


>gi|221103824|ref|XP_002160955.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 505

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 17/283 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           SA   GRV N  GKPID    +   D  ++IM +     +R   E+  +TGI  ID    
Sbjct: 119 SADMLGRVFNGSGKPIDKGPPVLAEDF-LDIMGQPINPWSRIYPEEMIQTGISAIDTMNS 177

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR--------------SDCFDKVIISLVGERGREVR 203
           +  GQ+I +F+ +G+  + + +   R              SD    ++ + +G      R
Sbjct: 178 IARGQKIPIFSAAGLPHNDIAAQICRQAGLVKHGKGTMDYSDDNFAIVFAAMGVNMETAR 237

Query: 204 EFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261
            F  D+  +   ++V +       P I R + P  A+T AEY + + + +VL+IL  ++ 
Sbjct: 238 FFKRDFEENGSMENVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLVILTDMSS 297

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +  D+  
Sbjct: 298 YAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDIT 357

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 358 HPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 400


>gi|153870822|ref|ZP_02000140.1| V-type ATPase subunit A [Beggiatoa sp. PS]
 gi|152072715|gb|EDN69863.1| V-type ATPase subunit A [Beggiatoa sp. PS]
          Length = 595

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 19/279 (6%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P  NR        TG R++D F PL  G +  +    G GK+ L    AR    D VI  
Sbjct: 202 PYQNRDHAVVPLLTGQRILDTFFPLLKGGKGAIPGPFGAGKTMLQHQIARWSNADIVIYV 261

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ + +E +        G +L +  +++A +   P++ + A +   VTIAEY+
Sbjct: 262 GCGERGNELVDILETFPELTDPHTGRSLMERTLLIANTSNMPVVAREASIYVGVTIAEYY 321

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE---K 302
              G +V+++ DS +R+A ++RE+    G++PV  GYP  + S L    ER G       
Sbjct: 322 RDLGYDVVMVADSTSRWAEALREVGGRLGQMPVEEGYPAYLASRLAAFYERAGRVTTLGN 381

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +K ++T + +V   G + ++P+    + I+     L++ LA+   YP +D   S S    
Sbjct: 382 QKASVTLIGAVSPPGGDFSEPVTSHTKEIVQTFWALSKELADARHYPSIDWNDSFSDYVG 441

Query: 363 KA--WSAD------EKKLVSSLTHLIHRFEETRDIRLIG 393
            A  W AD      ++    +L  L H  E  R + L+G
Sbjct: 442 IAQQWWADNIDSRWQEYRNEALKLLAHADELARIVNLVG 480


>gi|149384489|gb|ABR25067.1| ATP synthase beta chain [Paesia scaberula]
          Length = 426

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 148/309 (47%), Gaps = 18/309 (5%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V D   P  
Sbjct: 37  TTLGRISNVLGEPVDNLGPVQSG-TTFPIHRSAPAFTQLDTKLSIFETGIKVADPSAPYR 95

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 96  RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKVIN 155

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNILRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S ++ + W   E+  +    +     R++E
Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYETAQGVKQTSQRYKE 332

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 333 LQDIIAILG 341


>gi|269123792|ref|YP_003306369.1| ATP synthase F1, alpha subunit [Streptobacillus moniliformis DSM
           12112]
 gi|268315118|gb|ACZ01492.1| ATP synthase F1, alpha subunit [Streptobacillus moniliformis DSM
           12112]
          Length = 501

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 160/330 (48%), Gaps = 11/330 (3%)

Query: 65  INLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGK 121
           +NL+   +  V +GE   I  GD+V   GR    P+     GRV+N+LG+PIDG  ++  
Sbjct: 64  LNLEENSVGAVILGETRGIKEGDVVKGTGRITEVPAGEALLGRVVNSLGEPIDGKGNIVA 123

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--S 179
               M++       ++R+ V +  +TGI+ ID   P+  GQR  +      GK+++   +
Sbjct: 124 SKY-MQVERVASGIIDRKPVTEPLQTGIKAIDGMIPIGRGQRELIIGDRQTGKTSIAIDT 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLT 237
           +  + D     I   +G++ R     I+  L +   ++ + +V AT+ E   L+ +AP  
Sbjct: 183 IINQKDTGIYCIYVAIGQK-RSTVASIQRKLEEAGAMEYTTIVAATASEPAPLQYLAPYA 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            V +AEYF  +G +VL+I D +++ A S RE++      P    YP  VF    RLLER 
Sbjct: 242 GVAMAEYFMEEGKHVLIIYDDLSKHAVSYREMSLLLKRPPGREAYPGDVFYLHSRLLERA 301

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   
Sbjct: 302 AKLSDELGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLETDLFNSGFRPAINAGF 361

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SVSR+   A     K++ S +   + ++ E
Sbjct: 362 SVSRVGGSAQIKAMKQVASKVKMELAQYTE 391


>gi|213026792|ref|ZP_03341239.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 507

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 99  GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 157

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 158 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 215

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 216 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 275

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 276 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 335

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 336 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 395

Query: 385 E 385
           E
Sbjct: 396 E 396


>gi|213406001|ref|XP_002173772.1| ATP synthase subunit alpha [Schizosaccharomyces japonicus yFS275]
 gi|212001819|gb|EEB07479.1| ATP synthase subunit alpha [Schizosaccharomyces japonicus yFS275]
          Length = 505

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 187/422 (44%), Gaps = 28/422 (6%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           YS   + + G++ S+      V+ LS  Q   L +F      +S   G  + + LD V  
Sbjct: 17  YSAAQLAESGHVLSVGDGIARVSGLSNVQAEELVEF------SSGIKGMALNLELDTVGC 70

Query: 73  CPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
              G  + +  GD+V   G     P      GRV++ LG+PIDG   L   +    +  K
Sbjct: 71  VLFGNDKLVREGDVVKRTGSIVDVPVGPELLGRVVDVLGQPIDGKGPLNAKE-RRRVQVK 129

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-----LSMFARSDC 186
            P  + R  V +  +TG++ ID   P+  GQR  +      GK+ +     L+    +D 
Sbjct: 130 APGILPRTSVCEPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIALDAILNQKRWNDG 189

Query: 187 FDK-----VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            D+      +   +G++   V +F++     D LK SV+V AT+ ES  L+ +AP +  +
Sbjct: 190 NDESKKLYCVYVAIGQKRSTVAQFVQKLEENDALKYSVIVAATASESAPLQYLAPFSGCS 249

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E+F   G + L+  D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 250 IGEWFRDNGKHSLICYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM 309

Query: 301 EKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +   G + +  I  +V SI DG + L   L  +G  P ++   SVS
Sbjct: 310 NPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQVFLESELFFKGIRPAINVGLSVS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG-YRPGVDLILDKAVHQVPIIYDFL 417
           R+   A     KK+   +   + ++ E       G    PG    LD+ +     + + L
Sbjct: 370 RVGSAAQVKAMKKVAGPIKLFLAQYREVASFAQFGSDLDPGTRATLDRGLR----LTELL 425

Query: 418 KQ 419
           KQ
Sbjct: 426 KQ 427


>gi|203284018|ref|YP_002221758.1| V-type ATPase, subunit B [Borrelia duttonii Ly]
 gi|203287561|ref|YP_002222576.1| V-type ATPase, subunit B [Borrelia recurrentis A1]
 gi|201083461|gb|ACH93052.1| V-type ATPase, subunit B [Borrelia duttonii Ly]
 gi|201084781|gb|ACH94355.1| V-type ATPase, subunit B [Borrelia recurrentis A1]
          Length = 435

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 171/361 (47%), Gaps = 12/361 (3%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T +++ V  G+  + + KN  +L +VI++  D V +        IS  D V   G   +
Sbjct: 18  ITVIAKSVKYGELAIVKSKNGSSLAEVIKLERDKVSLQVYNGTIGISTSDEVKFLGHPMQ 77

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           ++ S    GR+ +  G P DG   L   D  +EI         R       +TGI +ID+
Sbjct: 78  VTFSENLLGRIFDGAGNPKDGGPRLE--DNLIEIGGPSVNPAKRIVPRNMIRTGIPMIDV 135

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--GD 212
           F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  G 
Sbjct: 136 FNTLVESQKLPIFSVSGEPYNELLVRIALQAEVDLIILGGMGLKNDDYLTF-KDSLESGG 194

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +++  V T+++  +   + P  ++ +AE F+ +G  VL++L  +T FA +++EIA  
Sbjct: 195 ALSRTIFFVNTANDPVVESLIVPDISLAVAEKFALQGKKVLVLLTDMTNFADAMKEIAIT 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
             ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   I 
Sbjct: 255 MEQVPSNRGYPGDLYSQLASRYEKAIDFEG-AGSITVLAVTTMPGDDVTHPVPDNTGYIT 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           +G   L R     GR  P   L+ + ++ +     D + ++ S+  L     E+ + + +
Sbjct: 314 EGQYYLRR-----GRIEPFGSLSRLKQMVNGKTRDDHRTIMDSMIKLYASSRESIEKKAM 368

Query: 393 G 393
           G
Sbjct: 369 G 369


>gi|6017830|gb|AAF01649.1| ATP synthase beta subunit [Sabia swinhoei]
          Length = 491

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 29/365 (7%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  DN+GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 43  KGRDNVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMQVIDTGAPLSVPVGGATLGR 102

Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           + N LG+P+    +LG  D   +  I    P  +        F+TG + +D+  P   G 
Sbjct: 103 IFNVLGEPVX---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGSKGVDLLAPYRRGG 159

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213
           +IG+  G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 160 KIGLLGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 219

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++
Sbjct: 220 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 279

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 280 ALLGXMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVXVPADDLTDPAPATTFA 337

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389
             D   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI
Sbjct: 338 HXDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 397

Query: 390 RLIGG 394
             I G
Sbjct: 398 IAILG 402


>gi|14718138|gb|AAK72808.1| ATP synthase beta subunit [Monsonia emarginata]
          Length = 268

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 16/229 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 87

Query: 201 E----VREFIEDYLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E     +E  E  + ++ K    K  +V    +E P  R    LTA+T+AEYF      +
Sbjct: 88  EGNDLYKEMKESGVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQD 147

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ 
Sbjct: 148 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQ 205

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 206 AVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTM 254


>gi|25808471|gb|AAN74362.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808495|gb|AAN74374.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP   V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYAGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|149384597|gb|ABR25121.1| ATP synthase beta chain [Phanerophlebia nobilis]
          Length = 426

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 151/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSIATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VLL +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   V  R LA +G YP VDPL S S +  + W   E+       +   + R+
Sbjct: 272 ATTSAHLDATTVPPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|6625701|gb|AAF19360.1|AF188265_6 The ATP synthase subunit alpha [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 513

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLDHDGFSA-VEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  +   G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGRTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|11558456|emb|CAC17798.1| ATP synthase subunit B [Platycrater arguta]
          Length = 283

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 135/264 (51%), Gaps = 15/264 (5%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +IG+F 
Sbjct: 3   LGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFG 61

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV 219
           G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S V
Sbjct: 62  GAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKV 121

Query: 220 --VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
             V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 122 ALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDVLLFIDNIFRFVQAGSEVSALLGRM 181

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   
Sbjct: 182 PSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATT 239

Query: 337 VLNRSLAEEGRYPPVDPLASVSRL 360
           VL+R LA +G YP VDPL S S +
Sbjct: 240 VLSRGLAAKGIYPAVDPLDSTSTM 263


>gi|257456429|ref|ZP_05621625.1| V-type ATP synthase beta chain [Treponema vincentii ATCC 35580]
 gi|257446089|gb|EEV21136.1| V-type ATP synthase beta chain [Treponema vincentii ATCC 35580]
          Length = 439

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 180/365 (49%), Gaps = 20/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  ++ V  G+    Q     +L QV +++ D+V +     G  +S GD V   GR  +
Sbjct: 16  ITVKAEDVSYGELAQVQTSFGTSLAQVNKLDRDLVSLQVFAGGRGVSTGDEVRFLGREMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMN---RQRVEKGFKTGIR 150
           +S S    GR+ N  G+P D      +G +  + M ++  P++N   R   ++  +TGI 
Sbjct: 76  VSFSDDLLGRIFNGSGEPRD------QGPMLKDNMVEIGGPSVNPSKRIMAKRMIRTGIP 129

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           +ID+F  L   Q++ +F+ SG   + LL+  A     D +++  +G +  +   F +D L
Sbjct: 130 MIDVFNTLVVSQKLPIFSSSGEPYNELLARIAMQAEVDVIVLGGMGLKYDDYLYF-KDTL 188

Query: 211 GDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
            +   L ++V+ V T+ +  +   M P   + + E F+ KG +VL++L  +T FA +++E
Sbjct: 189 EEAGALSRTVMFVHTAADPTVECLMIPDMCLAVGEQFALKGKDVLVLLTDMTNFADAMKE 248

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           IA    ++P  RGYP  ++S+L    E+      + G++T +    + GD+   P+ D+ 
Sbjct: 249 IAIIQEQVPSNRGYPGDLYSQLAARYEK-AVDFDDAGSVTVLAVTTMPGDDVTHPVPDNT 307

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
             I +G   L     + GR  P   L+ + +  +     D + L+ ++  L   +++T +
Sbjct: 308 GYITEGQFYL-----KHGRIEPFGSLSRLKQNVNGKTREDHRALMDNMIKLYASYKDTLE 362

Query: 389 IRLIG 393
            + +G
Sbjct: 363 KKSMG 367


>gi|145295349|ref|YP_001138170.1| F0F1 ATP synthase subunit alpha [Corynebacterium glutamicum R]
 gi|158513591|sp|A4QDH1|ATPA_CORGB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|140845269|dbj|BAF54268.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 547

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 168/359 (46%), Gaps = 24/359 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 63  IGVAQNLEADRVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEAFLGRVINPLGQPIDGLG 122

Query: 118 SLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
            +  + D  +E+  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 123 EIASEEDRVLEL--QAPTVLERQPVEEPLATGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 180

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGREV---REFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G  +   R+ +E+     L+ + +V A 
Sbjct: 181 VCVDTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQ--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDAAGFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G+ITA+  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLSDDLGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           L   G  P ++   SVSR+   A +   KK+  SL   +  F   RD+     +   +D
Sbjct: 359 LFNRGIRPAINVGVSVSRVGGAAQTKGMKKVAGSLRLDLAAF---RDLEAFATFASDLD 414


>gi|158430150|pdb|2QE7|A Chain A, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430151|pdb|2QE7|B Chain B, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430152|pdb|2QE7|C Chain C, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|33329385|gb|AAQ10088.1| ATP synthase subunit alpha [Bacillus sp. TA2.A1]
          Length = 502

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 154/341 (45%), Gaps = 7/341 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G    +  D V +  +G   EI  G  V   GR    P      GRV+N LG+P+DG  
Sbjct: 60  MGMAQNLEEDNVGVVILGPYTEIREGTQVKRTGRIMEVPVGEALLGRVVNPLGQPLDGRG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +    I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+
Sbjct: 120 PIETAEYR-PIESPAPGVMDRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTI 178

Query: 178 -LSMFARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
            +         D + I + +G++   V   +E     D L  ++VV A++ E   L  +A
Sbjct: 179 AIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAPLLYLA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + EYF  KG + L++ D +++ A + RE++      P    YP  VF    RLL
Sbjct: 239 PYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      EK  G++TA+  +     + +  I  +V SI DG I L   L   G  P V+
Sbjct: 299 ERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGVRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              SVSR+   A     KK+  +L   + ++ E +     G
Sbjct: 359 VGISVSRVGGAAQIKAMKKVAGTLRLDLAQYRELQAFAQFG 399


>gi|78186932|ref|YP_374975.1| F0F1 ATP synthase subunit alpha [Chlorobium luteolum DSM 273]
 gi|115312226|sp|Q3B3Z9|ATPA1_PELLD RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|78166834|gb|ABB23932.1| ATP synthase F1, alpha subunit [Chlorobium luteolum DSM 273]
          Length = 511

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 168/374 (44%), Gaps = 20/374 (5%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD-DS 118
           I  N+D   +  V +GE  ++  G      GR    P      GRV+N LG+P+D + + 
Sbjct: 67  IAFNVDPDEVGVVLLGEYAKLQAGGRARRTGRVMDVPVGDGLLGRVVNPLGRPLDAEGEP 126

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
              G L +E  S  P  M+R  V    +TG++V+D   P+  GQR  +      GK+   
Sbjct: 127 RFSGRLPIERPS--PGIMDRNAVSTPLQTGLKVVDAIVPIGRGQRELILGDRQTGKTAIA 184

Query: 176 --TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPI-LRK 232
             T+L+   R+      I   +G+R   V + +            V V T    P  L+ 
Sbjct: 185 VATILNQKGRNVI---CIYCAIGQRASAVAKVLAQLREHGAMAHTVAVVTEGNDPSGLQY 241

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A +I EYF  +G +VL++ D +T  A + RE++      P    +P  +F    R
Sbjct: 242 IAPYAATSIGEYFMEQGRDVLIVYDDLTNHARAYRELSLLLKRPPGREAFPGDIFYVHSR 301

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     KE   G++TA+  +  +  N +  I  ++ SI DG I L+ +L E G  P 
Sbjct: 302 LLERSTHLRKELGGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPTLFELGNLPA 361

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+  KA  A  + +   L     +FEE  +    G     +D    KA+   
Sbjct: 362 VDIGKSVSRVGGKAQLAAYRSVTGRLKLAYAQFEELENFARFGTR---LDEASRKAITHG 418

Query: 411 PIIYDFLKQSPSDL 424
             I + LKQ   D+
Sbjct: 419 ERIRECLKQDELDV 432


>gi|312174355|emb|CBX82608.1| ATP synthase F1, alpha subunit [Erwinia amylovora ATCC BAA-2158]
          Length = 513

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 146/300 (48%), Gaps = 19/300 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGAPIDGKGAIDNDGFSPIEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+ +   ++  + D   K +   +G++   +   +      N L  ++
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTI 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+++      P 
Sbjct: 223 VVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER              G  + + G++TA+  +     + +  + 
Sbjct: 283 REAFPGDVFYLHSRLLERASRVSADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVP 342

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 343 TNVISITDGQIFLETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|166836572|gb|ABY90518.1| ATP synthase beta chain [Salvinia molesta]
          Length = 364

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 28  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 87

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 88  GNDLYIEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 147

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 148 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQA 205

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEK 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W    +  
Sbjct: 206 VYVPADDLTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 264

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 265 DTAQGVKETLQRYKELQDIIAI----PGLD 290


>gi|295425478|ref|ZP_06818171.1| ATP synthase F1 sector alpha subunit [Lactobacillus amylolyticus
           DSM 11664]
 gi|295064817|gb|EFG55732.1| ATP synthase F1 sector alpha subunit [Lactobacillus amylolyticus
           DSM 11664]
          Length = 506

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 163/351 (46%), Gaps = 28/351 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           G + + Q   ++++G +I  N D           +I  GD V   G+  R+       GR
Sbjct: 61  GSYGIAQNLEANDVGIIILGNFD-----------DIREGDRVKRTGQIMRVPVGDALIGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I SK P  M+RQ V++  +TGI+ ID   P+  GQR 
Sbjct: 110 VVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMDRQSVDEPLQTGIKAIDALVPIGKGQRE 168

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------ 216
            +      GK++L +         D + I + VG++   VR  +E      LK+      
Sbjct: 169 LIIGDRKTGKTSLAIDTILNQKGKDVICIYVSVGQKESTVRTQVE-----TLKRFGAMDY 223

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 224 TIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRP 283

Query: 277 PVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG
Sbjct: 284 PGREAYPGDVFYLHSRLLERSAKLSDKLGGGSMTALPFIQTEAGDISAYIPTNVISITDG 343

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E
Sbjct: 344 QIFLRSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRE 394


>gi|262341318|ref|YP_003284173.1| ATP synthase F1 subunit alpha [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272655|gb|ACY40563.1| ATP synthase F1 subunit alpha [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 527

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 174/398 (43%), Gaps = 36/398 (9%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
           N++  G V+ +  D V I  +   ++I  GD+V   G+ F I       GRV++ LG PI
Sbjct: 58  NTEVKGIVLNLEEDYVSIVLLNSSKDIKEGDVVQRTGKIFSIQVGEGMLGRVVDTLGNPI 117

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +     SM +  K P  + R+ V++  +TGI+ ID   P+  GQR  +      G
Sbjct: 118 DGKGPIEGKLFSMPLERKAPGVIYREPVKEPLQTGIKFIDSMIPIGRGQRELIIGDRQTG 177

Query: 174 KSTLL--SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDN--LKKSVVVVATS 224
           K+T+   ++  +   +++      I   V ++G  +   I + L +   +  +V+V ATS
Sbjct: 178 KTTIAIDAIINQKKFYEQNKPVYCIYVAVSQKGSTIAR-IANLLQEKGAMSYTVIVSATS 236

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   ++  AP +   I EYF   G + L+I D +++ A S REI+      P    YP 
Sbjct: 237 SDPASMQVFAPFSGTAIGEYFRDTGRSSLVIYDDLSKQAVSYREISLLLRRPPGREAYPG 296

Query: 285 SVFSELPRLLERIGPSEKEK--------------------GNITAVISVLVDGDNHNDPI 324
            VF    RLLER     K++                    G++TA+  +     + +  I
Sbjct: 297 DVFYLHSRLLERASKIIKDQKMAEKMNDIPESIRKEVKGGGSLTALPIIETQSGDISSYI 356

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L + L   G  P ++   SVSR+   A     +K+  +L     +F 
Sbjct: 357 PTNVISITDGQIFLEKDLFHSGIRPAINESISVSRVGGAAQIQSMRKVSGTLKLDQAQFR 416

Query: 385 ETRDIRLIGG-YRPGVDLILDKAVHQVPIIYDFLKQSP 421
           E       G    P    IL K    + I    LKQ P
Sbjct: 417 ELESFSKFGSELDPSTMEILKKGKINIEI----LKQPP 450


>gi|14717982|gb|AAK72733.1| ATP synthase beta subunit [Callicarpa dichotoma]
          Length = 283

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 139/266 (52%), Gaps = 19/266 (7%)

Query: 109 LGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRL 360
             VL+R LA +G YP VDPL S S +
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTM 262


>gi|154340667|ref|XP_001566290.1| vacuolar ATP synthase subunit B [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063609|emb|CAM39793.1| putative vacuolar ATP synthase subunit b [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 495

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 142/274 (51%), Gaps = 14/274 (5%)

Query: 103 GRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  G PID G   L +  L +E +   P A  R   E+  +TGI  ID+ T +  G
Sbjct: 118 GRIFNGSGIPIDNGPPVLPEQYLDVEGIPINPRA--RVYPEEMIQTGISSIDVMTSISRG 175

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---------VIISLVGERGREVREFIEDYLGD 212
           Q+I +F+G+G+  + + +   R     K         V+ + +G      R F  ++  +
Sbjct: 176 QKIPLFSGAGLPHNEIAAQIVRQSGLVKREGKTEDFCVVFAAMGVNQETARFFRTEFEQN 235

Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270
            +++K+V+ +  +++  I R + P  A+T AEY +   G +VL+IL  ++ +A ++RE++
Sbjct: 236 GSMEKTVLFLNLANDPTIERIITPRLALTTAEYLAYDCGKHVLVILTDMSSYADALREVS 295

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RG+P  ++++L  + ER G      G+IT +  + +  D+   PI D    
Sbjct: 296 AAREEVPGRRGFPGYMYTDLAHIYERAGRVLGRAGSITQIPILSMPNDDITHPIPDLTGY 355

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 356 ITEGQIYVDRQLHNRQLYPPINILPSLSRLMKNA 389


>gi|133917168|emb|CAJ33225.1| ATP synthase alpha subunit [Lactobacillus curvatus]
          Length = 355

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 18/346 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + V Q   ++++G +I           +G  E I  GD V   GR    P      GR
Sbjct: 7   GSYGVAQNLETNDVGIII-----------LGEYENIREGDQVKRTGRIMEVPVGDALIGR 55

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I  K P  M RQ V +  +TG++ ID   P+  GQR 
Sbjct: 56  VVNPLGQPVDGKGEI-KTDKTRPIEKKAPGVMARQSVSEPLQTGLKAIDALVPIGRGQRE 114

Query: 165 GVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
            +      GK+++   ++  + D     I   +G++   VR  +E           +VV 
Sbjct: 115 LIIGDRKTGKTSVAIDTIINQKDQDMICIYVAIGQKESTVRAQVETLRRYGAMDYTIVVE 174

Query: 223 TSDESPI-LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
                P  L  +AP     + E F   G +VL++ D +++ A + REI+      P    
Sbjct: 175 AGPSQPAPLLYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAAAYREISLLLRRPPGREA 234

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  +F    RLLER      E   G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 235 YPGDIFYLHSRLLERAAKLSDELGGGSMTALPIIETQAGDISAYIPTNVISITDGQIFLE 294

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             L   G  P +D  +SVSR+   A +   KK+  +L   +  + E
Sbjct: 295 SDLFYSGTRPAIDAGSSVSRVGGAAQTKAMKKVSGTLRLDLSSYRE 340


>gi|157368255|ref|YP_001476244.1| F0F1 ATP synthase subunit alpha [Serratia proteamaculans 568]
 gi|166990363|sp|A8G7M6|ATPA_SERP5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157320019|gb|ABV39116.1| ATP synthase F1, alpha subunit [Serratia proteamaculans 568]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFS-PVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  V      GK+ L   ++  + D   K +   +G++   +   +   E++    L  +
Sbjct: 164 RELVIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGQTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|25990327|gb|AAN76479.1| adenosine triphosphatase [Decaisnea fargesii]
          Length = 491

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 147/309 (47%), Gaps = 16/309 (5%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR+ N  G+P+D             I    P  +        F+TGI+V+D+  P 
Sbjct: 97  GATLGRIFNVXGEPVDXXXXXXX-XXXXPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 155

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211
             G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+        
Sbjct: 156 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 215

Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
              N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  + 
Sbjct: 216 NEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 275

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
            E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   
Sbjct: 276 SEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 333

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385
           +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +     R++E
Sbjct: 334 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKE 393

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 394 LQDIIAILG 402


>gi|238855949|ref|ZP_04646235.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 269-3]
 gi|260664666|ref|ZP_05865518.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii SJ-7A-US]
 gi|282934356|ref|ZP_06339623.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
 gi|313471883|ref|ZP_07812375.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 1153]
 gi|238831422|gb|EEQ23773.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 269-3]
 gi|239529201|gb|EEQ68202.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 1153]
 gi|260561731|gb|EEX27703.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii SJ-7A-US]
 gi|281301566|gb|EFA93843.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
          Length = 504

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 149/322 (46%), Gaps = 7/322 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 71  VGIIILGKYDNIREGDRVKRTGRIMEVPVGEALIGRVVNPLGQPVDGLGEI-KTDKTRPI 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK++L +         
Sbjct: 130 ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQ 189

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYF 245
           D + I + +G++   VR  +E           +VV     +P  L  +AP     + E F
Sbjct: 190 DVICIYVAIGQKESTVRSQVETLKRYGAMDYTIVVEAGPSAPAPLLYIAPYAGTAMGEEF 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-E 303
              G +VL++ D +++ A + RE++      P    YP  VF    RLLER    S+K  
Sbjct: 250 MYNGKDVLIVFDDLSKQAVAYRELSLLIRRPPGREAYPGDVFYIHSRLLERSAKLSDKLG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVSR+   
Sbjct: 310 GGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGASVSRVGGS 369

Query: 364 AWSADEKKLVSSLTHLIHRFEE 385
           A     KK+  +L   +  F E
Sbjct: 370 AQIKAMKKVAGTLRVDLASFRE 391


>gi|126022791|ref|NP_054917.2| ATP synthase CF1 alpha subunit [Spinacia oleracea]
 gi|114527|sp|P06450|ATPA_SPIOL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|15988216|pdb|1FX0|A Chain A, Crystal Structure Of The Chloroplast F1-Atpase From
           Spinach
 gi|20150923|pdb|1KMH|A Chain A, Crystal Structure Of Spinach Chloroplast F1-Atpase
           Complexed With Tentoxin
          Length = 507

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 157/334 (47%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  M+R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEITASE-SRLIESPAPGIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + + ++      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     KK+   L   + +F E
Sbjct: 359 NVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|65332612|gb|AAY42230.1| ATP synthase beta subunit [Anisophyllea pomifera]
          Length = 385

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 150/303 (49%), Gaps = 24/303 (7%)

Query: 109 LGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G ++G+
Sbjct: 2   LGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKVGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--------- 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+    K+S         
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGEXTREGNDLYM--EXKESGXXNXQXXX 116

Query: 218 ----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
                +V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++  
Sbjct: 117 ESXVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 176

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 177 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHL 234

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       +E  +    +   + R++E +DI  
Sbjct: 235 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 294

Query: 392 IGG 394
           I G
Sbjct: 295 ILG 297


>gi|47458330|gb|AAT27653.1| ATP synthase beta chain [Mycoplasma mobile 163K]
          Length = 784

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 162/303 (53%), Gaps = 26/303 (8%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLG---KGDLSMEIMSKVPPAMNRQRVEKG---FK 146
           + I  S    GRVI+ +GK +D  DS+     G++   +  +      R  V       +
Sbjct: 373 YAIKISKRLLGRVIDPIGKILD--DSIATPVHGNMYAPLEMQHDSEATRYVVSPKNAILE 430

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE 201
           TGI+VID+  P+  G + G+  G+G+GK+ ++      + F K      + + +GER RE
Sbjct: 431 TGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELI--NAFIKFHDGVSVFAGIGERIRE 488

Query: 202 VREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
             E  ++   LG  L K+  +    +ESP LR  + ++ V +AEYF +  G +VLL +D+
Sbjct: 489 GHELWKEAEALG-FLNKTAFIFGQMNESPGLRFRSGISGVKVAEYFRNNLGKSVLLFMDN 547

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I R+  +  EI++   + P A GY  ++FSE+ +L ERI  ++   G+IT++ ++ +  D
Sbjct: 548 IFRYVQAGSEISSLLEKTPSAVGYQPTLFSEMGQLQERINSTKD--GDITSIQAMYIPAD 605

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-----KKLV 373
           +  DP A +  +  D  I+L+R LA EG YP +DPL S S++    +++ E     KK V
Sbjct: 606 DFTDPAAVAAFAHFDSTIILSRQLAAEGVYPAIDPLESNSKMLSIKYTSREHLDIAKKTV 665

Query: 374 SSL 376
            +L
Sbjct: 666 QTL 668


>gi|309775241|ref|ZP_07670251.1| ATP synthase F1, alpha subunit [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916993|gb|EFP62723.1| ATP synthase F1, alpha subunit [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 506

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 9/331 (2%)

Query: 65  INLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGK 121
           +NL+  ++  V +G++  I  GD V   GR    P      GRV+NALG+ IDG + + K
Sbjct: 64  LNLEEEHVGAVLMGDDSNIREGDEVKRTGRIVEVPVGDGMLGRVVNALGQAIDGGEPI-K 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--S 179
            D    +    P  M R+ V +  +TG+++ID   P+  GQR  +      GK+ +   +
Sbjct: 123 SDKFRPVERVAPGVMTRKSVHQPIQTGLKIIDSMIPIGRGQRELIIGDRQTGKTAIAIDT 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           +  + +   K I   +G++   V + +E       ++ + +V +T+ E   L+ +AP   
Sbjct: 183 IINQKENNVKCIYVAIGQKASTVAQIVEKLRSHGAMEYTTIVSSTASEPAPLQYIAPYAG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             I E +   GD+VL++ D +++ A + R ++      P    YP  VF    RLLER  
Sbjct: 243 CAIGEEWMENGDDVLIVYDDLSKHAVAYRTMSLLLKRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               E   G++TA+  +     + +  I  +V SI DG I L   L   G  P VD   S
Sbjct: 303 KLNDELGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNSGVRPAVDSGLS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           VSR+   A     K++  SL   + +F E +
Sbjct: 363 VSRVGSAAQIKAMKQVSGSLKLELAQFREMQ 393


>gi|292490911|ref|YP_003526350.1| H(+)-transporting two-sector ATPase [Nitrosococcus halophilus Nc4]
 gi|291579506|gb|ADE13963.1| H(+)-transporting two-sector ATPase [Nitrosococcus halophilus Nc4]
          Length = 593

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 25/285 (8%)

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           K  P   R+       TG R++D F PL  G +  V    G GK+ +    AR    D V
Sbjct: 195 KFRPYRQREYSVAPLITGQRILDTFFPLLKGSKAAVPGPFGAGKTIVQHQIARWSNADIV 254

Query: 191 IISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIA 242
           I    GERG E+ E ++ +        G +L +  ++VA +   P++ + A L   VT+ 
Sbjct: 255 IYVGCGERGNELVEVLDSFPQLTDPHTGRSLMERTLLVANTSNMPVVAREASLYVGVTLG 314

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EY+  +G +V+++ DS +R+A ++RE+A   G++PV  GYP  + S L    ER G  + 
Sbjct: 315 EYYRDQGYDVVIVADSTSRWAEALREVAGRLGQMPVEEGYPAYLASRLAAFYERAGRVQA 374

Query: 303 ---EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD------- 352
              + G++T + +V   G + ++P+    + I+     L++ LA+   YP V        
Sbjct: 375 LGGKVGSVTLIGAVSPPGGDFSEPVTSHTKEIVGTFWALSKELADARHYPAVSWTESFSD 434

Query: 353 --PLAS--VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             P+A+   +   DK W A+  +   ++T L    E +R + L+G
Sbjct: 435 DIPVAARWWAEHIDKRWQAERAE---AMTLLTQAEELSRIVNLVG 476


>gi|161485981|ref|NP_737923.2| F0F1 ATP synthase subunit alpha [Corynebacterium efficiens YS-314]
 gi|110832062|sp|Q8FQ22|ATPA_COREF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 546

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 162/335 (48%), Gaps = 21/335 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG-D 116
           +G    ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 63  IGVAQNLDTDSVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEKFLGRVINPLGQPIDGLG 122

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           + + + D  +E+  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 123 EIVAEEDRVLEL--QAPSVLERQPVEEPMATGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 180

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGREV---REFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G  +   R+ +E+     L+ + +V A 
Sbjct: 181 VCVDTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQ--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDAAGFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G+ITA+  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLSDDLGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           L   G  P ++   SVSR+   A +   KK+  SL
Sbjct: 359 LFNRGVRPAINVGISVSRVGGAAQTKGMKKVAGSL 393


>gi|259506260|ref|ZP_05749162.1| ATP synthase F1, alpha subunit [Corynebacterium efficiens YS-314]
 gi|23493152|dbj|BAC18123.1| H+-ATPase alpha subunit [Corynebacterium efficiens YS-314]
 gi|259166164|gb|EEW50718.1| ATP synthase F1, alpha subunit [Corynebacterium efficiens YS-314]
          Length = 557

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 162/335 (48%), Gaps = 21/335 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG-D 116
           +G    ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 74  IGVAQNLDTDSVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEKFLGRVINPLGQPIDGLG 133

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           + + + D  +E+  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 134 EIVAEEDRVLEL--QAPSVLERQPVEEPMATGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 191

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGREV---REFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G  +   R+ +E+     L+ + +V A 
Sbjct: 192 VCVDTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQ--GALEYTTIVAAP 249

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP
Sbjct: 250 ASDAAGFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 309

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G+ITA+  +    ++ +  I  +V SI DG + L   
Sbjct: 310 GDVFYLHSRLLERAAKLSDDLGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESD 369

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           L   G  P ++   SVSR+   A +   KK+  SL
Sbjct: 370 LFNRGVRPAINVGISVSRVGGAAQTKGMKKVAGSL 404


>gi|168234375|ref|ZP_02659433.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194469492|ref|ZP_03075476.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455856|gb|EDX44695.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205331676|gb|EDZ18440.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|300719164|ref|YP_003743967.1| ATP synthase, F1 complex, alpha subunit [Erwinia billingiae Eb661]
 gi|299065000|emb|CAX62120.1| ATP synthase, F1 complex, alpha subunit [Erwinia billingiae Eb661]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 146/300 (48%), Gaps = 19/300 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGAPIDGKGAIDNDGFSPIEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+ +   ++  + D   K +   +G++   +   +      N L  ++
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTI 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+++      P 
Sbjct: 223 VVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER              G  + + G++TA+  +     + +  + 
Sbjct: 283 REAFPGDVFYLHSRLLERASRVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVP 342

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E
Sbjct: 343 TNVISITDGQIFLETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 402


>gi|291510238|gb|ADE10075.1| F1 ATPase alpha [Tremella fuciformis]
          Length = 545

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 159/340 (46%), Gaps = 15/340 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G    I  GD V   G+    P      GRV++ALG PIDG   
Sbjct: 97  GMCLNLEADNVGVTIFGNDRLIKEGDTVKRTGQIVDVPVGPGLLGRVVDALGNPIDGKGP 156

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           + K +   +   K P  + R+ V +  +TG++ +D   P+  GQR  +      GKS   
Sbjct: 157 I-KAEGRTKAQLKAPGILPRRSVHEPMQTGLKSVDSLVPIGRGQRELIIGDRQTGKSAVA 215

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDES 227
             T+L+    +D  D+      +   VG++   V + ++     D +K S++V AT+ E+
Sbjct: 216 IDTILNQKKWNDGADESKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIIVAATASEA 275

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 276 APLQYLAPFSGCAMGEWFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 335

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER     K+   G++TA+  +   G + +  I  +V SI DG I L   L  +
Sbjct: 336 YLHSRLLERAAKMNKDYGAGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFK 395

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A +   K +  SL   + ++ E
Sbjct: 396 GVRPAINVGLSVSRVGSAAQTKLMKSVAGSLKLYLAQYRE 435


>gi|290995791|ref|XP_002680466.1| vacuolar ATP synthase subunit B [Naegleria gruberi]
 gi|284094087|gb|EFC47722.1| vacuolar ATP synthase subunit B [Naegleria gruberi]
          Length = 473

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 157/324 (48%), Gaps = 15/324 (4%)

Query: 53  GKNSDNLGQVIRI--NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALG 110
           G      GQV+ I  N  +V +     G +     + F     ++  S    GR+ N  G
Sbjct: 45  GNGQKRRGQVLEIVGNKAVVQVFEGTSGVDAKNTTVEFTGDVLKMPVSEDMLGRIFNGSG 104

Query: 111 KPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           KPID G   L +  L ++     P A  R   ++  +TGI  ID    +  GQ+I +F+G
Sbjct: 105 KPIDNGPPVLAEEFLDIQGQPINPFA--RLYPQEMIQTGISAIDTMCSIARGQKIPIFSG 162

Query: 170 SGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
           SG+  + + +   R        + F  ++ + +G      R F  D+  + +++   + +
Sbjct: 163 SGLPHNEIAAQICRQAGLVGKKENF-AIVFAAMGVNQETARFFKRDFEENGSMENVTLFL 221

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVAR 280
             +D+  I R + P  A+T AEY + + G +VL+IL  ++ +A ++RE++    E+P  R
Sbjct: 222 NLADDPTIERIITPRLALTTAEYLAYECGYHVLVILTDMSSYADALREVSAAREEVPGRR 281

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP  ++++L  + ER G    + G+IT +  + +  D+   PI D    I +G I ++R
Sbjct: 282 GYPGYMYTDLSTIYERAGRVVGKPGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDR 341

Query: 341 SLAEEGRYPPVDPLASVSRLADKA 364
            L     YPP++ L S+SRL   A
Sbjct: 342 QLHNRQIYPPINVLPSLSRLMKNA 365


>gi|213852796|ref|ZP_03382328.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 409

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|108796773|ref|YP_636448.1| CF1 alpha subunit of ATP synthase [Staurastrum punctulatum]
 gi|146322298|sp|Q32RS8|ATPA_STAPU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|61393541|gb|AAX45682.1| CF1 alpha subunit of ATP synthase [Staurastrum punctulatum]
          Length = 512

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 159/340 (46%), Gaps = 26/340 (7%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+  +I  S  + GRV+NALG+PID
Sbjct: 69  SDNVGAVL-----------MGDGLNIQEGSSVKATGKIAQIPVSDGYLGRVVNALGRPID 117

Query: 115 GDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           G     KGD+       I S  P  ++R+ V +  +TG+  ID   P+  GQR  +    
Sbjct: 118 G-----KGDIPASEYRLIESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDR 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             GK+ + +    +     VI   V  G++   + + +  +     +  +++V  T+D  
Sbjct: 173 QTGKTAVATDTILNQKGQNVICVYVAIGQKASSIAQVLNTFEERGAMDYTIIVAETADAP 232

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP T   IAEYF  +G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 233 ATLQYLAPYTGAAIAEYFMYRGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF 292

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER     S+  +G++TA+  V     + +  I  +V SI DG I L+  L   
Sbjct: 293 YLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNA 352

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A     K++   L   + +F E
Sbjct: 353 GIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 392


>gi|16762459|ref|NP_458076.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16767151|ref|NP_462766.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29143947|ref|NP_807289.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56415735|ref|YP_152810.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161616987|ref|YP_001590952.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167994871|ref|ZP_02575961.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168239811|ref|ZP_02664869.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168263237|ref|ZP_02685210.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464798|ref|ZP_02698690.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168823196|ref|ZP_02835196.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194442810|ref|YP_002043113.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194451394|ref|YP_002047896.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194735882|ref|YP_002116808.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250148|ref|YP_002148802.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262938|ref|ZP_03163012.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197364663|ref|YP_002144300.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198246029|ref|YP_002217813.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200387995|ref|ZP_03214607.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928828|ref|ZP_03220027.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205354550|ref|YP_002228351.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859090|ref|YP_002245741.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213427468|ref|ZP_03360218.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213609337|ref|ZP_03369163.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|238913120|ref|ZP_04656957.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289826261|ref|ZP_06545373.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|81571844|sp|Q7CPE1|ATPA_SALTY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81591816|sp|Q8XG95|ATPA_SALTI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81599723|sp|Q5PKX0|ATPA_SALPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081314|sp|A9MXA8|ATPA_SALPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739931|sp|B5EYZ8|ATPA_SALA4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739932|sp|B5FN35|ATPA_SALDC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739933|sp|B5QUS6|ATPA_SALEP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739934|sp|B5RFW1|ATPA_SALG2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739935|sp|B4TAX4|ATPA_SALHS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739936|sp|B4SYD3|ATPA_SALNS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739937|sp|B5BIN8|ATPA_SALPK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739938|sp|B4TN33|ATPA_SALSV RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|25290437|pir||AD0954 ATP synthase alpha chain [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16422441|gb|AAL22725.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|16504764|emb|CAD03128.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139583|gb|AAO71149.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129992|gb|AAV79498.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161366351|gb|ABX70119.1| hypothetical protein SPAB_04808 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401473|gb|ACF61695.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194409698|gb|ACF69917.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194711384|gb|ACF90605.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632185|gb|EDX50669.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197096140|emb|CAR61736.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213851|gb|ACH51248.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197241193|gb|EDY23813.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197287555|gb|EDY26948.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197940545|gb|ACH77878.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605093|gb|EDZ03638.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204322261|gb|EDZ07459.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205274331|emb|CAR39355.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205327332|gb|EDZ14096.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205340514|gb|EDZ27278.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205348244|gb|EDZ34875.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710893|emb|CAR35257.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261249007|emb|CBG26865.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996154|gb|ACY91039.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160399|emb|CBW19925.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914998|dbj|BAJ38972.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320088292|emb|CBY98053.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321222163|gb|EFX47236.1| ATP synthase alpha chain [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322617220|gb|EFY14125.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619092|gb|EFY15978.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625159|gb|EFY21987.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630210|gb|EFY26981.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634365|gb|EFY31099.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635249|gb|EFY31964.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642874|gb|EFY39459.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645078|gb|EFY41608.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650427|gb|EFY46839.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653619|gb|EFY49946.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661553|gb|EFY57776.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661635|gb|EFY57854.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669797|gb|EFY65939.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671990|gb|EFY68109.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674999|gb|EFY71085.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683689|gb|EFY79702.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686076|gb|EFY82061.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323132229|gb|ADX19659.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323192007|gb|EFZ77244.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200501|gb|EFZ85579.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202730|gb|EFZ87767.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208307|gb|EFZ93248.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211742|gb|EFZ96575.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218604|gb|EGA03311.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220005|gb|EGA04475.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224776|gb|EGA09041.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232516|gb|EGA16618.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235291|gb|EGA19376.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323241079|gb|EGA25116.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241372|gb|EGA25404.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248602|gb|EGA32532.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252099|gb|EGA35959.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258597|gb|EGA42260.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262371|gb|EGA45929.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268208|gb|EGA51684.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270622|gb|EGA54067.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625600|gb|EGE31945.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629685|gb|EGE36028.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|227892672|ref|ZP_04010477.1| F0F1 ATP synthase subunit alpha [Lactobacillus ultunensis DSM
           16047]
 gi|227865543|gb|EEJ72964.1| F0F1 ATP synthase subunit alpha [Lactobacillus ultunensis DSM
           16047]
          Length = 506

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 171/381 (44%), Gaps = 19/381 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           I+ +  V Y    +++   L D +  +    DN    I  NL+   V I  +G  + I  
Sbjct: 28  INEVGVVTYVGDGIARAHGLNDVLAGELLKFDNGSYGIAQNLESNDVGIIILGQFDNIRE 87

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG   + K D S  I +K P  M+RQ V+
Sbjct: 88  GDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KADKSRPIEAKAPGVMDRQSVK 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L   ++  +       I   +G++  
Sbjct: 147 QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQNVICIYVAIGQKES 206

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 207 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGRDVLI 261

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER    S+K   G++TA+  
Sbjct: 262 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPI 321

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 322 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 381

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             +L   +  + E       G
Sbjct: 382 AGTLRTDLAAYRELESFAQFG 402


>gi|114799519|ref|YP_760595.1| ATP synthase F1 subunit alpha [Hyphomonas neptunium ATCC 15444]
 gi|123128755|sp|Q0C0Z8|ATPA_HYPNA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114739693|gb|ABI77818.1| ATP synthase F1, alpha subunit [Hyphomonas neptunium ATCC 15444]
          Length = 511

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 172/376 (45%), Gaps = 20/376 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G    I  GD V        +P      GRV+NALG+PIDG   
Sbjct: 61  GMALNLEKDNVGVVIFGEDRSIKEGDTVKRTSEIVAAPVGKALLGRVVNALGEPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           L       ++  K P  + R+ V +   TGI+ ID   P+  GQR  +      GK+   
Sbjct: 121 LKDVAARSQVDVKAPGIIPRKSVHEPMMTGIKAIDGMIPVGRGQRELIIGDRQTGKTAIC 180

Query: 176 --TLLSMFARSDCF----DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVATSD 225
             T+L+    +D      DK+  +   +G++   V + ++  +  G  L  ++VV AT+ 
Sbjct: 181 IDTILNQKPTNDAAKSDKDKLFCVYVAIGQKRSTVAQVVKVLEERG-ALDYTIVVSATAS 239

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           ES  L+ +AP T  T+ E+F   G + L+I D +++ A + R+++      P    YP  
Sbjct: 240 ESAPLQYLAPFTGCTMGEWFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGD 299

Query: 286 VFSELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      + GN  +TA+  +    ++ +  I  +V SI DG I L   L 
Sbjct: 300 VFYLHSRLLERAAKLNDDNGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLF 359

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P V+   SVSR+   A +   KK+  S+   + ++   R++     +   +D   
Sbjct: 360 NSGIRPAVNVGLSVSRVGSAAQTKAMKKVAGSMKGELAQY---REMAAFAKFGSDLDAAT 416

Query: 404 DKAVHQVPIIYDFLKQ 419
            + +++   + + LKQ
Sbjct: 417 QRLLNRGARLTELLKQ 432


>gi|108796669|ref|YP_636515.1| CF1 alpha subunit of ATP synthase [Zygnema circumcarinatum]
 gi|146322299|sp|Q32RL1|ATPA_ZYGCR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|61393653|gb|AAX45795.1| CF1 alpha subunit of ATP synthase [Zygnema circumcarinatum]
          Length = 505

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+  +I  S  + GRV+NAL +PID
Sbjct: 69  SDNVGAVL-----------MGDGLTIQEGSSVKATGKIAQIPVSDGYLGRVVNALARPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK
Sbjct: 118 GKGDIASSEFRL-IESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILR 231
           + + +    +     VI   V  G++   V + +  +         +VVA +  +P  L+
Sbjct: 177 TAVATDTILNQKGQNVICVYVAIGQKASSVAQVVNTFEERGAMDYTIVVAETANAPATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   +AEYF  KG + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGAALAEYFMYKGQHTLVVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     S+  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLGSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A     K++   L   + +F E
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 392


>gi|25808399|gb|AAN74326.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 7   EEDSVGVIVFGFGNNIKEGASVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 66

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 67  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIVGDKQTGKTTVAIDAIIN 125

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 126 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 183

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + RE++      P    +P  VF    RLLER   
Sbjct: 184 AMGEYFRDHARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLERAAK 243

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 244 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 303

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 304 SRVGGAAQIKATKQVSGTLRLDLAQYRE 331


>gi|319412286|gb|ADV41823.1| ATP synthase F1 subunit alpha [Bigelowiella natans]
          Length = 532

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 24/362 (6%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
           N D  G V+ +   +V +   G   E++ GD VF       I   A   GRV++++G PI
Sbjct: 53  NGDK-GMVLNLETSVVKVVLFGPEREVTQGDYVFRTQSIVSIRTGAFLLGRVVDSVGNPI 111

Query: 114 DGDD-SLGKGDLSMEIMS-KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           DG+  S  + D S +++  K P  + RQ V +  +TGI+ ID   P+  GQR  +     
Sbjct: 112 DGEPLSFSEEDTSEQLVDIKAPGIIVRQSVFEPVQTGIKAIDAMIPIGRGQRELIIGDRQ 171

Query: 172 IGKSTLL--SMFARS-------DCFDKVIISL---VGERGREVREFIE---DYLGDN--- 213
            GK+ +   +M  +S       D  +K + S+   +G+R   V   +E   +Y  +    
Sbjct: 172 TGKTAIAVDAMINQSKTINSGPDAAEKGLFSVYVAIGQRRSTVVNIVEALKEYGAEGSLA 231

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           +  + VV ATS +S  L+ +AP T  T+ E+F   G + +   D +++ A + R+++   
Sbjct: 232 MDYTSVVAATSSDSAALQYLAPYTGCTVGEWFRDNGMHAIATYDDLSKQAVAYRQMSLLL 291

Query: 274 GELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA   +     + +  +  +V SI
Sbjct: 292 RRPPARDAFPGDVFYLHSRLLERAAKLNPDNGSGSLTAFPVIETQAGDVSAFVPTNVISI 351

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I LN  L + G  P VD   SVSR+   A +   K++  SL   + ++ E +    
Sbjct: 352 TDGQIFLNPDLFKAGIRPAVDVGISVSRVGSAAQAKGMKEVSGSLKLELAQYREAQAFEK 411

Query: 392 IG 393
            G
Sbjct: 412 FG 413


>gi|223043977|ref|ZP_03614018.1| ATP synthase F1, alpha subunit [Staphylococcus capitis SK14]
 gi|222442692|gb|EEE48796.1| ATP synthase F1, alpha subunit [Staphylococcus capitis SK14]
          Length = 503

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     +IS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---NDISEGDEVKRTGRIMEVPVGDELIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DELGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|213052668|ref|ZP_03345546.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|68171285|ref|ZP_00544686.1| ATP synthase F1, alpha subunit [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657691|ref|YP_506960.1| F0F1 ATP synthase subunit alpha [Ehrlichia chaffeensis str.
           Arkansas]
 gi|115312247|sp|Q2GHX3|ATPA_EHRCR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|67999300|gb|EAM85948.1| ATP synthase F1, alpha subunit [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599148|gb|ABD44617.1| ATP synthase F1, alpha subunit [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 509

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 165/349 (47%), Gaps = 17/349 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G V+ ++ D   +   G    +  GD     G+    P      GRV++ALG PIDG  S
Sbjct: 63  GIVLGLDCDTASVVVFGDERSVGEGDTAKCTGKLMDVPVGLELLGRVVDALGNPIDGAGS 122

Query: 119 L-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-- 175
           +  K  L +EI  K P  + RQ V +  +TGI++ID+  P+  GQR  +      GK+  
Sbjct: 123 IDSKTRLPVEI--KAPGIIARQSVTEPLQTGIKIIDMLIPIGRGQRELIIGDRKTGKTAI 180

Query: 176 ---TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDE 226
              T+++  A +D   +      I   +G++   V   ++   +   L+ ++VV A + +
Sbjct: 181 AIDTIINQKAHNDVVSEKEKVYCIYVAIGQKNSSVARIVDKLRVSGALEYTIVVAAGASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           +   + +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  V
Sbjct: 241 TVSFQYLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGP-SEKE-KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER    S+KE  G++TA+  +     + +  +  +V SI DG I L   +  
Sbjct: 301 FFLHSRLLERAAKMSDKEGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESEIFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +G  P V+   SVSR+   A +   KK+  S+   + ++ E  D    G
Sbjct: 361 KGLRPAVNVGLSVSRVGSAAQTKSVKKVAGSVKLSLAQYRELEDFAKFG 409


>gi|254167038|ref|ZP_04873891.1| ATP synthase archaeal, A subunit [Aciduliprofundum boonei T469]
 gi|197623894|gb|EDY36456.1| ATP synthase archaeal, A subunit [Aciduliprofundum boonei T469]
          Length = 582

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 21/268 (7%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RV+D F P+  G    +  G G GK+      A+    D V+    GERG E+ E +
Sbjct: 205 TGQRVLDTFFPIAKGGTAAIPGGFGTGKTVTQHQLAKWSDADIVVYVGCGERGNEMTEVL 264

Query: 207 EDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNVLLILDS 258
           ED+        G+ L    V++A +   P+  + A + T +TIAEYF   G +V L+ DS
Sbjct: 265 EDFPKLKDPRTGEPLMNRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYHVALMADS 324

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG-----PSEKEKGNITAVISV 313
            +R+A ++REI+    E+P   GYP  + S L    ER G      SEK+ G++T V +V
Sbjct: 325 TSRWAEALREISGRLEEMPGEEGYPAYLASRLAEFYERAGYVEVAGSEKKYGSVTVVGAV 384

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA-------SVSRLADKAWS 366
              G + ++P+  +   I+     L+  LA +  +P ++ L        SVS    K  +
Sbjct: 385 SPPGGDFSEPVTQNTLRIVKVFWALDAELAHKRHFPSINWLRSYSLYLNSVSSWWSKNVA 444

Query: 367 ADEKKLVSSLTHLIHRFEETRDI-RLIG 393
            D  +L      ++ R  E ++I +L+G
Sbjct: 445 KDWYELRREAMGILQREAELQEIVQLVG 472


>gi|15603357|ref|NP_246431.1| F0F1 ATP synthase subunit alpha [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|17371667|sp|Q9CKW2|ATPA_PASMU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|12721876|gb|AAK03576.1| AtpA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++R+ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGEPIDG-----KGEIENDGFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--SA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+ ++VVVA++ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERASRVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|323388533|gb|ADX60552.1| ATP synthase beta subunit [Tristiropsis acutangula]
          Length = 319

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+      G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 12  FETGIKVVDLLXXYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 71

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  +    +E P  R    LTA+T+AEYF    + +V
Sbjct: 72  GNDLYMEMKESGVINEQNLAESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 131

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 132 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 189

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 190 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 249

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 250 TAQRVKQTLQRYKELQDIIAILG 272


>gi|169303152|gb|ACA53173.1| ATP synthase alpha subunit [Aglaothamnion bipinnatum]
          Length = 404

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 8/349 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CW 101
           V  G+ +  + K    +G  + +  D V +  +G G  I  G  V   G+    P    +
Sbjct: 29  VMAGELLQFEDKEQ-TVGIALNLESDNVGVVLMGDGINILEGSSVKSTGKIAQIPVGDEF 87

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N L KPID   +    D  + I S  P  + RQ V +  +TGI  ID   P+  G
Sbjct: 88  LGRVVNPLAKPIDAKGTPAVQDTRL-IESYAPGIIGRQSVCEPLQTGITAIDSMIPIGRG 146

Query: 162 QRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+T+ L         D V + + +G++   V + +        L+ ++
Sbjct: 147 QRELIIGDRQTGKTTVALDTIINQKGQDVVCVYVAIGQKASSVAQVVSTLEEKGALEYTI 206

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +DE   L+ +AP T   +AEYF  KG   L+I D +T+ A + R+++      P 
Sbjct: 207 VVAANADEPATLQYIAPYTGAALAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPG 266

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER     K+   G++TA+  +     + +  I  +V SI DG I
Sbjct: 267 REAYPGDVFYLHSRLLERAAKLNKDLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQI 326

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L+  L   G  P ++   SVSR+   A     K++   L   + +F E
Sbjct: 327 FLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 375


>gi|166836574|gb|ABY90519.1| ATP synthase beta chain [Salvinia natans]
          Length = 372

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 27  FETGIKVVDLSAPYRRGGKIGXFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 86

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 87  GNDLYIEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 146

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 147 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 204

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   ++  
Sbjct: 205 VYVPADDLTDPAPATTFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGQEHY 263

Query: 373 --VSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 264 DTAQGVKETLQRYKELQDIIAI----PGLD 289


>gi|161505608|ref|YP_001572720.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189081313|sp|A9MJR7|ATPA_SALAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160866955|gb|ABX23578.1| hypothetical protein SARI_03784 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAYTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|25808423|gb|AAN74338.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 353

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 10  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 69

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 70  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 128

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 129 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 186

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 187 AMGEYFRDHVRHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 246

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 247 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 306

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 307 SRVGGAAQIKATKQVSGTLRLDLAQYRE 334


>gi|313899136|ref|ZP_07832661.1| ATP synthase F1, alpha subunit [Clostridium sp. HGF2]
 gi|312956076|gb|EFR37719.1| ATP synthase F1, alpha subunit [Clostridium sp. HGF2]
          Length = 506

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 9/331 (2%)

Query: 65  INLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGK 121
           +NL+  ++  V +G++  I  GD V   GR    P      GRV+NALG+ IDG + + K
Sbjct: 64  LNLEEEHVGAVLMGDDSNIREGDEVKRTGRIVEVPVGDGMLGRVVNALGQAIDGGEPI-K 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--S 179
            D    +    P  M R+ V +  +TG+++ID   P+  GQR  +      GK+ +   +
Sbjct: 123 SDKFRPVERVAPGVMTRKSVHQPIQTGLKIIDSMIPIGRGQRELIIGDRQTGKTAIAIDT 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           +  + +   K I   +G++   V + +E       ++ + +V +T+ E   L+ +AP   
Sbjct: 183 IINQKNNNVKCIYVAIGQKASTVAQIVEKLRSHGAMEYTTIVSSTASEPAPLQYIAPYAG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             I E +   GD+VL++ D +++ A + R ++      P    YP  VF    RLLER  
Sbjct: 243 CAIGEEWMENGDDVLIVYDDLSKHAVAYRTMSLLLKRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               E   G++TA+  +     + +  I  +V SI DG I L   L   G  P VD   S
Sbjct: 303 KLNDELGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNSGVRPAVDSGLS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           VSR+   A     K++  SL   + +F E +
Sbjct: 363 VSRVGSAAQIKAMKQVSGSLKLELAQFREMQ 393


>gi|6017790|gb|AAF01629.1| ATP synthase beta subunit [Glaucidium palmatum]
          Length = 491

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 150/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D   +       P  +        F+TGI+V+D+  
Sbjct: 97  GATLGRIFNVLGEPVD---NLGPIDXRTTSPXHRSAPDFIQLDTKLSIFETGIKVVDLLA 153

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+      
Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
                N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 274 AGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + L    VL R LA +G YP VDPL S S +       +E  +    +     R+
Sbjct: 332 PATTFAHLXATTVLXRGLAAKGXYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 391

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 392 KELQDIIAILG 402


>gi|114765109|ref|ZP_01444254.1| F0F1 ATP synthase subunit alpha [Pelagibaca bermudensis HTCC2601]
 gi|114542513|gb|EAU45539.1| F0F1 ATP synthase subunit alpha [Roseovarius sp. HTCC2601]
          Length = 510

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 153/320 (47%), Gaps = 7/320 (2%)

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +++GD V   G   R+   A + GR+++ LG+P+DG  +    D  + +    P  + R 
Sbjct: 84  VAVGDQVSDTGEVLRVPVGAGFLGRIVDPLGRPLDGGAAPAPEDW-LPVERPAPGIIERG 142

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGE 197
            V +  +TG+ V+D    L  GQR  +      GK+ L +         D V + + VG+
Sbjct: 143 LVSEPLETGVLVVDSLFALGRGQRELIVGDRATGKTALAVDAIIHQKHSDVVCVYVAVGQ 202

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R   +   +        +++ + VV ++  +P L+ +AP   +++AE+F  KG + L+++
Sbjct: 203 RATAIERVVAAVREHGAIERCIFVVGSASAAPGLQWIAPFAGMSMAEHFRDKGQDALIVI 262

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +T+ A + RE+A  + E P    YP  VF    RLLER      E   G++TA+    
Sbjct: 263 DDLTQHAATHRELALLTREPPGREAYPGDVFYLHARLLERAAKLSPELGGGSLTALPLAE 322

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            D  N +  I  ++ SI DG IVLN  L      P VD   SVSR+  KA +   +K+  
Sbjct: 323 TDAGNLSAYIPTNLISITDGQIVLNTHLFSTNLRPAVDVGLSVSRVGGKAQAPALRKVSG 382

Query: 375 SLTHLIHRFEETRDIRLIGG 394
            +     +F+E       GG
Sbjct: 383 RVRLDYAQFQELEMFTRFGG 402


>gi|323388527|gb|ADX60549.1| ATP synthase beta subunit [Schleichera oleosa]
          Length = 264

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 124/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 22  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 81

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 82  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 141

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 142 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 199

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 200 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 247


>gi|399078|sp|Q02848|ATPA_ANTSP RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|14177|emb|CAA44984.1| atpA [Antithamnion sp.]
          Length = 505

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 159/349 (45%), Gaps = 8/349 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CW 101
           V  G+ +  + K    +G  + +  D V +  +G G  I  G  V   G+    P    +
Sbjct: 48  VMAGELLQFEDKEQ-TVGIALNLESDNVGVVLMGDGRNILEGSSVKSTGKIAQIPVGDEF 106

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N L KPID   +    D  + I S  P  + RQ V +  +TGI  ID   P+  G
Sbjct: 107 LGRVVNPLAKPIDAKGTPSVQDTRL-IESYAPGIIGRQSVCEPLQTGITAIDSMIPIGRG 165

Query: 162 QRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSV 218
           QR  +      GK+T+ L         D V + + +G++   V + +        L+ ++
Sbjct: 166 QRELIIGDRQTGKTTVALDTIINQKGQDVVCVYVAIGQKASSVAQVVSTLEEKGALEYTI 225

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A +DE   L+ +AP T   +AEYF  KG   L+I D +T+ A + R+++      P 
Sbjct: 226 VVAANADEPATLQYIAPYTGAALAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPG 285

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER     ++   G++TA+  +     + +  I  +V SI DG I
Sbjct: 286 REAYPGDVFYLHSRLLERAAKLNQDLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQI 345

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L+  L   G  P ++   SVSR+   A     K++   L   + +F E
Sbjct: 346 FLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 394


>gi|325677964|ref|ZP_08157606.1| ATP synthase F1, alpha subunit [Ruminococcus albus 8]
 gi|324110518|gb|EGC04692.1| ATP synthase F1, alpha subunit [Ruminococcus albus 8]
          Length = 504

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G  E I  G  V   GR    P      GRV+NALG PIDG  +
Sbjct: 61  GMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGDAMLGRVVNALGAPIDGKGA 120

Query: 119 LGKGDLSMEIMSKVPPA---MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           +    L+ E      PA   + R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 121 I----LTNETRPVESPAFGIITRKSVSRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKT 176

Query: 176 TL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRK 232
           T+ L         + + I + +G++   V   ++     D +  S+VV AT+ E   L+ 
Sbjct: 177 TIALDTIINQKGKNVICIYVAIGQKISTVANIVDTLTKNDAMDYSIVVSATASEMAPLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V +AEYF  +G +VL + D +++ A + R ++           YP  VF    R
Sbjct: 237 IAPYAGVAMAEYFMLQGKDVLCVYDDLSKHAVAYRTMSLLLKRPTGREAYPGDVFYLHSR 296

Query: 293 LLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 297 LLERACCLNEENGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETELFFSGVRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+P  SVSR+   A     KK+   L  L  ++ E +     G     +D      + Q 
Sbjct: 357 VNPGISVSRVGGSAQIKAMKKVSGPLKLLYSQYRELQSFSQFGS---DLDQDTKDRLAQG 413

Query: 411 PIIYDFLKQ---SPSDLSSEDVF 430
             I + LKQ   SP D+  + V 
Sbjct: 414 ERIVEVLKQSKNSPVDVEKQVVI 436


>gi|290511664|ref|ZP_06551032.1| ATP synthase F1, alpha subunit [Klebsiella sp. 1_1_55]
 gi|289775454|gb|EFD83454.1| ATP synthase F1, alpha subunit [Klebsiella sp. 1_1_55]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLENDGFSA-VEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|269115087|ref|YP_003302850.1| ATP synthase subunit beta [Mycoplasma hominis]
 gi|268322712|emb|CAX37447.1| ATP synthase beta chain [Mycoplasma hominis ATCC 23114]
          Length = 452

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 10/218 (4%)

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGR 200
           +TGI+ ID F P+  G +IG+F G+G+GK+ L+     ++  + +    + I   GER R
Sbjct: 122 ETGIKAIDFFMPIVKGAKIGLFGGAGVGKTVLMKEIIFNLNKQHEANSNIFIG-SGERSR 180

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
           E  E   +    NL K S++ ++  +E+P  R       +T AEY      +NVLL +D+
Sbjct: 181 EGIELYNELSSSNLMKDSIMFISKMNEAPGARTSIVPIGITAAEYLRDTCNENVLLFIDN 240

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E+++  G+ P   GY +++ S++  +  R+     +KG+IT+  ++ +  D
Sbjct: 241 IYRFIQAENEVSSALGKKPSIGGYQSTLESDVTEVESRL--FRNKKGSITSFQTIFLPMD 298

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           + +DP A +V + LDG++VL+RS A +  +P  DPLAS
Sbjct: 299 DLSDPSAVAVFNHLDGNLVLSRSQAAKNIFPAFDPLAS 336


>gi|289805453|ref|ZP_06536082.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 463

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|77918555|ref|YP_356370.1| F0F1 ATP synthase subunit alpha [Pelobacter carbinolicus DSM 2380]
 gi|77920723|ref|YP_358538.1| F0F1 ATP synthase subunit alpha [Pelobacter carbinolicus DSM 2380]
 gi|115312225|sp|Q39ZT9|ATPA1_PELCD RecName: Full=ATP synthase subunit alpha 1/3; AltName: Full=ATP
           synthase F1 sector subunit alpha 1/3; AltName:
           Full=F-ATPase subunit alpha 1/3
 gi|77544638|gb|ABA88200.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter carbinolicus
           DSM 2380]
 gi|77546806|gb|ABA90368.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter carbinolicus
           DSM 2380]
          Length = 502

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 17/340 (5%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
           D +G V+ +  D V    +G    I  GD V   GR    P      GRV+N +G+PIDG
Sbjct: 58  DVIGMVLNLEEDNVGAAILGDTHHIKEGDSVRRTGRIVEVPVGEALIGRVVNGIGQPIDG 117

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L +G  + ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+
Sbjct: 118 GGAL-EGAEARQVEIKAPGIVTRKSVHQPVQTGLKAIDALVPIGRGQRELIIGDRQTGKT 176

Query: 176 TL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDES 227
            L +         D V I + +G++   V + +     D LK+      ++VV A + E 
Sbjct: 177 ALAIDAIINQKGQDMVCIYVAIGQKQSTVAQVV-----DKLKQHGAMDYTIVVSAGASEP 231

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP   VT+ EYF   G + L++ D +++ A + R+++      P    +P  VF
Sbjct: 232 APLQFIAPYAGVTMGEYFRDNGRHALIVYDDLSKHAVAYRQLSLLLRRPPGREAFPGDVF 291

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 292 YLHSRLLERAAKLNDELGGGSLTALPIIETQAGDLSSYIPTNVISITDGQIFLEADLFYS 351

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A     K++  +L   + ++ E
Sbjct: 352 GVRPAINVGLSVSRVGGSAQVKAMKQVAGTLRLSLAQYRE 391


>gi|329121455|ref|ZP_08250079.1| ATP synthase F1 sector alpha subunit [Dialister micraerophilus DSM
           19965]
 gi|327469370|gb|EGF14840.1| ATP synthase F1 sector alpha subunit [Dialister micraerophilus DSM
           19965]
          Length = 514

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 150/319 (47%), Gaps = 11/319 (3%)

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I  GD V   GR    P      GRV+N+LG+PIDG   + K D   +I  K P
Sbjct: 76  LGKHETIKEGDTVKRTGRLMQVPVGNAVIGRVVNSLGQPIDGKGDI-KTDAYRDIEIKAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFD 188
               RQ V    +TG++ ID   P+  GQR  +    G GK+     T+L+   ++    
Sbjct: 135 GIAERQPVNVPLQTGLKCIDSMVPIGRGQRELIIGDRGTGKTAIAIDTILNQKGQNVIC- 193

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            V +S+  +    VR +        +  SV+V A + E   ++ +AP + V+IAE+F  +
Sbjct: 194 -VYVSIGQKNSNVVRVYERLKEAGAMDYSVIVHAGAAEGSPMQYLAPYSGVSIAEHFMHQ 252

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G +VL+I D +++ A + R ++      P    YP  VF    RLLER     +E   G+
Sbjct: 253 GKDVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAARLSEELGGGS 312

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+  +     +    I  +V SI DG I L   L   G  P ++   SVSR+   A  
Sbjct: 313 ITALPIIETLAGDVGAYIPTNVISITDGQIFLETGLFYSGVRPAINVGLSVSRVGGSAQI 372

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KK+  +L   + +F E
Sbjct: 373 KAMKKVAGTLRLDLAQFRE 391


>gi|313891438|ref|ZP_07825054.1| ATP synthase F1, alpha subunit [Dialister microaerophilus UPII
           345-E]
 gi|313120213|gb|EFR43389.1| ATP synthase F1, alpha subunit [Dialister microaerophilus UPII
           345-E]
          Length = 514

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 150/319 (47%), Gaps = 11/319 (3%)

Query: 75  VGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I  GD V   GR    P      GRV+N+LG+PIDG   + K D   +I  K P
Sbjct: 76  LGKHETIKEGDTVKRTGRLMQVPVGNAVIGRVVNSLGQPIDGKGDI-KTDAYRDIEIKAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFD 188
               RQ V    +TG++ ID   P+  GQR  +    G GK+     T+L+   ++    
Sbjct: 135 GIAERQPVNVPLQTGLKCIDSMVPIGRGQRELIIGDRGTGKTAIAIDTILNQKGQNVIC- 193

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            V +S+  +    VR +        +  SV+V A + E   ++ +AP + V+IAE+F  +
Sbjct: 194 -VYVSIGQKNSNVVRVYERLKEAGAMDYSVIVHAGAAEGSPMQYLAPYSGVSIAEHFMHQ 252

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G +VL+I D +++ A + R ++      P    YP  VF    RLLER     +E   G+
Sbjct: 253 GKDVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAARLSEELGGGS 312

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+  +     +    I  +V SI DG I L   L   G  P ++   SVSR+   A  
Sbjct: 313 ITALPIIETLAGDVGAYIPTNVISITDGQIFLETGLFYSGVRPAINVGLSVSRVGGSAQI 372

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              KK+  +L   + +F E
Sbjct: 373 KAMKKVAGTLRLDLAQFRE 391


>gi|323388499|gb|ADX60535.1| ATP synthase beta subunit [Alectryon connatus]
          Length = 263

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 124/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 21  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 80

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 81  GNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 140

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 141 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 198

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 199 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 246


>gi|240145790|ref|ZP_04744391.1| ATP synthase F1, alpha subunit [Roseburia intestinalis L1-82]
 gi|257202123|gb|EEV00408.1| ATP synthase F1, alpha subunit [Roseburia intestinalis L1-82]
          Length = 500

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 141/291 (48%), Gaps = 6/291 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            + GR+INALG PIDG   + K D    I  + P  ++RQ V++  +TGI  ID   P+ 
Sbjct: 103 AYLGRIINALGAPIDGKGEI-KADDYRAIEQEAPGIVDRQSVKQPMETGILAIDSMFPIG 161

Query: 160 HGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKK 216
            GQR  +      GK+++ +         D V I + +G++   V + +     +  +  
Sbjct: 162 RGQRELIIGDRQTGKTSIAVDTILNQKGKDVVCIYVAIGQKASTVAKLVNTLTKNGAMDY 221

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           S+V+ +T+ ES  L+ +AP     +AEYF  KG +VL++ D +++ A + R ++      
Sbjct: 222 SIVLSSTASESASLQYIAPYAGTALAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLERS 281

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER      E   G+ITA+  +     + +  I  +V SI DG
Sbjct: 282 PGREAYPGDVFYLHSRLLERSSKLNDELGGGSITALPIIETQAGDVSAYIPTNVISITDG 341

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            I L   L   G  P V+   SVSR+   A +   KK   ++   + ++ E
Sbjct: 342 QIFLESDLFNSGMRPAVNVGLSVSRVGGAAQTKAMKKASGTIRIDLAQYRE 392


>gi|206580919|ref|YP_002241285.1| ATP synthase F1, alpha subunit [Klebsiella pneumoniae 342]
 gi|288937924|ref|YP_003441983.1| ATP synthase F1 subunit alpha [Klebsiella variicola At-22]
 gi|226739898|sp|B5XZM2|ATPA_KLEP3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|206569977|gb|ACI11753.1| ATP synthase F1, alpha subunit [Klebsiella pneumoniae 342]
 gi|288892633|gb|ADC60951.1| ATP synthase F1, alpha subunit [Klebsiella variicola At-22]
          Length = 513

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLENDGFSA-VEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|290490196|gb|ADD31505.1| ATP synthase CF1 alpha subunit protein [Euonymus americanus]
          Length = 507

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 173/378 (45%), Gaps = 11/378 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGGGLMIEEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISASE-SRLIESPAPGIISRRSVYESLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +   + VI   V  G++   V + +         +  +VVA   +SP  L+ +
Sbjct: 179 VATDTILNQQGENVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAEMADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++   L   + +F E   +     +   +D +    + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE---LEAFAQFASDLDKVTQNQLARGQ 415

Query: 412 IIYDFLKQSPSD-LSSED 428
            + + LKQS S  L+ ED
Sbjct: 416 RLRELLKQSQSAPLAVED 433


>gi|2447013|dbj|BAA22509.1| defective F1F0-ATPase alpha subunit precursor [Saccharomyces
           cerevisiae]
          Length = 545

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 21/319 (6%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQ 139
           G+LV   G     P      GRV++ALG PIDG    D+ G+    +    K P  + R+
Sbjct: 122 GELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRR 177

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK----- 189
            V +  +TG++ +D   P+  GQR  +      GK+     T+L+    ++  D+     
Sbjct: 178 SVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLY 237

Query: 190 VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP TA +I E+F   
Sbjct: 238 CVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIDEWFRDN 297

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGN 306
           G + L++ D +++ A + R+++      P    YP  VF    RLLER    SEKE  G+
Sbjct: 298 GKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGS 357

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 358 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 417

Query: 367 ADEKKLVSSLTHLIHRFEE 385
              K++  SL   + ++ E
Sbjct: 418 KALKQVAGSLKLFLAQYRE 436


>gi|212640522|ref|YP_002317042.1| F0F1 ATP synthase subunit alpha [Anoxybacillus flavithermus WK1]
 gi|226739843|sp|B7GMF5|ATPA_ANOFW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|212562002|gb|ACJ35057.1| F0F1-type ATP synthase, alpha subunit [Anoxybacillus flavithermus
           WK1]
          Length = 507

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ IV + P  GI E    GD V   GR    P      GRV+N LG+P+DG   +   +
Sbjct: 73  NVGIVILGPYTGIKE----GDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPIETTE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++ 
Sbjct: 129 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAVDTII 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       L  ++VV A++ +   L  +AP   VT
Sbjct: 188 NQKGKNMICIYVAIGQKESTVRNVVETLRKYGALDYTIVVTASASQPAPLLFLAPYAGVT 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           + EYF  KG +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 SDAKGAGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 367

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 368 RVGGAAQIKAMKKVSGTL 385


>gi|183597135|ref|ZP_02958628.1| hypothetical protein PROSTU_00374 [Providencia stuartii ATCC 25827]
 gi|188023445|gb|EDU61485.1| hypothetical protein PROSTU_00374 [Providencia stuartii ATCC 25827]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 26/336 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGPVEHDGFSPVEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERAARVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +   +D    K ++    + + LKQ
Sbjct: 401 ---RELAAFSQFASDLDDATRKQLNHGQKVTELLKQ 433


>gi|163869187|ref|YP_001610439.1| F0F1 ATP synthase subunit alpha [Bartonella tribocorum CIP 105476]
 gi|189081288|sp|A9IYX0|ATPA_BART1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161018886|emb|CAK02444.1| ATP synthase alpha chain [Bartonella tribocorum CIP 105476]
          Length = 511

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 19/343 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + + +D V +   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMALNLEVDNVGVVIFGSDRDIREGDCVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-L 177
           L + +    +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK+  L
Sbjct: 121 LKETE-RRRVDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGKTAIL 179

Query: 178 LSMFARSDCF---------DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVATS 224
           L  F     F         DKV  I   +G++   V +F++  +  G  L+ S++V AT+
Sbjct: 180 LDTFLNQKPFHEKGAGREQDKVYCIYVAIGQKRSTVAQFVKVLEERG-ALEYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +APL    + EYF   G + L+  D +++ A + R+++      P    YP 
Sbjct: 239 SDPAPLQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L  +L
Sbjct: 299 DVFYLHSRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 359 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 401


>gi|62182349|ref|YP_218766.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224585662|ref|YP_002639461.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|75505461|sp|Q57HX7|ATPA_SALCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808112|sp|C0Q2N4|ATPA_SALPC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|62129982|gb|AAX67685.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|224470190|gb|ACN48020.1| ATP synthase subunit A [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322716842|gb|EFZ08413.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  +   G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGRTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|152978012|ref|YP_001343641.1| F0F1 ATP synthase subunit alpha [Actinobacillus succinogenes 130Z]
 gi|171472938|sp|A6VL59|ATPA_ACTSZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|150839735|gb|ABR73706.1| ATP synthase F1, alpha subunit [Actinobacillus succinogenes 130Z]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 147/304 (48%), Gaps = 27/304 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  + R+ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIKNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--L 214
             GQR  +      GK+ L   ++  + D   K I   +G++   +   +   L +N  L
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDTIINQKDSGIKCIYVAIGQKASTIANVVRK-LEENGAL 218

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
             +++VVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+    
Sbjct: 219 ANTIIVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLR 278

Query: 275 ELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHN 321
             P    +P  VF    RLLER              G  + + G++TA+  +     + +
Sbjct: 279 RPPGREAFPGDVFYLHSRLLERAARVNEEYVENFTKGEVKGKTGSLTALPIIETQAGDVS 338

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + 
Sbjct: 339 AFVPTNVISITDGQIFLESNLFNAGVRPAVNPGISVSRVGGAAQTKVVKKLAGGIRTALA 398

Query: 382 RFEE 385
           ++ E
Sbjct: 399 QYRE 402


>gi|254167579|ref|ZP_04874430.1| ATP synthase archaeal, A subunit [Aciduliprofundum boonei T469]
 gi|289596936|ref|YP_003483632.1| ATP synthase, A subunit [Aciduliprofundum boonei T469]
 gi|197623388|gb|EDY35952.1| ATP synthase archaeal, A subunit [Aciduliprofundum boonei T469]
 gi|289534723|gb|ADD09070.1| ATP synthase, A subunit [Aciduliprofundum boonei T469]
          Length = 582

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 21/268 (7%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RV+D F P+  G    +  G G GK+      A+    D V+    GERG E+ E +
Sbjct: 205 TGQRVLDTFFPIAKGGTAAIPGGFGTGKTVTQHQLAKWSDADIVVYVGCGERGNEMTEVL 264

Query: 207 EDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNVLLILDS 258
           ED+        G+ L    V++A +   P+  + A + T +TIAEYF   G +V L+ DS
Sbjct: 265 EDFPKLKDPRTGEPLMNRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYHVALMADS 324

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG-----PSEKEKGNITAVISV 313
            +R+A ++REI+    E+P   GYP  + S L    ER G      SEK+ G++T V +V
Sbjct: 325 TSRWAEALREISGRLEEMPGEEGYPAYLASRLAEFYERAGYVEVAGSEKKYGSVTVVGAV 384

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA-------SVSRLADKAWS 366
              G + ++P+  +   I+     L+  LA +  +P ++ L        SVS    K  +
Sbjct: 385 SPPGGDFSEPVTQNTLRIVKVFWALDAELAHKRHFPSINWLRSYSLYLNSVSSWWSKNVA 444

Query: 367 ADEKKLVSSLTHLIHRFEETRDI-RLIG 393
            D  +L      ++ R  E ++I +L+G
Sbjct: 445 KDWYELRREAMGILQREAELQEIVQLVG 472


>gi|308808418|ref|XP_003081519.1| putative vacuolar ATPase B subunit [Oryza sativa (ISS)
           [Ostreococcus tauri]
 gi|116059982|emb|CAL56041.1| putative vacuolar ATPase B subunit [Oryza sativa (ISS)
           [Ostreococcus tauri]
          Length = 662

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 154/334 (46%), Gaps = 34/334 (10%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ ++ D  +V I     G +     L F     +   S    GR+ N  G+PIDG  
Sbjct: 232 GQVLEVDGDRAVVQIFEGTSGIDGKRTKLEFTGEVLKTPVSEDMLGRIFNGSGRPIDGGP 291

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  ++I         R   E+  +TGI  ID+   +  GQ+I +F+ +G+  + +
Sbjct: 292 KV-TAEKYLDIQGASINPNERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEI 350

Query: 178 LSMFARSDCFDKVIISLVGERGREVRE-------------------------FIEDY-LG 211
            +      C    ++   GE GREV                           F  D+   
Sbjct: 351 AAQI----CRQADLVRRRGEDGREVESTGTSGDDDFCIVFAAMGVNLETANFFRRDFERT 406

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270
             L+K  + +  +++  I R + P  A+T AEY +  KG +VL+IL  ++ +A ++RE++
Sbjct: 407 GALEKVCLFLNLANDPTIERIITPRIALTTAEYLAYEKGKHVLVILTDMSSYADALREVS 466

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  ++++L  + ER G  +  KG+IT +  + +  D+   PI D    
Sbjct: 467 AAREEVPGRRGYPGYMYTDLATIYERAGRIKGRKGSITQLPILTMPNDDITHPIPDLTGY 526

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 527 ITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 560


>gi|49476189|ref|YP_034230.1| F0F1 ATP synthase subunit alpha [Bartonella henselae str.
           Houston-1]
 gi|81696108|sp|Q6G1W7|ATPA_BARHE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49238997|emb|CAF28297.1| ATP synthase alpha chain [Bartonella henselae str. Houston-1]
          Length = 511

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 19/343 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + + +D V +   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMALNLEIDNVGVVIFGSDRDIREGDCVKRLGAIVEVPVGPALLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-L 177
           L K      +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK+  L
Sbjct: 121 L-KATEYRRVDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGKTAIL 179

Query: 178 LSMFARSDCF---------DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVATS 224
           L  F     F         DKV  I   +G++   V +F++  +  G  L+ S++V AT+
Sbjct: 180 LDAFLNQKPFHEKDAGNEKDKVYCIYVAIGQKRSTVAQFVKVLEERG-ALEYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP 
Sbjct: 239 SDPAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L  +L
Sbjct: 299 DVFYLHSRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 359 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 401


>gi|330718990|ref|ZP_08313590.1| F0F1 ATP synthase subunit alpha [Leuconostoc fallax KCTC 3537]
          Length = 507

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 9/323 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+NALG+PIDG   + K D +  +
Sbjct: 71  VGIIILGKYDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGLGEI-KTDKTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDC 186
             K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK++L   ++  + D 
Sbjct: 130 EVKAPGVMQRKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKDQ 189

Query: 187 FDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              VI   +G++   VR  +E    +G  L  ++VV A   E   +  +AP     + E 
Sbjct: 190 NMIVIYVAIGQKDSTVRTQVETLRQMG-ALDYTIVVNAGPSEPAPMLYLAPYVGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 249 FMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDEL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+  
Sbjct: 309 GGGSMTALPFIETQAGDVSAYIPTNVISITDGQIFLDADQFYAGVRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEE 385
            A     KK+  +L   +  + E
Sbjct: 369 DAQIKAMKKVAGTLRLDLASYRE 391


>gi|312183583|gb|ADQ42361.1| V-type ATP synthase subunit B [Methanosaeta harundinacea]
          Length = 460

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 163/324 (50%), Gaps = 24/324 (7%)

Query: 60  GQVIRINLDIVYICPV----GIGEEISL---GDLVFHWGRFRISPSACWCGRVINALGKP 112
           GQV+  + ++V +       G+G+E ++   GD++    +  +SP     GRV++  G+P
Sbjct: 42  GQVLDTSNEVVVVQVFEGTGGLGKESTVKFTGDVI----KMPLSPD--IIGRVLSGSGQP 95

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
            DG   +   ++  EI         R++     +TGI  ID    L  GQ++ +F+G+G+
Sbjct: 96  RDGGPPIVP-EVEREIAGAAINPAAREKPRAFIQTGISTIDGTNTLVRGQKLPIFSGAGL 154

Query: 173 GKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
             + +    AR       ++ F  V+   +G    E + F+ D+     L+++VV +  +
Sbjct: 155 PHNDVALQIARQAKALGEAESF-AVVFCAMGITNEEAQHFMADFERTGALERAVVFLNLA 213

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           D+  + R + P   +T AEY +   D +VL+I   +T +  ++R++     E+P  RGYP
Sbjct: 214 DDPAVERLLTPRLGLTTAEYLAFDLDMHVLVIYTDMTNYCEAMRQMGAAREEVPGRRGYP 273

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
             ++++L    ER G    +KG+IT    + + GD+   PI D    I +G ++++R L 
Sbjct: 274 GYMYTDLAIQYERAGIITGKKGSITQFPILTMPGDDITHPIPDLSGYITEGQLIVSRELH 333

Query: 344 EEGRYPPVDPLASVSRLADKAWSA 367
            +G YPP+D   S+SRL +    A
Sbjct: 334 RKGIYPPIDIRPSLSRLMNSGIGA 357


>gi|169303184|gb|ACA53189.1| ATP synthase alpha subunit [Centroceras clavulatum]
          Length = 404

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 161/353 (45%), Gaps = 16/353 (4%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CW 101
           V  G+ +  + K    +G  + +  D V +  +G G  I  G  V   G+    P    +
Sbjct: 29  VMAGELLQFEDKEQ-TVGIALNLESDNVGVVLMGDGRSILEGSSVKSTGKIAQIPVGDNF 87

Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
            GRV+N L KPID      KG  S+E    I S  P  + RQ V +  +TGI  ID   P
Sbjct: 88  LGRVVNPLAKPIDA-----KGIPSIEDTRLIESYAPGIIGRQSVCEPLQTGITAIDSMIP 142

Query: 158 LCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-L 214
           +  GQR  +      GK+T+ L         D V + + +G++   V + +        L
Sbjct: 143 IGRGQRELIIGDRQTGKTTVALDTIINQKGQDVVCVYVAIGQKASSVAQVVSTLEEKGAL 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + ++VV A +DE   L+ +AP T   +AEYF  KG   L+I D +T+ A + R+++    
Sbjct: 203 EYTIVVAANADEPATLQYIAPYTGAALAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLR 262

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    YP  VF    RLLER     ++   G++TA+  +     + +  I  +V SI 
Sbjct: 263 RPPGREAYPGDVFYLHSRLLERAAKLNQDLGGGSMTALPIIETQAGDVSAYIPTNVISIT 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           DG I L+  L   G  P ++   SVSR+   A     K++   L   + +F E
Sbjct: 323 DGQIFLSGDLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 375


>gi|310947796|gb|ADP50717.1| ATP synthase beta chain [Cheilanthes distans]
          Length = 370

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 28/309 (9%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVRNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +        
Sbjct: 59  FGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNISE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S +  + W   E+  +    +     R++E +DI  
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQRYKELQDIIA 294

Query: 392 IGGYRPGVD 400
           I    PG+D
Sbjct: 295 I----PGLD 299


>gi|299830366|ref|YP_003734581.1| ATP synthase CF1 alpha subunit [Kryptoperidinium foliaceum]
 gi|297385068|gb|ADI40366.1| ATP synthase CF1 alpha subunit [Kryptoperidinium foliaceum]
          Length = 503

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 155/334 (46%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G +I  G  V   GR    P    + GRV++ALG PIDG 
Sbjct: 60  TIGIALNLENDNVGVVLMGTGRQILEGSTVKATGRIAQVPVGEAFLGRVVSALGAPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + + +  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEIASSETQL-LEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLVG--ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           +      +   + VI   VG  ++   V + +     +N +  ++VV A++++   L+ +
Sbjct: 179 IAIDTIINQKTENVICVYVGVGQKASTVAQVVNVLEENNAMAYTIVVSASANDPATLQYI 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP      AEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RL
Sbjct: 239 APYAGAAFAEYFMYKGKATLVIYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER          G++TA+  +     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSDALGGGSMTALPIIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A +   KK+   L   + +F+E
Sbjct: 359 NVGISVSRVGSAAQTKAMKKVAGKLKLELAQFDE 392


>gi|167395204|ref|XP_001741270.1| vacuolar ATP synthase subunit B [Entamoeba dispar SAW760]
 gi|165894165|gb|EDR22227.1| vacuolar ATP synthase subunit B, putative [Entamoeba dispar SAW760]
          Length = 496

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 142/287 (49%), Gaps = 18/287 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I  S    GRV N  GKP+D   ++   D  ++I  +     NR   E+  +TGI  ID+
Sbjct: 97  IPVSEDMLGRVFNGSGKPVDKGPNVIAEDY-LDINGQPINPANRVYPEEMIQTGISAIDV 155

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VIISLVGERG 199
              +  GQ+I +F+ +G+  + + +   R     K               ++ + +G   
Sbjct: 156 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKHKGLGVVDNHEDNFAIVFAAMGVNM 215

Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILD 257
              R F +D+  + ++++  + +  ++   I R + P  A+T AEYF+   D +VL+IL 
Sbjct: 216 ETARFFRQDFEENGSMERVTLFLNLANHPTIERIVTPRLALTTAEYFAYTCDMHVLVILT 275

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
            ++ +A ++RE++    E+P  RGYP  ++++L  + ER G      G+IT +  + +  
Sbjct: 276 DMSSYADALREVSAAREEVPGRRGYPGYMYTDLASIYERAGRVNGRVGSITQIPILTMPN 335

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           D+   PI D    I +G I ++R++     YPP++ L S+SRL   A
Sbjct: 336 DDITHPIPDLTGYITEGQIYVDRNMHNRQIYPPINVLPSLSRLMKSA 382


>gi|156598245|gb|ABU85386.1| ATP synthase CF1 alpha subunit [Elaeis oleifera]
          Length = 507

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 169/372 (45%), Gaps = 10/372 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISASE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAQTADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRKKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSNSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++       + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LEAFAQFASDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPSD 423
            + + LKQS SD
Sbjct: 416 RLRELLKQSQSD 427


>gi|116333890|ref|YP_795417.1| F0F1-type ATP synthase, alpha subunit [Lactobacillus brevis ATCC
           367]
 gi|122269423|sp|Q03QY6|ATPA_LACBA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116099237|gb|ABJ64386.1| F0F1-type ATP synthase, alpha subunit [Lactobacillus brevis ATCC
           367]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 154/345 (44%), Gaps = 17/345 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +    V I  +G    I+ GD V   GR    P      GRV+N LG+ IDG   
Sbjct: 61  GMVQNLEASDVGIVILGDFTGITEGDTVKRTGRIMEVPVGDQLIGRVVNPLGQAIDG--- 117

Query: 119 LGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KGD+S +    I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 --KGDISTDKTRPIEHKAPGVMDRQGVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPIL 230
           S++   ++  + D     I   +G++   VR  +   +  G  +  ++VV A+  E   +
Sbjct: 176 SSIAIDTIINQKDQDMICIYVAIGQKASTVRAQVSTLEKFG-AMDYTIVVTASPSEPAPM 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + E F   G +VL++ D +T+ A + RE++      P    YP  +F   
Sbjct: 235 LYIAPYAGAAMGEEFMHNGKHVLIVYDDLTKQADAYRELSLILRRAPGREAYPGDIFYTH 294

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +     + +  I  +V SI DG I LN      G  
Sbjct: 295 SRLLERAAKLNDELGGGSMTALPVIETKAGDVSAYIPTNVISITDGQIFLNSDSFYSGVR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           P +D   SVSR+   A     KK+  +L   +  ++E       G
Sbjct: 355 PAMDAGTSVSRVGGDAQIKAMKKVAGTLRLDLSAYKELESFAQFG 399


>gi|156739724|gb|ABU93515.1| ATP synthase beta subunit [Arachniodes amoena]
          Length = 394

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 149/309 (48%), Gaps = 24/309 (7%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V D+  P   
Sbjct: 37  GRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVADLLAPYRR 93

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +  
Sbjct: 94  GGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 152

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP   +
Sbjct: 213 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 271 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|121605228|ref|YP_982557.1| F0F1 ATP synthase subunit alpha [Polaromonas naphthalenivorans CJ2]
 gi|190358157|sp|A1VPQ8|ATPA2_POLNA RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|120594197|gb|ABM37636.1| ATP synthase F1, alpha subunit [Polaromonas naphthalenivorans CJ2]
          Length = 520

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 13/333 (3%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           I  N+D   I  V +G+   +  GD V   GR   ++      GRVI+ LG+P+D   SL
Sbjct: 69  IAFNVDETEIGVVLLGDYGHLHAGDPVRRTGRVMDVAVGEGLLGRVIDPLGRPLD---SL 125

Query: 120 GKGDLSMEIMSKVP--PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           G    S  +  + P  P M+R  V    +TG++V+D   P+  GQR  +      GK+ +
Sbjct: 126 GPVVSSARLALERPAAPIMDRAPVTVPLQTGLKVVDALIPIGRGQRELILGDRQTGKTAI 185

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
              ++  +       +   +G+R   V   I        ++ +VVVV   ++ P L  +A
Sbjct: 186 AVDTILNQRGQDVLCVYCAIGQRAAAVARTIAVLREKGAMEYTVVVVTEGNDPPGLAYIA 245

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P  A +IAE+F   G +VL++ D +T+ A + RE++      P    +P  +F    RLL
Sbjct: 246 PYAATSIAEHFMEMGRDVLVVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLL 305

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E+  G++TA+  +  +  N +  I  ++ SI DG I L+ SL E G  P VD
Sbjct: 306 ERATHLRPERGGGSLTALPIIETEAQNMSAYIPTNLISITDGQIYLSPSLFELGVLPAVD 365

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+  KA  A  + +   L     +FEE
Sbjct: 366 VSKSVSRVGGKAQRAAYRAVTGDLKLAYAQFEE 398


>gi|270264092|ref|ZP_06192359.1| ATP synthase subunit alpha [Serratia odorifera 4Rx13]
 gi|270041741|gb|EFA14838.1| ATP synthase subunit alpha [Serratia odorifera 4Rx13]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFS-PVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  V      GK+ L   ++  + D   K +   +G++   +   +   E++    L  +
Sbjct: 164 RELVIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               YP  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|156739794|gb|ABU93550.1| ATP synthase beta subunit [Dryopsis heterolaena]
          Length = 389

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 29  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 86  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 145

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 146 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 206 GSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD      R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 264 ATTSAHLDATTAPPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 322

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 323 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 357


>gi|156739754|gb|ABU93530.1| ATP synthase beta subunit [Dryopteris sacrosancta]
          Length = 394

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSM----FARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+  G+G+GK+ L++      A++     V   +  ER RE      E  E  
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 149

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  
Sbjct: 150 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQ 209

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++     +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 210 AGSEVSALLVRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 267

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R
Sbjct: 268 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQR 326

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 327 YKELQDIIAILG 338


>gi|257462634|ref|ZP_05627044.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D12]
 gi|317060281|ref|ZP_07924766.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D12]
 gi|313685957|gb|EFS22792.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D12]
          Length = 501

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 7/311 (2%)

Query: 81  ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GD V   GR  + PS     GRV+NALG+ IDG   + +    M +  K    ++RQ
Sbjct: 82  IKEGDEVKATGRVVLVPSGEGMLGRVVNALGEAIDGKGEI-RPSKYMPVERKASGIISRQ 140

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGE 197
            V +  +TG++ ID   P+  GQR  +      GK+ +   ++  +     K I   +G+
Sbjct: 141 PVVEPLQTGLKSIDGMVPIGRGQRELIIGDRQTGKTAIALDAIINQKGNGVKCIYVAIGQ 200

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V +  +       ++ +++V AT+ E+  L+ +AP + V + EYF  KG++VL+I 
Sbjct: 201 KRSTVAQIFQKLENAGAMEYTIIVAATASEAAPLQYLAPYSGVAMGEYFMDKGEHVLIIY 260

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + RE++      P    YP  VF    RLLER      E   G+ITA+  + 
Sbjct: 261 DDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSPELGGGSITALPIIE 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ S
Sbjct: 321 TQAGDVSAYIPTNVISITDGQIFLETQLFNSGFRPAINAGISVSRVGGAAQIKAMKQVAS 380

Query: 375 SLTHLIHRFEE 385
            +   + ++ E
Sbjct: 381 KVKLELAQYNE 391


>gi|289450330|ref|YP_003475406.1| ATP synthase F1 subunit alpha [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184877|gb|ADC91302.1| ATP synthase F1, alpha subunit [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 629

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 9/338 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           NS   G ++ +  + +     G   EI+ G +V   G+    P    + GRV+NALG+P+
Sbjct: 160 NSGIKGMILDLRENQIGCVIFGDESEITEGSIVKRTGKTAGIPVGEGFLGRVVNALGEPV 219

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    +   D    I +  P  + RQ V +  +TG+  ID   P+  GQR  +      G
Sbjct: 220 DDAGDICAVDY-YPIENPAPGIIQRQPVNRPMETGLLAIDSMFPIGCGQRELIIGDRQTG 278

Query: 174 KSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           K+ + L         D V I + +G++   V + +E     D L  ++VV AT+ ES  L
Sbjct: 279 KTAIALDTILNQKGKDIVCIYVAIGQKASSVAQLVETLRQHDALSYTIVVNATAGESATL 338

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   + EYF  KG NVL++ D +++ A + R ++      P    YP  VF   
Sbjct: 339 QYIAPYSGCALGEYFMHKGRNVLIVYDDLSKHAIAYRTLSLLLERSPGREAYPGDVFYLH 398

Query: 291 PRLLER---IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
            RLLER   + P E   G++TA+  V     + +  I  ++ SI DG I L   L   G+
Sbjct: 399 SRLLERSANLAP-EYGGGSMTALPIVETQAGDVSAYIPTNIISITDGQIFLESDLFHSGQ 457

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P V+   SVSR+   A +   KK   ++   + ++ E
Sbjct: 458 RPAVNVGLSVSRVGGAAQTKAMKKAAGAIRLDLAQYRE 495


>gi|157144369|ref|YP_001451687.1| F0F1 ATP synthase subunit alpha [Citrobacter koseri ATCC BAA-895]
 gi|166201659|sp|A8ACN8|ATPA_CITK8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157081574|gb|ABV11252.1| hypothetical protein CKO_00073 [Citrobacter koseri ATCC BAA-895]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG PIDG     KG +  +  S V    P  + RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGAPIDG-----KGPVEHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++  + D   K +   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+ ++VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LQNTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNVEYVEAFTKGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLETNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|14718103|gb|AAK72791.1| ATP synthase beta subunit [Lantana camara]
          Length = 283

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 137/264 (51%), Gaps = 15/264 (5%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P   G +IG+F 
Sbjct: 2   LGEPVDNLGPVDTGT-TFPIHRSAPXFIQLDTKLXIFETGIKVVDLLAPYRRGGKIGLFG 60

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKSVV 219
           G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S V
Sbjct: 61  GAGVGKTVLIMELIXNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKV 120

Query: 220 --VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276
             V    ++ P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   G +
Sbjct: 121 ALVYGQMNDPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRM 180

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   
Sbjct: 181 PSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATT 238

Query: 337 VLNRSLAEEGRYPPVDPLASVSRL 360
           VL+R LA +G YP VDPL S S +
Sbjct: 239 VLSRGLAAKGIYPAVDPLDSTSTM 262


>gi|88860635|ref|ZP_01135272.1| ATP synthase subunit A [Pseudoalteromonas tunicata D2]
 gi|88817230|gb|EAR27048.1| ATP synthase subunit A [Pseudoalteromonas tunicata D2]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G   +++ G  V   GR    P      GRV+N LG PIDG  +L
Sbjct: 62  IALNLERDSVGAVVMGPYADLTEGQKVLSTGRILEVPVGRGLLGRVVNTLGAPIDGKGAL 121

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                  E + K+ P  + RQ V++  +TG + ID   P+  GQR  V      GK+ L 
Sbjct: 122 DND--GFEPVEKIAPGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  +     K +   VG++   +   +   E++    L  ++VVVA++ ES  L+ +
Sbjct: 180 IDAIINQKGTGVKCVYVAVGQKASTIANVVRKLEEH--GALANTIVVVASASESAALQFL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APFAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +   G + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNADYVEKYTNGAVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE 402


>gi|218282098|ref|ZP_03488397.1| hypothetical protein EUBIFOR_00972 [Eubacterium biforme DSM 3989]
 gi|218216891|gb|EEC90429.1| hypothetical protein EUBIFOR_00972 [Eubacterium biforme DSM 3989]
          Length = 512

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 158/343 (46%), Gaps = 7/343 (2%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDG 115
           D  G V+ +  + V +  +G   +I  GD+V   G     P      GRV+NALG+PIDG
Sbjct: 59  DVYGMVMNLEDEQVGVVLLGDNSDIKEGDVVKRTGHIIEVPVGDSLMGRVVNALGQPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + + D +  +    P  M R+ V    +TG+++ID   P+  GQR  +      GK+
Sbjct: 119 LGEI-QTDKTRPVERVAPGVMTRKSVSVPLQTGLKIIDSMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
            +   ++  +     K I   +G++   V + +E       ++ + +V AT+ E+  L+ 
Sbjct: 178 AIAIDTILNQKGQNVKCIYVAIGQKASTVAQIVEKLKQHGAMEYTTIVAATASEAAPLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + E +   G++VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 238 IAPYAGCAMGEEWMENGEDVLIVYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +    G++TA+  +     + +  I  +V SI DG I L   +  EG  P 
Sbjct: 298 LLERAARLNENYGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLKTDMFNEGIRPS 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           VD   SVSR+   A +   K++  SL   + ++ E       G
Sbjct: 358 VDSGLSVSRVGSAAQTKAMKQVSGSLKLELAQYREMESFAKFG 400


>gi|149384839|gb|ABR25228.1| ATP synthase beta chain [Deparia lancea]
          Length = 383

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 31/333 (9%)

Query: 107 NALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           N LG+P+D   +LG  +   +  I    P            +TGI+V+D+  P   G +I
Sbjct: 1   NVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLLAPYRRGGKI 57

Query: 165 GVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL------ 214
           G+F G+G+GK+ L    ++  A++     V   +  ER RE  +   +     +      
Sbjct: 58  GLFGGAGVGKTVLTTESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNI 116

Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++ 
Sbjct: 117 SESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSA 176

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 177 LLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAH 234

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRDI 389
           LD   VL+R LA +G YP VDPL S S +  + W    +       +   + R++E +DI
Sbjct: 235 LDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGGEHYDTAQGVKQTLQRYKELQDI 293

Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
             I    PG+D + ++    V +   I  FL Q
Sbjct: 294 IAI----PGLDELSEEDRLTVARARKIERFLSQ 322


>gi|116512625|ref|YP_811532.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123025240|sp|Q02XA3|ATPA_LACLS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116108279|gb|ABJ73419.1| ATP synthase F1 subcomplex alpha subunit [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 500

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 9/328 (2%)

Query: 66  NLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   +  + +G+ +S+  GD V   G+   I       GRV+N LG+P+DG   L  G
Sbjct: 65  NLDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTG 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
             +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++ +   
Sbjct: 125 K-TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAI 183

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
                 D + I + +G++   VR  +E     D +  ++VV A++ +   L  +AP    
Sbjct: 184 LNQKGQDMICIYVAIGQKESTVRTQVETLRKLDAMDYTIVVTASASQPSPLLYIAPYAGA 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 244 AMGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +SV
Sbjct: 304 LSDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSSV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     KK+  +L   +  F E
Sbjct: 364 SRVGGAAQIKAMKKVAGTLRLDLASFRE 391


>gi|300721116|ref|YP_003710384.1| membrane-bound ATP synthase, F1 sector subunit alpha [Xenorhabdus
           nematophila ATCC 19061]
 gi|297627601|emb|CBJ88120.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 151/302 (50%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGAVEHDGFSPVEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  V      GK+ L   ++  + +   K I   +G++   +   +   E++    L+ 
Sbjct: 163 QRELVIGDRQTGKTALAIDAIINQRNSGIKCIYVAIGQKASTISNVVRKLEEH--GALEN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  SL   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESSLFNAGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|296160914|ref|ZP_06843726.1| ATP synthase F1, alpha subunit [Burkholderia sp. Ch1-1]
 gi|295888803|gb|EFG68609.1| ATP synthase F1, alpha subunit [Burkholderia sp. Ch1-1]
          Length = 518

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 136/267 (50%), Gaps = 6/267 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ LG+P+D D+ +      M I    P  ++R  V +  +TG+ ++D    +  GQ
Sbjct: 111 GRVIDPLGRPLDRDEPVSAAK-RMPIERPAPAIIDRDLVSEPVETGVLIVDALFAVGRGQ 169

Query: 163 RIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNL-KKSVV 219
           R  +      GK+ L L         D + I + +G+R   V++ IE        ++ V 
Sbjct: 170 RELIIGDRATGKTALALDAIVNQKHSDMICIYVAIGQRSTAVQQVIESVRRYGAPERCVF 229

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA +  +  L+ +AP   VTIAEYF  +G + L+++D +T+ A + RE+A  + E P  
Sbjct: 230 VVAPAASAAGLQWIAPFAGVTIAEYFRDRGQHALVVIDDLTKHAATHRELALLTREPPGR 289

Query: 280 RGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  +F    RLLER     ++   G++TA+     D  N +  I  ++ SI DG IV
Sbjct: 290 EAYPGDIFYVHARLLERAAKLSAKLGGGSLTALPIAETDAGNLSAYIPTNLISITDGQIV 349

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA 364
           L+ +L    + P VD   SVSR+  KA
Sbjct: 350 LDAALFAANQRPAVDVGLSVSRVGGKA 376


>gi|138896937|ref|YP_001127390.1| F0F1 ATP synthase subunit alpha [Geobacillus thermodenitrificans
           NG80-2]
 gi|158513842|sp|A4ITJ1|ATPA_GEOTN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|134268450|gb|ABO68645.1| ATPase alpha subunit [Geobacillus thermodenitrificans NG80-2]
          Length = 502

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ IV + P  GI E    GD V   GR    P      GRV+N LG+P+DG   +   +
Sbjct: 70  NVGIVILGPYTGIKE----GDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFA 182
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ + +    
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVAIDTIL 184

Query: 183 RSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
                D + I + +G++   VR  +E       L  ++VV A++ +   L  +AP   V+
Sbjct: 185 NQKGQDMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           + EYF  KG +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGAGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGAAQIKAMKKVSGTL 382


>gi|319940679|ref|ZP_08015021.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 3_1_45B]
 gi|319805830|gb|EFW02597.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 3_1_45B]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 185/394 (46%), Gaps = 31/394 (7%)

Query: 50  VHQGKNSDNLGQV--IRINLDIVYICPVGIGEE--ISLGDLVFHWGRFRISP-SACWCGR 104
           V QG+  +  G+V  + +NL+   +  V +GE   IS GD V   GR    P      GR
Sbjct: 47  VMQGEMLEFPGEVYGLALNLERDSVGAVILGEYEGISEGDTVKTTGRILSVPVGEELIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           V+NALG+PIDG   +     + +++ KV P  ++R+ V +  +TG++ ID   P+  GQR
Sbjct: 107 VVNALGQPIDGKGPINAK--AFDVVEKVAPGVIDRKSVSQPVQTGLKSIDSMVPIGRGQR 164

Query: 164 IGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFI---EDYLGDNLKKSV 218
             +      GK+ + +         D + + + +G++   +   +   E++    +  ++
Sbjct: 165 ELIIGDRQTGKTAVAIDTIINQKGKDLICVYVAIGQKASTIANVVAKLEEH--GAMDYTI 222

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV AT+ ES  ++ +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P 
Sbjct: 223 VVAATASESAAMQYLAPYAGATMGEYFRDRGQDSLIVYDDLTKQAWAYRQISLLLRRPPG 282

Query: 279 ARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIA 325
              YP  VF    RLLER              G  + + G++TA+  +     +    + 
Sbjct: 283 REAYPGDVFYLHSRLLERAARVNAEYVEKFTKGEIKGKTGSMTALPIIETQAGDVTAFVP 342

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P ++P  SVSR+   A +   KKL   +   + ++  
Sbjct: 343 TNVISITDGQIFLETDLFNAGIRPAINPGISVSRVGGAAQTKVIKKLGGGVRLALAQY-- 400

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            R +     +   +D +  K + +  ++ + +KQ
Sbjct: 401 -RALAAFAQFASDLDEVTRKQLERGRMVTELMKQ 433


>gi|126138816|ref|XP_001385931.1| Vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           [Scheffersomyces stipitis CBS 6054]
 gi|126093209|gb|ABN67902.1| Vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar
           proton pump B subunit) (V-ATPase 57 kDa subunit)
           [Scheffersomyces stipitis CBS 6054]
          Length = 508

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQV--IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV  +R +  IV +     G ++    + F     +I+ S    GR+ +  G+PID   
Sbjct: 65  GQVLEVRGSKAIVQVFEGTSGIDVKKTRVEFTGENLKIAVSEDMLGRIFDGSGRPIDKGP 124

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 125 KIFAEDY-LDINGSPINPFARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 183

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 184 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEENGSLERTSLFLN 243

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 244 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 303

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT V  + +  D+   PI D    I +G I ++R 
Sbjct: 304 YPGYMYTDLSTIYERAGRVEGRNGSITQVPILTMPNDDITHPIPDLTGYITEGQISIDRQ 363

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L   G YPP++ L S+SRL   A
Sbjct: 364 LHNRGIYPPINVLPSLSRLMKSA 386


>gi|25808401|gb|AAN74327.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 353

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 10  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 69

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 70  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 128

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 129 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 186

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + RE++      P    +P  VF    RLLER   
Sbjct: 187 AMGEYFRDHARHALIVYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLERAAK 246

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 247 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 306

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 307 SRVGGAAQIKATKQVSGTLRLDLAQYRE 334


>gi|325678692|ref|ZP_08158302.1| ATP synthase ab C terminal domain protein [Ruminococcus albus 8]
 gi|324109742|gb|EGC03948.1| ATP synthase ab C terminal domain protein [Ruminococcus albus 8]
          Length = 462

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 18/276 (6%)

Query: 98  SACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           S    GR+ N  GKPIDG   LG+   + S +I       ++R        TGI  ID  
Sbjct: 82  SGEMLGRIFNGAGKPIDG---LGEIVAEESRDINGSPLNPVSRVYPRNYINTGISSIDAL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFAR----SDCFDKVIISLVGERGREVREFIEDYLG 211
             L  GQ++ +F+GSG+  + L     R    +D   +    + G  G  V   + DY  
Sbjct: 139 MTLIRGQKLPIFSGSGLSHNKLAVQIVRQAKIADEAGQDFAVVFGAMG--VTNDVADYFR 196

Query: 212 DN------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264
            +      L++  + +  S++  I R + P  A+T AEY +  K  ++L+IL  +T +A 
Sbjct: 197 RSFEETGVLQRVAMFLNLSNDPIIERILTPKCALTCAEYLAFEKNMHILVILTDMTSYAE 256

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           ++RE +++ GE+P  +GYP  ++S+L  + ER G  +   G++T +  + +  D+   P+
Sbjct: 257 ALREFSSSKGEIPGRKGYPGYLYSDLAAIYERAGIVKGSSGSVTQIPILTMPNDDITHPV 316

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            D    I +G IVL+R+L   G YP V  L S+SRL
Sbjct: 317 PDLTGYITEGQIVLDRNLDATGIYPGVAILPSLSRL 352


>gi|258646350|ref|ZP_05733819.1| ATP synthase F1, alpha subunit [Dialister invisus DSM 15470]
 gi|260403748|gb|EEW97295.1| ATP synthase F1, alpha subunit [Dialister invisus DSM 15470]
          Length = 515

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 150/317 (47%), Gaps = 7/317 (2%)

Query: 75  VGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I  GD+V   GR    P      GRV+NALG+PIDG   + K D   +I  K P
Sbjct: 76  LGNAETIKEGDVVKRTGRLMQVPVGNAVIGRVVNALGQPIDGRGEI-KTDAYRDIEIKAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVII 192
              +RQ V    +TG++ ID   P+  GQR  +    G GK+ + +         D + I
Sbjct: 135 GIADRQPVNVPLQTGLKCIDSMVPIGRGQRELIIGDRGTGKTAIAIDTILNQKGQDVICI 194

Query: 193 SL-VGERGREV-REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + +G++   V R +        +  S++V A + E   ++ +AP + V+IAE+F  +G 
Sbjct: 195 YVSIGQKNSNVVRVYERLRAAGAMDYSIIVHAGASEGSPMQYLAPYSGVSIAEHFMHQGK 254

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           +VL+I D +++ A + R ++      P    YP  VF    RLLER          G+IT
Sbjct: 255 DVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAARLSDALGGGSIT 314

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     +    I  +V SI DG I L  +L   G  P ++   SVSR+   A    
Sbjct: 315 ALPIIETLAGDVGAYIPTNVISITDGQIYLETALFYSGIRPAINVGLSVSRVGGSAQIKA 374

Query: 369 EKKLVSSLTHLIHRFEE 385
            K++  +L   + +F E
Sbjct: 375 MKQVAGTLRLDLAQFRE 391


>gi|89095628|ref|ZP_01168522.1| F0F1 ATP synthase subunit alpha [Bacillus sp. NRRL B-14911]
 gi|89089374|gb|EAR68481.1| F0F1 ATP synthase subunit alpha [Bacillus sp. NRRL B-14911]
          Length = 502

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 149/317 (47%), Gaps = 10/317 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P     EI  GD V   GR    P      GRV+N LG+P+DG   +    +
Sbjct: 70  NVGIIILGPY---TEIREGDEVRRTGRIMEVPVGPELIGRVVNPLGQPVDGMGPINT-TV 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++  
Sbjct: 126 TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L+ ++VV A++ +   L  +AP   VT+
Sbjct: 186 QKDQDMVCIYVAIGQKESTVRNAVETLRKTGALEYTIVVTASASQPAPLLFLAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-- 299
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMYNGKHVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 305

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             K  G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DAKGAGSITALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSR 365

Query: 360 LADKAWSADEKKLVSSL 376
           +   A     KK+  +L
Sbjct: 366 VGGSAQIKAMKKVSGTL 382


>gi|67481369|ref|XP_656034.1| V-type ATPase, B subunit [Entamoeba histolytica HM-1:IMSS]
 gi|54401029|gb|AAV34290.1| vacuolar ATPase subunit B [Entamoeba histolytica]
 gi|56473213|gb|EAL50652.1| V-type ATPase, B subunit, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 496

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 142/287 (49%), Gaps = 18/287 (6%)

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           I  S    GRV N  GKP+D   ++   D  ++I  +     NR   E+  +TGI  ID+
Sbjct: 97  IPVSEDMLGRVFNGSGKPVDKGPNVIAEDY-LDINGQPINPANRVYPEEMIQTGISAIDV 155

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VIISLVGERG 199
              +  GQ+I +F+ +G+  + + +   R     K               ++ + +G   
Sbjct: 156 MNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKHKGLGVVDNHEDNFAIVFAAMGVNM 215

Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILD 257
              R F +D+  + ++++  + +  ++   I R + P  A+T AEYF+   D +VL+IL 
Sbjct: 216 ETARFFRQDFEENGSMERVTLFLNLANHPTIERIVTPRLALTTAEYFAYTCDMHVLVILT 275

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
            ++ +A ++RE++    E+P  RGYP  ++++L  + ER G      G+IT +  + +  
Sbjct: 276 DMSSYADALREVSAAREEVPGRRGYPGYMYTDLASIYERAGRVNGRVGSITQIPILTMPN 335

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           D+   PI D    I +G I ++R++     YPP++ L S+SRL   A
Sbjct: 336 DDITHPIPDLTGYITEGQIYVDRNMHNRQIYPPINVLPSLSRLMKSA 382


>gi|320580876|gb|EFW95098.1| vacuolar ATP synthase subunit B [Pichia angusta DL-1]
          Length = 507

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 155/323 (47%), Gaps = 19/323 (5%)

Query: 60  GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  D  +V +     G ++    + F     +I  S    GRV +  G+PID   
Sbjct: 64  GQVLEVKGDRAVVQVFEGTSGIDVKKTRVEFTGENLKIPVSEDMLGRVFDGSGRPIDNGP 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 124 RVFAEDY-LDINGSPINPFARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 182

Query: 178 LSMFARS--------DCFDK------VIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L ++ + + 
Sbjct: 183 AAQICRQAGLVRPTKDVQDGHEENFCIVFAAMGVNLETSRFFKQDFEENGSLDRTSLFLN 242

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 243 LANDPTIERIITPRLALTTAEYLAYQTEKHVLTILTDMSSYADALREVSAAREEVPGRRG 302

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R 
Sbjct: 303 YPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDRQ 362

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L+  G YPP++ L S+SRL   A
Sbjct: 363 LSNRGVYPPINVLPSLSRLMKSA 385


>gi|149384843|gb|ABR25230.1| ATP synthase beta chain [Deparia unifurcata]
          Length = 425

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 161/340 (47%), Gaps = 31/340 (9%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P            +TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+F G+G+GK+ L    ++  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLTTESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +V L +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   V +R LA +G YP VDPL S S +  + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           ++E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 330 YKELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|312977638|ref|ZP_07789385.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus CTV-05]
 gi|310895377|gb|EFQ44444.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus CTV-05]
          Length = 503

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 170/381 (44%), Gaps = 19/381 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           IS +  V Y    +++   L D +  +    DN    I  NL+   V I  +G  + I  
Sbjct: 25  ISEVGVVTYVGDGIARAHGLNDVLSGELLKFDNGSYGIAQNLESNDVGIIILGQFDNIRE 84

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG   + K D S  I +K P  M+RQ V+
Sbjct: 85  GDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTDKSRPIEAKAPGVMDRQSVD 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  G+R  +      GK++L +         D + I + VG++  
Sbjct: 144 QPLQTGIKAIDALVPIGRGERELIIGDRKTGKTSLAIDTILNQKGQDVICIYVAVGQKES 203

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 204 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGRDVLI 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER      +   G++TA+  
Sbjct: 259 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNDKLGGGSLTALPI 318

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 319 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 378

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             +L   +  + E       G
Sbjct: 379 AGTLRTDLAAYRELESFAQFG 399


>gi|310947784|gb|ADP50711.1| ATP synthase beta chain [Adiantum formosum]
          Length = 370

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    +       +S+ G  G   RE
Sbjct: 37  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTRE 96

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R     TA T+AEYF      +V
Sbjct: 97  GNDLYMETKESKVINEQNIAESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDINKRDV 156

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 157 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQA 214

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 215 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 273

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 274 ETAQGVKQTLQRYKELQDIIAILG 297


>gi|226944085|ref|YP_002799158.1| ATP synthase F1 subunit alpha [Azotobacter vinelandii DJ]
 gi|226719012|gb|ACO78183.1| ATP synthase F1, alpha subunit [Azotobacter vinelandii DJ]
          Length = 513

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 162/343 (47%), Gaps = 7/343 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
           +LG  + ++ D +    +  GE I+ G  V   G   R+   +   GRV++ LG+P+D D
Sbjct: 67  SLGFALSLDSDAIGAVLLDGGEGIAAGSEVHGTGEVLRVPVGSGLLGRVVDPLGRPLDRD 126

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           + +   D  + I    P  + R  V +  +TG+ ++D    +  GQR  +      GK+ 
Sbjct: 127 EPVTAEDW-LPIERPAPAIIERDLVSEPVETGVLIVDALFSVGRGQRELIIGDRATGKTA 185

Query: 177 L-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
           L L         + + + + VG+R   V++ +E        ++ V VVA +  SP L+ +
Sbjct: 186 LALDTIVNQKHSELICVYVAVGQRAGAVQQALEAVRRHGAAERCVFVVAPAASSPGLQWV 245

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    +IAEYF  +G + L+++D +++ A + RE++  + E P    YP  +F    RL
Sbjct: 246 APFAGFSIAEYFRDRGQHALIVIDDLSKHAATHRELSLLTHEPPGREAYPGDIFYLHARL 305

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+     +  N    I  ++ SI DG I L+  LA   + P V
Sbjct: 306 LERAAKLAPELGGGSLTALPIAQTEAGNLAAYIPTNLISITDGQIFLDSHLAAGNQRPAV 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           D   SVSR+  KA  A  +++   L     +F E       GG
Sbjct: 366 DVGLSVSRVGGKAQPAVLREVAGRLRLEYSQFLELEMFTRFGG 408


>gi|323490919|ref|ZP_08096114.1| ATP synthase subunit alpha [Planococcus donghaensis MPA1U2]
 gi|323395399|gb|EGA88250.1| ATP synthase subunit alpha [Planococcus donghaensis MPA1U2]
          Length = 502

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P    ++I  GD V   GR    P      GRV+N LG+P+DG   +     
Sbjct: 70  NVGIIILGPY---KDIKEGDEVRRTGRIMEVPVGNELIGRVVNPLGQPVDGLGPINTTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S  I S     M R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++  
Sbjct: 126 SRPIESPAQGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++D     I   +G++   VR  +E +  +  L  ++VV A++ +   L  +AP   +T+
Sbjct: 186 QADQDMICIYVAIGQKESTVRNVVETFRKNGALDYTIVVTASASQPAPLLYLAPYAGITM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  +G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 AEEFMFEGKHVLIVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +    G+ITA+  V     +    I  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 ETLGAGSITALPFVETQAGDIAAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  F E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLAAFRELESFSQFG 399


>gi|291276665|ref|YP_003516437.1| ATP synthase F1 sector subunit alpha [Helicobacter mustelae 12198]
 gi|290963859|emb|CBG39695.1| ATP synthase F1 sector alpha subunit [Helicobacter mustelae 12198]
          Length = 503

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 14/360 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G G+ I  G  V   G+  R+       GRVIN LG+P+DG   +   +    +
Sbjct: 72  VGVIVLGSGKNIREGTSVKRLGKLMRVPVGEGVVGRVINVLGEPLDGKGPIEASEYCF-V 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDC 186
             K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  +   
Sbjct: 131 EQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAVDTIINQKGQ 190

Query: 187 FDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
               I   +G++   V + +   E++    ++ +VVV A++ ES  ++ +AP T VTI E
Sbjct: 191 GVVCIYVAIGQKESTVAQVVRKLEEH--GAMEYTVVVNASAAESSAMQFLAPYTGVTIGE 248

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF     + L+I D +++ A + RE++      P    +P  VF    RLLER      +
Sbjct: 249 YFRDHAKHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLERAAKVSDD 308

Query: 304 K--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+ 
Sbjct: 309 KGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFSGIRPAINVGLSVSRVG 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++  +L   + ++   R+++    +   +D +  + + +   + + LKQ P
Sbjct: 369 GAAQIKATKQVAGTLRLDLAQY---RELQAFAQFASDLDEVSRRQLDRGQRMVEVLKQGP 425


>gi|297205776|ref|ZP_06923171.1| ATP synthase F1 sector alpha subunit [Lactobacillus jensenii
           JV-V16]
 gi|297148902|gb|EFH29200.1| ATP synthase F1 sector alpha subunit [Lactobacillus jensenii
           JV-V16]
          Length = 507

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 150/330 (45%), Gaps = 7/330 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 74  VGIIILGKYDNIREGDRVKRTGRIMEVPVGEALIGRVVNPLGQPVDGLGEI-KTDKTRPI 132

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK++L +         
Sbjct: 133 ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQ 192

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYF 245
           D + I + +G++   +R  +E           +VV     +P  L  +AP     + E F
Sbjct: 193 DVICIYVAIGQKESTIRSQVETLKRFGAMDYTIVVEAGPSAPAPLLYIAPYAGTAMGEEF 252

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-E 303
              G +VL++ D +++ A + RE++      P    YP  VF    RLLER    S+K  
Sbjct: 253 MYNGKDVLIVFDDLSKQAVAYRELSLLIRRPPGREAYPGDVFYIHSRLLERSAKLSDKLG 312

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVSR+   
Sbjct: 313 GGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGASVSRVGGS 372

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           A     KK+  +L   +  F E       G
Sbjct: 373 AQIKAMKKVAGTLRVDLASFRELESFAQFG 402


>gi|25808503|gb|AAN74378.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ + P + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLTPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|256850899|ref|ZP_05556288.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260661113|ref|ZP_05862027.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 115-3-CHN]
 gi|282934189|ref|ZP_06339467.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
 gi|256615961|gb|EEU21149.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260548050|gb|EEX24026.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 115-3-CHN]
 gi|281301803|gb|EFA94069.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
          Length = 504

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 150/330 (45%), Gaps = 7/330 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 71  VGIIILGKYDNIREGDRVKRTGRIMEVPVGEALIGRVVNPLGQPVDGLGEI-KTDKTRPI 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK++L +         
Sbjct: 130 ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQ 189

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYF 245
           D + I + +G++   +R  +E           +VV     +P  L  +AP     + E F
Sbjct: 190 DVICIYVAIGQKESTIRSQVETLKRFGAMDYTIVVEAGPSAPAPLLYIAPYAGTAMGEEF 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-E 303
              G +VL++ D +++ A + RE++      P    YP  VF    RLLER    S+K  
Sbjct: 250 MYNGKDVLIVFDDLSKQAVAYRELSLLIRRPPGREAYPGDVFYIHSRLLERSAKLSDKLG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVSR+   
Sbjct: 310 GGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGASVSRVGGS 369

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           A     KK+  +L   +  F E       G
Sbjct: 370 AQIKAMKKVAGTLRVDLASFRELESFAQFG 399


>gi|222084080|ref|YP_002519533.1| ATP synthase CF1 alpha chain [Keteleeria davidiana]
 gi|220983632|dbj|BAH11398.1| ATP synthase CF1 alpha chain [Keteleeria davidiana]
          Length = 507

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 18/336 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+    P S  + GRV+NAL +PID
Sbjct: 69  SDNVGAVL-----------MGDGLMIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK
Sbjct: 118 GKGQISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
           + + +    +     VI   V  G++   V + +  +     ++ ++VV  T+D S  L+
Sbjct: 177 TAVATDTIPNQKSQNVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSSATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     S+  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLSSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A     KK+   L   + +F E
Sbjct: 357 AINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|7636090|emb|CAB88710.1| ATPase subunit I [Spinacia oleracea]
          Length = 431

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 150/317 (47%), Gaps = 7/317 (2%)

Query: 75  VGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   + S  I S  P
Sbjct: 1   MGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEITASE-SRLIESPAP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M+R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +     VI  
Sbjct: 60  GIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICV 119

Query: 194 LV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD 250
            V  G++   V + + ++      +  +VVA + +SP  L+ +AP T   +AEYF  +  
Sbjct: 120 YVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRER 179

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKGNIT 308
           + L+I D +++ A + R+++      P    YP  VF    RLLER     S   +G++T
Sbjct: 180 HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMT 239

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A    
Sbjct: 240 ALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKA 299

Query: 369 EKKLVSSLTHLIHRFEE 385
            KK+   L   + +F E
Sbjct: 300 MKKVAGKLKLELAQFAE 316


>gi|196249754|ref|ZP_03148450.1| ATP synthase F1, alpha subunit [Geobacillus sp. G11MC16]
 gi|196210630|gb|EDY05393.1| ATP synthase F1, alpha subunit [Geobacillus sp. G11MC16]
          Length = 505

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ IV + P  GI E    GD V   GR    P      GRV+N LG+P+DG   +   +
Sbjct: 73  NVGIVILGPYTGIKE----GDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFA 182
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ + +    
Sbjct: 129 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVAIDTIL 187

Query: 183 RSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
                D + I + +G++   VR  +E       L  ++VV A++ +   L  +AP   V+
Sbjct: 188 NQKGQDMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVS 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           + EYF  KG +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEYFMYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 SDAKGAGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 367

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 368 RVGGAAQIKAMKKVSGTL 385


>gi|93007315|gb|ABE97162.1| AtpA [Pasteuria ramosa]
          Length = 504

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 155/333 (46%), Gaps = 7/333 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G V  + L+ V +  +G  E I  GD     GR    P      GR++N LG+P+DG  
Sbjct: 62  MGMVANLELENVGVVILGSCETIKEGDTAKRTGRLMEVPVGEQLLGRIVNPLGQPLDGLG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +    I +  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+T+
Sbjct: 122 PI-KTEHFRPIEANAPGVIDRRSVHQPLQTGIKAIDAMVPIGRGQRELIIGDRQTGKTTI 180

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              ++  + +   K I   +G++   V   +E     D L  + VVVA++ +   L  +A
Sbjct: 181 AIDTIINQKNTNVKCIYVAIGQKQSTVAHVVEKLRKHDALSYTTVVVASASDPFPLLFLA 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    ++ E+    G +VL + D +++ A S RE++      P    YP  VF    RLL
Sbjct: 241 PYAGCSMGEHIMYNGGHVLCVYDDLSKQAASYRELSLLLRRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     + +  I  +V SI DG I L  SL   G  P V+
Sbjct: 301 ERAAQLSDECGGGSLTALPLIETQAGDISAYIPTNVISITDGQIFLESSLFHSGIRPAVN 360

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A      K+  +L   + +++E
Sbjct: 361 VGFSVSRVGGAAQIKAMSKIAGTLRLDLSQYQE 393


>gi|14718214|gb|AAK72845.1| ATP synthase beta subunit [Schoepfia schreberi]
          Length = 283

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 142/267 (53%), Gaps = 21/267 (7%)

Query: 109 LGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 3   LGEPVD---NLGPVDTRTTSSIHRSAPDFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 59

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-----LGD-NLKK 216
           F G+G+GK+ L+    +  A++     V   +  ER RE  +  ++      + D N+ +
Sbjct: 60  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINDQNIAE 118

Query: 217 SVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273
           S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   
Sbjct: 119 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDANEQDVLLFIDNIFRFVQAGSEVSALL 178

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ ++ V  D+  DP   +  + LD
Sbjct: 179 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAIYVPADDLTDPAPATTFAHLD 236

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRL 360
              VL+R LA +G YP VDPL S S +
Sbjct: 237 ATTVLSRGLAAKGIYPAVDPLDSTSTM 263


>gi|299143387|ref|ZP_07036467.1| V-type ATP synthase alpha chain 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298517872|gb|EFI41611.1| V-type ATP synthase alpha chain 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 587

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 19/283 (6%)

Query: 131 KVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++P P   R  +++   +G RV D+F P+  G    +  G G GK+      A+    D 
Sbjct: 195 RIPRPIKERLPIDRLLVSGQRVFDVFFPIAKGGTAAIPGGFGTGKTMTQHQIAKYCDADI 254

Query: 190 VIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTI 241
           ++    GERG E+ E +ED+        G+ L    +++A +   P+  + A + T VTI
Sbjct: 255 IVYIGCGERGNEMTEVLEDFPKLIDPNTGNPLMDRTILIANTSNMPVAAREASIYTGVTI 314

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +V L+ DS +R+A ++REI+    E+P   GYP  + S + +  ER G  +
Sbjct: 315 AEYFRDQGYHVALMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAQFYERAGYVD 374

Query: 302 K---EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               ++G++T + +V   G + ++P+ ++ +  ++  + L++ LA    YP ++ + S S
Sbjct: 375 TLSGDEGSVTLIGAVSPVGGDFSEPVTENTKRFVNVFLALDKELAYARHYPAINWMNSYS 434

Query: 359 RLA-------DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +         D     D   L S    L+H+  +  +I ++ G
Sbjct: 435 QYVSLLKNYYDMHLDGDLDILRSKFLDLLHQEAKLNEIVMLVG 477


>gi|262038542|ref|ZP_06011911.1| ATP synthase F1, alpha subunit [Leptotrichia goodfellowii F0264]
 gi|261747411|gb|EEY34881.1| ATP synthase F1, alpha subunit [Leptotrichia goodfellowii F0264]
          Length = 501

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 9/329 (2%)

Query: 65  INLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSACW-CGRVINALGKPIDGDDSLGK 121
           +NL+   I  V  GE   I  G +V   G+    P+     GRV+N+LG+PIDG  S+  
Sbjct: 64  LNLEENNIGAVIFGETRGIKEGGIVKGTGKIAQVPAGEEILGRVVNSLGEPIDGKGSI-T 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--S 179
            +  M+I S     ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   +
Sbjct: 123 AEKYMDIESPAYGIIDRKPVSEPLQTGIKAIDGMVPIGRGQRELIIGDRQTGKTAIAIDA 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238
           +  +       I   +G++   V +  +    +  ++ + +V AT+ E+  L+ +AP   
Sbjct: 183 IINQKSNDVYCIYVAIGQKRSTVAQIYKKLEEEGAMEYTTIVAATASEAAPLQYLAPYAG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           V +AEYF  +G +VL++ D +++ A S RE++      P    YP  VF    RLLER  
Sbjct: 243 VAMAEYFMLQGKHVLIVYDDLSKHAVSYREMSLLLRRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               E   G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++P  S
Sbjct: 303 KLSDELGGGSITALPIVETKAGDISAYIPTNVISITDGQIFLETDLFNSGFRPAINPGVS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VSR+   A     K++ S +   + ++ E
Sbjct: 363 VSRVGGSAQIKAMKQVSSKVKIELAQYNE 391


>gi|313904301|ref|ZP_07837679.1| ATP synthase F1, alpha subunit [Eubacterium cellulosolvens 6]
 gi|313470851|gb|EFR66175.1| ATP synthase F1, alpha subunit [Eubacterium cellulosolvens 6]
          Length = 614

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 15/327 (4%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRVI+ALG PIDG + +   +    I    P  ++RQ V    +TGI  ID   P+  
Sbjct: 198 YIGRVIDALGNPIDGGEPINSTEFR-PIEQPAPGIVDRQPVNVPMETGILAIDSMFPIGR 256

Query: 161 GQRIGVFAGSGIGKS-----TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214
           GQR  +      GK+     T+L+   + DC+   I   +G++   +   +        +
Sbjct: 257 GQRELIIGDRQTGKTSIAIDTILNQKGK-DCY--CIYVGIGQKQSTIASLVNTLRTKGAM 313

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + ++VV +T+ +   L+ +AP +A ++AE+F  KG +VL++ D +++ A + R ++   G
Sbjct: 314 EYTIVVSSTASDPAPLQYVAPYSATSLAEHFMHKGKDVLIVYDDLSKHAVAYRTLSLLLG 373

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    YP  VF    RLLER     +    G+ITA+  +     + +  I  +V SI 
Sbjct: 374 RSPGREAYPGDVFYLHSRLLERSSRLSEALGGGSITALPIIETQDGDVSAYIPTNVISIT 433

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I L   L  EG+ P V+   SVSR+   A +   KK   SL   + +F   R++++ 
Sbjct: 434 DGQIFLESDLFFEGQRPAVNVGLSVSRVGGAAQTKAMKKAAGSLRIDLAQF---REMQVF 490

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             +   +D      + Q  ++ + LKQ
Sbjct: 491 TQFSSDLDEATKNQLKQGSVLMEMLKQ 517


>gi|325264434|ref|ZP_08131165.1| V-type sodium ATPase, B subunit [Clostridium sp. D5]
 gi|324030505|gb|EGB91789.1| V-type sodium ATPase, B subunit [Clostridium sp. D5]
          Length = 455

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 162/323 (50%), Gaps = 32/323 (9%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPID 114
           +G+++ I  D   I      E +SL +    L  H     +SP     GR  N +G+PID
Sbjct: 41  IGRIVEIYEDKAVIQVFEGSENMSLKNTHTRLTGHPMEIALSPD--MLGRTFNGIGQPID 98

Query: 115 GDDSLGKGDLSMEI-MSKVP--PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
               LG    +++  ++ +P  P M R+       TGI  ID  T L  GQ++ +F+G+G
Sbjct: 99  ---DLGPITSTLKRDVNGLPLNPVM-REYPRNYIHTGISAIDGLTTLIRGQKLPIFSGNG 154

Query: 172 IGKSTLLSMFARSDCFDK-------VIISLVGERGREVREFIEDYLGDNLKKSVVV---- 220
           +    L +   +     +       ++ + +G     V+  + D+     ++S V     
Sbjct: 155 LPHDQLAAQIVKQASLGENSEEQFAIVFAAMG-----VKHDVADFFRRTFEESGVADHVA 209

Query: 221 --VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
             +  +++  + R + P  A+T+AEY + + + ++L+IL  +T FA ++RE++++ GE+P
Sbjct: 210 MFLNLANDPVVERLITPKVALTVAEYLAFEQNMHILVILTDMTSFAEAMREVSSSKGEIP 269

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +G+P  ++SEL  + ER G  +   G++T +  + +  D+   PI D    I +G IV
Sbjct: 270 SRKGFPGYLYSELATIYERAGIVQGVNGSVTQLPILTMPNDDITHPIPDLTGYITEGQIV 329

Query: 338 LNRSLAEEGRYPPVDPLASVSRL 360
           L R L  +  YPP++ L S+SRL
Sbjct: 330 LERELHGQSIYPPINILPSLSRL 352


>gi|113461834|ref|YP_719903.1| F0F1 ATP synthase subunit alpha [Haemophilus somnus 129PT]
 gi|170718141|ref|YP_001785170.1| F0F1 ATP synthase subunit alpha [Haemophilus somnus 2336]
 gi|122945458|sp|Q0I5X1|ATPA_HAES1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739891|sp|B0UWG7|ATPA_HAES2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|112823877|gb|ABI25966.1| ATP synthase, F1 subunit alpha [Haemophilus somnus 129PT]
 gi|168826270|gb|ACA31641.1| ATP synthase F1, alpha subunit [Haemophilus somnus 2336]
          Length = 513

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 161/336 (47%), Gaps = 26/336 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  + R+ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGQPIDGKGEIKNDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDSMVPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L+ 
Sbjct: 163 QRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GALQN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERASRVSEEYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKVVKKLAGGIRTALAQY 400

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              R++     +   +D    K +     + + LKQ
Sbjct: 401 ---RELAAFAQFASDLDEATRKQLSHGQKVTELLKQ 433


>gi|260913587|ref|ZP_05920064.1| F-ATPase subunit alpha [Pasteurella dagmatis ATCC 43325]
 gi|260632363|gb|EEX50537.1| F-ATPase subunit alpha [Pasteurella dagmatis ATCC 43325]
          Length = 513

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG++  +  S V    P  ++R+ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGQPIDG-----KGEIVNDGFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMVPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+ ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERASRVNEDYVERFTKGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGSAQTKVVKKLAGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|149384831|gb|ABR25224.1| ATP synthase beta chain [Athyrium otophorum]
          Length = 426

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG    S    + +  PA  +   +   F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209
              G +IG+F G+G+GK+ L    ++  A++     V   +  ER RE      E  E  
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           + +  N+ +S V  V    +E P  R     TA T AEYF      +VLL +D+I RF  
Sbjct: 153 VTNEQNISESKVALVYGQMNEPPGARMRVGSTAPTTAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +  V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAAYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   V +R LA +G YP VDPL S S    + W   E+       +   + R
Sbjct: 271 PATTSAHLDATTVPSRGLAAKGIYPAVDPLDSTSTTL-QPWIVGEEHYDTAQGVKQTLQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|325105220|ref|YP_004274874.1| ATP synthase F1, alpha subunit [Pedobacter saltans DSM 12145]
 gi|324974068|gb|ADY53052.1| ATP synthase F1, alpha subunit [Pedobacter saltans DSM 12145]
          Length = 524

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 162/385 (42%), Gaps = 32/385 (8%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G V+ +  D V +  +G  +EI  GD +    R   I       GRV+N LG+PIDG   
Sbjct: 62  GIVLNLEEDNVGVVLLGPSDEIKEGDTIKRTNRIASIKVGEGMLGRVVNTLGQPIDGKGP 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      M +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GKS + 
Sbjct: 122 IAGETYEMPLERKAPGVIYRQPVTEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKSAVC 181

Query: 179 --SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPI 229
             ++  + + +D       I   VG++   V   ++  L +N  +  +VVV AT+ +   
Sbjct: 182 IDTIINQKEFYDAGQPVFCIYVAVGQKASTVANVVKT-LEENGAMAYTVVVSATAADPAP 240

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++  AP     I EYF   G   L+I D +++ A + RE++      P    YP  VF  
Sbjct: 241 MQFYAPFAGAAIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLKRPPGREAYPGDVFYL 300

Query: 290 LPRLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVR 329
             RLLER                         K  G++TA+  +     + +  I  +V 
Sbjct: 301 HSRLLERAAKVNSNDSIAQQMNDLPESIKHLVKGGGSLTALPIIETQAGDVSAYIPTNVI 360

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SI DG I L  +L   G  P ++   SVSR+   A     KK+  +L     ++ E    
Sbjct: 361 SITDGQIFLESNLFNAGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELEAF 420

Query: 390 RLIGG-YRPGVDLILDKAVHQVPII 413
              G        L+LDK    V I+
Sbjct: 421 SKFGSDLDASTKLVLDKGARNVEIL 445


>gi|228474853|ref|ZP_04059582.1| ATP synthase F1, alpha subunit [Staphylococcus hominis SK119]
 gi|314935946|ref|ZP_07843296.1| ATP synthase F1, alpha subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271085|gb|EEK12465.1| ATP synthase F1, alpha subunit [Staphylococcus hominis SK119]
 gi|313655952|gb|EFS19694.1| ATP synthase F1, alpha subunit [Staphylococcus hominis subsp.
           hominis C80]
          Length = 502

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 151/334 (45%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EI  GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---SEIREGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINSTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFAR 183
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+ +     
Sbjct: 126 TRPVEQKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIGIDTILN 185

Query: 184 SDCFDKVIISL-VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
               D + I + +G++   VR  +E       L  ++VV A++ E   L  +AP + VT+
Sbjct: 186 QKGLDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G NVL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKNVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DALGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 399


>gi|51598356|ref|YP_072544.1| V-type ATP synthase subunit B [Borrelia garinii PBi]
 gi|81691590|sp|Q662R9|VATB_BORGA RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|51572927|gb|AAU06952.1| V-type ATPase, subunit B [Borrelia garinii PBi]
          Length = 434

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    IS  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGISTSDEIKFLGHSMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPRDGGPSLD--DNLIEIGG--PSANPAKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLLRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ KG  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRTIFFVHTANDSVVESLTVPDISLSVAEKFALKGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITILTVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ S+  L    +++ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNGRTRDDHRTIMDSMIKLYASSKDSVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|169335791|ref|ZP_02862984.1| hypothetical protein ANASTE_02216 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258529|gb|EDS72495.1| hypothetical protein ANASTE_02216 [Anaerofustis stercorihominis DSM
           17244]
          Length = 502

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 157/339 (46%), Gaps = 23/339 (6%)

Query: 45  LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCG 103
           +G+ ++  G   D  G V+ +  D V    +G   +I  GD V   G+    P      G
Sbjct: 49  MGELILFPG---DVYGMVLNLEEDNVGCVLLGDDTDIVEGDTVKCTGKIMSVPVGDGVIG 105

Query: 104 RVINALGKPIDGDDSL-----GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
           RV+NALG+PIDG  S+      K D+      K    ++R+ V    +TG + ID   P+
Sbjct: 106 RVVNALGEPIDGKGSIVAEEYRKADV------KASGVIDRKSVTIPLQTGYKAIDSLIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV--GERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L      +   + V+   V  G++   V + +   E+Y    
Sbjct: 160 GRGQRELIIGDRQTGKTALAVDTILNQKGEDVLCVYVAIGQKASTVAQIVGTLEEY--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           +  + VV AT+ E   L+ +AP +   IAEYF  KG +VL++ D +++ A + R +    
Sbjct: 218 MDYTTVVCATASEMAPLQYLAPYSGCAIAEYFMDKGKDVLIVYDDLSKHAVAYRSMTLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
              P    YP  VF    RLLER    EK  G+ITA+  +     + +  I  +V SI D
Sbjct: 278 RRPPGREAYPGDVFYLHSRLLERAARLEK-GGSITALPIIETQAGDISAYIPTNVISITD 336

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           G I L   L   G  P V+P  SVSR+   A  +  KK+
Sbjct: 337 GQIFLETELFNAGVRPAVNPGISVSRVGGSAQISTMKKV 375


>gi|126723802|gb|ABO26815.1| ATP synthase CF1 alpha subunit [Carthamus tinctorius]
          Length = 508

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 170/368 (46%), Gaps = 12/368 (3%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +
Sbjct: 63  IALNLESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 SSSEYRL-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPL 236
               +     VI   V  G++   V + + ++      +  +VVA + +SP  L+ +AP 
Sbjct: 182 DTILNQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPEREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   L   + +F E   +     +   +D      + +   + 
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKLKLELAQFAE---LEAFAQFSSDLDKATQNQLARGQRLR 418

Query: 415 DFLKQSPS 422
           + LKQS S
Sbjct: 419 ELLKQSQS 426


>gi|89899964|ref|YP_522435.1| F0F1 ATP synthase subunit alpha [Rhodoferax ferrireducens T118]
 gi|119367950|sp|Q21Z99|ATPA2_RHOFD RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|89344701|gb|ABD68904.1| ATP synthase F1, alpha subunit [Rhodoferax ferrireducens T118]
          Length = 534

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           I  N+D   I  V +GE   +  GD V   GR   ++      GRVI+ LG+P+DG   +
Sbjct: 68  IAFNVDEAEIGVVLLGEYWHLHAGDEVDRTGRVMDVAVGDGLLGRVIDPLGRPLDGRGPV 127

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
                 + I     P M+R  V    +TG++VID   P+  GQR  +      GK+ +  
Sbjct: 128 ASSH-RLPIERPASPIMDRAPVTVPLQTGLKVIDALIPVGRGQRELILGDRQTGKTAIAI 186

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
            ++  +       +   +G+R   V + +        +  + VVV   ++ P L  +AP 
Sbjct: 187 DTILNQQGQNVLCVYCAIGQRASAVAKVVATLREKGAMDFTTVVVTEGNDPPGLAYIAPY 246

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAE+F   G +VL++ D +T+ A + RE++      P    +P  +F    RLLER
Sbjct: 247 AATSIAEHFMEAGRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLER 306

Query: 297 IGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +E+  G++TA+  +     N +  I  ++ SI DG I L+ SL E G  P VD  
Sbjct: 307 ATHLRQERGGGSLTALPIIETQAQNISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVG 366

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+  KA     + +   L     +FEE
Sbjct: 367 KSVSRVGGKAQRTAYRAVAGDLKLAYAQFEE 397


>gi|332990716|gb|AEF09699.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 513

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELLIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|4126681|dbj|BAA36692.1| vacuolar-type H+-ATPase subunit B [Ascidia sydneiensis samea]
          Length = 509

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 171/386 (44%), Gaps = 30/386 (7%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLS------QYVCLGDF----VVHQGKNSD 57
           +AQL+      L V   YIS     Y TV+ ++      + V    F     ++    + 
Sbjct: 7   MAQLSAAKEHALAVSRDYISQPRLTYQTVSGVNGPLVILEKVKFAKFAEIVTLNLADGTQ 66

Query: 58  NLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115
             GQV+ ++ D  +V +     G +       F     RI  S    GR+ N  GKPID 
Sbjct: 67  RSGQVLEVSGDKAVVQVFEGTSGIDAKHTTCEFTGDILRIPTSEDMLGRIFNGSGKPIDK 126

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             S+   D  ++I  +     +R   E+  +TGI  ID    +  GQ+I +F+ +G+  +
Sbjct: 127 GPSVLPEDY-LDIQGQPINPKSRIYPEEMIQTGISAIDTMNSIARGQKIPIFSANGLPHN 185

Query: 176 TLLSMFARS---------DCFDK------VIISLVGERGREVREFIEDYLGDNLKKSVVV 220
            + +   R          D  D       ++ + +G      R F  D+       +V +
Sbjct: 186 EIAAQICRQGGLVKLPDKDVMDSHEDNFAIVFAAMGVNMEAARFFKSDFEQHGSMDNVCL 245

Query: 221 VATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278
                  P I R + P  A+T AE+ + + + +VL+IL  ++ +A ++RE++    E+P 
Sbjct: 246 FLNLANDPTIERIITPRIALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPG 305

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RG+P  ++++L  + ER G      G+IT +  + +  D+   PI D    I +G I +
Sbjct: 306 RRGFPGYMYTDLATIYERAGRVNGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYI 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA 364
           +R L     YPP++ L S+SRL   A
Sbjct: 366 DRQLHNRQIYPPINVLPSLSRLMKSA 391


>gi|320528235|ref|ZP_08029399.1| ATP synthase [Solobacterium moorei F0204]
 gi|320131408|gb|EFW23974.1| ATP synthase [Solobacterium moorei F0204]
          Length = 472

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 144/303 (47%), Gaps = 19/303 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR  N +G PID   +LG   ++   ++  K    ++R+       TGI  ID    L  
Sbjct: 87  GRTFNGVGDPID---NLGPVYINKYEDVNGKPLNPVSREYPRNYINTGISAIDGLNTLIR 143

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK-------VIISLVGERGREVREFIEDYLGDN 213
           GQ++ +F+GSG+    L S   R             ++   +G +      F   +    
Sbjct: 144 GQKLPIFSGSGLPHDKLASQIVRQASLTGQDAENFCIVFGAMGVKNDVADTFRRSFEETG 203

Query: 214 LKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271
           +   V +     + PIL R M P  A+T AEY + + D NVL+IL  +T +  ++RE ++
Sbjct: 204 VMDKVCMFINLSDDPILERIMTPRCALTAAEYLAYECDMNVLVILTDMTAYCEAVREFSS 263

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           + GE+P  +G+P  ++S+L  L ER G  +  KG++T +  + +  D+   P+ D    I
Sbjct: 264 SKGEIPSRKGFPGYMYSDLASLYERAGIVKGGKGSVTQIPILTMPNDDITHPVPDLTGYI 323

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEET 386
            +G IVL+R L      PP+  L+S+SRL      +    AD + + + L     + ++ 
Sbjct: 324 TEGQIVLDRDLYLNNINPPIGILSSLSRLMKDGIGEGYTRADHQDVANQLFACYAKVQDA 383

Query: 387 RDI 389
           R +
Sbjct: 384 RSL 386


>gi|195953388|ref|YP_002121678.1| F0F1 ATP synthase subunit alpha [Hydrogenobaculum sp. Y04AAS1]
 gi|226739897|sp|B4U989|ATPA_HYDS0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|195933000|gb|ACG57700.1| ATP synthase F1, alpha subunit [Hydrogenobaculum sp. Y04AAS1]
          Length = 502

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 18/377 (4%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
           +S   G    +  D V I  +G    I  G +V   GR   +P      GRVI+ LG P+
Sbjct: 56  DSGEAGLAFNLEEDNVGIIILGSESGIKEGSIVKRTGRILDAPVGEELVGRVIDPLGNPL 115

Query: 114 DGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           DG     KG ++ +  S V    P  + R+ V +  +TGI+ ID   P+  GQR  +   
Sbjct: 116 DG-----KGPINAKHRSPVEKIAPGIVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGD 170

Query: 170 SGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
              GK+T+   ++  + D     I   +G++       IE    +  +K + VVVA++ +
Sbjct: 171 RATGKTTVAIDTILNQKDTDVYCIYVAIGQKKSTTARIIELLEREGAMKYTTVVVASATD 230

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP T  TI EYF   G + L++ D +++ A + R+++      P    YP  V
Sbjct: 231 PAPLQYLAPFTGCTIGEYFRDNGKHALIVYDDLSKHAEAYRQLSLLVRRPPGREAYPGDV 290

Query: 287 FSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 291 FYLHSRLLERAAKLYDELGAGSLTALPIIETKAGDVSAYIPTNVISITDGQIYLEPDLFN 350

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P ++   SVSR+   A     K++  +L   + +F   R++     +   +D    
Sbjct: 351 KGIRPAINVGLSVSRVGGSAQIKAMKQVAGTLRLDLAQF---RELEAFMQFASDLDKATQ 407

Query: 405 KAVHQVPIIYDFLKQSP 421
             +++   + + LKQ P
Sbjct: 408 DTINRGLRLVELLKQGP 424


>gi|156739742|gb|ABU93524.1| ATP synthase beta subunit [Dryopteris bissetiana]
          Length = 394

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 22/309 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 36  LGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 92

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 93  RGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGYDLYMEMKESKVIN 152

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +  
Sbjct: 153 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQAGS 212

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E +     +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 213 EFSALLVRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 270

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R++E
Sbjct: 271 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRYKE 329

Query: 386 TRDIRLIGG 394
            +DI  I G
Sbjct: 330 LQDIIAILG 338


>gi|14718040|gb|AAK72761.1| ATP synthase beta subunit [Elaeocarpus sphaericus]
          Length = 282

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 139/266 (52%), Gaps = 19/266 (7%)

Query: 109 LGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+          +N+ +S
Sbjct: 59  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAES 118

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   G
Sbjct: 119 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLG 178

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD 
Sbjct: 179 RMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDA 236

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRL 360
             VL+R LA +G YP VDPL S S +
Sbjct: 237 TTVLSRGLAAKGIYPAVDPLDSTSTM 262


>gi|14718117|gb|AAK72798.1| ATP synthase beta subunit [Lythrum salicaria]
          Length = 472

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 131 FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 190

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 191 GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 250

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +  A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 251 LLFIDNIFRFVQAGSEVSALLGRMXSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQA 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 309 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 369 TAQRVKETLQRYKELQDIIAILG 391


>gi|297183582|gb|ADI19709.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 511

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 156/340 (45%), Gaps = 14/340 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G    I  GD V   G    +P      GRV++ LG PIDG D+
Sbjct: 61  GMALNLESDNVGVVIFGDDRNIKEGDTVKRTGSIVDAPVGKELLGRVVDGLGNPIDGKDA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           L KG     +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK+   
Sbjct: 121 LDKGLKRNRVEVKAPGIIPRQSVSEPVQTGLKAIDSLIPIGRGQRELIIGDRQTGKTAVA 180

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDES 227
             T+++    +   D+      I   +G++   V + ++       ++ + +V AT+ + 
Sbjct: 181 IDTIINQKEINQSGDEKQKLYCIYVAIGQKRSTVAQIVKTLQDAGAMEYTTIVSATASDP 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP T  TI EYF   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 241 APLQFLAPYTGCTIGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 288 SELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 301 YLHSRLLERAAKLNDKNGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNQ 360

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P V+   SVSR+   A +   KK+  S+   + ++ E
Sbjct: 361 GIRPAVNVGLSVSRVGSAAQTKAMKKVAGSIKLELAQYRE 400


>gi|150388191|ref|YP_001318240.1| ATP synthase F1, alpha subunit [Alkaliphilus metalliredigens QYMF]
 gi|166990351|sp|A6TK63|ATPA_ALKMQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149948053|gb|ABR46581.1| ATP synthase F1, alpha subunit [Alkaliphilus metalliredigens QYMF]
          Length = 505

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 9/333 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G  ++I  GD V   GR    P      GRV+N+LG+PIDG   
Sbjct: 61  GMALNLEEDNVGCVLLGSDDKIKEGDTVKRTGRIVEVPVGEALLGRVVNSLGQPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + + D   +I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 121 I-QTDKYRDIERVAPGIIARKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
           +         D + I + +G++   V + I+D L  N  ++ +++V +T+ E   L+ +A
Sbjct: 180 IDTIINQKHSDVICIYVAIGQKKSTVSQ-IQDTLEKNGAMEYTIIVASTASELAPLQYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G +VL+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 239 PYAGCAMGEEFMENGKHVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E+  G++TA+  +     + +  I  +V SI DG I L   L   G  P V+
Sbjct: 299 ERAAKLSDERGGGSLTALPLIETQAGDVSAYIPTNVISITDGQIFLESELFYSGVRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P  SVSR+   A     KK+  +L   + ++ E
Sbjct: 359 PGISVSRVGGNAQIKAMKKVAGTLRLELAQYRE 391


>gi|223983272|ref|ZP_03633465.1| hypothetical protein HOLDEFILI_00745 [Holdemania filiformis DSM
           12042]
 gi|223964765|gb|EEF69084.1| hypothetical protein HOLDEFILI_00745 [Holdemania filiformis DSM
           12042]
          Length = 506

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 154/338 (45%), Gaps = 13/338 (3%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDG 115
           D  G V+ +  D V    +G    I  GD V   GR    P      GRV+NALG+PIDG
Sbjct: 58  DVYGMVLNLEEDHVGAVLLGDDTLIKEGDEVKRTGRIVEVPVGDGMLGRVVNALGQPIDG 117

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D +  +    P  M R+ V +   TG+++ID   P+  GQR  +      GK+
Sbjct: 118 KGPIAS-DKTRPVERVAPGVMTRKSVHQPLMTGLKIIDSMIPIGKGQRELIIGDRQTGKT 176

Query: 176 -----TLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPI 229
                T+L+   + D +   I   +G++   V + +E     D +  + +V AT+ E   
Sbjct: 177 AIAVDTILNQKGQ-DVY--CIYVAIGQKASTVAQIMEKLRQHDAMDYTTIVAATASEMAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP     I E +  +G +VL+I D +++ A + R ++      P    YP  VF  
Sbjct: 234 LQYLAPYAGCAIGEEWMEQGKDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G 
Sbjct: 294 HSRLLERAAKLNDELGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNAGV 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P VD   SVSR+   A +   K++  SL   + ++ E
Sbjct: 354 RPAVDSGLSVSRVGSAAQTKAMKQVSGSLKLDLAQYHE 391


>gi|6686912|emb|CAB64774.1| ATP synthase beta subunit [Byblis gigantea]
          Length = 278

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 33  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 92

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 93  GNDLYMEMKESGVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 152

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 153 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 210

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 211 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 258


>gi|149384483|gb|ABR25064.1| ATP synthase beta chain [Hypolepis tenuifolia]
          Length = 385

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 148/304 (48%), Gaps = 18/304 (5%)

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    + +   +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 1   ISNVLGEPVDNPGPV-QSRTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKI 59

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215
           G+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+           N+ 
Sbjct: 60  GLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKVINEQNIS 119

Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
           +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  E++  
Sbjct: 120 ESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNILRFVQAGSEVSAL 179

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 180 LGRMPSAVGYQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTSAHL 237

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIR 390
           D   VL+R LA +G YP VDPL S S ++ + W   E+       +   + R++E +DI 
Sbjct: 238 DATTVLSRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRYKELQDII 296

Query: 391 LIGG 394
            I G
Sbjct: 297 AILG 300


>gi|154308715|ref|XP_001553693.1| hypothetical protein BC1G_07780 [Botryotinia fuckeliana B05.10]
 gi|150852731|gb|EDN27923.1| hypothetical protein BC1G_07780 [Botryotinia fuckeliana B05.10]
          Length = 561

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 17/330 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ALG PIDG   + K         K P  + RQ V +  +TG++ +D   P+  GQ
Sbjct: 157 GRVIDALGNPIDGKGPI-KTTEKRRAQLKAPGILPRQSVNQPVQTGLKSVDAMVPIGRGQ 215

Query: 163 RIGVFAGSGIGKST-----LLSMFARSDCFDKV-----IISLVGERGREVREFIEDYL-G 211
           R  +      GK+      +L+    +D  D+      +   VG++   V + ++     
Sbjct: 216 RELIIGDRQTGKTAVALDAMLNQKRWNDGNDETKKLYCVYVAVGQKRSTVAQLVKTLEEN 275

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D +K S+VV AT+ E+  L+ +AP T  +I EYF   G + L+I D +++ A + R+++ 
Sbjct: 276 DAMKYSIVVAATASEAAPLQYIAPFTGTSIGEYFRDNGKHALIIFDDLSKQAVAYRQMSL 335

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVR 329
                P    YP  VF    RLLER      +   G++TA+  +   G + +  I  +V 
Sbjct: 336 LLRRPPGREAYPGDVFYLHSRLLERAAKMNDKLGGGSLTALPIIETQGGDVSAYIPTNVI 395

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SI DG I L   L  +G  P ++   SVSR+   A     K++  SL   + ++   R++
Sbjct: 396 SITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQY---REV 452

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                +   +D    + +++   + + LKQ
Sbjct: 453 AAFAQFGSDLDAATKQTLNRGERLTELLKQ 482


>gi|11465567|ref|NP_045041.1| ATP synthase CF1 alpha subunit [Cyanidium caldarium]
 gi|14547918|sp|Q9TM26|ATPA_CYACA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|6466423|gb|AAF13005.1|AF022186_177 unknown [Cyanidium caldarium]
          Length = 504

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 158/335 (47%), Gaps = 11/335 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G G +I  G  V   G+  +I       GRV+NALG PIDG  
Sbjct: 61  IGIALNLETDNVGAVLMGDGRDILEGSSVKGTGKIAQIGVGDNLLGRVLNALGNPIDGKP 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +    D  + I    P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++
Sbjct: 121 NPNSTDYRL-IEFNAPGIVSRRSVCEPIQTGITAIDAMIPIGRGQRELIIGDRQTGKTSI 179

Query: 178 L--SMFARSDCFDKVIISLVGERGREVRE---FIEDYLGDNLKKSVVVVATSDESPILRK 232
              ++  + +     I   +G++   V +    +E+   D LK +VV+ A ++E   L+ 
Sbjct: 180 ALDTIINQKEENVICIYVAIGQKASSVAQAVTLLEEK--DALKYTVVIAANANEPATLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   IAE+F  KG   L+I D +T+ A + R+++      P    YP  VF    R
Sbjct: 238 IAPYTGAAIAEHFMYKGLATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 298 LLERAAKLNNELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPS 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A     K++   L   + +F+E
Sbjct: 358 INVGISVSRVGSAAQIKAMKQVAGKLKLELAQFDE 392


>gi|237785859|ref|YP_002906564.1| F0F1 ATP synthase subunit alpha [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758771|gb|ACR18021.1| ATP synthase alpha chain [Corynebacterium kroppenstedtii DSM 44385]
          Length = 558

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 176/378 (46%), Gaps = 24/378 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 74  IGVAQNLDTDKVGVVVLGSYETLREGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLG 133

Query: 118 SL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           S+  + D  +E+  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 134 SIEAEEDRVLEL--QAPSVLMRQPVEEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 191

Query: 176 ----TLLSMFARSDCFD-----KVIISLVGERGRE---VREFIEDYLGDNLKKSVVVVAT 223
               T+++  A  +  D     + I   +G++G     VR+ +ED     L  + +V A 
Sbjct: 192 VCLDTIINQKANWESGDPEKQVRCIYVAIGQKGSTIAGVRKTLED--NGALDYTTIVAAP 249

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP     + +++  KG +VL+I D +T+ A + R I+      P    YP
Sbjct: 250 ASDSAGFKWLAPFAGAALGQHWMYKGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 309

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   
Sbjct: 310 GDVFYLHSRLLERAAKLSDDLGGGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESD 369

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D 
Sbjct: 370 LFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRIDLAAY---RDLEAFAAFASDLDD 426

Query: 402 ILDKAVHQVPIIYDFLKQ 419
                + +   + + LKQ
Sbjct: 427 SSKAQLERGSRLVELLKQ 444


>gi|224418193|ref|ZP_03656199.1| F0F1 ATP synthase subunit alpha [Helicobacter canadensis MIT
           98-5491]
 gi|253827520|ref|ZP_04870405.1| ATP synthase F1, subunit alpha [Helicobacter canadensis MIT
           98-5491]
 gi|313141728|ref|ZP_07803921.1| ATP synthase subunit alpha [Helicobacter canadensis MIT 98-5491]
 gi|253510926|gb|EES89585.1| ATP synthase F1, subunit alpha [Helicobacter canadensis MIT
           98-5491]
 gi|313130759|gb|EFR48376.1| ATP synthase subunit alpha [Helicobacter canadensis MIT 98-5491]
          Length = 504

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 14/360 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G G+EI  G  V   G+  R+       GRV+NALG+PIDG  ++   +    +
Sbjct: 73  VGVVVLGAGKEIKEGTSVKRLGKLLRVPVGDDLMGRVVNALGEPIDGKGAIEAKEFKF-M 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
             K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ +         
Sbjct: 132 EEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTIINQKGQ 191

Query: 188 DKVIISL-VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D V I + +G++   V + +   E++    ++ +++V A + +S  ++ +AP   VT+ E
Sbjct: 192 DVVCIYVAIGQKESTVAQVVRKLEEH--GAMEYTIIVNAPASDSAAMQYLAPYAGVTMGE 249

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF   G + L++ D +++ A + RE++      P    +P  VF    RLLER      E
Sbjct: 250 YFRDNGRHALIVYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSRLLERAAKVSDE 309

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+  +     +    I  +V SI DG I L   L   G  P ++   SVSR+ 
Sbjct: 310 LGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPAINVGLSVSRVG 369

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++  +L   + ++   R+++    +   +D    K + +   + + LKQ P
Sbjct: 370 GAAQIKATKQVSGTLRLDLAQY---RELQAFAQFASDLDESSRKQLDRGQRMVEVLKQPP 426


>gi|161511811|emb|CAP16916.1| ATP synthase alpha subunit [Pediococcus inopinatus]
          Length = 340

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 145/314 (46%), Gaps = 11/314 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 26  GMVQNLESNDVGIVILGGYDDIREGDTVKRTGRIMEVPVGDALVGRVVNTLGQPIDGKGE 85

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 86  I-KTDHTRPVERKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 144

Query: 179 --SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D     I   +G++   VR   + +E Y    +  ++V+ A   E   +  +
Sbjct: 145 IDTILNQKDQNIICIYVAIGQKESTVRTQVDTLEKY--GAMDYTIVLSAGPSEPAPMLYL 202

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RL
Sbjct: 203 APYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRL 262

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  V     +    I  +V SI DG I L+  L   G  P +
Sbjct: 263 LERAAKLNDELGAGSMTALPFVETKAGDIAAYIPTNVISITDGQIFLDSDLFYSGTRPAI 322

Query: 352 DPLASVSRLADKAW 365
           D  +SVSR+   A 
Sbjct: 323 DAGSSVSRVGGDAQ 336


>gi|14717938|gb|AAK72711.1| ATP synthase beta subunit [Apocynum androsaemifolium]
          Length = 286

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 14/237 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 41  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 100

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 101 GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 160

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 161 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 218

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 219 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEE 275


>gi|49474712|ref|YP_032754.1| F0F1 ATP synthase subunit alpha [Bartonella quintana str. Toulouse]
 gi|81695985|sp|Q6FYM1|ATPA_BARQU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49240216|emb|CAF26684.1| ATP synthase alpha chain [Bartonella quintana str. Toulouse]
          Length = 511

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 19/343 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + + +D V +   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMALNLEIDNVGVVIFGSDRDIREGDSVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-L 177
           L K      +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK+  L
Sbjct: 121 L-KATERRRVDVKAPGIIPRQSVHEPMPTGLKAIDALIPIGRGQRELVIGDRQTGKTAIL 179

Query: 178 LSMFARSDCF---------DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVATS 224
           L  F     F         DKV  I   +G++   V +F++  +  G  L+ S++V AT+
Sbjct: 180 LDTFLNQKPFHEKGAGNEQDKVYCIYVAIGQKRSTVAQFVKVLEERG-ALEYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP 
Sbjct: 239 SDPAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L  +L
Sbjct: 299 DVFYLHSRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 359 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 401


>gi|319893056|ref|YP_004149931.1| ATP synthase alpha chain [Staphylococcus pseudintermedius HKU10-03]
 gi|317162752|gb|ADV06295.1| ATP synthase alpha chain [Staphylococcus pseudintermedius HKU10-03]
 gi|323463889|gb|ADX76042.1| ATP synthase F1, alpha subunit [Staphylococcus pseudintermedius
           ED99]
          Length = 503

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 149/317 (47%), Gaps = 10/317 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P    +EI  GD V   GR    P      GRV+N+LG+PIDG   L     
Sbjct: 70  NVGVVILGPY---DEIKEGDEVKRTGRIMEVPVGEELIGRVVNSLGQPIDGQGPLNTTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  I  K    M R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 126 TRPIEKKATGVMARKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   +  +AP   VT+
Sbjct: 186 QKDQDMICIYVAIGQKESTVRAAVEKLRQAGALDYTIVVSASAAQPAPMLYIAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 AEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  V     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPFVETQAGDISAYVPTNVISITDGQIFLQSDLFFSGIRPAINAGLSVSR 365

Query: 360 LADKAWSADEKKLVSSL 376
           +   A     KK+  +L
Sbjct: 366 VGGSAQIKAMKKVAGTL 382


>gi|55056906|emb|CAF21954.1| ATP synthase beta subunit [Phyllocladus trichomanoides]
          Length = 319

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 15/256 (5%)

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIED 208
           +D+  P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   +
Sbjct: 1   VDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYME 60

Query: 209 YLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
                +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I
Sbjct: 61  MKESGVIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNI 120

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+
Sbjct: 121 FRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADD 178

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
             DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +  
Sbjct: 179 LTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQ 238

Query: 379 LIHRFEETRDIRLIGG 394
            + R++E +DI  I G
Sbjct: 239 TLQRYKELQDIIAILG 254


>gi|9799478|gb|AAF98989.1| ATP synthase beta subunit [Choristylis rhamnoides]
          Length = 490

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D   +LG  D S    I    P  +        F+TGI+V+D+  
Sbjct: 96  GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211
           P   G +IG F   G G S L+     +       +S+  E G   R   + Y+      
Sbjct: 153 PYRRGGKIGFFGEXGXGXSXLIMELIDNIAKAHXGVSVFXEVGERTRXGNDLYMEMKESG 212

Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264
               +N+ +S V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  
Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383
             +  + LD   VL+R LA +G YP VDPL S S +       +E  +    +   + R+
Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 391 KELQDIIAILG 401


>gi|116618947|ref|YP_819318.1| F0F1 ATP synthase subunit alpha [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431392|ref|ZP_03913443.1| F0F1 ATP synthase subunit alpha [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122270853|sp|Q03V27|ATPA_LEUMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116097794|gb|ABJ62945.1| ATP synthase F1 subcomplex alpha subunit [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|227352855|gb|EEJ43030.1| F0F1 ATP synthase subunit alpha [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 505

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 151/331 (45%), Gaps = 9/331 (2%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+NALG+PIDG   + K D +  +
Sbjct: 71  VGIIILGGFDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGLGEI-KTDKTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDC 186
             K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK++L   ++  + D 
Sbjct: 130 EVKAPGVMERKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKDQ 189

Query: 187 FDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              VI   +G++   VR  +E    +G      VV    S+ +P+L  +AP     + E 
Sbjct: 190 NMIVIYVAIGQKNSTVRAQVETLRQMGAMDYTIVVNAGPSEPAPMLY-LAPYVGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 249 FMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDEL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG + L+      G  P +D   SVSR+  
Sbjct: 309 GGGSMTALPFIETQAGDVSAYIPTNVISITDGQVFLDADQFYAGVRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            A     KK+  +L   +  F E       G
Sbjct: 369 DAQIKAMKKVAGTLRLDLASFRELESFAQFG 399


>gi|313885485|ref|ZP_07819235.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619215|gb|EFR30654.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 506

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 171/379 (45%), Gaps = 10/379 (2%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           D LG  + +  + V I  +G    I   D V+      + +      GRV++ALG PID 
Sbjct: 57  DTLGMALNLEENQVGIIVLGDDTNIKEDDSVYRTNHIVQTNVGDNLAGRVVDALGMPIDE 116

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   D       + P  M R+ V++   TGI++ID   P+  GQR  +      GK+
Sbjct: 117 AGELVVAD-QYPAERRAPTVMMRRSVDQPLFTGIKIIDSMIPIGKGQRELIIGDRQTGKT 175

Query: 176 TL--LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
            +   ++  +     K +   +G++   V + +E    +  +  +VVV + +D+S  ++ 
Sbjct: 176 AIGINTIINQKGQNVKCVYVAIGQKASTVAQVVETLRQNGAMDYTVVVNSPADDSAAMQY 235

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           MAP T   IAEY+  +G++VL+I D +++ A + R I+           YP  VF    R
Sbjct: 236 MAPYTGCAIAEYWMDQGEDVLVIYDDLSKHAVAYRTISLLLKRPSGREAYPGDVFYLHSR 295

Query: 293 LLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +  G+  ITA+  +     + +  I  +V SI DG + L+ +    GR P 
Sbjct: 296 LLERAAQLNERYGDGSITALPIIETQLGDISSYITTNVISITDGQLFLDSNAFNSGRRPA 355

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A +   K + +SL   +  + E   +     Y   VD    + +   
Sbjct: 356 VDSGLSVSRVGSSAQTQAMKHVSASLKLELATYYE---LLSFAQYSSDVDEETQRIIDHG 412

Query: 411 PIIYDFLKQSPSDLSSEDV 429
             + + LKQ  +   S D+
Sbjct: 413 ARLTELLKQGATTYLSHDL 431


>gi|149384493|gb|ABR25069.1| ATP synthase beta chain [Arachniodes denticulata]
          Length = 426

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 154/308 (50%), Gaps = 22/308 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG    S+      P PA  +   +   F+TGI+V+D+  P   
Sbjct: 40  GRISNVLGEPVD---NLGPVQSSVIFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+          
Sbjct: 97  GGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 156

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA T+AEYF      +VL   D+I RF  +  E
Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLSSTDNIFRFVQAGSE 216

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 217 VSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 274

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEET 386
            + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E 
Sbjct: 275 SAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKEL 333

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 334 QDIIAILG 341


>gi|46360712|gb|AAS89137.1| ATP synthase beta subunit [Lobatiriccardia lobata]
          Length = 266

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 15/267 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+ +D    +  G  +  I    P           F+TGI+V+D+  P   G 
Sbjct: 3   GRIFNVLGETVDNLGPVNAGT-TFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPYRRGG 61

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GDN 213
           +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N
Sbjct: 62  KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQN 121

Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270
           + +S V  V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++
Sbjct: 122 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 181

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +
Sbjct: 182 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 239

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASV 357
             D   VL+R LA +G YP VDPL S 
Sbjct: 240 HSDATTVLSRGLAAKGIYPAVDPLDST 266


>gi|169260994|gb|ACA52097.1| ATP synthase beta subunit [Lonchitis hirsuta]
          Length = 290

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  + S    + +  PA  +   +    +TGI+V+D+  P  
Sbjct: 7   LGRIFNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSISETGIKVVDLLAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV- 218
            G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  + Y+     K + 
Sbjct: 64  RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 123

Query: 219 ----------VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                     +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 124 EQKISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             + LD   VL R LA +G YP VDPL S S +  + W   E+
Sbjct: 242 TFAHLDATTVLPRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283


>gi|295311717|ref|YP_003587453.1| ATP synthase CF1 subunit alpha [Oncidium Gower Ramsey]
 gi|254833094|gb|ACT83097.1| ATP synthase CF1 subunit alpha [Oncidium Gower Ramsey]
          Length = 507

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 173/378 (45%), Gaps = 11/378 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIKEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISSSE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKM 233
           + +    +     VI   V  G++   V + +  +  G  ++ ++VV  T+D    L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQEGGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  +  +I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++       + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LEAFAQFSSDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPSD-LSSED 428
            + + LKQS SD L+ ED
Sbjct: 416 RLRELLKQSQSDPLAVED 433


>gi|226324165|ref|ZP_03799683.1| hypothetical protein COPCOM_01944 [Coprococcus comes ATCC 27758]
 gi|225207714|gb|EEG90068.1| hypothetical protein COPCOM_01944 [Coprococcus comes ATCC 27758]
          Length = 503

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 181/402 (45%), Gaps = 31/402 (7%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPID 114
           S+  G V+ +  D V    +G  + I+ GD V   GR    P   C  GRV+NALG+PID
Sbjct: 57  SEVYGMVLNLEEDNVGAVLLGDHKNINEGDTVKTTGRVVEVPVGDCMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +     +I    P  ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QATRHRQIERVAPGVISRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPIL 230
           + +   ++  +     K I   +G++   V   ++  +  G  +  + VVV+T+ E   L
Sbjct: 176 TAIAIDTIINQKGQGVKCIYVAIGQKASTVASLVKTLETFG-AMDYTTVVVSTASELAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   + E +   GD+VL++ D +++ A + R ++      P    YP  VF   
Sbjct: 235 QYIAPYSGCAMGEEWMENGDDVLIVYDDLSKHATAYRTLSLLLKRPPGREAYPGDVFYLH 294

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +     + +  I  +V SI DG I L   +   G  
Sbjct: 295 SRLLERAARLSDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-------------RLIGGY 395
           P V+   SVSR+   A     KK+  ++   + ++ E                 RL  G 
Sbjct: 355 PAVNAGLSVSRVGGSAQIKAMKKIAGTIRIDLAQYRELASFAQFGSELDAETSERLAQGV 414

Query: 396 RPGVDLILDK-------AVHQVPIIYDFLKQSPSDLSSEDVF 430
           R  +  IL +         +Q+ IIY  +K+   D++ ED+ 
Sbjct: 415 R--IKEILKQPQYQPMPVEYQIIIIYAAVKKLLLDIAVEDIL 454


>gi|25808487|gb|AAN74370.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 159/329 (48%), Gaps = 26/329 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK T +++ A  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGK-TAVAIDAII 130

Query: 185 DCFDKVIISL---VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           +   + +I +   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + 
Sbjct: 131 NQKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSG 188

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER  
Sbjct: 189 VAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAA 248

Query: 299 P--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   S
Sbjct: 249 KLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLS 308

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VSR+   A     K++  +L   + ++ E
Sbjct: 309 VSRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|11558460|emb|CAC17783.1| ATP synthase subunit B [Icacina mannii]
 gi|14718083|gb|AAK72782.1| ATP synthase beta subunit [Icacina mannii]
          Length = 280

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 138/266 (51%), Gaps = 19/266 (7%)

Query: 109 LGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG P+D   +LG  D   +  I    P  +        F+TGI+V+D+  P   G +IG+
Sbjct: 3   LGXPVD---NLGPVDXRTTSPIHRSAPAFIQLDTXLSIFETGIKVVDLLAPYRRGGKIGL 59

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLKKS 217
           F G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S
Sbjct: 60  FGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAES 119

Query: 218 VV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274
            V  V    +E P  R    LTA+T+AEYF    + +VLL +D+I RF  +  E++   G
Sbjct: 120 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLG 179

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+  L ERI  +  ++G+IT++ ++ V  D+  DP   ++ + LD 
Sbjct: 180 RMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAIYVPADDLTDPAPATIFAHLDA 237

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRL 360
             VL+R LA +G YP VDPL S S +
Sbjct: 238 TTVLSRGLAAKGIYPAVDPLDSTSTM 263


>gi|157285043|gb|ABV31261.1| ATPase [Vibrio furnissii]
 gi|157285045|gb|ABV31262.1| ATPase [Vibrio furnissii]
 gi|157285047|gb|ABV31263.1| ATPase [Vibrio furnissii]
 gi|157285111|gb|ABV31295.1| ATPase [Vibrio furnissii]
          Length = 441

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 30/325 (9%)

Query: 84  GDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNR 138
           G+ V   GR    P      GRV+N LG+PIDG     KG +  ++ S V    P  ++R
Sbjct: 49  GEKVTGTGRILEVPVGPELLGRVVNTLGEPIDG-----KGPIEAKLTSPVEVIAPGVIDR 103

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVG 196
           Q V++  +TG + +D   P+  GQR  V      GK+ +   ++  + D     I   +G
Sbjct: 104 QSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIG 163

Query: 197 ERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           ++   +   +   E++    LK ++VVVA++ ES  L+ +AP     + EYF  +G++ L
Sbjct: 164 QKASTIANVVRKLEEH--GALKNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDAL 221

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPS 300
           ++ D +++ A + R+I+      P    +P  VF    RLLER              G  
Sbjct: 222 IVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGEV 281

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           + + G++TA+  +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+
Sbjct: 282 KGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRV 341

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEE 385
              A +   KKL   +   +  + E
Sbjct: 342 GGSAQTKIIKKLSGGIRTALAAYRE 366


>gi|194333725|ref|YP_002015585.1| F0F1 ATP synthase subunit alpha [Prosthecochloris aestuarii DSM
           271]
 gi|194311543|gb|ACF45938.1| alternate F1F0 ATPase, F1 subunit alpha [Prosthecochloris aestuarii
           DSM 271]
          Length = 508

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 180/384 (46%), Gaps = 21/384 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           V+ GYI+++++    V  L   V   + +   G    NL G    I++D + +  +G   
Sbjct: 30  VEAGYITTVSNGIARVEGLPG-VGFEELLRFPG----NLYGIAFNIDIDDIGVVLLGDYS 84

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAM 136
            ++ GD V   GR    P      GRVI+ LG  +DG    G  D    + I    PP M
Sbjct: 85  CLNAGDRVERTGRVMDVPVGERLIGRVIDPLGNSLDGK---GPPDCHKRLPIERPAPPIM 141

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
           +R  V    +TGI V+D   P+  GQR  +      GK T +++ A  +  DK ++ +  
Sbjct: 142 DRAPVRVPLQTGIMVVDALVPVGRGQRELILGDRQTGK-TAVAISAILNQHDKDVLCIYC 200

Query: 195 -VGERGREVREFIEDYLGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + + +          +VV T    P  ++ ++P  A +I EYF  +G +V
Sbjct: 201 AIGQKASGVAKVVAELRRRGAMDYTIVVVTEGNDPSGMQYISPYAATSIGEYFMEQGRDV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER---IGPSEKEKGNITA 309
           L++ D +T  A + RE++      P    YP  +F    RLLER   +GP +   G++TA
Sbjct: 261 LIVYDDLTNHARAYRELSLLLKRPPGREAYPGDIFYIHSRLLERATHLGP-DLGGGSMTA 319

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +  +  N +  I  ++ SI DG I L+  L E G  P +D   SVSR+  KA  +  
Sbjct: 320 LPVIETEAQNISAYIPTNLISITDGQIFLSPRLFELGILPAIDIGKSVSRVGGKAQLSAY 379

Query: 370 KKLVSSLTHLIHRFEETRDIRLIG 393
           +++  +L     +FEE  +    G
Sbjct: 380 REVTGALKLGFSQFEELENFARFG 403


>gi|313884731|ref|ZP_07818487.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620099|gb|EFR31532.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 505

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 156/325 (48%), Gaps = 7/325 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD 116
           ++G V  + +D V +   G   +I+ GDLV    +    P      GRV+N LG+PIDG+
Sbjct: 57  SIGMVQNLEIDEVGVIVFGDYHDINEGDLVRRLNKVMEVPVGDNLLGRVVNPLGQPIDGE 116

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + + + +  + ++ P  M+RQ V++  +TG + ID   P+  GQR  +      GK+T
Sbjct: 117 GPI-ETEKTRPVEAEAPSIMDRQSVKRPLQTGTKAIDALVPIGRGQRELIVGDRKTGKTT 175

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           +   ++  + +     I   +G++   V+  +      D L  ++++ A++ +   L  +
Sbjct: 176 IAIDAIINQKEQDVLCIYVAIGQKESTVKNIVNTLRKYDALDYTIIMSASASQPSSLLYL 235

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP  A  +AE F   G +VL+I D +T+ A + RE++      P    YP  VF    RL
Sbjct: 236 APYAATAMAEEFMYAGKHVLIIYDDLTKQAAAYREMSLLLKRPPGREAYPGDVFYLHSRL 295

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G+IT++  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 296 LERSAKLNDELGGGSITSLPIIETQAGDISAYIPTNVISITDGQIFLENDLFNSGVRPAI 355

Query: 352 DPLASVSRLADKAWSADEKKLVSSL 376
           +   SVSR+   A     K++  +L
Sbjct: 356 NAGLSVSRVGGAAQVKAMKQVSGTL 380


>gi|126653443|ref|ZP_01725539.1| F0F1 ATP synthase subunit alpha [Bacillus sp. B14905]
 gi|126589799|gb|EAZ83932.1| F0F1 ATP synthase subunit alpha [Bacillus sp. B14905]
          Length = 502

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 154/334 (46%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ IV + P     +I  GD V   GR    P      GRV+N LG+P+DG   +     
Sbjct: 70  NVGIVILGPY---TDIKEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVDGQGPINTTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFAR 183
           S  I S     M R+ V +  +TGI+ ID   P+  GQR  +     +GK+++ +     
Sbjct: 126 SRPIESPAFGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQVGKTSVAIDTILN 185

Query: 184 SDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
            D  + + I + +G++   VR  +E +     L  ++VV A + +   L  +AP   V++
Sbjct: 186 QDGENMICIYVAIGQKESTVRGVVETFRKHGALDYTIVVTAAASQPAPLLFLAPFAGVSM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 AEEFMLQGKHVLIVYDDLSKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 K--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 ETYQNGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFNSGVRPAINAGLSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  F E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLAAFRELESFAQFG 399


>gi|323140891|ref|ZP_08075804.1| ATP synthase F1, alpha subunit [Phascolarctobacterium sp. YIT
           12067]
 gi|322414629|gb|EFY05435.1| ATP synthase F1, alpha subunit [Phascolarctobacterium sp. YIT
           12067]
          Length = 607

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 7/332 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G V+ +N D V I  +G   +I  GD+V   GR    P      GRV++A+G PIDG   
Sbjct: 163 GMVLNLNPDSVGIVLMGGETKIKEGDVVRRTGRIMEVPVGENLLGRVVSAIGDPIDGKGE 222

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    + S      +R+ V+   +TGI+ ID   P+  GQR  +    G GK+ + 
Sbjct: 223 IAAAE-RRPVESPAHGIADRKSVDTPLQTGIKCIDALVPIGRGQRELIIGDRGTGKTAVA 281

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
             ++  +       I   +G++   +   +        ++ +++V AT+ +S  L+ +AP
Sbjct: 282 IDTIINQKGLGVICIYVAIGQKASNIARIVRTLEQHGAMEYTIIVAATAADSAPLQYLAP 341

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              VT+AEYF  +G +VL + D +++ A + R ++      P    YP  VF    RLLE
Sbjct: 342 YAGVTMAEYFMDQGKDVLCVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLE 401

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E + G+ITA+  +     +    I  +V SI DG I L   L   G  P ++ 
Sbjct: 402 RAAKLNDELKGGSITALPIIETLAGDVGGFIPTNVISITDGQIFLESELFYSGIRPAINS 461

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+   A     K++  +L   + +F E
Sbjct: 462 GLSVSRVGGAAQIKAMKQVAGTLRLDLAQFRE 493


>gi|218188940|gb|EEC71367.1| hypothetical protein OsI_03471 [Oryza sativa Indica Group]
          Length = 488

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 143/283 (50%), Gaps = 23/283 (8%)

Query: 103 GRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV N  GKPID G   L +  L +   S + P+  R   E+  +TGI  ID+   +  G
Sbjct: 103 GRVFNGSGKPIDNGPPILPEAYLDIS-GSSINPS-ERTYPEEMIQTGISTIDVMNSIARG 160

Query: 162 QRIGVFAGSGIGKSTLLSMFARS----DCFDK--------------VIISLVGERGREVR 203
           Q+I +F+ +G+  + + +   R      C +K              ++ + +G      +
Sbjct: 161 QKIPLFSAAGLPHNEIAAQICRQAGLVKCLEKSDNILESSEDENFAIVFAAMGVNMETAQ 220

Query: 204 EFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261
            F  D+  + ++++  + +  +++  I R + P  A+T AEY + + G +VL+IL  ++ 
Sbjct: 221 FFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSS 280

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + +  D+  
Sbjct: 281 YADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDIT 340

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            P  D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 341 HPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 383


>gi|161511827|emb|CAP16924.1| ATP synthase alpha subunit [Pediococcus inopinatus]
          Length = 342

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 145/314 (46%), Gaps = 11/314 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 28  GMVQNLESNDVGIVILGGYDDIREGDTVKRTGRIMEVPVGDALVGRVVNTLGQPIDGKGE 87

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 88  I-KTDHTRPVERKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 146

Query: 179 --SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D     I   +G++   VR   + +E Y    +  ++V+ A   E   +  +
Sbjct: 147 IDTILNQKDQNIICIYVAIGQKESTVRTQVDTLEKY--GAMDYTIVLSAGPSEPAPMLYL 204

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RL
Sbjct: 205 APYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRL 264

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  V     +    I  +V SI DG I L+  L   G  P +
Sbjct: 265 LERAAKLNDELGAGSMTALPFVETKAGDIAAYIPTNVISITDGQIFLDSDLFYSGTRPAI 324

Query: 352 DPLASVSRLADKAW 365
           D  +SVSR+   A 
Sbjct: 325 DAGSSVSRVGGDAQ 338


>gi|157826259|ref|YP_001493979.1| F0F1 ATP synthase subunit alpha [Rickettsia akari str. Hartford]
 gi|166201673|sp|A8GPZ6|ATPA_RICAH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157800217|gb|ABV75471.1| F0F1 ATP synthase subunit alpha [Rickettsia akari str. Hartford]
          Length = 512

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 25/353 (7%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   
Sbjct: 61  GLVLNLENDSVSAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDG--- 117

Query: 119 LGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KGD++ +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 --KGDIASKEYRHIAMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--------SMFARSDCFDKV--IISLVGERGREVREFIEDYLGDN--LKKSVVVVA 222
           + +            + ++  DK+  I   +G++   V + ++  L D   +  ++VV A
Sbjct: 176 TAIAVDTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKK-LEDAGAMDYTIVVSA 234

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ E+  L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    Y
Sbjct: 235 TASEAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAY 294

Query: 283 PTSVFSELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     +EKGN  +TA+  +     + +  I  +V SI DG I L  
Sbjct: 295 PGDVFYLHSRLLERAAKMSEEKGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            L  +G  P V+   SVSR+   A     K++  S+   + +F E       G
Sbjct: 355 ELFYKGVRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELESFSQFG 407


>gi|299136420|ref|ZP_07029603.1| ATP synthase F1, alpha subunit [Acidobacterium sp. MP5ACTX8]
 gi|298600935|gb|EFI57090.1| ATP synthase F1, alpha subunit [Acidobacterium sp. MP5ACTX8]
          Length = 515

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 169/369 (45%), Gaps = 14/369 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G  + ++ D V    +G   E+  GD V   G+    P      GRV+NALG+PID   
Sbjct: 61  MGLAMNLDEDQVGTVVLGDYSELKEGDEVKRTGKIMSVPVGEALIGRVVNALGQPIDDKG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +     ++ +    P  + RQ V +   TGI+ ID   P+  GQR  +      GK+++
Sbjct: 121 PINTPH-TLPVERLAPGVIARQSVTEPMATGIKAIDTMIPIGRGQRELLIGDRQTGKTSV 179

Query: 178 -LSMFARSDCFDKV-IISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESPILRK 232
            L     S   D + I   +G++   V    + +E+Y    +  ++VV AT+ E   ++ 
Sbjct: 180 ALDTIINSAKNDLICIYCAIGQKRSSVAAVVQTLEEY--GAMAYTIVVAATASEPAPMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A  + EYF   G + L+I D +++ A S REI+      P    YP  VF    R
Sbjct: 238 LAPFAATAMGEYFRDNGKHALIIYDDLSKHAASYREISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     KE   G++TA+  +     + +  I  +V SI DG I     L   G  P 
Sbjct: 298 LLERSSKMSKELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFFETDLFNSGVRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++ S+L   + ++   R++     +   +D +    +++ 
Sbjct: 358 VNVGLSVSRVGFAAAIKATKQVGSTLKLDLAQY---RELAAFAQFGSDLDKVTQNQLNRG 414

Query: 411 PIIYDFLKQ 419
             + + LKQ
Sbjct: 415 ARLTELLKQ 423


>gi|149384589|gb|ABR25117.1| ATP synthase beta chain [Megalastrum biseriale]
          Length = 426

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSVTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLPGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|152972643|ref|YP_001337789.1| F0F1 ATP synthase subunit alpha [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238897241|ref|YP_002921989.1| F0F1 ATP synthase subunit alpha [Klebsiella pneumoniae NTUH-K2044]
 gi|262040361|ref|ZP_06013607.1| F-ATPase subunit alpha [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330005179|ref|ZP_08305141.1| ATP synthase F1, alpha subunit [Klebsiella sp. MS 92-3]
 gi|166201669|sp|A6TG38|ATPA_KLEP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|150957492|gb|ABR79522.1| ATP synthase subunit A [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238549571|dbj|BAH65922.1| ATP synthase subunit A [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042302|gb|EEW43327.1| F-ATPase subunit alpha [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328536385|gb|EGF62744.1| ATP synthase F1, alpha subunit [Klebsiella sp. MS 92-3]
          Length = 513

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG PIDG   L     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGAPIDGKGPLENDGFSA-VEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  +      GK+ L   ++  + D   K +   +G++   +   +   E++    L  +
Sbjct: 164 RELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P
Sbjct: 222 IVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  + + G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|293393687|ref|ZP_06637996.1| ATP synthase F1 sector alpha subunit [Serratia odorifera DSM 4582]
 gi|291423809|gb|EFE97029.1| ATP synthase F1 sector alpha subunit [Serratia odorifera DSM 4582]
          Length = 513

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 145/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG PIDG     KG +  +  S V    P  + RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGAPIDG-----KGPVEHDGFSPVETIAPGVIERQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K +   +G++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVAT+ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+   
Sbjct: 218 LANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    YP  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAYPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|227874108|ref|ZP_03992314.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227840020|gb|EEJ50444.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 673

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 37/339 (10%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            + GRV++ALG PIDG+ ++   +    I    P  ++R+ V    +TGI  ID   P+ 
Sbjct: 270 AYLGRVVDALGAPIDGEGAINTKEYR-PIEEPAPGIIDRKSVNVPLQTGILAIDSMFPIG 328

Query: 160 HGQRIGVFAGSGIGKS-----TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            GQR  +      GK+     T+L+   + DC    I   +G++   +   +E     NL
Sbjct: 329 RGQRELIIGDRQTGKTSIAIDTILNQKGK-DCI--CIYVAIGQKESTIASLVE-----NL 380

Query: 215 KK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
           KK      + VV AT+ +   ++ +AP  A ++AEYF  +G +VL++ D +++ A + R 
Sbjct: 381 KKNEAMSYTCVVAATAADPAPIQYIAPYAATSLAEYFMYQGRDVLIVYDDLSKHAVAYRA 440

Query: 269 IATNSGELPVARGYPTSVFSELPRLLER-------IGPSEKEKGNITAV-ISVLVDGDNH 320
           ++   G  P    YP  VF    RLLER       +G      G+ITA+ I   +DGD  
Sbjct: 441 LSLLLGRAPGREAYPGDVFYLHSRLLERSCRLSDALG-----GGSITALPIIETLDGDV- 494

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V SI DG I L  +L  EG+ P V+   SVSR+   A +   KK   SL   +
Sbjct: 495 SAYIPTNVISITDGQIFLESNLFFEGQRPAVNVGLSVSRVGGAAQTKAMKKAAGSLRIDL 554

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            ++   R++ +   +   +D      + Q  I+ + LKQ
Sbjct: 555 AQY---REMAVFTQFSSDLDESTKTQLEQGAILMELLKQ 590


>gi|50423337|ref|XP_460251.1| DEHA2E21846p [Debaryomyces hansenii CBS767]
 gi|49655919|emb|CAG88527.1| DEHA2E21846p [Debaryomyces hansenii]
          Length = 511

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 157/323 (48%), Gaps = 19/323 (5%)

Query: 60  GQVIRI--NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +  +  IV +     G ++    + F     +I+ S    GR+ +  G+PID   
Sbjct: 64  GQVLEVKGSKAIVQVFEGTSGIDVKKTRVEFTGQNLKIAVSEDMLGRIFDGSGRPIDKGP 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I         R   E+   TGI  ID    +  GQ+I +F+ SG+  + +
Sbjct: 124 KIFAEDY-LDINGSPINPYARIYPEEMISTGISAIDTMNSIARGQKIPIFSASGLPHNEI 182

Query: 178 LSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222
            +   R         D  D       ++ + +G      R F +D+  + +L+++ + + 
Sbjct: 183 AAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEENGSLERTSLFLN 242

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281
            +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P  RG
Sbjct: 243 LANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVPGRRG 302

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++++L  + ER G  E   G+IT V  + +  D+   PI D    I +G I ++R 
Sbjct: 303 YPGYMYTDLSTIYERAGRVEGRNGSITQVPILTMPNDDITHPIPDLTGYITEGQISVDRQ 362

Query: 342 LAEEGRYPPVDPLASVSRLADKA 364
           L  +G YPP++ L S+SRL   A
Sbjct: 363 LDNKGIYPPINVLPSLSRLMKSA 385


>gi|260771029|ref|ZP_05879957.1| ATP synthase alpha chain [Vibrio furnissii CIP 102972]
 gi|260613918|gb|EEX39109.1| ATP synthase alpha chain [Vibrio furnissii CIP 102972]
 gi|315178659|gb|ADT85573.1| F0F1 ATP synthase subunit alpha [Vibrio furnissii NCTC 11218]
          Length = 466

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 29/306 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTP 157
            GRV+N LG+PIDG     KG +  ++ S V    P  ++RQ V++  +TG + +D   P
Sbjct: 57  LGRVVNTLGEPIDG-----KGPIEAKLTSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIP 111

Query: 158 LCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGD 212
           +  GQR  V      GK+ +   ++  + D     I   +G++   +   +   E++   
Sbjct: 112 IGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRKLEEH--G 169

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            LK ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+  
Sbjct: 170 ALKNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL 229

Query: 273 SGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDN 319
               P    +P  VF    RLLER              G  + + G++TA+  +     +
Sbjct: 230 LRRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGEVKGKTGSLTALPIIETQAGD 289

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 290 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 349

Query: 380 IHRFEE 385
           +  + E
Sbjct: 350 LAAYRE 355


>gi|77165548|ref|YP_344073.1| V-type ATP synthase subunit A [Nitrosococcus oceani ATCC 19707]
 gi|254433578|ref|ZP_05047086.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Nitrosococcus oceani AFC27]
 gi|123771743|sp|Q3J9F3|VATA_NITOC RecName: Full=V-type ATP synthase alpha chain; AltName:
           Full=V-ATPase subunit A
 gi|76883862|gb|ABA58543.1| Sodium-transporting two-sector ATPase [Nitrosococcus oceani ATCC
           19707]
 gi|207089911|gb|EDZ67182.1| ATP synthase alpha/beta family, nucleotide-binding domain protein
           [Nitrosococcus oceani AFC27]
          Length = 591

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 25/282 (8%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P   R+       TG R++D F PL  G +  V    G GK+ +    AR    D VI  
Sbjct: 198 PYQQREHGVSPLMTGQRILDTFFPLLKGGKAAVPGPFGAGKTMVQQQIARWSNADIVIYV 257

Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245
             GERG E+ E ++ +        G +L +  ++VA +   P++ + A L   VT+ EY+
Sbjct: 258 GCGERGNELVEVLDSFPELTDPHTGRSLMERTLLVANTSNMPVVAREASLYVGVTLGEYY 317

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302
             +G +V+++ DS +R+A ++RE+A   G++PV  GYP  + S L    ER G  +    
Sbjct: 318 RDQGYDVVIVADSTSRWAEALREVAGRLGQMPVEEGYPAYLASRLAAFYERAGRVQTLGG 377

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD---------P 353
             G++T + +V   G + ++P+    + I+     L++ LA+   YP V          P
Sbjct: 378 SVGSVTLIGAVSPPGGDFSEPVTSHTKEIVRTFWALSKDLADARHYPAVSWRESFSDDIP 437

Query: 354 LAS--VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +A+   +   DK W A   +   ++T L    E +R + L+G
Sbjct: 438 VAARWWAEHIDKHWQAGRAE---AMTLLTQAEELSRIVNLVG 476


>gi|242310680|ref|ZP_04809835.1| ATP synthase subunit alpha [Helicobacter pullorum MIT 98-5489]
 gi|239523078|gb|EEQ62944.1| ATP synthase subunit alpha [Helicobacter pullorum MIT 98-5489]
          Length = 504

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 14/360 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G G+EI  G  V   G+  R+       GRV+NALG+PIDG  ++   +    +
Sbjct: 73  VGVVVLGAGKEIKEGTSVKRLGKLLRVPVGDDLMGRVVNALGEPIDGKGAIEAKEYRF-M 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
             K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ +         
Sbjct: 132 EEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTIINQKGQ 191

Query: 188 DKVIISL-VGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D V I + +G++   V + +   E++    ++ +++V A + +S  ++ +AP   VT+ E
Sbjct: 192 DVVCIYVAIGQKESTVAQVVRKLEEH--GAMEYTIIVNAPASDSAAMQYLAPYAGVTMGE 249

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF   G + L++ D +++ A + RE++      P    +P  VF    RLLER      E
Sbjct: 250 YFRDNGRHALIVYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSRLLERAAKVSDE 309

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+  +     +    I  +V SI DG I L   L   G  P ++   SVSR+ 
Sbjct: 310 LGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPAINVGLSVSRVG 369

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++  +L   + ++   R+++    +   +D    K + +   + + LKQ P
Sbjct: 370 GAAQIKATKQVSGTLRLDLAQY---RELQAFAQFASDLDETSRKQLDRGQRMVEVLKQPP 426


>gi|156739746|gb|ABU93526.1| ATP synthase beta subunit [Dryopteris cycadina]
          Length = 394

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 162/339 (47%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVRSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD      R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTAPPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 328 KELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 362


>gi|33413311|emb|CAD67936.1| putative A-ATPase A-subunit [Thermotoga sp. RQ2]
          Length = 592

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 11/227 (4%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RVIDIF P+  G    +  G G GK+      A+    D V+    GERG E+ E +
Sbjct: 210 TGQRVIDIFFPISKGGTAAIPGGFGTGKTITQHQLAKWADADVVVYIGCGERGNEMTEVL 269

Query: 207 EDY-------LGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           E++        G  L    V++A +   P+  R+ +  T +TIAEYF   G +V L+ DS
Sbjct: 270 EEFPHLQDPRTGKPLMDRTVLIANTSNMPVSAREASIYTGITIAEYFRDMGYHVALMADS 329

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK---EKGNITAVISVLV 315
            +R+A ++RE++    E+PV  GYP  + S + +  ER G  E      G++T + +V  
Sbjct: 330 TSRWAEALRELSGRLEEMPVEEGYPAYLASRIAQFYERAGLCENLNGTTGSVTIIGAVSP 389

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            G + ++P+    +  +     L+R+LA    YP ++ + S S  A+
Sbjct: 390 PGGDFSEPVTQHTKRFVRCFWALDRNLAYSRHYPSINWITSYSEYAE 436


>gi|117922563|ref|YP_871755.1| F0F1 ATP synthase subunit alpha [Shewanella sp. ANA-3]
 gi|158512327|sp|A0L2T0|ATPA_SHESA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|117614895|gb|ABK50349.1| ATP synthase F1, alpha subunit [Shewanella sp. ANA-3]
          Length = 513

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  ++     S +E+++  P  + R+ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGAIDNDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ +   ++  + D   K +   VG++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ E+  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASEAAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G    + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERASRVNEEYVEKFTKGAVTGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|257454336|ref|ZP_05619599.1| ATP synthase F1, alpha subunit [Enhydrobacter aerosaccus SK60]
 gi|257448239|gb|EEV23219.1| ATP synthase F1, alpha subunit [Enhydrobacter aerosaccus SK60]
          Length = 514

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 163/349 (46%), Gaps = 34/349 (9%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE ++L  G   +  GR    P      GRV++ALG PIDG    
Sbjct: 63  MALNLEQDSVGAVVLGEYLNLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG---- 118

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG ++ ++  KV    P  ++RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 -KGPINAKLTDKVEKIAPGVIDRQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGER----GREVREFIEDYLGDNLKKSVVVVATSDESPI 229
            +   ++ A+     K +   VG++       VR+  E      L  + VVVA++ E   
Sbjct: 178 AMAIDAIIAQKHSGIKCVYVAVGQKRSTIANVVRKLEET---GALAYTTVVVASASEPAA 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF  
Sbjct: 235 LQYIAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYL 294

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G    + G++TA+  +     + +  +  +V SI DG I
Sbjct: 295 HSRLLERASRVNAEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 354

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L  SL   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 355 FLESSLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 403


>gi|227903656|ref|ZP_04021461.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus ATCC
           4796]
 gi|227868543|gb|EEJ75964.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus ATCC
           4796]
          Length = 506

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 162/359 (45%), Gaps = 28/359 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G F + Q   S+++G +I           +G  + I  GD V   GR    P      GR
Sbjct: 61  GSFGIAQNLESNDVGIII-----------LGQFDNIREGDRVQRTGRIMEVPVGDALIGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I +K P  M+RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 110 VVNPLGQPVDGLGEI-KSDKTRPIEAKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRE 168

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------ 216
            +      GK++L +         D + I + +G++   VR  +E      LK+      
Sbjct: 169 LIIGDRKTGKTSLAIDTILNQKGQDVICIYVAIGQKESTVRTQVE-----TLKRFGAMDY 223

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 224 TIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRP 283

Query: 277 PVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG
Sbjct: 284 PGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDG 343

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E       G
Sbjct: 344 QIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG 402


>gi|238809782|dbj|BAH69572.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 528

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 155/333 (46%), Gaps = 9/333 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V+ +  ++V +   G    +S GD     G    I       GRV+NALG+PIDG   
Sbjct: 61  GLVLNLEEEVVGVTIFGNANSLSEGDTCKRSGEVISIPVGDKLLGRVVNALGQPIDGKGK 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +    +  EI    P  M RQ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 INT-TVKKEIFKVAPGVMTRQEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
             ++  +       I   +G++   V + ++  L D   ++ + VVV+ + E    + +A
Sbjct: 180 IDTIINQKGKNVNCIYVAIGQKNSTVAQIVKK-LEDTGAMEYTTVVVSGASELAPQQYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P + VTIAE + +KG + L++ D +++ A + R ++      P    YP  VF    +LL
Sbjct: 239 PYSGVTIAEEWMTKGKDCLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSQLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     KE   G+ITA+  +     + +  I  +V SI DG I    +L   G+ P VD
Sbjct: 299 ERAARVTKEYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQRPAVD 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A     KK+  SL   + ++ E
Sbjct: 359 VGFSVSRVGSAAQIKAMKKVAGSLKLELAQYNE 391


>gi|189426221|ref|YP_001953398.1| F0F1 ATP synthase subunit alpha [Geobacter lovleyi SZ]
 gi|226739890|sp|B3EA03|ATPA_GEOLS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189422480|gb|ACD96878.1| ATP synthase F1, alpha subunit [Geobacter lovleyi SZ]
          Length = 502

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 154/332 (46%), Gaps = 7/332 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V+ +  D V    +G   EI  GD V   GR    P      GRV+NA+G+PIDG   
Sbjct: 61  GMVLNLEEDNVGAAILGEFAEIKEGDTVKRTGRITEVPVGDALVGRVVNAIGQPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           +     S ++  K P  + R+ V +   TG++ ID   P+  GQR  +      GK+ + 
Sbjct: 121 INSSTFS-KVEIKAPGIVARKSVHQPMATGLKAIDSMVPIGRGQRELIIGDRQTGKTAVA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
           +         D + I + +G++   V + +        +  ++VV AT+ ES  L+ +AP
Sbjct: 180 VDTIINQKGGDVICIYVAIGQKRSTVAQVVSKLTEHGAMDYTIVVAATASESAPLQFIAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T VT+ EYF     + L+I D +++ A + R+++      P    YP  VF    RLLE
Sbjct: 240 YTGVTMGEYFRDNKKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 300 RACKLSDECGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFFSGVRPAINV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+   A +   K++  +L   + ++ E
Sbjct: 360 GLSVSRVGGSAQTKSMKQVAGTLRLNLAQYRE 391


>gi|6688490|emb|CAB65147.1| ATP synthase beta subunit [Lamium amplexicaule]
          Length = 274

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 124/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+    G   RE
Sbjct: 29  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFXGVGERTRE 88

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 89  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 148

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 206

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 254


>gi|156739798|gb|ABU93552.1| ATP synthase beta subunit [Dryopsis mariformis]
          Length = 389

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 161/339 (47%), Gaps = 29/339 (8%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 29  TTLGRISNVLGEPVD---NLGPVRSSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 85

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 86  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 145

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +V L +D+I RF  +
Sbjct: 146 INEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVPLFIDNIFRFVQA 205

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E +   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP  
Sbjct: 206 GSEXSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 263

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD     +R LA +G YP VDPL S S ++   W   E+       +   + R+
Sbjct: 264 ATTSAHLDATTAPSRGLAAKGIYPAVDPLDSTSTMS-HPWIVGEEHYDTAQGVKQTLQRY 322

Query: 384 EETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
           +E +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 323 QELQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 357


>gi|161621806|ref|YP_015864.2| F0F1 ATP synthase subunit beta [Mycoplasma mobile 163K]
          Length = 516

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 162/303 (53%), Gaps = 26/303 (8%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLG---KGDLSMEIMSKVPPAMNRQRVEKG---FK 146
           + I  S    GRVI+ +GK +D  DS+     G++   +  +      R  V       +
Sbjct: 105 YAIKISKRLLGRVIDPIGKILD--DSIATPVHGNMYAPLEMQHDSEATRYVVSPKNAILE 162

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE 201
           TGI+VID+  P+  G + G+  G+G+GK+ ++      + F K      + + +GER RE
Sbjct: 163 TGIKVIDVLLPIPKGGKTGLLGGAGVGKTVIVQELI--NAFIKFHDGVSVFAGIGERIRE 220

Query: 202 VREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
             E  ++   LG  L K+  +    +ESP LR  + ++ V +AEYF +  G +VLL +D+
Sbjct: 221 GHELWKEAEALG-FLNKTAFIFGQMNESPGLRFRSGISGVKVAEYFRNNLGKSVLLFMDN 279

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I R+  +  EI++   + P A GY  ++FSE+ +L ERI  ++   G+IT++ ++ +  D
Sbjct: 280 IFRYVQAGSEISSLLEKTPSAVGYQPTLFSEMGQLQERINSTKD--GDITSIQAMYIPAD 337

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-----KKLV 373
           +  DP A +  +  D  I+L+R LA EG YP +DPL S S++    +++ E     KK V
Sbjct: 338 DFTDPAAVAAFAHFDSTIILSRQLAAEGVYPAIDPLESNSKMLSIKYTSREHLDIAKKTV 397

Query: 374 SSL 376
            +L
Sbjct: 398 QTL 400


>gi|149798681|gb|ABR32031.1| ATP synthase beta chain [Didymochlaena truncatula]
          Length = 382

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 24/303 (7%)

Query: 109 LGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P   G +IG+
Sbjct: 2   LGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGL 58

Query: 167 FAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-------- 214
           F G+G+GK+ L+    +  A++     V   +  ER RE  +   +     +        
Sbjct: 59  FGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVINEQNISE 117

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA T+AEY       +VLL +D+I RF  +  E++   
Sbjct: 118 SKVALVYGQMNEPPGARMRVGLTASTMAEYLRDVNKQDVLLFIDNIFRFVQAGSEVSALL 177

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 178 GRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLD 235

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIRL 391
              VL+R LA +G YP VDPL S S +  + W   E+       +     R++E +DI  
Sbjct: 236 ATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQRYKELQDIIA 294

Query: 392 IGG 394
           I G
Sbjct: 295 ILG 297


>gi|82751706|ref|YP_417447.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus RF122]
 gi|124007215|sp|Q2YUJ9|ATPA_STAAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|82657237|emb|CAI81678.1| ATP synthase alpha chain [Staphylococcus aureus RF122]
          Length = 502

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ +V + P  GI E    GD V   GR    P      GRV+N LG+PIDG   +    
Sbjct: 70  NVGVVILGPYAGITE----GDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGSAQIKAMKKVAGTL 382


>gi|149384481|gb|ABR25063.1| ATP synthase beta chain [Histiopteris incisa]
          Length = 426

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG     +M  + +  PA  +   +   F+TGI+V D+  P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVRSSTMFPIHRSAPAFTQLDTKLSIFETGIKVADLLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 94  YRRGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDPYMEMKESKV 153

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA T+AEYF      +VL  +D+I RF  +
Sbjct: 154 INEQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLPFIDNILRFVQA 213

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A G+  ++ +E+    ERI  +  + G+IT++ +V V  D+  DP  
Sbjct: 214 GSEVSALLGRMPSAVGHQPTLGTEMGSSQERI--TSTKDGSITSIQAVYVPADDLTDPAP 271

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383
            +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +    +     R+
Sbjct: 272 ATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTSQRY 330

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 331 KELQDIIAILG 341


>gi|6652831|gb|AAF22496.1|AF098522_6 F1F0-ATPase subunit alpha [Lactobacillus acidophilus]
          Length = 503

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 162/359 (45%), Gaps = 28/359 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G F + Q   S+++G +I           +G  + I  GD V   GR    P      GR
Sbjct: 58  GSFGIAQNLESNDVGIII-----------LGQFDNIREGDRVQRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I +K P  M+RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGLGEI-KSDKTRPIEAKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------ 216
            +      GK++L +         D + I + +G++   VR  +E      LK+      
Sbjct: 166 LIIGDRKTGKTSLAIDTILNQKGQDVICIYVAIGQKESTVRTQVE-----TLKRFGAMDY 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 221 TIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG
Sbjct: 281 PGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDG 340

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E       G
Sbjct: 341 QIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLTAYRELESFAQFG 399


>gi|306773430|emb|CBJ55291.1| putative alpha subunit of ATP synthase [Sphaeropteris polypoda]
          Length = 490

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+  +I  S C+ GRV+NAL +PID
Sbjct: 66  SDNVGAVL-----------MGDGLTIQEGGSVRATGKIAQIPVSDCFVGRVVNALAQPID 114

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK
Sbjct: 115 GKGQIPASEFR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGK 173

Query: 175 STLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILR 231
           + + +    +     VI   V  G++   V + +  +      +  +VV+ +  SP  L+
Sbjct: 174 TAVATDTILNQKGQNVICVYVAIGQKASSVAQVVNTFQDRGAMEYTIVVSETANSPATLQ 233

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 234 YLAPYTGAALAEYFMYRKQHTLIIHDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHS 293

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER   S  +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P
Sbjct: 294 RLLERAAKSSIQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRP 353

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A     K++   L   + +F E
Sbjct: 354 AINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 389


>gi|14718081|gb|AAK72781.1| ATP synthase beta subunit [Hypericum perforatum]
          Length = 277

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 16/229 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGR 200
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    +  A++     V   +  ER R
Sbjct: 32  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTR 90

Query: 201 EVREFIEDYL------GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
           E  +  ++         +N+ +S V  V    +E P  R    LTA+T+AEYF      +
Sbjct: 91  EGNDLYKEMRDSGVINKENIAQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQD 150

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G IT++ 
Sbjct: 151 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQ 208

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 209 AVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 257


>gi|284928721|ref|YP_003421243.1| ATP synthase F1 subcomplex subunit alpha [cyanobacterium UCYN-A]
 gi|284809180|gb|ADB94885.1| ATP synthase F1 subcomplex alpha subunit [cyanobacterium UCYN-A]
          Length = 503

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 159/339 (46%), Gaps = 17/339 (5%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G +I  G  V   G+    P      GRV+++LG+PIDG 
Sbjct: 60  TIGIALNLEEDNVGAVLMGTGLDIQEGSTVKATGKIAQVPVGEAMVGRVVDSLGRPIDG- 118

Query: 117 DSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KGD+       I S  P  + R+ V +  +TGI  ID   P+  GQR  +      
Sbjct: 119 ----KGDIKASEYRLIESTAPGIIARKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRKT 174

Query: 173 GKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESP 228
           GK+ + +         D + + + +G++   V + I   L +   +  ++VV A +++  
Sbjct: 175 GKTAIAIDTIINQKSEDVICVYVAIGQKASTVAQVI-GVLEEKGAMDYTIVVAANANDPA 233

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP T  ++AE+F  KG + L+I D +T+ A + R+++      P    YP  VF 
Sbjct: 234 TLQYLAPYTGASLAEFFMYKGKHTLVIYDDLTKQAQAYRQLSLLLRRPPGREAYPGDVFY 293

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E  +G++TA+  +     + +  I  +V SI DG I L+  L   G
Sbjct: 294 IHSRLLERAAKLSPELGEGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSG 353

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             P ++   SVSR+   A +   K++   L   + +F E
Sbjct: 354 FRPAINAGISVSRVGSAAQTKAMKQVAGKLKLELAQFAE 392


>gi|156739756|gb|ABU93531.1| ATP synthase beta subunit [Dryopteris sparsa]
          Length = 394

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 151/311 (48%), Gaps = 22/311 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P
Sbjct: 34  TTLGRISNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 90

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211
              G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+       
Sbjct: 91  YRRGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKV 150

Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265
               N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +
Sbjct: 151 INEQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQA 210

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP  
Sbjct: 211 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAP 268

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383
            +  + LD   V  R LA +G YP VDPL S S ++ + W   E+       +   + R+
Sbjct: 269 ATTSAHLDATTVPPRGLAAKGIYPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRY 327

Query: 384 EETRDIRLIGG 394
           +E +DI  I G
Sbjct: 328 KELQDIIAILG 338


>gi|160871653|ref|ZP_02061785.1| ATP synthase F1, alpha subunit [Rickettsiella grylli]
 gi|159120452|gb|EDP45790.1| ATP synthase F1, alpha subunit [Rickettsiella grylli]
          Length = 514

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 178/401 (44%), Gaps = 38/401 (9%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           V LG+ +     +S   G  + +  D V    +G  E +S G  V   GR    P     
Sbjct: 48  VMLGEMIEF---SSQCYGLALNLERDSVGAVVLGDYEGLSEGQTVKCTGRILEVPVGEAL 104

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTP 157
            GRV+NALG PIDG     +G +  E  S +    P  + RQ V +  +TGI  ID   P
Sbjct: 105 LGRVVNALGHPIDG-----RGTIETEKKSPIEQIAPGVIWRQSVSQPLQTGILAIDSMVP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211
           +  GQR  +      GK+ L   ++  + D   K I   +G++       VR+  E    
Sbjct: 160 IGRGQRELIIGDRQTGKTALAIDAIINQKDTGVKCIYVAIGQKASSIAAVVRKLEEQ--- 216

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D LK ++++ A + +S  L+ +AP     + EYF  +G++ L+I D +T+ A + R+I+ 
Sbjct: 217 DALKHTIIISANAADSAALQFIAPYAGCAMGEYFRDQGEDALIIYDDLTKQAWAYRQISL 276

Query: 272 NSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGD 318
                P    YP  +F    RLLER              G  + + G++TA+  +     
Sbjct: 277 LLRRPPGREAYPGDIFYLHSRLLERAARVNEAFVEKATNGRVKGKTGSLTALPIIETQAG 336

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  +  +V SI DG I L   L   G  P ++   SVSR+   A +   KKL   +  
Sbjct: 337 DVSAFVPTNVISITDGQIFLETDLFNSGIRPAINAGLSVSRVGSAAQTKIIKKLGGGVRL 396

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + ++   R++     +   +D +  K + +   + + LKQ
Sbjct: 397 SLAQY---RELAAFSQFMSDLDEVTRKQLERGQRVTEILKQ 434


>gi|25808409|gb|AAN74331.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PID    +   + 
Sbjct: 7   EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDSKGEIETNEF 66

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 67  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 125

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ +AP + V
Sbjct: 126 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLAPYSGV 183

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 184 AMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 243

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 244 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 303

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 304 SRVGGAAQIKATKQVSGTLRLDLAQYRE 331


>gi|161511841|emb|CAP16931.1| ATP synthase alpha subunit [Pediococcus inopinatus]
          Length = 338

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 145/314 (46%), Gaps = 11/314 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 24  GMVQNLESNDVGIVILGGYDDIREGDTVKRTGRIMEVPVGDALVGRVVNTLGQPIDGKGE 83

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 84  I-KTDHTRPVERKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 142

Query: 179 --SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D     I   +G++   VR   + +E Y    +  ++V+ A   E   +  +
Sbjct: 143 IDTILNQKDQNIICIYVAIGQKESTVRTQVDTLEKY--GAMDYTIVLSAGPSEPAPMLYL 200

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RL
Sbjct: 201 APYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRL 260

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  V     +    I  +V SI DG I L+  L   G  P +
Sbjct: 261 LERAAKLNDELGAGSMTALPFVETKAGDIAAYIPTNVISITDGQIFLDSDLFYSGTRPAI 320

Query: 352 DPLASVSRLADKAW 365
           D  +SVSR+   A 
Sbjct: 321 DAGSSVSRVGGDAQ 334


>gi|161511839|emb|CAP16930.1| ATP synthase alpha subunit [Pediococcus inopinatus]
          Length = 341

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 145/314 (46%), Gaps = 11/314 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 26  GMVQNLESNDVGIVILGGYDDIREGDTVKRTGRIMEVPVGDALVGRVVNTLGQPIDGKGE 85

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 86  I-KTDHTRPVERKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 144

Query: 179 --SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D     I   +G++   VR   + +E Y    +  ++V+ A   E   +  +
Sbjct: 145 IDTILNQKDQNIICIYVAIGQKESTVRTQVDTLEKY--GAMDYTIVLSAGPSEPAPMLYL 202

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RL
Sbjct: 203 APYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRL 262

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  V     +    I  +V SI DG I L+  L   G  P +
Sbjct: 263 LERAAKLNDELGAGSMTALPFVETKAGDIAAYIPTNVISITDGQIFLDSDLFYSGTRPAI 322

Query: 352 DPLASVSRLADKAW 365
           D  +SVSR+   A 
Sbjct: 323 DAGSSVSRVGGDAQ 336


>gi|161511829|emb|CAP16925.1| ATP synthase alpha subunit [Pediococcus damnosus]
          Length = 337

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 9/313 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 22  GMVQNLESNDVGIVILGNYDDIREGDTVKRTGRIMEVPVGDALIGRVVNTLGQPIDGKGE 81

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 82  I-KTDHTRPVEHKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 140

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKMA 234
             ++  + D     I   +G++   VR  +E  +  G      V+    S+ +P+L  +A
Sbjct: 141 IDTILNQKDQNIICIYVAIGQKESTVRTQVEALEKFGAMDYTIVLSAGPSEPAPMLY-LA 199

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RLL
Sbjct: 200 PYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLL 259

Query: 295 ERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER    S+K   G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D
Sbjct: 260 ERAAKLSDKLGAGSMTALPFVETKAGDISAYIPTNVISITDGQIFLDSDLFYSGTRPAID 319

Query: 353 PLASVSRLADKAW 365
             +SVSR+   A 
Sbjct: 320 AGSSVSRVGGDAQ 332


>gi|25808431|gb|AAN74342.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 24/328 (7%)

Query: 79  EEISLGDLVFHWGR--------------FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           EE S+G +VF +G                ++       GRV+NALG+PIDG   +   + 
Sbjct: 13  EEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGEIETNEF 72

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 73  SL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVAIDAIIN 131

Query: 183 RSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +       I   +G++   V + +   E+Y    ++ SVV+ A++ +S  ++ + P + V
Sbjct: 132 QKGQNVICIYVAIGQKESTVAQVVRKLEEY--GAMEYSVVINASASDSAAMQYLTPYSGV 189

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLER   
Sbjct: 190 AMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLERAAK 249

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 250 LCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINVGLSV 309

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SR+   A     K++  +L   + ++ E
Sbjct: 310 SRVGGAAQIKATKQVSGTLRLDLAQYRE 337


>gi|46447313|ref|YP_008678.1| V-type ATP synthase subunit B [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|81697602|sp|Q6MAJ6|VATB_PARUW RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|46400954|emb|CAF24403.1| putative H+-transporting two-sector ATPase (chain B, atpB)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 438

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 28/370 (7%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           +T  ++ V LG+      K+  N+   V+RI+ D V +        IS  D V    R  
Sbjct: 16  ITITAEGVSLGELARIDLKDGRNIYASVLRIDGDQVTLQVFQTTRGISTSDQVTFLNRQM 75

Query: 94  RISPSACWCGRVINALGKPIDGD-----DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           +        GR ++  G PIDG      +S+  G  S   + ++ P   R  V    +T 
Sbjct: 76  QAVYGDTLLGRRLSGTGLPIDGGPQVIGESIDIGSTSFNPVKRIVP---RDMV----RTN 128

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I +ID+F  L   Q+I +F+  G   + LL   A     D VII  +G   +E + FIE+
Sbjct: 129 IPMIDVFNCLVKSQKIPIFSVPGEPYNALLMRIANQTDADVVIIGGMGLTFKEYQAFIEN 188

Query: 209 Y-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                 + K+V+ +  + +  +   + P  A+  AE F++ G NVL++L  +T FA +I+
Sbjct: 189 AETAGTINKTVMFIHRATDPAVECLLVPDMALACAERFATDGKNVLVLLTDMTAFADAIK 248

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EIA    ++P  RGYP S++S+L    E+   S ++ G+IT +    + GD+   P+ D+
Sbjct: 249 EIAITMDQVPSNRGYPGSLYSDLASRYEK-AVSIEDSGSITVIGVTTMPGDDVTHPVPDN 307

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRF 383
              I +G   L+        +  +DP  S+SRL      K    D   L +++  L    
Sbjct: 308 TGYITEGQFYLH--------HGKIDPFGSLSRLKQLVIGKVTRDDHGDLANAMIRLYAES 359

Query: 384 EETRDIRLIG 393
           ++ R+ + +G
Sbjct: 360 KKARERQAMG 369


>gi|15925095|ref|NP_372629.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927679|ref|NP_375212.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus N315]
 gi|21283758|ref|NP_646846.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49484329|ref|YP_041553.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49486898|ref|YP_044119.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87160882|ref|YP_494706.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196009|ref|YP_500822.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268556|ref|YP_001247499.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394620|ref|YP_001317295.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980420|ref|YP_001442679.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161510312|ref|YP_001575971.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141624|ref|ZP_03566117.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253731057|ref|ZP_04865222.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733061|ref|ZP_04867226.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006893|ref|ZP_05145494.2| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257426244|ref|ZP_05602659.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428902|ref|ZP_05605296.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431511|ref|ZP_05607884.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257434220|ref|ZP_05610570.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257437133|ref|ZP_05613173.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257793863|ref|ZP_05642842.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9781]
 gi|258422053|ref|ZP_05684970.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9719]
 gi|258422895|ref|ZP_05685795.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9635]
 gi|258433578|ref|ZP_05688651.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9299]
 gi|258440473|ref|ZP_05690643.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A8115]
 gi|258445681|ref|ZP_05693859.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6300]
 gi|258450135|ref|ZP_05698230.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6224]
 gi|258453185|ref|ZP_05701176.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A5948]
 gi|258453410|ref|ZP_05701392.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A5937]
 gi|262049272|ref|ZP_06022147.1| ATP synthase subunit A [Staphylococcus aureus D30]
 gi|262052608|ref|ZP_06024802.1| ATP synthase subunit A [Staphylococcus aureus 930918-3]
 gi|269203741|ref|YP_003283010.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894749|ref|ZP_06302975.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A8117]
 gi|282904774|ref|ZP_06312648.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906449|ref|ZP_06314300.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909418|ref|ZP_06317233.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911670|ref|ZP_06319469.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914954|ref|ZP_06322734.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917454|ref|ZP_06325207.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920283|ref|ZP_06328007.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923093|ref|ZP_06330778.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9765]
 gi|282925494|ref|ZP_06333148.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282929029|ref|ZP_06336614.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A10102]
 gi|283771273|ref|ZP_06344162.1| atpA ATP synthase CF1 alpha subunit [Staphylococcus aureus subsp.
           aureus H19]
 gi|283958885|ref|ZP_06376330.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284025139|ref|ZP_06379537.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 132]
 gi|293509022|ref|ZP_06667809.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510937|ref|ZP_06669636.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547539|ref|ZP_06672214.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294850075|ref|ZP_06790812.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|295407035|ref|ZP_06816837.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295428692|ref|ZP_06821318.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296275416|ref|ZP_06857923.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297210074|ref|ZP_06926467.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246034|ref|ZP_06929891.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297589828|ref|ZP_06948468.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|300910437|ref|ZP_07127889.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304379286|ref|ZP_07362025.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54036783|sp|P63676|ATPA_STAAW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|54036793|sp|P99111|ATPA_STAAN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|54040853|sp|P63675|ATPA_STAAM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|60389597|sp|Q6G7K5|ATPA_STAAS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|60389622|sp|Q6GEX0|ATPA_STAAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119367964|sp|Q2FWE8|ATPA_STAA8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007214|sp|Q2FF22|ATPA_STAA3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201682|sp|A7X4U5|ATPA_STAA1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081321|sp|A6U3J0|ATPA_STAA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081322|sp|A5IUQ0|ATPA_STAA9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081323|sp|A8YY72|ATPA_STAAT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|13701899|dbj|BAB43191.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus N315]
 gi|14247878|dbj|BAB58267.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205200|dbj|BAB95894.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus MW2]
 gi|49242458|emb|CAG41174.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245341|emb|CAG43816.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|87126856|gb|ABD21370.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203567|gb|ABD31377.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741625|gb|ABQ49923.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947072|gb|ABR53008.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156722555|dbj|BAF78972.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369121|gb|ABX30092.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating
           F-type ATPase epsilon alpha subunit [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253725184|gb|EES93913.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728969|gb|EES97698.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257270949|gb|EEV03122.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274244|gb|EEV05761.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257277752|gb|EEV08422.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257280859|gb|EEV11004.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257283526|gb|EEV13653.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257787835|gb|EEV26175.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9781]
 gi|257841953|gb|EEV66385.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9719]
 gi|257846919|gb|EEV70933.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9635]
 gi|257849309|gb|EEV73288.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9299]
 gi|257852542|gb|EEV76460.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A8115]
 gi|257855520|gb|EEV78457.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6300]
 gi|257856609|gb|EEV79515.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6224]
 gi|257859131|gb|EEV81988.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A5948]
 gi|257864391|gb|EEV87137.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A5937]
 gi|259159478|gb|EEW44528.1| ATP synthase subunit A [Staphylococcus aureus 930918-3]
 gi|259162637|gb|EEW47204.1| ATP synthase subunit A [Staphylococcus aureus D30]
 gi|262076031|gb|ACY12004.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269941704|emb|CBI50111.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus TW20]
 gi|282312895|gb|EFB43296.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316143|gb|EFB46524.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318656|gb|EFB49013.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321157|gb|EFB51488.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324435|gb|EFB54748.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326688|gb|EFB56986.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330399|gb|EFB59917.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282589335|gb|EFB94427.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A10102]
 gi|282593284|gb|EFB98281.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9765]
 gi|282594807|gb|EFB99784.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282762837|gb|EFC02971.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A8117]
 gi|283459478|gb|EFC06571.1| atpA ATP synthase CF1 alpha subunit [Staphylococcus aureus subsp.
           aureus H19]
 gi|283471322|emb|CAQ50533.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283789603|gb|EFC28426.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817769|gb|ADC38256.1| ATP synthase alpha chain [Staphylococcus aureus 04-02981]
 gi|290919659|gb|EFD96732.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094726|gb|EFE24998.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466222|gb|EFF08749.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|294823023|gb|EFG39455.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|294968060|gb|EFG44087.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295127362|gb|EFG57002.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296885274|gb|EFH24214.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177033|gb|EFH36288.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297576956|gb|EFH95670.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695379|gb|ADI98601.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300888279|gb|EFK83470.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302333751|gb|ADL23944.1| ATP synthase subunit alpha, AtpA [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751986|gb|ADL66163.1| ATP synthase subunit alpha, AtpA [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342145|gb|EFM08045.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312437477|gb|ADQ76548.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312830457|emb|CBX35299.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128776|gb|EFT84776.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315193270|gb|EFU23668.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315196961|gb|EFU27303.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140723|gb|EFW32575.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143699|gb|EFW35476.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323439346|gb|EGA97070.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus O11]
 gi|323442445|gb|EGB00074.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus O46]
 gi|329314790|gb|AEB89203.1| ATP synthase subunit alpha [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329724003|gb|EGG60527.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726305|gb|EGG62773.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729266|gb|EGG65674.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           21193]
          Length = 502

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ +V + P  GI E    GD V   GR    P      GRV+N LG+PIDG   +    
Sbjct: 70  NVGVVILGPYTGITE----GDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGSAQIKAMKKVAGTL 382


>gi|150187390|emb|CAK30247.1| ATP synthase alpha subunit [Streptococcus marimammalium]
          Length = 362

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 159/346 (45%), Gaps = 18/346 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G F + Q   S+++G +I           +G    I  GDLV   G+    P      GR
Sbjct: 19  GVFGMAQNLESNDIGIII-----------LGDFSSIREGDLVKRTGKIMEVPVGEELIGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG P+DG   + K D +  + +  P  M R+ V +  +TG++ ID   P+  GQR 
Sbjct: 68  VVNPLGIPVDGLGDI-KTDKTRPVETPAPGVMERKSVSEPLQTGLKAIDALVPIGRGQRE 126

Query: 165 GVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
            +      GK+ +   ++  + D     I   +G++   VR  +E       L  ++VV 
Sbjct: 127 LIIGDRQTGKTAVAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRRHGALDYTIVVT 186

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P    
Sbjct: 187 ASASQPSPLLFIAPYAGVAMAEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREA 246

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I L 
Sbjct: 247 YPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQ 306

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SL   G  P +D  +SVSR+   A     KK+  +L   +  + E
Sbjct: 307 ESLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRE 352


>gi|115391887|ref|YP_778475.1| ATP synthase CF1 alpha subunit [Jasminum nudiflorum]
 gi|122164988|sp|Q06RE6|ATPA_JASNU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|110456208|gb|ABG74613.1| ATPase alpha subunit [Jasminum nudiflorum]
          Length = 504

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 156/331 (47%), Gaps = 9/331 (2%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +
Sbjct: 63  IALNLESTNVGVVLMGDGLMIEEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 SASE-SRLIESPAPGIISRRSVYEPLQTGLVAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
               +     VI   V  G++   V + +     G  ++ ++VV   +D    L+ +AP 
Sbjct: 182 DTILNQQGQNVICVYVAIGQKASSVAQVVTTLQEGGAMEYTIVVAEMADSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
              S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKSNSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A +   K++   L   + +F E
Sbjct: 362 ISVSRVGSAAQTKAMKQVAGKLKLELAQFTE 392


>gi|50554109|ref|XP_504463.1| YALI0E27346p [Yarrowia lipolytica]
 gi|49650332|emb|CAG80064.1| YALI0E27346p [Yarrowia lipolytica]
          Length = 512

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 156/327 (47%), Gaps = 19/327 (5%)

Query: 56  SDNLGQV--IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113
           S+  GQV  +R +  IV +     G ++    + F     +I+ S    GRV +   +PI
Sbjct: 64  SERAGQVLEVRGSRAIVQVFEGTSGIDVKKTKVEFTGENLKIAVSEDVLGRVFDGSARPI 123

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    +   D  ++I        +R   E+   TGI  ID    +  GQ+I +F+ SG+ 
Sbjct: 124 DNGPKVFAEDY-LDINGSPINPYSRIYPEEMISTGISTIDTMNSIARGQKIPIFSASGLP 182

Query: 174 KSTLLSMFARS--------DCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSV 218
            + + +   R         D  D       ++ + +G      R F +D+     L+++ 
Sbjct: 183 HNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQDFEASGALERTS 242

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277
           + +  +++  I R + P  A+T AEY + + + +VL IL  ++ +A ++RE++    E+P
Sbjct: 243 LFLNLANDPTIERIITPRLALTTAEYLAYQTERHVLTILTDMSSYADALREVSAAREEVP 302

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             RGYP  ++++L  + ER G  E   G+IT V  + +  D+   PI D    I +G I 
Sbjct: 303 GRRGYPGYMYTDLSTIYERAGRVEGRNGSITQVPILTMPNDDITHPIPDLTGYITEGQIS 362

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA 364
           ++R L   G YPP++ L S+SRL   A
Sbjct: 363 VDRQLYNRGIYPPINVLPSLSRLMKSA 389


>gi|29565568|ref|NP_817146.1| ATP synthase CF1 alpha subunit [Pinus koraiensis]
 gi|75299058|sp|Q85X67|ATPA_PINKO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|29469667|gb|AAO73995.1| H+-ATPase alpha subunit [Pinus koraiensis]
          Length = 494

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 155/334 (46%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG 
Sbjct: 60  TVGIALNLGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GQISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G+R   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S+  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     KK+   L   + +F E
Sbjct: 359 NVGLSVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|113972254|ref|YP_736047.1| F0F1 ATP synthase subunit alpha [Shewanella sp. MR-4]
 gi|114049503|ref|YP_740053.1| F0F1 ATP synthase subunit alpha [Shewanella sp. MR-7]
 gi|123029178|sp|Q0HD77|ATPA_SHESM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123130903|sp|Q0HPF9|ATPA_SHESR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|113886938|gb|ABI40990.1| ATP synthase F1, alpha subunit [Shewanella sp. MR-4]
 gi|113890945|gb|ABI44996.1| ATP synthase F1, alpha subunit [Shewanella sp. MR-7]
          Length = 513

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  ++     S +E+++  P  + R+ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGAIDNDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ +   ++  + D   K +   VG++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ E+  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASEAAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G    + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERASRVNEEYVEKFTKGAVTGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|58699771|ref|ZP_00374411.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58533712|gb|EAL58071.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 402

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 164/340 (48%), Gaps = 15/340 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G V+ ++ D   I  +G   ++  GD+V   G     P      GRV+NALG P+D D  
Sbjct: 63  GIVLDLDHDTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGHPMD-DGG 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +    M+I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+ 
Sbjct: 122 EIRAKNRMDIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIA 181

Query: 179 --SMFARSDCFDKV--------IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             ++  +    D+V        +   +G++   V + +        L+ + VVVA++ + 
Sbjct: 182 LDTIINQKKINDEVNENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDC 241

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +AP    TI E+F   G + L+I D +++ A + R+++      P    YP  +F
Sbjct: 242 APMQFLAPYAGCTIGEFFRDNGMHCLIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIF 301

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +K +G++TA+  V     + +  +  +V SI DG I L   L  +
Sbjct: 302 YVHSRLLERAAKMSDKKGQGSLTALPIVETQAGDVSAYVPTNVISITDGQIFLESELFYK 361

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P V+   SVSR+   A     KK+  S+   + ++ E
Sbjct: 362 GFRPAVNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRE 401


>gi|219684769|ref|ZP_03539711.1| V-type ATP synthase beta chain (V-type ATPase subunit B) [Borrelia
           garinii PBr]
 gi|219671714|gb|EED28769.1| V-type ATP synthase beta chain (V-type ATPase subunit B) [Borrelia
           garinii PBr]
          Length = 433

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    IS  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGISTSDEIKFLGHSMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPRDGGPSLD--DNLIEIGG--PSANPAKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLLRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ KG  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRTIFFVHTANDSVVESLTVPDISLSVAEKFALKGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITILAVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ S+  L    +++ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNGRTRDDHRTIMDSMIKLYASSKDSVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|257042520|gb|ACV32794.1| ATP synthase CF1 alpha subunit [Pinus monticola]
 gi|257042607|gb|ACV32878.1| ATP synthase CF1 alpha subunit [Pinus monticola]
 gi|257042635|gb|ACV32905.1| ATP synthase CF1 alpha subunit [Pinus monticola]
 gi|257042692|gb|ACV32960.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 155/334 (46%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG 
Sbjct: 60  TVGIALNLGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GQISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G+R   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S+  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     KK+   L   + +F E
Sbjct: 359 NVGLSVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|14717978|gb|AAK72731.1| ATP synthase beta subunit [Cabomba caroliniana]
          Length = 275

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 32  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 91

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 92  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 151

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 152 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 209

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 210 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 257


>gi|58337088|ref|YP_193673.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus NCFM]
 gi|75432973|sp|Q5FKY2|ATPA_LACAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|58254405|gb|AAV42642.1| ATP synthase alpha subunit [Lactobacillus acidophilus NCFM]
          Length = 503

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 162/359 (45%), Gaps = 28/359 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G F + Q   S+++G +I           +G  + I  GD V   GR    P      GR
Sbjct: 58  GSFGIAQNLESNDVGIII-----------LGQFDNIREGDRVQRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I +K P  M+RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGLGEI-KSDKTRPIEAKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------ 216
            +      GK++L +         D + I + +G++   VR  +E      LK+      
Sbjct: 166 LIIGDRKTGKTSLAIDTILNQKGQDVICIYVAIGQKESTVRTQVE-----TLKRFGAMDY 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 221 TIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG
Sbjct: 281 PGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDG 340

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E       G
Sbjct: 341 QIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLTAYRELESFAQFG 399


>gi|159027205|emb|CAO89299.1| atpA [Microcystis aeruginosa PCC 7806]
          Length = 502

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 156/338 (46%), Gaps = 15/338 (4%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G  I  G  V   G+    P      GRV++ALG+PIDG 
Sbjct: 60  TVGIALNLEEDNVGAVLMGDGFGIKEGGTVKATGKIAQVPVGDALVGRVVDALGRPIDG- 118

Query: 117 DSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KGD+    +  + S  P  + R+ V +  +TGI  ID   P+  GQR  +      
Sbjct: 119 ----KGDILASETRLVESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKT 174

Query: 173 GKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           GK+ + +         D + + + +G++   V + I+       +  +VVV A +++   
Sbjct: 175 GKTAIAIDTIINQKTEDVICVYVAIGQKASTVAQVIDTLTQRGAMDYTVVVAANANDPAT 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP T  +IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF  
Sbjct: 235 LQYIAPYTGASIAEYFMYKGKATLVIYDDLTKQAQAYRQLSLLMRRPPGREAYPGDVFYL 294

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER          G++TA+  +     + +  I  +V SI DG I L+  L   G 
Sbjct: 295 HSRLLERAAKLSDALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSTDLFNAGF 354

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P ++   SVSR+   A +   KK+   L   + +F+E
Sbjct: 355 RPAINAGISVSRVGSAAQTKAMKKVAGKLKLELAQFDE 392


>gi|238921741|ref|YP_002935256.1| F0F1 ATP synthase subunit alpha [Edwardsiella ictaluri 93-146]
 gi|259585427|sp|C5BF38|ATPA_EDWI9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|238871310|gb|ACR71021.1| ATP synthase subunit alpha [Edwardsiella ictaluri 93-146]
          Length = 513

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG +  +  S V    P  + RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGEPIDG-----KGPVEHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K I   VG++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAVDAIINQRDSGIKCIYVAVGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNAEYVETFTKGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|161511799|emb|CAP16910.1| ATP synthase alpha subunit [Pediococcus inopinatus]
          Length = 334

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 145/313 (46%), Gaps = 11/313 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 25  GMVQNLESNDVGIVILGGYDDIREGDTVKRTGRIMEVPVGDALVGRVVNTLGQPIDGKGE 84

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 85  I-KTDHTRPVERKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 143

Query: 179 --SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D     I   +G++   VR   + +E Y    +  ++V+ A   E   +  +
Sbjct: 144 IDTILNQKDQNIICIYVAIGQKESTVRTQVDTLEKY--GAMDYTIVLSAGPSEPAPMLYL 201

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RL
Sbjct: 202 APYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRL 261

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  V     +    I  +V SI DG I L+  L   G  P +
Sbjct: 262 LERAAKLNDELGAGSMTALPFVETKAGDIAAYIPTNVISITDGQIFLDSDLFYSGTRPAI 321

Query: 352 DPLASVSRLADKA 364
           D  +SVSR+   A
Sbjct: 322 DAGSSVSRVGGDA 334


>gi|240851268|ref|YP_002972671.1| ATP synthase alpha chain [Bartonella grahamii as4aup]
 gi|240268391|gb|ACS51979.1| ATP synthase alpha chain [Bartonella grahamii as4aup]
          Length = 511

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 19/343 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + + +D V +   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMSLNLEVDNVGVVIFGSDRDIREGDCVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-L 177
           + K      +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK+  L
Sbjct: 121 I-KATERRRVDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGKTAIL 179

Query: 178 LSMFARSDCF---------DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVATS 224
           L  F     F         DKV  I   +G++   V +F++  +  G  L+ S++V AT+
Sbjct: 180 LDTFLNQKPFHEKGAGREQDKVYCIYVAIGQKRSTVAQFVKVLEERG-ALEYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +APL    + EYF   G + L+  D +++ A + R+++      P    YP 
Sbjct: 239 SDPAPLQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L  +L
Sbjct: 299 DVFYLHSRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 359 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 401


>gi|317055017|ref|YP_004103484.1| ATP synthase F1 subunit alpha [Ruminococcus albus 7]
 gi|315447286|gb|ADU20850.1| ATP synthase F1, alpha subunit [Ruminococcus albus 7]
          Length = 504

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G  E I  G  V   GR    P      GRV+NALG PIDG  +
Sbjct: 61  GMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAMLGRVVNALGAPIDGKGA 120

Query: 119 LGKGDLSMEIMSKVPPA---MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           +    L+ E      PA   + R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 121 I----LTNETRPVESPAFGIITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGKT 176

Query: 176 TL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRK 232
           T+ L         + + I + +G++   V   ++     D +  S+VV AT+ E   L+ 
Sbjct: 177 TIALDTIINQKGKNVICIYVAIGQKISTVANIVDTLTKNDAMDYSIVVSATASEMAPLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V +AEYF  +G +VL + D +++ A + R ++           YP  VF    R
Sbjct: 237 IAPYAGVAMAEYFMLQGKDVLCVYDDLSKHAVAYRTMSLLLKRPTGREAYPGDVFYLHSR 296

Query: 293 LLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     ++   G+ITA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 297 LLERACCLNEDNGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETELFFSGVRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+P  SVSR+   A     KK+   L  L  ++ E +     G     +D      + Q 
Sbjct: 357 VNPGISVSRVGGSAQIKAMKKVSGPLKLLYSQYRELQSFSQFGS---DLDQDTKDRLAQG 413

Query: 411 PIIYDFLKQ---SPSDLSSEDVF 430
             I + LKQ   SP D+  + V 
Sbjct: 414 ERIVEVLKQSKNSPVDVEKQVVI 436


>gi|260102578|ref|ZP_05752815.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
 gi|260083605|gb|EEW67725.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
 gi|323466859|gb|ADX70546.1| Proton-translocating ATPase alpha subunit [Lactobacillus helveticus
           H10]
          Length = 506

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 170/381 (44%), Gaps = 19/381 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           I+ +  V Y    +++   L + +  +    DN    I  NLD   V I  +G  + I  
Sbjct: 28  INEVGVVTYVGDGIARAHGLNNALAGELLKFDNGSYGIAQNLDSSDVGIIILGQFDNIRE 87

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG   + K D +  I  K P  M+RQ V 
Sbjct: 88  GDRVQRTGRIMSVPVGDALIGRVVNPLGQPVDGLGEI-KSDKTRPIEEKAPGVMDRQSVN 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + +G++  
Sbjct: 147 QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKNQDVICIYVAIGQKES 206

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 207 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLI 261

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER    S+K   G++TA+  
Sbjct: 262 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPI 321

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 322 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 381

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             +L   +  + E       G
Sbjct: 382 AGTLRTDLAAYRELESFAQFG 402


>gi|218781466|ref|YP_002432784.1| F0F1 ATP synthase subunit alpha [Desulfatibacillum alkenivorans
           AK-01]
 gi|226739869|sp|B8FGT6|ATPA_DESAA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218762850|gb|ACL05316.1| ATP synthase F1, alpha subunit [Desulfatibacillum alkenivorans
           AK-01]
          Length = 505

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 165/369 (44%), Gaps = 14/369 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           LG V+ +  D V +  +G    I  GD+V   G+    P      GRV++ +G PIDG  
Sbjct: 60  LGLVLNLEEDNVGVAIMGEVTHIKEGDMVKRTGKIAQVPVGEAVLGRVVDGVGSPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  M  M   P  + R+ V +   TG++ +D  TP+  GQR  +     IGK+ +
Sbjct: 120 PLDATETRMVEMV-APGVIARKSVHEPCYTGLKAVDAMTPVGRGQRELIIGDRQIGKTAV 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRK 232
              ++ A+ D     I    G++   V + +   E Y    ++ + VV A + +   L+ 
Sbjct: 179 AVDAILAQKDTDIYCIYVACGQKKSTVAQVVATLEKY--GAMEYTTVVSACASDPATLQY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + EYF  KG + L+I D +++ A + R+I+      P    YP  +F    R
Sbjct: 237 LAPYAGCAMGEYFRDKGQHALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDIFYNHSR 296

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 297 LLERAAKVSDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEPGLFFAGVRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + +F   R++     +   +D    K + + 
Sbjct: 357 INVGLSVSRVGGAAQEKAMKQVAGTLRMDLAQF---RELEAFAAFGSDLDAATQKQLKRG 413

Query: 411 PIIYDFLKQ 419
             +   LKQ
Sbjct: 414 ERLVQILKQ 422


>gi|88603020|ref|YP_503198.1| V-type ATP synthase subunit B [Methanospirillum hungatei JF-1]
 gi|121730845|sp|Q2FL44|VATB2_METHJ RecName: Full=V-type ATP synthase beta chain 2; AltName:
           Full=V-ATPase subunit B 2
 gi|88188482|gb|ABD41479.1| Sodium-transporting two-sector ATPase [Methanospirillum hungatei
           JF-1]
          Length = 466

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 13/270 (4%)

Query: 103 GRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV++ +G+P DG  + + +  L +  M   P   +R +  +  +TGI  ID    L  G
Sbjct: 93  GRVLDGVGRPRDGGPEIIPEARLDIAGMPINP--YSRDKPAEFIQTGISAIDALNTLVRG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN- 213
           Q++ +F+G+G+  + L +  A+        + F  V+ + +G   +E   F++++     
Sbjct: 151 QKLPIFSGAGLPANQLAAQIAKQAKVLGEGENF-AVVFAAMGITYKEASFFMKEFEESGA 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272
           L++ V  +  +D+  I R   P  A+T AE+ +   + +VL+IL  +T +  ++REI+T 
Sbjct: 210 LERVVFFLNLADDPTIERIATPRCALTAAEFLAYTHNLHVLVILTDMTNYCDALREISTA 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
             E+P  RGYP  ++++L  + ER G  +   G+IT +  + +  D+   P+ D    I 
Sbjct: 270 REEIPGRRGYPGYMYTDLATIYERAGRIKGCTGSITQIPILTMPDDDITHPVPDLTGYIT 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +G IVL+R L  +G  PP+D L  +SRL +
Sbjct: 330 EGQIVLSRDLFRKGINPPIDALPCLSRLMN 359


>gi|86438838|emb|CAJ43384.1| ATP synthase alpha subunit [Lactobacillus helveticus]
          Length = 364

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 157/342 (45%), Gaps = 19/342 (5%)

Query: 57  DNLGQVIRINLDI--VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPI 113
           DN    I  NLD   V I  +G  + I  GD V   GR    P      GRV+N LG+P+
Sbjct: 14  DNGSYGIAQNLDSSDVGIIILGQFDNIREGDRVQRTGRIMSVPVGDALIGRVVNPLGQPV 73

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + K D +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      G
Sbjct: 74  DGLGEI-KSDKTRPIEEKAPGVMDRQSVNQPLQTGIKAIDALAPIGRGQRELIIGDRKTG 132

Query: 174 KSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSD 225
           K++L +         D + I + +G++   VR  +E      LK+      ++VV A   
Sbjct: 133 KTSLAIDTILNQKNQDVICIYVAIGQKESTVRTQVE-----TLKRFGAMDYTIVVEAGPS 187

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           E   +  +AP     + E F   G +VL++ D +++ A + RE++      P    YP  
Sbjct: 188 EPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGD 247

Query: 286 VFSELPRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER    S+K   G++TA+  +  +  + +  I  +V SI DG I L   L 
Sbjct: 248 VFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLF 307

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             G  P +D   SVSR+   A     KK+  +L   +  + E
Sbjct: 308 FAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRE 349


>gi|328468722|gb|EGF39704.1| F0F1 ATP synthase subunit alpha [Lactobacillus helveticus MTCC
           5463]
          Length = 503

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 171/383 (44%), Gaps = 23/383 (6%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           I+ +  V Y    +++   L + +  +    DN    I  NLD   V I  +G  + I  
Sbjct: 25  INEVGVVTYVGDGIARAHGLNNALAGELLKFDNGSYGIAQNLDSSDVGIIILGQFDNIRE 84

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQR 140
           GD V   GR    P      GRV+N LG+P+DG   LG  K D +  I  K P  M+RQ 
Sbjct: 85  GDRVQRTGRIMSVPVGDALIGRVVNPLGQPVDG---LGEIKSDKTRPIEEKAPGVMDRQS 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGER 198
           V +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + +G++
Sbjct: 142 VNQPLQTGIKAIDALAPIGRGQRELIIGDRKTGKTSLAIDTILNQKNQDVICIYVAIGQK 201

Query: 199 GREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
              VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +V
Sbjct: 202 ESTVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDV 256

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAV 310
           L++ D +++ A + RE++      P    YP  VF    RLLER    S+K   G++TA+
Sbjct: 257 LIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTAL 316

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     K
Sbjct: 317 PIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMK 376

Query: 371 KLVSSLTHLIHRFEETRDIRLIG 393
           K+  +L   +  + E       G
Sbjct: 377 KVAGTLRTDLAAYRELESFAQFG 399


>gi|292559496|ref|YP_003540916.1| ATP synthase CF1 alpha chain [Phoenix dactylifera]
 gi|290790904|gb|ADD63159.1| ATP synthase CF1 alpha chain [Phoenix dactylifera]
 gi|294620562|gb|ADF28132.1| ATP synthase CF1 alpha chain [Phoenix dactylifera]
          Length = 514

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 169/372 (45%), Gaps = 10/372 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISASE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSNSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++       + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LEAFAQFASDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPSD 423
            + + LKQS SD
Sbjct: 416 RLRELLKQSQSD 427


>gi|239637398|ref|ZP_04678380.1| ATP synthase F1, alpha subunit [Staphylococcus warneri L37603]
 gi|239596998|gb|EEQ79513.1| ATP synthase F1, alpha subunit [Staphylococcus warneri L37603]
          Length = 502

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 151/326 (46%), Gaps = 10/326 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EIS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---TEISEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFAR 183
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+ +     
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTILN 185

Query: 184 SDCFDKVIISL-VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
               D + I + +G++   VR  +E       L  ++VV A++ E   L  +AP   VT+
Sbjct: 186 QKTEDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEE 385
           +   A     KK+  +L   +  + E
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRE 391


>gi|34501429|ref|NP_904216.1| ATP synthase CF1 alpha subunit [Physcomitrella patens subsp.
           patens]
 gi|75294050|sp|Q6YXK3|ATPA_PHYPA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|34494799|dbj|BAC85066.1| ATP synthase alpha subunit [Physcomitrella patens subsp. patens]
          Length = 507

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 12/380 (3%)

Query: 13  EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           EDYS+ + VV  G +  +      +  L + V  G+ V  +    +++G  + +  D V 
Sbjct: 18  EDYSQEIKVVNVGTVLQVGDGIARIYGLDK-VMAGELVEFE---DNSIGIALNLESDNVG 73

Query: 72  ICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +  + I S
Sbjct: 74  VVLMGDGLTIQEGSSVKATGKIAQIPVSDGYLGRVVNALAQPIDGKGQIPASEFRL-IES 132

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +     V
Sbjct: 133 SAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGQNV 192

Query: 191 IISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSS 247
           I   V  G++   V + +  +      +  +VVA +  SP  L+ +AP T   +AEYF  
Sbjct: 193 ICVYVAIGQKASSVAQVVNTFEERGALEYTIVVAEAANSPATLQYLAPYTGAALAEYFMY 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKG 305
           +  + L+I D +++ A + R+++      P    YP  VF    RLLER     S+  +G
Sbjct: 253 RKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEG 312

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A 
Sbjct: 313 SMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQ 372

Query: 366 SADEKKLVSSLTHLIHRFEE 385
               K++   L   + +F E
Sbjct: 373 IKAMKQVAGKLKLELAQFAE 392


>gi|308189783|ref|YP_003922714.1| ATP synthase alpha chain [Mycoplasma fermentans JER]
 gi|319777001|ref|YP_004136652.1| ATP synthase subunit alpha [Mycoplasma fermentans M64]
 gi|307624525|gb|ADN68830.1| ATP synthase alpha chain [Mycoplasma fermentans JER]
 gi|318038076|gb|ADV34275.1| ATP synthase subunit alpha [Mycoplasma fermentans M64]
          Length = 528

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 155/333 (46%), Gaps = 9/333 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V+ +  ++V +   G    +S GD     G    I       GRV+NALG+PIDG   
Sbjct: 61  GLVLNLEEEVVGVTIFGNANSLSEGDTCKRSGEVISIPVGDKLLGRVVNALGQPIDGKGK 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +    +  EI    P  M RQ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 INT-TVKKEIFKVAPGVMTRQEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
             ++  +       I   +G++   V + ++  L D   ++ + VVV+ + E    + +A
Sbjct: 180 IDTIINQKGKNVNCIYVAIGQKNSTVAQIVKK-LEDTGAMEYTTVVVSGASELAPQQYIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P + VTIAE + +KG + L++ D +++ A + R ++      P    YP  VF    +LL
Sbjct: 239 PYSGVTIAEEWMAKGKDCLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSQLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     KE   G+ITA+  +     + +  I  +V SI DG I    +L   G+ P VD
Sbjct: 299 ERAARVTKEYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQRPAVD 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A     KK+  SL   + ++ E
Sbjct: 359 VGFSVSRVGSAAQIKAMKKVAGSLKLELAQYNE 391


>gi|302415164|ref|XP_003005414.1| ATP synthase subunit alpha [Verticillium albo-atrum VaMs.102]
 gi|261356483|gb|EEY18911.1| ATP synthase subunit alpha [Verticillium albo-atrum VaMs.102]
          Length = 534

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 14/296 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ALG PIDG   L   +       K P  + RQ V +  +TG++ ID   P+  GQ
Sbjct: 129 GRVIDALGNPIDGKGPLNTSE-KRRAQLKAPGILPRQSVNQPVQTGLKSIDAMVPIGRGQ 187

Query: 163 RIGVFAGSGIGKST-----LLSMFARSDCFDK-----VIISLVGERGREVREFIEDYL-G 211
           R  +      GK+      +L+    ++  D+      +   VG++   V + ++     
Sbjct: 188 RELIIGDRQTGKTAVALDAMLNQKRWNNSNDEEKKLYCVYVAVGQKRSTVSQLVKTLEEN 247

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D +K S+VV AT+ E+  L+ +AP T   +AE+F   G + L+I D +++ A + R+++ 
Sbjct: 248 DAMKYSIVVAATASEAAPLQYIAPFTGAAVAEWFRDNGKHSLVIYDDLSKQAVAYRQMSL 307

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVR 329
                P    YP  VF    RLLER     K+   G++TA+  +   G + +  I  +V 
Sbjct: 308 LLRRPPGREAYPGDVFYLHSRLLERAAKMNKKLGGGSMTALPIIETQGGDVSAYIPTNVI 367

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SI DG I L   L  +G  P ++   SVSR+   A     K++  SL   + ++ E
Sbjct: 368 SITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQYRE 423


>gi|218439572|ref|YP_002377901.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. PCC 7424]
 gi|226739866|sp|B7KKR4|ATPA_CYAP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218172300|gb|ACK71033.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 7424]
          Length = 503

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 156/335 (46%), Gaps = 9/335 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G  I  G  V   GR    P       R+++ALG+PIDG 
Sbjct: 60  TIGIALNLEEDNVGAVLMGSGYGIQEGSTVKATGRIAQVPVGEALVSRIVDALGRPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GPINTNETRL-LESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTA 178

Query: 177 L-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRK 232
           + +         D + + + +G++   V + + D L +   +  +VVV A++++   L+ 
Sbjct: 179 IAIDTIINQKGEDVICVYVAIGQKASTVAQVV-DTLTEKGAMDYTVVVSASANDPATLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  TIAEYF  KG   L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQISLLMRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 298 LLERAAKLNDQLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A +   K++   L   + +F E
Sbjct: 358 INAGISVSRVGSAAQTKAMKQVAGKLKLELAQFAE 392


>gi|149384437|gb|ABR25041.1| ATP synthase beta chain [Blechnum polypodioides]
          Length = 385

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 139/270 (51%), Gaps = 21/270 (7%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    +       +S+ G  G   RE
Sbjct: 40  FETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTRE 99

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R     TA T+AEYF      +V
Sbjct: 100 GNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDV 159

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
            L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 160 PLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQA 217

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  
Sbjct: 218 VYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHY 276

Query: 373 --VSSLTHLIHRFEETRDIRLIGGYRPGVD 400
                +   + R++E +DI  I    PG+D
Sbjct: 277 DTAQGVKQTLQRYKELQDIIAI----PGLD 302


>gi|154424943|emb|CAL18574.1| ATP synthase alpha subunit [Streptococcus hyointestinalis]
          Length = 367

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 148/312 (47%), Gaps = 7/312 (2%)

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           EI  GD V   G+    P      GRV+N LG+P+DG   + K  ++  + +  P  M R
Sbjct: 42  EIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGEI-KTTVTRPVETPAPGVMQR 100

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VG 196
           + V +  +TG++ ID   P+  GQR  +      GK+++ +         D + I + +G
Sbjct: 101 KSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIG 160

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   VR  +E       L  ++VV A++ +   L  +AP   V +AE F   G +VL++
Sbjct: 161 QKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIV 220

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + RE++      P    YP  VF    RLLER      E   G+ITA+  +
Sbjct: 221 YDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFI 280

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  IA +V SI DG I L  +L   G  P +D  +SVSR+   A     KK+ 
Sbjct: 281 ETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAGSSVSRVGGAAQIKAMKKVA 340

Query: 374 SSLTHLIHRFEE 385
            +L   +  + E
Sbjct: 341 GTLRLDLASYRE 352


>gi|309322330|ref|YP_003934181.1| ATP synthase CF1 alpha chain [Cedrus deodara]
 gi|307683256|dbj|BAJ19564.1| ATP synthase CF1 alpha chain [Cedrus deodara]
          Length = 507

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 18/336 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+    P S  + GRV+NAL +PID
Sbjct: 69  SDNVGAVL-----------MGDGLMIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK
Sbjct: 118 GKGQISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
           + + +    +     VI   V  G++   V + +  +     ++ ++VV  T+D S  L+
Sbjct: 177 TAVATDTILNQKSQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSSATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     S+  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLSSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A     KK+   L   + +F E
Sbjct: 357 AINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|269140872|ref|YP_003297573.1| F0F1-type ATP synthase, alpha subunit [Edwardsiella tarda EIB202]
 gi|267986533|gb|ACY86362.1| F0F1-type ATP synthase, alpha subunit [Edwardsiella tarda EIB202]
 gi|304560630|gb|ADM43294.1| ATP synthase alpha chain [Edwardsiella tarda FL6-60]
          Length = 513

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG +  +  S V    P  + RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGEPIDG-----KGPVEHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  V      GK+ L   ++  + D   K I   VG++   +   +   E++    
Sbjct: 160 GRGQRELVIGDRQTGKTALAVDAIINQRDSGIKCIYVAVGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|182420272|ref|ZP_02951501.1| ATP synthase F1, alpha subunit [Clostridium butyricum 5521]
 gi|237666496|ref|ZP_04526481.1| ATP synthase F1, alpha subunit [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182375867|gb|EDT73459.1| ATP synthase F1, alpha subunit [Clostridium butyricum 5521]
 gi|237657695|gb|EEP55250.1| ATP synthase F1, alpha subunit [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 504

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 158/345 (45%), Gaps = 9/345 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPID 114
           +D  G  + +  D V    +G  E I  GD+V   G+    P      GRV+NALG+ ID
Sbjct: 57  NDVYGMALNLEQDNVGCVLLGSEEGIKEGDIVKGTGKIVQVPVGDALIGRVVNALGEAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D +  I    P  ++R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-LTDETRAIEVPAPSIIDRSSVNEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STL-LSMFARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVVVATSDESPIL 230
           + + +         D + I + +G++   V   +     +G  +  SVVV +T+ ES  L
Sbjct: 176 TAIGIDTILNQKGKDVICIYVAIGQKQSTVAHIVNTLTEMG-AMDYSVVVSSTAAESAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP    +I EYF  +G +VL+I D +++ A + R ++      P    YP  VF   
Sbjct: 235 QYLAPYAGCSIGEYFMHQGKDVLIIYDDLSKHAVAYRAMSLLLKRPPGREAYPGDVFYIH 294

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     +E   G++TA+  +     +    I  +V SI DG I L   L   G+ 
Sbjct: 295 SRLLERSAKLSQELGGGSLTALPIIETQAGDVTAYIPTNVISITDGQIFLEGDLFNAGQR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           P ++P  SVSR+   A     K++  +L   + ++ E       G
Sbjct: 355 PAINPGISVSRVGGNAQIKAMKQVSGTLRLELAQYRELESFAQFG 399


>gi|291531097|emb|CBK96682.1| Archaeal/vacuolar-type H+-ATPase subunit B [Eubacterium siraeum
           70/3]
          Length = 463

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 152/308 (49%), Gaps = 24/308 (7%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           LG+V+ ++ D V +        ISL +  + F      I  S    GR  N  GKPIDG 
Sbjct: 40  LGRVVEMHGDKVVLQVFEGTNGISLTNTKISFTGKPLEIPLSTEMLGRTFNGAGKPIDG- 98

Query: 117 DSLGK------GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
             LG+      GD++   ++ V  +  R  +     TGI  ID    L  GQ++ +F+GS
Sbjct: 99  --LGEVFPQKYGDINGRALNPVARSYPRNYIH----TGISSIDALMTLIRGQKLPIFSGS 152

Query: 171 GIGKSTLL------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVA 222
           G+  + L       +  A S+  D  ++        +V E+ +    +   +++  + + 
Sbjct: 153 GLSHNKLAVQIVKQAKIADSEGKDFAVVFAAMGVQNDVAEYFKRSFEETGVIQRVCMFLN 212

Query: 223 TSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
            S++  I R + P  A+T+AEY +  K  ++L+I+  +T +  ++RE +++ GE+P  +G
Sbjct: 213 LSNDPIIERILTPRCALTVAEYLAFEKNMHILVIMTDLTSYCEALREFSSSKGEIPGRKG 272

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           YP  ++S+L  + ER G  E   G++T +  + +  D+   PI D    I +G IV +R+
Sbjct: 273 YPGYLYSDLASMYERAGVVEGSTGSVTQIPILTMPNDDITHPIPDLTAYITEGQIVFDRN 332

Query: 342 LAEEGRYP 349
           L + G YP
Sbjct: 333 LDQTGIYP 340


>gi|170288893|ref|YP_001739131.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermotoga sp. RQ2]
 gi|170176396|gb|ACB09448.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Thermotoga sp. RQ2]
          Length = 586

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 115/227 (50%), Gaps = 11/227 (4%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RVIDIF P+  G    +  G G GK+      A+    D V+    GERG E+ E +
Sbjct: 209 TGQRVIDIFFPISKGGTAAIPGGFGTGKTITQHQLAKWADADVVVYIGCGERGNEMTEVL 268

Query: 207 EDY-------LGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           E++        G  L    V++A +   P+  R+ +  T +TIAEYF   G +V L+ DS
Sbjct: 269 EEFPHLQDPRTGKPLMDRTVLIANTSNMPVSAREASIYTGITIAEYFRDMGYHVALMADS 328

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK---EKGNITAVISVLV 315
            +R+A ++RE++    E+PV  GYP  + S + +  ER G  E      G++T + +V  
Sbjct: 329 TSRWAEALRELSGRLEEMPVEEGYPAYLASRIAQFYERAGLCENLNGTTGSVTIIGAVSP 388

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            G + ++P+    +  +     L+R+LA    YP ++ + S S  A+
Sbjct: 389 PGGDFSEPVTQHTKRFVRCFWALDRNLAYSRHYPSINWITSYSEYAE 435


>gi|70725931|ref|YP_252845.1| F0F1 ATP synthase subunit alpha [Staphylococcus haemolyticus
           JCSC1435]
 gi|124007216|sp|Q4L7Y6|ATPA_STAHJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|68446655|dbj|BAE04239.1| ATP synthase alpha chain [Staphylococcus haemolyticus JCSC1435]
          Length = 502

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 151/326 (46%), Gaps = 10/326 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     EI+ GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---TEITEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFAR 183
           +  +  K    M R+ V++  +TGI+ ID   P+  GQR  +      GK+T+ +     
Sbjct: 126 TRPVEQKATGVMARKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIGIDTILN 185

Query: 184 SDCFDKVIISL-VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
               D + I + +G++   VR  +E       L  ++VV A++ E   L  +AP + VT+
Sbjct: 186 QKGLDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASASEPSPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEE 385
           +   A     KK+  +L   +  + E
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRE 391


>gi|77361906|ref|YP_341481.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas haloplanktis
           TAC125]
 gi|115312266|sp|Q3IK48|ATPA_PSEHT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|76876817|emb|CAI88039.1| membrane-bound ATP synthase, F1 sector, alpha-subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 513

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 161/345 (46%), Gaps = 26/345 (7%)

Query: 63  IRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
           I +NL+   I  V +G   +++ G  V+  GR    P      GRV+N LG PIDG  +L
Sbjct: 62  IALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGPGLLGRVVNTLGAPIDGKGAL 121

Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                  E + K+ P  + R+ V++  +TG + ID   P+  GQR  +      GK+ L 
Sbjct: 122 DND--GFEPVEKIAPGVIERKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGKTALA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  +     K +   +G++   +   +   E++    L  ++VVVA++ ES  L+ +
Sbjct: 180 IDAIINQKGTGVKCVYVAIGQKASTIANVVRKLEEH--GALANTIVVVASASESAALQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP    T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    RL
Sbjct: 238 APFAGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRL 297

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  +   G++TA+  +   G + +  +  +V SI DG I L  
Sbjct: 298 LERASRVNAEYVEKFTNGEVKGTTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 358 DLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE 402


>gi|161507274|ref|YP_001577228.1| F0F1 ATP synthase subunit alpha [Lactobacillus helveticus DPC 4571]
 gi|172048217|sp|A8YUJ9|ATPA_LACH4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160348263|gb|ABX26937.1| ATP synthase alpha subunit [Lactobacillus helveticus DPC 4571]
          Length = 503

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 170/381 (44%), Gaps = 19/381 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--VYICPVGIGEEISL 83
           I+ +  V Y    +++   L + +  +    DN    I  NLD   V I  +G  + I  
Sbjct: 25  INEVGVVTYVGDGIARAHGLNNALAGELLKFDNGSYGIAQNLDSSDVGIIILGQFDNIRE 84

Query: 84  GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   GR    P      GRV+N LG+P+DG   + K D +  I  K P  M+RQ V 
Sbjct: 85  GDRVQRTGRIMSVPVGDALIGRVVNPLGQPVDGLGEI-KSDKTRPIEEKAPGVMDRQSVN 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK++L +         D + I + +G++  
Sbjct: 144 QPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKNQDVICIYVAIGQKES 203

Query: 201 EVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            VR  +E      LK+      ++VV A   E   +  +AP     + E F   G +VL+
Sbjct: 204 TVRTQVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLI 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-SEK-EKGNITAVIS 312
           + D +++ A + RE++      P    YP  VF    RLLER    S+K   G++TA+  
Sbjct: 259 VFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPI 318

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +  +  + +  I  +V SI DG I L   L   G  P +D   SVSR+   A     KK+
Sbjct: 319 IQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKV 378

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             +L   +  + E       G
Sbjct: 379 AGTLRTDLAAYRELESFAQFG 399


>gi|222150027|ref|YP_002550984.1| F0F1 ATP synthase subunit alpha [Agrobacterium vitis S4]
 gi|254807669|sp|B9JTR4|ATPA_AGRVS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|221737009|gb|ACM37972.1| ATP synthase F1, alpha subunit [Agrobacterium vitis S4]
          Length = 508

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 162/344 (47%), Gaps = 24/344 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G  + +  D V +   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVEVPVGPELLGRVVDALGNPIDG--- 117

Query: 119 LGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KG ++  I S+V    P  + R+ V +   TGI+ ID   P+  GQR  V      GK
Sbjct: 118 --KGPINSAIRSRVDVKAPGIIPRKGVHEPMSTGIKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 S-----TLLSMFARSDCF--DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVAT 223
           +     T L+     D    DK+  +   +G++   V +F++  +  G  LK S+++ AT
Sbjct: 176 TAIILDTFLNQKPAHDAGGDDKMFCVYVAIGQKRSTVAQFVKVLEERG-ALKYSIIIAAT 234

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP    T+ EYF  KG + L+  D +++ A + R+++      P    YP
Sbjct: 235 ASDPAPMQYLAPFAGCTMGEYFRDKGQHALIAYDDLSKQAVAYRQMSLLLRRPPGREAYP 294

Query: 284 TSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E+  G++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 295 GDVFYLHSRLLERAAKLSDERGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 354

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 355 LFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 398


>gi|45200825|ref|NP_986395.1| AGL272Cp [Ashbya gossypii ATCC 10895]
 gi|44985523|gb|AAS54219.1| AGL272Cp [Ashbya gossypii ATCC 10895]
          Length = 547

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 146/297 (49%), Gaps = 14/297 (4%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG PIDG  ++ K   +     K P  + R+ V +  +TG++ +D   P+  G
Sbjct: 143 LGRVVDALGNPIDGKGAI-KASGTSRAQVKAPGILPRRSVHEPVQTGLKAVDALVPIGRG 201

Query: 162 QRIGVFAGSGIGKS-----TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDY-L 210
           QR  +      GK+     T+L+    +   D+      +   VG++   V + ++    
Sbjct: 202 QRELIIGDRQTGKTAVALDTILNQKRWNSSNDESKKLYCVYVAVGQKRSTVAQLVQTLEQ 261

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            D +K SV+V AT+ E+  L+ +AP TA  I E+F   G + L++ D +++ A + R+++
Sbjct: 262 HDAMKYSVIVAATASEAAPLQYIAPFTAAAIGEWFRDNGKHALIVYDDLSKQAVAYRQLS 321

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER    SEK   G++TA+  +   G + +  I  +V
Sbjct: 322 LLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGGGSLTALPVIETQGGDVSAYIPTNV 381

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SI DG I L   L  +G  P ++   SVSR+   A     K++  SL   + ++ E
Sbjct: 382 ISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE 438


>gi|258407031|ref|ZP_05680181.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9763]
 gi|257841364|gb|EEV65808.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9763]
          Length = 502

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 149/318 (46%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ +V + P  GI E    GD V   GR    P      GRV+N LG+PIDG   L    
Sbjct: 70  NVGVVILGPYTGITE----GDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQ-GLINTT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 125 KTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGSAQIKAMKKVAGTL 382


>gi|152980082|ref|YP_001355319.1| F-type H+-transporting ATPase alpha chain [Janthinobacterium sp.
           Marseille]
 gi|166201668|sp|A6T472|ATPA_JANMA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151280159|gb|ABR88569.1| F-type H+-transporting ATPase alpha chain [Janthinobacterium sp.
           Marseille]
          Length = 511

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 185/412 (44%), Gaps = 33/412 (8%)

Query: 35  TVTCLSQYVC----LGDFVVHQGKN----SDNLGQVIRINLDIVYICPVGIGEEISLGDL 86
           TV  +S  +C    L D  V QG+      +  G  + +  D V    +G  E IS GD 
Sbjct: 30  TVISVSDGICRIHGLSD--VMQGEMLEFPGNTFGLALNLERDSVGAVILGEYEHISEGDT 87

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   GR    P     CGRV+NALG+PIDG   +    L+  I    P  + RQ V++  
Sbjct: 88  VKCTGRILEVPIGPELCGRVVNALGQPIDGKGPINT-KLTTPIEKIAPGVIARQSVDQPM 146

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVR 203
           +TGI+ ID   P+  GQR  +      GK+ +   ++  +       I   +G++   ++
Sbjct: 147 QTGIKAIDAMVPIGRGQRELIIGDRQTGKTAVAIDAIINQKGQGVTCIYVAIGQKASSIK 206

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
             +        ++ ++VV AT+ ES  ++ ++  +   + EYF  +G++ L++ D +++ 
Sbjct: 207 NIVRALEQHGAMEYTIVVAATASESAAMQFVSAYSGCAMGEYFRDRGEDALIVYDDLSKQ 266

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITA 309
           A + R+++      P    +P  VF    RLLER              G  + + G++TA
Sbjct: 267 AVAYRQVSLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFTKGAVKGKTGSLTA 326

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  +  +V SI DG I L  SL   G  P ++   SVSR+   A +   
Sbjct: 327 LPIIETQAGDVSAFVPTNVISITDGQIFLETSLFNSGVRPAINAGISVSRVGGAAQT--- 383

Query: 370 KKLVSSLTHLIHR-FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            K++  L+  I     + R++     +   +D    K + +   + + LKQ+
Sbjct: 384 -KVIKGLSGGIRTDLAQYRELAAFAQFASDLDASTRKQLDRGARVTELLKQA 434


>gi|113910938|gb|ABI48201.1| ATPase beta subunit [Dryopteris wallichiana]
          Length = 449

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 29/337 (8%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 69  LGRIPNVLGEPVD---NLGPVQSSATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210
            G +IG+  G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 126 RGGKIGLLGGAGVGKTVLITESINNIAKAHGGVSVSGGAGERTREGNDLYMEMKESKVIN 185

Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA+T+AEYF      +V L +D+I RF  +  
Sbjct: 186 EQNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVPLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+ T++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSTTSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD      R LA +G  P VDPL S S ++ + W   E+       +   + R+EE
Sbjct: 304 TSAHLDATTAPPRGLAAKGTXPAVDPLDSTSTMS-QPWIVGEEHYDTAQGVKQTLQRYEE 362

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 363 LQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 395


>gi|14717992|gb|AAK72738.1| ATP synthase beta subunit [Caryocar glabrum]
          Length = 381

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 143/286 (50%), Gaps = 21/286 (7%)

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
               GR+ N LG+P+D    LG  D   +  I    P  +        F+TGI+V+D+  
Sbjct: 90  GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKPAPAFIQLDTKFSIFETGIKVVDLLA 146

Query: 157 PLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           P   G +IG+F G+G+GK+     L+++ A++     V   +  ER RE  +   +    
Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINIIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 205

Query: 211 ----GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263
                +N+ +S V  V    +  P  R    LTA+T+AEYF    + +VLL +D+I RF 
Sbjct: 206 GVINEENIAESKVALVYGQMNXPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 265

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V   +  DP
Sbjct: 266 QAGSEVSALLGRMPSAVGYQPTLSTEMGSXQERI--TSTKEGSITSIQAVYVPAADLTDP 323

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
              +  + LD   VL+R LA +G YP VDPL S S +       +E
Sbjct: 324 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSXSPMLQPQIVGEE 369


>gi|328681635|gb|AEB32890.1| ATP synthase beta subunit [Telaranea centipes]
          Length = 350

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 136/264 (51%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G  IG+F G+ +GK+ L+     +       +S+ G  G   RE
Sbjct: 8   FETGIKVVDLLAPYRRGGXIGLFGGAXVGKTVLIXELINNIAKAHGGVSVFGGVGERTRE 67

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF      +V
Sbjct: 68  GNDLYMXMKESKVINEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDV 127

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 128 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 185

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R LA +G YP VDP  S S +  + W   E+  
Sbjct: 186 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHY 244

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 245 ETAQGVKQTLQRYKELQDIIAILG 268


>gi|307265812|ref|ZP_07547363.1| ATP synthase F1, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919207|gb|EFN49430.1| ATP synthase F1, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 506

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 19/339 (5%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117
           +G V+ +  D V +  +G  E++  GD+V   GR    P+     GRV+N LG+PIDG  
Sbjct: 60  VGMVLNLEEDTVGVVVLGDPEKVKEGDIVKRTGRIMEVPAGKEMLGRVVNPLGEPIDG-- 117

Query: 118 SLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
              KG ++ E    I    PP + R+ V+   +TGI  ID   P+  GQR  +      G
Sbjct: 118 ---KGPINYEAKRPIEYPAPPIVRRKSVDTPLQTGILAIDSMIPIGRGQRELIIGDRQTG 174

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESP 228
           K+ +   ++  + D     I   +G++   V      +E Y    ++ + VV +T+ +S 
Sbjct: 175 KTAIAIDTIINQKDKGVYCIYVAIGQKASTVAGIVNMLEKY--GAMEYTTVVASTASDSA 232

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP     + E+F  +G +VL++ D +++ A + R I+      P    YP  VF 
Sbjct: 233 ALQYIAPYAGCAMGEHFMYQGKDVLVVYDDLSKHAIAYRTISLLLRRPPGREAYPGDVFY 292

Query: 289 ELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L   G
Sbjct: 293 LHSRLLERSARLADEYGGGSLTALPIVETLAGDISAYIPTNVISITDGQIYLESELFYSG 352

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             P ++   SVSR+   A     KK+   L   + ++ E
Sbjct: 353 IRPAINVGLSVSRVGGAAQIKAMKKVAGRLRLELSQYRE 391


>gi|254553611|gb|ACT67264.1| ATP synthase CF1 alpha subunit [Joinvillea plicata]
          Length = 507

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 170/369 (46%), Gaps = 12/369 (3%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +
Sbjct: 63  IALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 VASE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
               +     VI   V  G+R   V + +  +  G  ++ ++VV   +D    L+ +AP 
Sbjct: 182 DTILNQKGQNVICVYVAIGQRASSVAQVVTTFQEGGAMEYTIVVAEMADSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
              S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKSSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++       + +F E   ++    +   +D      + +   + 
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LQAFAQFASALDKTSQNQLARGRRLR 418

Query: 415 DFLKQSPSD 423
           + LKQS S+
Sbjct: 419 ELLKQSQSN 427


>gi|326571628|gb|EGE21643.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC7]
          Length = 514

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 164/349 (46%), Gaps = 34/349 (9%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE +SL  G   +  GR    P      GRV++ALG PIDG    
Sbjct: 63  MALNLEQDSVGAVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG---- 118

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG ++ ++  KV    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 -KGPINAKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGER----GREVREFIEDYLGDNLKKSVVVVATSDESPI 229
            L   ++ A+ +   K +   +G++       VR+  E      L  + VVVA++ E   
Sbjct: 178 ALAIDAIIAQKNSGIKCVYVAIGQKRSTIANVVRKLEET---GALAYTTVVVASASEPAA 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF  
Sbjct: 235 LQYIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYL 294

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G  + + G++TA+  +     + +  +  +V SI DG I
Sbjct: 295 HSRLLERASRVNADYVEAFTGGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 354

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L  +L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 355 FLESNLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 403


>gi|223939530|ref|ZP_03631406.1| ATP synthase F1, beta subunit [bacterium Ellin514]
 gi|223891802|gb|EEF58287.1| ATP synthase F1, beta subunit [bacterium Ellin514]
          Length = 483

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 157/322 (48%), Gaps = 32/322 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N  G P+D    + K D    I    PP +++    +   TGI+VID+  P   G
Sbjct: 88  MGRVFNVTGDPVDEQGPV-KADKQYSIHRTAPPLVDQSTSPQVLSTGIKVIDLICPFLKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207
            ++G F G+G+GK+ ++     +       +S+   VGER RE      E IE       
Sbjct: 147 GKVGAFGGAGVGKTVVIMELINNIAKLHGGVSMFAGVGERTREGNDLYNEMIEADVIKVE 206

Query: 208 ------DYLGDN----LKKSV---VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253
                   +G N    LK      +V    +E P  R    L+A+ + EYF   K  +VL
Sbjct: 207 KDEKGHPKIGSNGMPILKPGSRIGLVYGQMNEPPGARLRVALSALAVTEYFRDEKNQDVL 266

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF+ +  E++   G  P A GY  ++ +E+  L ERI  +  +KG+IT+  +V
Sbjct: 267 LFIDNIFRFSQAGSEVSALLGRTPSAVGYQPTLAAEMGNLQERI--TSTKKGSITSFQAV 324

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKL 372
            V  D+  DP   +  + LD  IVL RS+AE G +P VDPLAS SR L  +    +   +
Sbjct: 325 YVPADDLTDPAPATTFAHLDATIVLERSIAELGLFPAVDPLASNSRALTPEIVGQEHYDV 384

Query: 373 VSSLTHLIHRFEETRDIRLIGG 394
              +  ++ R+++ +DI  I G
Sbjct: 385 ARGVQRVLQRYKDLQDIIAILG 406


>gi|196232469|ref|ZP_03131322.1| ATP synthase F1, beta subunit [Chthoniobacter flavus Ellin428]
 gi|196223541|gb|EDY18058.1| ATP synthase F1, beta subunit [Chthoniobacter flavus Ellin428]
          Length = 468

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 18/307 (5%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV N  G P+D    +        I    P  M++       +TGI+VID+  P   G
Sbjct: 90  LGRVFNVTGDPVDERGEVPHTK-RYPIHRAAPTLMDQDVKANILETGIKVIDLICPFTKG 148

Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL------G 211
            ++G F G+G+GK+     L++  A+      V    VGER RE  +   +         
Sbjct: 149 GKVGAFGGAGVGKTVVIMELINNIAKGHGGYSVFAG-VGERTREGNDLYHEMSEAGVINQ 207

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268
            +L KS V  V    +E P  R    L+A+++AEYF   K  +VLL +D++ RF+ +  E
Sbjct: 208 KDLSKSKVALVYGQMNEPPGARLRVALSALSMAEYFRDEKNQDVLLFVDNVFRFSQAGSE 267

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G  P A GY  ++ +E+ +L ERI  +   KG++T+  +V V  D+  DP   + 
Sbjct: 268 VSALLGRTPSAVGYQPTLAAEMGQLQERI--TSTTKGSVTSFQAVYVPADDLTDPAPANT 325

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387
            + LD  IVL RS+AE G YP VDPLAS S+ LA +    +   +   +  ++ R+++ +
Sbjct: 326 FAHLDSTIVLERSIAELGIYPAVDPLASTSKALAPEIVGEEHYAVARGVQRVLQRYKDLQ 385

Query: 388 DIRLIGG 394
           DI  I G
Sbjct: 386 DIIAILG 392


>gi|57652127|ref|YP_186912.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus COL]
 gi|151222221|ref|YP_001333043.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|81170376|sp|Q5HE95|ATPA_STAAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|172048987|sp|A6QIU9|ATPA_STAAE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|57286313|gb|AAW38407.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           COL]
 gi|150375021|dbj|BAF68281.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           str. Newman]
          Length = 502

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ +V + P  GI E    GD V   GR    P      GRV+N LG+PIDG   +    
Sbjct: 70  NVGVVILGPYTGITE----GDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGSAQINAMKKVAGTL 382


>gi|149384619|gb|ABR25132.1| ATP synthase beta chain [Rumohra adiantiformis]
          Length = 426

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  + + +  I    P           F+TGI+V+D   P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSNTTFPIHRPAPAFTQLDTKLLIFETGIKVVDPLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLLGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W    D       +     R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEDHYDTAQGVKQTSQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|301321247|gb|ADK69890.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 459

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 138/257 (53%), Gaps = 9/257 (3%)

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV--IISLVGERGRE 201
           +TGI+ ID F P+  G ++G+F G+G+GK+ L+   +F  ++ +     I    GER RE
Sbjct: 124 ETGIKAIDFFIPIFKGFKLGIFGGAGVGKTVLMKEIIFNVNNKYKNTSNIFIGSGERSRE 183

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259
             E  ++    NL K S + V+  +ESP  R       VT AEY    K ++VLL +D+I
Sbjct: 184 GIELYDELTESNLMKNSTMFVSKMNESPGARMSIVPIGVTAAEYLRDVKKEDVLLFIDNI 243

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
            RF  +  E++   G+ P   GY +++ S++  + +R+   + + G IT+  +V +  D+
Sbjct: 244 YRFIQAENEVSATLGKKPSVGGYQSTLESDVANIQDRL--FKNKNGAITSFQTVFLPMDD 301

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378
            +DP A +V + LD ++VL+R  A +   P  DPLAS S   D+     +    +  +  
Sbjct: 302 LSDPSAVAVFNHLDSNLVLSRDQAAKNILPAFDPLASSSSSVDETLIGKKHFNAIIEVKR 361

Query: 379 LIHRFEETRDIRLIGGY 395
           ++  +++  D+ LI G+
Sbjct: 362 ILKAYKDLEDVILILGF 378


>gi|163814611|ref|ZP_02206000.1| hypothetical protein COPEUT_00762 [Coprococcus eutactus ATCC 27759]
 gi|158450246|gb|EDP27241.1| hypothetical protein COPEUT_00762 [Coprococcus eutactus ATCC 27759]
          Length = 500

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 144/291 (49%), Gaps = 6/291 (2%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            + GR+++ALG PIDG  S+   D    I +  P  ++R+ V +  +TGI  ID   P+ 
Sbjct: 103 AFVGRIVDALGAPIDGKGSIETTDYR-PIENPAPSIVDRKSVNQPLQTGILSIDAMFPIG 161

Query: 160 HGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKK 216
            GQR  +      GK+++ +         D + + + +G++   + + + +    D +  
Sbjct: 162 RGQRELIIGDRQTGKTSIAIDTILNQKGKDVICVYVAIGQKASTIAKVVNNLNKYDAMDY 221

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV +T+ +S  L+ +AP +   IAEYF  KG +VL++ D +++ A + R ++   G  
Sbjct: 222 TIVVASTASDSAPLQYIAPYSGTAIAEYFMHKGKDVLIVYDDLSKHAVAYRTLSLLLGRS 281

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER    + E   G+ITA+  +     + +  I  +V SI DG
Sbjct: 282 PGREAYPGDVFYLHSRLLERSSKLKDELGGGSITALPIIETQAGDVSAYIPTNVISITDG 341

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            I L   L   G  P V+   SVSR+   A +   KK   S+   + ++ E
Sbjct: 342 QIFLESDLFFSGMRPAVNVGLSVSRVGGAAQTKAMKKAAGSIRIDLAQYRE 392


>gi|24376221|ref|NP_720265.1| F0F1 ATP synthase subunit alpha [Shewanella oneidensis MR-1]
 gi|81588953|sp|Q8E8B8|ATPA_SHEON RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|24351281|gb|AAN57708.1|AE015907_6 ATP synthase F1, alpha subunit [Shewanella oneidensis MR-1]
          Length = 513

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG  ++     S +E+++  P  + R+ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGAIDNDGFSPVEVIA--PGVIERKSVDQPVQTGYKAVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ +   ++  + D   K +   VG++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ E+  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASEAAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G    + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERASRVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|55056908|emb|CAF21955.1| ATP synthase beta subunit [Afrocarpus gracilior]
          Length = 318

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 15/255 (5%)

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+       +     V + S VGER RE  +   + 
Sbjct: 1   DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEM 60

Query: 210 LGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
               +         K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I 
Sbjct: 61  KESGVIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIF 120

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+ 
Sbjct: 121 RFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDL 178

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379
            DP   +  + LD   VL+R LA +G YP VDPL S S +   +   +E  +    +   
Sbjct: 179 TDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQT 238

Query: 380 IHRFEETRDIRLIGG 394
           + R++E +DI  I G
Sbjct: 239 LQRYKELQDIIAILG 253


>gi|42561147|ref|NP_975598.1| F0F1 ATP synthase subunit beta [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|331703602|ref|YP_004400289.1| ATP synthase beta chain [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|42492645|emb|CAE77240.1| ATP synthase beta chain [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|256384274|gb|ACU78844.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256385107|gb|ACU79676.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455378|gb|ADH21613.1| ATP synthase F1, beta subunit [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|328802157|emb|CBW54311.1| ATP synthase beta chain [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 459

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 164/328 (50%), Gaps = 18/328 (5%)

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           ++ISL D + +  + F +   +     + +  G  ++      K D   E +       N
Sbjct: 58  KQISLSDEIINTNKSFMVPVGSKAKNNIFSFTGISLNN-----KKDDKQEYVEMNSTINN 112

Query: 138 RQRVEKGFK---TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-- 190
           ++ +   F+   TGI+ ID F P+  G ++G+F G+G+GK+ L+   +F  ++ +     
Sbjct: 113 KRELSTEFELIETGIKAIDFFIPIFKGFKLGIFGGAGVGKTVLMKEIIFNVNNKYKNTSN 172

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           I    GER RE  E  ++    NL K S + V+  +ESP  R       VT AEY    K
Sbjct: 173 IFIGSGERSREGIELYDELTESNLMKNSTMFVSKMNESPGARMSIVPIGVTAAEYLRDVK 232

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
            ++VLL +D+I RF  +  E++   G+ P   GY +++ S++  + +R+   + + G IT
Sbjct: 233 KEDVLLFIDNIYRFIQAENEVSATLGKKPSVGGYQSTLESDVANIQDRL--FKNKNGAIT 290

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +  +V +  D+ +DP A +V + LD ++VL+R  A +   P  DPLAS S   D+     
Sbjct: 291 SFQTVFLPMDDLSDPSAVAVFNHLDSNLVLSRDQAAKNILPAFDPLASSSSSVDETLIGK 350

Query: 369 EK-KLVSSLTHLIHRFEETRDIRLIGGY 395
           +    +  +  ++  +++  D+ LI G+
Sbjct: 351 KHFNAIIEVKRILKAYKDLEDVILILGF 378


>gi|319407768|emb|CBI81415.1| ATP synthase alpha chain [Bartonella sp. 1-1C]
          Length = 511

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 19/343 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V I   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMALNLETDNVGIVIFGSDRDIREGDTVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-L 177
           + K +    +  K P  + RQ V +   TG++VID   P+  GQR  V      GK+  L
Sbjct: 121 I-KANERRRVDVKAPGIIPRQSVHEPMSTGLKVIDALIPIGRGQRELVIGDRQTGKTAIL 179

Query: 178 LSMFARSDCF---------DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVATS 224
           L  F     F         DKV  I   +G++   V +F++  +  G  L  S++V AT+
Sbjct: 180 LDTFLNQKHFHDNDTEEDQDKVYCIYVAIGQKRSTVAQFVKVLEERG-ALDYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP 
Sbjct: 239 SDPAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     ++   G++TA+  +    ++ +  I  +V SI DG I L  +L
Sbjct: 299 DVFYLHSRLLERAAKLNADYGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 359 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 401


>gi|295707210|ref|YP_003600285.1| ATP synthase F1 subunit alpha [Bacillus megaterium DSM 319]
 gi|294804869|gb|ADF41935.1| ATP synthase F1, alpha subunit [Bacillus megaterium DSM 319]
          Length = 502

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 149/319 (46%), Gaps = 14/319 (4%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P     EI  GD V   GR    P      GRV+N+LG+P+DG   LG  + 
Sbjct: 70  NVGIIILGPY---TEIREGDEVRRTGRIMEVPVGEQLIGRVVNSLGQPVDG---LGPVET 123

Query: 125 SME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
           +    I    P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++
Sbjct: 124 TKTRPIEGAAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTI 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V
Sbjct: 184 LNQKDQDMVCIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGV 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+ E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER   
Sbjct: 244 TMGEEFMYNGKHVLVIYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
               K  G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SV
Sbjct: 304 LSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSV 363

Query: 358 SRLADKAWSADEKKLVSSL 376
           SR+   A     KK+  +L
Sbjct: 364 SRVGGSAQIKAMKKVAGTL 382


>gi|257883978|ref|ZP_05663631.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,501]
 gi|257819816|gb|EEV46964.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,501]
          Length = 593

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ SLA
Sbjct: 361 RLAEYYERSGRVIALGSEAREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 478


>gi|68075301|ref|XP_679568.1| vacuolar ATP synthase subunit b [Plasmodium berghei strain ANKA]
 gi|56500347|emb|CAI04729.1| vacuolar ATP synthase subunit b, putative [Plasmodium berghei]
          Length = 493

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 29/279 (10%)

Query: 103 GRVINALGKPID------GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
           GRV N  GKPID       DD L      +    +V P M         +TGI  ID+  
Sbjct: 114 GRVFNGSGKPIDKGPNILADDYLDINGNPINPQCRVYPEM--------IQTGISTIDVMN 165

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDK------VIISLVGERGREVR 203
            +  GQ+I +F+ +G+  + + +   R        D  D       VI   +G      R
Sbjct: 166 SIVRGQKIPLFSAAGLPHNEIGAQICRQASLVQGKDVLDHSDENFAVIFGAMGVNMETAR 225

Query: 204 EFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITR 261
            F +D+  +  +++  + +  +++  I R + P  A+T AEY +  K  +V +IL  ++ 
Sbjct: 226 YFRQDFEENGKMERVCLFLNLANDPTIERILTPRIALTTAEYLAFEKEMHVFVILTDMSS 285

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A ++RE+++   E+P  RGYP  ++S+L  + ER G  E   G+IT    + +  D+  
Sbjct: 286 YADALREVSSAREEVPGRRGYPGYMYSDLSTIYERAGRVEGRNGSITQFPILTMPNDDIT 345

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            PI D    I +G I ++R+L     YPP++ L S+SRL
Sbjct: 346 HPIPDLTGYITEGQIFVDRNLYNRQIYPPINVLPSLSRL 384


>gi|294501862|ref|YP_003565562.1| ATP synthase F1 subunit alpha [Bacillus megaterium QM B1551]
 gi|114510|sp|P17674|ATPA_BACMQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|142559|gb|AAA82524.1| ATP synthase alpha subunit [Bacillus megaterium]
 gi|294351799|gb|ADE72128.1| ATP synthase F1, alpha subunit [Bacillus megaterium QM B1551]
          Length = 502

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 149/319 (46%), Gaps = 14/319 (4%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P     EI  GD V   GR    P      GRV+N+LG+P+DG   LG  + 
Sbjct: 70  NVGIIILGPY---TEIREGDEVRRTGRIMEVPVGEQLIGRVVNSLGQPVDG---LGPVET 123

Query: 125 SME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
           +    I    P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++
Sbjct: 124 TKTRPIEGAAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTI 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V
Sbjct: 184 LNQKDQDMVCIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGV 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+ E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER   
Sbjct: 244 TMGEEFMYNGKHVLVIYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
               K  G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SV
Sbjct: 304 LSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSV 363

Query: 358 SRLADKAWSADEKKLVSSL 376
           SR+   A     KK+  +L
Sbjct: 364 SRVGGSAQIKAMKKVAGTL 382


>gi|326566567|gb|EGE16713.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 12P80B1]
 gi|326577726|gb|EGE27602.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis O35E]
          Length = 514

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 164/349 (46%), Gaps = 34/349 (9%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE +SL  G   +  GR    P      GRV++ALG PIDG    
Sbjct: 63  MALNLEQDSVGAVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG---- 118

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG ++ ++  KV    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 -KGPINAKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGER----GREVREFIEDYLGDNLKKSVVVVATSDESPI 229
            L   ++ A+ +   K +   +G++       VR+  E      L  + VVVA++ E   
Sbjct: 178 ALAIDAIIAQKNSGIKCVYVAIGQKRSTIANVVRKLEET---GALAYTTVVVASASEPAA 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF  
Sbjct: 235 LQYIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYL 294

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G  + + G++TA+  +     + +  +  +V SI DG I
Sbjct: 295 HSRLLERASRVNADYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 354

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L  +L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 355 FLESNLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 403


>gi|314934174|ref|ZP_07841535.1| ATP synthase F1, alpha subunit [Staphylococcus caprae C87]
 gi|313653079|gb|EFS16840.1| ATP synthase F1, alpha subunit [Staphylococcus caprae C87]
          Length = 503

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     +IS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---NDISEGDEVKRTGRIMEVPVGDELIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+  
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 186 QKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DELGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK   +L   +  + E       G
Sbjct: 366 VGGSAQIKAMKKEAGTLRLDLASYRELESFAQFG 399


>gi|58268340|ref|XP_571326.1| ATP synthase alpha chain, mitochondrial precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|134113074|ref|XP_774813.1| hypothetical protein CNBF2430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257459|gb|EAL20166.1| hypothetical protein CNBF2430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227561|gb|AAW44019.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 540

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 158/340 (46%), Gaps = 15/340 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G    I  GD V   G+    P      GRV++ALG PIDG   
Sbjct: 92  GMCLNLEADNVGVTIFGNDRLIKEGDTVKRTGQIVDVPVGPGLLGRVVDALGNPIDGKGP 151

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           + K D   +   K P  + R+ V +  +TG++ +D   P+  GQR  +      GKS   
Sbjct: 152 I-KADGRTKAQLKAPGILPRRSVHEPMQTGLKSVDSLVPIGRGQRELIIGDRQTGKSALA 210

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDES 227
             T+L+    +D  D+      +   VG++   V + ++     D +K +++V AT+ E+
Sbjct: 211 VDTILNQKKWNDGADESKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYTIIVAATASEA 270

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 271 APLQYLAPFSGCAMGEWFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 330

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +   G + +  I  +V SI DG I L   L  +
Sbjct: 331 YLHSRLLERAAKMNADYGAGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFK 390

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A +   K +  SL   + ++ E
Sbjct: 391 GVRPAINVGLSVSRVGSAAQTKLMKSVAGSLKLYLAQYRE 430


>gi|289065074|ref|YP_003433960.1| ATP synthase CF1 alpha subunit [Typha latifolia]
 gi|281371757|gb|ADA63684.1| ATP synthase CF1 alpha subunit [Typha latifolia]
          Length = 507

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 10/371 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSDAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISSSE-SRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AE+F  +G + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEHFMYRGKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++       + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LEAFAQFASDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPS 422
            + + LKQS S
Sbjct: 416 RLRELLKQSQS 426


>gi|261417220|ref|YP_003250903.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261373676|gb|ACX76421.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302326342|gb|ADL25543.1| V-type ATPase, B subunit [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 433

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 174/342 (50%), Gaps = 18/342 (5%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
           +L +VIRI+ D+V +        IS    V   G   ++  S    GRV N  GKP D  
Sbjct: 39  SLARVIRIDGDLVDLQVFAGARGISTDSEVRFLGEPMKVPYSEALLGRVFNGAGKPRDNG 98

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +    +++   S V PA  R   +   +TGI +ID+F  L   Q++ +F+ +G   + 
Sbjct: 99  PEVDGERITIGGPS-VNPA-KRIIPKTMVRTGIPMIDVFNTLVVSQKLPIFSIAGEPYNE 156

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
           LL+  A     D +I+  +G +  +   +++DYL  N  L ++V+ + T+ +  +   + 
Sbjct: 157 LLARIALQAEVDVIILGGMGLKHDDYL-YLKDYLEKNGALSRTVMFMHTASDPIVECLLV 215

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P  ++ +AE F+++G NVL++L  +T FA +++EIA    ++P  RGYP  ++S+L    
Sbjct: 216 PDASLAVAEKFATEGKNVLVLLTDMTNFADAMKEIAITMEQIPSNRGYPGDLYSQLASRY 275

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           E+      + G+IT +    + GD+   P+ D+   I +G   L +     GR   ++P 
Sbjct: 276 EK-AVDFSDAGSITILAVTTMPGDDVTHPVPDNTGYITEGQFYLRK-----GR---IEPF 326

Query: 355 ASVSRLADKA---WSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            S+SRL  +      +D + +++++  L   ++ET + + +G
Sbjct: 327 GSLSRLKQQVNGKTRSDHRTIMNTMIQLYASYKETLEKQSMG 368


>gi|160943202|ref|ZP_02090438.1| hypothetical protein FAEPRAM212_00688 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445441|gb|EDP22444.1| hypothetical protein FAEPRAM212_00688 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105218|emb|CBL02762.1| proton translocating ATP synthase, F1 alpha subunit
           [Faecalibacterium prausnitzii SL3/3]
          Length = 584

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 150/318 (47%), Gaps = 15/318 (4%)

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKV 132
            E + +G +V   G R  I     + GRVI+ LG+PIDG     KG +  E    I  + 
Sbjct: 158 AETVGVGTMVTRSGKRAGIPVGDAFLGRVISPLGEPIDG-----KGPIEAEGYNPIEKQA 212

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV 190
           P  + RQ V+    TGI  ID   P+  GQR  +      GK+++ +  +  + D     
Sbjct: 213 PSILERQSVDTPLHTGILAIDSMFPIGRGQRELIIGDRQTGKTSIATDAILNQKDKDVLC 272

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   +    ED      +  + +V AT+ +S  L+ +AP     +AEYF +KG
Sbjct: 273 IYVAIGQKASSIARVAEDLKKHGAMSYTTIVAATASDSAPLQYIAPYAGTALAEYFMAKG 332

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G+I
Sbjct: 333 KSVLIVYDDLSKHAVAYRAISLLLRRSPGREAYPGDVFYLHSRLLERSCRMRDDLGGGSI 392

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  V     + +  I  +V SI DG I L  +L   G  P V+   SVSR+   A + 
Sbjct: 393 TALPIVETQAGDVSAYIPTNVISITDGQIFLESALFNAGNRPAVNVGLSVSRVGGAAQTK 452

Query: 368 DEKKLVSSLTHLIHRFEE 385
             KK  ++L   + +++E
Sbjct: 453 AMKKANANLRIELAQYKE 470


>gi|290745930|gb|ADD51632.1| ATP synthase beta chain [Terpsichore sp. MAS-2010b]
          Length = 421

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 73  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 130

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 131 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 190

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 191 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 250

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A G   ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 251 VSALLGRMPSAVGDQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 308

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + L    VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 309 SAHLYATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 367

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 368 QDIIAILG 375


>gi|154424941|emb|CAL18573.1| ATP synthase alpha subunit [Streptococcus gordonii]
          Length = 366

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 10/346 (2%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ +V +   +D+ G    +  + V I  +G   +I  GD +   G+    P      GR
Sbjct: 10  GELLVFE---NDSYGMAQNLESNDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGR 66

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+  GQR 
Sbjct: 67  VVDPLGRPVDGLGDIAT-DKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRE 125

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKKSVVVV 221
            +      GK+T+ +         D + I + +G++   VR  +E       L  ++VV 
Sbjct: 126 LIIGDRQTGKTTIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVT 185

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P    
Sbjct: 186 ASASQPSPLLYLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREA 245

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I L+
Sbjct: 246 FPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLS 305

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SL   G  P +D  +SVSR+   A     KK+  +L   +  + E
Sbjct: 306 DSLFNAGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRE 351


>gi|320536309|ref|ZP_08036352.1| putative V-type sodium ATPase, B subunit [Treponema phagedenis
           F0421]
 gi|320146869|gb|EFW38442.1| putative V-type sodium ATPase, B subunit [Treponema phagedenis
           F0421]
          Length = 431

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 178/370 (48%), Gaps = 12/370 (3%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           I SIT    TV   ++ V  G+    +     +L +V +++ DIV +     G  +S GD
Sbjct: 8   IESITGSVITVK--AEGVHYGELAQVKTVFGTSLAEVNKLDGDIVSLQVFAGGRGVSTGD 65

Query: 86  LVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
            V   GR  ++S S    GR+ N  G+P D   +L   D  +E+         R    + 
Sbjct: 66  EVRFLGRQMQVSFSHDLLGRIFNGSGEPRDRGPALH--DNPVELGGPSVNPTKRIMARRM 123

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
            +TGI +ID+F  L   Q++ +F+ SG   + LL+  A     D +++  +G +  +   
Sbjct: 124 IRTGIPMIDMFNTLVVSQKLPIFSISGEPYNELLARIAMQAEVDVIVLGGMGLKYDDYLY 183

Query: 205 FIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           F E      +L ++V+ V T+ +  +   M P   +++AE F+ +G +VL++L  +T FA
Sbjct: 184 FKETLEEAGSLSRTVMFVHTAADPTVECLMIPDMCLSVAEQFALEGKDVLVLLTDMTNFA 243

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            S++EIA    ++P  RGYP  ++S+L    E+      + G+IT +    + GD+   P
Sbjct: 244 DSMKEIAIIQEQVPSNRGYPGDLYSQLAARYEK-AVEFDDAGSITVLAVTTMPGDDVTHP 302

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           + D+   I +G   L     + GR  P   L+ + +  +     D + L+ ++  L   F
Sbjct: 303 VPDNTGYITEGQFYL-----KNGRIEPFGSLSRLKQNVNGKTRDDHRALMDNMIKLYASF 357

Query: 384 EETRDIRLIG 393
           ++T + + +G
Sbjct: 358 KDTLEKKSMG 367


>gi|69214354|gb|AAZ03785.1| ATP synthase alpha chain [Typha latifolia]
          Length = 506

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 10/371 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSDAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISSSE-SRLIESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AE+F  +G + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEHFMYRGKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++       + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LEAFAQFASDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPS 422
            + + LKQS S
Sbjct: 416 RLRELLKQSQS 426


>gi|326328136|gb|ADZ54135.1| ATP synthase beta subunit [Bradyrhizobium sp. CCBAU 15768]
          Length = 229

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 17/215 (7%)

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGDN 213
           G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +  +
Sbjct: 2   GGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESKVNAD 61

Query: 214 --------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
                     K  +V    +E P  R    LT +TIAE F  KG +VL  +D+I RF  +
Sbjct: 62  PHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQA 121

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 122 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADDLTDPAP 179

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD    L+RS+AE+G YP VDPL S SR+
Sbjct: 180 ATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRM 214


>gi|260946940|ref|XP_002617767.1| ATP synthase alpha chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
 gi|238847639|gb|EEQ37103.1| ATP synthase alpha chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
          Length = 447

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 14/296 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ LG PIDG   L     + +   K P  + R+ V +  +TG++ +D   P+  GQ
Sbjct: 44  GRVVDGLGNPIDGKGPL-NASATAKAEVKAPGILPRRSVHEPMQTGLKSVDALVPIGRGQ 102

Query: 163 RIGVFAGSGIGKS-----TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDY-LG 211
           R  +      GK+     T+L+    +D  D+      +   VG++   V + ++     
Sbjct: 103 RELIIGDRQTGKTAVALDTILNQKRWNDGNDEKKKLYCVYVAVGQKRSTVAQLVKTLEAN 162

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D LK S++V AT+ E+  L+ +AP TA +I E+F   G + L+I D +++ A + R+++ 
Sbjct: 163 DALKYSIIVAATASEAAPLQYLAPFTACSIGEWFRDNGRHALIIYDDLSKQAVAYRQLSL 222

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVR 329
                P    YP  VF    RLLER     +    G++TA+  +   G + +  I  +V 
Sbjct: 223 LLRRPPGREAYPGDVFYLHSRLLERAAKMSEANGAGSLTALPIIETQGGDVSAYIPTNVI 282

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           SI DG I L   L  +G  P ++   SVSR+   A     K++  SL   + ++ E
Sbjct: 283 SITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE 338


>gi|296112607|ref|YP_003626545.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis RH4]
 gi|295920301|gb|ADG60652.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis RH4]
 gi|326560867|gb|EGE11232.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 7169]
 gi|326563895|gb|EGE14146.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 46P47B1]
 gi|326566904|gb|EGE17043.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 103P14B1]
 gi|326569766|gb|EGE19816.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC8]
 gi|326570797|gb|EGE20822.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC1]
 gi|326575093|gb|EGE25021.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis CO72]
 gi|326576821|gb|EGE26728.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 101P30B1]
          Length = 514

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 164/349 (46%), Gaps = 34/349 (9%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE +SL  G   +  GR    P      GRV++ALG PIDG    
Sbjct: 63  MALNLEQDSVGAVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG---- 118

Query: 120 GKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG ++ ++  KV    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 -KGPINAKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGER----GREVREFIEDYLGDNLKKSVVVVATSDESPI 229
            L   ++ A+ +   K +   +G++       VR+  E      L  + VVVA++ E   
Sbjct: 178 ALAIDAIIAQKNSGIKCVYVAIGQKRSTIANVVRKLEET---GALAYTTVVVASASEPAA 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF  
Sbjct: 235 LQYIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYL 294

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G  + + G++TA+  +     + +  +  +V SI DG I
Sbjct: 295 HSRLLERASRVNADYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 354

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L  +L   G  P V+   SVSR+   A +   KKL   +   + ++ E
Sbjct: 355 FLESNLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 403


>gi|46360732|gb|AAS89147.1| ATP synthase beta subunit [Xenothallus vulcanicola]
          Length = 382

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 147/300 (49%), Gaps = 18/300 (6%)

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +  G  +  I    P  +        F+TGI+V+D+  P   G +IG+F 
Sbjct: 9   LGEPVDNLGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFG 67

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GDNLKKSVV 219
           G+G+GK+ L+     +       +S+ G  G   RE  + Y+           N+ +S V
Sbjct: 68  GAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKV 127

Query: 220 --VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
             V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 128 ALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRM 187

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   
Sbjct: 188 PSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATT 245

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIRLIGG 394
           VL+R LA +G YP VD L S   +    W   E+       +   + R++E +DI  I G
Sbjct: 246 VLSRGLAAKGIYPAVDLLDSTXTML-XPWIVGEEHYENXQGVKQTLQRYKELQDIIAILG 304


>gi|300853449|ref|YP_003778433.1| F1Fo ATPase subunit alpha [Clostridium ljungdahlii DSM 13528]
 gi|300433564|gb|ADK13331.1| F1Fo ATPase, subunit alpha [Clostridium ljungdahlii DSM 13528]
          Length = 504

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 7/336 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +D  G  + +  D V    +G  + I  GD V   GR    P      GRV+N+LG+PID
Sbjct: 57  NDVYGMALNLEQDNVGCVLLGSQKGIKEGDTVKRTGRVVEVPVGEAIVGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  +    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTSETRPVDLVAPGVITRQSVKEPLQTGLKAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
           + + +         D + I + +G++   V   + D      +  S++V A++ ES  L+
Sbjct: 176 TAIAMDTIINQKGKDVICIYVAIGQKQSTVAHIVNDLTEAGAMDYSIIVSASASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF +KG +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFMNKGKDVLIVYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER    S+K   G++TA+  +     +    I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLSDKLGGGSLTALPIIETMAGDVTAYIPTNVISITDGQIFLESELFYAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A     K++  +L   + ++ E
Sbjct: 356 AINAGISVSRVGGNAQIKAMKQVAGTLRLDLAQYRE 391


>gi|164688906|ref|ZP_02212934.1| hypothetical protein CLOBAR_02554 [Clostridium bartlettii DSM
           16795]
 gi|164602110|gb|EDQ95575.1| hypothetical protein CLOBAR_02554 [Clostridium bartlettii DSM
           16795]
          Length = 500

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 168/378 (44%), Gaps = 13/378 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  D+V     G    I  GD+V   GR    P      GRV++ LG PIDG  
Sbjct: 60  FGMALNLEEDVVGAVLFGDDSGIKEGDIVKRTGRIVEVPVGEAMIGRVVSPLGLPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   + +  + S  P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+++
Sbjct: 120 PINT-NKTRPVESPAPGIMARRSVYEPLQTGIKSIDSMIPIGRGQRELIIGDRQTGKTSI 178

Query: 178 -LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMA 234
            +         D + I + +G++   V + +     G  +  ++VV AT+ ES  L+ +A
Sbjct: 179 AIDTILNQKGKDVICIYVAIGQKRSTVAQLVSRLENGGAMDYTIVVSATASESAPLQYLA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLL
Sbjct: 239 PYAGAAMGEEFMYNGKHVLIIYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P VD
Sbjct: 299 ERAAKLSDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIYLQPELFYSGVRPAVD 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           P  SVSR+   A     KK+  +L     ++ E       G     +D    + + Q   
Sbjct: 359 PGISVSRVGGSAQIKSMKKVSGTLKLAYSQYRELASFSQFGS---DLDADTKRRLAQGER 415

Query: 413 IYDFLKQ---SPSDLSSE 427
           I + LKQ   +P D+S +
Sbjct: 416 IVEVLKQGENAPLDVSDQ 433


>gi|124112037|ref|YP_001019097.1| CF1 alpha subunit of ATP synthase [Chlorokybus atmophyticus]
 gi|190358290|sp|Q19VA5|ATPA_CHLAT RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|124012153|gb|ABD62169.2| CF1 alpha subunit of ATP synthase [Chlorokybus atmophyticus]
          Length = 506

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE +++  G  V   G+  +I     + GRV+NAL +PIDG   +
Sbjct: 63  IALNLESNNVGAVMMGEGLTIQEGSSVKATGKIAQIPVGEAYVGRVVNALARPIDGKGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + + S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 PTSEYRL-LESPAPGIISRRSVYEPLQTGLVAIDAMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPL 236
               +     VI   V  G++   V + +         +  +VVA +  +P  L+ +AP 
Sbjct: 182 DTILNQKGQNVICVYVAIGQKASSVAQVVNTLEERGAMEYTIVVAENANAPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T  T+AEYF  KG + L+I D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 242 TGATLAEYFMYKGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKLSTALGEGSMTALPVVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGLRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A     K++   L   + +F E
Sbjct: 362 ISVSRVGSAAQVKAMKQVAGKLKLELAQFAE 392


>gi|71909721|ref|YP_287308.1| ATP synthase F1, alpha subunit [Dechloromonas aromatica RCB]
 gi|115312243|sp|Q477Z3|ATPA_DECAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71849342|gb|AAZ48838.1| ATP synthase F1 subcomplex alpha subunit [Dechloromonas aromatica
           RCB]
          Length = 512

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 201/452 (44%), Gaps = 37/452 (8%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL     V   G + S+T     V  L Q V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSKIQNLQGASEVRTQGTVVSVTDGICRVHGL-QDVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR    P      GRV+N+LG+PID
Sbjct: 58  -NTFGMALNLERDSVGAVVLGEYEHISEGDIVKTTGRILEVPVGPELLGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + RQ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-NAKLTDKIEKVAPGVIWRQSVSQPVQTGLKCVDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPI 229
           + +   ++  +       +   +G++   +   +   E++    ++ ++VV A + ES  
Sbjct: 176 TAVAVDAIINQKGKGLFCVYVAIGQKASTIANVVRKLEEH--GAMEYTIVVAAPASESAA 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP    T+ EYF   G++ L+I D +T+ A   R+++      P    YP  VF  
Sbjct: 234 LQYLAPYAGCTMGEYFRDTGEDALIIYDDLTKQAWGYRQVSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER              G  + + G++TA+  +     + +  +  +V SI DG I
Sbjct: 294 HSRLLERAARVSAAWVEKLSNGAIKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQI 353

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L   L   G  P ++   SVSR+   A +   KKL   +   + ++   R++     + 
Sbjct: 354 FLETDLFNAGIRPAINAGISVSRVGGAAQTKLIKKLGGGVRLALAQY---RELAAFAQFA 410

Query: 397 PGVDLILDKAVHQVPIIYDFLKQ---SPSDLS 425
             +D    K + +  ++ + +KQ   SP  +S
Sbjct: 411 SDLDEATRKQLERGRLVTELMKQPQYSPMSIS 442


>gi|317968982|ref|ZP_07970372.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CB0205]
          Length = 505

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 152/339 (44%), Gaps = 26/339 (7%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDG 115
           DN+G V+           +G G  I  G  V   G+    P      GRV+N LG+ IDG
Sbjct: 70  DNVGAVL-----------MGEGRGIQEGSTVKATGKIASVPVGDAMLGRVVNPLGQAIDG 118

Query: 116 DDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
                KGD+       I S  P  + R+ V +  +TGI  ID   P+  GQR  +     
Sbjct: 119 -----KGDIPTSETRLIESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQ 173

Query: 172 IGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228
            GK+ + +         D V + + VG++   V   +E       L  +V+V A + ES 
Sbjct: 174 TGKTAIAIDTIINQKGEDVVCVYVAVGQKAASVANVVEVLREKGALDYTVIVAANASESA 233

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP T   IAE F  KG   L+I D +T+ A + R+++      P    YP  VF 
Sbjct: 234 ALQYLAPYTGAAIAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFY 293

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER         KG++TA+  +     + +  I  +V SI DG + L+  L   G
Sbjct: 294 CHSRLLERAAKLSDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSG 353

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             P ++   SVSR+   A +   KK+  +L   + +F+E
Sbjct: 354 LRPAINVGISVSRVGGAAQTKAIKKIAGTLKLELAQFDE 392


>gi|255073025|ref|XP_002500187.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
 gi|226515449|gb|ACO61445.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
          Length = 497

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 169/367 (46%), Gaps = 36/367 (9%)

Query: 33  YYTVTCLSQYVCLGDFV----------VHQGKNSDNLGQVIRINLD--IVYICPVGIGEE 80
           Y TVT +S  + + D V          +  G  S   GQV+ ++ +  +V +     G +
Sbjct: 29  YRTVTGVSGPLVILDKVKSAQYAEIVNIRLGDGSMRRGQVLEVDGERAVVQVFEGTSGVD 88

Query: 81  ISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                L F     +   S    GR+ N  G+PIDG   +   ++ ++I         R  
Sbjct: 89  GRNTKLEFTGEVLKTPVSEDMLGRIFNGSGQPIDGGPPV-MPEVYLDIQGSSINPSERTY 147

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----------- 189
            E+  +TGI  ID+   +  GQ+I +F+ +G+  + + +   R     K           
Sbjct: 148 PEEMIQTGIGTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKQPDAKNDLIKL 207

Query: 190 ----------VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
                     ++ + +G        F  D+  + +L+K V+ +  +++  I R + P  A
Sbjct: 208 DEPGRDDEFCIVFAAMGVNLETANFFRRDFESNGSLEKVVLFLNLANDPTIERIITPRIA 267

Query: 239 VTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T AEY + + G +VL+IL  ++ +A ++RE++    E+P  RGYP  ++++L  + ER 
Sbjct: 268 LTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERA 327

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E  KG+IT +  + +  D+   PI D    I +G I ++R L     YPP++ L S+
Sbjct: 328 GRIEGRKGSITQLPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSL 387

Query: 358 SRLADKA 364
           SRL   A
Sbjct: 388 SRLMKSA 394


>gi|313904981|ref|ZP_07838352.1| H(+)-transporting two-sector ATPase [Eubacterium cellulosolvens 6]
 gi|313470238|gb|EFR65569.1| H(+)-transporting two-sector ATPase [Eubacterium cellulosolvens 6]
          Length = 588

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 132/265 (49%), Gaps = 20/265 (7%)

Query: 121 KGDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           KGD+ + ++ K P    R   EK        TG RV+D F P+  G    +    G GK+
Sbjct: 180 KGDVDLTMLQKWPVRKGRPYAEKLPPDEPLVTGQRVVDAFFPIAKGGVAAIPGPFGSGKT 239

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESP 228
                 A+    D V+    GERG E+ + + ++        G++L K  V++A + + P
Sbjct: 240 VTQHQLAKWADADIVVYIGCGERGNEMTDVLNEFPELKDPRTGESLMKRTVLIANTSDMP 299

Query: 229 ILRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           +  + A + T +TIAEYF   G +V L+ DS +R+A ++RE++    E+P   GYP  + 
Sbjct: 300 VAAREASIYTGITIAEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGEEGYPAYLG 359

Query: 288 SELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           S L +  ER G       EK +G ++A+ +V   G + ++P++ +   I+     L+ SL
Sbjct: 360 SRLAQFYERAGRVISLGHEKREGALSAIGAVSPPGGDISEPVSQATLRIVKVFWALDASL 419

Query: 343 AEEGRYPPVDPLASVSRLAD--KAW 365
           A +  +P ++ L S S   D  K W
Sbjct: 420 AYQRHFPAINWLTSYSLYLDTLKQW 444


>gi|157285039|gb|ABV31259.1| ATPase [Vibrio fluvialis]
 gi|157285041|gb|ABV31260.1| ATPase [Vibrio fluvialis]
 gi|157285243|gb|ABV31361.1| ATPase [Vibrio fluvialis]
          Length = 441

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 30/325 (9%)

Query: 84  GDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNR 138
           G+ V   GR    P      GRV+N LG+PIDG     KG L+  + S V    P  ++R
Sbjct: 49  GEKVTGTGRILEVPVGPELLGRVVNTLGEPIDG-----KGPLNATLTSPVEVIAPGVIDR 103

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVG 196
           Q V++  +TG + +D   P+  GQR  +      GK+ +   ++  + D     I   +G
Sbjct: 104 QSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIG 163

Query: 197 ERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           ++   +   +   E++    LK ++VVVA++ ES  L+ +AP     + EYF  +G++ L
Sbjct: 164 QKASTIANVVRKLEEH--GALKNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDAL 221

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI-------------GPS 300
           ++ D +++ A + R+I+      P    +P  VF    RLLER              G  
Sbjct: 222 IVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGEV 281

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           + + G++TA+  +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+
Sbjct: 282 KGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRV 341

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEE 385
              A +   KKL   +   +  + E
Sbjct: 342 GGSAQTKIIKKLSGGIRTALAAYRE 366


>gi|42558416|gb|AAS19917.1| ATP synthase beta chain [Terpsichore pichinchae]
          Length = 422

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 20/308 (6%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160
            GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   
Sbjct: 74  LGRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 131

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211
           G +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+          
Sbjct: 132 GGKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINE 191

Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
            N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 192 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 251

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A G   ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 252 VSALLGRMPSAVGDQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 309

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386
            + L    VL+R LA +G YP VDPL S S +  + W   E+  +    +   + R++E 
Sbjct: 310 SAHLYATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 368

Query: 387 RDIRLIGG 394
           +DI  I G
Sbjct: 369 QDIIAILG 376


>gi|323271484|gb|EGA54905.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 241

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 3/145 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+  G+P+DG +         + M   PPAM RQ + +   TGIR ID       GQ
Sbjct: 99  GRVIDGFGRPLDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQ 156

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
           R+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +   K+ V+VV
Sbjct: 157 RVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVV 216

Query: 222 ATSDESPILRKMAPLTAVTIAEYFS 246
           ATSD   + R  A   A TIAE+FS
Sbjct: 217 ATSDRPALERVRALFVATTIAEFFS 241


>gi|321261802|ref|XP_003195620.1| vacuolar ATP synthase [Cryptococcus gattii WM276]
 gi|317462094|gb|ADV23833.1| vacuolar ATP synthase, putative [Cryptococcus gattii WM276]
          Length = 516

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 20/296 (6%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F     +++ S    GRV N  G PID    +   D  ++I        +R   E+  +T
Sbjct: 99  FSGSSMKLAVSEDMLGRVFNGSGNPIDNGPKVFAEDY-LDINGSPINPYSRIYPEEMIQT 157

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------------V 190
           GI  ID    +  GQ+I +F+ +G+  + + +   R     K                 +
Sbjct: 158 GISTIDTMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKRPGATKGVHDGHEDNFSI 217

Query: 191 IISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + +G      R F +D+    ++  S + V  + +  I R + P  A+T AEYF+ + 
Sbjct: 218 VFAAMGVNMETARFFKQDFEESGSISNSTLFVNLASDPTIERIITPRLALTTAEYFAYQL 277

Query: 250 D-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           + +VL+++  ++ +A ++RE++    E+P  RGYP  ++++L  L ER G  E   G+IT
Sbjct: 278 ERHVLVVMTDMSSYADALREVSAAREEVPGRRGYPGYLYTDLATLYERAGRVEGRNGSIT 337

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            V  + +  D+   PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 338 QVPILTMPNDDITHPIPDLTGYITEGQIFVDRQLHNRQIYPPINVLPSLSRLMKSA 393


>gi|91201496|emb|CAJ74556.1| strongly similar to ATP synthase subunit alpha [Candidatus Kuenenia
           stuttgartiensis]
          Length = 504

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 175/395 (44%), Gaps = 26/395 (6%)

Query: 13  EDYSKNLVVQG-GYI----SSITSVYYTVTCLS-QYVCLGDFVVHQGKN--SDNLGQVIR 64
           E Y + L ++  GY+      +  +Y    C+S + +   D V     N   DN+G ++ 
Sbjct: 17  ESYEEKLKLENVGYVMQVGDGVARIYGLDECMSNELLEFPDNVYGIAMNLEEDNVGAIL- 75

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
                     +G  ++I  GD+V   G+    P      GRV+NALG PIDG   +   +
Sbjct: 76  ----------LGSEDKIKEGDIVKTTGKIVQVPVGKAMLGRVVNALGLPIDGKGPIATDE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               I    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+ +L  ++ 
Sbjct: 126 FR-PIEGNSPNVVERQPVKEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAILVDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   V   ++    +N +  S+VVVA++ +   L+ +AP     
Sbjct: 185 NQRTSGVYCIYVAIGQKMSTVASVVKTLEENNVMDNSIVVVASAGDPAPLQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + +++ D + + A + R+I+      P    +P  +F+   RLLER    
Sbjct: 245 MGEYFRDNGMHAVVMYDDLYKHAIAYRQISLLLRRPPGREAFPGDIFNLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V   G +++  I  +V SI DG I L   L   G  P +    SVS
Sbjct: 305 NDELGAGSLTALPVVETQGGDYSAYIPTNVISITDGQIYLESDLFNAGVRPAISVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           R+   A     KK+   L   + ++ E       G
Sbjct: 365 RVGGNAQIPAMKKVAGMLRLTLAQYREMASFAQFG 399


>gi|17510931|ref|NP_491518.1| Temporarily Assigned Gene name family member (tag-300)
           [Caenorhabditis elegans]
 gi|7331730|gb|AAF60418.1| Temporarily assigned gene name protein 300 [Caenorhabditis elegans]
          Length = 501

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 154/322 (47%), Gaps = 17/322 (5%)

Query: 59  LGQVIRI--NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116
           +GQV+    N  +V +     G +       F    FR   S    GR+ N  GKPID  
Sbjct: 77  MGQVLESSKNKAVVQVFEGTTGVDAKFTTCEFTGDIFRSPVSLDMLGRIFNGSGKPIDKG 136

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   D  ++I  +     NR   E+  +TGI  ID+   +  GQ+I +F+ +G+  + 
Sbjct: 137 PPVLPEDY-LDINGQPINPFNRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNE 195

Query: 177 LLSMFARSDCFDK------------VIISLVGERGREVREFIEDYLG-DNLKKSVVVVAT 223
           + +   R     +            ++ + +G      R F +D+    ++    + +  
Sbjct: 196 IAAQIVRQGGLVQLPGRNNETVNFAIVFAAMGVNMETARFFKQDFEECGSMDNVCLFLNL 255

Query: 224 SDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           +++  I R + P  A+T AE+F+   G +VL++L  ++ +A ++REI+    E+P  RG+
Sbjct: 256 ANDPTIERIITPRIALTAAEFFAYHCGKHVLVVLTDMSSYAEALREISAAREEVPGRRGF 315

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  ++++L  + ER G  +  +G+IT +  + +  ++   PI D    I +G I +++ L
Sbjct: 316 PGYMYTDLATIYERAGRVKGREGSITQIPILTMPNNDITHPIPDLTGYITEGQIYIDKQL 375

Query: 343 AEEGRYPPVDPLASVSRLADKA 364
            +   YPP+D L S+SRL   A
Sbjct: 376 HKRLIYPPIDVLPSLSRLMKSA 397


>gi|81428737|ref|YP_395737.1| F0F1 ATP synthase subunit alpha [Lactobacillus sakei subsp. sakei
           23K]
 gi|115312249|sp|Q38WK3|ATPA_LACSS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78610379|emb|CAI55429.1| H(+)-transporting two-sector ATPase (ATP synthase), alpha subunit
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 511

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 18/346 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G + V Q   ++++G +I           +G  E I  GD V   GR    P      GR
Sbjct: 58  GSYGVAQNLETNDVGIII-----------LGEYENIREGDQVKRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I  K P  M RQ V +  +TG++ ID   P+  GQR 
Sbjct: 107 VVNPLGQPVDGRGEI-KTDKTRPIEKKAPGVMARQSVSEPLQTGLKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKKSVVVVA 222
            +      GK+++ +         D + I + +G++   VR  +E           +VV 
Sbjct: 166 LIIGDRKTGKTSVAIDTIINQKGQDMICIYVAIGQKESTVRTQVETLRRYGAMDYTIVVE 225

Query: 223 TSDESPI-LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
                P  L  +AP     + E F   G +VL++ D +++ A + REI+      P    
Sbjct: 226 AGPSQPAPLLYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAAAYREISLLLRRPPGREA 285

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  +F    RLLER      E   G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 286 YPGDIFYLHSRLLERAAKLSDELGGGSMTALPIIETQAGDISAYIPTNVISITDGQIFLE 345

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             L   G  P +D  +SVSR+   A +   KK+  +L   +  + E
Sbjct: 346 SDLFYSGTRPAIDAGSSVSRVGGAAQTKAMKKVSGTLRLDLSSYRE 391


>gi|326328138|gb|ADZ54136.1| ATP synthase beta subunit [Bradyrhizobium sp. CCBAU 15772]
          Length = 222

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 17/215 (7%)

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGDN 213
           G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +  +
Sbjct: 2   GGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESKVNAD 61

Query: 214 --------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
                     K  +V    +E P  R    LT +TIAE F  KG +VL  +D+I RF  +
Sbjct: 62  PHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQA 121

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 122 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADDLTDPAP 179

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD    L+RS+AE+G YP VDPL S SR+
Sbjct: 180 ATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRM 214


>gi|58271360|ref|XP_572836.1| vacuolar ATP synthase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134114718|ref|XP_774067.1| hypothetical protein CNBH1120 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256697|gb|EAL19420.1| hypothetical protein CNBH1120 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229095|gb|AAW45529.1| vacuolar ATP synthase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 515

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 20/296 (6%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F     +++ S    GRV N  G PID    +   D  ++I        +R   E+  +T
Sbjct: 99  FSGSSMKLAVSEDMLGRVFNGSGNPIDNGPKVFAEDY-LDINGSPINPYSRIYPEEMIQT 157

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------------V 190
           GI  ID    +  GQ+I +F+ +G+  + + +   R     K                 +
Sbjct: 158 GISTIDTMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKRPGATKGVHDGHEDNFSI 217

Query: 191 IISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + +G      R F  D+    ++  S + V  + +  I R + P  A+T AEYF+ + 
Sbjct: 218 VFAAMGVNMETARFFKRDFEESGSISNSTLFVNLASDPTIERIITPRLALTTAEYFAYQL 277

Query: 250 D-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           + +VL+++  ++ +A ++RE++    E+P  RGYP  ++++L  L ER G  E   G+IT
Sbjct: 278 EKHVLVVMTDMSSYADALREVSAAREEVPGRRGYPGYLYTDLATLYERAGRVEGRNGSIT 337

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            V  + +  D+   PI D    I +G I ++R L+    YPP++ L S+SRL   A
Sbjct: 338 QVPILTMPNDDITHPIPDLTGYITEGQIFVDRQLSNRQIYPPINVLPSLSRLMKSA 393


>gi|319441097|ref|ZP_07990253.1| F0F1 ATP synthase subunit alpha [Corynebacterium variabile DSM
           44702]
          Length = 544

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 178/382 (46%), Gaps = 24/382 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 63  IGVAQNLETDSVGVVVLGHFESLKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLG 122

Query: 118 SL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           ++  + D  +E+  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 123 TIEAEEDRVLEL--QAPSVLQRQPVHEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTS 180

Query: 176 ----TLLSM---FARSDCFDKV--IISLVGERGR---EVREFIEDYLGDNLKKSVVVVAT 223
               T+L+    +A  D   +V  I   +G++G     VR+ +ED     L+ + +V A 
Sbjct: 181 VCIDTILNQRENWASGDKTKQVRCIYVAIGQKGSTIASVRKTLEDK--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPFAGAALGQHWMYQGAHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +    ++    I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLSDELGSGSMTALPIIETKANDVGAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  +L   +  +   RD+     +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGDAQTKGMKKVAGNLRLDLAAY---RDLEAFATFASDLDE 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSD 423
                + +   + + LKQ+ ++
Sbjct: 416 YSKAQLDRGERLVELLKQNETE 437


>gi|314938128|ref|ZP_07845433.1| ATP synthase ab [Enterococcus faecium TX0133a04]
 gi|313642475|gb|EFS07055.1| ATP synthase ab [Enterococcus faecium TX0133a04]
          Length = 579

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 167 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 226

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 227 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 286

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 287 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 346

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ SLA
Sbjct: 347 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLA 406

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 407 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 464


>gi|218283209|ref|ZP_03489279.1| hypothetical protein EUBIFOR_01867 [Eubacterium biforme DSM 3989]
 gi|218216027|gb|EEC89565.1| hypothetical protein EUBIFOR_01867 [Eubacterium biforme DSM 3989]
          Length = 580

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 190/421 (45%), Gaps = 22/421 (5%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E + Q      +N V   GY+ +I     T++ L  +   G+ VV +       G V+ I
Sbjct: 97  EAIEQFEATSQENEV---GYVETIGDGIATISGLD-HAMYGEVVVFENGTK---GMVLDI 149

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
             + + +        I  G  V    +    P S+ + GRV++ LG PIDG   +   ++
Sbjct: 150 TTENIGVILFDTEGTIGQGTKVSRTKKQAGMPVSSNFLGRVVDPLGNPIDGLGPIEATEM 209

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLS 179
              I    P  +NR+ V    +TGI  ID   P+  GQR  +      GK+     T+L+
Sbjct: 210 R-PIEEPAPSIINRKPVTNPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIALDTILN 268

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTA 238
              + DC    I   + ++   V   +      D +  +V+V +T+ +S  L+ +AP +A
Sbjct: 269 QKGK-DCI--CIYVSIAQKASTVANLVNTLKKNDAMDYTVIVNSTAADSASLQYIAPYSA 325

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            ++AEYF  +G +VL++ D +++ A + R I+   G  P    YP  VF    RLLER  
Sbjct: 326 TSLAEYFMHQGKDVLIVYDDLSKHAVAYRTISLLLGRSPGREAYPGDVFYLHSRLLER-S 384

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  +     + +  I  +V SI DG I L   L  EG+ P V+   SVS
Sbjct: 385 SRLNSGGSITALPIIETQDGDVSAYIPTNVISITDGQIFLESDLFFEGQRPAVNVGLSVS 444

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK   SL   + ++   R+++    +   +D    + +    ++ + LK
Sbjct: 445 RVGGAAQTKAMKKASGSLRINLAQY---REMKEFTQFASDLDDATKRQLQHGQVLMELLK 501

Query: 419 Q 419
           Q
Sbjct: 502 Q 502


>gi|319760156|ref|YP_004124094.1| ATP synthase subunit alpha [Candidatus Blochmannia vafer str. BVAF]
 gi|318038870|gb|ADV33420.1| ATP synthase subunit alpha [Candidatus Blochmannia vafer str. BVAF]
          Length = 513

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 152/333 (45%), Gaps = 20/333 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+NALG PID   ++        I SK P  ++RQ + +  +TG + ID   P+  GQ
Sbjct: 105 GRVVNALGIPIDNKGAV-NCSCYYPIESKAPGVIDRQSISEPIQTGYKAIDSMIPIGKGQ 163

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDN-LKKSVV 219
           R  +      GKS L      +  F   K I   +G++   V   ++     N L  ++V
Sbjct: 164 RELIIGDRQTGKSALAIDTIINQRFSGVKCIYVAIGQKATTVANVVKKLEEHNALGNTIV 223

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           ++A++ ES +L+ +AP     + EYF + G++ L++ D +++ A + R+I+      P  
Sbjct: 224 ILASASESAVLQYLAPYAGCAMGEYFRNHGEDALIVYDDLSKQAIAYRQISLLLKRPPGR 283

Query: 280 RGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIAD 326
             YP  +F    RLLER              G    + G++TA+  +     + +  I  
Sbjct: 284 EAYPGDIFYLHSRLLERSAKVNVNYIEHNTEGRVMGKTGSLTALPIIETQAGDVSAFIPT 343

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P V+P  SVSR+   A +   K L   +   + ++   
Sbjct: 344 NVISITDGQIFLESYLFNAGIRPAVNPGISVSRVGGAAQTNIMKTLSGGIRTALAQY--- 400

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           R++     +   +D    K +H    + + LKQ
Sbjct: 401 RELAAFSQFSSELDSSTRKQLHHGQKVTELLKQ 433


>gi|24379919|ref|NP_721874.1| F0F1 ATP synthase subunit alpha [Streptococcus mutans UA159]
 gi|2493021|sp|P95787|ATPA_STRMU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|24377899|gb|AAN59180.1|AE014985_4 FoF1 membrane-bound proton-translocating ATPase, alpha subunit
           [Streptococcus mutans UA159]
 gi|1773264|gb|AAD13381.1| ATPase, alpha subunit [Streptococcus mutans]
          Length = 501

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 160/350 (45%), Gaps = 26/350 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G F + Q   S ++G +I           +G    I  GD V   G+    P      GR
Sbjct: 58  GTFGMAQNLESSDIGIII-----------LGDFNSIREGDTVKRTGKIMEVPVGQSLIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           V+N LG+P+DG   LG+ + +    + +  P  M RQ V +  +TGI+ ID   P+  GQ
Sbjct: 107 VVNPLGQPVDG---LGEIETTATRPVEAAAPGVMQRQSVSEPLQTGIKAIDALVPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVR---EFIEDYLGDNLKKS 217
           R  V      GK+++ +         D + I + +G++   VR   E +  Y    L  +
Sbjct: 164 RELVIGDRQTGKTSIAIDAIINQKGQDMICIYVAIGQKESTVRSQVEVLRKY--GALDYT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VV A++ +   L  +AP   V +AE F   G + L++ D +++ A + RE++      P
Sbjct: 222 IVVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHALIVYDDLSKQAVAYRELSLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG 
Sbjct: 282 GREAYPGDVFYLHSRLLERSAKLSDELGGGSITALPFIETQAGDISAYIATNVISITDGQ 341

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           I L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E
Sbjct: 342 IFLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRE 391


>gi|148262507|ref|YP_001229213.1| V-type ATP synthase subunit B [Geobacter uraniireducens Rf4]
 gi|189030163|sp|A5GCR3|VATB_GEOUR RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|146396007|gb|ABQ24640.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Geobacter uraniireducens Rf4]
          Length = 440

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 169/356 (47%), Gaps = 22/356 (6%)

Query: 49  VVH-QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVI 106
           +VH  G+  D  G+V++I  + V I   G    + +   V      +++P S    GRV 
Sbjct: 35  IVHPDGETVD--GEVLKIEGETVLIQVFGETRGLGMDAPVAFTDGVKMAPLSPDMIGRVF 92

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           +    PIDG         +      + P   R R E+  +TGI  ID    L  GQ++ V
Sbjct: 93  DGSFHPIDGSPLFVPERWTPATGQPINPTA-RARPEEFIETGITAIDALNTLVKGQKLPV 151

Query: 167 FAGSGIGKSTLLSM------FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220
           F+ +G+    + +        A    F  V ++L G    +   ++E  L +     V  
Sbjct: 152 FSCAGLPSREVAAAVLQNARLAGGGEFVVVFVAL-GLTHHDYSFYMES-LAEMKTGFVAF 209

Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V  +DE  + R +AP   +  AE+ + ++G +VL+++  +T +  ++RE++T   ELP  
Sbjct: 210 VNRADEPVVERLLAPRFGLAAAEFLAFNRGMDVLVLITDMTNYCDALREVSTAREELPGR 269

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           RGYP  ++S+L  L ER G  +   G++T +  V +  D+   PI D    I +G IVL+
Sbjct: 270 RGYPGYMYSDLASLYERAGRIKGMAGSVTMLPVVTMPEDDITHPIPDLTGYITEGQIVLS 329

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDIR 390
           R L ++G +PPVD L S+SRL  +   A     D + +      L   + + RD+R
Sbjct: 330 RELHQKGVFPPVDVLPSLSRLMQRGIGAGHTRSDHRAIAD---RLYRHYAKGRDLR 382


>gi|323342945|ref|ZP_08083176.1| ATP synthase F1 sector alpha subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322463009|gb|EFY08204.1| ATP synthase F1 sector alpha subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 506

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 7/337 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
           N +  G  + +  + V +  +G  + +  GD+V+       +       GRV+NALG+PI
Sbjct: 56  NDEVFGLALNLEENQVGVVLLGNDKLVKEGDVVYRTNHIIEVGVGDALLGRVVNALGQPI 115

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   D+   I    P  M R+ V +   TGI+V+D   P+  GQR  +      G
Sbjct: 116 DGQGPVETVDVR-PIERVAPGVMTRKSVHEPLHTGIKVVDSMIPIGKGQRELIIGDRQTG 174

Query: 174 KST--LLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPIL 230
           K++  L ++  +     K I   +G++   V   +E     D L+ +VVV +T+ E   L
Sbjct: 175 KTSIALNAILNQKGQNVKCIYVAIGQKASTVAMVVEKLKEHDALEYTVVVSSTASELAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP T   I E++   G++VL++ D +++ A + R I+           YP  VF   
Sbjct: 235 QYLAPYTGCAIGEHWMDNGEDVLIVYDDLSKHAVAYRTISLLLRRPAGREAYPGDVFYLH 294

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     +    G++TA+  +     + +  I  +V SI DG + LN      G  
Sbjct: 295 SRLLERSAKLNENYGGGSMTALPIIETQAGDISAYIPTNVISITDGQLFLNLDSFNSGVR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P VD   SVSR+   A +   K + SSL   +  + E
Sbjct: 355 PAVDSGMSVSRVGSAAQTKAMKHVASSLKLELATYHE 391


>gi|152998459|ref|YP_001343294.1| ATP synthase F1 subunit alpha [Marinomonas sp. MWYL1]
 gi|190358156|sp|A6W3T0|ATPA2_MARMS RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|150839383|gb|ABR73359.1| ATP synthase F1, alpha subunit [Marinomonas sp. MWYL1]
          Length = 514

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 145/304 (47%), Gaps = 27/304 (8%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV++ALG PIDG     KG ++ ++  KV    P  + RQ V++  +TG + ID   P+
Sbjct: 106 GRVVDALGNPIDG-----KGAINAKLTDKVEKVAPGVIERQSVDQPIQTGYKAIDAMVPI 160

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNL 214
             GQR  +     IGK+ L   ++ A+ D   K +   +G++   +   +   +  G   
Sbjct: 161 GRGQRELIIGDRQIGKTALAIDTIIAQKDSGIKCVYVAIGQKQSTIANVVRKLEEAGAME 220

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
             +VV    SD + +L  +AP T  T+ EYF  +G++ L+I D +T+ A + R+I+    
Sbjct: 221 YTTVVAAGASDPAAMLY-IAPYTGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQISLLLR 279

Query: 275 ELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHN 321
             P    YP  VF    RLLER              G  + + G++TA+  +   G + +
Sbjct: 280 RPPGREAYPGDVFYLHSRLLERASRVNVDYVEKFTNGEVKGKTGSLTALPIIETQGGDVS 339

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             +  +V SI DG I L  S    G  P ++   SVSR+   A +   KKL   +   + 
Sbjct: 340 AFVPTNVISITDGQIFLETSSFNAGIRPAMNAGISVSRVGGAAQTKIVKKLGGGIRLALA 399

Query: 382 RFEE 385
           ++ E
Sbjct: 400 QYRE 403


>gi|171116|gb|AAA66888.1| ATPase 1 alpha subunit [Saccharomyces cerevisiae]
          Length = 544

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 20/300 (6%)

Query: 102 CGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
            GRV++ALG PIDG    D+ G+    +    K P  + R+ V +  +TG++ +D   P+
Sbjct: 141 LGRVVDALGNPIDGKGPIDAAGRSRAQV----KAPGILPRRSVHEPVQTGLKAVDALVPI 196

Query: 159 CHGQRIGVFAGSGIGKS-----TLLSMFARSDCFDK-----VIISLVGERGREVREFIED 208
             GQR  +      GK+     T+L+    ++  D+      +   VG++   V + ++ 
Sbjct: 197 GRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQT 256

Query: 209 Y-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               D +K S++V AT+ E+  L+ +AP TA +I E+F   G + L++ D +++ + + R
Sbjct: 257 LEQHDAMKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKASLAYR 316

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGP-SEKE-KGNITAVISVLVDGDNHNDPIA 325
           +++      P    YP  VF    RLLER    SEKE  G++TA+  +   G + +  I 
Sbjct: 317 QLSLMLRRPPGREAYPGDVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIP 376

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI D  I L   L  +G  P ++   SVSR+   A     K++  SL   + ++ E
Sbjct: 377 TNVISITDAQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE 436


>gi|313199651|ref|YP_004021267.1| ATP synthase CF1 alpha subunit [Isoetes flaccida]
 gi|291575380|gb|ADE18093.1| ATP synthase CF1 alpha subunit [Isoetes flaccida]
          Length = 507

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 9/331 (2%)

Query: 63  IRINL--DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +
Sbjct: 63  IALNLESDNVGVVLMGDGLAIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGKGQI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 PASEFRL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPL 236
               +     VI   V  G++   V + + ++      +  +VVA +  SP  L+ +AP 
Sbjct: 182 DTILNQKGQNVICVYVAIGQKASSVAQVVNNFEERGAMEYTIVVAETANSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 AGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                S+  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D  
Sbjct: 302 AAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIDVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A     K++   L   + +F E
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 392


>gi|283769630|ref|ZP_06342526.1| ATP synthase ab C-terminal [Bulleidia extructa W1219]
 gi|283103898|gb|EFC05284.1| ATP synthase ab C-terminal [Bulleidia extructa W1219]
          Length = 471

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 12/268 (4%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID    +   +   ++  +    ++RQ       TGI  ID    L  GQ
Sbjct: 87  GRIFNGLGEPIDDLGPVFVKNYE-DVNGRPLNPISRQYPRHYINTGISAIDGLNTLIRGQ 145

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCF-----DKVIISLVGERG--REVREFIEDYLGDN-- 213
           ++ +F+G G+    L     R         DK  I + G  G  ++V +  +    +   
Sbjct: 146 KLPIFSGFGLPHDQLAIQIVRQAHLTGEDADKFCI-VFGAMGVKKDVADIFQKAFEETGV 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272
           ++K  + +  +D+  + R M P  A+T AEY +  +  NVL+IL  +T +  ++RE ++ 
Sbjct: 205 MEKVCMYLNLADDPILERMMTPRVALTAAEYLAFEEHQNVLVILTDMTSYCEAVREFSST 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE+P  +GYP  ++S+L  L ER G  +  KG++T +  + +  D+   P+ D    I 
Sbjct: 265 LGEIPSRKGYPGYLYSDLASLYERAGIIQGGKGSVTQIPILTMPNDDITHPVPDLTGYIT 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +G IVL+R L   G  PP+  L+S+SRL
Sbjct: 325 EGQIVLDRDLFMNGIQPPIGILSSLSRL 352


>gi|149174230|ref|ZP_01852857.1| F0F1 ATP synthase subunit alpha [Planctomyces maris DSM 8797]
 gi|148846775|gb|EDL61111.1| F0F1 ATP synthase subunit alpha [Planctomyces maris DSM 8797]
          Length = 514

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 9/334 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           LG  + ++   V +  +  GE+++ GD V    R    P      GRVI+ +G+P+DG  
Sbjct: 66  LGLALNLDEHEVGVVLLDHGEQLTAGDEVRRTHRLLDVPVGESLIGRVIDPVGRPLDGHG 125

Query: 118 SLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +   +       + P A+ +R  V    +TG++VID   P+  GQR  +      GK+ 
Sbjct: 126 PITAAE--RRPYERDPAAIIDRAPVTVPLQTGLKVIDALIPIGRGQRELILGDRQTGKTA 183

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           +   ++  + +     I   +G+R   V + I+D      L+ + VVV  SD  P L+ +
Sbjct: 184 IAIDTILNQKNKDVICIYCAIGQRNTAVAKVIDDLRTQGALEYTTVVVGESDAPPGLQFV 243

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP  A T+ EYF  +G +VL+I D +T  A S RE++      P    +P  +F    RL
Sbjct: 244 APYAATTLGEYFMDQGQDVLVIYDDLTSHARSYRELSLLLRRPPGREAFPGDIFYLHSRL 303

Query: 294 LERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER          G++TA+     +  N +  I  ++ SI DG I L+  L ++G  P V
Sbjct: 304 LERSTHLADRLGGGSLTALPIAETEAQNLSAYIPTNLISITDGQIYLSPQLFQKGILPAV 363

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D   SVSR+  K      + +   L     +FEE
Sbjct: 364 DVGRSVSRVGGKTQLPAYRAVAGDLRLSYSQFEE 397


>gi|1168565|sp|P42005|ATPA_BACST RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|534852|dbj|BAA07253.1| ATPase subunit alpha [Geobacillus stearothermophilus]
          Length = 502

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ IV + P  GI E    GD V   GR    P      GRV+N LG+P+DG   +   +
Sbjct: 70  NVGIVILGPYTGIKE----GDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++ 
Sbjct: 126 -TRPIESPAPGVMDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLFVRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              K  G++TA+  V     + +  I  +V SI DG I L   L      P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSRVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGAAQIKAMKKVAGTL 382


>gi|283787577|ref|YP_003367442.1| ATP synthase subunit alpha [Citrobacter rodentium ICC168]
 gi|282951031|emb|CBG90709.1| ATP synthase alpha subunit [Citrobacter rodentium ICC168]
          Length = 513

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 145/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG PIDG     KG +  +  S V    P  + RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGAPIDG-----KGPVEHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++  + D   K +   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVAT+ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|224477093|ref|YP_002634699.1| ATP synthase alpha chain (fragment 2) [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|222421700|emb|CAL28514.1| truncated ATP synthase alpha chain (fragment 2) [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 455

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ IV + P     +I  GD V   GR    P      GRV+N LG+P+DG   + K D 
Sbjct: 23  NVGIVILGPY---TDIKEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPLDGQGPI-KTDK 78

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +  K    M RQ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 79  TRPVEEKATGVMARQSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTILN 138

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP + VT+
Sbjct: 139 QADQDMICIYVAIGQKESTVRATVEKLRQSGALDYTIVVTASAADLAPLLYIAPYSGVTM 198

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G  VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 199 GEEFMFNGKQVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 258

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 259 DSLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLESDLFFSGVRPAINAGFSVSR 318

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  + E       G
Sbjct: 319 VGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG 352


>gi|90110817|sp|Q6L3A1|ATPA_SACHY RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
          Length = 507

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 171/369 (46%), Gaps = 12/369 (3%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +
Sbjct: 63  IALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 VASE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPL 236
               +     VI   V  G+R   V + +  +  +   +  +VVA   +SP  L+ +AP 
Sbjct: 182 DTILNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKFNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   L   + +F E   ++    +   +D      + +   + 
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKLKLELAQFAE---LQAFAQFASALDKTSQNQLARGRRLR 418

Query: 415 DFLKQSPSD 423
           + LKQS S+
Sbjct: 419 ELLKQSQSN 427


>gi|320100290|ref|YP_004175882.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Desulfurococcus mucosus DSM 2162]
 gi|319752642|gb|ADV64400.1| H+transporting two-sector ATPase alpha/beta subunit central region
           [Desulfurococcus mucosus DSM 2162]
          Length = 585

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 150/314 (47%), Gaps = 29/314 (9%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F TG+RVID   PL  G +  V  G G GK+ LL    +    D  I    GERG E+ +
Sbjct: 207 FITGVRVIDFLFPLAKGGKAAVPGGFGTGKTVLLHSITKWSEADITIYIGCGERGNEMAD 266

Query: 205 FIEDYLG--------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
            +  ++           +++S+ +  TS+     R+ +    VTI EYF   G NVLL+ 
Sbjct: 267 ALNSFIKLVDPRTGKPMMERSIFIANTSNMPVAAREASVFLGVTIGEYFRDMGYNVLLVA 326

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER------IGPSEKEKGNITAV 310
           DS +R+A ++REI+    ELP   G+P  + S L +  ER      IG +E+  G++T +
Sbjct: 327 DSTSRWAEAMREISGRLEELPGEEGFPAYLASRLAQFYERSGYVKTIGSAER-LGSLTIM 385

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD--KAW--- 365
            +V   G + ++P+  +   ++     L+ +LA    YP ++ L S S   D  + W   
Sbjct: 386 GAVSPPGADFSEPVTQATLRLIRALYALDVNLAYRRHYPSINWLTSFSLYVDNVREWWSK 445

Query: 366 -SADEKKLVSSLTHLIHRFEETRD-IRLIGGYRPGVDLILDKAVHQVP--IIYDFLKQSP 421
            S +   L   ++ L+ R  E  + +RL+G     V+   D+ V +V   I  DFL+Q  
Sbjct: 446 ISPEYSYLREKISWLLQREAELEELVRLVGADALPVE---DRLVLEVARMIREDFLQQ-- 500

Query: 422 SDLSSEDVFQEITK 435
              S+ D F    K
Sbjct: 501 DAFSTVDAFSHPVK 514


>gi|157285117|gb|ABV31298.1| ATPase [Vibrio mytili]
          Length = 415

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 29/307 (9%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFT 156
             GRV+N LG+PIDG     KG +  ++ S V    P  ++R+ V++  +TG + +D   
Sbjct: 67  LLGRVVNTLGEPIDG-----KGPIEAKLTSPVEMIAPGVIDRKSVDQPVQTGYKSVDSMI 121

Query: 157 PLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLG 211
           P+  GQR  +     IGK+ L   S+  + D     I   +G++   +   +   E++  
Sbjct: 122 PIGRGQRELIIGDRQIGKTALAIDSIINQKDSGIFSIYVAIGQKASTIANVVRKLEEH-- 179

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
             L+ ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+ 
Sbjct: 180 GALQNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISL 239

Query: 272 NSGELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGD 318
                P    +P  VF    RLLER              G  + + G++TA+  +     
Sbjct: 240 LLKRPPGREAFPGDVFYLHSRLLERAARVNEDYVERFTNGEVKGKTGSLTALPIIETQAG 299

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +  
Sbjct: 300 DVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRT 359

Query: 379 LIHRFEE 385
            +  + E
Sbjct: 360 ALAAYRE 366


>gi|108773233|ref|YP_635719.1| CF1 alpha subunit of ATP synthase [Chara vulgaris]
 gi|118573475|sp|Q1ACM8|ATPA_CHAVU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|77157889|gb|ABA61930.1| CF1 alpha subunit of ATP synthase [Chara vulgaris]
          Length = 508

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 161/340 (47%), Gaps = 26/340 (7%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+    P    + GRV+NAL +PID
Sbjct: 72  SDNVGAVL-----------MGEGLTIQEGSSVKATGKIAQIPVGDSYLGRVVNALARPID 120

Query: 115 GDDSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           G     KGD+    S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +    
Sbjct: 121 G-----KGDIDTSESRLIESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDR 175

Query: 171 GIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
             GK+ + +         D + + + +G++   V + +  +   + L  ++VV  T++ S
Sbjct: 176 QTGKTAVAVDTILNQKGQDVICVYVAIGQKASSVAQVVNTFEDRSALSYTIVVAETANSS 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP T  ++AEYF  KG + L++ D +++ A + R+++      P    YP  VF
Sbjct: 236 ATLQYLAPYTGASLAEYFMYKGRHTLVVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVF 295

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER     S+  +G++TA+  V     + +  I  +V SI DG I L+  L   
Sbjct: 296 YLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNA 355

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A     K++   L   + +F E
Sbjct: 356 GIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 395


>gi|149798661|gb|ABR32021.1| ATP synthase beta chain [Hymenasplenium unilaterale]
          Length = 426

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 159/337 (47%), Gaps = 31/337 (9%)

Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V D+  P   
Sbjct: 40  GRIFNVLGEPVD---NLGPVRSSATFPIHRSAPAFTQLDTKLSIFETGIKVADLLAPYRR 96

Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214
           G +IG   G+G+GK+  +    +  A++     V   +  ER RE  +   +     +  
Sbjct: 97  GGKIGSLGGAGVGKTVPIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVIN 155

Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA T+AEYF      +VL  +D+I RF  +  
Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLPFIDNIFRFVQAGS 215

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385
             + LD   VL+R LA +G YP VDPL S S +  + W   E+       +   + R++E
Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRYKE 332

Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419
            +DI  I    PG+D + ++    V +   I  FL Q
Sbjct: 333 LQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365


>gi|319406293|emb|CBI79930.1| ATP synthase alpha chain [Bartonella sp. AR 15-3]
          Length = 511

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 158/343 (46%), Gaps = 19/343 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + + +D V I   G   +I  GD V   G     P      GRV++ALG PIDG   
Sbjct: 61  GMALNLEMDNVGIVIFGSDRDIREGDTVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-L 177
           + K      +  K P  + RQ V +   TG++VID   P+  GQR  V      GK+  L
Sbjct: 121 I-KTKERRRVDVKAPGIIPRQSVHEPMSTGLKVIDALIPIGRGQRELVIGDRQTGKTAIL 179

Query: 178 LSMFARSDCF---------DKV--IISLVGERGREVREFIE--DYLGDNLKKSVVVVATS 224
           L  F     F         DK+  I   +G++   V +F++  +  G  L  S++V AT+
Sbjct: 180 LDTFLNQKRFHENSTGQDQDKIYCIYVAIGQKRSTVAQFVKILEERG-ALDYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP 
Sbjct: 239 SDPAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     ++   G++TA+  +    ++ +  I  +V SI DG I L  +L
Sbjct: 299 DVFYLHSRLLERAAKLNADNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             +G  P V+   SVSR+   A     K++  S+   + ++ E
Sbjct: 359 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE 401


>gi|299821859|ref|ZP_07053747.1| H(+)-transporting two-sector ATPase, F(1) alpha subunit [Listeria
           grayi DSM 20601]
 gi|299817524|gb|EFI84760.1| H(+)-transporting two-sector ATPase, F(1) alpha subunit [Listeria
           grayi DSM 20601]
          Length = 504

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 156/343 (45%), Gaps = 11/343 (3%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G    +  + V I  +G   EI  GD V   G+    P      GRV+N+LG PIDG  
Sbjct: 60  MGMAQNLETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEALIGRVVNSLGLPIDG-- 117

Query: 118 SLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            LG  + S    + +  P  M RQ V++  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 118 -LGPIETSATRPVEAIAPGVMQRQSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
           ++   ++  ++D     I   +G++   VR  +E       L  ++VV A++ +   L  
Sbjct: 177 SVAIDTILNQADQDMICIYVAIGQKESTVRNAVETLRSHGALDYTIVVSASASQPAPLLY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V + E F   G +VL++ D +++ A + RE++      P    YP  VF    R
Sbjct: 237 LAPYAGVAMGEEFMYNGKHVLIVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSR 296

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +    G+ITA+  V     + +  I  +V SI DG I L   L   G  P 
Sbjct: 297 LLERAAKLSEALGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           ++P  SVSR+   A     KK+  +L   +  + E       G
Sbjct: 357 INPGLSVSRVGGSAQIKAMKKVAGTLRLDLAAYRELESFSQFG 399


>gi|168185930|ref|ZP_02620565.1| ATP synthase F1, alpha subunit [Clostridium botulinum C str.
           Eklund]
 gi|169296141|gb|EDS78274.1| ATP synthase F1, alpha subunit [Clostridium botulinum C str.
           Eklund]
          Length = 502

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 163/337 (48%), Gaps = 9/337 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +D  G  + +  D V    +G  + I  GD+V   GR    P      GRV+NALG+P+D
Sbjct: 57  NDVYGMALNLEQDNVGCVLLGPEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  I  + P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGPI-KCTQTRAIELEAPGVIERKSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDY--LGDNLKKSVVVVATSDESPIL 230
           + +   ++  +     K I   +G++   V   +     +G  +  ++VV +T+ +S  L
Sbjct: 176 TAIAIDTILNQKGKDVKCIYVAIGQKQSTVAHIVNTLTEMG-AMDYTIVVSSTASDSAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + ++P    ++AEYF  KG++VL+I D +++ A + R ++      P    YP  VF   
Sbjct: 235 QFLSPYAGCSMAEYFMLKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G+ITA+  +     +    I  +V SI DG I L   L   G+ 
Sbjct: 295 SRLLERAAKLSDKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQK 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P V+   SVSR+   A     K++  +L   + ++ E
Sbjct: 355 PAVNAGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE 391


>gi|91783926|ref|YP_559132.1| ATP synthase F1, alpha subunit [Burkholderia xenovorans LB400]
 gi|118573468|sp|Q13XV9|ATPA1_BURXL RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|91687880|gb|ABE31080.1| ATP synthase F1, alpha subunit [Burkholderia xenovorans LB400]
          Length = 510

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 136/267 (50%), Gaps = 6/267 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ LG+P+D D+ +      M I    P  ++R  V +  +TG+ ++D    +  GQ
Sbjct: 103 GRVIDPLGRPLDRDEPVATVK-RMPIERPAPAIIDRDLVSEPVETGVLIVDALFAVGRGQ 161

Query: 163 RIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNL-KKSVV 219
           R  +      GK+ L L         D + I + +G+R   V++ IE        ++ V 
Sbjct: 162 RELIIGDRATGKTALALDAIVNQKHSDMICIYVAIGQRSTAVQQVIESVRRYGAPERCVF 221

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA +  +  L+ +AP   VTIAEYF  +G + L+++D +T+ A + RE+A  + E P  
Sbjct: 222 VVAPAASAAGLQWIAPFAGVTIAEYFRDRGQHALVVIDDLTKHAATHRELALLTREPPGR 281

Query: 280 RGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  +F    RLLER     ++   G++TA+     D  N +  I  ++ SI DG IV
Sbjct: 282 EAYPGDIFYVHARLLERAAKLSAKLGGGSLTALPIAETDAGNLSAYIPTNLISITDGQIV 341

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA 364
           L+ +L    + P VD   SVSR+  KA
Sbjct: 342 LDAALFAANQRPAVDVGLSVSRVGGKA 368


>gi|69245113|ref|ZP_00603237.1| Sodium-transporting two-sector ATPase [Enterococcus faecium DO]
 gi|257879673|ref|ZP_05659326.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,230,933]
 gi|257882669|ref|ZP_05662322.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,502]
 gi|257890339|ref|ZP_05669992.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,410]
 gi|257892947|ref|ZP_05672600.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,408]
 gi|258616718|ref|ZP_05714488.1| V-type ATP synthase subunit A [Enterococcus faecium DO]
 gi|260559665|ref|ZP_05831845.1| sodium-transporting two-sector ATPase [Enterococcus faecium C68]
 gi|293553107|ref|ZP_06673745.1| V-type ATP synthase alpha chain [Enterococcus faecium E1039]
 gi|293560067|ref|ZP_06676571.1| V-type ATP synthase alpha chain [Enterococcus faecium E1162]
 gi|293568807|ref|ZP_06680121.1| V-type ATP synthase alpha chain [Enterococcus faecium E1071]
 gi|294617540|ref|ZP_06697170.1| V-type ATP synthase alpha chain [Enterococcus faecium E1679]
 gi|294622743|ref|ZP_06701698.1| V-type ATP synthase alpha chain [Enterococcus faecium U0317]
 gi|314943832|ref|ZP_07850567.1| ATP synthase ab [Enterococcus faecium TX0133C]
 gi|314949790|ref|ZP_07853100.1| ATP synthase ab [Enterococcus faecium TX0082]
 gi|314951198|ref|ZP_07854256.1| ATP synthase ab [Enterococcus faecium TX0133A]
 gi|314994429|ref|ZP_07859713.1| ATP synthase ab [Enterococcus faecium TX0133B]
 gi|314995625|ref|ZP_07860719.1| ATP synthase ab [Enterococcus faecium TX0133a01]
 gi|68195956|gb|EAN10389.1| Sodium-transporting two-sector ATPase [Enterococcus faecium DO]
 gi|257813901|gb|EEV42659.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,230,933]
 gi|257818327|gb|EEV45655.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,502]
 gi|257826699|gb|EEV53325.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,410]
 gi|257829326|gb|EEV55933.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,231,408]
 gi|260074333|gb|EEW62655.1| sodium-transporting two-sector ATPase [Enterococcus faecium C68]
 gi|291588524|gb|EFF20358.1| V-type ATP synthase alpha chain [Enterococcus faecium E1071]
 gi|291596146|gb|EFF27409.1| V-type ATP synthase alpha chain [Enterococcus faecium E1679]
 gi|291597794|gb|EFF28931.1| V-type ATP synthase alpha chain [Enterococcus faecium U0317]
 gi|291602698|gb|EFF32912.1| V-type ATP synthase alpha chain [Enterococcus faecium E1039]
 gi|291605934|gb|EFF35364.1| V-type ATP synthase alpha chain [Enterococcus faecium E1162]
 gi|313590213|gb|EFR69058.1| ATP synthase ab [Enterococcus faecium TX0133a01]
 gi|313591201|gb|EFR70046.1| ATP synthase ab [Enterococcus faecium TX0133B]
 gi|313596677|gb|EFR75522.1| ATP synthase ab [Enterococcus faecium TX0133A]
 gi|313597556|gb|EFR76401.1| ATP synthase ab [Enterococcus faecium TX0133C]
 gi|313643863|gb|EFS08443.1| ATP synthase ab [Enterococcus faecium TX0082]
          Length = 593

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ SLA
Sbjct: 361 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 478


>gi|292670133|ref|ZP_06603559.1| ATP synthase F1 [Selenomonas noxia ATCC 43541]
 gi|292648232|gb|EFF66204.1| ATP synthase F1 [Selenomonas noxia ATCC 43541]
          Length = 505

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 156/339 (46%), Gaps = 11/339 (3%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113
            +D  G V+ +  + V    +G   EI  GD V   GR    P      GRV++ALG+PI
Sbjct: 56  GNDVYGLVLNLEQESVGAVLLGGDTEIKEGDTVKRTGRIMQVPVGEAMIGRVVDALGRPI 115

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   +    + S  P   +R+ V +  +TG++ ID   P+  GQR  +    G G
Sbjct: 116 DGKGPIDTTEFR-PVESPAPGIADRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRGTG 174

Query: 174 KS-----TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESP 228
           K+     T+L+   ++     V I         V + +ED  G  +  ++VV AT+ +S 
Sbjct: 175 KTAIAVDTILNQKGQNCICVYVAIGQKASTVARVVKTLED--GGAMAYTIVVAATAADSA 232

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP   V +AEYF  KG + L + D +++ A + R ++      P    YP  VF 
Sbjct: 233 PLQYLAPYAGVAMAEYFMYKGGHALCVYDDLSKHAAAYRAMSLLLRRPPGREAYPGDVFY 292

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G+ITA+  +     + +  I  +V SI DG I+L+      G
Sbjct: 293 LHSRLLERAAKLSDALGAGSITALPIIETLAGDLSAYIPTNVISITDGQIMLDTDAFYSG 352

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             P ++   SVSR+   A     K++  ++   + ++ E
Sbjct: 353 IRPAINVGLSVSRVGGSAQIKAMKQVAGTMRLDLAQYRE 391


>gi|168334077|ref|ZP_02692293.1| V-type ATP synthase subunit A [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 589

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 11/236 (4%)

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P   R  + K   TG RVID F P+  G  +G+  G G GK+      A+    D ++  
Sbjct: 200 PTKERLPIYKPLITGQRVIDTFFPVAKGGTVGLPGGFGTGKTVTQHQLAKWSDADIIVYI 259

Query: 194 LVGERGREVREFIEDY--LGDN------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
             GERG E+   +E++  L D       +++++++  TS+     R+ +  T +T+AEYF
Sbjct: 260 GCGERGNEMTNVLEEFPSLIDPRTNRPLMERTILIANTSNMPVAAREASIYTGITMAEYF 319

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG---PSEK 302
              G +V ++ DS +R+A ++REIA    E+P   GYP  + S L +  ER G       
Sbjct: 320 RDMGYDVAIMADSTSRWAEALREIAGRLEEMPAEEGYPAYLPSRLAQFYERAGCVKTLNN 379

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           E+ ++T + +V   G + ++P+ ++ +  +   + L++ LA    YP ++ L S S
Sbjct: 380 EEASVTIIGAVSPPGGDFSEPVTENTKRFVSAFLALDKKLAYARHYPAINYLTSYS 435


>gi|294614384|ref|ZP_06694300.1| V-type ATP synthase alpha chain [Enterococcus faecium E1636]
 gi|291592692|gb|EFF24285.1| V-type ATP synthase alpha chain [Enterococcus faecium E1636]
          Length = 593

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ SLA
Sbjct: 361 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 478


>gi|15673748|ref|NP_267922.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281492358|ref|YP_003354338.1| ATP synthase F1 subunit alpha [Lactococcus lactis subsp. lactis
           KF147]
 gi|22653660|sp|Q9CER8|ATPA_LACLA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|12724788|gb|AAK05864.1|AE006406_8 ATP synthase alpha subunit [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281376022|gb|ADA65513.1| ATP synthase F1, alpha subunit [Lactococcus lactis subsp. lactis
           KF147]
 gi|326407253|gb|ADZ64324.1| F-type H+-transporting ATPase subunit alpha [Lactococcus lactis
           subsp. lactis CV56]
          Length = 500

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 11/329 (3%)

Query: 66  NLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   +  + +G+ +S+  GD V   G+   I       GRV+N LG+P+DG   L  G
Sbjct: 65  NLDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTG 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
             +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++ +   
Sbjct: 125 K-TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAI 183

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTA 238
                 D + I + +G++   VR  +E    LG      VV  + S  SP+L  +AP   
Sbjct: 184 LNQKGQDMICIYVAIGQKESTVRTQVETLRKLGAMDYTIVVTASASQPSPLLY-IAPYAG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER  
Sbjct: 243 AAMGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +S
Sbjct: 303 KLSDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VSR+   A     KK+  +L   +  F E
Sbjct: 363 VSRVGGAAQIKAMKKVAGTLRLDLASFRE 391


>gi|118579043|ref|YP_900293.1| F0F1 ATP synthase subunit alpha [Pelobacter propionicus DSM 2379]
 gi|118579928|ref|YP_901178.1| F0F1 ATP synthase subunit alpha [Pelobacter propionicus DSM 2379]
 gi|190358192|sp|A1ALL5|ATPA_PELPD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118501753|gb|ABK98235.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter propionicus
           DSM 2379]
 gi|118502638|gb|ABK99120.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter propionicus
           DSM 2379]
          Length = 502

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 9/333 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G V+ +  D V    +G    I  G  V   GR    P      GRV+NA+G+PIDG   
Sbjct: 61  GMVLNLEEDNVGAAVLGEFTAIKEGHTVKRTGRIAEVPVGEALIGRVVNAIGEPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + K D   ++  K P  + R+ V++   +G++ +D   P+  GQR  +      GK+ + 
Sbjct: 121 I-KTDTFSKVEIKAPGIVARKSVDQPMASGLKAVDAMVPIGRGQRELIIGDRQTGKTAVA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
           +         D + I + +G++   V + +   L D+  +  ++VV A++ ES  L+ +A
Sbjct: 180 VDTIINQKGGDVICIYVAIGQKRSTVAQVVAK-LSDHGAMDYTIVVAASASESAPLQFIA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P + VT+ EYF  KG + L+I D +++ A + R+++      P    YP  VF    RLL
Sbjct: 239 PYSGVTMGEYFRDKGQHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++
Sbjct: 299 ERACKLSDECGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFFSGVRPAIN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+  KA +   K++  +L   + ++ E
Sbjct: 359 VGLSVSRVGGKAQTKSMKQVAGTLRLNLAQYRE 391


>gi|332706680|ref|ZP_08426741.1| ATP synthase F1 subcomplex alpha subunit [Lyngbya majuscula 3L]
 gi|332354564|gb|EGJ34043.1| ATP synthase F1 subcomplex alpha subunit [Lyngbya majuscula 3L]
          Length = 505

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 155/338 (45%), Gaps = 15/338 (4%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G +I  G  V   G+    P      GRV++ LG+PIDG 
Sbjct: 60  TVGIALNLEQDNVGAVLMGDGLQIQEGSSVTATGKIAQVPVGEALIGRVVDGLGRPIDG- 118

Query: 117 DSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KGD+    S  + S  P  + R+ V +  +TGI  ID   P+  GQR  +      
Sbjct: 119 ----KGDIQSTESRLVESIAPGIIARRSVCEPMQTGITAIDAMIPIGRGQRELIIGDRQT 174

Query: 173 GKSTLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           GK+ +      +   + VI   V  G++   V + +        L  +V+V A +++   
Sbjct: 175 GKTAIAVDTIINQKQEDVICVYVAIGQKASTVAQVVNTLQEKGALDYTVIVAANANDPAT 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP T  +IAEYF   G   L+I D +++ A + R+++      P    YP  VF  
Sbjct: 235 LQFLAPYTGASIAEYFMYNGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYV 294

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      E   G++TA+  +     + +  I  +V SI DG I L+  L   G 
Sbjct: 295 HSRLLERAAKLNDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGV 354

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P ++P  SVSR+   A +   KK+   L   + +F++
Sbjct: 355 RPAINPGISVSRVGSAAQTKAMKKVAGKLKLELAQFDD 392


>gi|63091859|emb|CAH58780.1| ATP synthase alpha chain [Tetragenococcus solitarius]
          Length = 367

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 157/348 (45%), Gaps = 22/348 (6%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           G + + Q   S+++G +I  + D           +I  GD V   GR   I       GR
Sbjct: 19  GSYGMAQNLESNDVGIIILGDFD-----------DIREGDKVKRTGRIMEIPVGDAMIGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+ IDG   + K D +  +    P  M+RQ V +  +TG++ +D   P+  GQR 
Sbjct: 68  VVNPLGQAIDGQGEI-KTDKTRPVEGPAPGVMDRQSVSQPLQTGLKAVDALVPIGRGQRE 126

Query: 165 GVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVV 219
            V      GK+T+   ++  + D     I   +G++   VR   E +  Y    L  +VV
Sbjct: 127 LVIGDRKTGKTTIAIDTILNQKDQDVICIYVAIGQKDSTVRAQTETLRQY--GALDYTVV 184

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           + A + +   L  +AP   + I E F   G +VL++ D +++ A + RE++      P  
Sbjct: 185 MAAGASQPAPLLYLAPYAGIAIGEEFMYNGKDVLVVFDDLSKQAAAYRELSLLLRRPPGR 244

Query: 280 RGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  VF    RLLER      +   G++TA+  V     + +  I  +V SI DG I 
Sbjct: 245 EAYPGDVFYLHSRLLERAAKLSDDLGGGSLTALPFVETQAGDISAYIPTNVISITDGQIF 304

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   L   G  P +D   SVSR+   A +   KK+  +L   +  + E
Sbjct: 305 LESDLFYSGVRPSIDAGLSVSRVGGSAQTKAMKKVSGTLRVDLASYRE 352


>gi|312898815|ref|ZP_07758203.1| ATP synthase F1, alpha subunit [Megasphaera micronuciformis F0359]
 gi|310619977|gb|EFQ03549.1| ATP synthase F1, alpha subunit [Megasphaera micronuciformis F0359]
          Length = 511

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 157/338 (46%), Gaps = 23/338 (6%)

Query: 63  IRINLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE+  I  GD V   GR    P      GRV+N LG PIDG    
Sbjct: 62  LALNLEEDNVGAVLLGEDDLIKEGDTVRRTGRVMSVPVGDGMIGRVVNPLGAPIDG---- 117

Query: 120 GKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KGD+  +    I  +     +RQ V+   +TGI+ ID   P+  GQR  +    G GK+
Sbjct: 118 -KGDIQTKETRRIEVQASGIADRQPVKVPLQTGIKAIDSMVPIGRGQRELIIGDRGTGKT 176

Query: 176 TLL--SMFARSDCFDKVIISLVGERG----REVREFIEDYLGDNLKKSVVVVATSDESPI 229
            +   ++  + D     I   +G++     R VR   E      +  ++VV AT+ +   
Sbjct: 177 AIAIDTIINQKDSGVICIYVAIGQKASTVARVVRTLEEH---GAMAYTIVVAATASDGAP 233

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP   V++ EYF ++G +VL + D +++ A + R ++      P    YP  VF  
Sbjct: 234 LQYLAPYAGVSMGEYFMAQGKDVLCVYDDLSKHAQAYRAMSLLLRRPPGREAYPGDVFYL 293

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G 
Sbjct: 294 HSRLLERAAKLSDELGGGSITALPIIETLAGDVSAYIPTNVISITDGQIFLETELFNSGV 353

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P ++   SVSR+   A     KK+  +L   + ++ E
Sbjct: 354 RPAINVGLSVSRVGGSAQIKAMKKIAGTLRLDLAQYRE 391


>gi|161511849|emb|CAP16935.1| ATP synthase alpha subunit [Pediococcus damnosus]
          Length = 325

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 147/309 (47%), Gaps = 9/309 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 17  GMVQNLESNDVGIVILGNYDDIREGDTVKRTGRIMEVPVGDALIGRVVNTLGQPIDGKGE 76

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 77  I-KTDHTRPVEHKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 135

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKMA 234
             ++  + D     I   +G++   VR  +E  +  G      V+    S+ +P+L  +A
Sbjct: 136 IDTILNQKDQNIICIYVAIGQKESTVRTQVEALEKFGAMDYTIVLSAGPSEPAPMLY-LA 194

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RLL
Sbjct: 195 PYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLL 254

Query: 295 ERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER    S+K   G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D
Sbjct: 255 ERAAKLSDKLGAGSMTALPFVETKAGDISAYIPTNVISITDGQIFLDSDLFYSGTRPAID 314

Query: 353 PLASVSRLA 361
             +SVSR+ 
Sbjct: 315 AGSSVSRVG 323


>gi|145523559|ref|XP_001447616.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415131|emb|CAK80219.1| unnamed protein product [Paramecium tetraurelia]
          Length = 536

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 167/374 (44%), Gaps = 18/374 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118
           G  + +  D V I  +G   EI  GD+V   G     P      GRV +ALG PIDG   
Sbjct: 83  GMALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGP 142

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           + K +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+   
Sbjct: 143 V-KTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIA 201

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDES 227
             T+++     D  DK      I   +G++   V   ++       +K ++VV AT+ E+
Sbjct: 202 IDTIINQKPNFDSGDKNKQLYCIYVAIGQKRSTVANLVKILTQAGAMKYTIVVAATASEA 261

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   I EYF   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 262 APLQYLAPYSGCAIGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 321

Query: 288 SELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      E GN  +TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 322 YLHSRLLERAAKLNAENGNGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFK 381

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A     K +   L   + ++   R++     +   +D    +
Sbjct: 382 GIRPAINVGLSVSRVGSAAQIKAMKTVAGRLKLELAQY---REVAAFAQFGSDLDAATQQ 438

Query: 406 AVHQVPIIYDFLKQ 419
            +++   + + LKQ
Sbjct: 439 LLNRGAQLTELLKQ 452


>gi|332971781|gb|EGK10729.1| ATP synthase F1 sector alpha subunit [Desmospora sp. 8437]
          Length = 505

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 168/371 (45%), Gaps = 10/371 (2%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G    +  D V +  +G   EI  GD V   GR    P      GRV+N LG+P+DG  
Sbjct: 60  MGMAQNLEEDHVGVVILGPYTEIREGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           ++   +    + S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+
Sbjct: 120 AVETSEYR-PVESPAPGVMDRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTTV 178

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMA 234
              ++  + D     I   +G++   V   +E       +  ++VV A++ E   L  +A
Sbjct: 179 AVDTIINQKDQDMICIYVAIGQKQSTVVGVVEKLRKAGAMDYTIVVSASASEPSPLLFLA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + EYF  +G +VL++ D +T+ A + RE++      P    +P  VF    RLL
Sbjct: 239 PYAGCAMGEYFMYQGKHVLVVYDDLTKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLL 298

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER       K  G++TA+  +     + +  I  +V SI DG I L   L   G  P V+
Sbjct: 299 ERAAKLSDAKGGGSLTALPFIETQAGDISAYIPTNVISITDGQIFLETDLFHAGVRPAVN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  +L   + ++   RD++    +   +D      + +   
Sbjct: 359 VGTSVSRVGGDAQIKAMKKVSGTLKLDLAQY---RDLQAFAQFGSDLDKATQAKLSRGER 415

Query: 413 IYDFLKQSPSD 423
           + + LKQ  ++
Sbjct: 416 LVEILKQGENE 426


>gi|167750951|ref|ZP_02423078.1| hypothetical protein EUBSIR_01936 [Eubacterium siraeum DSM 15702]
 gi|167656130|gb|EDS00260.1| hypothetical protein EUBSIR_01936 [Eubacterium siraeum DSM 15702]
 gi|291557434|emb|CBL34551.1| Archaeal/vacuolar-type H+-ATPase subunit B [Eubacterium siraeum
           V10Sc8a]
          Length = 463

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPI 113
           +  LG+V+ +  D V +        ISL +  + F      I  S    GR  N  GKPI
Sbjct: 37  TKRLGRVVEMQGDKVVLQVFEGTNGISLTNTKISFTGKPLEIPLSTEMLGRTFNGAGKPI 96

Query: 114 DGDDSLGK------GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
           DG   LG+      GD++   ++ V  +  R  +     TGI  ID    L  GQ++ +F
Sbjct: 97  DG---LGEVFPQKYGDINGRALNPVARSYPRNYIH----TGISSIDALMTLIRGQKLPIF 149

Query: 168 AGSGIGKSTLL------SMFARSDCFD-KVIISLVGERGREVREFIEDYLGDNLKKSVVV 220
           +GSG+  + L       +  A S+  D  V+ + +G +      F   +    + + V +
Sbjct: 150 SGSGLSHNKLAVQIVKQAKIADSEGKDFAVVFAAMGVQNDVAEYFRRSFEETGVIQRVCM 209

Query: 221 VATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPV 278
                  PI+ R + P  A+T+AEY +  K  ++L+I+  +T +  ++RE +++ GE+P 
Sbjct: 210 FLNLSNDPIIERILTPRCALTVAEYLAFEKNMHILVIMTDLTSYCEALREFSSSKGEIPG 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +GYP  ++S+L  + ER G  E   G++T +  + +  D+   PI D    I +G IV 
Sbjct: 270 RKGYPGYLYSDLASMYERAGVVEGSTGSVTQIPILTMPNDDITHPIPDLTAYITEGQIVF 329

Query: 339 NRSLAEEGRYP 349
           +R+L + G YP
Sbjct: 330 DRNLDQTGIYP 340


>gi|307155267|ref|YP_003890651.1| ATP synthase F1 subunit alpha [Cyanothece sp. PCC 7822]
 gi|306985495|gb|ADN17376.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 7822]
          Length = 503

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 9/335 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G  I  G  V   G+    P      GR+++ALG+P+DG 
Sbjct: 60  TIGIALNLEEDNVGAVLMGAGYGIQEGSTVKATGKIAQVPVGEALVGRIVDALGRPVDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GPINTSETRL-LESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTA 178

Query: 177 L-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRK 232
           + +         D + + + +G++   V + + D L +   +  +VVV A +++   L+ 
Sbjct: 179 IAIDTIINQKSEDVICVYVAIGQKASTVAQVV-DTLTEKGAMDYTVVVDANANDPATLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  TIAEYF  KG   L+I D +++ A + R+++      P    YP  VF    R
Sbjct: 238 LAPYTGATIAEYFMYKGKATLVIYDDLSKQAQAYRQLSLLMRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 298 LLERAAKLNDQLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A +   K++   L   + +F E
Sbjct: 358 INAGISVSRVGSAAQTKAMKQVAGKLKLELAQFAE 392


>gi|166367757|ref|YP_001660030.1| F0F1 ATP synthase subunit alpha [Microcystis aeruginosa NIES-843]
 gi|226739912|sp|B0JWV1|ATPA_MICAN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166090130|dbj|BAG04838.1| ATP synthase CF1 alpha chain [Microcystis aeruginosa NIES-843]
          Length = 502

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G  I  G  V   G+    P      GRV++ALG+PIDG 
Sbjct: 60  TVGIALNLEEDNVGAVLMGDGFGIKEGGTVKATGKIAQVPVGDALVGRVVDALGRPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEILASETRL-VESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTA 178

Query: 177 L-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +         D + + + +G++   V + I+       +  +VVV A +++   L+ +
Sbjct: 179 IAIDTIINQKSEDVICVYVAIGQKASTVAQVIDTLTQRGAMDYTVVVAANANDPATLQYI 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T  +IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGASIAEYFMYKGKATLVIYDDLTKQAQAYRQLSLLMRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER          G++TA+  +     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSDALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSTDLFNAGFRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A +   KK+   L   + +F+E
Sbjct: 359 NAGISVSRVGSAAQTKAMKKVAGKLKLELAQFDE 392


>gi|148927614|ref|ZP_01811079.1| Sodium-transporting two-sector ATPase [candidate division TM7
           genomosp. GTL1]
 gi|147887039|gb|EDK72542.1| Sodium-transporting two-sector ATPase [candidate division TM7
           genomosp. GTL1]
          Length = 495

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 152/327 (46%), Gaps = 7/327 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++  L +P+D D    + D +  +  + P  M R  + +   +G+  +D   P+  GQ
Sbjct: 112 GRIVTPLCRPLD-DKGTVRLDDTRPLFYEAPSIMERTMLSEQLPSGVTAVDALFPIVLGQ 170

Query: 163 RIGVFAGSGIGKSTLLSMFA--RSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVV 219
           RI +   +  GKST L      + D    V+  L+G+R  E+   +        +K S+V
Sbjct: 171 RIAILGDTKAGKSTFLGQLGVNQIDTGRIVVYVLIGKRRVEIDRLVATLNQTGAIKHSIV 230

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA   +S     +AP     IAE+    G +V+++ D +T  A   REI+  S   P  
Sbjct: 231 VVANIFDSIAQSYIAPYVGCAIAEHLWYGGRDVIVVYDDLTSHAKVYREISLLSEANPGR 290

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             YP  +F     LLER G        +TA+ +++  GD+    +  S+ SI DG I+ +
Sbjct: 291 DSYPGDMFYAHSSLLERAGKLASSGKTLTALPALVTPGDDITAYLPTSIMSITDGQIIFD 350

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +   +   P V+   SVSR+  +  +  +K++   L   +  + + ++    G     V
Sbjct: 351 LATFRQNIRPAVNTGLSVSRVGGRVQTKRQKEIAGGLFKSLVAYRQAQEFSHFGSE---V 407

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
               ++++    +IYD L+Q P++L S
Sbjct: 408 APDTERSLRLGRLIYDALRQPPAELYS 434


>gi|120600837|ref|YP_965411.1| F0F1 ATP synthase subunit alpha [Shewanella sp. W3-18-1]
 gi|146295038|ref|YP_001185462.1| F0F1 ATP synthase subunit alpha [Shewanella putrefaciens CN-32]
 gi|158512987|sp|A1RQB2|ATPA_SHESW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201679|sp|A4YCI0|ATPA_SHEPC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120560930|gb|ABM26857.1| ATP synthase F1, alpha subunit [Shewanella sp. W3-18-1]
 gi|145566728|gb|ABP77663.1| ATP synthase F1, alpha subunit [Shewanella putrefaciens CN-32]
 gi|319428556|gb|ADV56630.1| ATP synthase F1, alpha subunit [Shewanella putrefaciens 200]
          Length = 513

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  + RQ V +  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGEPIDGKGPIDNDGFSPVEVIA--PGVIERQSVSQPVQTGYKAVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ +   ++  + D   K +   +G++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ E+  L+ +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASEAAALQFLAPYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G    + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERASRVNEIYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|51556908|gb|AAU06224.1| AtpA [Elymus sibiricus]
          Length = 505

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 12/369 (3%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V I  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +
Sbjct: 63  IALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 IASE-SRLIESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPL 236
               +     VI   V  G+R   V + + ++  +   +  +VVA   +SP  L+ +AP 
Sbjct: 182 DTILNQKGQNVICVYVAIGQRASSVAQVVTNFQEEGAMEYTIVVAEMADSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   L   + +F E   ++    +   +D      + +   + 
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKLKLELAQFAE---LQAFAQFASALDKTSQNQLARGRRLR 418

Query: 415 DFLKQSPSD 423
           + LKQS ++
Sbjct: 419 ELLKQSQAN 427


>gi|187917971|ref|YP_001883534.1| V-type ATP synthase subunit B [Borrelia hermsii DAH]
 gi|238689308|sp|B2S1S7|VATB_BORHD RecName: Full=V-type ATP synthase beta chain; AltName:
           Full=V-ATPase subunit B
 gi|119860819|gb|AAX16614.1| V-type sodium ATP synthase subunit B [Borrelia hermsii DAH]
          Length = 433

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 174/361 (48%), Gaps = 12/361 (3%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T ++Q V  G+  + + K++ +L +VI+++ + V +        IS  D V   G   +
Sbjct: 16  ITVMAQNVKYGELAIVKSKDTSSLAEVIKLDREKVSLQVYNGTIGISTADEVKFLGHPMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           ++ S    GR+ +  G P DG   L   D  +EI         R       +TGI +ID+
Sbjct: 76  VTFSENLFGRIFDGAGNPKDGGPRLE--DNLIEIGGPSVNPAKRIVPRNMIRTGIPMIDV 133

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--GD 212
           F  L   Q++ VF+ SG   + LL   A     D +I+  +G +  +  +F  D L  G 
Sbjct: 134 FNTLVESQKLPVFSVSGEPYNELLVRIALQAEVDLIILGGMGLKNDDYLKF-RDSLEKGG 192

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L +++  V T+++  +   + P  ++ +AE F+ +G  VL++L  +T FA +++EIA  
Sbjct: 193 ALSRTIFFVNTANDPVVESLIVPDISLAVAEKFALQGKKVLVLLTDMTNFADAMKEIAIT 252

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
             ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   I 
Sbjct: 253 MEQVPSNRGYPGDLYSQLASRYEKAVDFEG-AGSITILAVTTMPGDDVTHPVPDNTGYIT 311

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           +G   L     + GR  P   L+ + ++ +     D + ++ S+  L    +E+ + + +
Sbjct: 312 EGQYYL-----KGGRIEPFGSLSRLKQMVNGKTRDDHRTIMDSMIKLYASSKESIEKKAM 366

Query: 393 G 393
           G
Sbjct: 367 G 367


>gi|169858607|ref|XP_001835948.1| vacuolar ATP synthase [Coprinopsis cinerea okayama7#130]
 gi|116502965|gb|EAU85860.1| vacuolar ATP synthase [Coprinopsis cinerea okayama7#130]
          Length = 523

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 20/324 (6%)

Query: 60  GQVIRIN--LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +     IV +     G ++    + F     ++  +    GR+ N  G PID   
Sbjct: 73  GQVLEVQGKKAIVQVFEGTSGVDVKATHVEFTGSSMKLPVAEDMLGRIFNGSGNPIDQGP 132

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R   E+  +TGI  ID+   +  GQ+I +F+ +G+  + +
Sbjct: 133 KVFAEDY-LDINGSPINPYSRIYPEEMIQTGISTIDVMNSIARGQKIPIFSAAGLPHNEI 191

Query: 178 LSMFARS---------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
            +   R          D  D       V+ + +G      R F ED+  + +L +  + +
Sbjct: 192 AAQIVRQAGLVKRPTKDVHDGHEDNFSVVFAAMGVNMETARFFKEDFESNGSLDRVTLFL 251

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVAR 280
             +++  I R + P  A+T AEY++ + + +VL+IL  ++ +A ++RE++    E+P  R
Sbjct: 252 NLANDPTIERIITPRLALTTAEYYAYQLEKHVLVILTDMSSYADALREVSAAREEVPGRR 311

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           G+P  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I ++R
Sbjct: 312 GFPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDR 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKA 364
            L     YPP++ L S+SRL   A
Sbjct: 372 QLYNRQIYPPINVLPSLSRLMKSA 395


>gi|290580101|ref|YP_003484493.1| FoF1 membrane-bound proton-translocating ATPase subunit alpha
           [Streptococcus mutans NN2025]
 gi|254997000|dbj|BAH87601.1| FoF1 membrane-bound proton-translocating ATPase alpha subunit
           [Streptococcus mutans NN2025]
          Length = 501

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 160/350 (45%), Gaps = 26/350 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G F + Q   S ++G +I           +G    I  GD V   G+    P      GR
Sbjct: 58  GTFGMAQNLESSDIGIII-----------LGDFNSIREGDTVKRTGKIMEVPVGQSLIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           V+N LG+P+DG   LG+ + +    + +  P  M RQ V +  +TGI+ ID   P+  GQ
Sbjct: 107 VVNPLGQPVDG---LGEIETTATRPVEAAAPGVMQRQSVSEPLQTGIKAIDALVPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVR---EFIEDYLGDNLKKS 217
           R  V      GK+++ +         D + I + +G++   VR   E +  Y    L  +
Sbjct: 164 RELVIGDRQTGKTSIAIDAIINQKGQDMICIYVAIGQKESTVRSQVEVLRKY--GALDYT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VV A++ +   L  +AP   V +AE F   G + L++ D +++ A + RE++      P
Sbjct: 222 IVVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHALIVYDDLSKQAVAYRELSLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG 
Sbjct: 282 GREAYPGDVFYLHSRLLERSAKLSDELGGGSITALPFIETQAGDISAYIATNVISITDGQ 341

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           I L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E
Sbjct: 342 IFLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRE 391


>gi|169260979|gb|ACA52091.1| ATP synthase beta subunit [Blechnum occidentale]
          Length = 290

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 142/283 (50%), Gaps = 20/283 (7%)

Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            GR+ N LG+P+D   +LG  +   +  I    P           F+TGI+V+D+  P  
Sbjct: 7   LGRISNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 63

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211
            G +IG+F G+G+GK+ L++    +       +S+ G  G   RE  + Y+         
Sbjct: 64  RGGKIGLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123

Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
             N+ +S V  V    +E P  R     TA T+AEYF      +V   +D+I RF  +  
Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVPPFIDNIFRFVQAGS 183

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             + LD   VL+R LA +G YP VDPL S S +  + W A E+
Sbjct: 242 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIAGEE 283


>gi|154424909|emb|CAL18557.1| ATP synthase alpha subunit [Streptococcus alactolyticus]
          Length = 367

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 7/308 (2%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD+V   G+    P      GRV+N LG+P+DG   + K   +  + +  P  M R+ V 
Sbjct: 46  GDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI-KTTATRPVEAPAPGVMQRKSVS 104

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TG++ ID   P+  GQR  +      GK+++ +         D + I + +G++  
Sbjct: 105 EPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKES 164

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            VR  +E       L  ++VV A++ +   L  +AP   V +AE F   G +VL++ D +
Sbjct: 165 TVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDL 224

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + RE++      P    YP  VF    RLLER      E   G+ITA+  +    
Sbjct: 225 SKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITAIPFIETQA 284

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  IA +V SI DG I L  +L   G  P +D  +SVSR+   A     KK+  +L 
Sbjct: 285 GDISAYIATNVISITDGQIFLQENLFNSGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLR 344

Query: 378 HLIHRFEE 385
             +  + E
Sbjct: 345 LDLASYRE 352


>gi|15829170|ref|NP_326530.1| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP]
 gi|14090114|emb|CAC13872.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis]
          Length = 468

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 170/347 (48%), Gaps = 20/347 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I+ D V    +   + + +G +V +   +  +        +V + LG  ++  D   K  
Sbjct: 45  ISEDEVRAILIKTSQRVFIGQVVLNTMKKLEVPVGKSSMNKVFDILGNCLN--DKSAKNL 102

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----- 178
           L +EI S +  + N +   +  +TGI+ ID F P+  G ++G+  G+G+GK+ ++     
Sbjct: 103 LKVEIDSTITKSKNLEIKNEILETGIKAIDFFIPILRGSKLGILGGAGVGKTVVMKEIIF 162

Query: 179 --SMF----ARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
             S F    A+ +  +   I +  GER RE  E  ++      L K+V+ ++  +E+P  
Sbjct: 163 NASKFKAPQAQKEKKNTSSIFIGSGERSREGLELYDELKNSKLLDKTVMFISQMNEAPGA 222

Query: 231 RKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R       +T AEY   +  +NVLL +D+I RF  +  E++   G+ P   GY  ++ +E
Sbjct: 223 RMSIVPVGITAAEYLRDREKENVLLFIDNIYRFVQASSEVSATLGKKPSLGGYQPTLDTE 282

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +  + +R+  +    G+IT   +V +  D+  DP A S+ S LD  +VL+R  A +  YP
Sbjct: 283 VSFVHDRLFLN--ANGSITTFETVFLPMDDLTDPSAVSIFSHLDSSMVLSRDQAAKNIYP 340

Query: 350 PVDPLA-SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
             DPLA S S + +K       + +    +++ +++E  DI  I G+
Sbjct: 341 AFDPLASSSSSVNEKIIGTRHFQAILETKNILQKYQELEDIISILGF 387


>gi|282891977|ref|ZP_06300456.1| hypothetical protein pah_c200o157 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498237|gb|EFB40577.1| hypothetical protein pah_c200o157 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 438

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 174/370 (47%), Gaps = 28/370 (7%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           +T  +Q V LG+      ++  ++   V+RI  + V +        IS GD V   GR  
Sbjct: 16  ITVTAQGVSLGELARVDLRDGRHIYASVLRIEGETVTLQVFQNTRGISTGDRVTFLGRQM 75

Query: 94  RISPSACWCGRVINALGKPIDGD-----DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           + S      GR +N  G+PIDG      +S+  G  S   + +V P   R+ V    +T 
Sbjct: 76  QASFGDALLGRRLNGAGEPIDGGPSIVGESINIGAPSFNPVRRVIP---REMV----RTN 128

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208
           I +ID+F  L   Q+I +F+  G   + LL   A     D VIIS +G    + + FI++
Sbjct: 129 IPMIDVFNTLVKSQKIPIFSVPGEPYNQLLMRIANQTDADVVIISGMGLTFADYQAFIDN 188

Query: 209 YL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                ++ K+V+ V  + +  +   + P  A+  AE F+  G +VL+++  +T FA SI+
Sbjct: 189 AEESGSMNKTVMFVHRATDPAVECLLVPDMALACAEKFAVNGKHVLVLMTDMTAFADSIK 248

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EIA    ++P  RGYP S++S+L    E+    E   G+IT V    + GD+   P+ D+
Sbjct: 249 EIAITMDQVPSNRGYPGSLYSDLASRYEKAVLIEG-SGSITIVAVTTMPGDDVTHPVPDN 307

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRF 383
              I +G   L+           +DP  S+SRL      K    D   L +++  L    
Sbjct: 308 TGYITEGQFYLHNK--------QIDPFGSLSRLKQLVIGKETREDHGDLANTMIRLYASS 359

Query: 384 EETRDIRLIG 393
           ++ R+ + +G
Sbjct: 360 KKARERQGMG 369


>gi|253315773|ref|ZP_04838986.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
          Length = 502

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 12/318 (3%)

Query: 66  NLDIVYICP-VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           N+ +V + P  GI E    GD V   GR    P      GRV+N LG+PIDG   +    
Sbjct: 70  NVGVVILGPYTGITE----GDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINITK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E       L  ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSL 376
           R+   A     KK+  +L
Sbjct: 365 RVGGSAQIKAMKKVAGTL 382


>gi|219685291|ref|ZP_03540110.1| V-type ATP synthase beta chain (V-type ATPase subunit B) [Borrelia
           garinii Far04]
 gi|219673064|gb|EED30084.1| V-type ATP synthase beta chain (V-type ATPase subunit B) [Borrelia
           garinii Far04]
          Length = 434

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 180/363 (49%), Gaps = 16/363 (4%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94
           +T  +Q +  G+  + + K++ +L +VI+++ + V +   G    IS  D +   G   +
Sbjct: 16  ITVTAQGIKYGELAIVKAKDTSSLAEVIKLDREKVSLQVYGGTRGISTSDEIKFLGHSMQ 75

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVI 152
           +S S    GR+ +  G P DG  SL   D  +EI    P A   +R+      +TG+ +I
Sbjct: 76  VSFSDNLLGRIFDGSGNPRDGGPSLD--DNLIEIGG--PSANPAKRIVPRNMIRTGLPMI 131

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210
           D+F  L   Q++ +F+ SG   + LL   A     D +I+  +G +  +   F +D L  
Sbjct: 132 DVFNTLVESQKLPIFSVSGEPYNELLLRIALQAEVDLIILGGMGLKHDDYLTF-KDSLEK 190

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           G  L +++  V T+++S +     P  ++++AE F+ +G  VL++L  +T FA +++EI+
Sbjct: 191 GGALSRTIFFVHTANDSVVESLTVPDISLSVAEKFALRGKKVLVLLTDMTNFADAMKEIS 250

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               ++P  RGYP  ++S+L    E+    E   G+IT +    + GD+   P+ D+   
Sbjct: 251 ITMEQVPSNRGYPGDLYSQLAYRYEKAIDFEG-AGSITILAVTTMPGDDVTHPVPDNTGY 309

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I +G   L     + GR  P   L+ + ++ +     D + ++ S+  L    +++ + +
Sbjct: 310 ITEGQYYL-----KGGRIEPFGSLSRLKQMVNGRTRDDHRTIMDSMIKLYASSKDSVEKK 364

Query: 391 LIG 393
            +G
Sbjct: 365 AMG 367


>gi|161511789|emb|CAP16905.1| ATP synthase alpha subunit [Pediococcus inopinatus]
          Length = 341

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 144/314 (45%), Gaps = 11/314 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 28  GMVQNLESNDVGIVILGGYDDIREGDTVKRTGRIMEVPVGDALVGRVVNTLGQPIDGKGE 87

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 88  I-KTDHTRPVERKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 146

Query: 179 --SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESPILRKM 233
             ++  + D     I   +G++   VR   + +E Y    +  ++V+ A   E   +  +
Sbjct: 147 IDTILNQKDQNIICIYVAIGQKESTVRTQVDTLEKY--GAMDYTIVLSAGPSEPAPMLYL 204

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D ++  A + RE++      P    YP  +F    RL
Sbjct: 205 APYAGAAMGEEFMFNGKHVLIVYDDLSEQADAYRELSLILRRPPGREAYPGDIFYTHSRL 264

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  V     +    I  +V SI DG I L+  L   G  P +
Sbjct: 265 LERAAKLNDELGAGSMTALPFVETKAGDIAAYIPTNVISITDGQIFLDSDLFYSGTRPAI 324

Query: 352 DPLASVSRLADKAW 365
           D  +SVSR+   A 
Sbjct: 325 DAGSSVSRVGGDAQ 338


>gi|15837747|ref|NP_298435.1| F0F1 ATP synthase subunit alpha [Xylella fastidiosa 9a5c]
 gi|81623764|sp|Q9PE83|ATPA_XYLFA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|9106109|gb|AAF83955.1|AE003950_5 ATP synthase, alpha chain [Xylella fastidiosa 9a5c]
          Length = 515

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 172/381 (45%), Gaps = 23/381 (6%)

Query: 58  NLGQVIRINLDIVYICPVGIG--EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           N    + +NL+   +  V +G  E +  GD+    GR    P      GRV+NALG+PID
Sbjct: 59  NKTYALALNLERDSVGAVVLGDYEHLREGDIAKTTGRILEVPVGKSLLGRVVNALGEPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG    +  +    P  + R+ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 119 GKGALGPTQ-TAPVERVAPGVIWRKSVNQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 177

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
           + +   ++ ++ D   K +   +G++   +   +      D L  ++VV AT+ ES  L+
Sbjct: 178 TAMAIDTVISQKDTGIKCVYVAIGQKASTIANIVRKLEENDALDHTIVVAATASESAALQ 237

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 238 YISAYAGCTMGEYFMDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 297

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 298 RLLERAARVSEEYVEKFTQGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 357

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++   R++     +   
Sbjct: 358 ETDLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQY---RELAAFAQFASD 414

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
           +D    K + +   + + +KQ
Sbjct: 415 LDETTRKQLERGQRVTELMKQ 435


>gi|330850617|ref|YP_004376498.1| ATP synthase CF1 alpha subunit [Ptilidium pulcherrimum]
 gi|302024746|gb|ADK89592.1| ATP synthase CF1 alpha subunit [Ptilidium pulcherrimum]
          Length = 507

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 7/335 (2%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           + +G  + +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG
Sbjct: 59  NTVGIALNLESDNVGVVLMGDGLAIQEGSSVKATGQIAQIPVSEAYLGRVVNALAQPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+
Sbjct: 119 KGQIAASE-SRLIESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRK 232
            + +    +     VI   V  G++   V + + ++      +  +VVA +  SP  L+ 
Sbjct: 178 AVATDTILNQKGQNVICVYVAIGQKASSVAQVVNNFEERGALEYTIVVAETANSPATLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   +AEYF  +  + L++ D +++ A + R+++      P    YP  VF    R
Sbjct: 238 LAPYTGAALAEYFMYRKQHTLIVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     S+  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 298 LLERAAKLSSKLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A     K++   L   + +F E
Sbjct: 358 INVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 392


>gi|13357689|ref|NP_077963.1| ATP synthase subunit A [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761987|ref|YP_001752215.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920229|ref|ZP_02931602.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508767|ref|ZP_02689916.2| ATP synthase F1, alpha subunit homolog [Ureaplasma parvum serovar
           14 str. ATCC 33697]
 gi|81624433|sp|Q9PR12|ATPA_UREPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358202|sp|B1AIC1|ATPA_UREP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|11356743|pir||C82929 ATP synthase alpha chain UU132 [imported] - Ureaplasma urealyticum
 gi|6899091|gb|AAF30538.1|AE002114_5 ATP synthase alpha chain [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827564|gb|ACA32826.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902623|gb|EDT48912.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182675704|gb|EDT87609.1| ATP synthase F1, alpha subunit homolog [Ureaplasma parvum serovar
           14 str. ATCC 33697]
          Length = 799

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 176/380 (46%), Gaps = 32/380 (8%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  + +  D V +  +G    I  GD V+   R    P      GRV++ALGK +D   +
Sbjct: 62  GMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDALGKAVDNKGN 121

Query: 119 LGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +     S  ++ K+ P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+T+
Sbjct: 122 IVANKFS--VIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTI 179

Query: 178 -----LSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
                ++   R+ +C    +   +G++   +   + +      ++ + VV A + E P L
Sbjct: 180 AIDAIINQKGRNVNC----VYVAIGQKNSTIANVVRELEAHGAMEYTTVVTANASELPAL 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP T VTIAE +  +G +VL++ D +++ A + R ++      P    YP  VF   
Sbjct: 236 QYIAPFTGVTIAEEWMHQGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    + E   G+ITA+  +     + +  I  +V SI DG I +  SL   G+ 
Sbjct: 296 SRLLERACKLKDELGAGSITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAGQR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD------LI 402
           P +D   SVSR+   A     K+  +SL   +  +   R++     +   +D      L 
Sbjct: 356 PAIDAGQSVSRVGSAAQIKSVKQTGASLKLELANY---RELEAFSQFGSDLDDETKRILK 412

Query: 403 LDKAVHQVPIIYDFLKQSPS 422
           L KAV  V      +KQ+P+
Sbjct: 413 LGKAVMAV------IKQAPN 426


>gi|294638353|ref|ZP_06716606.1| ATP synthase F1, alpha subunit [Edwardsiella tarda ATCC 23685]
 gi|291088606|gb|EFE21167.1| ATP synthase F1, alpha subunit [Edwardsiella tarda ATCC 23685]
          Length = 513

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158
           GRV+N LG+PIDG     KG +  +  S V    P  + RQ V++  +TG + +D   P+
Sbjct: 105 GRVVNTLGEPIDG-----KGPVEHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPI 159

Query: 159 CHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDN 213
             GQR  +      GK+ L   ++  + D   K I   +G++   +   +   E++    
Sbjct: 160 GRGQRELIIGDRQTGKTALAVDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L  ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+   
Sbjct: 218 LANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLL 277

Query: 274 GELPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNH 320
              P    +P  VF    RLLER              G  + + G++TA+  +     + 
Sbjct: 278 RRPPGREAFPGDVFYLHSRLLERAARVNADYVEAFTKGEIKGQTGSLTALPIIETQAGDV 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   +
Sbjct: 338 SAFVPTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTAL 397

Query: 381 HRFEE 385
            ++ E
Sbjct: 398 AQYRE 402


>gi|284051759|ref|ZP_06381969.1| F0F1 ATP synthase subunit alpha [Arthrospira platensis str. Paraca]
          Length = 505

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 152/334 (45%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G EI  G  V   GR    P      GRVI++LG+PIDG 
Sbjct: 60  TVGIALNLEEDNVGAVLMGEGLEIQEGSAVTATGRIAQVPVGEAMLGRVIDSLGRPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   D  + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GDIQASDTRL-LESPAPGIIERRSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 L-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +         D + + + +G++   V + +        L  ++VV A + +   L+ +
Sbjct: 179 IAIDTIINQKEEDVICVYVAIGQKASTVAQVVSTLEEKGALPYTIVVAANASDPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +G   L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAAMAEYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V
Sbjct: 299 LERAAKLNDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAV 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A +   KK+   +   + +F E
Sbjct: 359 NAGISVSRVGSAAQTKAMKKVAGKVKLELAQFAE 392


>gi|28202156|ref|NP_777397.1| ATP synthase CF1 alpha subunit [Anthoceros formosae]
 gi|48474822|sp|Q85AU2|ATPA_ANTFO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|27807858|dbj|BAC55333.1| ATPase alpha subunit [Anthoceros formosae]
 gi|27807959|dbj|BAC55424.1| ATPase alpha subunit [Anthoceros formosae]
          Length = 507

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG 
Sbjct: 60  TVGIALNLESDNVGVVLMGDGLSIQEGSSVEATGKIAQIPVSDAYLGRVVNALAQPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GQIPAYEFRL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +    +     VI   V  G++   V + +  +     L+ ++VV  T+D    L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVNTFEERGALEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S+  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++   L   + +F E
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 392


>gi|288817573|ref|YP_003431920.1| ATP synthase F1 alpha subunit [Hydrogenobacter thermophilus TK-6]
 gi|288786972|dbj|BAI68719.1| ATP synthase F1 alpha subunit [Hydrogenobacter thermophilus TK-6]
 gi|308751173|gb|ADO44656.1| ATP synthase F1, alpha subunit [Hydrogenobacter thermophilus TK-6]
          Length = 503

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 182/409 (44%), Gaps = 22/409 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           +  I  VYY    +++   L + + ++     S  +G    +  D V I  +G    I  
Sbjct: 26  MEEIGVVYYVGDGVARAYGLDNVMANELVEFESGVMGLAFNLEEDNVGIIILGSESGIKE 85

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNR 138
           G +V   GR   +P      GRVI+ LG P+DG     KG +  E  S +    P  + R
Sbjct: 86  GSVVRRTGRILDAPVGEGLIGRVIDPLGNPLDG-----KGPIKYEYRSPIEKIAPGVVKR 140

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVG 196
           + V +  +TGI+ ID   P+  GQR  +      G++T+   ++  + D     I   +G
Sbjct: 141 KSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRSTGRTTICIDTILNQRDTDVYCIYVAIG 200

Query: 197 ERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           ++       IE  L  N  +  + VVVA++ +   L+ +AP    TI EYF   G + L+
Sbjct: 201 QKRSTTARIIE-LLEKNGAMDYTCVVVASATDPASLQYLAPFVGCTIGEYFRDNGKHALV 259

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    YP  VF    RLLER      E   G++TA+  
Sbjct: 260 IYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHSRLLERAAKLNDELGAGSLTALPI 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     +    I  +V SI DG I L   L  +G  P ++   SVSR+   A     K++
Sbjct: 320 IETKAGDVAAYIPTNVISITDGQIYLEPDLFNKGVRPAINVGLSVSRVGGAAQIKAMKQV 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             +L   + +F   R++     +   +D    + +++   + + LKQ P
Sbjct: 380 AGTLRLDLAQF---RELEAFVQFAAELDKATQQTINRGLRLVELLKQEP 425


>gi|257042577|gb|ACV32849.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL  PIDG 
Sbjct: 60  TVGIALNLGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAXPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GQISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G+R   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S+  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     KK+   L   + +F E
Sbjct: 359 NVGLSVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|190407685|gb|ACE78271.1| vacuolar ATPase B subunit [Bombyx mori]
          Length = 494

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 102 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 160

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     KV               + + +G 
Sbjct: 161 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKSVLDDHEDNFAIVFAAMGV 220

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 221 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 280

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 281 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 340

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 341 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 389


>gi|99640619|emb|CAJ45096.1| putative beta subunit of chloroplast ATP synthase [Plagiogyria
           glauca]
          Length = 354

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 135/264 (51%), Gaps = 17/264 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG F G+G GK+ L++    +       +S+ G  G   RE
Sbjct: 8   FETGIKVVDLLAPYRRGGKIGSFGGAGAGKTVLITELINNIAKAHGGVSVSGGVGERTRE 67

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V   ++E P  R     TA T+AEY       +V
Sbjct: 68  GNDLYMETKESKVINEQNISESKVALVYGQTNEPPGARTRVGSTAPTMAEYSRDVNKQDV 127

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
            L +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 128 PLFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQA 185

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-- 370
           V V  D+  DP   +  + LD   VL+R  A +G YP VDPL S S +  + W   E+  
Sbjct: 186 VYVPADDPTDPAPATTFAHLDATTVLSRGSAAKGTYPAVDPLDSTSTML-QPWIVGEEHY 244

Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394
           +    +   + R++E +DI  I G
Sbjct: 245 ETAQGVKQTLQRYKEPQDIIAIPG 268


>gi|317494641|ref|ZP_07953053.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917243|gb|EFV38590.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 513

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 21/301 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   +     S  + +  P  + RQ V++  +TG + +D   P+  GQ
Sbjct: 105 GRVVNTLGEPIDGKGPVDNDGFSA-VEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQ 163

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKS 217
           R  V      GK+ L   ++  + D   K I   +G++   +   +   E++    L  +
Sbjct: 164 RELVIGDRQTGKTALAVDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEH--GALANT 221

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P
Sbjct: 222 IVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPP 281

Query: 278 VARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPI 324
               +P  VF    RLLER              G  +   G++TA+  +     + +  +
Sbjct: 282 GREAFPGDVFYLHSRLLERAARVNAEYVEAYTKGEVKGATGSLTALPIIETQAGDVSAFV 341

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++ 
Sbjct: 342 PTNVISITDGQIFLESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYR 401

Query: 385 E 385
           E
Sbjct: 402 E 402


>gi|125624727|ref|YP_001033210.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|146286054|sp|A2RMI4|ATPA_LACLM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|6048351|gb|AAF02206.1|AF059739_6 H+-ATPase cytoplasmic F1-part alpha-subunit [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|15963435|dbj|BAB69469.1| H+-ATPase alpha subunit [Lactococcus lactis subsp. lactis]
 gi|124493535|emb|CAL98516.1| ATP synthase alpha chain [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071524|gb|ADJ60924.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 500

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 11/329 (3%)

Query: 66  NLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   +  + +G+ +S+  GD V   G+   I       GRV+N LG+P+DG   L  G
Sbjct: 65  NLDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTG 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
             +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++ +   
Sbjct: 125 K-TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAI 183

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTA 238
                 D + I + +G++   VR  +E    LG      VV  + S  SP+L  +AP   
Sbjct: 184 LNQKGQDMICIYVAIGQKESTVRTQVETLRKLGAMDYTIVVTASASQPSPLLY-IAPYAG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER  
Sbjct: 243 AAMGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +S
Sbjct: 303 KLSDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VSR+   A     KK+  +L   +  F E
Sbjct: 363 VSRVGGAAQIKAMKKVAGTLRLDLASFRE 391


>gi|299537990|ref|ZP_07051276.1| ATP synthase subunit alpha [Lysinibacillus fusiformis ZC1]
 gi|298726572|gb|EFI67161.1| ATP synthase subunit alpha [Lysinibacillus fusiformis ZC1]
          Length = 502

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ IV + P     +I  GD V   GR    P      GRV+N LG+P+DG   +     
Sbjct: 70  NVGIVILGPY---TDIKEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVDGQGPINTTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           S  I S     M R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++  
Sbjct: 126 SRPIESPAFGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V++
Sbjct: 186 QNDQNMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLFLAPFAGVSM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 AEEFMLQGKHVLIVYDDLSKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 K--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 ETYQNGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFNSGVRPAINAGLSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  F E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLAAFRELESFAQFG 399


>gi|17136796|ref|NP_476908.1| vacuolar H[+]-ATPase 55kD B subunit, isoform B [Drosophila
           melanogaster]
 gi|24646341|ref|NP_731726.1| vacuolar H[+]-ATPase 55kD B subunit, isoform A [Drosophila
           melanogaster]
 gi|281361666|ref|NP_001163597.1| vacuolar H[+]-ATPase 55kD B subunit, isoform C [Drosophila
           melanogaster]
 gi|194764831|ref|XP_001964531.1| GF23001 [Drosophila ananassae]
 gi|194901678|ref|XP_001980379.1| GG17111 [Drosophila erecta]
 gi|195110565|ref|XP_001999850.1| GI24752 [Drosophila mojavensis]
 gi|195450853|ref|XP_002072660.1| GK13566 [Drosophila willistoni]
 gi|195500542|ref|XP_002097416.1| GE24501 [Drosophila yakuba]
 gi|401325|sp|P31409|VATB_DROME RecName: Full=V-type proton ATPase subunit B; Short=V-ATPase
           subunit B; AltName: Full=V-ATPase 55 kDa subunit;
           AltName: Full=Vacuolar proton pump subunit B
 gi|8810|emb|CAA48034.1| vacuolar ATPase B subunit [Drosophila melanogaster]
 gi|7299652|gb|AAF54836.1| vacuolar H[+]-ATPase 55kD B subunit, isoform A [Drosophila
           melanogaster]
 gi|7299653|gb|AAF54837.1| vacuolar H[+]-ATPase 55kD B subunit, isoform B [Drosophila
           melanogaster]
 gi|15291557|gb|AAK93047.1| GH27148p [Drosophila melanogaster]
 gi|25009768|gb|AAN71057.1| AT12604p [Drosophila melanogaster]
 gi|190614803|gb|EDV30327.1| GF23001 [Drosophila ananassae]
 gi|190652082|gb|EDV49337.1| GG17111 [Drosophila erecta]
 gi|193916444|gb|EDW15311.1| GI24752 [Drosophila mojavensis]
 gi|194168745|gb|EDW83646.1| GK13566 [Drosophila willistoni]
 gi|194183517|gb|EDW97128.1| GE24501 [Drosophila yakuba]
 gi|220945750|gb|ACL85418.1| Vha55-PA [synthetic construct]
 gi|220955454|gb|ACL90270.1| Vha55-PA [synthetic construct]
 gi|272476951|gb|ACZ94894.1| vacuolar H[+]-ATPase 55kD B subunit, isoform C [Drosophila
           melanogaster]
          Length = 490

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 20/290 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 98  LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 156

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----------------SDCFDKVIISLVG 196
           D+   +  GQ+I +F+ +G+  + + +   R                +D F  ++ + +G
Sbjct: 157 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHTDNF-AIVFAAMG 215

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLL 254
                 R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+
Sbjct: 216 VNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLV 275

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + 
Sbjct: 276 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILT 335

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +  D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 336 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 385


>gi|294792755|ref|ZP_06757902.1| ATP synthase F1, alpha subunit [Veillonella sp. 6_1_27]
 gi|294456654|gb|EFG25017.1| ATP synthase F1, alpha subunit [Veillonella sp. 6_1_27]
          Length = 512

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 7/332 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V+ + LD V    +G    I  GD V   G+    P+     GRV+N LG+P+DG  +
Sbjct: 61  GLVLNLELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLDGKGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + +      I    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK+ + 
Sbjct: 121 I-QATERRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGKTAIA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
           L         D + I + +G++   V   ++       ++ ++VV A++     L+ +AP
Sbjct: 180 LDTILNQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQYIAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    RLLE
Sbjct: 240 YAGVAMGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     SE   G+ITA+  +     + +  I  +V SI DG I L   +   G  P VD 
Sbjct: 300 RAAKLSSELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRPAVDV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+   A +   K++   L   + ++ E
Sbjct: 360 GLSVSRVGGSAQTKAMKQVAGQLRLDLAQYRE 391


>gi|291543822|emb|CBL16931.1| ATP synthase F1 subcomplex alpha subunit [Ruminococcus sp. 18P13]
          Length = 504

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 160/345 (46%), Gaps = 17/345 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G   +I  G  V   GR    P      GRV+NALG+PIDG  +
Sbjct: 61  GMALNLEQDFVGAVMLGSDRDIKEGAAVKRTGRIVSVPVGEELLGRVVNALGQPIDGKGA 120

Query: 119 LGKGDLSMEI--MSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           +    L+ E   + KV   +  R+ V K  +TGI+ ID   P+  GQR  +      GK 
Sbjct: 121 I----LTHETAPVEKVASGIITRKSVHKPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK- 175

Query: 176 TLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           T +++    +  DK +I +   +G++   V   +E       ++ ++VV AT+ E   L+
Sbjct: 176 TAIALDTIINQHDKDVICIYVAIGQKRSTVANVVETLEKAGAMRYTIVVSATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF ++G +VL + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFLAQGKDVLCVYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK---GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           RLLER   S  EK   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 296 RLLER-ACSLNEKYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGVR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           P V+P  SVSR+   A     KK+  SL     ++ E +     G
Sbjct: 355 PAVNPGISVSRVGSAAQIKAMKKVSGSLKLSYSQYRELQAFSQFG 399


>gi|209525757|ref|ZP_03274293.1| ATP synthase F1, alpha subunit [Arthrospira maxima CS-328]
 gi|209493730|gb|EDZ94049.1| ATP synthase F1, alpha subunit [Arthrospira maxima CS-328]
          Length = 505

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 152/334 (45%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G EI  G  V   GR    P      GRVI++LG+PIDG 
Sbjct: 60  TVGIALNLEEDNVGAVLMGEGLEIQEGSAVTATGRIAQVPVGEAMLGRVIDSLGRPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   D  + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GDIQASDTRL-LESPAPGIIERRSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 L-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           + +         D + + + +G++   V + +        L  ++VV A + +   L+ +
Sbjct: 179 IAIDTIINQKEEDVICVYVAIGQKASTVAQVVSTLEEKGALPYTIVVAANASDPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +G   L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAAMAEYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V
Sbjct: 299 LERAAKLNDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAV 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A +   KK+   +   + +F E
Sbjct: 359 NAGISVSRVGSAAQTKAMKKVAGKVKLELAQFAE 392


>gi|166033114|ref|ZP_02235943.1| hypothetical protein DORFOR_02836 [Dorea formicigenerans ATCC
           27755]
 gi|166027471|gb|EDR46228.1| hypothetical protein DORFOR_02836 [Dorea formicigenerans ATCC
           27755]
          Length = 502

 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 6/290 (2%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
           + GRVINALG PIDG   + + D    I ++ P  ++R+ V    +TGI  ID   P+  
Sbjct: 104 FIGRVINALGAPIDGAGEI-EADDYRPIENEAPGIIDRKSVSVPMETGILSIDSMFPIGR 162

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV--GERGREVREFIEDY-LGDNLKKS 217
           GQR  +      GK+++ +    +   + VI   V  G++   + + +  +     +  +
Sbjct: 163 GQRELIIGDRQTGKTSIATDTILNQNGNGVICIYVAIGQKASTISKVVNTFKTSGAMDHT 222

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V+ +T+ +   L+ +AP     +AEYF  KG +VL++ D +++ A + R ++   G  P
Sbjct: 223 IVLASTASDCAPLQYIAPYAGTALAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLGRSP 282

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER     +EK  G+ITA+  +     + +  I  +V SI DG 
Sbjct: 283 GREAYPGDVFYLHSRLLERSSRLSEEKGGGSITALPIIETQAGDVSAYIPTNVISITDGQ 342

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           I L  SL   G  P V+   SVSR+   A +   KK   SL   + ++ E
Sbjct: 343 IFLESSLFFSGMRPAVNVGLSVSRVGGDAQTKAMKKAAGSLRIDLAQYRE 392


>gi|307174076|gb|EFN64763.1| Vacuolar ATP synthase subunit B [Camponotus floridanus]
          Length = 495

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 103 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 161

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     KV               + + +G 
Sbjct: 162 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKSVLDSHEDNFAIVFAAMGV 221

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 222 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 281

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 282 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 341

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 342 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 390


>gi|294794507|ref|ZP_06759643.1| ATP synthase F1, alpha subunit [Veillonella sp. 3_1_44]
 gi|294454837|gb|EFG23210.1| ATP synthase F1, alpha subunit [Veillonella sp. 3_1_44]
          Length = 512

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 7/332 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V+ + LD V    +G    I  GD V   G+    P+     GRV+N LG+P+DG  +
Sbjct: 61  GLVLNLELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLDGKGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + +      I    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK+ + 
Sbjct: 121 I-QATERRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGKTAIA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
           L         D + I + +G++   V   ++       ++ ++VV A++     L+ +AP
Sbjct: 180 LDTILNQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQYIAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    RLLE
Sbjct: 240 YAGVAMGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     SE   G+ITA+  +     + +  I  +V SI DG I L   +   G  P VD 
Sbjct: 300 RAAKLSSELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRPAVDV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+   A +   K++   L   + ++ E
Sbjct: 360 GLSVSRVGGSAQTKAMKQVAGQLRLDLAQYRE 391


>gi|156598737|gb|ABU85623.1| ATP synthase CF1 alpha subunit [Scaevola aemula]
          Length = 504

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 168/372 (45%), Gaps = 10/372 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGNGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISSSEYRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +  +      +  +VVA +  SP  L+ +
Sbjct: 179 VATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETAASPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++   L   + +F E   +     +   +D      + +  
Sbjct: 359 NVGLSVSRVGSAAQIKAMKQVAGKLKLELAQFAE---LEAFAQFASALDKAAQNQLARGQ 415

Query: 412 IIYDFLKQSPSD 423
            + + LKQS SD
Sbjct: 416 RLRELLKQSQSD 427


>gi|148298717|ref|NP_001091828.1| vacuolar ATP synthase subunit B [Bombyx mori]
 gi|118500417|gb|ABK97410.1| vacuolar ATP synthase subunit B [Bombyx mori]
          Length = 490

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 102 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 160

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     KV               + + +G 
Sbjct: 161 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKSVLDDHEDNFAIVFAAMGV 220

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 221 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 280

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 281 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 340

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 341 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 389


>gi|325291356|ref|YP_004267537.1| ATP synthase F1 subcomplex alpha subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966757|gb|ADY57536.1| ATP synthase F1 subcomplex alpha subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 502

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 157/344 (45%), Gaps = 32/344 (9%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPI 113
             DN+G VI           +G  E I  GD V   GR    P      GRV+N LG+P+
Sbjct: 67  EEDNIGCVI-----------LGPYETIKEGDQVKRTGRIMEVPVGDALIGRVVNVLGQPL 115

Query: 114 DGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           DG     KG+++      I S  P  ++R+ V +  +TG++ ID   P+  GQR  +   
Sbjct: 116 DG-----KGEIAASGYRPIESNAPGVVDRKSVHEPLQTGLKSIDSMVPIGRGQRELIIGD 170

Query: 170 SGIGKS-----TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
              GK+     T+++   + DC    I   +G++   V   ++       ++ S+VVVAT
Sbjct: 171 RQTGKTAVAVDTIINQKGQ-DCI--CIYVAIGQKQSTVASVVKKLEEHGAMEYSLVVVAT 227

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   +  +AP +   + EYF   G +VL+I D +T+ A + RE++      P    YP
Sbjct: 228 ASEPAPMLYIAPYSGCAMGEYFRDNGKHVLIIYDDLTKQAVAYRELSLLLKRPPGREAYP 287

Query: 284 TSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      EK  G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 288 GDVFYLHSRLLERAAKLSPEKGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLESD 347

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           L   G  P ++   SVSR+   A     K++   L   +  + E
Sbjct: 348 LFNSGFRPAINVGISVSRVGGSAQIKAMKQVAGQLRLDLASYRE 391


>gi|321476668|gb|EFX87628.1| hypothetical protein DAPPUDRAFT_306451 [Daphnia pulex]
          Length = 499

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 18/279 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N  GKPID   ++   D  ++I  +     +R   E+  +TGI  IDI   +  GQ
Sbjct: 115 GRVFNGSGKPIDKGPTVLAEDF-LDIQGQPINPHSRIYPEEMIQTGISAIDIMNSIARGQ 173

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGERGREVREFIE 207
           +I +F+ +G+  + + +   R     KV               + + +G      R F +
Sbjct: 174 KIPIFSAAGLPHNEIAAQICRQGGLVKVPGKSVLDDHDDNFAIVFAAMGVNMETARFFKQ 233

Query: 208 DYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265
           D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+IL  ++ +A +
Sbjct: 234 DFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVILTDMSSYAEA 293

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
           +RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +  D+   PI 
Sbjct: 294 LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIP 353

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 354 DLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 392


>gi|282849841|ref|ZP_06259225.1| ATP synthase F1, alpha subunit [Veillonella parvula ATCC 17745]
 gi|282580778|gb|EFB86177.1| ATP synthase F1, alpha subunit [Veillonella parvula ATCC 17745]
          Length = 512

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 7/332 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V+ + LD V    +G    I  GD V   G+    P+     GRV+N LG+P+DG  +
Sbjct: 61  GLVLNLELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLDGKGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + +      I    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK+ + 
Sbjct: 121 I-QATERRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGKTAIA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
           L         D + I + +G++   V   ++       ++ ++VV A++     L+ +AP
Sbjct: 180 LDTILNQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQYIAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    RLLE
Sbjct: 240 YAGVAMGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     SE   G+ITA+  +     + +  I  +V SI DG I L   +   G  P VD 
Sbjct: 300 RAAKLSSELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRPAVDV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
             SVSR+   A +   K++   L   + ++ E
Sbjct: 360 GLSVSRVGGSAQTKAMKQVAGQLRLDLAQYRE 391


>gi|161511851|emb|CAP16936.1| ATP synthase alpha subunit [Pediococcus damnosus]
          Length = 309

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 147/309 (47%), Gaps = 9/309 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 1   GMVQNLESNDVGIVILGNYDDIREGDTVKRTGRIMEVPVGDALIGRVVNTLGQPIDGKGE 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 61  I-KTDHTRPVEHKAPGVMERQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLA 119

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIE--DYLGDNLKKSVVVVATSDESPILRKMA 234
             ++  + D     I   +G++   VR  +E  +  G      V+    S+ +P+L  +A
Sbjct: 120 IDTILNQKDQNIICIYVAIGQKESTVRTQVEALEKFGAMDYTIVLSAGPSEPAPMLY-LA 178

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G +VL++ D +++ A + RE++      P    YP  +F    RLL
Sbjct: 179 PYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLL 238

Query: 295 ERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER    S+K   G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D
Sbjct: 239 ERAAKLSDKLGAGSMTALPFVETKAGDISAYIPTNVISITDGQIFLDSDLFYSGTRPAID 298

Query: 353 PLASVSRLA 361
             +SVSR+ 
Sbjct: 299 AGSSVSRVG 307


>gi|12045263|ref|NP_073074.1| F0F1 ATP synthase subunit alpha [Mycoplasma genitalium G37]
 gi|255660086|ref|ZP_05405495.1| F0F1 ATP synthase subunit alpha [Mycoplasma genitalium G37]
 gi|1352027|sp|P47641|ATPA_MYCGE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|3844993|gb|AAC71629.1| ATP synthase F1, alpha subunit [Mycoplasma genitalium G37]
 gi|166078840|gb|ABY79458.1| ATP synthase F1, alpha subunit [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 518

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 143/295 (48%), Gaps = 14/295 (4%)

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM----EIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
              GR++NALG+ IDG     +GD+      +I    P  M R+ V +  +TGI  ID  
Sbjct: 102 VMLGRIVNALGEAIDG-----RGDIKATEYDQIEKIAPGVMKRKSVNQPLETGILTIDAL 156

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGD 212
            P+  GQR  +      GK+ +   ++  + D     +   +G++   V + +    + D
Sbjct: 157 FPIGKGQRELIVGDRQTGKTAIAIDTIINQKDKDVYCVYVAIGQKNSSVAQIVHQLEVND 216

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
           ++K + VV AT+ +S  +  ++P T +TIAEY+  KG +VL++ D +++ A + R ++  
Sbjct: 217 SMKYTTVVCATASDSDSMVYLSPFTGITIAEYWLKKGKDVLIVFDDLSKHAVAYRTLSLL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      E   G+ITA+  +     + +  I  +V S
Sbjct: 277 LKRPPGREAFPGDVFYLHSRLLERACKLNDENGGGSITALPIIETQAGDISAYIPTNVIS 336

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           I DG + +  SL   G+ P +    SVSR+   A +   K+   SL   + ++ E
Sbjct: 337 ITDGQLFMVSSLFNAGQRPAIQIGLSVSRVGSAAQTKAIKQQTGSLKLELAQYSE 391


>gi|186701980|ref|ZP_02554410.2| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|186700746|gb|EDU19028.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 799

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 176/380 (46%), Gaps = 32/380 (8%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  + +  D V +  +G    I  GD V+   R    P      GRV++ALGK +D   +
Sbjct: 62  GMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDALGKAVDNKGN 121

Query: 119 LGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +     S  ++ K+ P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+T+
Sbjct: 122 IVANKFS--VIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTI 179

Query: 178 -----LSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
                ++   R+ +C    +   +G++   +   + +      ++ + VV A + E P L
Sbjct: 180 AIDAIINQKGRNVNC----VYVAIGQKNSTIANVVRELEAHGAMEYTTVVTANASELPAL 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP T VTIAE +  +G +VL++ D +++ A + R ++      P    YP  VF   
Sbjct: 236 QYIAPFTGVTIAEEWMHQGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    + E   G+ITA+  +     + +  I  +V SI DG I +  SL   G+ 
Sbjct: 296 SRLLERACKLKDELGAGSITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAGQR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD------LI 402
           P +D   SVSR+   A     K+  +SL   +  +   R++     +   +D      L 
Sbjct: 356 PAIDAGQSVSRVGSAAQIKSVKQTGASLKLELANY---RELEAFSQFGSDLDDETKRILK 412

Query: 403 LDKAVHQVPIIYDFLKQSPS 422
           L KAV  V      +KQ+P+
Sbjct: 413 LGKAVMAV------IKQAPN 426


>gi|14718052|gb|AAK72767.1| ATP synthase beta subunit [Ficus sp. Soltis s.n.]
          Length = 375

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 15/263 (5%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 34  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 93

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T   YF      +V
Sbjct: 94  GNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTXXXYFRDVNXQDV 153

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 154 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 211

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  +
Sbjct: 212 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 271

Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394
               +   + R++E +DI  I G
Sbjct: 272 TAQRVKQTLQRYKELQDIIAILG 294


>gi|326391017|ref|ZP_08212566.1| ATP synthase F1, alpha subunit [Thermoanaerobacter ethanolicus JW
           200]
 gi|325992962|gb|EGD51405.1| ATP synthase F1, alpha subunit [Thermoanaerobacter ethanolicus JW
           200]
          Length = 506

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 170/364 (46%), Gaps = 26/364 (7%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
           +G V+ +  D V +  +G  E++  GD+V   GR    P      GRV+N LG+PIDG  
Sbjct: 60  VGMVLNLEEDTVGVVVLGDPEKVKEGDIVKRTGRIMEVPVGKEMLGRVVNPLGEPIDG-- 117

Query: 118 SLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
              KG ++ E    I    PP + R+ V+   +TGI  ID   P+  GQR  +      G
Sbjct: 118 ---KGPINYETKRPIEYPAPPIVRRKSVDTPLQTGILAIDSMIPIGRGQRELIIGDRQTG 174

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVR---EFIEDYLGDNLKKSVVVVATSDESP 228
           K+ +   ++  + D     I   +G++   V      +E Y    ++ + VV +T+ +S 
Sbjct: 175 KTAIAIDTIINQKDKGVYCIYVAIGQKASTVAGIVNMLEKY--GAMEYTTVVASTASDSA 232

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP     + E+F  +G +VL++ D +++ A + R I+      P    YP  VF 
Sbjct: 233 ALQYIAPYAGCAMGEHFMYQGKDVLVVYDDLSKHAIAYRTISLLLRRPPGREAYPGDVFY 292

Query: 289 ELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L   G
Sbjct: 293 LHSRLLERSARLADEYGGGSLTALPIVETLAGDISAYIPTNVISITDGQIYLESELFYSG 352

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     KK+   L   + ++   R++++    R G D  LDKA
Sbjct: 353 IRPAINVGLSVSRVGGAAQIKAMKKVAGRLRLELSQY---RELQVFA--RFGSD--LDKA 405

Query: 407 VHQV 410
             +V
Sbjct: 406 TLEV 409


>gi|255525817|ref|ZP_05392746.1| ATP synthase F1, alpha subunit [Clostridium carboxidivorans P7]
 gi|255510460|gb|EET86771.1| ATP synthase F1, alpha subunit [Clostridium carboxidivorans P7]
          Length = 504

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 162/337 (48%), Gaps = 9/337 (2%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPID 114
           +D  G  + +  D V    +G  + I  GD+V   G+    P      GRV+N+LG+PID
Sbjct: 57  NDVYGMSLNLEQDNVGCVLLGSEKGIKEGDIVKRTGKVVEVPVGDAIVGRVVNSLGQPID 116

Query: 115 GDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           G   +   +  ++EI  K P  + RQ V++  +TGI+ ID F P+  GQR  +      G
Sbjct: 117 GKGPIKTAETRAVEI--KAPGVIQRQSVKQPLQTGIKAIDSFIPIGKGQRELIIGDRQTG 174

Query: 174 KSTLLS-MFARSDCFDKVIISL-VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPIL 230
           K+ + +         D + I + +G++   V   + +      +  +++V +++ E+  L
Sbjct: 175 KTAIATDTIINQKGKDVICIYVAIGQKQSTVAHIVNNLTEAGAMDYTIIVSSSASETAPL 234

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP    T+ EYF  +G +VL+I D +++ A + R ++      P    +P  VF   
Sbjct: 235 QYIAPYAGCTMGEYFMHQGKDVLIIYDDLSKHAVAYRTMSLLLRRAPGREAFPGDVFYLH 294

Query: 291 PRLLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER    S+K   G++TA+  +     +    I  +V SI DG I L   L   G+ 
Sbjct: 295 SRLLERAAKLSDKLGGGSLTALPIIETQAGDVTAYIPTNVISITDGQIFLESELFNAGQR 354

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           P V+   SVSR+   A     K++  +L   + ++ E
Sbjct: 355 PAVNAGISVSRVGGNAQIKAMKQVSGTLKLDLAQYRE 391


>gi|261208730|ref|ZP_05923167.1| sodium-transporting two-sector ATPase [Enterococcus faecium TC 6]
 gi|289565586|ref|ZP_06446033.1| V-type sodium ATPase catalytic subunit A [Enterococcus faecium
           D344SRF]
 gi|260077232|gb|EEW64952.1| sodium-transporting two-sector ATPase [Enterococcus faecium TC 6]
 gi|289162668|gb|EFD10521.1| V-type sodium ATPase catalytic subunit A [Enterococcus faecium
           D344SRF]
          Length = 593

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQVAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ SLA
Sbjct: 361 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWATMVTEGMRILQEEQQLNEIVRLVG 478


>gi|283794953|ref|YP_003359344.1| ATPase alpha subunit [Olea europaea]
 gi|330850728|ref|YP_004376406.1| ATP synthase CF1 alpha subunit [Olea europaea subsp. europaea]
 gi|281428672|gb|ADA69911.1| ATPase alpha subunit [Olea europaea]
 gi|291059238|gb|ADD72074.1| ATP synthase CF1 alpha subunit [Olea europaea]
 gi|328795418|emb|CBR30299.1| ATP synthase CF1 alpha subunit [Olea europaea subsp. europaea]
          Length = 507

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 155/334 (46%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISASE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +         +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++   L   + +F E
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 392


>gi|260774526|ref|ZP_05883439.1| ATP synthase alpha chain [Vibrio metschnikovii CIP 69.14]
 gi|260610432|gb|EEX35638.1| ATP synthase alpha chain [Vibrio metschnikovii CIP 69.14]
          Length = 513

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 30/351 (8%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD 116
           N    + +  D V    +G   ++S G  V   GR    P      GRV+N LG PIDG 
Sbjct: 59  NFALALNLERDSVGAVVMGPYTDLSEGMKVTSTGRILEVPVGPELLGRVVNTLGVPIDG- 117

Query: 117 DSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KG +  ++ S V    P  ++R+ V++  +TG + +D   P+  GQR  +      
Sbjct: 118 ----KGPIDAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQT 173

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDES 227
           GK+ L   ++  + D     I   +G++   +   +   E++    LK ++VVVA++ ES
Sbjct: 174 GKTALAIDAIINQKDSGIYSIYVAIGQKASTIANVVRKLEEH--GALKNTIVVVASASES 231

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF
Sbjct: 232 AALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVF 291

Query: 288 SELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
               RLLER              G  + + G++TA+  +     + +  +  +V SI DG
Sbjct: 292 YLHSRLLERAARVSEVYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDG 351

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            I L   L   G  P VDP  SVSR+   A +   KKL   +   +  + E
Sbjct: 352 QIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAAYRE 402


>gi|116493067|ref|YP_804802.1| F0F1 ATP synthase subunit alpha [Pediococcus pentosaceus ATCC
           25745]
 gi|122265469|sp|Q03EL2|ATPA_PEDPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116103217|gb|ABJ68360.1| ATP synthase F1 subcomplex alpha subunit [Pediococcus pentosaceus
           ATCC 25745]
          Length = 505

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 157/338 (46%), Gaps = 20/338 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGR 104
           G F + Q   S+++G VI  N D       GI E    GD+V   GR    P      GR
Sbjct: 58  GVFGMVQNLESNDVGIVIMGNYD-------GIHE----GDVVKRTGRIMEVPVGDALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG  ++ +   +  + +K P  M R+ VE+  +TGI+ ID   P+  GQR 
Sbjct: 107 VVNPLGEPLDGKGAI-QTTKTRPVENKAPGVMQRKSVEQPLQTGIKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222
            +      GK+T+   ++  + D     I   +G++   VR  +E           +VV+
Sbjct: 166 LIIGDRKTGKTTIAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRRYGAMDYTIVVS 225

Query: 223 T--SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              S+ +P+L  +AP     + E F   G +VL++ D +++ A + RE++      P   
Sbjct: 226 AGPSEPAPMLY-LAPYAGAAMGEEFMYNGKHVLIVYDDLSKQADAYRELSLILRRPPGRE 284

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            YP  +F    RLLER      +   G++TA+  V     + +  I  +V SI DG + L
Sbjct: 285 AYPGDIFYTHSRLLERAAKLSDDLGGGSMTALPFVETKAGDVSAYIPTNVISITDGQVFL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           +      G  P +D   SVSR+   A     KK+  +L
Sbjct: 345 DGDYFNSGTRPAIDAGTSVSRVGGDAQIKAMKKVAGTL 382


>gi|157285179|gb|ABV31329.1| ATPase [Vibrio pectenicida]
 gi|157285295|gb|ABV31387.1| ATPase [Vibrio pectenicida]
          Length = 441

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 144/303 (47%), Gaps = 21/303 (6%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV+N LG+PIDG   + +  LS  +    P  ++RQ V++  +TG + +D   P+  
Sbjct: 67  LLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRQSVDQPVQTGYKSVDSMIPIGR 125

Query: 161 GQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLK 215
           GQR  V      GK+ L   ++  + +     I   +G++   +   +   E++    L 
Sbjct: 126 GQRELVIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEH--GALA 183

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            ++VVVA++ ES  L+ +AP    T+ EYF  +G++ L++ D +++ A + R+I+     
Sbjct: 184 NTIVVVASASESAALQYLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKR 243

Query: 276 LPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHND 322
            P    +P  VF    RLLER              G  + + G++TA+  +     + + 
Sbjct: 244 PPGREAFPGDVFYLHSRLLERAARVNADYVEKFTNGEVKGKTGSLTALPIIETQAGDVSA 303

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   +  
Sbjct: 304 FVPTNVISITDGQIFLQTELFNSGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAA 363

Query: 383 FEE 385
           + E
Sbjct: 364 YRE 366


>gi|323388531|gb|ADX60551.1| ATP synthase beta subunit [Toechima tenax]
          Length = 319

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 15/262 (5%)

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREF 205
           +TGI+V+D+      G +IG+F G+G+GK+ L+     +       +S+ G  G   RE 
Sbjct: 13  ETGIKVVDLLXXXRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 72

Query: 206 IEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVL 253
            + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +VL
Sbjct: 73  NDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVL 132

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V
Sbjct: 133 LFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAV 190

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372
            V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  + 
Sbjct: 191 YVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYET 250

Query: 373 VSSLTHLIHRFEETRDIRLIGG 394
              +   + R++E +DI  I G
Sbjct: 251 AQRVKQTLQRYKELQDIIAILG 272


>gi|242279697|ref|YP_002991826.1| ATP synthase F1, alpha subunit [Desulfovibrio salexigens DSM 2638]
 gi|242122591|gb|ACS80287.1| ATP synthase F1, alpha subunit [Desulfovibrio salexigens DSM 2638]
          Length = 508

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 159/341 (46%), Gaps = 17/341 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPID 114
           +D  G  + +  D + I  +G    +  GD     G     P      GR+++ LG P+D
Sbjct: 60  NDVPGMALDLLPDSIGIALLGANTGLRAGDEAVPSGTVLSVPVGDALIGRIVDPLGNPLD 119

Query: 115 GDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           G    G    + E   + S+ PP + R  V+    +GI+VID   P+  GQR  +     
Sbjct: 120 G----GPAPETFETRVVESEAPPILMRAPVDTPMASGIKVIDTLIPIGRGQRELILGDRQ 175

Query: 172 IGKSTL-LSMFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDES 227
            GK+ + L +       D V +   +G+R   V   I D L ++  +  + VVV   D  
Sbjct: 176 TGKTAIALDIILNQKKGDVVCVYCAIGQRSTSVARVI-DTLRNHGAMAYTFVVVVEGDAP 234

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +AP  A ++AEYF  +G +VL+I D +TR A + R+++      P    +P  +F
Sbjct: 235 SGMQYIAPYAATSMAEYFMEQGKDVLIIYDDLTRHAQAYRQLSLLMRRPPGREAFPGDIF 294

Query: 288 SELPRLLE---RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
               RLLE   R+ P E   G +TA+  V  +  N +  I  ++ SI DG I L+  L +
Sbjct: 295 YIHSRLLERSTRLKP-EHGGGTLTALPIVETEAQNISAYIPTNLISITDGQIYLSPVLFQ 353

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +G  P +D   SVSR+  +A     +K+   L     +F+E
Sbjct: 354 KGMLPAIDVGKSVSRVGGRAQPKAYRKVSGDLRLTYSQFQE 394


>gi|171920573|ref|ZP_02931837.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185178864|ref|ZP_02964638.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024257|ref|ZP_02996953.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518549|ref|ZP_03004010.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524099|ref|ZP_03004179.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867747|ref|ZP_03079748.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273545|ref|ZP_03206081.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209554117|ref|YP_002284554.1| F0F1 ATP synthase subunit alpha [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225550353|ref|ZP_03771302.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225551515|ref|ZP_03772461.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903277|gb|EDT49566.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209500|gb|EDU06543.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018920|gb|EDU56960.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188997893|gb|EDU66990.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195659968|gb|EDX53348.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660602|gb|EDX53858.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198250065|gb|EDY74845.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209541618|gb|ACI59847.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225379330|gb|EEH01695.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|225379507|gb|EEH01869.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 797

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 157/341 (46%), Gaps = 9/341 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  + +  D V +  +G    I  GD V+   +    P      GRV++ALGK +D   +
Sbjct: 62  GMALNLEEDAVGVVLLGDYSNIKEGDRVYRTKKIVEVPVGDIMLGRVVDALGKAVDNKGN 121

Query: 119 LGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +     S  ++ K+ P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+T+
Sbjct: 122 IVANKFS--VIEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTI 179

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234
              ++  +       +   +G++   +   + D      ++ + VV A + E P L+ +A
Sbjct: 180 AIDAIINQKGRNVNCVYVAIGQKNSTIANVVRDLEAHGAMEYTTVVTANASELPALQYIA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T VTIAE +  +G +VL++ D +++ A + R ++      P    YP  VF    RLL
Sbjct: 240 PFTGVTIAEEWMHQGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSRLL 299

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER    + E   G+ITA+  +     + +  I  +V SI DG I +  SL   G+ P +D
Sbjct: 300 ERACKLKDELGAGSITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAGQRPAID 359

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
              SVSR+   A     K+  +SL   +  + E       G
Sbjct: 360 AGQSVSRVGSAAQIKSVKQTGASLKLELANYRELEAFSQFG 400


>gi|172072932|ref|YP_001806693.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
 gi|171854951|dbj|BAG16691.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
 gi|239794319|dbj|BAH73316.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
 gi|239794402|dbj|BAH73398.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
          Length = 507

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 169/374 (45%), Gaps = 21/374 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+  +I  S  + GRV+NAL +PID
Sbjct: 69  SDNVGAVL-----------MGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALARPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK
Sbjct: 118 GKGKISSSE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILR 231
           + + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+
Sbjct: 177 TAVATDTIINQKNQNVICVYVAIGQKASSVAQVVNTFEDRGAMEYTIVVAETADSPATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   +AEYF  K  + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGAALAEYFMYKEQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     S+   G++TA+  V     + +  I  +V SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLNSQLGGGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIQP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +  E   +     +   +D      + +
Sbjct: 357 AINVGLSVSRVGSAAQMKAMKQVAGKLKLELAQLAE---LEAFAQFASDLDKATQDQLAR 413

Query: 410 VPIIYDFLKQSPSD 423
              + + LKQS SD
Sbjct: 414 GQRLRELLKQSQSD 427


>gi|238853682|ref|ZP_04644050.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 202-4]
 gi|282851610|ref|ZP_06260975.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 224-1]
 gi|311110488|ref|ZP_07711885.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri MV-22]
 gi|238833720|gb|EEQ25989.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 202-4]
 gi|282557578|gb|EFB63175.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 224-1]
 gi|311065642|gb|EFQ45982.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri MV-22]
          Length = 503

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 151/335 (45%), Gaps = 17/335 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 71  VGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTDKTRPI 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L L         
Sbjct: 130 ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTIINQKGQ 189

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVT 240
           D + I + +G++   V+  +E      LK+      ++VV A   E   +  +AP     
Sbjct: 190 DVICIYVAIGQKESTVKNSVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           R+   A     KK+  +L   +  + E       G
Sbjct: 365 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG 399


>gi|168031226|ref|XP_001768122.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680560|gb|EDQ66995.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 479

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 26/285 (9%)

Query: 103 GRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  GKPID G   L +  L +   S  P    R   E+  +TGI  ID+   +  G
Sbjct: 93  GRIFNGSGKPIDNGPPILAEAYLDISGASINPS--ERTYPEEMIQTGISTIDVMNSIARG 150

Query: 162 QRIGVFAGSGIGKSTLLSMFARS--------------------DCFDKVIISLVGERGRE 201
           Q+I +F+ +G+  + + +   R                     D F  ++ + +G     
Sbjct: 151 QKIPLFSAAGLPHNEIAAQICRQAGLVQRLEKEKNLLEDEHGEDNF-CIVFAAMGVNMET 209

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSI 259
              F  D+  + ++++  + +  +++  I R + P  A+T AEY++ + G +VL+IL  +
Sbjct: 210 ATFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYYAYECGKHVLVILTDM 269

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           + +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + +  D+
Sbjct: 270 SSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDD 329

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
              PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 330 ITHPIPDLTGYITEGQIYVDRQLQNRQIYPPINVLPSLSRLMKSA 374


>gi|306820519|ref|ZP_07454152.1| V-type ATP synthase, subunit A [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551433|gb|EFM39391.1| V-type ATP synthase, subunit A [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 591

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 124/240 (51%), Gaps = 12/240 (5%)

Query: 131 KVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           +VP P   R  + K   TG RVID+F P+  G    +  G G GK+      A+    D 
Sbjct: 196 RVPRPVKTRMPISKPLITGQRVIDVFFPIAKGGTSALPGGFGTGKTMTQHQLAKWSDADI 255

Query: 190 VIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTI 241
           ++    GERG E+ + +E++        G  L +  +++A +   P+  + A + T +TI
Sbjct: 256 IVYIGCGERGNEMTDVLEEFPKLIDPRTGKPLMERTILIANTSNMPVAAREASIYTGITI 315

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEY+   G +V ++ DS +R+A ++REI+    E+P   GYP  + S + +  ER G  +
Sbjct: 316 AEYYRDMGYHVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAQFYERAGYVK 375

Query: 302 ---KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              +  G+IT + +V   G + ++P+ ++ +  +   I L+++LA    YP V+ L S S
Sbjct: 376 TLSQNDGSITVIGAVSPPGGDFSEPVTENTKRFVTAFIGLDKNLAYIRHYPAVNYLTSYS 435


>gi|323388521|gb|ADX60546.1| ATP synthase beta subunit [Litchi chinensis]
          Length = 307

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 15/262 (5%)

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREF 205
           +TGI+V+D+      G +IG+F G+G+GK+ L+     +       +S+ G  G   RE 
Sbjct: 1   ETGIKVVDLLXXXRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREG 60

Query: 206 IEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVL 253
            + Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +VL
Sbjct: 61  NDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVL 120

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V
Sbjct: 121 LFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAV 178

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372
            V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       +E  + 
Sbjct: 179 YVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYET 238

Query: 373 VSSLTHLIHRFEETRDIRLIGG 394
              +   + R++E +DI  I G
Sbjct: 239 AQRVKQTLQRYKELQDIIAILG 260


>gi|313678479|ref|YP_004056219.1| ATP synthase F1 subunit beta [Mycoplasma bovis PG45]
 gi|312950488|gb|ADR25083.1| ATP synthase F1, beta subunit [Mycoplasma bovis PG45]
          Length = 459

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 139/258 (53%), Gaps = 11/258 (4%)

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGR 200
           +TGI+ ID F P+  G ++G+F G+G+GK+ L+     ++  ++     + I   GER R
Sbjct: 124 ETGIKAIDFFIPIVKGFKLGIFGGAGVGKTVLMKEIIFNVNNKNKNTSNIFIG-SGERSR 182

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258
           E  E  ++ +  NL K S + ++  +ES   R       +T AEY   K  ++VLL +D+
Sbjct: 183 EGIELYDELVQSNLMKNSTMYISKMNESAGARMSIVPIGITAAEYLRDKQKEDVLLFIDN 242

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I RF  +  E++   G+ P   GY +++ S++  +  R+   + + G IT+  +V +  D
Sbjct: 243 IYRFVQAENEVSATLGKKPSVGGYQSTLESDVANVQNRL--FKNKNGAITSFQTVFLPMD 300

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377
           + +DP A +V + LDG++VL+R  A +G  P  DPLAS S   D+     +    +  + 
Sbjct: 301 DLSDPSAVAVFNHLDGNLVLSRDQAAKGILPAFDPLASSSNSVDETIIGKKHLDAIIEVK 360

Query: 378 HLIHRFEETRDIRLIGGY 395
            ++  +++  D+ LI G+
Sbjct: 361 KILKAYKDLEDVILILGF 378


>gi|312865266|ref|ZP_07725494.1| ATP synthase F1, alpha subunit [Streptococcus downei F0415]
 gi|311099377|gb|EFQ57593.1| ATP synthase F1, alpha subunit [Streptococcus downei F0415]
          Length = 501

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 149/317 (47%), Gaps = 15/317 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSME- 127
           V I  +G   EI+ GD V   G+    P      GRV+N LG+P+DG      GD+    
Sbjct: 71  VGIIILGDFSEITEGDTVKRTGKIMEVPVGPELVGRVVNPLGQPVDG-----LGDIQTSK 125

Query: 128 ---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
              + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++   ++  
Sbjct: 126 TRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAIDAILN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V +
Sbjct: 186 QKDQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLVYIAPYAGVAM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 AEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAQVS 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  +SVSR
Sbjct: 306 DDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAGSSVSR 365

Query: 360 LADKAWSADEKKLVSSL 376
           +   A     KK+  +L
Sbjct: 366 VGGSAQIKAMKKVAGTL 382


>gi|195355680|ref|XP_002044318.1| GM13022 [Drosophila sechellia]
 gi|194130605|gb|EDW52648.1| GM13022 [Drosophila sechellia]
          Length = 387

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 16/242 (6%)

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++   TGI+V+D
Sbjct: 110 RIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVVD 168

Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREF 205
           +  P   G +IG+F G+G+GK+     L++  A++     V    VGER RE      E 
Sbjct: 169 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNEM 227

Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261
           IE     L D   K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I R
Sbjct: 228 IEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 287

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  
Sbjct: 288 FTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLT 345

Query: 322 DP 323
           DP
Sbjct: 346 DP 347


>gi|148262505|ref|YP_001229211.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Geobacter uraniireducens Rf4]
 gi|146396005|gb|ABQ24638.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Geobacter uraniireducens Rf4]
          Length = 524

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 146/304 (48%), Gaps = 25/304 (8%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG R +D   PL  G       G G GK+ L    A+    D V+    GERG E+ E +
Sbjct: 190 TGQRAVDFLFPLARGGAAVFPGGFGTGKTVLEQSVAKFSAVDLVVYVGCGERGNEMAELL 249

Query: 207 EDY--LGDN------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           +++  L D       + +++VVV TS+     R+ +  TAVT+AEY+   G +VLL+ DS
Sbjct: 250 DEFAALSDPWTGKPLMDRTIVVVNTSNMPVAAREASIYTAVTMAEYYRDMGYHVLLLADS 309

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK---GNITAVISVLV 315
           I+R+A ++REI+++  E+P   GYPT + S L    ER G  E      G+++ ++SV  
Sbjct: 310 ISRWAEALREISSSLEEMPGEEGYPTYLASRLSGFFERAGVVETMNCGIGSLSMILSVSP 369

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS-------RLADKAWSAD 368
            G +  +P+  +         +L+ +LA    +P ++   S S       R      S  
Sbjct: 370 PGGDFTEPVTQACLRTAGAFFMLDTALAHRRHFPAINWFQSYSLYERNIVRHFTAEISPR 429

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYR--PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            ++L+     ++ R E  R++  I G       D +L K   ++ +  +FL Q   +  +
Sbjct: 430 WEELLRRCREMLQREESLREVAEIVGIEGLQDADRLLMKVAERIRL--EFLCQ---NAYT 484

Query: 427 EDVF 430
           ED F
Sbjct: 485 EDAF 488


>gi|116629875|ref|YP_815047.1| F0F1 ATP synthase subunit alpha [Lactobacillus gasseri ATCC 33323]
 gi|122273187|sp|Q042L3|ATPA_LACGA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116095457|gb|ABJ60609.1| ATP synthase F1 subcomplex alpha subunit [Lactobacillus gasseri
           ATCC 33323]
          Length = 506

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 151/335 (45%), Gaps = 17/335 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 74  VGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTDKTRPI 132

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L L         
Sbjct: 133 ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTIINQKGQ 192

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVT 240
           D + I + +G++   V+  +E      LK+      ++VV A   E   +  +AP     
Sbjct: 193 DVICIYVAIGQKESTVKNSVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           R+   A     KK+  +L   +  + E       G
Sbjct: 368 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG 402


>gi|222099894|ref|YP_002534462.1| V-ATPase A-subunit [Thermotoga neapolitana DSM 4359]
 gi|221572284|gb|ACM23096.1| V-ATPase A-subunit [Thermotoga neapolitana DSM 4359]
          Length = 587

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 13/235 (5%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RVIDIF P+  G    +  G G GK+      A+    D V+    GERG E+ E +
Sbjct: 210 TGQRVIDIFFPISKGGTAAIPGGFGTGKTITQHQLAKWADTDVVVYIGCGERGNEMTEVL 269

Query: 207 EDY-------LGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           E++        G  L    +++A +   P+  R+ +  T +TIAEYF   G NV L+ DS
Sbjct: 270 EEFPQLQDPRTGKPLMDRTILIANTSNMPVSAREASIYTGITIAEYFRDMGYNVALMADS 329

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI---SVLV 315
            +R+A ++RE++    E+PV  GYP+ + + + +  ER G  E   G + +V    +V  
Sbjct: 330 TSRWAEALRELSGRLEEMPVEEGYPSYLATRIAQFYERAGLCENLNGTVGSVTIIGAVSP 389

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD--KAWSAD 368
            G + ++P+    +  +     L+R+LA    YP ++ + S S   +  + W  D
Sbjct: 390 PGGDFSEPVTQHTKRFVRCFWALDRNLAYSRHYPSINWITSYSEYVETLEDWFKD 444


>gi|119368484|ref|YP_913172.1| ATP synthase alpha subunit [Gossypium barbadense]
 gi|125987713|sp|A0ZZ20|ATPA_GOSBA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|119224846|dbj|BAF41232.1| ATP synthase alpha subunit [Gossypium barbadense]
          Length = 507

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 10/371 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGW 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +F     GK+ 
Sbjct: 120 GEISASE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIFGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S  +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++       + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LEAFAQFASDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPS 422
            + + LKQS S
Sbjct: 416 RLRELLKQSQS 426


>gi|326328134|gb|ADZ54134.1| ATP synthase beta subunit [Bradyrhizobium japonicum]
          Length = 232

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 17/217 (7%)

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLG 211
             G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  + 
Sbjct: 1   AKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESKVN 60

Query: 212 DN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            +          K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF 
Sbjct: 61  ADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFT 120

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP
Sbjct: 121 QAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADDLTDP 178

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R+++E+G YP VDPL S SR+
Sbjct: 179 APATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRM 215


>gi|326328132|gb|ADZ54133.1| ATP synthase beta subunit [Bradyrhizobium japonicum]
          Length = 230

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 116/217 (53%), Gaps = 17/217 (7%)

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLG 211
             G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  + 
Sbjct: 1   AKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESKVN 60

Query: 212 DN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            +          K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF 
Sbjct: 61  ADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFT 120

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP
Sbjct: 121 QAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADDLTDP 178

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +  + LD   VL+R+++E+G YP VDPL S SR+
Sbjct: 179 APATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRM 215


>gi|258690466|gb|ACV87995.1| ATP synthase beta subunit [Ircinia strobilina]
          Length = 301

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 124/237 (52%), Gaps = 22/237 (9%)

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157
            GR+IN +G+PID      +G +  E  S +    P      V++   +TGI+V+D+  P
Sbjct: 63  LGRIINVIGEPIDE-----RGPVETESKSPIHQEAPEFAEMNVDQEILETGIKVVDLLAP 117

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY----- 209
              G +IG+F G+G+GK+ L+     +         + + VGER RE  +F  +      
Sbjct: 118 YTKGGKIGLFGGAGVGKTVLIIELINNVALTHGGYSVFAGVGERTREGNDFYHEMITSGV 177

Query: 210 --LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266
             L D+  K  +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  + 
Sbjct: 178 ISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 237

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP
Sbjct: 238 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIFVPADDLTDP 292


>gi|218176242|ref|YP_002364499.1| ATP synthase CF1 alpha subunit [Festuca arundinacea]
 gi|215882326|gb|ACJ70756.1| ATP synthase CF1 alpha subunit [Festuca arundinacea]
          Length = 507

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 171/369 (46%), Gaps = 12/369 (3%)

Query: 63  IRINLDI--VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +
Sbjct: 63  IALNLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGKGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 123 IASE-SRLIESPAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPL 236
               +     VI   V  G+R   V + + ++  +   +  +VVA   +SP  L+ +AP 
Sbjct: 182 DTILNQKGQNVICVYVAIGQRASSVAQVVTNFHEEGAMEYTIVVAEMADSPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 TGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 302 AAKLNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++       + +F E   ++    +   +D      + +   + 
Sbjct: 362 ISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LQAFAQFASALDKTSQNQLARGRRLR 418

Query: 415 DFLKQSPSD 423
           + LKQS S+
Sbjct: 419 ELLKQSQSN 427


>gi|326328126|gb|ADZ54130.1| ATP synthase beta subunit [Bradyrhizobium japonicum]
          Length = 229

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 17/215 (7%)

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGDN 213
           G +IG+F G+G+GK+ L+     +         + + VGER RE      EFIE  +  +
Sbjct: 2   GGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESKVNAD 61

Query: 214 --------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
                     K  +V    +E P  R    LT +T+AE+F  +G +VL  +D+I RF  +
Sbjct: 62  PHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQA 121

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
             E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP  
Sbjct: 122 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADDLTDPAP 179

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  + LD   VL+R+++E+G YP VDPL S SR+
Sbjct: 180 ATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRM 214


>gi|269118840|ref|YP_003307017.1| ATP synthase F1 subunit alpha [Sebaldella termitidis ATCC 33386]
 gi|268612718|gb|ACZ07086.1| ATP synthase F1, alpha subunit [Sebaldella termitidis ATCC 33386]
          Length = 501

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 173/375 (46%), Gaps = 18/375 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117
           +G V+ +  + V    +G    I  GD V   G+    P+     GRV++ LG PIDG  
Sbjct: 60  MGMVLNLEENNVGAVLLGDFSLIKEGDTVRSTGKITQVPAGEAMLGRVVDPLGNPIDGKG 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + +    ME+  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 120 PI-EASRFMELERKAYGIIDRQPVTEPLQTGIKAIDGMIPIGKGQRELIIGDRQTGKTAV 178

Query: 178 -LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
            +         D   I +   + R     +   L D+  ++ + +V AT+ ES  L+ +A
Sbjct: 179 AVDAIVNQKGNDVYCIYVAIGQKRSTVAGLHQKLIDSGAMEYTTIVAATASESASLQYLA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P   V++AEYF  +G +VL++ D +++ A + RE++      P    YP  +F    RLL
Sbjct: 239 PYAGVSMAEYFMEQGKHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDIFYLHSRLL 298

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G+ITA+  V     + +  I  ++ SI DG I L   L   G  P ++
Sbjct: 299 ERAAKLSDELGAGSITALPIVETQAGDVSAYIPTNIISITDGQIFLESDLFNAGFRPAIN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA----VH 408
              SVSR+   A     K++ S +   + ++ E     L+   + G D  LDKA    ++
Sbjct: 359 AGISVSRVGGSAQIKAMKQVASQVKLELAQYTE-----LLAFAQFGSD--LDKATRDQLN 411

Query: 409 QVPIIYDFLKQSPSD 423
           +   I + LKQ   D
Sbjct: 412 RGAKIMEVLKQPQYD 426


>gi|225022780|ref|ZP_03711972.1| hypothetical protein CORMATOL_02825 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944463|gb|EEG25672.1| hypothetical protein CORMATOL_02825 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 553

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 24/379 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 74  IGVAQNLDTDRVGVVILGNYETLKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLG 133

Query: 118 SL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           ++  + D  +E+  + P  + R+ V +  +TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 134 AIEAEEDRVLEL--QAPSVLQRKPVGEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 191

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGR---EVREFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G     VR+ +ED+    L+ + +V A 
Sbjct: 192 VCIDTILNQKANWESGDKTKQVRCIYVAIGQKGSTVAAVRKTLEDH--GALEYTTIVAAP 249

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP
Sbjct: 250 ASDSAGFKWLAPFAGAALGQHWMYQGYHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 309

Query: 284 TSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   
Sbjct: 310 GDVFYLHSRLLERAAKLSDDMGGGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESD 369

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D 
Sbjct: 370 LFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFATFASDLDP 426

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                + +   + + LKQ+
Sbjct: 427 ASKAQLDRGARLVELLKQA 445


>gi|323453684|gb|EGB09555.1| hypothetical protein AURANDRAFT_37110 [Aureococcus anophagefferens]
          Length = 618

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 33/290 (11%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMS------------------KVPPAMNRQRVEKG 144
           G+V+   G   DG DS    D  +E+ +                  +  P + +    + 
Sbjct: 169 GKVVKVYGDSADGKDSYSISDTVLEVYNEHTHQTHELKLAHFWPVRRARPIVQKMPGNQA 228

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
             TG+RV+D   P   G    V    G GK+ +    ++    D VI    GERG E+ E
Sbjct: 229 LTTGLRVVDAIFPSVLGGTCAVPGAFGCGKTVISQSISKFSNSDAVIYVGCGERGNEMAE 288

Query: 205 FIEDYL-------GDN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            + D+        G     +K++ +V  TS+     R+ +  T +T+AEYF   G NV +
Sbjct: 289 VLCDFPELTTTIDGKEVGIMKRTALVANTSNMPVAAREASIYTGITLAEYFRDMGMNVSM 348

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITA 309
           + DS +R+A ++REI+   GE+P   GYP  + + L    ER G +E     + +G +T 
Sbjct: 349 MADSTSRWAEALREISGRLGEMPADSGYPAYLGARLAAFYERAGRAECLGSPRREGTVTV 408

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           + +V   G + +DP+  +  SI+     L++ LA+   +P ++ L S ++
Sbjct: 409 IGAVSPPGGDFSDPVTAATLSIVQVFWGLDKKLAQRKHFPSLNWLISYTK 458


>gi|312373433|gb|EFR21178.1| hypothetical protein AND_17443 [Anopheles darlingi]
          Length = 498

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 106 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 164

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VIISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     K               ++ + +G 
Sbjct: 165 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKQTGKSVLDEHEDNFAIVFAAMGV 224

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 225 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 284

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 285 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 344

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 345 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 393


>gi|328957986|ref|YP_004375372.1| F0F1 ATP synthase subunit alpha [Carnobacterium sp. 17-4]
 gi|328674310|gb|AEB30356.1| F0F1 ATP synthase subunit alpha [Carnobacterium sp. 17-4]
          Length = 515

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 157/335 (46%), Gaps = 23/335 (6%)

Query: 66  NLDIVYICPVGIGE--EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK- 121
           NL++  +  + +GE   I  GD+V   GR    P      GRV+N LG+PIDG   LG+ 
Sbjct: 65  NLEVNDVGIIILGEFTGIREGDIVKRTGRIMQVPVGEAMIGRVVNPLGQPIDG---LGEI 121

Query: 122 -GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LS 179
               +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  V      GK+TL + 
Sbjct: 122 VTTKTRPIESEAPGVMDRRSVNEPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTTLAID 181

Query: 180 MFARSDCFDKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRK 232
                   D + I + +G++   VR  +E      LKK      ++V+ A++ +   L  
Sbjct: 182 TILNQKGQDTICIYVAIGQKESTVRNQVE-----TLKKYGAMDYTIVMTASASQPAPLLY 236

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I E F   G +VL+I D +T+ A + RE++      P    YP  VF    R
Sbjct: 237 IAPYAGSAIGEEFMYNGKHVLIIFDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSR 296

Query: 293 LLERIGP-SEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER    S+K   G++TA+  V     + +  I  +V SI DG I L   L   G  P 
Sbjct: 297 LLERAAKLSDKLGGGSMTAIPFVETQAGDISAYIPTNVISITDGQIFLESDLFYSGIRPA 356

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +    SVSR+   A     KK+  +L   +  F E
Sbjct: 357 IAAGLSVSRVGGSAQIKAMKKVSGTLRLDLASFRE 391


>gi|224543436|ref|ZP_03683975.1| hypothetical protein CATMIT_02645 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523563|gb|EEF92668.1| hypothetical protein CATMIT_02645 [Catenibacterium mitsuokai DSM
           15897]
          Length = 482

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 138/274 (50%), Gaps = 14/274 (5%)

Query: 98  SACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
           S    GRV +  G+PIDG   LG    + S +I  +    ++R        TGI  ID  
Sbjct: 82  SMEMLGRVFSGAGRPIDG---LGDIYAEKSADINGQPLNPVSRVYPRNYINTGISSIDCL 138

Query: 156 TPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDK------VIISLVGERGREVREFIED 208
             L  GQ++ +F+GSG+  + L + +  ++   D+      V+ + +G        F   
Sbjct: 139 MTLIRGQKLPIFSGSGLPHNQLAVQIVKQAKIADEAGQGFAVVFAAMGVTNDVANYFRRS 198

Query: 209 YLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
           +    + + VV+       PI+ R + P  A+T AEY + + D +VL+I   +T +  ++
Sbjct: 199 FEEAGVMQRVVMFMNLSNDPIIERILTPRCALTAAEYLAFEHDMHVLVIYTDVTSYCEAL 258

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE +++ GE+P  +GYP  ++S+L  L ER G ++  KG++T +  + +  ++   P+ D
Sbjct: 259 REFSSSKGEIPGRKGYPGYLYSDLASLYERAGIAKGAKGSVTQIPILTMPNNDITHPVPD 318

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               I +G I L+  L   G YPPV  L S+SRL
Sbjct: 319 LTGYITEGQITLDPELNATGIYPPVGVLPSLSRL 352


>gi|195329486|ref|XP_002031442.1| GM25995 [Drosophila sechellia]
 gi|195571381|ref|XP_002103682.1| GD20555 [Drosophila simulans]
 gi|194120385|gb|EDW42428.1| GM25995 [Drosophila sechellia]
 gi|194199609|gb|EDX13185.1| GD20555 [Drosophila simulans]
          Length = 490

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 20/290 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 98  LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 156

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----------------SDCFDKVIISLVG 196
           D+   +  GQ+I +F+ +G+  + + +   R                +D F  ++ + +G
Sbjct: 157 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHTDNF-AIVFAAMG 215

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLL 254
                 R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+
Sbjct: 216 VNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLV 275

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + 
Sbjct: 276 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILT 335

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +  D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 336 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 385


>gi|195036310|ref|XP_001989614.1| GH18893 [Drosophila grimshawi]
 gi|193893810|gb|EDV92676.1| GH18893 [Drosophila grimshawi]
          Length = 490

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 20/290 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 98  LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 156

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----------------SDCFDKVIISLVG 196
           D+   +  GQ+I +F+ +G+  + + +   R                +D F  ++ + +G
Sbjct: 157 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHTDNF-AIVFAAMG 215

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLL 254
                 R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+
Sbjct: 216 VNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLV 275

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + 
Sbjct: 276 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILT 335

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +  D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 336 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 385


>gi|149384591|gb|ABR25118.1| ATP synthase beta chain [Megalastrum macrotheca]
 gi|149384593|gb|ABR25119.1| ATP synthase beta chain [Megalastrum subincisum]
          Length = 426

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 24/312 (7%)

Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
              GR+ N LG+P+D   +LG  +  ++  I    P           F+TGI+V+D   P
Sbjct: 37  TTLGRISNVLGEPVD---NLGPVQSSVTFPIHRPAPAFTQLDTKLSIFETGIKVVDPLAP 93

Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
              G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +   +     
Sbjct: 94  YRRGGKIGLPGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 152

Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264
           +         K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  
Sbjct: 153 VINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQ 212

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           +  E++   G +P A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP 
Sbjct: 213 AGSEVSALLGRMPSAVGYQPTLGTEMGSSQERI--TSTKEGSITSIQAVYVPADDLTDPA 270

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382
             +  + LD   VL+R LA +G YP VDPL S S +  + W   E+       +     R
Sbjct: 271 PATTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTSQR 329

Query: 383 FEETRDIRLIGG 394
           ++E +DI  I G
Sbjct: 330 YKELQDIIAILG 341


>gi|168028019|ref|XP_001766526.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682171|gb|EDQ68591.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 487

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 26/285 (9%)

Query: 103 GRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GR+ N  GKPID G   L +  L +   S  P    R   E+  +TGI  ID+   +  G
Sbjct: 101 GRIFNGSGKPIDNGPPILAEAYLDISGASINPS--ERTYPEEMIQTGISTIDVMNSIARG 158

Query: 162 QRIGVFAGSGIGKSTLLSMFARS--------------------DCFDKVIISLVGERGRE 201
           Q+I +F+ +G+  + + +   R                     D F  ++ + +G     
Sbjct: 159 QKIPLFSAAGLPHNEIAAQICRQAGLVQRLEKEKNLLEDEPGEDNF-CIVFAAMGVNMET 217

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSI 259
              F  D+  + ++++  + +  +++  I R + P  A+T AEY++ + G +VL+IL  +
Sbjct: 218 ATFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYYAYECGKHVLVILTDM 277

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           + +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + +  D+
Sbjct: 278 SSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDD 337

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
              PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 338 ITHPIPDLTGYITEGQIYVDRQLQNRQIYPPINVLPSLSRLMKSA 382


>gi|63091837|emb|CAH58769.1| ATP synthase alpha chain [Lactococcus lactis subsp. lactis]
          Length = 367

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 11/329 (3%)

Query: 66  NLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   +  + +G+ +S+  GD V   G+   I       GRV+N LG+P+DG   L  G
Sbjct: 26  NLDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTG 85

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
             +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++ +   
Sbjct: 86  K-TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAI 144

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTA 238
                 D + I + +G++   VR  +E    LG      VV  + S  SP+L  +AP   
Sbjct: 145 LNQKGQDMICIYVAIGQKESTVRTQVETLRKLGAMDYTIVVTASASQPSPLLY-IAPYAG 203

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER  
Sbjct: 204 AAMGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAA 263

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +S
Sbjct: 264 KLSDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSS 323

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VSR+   A     KK+  +L   +  F E
Sbjct: 324 VSRVGGAAQIKAMKKVAGTLRLDLASFRE 352


>gi|42518863|ref|NP_964793.1| F0F1 ATP synthase subunit alpha [Lactobacillus johnsonii NCC 533]
 gi|268319741|ref|YP_003293397.1| ATP synthase F1, alpha subunit [Lactobacillus johnsonii FI9785]
 gi|81667994|sp|Q74K17|ATPA_LACJO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|41583149|gb|AAS08759.1| ATP synthase alpha chain [Lactobacillus johnsonii NCC 533]
 gi|262398116|emb|CAX67130.1| ATP synthase F1, alpha subunit [Lactobacillus johnsonii FI9785]
          Length = 503

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 151/335 (45%), Gaps = 17/335 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 71  VGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTDKTRPI 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L L         
Sbjct: 130 ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTIINQKGQ 189

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVT 240
           D + I + +G++   V+  +E      LK+      ++VV A   E   +  +AP     
Sbjct: 190 DVICIYVAIGQKESTVKNSVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           R+   A     KK+  +L   +  + E       G
Sbjct: 365 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG 399


>gi|227889721|ref|ZP_04007526.1| H(+)-transporting two-sector ATPase [Lactobacillus johnsonii ATCC
           33200]
 gi|300361420|ref|ZP_07057597.1| ATP synthase F1 sector alpha subunit [Lactobacillus gasseri JV-V03]
 gi|227849585|gb|EEJ59671.1| H(+)-transporting two-sector ATPase [Lactobacillus johnsonii ATCC
           33200]
 gi|300354039|gb|EFJ69910.1| ATP synthase F1 sector alpha subunit [Lactobacillus gasseri JV-V03]
 gi|329667590|gb|AEB93538.1| ATP synthase F1 [Lactobacillus johnsonii DPC 6026]
          Length = 506

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 151/335 (45%), Gaps = 17/335 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 74  VGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTDKTRPI 132

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L L         
Sbjct: 133 ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTIINQKGQ 192

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVT 240
           D + I + +G++   V+  +E      LK+      ++VV A   E   +  +AP     
Sbjct: 193 DVICIYVAIGQKESTVKNSVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           R+   A     KK+  +L   +  + E       G
Sbjct: 368 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG 402


>gi|24298775|dbj|BAC22095.1| V-ATPase A-subunit [Thermotoga neapolitana]
          Length = 586

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 13/235 (5%)

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TG RVIDIF P+  G    +  G G GK+      A+    D V+    GERG E+ E +
Sbjct: 209 TGQRVIDIFFPISKGGTAAIPGGFGTGKTITQHQLAKWADTDVVVYIGCGERGNEMTEVL 268

Query: 207 EDY-------LGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           E++        G  L    +++A +   P+  R+ +  T +TIAEYF   G NV L+ DS
Sbjct: 269 EEFPQLQDPRTGKPLMDRTILIANTSNMPVSAREASIYTGITIAEYFRDMGYNVALMADS 328

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI---SVLV 315
            +R+A ++RE++    E+PV  GYP+ + + + +  ER G  E   G + +V    +V  
Sbjct: 329 TSRWAEALRELSGRLEEMPVEEGYPSYLATRIAQFYERAGLCENLNGTVGSVTIIGAVSP 388

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD--KAWSAD 368
            G + ++P+    +  +     L+R+LA    YP ++ + S S   +  + W  D
Sbjct: 389 PGGDFSEPVTQHTKRFVRCFWALDRNLAYSRHYPSINWITSYSEYVETLEDWFKD 443


>gi|332374006|gb|AEE62144.1| unknown [Dendroctonus ponderosae]
          Length = 492

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 18/293 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 100 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDY-LDIQGQPINPWSRIYPEEMIQTGISAI 158

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     KV               + + +G 
Sbjct: 159 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKSVMDDHEDNFAIVFAAMGV 218

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 219 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 278

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 279 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 338

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
             D+   PI D    I +G I ++R L     YPP++ L S+SRL   A   D
Sbjct: 339 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGED 391


>gi|195400242|ref|XP_002058727.1| GJ14577 [Drosophila virilis]
 gi|194142287|gb|EDW58695.1| GJ14577 [Drosophila virilis]
          Length = 490

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 20/290 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 98  LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 156

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----------------SDCFDKVIISLVG 196
           D+   +  GQ+I +F+ +G+  + + +   R                +D F  ++ + +G
Sbjct: 157 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHTDNF-AIVFAAMG 215

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLL 254
                 R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+
Sbjct: 216 VNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLV 275

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + 
Sbjct: 276 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILT 335

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +  D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 336 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 385


>gi|14718028|gb|AAK72755.1| ATP synthase beta subunit [Dendrophthora clavata]
          Length = 281

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 38  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVFGGVGERTRE 97

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+           N+ +S V  V    +E P  R    LTA+T+AEYF    + +V
Sbjct: 98  GNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDV 157

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 158 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 215

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 216 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 263


>gi|82597098|ref|XP_726538.1| ATP synthase F1 subunit alpha [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481982|gb|EAA18103.1| ATP synthase F1, alpha subunit [Plasmodium yoelii yoelii]
          Length = 548

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 188/399 (47%), Gaps = 27/399 (6%)

Query: 50  VHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVI 106
           +H  ++  N+  G    +  D V I   G    I  GD++    R   ++      GRV+
Sbjct: 87  IHNEEDKSNITYGMATNLEYDNVGIVIFGNDRNIKEGDIIKRTNRIIDVNVGYELLGRVV 146

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           +ALG  IDG+  +   +   +I  K P  + R+ V +   TGI+ ID   P+  GQR  +
Sbjct: 147 DALGNEIDGEKKIETKE-RRKIEVKAPGIIARKSVNESIITGIKCIDSLVPIGRGQRELI 205

Query: 167 FAGSGIGKSTLL--SMFARSDCFDKV--------IISLVGERGREVREFI---EDYLGDN 213
                 GK+ +   ++  + +  DKV        +   +G++   + + +   + Y  D 
Sbjct: 206 IGDRQTGKTAIAIDAIIHQKNINDKVPDNEKVYCVYVAIGQKKSNIAKLVNLLKKY--DA 263

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           LK +++V +++ ++  L+ +AP T   +AE+F  +G++ L+I D +++ A + R+++   
Sbjct: 264 LKYTIIVNSSASDASPLQFLAPYTGCAMAEFFRDRGNHALIIYDDLSKQAVAYRQLSLLL 323

Query: 274 GELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    YP  +F    +LLER        + G++TA+  +    ++ +  I  +V SI
Sbjct: 324 RRPPGREAYPGDIFYIHSKLLERSSKLNDSLKGGSLTALPVIETLNNDVSAYIPTNVISI 383

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L  +G  P ++   SVSR+   A     KKL SS+   + +F   R+I  
Sbjct: 384 TDGQIFLESELFYKGIIPAINVGLSVSRIGSSAQYKCMKKLASSMKLELAQF---REIVA 440

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDLSSE 427
              +   +D    K + +  I+ + LKQ   SP ++S +
Sbjct: 441 FSQFGSDLDASTKKLIEKGKILTEILKQKQYSPVNISYQ 479


>gi|15082071|gb|AAK84017.1|AF393838_6 H+-ATPase cytoplasmic F1-part alpha-subunit [Lactococcus lactis
           subsp. lactis]
          Length = 500

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 11/329 (3%)

Query: 66  NLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
           NLD   +  + +G+ +S+  GD V   G+   I       GRV+N LG+P+DG   L  G
Sbjct: 65  NLDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTG 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMF 181
             +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++ +   
Sbjct: 125 K-TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAI 183

Query: 182 ARSDCFDKVIISL-VGERGREVREFIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTA 238
                 D + I + +G++   VR  +E    LG      VV  + S  SP+L  +AP   
Sbjct: 184 LNQKGQDMIWIYVAIGQKESTVRTQVETLRKLGAMDYTIVVTASASQPSPLLY-IAPYAG 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER  
Sbjct: 243 AAMGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAA 302

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +S
Sbjct: 303 KLSDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSS 362

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           VSR+   A     KK+  +L   +  F E
Sbjct: 363 VSRVGGAAQIKAMKKVAGTLRLDLASFRE 391


>gi|125773061|ref|XP_001357789.1| GA14484 [Drosophila pseudoobscura pseudoobscura]
 gi|195158893|ref|XP_002020318.1| GL13570 [Drosophila persimilis]
 gi|54637522|gb|EAL26924.1| GA14484 [Drosophila pseudoobscura pseudoobscura]
 gi|194117087|gb|EDW39130.1| GL13570 [Drosophila persimilis]
          Length = 490

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 20/290 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 98  LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 156

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----------------SDCFDKVIISLVG 196
           D+   +  GQ+I +F+ +G+  + + +   R                +D F  ++ + +G
Sbjct: 157 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDHTDNF-AIVFAAMG 215

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLL 254
                 R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+
Sbjct: 216 VNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLV 275

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           IL  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + 
Sbjct: 276 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILT 335

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +  D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 336 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 385


>gi|323388519|gb|ADX60545.1| ATP synthase beta subunit [Harpullia arborea]
          Length = 305

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 17/261 (6%)

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           GI+V+D+      G +IG+F G+G+GK+ L+     +       +S+ G  G   RE  +
Sbjct: 1   GIKVVDLLXXXXRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGND 60

Query: 208 DYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
            Y+           NL +S V  V    +E P  R    LTA+T+AEYF    + +VLL 
Sbjct: 61  LYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLF 120

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 121 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 178

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLV 373
             D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  + W   E+  +  
Sbjct: 179 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETA 237

Query: 374 SSLTHLIHRFEETRDIRLIGG 394
             +   + R++E +DI  I G
Sbjct: 238 QRVKQTLQRYKELQDIIAILG 258


>gi|290745910|gb|ADD51622.1| ATP synthase beta chain [Terpsichore david-smithii]
          Length = 359

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 18/281 (6%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161
           GR+ N LG+P+D    +    +S   + +  PA  +   +   F+TGI+V+D+  P   G
Sbjct: 69  GRISNVLGEPVDNLGPVRSSAISP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 126

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212
            +IG+F G+G+GK+  ++    +       +S+ G  G   RE  + Y+           
Sbjct: 127 GKIGLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQ 186

Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269
           N+ +S V  V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E+
Sbjct: 187 NISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 246

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           +     +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  
Sbjct: 247 SALLDRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTS 304

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
           + LD   VL+R LA +G YP VDPL S S +  + W   E+
Sbjct: 305 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 344


>gi|239946821|ref|ZP_04698574.1| ATP synthase F1, alpha subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241068659|ref|XP_002408500.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|215492488|gb|EEC02129.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|239921097|gb|EER21121.1| ATP synthase F1, alpha subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 512

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 25/345 (7%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   
Sbjct: 61  GLVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDG--- 117

Query: 119 LGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
             KGD++ +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 --KGDIASKEYRHIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--------SMFARSDCFDKV--IISLVGERGREVREFIEDYLGDN--LKKSVVVVA 222
           + +            + ++  DK+  I   +G++   V + ++  L D   +  ++VV A
Sbjct: 176 TAIAVDTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKK-LEDAGAMDYTIVVSA 234

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ E+  L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    Y
Sbjct: 235 TASEAAALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAY 294

Query: 283 PTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P+ VF    RLLER     +EK  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 295 PSDVFYLHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 354

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            L  +G  P V+   SVSR+   A     K++  S+   + +F E
Sbjct: 355 ELFYKGVRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRE 399


>gi|242011359|ref|XP_002426420.1| vacuolar ATP synthase subunit B, putative [Pediculus humanus
           corporis]
 gi|212510519|gb|EEB13682.1| vacuolar ATP synthase subunit B, putative [Pediculus humanus
           corporis]
          Length = 496

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 100 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 158

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VIISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     K               ++ + +G 
Sbjct: 159 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVLDDSQDNFAIVFAAMGV 218

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 219 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 278

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 279 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 338

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 339 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 387


>gi|78103238|ref|YP_358561.1| ATP synthase CF1 alpha subunit [Phalaenopsis aphrodite subsp.
           formosana]
 gi|110832065|sp|Q3BAQ7|ATPA_PHAAO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|58802768|gb|AAW82488.1| ATP synthase CF1 alpha chain [Phalaenopsis aphrodite subsp.
           formosana]
          Length = 507

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 173/378 (45%), Gaps = 11/378 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIKEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISSSE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKM 233
           + +    +     VI   V  G++   V + +  +  G  ++ ++VV  T+D    L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQEGGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  +  +I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++       + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAE---LEAFAQFASDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPSD-LSSED 428
            + + LKQS SD L+ ED
Sbjct: 416 RLRELLKQSQSDPLAVED 433


>gi|7524606|ref|NP_042360.1| ATP synthase CF1 alpha subunit [Pinus thunbergii]
 gi|1168568|sp|P41602|ATPA_PINTH RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|1262600|dbj|BAA04319.1| H+-ATPase alpha subunit [Pinus thunbergii]
          Length = 494

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 160/353 (45%), Gaps = 20/353 (5%)

Query: 41  QYVCLGDFVVHQGKN--SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISP 97
           + V  GD  V    N  SDN+G V+           +G G  I  G  V   G+  +I  
Sbjct: 52  ELVEFGDGTVGIALNLGSDNVGAVL-----------MGDGLMIQEGSSVRATGKIAQIPV 100

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
           S  + GRV+NAL +PIDG   +   +  + I S  P  ++R+ V +  +TG+  ID   P
Sbjct: 101 SDAYLGRVVNALAQPIDGKGKISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIP 159

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLK 215
           +  GQR  +      GK+ + +    +     VI   V  G+R   V + +  +      
Sbjct: 160 IGRGQRELIIGDRQTGKTAVATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFRERGAM 219

Query: 216 KSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
              +VVA + +SP  L+ +AP T  T+AEYF  K  +  +I D +++ A + R+++    
Sbjct: 220 AYTIVVAETADSPATLQYLAPYTGATLAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLR 279

Query: 275 ELPVARGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    YP  VF    RLLER     S+  +G++TA+  V     + +  I  +  SI 
Sbjct: 280 RPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSVTALPIVETQAGDVSAYIPTNAISIT 339

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           DG I  +  L   G  P ++   SVSR+   A     KK+   L   + +F E
Sbjct: 340 DGQIFSSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|289809229|ref|ZP_06539858.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 99

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/95 (61%), Positives = 73/95 (76%), Gaps = 2/95 (2%)

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L+ DS+TR+A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  
Sbjct: 2   VVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFY 59

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAEEG
Sbjct: 60  TVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAEEG 94


>gi|62318461|dbj|BAD94435.1| alpha subunit of F1F0-ATP synthase [Acidithiobacillus ferrooxidans]
          Length = 514

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 178/391 (45%), Gaps = 53/391 (13%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           + +NL+   +  V +GE   L  GD+V   GR    P A    GRV+NAL +PIDG  ++
Sbjct: 63  LALNLEQDNVGAVVLGEFSGLQEGDVVKCTGRVMQVPIAKALLGRVVNALAQPIDGKGAI 122

Query: 120 GKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              +   +++ K+ P + +RQ V++  +TGI+ ID   P+  GQ+         GK+ + 
Sbjct: 123 DAEEF--DVLEKIAPGIIDRQSVDEPMQTGIKSIDAMVPIGRGQQTSFIGDRQTGKTAV- 179

Query: 179 SMFARSDCFDKVIISLVGERGREV-REFI----------------EDYLGDNLKKSVVVV 221
                       + +++ ++G+EV R ++                E+Y    ++ + V+ 
Sbjct: 180 -----------AVDAILNQKGKEVQRSYVAIGQKASTVAGVVRKLEEY--GAMEYTTVIA 226

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A + ES  ++ +AP    T+ EYF  +G N L++ D +T+ A + R+I+      P    
Sbjct: 227 ANASESAAMQYLAPYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRQISLLLRRPPGREA 286

Query: 282 YPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           YP  VF    RLLER              G  +   G++TA+  +     + +  +  +V
Sbjct: 287 YPGDVFYLHSRLLERAARVNADFVEKFTKGEVKGNTGSLTALPIIETQAGDVSAFVPTNV 346

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P ++   S SR+   A +   KKL   +   + ++   R+
Sbjct: 347 ISITDGQIYLETDLFNAGIRPAINAGLSGSRVGGAAQTKIIKKLGGGIRLDLAQY---RE 403

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     +   +D I  K + +   + +F+KQ
Sbjct: 404 LAAFAQFASDLDEITRKRIERGKRVTEFVKQ 434


>gi|3132304|dbj|BAA28167.1| Cl--pumping ATPase a subunit [Acetabularia acetabulum]
          Length = 502

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 155/331 (46%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE +++  G  V   G+    P    + GRV+N+L +PIDG   +
Sbjct: 63  IALNLETKNVGAVLMGEGLAVQEGSSVRATGKIAQIPVGDEYLGRVVNSLARPIDGKGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ + +
Sbjct: 123 NTTETRL-IESAAPGIISRKSVHEPLQTGLVAVDAMIPIGRGQRELIIGDRQTGKTAIAT 181

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
               +     VI   V  G++   + + +        +  +++V AT+D    L+ +AP 
Sbjct: 182 DTILNQKGKGVICVYVAIGQKASSIAQVVNTLQERGAMDYTIIVAATADTPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T  ++AEYF  KG + L I D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 242 TGASLAEYFMYKGKHTLAIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++  
Sbjct: 302 AAKLNDELGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A     KK+   L   + +F E
Sbjct: 362 ISVSRVGSAAQPKAMKKVAGKLKLELAQFAE 392


>gi|157285095|gb|ABV31287.1| ATPase [Vibrio pectenicida]
          Length = 408

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 144/303 (47%), Gaps = 21/303 (6%)

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV+N LG+PIDG   + +  LS  +    P  ++RQ V++  +TG + +D   P+  
Sbjct: 61  LLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRQSVDQPVQTGYKSVDSMIPIGR 119

Query: 161 GQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLK 215
           GQR  V      GK+ L   ++  + +     I   +G++   +   +   E++    L 
Sbjct: 120 GQRELVIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEH--GALA 177

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            ++VVVA++ ES  L+ +AP    T+ EYF  +G++ L++ D +++ A + R+I+     
Sbjct: 178 NTIVVVASASESAALQYLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKR 237

Query: 276 LPVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHND 322
            P    +P  VF    RLLER              G  + + G++TA+  +     + + 
Sbjct: 238 PPGREAFPGDVFYLHSRLLERAARVNADYVEKFTNGEVKGKTGSLTALPIIETQAGDVSA 297

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   +  
Sbjct: 298 FVPTNVISITDGQIFLQTELFNSGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAA 357

Query: 383 FEE 385
           + E
Sbjct: 358 YRE 360


>gi|168483881|ref|ZP_02708833.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|168492579|ref|ZP_02716722.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC0288-04]
 gi|194398243|ref|YP_002038140.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae G54]
 gi|225857135|ref|YP_002738646.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae P1031]
 gi|226739946|sp|B5E673|ATPA_STRP4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808118|sp|C1CLK8|ATPA_STRZP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|172042777|gb|EDT50823.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|183573277|gb|EDT93805.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC0288-04]
 gi|194357910|gb|ACF56358.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae G54]
 gi|225724967|gb|ACO20819.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae P1031]
 gi|301802230|emb|CBW34980.1| ATP synthase alpha chain [Streptococcus pneumoniae INV200]
 gi|332200069|gb|EGJ14142.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA47368]
          Length = 501

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 151/315 (47%), Gaps = 11/315 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK--GDLSM 126
           V I  +G   +I  GD +   G+    P      GRV++ LG+P+DG   LG+   D + 
Sbjct: 71  VGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDG---LGEIHTDKTR 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARS 184
            + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+   ++  + 
Sbjct: 128 PVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTILNQK 187

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP T V +AE
Sbjct: 188 DQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPYTGVAMAE 247

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER      E
Sbjct: 248 EFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLERSAKVSDE 307

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  +SVSR+ 
Sbjct: 308 LGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAGSSVSRVG 367

Query: 362 DKAWSADEKKLVSSL 376
             A     KK+  +L
Sbjct: 368 GSAQIKAMKKVAGTL 382


>gi|108796967|ref|YP_636267.1| CF1 alpha subunit of ATP synthase [Pseudendoclonium akinetum]
 gi|115312264|sp|Q3ZJ00|ATPA_PSEAK RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|56159665|gb|AAV80689.1| CF1 alpha subunit of ATP synthase [Pseudendoclonium akinetum]
          Length = 502

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 177/375 (47%), Gaps = 13/375 (3%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +G+ +++  G  V   G+  +I  S  + GRV+N+L  PIDG  ++
Sbjct: 63  IALNLETKNVGAVLMGDGLAIQEGSSVRATGKIAQIPVSESYLGRVVNSLALPIDGKGAI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-L 178
              +  + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ + +
Sbjct: 123 NSSETRL-IESLAPGIISRRSVHEPLQTGLVAVDAMIPIGRGQRELIIGDRQTGKTAIAV 181

Query: 179 SMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
                    D + + + +G++   + + +        L  +++V AT+D    L+ +AP 
Sbjct: 182 DTIINQKGKDVICVYVAIGQKASSIAQVVNSLEERGCLSYTIIVAATADTPATLQYLAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T  T+AEYF  KG + L+I D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 242 TGATLAEYFMYKGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAFPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++  
Sbjct: 302 AAKLSDQLGGGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSGDIFNSGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     KK+   L   + +F E   +     +   +D    K + +   + 
Sbjct: 362 ISVSRVGSAAQPKAMKKVAGKLKLELAQFAE---LEAFSQFASDLDQATQKQLSRGSRLR 418

Query: 415 DFLKQSPSD-LSSED 428
           + LKQ+ S  L+ ED
Sbjct: 419 ELLKQAQSSPLALED 433


>gi|291615578|ref|YP_003518320.1| AtpA [Pantoea ananatis LMG 20103]
 gi|291150608|gb|ADD75192.1| AtpA [Pantoea ananatis LMG 20103]
 gi|327395847|dbj|BAK13269.1| ATP synthase alpha chain AtpA [Pantoea ananatis AJ13355]
          Length = 513

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 148/302 (49%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG PIDG  ++     S +E+++  P  ++RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVVNTLGAPIDGKGAIDNDGFSPVEVIA--PGVIDRQSVDQPVQTGYKSVDAMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  +      GK+ +   ++  + D   K +   +G++   +   +   E++    L  
Sbjct: 163 QRELIIGDRQTGKTAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    +P  VF    RLLER              G  + + G++TA+  +     + +  
Sbjct: 281 PGREAFPGDVFYLHSRLLERASRVSADYVERFTNGEVKGQTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L  +L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|169260977|gb|ACA52090.1| ATP synthase beta subunit [Asplenium viride]
          Length = 388

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 22/295 (7%)

Query: 91  GRFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
           G   +       GR+ N LG+PID   +LG  +   +  I    P           F+TG
Sbjct: 94  GPLSVPVGETTLGRIFNVLGEPID---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETG 150

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204
           I+V+D+  P   G +IG+  G+G+GK+ L+    +  A++     V   +  ER RE  +
Sbjct: 151 IKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESINNIAKAHGGVSVFGGVG-ERTREGND 209

Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
              +     +         K  +V    +E P  R     TA T+AEYF      +VLL 
Sbjct: 210 LYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLF 269

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V
Sbjct: 270 IDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYV 327

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             D+  DP   +  + LD   VL+R LA +G +P VDPL S S +  + W   E+
Sbjct: 328 PADDLTDPAPATTSAHLDATTVLSRGLAAKGIHPAVDPLDSTSTML-QPWIVGEE 381


>gi|170089111|ref|XP_001875778.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649038|gb|EDR13280.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 517

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 20/324 (6%)

Query: 60  GQVIRIN--LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +     IV +     G ++    + F     ++  +    GR+ N  G PID   
Sbjct: 68  GQVLEVQGKKAIVQVFEGTSGVDVKATHVEFTGSSMKLPVAEDMLGRIFNGSGNPIDQGP 127

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R   E+  +TGI  ID    +  GQ+I +F+ +G+  + +
Sbjct: 128 KVFAEDY-LDINGSPINPYSRIYPEEMIQTGISTIDTMNSIARGQKIPIFSAAGLPHNEI 186

Query: 178 LSMFARS---------DCFD------KVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221
            +   R          D  D       V+ + +G      R F ED+  + +L +  + +
Sbjct: 187 AAQIVRQAGLVKRPTKDVHDGHEDNFSVVFAAMGVNMETARFFKEDFESNGSLDRVTLFL 246

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVAR 280
             +++  I R + P  A+T AEY++ + + +VL+IL  ++ +A ++RE++    E+P  R
Sbjct: 247 NLANDPTIERIITPRLALTTAEYYAYQLEKHVLVILTDMSSYADALREVSAAREEVPGRR 306

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP  ++++L  + ER G  +   G+IT +  + +  D+   PI D    I +G I ++R
Sbjct: 307 GYPGYMYTDLSTIYERAGRVQGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFVDR 366

Query: 341 SLAEEGRYPPVDPLASVSRLADKA 364
            L     YPP++ L S+SRL   A
Sbjct: 367 QLHNRQIYPPINVLPSLSRLMKSA 390


>gi|148992606|ref|ZP_01822274.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP9-BS68]
 gi|148997430|ref|ZP_01825035.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP11-BS70]
 gi|149011744|ref|ZP_01832940.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP19-BS75]
 gi|149021776|ref|ZP_01835783.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP23-BS72]
 gi|168487557|ref|ZP_02712065.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1087-00]
 gi|168489670|ref|ZP_02713869.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae SP195]
 gi|168493411|ref|ZP_02717554.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|168575965|ref|ZP_02721880.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae MLV-016]
 gi|182684464|ref|YP_001836211.1| ATP synthase subunit A [Streptococcus pneumoniae CGSP14]
 gi|221232222|ref|YP_002511375.1| ATP synthase alpha chain [Streptococcus pneumoniae ATCC 700669]
 gi|225854954|ref|YP_002736466.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae JJA]
 gi|225859267|ref|YP_002740777.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae 70585]
 gi|303254152|ref|ZP_07340265.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae BS455]
 gi|303260732|ref|ZP_07346692.1| ATP synthase subunit A [Streptococcus pneumoniae SP-BS293]
 gi|303264463|ref|ZP_07350383.1| ATP synthase subunit A [Streptococcus pneumoniae BS397]
 gi|303267441|ref|ZP_07353295.1| ATP synthase subunit A [Streptococcus pneumoniae BS457]
 gi|303269784|ref|ZP_07355533.1| ATP synthase subunit A [Streptococcus pneumoniae BS458]
 gi|307068154|ref|YP_003877120.1| F0F1-type ATP synthase subunit alpha [Streptococcus pneumoniae
           AP200]
 gi|226739948|sp|B2IQX2|ATPA_STRPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808115|sp|B8ZLB1|ATPA_STRPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808117|sp|C1CF95|ATPA_STRZJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|259585436|sp|C1C8A1|ATPA_STRP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|147756485|gb|EDK63526.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP11-BS70]
 gi|147764175|gb|EDK71107.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP19-BS75]
 gi|147928623|gb|EDK79637.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP9-BS68]
 gi|147930012|gb|EDK80999.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP23-BS72]
 gi|182629798|gb|ACB90746.1| ATP synthase subunit A [Streptococcus pneumoniae CGSP14]
 gi|183569629|gb|EDT90157.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1087-00]
 gi|183571966|gb|EDT92494.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae SP195]
 gi|183576573|gb|EDT97101.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|183578224|gb|EDT98752.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae MLV-016]
 gi|220674683|emb|CAR69256.1| ATP synthase alpha chain [Streptococcus pneumoniae ATCC 700669]
 gi|225721676|gb|ACO17530.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae 70585]
 gi|225723044|gb|ACO18897.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae JJA]
 gi|302598878|gb|EFL65911.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae BS455]
 gi|302638135|gb|EFL68610.1| ATP synthase subunit A [Streptococcus pneumoniae SP-BS293]
 gi|302640677|gb|EFL71075.1| ATP synthase subunit A [Streptococcus pneumoniae BS458]
 gi|302643032|gb|EFL73325.1| ATP synthase subunit A [Streptococcus pneumoniae BS457]
 gi|302646275|gb|EFL76502.1| ATP synthase subunit A [Streptococcus pneumoniae BS397]
 gi|306409691|gb|ADM85118.1| F0F1-type ATP synthase, alpha subunit [Streptococcus pneumoniae
           AP200]
 gi|332072301|gb|EGI82784.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA17570]
 gi|332199553|gb|EGJ13628.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA41317]
          Length = 501

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 151/315 (47%), Gaps = 11/315 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK--GDLSM 126
           V I  +G   +I  GD +   G+    P      GRV++ LG+P+DG   LG+   D + 
Sbjct: 71  VGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDG---LGEIHTDKTR 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARS 184
            + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+   ++  + 
Sbjct: 128 PVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTILNQK 187

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP T V +AE
Sbjct: 188 DQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPYTGVAMAE 247

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER      E
Sbjct: 248 EFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLERSAKVSDE 307

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  +SVSR+ 
Sbjct: 308 LGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAGSSVSRVG 367

Query: 362 DKAWSADEKKLVSSL 376
             A     KK+  +L
Sbjct: 368 GSAQIKAMKKVAGTL 382


>gi|33519489|ref|NP_878321.1| F0F1 ATP synthase subunit alpha [Candidatus Blochmannia floridanus]
 gi|81666732|sp|Q7VQV8|ATPA_BLOFL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33517152|emb|CAD83534.1| ATP synthase alpha subunit [Candidatus Blochmannia floridanus]
          Length = 513

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 25/364 (6%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E IS G +V   G   R+       GRV+NALG PID    +   +    I S  P
Sbjct: 76  MGSYENISEGMVVKCTGDILRVPVGPELLGRVVNALGVPIDNKGLINCSNY-YPIESDAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVI 191
             ++RQ + +  +TG + ID   P+  GQR  +      GKS L   ++  +S    K I
Sbjct: 135 GVIDRQSINEPIQTGYKSIDSMVPIGRGQRELIIGDRQTGKSALAIDTIINQSCSGVKCI 194

Query: 192 ISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
              +G++   V   +   E+Y    L  ++V++A++ ES IL+ +AP +   + EYF + 
Sbjct: 195 YVAIGQKATTVVNVVKKLEEY--HALDNTIVILASASESAILQYLAPYSGCAMGEYFRNN 252

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE----- 303
           G + L++ D +++ A + R+++      P    YP  +F    RLLER      E     
Sbjct: 253 GQDALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDIFYLHSRLLERSAKVRSEYIERC 312

Query: 304 --------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                    G++TA+  +     + +  I  +V SI DG I L   L   G  P ++P  
Sbjct: 313 TQGKITGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFLESQLFNAGVRPAINPGI 372

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A +   K L   +   + ++   R++     +   +D +  K +     + +
Sbjct: 373 SVSRVGGSAQTKIMKVLSGGIRTALAQY---RELAAFSQFSSELDNVTRKQLQHGQKVTE 429

Query: 416 FLKQ 419
            LKQ
Sbjct: 430 LLKQ 433


>gi|328954123|ref|YP_004371457.1| ATP synthase subunit alpha [Desulfobacca acetoxidans DSM 11109]
 gi|328454447|gb|AEB10276.1| ATP synthase subunit alpha [Desulfobacca acetoxidans DSM 11109]
          Length = 506

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 157/331 (47%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSL 119
           I +NL+   +    +GE+I +  GD+V   GR    P    C GRV++ +G PIDG   +
Sbjct: 62  IALNLEEDNVGCAILGEDIHIKEGDMVKRTGRIAEVPVGEACLGRVLDPVGNPIDGKGPV 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              +    I  K P  + RQ V +   TG + ID  TP+  GQR  +     IGK+ L  
Sbjct: 122 EAKEYR-RIELKAPGVIERQPVNEPMYTGYKAIDAMTPVGRGQRELIIGDRQIGKTALCV 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   V + ++     D +K ++V+ AT+ E   L+ ++  
Sbjct: 181 DAIINQKDSGVVCIYVAIGQKKSTVAQVVDALERNDAMKHTIVISATASEPAPLQYVSAF 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              T+ EY+   G + L+I D +++ A + R+I+      P    +P  +F    RLLER
Sbjct: 241 AGCTMGEYYRDSGRHALIIYDDLSKQATAYRQISLLLRRPPGREAFPGDIFYNHSRLLER 300

Query: 297 IGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 EK  G++TA+  +     + +  I  +V SI DG + L  +L   G  P ++  
Sbjct: 301 AAKLNIEKGGGSLTALPIIETQQGDVSAYIPTNVISITDGQVYLEPALFFAGVRPAINVG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            SVSR+   A     K++  SL   + ++ E
Sbjct: 361 LSVSRVGGAAQVKAMKQVAGSLRLDLAQYRE 391


>gi|307931026|dbj|BAJ21374.1| ATP synthase CF1 alpha subunit [Pedinophyceae sp. YPF-701]
          Length = 363

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 154/335 (45%), Gaps = 17/335 (5%)

Query: 63  IRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE   I  G  V   G+    P    + GRV+NAL +PIDG    
Sbjct: 23  IALNLESKNVGAVLMGEGRSIQEGSSVSATGKIAQIPVGDAYLGRVVNALAQPIDG---- 78

Query: 120 GKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KGD++      I S  P  ++R+ V +   TG+  ID   P+  GQR  +      GK+
Sbjct: 79  -KGDIAATETRLIESPAPGIISRRSVHEPLSTGLVAIDAMIPIGRGQRELIIGDRQTGKT 137

Query: 176 TL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232
            + +         D + + + +G++   + + +        +  S++V AT+D    L+ 
Sbjct: 138 AIAVDTILNQKGKDVICVYVAIGQKASSIAQVVNTLEERGAMDYSIIVAATADTPATLQY 197

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  T+AEYF   G + L+I D +T+ A + RE++      P    YP  VF    R
Sbjct: 198 LAPYTGATLAEYFMYTGRHTLVIYDDLTKQAQAYREMSLLLRRPPGREAYPGDVFYLHSR 257

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++TA+  V     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 258 LLERAAKLSDALGSGSMTALPVVETQEGDVSAYIPTNVISITDGQIFLSADLFNSGLRPA 317

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A     K++   L   + +F E
Sbjct: 318 INVGISVSRVGSAAQPKAMKQVAGKLKLELAQFAE 352


>gi|56477131|ref|YP_158720.1| F0F1 ATP synthase subunit alpha [Aromatoleum aromaticum EbN1]
 gi|81357644|sp|Q5P4E4|ATPA_AZOSE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56313174|emb|CAI07819.1| F1-ATP synthase, alpha subunit [Aromatoleum aromaticum EbN1]
          Length = 512

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 188/415 (45%), Gaps = 43/415 (10%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL +       G + S+T     V  L+  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKSRIQNLQLAATSRNEGTVVSVTDGITRVHGLAD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR    P      GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHITEGDPVKATGRILEVPVGPELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           G     KG ++ ++  K+    P  + RQ V +  +TG++ +D   P+  GQR  +    
Sbjct: 117 G-----KGPINAKLTDKIEKVAPGVIWRQSVSQPVQTGLKSVDAMVPIGRGQRELIIGDR 171

Query: 171 GIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVAT 223
             GK+ +    +      D F   +   +G++   +   +   E++    ++ ++VV AT
Sbjct: 172 QTGKTAVAVDAIINQKGQDMF--CVYVAIGQKASTIANVVRKLEEH--GAMEYTIVVAAT 227

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ES  ++ +AP +  T+ EYF  +G + L+I D +T+ A + R+I+      P    YP
Sbjct: 228 ASESAAMQFIAPYSGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYP 287

Query: 284 TSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
             VF    RLLER              G  + + G++TA+  +     + +  +  +V S
Sbjct: 288 GDVFYLHSRLLERASRVSADHVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVIS 347

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           I DG I L+  L   G  P ++   SVSR+   A +   KKL   +   + ++ E
Sbjct: 348 ITDGQIFLDTDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE 402


>gi|296317295|ref|NP_001171741.1| V-type proton ATPase subunit B [Saccoglossus kowalevskii]
          Length = 503

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 17/288 (5%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++IM +     +R   E+  +TG+  I
Sbjct: 109 LRTPVSEDMLGRVFNGSGKPIDKGPPVLAEDF-LDIMGQPINPWSRIYPEEMIQTGLASI 167

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--------------VIISLVGER 198
           D+   +  GQ+I +F+ +G+  + + +   R     K              ++ + +G  
Sbjct: 168 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKHNKSVMDDHEDNFAIVFAAMGVN 227

Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLIL 256
               R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+IL
Sbjct: 228 METARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTCAEFLAYQCEKHVLVIL 287

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
             ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + + 
Sbjct: 288 TDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMP 347

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            D+   PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 348 NDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 395


>gi|194016315|ref|ZP_03054929.1| ATP synthase F1, alpha subunit [Bacillus pumilus ATCC 7061]
 gi|194011788|gb|EDW21356.1| ATP synthase F1, alpha subunit [Bacillus pumilus ATCC 7061]
          Length = 502

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 151/319 (47%), Gaps = 14/319 (4%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK--G 122
           N+ IV + P    ++I  GD V   GR    P      GR++N LG+P+DG   LG    
Sbjct: 70  NVGIVILGPY---KDIREGDDVKRTGRIMEVPVGEELIGRIVNPLGQPVDG---LGPILT 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
             +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++   ++
Sbjct: 124 SKTRPIESEAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDTI 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP   V
Sbjct: 184 LNQKDQDMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGV 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+ E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER   
Sbjct: 244 TMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAK 303

Query: 300 SEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              EK  G+ITA+  V     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 304 LSDEKGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAVNAGLSV 363

Query: 358 SRLADKAWSADEKKLVSSL 376
           SR+   A     KK+  +L
Sbjct: 364 SRVGGSAQIKAMKKVAGTL 382


>gi|150187318|emb|CAK30226.1| ATP synthase alpha subunit [Streptococcus alactolyticus]
 gi|154424907|emb|CAL18556.1| ATP synthase alpha subunit [Streptococcus alactolyticus]
          Length = 367

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 7/308 (2%)

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD+V   G+    P      GRV+N LG+P+DG   + K   +  + +  P  M R+ V 
Sbjct: 46  GDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI-KTTATRPVEAPAPGVMQRKSVS 104

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGR 200
           +  +TG++ ID   P+  GQR  +      GK+++ +         D + I + +G++  
Sbjct: 105 EPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKES 164

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            VR  +E       L  ++VV A++ +   L  +AP   V +AE F   G +VL++ D +
Sbjct: 165 TVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDL 224

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + RE++      P    YP  VF    RLLER      E   G+ITA+  +    
Sbjct: 225 SKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQA 284

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  IA +V SI DG I L  +L   G  P +D  +SVSR+   A     KK+  +L 
Sbjct: 285 GDISAYIATNVISITDGQIFLQENLFNSGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLR 344

Query: 378 HLIHRFEE 385
             +  + E
Sbjct: 345 LDLASYRE 352


>gi|256848007|ref|ZP_05553451.1| ATP synthase F1, alpha subunit [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715067|gb|EEU30044.1| ATP synthase F1, alpha subunit [Lactobacillus coleohominis
           101-4-CHN]
          Length = 519

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 143/313 (45%), Gaps = 11/313 (3%)

Query: 81  ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMN 137
           I  GD V   GR    P      GRV++ LG+PIDG   LG  K D +  I  K P  M 
Sbjct: 82  IREGDTVKRTGRIMEVPVGDALLGRVVDPLGRPIDG---LGEIKTDKTRPIEKKAPDVME 138

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLV 195
           R+ V +  +TGI+VID   P+  GQR  +      GK+++   ++  + D     I   +
Sbjct: 139 RKSVSEPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSIAIDTIINQKDQDMICIYVAI 198

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPI-LRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   VR  +E           +VV+ S  +P  L  +AP     + E F   G +VL+
Sbjct: 199 GQKESTVRAAVETLRRYGALDYTIVVSASASNPAPLLYIAPYAGAAMGEEFMYNGRDVLI 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + RE++      P    YP  +F    RLLER      +   G++TA+  
Sbjct: 259 IYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDLGGGSMTALPI 318

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I LN      G+ P +D   SVSR+   A     KK+
Sbjct: 319 IQTQAGDVSAYIPTNVISITDGQIFLNADSFYAGQRPAIDAGTSVSRVGGDAQVKAMKKV 378

Query: 373 VSSLTHLIHRFEE 385
             +L   I  + E
Sbjct: 379 SGTLRLDIASYNE 391


>gi|254798617|ref|YP_003058335.1| CF1 alpha subunit of ATP synthase [Parachlorella kessleri]
 gi|229915565|gb|ACQ90908.1| CF1 alpha subunit of ATP synthase [Parachlorella kessleri]
          Length = 506

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 176/380 (46%), Gaps = 23/380 (6%)

Query: 63  IRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V +GE  S+  G  V   G+    P    + GRV+N+L +PIDG    
Sbjct: 63  IALNLETKNVGAVLMGEGTSVQEGSSVRATGKIAQIPVGDGYLGRVVNSLARPIDG---- 118

Query: 120 GKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG++S      I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+
Sbjct: 119 -KGEISTTENRLIESSAPGIISRRSVHEPLQTGIVAIDSMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILR 231
            + +         D V + + +G++   + + + + L D   +  +++V AT+D    L+
Sbjct: 178 AIAVDTILNQKGKDVVCVYVAIGQKASSIAQVV-NTLQDRGAMDYTIIVAATADSPATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   +AEYF   G + L+I D +T+ A + RE++      P    YP  VF    
Sbjct: 237 YLAPYTGAALAEYFMYTGRHTLVIYDDLTKQAQAYREMSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P
Sbjct: 297 RLLERAAKLNDKLGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E   +     +   +D      + +
Sbjct: 357 AINVGISVSRVGSAAQPKAMKQVAGKLKLELAQFAE---LEAFSQFASDLDQATQNQLAR 413

Query: 410 VPIIYDFLKQSPSD-LSSED 428
              + + LKQS S  L+ ED
Sbjct: 414 GQRLRELLKQSQSSPLALED 433


>gi|401327|sp|P31401|VATB_MANSE RecName: Full=V-type proton ATPase subunit B; Short=V-ATPase
           subunit B; AltName: Full=Vacuolar proton pump subunit B
 gi|9714|emb|CAA45706.1| H(+)-transporting ATPase [Manduca sexta]
          Length = 494

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 102 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 160

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     K+               + + +G 
Sbjct: 161 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKIPGKSVLDDHEDNFAIVFAAMGV 220

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 221 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 280

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 281 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 340

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 341 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 389


>gi|30265330|ref|NP_847707.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Ames]
 gi|42784477|ref|NP_981724.1| F0F1 ATP synthase subunit alpha [Bacillus cereus ATCC 10987]
 gi|47530869|ref|YP_022218.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47569802|ref|ZP_00240473.1| ATP synthase F1, alpha subunit [Bacillus cereus G9241]
 gi|49188143|ref|YP_031396.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Sterne]
 gi|49480407|ref|YP_039299.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140254|ref|YP_086576.1| F0F1 ATP synthase subunit alpha [Bacillus cereus E33L]
 gi|65317284|ref|ZP_00390243.1| COG0056: F0F1-type ATP synthase, alpha subunit [Bacillus anthracis
           str. A2012]
 gi|161511197|ref|NP_834970.2| F0F1 ATP synthase subunit alpha [Bacillus cereus ATCC 14579]
 gi|162382767|ref|YP_897497.2| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis str. Al
           Hakam]
 gi|165873333|ref|ZP_02217936.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0488]
 gi|167636401|ref|ZP_02394701.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0442]
 gi|167642062|ref|ZP_02400288.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0193]
 gi|170689702|ref|ZP_02880879.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0465]
 gi|170709433|ref|ZP_02899841.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0389]
 gi|177656030|ref|ZP_02937137.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0174]
 gi|190569418|ref|ZP_03022302.1| ATP synthase F1, alpha subunit [Bacillus anthracis Tsiankovskii-I]
 gi|196039534|ref|ZP_03106839.1| ATP synthase F1, alpha subunit [Bacillus cereus NVH0597-99]
 gi|196045592|ref|ZP_03112822.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB108]
 gi|206970269|ref|ZP_03231222.1| ATP synthase F1, alpha subunit [Bacillus cereus AH1134]
 gi|206976910|ref|ZP_03237812.1| ATP synthase F1, alpha subunit [Bacillus cereus H3081.97]
 gi|217962796|ref|YP_002341374.1| F0F1 ATP synthase subunit alpha [Bacillus cereus AH187]
 gi|218906484|ref|YP_002454318.1| ATP synthase F1, alpha subunit [Bacillus cereus AH820]
 gi|222098778|ref|YP_002532836.1| f0f1 ATP synthase subunit alpha [Bacillus cereus Q1]
 gi|225867284|ref|YP_002752662.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB102]
 gi|227818070|ref|YP_002818079.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. CDC 684]
 gi|228917916|ref|ZP_04081452.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930314|ref|ZP_04093318.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936592|ref|ZP_04099386.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949028|ref|ZP_04111300.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228955554|ref|ZP_04117557.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228961571|ref|ZP_04123180.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228988532|ref|ZP_04148619.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229050978|ref|ZP_04194527.1| ATP synthase subunit alpha [Bacillus cereus AH676]
 gi|229072774|ref|ZP_04205973.1| ATP synthase subunit alpha [Bacillus cereus F65185]
 gi|229082521|ref|ZP_04214984.1| ATP synthase subunit alpha [Bacillus cereus Rock4-2]
 gi|229094417|ref|ZP_04225489.1| ATP synthase subunit alpha [Bacillus cereus Rock3-42]
 gi|229124811|ref|ZP_04253989.1| ATP synthase subunit alpha [Bacillus cereus 95/8201]
 gi|229130557|ref|ZP_04259513.1| ATP synthase subunit alpha [Bacillus cereus BDRD-Cer4]
 gi|229142049|ref|ZP_04270574.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST26]
 gi|229153471|ref|ZP_04281649.1| ATP synthase subunit alpha [Bacillus cereus m1550]
 gi|229158869|ref|ZP_04286926.1| ATP synthase subunit alpha [Bacillus cereus ATCC 4342]
 gi|229181555|ref|ZP_04308881.1| ATP synthase subunit alpha [Bacillus cereus 172560W]
 gi|229187533|ref|ZP_04314673.1| ATP synthase subunit alpha [Bacillus cereus BGSC 6E1]
 gi|229193559|ref|ZP_04320503.1| ATP synthase subunit alpha [Bacillus cereus ATCC 10876]
 gi|229199431|ref|ZP_04326094.1| ATP synthase subunit alpha [Bacillus cereus m1293]
 gi|229603396|ref|YP_002869522.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0248]
 gi|254686270|ref|ZP_05150129.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724266|ref|ZP_05186050.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. A1055]
 gi|254735235|ref|ZP_05192944.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744439|ref|ZP_05202119.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Kruger B]
 gi|254755743|ref|ZP_05207776.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Vollum]
 gi|254759524|ref|ZP_05211549.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Australia
           94]
 gi|296505735|ref|YP_003667435.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis BMB171]
 gi|300117818|ref|ZP_07055585.1| F0F1 ATP synthase subunit alpha [Bacillus cereus SJ1]
 gi|301056775|ref|YP_003794986.1| ATP synthase subunit A [Bacillus anthracis CI]
 gi|81568735|sp|Q72XE6|ATPA_BACC1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81613473|sp|Q6HAX7|ATPA_BACHK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81685357|sp|Q630U1|ATPA_BACCZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81714853|sp|Q81JZ3|ATPA_BACAN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158512704|sp|A0RL97|ATPA_BACAH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739844|sp|B7JGN2|ATPA_BACC0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739847|sp|B7HY67|ATPA_BACC7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807674|sp|C3P1F6|ATPA_BACAA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807675|sp|C3LFI1|ATPA_BACAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807676|sp|C1F0N0|ATPA_BACC3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807677|sp|B9IRT9|ATPA_BACCQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|30260008|gb|AAP29193.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. Ames]
 gi|42740409|gb|AAS44332.1| ATP synthase F1, alpha subunit [Bacillus cereus ATCC 10987]
 gi|47506017|gb|AAT34693.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47553544|gb|EAL11924.1| ATP synthase F1, alpha subunit [Bacillus cereus G9241]
 gi|49182070|gb|AAT57446.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. Sterne]
 gi|49331963|gb|AAT62609.1| ATP synthase F1, alpha subunit [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973723|gb|AAU15273.1| ATP synthase F1, alpha subunit [Bacillus cereus E33L]
 gi|164710930|gb|EDR16504.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0488]
 gi|167509980|gb|EDR85400.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0193]
 gi|167528235|gb|EDR91017.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0442]
 gi|170125666|gb|EDS94585.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0389]
 gi|170666344|gb|EDT17130.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0465]
 gi|172079885|gb|EDT64994.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0174]
 gi|190559473|gb|EDV13474.1| ATP synthase F1, alpha subunit [Bacillus anthracis Tsiankovskii-I]
 gi|196023423|gb|EDX62100.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB108]
 gi|196029694|gb|EDX68296.1| ATP synthase F1, alpha subunit [Bacillus cereus NVH0597-99]
 gi|206734846|gb|EDZ52015.1| ATP synthase F1, alpha subunit [Bacillus cereus AH1134]
 gi|206744876|gb|EDZ56281.1| ATP synthase F1, alpha subunit [Bacillus cereus H3081.97]
 gi|217064940|gb|ACJ79190.1| ATP synthase F1, alpha subunit [Bacillus cereus AH187]
 gi|218538070|gb|ACK90468.1| ATP synthase F1, alpha subunit [Bacillus cereus AH820]
 gi|221242837|gb|ACM15547.1| ATP synthase F1, alpha subunit [Bacillus cereus Q1]
 gi|225787520|gb|ACO27737.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB102]
 gi|227004759|gb|ACP14502.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. CDC 684]
 gi|228584007|gb|EEK42162.1| ATP synthase subunit alpha [Bacillus cereus m1293]
 gi|228589864|gb|EEK47739.1| ATP synthase subunit alpha [Bacillus cereus ATCC 10876]
 gi|228595900|gb|EEK53580.1| ATP synthase subunit alpha [Bacillus cereus BGSC 6E1]
 gi|228601923|gb|EEK59418.1| ATP synthase subunit alpha [Bacillus cereus 172560W]
 gi|228624480|gb|EEK81250.1| ATP synthase subunit alpha [Bacillus cereus ATCC 4342]
 gi|228630075|gb|EEK86726.1| ATP synthase subunit alpha [Bacillus cereus m1550]
 gi|228641338|gb|EEK97644.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST26]
 gi|228652896|gb|EEL08778.1| ATP synthase subunit alpha [Bacillus cereus BDRD-Cer4]
 gi|228658602|gb|EEL14264.1| ATP synthase subunit alpha [Bacillus cereus 95/8201]
 gi|228688954|gb|EEL42781.1| ATP synthase subunit alpha [Bacillus cereus Rock3-42]
 gi|228700953|gb|EEL53476.1| ATP synthase subunit alpha [Bacillus cereus Rock4-2]
 gi|228710265|gb|EEL62240.1| ATP synthase subunit alpha [Bacillus cereus F65185]
 gi|228722355|gb|EEL73751.1| ATP synthase subunit alpha [Bacillus cereus AH676]
 gi|228771149|gb|EEM19628.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228798053|gb|EEM45057.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804116|gb|EEM50732.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228810601|gb|EEM56950.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823027|gb|EEM68865.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829300|gb|EEM74933.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841713|gb|EEM86824.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229267804|gb|ACQ49441.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0248]
 gi|296326787|gb|ADH09715.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis BMB171]
 gi|298724682|gb|EFI65357.1| F0F1 ATP synthase subunit alpha [Bacillus cereus SJ1]
 gi|300378944|gb|ADK07848.1| ATP synthase subunit A [Bacillus cereus biovar anthracis str. CI]
 gi|324329255|gb|ADY24515.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 502

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 147/317 (46%), Gaps = 10/317 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P     EI  GD V   GR    P      GRV+N LG+P+DG   +   + 
Sbjct: 70  NVGIIILGPY---TEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--LLSMFA 182
           +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   L ++  
Sbjct: 126 TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIIN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L+ ++VV A++ +   L  +AP   VT+
Sbjct: 186 QKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 305

Query: 302 KEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             K  G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVSR
Sbjct: 306 DAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSR 365

Query: 360 LADKAWSADEKKLVSSL 376
           +   A      K+  +L
Sbjct: 366 VGGSAQIKAMSKVSGTL 382


>gi|256372560|ref|YP_003110384.1| ATP synthase F1, alpha subunit [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009144|gb|ACU54711.1| ATP synthase F1, alpha subunit [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 504

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 154/331 (46%), Gaps = 9/331 (2%)

Query: 63  IRINLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           + +NLD   I  V +G++  I  G +V   G     P      GRVI+ LG+P+DG   +
Sbjct: 65  LALNLDEEAIGAVILGDQEGIREGQIVRSTGEILSVPVGDELLGRVIDPLGRPLDGLGPI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
               LS  +  + P    RQ V +  +TGI+ ID   P+  GQR  +      GK+++  
Sbjct: 125 A-ASLSRRLEVQAPGITKRQPVNQPLQTGIKAIDTLVPIGRGQRELIIGDRKTGKTSIAL 183

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPL 236
            ++  +     K I   VG++G  V   +E       L  +VVV A + E    + +AP 
Sbjct: 184 DAIINQRGQGVKCIYVAVGQKGTSVASVVETLRAAGALAYTVVVSAPASEPAPFKYLAPY 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               I +++   GD+ L++ D +++ A + R+++      P    YP  +F    RLLER
Sbjct: 244 AGCAIGQHWMESGDDALIVYDDLSKQADAYRQLSLLLRRPPGREAYPGDIFYLHSRLLER 303

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P +D  
Sbjct: 304 AARLSPELGGGSLTALPIIETKAGDISAYIPTNVISITDGQIFLDADLFYSGVRPAIDVG 363

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ASVSR+   A +   K++  SL   + +F E
Sbjct: 364 ASVSRVGGSAQTKAMKEVAGSLRLELAQFRE 394


>gi|133917172|emb|CAJ33227.1| ATP synthase alpha subunit [Lactobacillus gasseri]
          Length = 367

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 150/327 (45%), Gaps = 17/327 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 32  VGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTDKTRPI 90

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L L         
Sbjct: 91  ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTIINQKGQ 150

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVT 240
           D + I + +G++   V+  +E      LK+      ++VV A   E   +  +AP     
Sbjct: 151 DVICIYVAIGQKESTVKNSVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 205

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 206 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 265

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 266 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 325

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEE 385
           R+   A     KK+  +L   +  + E
Sbjct: 326 RVGGSAQIKAMKKVAGTLRVDLASYRE 352


>gi|115349965|ref|YP_764384.1| CF1 alpha subunit of ATP synthase [Stigeoclonium helveticum]
 gi|122165163|sp|Q06SI2|ATPA_STIHE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|98990179|gb|ABF60146.1| CF1 alpha subunit of ATP synthase [Stigeoclonium helveticum]
          Length = 504

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 155/333 (46%), Gaps = 9/333 (2%)

Query: 63  IRINLDIVYICPV--GIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           I +NL+   +  V  G G +I  G  V   G+  +I+    + GRV+++L +PIDG   +
Sbjct: 62  IALNLEAKNVGAVLMGDGLKIKEGSKVRATGKVAQIAVGEGYLGRVVDSLARPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ +  
Sbjct: 122 ASDDTRL-IESPAPGIISRRSVHEPLQTGLIAVDAMIPIGRGQRELIIGDRQTGKTAIAI 180

Query: 180 MFARSDCFDKVIISLV--GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
               +     VI   V  G++   V + +        L  +V+V A +D +  L+ +AP 
Sbjct: 181 DTILNQKGKNVICVYVAIGQKASSVAQVVNTLRERGALDYTVIVTANADSAATLQYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T  TIAEYF     + L+I D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 TGATIAEYFMYTNRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++  
Sbjct: 301 AAKLNDALGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNSGVRPAINVG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            SVSR+   A     K++  SL   + +FEE R
Sbjct: 361 ISVSRVGSAAQPKAMKQVAGSLKLQLAQFEELR 393


>gi|157111261|ref|XP_001651458.1| ATP synthase subunit beta vacuolar [Aedes aegypti]
 gi|4680480|gb|AAD27666.1|AF092934_1 vacuolar ATPase B subunit [Aedes aegypti]
 gi|108878452|gb|EAT42677.1| ATP synthase subunit beta vacuolar [Aedes aegypti]
          Length = 496

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 104 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 162

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VIISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     K               ++ + +G 
Sbjct: 163 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKHTGKSVLDEHEDNFAIVFAAMGV 222

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 223 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 282

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 283 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 342

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 343 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 391


>gi|50346767|ref|YP_053140.1| ATP synthase CF1 alpha subunit [Nymphaea alba]
 gi|75290275|sp|Q6EW63|ATPA_NYMAL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|50250312|emb|CAF28578.1| ATPase alpha subunit [Nymphaea alba]
          Length = 507

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 158/334 (47%), Gaps = 7/334 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEILASEYRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQKGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRQRHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIG-PSEK-EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   PS +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKPSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           +   SVSR+   A     K++   L   + +F E
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE 392


>gi|91090031|ref|XP_967844.1| PREDICTED: similar to H(+)-transporting ATPase [Tribolium
           castaneum]
 gi|270014269|gb|EFA10717.1| hypothetical protein TcasGA2_TC012133 [Tribolium castaneum]
          Length = 496

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 104 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 162

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     KV               + + +G 
Sbjct: 163 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKSVLDDHEDNFAIVFAAMGV 222

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 223 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFMAYQCEKHVLVI 282

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 283 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 342

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 343 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 391


>gi|89898929|ref|YP_521400.1| F0F1 ATP synthase subunit alpha [Rhodoferax ferrireducens T118]
 gi|119367949|sp|Q223D4|ATPA1_RHOFD RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|89343666|gb|ABD67869.1| ATP synthase F1, alpha subunit [Rhodoferax ferrireducens T118]
          Length = 517

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 176/381 (46%), Gaps = 27/381 (7%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDS 118
           G  + +  D V    +G  E IS G+ V   GR    P      GRV+NALG+PIDG   
Sbjct: 66  GLALNLERDSVGAVILGAYEHISEGNTVKCTGRILEVPVGPELKGRVVNALGQPIDGK-- 123

Query: 119 LGKGDLSM-EIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            G  D  M +++ KV P  + RQ V +  +TG++ ID   P+  GQR  +      GK+ 
Sbjct: 124 -GPIDAKMTDVIEKVAPGVIARQSVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGKTA 182

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKM 233
           +   ++  +       +   +G++   V+  +        ++ ++VV AT+ ES  ++ +
Sbjct: 183 VAIDAIINQKGQNMTCVYVAIGQKASSVKNVVRSLEQAGAMEYTIVVAATASESAAMQYV 242

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF    RL
Sbjct: 243 AAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRL 302

Query: 294 LERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  +     + +  +  +V SI DG I L  
Sbjct: 303 LERAARVNEKYVEDFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLET 362

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR-FEETRDIRLIGGYRPGV 399
           SL   G  P ++   SVSR+   A +    KL+ +L+  I     + R++     +   +
Sbjct: 363 SLFNAGIRPAINAGISVSRVGGAAQT----KLIKNLSGGIRTDLAQYRELAAFAQFASDL 418

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D    K + +   + + LKQ+
Sbjct: 419 DEATRKQLERGARVTELLKQA 439


>gi|11467778|ref|NP_050829.1| ATP synthase CF1 alpha subunit [Nephroselmis olivacea]
 gi|17432922|sp|Q9TL16|ATPA_NEPOL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|5880707|gb|AAD54800.1|AF137379_23 CF1 alpha subunit of ATP synthase [Nephroselmis olivacea]
          Length = 501

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 15/338 (4%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G  I  G  V   G+    P    + GRV+NAL +PIDG 
Sbjct: 60  TVGIALNLEADNVGAVLMGSGLSIQEGSAVKATGKIAQVPVGEAFLGRVVNALARPIDG- 118

Query: 117 DSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KGD++ +    +    P  + R+ V +  +TG+  ID   P+  GQR  +      
Sbjct: 119 ----KGDIASKESRLLEGPAPGIIERRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQT 174

Query: 173 GKSTLLSMFARSDCFDKVIISLV--GERGREVREFIEDYL-GDNLKKSVVVVATSDESPI 229
           GK+ + +    +     VI   V  G++   V + +      D ++ +++V  T+D    
Sbjct: 175 GKTAIATDAIVNQKGSGVICVYVAIGQKASSVAQIVTTLQEKDAMRYTIIVSETADSPAT 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP T   +AEYF   G + L+I D +++ A + RE++      P    YP  VF  
Sbjct: 235 LQYLAPYTGAALAEYFMYSGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYL 294

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER         +G++TA+  +   G + +  I  +V SI DG I L+  +   G 
Sbjct: 295 HSRLLERAAKLSDALGEGSMTALPVIETQGGDVSAYIPTNVISITDGQIFLSADIFNAGI 354

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P ++   SVSR+   A     K++ S L   + +F E
Sbjct: 355 RPAINVGISVSRVGSAAQVKAMKQVASKLKLELAQFSE 392


>gi|161511797|emb|CAP16909.1| ATP synthase alpha subunit [Pediococcus damnosus]
          Length = 333

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 146/316 (46%), Gaps = 17/316 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  ++I  GD V   GR    P      GRV+N LG+PIDG   
Sbjct: 24  GMVQNLESNDVGIVILGNYDDIREGDTVKRTGRIMEVPVGEALIGRVVNTLGQPIDGKGE 83

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D +  +  K P  M RQ V + F+TGI+ ID   P+  GQR  +      GK++L 
Sbjct: 84  I-KTDHTRPVERKAPGVMERQSVSEPFQTGIKAIDSLVPIGRGQRELIIGDRKTGKTSLA 142

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK------SVVVVATSDESPIL 230
             ++  + +     I   +G++   VR  +     D L+K      ++V+ A   E   +
Sbjct: 143 IDTILNQKNQNIICIYVAIGQKESTVRTQV-----DTLEKFGAMDYTIVLSAGPSEPAPM 197

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + E F   G +VL++ D +++ A + RE++      P    YP  +F   
Sbjct: 198 LYLAPYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTH 257

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  V     +    I  +V SI DG I L+  L   G  
Sbjct: 258 SRLLERAAKLNDKLGAGSMTALPFVETKAGDIAAYIPTNVISITDGQIFLDSDLFYSGTR 317

Query: 349 PPVDPLASVSRLADKA 364
           P +D  +SVSR+   A
Sbjct: 318 PAIDAGSSVSRVGGDA 333


>gi|6688905|emb|CAB65323.1| ATP synthase beta subunit [Oxalis triangularis subsp. papilionacea]
 gi|6688907|emb|CAB65324.1| ATP synthase beta subunit [Oxalis triangularis subsp. papilionacea]
 gi|14718157|gb|AAK72817.1| ATP synthase beta subunit [Oxalis dillenii]
          Length = 273

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 14/228 (6%)

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  G   RE
Sbjct: 30  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRE 89

Query: 205 FIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
             + Y+          +N+ +S V  V    +E P  R    LTA+T+AE+F    + +V
Sbjct: 90  GNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDV 149

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 150 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQA 207

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 208 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 255


>gi|270291022|ref|ZP_06197245.1| ATP synthase F1, alpha subunit [Pediococcus acidilactici 7_4]
 gi|304385298|ref|ZP_07367643.1| ATP synthase F1 sector alpha subunit [Pediococcus acidilactici DSM
           20284]
 gi|270280418|gb|EFA26253.1| ATP synthase F1, alpha subunit [Pediococcus acidilactici 7_4]
 gi|304328505|gb|EFL95726.1| ATP synthase F1 sector alpha subunit [Pediococcus acidilactici DSM
           20284]
          Length = 505

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 148/323 (45%), Gaps = 7/323 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G V  +  + V I  +G  +EI  GD V   GR    P      GRV+N LG+P+DG  +
Sbjct: 61  GMVQNLESNDVGIVIMGNYDEIHEGDTVKRTGRIMEVPVGDALIGRVVNPLGEPLDGKGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + K D +  +  K P  M R+ V++  +TGI+ ID   P+  GQR  +      GK+ L 
Sbjct: 121 I-KTDKTRPVEHKAPGVMQRKSVDQPLQTGIKAIDSLVPIGRGQRELIIGDRKTGKTALA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           +         D + I + +G++   VR  +E       +  ++VV A   E   L  +AP
Sbjct: 180 IDTILNQKNEDMICIYVAIGQKESTVRTQVETLRRYGAMDYTIVVSAGPSEPAPLLYLAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                + E F   G +VL++ D +++ A + RE++      P    YP  +F    RLLE
Sbjct: 240 YAGAAMGEEFMYNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  V     + +  I  +V SI DG + L+      G  P +D 
Sbjct: 300 RAAKLSDDLGGGSMTALPFVETKAGDVSAYIPTNVISITDGQVFLDSDYFHSGVRPAIDA 359

Query: 354 LASVSRLADKAWSADEKKLVSSL 376
             SVSR+   A     KK+  +L
Sbjct: 360 GTSVSRVGGDAQIKAMKKVSGTL 382


>gi|291615438|ref|YP_003525595.1| ATP synthase F1, subunit alpha [Sideroxydans lithotrophicus ES-1]
 gi|291585550|gb|ADE13208.1| ATP synthase F1, alpha subunit [Sideroxydans lithotrophicus ES-1]
          Length = 513

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 178/386 (46%), Gaps = 33/386 (8%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDG 115
           +  G  + +  D V    +G  E I+ GD V   GR    P      GRV+NALG+PIDG
Sbjct: 58  NTFGLALNLERDSVGAVILGEYEHITEGDTVKCTGRILEVPVGPELRGRVVNALGQPIDG 117

Query: 116 DDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
                KG ++ ++  K+    P  + R+ V++  +TG++ ID   P+  GQR  +     
Sbjct: 118 -----KGPVNAKMTDKIEKVAPGVIARKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQ 172

Query: 172 IGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDE 226
            GK+ +   ++  +       I   VG++   V   +   E++    L+ ++VV AT+ +
Sbjct: 173 TGKTAVAVDAIINQKGQNMTCIYVAVGQKASTVANVVRKLEEH--GALEYTIVVAATASD 230

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S  ++ +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  V
Sbjct: 231 SAAMQFLAPYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDV 290

Query: 287 FSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           F    RLLER              G  + + G++TA+  +     + +  +  +V SI D
Sbjct: 291 FYLHSRLLERAARVNAEYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITD 350

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G I L   L   G  P ++   SVSR+   A +   KKL   +   + ++   R++    
Sbjct: 351 GQIFLEADLFNAGIRPAINAGVSVSRVGGAAQTKVIKKLGGGVRLALAQY---RELAAFA 407

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   +D    K + +  ++ + +KQ
Sbjct: 408 QFASDLDESTRKQLERGRLVTELMKQ 433


>gi|229147848|ref|ZP_04276189.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST24]
 gi|228635498|gb|EEK91987.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST24]
          Length = 502

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 147/317 (46%), Gaps = 10/317 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P     EI  GD V   GR    P      GRV+N LG+P+DG   +   + 
Sbjct: 70  NVGIIILGPY---TEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--LLSMFA 182
           +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   L ++  
Sbjct: 126 TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIIN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L+ ++VV A++ +   L  +AP   VT+
Sbjct: 186 QKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 305

Query: 302 KEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             K  G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVSR
Sbjct: 306 DAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSR 365

Query: 360 LADKAWSADEKKLVSSL 376
           +   A      K+  +L
Sbjct: 366 VGGSAQIKAMSKVSGTL 382


>gi|126655520|ref|ZP_01726959.1| ATP synthase subunit A [Cyanothece sp. CCY0110]
 gi|126622999|gb|EAZ93704.1| ATP synthase subunit A [Cyanothece sp. CCY0110]
          Length = 503

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 15/338 (4%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD 116
            +G  + +  D V    +G G +I  G  V   G+    P      GRV+++LG+PIDG 
Sbjct: 60  TIGIALNLEEDNVGAVLMGTGLDIQEGSTVQATGKIAQVPVGDAMVGRVVDSLGRPIDG- 118

Query: 117 DSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
               KGD++      I S  P  + R+ V +  +TGI  ID   P+  GQR  +      
Sbjct: 119 ----KGDINTSESRLIESPAPGIIARKSVCEPMQTGITAIDAMIPIGRGQRELIIGDRKT 174

Query: 173 GKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229
           GK+ + +         D + + + +G++   V + I        +  ++VV A +++   
Sbjct: 175 GKTAIAIDTIINQKSEDVICVYVAIGQKASTVAQVIGTLEEKGAMDYTIVVAANANDPAT 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP T  T+AEYF  KG   L+I D +++ A + R+++      P    YP  VF  
Sbjct: 235 LQYLAPYTGATLAEYFMYKGKATLVIYDDLSKQAQAYRQLSLLLKRPPGREAYPGDVFYI 294

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER          G++TA+  +     + +  I  +V SI DG I L+  L   G 
Sbjct: 295 HSRLLERAAKLSDALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGF 354

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            P ++   SVSR+   A +   K++   L   + +F E
Sbjct: 355 RPAINAGISVSRVGSAAQTKAMKQVAGKLKLELAQFAE 392


>gi|289743715|gb|ADD20605.1| vacuolar H+-ATPase v1 sector subunit B [Glossina morsitans
           morsitans]
          Length = 488

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 96  LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 154

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     K+               + + +G 
Sbjct: 155 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKIPGKSVLDDQEDNFAIVFAAMGV 214

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 215 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 274

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 275 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 334

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 335 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 383


>gi|330684799|gb|EGG96492.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU121]
          Length = 502

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 151/326 (46%), Gaps = 10/326 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ +V + P     +IS GD V   GR    P      GRV+N LG+PIDG   +     
Sbjct: 70  NVGVVILGPY---TDISEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPI-NATK 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFAR 183
           +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+ +     
Sbjct: 126 TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTILN 185

Query: 184 SDCFDKVIISL-VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
               D + I + +G++   VR  +E       L  ++VV A++ E   L  +AP   VT+
Sbjct: 186 QKTEDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYAGVTM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 GEEFMFNGKHVLIVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 DDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEE 385
           +   A     KK+  +L   +  + E
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLASYRE 391


>gi|307203836|gb|EFN82772.1| Vacuolar ATP synthase subunit B [Harpegnathos saltator]
          Length = 495

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 103 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDY-LDIQGQPINPWSRIYPEEMIQTGISAI 161

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     KV               + + +G 
Sbjct: 162 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKVPGKSVLDSHEDNFAIVFAAMGV 221

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 222 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 281

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 282 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 341

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 342 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 390


>gi|320108424|ref|YP_004184014.1| ATP synthase F1 subunit alpha [Terriglobus saanensis SP1PR4]
 gi|319926945|gb|ADV84020.1| ATP synthase F1, alpha subunit [Terriglobus saanensis SP1PR4]
          Length = 515

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 171/371 (46%), Gaps = 24/371 (6%)

Query: 63  IRINLDIVYICPVGIGEE--ISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119
           + +NLD   +  V +G+   IS GD V   G+    P      GRV+NALG+PID     
Sbjct: 63  LAMNLDEDQVGAVLLGDYTLISEGDQVKRTGKIMSVPVGDAMIGRVVNALGQPIDD---- 118

Query: 120 GKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            KG +    S+ I    P  + R+ V +   TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 -KGPIDTPHSLPIERLAPGVIARKSVTEPMATGIKAIDTMIPIGRGQRELLIGDRQTGKT 177

Query: 176 TL-LSMFARSDCFDKV-IISLVGERGREVREFI---EDYLGDNLKKSVVVVATSDESPIL 230
            + L     S   D + I   +G++   V + +   E+Y    +K ++VV AT+ E   +
Sbjct: 178 AIALDTIINSAKNDLICIYCAIGQKRSSVAQIVQTLEEY--GAMKYTIVVAATASEPAPM 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP  A  + EYF   G + L+I D +++ A S REI+      P    YP  VF   
Sbjct: 236 NYLAPFAATAMGEYFRDNGKHALIIYDDLSKHAASYREISLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 296 SRLLERSAKMSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A     K++ ++L   + ++   R++     +   +D    K ++
Sbjct: 356 PAVNVGLSVSRVGFSAAIKATKQVGATLKLDLAQY---RELAAFAQFGSDLDPATQKQLN 412

Query: 409 QVPIIYDFLKQ 419
           +   + + LKQ
Sbjct: 413 RGKRLTELLKQ 423


>gi|302689801|ref|XP_003034580.1| hypothetical protein SCHCODRAFT_66894 [Schizophyllum commune H4-8]
 gi|300108275|gb|EFI99677.1| hypothetical protein SCHCODRAFT_66894 [Schizophyllum commune H4-8]
          Length = 516

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 22/326 (6%)

Query: 60  GQVIRIN--LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +     IV +     G ++    + F     R+  +    GR+ N  G PID   
Sbjct: 69  GQVLEVQGKKAIVQVFEGTSGVDVKATHVEFTGHSMRLPVAEDMLGRIFNGSGNPIDQGP 128

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R   E+  +TGI  ID    +  GQ+I +F+ +G+  + +
Sbjct: 129 KVFAEDY-LDINGSPINPYSRIYPEEMIQTGISTIDTMNSIARGQKIPIFSAAGLPHNEI 187

Query: 178 LSMFARSDCFDK-----------------VIISLVGERGREVREFIEDYLGD-NLKKSVV 219
            +   R     K                 V+ + +G      R F ED+  + +L +  +
Sbjct: 188 AAQIVRQAGLVKRPGNSKGIHDGHEDNFSVVFAAMGVNMETARFFKEDFESNGSLDRVTL 247

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278
            +  +++  I R + P  A+T AEY++ + + +VL IL  ++ +A ++RE++    E+P 
Sbjct: 248 FLNLANDPTIERIITPRLALTTAEYYAYQLEKHVLTILTDMSSYADALREVSAAREEVPG 307

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            RGYP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    I +G I +
Sbjct: 308 RRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIFV 367

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA 364
           +R L     YPP++ L S+SRL   A
Sbjct: 368 DRQLHNRQIYPPINVLPSLSRLMKSA 393


>gi|299830569|ref|YP_003735017.1| ATP synthase CF1 alpha subunit [Durinskia baltica]
 gi|297384933|gb|ADI40232.1| ATP synthase CF1 alpha subunit [Durinskia baltica]
          Length = 504

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 157/335 (46%), Gaps = 9/335 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  D V +  +G G +I  G  V   GR  +I     + GRV+NALG PIDG 
Sbjct: 60  TIGIALNLENDNVGVVLMGTGRQILEGSTVKATGRIAQIPVGEGFLGRVVNALGAPIDGK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +  + + +  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEIASTETQL-LEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLVG--ERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRK 232
           +      +   + VI   VG  ++   V + + + L +   +  +++V A++++   L+ 
Sbjct: 179 IAIDTIINQKKENVICVYVGVGQKASTVAQVV-NVLEEKGAMSYTIIVSASANDPATLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     +AEYF  KG   L+I D +T+ A + R+++      P    YP  VF    R
Sbjct: 238 IAPYAGAALAEYFMYKGKATLVIYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++TA+  +     + +  I  +V SI DG I L+  L   G  P 
Sbjct: 298 LLERAAKLSDALGGGSMTALPVIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           ++   SVSR+   A +   KK+   L   + +F E
Sbjct: 358 INVGISVSRVGSAAQTKAMKKVAGKLKLELAQFAE 392


>gi|169826598|ref|YP_001696756.1| ATP synthase subunit alpha [Lysinibacillus sphaericus C3-41]
 gi|226739907|sp|B1HM54|ATPA_LYSSC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|168991086|gb|ACA38626.1| ATP synthase subunit alpha [Lysinibacillus sphaericus C3-41]
          Length = 502

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 10/334 (2%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ IV + P     +I  GD V   GR    P      GRV+N LG+P+DG   +     
Sbjct: 70  NVGIVILGPY---TDIKEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVDGQGPINTTK- 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFAR 183
           S  I S     M R+ V +  +TGI+ ID   P+  GQR  +     +GK+++ +     
Sbjct: 126 SRPIESPAFGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQVGKTSVAIDTILN 185

Query: 184 SDCFDKVIISL-VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
            D  + + I + +G++   VR  +E       L  ++VV A + +   L  +AP   V++
Sbjct: 186 QDGENMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTAAASQPAPLLFLAPFAGVSM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 246 AEEFMLQGKHVLIVYDDLSKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 305

Query: 302 K--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 306 ETYQNGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFNSGVRPAINAGLSVSR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           +   A     KK+  +L   +  F E       G
Sbjct: 366 VGGSAQIKAMKKVAGTLRLDLAAFRELESFAQFG 399


>gi|118721470|dbj|BAF38479.1| vacuolar H+-ATPase subunit B [Zostera marina]
          Length = 488

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 23/285 (8%)

Query: 101 WCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
             GR+ N  GKPID G   L +  L +   S + P+  R   E+  +TGI  ID+   + 
Sbjct: 101 MLGRIFNGSGKPIDNGPPILPEAYLDIS-GSSINPS-ERTYPEEMIQTGISTIDVMNSIA 158

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK------------------VIISLVGERGRE 201
            GQ+I +F+ +G+  + + +   R     K                  ++ + +G     
Sbjct: 159 RGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTANLLEDGEEDNFAIVFAAMGVNMET 218

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSI 259
            + F  D+  + ++K+  + +  +++  I R + P  A+T AEY + + G +VL+IL  +
Sbjct: 219 AQFFKRDFEENGSMKRVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDM 278

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           + +A ++RE++    E+P  RGYP  ++++L  + ER G  E  KG+IT +  + +  D+
Sbjct: 279 SSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDD 338

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
              P  D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 339 ITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSA 383


>gi|81580386|sp|Q814W0|ATPA_BACCR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|29898900|gb|AAP12171.1| ATP synthase alpha chain [Bacillus cereus ATCC 14579]
 gi|118419571|gb|ABK87990.1| ATP synthase F1 subcomplex alpha subunit [Bacillus thuringiensis
           str. Al Hakam]
          Length = 505

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 147/317 (46%), Gaps = 10/317 (3%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
           N+ I+ + P     EI  GD V   GR    P      GRV+N LG+P+DG   +   + 
Sbjct: 73  NVGIIILGPY---TEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN- 128

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--LLSMFA 182
           +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   L ++  
Sbjct: 129 TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIIN 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   VR  +E       L+ ++VV A++ +   L  +AP   VT+
Sbjct: 189 QKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVTM 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 249 GEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 308

Query: 302 KEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             K  G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVSR
Sbjct: 309 DAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSR 368

Query: 360 LADKAWSADEKKLVSSL 376
           +   A      K+  +L
Sbjct: 369 VGGSAQIKAMSKVSGTL 385


>gi|303263059|ref|ZP_07348991.1| ATP synthase subunit A [Streptococcus pneumoniae SP14-BS292]
 gi|302635822|gb|EFL66325.1| ATP synthase subunit A [Streptococcus pneumoniae SP14-BS292]
          Length = 504

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 151/315 (47%), Gaps = 11/315 (3%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK--GDLSM 126
           V I  +G   +I  GD +   G+    P      GRV++ LG+P+DG   LG+   D + 
Sbjct: 74  VGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDG---LGEIHTDKTR 130

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARS 184
            + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+   ++  + 
Sbjct: 131 PVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTILNQK 190

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           D     I   +G++   VR  +E       L  ++VV A++ +   L  +AP T V +AE
Sbjct: 191 DQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPYTGVAMAE 250

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER      E
Sbjct: 251 EFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLERSAKVSDE 310

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  +SVSR+ 
Sbjct: 311 LGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAGSSVSRVG 370

Query: 362 DKAWSADEKKLVSSL 376
             A     KK+  +L
Sbjct: 371 GSAQIKAMKKVAGTL 385


>gi|241958784|ref|XP_002422111.1| V-ATPase B subunit, putative; vacuolar ATP synthase subunit B,
           putative; vacuolar proton pump B subunit, putative
           [Candida dubliniensis CD36]
 gi|223645456|emb|CAX40113.1| V-ATPase B subunit, putative [Candida dubliniensis CD36]
          Length = 511

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 17/293 (5%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F     +I  S    GR+ +  G+PID    +   D  ++I         R   E+   T
Sbjct: 95  FTGENLKIPVSEDMLGRIFDGSGRPIDKGPKIFAEDY-LDINGSPINPYARIYPEEMIST 153

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--------DCFD------KVIIS 193
           G+  ID    +  GQ+I +F+ SG+  + + +   R         D  D       ++ +
Sbjct: 154 GVSAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFA 213

Query: 194 LVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-N 251
            +G      R F +D+  + +L+++ + +  +++  I R + P  A+T AE+ + + + +
Sbjct: 214 AMGVNLETSRFFKQDFEENGSLERTTLFLNLANDPTIERIITPRLALTTAEFLAYQTERH 273

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL IL  ++ +A ++RE++    E+P  RGYP  ++++L  + ER G  E   G+IT V 
Sbjct: 274 VLTILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQVP 333

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            + +  D+   PI D    I +G I ++R L   G YPP++ L S+SRL   A
Sbjct: 334 ILTMPNDDITHPIPDLTGYITEGQIFIDRQLHNRGIYPPINVLPSLSRLMKSA 386


>gi|262283122|ref|ZP_06060889.1| F0F1 ATP synthase subunit alpha [Streptococcus sp. 2_1_36FAA]
 gi|262261374|gb|EEY80073.1| F0F1 ATP synthase subunit alpha [Streptococcus sp. 2_1_36FAA]
          Length = 501

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 18/337 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G + + Q   S+++G +I           +G   +I  GD +   G+    P      GR
Sbjct: 58  GSYGMAQNLESNDVGIII-----------LGDFTDIREGDTIRRTGKIMEVPVGEALIGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+  GQR 
Sbjct: 107 VVDPLGRPVDGLGDIAT-DKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRE 165

Query: 165 GVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKKSVVVV 221
            +      GK+T+ +         D + I + +G++   VR  +E       L  ++VV 
Sbjct: 166 LIIGDRQTGKTTIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVT 225

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P    
Sbjct: 226 ASASQPSPLLYLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREA 285

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I L+
Sbjct: 286 FPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLS 345

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            SL   G  P +D  +SVSR+   A     KK+  +L
Sbjct: 346 DSLFNAGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTL 382


>gi|305682112|ref|ZP_07404916.1| ATP synthase F1, alpha subunit [Corynebacterium matruchotii ATCC
           14266]
 gi|305658585|gb|EFM48088.1| ATP synthase F1, alpha subunit [Corynebacterium matruchotii ATCC
           14266]
          Length = 542

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 178/379 (46%), Gaps = 24/379 (6%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  
Sbjct: 63  IGVAQNLDTDRVGVVILGNYETLKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLG 122

Query: 118 SL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
           ++  + D  +E+  + P  + R+ V +  +TGI+ ID  TP+  GQR  +      GK+ 
Sbjct: 123 AIEAEEDRVLEL--QAPSVLQRKPVGEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTA 180

Query: 176 ----TLLSMFARSDCFDKV-----IISLVGERGR---EVREFIEDYLGDNLKKSVVVVAT 223
               T+L+  A  +  DK      I   +G++G     VR+ +ED+    L+ + +V A 
Sbjct: 181 VCIDTILNQKANWESGDKTKQVRCIYVAIGQKGSTVAAVRKTLEDH--GALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPFAGAALGQHWMYQGYHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERAAKLSDDMGGGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFATFASDLDP 415

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                + +   + + LKQ+
Sbjct: 416 ASKAQLDRGARLVELLKQA 434


>gi|71082937|ref|YP_265656.1| F0F1 ATP synthase subunit alpha [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762639|ref|ZP_01264604.1| ATP synthase subunit A [Candidatus Pelagibacter ubique HTCC1002]
 gi|115312260|sp|Q4FP36|ATPA_PELUB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71062050|gb|AAZ21053.1| H+-transporting two-sector ATPase (F0F1-type ATP synthase) alpha
           chain [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718441|gb|EAS85091.1| ATP synthase subunit A [Candidatus Pelagibacter ubique HTCC1002]
          Length = 511

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 175/375 (46%), Gaps = 19/375 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V +   G   +I  GD+V   G    +P      GRV++ LG PIDG  +
Sbjct: 61  GMALNLESENVGVVIFGDDRKIKEGDVVKRTGSIVDTPVGKELLGRVVDGLGNPIDGKGA 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           L K      +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK+   
Sbjct: 121 LDKATKRSRVEVKAPGIIPRQSVSEPMQTGLKSIDSLVPVGRGQRELIIGDRQTGKTAVA 180

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGD--NLKKSVVVVATSDE 226
              +++    ++  D+      I   +G++   VR+ I+  L +   ++ + +V AT+ +
Sbjct: 181 IDAIINQKKINESGDEKQKLYCIYVAIGQKRSTVRQ-IQKTLEEAGAMEYTTIVAATASD 239

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           +  L+ +AP T  T+ EY+   G + L+I D +++ A + R+++      P    YP  V
Sbjct: 240 AAPLQFLAPYTGCTMGEYYRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 299

Query: 287 FSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      E   G++TA+  +   G + +  I  +V SI DG I L   L  
Sbjct: 300 FYLHSRLLERAAKLSDEHGGGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFN 359

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P ++   SVSR+   A +   KK+  S+   + ++   R++     +   +D    
Sbjct: 360 QGIRPAINVGLSVSRVGSAAQTKAMKKVSGSMKLELAQY---REMAAFAQFGSDLDASTQ 416

Query: 405 KAVHQVPIIYDFLKQ 419
           K +++   + + LKQ
Sbjct: 417 KLLNRGSKLTELLKQ 431


>gi|85119497|ref|XP_965645.1| ATP synthase alpha chain, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|584806|sp|P37211|ATPA_NEUCR RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|168759|gb|AAA33560.1| mitochondrial ATPase alpha-subunit [Neurospora crassa]
 gi|28927457|gb|EAA36409.1| ATP synthase alpha chain, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 551

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 17/330 (5%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ALG PIDG   +   +       K P  + RQ V +  +TG++ +D   P+  GQ
Sbjct: 146 GRVIDALGNPIDGKGPINCKE-KRRAQLKAPGILPRQSVNQPVQTGLKSVDAMVPIGRGQ 204

Query: 163 RIGVFAGSGIGKSTLL--------SMFARSDCFDKV--IISLVGERGREVREFIEDYL-G 211
           R  +      GK+ +            + SD   K+  +   VG++   V + ++     
Sbjct: 205 RELIIGDRQTGKTAVALDAILNQKRWNSGSDEDKKLYCVYVAVGQKRSTVAQLVKTLEEN 264

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D +K S+VV AT+ E+  L+ +AP T   + EYF   G + L+I D +T+ A + R+++ 
Sbjct: 265 DAMKYSIVVAATASEAAPLQYLAPFTGACVGEYFRDNGKHSLVIFDDLTKQAVAYRQMSL 324

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVR 329
                P    YP  VF    RLLER     K    G++TA+  +   G + +  I  +V 
Sbjct: 325 LLRRPPGREAYPGDVFYLHSRLLERAAKMNKTHGGGSMTALPVIETQGGDVSAYIPTNVI 384

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SI DG I L   L  +G  P ++   SVSR+   A     K++  SL   + ++   R++
Sbjct: 385 SITDGQIFLESELFYKGVRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQY---REV 441

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                +   +D    + +++   + + LKQ
Sbjct: 442 AAFAQFGSDLDAATKQTLNRGERLTELLKQ 471


>gi|187920246|ref|YP_001889277.1| F0F1 ATP synthase subunit alpha [Burkholderia phytofirmans PsJN]
 gi|187718684|gb|ACD19907.1| ATP synthase F1, alpha subunit [Burkholderia phytofirmans PsJN]
          Length = 522

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 6/267 (2%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVI+ LG+P+D D+ +    + M      P  + R  V +  +TG+ ++D    +  GQ
Sbjct: 108 GRVIDPLGRPLDRDEPIVAA-MRMPAERPAPSIVERDLVSEPVETGVLLVDALFAIGRGQ 166

Query: 163 RIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGERGREVREFIEDYLGDNL-KKSVV 219
           R  +      GK++L +         D + + + +G+R   V+  IE        ++ + 
Sbjct: 167 RELIIGDRATGKTSLAIDAIVNQKQSDMICVYVAIGQRTTAVQRVIEAVRQYGAPERCIF 226

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVAT+  +P L+ +AP   +T+AEYF  +G + L+++D +T+ A + RE+A  + E P  
Sbjct: 227 VVATAASAPGLQWIAPFAGITVAEYFRDRGQHALVVIDDLTKHAATHRELALLTREPPGR 286

Query: 280 RGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  +F    RLLER     ++   G++TA+     D  N +  I  ++ SI DG IV
Sbjct: 287 EAYPGDIFYVHARLLERAARLSTKLGGGSLTALPIAETDAGNLSAYIPTNLISITDGQIV 346

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA 364
           ++ +L    + P VD   SVSR+  KA
Sbjct: 347 MDAALFAANQRPAVDIGLSVSRVGGKA 373


>gi|56417187|ref|YP_154261.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str. St.
           Maries]
 gi|222475552|ref|YP_002563969.1| F1-ATP synthase alpha subunit (atpA) [Anaplasma marginale str.
           Florida]
 gi|254995355|ref|ZP_05277545.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str.
           Mississippi]
 gi|255004668|ref|ZP_05279469.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str. Virginia]
 gi|81599091|sp|Q5P9M4|ATPA_ANAMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807671|sp|B9KH09|ATPA_ANAMF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56388419|gb|AAV87006.1| F1-ATP synthase alpha subunit [Anaplasma marginale str. St. Maries]
 gi|222419690|gb|ACM49713.1| F1-ATP synthase alpha subunit (atpA) [Anaplasma marginale str.
           Florida]
          Length = 507

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 153/348 (43%), Gaps = 15/348 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDS 118
           G V  +  D   +   G   EI  GD V   G     P+     GRV+N LG P+DG ++
Sbjct: 62  GVVAGLERDTCSVVVFGEDREIREGDSVQCTGELMTVPAGLSVLGRVVNPLGSPVDGGNA 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           +   D  + + +K P  M RQ V +  +TGI+ +D+  P+  GQR  V      GK+   
Sbjct: 122 I-VADSRLPVEAKAPGIMARQPVCEPLQTGIKTVDMLIPIGRGQRELVIGDRKTGKTAIA 180

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESP 228
             T+++    +D  D       I   +G++   +   +            +VVA     P
Sbjct: 181 LDTIINQKKTNDTADAKNRMYCIYVAIGQKNSSIARVVHKLKETGAMDYTIVVAAGASDP 240

Query: 229 I-LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           + ++ +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF
Sbjct: 241 VSIQYLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 301 YIHSRLLERAAKLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFHK 360

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G  P ++   SVSR+   A     KK+  S+   + ++ E  D    G
Sbjct: 361 GFRPAINVGLSVSRVGSAAQVKSVKKVAGSMKLTLAQYRELEDFARFG 408


>gi|321260106|ref|XP_003194773.1| ATP synthase alpha chain, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317461245|gb|ADV22986.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 540

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 157/340 (46%), Gaps = 15/340 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G    I  GD V   G+    P      GRV++ALG PIDG   
Sbjct: 92  GMCLNLEADNVGVTIFGNDRLIKEGDTVKRTGQIVDVPVGPGLLGRVVDALGNPIDGKGP 151

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           + K     +   K P  + R+ V +  +TG++ +D   P+  GQR  +      GKS   
Sbjct: 152 I-KAAGRTKAQLKAPGILPRRSVHEPMQTGLKSVDSLVPIGRGQRELIIGDRQTGKSAVA 210

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
             T+L+    +D  D+      +   VG++   V + ++     D +K S++V AT+ E+
Sbjct: 211 IDTILNQKKWNDGADESKKLYCVYVAVGQKRSTVAQLVQTLEQNDAMKYSIIVAATASEA 270

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 271 APLQYLAPFSGCAMGEWFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 330

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +   G + +  I  +V SI DG I L   L  +
Sbjct: 331 YLHSRLLERAAKMNADYGAGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFK 390

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           G  P ++   SVSR+   A +   K +  SL   + ++ E
Sbjct: 391 GVRPAINVGLSVSRVGSAAQTKLMKSVAGSLKLYLAQYRE 430


>gi|255003542|ref|ZP_05278506.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str. Puerto
           Rico]
          Length = 507

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 153/348 (43%), Gaps = 15/348 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDS 118
           G V  +  D   +   G   EI  GD V   G     P+     GRV+N LG P+DG ++
Sbjct: 62  GVVAGLERDTCSVVVFGEDREIREGDSVQCTGELMTVPAGLSVLGRVVNPLGSPVDGGNA 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           +   D  + + +K P  M RQ V +  +TGI+ +D+  P+  GQR  V      GK+   
Sbjct: 122 I-VADSRLPVEAKAPGIMARQPVCEPLQTGIKTVDMLIPIGRGQRELVIGDRKTGKTAIA 180

Query: 176 --TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESP 228
             T+++    +D  D       I   +G++   +   +            +VVA     P
Sbjct: 181 LDTIINQKKTNDTADAKNRMYCIYVAIGQKNSSIARVVHKLKETGAMDYTIVVAAGASDP 240

Query: 229 I-LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           + ++ +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF
Sbjct: 241 VSIQYLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 301 YIHSRLLERAAKLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFHK 360

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G  P ++   SVSR+   A     KK+  S+   + ++ E  D    G
Sbjct: 361 GFRPAINVGLSVSRVGSAAQVKSVKKVAGSMKLTLAQYRELEDFARFG 408


>gi|323223792|gb|EGA08096.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
          Length = 253

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 101/194 (52%), Gaps = 4/194 (2%)

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
           K  + L +V+ IN     + P      +  G  V    R    P      GRVI+  G+P
Sbjct: 49  KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLGRVIDGFGRP 108

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG +         + M   PPAM RQ + +   TGIR ID       GQR+G+F+  G+
Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           GKSTLL+M   +   D  ++ L+GERGREVREFI+  L +   K+ V+VVATSD   + R
Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226

Query: 232 KMAPLTAVTIAEYF 245
             A   A TIAE+F
Sbjct: 227 VRALFVATTIAEFF 240


>gi|225544109|ref|YP_002720097.1| atpA [Jatropha curcas]
 gi|224979550|gb|ACN72677.1| atpA [Jatropha curcas]
          Length = 507

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 10/371 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            +G  + +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG 
Sbjct: 60  TIGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGR 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   + S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ 
Sbjct: 120 GEISASE-SRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTA 178

Query: 177 LLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKM 233
           + +    +     VI   V  G++   V + +         +  +VVA + +SP  L+ +
Sbjct: 179 VATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYL 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 239 APYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRL 298

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER   S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +
Sbjct: 299 LERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAI 358

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++   L   + +F E   +     +   +D      + +  
Sbjct: 359 NVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAE---LEAFAQFASDLDKATQNQLARGQ 415

Query: 412 IIYDFLKQSPS 422
            + + LKQS S
Sbjct: 416 RLRELLKQSQS 426


>gi|328855484|gb|EGG04610.1| hypothetical protein MELLADRAFT_44147 [Melampsora larici-populina
           98AG31]
          Length = 524

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 157/334 (47%), Gaps = 31/334 (9%)

Query: 60  GQVIRIN--LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117
           GQV+ +N    IV +     G ++    + F     ++  S    GR+ N  G+PID   
Sbjct: 67  GQVLEVNGKKAIVQVFEGTSGIDVKATHVEFSGSSMKLPVSEDMLGRIFNGSGQPIDKGP 126

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D  ++I        +R   E+  +TGI  ID    +  GQ+I +F+ +G+  + +
Sbjct: 127 KVFAEDY-LDINGSPINPYSRIYPEEMIQTGISTIDAMNSIARGQKIPIFSAAGLPHNEI 185

Query: 178 LSMFARS-------------------------DCFDKVIISLVGERGREVREFIEDYLGD 212
            +   R                          D F  ++ + +G      R F +D+  +
Sbjct: 186 AAQICRQAGLVNKGGVNPGQGKPTKSVHDDHEDNF-SIVFAAMGVNMETARFFRQDFEEN 244

Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270
            +L +  + +  +++  I R + P  A+T AEYF+ + + +VL+IL  ++ +A ++RE++
Sbjct: 245 GSLDRVTLFLNLANDPTIERIITPRLALTTAEYFAYQLEKHVLVILTDMSSYADALREVS 304

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
               E+P  RGYP  ++++L  + ER G  E   G+IT +  + +  D+   PI D    
Sbjct: 305 AAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGY 364

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           I +G I ++R L  +  YPP++ L S+SRL   A
Sbjct: 365 ITEGQIFVDRQLHNKQIYPPINVLPSLSRLMKSA 398


>gi|228017369|gb|ACP52186.1| ATP synthase CF1 alpha subunit [Larix occidentalis]
 gi|307683505|dbj|BAJ19731.1| ATP synthase CF1 alpha chain [Larix decidua]
          Length = 507

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 18/336 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           SDN+G V+           +G G  I  G  V   G+    P S  + GRV+NAL +PID
Sbjct: 69  SDNVGAVL-----------MGDGLTIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK
Sbjct: 118 GKGQISASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCFDKVIISLV--GERGREVREFIEDYLGDNLKKSVVVVATSDESP-ILR 231
           + + +    +     VI   V  G++   V + +  +      +  +VVA + +SP  L+
Sbjct: 177 TAVATDTILNQKGQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSPATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YLAPYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     S   +G++TA+  V     + +  I  +V SI DG I L+  L   G  P
Sbjct: 297 RLLERAAKLSSLLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            ++   SVSR+   A     KK+   L   + +F E
Sbjct: 357 AINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAE 392


>gi|302138846|gb|ADK94761.1| vacuolar V-type H(+)-ATPase B subunit [Helicoverpa armigera]
          Length = 494

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 102 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 160

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---------------IISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     K+               + + +G 
Sbjct: 161 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKIPGKSVLDDHEDNFAIVFAAMGV 220

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 221 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 280

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 281 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 340

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 341 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 389


>gi|257897932|ref|ZP_05677585.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com15]
 gi|257835844|gb|EEV60918.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com15]
          Length = 593

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ +LA
Sbjct: 361 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSTLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 478


>gi|293378187|ref|ZP_06624356.1| ATP synthase ab C-terminal domain protein [Enterococcus faecium
           PC4.1]
 gi|292643051|gb|EFF61192.1| ATP synthase ab C-terminal domain protein [Enterococcus faecium
           PC4.1]
          Length = 593

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ +LA
Sbjct: 361 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSTLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 478


>gi|257865568|ref|ZP_05645221.1| V-type ATPase [Enterococcus casseliflavus EC30]
 gi|257871905|ref|ZP_05651558.1| V-type ATPase [Enterococcus casseliflavus EC10]
 gi|257799502|gb|EEV28554.1| V-type ATPase [Enterococcus casseliflavus EC30]
 gi|257806069|gb|EEV34891.1| V-type ATPase [Enterococcus casseliflavus EC10]
          Length = 595

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 142/298 (47%), Gaps = 25/298 (8%)

Query: 121 KGDLSMEIMSKVP-----PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
           KGD S  ++ K P     P   +    +   TG RVID F P+  G    V    G GK+
Sbjct: 180 KGDRSFTMLQKWPVRHSRPVKQKLNPVEPMITGQRVIDTFFPIAKGGASAVPGPFGAGKT 239

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESP 228
            +    A+    D V+    GERG E+        E I+   G++L    V++A +   P
Sbjct: 240 VVQHQIAKWADVDLVVYVGCGERGNEMTDVMNEFPELIDPRSGESLMARTVLIANTSNMP 299

Query: 229 ILRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           +  + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + 
Sbjct: 300 VAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLG 359

Query: 288 SELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           S L    ER G +      ++G+ITA+ +V   G + ++P+  +   ++     L+ +LA
Sbjct: 360 SRLAEYYERSGKAICLGSDQEGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDATLA 419

Query: 344 EEGRYPPVDPLASVS-------RLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D L S S          D+    D  K V+    ++ +  E  +I RL+G
Sbjct: 420 QKRHFPSIDWLKSYSLYENELGAFLDQQMQVDWSKQVTEAMRMLQKESELSEIVRLVG 477


>gi|239616627|ref|YP_002939949.1| ATP synthase F1, alpha subunit [Kosmotoga olearia TBF 19.5.1]
 gi|259585431|sp|C5CIV6|ATPA_KOSOT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|239505458|gb|ACR78945.1| ATP synthase F1, alpha subunit [Kosmotoga olearia TBF 19.5.1]
          Length = 502

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 156/333 (46%), Gaps = 9/333 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G  + +  D V I  +G   EI  GDLV   GR    P+     GRV+N LG P+DG   
Sbjct: 61  GLALNLEEDNVGIVVLGDYREIKEGDLVKRTGRIIEVPAGEALLGRVVNPLGIPLDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    +  K P  + R+ V+   +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 121 IEASE-HRPVEIKAPGVVMRKPVDTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMA 234
             ++  + D     I   +G++   +   I D L +   ++ + +V AT+++   L  +A
Sbjct: 180 IDTIINQKDQGVYCIYVAIGQKTAVLARII-DKLEETGAMEYTTIVAATANDPATLAYLA 238

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + EYF   G + L+I D +++ A + RE++      P    YP  VF    RLL
Sbjct: 239 PYAGAAMGEYFMYSGKDALVIYDDLSKHAAAYRELSLLLRRPPGREAYPGDVFYLHSRLL 298

Query: 295 ERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +E   G++TA+  +    ++ +  I  +V SI DG I L+ +L   G  P ++
Sbjct: 299 ERAARLNEEHGGGSLTALPIIETLANDVSAYIPTNVISITDGQIYLDPNLFYAGNRPAIN 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
              SVSR+   A     KK+  SL   + ++ E
Sbjct: 359 VGLSVSRVGGSAQIKAMKKIAGSLRLDLAQYRE 391


>gi|313678539|ref|YP_004056279.1| ATP synthase F1 subunit alpha [Mycoplasma bovis PG45]
 gi|312950786|gb|ADR25381.1| ATP synthase F1, alpha subunit [Mycoplasma bovis PG45]
          Length = 528

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 161/348 (46%), Gaps = 10/348 (2%)

Query: 54  KNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGK 111
           K  DN+ G V+ +  ++V +   G    +S GDL    G     P      GRVINA+G+
Sbjct: 54  KFKDNITGLVLNLEEEVVGVAIFGNANALSEGDLCTRTGEVISVPVGNQLTGRVINAIGE 113

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           PIDG   L       EI    P  M+R  V +  +TGI  ID   P+  GQR  +     
Sbjct: 114 PIDGKGPLNNTK-RREIFKVAPGVMSRVEVNEPLETGIIAIDSMIPIGKGQRELIIGDRQ 172

Query: 172 IGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDES 227
            GK+++   ++  + D   K I   +G++   V + I   L D   +  + V+V+ + E 
Sbjct: 173 TGKTSIAIDTIINQKDKNVKCIYVAIGQKNSTVAQ-ITKKLQDAGAMDYTTVIVSGASEL 231

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
              + +AP +   IAE + S+G + L+I D +++ A + R ++      P    YP  VF
Sbjct: 232 APQQYIAPYSGTAIAEEWMSEGKDCLIIYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVF 291

Query: 288 SELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               +LLER     S    G+ITA+  +     + +  I  +V SI DG I    +L   
Sbjct: 292 YLHSQLLERAAKVNSSYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTRENLFHS 351

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G+ P VD   SVSR+   A +   K++ SSL   + ++ E +     G
Sbjct: 352 GQRPAVDVGFSVSRVGSSAQTKAMKEVSSSLKLELAQYNEMQAFAQFG 399


>gi|293572465|ref|ZP_06683445.1| V-type ATP synthase alpha chain [Enterococcus faecium E980]
 gi|315641956|ref|ZP_07896894.1| V-type ATP synthase, subunit A [Enterococcus italicus DSM 15952]
 gi|291607527|gb|EFF36869.1| V-type ATP synthase alpha chain [Enterococcus faecium E980]
 gi|315482378|gb|EFU72921.1| V-type ATP synthase, subunit A [Enterococcus italicus DSM 15952]
          Length = 593

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ +LA
Sbjct: 361 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSTLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 478


>gi|238880017|gb|EEQ43655.1| vacuolar ATP synthase subunit B [Candida albicans WO-1]
          Length = 512

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 17/293 (5%)

Query: 88  FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
           F     +I  S    GR+ +  G+PID    +   D  ++I         R   E+   T
Sbjct: 95  FTGENLKIPVSEDMLGRIFDGSGRPIDKGPKIFAEDY-LDINGSPINPYARIYPEEMIST 153

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--------DCFD------KVIIS 193
           G+  ID    +  GQ+I +F+ SG+  + + +   R         D  D       ++ +
Sbjct: 154 GVSAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFA 213

Query: 194 LVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-N 251
            +G      R F +D+  + +L+++ + +  +++  I R + P  A+T AE+ + + + +
Sbjct: 214 AMGVNLETSRFFKQDFEENGSLERTTLFLNLANDPTIERIITPRLALTTAEFLAYQTERH 273

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL IL  ++ +A ++RE++    E+P  RGYP  ++++L  + ER G  E   G+IT V 
Sbjct: 274 VLTILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQVP 333

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
            + +  D+   PI D    I +G I ++R L   G YPP++ L S+SRL   A
Sbjct: 334 ILTMPNDDITHPIPDLTGYITEGQIFIDRQLHNRGIYPPINVLPSLSRLMKSA 386


>gi|229549266|ref|ZP_04437991.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis ATCC 29200]
 gi|229305503|gb|EEN71499.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis ATCC 29200]
          Length = 518

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 146/323 (45%), Gaps = 7/323 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G    +  + V I  +G  E I  GD V   G+    P      GRV+N LG+P+DG   
Sbjct: 61  GMAQNLETNDVGIIILGDFETIREGDKVQRTGKIMEVPVGEALIGRVVNPLGQPLDGLGE 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           + K D +  + +  P  M RQ V +  +TG++ ID   P+  GQR  V      GK+T+ 
Sbjct: 121 I-KTDKTRPVEATAPGVMQRQSVAEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTTIA 179

Query: 178 LSMFARSDCFDKVIISL-VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           +         D + I + +G++   VR  +E       L  ++VV A + +   L  +AP
Sbjct: 180 IDTIINQKGQDVICIYVAIGQKESTVRNQVETLRKFGALDYTIVVTAGASQPAPLLYIAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 240 YAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD 
Sbjct: 300 RAAKLSDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDA 359

Query: 354 LASVSRLADKAWSADEKKLVSSL 376
             SVSR+   A     KK+  +L
Sbjct: 360 GLSVSRVGGSAQIKAMKKVAGTL 382


>gi|133917180|emb|CAJ33231.1| ATP synthase alpha subunit [Lactobacillus johnsonii]
          Length = 349

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 150/327 (45%), Gaps = 17/327 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  ++I  GD V   GR    P      GRV+N LG+P+DG   + K D +  I
Sbjct: 14  VGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTDKTRPI 72

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCF 187
            SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L L         
Sbjct: 73  ESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTIINQKGQ 132

Query: 188 DKVIISL-VGERGREVREFIEDYLGDNLKK------SVVVVATSDESPILRKMAPLTAVT 240
           D + I + +G++   V+  +E      LK+      ++VV A   E   +  +AP     
Sbjct: 133 DVICIYVAIGQKESTVKNSVE-----TLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 187

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 188 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 247

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 248 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 307

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEE 385
           R+   A     KK+  +L   +  + E
Sbjct: 308 RVGGSAQIKAMKKVAGTLRVDLASYRE 334


>gi|170034654|ref|XP_001845188.1| V-type ATP synthase beta chain [Culex quinquefasciatus]
 gi|2921502|gb|AAC04806.1| B subunit V-ATPase [Culex quinquefasciatus]
 gi|167876059|gb|EDS39442.1| V-type ATP synthase beta chain [Culex quinquefasciatus]
          Length = 492

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 18/289 (6%)

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
            R   S    GRV N  GKPID    +   D  ++I  +     +R   E+  +TGI  I
Sbjct: 100 LRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF-LDIQGQPINPWSRIYPEEMIQTGISAI 158

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VIISLVGE 197
           D+   +  GQ+I +F+ +G+  + + +   R     K               ++ + +G 
Sbjct: 159 DVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKHTGKSVLDDHEENFAIVFAAMGV 218

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESP-ILRKMAPLTAVTIAEYFSSKGD-NVLLI 255
                R F +D+  +   ++V +       P I R + P  A+T AE+ + + + +VL+I
Sbjct: 219 NMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAEFLAYQCEKHVLVI 278

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           L  ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +
Sbjct: 279 LTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTM 338

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
             D+   PI D    I +G I ++R L     YPPV+ L S+SRL   A
Sbjct: 339 PNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSA 387


>gi|91795099|ref|YP_564750.1| F0F1 ATP synthase subunit alpha [Shewanella denitrificans OS217]
 gi|123165632|sp|Q12HP9|ATPA_SHEDO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91717101|gb|ABE57027.1| ATP synthase F1, alpha subunit [Shewanella denitrificans OS217]
          Length = 513

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 23/302 (7%)

Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
           GRV+N LG+PIDG   +     S +E+++  P  + RQ V++  +TG + +D   P+  G
Sbjct: 105 GRVLNTLGEPIDGKGPVDNDGYSPIEVIA--PGVIERQSVDEPVQTGYKTVDSMIPIGRG 162

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKK 216
           QR  V      GK+ L   ++  + +   K +   +G++   +   +   E++    L  
Sbjct: 163 QRELVIGDRQTGKTALAIDAIINQKESGIKCVYVAIGQKASTIANVVRKLEEH--GALAN 220

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VVVAT+ E+  L+ +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      
Sbjct: 221 TIVVVATASEAAALQYLAPYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRP 280

Query: 277 PVARGYPTSVFSELPRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDP 323
           P    YP  VF    RLLER              G    + G++TA+  +     + +  
Sbjct: 281 PGREAYPGDVFYLHSRLLERASRVNANYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAF 340

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           +  +V SI DG I L   L   G  P V+P  SVSR+   A +   KKL   +   + ++
Sbjct: 341 VPTNVISITDGQIFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQY 400

Query: 384 EE 385
            E
Sbjct: 401 RE 402


>gi|137466|sp|P22550|VATB_CANTR RecName: Full=V-type proton ATPase subunit B; Short=V-ATPase
           subunit B; AltName: Full=V-ATPase 57 kDa subunit;
           AltName: Full=Vacuolar proton pump subunit B
 gi|2654|emb|CAA38656.1| vacuolar ATPase subunit b [Candida tropicalis]
          Length = 511

 Score =  113 bits (282), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 159/338 (47%), Gaps = 22/338 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC 102
           + L D  V QG+  +     +R    IV +     G ++    + F     +I  S    
Sbjct: 55  LTLPDGTVRQGQVLE-----VRGTKAIVQVFEGTSGIDVKKTRVEFTGENLKIPVSEDML 109

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ +  G+PID    +   D  ++I         R   E+   TG+  ID    +  GQ
Sbjct: 110 GRIFDGSGRPIDKGPKIFAEDY-LDINGSPINPYARIYPEEMISTGVSAIDTMNSIARGQ 168

Query: 163 RIGVFAGSGIGKSTLLSMFARS--------DCFD------KVIISLVGERGREVREFIED 208
           +I +F+ SG+  + + +   R         D  D       ++ + +G      R F +D
Sbjct: 169 KIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEENFSIVFAAMGVNLETSRFFKQD 228

Query: 209 YLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266
           +  + +L+++ + +  +++  I R + P  A+T AE+ + + + +VL IL  ++ +A ++
Sbjct: 229 FEENGSLERTTLFLNLANDPTIERIITPRLALTTAEFLAYQTERHVLTILTDMSSYADAL 288

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           RE++    E+P  RGYP  ++++L  + ER G  E   G+IT V  + +  D+   PI D
Sbjct: 289 REVSAAREEVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQVPILTMPNDDITHPIPD 348

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
               I +G I ++R L   G YPP++ L S+SRL   A
Sbjct: 349 LTGYITEGQIFIDRQLHNRGIYPPINVLPSLSRLMKSA 386


>gi|257886750|ref|ZP_05666403.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,141,733]
 gi|257822804|gb|EEV49736.1| sodium-transporting two-sector ATPase [Enterococcus faecium
           1,141,733]
          Length = 593

 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 26/298 (8%)

Query: 122 GDLSMEIMSKVPPAMNRQRVEK-----GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           GD ++ ++ K P   +R   EK        TG RVID F P+  G    V    G GK+ 
Sbjct: 181 GDKNLTMLQKWPVRRSRPIKEKLNPDAPMITGQRVIDTFFPVTKGGAAAVPGPFGAGKTV 240

Query: 177 LLSMFARSDCFDKVIISLVGERGREVR-------EFIEDYLGDNLKKSVVVVATSDESPI 229
           +    A+    D V+    GERG E+        E I+   G++L +  V++A +   P+
Sbjct: 241 VQHQIAKWADVDMVVYVGCGERGNEMTDVLNEFPELIDPNTGESLMERTVLIANTSNMPV 300

Query: 230 LRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + A + T +TIAEYF   G +V ++ DS +R+A ++RE++    E+P   GYP  + S
Sbjct: 301 AAREASIYTGITIAEYFRDMGYDVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS 360

Query: 289 ELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            L    ER G      SE  +G+ITA+ +V   G + ++P+  +   ++     L+ +LA
Sbjct: 361 RLAEYYERSGRVIALGSEGREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSTLA 420

Query: 344 EEGRYPPVDPLAS-------VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI-RLIG 393
           ++  +P +D + S       V +  D    AD   +V+    ++   ++  +I RL+G
Sbjct: 421 QKRHFPSIDWIQSYSLYSTEVGKYMDHILQADWASMVTEGMRILQEEQQLNEIVRLVG 478


Searching..................................................done


Results from round 2




>gi|254780684|ref|YP_003065097.1| flagellum-specific ATP synthase [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040361|gb|ACT57157.1| flagellum-specific ATP synthase [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 438

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 438/438 (100%), Positives = 438/438 (100%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG
Sbjct: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG
Sbjct: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM
Sbjct: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT
Sbjct: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS
Sbjct: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL
Sbjct: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS
Sbjct: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420

Query: 421 PSDLSSEDVFQEITKKLQ 438
           PSDLSSEDVFQEITKKLQ
Sbjct: 421 PSDLSSEDVFQEITKKLQ 438


>gi|315121851|ref|YP_004062340.1| flagellum-specific ATP synthase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495253|gb|ADR51852.1| flagellum-specific ATP synthase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 449

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 368/438 (84%), Positives = 400/438 (91%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ  L  LAQLAE+YSK++VVQGGYI+SI  VYYTVT LS+YVCLGDFVVH+GK SDNLG
Sbjct: 1   MQNKLARLAQLAENYSKSIVVQGGYINSIMPVYYTVTGLSKYVCLGDFVVHRGKYSDNLG 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           QVIRI+ D++Y+CPVGI + I+LGDLVF  G FRISPS CWCGRV+NALGKPIDGD SL 
Sbjct: 61  QVIRIDHDVLYVCPVGIDKTITLGDLVFRQGPFRISPSECWCGRVLNALGKPIDGDFSLK 120

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G  SM+I+ K+P  MNRQRVEKGFKTGIRVIDIFTPLC+GQRIG+FAGSGIGKSTLLSM
Sbjct: 121 TGHFSMDIIGKIPSVMNRQRVEKGFKTGIRVIDIFTPLCYGQRIGIFAGSGIGKSTLLSM 180

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           FA+SDCFDKV+ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA T
Sbjct: 181 FAKSDCFDKVVISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAFT 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF SKGDNVLLILDSITRFAH+IREI+ NSGELPV RGYP SVFSELPRLLER GP 
Sbjct: 241 IAEYFCSKGDNVLLILDSITRFAHAIREISMNSGELPVTRGYPASVFSELPRLLERAGPR 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           EKEKG+ITA+ISVLVDGDNHNDPIADSVRSILDGH+VL RSLAEEGRYPPVDPLASVSRL
Sbjct: 301 EKEKGSITAIISVLVDGDNHNDPIADSVRSILDGHVVLKRSLAEEGRYPPVDPLASVSRL 360

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A KAWS+DE+KLV+SL +LIH+FEETRDIRLIGGYRPGVD+ LDKAV QVPIIYDFLKQS
Sbjct: 361 AYKAWSSDEEKLVASLKNLIHQFEETRDIRLIGGYRPGVDINLDKAVRQVPIIYDFLKQS 420

Query: 421 PSDLSSEDVFQEITKKLQ 438
           PSDL  +DVF EITKKLQ
Sbjct: 421 PSDLLLKDVFLEITKKLQ 438


>gi|325291944|ref|YP_004277808.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3]
 gi|325059797|gb|ADY63488.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3]
          Length = 468

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 275/440 (62%), Positives = 341/440 (77%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA LA  Y+     V  GG++ +I + +YTV+ LS++V LG+FV H+     +
Sbjct: 13  ISPKLAQLASLAGHYADPEFSVAPGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIH 72

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  DI Y+CP+  GE I + D V   G FR++P   WCGR INALG+PIDG   
Sbjct: 73  LGEVVRVEPDICYVCPIEPGEPIGIHDTVIRKGAFRVAPDDSWCGRTINALGEPIDGKGP 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G     I S  PP+M R+RVE  FKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 133 LASGTERRPISSNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM A++D FDKV+I LVGERGREVREFIED +G+N+ KSV VVATSDESP+LRKMAPL+A
Sbjct: 193 SMLAKADAFDKVVIGLVGERGREVREFIEDTMGENMGKSVAVVATSDESPMLRKMAPLSA 252

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAEYF  +GDNVLLI+DS+TRFAH+IRE+A  SGE PVARGYP SVF+ELPRLLER G
Sbjct: 253 VTIAEYFRDRGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAG 312

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA++S+LVDGDNHNDPIADS R ILDGHIVL+RSLAEEGRYPP++PLAS+S
Sbjct: 313 PGAEGSGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASIS 372

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  L+HRFEETRD+RLIGGYRPG D  LD AV QVPIIY+ LK
Sbjct: 373 RLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLK 432

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q P++ +++D + ++   L+
Sbjct: 433 QLPNEPAAQDAYADLATALR 452


>gi|15887903|ref|NP_353584.1| flagellum-specific ATP synthase [Agrobacterium tumefaciens str.
           C58]
 gi|6225361|sp|O34171|FLII_AGRT5 RecName: Full=Flagellum-specific ATP synthase
 gi|2459709|gb|AAB71785.1| FliI [Agrobacterium tumefaciens]
 gi|15155495|gb|AAK86369.1| flagellum-specific ATP synthase [Agrobacterium tumefaciens str.
           C58]
          Length = 473

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 275/440 (62%), Positives = 342/440 (77%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA LA  Y+     V  GG++ +I + +YTV+ LS++V LG+FV H+     +
Sbjct: 18  ISPKLAQLASLAGHYADPEFSVAHGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIH 77

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  DI Y+CP+  GE I + D V   G FR+SP   WCGR INALG+PIDG   
Sbjct: 78  LGEVVRVEPDICYVCPIEPGEPIGIHDTVIRKGAFRVSPDESWCGRTINALGEPIDGQGP 137

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G +   I +  PP+M R+RVE  FKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 138 LASGIVRRSISNNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 197

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM A++D FDKV+I+LVGERGREVREFIED +GDN+ KSV VVATSDESP+LRKMAPL+A
Sbjct: 198 SMLAKADAFDKVVIALVGERGREVREFIEDTMGDNMSKSVAVVATSDESPMLRKMAPLSA 257

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  +GDNVLLI+DS+TRFAH+IRE+A  SGE PVARGYP SVF+ELPRLLER G
Sbjct: 258 VTIAEHFRDQGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAG 317

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA++S+LVDGDNHNDPIADS R ILDGHIVL+RSLAEEGRYPP++PLAS+S
Sbjct: 318 PGAEGTGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASIS 377

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  L+HRFEETRD+RLIGGYRPG D  LD AV QVPIIY+ LK
Sbjct: 378 RLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLK 437

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q P + +++D + ++   L+
Sbjct: 438 QLPDEPAAQDAYADLATALR 457


>gi|222084860|ref|YP_002543389.1| H(+)-transporting ATP synthase [Agrobacterium radiobacter K84]
 gi|221722308|gb|ACM25464.1| H(+)-transporting ATP synthase [Agrobacterium radiobacter K84]
          Length = 462

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 277/440 (62%), Positives = 343/440 (77%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  +A LAE Y  ++N V  GG++ +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPRLPHMAALAEHYAMTENAVAHGGHVRTIAAGHYTVAGLSRHVRLGEFVAHRSATGVH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  ++ Y+CP+  GE I + D V   G FRI+PS  WCGR IN+LG+PIDG   
Sbjct: 71  LGEVVRVEPELTYVCPIEPGEPIGIHDTVIRKGAFRIAPSESWCGRTINSLGEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 LTAGTQPRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG +++KSV VVATSDESP+LRKMAPL+A
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGTHMQKSVAVVATSDESPMLRKMAPLSA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  +GDNVLLI+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 ITIAEHFRDQGDNVLLIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLASVS
Sbjct: 311 PGPEGTGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASVS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  L+HR+EETRD+RLIGGYR G D  LD AV QVPIIY+ LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKALVHRYEETRDLRLIGGYRQGADADLDIAVRQVPIIYEILK 430

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q+P +  S D F ++   L+
Sbjct: 431 QTPGERPSADAFTDLATALK 450


>gi|227820853|ref|YP_002824823.1| flagellum-specific ATP synthase [Sinorhizobium fredii NGR234]
 gi|227339852|gb|ACP24070.1| flagellum-specific ATP synthase [Sinorhizobium fredii NGR234]
          Length = 466

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 278/437 (63%), Positives = 344/437 (78%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+   V    GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDVSIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  D V +CP+  G+ I + D V   G FRI+P+  WCGR INAL +PIDG   L +
Sbjct: 74  VVRVEPDRVVVCPIEPGDPIGIHDTVIRKGAFRIAPTDNWCGRTINALAEPIDGRGPLMQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GFKTG+R +DIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDMRRSISNTAPPSMTRRRVEQGFKTGVRAVDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLAKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPP+DPLAS+SRLA
Sbjct: 314 EGTGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPIDPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYR G D  LD A+ QVP+IYD LKQ+P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRAGGDPDLDMAIKQVPVIYDVLKQTP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            + S  D F ++   L+
Sbjct: 434 GERSVADAFTDLANALK 450


>gi|222147566|ref|YP_002548523.1| flagellum-specific ATP synthase [Agrobacterium vitis S4]
 gi|221734554|gb|ACM35517.1| flagellum-specific ATP synthase [Agrobacterium vitis S4]
          Length = 464

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 263/437 (60%), Positives = 342/437 (78%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
            L+ +A +A+ Y+ +   V  GG++ +I + +YTVT LS+++ LGDFV H+     +LG+
Sbjct: 14  QLDAMAAIAKRYATSDYSVAHGGHVRTIAAGHYTVTGLSRHLHLGDFVAHRSPTGIHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  D+ Y+CP+  GE I++GD V   G FR++    WCGR +NALG PIDG   +  
Sbjct: 74  VVRVEPDLAYVCPIEPGEPIAIGDTVIRKGAFRVAAQDSWCGRTLNALGDPIDGLGPVMP 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G +   I +  P +M R+RVE GF+TG++ +DIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GLVRRSIANTAPSSMGRKRVETGFRTGVKAVDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           A++D FDKV+I+LVGERGREVREFIED LGDN+ K+V +VATSDESP+LRKMAPLTA+T+
Sbjct: 194 AKADAFDKVVIALVGERGREVREFIEDTLGDNMAKTVAIVATSDESPMLRKMAPLTAITV 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +GDNVL I DSITRFAH+IRE+AT +GE P+ARG+P SVF+ELP+LLER GP E
Sbjct: 254 AEHFRDQGDNVLFIADSITRFAHAIREVATAAGEPPIARGFPASVFTELPKLLERAGPGE 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDPIAD  R ILDGHIVL+RSLAEEGRYPP++PLAS+SRLA
Sbjct: 314 EGTGTITAIISILVDGDNHNDPIADCTRGILDGHIVLDRSLAEEGRYPPINPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD A+ QVPI+Y+ LKQ+P
Sbjct: 374 RKAWTPDQEKLVSRLKTLIHRFEETRDLRLIGGYRAGSDPDLDMAIKQVPILYEVLKQTP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
           SD +  D + ++   L+
Sbjct: 434 SDRAVVDAYADLAHALK 450


>gi|209547923|ref|YP_002279840.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533679|gb|ACI53614.1| flagellar protein export ATPase FliI [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 465

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 279/432 (64%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L E Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLAHLAGLVERYASPEFSVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  D++Y+CP+  GE I + D V   G FRISPS  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPDLIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 IAEGLDRRSISNTAPPSMTRKRVEAGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 VTIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           QSP D  S D F
Sbjct: 431 QSPGDRDSPDAF 442


>gi|116250477|ref|YP_766315.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255125|emb|CAK06199.1| putative flagellum-specific ATP synthase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 466

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 273/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  L+ L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLAHLSDLVDRYASPEFAVAHGGRVQTIAAGHYTVHGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRISP+  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPTDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 ITEGLDRRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 VTIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+R+IGGYR G D  LD A+ QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRMIGGYRQGADPDLDMAIKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           QSP D  S D F
Sbjct: 431 QSPGDRDSLDAF 442


>gi|241203101|ref|YP_002974197.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240856991|gb|ACS54658.1| ATPase, FliI/YscN family [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 466

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 273/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLAHLAGLVDRYASPEFAVAHGGRVQTIAAGHYTVHGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRI+P+  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRIAPTDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 IAEGLDRRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 VTIAEHFRDKGENVLFIIDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+R+IGGYR G D  LD A+ QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRMIGGYRQGADPDLDMAIKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           QSP D  S D F
Sbjct: 431 QSPGDRDSLDAF 442


>gi|190890358|ref|YP_001976900.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CIAT 652]
 gi|190695637|gb|ACE89722.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CIAT 652]
          Length = 464

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 275/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+  +  +
Sbjct: 10  LSPTLAHLAGLVDQYASPDFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSASGVH 69

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRISPS  WCGR +N+L +PIDG   
Sbjct: 70  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGQGP 129

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M RQRV  GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 130 IVEGLDRRSISNTAPPSMTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 189

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 190 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 249

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 250 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 309

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 310 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 370 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 429

Query: 419 QSPSDLSSEDVF 430
           Q+P D  S D F
Sbjct: 430 QAPGDRESVDAF 441


>gi|86356307|ref|YP_468199.1| flagellum-specific ATP synthase [Rhizobium etli CFN 42]
 gi|86280409|gb|ABC89472.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CFN 42]
          Length = 465

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 275/432 (63%), Positives = 333/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+     +
Sbjct: 11  LSPKLVHLAGLVDRYASPEFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSATGIH 70

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  D++Y+CP+  GE I + D V   G FRISPS  WCGR +N+L +PIDG   
Sbjct: 71  LGEVVRVEPDLIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGLGP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +  G     I +  PP+M RQRV  GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 131 IAAGLDRRSISNTAPPSMTRQRVATGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG ++KK++ VVATSDESP+LRKMAPLTA
Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSDMKKAIAVVATSDESPMLRKMAPLTA 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 251 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 430

Query: 419 QSPSDLSSEDVF 430
           Q+P D  S D F
Sbjct: 431 QAPGDRESVDAF 442


>gi|327193032|gb|EGE59944.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Rhizobium etli CNPAF512]
          Length = 464

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 276/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%)

Query: 1   MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA L + Y+     V  GG + +I + +YTV  LS++V LG+FV H+  +  +
Sbjct: 10  LSPTLAHLAGLVDQYASPDFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSASGVH 69

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  +++Y+CP+  GE I + D V   G FRISPS  WCGR IN+L +PIDG   
Sbjct: 70  LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTINSLCEPIDGQGP 129

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     I +  PP+M RQRV  GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 130 IVEGLDRRSISNTAPPSMTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 189

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA
Sbjct: 190 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 249

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G
Sbjct: 250 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 309

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S
Sbjct: 310 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 369

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  LIHRFEETRD+RLIGGYR G D  LD AV QVPIIYD LK
Sbjct: 370 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 429

Query: 419 QSPSDLSSEDVF 430
           Q+P D  S D F
Sbjct: 430 QAPGDRESVDAF 441


>gi|15964410|ref|NP_384763.1| flagellum-specific ATP synthase [Sinorhizobium meliloti 1021]
 gi|307311552|ref|ZP_07591193.1| ATPase, FliI/YscN family [Sinorhizobium meliloti BL225C]
 gi|17380374|sp|O54249|FLII_RHIME RecName: Full=Flagellum-specific ATP synthase
 gi|15073587|emb|CAC45229.1| Flagellum-specific ATP synthase [Sinorhizobium meliloti 1021]
 gi|306899569|gb|EFN30198.1| ATPase, FliI/YscN family [Sinorhizobium meliloti BL225C]
          Length = 467

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 276/437 (63%), Positives = 346/437 (79%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  + V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PIDG  +L +
Sbjct: 74  VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLSKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA
Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD LKQ P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            +  + D F ++   L+
Sbjct: 434 GERPAFDAFTDLANALK 450


>gi|2916791|emb|CAA11957.1| flagellar export apparatus protein [Sinorhizobium meliloti]
          Length = 467

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 276/437 (63%), Positives = 346/437 (79%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  + V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PIDG  +L +
Sbjct: 74  VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLSKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA
Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD LKQ P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            +  + D F ++   L+
Sbjct: 434 GERPAFDAFTDLANALK 450


>gi|307318907|ref|ZP_07598338.1| ATPase, FliI/YscN family [Sinorhizobium meliloti AK83]
 gi|306895321|gb|EFN26076.1| ATPase, FliI/YscN family [Sinorhizobium meliloti AK83]
          Length = 467

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 275/437 (62%), Positives = 345/437 (78%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L  LA L E Y+     +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+
Sbjct: 14  SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGE 73

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+R+  + V +CP+  G+ I + D+V   G FRI+P+  WCGR INAL +PIDG  +L +
Sbjct: 74  VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD+   I +  PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           AR+D FDKV+I+LVGERGREVREFIED LG NL KSV VVATSDESP+LRKMAPLTAVTI
Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGANLSKSVAVVATSDESPMLRKMAPLTAVTI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE++  KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  
Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA
Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAW+ D++KLV+ L  LIHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD LKQ P
Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433

Query: 422 SDLSSEDVFQEITKKLQ 438
            +  + D F ++   L+
Sbjct: 434 GERPAFDAFTDLANALK 450


>gi|146296283|ref|YP_001180054.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409859|gb|ABP66863.1| type III secretion system ATPase, FliI/YscN [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 431

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 253/437 (57%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             E L    E  S N     G+++ +     T+  +   V +G     +   S+ L +V+
Sbjct: 1   MFERLKTKIE--STNFYQFTGFVNQVIG--LTIESIGPAVSIGTLCKIKTAKSETLAEVV 56

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
               + V + P      I  G  V        +       GR+++ LG+PIDG   + K 
Sbjct: 57  GFKENKVLLMPYSDLVGIFPGCKVIAQDSIFEVKVGEELLGRILDGLGQPIDGKGEI-KS 115

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +   + ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M A
Sbjct: 116 KIKYPVENRAPNPLERPRIDSVMPLGIKAIDALITIGKGQRVGIFAGSGVGKSTLLGMIA 175

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +++L+GERGRE++EF+ +D   + LK+SVV+VATSDES + R  A   A+ I
Sbjct: 176 RNAKADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVIVATSDESALKRVKAAYVAMAI 235

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G ++
Sbjct: 236 AEYFRDQGMDVLFMMDSLTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAGKNQ 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+ITA+ +VLVDGD+ N+PI D+ R ILDGHIVL+RS+A +  YP +D LAS+SR+ 
Sbjct: 296 K--GSITALYTVLVDGDDFNEPITDTARGILDGHIVLSRSIANKNHYPAIDVLASISRVM 353

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +   S + K++ +    ++  ++E  D+  IG Y  G +  +D+A+  +P I +FL+Q  
Sbjct: 354 NDIVSPEHKEVANETKRILATYKEAEDLITIGAYTKGTNSEIDRAIDLMPRINEFLRQDV 413

Query: 422 SDLSSEDVFQEITKKLQ 438
            +      F++  + L+
Sbjct: 414 DESFE---FEQELEMLK 427


>gi|20807886|ref|NP_623057.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Thermoanaerobacter tengcongensis MB4]
 gi|254478883|ref|ZP_05092247.1| flagellar protein export ATPase FliI [Carboxydibrachium pacificum
           DSM 12653]
 gi|20516451|gb|AAM24661.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Thermoanaerobacter tengcongensis MB4]
 gi|214035196|gb|EEB75906.1| flagellar protein export ATPase FliI [Carboxydibrachium pacificum
           DSM 12653]
          Length = 437

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 174/425 (40%), Positives = 255/425 (60%), Gaps = 8/425 (1%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIRINLDIVYIC 73
             K LV   G +S +     T+  +     +G+    +    ++ L +V+    + VY+ 
Sbjct: 14  REKRLVGYYGKVSQVIG--LTIESVGPLSNIGEICYIKTIDGNEVLAEVVGFKEEKVYLM 71

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G  E I  G  V   G+  +++      GRV++ LG PIDG   L K + S+ + +  
Sbjct: 72  PLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKGPL-KYEKSIPVNNTP 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  +I
Sbjct: 131 PDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMMARNAKADLNVI 190

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EFI +D   + LK+SVVVVATSD   ++R    +TA  IAEYF  +G +
Sbjct: 191 ALIGERGREVNEFIEKDLGEEGLKRSVVVVATSDTPALVRVKGAMTATAIAEYFRDQGLD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DSITRFA + REI  + GE PV+RGY  SVFS LP+LLER G    +KG+ITA+ 
Sbjct: 251 VLLMMDSITRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERSG--SSQKGSITALY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LASVSR+ +   + + K+
Sbjct: 309 TVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVSRVINDIITDEHKE 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           LV+   +++  + E  D+  IG Y  G +  +D+A+     +  FL+Q   +    +  +
Sbjct: 369 LVAKFKNILATYAEAEDLINIGAYNFGTNPKIDEAIELNEKMNSFLRQKIDEAYDFETTK 428

Query: 432 EITKK 436
           ++  K
Sbjct: 429 KLLAK 433


>gi|150395480|ref|YP_001325947.1| flagellum-specific ATP synthase [Sinorhizobium medicae WSM419]
 gi|150026995|gb|ABR59112.1| ATPase, FliI/YscN family [Sinorhizobium medicae WSM419]
          Length = 467

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 266/419 (63%), Positives = 333/419 (79%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  GG++ +I+  +YTV+ LS++V LGDFV H+     +LG+V+R+  + V +CP+  G+
Sbjct: 32  IAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGEVVRVEPERVVVCPIEPGD 91

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
            I + D+V   G FRI+P+  WCGR INAL +PID    L +GD+   I +  PP+M R+
Sbjct: 92  PIGIHDIVIRKGAFRIAPTDKWCGRTINALAEPIDSLGVLLQGDVRRSIANVAPPSMTRK 151

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM AR+D FDKV+I+LVGERG
Sbjct: 152 RVEHGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFDKVVIALVGERG 211

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REVREFIED LG NL KSV VVATSDESP+LRKMAPLTAVTIAE++  +GDNVLLI+DS+
Sbjct: 212 REVREFIEDTLGSNLSKSVAVVATSDESPMLRKMAPLTAVTIAEHYRDQGDNVLLIVDSV 271

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP  +  G ITA+IS+LVDGDN
Sbjct: 272 TRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGAEGTGTITAIISILVDGDN 331

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HNDP+ADS R ILDGHIVL RSLAEEGRYPPV+PL+S+SRLA KAW+ D++KLV+ L  L
Sbjct: 332 HNDPVADSARGILDGHIVLERSLAEEGRYPPVNPLSSISRLARKAWTPDQEKLVARLKSL 391

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           IHRFEETRD+RLIGGYRPG D  LD A+ QVP+IYD L Q+P +  + D F ++   L+
Sbjct: 392 IHRFEETRDLRLIGGYRPGGDADLDMAIRQVPVIYDVLMQTPGERPAFDAFTDLANALK 450


>gi|163758010|ref|ZP_02165098.1| flagellum-specific ATP synthase [Hoeflea phototrophica DFL-43]
 gi|162284299|gb|EDQ34582.1| flagellum-specific ATP synthase [Hoeflea phototrophica DFL-43]
          Length = 459

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 240/417 (57%), Positives = 314/417 (75%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
             G ++ ++  +  V  LS++V +GDF+  +  +   L +V+ +  D +  CPV    + 
Sbjct: 26  VSGIVTEVSPGHCVVAGLSRHVRIGDFISFRHDDGVKLAEVVSLGPDQLIACPVDGAAQA 85

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           ++G+ V+  G FR+SP   WCGR INALG+P+DG   L  G +S  +    P +M RQRV
Sbjct: 86  AIGERVWRQGAFRLSPHHTWCGRTINALGEPVDGLGGLEHGTVSRPVTGAPPASMLRQRV 145

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
               +TGIRV+D+FTP+C GQR+G+FAGSG+GKSTLLSMFA++  FD+ +I+LVGERGRE
Sbjct: 146 NAPLRTGIRVVDVFTPICRGQRLGIFAGSGVGKSTLLSMFAKAADFDRAVIALVGERGRE 205

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VREFIED LG+N+KK+V VVATSDESP+LRK+APLTAVT+AE+F  +G+NVLLI+DS+TR
Sbjct: 206 VREFIEDTLGENMKKTVAVVATSDESPMLRKLAPLTAVTVAEHFRDQGENVLLIVDSLTR 265

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FAH++REI   +GE PVARGYP SVF+ LP LLER GP  K  G ITA++S+LVDGDNHN
Sbjct: 266 FAHALREIGMAAGEPPVARGYPASVFTALPGLLERAGPGPKGAGAITAIVSILVDGDNHN 325

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DP+ADS R ILDGH+VL+R+LA+EGRYPPV+PL S+SRLA KAW  DE+KLV  L  LIH
Sbjct: 326 DPVADSARGILDGHLVLDRALADEGRYPPVNPLTSISRLARKAWRGDEEKLVMRLKALIH 385

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           R+EETRD+RLIGGYRPG D  LD A+ Q P+IYD L+Q+P    S D F E+ + ++
Sbjct: 386 RYEETRDLRLIGGYRPGTDAELDMAIKQAPVIYDSLRQNPDQPPSADAFAELAEAMK 442


>gi|182679723|ref|YP_001833869.1| flagellum-specific ATP synthase [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635606|gb|ACB96380.1| ATPase, FliI/YscN family [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 442

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 223/436 (51%), Positives = 306/436 (70%), Gaps = 2/436 (0%)

Query: 5   LETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           L+ L Q  ++      LV  GG ++ +T  + +V  LS ++ LGD +      S  LG+V
Sbjct: 4   LDRLGQKLDNARRDIKLVRIGGTVTEVTPAFISVAGLSSFIKLGDCIKFGEDGSSALGEV 63

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +RI+     I        I LGD  +  G F+I P   W GRVINALG PIDG D+L  G
Sbjct: 64  VRIDQQNATIKIFDHASSIGLGDKAWRMGPFQICPDPSWKGRVINALGIPIDGGDALRLG 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           + S  I +  PPAM R RV K  +TG+RVID+FTPLC GQRIG+FAGSG+GKSTLL M A
Sbjct: 124 EESQSIHAAPPPAMRRARVTKPMRTGVRVIDLFTPLCAGQRIGIFAGSGVGKSTLLGMLA 183

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
            S  FD V+I LVGERGREVREF+++ L D+L  +V +VAT DES ++R++AP TA+TIA
Sbjct: 184 GSREFDTVVIGLVGERGREVREFLDEVLADHLANAVTIVATGDESSLMRRLAPNTAMTIA 243

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +G+NVLLI+DS+TRFAH+ R++A  +GE+ VARGY  SVF++LP+LLER GP   
Sbjct: 244 EFFRDRGENVLLIVDSVTRFAHAARDVALAAGEMAVARGYAPSVFTDLPKLLERAGPGLD 303

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT + SVLVDGD+HN+PIAD++R  LDGHIVL+R++A++GR+P V+ L S+SRLA 
Sbjct: 304 GSGSITGIFSVLVDGDDHNEPIADTIRGTLDGHIVLDRAIADQGRFPAVNILRSISRLAQ 363

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             W+ +++ LV  +  LI R+E+TRD+RL+GGY+PG D  LD+A+  VP IY  ++Q+P 
Sbjct: 364 HVWTPEQQGLVLKIRGLIARYEDTRDLRLMGGYQPGSDGELDQAIALVPKIYQAMEQTPK 423

Query: 423 DLSSEDVFQEITKKLQ 438
             +S+D F+E+ + LQ
Sbjct: 424 SPASQDAFRELAEILQ 439


>gi|307264870|ref|ZP_07546432.1| flagellar protein export ATPase FliI [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|326389480|ref|ZP_08211047.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus JW 200]
 gi|306920128|gb|EFN50340.1| flagellar protein export ATPase FliI [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|325994485|gb|EGD52910.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus JW 200]
          Length = 436

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 175/437 (40%), Positives = 259/437 (59%), Gaps = 10/437 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-L 59
           M   L+   ++ +   K L+   G +S +     T+        +G+    +  N +  L
Sbjct: 1   MSNMLDKYKKVLQ--EKRLIQYYGKVSQVIG--LTIESTGPLSNIGEICNIKTINGNTIL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + VY+ P+G  E I  G  V   G+  RI+      GRV++ LG PIDG   
Sbjct: 57  AEVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRINVGNELLGRVLDGLGNPIDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K + S+ I +  P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL
Sbjct: 117 I-KFEKSIPINNVPPDPLERKRIREVIPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREV EF+ +D   + LKKSVVVVATSD   ++R    +T
Sbjct: 176 GMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMT 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +VLL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER 
Sbjct: 236 ATAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LASV
Sbjct: 296 GCSKK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASV 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+ +   + + K+L++    ++  + E  D+  IG Y  G +  +D+A+     +  FL
Sbjct: 354 SRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNEKMNSFL 413

Query: 418 KQSPSDLSSEDVFQEIT 434
           +Q   +    +  +++ 
Sbjct: 414 RQRIDESYDFETTKQLL 430


>gi|312126822|ref|YP_003991696.1| atpase, flii/yscn family [Caldicellulosiruptor hydrothermalis 108]
 gi|311776841|gb|ADQ06327.1| ATPase, FliI/YscN family [Caldicellulosiruptor hydrothermalis 108]
          Length = 431

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 160/436 (36%), Positives = 249/436 (57%), Gaps = 9/436 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            +E L    E+   N     G+++ +     T+      V +G     +   ++ L +V+
Sbjct: 1   MIEKLKSKIEN--ANFYQFTGFVNQVIG--LTIESQGPAVSIGTLCRIKAAKTETLAEVV 56

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
               + V + P      +  G  V        +       GR+++ LG+PIDG   + K 
Sbjct: 57  GFKENKVLLMPYSDLVGVFPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KS 115

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +   + ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M A
Sbjct: 116 KIKYPVENRAPNPLERPRIDTIMPLGIKAIDALLTIGKGQRVGIFAGSGVGKSTLLGMIA 175

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +++L+GERGRE++EF+ +D   + LK+SVVVVATSDES + R  A   A+ I
Sbjct: 176 RNAKADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAI 235

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G ++
Sbjct: 236 AEYFRDQGLDVLFLMDSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSVMPKLLERAGKNK 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+ITA+ +VLVDGD+ N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ 
Sbjct: 296 --RGSITALFTVLVDGDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVM 353

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +       ++L +    ++  + ET D+  IG Y  G +  +D+A+  VP I  FL+Q  
Sbjct: 354 NDIVEPSHRELANETKRVLAVYRETEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQEV 413

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+ K +
Sbjct: 414 DERFDFEEEIEMLKAI 429


>gi|110632661|ref|YP_672869.1| flagellum-specific ATP synthase [Mesorhizobium sp. BNC1]
 gi|110283645|gb|ABG61704.1| ATPase, FliI/YscN family [Chelativorans sp. BNC1]
          Length = 465

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 231/424 (54%), Positives = 308/424 (72%), Gaps = 2/424 (0%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           + +V  GG IS +T +YY V  LS+   LG  + ++   S+  G+V+RI+ D V + P  
Sbjct: 34  QRMVRHGGRISEVTPMYYRVRGLSKTARLGQIISYRSHGSEYRGEVVRISEDDVIVAPFE 93

Query: 77  IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPA 135
              E SLG  VF  G   I P A W GRVI+AL + +D   +L +        M + P A
Sbjct: 94  HSAEASLGQAVFATGTLEIRPHASWRGRVIDALARALDDGPALIRSAPQGPAAMPRTPAA 153

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQRV + F TG+RV+D+F PLC GQRIG+FAGSG+GKSTLL+M AR++ FD V++++V
Sbjct: 154 LRRQRVAEPFLTGVRVVDLFAPLCLGQRIGIFAGSGVGKSTLLAMLARAEAFDTVVVAMV 213

Query: 196 GERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+ED LG+  +KK+V VVATSDES ++R+ A  TA+ +AE+F   G+ VLL
Sbjct: 214 GERGREVREFLEDTLGEAGMKKTVAVVATSDESAMMRRRAADTAMRVAEHFRDAGEKVLL 273

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           +LDSITR+AH+ RE+AT +GE PVARGYP SVF++LPRLLER GP E   G+ITAV SVL
Sbjct: 274 LLDSITRYAHATREVATGAGEPPVARGYPASVFTDLPRLLERAGPGETGHGSITAVFSVL 333

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+HNDP+AD VR ILDGH+VL+R++AE+GR+P V PLAS+SRLAD++W+ D K++V 
Sbjct: 334 VDGDDHNDPVADCVRGILDGHLVLDRAIAEQGRFPAVSPLASISRLADRSWTDDRKRVVQ 393

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L  +I RFEETRDIRL+GG++ G+D  LD AV QVP+IYD L+QSP D  + D F ++ 
Sbjct: 394 RLKAMIARFEETRDIRLLGGFQAGLDPELDLAVRQVPLIYDILRQSPKDPPAMDPFADLA 453

Query: 435 KKLQ 438
             L+
Sbjct: 454 AHLK 457


>gi|222530136|ref|YP_002574018.1| FliI/YscN family ATPase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456983|gb|ACM61245.1| ATPase, FliI/YscN family [Caldicellulosiruptor bescii DSM 6725]
          Length = 431

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 159/436 (36%), Positives = 248/436 (56%), Gaps = 9/436 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            +E L    E+   N     G+++ +     T+      V +G     +   ++ L +V+
Sbjct: 1   MIEKLKSKIEN--TNFYQFTGFVNQVIG--LTIESQGPAVSIGTLCRIKAAKTETLAEVV 56

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
               + V + P      +  G  V        +       GR+++ LG+PIDG   + K 
Sbjct: 57  GFKENKVLLMPYSDLVGVFPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KS 115

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +   + ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M A
Sbjct: 116 KIKYPVENRAPNPLERPRIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIA 175

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +++L+GERGRE++EF+ +D   + LK+SVVVVATSDES + R  A   A+ I
Sbjct: 176 RNAKADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAI 235

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G ++
Sbjct: 236 AEYFRDQGLDVLFLMDSLTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAGKNQ 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+ITA+ +VLVDGD+ N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ 
Sbjct: 296 K--GSITALFTVLVDGDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVM 353

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +       ++L +    ++  + E  D+  IG Y  G +  +D+A+  VP I  FL+Q  
Sbjct: 354 NDIVEPSHRELANETKRVLAVYREAEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQDV 413

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   ++ K +
Sbjct: 414 DERFEFEEEIDMLKAI 429


>gi|167037666|ref|YP_001665244.1| flagellar protein export ATPase FliI [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040327|ref|YP_001663312.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X514]
 gi|166854567|gb|ABY92976.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X514]
 gi|166856500|gb|ABY94908.1| flagellar protein export ATPase FliI [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
          Length = 437

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 172/422 (40%), Positives = 254/422 (60%), Gaps = 8/422 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICP 74
            K L+   G +S +     T+        +G+    +  N +  L +V+    + VY+ P
Sbjct: 15  EKRLIQYYGKVSQVIG--LTIESTGPLSNIGEICNIKTINGNTILAEVVGFKEEKVYLMP 72

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I  G  V   G+  R++      GRV++ LG PIDG   + K + S+ I +  P
Sbjct: 73  LGNMEGIGAGSKVIATGQTLRVNVGNELLGRVLDGLGNPIDGKGPI-KFEKSIPINNVPP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  +I+
Sbjct: 132 DPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMMARNAKADLNVIA 191

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EF+ +D   + LKKSVVVVATSD   ++R    +TA  IAEYF  +G +V
Sbjct: 192 LIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMTATAIAEYFRDQGLDV 251

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER G S+K  G+ITA+ +
Sbjct: 252 LLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERSGCSKK--GSITALYT 309

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LASVSR+ +   + + K+L
Sbjct: 310 VLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVSRVINDIITEEHKEL 369

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           ++    ++  + E  D+  IG Y  G +  +D+A+     + +FL+Q   +    +  ++
Sbjct: 370 IARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNFLRQRIDESYDFETTKQ 429

Query: 433 IT 434
           + 
Sbjct: 430 LL 431


>gi|256750743|ref|ZP_05491628.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914411|ref|ZP_07131727.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X561]
 gi|307724353|ref|YP_003904104.1| ATPase, FliI/YscN family [Thermoanaerobacter sp. X513]
 gi|320116081|ref|YP_004186240.1| FliI/YscN family ATPase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|256750326|gb|EEU63345.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889346|gb|EFK84492.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X561]
 gi|307581414|gb|ADN54813.1| ATPase, FliI/YscN family [Thermoanaerobacter sp. X513]
 gi|319929172|gb|ADV79857.1| ATPase, FliI/YscN family [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 432

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 172/422 (40%), Positives = 254/422 (60%), Gaps = 8/422 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICP 74
            K L+   G +S +     T+        +G+    +  N +  L +V+    + VY+ P
Sbjct: 10  EKRLIQYYGKVSQVIG--LTIESTGPLSNIGEICNIKTINGNTILAEVVGFKEEKVYLMP 67

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I  G  V   G+  R++      GRV++ LG PIDG   + K + S+ I +  P
Sbjct: 68  LGNMEGIGAGSKVIATGQTLRVNVGNELLGRVLDGLGNPIDGKGPI-KFEKSIPINNVPP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  +I+
Sbjct: 127 DPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMMARNAKADLNVIA 186

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EF+ +D   + LKKSVVVVATSD   ++R    +TA  IAEYF  +G +V
Sbjct: 187 LIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMTATAIAEYFRDQGLDV 246

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER G S+K  G+ITA+ +
Sbjct: 247 LLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERSGCSKK--GSITALYT 304

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LASVSR+ +   + + K+L
Sbjct: 305 VLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVSRVINDIITEEHKEL 364

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           ++    ++  + E  D+  IG Y  G +  +D+A+     + +FL+Q   +    +  ++
Sbjct: 365 IARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNFLRQRIDESYDFETTKQ 424

Query: 433 IT 434
           + 
Sbjct: 425 LL 426


>gi|312135851|ref|YP_004003189.1| atpase, flii/yscn family [Caldicellulosiruptor owensensis OL]
 gi|311775902|gb|ADQ05389.1| ATPase, FliI/YscN family [Caldicellulosiruptor owensensis OL]
          Length = 434

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 162/440 (36%), Positives = 248/440 (56%), Gaps = 12/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M   LE L    E+   N     G+++ +     T+      V +G     +   ++ L 
Sbjct: 1   MIDMLEKLKSKVEN--ANFYQFTGFVNQVIG--LTIESQGPAVSIGTLCRIKAAKTETLA 56

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V + P      +  G  V        I       GR+++ LG+PIDG   +
Sbjct: 57  EVVGFKENKVLLMPYSDLVGVFPGCKVIAQDSIFEIKVGNELLGRILDGLGQPIDGKGEI 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K  +   + ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL 
Sbjct: 117 -KSKIKYPVENRAPNPLERPRIDTIMPLGIKAIDALLTIGRGQRVGIFAGSGVGKSTLLG 175

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +++L+GERGRE++EF+ +D   + LK+SVVVVATSDES + R  A   A
Sbjct: 176 MIARNAKADVNVLALIGERGRELKEFLEKDLKDEGLKRSVVVVATSDESALKRVKAAYVA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + IAEYF  +G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G
Sbjct: 236 MAIAEYFRDQGLDVLFLMDSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSIMPKLLERAG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +    G+ITA+ +VLVDGD+ N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+S
Sbjct: 296 KNRN--GSITALFTVLVDGDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASIS 353

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +       ++L +    ++  + E  D+  IG Y  G +  +D+A+  +P I  FL+
Sbjct: 354 RVMNDIVEPFHRELANQTKRILAVYREAEDLINIGAYTKGSNPEIDRAIDLMPRINQFLR 413

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q   +      F+E  + L+
Sbjct: 414 QEVDEKFE---FEETIQMLK 430


>gi|158422270|ref|YP_001523562.1| flagellum-specific ATP synthase [Azorhizobium caulinodans ORS 571]
 gi|158329159|dbj|BAF86644.1| flagellum-specific ATP synthase [Azorhizobium caulinodans ORS 571]
          Length = 440

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 214/418 (51%), Positives = 296/418 (70%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
             GG +  +T  Y+ V+ +S Y+ LGD V         +G+V+R++     + P      
Sbjct: 22  RVGGIVREVTPTYFRVSGISSYLRLGDRVGIDQDGRTRIGEVVRVDEAGAAVKPFDERVP 81

Query: 81  ISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + +G + F  G   +SP   W GRVINALG P+DG+  L +G+  M + ++ PPAM RQR
Sbjct: 82  VGMGSVAFRAGSLSLSPDRSWKGRVINALGVPLDGEGLLARGEHRMPMDAEPPPAMTRQR 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           ++KG +TG+RVID+FTPLC GQR+G+FAGSG+GKSTLL+M ARS  FD V++ LVGERGR
Sbjct: 142 IQKGIRTGVRVIDLFTPLCEGQRMGIFAGSGVGKSTLLAMLARSAVFDTVVVGLVGERGR 201

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EVREF+E  L  N  +SVVVV+TSDESP++R++AP +A+ +AEYF   G++VLLI+DS+T
Sbjct: 202 EVREFLEGPLASNRHRSVVVVSTSDESPMMRRLAPQSALAVAEYFRDLGESVLLIIDSVT 261

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+AH+ R++A  +GE  VARGY  SVFS LP+LLER GP  +  G ITAV SVLVDGD+H
Sbjct: 262 RYAHAARDVALAAGEPAVARGYAPSVFSTLPKLLERAGPGTEGAGCITAVFSVLVDGDDH 321

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDP+AD++R  LDGHIVL+R++A++GR+P V+ L S+SRLAD  W+ +E+ LV  L  ++
Sbjct: 322 NDPVADAIRGTLDGHIVLDRAIADQGRFPAVNVLGSISRLADHVWTPEERDLVRRLKSMV 381

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            RFE+TRD+RL+GGY  G D  LD+AV  VP IY+ L+Q      S D F E+ + ++
Sbjct: 382 ARFEDTRDLRLMGGYHAGSDPELDQAVALVPKIYEALRQYSDSPPSLDPFGELAQAIR 439


>gi|328545465|ref|YP_004305574.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [polymorphum gilvum SL003B-26A1]
 gi|326415206|gb|ADZ72269.1| H(+)-transporting ATP synthase, flagellum-specific protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 440

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 220/431 (51%), Positives = 290/431 (67%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            LA        + V  GG ++ +T     +  LS+ VCLGD VV  GK  +   ++IR++
Sbjct: 8   ALAVAGARKEVDPVRIGGRVTQVTPGSVRICGLSRSVCLGDLVVLSGKGGERRSEIIRLD 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              V + P     +I++G   F  G   I P   W GRVI+ALG P D    L  G  +M
Sbjct: 68  EQDVLVKPFDSHVDIAIGARAFRKGSLTIHPHESWKGRVIDALGHPADDRGVLRPGPAAM 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                 P  + R R+ K  +TG+RVID+FTPLC GQRIG+FAGSG+GKSTLL+M A S  
Sbjct: 128 LPDCDPPATLERARIRKPVRTGVRVIDLFTPLCVGQRIGIFAGSGVGKSTLLAMLAGSGD 187

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           FD V++ LVGERGREVREF+ED LG+  ++SVVVVAT +ES ++R++AP TA+ +AEYF 
Sbjct: 188 FDTVVVGLVGERGREVREFVEDVLGEARERSVVVVATGNESAMMRRLAPKTAMGVAEYFR 247

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G +VLLI+DS TRFAH+ R++A  +GE PVARGY  SVFS+L RLLER GP  + KG 
Sbjct: 248 DLGQSVLLIIDSATRFAHAARDVAMAAGEPPVARGYTPSVFSDLTRLLERAGPGGEGKGA 307

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + SVLVDGD+HNDP+AD++R +LDGHIVL+RS+A+ GRYP VD L SVSRL+  AWS
Sbjct: 308 ITGIFSVLVDGDDHNDPVADTLRGVLDGHIVLDRSIADAGRYPAVDVLKSVSRLSQHAWS 367

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           A+E++L+  L  +I RFE+TRD+RL+GGY+PG D  LDKA   VP IY+ L+Q       
Sbjct: 368 AEERELILRLKAMISRFEDTRDLRLMGGYQPGSDPALDKACTLVPRIYEALRQDARSAQV 427

Query: 427 EDVFQEITKKL 437
            D F ++ + L
Sbjct: 428 GDPFADLARAL 438


>gi|312621571|ref|YP_004023184.1| atpase, flii/yscn family [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202038|gb|ADQ45365.1| ATPase, FliI/YscN family [Caldicellulosiruptor kronotskyensis 2002]
          Length = 431

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 159/436 (36%), Positives = 247/436 (56%), Gaps = 9/436 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            +E L    E+   N     G+++ +     T+      V +G     +   ++ L +V+
Sbjct: 1   MIEKLKSKIEN--ANFYQFTGFVNQVIG--LTIESQGPAVSIGTLCRIKAAKTETLAEVV 56

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
               + V + P      +  G  V        +       GR+++ LG+PIDG   + K 
Sbjct: 57  GFKENKVLLMPYSDLVGVFPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KS 115

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +   + ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M A
Sbjct: 116 KIKYPVENRAPNPLERPRIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIA 175

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +++L+GERGRE++EF+ +D   + LK+SVVVVATSDES + R  A   A+ I
Sbjct: 176 RNAKADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAI 235

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G ++
Sbjct: 236 AEYFRDQGLDVLFLMDSLTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAGKNQ 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+ITA+ +VLVDGD+ N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ 
Sbjct: 296 K--GSITALFTVLVDGDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVM 353

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +       + L +    ++  + E  D+  IG Y  G +  +D+A+  VP I  FL+Q  
Sbjct: 354 NDIVEPFHRDLANETKRVLAVYREAEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQDV 413

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   ++ K +
Sbjct: 414 DERFEFEEEIDMLKAI 429


>gi|289578431|ref|YP_003477058.1| flagellar protein export ATPase FliI [Thermoanaerobacter italicus
           Ab9]
 gi|297544707|ref|YP_003677009.1| flagellar protein export ATPase FliI [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528144|gb|ADD02496.1| flagellar protein export ATPase FliI [Thermoanaerobacter italicus
           Ab9]
 gi|296842482|gb|ADH60998.1| flagellar protein export ATPase FliI [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 437

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 170/422 (40%), Positives = 253/422 (59%), Gaps = 8/422 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
            K L+   G +S +     T+        +G+    +  N + +  +V+    + VY+ P
Sbjct: 15  EKRLIQYYGKVSQVIG--LTIESTGPLSNIGEICNIKTTNGNIISAEVVGFKEEKVYLMP 72

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I  G  V   G+  R+S      GR+++ LG PID    + K + S+ I +  P
Sbjct: 73  LGNMEGIGAGSKVIATGQTLRVSVGKELLGRILDGLGNPIDSKGPV-KFEKSIPINNVPP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  +I+
Sbjct: 132 DPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMMARNAKADLNVIA 191

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EF+ +D   + LKKSVVVVATSD   ++R    +TA  IAEYF  +G +V
Sbjct: 192 LIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMTATAIAEYFRDQGLDV 251

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + RE+  + GE PV+RGY  SVFS LP+LLER G S+K  G+ITA+ +
Sbjct: 252 LLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERSGCSKK--GSITALYT 309

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D LASVSR+ +   + + K+L
Sbjct: 310 VLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVSRVMNDIITEEHKEL 369

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           ++    ++  + E  D+  IG Y  G +  +D+A+     + +FL+Q   +    +  ++
Sbjct: 370 IARFKDILASYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNFLRQRIDESYDFETTKQ 429

Query: 433 IT 434
           + 
Sbjct: 430 LL 431


>gi|319781686|ref|YP_004141162.1| ATPase, FliI/YscN family [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167574|gb|ADV11112.1| ATPase, FliI/YscN family [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 467

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 230/423 (54%), Positives = 309/423 (73%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           ++ L+ +GG +  +T  +Y V  LS +  LGD V   G      G++++I  D   + P 
Sbjct: 36  AEALLKRGGRVIEVTPTHYKVHGLSSFARLGDIVEQPGHAGARRGEIVKIGRDEAVVAPF 95

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  +GD VF  G   ++P A W GR I+AL + IDG   L +GD +       P A
Sbjct: 96  ERSADSGIGDAVFRRGPLVVAPHASWRGRTIDALTRAIDGGPPLARGDDTSRGAQTTPGA 155

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M RQRV   F TG++VIDIFTPLC GQR+G+FAGSG+GKSTLL+M A +D FD V+++L+
Sbjct: 156 MARQRVGTAFMTGVKVIDIFTPLCFGQRLGIFAGSGVGKSTLLAMLAGADAFDTVVVALI 215

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGREVREF+ED +GD++ K++ VVATSDES ++R+ AP TA+ +AE+F  +G  VLL+
Sbjct: 216 GERGREVREFLEDTIGDSMAKTIAVVATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLV 275

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           LDSITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP  + KG+ITA+ISVLV
Sbjct: 276 LDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGTEGKGSITAIISVLV 335

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA KAWS +++ LV+ 
Sbjct: 336 DGDDHNDPVADSVRGILDGHVVLDRTIAEQGRYPPVNPLSSISRLAGKAWSVEQRALVTR 395

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  +I RFE+TRDIRL+G Y+ GVD  LD AV QVP+IY+ L Q P D  S D F ++ +
Sbjct: 396 LKSMISRFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQGPKDRPSADPFSDLAR 455

Query: 436 KLQ 438
            L+
Sbjct: 456 HLK 458


>gi|312792650|ref|YP_004025573.1| atpase, flii/yscn family [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312876500|ref|ZP_07736483.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796711|gb|EFR13057.1| flagellar protein export ATPase FliI [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|312179790|gb|ADQ39960.1| ATPase, FliI/YscN family [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 431

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 159/436 (36%), Positives = 247/436 (56%), Gaps = 9/436 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            +E L    E+   N     G+++ +     T+      V +G     +   ++ L +V+
Sbjct: 1   MIEKLKSKVEN--ANFYQFTGFVNQVIG--LTIESQGPAVSIGTLCRIKAAKTETLAEVV 56

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
               + V + P      +  G  V        +       GR+++ LG+PIDG   + K 
Sbjct: 57  GFKENKVLLMPYSDLVGVFPGCKVIAQDSIFEVKVGKELLGRILDGLGQPIDGKGEI-KS 115

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +   + ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL M A
Sbjct: 116 KIKYPVENRAPNPLERPRIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIA 175

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +++L+GERGRE++EF+ +D   + LK+SVVVVATSDES + R  A   A+ I
Sbjct: 176 RNAKADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAI 235

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G + 
Sbjct: 236 AEYFRDQGLDVLFLMDSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSVMPKLLERAGKNR 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+ITA+ +VLVDGD+ N+PI D+ R ILDGHIVL+R++A +  YP +D LAS+SR+ 
Sbjct: 296 K--GSITALFTVLVDGDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVM 353

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +       ++L +    ++  + E  D+  IG Y  G +  +D+A+  +P I  FL+Q  
Sbjct: 354 NDIVDPSHRELANETKRVLAVYREAEDLINIGAYTKGSNPEIDRAIELLPRINQFLRQDV 413

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+ K +
Sbjct: 414 DERFEFEEEIEMLKAI 429


>gi|161511087|ref|NP_773525.2| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
          Length = 441

 Score =  342 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 212/425 (49%), Positives = 292/425 (68%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYIC 73
             S  L    G IS I   ++ V+ LS++V LG+ +         +G+V+RI+ + +   
Sbjct: 15  QQSTPLASVSGAISEIAPTHFRVSGLSRFVRLGELIGVNSGGKPQIGEVVRIDSEGIIAK 74

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           P        LG + +       +P   W GRVINALG P+DG   L  G  ++   ++ P
Sbjct: 75  PFDRQFAGGLGSVAYRMPPLSFAPDPSWKGRVINALGAPLDGQGPLTPGSRAVSAEAEAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
            AM R RV K  +TG+RVID+F P+C GQR+G+FAGSG+GKSTLL+M ARS  FD V+++
Sbjct: 135 SAMKRARVHKPLRTGVRVIDLFAPICAGQRVGIFAGSGVGKSTLLAMLARSQGFDTVVLA 194

Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           LVGERGREVREFIED LG N  ++V +V+T DESP++R++AP TA+ +AEYF  +G++VL
Sbjct: 195 LVGERGREVREFIEDVLGANRNRAVTIVSTGDESPMMRRLAPKTAMAVAEYFRDRGESVL 254

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DSITRFAH+ RE+A  +GE  VARGY  +VF++LPRLLER GP E+  G IT + SV
Sbjct: 255 LVVDSITRFAHAAREVALAAGEPAVARGYAPTVFTDLPRLLERAGPGEEGSGTITGIFSV 314

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LVDGD+HN+PIAD++RS LDGHIVL+R +A++ RYP VD LASVSRLA   W  +E++LV
Sbjct: 315 LVDGDDHNEPIADTIRSTLDGHIVLSRHIADQARYPAVDVLASVSRLAHNVWDPEERELV 374

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           S L  +I ++E+TRD+RL+GGY+ G D  LD+A+  VP IY  ++Q  S   S D F+E+
Sbjct: 375 SKLRTMIAKYEDTRDLRLMGGYQSGRDSGLDQAIDLVPRIYSAMRQDASAQPSADPFREL 434

Query: 434 TKKLQ 438
              L+
Sbjct: 435 RDMLK 439


>gi|115523167|ref|YP_780078.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisA53]
 gi|115517114|gb|ABJ05098.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris BisA53]
          Length = 443

 Score =  342 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 222/432 (51%), Positives = 303/432 (70%), Gaps = 2/432 (0%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           TLA L +D     V  GG +S +   +Y V  LS+ V LG+ +  +  N   +G+VIRI+
Sbjct: 10  TLASLHKDV--PTVRLGGTVSEVAPTHYRVAGLSRLVKLGELIGLEVDNQMQIGEVIRID 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
            + V   P        LG + +      +SP   W GRVINALG+P+DG   L  G+  M
Sbjct: 68  GNGVTAKPFESHVAAGLGLIAYRLPPKTLSPHPSWKGRVINALGQPLDGAGVLLAGEREM 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
              +  PPAM+R RV    +TG+RVID+F+P+C GQRIG+FAGSG+GK+TLLSM A+S  
Sbjct: 128 STDANPPPAMSRARVRAPLQTGVRVIDLFSPICVGQRIGIFAGSGVGKTTLLSMMAQSAG 187

Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           FD V+ +LVGERGREVREF+E+ L  +  ++V VV+TSDESP++R++A  TA TIAEYF 
Sbjct: 188 FDTVVTALVGERGREVREFLEEALVHHKSRAVTVVSTSDESPMMRRLAAKTATTIAEYFR 247

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G++VLLI+DS+TRFAH+ RE+A  +GE  +ARGY  SVFSE+PRLLER GP    +G+
Sbjct: 248 DRGESVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSEIPRLLERSGPGIDGQGS 307

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLVDGD+HN+P+AD+VRS LDGHIVL+R +A++GRYP V+ L+SVSRLA   WS
Sbjct: 308 ITGIFAVLVDGDDHNEPVADTVRSTLDGHIVLDREVADQGRYPAVNVLSSVSRLAQHVWS 367

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +E+ LV  L  +I RFE+TRD+RL+GGY+PG D  LD+AV  VP IY+ ++Q+PSD   
Sbjct: 368 PEERNLVRKLRAMIARFEDTRDLRLMGGYQPGRDSELDQAVQLVPKIYEVMQQAPSDPGC 427

Query: 427 EDVFQEITKKLQ 438
            + FQE+   ++
Sbjct: 428 TEPFQELLAVIK 439


>gi|188579924|ref|YP_001923369.1| flagellum-specific ATP synthase [Methylobacterium populi BJ001]
 gi|179343422|gb|ACB78834.1| ATPase, FliI/YscN family [Methylobacterium populi BJ001]
          Length = 442

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 210/438 (47%), Positives = 296/438 (67%), Gaps = 2/438 (0%)

Query: 3   KNLETLAQLAE--DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
             +E L +  E     + LV  GG +  +T+    V  +S +V LGD +         +G
Sbjct: 4   NAIERLRKAMEAGRRDRPLVRVGGPVREVTASAARVAGVSAFVRLGDRMGFSADGRVQVG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI+     + P     E  +G L    G  ++ P   W GRVI+ALG+P+DG   L 
Sbjct: 64  EVVRIDSAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLA 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +G  S+ + +  P AM R RV     TG+R +D+FTPLC GQRIG+FAGSG+GKSTLL+M
Sbjct: 124 EGPDSVPLDADPPAAMTRARVRTPLPTGVRAVDLFTPLCAGQRIGIFAGSGVGKSTLLAM 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            A ++ FD V+++LVGERGREVREF+E  +  + +++V+VV+T DESP++R+ AP  A+ 
Sbjct: 184 LAGAEGFDSVVVALVGERGREVREFLEGPIAASRERAVIVVSTGDESPMMRRQAPKVALA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP 
Sbjct: 244 VAECFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPG 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP +D L S+SRL
Sbjct: 304 AEGSGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIDLLGSISRL 363

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A + W+ D+++LV  L  ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q 
Sbjct: 364 AGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQE 423

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P    S D F E+ + L+
Sbjct: 424 PGQPPSRDAFLELAQSLR 441


>gi|319403956|emb|CBI77544.1| Flagellum-specific ATP synthase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 510

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 226/436 (51%), Positives = 300/436 (68%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
             L   A+   D+  +LV QGG IS +         LSQ V LGD V  + ++    G++
Sbjct: 73  NRLLDFAKHKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVSVECESQFLRGEI 132

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+N + V I P        L   VF  G   ++P   WCGR++NA G+ IDG   L  G
Sbjct: 133 IRVNEESVLIKPYDETVVPMLSASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGGLSSG 192

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             +M I +  PPA+ R RV  G +TGI+VIDIFTPLC GQRIGVF+GSG+GKSTLLSM  
Sbjct: 193 PRNMAIETYAPPALKRARVGAGLRTGIKVIDIFTPLCFGQRIGVFSGSGVGKSTLLSMMM 252

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           ++D FD V+++L GERGREVR+ ++D L D L K + V+AT DESP++R++AP+ A TIA
Sbjct: 253 QADHFDTVVLALTGERGREVRDMLDDVLHDKLHKLIGVIATGDESPMMRRLAPIMATTIA 312

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYFSS GDNVLL++DS+TR+A + REIA  + E PV+RG+P  VFSELPRLLER GP  +
Sbjct: 313 EYFSSLGDNVLLVVDSVTRYALATREIAITAHEPPVSRGFPPRVFSELPRLLERAGPGRE 372

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA 
Sbjct: 373 GKGSITGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLAS 432

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             W+ ++  LV +L  +I R+EETRD+R +G YRPG D +LD+AV  VP IY  +KQSP 
Sbjct: 433 HNWTPEQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPD 492

Query: 423 DLSSEDVFQEITKKLQ 438
                D ++E+ K L+
Sbjct: 493 MALISDPYEELAKLLK 508


>gi|302872568|ref|YP_003841204.1| ATPase, FliI/YscN family [Caldicellulosiruptor obsidiansis OB47]
 gi|302575427|gb|ADL43218.1| ATPase, FliI/YscN family [Caldicellulosiruptor obsidiansis OB47]
          Length = 434

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 162/424 (38%), Positives = 244/424 (57%), Gaps = 9/424 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M   LE L    E+   N     G+++ +     T+      V +G     +   ++ L 
Sbjct: 1   MIDMLEKLKSKVEN--TNFYQFTGFVNQVIG--LTIESQGPAVSIGTLCRIKAVKTETLA 56

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + V + P      +  G  V        I       GR+++ LG+PIDG   +
Sbjct: 57  EVVGFKDNKVLLMPYSDLVGVFPGCKVIAQDSIFEIKVGNELLGRILDGLGQPIDGKGEI 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K  +   + ++ P  + R R++     GI+ ID    +  GQR+G+FAGSG+GKSTLL 
Sbjct: 117 -KSKIKYPVENRAPNPLERPRIDTIMPLGIKAIDALLTIGRGQRVGIFAGSGVGKSTLLG 175

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +++L+GERGRE++EF+ +D   + LK+SVVVVATSDES + R  A   A
Sbjct: 176 MIARNAKADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + IAEYF  +G +VL ++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G
Sbjct: 236 MAIAEYFRDQGLDVLFLMDSLTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++K  G+ITA+ +VLVDGD+ N+PI D+ R ILDGHIVL+R++A +  YP VD LAS+S
Sbjct: 296 KNQK--GSITALFTVLVDGDDFNEPITDTARGILDGHIVLSRAIANKNHYPAVDVLASIS 353

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +    +  ++L +    ++  + E  D+  IG Y  G +  +D+A+  VP I  FL+
Sbjct: 354 RVMNDIVESSHRELANETKRILAVYREAEDLINIGAYTKGSNPEIDRAIELVPRINQFLR 413

Query: 419 QSPS 422
           Q   
Sbjct: 414 QDVD 417


>gi|13472571|ref|NP_104138.1| flagellum-specific ATP synthase [Mesorhizobium loti MAFF303099]
 gi|14023317|dbj|BAB49924.1| flagella-specific ATPase; FliI [Mesorhizobium loti MAFF303099]
          Length = 466

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 235/437 (53%), Positives = 317/437 (72%), Gaps = 3/437 (0%)

Query: 4   NLETLAQLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
            L  L ++   +S    LV +GG ++ +T  +Y V  LS +  LGD V  +G+     G+
Sbjct: 22  RLAALERVIRRFSNTDGLVKRGGLVTEVTQTHYKVRGLSDFARLGDMVEQRGQAGSRRGE 81

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +++I+ D V + P     +  +GD VF  G   + P   W GR I+AL + IDG   L +
Sbjct: 82  IVKISRDEVVVAPFERSADAGIGDAVFRRGPLAVGPHNSWRGRTIDALTRAIDGGPPLIR 141

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G+  +   +  P AM RQRV   F TG++VIDIFTPLC GQR+GVFAGSG+GKSTLL+M 
Sbjct: 142 GE-DLSGGATTPGAMARQRVGTAFMTGVKVIDIFTPLCFGQRMGVFAGSGVGKSTLLAML 200

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           A +D FD V+++L+GERGREVREF+ED +GD++ K+V VVATSDES ++R+ AP TA+ +
Sbjct: 201 AGADAFDTVVVALIGERGREVREFLEDTIGDSMAKTVAVVATSDESAMMRRRAPDTAMRV 260

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +G  VLL+LDSITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP  
Sbjct: 261 AEHFRDQGHRVLLVLDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGA 320

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           + KG+ITA+ISVLVDGD+HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA
Sbjct: 321 EGKGSITAIISVLVDGDDHNDPVADSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISRLA 380

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KAWS +++ LV+ L  +I RFE+TRDIRL+G Y+ G D  LD AV QVP+IY+ L QSP
Sbjct: 381 GKAWSVEQRALVTRLKSMISRFEDTRDIRLLGAYQGGADAELDIAVRQVPLIYEALTQSP 440

Query: 422 SDLSSEDVFQEITKKLQ 438
            D  S D F ++ + L+
Sbjct: 441 RDRPSADPFSDLARHLK 457


>gi|304316905|ref|YP_003852050.1| ATPase, FliI/YscN family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778407|gb|ADL68966.1| ATPase, FliI/YscN family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 438

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 171/428 (39%), Positives = 255/428 (59%), Gaps = 9/428 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYIC 73
             K+ +   G +S +     T+  +     +GD    +  N + +  +V+    D VY+ 
Sbjct: 15  RDKSFIKYYGKVSQVVG--LTIESIGPISNVGDVCEIKSINGNTIYAEVMGFKDDKVYLM 72

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G  + I  G+ V   G + +I       GRVI+ALG PIDG   + K    +   +  
Sbjct: 73  PLGDMDGIGPGNSVISTGQKLKIGVGEELLGRVIDALGNPIDGKGPI-KFKKLVSTNNVP 131

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  +I
Sbjct: 132 PNPIERKRIREAMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMIARNAKSDINVI 191

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EFI +D   D LK+S++VV+TSD   ++R    +TA +IAEYF  +G +
Sbjct: 192 ALIGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMTATSIAEYFRDQGLD 251

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL ++DS+TRFA + REI  + GE PV+RGY  SVFS LP+LLER G ++   G+ITA+ 
Sbjct: 252 VLFMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSAKN--GSITALY 309

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ N+PI D+VR ILDGHIVL+R LA +G+YP +D LAS+SR+ +   S + K 
Sbjct: 310 TVLVDGDDLNEPITDAVRGILDGHIVLSRKLANKGQYPAIDILASISRVMNDIVSDEHKN 369

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVF 430
           L S    ++  +EE+ D+  IG Y  G +  +D+A+     + +++KQ+  +  + ED  
Sbjct: 370 LSSKFKSILSVYEESEDLINIGAYAKGSNPKIDEAILLHDDMINYIKQTTDENYNFEDEL 429

Query: 431 QEITKKLQ 438
             +   L 
Sbjct: 430 NMLKNILN 437


>gi|323705443|ref|ZP_08117018.1| ATPase, FliI/YscN family [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535345|gb|EGB25121.1| ATPase, FliI/YscN family [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 438

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 169/416 (40%), Positives = 251/416 (60%), Gaps = 8/416 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICP 74
            KN +   G +S +     T+  +     +GD    +  N      +V+    D VY+ P
Sbjct: 16  DKNFIKYYGKVSQVVG--LTIESVGPISNIGDVCEIRSINGTTVYAEVMGFKDDKVYLMP 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + I  G+ V   G + +I       GRVI+ALG PIDG  ++ K    +   +  P
Sbjct: 74  LGDMDGIGPGNSVVSTGQKLKIGVGKELLGRVIDALGNPIDGKGAI-KCKKLVSTNNTPP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R+ +    GI+ ID       GQRIG+FAGSG+GKSTLL M AR+   D  +I+
Sbjct: 133 NPIERKRISEVMTLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMIARNAKSDINVIA 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EFI +D   D LK+S++VV+TSD   ++R    + A +IAEYF  +G +V
Sbjct: 193 LIGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMAATSIAEYFRDQGLDV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REI  + GE PV+RGY  SVFS LP+LLER G S+   G+ITA+ +
Sbjct: 253 LLMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSSK--HGSITALYT 310

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PI D+VR ILDGHIVL+R LA +G+YP +D L+S+SR+ +   + + K L
Sbjct: 311 VLVDGDDLNEPITDAVRGILDGHIVLSRKLANKGQYPAIDVLSSISRVMNDIVTDEHKNL 370

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                +++  +EE+ D+  IG Y  G +  +D+A+     + +++KQS ++    D
Sbjct: 371 SLRFKNILSVYEESEDLINIGAYAKGSNPKIDEAILLHDDMINYIKQSTNEKYDFD 426


>gi|15642991|ref|NP_228033.1| flagellum-specific ATP synthase [Thermotoga maritima MSB8]
 gi|4980716|gb|AAD35310.1|AE001706_9 flagellum-specific ATP synthase [Thermotoga maritima MSB8]
          Length = 438

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 170/440 (38%), Positives = 259/440 (58%), Gaps = 14/440 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNL 59
           M+  L+ L +  +   ++     G ++ +     TV        LG+      +N  + L
Sbjct: 1   MKDILKELKK--KLSEEDFNKFNGRVTRVVG--LTVESKGPDAFLGEMCKISLQNGKNAL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P      + +G  V    +   +  S    GRV + LG+PIDG   
Sbjct: 57  AEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDGLGRPIDGKPF 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    +++  P  + R+R++     GIR ID F  +  GQRIG+FAGSG+GKSTLL
Sbjct: 117 VP--EDRYPLINNPPNPLKRRRIKDPLPVGIRSIDGFITIGKGQRIGIFAGSGVGKSTLL 174

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +++L+GERGREVREFI  D   + LK+S++VV+TSD+  + R  + LT
Sbjct: 175 GMIARNTTADINVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQPALARVKSLLT 234

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAE+F   G +VLL++DS+TR+A + RE+    GE P  RGYP SVF+ LP++LER 
Sbjct: 235 ATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVFAGLPKILERA 294

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE   YP VD LASV
Sbjct: 295 GNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNHYPAVDVLASV 352

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL +   + + ++  + L  L+  +E  +D+  IG Y+ G + ++DKAV     I  FL
Sbjct: 353 SRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAVEMKDEIDSFL 412

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           KQ   + +S   F+E  +KL
Sbjct: 413 KQGVFEKAS---FEETLQKL 429


>gi|254559267|ref|YP_003066362.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
 gi|254266545|emb|CAX22309.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
          Length = 442

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 210/439 (47%), Positives = 293/439 (66%), Gaps = 2/439 (0%)

Query: 2   QKNLETLAQLAE--DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +  +E L Q  E       LV   G +  +T+    V  +S +V LGD +         +
Sbjct: 3   RNAIERLEQAMEAGRRDLPLVRIAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQV 62

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+RI+     + P     E  +G L    G  ++ P   W GRVI+ALG+P+DG   L
Sbjct: 63  GEVVRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPL 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G  S+ + +  P AM R RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+
Sbjct: 123 AEGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLA 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M A +  FD V+++LVGERGREVREF+E  +     ++V+VV+T DESP++R+ AP  A+
Sbjct: 183 MLAGAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVAL 242

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP
Sbjct: 243 AVAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGP 302

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             +  G IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+SR
Sbjct: 303 GAEGTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISR 362

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           LA + W+ D+++LV  L  ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q
Sbjct: 363 LAGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQ 422

Query: 420 SPSDLSSEDVFQEITKKLQ 438
            P    S D F E+ + L+
Sbjct: 423 EPGQPPSRDAFLELAQSLR 441


>gi|217977820|ref|YP_002361967.1| flagellum-specific ATP synthase [Methylocella silvestris BL2]
 gi|217503196|gb|ACK50605.1| ATPase, FliI/YscN family [Methylocella silvestris BL2]
          Length = 449

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 224/429 (52%), Positives = 300/429 (69%), Gaps = 2/429 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLD 68
           + +  ++ LV   G ++ ++  +  V  LS +V LG+ V    + + + N G+V+RI+  
Sbjct: 17  MTQAAAEPLVRVSGAVTELSPSHARVAGLSSFVKLGECVRFGPEAEGARNRGEVVRIDAQ 76

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
            V +     G   SLG+ VF  G  RI+P   W GRV+NA G PIDG   L +GD S  I
Sbjct: 77  GVIVKTFEAGALTSLGERVFRAGPLRIAPHPGWKGRVVNAFGAPIDGAGPLPQGDRSAMI 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P AM R RV    +TG+RVIDIFTPLC GQRIG+FAGSG+GKSTLL+M A S  FD
Sbjct: 137 DAPPPSAMRRARVAWPLRTGVRVIDIFTPLCAGQRIGIFAGSGVGKSTLLAMLAGSKDFD 196

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            V+++LVGERGREVREF++D L  N   SV VVAT DE+P +R++AP TA+ IAE+F  +
Sbjct: 197 TVVVALVGERGREVREFLDDALAANRPISVAVVATGDETPSMRRLAPRTAMAIAEFFRDR 256

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           GD VLLI+DS+TRFAH+ R++A  +GE PVARGY  SVFS+LP+LLER GP E+  G+IT
Sbjct: 257 GDRVLLIIDSVTRFAHAARDVALAAGEPPVARGYTPSVFSDLPKLLERAGPGEEGGGSIT 316

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            V SVLVDGD+HNDP+AD+VR  LDGHIVL+R++A++GR+P V+ LAS+SRLA  AW+A+
Sbjct: 317 GVFSVLVDGDDHNDPVADAVRGTLDGHIVLDRAIADQGRFPAVNVLASISRLAQIAWTAE 376

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++ LV  L  +I RFE++ D+RL+GGY+ G D  LD+AV   P IY  L+QSP    S D
Sbjct: 377 QRDLVVKLRGMIARFEDSSDLRLMGGYKAGQDADLDQAVALAPKIYKALQQSPQSTPSAD 436

Query: 429 VFQEITKKL 437
            F+E+ + L
Sbjct: 437 AFRELAQSL 445


>gi|170748126|ref|YP_001754386.1| flagellum-specific ATP synthase [Methylobacterium radiotolerans JCM
           2831]
 gi|170654648|gb|ACB23703.1| ATPase, FliI/YscN family [Methylobacterium radiotolerans JCM 2831]
          Length = 439

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 211/430 (49%), Positives = 285/430 (66%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           A L       L+  GG +  I + +  +      + LGD +  +    +  G+V+RI+ D
Sbjct: 9   AMLGRRDDPPLIRIGGSVREIGAGHCRIRIAVPLLRLGDRMRIEAAGREIDGEVVRIDED 68

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
            V + P     E  LG   +        P   W  RV+NALG PIDG   L  G  +M +
Sbjct: 69  GVILKPFEGRIEAGLGAPAYRVPTSGARPCEAWKDRVVNALGTPIDGKGDLPTGTRAMPL 128

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  PPAM R RV+   +TG+R +D+FTPLC  QRIG+FAGSG+GK+TLLSM AR   FD
Sbjct: 129 DADPPPAMARSRVDSPLRTGVRAMDLFTPLCAAQRIGIFAGSGVGKTTLLSMLARCSGFD 188

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            V+++LVGERGREVREF+E  + ++  ++VVVVAT DESP++R+ AP  A  +AEYF  +
Sbjct: 189 AVVVALVGERGREVREFLEGPMRESRSRAVVVVATGDESPMMRRQAPKLAFAVAEYFRDQ 248

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL+LDS+TRFAH+ RE+A  +GE PVARGYP SVF +LPRLLER GP     G IT
Sbjct: 249 GQSVLLVLDSVTRFAHAAREVALAAGEPPVARGYPPSVFGDLPRLLERAGPGLDGGGAIT 308

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + SVLVDGD+HNDP+ADS+R  LDGHIVL+R++A++GRYP +D L S+SRLAD+ W+  
Sbjct: 309 GLFSVLVDGDDHNDPVADSIRGTLDGHIVLDRAIADQGRYPAIDVLGSISRLADRVWTEQ 368

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +++LV  L  LI R+E++RD+RL+GGY  G D  LD+AV  VP IYD L+Q P+D  S D
Sbjct: 369 QRQLVRMLKSLIARYEDSRDLRLMGGYHVGADPELDQAVALVPKIYDALRQDPTDPQSLD 428

Query: 429 VFQEITKKLQ 438
            F ++   L+
Sbjct: 429 AFLDLATALR 438


>gi|218528726|ref|YP_002419542.1| flagellum-specific ATP synthase [Methylobacterium chloromethanicum
           CM4]
 gi|218521029|gb|ACK81614.1| ATPase, FliI/YscN family [Methylobacterium chloromethanicum CM4]
          Length = 442

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 210/438 (47%), Positives = 292/438 (66%), Gaps = 2/438 (0%)

Query: 3   KNLETLAQLAE--DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
             +E L Q  E       LV   G +  +T+    V  +S +V LGD +         +G
Sbjct: 4   NAIERLEQAMEAGRRDLPLVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI+     + P     E  +G L    G  ++ P   W GRVI+ALG+P+DG   L 
Sbjct: 64  EVVRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLA 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +G  S+ + +  P AM R RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M
Sbjct: 124 EGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAM 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            A +  FD V+++LVGERGREVREF+E  +     ++V+VV+T DESP++R+ AP  A+ 
Sbjct: 184 LAGAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP 
Sbjct: 244 VAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPG 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+SRL
Sbjct: 304 AEGTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRL 363

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A + W+ D+++LV  L  ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q 
Sbjct: 364 AGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQE 423

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P    S D F E+ + L+
Sbjct: 424 PGQPPSRDAFLELAQSLR 441


>gi|319406972|emb|CBI80609.1| Flagellum-specific ATP synthase [Bartonella sp. 1-1C]
          Length = 510

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 226/436 (51%), Positives = 300/436 (68%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
             L   A+   D+  +LV QGG IS +         LSQ V LGD V  + ++    G++
Sbjct: 73  NRLLDFAKHKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVSVECESQFLRGEI 132

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+N + V I P        L   VF  G   ++P   WCGR++NA G+ IDG   L  G
Sbjct: 133 IRVNEESVLIKPYDETVVPMLSASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGGLSSG 192

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             +M I +  PPA+ R RV  G +TGI+VIDIFTPLC GQRIGVF+GSG+GKSTLLSM  
Sbjct: 193 PRNMAIETYAPPALKRARVGAGLRTGIKVIDIFTPLCFGQRIGVFSGSGVGKSTLLSMMM 252

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           ++D FD V+++L GERGREVR+ ++D L D L K + V+AT DESP++R++AP+ A TIA
Sbjct: 253 QADHFDTVVLALTGERGREVRDMLDDVLHDKLHKLIGVIATGDESPMMRRLAPIMATTIA 312

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYFSS GDNVLL++DS+TR+A + REIA  + E PV+RG+P  VFSELPRLLER GP  +
Sbjct: 313 EYFSSLGDNVLLVVDSVTRYALATREIAITAHEPPVSRGFPPRVFSELPRLLERAGPGRE 372

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA 
Sbjct: 373 GKGSITGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLAS 432

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             W+ ++  LV +L  +I R+EETRD+R +G YRPG D +LD+AV  VP IY  +KQSP 
Sbjct: 433 HNWTPEQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPD 492

Query: 423 DLSSEDVFQEITKKLQ 438
                D ++E+ K L+
Sbjct: 493 MGLISDPYEELAKLLK 508


>gi|240137256|ref|YP_002961725.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
 gi|240007222|gb|ACS38448.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
          Length = 442

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 210/438 (47%), Positives = 292/438 (66%), Gaps = 2/438 (0%)

Query: 3   KNLETLAQLAE--DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
             +E L +  E       LV   G +  +T+    V  +S +V LGD +         +G
Sbjct: 4   NAIERLERAMEAGRRDLPLVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI+     + P     E  +G L    G  ++ P   W GRVI+ALG+PIDG   L 
Sbjct: 64  EVVRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPIDGLGPLA 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +G  S+ + +  P AM R RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M
Sbjct: 124 EGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAM 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            A +  FD V+++LVGERGREVREF+E  +     ++V+VV+T DESP++R+ AP  A+ 
Sbjct: 184 LAGAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP 
Sbjct: 244 VAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPG 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+SRL
Sbjct: 304 AEGTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRL 363

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A + W+ D+++LV  L  ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q 
Sbjct: 364 AGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQE 423

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P    S D F E+ + L+
Sbjct: 424 PGQPPSRDAFLELAQSLR 441


>gi|121602501|ref|YP_989404.1| flagellum-specific ATP synthase [Bartonella bacilliformis KC583]
 gi|120614678|gb|ABM45279.1| flagellum-specific ATP synthase [Bartonella bacilliformis KC583]
          Length = 537

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 227/435 (52%), Positives = 302/435 (69%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            L +      +YS + + QGG IS +     T   LSQ V LGD V  +       G++I
Sbjct: 101 RLLSFVTHNCEYSSHSINQGGVISDVARGILTARGLSQSVFLGDTVCIECGTQTVRGEII 160

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           R+N + V I P        L   VF  G   ++P A WCGRV+NA G+ IDG  +L  G 
Sbjct: 161 RVNEESVLIKPYDETIVPVLKASVFPQGPLFVAPDASWCGRVVNAFGEAIDGKGALLLGS 220

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M + +  PPA+ R RV  G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM  +
Sbjct: 221 SPMAVEAHAPPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMMQ 280

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +D FDKV+++L GERGREVR+ ++D L D L K V V+ATSDESP++R++AP+ A TIAE
Sbjct: 281 ADHFDKVVLALTGERGREVRDMLDDTLQDKLDKVVAVIATSDESPMMRRLAPIMATTIAE 340

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YFSS GDNVLL++DSITR+A ++REIA ++ E PV+RG+P  VFSELPRLLER GP  K 
Sbjct: 341 YFSSLGDNVLLVVDSITRYALAVREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGRKG 400

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD  +S+SRLA  
Sbjct: 401 KGSITGVYAVLVDGDDHNDPIADAIRGILDGHIVLDRAIAAQGRFPAVDISSSISRLASH 460

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +W+ +++ LV SL  +I R+EETRD+R +G YRPG D ILD+AVH VP IY  + Q+   
Sbjct: 461 SWTGEQRILVQSLKEMIFRYEETRDLRAMGAYRPGTDHILDQAVHLVPSIYAAMNQNIDT 520

Query: 424 LSSEDVFQEITKKLQ 438
               + + E+ K L+
Sbjct: 521 PLVRNPYDELAKLLK 535


>gi|260893872|ref|YP_003239969.1| flagellar protein export ATPase FliI [Ammonifex degensii KC4]
 gi|260866013|gb|ACX53119.1| flagellar protein export ATPase FliI [Ammonifex degensii KC4]
          Length = 436

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 178/425 (41%), Positives = 246/425 (57%), Gaps = 12/425 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPV 75
             L  Q G +S +  +   V  +  +V  G+  + +       + +      D+V + P 
Sbjct: 14  PTLCQQVGVVSKVVGLTLEVKGIKPFV--GEVCLVELSPGKYVVAEAAGFREDVVLLMPF 71

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    I  G  V+   R F +       GRV+N LG+PIDG   L  G + + + ++ P 
Sbjct: 72  GELTGIRPGCRVYPRRRPFTVRVGEHLLGRVLNGLGEPIDGK-PLPSG-IPLPVNNRPPS 129

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R+R+E+ F TG+R ID F     GQRIG+FAGSG+GKSTLL M AR    D  +I+L
Sbjct: 130 PLARRRIEEVFVTGVRAIDAFITCGRGQRIGIFAGSGVGKSTLLGMIARFGNADVNVIAL 189

Query: 195 VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREV EFI +D   + L KSVVVVATSDE  +LR  A   A TIAEYF   G +VL
Sbjct: 190 VGERGREVLEFIEKDLGEEGLAKSVVVVATSDEPALLRLRAAFVATTIAEYFRDTGRHVL 249

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G + K  G+IT   +V
Sbjct: 250 LLMDSLTRFALAQREVGLAVGEPPTTRGYTPSVFALLPRLLERAGNAAK--GSITGFYTV 307

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+ N+PI D+ RSILDGHIVL+R LA+   YP +D LASVSRL     + + ++  
Sbjct: 308 LVEGDDLNEPITDAARSILDGHIVLSRQLAQANHYPAIDVLASVSRLMSAVVTPEHREAA 367

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             L  L+  + +  D+  IG Y  G +  +D+A+   P +  FL+Q P + +S   F E 
Sbjct: 368 DLLRSLLAAYRQNEDLINIGAYVSGSNPTVDRAIALYPELVAFLRQKPEEYTS---FPEC 424

Query: 434 TKKLQ 438
             +L+
Sbjct: 425 VARLK 429


>gi|260466624|ref|ZP_05812812.1| ATPase, FliI/YscN family [Mesorhizobium opportunistum WSM2075]
 gi|259029630|gb|EEW30918.1| ATPase, FliI/YscN family [Mesorhizobium opportunistum WSM2075]
          Length = 466

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 238/439 (54%), Positives = 319/439 (72%), Gaps = 3/439 (0%)

Query: 2   QKNLETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +  L  L ++   +S    LV +GG ++ +T  +Y V  LS +  LGD V  +G      
Sbjct: 20  EDRLAALERVWRRFSGADALVKRGGLVTEVTPTHYKVRGLSDFARLGDIVEQRGLAGARR 79

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G++++I+ D V + P     +  +GD VF  G   ++P   W GR I+AL + IDG   L
Sbjct: 80  GEIVKISRDEVVVAPFERSADAGIGDAVFRRGPLAVAPHGSWRGRTIDALTRAIDGGPPL 139

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +GD  M   +  P AM RQRV   F TG++VIDIFTPLC GQR+GVFAGSG+GKSTLL+
Sbjct: 140 VRGD-DMAASATTPGAMARQRVGTAFMTGVKVIDIFTPLCLGQRLGVFAGSGVGKSTLLA 198

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M A +D FD V+++L+GERGREVREF+ED +GD++ K+V VVATSDES ++R+ AP TA+
Sbjct: 199 MLAGADAFDTVVVALIGERGREVREFLEDTIGDSMAKTVAVVATSDESAMMRRRAPDTAM 258

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AE+F  +G  VLL+LDSITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP
Sbjct: 259 RVAEHFRDQGHRVLLVLDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGP 318

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             + KG+ITA+ISVLVDGD+HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SR
Sbjct: 319 GAEGKGSITAIISVLVDGDDHNDPVADSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISR 378

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           LA KAWS +++ LV+ L  +I RFE+TRDIRL+G Y+ GVD  LD AV QVP+IY+ L Q
Sbjct: 379 LAGKAWSLEQRALVTRLKSMISRFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQ 438

Query: 420 SPSDLSSEDVFQEITKKLQ 438
           SP D  S D F ++ + L+
Sbjct: 439 SPRDRPSTDPFSDLARHLK 457


>gi|281412275|ref|YP_003346354.1| flagellar protein export ATPase FliI [Thermotoga naphthophila
           RKU-10]
 gi|281373378|gb|ADA66940.1| flagellar protein export ATPase FliI [Thermotoga naphthophila
           RKU-10]
          Length = 438

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 170/440 (38%), Positives = 257/440 (58%), Gaps = 14/440 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNL 59
           M+  L+ L +  +   ++     G ++ +     TV        LG+      +N  + L
Sbjct: 1   MKDILKELKK--KLSEEDFNKFNGRVTRVVG--LTVESKGPDAFLGEMCKISLQNGKNAL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P      + +G  V    +   +  S    GRV + LG+PIDG   
Sbjct: 57  AEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDGLGRPIDGKPF 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    + +  P  + R+R++     GIR ID    +  GQRIG+FAGSG+GKSTLL
Sbjct: 117 VP--EDRYPLTNNPPNPLKRRRIKDPLPVGIRSIDGLITVGKGQRIGIFAGSGVGKSTLL 174

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +++L+GERGREVREFI  D   + LK+S++VV+TSD+  + R  + LT
Sbjct: 175 GMIARNTTADVNVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQPALARVKSLLT 234

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAE+F   G +VLL++DS+TR+A + RE+    GE P  RGYP SVF+ LP++LER 
Sbjct: 235 ATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVFAGLPKILERA 294

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE   YP VD LASV
Sbjct: 295 GNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNHYPAVDVLASV 352

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL +   + + ++  + L  L+  +E  +D+  IG Y+ G + ++DKAV     I  FL
Sbjct: 353 SRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAVEMKDEIDSFL 412

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           KQ   + SS   F+E  +KL
Sbjct: 413 KQGVFEKSS---FEETLQKL 429


>gi|319898632|ref|YP_004158725.1| flagellum-specific ATP synthase [Bartonella clarridgeiae 73]
 gi|319402596|emb|CBI76141.1| Flagellum-specific ATP synthase [Bartonella clarridgeiae 73]
          Length = 514

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 224/435 (51%), Positives = 299/435 (68%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            L   A+  +DY   LV QGG IS +         LSQ V LGD V  + +     G++I
Sbjct: 76  RLFDFARRKDDYYSQLVSQGGIISDVARGTLVARGLSQSVLLGDTVSVECETQLLRGEII 135

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           R+N + V I P        L   VF  G   ++P   W GR++NA G+ IDG   L  G 
Sbjct: 136 RVNEESVLIKPYDETIVPVLSASVFPKGPLFVAPDRSWRGRIVNAFGEAIDGKGILSSGS 195

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +M I +  PPA+ R RV  G +TG++VIDIFTPLC GQR+G+F+GSG+GKSTLLSM  +
Sbjct: 196 QNMAIETYAPPALKRARVGAGLRTGVKVIDIFTPLCFGQRVGIFSGSGVGKSTLLSMMMQ 255

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +D FD VI++L GERGREVR+ ++D L D L K V V+AT DESP++R +AP+ A TIAE
Sbjct: 256 ADHFDTVILALTGERGREVRDMLDDTLQDKLHKLVGVIATGDESPMMRHLAPIMATTIAE 315

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YFSS GDNVLL++DS+TR+A + REIA ++ E PV+RG+P  VFSELPRLLER GP  + 
Sbjct: 316 YFSSLGDNVLLVVDSVTRYALAAREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGREG 375

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT V +VLVDGD+HNDPI+D++R ILDGHIVL+R++A +GR+P VD L+S+SRLA  
Sbjct: 376 KGSITGVYAVLVDGDDHNDPISDAIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASH 435

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +W+ ++  LV +L  +I R+EETRD+R +G YRPG D +LD+AV  VP IY  +KQSP  
Sbjct: 436 SWTPEQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPDV 495

Query: 424 LSSEDVFQEITKKLQ 438
               D ++E+ K L+
Sbjct: 496 PLISDPYEELAKLLK 510


>gi|222099441|ref|YP_002534009.1| Flagellum-specific ATP synthase [Thermotoga neapolitana DSM 4359]
 gi|221571831|gb|ACM22643.1| Flagellum-specific ATP synthase [Thermotoga neapolitana DSM 4359]
          Length = 431

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 165/425 (38%), Positives = 249/425 (58%), Gaps = 12/425 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQVIRINLDIVYICP 74
            ++     G ++ +     TV        LG+      +N  + L +V+      V + P
Sbjct: 7   EEDFNRFNGRVTRVVG--LTVESHGPDAFLGEMCKISLQNGKNALAEVVGFKEGNVVLMP 64

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 + +G  V    R   I       GR+ + LG+P+DG   +   +    + +  P
Sbjct: 65  YEDVSGLKMGCEVIRTNRVLEIGVGRNMIGRIFDGLGRPLDGRSFVP--EARYPLTNSPP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R++     G+R ID F  +  GQRIG+FAGSG+GKSTLL M AR+   D  +++
Sbjct: 123 HPLKRKRIKDPLSVGVRAIDGFITIGKGQRIGIFAGSGVGKSTLLGMIARNTTADVCVLA 182

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFI  D   + LK+S++VV+TSD+  + R  + LTA +IAEY+   G +V
Sbjct: 183 LIGERGREVREFIERDLGEEGLKRSILVVSTSDQPALARVKSLLTATSIAEYYRDLGYDV 242

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + RE+    GE P  RGYP SVF+ LP++LER G S+  +G+ITAV +
Sbjct: 243 LLMVDSLTRWAMAQREVGLAIGEPPTTRGYPPSVFAGLPKILERAGNSD--RGSITAVYT 300

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+ D+ N+PI+D+VRSI+DGHIVL+R LAE   YP +D LASVSRL +   S + K+ 
Sbjct: 301 VLVEADDFNEPISDTVRSIVDGHIVLSRRLAESNHYPAIDVLASVSRLMNDVVSEEHKEA 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            + L  L+  +E  +D+  IG Y+ G + ++DKA+     I  FL+Q   + SS   F+E
Sbjct: 361 ANRLRSLLASYESAKDLIEIGAYKKGTNPLVDKAIEMQEDINAFLRQGIFEKSS---FEE 417

Query: 433 ITKKL 437
             ++L
Sbjct: 418 TVQRL 422


>gi|167628984|ref|YP_001679483.1| ATP synthase f1, alpha subunit [Heliobacterium modesticaldum Ice1]
 gi|226739892|sp|B0THN4|ATPA_HELMI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167591724|gb|ABZ83472.1| ATP synthase f1, alpha subunit [Heliobacterium modesticaldum Ice1]
          Length = 502

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 174/432 (40%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLA----QLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++    Q  E Y K L     G +  +      +  L +    G+ +   G+ 
Sbjct: 1   MSLRPEEISAIIKQQIERYEKPLEAADSGTVIQVGDGIARIYGLEK-AMAGELLEFPGQ- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D +    +G    I  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VYGMVLNLEEDNIGCVILGPYTGIKEGDTVKRTGRIVEVPVGPELIGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I S  P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKQFR-PIESPAPGVIKRKSVHEPLQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +     VI     +G++   V   ++          ++VV AT+ E   L 
Sbjct: 176 TAVAVDTIINQKGQNVICIYVAIGQKASTVAGVVKTLEEHGAMDYTIVVSATASEPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG + L I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFLYKGQHALCIYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDEHGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E   +     +   +D      +++
Sbjct: 356 AINAGISVSRVGGAAQIKAMKQVAGRLRLELAQYRE---LAAFAQFGSDLDKATQARLNR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GQRLVEILKQDQ 424


>gi|170288527|ref|YP_001738765.1| flagellar protein export ATPase FliI [Thermotoga sp. RQ2]
 gi|170176030|gb|ACB09082.1| flagellar protein export ATPase FliI [Thermotoga sp. RQ2]
          Length = 438

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 170/440 (38%), Positives = 258/440 (58%), Gaps = 14/440 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNL 59
           M+  L+ L +  +   ++     G ++ +     TV        LG+      +N  + L
Sbjct: 1   MKDILKELKK--KLIEEDFNKFNGRVTRVVG--LTVESKGPDAFLGEMCKISLQNGKNAL 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P      + +G  V    +   +  S    GRV + LG+PIDG   
Sbjct: 57  AEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDGLGRPIDGKPF 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    + +  P  + R+R++     GIR ID F  +  GQRIG+FAGSG+GKSTLL
Sbjct: 117 VP--EDRYPLTNTPPNPLKRRRIKDPLPVGIRSIDGFITVGKGQRIGIFAGSGVGKSTLL 174

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +++L+GERGREVREFI  D   + LK+S++VV+TSD+  + R  + LT
Sbjct: 175 GMIARNTTADINVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQPALARVKSLLT 234

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAE+F   G +VLL++DS+TR+A + RE+    GE P  RGYP SVF+ LP++LER 
Sbjct: 235 ATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVFAGLPKILERA 294

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE   YP VD LASV
Sbjct: 295 GNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNHYPAVDVLASV 352

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL +   + + ++  + L  L+  +E  +D+  IG Y+ G + ++DKAV     I  FL
Sbjct: 353 SRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAVEMKDEIDSFL 412

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           KQ   + +S   F+E  +KL
Sbjct: 413 KQGVFEKAS---FEETLQKL 429


>gi|163850122|ref|YP_001638165.1| flagellum-specific ATP synthase [Methylobacterium extorquens PA1]
 gi|163661727|gb|ABY29094.1| ATPase, FliI/YscN family [Methylobacterium extorquens PA1]
          Length = 442

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 209/438 (47%), Positives = 292/438 (66%), Gaps = 2/438 (0%)

Query: 3   KNLETLAQLAE--DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
             +E L +  E       LV   G +  +T+    V  +S +V LGD +         +G
Sbjct: 4   NAIERLERAMEAGRRDLPLVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI+     + P     E  +G L    G  ++ P   W GRVI+ALG+P+DG   L 
Sbjct: 64  EVVRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLA 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +G  S+ + +  P AM R RV+    TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M
Sbjct: 124 EGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAM 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            A +  FD V+++LVGERGREVREF+E  +     ++V+VV+T DESP++R+ AP  A+ 
Sbjct: 184 LAGAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP SVFS+LPRLLER GP 
Sbjct: 244 VAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPG 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++AE+GRYP ++ L S+SRL
Sbjct: 304 AEGTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRL 363

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A + W+ D+++LV  L  ++ RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q 
Sbjct: 364 AGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQE 423

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P    S D F E+ + L+
Sbjct: 424 PGQPPSRDAFLELAQSLR 441


>gi|323136552|ref|ZP_08071633.1| ATPase, FliI/YscN family [Methylocystis sp. ATCC 49242]
 gi|322397869|gb|EFY00390.1| ATPase, FliI/YscN family [Methylocystis sp. ATCC 49242]
          Length = 447

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 211/434 (48%), Positives = 291/434 (67%), Gaps = 5/434 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K ++  AQ      K+ V   G ++     ++ V  LS ++ L D V+ +G +     
Sbjct: 9   LRKAVDLYAQ-----EKDWVRIRGVVTEAFPSHFRVEGLSPFLRLDDCVMLEGHDRCFPA 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           Q IRIN D   I        + LG  V   G F I+P   W GRV+NA   PID  +   
Sbjct: 64  QAIRINRDGALIKAFESHAGVGLGARVTRTGPFEIAPHPDWKGRVLNAFAAPIDRREPPP 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G+    + +  P AM+R RV     TG+RV+D FTPLC GQR+GVFAGSG+GKSTLL+M
Sbjct: 124 PGEARRAVDASPPKAMSRGRVRDPAPTGVRVVDAFTPLCRGQRVGVFAGSGVGKSTLLAM 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +RS  FD V+I LVGERGREVR+F+++ LGD    ++ +VAT DESP++R++APLTA +
Sbjct: 184 MSRSAAFDAVVICLVGERGREVRDFLDEILGDRSNLAITIVATGDESPMMRRLAPLTATS 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G++VLLI+DS+TR+AH++REIA ++GE PVA G+  SVF++LPRLLER GP 
Sbjct: 244 IAEYFRDRGESVLLIMDSVTRYAHALREIALSAGEPPVANGFAPSVFADLPRLLERAGPG 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G ITA+ SVL+DGDNHNDPIAD +R  LDGHIVL R +AE+GRYP ++ L S+SRL
Sbjct: 304 VEGGGAITAIFSVLIDGDNHNDPIADCIRGTLDGHIVLEREIAEQGRYPAINVLKSISRL 363

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           AD+ WS +++ L++    LI ++E+TRD+R++GGY+PG D  LD+A+   P +Y+ LKQS
Sbjct: 364 ADRVWSGEQRDLINECRALISKYEDTRDLRMLGGYQPGADAALDRAIELAPRLYEALKQS 423

Query: 421 PSDLSSEDVFQEIT 434
           P    S D   EI 
Sbjct: 424 PHGEPSIDAIGEIA 437


>gi|319409191|emb|CBI82835.1| Flagellum-specific ATP synthase [Bartonella schoenbuchensis R1]
          Length = 509

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 223/435 (51%), Positives = 299/435 (68%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            L +     +D S  LV QGG IS +         LSQ V LGD V          G++I
Sbjct: 73  RLLSFVTHQDDPSSCLVNQGGVISDVARGTLVARGLSQSVLLGDTVCIDCDGQAVRGEII 132

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            +N + V I P        L   VF  G   ++P   WCGRV+NALG+ IDG  +L  G 
Sbjct: 133 HVNEENVLIKPYDETVVPVLMASVFPKGPLFVAPDRSWCGRVVNALGEAIDGKGALLSGP 192

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +M +   VPPA+ R RV+KG +TG++VIDIFTPLC GQRIG+FAGSG+GKSTLLSM  +
Sbjct: 193 RNMAVEGDVPPALKRARVKKGLRTGVKVIDIFTPLCFGQRIGIFAGSGVGKSTLLSMMMQ 252

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +D FD V+++L GERGREVR+ ++D L + L K V V+AT DESP++R++AP+ A TIAE
Sbjct: 253 ADHFDTVVLALTGERGREVRDMLDDTLHNKLDKVVAVIATGDESPMMRRLAPIMATTIAE 312

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YFSS GDNVLL++DS+TR+A ++REIA ++ E PV+RG+P  VFSELPRLLER G   + 
Sbjct: 313 YFSSLGDNVLLVVDSVTRYALAMREIAISAHEPPVSRGFPPRVFSELPRLLERAGSGREG 372

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT V +VLVDGD+HNDPI+D++R ILDGHIVL+R++A +GR+P VD  AS+SRLA  
Sbjct: 373 KGSITGVYAVLVDGDDHNDPISDAIRGILDGHIVLDRAIAAQGRFPAVDIPASISRLAPH 432

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +W+ +++ LV +L  +I R+EETRD+R +G YR G D +LD+A+  VP IY  +KQSP  
Sbjct: 433 SWTDEQRILVQNLKEMIFRYEETRDLRAMGAYRAGTDQVLDQAIFLVPSIYAAMKQSPDM 492

Query: 424 LSSEDVFQEITKKLQ 438
               D + E+ K L+
Sbjct: 493 PLVHDPYDELAKLLK 507


>gi|114571343|ref|YP_758023.1| F0F1 ATP synthase subunit alpha [Maricaulis maris MCS10]
 gi|122315069|sp|Q0AKV8|ATPA_MARMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114341805|gb|ABI67085.1| ATP synthase F1 subcomplex alpha subunit [Maricaulis maris MCS10]
          Length = 510

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 110/447 (24%), Positives = 187/447 (41%), Gaps = 26/447 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V   G + S+      V  L + V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNYGAEAKVSDVGSVLSVGDGIARVYGLDE-VKAGELVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V     G    I  GD V   G     S      GRV++ LG+PID
Sbjct: 59  --IKGMALNLERDNVGCVIFGDDRGIKEGDTVKRLGSIVDTSVGKGLLGRVVDGLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L        +  K P  + R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLKGVAERRRVDVKAPGIIPRKSVHEPMATGIKAIDAMIPVGRGQRELIIGDRQTGK 176

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T+L+  A ++  D       I   VG++   V + ++    +     +++V AT
Sbjct: 177 TAIALDTILNQKAINEGDDESAKLYCIYVAVGQKRSTVAQIVKTLEENGALDYTIIVAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP TA  +AEYF   G + L++ D +++ A + R+++      P    YP
Sbjct: 237 ASDPAPMQFLAPFTACAMAEYFRDNGMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     +    G++TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERAAKLNEANGSGSMTALPIIETQANDVSAYIPTNVISITDGQIFLETD 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   K++   +   + ++ E   +     +   +D 
Sbjct: 357 LFYQGIRPAVNVGLSVSRVGSAAQTKAMKQVAGKMKGELAQYRE---MAAFAQFGSDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ      S +
Sbjct: 414 ATQKLLNRGQRLTELLKQPQFSPLSME 440


>gi|150390484|ref|YP_001320533.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens
           QYMF]
 gi|149950346|gb|ABR48874.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens
           QYMF]
          Length = 436

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 162/426 (38%), Positives = 243/426 (57%), Gaps = 14/426 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQVIRINLDIVYICP 74
           +LV   G +S +     T+  +   V +G+       +G N   L + +      V + P
Sbjct: 17  DLVKYTGRVSQVIG--LTIEAIGPAVKIGEVCKIFPLKGAN-PILAEAVGFREKKVLLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I  G  V   G    I+      GR+++ LG PIDG   +     +   M    
Sbjct: 74  LGEMEGIGPGSKVEATGSTLSINVGEALLGRILDGLGNPIDGKGPIEAH-TAYPAMGSPV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ +++    G++ ID      +GQRIG+FAGSG+GKSTLL M AR+   D  +I+
Sbjct: 133 NPLLRKTIKEPLSLGVKAIDGLLSCGNGQRIGIFAGSGVGKSTLLGMIARNTRADINVIA 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI +D   + LK+SVV+VATSD+  ++R    L A ++AEYF     NV
Sbjct: 193 LIGERGREVKEFIEKDLKEEGLKRSVVIVATSDQPALIRMKGALLATSVAEYFRDHNKNV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           +L++DS+TRF+ + RE+    GE PV +GY  SVF+ LP+LLER G S+K  G IT + +
Sbjct: 253 MLLMDSLTRFSMAQREVGLAIGEPPVTKGYTPSVFAILPKLLERSGTSDK--GAITGLYT 310

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PIAD+VR ILDGHIVL+R +A    YP +D LASVSR+ D     +  KL
Sbjct: 311 VLVDGDDMNEPIADAVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVMDSIVGKEHIKL 370

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            + L  ++  + +  D+  IG Y  G +  +D+A+ ++  + +FL Q+  +      FQE
Sbjct: 371 ANELKEILSTYNDAEDLINIGAYVKGSNPKIDRAIEKIDAVNEFLIQTTDEKI---TFQE 427

Query: 433 ITKKLQ 438
               ++
Sbjct: 428 SVDIMK 433


>gi|90422599|ref|YP_530969.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB18]
 gi|90104613|gb|ABD86650.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18]
          Length = 443

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 223/438 (50%), Positives = 302/438 (68%), Gaps = 2/438 (0%)

Query: 3   KNLETLAQ--LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
             LE L    +A       V  GG +S +T  YY V  LS+YV LG+ +     N   LG
Sbjct: 2   NALERLESTLVALRQDVPTVRLGGVVSEVTPTYYRVAGLSRYVRLGELIGLDVDNQIQLG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI+   V   P        LG + +      +SP   W GRV+NALG+P+D    L 
Sbjct: 62  EVVRIDGTGVTAKPFDSHVAAGLGLVAYRLPPKTLSPHPSWKGRVVNALGEPLDDAGVLQ 121

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G+  M   +  PPAM+R RV+    TG+RV+D+FTPLC GQRIG+FAGSG+GK+TLLSM
Sbjct: 122 AGERVMSTDANPPPAMSRTRVQAPLHTGVRVVDLFTPLCIGQRIGIFAGSGVGKTTLLSM 181

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            A+S  FD V+ +LVGERGREVREF+E+ L  +  +++ VV+TSDESP++R++A  TA T
Sbjct: 182 LAQSSGFDTVVTALVGERGREVREFLEEALVHHRSRAITVVSTSDESPMMRRLAAKTATT 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G++VLLI+DS+TRFAH+ RE+A  +GE  +ARGY  SVFSELPRLLER GP 
Sbjct: 242 IAEYFRDRGESVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSELPRLLERSGPG 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+IT + +VLVDGD+HN+P+AD+VRS LDGHIVL+R +A++GRYP ++ LASVSRL
Sbjct: 302 LDGQGSITGIFAVLVDGDDHNEPVADTVRSTLDGHIVLDREVADQGRYPAINVLASVSRL 361

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   WS +E+ LV  L  +I RFE+TRD+RL+GGY+PG D  LD+AV  VP IY+ ++Q+
Sbjct: 362 AQHVWSPEERNLVRKLRAMIARFEDTRDLRLMGGYQPGRDNELDQAVQLVPKIYEVMQQA 421

Query: 421 PSDLSSEDVFQEITKKLQ 438
           PSD +  + FQE+   ++
Sbjct: 422 PSDPACGEPFQELLAVIK 439


>gi|302389661|ref|YP_003825482.1| type III secretion system ATPase, FliI/YscN [Thermosediminibacter
           oceani DSM 16646]
 gi|302200289|gb|ADL07859.1| type III secretion system ATPase, FliI/YscN [Thermosediminibacter
           oceani DSM 16646]
          Length = 439

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 165/425 (38%), Positives = 243/425 (57%), Gaps = 12/425 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPV 75
           + +   G IS I     T+        +G+    +        L +V+    D + + P+
Sbjct: 17  DTLKPRGKISKIVG--LTIESKGPPAEIGEICRIKASREPKKLLAEVVGFRDDTLILMPL 74

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  E I  GD V   G+   +       GR+++ LG PIDG   + K  +   + +  P 
Sbjct: 75  GDMEGIGPGDEVEATGKKLTVPVGEQLLGRILDGLGTPIDGKGPV-KSHIHYPLFNSPPN 133

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R  +      GI+VID       GQR+G+FAGSG+GKSTLL M AR+   D  +I+L
Sbjct: 134 PVERAPITSPLPLGIKVIDTLLTCGRGQRVGIFAGSGVGKSTLLGMIARNTKADVNVIAL 193

Query: 195 VGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGRE+  F+  D   + LK+SVVVVATSD+SP++R  A  TA  IAEYF  +G +V+
Sbjct: 194 IGERGRELNSFLMKDLGEEGLKRSVVVVATSDKSPLIRTKAAFTATAIAEYFRDQGLDVM 253

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + RE+   +GE PV +GY  SVF+ LP+LLER G S    G+IT + +V
Sbjct: 254 LMMDSVTRFAMAQREVGLAAGEPPVTKGYTPSVFAILPKLLERAGTSS--AGSITGIYTV 311

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+ N+PI+D+VR ILDGHIVL+R+LA    YP +D LAS+SRL +   S + +KL 
Sbjct: 312 LVEGDDLNEPISDTVRGILDGHIVLSRTLANRNHYPAIDVLASISRLMNDVISDEHRKLA 371

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           + +  LI  + E  D+  IG Y  G +  +D+A+  +  I +FL Q   +      ++E 
Sbjct: 372 AKVKSLISIYNEAEDLINIGAYVRGSNPKIDEALKYIDDIRNFLVQEVDEKVD---YEEA 428

Query: 434 TKKLQ 438
              L+
Sbjct: 429 LANLK 433


>gi|218290063|ref|ZP_03494230.1| ATP synthase F1, alpha subunit [Alicyclobacillus acidocaldarius
           LAA1]
 gi|258512718|ref|YP_003186152.1| ATP synthase F1, alpha subunit [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|218239897|gb|EED07085.1| ATP synthase F1, alpha subunit [Alicyclobacillus acidocaldarius
           LAA1]
 gi|257479444|gb|ACV59763.1| ATP synthase F1, alpha subunit [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 502

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 106/430 (24%), Positives = 180/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +  K  V   G + S+      +  L   V  G+ V  +   S   G  + 
Sbjct: 10  ALIKQQIEQFEVKAEVRDTGTVLSVGDGIARLYGL-DNVMAGELVEFE---SGVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G  + I  G+ V   GR   +       GRV+NALG+PID    +   +
Sbjct: 66  LEEDNVGVVVLGSVQGIREGEQVRRTGRLVTVPVGPQLLGRVVNALGQPIDNKGPIEATE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + S  P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 YR-PVESPAPGVIVRRSVHEPLETGIKAIDSMVPIGRGQRELIIGDRQTGKTAIALDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V + +E          + VVVA++ E   L  +AP     
Sbjct: 185 NQKGKDVKCIYVAIGQKQSTVAQVVETLRRYGAMEYTTVVVASASEPAPLLFLAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEY+   G + L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEYYLYNGQHALVVYDDLSKQAAAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++  +SVS
Sbjct: 305 NDEHGGGSLTALPFIETQAGDISAYIPTNVISITDGQIFLESDLFFAGVRPAINVGSSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + ++ E +       +   +D      + +   + + LK
Sbjct: 365 RVGSAAQTKAMKKVAGTLKLDLAQYRELQ---AFTQFGSDLDKATQDTLRRGERMTELLK 421

Query: 419 QSPSDLSSED 428
           Q      + D
Sbjct: 422 QPQYHPLTFD 431


>gi|307182073|gb|EFN69452.1| ATP synthase subunit alpha, mitochondrial [Camponotus floridanus]
          Length = 679

 Score =  335 bits (859), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 99/428 (23%), Positives = 183/428 (42%), Gaps = 22/428 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G    I
Sbjct: 65  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDRHI 120

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   L    L   I +K P  + R  
Sbjct: 121 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPLN-NKLRFRIGTKAPGIIPRVS 179

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  +       
Sbjct: 180 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAGEEKKKLYC 239

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +  +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 240 IYVAIGQKRSTVAQIVKRLTDSGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 299

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 300 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNENLGGGSL 359

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 360 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 419

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ        
Sbjct: 420 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYGKRLR 476

Query: 428 DVFQEITK 435
           D   ++ +
Sbjct: 477 DSSNQLRQ 484


>gi|300024617|ref|YP_003757228.1| ATPase, FliI/YscN family [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526438|gb|ADJ24907.1| ATPase, FliI/YscN family [Hyphomicrobium denitrificans ATCC 51888]
          Length = 456

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 215/418 (51%), Positives = 282/418 (67%), Gaps = 1/418 (0%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G ++ I+  Y  VT LS++V +GD V   G     L +V  I   ++ + P      
Sbjct: 28  RISGRVARISPTYIVVTGLSKFVSIGDAVSIAGIGGSVLAEVASIEAQVINVTPFIADHR 87

Query: 81  ISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I LG  V    G+  +SP   W GR +NALG PID    L  GD ++ I    P AM R 
Sbjct: 88  IELGASVTALSGQLTLSPHESWLGRTLNALGHPIDDQGPLIAGDRAVPIQGSPPAAMRRS 147

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +  KTG++ ID+FTP+C GQRIG+FAGSG+GKSTLL+M +R+   D  +++LVGER 
Sbjct: 148 RLGEQLKTGVKAIDLFTPICAGQRIGIFAGSGVGKSTLLAMLSRAPSSDVTVLALVGERS 207

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REVR+F++D L  +  + V VVATSDESP++R++AP  A+ IAEY+  +G NVLLI+DS+
Sbjct: 208 REVRDFLDDTLSASRDRVVSVVATSDESPMMRRLAPAAAMCIAEYYRDQGKNVLLIIDSL 267

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+AH++RE+A  S E PVARGYP SVFS LPRLLER G  E+  G ITAV+SVLVDGD+
Sbjct: 268 TRYAHAMRELALASDEPPVARGYPPSVFSALPRLLERAGTGEEGAGTITAVLSVLVDGDD 327

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HNDPIAD+ R ILDGHIVL RS+A +GR P VDPLAS+SRLA K  +  + +  + L   
Sbjct: 328 HNDPIADAARGILDGHIVLERSIASQGRLPAVDPLASLSRLAPKIRTKQQSQFTTQLIES 387

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           I RFE+TRD+R IGGYRPG DL LD+A+  VP +YD LKQ  ++   EDVF  + + L
Sbjct: 388 ISRFEDTRDLRAIGGYRPGSDLTLDRALETVPRVYDALKQDLNETPVEDVFAFLAQTL 445


>gi|77964179|gb|ABB13424.1| ATP synthase subunit alpha [Clostridium paradoxum]
          Length = 504

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 183/431 (42%), Gaps = 19/431 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K    +      G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSIIKEQIKRYESKIELKDVGTVIQVGDGIARIHGLEK-CMAGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EIYGMALNLEEDFVGAVLLGSDENIKEGDTVKRTGRIVEVPVGDALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    I ++ P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KADKFRPIETQAPGIIERKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +++      +        I   +G++   V + ++          ++VV AT+ E   L+
Sbjct: 176 TSIAIDTIINQKGKDVICIYVAIGQKRSTVAQIVDRLEKYGAMDYTIVVSATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP +   + E F  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YMAPYSGCAMGEEFMHQGKHVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L     ++ E +       +   +D    + + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLGYAQYRELQ---AFAQFGSDLDKDTRERLAQ 412

Query: 410 VPIIYDFLKQS 420
              I + LKQ+
Sbjct: 413 GERIVEVLKQA 423


>gi|148558082|ref|YP_001257195.1| flagellum-specific ATP synthase [Brucella ovis ATCC 25840]
 gi|148369367|gb|ABQ62239.1| flagellum-specific ATP synthase [Brucella ovis ATCC 25840]
          Length = 453

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 218/437 (49%), Positives = 292/437 (66%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDMVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGY  SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYTPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|319405397|emb|CBI79016.1| Flagellum-specific ATP synthase [Bartonella sp. AR 15-3]
          Length = 509

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 219/436 (50%), Positives = 299/436 (68%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
             L   A+   D+  +LV QGG IS +         LSQ V LGD V  + +     G++
Sbjct: 72  NRLLDFAKRKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVCIECETQLLRGEI 131

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+N +   I P        L   VF  G   ++P   WCGR++NA G+ IDG   L  G
Sbjct: 132 IRVNEESALIKPYDETVVPILAASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGVLSSG 191

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             +M I +  PPA+ R RV  G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM  
Sbjct: 192 PRNMAIEAYAPPALKRARVGAGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMM 251

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           ++D FD V+++L GERGREVR+ ++D + D L K + V+AT DESP++R++AP+ A TIA
Sbjct: 252 QADHFDTVVLALTGERGREVRDMLDDIVQDKLHKLIGVIATGDESPMMRRLAPIMATTIA 311

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYFSS GDNVLL++DSITR+A + REIA  + E PV+RG+P  VFSEL RLLER GP  +
Sbjct: 312 EYFSSLGDNVLLVVDSITRYALAAREIAITAHEPPVSRGFPPRVFSELSRLLERAGPGRE 371

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA 
Sbjct: 372 RKGSITGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLAS 431

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            +W+ ++  LV +L  +I R+EETRD+R +G YRPG+D +LD+AV  VP +Y  +KQ+P 
Sbjct: 432 HSWTPEQCTLVKNLKEMIFRYEETRDLRAMGAYRPGIDHVLDQAVFLVPSVYTAIKQNPD 491

Query: 423 DLSSEDVFQEITKKLQ 438
                D ++E+ + L+
Sbjct: 492 MPLIIDPYEELARLLK 507


>gi|153011529|ref|YP_001372743.1| flagellum-specific ATP synthase [Ochrobactrum anthropi ATCC 49188]
 gi|151563417|gb|ABS16914.1| ATPase, FliI/YscN family [Ochrobactrum anthropi ATCC 49188]
          Length = 452

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 220/436 (50%), Positives = 292/436 (66%), Gaps = 1/436 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            L   A+      K L   GG +S ++     V  LS+   LGD V    +   +L ++I
Sbjct: 9   RLAAFARQQSVAPKPLTGIGGTVSDVSRSAIAVRGLSRDAHLGDAVAIHAQGGQSLAEII 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           R+    V + P       SLG  VF  G  RI P+  W GRVINALG+ +DG  +L  G 
Sbjct: 69  RVADTQVLVKPFDDRIIPSLGAAVFEEGPMRIRPALEWRGRVINALGEAVDGKGALQPGT 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  R
Sbjct: 129 RPMASESLAPAALRRGRVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTR 188

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAE
Sbjct: 189 AADFDTVVLALTGERGREVREMLEETMAGHLDKTITVVATGDESPMMRRLAPNTATAIAE 248

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF   G NVLLI+DS+TRFAH+ RE+A  + E PV+RGYP SVFS+LPRLLER GP   E
Sbjct: 249 YFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVSRGYPPSVFSQLPRLLERAGPGITE 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD   SVSRLA 
Sbjct: 309 AGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPGSVSRLAK 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             W+ +++KLVS L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IYD L+QSP 
Sbjct: 369 HNWTPEQRKLVSQLRGMVARFEETRDLRAIGAYQKGHDGLLDQAVDLVPRIYDALQQSPE 428

Query: 423 DLSSEDVFQEITKKLQ 438
              S+D + ++   L+
Sbjct: 429 TGLSDDPYNDLAAALR 444


>gi|158430150|pdb|2QE7|A Chain A, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430151|pdb|2QE7|B Chain B, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430152|pdb|2QE7|C Chain C, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|33329385|gb|AAQ10088.1| ATP synthase subunit alpha [Bacillus sp. TA2.A1]
          Length = 502

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 182/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N      VV+ G +  +      V  L + V  G+ +  +   
Sbjct: 1   MSIRPEEISALIKKQIENYEADLEVVEVGTVIQVGDGIARVHGLEK-VMAGELLEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +  D V +  +G   EI  G  V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VMGMAQNLEEDNVGVVILGPYTEIREGTQVKRTGRIMEVPVGEALLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GRGPIETAEYR-PIESPAPGVMDRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           +T+      +        I   +G++   V   +E     D L  ++VV A++ E   L 
Sbjct: 176 TTIAIDTIINQKGQDVICIYVAIGQKQSTVAGVVETLRQHDALDYTIVVTASASEPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFMYKGKHALVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      EK  G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDEKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+  +L   + ++ E +       +   +D      +++
Sbjct: 356 AVNVGISVSRVGGAAQIKAMKKVAGTLRLDLAQYRELQ---AFAQFGSDLDKATQAKLNR 412

Query: 410 VPIIYDFLKQSPS 422
                + LKQ   
Sbjct: 413 GERTVEILKQDEH 425


>gi|329923654|ref|ZP_08279079.1| ATP synthase F1, alpha subunit [Paenibacillus sp. HGF5]
 gi|328941131|gb|EGG37431.1| ATP synthase F1, alpha subunit [Paenibacillus sp. HGF5]
          Length = 507

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 186/426 (43%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+ E  S   V + G +  ++     V  L +    G+ +  Q       G  + +   
Sbjct: 17  SQIEEYKSDITVSEVGTVIQVSDGIARVYGL-ENAMSGELLEFQNG---VFGLALNLEES 72

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G   EI  GD V   GR   +       GRV+N LG+P+DG   + +      
Sbjct: 73  NVGVVILGPYSEIKEGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLDGKGPI-EATAFRP 131

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSD 185
           + S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  +  
Sbjct: 132 VESSAPGVIDRKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGKTTVAIDTILNQKG 191

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              K I   +G++   V + +E        + ++VV A++ E   L+ +AP     + EY
Sbjct: 192 SGVKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPAPLQYIAPYAGCAMGEY 251

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F  KG++ L+I D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 252 FMYKGEHALIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDEL 311

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++   SVSR+  
Sbjct: 312 GGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESELFYSGQRPAINVGISVSRVGG 371

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+   +   + ++ E +       +   +D      +++   + + LKQ  +
Sbjct: 372 SAQIKAMKKVAGGMKLDLAQYRELQ---AFSQFGSDLDKSTLARLNRGARLMEILKQGVN 428

Query: 423 DLSSED 428
              S +
Sbjct: 429 QPLSVE 434


>gi|254699440|ref|ZP_05161268.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513]
 gi|256014919|ref|YP_003104928.1| flagellum-specific ATP synthase FliI [Brucella microti CCM 4915]
 gi|256059628|ref|ZP_05449825.1| flagellum-specific ATP synthase [Brucella neotomae 5K33]
 gi|256111962|ref|ZP_05452913.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str.
           Ether]
 gi|261323598|ref|ZP_05962795.1| flagellum-specific ATP synthase [Brucella neotomae 5K33]
 gi|261749891|ref|ZP_05993600.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513]
 gi|265993411|ref|ZP_06105968.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str.
           Ether]
 gi|255997579|gb|ACU49266.1| flagellum-specific ATP synthase FliI [Brucella microti CCM 4915]
 gi|261299578|gb|EEY03075.1| flagellum-specific ATP synthase [Brucella neotomae 5K33]
 gi|261739644|gb|EEY27570.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513]
 gi|262764281|gb|EEZ10313.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 453

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 219/437 (50%), Positives = 293/437 (67%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|310659042|ref|YP_003936763.1| flagellum-specific ATP synthase [Clostridium sticklandii DSM 519]
 gi|308825820|emb|CBH21858.1| flagellum-specific ATP synthase [Clostridium sticklandii]
          Length = 436

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 167/439 (38%), Positives = 251/439 (57%), Gaps = 15/439 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDN 58
           ++K  + L ++      +L    G +S +     T+      V LG+             
Sbjct: 5   LKKYHDRLNEI------SLYQYKGKVSRVIG--LTIESRGPAVRLGETCHIYPIKSKEPV 56

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           L +V+    D V + P+G  E I  G +V   G    +       GR+++ +G PID  +
Sbjct: 57  LAEVVGFKEDTVLLMPLGEMEGIGPGSMVVATGNTLEVDVGEQLLGRILDGMGNPIDDFE 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                + S  + ++ P  ++R ++ +    G++ ID F     GQRIG+FAGSG+GKSTL
Sbjct: 117 P-PSLNYSYPVNNQPPNPLSRTKISEPLPLGVKAIDGFLTCGRGQRIGIFAGSGVGKSTL 175

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREV+EFI  D   + LKKSVV+V TSD+ P++R    L
Sbjct: 176 LGMIARNTLADINVIALIGERGREVKEFIDNDLEEEGLKKSVVIVVTSDQPPLVRMKGAL 235

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF   G NV+L++DS+TRF+ + RE+    GE PV +GY  SVF+ LP+LLER
Sbjct: 236 LATSIAEYFRDCGKNVVLMMDSLTRFSMAQREVGLAIGEPPVTKGYTPSVFAVLPKLLER 295

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S K  G+IT + +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D LAS
Sbjct: 296 AGNSSK--GSITGLYTVLVDGDDMNEPIADAVRGILDGHIVLSRNLANKNHYPAIDILAS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+       +   +V  +  L+  + ++ D+  IG Y  G +  +D A+ ++ II +F
Sbjct: 354 VSRVMPNIVDKEHIDIVGRIKDLMATYRDSEDLINIGAYIKGTNKKVDMAIEKIEIINEF 413

Query: 417 LKQSPSDLSSEDVFQEITK 435
           L+Q   D  + D   E+ +
Sbjct: 414 LRQGIHDRLTFDEIVELLR 432


>gi|163844324|ref|YP_001621979.1| flagellum-specific ATP synthase [Brucella suis ATCC 23445]
 gi|163675047|gb|ABY39157.1| ATPase FliI/YscN family [Brucella suis ATCC 23445]
          Length = 453

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 219/437 (50%), Positives = 293/437 (67%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EGGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|148269842|ref|YP_001244302.1| flagellar protein export ATPase FliI [Thermotoga petrophila RKU-1]
 gi|147735386|gb|ABQ46726.1| type III secretion system ATPase, FliI/YscN [Thermotoga petrophila
           RKU-1]
          Length = 427

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 166/418 (39%), Positives = 247/418 (59%), Gaps = 12/418 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQVIRINLDIVYICPVGIGEEI 81
            G ++ +     TV        LG+      +N  + L +V+    + V + P      +
Sbjct: 10  NGRVTRVVG--LTVESKGPDAFLGEMCKISLQNGKNALAEVVGFREESVILMPYEDVSGL 67

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +   V    +   +  S    GRV + LG+PIDG   +   +    + +  P  + R+R
Sbjct: 68  KMSCEVIRTNKVLEVGVSRKMIGRVFDGLGRPIDGKPFVP--EDRYPLTNNPPNPLKRRR 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           ++     GIR ID    +  GQRIG+FAGSG+GKSTLL M AR+   D  +++L+GERGR
Sbjct: 126 IKDPLPVGIRSIDGLITVGKGQRIGIFAGSGVGKSTLLGMIARNTTADVNVLALIGERGR 185

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFI  D   + LK+S++VV+TSD+  + R  + LTA +IAE+F   G +VLL++DS+
Sbjct: 186 EVREFIERDLGEEGLKRSILVVSTSDQPALARVKSLLTATSIAEFFRDLGYDVLLMVDSL 245

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + RE+    GE P  RGYP SVF+ LP++LER G S+K  G+ITA+ +VLV+ D+
Sbjct: 246 TRWAMAQREVGLAVGEPPTTRGYPPSVFAGLPKILERAGNSDK--GSITAIYTVLVEADD 303

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PI+D+VRSI+DGHI+L+R LAE   YP VD LASVSRL +   + + ++  + L  L
Sbjct: 304 FNEPISDTVRSIVDGHIILSRRLAESNHYPAVDVLASVSRLMNDIVTEEHREAANRLRSL 363

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +  +E  +D+  IG Y+ G + ++DKAV     I  FLKQ   + SS   F+E  +KL
Sbjct: 364 MSAYESAKDLIEIGAYKSGTNPLVDKAVEMKDEIDSFLKQGVFEKSS---FEETLQKL 418


>gi|261409679|ref|YP_003245920.1| ATP synthase F1 subunit alpha [Paenibacillus sp. Y412MC10]
 gi|261286142|gb|ACX68113.1| ATP synthase F1, alpha subunit [Paenibacillus sp. Y412MC10]
          Length = 504

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 105/439 (23%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +       V + G +  ++     V  L +    G+ +  Q   
Sbjct: 1   MSIRPEEISTLIKSQIEEYKSDITVSEVGTVIQVSDGIARVYGL-ENAMSGELLEFQNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +    V +  +G   EI  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VFGLALNLEESNVGVVILGPYSEIKEGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +      + S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-EATAFRPVESSAPGVIDRKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +T+   ++  +     K I   +G++   V + +E        + ++VV A++ E   L+
Sbjct: 176 TTVAIDTILNQKGSGVKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG++ L+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFMYKGEHALIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLNDELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESELFYSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   +   + ++ E +       +   +D      +++
Sbjct: 356 AINVGISVSRVGGSAQIKAMKKVAGGMKLDLAQYRELQ---AFSQFGSDLDKSTLARLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ  +   S +
Sbjct: 413 GARLMEILKQGVNQPLSVE 431


>gi|315649872|ref|ZP_07902954.1| ATP synthase F1, alpha subunit [Paenibacillus vortex V453]
 gi|315274671|gb|EFU38053.1| ATP synthase F1, alpha subunit [Paenibacillus vortex V453]
          Length = 504

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 105/439 (23%), Positives = 187/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +       V + G +  ++     V  L +    G+ +  Q   
Sbjct: 1   MSIRPEEISTLIKSQIEEYKSDITVSEVGTVIQVSDGIARVYGL-ENAMSGELLEFQNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +    V +  +G   EI  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VFGLALNLEESNVGVVILGPYSEIKEGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        + S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIEAAAFR-PVESSAPGVIDRKSVHEPMQTGIKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +T+   ++  +     K I   +G++   V + +E        + ++VV A++ E   L+
Sbjct: 176 TTVAIDTILNQKGSGVKCIYVAIGQKQSTVAQVVETLRRHGALEYTIVVTASASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG++ L+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFMYKGEHALIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLSDELGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESELFYSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   +   + ++ E +       +   +D      +++
Sbjct: 356 AINVGISVSRVGGSAQIKAMKKVAGGMKLDLAQYRELQ---AFSQFGSDLDKSTLARLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ  +   S +
Sbjct: 413 GARLMEILKQGVNQPLSVE 431


>gi|258592502|emb|CBE68811.1| flagellum-specific ATP synthase [NC10 bacterium 'Dutch sediment']
          Length = 479

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 170/419 (40%), Positives = 240/419 (57%), Gaps = 7/419 (1%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQVIRINLDIV 70
           A     NL+   G ++ +  +   +  + Q   +G+    +     D   +V+  + +I+
Sbjct: 13  ARMDKANLIRSLGKVTKVVGLV--IEAVGQEAFIGELCRIRSAGRHDVWAEVVGFHGEIL 70

Query: 71  YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            + P+G    I  G  V   GR F +       GRV+N LG+PIDG   + + +    + 
Sbjct: 71  LLMPLGEIHGIRPGSEVVAAGRPFEVPVGRSMLGRVVNGLGRPIDGKAPV-EVEARCSVH 129

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
            + P  M R  + +   TGIRVID       GQR+G+FAGSG+GKSTLL M AR    D 
Sbjct: 130 RQPPSPMTRAPIIEPLATGIRVIDGLLTCGKGQRVGIFAGSGVGKSTLLGMIARYTEADV 189

Query: 190 VIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +I+LVGERGREVREFI ++   D L++SVVVVATS+E  +LR+ A   A  IAEYF  +
Sbjct: 190 NVIALVGERGREVREFITKELGEDGLRRSVVVVATSNEPSLLRRQAAYVATAIAEYFRDQ 249

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL++DS+TRFA + REI  + GE P  RGYP S F+ LP LLER G +    G+IT
Sbjct: 250 GKHVLLMMDSLTRFALAQREIGLSVGEPPTTRGYPPSAFAMLPGLLERAG-TADHGGSIT 308

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + ++LV+GD+ N+P+AD  R+ILDGHIVL R LAE   YPPVD L SVSRL       +
Sbjct: 309 GLYTILVEGDDMNEPVADHARAILDGHIVLTRELAERNHYPPVDFLGSVSRLMSVVAPRE 368

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
            +   S L  L+    + +D+  IG Y  G +  +D+A+  +  I  FL+QS  + S  
Sbjct: 369 VRAAASKLRELLAAHRQAQDLINIGAYVSGSNPKVDEALRYMTPIEAFLRQSSDERSDF 427


>gi|170744542|ref|YP_001773197.1| flagellum-specific ATP synthase [Methylobacterium sp. 4-46]
 gi|168198816|gb|ACA20763.1| ATPase, FliI/YscN family [Methylobacterium sp. 4-46]
          Length = 441

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 199/423 (47%), Positives = 288/423 (68%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S  +V  GG +  +T+    V  ++ +V LGD +  +      + +V+R++     + P 
Sbjct: 18  SLPVVRVGGPVREVTASACRVAGVAPFVRLGDRMGIEADGRVQIAEVVRVDAAGATLKPF 77

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               E  +G   F  G  R+ P+  W GRV++ALG+P+DG   L  G   + + +  P A
Sbjct: 78  EARIEAGIGTRAFRIGPARVRPAPSWKGRVLDALGRPLDGLGPLPPGPDLVPLDADPPAA 137

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R R+    +TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A +  FD V+++LV
Sbjct: 138 LGRARLRAPLRTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGARGFDSVVVALV 197

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGREVREF+E  L  +  ++ +VV+T DESP++R+ AP  A+ +AE    +G+ VLLI
Sbjct: 198 GERGREVREFLEGPLAASRGRAAIVVSTGDESPMMRRQAPRLAMAVAESLRDRGEAVLLI 257

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+AH+ R++A  +GE  VARG+P SVFS+LPRLLER GP +  +G+IT + SVLV
Sbjct: 258 VDSVTRYAHAARDVALAAGEPAVARGFPPSVFSDLPRLLERAGPGQDGRGSITGIFSVLV 317

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+HNDP+ADS+R  LDGH+VL+R +A++GRYP +D L S+SRL+D+ W+ +++ +V  
Sbjct: 318 DGDDHNDPVADSIRGTLDGHVVLDRGIADQGRYPAIDLLGSISRLSDQVWTPEQRDVVRR 377

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  +I RFEETRD+RL+GGYR G D  LD+AV  VP IY+ L+Q P    SED F E+ +
Sbjct: 378 LKGMIARFEETRDLRLMGGYRAGSDAELDQAVGLVPRIYESLRQEPGQPPSEDAFLELAQ 437

Query: 436 KLQ 438
            L+
Sbjct: 438 SLR 440


>gi|226315035|ref|YP_002774931.1| ATP synthase alpha chain [Brevibacillus brevis NBRC 100599]
 gi|254807681|sp|C0Z778|ATPA_BREBN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226097985|dbj|BAH46427.1| ATP synthase alpha chain [Brevibacillus brevis NBRC 100599]
          Length = 503

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 182/432 (42%), Gaps = 19/432 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             E ++ L ++   N      VV  G +  +      V  L +    G+ +  Q      
Sbjct: 5   RPEEISSLIKERIANFKSEIEVVDVGTVIQVGDGIARVHGLEK-AMQGELLEFQNG---V 60

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G V+ +  D V +  +G   +I  GD V   GR   +       GRV+N LG+PIDG  
Sbjct: 61  MGMVLNLEEDNVGVVIMGPFRDIKEGDTVKRTGRVMEVPVGEALLGRVVNPLGQPIDGQG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        I S  P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 121 PIANNGFR-PIESPAPGVMARKSVHEPLQTGIKAIDAMIPVGRGQRELIIGDRQTGKTAV 179

Query: 178 LSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +        I   +G++   V   +E        + +++V AT+ +   +  +A
Sbjct: 180 ALDTIINQKGKDMICIYVAIGQKQSTVANIVETLRKAGALEYTIIVSATASDPAPMLYLA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T VT+AEYF  KG +VL + D +++ A + RE++      P    YP  VF    RLL
Sbjct: 240 PYTGVTMAEYFMYKGGHVLCVYDDLSKQAAAYREMSLLLRRPPGREAYPGDVFYLHSRLL 299

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+
Sbjct: 300 ERAAKLSDDLGAGSITALPFIETQAGDISAYIPTNVISITDGQIFLETDLFNAGQRPAVN 359

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+   L   + ++ E   +     +   +D      + +   
Sbjct: 360 TGLSVSRVGGSAQIKAMKKVAGPLKLELAQYRE---LAAFAQFGSDLDKATQARLTRGER 416

Query: 413 IYDFLKQSPSDL 424
           + + +KQ   D 
Sbjct: 417 LMEIMKQGQFDP 428


>gi|327399152|ref|YP_004340021.1| ATP synthase subunit alpha [Hippea maritima DSM 10411]
 gi|327181781|gb|AEA33962.1| ATP synthase subunit alpha [Hippea maritima DSM 10411]
          Length = 502

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 108/427 (25%), Positives = 187/427 (43%), Gaps = 20/427 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K +E   +  +      + + G + S+      V  LS  V   + V  +      +G
Sbjct: 12  IKKEIENAKEFID------ISETGTVLSVGDGIARVYGLS-NVMANELVQFENG---VIG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +  +G  ++I  GD V    R  ++       GRV+NALG+PIDG   +
Sbjct: 62  MALNLEEDNVGVVVLGDDKDIKEGDKVKRTKRISQVPVGKALVGRVVNALGEPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            + +    I  K P  + RQ V++  +TGI+ ID   P+  GQR  +     IGK+ +  
Sbjct: 122 -ESEHYRRIEVKAPGIVQRQSVKEPLQTGIKAIDAMIPIGRGQRELIIGDRQIGKTQIAL 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     I   VG++   V    +          + +V AT+ +   L+ +AP 
Sbjct: 181 DTIINQKDTDVYCIYVAVGQKRSTVARIWKKLEEMGAMEYTTIVAATASDPAPLQYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V + EYF   G + L+I D +T+ A + R+++      P    YP  VF    RLLER
Sbjct: 241 AGVAMGEYFRDNGMHALIIYDDLTKHAQAYRQVSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+  
Sbjct: 301 AAKLSDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEGDLFYGGIRPAVNAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   L   + ++ E   +     +   +D +  + +++   + 
Sbjct: 361 ISVSRVGGAAQIKAMKQVAGMLRLALAQYRE---LAAFAQFGSDLDKVTQQQLNRGARLT 417

Query: 415 DFLKQSP 421
           + LKQ P
Sbjct: 418 EILKQPP 424


>gi|158321582|ref|YP_001514089.1| ATP synthase F1, alpha subunit [Alkaliphilus oremlandii OhILAs]
 gi|166990352|sp|A8MJW1|ATPA_ALKOO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158141781|gb|ABW20093.1| ATP synthase F1, alpha subunit [Alkaliphilus oremlandii OhILAs]
          Length = 505

 Score =  333 bits (854), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 108/435 (24%), Positives = 181/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K       V   G +  +      +  L +    G+ +      
Sbjct: 1   MNLRPEEISSIIKEQIKRYENKLEVKDVGTVIQVGDGIARIHGLEK-CMAGELLEFPNA- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  D V    +G    I  GD+V   GR   +       GRV+NALG+PID
Sbjct: 59  --VYGMAQNLEEDNVGCVLLGSDATIREGDIVKRTGRIVEVPVGEALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D   E+    P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TDAYREVERVAPGIISRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   V +  +          +++V +T+DE   L+
Sbjct: 176 TALAIDTIINQKNTDVICIYVAIGQKKSTVAQIKDSLEKAGAMEYTIIVSSTADELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F  KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEEFMEKGKHVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDERGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L   + ++ E   +     +   +D    + + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLRLELAQYRE---LAAFAQFGSDLDKETQERLSQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ   D 
Sbjct: 413 GERILEILKQPQYDP 427


>gi|225685990|ref|YP_002733962.1| flagellum-specific ATP synthase [Brucella melitensis ATCC 23457]
 gi|256262884|ref|ZP_05465416.1| flagellum-specific ATP synthase [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642095|gb|ACO02008.1| ATPase FliI/YscN family protein [Brucella melitensis ATCC 23457]
 gi|263092721|gb|EEZ16930.1| flagellum-specific ATP synthase [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410316|gb|ADZ67380.1| flagellum-specific ATP synthase [Brucella melitensis M28]
 gi|326553609|gb|ADZ88248.1| flagellum-specific ATP synthase [Brucella melitensis M5-90]
          Length = 453

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 218/437 (49%), Positives = 293/437 (67%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL++  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAIMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|209965528|ref|YP_002298443.1| F0F1 ATP synthase subunit alpha [Rhodospirillum centenum SW]
 gi|209958994|gb|ACI99630.1| ATP synthase F1, alpha subunit [Rhodospirillum centenum SW]
          Length = 509

 Score =  333 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 181/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++ + +    N      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MEIRAAEISAILKQQIANFGTEADVAEVGTVLSVGDGVARVYGL-DNVKAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --VKGMALNLETDNVGVVIFGDDRDIKEGDTVKRTGAIVEVPVGRGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++   +  K P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQGAEMRR-VEVKAPGIIPRKSVHEPMQTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T ++    +   D       I   VG++   V + ++          S+VV AT
Sbjct: 176 TAVAIDTFINQKTINAGDDESKKLYCIYVAVGQKRSTVAQIVKTLEETGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T   + E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQFLAPYTGCAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +KG  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDKGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETG 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  S+   + +F E   +     +   +D 
Sbjct: 356 LFYRGIRPAINVGLSVSRVGSAAQIKAMKQVAGSIKLELAQFRE---MAAFAQFASDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 TTQRLLNRGARLTELLKQPQF 433


>gi|23015477|ref|ZP_00055252.1| COG0056: F0F1-type ATP synthase, alpha subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 509

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 108/427 (25%), Positives = 179/427 (41%), Gaps = 22/427 (5%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           Q+A   ++  V + G + S+      V  L + V  G+ V   G      G  + +  D 
Sbjct: 15  QIATFGTEAEVAEVGQVLSVGDGIARVHGLDK-VQAGEMVEFPGG---IKGMALNLETDN 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +   G    I  GD+V   G    +       GRV++ALG PIDG   +        +
Sbjct: 71  VGVVIFGDDRNIKEGDVVKRTGSIVDVPVGKGLLGRVVDALGNPIDGKGPIEAA-SRQRV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFAR 183
             K P  + R+ V +   TGI+ +D   P+  GQR  V      GK      T+++    
Sbjct: 130 DVKAPGIIPRKSVHEPMSTGIKAVDALIPIGRGQRELVIGDRQTGKTAILVDTIINQKRW 189

Query: 184 SDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
            D  D+      I   VG++   V + ++          ++VV AT+ E   L+ +AP  
Sbjct: 190 HDANDEKAKLFCIYVAVGQKRSTVAQIVKTLTDYGAMDYTIVVAATASEPAPLQFIAPYA 249

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
             T+ EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 250 GCTMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 309

Query: 298 GPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                  G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+   
Sbjct: 310 AKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETELFYKGIRPAVNVGL 369

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A     K++  S+   + ++ E   +     +   +D    K + +   + +
Sbjct: 370 SVSRVGSAAQIKAMKQVAGSIKLELAQYRE---MAAFAQFASDLDPATQKLLARGARLTE 426

Query: 416 FLKQSPS 422
            LKQ   
Sbjct: 427 LLKQPQF 433


>gi|291534220|emb|CBL07333.1| ATP synthase F1 subcomplex alpha subunit [Megamonas hypermegale
           ART12/1]
          Length = 504

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 189/439 (43%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + +D  KN      V   G +  I      +  L + +  G+ +      
Sbjct: 1   MKMNPEEITAIIKDQIKNYNVDLNVDDVGTVIEIGDGIAHIHGLDKAMS-GELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           +D  G V+ +  D V    +G   +I  GD+V   G+   +       GRV++ALG+PID
Sbjct: 57  NDIYGMVLNLEQDNVGAVLLGGDTKIKEGDIVKRTGKIMQVPVGESMIGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P   +R+ V++  +TGI+ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIHTT-QSRPIEYPAPGIADRKSVKEPLQTGIKAIDALVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      I     +G++   +   ++ +        ++VV AT+ +S  L+
Sbjct: 176 TAIAVDTILNQKGQNCICIYVAIGQKASTIARVVKTFEDHGAMDYTIVVAATASDSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP + VT+ E+F  +G +VL + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YMAPYSGVTMGEHFMYQGKHVLCVYDDLSKHATAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I+L       G  P
Sbjct: 296 RLLERAAKLSDELGGGSITALPIIETLAGDVSGYIPTNVISITDGQIMLQTEAFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     K++   +   + ++ E   +     +   +D    + + +
Sbjct: 356 AIDVGLSVSRVGGSAQIKAMKQIAGRMRLDLAQYRE---LAAFAQFGSDLDKSTKEQLDR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ+       D
Sbjct: 413 GVRMVETLKQAQYSPLKVD 431


>gi|83313240|ref|YP_423504.1| F0F1 ATP synthase subunit alpha [Magnetospirillum magneticum AMB-1]
 gi|115312250|sp|Q2VZN0|ATPA_MAGSA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|82948081|dbj|BAE52945.1| F0F1-type ATP synthase, alpha subunit [Magnetospirillum magneticum
           AMB-1]
          Length = 509

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 108/427 (25%), Positives = 179/427 (41%), Gaps = 22/427 (5%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           Q+A   ++  V + G + S+      V  L + V  G+ V   G      G  + +  D 
Sbjct: 15  QIATFGTEAEVAEVGQVLSVGDGIARVHGLDK-VQAGEMVEFPGG---IKGMALNLETDN 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +   G    I  GD+V   G    +       GRV++ALG PIDG   +        +
Sbjct: 71  VGVVIFGDDRNIKEGDVVKRTGSIVDVPVGKGLLGRVVDALGNPIDGKGPIEAA-SRQRV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFAR 183
             K P  + R+ V +   TGI+ +D   P+  GQR  V      GK      T+++    
Sbjct: 130 DVKAPGIIPRKSVHEPMSTGIKAVDALIPIGRGQRELVIGDRQTGKTAILVDTIINQKRW 189

Query: 184 SDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
            D  D+      I   VG++   V + ++          ++VV AT+ E   L+ +AP  
Sbjct: 190 HDANDEKAKLFCIYVAVGQKRSTVAQIVKTLTDYGAMDYTIVVAATASEPAPLQFIAPYA 249

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
             T+ EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 250 GCTMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 309

Query: 298 GPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                  G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+   
Sbjct: 310 AKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETELFYKGIRPAVNVGL 369

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A     K++  S+   + ++ E   +     +   +D    K + +   + +
Sbjct: 370 SVSRVGSAAQIKAMKQVAGSIKLELAQYRE---MAAFAQFASDLDPATQKLLARGARLTE 426

Query: 416 FLKQSPS 422
            LKQ   
Sbjct: 427 LLKQPQF 433


>gi|297183582|gb|ADI19709.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 511

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 109/445 (24%), Positives = 186/445 (41%), Gaps = 26/445 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   + ++ ++  K       V + G + S+      +  L   V  G+ V     +
Sbjct: 1   MEINPSEVTKILKEQIKKFGDKTEVTEVGKVLSVGDGIARIYGL-DNVQAGEMVEFADGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V   G            GRV++ LG PID
Sbjct: 60  K---GMALNLESDNVGVVIFGDDRNIKEGDTVKRTGSIVDAPVGKELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G D+L KG     +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKDALDKGLKRNRVEVKAPGIIPRQSVSEPVQTGLKAIDSLIPIGRGQRELIIGDRQTGK 176

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+++    +   D       I   +G++   V + ++          + +V AT
Sbjct: 177 TAVAIDTIINQKEINQSGDEKQKLYCIYVAIGQKRSTVAQIVKTLQDAGAMEYTTIVSAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP T  TI EYF   G + L+I D +++ A + R+++      P    YP
Sbjct: 237 ASDPAPLQFLAPYTGCTIGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERAAKLNDKNGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETE 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 357 LFNQGIRPAVNVGLSVSRVGSAAQTKAMKKVAGSIKLELAQYRE---MAAFAQFGSDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
              + +++   + + LKQ      S
Sbjct: 414 STQRLLNRGSKLTELLKQKQYSPMS 438


>gi|256043053|ref|ZP_05445998.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260564284|ref|ZP_05834769.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
 gi|265989490|ref|ZP_06102047.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260151927|gb|EEW87020.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
 gi|263000159|gb|EEZ12849.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 453

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 218/437 (49%), Positives = 292/437 (66%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQR G+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRTGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|150021149|ref|YP_001306503.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis
           BI429]
 gi|149793670|gb|ABR31118.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis
           BI429]
          Length = 434

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 177/427 (41%), Positives = 254/427 (59%), Gaps = 10/427 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            LE L +   +Y  N   + G +S I     T+        LG+      +   +  +V+
Sbjct: 3   RLELLKKRLSEY--NPYQKIGAVSKIVG--LTIESKGPDAFLGELCKIITEYKKSYAEVV 58

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
             N + V + P+     +  G  V    +   I  S    GRV++ALG+P+DG   L K 
Sbjct: 59  GFNENGVILMPLEDISGLKKGCQVIKTNQYVSIPVSEELLGRVVDALGRPLDGKKILSKE 118

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +   I+ + P  + R+R+      GIR ID F  L +GQRIG+FAGSG+GKSTLL M A
Sbjct: 119 KI--PIVREAPNPLIRKRITTPISVGIRAIDGFLTLGYGQRIGIFAGSGVGKSTLLGMIA 176

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +ISL+GERGREVREFI +D   + LK+S+VVV+TSD+  +LR  A LTA +I
Sbjct: 177 RNTSADINVISLIGERGREVREFIEKDLKKEGLKRSIVVVSTSDQPALLRVKALLTATSI 236

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  KG NVLL++DS+TR+A + RE+   +GE P  RGYP SVF+ LP++LER G S+
Sbjct: 237 AEYFRDKGYNVLLMVDSLTRWAMAQREVGLATGEPPTTRGYPPSVFAGLPKILERAGNSD 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+IT + +VLV+ D+ N+PI+D+VR I+DGHI+L+R LAE   YP +D L SVSRL 
Sbjct: 297 K--GSITGIYTVLVEADDFNEPISDTVRGIVDGHIILSRKLAESAHYPAIDVLMSVSRLM 354

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +   + + K     L  LI  + + +D+  +G Y+ G +  +DK++  +  I  FLKQS 
Sbjct: 355 NDIVTKEHKISAMKLKDLIATYYDAKDLIDVGAYKKGTNPKIDKSIELIDEINKFLKQSI 414

Query: 422 SDLSSED 428
            +  S D
Sbjct: 415 DESMSFD 421


>gi|294853153|ref|ZP_06793825.1| flagellar protein export ATPase FliI [Brucella sp. NVSL 07-0026]
 gi|294818808|gb|EFG35808.1| flagellar protein export ATPase FliI [Brucella sp. NVSL 07-0026]
          Length = 453

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 218/437 (49%), Positives = 293/437 (67%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDG+IVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGYIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|220932523|ref|YP_002509431.1| flagellar protein export ATPase FliI [Halothermothrix orenii H 168]
 gi|219993833|gb|ACL70436.1| flagellar protein export ATPase FliI [Halothermothrix orenii H 168]
          Length = 437

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 164/433 (37%), Positives = 247/433 (57%), Gaps = 7/433 (1%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            +QL     +  V +  G+I+ +  +   +      V +G+  + +        +V+  +
Sbjct: 6   FSQLTSVVDRARVTRNYGHITRVVGLI--IESKGPEVSIGEICLIKNGKRSVKAEVVGFD 63

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V + P+G    I+ G  V   G +  +       G+V+N LG+PI     +  G   
Sbjct: 64  KDKVLLMPIGEMRGINPGARVVATGEKLTVKVGEGLLGQVLNGLGQPISSGLKMRHGFTE 123

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + +M++ P  + R+R+ +    GIR ID       GQR+G+FAGSG+GKSTLL M AR+ 
Sbjct: 124 VPVMAQPPDPLLRKRITEPLSLGIRSIDGLLTCGRGQRVGIFAGSGVGKSTLLGMAARNT 183

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I LVGERGREVR+FI  D   + LKKS+VVVATSD+  ++R  A   A  IAE+
Sbjct: 184 EADINVIGLVGERGREVRDFIERDLGPEGLKKSIVVVATSDKPALVRVKAAYVATAIAEF 243

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G NVLL++DS+TR A + RE+    GE P  RGYP SV++ELP+LLER G +  + 
Sbjct: 244 FRDQGKNVLLMMDSVTRVAMAFREVGLAVGEPPATRGYPPSVYAELPKLLERAGTN--QH 301

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA+ +VLV+GD+ N+P++D+VR ILDGHIVL+R LA    YP VD L SVSRL    
Sbjct: 302 GTITALYTVLVEGDDFNEPVSDTVRGILDGHIVLSRDLASRNHYPAVDVLESVSRLMPDI 361

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  +    +  ++  + E+ D+  IG Y+PG +  +D+A+  +  I  FL+Q     
Sbjct: 362 VDEEHLQAAGEVKKMLADYRESEDLINIGAYKPGSNPAIDRALENINDINTFLRQGIGQK 421

Query: 425 SSEDVFQEITKKL 437
           SS +    + K++
Sbjct: 422 SSFEETVTMLKQI 434


>gi|254720628|ref|ZP_05182439.1| flagellum-specific ATP synthase [Brucella sp. 83/13]
 gi|265985672|ref|ZP_06098407.1| flagellum-specific ATP synthase [Brucella sp. 83/13]
 gi|306837352|ref|ZP_07470231.1| ATPase FliI/YscN family [Brucella sp. NF 2653]
 gi|264664264|gb|EEZ34525.1| flagellum-specific ATP synthase [Brucella sp. 83/13]
 gi|306407544|gb|EFM63744.1| ATPase FliI/YscN family [Brucella sp. NF 2653]
          Length = 453

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 219/437 (50%), Positives = 293/437 (67%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALCRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMVGHLGKTITVVATGDESPVMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSIVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|306846297|ref|ZP_07478858.1| ATPase FliI/YscN family [Brucella sp. BO1]
 gi|306273292|gb|EFM55161.1| ATPase FliI/YscN family [Brucella sp. BO1]
          Length = 453

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 218/437 (49%), Positives = 292/437 (66%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQAIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD   SVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPVSVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|306820116|ref|ZP_07453764.1| flagellar protein export ATPase FliI [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551894|gb|EFM39837.1| flagellar protein export ATPase FliI [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 439

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 176/441 (39%), Positives = 257/441 (58%), Gaps = 15/441 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-- 58
           + K  E L+         LV   G +S +     T+  +   V +G+        SD   
Sbjct: 6   LSKYFERLS------DATLVQYKGRVSKVVG--LTIESIGPQVQVGEMCKIFPVKSDVPV 57

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
           + +V+    + V + P+G  + IS G  V   G    +       GRV++ LG+PID  +
Sbjct: 58  MAEVVGFTENAVLLMPLGDMQGISPGATVIASGNSHEVQVGDSLLGRVLDGLGQPIDDKE 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           SL     +  + +  P  ++R R+ +    G++VID       GQRIG+FAGSG+GKSTL
Sbjct: 118 SLN-VSRAYPVNNMPPNPLSRMRIREPLPLGVKVIDGMLTCGRGQRIGIFAGSGVGKSTL 176

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I L+GERGREV+EFI  D   + L +SVVVVATSD+  ++RK   L
Sbjct: 177 LGMIARNTVADINVIGLIGERGREVKEFIENDLKEEGLSRSVVVVATSDQPALVRKKGAL 236

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G NV+L++DS+TRF+ + RE+    GE PV +GYP SVF+ELPRLLER
Sbjct: 237 LATSIAEYFRDQGKNVILMMDSLTRFSMAQREVGLAIGEPPVTKGYPPSVFAELPRLLER 296

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D LAS
Sbjct: 297 SGNSDK--GSITALYTVLVDGDDMNEPIADTVRGILDGHIVLSRALANKNHYPAIDVLAS 354

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+     S +  K V  +  L+  ++++ D+  IG Y  G    +D A+ +   I +F
Sbjct: 355 VSRVMPSIISGEHMKKVGVMRDLLATYKDSEDLISIGAYVKGSSKKVDFAIEKNDEINNF 414

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           LKQ   D  +    +++  ++
Sbjct: 415 LKQGVHDKYTFSQIEDMIGQI 435


>gi|62317081|ref|YP_222934.1| flagellum-specific ATP synthase [Brucella abortus bv. 1 str. 9-941]
 gi|83269074|ref|YP_418365.1| flagellum-specific ATP synthase [Brucella melitensis biovar Abortus
           2308]
 gi|189022348|ref|YP_001932089.1| flagellum-specific ATP synthase [Brucella abortus S19]
 gi|237816643|ref|ZP_04595635.1| ATPase FliI/YscN family [Brucella abortus str. 2308 A]
 gi|254691430|ref|ZP_05154684.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870]
 gi|254695271|ref|ZP_05157099.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya]
 gi|254698370|ref|ZP_05160198.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731815|ref|ZP_05190393.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292]
 gi|256256616|ref|ZP_05462152.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68]
 gi|260544322|ref|ZP_05820143.1| flagellum-specific ATP synthase [Brucella abortus NCTC 8038]
 gi|260757048|ref|ZP_05869396.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870]
 gi|260759581|ref|ZP_05871929.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292]
 gi|260762825|ref|ZP_05875157.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882858|ref|ZP_05894472.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68]
 gi|261215637|ref|ZP_05929918.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya]
 gi|297249973|ref|ZP_06933674.1| flagellar protein export ATPase FliI [Brucella abortus bv. 5 str.
           B3196]
 gi|62197274|gb|AAX75573.1| flagellum-specific ATP synthase FliI [Brucella abortus bv. 1 str.
           9-941]
 gi|82939348|emb|CAJ12295.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region:Disease resistance protein:ATP/GTP-binding site
           motif A [Brucella melitensis biovar Abortus 2308]
 gi|189020922|gb|ACD73643.1| flagellum-specific ATP synthase [Brucella abortus S19]
 gi|237787456|gb|EEP61672.1| ATPase FliI/YscN family [Brucella abortus str. 2308 A]
 gi|260097593|gb|EEW81467.1| flagellum-specific ATP synthase [Brucella abortus NCTC 8038]
 gi|260669899|gb|EEX56839.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292]
 gi|260673246|gb|EEX60067.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677156|gb|EEX63977.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870]
 gi|260872386|gb|EEX79455.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68]
 gi|260917244|gb|EEX84105.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya]
 gi|297173842|gb|EFH33206.1| flagellar protein export ATPase FliI [Brucella abortus bv. 5 str.
           B3196]
          Length = 453

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 218/437 (49%), Positives = 292/437 (66%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+   D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKSHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|300024904|ref|YP_003757515.1| ATP synthase F1 subunit alpha [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526725|gb|ADJ25194.1| ATP synthase F1, alpha subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 509

 Score =  332 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 110/441 (24%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MEIRAAEISSILKDQIKNFGKEAEVSEIGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGDDRTIKEGDTVKRTGAIVEVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D  M +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KADKKMRVDVKAPGILPRKSVHEPMATGLKAIDSLIPIGRGQRELVIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T L+  + +   D       +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAVILDTFLNQKSLNAGNDEGAKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T  T+ EYF   G + ++  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFTGCTMGEYFRDNGMHAVIAYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER        GN   TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLGDASGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLESD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   K++   +   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQTKAMKQVAGKIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              K + +   + + LKQ   
Sbjct: 413 ATQKLLARGARLTELLKQPQF 433


>gi|161620215|ref|YP_001594101.1| flagellum-specific ATP synthase [Brucella canis ATCC 23365]
 gi|254702557|ref|ZP_05164385.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686]
 gi|260568535|ref|ZP_05839004.1| flagellum-specific ATP synthase [Brucella suis bv. 4 str. 40]
 gi|261753135|ref|ZP_05996844.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686]
 gi|161337026|gb|ABX63330.1| ATPase FliI/YscN family [Brucella canis ATCC 23365]
 gi|260155200|gb|EEW90281.1| flagellum-specific ATP synthase [Brucella suis bv. 4 str. 40]
 gi|261742888|gb|EEY30814.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686]
          Length = 453

 Score =  332 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 219/437 (50%), Positives = 293/437 (67%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKLG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|310659422|ref|YP_003937143.1| f1 sector of membrane-bound ATP synthase subunit alpha [Clostridium
           sticklandii DSM 519]
 gi|308826200|emb|CBH22238.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Clostridium sticklandii]
          Length = 504

 Score =  332 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 183/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ + +   K    +      G +  +      +  L +    G+ +  +G  
Sbjct: 1   MELRPEEISSIIKQQIKRYENKIDLQDVGTVIQVGDGIARIHGLEK-CMAGELLQFEG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D     + +  D V    +G  E I  GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -DVYAMALNLEEDFVGAVMLGSDENIKEGDTVKRTGRIVEVPVGNQLLGRVLNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I ++ P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TDTFRPIETQAPGIIERKSVHEPLQTGIKSIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        I   +G++   V + ++          ++VV AT+ E   L+
Sbjct: 176 TTIAIDTIINQKGKDVICIYVAIGQKRSTVAQIVDTLEKAGAMDYTIVVAATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P    ++ E+F  +G +VL + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YISPYAGCSMGEHFMHEGKHVLCVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      EKG  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDEKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  ++     ++ E +     G     +D    + + +
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTVKLAYAQYRELQSFAQFG---SDLDKDTRERLEK 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ  S
Sbjct: 413 GERIVEVLKQPES 425


>gi|46447304|ref|YP_008669.1| F0F1 ATP synthase subunit alpha [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|81626571|sp|Q6MAK5|ATPA_PARUW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|46400945|emb|CAF24394.1| probable H+-transporting ATP synthase (alpha chain, atpA)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 508

 Score =  332 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 112/435 (25%), Positives = 194/435 (44%), Gaps = 21/435 (4%)

Query: 1   MQKNLETLA----QLAEDYSKNLVV---QGGYISSITSVYYTVTCLSQYVCLGDFVVHQG 53
           M+ N E ++    Q  E Y ++L +     G +  +      V  L   V + + V    
Sbjct: 1   MRLNPEEVSWVIQQEIEKYHEDLSLKFESAGRVLYVGDGIARVWGLDD-VMMSELVEFPD 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
                LG V+ + +D V +  +G    I   D+V   G+   +       GRVINALG+P
Sbjct: 60  G---TLGIVLNLEIDNVGVIILGSDRNIREQDIVKRTGKIASVPVGEGMLGRVINALGQP 116

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG  ++   +    I S  P  + R+ V +  +TGI+ ID   P+  GQR  +      
Sbjct: 117 IDGKGAIETKEFRA-IESSAPGVVQRKPVNEPVQTGIKAIDSMIPIGRGQRELIIGDRQT 175

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
           GK+T++  ++  + +     I   +G++   + + ++     D +K +++V AT+ +   
Sbjct: 176 GKTTVILDTIINQKNTGVCCIYVAIGQKSSTIAQVVKILEEHDAMKYTIIVAATASDPAA 235

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +A  + E+F   G +V+   D +++ A + REIA      P    YP  +F  
Sbjct: 236 LQYVAPYSATALGEHFMYNGKHVICFYDDLSKHAQAYREIALLLRRPPGREAYPGDIFYL 295

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      E   G++TAV  +    ++    I  +V SI DG I L   L   G 
Sbjct: 296 HSRLLERSAKLSTELGGGSLTAVPVIETQANDVTTYIPTNVISITDGQIYLESDLFYAGV 355

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   S SR+  KA S   KK+ +SL   + ++ E   +     +   +D      +
Sbjct: 356 RPAINVGISASRVGGKAQSKAMKKVAASLRLDLAQYRE---LAAFAQFGSEMDKTTQAQL 412

Query: 408 HQVPIIYDFLKQSPS 422
            +   + + LKQ   
Sbjct: 413 VRGERMIEVLKQDKF 427


>gi|225628604|ref|ZP_03786638.1| ATPase FliI/YscN family protein [Brucella ceti str. Cudo]
 gi|254711395|ref|ZP_05173206.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94]
 gi|254711994|ref|ZP_05173805.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1]
 gi|254715064|ref|ZP_05176875.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1]
 gi|256029975|ref|ZP_05443589.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1]
 gi|256158140|ref|ZP_05456056.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1]
 gi|256252909|ref|ZP_05458445.1| flagellum-specific ATP synthase [Brucella ceti B1/94]
 gi|261216771|ref|ZP_05931052.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1]
 gi|261219998|ref|ZP_05934279.1| flagellum-specific ATP synthase [Brucella ceti B1/94]
 gi|261319001|ref|ZP_05958198.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94]
 gi|261319638|ref|ZP_05958835.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1]
 gi|265986996|ref|ZP_06099553.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1]
 gi|265996657|ref|ZP_06109214.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1]
 gi|225616450|gb|EEH13498.1| ATPase FliI/YscN family protein [Brucella ceti str. Cudo]
 gi|260918582|gb|EEX85235.1| flagellum-specific ATP synthase [Brucella ceti B1/94]
 gi|260921860|gb|EEX88428.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1]
 gi|261292328|gb|EEX95824.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1]
 gi|261298224|gb|EEY01721.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94]
 gi|262550954|gb|EEZ07115.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1]
 gi|264659193|gb|EEZ29454.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1]
          Length = 453

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 218/437 (49%), Positives = 293/437 (67%), Gaps = 2/437 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFE+TRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARFEKTRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 428

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 429 ETGLSDDPYNDLAAALR 445


>gi|332799176|ref|YP_004460675.1| flagellar protein export ATPase FliI [Tepidanaerobacter sp. Re1]
 gi|332696911|gb|AEE91368.1| flagellar protein export ATPase FliI [Tepidanaerobacter sp. Re1]
          Length = 442

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 165/424 (38%), Positives = 246/424 (58%), Gaps = 12/424 (2%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLDIVYICPVG 76
            +   G IS I     T+        LG+  + +   +      +V+    +IV + P+G
Sbjct: 19  TIKPKGRISKIVG--LTIESEGPPAELGEICIIKSPKNPKSIFSEVVGFRDEIVILMPLG 76

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E++  G  V   G+           GRV++ LG PID    L K  L   + +  P  
Sbjct: 77  DMEDLGPGWDVEATGKKMTTPVGDELLGRVLDGLGNPIDDKGPL-KAKLHYPVSNNPPNP 135

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  + +    G+R ID       GQR+G+FAGSG+GKSTLL M AR+   D  +I+LV
Sbjct: 136 VERPIISEPLPVGVRAIDALLTCGIGQRLGIFAGSGVGKSTLLGMIARNTKADVNVIALV 195

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGRE+  FI +D   + +K+SV+VVATSD+ P++R  A  TA  IAEYF  +G NVLL
Sbjct: 196 GERGRELNSFITKDLGEEGVKRSVIVVATSDKPPLVRTRAAFTATAIAEYFRDQGANVLL 255

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DSITRFA + RE+   +GE PV RGY  SV++ LP+LLER G S K  G+IT + +VL
Sbjct: 256 MMDSITRFAMAQREVGLAAGEPPVTRGYTPSVYATLPKLLERAGTSAK--GSITGIYTVL 313

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PI+D+VR ILDGHIVL+R LA +  YP +D +AS+SRL +   + + +KL  
Sbjct: 314 VDGDDLNEPISDAVRGILDGHIVLSRELANKNHYPAIDVMASISRLMNDIVTPNHRKLAG 373

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            + +++  ++E  D+  IG Y  G +  +D+++  +  I +FLKQ   +  +   F++  
Sbjct: 374 RVKNILSVYKEAEDLINIGAYVKGNNPQIDESIKYIDKIENFLKQEVEEKIN---FEQTI 430

Query: 435 KKLQ 438
             L+
Sbjct: 431 NALE 434


>gi|94495686|ref|ZP_01302266.1| ATP synthase alpha subunit [Sphingomonas sp. SKA58]
 gi|94425074|gb|EAT10095.1| ATP synthase alpha subunit [Sphingomonas sp. SKA58]
          Length = 509

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 107/447 (23%), Positives = 185/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   ++++ +D   N      V + G +  +      V  L   V  G+ V      
Sbjct: 1   MDINAAEISKVIKDQIANFGTEAQVSEVGSVLKVGDGIARVHGL-DNVQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD+V   G    +       GRV++ LG PID
Sbjct: 59  --VQGMALNLEADNVGVVIFGSDAEIKEGDVVKRTGTIVDVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQYTE-RKRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T ++    +   D       I   +G++   V + ++    +     S+VV AT
Sbjct: 176 TAVAIDTFINQKGINAGDDESKKLYCIYVAIGQKRSTVAQIVKQLEENGAMDYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T VT+ EYF   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGVTMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER        GN   TA+  +     + +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKMNDANGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ        +
Sbjct: 413 STQKLLNRGARLTELLKQPQFSPLPFE 439


>gi|313673549|ref|YP_004051660.1| ATP synthase f1 subcomplex alpha subunit [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940305|gb|ADR19497.1| ATP synthase F1 subcomplex alpha subunit [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 502

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 108/432 (25%), Positives = 180/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++  D  +N        + G + S       V  L   +  G+ V   G  
Sbjct: 1   MQIRAEEISKIIRDQIQNFEQKVQMEEIGTVLSAGDGIAKVYGLDNAMS-GELVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G V  +  D V I  +G  E I  GD+V   G+   +       GRV+N LG PID
Sbjct: 59  --VYGIVFNLEEDNVGIVVMGDYEHIKEGDVVKRTGKIASVPVGEALIGRVVNPLGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +  + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLNTTEYDV-IEKIAPGIIKRKPVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + ++     +        +   +G++   V   I+          +++V AT+ +   L+
Sbjct: 176 TAIVIDTIINQKGKGVICVYVAIGQKRSTVARIIDTLEKHGAMEYTIIVSATASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + LLI D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAPFAGCTMGEYFRDRGKHALLIYDDLSKQATAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDEFGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++   L   + ++ E   +     +   +D      +++
Sbjct: 356 AVNVGLSVSRVGGAAQIKAMKQVAGRLRLELAQYRE---LAAFAQFGSDLDAATQAQLNR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GEKLVELLKQGQ 424


>gi|296447448|ref|ZP_06889373.1| ATPase, FliI/YscN family [Methylosinus trichosporium OB3b]
 gi|296255068|gb|EFH02170.1| ATPase, FliI/YscN family [Methylosinus trichosporium OB3b]
          Length = 446

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 211/438 (48%), Positives = 293/438 (66%), Gaps = 3/438 (0%)

Query: 4   NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +L+ L +    + +N  L    G ++ + + +  V  LS +V LG+ V       + LGQ
Sbjct: 3   SLQRLREAVSRHQRNKDLARVSGLVTEVAASHCRVLGLSDFVELGECVRFGAPTDERLGQ 62

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+++  D   +        I L    F  G   I+P   W GRV++A G+P+D   ++ +
Sbjct: 63  VVKVAKDGAIVKCFDDRARIGLNTPAFRAGPIEIAPHPDWIGRVLDAFGRPVDDRGAVSR 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD S+++ +  P AM R RV    +TG++ +D FTP+C GQRIGVFAGSG+GKSTLL M 
Sbjct: 123 GDASLQVDASAPLAMRRARVTTPVRTGVKAVDCFTPICAGQRIGVFAGSGVGKSTLLGML 182

Query: 182 ARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+  FD  ++ LVGERGREVREF+E+   G + + S+ +VAT DESP++R++APLTA T
Sbjct: 183 ARAPGFDLAVVCLVGERGREVREFLEEALAGAHARDSITIVATGDESPMMRRLAPLTATT 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G NVLLI+DS+TRFAH+ RE+A  +GE PVA GY  SVF+++PRLLER GP 
Sbjct: 243 VAEYFRDCGRNVLLIVDSVTRFAHASREVALAAGEPPVAHGYTPSVFADIPRLLERAGPG 302

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E+ KG IT V SVLVDGDNHNDPIAD VR  LDGHIVL+R++AE+GRYP +D   S+SRL
Sbjct: 303 EEGKGTITGVFSVLVDGDNHNDPIADCVRGTLDGHIVLDRAIAEQGRYPAIDLKTSISRL 362

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A  AW  +++ L+  L  L+ RFE+TRD+R++GGY+ G D  LD++V  VP +Y+ + QS
Sbjct: 363 AHHAWRPEQRHLIQKLRALVSRFEDTRDLRMLGGYQKGSDPELDQSVLLVPKLYEAVCQS 422

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P    S D F+E+  +LQ
Sbjct: 423 PQSPPSMDPFREVADRLQ 440


>gi|330813462|ref|YP_004357701.1| ATP synthase alpha chain [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486557|gb|AEA80962.1| ATP synthase alpha chain [Candidatus Pelagibacter sp. IMCC9063]
          Length = 511

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 182/431 (42%), Gaps = 22/431 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E++     V + G + S+      +  L   V  G+ V     +    G  + 
Sbjct: 10  KVIKEQIENFGSETEVSEVGQVLSVGDGIARIFGL-DNVEAGEMVEF---SEGTKGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G   +I  GD+V   G+           GRV++ LG PIDG   +    
Sbjct: 66  LENDNVGVVIFGDDSKIKEGDIVKRTGKIVDVAVGKSLLGRVVDGLGNPIDGKGPIDPKS 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 126 ERRRVDVKAPGIIARKSVHEPMQTGLKAIDSLIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +    +   D       I   +G++   V + ++        + ++VV AT+ +   L+ 
Sbjct: 186 NQKEINKSDDESKKLYCIYVAIGQKRSTVAQIVKTLEESGALEYTIVVAATASDPAPLQF 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF   G + L++ D +++ A + R+++      P    +P  VF    R
Sbjct: 246 LAPYIGCTMGEYFRDNGMHGLIVYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 305

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     ++   G++TA+  +     + +  I  +V SI DG I L   L  +G  P 
Sbjct: 306 LLERAAKLSEDQGGGSLTALPIIETQASDVSAYIPTNVISITDGQIFLETELFFKGVRPA 365

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++  S+   + ++ E   +     +   +D    + +++ 
Sbjct: 366 VNVGISVSRVGSSAQIKAMKQVAGSIKLELAQYRE---MAAFAQFGSDLDASTQQLLNRG 422

Query: 411 PIIYDFLKQSP 421
             + + LKQ  
Sbjct: 423 AKLTELLKQGQ 433


>gi|292670133|ref|ZP_06603559.1| ATP synthase F1 [Selenomonas noxia ATCC 43541]
 gi|292648232|gb|EFF66204.1| ATP synthase F1 [Selenomonas noxia ATCC 43541]
          Length = 505

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 186/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + ++  KN      V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMNPEEITSIIKERIKNYDVDLNVNDVGTVLEVGDGIAHIYGLEK-AMAGELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           +D  G V+ +  + V    +G   EI  GD V   GR   +       GRV++ALG+PID
Sbjct: 57  NDVYGLVLNLEQESVGAVLLGGDTEIKEGDTVKRTGRIMQVPVGEAMIGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P   +R+ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIDTTEFR-PVESPAPGIADRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +      I     +G++   V   ++    G  +  ++VV AT+ +S  L+
Sbjct: 176 TAIAVDTILNQKGQNCICVYVAIGQKASTVARVVKTLEDGGAMAYTIVVAATAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  KG + L + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEYFMYKGGHALCVYDDLSKHAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G+ITA+  +     + +  I  +V SI DG I+L+      G  P
Sbjct: 296 RLLERAAKLSDALGAGSITALPIIETLAGDLSAYIPTNVISITDGQIMLDTDAFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ+     S
Sbjct: 413 GARMVETLKQAQYSPLS 429


>gi|329114828|ref|ZP_08243585.1| ATP synthase subunit alpha [Acetobacter pomorum DM001]
 gi|326695959|gb|EGE47643.1| ATP synthase subunit alpha [Acetobacter pomorum DM001]
          Length = 512

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 119/438 (27%), Positives = 181/438 (41%), Gaps = 22/438 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q    + K   VV+ G I S+      V  L Q V  G+ V          G  + 
Sbjct: 11  DILKQQIASFDKESDVVETGTILSVGDGIARVFGL-QNVMSGELVDFPTAGQK--GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I   G    I  GD V   G    +       GRV++ LG PIDG   L   +
Sbjct: 68  LESDNVGIVIFGDDTNIREGDTVTRSGMVVSVPVGKGLLGRVVDGLGNPIDGKGPLTDVE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS---- 179
           L      K P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+T+L+    
Sbjct: 128 LRRA-EVKAPGIMPRQSVHEPMQTGIKAIDALVPVGRGQRELVIGDRQTGKTTILTDTIL 186

Query: 180 -MFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
                +D  D       I   VG++   V + +         K S+VV AT+ +   L+ 
Sbjct: 187 AQKTVNDEGDDKKSLYCIYVAVGQKRSTVAQLVRLLEEKGAMKYSIVVAATASDPAPLQY 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A  + EYF   G + L+  D +++ A + R+++      P    YP  VF    R
Sbjct: 247 LAPYAACAMGEYFRDNGMHALICYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFFLHSR 306

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E G  ++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 307 LLERAAKMSDEYGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETDLFYRGIRPA 366

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K + + 
Sbjct: 367 VNVGGSVSRVGSAAQIKAMKQVAGKIKLELAQYRE---MAAFSQFASDLDPATQKMLARG 423

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQS S   + +
Sbjct: 424 ARLVELLKQSQSSPLTVE 441


>gi|258541220|ref|YP_003186653.1| F0F1 ATP synthase subunit alpha [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632298|dbj|BAH98273.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635355|dbj|BAI01324.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638410|dbj|BAI04372.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-07]
 gi|256641464|dbj|BAI07419.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-22]
 gi|256644519|dbj|BAI10467.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-26]
 gi|256647574|dbj|BAI13515.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-32]
 gi|256650627|dbj|BAI16561.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653618|dbj|BAI19545.1| ATP synthase F1 alpha subunit [Acetobacter pasteurianus IFO
           3283-12]
          Length = 511

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 117/438 (26%), Positives = 181/438 (41%), Gaps = 22/438 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q    + K   VV+ G + S+      V  L Q V  G+ V          G  + 
Sbjct: 10  DILKQQIASFDKESDVVETGTVLSVGDGIARVFGL-QNVMSGELVDFPTAGQK--GMALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I   G    I  GD V   G    +       GRV++ LG PIDG   L   +
Sbjct: 67  LESDNVGIVIFGDDTNIREGDTVTRSGMVVSVPVGKGLLGRVVDGLGNPIDGKGPLTDVE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS---- 179
           L      K P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+T+L+    
Sbjct: 127 LRRA-EVKAPGIMPRQSVHEPMQTGIKAIDALVPVGRGQRELVIGDRQTGKTTILTDTIL 185

Query: 180 -MFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
                +D  D       I   +G++   V + +         K S+VV AT+ +   L+ 
Sbjct: 186 AQKTVNDEGDDKKSLYCIYVAIGQKRSTVAQLVRLLEEKGAMKYSIVVAATASDPAPLQY 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A  + EYF   G + L+  D +++ A + R+++      P    YP  VF    R
Sbjct: 246 LAPYAACAMGEYFRDNGMHALICYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFFLYSR 305

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E G  ++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 306 LLERAAKMSDEYGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETDLFYRGIRPA 365

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K + + 
Sbjct: 366 VNVGGSVSRVGSAAQIKAMKQVAGKIKLELAQYRE---MAAFSQFASDLDPATQKMLARG 422

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQS S   + +
Sbjct: 423 ARLVELLKQSQSSPLTVE 440


>gi|188586020|ref|YP_001917565.1| type III secretion system ATPase, FliI/YscN [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350707|gb|ACB84977.1| type III secretion system ATPase, FliI/YscN [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 439

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 158/437 (36%), Positives = 257/437 (58%), Gaps = 11/437 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +L+ L+Q   +   N +   G ++ +     TV        +GD  + +  + +   +V+
Sbjct: 7   DLDKLSQTIRN--SNTLPLQGEVTRVVG--LTVEARGPGAKIGDLCLIRSDDQEIECEVV 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
             N   + + P+G    ++ G+ V        +       GRV++ LG+P+DG   L   
Sbjct: 63  GFNDGKILLMPLGNLNNVAPGNKVITSRENLSVPVGPGLVGRVLDGLGRPMDGKGPLTNT 122

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                + +  P  ++R R++K  +TGI+ ID    +  GQR+G+F+GSG+GKSTLL M A
Sbjct: 123 KCRYPMENTPPAPLDRSRIQKPIQTGIKAIDGVLTIGKGQRMGIFSGSGVGKSTLLGMIA 182

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+      +I L+GERGREVREFI +D   + L++SV+VVATSD+  +LR    +TA  I
Sbjct: 183 RNTSASVNVIGLIGERGREVREFIEKDLGEEGLQRSVIVVATSDQPALLRIKGAMTATAI 242

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF   G++V+L++DS+TRFA + RE+   +GE P  RG+P SVF+ LP+LLER G S+
Sbjct: 243 AEYFRDCGNDVMLMMDSVTRFATAKREVGLATGEPPATRGFPPSVFAMLPQLLERSGTSD 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G++T + +VLVDGD+ ++P++D+VR +LDGHIVL+R LA +  YP +D L S+SR+ 
Sbjct: 303 K--GSVTGLYTVLVDGDDMDEPVSDTVRGVLDGHIVLSRKLAMQNHYPAIDILQSISRVM 360

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                   +K  + ++  +  +EE RD+  IG Y+ G +  +D A+  +  + +FL+Q  
Sbjct: 361 VDITDTQHQKAAAKISSALAAYEEARDLIEIGAYKKGSNPKVDWAMELIDDLNEFLRQEI 420

Query: 422 SDLSSEDVFQEITKKLQ 438
           ++ ++ D   E   KL+
Sbjct: 421 TEKTTLD---ETINKLK 434


>gi|256160498|ref|ZP_05458187.1| F0F1 ATP synthase subunit alpha [Brucella ceti M490/95/1]
 gi|256255704|ref|ZP_05461240.1| F0F1 ATP synthase subunit alpha [Brucella ceti B1/94]
 gi|261222915|ref|ZP_05937196.1| ATP synthase subunit alpha [Brucella ceti B1/94]
 gi|265998874|ref|ZP_06111431.1| ATP synthase subunit alpha [Brucella ceti M490/95/1]
 gi|260921499|gb|EEX88152.1| ATP synthase subunit alpha [Brucella ceti B1/94]
 gi|262553563|gb|EEZ09332.1| ATP synthase subunit alpha [Brucella ceti M490/95/1]
          Length = 509

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 185/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMVLNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|313901517|ref|ZP_07834964.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468212|gb|EFR63679.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           subterraneus DSM 13965]
          Length = 476

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 158/417 (37%), Positives = 237/417 (56%), Gaps = 10/417 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G++  +      V        LG+           +  +V+        + P+G    I 
Sbjct: 55  GWVEQVVG--LAVEARGPVSSLGELCWIDRPGRPPVPAEVVGFRGARTLLMPLGDARAIR 112

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+ FR++      GRV++ LG+P+DG   +   +      +  PP + R+ +
Sbjct: 113 PGSRVEATGQGFRVAVGEGLLGRVLDGLGRPLDGQGPV-AAEAWYPAEADPPPPLARRPI 171

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    G+R ID       GQR+G+FAGSG+GKSTLL+M  R    D V+++L+GER RE
Sbjct: 172 REPLPVGVRAIDALLTCGRGQRVGIFAGSGVGKSTLLAMMTRHTAADVVVVALIGERNRE 231

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VR+F++ +L  + +++VVV AT+D   ++R  A   A  IAE+F  +G +VLL++DS+TR
Sbjct: 232 VRDFVDHHLAGSRRRTVVVAATADRPALVRIKAAQVATAIAEFFRDRGRHVLLVMDSVTR 291

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A ++RE+    GE P  RGYP SVF+ LPRLLER G  +  +G+IT   +VLVDGD+ N
Sbjct: 292 YAMALREVGLAVGEPPATRGYPPSVFAALPRLLERAGTGD--RGSITGFYTVLVDGDDFN 349

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD+VR  LDGHIVL+R LAEEG++P VD LASVSRL  +   A        L   + 
Sbjct: 350 EPVADAVRGTLDGHIVLSRQLAEEGQFPAVDVLASVSRLMPELVDAAHWAAAQRLRRWLG 409

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            + E RD+  IG Y+ G +  +D+A+ ++P I  FL Q   + +S   F E   +LQ
Sbjct: 410 AYREARDLVEIGAYQRGTNPDVDRALERMPAIRAFLSQGRDEAAS---FSEAVARLQ 463


>gi|312115281|ref|YP_004012877.1| ATPase, FliI/YscN family [Rhodomicrobium vannielii ATCC 17100]
 gi|311220410|gb|ADP71778.1| ATPase, FliI/YscN family [Rhodomicrobium vannielii ATCC 17100]
          Length = 459

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 213/438 (48%), Positives = 291/438 (66%), Gaps = 3/438 (0%)

Query: 2   QKNLETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +  LETLA+  E      L +  G +  +++ +  V  LS+Y  LGD+V       D + 
Sbjct: 19  RTALETLAETFEAALDDRLAIVSGRVVELSTEHIRVEGLSKYTKLGDWVSIATDVGDAIA 78

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           + +R+  D + +  +    +  LG  V      ++ P   W GRVI+ALG+PID    L 
Sbjct: 79  ETLRVERDTILVRTIEERHQPFLGAPVRLASTMKLRPDETWKGRVIDALGRPIDNGPPLA 138

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +G  S+ +    P A+ RQRV +   TG+RVID+FTPLC GQRIG+FAGSG+GKSTLLSM
Sbjct: 139 RGRRSIPVDQAPPLALERQRVSEPVPTGVRVIDVFTPLCAGQRIGIFAGSGVGKSTLLSM 198

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R   FD  + + +GERGREVREFI+D      L K+V+VV+TSDESP++R++A  TA 
Sbjct: 199 LTRGSSFDVTVFAAIGERGREVREFIDDTLAKAGLAKAVLVVSTSDESPMMRRLAAKTAF 258

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AEYF  +G  VLL+ DS+TR+AH++REIA +SGE PV+RGYP SVF++LP+LLER G 
Sbjct: 259 TVAEYFRDEGQRVLLVFDSVTRYAHAVREIALSSGEPPVSRGYPPSVFTDLPKLLERAGN 318

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +    G+IT V SVLVDGD+HNDP+AD++R ILDGHIVL+R++A++GR+P VD L SVSR
Sbjct: 319 ASGT-GSITGVFSVLVDGDDHNDPVADTLRGILDGHIVLDRAIADQGRFPAVDILGSVSR 377

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           LA + WS  +K  V  L  LI RFEETRDIR+I G++P  D  LDKAV  VP +Y +L Q
Sbjct: 378 LAPRVWSPSQKTAVRDLRGLISRFEETRDIRMIAGHKPNNDAELDKAVRLVPALYRYLTQ 437

Query: 420 SPSDLSSEDVFQEITKKL 437
           S  DL   +   ++ + +
Sbjct: 438 SAEDLHPGETLDDMLRLM 455


>gi|71082937|ref|YP_265656.1| F0F1 ATP synthase subunit alpha [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762639|ref|ZP_01264604.1| ATP synthase subunit A [Candidatus Pelagibacter ubique HTCC1002]
 gi|115312260|sp|Q4FP36|ATPA_PELUB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71062050|gb|AAZ21053.1| H+-transporting two-sector ATPase (F0F1-type ATP synthase) alpha
           chain [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718441|gb|EAS85091.1| ATP synthase subunit A [Candidatus Pelagibacter ubique HTCC1002]
          Length = 511

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 105/427 (24%), Positives = 182/427 (42%), Gaps = 21/427 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            Q+ +   K  V + G + S+      V  L   V  G+ V     +    G  + +  +
Sbjct: 14  EQIKKFGDKAEVTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFSDGSK---GMALNLESE 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G   +I  GD+V   G            GRV++ LG PIDG  +L K      
Sbjct: 70  NVGVVIFGDDRKIKEGDVVKRTGSIVDTPVGKELLGRVVDGLGNPIDGKGALDKATKRSR 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK       +++   
Sbjct: 130 VEVKAPGIIPRQSVSEPMQTGLKSIDSLVPVGRGQRELIIGDRQTGKTAVAIDAIINQKK 189

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  D       I   +G++   VR+  +          + +V AT+ ++  L+ +AP 
Sbjct: 190 INESGDEKQKLYCIYVAIGQKRSTVRQIQKTLEEAGAMEYTTIVAATASDAAPLQFLAPY 249

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T  T+ EY+   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 250 TGCTMGEYYRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 309

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++  
Sbjct: 310 AAKLSDEHGGGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFNQGIRPAINVG 369

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK+  S+   + ++ E   +     +   +D    K +++   + 
Sbjct: 370 LSVSRVGSAAQTKAMKKVSGSMKLELAQYRE---MAAFAQFGSDLDASTQKLLNRGSKLT 426

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 427 ELLKQKQ 433


>gi|317121818|ref|YP_004101821.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           marianensis DSM 12885]
 gi|315591798|gb|ADU51094.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter
           marianensis DSM 12885]
          Length = 462

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 161/417 (38%), Positives = 235/417 (56%), Gaps = 10/417 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G++  +      V        LG+   +H+        +V+        + P+G    I 
Sbjct: 46  GWVEQVVG--LAVEARGPVSSLGELCWIHRAGLPPVPAEVVGFRGPHTLLMPLGDARAIR 103

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G LV   GR F +       GRV++ LG+P+DG   +   +       + PP + RQ +
Sbjct: 104 PGSLVEATGRGFTVGVGEGLLGRVLDGLGRPLDGQGPV-AVEAWYPAEGEPPPPLARQPI 162

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    G+R ID       GQR+G+FAGSG+GKSTLL+M  R    D V+++L+GER RE
Sbjct: 163 REPLPVGVRSIDALLTCGRGQRVGIFAGSGVGKSTLLAMMTRHTAADVVVVALIGERNRE 222

Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           VR+F++ +L  + +++VVV AT+D   ++R  A   A  IAE+F  +G +VLL++DS+TR
Sbjct: 223 VRDFVDHHLAGSRRRTVVVAATADRPALVRIKAAQVATAIAEFFRDRGRHVLLVMDSVTR 282

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A ++RE+    GE P  RGYP SVF+ LPRLLER G     +G+IT   +VLVDGD+ N
Sbjct: 283 YAMALREVGLAVGEPPATRGYPPSVFAALPRLLERAG--TGPRGSITGFYTVLVDGDDLN 340

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD+VR  LDGHIVL+R LAEEG++P VD LASVSRL  +            L   + 
Sbjct: 341 EPIADAVRGTLDGHIVLSRQLAEEGQFPAVDVLASVSRLMPELVEPAHWAAAQRLRRWLG 400

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            + E RD+  IG Y+ G +  +D+A+ ++P I  FL Q   + S    F E   +LQ
Sbjct: 401 AYREARDLLEIGAYQRGSNPDVDRALERMPAIRAFLTQGRDEAS---PFAEAVARLQ 454


>gi|262199223|ref|YP_003270432.1| ATP synthase F1 subunit alpha [Haliangium ochraceum DSM 14365]
 gi|262082570|gb|ACY18539.1| ATP synthase F1, alpha subunit [Haliangium ochraceum DSM 14365]
          Length = 512

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 185/424 (43%), Gaps = 13/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           + + +  +DY K + V + G + +       +  LS  V  G+ V   G   + + G V+
Sbjct: 10  DIIRKQIQDYEKRVEVTETGTVLTAGDGIARIYGLS-GVMAGEMVELSGTGGETVQGMVL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +  +G  E I  GD     GR   +       GRV+NA+G+PIDG   +   
Sbjct: 69  NLEEDNVGVALLGKFESIKEGDTARRTGRIVEVPVGDELLGRVVNAIGEPIDGGPPIATK 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +   ++  K P  M R+ V +  +TGI+ ID   P+  GQR  +    G+GK+ +     
Sbjct: 129 E-RRKVELKAPGIMARKSVHEPMQTGIKAIDSMIPIGRGQRELIIGDRGVGKTAVALDTI 187

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
            +            +G++   V   ++        + + VVVA + E   L+ +AP T V
Sbjct: 188 INQKGQNVYCFYVAIGQKQSTVASLVDKLKKAGAFEYTTVVVAGAAEPAPLQFIAPYTGV 247

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AE++   G + L++ D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 248 AMAEHYRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYIHSRLLERAAK 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 308 VNDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEGDLFYSGIRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK+   L   +  F E   +     +   +D      + +   + + L
Sbjct: 368 SRVGGSAQTKAMKKVAGRLRLELASFRE---MAAFAQFGSDLDKATQAKLARGERMTELL 424

Query: 418 KQSP 421
           KQ+ 
Sbjct: 425 KQAQ 428


>gi|310818070|ref|YP_003950428.1| ATP synthase f1 subunit alpha [Stigmatella aurantiaca DW4/3-1]
 gi|309391142|gb|ADO68601.1| ATP synthase F1, alpha subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 515

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 96/424 (22%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  +DY K   V + G + S+      +  L + V  G+ V          G V+ + 
Sbjct: 12  IREQIKDYGKKVTVAETGTVLSVGDGIARIYGL-EGVQAGELVEFSNG---VRGLVLNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G  ++I  GD V    +   +       GRV+NALG+P+DG   +   +  
Sbjct: 68  EDNVGVAIMGEFKDIREGDSVKRTSQIASVPVGKGLLGRVVNALGEPLDGKGPIQAAETR 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  K P  + R+ V +  +TGI+ +D   P+  GQR  +      GK+ +      + 
Sbjct: 128 R-LEIKAPGIVKRKSVHEPLQTGIKALDALVPIGRGQRELIIGDRQTGKTAVAVDAIINQ 186

Query: 186 CF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V + ++       L+ + VV A + +   ++  AP T VT+ 
Sbjct: 187 KGLNVYCIYVAIGQKQSTVAQVVDKLSKFGALEYTTVVAANASDPAPMQFFAPYTGVTMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EY+     + L++ D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 247 EYYRDNKMHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYIHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +G  ++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFAGVRPAINVGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     +++  S+   + ++ E   +     +   +D    + + +   + + LKQ 
Sbjct: 367 GSAAQIKAMRQVAGSMKLELAQYRE---LAAFAQFGSDLDKATQETLARGARLTELLKQG 423

Query: 421 PSDL 424
             + 
Sbjct: 424 QYEP 427


>gi|17986533|ref|NP_539167.1| F0F1 ATP synthase subunit alpha [Brucella melitensis bv. 1 str.
           16M]
 gi|225853245|ref|YP_002733478.1| F0F1 ATP synthase subunit alpha [Brucella melitensis ATCC 23457]
 gi|256045397|ref|ZP_05448291.1| F0F1 ATP synthase subunit alpha [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256114365|ref|ZP_05455098.1| F0F1 ATP synthase subunit alpha [Brucella melitensis bv. 3 str.
           Ether]
 gi|256263267|ref|ZP_05465799.1| ATP synthase subunit alpha [Brucella melitensis bv. 2 str. 63/9]
 gi|260565711|ref|ZP_05836194.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. 16M]
 gi|265991826|ref|ZP_06104383.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995665|ref|ZP_06108222.1| ATP synthase subunit alpha [Brucella melitensis bv. 3 str. Ether]
 gi|81852463|sp|Q8YJ37|ATPA_BRUME RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807682|sp|C0RF52|ATPA_BRUMB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|17982138|gb|AAL51431.1| ATP synthase alpha chain [Brucella melitensis bv. 1 str. 16M]
 gi|225641610|gb|ACO01524.1| ATP synthase F1, alpha subunit [Brucella melitensis ATCC 23457]
 gi|260151084|gb|EEW86179.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. 16M]
 gi|262766949|gb|EEZ12567.1| ATP synthase subunit alpha [Brucella melitensis bv. 3 str. Ether]
 gi|263002782|gb|EEZ15185.1| ATP synthase subunit alpha [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093231|gb|EEZ17328.1| ATP synthase subunit alpha [Brucella melitensis bv. 2 str. 63/9]
 gi|326409804|gb|ADZ66869.1| F0F1 ATP synthase subunit alpha [Brucella melitensis M28]
 gi|326539521|gb|ADZ87736.1| ATP synthase F1, alpha subunit [Brucella melitensis M5-90]
          Length = 509

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|241206627|ref|YP_002977723.1| F0F1 ATP synthase subunit alpha [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860517|gb|ACS58184.1| ATP synthase F1, alpha subunit [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 509

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINATRRSR-VDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +L     +                +   VG++   V +F++        K S++V AT
Sbjct: 176 TAILLDAFLNQKAIHDNGPEGEKLYCVYVAVGQKRSTVAQFVKVLEERGALKYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A S R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCAMGEYFRDNGMHALIGYDDLSKQAVSYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +KG  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDKGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|209551226|ref|YP_002283143.1| F0F1 ATP synthase subunit alpha [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226739930|sp|B5ZSN9|ATPA_RHILW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|209536982|gb|ACI56917.1| ATP synthase F1, alpha subunit [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 509

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINATRRSR-VDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +L     +                +   VG++   V +F++        K S++V AT
Sbjct: 176 TAILLDAFLNQKAIHDNGPEGEKLYCVYVAVGQKRSTVAQFVKVLEERGALKYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A S R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCAMGEYFRDNGMHALIGYDDLSKQAVSYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +KG  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDKGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|87200413|ref|YP_497670.1| F0F1 ATP synthase subunit alpha [Novosphingobium aromaticivorans
           DSM 12444]
 gi|115312259|sp|Q2G5N7|ATPA_NOVAD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|87136094|gb|ABD26836.1| ATP synthase F1 subcomplex alpha subunit [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 509

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 186/441 (42%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++++ +D   +      V + G + S+      +  L + V  G+ V      
Sbjct: 1   MEIRAAEISKVIKDQIASFGTEAQVSEVGSVLSVGDGIARIHGLDK-VQAGEMVEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --VKGMALNLEADNVGVVIFGSDSEIKEGDVVKRTGTIVDVPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIVDA-TRQRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T ++  A +   D       I   VG++   V + +     +     S+VV AT
Sbjct: 176 TAVAIDTFINQKAVNAGTDEGKKLYCIYVAVGQKRSTVAQIVRQLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T  T+ E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGATMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDENGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETG 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGSSAQTKAMKKVAGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              K +++   + + LKQ   
Sbjct: 413 STQKLLNRGARLTELLKQPQF 433


>gi|262277905|ref|ZP_06055698.1| ATP synthase F1, alpha subunit [alpha proteobacterium HIMB114]
 gi|262225008|gb|EEY75467.1| ATP synthase F1, alpha subunit [alpha proteobacterium HIMB114]
          Length = 510

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 27/440 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   + ++ +D  KN      V + G + S+      +  L   V  G+ V     +
Sbjct: 1   MDINPSEITKVIKDQIKNFGKDAEVSEVGQVLSVGDGIARIYGL-DNVEAGEMVEF---S 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V   G    +       GRV++ LG PID
Sbjct: 57  EGTKGMALNLETDNVGVVIFGDDSHIKEGDTVKRTGEIVDVPVGKELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINSKEKKR-VEVKAPGIIPRKSVNEPMQTGLKAIDSLIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+++    +   D       +   +G++   V + ++          S+VV AT
Sbjct: 176 TAIAIDTIINQKEINKSDDETKKLYCVYVAIGQKRSTVAQIVKTLEDAGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP T   + E+F   G + L++ D +++ A + R+++      P    +P
Sbjct: 236 ASDPAPLQFLAPYTGCAMGEFFRDNGMHGLIVYDDLSKQAVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGGGSLTALPIIETQASDVSAYIPTNVISITDGQIFLETE 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  ++   + ++ E   +     +   +D 
Sbjct: 356 LFFQGVRPAVNVGISVSRVGSAAQIKAMKQVAGTIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              + +++   + + LKQ  
Sbjct: 413 STQQLLNRGSKLTELLKQGQ 432


>gi|307294139|ref|ZP_07573983.1| ATP synthase F1, alpha subunit [Sphingobium chlorophenolicum L-1]
 gi|306880290|gb|EFN11507.1| ATP synthase F1, alpha subunit [Sphingobium chlorophenolicum L-1]
          Length = 509

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 106/447 (23%), Positives = 187/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   ++++ +D   N      V + G + ++      V  L   V  G+ V      
Sbjct: 1   MDINAAEISKVIKDQIANFGTEAQVSEVGSVLTVGDGIARVHGL-DNVQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD V   G    +       GRV++ LG PID
Sbjct: 59  --VQGMALNLEADNVGVVIFGSDAEIKEGDTVKRTGTIVDVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQYTE-RKRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T ++    +   D       I   VG++   V + ++    +     S+VV AT
Sbjct: 176 TAVAIDTFINQKGINAGDDESKKLYCIYVAVGQKRSTVAQIVKQLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T VT+ E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGVTMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER        G  ++TA+  +     + +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKMNDANGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ+       +
Sbjct: 413 STQKLLNRGARLTELLKQAQFSPLPFE 439


>gi|294012668|ref|YP_003546128.1| F-type H+-transporting ATPase alpha chain [Sphingobium japonicum
           UT26S]
 gi|292675998|dbj|BAI97516.1| F-type H+-transporting ATPase alpha chain [Sphingobium japonicum
           UT26S]
          Length = 509

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 106/447 (23%), Positives = 187/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   ++++ +D   N      V + G + ++      V  L   V  G+ V      
Sbjct: 1   MDINAAEISKVIKDQIANFGTEAQVSEVGSVLTVGDGIARVHGL-DNVQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD V   G    +       GRV++ LG PID
Sbjct: 59  --VQGMALNLEADNVGVVIFGSDAEIKEGDTVKRTGTIVDVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQYTE-RKRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T ++    +   D       I   VG++   V + ++    +     S+VV AT
Sbjct: 176 TAVAIDTFINQKGINAGDDESKKLYCIYVAVGQKRSTVAQIVKQLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T VT+ E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGVTMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER        G  ++TA+  +     + +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKMNDANGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ+       +
Sbjct: 413 STQKLLNRGARLTELLKQAQFSPLPFE 439


>gi|190893718|ref|YP_001980260.1| H(+)-transporting ATP synthase, alpha subunit [Rhizobium etli CIAT
           652]
 gi|226739929|sp|B3PQ70|ATPA_RHIE6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190698997|gb|ACE93082.1| H(+)-transporting ATP synthase protein, alpha subunit [Rhizobium
           etli CIAT 652]
          Length = 509

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINATRRSR-VDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +L     +                +   VG++   V +F++        K S++V AT
Sbjct: 176 TAILLDAFLNQKAIHESGPEGEKLYCVYVAVGQKRSTVAQFVKVLEERGALKYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A S R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCAMGEYFRDNGMHALIGYDDLSKQAVSYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +KG  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDKGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|161619721|ref|YP_001593608.1| F0F1 ATP synthase subunit alpha [Brucella canis ATCC 23365]
 gi|163845377|ref|YP_001623032.1| F0F1 ATP synthase subunit alpha [Brucella suis ATCC 23445]
 gi|225628355|ref|ZP_03786389.1| ATP synthase F1, alpha subunit [Brucella ceti str. Cudo]
 gi|254694446|ref|ZP_05156274.1| F0F1 ATP synthase subunit alpha [Brucella abortus bv. 3 str. Tulya]
 gi|254703567|ref|ZP_05165395.1| F0F1 ATP synthase subunit alpha [Brucella suis bv. 3 str. 686]
 gi|254708801|ref|ZP_05170612.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis B2/94]
 gi|254714643|ref|ZP_05176454.1| F0F1 ATP synthase subunit alpha [Brucella ceti M644/93/1]
 gi|254717541|ref|ZP_05179352.1| F0F1 ATP synthase subunit alpha [Brucella ceti M13/05/1]
 gi|256030327|ref|ZP_05443941.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis M292/94/1]
 gi|256061825|ref|ZP_05451960.1| F0F1 ATP synthase subunit alpha [Brucella neotomae 5K33]
 gi|256370205|ref|YP_003107716.1| ATP synthase subunit A [Brucella microti CCM 4915]
 gi|260168001|ref|ZP_05754812.1| F0F1 ATP synthase subunit alpha [Brucella sp. F5/99]
 gi|260568872|ref|ZP_05839340.1| ATP synthase subunit alpha [Brucella suis bv. 4 str. 40]
 gi|261214760|ref|ZP_05929041.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 3 str.
           Tulya]
 gi|261219375|ref|ZP_05933656.1| ATP synthase subunit alpha [Brucella ceti M13/05/1]
 gi|261316294|ref|ZP_05955491.1| ATP synthase subunit alpha [Brucella pinnipedialis B2/94]
 gi|261322437|ref|ZP_05961634.1| ATP synthase subunit alpha [Brucella ceti M644/93/1]
 gi|261325829|ref|ZP_05965026.1| ATP synthase subunit alpha [Brucella neotomae 5K33]
 gi|261754200|ref|ZP_05997909.1| ATP synthase subunit alpha [Brucella suis bv. 3 str. 686]
 gi|261757446|ref|ZP_06001155.1| ATP synthase subunit alpha [Brucella sp. F5/99]
 gi|265987361|ref|ZP_06099918.1| ATP synthase subunit alpha [Brucella pinnipedialis M292/94/1]
 gi|306844781|ref|ZP_07477366.1| ATP synthase F1, alpha subunit [Brucella sp. BO1]
 gi|189081289|sp|A9M839|ATPA_BRUC2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081290|sp|A9WWS4|ATPA_BRUSI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161336532|gb|ABX62837.1| ATP synthase F1, alpha subunit [Brucella canis ATCC 23365]
 gi|163676100|gb|ABY40210.1| ATP synthase F1, alpha subunit [Brucella suis ATCC 23445]
 gi|225616201|gb|EEH13249.1| ATP synthase F1, alpha subunit [Brucella ceti str. Cudo]
 gi|256000368|gb|ACU48767.1| ATP synthase subunit A [Brucella microti CCM 4915]
 gi|260154256|gb|EEW89338.1| ATP synthase subunit alpha [Brucella suis bv. 4 str. 40]
 gi|260916367|gb|EEX83228.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 3 str.
           Tulya]
 gi|260924464|gb|EEX91032.1| ATP synthase subunit alpha [Brucella ceti M13/05/1]
 gi|261295127|gb|EEX98623.1| ATP synthase subunit alpha [Brucella ceti M644/93/1]
 gi|261295517|gb|EEX99013.1| ATP synthase subunit alpha [Brucella pinnipedialis B2/94]
 gi|261301809|gb|EEY05306.1| ATP synthase subunit alpha [Brucella neotomae 5K33]
 gi|261737430|gb|EEY25426.1| ATP synthase subunit alpha [Brucella sp. F5/99]
 gi|261743953|gb|EEY31879.1| ATP synthase subunit alpha [Brucella suis bv. 3 str. 686]
 gi|264659558|gb|EEZ29819.1| ATP synthase subunit alpha [Brucella pinnipedialis M292/94/1]
 gi|306274953|gb|EFM56723.1| ATP synthase F1, alpha subunit [Brucella sp. BO1]
          Length = 509

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|306841514|ref|ZP_07474213.1| ATP synthase F1, alpha subunit [Brucella sp. BO2]
 gi|306288425|gb|EFM59782.1| ATP synthase F1, alpha subunit [Brucella sp. BO2]
          Length = 509

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|15966789|ref|NP_387142.1| F0F1 ATP synthase subunit alpha [Sinorhizobium meliloti 1021]
 gi|307301617|ref|ZP_07581376.1| ATP synthase F1, alpha subunit [Sinorhizobium meliloti BL225C]
 gi|307316359|ref|ZP_07595803.1| ATP synthase F1, alpha subunit [Sinorhizobium meliloti AK83]
 gi|81633813|sp|Q92LK6|ATPA_RHIME RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|15076061|emb|CAC47615.1| Probable ATP synthase subunit alpha [Sinorhizobium meliloti 1021]
 gi|306898199|gb|EFN28941.1| ATP synthase F1, alpha subunit [Sinorhizobium meliloti AK83]
 gi|306903315|gb|EFN33904.1| ATP synthase F1, alpha subunit [Sinorhizobium meliloti BL225C]
          Length = 509

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 182/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIN-AKQRARVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   +G++   V +F++        + S++V AT
Sbjct: 176 TAIILDTILNQKAIHDNGPEGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E+G  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLSDERGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|330991785|ref|ZP_08315735.1| ATP synthase subunit alpha [Gluconacetobacter sp. SXCC-1]
 gi|329761253|gb|EGG77747.1| ATP synthase subunit alpha [Gluconacetobacter sp. SXCC-1]
          Length = 513

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 106/438 (24%), Positives = 177/438 (40%), Gaps = 21/438 (4%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q    + K   V + G I S+      V  L Q V  G+ +          G  + 
Sbjct: 11  DILKQQIATFDKAADVAETGTILSVGDGIARVYGL-QNVEAGEMLDFPASGQK--GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G    +  GD V   G+    P      GRV++ LG PIDG   L    
Sbjct: 68  LENDNVGVVIFGDDTAMREGDTVARTGKVVEVPTGKALLGRVVDGLGNPIDGKGPLVGEV 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +S     K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+ +L     
Sbjct: 128 ISKRAEIKAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIV 187

Query: 184 SDCFD----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +                I   +G++   V + +           S+VV AT+ +   ++ 
Sbjct: 188 NQKSVNALGDESKSLYCIYVAIGQKRSTVAQLVRTLEETGAMEYSIVVAATASDPAPMQY 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A ++ EYF   G + L++ D +++ A + R+++      P    YP  VF    R
Sbjct: 248 LAPYAACSMGEYFRDNGMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +     + +  I  +V SI DG + L   L   G  P 
Sbjct: 308 LLERAAKMSDKFGAGSLTALPVIETQAGDVSAYIPTNVISITDGQVFLETDLFYRGIRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K + + 
Sbjct: 368 VNVGGSVSRVGSAAQIKAMKQVAGKIKLELAQYRE---MAAFSQFASDLDPATQKQLARG 424

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ  +   S +
Sbjct: 425 ARLVELLKQPETSPLSVE 442


>gi|254719789|ref|ZP_05181600.1| F0F1 ATP synthase subunit alpha [Brucella sp. 83/13]
 gi|265984808|ref|ZP_06097543.1| ATP synthase subunit alpha [Brucella sp. 83/13]
 gi|306839486|ref|ZP_07472294.1| ATP synthase F1, alpha subunit [Brucella sp. NF 2653]
 gi|264663400|gb|EEZ33661.1| ATP synthase subunit alpha [Brucella sp. 83/13]
 gi|306405431|gb|EFM61702.1| ATP synthase F1, alpha subunit [Brucella sp. NF 2653]
          Length = 509

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|62290666|ref|YP_222459.1| F0F1 ATP synthase subunit alpha [Brucella abortus bv. 1 str. 9-941]
 gi|82700581|ref|YP_415155.1| F0F1 ATP synthase subunit alpha [Brucella melitensis biovar Abortus
           2308]
 gi|189024878|ref|YP_001935646.1| F0F1 ATP synthase subunit alpha [Brucella abortus S19]
 gi|237816167|ref|ZP_04595162.1| ATP synthase F1, alpha subunit [Brucella abortus str. 2308 A]
 gi|254689954|ref|ZP_05153208.1| F0F1 ATP synthase subunit alpha [Brucella abortus bv. 6 str. 870]
 gi|254698105|ref|ZP_05159933.1| F0F1 ATP synthase subunit alpha [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254730989|ref|ZP_05189567.1| F0F1 ATP synthase subunit alpha [Brucella abortus bv. 4 str. 292]
 gi|256258209|ref|ZP_05463745.1| F0F1 ATP synthase subunit alpha [Brucella abortus bv. 9 str. C68]
 gi|260547098|ref|ZP_05822836.1| ATP synthase subunit alpha [Brucella abortus NCTC 8038]
 gi|260755489|ref|ZP_05867837.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 6 str.
           870]
 gi|260758712|ref|ZP_05871060.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 4 str.
           292]
 gi|260762546|ref|ZP_05874883.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884510|ref|ZP_05896124.1| ATP synthase subunit alpha [Brucella abortus bv. 9 str. C68]
 gi|297249058|ref|ZP_06932766.1| ATP synthase F1, alpha subunit [Brucella abortus bv. 5 str. B3196]
 gi|75496277|sp|Q57B86|ATPA_BRUAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115312238|sp|Q2YLI5|ATPA_BRUA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739850|sp|B2S7M5|ATPA_BRUA1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|62196798|gb|AAX75098.1| AtpA, ATP synthase F1, alpha subunit [Brucella abortus bv. 1 str.
           9-941]
 gi|82616682|emb|CAJ11765.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region:H+-transporting two-sector ATPase, alpha subunit,
           C-ter [Brucella melitensis biovar Abortus 2308]
 gi|189020450|gb|ACD73172.1| ATP synthase subunit A [Brucella abortus S19]
 gi|237788629|gb|EEP62842.1| ATP synthase F1, alpha subunit [Brucella abortus str. 2308 A]
 gi|260095463|gb|EEW79341.1| ATP synthase subunit alpha [Brucella abortus NCTC 8038]
 gi|260669030|gb|EEX55970.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 4 str.
           292]
 gi|260672972|gb|EEX59793.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675597|gb|EEX62418.1| ATP synthase F1 sector subunit alpha [Brucella abortus bv. 6 str.
           870]
 gi|260874038|gb|EEX81107.1| ATP synthase subunit alpha [Brucella abortus bv. 9 str. C68]
 gi|297174191|gb|EFH33548.1| ATP synthase F1, alpha subunit [Brucella abortus bv. 5 str. B3196]
          Length = 509

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|312115962|ref|YP_004013558.1| ATP synthase F1 subunit alpha [Rhodomicrobium vannielii ATCC 17100]
 gi|311221091|gb|ADP72459.1| ATP synthase F1, alpha subunit [Rhodomicrobium vannielii ATCC
           17100]
          Length = 513

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 108/436 (24%), Positives = 184/436 (42%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      V  L   V  G+ V   G      G
Sbjct: 15  LKEQIKNFGQEAE------VSEIGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG---VRG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G+   I  GD V   G            GRV++ LG PIDG   +
Sbjct: 65  MALNLEADNVGVVIFGLDTNIKEGDTVKRTGAIVETPVGKGLLGRVVDGLGNPIDGKGPI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  K P  + RQ V++  +TGI+ ID   P+  GQR  +      GK     
Sbjct: 125 QYTEKRR-VDVKAPGILPRQSVKEPMQTGIKAIDALIPIGRGQRELIIGDRQTGKTAVAL 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
             +L+  + +   D       I   VG++   V +F++        + S+VV AT+ +  
Sbjct: 184 DAILNQKSVNATGDESQKLYCIYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAATASDPA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP T  T+ EYF   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 244 PMQFIAPYTGCTMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G+   TA+  V    ++ +  I  +V SI DG I L   L  +G
Sbjct: 304 LHSRLLERAAKLNPDHGSGSLTALPVVETQANDVSAYIPTNVISITDGQIFLETDLFYQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  ++   + ++ E   +     +   +D    + 
Sbjct: 364 IRPAVNVGISVSRVGSAAQIKAMKQVAGAIKGELAQYRE---MAAFAQFGSDLDAATQRL 420

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   + + LKQ   
Sbjct: 421 LARGSRLTELLKQPQF 436


>gi|83591196|ref|YP_431205.1| ATP synthase F1, alpha subunit [Moorella thermoacetica ATCC 39073]
 gi|115312251|sp|Q2RFX7|ATPA_MOOTA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|83574110|gb|ABC20662.1| ATP synthase F1 subcomplex alpha subunit [Moorella thermoacetica
           ATCC 39073]
          Length = 507

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 102/427 (23%), Positives = 174/427 (40%), Gaps = 16/427 (3%)

Query: 6   ETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E Y   +   + G ++ +      +  L +    G+ +   G   D  G V+ 
Sbjct: 10  SILKNQIEQYQLEVEMAEVGTVTQVGDGIARIYGLDR-AMAGELLEFPG---DIYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   GR   +       GRV+NA+G+PIDG   + + D
Sbjct: 66  LEEDNVGAVILGPYTHIKEGDQVKRTGRIVEVPVGEALIGRVVNAMGQPIDGKGPI-QTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + S  P  + RQ V    +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRPVESPAPGVVYRQPVNTPLQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIAVDTII 184

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V   ++          ++VV+AT+ E   +  +AP    T
Sbjct: 185 NQKGQNVICIYVAIGQKASTVAGVVQRLEEAGAMEYTIVVMATASEPAPMLYIAPYAGCT 244

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           + EYF   +  +VL + D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 245 MGEYFMYEQHRDVLCVYDDLSKHAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++   SV
Sbjct: 305 LNDSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESDLFYAGQRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++   L   + ++ E   +     +   +D      + +   + + L
Sbjct: 365 SRVGGAAQIKAMKQVAGRLRLDLAQYRE---LAAFAQFGSDLDKATQARLARGERMMEIL 421

Query: 418 KQSPSDL 424
           KQ     
Sbjct: 422 KQDQYQP 428


>gi|148266271|ref|YP_001232977.1| F0F1 ATP synthase subunit alpha [Geobacter uraniireducens Rf4]
 gi|189081302|sp|A5G9D6|ATPA_GEOUR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146399771|gb|ABQ28404.1| ATP synthase F1 subcomplex alpha subunit [Geobacter uraniireducens
           Rf4]
          Length = 502

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 182/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     K       V + G I SI      +  L +    G+ +   G  
Sbjct: 1   MEIRAEEISEIIRKQIKEYGTEVAVAETGTIISIGDGIARIHGLDK-AMAGELLEFPGGI 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G V+ +  D V    +G   EI  GD V   G+   +       GRV+NALG+PID
Sbjct: 60  S---GMVLNLEEDNVGAAILGEFSEIKEGDTVKRTGKIVEVPVGEALIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D   ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TDKFGKVEVKAPGIVQRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +           +++V AT+ E   L+
Sbjct: 176 TAVAIDTIINQKGGDVVCIYVAIGQKRSTVAQVVSKLQEHGAMDYTIIVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T VT+ EYF   G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FISPYTGVTMGEYFRDSGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER        G  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKVSDACGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQVKAMKQVAGTLRLSLAQYRE---MAAFAQFGSDLDKATQMQLAR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GERLVEILKQPQ 424


>gi|116254141|ref|YP_769979.1| F0F1 ATP synthase subunit alpha [Rhizobium leguminosarum bv. viciae
           3841]
 gi|118573486|sp|Q1MAZ0|ATPA_RHIL3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115258789|emb|CAK09895.1| putative ATP synthase alpha chain [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 509

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 182/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINATRRSR-VDIKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +L     +                +   +G++   V +F++        K S++V AT
Sbjct: 176 TAILLDAFLNQKAIHDNGPEGEKLYCVYVAIGQKRSTVAQFVKVLEERGALKYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A S R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGMHALIGYDDLSKQAVSYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDMGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|217077671|ref|YP_002335389.1| flagellar protein export ATPase FliI [Thermosipho africanus TCF52B]
 gi|217037526|gb|ACJ76048.1| flagellar protein export ATPase FliI [Thermosipho africanus TCF52B]
          Length = 434

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 174/435 (40%), Positives = 256/435 (58%), Gaps = 11/435 (2%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
             LE L +  E++  N   + G +S I     T+        LG+           L +V
Sbjct: 2   NRLELLKKRFENF--NPYQKIGSVSKIVG--LTIESKGPDAFLGELCKIITDYKKTLAEV 57

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  N + + + P+     +  G  V   G    +  S    G+VI++LG+P+DG     K
Sbjct: 58  VGFNDNGIILMPLEDISGLKKGCQVLKTGEYVSVPVSEELLGKVIDSLGRPLDGKKIYTK 117

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
             +   I+ + P  + R+R+      G+R ID F  L +GQRIG+FAGSG+GKSTLL M 
Sbjct: 118 EKV--PIVREAPNPLVRKRITTPISVGVRAIDGFLTLGYGQRIGIFAGSGVGKSTLLGMV 175

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D  +ISL+GERGREVREFI +D   + LK+SVVVV+TSD+  +LR  A LTA +
Sbjct: 176 ARNTSADINVISLIGERGREVREFIEKDLKKEGLKRSVVVVSTSDQPALLRVKALLTATS 235

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG NVLL++DS+TR+A + RE+   +GE P  RGYP SVF+ LP++LER G S
Sbjct: 236 IAEYFRDKGYNVLLMVDSLTRWAIAQREVGLATGEPPTTRGYPPSVFAGLPKILERAGNS 295

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +K  G+IT + +VLV+ D+ N+PI+D+VR I+DGHI+L+R LAE   YP +D L SVSRL
Sbjct: 296 DK--GSITGIYTVLVESDDFNEPISDTVRGIVDGHIILSRKLAESAHYPAIDILMSVSRL 353

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +     + K     +  L+  + + +D+  +G Y+ G +  +DKA+  +  I  FL+QS
Sbjct: 354 MNDITRKEHKIAALKIKDLLATYYDAKDLIDVGAYKKGTNPKIDKAIELIDEINKFLRQS 413

Query: 421 PSD-LSSEDVFQEIT 434
             + +S ED  + + 
Sbjct: 414 VDEKMSFEDTVEYLI 428


>gi|86359453|ref|YP_471345.1| F0F1 ATP synthase subunit alpha [Rhizobium etli CFN 42]
 gi|119367960|sp|Q2K3G8|ATPA_RHIEC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|86283555|gb|ABC92618.1| H(+)-transporting ATP synthase protein, alpha subunit [Rhizobium
           etli CFN 42]
          Length = 509

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINATRRSR-VDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +L     +                +   VG++   V +F++        K S+++ AT
Sbjct: 176 TAILLDAFLNQKAIHDNGPEGEKLYCVYVAVGQKRSTVAQFVKVLEERGALKYSIIIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A S R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCAMGEYFRDNGMHALIGYDDLSKQAVSYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +KG  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDKGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|254708347|ref|ZP_05170175.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis M163/99/10]
 gi|261315846|ref|ZP_05955043.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis M163/99/10]
 gi|261304872|gb|EEY08369.1| F0F1 ATP synthase subunit alpha [Brucella pinnipedialis M163/99/10]
          Length = 500

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|254700445|ref|ZP_05162273.1| F0F1 ATP synthase subunit alpha [Brucella suis bv. 5 str. 513]
 gi|261750946|ref|ZP_05994655.1| ATP synthase subunit alpha [Brucella suis bv. 5 str. 513]
 gi|261740699|gb|EEY28625.1| ATP synthase subunit alpha [Brucella suis bv. 5 str. 513]
          Length = 509

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLIELLKQPQF 433


>gi|90418401|ref|ZP_01226313.1| flagellum-specific ATP synthase FliI [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90338073|gb|EAS51724.1| flagellum-specific ATP synthase FliI [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 457

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 210/418 (50%), Positives = 291/418 (69%), Gaps = 4/418 (0%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG--EE 80
            G+I  ++   + V  LS +V LGD +   G + D +G+V+RI    + + P        
Sbjct: 22  TGHIIDVSPQAFRVAGLSPFVRLGDRIACPGDDGDAIGEVVRIEQASLTVKPFANRFVRG 81

Query: 81  ISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           +         G F +SPS  W GRV++A G+P DG   + +GD      +   PAM R R
Sbjct: 82  VK--APARQIGPFMVSPSRSWKGRVLDAFGQPTDGKGPVSEGDDPRRADAPPLPAMQRGR 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
             K   TG+R +DIFTPL  GQRIG+FAGSG+GKSTL+SM AR+  FD V+++LVGERGR
Sbjct: 140 TGKPVATGVRALDIFTPLVRGQRIGIFAGSGVGKSTLMSMLARAKGFDTVVVALVGERGR 199

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EVREF+E+ +  NL K V +VAT DESP++R++AP TA ++AEYF  +GD+VLLI+DS+T
Sbjct: 200 EVREFLEETMAGNLAKVVTIVATGDESPMMRRLAPRTATSVAEYFRDRGDSVLLIVDSVT 259

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R AH+ R++A  +GE PVARGYP SVFSELP+LLER GP  +  G+IT + SVLVDGD+H
Sbjct: 260 RLAHAARDVALAAGEPPVARGYPPSVFSELPQLLERAGPGLEGSGSITGIFSVLVDGDDH 319

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDPIAD++R  LDGHIVL+R++AE+GR+P VD L S+SRLAD+AW+  E++LVS L  +I
Sbjct: 320 NDPIADAIRGTLDGHIVLDRAIAEQGRFPAVDVLKSISRLADRAWNPQERELVSRLRSMI 379

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            R+E+TRD+RL+GGY+ G D  LD+AV  VP +Y+ L Q P +   +  F++++ +L+
Sbjct: 380 SRYEDTRDLRLLGGYQRGSDQTLDQAVDLVPHVYEHLVQHPEEGPCKQPFEDLSARLK 437


>gi|150388191|ref|YP_001318240.1| ATP synthase F1, alpha subunit [Alkaliphilus metalliredigens QYMF]
 gi|166990351|sp|A6TK63|ATPA_ALKMQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149948053|gb|ABR46581.1| ATP synthase F1, alpha subunit [Alkaliphilus metalliredigens QYMF]
          Length = 505

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/433 (24%), Positives = 180/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K       V   G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSIIQEQIKRYENKLEVKDVGTVIQVGDAIARIHGLEK-CMAGELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  ++I  GD V   GR   +       GRV+N+LG+PID
Sbjct: 59  --VYGMALNLEEDNVGCVLLGSDDKIKEGDTVKRTGRIVEVPVGEALLGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D   +I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QTDKYRDIERVAPGIIARKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +       I   +G++   V +  +    +     +++V +T+ E   L+
Sbjct: 176 TAIAIDTIINQKHSDVICIYVAIGQKKSTVSQIQDTLEKNGAMEYTIIVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEEFMENGKHVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDERGGGSLTALPLIETQAGDVSAYIPTNVISITDGQIFLESELFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L   + ++ E   +     +   +D      + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLRLELAQYRE---LAAFAQFGSELDKETQARLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ   
Sbjct: 413 GERIIEMLKQPQF 425


>gi|148260676|ref|YP_001234803.1| F0F1 ATP synthase subunit alpha [Acidiphilium cryptum JF-5]
 gi|326403870|ref|YP_004283952.1| ATP synthase subunit alpha [Acidiphilium multivorum AIU301]
 gi|166201649|sp|A5FZ52|ATPA_ACICJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146402357|gb|ABQ30884.1| ATP synthase F1 subcomplex alpha subunit [Acidiphilium cryptum
           JF-5]
 gi|325050732|dbj|BAJ81070.1| ATP synthase subunit alpha [Acidiphilium multivorum AIU301]
          Length = 510

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 101/441 (22%), Positives = 181/441 (41%), Gaps = 26/441 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++++ +    +      V + G + S+      V  L+  V  G+ V      
Sbjct: 1   MEIRPAEISEILKKQIASFDTETDVAETGQVLSVGDGIARVFGLA-NVMAGEMVEFPNAG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G  + I  GD V    R   +       GRV++ALG PID
Sbjct: 60  --VQGMALNLENDNVGVVVFGDDKAIREGDTVTRTRRIVDVPVGKGLLGRVVDALGNPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + + +K P  + R+ V +  +TG++ ID   P+  GQR  V      GK
Sbjct: 118 GKGPIEATERRL-VETKAPGIIPRKSVHEPMQTGVKSIDALIPIGRGQRELVIGDRQTGK 176

Query: 175 STLLSMFARSDC----------FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + ++     +                I   VG++   V + +     +     S+V+ AT
Sbjct: 177 TAIIVDTFINQKPLNAQDDESKKLYCIYVAVGQKRSTVAQLVRTLEENGAMEYSIVIAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   ++ +AP T   + EYF   G + L++ D +++ A + R+++      P    YP
Sbjct: 237 ASEPAPMQFLAPYTGCAMGEYFRDNGMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERAAKMSDEFGAGSLTALPVIETQAGDISAYIPTNVISITDGQIFLETE 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D 
Sbjct: 357 LFFKGIRPAVNVGNSVSRVGSAAQIKAMKQVAGKIKLDLAQYRE---MAAFAQFASDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              K + +   + + LKQ   
Sbjct: 414 STQKLLARGARLTELLKQPQF 434


>gi|239832879|ref|ZP_04681208.1| ATP synthase F1, alpha subunit [Ochrobactrum intermedium LMG 3301]
 gi|239825146|gb|EEQ96714.1| ATP synthase F1, alpha subunit [Ochrobactrum intermedium LMG 3301]
          Length = 509

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+V+ AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|58039761|ref|YP_191725.1| F0F1 ATP synthase subunit alpha [Gluconobacter oxydans 621H]
 gi|81557054|sp|Q5FRC7|ATPA1_GLUOX RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|58002175|gb|AAW61069.1| ATP synthase alpha chain [Gluconobacter oxydans 621H]
          Length = 511

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 175/430 (40%), Gaps = 22/430 (5%)

Query: 6   ETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q    + +   V + G + SI      V  L+  V  G+ V  +G      G  + 
Sbjct: 10  DILKQQIASFDQVETVSETGTVLSIGDGIARVYGLT-NVMAGEMVEFEGTG--LKGMALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G G+ I  GD V        +       GRV++ LG PIDG   L   +
Sbjct: 67  LEADNVGVVLFGDGDSIREGDTVLRTKSVVEVPVGKGLLGRVVDGLGNPIDGRGPLTDVE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
                  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK      T++
Sbjct: 127 YRRA-EVKAPGIMPRQSVSEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIV 185

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +    +   D       I   VG++   V   +   +       S+VV AT+ ++  ++ 
Sbjct: 186 AQKPVNAEGDPKKSLYCIYVAVGQKRSTVANLVRTLIEHGAMEYSIVVAATASDAAPMQY 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP TA  + EYF   G + L+  D +++ A + R+++      P    +P  VF    R
Sbjct: 246 LAPYTACAMGEYFRDNGMHALVCYDDLSKQAVAYRQMSLLLRRPPAREAFPGDVFYLHSR 305

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++TA+  +     +    I  +V SI DG I L   L   G  P 
Sbjct: 306 LLERAAKMSDANGGGSLTALPVIETQAGDTAAYIPTNVISITDGQIFLETDLFYRGIRPA 365

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K + + 
Sbjct: 366 VNVGGSVSRVGSAAQIKAMKQVAGKIKLELAQYRE---MAAFSQFASDLDAATRKQLDRG 422

Query: 411 PIIYDFLKQS 420
             + + LKQ 
Sbjct: 423 ARLVELLKQP 432


>gi|294851039|ref|ZP_06791715.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
 gi|294821682|gb|EFG38678.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
          Length = 509

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVACRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|227823628|ref|YP_002827601.1| F0F1 ATP synthase subunit alpha [Sinorhizobium fredii NGR234]
 gi|254808109|sp|C3M9S3|ATPA_RHISN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|227342630|gb|ACP26848.1| ATP synthase F1, alpha subunit [Sinorhizobium fredii NGR234]
          Length = 509

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIN-AKQRSRVDIKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   +G++   V +F++        + S++V AT
Sbjct: 176 TAIILDTILNQKAIHDNGPEGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNDDNGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|22550331|ref|NP_689366.1| ATP synthase F1 subunit alpha [Chaetosphaeridium globosum]
 gi|22416997|gb|AAM96596.1|AF494279_1 ATP synthase F1 subunit alpha [Chaetosphaeridium globosum]
          Length = 508

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 101/438 (23%), Positives = 183/438 (41%), Gaps = 28/438 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   L+ L E    N      V + G + S+      V  L++ +  G+ V      S  
Sbjct: 2   NAAELSSLLESRITNYYTKFQVDEVGRVVSVGDGIARVYGLNK-IQAGEMVEFA---SGV 57

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G  + +  + V I   G    I  GD+V   G    +       GRV++ALG PIDG  
Sbjct: 58  KGMALNLENENVGIVVFGNDTAIKEGDIVKRTGSIVDVPVGKELLGRVVDALGVPIDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG     + +  K P  ++R+ V +  +TG++ +D   P+  GQR  +      GK+ +
Sbjct: 118 PLG-HSSRIRVEVKAPGIISRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 176

Query: 178 LSMFARSDC-----------FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
                 +                 +   +G++   V + ++        + S++V AT+ 
Sbjct: 177 AIDTILNQKQLNASATSEKDKLYCVYVAIGQKRSTVAQLVKSLSEAGALEYSIIVAATAS 236

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L+ +AP +   +AEYF   G + L++ D +++ + + R++       P    +P  
Sbjct: 237 DPAPLQFLAPYSGCAMAEYFRDNGMHALIVYDDLSKQSVAYRQMCLLLRRPPGREAFPGD 296

Query: 286 VFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +KG  ++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 297 VFYLHSRLLERAAKMSNDKGAGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF 356

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 357 YRGIRPAINVGLSVSRVGSAAQMKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAST 413

Query: 404 DKAVHQVPIIYDFLKQSP 421
              +++   + + LKQ+ 
Sbjct: 414 QYLLNRGARLTEVLKQAQ 431


>gi|222087439|ref|YP_002545976.1| ATP synthase F1, alpha subunit [Agrobacterium radiobacter K84]
 gi|221724887|gb|ACM28043.1| ATP synthase F1, alpha subunit [Agrobacterium radiobacter K84]
          Length = 510

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 182/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 2   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 60  --IRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 118 GKGPINATRRSR-VDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 176

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        K S++V AT
Sbjct: 177 TAIILDTILNQKAIHDVGPDSEKLYCVYVAVGQKRSTVAQFVKVLEERGALKYSIIVAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A S R+++      P    YP
Sbjct: 237 ASDPAPMQFLAPFAGCAMGEYFRDNGMHALIGYDDLSKQAVSYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERAAKMNDELGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 357 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 414 ATQRLLNRGARLTELLKQPQF 434


>gi|296133046|ref|YP_003640293.1| flagellar protein export ATPase FliI [Thermincola sp. JR]
 gi|296031624|gb|ADG82392.1| flagellar protein export ATPase FliI [Thermincola potens JR]
          Length = 440

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 165/441 (37%), Positives = 247/441 (56%), Gaps = 18/441 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--N 58
           + K +  LA L      + +   G ++ I  +   V        LG+         D   
Sbjct: 4   LNKYISALANL------DPIKINGKVTQIIGLV--VESQGPSANLGELCYIYPNVGDCKL 55

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
             +V+    + + + P+G    I  G  V   G  F+I  S+   GRVI+ LG PIDG  
Sbjct: 56  KAEVVGFKENRILLMPLGDLTGIGPGCEVVATGHSFKIGVSSKMLGRVIDGLGNPIDGLG 115

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + + +    +    P  + R+R+ +    G++ +D       GQR+G+F+GSG+GKSTL
Sbjct: 116 PI-EWETEYPVSGPPPNPLERKRITEPLSVGVKAVDGLLTCGKGQRVGIFSGSGVGKSTL 174

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREVREF+ +D   + L++SVVVVATSD+  ++R    L
Sbjct: 175 LGMIARNTAADINVIALIGERGREVREFLEKDLGEEGLRRSVVVVATSDQPALVRLKGAL 234

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G +V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER
Sbjct: 235 VATSIAEYFRDQGKDVMLMMDSVTRFAMAQREVGLAVGEPPATRGYTPSVFALLPKLLER 294

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S    G IT + +VLVDGD+HN+PIAD+VR ILDGHIVL+R LA + +YP +D LAS
Sbjct: 295 SGTSR--HGTITGLYTVLVDGDDHNEPIADAVRGILDGHIVLSRDLAMQNQYPAIDILAS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+     S + +K    +  ++  + + +D+  IG Y  G +  +D A+ ++    +F
Sbjct: 353 VSRVMPDIVSEEHRKAAQEIKSILATYRDAKDLIDIGAYHKGSNPKIDYALSKLDDTLNF 412

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           LKQ   +      F E  + L
Sbjct: 413 LKQDVKEHYG---FNEALELL 430


>gi|291280261|ref|YP_003497096.1| F0F1-type ATP synthase subunit alpha [Deferribacter desulfuricans
           SSM1]
 gi|290754963|dbj|BAI81340.1| F0F1-type ATP synthase, alpha subunit [Deferribacter desulfuricans
           SSM1]
          Length = 502

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 182/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ ++  +N        + G + S       V  L      G+ V   G  
Sbjct: 1   MQIRAEEISKIIKEQIENFEQKAEMEEIGTVLSAGDGIAKVYGL-DNAMAGELVELSGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G V  +  D V I  +G  E I  GD+V   GR   +       GRV+N LG+PID
Sbjct: 59  --VYGIVFNLEEDNVGIVIMGEYEHIKEGDIVKRTGRIASVPVGPELVGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIDAKEYDV-IEKIAPGIVKRKPVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +     VI     +G++   V   ++          +++V AT+ +   L+
Sbjct: 176 TAVAIDTIINQKGQNVICVYVAIGQKRSTVARVVDTLEKHGAMDYTIIVAATASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + LLI D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAPFAGCTMGEYFRDRGQHALLIYDDLSKHATAYRQMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKFNDENGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETDLFYAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++   L   + ++ E   +     +   +D      +++
Sbjct: 356 AVNVGLSVSRVGGSAQIKAMKQVAGRLRLDLAQYRE---LAAFAQFGSDLDAATRAQLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 413 GEKLVEILKQGQYQPVPVE 431


>gi|254470885|ref|ZP_05084288.1| ATP synthase F1, alpha subunit [Pseudovibrio sp. JE062]
 gi|211960027|gb|EEA95224.1| ATP synthase F1, alpha subunit [Pseudovibrio sp. JE062]
          Length = 509

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 177/441 (40%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --IRGMALNLETDNVGVVIFGNDRDIKEGDTVKRTGAIVEVPVGKGLLGRVVDPLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIEATE-RRRVDVKAPGILPRKSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGK 175

Query: 175 ----------STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                        L            I   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPLHASDNEHDKLYCIYVAVGQKRSTVAQFVKALEDAGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP    T+ EYF     + ++  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPLQYLAPFAGTTMGEYFRDNSMHAVIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++ G  ++TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERSAKLNEDHGLGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSSAQVKAMKQVAGPIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              K +++   + + LKQ   
Sbjct: 413 TTQKLLNRGARLTELLKQPQF 433


>gi|288959335|ref|YP_003449676.1| F-type H+-transporting ATPase alpha chain [Azospirillum sp. B510]
 gi|288911643|dbj|BAI73132.1| F-type H+-transporting ATPase alpha chain [Azospirillum sp. B510]
          Length = 509

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 105/433 (24%), Positives = 175/433 (40%), Gaps = 22/433 (5%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           Q+A   ++  V + G + S+      V  L   V  G+ V   G      G  + +  D 
Sbjct: 15  QIANFGTEADVAEVGQVLSVGDGVARVHGL-DNVRAGEMVEFPGG---LQGMALNLETDN 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I   G    I  GD V   G    +       GRV++ LG PIDG   L        +
Sbjct: 71  VGIVIFGDDRGIKEGDTVKRTGTIVDVPVGRGLLGRVVDGLGNPIDGKGPLVDV-TRTRV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFAR 183
             K P  + R+ V +  +TG++ +D   P+  GQR  +      GK      T L+    
Sbjct: 130 EVKAPGIIPRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAVVIDTFLNQKPI 189

Query: 184 SDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
           +   D       I   VG++   V + ++          S+VV AT+ E   L+ +AP T
Sbjct: 190 NQGDDESKKLYCIYVAVGQKRSTVAQIVKTLEDAGAMEYSIVVAATASEPAPLQFLAPYT 249

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
             T+ E+F   G + L++ D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 250 GCTMGEFFRDNGMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 309

Query: 298 GPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                  GN   TA+  +     + +  I  +V SI DG I L   L  +G  P ++   
Sbjct: 310 AKMGDAHGNGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETGLFYKGIRPAINVGL 369

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A     K++  ++   + ++ E   +     +   +D    + + +   + +
Sbjct: 370 SVSRVGSAAQIKAMKQVAGTIKMELAQYRE---MAAFAQFASDLDASTQRLLARGARLTE 426

Query: 416 FLKQSPSDLSSED 428
            LKQ        +
Sbjct: 427 LLKQGQFQPLPVE 439


>gi|304407762|ref|ZP_07389413.1| ATP synthase F1, alpha subunit [Paenibacillus curdlanolyticus YK9]
 gi|304343245|gb|EFM09088.1| ATP synthase F1, alpha subunit [Paenibacillus curdlanolyticus YK9]
          Length = 504

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 109/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q  E Y   + VV  G + S+      V  L +    G+ +         +G  + + 
Sbjct: 12  LKQQIEQYKSEIQVVDVGTVISVGDGIARVHGL-ENAMQGELLEFSNG---VIGMALNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G  + I  GD V   GR   +       GRV+NALG+P+DG+  +     +
Sbjct: 68  ESNVGVVIMGQYKGIREGDQVKRTGRIMEVPVGEALLGRVVNALGEPVDGNGPINTT-AT 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
             I S  P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++  +
Sbjct: 127 RPIESPAPGVMARKSVFEPMQTGIKAIDAMIPVGRGQRELIIGDRQTGKTQIAIDTIVNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   VR  +E          ++VV A++ E   L  +AP T  ++ 
Sbjct: 187 KGNGVICIYVAIGQKQSTVRTVVESLRKQGALDYTIVVTASASEPSPLLYIAPYTGCSMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G +VL++ D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 247 EYFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLND 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P V+   SVSR+
Sbjct: 307 ELGGGSLTALPFIETQAGDISAYIPTNVISITDGQIFLESDLFYSGQRPAVNVGNSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   + ++ E   +     +   +D +    +++     + LKQ 
Sbjct: 367 GSSAQIKAMKKVAGTLKTDLAQYRE---LAAFAAFGSDLDKVTQSRLNRGERTLEILKQG 423

Query: 421 PS 422
            +
Sbjct: 424 IN 425


>gi|332188642|ref|ZP_08390358.1| ATP synthase F1, alpha subunit [Sphingomonas sp. S17]
 gi|332011310|gb|EGI53399.1| ATP synthase F1, alpha subunit [Sphingomonas sp. S17]
          Length = 509

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 180/447 (40%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ +D   N      V + G + S+      +  L   V  G+ V      
Sbjct: 1   MDIRAAEISKVIKDQIANFGTEAQVSETGQVLSVGDGIARIYGL-DNVQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD V   G    +       GRV++ LG PID
Sbjct: 59  --VQGMALNLEADNVGVVIFGSDAEIKEGDTVKRTGTIVDVPVGRGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIEATE-RRRVEVKAPGIIPRKGVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                   ++    +   D       I   VG++   V + ++    +     S+VV AT
Sbjct: 176 SAVAIDAFINQKTVNAGTDESKKLYCIYVAVGQKRSTVAQLVKTLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T   + EYF     + L++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQFLAPYTGTAMGEYFRDNAMHALIVFDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER        G  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDANGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFAGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ   +    +
Sbjct: 413 STQKLLNRGARLTELLKQPQFNPLPFE 439


>gi|86606753|ref|YP_475516.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. JA-3-3Ab]
 gi|110832068|sp|Q2JSW1|ATPA_SYNJA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|86555295|gb|ABD00253.1| ATP synthase F1, alpha subunit [Synechococcus sp. JA-3-3Ab]
          Length = 506

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 106/428 (24%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y++ + +   G +  +      +  L + V   + +  +      +G  + + 
Sbjct: 13  IKQQIEQYNQEMQISNVGTVLQVGDGIARIYGLEK-VMASELLEFEDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G  I  G +V   GR   I       GRV++ L  PIDG   +   +  
Sbjct: 69  EDNVGAVLIGSGRNIQEGSIVKATGRIASIPVGEALLGRVVDPLCNPIDGKGPIHCTETR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+TL      + 
Sbjct: 129 L-IESPAPGIVDRRSVYEPLQTGITAIDALIPIGRGQRELIIGDRQTGKTTLAVDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   + + +           S+VV A +D    L+ +AP    TIA
Sbjct: 188 KGQDVICIYVAIGQKQSNIAQVVNILSERGAMDYSIVVAAGADSPAPLQWLAPYCGATIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G + L++ D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYQGKHTLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V    ++ +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQANDVSAYIPTNVISITDGQIFLESDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+  S+   + ++   RD+     +   +D    K + +   + + LKQ 
Sbjct: 368 GSAAQTKAMKKVAGSIKVELAQY---RDLEAFAQFASDLDEATQKQLARGQRLQEILKQP 424

Query: 421 PSDLSSED 428
                S D
Sbjct: 425 QYSPLSLD 432


>gi|15889879|ref|NP_355560.1| F0F1 ATP synthase subunit alpha [Agrobacterium tumefaciens str.
           C58]
 gi|81591311|sp|Q8UC74|ATPA_AGRT5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|15157826|gb|AAK88345.1| ATP synthase alpha chain [Agrobacterium tumefaciens str. C58]
          Length = 509

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 181/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGNEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDRSIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINAAKRSR-VDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   +G++   V +F++        + S++V AT
Sbjct: 176 TAIILDTILNQKAIHDNGPDGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLSDEMGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 STQRLLNRGARLTELLKQPQF 433


>gi|126701093|ref|YP_001089990.1| ATP synthase subunit alpha [Clostridium difficile 630]
 gi|254977094|ref|ZP_05273566.1| ATP synthase alpha chain [Clostridium difficile QCD-66c26]
 gi|255094422|ref|ZP_05323900.1| ATP synthase alpha chain [Clostridium difficile CIP 107932]
 gi|255102679|ref|ZP_05331656.1| ATP synthase alpha chain [Clostridium difficile QCD-63q42]
 gi|255308500|ref|ZP_05352671.1| ATP synthase alpha chain [Clostridium difficile ATCC 43255]
 gi|255316174|ref|ZP_05357757.1| ATP synthase alpha chain [Clostridium difficile QCD-76w55]
 gi|255518835|ref|ZP_05386511.1| ATP synthase alpha chain [Clostridium difficile QCD-97b34]
 gi|255652014|ref|ZP_05398916.1| ATP synthase alpha chain [Clostridium difficile QCD-37x79]
 gi|255657424|ref|ZP_05402833.1| ATP synthase alpha chain [Clostridium difficile QCD-23m63]
 gi|260684989|ref|YP_003216274.1| ATP synthase subunit alpha [Clostridium difficile CD196]
 gi|260688647|ref|YP_003219781.1| ATP synthase subunit alpha [Clostridium difficile R20291]
 gi|296449020|ref|ZP_06890810.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP08]
 gi|296879843|ref|ZP_06903816.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP07]
 gi|306521756|ref|ZP_07408103.1| ATP synthase alpha chain [Clostridium difficile QCD-32g58]
 gi|123066473|sp|Q180W8|ATPA_CLOD6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115252530|emb|CAJ70373.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
           sector subunit alpha) [Clostridium difficile]
 gi|260211152|emb|CBA66595.1| ATP synthase alpha chain [Clostridium difficile CD196]
 gi|260214664|emb|CBE07290.1| ATP synthase alpha chain [Clostridium difficile R20291]
 gi|296262113|gb|EFH08918.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP08]
 gi|296429132|gb|EFH15006.1| ATP synthase F1 sector alpha subunit [Clostridium difficile NAP07]
          Length = 500

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 110/435 (25%), Positives = 189/435 (43%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +   KN      +   G + ++     +V  L + +  G+ +   G  
Sbjct: 1   MNLKPEEISSIIKQQIKNYENKVELTDTGSVLTVGDGIASVYGLEKAMS-GELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G  + +  ++V    +G   EI  GD+V   GR   +       GRV+N+LG+PID
Sbjct: 58  -EIYGMALNLEEEVVGAVILGDDSEIKEGDIVKRTGRIVEVPVGEALIGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  + S+ P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIAYTK-TRPVESEAPGIIDRRSVYEPLQTGIKSIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           +   + ++  +       I   +G++   + + +     G  L  ++VV AT+ ES  L+
Sbjct: 176 TSIVIDTILNQKGKDVICIYVAIGQKRSTIAQLVSSLEKGGALDYTIVVSATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIYLQPELFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VDP  SVSR+   A     KK+  +L     ++ E   +     +   +D    K + Q
Sbjct: 356 AVDPGISVSRVGGSAQIKAMKKVAGTLKLAYSQYRE---LAAFSQFGSDLDEDTKKRLAQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ     
Sbjct: 413 GERIVEILKQGEHQP 427


>gi|163869187|ref|YP_001610439.1| F0F1 ATP synthase subunit alpha [Bartonella tribocorum CIP 105476]
 gi|189081288|sp|A9IYX0|ATPA_BART1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161018886|emb|CAK02444.1| ATP synthase alpha chain [Bartonella tribocorum CIP 105476]
          Length = 511

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 187/443 (42%), Gaps = 29/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ ++  KN      V + G++ S+      V  L   V  G+ V      
Sbjct: 1   MDIRPSEISKILKEQIKNFDQKAEVSEIGWVLSVGDGIARVYGL-DNVQAGEMVAFPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --VRGMALNLEVDNVGVVIFGSDRDIREGDCVKRLGAIVDVPVGPALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + +    +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPLKETE-RRRVDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMF------------ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
           + +L                R       I   +G++   V +F++        + S++V 
Sbjct: 176 TAILLDTFLNQKPFHEKGAGREQDKVYCIYVAIGQKRSTVAQFVKVLEERGALEYSIIVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   L+ +APL    + EYF   G + L+  D +++ A + R+++      P    
Sbjct: 236 ATASDPAPLQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +
Sbjct: 356 TNLFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D    + +++   + + LKQ   
Sbjct: 413 DASTQRLLNRGARLTELLKQPQF 435


>gi|295697749|ref|YP_003590987.1| ATP synthase F1, alpha subunit [Bacillus tusciae DSM 2912]
 gi|295413351|gb|ADG07843.1| ATP synthase F1, alpha subunit [Bacillus tusciae DSM 2912]
          Length = 502

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 175/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V   G +  +      +  L+     G+ +         +G  + 
Sbjct: 10  ALIKQQIENYDAELEVYDVGTVIYVGDGIARIHGLA-NAMAGELLEFPNGQ---MGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEEDNVGCIVLGTVEGIKEGDQVKRTGRIVEVPVGEALIGRVVNPLGQPLDGRGPIETKE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 FR-PVESPAPGVIDRKSVHEPLQTGIKAIDAMVPIGRGQRELIIGDRQTGKTAIALDTII 184

Query: 184 SDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     V  I   +G++   V + +E          ++VVVA++ +   L  +AP     
Sbjct: 185 NQKGQNVVCIYVAIGQKQSTVAQVVETLRKHGAMEYTIVVVASASDPAPLLYLAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + L + D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMYNGGHALCVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SDERGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLESDLFYAGQRPAVNSGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  +   RD++    +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLAEY---RDLQAFTQFGSDLDKATLARLTRGERTMEILK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPQYQP 427


>gi|317486822|ref|ZP_07945638.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Bilophila wadsworthia 3_1_6]
 gi|316921985|gb|EFV43255.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Bilophila wadsworthia 3_1_6]
          Length = 438

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 158/426 (37%), Positives = 234/426 (54%), Gaps = 12/426 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYIC 73
           S   V   G +  +      +  +   V +G+  + +    D     +V+     +  + 
Sbjct: 16  STASVEVRGRVEQVVGTI--IRAVVPGVKVGELCILRNPWEDWTLRAEVVGFVKQVALLT 73

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G  + IS    V   G    +       GRV+N LG PIDG   L K      + +  
Sbjct: 74  PLGDLQGISPATEVIPTGEIHSVPVGEDLLGRVLNGLGDPIDGGPPL-KPRTHYPVYADP 132

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  M R+ +++    G+RV+D       GQR+G+FA +G GKSTLLS   +    D  ++
Sbjct: 133 PNPMLRKIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVL 192

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFI  D   +  KK+V+VV+TSD S + R  A  TA  +AEYF  +  +
Sbjct: 193 ALIGERGREVREFIENDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAVAEYFRDQHKS 252

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRF  + REI   +GE P  RG+P SVFS LP+L+ER G S+K  G+ITA+ 
Sbjct: 253 VLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPKLMERAGNSDK--GSITALY 310

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP +D  ASVSR+ +   + + KK
Sbjct: 311 TVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAIDVQASVSRVMNAIVTKEHKK 370

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
              +L  ++ +F E   +  IG Y+ G D   D A+ ++  +  FL+Q   + S    F+
Sbjct: 371 AAQALRKVLAKFAEVELLVQIGEYKKGSDKEADDALARINAVNAFLRQGLDEKS---TFE 427

Query: 432 EITKKL 437
           E  + L
Sbjct: 428 ETLQAL 433


>gi|154251916|ref|YP_001412740.1| ATP synthase F1 subunit alpha [Parvibaculum lavamentivorans DS-1]
 gi|171769589|sp|A7HT50|ATPA_PARL1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|154155866|gb|ABS63083.1| ATP synthase F1, alpha subunit [Parvibaculum lavamentivorans DS-1]
          Length = 509

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 101/432 (23%), Positives = 177/432 (40%), Gaps = 23/432 (5%)

Query: 6   ETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  +D+ ++  V + G + S+      V  L   V  G+ V   G      G  + 
Sbjct: 10  AILKQQIKDFGAEAQVSEIGQVLSVGDGIARVYGL-DNVEAGEMVEFPGG---VRGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G    I  GD V   G    I       GRV++ LG P+DG   + +G 
Sbjct: 66  LEEDNVGVVIFGSDRNIKEGDTVKRTGAIVDIPVGKGLLGRVVDPLGNPLDGKGPI-EGV 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK--------- 174
               +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK         
Sbjct: 125 ERRRVDVKAPGIIPRKSVHEPMQTGLKAIDALIPIGRGQRELIIGDRQTGKTAIAIDAIL 184

Query: 175 -STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
               L+     +     I   +G++   V +  +    +   + +++V AT+ +   L+ 
Sbjct: 185 NQKPLNQGDDENQKLYCIYVAIGQKRSTVAQIAKTLEENGALEYTIIVAATASDPAPLQF 244

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF     + L++ D +++ A + R+++      P    YP  VF    R
Sbjct: 245 LAPFAGCTLGEYFRDNAMHGLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 304

Query: 293 LLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E GN   TA+  +    ++ +  I  +V SI DG I L   L  +G  P 
Sbjct: 305 LLERAAKLNDENGNGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFYQGVRPA 364

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++   +   + ++ E   +     +   +D    + +++ 
Sbjct: 365 VNVGLSVSRVGSSAQIKAMKQVAGKIKGELAQYRE---MAAFAQFGSDLDAATQRLLNRG 421

Query: 411 PIIYDFLKQSPS 422
             + + LKQ   
Sbjct: 422 ARLTELLKQGQF 433


>gi|147678420|ref|YP_001212635.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Pelotomaculum thermopropionicum SI]
 gi|146274517|dbj|BAF60266.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Pelotomaculum thermopropionicum SI]
          Length = 446

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 162/428 (37%), Positives = 237/428 (55%), Gaps = 11/428 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYI 72
               L+   G ++ +  +   V  ++    +G+       G+      +V+        +
Sbjct: 16  KEARLLRLTGQVTRVIGLTVEVKGIN--ASIGEVCEITVPGEPEPVRAEVVGFRDGSTLL 73

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P+G  + I  G  V   GR F I       GRV+N LG+P+DG   +G    +  + ++
Sbjct: 74  MPLGELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPVGGRTENYPVDNR 133

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  + R+R+ +   TG+R +D       GQRIG+F+GSG+GKSTLL M +R    D  +
Sbjct: 134 PPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTLLGMVSRFSDADVNV 193

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I L+GERGREV +FIE  LG + L +SVVVVATS++  ++R      A  +AEYF  +G 
Sbjct: 194 IGLIGERGREVLDFIETDLGPEGLARSVVVVATSEQPALVRLKGAFVACAVAEYFRDQGR 253

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DSITRFA + RE+    GE P  +GY  SVF+ LPRLLER G S    G+ITA 
Sbjct: 254 DVLLMMDSITRFAMAQREVGLAIGEPPATKGYTPSVFALLPRLLERAGMSS--AGSITAF 311

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PI+D+VR ILDGHIVL+RSLA    +P VD L SVSRL     + + +
Sbjct: 312 FTVLVDGDDLNEPISDAVRGILDGHIVLSRSLAASNHFPAVDVLNSVSRLMPDITTEEHR 371

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
                L  L+  + +  D+  IG Y  G +  +D+A+     I  FL+Q   + +    F
Sbjct: 372 AWAGRLRDLLAAYRQAEDLINIGAYVAGSNPRVDEAIACYQDIVAFLRQDLKEHAR---F 428

Query: 431 QEITKKLQ 438
           +E    L+
Sbjct: 429 EETLAMLE 436


>gi|296532594|ref|ZP_06895299.1| ATP synthase F1 sector alpha subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296267085|gb|EFH13005.1| ATP synthase F1 sector alpha subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 511

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 178/441 (40%), Gaps = 26/441 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++++ +           V + G + ++      V  L Q V  G+ V      
Sbjct: 1   MEIRPAEISEILKQQIAGFDAEANVAEVGTVLTVGDGIARVYGL-QNVMAGELVEFPSAG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V        +       GRV++ LG PID
Sbjct: 60  --LKGMALNLETDNVGVVIFGDDRSIREGDTVSRTRDIVSVPVGPGLLGRVVDGLGNPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L     ++ +  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK
Sbjct: 118 GKGPLTNVSPAL-VEVKAPGIIPRKSVHEPMQTGIKAIDALIPIGRGQRELVIGDRQTGK 176

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T+L+    +   D       I   +G++   V + +     +   + S++V AT
Sbjct: 177 TAVIVDTILNQKPINAGTDESKKLYCIYVAIGQKRSTVAQLVRTLEENGALEYSIIVAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T   + EYF   G + ++  D +++ A + R+++      P    YP
Sbjct: 237 ASDPAPMQYLAPYTGCAMGEYFRDSGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E+G  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERAAKMNDEQGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D 
Sbjct: 357 LFFKGIRPAVNVGLSVSRVGSAAQIKAMKQVAGKIKLELAQYRE---MAAFAQFASDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
                + +   + + LKQ   
Sbjct: 414 STQALLARGARLTELLKQPQF 434


>gi|94986982|ref|YP_594915.1| type III secretion system ATPase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731231|emb|CAJ54594.1| Type III secretion component protein SctN [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 438

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 169/440 (38%), Positives = 242/440 (55%), Gaps = 14/440 (3%)

Query: 5   LETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLG 60
           LE +A L E+  +N   V   G +  +      +  +   V +G+    +    N     
Sbjct: 3   LEYIASLLEEAVQNTSPVEVRGRVEQVIGTI--IRAVVPGVKIGELCELRNPWDNWTLQA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +V+     +  + P+G  + IS    V   G    I       GRV+N LG+PIDG   L
Sbjct: 61  EVVGFVKHVALLTPLGDLQGISPSTEVIPTGMVHAIPVGRELLGRVLNGLGEPIDGKAPL 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +      + +  P  M R+ +EK    G+RV+D       GQR+G+FA +G GKSTLLS
Sbjct: 121 -RLRTYYPVYADPPNPMLRRIIEKPISLGLRVLDGILTCGEGQRMGIFAAAGGGKSTLLS 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
              +    D  I++L+GERGREVREFI  D   + LK+SV+VV+TSD S + R  +  TA
Sbjct: 180 SIIKGTTADVCILALIGERGREVREFIEHDLGAEGLKRSVLVVSTSDRSSMERLKSAYTA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G  VLL++DS+TRF  ++REI   SGE P  RG+P SVFS LP+L+ER G
Sbjct: 240 TAIAEYFRDQGKKVLLLMDSVTRFGRALREIGLASGEPPTRRGFPPSVFSSLPKLMERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S+K  G+ITA+ +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP VD LASVS
Sbjct: 300 NSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAVDVLASVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +   + + K+    L   + ++ E   +  IG Y+ G D   D A+     I  FL+
Sbjct: 358 RVMNAIVTKEHKENAGKLRKYLAKYAEVELLVQIGEYKAGNDPAADDAIKHNKGINAFLQ 417

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q   + S    F++  + L+
Sbjct: 418 QGLDEKS---TFEQTLQALK 434


>gi|220929465|ref|YP_002506374.1| ATPase FliI/YscN [Clostridium cellulolyticum H10]
 gi|219999793|gb|ACL76394.1| ATPase FliI/YscN [Clostridium cellulolyticum H10]
          Length = 437

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 163/428 (38%), Positives = 245/428 (57%), Gaps = 9/428 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYIC 73
            SK  +   G +S +     T+      V +GD   +H    S    +V+    + V + 
Sbjct: 14  KSKEYIDYIGKVSKVVG--LTIESDGPQVSIGDLCNIHIIGGSKLKAEVVGFKDEKVLLM 71

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    I  G  V   G   +++      GRV++ LG PID   SL +     +  +K 
Sbjct: 72  PLGEMTGIGPGSTVSANGDILKVAVGPQLVGRVLDGLGNPIDDKGSL-QSKHYYKTDNKP 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+R+ +    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I
Sbjct: 131 PNPLTRKRISEPLPLGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMVARNTKADINVI 190

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+  D   + L +SVVVVATSD+  ++R    + A  IAEYF   G +
Sbjct: 191 ALIGERGREVREFLERDLTDEGLARSVVVVATSDQPALIRLKGAMVATAIAEYFRDCGKD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TR+A + RE+  + GE PV+RGY  SVFS  P+LLER G S+K  G+IT + 
Sbjct: 251 VLLLMDSLTRYAMAQREVGLSIGEPPVSRGYTPSVFSVFPKLLERAGTSDK--GSITGLY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+  +P+ D+ R ILDGHIVL+RS+A +  YP +D LASVSR+       + KK
Sbjct: 309 TVLVDGDDLTEPVTDTARGILDGHIVLSRSMANKNHYPAIDVLASVSRVMGDIIDKEHKK 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVF 430
             + +  ++    ++ D+  IG Y  G +  +D A+  +  I  FL+Q   + +S ED+ 
Sbjct: 369 SANEIKKVMAVHRDSEDLINIGAYVKGSNEKIDYAIECIEDITSFLQQETDEKVSFEDIH 428

Query: 431 QEITKKLQ 438
            ++   L+
Sbjct: 429 SQVLSLLK 436


>gi|218887523|ref|YP_002436844.1| type III secretion system ATPase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758477|gb|ACL09376.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 438

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 160/440 (36%), Positives = 240/440 (54%), Gaps = 14/440 (3%)

Query: 5   LETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLG 60
            E +  L E+  +S   V   G +  +      +  +   V +G+  + +   +N     
Sbjct: 3   FEYIGSLLEEAVHSGPTVEVRGRVEQVVGTI--IRAVVPGVKVGELCILRNPWENWTLRA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+     +  + P+G  + +S    V   G    I       GRV++ LG+P+DG   L
Sbjct: 61  EVVGFVKQVALLTPLGDLQGVSPATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPL 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K      + ++ P  M R+ +++    G+RV+D       GQR+G+FA +G GKSTLLS
Sbjct: 121 -KPRTRYPVYAQPPNPMQRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLS 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
              +    D  +++L+GERGREVREFI  D   +  KK+V+VV+TSD S + R  A  TA
Sbjct: 180 SIIKGCSADVCVLALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +  +VLL++DS+TRF  + REI   +GE P  RG+P SVFS LPRL+ER G
Sbjct: 240 TAIAEYFRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S+K  G+ITA+ +VLV+GD+  +PIAD  RSILDGHIVL+R LA    YP +D  ASVS
Sbjct: 300 NSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +     + K     L  ++ ++ E   +  IG Y+ G D   D+A+ +V  +  FL+
Sbjct: 358 RVMNAIVDKEHKAAAQKLRKVLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLR 417

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q   + S    F +    L+
Sbjct: 418 QGLDERSG---FDDTLAALR 434


>gi|325293993|ref|YP_004279857.1| ATP synthase F1, subunit alpha [Agrobacterium sp. H13-3]
 gi|325061846|gb|ADY65537.1| ATP synthase F1, alpha subunit [Agrobacterium sp. H13-3]
          Length = 509

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 181/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGNEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --VRGMALNLEADNVGVVIFGSDRAIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINAAKRSR-VDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   +G++   V +F++        + S+++ AT
Sbjct: 176 TAIILDAILNQKAIHDNGPEGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLSDEMGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 STQRLLNRGARLTELLKQPQF 433


>gi|108796773|ref|YP_636448.1| CF1 alpha subunit of ATP synthase [Staurastrum punctulatum]
 gi|146322298|sp|Q32RS8|ATPA_STAPU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|61393541|gb|AAX45682.1| CF1 alpha subunit of ATP synthase [Staurastrum punctulatum]
          Length = 512

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 186/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRKQIEQYNQEVKVVNIGTVLQVGDGIARIYGLDK-VMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NALG+PIDG   +   +
Sbjct: 67  LESDNVGAVLMGDGLNIQEGSSVKATGKIAQIPVSDGYLGRVVNALGRPIDGKGDIPASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 YRL-IESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   + + +  +        +++V  T+D    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSIAQVLNTFEERGAMDYTIIVAETADAPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYRGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSP 421
           QS 
Sbjct: 423 QSQ 425


>gi|158425751|ref|YP_001527043.1| F0F1 ATP synthase subunit alpha [Azorhizobium caulinodans ORS 571]
 gi|172047827|sp|A8HS15|ATPA_AZOC5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158332640|dbj|BAF90125.1| ATP synthase F1 alpha subunit [Azorhizobium caulinodans ORS 571]
          Length = 510

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 182/442 (41%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  +N      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKEQIQNFGREAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  G  V   G    +       GRV++ALG PID
Sbjct: 59  --TRGMALNLEIDNVGVVIFGSDRDIKEGQTVKRTGAIVDVPVGRGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIEATE-RRRVDVKAPGIIPRKSVHEPMQTGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   VG++   V +F++        + S+VV A
Sbjct: 176 TAVALDAILNQKPLNVAGAPESQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP     + EYF   G + L+I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQFLAPFAGTAMGEYFRDNGMHALIIHDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E G  ++TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLES 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D
Sbjct: 356 DLFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGKIKGELAQYRE---LAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               K +++   + + LKQS  
Sbjct: 413 ASTQKLLNRGARLTELLKQSQF 434


>gi|85709190|ref|ZP_01040256.1| ATP synthase subunit A [Erythrobacter sp. NAP1]
 gi|85690724|gb|EAQ30727.1| ATP synthase subunit A [Erythrobacter sp. NAP1]
          Length = 509

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 100/447 (22%), Positives = 185/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++++ +D   N      V + G + S+      +  L + V  G+ V      
Sbjct: 1   MEIRAAEISKVIKDQIANFGTEAQVSEVGTVLSVGDGIARIHGLDK-VQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD V        +       GRV++ALG PID
Sbjct: 59  --VQGMALNLEADNVGVVIFGSDAEIKEGDTVKRTETIVDVPVGKALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  +  K P  + R+ V +  ++G++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIETTERSR-VEVKAPGIIPRESVSEPVQSGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +      +                +   VG++   V + ++    +     S+VV AT
Sbjct: 176 TAVAIDTFINQKGVNASDDEGKKLYCVYVAVGQKRSTVAQIVKQLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T   + E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGCAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSE--KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER       +  G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNKAEGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGGAAQTKAMKKVSGSMKLDLAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ   +    +
Sbjct: 413 ATQKLLNRGARLTELLKQKQFNPMPFE 439


>gi|118589941|ref|ZP_01547345.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614]
 gi|118437438|gb|EAV44075.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614]
          Length = 448

 Score =  327 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 206/411 (50%), Positives = 286/411 (69%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G ++ ++S    V+ LS+ VCLGD V  +G++    G++IR++   V I P+    
Sbjct: 27  VKLSGRVTQVSSESIRVSGLSRVVCLGDLVQFEGRSGVRQGEIIRLDQKDVVIKPLERVT 86

Query: 80  EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +I +G +    G   I P   W GR++NALG+PIDG   L  G  +  +    PPAMNR 
Sbjct: 87  DIGIGSVASVMGGLAIHPDMSWRGRIVNALGEPIDGAGPLAHGVEAFLLDRAPPPAMNRS 146

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           ++ +G +TG+RVID+FTPLC GQR+GVFAGSG+GKSTLL M A    FD V++ LVGERG
Sbjct: 147 KISEGVRTGVRVIDLFTPLCVGQRVGVFAGSGVGKSTLLGMLAGFGDFDTVVVGLVGERG 206

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REVREFI+D LG+ L  SVVV +T DES + R++AP TA+++AEYF ++G  VLLILDS 
Sbjct: 207 REVREFIDDILGETLAHSVVVASTGDESAMQRRLAPKTAMSVAEYFRAQGHKVLLILDSA 266

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFAH+ R++A  +GE PVARG+P SVF++L RL+ER GP    +G+IT + SVLVDGD+
Sbjct: 267 TRFAHAARDVALAAGEPPVARGFPPSVFADLARLIERAGPGSSGEGSITGIFSVLVDGDD 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HNDP++D++R +LDGHIVL+R +AE G YPPV  L S SRLAD+AW+ D++ L+  +  L
Sbjct: 327 HNDPVSDAIRGLLDGHIVLDRQIAESGHYPPVSVLKSTSRLADRAWTQDQQDLIHRIKGL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           I  +E+T+D+RL+GG++   D  L+KA   VP IY+ L+Q    ++  D F
Sbjct: 387 ISYYEDTKDLRLMGGFQTAGDEKLEKACRLVPRIYEALRQRSDQVAPSDPF 437


>gi|326387007|ref|ZP_08208617.1| F0F1 ATP synthase subunit alpha [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326208188|gb|EGD58995.1| F0F1 ATP synthase subunit alpha [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 509

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 187/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++++ +D   +      V + G + S+      +  L + V  G+ V      
Sbjct: 1   MEIRAAEISKVIKDQIASFGTEAQVSEVGSVLSVGDGIARIHGLDK-VQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD V   G     P      GRV++ALG PID
Sbjct: 59  --VKGMALNLEADNVGVVIFGTDSEIKEGDTVRRTGTIVDVPTGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIMYAE-RRRVELKAPGIIPRKSVHEPVQTGLKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T ++    +   D       I   VG++   V + +     +   + S+V+ AT
Sbjct: 176 TAVAIDTFINQKPANTGSDEGKKLYCIYVAVGQKRSTVAQIVRQLEENGALEYSIVIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T   + E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGCAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDNGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETG 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ      + +
Sbjct: 413 STQKLLNRGARLTELLKQPQFSPLAFE 439


>gi|223931089|ref|YP_002586951.1| ATP synthase CF1 alpha subunit [Syntrichia ruralis]
 gi|219562303|gb|ACL27634.1| ATP synthase CF1 alpha subunit [Syntrichia ruralis]
          Length = 507

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 190/424 (44%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  EDYS+ + VV  G +  +      +  L + V  G+ V  +     ++G  + 
Sbjct: 11  SIIRKQIEDYSQEIKVVNVGTVLQVGDGIARIYGLDK-VMAGELVEFE---DSSIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGVVLMGDGLTIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESSAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + ++      + ++VV  T++    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVNNFEERGALEYTIVVAETANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|20807128|ref|NP_622299.1| F0F1 ATP synthase subunit alpha [Thermoanaerobacter tengcongensis
           MB4]
 gi|254479266|ref|ZP_05092609.1| ATP synthase F1, alpha subunit [Carboxydibrachium pacificum DSM
           12653]
 gi|81590746|sp|Q8RC17|ATPA_THETN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|20515623|gb|AAM23903.1| F0F1-type ATP synthase alpha subunit [Thermoanaerobacter
           tengcongensis MB4]
 gi|214034804|gb|EEB75535.1| ATP synthase F1, alpha subunit [Carboxydibrachium pacificum DSM
           12653]
          Length = 506

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 184/431 (42%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             LA+  +++  ++  Q  GY+         +  L   V  G+ V  +   S  +G V+ 
Sbjct: 10  SVLAEKIKNFDFSVETQEIGYVIQSGDGIARIYGLDNAV-YGEMVEFE---SGVVGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G  E++  GD+V   GR   +       GRV+N LG+PIDG   + + +
Sbjct: 66  LEEDTVGVVVLGDPEKVKEGDVVKRTGRIMEVPVGKGLLGRVVNPLGEPIDGKGPI-EYE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  PP + RQ V    +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 125 GKRPIESPAPPIVRRQPVNTPLQTGILAIDSMIPIGRGQRELIIGDRQTGKTAIAVDTII 184

Query: 184 S--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +  D     I   +G++   V   +           + VV AT+ ES  L+ +AP     
Sbjct: 185 NQKDKGVYCIYVAIGQKASTVASVVNTLEKYGAMEYTTVVAATASESAALQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E+F  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEHFMYQGKDVLVVYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERSARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDEYGGGSLTALPIVETQAGDISAYIPTNVISITDGQIYLESELFYSGIRPAINVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + ++ E +     G     +D    + + Q   I +  K
Sbjct: 365 RVGGAAQIKAMKKVAGRLRLELSQYRELQVFARFG---TDLDKATLEVLRQGERIVEITK 421

Query: 419 QSPSD-LSSED 428
           Q     ++ ED
Sbjct: 422 QPQYQPMAVED 432


>gi|322383104|ref|ZP_08056931.1| F0F1 ATP synthase subunit alpha-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321152766|gb|EFX45392.1| F0F1 ATP synthase subunit alpha-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 505

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 104/440 (23%), Positives = 184/440 (41%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL------VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           M    + ++ L +    N       VV  G +  I      V  L +    G+ +     
Sbjct: 1   MSIRPDEISTLIKQQIVNYKSTDLDVVDVGTVIQIGDGIARVHGL-ENAMAGELLEFSNG 59

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPI 113
               +G  + +  + V I  +G   +I  GD V   GR   +       GRV+N LG+P+
Sbjct: 60  ---VMGMALNLEENNVGIVILGPYTDIREGDQVKRTGRIMEVPVGEELLGRVVNPLGQPL 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    + +      I S  P  M R+ V +  +TG++ ID   P+  GQR  +      G
Sbjct: 117 DERGPI-ETKQYRPIESPAPGVMARKSVHEPMQTGMKAIDSMVPIGRGQRELIIGDRQTG 175

Query: 174 KSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           K+++      +   +  K +   +G++   V   +E          +++V A++ E   L
Sbjct: 176 KTSIAIDTIINQKGNGMKCVYVAIGQKQSTVANVVETLRRHGALDYTIIVTASASEPSPL 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + EYF  KG++VL++ D +++ A + RE++      P    YP  VF   
Sbjct: 236 LYLAPYAGCAMGEYFMYKGEHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +    ++ +  I  +V SI DG I L   L   G+ 
Sbjct: 296 SRLLERAAKLNDELGGGSLTALPFIETQANDVSAYIPTNVISITDGQIFLESDLFYSGQR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A     KK+  +L   + ++ E   +     +   +D      ++
Sbjct: 356 PAVNVGNSVSRVGGSAQIKAMKKVAGTLRLDLAQYRE---LAAFSQFGSDLDKSTLARLN 412

Query: 409 QVPIIYDFLKQSPSDLSSED 428
           +     + LKQ  ++    +
Sbjct: 413 RGERTLEILKQGVNEPLPVE 432


>gi|125972989|ref|YP_001036899.1| flagellar protein export ATPase FliI [Clostridium thermocellum ATCC
           27405]
 gi|256004786|ref|ZP_05429761.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 2360]
 gi|281417200|ref|ZP_06248220.1| flagellar protein export ATPase FliI [Clostridium thermocellum
           JW20]
 gi|125713214|gb|ABN51706.1| type III secretion system ATPase, FliI/YscN [Clostridium
           thermocellum ATCC 27405]
 gi|255991236|gb|EEU01343.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 2360]
 gi|281408602|gb|EFB38860.1| flagellar protein export ATPase FliI [Clostridium thermocellum
           JW20]
 gi|316940775|gb|ADU74809.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 1313]
          Length = 437

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 156/424 (36%), Positives = 243/424 (57%), Gaps = 9/424 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYIC 73
           +++ +   G +S +     T+      V +G+        +N     + +    + V + 
Sbjct: 15  NRDFIEYTGKVSKVVG--LTIESNGPEVNIGEICKINALRENKVISAEAVGFRDNKVLLM 72

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    I  G  V        +       GRVI+ +G+PIDG   +   + +  + +K 
Sbjct: 73  PLGDMNGIGPGSKVVATRDYLSVGVGNALIGRVIDGMGRPIDGKGEIV-TETTYPVENKP 131

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R R+++    G++ ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I
Sbjct: 132 PHPLKRNRIKEPLPLGVKTIDGLLTVGKGQRVGIFAGSGVGKSTLIGMIARNTKADVNVI 191

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFI +D   + LK+SVVVVATSD+  ++R    L A  IAEYF  +G +
Sbjct: 192 ALIGERGREVREFIEKDLKEEGLKRSVVVVATSDQPALIRLKGALMATAIAEYFRDQGKD 251

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA + REI  + GE PV+RGY  SVFS +P+LLER G S+   G+IT + 
Sbjct: 252 VLLLMDSLTRFAMAQREIGLSIGEPPVSRGYTPSVFSIMPKLLERAGNSQS--GSITGLY 309

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+  +P+ D+ R ILDGHIVL+R+LA + +YP +D LASVSR+       + +K
Sbjct: 310 TVLVDGDDLTEPVTDTARGILDGHIVLSRNLANKNQYPAIDVLASVSRVMPDIVDDEHQK 369

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           + + +   +  + E  D+  +G Y  G +  +D A+  +  I +F+KQ   +  S +   
Sbjct: 370 IANDIKKTMAIYREAEDLINVGAYAKGSNEKIDYAIEVIDKIQEFIKQGVHERYSYEETI 429

Query: 432 EITK 435
            + K
Sbjct: 430 NLMK 433


>gi|150398121|ref|YP_001328588.1| F0F1 ATP synthase subunit alpha [Sinorhizobium medicae WSM419]
 gi|166201680|sp|A6UDM3|ATPA_SINMW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|150029636|gb|ABR61753.1| ATP synthase F1, alpha subunit [Sinorhizobium medicae WSM419]
          Length = 509

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIN-AKQRARVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   +G++   V +F++        + S++V AT
Sbjct: 176 TAIILDTILNQKAIHDNGPEGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++  ++ +AP    T+ EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDAAPMQYLAPFAGCTMGEYFRDSGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNDDNGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|110635545|ref|YP_675753.1| F0F1 ATP synthase subunit alpha [Mesorhizobium sp. BNC1]
 gi|118573481|sp|Q11DD7|ATPA_MESSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110286529|gb|ABG64588.1| ATP synthase F1 subcomplex alpha subunit [Chelativorans sp. BNC1]
          Length = 509

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEVDNVGVVIFGADRDIKEGDTVKRTGAIVEVPVGPGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQATE-RRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T L+    +D  D       I   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPLNDGDDESQKLYCIYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + ++  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCAMGEYFRDNGKHAVIAYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G+   TA+  +    ++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKMNDDNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGVRPAVNVGLSVSRVGSAAQVKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|298293439|ref|YP_003695378.1| ATP synthase F1 subunit alpha [Starkeya novella DSM 506]
 gi|296929950|gb|ADH90759.1| ATP synthase F1, alpha subunit [Starkeya novella DSM 506]
          Length = 509

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 104/436 (23%), Positives = 186/436 (42%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      +  L   V  G+ V  +       G
Sbjct: 12  LKEQIKNFGQEAE------VSEVGQVLSVGDGIARIYGL-DNVQAGEMVEFENG---TRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + + +D V +   G   EI  G  V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLEIDNVGVVIFGSDREIKEGQTVKRTGAIVDVPVGKGLLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK     
Sbjct: 122 EATE-RRRVDVKAPGIIPRKSVHEPMQTGLKAIDALIPIGRGQRELIIGDRQTGKTAIAL 180

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+    +   D       +   VG++   V +F++        + S+VV AT+ ++ 
Sbjct: 181 DTILNQKPINQGTDEKAKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAATASDAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP     + E+F   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQFLAPFAGTAMGEFFRDNGMHALIIHDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKLNDENGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLESDLFFQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K 
Sbjct: 361 IRPAVNVGLSVSRVGSSAQIKAMKQVAGKIKGELAQYRE---LAAFAQFGSDLDAATQKL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQS  
Sbjct: 418 LNRGARLTELLKQSQF 433


>gi|254456379|ref|ZP_05069808.1| ATP synthase F1, alpha subunit [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083381|gb|EDZ60807.1| ATP synthase F1, alpha subunit [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 511

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 105/440 (23%), Positives = 186/440 (42%), Gaps = 26/440 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   + ++ ++  KN      V + G + S+      +  L   V  G+ V     +
Sbjct: 1   MEINPSEVTKILKEQIKNFGDKAEVTEVGQVLSVGDGIARIYGL-DNVQAGEMVEFVDGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  + V +   G    I  GD+V   G            GRV++ LG PID
Sbjct: 60  K---GMALNLESENVGVVIFGDDRNIKEGDVVKRTGNIVDTPVGKELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L K      +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGALDKSVQKSRVEVKAPGIIPRQSVSEPMQTGLKSIDSLVPVGRGQRELIIGDRQTGK 176

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                  +++    ++  D       +   +G++   VR+  +          + +V AT
Sbjct: 177 TAVAIDAIINQKKINESGDEKQKLYCVYVAIGQKRSTVRQIQKTLEEAGAMEYTTIVAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S  L+ +AP T   + EYF   G + L+I D +++ A + R+++      P    YP
Sbjct: 237 ASDSAPLQFLAPYTGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +   G + +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERAAKLSDEHGGGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETE 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 357 LFNQGIRPAINVGLSVSRVGSSAQTKAMKKVSGSMKLELAQYRE---MAAFAQFGSDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              + +++   + + LKQ  
Sbjct: 414 STQQLLNRGSKLTELLKQKQ 433


>gi|49476189|ref|YP_034230.1| F0F1 ATP synthase subunit alpha [Bartonella henselae str.
           Houston-1]
 gi|81696108|sp|Q6G1W7|ATPA_BARHE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49238997|emb|CAF28297.1| ATP synthase alpha chain [Bartonella henselae str. Houston-1]
          Length = 511

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 182/443 (41%), Gaps = 29/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ ++  KN      V + G++ S+      V  L   V  G+ V      
Sbjct: 1   MDIRPSEISKILKEQIKNFDQKAEVSEIGWVLSVGDGIARVYGL-DNVQAGEMVSFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --VRGMALNLEIDNVGVVIFGSDRDIREGDCVKRLGAIVEVPVGPALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +    +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPLKATEYRR-VDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGK 175

Query: 175 ------------STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
                                       I   +G++   V +F++        + S++V 
Sbjct: 176 TAILLDAFLNQKPFHEKDAGNEKDKVYCIYVAIGQKRSTVAQFVKVLEERGALEYSIIVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +APL    + EYF   G + L+  D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +
Sbjct: 356 TNLFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D    + +++   + + LKQ   
Sbjct: 413 DASTQRLLNRGARLTELLKQPQF 435


>gi|224179485|ref|YP_002601009.1| CF1 alpha subunit of ATP synthase [Monomastix sp. OKE-1]
 gi|217314528|gb|ACK36871.1| CF1 alpha subunit of ATP synthase [Monomastix sp. OKE-1]
          Length = 507

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 189/424 (44%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y++ + +   G + ++      +  L + V  G+ +  Q      +G  + 
Sbjct: 11  SIIRQQIESYNQEVKISNVGTVLNVGDGIARIYGLEK-VMAGELLEFQDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  GD V   G+  +I     + GRV++AL +PIDG  ++ K D
Sbjct: 67  LETDNVGAVLMGDGLKIQEGDSVKATGKIAQIPVGEAFLGRVVDALARPIDGKGAI-KAD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MF 181
            +  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +  + 
Sbjct: 126 ATRLIESPAPGIISRRSVYEPLQTGLVAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVT 240
            ++      +   +G++   V + +         K +++V   +D    L+ +AP T   
Sbjct: 186 NQNGENVVCVYVAIGQKASSVAQIVTTLQERGAMKYTIIVAENADAPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRHTLVIYDDLSKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  +   G + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SNALGEGSMTALPVIETQGGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGTLKLELAQFAELE---AFSQFASDLDQATQNQLARGVRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|167463133|ref|ZP_02328222.1| F0F1 ATP synthase subunit alpha [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 505

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 103/440 (23%), Positives = 184/440 (41%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL------VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           M    + ++ L +    N       VV  G +  I      V  L +    G+ +     
Sbjct: 1   MSIRPDEISTLIKQQIVNYKSTDLDVVDVGTVIQIGDGIARVHGL-ENAMAGELLEFSNG 59

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPI 113
               +G  + +  + V I  +G   +I  GD V   GR   +       GRV+N LG+P+
Sbjct: 60  ---VMGMALNLEENNVGIVILGPYTDIREGDQVKRTGRIMEVPVGEELLGRVVNPLGQPL 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    + +      I S  P  + R+ V +  +TG++ ID   P+  GQR  +      G
Sbjct: 117 DERGPI-ETKQYRPIESPAPGVIARKSVHEPMQTGMKAIDSMVPIGRGQRELIIGDRQTG 175

Query: 174 KSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           K+++      +   +  K +   +G++   V   +E          +++V A++ E   L
Sbjct: 176 KTSIAIDTIINQKGNGMKCVYVAIGQKQSTVANVVETLRRHGALDYTIIVTASASEPSPL 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + EYF  KG++VL++ D +++ A + RE++      P    YP  VF   
Sbjct: 236 LYLAPYAGCAMGEYFMYKGEHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +    ++ +  I  +V SI DG I L   L   G+ 
Sbjct: 296 SRLLERAAKLNDELGGGSLTALPFIETQANDVSAYIPTNVISITDGQIFLESDLFYSGQR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A     KK+  +L   + ++ E   +     +   +D      ++
Sbjct: 356 PAVNVGNSVSRVGGSAQIKAMKKVAGTLRLDLAQYRE---LAAFSQFGSDLDKSTLARLN 412

Query: 409 QVPIIYDFLKQSPSDLSSED 428
           +     + LKQ  ++    +
Sbjct: 413 RGERTLEILKQGVNEPLPVE 432


>gi|148558963|ref|YP_001259640.1| F0F1 ATP synthase subunit alpha [Brucella ovis ATCC 25840]
 gi|166201652|sp|A5VSE3|ATPA_BRUO2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148370220|gb|ABQ60199.1| ATP synthase F1, alpha subunit [Brucella ovis ATCC 25840]
          Length = 509

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G +  +      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLFVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|13473458|ref|NP_105025.1| F0F1 ATP synthase subunit alpha [Mesorhizobium loti MAFF303099]
 gi|81779154|sp|Q98EV6|ATPA_RHILO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|14024207|dbj|BAB50811.1| ATP synthetase alpha [Mesorhizobium loti MAFF303099]
          Length = 509

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGREAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGADRDIKEGDTVKRTGAIVDVPVGPGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIKATE-RKRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S++V AT
Sbjct: 176 TAIILDTMLNQKSVHDNGPEKEKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP    T+ EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCTMGEYFRDNGMHALISYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +    ++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDDLGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGSRLTELLKQPQF 433


>gi|34501429|ref|NP_904216.1| ATP synthase CF1 alpha subunit [Physcomitrella patens subsp.
           patens]
 gi|75294050|sp|Q6YXK3|ATPA_PHYPA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|34494799|dbj|BAC85066.1| ATP synthase alpha subunit [Physcomitrella patens subsp. patens]
          Length = 507

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 189/424 (44%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  EDYS+ + VV  G +  +      +  L + V  G+ V  +    +++G  + 
Sbjct: 11  SIIRKQIEDYSQEIKVVNVGTVLQVGDGIARIYGLDK-VMAGELVEFE---DNSIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGVVLMGDGLTIQEGSSVKATGKIAQIPVSDGYLGRVVNALAQPIDGKGQIPASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESSAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +      + ++VV   ++    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVNTFEERGALEYTIVVAEAANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|38422323|emb|CAE45325.1| unnamed protein product [Magnetospirillum gryphiswaldense]
 gi|144898921|emb|CAM75785.1| ATP synthase F1, alpha subunit [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 509

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 110/453 (24%), Positives = 186/453 (41%), Gaps = 28/453 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++ + +    N      V + G + S+      V  L + V  G+ V   G  
Sbjct: 1   MEIRAAEISAILKQQIANFGTEAEVAEVGQVLSVGDGIARVHGLDK-VQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V I   G    I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --IKGMALNLETDNVGIVIFGDDRAIKEGDTVKRTGAIVEVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    +S  +  K P  + R+ V +   TGI+ +D   P+  GQR  V      GK
Sbjct: 117 GKGPIDASGMSR-VDVKAPGIIPRKSVHEPMSTGIKAVDALIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +L     +                I   VG++   V + ++          ++VV AT
Sbjct: 176 TAILVDTIINQKRWHDQSVEKDKLFCIYVAVGQKRSTVAQIVKTLTDYGAMDYTIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP T  T+ EYF   G + L+I D +++ A + R+++      P    YP
Sbjct: 236 ASEAAPLQFIAPYTGCTMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER        G  ++TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETE 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  ++   + ++ E   +     +   +D 
Sbjct: 356 LFYKGIRPAVNVGLSVSRVGSAAQIKAMKQVAGTIKMELAQYRE---MAAFAQFASDLDP 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQEI 433
              K + +   + + LKQ     +S+E+    I
Sbjct: 413 ATQKLLARGARLTELLKQPQFAPMSTEEEVVSI 445


>gi|217976535|ref|YP_002360682.1| ATP synthase F1, alpha subunit [Methylocella silvestris BL2]
 gi|254808106|sp|B8EQP9|ATPA_METSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|217501911|gb|ACK49320.1| ATP synthase F1, alpha subunit [Methylocella silvestris BL2]
          Length = 509

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++Q+ ++   N      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISQILKNEIANFGNEASVTEVGQVLSVGDGIARVYGL-DNVEAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  G  V   G    +       GRV++ALG PID
Sbjct: 59  --VRGMALNLEVDNVGVVIFGSDRDIKEGQTVKRTGAIVDVPVGRGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-PYETRSRVDVKAPGIIPRKSVHEPMATGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                  +L+  + +   D       +   VG++   V +F++    +   + S++V AT
Sbjct: 176 TAVALDAILNQKSANQGTDESAKLYCVYVAVGQKRSTVAQFVKVLEENGALEYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP +   + EYF     + L++ D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFSGCAMGEYFRDNAMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER        G  ++TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLRDANGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSAAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + + +   + + LKQ   
Sbjct: 413 TTQRLLARGSRLTELLKQPQF 433


>gi|113954358|ref|YP_731510.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CC9311]
 gi|123132412|sp|Q0I7R2|ATPA_SYNS3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|113881709|gb|ABI46667.1| ATP synthase F1, alpha subunit [Synechococcus sp. CC9311]
          Length = 506

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 114/424 (26%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V   G +  +      V  L Q V  G+ V  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVTNVGTVLQVGDGIARVYGL-QQVMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I  +G G  I  G  V   G+   +       GRV+N LG  IDG   L   +
Sbjct: 67  LEDDNVGIVLMGEGLGIQEGSTVRATGKIASVPVGDAMLGRVVNPLGVAIDGKGDLATTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 SRL-IESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAICIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     +   +G++   V +  E          +VVV A + E   L+ +AP T  +
Sbjct: 186 NQADQDVVCVYVAIGQKAASVAQVTEVLRERGALDYTVVVAANASEPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQQQLSRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|319956201|ref|YP_004167464.1| ATP synthase f1 subcomplex alpha subunit [Nitratifractor salsuginis
           DSM 16511]
 gi|319418605|gb|ADV45715.1| ATP synthase F1 subcomplex alpha subunit [Nitratifractor salsuginis
           DSM 16511]
          Length = 504

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E++  N+ + + G ++ I     TV  LS  V  G+ V  +       GQV+ 
Sbjct: 12  SIIKERIENFELNVDINEIGKVTGIGDGIATVYGLS-NVMAGEMVEFENGTK---GQVLN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   +I  G  V   G    I       GRV+N LG+PIDG   +   +
Sbjct: 68  LEEARVGVVVLGEYTDIREGMSVKRLGTLLEIPVGDGLVGRVVNPLGEPIDGKGPIEASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+TL      
Sbjct: 128 KRF-VEEKAPGIMARKSVHEPLQTGIKAIDALVPVGRGQRELIIGDRQTGKTTLAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          ++VV A + +   L+ +AP   VT
Sbjct: 187 NQKGQDVICIYVAIGQKQSTVASLVKKLEETGAMEYTIVVNAGASDPSALQFLAPYAGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEY+   G + ++  D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MAEYYRDNGRHAVIFYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA   +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDKLGAGSITAFPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E +       +   +D      + +   + + LK
Sbjct: 367 RVGGAAQIKAIKKVSGTLRLDLATYRELQ---AFAQFASDLDEHSRHQLERGARMTELLK 423

Query: 419 QSP 421
           Q P
Sbjct: 424 QPP 426


>gi|103487767|ref|YP_617328.1| F0F1 ATP synthase subunit alpha [Sphingopyxis alaskensis RB2256]
 gi|118573492|sp|Q1GQS7|ATPA_SPHAL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|98977844|gb|ABF53995.1| ATP synthase F1, alpha subunit [Sphingopyxis alaskensis RB2256]
          Length = 509

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 108/447 (24%), Positives = 181/447 (40%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++++ +D   N      V + G + S+      V  L   V  G+ V      
Sbjct: 1   MEIRAAEISKVIKDQIANFGTDATVTEIGSVLSVGDGIARVHGL-DNVQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V I   G    I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --VKGMALNLEADNVGIVIFGSDAAIKEGDQVKRTGTIVDVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D  M +  K P  + R  V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KADKRMRVEVKAPGIIPRTSVHEPVQTGLKALDALVPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T ++  A +   D       I   VG++   V + +     +     S+VV AT
Sbjct: 176 TAVAIDTFINQKAANAGDDESKKLYCIYVAVGQKRSTVAQIVRQLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T  T+ E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQFLAPYTGCTMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSE--KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER          G++TA+  +     + +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKMNSDNGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A +   KK+  S+   + ++ E         +   +D 
Sbjct: 356 LFNAGIRPAINVGLSVSRVGSAAQTKAMKKVSGSIKLELAQYREME---AFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K + +   +   LKQ        +
Sbjct: 413 STQKLLGRGARLTQLLKQPQFQPMPFE 439


>gi|222150027|ref|YP_002550984.1| F0F1 ATP synthase subunit alpha [Agrobacterium vitis S4]
 gi|254807669|sp|B9JTR4|ATPA_AGRVS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|221737009|gb|ACM37972.1| ATP synthase F1, alpha subunit [Agrobacterium vitis S4]
          Length = 508

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 105/440 (23%), Positives = 185/440 (42%), Gaps = 26/440 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKNQIKNFGQDAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    +   +  K P  + R+ V +   TGI+ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINSA-IRSRVDVKAPGIIPRKGVHEPMSTGIKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK---------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           + ++     +               +   +G++   V +F++        K S+++ AT+
Sbjct: 176 TAIILDTFLNQKPAHDAGGDDKMFCVYVAIGQKRSTVAQFVKVLEERGALKYSIIIAATA 235

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   ++ +AP    T+ EYF  KG + L+  D +++ A + R+++      P    YP 
Sbjct: 236 SDPAPMQYLAPFAGCTMGEYFRDKGQHALIAYDDLSKQAVAYRQMSLLLRRPPGREAYPG 295

Query: 285 SVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      E+G  ++TA+  +   G++ +  I  +V SI DG I L   L
Sbjct: 296 DVFYLHSRLLERAAKLSDERGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETDL 355

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D  
Sbjct: 356 FYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDAA 412

Query: 403 LDKAVHQVPIIYDFLKQSPS 422
             + +++   + + LKQ   
Sbjct: 413 TQRLLNRGARLTELLKQPQF 432


>gi|237736348|ref|ZP_04566829.1| F0F1 ATP synthase subunit alpha [Fusobacterium mortiferum ATCC
           9817]
 gi|229421390|gb|EEO36437.1| F0F1 ATP synthase subunit alpha [Fusobacterium mortiferum ATCC
           9817]
          Length = 500

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 111/423 (26%), Positives = 185/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    E+Y K+L +   G +  +      +  LS  +  G+ +         +G  + 
Sbjct: 10  SIIKNEIENYKKSLDIKTSGSVLEVGDGIARIYGLSSAMS-GELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   GR    P      GRV+NALG+PIDG   + K +
Sbjct: 66  LEEDNVGAVILGDFSLIKEGDEVKATGRVVSVPAGEAMLGRVVNALGEPIDGKGEI-KPE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             MEI  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMEIERKASGIISRKPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDAII 184

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          + +V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGTGVKCIYVAIGQKRSTVAQIYKKLEDAGAMEYTTIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 305 SDKLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ + +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGSAQIKAMKQVAAKVKLELAQYNE---LLTFAQFGSDLDKATKAQLERGHRIMEVLK 421

Query: 419 QSP 421
           QS 
Sbjct: 422 QSQ 424


>gi|48100966|ref|XP_392639.1| PREDICTED: ATP synthase subunit alpha, mitochondrial isoform 1
           [Apis mellifera]
          Length = 547

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G    I
Sbjct: 64  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDRHI 119

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   L    L   I +K P  + R  
Sbjct: 120 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPLN-SKLRFRIGTKAPGIIPRVS 178

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  +       
Sbjct: 179 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAGEEKKKLYC 238

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 239 IYVAIGQKRSTVAQIVKRLTDSGAMDYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 298

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 299 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNESLGGGSL 358

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 359 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 418

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 419 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 469


>gi|145523559|ref|XP_001447616.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415131|emb|CAK80219.1| unnamed protein product [Paramecium tetraurelia]
          Length = 536

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 112/435 (25%), Positives = 190/435 (43%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  ++ ++QL      N + + G + SI      V  L+Q V  G+ V     +S   G
Sbjct: 34  LEDKIKNISQL------NDIKEYGTVISIGDGIARVFGLTQ-VQAGEMVEF---SSGVRG 83

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V I  +G   EI  GD+V   G     P      GRV +ALG PIDG   +
Sbjct: 84  MALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGPV 143

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            K +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 144 -KTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAI 202

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228
            T+++     D  DK      I   +G++   V   ++        K ++VV AT+ E+ 
Sbjct: 203 DTIINQKPNFDSGDKNKQLYCIYVAIGQKRSTVANLVKILTQAGAMKYTIVVAATASEAA 262

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +   I EYF   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 263 PLQYLAPYSGCAIGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 322

Query: 289 ELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +E   G++TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 323 LHSRLLERAAKLNAENGNGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFKG 382

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K +   L   + ++ E   +     +   +D    + 
Sbjct: 383 IRPAINVGLSVSRVGSAAQIKAMKTVAGRLKLELAQYRE---VAAFAQFGSDLDAATQQL 439

Query: 407 VHQVPIIYDFLKQSP 421
           +++   + + LKQ  
Sbjct: 440 LNRGAQLTELLKQKQ 454


>gi|146184059|ref|XP_001027692.2| ATP synthase F1, alpha subunit family protein [Tetrahymena
           thermophila]
 gi|146143383|gb|EAS07450.2| ATP synthase F1, alpha subunit family protein [Tetrahymena
           thermophila SB210]
          Length = 546

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 182/430 (42%), Gaps = 23/430 (5%)

Query: 7   TLAQLAE-DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            LA+  +    +N + + G + SI      V  L++ V  G+ V  +   S   G  + +
Sbjct: 42  VLAEKIKGITQQNDITEYGTVISIGDGIARVFGLTK-VQAGEMVEFK---SGIRGMALNL 97

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
             D V +  +G   +I  GD+V   G     P     CGRV +ALG PIDG   L K   
Sbjct: 98  ETDNVGVVVLGNDRDIKEGDVVKRTGAIVDVPIGEAMCGRVFDALGNPIDGLGPL-KTTQ 156

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK+ +      +
Sbjct: 157 RARVEIKAPGIIPRQSVRQPMQTGIKCVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 216

Query: 185 DCFD----------KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKM 233
                           I   VG++   +   +      +  K ++VV AT+ ++  L+ +
Sbjct: 217 QKEAFNTGDVKKQLYCIYVAVGQKRSTIANLVSILKQHDCMKFTIVVCATASDAAPLQFL 276

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   I E+F   G + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 277 APYSGCAIGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 336

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER          G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 337 LERAAKMNDSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAI 396

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   +  + E   +     +   +D    + ++   
Sbjct: 397 NVGLSVSRVGSAAQIKAMKKIAGNLKLTLATYRE---LAAFSQFGSDLDAKTQQQLNTGE 453

Query: 412 IIYDFLKQSP 421
            + + LKQ+ 
Sbjct: 454 RLVEMLKQNQ 463


>gi|77918555|ref|YP_356370.1| F0F1 ATP synthase subunit alpha [Pelobacter carbinolicus DSM 2380]
 gi|77920723|ref|YP_358538.1| F0F1 ATP synthase subunit alpha [Pelobacter carbinolicus DSM 2380]
 gi|115312225|sp|Q39ZT9|ATPA1_PELCD RecName: Full=ATP synthase subunit alpha 1/3; AltName: Full=ATP
           synthase F1 sector subunit alpha 1/3; AltName:
           Full=F-ATPase subunit alpha 1/3
 gi|77544638|gb|ABA88200.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter carbinolicus
           DSM 2380]
 gi|77546806|gb|ABA90368.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter carbinolicus
           DSM 2380]
          Length = 502

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 103/430 (23%), Positives = 186/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E++ + + + + G I S+      +  L++    G+ +   G   D +G V+ 
Sbjct: 10  AIIEQQIENFDREIEISEMGTIISVGDGIARIHGLNR-AMAGELLEFPG---DVIGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   GR   +       GRV+N +G+PIDG  +L +G 
Sbjct: 66  LEEDNVGAAILGDTHHIKEGDSVRRTGRIVEVPVGEALIGRVVNGIGQPIDGGGAL-EGA 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ L      
Sbjct: 125 EARQVEIKAPGIVTRKSVHQPVQTGLKAIDALVPIGRGQRELIIGDRQTGKTALAIDAII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++          ++VV A + E   L+ +AP   VT
Sbjct: 185 NQKGQDMVCIYVAIGQKQSTVAQVVDKLKQHGAMDYTIVVSAGASEPAPLQFIAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + L++ D +++ A + R+++      P    +P  VF    RLLER    
Sbjct: 245 MGEYFRDNGRHALIVYDDLSKHAVAYRQLSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDELGGGSLTALPIIETQAGDLSSYIPTNVISITDGQIFLEADLFYSGVRPAINVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGSAQVKAMKQVAGTLRLSLAQYRE---MAAFAQFGSDLDAATQKQLARGARLVEILK 421

Query: 419 QSPSDLSSED 428
           Q        +
Sbjct: 422 QPQYQPLPVE 431


>gi|83589626|ref|YP_429635.1| ATPase FliI/YscN [Moorella thermoacetica ATCC 39073]
 gi|83572540|gb|ABC19092.1| type III secretion system ATPase, FliI/YscN [Moorella thermoacetica
           ATCC 39073]
          Length = 436

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 161/441 (36%), Positives = 248/441 (56%), Gaps = 10/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           M    +  +         L  +GG ++ +T +      L     +G+   ++   +   +
Sbjct: 1   MSLAPDLTSYRQRLAGATLWRRGGKVTRVTGLTIEARGL--KAAIGELCRIYNNGSGPIV 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P+G  E I  G  V   GR   I       GRV++ LG+ +DG   
Sbjct: 59  AEVVGFREEVTLLMPLGELEGIGPGCRVIATGRGHYIRVGEELLGRVLDGLGRSLDGT-V 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  GD    + ++ P  ++R+R+++   TG++ ID       GQR+G+FAGSG+GKSTLL
Sbjct: 118 LVSGD-PQPVNNRPPNPLSRRRIKEVLATGVKAIDALLTCGCGQRVGIFAGSGVGKSTLL 176

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREVR+FIE D   + L +S+VV ATSD+  ++R     T
Sbjct: 177 GMIARHSTADINVIALIGERGREVRDFIEGDLGPEGLARSIVVAATSDQPALVRIKGAFT 236

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G NVLL++DS+TRFA + RE+    GE P  RGY  SVF+ LP+L+ER 
Sbjct: 237 ATAIAEYFRDQGKNVLLMMDSLTRFAIAQREVGLAIGEPPTTRGYTPSVFASLPKLVERA 296

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E  +G+IT + +VLV+GD+ N+P+AD+VR +LDGHIVL+R LA    YP +D L S+
Sbjct: 297 GNGE--RGSITGLYTVLVEGDDMNEPVADTVRGLLDGHIVLSRRLAAANHYPAIDVLQSI 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL  +  S ++++    L  L+  ++E  D+  IG Y+ G +  +D A+     I  FL
Sbjct: 355 SRLMPEITSREQQEQAGKLRDLLAAYQEAADLIEIGAYQAGSNPRVDAALKYHEAIQSFL 414

Query: 418 KQSPSD-LSSEDVFQEITKKL 437
           +Q   +  + +D    +   L
Sbjct: 415 RQGKDEYFAFQDTLAALAGIL 435


>gi|260466812|ref|ZP_05812997.1| ATP synthase F1, alpha subunit [Mesorhizobium opportunistum
           WSM2075]
 gi|259029424|gb|EEW30715.1| ATP synthase F1, alpha subunit [Mesorhizobium opportunistum
           WSM2075]
          Length = 509

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGADRDIKEGDTVKRTGAIVDVPVGPGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIKAVE-RKRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S++V AT
Sbjct: 176 TAIILDTMLNQKSVHDNGPEKEKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP    T+ EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCTMGEYFRDNGMHALISYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +    ++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDDLGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGSRLTELLKQPQF 433


>gi|153008437|ref|YP_001369652.1| F0F1 ATP synthase subunit alpha [Ochrobactrum anthropi ATCC 49188]
 gi|166201671|sp|A6WXW9|ATPA_OCHA4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151560325|gb|ABS13823.1| ATP synthase F1, alpha subunit [Ochrobactrum anthropi ATCC 49188]
          Length = 509

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDIVKRTGAIVDVPVGPGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ +D   P+  GQR  V      GK
Sbjct: 117 GKGPIVATE-RRRVDVKAPGIIPRKSVHEPMSTGLKAVDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   +G++   V +F++        + S+V+ AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDSEKLYCVYVAIGQKRSTVAQFVKVLEERGALEYSIVIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF     + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNSMHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQVKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 STQRLLNRGARLTELLKQPQF 433


>gi|83944758|ref|ZP_00957124.1| ATP synthase subunit A [Oceanicaulis alexandrii HTCC2633]
 gi|83851540|gb|EAP89395.1| ATP synthase subunit A [Oceanicaulis alexandrii HTCC2633]
          Length = 509

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 108/447 (24%), Positives = 182/447 (40%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V   G + S+      V  L + V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGAEADVSDVGQVLSVGDGIARVYGLDE-VQAGELVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V     G    I  GD V   G            GRV+NALG+PID
Sbjct: 59  --VKGMALNLERDNVGCVIFGDDRGIKEGDTVKRLGSIVDAPVGKGLLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + +  K P  + R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIDAAERRV-VDVKAPGILPRKSVHEPMATGIKAIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+L+    +   D       +  +VG++   V + ++    +     S+VV AT
Sbjct: 176 TAIAIDTILNQKQLNQGDDESQKLYCVYVVVGQKRSTVAQVVKTLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T   + EYF   G + L+I D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFTGCAMGEYFRDNGMHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     +  G+   TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNETHGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   K     +   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSAAQTKATKTAAGKIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K + +   + + LKQ      S +
Sbjct: 413 ATQKLLSRGERLTELLKQPQFSPLSME 439


>gi|148553545|ref|YP_001261127.1| F0F1 ATP synthase subunit alpha [Sphingomonas wittichii RW1]
 gi|166201681|sp|A5V3X3|ATPA_SPHWW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148498735|gb|ABQ66989.1| ATP synthase F1, alpha subunit [Sphingomonas wittichii RW1]
          Length = 509

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 99/433 (22%), Positives = 179/433 (41%), Gaps = 22/433 (5%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           Q+A   S+  + + G + S+      +  L   V  G+ +          G  + +  D 
Sbjct: 15  QIASFGSEAQISEVGQVLSVGDGIARIHGL-DNVQAGEMIEFSNG---IKGMALNLEADN 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V     G   +I  GD+V   G    +       GRV++ LG PIDG   +   +    +
Sbjct: 71  VGAVIFGSDSQIKEGDVVKRTGTIVDVPVGKGLLGRVVDGLGNPIDGKGPIV-AEQRSRV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFAR 183
             K P  + R+ V +  +TG++ +D   P+  GQR  +      GK      T ++    
Sbjct: 130 EVKAPGIIPRKSVHEPVQTGLKALDALVPVGRGQRELIIGDRQTGKSAVAIDTFINQKTA 189

Query: 184 SDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
           +   D       +   +G++   V + ++    +     S+VV AT+ +   L+ +AP T
Sbjct: 190 NAGTDESKKLYCVYVAIGQKRSTVAQLVKTLEENGAMEYSIVVAATASDPAPLQYLAPYT 249

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            V + EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 250 GVAMGEYFRDNGMHGLIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 309

Query: 298 GPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                  GN   TA+  +     + +  I  +V SI DG I L   L  +G  P ++   
Sbjct: 310 AKLNDANGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYQGVRPAINVGL 369

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A +   KK+  S+   + ++ E   +     +   +D    + +++   + +
Sbjct: 370 SVSRVGSAAQTKAMKKVAGSIKLELAQYRE---MAAFAQFGSDLDASTQRLLNRGARLTE 426

Query: 416 FLKQSPSDLSSED 428
            LKQ        +
Sbjct: 427 LLKQPQFQPLPFE 439


>gi|255658914|ref|ZP_05404323.1| ATP synthase F1, alpha subunit [Mitsuokella multacida DSM 20544]
 gi|260848864|gb|EEX68871.1| ATP synthase F1, alpha subunit [Mitsuokella multacida DSM 20544]
          Length = 505

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 185/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + +D  KN      V   G +  I      +  L +    G+ +      
Sbjct: 1   MKMNPEEITAIIKDQIKNYDVDLNVDDVGSVIEIGDGIAHIHGLDK-AMAGELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           +D  G V+ +  D V    +G   +I  G  V   GR   +       GRV++ALG+PID
Sbjct: 57  NDIYGLVLNLEQDNVGAVILGGETKIKEGSQVKRTGRIMQVPVGEAMIGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  +    P   +R+ V++  +TGI+ ID   P+  GQR  +    GIGK
Sbjct: 117 GKGKIETTE-TRPVEYPAPGIADRKPVKEPLQTGIKAIDALVPIGRGQRELIIGDRGIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     +   +G++   V   ++          ++VV AT+ +S  L+
Sbjct: 176 TAIAIDTILNQHDQNCICVYVAIGQKASTVARVVKTLEERGAMDYTIVVAATAADSSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AE+F  +G   L + D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEHFMYQGKACLCVYDDLTKHAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I+L       G  P
Sbjct: 296 RLLERAAKLNDELGGGSITALPIIETQAGDLSAYIPTNVISITDGQIMLETDSFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQIKAMKQVAGTLRLDLAQYRE---LAAFSQFASDLDKETKAQLDR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GIRMVETLKQPQ 424


>gi|319780915|ref|YP_004140391.1| ATP synthase F1 subunit alpha [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166803|gb|ADV10341.1| ATP synthase F1, alpha subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 509

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 102/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGADRDIKEGDIVKRTGAIVDVPVGPGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIKAVE-RKRVDVKAPGIIPRKSVNEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+++ AT
Sbjct: 176 TAIILDTMLNQKSVHDNGPEKEKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIIIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP    T+ EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQFLAPFAGCTMGEYFRDNGMHALISYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +    ++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDDLGGGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGSRLTELLKQPQF 433


>gi|110801696|ref|YP_699464.1| F0F1 ATP synthase subunit alpha [Clostridium perfringens SM101]
 gi|122956534|sp|Q0SQZ3|ATPA_CLOPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110682197|gb|ABG85567.1| ATP synthase F1, alpha subunit [Clostridium perfringens SM101]
          Length = 502

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 112/432 (25%), Positives = 182/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + ++  KN       V  G I  I      V  L +    G+ +    + 
Sbjct: 1   MHIKPEEITSIIKNEIKNYEKELETVDSGTIIQIGDGVARVYGLEE-CMEGELLEFPNQ- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E I  GD+V   G+   +       GRV+N+LG+PID
Sbjct: 59  --VFGMALNLEQDNVGCVLLGSEEGIKEGDIVKRTGKIVEVPVGEDLIGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    I    P  + R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   +     +     S+VV A++ ES  L+
Sbjct: 176 TAIAIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF +KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE---LASFAQFGSDLDKDTQARLEK 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GKRLIEILKQDQ 424


>gi|319406293|emb|CBI79930.1| ATP synthase alpha chain [Bartonella sp. AR 15-3]
          Length = 511

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 107/438 (24%), Positives = 182/438 (41%), Gaps = 30/438 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K ++   Q AE      V + G++ S+      V  L   V  G+ V          G
Sbjct: 12  LKKQIKNFDQKAE------VSEVGWVLSVGDGIARVYGL-DNVQAGEMVAFPNG---VQG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + + +D V I   G   +I  GD V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLEMDNVGIVIFGSDRDIREGDTVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K      +  K P  + RQ V +   TG++VID   P+  GQR  V      GK+ +L 
Sbjct: 122 -KTKERRRVDVKAPGIIPRQSVHEPMSTGLKVIDALIPIGRGQRELVIGDRQTGKTAILL 180

Query: 180 MFARSDCFDK------------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
               +                  I   +G++   V +F++          S++V AT+ +
Sbjct: 181 DTFLNQKRFHENSTGQDQDKIYCIYVAIGQKRSTVAQFVKILEERGALDYSIIVAATASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP  V
Sbjct: 241 PAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGPSE--KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER          G++TA+  +    ++ +  I  +V SI DG I L  +L  
Sbjct: 301 FYLHSRLLERAAKLNADNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D    
Sbjct: 361 QGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDASTQ 417

Query: 405 KAVHQVPIIYDFLKQSPS 422
             +++   + + LKQ   
Sbjct: 418 HLLNRGARLTELLKQLQF 435


>gi|75755644|ref|YP_319750.1| ATP synthase CF1 alpha subunit [Acorus calamus]
 gi|161622295|ref|YP_001586167.1| ATP synthase CF1 alpha subunit [Acorus americanus]
 gi|146313783|sp|Q3V549|ATPA_ACOCL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|190358225|sp|A9LYH0|ATPA_ACOAM RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|74381694|emb|CAI53779.1| ATPase alpha subunit [Acorus calamus]
 gi|160369838|gb|ABX38729.1| ATP synthase CF1 alpha subunit [Acorus americanus]
          Length = 507

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 188/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYTREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLTIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEIAASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPVGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGKRLRELLKQS 424

Query: 421 PSDLSSED 428
            S+  + D
Sbjct: 425 QSEPLAVD 432


>gi|46562141|ref|YP_009159.1| type III secretion system ATPase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120586842|ref|YP_961187.1| type III secretion system ATPase [Desulfovibrio vulgaris subsp.
           vulgaris DP4]
 gi|46447678|gb|AAS94344.1| type III secretion system ATPase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120564256|gb|ABM29999.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio vulgaris
           DP4]
 gi|311235508|gb|ADP88361.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Desulfovibrio vulgaris RCH1]
          Length = 438

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 229/422 (54%), Gaps = 12/422 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYICPVGI 77
           V   G +  +      +  +   V +G+  + +    + +   +V+     +  + P+G 
Sbjct: 20  VEVRGRVEQVVGTI--IRAVVPGVKVGELCLLRNPWDDWNLRAEVVGFVKHVALLTPLGN 77

Query: 78  GEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + IS    V   G    I       GRV++ LG PIDG   L K      + +  P  M
Sbjct: 78  LQGISPATEVIPTGEILSIPVGEDLLGRVLDGLGDPIDGGPPL-KPRTRYPVYADPPNPM 136

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ +++    G+RV+D       GQR+G+FA +G GKSTLLS   +    D  +++L+G
Sbjct: 137 TRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIG 196

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFI  D   +  KK+V+VV+TSD S + R  A  TA  IAEYF  +  +VLL+
Sbjct: 197 ERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSVLLM 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRF  + REI   +GE P  RG+P SVFS LPRL+ER G S+  +G+ITA+ +VLV
Sbjct: 257 MDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSD--RGSITALYTVLV 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+  +PIAD  RSILDGHIVL+R LA    YP +D  ASVSR+ +     + K     
Sbjct: 315 EGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVGKEHKGAAQK 374

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  ++ ++ E   +  IG Y+ G D   D A+ +V  +  FL+Q   + S    F E   
Sbjct: 375 LRKILAKYAEVELLVQIGEYKKGSDKEADDALARVGAVNAFLRQGLDERS---TFDETLA 431

Query: 436 KL 437
            L
Sbjct: 432 AL 433


>gi|253574260|ref|ZP_04851602.1| ATP synthase F1, alpha subunit [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846737|gb|EES74743.1| ATP synthase F1, alpha subunit [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 507

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 181/422 (42%), Gaps = 14/422 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+ +  S+  V + G +  +      V  L +     + +  +       G  + +   
Sbjct: 17  SQIEQYKSEIEVAEVGTVIQVGDGIARVHGL-ENAMANELLEFENG---VFGLALNLEES 72

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G   EI  GD V   G+   +       GRV+N LG+PIDG   +   +    
Sbjct: 73  NVGVVILGPYSEIREGDQVKRTGQIMQVPVGEALLGRVVNPLGQPIDGKGPIETTEFR-P 131

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + +  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      +   
Sbjct: 132 VENNAPGVIDRKSVHEPMQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAIAIDTIINQKG 191

Query: 188 D--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +  K I   +G++   V   +E          ++VV A++ E   L  +AP   V +AEY
Sbjct: 192 NGVKCIYVAIGQKQSTVVSVVETLRRHGALDYTIVVSASASEPAPLLYIAPYAGVAMAEY 251

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 252 FMYKGEHVLIIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDEL 311

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SVSR+  
Sbjct: 312 GGGSITALPFIETQASDVSAYIPTNVISITDGQIFLESDLFYSGQRPAVNVGISVSRVGG 371

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   + ++ E +       +   +D      + +   + + LKQ  +
Sbjct: 372 SAQIKAMKKVAGTLRLDLAQYRELQ---AFSQFGSDLDKSTQARLTRGSRMMEILKQGVN 428

Query: 423 DL 424
             
Sbjct: 429 QP 430


>gi|332971781|gb|EGK10729.1| ATP synthase F1 sector alpha subunit [Desmospora sp. 8437]
          Length = 505

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 109/435 (25%), Positives = 184/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +       VV  G +  +      V  L + V  G+ V  +   
Sbjct: 1   MSIKPEEISSLIKKQIEQFEGDIEVVDVGSVIQVGDGIARVHGL-KNVMAGELVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +  D V +  +G   EI  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VMGMAQNLEEDHVGVVILGPYTEIREGDQVKRTGRIMEVPVGEALLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   +    + S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGAVETSEYR-PVESPAPGVMDRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +  D     I   +G++   V   +E          ++VV A++ E   L 
Sbjct: 176 TTVAVDTIINQKDQDMICIYVAIGQKQSTVVGVVEKLRKAGAMDYTIVVSASASEPSPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G +VL++ D +T+ A + RE++      P    +P  VF    
Sbjct: 236 FLAPYAGCAMGEYFMYQGKHVLVVYDDLTKQAAAYRELSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDAKGGGSLTALPFIETQAGDISAYIPTNVISITDGQIFLETDLFHAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+  +L   + ++   RD++    +   +D      + +
Sbjct: 356 AVNVGTSVSRVGGDAQIKAMKKVSGTLKLDLAQY---RDLQAFAQFGSDLDKATQAKLSR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ  ++ 
Sbjct: 413 GERLVEILKQGENEP 427


>gi|69214346|gb|AAZ03781.1| ATP synthase alpha chain [Acorus americanus]
          Length = 506

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 188/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYTREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLTIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEIAASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPVGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGKRLRELLKQS 424

Query: 421 PSDLSSED 428
            S+  + D
Sbjct: 425 QSEPLAVD 432


>gi|182623933|ref|ZP_02951721.1| ATP synthase F1, alpha subunit [Clostridium perfringens D str.
           JGS1721]
 gi|177910826|gb|EDT73180.1| ATP synthase F1, alpha subunit [Clostridium perfringens D str.
           JGS1721]
          Length = 502

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 112/432 (25%), Positives = 183/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + ++  KN       V  G I  I      V  L + +  G+ +    + 
Sbjct: 1   MHIKPEEITSIIKNEIKNYEKELETVDSGTIIQIGDGVARVYGLEECIE-GELLEFPNQ- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E I  GD+V   G+   +       GRV+N+LG+PID
Sbjct: 59  --VFGMALNLEQDNVGCVLLGSEEGIKEGDIVKRTGKIVEVPVGEDLIGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    I    P  + R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   +     +     S+VV A++ ES  L+
Sbjct: 176 TAIAIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF +KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE---LASFAQFGSDLDKDTQARLEK 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GKRLIEILKQDQ 424


>gi|319899413|ref|YP_004159510.1| ATP synthase alpha chain [Bartonella clarridgeiae 73]
 gi|319403381|emb|CBI76945.1| ATP synthase alpha chain [Bartonella clarridgeiae 73]
          Length = 510

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 184/437 (42%), Gaps = 29/437 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K +++  Q AE      V + G++ S+      V  L   V  G+ V          G
Sbjct: 12  LKKQIKSFDQKAE------VSEVGWVLSVGDGIARVYGL-DNVQAGEMVAFSNG---VQG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + + +D V +   G   +I  GD V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLEIDNVGVVIFGSDRDIREGDTVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            K      +  K P  + RQ V +   TG++VID   P+  GQR  V      GK+ +L 
Sbjct: 122 -KTKERRRVDVKAPGIIPRQSVHEPMSTGLKVIDALIPIGRGQRELVIGDRQTGKTAILL 180

Query: 179 ----------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                         R       I   +G++   V +F++          S++V AT+ +S
Sbjct: 181 DTFLNQKSFHEERGREKDKVYCIYVAIGQKRSAVAQFVKVLEEHGALDYSIIVAATASDS 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP  VF
Sbjct: 241 APMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 288 SELPRLLERIGPSE--KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER          G++TA+  +    ++ +  I  +V SI DG I L  +L  +
Sbjct: 301 YLHSRLLERAAKLNADNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFYQ 360

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D     
Sbjct: 361 GIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDASTQH 417

Query: 406 AVHQVPIIYDFLKQSPS 422
            +++   + + LKQ   
Sbjct: 418 LLNRGERLTELLKQLQF 434


>gi|18311171|ref|NP_563105.1| F0F1 ATP synthase subunit alpha [Clostridium perfringens str. 13]
 gi|110799900|ref|YP_696868.1| F0F1 ATP synthase subunit alpha [Clostridium perfringens ATCC
           13124]
 gi|168205574|ref|ZP_02631579.1| ATP synthase F1, alpha subunit [Clostridium perfringens E str.
           JGS1987]
 gi|168210119|ref|ZP_02635744.1| ATP synthase F1, alpha subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|168213707|ref|ZP_02639332.1| ATP synthase F1, alpha subunit [Clostridium perfringens CPE str.
           F4969]
 gi|168215818|ref|ZP_02641443.1| ATP synthase F1, alpha subunit [Clostridium perfringens NCTC 8239]
 gi|169344183|ref|ZP_02865165.1| ATP synthase F1, alpha subunit [Clostridium perfringens C str.
           JGS1495]
 gi|20137354|sp|Q8XID2|ATPA_CLOPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123049637|sp|Q0TNC2|ATPA_CLOP1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|18145854|dbj|BAB81895.1| ATP synthase alpha subunit [Clostridium perfringens str. 13]
 gi|110674547|gb|ABG83534.1| ATP synthase F1, alpha subunit [Clostridium perfringens ATCC 13124]
 gi|169297641|gb|EDS79741.1| ATP synthase F1, alpha subunit [Clostridium perfringens C str.
           JGS1495]
 gi|170662849|gb|EDT15532.1| ATP synthase F1, alpha subunit [Clostridium perfringens E str.
           JGS1987]
 gi|170711744|gb|EDT23926.1| ATP synthase F1, alpha subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|170714802|gb|EDT26984.1| ATP synthase F1, alpha subunit [Clostridium perfringens CPE str.
           F4969]
 gi|182382309|gb|EDT79788.1| ATP synthase F1, alpha subunit [Clostridium perfringens NCTC 8239]
          Length = 502

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 112/432 (25%), Positives = 182/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + ++  KN       V  G I  I      V  L +    G+ +    + 
Sbjct: 1   MHIKPEEITSIIKNEIKNYEKELETVDSGTIIQIGDGVARVYGLEE-CMEGELLEFPNQ- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E I  GD+V   G+   +       GRV+N+LG+PID
Sbjct: 59  --VFGMALNLEQDNVGCVLLGSEEGIKEGDIVKRTGKIVEVPVGEDLIGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    I    P  + R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   +     +     S+VV A++ ES  L+
Sbjct: 176 TAIAIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF +KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKQVSGTLRLELAQYRE---LASFAQFGSDLDKDTQARLEK 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GKRLIEILKQDQ 424


>gi|150406456|ref|YP_001315101.1| ATP synthase F1 subunit alpha [Chlorokybus atmophyticus]
 gi|126507693|gb|ABO15090.1| ATP synthase F1 subunit alpha [Chlorokybus atmophyticus]
          Length = 510

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 179/429 (41%), Gaps = 23/429 (5%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L +   +Y K L V G G + S+      V  L++ +  G+ V     +S   G  + + 
Sbjct: 13  LEEEITNYYKRLKVDGIGRVISVGDGIARVYGLNK-IQAGEMVEF---SSGVKGMALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +   G    I  GD+V   G    +       GRV++ALG PIDG   L     S
Sbjct: 69  NDNVGVVLFGSDTGIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGNPIDGKGRLTDVSRS 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 129 R-VEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQ 187

Query: 186 CFD----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                          +   VG++   V + ++        + S++V AT+ +   L+ +A
Sbjct: 188 KEVNSGTDSTKKLYCVYVAVGQKRSTVAQLVKTLSEKGALEYSIIVAATASDPAPLQFLA 247

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + EYF     + L+I D +++ + + R+++      P    +P  VF    RLL
Sbjct: 248 PYAGCAMGEYFRDNKMHSLIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLL 307

Query: 295 ERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +KG  ++TA+  +     + +  I  +V SI DG I L   L   G  P ++
Sbjct: 308 ERAAKLSDQKGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAIN 367

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  SL   + ++ E   +     +   +D      +++   
Sbjct: 368 VGLSVSRVGSAAQLKAMKQVSGSLKLELAQYRE---VAAFAQFGSDLDAATQYLLNRGAR 424

Query: 413 IYDFLKQSP 421
           + + LKQ  
Sbjct: 425 LTEVLKQDQ 433


>gi|119775429|ref|YP_928169.1| flagellum-specific ATP synthase [Shewanella amazonensis SB2B]
 gi|119767929|gb|ABM00500.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B]
          Length = 446

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 159/435 (36%), Positives = 239/435 (54%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  L QL +    N  V  G +  +  +    +       +G          + + +V+ 
Sbjct: 9   LNNLRQLRQSLPVNRPVAEGQLVRVVGLTLEASG--CRAPVGSLCAIDTMGGELIAEVVG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + D++Y+ P+   + +  G  V   G    I       GRV++  G+P+DG   LG  D
Sbjct: 67  FDEDLLYLMPIEELKGVLPGARVRPLGEQTGIHVGMSLLGRVLDGGGEPLDGLGPLGTTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++          + R+ + +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 127 IAPR-HGPAINPLARRPIHEPLDVGIRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADVIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER G    
Sbjct: 246 EYFRDLGFNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGP 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRTLADSGHYPAIDIEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S    + +  +      +++ RD+  IG Y  G D  +D A+   P +  FL+Q   
Sbjct: 366 MVISPAHLEAMRRVKQTYSLYQQNRDLISIGAYAAGSDPRIDNAIRLQPAMNAFLRQGMR 425

Query: 423 DLSSEDVFQEITKKL 437
           D  S    + +  ++
Sbjct: 426 DAISLSDSETMLGQI 440


>gi|584805|sp|Q07405|ATPA_MYXXA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119367957|sp|Q1CWT2|ATPA_MYXXD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|286117|dbj|BAA03725.1| proton translocating ATPase [Myxococcus xanthus]
 gi|741014|prf||2006275A 59kD membrane-associated GTP-binding protein
          Length = 515

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 93/424 (21%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  +DY K   V + G + S+      +  L +    G+ V          G V+ + 
Sbjct: 12  IREQIKDYGKKVTVAETGTVLSVGDGIARIYGL-EGALAGELVEFANG---VQGLVLNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G  + I  GD V    +   +       GRV++ LGKP+DG   +   +  
Sbjct: 68  EDNVGVAIMGDFQAIREGDTVKRTQQIASVPVGKELLGRVVDPLGKPLDGKGPIAATETR 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  K P  ++R+ V +  +TGI+ +D   P+  GQR  +      GK+ +      + 
Sbjct: 128 R-LEVKAPGIVSRKSVHEPLQTGIKALDALVPVGRGQRELIIGDRQTGKTAVAIDTIINQ 186

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V + +E          + VV + + +   ++  AP   V + 
Sbjct: 187 KGLNVYCIYVAIGQKQSTVAQVVEKLNRYGAMEYTTVVASNASDPAPMQFFAPYAGVAMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF     + L++ D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 247 EYFRDNKMHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYVHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E+G  ++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 EEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFAGVRPAINVGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  ++   + ++ E   +     +   +D    + + +   + + LKQ 
Sbjct: 367 GSAAQIKAMKQVAGTMKLELAQYRE---LAAFAQFGSDLDKATQETLARGARMVELLKQG 423

Query: 421 PSDL 424
             + 
Sbjct: 424 QYEP 427


>gi|253807606|gb|ACT36184.1| ATP synthase F1 subunit alpha [Helicosporidium sp. ex Simulium
           jonesi]
          Length = 506

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 101/449 (22%), Positives = 185/449 (41%), Gaps = 28/449 (6%)

Query: 1   MQKNLETLAQLAED-----YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           ++ +L  ++ L E      YS   V + G + SI      V  L++ +  G+ V   G  
Sbjct: 3   LRLSLSEISDLLEQNISNTYSDANVEEVGRVLSIGDGIARVYGLNK-IQAGEMVEFPGG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD+V   G    +       GRV++ LG PID
Sbjct: 61  --IKGMALNLENDNVGVVLFGSDTAIKEGDMVKRTGTIVDVPVGKGILGRVLDGLGNPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L           K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GKGPLTNV-TRKRAEVKAPGIIVRESVSQPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V +F+     +   + SV+V A
Sbjct: 178 TAIALDAIINQKSVNSTASDESAKLYCVYVAIGQKRSTVAQFVRILENNGALEYSVIVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ + + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     K+   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKMSKDVGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A     K++  ++   + ++ E   +     +   +D
Sbjct: 358 ELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
                 +++   + + LKQ      S + 
Sbjct: 415 ASTQYLLNRGARLTEVLKQDQYSPMSIET 443


>gi|116073688|ref|ZP_01470950.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. RS9916]
 gi|116068993|gb|EAU74745.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. RS9916]
          Length = 506

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 114/424 (26%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V   G +  +      V  L Q    G+ +  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGTVLQVGDGIARVYGL-QQAMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N LG+PIDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGNGIQEGSTVRATGKIAAVPVGDAMLGRVVNPLGQPIDGKGEIATTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     +   VG++   V +  E          SVVV A + ES  L+ +AP T  +
Sbjct: 186 NQADQDVVCVYVAVGQKAASVAQVTEVLRERGALAYSVVVAANASESAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQQQLGRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|11467778|ref|NP_050829.1| ATP synthase CF1 alpha subunit [Nephroselmis olivacea]
 gi|17432922|sp|Q9TL16|ATPA_NEPOL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|5880707|gb|AAD54800.1|AF137379_23 CF1 alpha subunit of ATP synthase [Nephroselmis olivacea]
          Length = 501

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 186/426 (43%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E YS+ + VV  G +  +      +  L + V  G+ +  +      +G  + + 
Sbjct: 13  IRQQIEQYSQEVKVVSVGTVLQVGDGIARIYGLEK-VMAGELLEFEDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G  I  G  V   G+  ++     + GRV+NAL +PIDG   +   +  
Sbjct: 69  ADNVGAVLMGSGLSIQEGSAVKATGKIAQVPVGEAFLGRVVNALARPIDGKGDIASKESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + +    P  + R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-LEGPAPGIIERRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAIATDAIVNQ 187

Query: 186 --CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +      D ++ +++V  T+D    L+ +AP T   +A
Sbjct: 188 KGSGVICVYVAIGQKASSVAQIVTTLQEKDAMRYTIIVSETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYSGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  +   G + +  I  +V SI DG I L+  +   G  P ++   SVSR+
Sbjct: 308 ALGEGSMTALPVIETQGGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++ S L   + +F E         +   +D      + +   + + LKQ+
Sbjct: 368 GSAAQVKAMKQVASKLKLELAQFSELE---AFAQFSSDLDAATQAQLARGVRLRELLKQA 424

Query: 421 PSDLSS 426
            S+  S
Sbjct: 425 QSEPLS 430


>gi|78044529|ref|YP_361340.1| F0F1 ATP synthase subunit alpha [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|115312240|sp|Q3A944|ATPA_CARHZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|77996644|gb|ABB15543.1| ATP synthase F1, alpha subunit [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 501

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 174/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +      V  L +     + +   G     LG  + 
Sbjct: 10  SIIKQQIENYQVQVEVSSVGTVIQVGDGIARVYGL-EDCMASELLEFPGG---VLGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   GR   +       GRV+N LG+P+DG   +   D
Sbjct: 66  LEEDNVGCVILGPYTHIKEGDTVKRTGRVVSVPVGEALIGRVVNPLGQPLDGKGPIV-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 125 KFRPVERIAPGVITRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + +     I   +G++   V + ++          ++VV AT+ +   L  +AP     
Sbjct: 185 NQKNTDVICIYVAIGQKASTVAKVVQTLKDHGAMDYTIVVSATASDPAPLLYLAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMEQGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 SDEYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFYAGVRPAVNVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  SL   + ++ E   +     +   +D      + +   + + LK
Sbjct: 365 RVGGAAQIKAMKQVAGSLRLDLAQYRE---LAAFAQFGSDLDKATLARLTRGERLVELLK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QDQ 424


>gi|118590576|ref|ZP_01547978.1| F0F1 ATP synthase subunit alpha [Stappia aggregata IAM 12614]
 gi|118437039|gb|EAV43678.1| F0F1 ATP synthase subunit alpha [Stappia aggregata IAM 12614]
          Length = 509

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 179/441 (40%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  K+      V + G + S+      V  L + V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKSFGQEAEVSEVGQVLSVGDGIARVYGLDK-VQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --IKGMALNLETDNVGVVIFGSDRDIKEGDTVKRTGAIVEVPVGKGLLGRVVDPLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIEATEKRR-VDVKAPGILPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +          D     I   +G++   V +F++          S+VV AT
Sbjct: 176 TAIILDTFLNQKPLHASDDEDAKLYCIYVAIGQKRSTVAQFVKTLEDAGALDYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++  L+ +AP     + E+F     + ++  D +T+ A + R+++      P    +P
Sbjct: 236 ASDAAPLQYLAPFAGCAMGEFFRDNSMHAVIGYDDLTKQAVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G    TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNDDHGKGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGPIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 TTQRLLNRGARLTELLKQPQF 433


>gi|108762039|ref|YP_635141.1| F0F1 ATP synthase subunit alpha [Myxococcus xanthus DK 1622]
 gi|108465919|gb|ABF91104.1| ATP synthase F1, alpha subunit [Myxococcus xanthus DK 1622]
          Length = 552

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 93/424 (21%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  +DY K   V + G + S+      +  L +    G+ V          G V+ + 
Sbjct: 49  IREQIKDYGKKVTVAETGTVLSVGDGIARIYGL-EGALAGELVEFANG---VQGLVLNLE 104

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G  + I  GD V    +   +       GRV++ LGKP+DG   +   +  
Sbjct: 105 EDNVGVAIMGDFQAIREGDTVKRTQQIASVPVGKELLGRVVDPLGKPLDGKGPIAATETR 164

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  K P  ++R+ V +  +TGI+ +D   P+  GQR  +      GK+ +      + 
Sbjct: 165 R-LEVKAPGIVSRKSVHEPLQTGIKALDALVPVGRGQRELIIGDRQTGKTAVAIDTIINQ 223

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V + +E          + VV + + +   ++  AP   V + 
Sbjct: 224 KGLNVYCIYVAIGQKQSTVAQVVEKLNRYGAMEYTTVVASNASDPAPMQFFAPYAGVAMG 283

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF     + L++ D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 284 EYFRDNKMHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYVHSRLLERAAKLSD 343

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E+G  ++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 344 EEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFAGVRPAINVGLSVSRV 403

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  ++   + ++ E   +     +   +D    + + +   + + LKQ 
Sbjct: 404 GSAAQIKAMKQVAGTMKLELAQYRE---LAAFAQFGSDLDKATQETLARGARMVELLKQG 460

Query: 421 PSDL 424
             + 
Sbjct: 461 QYEP 464


>gi|23502654|ref|NP_698781.1| F0F1 ATP synthase subunit alpha [Brucella suis 1330]
 gi|81752065|sp|Q8FYR3|ATPA_BRUSU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|23348662|gb|AAN30696.1| ATP synthase F1, alpha subunit [Brucella suis 1330]
          Length = 509

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKEQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLESDNVGVVIFGADRDIKEGDVVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKERRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQKPIHDNGPDKDKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E G  ++TA+  +   G++ +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDENGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETN 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + +  E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQHRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|209543483|ref|YP_002275712.1| F0F1 ATP synthase subunit alpha [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531160|gb|ACI51097.1| ATP synthase F1, alpha subunit [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 512

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 106/430 (24%), Positives = 176/430 (40%), Gaps = 21/430 (4%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q    +   + + + G I S+      V  L Q V  G+ V   G      G  + 
Sbjct: 10  DILKQQIATFDTPVDIAETGTILSVGDGIARVYGL-QNVQAGEMVEFPGSGQR--GMALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G   ++  GD V   G     P      GRV++ LG PIDG   L    
Sbjct: 67  LENDNVGVVIFGDDADMREGDTVSRTGAVVEVPTGKALLGRVVDGLGNPIDGKGPLVGDV 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
           +      K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK      T++
Sbjct: 127 VMKRADVKAPGIMPRQSVGEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIV 186

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +  + +   D       I   +G++   V + +           S+VV AT+ +   ++ 
Sbjct: 187 AQKSVNALGDDKKSLYCIYVAIGQKRSTVAQLVRTLEETGAMEYSIVVAATASDPAPMQY 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A  + EYF   G + L++ D +++ A + R+++      P    YP  VF    R
Sbjct: 247 LAPYAACAMGEYFRDNGMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 306

Query: 293 LLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     + +  I  +V SI DG + L   L   G  P 
Sbjct: 307 LLERAAKMSDEYGAGSLTALPVIETQAGDVSAYIPTNVISITDGQVFLETDLFYRGIRPA 366

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K + + 
Sbjct: 367 VNVGGSVSRVGSAAQIKAMKQVAGKIKLELAQYRE---MAAFSQFASDLDPATQKQLARG 423

Query: 411 PIIYDFLKQS 420
             + + LKQ 
Sbjct: 424 ARLVELLKQP 433


>gi|254501756|ref|ZP_05113907.1| ATP synthase F1, alpha subunit [Labrenzia alexandrii DFL-11]
 gi|222437827|gb|EEE44506.1| ATP synthase F1, alpha subunit [Labrenzia alexandrii DFL-11]
          Length = 509

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  K+      V + G + S+      V  L + V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKSFGQEAEVSEVGQVLSVGDGIARVYGLDK-VQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --IKGMALNLESDNVGVVIFGSDRDIKEGDTVKRTGAIVEVPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIEATEKRR-VDVKAPGILPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +          D     I   VG++   V +F++    +   + S+V+ AT
Sbjct: 176 TAIILDTFLNQKPLHAGNDEDAKLYCIYVAVGQKRSTVAQFVKTLEDNGALEYSIVIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP     + E+F   G + ++  D +T+ A + R+++      P    +P
Sbjct: 236 ASEAAPLQFLAPFAGCAMGEFFRDNGMHAVIGYDDLTKQAVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++ G    TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNEDHGKGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGPIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 TTQRLLNRGARLTELLKQPQF 433


>gi|332023250|gb|EGI63505.1| ATP synthase subunit alpha, mitochondrial [Acromyrmex echinatior]
          Length = 546

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G    I
Sbjct: 63  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDRHI 118

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   L    L   I +K P  + R  
Sbjct: 119 KEGDIVKRTGAIVDVPVGEQLLGRVVDALGNPIDGKGPLN-NKLRFRIGTKAPGIIPRVS 177

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-----LLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK+      +++    +D  +       
Sbjct: 178 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDSIINQKRFNDGGEEKKKLYC 237

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +  +V+V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 238 IYVAIGQKRSTVAQIVKRLTDSAAINYTVIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 297

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 298 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNENLGGGSL 357

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 358 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 417

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 418 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDPATQQLLNRGVRLTELLKQGQ 468


>gi|157364752|ref|YP_001471519.1| flagellar protein export ATPase FliI [Thermotoga lettingae TMO]
 gi|157315356|gb|ABV34455.1| flagellar protein export ATPase FliI [Thermotoga lettingae TMO]
          Length = 436

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 169/434 (38%), Positives = 247/434 (56%), Gaps = 10/434 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           LE L    E   ++ +   G ++ I     TV        LG+           L +V+ 
Sbjct: 8   LELLKSRIER--EDFLKMNGRVNRIIG--LTVESTGPDAFLGELCKLNLDGKKPLCEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
                V + P+        G  V+   R   +  S    GR+++ LG+PIDG   + K  
Sbjct: 64  FRDGKVLLMPLEDLSGAKHGTFVYKTNRRLDVGVSEDMKGRIVDGLGRPIDGKPLIAKH- 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +++  P  + R R+      G+R ID F  +  GQRIG+FAGSG+GKSTLL M AR
Sbjct: 123 -RYPLINSAPHPLKRSRITAPLPVGVRAIDGFITIGKGQRIGIFAGSGVGKSTLLGMIAR 181

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +   D  +I+L+GERGREVREFIE  L   ++KS+VVV+TSD+  ++R  A  TA +IAE
Sbjct: 182 NTVADVNVIALIGERGREVREFIEKDLAKGIEKSIVVVSTSDQPALMRSKALYTATSIAE 241

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF   G +VLL++DS+TR+A + REI    GE P ARGYP SVF+ +P +LER G S+K 
Sbjct: 242 YFRDLGYDVLLMVDSLTRWAMAQREIGLAIGEPPTARGYPPSVFAGIPGILERAGNSDK- 300

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA+ +VLV+ D+ N+PI+D+VRS++DGHI+L+R L+E   YP +D LASVSRL   
Sbjct: 301 -GSITAIYTVLVEADDFNEPISDTVRSVVDGHIMLSRRLSELNHYPAIDVLASVSRLMVD 359

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               D  +   +L +L+  + E +D+  +G Y+PG +  +D+A+  +  I  FLKQ   +
Sbjct: 360 IVGHDHLEASRNLRNLMATYYEAKDLIDVGAYKPGSNPQIDRAIKMIDPINSFLKQRIDE 419

Query: 424 LSSE-DVFQEITKK 436
                D   E+ K 
Sbjct: 420 KPDYKDTVAELLKL 433


>gi|113170458|ref|YP_717250.1| AtpA [Ostreococcus tauri]
 gi|118573483|sp|Q0P3K5|ATPA_OSTTA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|112806865|emb|CAL36372.1| AtpA [Ostreococcus tauri]
          Length = 504

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 105/431 (24%), Positives = 187/431 (43%), Gaps = 15/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y++   VV  G +  +      +  L Q V  G+ +  Q      +G  + 
Sbjct: 11  SVIRQQIEQYTQEAQVVNVGTVLQVGDGIARIYGL-QKVMSGELLEFQDG---TIGVALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  GD V   G+  ++     + GRV++AL +PIDG   + K D
Sbjct: 67  LETDNVGAVLMGDGLKIQEGDSVKATGKIAQVPVGEAFLGRVVDALARPIDGRGDI-KAD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S  P  + R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 126 GTRLIESPAPGIIARRSVYEPLQTGLVSIDAMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           +++V  T+D    L+ +AP T  +
Sbjct: 186 NQKGGDVICVYVAIGQKASSVAQIVTTLTNAGAMDYTIIVSETADSPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRATLIIYDDLSKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  +   G + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDALGEGSMTALPIIETQGGDVSAYIPTNVISITDGQVFLSADLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGTLKLELAQFAELE---AFSQFASDLDQATQNQLARGARLRELLK 422

Query: 419 QSPSDLSSEDV 429
           Q+ +   S D+
Sbjct: 423 QAQNQPLSVDM 433


>gi|162146518|ref|YP_001600977.1| F0F1 ATP synthase subunit alpha [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|190358174|sp|A9H9A4|ATPA_GLUDA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161785093|emb|CAP54637.1| ATP synthase subunit alpha [Gluconacetobacter diazotrophicus PAl 5]
          Length = 513

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 106/430 (24%), Positives = 176/430 (40%), Gaps = 21/430 (4%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q    +   + + + G I S+      V  L Q V  G+ V   G      G  + 
Sbjct: 11  DILKQQIATFDTPVDIAETGTILSVGDGIARVYGL-QNVQAGEMVEFPGSGQR--GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G   ++  GD V   G     P      GRV++ LG PIDG   L    
Sbjct: 68  LENDNVGVVIFGDDADMREGDTVSRTGAVVEVPTGKALLGRVVDGLGNPIDGKGPLVGDV 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
           +      K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK      T++
Sbjct: 128 VMKRADVKAPGIMPRQSVGEPMQTGIKAIDALVPIGRGQRELIIGDRQTGKTAILIDTIV 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +  + +   D       I   +G++   V + +           S+VV AT+ +   ++ 
Sbjct: 188 AQKSVNALGDDKKSLYCIYVAIGQKRSTVAQLVRTLEETGAMEYSIVVAATASDPAPMQY 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP  A  + EYF   G + L++ D +++ A + R+++      P    YP  VF    R
Sbjct: 248 LAPYAACAMGEYFRDNGMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     + +  I  +V SI DG + L   L   G  P 
Sbjct: 308 LLERAAKMSDEYGAGSLTALPVIETQAGDVSAYIPTNVISITDGQVFLETDLFYRGIRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K + + 
Sbjct: 368 VNVGGSVSRVGSAAQIKAMKQVAGKIKLELAQYRE---MAAFSQFASDLDPATQKQLARG 424

Query: 411 PIIYDFLKQS 420
             + + LKQ 
Sbjct: 425 ARLVELLKQP 434


>gi|240851268|ref|YP_002972671.1| ATP synthase alpha chain [Bartonella grahamii as4aup]
 gi|240268391|gb|ACS51979.1| ATP synthase alpha chain [Bartonella grahamii as4aup]
          Length = 511

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 29/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ ++  KN      V + G++ S+      V  L   V  G+ V      
Sbjct: 1   MDIRPSEISKILKEQIKNFDQKAEVSEIGWVLSVGDGIARVYGL-DNVQAGEMVAFPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --VRGMSLNLEVDNVGVVIFGSDRDIREGDCVKRLGAIVDVPVGPALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIKATE-RRRVDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMF------------ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
           + +L                R       I   +G++   V +F++        + S++V 
Sbjct: 176 TAILLDTFLNQKPFHEKGAGREQDKVYCIYVAIGQKRSTVAQFVKVLEERGALEYSIIVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   L+ +APL    + EYF   G + L+  D +++ A + R+++      P    
Sbjct: 236 ATASDPAPLQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +
Sbjct: 356 TNLFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D    + +++   + + LKQ   
Sbjct: 413 DASTQRLLNRGARLTELLKQPQF 435


>gi|302392393|ref|YP_003828213.1| type III secretion system ATPase, FliI/YscN [Acetohalobium
           arabaticum DSM 5501]
 gi|302204470|gb|ADL13148.1| type III secretion system ATPase, FliI/YscN [Acetohalobium
           arabaticum DSM 5501]
          Length = 439

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 171/436 (39%), Positives = 247/436 (56%), Gaps = 14/436 (3%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIR 64
            LA+  E +S  LV   G IS +  +          V LG+  + +  ++      +V+ 
Sbjct: 10  KLAKELESWS--LVNNFGKISQVVGLIIESEG--PDVTLGEICLIKSDSNSEPIQAEVVG 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              + V + P+G    I  G  V       ++       G V++ LG P+   D L +  
Sbjct: 66  FRDNKVLLMPLGEMGGIGPGCKVEATNEPLKVKVGDELLGHVLDGLGNPLTDLD-LDQLH 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + +  P  + RQR+ +    GIR ID       GQR+G+FAGSG+GKSTLL M AR
Sbjct: 125 KEYSVNNPPPNPLVRQRITEPLSVGIRSIDGLLTCGRGQRLGIFAGSGVGKSTLLGMIAR 184

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D  +I L+GERGREVREFIED LG + LK+SVVVVATSD+  ++R    L   TIA
Sbjct: 185 NTAADVNVIGLIGERGREVREFIEDDLGTEGLKRSVVVVATSDQPALVRLKGALVTTTIA 244

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G +V+L++DSITRFA + RE+    GE P  RGY  SVF+ LP+LLER G +E 
Sbjct: 245 EYFRDQGQDVMLMMDSITRFARAQREVGLAVGEPPATRGYTPSVFAMLPKLLERAGNNEV 304

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G IT + +VLV+GD+ N+PIAD+VR I+DGHI L+R LA +  YP VD L SVSR+ D
Sbjct: 305 --GTITGLYNVLVEGDDMNEPIADAVRGIVDGHITLSRDLATQNHYPAVDVLESVSRVMD 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              + + +     L  ++  +EE++D+  IG Y  G +  LD A+ ++  + DFL+Q   
Sbjct: 363 DVVTEEHQTAAQQLREVLATYEESKDLVNIGAYEEGNNPELDYALSKLDEVNDFLQQGVE 422

Query: 423 DLSSEDVFQEITKKLQ 438
           + S    F+   ++L+
Sbjct: 423 EKSD---FETTLQQLK 435


>gi|269784695|ref|NP_001161449.1| ATP synthase subunit alpha, mitochondrial precursor [Nasonia
           vitripennis]
          Length = 546

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 105/438 (23%), Positives = 189/438 (43%), Gaps = 27/438 (6%)

Query: 3   KNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           +    ++ + E+      SK  + + G + SI      V  L + +   + V     +S 
Sbjct: 39  RRSAEISSILEERILGASSKANLEETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSG 94

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGD 116
             G  + +  D V I   G    I  GD+V   G    +       GRV++ALG PIDG 
Sbjct: 95  LKGMALNLEPDNVGIVVFGNDRHIKEGDIVKRTGAIVDVPVGNELLGRVVDALGNPIDGK 154

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-- 174
             L    L   I +K P  + R+ V +  +TGI+ +D   P+  GQR  +      GK  
Sbjct: 155 GPLN-NKLRFRIGTKAPGIIPRESVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTA 213

Query: 175 ---STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
               T+++    ++  D       I   VG++   V + ++       +  S++V AT+ 
Sbjct: 214 LAIDTIINQKRFNEGGDENKKLYCIYVAVGQKRSTVAQIVKRLTDAGAINYSIIVSATAS 273

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           ++  L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    YP  
Sbjct: 274 DAAPLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGD 333

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER     K    G++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 334 VFYLHSRLLERAAKMNKSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELF 393

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            +G  P ++   SVSR+   A +   K++  S+   + ++ E   +     +   +D   
Sbjct: 394 YKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAAT 450

Query: 404 DKAVHQVPIIYDFLKQSP 421
            + +++   + + LKQ  
Sbjct: 451 QQLLNRGVRLTELLKQGQ 468


>gi|315497306|ref|YP_004086110.1| ATP synthase f1, alpha subunit [Asticcacaulis excentricus CB 48]
 gi|315415318|gb|ADU11959.1| ATP synthase F1, alpha subunit [Asticcacaulis excentricus CB 48]
          Length = 510

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 105/427 (24%), Positives = 181/427 (42%), Gaps = 21/427 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           AQ+A    +  V   G + S+      V  L Q V  G+ V          G  + +  D
Sbjct: 14  AQIAGFGEEADVSDVGSVLSVGDGIARVHGLDQ-VQAGEMVSFPKAG--VKGMALNLEKD 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G   E+  GD V   G   ++       GRV+N LG+PIDG   +   +    
Sbjct: 71  NVGVVIFGEDREVREGDEVRRLGEIVQVPVGKGLLGRVVNPLGEPIDGKGPIEATEFRR- 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R+ V +  +TGI+ ID   P+  GQR  +      GK       +L+  A
Sbjct: 130 VDVKAPGIIPRKSVHEPVQTGIKAIDTLIPVGRGQRELIIGDRQTGKTAVAIDAILNQKA 189

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            +   D       I  ++G++   V + ++    +     +++V AT+ E   L+ +AP 
Sbjct: 190 ANAGTDESAKLYCIYVVIGQKRSTVAQIVKSLEENGALDYTIIVAATASEPAPLQYLAPF 249

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 250 AGCAMGEFFRDNGMHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 309

Query: 297 IGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+  
Sbjct: 310 AAKLNDENGAGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFYQGIRPAVNVG 369

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  S+   + ++ E   +     +   +D    + + +   + 
Sbjct: 370 LSVSRVGSAAQIKAMKQVAGSIKGDLAQYRE---MAAFAKFGSDLDAATQRLLARGARLT 426

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 427 ELLKQPQ 433


>gi|189426221|ref|YP_001953398.1| F0F1 ATP synthase subunit alpha [Geobacter lovleyi SZ]
 gi|226739890|sp|B3EA03|ATPA_GEOLS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189422480|gb|ACD96878.1| ATP synthase F1, alpha subunit [Geobacter lovleyi SZ]
          Length = 502

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 108/432 (25%), Positives = 183/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++ +           V + G I SI      +  L+     G+ +   G  
Sbjct: 1   MELRAEEISEIIKKQINEYGKEVEVSETGTIISIGDGIARIHGLA-GAMAGELLEFPGGV 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           S   G V+ +  D V    +G   EI  GD V   GR   +       GRV+NA+G+PID
Sbjct: 60  S---GMVLNLEEDNVGAAILGEFAEIKEGDTVKRTGRITEVPVGDALVGRVVNAIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S ++  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINSSTFS-KVEIKAPGIVARKSVHQPMATGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +           ++VV AT+ ES  L+
Sbjct: 176 TAVAVDTIINQKGGDVICIYVAIGQKRSTVAQVVSKLTEHGAMDYTIVVAATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ EYF     + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYTGVTMGEYFRDNKKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKLSDECGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A +   K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQTKSMKQVAGTLRLNLAQYRE---MAAFAQFGSDLDKATQMQLAR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GERLVEILKQPQ 424


>gi|113170490|ref|YP_717281.1| Atp1 [Ostreococcus tauri]
 gi|112806897|emb|CAL36403.1| unnamed protein product [Ostreococcus tauri]
          Length = 508

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 186/441 (42%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  +   L+ L E    N        + G + S+      V  L++    G+ V     +
Sbjct: 1   MSLSATELSNLLEQRISNYYSDLNIDEIGRVLSVGDGIARVYGLNKIQS-GEMVEF---D 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +  D V I   G    I  GD+V   G    +       GRV++ LG PID
Sbjct: 57  SGIKGMALNLENDNVGIVCFGSDTNIREGDIVKRTGSIVDVPVGKGMLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIPNV-TPRRVELKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIEDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYL-GDNLKKSVVVVAT 223
                 T+++    +D  D       +   VG++   V + ++     + L+ S++V AT
Sbjct: 176 TAIAIDTIINQRTINDSNDESKKLYCVYVAVGQKRSTVAQLVKTLQDKNALEYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   +AEYF   G + L+I D +++ + + R+++      P    +P
Sbjct: 236 ASDPAPLQFLAPYSGCAMAEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  V   G + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERSAKMSDEVGGGSMTALPVVETQGGDVSAYIPTNVISITDGQIFLETE 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 356 LFFKGIRPAINVGLSVSRVGSAAQLKAMKQVSGSLKLELAQYRE---VAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
                +++   + + LKQ   
Sbjct: 413 ATQYLLNRGSRLTEVLKQGQF 433


>gi|290490180|gb|ADD31497.1| ATP synthase CF1 alpha subunit protein [Nelumbo nucifera]
          Length = 507

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 185/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + D
Sbjct: 425 QSAPLTVD 432


>gi|289423336|ref|ZP_06425144.1| ATP synthase F1, alpha subunit [Peptostreptococcus anaerobius
           653-L]
 gi|289156267|gb|EFD04924.1| ATP synthase F1, alpha subunit [Peptostreptococcus anaerobius
           653-L]
          Length = 498

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 113/433 (26%), Positives = 186/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  KN      +   G + S+     +V  L +    G+ +   G  
Sbjct: 1   MNLKPEEISSIIKNQIKNYENKIKLTDTGSVLSVGDGIASVYGL-ENAMSGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G  + +  ++V    +G   +I  GD+V   GR   +       GRV+NALG+ ID
Sbjct: 58  -NIFGMALNLEEEVVGAVILGDDTDIKEGDIVKRTGRIVEVPVGDAMIGRVVNALGQAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D +  + +  P  M+R+ V +  +TGI+ ID   P+  GQR  V      GK
Sbjct: 117 GKGEI-AADKTRPVEAPAPGIMDRKSVFEPLQTGIKSIDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +++L     +  D     I   +G++   V + +           ++VV AT+ ES  L+
Sbjct: 176 TSILVDTIINQKDKDVICIYVAIGQKRSTVAQLVSTLEEHGAMDYTIVVSATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E F   G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGAAIGEEFMYNGKHVLIVYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     +    I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSMTALPVIETQAGDVAAYIPTNVISITDGQIYLQPELFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VDP  SVSR+   A     KK+  +L     ++ E   +     +   +D    + + Q
Sbjct: 356 AVDPGISVSRVGGSAQIKSMKKIAGTLKLAYSQYRE---LAAFAQFGSDLDEDTKRRLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ   
Sbjct: 413 GQRIVEVLKQGEH 425


>gi|326792681|ref|YP_004310502.1| ATP synthase F1 subunit alpha [Clostridium lentocellum DSM 5427]
 gi|326543445|gb|ADZ85304.1| ATP synthase F1, alpha subunit [Clostridium lentocellum DSM 5427]
          Length = 503

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 107/432 (24%), Positives = 185/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +D  KN        + G + ++      V  L + +  G+ +   G  
Sbjct: 1   MNLRPEEISSIIKDQIKNYKAHLQAEEVGTVITVGDGIARVHGLEKAMS-GELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V  +  D + +  +G  + I  GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EVYGMVQNLEEDNIGVVLLGSDQNIKEGDTVKSTGRVVEVPVGDALSGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +       ++R+ V+   +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TDKFRPVERVASGVIDRKSVDTPLQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +      D +  + +VVAT+ E+  L+
Sbjct: 176 TAIAIDTIINQKGKDCLCIYVAIGQKASTVAQLVNALEKADAMSYTTIVVATASEAAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ E +  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVTMGEEWMEQGKDVLIVYDDLSKHAVAYRTMSLLLHRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAARLSDELGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLETELFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     K++   +   + ++   R +     +   +D     A+ Q
Sbjct: 356 AVNPGLSVSRVGGAAQIKAMKQVAGPIRTELAQY---RSLAAFAQFGSDLDTATKNALTQ 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GERITEILKQPQ 424


>gi|237756389|ref|ZP_04584934.1| ATP synthase F1, alpha subunit [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691454|gb|EEP60517.1| ATP synthase F1, alpha subunit [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 504

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 102/431 (23%), Positives = 180/431 (41%), Gaps = 14/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE L +  E++  +  ++  G +  +      +  L +   +G+ +  +   S  +G V 
Sbjct: 10  LENLNKQIEEFQVSANLEEIGTVIQVGDGVARIYGLEK-AMMGEMLEFE---SGIVGVVF 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V    +G    +  G +V   G+   +       GRV++ LG PIDG   L   
Sbjct: 66  NLEEDNVGAVLLGSDVAVKEGSIVKRTGKILSVPVGKGLLGRVVDGLGNPIDGKGPLTDI 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
                +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++
Sbjct: 126 AYYSPVEKIAPGVVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTIAIDTI 185

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
             +       I   +G++   V   +E          + VV ATS +   ++ +AP    
Sbjct: 186 LNQKGQGVYCIYVAIGQKRANVVHIVETLQKHGAMEYTTVVAATSSDPATMQYIAPFVGC 245

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TI EYF   G + L+I D +T+ A++ R+++      P    YP  VF    RLLER   
Sbjct: 246 TIGEYFRDNGMHALVIYDDLTKHAYAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAK 305

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++   SV
Sbjct: 306 LNDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLEADLFYKGIRPAINVGISV 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++ E         +   +D      + +   + + L
Sbjct: 366 SRVGGAAQIKAMKQVAGTLRLDLAQYRELE---AFVQFASELDKATQAQIARGQRMVELL 422

Query: 418 KQSPSDLSSED 428
           KQ P+     +
Sbjct: 423 KQPPNQPVPVE 433


>gi|149186091|ref|ZP_01864405.1| F0F1 ATP synthase subunit alpha [Erythrobacter sp. SD-21]
 gi|148830122|gb|EDL48559.1| F0F1 ATP synthase subunit alpha [Erythrobacter sp. SD-21]
          Length = 509

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 100/447 (22%), Positives = 183/447 (40%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ +D   N      V + G + S+      +  L + V  G+ +      
Sbjct: 1   MDIRAAEISKVIKDQIANFGSDAEVSEVGSVLSVGDGIARIHGLDK-VQAGEMIEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V     G   +I+ GD V   G    +       GRV++ALG PID
Sbjct: 59  --TQGMALNLEADNVGAVIFGADTDIAEGDTVKRTGTIVDVPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  ++G++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIEATE-RKRVEVKAPGIIPRESVSEPVQSGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           S +      +                I   VG++   V + ++    +     S+VV AT
Sbjct: 176 SAVAIDTFINQKDAHQGDDEKKKLYCIYVAVGQKRSTVAQIVKSLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T   + E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGCAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNGDNGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGGAAQTKAMKKVSGSMKLDLAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ        +
Sbjct: 413 ATQKLLNRGARLTELLKQPQFSPMPFE 439


>gi|319407768|emb|CBI81415.1| ATP synthase alpha chain [Bartonella sp. 1-1C]
          Length = 511

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 107/438 (24%), Positives = 182/438 (41%), Gaps = 30/438 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K ++   Q AE      V + G++ S+      V  L   V  G+ V          G
Sbjct: 12  LKKQIKNFDQKAE------VSEVGWVLSVGDGIARVYGL-DNVQAGEMVAFSNG---VQG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V I   G   +I  GD V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLETDNVGIVIFGSDRDIREGDTVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K +    +  K P  + RQ V +   TG++VID   P+  GQR  V      GK+ +L 
Sbjct: 122 -KANERRRVDVKAPGIIPRQSVHEPMSTGLKVIDALIPIGRGQRELVIGDRQTGKTAILL 180

Query: 180 MFARSDCFDK------------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
               +                  I   +G++   V +F++          S++V AT+ +
Sbjct: 181 DTFLNQKHFHDNDTEEDQDKVYCIYVAIGQKRSTVAQFVKVLEERGALDYSIIVAATASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ +APL    + EYF   G + L+  D +++ A + R+++      P    YP  V
Sbjct: 241 PAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      + G+   TA+  +    ++ +  I  +V SI DG I L  +L  
Sbjct: 301 FYLHSRLLERAAKLNADYGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D    
Sbjct: 361 QGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDASTQ 417

Query: 405 KAVHQVPIIYDFLKQSPS 422
             +++   + + LKQ   
Sbjct: 418 HLLNRGARLTELLKQLQF 435


>gi|89897660|ref|YP_521147.1| ATP synthase F1 alpha subunit [Desulfitobacterium hafniense Y51]
 gi|119367952|sp|Q24MN9|ATPA_DESHY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|89337108|dbj|BAE86703.1| ATP synthase F1 alpha subunit [Desulfitobacterium hafniense Y51]
          Length = 502

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 176/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   + VV  G +  +      V  L + +  G+ +   G      G  + 
Sbjct: 10  SIIKQQIERYDSAVEVVDVGTVIQVGDGIARVHGLEKAMS-GELLEFPGG---IYGMAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D +    +G   EI  GD V   GR   +       GRV+NALG+PIDG   + K D
Sbjct: 66  LEEDNIGCIILGKFTEIREGDQVKRTGRIVEVPVGEAMIGRVVNALGQPIDGKGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I +  P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRPIENTAPGVVYRKSVHEPLQTGLKSIDAIVPIGRGQRELIIGDRQTGKTAVAVDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   VG++   V   ++          S+VV AT+ E   +  +AP +   
Sbjct: 185 NQKGKDVICIYVAVGQKASTVAGVVKTLADHGAMDYSIVVSATASEPAPMLYIAPYSGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIYDDLTKQAAAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SPDLGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAGFRPAINVGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + ++ E   +     +   +D I    + +   + + LK
Sbjct: 365 RVGGSAQIKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDKITQMRLTRGERMMEILK 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QKQYEP 427


>gi|330850617|ref|YP_004376498.1| ATP synthase CF1 alpha subunit [Ptilidium pulcherrimum]
 gi|302024746|gb|ADK89592.1| ATP synthase CF1 alpha subunit [Ptilidium pulcherrimum]
          Length = 507

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 188/424 (44%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    E Y++ + +V  G +  +      +  L + V  G+ V  +    + +G  + 
Sbjct: 11  SVIRTQIEQYNQEVKIVNIGTVLQVGDGIARIYGLDK-VMAGELVEFE---DNTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGVVLMGDGLAIQEGSSVKATGQIAQIPVSEAYLGRVVNALAQPIDGKGQIAASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + ++      + ++VV  T++    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVNNFEERGALEYTIVVAETANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L++ D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRKQHTLIVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSKLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|171915738|ref|ZP_02931208.1| type III secretion system ATPase [Verrucomicrobium spinosum DSM
           4136]
          Length = 444

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 156/426 (36%), Positives = 237/426 (55%), Gaps = 12/426 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYIC 73
           +   +V  G +  +      +   +  V +G+    +   +    + +V+    ++V + 
Sbjct: 22  TARPLVPRGRVVQVVGTI--IQAYAPGVKIGELCHLRNPWQEQGLMAEVVGFAKNLVLLT 79

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G  E IS    V   G   R+       GRV++ LG P DG   + + +    + +  
Sbjct: 80  PLGELEGISSSTEVTPTGEVHRVPVGPAMLGRVLDGLGNPSDGKGPI-EIEEYYAVTADP 138

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P AM RQ +      G+R +D       GQR+G+FA +G GKSTLLS   R+   D V++
Sbjct: 139 PNAMTRQLISTPIHLGVRALDGLLTCGEGQRMGIFAAAGGGKSTLLSQIIRNTEADIVVL 198

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           SL+GERGREVREF+  D   D +K++V V+ATSD   + R      A  IAEYF  KG  
Sbjct: 199 SLIGERGREVREFLERDLGEDGVKRAVTVIATSDRPAMERLKCAYVATAIAEYFRDKGRK 258

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA ++REI   +GE P  RG+P SVF+ LP+++ER G S    G+ITA+ 
Sbjct: 259 VLLLMDSVTRFARALREIGLAAGEPPTRRGFPPSVFATLPKMMERAGCSAN--GSITALY 316

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+  +P+AD  RSILDGHI+L+R L     YP +D LASVSRL     + D ++
Sbjct: 317 TVLVEGDDMTEPVADETRSILDGHIILSRKLGSANHYPAIDVLASVSRLMTAIATPDHQR 376

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               L +L+ +++E   +  IG Y+ G D   D+A+ +V  I +FLKQ   + S    F+
Sbjct: 377 AAGKLRNLLAKYQEVELLVRIGEYKKGSDASSDEAIAKVDAINNFLKQGLREQS---TFE 433

Query: 432 EITKKL 437
           +  + +
Sbjct: 434 QTLQAM 439


>gi|163761387|ref|ZP_02168461.1| F0F1 ATP synthase subunit alpha [Hoeflea phototrophica DFL-43]
 gi|162281382|gb|EDQ31679.1| F0F1 ATP synthase subunit alpha [Hoeflea phototrophica DFL-43]
          Length = 509

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD+V   G    +       GRV++ALG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDRDIKEGDIVKRTGAIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  M R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-KAKKRARVDVKAPGIMPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+V+ AT
Sbjct: 176 TAIILDTFLNQKSIHENGPEGEKLYCVYVAVGQKRSTVAQFVKVLEDRGALEYSIVIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S  L+ +AP     + EYF   G + L+  D +++ A + R+++      P    YP
Sbjct: 236 ASDSAPLQFLAPFAGCAMGEYFRDNGKHALIAYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++ G+   TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNEDNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETE 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ+  
Sbjct: 413 ATQRLLNRGARLTELLKQAQF 433


>gi|154249443|ref|YP_001410268.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153379|gb|ABS60611.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum
           Rt17-B1]
          Length = 443

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 171/439 (38%), Positives = 258/439 (58%), Gaps = 12/439 (2%)

Query: 1   MQKNLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +Q+N++ L ++ ED  K L      G +  I     T+        LG+       N   
Sbjct: 6   LQENIKFL-EIIEDKVKKLNPYEYAGEVQKIIG--LTIESRGPDAALGELCKILVGNKKA 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+    D+  + P+     +  G  V   GR   +       GRVI+ALG+PIDG  
Sbjct: 63  LAEVVGFKEDLTILMPLEDVTGLKKGCEVLKTGRTVSVPVGEELKGRVIDALGRPIDGKR 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K     +I+S+ P  + R+R+ +    G+R ID F  L  GQRIG+FAGSG+GKSTL
Sbjct: 123 LVLKE--YRQIVSEAPNPLIRKRILEPLPVGVRAIDGFLTLGKGQRIGIFAGSGVGKSTL 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+L+GERGREVREFI +D   + +K+SVVVV+TSD+  +LR  A L
Sbjct: 181 LGMIARNTTADINVIALIGERGREVREFIEKDLGEEGIKRSVVVVSTSDQPALLRIKALL 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA TIAEYF  KG  V+L++DS+TR+A + RE+    GE P  RGYP SVF++LP++LER
Sbjct: 241 TATTIAEYFRDKGYAVMLMVDSLTRWAMAQREVGLAIGEPPTTRGYPPSVFAQLPKILER 300

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+IT + +VLV+ D+ N+PI+D+VR I+DGHI+L+R LAE   +P +D L S
Sbjct: 301 AGNSDK--GSITGIYTVLVEADDFNEPISDTVRGIVDGHIILSRKLAESNHFPAIDVLMS 358

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL       +  +   ++  +I  + + +D+  +G Y+ G +  +DK++  +  I  F
Sbjct: 359 ISRLMVDITKPEHIQSARAIRDIIATYNDAKDLIDVGAYKKGANPKIDKSIELIDEINKF 418

Query: 417 LKQSPSD-LSSEDVFQEIT 434
           L+Q   + +S +D    + 
Sbjct: 419 LRQGIKEKMSFQDTVDYLI 437


>gi|114706545|ref|ZP_01439446.1| F0F1 ATP synthase subunit alpha [Fulvimarina pelagi HTCC2506]
 gi|114537937|gb|EAU41060.1| F0F1 ATP synthase subunit alpha [Fulvimarina pelagi HTCC2506]
          Length = 509

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 178/441 (40%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + ++  KN      V + G + SI      V  L      G+ V     +
Sbjct: 1   MDIRPAEISDILKNQIKNFGAEAEVSEVGQVLSIGDGIARVYGL-DNCQAGEMVEF---S 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D V +   G    I  GD V   G    +       GRV++ LG PID
Sbjct: 57  DGIQGMVLNLEADNVGVVVFGSDRNIKEGDTVKRTGAIVEVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIESSE-NRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           S +L     +                I   VG++   V +F+         + S+VV AT
Sbjct: 176 SAILLDTILNQKPAHDEGRENDKLFCIYVAVGQKRSTVAQFVRTLEERGALQYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP    TI EYF   G + ++  D +++ A + R+I+      P    YP
Sbjct: 236 ASDPAPMQYIAPFVGCTIGEYFRDNGMHAMIGYDDLSKQAVAYRQISLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G  ++TA+  +     + +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLSDDHGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETT 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E         +   +D 
Sbjct: 356 LFYQGVRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYREME---AFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + + +   + + LKQ   
Sbjct: 413 STQRLLKRGQRLTELLKQPQF 433


>gi|309775241|ref|ZP_07670251.1| ATP synthase F1, alpha subunit [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916993|gb|EFP62723.1| ATP synthase F1, alpha subunit [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 506

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 110/435 (25%), Positives = 187/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAED----YSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +++L +D    Y ++L + + G I ++      +  L Q    G+ +   G  
Sbjct: 1   MSLKPEEISKLIKDQIRRYDEDLEIDETGTIITVGDGIALIYGL-QNAMAGELLRFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  + V    +G    I  GD V   GR   +       GRV+NALG+ ID
Sbjct: 58  -DVYGMVLNLEEEHVGAVLMGDDSNIREGDEVKRTGRIVEVPVGDGMLGRVVNALGQAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G + + K D    +    P  M R+ V +  +TG+++ID   P+  GQR  +      GK
Sbjct: 117 GGEPI-KSDKFRPVERVAPGVMTRKSVHQPIQTGLKIIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + +   K I   +G++   V + +E          + +V +T+ E   L+
Sbjct: 176 TAIAIDTIINQKENNVKCIYVAIGQKASTVAQIVEKLRSHGAMEYTTIVSSTASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +   GD+VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMENGDDVLIVYDDLSKHAVAYRTMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDELGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K++  SL   + +F E +       +   +D    + +  
Sbjct: 356 AVDSGLSVSRVGSAAQIKAMKQVSGSLKLELAQFREMQ---AFAKFGSDLDAATTETLAH 412

Query: 410 VPIIYDFLKQSPSDL 424
              +   L Q+  D 
Sbjct: 413 GERLTKLLIQNQYDP 427


>gi|254430960|ref|ZP_05044663.1| ATP synthase F1, alpha subunit [Cyanobium sp. PCC 7001]
 gi|197625413|gb|EDY37972.1| ATP synthase F1, alpha subunit [Cyanobium sp. PCC 7001]
          Length = 505

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V   G +  I      V  L Q V  G+ V  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGTVLQIGDGIARVYGL-QQVMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+   +       GRV+N+LG+PIDG   +   +
Sbjct: 67  LEDDNVGVVLMGEGGGIQEGSTVKATGKIASVPVGDAMLGRVVNSLGQPIDGKGDIATSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   ++          ++VV A++ E+  ++ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKNASVANVVDVLREKGALDYTIVVCASASEAAAMQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D      + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQAQLARGKRLREILK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|115278596|ref|YP_762500.1| ATPase subunit 1 [Tripsacum dactyloides]
 gi|114432087|gb|ABI74636.1| ATPase subunit 1 [Tripsacum dactyloides]
          Length = 816

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 179/431 (41%), Gaps = 23/431 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +++   Y+   V + G + S+      V  L++ +  G+ V      S   G  + +  +
Sbjct: 16  SRMINFYTNLKVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENE 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L   +    
Sbjct: 72  NVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRR 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 131 VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQ 190

Query: 188 D-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     N  + S++V AT+ +   L+ +AP
Sbjct: 191 MNSRGTNESETLYCVYVAIGQKRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAP 250

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 251 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 310

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 311 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 370

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  S    + ++ E   +     +   +D      +++   +
Sbjct: 371 GLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARL 427

Query: 414 YDFLKQSPSDL 424
            +  KQ   + 
Sbjct: 428 TEVPKQPQYEP 438


>gi|114329953|ref|YP_740635.1| ATP synthase CF1 alpha subunit [Nandina domestica]
 gi|122165976|sp|Q09FX6|ATPA_NANDO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|114054455|gb|ABI49848.1| ATP synthase CF1 alpha subunit [Nandina domestica]
          Length = 507

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 182/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYTTEVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIPASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADAPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|269118840|ref|YP_003307017.1| ATP synthase F1 subunit alpha [Sebaldella termitidis ATCC 33386]
 gi|268612718|gb|ACZ07086.1| ATP synthase F1, alpha subunit [Sebaldella termitidis ATCC 33386]
          Length = 501

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     E+Y  +L +   G +  +      V  L Q    G+ +      
Sbjct: 1   MKIRPEEVSKIIKTEIENYKTSLDIASVGTVVEVGDGIARVYGL-QNAMQGELLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            + +G V+ +  + V    +G    I  GD V   G+    P      GRV++ LG PID
Sbjct: 58  -NVMGMVLNLEENNVGAVLLGDFSLIKEGDTVRSTGKITQVPAGEAMLGRVVDPLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      ME+  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIEASRF-MELERKAYGIIDRQPVTEPLQTGIKAIDGMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +   +    I   +G++   V    +  +       + +V AT+ ES  L+
Sbjct: 176 TAVAVDAIVNQKGNDVYCIYVAIGQKRSTVAGLHQKLIDSGAMEYTTIVAATASESASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V++AEYF  +G +VL++ D +++ A + RE++      P    YP  +F    
Sbjct: 236 YLAPYAGVSMAEYFMEQGKHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDIFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  V     + +  I  ++ SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGAGSITALPIVETQAGDVSAYIPTNIISITDGQIFLESDLFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ S +   + ++ E   +     +   +D      +++
Sbjct: 356 AINAGISVSRVGGSAQIKAMKQVASQVKLELAQYTE---LLAFAQFGSDLDKATRDQLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I + LKQ   D    +
Sbjct: 413 GAKIMEVLKQPQYDPYPVE 431


>gi|326204623|ref|ZP_08194479.1| ATPase, FliI/YscN family [Clostridium papyrosolvens DSM 2782]
 gi|325985190|gb|EGD46030.1| ATPase, FliI/YscN family [Clostridium papyrosolvens DSM 2782]
          Length = 436

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 160/428 (37%), Positives = 245/428 (57%), Gaps = 9/428 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYIC 73
            SK  +   G +S +     T+      V +G+   +H    +    +V+    + V + 
Sbjct: 14  KSKEYIDYIGKVSKVVG--LTIESDGPQVSIGNLCNIHISGGNKLKAEVVGFKDEKVLLM 71

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    +  G  V   G   +++      GRV++ LG PID   SL +     +  +K 
Sbjct: 72  PLGEMLGMGPGSTVSANGDILKVAVGPELIGRVLDGLGNPIDDKGSL-QSKHFYKTDNKP 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+R+ +    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I
Sbjct: 131 PNPLTRKRISEPLPLGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMVARNTKADINVI 190

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+ +D   + L +SVVVVATSD+  ++R    + A  IAEYF   G +
Sbjct: 191 ALIGERGREVREFLEKDLTDEGLARSVVVVATSDQPALIRLKGAMVATAIAEYFRDCGKD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TR+A + RE+  + GE PV+RGY  SVFS  P+LLER G S+K  G+IT + 
Sbjct: 251 VLLLMDSLTRYAMAQREVGLSIGEPPVSRGYTPSVFSVFPKLLERAGTSDK--GSITGLY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+  +P+ D+ R ILDGHIVL+R++A +  YP +D LASVSR+       D KK
Sbjct: 309 TVLVDGDDLTEPVTDTARGILDGHIVLSRAMANKNHYPAIDVLASVSRVMGDIIDKDHKK 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVF 430
             + +  ++    +  D+  IG Y  G +  +D A+  +  I  FL+Q   + +S ED+ 
Sbjct: 369 SANEIKKIMAVHRDAEDLINIGAYVKGSNDKIDYAIENIDDITSFLQQETDEKVSFEDIH 428

Query: 431 QEITKKLQ 438
            ++   L+
Sbjct: 429 SQVLSLLK 436


>gi|186684957|ref|YP_001868153.1| F0F1 ATP synthase subunit alpha [Nostoc punctiforme PCC 73102]
 gi|226739918|sp|B2J058|ATPA_NOSP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|186467409|gb|ACC83210.1| ATP synthase F1, alpha subunit [Nostoc punctiforme PCC 73102]
          Length = 506

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L +    G+ +  +      +G    
Sbjct: 12  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEK-AMAGELLEFEDG---TIGIAQN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G EI  G  V   GR  +I       GRV++ALG+PIDG   +   +
Sbjct: 68  LEEDNVGAVLMGEGLEIQEGSSVTATGRIAQIPVGEALIGRVVDALGRPIDGKGDIKSSE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 128 SRL-IESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 186

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + +     +   +G++   V   ++          ++VV A++ E   L+ +AP T  T
Sbjct: 187 NQKEEDVICVYVAIGQKASTVANVVQTLQEKGAMDYTIVVAASASEPATLQYLAPYTGAT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 307 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAVNPGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 367 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKATQDQLARGQRLRELLK 423

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 424 QPQNSPLS 431


>gi|295101396|emb|CBK98941.1| ATP synthase F1 subcomplex alpha subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 506

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 110/433 (25%), Positives = 182/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++     K+        + G +  +       + L +    G+ +  +   
Sbjct: 1   MQLKPEEISKIIRAQIKHYENVIEQSEVGTVILVGDGIARASGLEK-CMAGELLQFENGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G    I  G  V   G+   +       GRV+NALG+PID
Sbjct: 60  ---YGMAQNLEENTVSIVLLGSDVGIKEGSTVKRTGKVVSVPVGEALIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I +  P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPIETTEFR-PIETSAPGIIERQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+ S    +        I   +G++   V   ++          ++VV AT+ E   L+
Sbjct: 176 TTIASDTIINQKGKDVICIYVAIGQKRSTVANLVQSLTEAGAMSYTIVVSATASELSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFMHKGKHVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLIYSQYRELQSFAQFG---SDLDADTKARLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ+ S
Sbjct: 413 GERIVEVLKQNRS 425


>gi|303240285|ref|ZP_07326804.1| flagellar protein export ATPase FliI [Acetivibrio cellulolyticus
           CD2]
 gi|302592195|gb|EFL61924.1| flagellar protein export ATPase FliI [Acetivibrio cellulolyticus
           CD2]
          Length = 438

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 162/422 (38%), Positives = 238/422 (56%), Gaps = 9/422 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYICP 74
            + +   G +S I     T+      V +G+          +    +V+    + V + P
Sbjct: 16  SDFIEYNGKVSKIVG--LTIESNGPEVNMGEVCEIHALKDKTRIKSEVVGFRDNKVILMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G    I  G  V   G     +   C  GRVI+ LG PIDG   L K + S  + +  P
Sbjct: 74  LGDMTGIGPGSTVVATGEYLSAAVGNCMVGRVIDGLGNPIDGKGDL-KVETSYPVNNDPP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R R+      G++ ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+
Sbjct: 133 HPLMRNRINDPLPLGVKTIDGLLTIGKGQRVGIFAGSGVGKSTLIGMIARNTKADINVIA 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFI +D   + L +SVVVVATSD+  ++R      A  IAEYF  +G +V
Sbjct: 193 LIGERGREVREFIEKDLKEEGLSRSVVVVATSDQPALVRLKGAFIATAIAEYFRDQGKDV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REI    GE PV+RGY  SVFS +P+LLER G S+   G+IT + +
Sbjct: 253 LLLMDSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSSMPKLLERAGNSQS--GSITGLYT 310

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+  +P+ D+ R ILDGHIVL+R+LA   +YP +D LASVSR+     +++ KK+
Sbjct: 311 VLVDGDDLTEPVTDTARGILDGHIVLSRALANRNQYPAIDVLASVSRVMSDIVTSEHKKI 370

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            + +  ++    +  D+  IG Y  G +  +D A+  +  I +F++Q   D  S D   E
Sbjct: 371 ANQMKKVMAIHRDAEDLINIGAYVKGSNEKIDYAIAHIDKILEFIEQGTHDNYSFDEVVE 430

Query: 433 IT 434
           + 
Sbjct: 431 LL 432


>gi|302341727|ref|YP_003806256.1| ATP synthase F1, subunit alpha [Desulfarculus baarsii DSM 2075]
 gi|301638340|gb|ADK83662.1| ATP synthase F1, alpha subunit [Desulfarculus baarsii DSM 2075]
          Length = 504

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 104/435 (23%), Positives = 179/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQ----LAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q      +DY K + V + G + S+      +  + +    G+ +   G  
Sbjct: 1   MQIKAEEISQVIREQIKDYDKKVEVAETGTVLSVGDGIARIHGVEK-AMAGELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              LG V+ +  D V +  +G  E I  GD V   GR   +       GRVI+ +G P+D
Sbjct: 59  --ILGMVLNLEEDNVGVTIMGDCEHIKEGDTVKRTGRIAEVPVGEAVIGRVIDPVGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I    P  + R+ V +   TG++ ID  TP+  GQR  V     IGK
Sbjct: 117 GKGPINAKEARR-IEMIAPGVVQRKSVHEPMYTGLKAIDAMTPVGRGQRELVIGDRQIGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATS-DESPILR 231
           + +L     +        I   VG++   V + ++        +   VV+    +   L+
Sbjct: 176 TAVLVDAIINQKGQDVYCIYVAVGQKKSTVAQVVDTLTRHGAMEYTCVVSACASDPATLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I EYF     + L+  D +++ A + R+I+      P    +P  +F    
Sbjct: 236 YIAPYSGCAIGEYFRDSARHALICYDDLSKQAVAYRQISLLLRRPPGREAFPGDIFYNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDELGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIYLEPRLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E         +   +D      +++
Sbjct: 356 AINVGLSVSRVGGAAQCKAMKQVAGTLRLDLAQYRELE---AFAQFGSDLDKATQAQLNR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GMRLVEILKQPQYQP 427


>gi|158320515|ref|YP_001513022.1| flagellar protein export ATPase FliI [Alkaliphilus oremlandii
           OhILAs]
 gi|158140714|gb|ABW19026.1| flagellar protein export ATPase FliI [Alkaliphilus oremlandii
           OhILAs]
          Length = 437

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 169/435 (38%), Positives = 253/435 (58%), Gaps = 11/435 (2%)

Query: 7   TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVI 63
           +L +  E  SK +L+   GY+S +     T+  +   V LG+             L +V+
Sbjct: 5   SLKKYEEALSKLDLIKYTGYVSQVIG--LTIESVGPAVKLGEMCKIYSLKGTEPILSEVV 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                 V + P+G  E I  G  V   G   ++S      GRV++ LG PID    L   
Sbjct: 63  GFKEKKVLLMPLGEMEGIGPGSKVEALGITMQVSVGEELLGRVLDGLGNPIDDK-ELLNT 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           + +  +M+  P  + R ++ +    G++ +D      +GQRIG+FAGSG+GKSTLL M A
Sbjct: 122 NKTYPVMAAPPNPLKRTKINEPLALGVKTLDGLLTCGNGQRIGIFAGSGVGKSTLLGMIA 181

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +I+L+GERGREVREFI  D   + LK+SVV+VATSD+  ++RK   L A  +
Sbjct: 182 RNTQADINVIALIGERGREVREFIENDLQEEGLKRSVVIVATSDQPALIRKKGALLATAV 241

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G NV+L++DS+TRF+ + RE+    GE PV+RGY  SVF+ELP+LLER G S+
Sbjct: 242 AEYFRDQGKNVILMMDSLTRFSMAQREVGLAVGEPPVSRGYTPSVFAELPKLLERSGTSD 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+IT + +VLVDGD+ N+PIAD+VR ILDGHIVL+R +A    YP +D LASVSR+ 
Sbjct: 302 K--GSITGLYTVLVDGDDMNEPIADTVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVM 359

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     + + +  L+  +  + D+  IG Y  G +  +D++++++  I  FL+Q  
Sbjct: 360 PNIVEKKHLLIANEIKELLSTYNSSEDLINIGAYIKGTNRRIDESINKIDSINSFLRQDV 419

Query: 422 SDLSS-EDVFQEITK 435
            D ++ ED    + +
Sbjct: 420 HDKTTLEDAITMMEE 434


>gi|304437793|ref|ZP_07397743.1| ATP synthase F1 sector alpha subunit [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369241|gb|EFM22916.1| ATP synthase F1 sector alpha subunit [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 505

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 103/437 (23%), Positives = 184/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + ++  KN      V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMNPEEITSIIKERIKNYDVDLNVNDVGTVLEVGDGIAHIYGLDK-AMAGELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           +D  G V+ +  + V    +G    I  GD V   GR   +       GRV++ALG+PID
Sbjct: 57  NDVYGLVLNLEQESVGAVLLGGETLIKEGDTVKRTGRIMQVPVGEAMVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P   +R+ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIDTKEFR-PVESPAPGIADRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +      I     +G++   V   ++    G  +  +++V AT+ +S  L+
Sbjct: 176 TAIAVDTILNQKGQNCICVYVAIGQKASTVARVVKTLEDGGAMDYTIIVAATAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  KG + L + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEYFMYKGGHALCVYDDLSKHAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G+ITA+  +     + +  I  +V SI DG I+L+      G  P
Sbjct: 296 RLLERAAKLSDALGAGSITALPIIETLAGDLSAYIPTNVISITDGQIMLDTDSFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AISVGLSVSRVGGSAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ+     S
Sbjct: 413 GARMVETLKQAQYSPLS 429


>gi|152990966|ref|YP_001356688.1| F0F1 ATP synthase subunit alpha [Nitratiruptor sp. SB155-2]
 gi|166201670|sp|A6Q4C2|ATPA_NITSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151422827|dbj|BAF70331.1| F0F1-type ATP synthase, alpha subunit [Nitratiruptor sp. SB155-2]
          Length = 505

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/430 (25%), Positives = 181/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ED+   + V + G + S       V  L+  V  G+ +     +    G  + 
Sbjct: 12  SIIKERIEDFELKIDVEETGKVISFGDGVAKVFGLN-NVMAGEMLEFDNGDK---GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G GE I  G  V   G+  +        GRVINA+G+PIDG   +   +
Sbjct: 68  LEETNVGVVVLGRGEGIREGSSVKRLGQLLKAPVGEALVGRVINAIGEPIDGKGPIEATE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 YRY-VEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   VG++   V + ++          ++VV A + E   L+ +AP T VT
Sbjct: 187 NQKGQDVVCIYVAVGQKQSTVAQVVKKLEEHGAMDYTIVVNAGASEPAALQFLAPYTGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G + L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 IGEYFRDNGKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDKLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNAGIRPAINVGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E         +   +D    K + +   + + LK
Sbjct: 367 RVGGAAQIKAMKQVAGTLRLDLAQYRELE---AFAQFASDLDEASRKQLERGMRMVEILK 423

Query: 419 QSPSDLSSED 428
           Q P      +
Sbjct: 424 QPPYSPLPVE 433


>gi|313899136|ref|ZP_07832661.1| ATP synthase F1, alpha subunit [Clostridium sp. HGF2]
 gi|312956076|gb|EFR37719.1| ATP synthase F1, alpha subunit [Clostridium sp. HGF2]
          Length = 506

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 110/435 (25%), Positives = 187/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAED----YSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +++L +D    Y ++L + + G I ++      +  L Q    G+ +   G  
Sbjct: 1   MSLKPEEISKLIKDQIRRYDEDLEIDETGTIITVGDGIALIYGL-QNAMAGELLRFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  + V    +G    I  GD V   GR   +       GRV+NALG+ ID
Sbjct: 58  -DIYGMVLNLEEEHVGAVLMGDDSNIREGDEVKRTGRIVEVPVGDGMLGRVVNALGQAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G + + K D    +    P  M R+ V +  +TG+++ID   P+  GQR  +      GK
Sbjct: 117 GGEPI-KSDKFRPVERVAPGVMTRKSVHQPIQTGLKIIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + +   K I   +G++   V + +E          + +V +T+ E   L+
Sbjct: 176 TAIAIDTIINQKNNNVKCIYVAIGQKASTVAQIVEKLRSHGAMEYTTIVSSTASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +   GD+VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMENGDDVLIVYDDLSKHAVAYRTMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDELGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K++  SL   + +F E +       +   +D    + +  
Sbjct: 356 AVDSGLSVSRVGSAAQIKAMKQVSGSLKLELAQFREMQ---AFAKFGSDLDAATTETLAH 412

Query: 410 VPIIYDFLKQSPSDL 424
              +   L Q+  D 
Sbjct: 413 GERLTKLLIQNQYDP 427


>gi|51894136|ref|YP_076827.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM
           14863]
 gi|51857825|dbj|BAD41983.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM
           14863]
          Length = 436

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 161/422 (38%), Positives = 238/422 (56%), Gaps = 9/422 (2%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           L+   G ++    +   +        + +    QG       +V+    D + + P+G  
Sbjct: 15  LLPVVGRVTGAAGLI--IESAGPRAKMNELCWLQGDGRRVPAEVVGFREDRLLLMPLGET 72

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G D++   G  +        GRVI+ LG PID    L        I+   P  + 
Sbjct: 73  DGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLGNPIDDKGPLMGCGFR-PILGPAPDPLA 131

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           RQR+ +    G+R +D    +  GQRIG+FAGSG+GKSTLL M AR+   D  +I+LVGE
Sbjct: 132 RQRIHRPLSLGVRALDALITVGMGQRIGIFAGSGVGKSTLLGMVARATAADCNVIALVGE 191

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           RGREVREFI +D   + L++SVVVVATS++  ++R  A L A  IAEYF      +V+L+
Sbjct: 192 RGREVREFIEKDLGEEGLRRSVVVVATSEQPSLVRIRAALMATAIAEYFRDAHGLDVILM 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR AH+ RE+    GE P  RGY  SVF+ LPR+LER G      G++T V +VLV
Sbjct: 252 MDSVTRLAHAQREVGLAVGEPPATRGYTPSVFAMLPRVLERSG--TGPAGSVTGVYTVLV 309

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+P+AD+VRSILDGH+VL+R LA  G YP +DPL SVSR+     + + +K    
Sbjct: 310 DGDDMNEPVADAVRSILDGHVVLSRKLANAGHYPAIDPLQSVSRVMPDVTTPEHRKQAQR 369

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434
           L  L+  ++E  D+  IG Y+ G + ++D+A+ ++  I  FL Q     S+ E+  + + 
Sbjct: 370 LRALLSAYQEAEDLIQIGAYQQGTNPLVDEALAKMDQIKRFLIQPADQPSTMEEALRGLA 429

Query: 435 KK 436
             
Sbjct: 430 AL 431


>gi|238927817|ref|ZP_04659577.1| ATP synthase f1, alpha subunit [Selenomonas flueggei ATCC 43531]
 gi|238884364|gb|EEQ48002.1| ATP synthase f1, alpha subunit [Selenomonas flueggei ATCC 43531]
          Length = 505

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 103/437 (23%), Positives = 184/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + ++  KN      V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMNPEEITSIIKERIKNYDVDLNVNDVGTVLEVGDGIAHIYGLDK-AMAGELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           +D  G V+ +  + V    +G    I  GD V   GR   +       GRV++ALG+PID
Sbjct: 57  NDVYGLVLNLEQESVGAVLLGGETLIKEGDTVKRTGRIMQVPVGEAMVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P   +R+ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIDTKEFR-PVESPAPGIADRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +      I     +G++   V   ++    G  +  +++V AT+ +S  L+
Sbjct: 176 TAIAVDTILNQKGQNCICVYVAIGQKASTVARVVKTLEDGGAMDYTIIVAATAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  KG + L + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEYFMYKGGHALCVYDDLSKHAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G+ITA+  +     + +  I  +V SI DG I+L+      G  P
Sbjct: 296 RLLERAAKLSDALGAGSITALPIIETLAGDLSAYIPTNVISITDGQIMLDTDSFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AISVGLSVSRVGGSAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ+     S
Sbjct: 413 GARMVETLKQAQYSPLS 429


>gi|92118831|ref|YP_578560.1| flagellum-specific ATP synthase [Nitrobacter hamburgensis X14]
 gi|91801725|gb|ABE64100.1| ATPase FliI/YscN [Nitrobacter hamburgensis X14]
          Length = 454

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 167/438 (38%), Positives = 267/438 (60%), Gaps = 6/438 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           ++ LA+   D  +  V   G +  +  +   +      + +G  ++ +      +  +V+
Sbjct: 13  VKGLAEQVGDIER--VNIYGRVVGVRGLMVEIAGPIHAMSVGARILIETGGDRVIPAEVV 70

Query: 64  RINLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             N D   + P    + +  G   V      ++ P+  W GRV+NA+G+PIDG  +L +G
Sbjct: 71  GFNGDNAVVMPFAGLDGVRRGCRAVIANASSQVRPAPSWLGRVLNAMGEPIDGKGALPQG 130

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            + +   +  PPA +R+RV K    G+R ++ F   C GQR+G+FAGSG+GKS LLSM A
Sbjct: 131 PVPVPFRNSPPPAHSRKRVGKPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLA 190

Query: 183 RSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +I LVGERGREV+EF++D    + L +SVVVVATSDE  ++R+ A    + +
Sbjct: 191 RNADADISVIGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAV 250

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +V+ ++DS+TRFA + REI  ++GE P  +GY  +VF+ELPRLLER GP  
Sbjct: 251 AEYFRDEGKDVMCMMDSVTRFAMAQREIGLSTGEPPTTKGYTPTVFTELPRLLERAGPGA 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR  
Sbjct: 311 ADKGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRAIAERGRYPAINVLKSVSRTM 370

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K+       +++    ++  F +  ++  +G YR G +  +D+A+   P++ DFL+Q+ 
Sbjct: 371 PKSADPAFLPVITRGRQVMATFSDMEELIRLGAYRTGSNAEVDEAIRLNPLLEDFLRQAK 430

Query: 422 SDLSS-EDVFQEITKKLQ 438
            +++S ED ++ + + L+
Sbjct: 431 DEVTSIEDGYRRLQQILK 448


>gi|225848287|ref|YP_002728450.1| F0F1 ATP synthase subunit alpha [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644548|gb|ACN99598.1| ATP synthase F1, alpha subunit [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 504

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 100/431 (23%), Positives = 179/431 (41%), Gaps = 14/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE L +  +++  +  ++  G +  +      +  L +   +G+ +  +      +G V 
Sbjct: 10  LEQLNKQIQEFEVSANLEEIGTVIQVGDGVARIYGLEK-AMMGEMLEFENG---VVGVVF 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V    +G    +  G +V   G+   I       GRV++ LG PIDG   +   
Sbjct: 66  NLEEDNVGAVLLGSDVNVREGSVVKRTGKILSIPVGKGLLGRVVDGLGNPIDGKGPITDI 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
                +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++
Sbjct: 126 AYYSPVEKIAPGVVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTIAIDTI 185

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
             +       I   +G++   V   +E          + VV AT+ +   ++ +AP    
Sbjct: 186 LNQKGQGVYCIYVAIGQKRANVVHIVETLQKHGAMEYTTVVAATASDPATMQYIAPFVGC 245

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TI EYF   G + L+I D +T+ A++ R+++      P    YP  VF    RLLER   
Sbjct: 246 TIGEYFRDNGMHALVIYDDLTKHAYAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAK 305

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++   SV
Sbjct: 306 LNDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLEADLFYKGIRPAINVGISV 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + +F E         +   +D      + +   + + L
Sbjct: 366 SRVGGAAQIKAMKQVAGTLRLDLAQFRELE---AFVQFASDLDKATQAQIARGQRMVELL 422

Query: 418 KQSPSDLSSED 428
           KQ P+     +
Sbjct: 423 KQPPNQPVPVE 433


>gi|219670789|ref|YP_002461224.1| F0F1 ATP synthase subunit alpha [Desulfitobacterium hafniense
           DCB-2]
 gi|254807693|sp|B8FZ36|ATPA_DESHD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219541049|gb|ACL22788.1| ATP synthase F1, alpha subunit [Desulfitobacterium hafniense DCB-2]
          Length = 502

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 175/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   + VV  G +  +      V  L + +  G+ +   G      G  + 
Sbjct: 10  SIIKQQIERYDSAVEVVDVGTVIQVGDGIARVHGLEKAMS-GELLEFPGG---IYGMAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D +    +G   EI  GD V   GR   +       GRV+NALG+PIDG   + K D
Sbjct: 66  LEEDNIGCIILGKFTEIREGDQVKRTGRIVEVPVGEAMIGRVVNALGQPIDGKGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I +  P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRPIENIAPGVVYRKSVHEPLQTGLKSIDAIVPIGRGQRELIIGDRQTGKTAVAVDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   VG++   V   ++          S+VV AT+ E   +  +AP +   
Sbjct: 185 NQKGKDVICIYVAVGQKASTVAGVVKTLADHGAMDYSIVVSATASEPAPMLYIAPYSGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIYDDLTKQAAAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SPDLGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAGFRPAINVGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + ++ E         +   +D I    + +   + + LK
Sbjct: 365 RVGGSAQIKAMKQVAGQLRLDLAQYREL---AAFAQFGSDLDKITQMRLTRGERMMEILK 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QKQYEP 427


>gi|222053557|ref|YP_002535919.1| ATP synthase F1, alpha subunit [Geobacter sp. FRC-32]
 gi|254807698|sp|B9LZ86|ATPA_GEOSF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|221562846|gb|ACM18818.1| ATP synthase F1, alpha subunit [Geobacter sp. FRC-32]
          Length = 502

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 180/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     K       V + G I SI      +  L +    G+ +   G  
Sbjct: 1   MEIRAEEISEIIRKQIKEYGSEVEVAETGTIISIGDGIARIHGLDK-AMAGELLEFPGGI 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +  D V    +G   EI  GD V    R   +       GRV+NA+G+PID
Sbjct: 60  S---GMALNLEEDNVGAAILGEFSEIKEGDTVKRTNRIVEVPVGEALIGRVVNAIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D   ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TDKFGKVEVKAPGIVKRKSVHQPMQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +           +++V AT+ E   L+
Sbjct: 176 TAVAIDTIINQKGGDVVCIYVAIGQKRSTVAQVVSKLQEHGAMDYTIIVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T VT+ EYF   G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FISPYTGVTMGEYFRDNGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER        G  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKVSDACGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQVKAMKQVAGTLRLSLAQYRE---MAAFAQFGSDLDKATQMQLAR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GERLVEVLKQPQ 424


>gi|290490166|gb|ADD31490.1| ATP synthase CF1 alpha subunit protein [Antirrhinum majus]
          Length = 507

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 108/428 (25%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKQHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            +   + D
Sbjct: 425 QAAPLTVD 432


>gi|209963545|ref|YP_002296460.1| flagellum-specific ATP synthase [Rhodospirillum centenum SW]
 gi|209957011|gb|ACI97647.1| H+-transporting two-sector ATPase FliI [Rhodospirillum centenum SW]
          Length = 461

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 177/418 (42%), Positives = 258/418 (61%), Gaps = 4/418 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G +SS + +   V  L + + +GD      ++   L  +VI  ++    + P G  + + 
Sbjct: 21  GKVSSCSGMTVEVEGLERRLAVGDACRVFARDGRALACEVIGFSVGRAVLMPFGPLDGLG 80

Query: 83  LGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           LG  V   G      P+  W GRV++  G+P+DG   L +GD +  + +  P A  R+R+
Sbjct: 81  LGCRVETGGEPASFRPALSWLGRVVDGFGRPVDGRGPLSRGDENRVLRAAPPHAYERRRI 140

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
               +TG+RV+D F PLC GQR+GVFAGSG+GKSTLL+M ARS   D  +I L+GERGRE
Sbjct: 141 GPRLETGLRVVDTFVPLCRGQRLGVFAGSGVGKSTLLAMLARSSAADVNVIGLIGERGRE 200

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V+EFI+D LG + L +SVVVVATSDE  ++R+ A    + +AEYF  +G +VL ++DS+T
Sbjct: 201 VQEFIQDDLGPEGLARSVVVVATSDEPALMRRQAAWLTLGLAEYFRDQGRDVLCMMDSVT 260

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI  ++GE P  +GYP +VF+ELPRLLER GP  +  G+IT + +VLV+G +H
Sbjct: 261 RFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAGPGREGTGDITGIFTVLVEGGDH 320

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           ++P+AD+VR ILDGH+VL RS+AE GRYP  D L SVSR      S +E   +     L+
Sbjct: 321 DEPVADAVRGILDGHLVLTRSIAERGRYPAADVLKSVSRALPGCHSEEENLTMGRARALL 380

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437
            R+E   ++  +G Y+ G D  LD A+     + +FL+Q  ++  +S D F  +   L
Sbjct: 381 ARYESMEELVRLGAYKAGSDPELDLAIKANEPLENFLRQGKTETTASADAFARLQGIL 438


>gi|86610100|ref|YP_478862.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|110832069|sp|Q2JIG0|ATPA_SYNJB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|86558642|gb|ABD03599.1| ATP synthase F1, alpha subunit [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 506

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y++ + V   G +  +      +  L + V   + +  +   +   G  + + 
Sbjct: 13  IKQQIEQYNQEMQVSNVGTVLQVGDGIARIYGLDK-VMASELLEFEDGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D +    +G G  I  G  V   G+   I       GRV++ L  P+DG   +   +  
Sbjct: 69  EDNIGAVLIGSGRNIQEGSTVKSTGKIASIPVGEALLGRVVDPLCNPLDGKGPIQCTESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+T+      + 
Sbjct: 129 L-IESPAPGIVDRRSVYEPLQTGITAIDALIPIGRGQRELIIGDRQTGKTTVAVDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   + + +           S+VV A +D    L+ +AP    TIA
Sbjct: 188 KGQDVICIYVAIGQKQSTIAQVVGILTERGAMDYSIVVAAGADSPAPLQWLAPYCGATIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G + L++ D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYQGKHTLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V    ++ +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQANDVSAYIPTNVISITDGQIFLESDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+  S+   + ++   RD+     +   +D    K + +   + + LKQ 
Sbjct: 368 GSAAQTKAMKKVAGSIKVELAQY---RDLEAFAQFASDLDEATQKQLARGQRLQELLKQP 424

Query: 421 PSDLSSED 428
                S D
Sbjct: 425 QYSPLSLD 432


>gi|325116744|emb|CBZ52297.1| hypothetical protein NCLIV_020840 [Neospora caninum Liverpool]
          Length = 568

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 185/440 (42%), Gaps = 28/440 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           + +   +++L E+       Q      G + S+      +  L + V  G+ V  Q   +
Sbjct: 56  KISPSEMSKLLEERISGWKAQTSTEEVGRVVSVGDGIARLFGL-EGVQAGELVEFQNGMT 114

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V +   G    +  GD V   GR    P      GRV++ALG PIDG
Sbjct: 115 ---GMALNLETDNVGVVIFGDDRSVLEGDSVKRTGRIVDVPIGPGLLGRVVDALGNPIDG 171

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +   +    +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK 
Sbjct: 172 KGPIPAKE-RRRVELKAPGIIPRKSVHEPMMTGLKCVDALVPVGRGQRELIIGDRQTGKT 230

Query: 175 ----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVAT 223
                 +++    +D  D        I   VG++   V + ++     D +K + VV AT
Sbjct: 231 AVAVDAIINQKEINDSTDDESKKLYCIYVAVGQKRSTVAQIVKALEQRDAMKYTTVVAAT 290

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP +   + E+F   G + ++I D +++ A + R+++      P    YP
Sbjct: 291 ASEAAPLQFLAPYSGCAMGEWFRDSGRHCVIIYDDLSKQATAYRQMSLLLRRPPGREAYP 350

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 351 GDVFYLHSRLLERAAKMGDKSGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 410

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  ++   + ++ E   +     +   +D 
Sbjct: 411 LFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDA 467

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              + + +   + + LKQ  
Sbjct: 468 STRQLLTRGTALTELLKQRQ 487


>gi|75702550|gb|ABA22226.1| ATP synthase F1 subcomplex alpha subunit [Anabaena variabilis ATCC
           29413]
          Length = 529

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L +    G+ +  +      +G    
Sbjct: 35  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEK-AMAGELLEFEDG---TVGIAQN 90

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G EI  G  V   GR  +I       GRV++ALG+ IDG   +   +
Sbjct: 91  LEEDNVGAVLMGEGREIQEGSTVTATGRIAQIGVGEALIGRVVDALGRAIDGKGDIKASE 150

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 151 SRL-IESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 209

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   ++          +VVV A + E   L+ +AP T  T
Sbjct: 210 NQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVAAGASEPATLQFLAPYTGAT 269

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 270 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 329

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 330 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAVNPGISVS 389

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 390 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKATQDQLARGQRLRELLK 446

Query: 419 QSPSDLSS 426
           QS +   S
Sbjct: 447 QSQNQPLS 454


>gi|295311717|ref|YP_003587453.1| ATP synthase CF1 subunit alpha [Oncidium Gower Ramsey]
 gi|254833094|gb|ACT83097.1| ATP synthase CF1 subunit alpha [Oncidium Gower Ramsey]
          Length = 507

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 110/434 (25%), Positives = 190/434 (43%), Gaps = 16/434 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ +  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELIEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIKEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEGGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSD-LSSEDVFQEI 433
            SD L+ ED    I
Sbjct: 425 QSDPLAVEDQIATI 438


>gi|303230051|ref|ZP_07316823.1| ATP synthase F1, alpha subunit [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303231257|ref|ZP_07317995.1| ATP synthase F1, alpha subunit [Veillonella atypica ACS-049-V-Sch6]
 gi|302514164|gb|EFL56168.1| ATP synthase F1, alpha subunit [Veillonella atypica ACS-049-V-Sch6]
 gi|302515261|gb|EFL57231.1| ATP synthase F1, alpha subunit [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 512

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 107/437 (24%), Positives = 179/437 (40%), Gaps = 19/437 (4%)

Query: 1   MQKNLETL----AQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E +     Q  +DY  +L V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMKPEEITAIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLER-AMAGELLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ + LD V    +G    I  GD V   G+   +       GRV+N LG+PID
Sbjct: 57  HGVYGLVLNLELDNVGAVLLGDDFLIKEGDEVRRTGKIMDVPVGDALIGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   +    +    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGAIQATE-RRPVEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   V   ++          ++VV A++     L+
Sbjct: 176 TAIALDTIINQKGKDVICIYVAIGQKESTVARVVQKLEETGALDYTIVVSASASTGAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V + EYF  KG +VL + D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGVAMGEYFMYKGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAAKLSPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AVDVGLSVSRVGGSAQTKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDAATKAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ   +  S
Sbjct: 413 GERLTEMLKQGQYEPMS 429


>gi|300867810|ref|ZP_07112452.1| ATP synthase subunit alpha [Oscillatoria sp. PCC 6506]
 gi|300334141|emb|CBN57624.1| ATP synthase subunit alpha [Oscillatoria sp. PCC 6506]
          Length = 505

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 100/424 (23%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      +  L + +  G+ +         +G  + 
Sbjct: 11  SIIRQQIEQYDQDVKVSNVGTVLQVGDGIARIYGLDKAMS-GELLEFADG---TVGLALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   GR  ++       GRV++AL +PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGQGLGIQEGSAVTATGRIAQVPVGEAMLGRVVDALARPIDGKGEIKCSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESPAPGIVSRRSVYEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAVDTII 185

Query: 184 SDC--FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +           ++VV A + +   L+ +AP T  +
Sbjct: 186 NQKSENVVCVYVAIGQKASTVANVVNTLQEKGAMDYTIVVAANASDPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 306 SNDLGEGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAVNPGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +++   D+     +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAMKKVAGKVKLELAQYD---DLAAFSQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           Q  +
Sbjct: 423 QPQN 426


>gi|114329731|ref|YP_740550.1| ATP synthase CF1 alpha subunit [Platanus occidentalis]
 gi|122166050|sp|Q09G61|ATPA_PLAOC RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|114054369|gb|ABI49763.1| ATP synthase CF1 alpha subunit [Platanus occidentalis]
          Length = 507

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|251799780|ref|YP_003014511.1| ATP synthase F1 subunit alpha [Paenibacillus sp. JDR-2]
 gi|247547406|gb|ACT04425.1| ATP synthase F1, alpha subunit [Paenibacillus sp. JDR-2]
          Length = 507

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y   + VV  G + ++      V  L +    G+ +         +G  + + 
Sbjct: 15  IKQQIEQYKSEIQVVDVGTVINVGDGIARVHGL-ENAMQGELLEFSNG---VVGMALNLE 70

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G   +I  GD V   GR   +       GRV+N LG+P+DG   +      
Sbjct: 71  ESNVGVVILGPYTDIREGDQVKRTGRIMEVPVGEELLGRVVNPLGQPLDGKGPINTTQFR 130

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I S  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      + 
Sbjct: 131 A-IESPAPGVIDRKSVHEPMQTGIKAIDAMVPVGRGQRELIIGDRQTGKTAIAIDAIINQ 189

Query: 186 CFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
             +  K I   VG++   V   +E          +++V A + E   L  +AP    ++ 
Sbjct: 190 KGNGVKCIYVAVGQKQSTVAGVVETLRKHGALDYTIIVTAGASEPAPLLFLAPYAGCSMG 249

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 250 EYFMYKGEHVLVIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 309

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L   L   G+ P V+   SVSR+
Sbjct: 310 ALGGGSLTALPFIETQASDVSAYIPTNVISITDGQIFLESDLFYSGQRPAVNVGISVSRV 369

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E +       +   +D      +++     + LKQ 
Sbjct: 370 GGSAQIKAMKKVAGTLRLDLAAYRELQ---AFSQFGSDLDKGTLARLNRGARTMEILKQG 426

Query: 421 PSDL 424
            +  
Sbjct: 427 VNQP 430


>gi|78043388|ref|YP_359843.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995503|gb|ABB14402.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 434

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 173/435 (39%), Positives = 257/435 (59%), Gaps = 10/435 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           NL  L +  +++    +   G +  +  +      L   V +G+ V     N+  L +V+
Sbjct: 5   NLGYLTEQIKEHE--FLKPWGVVRQVIGLTVEAHGL--KVSVGETVEILAGNARVLAEVV 60

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
               +   + P+G    ISLG LV    R  +I+      G+V++ LG+P++ D   G+ 
Sbjct: 61  GFKEENAILMPLGEINGISLGSLVRPLRRQLQITVGKSLLGKVLDGLGRPLNADKIYGRH 120

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  K P  ++R+R++K F TGI+ ID       GQR+G+FAGSG+GKSTLL M A
Sbjct: 121 ---FSLDRKPPKPLHRRRIKKPFATGIKAIDGPLTCGEGQRLGIFAGSGVGKSTLLGMIA 177

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R    D  +I+L+GERGREV +FIE+ LG+ +KKSV+VVATS++  + R      A  IA
Sbjct: 178 RYAEADVNVIALIGERGREVLDFIENDLGEGIKKSVLVVATSEQPALFRVKGAFVATAIA 237

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G  VLL++DS+TRFA + REI   +GE P +RGY  SVF+ LP+L+ER G  +K
Sbjct: 238 EYFREQGKKVLLMMDSLTRFAMAQREIGLAAGEPPSSRGYTPSVFALLPKLVERAGNDDK 297

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA  +VLV+GD+ N+PIAD+VR +LDGHIVL+R LA +G YP +D LAS SRL  
Sbjct: 298 --GSITAFYTVLVEGDDFNEPIADAVRGLLDGHIVLSRQLAGKGHYPAIDLLASNSRLMP 355

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +        L   +  ++  + +  D+ LIG Y+PG + +LD+A+  VP I  FL+Q  +
Sbjct: 356 ELVDEQHLALTLKMREILDIYRQNEDLILIGAYKPGTNPLLDRAIQLVPKINQFLQQKQN 415

Query: 423 DLSSEDVFQEITKKL 437
           +       +E+ K L
Sbjct: 416 EKVDFTTTKEMLKTL 430


>gi|224178027|ref|YP_002600941.1| CF1 alpha subunit of ATP synthase [Pyramimonas parkeae]
 gi|215882694|gb|ACJ71067.1| CF1 alpha subunit of ATP synthase [Pyramimonas parkeae]
          Length = 506

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 187/424 (44%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y+K + VV  G +  +      +  L + V  G+ V  Q      +G  + 
Sbjct: 11  SIIRQQIESYNKEVKVVNVGTVLQVGDGIARIYGLEK-VMAGELVEFQDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  GD V   G+  +I     + GRV++AL +PIDG  ++   D
Sbjct: 67  LESDNVGAVLMGSGLSIQEGDSVKATGKIAQIPVGEAFLGRVVDALARPIDGKGAI-TSD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 126 GSRLIESPAPGIISRRSVYEPLQTGLVAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   + VI     +G++   V + +           S++V + +D    L+ +AP T  +
Sbjct: 186 NQKGESVICVYVAIGQKASSVAQIVTTLEEKGAMEYSIIVASNADSPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  +G++TA+  V     + +  I  +V SI DG + L+  +   G  P ++   SVS
Sbjct: 306 SNELGEGSMTALPIVETQAGDVSAYIPTNVISITDGQVFLSADIFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDQATQNQLSRGVRLRELLK 422

Query: 419 QSPS 422
           Q+ S
Sbjct: 423 QAQS 426


>gi|238018580|ref|ZP_04599006.1| hypothetical protein VEIDISOL_00407 [Veillonella dispar ATCC 17748]
 gi|237865051|gb|EEP66341.1| hypothetical protein VEIDISOL_00407 [Veillonella dispar ATCC 17748]
          Length = 512

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 176/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  +DY  +L V   G +  +      +  L +    G+ +          G V+ 
Sbjct: 10  AIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLER-AMAGELLELP---HGVYGLVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           + LD V    +G    I  GD V   G+   +       GRV+N LG+PIDG  ++   +
Sbjct: 66  LELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPVGDALIGRVVNPLGQPIDGKGAIQATE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK+ +      
Sbjct: 126 -RRPVEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGKTAIALDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          ++VV A++     L+ +AP   V 
Sbjct: 185 NQKGKDVICIYVAIGQKESTVARVVQKLEETGALDYTIVVSASASTGAPLQYIAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL + D +T+ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMYKGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   +   G  P VD   SVS
Sbjct: 305 SPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRPAVDVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + ++ E   +     +   +D      + +   + + LK
Sbjct: 365 RVGGSAQTKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDAATKAQLDRGERLTEMLK 421

Query: 419 QSPSDLSS 426
           Q   +  S
Sbjct: 422 QGQYEPMS 429


>gi|319997184|gb|ADV91186.1| mitochondrial ATP synthase F1 alpha subunit-like protein 1
           [Karlodinium micrum]
          Length = 549

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 184/441 (41%), Gaps = 28/441 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           + +   L ++  D   N      V + G + S+      +  L + V  G+ V     +S
Sbjct: 35  KVSPAELTKILSDRIANFSDQQDVQEVGRVLSVGDGIARIYGL-KGVKAGEMVEF---SS 90

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V +   G    I  GD V   G     P      GRV++ALG PIDG
Sbjct: 91  GLKGMALNLETDNVGVVVFGDDRAIVEGDSVKCTGTIVDVPIGQELLGRVVDALGAPIDG 150

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +    +   +  K P  + RQ V +   TG++ +D   P+  GQR  +      GK 
Sbjct: 151 LGPINTA-VRRRVELKAPGIIPRQSVHEPMTTGLKAVDSLIPIGRGQRELIIGDRQTGKT 209

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATS 224
                 +L+  A +   +       I   +G++   V +  E     D LK + +V AT+
Sbjct: 210 AIAIDCMLNQKAVNAGPNEKEHLYCIYVAIGQKRSTVAQLFEILRKNDCLKYTTIVAATA 269

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            ++  L+ +AP T   +AEYF   G + ++  D +++ A + R+++      P    YP 
Sbjct: 270 SDAAPLQFLAPYTGCAMAEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPG 329

Query: 285 SVFSELPRLLERIGPSEK---EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
            VF    RLLER     +   + G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 330 DVFYLHSRLLERAAKMNEETHDGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 389

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A     K++  +L   + ++ E   +     +   +D 
Sbjct: 390 LFYRGIRPAVNVGLSVSRVGSAAQIKAMKQVAGTLKLELAQYRE---VAAFAQFGSDLDA 446

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + + +  I+ + LKQ   
Sbjct: 447 STQQQLLRGGILTELLKQKQF 467


>gi|78356034|ref|YP_387483.1| F0F1 ATP synthase subunit alpha [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|115312246|sp|Q313V8|ATPA_DESDG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78218439|gb|ABB37788.1| ATP synthase F1 subcomplex alpha subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 502

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 95/435 (21%), Positives = 181/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ E   +N        + G +  +      V  + +     + +   G  
Sbjct: 1   MQIKTEEISQIIESQIQNYEQRVEMSETGTVLYVGDGIARVYGV-RNAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G   +I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --LMGMVLNLEEDNVGVALLGPDTDIKEGDPVKRTGKIFSVPVGDAVMGRVLNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G+  +   +    +  K P  + R+ V +   TGI+ ID  TP+  GQR  V      GK
Sbjct: 117 GEGPVDSKEFR-PVELKAPGIIARKSVHEPMPTGIKAIDAMTPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ +         +G++   V    +          + ++ AT+ E   L+
Sbjct: 176 TAVCIDAILAQKNTDIHCFYVAIGQKRSTVALVADTLKKHGAMEYTTIISATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A      +AEY+   G + L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 FIAAYAGCAMAEYYRDSGKHALIVYDDLSKQATAYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVNDSLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E   +     +   +D      +++
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATQAKLNR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GARLVELLKQPQYQP 427


>gi|160881856|ref|YP_001560824.1| ATP synthase F1, alpha subunit [Clostridium phytofermentans ISDg]
 gi|189081294|sp|A9KK94|ATPA_CLOPH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160430522|gb|ABX44085.1| ATP synthase F1, alpha subunit [Clostridium phytofermentans ISDg]
          Length = 502

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 179/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  KN  +Q      G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQIKNYSMQLEVSDVGTVIQVADGIARIHGL-ENAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  D V    +G  + I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -DVYGMVLNLEEDNVGAVLLGDMKNINEGDTVKTTGRVVEVPVGDALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +     +I       + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETKKYRQIERVASGVIARKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDKQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++          + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQNVKCIYVAIGQKASTVANIVKTLEEYGALDYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I E +   G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAIGEEWMESGQDVLVIYDDLTKHAAAYRTLSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARLNDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETDMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+   +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AVNAGLSVSRVGGSAQIKAMKKIAGPIRIELAQYRE---LAAFAQFGSDLDADTKEKLAQ 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GERIREILKQPQ 424


>gi|163792318|ref|ZP_02186295.1| primosome assembly protein PriA [alpha proteobacterium BAL199]
 gi|159182023|gb|EDP66532.1| primosome assembly protein PriA [alpha proteobacterium BAL199]
          Length = 511

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 101/430 (23%), Positives = 172/430 (40%), Gaps = 24/430 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            Q+A   ++  V + G + S+      V  L Q V  G+ V   G      G  + +  D
Sbjct: 14  EQIANFGAEAEVAEVGQVLSVGDGIARVYGLDQ-VQAGEMVEFPGG---VRGMALNLETD 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GD V   G            GRV++ LG PIDG   L      M 
Sbjct: 70  NVGIVIFGDDRYIKEGDTVKRTGAIVDAPVGRGLLGRVVDGLGNPIDGKGPLQDVK-RMR 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+ +      +   
Sbjct: 129 VEVKAPGIMPRKSVHEPMQTGLKAIDSLIPIGRGQRELIIGDRQTGKTAIAIDAFINQKS 188

Query: 188 DK------------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                          I   +G++   V + ++        + S+V+ AT+ +   L+ +A
Sbjct: 189 VNDAAGDDDSKKLFCIYVAIGQKRSTVAQIVKTLEDYGALEYSIVIAATASDPAPLQFLA 248

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   + E+F   G + +++ D +++ A + R+++      P    YP  VF    RLL
Sbjct: 249 PYTGCAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 308

Query: 295 ERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER        G  ++TA+  +     + +  I  +V SI DG I L   L   G  P V+
Sbjct: 309 ERAAKMNDANGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETDLFYRGIRPAVN 368

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++   +   + ++ E   +     +   +D    + + +   
Sbjct: 369 VGLSVSRVGSAAQIKAMKQVAGRIKLELAQYRE---MAAFAQFASDLDASTQRLLARGSR 425

Query: 413 IYDFLKQSPS 422
           + + LKQ   
Sbjct: 426 LTELLKQPQF 435


>gi|164688906|ref|ZP_02212934.1| hypothetical protein CLOBAR_02554 [Clostridium bartlettii DSM
           16795]
 gi|164602110|gb|EDQ95575.1| hypothetical protein CLOBAR_02554 [Clostridium bartlettii DSM
           16795]
          Length = 500

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 182/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +   KN      +   G +  +     TV  L + V   + +   G  
Sbjct: 1   MNLRPEEISSIIKQQIKNYDNKIELTDTGSVLKVGDGIATVYGL-ENVMSSELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G  + +  D+V     G    I  GD+V   GR   +       GRV++ LG PID
Sbjct: 58  -EVFGMALNLEEDVVGAVLFGDDSGIKEGDIVKRTGRIVEVPVGEAMIGRVVSPLGLPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  + S  P  M R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TNKTRPVESPAPGIMARRSVYEPLQTGIKSIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           +++      +        I   +G++   V + +     G  +  ++VV AT+ ES  L+
Sbjct: 176 TSIAIDTILNQKGKDVICIYVAIGQKRSTVAQLVSRLENGGAMDYTIVVSATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGAAMGEEFMYNGKHVLIIYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIYLQPELFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VDP  SVSR+   A     KK+  +L     ++ E   +     +   +D    + + Q
Sbjct: 356 AVDPGISVSRVGGSAQIKSMKKVSGTLKLAYSQYRE---LASFSQFGSDLDADTKRRLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ  +
Sbjct: 413 GERIVEVLKQGEN 425


>gi|157961192|ref|YP_001501226.1| flagellum-specific ATP synthase [Shewanella pealeana ATCC 700345]
 gi|157846192|gb|ABV86691.1| flagellar protein export ATPase FliI [Shewanella pealeana ATCC
           700345]
          Length = 446

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 159/433 (36%), Positives = 241/433 (55%), Gaps = 5/433 (1%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            LAQ  +     LV   G +  +  +    T       +G     +    D + +VI  +
Sbjct: 11  KLAQHQQKVHPFLVEASGQLVRVVGLTLEATG--CRAAIGSLCAIETMAGDLIAEVIGFD 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
             ++Y+ P+     +  G  V   G    ++      GRV++  G PIDG  +L K D  
Sbjct: 69  DQLLYLMPIEELRGVLPGAKVTPLGEQSGLNVGLSLLGRVLDGSGLPIDGLGNL-KTDQK 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
               +     + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R  
Sbjct: 128 ASSHAPAINPLARRAISEPLDVGVRAINSMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGT 187

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  T+  IAEY
Sbjct: 188 TADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIAEY 247

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    ++
Sbjct: 248 FRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGGKQ 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A   
Sbjct: 308 GSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMV 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S +  + +  +  +   +++ +D+  IG Y  G D  +D A+   P +  FL+Q+  D 
Sbjct: 368 ISPEHLEAMRKVKQVYSLYQQNKDLISIGAYSQGSDPRIDNAIRLQPAMNAFLRQTMKDS 427

Query: 425 SSEDVFQEITKKL 437
            + D    +  +L
Sbjct: 428 VTFDSSTLMLSQL 440


>gi|145528251|ref|XP_001449925.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417514|emb|CAK82528.1| unnamed protein product [Paramecium tetraurelia]
          Length = 522

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 112/434 (25%), Positives = 189/434 (43%), Gaps = 32/434 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  ++ ++QL      N + + G + SI      V  L+Q V  G+ V     +S   G
Sbjct: 34  LEDKIKNISQL------NDIKEYGTVISIGDGIARVFGLTQ-VQAGEMVEF---SSGVRG 83

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V I  +G   EI  GD+V   G     P      GRV +ALG PIDG   +
Sbjct: 84  MALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGPV 143

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            K +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 144 -KTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAI 202

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPI 229
            T+++     D  DK      I   +G++   V   +        K ++VV AT+ E+  
Sbjct: 203 DTIINQKPNFDSGDKNKQLYCIYVAIGQKRSTVANLLGAM-----KYTIVVAATASEAAP 257

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +   I EYF   G + L+I D +++ A + R+++      P    YP  VF  
Sbjct: 258 LQYLAPYSGCAIGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 317

Query: 290 LPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER     +E   G++TA+  +     + +  I  +V SI DG I L   L  +G 
Sbjct: 318 HSRLLERAAKLNAENGNGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFKGI 377

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K +   L   + ++ E   +     +   +D    + +
Sbjct: 378 RPAINVGLSVSRVGSAAQIKAMKTVAGRLKLELAQYRE---VAAFAQFGSDLDAATQQLL 434

Query: 408 HQVPIIYDFLKQSP 421
           ++   + + LKQ  
Sbjct: 435 NRGAQLTELLKQKQ 448


>gi|313112901|ref|ZP_07798547.1| ATP synthase F1, alpha subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624806|gb|EFQ08115.1| ATP synthase F1, alpha subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 506

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 110/433 (25%), Positives = 183/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++     K+        + G +  +       + L +    G+ +      
Sbjct: 1   MQLKPEEISKIIRAQIKHYENAIEQSETGTVIMVGDGIARASGLEK-CMAGELLQFDNGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G    I  G  V   G+   +       GRV+NALG+PID
Sbjct: 60  ---YGMAQNLEENTVSIVLLGSDVGIKEGSTVKRTGKVVSVPVGEAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I S+ P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPIETTEFRA-IESRAPGIIDRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+ S    +        I   +G++   V   ++          ++VV AT+ E   L+
Sbjct: 176 TTIASDTIINQKGKDVICIYVAIGQKRSTVANLVQSLTESGAMGYTIVVSATASELSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFMHQGKHVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSNELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLIYSQYRELQSFAQFG---SDLDADTKARLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ+ S
Sbjct: 413 GERIVEVLKQNRS 425


>gi|307101720|ref|YP_003875497.1| ATPase subunit 1 [Silene latifolia]
 gi|296040811|gb|ADG85373.1| ATPase subunit 1 [Silene latifolia]
 gi|301338015|gb|ADK73307.1| ATPase subunit 1 [Silene latifolia]
          Length = 513

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 101/439 (23%), Positives = 177/439 (40%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + + LKQ  
Sbjct: 417 TQALLNRGARLTEVLKQQQ 435


>gi|160942707|ref|ZP_02089949.1| hypothetical protein FAEPRAM212_00183 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445981|gb|EDP22984.1| hypothetical protein FAEPRAM212_00183 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104093|emb|CBL01637.1| ATP synthase F1 subcomplex alpha subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 506

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 110/433 (25%), Positives = 183/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++     K+        + G +  +       + L +    G+ +      
Sbjct: 1   MQLKPEEISKIIRAQIKHYENAIEQSETGTVIMVGDGIARASGLEK-CMAGELLQFDNGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G    I  G +V   G+   +       GRV+NALG+PID
Sbjct: 60  ---YGMAQNLEENTVSIVLLGSDAGIKEGSIVKRTGKVVSVPVGDAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I S+ P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPIETTEYRA-IESRAPGIIERQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+ S    +        I   +G++   V   ++          ++VV AT+ E   L+
Sbjct: 176 TTIASDTIINQKGKDVICIYVAIGQKRSTVANLVQSLTEAGAMGYTIVVSATASELSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFMQQGKHVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSNELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLIYSQYRELQSFAQFG---SDLDADTKARLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ+ S
Sbjct: 413 GERIVEVLKQNRS 425


>gi|163850897|ref|YP_001638940.1| ATP synthase F1, alpha subunit [Methylobacterium extorquens PA1]
 gi|218529721|ref|YP_002420537.1| F0F1 ATP synthase subunit alpha [Methylobacterium chloromethanicum
           CM4]
 gi|240138028|ref|YP_002962500.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           AM1]
 gi|254560589|ref|YP_003067684.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           DM4]
 gi|226739908|sp|A9W2R3|ATPA_METEP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808104|sp|B7KUA4|ATPA_METC4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|163662502|gb|ABY29869.1| ATP synthase F1, alpha subunit [Methylobacterium extorquens PA1]
 gi|218522024|gb|ACK82609.1| ATP synthase F1, alpha subunit [Methylobacterium chloromethanicum
           CM4]
 gi|240007997|gb|ACS39223.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           AM1]
 gi|254267867|emb|CAX23733.1| ATP synthase F1 sector subunit alpha [Methylobacterium extorquens
           DM4]
          Length = 509

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 100/436 (22%), Positives = 183/436 (41%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + ++      V  L   V  G+ V  +   S   G
Sbjct: 12  LKEQIKNFGQEAE------VTEVGQVLAVGDGIARVYGL-DNVQAGEMVEFE---SGVRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G   EI  G  V   G    +       GRV++ LG PIDG   +
Sbjct: 62  MALNLEQDNVGVVIFGSDREIKEGQTVKRTGSIVDVPVGKGLLGRVVDGLGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK     
Sbjct: 122 QSTE-RRRVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELIIGDRQTGKTAIAL 180

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  +     D       +   +G++   V +F++        + S+V+ AT+ ++ 
Sbjct: 181 DTILNQKSAHAGADENAKLYCVYVAIGQKRSTVAQFVKVLEDQGALEYSIVIAATASDAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP     + EYF   G + +++ D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQFIAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER        GN   TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMGDAAGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D+   + 
Sbjct: 361 VRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLDVSTQRL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQ   
Sbjct: 418 LNRGARLTELLKQPQF 433


>gi|307244026|ref|ZP_07526145.1| ATP synthase F1, alpha subunit [Peptostreptococcus stomatis DSM
           17678]
 gi|306492550|gb|EFM64584.1| ATP synthase F1, alpha subunit [Peptostreptococcus stomatis DSM
           17678]
          Length = 500

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 189/439 (43%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +   KN      +   G + S+     +V  L + V  G+ +    K 
Sbjct: 1   MNLKPEEISSIIKSQIKNYDNKIKLTDTGSVLSVGDGIASVYGL-ESVMSGELLEFPNK- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  ++V    +G    I  GDLV   GR   +       GRV+NALG+PID
Sbjct: 59  --VFGMALNLEEEVVGAVILGDDSSIKEGDLVKRTGRIVEVPVGEAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D +  +    P  M+R+ V +  +TGI+ ID   P+  GQR  V      GK
Sbjct: 117 GRGDIL-TDKTRPVEYPAPGIMSRKSVFEPLQTGIKSIDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           +++L+    +        I   +G++   V + +  +     +  ++VV AT+ ES  L+
Sbjct: 176 TSILTDTIINQKGKDVICIYVAIGQKRSTVAQLVSTFEEFGAMDYTIVVSATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E F   G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGAAIGEEFMYNGKHVLIVYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     +    I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDDLGGGSMTALPVIETQAGDVAAYIPTNVISITDGQIYLQPELFYAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VDP  SVSR+   A     KK+  +L     ++ E   +     +   +D    + + Q
Sbjct: 356 AVDPGISVSRVGGSAQIKSMKKIAGTLKLAYSQYRE---LAAFSQFGSDLDEDTKRRLAQ 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I + LKQ   +  + +
Sbjct: 413 GQRIVEVLKQDEHNPITVE 431


>gi|11467516|ref|NP_043662.1| ATP synthase CF1 alpha subunit [Odontella sinensis]
 gi|231593|sp|Q00820|ATPA_ODOSI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|11944|emb|CAA43157.1| adenosinetriphosphatase [Odontella sinensis]
 gi|1185211|emb|CAA91694.1| ATP synthase CF1 subunit alpha [Odontella sinensis]
          Length = 503

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y +++ V   G +  +      V  L Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIREQIEQYDQDVKVDNIGTVLQVGDGIARVYGLDQ-VMSGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   G+  +I     + GRV+N LG PIDG   +   +
Sbjct: 67  LENDNVGVVLMGNGRQILEGSTVKTTGQIAQIPTGEAFLGRVVNPLGAPIDGKGDIANTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + +  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-LEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V + +           +++V A++++   L+ +AP     
Sbjct: 186 NQKTEDVVCVYVGVGQKASTVAQVVNVLEEKEAMAYTIIVCASANDPATLQYIAPYAGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYNGKATLVIYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPVIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDEATQKQLARGTRLREVLK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|115605007|ref|YP_784458.1| ATP synthase CF1 alpha subunit [Piper cenocladum]
 gi|122164377|sp|Q06GS5|ATPA_PIPCE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|112253736|gb|ABI14457.1| ATP synthase CF1 alpha subunit [Piper cenocladum]
          Length = 507

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V     +   +G  + + 
Sbjct: 13  IRERIEQYNREVNIVNTGTVLQVGDGIARIHGLDE-VMAGELVEF---DEGTIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER     S
Sbjct: 248 EYFMYREQHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNS 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|315639294|ref|ZP_07894456.1| ATP synthase F1 sector alpha subunit [Campylobacter upsaliensis
           JV21]
 gi|315480620|gb|EFU71262.1| ATP synthase F1 sector alpha subunit [Campylobacter upsaliensis
           JV21]
          Length = 501

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +   
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  GD V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVVLGKGEGLKEGDSVKRLKKLLKVPVGEALVGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGPINASEFRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +S  L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYTIVVNAGASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGVTMGEYFRDNSKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|28202156|ref|NP_777397.1| ATP synthase CF1 alpha subunit [Anthoceros formosae]
 gi|48474822|sp|Q85AU2|ATPA_ANTFO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|27807858|dbj|BAC55333.1| ATPase alpha subunit [Anthoceros formosae]
 gi|27807959|dbj|BAC55424.1| ATPase alpha subunit [Anthoceros formosae]
          Length = 507

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 187/422 (44%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + V+  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRKQIEQYNQEVKVINIGTVLQVGDGIARIYGLDK-VMAGELVEFEDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +  
Sbjct: 69  SDNVGVVLMGDGLSIQEGSSVEATGKIAQIPVSDAYLGRVVNALAQPIDGKGQIPAYEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +      + ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVNTFEERGALEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|292559496|ref|YP_003540916.1| ATP synthase CF1 alpha chain [Phoenix dactylifera]
 gi|290790904|gb|ADD63159.1| ATP synthase CF1 alpha chain [Phoenix dactylifera]
 gi|294620562|gb|ADF28132.1| ATP synthase CF1 alpha chain [Phoenix dactylifera]
          Length = 514

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 108/428 (25%), Positives = 188/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSNS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            SD  + +
Sbjct: 425 QSDPLTVE 432


>gi|152997448|ref|YP_001342283.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1]
 gi|150838372|gb|ABR72348.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1]
          Length = 443

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 168/442 (38%), Positives = 251/442 (56%), Gaps = 8/442 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDN 58
           M    E L +L    S +L  Q  G ++ +     T+  +   V LGD    Q  K+   
Sbjct: 1   MSTLEERLNKLNHVSSVSLPPQIEGKVTRMVG--LTMEAVGCVVALGDRCSVQVRKDRWV 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117
             +V+    D+ Y+ P    E IS G  V    G  ++       GRV+N LGKP+DG  
Sbjct: 59  ESEVVGFTGDLTYLMPTEAIEGISPGARVRPLLGDSKMPVGDELLGRVVNGLGKPLDGKG 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D S+ +   V   + R+ + +    GI+ I+    +  GQR+G+FAGSG+GKS L
Sbjct: 119 PIKTKD-SVTLHGNVINPLQRKPISEPLDVGIKAINSLLTVGKGQRLGLFAGSGVGKSML 177

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M  +    D  ++ L+GERGREV+EFI +    + L +SVVV + +D+S ++R  A +
Sbjct: 178 LGMMTKFTEADITVVGLIGERGREVKEFIDQILGEEGLSRSVVVASPADDSALMRLRAAM 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAEY+  +G NVLL++DS+TR+A + REIA + GE P  +GYP SVFS+LP+L+ER
Sbjct: 238 LATRIAEYYRDQGKNVLLLMDSLTRYAQAQREIALSVGEPPATKGYPPSVFSKLPQLVER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G++TA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LAEEG YP +D  AS
Sbjct: 298 AGNGCEGSGSVTAFYTVLTEGDDQQDPIADASRAILDGHIVLSRRLAEEGHYPAIDIEAS 357

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR      S D       +  L  +F++ +D+  +G Y  G D  LD+A+ Q+P I +F
Sbjct: 358 ISRAMPHIVSEDHLYGAMRVKQLYSKFQQNQDLISVGAYARGSDPDLDQAIIQMPEIRNF 417

Query: 417 LKQSPSDLSSED-VFQEITKKL 437
           L+QS ++  + D   Q +   +
Sbjct: 418 LQQSLTESFTIDQSLQALVTAM 439


>gi|257438172|ref|ZP_05613927.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
 gi|257199371|gb|EEU97655.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
          Length = 506

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 110/433 (25%), Positives = 182/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++     K+        + G +  +       + L +    G+ +      
Sbjct: 1   MQLKPEEISKIIRAQIKHYENVIEQSEVGTVIMVGDGIARASGLEK-CMAGELLQFDNGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G    I  G  V   G+   +       GRV+NALG+PID
Sbjct: 60  ---YGMAQNLEENTVSIVLLGSDVGIKEGSTVKRTGKVVSVPVGEAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I S  P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPIETTEFRA-IESPAPGIIDRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+ S    +        I   +G++   V   ++          ++VV AT+ E   L+
Sbjct: 176 TTIASDTIINQKGKDVICIYVAIGQKRSTVANLVQSLTEAGAMSYTIVVSATASELSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFMHQGKHVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSNELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLIYSQYRELQSFAQFG---SDLDADTKARLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ+ S
Sbjct: 413 GERIVEVLKQNRS 425


>gi|320148078|emb|CBJ20740.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
          Length = 506

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 177/439 (40%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   VG++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQLNSKATSESETLYCVYVAVGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + + LKQ  
Sbjct: 417 TQALLNRGARLTEVLKQPQ 435


>gi|156598245|gb|ABU85386.1| ATP synthase CF1 alpha subunit [Elaeis oleifera]
          Length = 507

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 108/428 (25%), Positives = 188/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAQTADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSNS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            SD  + +
Sbjct: 425 QSDPLTVE 432


>gi|307942822|ref|ZP_07658167.1| ATP synthase F1, alpha subunit [Roseibium sp. TrichSKD4]
 gi|307773618|gb|EFO32834.1| ATP synthase F1, alpha subunit [Roseibium sp. TrichSKD4]
          Length = 509

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V   G    +       GRV++ LG P+D
Sbjct: 59  --IRGMALNLEEDNVGVVIFGSDRDIKEGDTVKRTGAIVEVPVGKGLLGRVVDPLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++   +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIKDAEMRR-VDVKAPGILPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T L+        D       I   VG++   V +F++    +     S+V+ AT
Sbjct: 176 TAIILDTFLNQKPLHASNDEGNKLYCIYVAVGQKRSTVAQFVKVLEDNGALDYSIVIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++  L+ +AP +   + E+F   G + ++  D +++ A + R+++      P    +P
Sbjct: 236 ASDAAPLQYLAPFSGCAMGEFFRDNGMHAVIGYDDLSKQAVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++ G  ++TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERSAKLNEDHGAGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGPVKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              K +++   + + LKQ   
Sbjct: 413 TTQKLLNRGARLTELLKQPQF 433


>gi|114328722|ref|YP_745879.1| F0F1 ATP synthase subunit alpha [Granulibacter bethesdensis
           CGDNIH1]
 gi|122326326|sp|Q0BQE6|ATPA_GRABC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114316896|gb|ABI62956.1| ATP synthase alpha chain [Granulibacter bethesdensis CGDNIH1]
          Length = 511

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 173/428 (40%), Gaps = 21/428 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+A   S+  V + G + S+      V  L Q V  G+ V          G  + +  D
Sbjct: 14  SQIASFDSEANVAETGQVLSVGDGIARVYGL-QNVMAGELVEFPSAG--LKGMALNLEND 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G   +I  GD V        +       GRV++ALG PIDG   L        
Sbjct: 71  NVGVVIFGDDRQIREGDTVARTREIVDVPVGRGLLGRVVDALGNPIDGKGPLTDV-TRTR 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R+ V +  +TG++ +D   P+  GQR  V      GK      T ++   
Sbjct: 130 VEVKAPGIIPRKSVHEPMQTGLKSVDALIPIGRGQRELVIGDRQTGKTTVILDTFINQKP 189

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            +   D       I   VG++   V + +           S+VV AT+ +   ++ +AP 
Sbjct: 190 INQGTDESKKLYCIYVAVGQKRSTVAQIVRTLEEQGAMEYSIVVAATASDPAPMQFLAPY 249

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   + E+F     + ++  D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 250 TGCAMGEFFRDNAMHAVIAYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 309

Query: 297 IGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                   G  ++TA+  +     + +  I  +V SI DG I L   L  +G  P V+  
Sbjct: 310 AAKMNDAHGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFKGIRPAVNVG 369

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  S+   + ++ E   +     +   +D    K + +   + 
Sbjct: 370 LSVSRVGSSAQIKAMKQVAGSIKLELAQYRE---MAAFAQFASDLDASTQKLLARGARLT 426

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 427 ELLKQPQF 434


>gi|90418837|ref|ZP_01226748.1| ATP synthase F1, alpha subunit [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336917|gb|EAS50622.1| ATP synthase F1, alpha subunit [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 509

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 177/441 (40%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L      G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKNFGSEAEVSEVGQVLSVGDGIARVYGL-DNCQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --IQGMALNLEADNVGVVIFGSDRAIKEGDTVKRTGNIVEVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G  +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIGSTE-RRRVDVKAPGIIPRKSVHEPMSTGLKSIDALIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL----------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + ++              R       I   VG++   V +F+           SVV+ AT
Sbjct: 176 TAIILDTFLNQKPAHDEDREADKLYCIYVAVGQKRSTVAQFVRTLEERGAMEYSVVIAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T   I E+F     + ++  D +++ A S R+++      P    YP
Sbjct: 236 ASDPAPMQYIAPFTGCAIGEFFRDNAMHAVIAYDDLSKQAVSYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +     + +  I  +V SI DG I L  +
Sbjct: 296 GDVFYLHSRLLERAAKLNDELGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETT 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGVRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGARLTELLKQPQF 433


>gi|162279935|ref|NP_064105.2| ATPase subunit 1 [Beta vulgaris subsp. vulgaris]
 gi|323435129|ref|YP_004222347.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
 gi|3410894|dbj|BAA32243.1| F1 ATPase subunit alpha [Beta vulgaris subsp. vulgaris]
 gi|148491439|dbj|BAA99499.2| ATPase subunit 1 [Beta vulgaris subsp. vulgaris]
 gi|317905683|emb|CBJ14077.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
 gi|319439862|emb|CBJ17567.1| ATPase subunit 1 [Beta vulgaris subsp. maritima]
          Length = 506

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 177/439 (40%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   VG++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQLNSKATSESETLYCVYVAVGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + + LKQ  
Sbjct: 417 TQALLNRGARLTEVLKQPQ 435


>gi|149193993|ref|ZP_01871091.1| F0F1 ATP synthase subunit alpha [Caminibacter mediatlanticus TB-2]
 gi|149135946|gb|EDM24424.1| F0F1 ATP synthase subunit alpha [Caminibacter mediatlanticus TB-2]
          Length = 501

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 107/436 (24%), Positives = 186/436 (42%), Gaps = 19/436 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
            ++ + Q+ ++  +N      V + G +         V  L++ V  G+ V  +      
Sbjct: 1   MVQEITQIIKERIENFELKVDVEEVGKVIYSADGIAKVYGLTK-VMAGEMVEFETGEK-- 57

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
            G V  +  D V +  +G G +I  G  V   GR   +       GRV+NALG+PIDG  
Sbjct: 58  -GLVFNLETDNVGVVVLGKGTDIVEGSTVKRLGRLISVPVGEALIGRVVNALGEPIDGKG 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +    +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+
Sbjct: 117 EIEATEYRY-VEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTV 175

Query: 178 LSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
                 +        I   +G++   V   +           ++VV A++ E+  L+ +A
Sbjct: 176 AIDTILNQKGQDVICIYVAIGQKQSTVANIVRILEEHGAMDYTIVVNASASEAASLKFLA 235

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P + VT+ EYF   G + L++ D +++ A + RE++      P    YP  VF    RLL
Sbjct: 236 PYSGVTMGEYFRDNGRHALIVYDDLSKHADAYREMSLLLRRPPGREAYPGDVFYLHSRLL 295

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +   G++TA+  +   G +    I  +V SI DG I L  +L  +G  P ++
Sbjct: 296 ERAAKLNDKLGAGSLTALPIIETKGGDVAAYIPTNVISITDGQIFLETNLFNKGIRPAIN 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  +L   + ++ E         +   +D    K + +   
Sbjct: 356 VGLSVSRVGGAAQIKAMKQVAGTLRLELAQYRELE---AFAQFASDLDEASRKQLERGQR 412

Query: 413 IYDFLKQSPSDLSSED 428
           + + LKQ        +
Sbjct: 413 LVEILKQPAHQPLPVE 428


>gi|42525220|ref|NP_970600.1| F0F1 ATP synthase subunit alpha [Bdellovibrio bacteriovorus HD100]
 gi|81697715|sp|Q6MGM5|ATPA_BDEBA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|39577431|emb|CAE81254.1| ATP synthase F1, alpha subunit [Bdellovibrio bacteriovorus HD100]
          Length = 507

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 101/422 (23%), Positives = 175/422 (41%), Gaps = 15/422 (3%)

Query: 7   TLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            L +    Y+K + V + G + S+      +  L +    G+ V   G   +  G V+ +
Sbjct: 13  VLKEQINQYNKKIEVSETGSVLSVGDGVARIYGL-ENAMAGELVEFPG---EVFGMVLNL 68

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V     G    I  GD+V    +   +       GRV++ALG PIDG  ++     
Sbjct: 69  EEGYVGAVLFGEDRHIKEGDVVKRTKKIVSVPVGEALLGRVVDALGNPIDGRGAIN-TPH 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           S  + +K P  + R  VE+  +TGI+ ID   P+  GQR  +      GK+T+      +
Sbjct: 128 SRIVETKAPGIVYRHPVEEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAVDTIIN 187

Query: 185 DCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
                 +     +G++   V   +E        + + V+ A + +   L+ +A  +   +
Sbjct: 188 QKGLNVQCFYVAIGQKQSTVALVVEKLRAAGALEYTTVIAANASDPAPLQYLAAYSGTAM 247

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF   G + L++ D +T+ A + R+++      P    YP  VF    RLLER     
Sbjct: 248 AEYFRDTGRHALIVYDDLTKQAQAYRQLSLLLRRPPGREAYPGDVFYCHSRLLERASKLS 307

Query: 302 --KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             K  G++TA+  +     + +  I  +V SI DG I L   L  +G  P +    SVSR
Sbjct: 308 ADKGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLESDLFYKGVRPAISVGKSVSR 367

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  SL   + +F           +   +D    + + +   + + LKQ
Sbjct: 368 VGGAAQIKAMKQVAGSLKLELAQFRSME---AFAAFASDLDKASQQQLARGRRLIEVLKQ 424

Query: 420 SP 421
             
Sbjct: 425 PQ 426


>gi|78103238|ref|YP_358561.1| ATP synthase CF1 alpha subunit [Phalaenopsis aphrodite subsp.
           formosana]
 gi|110832065|sp|Q3BAQ7|ATPA_PHAAO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|58802768|gb|AAW82488.1| ATP synthase CF1 alpha chain [Phalaenopsis aphrodite subsp.
           formosana]
          Length = 507

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 109/434 (25%), Positives = 189/434 (43%), Gaps = 16/434 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ +  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELIEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIKEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEGGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSD-LSSEDVFQEI 433
            SD L+ ED    I
Sbjct: 425 QSDPLAVEDQIATI 438


>gi|326391017|ref|ZP_08212566.1| ATP synthase F1, alpha subunit [Thermoanaerobacter ethanolicus JW
           200]
 gi|325992962|gb|EGD51405.1| ATP synthase F1, alpha subunit [Thermoanaerobacter ethanolicus JW
           200]
          Length = 506

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 110/440 (25%), Positives = 185/440 (42%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + E+  KN        + G++         +  L   +  G+ V  +   
Sbjct: 1   MSIRPEEISSVIEEKIKNFDFNLETQEIGHVIQSGDGIAKIYGLDNAI-YGEMVEFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S  +G V+ +  D V +  +G  E++  GD+V   GR   +       GRV+N LG+PID
Sbjct: 57  SGVVGMVLNLEEDTVGVVVLGDPEKVKEGDIVKRTGRIMEVPVGKEMLGRVVNPLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I    PP + R+ V+   +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPINY-ETKRPIEYPAPPIVRRKSVDTPLQTGILAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V   +           + VV +T+ +S  L+
Sbjct: 176 TAIAIDTIINQKDKGVYCIYVAIGQKASTVAGIVNMLEKYGAMEYTTVVASTASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E+F  +G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEHFMYQGKDVLVVYDDLSKHAIAYRTISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSARLADEYGGGSLTALPIVETLAGDISAYIPTNVISITDGQIYLESELFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   L   + ++ E +     G     +D    + + Q
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKKVAGRLRLELSQYRELQVFARFG---SDLDKATLEVLRQ 412

Query: 410 VPIIYDFLKQSPSD-LSSED 428
              I +  KQ     +  ED
Sbjct: 413 GERIVEITKQPQYQPMPVED 432


>gi|239828587|ref|YP_002951211.1| F0F1 ATP synthase subunit alpha [Geobacillus sp. WCH70]
 gi|259585430|sp|C5D992|ATPA_GEOSW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|239808880|gb|ACS25945.1| ATP synthase F1, alpha subunit [Geobacillus sp. WCH70]
          Length = 502

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  I         L   V  G+ V         +G  + 
Sbjct: 10  ALIKQQIENYESEIQVSDVGTVIQIGDGIARAHGL-DNVMSGELVEFSNG---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPIETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGAAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLARGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QDLH 425


>gi|161784177|ref|YP_001595493.1| ATPase alpha subunit [Lemna minor]
 gi|190358179|sp|A9L981|ATPA_LEMMI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|88696755|gb|ABD48480.1| ATPase alpha subunit [Lemna minor]
          Length = 507

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 110/430 (25%), Positives = 185/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + VV  G +  +      V  L + V  G+ V  +      +G  + 
Sbjct: 11  SIIRERIEQYTREVKVVNTGTVLQVGDGIARVHGLDK-VMAGELVEFEEG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +  +G G  I  G  V   G+  +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESNNVGVVLMGDGLLIQEGSSVKATGKIAQIPVSDGYLGRVLNALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIIARRSVYEPLQTGIIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVTALQERGAMDYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SNELGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS S     D
Sbjct: 423 QSQSAPLGVD 432


>gi|149390339|ref|YP_001294337.1| ATP synthase CF1 alpha subunit [Dioscorea elephantipes]
 gi|190358172|sp|A6MMJ2|ATPA_DIOEL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|148668031|gb|ABR01415.1| ATP synthase CF1 alpha subunit [Dioscorea elephantipes]
          Length = 507

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNIGVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMHREQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDL 424
            SD 
Sbjct: 425 QSDP 428


>gi|313896865|ref|ZP_07830412.1| ATP synthase F1, alpha subunit [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312974312|gb|EFR39780.1| ATP synthase F1, alpha subunit [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 505

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 103/437 (23%), Positives = 185/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + ++  KN      V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMNPEEITSIIKERIKNYDVDLNVNDVGTVLEVGDGIAHIYGLDK-AMAGELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           ++  G V+ +  + V    +G    I  GD V   GR   +       GRV++ALG+PID
Sbjct: 57  NEVYGLVLNLEQESVGAVLLGGEALIKEGDTVKRTGRIMQVPVGEAMIGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P   +R+ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIDTKEFR-PVESPAPGIADRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +      I     +G++   V   ++    G  ++ ++VV AT+ +S  L+
Sbjct: 176 TAIAVDTILNQKGQNCICVYVAIGQKASTVARVVKTLEDGGAMEYTIVVAATAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  KG + L + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEYFMYKGGHALCVYDDLSKHAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G+ITA+  +     + +  I  +V SI DG I+L+      G  P
Sbjct: 296 RLLERAAKLSDALGAGSITALPIIETLAGDLSAYIPTNVISITDGQIMLDTDSFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AISVGLSVSRVGGSAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ+     S
Sbjct: 413 GARMVETLKQAQYSPLS 429


>gi|218247506|ref|YP_002372877.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. PCC 8801]
 gi|257061158|ref|YP_003139046.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. PCC 8802]
 gi|226739867|sp|B7K5I8|ATPA_CYAP8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218167984|gb|ACK66721.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 8801]
 gi|256591324|gb|ACV02211.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 8802]
          Length = 503

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L Q    G+ +  +      +G  + 
Sbjct: 11  SIIRQQIESYDQTVTVSNVGTVLQVGDGTARIYGLEQ-AMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  G  V   G+  ++       GRV++ALG+PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGTGLDIQEGSTVKATGKIAQVPVGEALIGRVVDALGRPIDGKGDINTTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESMAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + I           ++VV A +++   L+ +AP T  +
Sbjct: 186 NQKSEDVICVYVAIGQKASTVAQVIGTLEEKGAMAYTIVVAANANDPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 MAEYFMYKGKATLVIYDDLSKQAQAYRQLSLLLKRPPGREAYPGDVFYIHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQSQLARGQRLREVLK 422

Query: 419 QSPS 422
           Q  +
Sbjct: 423 QPEN 426


>gi|320529506|ref|ZP_08030591.1| ATP synthase F1, alpha subunit [Selenomonas artemidis F0399]
 gi|320138217|gb|EFW30114.1| ATP synthase F1, alpha subunit [Selenomonas artemidis F0399]
          Length = 505

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 103/437 (23%), Positives = 185/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + ++  KN      V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMNPEEITSIIKERIKNYDVDLNVNDVGTVLEVGDGIAHIYGLDK-AMAGELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           ++  G V+ +  + V    +G    I  GD V   GR   +       GRV++ALG+PID
Sbjct: 57  NEVYGLVLNLEQESVGAVLLGGEALIKEGDTVKRTGRIMQVPVGEAMIGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P   +R+ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIDTKEFR-PVESPAPGIADRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +      I     +G++   V   ++    G  ++ ++VV AT+ +S  L+
Sbjct: 176 TAIAVDTILNQKGQNCICVYVAIGQKASTVARVVKTLEDGGAMEYTIVVAATAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  KG + L + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEYFMYKGGHALCVYDDLSKHAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G+ITA+  +     + +  I  +V SI DG I+L+      G  P
Sbjct: 296 RLLERAAKLSDALGAGSITALPIIETLAGDLSAYIPTNVISITDGQIMLDTDSFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AISVGLSVSRVGGSAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ+     S
Sbjct: 413 GARMVETLKQAQYSPLS 429


>gi|154246021|ref|YP_001416979.1| ATP synthase F1, alpha subunit [Xanthobacter autotrophicus Py2]
 gi|226739957|sp|A7IH29|ATPA_XANP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|154160106|gb|ABS67322.1| ATP synthase F1, alpha subunit [Xanthobacter autotrophicus Py2]
          Length = 509

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 105/436 (24%), Positives = 184/436 (42%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      V  L   V  G+ V  +       G
Sbjct: 12  LKEQIQNFGQEAE------VSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG---TRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSL 119
             + + +D V I   G   EI  G  V                GRV++ALG PIDG   +
Sbjct: 62  MALNLEIDNVGIVIFGSDREIKEGQTVKRTRAIVDAPVGKGLLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST--- 176
              +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+    
Sbjct: 122 VYTE-RRRVDVKAPGIIPRKSVHEPMQTGLKAIDALIPIGRGQRELIIGDRQTGKTAVAL 180

Query: 177 --LLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
             +L+    +   D       +   VG++   V +F++        + S+VV AT+ ++ 
Sbjct: 181 DSILNQKPINQGTDEKAKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAATASDAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP T   + EYF   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQFLAPFTGTAMGEYFRDNGMHALIIHDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKLNDSLGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLESDLFYQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++   +   + ++ E   +     +   +D    K 
Sbjct: 361 IRPAVNVGLSVSRVGSSAQIKAMKQVAGKIKGELAQYRE---LAAFAQFGSDLDASTQKL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQS  
Sbjct: 418 LNRGARLTELLKQSQF 433


>gi|85374581|ref|YP_458643.1| F0F1 ATP synthase subunit alpha [Erythrobacter litoralis HTCC2594]
 gi|123293698|sp|Q2N8Z5|ATPA_ERYLH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|84787664|gb|ABC63846.1| ATP synthase alpha subunit [Erythrobacter litoralis HTCC2594]
          Length = 509

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 185/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ +D   N      V + G + S+      +  L   V  G+ V      
Sbjct: 1   MDIRAAEISKVIKDQIANFGTEAQVSEVGSVLSVGDGIARIHGL-DNVQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD V        +       GRV++ALG PID
Sbjct: 59  --VQGMALNLEADNVGVVIFGSDAEIKEGDNVKRTETIVDVPVGKALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V++  ++G++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIETTE-RRRVELKAPGIIPRKSVDEPVQSGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T ++    ++  D       +   VG++   V + ++    +     S+VV AT
Sbjct: 176 TAVAIDTFINQKTVNESDDESKKLYCVYVAVGQKRSTVAQIVKSLEENGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T   + E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGCAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMNDDNGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGVRPAINVGLSVSRVGGAAQTKAMKKVSGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ        +
Sbjct: 413 STQKLLNRGARLTELLKQPQFSPMPFE 439


>gi|304392608|ref|ZP_07374548.1| ATP synthase F1, alpha subunit [Ahrensia sp. R2A130]
 gi|303295238|gb|EFL89598.1| ATP synthase F1, alpha subunit [Ahrensia sp. R2A130]
          Length = 509

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 181/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      +  + +D  KN      V + G + S+      V  L Q V  G+ V   G  
Sbjct: 1   MDIRAAEITAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGLDQ-VQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V   G    +       GRV++ LG PID
Sbjct: 59  --IQGMALNLETDNVGVVIFGNDRSIKEGDTVKRTGSIVDVPVGKELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KSKQRARVDVKAPGIIPRKSVHEPMATGLKAVDALIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + ++     +                +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIILDTFLNQAPAHKGKDEGEKLYCVYVAVGQKRSTVAQFVKILEERGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T   + EYF   G + L+  D +++ A S R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFTGCAMGEYFRDNGMHALIGYDDLSKQAVSYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + GN   TA+  +   G++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERSAKLGDKAGNGSLTALPVIETQGNDVSAFIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSAAQFKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ+  
Sbjct: 413 STQRLLNRGARLTELLKQAQF 433


>gi|121602713|ref|YP_988450.1| F0F1 ATP synthase subunit alpha [Bartonella bacilliformis KC583]
 gi|158513071|sp|A1UR47|ATPA_BARBK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120614890|gb|ABM45491.1| ATP synthase F1, alpha subunit [Bartonella bacilliformis KC583]
          Length = 511

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 102/443 (23%), Positives = 179/443 (40%), Gaps = 29/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ ++  KN        + G++ S+      V  L   V  G+ V      
Sbjct: 1   MDIRPSEISKILKEQIKNFDQEAEFSEIGWVLSVGDGIARVYGL-DNVQAGEMVSFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --VQGMALNLEMDNVGVVIFGSDRDIREGDTVKRLGSIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +    +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPLNAKN-RRRVDVKAPGIIPRQSVHEPMSTGLKAIDALIPIGRGQRELVIGDRQTGK 175

Query: 175 ------------STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
                           +           I   +G++   V +F++          S++V 
Sbjct: 176 TAILLDTFLNQKPFHENEAGSDQDKVYCIYVAIGQKRSTVAQFVKVLEERGALDYSIIVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +APL    + EYF   G + L+  D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSE--KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER          G++TA+  +    ++ +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERAAKLNADNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +
Sbjct: 356 TNLFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D    + +++   + + LKQ   
Sbjct: 413 DASTQRLLNRGARLTELLKQPQF 435


>gi|224372371|ref|YP_002606743.1| F0F1 ATP synthase subunit alpha [Nautilia profundicola AmH]
 gi|223589493|gb|ACM93229.1| ATP synthase F1, alpha subunit [Nautilia profundicola AmH]
          Length = 499

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 110/434 (25%), Positives = 187/434 (43%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E+Y  K  V + G +         V  L+  V  G+ V  +       G
Sbjct: 3   QEITSIIKERIENYDLKVDVEEVGKVIYSADGIAKVYGLT-NVMAGEMVEFETGEK---G 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V  +  D V +  +G G +I+ G  V   G+   +       GRV+NALG+PIDG   +
Sbjct: 59  LVFNLEADNVGVVVLGKGTDITEGSSVKRLGKLISVPVGEALIGRVVNALGEPIDGKGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              +    +  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 119 EATEYRY-VEEKAPGIMARKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTVAL 177

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + +     I   VG++   V   +           ++VV A++ E+  L+ +AP 
Sbjct: 178 DTILNQKNEDVICIYVAVGQKQSTVANIVRILEEHGAMDYTIVVNASASEAASLKFLAPY 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             VT+ EYF   G + L++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 238 AGVTMGEYFRDNGRHALIVYDDLSKHADAYREMSLLLRRPPGREAYPGDVFYLHSRLLER 297

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +   G +    I  +V SI DG I L  +L  +G  P ++  
Sbjct: 298 AAKLNDELGAGSLTALPIIETKGGDVAAYIPTNVISITDGQIFLETNLFNKGIRPAINVG 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  +L   + +F E         +   +D    K + +   + 
Sbjct: 358 LSVSRVGGAAQIKAMKQVAGNLRLDLAQFRELE---AFSQFASDLDEASRKQLERGERLV 414

Query: 415 DFLKQSPSDLSSED 428
           + LKQ        +
Sbjct: 415 EILKQPAYSPLPVE 428


>gi|85858475|ref|YP_460677.1| F0F1 ATP synthase subunit alpha [Syntrophus aciditrophicus SB]
 gi|124007204|sp|Q2LQZ7|ATPA1_SYNAS RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|85721566|gb|ABC76509.1| ATP synthase alpha chain [Syntrophus aciditrophicus SB]
          Length = 504

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 189/428 (44%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + +++   DY K L V + G + S+      +  + +     + +   G     +G V+ 
Sbjct: 11  QIISKQIRDYEKKLDVSETGTVLSVGDGIARIYGV-ENAMAMELLEFPGG---IMGMVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  GD+V   G+  +I       GRVI+A G+PIDG   LG  +
Sbjct: 67  LEADNVGVAVLGDVTHIKEGDIVKRTGKIAQIPVGEALLGRVIDATGEPIDGKGPLGATE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            S  I    P  + RQ V +   TG++ ID  TP+  GQR  +     IGK+ +   ++ 
Sbjct: 127 FSR-IEMIAPGVIKRQPVNEPMYTGLKAIDAMTPIGRGQRELIIGDRQIGKTAIGIDAII 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D   K I   +G++   V + +E+    D +  + VV   + +   L+ +A     +
Sbjct: 186 RQKDTGVKCIYVAIGQKKSTVSQIVENLRKHDAMSYTCVVAGCASDPATLQYIAAYAGCS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  +G + L+I D +++ A + R+I+      P    YP  +F    RLLER    
Sbjct: 246 IGEYFRDRGQDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDIFYNHSRLLERSARV 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG + L  SL   G  P ++   SVS
Sbjct: 306 SADLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPSLFFSGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D      + +   + + LK
Sbjct: 366 RVGGAAQVKAMKQVAGTLKLDLAQYRE---LASFAQFGSDLDKATQAQLDRGVRLVEILK 422

Query: 419 QSPSDLSS 426
           Q      S
Sbjct: 423 QPQFQPMS 430


>gi|69214356|gb|AAZ03786.1| ATP synthase alpha chain [Yucca schidigera]
          Length = 506

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 106/428 (24%), Positives = 187/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKARGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +        ++VV   +D    L+ +AP T   +A
Sbjct: 188 KGKNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER     S
Sbjct: 248 EYFMYREQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGS 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 KLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            SD  + +
Sbjct: 425 QSDPLTVE 432


>gi|148242977|ref|YP_001228134.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. RCC307]
 gi|166201683|sp|A5GV72|ATPA_SYNR3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|147851287|emb|CAK28781.1| ATP synthase alpha chain [Synechococcus sp. RCC307]
          Length = 505

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V   G +  +      V  L + V  G+ VV +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGTVLQVGDGIARVYGLDK-VMAGELVVFEDGTE---GLALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+   +       GRV+N LG+P+DG   +   D
Sbjct: 67  LEDDNVGVVLMGEGYGIQEGSTVKATGKIASVPVGEAMLGRVVNPLGQPMDGKGEIASTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           + + I +  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 VRL-IENPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V +  E          +V+V A + E+  L+ +AP T   
Sbjct: 186 NQKSEDVVCVYVAIGQKAASVAQVTEVLRERGALDYTVIVAAGASEAASLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D      + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQAQLGRGKRLRELLK 422

Query: 419 QSPS 422
           Q+  
Sbjct: 423 QAQF 426


>gi|11466686|ref|NP_039282.1| ATP synthase CF1 alpha subunit [Marchantia polymorpha]
 gi|114519|sp|P06283|ATPA_MARPO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|11655|emb|CAA28068.1| atpA [Marchantia polymorpha]
          Length = 507

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 103/430 (23%), Positives = 187/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  SIIRKQIEQYNQEVKIVNIGTVLQVGDGIARIYGLDK-VMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGAVLMGDGLTIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGKGQIPASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 FRL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +  +      + ++VV  T++    L+ +AP T   
Sbjct: 186 NQKGQNVVCVYVAIGQKASSVAQVVNTFEDRGALEYTIVVAETANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSNLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 423 QSQSAPLSVE 432


>gi|290490174|gb|ADD31494.1| ATP synthase CF1 alpha subunit protein [Ilex cornuta]
          Length = 508

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 186/421 (44%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T  ++A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMDYTIVVAETADSPATLQYLAPYTGASLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  + ++ L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKEHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 HLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|307208992|gb|EFN86192.1| ATP synthase subunit alpha, mitochondrial [Harpegnathos saltator]
          Length = 548

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G    I
Sbjct: 65  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDRHI 120

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG  SL    L   I +K P  + R  
Sbjct: 121 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGSLN-NKLRFRIGTKAPGIIPRVS 179

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V +  +TGI+ +D   P+  GQR  +      GK+ L      +                
Sbjct: 180 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAGEEKKKLYC 239

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +  +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 240 IYVAIGQKRSTVAQIVKRLTDSGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 299

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 300 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNENLGGGSL 359

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 360 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 419

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 420 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 470


>gi|56551135|ref|YP_161974.1| F0F1 ATP synthase subunit alpha [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761491|ref|ZP_04759579.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753214|ref|YP_003226107.1| F0F1 ATP synthase subunit alpha [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81598341|sp|Q5NQZ1|ATPA_ZYMMO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56542709|gb|AAV88863.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374398|gb|EER63895.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258552577|gb|ACV75523.1| ATP synthase F1, alpha subunit [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 509

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 181/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++++  +  +       V + G + S+      V  L + V  G+ V     +
Sbjct: 1   MEIRAAEISKVIREQIEGFGADAEVSEVGRVISVGDGIARVYGLDK-VEAGEMVTF---S 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +  D V +   G   E+  GD V   G+   +       GRV++ALG PID
Sbjct: 57  SGVQGMALNLEADNVGVVIFGSDLEVGEGDTVRRTGQIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L        P  + R+ V +  +TGI+ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLRRRSEEMAPGIIPRKSVHEAVQTGIKALDALVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +      +                I   +G++   V + +           S+VV AT
Sbjct: 176 TAIAIDAFINQKQVNSGSDNTKKLFCIYVAIGQKRSTVAQIVRQLEEMGAMEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ + P +A ++ EYF     + L++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLVPYSACSMGEYFRDNKQHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMSDKMGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAINVGLSVSRVGSAAQTKAMKKVAGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              K +++   + + LKQ   
Sbjct: 413 STQKLLNRGKRLTELLKQPQF 433


>gi|114799519|ref|YP_760595.1| ATP synthase F1 subunit alpha [Hyphomonas neptunium ATCC 15444]
 gi|123128755|sp|Q0C0Z8|ATPA_HYPNA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114739693|gb|ABI77818.1| ATP synthase F1, alpha subunit [Hyphomonas neptunium ATCC 15444]
          Length = 511

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 109/441 (24%), Positives = 181/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  +   ++ + +   +N      V   G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDISPAEISGILKSQIENFGVEAEVSDVGQVLSVGDGIARVYGL-DSVQAGELVEFNGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V                GRV+NALG+PID
Sbjct: 59  --IKGMALNLEKDNVGVVIFGEDRSIKEGDTVKRTSEIVAAPVGKALLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L       ++  K P  + R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLKDVAARSQVDVKAPGIIPRKSVHEPMMTGIKAIDGMIPVGRGQRELIIGDRQTGK 176

Query: 175 -----STLLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                 T+L+    +D           +   +G++   V + ++          ++VV A
Sbjct: 177 TAICIDTILNQKPTNDAAKSDKDKLFCVYVAIGQKRSTVAQVVKVLEERGALDYTIVVSA 236

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ ES  L+ +AP T  T+ E+F   G + L+I D +++ A + R+++      P    Y
Sbjct: 237 TASESAPLQYLAPFTGCTMGEWFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      + GN   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 297 PGDVFYLHSRLLERAAKLNDDNGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 356

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P V+   SVSR+   A +   KK+  S+   + ++ E   +     +   +D
Sbjct: 357 DLFNSGIRPAVNVGLSVSRVGSAAQTKAMKKVAGSMKGELAQYRE---MAAFAKFGSDLD 413

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
               + +++   + + LKQ  
Sbjct: 414 AATQRLLNRGARLTELLKQPQ 434


>gi|56421895|ref|YP_149213.1| F0F1 ATP synthase subunit alpha [Geobacillus kaustophilus HTA426]
 gi|261420765|ref|YP_003254447.1| F0F1 ATP synthase subunit alpha [Geobacillus sp. Y412MC61]
 gi|297531560|ref|YP_003672835.1| ATP synthase F1 subunit alpha [Geobacillus sp. C56-T3]
 gi|319768435|ref|YP_004133936.1| ATP synthase F1 subunit alpha [Geobacillus sp. Y412MC52]
 gi|81557689|sp|Q5KUJ1|ATPA_GEOKA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56381737|dbj|BAD77645.1| F0F1-type ATP synthasealpha chain [Geobacillus kaustophilus HTA426]
 gi|261377222|gb|ACX79965.1| ATP synthase F1, alpha subunit [Geobacillus sp. Y412MC61]
 gi|297254812|gb|ADI28258.1| ATP synthase F1, alpha subunit [Geobacillus sp. C56-T3]
 gi|317113301|gb|ADU95793.1| ATP synthase F1, alpha subunit [Geobacillus sp. Y412MC52]
          Length = 502

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 175/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G  + 
Sbjct: 10  ALIKQQIENYESQIQVSDVGTVIQVGDGIARAHGL-DNVMSGELVEFANG---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -TRPIESPAPGVMDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLARGARTVEVLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QDLHQP 427


>gi|226968660|ref|YP_002808620.1| ATP synthase CF1 alpha chain [Micromonas sp. RCC299]
 gi|226431138|gb|ACO55544.1| ATP synthase CF1 alpha chain [Micromonas sp. RCC299]
          Length = 504

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 101/431 (23%), Positives = 185/431 (42%), Gaps = 15/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E YS+   VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SVIRQQIEQYSQEAQVVNVGTVLQVGDGIARIYGLEK-VMAGELLEFKDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  GD V   G+  ++     + GRV++AL +PIDG   +   D
Sbjct: 67  LESDNVGAVLMGEGLSIQEGDAVKATGKIAQVPVGEAFLGRVVDALARPIDGKGDIPSTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIIARKSVYEPLQTGLVSIDAMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           +++V   ++    L+ +AP T  +
Sbjct: 186 NQKGGDCICVYVAIGQKASSVAQIVTTLTNAGAMDYTIIVAENANSPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYSGRATLIIYDDLSKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   +G++TA+  +   G + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 NESLGEGSMTALPIIETQGGDVSAYIPTNVISITDGQVFLSADLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGTLKLELAQFAELE---AFSQFASDLDQATQNQLARGVRLRELLK 422

Query: 419 QSPSDLSSEDV 429
           Q+ S   + D+
Sbjct: 423 QAQSAPLTVDM 433


>gi|237836829|ref|XP_002367712.1| ATP synthase alpha chain, putative [Toxoplasma gondii ME49]
 gi|211965376|gb|EEB00572.1| ATP synthase alpha chain, putative [Toxoplasma gondii ME49]
 gi|221483857|gb|EEE22161.1| ATP synthase alpha chain, putative [Toxoplasma gondii GT1]
 gi|221505142|gb|EEE30796.1| ATP synthase alpha chain, putative [Toxoplasma gondii VEG]
          Length = 565

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 185/440 (42%), Gaps = 28/440 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           + +   +++L E+       Q      G + S+      +  L + V  G+ V  Q   +
Sbjct: 53  KISPSEMSRLLEERIAGWKTQTSTEEVGRVVSVGDGIARLFGL-EGVQAGELVEFQNGMT 111

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V +   G    +  GD V   GR    P      GRV++ALG PIDG
Sbjct: 112 ---GMALNLETDNVGVVIFGDDRSVLEGDSVKRTGRIVDVPIGPGLLGRVVDALGNPIDG 168

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +   +    +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK 
Sbjct: 169 KGPIPAKE-RRRVELKAPGIIPRKSVHEPMMTGLKCVDALVPVGRGQRELIIGDRQTGKT 227

Query: 175 ----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVAT 223
                 +++    +D  D        I   VG++   V + ++     D +K + VV AT
Sbjct: 228 AVAVDAIINQKEINDSTDDESKKLYCIYVAVGQKRSTVAQIVKALEQRDAMKYTTVVAAT 287

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP +   + E+F   G + ++I D +++ A + R+++      P    YP
Sbjct: 288 ASEAAPLQFLAPYSGCAMGEWFRDSGRHCVIIYDDLSKQATAYRQMSLLLRRPPGREAYP 347

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 348 GDVFYLHSRLLERAAKMGDKSGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 407

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  ++   + ++ E   +     +   +D 
Sbjct: 408 LFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDA 464

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              + + +   + + LKQ  
Sbjct: 465 STRQLLTRGTALTELLKQRQ 484


>gi|161567476|ref|YP_323121.2| F0F1 ATP synthase subunit alpha [Anabaena variabilis ATCC 29413]
 gi|115312236|sp|Q3M9W0|ATPA_ANAVT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 506

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L +    G+ +  +      +G    
Sbjct: 12  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEK-AMAGELLEFEDG---TVGIAQN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G EI  G  V   GR  +I       GRV++ALG+ IDG   +   +
Sbjct: 68  LEEDNVGAVLMGEGREIQEGSTVTATGRIAQIGVGEALIGRVVDALGRAIDGKGDIKASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 128 SRL-IESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   ++          +VVV A + E   L+ +AP T  T
Sbjct: 187 NQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVAAGASEPATLQFLAPYTGAT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 307 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAVNPGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 367 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKATQDQLARGQRLRELLK 423

Query: 419 QSPSDLSS 426
           QS +   S
Sbjct: 424 QSQNQPLS 431


>gi|75283641|sp|Q589B3|ATPA_SILLA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|62149322|dbj|BAD93464.1| ATP synthase CF1 alpha chain [Silene latifolia]
          Length = 507

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEKYNREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFE---ERTIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSDAYLGRVINALAKPIDGRGEISTSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNMFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 FLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQP 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|188997521|ref|YP_001931772.1| ATP synthase F1, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226739950|sp|B2V6N6|ATPA_SULSY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|188932588|gb|ACD67218.1| ATP synthase F1, alpha subunit [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 504

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 102/431 (23%), Positives = 181/431 (41%), Gaps = 14/431 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE+L +  E++  +  + + G +  +      +  L +   +G+ +  +   S  +G V 
Sbjct: 10  LESLNKQIEEFQVSANLEEVGTVIQVGDGVARIYGLEK-AMMGEMLEFE---SGIVGVVF 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V    +G    +  G +V   G+   +       GRV++ LG PIDG   L   
Sbjct: 66  NLEEDNVGAVLLGSDVAVREGSIVKRTGKILSVPVGKGLLGRVVDGLGNPIDGKGPLTDI 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
                +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++
Sbjct: 126 AYYSPVEKIAPGVVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTIAIDTI 185

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
             +       I   +G++   V   +E          + VV ATS +   ++ +AP    
Sbjct: 186 LNQKGQGVYCIYVAIGQKRANVVHIVETLQKHGAMEYTTVVAATSSDPATMQYIAPFVGC 245

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TI EYF   G + L+I D +T+ A++ R+++      P    YP  VF    RLLER   
Sbjct: 246 TIGEYFRDNGMHALVIYDDLTKHAYAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAK 305

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++   SV
Sbjct: 306 LNDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLEADLFYKGIRPAINAGISV 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + ++ E         +   +D      + +   + + L
Sbjct: 366 SRVGGAAQIKAMKQVAGTLRLDLAQYRELE---AFVQFASELDKATQAQIARGQRMVELL 422

Query: 418 KQSPSDLSSED 428
           KQ P+     +
Sbjct: 423 KQPPNQPVPVE 433


>gi|296134375|ref|YP_003641622.1| ATP synthase F1, alpha subunit [Thermincola sp. JR]
 gi|296032953|gb|ADG83721.1| ATP synthase F1, alpha subunit [Thermincola potens JR]
          Length = 500

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 175/440 (39%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ + +   +    +      G +  +      +  L +    G+ +   G  
Sbjct: 1   MKLRPEEISSIIKQQIERYRTEVEISDVGTVIQVGDGIARIYGLEE-AMAGEMLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D +    +G   +I  GD V   GR   +       GRV+NALG+PID
Sbjct: 59  --IYGMALNLEEDNIGCVILGPYTQIREGDPVKRTGRIVEVPVGDALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  +    + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTNKFR-PVEKRAEGVIERKSVHEPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +  D     I   +G++   V   ++          ++VV AT+ E   + 
Sbjct: 176 TAIAVDTIINQKDTDVICIYVAIGQKASTVAGVVKTLEEHGAMDYTIVVSATASEPAPML 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F  +G +VL+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 FIAPYAGCAMGEEFMFQGKHVLIIYDDLSKQAAAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERASKLNDELGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESDLFYAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AIHVGLSVSRVGGAAQIKAMKQVAGRLRIDLAQYRE---LAAFAQFGSDLDKATQARLTR 412

Query: 410 VPIIYDFLKQSP-SDLSSED 428
              +   LKQ     +  ED
Sbjct: 413 GERMMAILKQDQYKPMPVED 432


>gi|17227501|ref|NP_484049.1| F0F1 ATP synthase subunit alpha [Nostoc sp. PCC 7120]
 gi|20141206|sp|P12405|ATPA_ANASP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|17134983|dbj|BAB77529.1| ATP synthase subunit alpha [Nostoc sp. PCC 7120]
          Length = 506

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L +    G+ +  +      +G    
Sbjct: 12  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEK-AMAGELLEFEDG---TVGIAQN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G EI  G  V   GR  +I       GRV++ALG+ IDG   +   +
Sbjct: 68  LEEDNVGAVLMGEGREIQEGSTVTATGRIAQIGVGEALIGRVVDALGRAIDGKGDIKASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 128 SRL-IESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   ++          +VVV A + E   L+ +AP T  T
Sbjct: 187 NQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVAAGASEPATLQFLAPYTGAT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 307 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAVNPGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 367 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKATQDQLARGQRLRELLK 423

Query: 419 QSPSDLSS 426
           QS +   S
Sbjct: 424 QSQNQPLS 431


>gi|299830569|ref|YP_003735017.1| ATP synthase CF1 alpha subunit [Durinskia baltica]
 gi|297384933|gb|ADI40232.1| ATP synthase CF1 alpha subunit [Durinskia baltica]
          Length = 504

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 106/428 (24%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y + + V   G +  +      V  L Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIREQIEQYDQEVKVDNIGTVLQVGDGIARVYGLDQ-VMSGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   GR  +I     + GRV+NALG PIDG   +   +
Sbjct: 67  LENDNVGVVLMGTGRQILEGSTVKATGRIAQIPVGEGFLGRVVNALGAPIDGKGEIASTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + +  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TQL-LEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V + +           +++V A++++   L+ +AP     
Sbjct: 186 NQKKENVICVYVGVGQKASTVAQVVNVLEEKGAMSYTIIVSASANDPATLQYIAPYAGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKATLVIYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPVIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAMKKVAGKLKLELAQFAELE---AFSQFASDLDEATQKQLARGTRLREVLK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|138896937|ref|YP_001127390.1| F0F1 ATP synthase subunit alpha [Geobacillus thermodenitrificans
           NG80-2]
 gi|158513842|sp|A4ITJ1|ATPA_GEOTN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|134268450|gb|ABO68645.1| ATPase alpha subunit [Geobacillus thermodenitrificans NG80-2]
          Length = 502

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 175/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  I      V  L   V  G+ V         +G  + 
Sbjct: 10  ALIKQQIENYESQIQVSDVGTVIQIGDGIARVHGL-DNVMSGELVEFANG---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A++ +   L  +AP   V+
Sbjct: 185 NQKGQDMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              KG  ++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGAGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGAAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLARGARTVEVLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QDLHQP 427


>gi|229577739|ref|YP_002836075.1| ATP synthase CF1 alpha subunit [Megaleranthis saniculifolia]
 gi|226933867|gb|ACO92000.1| ATP synthase CF1 alpha subunit [Megaleranthis saniculifolia]
          Length = 507

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 106/428 (24%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSESYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +    +   ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGVMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            +   + D
Sbjct: 425 QAAPLTVD 432


>gi|57505329|ref|ZP_00371258.1| ATP synthase F1, alpha subunit [Campylobacter upsaliensis RM3195]
 gi|57016465|gb|EAL53250.1| ATP synthase F1, alpha subunit [Campylobacter upsaliensis RM3195]
          Length = 501

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 106/439 (24%), Positives = 189/439 (43%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I SI      V  L + +  G+ V  +   
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISIADGVAKVYGL-KNIMAGEMVEFENGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  GD V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVVLGKGEGLKEGDSVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
              S+   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGSINASEFRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +S  L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYTIVVNAGASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGVTMGEYFRDNSKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|11467680|ref|NP_050732.1| ATP synthase CF1 alpha subunit [Guillardia theta]
 gi|5915723|sp|O78475|ATPA_GUITH RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|3603005|gb|AAC35666.1| ATP synthase CF1 subunit a [Guillardia theta]
          Length = 502

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 180/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y + + V   G +  I      V  L Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIRQQIDKYDQAIQVSNVGTVLQIGDGIARVYGLDQ-VMAGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  ++     + GRV+NALG PIDG   +   +
Sbjct: 67  LESDNVGVVLMGEGRGILEGSSVKATGKIAQVPVGKSYLGRVVNALGTPIDGKGDINCSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GKS++      
Sbjct: 127 TRL-IESIAPGIISRKSVCEPIQTGITAIDSMIPIGRGQRELIIGDRQTGKSSVAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   +           + +V A +D+   L+ +AP T   
Sbjct: 186 NQKGEDVVCVYVAVGQKAATVASIVTTLEEKGALDYTCIVAANADDPATLQYIAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF   G   L+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 246 IAEYFMYNGQATLVIYDDLSKQASAYREMSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDKLGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATRNQLARGQRLREILK 422

Query: 419 QSPSDLSSED 428
           Q  +   S +
Sbjct: 423 QPQNSPISVE 432


>gi|323149044|ref|YP_004222824.1| ATPase subunit 1 [Vigna radiata]
 gi|5305369|gb|AAD41619.1|AF071550_4 ATP synthase alpha chain [Vigna radiata]
 gi|308206750|gb|ADO19887.1| ATPase subunit 1 [Vigna radiata]
          Length = 508

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 102/438 (23%), Positives = 179/438 (40%), Gaps = 28/438 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
               L  L E    N      V + G + S+      V  L++ +  G+ V      S  
Sbjct: 6   RAAELTTLLESRITNFYTNLKVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGV 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  
Sbjct: 62  KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +
Sbjct: 122 ALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 180

Query: 178 LSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
                 +                 +   +G++   V + ++     N  + S++V AT+ 
Sbjct: 181 AIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATAS 240

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  
Sbjct: 241 DPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 300

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 301 VFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELF 360

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 361 YRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 417

Query: 404 DKAVHQVPIIYDFLKQSP 421
              +++   + + LKQ  
Sbjct: 418 QALLNRGARLTEVLKQPQ 435


>gi|142003|gb|AAA21991.1| ATP synthase subunit alpha [Nostoc sp. PCC 7120]
          Length = 506

 Score =  322 bits (825), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 110/428 (25%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L +    G+ +  +      +G    
Sbjct: 12  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEK-AMAGELLEFEDG---TVGIAQN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G EI  G  V   GR  +I       GRV++ALG+ IDG   +   +
Sbjct: 68  LEEDNVGAVLMGEGREIQEGSTVTATGRIAQIGVGEALIGRVVDALGRAIDGKGDIKASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 128 SRL-IESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   ++          +VVV A + E   L+ +AP T  T
Sbjct: 187 NQKGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVAAGASEPATLQFLAPYTGAT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGGEAYPGDVFYIHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 307 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAVNPGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 367 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKATQDQLARGQRLRELLK 423

Query: 419 QSPSDLSS 426
           QS +   S
Sbjct: 424 QSQNQPLS 431


>gi|196249754|ref|ZP_03148450.1| ATP synthase F1, alpha subunit [Geobacillus sp. G11MC16]
 gi|196210630|gb|EDY05393.1| ATP synthase F1, alpha subunit [Geobacillus sp. G11MC16]
          Length = 505

 Score =  322 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 175/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  I      V  L   V  G+ V         +G  + 
Sbjct: 13  ALIKQQIENYESQIQVSDVGTVIQIGDGIARVHGL-DNVMSGELVEFANG---VMGMALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 69  LEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 129 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVAIDTIL 187

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A++ +   L  +AP   V+
Sbjct: 188 NQKGQDMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVS 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEYFMYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              KG  ++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 SDAKGAGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 368 RVGGAAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLARGARTVEVLK 424

Query: 419 QSPSDL 424
           Q     
Sbjct: 425 QDLHQP 430


>gi|94312427|ref|YP_585637.1| F0F1 ATP synthase subunit alpha [Cupriavidus metallidurans CH34]
 gi|118573485|sp|Q1LHK8|ATPA_RALME RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|93356279|gb|ABF10368.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Cupriavidus metallidurans CH34]
          Length = 513

 Score =  322 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 106/446 (23%), Positives = 184/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +     L     V   G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRISGLGADAEVRNTGTVISVTDGICRVHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NTYGLALNLERDSVGAVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKETDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +           ++VV AT+ +S  ++
Sbjct: 176 TAVAVDSIINQKGKGVFCVYVAIGQKASTISNVVRKLEEHGAMEYTIVVAATASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEDYVAKFTNGAVTGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDDATRKQLERGRRVTELLKQPQYQP 438


>gi|262038542|ref|ZP_06011911.1| ATP synthase F1, alpha subunit [Leptotrichia goodfellowii F0264]
 gi|261747411|gb|EEY34881.1| ATP synthase F1, alpha subunit [Leptotrichia goodfellowii F0264]
          Length = 501

 Score =  322 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 187/426 (43%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + +    E+Y K L +   G +  +      +  L+  +  G+ +  +   +   G V+ 
Sbjct: 10  KIIRTEIENYKKTLDISNTGTVLEVGDGIARIYGLNNAMS-GELLEFENGTT---GMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  + +     G    I  G +V   G+    P      GRV+N+LG+PIDG  S+   +
Sbjct: 66  LEENNIGAVIFGETRGIKEGGIVKGTGKIAQVPAGEEILGRVVNSLGEPIDGKGSI-TAE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M+I S     ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMDIESPAYGIIDRKPVSEPLQTGIKAIDGMVPIGRGQRELIIGDRQTGKTAIAIDAII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   V +  +    +     + +V AT+ E+  L+ +AP   V 
Sbjct: 185 NQKSNDVYCIYVAIGQKRSTVAQIYKKLEEEGAMEYTTIVAATASEAAPLQYLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G +VL++ D +++ A S RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEYFMLQGKHVLIVYDDLSKHAVSYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++P  SVS
Sbjct: 305 SDELGGGSITALPIVETKAGDISAYIPTNVISITDGQIFLETDLFNSGFRPAINPGVSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      +++   I + LK
Sbjct: 365 RVGGSAQIKAMKQVSSKVKIELAQYNE---LLAFAQFGSDLDKATRDQLNRGAKIMEVLK 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QKQYNP 427


>gi|188580724|ref|YP_001924169.1| F0F1 ATP synthase subunit alpha [Methylobacterium populi BJ001]
 gi|226739909|sp|B1ZEE9|ATPA_METPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|179344222|gb|ACB79634.1| ATP synthase F1, alpha subunit [Methylobacterium populi BJ001]
          Length = 509

 Score =  322 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 100/436 (22%), Positives = 183/436 (41%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + ++      V  L   V  G+ V  +   S   G
Sbjct: 12  LKEQIKNFGQEAE------VTEVGQVLAVGDGIARVYGL-DNVQAGEMVEFE---SGVRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G   EI  G  V   G    +       GRV++ LG PIDG   +
Sbjct: 62  MALNLEQDNVGVVIFGSDREIKEGQTVKRTGAIVDVPVGKGLLGRVVDGLGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK     
Sbjct: 122 QSTE-RRRVDVKAPGIIPRKSVHEPMATGLKAIDALIPVGRGQRELIIGDRQTGKTAIAL 180

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+        D       +   +G++   V +F++        + S+V+ AT+ ++ 
Sbjct: 181 DTILNQKPAHSGTDENAKLYCVYVAIGQKRSTVAQFVKVLEDQGALEYSIVIAATASDAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP     + EYF   G + +++ D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQFIAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER         KG++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMGDAAGKGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D    + 
Sbjct: 361 VRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLDASTQRL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQ   
Sbjct: 418 LNRGARLTELLKQPQF 433


>gi|39995222|ref|NP_951173.1| F0F1 ATP synthase subunit alpha [Geobacter sulfurreducens PCA]
 gi|81703673|sp|Q74GY2|ATPA_GEOSL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|39981984|gb|AAR33446.1| ATP synthase F1, alpha subunit [Geobacter sulfurreducens PCA]
 gi|298504226|gb|ADI82949.1| ATP synthase F1, alpha subunit [Geobacter sulfurreducens KN400]
          Length = 503

 Score =  322 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 104/433 (24%), Positives = 181/433 (41%), Gaps = 20/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     K       V + G I S+      +  L +    G+ +   G  
Sbjct: 1   MEIRAEEISEIIRKQIKEYGKEVEVAETGTIISVGDGIARIHGLDK-AMAGELLEFPGGV 59

Query: 56  SDNLGQVIRINLDIVYICPVGIG-EEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPI 113
           S   G V+ +  D V    +G   E I  G  V   GR   +       GRV+NA+G+PI
Sbjct: 60  S---GMVLNLEEDNVGAAILGEDNENIKEGTTVKRTGRIVEVPVGEALIGRVVNAIGQPI 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +       ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      G
Sbjct: 117 DGKGPINTTTFG-KVEVKAPGIVKRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTG 175

Query: 174 KSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230
           K+ +      +        I   +G++   V + +           ++VV A++ E   L
Sbjct: 176 KTAVAIDTIINQKGGDLICIYVAIGQKRSTVAQVVSKLQEYGAMDYTIVVSASASEPAPL 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP T VT+ EYF   G + L+I D +++ A + R+++      P    YP  VF   
Sbjct: 236 QFIAPYTGVTMGEYFRDNGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 296 SRLLERAAKLSDDCGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGVR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + 
Sbjct: 356 PAINVGLSVSRVGGSAQVKAMKQVAGTLRLNLAQYRE---MAAFAQFGSDLDKATQMQLA 412

Query: 409 QVPIIYDFLKQSP 421
           +   + + LKQ  
Sbjct: 413 RGERLVEILKQPQ 425


>gi|315320537|ref|YP_004072593.1| ATP synthase CF1 subunit alpha [Thalassiosira oceanica CCMP1005]
 gi|283569010|gb|ADB27547.1| ATP synthase CF1 subunit alpha [Thalassiosira oceanica CCMP1005]
          Length = 503

 Score =  322 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 184/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y +++ V   G +  +      V  L Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIREQIEQYDQDVKVDNIGTVLQVGDGIARVYGLDQ-VMSGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   G+  +I     + GRV+N LG PIDG   +   +
Sbjct: 67  LENDNVGVVLMGNGRQILEGGTVKTTGQIAQIPVGEAFLGRVVNPLGVPIDGKGDISTTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      
Sbjct: 127 SRL-VESMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTSIAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V A++++   L+ +AP +   
Sbjct: 186 NQKTEDVVCVYVGIGQKASTIAQVVNVLDEKEAMAYTIIVSASANDPATLQYIAPYSGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYNGKATLIIYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPVIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDEATQKQLARGTRLREILK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|91208868|ref|YP_539029.1| ATP synthase F1 subunit alpha [Physcomitrella patens]
 gi|90991408|dbj|BAE93100.1| ATP synthase F1 subunit alpha [Physcomitrella patens]
          Length = 518

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 100/435 (22%), Positives = 181/435 (41%), Gaps = 24/435 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V  L++ +  G+ V      S   G  + + 
Sbjct: 18  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNK-IQAGEMVEFA---SGVKGMALNLE 73

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +L   +  
Sbjct: 74  NENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGLLGRVVDALGVPIDGKGALSAAE-R 132

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSM 180
             +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK      T+L+ 
Sbjct: 133 RRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQ 192

Query: 181 FARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
              +            +   +G++   V + ++        +  ++V AT+ +   L+ +
Sbjct: 193 KQINTQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYCIIVAATASDPAPLQFL 252

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF   G + L+I D +++ + + R+++      P    +P  VF    RL
Sbjct: 253 APYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRL 312

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 313 LERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAI 372

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  SL   + ++ E   +     +   +D      +++  
Sbjct: 373 NVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQYLLNRGA 429

Query: 412 IIYDFLKQSPSDLSS 426
            + + LKQ      S
Sbjct: 430 RLTEVLKQPQYSPIS 444


>gi|194476686|ref|YP_002048865.1| ATP synthase subunit A [Paulinella chromatophora]
 gi|171191693|gb|ACB42655.1| ATP synthase subunit A [Paulinella chromatophora]
          Length = 505

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ +   G +  +      +  L Q    G+ V  +       G  + 
Sbjct: 11  AILKQQIEDYDKSISISNVGTVLQVGDGIARIYGL-QQCMAGELVEFEDGTE---GLALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G +V   G+   +       GRV+NALG+PIDG   +   D
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSMVKATGKIAAVPVGDAMLGRVVNALGQPIDGKGDII-TD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 126 QTRLIESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E          +++V A++ E   L+ +AP T   
Sbjct: 186 NQKGQDVVCVYIAIGQKAASVANVVEVMRERGALDYTIIVAASASEPAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L++ D +T+ A + R++A      P    YP  +F    RLLER    
Sbjct: 246 IAEYFMYKGKATLVVYDDLTKQAQAYRQMALLLRRPPGREAYPGDIFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQKQLGRGKRLRELLK 422

Query: 419 QSPS 422
           QS  
Sbjct: 423 QSQF 426


>gi|163784955|ref|ZP_02179706.1| F0F1 ATP synthase subunit alpha [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879775|gb|EDP73528.1| F0F1 ATP synthase subunit alpha [Hydrogenivirga sp. 128-5-R1-1]
          Length = 475

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 107/425 (25%), Positives = 183/425 (43%), Gaps = 14/425 (3%)

Query: 5   LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +ETL +  E++  K  + + G +  +      V  L + V  G+ +  +   S   G V 
Sbjct: 9   VETLKKQLEEFEVKANLEEVGTVIQVGDGVARVFGLEKAVM-GEMLEFE---SGVTGVVF 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +  +G    I  G  V   G+   I       GRV++ LG PIDG   +   
Sbjct: 65  NLEEDNVGVVLLGDESLIKEGTTVKRTGKILEIPVGKGLVGRVVDGLGNPIDGKGPIEDI 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
                +    P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++
Sbjct: 125 AYYSPVEKIAPGVVSRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTVAIDTI 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
             +       +   +G++   VR  +E          + VV AT+ +   ++ +AP    
Sbjct: 185 LNQKGQGVYCVYVAIGQKRGVVRHIVETLQKHGAMEYTTVVAATASDPATMQYIAPFVGC 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAEYF   G + L+I D +T+ A++ R+++      P    YP  VF    RLLER   
Sbjct: 245 TIAEYFRDNGMHALVIYDDLTKHAYAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++   SV
Sbjct: 305 LNDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNKGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + +F E         +   +D    + + +   + + L
Sbjct: 365 SRVGGAAQIKAMKQVAGTLRLELAQFRELE---AFVQFASELDKATQQQIARGQRMVELL 421

Query: 418 KQSPS 422
           KQ P+
Sbjct: 422 KQPPN 426


>gi|49474712|ref|YP_032754.1| F0F1 ATP synthase subunit alpha [Bartonella quintana str. Toulouse]
 gi|81695985|sp|Q6FYM1|ATPA_BARQU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49240216|emb|CAF26684.1| ATP synthase alpha chain [Bartonella quintana str. Toulouse]
          Length = 511

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 183/434 (42%), Gaps = 25/434 (5%)

Query: 6   ETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +   D+  K  V + G++ S+      V  L   +  G+ V          G  + 
Sbjct: 10  KILKEQIRDFDQKAEVSEIGWVLSVGDGIARVYGL-DNIQAGEMVSFSNG---VHGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           + +D V +   G   +I  GD V   G    +       GRV++ALG PIDG   L   +
Sbjct: 66  LEIDNVGVVIFGSDRDIREGDSVKRLGAIVDVPVGPALLGRVVDALGNPIDGKGPLKATE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK+ +L     
Sbjct: 126 -RRRVDVKAPGIIPRQSVHEPMPTGLKAIDALIPIGRGQRELVIGDRQTGKTAILLDTFL 184

Query: 184 SDC------------FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           +                  I   +G++   V +F++        + S++V AT+ +   +
Sbjct: 185 NQKPFHEKGAGNEQDKVYCIYVAIGQKRSTVAQFVKVLEERGALEYSIIVAATASDPAPM 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +APL    + EYF   G + L+  D +++ A + R+++      P    YP  VF   
Sbjct: 245 QFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 304

Query: 291 PRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L  +L  +G  
Sbjct: 305 SRLLERAAKLNAENGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETNLFYQGIR 364

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D    + ++
Sbjct: 365 PAVNVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDLDASTQRLLN 421

Query: 409 QVPIIYDFLKQSPS 422
           +   + + LKQ   
Sbjct: 422 RGARLTELLKQPQF 435


>gi|290490190|gb|ADD31502.1| ATP synthase CF1 alpha subunit protein [Berberidopsis corallina]
          Length = 507

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|317052407|ref|YP_004113523.1| ATP synthase F1 subunit alpha [Desulfurispirillum indicum S5]
 gi|316947491|gb|ADU66967.1| ATP synthase F1, alpha subunit [Desulfurispirillum indicum S5]
          Length = 502

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 104/431 (24%), Positives = 181/431 (41%), Gaps = 19/431 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ ++          V + G + S       +  L +    G+ +   G  
Sbjct: 1   MQIKAEEISRIIKEQIAGFEKSFDVQETGKVISAGDGVVRIYGL-ENAMAGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G V+ +  D V    +G    I  GD V   GR  ++       GRV+NA+G+PID
Sbjct: 58  -DLYGLVLNLEEDNVGAVLLGEATAIKEGDTVKRTGRIAQVPVGPEMVGRVVNAIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIDAKEFGY-LERKATGVISRKSVHEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        I   +G++   V   +     +     + VV AT+ E   ++
Sbjct: 176 TTIAIDTILNLKGEDVYCIYVAIGQKRSTVARVVNVLEANGAMAYTTVVAATASEPAPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    TI EYF   G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FLAPYAGCTIGEYFRDNGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLNDDLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFYAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AVNVGISVSRVGGAAQIKAMKQVAGTLKLELAQYRE---LAAFAQFGSDLDPATKAVLDK 412

Query: 410 VPIIYDFLKQS 420
              + + LKQ 
Sbjct: 413 GARLSELLKQP 423


>gi|302669538|ref|YP_003829498.1| ATP synthase F1 alpha subunit AtpA1 [Butyrivibrio proteoclasticus
           B316]
 gi|302394011|gb|ADL32916.1| ATP synthase F1 alpha subunit AtpA1 [Butyrivibrio proteoclasticus
           B316]
          Length = 506

 Score =  322 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 187/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     KN        + G + ++      V+ L   +  G+ +  +   
Sbjct: 1   MELKPEKISEVIRSQIKNYQNAIIQNETGTVLTVGDGIARVSGLLNCMS-GELLEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +   +V     G    IS G  V   GR   +       GRV+NA+G+PID
Sbjct: 59  --TFGMAQNLEETVVSAVLFGEDVGISEGQTVKRTGRVVSVPVGEQMIGRVVNAIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GQGPIEASEYR-PVESPAPGIIARQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
           +T+      +        I   +G++   V   +ED   G  +  ++VV AT+ E   L+
Sbjct: 176 TTIAVDTILNQKGKDVICIYVAIGQKRSTVTSLVEDLKKGGAMDYTIVVAATASEPSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T   + EYF  KG +VL I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YISPYTGCAMGEYFMHKGKHVLCIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDENGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D    + + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLVYSQYRELQSFAQFG---SDLDEDTKQRLAQ 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I + LKQ+ ++    +
Sbjct: 413 GERIVEVLKQNKNNPVPVE 431


>gi|256831124|ref|YP_003159852.1| ATP synthase F1 subunit alpha [Desulfomicrobium baculatum DSM 4028]
 gi|256580300|gb|ACU91436.1| ATP synthase F1, alpha subunit [Desulfomicrobium baculatum DSM
           4028]
          Length = 502

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 102/432 (23%), Positives = 190/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ E   KN        + G + S+      V    +     + +   G  
Sbjct: 1   MQIKAEEISQIIEGQIKNYEKKVEMSETGVVLSVGDGIARVYGC-ENAMAMELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + +G V+ +  D V +  +G  E I  GD+V   GR  ++       GRVI+ LG PID
Sbjct: 58  -NVMGMVLNLEEDSVGVALLGETEHIKEGDIVKRTGRIFQVPVGDAVMGRVIDPLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + DL   +  K P  + R+ V +   TG++ ID  TP+  GQR  +     +GK
Sbjct: 117 GLGPI-QTDLFRNVEIKAPGIIARKSVHEPMYTGLKAIDAMTPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++ A+ +         +G++   V + +E    +   + + V+ +T+ E   L+
Sbjct: 176 TAVGVDAIIAQKNSDIHCFYVAIGQKRSTVAQVVEALRQNGALEYTTVISSTASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+AE++   G + L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 FIAAYCGCTMAEFYRDNGKHALIVYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERSCKVNDKLGAGSLTALPVIETQAGDVSAYIPTNVISITDGQVYLEPNLFMAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKKVAGTLRLDLAQYRE---LAAFAQFGSDLDKATKTKLTR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GERLVELLKQPQ 424


>gi|316996023|dbj|BAD83524.2| ATP synthase F1 subunit 1 [Nicotiana tabacum]
          Length = 509

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 177/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E    N          G + S+      V  L++ +  G+ V      
Sbjct: 3   LSPRAAELTSLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA--- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ LG PID
Sbjct: 59  SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 178 TAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + + LKQ  
Sbjct: 415 AATQALLNRGARLTEVLKQPQ 435


>gi|51891227|ref|YP_073918.1| F0F1 ATP synthase subunit alpha [Symbiobacterium thermophilum IAM
           14863]
 gi|81610725|sp|Q67TB9|ATPA_SYMTH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|51854916|dbj|BAD39074.1| ATP synthase alpha subunit [Symbiobacterium thermophilum IAM 14863]
          Length = 506

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 99/423 (23%), Positives = 175/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E +S  +     G +  +      V  L Q     + +         +G    
Sbjct: 10  SILKQEIERFSTEIETSNVGRVIQVGDGIARVYGL-QSCMASELLEFPNG---IMGMAFN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D + +  +G  E+I  G  V   GR   +       GRV+NALG+P+DG   + + D
Sbjct: 66  LEEDNIGVVILGPDEDIKEGMEVRRTGRVVEVPVGPALIGRVVNALGEPLDGKGPI-ETD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           + + +  K P  + R+ V +  +TG++ ID  TP+  GQR  +    G GK+ +      
Sbjct: 125 MYLPVERKAPGVITRKSVHEPLQTGLKAIDSMTPIGRGQRELIIGDRGTGKTAIAVDTII 184

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      I     +G++   +   ++          ++VV AT+ +   L+ +AP     
Sbjct: 185 NQKGQNCICIYVGIGQKASTIAGVVKKLQETGAMEYTIVVSATASDPAPLQFLAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFRDNGMHALIVYDDLSKHAVAYREMSLLMRRPPGREAYPGDVFYLHSRLLERAAKM 304

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E G  ++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDEYGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAGVRPAINVGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D      + +     + LK
Sbjct: 365 RVGGAAQIDSMKRVSGTLKLDLAQYRE---LAAFAQFGSDLDKATQARIIRGQRTTEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|319409369|emb|CBI83013.1| ATP synthase alpha chain [Bartonella schoenbuchensis R1]
          Length = 511

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 102/443 (23%), Positives = 185/443 (41%), Gaps = 29/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ ++  KN      V + G++ S+ +    V  L   V  G+ V      
Sbjct: 1   MDIRPSEISKILKEQIKNFDQKAEVSEIGWVLSVGNGIARVCGL-DNVQAGEMVSFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + + +D V +   G   +I  GD V   G    +       GRV++ALG PID
Sbjct: 59  --VRGMALNLEMDNVGVVIFGSDRDIREGDCVKRLGSIIDVPVGPALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +      +  K P  + RQ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPI-QTPHRRRVDVKAPGIIPRQSVHEPMVTGLKAIDALVPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSDC------------FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
           + +L     +                  I   +G++   V +F++          S++V 
Sbjct: 176 TAILLDAFLNQKPFHEKGAEHDQDKVYCIYVAIGQKRSTVAQFVKVLEERGALDYSIIVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +APL    + EYF   G + L+  D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFIAPLAGCAMGEYFRDNGQHALIGYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      + G  ++TA+  +    ++ +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERAAKLNGDHGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L  +G  P ++   SVSR+   A     K++  S+   + ++ E   +     +   +
Sbjct: 356 TNLFYQGIRPAINVGLSVSRVGSAAQIKAMKQVAGSIKGELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D    + +++   + + LKQ   
Sbjct: 413 DASTQRLLNRGARLVELLKQKQF 435


>gi|146337562|ref|YP_001202610.1| F0F1 ATP synthase subunit alpha [Bradyrhizobium sp. ORS278]
 gi|158514291|sp|A4YKD8|ATPA_BRASO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146190368|emb|CAL74364.1| ATP synthase subunit alpha, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS278]
          Length = 509

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGVVIFGADREIKEGQTVKRTRAIVDAPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQFTE-RKRVDVKAPGIIPRKSVNEPMATGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T+L+    +   D       +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIALDTILNQKPLNAQPDEKIKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     + +G  ++TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNETQGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGSRLTELLKQPQF 433


>gi|115604919|ref|YP_784371.1| ATP synthase CF1 alpha subunit [Drimys granadensis]
 gi|122164456|sp|Q06H12|ATPA_DRIGR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|112032647|gb|ABH88282.1| ATP synthase CF1 alpha subunit [Drimys granadensis]
          Length = 507

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L Q V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIHGLDQ-VMAGELVEFEEG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICLYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 HLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|212640522|ref|YP_002317042.1| F0F1 ATP synthase subunit alpha [Anoxybacillus flavithermus WK1]
 gi|226739843|sp|B7GMF5|ATPA_ANOFW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|212562002|gb|ACJ35057.1| F0F1-type ATP synthase, alpha subunit [Anoxybacillus flavithermus
           WK1]
          Length = 507

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 109/439 (24%), Positives = 179/439 (40%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N      V   G +  +         L   V  G+ V      
Sbjct: 4   MSIKAEEISALIKKQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMSGELVEFANG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G  + +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+D
Sbjct: 62  --VMGLALNLEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVD 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 120 GLGPIETTE-TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGK 178

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +++      +        I   +G++   VR  +E          ++VV A++ +   L 
Sbjct: 179 TSVAVDTIINQKGKNMICIYVAIGQKESTVRNVVETLRKYGALDYTIVVTASASQPAPLL 238

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ EYF  KG +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 239 FLAPYAGVTMGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHS 298

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER       KG  ++TA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 299 RLLERAAKLSDAKGAGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRP 358

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E         +   +D      + +
Sbjct: 359 AINAGLSVSRVGGAAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLAR 415

Query: 410 VPIIYDFLKQSPSDLSSED 428
                + LKQ   +    +
Sbjct: 416 GARTVEVLKQGLHEPLPVE 434


>gi|325291356|ref|YP_004267537.1| ATP synthase F1 subcomplex alpha subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966757|gb|ADY57536.1| ATP synthase F1 subcomplex alpha subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 502

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 172/423 (40%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L VV  G +  +      +  L +    G+ +   G      G  + 
Sbjct: 10  SIIKQQIERYENALEVVDVGTVIQVGDGIARIYGL-KKAMSGELLEFPGG---IYGMAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D +    +G  E I  GD V   GR   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEEDNIGCVILGPYETIKEGDQVKRTGRIMEVPVGDALIGRVVNVLGQPLDGKGEIAASG 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 126 YR-PIESNAPGVVDRKSVHEPLQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAVAVDTII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          S+VVVAT+ E   +  +AP +   
Sbjct: 185 NQKGQDCICIYVAIGQKQSTVASVVKKLEEHGAMEYSLVVVATASEPAPMLYIAPYSGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFRDNGKHVLIIYDDLTKQAVAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             EKG+  +TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SPEKGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGFRPAINVGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   +  + E   +     +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKQVAGQLRLDLASYRE---LAAFAQFGSDLDKATQARLTRGQKTMEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QGQ 424


>gi|116617093|ref|YP_817467.1| ATP synthase CF1 alpha subunit [Coffea arabica]
 gi|122153606|sp|A0A320|ATPA_COFAR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|116242149|gb|ABJ89664.1| ATP synthase CF1 alpha subunit [Coffea arabica]
          Length = 507

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 NLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|332706680|ref|ZP_08426741.1| ATP synthase F1 subcomplex alpha subunit [Lyngbya majuscula 3L]
 gi|332354564|gb|EGJ34043.1| ATP synthase F1 subcomplex alpha subunit [Lyngbya majuscula 3L]
          Length = 505

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 101/436 (23%), Positives = 186/436 (42%), Gaps = 17/436 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y++   V   G +  +      +  L +    G+ +  +      +G  + 
Sbjct: 11  SIIRQQIQGYNQGFAVSNVGTVLQVGDGIARIYGLEK-CMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  G  V   G+  ++       GRV++ LG+PIDG   +   +
Sbjct: 67  LEQDNVGAVLMGDGLQIQEGSSVTATGKIAQVPVGEALIGRVVDGLGRPIDGKGDIQSTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-VESIAPGIIARRSVCEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           +V+V A +++   L+ +AP T  +
Sbjct: 186 NQKQEDVICVYVAIGQKASTVAQVVNTLQEKGALDYTVIVAANANDPATLQFLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF   G   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYNGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYVHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++P  SVS
Sbjct: 306 NDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGVRPAINPGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F++ +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAMKKVAGKLKLELAQFDDLQ---AFAQFASDLDAATQAQLARGQRLREVLK 422

Query: 419 QSPSDLSSEDVFQEIT 434
           Q  +  S   VF+++ 
Sbjct: 423 QPQN--SPLAVFEQVA 436


>gi|296282409|ref|ZP_06860407.1| F0F1 ATP synthase subunit alpha [Citromicrobium bathyomarinum
           JL354]
          Length = 509

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 183/447 (40%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ +D   N        + G + S+      +  L + V  G+ V   G  
Sbjct: 1   MDIRAAEISKVIKDQIANFDSQAQESEVGTVLSVGDGIARIHGLDK-VQAGEMVEFNGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G    I  GD V        +       GRV++ALG PID
Sbjct: 59  --VKGMALNLEADNVGVVIFGSDTNIKEGDTVRRTETIVDVPVGKALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + +  K P  + RQ V +  ++G++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIATTERRL-VEQKAPGIIPRQGVHEPVQSGLKAIDALVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           S +      +                I   VG++   V + ++    +     ++VV AT
Sbjct: 176 SAVAIDTFINQRDAHKGDDENEKLYCIYVAVGQKRSTVAQIVKQLEENGAMEYTIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP T   + E+F   G + +++ D +++ A + R+++      P    YP
Sbjct: 236 ASEPAPLQYLAPYTGAAMGEFFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E+G  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMSDEQGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  S+   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAINVGLSVSRVGGAAQTKAMKKVAGSIKLELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              K +++   + + LKQ        +
Sbjct: 413 STQKLLNRGARLTELLKQPQFSPMPFE 439


>gi|328769994|gb|EGF80037.1| hypothetical protein BATDEDRAFT_16944 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 545

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 184/421 (43%), Gaps = 22/421 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   GQ + +  D V I   G    I
Sbjct: 63  ETGRVLSIGDGIARVYGL-KNVQAEEMVEF---SSGVKGQALNLEADNVGIVVFGNDRLI 118

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   L        +  K P  + RQ 
Sbjct: 119 KEGDIVKRTGSIVDVPVGMGLLGRVVDALGNPIDGKGPLQDVK-RQRVQVKAPGIIPRQS 177

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDK-----V 190
           V +  +TGI+ ID   P+  GQR  +      GK      T+L+    +   DK      
Sbjct: 178 VNEPMQTGIKCIDSMVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNSSEDKSKRLYC 237

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V +F++     D L+ S+VV AT+ ++  L+ +AP +   + E+F   G
Sbjct: 238 VYVAVGQKRSTVAQFVQTLEENDALQYSIVVAATASDAAPLQFLAPYSGAAMGEHFRDNG 297

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     K    G++
Sbjct: 298 MHSLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKTFGGGSM 357

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 358 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFFKGIRPAINVGLSVSRVGSAAQVK 417

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             K++  SL   + ++ E   +     +   +D      +++   + + LKQ+     S 
Sbjct: 418 AMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTQFLLNRGARLTELLKQNQYSPLSV 474

Query: 428 D 428
           +
Sbjct: 475 E 475


>gi|126022791|ref|NP_054917.2| ATP synthase CF1 alpha subunit [Spinacia oleracea]
 gi|114527|sp|P06450|ATPA_SPIOL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|15988216|pdb|1FX0|A Chain A, Crystal Structure Of The Chloroplast F1-Atpase From
           Spinach
 gi|20150923|pdb|1KMH|A Chain A, Crystal Structure Of Spinach Chloroplast F1-Atpase
           Complexed With Tentoxin
          Length = 507

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 186/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIEGYNREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEITASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  M+R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSLLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           Q  S
Sbjct: 423 QPQS 426


>gi|290490212|gb|ADD31513.1| ATP synthase CF1 alpha subunit protein [Staphylea colchica]
          Length = 507

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF     + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYCERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|254504837|ref|ZP_05116988.1| ATPase FliI/YscN family [Labrenzia alexandrii DFL-11]
 gi|222440908|gb|EEE47587.1| ATPase FliI/YscN family [Labrenzia alexandrii DFL-11]
          Length = 448

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 207/424 (48%), Positives = 290/424 (68%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYIC 73
           D     V   G ++ +++    V+ LS+ VCLGD +  +G++    G++IR+    V + 
Sbjct: 21  DTEIGRVKLSGQVTQVSAEAIRVSGLSRVVCLGDLIQFEGRSGVRQGEIIRLEQKDVVVK 80

Query: 74  PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           P+    +I +G +    G   I P   W GR+INALG+PIDG   L  G  +  +    P
Sbjct: 81  PLERVSDIGIGSVASLMGGLAIHPDLSWRGRIINALGEPIDGQGQLRHGVEAFLLDRAPP 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           PAMNR++V +G +TG+RVID+FTPLC GQRIGVFAGSG+GKSTLL M A    FD V++ 
Sbjct: 141 PAMNREKVTEGVRTGVRVIDLFTPLCVGQRIGVFAGSGVGKSTLLGMLAGFGEFDTVVVG 200

Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           LVGERGREVREFI+D LG+ +  SVVV +T DES + R++AP TA+++AEYF ++G  VL
Sbjct: 201 LVGERGREVREFIDDILGETIANSVVVASTGDESAMQRRLAPKTAMSVAEYFRAQGHKVL 260

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           LILDS TRFAH+ R++A  +GE PVARGYP SVF++L RL+ER GP    +G+IT + SV
Sbjct: 261 LILDSATRFAHAARDVALAAGEPPVARGYPPSVFADLARLIERAGPGASGEGSITGIFSV 320

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LVDGD+HNDP++D++R +LDGHIVL+R  AE GRYPPV+ L S SRLA +AW+ D+++L+
Sbjct: 321 LVDGDDHNDPVSDAIRGLLDGHIVLDRKTAESGRYPPVEILKSTSRLASRAWTEDQQELI 380

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             +  LI  +E+T+D+R++GG++   D  L+KA   VP IY+ ++Q        D F E+
Sbjct: 381 HRIKGLISHYEDTKDLRMMGGFQITGDEHLEKACRLVPRIYEAMRQGAKQPVPGDPFAEL 440

Query: 434 TKKL 437
            + L
Sbjct: 441 AQAL 444


>gi|108773233|ref|YP_635719.1| CF1 alpha subunit of ATP synthase [Chara vulgaris]
 gi|118573475|sp|Q1ACM8|ATPA_CHAVU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|77157889|gb|ABA61930.1| CF1 alpha subunit of ATP synthase [Chara vulgaris]
          Length = 508

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 104/430 (24%), Positives = 189/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y + + +V  G +  +      +  L Q V  G+ +  +    + +G  + 
Sbjct: 14  SIIRKKIEEYDQEVKIVNIGTVLQVGDGIARIYGLDQ-VMAGELLEFE---DNTVGIALN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I     + GRV+NAL +PIDG   +   +
Sbjct: 70  LESDNVGAVLMGEGLTIQEGSSVKATGKIAQIPVGDSYLGRVVNALARPIDGKGDIDTSE 129

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ +      
Sbjct: 130 SRL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAVDTIL 188

Query: 184 SDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +  +     L  ++VV  T++ S  L+ +AP T  +
Sbjct: 189 NQKGQDVICVYVAIGQKASSVAQVVNTFEDRSALSYTIVVAETANSSATLQYLAPYTGAS 248

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG + L++ D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 249 LAEYFMYKGRHTLVVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 308

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 309 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 368

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 369 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 425

Query: 419 QSPSDLSSED 428
           Q+ S   S +
Sbjct: 426 QAQSSPLSVE 435


>gi|78224598|ref|YP_386345.1| F0F1 ATP synthase subunit alpha [Geobacter metallireducens GS-15]
 gi|115312248|sp|Q39Q54|ATPA_GEOMG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78195853|gb|ABB33620.1| ATP synthase F1 subcomplex alpha subunit [Geobacter metallireducens
           GS-15]
          Length = 503

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 103/433 (23%), Positives = 181/433 (41%), Gaps = 20/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     K       V + G I S+      +  L +    G+ +   G  
Sbjct: 1   MEIRAEEISEIIRKQIKEYGKEVEVAETGTIISVGDGIARIHGLDK-AMAGELLEFPGGV 59

Query: 56  SDNLGQVIRINLDIVYICPVGIG-EEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPI 113
           S   G V+ +  D V    +G   E I  G  V   GR   +       GRV+NA+G+PI
Sbjct: 60  S---GMVLNLEEDNVGAAILGEDNENIKEGTTVKRTGRIVEVPVGEALIGRVVNAIGQPI 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +       ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      G
Sbjct: 117 DGKGPINTSTFG-KVEVKAPGIVKRKSVHQPMQTGLKAIDAMVPVGRGQRELIIGDRQTG 175

Query: 174 KSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230
           K+ +      +        I   +G++   V + +           +++V A++ E   L
Sbjct: 176 KTAVAIDTIINQKGGDLICIYVAIGQKRSTVAQVVSKLQEHGAMDYTIIVSASASEPAPL 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP T VT+ EYF   G + L+I D +++ A + R+++      P    YP  VF   
Sbjct: 236 QFIAPYTGVTMGEYFRDNGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 296 SRLLERAAKLSDDCGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGVR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + 
Sbjct: 356 PAINVGLSVSRVGGSAQVKAMKQVAGTLRLNLAQYRE---MAAFAQFGSDLDKATQMQLA 412

Query: 409 QVPIIYDFLKQSP 421
           +   + + LKQ  
Sbjct: 413 RGERLVEILKQPQ 425


>gi|148252013|ref|YP_001236598.1| F0F1 ATP synthase subunit alpha [Bradyrhizobium sp. BTAi1]
 gi|158513267|sp|A5E948|ATPA_BRASB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146404186|gb|ABQ32692.1| ATP synthase F1 subcomplex alpha subunit [Bradyrhizobium sp. BTAi1]
          Length = 509

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGVVIFGADREIKEGQTVKRTRAIVDAPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQFTE-RKRVDVKAPGIIPRKSVNEPMATGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T+L+    +   D       +   VG++   V +F++        + S+VV AT
Sbjct: 176 TAIALDTILNQKPLNAQPDEKIKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYLAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     + +G  ++TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNETQGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 ATQRLLNRGSRLTELLKQPQF 433


>gi|116325975|ref|NP_001070823.1| ATP synthase subunit alpha, mitochondrial [Danio rerio]
 gi|115528192|gb|AAI24812.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Danio rerio]
          Length = 551

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   LG  +    +  K P  + R  
Sbjct: 125 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPLGSKE-RRRVGLKAPGIIPRIS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V +  +TGI+ +D   P+  GQR  +      GK+ +      +                
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNEGTEEKKKLYC 243

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 244 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDNFGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 424 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 474


>gi|357982|prf||1305286A ATPase alpha,F1
          Length = 507

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 101/438 (23%), Positives = 177/438 (40%), Gaps = 28/438 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
               L  L E    N          G + S+      V  L++ +  G+ V      S  
Sbjct: 6   RAAELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGELVEFA---SGV 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  
Sbjct: 62  KGIALNLENENVGIVVFGSDTSIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +
Sbjct: 122 ALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 180

Query: 178 LSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
                 +                 +   +G++   V + ++     N  + S++V AT+ 
Sbjct: 181 AIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATAS 240

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  
Sbjct: 241 DPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 300

Query: 286 VFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 301 VFYLHSRLLERAAKWSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELF 360

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 361 YRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 417

Query: 404 DKAVHQVPIIYDFLKQSP 421
              +++   + + LKQ  
Sbjct: 418 QALLNRGARLTEVLKQPQ 435


>gi|319790623|ref|YP_004152256.1| ATP synthase F1, alpha subunit [Thermovibrio ammonificans HB-1]
 gi|317115125|gb|ADU97615.1| ATP synthase F1, alpha subunit [Thermovibrio ammonificans HB-1]
          Length = 502

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 105/433 (24%), Positives = 177/433 (40%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E +++L     +         + G +  +      V  L + V  G+ V  +   
Sbjct: 1   MQIRAEEISELIRKQIEEFEASVNLDETGIVIKVGDGVARVYGL-ENVEYGEVVEFEDGT 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  D V +  +G G  I  G      GR   +       GRV++ LG PID
Sbjct: 60  E---GVAFNLEEDNVGVVLLGEGRGIVEGGKAKRTGRILDMPVGDGLIGRVLDPLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGDIEYTE-RRAVERIAPGIVTRKPVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDC--FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           +T+      +        +   VG++   V + I+       +  ++V+ AT+ +   L+
Sbjct: 176 TTVAIDTILNQKREGVICVYCAVGQKRSTVAQTIQLLKELGAMDYTIVISATASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A T+AEYF   G   L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAACTVAEYFRDTGRAALIVYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L  +G+ P
Sbjct: 296 RLLERAAKLNDELGAGSLTALPIVETKAGDISAYIPTNVISITDGQIFLETDLFYKGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + R+ E         +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGKLRLELARYRELE---AFAQFASDLDPATRAQLER 412

Query: 410 VPIIYDFLKQSPS 422
              + + LKQ P 
Sbjct: 413 GRRLMELLKQPPH 425


>gi|253702622|ref|YP_003023811.1| F0F1 ATP synthase subunit alpha [Geobacter sp. M21]
 gi|259585429|sp|C6E9F3|ATPA_GEOSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|251777472|gb|ACT20053.1| ATP synthase F1, alpha subunit [Geobacter sp. M21]
          Length = 502

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 181/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     K       V + G I SI      +  L +    G+ +   G  
Sbjct: 1   MEIKAEEISEIIRKQIKEYGTEVAVAETGTIISIGDGIARIHGLDK-AMAGELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D V    +G   EI  GD V   G+   +       GRV++A+G PID
Sbjct: 59  --ITGMVLNLEEDNVGAAILGEFSEIKEGDSVKLTGKIVEVPVGPALIGRVVDAIGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D   ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GLGPIN-TDTFGKVEVKAPGIVKRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +           ++VV AT+ E   L+
Sbjct: 176 TAVAIDTIINQKGGDVVCIYVAIGQKRSTVAQVVSKLKEHGAMDYTIVVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F   G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYTGVTMGEFFRDSGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKVSDDCGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQVKAMKQVAGTLRLALAQYRE---MAAFAQFGSDLDKATQMQLAR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GARLVEILKQPQ 424


>gi|328545831|ref|YP_004305940.1| ATP synthase subunit alpha [polymorphum gilvum SL003B-26A1]
 gi|326415571|gb|ADZ72634.1| ATP synthase subunit alpha [Polymorphum gilvum SL003B-26A1]
          Length = 509

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 178/441 (40%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  K       V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MDIRAAEISAILKDQIKGFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD V   G    +       GRV++ LG P+D
Sbjct: 59  --VRGMALNLETDNVGVVIFGSDREIKEGDTVKRTGAIVEVPVGKGLLGRVVDPLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  V      GK
Sbjct: 117 GKGPIEAAE-RRRVDVKAPGILPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T L+        D       I   VG++   V +F++          S+VV AT
Sbjct: 176 TAIILDTFLNQKPLHQGDDEGNKLYCIYVAVGQKRSTVAQFVKTLEDAGAMAYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++  L+ +AP     + EYF   G + ++  D +++ A + R+++      P    +P
Sbjct: 236 ASDAAPLQFLAPFAGCAMGEYFRDNGMHAVIGYDDLSKQAVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++ G+   TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLNEDNGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++   +   + ++ E   +     +   +D 
Sbjct: 356 LFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVAGPIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 TTQRLLNRGARLTELLKQPQF 433


>gi|260888962|ref|ZP_05900225.1| ATP synthase F1, alpha subunit [Leptotrichia hofstadii F0254]
 gi|260861409|gb|EEX75909.1| ATP synthase F1, alpha subunit [Leptotrichia hofstadii F0254]
          Length = 501

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 187/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     E+Y  +L +   G +  +      +  LS  V  G+ +  +   
Sbjct: 1   MRIKPEEISKIIRSEIENYKSSLDISNTGTVLEVGDGIARIYGLSD-VMAGELLEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +    +     G  + I  G +V   G+    P      GRV++ALG PID
Sbjct: 59  --TVGMALNLEESNIGAVIFGKTQGIKEGSIVKGLGKVAEVPAGNEMLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D  M I  +    + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGTI-TADKYMPIERQASGIIARKPVTQPMQTGIKAIDGMFPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +   +    +   +G++   V +  +        + +++V AT+ ES  L+
Sbjct: 176 TAIAIDSIINQKNNDVICVYVAIGQKRSTVAQIYKKLEETGALEYTIIVAATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP + V + EYF  +G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYSGVAMGEYFMDQGKDVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDKLGGGSITALPIVETQAGDISAYIPTNVISITDGQIFLETDLFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ S +   + ++ E   +     +   +D      +++
Sbjct: 356 AINAGVSVSRVGGAAQIKAMKQVASKVKLELAQYNE---LLAFTQFGSDLDKATRDQLNR 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GSKIMEVLKQPQ 424


>gi|197120313|ref|YP_002140740.1| F0F1 ATP synthase subunit alpha [Geobacter bemidjiensis Bem]
 gi|226739889|sp|B5EFI9|ATPA_GEOBB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|197089673|gb|ACH40944.1| ATP synthase F1, alpha subunit [Geobacter bemidjiensis Bem]
          Length = 502

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 181/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     K       V + G I SI      +  L +    G+ +   G  
Sbjct: 1   MEIKAEEISEIIRKQIKEYGTEVAVAETGTIISIGDGIARIHGLDK-AMAGELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D V    +G   EI  GD V   G+   +       GRV++A+G PID
Sbjct: 59  --ITGMVLNLEEDNVGAAILGEFSEIKEGDSVKLTGKIVEVPVGPALIGRVVDAIGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D   ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GLGPIN-TDTFGKVEVKAPGIVKRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +           ++VV AT+ E   L+
Sbjct: 176 TAVAIDTIINQKGGDVVCIYVAIGQKRSTVAQVVSKLKEHGAMDYTIVVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F   G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYTGVTMGEFFRDSGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKVSDDCGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQVKAMKQVAGTLRLALAQYRE---MAAFAQFGSDLDKATQMQLAR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GARLVEILKQPQ 424


>gi|52220795|ref|YP_086951.1| ATP synthase CF1 alpha subunit [Panax ginseng]
 gi|75289360|sp|Q68S21|ATPA_PANGI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|51235298|gb|AAT98494.1| ATPase alpha subunit [Panax ginseng]
          Length = 507

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|167750727|ref|ZP_02422854.1| hypothetical protein EUBSIR_01705 [Eubacterium siraeum DSM 15702]
 gi|167656406|gb|EDS00536.1| hypothetical protein EUBSIR_01705 [Eubacterium siraeum DSM 15702]
 gi|291532062|emb|CBK97647.1| type III secretion system ATPase, FliI/YscN [Eubacterium siraeum
           70/3]
 gi|291558201|emb|CBL35318.1| type III secretion system ATPase, FliI/YscN [Eubacterium siraeum
           V10Sc8a]
          Length = 434

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 164/425 (38%), Positives = 244/425 (57%), Gaps = 10/425 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN--SDNLGQVIRINLD 68
           L E  + +     G I  I     T+        +GD      K+  S    +V+  N  
Sbjct: 7   LTELRTTDTYKYLGKIEKIVG--MTIEASGPLCSIGDVCRIYTKDMKSHIPAEVVGFNEH 64

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V + P    E I  G +V + G +  +       GR+I+ALG P+D  + +   D ++ 
Sbjct: 65  KVLLMPYTDLEGIGPGSIVDNTGDKLNVRVGDKLIGRIIDALGNPLDDGEPIEYTD-TVP 123

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I       + R ++ +  + G++ ID    +  GQR+G+FAGSG+GKSTL+ M AR    
Sbjct: 124 IAGIPVNPLTRPKIHEPIELGVKAIDGLLTMGKGQRMGIFAGSGVGKSTLMGMIARKVKA 183

Query: 188 DKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+LVGERGREVREFI  D   + + +SVVVVATSD+  ++R   P+TA  IAEYF 
Sbjct: 184 DLNVIALVGERGREVREFIENDLGEEGMARSVVVVATSDQPAMMRNKCPMTATAIAEYFC 243

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           S+G +VLL++D++TRFA + REI  ++GE PVARGY  S+++ +P+LLER G  EK  G+
Sbjct: 244 SQGKDVLLMMDNLTRFAMAQREIGLSTGEPPVARGYTPSIYAAMPKLLERAGNFEK--GS 301

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT + +VLV+GD+ N+PI+D+VR I+DGHIVL+R +A +  YP +D L S+SRL      
Sbjct: 302 ITGIYAVLVEGDDTNEPISDTVRGIIDGHIVLSRKIAAQNHYPAIDILPSISRLMSAIAD 361

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LS 425
            +  K    L +L+  +    D+  IG Y+ G +  LD+A+ ++  I DFL Q   +  S
Sbjct: 362 PEHNKAAGKLRNLLALYNNNADLISIGAYKKGTNPALDEAIKKIDKINDFLMQGMYESFS 421

Query: 426 SEDVF 430
            ED  
Sbjct: 422 MEDTI 426


>gi|212634370|ref|YP_002310895.1| flagellum-specific ATP synthase [Shewanella piezotolerans WP3]
 gi|212555854|gb|ACJ28308.1| ATPase FliI/YscN [Shewanella piezotolerans WP3]
          Length = 446

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 243/434 (55%), Gaps = 5/434 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
             LAQ     +  +    G +  +  +    T       +G     +  + + + +VI  
Sbjct: 10  SKLAQHHSKVNPFVAEASGQLVRVVGLTLEATG--CRASVGSLCSIETMSGELVAEVIGF 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + +++Y+ P+     +  G  V   G+   +S      GRV++  G PIDG  +L + D 
Sbjct: 68  DDELLYLMPIEELSGVLPGAKVTPLGQQSGLSVGLALLGRVLDGSGLPIDGLGNL-QTDQ 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                +     + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R 
Sbjct: 127 KAPTHAPAINPLARRAISEPLDVGVRAINSMLTVGKGQRMGLFAGSGVGKSVLLGMMTRG 186

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  T+  IAE
Sbjct: 187 TTADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIAE 246

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF   G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    +
Sbjct: 247 YFRDMGYSVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGGK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A  
Sbjct: 307 QGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPM 366

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + +  + +  +  +   +++ +D+  IG Y  G D  +D A+   P +  FL+Q+  D
Sbjct: 367 VITTEHLEAMRRVKQVYSLYQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQTMKD 426

Query: 424 LSSEDVFQEITKKL 437
             + D    +  +L
Sbjct: 427 AITFDSSTLMLSQL 440


>gi|122893975|ref|YP_001004171.1| ATP synthase CF1 alpha subunit [Ranunculus macranthus]
 gi|190358195|sp|A1XGM3|ATPA_RANMC RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|85540789|gb|ABC70741.1| ATP synthase CF1 alpha subunit [Ranunculus macranthus]
          Length = 507

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 186/421 (44%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  + K    +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEK---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEDYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +    +   ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGVMEYTIVVAETADAPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|295400690|ref|ZP_06810667.1| ATP synthase F1, alpha subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112620|ref|YP_003990936.1| ATP synthase F1 subunit alpha [Geobacillus sp. Y4.1MC1]
 gi|294977271|gb|EFG52872.1| ATP synthase F1, alpha subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217721|gb|ADP76325.1| ATP synthase F1, alpha subunit [Geobacillus sp. Y4.1MC1]
          Length = 502

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + +   G +  +         L   V  G+ V         +G  + 
Sbjct: 10  ALIKQQIENYESEIQISDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPIETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESRAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRSVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGAAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLARGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QDLH 425


>gi|309388820|gb|ADO76700.1| type III secretion system ATPase, FliI/YscN [Halanaerobium
           praevalens DSM 2228]
          Length = 435

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 161/422 (38%), Positives = 254/422 (60%), Gaps = 11/422 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           N+    G+I+ +  +   +  +     +G+  + +G+N D   +V+  + + V + P+G 
Sbjct: 17  NMTRNFGHINRVIGLV--IESIGPQASIGELCLIKGENGDIKAEVVGFDDNKVLMMPIGE 74

Query: 78  GEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E I  G  V     + ++       G++I+  G  I G+D  G  ++   + +K P  +
Sbjct: 75  MEGIRPGARVIATDEKLKVKVGKELLGKIIDGSGNIISGEDPSGLNEV--PVNNKPPDPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R++     G+R ID F     GQR+G+FAGSG+GKSTLL M AR+   D  +I LVG
Sbjct: 133 TRARIKAPLSLGVRCIDGFLTCGKGQRMGIFAGSGVGKSTLLGMAARNTNADINVIGLVG 192

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVR+FI +D   + L++S+VVVATSD+  +LR  A   A  IAEYF  +G++VLL+
Sbjct: 193 ERGREVRDFIEKDLGAEGLERSIVVVATSDQPALLRVKAANIATAIAEYFRDQGEDVLLM 252

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR A ++RE+    GE P  RGYP SVF+ELP+LLER G ++   G+ITA+ +VLV
Sbjct: 253 MDSVTRVAMALREVGLAIGEPPATRGYPPSVFAELPKLLERTGTNDV--GSITALYTVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+P++D+VR ILDGHI L+R LAE   YP VD L+SVSR+ +   S +  +  + 
Sbjct: 311 EGDDFNEPVSDTVRGILDGHISLSRELAESSHYPAVDVLSSVSRIMEDIVSKEHSQAAAK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  +I  + ++ D+  IG Y  G +  +D+A+ ++  I +FL Q  ++   E  ++   +
Sbjct: 371 LQKIIATYNQSEDLINIGAYEKGSNPEVDRAIAKIDEINNFLTQGINE---EANYESTVQ 427

Query: 436 KL 437
           +L
Sbjct: 428 QL 429


>gi|323143309|ref|ZP_08078000.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Succinatimonas hippei YIT 12066]
 gi|322416926|gb|EFY07569.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Succinatimonas hippei YIT 12066]
          Length = 438

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 163/441 (36%), Positives = 244/441 (55%), Gaps = 12/441 (2%)

Query: 5   LETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--G 60
           LE + Q+ ED     + +   G +  +       +     V +G+  + +    + +   
Sbjct: 3   LEYIGQMLEDAVDEVSSLEIRGRVDQVVGTIIRASV--PGVKVGELCILRNPGENWMLRA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + +   + P+G  E IS    V   G    +       GRV+N +G   DG  +L
Sbjct: 61  EVVGFSKNTALLTPLGDLEGISYHTEVIPTGHVLSVPVGEELLGRVLNGVGDVADGGPAL 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P AM R+ +EK    G+RV+D       GQR+G+FA +G GKSTLLS
Sbjct: 121 KTHKF-YPVYADPPAAMQRKLIEKPVSLGLRVLDGVLTCGQGQRMGIFAAAGGGKSTLLS 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
              +    +  +++L+GERGREVREFI  D   + +KK+V+VV+TSD S + R  A  TA
Sbjct: 180 SIIKGTSAEICVLALIGERGREVREFIERDLGPEGMKKAVLVVSTSDRSSMERLKAAYTA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G NVLL++DS+TRF  + REI   +GE P  RG+P SVFS LP+L+ER G
Sbjct: 240 TAIAEYFRDEGKNVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPKLMERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S+K  G+ITA+ +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP +D LASVS
Sbjct: 300 NSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAIDVLASVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +   S + K     L  ++ ++ E   +  +G Y+ G D   D A+  +  +  FLK
Sbjct: 358 RVMNTIVSKEHKAAAQKLRQILAKYSEIELLVQLGEYKKGNDAEADFALSHIDAVNKFLK 417

Query: 419 QSPSDLSS-EDVFQEITKKLQ 438
           Q   + SS ED   ++ K ++
Sbjct: 418 QGLDEKSSFEDTVSQLLKIVK 438


>gi|306485977|gb|ADM92637.1| atpA [Davidia involucrata]
          Length = 507

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E YS+ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYSREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKRVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|307265812|ref|ZP_07547363.1| ATP synthase F1, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919207|gb|EFN49430.1| ATP synthase F1, alpha subunit [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 506

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 111/440 (25%), Positives = 185/440 (42%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + E+  KN        + G++         +  L   +  G+ V  +   
Sbjct: 1   MSIRPEEISSVIEEKIKNFDFNLETQEIGHVIQSGDGIARIYGLDNAI-YGEMVEFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S  +G V+ +  D V +  +G  E++  GD+V   GR    P      GRV+N LG+PID
Sbjct: 57  SGVVGMVLNLEEDTVGVVVLGDPEKVKEGDIVKRTGRIMEVPAGKEMLGRVVNPLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I    PP + R+ V+   +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPINY-EAKRPIEYPAPPIVRRKSVDTPLQTGILAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V   +           + VV +T+ +S  L+
Sbjct: 176 TAIAIDTIINQKDKGVYCIYVAIGQKASTVAGIVNMLEKYGAMEYTTVVASTASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E+F  +G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEHFMYQGKDVLVVYDDLSKHAIAYRTISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSARLADEYGGGSLTALPIVETLAGDISAYIPTNVISITDGQIYLESELFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   L   + ++ E +     G     +D    + + Q
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKKVAGRLRLELSQYRELQVFARFG---SNLDKATLEVLRQ 412

Query: 410 VPIIYDFLKQSPSD-LSSED 428
              I +  KQ     +  ED
Sbjct: 413 GERIVEITKQPQYQPMPVED 432


>gi|18075732|emb|CAD11286.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|225544109|ref|YP_002720097.1| atpA [Jatropha curcas]
 gi|224979550|gb|ACN72677.1| atpA [Jatropha curcas]
          Length = 507

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|156598439|gb|ABU85479.1| ATP synthase CF1 alpha subunit [Musa acuminata]
          Length = 506

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 187/424 (44%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E YS+ + +V  G +  +      V  L + V  G+ V  Q      +G  + + 
Sbjct: 13  IRERIEQYSREIKIVNTGTVLQVGDGIARVHGLDE-VMAGELVEFQEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEGYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFREKGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +G + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRGQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSNS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFTELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDL 424
            SD 
Sbjct: 425 QSDP 428


>gi|331268170|ref|YP_004347819.1| ATP synthase CF1 alpha subunit [Chlorella variabilis]
 gi|325296347|gb|ADZ05067.1| ATP synthase CF1 alpha subunit [Chlorella variabilis]
          Length = 506

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 183/436 (41%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + +  V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  SIIKQQIEQYQQEVKAVNVGTVFQVGDGIARIYGLDK-VMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GRV+N+L +PIDG   +   +
Sbjct: 67  LEAKNVGAVLMGEGTAVQEGSSVRATGKIAQIPVGDGYLGRVVNSLARPIDGKGEIATTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESPAPGIISRRSVHEPLQTGIVAIDAMIPIGRGQRELIIGDRQTGKTAIAVDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V AT+D    L+ ++P T   
Sbjct: 186 NQKGKNVVCVYVAIGQKASSIAQVVNTLQERGAMDYTIIVAATADSPATLQYLSPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRHTLVIYDDLTKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 NDKLGSGSMTALPVVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLRELLK 422

Query: 419 QSP-SDLSSEDVFQEI 433
           QS  S LS ED    I
Sbjct: 423 QSQSSPLSLEDQVASI 438


>gi|543866|sp|P05493|ATPAM_PEA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|13381|emb|CAA28964.1| unnamed protein product [Pisum sativum]
 gi|286140|dbj|BAA03524.1| F1 ATPase alpha subunit [Pisum sativum]
          Length = 507

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 101/438 (23%), Positives = 177/438 (40%), Gaps = 28/438 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
               L  L E    N          G + S+      V  L++ +  G+ V      S  
Sbjct: 6   RAAELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGELVEFA---SGV 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  
Sbjct: 62  KGIALNLENENVGIVVFGSDTSIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +
Sbjct: 122 ALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 180

Query: 178 LSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
                 +                 +   +G++   V + ++     N  + S++V AT+ 
Sbjct: 181 AIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATAS 240

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  
Sbjct: 241 DPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 300

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 301 VFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELF 360

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 361 YRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 417

Query: 404 DKAVHQVPIIYDFLKQSP 421
              +++   + + LKQ  
Sbjct: 418 QALLNRGARLTEVLKQPQ 435


>gi|291278940|ref|YP_003495775.1| flagellar-specific ATP synthase FliI [Deferribacter desulfuricans
           SSM1]
 gi|290753642|dbj|BAI80019.1| flagellar-specific ATP synthase FliI [Deferribacter desulfuricans
           SSM1]
          Length = 436

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 176/439 (40%), Positives = 259/439 (58%), Gaps = 15/439 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQ 61
           K L+ L  +  D   N VV  G ++ I     T+      + +G     +G    + L +
Sbjct: 2   KKLKLLKNINFD---NSVVVTGKVTKIVG--LTIEADGPLLSIGTRCEIEGVGGKNILAE 56

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFH--WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           ++    D V + P    E I+ G +V +  +G   +  S    GRV++ LG+PID +  +
Sbjct: 57  IVGFKDDRVILMPYAESEGIAPGSIVRNVAYGN-VVKVSEELLGRVLDGLGRPIDSNRVI 115

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +L   + ++ P  + R+ ++    TG++ ID    +  GQR+G+FAGSG+GKS LL 
Sbjct: 116 TNYELK-SVYTEPPSPLEREIIKDAIHTGVKAIDALITIGKGQRVGIFAGSGVGKSVLLG 174

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GERGREVREFI  D   + LKKSVVVVATSD+SP++RKM    A
Sbjct: 175 MIARNSSADVNVIALIGERGREVREFIERDLGEEGLKKSVVVVATSDQSPLVRKMGAFVA 234

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIAEYF S G +V+ ++DS+TRFA + REI    GE P  +GY  SVF+ LP+LLER G
Sbjct: 235 TTIAEYFRSLGKDVMFMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFALLPKLLERAG 294

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++K +G IT + +VLV+GD+ NDPIADSVRSI+DGHIVL+R+LA +  +P +D + S S
Sbjct: 295 -TKKGEGTITGLYTVLVEGDDLNDPIADSVRSIIDGHIVLDRNLAAKNHFPAIDVMMSAS 353

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL  +       +    L  LI  + E  D+  IG Y  G +  +D+A+ ++ +I +FLK
Sbjct: 354 RLMKEIVDERHFEAAGRLRDLIATYREAEDLINIGAYVKGSNKKIDEAILKIDLINNFLK 413

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   + S    F+E  K+L
Sbjct: 414 QKIDETS---PFEETKKQL 429


>gi|169831908|ref|YP_001717890.1| flagellar protein export ATPase FliI [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638752|gb|ACA60258.1| flagellar protein export ATPase FliI [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 454

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 162/450 (36%), Positives = 245/450 (54%), Gaps = 19/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG---GYISSITSVYYTVTCLSQYVCLGDFVVH--QGKN 55
           M +  + L   A     N V      G ++ +  +   V  L+ +  +G+       G+ 
Sbjct: 1   MSERTQNLDLNAWRARVNAVRPFRLLGRVTKVVGLTVEVEGLNSF--IGEICEVYVPGEI 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G+V+        + P+G    I  G  V   GR   +       G+V+N LG P+ 
Sbjct: 59  QPVRGEVVGFRGGTSLLMPLGELRGIRPGCRVEPLGRALTVRVGEHLLGQVVNGLGYPLA 118

Query: 115 GDDSL-----GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
                       G     + +  P  ++R+R+++  +TG+R ID F     GQR+GVF+G
Sbjct: 119 NGGDTRNGTRPDGAEEYPVHNAPPDPLSRRRIDRPLETGVRAIDGFLTCGRGQRLGVFSG 178

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESP 228
           SG+GKS LL M  R    D  +++LVGERGREV++FI  D   ++L +SVVVVATSD+  
Sbjct: 179 SGVGKSVLLGMLCRHCSADVNVVALVGERGREVKDFIERDLGPESLARSVVVVATSDQPA 238

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           ++R  A + A  IAEYF  +G +VL ++DS+TRFA + RE+    GE P  RGY  SVF+
Sbjct: 239 LIRLRAAMVATAIAEYFRDRGKDVLFLMDSVTRFALAQREVGLAVGEPPTTRGYTPSVFA 298

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LP+LLER G S    G+IT   +VLV+GD+  +P+AD+VRSILDGHIVL+R LA +  Y
Sbjct: 299 LLPKLLERAGTS--PAGSITGFYTVLVEGDDLQEPVADAVRSILDGHIVLDRELAAKNHY 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D L SVSRL     + + ++  + L  L+  F++  D+  IG Y  G + ++D+A+ 
Sbjct: 357 PAIDVLQSVSRLMPDITAPEHQRCAAKLRRLLAAFKQAEDLVNIGAYVSGSNPLVDEALA 416

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +   I +FL+Q  ++      F E   +LQ
Sbjct: 417 KHEAIMEFLRQDHTEFGG---FAESLARLQ 443


>gi|69214352|gb|AAZ03784.1| ATP synthase alpha chain [Ranunculus macranthus]
          Length = 506

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 186/421 (44%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  + K    +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEK---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEDYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +    +   ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGVMEYTIVVAETADAPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|313199651|ref|YP_004021267.1| ATP synthase CF1 alpha subunit [Isoetes flaccida]
 gi|291575380|gb|ADE18093.1| ATP synthase CF1 alpha subunit [Isoetes flaccida]
          Length = 507

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 181/420 (43%), Gaps = 14/420 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L Q+ +   +  V+  G +  +         L + V  G+ V  +       G  + +  
Sbjct: 14  LKQIEQYNQEVKVMNIGTVLQVGDGIARAYGLDE-VMAGELVEFEDG---TAGIALNLES 69

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +  +
Sbjct: 70  DNVGVVLMGDGLAIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGKGQIPASEFRL 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +  
Sbjct: 130 -IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQK 188

Query: 187 FDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAE 243
              VI     +G++   V + + ++        ++VV  T++    L+ +AP     +AE
Sbjct: 189 GQNVICVYVAIGQKASSVAQVVNNFEERGAMEYTIVVAETANSPATLQYLAPYAGAALAE 248

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      +
Sbjct: 249 YFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQ 308

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D   SVSR+ 
Sbjct: 309 LGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIDVGISVSRVG 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++   L   + +F E         +   +D      + +   + + LKQS 
Sbjct: 369 SAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQSQ 425


>gi|18075720|emb|CAD11277.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 185/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYAGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|231585|sp|Q01915|ATPAM_SOYBN RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|22739|emb|CAA78407.1| atpA [Glycine max]
          Length = 508

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 101/438 (23%), Positives = 177/438 (40%), Gaps = 28/438 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
               L  L E    N          G + S+      V  L++ +  G+ V      S  
Sbjct: 6   RAAELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGV 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  
Sbjct: 62  KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +
Sbjct: 122 ALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 180

Query: 178 LSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
                 +                 +   +G++   V + ++     N  + S++V AT+ 
Sbjct: 181 AIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATAS 240

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  
Sbjct: 241 DPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 300

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 301 VFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELF 360

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 361 YRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 417

Query: 404 DKAVHQVPIIYDFLKQSP 421
              +++   + + LKQ  
Sbjct: 418 QALLNRGARLTEVLKQPQ 435


>gi|329847482|ref|ZP_08262510.1| ATP synthase F1, alpha subunit [Asticcacaulis biprosthecum C19]
 gi|328842545|gb|EGF92114.1| ATP synthase F1, alpha subunit [Asticcacaulis biprosthecum C19]
          Length = 510

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 181/426 (42%), Gaps = 21/426 (4%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           Q+A    +  V   G + S+      V  L + V  G+ V+         G  + +  D 
Sbjct: 15  QIAGFGQEADVSDVGQVLSVGDGIARVYGLDK-VQAGEMVLFPKAG--VKGMALNLEKDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I   G   +IS GD V   G    +       GRV+N LG+PIDG   +   +    +
Sbjct: 72  VGIVIFGEDRDISEGDEVRRLGEIVDVPVGKGLLGRVVNPLGEPIDGKGPIVSTE-RRRV 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFAR 183
             K P  + R+ V +  +TGI+ ID   P+  GQR  +      GK       +L+  + 
Sbjct: 131 DVKAPGIIPRKSVHEPVQTGIKAIDTLIPVGRGQRELIIGDRQTGKTAVAIDAILNQKSV 190

Query: 184 SDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
           +   D       I   +G++   V + ++    +   + +++V AT+ E   L+ +AP  
Sbjct: 191 NAGDDEKAKLYCIYVAIGQKRSTVAQIVKALEENGALEYTIIVSATASEPAPLQFLAPFA 250

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              + EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 251 GCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 310

Query: 298 GPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
               ++ G+   TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+   
Sbjct: 311 AKLNEDNGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFFQGIRPAVNVGL 370

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A     K++  ++   + ++ E   +     +   +D    + + +   + +
Sbjct: 371 SVSRVGSSAQIKAMKQVAGAIKGDLAQYRE---MAAFAKFGSDLDAATQRLLARGARLTE 427

Query: 416 FLKQSP 421
            LKQ  
Sbjct: 428 LLKQPQ 433


>gi|188587436|ref|YP_001918981.1| ATP synthase F1, alpha subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|226739917|sp|B2A3G4|ATPA_NATTJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|179352123|gb|ACB86393.1| ATP synthase F1, alpha subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 508

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/435 (24%), Positives = 184/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + ++ + +D   N      V + G +  I      V  L + V   + V   G  
Sbjct: 1   MSIRPDEISTVLKDKIANYESQVDVYEVGTVLYIGDGIARVHGL-ENVMANELVEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    I  GD V   GR   +       GRV+N +G+P D
Sbjct: 58  -EIYGMALNLEEDNVGCVLLGEYSHIKEGDQVKRTGRIIEVPVGDDLVGRVVNPVGEPRD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    + ++ P  ++R+ VE+  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIEATDFR-PVETRAPGVIDRKPVEEPLQTGLKAIDSMIPIGRGQRELIIGDRGTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           S +   ++  + D     I   +G++   V + ++          + VV AT+DE   L 
Sbjct: 176 SAIGIDTILNQKDSDVYCIYVAIGQKKSTVAQVVDVLERHGAMDYTTVVAATADEPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ E F  +G +VL++ D +++ A S RE++      P    YP  +F    
Sbjct: 236 YLAPYAGCSMGEKFMHEGKHVLVVYDDLSKHAASYRELSLLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLNDENGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLISDLFHAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K++  +L   + ++ E         +   +D    + + +
Sbjct: 356 AVDVGISVSRVGGSAQLKGMKQVSGTLRLDLAQYRELE---AFAQFGTDLDKSTQQKLAR 412

Query: 410 VPIIYDFLKQSPSDL 424
               ++ LKQ     
Sbjct: 413 GKRTFEILKQDQYQP 427


>gi|308183238|ref|YP_003927365.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori PeCan4]
 gi|308065423|gb|ADO07315.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori PeCan4]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + RE++      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|318042274|ref|ZP_07974230.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CB0101]
          Length = 505

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY K++ V   G +  I      +  L Q V  G+ V  +       G  + 
Sbjct: 11  AILKQQIADYDKSVSVSNVGTVLQIGDGIARIYGLDQ-VMAGELVQFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N LG PIDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGRGIQEGSTVKATGKIASVPVGDAMLGRVVNPLGLPIDGKGDIATSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   +E          ++VV A + ES  L+ +AP T   
Sbjct: 186 NQKGEDVVCVYVAVGQKAASVANVVEVLREKGALDYTIVVAANASESAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQQQLARGKRLREILK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|46579190|ref|YP_009998.1| F0F1 ATP synthase subunit alpha [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603236|ref|YP_967636.1| F0F1 ATP synthase subunit alpha [Desulfovibrio vulgaris DP4]
 gi|81567070|sp|Q72E02|ATPA_DESVH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158513917|sp|A1VFJ3|ATPA_DESVV RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|46448603|gb|AAS95257.1| ATP synthase, F1 alpha subunit [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563465|gb|ABM29209.1| ATP synthase F1 subcomplex alpha subunit [Desulfovibrio vulgaris
           DP4]
 gi|311233028|gb|ADP85882.1| ATP synthase F1, alpha subunit [Desulfovibrio vulgaris RCH1]
          Length = 502

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 97/448 (21%), Positives = 189/448 (42%), Gaps = 20/448 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ E+  ++        + G +  +      V  + Q     + +   G  
Sbjct: 1   MQIKAEEISKIIEEQIQSYEQRVEMSETGTVLYVGDGIARVHGV-QNAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G   +I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --LMGMVLNLEEDNVGVALLGDDTQIKEGDPVKRTGKIFSVPVGDAVMGRVLNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +    +  K P  + R+ V +   TGI+ ID  TP+  GQR  V      GK
Sbjct: 117 GLGPLDAKEFR-PVELKAPGIIARKSVHEPMPTGIKAIDAMTPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ +         +G++   V    +          + ++ AT+ E   L+
Sbjct: 176 TAVCIDAILAQKNTDIHCFYVAIGQKKATVALVADTLRKYGAMEYTTIISATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +  T+AE++ + G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FISAYSGCTMAEFYRNNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVNDSLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKAKLDR 412

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITKK 436
              + + LKQ   + + +E+    +   
Sbjct: 413 GARLVELLKQPQYEPMPTEEQVASMYAA 440


>gi|307637803|gb|ADN80253.1| ATP synthase alpha chain [Helicobacter pylori 908]
 gi|325996401|gb|ADZ51806.1| ATP synthase alpha chain [Helicobacter pylori 2018]
 gi|325997989|gb|ADZ50197.1| ATP synthase alpha subunit [Helicobacter pylori 2017]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 185/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYAGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|109947167|ref|YP_664395.1| F0F1 ATP synthase subunit alpha [Helicobacter acinonychis str.
           Sheeba]
 gi|123173495|sp|Q17Y80|ATPA_HELAH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|109714388|emb|CAJ99396.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis str.
           Sheeba]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 185/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       +  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKIYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVVV A++ +S  ++ 
Sbjct: 178 TVAIDTIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVVNASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYAGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKVCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|332295033|ref|YP_004436956.1| ATPase, FliI/YscN family [Thermodesulfobium narugense DSM 14796]
 gi|332178136|gb|AEE13825.1| ATPase, FliI/YscN family [Thermodesulfobium narugense DSM 14796]
          Length = 435

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 179/438 (40%), Positives = 252/438 (57%), Gaps = 9/438 (2%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           KNL+ L    EDY  N +   G I  I+   Y +  +   V +G+ V      S     V
Sbjct: 2   KNLKVLKDFIEDY--NYLPWNGTIDKISG--YVIESIGPKVSIGEIVYIDSGKSQIPCLV 57

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI-DGDDSLG 120
           I  + + VY+ P    E I  G +V   G+   +       G+V++ LG+P+ D      
Sbjct: 58  IGFSSNKVYLTPFDAIEGIEPGSIVKKTGKQLGLWVGKHLLGQVLDGLGRPLSDEYIQRD 117

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I +K P  + R R+ +   TGIR ID    L  GQR+G+FAGSGIGK+TLL M
Sbjct: 118 DMSQYRSIENKSPHPLKRGRIREPISTGIRAIDGLLTLGKGQRVGIFAGSGIGKTTLLGM 177

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            +R       II+LVGERGREVREF+E+    D L KSVV+V+TSD  P  R ++  TA 
Sbjct: 178 ISRFCNAQVNIIALVGERGREVREFLEESLGEDGLAKSVVIVSTSDNPPSQRVLSAFTAT 237

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAEYF   G +VL+++DS+TR   + RE+  + GE P  RGYP SVF+ + RLLER G 
Sbjct: 238 VIAEYFRDLGMDVLMVMDSLTRVCMAQRELGLSIGEPPTTRGYPPSVFTMMARLLERAGT 297

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           S+K  G+IT + +VLV+GD+  +PIAD  RSILDGHIVL+R LAE G YPP+D   SVSR
Sbjct: 298 SDK--GSITGIYTVLVEGDDLAEPIADHARSILDGHIVLSRDLAERGYYPPIDISQSVSR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L +     D   L   +  LI  ++E  D+  IG Y+ G +  +D+++ ++  I +FLKQ
Sbjct: 356 LMNSITDKDHLNLSYRIKELIASYKEAYDLINIGAYQKGSNSKIDESIEKISKIEEFLKQ 415

Query: 420 SPSDLSSEDVFQEITKKL 437
           +P D+SS D  + + +++
Sbjct: 416 TPEDISSFDDTRRLLEEI 433


>gi|269798590|ref|YP_003312490.1| ATP synthase F1 subunit alpha [Veillonella parvula DSM 2008]
 gi|269095219|gb|ACZ25210.1| ATP synthase F1, alpha subunit [Veillonella parvula DSM 2008]
          Length = 512

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 176/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  +DY  +L V   G +  +      +  L +    G+ +          G V+ 
Sbjct: 10  AIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLER-AMAGELLELP---HGVYGLVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           + LD V    +G    I  GD V   G+    P      GRV+N LG+P+DG  ++   +
Sbjct: 66  LELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLDGKGAIQATE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK+ +      
Sbjct: 126 -RRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGKTAIALDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          ++VV A++     L+ +AP   V 
Sbjct: 185 NQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQYIAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   +   G  P VD   SVS
Sbjct: 305 SPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRPAVDVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + ++ E   +     +   +D      + +   + + LK
Sbjct: 365 RVGGSAQTKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDAATRAQLDRGERLTEMLK 421

Query: 419 QSPSDLSS 426
           Q   +  S
Sbjct: 422 QGQYEPMS 429


>gi|283794953|ref|YP_003359344.1| ATPase alpha subunit [Olea europaea]
 gi|330850728|ref|YP_004376406.1| ATP synthase CF1 alpha subunit [Olea europaea subsp. europaea]
 gi|281428672|gb|ADA69911.1| ATPase alpha subunit [Olea europaea]
 gi|291059238|gb|ADD72074.1| ATP synthase CF1 alpha subunit [Olea europaea]
 gi|328795418|emb|CBR30299.1| ATP synthase CF1 alpha subunit [Olea europaea subsp. europaea]
          Length = 507

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 184/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|114804250|ref|YP_762246.1| ATP synthase CF1 alpha subunit [Morus indica]
 gi|122166820|sp|Q09X32|ATPA_MORIN RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|78100302|gb|ABB20943.1| ATP synthase CF1 alpha subunit [Morus indica]
          Length = 507

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 185/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y++ + ++  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  DIIRERIEQYNREVKILNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +           ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 246 LAEYFMYREQHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKS 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|315186386|gb|EFU20146.1| type III secretion system ATPase, FliI/YscN [Spirochaeta
           thermophila DSM 6578]
          Length = 448

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 168/426 (39%), Positives = 241/426 (56%), Gaps = 13/426 (3%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG---QVIRINLDIVYIC 73
              V   G + ++      +        +G+       +  + G   +VI +    VY+ 
Sbjct: 12  TETVKCRGRVKAVQG--MRIEGQGPLAVVGELCRIHPPDDPDAGIWAEVIGLKGSTVYLM 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
                E I +GD++   G    I  S    GRV++A G PID    L  G +   +    
Sbjct: 70  GYQDPEGIQVGDVIEAMGEPLSIRVSEGLLGRVLDARGMPIDDKGPLPPG-IRYPVQGGP 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+R+E+   TGIR +D   P+  GQR+GVF+GSG+GKSTLL M AR+   D  +I
Sbjct: 129 PHVLKRRRIEEQIATGIRALDGLLPIGKGQRVGVFSGSGVGKSTLLGMVARNTNADVNVI 188

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EFI  D   + LK+SVVVV+TSD   + R      AV IAEYF  +G +
Sbjct: 189 ALIGERGREVAEFIEHDLGEEGLKRSVVVVSTSDTPAVARYRGAFVAVAIAEYFRDQGKD 248

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L+ DS+TRFA ++REI    GE P  RGYP SVFS LP+LLER G SEK  G IT   
Sbjct: 249 VMLLFDSVTRFARALREIGLALGESPATRGYPPSVFSTLPKLLERCGTSEK--GTITGFF 306

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           SVLV+GD+ ++P++D+VR ILDGH+VL+R LA+   YP +D L+SVSRLA K  +   ++
Sbjct: 307 SVLVEGDDMDEPVSDAVRGILDGHVVLSRRLAQRQHYPAIDVLSSVSRLAPKITTPPVRE 366

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               +   +  ++ET D+  +G Y  G +  +DKA+ ++P I  FL+Q   + +      
Sbjct: 367 AARRVLRWLAAYQETEDLINVGAYARGSNPEVDKAIEKLPDINAFLRQEIEERA---PLA 423

Query: 432 EITKKL 437
           E   +L
Sbjct: 424 ETIHRL 429


>gi|297618431|ref|YP_003703590.1| ATP synthase F1 subunit alpha [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146268|gb|ADI03025.1| ATP synthase F1, alpha subunit [Syntrophothermus lipocalidus DSM
           12680]
          Length = 502

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/427 (25%), Positives = 174/427 (40%), Gaps = 16/427 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  E Y   + V   G +  +      V  L Q    G+ +   G      G V+ 
Sbjct: 10  AILKEQIERYQSEVEVSNVGTVIYVGDGIARVYGL-QNAMSGELLEFPGG---TYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD+V   GR    P      GRV+NALG+PIDG   +   +
Sbjct: 66  LEEDNVGAVLLGEYSHIKEGDIVKGTGRIMEVPAGKAMLGRVVNALGQPIDGKGPIN-TN 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   +    P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 VFRPVERVAPGVVSRKSVYQPVQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAICVDTII 184

Query: 184 SDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          ++VV AT+ E   L  +AP   V 
Sbjct: 185 NQKGQNMICIYVAIGQKQSTVASVVQKLEEYGAMDYTIVVAATASEPAPLLYLAPYAGVA 244

Query: 241 IAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           IAE F      +VL+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 245 IAEEFMETDHADVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERACK 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             ++  +G+ITA+  +     +    I  +V SI DG I L   L   G  P ++   SV
Sbjct: 305 LNEKLGEGSITALPIIETQAGDVAAYIPTNVISITDGQIYLETDLFYAGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K +   L   + ++ E   +     +   +D      +++   + + L
Sbjct: 365 SRVGGAAQIKAMKSVAGQLRLDLAQYRE---LAAFAQFGSDLDKATLARLNRGEKLQEIL 421

Query: 418 KQSPSDL 424
           KQ     
Sbjct: 422 KQGQYQP 428


>gi|330850946|ref|YP_004376696.1| ATP synthase CF1 alpha chain [Fistulifera sp. JPCC DA0580]
 gi|328835766|dbj|BAK19062.1| ATP synthase CF1 alpha chain [Fistulifera sp. JPCC DA0580]
          Length = 505

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 185/428 (43%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y +++ V   G +  +      V  L+Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIREQIEKYDQDVKVDNIGTVLQVGDGIARVYGLNQ-VMSGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   G+  +I   + + GRV+N LG  IDG   +   D
Sbjct: 67  LENDNVGVVLMGTGRQILEGSTVKSTGKIAQIPVGSEFLGRVVNPLGVAIDGKGDIKTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      
Sbjct: 127 TRL-VESMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTSIAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           +++V A++++   L+ +AP +   
Sbjct: 186 NQKTEDVVCVYVGIGQKASTVAQVVNVLEEKQAMAYTIIVSASANDPATLQYIAPYSGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYNGKATLVIYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPIIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAMKKVAGKLKLELAQFAELE---AFSQFASDLDEATQKQLARGTRLREVLK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|323137980|ref|ZP_08073054.1| ATP synthase F1, alpha subunit [Methylocystis sp. ATCC 49242]
 gi|322396699|gb|EFX99226.1| ATP synthase F1, alpha subunit [Methylocystis sp. ATCC 49242]
          Length = 510

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 98/437 (22%), Positives = 179/437 (40%), Gaps = 29/437 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  +      AE      V + G + S+      V  L   V  G+ V  +       G
Sbjct: 12  LKNEIANFGTEAE------VTEVGQVLSVGDGIARVYGL-DNVQAGETVEFENG---VRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V I   G   +I  G  V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLESDNVGIVIFGSDRDIKEGQTVKRTGAIVDVPVGKELLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K      +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 122 -KAATRARVDVKAPGIIPRKSVHEPMATGLKAVDALIPIGRGQRELIIGDRQTGKTAIAL 180

Query: 180 MFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
               +                 +   VG++   V +F++        + S++V AT+ + 
Sbjct: 181 DTILNQKSLNVEGAPESQKLYCVYVAVGQKRSTVAQFVKVLEERGALEYSIIVAATASDP 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             ++ +AP     + EYF   G + ++I D +++ A + R+++      P    YP  VF
Sbjct: 241 APMQFLAPFAGCAMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 288 SELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      ++G  ++TA+  +    ++ +  I  +V SI DG I L   L  +
Sbjct: 301 YLHSRLLERAAKLNDDRGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQ 360

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D +  +
Sbjct: 361 GIRPAVNVGLSVSRVGSSAQTKATKKVAGKIKGELAQYRE---MAAFAQFGSDLDAVTQR 417

Query: 406 AVHQVPIIYDFLKQSPS 422
            +++   + + LKQ   
Sbjct: 418 LLNRGARLTELLKQPQF 434


>gi|294792755|ref|ZP_06757902.1| ATP synthase F1, alpha subunit [Veillonella sp. 6_1_27]
 gi|294456654|gb|EFG25017.1| ATP synthase F1, alpha subunit [Veillonella sp. 6_1_27]
          Length = 512

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 180/437 (41%), Gaps = 19/437 (4%)

Query: 1   MQKNLETL----AQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E +     Q  +DY  +L V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMKPEEITAIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLER-AMAGELLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G V+ + LD V    +G    I  GD V   G+    P      GRV+N LG+P+D
Sbjct: 57  HGVYGLVLNLELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   +    I    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGAIQATE-RRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   ++          ++VV A++     L+
Sbjct: 176 TAIALDTILNQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGVAMGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     SE   G+ITA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAAKLSSELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AVDVGLSVSRVGGSAQTKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDAATRAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ   +  S
Sbjct: 413 GERLTEMLKQGQYEPMS 429


>gi|282849841|ref|ZP_06259225.1| ATP synthase F1, alpha subunit [Veillonella parvula ATCC 17745]
 gi|282580778|gb|EFB86177.1| ATP synthase F1, alpha subunit [Veillonella parvula ATCC 17745]
          Length = 512

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 180/437 (41%), Gaps = 19/437 (4%)

Query: 1   MQKNLETL----AQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E +     Q  +DY  +L V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMKPEEITAIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLER-AMAGELLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G V+ + LD V    +G    I  GD V   G+    P      GRV+N LG+P+D
Sbjct: 57  HGVYGLVLNLELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   +    I    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGAIQATE-RRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   ++          ++VV A++     L+
Sbjct: 176 TAIALDTILNQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGVAMGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     SE   G+ITA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAAKLSSELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AVDVGLSVSRVGGSAQTKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDAATRAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ   +  S
Sbjct: 413 GERLTEMLKQGQYEPMS 429


>gi|15612127|ref|NP_223779.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori J99]
 gi|9910636|sp|Q9ZK79|ATPA_HELPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|4155639|gb|AAD06627.1| ATP synthase F1, subunit alpha [Helicobacter pylori J99]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/431 (24%), Positives = 185/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       +  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKIYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYAGVAMGEYFRDHARHALIVYDDLSKHAVAYREISWILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|317177884|dbj|BAJ55673.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F16]
 gi|317182387|dbj|BAJ60171.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F57]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|221636054|ref|YP_002523930.1| flagellar protein export ATPase FliI [Thermomicrobium roseum DSM
           5159]
 gi|221157913|gb|ACM07031.1| flagellar protein export ATPase FliI [Thermomicrobium roseum DSM
           5159]
          Length = 450

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 166/443 (37%), Positives = 247/443 (55%), Gaps = 15/443 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSD 57
           ++  L+       D     + + G +  +  +  TV  +   + +GD         +   
Sbjct: 3   LETVLDRFRDRLRDLQP--IQREGRV--VRGIGLTVEAIGLDLQIGDLCHIFPSLSEEGR 58

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGD 116
              +V+  + + + + P+     +  G  V        +       GRVI+ LG+PIDG 
Sbjct: 59  LAAEVVGFHDERLILVPLAELRGVRHGSRVVRAPEALHVPVGPELLGRVIDGLGRPIDGK 118

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L +    + I    P  + R  +     TG+R ID       GQR+G+FAGSG+GKST
Sbjct: 119 GPL-RCRRRLRIGGAPPSPLQRAPIRDILPTGVRTIDALLTCGRGQRLGIFAGSGVGKST 177

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAP 235
           LL M +R+   D  +I+L+GERGREV+EFI  D     L+++VVVV+TSD+  ++R  A 
Sbjct: 178 LLGMISRNAVCDVRVIALIGERGREVQEFIERDLGPAGLEQAVVVVSTSDQPALMRIKAA 237

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            TA  IAEYF  +G +V+L++DS+TR A + RE+   +GE P  RGYP SVF+ LPRLLE
Sbjct: 238 WTATLIAEYFRDRGMSVVLMMDSVTRLAMAQREVGLAAGEPPATRGYPPSVFALLPRLLE 297

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G +E  +G+ITA  +VLV+GD+ N+PI+D+VR ILDGHIVL R+LA+ G YP +D LA
Sbjct: 298 RAGNAE--QGSITAFYTVLVEGDDLNEPISDTVRGILDGHIVLARTLADRGHYPAIDVLA 355

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSRL     + D + L S +  L+  +E  RD+  IG Y  G +  +D+A+  +P I  
Sbjct: 356 SVSRLMPSLVTPDHRALASEVRELLAAYESARDLIDIGAYVHGTNPTVDRALSLMPEIRR 415

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FL+Q P + +    F E    L+
Sbjct: 416 FLQQKPEERA---TFAETVAWLE 435


>gi|38638271|ref|NP_943682.1| ATP synthase F1 subunit alpha [Chara vulgaris]
 gi|32966585|gb|AAP92168.1| ATP synthase F1 subunit alpha [Chara vulgaris]
          Length = 516

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 101/435 (23%), Positives = 184/435 (42%), Gaps = 24/435 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V  L++ +  G+ V     +S   G  + + 
Sbjct: 16  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNK-IQAGEMVEF---SSGVKGMALNLE 71

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +LG  +  
Sbjct: 72  NESVGIVVFGSDTAIKEGDIVKRTGSIVDVPVGRSMLGRVVDALGVPIDGKGALGAVE-R 130

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSM 180
             +  K P  ++R+ V +  +TG++ +D   P+  GQR  +      GK      T+L+ 
Sbjct: 131 RRVEVKAPGIISRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQ 190

Query: 181 FARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
              +            +   +G++   V + ++        + S++V AT+ +   L+ +
Sbjct: 191 KQINAKGASEKEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASDPAPLQFL 250

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E+F   G + L+I D +++ + + R+++      P    +P  VF    RL
Sbjct: 251 APYAGCAMGEFFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRL 310

Query: 294 LERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      + G  ++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 311 LERAAKMSDQAGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAI 370

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  SL   + ++ E   +     +   +D      +++  
Sbjct: 371 NVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQYLLNRGA 427

Query: 412 IIYDFLKQSPSDLSS 426
            + + LKQ      S
Sbjct: 428 RLTEVLKQPQYSPIS 442


>gi|313183978|ref|YP_004021135.1| ATP synthase CF1 alpha subunit [Castanea mollissima]
 gi|309321505|gb|ADO65045.1| ATP synthase CF1 alpha subunit [Castanea mollissima]
          Length = 507

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQEKGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSGS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + +
Sbjct: 425 QSSPLTVE 432


>gi|294794507|ref|ZP_06759643.1| ATP synthase F1, alpha subunit [Veillonella sp. 3_1_44]
 gi|294454837|gb|EFG23210.1| ATP synthase F1, alpha subunit [Veillonella sp. 3_1_44]
          Length = 512

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 180/437 (41%), Gaps = 19/437 (4%)

Query: 1   MQKNLETL----AQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E +     Q  +DY  +L V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMKPEEITAIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLER-AMAGELLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G V+ + LD V    +G    I  GD V   G+    P      GRV+N LG+P+D
Sbjct: 57  HGVYGLVLNLELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   +    I    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGAIQATE-RRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   ++          ++VV A++     L+
Sbjct: 176 TAIALDTILNQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGVAMGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     SE   G+ITA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAAKLSSELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AVDVGLSVSRVGGSAQTKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDAATRAQLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ   +  S
Sbjct: 413 GERLTEMLKQGQYEPMS 429


>gi|114411|sp|P24459|ATPAM_PHAVU RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|169318|gb|AAB01582.1| adenosine triphosphatase [Phaseolus vulgaris]
          Length = 508

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 101/438 (23%), Positives = 176/438 (40%), Gaps = 28/438 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
               L  L E    N          G + S+      V  L++ +  G+ V      S  
Sbjct: 6   RAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGV 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
            G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  
Sbjct: 62  KGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +
Sbjct: 122 ALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 180

Query: 178 LSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
                 +                 +   +G++   V + ++     N  + S++V AT+ 
Sbjct: 181 AIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATAS 240

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  
Sbjct: 241 DPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 300

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 301 VFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELF 360

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P ++   SVSR+   A     K+   SL   + ++ E   +     +   +D   
Sbjct: 361 YRGIRPAINVGLSVSRVGSAAQLKAMKQACGSLKLELAQYRE---VAAFAQFGSDLDAAT 417

Query: 404 DKAVHQVPIIYDFLKQSP 421
              +++   + + LKQ  
Sbjct: 418 QALLNRGARLTEVLKQPQ 435


>gi|146317661|sp|Q2QDA3|ATPA_CUCSA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|74027087|gb|AAZ94637.1| ATPase alpha subunit [Cucumis sativus]
 gi|115432789|gb|ABI97402.1| ATP synthase CF1 alpha subunit [Cucumis sativus]
 gi|115498288|gb|ABI98730.1| ATP synthase CF1 alpha subunit [Cucumis sativus]
          Length = 507

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYTREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   D  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSDSR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  + R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIILRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           +++V  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVSTLQERGAMEYTIIVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRKQHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + D
Sbjct: 425 QSAPLTVD 432


>gi|18075724|emb|CAD11280.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVISY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLVLRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|81301547|ref|YP_398844.1| ATP synthase CF1 alpha subunit [Nicotiana tomentosiformis]
 gi|116237306|sp|Q33C53|ATPA_NICTO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|80750906|dbj|BAE47982.1| ATPase alpha subunit [Nicotiana tomentosiformis]
          Length = 507

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|208435031|ref|YP_002266697.1| ATP synthase F1. subunit alpha [Helicobacter pylori G27]
 gi|226739894|sp|B5Z8D2|ATPA_HELPG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|208432960|gb|ACI27831.1| ATP synthase F1. subunit alpha [Helicobacter pylori G27]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|282892281|ref|ZP_06300677.1| hypothetical protein pah_c221o011 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497872|gb|EFB40223.1| hypothetical protein pah_c221o011 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 504

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 98/429 (22%), Positives = 182/429 (42%), Gaps = 15/429 (3%)

Query: 7   TLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            +    E Y +   ++  G +  +      +  L   V + + +         LG V+ +
Sbjct: 11  VIGNEIEKYEERSELESVGRVIQVGDGIARIWGLDD-VMMSELLEFPNG---TLGMVLNL 66

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
            +D V    +G  + I   D+V    +   +       GRV+NALG+PIDG   + + + 
Sbjct: 67  AVDHVGAVLLGSEQGIKEHDVVKRTNKIISVPVGEALLGRVVNALGEPIDGKGKI-ETNH 125

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
              I ++ P  + RQ V +  +TG++ ID   P+  GQR  +      GK+TL+  ++  
Sbjct: 126 FRPIEARAPNVVERQPVNEPIQTGVKAIDAMIPIGKGQRELIIGDRQTGKTTLILDTIIN 185

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           + D     I   +G++   + + +      D +K + ++ A + +   L+ +AP   V +
Sbjct: 186 QKDKDVACIYVAIGQKNSTIAKMVAILEKHDAMKYTTIIAAPASDPAALQYIAPYAGVNM 245

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF   G + +   D +T+ A + R++A      P    YP  +F    RLLER     
Sbjct: 246 GEYFMYNGKHAICFYDDLTKHAQAYRQMALLLKRPPGREAYPGDIFYLHSRLLERSAKLN 305

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G++T +  V    ++    I  +V SI DG I L   L   G  P ++   S SR
Sbjct: 306 DELGGGSLTGIPVVETQANDVATYIPTNVISITDGQIYLESDLFYAGIRPAINVGISASR 365

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  KA +   KK+  SL   + ++ E   +     +   ++      + +   + + LKQ
Sbjct: 366 VGGKAQTKAMKKVAGSLRLDLAQYRE---LAAFAQFGAELEETTLAQLRRGERMVEILKQ 422

Query: 420 SPSDLSSED 428
              +    +
Sbjct: 423 DKFNPYPLE 431


>gi|15645748|ref|NP_207925.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori 26695]
 gi|210135293|ref|YP_002301732.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori P12]
 gi|217034725|ref|ZP_03440126.1| hypothetical protein HP9810_3g10 [Helicobacter pylori 98-10]
 gi|2493018|sp|P55987|ATPA_HELPY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739893|sp|B6JMX4|ATPA_HELP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|2314285|gb|AAD08176.1| ATP synthase F1, subunit alpha (atpA) [Helicobacter pylori 26695]
 gi|210133261|gb|ACJ08252.1| ATP synthase F1 subunit alpha [Helicobacter pylori P12]
 gi|216942808|gb|EEC22307.1| hypothetical protein HP9810_3g10 [Helicobacter pylori 98-10]
 gi|297380312|gb|ADI35199.1| ATP synthase F1, alpha subunit [Helicobacter pylori v225d]
 gi|308062410|gb|ADO04298.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Cuz20]
 gi|317178564|dbj|BAJ56352.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F30]
 gi|317180866|dbj|BAJ58652.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori F32]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|317968982|ref|ZP_07970372.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CB0205]
          Length = 505

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY K++ V   G +  +      V  L Q V  G+ +  +       G  + 
Sbjct: 11  AILKQQIADYDKSVSVSNVGTVLQVGDGIARVYGLEQ-VMAGELIQFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N LG+ IDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGRGIQEGSTVKATGKIASVPVGDAMLGRVVNPLGQAIDGKGDIPTSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   +E          +V+V A + ES  L+ +AP T   
Sbjct: 186 NQKGEDVVCVYVAVGQKAASVANVVEVLREKGALDYTVIVAANASESAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQQQLARGKRLREILK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|295311633|ref|YP_003587244.1| ATPase subunit 1 [Citrullus lanatus]
 gi|259156761|gb|ACV96623.1| ATPase subunit 1 [Citrullus lanatus]
          Length = 509

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 102/436 (23%), Positives = 178/436 (40%), Gaps = 28/436 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
             L  L E    N          G + S+      V  L + +  G+ V      S   G
Sbjct: 8   AELTTLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L
Sbjct: 64  IALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGAL 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 124 SDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 180 MFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
               +                 +   +G++   V + ++    G+ L+ S++V AT+ + 
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDP 242

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 302

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 303 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 362

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D     
Sbjct: 363 GIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQA 419

Query: 406 AVHQVPIIYDFLKQSP 421
            +++   + + LKQ  
Sbjct: 420 LLNRGARLTEVLKQPQ 435


>gi|317014520|gb|ADU81956.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Gambia94/24]
          Length = 503

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 185/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYAGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|322421877|ref|YP_004201100.1| ATP synthase F1 subunit alpha [Geobacter sp. M18]
 gi|320128264|gb|ADW15824.1| ATP synthase F1, alpha subunit [Geobacter sp. M18]
          Length = 502

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 180/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     K       V + G I SI      +  L +    G+ +   G  
Sbjct: 1   MEIKAEEISEIIRKQIKEYGTEVAVAETGTIISIGDGIARIHGLDK-AMAGELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D V    +G   EI  GD V   G+   +       GRV++A+G PID
Sbjct: 59  --ITGMVLNLEEDNVGAAILGEFSEIKEGDSVKLTGKIVEVPVGPALIGRVVDAIGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +       ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GLGPINTTSFG-KVEVKAPGIVKRKSVHQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +           ++VV AT+ E   L+
Sbjct: 176 TAVAIDTIINQKGGDVVCIYVAIGQKRSTVAQVVSKLKEHGAMDYTIVVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F   G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYTGVTMGEFFRDSGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKVSDDCGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIYLESDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQVKAMKQVAGTLRLALAQYRE---MAAFAQFGSDLDKATQMQLAR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GARLVEILKQPQ 424


>gi|139388895|ref|YP_001123622.1| ATP synthase CF1 alpha subunit [Lepidium virginicum]
 gi|190358181|sp|A4QL91|ATPA_LEPVR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286825|dbj|BAF50446.1| ATPase alpha subunit [Lepidium virginicum]
          Length = 507

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKIAASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|255280305|ref|ZP_05344860.1| ATP synthase F1, alpha subunit [Bryantella formatexigens DSM 14469]
 gi|255269396|gb|EET62601.1| ATP synthase F1, alpha subunit [Bryantella formatexigens DSM 14469]
          Length = 502

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 107/432 (24%), Positives = 180/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +D  K       V   G +  ++     +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKDEIKKYSSKMSVSNVGTVMQVSDGIARIHGL-ESAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +     IS GD V   GR   +       GRV+NALG PID
Sbjct: 58  -EVEGMVLNLEEDNVGAVLLSDATSISEGDTVKTTGRVVSVPVGDGMLGRVVNALGHPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D + EI    P  + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-PSDKTREIERVAPGVITRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++          + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVKCIYVAIGQKSSTVANIVKTLEEYGAMDYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I E +   GD+VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAIGEEWMENGDDVLIIYDDLSKHAAAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAAKLSDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+ + +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AVNAGLSVSRVGGAAQIKAMKKIAAPIRVELAQYRE---LAAFSQFGSELDADTKEKLAQ 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ+ 
Sbjct: 413 GERLKEILKQTQ 424


>gi|213406001|ref|XP_002173772.1| ATP synthase subunit alpha [Schizosaccharomyces japonicus yFS275]
 gi|212001819|gb|EEB07479.1| ATP synthase subunit alpha [Schizosaccharomyces japonicus yFS275]
          Length = 505

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 106/427 (24%), Positives = 185/427 (43%), Gaps = 22/427 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            ++   YS   + + G++ S+      V+ LS  V   + V     +S   G  + + LD
Sbjct: 11  ERIRGAYSAAQLAESGHVLSVGDGIARVSGLS-NVQAEELVEF---SSGIKGMALNLELD 66

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V     G  + +  GD+V   G    +       GRV++ LG+PIDG   L   +    
Sbjct: 67  TVGCVLFGNDKLVREGDVVKRTGSIVDVPVGPELLGRVVDVLGQPIDGKGPLNAKE-RRR 125

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R  V +  +TG++ ID   P+  GQR  +      GK       +L+   
Sbjct: 126 VQVKAPGILPRTSVCEPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIALDAILNQKR 185

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
            +D  D       +   +G++   V +F++     D LK SV+V AT+ ES  L+ +AP 
Sbjct: 186 WNDGNDESKKLYCVYVAIGQKRSTVAQFVQKLEENDALKYSVIVAATASESAPLQYLAPF 245

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +  +I E+F   G + L+  D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 246 SGCSIGEWFRDNGKHSLICYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 305

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +   G + +  I  +V SI DG + L   L  +G  P ++  
Sbjct: 306 AAKMNPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQVFLESELFFKGIRPAINVG 365

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     KK+   +   + ++ E   +     +   +D      + +   + 
Sbjct: 366 LSVSRVGSAAQVKAMKKVAGPIKLFLAQYRE---VASFAQFGSDLDPGTRATLDRGLRLT 422

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 423 ELLKQPQ 429


>gi|310778009|ref|YP_003966342.1| ATP synthase F1 subcomplex alpha subunit [Ilyobacter polytropus DSM
           2926]
 gi|309747332|gb|ADO81994.1| ATP synthase F1 subcomplex alpha subunit [Ilyobacter polytropus DSM
           2926]
          Length = 500

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 109/432 (25%), Positives = 188/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     E+Y K+L +   G +  +      +  LS     G+ +      
Sbjct: 1   MKIRPEEISSIIKTEIENYKKSLDIKTSGSVVEVGDGIARIYGLS-NAKAGELLEFPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G V+ +  + V    +G    +  GD V   G     P      GRV+NALG+PID
Sbjct: 59  --IRGMVLNLEENNVGAVLLGDPTGVKEGDEVRATGEVAAVPAGEGLLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K +  M +  K    + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGDI-KTERMMTLERKAHGIIARKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K I   +G+R   V + ++          ++VV AT+ E   L+
Sbjct: 176 TAVALDAIINQKGTGVKCIYVAIGQRRSTVAQIVKKLENAGAMEYTIVVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP   V++ EYF  KG++VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YMAPYCGVSMGEYFMDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 296 RLLERAAKLSDDLGAGSITALPIIETQAGDVSAFIPTNVISITDGQIFLDSELFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ + +   + ++ E   +     +   +D      + +
Sbjct: 356 AINAGISVSRVGGSAQIKAMKQVAAKVKLELAQYSE---LLTFAQFGSDLDKATKAQLER 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GHRIMEVLKQDQ 424


>gi|290490172|gb|ADD31493.1| ATP synthase CF1 alpha subunit protein [Ehretia acuminata]
          Length = 507

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 182/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|307155267|ref|YP_003890651.1| ATP synthase F1 subunit alpha [Cyanothece sp. PCC 7822]
 gi|306985495|gb|ADN17376.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 7822]
          Length = 503

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 99/424 (23%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L Q     + +  +      +G  + 
Sbjct: 11  SIIRQQIESYDQQVQVSNVGTVLQVGDGTARIYGL-QQAMAQELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++       GR+++ALG+P+DG   +   +
Sbjct: 67  LEEDNVGAVLMGAGYGIQEGSTVKATGKIAQVPVGEALVGRIVDALGRPVDGKGPINTSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-LESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + ++          +VVV A +++   L+ +AP T  T
Sbjct: 186 NQKSEDVICVYVAIGQKASTVAQVVDTLTEKGAMDYTVVVDANANDPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAQAYRQLSLLMRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NDQLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQAQLARGQRLREVLK 422

Query: 419 QSPS 422
           Q  +
Sbjct: 423 QPQN 426


>gi|320108424|ref|YP_004184014.1| ATP synthase F1 subunit alpha [Terriglobus saanensis SP1PR4]
 gi|319926945|gb|ADV84020.1| ATP synthase F1, alpha subunit [Terriglobus saanensis SP1PR4]
          Length = 515

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  E+Y + + V + G + S+      +  L + V  G+ +          G  + 
Sbjct: 11  ELLRQQIENYEQRVQVDEVGTVISLGDGIARIHGLDK-VMAGELIEFP---HGVAGLAMN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V    +G    IS GD V   G+   +       GRV+NALG+PID    +    
Sbjct: 67  LDEDQVGAVLLGDYTLISEGDQVKRTGKIMSVPVGDAMIGRVVNALGQPIDDKGPID-TP 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S+ I    P  + R+ V +   TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 HSLPIERLAPGVIARKSVTEPMATGIKAIDTMIPIGRGQRELLIGDRQTGKTAIALDTII 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   V + ++        K ++VV AT+ E   +  +AP  A  
Sbjct: 186 NSAKNDLICIYCAIGQKRSSVAQIVQTLEEYGAMKYTIVVAATASEPAPMNYLAPFAATA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + L+I D +++ A S REI+      P    YP  VF    RLLER    
Sbjct: 246 MGEYFRDNGKHALIIYDDLSKHAASYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKM 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 306 SDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRPAVNVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ ++L   + ++ E         +   +D    K +++   + + LK
Sbjct: 366 RVGFSAAIKATKQVGATLKLDLAQYREL---AAFAQFGSDLDPATQKQLNRGKRLTELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QKQF 426


>gi|50346767|ref|YP_053140.1| ATP synthase CF1 alpha subunit [Nymphaea alba]
 gi|75290275|sp|Q6EW63|ATPA_NYMAL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|50250312|emb|CAF28578.1| ATPase alpha subunit [Nymphaea alba]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 108/428 (25%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V         +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFAEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEILASEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRQRHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKPSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + D
Sbjct: 425 QSSPLAVD 432


>gi|316931853|ref|YP_004106835.1| ATP synthase F1 subunit alpha [Rhodopseudomonas palustris DX-1]
 gi|315599567|gb|ADU42102.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris DX-1]
          Length = 510

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 105/442 (23%), Positives = 180/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVLAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGVVIFGADREIKEGQTVKRTRSIVDAPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQAVE-RKRVDVKAPGIIPRKSVHEPMATGLKSIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   VG++   V +F++        + SVVV A
Sbjct: 176 TAIALDTILNQKPLNVEGAPESQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSVVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  TI EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYIAPFTGCTIGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      ++GN   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDDQGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 AATQRLLNRGSRLTELLKQPQF 434


>gi|114107031|ref|YP_740187.1| ATP synthase CF1 alpha subunit [Liriodendron tulipifera]
 gi|122227475|sp|Q0G9N4|ATPA_LIRTU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|113200979|gb|ABI32494.1| ATP synthase CF1 alpha subunit [Liriodendron tulipifera]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 110/434 (25%), Positives = 187/434 (43%), Gaps = 16/434 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS-DLSSEDVFQEI 433
            S  L+ ED    I
Sbjct: 425 QSTPLTVEDQIVTI 438


>gi|71909721|ref|YP_287308.1| ATP synthase F1, alpha subunit [Dechloromonas aromatica RCB]
 gi|115312243|sp|Q477Z3|ATPA_DECAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71849342|gb|AAZ48838.1| ATP synthase F1 subcomplex alpha subunit [Dechloromonas aromatica
           RCB]
          Length = 512

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL     V   G + S+T     V  L Q V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSKIQNLQGASEVRTQGTVVSVTDGICRVHGL-QDVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV+N+LG+PID
Sbjct: 58  -NTFGMALNLERDSVGAVVLGEYEHISEGDIVKTTGRILEVPVGPELLGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + RQ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTDKIEKVAPGVIWRQSVSQPVQTGLKCVDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +           ++VV A + ES  L+
Sbjct: 176 TAVAVDAIINQKGKGLFCVYVAIGQKASTIANVVRKLEEHGAMEYTIVVAAPASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF   G++ L+I D +T+ A   R+++      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDTGEDALIIYDDLTKQAWGYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSAAWVEKLSNGAIKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKLIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +  ++ + +KQ      S
Sbjct: 413 LDEATRKQLERGRLVTELMKQPQYSPMS 440


>gi|307718601|ref|YP_003874133.1| hypothetical protein STHERM_c09130 [Spirochaeta thermophila DSM
           6192]
 gi|306532326|gb|ADN01860.1| hypothetical protein STHERM_c09130 [Spirochaeta thermophila DSM
           6192]
          Length = 448

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 168/426 (39%), Positives = 240/426 (56%), Gaps = 13/426 (3%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG---QVIRINLDIVYIC 73
              V   G + ++      +        +G+       +  + G   +VI +    VY+ 
Sbjct: 12  TETVKCRGRVKAVQG--MRIEGQGPLAVVGELCRIHPPDDPDAGIWAEVIGLKGSTVYLM 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
                E I +GD++   G    I  S    GRV++A G PID    L  G +   +    
Sbjct: 70  GYRDPEGIQVGDVIEAMGEPLSIRVSEGLLGRVLDARGMPIDDKGPLPPG-IRYPVQGGP 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+R+E+   TGIR +D   P+  GQR+GVF+GSG+GKSTLL M AR+   D  +I
Sbjct: 129 PHVLKRRRIEEQIATGIRALDGLLPIGKGQRVGVFSGSGVGKSTLLGMVARNTNADVNVI 188

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV EFI  D   + LK+SVVVV+TSD   + R      AV IAEYF  +G +
Sbjct: 189 ALIGERGREVAEFIEHDLGEEGLKRSVVVVSTSDTPAVARYRGAFVAVAIAEYFRDQGKD 248

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L+ DSITRFA ++RE+    GE P  RGYP SVFS LP+LLER G SEK  G IT   
Sbjct: 249 VMLLFDSITRFARALREMGLALGESPATRGYPPSVFSTLPKLLERCGTSEK--GTITGFF 306

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           SVLV+GD+ ++P++D+VR ILDGH+VL+R LA+   YP +D L+SVSRLA K  +   + 
Sbjct: 307 SVLVEGDDMDEPVSDAVRGILDGHVVLSRRLAQRQHYPAIDVLSSVSRLAPKITTPPVRD 366

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               +   +  ++ET D+  +G Y  G +  +DKA+ ++P I  FL+Q   + +      
Sbjct: 367 AARRVMRWLAAYQETEDLINVGAYARGSNPEVDKAIEKLPDINAFLRQEIEERA---PLA 423

Query: 432 EITKKL 437
           E   +L
Sbjct: 424 ETIHRL 429


>gi|224365667|ref|YP_002608394.1| ATPase alpha subunit [Vitis vinifera]
 gi|147784163|emb|CAN68258.1| hypothetical protein VITISV_013579 [Vitis vinifera]
 gi|209954191|emb|CAQ77652.1| ATPase alpha subunit [Vitis vinifera]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + +
Sbjct: 425 QSSPLTVE 432


>gi|295311673|ref|YP_003587355.1| ATPase subunit 1 [Cucurbita pepo]
 gi|259156801|gb|ACV96662.1| ATPase subunit 1 [Cucurbita pepo]
          Length = 509

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 103/436 (23%), Positives = 181/436 (41%), Gaps = 28/436 (6%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
             L  L E    N      V + G + S+      V  L + +  G+ V      S   G
Sbjct: 8   AELTTLLESRITNFYTHLKVDEIGRVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L
Sbjct: 64  IALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGAL 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    +  K P  ++R+ V +  +TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 124 SDHE-RRRVEVKAPGIISRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 182

Query: 180 MFARSDCFD-----------KVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDES 227
               +                 +   +G++   V + ++    G+ L+ S++V AT+ + 
Sbjct: 183 DTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSSGNALEYSILVAATASDP 242

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 243 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 302

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 303 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 362

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D     
Sbjct: 363 GIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQA 419

Query: 406 AVHQVPIIYDFLKQSP 421
            +++   + + LKQ  
Sbjct: 420 LLNRGARLTEVLKQPQ 435


>gi|188527917|ref|YP_001910604.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Shi470]
 gi|226739895|sp|B2UUP2|ATPA_HELPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|188144157|gb|ACD48574.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Shi470]
          Length = 503

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|153809939|ref|ZP_01962607.1| hypothetical protein RUMOBE_00320 [Ruminococcus obeum ATCC 29174]
 gi|149834117|gb|EDM89197.1| hypothetical protein RUMOBE_00320 [Ruminococcus obeum ATCC 29174]
          Length = 509

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 183/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++     K         + G I  +       + L      G+ +  +  N
Sbjct: 1   MQLKPEEISKVIRSQIKYYENAIQQNETGTILMVGDGIARASGLV-NCMAGELLEFEDGN 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I   G  E I  G  V   G+   +       GRV+NALG+PID
Sbjct: 60  ---FGMAQNLEENSVSIVIFGSDENIGEGQTVKRTGKVVSVPVGEAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + +K P    R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPIDTKEFR-PVETKAPGICERRSVYQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+ +    +        I   +G++   V   +E+   +     ++VV AT+ ES  ++
Sbjct: 176 TTIATDTIINQKGKDVLCIYVAIGQKRSTVASLVENLTRNGAMNYTIVVAATASESSPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF ++G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFMNQGKDVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLDDEHGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGDAQIKAMKKVAGTLKLIYSQYRELQSFAQFG---SDLDADTKARLEQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQS +
Sbjct: 413 GARIVEVLKQSQN 425


>gi|108796669|ref|YP_636515.1| CF1 alpha subunit of ATP synthase [Zygnema circumcarinatum]
 gi|146322299|sp|Q32RL1|ATPA_ZYGCR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|61393653|gb|AAX45795.1| CF1 alpha subunit of ATP synthase [Zygnema circumcarinatum]
          Length = 505

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 106/430 (24%), Positives = 189/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRKQIEQYTQEVKVVNIGTVLQVGDGIARIYGLDK-VMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGAVLMGDGLTIQEGSSVKATGKIAQIPVSDGYLGRVVNALARPIDGKGDIASSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV  T++    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVNTFEERGAMDYTIVVAETANAPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           +AEYF  KG + L++ D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGQHTLVVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S+  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 GSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPSDLSSED 428
           Q+ S   S +
Sbjct: 423 QAQSAPLSVE 432


>gi|39933255|ref|NP_945531.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris CGA009]
 gi|192288606|ref|YP_001989211.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris TIE-1]
 gi|81698439|sp|Q6NDD0|ATPA_RHOPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|39652880|emb|CAE25622.1| putative H+-transporting ATP synthase alpha chain [Rhodopseudomonas
           palustris CGA009]
 gi|192282355|gb|ACE98735.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris TIE-1]
          Length = 510

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 106/442 (23%), Positives = 180/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVLAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGVVIFGADREIKEGQTVKRTRSIVDAPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQAVE-RKRVDVKAPGIIPRKSVHEPMATGLKSIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   VG++   V +F++        + SVVV A
Sbjct: 176 TAIALDTILNQKPLNVEGAPESQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSVVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  TI EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYIAPFTGCTIGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E+GN   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDEQGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 AATQRLLNRGSRLTELLKQPQF 434


>gi|289065074|ref|YP_003433960.1| ATP synthase CF1 alpha subunit [Typha latifolia]
 gi|281371757|gb|ADA63684.1| ATP synthase CF1 alpha subunit [Typha latifolia]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 186/422 (44%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E YS+ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYSREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSDAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +G + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EHFMYRGKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|27375553|ref|NP_767082.1| F0F1 ATP synthase subunit alpha [Bradyrhizobium japonicum USDA 110]
 gi|81740322|sp|Q89X72|ATPA_BRAJA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|27348690|dbj|BAC45707.1| ATP synthase alpha chain [Bradyrhizobium japonicum USDA 110]
          Length = 509

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 186/441 (42%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGVVIFGADREIKEGQTVKRTRAIVDAPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D  M +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QADKRMRVDVKAPGIIPRKSVSEPMATGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T+L+    +   D       +   VG++   V +F++        + S++V AT
Sbjct: 176 TAIALDTILNQKPLNAQPDENIKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP TA T+ E+F   G + ++I D +++ A + R+++      P    YP
Sbjct: 236 ASDPAPMQYIAPFTACTMGEFFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     K+ G+   TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKLSKDHGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D 
Sbjct: 356 LFFQGIRPAVNVGLSVSRVGSSAQTKATKKVAGKIKGELAQYRE---MAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              + +++   + + LKQ   
Sbjct: 413 STQRLLNRGSRLTELLKQPQF 433


>gi|222152002|ref|YP_002561162.1| ATP synthase alpha subunit [Macrococcus caseolyticus JCSC5402]
 gi|254808103|sp|B9E8E8|ATPA_MACCJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|222121131|dbj|BAH18466.1| ATP synthase alpha subunit [Macrococcus caseolyticus JCSC5402]
          Length = 503

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 180/439 (41%), Gaps = 15/439 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  +      V  L+  V  G+ V         LG    
Sbjct: 10  ALLKSQIENYESGMTVTDVGTVIQVGDGIALVHGLN-NVMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +  +G   +I  GD V   GR   +       GRV+N LG+PIDG   L    
Sbjct: 66  LEENNVGVVILGPFTDIKEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGRGPLNTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S     M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPIESPATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   VR  +E          ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDEDMICVYVAIGQKESTVRTAVETLRAHGALDYTIVVSASASQPAPLLYIAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  V     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDSLGGGSITALPFVETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDPATKAKLERGKRTVEVLK 421

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q  +   + D    I   L
Sbjct: 422 QDQNKPLTVDKQVTILYAL 440


>gi|290490194|gb|ADD31504.1| ATP synthase CF1 alpha subunit protein [Cornus florida]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|254520285|ref|ZP_05132341.1| ATP synthase F1 sector subunit alpha [Clostridium sp. 7_2_43FAA]
 gi|226914034|gb|EEH99235.1| ATP synthase F1 sector subunit alpha [Clostridium sp. 7_2_43FAA]
          Length = 504

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 108/423 (25%), Positives = 172/423 (40%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y K +  V  G I  I      V  L      G+ +       +  G  + 
Sbjct: 10  SIIKKEIERYEKEIKTVDSGTIIQIGDGIARVYGLDD-CMEGELLEFPN---NVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD+V    +   +       GRV+N+LG PIDG   +    
Sbjct: 66  LEQDNVGCVLLGSEEGIREGDIVKRTNKIVEVPVGEALLGRVVNSLGDPIDGKGPINNSG 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  ++R  V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 YR-PIEVPAPSIIDRSSVNEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIALDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   +        L  S+VV  T+ ES  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVANIVNTLEEFGALDYSIVVSGTASESAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHQGKDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLESDLFHSGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E       G     +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVSGTLRLELAQYRELESFAQFG---SDLDKDSKKRLEKGKRLVEVLK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QDQ 424


>gi|253582460|ref|ZP_04859682.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
 gi|251835605|gb|EES64144.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
          Length = 500

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 113/432 (26%), Positives = 192/432 (44%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     E+Y K+L +   G +  +      V  LS  +  G+ +      
Sbjct: 1   MKIRPEEVSSIIKNEIENYKKSLDIKTSGSVLEVGDGIARVYGLSSAMS-GELLEFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V    +G    I  GD V   GR    P      GRV+NALG+PID
Sbjct: 57  HGVMGMALNLEEDNVGAVILGDFSLIKEGDEVRATGRVVSVPAGESLLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K +  MEI  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGEI-KAEKYMEIERKASGIISRKPVFEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K I   +G++   V +  +          + +V AT+ E+  L+
Sbjct: 176 TAIAIDAILNQKGTGVKCIYVAIGQKRSTVAQIYKKLEDAGAMEYTTIVAATASEAAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP + V++ EYF  KG++VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YMAPYSGVSMGEYFLDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 296 RLLERAAKLSDKLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ S +   + ++ E   +     +   +D      + +
Sbjct: 356 AINAGISVSRVGGSAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKSTKAQLER 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GNRIMEVLKQPQ 424


>gi|290490178|gb|ADD31496.1| ATP synthase CF1 alpha subunit protein [Meliosma aff. cuneifolia
           Moore 333]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I     + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVGDAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|224089781|ref|XP_002195743.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit [Taeniopygia guttata]
          Length = 553

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G    I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDRLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG  ++        +  K P  + R  
Sbjct: 126 KEGDVVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGAI-ASKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|317011332|gb|ADU85079.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori SouthAfrica7]
          Length = 503

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 185/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDTIINQKGQNVICIYVAIGQKESTVAQVVRKLGEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYAGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKVCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|262400756|gb|ACY66245.1| ATP synthase CF1 alpha subunit [Brassica napus]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMDYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER     S
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ELGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|317486589|ref|ZP_07945410.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
 gi|316922189|gb|EFV43454.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
          Length = 502

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 96/426 (22%), Positives = 181/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  ++Y + +   + G + S+      V  + Q     + +   G     LG V+ 
Sbjct: 10  KIIKEQIQNYEQRVDATETGTVLSVGDGIARVYGV-QNAMSMELLEFPGG---LLGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  GD V   GR   +       GRV+N LG P+DG   +   +
Sbjct: 66  LEEDNVGVALLGEDTGIKEGDPVKRTGRIFSVPIGDAVMGRVLNPLGMPVDGLGPVEATE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            S  +  K P  + R+ V +   TGI+ ID  TP+  GQR  V      GK+ +   ++ 
Sbjct: 126 FSA-VEVKAPGIIARKSVHEPMVTGIKAIDAMTPIGRGQRELVIGDRQTGKTAICIDAIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           A+ +         +G++   V    +          + ++ AT+ E   L+ +A  +  T
Sbjct: 185 AQKNSDVHCFYVAIGQKRSTVALVADTLRKHGAMEYTTIISATASEPAPLQYIAAYSGCT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEY+ + G + L++ D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 245 MAEYYRNNGKHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKV 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG + L  +L   G  P ++   SVS
Sbjct: 305 NDSLGAGSMTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRPAINVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  ++   + ++ E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGSAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKSTKQKLERGARLVELLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPQYQP 427


>gi|194033257|ref|YP_002000594.1| ATP synthase F0 subunit 1 [Oryza sativa Japonica Group]
 gi|148886790|sp|P0C520|ATPAM_ORYSA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|148886791|sp|P0C521|ATPAM_ORYSI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|148886792|sp|P0C522|ATPAM_ORYSJ RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|60498752|dbj|BAC19899.2| ATP synthase F0 subunit 1 [Oryza sativa Japonica Group]
          Length = 509

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 177/442 (40%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 TQALLNRGARLTEVSKQPQYEP 438


>gi|69214354|gb|AAZ03785.1| ATP synthase alpha chain [Typha latifolia]
          Length = 506

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 186/422 (44%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E YS+ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYSREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSDAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +G + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EHFMYRGKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|307683411|dbj|BAJ19684.1| ATP synthase CF1 alpha chain [Pseudotsuga sinensis var. wilsoniana]
          Length = 507

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  ++  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVKATGKIAQVPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV  T+D S  L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVNTFRDRGAMEYTIVVAETADSSATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|22711895|ref|NP_683781.1| ATP synthase CF1 alpha subunit [Chaetosphaeridium globosum]
 gi|75302100|sp|Q8MA05|ATPA_CHAGL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|22416899|gb|AAM96499.1| CF1 alpha subunit of ATP synthase [Chaetosphaeridium globosum]
          Length = 512

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 191/436 (43%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + V+  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRKQIEQYNQEVRVINIGTVLQVGDGIARIYGLDK-VMSGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGAVLMGEGLSIQEGSSVKATGKIAQIPVSDGYLGRVVNALARPIDGKGDIPASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESAAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   + VI     +G++   V + +  +        +++V   ++    L+ +AP T   
Sbjct: 186 NQKGNNVICVYVAIGQKASSVAQVLNTFEERGAMDYTIIVSEPANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  KG + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEFFMYKGRHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSP-SDLSSEDVFQEI 433
           QS  S L+ ED    I
Sbjct: 423 QSQSSPLAVEDQVATI 438


>gi|261838462|gb|ACX98228.1| ATP synthase F1 alpha chain [Helicobacter pylori 51]
          Length = 503

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 187/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V H     ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKHTKSLMKVPVGDAIVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|118411112|ref|YP_874506.1| ATP synthase CF1 alpha chain [Thalassiosira pseudonana]
 gi|224015796|ref|XP_002297546.1| ATP synthase alpha chain, thylakoid ATPase, plastid protein
           [Thalassiosira pseudonana CCMP1335]
 gi|125987716|sp|A0T0P4|ATPA_THAPS RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|116739859|gb|ABK20729.1| ATP synthase CF1 alpha chain [Thalassiosira pseudonana]
 gi|220967810|gb|EED86186.1| ATP synthase alpha chain, thylakoid ATPase, plastid protein
           [Thalassiosira pseudonana CCMP1335]
          Length = 503

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 99/428 (23%), Positives = 184/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y +++ +   G +  +      V  L Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIREQIEQYDQDVKIDNIGTVLQVGDGIARVYGLDQ-VMSGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   G+  +I     + GRV+N LG PIDG   +   +
Sbjct: 67  LENDNVGVVLMGNGRQILEGGSVKSTGQIAQIPVGEAFLGRVVNPLGAPIDGKGDIASTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      
Sbjct: 127 TRL-VESMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTSIAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V A++++   L+ +AP +   
Sbjct: 186 NQKTEDVVCVYVGIGQKASTIAQVVNVLDEKEAMAYTIIVSASANDPATLQYIAPYSGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L++ D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYNGKATLIVYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPIIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDEATQKQLARGTRLREILK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|139389935|ref|YP_001123535.1| ATPase alpha subunit [Draba nemorosa]
 gi|190358173|sp|A4QL04|ATPA_DRANE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286737|dbj|BAF50359.1| ATPase alpha subunit [Draba nemorosa]
          Length = 507

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|295109101|emb|CBL23054.1| ATP synthase F1 subcomplex alpha subunit [Ruminococcus obeum
           A2-162]
          Length = 509

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 113/433 (26%), Positives = 184/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++     K         + G I  +       + L      G+ +  +  N
Sbjct: 1   MQLKPEEISKVIRSQIKYYENAIQQNETGTILMVGDGIARASGLV-NCMAGELLEFEDGN 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I   G  E I  G  V   G+   +       GRV+NALG+PID
Sbjct: 60  ---FGMAQNLEENSVSIVIFGSDENIGEGQTVKRTGKVVSVPVGEAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + +K P    R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPVDTKEFR-PVETKAPGICERRSVYQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+ +    +        I   +G++   V   +E+   +     ++VV AT+ ES  L+
Sbjct: 176 TTIATDTIINQKGKDVICIYVAIGQKRSTVASLVENLTRNGAMDYTIVVAATASESSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF +KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFMNKGKDVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLDDEHGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGDAQIKAMKKVAGTLKLIYSQYRELQSFAQFG---SDLDADTKARLEQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQS +
Sbjct: 413 GARIVEVLKQSQN 425


>gi|110816061|ref|YP_684393.1| ATP synthase F1 subunit alpha [Oltmannsiellopsis viridis]
 gi|86450272|gb|ABC96351.1| ATP synthase F1 subunit alpha [Oltmannsiellopsis viridis]
          Length = 523

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 96/435 (22%), Positives = 178/435 (40%), Gaps = 23/435 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            ++++ + K  V + G + S+      V  LS+ V  G+ +   G   +  G  + +  D
Sbjct: 30  EKISQYHLKVSVDEIGKVLSVGDGIARVNGLSK-VQAGEMLDFPG---NIKGMALNLEKD 85

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G    I  GD V   G+  +        GRV++ LG PIDG   L        
Sbjct: 86  NVGVVLFGSDSAIKEGDTVKRTGQILVTPVGLGTLGRVLDGLGNPIDGKGPLKDVTYKR- 144

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TGI+ +D   P+  GQR  +      GK+ +      +   
Sbjct: 145 VEVKAPGIIARKSVHEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDAIINQKS 204

Query: 188 DK-----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
                         +   VG++   V + ++        + +++V AT+ +   L+ +AP
Sbjct: 205 ANDAAKSESDKLFCVYVAVGQKRSTVTQLVKTLERSGALEYTIIVAATASDPAPLQFIAP 264

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T   + EY    G + L+I D +++ A + R+++      P    YP  +F    RLLE
Sbjct: 265 YTGCAMGEYMRDNGLHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDIFYAHSRLLE 324

Query: 296 RIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R          G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++ 
Sbjct: 325 RAAKLSDAMKAGSLTALPVIETMAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 384

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E   +     +   +D      +++   +
Sbjct: 385 GLSVSRVGSAAQIKAMKQVAGTLKLELAQYRE---VAAFAQFGGDLDSATQYTLNRGARL 441

Query: 414 YDFLKQSPSDLSSED 428
              LKQ      + +
Sbjct: 442 TQILKQPQFSPLTVE 456


>gi|308063919|gb|ADO05806.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Sat464]
          Length = 503

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|302035753|ref|YP_003796075.1| ATP synthase F1 subunit alpha [Candidatus Nitrospira defluvii]
 gi|300603817|emb|CBK40149.1| ATP synthase F1, alpha subunit [Candidatus Nitrospira defluvii]
          Length = 505

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 176/432 (40%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++ + ++  K       V Q G +  +      +  L      G+ +   G  
Sbjct: 1   MQIKAEEISSIIKEKIKGFDQQVDVSQTGSVIQVGDGIAKIYGL-DGAMAGEMLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V    +G    I  GD V   GR   I       GRV+NA+G+PID
Sbjct: 59  --LYGIALNLEEDNVGAVLMGDDVGIKEGDPVKRTGRIAEIPVGEALIGRVVNAIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P    RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-SQHSSRIEVVAPGVNTRQSVREPLQTGIKAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   VG++   V   ++    ++    ++VV AT+ +   ++
Sbjct: 176 TAIAVDTIINQKGLGVFCIYVAVGQKRSTVARVVKTLEENHAMEYTMVVAATASDPAPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I EYF   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 236 FLAPFSGAAIGEYFRDNGKHALIVYDDLSKHAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLGSDLFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQIKTMKQVAGTLRLDLAQYRE---MAAFSQFGSELDKATQMQLAR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GVRMVELLKQGQ 424


>gi|283955271|ref|ZP_06372771.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793185|gb|EFC31954.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 501

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 189/439 (43%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +  +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESNVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVINTNEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDTLVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          S+VV A + +S  L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYSIVVNAGASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|139390333|ref|YP_001122931.1| ATPase alpha subunit [Aethionema cordifolium]
 gi|190358228|sp|A4QJA0|ATPA_AETCO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286126|dbj|BAF49755.1| ATPase alpha subunit [Aethionema cordifolium]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 EGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|94986845|ref|YP_594778.1| F0F1 ATP synthase subunit alpha [Lawsonia intracellularis
           PHE/MN1-00]
 gi|118573480|sp|Q1MRB9|ATPA_LAWIP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|94731094|emb|CAJ54457.1| F1F0-ATPase alpha subunit [Lawsonia intracellularis PHE/MN1-00]
          Length = 506

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 93/424 (21%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  ++YS+ +   + G + S+      V  + Q V   + +   G   + LG V+ + 
Sbjct: 12  IKEQIQNYSQRIETTEVGTVLSVGDGIARVYGV-QDVMSMELLEFPG---NLLGMVLNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G    +  G  V   GR   +       GRV+N LG+P+DG   L   +  
Sbjct: 68  QDNVGVALLGDDTGVEEGSTVKRTGRIFSVPVGDAVTGRVLNPLGQPLDGLGPLNATEKK 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             +  K P  ++R+ + +   TGI+ ID  TP+  GQR  +      GK+   + ++ A+
Sbjct: 128 -PVEVKAPSIIDRKSIYEPLVTGIKAIDAMTPIGRGQRELIIGDRQTGKTSICIDAILAQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
            +         +G++   V    +          + ++ AT+ +   L+ ++P +  T+A
Sbjct: 187 KESGVHCFYVAIGQKASTVALVADTLRKHGAMEYTTIIAATASDPAPLQYISPYSGCTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EY+   G + L++ D +++ A + R+++      P    +P  VF    RLLER      
Sbjct: 247 EYYRDHGQHALIVYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G++TA+  +     + +  I  +V SI DG + L  +L   G  P ++   SVSR+
Sbjct: 307 ELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGVRPAINVGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   K++  ++   + ++ E   +     +   +D      + +   + + LKQ 
Sbjct: 367 GGAAQTKAMKQVSGTMRLDLAQYRE---LAAFAQFSSDLDKETQTKLERGARLVELLKQP 423

Query: 421 PSDL 424
               
Sbjct: 424 QYQP 427


>gi|139389249|ref|YP_001123015.1| ATPase alpha subunit [Aethionema grandiflorum]
 gi|190358229|sp|A4QJI4|ATPA_AETGR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286211|dbj|BAF49839.1| ATPase alpha subunit [Aethionema grandiflorum]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|218887914|ref|YP_002437235.1| F0F1 ATP synthase subunit alpha [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226739872|sp|B8DRD0|ATPA_DESVM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218758868|gb|ACL09767.1| ATP synthase F1, alpha subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 502

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 186/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ E+  ++        + G + S+      V  + +     + +   G  
Sbjct: 1   MQIKAEEISKIIEEQIQSYEQRVEMSETGTVLSVGDGIARVYGV-RNAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --LMGMVLNLEEDNVGVALLGEDTGIKEGDPVKRTGKIFSVPVGDEVMGRVLNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +    +  K P  + R+ V +   TGI+ ID  TP+  GQR  +      GK
Sbjct: 117 GLGPLEAKEFR-PVELKAPGIIARKSVHQPMPTGIKAIDAMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ D   +     +G++   V    +          + ++ AT+ E   L+
Sbjct: 176 TAVCIDAILAQRDTGIRCFYVAIGQKKATVALVADTLRKHGAMEYTTIISATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +  T+AE++  KGD+ L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FISAYSGCTMAEFYRDKGDHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVNDSLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E   +     +   +D    + + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKQKLDR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GARLVELLKQPQYQP 427


>gi|139389627|ref|YP_001123184.1| ATPase alpha subunit [Arabis hirsuta]
 gi|190358232|sp|A4QK03|ATPA_ARAHI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286382|dbj|BAF50008.1| ATPase alpha subunit [Arabis hirsuta]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|254292527|ref|YP_003058550.1| ATP synthase F1 subunit alpha [Hirschia baltica ATCC 49814]
 gi|254041058|gb|ACT57853.1| ATP synthase F1, alpha subunit [Hirschia baltica ATCC 49814]
          Length = 510

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 180/438 (41%), Gaps = 22/438 (5%)

Query: 6   ETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L     +Y ++  V   G + S+      +  L   V  G+ V  +   S   G  + 
Sbjct: 10  EILKAQITNYGAEATVSDVGQVLSVGDGIARIYGL-DNVQAGEMVQFE---SGVKGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G    I  G+ V                GRV+NALG+PIDG   L   +
Sbjct: 66  LESDNVGVVIFGDDRGIKEGENVKRLEEIVSAPVGKGMLGRVVNALGEPIDGKGELEGVE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  K P  + R+ V +   TGI+ ID   P+  GQR  +      GK       +L
Sbjct: 126 TRSRVDVKAPGILPRKSVHEPMATGIKAIDTLVPIGRGQRELIIGDRQTGKTAIAIDAIL 185

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A ++          I   +G++   V + ++          ++VV AT+ E   L+ 
Sbjct: 186 NQKAINETGSESEKLYCIYVAIGQKRSTVAQVVKTLEERGALDYTIVVSATASEPAPLQY 245

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP TA  + EYF   G + L+I D +++ A + R+++      P    YP  VF    R
Sbjct: 246 IAPFTATAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 305

Query: 293 LLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +  G+   TA+  +   G++ +  I  +V SI DG I L   L  +G  P 
Sbjct: 306 LLERSAKLNENNGSGSLTALPIIETQGNDVSAFIPTNVISITDGQIFLETDLFYQGIRPA 365

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     K++  ++   + +F E   +     +   +D    + + + 
Sbjct: 366 VNVGLSVSRVGSSAQYKATKQVAGTMKSDLAQFRE---MAAFAKFGSDLDPATQRQLARG 422

Query: 411 PIIYDFLKQSPSDLSSED 428
             +   LKQ      S +
Sbjct: 423 ERLTALLKQPQYSPLSLE 440


>gi|167648695|ref|YP_001686358.1| F0F1 ATP synthase subunit alpha [Caulobacter sp. K31]
 gi|189081291|sp|B0T338|ATPA_CAUSK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167351125|gb|ABZ73860.1| ATP synthase F1, alpha subunit [Caulobacter sp. K31]
          Length = 510

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 101/427 (23%), Positives = 180/427 (42%), Gaps = 21/427 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+A    +  V   G + S+      +  L   V  G+ V          G  + +  D
Sbjct: 14  SQIANFGEEAAVSDVGQVLSVGDGIARIYGL-DNVQAGEMVEFPKAG--VKGMALNLERD 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V     G  + I  GD V   G    +       GRV+N LG+PIDG   +   +    
Sbjct: 71  NVGAVIFGQDQAIKEGDEVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKGPIVSTE-RRR 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK      T+L+  A
Sbjct: 130 VDVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVAIDTILNQKA 189

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            +   D       +   +G++   V + ++        + ++VVVA++ E   L+ +AP 
Sbjct: 190 ANAGTDESAKLYCVYVAIGQKRSTVAQIVKTLEEHGALEYTIVVVASASEPAPLQYLAPF 249

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +   + E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 250 SGCAMGEWFRDNGLHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 309

Query: 297 IGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++ G+   TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+  
Sbjct: 310 AAKLNEDNGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFYQGIRPAVNVG 369

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  ++   + ++ E   +     +   +D    K + +   + 
Sbjct: 370 ISVSRVGSSAQIKAMKQVAGAIKGELAQYRE---MAAFAKFGSDLDASTQKLLARGERLT 426

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 427 ELLKQPQ 433


>gi|119368484|ref|YP_913172.1| ATP synthase alpha subunit [Gossypium barbadense]
 gi|125987713|sp|A0ZZ20|ATPA_GOSBA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|119224846|dbj|BAF41232.1| ATP synthase alpha subunit [Gossypium barbadense]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 187/422 (44%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGWGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +F     GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIFGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|326433589|gb|EGD79159.1| ATP synthase subunit alpha isoform [Salpingoeca sp. ATCC 50818]
          Length = 535

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 112/435 (25%), Positives = 191/435 (43%), Gaps = 22/435 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            ++  + S+  + + G + SI      V  L + V   + V     +S   G  + +  D
Sbjct: 37  ERILNESSQPELEETGRVLSIGDGIARVYGL-KNVQAEEMVEF---SSGLQGMALNLEPD 92

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G  + I  GD+V   G     P      GRV++ALG PIDG   L        
Sbjct: 93  NVGVVVFGNDKLIREGDVVKRTGAIVDVPIGEALLGRVVDALGNPIDGQGPLPSDMARSR 152

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-----LLSMFA 182
           +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK+      +++   
Sbjct: 153 VGIKAPGIIPRQSVCEPMQTGIKAVDSLVPVGRGQRELIIGDRQTGKTAVAIDSIINQKR 212

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
            +D  D       I   VG++   V + +E   G D LK S+++ AT+ ++  L+ +AP 
Sbjct: 213 FNDGTDESKKLYCIYVAVGQKRSTVAQLVERLRGADALKYSIIISATASDAAPLQYLAPY 272

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T  T+ EYF     + LLI D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 273 TGATMGEYFRDNKKHALLIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 332

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++  
Sbjct: 333 AAKMSNEAGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVG 392

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   K++   +   + ++ E   +     +   +D    + +++   + 
Sbjct: 393 LSVSRVGSAAQTKAMKQVAGKMKLELAQYRE---VAAFAQFGSDLDAATQRLLNRGIRLT 449

Query: 415 DFLKQSPS-DLSSED 428
           + LKQ     +S ED
Sbjct: 450 ELLKQGQYVPMSFED 464


>gi|115391887|ref|YP_778475.1| ATP synthase CF1 alpha subunit [Jasminum nudiflorum]
 gi|122164988|sp|Q06RE6|ATPA_JASNU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|110456208|gb|ABG74613.1| ATPase alpha subunit [Jasminum nudiflorum]
          Length = 504

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 108/423 (25%), Positives = 185/423 (43%), Gaps = 15/423 (3%)

Query: 7   TLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           TL +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + +
Sbjct: 12  TLRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNL 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   + 
Sbjct: 68  ESTNVGVVLMGDGLMIEEGSSVKATGRIAQIPVSEAYLGRVLNALAKPIDGRGEISASES 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +
Sbjct: 128 RL-IESPAPGIISRRSVYEPLQTGLVAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILN 186

Query: 185 DCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTI 241
                VI     +G++   V + +           ++VV   +D    L+ +AP T   +
Sbjct: 187 QQGQNVICVYVAIGQKASSVAQVVTTLQEGGAMEYTIVVAEMADSPATLQYLAPYTGAAL 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S 
Sbjct: 247 AEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSN 306

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR
Sbjct: 307 SSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A +   K++   L   + +F E         +   +D      + +   + + LKQ
Sbjct: 367 VGSAAQTKAMKQVAGKLKLELAQFTELE---AFAQFASDLDKATQSQLARGRRLRELLKQ 423

Query: 420 SPS 422
           S S
Sbjct: 424 SQS 426


>gi|108563497|ref|YP_627813.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori HPAG1]
 gi|118573478|sp|Q1CSD3|ATPA_HELPH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|107837270|gb|ABF85139.1| ATP synthase F1, subunit alpha [Helicobacter pylori HPAG1]
          Length = 503

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKNLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|323148891|ref|YP_004222446.1| ATP synthase CF1 alpha subunit [Smilax china]
 gi|308742582|gb|ADO33433.1| ATP synthase CF1 alpha subunit [Smilax china]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 184/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV   +D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAEAADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKKVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            +D    +
Sbjct: 425 QADPLPVE 432


>gi|290490168|gb|ADD31491.1| ATP synthase CF1 alpha subunit protein [Aucuba japonica]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 182/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEAADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|156598584|gb|ABU85549.1| ATP synthase CF1 alpha subunit [Passiflora biflora]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 186/426 (43%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIEQYNREVQIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G +I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLKIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGIISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQEKGAMEYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D   SVSR+
Sbjct: 308 HLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIDVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F+E         +   ++      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFKELE---AFAQFASDLEKATQNQLARGRRLRELLKQS 424

Query: 421 PSDLSS 426
            S   +
Sbjct: 425 QSSPLT 430


>gi|67920483|ref|ZP_00514003.1| ATP synthase F1, alpha subunit [Crocosphaera watsonii WH 8501]
 gi|67857967|gb|EAM53206.1| ATP synthase F1, alpha subunit [Crocosphaera watsonii WH 8501]
          Length = 503

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 100/424 (23%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L Q    G+ +  +      +G  + 
Sbjct: 11  SIIRQQIESYDQTVTVSNVGTVLQVGDGTARIYGLEQ-CMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++       GRV+++LG+PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGTGFGIQEGSTVKATGKIAQVPIGEAMIGRVVDSLGRPIDGKGDIATTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESPAPGIIARKSVCEPMQTGITAIDAMIPIGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + I           ++VV A +++   L+ +AP T  T
Sbjct: 186 NQKTEDVICVYVAIGQKASTVAQVIGTLEEKGAMDYTIVVAANANDPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYNGKATLVIYDDLSKQAQAYRQLSLLLKRPPGREAYPGDVFYIHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGAGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   +   LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQAQLARGQRLRQILK 422

Query: 419 QSPS 422
           Q  +
Sbjct: 423 QPEN 426


>gi|313183946|ref|YP_004021800.1| ATP synthase CF1 alpha subunit [Equisetum arvense]
 gi|281371666|gb|ADA63599.1| ATP synthase CF1 alpha subunit [Equisetum arvense]
          Length = 508

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 104/430 (24%), Positives = 188/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E YS+ + ++  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 13  SIIRKQIECYSQEIRILNIGIVLQVGDGIARIYGLDK-VMAGELVTFEDG---TVGIALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 69  LESDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDSYLGRVVNALAQPIDGKGPIPASE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 129 YRL-IESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIL 187

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     V+     +G++   V + +  +        +++V   ++    L+ +AP T   
Sbjct: 188 NQKGQNVVCVYVAIGQKASSVAQVVNTFQERGAMEYTIIVAEAANSPATLQYLAPYTGAA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 248 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            SE  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 308 SSELGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 368 RVGSAAQIKAMKQVSGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLRELLK 424

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 425 QSQSAPLSVE 434


>gi|257470709|ref|ZP_05634799.1| F0F1 ATP synthase subunit alpha [Fusobacterium ulcerans ATCC 49185]
 gi|317064914|ref|ZP_07929399.1| ATP synthase F1 sector subunit alpha [Fusobacterium ulcerans ATCC
           49185]
 gi|313690590|gb|EFS27425.1| ATP synthase F1 sector subunit alpha [Fusobacterium ulcerans ATCC
           49185]
          Length = 500

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 113/432 (26%), Positives = 192/432 (44%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     E+Y K+L +   G +  +      V  LS  +  G+ +      
Sbjct: 1   MKIRPEEVSSIIKNEIENYKKSLDIKTSGSVLEVGDGIARVYGLSSAMS-GELLEFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V    +G    I  GD V   GR    P      GRV+NALG+PID
Sbjct: 57  HGVMGMALNLEEDNVGAVILGDFSLIKEGDEVRATGRVVSVPAGESLLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K +  MEI  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGEI-KAEKYMEIERKASGIISRKPVFEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K I   +G++   V +  +          + +V AT+ E+  L+
Sbjct: 176 TAIAIDAILNQKGTGVKCIYVAIGQKRSTVAQIYKKLEDAGAMEYTTIVAATASEAAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP + V++ EYF  KG++VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YMAPYSGVSMGEYFLDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 296 RLLERAAKLSDKLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ S +   + ++ E   +     +   +D      + +
Sbjct: 356 AINAGISVSRVGGSAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKSTKAQLER 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GNRIMEVLKQPQ 424


>gi|28261702|ref|NP_783217.1| ATP synthase CF1 alpha subunit [Atropa belladonna]
 gi|75303629|sp|Q8S8Y3|ATPA_ATRBE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|20068316|emb|CAC88029.1| ATPase alpha subunit [Atropa belladonna]
          Length = 507

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T  ++A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGASLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|124026554|ref|YP_001015669.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str.
           NATL1A]
 gi|158512745|sp|A2C4J5|ATPA_PROM1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123961622|gb|ABM76405.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str.
           NATL1A]
          Length = 504

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 177/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY K++ V   G +  I      V  L + V  G+ V  +       G  + 
Sbjct: 11  SILKQQIADYDKSVSVSNVGTVLQIGDGIARVYGLEK-VMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    +  G  V   G+   +       GRV+N LG+ IDG   +   D
Sbjct: 67  LEDDNVGVVLMGEALGVQEGSTVKATGKIASVPVGEAMLGRVVNPLGQQIDGKGEIATTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESIAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   +E          +++V A + E+  L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAVGQKQASVANVVEVLKEKGALDYTIIVNAGASEAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++           YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPLGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               G  ++T++  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGAGSMTSLPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQKQLGRGKRLRELLK 422

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 423 QPQFDP 428


>gi|108762697|ref|YP_630662.1| FliI/YscN family ATPase [Myxococcus xanthus DK 1622]
 gi|108466577|gb|ABF91762.1| ATPase, FliI/YscN family [Myxococcus xanthus DK 1622]
          Length = 437

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 172/440 (39%), Positives = 248/440 (56%), Gaps = 12/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           M  +L     L ++    +V   G ++ +T +    +     V +G+ V+ + +N     
Sbjct: 1   MAIDLSRYFDLIKEAQ--VVRVRGRVTELTGLIIKASV--PNVRVGELVLIKSRNRGAVK 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D V + P+G    I     V   G+   I       GRV+N +G+P+DG   
Sbjct: 57  AEVVGFQGDEVMLMPLGELHGIGPDSEVIPTGKPLSIKCGEALLGRVLNGIGEPMDGHPL 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +G +   +    P    RQR+E+    G+R ID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 117 PEEGLIDWSVDRDCPDPFTRQRIERPLPLGVRCIDGLLTVGEGQRVGLFAGSGVGKSTLM 176

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLT 237
              AR+   D  +++L+GERGREVREFIED    + +K+SV+V ATSD+  ++R  A   
Sbjct: 177 GQIARNTKADLCVVALIGERGREVREFIEDAMGEEGMKRSVLVCATSDQPSLVRLRAAYV 236

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G NVL +LD++TR A + REI    GE P  +GYP SVFS LPR+LER 
Sbjct: 237 ATAIAEYFRERGGNVLFMLDTVTRLARAQREIGLAVGEPPARQGYPPSVFSMLPRILERT 296

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G SEK  G  TA+ + LV G +  +PIAD VR ILDGH +LNR+L E  ++P +D LAS+
Sbjct: 297 GNSEK--GKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILNRALGERNQWPAMDVLASL 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+     S D KK    L  L+  +E+ RD+ L+G Y+ G D   D+A+ +   I DFL
Sbjct: 355 SRVMSGIVSKDHKKAAGRLRELLSTYEKQRDLILLGAYQYGTDPRTDQAIDKYDAIIDFL 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           KQ   D  S   F+E  ++L
Sbjct: 415 KQ---DTHSNSGFEETVEQL 431


>gi|166367757|ref|YP_001660030.1| F0F1 ATP synthase subunit alpha [Microcystis aeruginosa NIES-843]
 gi|226739912|sp|B0JWV1|ATPA_MICAN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166090130|dbj|BAG04838.1| ATP synthase CF1 alpha chain [Microcystis aeruginosa NIES-843]
          Length = 502

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 181/426 (42%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y++ + V   G +  +      +  L Q +  G+ +  +      +G  + + 
Sbjct: 13  IRQQIESYNQEVQVSNVGTVLQVGDGTARIYGLQQAMS-GELLEFEDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G  I  G  V   G+  ++       GRV++ALG+PIDG   +   +  
Sbjct: 69  EDNVGAVLMGDGFGIKEGGTVKATGKIAQVPVGDALVGRVVDALGRPIDGKGEILASETR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      + 
Sbjct: 129 L-VESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTAIAIDTIINQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + I+          +VVV A +++   L+ +AP T  +IA
Sbjct: 188 KSEDVICVYVAIGQKASTVAQVIDTLTQRGAMDYTVVVAANANDPATLQYIAPYTGASIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYKGKATLVIYDDLTKQAQAYRQLSLLMRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSTDLFNAGFRPAINAGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+   L   + +F+E         +   +D      + +   +   LKQ 
Sbjct: 368 GSAAQTKAMKKVAGKLKLELAQFDELE---AFAQFASDLDAATQAQLARGQRLRQILKQP 424

Query: 421 PSDLSS 426
            +   S
Sbjct: 425 QNFPLS 430


>gi|296446171|ref|ZP_06888119.1| ATP synthase F1, alpha subunit [Methylosinus trichosporium OB3b]
 gi|296256365|gb|EFH03444.1| ATP synthase F1, alpha subunit [Methylosinus trichosporium OB3b]
          Length = 509

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 100/436 (22%), Positives = 183/436 (41%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  +      AE      V + G + S+      V  L   V  G+ V  +       G
Sbjct: 12  LKNEIANFGNEAE------VTEVGQVLSVGDGIARVYGL-DNVQAGEMVQFENG---VTG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G   +I  G  V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLESDNVGVVIFGSDRDIKEGQTVKRTGAIVDVPVGKGLLGRVVDALGNPIDGKGPV 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK     
Sbjct: 122 FY-ESRSRVDVKAPGIIPRKSVHEPMATGLKAIDALIPIGRGQRELIIGDRQTGKTAVAL 180

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  + +D  D       +   VG++   V +F++          S+V+ AT+ +  
Sbjct: 181 DTILNQKSLNDGDDEKAKLYCVYVAVGQKRSTVAQFVKVLEERGALDYSIVIAATASDPA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP     + EYF   G + +++ D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQFLAPFAGCAMGEYFRDNGLHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      ++G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKLNDDRGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D +  + 
Sbjct: 361 VRPAVNVGLSVSRVGSAAQTKATKKVAGKIKGELAQYRE---MAAFAQFGSDLDAVTQRL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQ   
Sbjct: 418 LNRGARLTELLKQPQF 433


>gi|290490210|gb|ADD31512.1| ATP synthase CF1 alpha subunit protein [Quercus nigra]
          Length = 507

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVVNTGTVLQVGDGIARIYGLDE-VMSGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQEKGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSGS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + +
Sbjct: 425 QSSPLTVE 432


>gi|220905448|ref|YP_002480760.1| F0F1 ATP synthase subunit alpha [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254807692|sp|B8J437|ATPA_DESDA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219869747|gb|ACL50082.1| ATP synthase F1, alpha subunit [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 502

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 95/435 (21%), Positives = 183/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ ED  +N        + G +  +      V  +   + + + +   G  
Sbjct: 1   MQIKAEEISKIIEDQIQNYEQRVEMSETGTVLYVGDGIARVYGVQNAMSM-ELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --IMGMVLNLEEDNVGVALLGSDVGIKEGDPVKRTGKIFSVPVGDGVMGRVLNPLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++   +  K P  + R+ V +   TG++ ID  TP+  GQR  +      GK
Sbjct: 117 GLGPIDAAEVR-PVEIKAPGIIARKSVHEPMPTGLKAIDAMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++ A+ +         +G++   V    +        + + ++ AT+ +   L+
Sbjct: 176 TAVCLDAILAQKETGIHCFYVAIGQKKSSVALVADTLRRHGALEYTTIISATASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A  T  T+AEY+   G + L+I D +++ A + R+++      P    +P  VF    
Sbjct: 236 YIAAYTGCTMAEYYRDSGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVNDSLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E         +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYREL---AAFAQFGSDLDKGTKAKLDR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GARLVELLKQPQYQP 427


>gi|168333942|ref|ZP_02692174.1| ATP synthase F1, alpha subunit [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 505

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 108/435 (24%), Positives = 176/435 (40%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +    N      V + G +  +      V  L Q    G+ +   G  
Sbjct: 1   MNLKPEEISSVIKAQINNYKAQLEVKEVGTVMQVGDGIARVHGL-QNAKAGELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G V+ +  D + +  +G  + I  GD+V   G    +       GRV+NALG+PID
Sbjct: 59  --VKGMVLNLEEDNIGVVLLGSDKNIKEGDVVQSTGNVASVPVGDAMLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  +       M+R+ V+   +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTTHTRPVEKVASGVMSRKSVDTPLQTGEKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   +           + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVNCIYVAIGQKASTVANIVSTLEKHGAMAYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VTIAE +   G + L+I D +++ A + R +A      P    YP  VF    
Sbjct: 236 YIAPYAGVTIAEEWMDAGKDNLIIYDDLSKHAVAYRTMALLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA   +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDELGGGSITAXPIIETQAGDISAYIPTNVISITDGQIFLESELFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     K++   +   + ++   R +     +   +D     A+ Q
Sbjct: 356 AVNPGLSVSRVGGAAQIKAMKQIAGPIRVELAQY---RSLAAFAQFGSDLDTATQNALTQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ   + 
Sbjct: 413 GERIMEVLKQGQYEP 427


>gi|9408184|emb|CAB99314.1| F0-F1 ATPase alpha subunit [Sorghum bicolor]
 gi|9408186|emb|CAB99315.1| F0-F1 ATPase alpha subunit [Sorghum bicolor]
          Length = 441

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 99/431 (22%), Positives = 181/431 (41%), Gaps = 23/431 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +++   Y+   V + G + S+      V  L++ +  G+ V      S   G  + +  +
Sbjct: 5   SRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENE 60

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L   +    
Sbjct: 61  NVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRR 119

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 120 VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQ 179

Query: 188 D-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     N  + S++V AT+ +   L+ +AP
Sbjct: 180 MNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 240 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 300 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  SL   + ++ E   +     +   +D      +++   +
Sbjct: 360 GLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARL 416

Query: 414 YDFLKQSPSDL 424
            + LKQ   + 
Sbjct: 417 TEVLKQPQYEP 427


>gi|327195227|ref|YP_004339009.1| ATP synthase F1 subunit alpha [Coccomyxa sp. C-169]
 gi|325070723|gb|ADY75451.1| ATP synthase F1 subunit alpha [Coccomyxa sp. C-169]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 190/442 (42%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAE-----DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  +L  ++ L E      YSK  + + G + SI      V  L++ +  G+ V  +   
Sbjct: 1   MALHLSEMSTLLEQKILKSYSKLNIDEIGRVLSIGDGIARVYGLNK-IQAGEMVEFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +  D V +   G    I  GD+V   G    +       GRV++ALG+PID
Sbjct: 57  SGVKGMALNLESDNVGVVLFGSDTAIQEGDIVKRTGAIVDVPVGKGTLGRVVDALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L        +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPLTDVK-RQRVEVKAPGIIARKSVSEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                 T+L+  A +   +        +   VG++   V + ++    +   + S++V A
Sbjct: 176 TAIAIDTILNQRAVNSGENGSGQKLYCVYVAVGQKRSTVAQLVKILEREGALQYSIIVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ + + R+++      P    +
Sbjct: 236 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAF 295

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKMSDKLGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D
Sbjct: 356 ELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGTLKLELAQYRE---VAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
                 +++   + + LKQ   
Sbjct: 413 AATQYLLNRGARLTEMLKQPQF 434


>gi|150015306|ref|YP_001307560.1| F0F1 ATP synthase subunit alpha [Clostridium beijerinckii NCIMB
           8052]
 gi|189081292|sp|A6LQH4|ATPA_CLOB8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149901771|gb|ABR32604.1| ATP synthase F1, alpha subunit [Clostridium beijerinckii NCIMB
           8052]
          Length = 504

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 112/423 (26%), Positives = 175/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y K++  V  G I  I      V  L      G+ +       +  G V+ 
Sbjct: 10  SIIKKEIEKYEKDIKTVDSGTIIQIGDGVSRVYGL-DNCMQGELLEFPN---NVYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  GD V   GR   +       GRV+NALG+PIDG   +    
Sbjct: 66  LEQDNVGCVLLGEEKGIKEGDTVKGTGRVVEVPVGEAMIGRVVNALGEPIDGKGPISTS- 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I       ++R  V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 QTRAIEIPAAGIIDRSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V               S+VV AT+ ES  L+ MAP +  T
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIFNTLTEMGAMDYSIVVSATASESAPLQYMAPYSGCT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMHQGKDVLIIYDDLSKHATAYRAMSLLLKRPPGREAYPGDVFYIHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G+ITA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SKELGGGSITALPIIETQAGDVTAYIPTNVISITDGQIFLESDLFNAGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E         +   +D    + + +   + + LK
Sbjct: 365 RVGGSAQIKAMKQVSGTLRLELAQYRELE---AFSQFGSDLDADSSRRLEKGKRLVEVLK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QDQ 424


>gi|317121016|ref|YP_004101019.1| ATP synthase F1 subcomplex subunit alpha [Thermaerobacter
           marianensis DSM 12885]
 gi|315590996|gb|ADU50292.1| ATP synthase F1 subcomplex alpha subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 521

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 108/436 (24%), Positives = 174/436 (39%), Gaps = 19/436 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  +     +N   +      G +  I     TV  L + V   + V      
Sbjct: 1   MSIRPEEITAIIRQQIENFEGRAELEDVGTVIQIADGVATVYGLEK-VMASELVEFPKSG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V +  +G   +I  GD V   GR   +       GRV+N LG+PID
Sbjct: 60  --VYGMALNLAEDSVGVVVLGPYTDIKEGDEVRRTGRIIEVPVGPELLGRVVNPLGQPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++     +  I S  P  + RQ V +  +TG + ID   P+  GQR  +      GK
Sbjct: 118 GGPAINAT-RTRPIESPAPGVIMRQSVNQPLQTGWKAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L      +  D     +   +G++   V   +E          ++VV AT+ +   L 
Sbjct: 177 TALAVDTIINQKDQNVICVYVAIGQKASTVAGVVETLKKYGAMDYTIVVSATASQPAPLL 236

Query: 232 KMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
            +AP     + EYF  +   +VL+I D +T+ A + RE+A      P    YP  VF   
Sbjct: 237 YIAPYAGCAMGEYFMYEEHRDVLVIYDDLTKQAWAYRELALLLRRPPGREAYPGDVFYLH 296

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 297 SRLLERAARLSDEVGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLESDLFYSGIR 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D   SVSR+   A     K++   L   + ++ E   +     +   +D      + 
Sbjct: 357 PAIDVGRSVSRVGSAAQIKAMKQVAGRLRLDLAQYRE---LAAFAQFGSDLDKATQARLA 413

Query: 409 QVPIIYDFLKQSPSDL 424
           +   + + LKQ   + 
Sbjct: 414 RGQRVTEILKQGEHEP 429


>gi|124302890|ref|YP_001023685.1| ATP synthase CF1 alpha subunit [Angiopteris evecta]
 gi|190358231|sp|A2T317|ATPA_ANGEV RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|110628288|gb|ABG79584.1| ATP synthase CF1 alpha subunit [Angiopteris evecta]
          Length = 508

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            ++ +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 13  SSIRKEIEGYTQEVKVVNVGTVLQVGDGIARIYGLDK-VMAGELVEFEDG---TVGIALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
              D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 69  SESDNVGAVLMGDGLTIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGKGQIPASE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 129 -SRPIESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 187

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV   ++    L+ +AP T   
Sbjct: 188 NQKGQNVICVYVAIGQKASSVAQVVNTFEERGAMEYTIVVAEAANSPATLQYLAPYTGAA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 248 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKS 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA   V     + +  I  +V SI DG I L+      G  P ++   SVS
Sbjct: 308 SSQLGEGSMTASPIVETQAGDVSAYIPTNVISITDGQIFLSADSFNAGIRPAINVGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 368 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 424

Query: 419 QSPS 422
           QS S
Sbjct: 425 QSQS 428


>gi|197294119|ref|YP_002149740.1| ATP synthase CF1 alpha subunit [Cicer arietinum]
 gi|197089807|gb|ACH41077.1| ATP synthase CF1 alpha subunit [Cicer arietinum]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISSSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +           +++V  T++    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|172039401|ref|YP_001805902.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. ATCC 51142]
 gi|171700855|gb|ACB53836.1| ATP synthase F1, alpha subunit [Cyanothece sp. ATCC 51142]
          Length = 503

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 99/424 (23%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y +++ V   G +  +      +  L Q    G+ +  +      +G  + 
Sbjct: 11  SIIREQIESYDQSVQVSNVGTVLQVGDGTARIYGLEQ-CMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++       GRV+++LG+PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGTGFGIQEGSSVQATGKIAQVPVGDAMIGRVVDSLGRPIDGKGDINTSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESPAPGIIARKSVCEPMQTGITAIDAMIPIGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + I           ++VV A +++   L+ +AP T  T
Sbjct: 186 NQKSEDVICVYVAIGQKASTVAQVIGTLEEKGAMDYTIVVAANANDPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYNGKATLVIYDDLSKQAQAYRQLSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   +   LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQAQLARGQRLRQILK 422

Query: 419 QSPS 422
           Q  +
Sbjct: 423 QPEN 426


>gi|299830366|ref|YP_003734581.1| ATP synthase CF1 alpha subunit [Kryptoperidinium foliaceum]
 gi|297385068|gb|ADI40366.1| ATP synthase CF1 alpha subunit [Kryptoperidinium foliaceum]
          Length = 503

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y +++ V   G +  +      V  L Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIREQIEQYDQDVKVDNIGTVLQVGDGIARVYGLDQ-VMSGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   GR  ++     + GRV++ALG PIDG   +   +
Sbjct: 67  LENDNVGVVLMGTGRQILEGSTVKATGRIAQVPVGEAFLGRVVSALGAPIDGKGEIASSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + +  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TQL-LEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDC--FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V + +     +N    ++VV A++++   L+ +AP     
Sbjct: 186 NQKTENVICVYVGVGQKASTVAQVVNVLEENNAMAYTIVVSASANDPATLQYIAPYAGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
            AEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 FAEYFMYKGKATLVIYDDLTKQAMAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPIIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F+E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAMKKVAGKLKLELAQFDELE---AFSQFASDLDEATQKQLARGTRLREVLK 422

Query: 419 QSPSDLSS 426
           Q  S   S
Sbjct: 423 QPQSAPLS 430


>gi|91214148|ref|YP_538770.1| ATP synthase CF1 alpha subunit [Glycine max]
 gi|125966704|sp|Q2PMS8|ATPA_SOYBN RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|83595749|gb|ABC25130.1| ATP synthase CF1 alpha subunit [Glycine max]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|139389403|ref|YP_001123100.1| ATP synthase CF1 alpha subunit [Olimarabidopsis pumila]
 gi|190358191|sp|A4QJR8|ATPA_OLIPU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286297|dbj|BAF49924.1| ATPase alpha subunit [Olimarabidopsis pumila]
          Length = 506

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSDAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|268679154|ref|YP_003303585.1| ATP synthase F1 subunit alpha [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617185|gb|ACZ11550.1| ATP synthase F1, alpha subunit [Sulfurospirillum deleyianum DSM
           6946]
          Length = 501

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 181/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E++  N+ + + G + S+      V  L + V  G+ V  +       G  + 
Sbjct: 8   SIIKERIENFELNVDIEETGKVISVADGVANVYGL-KNVMAGEMVEFENGER---GMALN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G   EI  G  V   G+  R+       GRV+N+LG PID    +   +
Sbjct: 64  LEESSVGIVVLGSCNEIKEGSSVKRLGKLLRVPVGEALVGRVVNSLGDPIDAKGPINATE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K    M R+ V +  +TG++ ID   P+  GQR  +      GK+T+      
Sbjct: 124 TRF-VEEKAHGIMARKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTII 182

Query: 184 SDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     V  I   +G++   V + ++          +++V A + +S  ++ +AP   V+
Sbjct: 183 NQKGQNVTCIYVAIGQKQSTVAQVVKKLEEHGAMDYTIIVNAGASDSAAMQFLAPYAGVS 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 243 MGEYFRDSGKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKV 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 303 NDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGIRPAINVGLSVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 363 RVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLERGQRMVELLK 419

Query: 419 QSP 421
           Q P
Sbjct: 420 QPP 422


>gi|290490170|gb|ADD31492.1| ATP synthase CF1 alpha subunit protein [Dillenia indica]
          Length = 507

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYREQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|115522310|ref|YP_779221.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris BisA53]
 gi|122297997|sp|Q07UZ3|ATPA_RHOP5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115516257|gb|ABJ04241.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris BisA53]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 180/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGIVIFGADREIKEGQTVKRTRSIVDTPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIVATE-RKRVDVKAPGIIPRKSVHEPMATGLKSIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V +F++        + S+VV A
Sbjct: 176 TAIALDTILNQKPLNVEGAPEGQKLYCVYVAIGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      ++GN   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDDEGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGSRLTELLKQPQF 434


>gi|7524779|ref|NP_045781.1| ATP synthase CF1 alpha subunit [Chlorella vulgaris]
 gi|3023328|sp|P56294|ATPA_CHLVU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|2224372|dbj|BAA57856.1| ATP synthase CF1 alpha chain [Chlorella vulgaris]
          Length = 506

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 183/436 (41%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + +  V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  SIIKQQIEQYQQEVKAVNVGTVFQVGDGIARIYGLDK-VMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GRV+N+L +PIDG   +   +
Sbjct: 67  LEAKNVGAVLMGEGTRVQEGSSVRATGKIAQIPVGDGYLGRVVNSLARPIDGKGEIATKE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 NRL-IESPAPGIISRRSVHEPLQTGIVAIDAMIPIGRGQRELIIGDRQTGKTAIAVDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V AT+D    L+ ++P T   
Sbjct: 186 NQKGKDVVCVYVAIGQKASSIAQVVNTLQERGAMDYTIIVAATADSPATLQYLSPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRHTLVIYDDLTKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 NDKLGSGSMTALPVVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLRELLK 422

Query: 419 QSP-SDLSSEDVFQEI 433
           QS  S LS ED    I
Sbjct: 423 QSQSSPLSLEDQVASI 438


>gi|81176244|ref|YP_398323.1| ATP synthase CF1 alpha subunit [Lactuca sativa]
 gi|126253658|sp|Q332Y4|ATPA_LACSA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|78675162|dbj|BAE47588.1| ATP synthase CF1 alpha chain [Lactuca sativa]
 gi|88656977|gb|ABD47227.1| ATP synthase CF1 alpha subunit [Lactuca sativa]
          Length = 508

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + + ++        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGKNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|7525018|ref|NP_051044.1| ATP synthase CF1 alpha subunit [Arabidopsis thaliana]
 gi|6685244|sp|P56757|ATPA_ARATH RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|5881679|dbj|BAA84370.1| ATPase alpha subunit [Arabidopsis thaliana]
          Length = 507

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|1168565|sp|P42005|ATPA_BACST RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|534852|dbj|BAA07253.1| ATPase subunit alpha [Geobacillus stearothermophilus]
          Length = 502

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 174/426 (40%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  I         L   V  G+ V         +G  + 
Sbjct: 10  ALIKQQIENYESQIQVSDVGTVIQIGDGIARAHGL-DNVMSGELVEFANA---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -TRPIESPAPGVMDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDQNMICIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMYKGQHVLVVYDDLSKQAAAYRELSLFVRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L   L      P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSRVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLARGARTVEVLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QDLHQP 427


>gi|298530318|ref|ZP_07017720.1| ATP synthase F1, alpha subunit [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509692|gb|EFI33596.1| ATP synthase F1, alpha subunit [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 502

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 189/439 (43%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ E   KN   +      G + S+      V  + +     + +   G  
Sbjct: 1   MQIKAEEISQIIEGQIKNYEKRVEMSETGVVLSVGDGIARVYGV-ENAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V    +G    I  GD+V   GR  ++       GRVI+ LG P+D
Sbjct: 59  --VMGMVLNLEEDSVGCALLGEDTHIKEGDMVKRTGRIVQVPVGDAVQGRVIDPLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + +  K P  + R+ V +   TG++ ID  TP+  GQR  +     +GK
Sbjct: 117 GLGPIEAKEHRL-VEVKAPGIVPRKSVHEPMNTGLKAIDAMTPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   S+ A+ +     I   +G++   V + ++          + V+ AT+ +   ++
Sbjct: 176 TAICIDSILAQRETDVHCIYVAIGQKKSTVAQVVDTLRKYGALDFTTVISATASDPASMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  KG + L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 FIAAYAGCTMGEYFRDKGQHALIMYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++TA+  +     + +  I  +V SI DG + L  SL   G  P
Sbjct: 296 RLLERAAKMSDEHGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPSLFYAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   + ++ E   +     +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAVKKVAGTLRLDLAQYRE---LAAFAQFGSDLDKATQKRLTR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 413 GERLVELLKQPQYQPMSSE 431


>gi|91975037|ref|YP_567696.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris BisB5]
 gi|123722174|sp|Q13DP4|ATPA_RHOPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91681493|gb|ABE37795.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris BisB5]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 180/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGL-DNVLAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGIVIFGADREIKEGQTVKRTRSIVDTPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQATE-RKRVDVKAPGIIPRKSVNEPMATGLKAIDALIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   VG++   V +F++        + S+VV A
Sbjct: 176 TAIALDTILNQKPLNVEGAPEGQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ G+   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNEDHGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGSRLTELLKQPQF 434


>gi|119510739|ref|ZP_01629866.1| ATP synthase subunit A [Nodularia spumigena CCY9414]
 gi|119464603|gb|EAW45513.1| ATP synthase subunit A [Nodularia spumigena CCY9414]
          Length = 506

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L +    G+ +  +      +G    
Sbjct: 12  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEK-AMAGELLEFEDG---TIGIAQN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G EI  G  V   GR  ++       GRV++ALG+ IDG   +   +
Sbjct: 68  LEEDNVGAVLMGQGLEIQEGSSVTATGRIAQVPVGEAMVGRVVDALGRAIDGKGDINTTE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 128 SRL-IESAAPGIIARRSVHEPMQTGITAIDSMIPVGRGQRELIIGDRQTGKTAIAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   ++          +VVV A++ E   L+ +AP T  +
Sbjct: 187 NQKGEDVICVYVAIGQKASTVANVVQTLQEKGAMDYTVVVAASASEPATLQFLAPYTGAS 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 307 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAVNPGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 367 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKATQDQLARGERLRELLK 423

Query: 419 QSPS 422
           Q  +
Sbjct: 424 QPQN 427


>gi|93007315|gb|ABE97162.1| AtpA [Pasteuria ramosa]
          Length = 504

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 107/432 (24%), Positives = 190/432 (43%), Gaps = 15/432 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++ ++ L    E+Y+ ++ V   G +  +      +  L + V  G+ V         +G
Sbjct: 8   KRLVQLLESKIENYNLDIQVADIGTVIQVGDGIARMHGLGE-VMAGELVEFSNG---IMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
            V  + L+ V +  +G  E I  GD     GR   +       GR++N LG+P+DG   +
Sbjct: 64  MVANLELENVGVVILGSCETIKEGDTAKRTGRLMEVPVGEQLLGRIVNPLGQPLDGLGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            K +    I +  P  ++R+ V +  +TGI+ ID   P+  GQR  +      GK+T+  
Sbjct: 124 -KTEHFRPIEANAPGVIDRRSVHQPLQTGIKAIDAMVPIGRGQRELIIGDRQTGKTTIAI 182

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
            ++  + +   K I   +G++   V   +E     D L  + VVVA++ +   L  +AP 
Sbjct: 183 DTIINQKNTNVKCIYVAIGQKQSTVAHVVEKLRKHDALSYTTVVVASASDPFPLLFLAPY 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              ++ E+    G +VL + D +++ A S RE++      P    YP  VF    RLLER
Sbjct: 243 AGCSMGEHIMYNGGHVLCVYDDLSKQAASYRELSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     + +  I  +V SI DG I L  SL   G  P V+  
Sbjct: 303 AAQLSDECGGGSLTALPLIETQAGDISAYIPTNVISITDGQIFLESSLFHSGIRPAVNVG 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A      K+  +L   + ++   +++     +   +D      + +   + 
Sbjct: 363 FSVSRVGGAAQIKAMSKIAGTLRLDLSQY---QELAAFAQFGSDLDASTRAKLARGERVM 419

Query: 415 DFLKQSPSDLSS 426
           + LKQ  +   S
Sbjct: 420 EILKQDENQPLS 431


>gi|86747393|ref|YP_483889.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris HaA2]
 gi|119367961|sp|Q2J3I2|ATPA_RHOP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|86570421|gb|ABD04978.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris HaA2]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 180/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGVVIFGADREIKEGQTVKRTRSIVDTPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQATE-RKRVDVKAPGIIPRKSVNEPMATGLKAIDALIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   VG++   V +F++        + S+VV A
Sbjct: 176 TAIALDTILNQKPLNVEGAPEGQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      + G  ++TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDDHGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGARLTELLKQPQF 434


>gi|78102516|ref|YP_358657.1| ATP synthase CF1 alpha subunit [Nicotiana sylvestris]
 gi|81238324|ref|NP_054481.2| ATP synthase CF1 alpha subunit [Nicotiana tabacum]
 gi|116237305|sp|Q3C1H4|ATPA_NICSY RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|76559637|emb|CAA77341.2| ATPase alpha subunit [Nicotiana tabacum]
 gi|77799543|dbj|BAE46632.1| ATPase alpha subunit [Nicotiana sylvestris]
          Length = 507

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|209883744|ref|YP_002287601.1| ATP synthase F1, alpha subunit [Oligotropha carboxidovorans OM5]
 gi|226739919|sp|B6JD06|ATPA_OLICO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|209871940|gb|ACI91736.1| ATP synthase F1, alpha subunit [Oligotropha carboxidovorans OM5]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 180/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQDAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLESDNVGIVIFGADREIKEGQTVKRTRAIVDTPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QSDERKRVDVKAPGIIPRKSVHEPMATGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   VG++   V +F++        + S+VV A
Sbjct: 176 TAVALDTILNQKPLNVAGAPESQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYLAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G++TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSAKLNDSLGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGARLTELLKQPQF 434


>gi|27377312|ref|NP_768841.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
 gi|27350455|dbj|BAC47466.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
          Length = 441

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 168/436 (38%), Positives = 253/436 (58%), Gaps = 7/436 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLG-DFVVHQGKNSDNLGQVIR 64
           + LA+   D     V   G +  +  +   V      + +G   V+  G N     +VI 
Sbjct: 2   KALAEQIGDIDG--VNIYGRVVGVRGLMVEVAGPIHAMSVGARLVIETGANRSIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + +   + P    + +  G   V      ++ PS  W GRV+NALG+PIDG   L +G 
Sbjct: 60  FSGNNAVVMPFAGLDGVRRGCKAVIANAANQVRPSTAWLGRVVNALGEPIDGKGPLPQGS 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M   +  PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMPFRNTPPPAHSRKRVGSPLDLGVRAMNTFLTCCRGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +      +I L+GERGREV+EF++ D   + L +SVVVVATSDE  ++R+ A    + +A
Sbjct: 180 NVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAVA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP   
Sbjct: 240 EYFRDEDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLG 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G ITA+ +VLVDGD+HN+PIAD+VR ILDGHIV+ RS+AE GRYP ++ L SVSR   
Sbjct: 300 -EGAITAIFTVLVDGDDHNEPIADAVRGILDGHIVMQRSIAERGRYPAINILKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K+   +    +     ++  + +  ++  +G YR G    +D+A+     +  FL+Q   
Sbjct: 359 KSADPEFWPTIQKARQVMATYADMEELIRLGAYRAGSSPEVDEAIRLHEPLEGFLRQRKD 418

Query: 423 DLSS-EDVFQEITKKL 437
           + +S  D ++++ + L
Sbjct: 419 ENASLADGYRQLAQIL 434


>gi|78187827|ref|YP_375870.1| F0F1 ATP synthase subunit alpha [Chlorobium luteolum DSM 273]
 gi|115312233|sp|Q3B1F4|ATPA2_PELLD RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|78167729|gb|ABB24827.1| ATP synthase F1 subcomplex alpha subunit [Chlorobium luteolum DSM
           273]
          Length = 526

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 173/445 (38%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      AE Y        G +  +      V  LS+    G+ +    K    +G
Sbjct: 14  LRKQLAGFESEAEVYD------VGTVLQVGDGIARVYGLSKAAA-GELLEFPNK---VMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G   E+  GD V   G    +       GRV+N LG PIDG   +
Sbjct: 64  MALNLEEDNVGAVLFGDSTEVKEGDTVKRTGILASVPVGEAMLGRVVNPLGVPIDGKGII 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D+ + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 D-TDIRLPLERRAPGVIYRKSVHEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAVAL 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G +G  V + +           + V+ AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVYCIYVAIGLKGSTVAQVVNTLEKHGAMEYTTVITATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGAALGEYFRDTGRHALVVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFFLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVAKKMNDLPDALRPMVQGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNSGQRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKTTKAQLDRGARLVEILKQGQ 444


>gi|313894323|ref|ZP_07827888.1| ATP synthase F1, alpha subunit [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441147|gb|EFR59574.1| ATP synthase F1, alpha subunit [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 512

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 176/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  +DY  +L V   G +  +      +  L +    G+ +          G V+ 
Sbjct: 10  AIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLER-AMAGELLELP---HGVYGLVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           + LD V    +G    I  GD V   G+    P      GRV+N LG+P+DG  ++   +
Sbjct: 66  LELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLDGKGAIQTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +    P   +RQ V +  +TG++ ID   P+  GQR  +    G GK+ +      
Sbjct: 126 -RRPVEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGKTAIALDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          ++VV A++     L+ +AP   V 
Sbjct: 185 NQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQYIAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  +G +VL + D +T+ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   +   G  P VD   SVS
Sbjct: 305 SPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRPAVDVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + ++ E   +     +   +D      + +   + + LK
Sbjct: 365 RVGGSAQTKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDAATRAQLDRGQRLTEMLK 421

Query: 419 QSPSDLSS 426
           Q   +  S
Sbjct: 422 QGQYEPMS 429


>gi|83592560|ref|YP_426312.1| ATP synthase F1, subunit alpha [Rhodospirillum rubrum ATCC 11170]
 gi|114525|sp|P05036|ATPA_RHORU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007207|sp|Q2RV20|ATPA_RHORT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|46366|emb|CAA26338.1| unnamed protein product [Rhodospirillum rubrum]
 gi|83575474|gb|ABC22025.1| ATP synthase F1, alpha subunit [Rhodospirillum rubrum ATCC 11170]
          Length = 510

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 177/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+     ++ + ++   N        + G + S+      V  L   V  G+ V      
Sbjct: 1   MEIRAAEISAILKEQIANFGTEAESAEVGQVLSVGDGIARVYGL-DNVQAGEMVEFANG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V I   G    I  GD+V        +       GRV++ LG PID
Sbjct: 59  --VKGMALNLESDNVGIVIFGEDRGIKEGDVVKRTQTIVDVPVGKGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +       K P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGDLVDVE-RKRAEVKAPGIIPRKSVHEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + ++     +                 +   VG++   V + ++          ++VV A
Sbjct: 176 TAVILDTILNQKAVNDKAKDDSEKLFCVYVAVGQKRSTVAQVVKVLADHGALDYTIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ E   L+ +AP T  T+ E+F   G + ++  D +T+ A + R+++      P    +
Sbjct: 236 TASEPAPLQFLAPYTGCTMGEFFRDNGMHAVIFYDDLTKQAVAYRQMSLLLRRPPGREAF 295

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      + G  ++TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDDNGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D
Sbjct: 356 DLFFKGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKLELAQYRE---MAAFAQFASDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
               K + +   + + LKQ+ 
Sbjct: 413 PATQKLLARGARLTELLKQAQ 433


>gi|220927120|ref|YP_002502422.1| F0F1 ATP synthase subunit alpha [Methylobacterium nodulans ORS
           2060]
 gi|254808105|sp|B8IN03|ATPA_METNO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219951727|gb|ACL62119.1| ATP synthase F1, alpha subunit [Methylobacterium nodulans ORS 2060]
          Length = 509

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 100/436 (22%), Positives = 187/436 (42%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      V  L + V  G+ V  +   S   G
Sbjct: 12  LKEQIKNFGQEAE------VTEVGQVLSVGDGIARVYGLDK-VQAGEMVEFE---SGVRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G+  +I  G  V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLEQDNVGVVIFGVDRDIKEGQTVKRTGAIVDVPVGKGLLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK     
Sbjct: 122 VASE-RRRVDVKAPGIIPRKSVHEPMATGLKSVDALIPIGRGQRELIIGDRQTGKTAIAL 180

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+     +  D       +   VG++   V +F++    +   + S+V+ AT+ +  
Sbjct: 181 DTILNQKPAHEGSDEKAKLYCVYVAVGQKRSTVAQFVKVLEDNGALEYSIVIAATASDPA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP +   + E+F   G + ++I D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQFLAPFSGCAMGEFFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER        G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D    + 
Sbjct: 361 VRPAVNVGLSVSRVGSAAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLDAATQRL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQ   
Sbjct: 418 LNRGSRLTELLKQPQF 433


>gi|139390137|ref|YP_001123710.1| ATP synthase CF1 alpha subunit [Lobularia maritima]
 gi|190358182|sp|A4QLH9|ATPA_LOBMA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286914|dbj|BAF50534.1| ATPase alpha subunit [Lobularia maritima]
          Length = 507

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGQISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|11465567|ref|NP_045041.1| ATP synthase CF1 alpha subunit [Cyanidium caldarium]
 gi|14547918|sp|Q9TM26|ATPA_CYACA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|6466423|gb|AAF13005.1|AF022186_177 unknown [Cyanidium caldarium]
          Length = 504

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 113/435 (25%), Positives = 193/435 (44%), Gaps = 17/435 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E Y++++ ++  G +  +      +  L   +  G+ +  + K    +G  + 
Sbjct: 11  SILKQQIERYNESVKIENTGTVLQVGDGIARIYGL-DNIMAGELLEFEEK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  G  V   G+  +I       GRV+NALG PIDG  +    D
Sbjct: 67  LETDNVGAVLMGDGRDILEGSSVKGTGKIAQIGVGDNLLGRVLNALGNPIDGKPNPNSTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
             + I    P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+   L ++ 
Sbjct: 127 YRL-IEFNAPGIVSRRSVCEPIQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIALDTII 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + +     I   +G++   V + +      D LK +VV+ A ++E   L+ +AP T   
Sbjct: 186 NQKEENVICIYVAIGQKASSVAQAVTLLEEKDALKYTVVIAANANEPATLQYIAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYKGLATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NNELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPSINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F+E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFDELQ---AFSQFASDLDKSTQAQLARGQRLRELLK 422

Query: 419 QSPSDLSSEDVFQEI 433
           Q     S   V+++I
Sbjct: 423 QPQ--ASPISVYEQI 435


>gi|16329327|ref|NP_440055.1| F0F1 ATP synthase subunit alpha [Synechocystis sp. PCC 6803]
 gi|114530|sp|P27179|ATPA_SYNY3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|47513|emb|CAA41135.1| ATPase subunit alpha [Synechocystis sp. PCC 6803]
 gi|1651808|dbj|BAA16735.1| ATP synthase a subunit [Synechocystis sp. PCC 6803]
          Length = 503

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      +  L Q V   + +  +      +G  + 
Sbjct: 11  SIIRQQIESYDQSVQVSNVGTVLQVGDGTARIYGLEQ-VMSQELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I       GRV+++LG+PIDG   +    
Sbjct: 67  LEEDNVGAVLMGDGFGIQEGSTVKTTGQIAQIPIGDAMVGRVVDSLGRPIDGKGPISSTA 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-LESPAPGIIERKSVCEPMQTGITAIDAMIPIGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + I+          ++VV A +++   L+ +AP T  T
Sbjct: 186 NQKSEDVICVYVAIGQKASTVAQIIDTLTEKGAMAYTIVVAANANDPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +G + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEHFMYQGKSTLVIYDDLSKQAQAYRQMSLLMRRPPGREAYPGDVFYIHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSTDLFNAGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F E         +   +D      + +   +   LK
Sbjct: 366 RVGSAAQTKAMKKVAGKLKLELAQFAELE---AFSQFASDLDAATQAQLARGQRLRQLLK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPENSPLS 430


>gi|290490200|gb|ADD31507.1| ATP synthase CF1 alpha subunit protein [Gunnera manicata]
          Length = 504

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 184/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYTIEVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMDYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + +
Sbjct: 425 QSSPLTVE 432


>gi|282901090|ref|ZP_06309023.1| ATP synthase subunit alpha [Cylindrospermopsis raciborskii CS-505]
 gi|281194181|gb|EFA69145.1| ATP synthase subunit alpha [Cylindrospermopsis raciborskii CS-505]
          Length = 506

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L Q V  G+ +  +      +G    
Sbjct: 12  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGLEQ-VMSGELLEFEDG---TVGIAQN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V    +  ++       GRV++ALG+ IDG   + K  
Sbjct: 68  LEEDNVGAVLMGEGRNIQEGSTVTATAKIAQVGVGEALIGRVVDALGRAIDGKGEI-KAT 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+++      
Sbjct: 127 TSRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTSIAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   ++        + +VVV A + +   L+ +AP T  T
Sbjct: 187 NQKGEDVVCVYVAVGQKASTVANVVQTLQEKGALEYTVVVAANASDPATLQFLAPYTGAT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 IAEYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 307 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGVRPAVNPGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 367 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKTTQDQLARGQRLRELLK 423

Query: 419 QSPSDLSS 426
           Q  +D  S
Sbjct: 424 QPQNDPLS 431


>gi|290490202|gb|ADD31508.1| ATP synthase CF1 alpha subunit protein [Heuchera sanguinea]
          Length = 507

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIPASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|159027205|emb|CAO89299.1| atpA [Microcystis aeruginosa PCC 7806]
          Length = 502

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 181/426 (42%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y++ + V   G +  +      +  L Q +  G+ +  +      +G  + + 
Sbjct: 13  IRQQIESYNQEVQVSNVGTVLQVGDGTARIYGLQQAMS-GELLEFEDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G  I  G  V   G+  ++       GRV++ALG+PIDG   +   +  
Sbjct: 69  EDNVGAVLMGDGFGIKEGGTVKATGKIAQVPVGDALVGRVVDALGRPIDGKGDILASETR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      + 
Sbjct: 129 L-VESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTAIAIDTIINQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + I+          +VVV A +++   L+ +AP T  +IA
Sbjct: 188 KTEDVICVYVAIGQKASTVAQVIDTLTQRGAMDYTVVVAANANDPATLQYIAPYTGASIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYKGKATLVIYDDLTKQAQAYRQLSLLMRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSTDLFNAGFRPAINAGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+   L   + +F+E         +   +D      + +   +   LKQ 
Sbjct: 368 GSAAQTKAMKKVAGKLKLELAQFDELE---AFAQFASDLDAATQAQLARGQRLRQILKQP 424

Query: 421 PSDLSS 426
            +   S
Sbjct: 425 QNFPLS 430


>gi|1929511|gb|AAB51464.1| ATP synthase subunit alpha [Moorella thermoacetica]
          Length = 507

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 101/427 (23%), Positives = 173/427 (40%), Gaps = 16/427 (3%)

Query: 6   ETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E Y   +   + G ++ +      +  L +    G+ +   G   D  G V+ 
Sbjct: 10  SILKNQIEQYQLEVEMAEVGTVTQVGDGIARIYGLDR-AMAGELLEFPG---DIYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   GR   +       GRV+NA+G+PIDG   + + D
Sbjct: 66  LEEDNVGAVILGPYTHIKEGDQVKRTGRIVEVPVGEALIGRVVNAMGQPIDGKGPI-QTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + S  P  + RQ V    +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRPVESPAPGVVYRQPVNTPLQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIAVDTII 184

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V   ++           +VV+AT+ E   +  +AP    T
Sbjct: 185 NQKGQNVICIYVAIGQKASTVAGVVQRLEEAGAMEYIIVVMATASEPAPMLYIAPYAGCT 244

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           + EYF   +  +VL + D +++ A + RE++      P    YP  VF     LLER   
Sbjct: 245 MGEYFMYEQHRDVLCVYDDLSKHAAAYRELSLLLRRPPGREPYPGDVFYLHSGLLERPAR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G++TA+  +     + +  I  +V SI DG I L   L   G+ P ++   SV
Sbjct: 305 LTDSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESDLFYAGQRPAINVALSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++ + L   + ++ E   +     +   +D      + +   + + L
Sbjct: 365 SRVGGAAQIKAMKQVAARLRLDLAQYRE---LAAFAQFGSDLDKATQARLARAERMMEIL 421

Query: 418 KQSPSDL 424
           KQ     
Sbjct: 422 KQDQYQP 428


>gi|269836579|ref|YP_003318807.1| ATPase, FliI/YscN family [Sphaerobacter thermophilus DSM 20745]
 gi|269785842|gb|ACZ37985.1| ATPase, FliI/YscN family [Sphaerobacter thermophilus DSM 20745]
          Length = 442

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 160/425 (37%), Positives = 240/425 (56%), Gaps = 11/425 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQVIRINLDIVYICPVG 76
           + + G +  +  +  T+      + +GD       + +      +V+    D + + P+ 
Sbjct: 22  IRREGRV--VQGIGLTIEAQGLELEIGDICHIYPSRSEEGRITAEVVGFRDDRLVLVPLA 79

Query: 77  IGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G  V      + +       GRVI+ LG+PIDG   L   D +  + S  P  
Sbjct: 80  ELRGVRSGSRVVARRTSYSVKVGPELLGRVIDGLGRPIDGQGPLLCRDETR-LSSSPPDP 138

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++R  +E    TGIR ID       GQR+G+FAGSG+GKSTLL M  R+   D  +++L+
Sbjct: 139 LSRMPIEHPLPTGIRAIDALITCGRGQRLGIFAGSGVGKSTLLGMICRNADCDVRVVALI 198

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EFI  D   + L +SVVVV+TSD+  +LR  A  TA  IAEYF  +G NV L
Sbjct: 199 GERGREVQEFIERDLGPEGLARSVVVVSTSDQPALLRLKAAWTATMIAEYFRDRGLNVAL 258

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI    GE P  RGY  SVF+ LPRLLER G +E  +G+ITA  +VL
Sbjct: 259 LMDSVTRLAMAQREIGLAVGEPPTTRGYTPSVFALLPRLLERAGNAE--RGSITAFYTVL 316

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+  +P+ D+VR ILDGHI L+R LA+ G +P ++ L SVSRL +       ++L +
Sbjct: 317 VEGDDLTEPVTDAVRGILDGHIYLSRKLADSGHFPAIEVLGSVSRLMNAIVDERHRRLAA 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEI 433
            +  L+  +E  RD+  IG Y  G + ++D+A+  +P I +FL+Q+P + +  D     +
Sbjct: 377 EVRELMAAYEGARDLIEIGAYAAGSNPVVDRAIAHMPRIREFLRQAPDEPARMDETLNRL 436

Query: 434 TKKLQ 438
              L+
Sbjct: 437 ASVLE 441


>gi|91983977|ref|YP_567061.1| ATP synthase CF1 alpha subunit [Vitis vinifera]
 gi|118573497|sp|Q0ZJ35|ATPA_VITVI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|91701635|gb|ABE47519.1| ATP synthase CF1 alpha subunit [Vitis vinifera]
 gi|239764716|gb|ACS15187.1| ATPase alpha subunit [Vitis vinifera]
          Length = 507

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|89280620|ref|YP_514837.1| ATP synthase CF1 alpha chain [Solanum lycopersicum]
 gi|91208973|ref|YP_538833.1| ATP synthase CF1 alpha subunit [Solanum bulbocastanum]
 gi|108773115|ref|YP_635624.1| ATP synthase CF1 alpha subunit [Solanum tuberosum]
 gi|110832067|sp|Q27S65|ATPA_SOLTU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|115503412|sp|Q2MIB5|ATPA_SOLLC RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|115503413|sp|Q2MIK2|ATPA_SOLBU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|84371880|gb|ABC56198.1| ATP synthase CF1 alpha subunit [Solanum bulbocastanum]
 gi|84371968|gb|ABC56285.1| ATP synthase CF1 alpha subunit [Solanum lycopersicum]
 gi|88656789|gb|ABD47042.1| ATP synthase CF1 alpha subunit [Solanum tuberosum]
 gi|89241656|emb|CAJ32378.1| ATP synthase CF1 alpha chain [Solanum lycopersicum]
          Length = 507

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|315587022|gb|ADU41403.1| ATP synthase F1 sector alpha subunit [Helicobacter pylori 35A]
          Length = 503

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTRSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|220919584|ref|YP_002494888.1| ATP synthase F1, alpha subunit [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|254807670|sp|B8JCV2|ATPA_ANAD2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219957438|gb|ACL67822.1| ATP synthase F1, alpha subunit [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 510

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  +DY K + V + G I S       +  L+     G+ +   G      G V+ + 
Sbjct: 12  IREQIKDYGKKVEVAETGSILSQADGVARIYGLAGAAA-GELLEFPGG---IRGLVLNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G  E I  GD V   G    +       GRV++ LG PIDG   L      
Sbjct: 68  EDNVGAAIMGPYEHIREGDPVKRTGLIAEVPVGEELLGRVVDGLGNPIDGRGPLN-AKHH 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
            +I  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +      ++
Sbjct: 127 RKIEIKAPGIVKRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAIDTILNN 186

Query: 186 CFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             +        +G++   V   ++          + V+ A++ +   ++ +AP T VT+A
Sbjct: 187 KGNNLYCFYVAIGQKQSTVARVVDTLKKYGAMEYTTVISASASDPAPMQYLAPYTGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 247 EYFRDSGRHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           ++G  ++TA+  +     + +  I  +V SI DG I L  +L  +G  P ++   SVSR+
Sbjct: 307 KEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESNLFYQGVRPAINVGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  SL   + ++ E   +     +   +D    + + +   + + LKQ 
Sbjct: 367 GGSAQIKAMKQVAGSLKLDLAQYRE---LAAFAQFGSDLDKATQETLARGERLVELLKQG 423

Query: 421 PSDLSSED 428
                S +
Sbjct: 424 QYAPLSVE 431


>gi|57504651|ref|ZP_00370729.1| ATP synthase F1, alpha subunit [Campylobacter coli RM2228]
 gi|305432646|ref|ZP_07401807.1| ATP synthase F1 sector alpha subunit [Campylobacter coli JV20]
 gi|57019420|gb|EAL56115.1| ATP synthase F1, alpha subunit [Campylobacter coli RM2228]
 gi|304444357|gb|EFM37009.1| ATP synthase F1 sector alpha subunit [Campylobacter coli JV20]
          Length = 501

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 187/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V     +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFDNGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVILGKGEGLKEGTSVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVINSNEFRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAVDTIISQKGQGVVCIYVAIGQKQSTVAQVVKRLEEHGAMDYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|291566391|dbj|BAI88663.1| ATP synthase alpha chain [Arthrospira platensis NIES-39]
          Length = 505

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 187/434 (43%), Gaps = 17/434 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +    E Y +++ V   G +  +      +  L +    G+ +         +G  + + 
Sbjct: 13  IKDQIEQYGQDVKVSNVGTVLQVGDGIARIYGLDK-AMAGELLEFADG---TIGVALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G EI  G  V   GR  ++       GRVI+ALG+PIDG   +   D  
Sbjct: 69  EDNVGAVLMGEGLEIQEGSAVTATGRIAQVPVGEAMLGRVIDALGRPIDGKGEIQASDTR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
           + + S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++  +
Sbjct: 129 L-LESPAPGIIDRRSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            +     +   +G++   V + +           ++VV A + +   L+ +AP T   +A
Sbjct: 188 KEEDVICVYVAIGQKASTVAQVVSTLEEKGALPYTIVVAANASDPATLQYLAPYTGAAMA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G   L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLND 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V+   SVSR+
Sbjct: 308 ELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAVNAGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+   +   + +F E   +     +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQTKAMKKVAGKVKLELAQFAE---LAAFSQFASDLDQATRNQLERGKRLQELLKQP 424

Query: 421 PSDLSSEDVFQEIT 434
            +  S   +F+++ 
Sbjct: 425 QN--SPLQLFEQVA 436


>gi|223983272|ref|ZP_03633465.1| hypothetical protein HOLDEFILI_00745 [Holdemania filiformis DSM
           12042]
 gi|223964765|gb|EEF69084.1| hypothetical protein HOLDEFILI_00745 [Holdemania filiformis DSM
           12042]
          Length = 506

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 181/437 (41%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L ++  K+          GY+  +      +  L + +   + ++     
Sbjct: 1   MSLRPEEISALIKEQIKHYEDKIQSNDVGYVIRVGDGIALIQGLDKAMS-SELLLFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  D V    +G    I  GD V   GR   +       GRV+NALG+PID
Sbjct: 57  HDVYGMVLNLEEDHVGAVLLGDDTLIKEGDEVKRTGRIVEVPVGDGMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D +  +    P  M R+ V +   TG+++ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-ASDKTRPVERVAPGVMTRKSVHQPLMTGLKIIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +E     D +  + +V AT+ E   L+
Sbjct: 176 TAIAVDTILNQKGQDVYCIYVAIGQKASTVAQIMEKLRQHDAMDYTTIVAATASEMAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGCAIGEEWMEQGKDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDELGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K++  SL   + ++ E   +     +   +D +    +  
Sbjct: 356 AVDSGLSVSRVGSAAQTKAMKQVSGSLKLDLAQYHE---MLSFSQFGSDLDPVTKATIDH 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      +
Sbjct: 413 GARLTELLKQGQYSPLT 429


>gi|61992028|gb|AAX58149.1| ATPase alpha subunit [Lactuca sativa]
          Length = 474

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + + ++        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGKNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|146296977|ref|YP_001180748.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410553|gb|ABP67557.1| ATP synthase F1 subcomplex alpha subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 507

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 98/423 (23%), Positives = 169/423 (39%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K +     G +         +  L      G+ +       +  G  + 
Sbjct: 13  SIIKEQIKNYEKKIETNDVGVVIMSGDGIARIHGL-DNCMAGELLEFPN---NVYGMALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G   EI  G +V   GR   +       GRV+NALG+PIDG   +    
Sbjct: 69  LEEDNVGCVILGNDREIKEGTIVKRTGRVVEVPVGEELLGRVVNALGQPIDGLGPIN-AK 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               +    P  + R+ V+   +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 128 KYRPVERIAPGVIEREPVKTPLQTGIMAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V + +           ++VV AT+ +S  L+ +AP     
Sbjct: 188 NQKDQGVYCIYVAIGQKASTVAQIVHTLKEYGAMDYTIVVSATASDSAPLQFLAPYAGCA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G + L++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMESGKDALIVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NSQRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFYAGIRPAINAGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + ++ E         +   +D    + + Q   I + LK
Sbjct: 368 RVGGNAQIKAMKKVAGRLRLDLAQYRELE---AFAQFGSELDKSTRERLAQGQRIVETLK 424

Query: 419 QSP 421
           Q  
Sbjct: 425 QPQ 427


>gi|325295432|ref|YP_004281946.1| ATP synthase subunit alpha [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065880|gb|ADY73887.1| ATP synthase subunit alpha [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 504

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 179/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E +++L     +         + G +  +      V  L + V  G+ V  +   
Sbjct: 3   MQIRAEEISELIRKQIEEFEASVKLDETGIVIKVGDGVARVYGL-ENVEYGEVVEFEDGT 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  D V +  +G G  I  G      GR   +       GRV++ LG+PID
Sbjct: 62  E---GVAFNLEEDNVGVVLLGEGRGIVEGSKAKRTGRILDMPVGDGLIGRVLDPLGRPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 119 GKGDIEYVE-RRAVERIAPGLVTRKPVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSDC--FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        +   +G++   V + I+          ++V+ AT+ +   L+
Sbjct: 178 TTIAIDTILNQKREGVICVYCAIGQKRSTVAQTIQLLKEHGAMDYTIVIAATASDPAALQ 237

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +AVT+AEYF   G   L+I D +++ A + RE++      P    YP  VF    
Sbjct: 238 YLAPYSAVTVAEYFRDTGRAALIIYDDLSKQAVAYREMSLLLRRPPGREAYPGDVFYLHS 297

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L  +G+ P
Sbjct: 298 RLLERAAKLNDELGAGSLTALPIIETKAGDISAYIPTNVISITDGQIFLETDLFYKGQRP 357

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + R+ E         +   +D      + +
Sbjct: 358 AINVGLSVSRVGGAAQIKAMKQVAGKLRLELARYRELE---AFSQFASDLDPATRAQLER 414

Query: 410 VPIIYDFLKQSP 421
              + + LKQ P
Sbjct: 415 GRRMMELLKQPP 426


>gi|282898191|ref|ZP_06306182.1| ATP synthase F1, alpha subunit [Raphidiopsis brookii D9]
 gi|281196722|gb|EFA71627.1| ATP synthase F1, alpha subunit [Raphidiopsis brookii D9]
          Length = 506

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L Q V  G+ +  +      +G    
Sbjct: 12  SIIQQQIEQYDQEVKVANVGTVLQVGDGIARIYGL-QQVMSGELLEFEDG---TVGIAQN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V    +  ++       GRV++ALG+ IDG   + K  
Sbjct: 68  LEEDNVGAVLMGEGRNIQEGSTVTATAKIAQVGVGEALIGRVVDALGRAIDGKGEI-KAT 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+++      
Sbjct: 127 TSRLIESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTSIAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   ++        + +VVV A + +   L+ +AP T  T
Sbjct: 187 NQKGEDVVCVYVAVGQKASTVANVVQTLQEKGALEYTVVVAANASDPATLQFLAPYTGAT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 IAEYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVS
Sbjct: 307 SDELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGVRPAVNPGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F++ +       +   +D      + +   + + LK
Sbjct: 367 RVGSAAQTKAMKKVAGKIKLELAQFDDLQ---AFSQFASDLDKATQDQLARGQRLRELLK 423

Query: 419 QSPSDLSS 426
           Q  +D  S
Sbjct: 424 QPQNDPLS 431


>gi|119358312|ref|YP_912956.1| F0F1 ATP synthase subunit alpha [Chlorobium phaeobacteroides DSM
           266]
 gi|158512400|sp|A1BJF5|ATPA_CHLPD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119355661|gb|ABL66532.1| ATP synthase F1 subcomplex alpha subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 526

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 176/445 (39%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      A+ Y        G +  +      V  LS+    G+ +    K    +G
Sbjct: 14  LRKQLAGFESEADVYD------VGTVLQVGDGIARVYGLSKAAA-GELLEFPNK---VMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G    +  GD V   G    I       GRVIN LG+PIDG   +
Sbjct: 64  MALNLEEDNVGAVLFGESNLVKEGDTVKRTGILASIPVGEAMLGRVINPLGEPIDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +  + + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 -ETQIRLPLERRAPGVIYRKSVHEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAVAI 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
               +        I   +G +G  V + +        ++ + V+ AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVFCIYVAIGLKGSTVAQVVNTLEKFGAMEYTTVITATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              T+ EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGATLGEYFRDTGRHALVVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVARKMNDLPDALKSMVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNSGQRPAINVGISVSRVGGSAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKTTKAQLDRGARLVEILKQGQ 444


>gi|290490182|gb|ADD31498.1| ATP synthase CF1 alpha subunit protein [Nerium oleander]
          Length = 505

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG  ++   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSDAYLGRVINALAKPIDGRGAISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTALQEKGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|209877320|ref|XP_002140102.1| ATP synthase F1, alpha subunit [Cryptosporidium muris RN66]
 gi|209555708|gb|EEA05753.1| ATP synthase F1, alpha subunit, putative [Cryptosporidium muris
           RN66]
          Length = 560

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 184/439 (41%), Gaps = 29/439 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
            +  L ++ E+    L     + + G++ S+      V  L Q V  G+ +     +S  
Sbjct: 45  RIPELNKILEEKISGLKLDLSISEIGHVISVGDGIVRVYGL-QNVQYGEMLEF---SSGV 100

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V +   G    I  GD+V                GRV++ALG  IDG  
Sbjct: 101 KGMALNLESDNVGVVIFGEDRGIKEGDIVKRTKTIVNTPVGTGLLGRVVDALGNAIDGKG 160

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +    +  K P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+ L
Sbjct: 161 DIIYSERRF-VEVKAPGIIPRKSVHEPVQTGIKCIDSLVPIGRGQREVIIGDRQTGKTAL 219

Query: 178 LSMFARSDCFDK------------VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
           +     +  +               I   +G++   V + ++     D L  +++V AT+
Sbjct: 220 IIDTILNQKYSYYNSKIEDKDKMYCIYVAIGQKRSTVAQIVKLLEKNDALNYTIIVAATA 279

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP T   + E+F   G + ++  D +++ A + R+++      P    YP 
Sbjct: 280 SDPAPLQFLAPYTGCAMGEWFRDNGKHCIIFYDDLSKQAVAYRQMSLLLRRPPGREAYPG 339

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            +F    RLLER      E   G++TA+  +     + +  I  ++ SI DG I+L+  L
Sbjct: 340 DIFYIHSRLLERAAKMSDERGGGSLTAIPVIETQAGDMSSYIPTNIISITDGQIMLDSEL 399

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++ +SL   + ++ E   +     +   +D  
Sbjct: 400 FYKGIRPAINVGLSVSRVGSAAQLKSVKQVSNSLKLNLAQYRE---VAAFSQFGSDLDES 456

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             K + +   + + LKQ  
Sbjct: 457 TKKLLTRGSTLTEILKQKQ 475


>gi|326909387|ref|YP_004327656.1| ATP synthase CF1 alpha subunit [Hevea brasiliensis]
 gi|308523501|gb|ADO33551.1| ATP synthase CF1 alpha subunit [Hevea brasiliensis]
          Length = 507

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|327399350|ref|YP_004340219.1| ATPase, FliI/YscN family [Hippea maritima DSM 10411]
 gi|327181979|gb|AEA34160.1| ATPase, FliI/YscN family [Hippea maritima DSM 10411]
          Length = 434

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 172/429 (40%), Positives = 246/429 (57%), Gaps = 7/429 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           + L         NL+V  G I  +  +    T   + V +GD    +        +V+  
Sbjct: 3   DILKLKRVIDGSNLIVTYGRIKKVAGITIKSTGP-KNVKIGDVCKIETDEGWIDSEVVGF 61

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + D V + P+G+ + +    LV   GR   +  S    GRV+NALG+PIDG   +   + 
Sbjct: 62  DEDGVVLMPLGVLDGVKSLSLVKSEGRGLSVPVSERLLGRVVNALGRPIDGKGPIPVEEY 121

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                  V P + RQ +++    G++ ID    +  GQR+G+FAGSG+GKSTLL M AR+
Sbjct: 122 YPVYPKPV-PPLERQIIKEPLSLGVKAIDGLLTIGKGQRVGIFAGSGVGKSTLLGMIARN 180

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+L+GERGREVREFI  D   + LK+SVVVVATSDE+ +LR+     A +IAE
Sbjct: 181 SSADVNVIALIGERGREVREFIERDLKEEGLKRSVVVVATSDEASLLRREGAFVATSIAE 240

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           +F  +G NV+L++DS TRFA + REI    GE P  +GY  SVF+ LPRL+ER G   K 
Sbjct: 241 FFKDRGANVMLMMDSATRFAMAQREIGLAVGEPPTTKGYTPSVFTLLPRLMERAGNFNK- 299

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA+ +VLVDGD+  +PIAD+ RSILDGHIVL+R +AE GRYP VD L S+SRL   
Sbjct: 300 -GSITAIYTVLVDGDDLMEPIADASRSILDGHIVLSRKIAERGRYPAVDVLRSISRLMSS 358

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + + K+L   +  ++  + +  D+  IG Y  G +  +D+A+  +  +  FL Q   +
Sbjct: 359 ITTDEHKELALKIRKVLSVYADAEDLINIGAYVKGSNKDIDEAIKYIDKVEGFLAQKIEE 418

Query: 424 -LSSEDVFQ 431
             S ED   
Sbjct: 419 SFSFEDTLN 427


>gi|281190719|ref|YP_003330956.1| ATP synthase CF1 alpha subunit [Parthenium argentatum]
 gi|269924832|gb|ACZ52705.1| ATP synthase CF1 alpha subunit [Parthenium argentatum]
          Length = 508

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  Q      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFQEG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|332673932|gb|AEE70749.1| ATP synthase F1 sector alpha subunit [Helicobacter pylori 83]
          Length = 503

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIRATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|118474260|ref|YP_892661.1| F0F1 ATP synthase subunit alpha [Campylobacter fetus subsp. fetus
           82-40]
 gi|158512510|sp|A0RR28|ATPA_CAMFF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118413486|gb|ABK81906.1| ATP synthase F1, alpha subunit [Campylobacter fetus subsp. fetus
           82-40]
          Length = 505

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y+ ++ + + G + S+      V  L + V  G+ V  +       G  + 
Sbjct: 12  SIIKERIENYNLSVDIEETGKVISVADGVANVYGL-KNVMAGEMVEFETGEK---GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G    I  G  V   G+  R+       GRV+NALG+PID   ++   +
Sbjct: 68  LEESSVGIVVLGKSSSIKEGSSVKRLGKLLRVPVGDALIGRVVNALGEPIDAKGAIEATE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K    M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-IEEKAKGIMARKSVHEPLQTGIKAIDGLVPIGRGQRELIIGDRQTGKTTVAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++          ++VV A++ ++P L+ +AP   VT
Sbjct: 187 NQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMDYTIVVNASASDAPALQYLAPYAGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF     + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERASKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 SDKLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGSAQIKAIKKVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLERGQRMVEVLK 423

Query: 419 QSPSDLSSED 428
           Q P      +
Sbjct: 424 QPPYSPLPVE 433


>gi|317055017|ref|YP_004103484.1| ATP synthase F1 subunit alpha [Ruminococcus albus 7]
 gi|315447286|gb|ADU20850.1| ATP synthase F1, alpha subunit [Ruminococcus albus 7]
          Length = 504

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 181/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + +  L +   KN   +      G + ++      V  L + +  G+ +  +   
Sbjct: 1   MNLRPDEITGLIKSQIKNYRTKLVLDDVGTVCTVGDGISRVNGLEKCMS-GELLEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E I  G  V   GR   +       GRV+NALG PID
Sbjct: 59  --TYGMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGEAMLGRVVNALGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   + +  + S     + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGAILTNE-TRPVESPAFGIITRKSVNRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           +T+      +        I   +G++   V   ++     D +  S+VV AT+ E   L+
Sbjct: 176 TTIALDTIINQKGKNVICIYVAIGQKISTVANIVDTLTKNDAMDYSIVVSATASEMAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  +G +VL + D +++ A + R ++           YP  VF    
Sbjct: 236 YIAPYAGVAMAEYFMLQGKDVLCVYDDLSKHAVAYRTMSLLLKRPTGREAYPGDVFYLHS 295

Query: 292 RLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACCLNEDNGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETELFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+   L  L  ++ E +       +   +D      + Q
Sbjct: 356 AVNPGISVSRVGGSAQIKAMKKVSGPLKLLYSQYRELQ---SFSQFGSDLDQDTKDRLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQS +
Sbjct: 413 GERIVEVLKQSKN 425


>gi|94502485|ref|YP_588111.1| ATP synthase CF1 alpha subunit [Helianthus annuus]
 gi|118573477|sp|Q1KXW5|ATPA_HELAN RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|88656889|gb|ABD47140.1| ATP synthase CF1 alpha subunit [Helianthus annuus]
          Length = 508

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  Q      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFQEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGDGLLIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISSSEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|317009746|gb|ADU80326.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori India7]
          Length = 503

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|258517236|ref|YP_003193458.1| F0F1 ATP synthase subunit alpha [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780941|gb|ACV64835.1| ATP synthase F1, alpha subunit [Desulfotomaculum acetoxidans DSM
           771]
          Length = 501

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 175/432 (40%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +           V   G +  +      V  L   +   + +   G  
Sbjct: 1   MNLRPEEISSIIKQQIDKYQAQVEVTSVGSVIQVGDGIARVYGLEDCMS-NELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G  + +  D +    +G    I  GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --TMGMALNLEEDNIGCVILGPYTHIKEGDPVKRTGRIISVPVGPELIGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTDKYRSIERIAPGVVTRKSVNQPMQTGIKAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +     V  I   VG++   V   ++          S+VV AT+ E   L 
Sbjct: 176 TAIAVDTIINQKGQNVVCIYVAVGQKNSTVANVVQILSDHGAMDYSIVVSATASEPSPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + E F   G +VL+I D +++ A + RE++      P    +P  VF    
Sbjct: 236 YIAPYSGCAMGEEFMENGKDVLIIYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLNDDYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFMSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A +   KK+  +L   + ++ E   +     +   +D +    + +
Sbjct: 356 AVNVGLSVSRVGGAAQTKAMKKVAGTLRLDLAQYRE---LAAFAQFGSDLDKVTQSRLAR 412

Query: 410 VPIIYDFLKQSP 421
                + LKQ+ 
Sbjct: 413 GQRTTEVLKQNQ 424


>gi|139389081|ref|YP_001123799.1| ATP synthase CF1 alpha subunit [Nasturtium officinale]
 gi|190358185|sp|A4QLR8|ATPA_NASOF RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134287004|dbj|BAF50623.1| ATPase alpha subunit [Nasturtium officinale]
          Length = 504

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADAPAALQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|119386523|ref|YP_917578.1| F0F1 ATP synthase subunit alpha [Paracoccus denitrificans PD1222]
 gi|158512595|sp|A1B8N8|ATPA_PARDP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119377118|gb|ABL71882.1| ATP synthase F1 subcomplex alpha subunit [Paracoccus denitrificans
           PD1222]
          Length = 511

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 105/446 (23%), Positives = 181/446 (40%), Gaps = 28/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L + V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQDAEVAEVGQVLSVGDGIARVYGLDK-VQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G V+ +  D V +   G   +I  GD V   G     P      GRV++ALG PID
Sbjct: 59  --IRGMVLNLETDNVGVVIFGDDRDIKEGDTVKRTGAIVEVPAGKELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +  +    K P  M R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPLNASERRIA-DVKAPGIMPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVA 222
           + +      +                 I   VG++   V + ++          + VV A
Sbjct: 176 TAIALDTILNQANYNGREADGMKTLHCIYVAVGQKRSTVAQLVKKLEETGAMAYTTVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP +A  + EYF   G + L+I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYLAPYSATAMGEYFRDNGMDALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     +  G  ++TA+  +     + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSAKLNEANGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D
Sbjct: 356 ELFFQGIRPAVNTGLSVSRVGSAAQTKAMKSVAGPVKLELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
               K +++   + + +KQ      +
Sbjct: 413 AATQKLLNRGARLTELMKQPQYSPLT 438


>gi|126665012|ref|ZP_01735995.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17]
 gi|126630382|gb|EBA00997.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17]
          Length = 479

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 156/416 (37%), Positives = 238/416 (57%), Gaps = 7/416 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++ +     T+ C+   + +GD  V Q + S  +  +V+    + VY+ P+   E + 
Sbjct: 42  GRLTRMVG--LTLECVGVPMVVGDRCVIQSQGSSVVEAEVVGFEDEKVYLMPLTAIEGLR 99

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G LV       R+       GRV++  G+P+DG   L   +  + +   +   +NR  V
Sbjct: 100 PGALVVPLSSTSRVPVGNQLLGRVVDGSGEPLDGKGPL-HAEARVSLSGDIINPLNRAPV 158

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGRE
Sbjct: 159 RQPMDVGIRAINALLTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADVTVVGLIGERGRE 218

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V+EFIED LG+  L +SVVV + +D+SP++R  A +    IAE++  +G  VLL++DS+T
Sbjct: 219 VKEFIEDILGEEGLARSVVVASPADDSPLMRLRAAMLTTRIAEFYRDQGKRVLLLMDSLT 278

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + REIA   GE P  +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+ 
Sbjct: 279 RYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQ 338

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPIAD+ R+ILDGHIVL+R LAEEG YP +D  AS+SR+  +    +          + 
Sbjct: 339 QDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTEPEHFARAQRFKQVY 398

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435
            R+++ RD+  +G Y  G D   D A+  +  +  FLKQ  S+ +S  D  +++  
Sbjct: 399 SRYQQARDLISVGAYVKGSDPETDFAIAHIANMRQFLKQGLSEKTSLNDSVEQLLA 454


>gi|61219459|gb|AAX40636.1| HrpB6 [Xanthomonas oryzae pv. oryzicola]
          Length = 486

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 165/430 (38%), Positives = 241/430 (56%), Gaps = 12/430 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 58  RELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 115

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +       GRV++ LG+P DG  ++   D  + I
Sbjct: 116 ALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPI 174

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 175 QAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 234

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 235 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 294

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 295 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGES--GSI 352

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 353 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 412

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
              +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL Q    LS  
Sbjct: 413 YHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSD- 471

Query: 428 DVFQEITKKL 437
             ++   ++L
Sbjct: 472 --YESTLEQL 479


>gi|14916970|sp|P92549|ATPAM_ARATH RecName: Full=ATP synthase subunit alpha, mitochondrial
          Length = 507

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +  G   GK
Sbjct: 119 GKGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + + LKQ  
Sbjct: 415 AATQALLNRGARLTEVLKQPQ 435


>gi|290490188|gb|ADD31501.1| ATP synthase CF1 alpha subunit protein [Ximenia americana]
          Length = 507

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 184/423 (43%), Gaps = 15/423 (3%)

Query: 7   TLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + +
Sbjct: 12  VIRERIEQYNREVKIVNTGIVLQVGDGIARIHGLDE-VMTGELVEFEEG---TIGIALNL 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   + 
Sbjct: 68  ESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSESYLGRVINALAKPIDGRGEISASES 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFA 182
            + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +  +  
Sbjct: 128 RL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAIATDTILN 186

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTI 241
           +       +   +G++   V + +  +        ++VV  T+D    L+ +AP T   +
Sbjct: 187 QQSQNVICVYVAIGQKASSVAQVVTTFQEKGTMEYTIVVAETADSPATLQYLAPYTGAAM 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +  +  ++ D +++ A + R+++      P    YP  VF    RLLER   S 
Sbjct: 247 AEYFMYRERHTSIVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSS 306

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR
Sbjct: 307 SRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++       + +F E         +   +D      + +   + + LKQ
Sbjct: 367 VGSAAQIKAMKQVAGKFKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQ 423

Query: 420 SPS 422
           S S
Sbjct: 424 SQS 426


>gi|86151432|ref|ZP_01069647.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315123707|ref|YP_004065711.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841779|gb|EAQ59026.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315017429|gb|ADT65522.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 501

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +  +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVINANEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|11497478|ref|NP_042268.1| H(+)-transporting ATPase, subunit 1 [Prototheca wickerhamii]
 gi|467869|gb|AAD12656.1| H(+)-transporting ATPase, subunit 1 [Prototheca wickerhamii]
          Length = 509

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAED-----YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  +L  ++ L E      YSK  V + G + S+      +  L + +  G+ V      
Sbjct: 1   MALSLSEISILLEQKISNTYSKINVDEVGRVLSVGDGIARIYGL-KKIQAGEMVEFA--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPID 114
           S   G  + +  D V +   G    IS GDLV   G     PS     GRV++ LG PID
Sbjct: 57  SGVKGMALNLENDNVGVVLFGSDSSISEGDLVKRTGTIVDVPSGKGVLGRVLDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L K    +    K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPL-KDVTRVRAELKAPGIIVRESVNQPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +      +  F             +   +G++   V + ++          +V+V AT
Sbjct: 176 TAIALDAIINQKFVNVSKDESAKLYCVYVAIGQKRSTVAQIVKTLEDAGALDYTVIVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ + + R+++      P    +P
Sbjct: 236 ASDPAPLQYLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER          G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMSSAVGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  ++   + ++ E   +     +   +D 
Sbjct: 356 LFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
                +++   + + LKQ   
Sbjct: 413 STQYLLNRGARLTEILKQGQF 433


>gi|11769|emb|CAA23471.1| alpha subunit of ATPase [Nicotiana tabacum]
 gi|225270|prf||1211235E ATPase alpha
          Length = 507

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    Y   VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYLGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|258593694|emb|CBE70035.1| ATP synthase subunit alpha, membrane-bound, F1 sector [NC10
           bacterium 'Dutch sediment']
          Length = 508

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 174/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E + Q    Y   + V + G +         +  L +    G+ +       D  G V+ 
Sbjct: 11  EIIKQQLAGYEALVDVAEVGTVIEAGDGIARIYGLEK-AMAGELLEFP---HDVFGMVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GDLV   GR   +       GRV+NALG PIDG   +   +
Sbjct: 67  LEEDNVGAVLLGEAEAIREGDLVKRTGRIASVPVGEALVGRVVNALGLPIDGKGPIDATE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L   I    P  ++R+ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 127 LR-PIERLAPGVVDRRPVKEALQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAVAIDAII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V + ++          + VV AT+ E   L+ +AP     
Sbjct: 186 NQKGKDVFCVYVAVGQKRSTVAQVVKTLEEAGAMAYTTVVAATASELAPLQYIAPYAGCA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G + L I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IGEYFRDSGRHSLCIYDDLSKHAQAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERGAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 306 NDDLGGGSLTALPIIETQLGDVSAYIPTNVISITDGQIYLETDLFFAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     +++   L   + ++ E   +     +   +D      +++   + + LK
Sbjct: 366 RVGGSAQIKAMRQVAGKLRLDLAQYRE---MAAFAQFGSELDKATQAQLNRGARMVEVLK 422

Query: 419 QSP 421
           Q  
Sbjct: 423 QGQ 425


>gi|255321977|ref|ZP_05363127.1| ATP synthase F1, alpha subunit [Campylobacter showae RM3277]
 gi|255301081|gb|EET80348.1| ATP synthase F1, alpha subunit [Campylobacter showae RM3277]
          Length = 505

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 180/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E++S N+ V + G + S+      V  L + V  G+ V  +       G  + 
Sbjct: 12  AIIKERIENFSLNVDVNETGKVISVADGVANVYGL-KNVMAGEMVEFENGEK---GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  + I  G  V    +  R+       GRV+N+LG+PID    +   +
Sbjct: 68  LEESSVGIVILGKTDGIKEGSSVKRLAKLLRVPVGDALIGRVVNSLGEPIDAKGPIEASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K    M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-VEEKAKGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++          ++VV A + ++  L+ +AP   VT
Sbjct: 187 NQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMEYTIVVNAGASDAAALQYLAPYAGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF     + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERASKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDKLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLERGQRMVEVLK 423

Query: 419 QSP 421
           Q P
Sbjct: 424 QPP 426


>gi|290490204|gb|ADD31509.1| ATP synthase CF1 alpha subunit protein [Liquidambar styraciflua]
          Length = 507

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREIKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               V+     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVVCVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|91208887|ref|YP_538920.1| ATP synthase CF1 alpha subunit [Gossypium hirsutum]
 gi|110832063|sp|Q2L8Z1|ATPA_GOSHI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|85687401|gb|ABC73613.1| ATP synthase CF1 alpha subunit [Gossypium hirsutum]
          Length = 507

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 186/422 (44%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|197124866|ref|YP_002136817.1| F0F1 ATP synthase subunit alpha [Anaeromyxobacter sp. K]
 gi|226739842|sp|B4UKF2|ATPA_ANASK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|196174715|gb|ACG75688.1| ATP synthase F1, alpha subunit [Anaeromyxobacter sp. K]
          Length = 510

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 102/421 (24%), Positives = 181/421 (42%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  +DY K + V + G I S       +  L+     G+ +   G      G V+ + 
Sbjct: 12  IREQIKDYGKKVEVAETGSILSQADGVARIYGLAGAAA-GELLEFPGG---VRGLVLNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G  E I  GD V   G    +       GRV++ LG PIDG   L      
Sbjct: 68  EDNVGAAIMGPYEHIREGDPVKRTGLIAEVPVGEELLGRVVDGLGNPIDGRGPLN-AKHH 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
            +I  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +      ++
Sbjct: 127 RKIEIKAPGIVKRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAIDTILNN 186

Query: 186 CFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             +        +G++   V   ++          + V+ A++ +   ++ +AP T VT+A
Sbjct: 187 KGNNLYCFYVAIGQKQSTVARVVDTLKKYGAMEYTTVISASASDPAPMQYLAPYTGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 247 EYFRDSGRHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           ++G  ++TA+  +     + +  I  +V SI DG I L  +L  +G  P ++   SVSR+
Sbjct: 307 KEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESNLFYQGVRPAINVGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  SL   + ++ E   +     +   +D    + + +   + + LKQ 
Sbjct: 367 GGSAQIKAMKQVAGSLKLDLAQYRE---LAAFAQFGSDLDKATQETLARGERLVELLKQG 423

Query: 421 P 421
            
Sbjct: 424 Q 424


>gi|225849746|ref|YP_002729980.1| F0F1 ATP synthase subunit alpha [Persephonella marina EX-H1]
 gi|225645951|gb|ACO04137.1| ATP synthase F1, alpha subunit [Persephonella marina EX-H1]
          Length = 504

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 104/425 (24%), Positives = 178/425 (41%), Gaps = 14/425 (3%)

Query: 5   LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE L +  E++  K  + + G +  +      V  L +    G+ V  +      LG   
Sbjct: 10  LEGLKKQLEEFEAKANLEEVGMVLQVGDGVARVFGLEK-AMYGEMVEFENG---KLGVAF 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +  +G    I  G +V   G+   +       GRV++  GKPIDG   +   
Sbjct: 66  NLEEDNVGVILLGDETGIEEGTIVKRTGKILEVPVGMGLVGRVVDGTGKPIDGKGPIENI 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+     
Sbjct: 126 AYYSPVEKIAPGVVTRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTVAIDTI 185

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G++   VR+ +E          + VV AT+ +   ++ +AP    
Sbjct: 186 LNQKGEDVYCVYVAIGQKRAVVRQIVETLQKHGAMEYTTVVAATASDPATMQYIAPFVGC 245

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAEYF   G + L+I D +T+ A++ R+++      P    YP  VF    RLLER   
Sbjct: 246 TIAEYFRDNGMHALIIYDDLTKHAYAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAK 305

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              +   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++   SV
Sbjct: 306 LNDDLGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFHKGIRPAINVGLSV 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + +F E         +   +D      + +   + + L
Sbjct: 366 SRVGGAAQIKAMKQVAGTLRLELAQFRELE---AFVQFASELDKATQAQIARGQRLVELL 422

Query: 418 KQSPS 422
           KQ P+
Sbjct: 423 KQPPN 427


>gi|300853449|ref|YP_003778433.1| F1Fo ATPase subunit alpha [Clostridium ljungdahlii DSM 13528]
 gi|300433564|gb|ADK13331.1| F1Fo ATPase, subunit alpha [Clostridium ljungdahlii DSM 13528]
          Length = 504

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 181/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + +D  +        V  G I  I      V  L+Q     + +      
Sbjct: 1   MNIKPEEITSIIKDEIQKYEKKIETVDSGTIIQIGDGIARVYGLNQ-CMANELLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G  + +  D V    +G  + I  GD V   GR   +       GRV+N+LG+PID
Sbjct: 58  -DVYGMALNLEQDNVGCVLLGSQKGIKEGDTVKRTGRVVEVPVGEAIVGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  +    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIKTSE-TRPVDLVAPGVITRQSVKEPLQTGLKAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   + D         S++V A++ ES  L+
Sbjct: 176 TAIAMDTIINQKGKDVICIYVAIGQKQSTVAHIVNDLTEAGAMDYSIIVSASASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF +KG +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFMNKGKDVLIVYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     +    I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAAKLSDKLGGGSLTALPIIETMAGDVTAYIPTNVISITDGQIFLESELFYAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D    K + +
Sbjct: 356 AINAGISVSRVGGNAQIKAMKQVAGTLRLDLAQYRE---LASFAQFGSDLDKESMKRLEK 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GKRLTEILKQPQ 424


>gi|253579149|ref|ZP_04856419.1| ATP synthase subunit alpha [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849247|gb|EES77207.1| ATP synthase subunit alpha [Ruminococcus sp. 5_1_39BFAA]
          Length = 509

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 113/433 (26%), Positives = 185/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++     K         + G I  +       + L   +  G+ +  +  +
Sbjct: 1   MQLKPEEISKVIRSQIKYYENAIQQNETGTILMVGDGIARASGLVNCMS-GELLEFEDGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I   G  E I  G  V   G+   +       GRV+NALG+PID
Sbjct: 60  ---FGMAQNLEENSVSIVIFGSDENIGEGQTVKRTGKVVSVPVGDAMVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I SK P    R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPIDTKEFR-PIESKAPGICERRSVYQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+ +    +        I   +G++   V   +E+   +     ++VV AT+ ES  L+
Sbjct: 176 TTIATDTIINQKGKDVICIYVAIGQKRSTVATLVENLTRNGAMDYTIVVAATASESSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF +KG +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFMNKGKDVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLDDEHGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGDAQIKAMKKVAGTLKLIYSQYRELQSFAQFG---SDLDADTKARLEQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ+ +
Sbjct: 413 GARIVEVLKQNQN 425


>gi|149390525|ref|YP_001294169.1| ATP synthase CF1 alpha subunit [Buxus microphylla]
 gi|190358241|sp|A6MM21|ATPA_BUXMI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|146762270|gb|ABQ45234.1| ATP synthase CF1 alpha subunit [Buxus microphylla]
          Length = 507

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEGYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|57237112|ref|YP_178124.1| F0F1 ATP synthase subunit alpha [Campylobacter jejuni RM1221]
 gi|86149645|ref|ZP_01067875.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597664|ref|ZP_01100897.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148926905|ref|ZP_01810583.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414418|ref|YP_001481674.1| F0F1 ATP synthase subunit alpha [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205356480|ref|ZP_03223244.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561786|ref|YP_002343565.1| F0F1 ATP synthase subunit alpha [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|81557622|sp|Q5HX61|ATPA_CAMJR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81788945|sp|Q9PJ21|ATPA_CAMJE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|172046990|sp|A8FJR0|ATPA_CAMJ8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|57165916|gb|AAW34695.1| ATP synthase F1, alpha subunit [Campylobacter jejuni RM1221]
 gi|85839913|gb|EAQ57172.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88189968|gb|EAQ93944.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359492|emb|CAL34276.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145844482|gb|EDK21590.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385382|gb|ABV51697.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205345667|gb|EDZ32306.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|284925398|gb|ADC27750.1| F0F1 ATP synthase subunit alpha [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|307747062|gb|ADN90332.1| ATP synthase subunit alpha [Campylobacter jejuni subsp. jejuni M1]
 gi|315057545|gb|ADT71874.1| ATP synthase alpha chain [Campylobacter jejuni subsp. jejuni S3]
 gi|315928861|gb|EFV08124.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           305]
 gi|315931499|gb|EFV10466.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           327]
          Length = 501

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +  +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVINANEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|32480828|ref|NP_862739.1| ATP synthase CF1 alpha subunit [Calycanthus floridus var. glaucus]
 gi|75297121|sp|Q7YJY4|ATPA_CALFG RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|32399364|emb|CAD28706.1| ATPase alpha subunit [Calycanthus floridus var. glaucus]
          Length = 507

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 103/421 (24%), Positives = 182/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLTIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKAAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               V+     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVVCVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 PLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|114408|sp|P05492|ATPAM_OENBI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|13165|emb|CAA27656.1| unnamed protein product [Oenothera biennis]
          Length = 511

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 181/439 (41%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRITNFYTNFQVDEIGRVISVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +LG  +    +  KVP  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALGDHE-RRRVEVKVPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
           +      +                 +   +G++   V + ++    G+ L+ S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + + LKQ  
Sbjct: 417 TQALLNRGARLTEILKQPQ 435


>gi|212702678|ref|ZP_03310806.1| hypothetical protein DESPIG_00706 [Desulfovibrio piger ATCC 29098]
 gi|212673950|gb|EEB34433.1| hypothetical protein DESPIG_00706 [Desulfovibrio piger ATCC 29098]
          Length = 438

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 161/440 (36%), Positives = 244/440 (55%), Gaps = 14/440 (3%)

Query: 5   LETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LG 60
            E +  L E+     N +   G +  +      +  +   V +G+  + +    D     
Sbjct: 3   FEYIGDLLEEAVRDVNPLETRGRVEQVVGTI--IRAVVPGVKVGELCLLRNPWEDWSLKA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+    ++  + P+G  + IS    V   G    +       GRV++ LG+ +DG  ++
Sbjct: 61  EVVGFVRNVALLSPLGNMQGISPATEVIPTGEILSVPVGYELLGRVVDGLGQAMDGGPAI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +      ++++ P  M R+ + K    G+RVID       GQR+G+FA +G GKSTLLS
Sbjct: 121 -RTRTHYPLVAEAPNPMTRKVISKPISLGLRVIDGVLTCGEGQRMGIFAAAGGGKSTLLS 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
              +    D  +++L+GERGREVREFIE  +G +  KK+V+VV+TSD S + R  A  TA
Sbjct: 180 SILKGCTADVCVLALIGERGREVREFIERDIGPEGRKKAVLVVSTSDRSSMERLKAAYTA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G +VLL++DS+TRF  + REI   +GE P  RG+P SVFSELP+L+ER G
Sbjct: 240 TAIAEYFRDQGKSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSELPKLMERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S+K  G+ITA+ +VLV+GD+  +PIAD  RSILDGHIVL+R LA    YP +D  ASVS
Sbjct: 300 NSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +     + K    +L  ++ ++ E   +  IG Y+ G D   D A+  +  +  FL+
Sbjct: 358 RVMNAVVDKEHKAAAQALRKILAKYAEVELLVQIGEYKKGADAEADFALGHIQAVNAFLR 417

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q   + SS   F+E    L+
Sbjct: 418 QGLEEKSS---FEETLAALK 434


>gi|254459061|ref|ZP_05072484.1| ATP synthase F1, alpha subunit [Campylobacterales bacterium GD 1]
 gi|207084332|gb|EDZ61621.1| ATP synthase F1, alpha subunit [Campylobacterales bacterium GD 1]
          Length = 505

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 191/438 (43%), Gaps = 19/438 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++   N      + + G I S       V  L+  V  G+ V     + 
Sbjct: 4   KIQADEISSIIKERIDNFELSVDINETGKIVSYADGVAQVYGLN-NVMAGEMVEF---DE 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G V+ +   +V +  +G+G E+  G  V   GR  ++       GRV+NALG+PIDG
Sbjct: 60  GTRGLVMNLEESVVGVVILGLGTELKEGMSVKRLGRLLKVPVGDALLGRVVNALGEPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +    +  K P  M+R+ V +   TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGPIETTETRF-VEEKAPGIMDRKSVHEPLATGIKAIDALVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           T+      +   +    I   +G++   V + I         + +++V +T+ E+  L+ 
Sbjct: 179 TVALDAIINQKGNGVICIYVAIGQKESTVAQIIRRLEEHGALEYTIIVSSTAAEAAALQF 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    R
Sbjct: 239 LAPYTGVTMGEYFRDNARHGLIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYIHSR 298

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EKG  ++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERAAKVSDEKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNSGVRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D      + + 
Sbjct: 359 INVGLSVSRVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFAQFASDLDETSRNQLERG 415

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ P    S +
Sbjct: 416 QRMVEVLKQGPFSPLSAE 433


>gi|283955549|ref|ZP_06373044.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283793010|gb|EFC31784.1| ATP synthase F1 sector alpha subunit [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 501

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +  +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVINANEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMGYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|228017369|gb|ACP52186.1| ATP synthase CF1 alpha subunit [Larix occidentalis]
 gi|307683505|dbj|BAJ19731.1| ATP synthase CF1 alpha chain [Larix decidua]
          Length = 507

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 180/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ +         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIYGLDE-VMAGELLEF---GDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLTIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSLLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|90421700|ref|YP_530070.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris BisB18]
 gi|119367962|sp|Q21CY5|ATPA_RHOPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|90103714|gb|ABD85751.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris BisB18]
          Length = 510

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 180/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGIVIFGADREIKEGQTVKRTRAIVDTPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQSTE-RKRVDVKAPGIIPRKSVNEPMATGLKAIDALIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V +F++        + S+VV A
Sbjct: 176 TAIALDTILNQKPLNVEGAPEGQKLYCVYVAIGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ G+   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNEDHGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGSRLTELLKQPQF 434


>gi|332702725|ref|ZP_08422813.1| ATP synthase subunit alpha [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332552874|gb|EGJ49918.1| ATP synthase subunit alpha [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 502

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ E   +N   Q      G + S+      V  + Q     + +   G  
Sbjct: 1   MQIKAEEISQIIESQIENYQAQVEMSETGTVLSVGDGIARVYGV-QNAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    I+ GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --VMGMVLNLEEDNVGVAILGEDTGINEGDPVKRTGKIFSVPVGDAVMGRVLNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L    L+  +  K P  + R+ V +   TG++ ID  TP+  GQR  +      GK
Sbjct: 117 GMGPLD-TKLTSPVEIKAPGIVARKSVHEPMYTGLKAIDAMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ +         +G++   V    +          + ++ AT+ +   L+
Sbjct: 176 TAVCIDAILAQKNSDIHCFYVAIGQKKASVALVADVLRRHGAMEYTTIISATASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+AE++ + G + L+I D +++ A + R+++      P    +P  VF    
Sbjct: 236 FIAAYAGATMAEFYRNNGKHALIIYDDLSKQATAYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVSDDLGAGSMTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +    G+   +D    + +++
Sbjct: 356 AINVGLSVSRVGGAAQVKAMKQVAGTLRLDLAQYRE---LAAFAGFGSDLDKATQQKLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 413 GARMVELLKQPQYQPLPVE 431


>gi|290490198|gb|ADD31506.1| ATP synthase CF1 alpha subunit protein [Ficus sp. Moore 315]
          Length = 507

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + ++  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKILNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLIIQEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYREQHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|167391790|ref|YP_001671668.1| ATP synthase CF1 alpha subunit [Carica papaya]
 gi|190358243|sp|B1A920|ATPA_CARPA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|166344117|gb|ABY86767.1| ATPase alpha subunit [Carica papaya]
          Length = 505

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVVTIGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMDYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F     + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EFFMYLKQHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|139387237|ref|YP_001123358.1| ATP synthase CF1 alpha subunit [Capsella bursa-pastoris]
 gi|190358242|sp|A4QKH7|ATPA_CAPBU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286558|dbj|BAF50182.1| ATPase alpha subunit [Capsella bursa-pastoris]
          Length = 507

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V     +   +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEF---DEGTIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADAPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|212703960|ref|ZP_03312088.1| hypothetical protein DESPIG_02013 [Desulfovibrio piger ATCC 29098]
 gi|212672663|gb|EEB33146.1| hypothetical protein DESPIG_02013 [Desulfovibrio piger ATCC 29098]
          Length = 502

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 97/435 (22%), Positives = 182/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ ED  KN        + G +  +      V  + Q     + +   G  
Sbjct: 1   MQIKAEEISKIIEDQIKNYEQRVEMSETGTVLYVGDGIARVYGV-QNAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --VMGMVLNLEEDNVGVALLGSDVGIKEGDPVKRTGKIFSVPVGDKVMGRVLNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++   +  K P  + R+ V +   TG++ ID  TP+  GQR  +      GK
Sbjct: 117 GLGPVEAEEVR-PVEIKAPGIIARKSVHEPMPTGLKAIDAMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ +         +G++   V    +          + ++ AT+ +   L+
Sbjct: 176 TAVCIDAILAQKETDIHCFYVAIGQKKASVALVADTLRKHGAMEYTTIISATASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A  T  T+AEY+   G + L+I D +++ A   R+++      P    +P  VF    
Sbjct: 236 YIAAYTGCTMAEYYRDNGKHALIIYDDLSKQAVGYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVSDKLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKAKLER 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GARLVELLKQPQYQP 427


>gi|5811566|dbj|BAA83611.1| F1F0-ATPase alpha subunit [Desulfovibrio vulgaris]
          Length = 488

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 185/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ E+  ++        + G + S+      V  + +     + +   G  
Sbjct: 1   MQIKAEEISKIIEEQIQSYEQRVEMSETGTVLSVGDGIARVYGV-RNAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --LMGMVLNLEEDNVGVALLGEDTGIKEGDPVKRTGKIFSVPVGDEVMGRVLNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +    +  K P  + R+ V +   TGI+ ID  TP+  GQR  +      GK
Sbjct: 117 GLGPLEAKEFR-PVELKAPGIIARKSVHQPMPTGIKAIDAMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ D   +     +G++   V    +          + ++ AT+ E   L+
Sbjct: 176 TAVCIDAILAQRDTGIRCFYVAIGQKKATVALVADTLRKHGAMEYTTIISATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +  T+AE++  KGD+ L+I D +++ A   R+++      P    YP  VF    
Sbjct: 236 FISAYSGCTMAEFYRDKGDHALIIYDDLSKQAVGYRQMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVNDSLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E   +     +   +D    + + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKATKQKLDR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GARLVELLKQPQYQP 427


>gi|126655520|ref|ZP_01726959.1| ATP synthase subunit A [Cyanothece sp. CCY0110]
 gi|126622999|gb|EAZ93704.1| ATP synthase subunit A [Cyanothece sp. CCY0110]
          Length = 503

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 100/424 (23%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    E Y +++ V   G +  +      +  L Q    G+ +  +      +G  + 
Sbjct: 11  SIIRDQIESYDQSVQVSNVGTVLQVGDGTARIYGLEQ-CMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  G  V   G+  ++       GRV+++LG+PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGTGLDIQEGSTVQATGKIAQVPVGDAMVGRVVDSLGRPIDGKGDINTSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESPAPGIIARKSVCEPMQTGITAIDAMIPIGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + I           ++VV A +++   L+ +AP T  T
Sbjct: 186 NQKSEDVICVYVAIGQKASTVAQVIGTLEEKGAMDYTIVVAANANDPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKATLVIYDDLSKQAQAYRQLSLLLKRPPGREAYPGDVFYIHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   +   LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQAQLARGQRLRQILK 422

Query: 419 QSPS 422
           Q  +
Sbjct: 423 QPEN 426


>gi|295137014|ref|YP_003587561.1| ATP synthase CF1 alpha subunit [Pisum sativum]
 gi|114522|sp|P08215|ATPA_PEA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|12143|emb|CAA29352.1| atpA protein [Pisum sativum]
 gi|293338586|gb|ADE43559.1| ATP synthase CF1 alpha subunit [Pisum sativum]
          Length = 501

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L   V  G+ V  +      +G  + 
Sbjct: 11  QIIRKRIEQYNTEVKIVNTGTVLQVGDGIARIYGLDD-VMAGELVEFKEG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISTSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNLVCVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER+   
Sbjct: 246 LAEYFMYRERHTLIIYDDPSKHAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERVAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|223038636|ref|ZP_03608929.1| ATP synthase F1, alpha subunit [Campylobacter rectus RM3267]
 gi|222880038|gb|EEF15126.1| ATP synthase F1, alpha subunit [Campylobacter rectus RM3267]
          Length = 505

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 180/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E++S N+ V + G + S+      V  L + V  G+ V  +       G  + 
Sbjct: 12  AIIKERIENFSLNVDVNETGKVISVADGVANVYGL-KNVMAGEMVEFENGEK---GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  + I  G  V    +  R+       GRV+N+LG+PID    +   +
Sbjct: 68  LEESSVGIVILGKTDGIKEGSSVKRLAKLLRVPVGDALIGRVVNSLGEPIDAKGPIEASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K    M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-VEEKAKGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++          ++VV A + ++  L+ +AP   VT
Sbjct: 187 NQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMEYTIVVNAGASDAAALQYLAPYAGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF     + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERASKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDKLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLERGQRMVEVLK 423

Query: 419 QSP 421
           Q P
Sbjct: 424 QPP 426


>gi|284051759|ref|ZP_06381969.1| F0F1 ATP synthase subunit alpha [Arthrospira platensis str. Paraca]
          Length = 505

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 186/434 (42%), Gaps = 17/434 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +    E Y +++ V   G +  +      +  L +    G+ +         +G  + + 
Sbjct: 13  IKDQIEQYGQDVKVSNVGTVLQVGDGIARIYGLDK-AMAGELLEFTDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G EI  G  V   GR  ++       GRVI++LG+PIDG   +   D  
Sbjct: 69  EDNVGAVLMGEGLEIQEGSAVTATGRIAQVPVGEAMLGRVIDSLGRPIDGKGDIQASDTR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
           + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++  +
Sbjct: 129 L-LESPAPGIIERRSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            +     +   +G++   V + +           ++VV A + +   L+ +AP T   +A
Sbjct: 188 KEEDVICVYVAIGQKASTVAQVVSTLEEKGALPYTIVVAANASDPATLQYLAPYTGAAMA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G   L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLND 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V+   SVSR+
Sbjct: 308 ELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAVNAGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+   +   + +F E   +     +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQTKAMKKVAGKVKLELAQFAE---LAAFSQFASDLDQATRNQLERGKRLQELLKQP 424

Query: 421 PSDLSSEDVFQEIT 434
            +  S   +F+++ 
Sbjct: 425 QN--SPLQLFEQVA 436


>gi|254779685|ref|YP_003057791.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori B38]
 gi|254001597|emb|CAX29668.1| ATP synthase F1, subunit alpha [Helicobacter pylori B38]
          Length = 503

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|55977763|sp|P00823|ATPA_TOBAC RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
          Length = 507

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    Y   VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYLGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|86154032|ref|ZP_01072233.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121612946|ref|YP_999829.1| F0F1 ATP synthase subunit alpha [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004800|ref|ZP_02270558.1| F0F1 ATP synthase subunit alpha [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|158513873|sp|A1VXI8|ATPA_CAMJJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|85842446|gb|EAQ59660.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87248980|gb|EAQ71942.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 501

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +  +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVINANEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|167535694|ref|XP_001749520.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771912|gb|EDQ85571.1| predicted protein [Monosiga brevicollis MX1]
          Length = 601

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+      V  L+  V   + V     +S   G  + +  D V +   G  + I
Sbjct: 118 ETGRVLSVGDGIARVHGLN-NVQAEEMVEF---SSGLQGMALNLESDNVGVVVFGNDKLI 173

Query: 82  SLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G     P      GRV++ALG PIDG  +      S  +  K P  + R+ 
Sbjct: 174 KEGDVVKRTGAIVDVPIGDELLGRVVDALGNPIDGKGAFKNAPRSR-VGIKAPGIIPRKS 232

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK       +++    +D  D       
Sbjct: 233 VCEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAVAIDAIINQKRFNDGTDESKKLYC 292

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + ++     D +K S+V+ AT+ ++  L+ +AP T   + EYF   G
Sbjct: 293 IYVAVGQKRSTVAQLVKRLTDADAMKYSIVISATASDAAPLQYLAPYTGAAMGEYFRDNG 352

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + LLI D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 353 KHSLLIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSLGGGSM 412

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 413 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 472

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             +++   +   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 473 AMRQVAGKMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGARLTELLKQGQ 523


>gi|11467148|ref|NP_054447.1| ATP synthase F1 subunit alpha [Marchantia polymorpha]
 gi|416672|sp|P26854|ATPAM_MARPO RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|786232|gb|AAC09446.1| atpA [Marchantia polymorpha]
          Length = 513

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 100/430 (23%), Positives = 182/430 (42%), Gaps = 24/430 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V  L++ +  G+ V      S   G  + + 
Sbjct: 13  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNK-IQAGEMVEFA---SGVKGMALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +L   +  
Sbjct: 69  NENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKGMLGRVVDALGVPIDGKGALSAVE-R 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSM 180
             +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK      T+L+ 
Sbjct: 128 RRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQ 187

Query: 181 FARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
              +            +   +G++   V + ++        + S++V AT+ +   L+ +
Sbjct: 188 KQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASDPAPLQFL 247

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF   G + L+I D +++ + + R+++      P    +P  VF    RL
Sbjct: 248 APYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRL 307

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 308 LERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGSRPAI 367

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  SL   + ++ E   +     +   +D      +++  
Sbjct: 368 NVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQYLLNRGA 424

Query: 412 IIYDFLKQSP 421
            + + LKQ+ 
Sbjct: 425 RLTEILKQAQ 434


>gi|139389786|ref|YP_001123447.1| ATP synthase CF1 alpha subunit [Crucihimalaya wallichii]
 gi|190358165|sp|A4QKR6|ATPA_CRUWA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286648|dbj|BAF50271.1| ATPase alpha subunit [Crucihimalaya wallichii]
          Length = 507

 Score =  318 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V         +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFAEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|303325903|ref|ZP_07356346.1| ATP synthase F1, alpha subunit [Desulfovibrio sp. 3_1_syn3]
 gi|302863819|gb|EFL86750.1| ATP synthase F1, alpha subunit [Desulfovibrio sp. 3_1_syn3]
          Length = 502

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 97/448 (21%), Positives = 188/448 (41%), Gaps = 20/448 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ ED  +N        + G +  +      V  + Q     + +   G  
Sbjct: 1   MQIKAEEISKIIEDQIQNYEQRVEMSETGTVLYVGDGIARVHGV-QNAMSMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --VMGMVLNLEEDNVGVALLGSDVGIKEGDPVKRTGKIFSVPVGDKVMGRVLNPLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++   +  K P  + R+ V +   TG++ ID  TP+  GQR  +      GK
Sbjct: 117 GLGPIEATEVR-PVEIKAPGIIARKSVHEPMPTGLKAIDAMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++ A+ +         +G++   V    +        + + ++ AT+ +   L+
Sbjct: 176 TAVCLDAILAQKETDIHCFYVAIGQKKASVALVADTLRKYGALEYTTIISATASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A  T  T+AEY+   G + L+I D +++ A + R+++      P    +P  VF    
Sbjct: 236 YIAAYTGCTMAEYYRDGGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKVNDSLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  ++   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRE---LAAFAQFGSDLDKGTKAKLDR 412

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITKK 436
              + + LKQ     + +++    I   
Sbjct: 413 GARLVELLKQPQYQPMPAQEQVASIWAA 440


>gi|298491952|ref|YP_003722129.1| ATP synthase F1 subunit alpha ['Nostoc azollae' 0708]
 gi|298233870|gb|ADI65006.1| ATP synthase F1, alpha subunit ['Nostoc azollae' 0708]
          Length = 506

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 181/426 (42%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y++ + V   G +  +      +  L +    G+ +  +      +G    + 
Sbjct: 14  IQQQIEQYNQEVKVANVGTVLQVGDGIARIYGLEK-AMAGELLEFEDG---TIGIAQNLE 69

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G  I  G  V   GR  ++       GRV++ALG+ IDG       +  
Sbjct: 70  EDNVGAVLMGEGRNIQEGSSVTATGRIAQVGVGEVLIGRVLDALGRAIDGKGDPKTTETR 129

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      + 
Sbjct: 130 L-IESPAPGIIARRSVHEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 188

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V   ++          +VVV A + +   L+ +AP T  TIA
Sbjct: 189 KGEDVVCVYVAIGQKASTVANVVQTLQEKGAMDYTVVVAANASDPATLQFLAPYTGATIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 249 EYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKLSD 308

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  KG++TA+  +     + +  I  +V SI DG I L+  L   G  P V+P  SVSR+
Sbjct: 309 ELGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGIRPAVNPGISVSRV 368

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+   +   + +F++ +       +   +D      + +   + + LKQ 
Sbjct: 369 GSAAQTKAMKKVAGKIKLELAQFDDLQ---AFAQFASDLDKATQDQLARGVRLRELLKQP 425

Query: 421 PSDLSS 426
            +D  S
Sbjct: 426 QNDPLS 431


>gi|167623382|ref|YP_001673676.1| flagellum-specific ATP synthase [Shewanella halifaxensis HAW-EB4]
 gi|167353404|gb|ABZ76017.1| flagellar protein export ATPase FliI [Shewanella halifaxensis
           HAW-EB4]
          Length = 446

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 156/433 (36%), Positives = 240/433 (55%), Gaps = 5/433 (1%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            LAQ  +     +V   G +  +  +    T       +G     +      + +VI  +
Sbjct: 11  KLAQYQQKIHPFVVEASGQLVRVVGLTLEATG--CRASVGSLCAIETMAGSLIAEVIGFD 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
             ++Y+ P+     +  G  V   G    ++      GRV++  G+PIDG  +L + D  
Sbjct: 69  DQLLYLMPIEELRGVLPGAKVTPLGEQSGLNVGLSLLGRVLDGSGQPIDGLGNL-RTDQK 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
                     + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R  
Sbjct: 128 ASRHVAAINPLARRAISEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGT 187

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  T+  IAEY
Sbjct: 188 TADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIAEY 247

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    ++
Sbjct: 248 FRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGGQQ 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A   
Sbjct: 308 GSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMV 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S +  + +  +  +   +++ +D+  IG Y  G D  +D A+   P +  FL+Q+  D 
Sbjct: 368 ISPEHLEAMRKVKQVYSLYQQNKDLISIGAYSQGSDPRIDNAIRLQPAMNAFLRQTMKDS 427

Query: 425 SSEDVFQEITKKL 437
            + D    +  +L
Sbjct: 428 VTFDSSTLMLSQL 440


>gi|293399935|ref|ZP_06644081.1| ATP synthase F1, alpha subunit [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306335|gb|EFE47578.1| ATP synthase F1, alpha subunit [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 506

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 105/435 (24%), Positives = 181/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +++L ++  +       V + G + +I      V  L+  +  G+ ++     
Sbjct: 1   MSLKPEEISKLIKEQIRRYDDELEVGETGTVITIGDGISLVHGLNNAMS-GELLLFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  + V    +G  E I  GD V   G+   +       GRV+NALG+ ID
Sbjct: 57  HDVYGMVLNLEEEHVGAVLLGDDEGIKEGDEVKRTGKIVEVPVGDMMLGRVVNALGQAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +    P  M R+ V +  +TG+++ID   P+  GQR  +      GK
Sbjct: 117 GGAPIV-SEKYRPVERVAPGVMTRKSVHQPIQTGLKIIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V + +E          + +V +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGKNVKCIYVAIGQKASTVAQIVEKLRKHGAMEYTTIVSSTASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +   GD+VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMENGDDVLIIYDDLSKHAVAYRTMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDELGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTELFNSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K++  SL   + +F E +       +   +D    + +  
Sbjct: 356 AVDSGLSVSRVGSAAQIKAMKQVSGSLKLELAQFREMQ---AFAKFGSDLDAATTETLAH 412

Query: 410 VPIIYDFLKQSPSDL 424
              +   L Q+  + 
Sbjct: 413 GERLTQLLIQNQYEP 427


>gi|284928721|ref|YP_003421243.1| ATP synthase F1 subcomplex subunit alpha [cyanobacterium UCYN-A]
 gi|284809180|gb|ADB94885.1| ATP synthase F1 subcomplex alpha subunit [cyanobacterium UCYN-A]
          Length = 503

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      +  L Q    G+ +  +      +G  + 
Sbjct: 11  SIIRQQIESYDQSVQVSNVGTVLQVGDGTVRIHGLEQ-AMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  G  V   G+  ++       GRV+++LG+PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGTGLDIQEGSTVKATGKIAQVPVGEAMVGRVVDSLGRPIDGKGDIKASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 YRL-IESTAPGIIARKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + I           ++VV A +++   L+ +AP T  +
Sbjct: 186 NQKSEDVICVYVAIGQKASTVAQVIGVLEEKGAMDYTIVVAANANDPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  KG + L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEFFMYKGKHTLVIYDDLTKQAQAYRQLSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  +G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SPELGEGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   +   LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQSQLARGQRLRQILK 422

Query: 419 QSPS 422
           QS +
Sbjct: 423 QSEN 426


>gi|633585|emb|CAA87749.1| ATPase alpha subunit [Platymonas subcordiformis]
          Length = 469

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/434 (22%), Positives = 178/434 (41%), Gaps = 23/434 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   +   N   +  G + SI      V  L++ +  G+ V  Q   S   G  + 
Sbjct: 12  SLLEQKMTEKQFNFSYEEVGKVLSIGDGIARVYGLNK-IQAGEMVEFQ---SGIKGMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G    I+ GD+V        +       GRV++ALG PIDG   L    
Sbjct: 68  LENDNVGVVVFGSDTSINEGDIVKRTNTIVDVPVGKGTLGRVMDALGNPIDGKGPLTNV- 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  ++R+ V +  +TGI+ +D   P+  GQR  +      GK+ +      
Sbjct: 127 TRQRVEVKAPGIISRKSVHEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTRIAIDTII 186

Query: 184 SDCFD----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +                +   VG++   V + ++        K S++V AT+ +   L+ 
Sbjct: 187 NQQGVNEGTDESKKLYCVYVAVGQKRSTVAQLVKILEERGALKYSIIVAATASDPAPLQF 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +   + EYF   G + L+I D +++ + + R+++      P    +P  VF    R
Sbjct: 247 LAPYSGCAMGEYFRDNGMHALIIYDDVSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSR 306

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +G  P 
Sbjct: 307 LLERAAKMSDDTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 366

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  ++   + ++ E   +     +   +D      +++ 
Sbjct: 367 INVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDASTQYLLNRG 423

Query: 411 PIIYDFLKQSPSDL 424
             + + LKQ     
Sbjct: 424 ARLTEVLKQGLFQP 437


>gi|332146790|dbj|BAK19946.1| ApH+ATPase alpha subunit [Aphanothece halophytica]
          Length = 505

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/428 (23%), Positives = 178/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      +  L + V  G+ V     +   +G  + 
Sbjct: 11  SIIRQQIESYDQSVQVSNVGTVLQVGDGIARIYGLDK-VMAGELVEF---DDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   I       GR++++L +PIDG   + + D
Sbjct: 67  LEEDNVGAVLMGSGRGIQEGSSVKATGKIASIPVGEALKGRIVDSLARPIDGKGEI-QTD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 126 STRLLEAGAPGIIERKSVYEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAVAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V +             +V+V A + +   L+ +AP     
Sbjct: 186 NQKSEDVVCVYVAIGQKASTVAQVAGTLEERGALDYTVIVAANASDPATLQYLAPYAGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E  +G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NEELGEGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGFRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSSAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDQATQKQLARGQRLREMLK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|193666827|ref|XP_001943349.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 551

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNVQAEEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   L    L   +  K P  + R  
Sbjct: 124 KEGDVVKRTGAIVDVPVGEDLLGRVVDALGNTIDGKGPL-TSKLRYRVGIKAPGIIPRVS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAQDEKKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +K +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLTDTGAIKYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSETLGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|85713716|ref|ZP_01044706.1| ATP synthase subunit A [Nitrobacter sp. Nb-311A]
 gi|85699620|gb|EAQ37487.1| ATP synthase subunit A [Nitrobacter sp. Nb-311A]
          Length = 510

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 105/442 (23%), Positives = 181/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   +  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNIQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGIVIFGADREIKEGQTVKRTRAIVDTPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +G     +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QGAERKRVDVKAPGIIPRKSVHEPMATGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                 T+L+    +            +   VG++   V +F++        + S+VV A
Sbjct: 176 TAIALDTILNQKPLNAAGAPESQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF     + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYLAPFTGCTMGEYFRDNAMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER       +GN   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDSQGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGSRLTELLKQPQF 434


>gi|116750010|ref|YP_846697.1| F0F1 ATP synthase subunit alpha [Syntrophobacter fumaroxidans MPOB]
 gi|158512352|sp|A0LLG0|ATPA_SYNFM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116699074|gb|ABK18262.1| ATP synthase F1, alpha subunit [Syntrophobacter fumaroxidans MPOB]
          Length = 505

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 182/435 (41%), Gaps = 16/435 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++Q+  +  K+   Q      G + S+      V  + + + + + +    ++
Sbjct: 1   MEIRAEEISQIIREQIKDYEKQVELSETGRVLSVGDGIARVYGVEKCMSM-ELLEFPTEH 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V +  +G    I  G  V   GR   +       GR+I+++G P+D
Sbjct: 60  GVVYGLALNLEEDNVGVAIMGEDIHIKEGSEVKRTGRIASVPVGDAVLGRIIDSVGNPVD 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  +    P  + RQ V +   TG++ ID  TP+  GQR  +     IGK
Sbjct: 120 GKGPIEAKEFSR-VEVIAPGVIARQSVNEPMYTGLKAIDAMTPVGRGQRELIIGDRQIGK 178

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +  D     I   VG++   V + +E          ++VV A + +   L+
Sbjct: 179 TAIAVDTIINQKDSGIICIYVAVGQKKSTVAQVVETLRKHGAMDYTIVVAANASDPAALQ 238

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EY+  KG + L+I D +++ A + R+++      P    YP  +F    
Sbjct: 239 YIAPYAGCAMGEYYRDKGRHALIIYDDLSKQAAAYRQVSLLLRRPPAREAYPGDIFYNHS 298

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L  +L   G  P
Sbjct: 299 RLLERAAKLNAELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEPNLFFAGVRP 358

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A +   K++   L   + ++ E         +   +D      +++
Sbjct: 359 AINVGLSVSRVGGAAQTKAMKQVAGRLRLDLAQYRELE---AFAKFGSDLDKATQAQLNR 415

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 416 GMRMTELLKQPQYQP 430


>gi|52630965|gb|AAU84946.1| putative mitochondrial ATP synthase alpha subunit precursor
           [Toxoptera citricida]
          Length = 551

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNVQAEEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   L    L   +  K P  + R  
Sbjct: 124 KEGDVVKRTGAIVDVPVGEDLLGRVVDALGNTIDGKGPL-TSKLRYRVGIKAPGIIPRVS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAQDEKKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +K +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLTDTGAIKYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSETLGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|262186747|ref|YP_003276006.1| ATP synthase F1 subunit alpha [Pleurozia purpurea]
 gi|237780744|gb|ACR19390.1| ATP synthase F1 subunit alpha [Pleurozia purpurea]
          Length = 513

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/430 (22%), Positives = 179/430 (41%), Gaps = 24/430 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V  L++ +  G+ V      S   G  + + 
Sbjct: 13  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNK-IQAGEMVEFA---SGVKGMALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +L   +  
Sbjct: 69  NENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALSAVE-R 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 128 RRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIPNQ 187

Query: 186 CFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
                           +   +G++   V + ++        + S++V AT+ +   L+ +
Sbjct: 188 KQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASDPAPLQFL 247

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF   G + L+I D +++ + + R+++      P    +P  VF    RL
Sbjct: 248 APYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRL 307

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 308 LERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGSRPAI 367

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  SL   + ++ E   +     +   +D      +++  
Sbjct: 368 NVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQYLLNRGA 424

Query: 412 IIYDFLKQSP 421
            + + LKQ  
Sbjct: 425 RLTEILKQPQ 434


>gi|217032679|ref|ZP_03438165.1| hypothetical protein HPB128_202g13 [Helicobacter pylori B128]
 gi|298735863|ref|YP_003728388.1| F-type H+-transporting ATPase alpha chain [Helicobacter pylori B8]
 gi|216945609|gb|EEC24260.1| hypothetical protein HPB128_202g13 [Helicobacter pylori B128]
 gi|298355052|emb|CBI65924.1| F-type H+-transporting ATPase alpha chain [Helicobacter pylori B8]
          Length = 503

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|86160765|ref|YP_467550.1| F0F1 ATP synthase subunit alpha [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|115312234|sp|Q2IHQ9|ATPA_ANADE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|85777276|gb|ABC84113.1| ATP synthase F1 subcomplex alpha subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 510

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  +DY K + V + G I S       +  L+     G+ +   G      G V+ + 
Sbjct: 12  IREQIKDYGKKVEVAETGSILSQADGVARIYGLAGAAA-GELLEFPGG---IRGLVLNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G  E I  GD V   G    +       GRV++ LG PIDG   L      
Sbjct: 68  EDNVGAAIMGPYEHIREGDPVKRTGLIAEVPVGEELLGRVVDGLGNPIDGRGPLN-AKHQ 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
            +I  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +      ++
Sbjct: 127 RKIEIKAPGIVKRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAIDTILNN 186

Query: 186 CFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             +        +G++   V   ++          + V+ A++ +   ++ +AP T VT+A
Sbjct: 187 KGNNLYCFYVAIGQKQSTVARVVDTLKKHGAMEYTTVISASASDPAPMQYLAPYTGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 247 EYFRDSGRHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           ++G  ++TA+  +     + +  I  +V SI DG I L  +L  +G  P ++   SVSR+
Sbjct: 307 KEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESNLFFQGVRPAINVGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  SL   + ++ E   +     +   +D    + + +   + + LKQ 
Sbjct: 367 GGSAQIKAMKQVAGSLKLDLAQYRE---LAAFAQFGSDLDKATQETLARGERLVELLKQG 423

Query: 421 PSDLSSED 428
                S +
Sbjct: 424 QYAPLSVE 431


>gi|289209748|ref|YP_003461814.1| ATP synthase F1 subunit alpha [Thioalkalivibrio sp. K90mix]
 gi|288945379|gb|ADC73078.1| ATP synthase F1, alpha subunit [Thioalkalivibrio sp. K90mix]
          Length = 513

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 191/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G + S+T     V  L   V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKQRIEKFDASSEASTEGTVVSLTDGIARVHGLGD-VMQGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +  D V +  +G  + I  GD     GR   +       GRV+++LG+PID
Sbjct: 58  -DTFGMALNLERDSVGVVILGDYKHIKEGDTAKCTGRILEVPVGEGLLGRVVDSLGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +  G ++  I    P  ++RQ V++  ++GI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVDTG-VTSPIEKIAPGVIDRQSVDQPLQSGIKAIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + D   K I   VG++   V   +         + +++V A + ES  ++
Sbjct: 176 TAVAIDAIINQKDSGVKCIYVAVGQKASSVASVVAKLEEAGAMENTIIVAANASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYAGCAMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVEQLTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGLSVSRVGGAAQTKIIKKLGGGVRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D +  K + +   + + +KQ      S
Sbjct: 413 LDELTRKQLDRGKRVTELMKQGQYQPMS 440


>gi|260494333|ref|ZP_05814464.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_33]
 gi|260198479|gb|EEW95995.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_33]
          Length = 500

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K+L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKSLEIKTSGTVLEVGDGIARIYGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRVINALG PIDG   +   D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPTGDELLGRVINALGDPIDGKGEI-HAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          +++V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLGCMDYTIIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 422 QPQYHPFSVE 431


>gi|254473365|ref|ZP_05086762.1| flagellum-specific ATP synthase protein [Pseudovibrio sp. JE062]
 gi|211957481|gb|EEA92684.1| flagellum-specific ATP synthase protein [Pseudovibrio sp. JE062]
          Length = 386

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 204/385 (52%), Positives = 278/385 (72%)

Query: 53  GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKP 112
             N +  G+VIRI  D V + P     ++ LG  V   G     P   W GR+INA G P
Sbjct: 2   SNNGEEFGEVIRIEPDSVLVKPYASRSDLGLGIKVKRCGELSFYPDNSWRGRIINAFGHP 61

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG  S+ +G       +  PP ++R RV+    TG+RV+D+FTP+CHGQR+G+FAGSG+
Sbjct: 62  IDGLGSMAEGPTLASFNNLPPPPVHRARVKDAALTGVRVLDLFTPICHGQRLGIFAGSGV 121

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRK 232
           GKSTLLSM ARS+ FD V+I L+GERGREVREF+E+ LGD L KSVVVVAT DESP++R+
Sbjct: 122 GKSTLLSMIARSNSFDTVVIGLIGERGREVREFVEETLGDQLSKSVVVVATGDESPMMRR 181

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP TA+T+AE+F  +G +VLLI+DS+TR+AH++R++A  +GE  ++RGYP SVFSELP 
Sbjct: 182 LAPKTAMTVAEHFRDQGQSVLLIVDSVTRYAHALRDVALAAGEPALSRGYPPSVFSELPL 241

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER GP  +  G +TA+ SVLVDGD+HNDP+AD++R +LDGH+VL+R +AEEGRYP V+
Sbjct: 242 LLERAGPGIEGSGMMTAIFSVLVDGDDHNDPVADNIRGLLDGHVVLDRHIAEEGRYPAVN 301

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            L S+SRLA   WS  E++L++ L  +I +FE+T+D+R++GGY+ GVD +LD+A+   P 
Sbjct: 302 VLGSISRLAQSCWSPQERELITKLKAMIAKFEDTKDLRMMGGYKEGVDPLLDQAIEIAPK 361

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           IY  L Q     SS+D F E+ + L
Sbjct: 362 IYSALVQGLDAPSSQDAFNELAQLL 386


>gi|257042520|gb|ACV32794.1| ATP synthase CF1 alpha subunit [Pinus monticola]
 gi|257042607|gb|ACV32878.1| ATP synthase CF1 alpha subunit [Pinus monticola]
 gi|257042635|gb|ACV32905.1| ATP synthase CF1 alpha subunit [Pinus monticola]
 gi|257042692|gb|ACV32960.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|170744670|ref|YP_001773325.1| F0F1 ATP synthase subunit alpha [Methylobacterium sp. 4-46]
 gi|226739911|sp|B0UE41|ATPA_METS4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|168198944|gb|ACA20891.1| ATP synthase F1, alpha subunit [Methylobacterium sp. 4-46]
          Length = 509

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/436 (22%), Positives = 185/436 (42%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      V  L   V  G+ V  +   S   G
Sbjct: 12  LKEQIKNFGQEAE------VTEVGQVLSVGDGIARVYGL-DNVQAGEMVEFE---SGVRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G+  +I  G  V   G    +       GRV++ALG PIDG   +
Sbjct: 62  MALNLEQDNVGVVIFGVDRDIKEGQTVKRTGAIVDVPVGKGLLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK     
Sbjct: 122 VSTE-RRRVDVKAPGIIPRKSVHEPMATGLKSVDALIPIGRGQRELIIGDRQTGKTAIAL 180

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+     +  D       +   VG++   V +F++    +     S+V+ AT+ +  
Sbjct: 181 DTILNQKPAHEGTDEKAKLYCVYVAVGQKRSTVAQFVKVLEDNGALDYSIVIAATASDPA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP +   + E+F   G + ++I D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQFLAPFSGCAMGEFFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER        G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D    + 
Sbjct: 361 VRPAVNVGLSVSRVGSAAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLDAATQRL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQ   
Sbjct: 418 LNRGSRLTELLKQPQF 433


>gi|309322330|ref|YP_003934181.1| ATP synthase CF1 alpha chain [Cedrus deodara]
 gi|307683256|dbj|BAJ19564.1| ATP synthase CF1 alpha chain [Cedrus deodara]
          Length = 507

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +  +        ++VV  T+D S  L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSSATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|16127679|ref|NP_422243.1| F0F1 ATP synthase subunit alpha [Caulobacter crescentus CB15]
 gi|221236498|ref|YP_002518935.1| F0F1 ATP synthase subunit alpha [Caulobacter crescentus NA1000]
 gi|81620921|sp|Q9A2V7|ATPA_CAUCR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807686|sp|B8H5I2|ATPA_CAUCN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|13425167|gb|AAK25411.1| ATP synthase F1, alpha subunit [Caulobacter crescentus CB15]
 gi|220965671|gb|ACL97027.1| ATP synthase alpha chain [Caulobacter crescentus NA1000]
          Length = 510

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 102/434 (23%), Positives = 180/434 (41%), Gaps = 21/434 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+A    +  V   G + S+      +  L   V  G+ +          G  + +  D
Sbjct: 14  SQIANFGEEAAVSDVGQVLSVGDGIARIYGL-DNVQAGEMLEFPKAG--VKGMALNLERD 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V     G  +EI  GD V   G    +       GRV+N LG+PIDG   +   +    
Sbjct: 71  NVGAVIFGQDQEIKEGDEVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKGPIQYTE-RRR 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK      T+L+  A
Sbjct: 130 VDVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVAIDTILNQKA 189

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            +   D       +   +G++   V + ++        + + VVVA++ E   L+ +AP 
Sbjct: 190 VNAGKDESAKLYCVYVAIGQKRSTVAQIVKTLEEHGALEYTTVVVASASEPAPLQYLAPF 249

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 250 AGCAMGEWFRDNGLHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 309

Query: 297 IGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++ G+   TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+  
Sbjct: 310 AAKLNEDNGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFYQGIRPAVNVG 369

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   +   + ++ E   +     +   +D    K + +   + 
Sbjct: 370 ISVSRVGSSAQIKAMKQVAGPIKGELAQYRE---MAAFAKFGSDLDASTQKMLARGERLT 426

Query: 415 DFLKQSPSDLSSED 428
           + LKQ      S +
Sbjct: 427 ELLKQPQYAPLSVE 440


>gi|148223147|ref|NP_001081246.1| ATP synthase subunit alpha, mitochondrial [Xenopus laevis]
 gi|51258410|gb|AAH80064.1| LOC397732 protein [Xenopus laevis]
          Length = 553

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNTIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|222823234|ref|YP_002574807.1| ATP synthase F1 sector, alpha subunit [Campylobacter lari RM2100]
 gi|254807685|sp|B9KES1|ATPA_CAMLR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|222538455|gb|ACM63556.1| ATP synthase F1 sector, alpha subunit [Campylobacter lari RM2100]
          Length = 501

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 101/439 (23%), Positives = 184/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +       + + G I S+      V  L +    G+ V  +   
Sbjct: 1   MKFKADEISSIIKERIEKFDFNLEIEETGKIISVADGVAKVYGL-KNAMAGEMVEFENGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G V+ +    V I  +G G  +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMVLNLEESSVGIVILGKGLGLKEGSSVKRLKKLLKVPVGDALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVIEASEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAIDTIISQKGKDVICIYVAIGQKQSTVAQVVKKLEEYGAMDYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGVTMGEYFRDNSRHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLSDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVEVLKQPPYSPLSPE 431


>gi|242280914|ref|YP_002993043.1| F0F1 ATP synthase subunit alpha [Desulfovibrio salexigens DSM 2638]
 gi|242123808|gb|ACS81504.1| ATP synthase F1, alpha subunit [Desulfovibrio salexigens DSM 2638]
          Length = 502

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 184/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ ED  +N        + G +  +      V  + +     + +   G  
Sbjct: 1   MQIKAEEISKIIEDQIQNYESKVEMSETGTVLYVGDGIARVHGV-ENAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    I  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --LMGMVLNLEEDNVGVALLGDDTGIKEGDPVKRTGKLFSVPVGDAVMGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID  TP+  GQR  V     +GK
Sbjct: 117 GLGPIEAKE-ERPVELKAPGIIARKSVHEPMYTGLKSIDAMTPIGRGQRELVIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ D         +G++   V    +          + ++ AT+ E   L+
Sbjct: 176 TAICVDAILAQKDSGIHCFYVAIGQKKAAVALVADILRKHGAMEYTTIISATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  T  T+AEY+   G + L+  D +++ A + R+++      P    YP  VF    
Sbjct: 236 FISAYTGATMAEYYRDGGKHALIAYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERSCKVNDDLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++  +L   + ++ E   +     +   +D    + +++
Sbjct: 356 AVNVGLSVSRVGGAAQIKAMKQVAGTLRLDLAQYRE---LAAFAAFGSDLDKATQQKLNR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GARMVELLKQPQ 424


>gi|213512628|ref|NP_001133132.1| ATP synthase subunit alpha, mitochondrial [Salmo salar]
 gi|197632057|gb|ACH70752.1| ATP synthase H+ transporting mitochondrial F1 complex alpha subunit
           1 [Salmo salar]
          Length = 528

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 182/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   LG   +   +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPLGSS-IRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 185 VKEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNEGKDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ E+F   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEFFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMHDNFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|294678492|ref|YP_003579107.1| ATP synthase F1 subunit alpha [Rhodobacter capsulatus SB 1003]
 gi|2493020|sp|P72245|ATPA_RHOCA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|1524322|emb|CAA67908.1| FoF1 ATP synthase [Rhodobacter capsulatus]
 gi|294477312|gb|ADE86700.1| ATP synthase F1, alpha subunit [Rhodobacter capsulatus SB 1003]
          Length = 509

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 179/435 (41%), Gaps = 22/435 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  +++ ++  V + G + S+      V  L   V  G+ V   G      G  + 
Sbjct: 10  AILKEQIKNFGQDAQVAEVGRVLSVGDGIARVHGL-DNVQAGEMVEFPGG---IRGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           + +D V I   G   +I  GD V         P      GRV++ LG PIDG   +   +
Sbjct: 66  LEVDNVGIVIFGSDRDIKEGDTVKRTNAIVDVPAGEGLLGRVVDGLGNPIDGKGPIVAKE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 126 RRIA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAIALDTIL 184

Query: 184 SDCFD---------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
           +                   +G++   V + ++          + VV AT+ +   ++ +
Sbjct: 185 NQKSYNDANPGNKLHCFYVAIGQKRSTVAQLVKKLEEAGAMEYTTVVAATASDPAPMQFL 244

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +A  +AEYF   G + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 245 APYSATAMAEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRL 304

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     ++   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P V
Sbjct: 305 LERSAKLNEDFGSGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLETELFYQGIRPAV 364

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A +   K +   +   + ++ E   +     +   +D    K +++  
Sbjct: 365 NTGLSVSRVGSSAQTNSMKSVAGPVKLELAQYRE---MAAFAQFGSDLDAATQKLLNRGA 421

Query: 412 IIYDFLKQSPSDLSS 426
            + + +KQ      +
Sbjct: 422 RLTELMKQPQYSPLT 436


>gi|255525817|ref|ZP_05392746.1| ATP synthase F1, alpha subunit [Clostridium carboxidivorans P7]
 gi|255510460|gb|EET86771.1| ATP synthase F1, alpha subunit [Clostridium carboxidivorans P7]
          Length = 504

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 104/431 (24%), Positives = 186/431 (43%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y K +  V  G I  I      V  L+  +  G+ +       D  G  + 
Sbjct: 10  SIIKQEIQKYEKKIETVDSGTIIQIGDGIARVYGLNDCIA-GELLEFPN---DVYGMSLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  GD+V   G+   +       GRV+N+LG+PIDG   +   +
Sbjct: 66  LEQDNVGCVLLGSEKGIKEGDIVKRTGKVVEVPVGDAIVGRVVNSLGQPIDGKGPIKTAE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +  K P  + RQ V++  +TGI+ ID F P+  GQR  +      GK+ + +    
Sbjct: 126 -TRAVEIKAPGVIQRQSVKQPLQTGIKAIDSFIPIGKGQRELIIGDRQTGKTAIATDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   + +         +++V +++ E+  L+ +AP    T
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNNLTEAGAMDYTIIVSSSASETAPLQYIAPYAGCT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  +G +VL+I D +++ A + R ++      P    +P  VF    RLLER    
Sbjct: 245 MGEYFMHQGKDVLIIYDDLSKHAVAYRTMSLLLRRAPGREAFPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SDKLGGGSLTALPIIETQAGDVTAYIPTNVISITDGQIFLESELFNAGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVSGTLKLDLAQYRE---LAAFAQFGSDLDGESKRRLEKGKRLIEILK 421

Query: 419 QSP-SDLSSED 428
           Q     +  ED
Sbjct: 422 QPQYKPVPVED 432


>gi|304320612|ref|YP_003854255.1| ATP synthase subunit A [Parvularcula bermudensis HTCC2503]
 gi|303299514|gb|ADM09113.1| ATP synthase subunit A [Parvularcula bermudensis HTCC2503]
          Length = 510

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 177/439 (40%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  +D+ K+  V + G + S+      V  L   V  G+ V   G      G  + 
Sbjct: 10  SILKQQIKDFGKDAEVSEIGQVLSVGDGIARVFGL-DNVQAGEMVDFDGG---IKGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G    I  GD V        +       GRV++ LG PIDG   +   +
Sbjct: 66  LEADNVGVVIFGDDTGIKEGDTVRRSNAIVDVPVGKGLLGRVVDPLGNPIDGKGPIEATE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + +  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK+ +      
Sbjct: 126 RRV-VDVKAPGILPRKSVHEPVQTGIKAIDAMIPVGRGQRELVIGDRQTGKTAICIDAML 184

Query: 184 SDCFDK-----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +                 I   +G++   V + ++          ++VV AT+ E   L+
Sbjct: 185 NQKQVNDAATDDSDKLFCIYVAIGQKRSTVAQIVKTLEDRGALDYTIVVAATASEPAPLQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF   G + +++ D +++ A + R+++      P    YP  VF    
Sbjct: 245 FLAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 304

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++ G  ++TA+  +    ++ +  I  +V SI DG I L   L  +G  P
Sbjct: 305 RLLERAAKLNEDFGLGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFYQGIRP 364

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++   +   + ++ E   +     +   +D      +++
Sbjct: 365 AVNVGLSVSRVGSAAQIKAMKQVAGKIKGELAQYRE---LAAFAQFGSDLDAATQATLNR 421

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 422 GARLTELLKQPQYSPLQVE 440


>gi|189162256|ref|YP_001936502.1| ATP synthase CF1 alpha subunit [Fagopyrum esculentum subsp.
           ancestrale]
 gi|166065342|gb|ABY79717.1| ATP synthase CF1 alpha subunit [Fagopyrum esculentum subsp.
           ancestrale]
          Length = 504

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 185/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVKFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEILASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPAALQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D +    + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFTELE---AFAQFASDLDKVTQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|257095878|ref|YP_003169519.1| ATP synthase F1 subunit alpha [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048402|gb|ACV37590.1| ATP synthase F1, alpha subunit [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 512

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 115/448 (25%), Positives = 195/448 (43%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL +       G + S+T     V  L+  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSKIENLAISADLRTQGTVVSVTDGICRVYGLTD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + ++ D V    +G  ++IS GD V   GR    P      GRV+N+LG+PID
Sbjct: 58  -NTFGMALNLDRDSVGAVVLGEYDQISEGDTVKTTGRILEVPIGPELLGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L    L+ +I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLN-HKLTDKIEKVAPGVIWRKSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   VG++   V   +     +     ++VV AT+ ES  L+
Sbjct: 176 TAVAVDTIINQKGQNLICIYVAVGQKASTVANVVRKLEENGAMEYTIVVAATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G + L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE-------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEWVEKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +  L   G  P +D   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 DTDLFNAGVRPAIDAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +  ++ + +KQ      S
Sbjct: 413 LDEATRKQLDRGRLVTELMKQPQYSPLS 440


>gi|81299147|ref|YP_399355.1| F0F1 ATP synthase subunit alpha [Synechococcus elongatus PCC 7942]
 gi|124007219|sp|Q31RF1|ATPA_SYNE7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81168028|gb|ABB56368.1| ATP synthase F1, alpha subunit [Synechococcus elongatus PCC 7942]
          Length = 505

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E YS+++ V+  G +  +      +  L Q V  G+ V  +   +   G  + 
Sbjct: 11  SIIRQQIEQYSQDVKVENVGTVLQVGDGIARIYGL-QQVMSGELVEFEDGTT---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I       GRV++ LG P+DG   +   +
Sbjct: 67  LEEDNVGAVLMGEGRNIQEGSTVKATGKIAQIPVGDALVGRVVSPLGAPLDGKGEIAATE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 NRL-IESPAPGIIARRSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   IE          +VVV A + E   L+ +AP     
Sbjct: 186 NQKGEDVICVYVAIGQKASSVANIIEVLRERGALDYTVVVAANASEPATLQYLAPYAGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMCKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAIKKIAGTLKLELAQFDE---LAAFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|110597217|ref|ZP_01385505.1| ATP synthase F1, alpha subunit [Chlorobium ferrooxidans DSM 13031]
 gi|110341053|gb|EAT59521.1| ATP synthase F1, alpha subunit [Chlorobium ferrooxidans DSM 13031]
          Length = 526

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 175/445 (39%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      AE Y        G +  +      V  LS+    G+ +       + +G
Sbjct: 14  LRKQLAGFESEAEVYD------VGTVLQVGDGIARVYGLSKAAA-GELLEFPN---NVMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G    +  GD V        I       GRVIN LG+PIDG  S+
Sbjct: 64  MALNLEEDNVGAVLFGESTLVKEGDTVKRTSILASIPVGEAMLGRVINPLGEPIDGKGSI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            + +L + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 -ETELRLPLERRAPGVIYRKSVHEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAVAI 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G +G  V + +           + V+ AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVFCIYVAIGLKGSTVAQVVNTLEKYGAMEYTTVISATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              T+ E+F   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGATLGEFFRDTGRHALVVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVARKMNDLPDALKPIVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNSGQRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKTTKAQLDRGARLVEILKQGQ 444


>gi|197103701|ref|YP_002129078.1| ATP synthase F1, alpha subunit [Phenylobacterium zucineum HLK1]
 gi|226739922|sp|B4RD45|ATPA_PHEZH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|196477121|gb|ACG76649.1| ATP synthase F1, alpha subunit [Phenylobacterium zucineum HLK1]
          Length = 510

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 101/427 (23%), Positives = 174/427 (40%), Gaps = 20/427 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+A    +  V   G + S+      V  L   V  G+ V          G  + +  D
Sbjct: 14  SQIANFGEEADVSDVGSVLSVGDGIARVYGL-DNVQAGEMVEFPSAG--VKGMALNLERD 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GD V   G    +       GRV+N LG+PIDG   +        
Sbjct: 71  NVGIVIFGEDRAIREGDEVRRLGEIVDVPVGKGLLGRVVNPLGEPIDGKGPIQNVAERRR 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK      T+L+   
Sbjct: 131 VDVKAPGIIPRKSVHEPVQTGLKAIDTLIPVGRGQRELIIGDRQTGKTAVAVDTILNQKQ 190

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            +   D       I   +G++   V + ++          ++VV AT+ E   L+ +AP 
Sbjct: 191 VNAGGDESQKLYCIYVAIGQKRSTVAQIVKTLEERGALDYTIVVSATASEPAPLQFLAPF 250

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + E+F   G + ++I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 251 AGCAMGEWFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 310

Query: 297 IGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++   G++TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+  
Sbjct: 311 AAKLNEDNGLGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFFQGIRPAVNVG 370

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K     +   + ++ E   +     +   +D+   + + +   + 
Sbjct: 371 ISVSRVGSSAQIKAMKTAAGPIKGELAQYRE---MAAFAKFGSDLDVATQRQLARGERLT 427

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 428 ELLKQPQ 434


>gi|291286801|ref|YP_003503617.1| ATP synthase F1, alpha subunit [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883961|gb|ADD67661.1| ATP synthase F1, alpha subunit [Denitrovibrio acetiphilus DSM
           12809]
          Length = 502

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 181/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+  D  KN      + + G I +       V  L +    G+ +   G  
Sbjct: 1   MQIKAEEISQIIRDQIKNFDQKIDMEEVGTILTAGDGIAKVYGL-ENAMAGELLELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G V  +  D V I  +G    I  GD V   G+   +       GRV++ALG+PID
Sbjct: 59  --VHGIVFNLEEDNVGIVIMGEYAHIGEGDTVKRTGKIASVPVGEALIGRVVDALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIETKEFDV-IEKIAPGIVKRKPVHEPVQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   V   ++          +++V A++ +   ++
Sbjct: 176 TAVAIDAIINQKGQNMICVYVAIGQKRSTVARIVDTLEKHGAMEYTIIVSASASDPAPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +APL   T+ EYF  +G + LLI D +++ A + R+++      P    YP  VF    
Sbjct: 236 YIAPLAGTTMGEYFRDRGQHALLIYDDLSKQATAYRQMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER       +G  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDAEGAGSLTALPIIETQASDVSAYIPTNVISITDGQIFLESDLFLSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++  SL   + ++ E   +     +   +D      + +
Sbjct: 356 AVNVGISVSRVGGSAQIKAMKQVAGSLRLNLAQYRE---LAAFSQFGSDLDAATQAQLRR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GAKLVEILKQGQ 424


>gi|282600935|ref|ZP_05980210.2| ATP synthase F1, alpha subunit [Subdoligranulum variabile DSM
           15176]
 gi|282570085|gb|EFB75620.1| ATP synthase F1, alpha subunit [Subdoligranulum variabile DSM
           15176]
          Length = 511

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 112/432 (25%), Positives = 181/432 (41%), Gaps = 19/432 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q   E ++++     K         + G ++ +       + L      G+ V     +S
Sbjct: 7   QLKPEQISRIIRSQIKYYQNAIEQSETGTVTMVGDGIARASGL-DNCMAGELVQF---DS 62

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G    +  + V I  +G    I  GD +   G+   +       GRV+NALG+PIDG
Sbjct: 63  GTYGMAQNLEENSVSIVLLGDDSGIKEGDGIRRTGKVVSVPVGEKMIGRVVNALGQPIDG 122

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D    I S  P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 123 KGPIEAADYRA-IESPAPGIIDRQPVKQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKT 181

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            + +    +        I   +G++   V   +E+   +     + VV AT+ E   L+ 
Sbjct: 182 VIATDTIINQKGKDVLCIYVAIGQKRSTVASLVENLEKNGAMAYTTVVCATASELSPLQY 241

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + EYF  KG +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 242 IAPYAGCAMGEYFMQKGKHVLIIYDDLSKHAVAYRALSLLIRRPPGREAYPGDVFYLHSR 301

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  +     +    I  +V SI DG I L   L   G  P 
Sbjct: 302 LLERAAKLSDEKGGGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETELFHAGIRPA 361

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q 
Sbjct: 362 VNPGISVSRVGGNAQIKAMKKVAGTLKLIYSQYRELQGFAQFG---SDLDADTKARLAQG 418

Query: 411 PIIYDFLKQSPS 422
             I + LKQ  +
Sbjct: 419 ERIVEVLKQDRN 430


>gi|183217735|ref|YP_001837354.1| ATP synthase CF1 alpha subunit [Guizotia abyssinica]
 gi|179366250|gb|ACB86521.1| ATP synthase CF1 alpha subunit [Guizotia abyssinica]
          Length = 508

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  Q      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFQEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEILSSEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|114706757|ref|ZP_01439657.1| flagellum-specific ATP synthase [Fulvimarina pelagi HTCC2506]
 gi|114537705|gb|EAU40829.1| flagellum-specific ATP synthase [Fulvimarina pelagi HTCC2506]
          Length = 446

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 209/438 (47%), Positives = 294/438 (67%), Gaps = 4/438 (0%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M +  + L+ L    S   +   G I  +    + V  LS +V LGD +   G++ D LG
Sbjct: 1   MHQQTDALSTL----SAPRLDISGRIVDVGPQSFRVAGLSPFVRLGDCISCPGEDRDELG 56

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI+ D + + P        +G      G F I+P A W GRV++A  +P D    + 
Sbjct: 57  EVVRIDADSLTVKPYTTRFNRGVGSPAIKVGPFSITPDASWRGRVLDAFCRPQDDKGPVR 116

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +G+    + ++   A+ R R+ +G  TG+ V+DIFTPL  GQRIGVFAGSG+GKSTL+ M
Sbjct: 117 QGEAIRPVDAQPLSALKRARLSEGVPTGVSVVDIFTPLVKGQRIGVFAGSGVGKSTLMGM 176

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            ++S  FD VI++LVGERGREVREF+E+ +   L K V +VAT DESP++R++AP TA  
Sbjct: 177 LSQSKGFDTVIVALVGERGREVREFLEEVMAGQLDKVVTIVATGDESPMMRRLAPRTATA 236

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +GD+VLLI+DS+TR+AH+ R++A ++GE PV+RGYP S+FSELP+LLER G  
Sbjct: 237 VAEHFRDRGDDVLLIVDSVTRYAHAARDVALSAGEPPVSRGYPPSIFSELPQLLERAGTG 296

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G IT + +VLVDGD+HNDPIAD++R  LDGHIVL+R +AE+GR+P VD L S+SRL
Sbjct: 297 IEGSGTITGIYAVLVDGDDHNDPIADAIRGTLDGHIVLDREIAEQGRFPAVDYLKSISRL 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A+KAW   E++LV+ L  +  RFE+TRD+RL+GGY+ G D  LD+AV  VP IYDFL Q 
Sbjct: 357 AEKAWHGSERELVTRLRAMTSRFEDTRDLRLLGGYQRGSDQTLDQAVDLVPHIYDFLTQR 416

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P +   E  F  ++  L+
Sbjct: 417 PGEGWHEKPFDALSAALK 434


>gi|313681885|ref|YP_004059623.1| ATP synthase f1 subcomplex alpha subunit [Sulfuricurvum kujiense
           DSM 16994]
 gi|313154745|gb|ADR33423.1| ATP synthase F1 subcomplex alpha subunit [Sulfuricurvum kujiense
           DSM 16994]
          Length = 505

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 110/423 (26%), Positives = 186/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +   ++  N+ + + G I S       V  L+  V  G+ V  +       G V+ 
Sbjct: 12  SIIKERIGNFELNVDINETGKIISYGDGIAQVYGLN-NVMAGEMVEFEDG---TRGLVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G+E+  G  V   GR  R+       GRV+NALG+PIDG   +   +
Sbjct: 68  LEESSVGVVILGKGKELREGMSVKRLGRLLRVPVGNALLGRVVNALGEPIDGKGPIETTE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   +  K P  M R+ V +   TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 VRF-VEEKAPGIMARKSVHEPMATGIKAIDALVPIGRGQRELIIGDRQTGKTTVALDTII 186

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   VG++   V + I     +     +++V AT+ E+  L+ +AP T VT
Sbjct: 187 NQKGNGVVCIYVAVGQKESTVAQVIRRLEENGAMDYTIIVSATASEAAALQFLAPYTGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF     + L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MGEYFRDNAKHGLIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKL 306

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E G  ++TA+  +     +    I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDEMGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E +       +   +D +  K + +   + + LK
Sbjct: 367 RVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFAQFASDLDEVSRKQLERGQRMVEVLK 423

Query: 419 QSP 421
           Q P
Sbjct: 424 QPP 426


>gi|296040813|gb|ADG85374.1| ATPase subunit 1 [Silene noctiflora]
          Length = 506

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 97/428 (22%), Positives = 178/428 (41%), Gaps = 23/428 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +++++ Y+   V Q G + S+      V  L + +  G+ V      S   G  + +  +
Sbjct: 16  SRISKFYTHFQVDQIGRVISVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENE 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GDLV   G    +       GRV+ ALG PIDG  +L   +    
Sbjct: 72  NVGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKAMLGRVVEALGVPIDGRGALSAHE-RRR 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC- 186
           +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 131 VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKL 190

Query: 187 ----------FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     +    S++V AT+ +   L+ +AP
Sbjct: 191 LNSKASSESETLYCVYVAIGQKRSTVAQLVQILSEAHAMDYSILVAATASDPAPLQFLAP 250

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF     + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 251 YSGCAMGEYFLDNKMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 310

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 311 RAAKRSDQTGAGSLTALPIIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 370

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  SL   + ++ E   +     +   +D      +++   +
Sbjct: 371 GLSVSRVGSAAQLKAMKEVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARL 427

Query: 414 YDFLKQSP 421
            + LKQ  
Sbjct: 428 TEVLKQQQ 435


>gi|108802628|ref|YP_636284.1| ATP synthase CF1 alpha subunit [Eucalyptus globulus subsp.
           globulus]
 gi|309322436|ref|YP_003933949.1| ATP synthase CF1 alpha subunit [Eucalyptus grandis]
 gi|146317662|sp|Q49L13|ATPA_EUCGG RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|60460794|gb|AAX21014.1| ATP synthase CF1 alpha subunit [Eucalyptus globulus subsp.
           globulus]
 gi|308223270|gb|ADO23578.1| ATP synthase CF1 alpha subunit [Eucalyptus grandis]
          Length = 507

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIYASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMFRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|82754614|gb|ABB90028.1| ATP synthase CF1 alpha chain [Solanum tuberosum]
          Length = 507

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I+L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQILLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|261839865|gb|ACX99630.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori 52]
 gi|317012911|gb|ADU83519.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori Lithuania75]
          Length = 503

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|255305275|ref|ZP_05349447.1| flagellum-specific ATP synthase [Clostridium difficile ATCC 43255]
          Length = 439

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 169/441 (38%), Positives = 254/441 (57%), Gaps = 14/441 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           +  + + + +  E+    L +  G +  I  +   V  +  +V  G+  V   + N    
Sbjct: 6   ISIDFDKINKKIENLE--LTISEGRVKKIIGLTVEVEGIKAFV--GELCVIYNQVNKPVN 61

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+      V +  +G    I+ G  V   G    +  S    G+V++ LG PID  D+
Sbjct: 62  CEVVGFKDKEVILMALGELTLIAPGCKVISKGIPLSVMCSDNLLGKVLDGLGNPIDNSDA 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        + ++ P  M R+++    +TG+R ID FT    GQRIG+FAGSG+GKST L
Sbjct: 122 VLGD--RYNLNNEPPDPMKRKKIRNIMETGVRAIDAFTTCGEGQRIGIFAGSGVGKSTTL 179

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREV +FI+ D   + +KKSVVV ATSD++P++R    LT
Sbjct: 180 GMIARNAKADVNVIALIGERGREVLDFIDKDLGEEGMKKSVVVCATSDKAPLVRLKGALT 239

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LP+L+ER 
Sbjct: 240 ATAIAEYFRDQGKKVILMMDSVTRFAMAQREVGIAIGEPPAQKGYTPSVFAILPKLMERT 299

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA  +VLVDGD+ N+PIAD+ R ILDGHIVL+R LA +  YP +D L S+
Sbjct: 300 GTSDK--GSITAFYTVLVDGDDFNEPIADTTRGILDGHIVLSRDLANKNHYPSIDVLNSL 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL ++  S ++ K+ S    ++  + E  D+  IG Y  G +  +D+A++    I +FL
Sbjct: 358 SRLMNEIASKEDIKIASFARDMLAEYREAEDLINIGAYASGTNKKIDEAIYYHEHIINFL 417

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           KQ  ++ SS   F E    L+
Sbjct: 418 KQGINEKSS---FNETISSLR 435


>gi|74181742|dbj|BAE32582.1| unnamed protein product [Mus musculus]
          Length = 509

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 101/439 (23%), Positives = 176/439 (40%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   VG++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRAASESETLYCVYVAVGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + + LKQ  
Sbjct: 417 TQALLNRGARLTEVLKQPQ 435


>gi|308184874|ref|YP_003929007.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori SJM180]
 gi|308060794|gb|ADO02690.1| F0F1 ATP synthase subunit alpha [Helicobacter pylori SJM180]
          Length = 503

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        + G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAEVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L++ D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|85001187|ref|XP_955312.1| ATP synthase alpha chain heart isoform, mitochondrial precursor
           [Theileria annulata strain Ankara]
 gi|65303458|emb|CAI75836.1| ATP synthase alpha chain heart isoform, mitochondrial precursor,
           putative [Theileria annulata]
          Length = 545

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 101/444 (22%), Positives = 190/444 (42%), Gaps = 27/444 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           + +   +++L ++      S+  V   G++ ++      +  L + V  G+ V+    +S
Sbjct: 36  KVSPAEISKLLQNRIAGWDSQKDVRDVGHVINVGDGIARIYGL-KEVKAGELVMF---SS 91

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +  D + +   G    I  GD V    R   +       GRV++ALG+PIDG
Sbjct: 92  GVAGMALNLETDNIGVVVFGDDRSILEGDTVTRTNRILDVPVGPELLGRVVDALGRPIDG 151

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   + S  +    P  ++R+ V +   TG++ +D   P+  GQR  +      GK+
Sbjct: 152 KGDLVTKETSR-VEVPAPGIIDRRSVHEPMTTGMKCVDSLVPIGRGQRELIIGDRQTGKT 210

Query: 176 TLLSMFARSDCFD----------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
            L      +                I   +G++   V   ++     D LK ++VV AT+
Sbjct: 211 ALAVDTILNQRLVNEGLEENKRLYCIYVAIGQKRSTVARILKTLEDNDALKYTIVVAATA 270

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP T  ++ E+F +   + ++I D +++ A + R+++      P    YP 
Sbjct: 271 SDPAPLQFLAPFTGCSMGEWFRNNKKHCVIIYDDLSKQATAYRQMSLLLRRPPGREAYPG 330

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            +F    RLLER       KG+   TA+  +     + +  I  +V SI DG I L   L
Sbjct: 331 DIFYLHSRLLERAAKMSDAKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESEL 390

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A S   K++  ++   + +F E   I+    +   +D  
Sbjct: 391 FYKGIRPAINVGLSVSRVGSAAQSKAMKQVSGTMKLDLAQFRE---IQAFSQFGSDLDAS 447

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS 426
             + + +  ++ + LKQ      S
Sbjct: 448 TQQLLTRGTLLTELLKQKQYAPLS 471


>gi|258406334|ref|YP_003199076.1| F0F1 ATP synthase subunit alpha [Desulfohalobium retbaense DSM
           5692]
 gi|257798561|gb|ACV69498.1| ATP synthase F1, alpha subunit [Desulfohalobium retbaense DSM 5692]
          Length = 504

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 96/432 (22%), Positives = 183/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ +D  +N   +      G +  +      V  + Q     + +   G  
Sbjct: 1   MQIKAEEISKVIQDQIQNYEARMETSETGTVIYVGDGIARVHGV-QNAMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G V+ ++ D V +  +G    I  GD V   G    +       GRVI+ LG+P+D
Sbjct: 59  --VKGMVLNLDEDNVGVALLGEDSHIKEGDEVKRTGEIFSVPVGEAVKGRVISPLGEPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  +  K P  + R+ V +   TG++ ID  TP+  GQR  +     +GK
Sbjct: 117 GLGPIDDTE-SRPVEIKAPGIVQRKSVHEPMYTGLKAIDAMTPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   S+ A+ D         +G++   V    +          + ++ AT+ E+  L+
Sbjct: 176 TAICLDSILAQKDSDVHCFYVAIGQKKSTVALVADALRQHGAMEYTTIISATASEAASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ E++   G + L+  D +++ A + R+++      P    +P  VF    
Sbjct: 236 FIAAYAGCTMGEHYRDNGQHALICYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E+G  ++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKLSDEEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFNAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D    + + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKQVAGTLRLDLAQYRE---LAAFAQFGSDLDKATQQKLER 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GARMVELLKQPQ 424


>gi|218781466|ref|YP_002432784.1| F0F1 ATP synthase subunit alpha [Desulfatibacillum alkenivorans
           AK-01]
 gi|226739869|sp|B8FGT6|ATPA_DESAA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218762850|gb|ACL05316.1| ATP synthase F1, alpha subunit [Desulfatibacillum alkenivorans
           AK-01]
          Length = 505

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 107/432 (24%), Positives = 185/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++Q+ ++  K+      + + G + S+      V  L + + L + V   G  
Sbjct: 1   MEIRAEEISQIIKEQIKDYDKKVDLSETGTVLSVGDGIARVYGLEKAMAL-ELVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              LG V+ +  D V +  +G    I  GD+V   G+  ++       GRV++ +G PID
Sbjct: 59  --ILGLVLNLEEDNVGVAIMGEVTHIKEGDMVKRTGKIAQVPVGEAVLGRVVDGVGSPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   +  M +    P  + R+ V +   TG++ +D  TP+  GQR  +     IGK
Sbjct: 117 GKGPLDATETRM-VEMVAPGVIARKSVHEPCYTGLKAVDAMTPVGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ D     I    G++   V + +           + VV A + +   L+
Sbjct: 176 TAVAVDAILAQKDTDIYCIYVACGQKKSTVAQVVATLEKYGAMEYTTVVSACASDPATLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG + L+I D +++ A + R+I+      P    YP  +F    
Sbjct: 236 YLAPYAGCAMGEYFRDKGQHALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDIFYNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKVSDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEPGLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + +F E       G     +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQEKAMKQVAGTLRMDLAQFRELEAFAAFG---SDLDAATQKQLKR 412

Query: 410 VPIIYDFLKQSP 421
              +   LKQ  
Sbjct: 413 GERLVQILKQPQ 424


>gi|71896075|ref|NP_001025610.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Xenopus (Silurana)
           tropicalis]
 gi|60552664|gb|AAH91067.1| atp5a1 protein [Xenopus (Silurana) tropicalis]
          Length = 553

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   L    +   +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPL-ASKIRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|237744082|ref|ZP_04574563.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. 7_1]
 gi|229431311|gb|EEO41523.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. 7_1]
          Length = 500

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K+L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKSLEIKTSGTVLEVGDGIARIYGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRVINALG PIDG   +   D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPTGDELLGRVINALGDPIDGKGEI-HAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          +++V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLGCMDYTIIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 422 QPQYHPFSVE 431


>gi|117926734|ref|YP_867351.1| ATP synthase F1 subunit alpha [Magnetococcus sp. MC-1]
 gi|158512339|sp|A0LDA2|ATPA_MAGSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|117610490|gb|ABK45945.1| ATP synthase F1 subcomplex alpha subunit [Magnetococcus sp. MC-1]
          Length = 507

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 101/444 (22%), Positives = 179/444 (40%), Gaps = 24/444 (5%)

Query: 1   MQKNLETLA-----QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ ++  ++     Q+AE   +  V + G + ++         L   V  G+ V  +   
Sbjct: 1   MQVSVAEISGILKKQIAEYGKEAEVSEVGEVIAVGDGIARAYGL-DNVMAGEMVEFEDG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V I   G G  I  G  V   GR   +       GRV + LG PID
Sbjct: 59  --TQGMALNLEEDNVGIVIFGEGLAIKEGTTVKRTGRIVDVPVGKGLLGRVTDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               L   +  +    K P  + R+ V +   TGI+ +D   P+  GQR  +      GK
Sbjct: 117 DKGPLETTERRLA-EVKAPGIIPRKSVHEPLHTGIKALDGLVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDE 226
           + +      +       D     I   +G++   V + ++    +     + VV AT+ +
Sbjct: 176 TAVAIDTIINQKRTHETDSPVYCIYVAIGQKRSTVAQVVQTLEENGAMAYTTVVAATASD 235

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ ++  T   + EY+   G + L++ D +++ A + R+++      P    YP  V
Sbjct: 236 PAPMQFLSAYTGCAMGEYYRDNGMHALIVYDDLSKQATAYRQMSLILRRPPGREAYPGDV 295

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 296 FYIHSRLLERAAKMNDEHGGGSLTALPIIETQDGDVSAYIPTNVISITDGQIFLETDLFY 355

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P +    SVSR+   A     K++  +L   + ++ E   +     +   +D    
Sbjct: 356 SGIRPAISVGLSVSRVGGSAQVKATKQVAGTLRLDLAQYRE---MAAFAQFGSDLDATTQ 412

Query: 405 KAVHQVPIIYDFLKQSPSDLSSED 428
           K +H+   + + LKQ+     S +
Sbjct: 413 KLLHRGKRLMELLKQAQYAPLSME 436


>gi|209525757|ref|ZP_03274293.1| ATP synthase F1, alpha subunit [Arthrospira maxima CS-328]
 gi|209493730|gb|EDZ94049.1| ATP synthase F1, alpha subunit [Arthrospira maxima CS-328]
          Length = 505

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 185/434 (42%), Gaps = 17/434 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +    E Y +++ V   G +  +      +  L +    G+ +         +G  + + 
Sbjct: 13  IRDQIEQYGQDVKVSNVGTVLQVGDGIARIYGLDK-AMAGELLEFTDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G EI  G  V   GR  ++       GRVI++LG+PIDG   +   D  
Sbjct: 69  EDNVGAVLMGEGLEIQEGSAVTATGRIAQVPVGEAMLGRVIDSLGRPIDGKGDIQASDTR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
           + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++  +
Sbjct: 129 L-LESPAPGIIERRSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            +     +   +G++   V + +           ++VV A + +   L+ +AP T   +A
Sbjct: 188 KEEDVICVYVAIGQKASTVAQVVSTLEEKGALPYTIVVAANASDPATLQYLAPYTGAAMA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G   L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYQGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLND 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V+   SVSR+
Sbjct: 308 ELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAVNAGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+   +   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQTKAMKKVAGKVKLELAQFAEL---AAFSQFASDLDQATRNQLERGKRLQELLKQP 424

Query: 421 PSDLSSEDVFQEIT 434
            +  S   +F+++ 
Sbjct: 425 QN--SPLQLFEQVA 436


>gi|194132095|gb|ACF33349.1| ATP synthase CF1 alpha subunit [Gonystylus bancanus]
          Length = 506

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 RS 426


>gi|296936656|gb|ADH94328.1| ATP synthase CF1 alpha subunit [Syzygium cumini]
          Length = 507

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 182/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIYASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGENVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMFRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|75674628|ref|YP_317049.1| F0F1 ATP synthase subunit alpha [Nitrobacter winogradskyi Nb-255]
 gi|115312258|sp|Q3SVJ4|ATPA_NITWN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|74419498|gb|ABA03697.1| ATP synthase F1 subcomplex alpha subunit [Nitrobacter winogradskyi
           Nb-255]
          Length = 510

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 179/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   +  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGKEAEVSEVGQVLSVGDGIARVYGL-DNIQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGIVIFGADREIKEGQTVKRTRAIVDAPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +G     +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QGAERKRVDVKAPGIIPRKSVHEPMATGLKAIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   VG++   V +F++        + S+VV A
Sbjct: 176 TAIALDTILNQKPLNVAGAPESQKLYCVYVAVGQKRSTVAQFVKVLEEQGALEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF     + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYLAPFTGCTMGEYFRDNAMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER       +GN   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDSQGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGSRLTELLKQPQF 434


>gi|158520618|ref|YP_001528488.1| F0F1 ATP synthase subunit alpha [Desulfococcus oleovorans Hxd3]
 gi|226739871|sp|A8ZU99|ATPA_DESOH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158509444|gb|ABW66411.1| ATP synthase F1, alpha subunit [Desulfococcus oleovorans Hxd3]
          Length = 505

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 184/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++Q+ ++  +       + + G + S+      V  L + V   + V   G  
Sbjct: 1   MEIRAEEISQIIKEQIRGFDKKVELSETGVVLSVGDGIARVYGLEK-VMTMELVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              LG V+ +  D V +  +G    I  GD+V   GR  ++       GRV++  G PID
Sbjct: 59  --ILGLVLNLEEDNVGVAIMGEDTNIKEGDIVKRTGRIAQVPVGEAVLGRVVDTTGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I    P  + R+ V +   TG++ +D  TP+  GQR  +     IGK
Sbjct: 117 GKGPINASETRR-IEVVAPGVIARKSVHEPCYTGLKAVDAMTPVGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ D     I    G++   V +             + +V A + +   L+
Sbjct: 176 TAVAIDAILAQKDTDVYCIYVACGQKKSSVAQVAAILEKHGAMEYTTIVAACASDPASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF   G + L+I D +++ A + R+++      P    YP  +F    
Sbjct: 236 YLAPYAGCSMGEYFRDNGKHALIIYDDLSKQAAAYRQVSLLLRRPPGREAYPGDIFYNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L  +L   G  P
Sbjct: 296 RLLERAAKLNDELGAGSLTALPIIETQAGDVSAFIPTNVISITDGQIYLEPNLFFAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + +F E       G     +D    + + +
Sbjct: 356 AINVGLSVSRVGGAAQVKAMKQVAGTLRLDMAQFRELEAFAAFG---SDLDAATQRQLTR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 413 GARLVEILKQPQYKPLSME 431


>gi|317046158|ref|YP_004072447.1| ATPase alpha subunit [Corynocarpus laevigata]
 gi|309252875|gb|ADO60295.1| ATPase alpha subunit [Corynocarpus laevigata]
          Length = 507

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRNRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|187778751|ref|ZP_02995224.1| hypothetical protein CLOSPO_02346 [Clostridium sporogenes ATCC
           15579]
 gi|187772376|gb|EDU36178.1| hypothetical protein CLOSPO_02346 [Clostridium sporogenes ATCC
           15579]
          Length = 436

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 172/434 (39%), Positives = 250/434 (57%), Gaps = 14/434 (3%)

Query: 10  QLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRIN 66
           Q  E   K  N     G +  +  +   V  +  +V  G+  +   + +  +  +V+   
Sbjct: 7   QKIEKRIKETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEVVGFK 64

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V + P+G    I+ G  V   G+   +  S    G+V++ LGKP++G++ +     +
Sbjct: 65  EENVILMPLGELIGIAPGCRVIPQGKPLSVICSENILGKVLDGLGKPLEGEELMEGSPYA 124

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           ++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M A+  
Sbjct: 125 LD--SDPPDPMKRRRIKDVIPTGIKAIDGFMTVGEGQRIGIFAGSGVGKSTTLGMIAKYA 182

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  IAEY
Sbjct: 183 EADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATAIAEY 242

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S K  
Sbjct: 243 FRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMSNK-- 300

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL  + 
Sbjct: 301 GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDVLSSVSRLMSEI 360

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ   + 
Sbjct: 361 ALKEHKDAAGMARDLLATYKNSEDLINIGAYAKGSNPKVDMAIHYHEPILSFLKQGIGEQ 420

Query: 425 SSEDVFQEITKKLQ 438
            S   F+E T  LQ
Sbjct: 421 HS---FEESTSILQ 431


>gi|331091997|ref|ZP_08340828.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330402198|gb|EGG81769.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 500

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/435 (23%), Positives = 181/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K       V   G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQIKRYASDLEVSDVGTVIQVADGIARIHGL-ENAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G    I+ GD V   GR   +    C  GRV+NALG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGAVLLGDNRNINEGDTVKTTGRVVEVPVGDCMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +     +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QAKAYRQIERVASGVISRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++ +        + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVKCIYVAIGQKASTVANIVQTFEEYGAMDYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E +  KG++VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEEWMEKGEDVLIVYDDLSKHATAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARLSDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETEMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++P  SVSR+   A     KK+   +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AINPGISVSRVGGSAQIKAMKKIAGPIRIDLAQYRE---LAAFAQFGSELDADTTERLAQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ     
Sbjct: 413 GARIKEMLKQPQYQP 427


>gi|322785985|gb|EFZ12601.1| hypothetical protein SINV_08923 [Solenopsis invicta]
          Length = 544

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 178/414 (42%), Gaps = 26/414 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G    I
Sbjct: 65  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDRHI 120

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   L    L   I +K P  + R  
Sbjct: 121 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPLN-SKLRFRIGTKAPGIIPR-- 177

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
             +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  +       
Sbjct: 178 --EPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDGGEEKKKLYC 235

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +  +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 236 IYVAIGQKRSTVAQIVKRLTDSGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 295

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 296 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNENLGGGSL 355

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 356 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 415

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 416 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 466


>gi|124112037|ref|YP_001019097.1| CF1 alpha subunit of ATP synthase [Chlorokybus atmophyticus]
 gi|190358290|sp|Q19VA5|ATPA_CHLAT RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|124012153|gb|ABD62169.2| CF1 alpha subunit of ATP synthase [Chlorokybus atmophyticus]
          Length = 506

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/430 (23%), Positives = 186/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + VV  G +  +      +  L++ V  G+ +  +      +G  + 
Sbjct: 11  SVIRKQIEQYNQEVKVVNIGTVLQVGDGIARIYGLAK-VMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G G  I  G  V   G+  +I     + GRV+NAL +PIDG   +   +
Sbjct: 67  LESNNVGAVMMGEGLTIQEGSSVKATGKIAQIPVGEAYVGRVVNALARPIDGKGEIPTSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 YRL-LESPAPGIISRRSVYEPLQTGLVAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +           ++VV   ++    L+ +AP T  T
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVNTLEERGAMEYTIVVAENANAPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 STALGEGSMTALPVVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQVKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGRRLRELLK 422

Query: 419 QSPSDLSSED 428
           Q+ +   S +
Sbjct: 423 QAQAAPLSVE 432


>gi|153952146|ref|YP_001397359.1| F0F1 ATP synthase subunit alpha [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166201658|sp|A7H1H9|ATPA_CAMJD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|152939592|gb|ABS44333.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 501

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/439 (23%), Positives = 187/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +  +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVVNANEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|295687680|ref|YP_003591373.1| ATP synthase F1 subunit alpha [Caulobacter segnis ATCC 21756]
 gi|295429583|gb|ADG08755.1| ATP synthase F1, alpha subunit [Caulobacter segnis ATCC 21756]
          Length = 510

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/427 (23%), Positives = 180/427 (42%), Gaps = 21/427 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+A    +  V   G + S+      +  L   V  G+ +          G  + +  D
Sbjct: 14  SQIANFGEEAAVSDVGQVLSVGDGIARIYGL-DNVQAGEMLEFPKAG--VKGMALNLERD 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V     G  +EI  GD V   G    +       GRV+N LG+PIDG   +   +    
Sbjct: 71  NVGAVIFGQDQEIKEGDEVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKGPIQYTE-RRR 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK      T+L+  A
Sbjct: 130 VDVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVAIDTILNQKA 189

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            +   D       +   +G++   V + ++        + ++VVVA++ E   L+ +AP 
Sbjct: 190 VNAGKDESAKLYCVYVAIGQKRSTVAQIVKTLEEHGALEYTIVVVASASEPAPLQYLAPF 249

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +   + E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 250 SGCAMGEWFRDNGLHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 309

Query: 297 IGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++ G+   TA+  +    ++ +  I  +V SI DG I L   L  +G  P V+  
Sbjct: 310 AAKLNEDNGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLETDLFYQGIRPAVNVG 369

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   +   + ++ E   +     +   +D    K + +   + 
Sbjct: 370 ISVSRVGSSAQIKAMKQVAGPIKGELAQYRE---MAAFAKFGSDLDASTQKMLARGERLT 426

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 427 ELLKQPQ 433


>gi|126697822|ref|YP_001086719.1| flagellum-specific ATP synthase [Clostridium difficile 630]
 gi|115249259|emb|CAJ67072.1| ATP synthase subunit beta FliI [Clostridium difficile]
          Length = 439

 Score =  318 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 169/438 (38%), Positives = 253/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQV 62
           + + + +  E+    L +  G +  I  +   V  +  +V  G+  V   + N     +V
Sbjct: 9   DFDKINKKIENLE--LTISEGRVKKIIGLTVEVEGIKAFV--GELCVIYNQVNKPVNCEV 64

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +      V +  +G    I+ G  V   G    +  S    G+V++ LG PID  D++  
Sbjct: 65  VGFKDKEVILMALGELTLIAPGCKVISNGIPLSVMCSDNLLGKVLDGLGNPIDNSDAVLG 124

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 + ++ P  M R+++    +TG+R ID FT    GQRIG+FAGSG+GKST L M 
Sbjct: 125 D--RYNLNNEPPDPMKRKKIRNIMETGVRAIDAFTTCGEGQRIGIFAGSGVGKSTTLGMI 182

Query: 182 ARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D  +I+L+GERGREV +FI+ D   + +KKSVVV ATSD++P++R    LTA  
Sbjct: 183 ARNAKADVNVIALIGERGREVLDFIDKDLGEEGMKKSVVVCATSDKAPLVRLKGALTATA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LP+L+ER G S
Sbjct: 243 IAEYFRDQGKKVILMMDSVTRFAMAQREVGVAIGEPPAQKGYTPSVFAMLPKLMERTGTS 302

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +K  G+ITA  +VLVDGD+ N+PIAD+ R ILDGHIVL+R LA +  YP +D L S+SRL
Sbjct: 303 DK--GSITAFYTVLVDGDDFNEPIADTTRGILDGHIVLSRDLANKNHYPSIDVLNSLSRL 360

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++  S ++ K+ S    ++  + E  D+  IG Y  G +  +D+A++    I +FLKQ 
Sbjct: 361 MNEIASKEDIKIASFARDMLAEYREAEDLINIGAYASGTNKKIDEAIYYHEHIINFLKQG 420

Query: 421 PSDLSSEDVFQEITKKLQ 438
            ++ SS   F E    L+
Sbjct: 421 INEKSS---FNETISSLR 435


>gi|313199688|ref|YP_004021302.1| ATP synthase CF1 alpha subunit [Theobroma cacao]
 gi|309321252|gb|ADO64795.1| ATP synthase CF1 alpha subunit [Theobroma cacao]
 gi|328924770|gb|ADO64875.2| ATP synthase CF1 alpha subunit [Theobroma cacao]
          Length = 506

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +    E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRDRIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGEGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|237739745|ref|ZP_04570226.1| ATP synthase subunit alpha [Fusobacterium sp. 2_1_31]
 gi|229423353|gb|EEO38400.1| ATP synthase subunit alpha [Fusobacterium sp. 2_1_31]
          Length = 500

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKTLEIKTSGTVLEVGDGIARIYGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRV+NALG+PIDG   +   D
Sbjct: 66  LEEDNVGAVILGYASLIKEGDEVRATGKVVSVPAGDNLLGRVVNALGEPIDGKGEII-AD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          + +V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQNVKCIYVAIGQKRSTVAQIYKKLSDLGCMEYTTIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLDLAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSPSDLSSED 428
           Q      + +
Sbjct: 422 QPQYHPYTVE 431


>gi|260886477|ref|ZP_05897740.1| ATP synthase F1, alpha subunit [Selenomonas sputigena ATCC 35185]
 gi|330839675|ref|YP_004414255.1| ATP synthase F1, alpha subunit [Selenomonas sputigena ATCC 35185]
 gi|260863620|gb|EEX78120.1| ATP synthase F1, alpha subunit [Selenomonas sputigena ATCC 35185]
 gi|329747439|gb|AEC00796.1| ATP synthase F1, alpha subunit [Selenomonas sputigena ATCC 35185]
          Length = 506

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 108/440 (24%), Positives = 186/440 (42%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N E +  + +D  KN      V   G +  I      +  L++    G+ +      
Sbjct: 1   MKMNPEEITAIIKDQIKNYNVDLNVDDVGTVIEIGDGIAHIHGLTK-AMAGELLDF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           +D  G  + ++ D V    +G   EI  G  V    +   +       GRV++ALG+PID
Sbjct: 57  NDVYGLALNLDQDDVGAVILGGDTEIKEGATVKRTKKIMQVPVGENMVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +    P   +R+ V +  +TG++ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIQAAE-HRAVEFSAPGIADRKSVHEPLQTGLKAIDGLVPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      I     +G++   V   ++          S+VV AT+ +S  L+
Sbjct: 176 TAIAVDTILNQKGQNCICVYVAIGQKASTVARVVKTLEDAGAMEYSIVVAATAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  KG + L + D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEYFMYKGGHALCVYDDLTKHAAAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I+L       G  P
Sbjct: 296 RLLERAAKLSDELGAGSITALPVIETLAGDLSAYIPTNVISITDGQIMLETDAFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D    + + +
Sbjct: 356 AINVGLSVSRVGGSAQIKAMKQVAGTLRLDLAQYRE---LAAFAQFGSDLDKATKEQLDR 412

Query: 410 VPIIYDFLKQSP-SDLSSED 428
              + + LKQ   + L+ ED
Sbjct: 413 GARMVETLKQPQYTPLAVED 432


>gi|288816877|gb|ADC55251.1| mitochondrial ATP synthase subunit alpha precursor [Litopenaeus
           vannamei]
          Length = 550

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 67  ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 122

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +  G L   +  K P  + R  
Sbjct: 123 REGDIVKRTGAIVDVPVGEAILGRVVDALGNPIDGKGPI-TGGLRARVGVKAPGIIPRIS 181

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  +       
Sbjct: 182 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAAEEKKKLYC 241

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +   + E+F   G
Sbjct: 242 IYVAIGQKRSTVAQIVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCAMGEFFRDNG 301

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 302 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDTNGGGSL 361

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 362 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 421

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E         +   +D    + +++   + + LKQ  
Sbjct: 422 AMKQVAGSMKLELAQYREA---AAFAQFGSDLDASTQQLLNRGVRLTELLKQGQ 472


>gi|47207317|emb|CAF96443.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 551

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   LG       +  K P  + R  
Sbjct: 125 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPLG-SKTRRRVGLKAPGIIPRIS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNEGTDEKKKLYC 243

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 244 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDNFGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 424 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 474


>gi|315650480|ref|ZP_07903550.1| ATP synthase F1 sector alpha subunit [Eubacterium saburreum DSM
           3986]
 gi|315487276|gb|EFU77588.1| ATP synthase F1 sector alpha subunit [Eubacterium saburreum DSM
           3986]
          Length = 499

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 105/431 (24%), Positives = 182/431 (42%), Gaps = 19/431 (4%)

Query: 1   MQKNLETLAQLAED----YSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++    YS  L V   G +  +      +  L++    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQINKYSTKLEVSDVGTVIQVADGIARIHGLAK-AMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  D V    +G  + IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -DVYGMVLNLEEDNVGAVLLGDKKNISEGDTVKTTGRVVEVPVGDALTGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I       + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-TTDTFRRIERVAHGVIERKSVDTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +++      +        I   +G++   V   ++ +        + VVV+T+ +   L+
Sbjct: 176 TSIAVDTIINQKGQNVHCIYVAIGQKASTVASIVKTFEDYGAMDYTTVVVSTASDLAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I E +  +G++VL++ D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAIGEEWMERGEDVLVVYDDLTKHAAAYRTLSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERASRLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   +   + ++ E   +     +   +D      + Q
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKIAGPIRVELAQYRE---LASFAQFGSELDEATKNQLAQ 412

Query: 410 VPIIYDFLKQS 420
              I + LKQ 
Sbjct: 413 GERIREILKQP 423


>gi|148380617|ref|YP_001255158.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           ATCC 3502]
 gi|148290101|emb|CAL84220.1| flagellum-specific ATP synthase [Clostridium botulinum A str. ATCC
           3502]
          Length = 438

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 173/434 (39%), Positives = 251/434 (57%), Gaps = 14/434 (3%)

Query: 10  QLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRIN 66
           Q  E   K  N     G +  +  +   V  +  +V  G+  +   + +  +  +V+   
Sbjct: 9   QKIEKRIKETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEVVGFK 66

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +     +
Sbjct: 67  EENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEGSPYA 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           ++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M A+  
Sbjct: 127 LD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMIAKYA 184

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  IAEY
Sbjct: 185 EADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATAIAEY 244

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S K  
Sbjct: 245 FRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMSNK-- 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL  + 
Sbjct: 303 GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRLMSEI 362

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ  S+ 
Sbjct: 363 ASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQGISEQ 422

Query: 425 SSEDVFQEITKKLQ 438
            S   F+E T  LQ
Sbjct: 423 HS---FEESTSILQ 433


>gi|226950072|ref|YP_002805163.1| flagellar protein export ATPase FliI [Clostridium botulinum A2 str.
           Kyoto]
 gi|226843623|gb|ACO86289.1| flagellar protein export ATPase FliI [Clostridium botulinum A2 str.
           Kyoto]
          Length = 438

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 171/438 (39%), Positives = 253/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           + E + +  +    N     G +  +  +   V  +  +V  G+  +   + +  +  +V
Sbjct: 7   DFEKIEKRIK--ETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +  
Sbjct: 63  VGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEG 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M 
Sbjct: 123 SPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL
Sbjct: 301 NK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ 
Sbjct: 359 MSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQG 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
            S+  S   F+E T  LQ
Sbjct: 419 ISEQHS---FEESTSILQ 433


>gi|306841067|ref|ZP_07473790.1| ATPase FliI/YscN family [Brucella sp. BO2]
 gi|306288905|gb|EFM60208.1| ATPase FliI/YscN family [Brucella sp. BO2]
          Length = 413

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 212/404 (52%), Positives = 281/404 (69%), Gaps = 2/404 (0%)

Query: 37  TCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
             LS+   LGD V  + G+ + +L ++IR+    V + P       SLG  VF  G  RI
Sbjct: 2   RGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRI 61

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
            P+  W GRVINALG  IDG  +L  G   M   S  P A+ R RV++G +TG+ VIDIF
Sbjct: 62  RPTPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIF 121

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215
           TPLC GQRIG+FAGSG+GKSTLL+M  R+  FD V+++L GERGREVRE +E+ +  +L 
Sbjct: 122 TPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGREVREMLEETMAGHLG 181

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           K++ VVAT DESP++R++AP TA  IAEYF   G NVLLI+DS+TRFAH+ RE+A  + E
Sbjct: 182 KTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEE 241

Query: 276 LPVARGYPTSVFSELPRLLERIGPSE-KEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            PVARGYP SVFS+LPRLLER GP   +  G+IT + SVLVDGD+HNDP++D++R  LDG
Sbjct: 242 PPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDG 301

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           HIVL+R++A +GR+P VD   SVSRLA   W+ +++KLV  L  ++ RFEETRD+R IG 
Sbjct: 302 HIVLDRAIAAQGRFPAVDIPGSVSRLAKHNWTPEQRKLVMQLRSMVARFEETRDLRAIGA 361

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           Y+ G D +LD+AV  VP IY+ L+QSP    S+D + ++   L+
Sbjct: 362 YQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 405


>gi|156597931|gb|ABU85233.1| ATP synthase CF1 alpha subunit [Anethum graveolens]
          Length = 507

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 185/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E+YS+ + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIEEYSREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFKDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 YRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + +         ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTNLQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEFFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 GSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|121534925|ref|ZP_01666744.1| ATP synthase F1, alpha subunit [Thermosinus carboxydivorans Nor1]
 gi|121306524|gb|EAX47447.1| ATP synthase F1, alpha subunit [Thermosinus carboxydivorans Nor1]
          Length = 513

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 172/432 (39%), Gaps = 19/432 (4%)

Query: 1   MQKNLETL----AQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E +     Q  E Y  +L V   G +  +      +  L +    G+ +      
Sbjct: 1   MKMRPEEITAIIKQQIERYQVDLNVDDVGTVIEVGDGIARIHGLEK-AMAGELLEFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D V    +G    I  GD V   GR   +       GRV+N LG+P+D
Sbjct: 57  HGVYGMVLNLEEDSVGGVLLGGETLIKEGDTVRRTGRIMEVPVGEALIGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +    P   +RQ V++  +TGI+ ID   P+  GQR  +    G GK
Sbjct: 117 GKGPIN-VTTHRPVEYPAPGIADRQSVKEPLQTGIKAIDAMIPIGRGQRELIIGDRGTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   +           ++VV AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGQGVICIYVAIGQKASTVARVVRTLEEAGAMDYTIVVAATAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V + EYF  KG +VL + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMGEYFMYKGGHVLCVYDDLSKHAQAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDALGGGSITALPIIETLAGDVSAYIPTNVISITDGQIFLESELFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AINAGISVSRVGGAAQIKAMKQVAGRLRLDMAQYRE---LAAFAQFGSDLDKATKALIDR 412

Query: 410 VPIIYDFLKQSP 421
                + LKQ  
Sbjct: 413 GQRTLEILKQPQ 424


>gi|33241053|ref|NP_875995.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81664009|sp|Q7VA63|ATPA_PROMA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33238582|gb|AAQ00648.1| ATP synthase alpha chain [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 505

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +   DY K++ V   G +  I      V  L +    G+ V  +       G  + 
Sbjct: 11  SILKKQIADYDKSVSVSNVGTVLQIGDGIARVYGLEK-AMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N LG+P+DG+  +   D
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGDAMLGRVVNPLGQPVDGNGEIATSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESLAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V + +E        + ++VV A++ E+  L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAVGQKSASVAQVVEVLREKGALEYTIVVNASASEAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               G+  +TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q+  
Sbjct: 423 QAQF 426


>gi|312793603|ref|YP_004026526.1| ATP synthase F1 subunit alpha [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312875900|ref|ZP_07735890.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311797381|gb|EFR13720.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor lactoaceticus
           6A]
 gi|312180743|gb|ADQ40913.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 507

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 171/429 (39%), Gaps = 19/429 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             + +A + +D  KN   +      G +         +  L      G+ +         
Sbjct: 7   RPDEIASIIKDQIKNYEKKIETSDVGVVIMAGDGIARIHGL-DNCMAGELLEFPNG---V 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G  +EI  G +V   GR   +       GRV+NALG+PIDG  
Sbjct: 63  YGMALNLEEDNVGCVILGNDKEIKEGTIVKRTGRVVEVPVGEELLGRVVNALGQPIDGLG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        +    P  + R+ V+   +TGI  ID   P+  GQR  +      GK+ +
Sbjct: 123 PINAKKFR-PVERIAPGVIEREPVKTPLQTGIMAIDAMIPIGRGQRELIIGDRQTGKTAI 181

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
              ++  + D     I   +G++   V + +           ++VV AT+ +S  L+ +A
Sbjct: 182 AIDTIINQKDQGVYCIYVAIGQKASTVAQIVHTLKEYGAMDYTIVVSATASDSAPLQFLA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G + L+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 242 PYAGCAMGEEFMESGKDALIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++
Sbjct: 302 ERAAKLNAQRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFYAGIRPAIN 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+   L   + ++ E         +   +D    + + Q   
Sbjct: 362 AGISVSRVGGNAQIKAMKKVAGRLRLDLAQYRELE---AFAQFGSELDKSTRERLAQGQR 418

Query: 413 IYDFLKQSP 421
           I + LKQ  
Sbjct: 419 IVETLKQPQ 427


>gi|119484689|ref|ZP_01619171.1| ATP synthase subunit A [Lyngbya sp. PCC 8106]
 gi|119457507|gb|EAW38631.1| ATP synthase subunit A [Lyngbya sp. PCC 8106]
          Length = 505

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/436 (23%), Positives = 186/436 (42%), Gaps = 17/436 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y +++ V   G +  +      +  L + +   + +  +      +G  + 
Sbjct: 11  SIIEQQIKQYDQDVKVSNVGTVLQVGDGIARIYGLDKAMS-SELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  G  V   GR   I       GR+++ALG+PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGDGHKIEEGSSVTGTGRIAEIPVGDAMLGRIVDALGRPIDGKGEIQSSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 DRL-LESPAPGIIDRRSVCEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V +             +V+V A++ E   L+ +AP     
Sbjct: 186 NQKSEDVICVYVAIGQKASTVAQVAGTLAEKGAMDYTVIVAASASEPATLQYLAPYAGAC 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V+   SVS
Sbjct: 306 NDELGGGSMTALPIIETQASDVSAYIPTNVISITDGQIFLSADLFNSGLRPAVNAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAIKKVAGKIKLELAQYSE---LAAFSQFASDLDEATRKQLSRGERLRELLK 422

Query: 419 QSPSDLSSEDVFQEIT 434
           Q  +  S   +F+++ 
Sbjct: 423 QPQN--SPLQLFEQVA 436


>gi|153934199|ref|YP_001384903.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936379|ref|YP_001388372.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           Hall]
 gi|152930243|gb|ABS35743.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932293|gb|ABS37792.1| flagellar protein export ATPase FliI [Clostridium botulinum A str.
           Hall]
          Length = 438

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 173/434 (39%), Positives = 251/434 (57%), Gaps = 14/434 (3%)

Query: 10  QLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRIN 66
           Q  E   K  N     G +  +  +   V  +  +V  G+  +   + +  +  +V+   
Sbjct: 9   QKIEKRIKETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEVVGFK 66

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +     +
Sbjct: 67  EENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEGSPYA 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           ++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M A+  
Sbjct: 127 LD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMIAKYA 184

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  IAEY
Sbjct: 185 EADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATAIAEY 244

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S K  
Sbjct: 245 FRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERTGMSNK-- 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL  + 
Sbjct: 303 GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRLMSEI 362

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ  S+ 
Sbjct: 363 ASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQGISEQ 422

Query: 425 SSEDVFQEITKKLQ 438
            S   F+E T  LQ
Sbjct: 423 HS---FEESTSILQ 433


>gi|315926957|gb|EFV06319.1| ATP synthase F1, alpha subunit [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 488

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 188/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++ + ++  +N      + + G I S+      V  L + +  G+ V  +  +
Sbjct: 1   MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL-KNIMAGEMVEFENGD 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +    V I  +G GE +  G  V    +  ++       GRV+NALG+PID
Sbjct: 60  K---GMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    +  K    M R+ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 AKGVINANEYRF-VEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++ ++       I   +G++   V + ++          ++VV A + +   L+
Sbjct: 176 TTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMEYTIVVNAGASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ E+F     + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ P    S +
Sbjct: 413 GQRMVELLKQPPYSPLSVE 431


>gi|291394323|ref|XP_002713558.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit-like [Oryctolagus cuniculus]
          Length = 553

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|209151440|gb|ACI33076.1| ATP synthase subunit alpha, mitochondrial precursor [Salmo salar]
 gi|223648354|gb|ACN10935.1| ATP synthase subunit alpha, mitochondrial precursor [Salmo salar]
          Length = 552

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 182/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   LG   +   +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEQLLGRVVDALGNAIDGKGPLGSS-IRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ E+F   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEFFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNENFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|209916091|gb|ACI95886.1| ATP synthase F1 subunit alpha [Isoetes engelmannii]
 gi|217331573|gb|ACK38299.1| ATP synthase F1 subunit alpha [Isoetes engelmannii]
          Length = 514

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 99/433 (22%), Positives = 179/433 (41%), Gaps = 24/433 (5%)

Query: 5   LETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L  L     +Y   L V + G + S+      V  L++ +  G+ V   G      G  +
Sbjct: 7   LTLLEGRITNYHTKLEVDEIGRVVSVGDGIARVYGLNR-IQAGELVEFAGGAK---GMAL 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +   G    I  GD+V   G    +       GRV++ALG PIDG  +  + 
Sbjct: 63  NLETDNVGVVIFGSDTAIREGDMVKRTGFIVDVPVGKAMLGRVVDALGVPIDGKGA-CRA 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           D    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK      T+
Sbjct: 122 DERRRVEVKAPGIIARKSVHEPMETGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 181

Query: 178 LSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           L+    +            +   +G++   V + ++        +  ++V AT+ +   L
Sbjct: 182 LNQKRINAQGTSDSERLYCVYVAIGQKRSTVAQLVKILSEAGALEYCIIVAATASDPAPL 241

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   + EYF   G + L+  D +++ + + R+++      P    +P  VF   
Sbjct: 242 QFLAPYSGCAMGEYFRDNGMHALITYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLH 301

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER          G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 302 SRLLERAAKMSDRTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIR 361

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A S   K++  SL   + ++ E   +     +   +D      ++
Sbjct: 362 PAINVGLSVSRVGSAAQSKAMKQVCGSLKLELAQYRE---VAAFAEFGSDLDAATKYLLN 418

Query: 409 QVPIIYDFLKQSP 421
           +   + + LKQ  
Sbjct: 419 RGARLTEVLKQPQ 431


>gi|325677964|ref|ZP_08157606.1| ATP synthase F1, alpha subunit [Ruminococcus albus 8]
 gi|324110518|gb|EGC04692.1| ATP synthase F1, alpha subunit [Ruminococcus albus 8]
          Length = 504

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 112/433 (25%), Positives = 180/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + +  L +   KN   +      G + ++      V  L + +  G+ +      
Sbjct: 1   MNLRPDEITGLIKSQIKNYRTKLVLDDVGTVCTVGDGISRVNGLEKCMS-GELLEFDNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E I  G  V   GR   +       GRV+NALG PID
Sbjct: 59  --TYGMAMNLEQDFVGCVLLGTEEGIREGSNVKRTGRIVSVPVGDAMLGRVVNALGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   + +  + S     + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGAILTNE-TRPVESPAFGIITRKSVSRPLQTGIKAIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           +T+      +        I   +G++   V   ++     D +  S+VV AT+ E   L+
Sbjct: 176 TTIALDTIINQKGKNVICIYVAIGQKISTVANIVDTLTKNDAMDYSIVVSATASEMAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  +G +VL + D +++ A + R ++           YP  VF    
Sbjct: 236 YIAPYAGVAMAEYFMLQGKDVLCVYDDLSKHAVAYRTMSLLLKRPTGREAYPGDVFYLHS 295

Query: 292 RLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACCLNEENGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETELFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+   L  L  ++ E +       +   +D      + Q
Sbjct: 356 AVNPGISVSRVGGSAQIKAMKKVSGPLKLLYSQYRELQ---SFSQFGSDLDQDTKDRLAQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQS +
Sbjct: 413 GERIVEVLKQSKN 425


>gi|325126850|ref|YP_004286087.1| ATP synthase CF1 alpha subunit [Fragaria vesca subsp. vesca]
 gi|324022762|gb|ADY15336.1| ATP synthase CF1 alpha subunit [Fragaria vesca subsp. vesca]
          Length = 507

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + V+  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVLNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAFLGRVVNALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTALQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|302871777|ref|YP_003840413.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574636|gb|ADL42427.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 507

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/429 (23%), Positives = 171/429 (39%), Gaps = 19/429 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             + +A + +D  KN   +      G +         +  L      G+ +         
Sbjct: 7   RPDEIASIIKDQIKNYEKKIETSDVGIVIMAGDGIARIHGL-DNCMAGELLEFPNG---V 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G  ++I  G +V   GR   +       GRV+NALG+PIDG  
Sbjct: 63  FGMALNLEEDNVGCVILGNDKDIKEGTIVKRTGRVVEVPVGEELLGRVVNALGQPIDGLG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        +    P  + R+ V+   +TGI  ID   P+  GQR  +      GK+ +
Sbjct: 123 PINAKKFR-PVERIAPGVIEREPVKTPLQTGIMAIDAMIPIGRGQRELIIGDRQTGKTAI 181

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
              ++  + D     I   +G++   V + +           ++VV AT+ +S  L+ +A
Sbjct: 182 AIDTIINQKDQGVYCIYVAIGQKASTVAQIVHTLKEYGAMDYTIVVSATASDSAPLQFLA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G + L+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 242 PYAGCAMGEEFMESGKDALIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++
Sbjct: 302 ERAAKLNAQRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFYAGIRPAIN 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+   L   + ++ E         +   +D    + + Q   
Sbjct: 362 AGISVSRVGGNAQIKAMKKVAGRLRLDLAQYRELE---AFAQFGSELDKSTRERLAQGQR 418

Query: 413 IYDFLKQSP 421
           I + LKQ  
Sbjct: 419 IVETLKQPQ 427


>gi|169794058|ref|YP_001718422.1| ATP synthase CF1 alpha subunit [Manihot esculenta]
 gi|190358184|sp|B1NWD5|ATPA_MANES RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|157695870|gb|ABV66139.1| ATP synthase CF1 alpha subunit [Manihot esculenta]
          Length = 507

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 184/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFVELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|29565568|ref|NP_817146.1| ATP synthase CF1 alpha subunit [Pinus koraiensis]
 gi|75299058|sp|Q85X67|ATPA_PINKO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|29469667|gb|AAO73995.1| H+-ATPase alpha subunit [Pinus koraiensis]
          Length = 494

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|221131162|ref|XP_002163780.1| PREDICTED: similar to ATP synthase, H+ transporting, mitochondrial
           F1 complex, alpha subunit 1, cardiac muscle [Hydra
           magnipapillata]
          Length = 545

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/427 (23%), Positives = 183/427 (42%), Gaps = 22/427 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            ++ +  SK  + + G + S+      V  L + V   + V     +S   G  + +  D
Sbjct: 50  ERILKTSSKVGLEEAGKVLSVGDGIARVYGL-KNVQAEEMVEF---SSGLKGMALNLEAD 105

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G  + I  GD+V   G    +       GRV++ALG PIDG   +        
Sbjct: 106 NVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEGLLGRVVDALGNPIDGLGPVD-CPKRAR 164

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R  V++   TGI+ +D   P+  GQR  +      GK      T+++   
Sbjct: 165 VGVKAPGIIPRTSVKEPMLTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKR 224

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
            +D  D       I   +G++   V + ++        K ++VV AT+ ++  L+ +AP 
Sbjct: 225 FNDSNDEKKKLYCIYVAIGQKRSTVAQLVKQLSDAGAMKYTIVVSATASDAAPLQYLAPY 284

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +   + EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 285 SGCAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 344

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +    G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++  
Sbjct: 345 AAKMSEAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVG 404

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   K++  S+   + ++ E   +     +   +D      +++   + 
Sbjct: 405 LSVSRVGSAAQTKAMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQALLNRGVRLT 461

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 462 ELLKQGQ 468


>gi|182420272|ref|ZP_02951501.1| ATP synthase F1, alpha subunit [Clostridium butyricum 5521]
 gi|237666496|ref|ZP_04526481.1| ATP synthase F1, alpha subunit [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182375867|gb|EDT73459.1| ATP synthase F1, alpha subunit [Clostridium butyricum 5521]
 gi|237657695|gb|EEP55250.1| ATP synthase F1, alpha subunit [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 504

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 109/430 (25%), Positives = 178/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y K +  V  G I  +      V  L      G+ +       D  G  + 
Sbjct: 10  SIIKKEIEKYEKQIKTVDSGTIIQVGDGVARVYGLDD-CMEGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD+V   G+  ++       GRV+NALG+ IDG   +   D
Sbjct: 66  LEQDNVGCVLLGSEEGIKEGDIVKGTGKIVQVPVGDALIGRVVNALGEAIDGKGPIL-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  ++R  V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 ETRAIEVPAPSIIDRSSVNEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIGIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   +           SVVV +T+ ES  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNTLTEMGAMDYSVVVSSTAAESAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMHQGKDVLIIYDDLSKHAVAYRAMSLLLKRPPGREAYPGDVFYIHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G++TA+  +     +    I  +V SI DG I L   L   G+ P ++P  SVS
Sbjct: 305 SQELGGGSLTALPIIETQAGDVTAYIPTNVISITDGQIFLEGDLFNAGQRPAINPGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E       G     +D    + + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVSGTLRLELAQYRELESFAQFG---SDLDSDSSRRLQKGKRLMEVLK 421

Query: 419 QSPSDLSSED 428
           Q        +
Sbjct: 422 QDQYQPLDVE 431


>gi|78213703|ref|YP_382482.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CC9605]
 gi|124007221|sp|Q3AHK5|ATPA_SYNSC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78198162|gb|ABB35927.1| ATP synthase F1, alpha subunit [Synechococcus sp. CC9605]
          Length = 506

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  EDY K++ V   G + ++      V  L Q    G+ +  +       G  + 
Sbjct: 11  AILKKQIEDYDKSVSVSNVGTVLTVGDGIARVYGL-QQAMAGELIEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N+LG+ IDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGYGIQEGSTVKATGKIAAVPVGEAMLGRVVNSLGRAIDGKGEIATSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     +   VG++   V   +E          +V+V A + E   L+ +AP T  T
Sbjct: 186 NQADQDMICVYVAVGQKAASVANVVEVLRERGALDYTVIVAANASEPAALQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E         +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDEL---AAFSQFASDLDASTQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|327259463|ref|XP_003214556.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like [Anolis
           carolinensis]
          Length = 553

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G    I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDRLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +        +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPI-ASKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|309390207|gb|ADO78087.1| ATP synthase F1 subcomplex alpha subunit [Halanaerobium praevalens
           DSM 2228]
          Length = 526

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/433 (23%), Positives = 184/433 (42%), Gaps = 20/433 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     E+Y + L   G G +  +      V  L +    G+ +      
Sbjct: 1   MKLRPEEISSIIKKEIENYGQKLESVGVGTVLDVGDGIAHVYGL-KDAMSGELLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G  + +  D + +  +G    I+ GD V   GR   +       GRV+N LG+P+D
Sbjct: 58  -EVFGMALNLEEDNIGVVLLGDETLIAEGDDVKRTGRVVEVPVGDALLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    + S+ P  + RQ VE   +TG++ ID  TP+  GQR  +      GK
Sbjct: 117 GKGAI-ESDTYRPVESEAPGVVERQPVEVPLQTGLKSIDAMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V +  E    +     ++VV AT+ E   +R
Sbjct: 176 TAIGIDTIINQKDNDVICIYVAIGQKNSTVAQLTERLKEEGAMDYTIVVSATASEPAPIR 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
            +AP     + E+F  + D  + ++ D +++ A + R ++      P    YP  VF   
Sbjct: 236 YIAPYAGCAMGEHFMYEDDKDVLVVYDDLSKHAVAYRSMSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 296 SRLLERAAKLNDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFFSGVR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A     K +  +L   + ++ E         +   +D    + + 
Sbjct: 356 PAVNVGISVSRVGGNAQIKAMKDVAGTLRLDLSQYRELE---AFSQFGSDLDKSTQQKLA 412

Query: 409 QVPIIYDFLKQSP 421
           +   I + LKQ  
Sbjct: 413 RGERIVEILKQKQ 425


>gi|262066571|ref|ZP_06026183.1| ATP synthase F1, alpha subunit [Fusobacterium periodonticum ATCC
           33693]
 gi|291379706|gb|EFE87224.1| ATP synthase F1, alpha subunit [Fusobacterium periodonticum ATCC
           33693]
          Length = 500

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 182/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKTLEIKTSGTVLEVGDGIARIYGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRV+N+LG+PIDG   +   D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGDNLLGRVVNSLGEPIDGKGEII-AD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          + +V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQNVKCIYVAIGQKRSTVAQIYKKLSDLGCMEYTTIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E         +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYTEL---LTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSPSDLSSED 428
           Q      + +
Sbjct: 422 QPQYHPYTVE 431


>gi|149413032|ref|XP_001506958.1| PREDICTED: similar to ATP synthase, H+ transporting, mitochondrial
           F1 complex, alpha subunit 1, cardiac muscle
           [Ornithorhynchus anatinus]
          Length = 616

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 133 ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 188

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 189 KEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 247

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 248 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 307

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 308 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 367

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 368 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNETFGGGSL 427

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 428 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 487

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 488 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 538


>gi|254973915|ref|ZP_05270387.1| flagellum-specific ATP synthase [Clostridium difficile QCD-66c26]
 gi|255091301|ref|ZP_05320779.1| flagellum-specific ATP synthase [Clostridium difficile CIP 107932]
 gi|255312959|ref|ZP_05354542.1| flagellum-specific ATP synthase [Clostridium difficile QCD-76w55]
 gi|255515718|ref|ZP_05383394.1| flagellum-specific ATP synthase [Clostridium difficile QCD-97b34]
 gi|255648812|ref|ZP_05395714.1| flagellum-specific ATP synthase [Clostridium difficile QCD-37x79]
 gi|260682031|ref|YP_003213316.1| flagellum-specific ATP synthase [Clostridium difficile CD196]
 gi|260685629|ref|YP_003216762.1| flagellum-specific ATP synthase [Clostridium difficile R20291]
 gi|306518927|ref|ZP_07405274.1| flagellum-specific ATP synthase [Clostridium difficile QCD-32g58]
 gi|260208194|emb|CBA60534.1| flagellum-specific ATP synthase [Clostridium difficile CD196]
 gi|260211645|emb|CBE01900.1| flagellum-specific ATP synthase [Clostridium difficile R20291]
          Length = 439

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 169/441 (38%), Positives = 254/441 (57%), Gaps = 14/441 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           +  + + + +  E+    L +  G +  I  +   V  +  +V  G+  V   + N    
Sbjct: 6   ISIDFDKINKKIENLE--LTISEGRVKKIIGLTVEVEGIKAFV--GELCVIYNQVNKPVN 61

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+      V +  +G    I+ G  V   G    +  S    G+V++ LG PID  D+
Sbjct: 62  CEVVGFKDKEVILMALGELTLIAPGCKVISKGIPLSVMCSDNLLGKVLDGLGNPIDNSDA 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        + ++ P  M R+++    +TG+R ID FT    GQRIG+FAGSG+GKST L
Sbjct: 122 VLGD--RYNLNNEPPDPMKRKKIRNIMETGVRAIDAFTTCGEGQRIGIFAGSGVGKSTTL 179

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREV +FI+ D   + +KKSVVV ATSD++P++R    LT
Sbjct: 180 GMIARNAKADVNVIALIGERGREVLDFIDKDLGEEGMKKSVVVCATSDKAPLVRLKGALT 239

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LP+L+ER 
Sbjct: 240 ATAIAEYFRDQGKKVILMMDSVTRFAMAQREVGIAIGEPPAQKGYTPSVFAILPKLMERT 299

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA  +VLVDGD+ N+PIAD+ R ILDGHIVL+R LA +  YP +D L S+
Sbjct: 300 GTSDK--GSITAFYTVLVDGDDFNEPIADTTRGILDGHIVLSRDLANKNHYPSIDVLNSL 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL ++  S ++ K+ S    ++  + E  D+  IG Y  G +  +D+A++    I +FL
Sbjct: 358 SRLMNEIASKEDIKIASFARDMLAEYREAEDLINIGAYASGTNKKIDEAIYYHEHIINFL 417

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           KQ  ++ SS   F E    L+
Sbjct: 418 KQGINEKSS---FNETISSLR 435


>gi|72382819|ref|YP_292174.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str.
           NATL2A]
 gi|115312262|sp|Q46J57|ATPA_PROMT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|72002669|gb|AAZ58471.1| ATP synthase F1 subcomplex alpha subunit [Prochlorococcus marinus
           str. NATL2A]
          Length = 504

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 178/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY K++ V   G +  I      V  L + V  G+ V  +       G  + 
Sbjct: 11  SILKQQIADYDKSVSVSNVGTVLQIGDGIARVYGLEK-VMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    +  G  V   G+   +       GRV+N LG+ IDG   +   D
Sbjct: 67  LEDDNVGVVLMGEALGVQEGSTVKATGKIASVPVGEAMLGRVVNPLGQQIDGKGEMATTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESIAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   +E          +++V A + E+  L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAVGQKQASVANVVEVLKEKGALDYTIIVNAGASEAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               G  ++T++  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGAGSMTSLPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQKQLGRGKRLRELLK 422

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 423 QPQFDP 428


>gi|74211977|dbj|BAE40158.1| unnamed protein product [Mus musculus]
          Length = 553

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|254557145|ref|YP_003063562.1| F0F1 ATP synthase subunit alpha [Lactobacillus plantarum JDM1]
 gi|300769659|ref|ZP_07079542.1| ATP synthase F1 sector alpha subunit [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308181148|ref|YP_003925276.1| F0F1 ATP synthase subunit alpha [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|254046072|gb|ACT62865.1| F0F1 ATP synthase subunit alpha [Lactobacillus plantarum JDM1]
 gi|300492702|gb|EFK27887.1| ATP synthase F1 sector alpha subunit [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308046639|gb|ADN99182.1| F0F1 ATP synthase subunit alpha [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 506

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G ++ +         L      G+ +          G V  
Sbjct: 10  ALIKQQLESYQTELSVAETGTVTYVGDGIARAHGL-DNALQGELLEFSNG---VYGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K  
Sbjct: 66  LESNDVGIVVLGDFDGIREGDTVKRTGRIMEVPVGDAMIGRVVNPLGQPVDGLGEI-KTT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 NTRPIEHKAPGIMQRQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSVAIDAIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   VR  +E       +  ++VV A   E   L  +AP     
Sbjct: 185 NQKDQDMICVYVAIGQKDSTVRAQVETLKKLGAMDYTIVVTAGPAEPAPLLYLAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMMNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+      G  P +D  ASVS
Sbjct: 305 SDELGGGSMTALPIIETQAGDISAYIPTNVISITDGQIFLDSDSFYSGVRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K +  +L   +  + E         +   +D      +++   I + LK
Sbjct: 365 RVGGDAQIKAMKSVAGTLRLDLASYRELE---SFSQFGSDLDAATQAKLNRGQRIVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPVH 425


>gi|110227064|ref|YP_665543.1| ATP synthase CF1 alpha chain [Populus alba]
 gi|134093182|ref|YP_001109484.1| ATP synthase CF1 alpha subunit [Populus trichocarpa]
 gi|118573484|sp|Q14FH2|ATPA_POPAL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|190358194|sp|A4GYP3|ATPA_POPTR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|109945502|dbj|BAE97190.1| ATP synthase CF1 alpha chain [Populus alba]
 gi|133712044|gb|ABO36687.1| ATP synthase CF1 alpha subunit [Populus trichocarpa]
          Length = 507

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 185/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG  ++   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGAISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNALQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER     S
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKPSS 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|312127524|ref|YP_003992398.1| ATP synthase F1 subunit alpha [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777543|gb|ADQ07029.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor hydrothermalis
           108]
          Length = 507

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 171/429 (39%), Gaps = 19/429 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             + +A + +D  KN   +      G +         +  L      G+ +         
Sbjct: 7   RPDEIASIIKDQIKNYEKKIETSDVGVVIMAGDGIARIHGL-DNCMAGELLEFPNG---V 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G  +EI  G +V   GR   +       GRV+NALG+PIDG  
Sbjct: 63  FGMALNLEEDNVGCVILGNDKEIKEGTIVKRTGRVVEVPVGEELLGRVVNALGQPIDGLG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        +    P  + R+ V+   +TGI  ID   P+  GQR  +      GK+ +
Sbjct: 123 PINAKKFR-PVERIAPGVIEREPVKTPLQTGIMAIDAMIPIGRGQRELIIGDRQTGKTAI 181

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
              ++  + D     I   +G++   V + +           ++VV AT+ +S  L+ +A
Sbjct: 182 AIDTIINQKDQGVYCIYVAIGQKASTVAQIVHTLKEYGAMDYTIVVSATASDSAPLQFLA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     + E F   G + L+I D +++ A + R ++      P    YP  VF    RLL
Sbjct: 242 PYAGCAMGEEFMESGKDALIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++
Sbjct: 302 ERAAKLNAQRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFYAGIRPAIN 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+   L   + ++ E         +   +D    + + Q   
Sbjct: 362 AGISVSRVGGNAQIKAMKKVAGRLRLDLAQYRELE---AFAQFGSELDKSTRERLAQGQR 418

Query: 413 IYDFLKQSP 421
           I + LKQ  
Sbjct: 419 IVETLKQPQ 427


>gi|92116153|ref|YP_575882.1| F0F1 ATP synthase subunit alpha [Nitrobacter hamburgensis X14]
 gi|119367958|sp|Q1QQS5|ATPA_NITHX RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91799047|gb|ABE61422.1| ATP synthase F1 subcomplex alpha subunit [Nitrobacter hamburgensis
           X14]
          Length = 510

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 179/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   +  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNIQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLETDNVGIVIFGADREIKEGQTVKRTRAIVDAPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQATE-RKRVDVKAPGIIPRKSVNEPMATGLKSIDALIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V +F++        + S++V A
Sbjct: 176 TAIALDTILNQKPLNVAGAPEGQKLYCVYVAIGQKRSTVAQFVKVLEEQGALEYSIIVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      + GN   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKLNDDHGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGSRLTELLKQPQF 434


>gi|254302781|ref|ZP_04970139.1| F-type two-sector ATPase, F(1) alpha subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322973|gb|EDK88223.1| F-type two-sector ATPase, F(1) alpha subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 500

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K+L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKSLEIKTSGTVLEVGDGIARIFGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRVINALG PIDG   + + D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGENLLGRVINALGDPIDGKGEI-RAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          +++V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQDVKCIYVAIGQKRSTVAQIYKKLSDLGCMDYTIIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|139388079|ref|YP_001123271.1| ATPase alpha subunit [Barbarea verna]
 gi|190358239|sp|A4QK90|ATPA_BARVE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134286470|dbj|BAF50095.1| ATPase alpha subunit [Barbarea verna]
          Length = 507

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++   +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVTIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTGLQERGAMEYTIVVAETADAPAALQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|331004503|ref|ZP_08327973.1| ATP synthase subunit alpha [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330410681|gb|EGG90104.1| ATP synthase subunit alpha [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 499

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 106/431 (24%), Positives = 184/431 (42%), Gaps = 19/431 (4%)

Query: 1   MQKNLETLAQLAED----YSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++    YS  L V   G +  +      +  L++    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQINKYSTKLEVSDVGTVIQVADGIARIHGLAK-AMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  D V    +G  + IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -DVYGMVLNLEEDNVGAVLLGDKKNISEGDTVKTTGRVVEVPVGDELTGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I       + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-TSDTFRRIERVAHGVIERKSVDTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +++      +     V  I   +G++   V   ++ +        + VVV+T+ +   L+
Sbjct: 176 TSIAVDTIINQKGQHVHCIYVAIGQKASTVASIVKTFEDYGAMDYTTVVVSTASDLAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I E +  +G++VL++ D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAIGEEWMERGEDVLVVYDDLTKHAAAYRTLSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERASRLSEDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   +   + ++ E   +     +   +D      + Q
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKIAGPIRVELAQYRE---LASFAQFGSELDEATKNQLAQ 412

Query: 410 VPIIYDFLKQS 420
              I + LKQ 
Sbjct: 413 GERIREILKQP 423


>gi|148378160|ref|YP_001252701.1| ATP synthase F1, alpha subunit [Clostridium botulinum A str. ATCC
           3502]
 gi|153934062|ref|YP_001382561.1| F0F1 ATP synthase subunit alpha [Clostridium botulinum A str. ATCC
           19397]
 gi|153937693|ref|YP_001386113.1| F0F1 ATP synthase subunit alpha [Clostridium botulinum A str. Hall]
 gi|168177487|ref|ZP_02612151.1| ATP synthase F1, alpha subunit [Clostridium botulinum NCTC 2916]
 gi|168182236|ref|ZP_02616900.1| ATP synthase F1, alpha subunit [Clostridium botulinum Bf]
 gi|226947378|ref|YP_002802469.1| ATP synthase F1, alpha subunit [Clostridium botulinum A2 str.
           Kyoto]
 gi|237793473|ref|YP_002861025.1| ATP synthase F1, alpha subunit [Clostridium botulinum Ba4 str. 657]
 gi|166201661|sp|A7FQH7|ATPA_CLOB1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201662|sp|A5HY50|ATPA_CLOBH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807688|sp|C1FQP3|ATPA_CLOBJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|259585424|sp|C3KYJ1|ATPA_CLOB6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148287644|emb|CAL81709.1| ATP synthase alpha chain [Clostridium botulinum A str. ATCC 3502]
 gi|152930106|gb|ABS35606.1| ATP synthase F1, alpha subunit [Clostridium botulinum A str. ATCC
           19397]
 gi|152933607|gb|ABS39106.1| ATP synthase F1, alpha subunit [Clostridium botulinum A str. Hall]
 gi|182670565|gb|EDT82539.1| ATP synthase F1, alpha subunit [Clostridium botulinum NCTC 2916]
 gi|182674508|gb|EDT86469.1| ATP synthase F1, alpha subunit [Clostridium botulinum Bf]
 gi|226842719|gb|ACO85385.1| ATP synthase F1, alpha subunit [Clostridium botulinum A2 str.
           Kyoto]
 gi|229262850|gb|ACQ53883.1| ATP synthase F1, alpha subunit [Clostridium botulinum Ba4 str. 657]
 gi|322804424|emb|CBZ01974.1| ATP synthase alpha chain [Clostridium botulinum H04402 065]
          Length = 504

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+++ N+  +  G I  I      V  L +    G+ +       D  G  + 
Sbjct: 10  SIIRQQIENFNTNIETIDSGTIIQIGDGIARVYGL-EDCMEGELIEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G++V    +   +       GRV+N+LG PIDG   +   +
Sbjct: 66  LEQDNVGCVLLGSEEGIKEGNVVKRTKKVVEVPVGEALVGRVVNSLGMPIDGKGPVLTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + ++    P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 -TRDVEVPAPGVIDRQSVKEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIAMDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   + D         ++VV +T+ +S  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNDLTKMGAMDYTIVVSSTASDSAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHKGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSRLLERSARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G++TA+  V     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SEKLGGGSLTALPIVETLAGDVTAYIPTNVISITDGQIFLESELFNAGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVAGTLRLELAQYRE---LAAFSQFGSDLDKESVKRLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|108773075|ref|YP_635984.1| ATP synthase CF1 alpha subunit [Scenedesmus obliquus]
 gi|118573490|sp|Q1KVU0|ATPA_SCEOB RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|88696641|gb|ABD48267.1| CF1 alpha subunit of ATP synthase [Scenedesmus obliquus]
          Length = 507

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 187/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +  L E+Y+  +  V  G +  +      +  L + V  G+ +  +      LG  + + 
Sbjct: 13  IKGLIEEYTPEVKMVDFGIVFQVGDGIARIYGLDR-VMSGELLEFEDG---TLGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +G G +I+ G  V   G+   I     + GRV++AL +P+DG  ++   D +
Sbjct: 69  ANNVGAVLLGDGLKITEGSRVRCTGKIAEIPVGENYLGRVVDALARPVDGKGAISTND-T 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
             I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ +   ++  +
Sbjct: 128 RAIESPAPGIVSRRSVYEPLQTGLVAVDAMIPIGRGQRELIIGDRQTGKTAIAVDTILNQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           +++V+A ++E   L+ +AP T  T+A
Sbjct: 188 KGKGVICVYVAIGQKASSVAQVLNSLKERGALDYTIIVMANANEPSTLQYLAPYTGATLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G   L I D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYTGRPTLTIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGEGSMTALPVVETQEGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  +L   + +F E         +   +D    K + +   + + LKQ 
Sbjct: 368 GSAAQIKAMKQVAGTLKLSLAQFAELE---AFSQFASDLDAATQKQLARGSRLREILKQP 424

Query: 421 PSDLSSED 428
            +   S +
Sbjct: 425 QNSPLSVE 432


>gi|30585339|gb|AAP36942.1| Homo sapiens ATP synthase, H+ transporting, mitochondrial F1
           complex, alpha subunit, isoform 1, cardiac muscle
           [synthetic construct]
 gi|60653977|gb|AAX29681.1| ATP synthase H+ transporting mitochondrial F1 complex alpha
           subunit, isoform 1, cardiac muscle [synthetic construct]
          Length = 554

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|56751186|ref|YP_171887.1| F0F1 ATP synthase subunit alpha [Synechococcus elongatus PCC 6301]
 gi|114529|sp|P08449|ATPA_SYNP6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|48017|emb|CAA28928.1| unnamed protein product [Synechococcus elongatus PCC 6301]
 gi|56686145|dbj|BAD79367.1| ATP synthase A subunit [Synechococcus elongatus PCC 6301]
          Length = 505

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E YS+++ V+  G +  +      +  L Q V  G+ V  +   +   G  + 
Sbjct: 11  SIIRQQIEQYSQDVKVENVGTVLQVGDGIARIYGL-QQVMSGELVEFEDGTT---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I       GRV++ LG P+DG   +   +
Sbjct: 67  LEEDNVGAVLMGEGRNIQEGSTVKATGKIAQIPVGDALVGRVVSPLGAPLDGKGEIAATE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 NRL-IESPAPGIIARRSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   IE          +VVV A + E   L+ +AP     
Sbjct: 186 NQKGEDVICVYVAIGQKASSVANIIEVLRERGALDYTVVVAANASEPATLQYLAPYAGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAIKKIAGTLKLELAQFDE---LAAFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|74211072|dbj|BAE37632.1| unnamed protein product [Mus musculus]
          Length = 553

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|4757810|ref|NP_004037.1| ATP synthase subunit alpha, mitochondrial precursor [Homo sapiens]
 gi|50345984|ref|NP_001001937.1| ATP synthase subunit alpha, mitochondrial precursor [Homo sapiens]
 gi|209364613|ref|NP_001129208.1| ATP synthase subunit alpha, mitochondrial precursor [Pan
           troglodytes]
 gi|114517|sp|P25705|ATPA_HUMAN RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|158514235|sp|A5A6H5|ATPA_PANTR RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|28938|emb|CAA41789.1| H(+)-transporting ATP synthase [Homo sapiens]
 gi|34468|emb|CAA46452.1| ATP synthase alpha subunit [Homo sapiens]
 gi|559317|dbj|BAA05672.1| ATP synthase alpha subunit [Homo sapiens]
 gi|559325|dbj|BAA03531.1| ATP synthase alpha subunit [Homo sapiens]
 gi|16359160|gb|AAH16046.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|17939539|gb|AAH19310.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|30583257|gb|AAP35873.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [Homo sapiens]
 gi|40352910|gb|AAH64562.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|45709753|gb|AAH67385.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
 gi|61362466|gb|AAX42227.1| ATP synthase H+ transporting mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [synthetic construct]
 gi|61362474|gb|AAX42228.1| ATP synthase H+ transporting mitochondrial F1 complex, alpha
           subunit, isoform 1, cardiac muscle [synthetic construct]
 gi|119621876|gb|EAX01471.1| hCG23783, isoform CRA_b [Homo sapiens]
 gi|123995069|gb|ABM85136.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [synthetic construct]
 gi|124126803|gb|ABM92174.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [synthetic construct]
 gi|146741384|dbj|BAF62348.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle, nuclear gene encoding
           mitochondrial protein, transcript variant 2 [Pan
           troglodytes verus]
 gi|208965840|dbj|BAG72934.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [synthetic construct]
 gi|1090507|prf||2019238A ATP synthase:SUBUNIT=alpha
          Length = 553

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|6680748|ref|NP_031531.1| ATP synthase subunit alpha, mitochondrial precursor [Mus musculus]
 gi|416677|sp|Q03265|ATPA_MOUSE RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|192090|gb|AAA37271.1| ATP synthase alpha subunit [Mus musculus]
 gi|15928789|gb|AAH14854.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1 [Mus musculus]
 gi|26336074|dbj|BAC31722.1| unnamed protein product [Mus musculus]
 gi|26345496|dbj|BAC36399.1| unnamed protein product [Mus musculus]
 gi|74139449|dbj|BAE40864.1| unnamed protein product [Mus musculus]
 gi|74139497|dbj|BAE40887.1| unnamed protein product [Mus musculus]
 gi|74139568|dbj|BAE40921.1| unnamed protein product [Mus musculus]
 gi|74141985|dbj|BAE41056.1| unnamed protein product [Mus musculus]
 gi|74142000|dbj|BAE41063.1| unnamed protein product [Mus musculus]
 gi|74151623|dbj|BAE41160.1| unnamed protein product [Mus musculus]
 gi|74177731|dbj|BAE38962.1| unnamed protein product [Mus musculus]
 gi|74178233|dbj|BAE29901.1| unnamed protein product [Mus musculus]
 gi|74181518|dbj|BAE30027.1| unnamed protein product [Mus musculus]
 gi|74184829|dbj|BAE39039.1| unnamed protein product [Mus musculus]
 gi|74185320|dbj|BAE30136.1| unnamed protein product [Mus musculus]
 gi|74185496|dbj|BAE30216.1| unnamed protein product [Mus musculus]
 gi|74189075|dbj|BAE39300.1| unnamed protein product [Mus musculus]
 gi|74197158|dbj|BAE35125.1| unnamed protein product [Mus musculus]
 gi|74197967|dbj|BAE35167.1| unnamed protein product [Mus musculus]
 gi|74204241|dbj|BAE39881.1| unnamed protein product [Mus musculus]
 gi|74204548|dbj|BAE35349.1| unnamed protein product [Mus musculus]
 gi|74207217|dbj|BAE30798.1| unnamed protein product [Mus musculus]
 gi|74207463|dbj|BAE30910.1| unnamed protein product [Mus musculus]
 gi|74213551|dbj|BAE35585.1| unnamed protein product [Mus musculus]
 gi|74219557|dbj|BAE29549.1| unnamed protein product [Mus musculus]
 gi|74219781|dbj|BAE40482.1| unnamed protein product [Mus musculus]
 gi|74223116|dbj|BAE40697.1| unnamed protein product [Mus musculus]
 gi|74223137|dbj|BAE40707.1| unnamed protein product [Mus musculus]
 gi|74223216|dbj|BAE40744.1| unnamed protein product [Mus musculus]
 gi|74225278|dbj|BAE31573.1| unnamed protein product [Mus musculus]
 gi|148677497|gb|EDL09444.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_a [Mus musculus]
          Length = 553

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|149390253|ref|YP_001294083.1| ATP synthase CF1 alpha subunit [Chloranthus spicatus]
 gi|190358285|sp|A6MMA7|ATPA_CHLSC RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|146744173|gb|ABQ43245.1| ATP synthase CF1 alpha subunit [Chloranthus spicatus]
          Length = 507

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 181/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISAYESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV   +D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|28378940|ref|NP_785832.1| F0F1 ATP synthase subunit alpha [Lactobacillus plantarum WCFS1]
 gi|81631036|sp|Q88UU1|ATPA_LACPL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|28271777|emb|CAD64683.1| H(+)-transporting two-sector ATPase, alpha subunit [Lactobacillus
           plantarum WCFS1]
          Length = 504

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G ++ +         L      G+ +          G V  
Sbjct: 10  ALIKQQLESYQTELSVAETGTVTYVGDGIARAHGL-DNALQGELLEFSNG---VYGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K  
Sbjct: 66  LESNDVGIVVLGDFDGIREGDTVKRTGRIMEVPVGDAMIGRVVNPLGQPVDGLGEI-KTT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 NTRPIEHKAPGIMQRQSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSVAIDAIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   VR  +E       +  ++VV A   E   L  +AP     
Sbjct: 185 NQKDQDMICVYVAIGQKDSTVRAQVETLKKLGAMDYTIVVTAGPAEPAPLLYLAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMMNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+      G  P +D  ASVS
Sbjct: 305 SDELGGGSMTALPIIETQAGDISAYIPTNVISITDGQIFLDSDSFYSGVRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K +  +L   +  + E         +   +D      +++   I + LK
Sbjct: 365 RVGGDAQIKAMKSVAGTLRLDLASYRELE---SFSQFGSDLDAATQAKLNRGQRIVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPVH 425


>gi|78777602|ref|YP_393917.1| F0F1 ATP synthase subunit alpha [Sulfurimonas denitrificans DSM
           1251]
 gi|124007225|sp|Q30QP9|ATPA_SULDN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78498142|gb|ABB44682.1| ATP synthase F1, alpha subunit [Sulfurimonas denitrificans DSM
           1251]
          Length = 505

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 111/438 (25%), Positives = 187/438 (42%), Gaps = 19/438 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++   N      + + G I S       V  LS  V  G+ V  +    
Sbjct: 4   KIQADEISSIIKERIDNFELSVDINETGKIVSYADGVAQVYGLS-NVMAGEMVEFEEG-- 60

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G V+ +    V +  +G G  +  G  V   GR  R+       GRV+NALG+PIDG
Sbjct: 61  -TRGLVMNLEESTVGVVILGPGPLLKEGMSVKRLGRLLRVPVGDALLGRVVNALGEPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +    +  K P  M R+ V +   TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGPIETTETRF-VEEKAPGIMARKSVHEPLATGIKAIDALVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +   +    I   VG++   V + I           ++VV +T+ E+  L+ 
Sbjct: 179 TVALDAIINQKGNGVVCIYVAVGQKESTVAQIIRRLEDHGAMEYTIVVSSTAAEAAALQF 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    R
Sbjct: 239 LAPYTGVTMGEYFRDNARHGLIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYIHSR 298

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E+G  ++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERAAKVSDERGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNSGVRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 359 INVGLSVSRVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFAQFASDLDETSRKQLERG 415

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ P    S +
Sbjct: 416 QRMVEVLKQPPFSPLSVE 433


>gi|297591975|ref|NP_001172071.1| ATP synthase subunit alpha, mitochondrial [Sus scrofa]
 gi|187370717|gb|ACD02421.1| cardiac muscle ATP synthase H+ transporting mitochondrial F1
           complex alpha subunit 1 [Sus scrofa]
          Length = 553

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|114107118|ref|YP_740102.1| ATP synthase CF1 alpha subunit [Daucus carota]
 gi|122239970|sp|Q0G9X7|ATPA_DAUCA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|113200893|gb|ABI32409.1| ATP synthase CF1 alpha subunit [Daucus carota]
          Length = 507

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 186/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E+Y++ + +V  G +  +      +  L + V  G+ V  Q      +G  + 
Sbjct: 11  KIIRERIEEYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFQEG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESTNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 YRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEFFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 GSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|82701442|ref|YP_411008.1| F0F1 ATP synthase subunit alpha [Nitrosospira multiformis ATCC
           25196]
 gi|115312224|sp|Q2YCA5|ATPA1_NITMU RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|82409507|gb|ABB73616.1| ATP synthase F1 subcomplex alpha subunit [Nitrosospira multiformis
           ATCC 25196]
          Length = 513

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MHLNPSEISELIKSRIEGLEATAEVRTQGTVVSVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHITEGDTVKCTGRILEVPVGEELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-TTKHSEPIEKIAPGVVWRQSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +   +    I   +G++   +   +           ++VV AT+ ES  ++
Sbjct: 176 TAVAVDAIINQKGENMICIYVAIGQKASSISNVVRKLEEHGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF   G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYSGCTMGEYFRDTGRDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSAAYVEKETNGAVKGKTGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +  ++ + +KQ      S
Sbjct: 413 LDEATRKQLERGKMVTELMKQPQYSTLS 440


>gi|153938471|ref|YP_001391960.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
           Langeland]
 gi|152934367|gb|ABS39865.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
           Langeland]
 gi|295319979|gb|ADG00357.1| flagellar protein export ATPase FliI [Clostridium botulinum F str.
           230613]
          Length = 438

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 170/438 (38%), Positives = 252/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           + E + +  +    N     G +  +  +   V  +  +V  G+  +   + +  +  +V
Sbjct: 7   DFEKIEKRIK--ETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +  
Sbjct: 63  VGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEG 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M 
Sbjct: 123 SPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL
Sbjct: 301 NK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDVLSSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ 
Sbjct: 359 MSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQG 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +  S   F+E T  LQ
Sbjct: 419 IGEQHS---FEESTSILQ 433


>gi|78188123|ref|YP_378461.1| F0F1 ATP synthase subunit alpha [Chlorobium chlorochromatii CaD3]
 gi|115312241|sp|Q3AUA7|ATPA_CHLCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78170322|gb|ABB27418.1| ATP synthase F1 subcomplex alpha subunit [Chlorobium
           chlorochromatii CaD3]
          Length = 526

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 103/445 (23%), Positives = 176/445 (39%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      A+ Y        G +  +      V  L++ V  G+ +       + +G
Sbjct: 14  LRKQLANFESEADVYD------VGTVLQVGDGIARVYGLTK-VAAGELLEFPN---NVMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G    +  GD V   G    I       GRVIN LG+PIDG   +
Sbjct: 64  MALNLEEDNVGAVLFGESTMVKEGDTVKRSGILASIPVGEAMLGRVINPLGEPIDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
               L + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 D-AKLRLPLERRAPGVIYRKSVHEPLQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAVAL 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
               +        I   +G +G  + + +      D L  + V+ AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVFCIYVAIGLKGSTIAQVVSTLEKYDALSYTTVIAATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              T+ EYF   G + L+I D +++ A S R+++      P    YP  VF    RLLER
Sbjct: 243 AGATLGEYFRDTGRHALVIYDDLSKQAVSYRQVSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDVEVAKKMNDLPDALKPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNSGQRPAINVGISVSRVGGAAQIKAMKKIAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKTTKAQLDRGARLVEILKQGQ 444


>gi|225378695|ref|ZP_03755916.1| hypothetical protein ROSEINA2194_04365 [Roseburia inulinivorans DSM
           16841]
 gi|225209532|gb|EEG91886.1| hypothetical protein ROSEINA2194_04365 [Roseburia inulinivorans DSM
           16841]
          Length = 502

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/435 (23%), Positives = 178/435 (40%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K    Q      G +  +      +  L      G+ +   G  
Sbjct: 1   MNLKPEEISSVIKEQIKRYAAQLEVADVGTVIQVADGIARIHGL-DNAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G  + I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGAVLLGNQKNINEGDTVKTTGRVVEVPVGDAMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D   +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETDRYRQIERVASGVISRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++          + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQNVKCIYVAIGQKASTVASLVKTLEEFGAMSYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMEAGQDVLIVYDDLSKHAAAYRTLSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARLSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+ + +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKIAAPIRVELAQYRE---LAAFAQFGSELDADTTEKLAQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ     
Sbjct: 413 GERIREILKQPQYQP 427


>gi|112253900|ref|YP_717155.1| ATPase subunit 1 [Brassica napus]
 gi|37591102|dbj|BAC98904.1| ATPase subunit 1 [Brassica napus]
          Length = 507

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/441 (22%), Positives = 180/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + + LKQ  
Sbjct: 415 AATQALLNRGARLTEVLKQPQ 435


>gi|170699472|ref|ZP_02890515.1| ATP synthase F1, alpha subunit [Burkholderia ambifaria IOP40-10]
 gi|170135621|gb|EDT03906.1| ATP synthase F1, alpha subunit [Burkholderia ambifaria IOP40-10]
          Length = 513

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 111/446 (24%), Positives = 184/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV AT+ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAATASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|21674843|ref|NP_662908.1| F0F1 ATP synthase subunit alpha [Chlorobium tepidum TLS]
 gi|81790591|sp|Q8KAW8|ATPA_CHLTE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|21648064|gb|AAM73250.1| ATP synthase F1, alpha subunit [Chlorobium tepidum TLS]
          Length = 526

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 175/445 (39%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      A+ Y        G +  +      +  LS+ V  G+ +       + +G
Sbjct: 14  LRKQLAGFESEADVYD------VGTVLQVGDGIARIYGLSK-VAAGELLEFP---HNVMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G    +  GD V        I       GRVIN LG+PIDG   +
Sbjct: 64  MALNLEEDNVGAVLFGESNAVKEGDTVKRTNILASIPVGEAMLGRVINPLGEPIDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D+ + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 N-TDIRLPLERRAPGVIFRKSVHEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAVAL 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +      + I   +G +G  V + +           + VV AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVQCIYVAIGLKGSTVAQVVNTLEKYGAMEYTTVVSATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              TI E+F   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGATIGEFFRDTGRHALVVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVAKKMNDLPEPLKPLVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNAGQRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKSTKAQLDRGARLVEILKQGQ 444


>gi|299135449|ref|ZP_07028639.1| ATP synthase F1, alpha subunit [Afipia sp. 1NLS2]
 gi|298589857|gb|EFI50062.1| ATP synthase F1, alpha subunit [Afipia sp. 1NLS2]
          Length = 510

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 179/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGL-DNVQAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
               G  + +  D V I   G   EI  G  V                GRV++ALG PID
Sbjct: 59  --TRGMALNLESDNVGIVIFGADREIKEGQTVKRTRAIVDTPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIQATE-RKRVDVKAPGIIPRKSVSEPMATGLKAVDALIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V +F++        + S++V A
Sbjct: 176 TAIALDTILNQKPLNVAGAPESQKLYCVYVAIGQKRSTVAQFVKVLEEQGALEYSIIVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP T  T+ EYF   G + ++I D +++ A + R+++      P    Y
Sbjct: 236 TASDPAPMQYLAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G++TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSAKLNDSLGSGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
               + +++   + + LKQ   
Sbjct: 413 ASTQRLLNRGSRLTELLKQPQF 434


>gi|222139890|ref|YP_002519957.1| ATP synthase CF1 alpha chain [Ephedra equisetina]
 gi|220983558|dbj|BAH11325.1| ATP synthase CF1 alpha chain [Ephedra equisetina]
          Length = 507

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 101/436 (23%), Positives = 188/436 (43%), Gaps = 19/436 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             + ++ L  D  +       V+  G +  +      +  L   V  G+ V  +      
Sbjct: 5   RPDEISSLIRDQIEQYNNEVQVINMGIVLQVGDGIARIHGL-CEVMAGELVEFEDG---T 60

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G  + +  + V +  +G G  I  G  V   G+  +I  S  + GR+++AL +PIDG  
Sbjct: 61  IGIALNLETNNVGVVLMGDGLTIKEGGSVKATGKIAQIPVSDAFLGRIVDALAQPIDGRG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   ++ + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ +
Sbjct: 121 PISASEVRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 179

Query: 178 LSMFARSDCFDKVI--ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
            +    +     VI     +G++   V + ++      +++ ++VV   +D    L+ +A
Sbjct: 180 ATDTILNQKGQNVICVYVAIGQKASSVAQVVKTLRERSSIEYTIVVSEPADSPATLQYLA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   +AEYF  K  + L+I D +++ A + R+++      P    YP  VF    RLL
Sbjct: 240 PYTGAALAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLL 299

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++
Sbjct: 300 ERAAKLNNQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++   L   + +F E         +   +D      + +   
Sbjct: 360 VGLSVSRVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKGTQDQLARGQR 416

Query: 413 IYDFLKQSPSDLSSED 428
           + + LKQ  +   S +
Sbjct: 417 LRELLKQPQAAPLSVE 432


>gi|170747039|ref|YP_001753299.1| ATP synthase F1, alpha subunit [Methylobacterium radiotolerans JCM
           2831]
 gi|226739910|sp|B1LVH1|ATPA_METRJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|170653561|gb|ACB22616.1| ATP synthase F1, alpha subunit [Methylobacterium radiotolerans JCM
           2831]
          Length = 510

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 179/442 (40%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+         L   V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIKNFGEEAEVSEVGQVLSVGDGIARAYGL-DNVQAGEMVEFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +  D V I   G   EI  G  V   G    +       GRV++ALG PID
Sbjct: 57  SGVRGMALNLEQDNVGIVIFGSDREIKEGQTVKRTGAIVDVPVGKGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQSTE-RRRVDVKAPGIIPRKSVHEPMATGLKAIDALIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD-----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 I   +G++   V +F++        + S+V+ A
Sbjct: 176 TAIALDTILNQKPGHTAGGDEKAKLYCIYVAIGQKRSTVAQFVKVLEDQGALEYSIVIAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ ++  ++ +AP     + EYF   G + +++ D +++ A + R+++      P    Y
Sbjct: 236 TASDAAPMQFIAPFAGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER        G  ++TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAAKMGDAAGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D
Sbjct: 356 DLFYQGVRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
                 +++   + + LKQ   
Sbjct: 413 ASTQALLNRGSRLTELLKQPQF 434


>gi|15030240|gb|AAH11384.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
          Length = 553

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|27807237|ref|NP_777109.1| ATP synthase subunit alpha, mitochondrial precursor [Bos taurus]
 gi|114402|sp|P19483|ATPA_BOVIN RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|262118380|pdb|2W6E|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118381|pdb|2W6E|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118382|pdb|2W6E|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118387|pdb|2W6F|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118388|pdb|2W6F|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118389|pdb|2W6F|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118394|pdb|2W6I|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118395|pdb|2W6I|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118396|pdb|2W6I|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118403|pdb|2W6J|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118404|pdb|2W6J|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118405|pdb|2W6J|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262306974|pdb|2W6G|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306975|pdb|2W6G|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306976|pdb|2W6G|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306981|pdb|2W6H|A Chain A, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306982|pdb|2W6H|B Chain B, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306983|pdb|2W6H|C Chain C, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|102|emb|CAA45865.1| H(+)-transporting ATP synthase [Bos taurus]
 gi|162721|gb|AAB59266.1| alpha subunit ATP synthase isoform precursor (EC 3.6.1.34) [Bos
           taurus]
          Length = 553

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|314908370|gb|ADT62132.1| ATP synthase subunit 1 [Isoetes engelmannii]
          Length = 514

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/433 (23%), Positives = 180/433 (41%), Gaps = 24/433 (5%)

Query: 5   LETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L  L     +Y   L V + G + S+      V  L++ +  G+ V   G      G  +
Sbjct: 7   LTLLEGRITNYHTKLEVDEIGRVVSVGDGIARVYGLNR-IQAGELVEFAGGAK---GMAL 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +   G    I  GD+V   G    +       GRV++ALG PIDG  +  + 
Sbjct: 63  NLETDNVGVVIFGSDTAIREGDMVKRTGFIVDVPVGKAMLGRVVDALGVPIDGKGA-CRA 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           D    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK      T+
Sbjct: 122 DERRRVEVKAPGIIARKSVHEPMETGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 181

Query: 178 LSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           L+    +            +   +G++   V + ++        +  ++V AT+ +   L
Sbjct: 182 LNQKRINAQGTSDSERLYCVYVAIGQKRSTVAQLVKILSEAGALEYCIIVAATASDPAPL 241

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   + EYF   G + L+I D +++ + + R+++      P    +P  VF   
Sbjct: 242 QFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLH 301

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER          G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 302 SRLLERAAKMSDRTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIR 361

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A S   K++  SL   + ++ E   +     +   +D      ++
Sbjct: 362 PAINVGLSVSRVGSAAQSKAMKQVCGSLKLELAQYRE---VAAFAEFGSDLDAATKYLLN 418

Query: 409 QVPIIYDFLKQSP 421
           +   + + LKQ  
Sbjct: 419 RGARLTEVLKQPQ 431


>gi|308274350|emb|CBX30949.1| ATP synthase subunit alpha [uncultured Desulfobacterium sp.]
          Length = 505

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 109/439 (24%), Positives = 190/439 (43%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAE----DYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++Q+ +    DY K + + + G + S+      V  L + + L + V   G  
Sbjct: 1   MELRAEEISQIIKGQIADYDKKVELSETGVVLSVGDGIARVYGLEKAMSL-ELVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              LG V+ +  D V I  +G    I  GD+V   GR  ++       GRV++A+G+PID
Sbjct: 59  --ILGLVLNLEEDNVGIAVMGEVTHIKEGDVVKRTGRIAQVPVGEPVLGRVVSAVGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +    P  + R+ V +   TG++ ID  TP+  GQR  +     IGK
Sbjct: 117 GKGPIDAKEFRR-VEMVAPGVIARKSVHESMLTGLKAIDAMTPVGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   S+ ++       I    G++   V + +           + VV A + +   L+
Sbjct: 176 TAVAIDSILSQKGQNVYCIYVACGQKKSTVAQVVSVLEKHGAMEYTTVVAACASDPATLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG + L+I D +++ A + R+++      P    YP  +F    
Sbjct: 236 YVAPYAGCAMGEYFRDKGQHALIIYDDLSKQAAAYRQVSLLLRRPPGREAYPGDIFYNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L  SL   G  P
Sbjct: 296 RLLERSCKLNDDLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLEPSLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  SL   + ++ E       G     +D    + + +
Sbjct: 356 AINVGLSVSRVGGAAQVKAMKQVAGSLRLDLAQYRELEAFAAFG---SDLDKATQRQLTR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 413 GARLVEILKQPQYKPLSME 431


>gi|291543822|emb|CBL16931.1| ATP synthase F1 subcomplex alpha subunit [Ruminococcus sp. 18P13]
          Length = 504

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 105/433 (24%), Positives = 187/433 (43%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + +  + ++  K+   Q      G + ++     T+  L + +  G+ +  +G  
Sbjct: 1   MDLRPDEITGIIKEQLKHYHAQLELNDVGTVVTVGDGIATIHGLDKCMS-GELLEFEGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G   +I  G  V   GR   +       GRV+NALG+PID
Sbjct: 59  --VQGMALNLEQDFVGAVMLGSDRDIKEGAAVKRTGRIVSVPVGEELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   + +  +       + R+ V K  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGAILTHE-TAPVEKVASGIITRKSVHKPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V   +E        + ++VV AT+ E   L+
Sbjct: 176 TAIALDTIINQHDKDVICIYVAIGQKRSTVANVVETLEKAGAMRYTIVVSATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF ++G +VL + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFLAQGKDVLCVYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACSLNEKYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  SL     ++ E +       +   +D    + + +
Sbjct: 356 AVNPGISVSRVGSAAQIKAMKKVSGSLKLSYSQYRELQ---AFSQFGSDLDQDTKERLAK 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ+ +
Sbjct: 413 GERIVEVLKQNRN 425


>gi|68565056|sp|Q85FN4|ATPA_ADICA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|48475986|gb|AAP29377.2| ATP synthase CF1 alpha chain [Adiantum capillus-veneris]
          Length = 507

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 185/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y   + VV  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 12  SIIRKQIKGYVPEMKVVNIGTVLQVGDGIARIHGLDE-VMAGELVEFEDG---TVGIALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 68  LESDNVGAVLMGDGLTIREGGSVRATGKIAQIPVSDSFLGRVVNALAQPIDGKGQIPASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 128 FRL-IESSAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 186

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + ++ +      + ++VV  T++    L+ +AP T   
Sbjct: 187 NQKGQNVICVYVAIGQKASSVAQVVDTFRERGALEYTIVVSETANSPATLQYLAPYTGAA 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 307 STQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 367 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKTTQNQLARGQRLRELLK 423

Query: 419 QSPS 422
           QS S
Sbjct: 424 QSQS 427


>gi|293375571|ref|ZP_06621845.1| ATP synthase F1, alpha subunit [Turicibacter sanguinis PC909]
 gi|325836785|ref|ZP_08166252.1| ATP synthase F1, alpha subunit [Turicibacter sp. HGF1]
 gi|292645788|gb|EFF63824.1| ATP synthase F1, alpha subunit [Turicibacter sanguinis PC909]
 gi|325491163|gb|EGC93452.1| ATP synthase F1, alpha subunit [Turicibacter sp. HGF1]
          Length = 499

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 177/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  ++Y + L V + G + ++      V  L Q V  G+ +      S  +G    
Sbjct: 10  AILREQIKNYEQVLDVTETGTVLTVGDGIARVHGL-QNVMAGEIIEFA---SGAVGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    IS GD V   GR   +       GRV++ALG PIDG   +    
Sbjct: 66  LEEDNVGVIILGEYRSISEGDEVKRTGRIMSVPVGEALIGRVVDALGNPIDGLGPIDTNK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 +K    M R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 YR-PTEAKATGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAIAVDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   +E     D +  ++VV A++ +   +  +AP + V 
Sbjct: 185 NQKGQDVICIYVAIGQKESTVNSVVETLKKHDAMNYTIVVSASASQPSPMLYVAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMYAGKHVLIIYDDLSKQAAAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  +A +V SI DG I L       G  P +D   SVS
Sbjct: 305 NDELGAGSITALPFIETQAGDLSAYVATNVISITDGQIFLKSDYFHSGIRPAIDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDESTRAKLARGERTVEVLK 421

Query: 419 QSPSDL 424
           Q  +  
Sbjct: 422 QGVNQP 427


>gi|309322411|ref|YP_003934491.1| ATP synthase CF1 alpha chain [Cathaya argyrophylla]
 gi|307683337|dbj|BAJ19644.1| ATP synthase CF1 alpha chain [Cathaya argyrophylla]
          Length = 507

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 176/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L Q V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDQ-VMAGELVEF---GDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGAVLMGDGLMIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA- 182
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIP 185

Query: 183 -RSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G+ TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSATALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKEVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSP 421
           QS 
Sbjct: 423 QSQ 425


>gi|170759167|ref|YP_001785483.1| F0F1 ATP synthase subunit alpha [Clostridium botulinum A3 str. Loch
           Maree]
 gi|226739862|sp|B1KSS6|ATPA_CLOBM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169406156|gb|ACA54567.1| ATP synthase F1, alpha subunit [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 504

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+++ N+  +  G I  I      V  L +    G+ +       D  G  + 
Sbjct: 10  SIIRQQIENFNTNIETIDSGTIIQIGDGIARVYGL-EDCMEGELIEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G++V    +   +       GRV+N+LG PIDG   +   +
Sbjct: 66  LEQDNVGCVLLGSEEGIKEGNVVKRTKKVVEVPVGEALVGRVVNSLGMPIDGKGPVLTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + ++    P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 -TRDVEVPAPGVIDRQSVKEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIAMDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   + D         ++VV +T+ +S  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNDLTKMGAMDYTIVVSSTASDSAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHKGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSRLLERSARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G++TA+  V     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SEKLGGGSLTALPIVETLAGDVTAYIPTNVISITDGQIFLESELFNAGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVAGTLRLELAQYRE---LAAFSQFGSDLDKESVKRLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|90076152|dbj|BAE87756.1| unnamed protein product [Macaca fascicularis]
          Length = 553

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLESDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     N  K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDANAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|84683665|ref|ZP_01011568.1| ATP synthase subunit A [Maritimibacter alkaliphilus HTCC2654]
 gi|84668408|gb|EAQ14875.1| ATP synthase subunit A [Rhodobacterales bacterium HTCC2654]
          Length = 513

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 186/447 (41%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G++ S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQASEISAILKDQIKNFGQEAEVAEVGHVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V        +       GRV++ LG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDRDIKEGDTVKRTNSIVDVPVGDALLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + ++    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIEAKERAVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
                 T+L+  + +D            +   VG++   V + ++       ++ S++V 
Sbjct: 176 TAVALDTILNQKSYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEETGAIEYSIIVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP TA  + EYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQYLAPYTATAMGEYFRDNGRHALMIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + + +   + + +KQ      +
Sbjct: 413 DAATQQLLARGARLTELMKQPQYSPLT 439


>gi|91785735|ref|YP_560941.1| F0F1 ATP synthase subunit alpha [Burkholderia xenovorans LB400]
 gi|118573469|sp|Q13SQ0|ATPA2_BURXL RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|91689689|gb|ABE32889.1| ATP synthase F1, alpha subunit [Burkholderia xenovorans LB400]
          Length = 513

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 107/446 (23%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDA-IEKIAPGVIWRKSVSEPVQTGLKSIDAMVPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAVDTIINQKGKNLFCIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEDYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|127798841|gb|AAH39135.2| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Homo sapiens]
          Length = 553

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLLRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|312135224|ref|YP_004002562.1| ATP synthase F1 subunit alpha [Caldicellulosiruptor owensensis OL]
 gi|311775275|gb|ADQ04762.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor owensensis OL]
          Length = 507

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 99/423 (23%), Positives = 169/423 (39%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K +     G +         +  L      G+ +          G  + 
Sbjct: 13  SIIKEQIKNYEKKVETSDVGVVIMAGDGIARIHGL-DNCMAGELLEFPNG---VFGMALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  +EI  G +V   GR   +       GRV+NALG+PIDG   +    
Sbjct: 69  LEEDNVGCVILGNDKEIKEGTIVKRTGRVVEVPVGEELLGRVVNALGQPIDGLGPINAKK 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               +    P  + R+ V+   +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 129 FR-PVERIAPGVIEREPVKTPLQTGIIAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V + +           ++VV AT+ +S  L+ +AP     
Sbjct: 188 NQKDQGVYCIYVAIGQKASTVAQIVHTLKEYGAMDYTIVVSATASDSAPLQFLAPYAGCA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G + L+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMESGKDALIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NAQRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFYAGIRPAINAGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + ++ E         +   +D    + + Q   I + LK
Sbjct: 368 RVGGNAQIKAMKKVAGRLRLDLAQYRELE---AFAQFGSELDKSTRERLAQGQRIVETLK 424

Query: 419 QSP 421
           Q  
Sbjct: 425 QPQ 427


>gi|238927415|ref|ZP_04659175.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
 gi|238884697|gb|EEQ48335.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
          Length = 457

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 167/420 (39%), Positives = 238/420 (56%), Gaps = 14/420 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDIVYICPVGIGE 79
            G ++ I  +   +      V +G+        S       +V+      V + PVG  +
Sbjct: 32  TGKVTQIIGLV--IESQGPTVTVGELCYVSSHFSGMPPVPAEVVGFREGSVLLMPVGEMQ 89

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   GR  R+       GRV++ LG PIDG   +   +     +   PP + R
Sbjct: 90  GIGPGCEVVATGRRLRVKVGMELLGRVLDGLGNPIDGKGPILAKEEY--PLQAPPPPLTR 147

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            R+      G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+   D  +I+LVGER
Sbjct: 148 PRIHDNLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEADISVITLVGER 207

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVR+FI  D   + LK+SVVVVATSD+  ++R    +T   IAEYF  +G  V+L++D
Sbjct: 208 GREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFRDQGRRVVLMMD 267

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G SEK  G+IT + +VLVDG
Sbjct: 268 SVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTSEK--GSITGIYTVLVDG 325

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L+SVSR+  +       +    + 
Sbjct: 326 DDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLSSVSRVMYEVVEKRHLEAAQEMR 385

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  ++E  D+  IG Y  G    +D A+ ++  I +FL Q   +++S   ++E  ++L
Sbjct: 386 QLMAVYQEAEDLIHIGAYVKGSSPKIDAAIQKIDGINEFLCQGIYEVTS---YEETEQRL 442


>gi|296473661|gb|DAA15776.1| ATP synthase subunit alpha, mitochondrial precursor [Bos taurus]
          Length = 553

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|296157537|ref|ZP_06840372.1| ATP synthase F1, alpha subunit [Burkholderia sp. Ch1-1]
 gi|295892309|gb|EFG72092.1| ATP synthase F1, alpha subunit [Burkholderia sp. Ch1-1]
          Length = 513

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 108/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDA-IEKIAPGVIWRKSVSEPVQTGLKSIDAMVPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKNLFCIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|307731461|ref|YP_003908685.1| ATP synthase F1 subunit alpha [Burkholderia sp. CCGE1003]
 gi|307585996|gb|ADN59394.1| ATP synthase F1, alpha subunit [Burkholderia sp. CCGE1003]
          Length = 513

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 108/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDA-IEKIAPGVIWRKSVSEPVQTGLKSIDAMVPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKNLFCIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|187925865|ref|YP_001897507.1| F0F1 ATP synthase subunit alpha [Burkholderia phytofirmans PsJN]
 gi|187717059|gb|ACD18283.1| ATP synthase F1, alpha subunit [Burkholderia phytofirmans PsJN]
          Length = 513

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 107/446 (23%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDA-IEKIAPGVIWRKSVSEPVQTGLKSIDAMVPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKNLFCIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEDYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|260429477|ref|ZP_05783454.1| ATP synthase F1, alpha subunit [Citreicella sp. SE45]
 gi|260420100|gb|EEX13353.1| ATP synthase F1, alpha subunit [Citreicella sp. SE45]
          Length = 512

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/438 (22%), Positives = 180/438 (41%), Gaps = 25/438 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  +++ K   V + G + S+      V  L   V  G+ V   G     +G  + 
Sbjct: 10  AILKEQIQNFGKEAEVAEVGRVLSVGDGIARVHGL-DSVKAGEMVEFPGG---IMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G   +I  GDLV         P      GRV++ LG P+DG   +   +
Sbjct: 66  LEADNVGVVIFGSDRDIKEGDLVKRTNAIVDVPAGEALLGRVVDGLGNPLDGKGPIAASE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 126 RRIA-DVKAPGIIPRKSVHEPMATGLKAVDAMIPIGRGQRELIIGDRQTGKTAIALDAIL 184

Query: 184 SDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           +                  I   +G++   V + ++       +  S+VV AT+ +   +
Sbjct: 185 NQKSYNDAAGDNESKKLYCIYVAIGQKRSTVAQLVKRLEATGAIDYSIVVAATASDPAPM 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP  A  +AEYF   G + L+I D +++ A + R+++      P    YP  VF   
Sbjct: 245 QFLAPYAATAMAEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 304

Query: 291 PRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     ++ G  ++TA+  +   G + +  I  +V SI DG I L   L  +G  
Sbjct: 305 SRLLERSAKLNEDHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFFQGIR 364

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A +     +   +   + ++ E   +     +   +D    + ++
Sbjct: 365 PAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDLDAATQRLLN 421

Query: 409 QVPIIYDFLKQSPSDLSS 426
           +   + + +KQ      +
Sbjct: 422 RGARLTELMKQPQYSPLT 439


>gi|297275252|ref|XP_001089681.2| PREDICTED: ATP synthase subunit alpha, mitochondrial [Macaca
           mulatta]
          Length = 553

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLESDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|294783125|ref|ZP_06748449.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 1_1_41FAA]
 gi|294480003|gb|EFG27780.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 1_1_41FAA]
          Length = 500

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 112/430 (26%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKTLEIKTSGTVLEVGDGIARIYGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRVIN+LG+PIDG   +   D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGDNLLGRVINSLGEPIDGKGEII-AD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          + +V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQNVKCIYVAIGQKRSTVAQIYKKLSDLGCMEYTTIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLDLAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSPSDLSSED 428
           Q      + +
Sbjct: 422 QPQYHPYTVE 431


>gi|168183272|ref|ZP_02617936.1| flagellar protein export ATPase FliI [Clostridium botulinum Bf]
 gi|237796099|ref|YP_002863651.1| flagellar protein export ATPase FliI [Clostridium botulinum Ba4
           str. 657]
 gi|182673660|gb|EDT85621.1| flagellar protein export ATPase FliI [Clostridium botulinum Bf]
 gi|229261134|gb|ACQ52167.1| flagellar protein export ATPase FliI [Clostridium botulinum Ba4
           str. 657]
          Length = 438

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 170/438 (38%), Positives = 252/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           + E + +  +    N     G +  +  +   V  +  +V  G+  +   + +  +  +V
Sbjct: 7   DFEKIEKRIK--ETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +  
Sbjct: 63  VGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEG 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M 
Sbjct: 123 SPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL
Sbjct: 301 NK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ 
Sbjct: 359 MSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQG 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +  S   F+E T  LQ
Sbjct: 419 IGEQHS---FEESTSILQ 433


>gi|118411031|ref|YP_874426.1| ATP synthase CF1 alpha chain [Phaeodactylum tricornutum]
 gi|125987714|sp|A0T0F1|ATPA_PHATC RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|116739778|gb|ABK20649.1| ATP synthase CF1 alpha chain [Phaeodactylum tricornutum]
          Length = 505

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 185/428 (43%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y +++ V   G +  +      V  L Q V  G+ +  + K    +G  + 
Sbjct: 11  SIIREQIEKYDQDVKVDNIGTVLQVGDGIARVYGLDQ-VMSGELLEFEDK---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   GR  +I     + GRV++ LG  IDG   +   D
Sbjct: 67  LENDNVGVVLMGTGRQILEGSTVKATGRIAQIPVGDEFLGRVVSPLGVAIDGKGEIVTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + +  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      
Sbjct: 127 SRL-LEAMAPGIISRKSVCEPLQTGITSIDAMIPIGRGQRELIIGDRQTGKTSIAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   + + +      N    ++VV +++++   L+ +AP     
Sbjct: 186 NQQTEDVICVYVGVGQKASTIAQVVNVLEEKNAMSYTIVVASSANDPATLQYIAPYAGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG   L++ D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKATLIVYDDLTKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDKLGGGSMTALPIIETQASDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQTKAMKKVAGKLKLELAQFAELE---AFSQFASDLDEATQKQLARGTRLREVLK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|15896121|ref|NP_349470.1| F0F1 ATP synthase subunit alpha [Clostridium acetobutylicum ATCC
           824]
 gi|20137590|sp|Q9Z689|ATPA_CLOAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|15025913|gb|AAK80810.1|AE007784_7 FoF1-type ATP synthase alpha subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|4323566|gb|AAD16424.1| ATP synthase subunit alpha [Clostridium acetobutylicum ATCC 824]
 gi|325510275|gb|ADZ21911.1| F0F1 ATP synthase subunit alpha [Clostridium acetobutylicum EA
           2018]
          Length = 505

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 114/423 (26%), Positives = 181/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    E Y   L  V  G I  I      +  L Q    G+ +       D  G  + 
Sbjct: 10  SIIKSQIEGYESKLETVDSGTIIEIGDGIARIYGL-QNCMAGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD+V   G+   +       GRV+NALG+PIDG   + K +
Sbjct: 66  LEQDNVGCVLLGSEEGIKEGDIVKSTGKVVEVPVGEEMLGRVVNALGQPIDGKGPI-KAE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  +  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 DSKPVDIKATGVIDRQSVNQPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIAIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   +  +        S+VV AT+ +S  L+ +AP + VT
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNTFEEMGAMDYSIVVAATASDSAPLQYLAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IAENFMFKGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G+ITA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SQKLGGGSITALPIIETLAGDVAGYIPTNVISITDGQIFLESELFYAGQRPAVNSGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KKL  +L   + ++ E   +     +   +D    K + +   + + +K
Sbjct: 365 RVGGSAQIKAMKKLSGTLRLELAQYRE---LAAFAQFGSDLDKESKKRLEKGKRLTEMMK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|126320697|ref|XP_001364704.1| PREDICTED: similar to ATP synthase alpha subunit [Monodelphis
           domestica]
          Length = 553

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDTFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|260434493|ref|ZP_05788463.1| ATP synthase F1, alpha subunit [Synechococcus sp. WH 8109]
 gi|260412367|gb|EEX05663.1| ATP synthase F1, alpha subunit [Synechococcus sp. WH 8109]
          Length = 506

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  EDY K++ V   G + ++      V  L Q    G+ +  +       G  + 
Sbjct: 11  AILKKQIEDYDKSVSVSNVGTVLTVGDGIARVYGL-QQAMAGELIEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N+LG+ IDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGYGIQEGSTVKATGKIAAVPVGEAMLGRVVNSLGRAIDGKGEIATSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     +   VG++   V   +E          +V+V A + E   L+ +AP T  T
Sbjct: 186 NQADQDMICVYVAVGQKAASVANVVEVLRERGALDYTVIVAANASEPAALQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDASTQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|114769418|ref|ZP_01447044.1| F0F1 ATP synthase subunit alpha [alpha proteobacterium HTCC2255]
 gi|114550335|gb|EAU53216.1| F0F1 ATP synthase subunit alpha [alpha proteobacterium HTCC2255]
          Length = 511

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 103/446 (23%), Positives = 177/446 (39%), Gaps = 28/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MSIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVHGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G  + I  GD V        +       GRV++ LG PID
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDQSIKEGDTVKRTNAIVDVPVGPELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K         K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTKKRSTADVKAPGIIPRKSVHEPMATGLKSVDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 I   VG++   V + ++          ++VV A
Sbjct: 176 TAVALDTILNQKAYNDVAKDDKEKLFCIYVAVGQKRSTVAQLVKKLEETGALAYTIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP  A ++ EYF   G + L+I D +T+ A + R+++      P    Y
Sbjct: 236 TASDPAPMQFLAPYAATSMGEYFRDNGMHGLMIYDDLTKQAVAYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G++TA+  +   G + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSAKLGDNSGNGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   K +  S+   + ++ E   +     +   +D
Sbjct: 356 ELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGSIKLELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
               + + +   + + LKQ      +
Sbjct: 413 ASTQQLLARGERLTELLKQPQYSPLT 438


>gi|84500102|ref|ZP_00998368.1| ATP synthase subunit A [Oceanicola batsensis HTCC2597]
 gi|84392036|gb|EAQ04304.1| ATP synthase subunit A [Oceanicola batsensis HTCC2597]
          Length = 512

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 180/442 (40%), Gaps = 30/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ +    Q AE      V + G + S+      V  L   V  G+ V   G      G
Sbjct: 12  LKEQISNFGQEAE------VAEVGRVLSVGDGIARVHGL-DSVQAGEMVEFPGG---IRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V I   G   +I  GD V         P      GRV++ LG P+DG   +
Sbjct: 62  MALNLETDNVGIVIFGSDRDIKEGDTVKRTNSIVDVPAGEGLLGRVVDGLGNPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  +    K P  + R+ V +   TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 122 EASERRIA-DVKAPGIIPRKSVHEPMATGLKAIDAMIPIGRGQRELIIGDRQTGKTAVAL 180

Query: 180 MFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
               +                  +   VG++   V + ++       ++ S+VV AT+ +
Sbjct: 181 DSILNQKSYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEETGAIEYSIVVAATASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    YP  V
Sbjct: 241 PAPMQFLAPYAATAMAEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER     +E   G++TA+  +   G + +  I  +V SI DG I L   L  
Sbjct: 301 FYLHSRLLERSAKLNEENGGGSLTALPLIETQGGDVSAFIPTNVISITDGQIFLETELFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +D    
Sbjct: 361 QGVRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDLDAATQ 417

Query: 405 KAVHQVPIIYDFLKQSPSDLSS 426
           + +++   + + +KQ      +
Sbjct: 418 RLLNRGARLTELMKQPQYSPLT 439


>gi|118579043|ref|YP_900293.1| F0F1 ATP synthase subunit alpha [Pelobacter propionicus DSM 2379]
 gi|118579928|ref|YP_901178.1| F0F1 ATP synthase subunit alpha [Pelobacter propionicus DSM 2379]
 gi|190358192|sp|A1ALL5|ATPA_PELPD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118501753|gb|ABK98235.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter propionicus
           DSM 2379]
 gi|118502638|gb|ABK99120.1| ATP synthase F1 subcomplex alpha subunit [Pelobacter propionicus
           DSM 2379]
          Length = 502

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 189/439 (43%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++ +   +       V + G I SI      +  LS     G+ +   G  
Sbjct: 1   MKIRAEEISEIIKKQIREYGKEVEVSETGTIISIGDGIARIHGLS-GAMAGELLEFPGGV 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           S   G V+ +  D V    +G    I  G  V   GR   +       GRV+NA+G+PID
Sbjct: 60  S---GMVLNLEEDNVGAAVLGEFTAIKEGHTVKRTGRIAEVPVGEALIGRVVNAIGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D   ++  K P  + R+ V++   +G++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTDTFSKVEIKAPGIVARKSVDQPMASGLKAVDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + +           ++VV A++ ES  L+
Sbjct: 176 TAVAVDTIINQKGGDVICIYVAIGQKRSTVAQVVAKLSDHGAMDYTIVVAASASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP + VT+ EYF  KG + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYSGVTMGEYFRDKGQHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKLSDECGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+  KA +   K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGKAQTKSMKQVAGTLRLNLAQYRE---MAAFAQFGSDLDKATQMQLAR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 413 GERLVEILKQPQYRPLSNE 431


>gi|13518443|ref|NP_084803.1| ATP synthase CF1 alpha subunit [Lotus japonicus]
 gi|23813720|sp|Q9BBS3|ATPA_LOTJA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|13358984|dbj|BAB33201.1| ATPase alpha subunit [Lotus japonicus]
          Length = 510

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIEQYNTEIKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEGYLGRVINALAKPIDGRGEISSSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     VG++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAVGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|172072932|ref|YP_001806693.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
 gi|171854951|dbj|BAG16691.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
 gi|239794319|dbj|BAH73316.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
 gi|239794402|dbj|BAH73398.1| ATP synthase CF1 alpha subunit [Cryptomeria japonica]
          Length = 507

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + VV  G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVQVVNIGTVLQVGDGIARIHGLDK-VMAGELVEFVDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALARPIDGKGKISSSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 S--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +  +     +   +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKNQNVICVYVAIGQKASSVAQVVNTFEDRGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKEQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSQLGGGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIQPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +  E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQMKAMKQVAGKLKLELAQLAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS SD  + +
Sbjct: 423 QSQSDPLTVE 432


>gi|94574274|gb|AAI16060.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Bos taurus]
          Length = 553

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|295678135|ref|YP_003606659.1| ATP synthase F1, alpha subunit [Burkholderia sp. CCGE1002]
 gi|295437978|gb|ADG17148.1| ATP synthase F1, alpha subunit [Burkholderia sp. CCGE1002]
          Length = 513

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L    ++  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLN-AKMTDAIEKIAPGVIWRKSVSEPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ +S  ++
Sbjct: 176 TAVAVDAIINQKGKNLVCIYVAIGQKASSIMNVVRKLEESGALEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|95929973|ref|ZP_01312713.1| ATP synthase F1, alpha subunit [Desulfuromonas acetoxidans DSM 684]
 gi|95133942|gb|EAT15601.1| ATP synthase F1, alpha subunit [Desulfuromonas acetoxidans DSM 684]
          Length = 502

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 102/435 (23%), Positives = 185/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ + +   +N      V + G I S+      +  L + +  G+ +   G  
Sbjct: 1   MEIKAEEISAIIKKQIENFGREVEVSETGSIISVGDGIARIHGLDKAMS-GELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G ++ +  D V    +G  E I  GD V    +  R+       GRV+N +G  ID
Sbjct: 59  --TMGMILNLEEDNVGAAILGDSEHIKEGDTVKRTEQIVRVPVGESLIGRVVNGIGIAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D   ++  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GQGEI-KSDNYGQVEVKAPGIVARKSVHEPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + ++          ++VV AT+ +   L+
Sbjct: 176 TAVAVDTIINQKGQDVVCIYVAIGQKRSTVAQVVDKLKQHGAMDYTIVVAATASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VT+ EYF   G + L+I D +++ A + R+++      P    +P  VF    
Sbjct: 236 FIAPYTGVTMGEYFRDNGKHALIIYDDLSKQAVAYRQLSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKVNDDLGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D    K + +
Sbjct: 356 AINVGLSVSRVGGSAQVKAMKQVAGTLRLALAQYRE---MAAFAQFGSDLDAATQKQLQR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GERLVEILKQGQYQP 427


>gi|313903638|ref|ZP_07837028.1| ATP synthase F1 subcomplex alpha subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466191|gb|EFR61715.1| ATP synthase F1 subcomplex alpha subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 521

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 108/436 (24%), Positives = 175/436 (40%), Gaps = 19/436 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  +     +N   +      G +  I+    TV  L + V   + V      
Sbjct: 1   MSIRPEEITAIIRQQIENFEGRAELEDVGTVIQISDGVATVYGLEK-VMASELVEFPKSG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V +  +G   +I  GD V   GR  ++       GRV+N LG+PID
Sbjct: 60  --VYGMALNLAEDSVGVVVLGPYTDIKEGDEVRRTGRIIQVPVGPELLGRVVNPLGQPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++     +  I S  P  + RQ V +  +TG + ID   P+  GQR  +      GK
Sbjct: 118 GGPAINAT-RTRPIESPAPGVIVRQSVNQPLQTGWKAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L      +  D     +   +G++   V   +E          ++VV AT+ +   L 
Sbjct: 177 TALAVDTIINQKDQNVICVYVAIGQKASTVAGVVETLRKYGAMDYTIVVSATASQPAPLL 236

Query: 232 KMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
            +AP     + EYF  +   +VL+I D +T+ A + RE+A      P    YP  VF   
Sbjct: 237 YIAPYAGCAMGEYFMYEEHRDVLVIYDDLTKQAWAYRELALLLRRPPGREAYPGDVFYLH 296

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 297 SRLLERAARLSDEVGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLESDLFYSGVR 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D   SVSR+   A     K++   L   + ++ E   +     +   +D      + 
Sbjct: 357 PAIDVGRSVSRVGSAAQIKAMKQVAGRLRLDLAQYRE---LAAFAQFGSDLDKATQARLA 413

Query: 409 QVPIIYDFLKQSPSDL 424
           +   + + LKQ     
Sbjct: 414 RGQRVTEILKQGEHQP 429


>gi|89112876|gb|ABD61050.1| ATPase alpha subunit [Lamium sp. Qiu 95019]
          Length = 431

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 176/417 (42%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 QLKAMKEVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 410


>gi|194214643|ref|XP_001916279.1| PREDICTED: similar to ATP synthase subunit alpha, mitochondrial
           [Equus caballus]
          Length = 553

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|218439572|ref|YP_002377901.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. PCC 7424]
 gi|226739866|sp|B7KKR4|ATPA_CYAP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218172300|gb|ACK71033.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 7424]
          Length = 503

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L Q     + +  +      +G  + 
Sbjct: 11  SIIRQQIESYDQQVQVSNVGTVLQVGDGTARIYGL-QQAMAQELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   GR  ++        R+++ALG+PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGSGYGIQEGSTVKATGRIAQVPVGEALVSRIVDALGRPIDGKGPINTNE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-LESPAPGIVARKSVCEPMQTGITAIDAMIPVGRGQRELIIGDRKTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + ++          +VVV A++++   L+ +AP T  T
Sbjct: 186 NQKGEDVICVYVAIGQKASTVAQVVDTLTEKGAMDYTVVVSASANDPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+I+      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAQAYRQISLLMRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NDQLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQAQLARGQRLREVLK 422

Query: 419 QSPS 422
           Q  +
Sbjct: 423 QPQN 426


>gi|312622351|ref|YP_004023964.1| ATP synthase F1 subunit alpha [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202818|gb|ADQ46145.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 507

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 172/423 (40%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K +     G +         +  L      G+ +          G  + 
Sbjct: 13  SIIKEQIKNYEKKIDTSDVGVVIMSGDGIARIHGL-DNCMAGELLEFPNG---VYGMALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  +EI  G +V   GR   +       GRV+NALG+PIDG   +    
Sbjct: 69  LEEDNVGCVILGNDKEIKEGTIVKRTGRVVEVPVGEELLGRVVNALGQPIDGLGPINAKK 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               +    P  + R+ V    +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 129 FR-PVERIAPGVIEREPVNTPLQTGIMAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V + +           ++VV AT+ +S  L+ +AP     
Sbjct: 188 NQKDQGVYCIYVAIGQKASTVAQIVHTLKEYGAMDYTIVVSATASDSAPLQFLAPYAGCA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           + E F   G + L+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMESGKDALIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E+  G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NAERGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFYAGVRPAINAGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  KA +   KK+   L   + ++ E         +   +D    + + Q   I + LK
Sbjct: 368 RVGGKAQTKAMKKVAGRLRLDLAQYRELE---AFAQFGSELDKSTRERLAQGQRIVETLK 424

Query: 419 QSP 421
           Q  
Sbjct: 425 QPQ 427


>gi|168180916|ref|ZP_02615580.1| flagellar protein export ATPase FliI [Clostridium botulinum NCTC
           2916]
 gi|182668289|gb|EDT80268.1| flagellar protein export ATPase FliI [Clostridium botulinum NCTC
           2916]
          Length = 438

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 170/438 (38%), Positives = 252/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           + E + +  +    N     G +  +  +   V  +  +V  G+  +   + +  +  +V
Sbjct: 7   DFEKIEKRIK--ETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +  
Sbjct: 63  VGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEG 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M 
Sbjct: 123 SPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL
Sbjct: 301 NK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ 
Sbjct: 359 MSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESILSFLKQG 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +  S   F+E T  LQ
Sbjct: 419 IGEQHS---FEESTSILQ 433


>gi|257042577|gb|ACV32849.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL  PIDG   +   +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAXPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|254798617|ref|YP_003058335.1| CF1 alpha subunit of ATP synthase [Parachlorella kessleri]
 gi|229915565|gb|ACQ90908.1| CF1 alpha subunit of ATP synthase [Parachlorella kessleri]
          Length = 506

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + +  V  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIKQQIEQYQQEVKAVNVGTVFQVGDGIARIYGLDK-VMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GRV+N+L +PIDG   +   +
Sbjct: 67  LETKNVGAVLMGEGTSVQEGSSVRATGKIAQIPVGDGYLGRVVNSLARPIDGKGEISTTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 NRL-IESSAPGIISRRSVHEPLQTGIVAIDSMIPIGRGQRELIIGDRQTGKTAIAVDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V AT+D    L+ +AP T   
Sbjct: 186 NQKGKDVVCVYVAIGQKASSIAQVVNTLQDRGAMDYTIIVAATADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRHTLVIYDDLTKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 NDKLGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|169142866|ref|YP_001687289.1| ATP synthase subunit alpha [Oenothera glazioviana]
 gi|190358189|sp|B0Z550|ATPA_OENGL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|159895478|gb|ABX10043.1| ATP synthase subunit alpha [Oenothera glazioviana]
          Length = 507

 Score =  316 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 181/421 (42%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             + VI     +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGNNVICVYVAIGQKASSVAQVVNALQERGAMEYTIVVAEAADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|170694318|ref|ZP_02885472.1| ATP synthase F1, alpha subunit [Burkholderia graminis C4D1M]
 gi|170140741|gb|EDT08915.1| ATP synthase F1, alpha subunit [Burkholderia graminis C4D1M]
          Length = 513

 Score =  316 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 107/446 (23%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDA-IEKIAPGVIWRKSVSEPVQTGLKSIDAMVPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKNLFCIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEDYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|18075728|emb|CAD11283.1| ATP synthase F1, subunit alpha [Helicobacter pylori]
          Length = 503

 Score =  316 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 185/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q  LE ++ + E+  KN        Q G + S       V  L+  +   + +  +  + 
Sbjct: 3   QLKLEEISSVIEEKIKNFELDCDMAQVGKVVSYADGVAKVYGLNGVMSY-EVLEFETGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +  D V +   G G  I     V       ++       GRV+NALG+PIDG
Sbjct: 62  ---GVAANLEEDSVGVIVFGFGNNIKERTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGEIETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKT 177

Query: 176 TLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +     VI     +G++   V + +           SVV+ A++ +S  ++ 
Sbjct: 178 TVAIDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + V + EYF     + L+I D +++ A + REI+      P    +P  VF    R
Sbjct: 238 LAPYSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ+P
Sbjct: 415 QRMVEVLKQAP 425


>gi|11465708|ref|NP_053852.1| ATP synthase CF1 alpha subunit [Porphyra purpurea]
 gi|1703661|sp|P51242|ATPA_PORPU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|1276708|gb|AAC08128.1| ATP synthase CF1 alpha chain [Porphyra purpurea]
          Length = 504

 Score =  316 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      V  L + V  G+ +  + K    +G  + 
Sbjct: 11  SIIRQQIEKYDQDVEVANIGTVLQVGDGIARVYGLDE-VMAGELLEFEDK---TIGVALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   G+  +I     + GRV++ L +PID        +
Sbjct: 67  LESDNVGVVLMGDGRDILEGSSVKGTGKIAQIPVGDAFLGRVVDPLARPIDNKGE-PASN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S  P  + RQ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 126 GTRLIESMAPGIIGRQSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAVALDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           +++V A +D    L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKASSVAQVVSSLQEKGALDYTIIVTANADSPATLQYIAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSDLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREILK 422

Query: 419 QSPS 422
           Q+ +
Sbjct: 423 QAQN 426


>gi|170756775|ref|YP_001779782.1| F0F1 ATP synthase subunit alpha [Clostridium botulinum B1 str.
           Okra]
 gi|226739861|sp|B1IE32|ATPA_CLOBK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169121987|gb|ACA45823.1| ATP synthase F1, alpha subunit [Clostridium botulinum B1 str. Okra]
          Length = 504

 Score =  316 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+++ N+  +  G I  I      V  L +    G+ +       D  G  + 
Sbjct: 10  SIIRQQIENFNTNIETIDSGTIIQIGDGIARVYGL-EDCMEGELIEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G++V    +   +       GRV+N+LG PIDG   +   +
Sbjct: 66  LEQDNVGCVLLGAEEGIKEGNVVKRTKKVVEVPVGEALVGRVVNSLGMPIDGKGPVLTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + ++    P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 -TRDVEVPAPGVIDRQSVKEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIAMDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   + D         ++VV +T+ +S  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNDLTKMGAMDYTIVVSSTASDSAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHKGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSRLLERSARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G++TA+  V     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SEKLGGGSLTALPIVETLAGDVTAYIPTNVISITDGQIFLESELFNAGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVAGTLRLELAQYRE---LAAFSQFGSDLDKESVKRLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|302392949|ref|YP_003828769.1| ATP synthase F1 subunit alpha [Acetohalobium arabaticum DSM 5501]
 gi|302205026|gb|ADL13704.1| ATP synthase F1 subcomplex alpha subunit [Acetohalobium arabaticum
           DSM 5501]
          Length = 509

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 100/426 (23%), Positives = 181/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  EDY   L  +  G + S+      +  L +    G+ +      S   G V+ 
Sbjct: 10  SIIKKRIEDYDVKLETEDVGTVLSVGDGIAQIHGLEE-AMAGELLQFA---SGVYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D +    +G   +I  GD V   G    +       GRV+NALG+PIDG   +   D
Sbjct: 66  LEEDSIGCVILGDETKIEEGDRVERTGELVDVPVGEDMIGRVVNALGEPIDGKGPIN-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               I S+ P  + R  VE   +TG++ +D   P+  GQR  +      GK+++   ++ 
Sbjct: 125 KKRSIESEAPNVIERTPVEVPLQTGLKAVDSLVPIGRGQRELIIGDRQTGKTSIGIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V + ++    +     +++V A + +   L+ +AP     
Sbjct: 185 NQKDNDVICIYVAIGQKASTVAQVVDRLENNQAMDHTIIVAANASDPAPLQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYDGKDVLVVYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDMGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFHSGVRPAINVGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A  +  K +  +L   + ++ E         +   +D    + + +   I + LK
Sbjct: 365 RVGGDAQVSAMKDVAGTLRLDLSQYRELE---AFAQFGSDLDEATQQKLARGDRIIEVLK 421

Query: 419 QSPSDL 424
           Q  ++ 
Sbjct: 422 QPENNP 427


>gi|323527843|ref|YP_004229996.1| ATP synthase F1 subunit alpha [Burkholderia sp. CCGE1001]
 gi|323384845|gb|ADX56936.1| ATP synthase F1, alpha subunit [Burkholderia sp. CCGE1001]
          Length = 513

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 108/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDA-IEKIAPGVIWRKSVSEPVQTGLKSIDAMVPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKNLFCIYVAIGQKASSIMNVVRKLEEMGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|169142716|ref|YP_001687143.1| ATP synthase subunit alpha [Oenothera argillicola]
 gi|169143037|ref|YP_001687457.1| ATP synthase subunit alpha [Oenothera parviflora]
 gi|190358187|sp|B0Z4N2|ATPA_OENAR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|190358190|sp|B0Z5D4|ATPA_OENPA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|159792954|gb|ABW98710.1| ATP synthase subunit alpha [Oenothera argillicola]
 gi|159895563|gb|ABX10127.1| ATP synthase subunit alpha [Oenothera parviflora]
          Length = 505

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 181/421 (42%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             + VI     +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGNNVICVYVAIGQKASSVAQVVNALQERGAMEYTIVVAEAADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|55824814|gb|AAV66489.1| F1-ATPase alpha subunit [Lamourouxia viscosa]
          Length = 424

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 174/413 (42%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 405


>gi|15226092|ref|NP_178788.1| ATP synthase alpha chain, mitochondrial, putative [Arabidopsis
           thaliana]
 gi|20198280|gb|AAM15496.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250994|gb|AEC06088.1| F-type H+-transporting ATPase subunit alpha [Arabidopsis thaliana]
          Length = 777

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 179/440 (40%), Gaps = 28/440 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           ++    L  L E   +N          G + S+      V  L++ +  G+ V+      
Sbjct: 274 ERRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG-- 330

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PIDG
Sbjct: 331 -VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDG 389

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+
Sbjct: 390 KGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKT 448

Query: 176 TLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           T+      +                 +   +G++   V + I+     N  + S++V AT
Sbjct: 449 TIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAAT 508

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 509 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 568

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 569 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 628

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D 
Sbjct: 629 LFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDA 685

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
                +++   + +  KQ  
Sbjct: 686 ATQALLNRGARLTEVPKQPQ 705


>gi|46447031|ref|YP_008396.1| type III secretion system ATPase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400672|emb|CAF24121.1| probable type III secretion pathway protein sctN [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 454

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 231/422 (54%), Gaps = 12/422 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I+ I  +   +  +   V +G+  + +        +V+    D V + P+G    
Sbjct: 37  TVNGRITEIVGML--IKAVVPQVKIGEVCLIKRAGDPLRAEVVGFTKDEVLLSPLGEMTG 94

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSMEIMSKVPPAMN 137
           I     V        I       GR++N LG+P+D      L   + +  ++   P  + 
Sbjct: 95  IGPSSEVIPTHLPLHIKVGPQLLGRILNGLGEPLDEETKGPLILEE-TYPVIQAPPDPVK 153

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  +      GIR ID       GQR+G+FA +G GKSTLL M AR+   D  +ISL+GE
Sbjct: 154 RMPIHNPISVGIRAIDGVLTTGLGQRVGIFAAAGGGKSTLLGMIARNAVADVNVISLIGE 213

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE+REFI +D   + LK+SV+VV+TSD++  LR  A      IAEYF  +G +V+L++
Sbjct: 214 RGRELREFIEKDLGPEGLKRSVLVVSTSDQASQLRLNAAYVGTAIAEYFRDQGKSVILMM 273

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLER G S+K  G+ITA  ++LV 
Sbjct: 274 DSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGNSDK--GSITAFYTILVA 331

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+P+AD VRSILDGHI+L+  LA +  YP +D L+S SR+ +     +  +LV  L
Sbjct: 332 GDDMNEPVADEVRSILDGHIILSSELARQYHYPAIDVLSSASRVMNAIVPKEHLQLVGKL 391

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             ++  +++   +  IG Y+ G D   D A+  +  +  FLKQ   +  S   FQE  + 
Sbjct: 392 KEVLANYKKNELLIKIGEYKRGADKAGDFAIDYIEKVLKFLKQGVDEKCS---FQETVQL 448

Query: 437 LQ 438
           L+
Sbjct: 449 LK 450


>gi|15616318|ref|NP_244623.1| F0F1 ATP synthase subunit alpha [Bacillus halodurans C-125]
 gi|14916532|sp|Q9K6H3|ATPA_BACHD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|10176380|dbj|BAB07475.1| ATP synthase alpha subunit [Bacillus halodurans C-125]
          Length = 502

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 108/430 (25%), Positives = 179/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E++  ++ VQ  G +  +         L + V  G+ +         +G    
Sbjct: 10  SLIKQQIENFQSDVQVQDVGTVIRVGDGIALAHGL-ESVMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+PIDG   + +  
Sbjct: 66  LEENNVGIIILGPYSEIREGDEVKRTGRIMEVPVGEELLGRVVNPLGQPIDGRGPI-ETS 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIESPAPGVMDRKSVHEPLQTGIKSIDSMIPVGRGQRELIIGDRQTGKTSIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V   +E          ++VV A++ E   L  +AP   V+
Sbjct: 185 NQKDQDMICIYVAIGQKESTVAGVVETLRQHGALDYTIVVSASASEPAPLLFLAPYAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 SDAKGGGSITALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFYSGVRPAVNAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q   +    +
Sbjct: 422 QGLHEPLPVE 431


>gi|290490176|gb|ADD31495.1| ATP synthase CF1 alpha subunit protein [Lonicera japonica]
          Length = 507

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y++ + +V  G +  +      +  L + V  G+ V         +G  + + 
Sbjct: 13  IRQRIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEF---GEGTIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIASSEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T  ++A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFREKRAMEYTIVVAETADSPATLQYLAPYTGASLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGLSVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E     +   +   ++      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLDLAQFTELE---VFAQFSSDLEKTTQNQLARGRRLRELLKQS 424

Query: 421 PSDL 424
            ++ 
Sbjct: 425 QANP 428


>gi|170077357|ref|YP_001733995.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. PCC 7002]
 gi|169885026|gb|ACA98739.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7002]
          Length = 505

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 175/428 (40%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      +  L Q    G+ +  +      +G  + 
Sbjct: 11  SIIRQQIESYDQKVQVDNVGTVLQVGDGIARIYGLEQ-AMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +I  G  V   GR   I       GRV++AL +PIDG   +   D
Sbjct: 67  LEEDNVGAVLMGDGRDIQEGSSVKSTGRIAEIPVGEAIVGRVVDALARPIDGKGDIDATD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IEFMAPGIIARRSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAVAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V + +           +VVV A +++   L+ +AP T   
Sbjct: 186 NQKGEDVICVYVAVGQKASTVAQVVSTLESKGALDYTVVVAANANDPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L++ D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVVYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F E         +   +D      + +   +   LK
Sbjct: 366 RVGSAAQTKAMKKVAGKLKLELAQFAELE---AFAQFASDLDAATQNQLARGQRLRQILK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPLS 430


>gi|164597823|ref|NP_084695.2| ATP synthase CF1 alpha subunit [Oenothera elata subsp. hookeri]
 gi|172045794|sp|Q9MTL7|ATPA_OENEH RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|162423690|emb|CAB67160.2| ATP synthase subunit alpha [Oenothera elata subsp. hookeri]
          Length = 505

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 181/421 (42%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             + VI     +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGNNVICVYVAIGQKASSVAQVVNALQERGAMEYTIVVAEAADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|313183807|ref|YP_004021650.1| ATP synthase CF1 alpha subunit [Prunus persica]
 gi|309321419|gb|ADO64960.1| ATP synthase CF1 alpha subunit [Prunus persica]
          Length = 507

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 184/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + V+  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKVLNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAFLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               V+     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVVCVYVAIGQKASSVAQVVTALQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYREQHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   S +
Sbjct: 425 QSSPLSVE 432


>gi|167630292|ref|YP_001680791.1| flagellar protein export ATPase flii, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593032|gb|ABZ84780.1| flagellar protein export ATPase flii, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 433

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 157/442 (35%), Positives = 241/442 (54%), Gaps = 18/442 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DN 58
           MQK L+ +  +      + V   G +S +  +            LG+  +   ++     
Sbjct: 1   MQKYLQAIRTM------DPVRLNGKVSQVIGLVIQSDG--PSANLGEVCLVSTQSGKQRV 52

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
             +V+        + P+G    I  G  V   G    ++      GRV++ LG P+D   
Sbjct: 53  RSEVVGFREGKTLLMPLGEMGGIGPGSQVLATGDVLTVAVGEALLGRVLDGLGNPLDDGG 112

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        + +  P  + R+R+++    G++ ID       GQR+G+FAGSG+GKSTL
Sbjct: 113 PIATT-GDYPLTASPPNPLKRKRIQQPLPLGVKAIDGLLTCGRGQRLGIFAGSGVGKSTL 171

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I L+GERGREVREFI +D   + L +SVVVVATSD+  ++R     
Sbjct: 172 LGMIARNTTADINVIGLIGERGREVREFIEKDLGPEGLARSVVVVATSDQPALVRLKGAF 231

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F   G +V+L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER
Sbjct: 232 VATAIAEFFRDLGKDVMLMMDSVTRFAMAQREVGLAVGEPPATRGYTPSVFAMLPKLLER 291

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G IT + +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D L+S
Sbjct: 292 SGTSDK--GTITGLYTVLVDGDDMNEPIADAVRGILDGHIVLSRDLAAQNHYPAIDILSS 349

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  +  S + +   + L  ++  + E +D+  IG Y+ G +  +D ++ ++    +F
Sbjct: 350 VSRVMIELVSKEHRDAAAQLRSVLATYREAKDLIDIGAYQKGANPQIDYSLKKIDACREF 409

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L+Q   +      F E   +L+
Sbjct: 410 LRQDIFEAI---PFDETIGRLR 428


>gi|85713633|ref|ZP_01044623.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A]
 gi|85699537|gb|EAQ37404.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A]
          Length = 441

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 163/426 (38%), Positives = 255/426 (59%), Gaps = 8/426 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +  +  +   +      + +G  +V + G       +V+  N D   + P    
Sbjct: 14  VNIYGRVVGVRGLMVEIAGPIHAMSVGARIVIETGVGPAIPAEVVGFNGDNAVVMPFAGL 73

Query: 79  EEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G   +      ++ P+A W GRV+NA+G+PIDG   L +G   +   +  PPA +
Sbjct: 74  DGVRRGCRALIANASGQVRPAASWLGRVLNAMGEPIDGKGPLPQGPAPVPYRNSPPPAHS 133

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+RV +    G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I LVGE
Sbjct: 134 RKRVGEPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADISVIGLVGE 193

Query: 198 RGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV+EF++ D   + L +SVVVVATSDE  ++R+ A    + +AEYF  +G +V+ ++
Sbjct: 194 RGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEGQDVMCMM 253

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI  ++GE P  +GY  +VF+ELPRLLER GP    +G IT + +VLVD
Sbjct: 254 DSVTRFAMAQREIGLSTGEPPTTKGYTPTVFTELPRLLERAGPGSG-EGTITGIFTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+HN+P+AD+VR ILDGHIV+ R +AE GRYP ++ L SVSR   K+       +++  
Sbjct: 313 GDDHNEPVADAVRGILDGHIVMERVIAERGRYPAINILKSVSRTMPKSADPAFLPVITRA 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV----FQE 432
             ++  + +  ++  +G YR G +  +D+A+   P++ DFL+Q+  +++  +      Q+
Sbjct: 373 RQMMATYSDMEELIRLGAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTGIEEGYRRLQQ 432

Query: 433 ITKKLQ 438
           I K L+
Sbjct: 433 IVKTLE 438


>gi|301765492|ref|XP_002918165.1| PREDICTED: ATP synthase subunit alpha, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 553

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPVG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|294085409|ref|YP_003552169.1| ATP synthase F1 subunit alpha [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664984|gb|ADE40085.1| ATP synthase F1, alpha subunit [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 511

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 106/442 (23%), Positives = 178/442 (40%), Gaps = 29/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D   N      V + G + S+         L + V  G+ V  +   
Sbjct: 1   MDIRAAEISAILKDQIANFGSEAEVAEVGRVLSVGDGIARAHGLDE-VQAGEMVEFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  D V I   G    I  GD+V        +P      GRV++ALG PID
Sbjct: 57  SGVKGMALNLESDNVGIVIFGEDRSIREGDVVRRTASIVDTPTGHGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L     S  +  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLKDVKRSR-VEVKAPGIMPRQSVHEPMQTGLKAIDSLIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK------------VIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
           + +      +                  I   VG++   V + +           ++VV 
Sbjct: 176 TAIAIDAFINQKSVNEAAGKDDSKKLFCIYVAVGQKRSTVAQIVRSLEEQGALDYTIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP TA  + EYF   G + L++ D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYTACAMGEYFRDNGMHALVVYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G+   TA+  +     + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEKNGSGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +
Sbjct: 356 TELFYKGIRPAVNVGLSVSRVGSAAQIKAMKQVAGSIKLELAQYRE---MAAFAQFASDM 412

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D      + +   + + LKQ  
Sbjct: 413 DASTRALLARGARLTELLKQPQ 434


>gi|219673973|ref|YP_002456458.1| ATP synthase CF1 alpha subunit [Trifolium subterraneum]
 gi|193788942|gb|ACF20538.1| ATP synthase CF1 alpha subunit [Trifolium subterraneum]
          Length = 510

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KLIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLFIQEGSSVKATGRIAQIPVSEGYLGRVVNALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     V+     +G++   V + +           +++V  T++    L+ +AP T   
Sbjct: 186 NQQGQNVVCVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFVELE---AFAQFSSDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|197100035|ref|NP_001126846.1| ATP synthase subunit alpha, mitochondrial precursor [Pongo abelii]
 gi|75041057|sp|Q5R546|ATPA_PONAB RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|55732854|emb|CAH93120.1| hypothetical protein [Pongo abelii]
          Length = 553

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +        +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIS-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|146293669|ref|YP_001184093.1| flagellum-specific ATP synthase [Shewanella putrefaciens CN-32]
 gi|145565359|gb|ABP76294.1| flagellar protein export ATPase FliI [Shewanella putrefaciens
           CN-32]
 gi|319427068|gb|ADV55142.1| flagellar protein export ATPase FliI [Shewanella putrefaciens 200]
          Length = 445

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 157/443 (35%), Positives = 241/443 (54%), Gaps = 9/443 (2%)

Query: 1   MQKN----LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           MQ      L  L Q  +       V  G +  +  +    +       +G     +    
Sbjct: 1   MQNRQHQLLSKLHQYIDKVPPFRAVASGQLVRVVGLTLEASG--CRAPVGSLCSIETMAG 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
           D + +V+  + +++Y+ P+     +  G  V   G    +       GRV++  G P+DG
Sbjct: 59  DLVAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L + D      +     ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 119 LGAL-QTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFIE+ LG+    +SVV+ A +D SP++R  A
Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+
Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  
Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIE 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P + 
Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL+Q+  D  S    Q +  +L
Sbjct: 418 AFLRQTMRDAFSFADSQSMLAQL 440


>gi|194337686|ref|YP_002019480.1| ATP synthase F1, alpha subunit [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|226739921|sp|B4SGC7|ATPA_PELPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|194310163|gb|ACF44863.1| ATP synthase F1, alpha subunit [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 526

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 177/445 (39%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      AE Y        G +  +      V  LS+ V  G+ +       + +G
Sbjct: 14  LRKQLAGFESEAEVYD------VGTVLQVGDGIARVYGLSK-VAAGELLEFPN---NVMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G    +  GD V        I       GRVIN LG+PIDG  ++
Sbjct: 64  MALNLEEDNVGAVLFGESNLVKEGDTVKRTSILASIPVGEAMLGRVINPLGEPIDGKGTI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
               + + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 D-TQIRLPLERRAPGVIYRKSVHEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAVAI 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
               +        I   +G +G  V + +      D ++ + V+ AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVFCIYVAIGLKGSTVAQVVNTLEKYDAMEYTTVISATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              T+ EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGATLGEYFRDTGRHALVVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVARKMNDLPDALKSLVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNSGQRPAINVGISVSRVGGSAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKTTKAQLDRGARLVEILKQGQ 444


>gi|325264963|ref|ZP_08131690.1| ATP synthase F1, alpha subunit [Clostridium sp. D5]
 gi|324029653|gb|EGB90941.1| ATP synthase F1, alpha subunit [Clostridium sp. D5]
          Length = 503

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 102/430 (23%), Positives = 181/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + +   G +  +      VT L   V  G+ +   G      G  + 
Sbjct: 9   SQIKKQIETYTSQMEITDFGTVLEVGDGVARVTGLRHCVA-GELLEFSGG---TYGMAMN 64

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G    I  GD+V   G+   +       GRV+N LG+PIDG   + + D
Sbjct: 65  LEEKNVGAVIIGSDRGIKEGDIVRPTGKVAEVPVGEELLGRVVNPLGEPIDGKGPV-ETD 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S  P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 124 KTRPIESPAPGVLQRKSVHQPLQTGIKAIDAMIPIGKGQRELIIGDRQTGKTAIAIDTIL 183

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G+R   + + ++     +    +++V AT+ +   L+ +AP     
Sbjct: 184 NQKGKDVICIYVAIGQRKSTIAQLVKTLSDRDAMGYTIIVSATASDVAPLQYIAPYAGCA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 244 MAEEFMYAGKDVLIVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 303

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 304 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESELFFSGQRPAVNAGISVS 363

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  ++  ++ ++ E +       +   +D    + +    ++ + LK
Sbjct: 364 RVGGSAQIKAMKKVAGTIKLMLAQYRELK---GFSQFGSDIDKDTKERLENGMLLMEILK 420

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 421 QGQYQPVSVE 430


>gi|291561951|emb|CBL40759.1| ATP synthase F1 subcomplex alpha subunit [butyrate-producing
           bacterium SS3/4]
          Length = 500

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 177/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E YS  L V   G +  +      +  L +    G+ +   G   +  G V+ 
Sbjct: 10  SVIKEQIERYSTKLEVSDVGTVIQVADGITRIHGL-ENAMQGELLEFPG---EVYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    IS GD V   GR   +       GRV+NALG+PIDG   +   D
Sbjct: 66  LEEDNVGAVLLGDSSSISEGDTVKTTGRVVEVPVGDALTGRVVNALGQPIDGKGPIL-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I       + R+ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRKIERVAHGVIERKSVDTPLQTGIKAIDAMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++       +  + +VV+T+ +   L+ +AP +   
Sbjct: 185 NQKGQGVHCIYVAIGQKASTVATIVKTLEEFGAMDYTTLVVSTASDLAPLQYIAPYSGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +   G++VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEEWMENGEDVLVVYDDLSKHAAAYRTLSLLLKRPPGREAYPGDVFYLHSRLLERASRL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   +   G  P ++   SVS
Sbjct: 305 SDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+ + +   + ++ E   +     +   +D    + + Q   I + LK
Sbjct: 365 RVGGAAQIKAMKKIAAPIRVELAQYRE---LASFAQFGSELDASTKEQLAQGERIREVLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPQYQP 427


>gi|290490206|gb|ADD31510.1| ATP synthase CF1 alpha subunit protein [Oxalis latifolia]
          Length = 507

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + ++  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKILNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GR++NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAFLGRIVNALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|91777094|ref|YP_546850.1| ATP synthase F1, alpha subunit [Methylobacillus flagellatus KT]
 gi|118573482|sp|Q1GXM8|ATPA_METFK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91711081|gb|ABE51009.1| ATP synthase F1 subcomplex alpha subunit [Methylobacillus
           flagellatus KT]
          Length = 513

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   +++L +   +N          G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLSTSEISELIKSRLENFSTSAEARTQGTVISVTDGIVRIHGLS-NVMAGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NVYGLALNLERDSVGAVILGDYENISEGDTVKCTGRILEVPVGPELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTDKIEKVAPGVIARKSVSQPVQTGIKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +   L+
Sbjct: 176 TAVAVDAIINQKGQNMTCIYVAIGQKASTIANVVRKLEEHGAMEYTIVVAASASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETAAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D +  K + +  ++ + +KQ+     S
Sbjct: 413 LDEVTRKQLDRGRLVTELMKQAQYAPLS 440


>gi|153938181|ref|YP_001389517.1| F0F1 ATP synthase subunit alpha [Clostridium botulinum F str.
           Langeland]
 gi|166201663|sp|A7G9Q7|ATPA_CLOBL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|152934077|gb|ABS39575.1| ATP synthase F1, alpha subunit [Clostridium botulinum F str.
           Langeland]
 gi|295317617|gb|ADF97994.1| ATP synthase F1, alpha subunit [Clostridium botulinum F str.
           230613]
          Length = 504

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+++ N+  +  G I  I      V  L +    G+ +       D  G  + 
Sbjct: 10  SIIRQQIENFNTNIETIDSGTIIQIGDGIARVYGL-EDCMEGELIEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G++V    +   +       GRV+N+LG PIDG   +   +
Sbjct: 66  LEQDNVGCVLLGAEEGIKEGNVVKRTKKVVEVPVGEALVGRVVNSLGMPIDGKGPVLTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + ++    P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 -NRDVEVPAPGVIDRQSVKEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIAMDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   + D         ++VV +T+ +S  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNDLTKMGAMDYTIVVSSTASDSAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHKGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSRLLERSARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G++TA+  V     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SEKLGGGSLTALPIVETLAGDVTAYIPTNVISITDGQIFLESELFNAGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVAGTLRLELAQYRE---LAAFSQFGSDLDKESVKRLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|18860296|ref|NP_569614.1| ATP synthase CF1 alpha subunit [Psilotum nudum]
 gi|75305095|sp|Q8WI30|ATPA_PSINU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|18389449|dbj|BAB84201.1| ATP synthase subunit CF1 alpha [Psilotum nudum]
          Length = 508

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 104/430 (24%), Positives = 186/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y + + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 13  SIIRKQIEEYIQEVKVVNIGTVLQVGDGIARIYGLDE-VMAGELLEFEDG---TVGIALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 69  LESDNVGAVLMGDGLTIQEGGSVKATGKIAQIPVSNAYLGRVVNALAQPIDGKGQISASE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 129 SRL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 187

Query: 184 SDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     V  +   +G++   V + +  +        ++VV   +D    L+ +AP T   
Sbjct: 188 NQKGQNVTCVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAEMADSPATLQYLAPYTGAA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 248 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 308 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 368 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDRATQNQLARGQRLRELLK 424

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 425 QSQSAPLSVE 434


>gi|40538742|ref|NP_075581.1| ATP synthase subunit alpha, mitochondrial precursor [Rattus
           norvegicus]
 gi|83300587|sp|P15999|ATPA_RAT RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|38512279|gb|AAH61830.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit 1, cardiac muscle [Rattus norvegicus]
 gi|149029484|gb|EDL84698.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_e [Rattus norvegicus]
          Length = 553

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G   +   +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVG-SKIRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|145220431|ref|YP_001131140.1| F0F1 ATP synthase subunit alpha [Prosthecochloris vibrioformis DSM
           265]
 gi|189081309|sp|A4SGM9|ATPA_PROVI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145206595|gb|ABP37638.1| ATP synthase F1 subcomplex alpha subunit [Chlorobium
           phaeovibrioides DSM 265]
          Length = 526

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 174/445 (39%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      AE Y        G +  +      V  L +    G+ +       + +G
Sbjct: 14  LRKQLAGFESEAEVYD------VGTVLQVGDGIARVYGLLKAAA-GELLEFP---HNIMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V     G    +  GD V   G    I       GRVIN LG+PIDG  ++
Sbjct: 64  MVLNLEEDNVGAVMFGASNAVKEGDTVRRTGILASIPVGEAMLGRVINPLGEPIDGKGAI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +  + + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 -ETSIRLPLERRAPGVIYRKSVHEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAVAL 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G +G  V + +           + V+ AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVYCIYVAIGLKGSTVAQVVNTLEKHGAMEYTTVISATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGAALGEYFRDTGRHALVIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFFLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVAKKMNDLPEALKPMVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNSGQRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKTTKAQLDRGARLVEILKQGQ 444


>gi|325210915|ref|YP_004285989.1| ATP synthase CF1 alpha subunit [Gossypium thurberi]
 gi|290775777|gb|ADD62273.1| ATP synthase CF1 alpha subunit [Gossypium thurberi]
          Length = 507

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V      +   I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGYYYAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|294665982|ref|ZP_06731245.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604230|gb|EFF47618.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 442

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 168/425 (39%), Positives = 242/425 (56%), Gaps = 9/425 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +       GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E+   TG+R++D  T L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGEN--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL Q    LS+ 
Sbjct: 369 DHSQAAGQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSAY 428

Query: 428 DVFQE 432
           D   E
Sbjct: 429 DSTLE 433


>gi|302338080|ref|YP_003803286.1| flagellar protein export ATPase FliI [Spirochaeta smaragdinae DSM
           11293]
 gi|301635265|gb|ADK80692.1| flagellar protein export ATPase FliI [Spirochaeta smaragdinae DSM
           11293]
          Length = 453

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 159/429 (37%), Positives = 243/429 (56%), Gaps = 10/429 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    +    + E      + + G +  +  +   V      V +G+         + + 
Sbjct: 1   MTALFQKYTDVLERMDP--IKEIGTVREVKGLL--VESHGPQVVVGELCQILTSGGEPVW 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+      V + P    + I  G  V   G    +  S    GRV++A+G+PIDG   
Sbjct: 57  AEVVGFRDRTVQLMPFESMDGIEPGSQVVAMGETLSVPVSEKMLGRVLDAMGRPIDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +G  + S+  ++  P  + R+ +++   TG+R ID  TP+  GQRIG+F+GSG+GKSTLL
Sbjct: 117 VGGAE-SVSTVNTPPNVLTRKPIKRQMVTGVRAIDTMTPIGKGQRIGIFSGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREV+EFI  D   + L++S++VV+T D +P+ R      
Sbjct: 176 GMIARNTSADINVIALIGERGREVQEFIEYDLGPEGLERSILVVSTGDTAPLSRLRGAFV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAE+F  KG +V+L+ DS+TRFA + REI    GE P  RGY  SVFS LP+LLER 
Sbjct: 236 ATTIAEHFRDKGADVMLLFDSVTRFARAQREIGLAVGEPPATRGYTPSVFSTLPKLLERC 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E  +G IT   ++LV+GD+ ++P+AD+VR ILDGHIVL+R LA+  RYP +D LAS+
Sbjct: 296 GTGE--RGTITGFYTILVEGDDMDEPVADAVRGILDGHIVLSRKLAQAYRYPAIDVLASL 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL  K  S   +K    L  L+  + +  D+  +G Y  G +  +D+A+ ++  I +FL
Sbjct: 354 SRLGTKITSPLVQKASGKLRSLLAVYTDAEDLINVGAYAEGSNSAIDEAIEKIDAIREFL 413

Query: 418 KQSPSDLSS 426
            Q  ++ + 
Sbjct: 414 GQGITEAAP 422


>gi|269792943|ref|YP_003317847.1| ATPase, FliI/YscN family [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100578|gb|ACZ19565.1| ATPase, FliI/YscN family [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 441

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 163/426 (38%), Positives = 247/426 (57%), Gaps = 11/426 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICP 74
             L+   G +  +  +   +      V +GD      + + +    +V+    D V + P
Sbjct: 17  TELIRLNGRVVQVVGLV--IESQGPDVQVGDLCEISFRNRRNPLKAEVVGFRSDRVLLMP 74

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G   +I  G  V   G    +       GR+++ LG PID    +G  +    + +  P
Sbjct: 75  LGDLNDIGPGCDVAALGPTLGVHVGEDLLGRILDGLGNPIDDLGPVGASEF-YPLYAPPP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + RQ +++    G+RVID    L  GQR+G+FAGSG+GKS LL M AR+   D  +I+
Sbjct: 134 HPLKRQMIDRPLSVGVRVIDGLLTLGQGQRVGIFAGSGVGKSVLLGMMARNTEADVNVIA 193

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           LVGERGREVREF+  D   + LK+SVVVVATSD+ P++R  A LTA  +AEYF  +G NV
Sbjct: 194 LVGERGREVREFVERDLGPEGLKRSVVVVATSDQPPLVRLKASLTATAVAEYFRDQGANV 253

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR A + R++    GE P  +GY  SVF+ LPRLLER G  +  +G+ITA+ +
Sbjct: 254 LLMMDSVTRVAMAQRDVGLAIGEPPATKGYTPSVFAFLPRLLERSGAGD--RGSITAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+P+AD+VR ILDGHIVL+RSLA +  YP V+   SVSR+     S +  + 
Sbjct: 312 VLVEGDDMNEPVADTVRGILDGHIVLSRSLAAKNHYPSVEVGRSVSRVMPHIVSREHLES 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              +  L+  +EE +D+  IG Y+ G +  +D A+  +  + +FL+Q   + SS D  + 
Sbjct: 372 AGRVRELLAVYEEAQDLVNIGAYKAGSNPRIDWALANLEDVRNFLRQGMHERSSFD--ET 429

Query: 433 ITKKLQ 438
           +++ L+
Sbjct: 430 VSRLLE 435


>gi|81176509|ref|YP_398393.1| atp1 [Triticum aestivum]
 gi|13725|emb|CAA34060.1| unnamed protein product [Triticum aestivum]
 gi|1405781|emb|CAA56641.1| ATP synthase subunit alpha [Triticum turgidum subsp. durum x
           Triticosecale sp.]
 gi|1430900|emb|CAA67492.1| atpA [Secale cereale]
 gi|78675233|dbj|BAE47658.1| atp1 [Triticum aestivum]
 gi|169649046|gb|ACA62607.1| apt1 [Triticum aestivum]
 gi|291498595|gb|ADE08069.1| apt1-1 [Triticum aestivum]
 gi|291498596|gb|ADE08070.1| apt1-2 [Triticum aestivum]
          Length = 509

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 175/442 (39%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G+ TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 TQALLNRGARLTEVPKQPQYEP 438


>gi|325662853|ref|ZP_08151422.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086569|ref|ZP_08335647.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470905|gb|EGC74134.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330410402|gb|EGG89834.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 500

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 102/435 (23%), Positives = 179/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K       V   G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLKPEEISSVIKEQIKRYASELEVSDVGTVIQVADGIARIHGL-ENAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G    I+ GD V   GR   +    C  GRV+NALG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGAVLLGDNRNINEGDTVKTTGRVVEVPVGDCMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +       +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQATSFR-QIERVASGVISRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++ +        + VV +T+ E   L+
Sbjct: 176 TAIAVDTIINQKGQGVKCIYVAIGQKASTVANIVQTFEEHGAMDYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +   G++VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMENGEDVLVVYDDLSKHATAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARLSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETEMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++P  SVSR+   A     KK+   +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AINPGISVSRVGGSAQIKAMKKIAGPIRIDLAQYRE---LASFAQFGSELDADTTERLAQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ     
Sbjct: 413 GARIKEMLKQPQYQP 427


>gi|327248646|dbj|BAK09231.1| ATP synthase alpha subunit 1 [Mesocricetus auratus]
          Length = 553

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 181/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G   +   +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKIRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNEGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNESFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|169142786|ref|YP_001687211.1| ATP synthase CF1 alpha subunit [Aneura mirabilis]
 gi|190358230|sp|B0YPM5|ATPA_ANEMR RecName: Full=ATP synthase subunit alpha, plastid; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|153973812|gb|ABS54472.1| ATP synthase CF1 alpha subunit [Aneura mirabilis]
          Length = 507

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 7   TLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            +    E Y++ + VV  G +  +      +  L + V  G+ V  +      +G     
Sbjct: 12  VIRTRIEQYNQEVKVVNTGTVPQVGDGIARIYGLDK-VMAGELVKFEDG---TVGIAPNS 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   + 
Sbjct: 68  ESDNVGVVLMGDGLTIQEGSSVKATGQIAQIPVSEAYLGRVVNALAQPIDGKGKIPASES 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +
Sbjct: 128 RL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILN 186

Query: 185 DCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
                   I   +G++   V + +  +      K ++VV   ++    L+ +AP T   +
Sbjct: 187 QKGQDVICIYVAIGQKASSVAQVVNTFEERGALKYTIVVTENANSPATLQYLAPYTGAAL 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +  + L++ D +++ A + R+++      P    YP  VF    RLLER   S 
Sbjct: 247 AEYFMYRKQHTLIVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSN 306

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +  +G++TA   +     + +  I  +V SI DG I L+  L   G  P ++   SVSR
Sbjct: 307 SQLGEGSMTAPPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++   L   + +F E         +   +D      + +   + + LKQ
Sbjct: 367 VGSAAQIRAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQ 423

Query: 420 SPS 422
           S S
Sbjct: 424 SQS 426


>gi|56697996|ref|YP_168367.1| F0F1 ATP synthase subunit alpha [Ruegeria pomeroyi DSS-3]
 gi|81558337|sp|Q5LNN9|ATPA_SILPO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56679733|gb|AAV96399.1| ATP synthase F1, alpha subunit [Ruegeria pomeroyi DSS-3]
          Length = 512

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 184/447 (41%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG PID
Sbjct: 59  --IMGMALNLENDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPQGDELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L      K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLRGVADVKAPGIIPRKSVHEPMATGLKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
                 T+L+  + +D            +   +G++   V + ++    +     S+VV 
Sbjct: 176 TAIALDTILNQKSYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEENGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|301168589|emb|CBW28179.1| ATP synthase F1 sector alpha subunit [Bacteriovorax marinus SJ]
          Length = 498

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 102/429 (23%), Positives = 180/429 (41%), Gaps = 19/429 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N E +  + +    N      V + G + ++      V  L + V  G+ V      +  
Sbjct: 2   NPEEITSIIKSRIANFETKLQVDEVGTVLTVGDGVARVFGL-KNVMAGELVEF---GTGT 57

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G V+ +  + V +  +G   +I  G  V    +   +       GRV+NA+G+PIDG  
Sbjct: 58  KGMVLNLEANNVGVAILGNDNDIKEGSTVKRTEKIVEVPVGDALLGRVVNAIGEPIDGQG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D   +I  K P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 118 EIN-SDNYGKIEIKAPGIIARKPVHEPLQTGIKAIDSMIPIGRGQRELIIGDRKTGKTAV 176

Query: 178 LSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +        I   +G++   VR+  +          +++V AT+ ++  L+ +A
Sbjct: 177 AIDTIINQKGKDVVCIYVAIGQKNSTVRQVQQKLKEAGALDYTIIVSATASDTAPLQYLA 236

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T  T+ EY+   G + +++ D +T+ A + R+++      P    +P  VF    RLL
Sbjct: 237 PYTGCTMGEYYRDNGKHAVIVYDDLTKQAQAYRQMSLLLRRPPGREAFPGDVFYLHSRLL 296

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+
Sbjct: 297 ERAAKLSDELGAGSLTALPVIETQEGDVSAYIPTNVISITDGQIFLESDLFNSGVRPAVN 356

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  +L   +  F E   +     +   +D      + +   
Sbjct: 357 VGLSVSRVGGSAQIKAMKKVAGTLRLDLASFRE---LAAFAAFGSDLDAATQAQLSKGER 413

Query: 413 IYDFLKQSP 421
           + + LKQ  
Sbjct: 414 LVELLKQGQ 422


>gi|164422240|gb|ABY55213.1| Atp1 [Bambusa oldhamii]
          Length = 509

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 175/442 (39%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G+ TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 TQALLNRGARLTEVPKQPQYEP 438


>gi|74139457|dbj|BAE40868.1| unnamed protein product [Mus musculus]
          Length = 553

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVACRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|255099418|ref|ZP_05328395.1| flagellum-specific ATP synthase [Clostridium difficile QCD-63q42]
          Length = 439

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 169/441 (38%), Positives = 254/441 (57%), Gaps = 14/441 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           +  + + + +  E+    L +  G +  I  +   V  +  +V  G+  V   + N    
Sbjct: 6   ISIDFDKINKKIENLE--LTISEGRVKKIIGLTVEVEGIKAFV--GELCVIYNQVNKPVN 61

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+      V +  +G    I+ G  V   G    +  S    G+V++ LG PID  D+
Sbjct: 62  CEVVGFKDKEVILMALGELTLIAPGCKVISKGIPLSVMCSDNLLGKVLDGLGNPIDNSDA 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        + ++ P  M R+++    +TG+R ID FT    GQRIG+FAGSG+GKST L
Sbjct: 122 VLGD--RYNLNNEPPDPMKRKKIRNIMETGVRAIDAFTTCGEGQRIGIFAGSGVGKSTTL 179

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREV +FI+ D   + +KKSVVV ATSD++P++R    LT
Sbjct: 180 GMIARNAKADVNVIALIGERGREVLDFIDKDLGEEGMKKSVVVYATSDKAPLVRLKGALT 239

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LP+L+ER 
Sbjct: 240 ATAIAEYFRDQGKKVILMMDSVTRFAMAQREVGVAIGEPPAQKGYTPSVFAILPKLMERT 299

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA  +VLVDGD+ N+PIAD+ R ILDGHIVL+R LA +  YP +D L S+
Sbjct: 300 GTSDK--GSITAFYTVLVDGDDFNEPIADTTRGILDGHIVLSRDLANKNHYPSIDVLNSL 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL ++  S ++ K+ S    ++  + E  D+  IG Y  G +  +D+A++    I +FL
Sbjct: 358 SRLMNEIASKEDIKIASFARDMLAEYREAEDLINIGAYASGTNKKIDEAIYYHEHIINFL 417

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           KQ  ++ SS   F E    L+
Sbjct: 418 KQGINEKSS---FNETISSLR 435


>gi|217968670|ref|YP_002353904.1| F0F1 ATP synthase subunit alpha [Thauera sp. MZ1T]
 gi|217505997|gb|ACK53008.1| ATP synthase F1, alpha subunit [Thauera sp. MZ1T]
          Length = 514

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL         G + S+T     V  L+  V  G+ +   G  
Sbjct: 3   MQLNPSEISDLIKSRIQNLQLAATSRNEGTVVSVTDGITRVHGLTD-VMQGEMLEFPG-- 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 60  -NTFGMALNLERDSVGAVVLGEYEHITEGDTVKATGRILEVPVGPELIGRVVNALGQPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + RQ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GKGPIN-AKLTDKIEKVAPGVIARQSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   V   +     +     ++VV AT+ ES  ++
Sbjct: 178 TAVAVDAIINQKGQDMYCVYVAIGQKASTVANVVRKLEENGAMEYTIVVAATASESAAMQ 237

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G + L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 238 YLAAYAGCTMGEYFRDRGMDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 297

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 298 RLLERAARVNADYVEKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 357

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 358 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYREL---AAFAQFASD 414

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ+     S
Sbjct: 415 LDDATRKQLERGRRVTELMKQAQYSPMS 442


>gi|118443884|ref|YP_878998.1| F0F1 ATP synthase subunit alpha [Clostridium novyi NT]
 gi|158512414|sp|A0Q2Z6|ATPA_CLONN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118134340|gb|ABK61384.1| ATP synthase F1, alpha subunit [Clostridium novyi NT]
          Length = 502

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 186/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   +  V  G I  I      V  + +    G+ +       D  G  + 
Sbjct: 10  SIIKKQIESYEHKIQTVDSGTIIQIGDGIARVYGI-EDCMEGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  GD+V   GR   +       GRV+NALG+P+DG   + K  
Sbjct: 66  LEQDNVGCVLLGPEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLDGKGPI-KCT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I  + P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK+ +   ++ 
Sbjct: 125 QTRAIELEAPGVIERKSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGKTAIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D   K I   +G++   V   +           ++VV +T+ +S  L+ ++P +  +
Sbjct: 185 NQKDKNVKCIYVAIGQKQSTVAHIVNTLTEMGAMDYTIVVSSTASDSAPLQFLSPYSGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG++VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MAEYFMLKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SDKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQKPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVSGTLRLELAQYRE---LAAFAQFGSDLDNSSKERLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QDQ 424


>gi|115278526|ref|YP_762326.1| ATPase subunit 1 [Sorghum bicolor]
 gi|114309647|gb|ABI60864.1| ATPase subunit 1 [Sorghum bicolor]
          Length = 513

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 176/442 (39%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 TQALLNRGARLTEVPKQPQYEP 438


>gi|167747406|ref|ZP_02419533.1| hypothetical protein ANACAC_02126 [Anaerostipes caccae DSM 14662]
 gi|317471137|ref|ZP_07930508.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
 gi|167652768|gb|EDR96897.1| hypothetical protein ANACAC_02126 [Anaerostipes caccae DSM 14662]
 gi|316901352|gb|EFV23295.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
          Length = 503

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 100/430 (23%), Positives = 176/430 (40%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + YS  L     G +  +      +  L +    G+ +   G   +  G V+ 
Sbjct: 10  SVIKEQIKQYSTKLETSDIGTVIQVADGIARIHGLDE-AMQGELLEFPG---EVYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + IS GD+V   GR   +       GRV+N+LG+PIDG   + + +
Sbjct: 66  LEEDNVGAVLLGDQKNISEGDVVKTTGRVVEVPVGDAMTGRVVNSLGQPIDGKGPI-ETE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYRPIERVASGVISRKSVDTPLQTGIKAIDAMVPIGRGQRELIIGDRQTGKTAIAVDTII 184

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++ +        + VV +T+ E   L+ +AP     
Sbjct: 185 NQKGQGVHCIYVAIGQKSSTVANIVKTFEEYGAMDYTTVVASTASELAPLQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +   G++VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEEWMENGEDVLVIYDDLSKHATAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   +   G  P ++   SVS
Sbjct: 305 SDELGGGSLTALPLIETQAGDVSAYIPTNVISITDGQIYLETEMFNAGFRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   +   + ++ E         +   +D    + + Q   I + LK
Sbjct: 365 RVGGAAQIKAMKKIAGPIRTDLAQYREL---AAFAQFGSELDDDTKERLAQGERIKEVLK 421

Query: 419 QSPSDLSSED 428
           Q        +
Sbjct: 422 QPQYQPLPVE 431


>gi|11467021|ref|NP_041928.1| ATP synthase CF1 alpha subunit [Euglena gracilis]
 gi|231592|sp|P30392|ATPA_EUGGR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|14382|emb|CAA77932.1| ATP synthase CF1 subunit alpha [Euglena gracilis]
 gi|415771|emb|CAA50115.1| ATP synthase, CFI-alpha subunit [Euglena gracilis]
          Length = 506

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 98/426 (23%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  + Y + L +V  G +  +      +  L + V  G+ V     +   +G  + + 
Sbjct: 13  IRQQVKKYRQELKIVNVGTVLQVGDGIARIYGLEK-VMAGELVEF---DEGTIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G    +  G  V   G+  +I     + GRV++AL +PIDG   +      
Sbjct: 69  ADNVGAVLMGEATNLKEGASVKTTGKIAQIPVGRGFLGRVVDALARPIDGKGDIASFTTR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIVSRRSVHEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 --CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           +++V   +D S  L+ +AP T   +A
Sbjct: 188 KGQGVICVYVAIGQKASSVSQIVTTLEKRGAMEYTIIVAENADSSATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYNGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  +G++TA+  V     + +  I  +V SI DG + L+  +   G  P ++   SVSR+
Sbjct: 308 ELGQGSMTALPIVETQAGDVSAYIPTNVISITDGQVFLSADIFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGARLRELLKQP 424

Query: 421 PSDLSS 426
            +   S
Sbjct: 425 QASPLS 430


>gi|316935199|ref|YP_004110181.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris DX-1]
 gi|315602913|gb|ADU45448.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris DX-1]
          Length = 441

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 168/436 (38%), Positives = 253/436 (58%), Gaps = 7/436 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR 64
           + LA+   D     V   G +  +  +   +      + +G  +V + G N     +VI 
Sbjct: 2   KALAEQIGDIDS--VNTYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGANRAIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              +   + P    E +  G   +      ++ PS  W GRV+NALG+PIDG   L +G 
Sbjct: 60  FTGNNAIVMPFAGLEGVRRGCRAIIANAAAQVRPSPHWLGRVVNALGEPIDGKGPLVQGP 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M   ++ PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMPFRNQPPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +      +I L+GERGREV+EF++ D   + L +SVVVVATSDE  ++R+ A    + IA
Sbjct: 180 NVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAIA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF     +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP   
Sbjct: 240 EYFRDNDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLG 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR   
Sbjct: 300 -EGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRAIAERGRYPAINVLKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K+       L+     ++  + +  ++  +G YRPG    +D+AV     + DFL+Q   
Sbjct: 359 KSADPVYLPLIKRARQIMATYADMEELIRLGAYRPGSSAEVDEAVRLHEPLEDFLRQGKD 418

Query: 423 DLSS-EDVFQEITKKL 437
           + +S +  + ++ + L
Sbjct: 419 EATSLQSGYAQLEQIL 434


>gi|57115581|gb|AAW33097.1| F1-ATPase alpha subunit [Ficus pumila]
          Length = 424

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVKILSEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 405


>gi|328954123|ref|YP_004371457.1| ATP synthase subunit alpha [Desulfobacca acetoxidans DSM 11109]
 gi|328454447|gb|AEB10276.1| ATP synthase subunit alpha [Desulfobacca acetoxidans DSM 11109]
          Length = 506

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 104/435 (23%), Positives = 187/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++Q+     K+      V + G + S+      V+ + + + + + +   G  
Sbjct: 1   MEIRAEEISQIIRTQIKDYEKKVEVAETGTVLSVGDGIARVSGVEKCMAM-ELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V    +G    I  GD+V   GR   +       GRV++ +G PID
Sbjct: 59  --IFGIALNLEEDNVGCAILGEDIHIKEGDMVKRTGRIAEVPVGEACLGRVLDPVGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  K P  + RQ V +   TG + ID  TP+  GQR  +     IGK
Sbjct: 117 GKGPVEAKEYRR-IELKAPGVIERQPVNEPMYTGYKAIDAMTPVGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + L      +  D     I   +G++   V + ++     D +K ++V+ AT+ E   L+
Sbjct: 176 TALCVDAIINQKDSGVVCIYVAIGQKKSTVAQVVDALERNDAMKHTIVISATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EY+   G + L+I D +++ A + R+I+      P    +P  +F    
Sbjct: 236 YVSAFAGCTMGEYYRDSGRHALIIYDDLSKQATAYRQISLLLRRPPGREAFPGDIFYNHS 295

Query: 292 RLLERIGPS--EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      EK  G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERAAKLNIEKGGGSLTALPIIETQQGDVSAYIPTNVISITDGQVYLEPALFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  SL   + ++ E   +     +   +D      +++
Sbjct: 356 AINVGLSVSRVGGAAQVKAMKQVAGSLRLDLAQYRE---LAAFAQFGSELDKATQSQLNR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ   D 
Sbjct: 413 GIRLVEILKQPQYDP 427


>gi|317154801|ref|YP_004122849.1| ATP synthase F1 subunit alpha [Desulfovibrio aespoeensis Aspo-2]
 gi|316945052|gb|ADU64103.1| ATP synthase F1, alpha subunit [Desulfovibrio aespoeensis Aspo-2]
          Length = 502

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 100/437 (22%), Positives = 186/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ +D  ++   +      G +  +      V  + Q V   + +   G  
Sbjct: 1   MQIKAEEISKIIQDQIQDYESRVEMSETGTVLYVGDGIARVHGV-QNVMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    +  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --LMGMVLNLEEDNVGVALLGEDRGVKEGDPVKRTGKIYSVPVGPALAGRVVNPLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  +  K P  + R+ V +   TG++ ID  TP+  GQR  V      GK
Sbjct: 117 GLGPIDTTE-TRPVEMKAPGIIARKSVHEPCYTGLKAIDAMTPVGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+           +G++   V    E          + ++ AT+ E   L+
Sbjct: 176 TAVCVDAILAQKTTDVHCFYVAIGQKKASVALVAEILRQHGAMEYTTIISATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A  T  T+AEY+  KG++ L+  D +++ A + R+++      P    YP  VF    
Sbjct: 236 FIAAYTGATMAEYYRDKGEHALICYDDLSKQATAYRQMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG I L  +L   G  P
Sbjct: 296 RLLERSCKVNDSLGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIYLEPNLFLAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D    + +++
Sbjct: 356 AINVGLSVSRVGGSAQIKAMKQVAGTLRLDLAQYRE---LAAFASFGSDLDKATQQKLNR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      +
Sbjct: 413 GARMVEVLKQPQYKPQT 429


>gi|203055|gb|AAA40784.1| ATP synthase alpha subunit precursor (EC 3.6.1.3) [Rattus
           norvegicus]
          Length = 543

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 60  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 115

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G   +   +  K P  + R  
Sbjct: 116 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVG-SKIRRRVGLKAPGIIPRIS 174

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 175 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 234

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 235 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 294

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 295 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 355 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 414

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 415 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 465


>gi|160914780|ref|ZP_02076994.1| hypothetical protein EUBDOL_00787 [Eubacterium dolichum DSM 3991]
 gi|158433320|gb|EDP11609.1| hypothetical protein EUBDOL_00787 [Eubacterium dolichum DSM 3991]
          Length = 518

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 180/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +    Y   + V + G + +I      V  L +    G+ ++      D  G V+ 
Sbjct: 22  KLLKEQIRRYDDEMEVDETGTVITIGDGIALVYGL-RNAMAGELLLFP---HDVYGMVLN 77

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G    I  GD V   G+   +       GRV+NALG+ IDG +++   D
Sbjct: 78  LEEEHVGAVLMGNDTGIKEGDEVKRTGKIVEVPVGDMMLGRVVNALGQAIDGGEAIV-SD 136

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               +    P  M R+ V +   TG++VID   P+  GQR  +      GK+ +   ++ 
Sbjct: 137 KFRPVERVAPGVMTRKSVHQPLMTGLKVIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 196

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D   K I   +G++   V + +E          + +V +T+ ++  L+ +AP     
Sbjct: 197 NQKDKNVKCIYVAIGQKASTVAQIVEKLRSHGAMEYTTIVSSTASDAAPLQYIAPYAGCA 256

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +   GD+VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 257 IGEEWMENGDDVLIVYDDLSKHAVAYRTMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 316

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     +    I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 317 NDELGGGSLTALPIIETQAGDIAAYIPTNVISITDGQIFLQTELFNSGVRPAVDSGLSVS 376

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  SL   + ++ E +       +   +D    + +     +   L 
Sbjct: 377 RVGSAAQIKAMKQVSGSLKLELAQYREMQ---AFAKFGSDLDAATSETLAHGERLTRLLI 433

Query: 419 QSPSDLSS 426
           Q+  D  S
Sbjct: 434 QNQYDPMS 441


>gi|89280711|ref|YP_514682.1| ATP synthase F0 subunit 1 [Oryza sativa Indica Group]
 gi|289065052|ref|YP_003433863.1| ATP synthase F0 subunit 1 [Oryza rufipogon]
 gi|13959|emb|CAA35787.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|74100078|gb|AAZ99242.1| ATP synthase F0 subunit 1 [Oryza sativa Indica Group]
 gi|74100133|gb|AAZ99296.1| ATP synthase F0 subunit 1 [Oryza sativa Japonica Group]
 gi|74100187|gb|AAZ99349.1| ATP synthase F0 subunit 1 [Oryza sativa Japonica Group]
 gi|285026134|dbj|BAI67967.1| ATP synthase F0 subunit 1 [Oryza rufipogon]
 gi|285026184|dbj|BAI68016.1| ATP synthase F0 subunit 1 [Oryza sativa Indica Group]
 gi|285026197|dbj|BAI68029.1| ATP synthase F0 subunit 1 [Oryza sativa Indica Group]
          Length = 509

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 176/442 (39%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 TQALLNRGARLTEVPKQPQYEP 438


>gi|222084080|ref|YP_002519533.1| ATP synthase CF1 alpha chain [Keteleeria davidiana]
 gi|220983632|dbj|BAH11398.1| ATP synthase CF1 alpha chain [Keteleeria davidiana]
          Length = 507

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 179/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ +         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELLEF---GDGTIGLALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA- 182
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIP 185

Query: 183 -RSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +  +        ++VV  T+D S  L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSSATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSP 421
           QS 
Sbjct: 423 QSQ 425


>gi|153007334|ref|YP_001381659.1| F0F1 ATP synthase subunit alpha [Anaeromyxobacter sp. Fw109-5]
 gi|166201650|sp|A7HIX9|ATPA_ANADF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|152030907|gb|ABS28675.1| ATP synthase F1, alpha subunit [Anaeromyxobacter sp. Fw109-5]
          Length = 512

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 101/421 (23%), Positives = 182/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  +DY K + V + G + S       +  L+     G+ +          G V+ + 
Sbjct: 12  IREQIKDYGKKVDVAETGTVLSQADGVARIYGLAGAAA-GELLEFP---HGTRGLVLNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G  E I  GD V   G+   ++      GRV++ LG PIDG   +     +
Sbjct: 68  EDNVGAAIMGAFEHIREGDPVKRTGKIAEVAVGEELLGRVVDGLGSPIDGRGPVN-AKHT 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
            +I  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +      ++
Sbjct: 127 RKIEIKAPGIVQRKSVHEPMQTGLKAIDALVPIGRGQRELILGDRQTGKTAVAIDTILNN 186

Query: 186 CFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             +        VG++   V   +E          + V+ A + +   ++ +AP T VT+A
Sbjct: 187 KGNNLYCFYVAVGQKQSTVARVVEILKQHGAMEYTTVIAANASDPAPMQYLAPYTGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER     +
Sbjct: 247 EYFRDTGRHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSE 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G++TA+  +     + +  I  +V SI DG I L  +L  +G  P ++   SVSR+
Sbjct: 307 KEGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESNLFYQGVRPAINVGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  SL   + ++ E   +     +   +D    + + +   + + LKQ 
Sbjct: 367 GGSAQIKAMKQVAGSLKLELAQYRE---LAAFAQFGSDLDKATQETLARGERLVELLKQG 423

Query: 421 P 421
            
Sbjct: 424 Q 424


>gi|3132304|dbj|BAA28167.1| Cl--pumping ATPase a subunit [Acetabularia acetabulum]
          Length = 502

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 105/436 (24%), Positives = 186/436 (42%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y++ + +V  G +  +      +  L + V  G+ +     +   +G  + 
Sbjct: 11  SIIRQQIEQYNQEVKIVNVGTVFQVGDGIARIYGLEK-VMAGELLEF---DDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GRV+N+L +PIDG   +   +
Sbjct: 67  LETKNVGAVLMGEGLAVQEGSSVRATGKIAQIPVGDEYLGRVVNSLARPIDGKGEINTTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ + +    
Sbjct: 127 TRL-IESAAPGIISRKSVHEPLQTGLVAVDAMIPIGRGQRELIIGDRQTGKTAIATDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V AT+D    L+ +AP T  +
Sbjct: 186 NQKGKGVICVYVAIGQKASSIAQVVNTLQERGAMDYTIIVAATADTPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG + L I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKHTLAIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 NDELGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKKVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLRELLK 422

Query: 419 QSP-SDLSSEDVFQEI 433
           Q   S LS ED    I
Sbjct: 423 QPQASPLSLEDQVATI 438


>gi|34763444|ref|ZP_00144391.1| ATP synthase alpha chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742366|ref|ZP_04572847.1| ATP synthase subunit alpha [Fusobacterium sp. 4_1_13]
 gi|256845694|ref|ZP_05551152.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_36A2]
 gi|294785059|ref|ZP_06750347.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_27]
 gi|27886885|gb|EAA24010.1| ATP synthase alpha chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229430014|gb|EEO40226.1| ATP synthase subunit alpha [Fusobacterium sp. 4_1_13]
 gi|256719253|gb|EEU32808.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_36A2]
 gi|294486773|gb|EFG34135.1| ATP synthase F1, alpha subunit [Fusobacterium sp. 3_1_27]
          Length = 500

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 181/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K+L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKSLEIKTSGTVLEVGDGIARIFGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRVINALG PIDG   +   D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGENLLGRVINALGDPIDGKGEI-HAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          +++V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQDVKCIYVAIGQKRSTVAQIYKKLSDLGCMDYTIIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASRVKLELAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|229917037|ref|YP_002885683.1| ATP synthase F1, subunit alpha [Exiguobacterium sp. AT1b]
 gi|259585428|sp|C4KYS5|ATPA_EXISA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|229468466|gb|ACQ70238.1| ATP synthase F1, alpha subunit [Exiguobacterium sp. AT1b]
          Length = 502

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 180/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L ++   +      V + G +  +         L   V  G+ V      
Sbjct: 1   MTIKAEEISALLKERIASYGSEIEVSETGTVIQVGDGIARAHGL-DNVMAGELVEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +    V I  +G  + I  GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --VMGLAQNLEEGNVGIIILGDYKGIKEGDSVKRTGRIMEVPVGEALLGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I  K    M R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GLGPIV-TDTYNPIERKAYGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +++      +   +    I   +G++   VR  +E    +     ++VV A++ +   L 
Sbjct: 176 TSVAIDTIINQKEENMICIYVAIGQKESTVRGVVETLRQNGALDYTIVVSASASQPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V++ EYF  +G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPFAGVSMGEYFMDRGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNDELGGGSLTALPFIETQASDISAYIPTNVISITDGQIFLQSDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E         +   +D      +++
Sbjct: 356 AINAGLSVSRVGGSAQVKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDKATQSKLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
                + LKQ  +   S D
Sbjct: 413 GQRTVEVLKQDLNAPLSVD 431


>gi|159024047|gb|ABW87275.1| HrcN [Xanthomonas fuscans subsp. fuscans]
          Length = 442

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 168/425 (39%), Positives = 242/425 (56%), Gaps = 9/425 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +       GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E+   TG+R++D  T L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGEN--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL Q    LS+ 
Sbjct: 369 DHSQAARQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSAY 428

Query: 428 DVFQE 432
           D   E
Sbjct: 429 DSTLE 433


>gi|19703702|ref|NP_603264.1| F0F1 ATP synthase subunit alpha [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|81590911|sp|Q8RGE0|ATPA_FUSNN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|19713826|gb|AAL94563.1| ATP synthase alpha chain, sodium ion specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 500

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 181/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K+L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKSLEIKTSGTVLEVGDGIARIFGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRVINALG PIDG   +   D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGEDLLGRVINALGDPIDGKGEI-HVD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          +++V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQDVKCIYVAIGQKRSTVAQIYKKLSDLGCMDYTIIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|45383566|ref|NP_989617.1| ATP synthase subunit alpha, mitochondrial [Gallus gallus]
 gi|17225596|gb|AAL37491.1| ATP synthase alpha subunit [Gallus gallus]
          Length = 553

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 177/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V          G  + +  D V +   G    I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---FFGLKGMSLNLEPDNVGVVVFGNDRLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV+ ALG PIDG   +        +  K P  + R  
Sbjct: 126 KEGDVVKRTGAIVDVPVGEELLGRVVVALGNPIDGKGPI-TSKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+ ++     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPAIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|258511374|ref|YP_003184808.1| ATPase, FliI/YscN family [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478100|gb|ACV58419.1| ATPase, FliI/YscN family [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 441

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 178/440 (40%), Positives = 255/440 (57%), Gaps = 10/440 (2%)

Query: 1   MQKNLETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M ++   +A+   +  + +LV + G +  +      V        LG+        S+ L
Sbjct: 1   MARDPSWVAEAIREVERRHLVRRAGRVMRVIGHMLEVAG--PTASLGELCALGRDASEGL 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G+VI  +   +Y+ P+G   E+S G  V    R FRI       GRV+N LG+PID    
Sbjct: 59  GEVIGFHEGRLYVVPLGPLPEVSPGTPVRFLERQFRIRCGPGLVGRVLNGLGEPIDDRGP 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L    +   + +     + R R+   + TG+R ID    +  GQR+G+FAGSG+GKSTLL
Sbjct: 119 LEGPLVWRTVDAPAISPLRRGRISSPYATGVRAIDALLTIGRGQRVGLFAGSGVGKSTLL 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           SM AR    D  +I+LVGERGREVREF+ +D   + +++SVV+VATSDES  +R  A   
Sbjct: 179 SMMARGGRADVHVIALVGERGREVREFLEDDLGEEGMRRSVVIVATSDESAYVRSKAAFV 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE+F  +G +V L++DS+TRFA + RE+    GE P +RGY  SVF++LP LLER 
Sbjct: 239 ATAIAEHFRDEGMHVTLMMDSLTRFAMAEREVGLAMGEPPSSRGYTPSVFAKLPVLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP     G ITAV +VLV+GD+ NDPIAD+VR ILDGHIVL+RSLA  G++P +D L S+
Sbjct: 299 GP--GPVGAITAVYTVLVEGDDLNDPIADAVRGILDGHIVLSRSLANRGQFPAIDVLQSL 356

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL       D ++    +   + R+ E  D+  IG YR G D  +D+A+ ++P I +FL
Sbjct: 357 SRLFPSIADEDHRRAAERVREWMARYGEIEDLFRIGAYRQGTDPAVDEAIQRMPEILEFL 416

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q   +      F+E   +L
Sbjct: 417 RQKKGETV---AFEEAITQL 433


>gi|226324165|ref|ZP_03799683.1| hypothetical protein COPCOM_01944 [Coprococcus comes ATCC 27758]
 gi|225207714|gb|EEG90068.1| hypothetical protein COPCOM_01944 [Coprococcus comes ATCC 27758]
          Length = 503

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 181/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E YS  L V   G +  +      V  L +    G+ +      S+  G V+ 
Sbjct: 10  SVIKEQIERYSSELNVSDVGTVIQVADGIARVHGL-ENAMQGELLEFP---SEVYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I+ GD V   GR   +    C  GRV+NALG+PIDG   + +  
Sbjct: 66  LEEDNVGAVLLGDHKNINEGDTVKTTGRVVEVPVGDCMLGRVVNALGQPIDGKGPI-QAT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I    P  ++R+ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 RHRQIERVAPGVISRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V   ++       +  + VVV+T+ E   L+ +AP +   
Sbjct: 185 NQKGQGVKCIYVAIGQKASTVASLVKTLETFGAMDYTTVVVSTASELAPLQYIAPYSGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E +   GD+VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEEWMENGDDVLIVYDDLSKHATAYRTLSLLLKRPPGREAYPGDVFYLHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   +   G  P V+   SVS
Sbjct: 305 SDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRPAVNAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  ++   + ++ E         +   +D    + + Q   I + LK
Sbjct: 365 RVGGSAQIKAMKKIAGTIRIDLAQYREL---ASFAQFGSELDAETSERLAQGVRIKEILK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPQYQP 427


>gi|153012206|ref|YP_001381721.1| ATP synthase CF1 alpha subunit [Medicago truncatula]
          Length = 511

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  + Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIQQYNTEVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   G   +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLLIQEGSSVKATGIIAQIPVSEGYLGRVVNALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +           +++V  T++    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGRRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|254505088|ref|ZP_05117239.1| flagellar protein export ATPase FliI [Labrenzia alexandrii DFL-11]
 gi|222441159|gb|EEE47838.1| flagellar protein export ATPase FliI [Labrenzia alexandrii DFL-11]
          Length = 441

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 165/420 (39%), Positives = 251/420 (59%), Gaps = 5/420 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G ++++  +   +      + +G  ++      N     +V+          P    E +
Sbjct: 18  GRVAAVQGLLVEIAGPIHEMSVGSRLLIDSGEDNPQVPAEVVGFREGHALCMPFSGLEGV 77

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +G   V       + PS  W GRVINALG+PIDG   L  G L  ++ S  PPA  R R
Sbjct: 78  RMGCKAVITSRESAVHPSNAWLGRVINALGEPIDGKGPLPNGGLPRKLRSAPPPASERAR 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V      G+R ++ F   C GQR+G+FAGSG+GKS L+SM AR+   D  +I L+GERGR
Sbjct: 138 VGPPLDLGVRALNTFVTCCEGQRMGIFAGSGVGKSVLMSMLARNTQCDTAVIGLIGERGR 197

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFI +D   + L +SVVVVATSDES ++R+ A   A+T+AE+F  +GD VL ++DS+
Sbjct: 198 EVQEFIEDDLGEEGLARSVVVVATSDESVLMRRQAAYLAMTVAEHFRDEGDKVLCMMDSV 257

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI  + GE P ++GY  +VF+ELPRLLER GP +   G+IT + +VLV+GDN
Sbjct: 258 TRFAMAQREIGLSIGEPPTSKGYTPTVFTELPRLLERAGPGKSGSGSITGLFTVLVEGDN 317

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HN+P+AD+VR ILDGH+V+ R +AE GRYP ++ L SVSR   +    +++ ++     L
Sbjct: 318 HNEPVADAVRGILDGHVVMERGIAERGRYPAINVLKSVSRTMPRCVPPEQQPVLRKAKQL 377

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           +  + +  ++  +G YR G D  +D+A+++   I DFL Q   + ++  + + ++   L+
Sbjct: 378 LSTYTDMEELIRLGAYRRGSDPTVDEAIYRFGPIDDFLNQGKDESTTLFEGYVQLANLLE 437


>gi|257125430|ref|YP_003163544.1| F0F1 ATP synthase subunit alpha [Leptotrichia buccalis C-1013-b]
 gi|257049369|gb|ACV38553.1| ATP synthase F1, alpha subunit [Leptotrichia buccalis C-1013-b]
          Length = 501

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 187/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++     E+Y  +L +   G +  +      +  LS     G+ +  +   
Sbjct: 1   MRIKPEEISKIIRSEIENYKSSLDISNTGTVLEVGDGIARIYGLSD-AMAGELLQFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +    +     G  + I  G +V   G+    P      GRV++ALG PID
Sbjct: 59  --TVGMALNLEESNIGAVIFGKTQGIKEGSIVKGLGKVAEVPAGNELLGRVVDALGTPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+   D  M I  +    + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGSI-TADKYMPIERQASGIIARKPVTQPMQTGIKAIDGMFPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +   + V  +   +G++   V +  +        + +++V AT+ ES  L+
Sbjct: 176 TAIAIDAIINQKNNDVLCVYVAIGQKRSTVAQIYKKLEEAGALEYTIIVAATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP + V + EYF  +G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYSGVAMGEYFMDQGKDVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDKLGGGSITALPIVETRAGDISAYIPTNVISITDGQIFLETDLFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ S +   + ++ E   +     +   +D      +++
Sbjct: 356 AINAGVSVSRVGGAAQIKAMKQVASKVKLELAQYNE---LLAFTQFGSDLDKATRDQLNR 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GSKIMEVLKQPQ 424


>gi|120598253|ref|YP_962827.1| flagellum-specific ATP synthase [Shewanella sp. W3-18-1]
 gi|120558346|gb|ABM24273.1| flagellar protein export ATPase FliI [Shewanella sp. W3-18-1]
          Length = 445

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 156/443 (35%), Positives = 240/443 (54%), Gaps = 9/443 (2%)

Query: 1   MQKN----LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           MQ      L    Q  +       V  G +  +  +    +       +G     +    
Sbjct: 1   MQNRQHQLLSKFHQYIDKVPPFRAVASGQLVRVVGLTLEASG--CRAPVGSLCSIETMAG 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
           D + +V+  + +++Y+ P+     +  G  V   G    +       GRV++  G P+DG
Sbjct: 59  DLVAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L + D      +     ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 119 LGAL-QTDQYAPRHNSAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFIE+ LG+    +SVV+ A +D SP++R  A
Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+
Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  
Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIE 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P + 
Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL+Q+  D  S    Q +  +L
Sbjct: 418 AFLRQTMRDAFSFADSQSMLAQL 440


>gi|170758369|ref|YP_001787980.1| flagellar protein export ATPase FliI [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169405358|gb|ACA53769.1| flagellar protein export ATPase FliI [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 438

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 170/438 (38%), Positives = 252/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           + E + +  +    N     G +  +  +   V  +  +V  G+  +   + +  +  +V
Sbjct: 7   DFEKIEKRIK--ETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +  
Sbjct: 63  VGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEG 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M 
Sbjct: 123 SPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL
Sbjct: 301 NK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S + K        L+  ++ + D+  IG Y  G +  +D A+H    I  FLKQ 
Sbjct: 359 MSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMAIHYHESIISFLKQG 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +  S   F+E T  LQ
Sbjct: 419 IGEHHS---FKESTSILQ 433


>gi|319650869|ref|ZP_08005006.1| F0F1 ATP synthase subunit alpha [Bacillus sp. 2_A_57_CT2]
 gi|317397467|gb|EFV78168.1| F0F1 ATP synthase subunit alpha [Bacillus sp. 2_A_57_CT2]
          Length = 502

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 114/433 (26%), Positives = 180/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N E ++ L +   +N      V   G + S+         L   V  G+ V      
Sbjct: 1   MSINAEEISALIKKQIENYQSEIQVSDVGTVISVGDGIARAHGL-DNVMAGELVEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VMGMAQNLEENNVGIIILGPFTEIREGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GMGPINTTK-SRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +   + ++  + D     I   +G++   VR  +E          ++VV A++ +   L 
Sbjct: 176 TSVAIDTILNQKDQDMVCIYVAIGQKESTVRNAVETLRKQGALDYTIVVTASASQPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ E F   G +VL++ D +T+ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGVTMGEEFMYNGKHVLVVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER       KG  +ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDAKGAGSITALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E       G     +D      +++
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDKATQAKLNR 412

Query: 410 VPIIYDFLKQSPS 422
                + LKQ  +
Sbjct: 413 GARTVEVLKQDLN 425


>gi|296327994|ref|ZP_06870529.1| ATP synthase F1 sector alpha subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296154950|gb|EFG95732.1| ATP synthase F1 sector alpha subunit [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 500

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 181/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K+L +   G +  +      +  LS  V  G+ +         +G  + 
Sbjct: 10  SIIKKEIDNYKKSLEIKTSGTVLEVGDGIARIFGLS-NVMSGELLEFP---HGVMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+    P      GRVINALG PIDG   +   D
Sbjct: 66  LEEDNVGAVILGNASLIKEGDEVRATGKVVSVPAGEDLLGRVINALGDPIDGKGEI-HVD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  K    + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYMPIERKASGIIARQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V +  +          +++V AT+ E+  L+ MAP + V 
Sbjct: 185 NQKGQDVKCIYVAIGQKRSTVAQIYKKLSDLGCMDYTIIVAATASEAAPLQYMAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMEKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKATKAQLERGHRIMEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|241705635|ref|XP_002413266.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|215507080|gb|EEC16574.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
          Length = 555

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 103/425 (24%), Positives = 183/425 (43%), Gaps = 23/425 (5%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           L +  + NL  + G + SI      V  L + +   + V     +S   G  + +  D V
Sbjct: 62  LGQTTTSNLE-ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLEPDNV 116

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            I   G  + I  GD+V   G    +       GRV++ALG PIDG   +        + 
Sbjct: 117 GIVVFGNDKLIREGDIVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPV-ACKGRARVG 175

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARS 184
            K P  + R  V++   TGI+ +D   P+  GQR  +      GK      T+++    +
Sbjct: 176 VKAPGIIPRISVKEPMLTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKHFN 235

Query: 185 DCFD-----KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           D  D       I   +G++   V + ++     D +K +++V AT+ ++  L+ +AP   
Sbjct: 236 DGSDEKKKLYCIYVAIGQKRSTVAQILKRLTSADAMKYTIIVSATASDAAPLQYLAPYAG 295

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER  
Sbjct: 296 CAMGEYFRDNGMHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAA 355

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
                   G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++   S
Sbjct: 356 KMNDTFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLS 415

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+   A +   K++  S+   + ++ E   +     +   +D    + +++   + + 
Sbjct: 416 VSRVGSAAQTKAMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTEL 472

Query: 417 LKQSP 421
           LKQ  
Sbjct: 473 LKQGQ 477


>gi|182418359|ref|ZP_02949654.1| flagellar protein export ATPase FliI [Clostridium butyricum 5521]
 gi|237666511|ref|ZP_04526496.1| flagellar protein export ATPase FliI [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377741|gb|EDT75285.1| flagellar protein export ATPase FliI [Clostridium butyricum 5521]
 gi|237657710|gb|EEP55265.1| flagellar protein export ATPase FliI [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 438

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 166/435 (38%), Positives = 244/435 (56%), Gaps = 10/435 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           ++ N E + +     S       G +  +  +   V  +  +V  G+  +   + N    
Sbjct: 4   LEVNFERILKKINSTSPMYS--EGIVKKVIGLTIEVQGIKAFV--GELCIIYNERNLPIN 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P+     IS G  V    +   +  S    G +I+ LGKP+D  +S
Sbjct: 60  CEVVGFRDEFVILMPLDELIGISPGCRVVPQHKPLSVKCSDKLLGHIIDGLGKPLD-CES 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L        + ++ P  M R+R+++   TG+R ID F  +  GQRIG+FAGSG+GKST L
Sbjct: 119 LEYDGDDYPLENEAPDPMKRKRIKEIMPTGVRAIDGFLTVGDGQRIGIFAGSGVGKSTTL 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +ISL+GERGREV EF+ +D   + +KKSVVV ATSD+  ++R    LT
Sbjct: 179 GMIAREAKADVNVISLIGERGREVLEFMEKDLGPEGMKKSVVVCATSDKPALIRMKGALT 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  V+L++DS+TR+A + RE+    GE P  +GY  SVF++LP+L+ER 
Sbjct: 239 ATAIAEYFRDQGKKVILMMDSVTRYAMAQREVGLAIGEPPATKGYTPSVFAKLPKLMERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S    G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D L SV
Sbjct: 299 GTS--MDGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRDLAHKNHYPAIDVLNSV 356

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL  +    D K   S    L+  ++++ D+  IG Y  G +  +D AV     + +FL
Sbjct: 357 SRLMSQIAPKDHKDSASLARDLLATYKDSEDLINIGAYVKGSNKKIDMAVAYNDKLNNFL 416

Query: 418 KQSPSDLSSEDVFQE 432
            Q   + +S D  Q+
Sbjct: 417 CQGIDEKTSFDETQQ 431


>gi|169142951|ref|YP_001687373.1| ATP synthase subunit alpha [Oenothera biennis]
 gi|190358188|sp|B0Z4W6|ATPA_OENBI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|159793124|gb|ABW98878.1| ATP synthase subunit alpha [Oenothera biennis]
          Length = 505

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 181/421 (42%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIYSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
             + VI     +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGNNVICVYVAIGQKASSVAQVVNALQERGAMEYTIVVAEAADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|158334080|ref|YP_001515252.1| F0F1 ATP synthase subunit alpha [Acaryochloris marina MBIC11017]
 gi|190358137|sp|B0BZL2|ATPA1_ACAM1 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|158304321|gb|ABW25938.1| ATP synthase F1, alpha subunit [Acaryochloris marina MBIC11017]
          Length = 505

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 180/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y + + V   G +  +      V  L Q    G+ +  +      +G  + + 
Sbjct: 13  IRQQIEQYDQQVKVDNVGTVLQVGDGIARVYGLEQ-AMAGELLDFEDG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G ++  G  V   G+  +I       GRV++AL +PIDG   +   +  
Sbjct: 69  EDNVGAVLMGDGRDLQEGSTVRSTGKIAQIPVGDALIGRVLDALARPIDGKGDINTSETR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
           + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++  +
Sbjct: 129 L-IESPAPGIIERKSVYEPMQTGITAIDSMVPIGRGQRELIIGDRQTGKTAVAIDTILNQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +E          +VVV A +++   L+ +AP T   IA
Sbjct: 188 KSEDVICVYVAIGQKASTVAQVVEVLRERGALDYTVVVAANANDPATLQYLAPYTGAAIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYNGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSP 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ELGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGLRPAINAGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDQATQNQLARGARLREILKQP 424

Query: 421 PSDLSSED 428
                  +
Sbjct: 425 QYSPLPVE 432


>gi|156598737|gb|ABU85623.1| ATP synthase CF1 alpha subunit [Scaevola aemula]
          Length = 504

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 182/422 (43%), Gaps = 14/422 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            ++A+   +  VV  G +  +      +  L + V  G+ V  +      +G  + +  +
Sbjct: 15  ERIAQYNREVRVVNTGTVLQVGDGIARIHGLDE-VMAGELVDFEEG---TIGIALNLESN 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  + 
Sbjct: 71  NVGVVLMGNGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSEYRL- 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +   
Sbjct: 130 IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQG 189

Query: 188 DKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEY 244
             VI     +G++   V + +  +        ++VV  T+     L+ +AP T   +AEY
Sbjct: 190 QNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETAASPATLQYLAPYTGAALAEY 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER        
Sbjct: 250 FMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRL 309

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+  
Sbjct: 310 GEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGLSVSRVGS 369

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     K++   L   + +F E         +   +D      + +   + + LKQS S
Sbjct: 370 AAQIKAMKQVAGKLKLELAQFAELE---AFAQFASALDKAAQNQLARGQRLRELLKQSQS 426

Query: 423 DL 424
           D 
Sbjct: 427 DP 428


>gi|87301252|ref|ZP_01084093.1| ATP synthase subunit A [Synechococcus sp. WH 5701]
 gi|87284220|gb|EAQ76173.1| ATP synthase subunit A [Synechococcus sp. WH 5701]
          Length = 505

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 110/423 (26%), Positives = 175/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V   G + S+      +  L Q V  G+ V     +    G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGTVLSVGDGIARIYGL-QQVMSGELVQFDDGSE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +  G  I  G  V    R   +       GRVIN LG PIDG   +    
Sbjct: 67  LEDDNVGAVLLTDGIGIREGSTVKATTRIAEVPVGEAMLGRVINPLGVPIDGKGEIATTS 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E          +VVV A++ E   L+ +AP T   
Sbjct: 186 NQKGEDVVCVYVAIGQKSASVANVVEVLRERGALDYTVVVAASASEPAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  +G   L++ D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAESFMYEGKATLVVYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDEMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E         +   +D      + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDEL---AAFSQFASDLDAATQAQLGRGKRLRELLK 422

Query: 419 QSP 421
           Q  
Sbjct: 423 QPQ 425


>gi|126723802|gb|ABO26815.1| ATP synthase CF1 alpha subunit [Carthamus tinctorius]
          Length = 508

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPEREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|114329641|ref|YP_740460.1| ATP synthase CF1 alpha subunit [Citrus sinensis]
 gi|122166198|sp|Q09MJ3|ATPA_CITSI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|113952607|gb|ABI49005.1| ATP synthase CF1 alpha subunit [Citrus sinensis]
          Length = 507

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 184/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNIGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTFQERGAMDYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER     S
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGS 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ+
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQA 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|24251287|gb|AAN46406.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
          Length = 442

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 167/430 (38%), Positives = 244/430 (56%), Gaps = 12/430 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +   A   GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELIGLSRETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGES--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D  +    L  L+ ++ E   +  +G YR G D + D+A++++  I DFL Q    LS  
Sbjct: 369 DHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAINRIDAIRDFLSQPTDQLSD- 427

Query: 428 DVFQEITKKL 437
             ++   ++L
Sbjct: 428 --YESTLEQL 435


>gi|227874290|ref|ZP_03992478.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227839864|gb|EEJ50306.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 506

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 111/435 (25%), Positives = 184/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAED---YSKNLVVQG--GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++      Y +N +VQ   G + ++      V+ L+  +  G+ +  +   
Sbjct: 1   MELKPEKISEVIRSQIKYYQNAIVQNETGTVLTVGDGIARVSGLTNCMS-GELLEFEDG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +    V     G    I  G  V   GR   +       GRV+NA+G+PID
Sbjct: 59  --TFGMAQNLEETSVSAVLFGSDVGIREGQSVKRTGRVVSVPVGEQLIGRVVNAIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GIGPIESTEFRA-VESPAPGIIKRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        I   +G++   V   + +         S+VV AT+ E   L+
Sbjct: 176 TTIAIDTIINQKGKDVICIYVAIGQKRSTVTALVNELKEAGAMDYSIVVAATASEPSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF ++G +VL+I D +++ A + R I+      P    YP  VF    
Sbjct: 236 YIAPYAECAMGEYFMNQGKHVLIIYDDLSKHAVAYRAISLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSPELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D    + + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLVYSQYRELQSFAQFG---SDLDQDTKQRLAQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ   + 
Sbjct: 413 GERIVEVLKQGKGEP 427


>gi|7524606|ref|NP_042360.1| ATP synthase CF1 alpha subunit [Pinus thunbergii]
 gi|1168568|sp|P41602|ATPA_PINTH RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|1262600|dbj|BAA04319.1| H+-ATPase alpha subunit [Pinus thunbergii]
          Length = 494

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGKISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|157131648|ref|XP_001655906.1| ATP synthase alpha subunit mitochondrial [Aedes aegypti]
 gi|94468442|gb|ABF18070.1| mitochondrial ATP synthase alpha subunit [Aedes aegypti]
 gi|108871446|gb|EAT35671.1| ATP synthase alpha subunit mitochondrial [Aedes aegypti]
          Length = 551

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 177/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   + K +    +  K P  + R  
Sbjct: 124 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGEI-KTNQRFRVGIKAPGIIPRVS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNNGTDESKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLTDAGAMNYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNPTLGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|83647858|ref|YP_436293.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
 gi|83635901|gb|ABC31868.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
          Length = 456

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 161/418 (38%), Positives = 248/418 (59%), Gaps = 6/418 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81
            G ++ +     T+  +   + LG+  + + +    +  +V+  + + VY+ P+   E +
Sbjct: 23  NGRLTRVVG--LTLEAVGCPMTLGERCLIEVRGGRMVEAEVVGFSDERVYLMPLAAVEGL 80

Query: 82  SLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V    G  RI   AC  GRV++  G+P+DG   L + +  +E+       ++R  
Sbjct: 81  QPGAKVKPMSGVGRIGVGACLLGRVLDGAGEPLDGRGPL-QAEHHVELFGAPINPLHRAP 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D +++ LVGERGR
Sbjct: 140 IREKLDVGIRAINSLLTVGIGQRLGLFAGSGVGKSMLLGMMTRFTTADIIVVGLVGERGR 199

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFIED LG+  L+++VVV + +D+SP++R  A +    IAEYF   G NVLL++DS+
Sbjct: 200 EVKEFIEDILGEEGLRRAVVVASPADDSPLMRLRAAVLTTRIAEYFRDLGKNVLLLMDSL 259

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + REIA   GE P  +GYP SVF++LP+L+ER G  +   G+ITA  +VL +GD+
Sbjct: 260 TRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERAGNGKPGGGSITAFYTVLTEGDD 319

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             DPIAD+ R+ILDGHIVLNR LAEEG YP +D  AS+SR+  +  + D  +       L
Sbjct: 320 QQDPIADAARAILDGHIVLNRRLAEEGHYPAIDVEASISRVMPQVTTPDYLQRAQRFKQL 379

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             R+++TRD+  +G Y PG D   D A+ + P +  FL+QS  + ++ +   +   +L
Sbjct: 380 YARYQQTRDLISVGAYAPGSDKETDYAIERFPHMRKFLQQSLRERATLNDSAQGLNQL 437


>gi|55824802|gb|AAV66483.1| F1-ATPase alpha subunit [Justicia carnea]
          Length = 424

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 175/413 (42%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVQGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++G  V + ++    G+  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKGSTVAQLVKILSEGNAFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ+ 
Sbjct: 356 MKEVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQAQ 405


>gi|159161145|ref|YP_001542432.1| ATP synthase CF1 alpha subunit [Ceratophyllum demersum]
 gi|190358244|sp|A8SE59|ATPA_CERDE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|148508428|gb|ABQ81435.1| ATP synthase CF1 alpha subunit [Ceratophyllum demersum]
 gi|227481104|emb|CAP62483.1| ATPase alpha subunit [Ceratophyllum demersum]
          Length = 507

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 184/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREIKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SSNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSESYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D S  L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSSATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|58579714|ref|YP_198730.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84621742|ref|YP_449114.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|188574355|ref|YP_001911284.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|7350913|gb|AAF61281.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
 gi|9711583|dbj|BAB07852.1| HrpB6 [Xanthomonas oryzae pv. oryzae]
 gi|50428346|dbj|BAD29983.1| HrcN [Xanthomonas oryzae pv. oryzae]
 gi|58424308|gb|AAW73345.1| HrcN protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365682|dbj|BAE66840.1| HrcN protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188518807|gb|ACD56752.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 442

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 167/430 (38%), Positives = 244/430 (56%), Gaps = 12/430 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +   A   GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELIGLSRETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGES--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D  +    L  L+ ++ E   +  +G YR G D + D+A++++  I DFL Q    LS  
Sbjct: 369 DHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAINRIDAIRDFLSQPTDQLSD- 427

Query: 428 DVFQEITKKL 437
             ++   ++L
Sbjct: 428 --YESTLEQL 435


>gi|22266797|gb|AAM94911.1|AF522463_6 subunit alpha [Ilyobacter tartaricus]
          Length = 469

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 110/432 (25%), Positives = 186/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     E+Y K+L +   G +  +      +  LS     G+ +      
Sbjct: 1   MKIRPEEISSIIKTEIENYKKSLDIKTSGSVVEVGDGIARIYGLS-NAKAGELLEFPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G V+ +  + V    +G    +  GD V   G     P      GRV+NALG+PID
Sbjct: 59  --IKGMVLNLEENNVGAVLLGDPTGVKEGDEVRATGEVAAVPAGEGLLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G     K +  M +  K    + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGD-AKIEKRMMLERKAHGIIARKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K I   +G+R   V + ++          + VV AT+ E   L+
Sbjct: 176 TAVALDAIINQKGTGVKCIYVAIGQRRSTVAQIVKKLENAGAMEYTTVVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP   V++ EYF  KG++VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YMAPYCGVSMGEYFMDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 296 RLLERAAKISDELGGGSITALPIIETQAGDVSAFIPTNVISITDGQIFLDSELFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ + +   + ++ E   +     +   +D      + +
Sbjct: 356 AINAGISVSRVGGSAQIKAMKQVAAKVKLELAQYSE---LLTFAQFGSDLDKATMAQLER 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GHRIMEILKQDQ 424


>gi|116493067|ref|YP_804802.1| F0F1 ATP synthase subunit alpha [Pediococcus pentosaceus ATCC
           25745]
 gi|122265469|sp|Q03EL2|ATPA_PEDPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116103217|gb|ABJ68360.1| ATP synthase F1 subcomplex alpha subunit [Pediococcus pentosaceus
           ATCC 25745]
          Length = 505

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 180/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V + G ++ +         L+  +  G+ +          G V  
Sbjct: 10  ALIKQQLENYQAELNVEETGTVTYVGDGIARAHGLNNALS-GELLEFSNG---VFGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD+V   GR   +       GRV+N LG+P+DG  ++ +  
Sbjct: 66  LESNDVGIVIMGNYDGIHEGDVVKRTGRIMEVPVGDALIGRVVNPLGEPLDGKGAI-QTT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  + +K P  M R+ VE+  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 125 KTRPVENKAPGVMQRKSVEQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A   E   +  +AP     
Sbjct: 185 NQKDQDMICIYVAIGQKESTVRTQVETLRRYGAMDYTIVVSAGPSEPAPMLYLAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG + L+      G  P +D   SVS
Sbjct: 305 SDDLGGGSMTALPFVETKAGDVSAYIPTNVISITDGQVFLDGDYFNSGTRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDKATQAKLARGRRTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 422 QPLHQPLSVE 431


>gi|55824800|gb|AAV66482.1| F1-ATPase alpha subunit [Streptocarpus holstii]
          Length = 424

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 405


>gi|84515108|ref|ZP_01002471.1| ATP synthase subunit A [Loktanella vestfoldensis SKA53]
 gi|84511267|gb|EAQ07721.1| ATP synthase subunit A [Loktanella vestfoldensis SKA53]
          Length = 511

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 104/446 (23%), Positives = 187/446 (41%), Gaps = 28/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MAIQASEISAILKDQIKNFGQDAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   EI  GD+V         P      GRV++ LG P+D
Sbjct: 59  --IRGMALNLETDNVGVVIFGSDREIKEGDVVKRTKSIVDVPIGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K        SK P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTTKRAVADSKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
                 T+L+  + +D           +   +G++   V + ++       ++ ++VV A
Sbjct: 176 TAVALDTILNQKSYNDAATNEYDKLYCVYVAIGQKRSTVAQLVKKLEESGAIEYTIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP  A  +AE+F   G + L+I D +++ A S R+++      P    Y
Sbjct: 236 TASDPAPMQFLAPYAATAMAEHFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ G  ++TA+  +   G + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSAKLNEDNGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D
Sbjct: 356 ELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
               + +++   + + +KQ      +
Sbjct: 413 AATQQLLNRGARLTELMKQPQYSPLT 438


>gi|323530315|ref|YP_004232467.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1001]
 gi|323387317|gb|ADX59407.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1001]
          Length = 470

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 168/438 (38%), Positives = 248/438 (56%), Gaps = 11/438 (2%)

Query: 6   ETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQ 61
           E LA   E    S   + + G +  +      V  L   V LG+    +  N   L   +
Sbjct: 35  ERLADAIEHEILSTATIARSGKVLEVIGTLVKVAGLD--VTLGELCELRAANGKLLQHAE 92

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI    D+  + P     +IS    V   GR   +       GRVI++LG+PIDG   LG
Sbjct: 93  VIGFTRDVALLSPFSRLADISRSTRVVGLGRSLTVPVGDSLLGRVIDSLGEPIDGLGPLG 152

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +    + +  P  M R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL M
Sbjct: 153 ATEQR-PVFANPPSPMTRRMIDTPLATGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLLGM 211

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
           FAR    D  +I+L+GERGREVREF+E  LG + + +SVVV ATSD S I R  A   A 
Sbjct: 212 FARGAQCDVTVIALIGERGREVREFVELILGAEGMARSVVVCATSDRSSIERAKAAYVAT 271

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE+F  +G  VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G 
Sbjct: 272 AIAEHFRDRGQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGM 331

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+ITA+ +VL + ++ NDPIA+ VR I+DGH++L+R +A + +YP +D LAS+SR
Sbjct: 332 GE--HGSITAMYTVLAEDESGNDPIAEEVRGIVDGHMILSREIAAKNQYPAIDVLASLSR 389

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +  + D  +  + L  L+ +  E   +  IG Y+PG + + D+A+ ++  I  F  Q
Sbjct: 390 VMPQVMTPDYVRAAARLRELLAKHREVEMLLQIGEYQPGGNPLADEAIRKIDAIRAFFNQ 449

Query: 420 SPSDLSSEDVFQEITKKL 437
           +  +L++    +    +L
Sbjct: 450 ATHELAAPQDTEARLFQL 467


>gi|158428982|pdb|2JIZ|A Chain A, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428983|pdb|2JIZ|B Chain B, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428984|pdb|2JIZ|C Chain C, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428989|pdb|2JIZ|H Chain H, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428990|pdb|2JIZ|I Chain I, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428991|pdb|2JIZ|J Chain J, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428999|pdb|2JJ1|A Chain A, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429000|pdb|2JJ1|B Chain B, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429001|pdb|2JJ1|C Chain C, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429006|pdb|2JJ1|H Chain H, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429007|pdb|2JJ1|I Chain I, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429008|pdb|2JJ1|J Chain J, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429013|pdb|2JJ2|A Chain A, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429014|pdb|2JJ2|B Chain B, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429015|pdb|2JJ2|C Chain C, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429020|pdb|2JJ2|H Chain H, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429021|pdb|2JJ2|I Chain I, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429022|pdb|2JJ2|J Chain J, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158431066|pdb|2V7Q|A Chain A, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431067|pdb|2V7Q|B Chain B, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431068|pdb|2V7Q|C Chain C, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1
          Length = 510

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 27  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 82

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 83  KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 142 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 201

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 202 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 262 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 322 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 381

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 382 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 432


>gi|115278595|ref|YP_762487.1| ATPase subunit 1 [Tripsacum dactyloides]
 gi|114432086|gb|ABI74635.1| ATPase subunit 1 [Tripsacum dactyloides]
          Length = 508

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 179/431 (41%), Gaps = 23/431 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +++   Y+   V + G + S+      V  L++ +  G+ V      S   G  + +  +
Sbjct: 16  SRMINFYTNLKVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENE 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L   +    
Sbjct: 72  NVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRR 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 131 VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQ 190

Query: 188 D-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     N  + S++V AT+ +   L+ +AP
Sbjct: 191 MNSRGTNESETLYCVYVAIGQKRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAP 250

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 251 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 310

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 311 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 370

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  S    + ++ E   +     +   +D      +++   +
Sbjct: 371 GLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARL 427

Query: 414 YDFLKQSPSDL 424
            +  KQ   + 
Sbjct: 428 TEVPKQPQYEP 438


>gi|120554911|ref|YP_959262.1| flagellum-specific ATP synthase [Marinobacter aquaeolei VT8]
 gi|120324760|gb|ABM19075.1| flagellar protein export ATPase FliI [Marinobacter aquaeolei VT8]
          Length = 463

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 162/436 (37%), Positives = 246/436 (56%), Gaps = 10/436 (2%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L QL    S     +  G ++ +     T+ C+   + +GD  + QG ++ ++  +V+
Sbjct: 7   ERLRQLQGAISDEPAPELSGRLTRMVG--LTLECVGCPMVVGDRCLIQGDSATSVEAEVV 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
               D VY+ P+   E +  G  V       R+       GRV+N  G P+DG   L + 
Sbjct: 65  GFEEDKVYLMPLTAIEGLKPGARVIPLASASRVPVGPQMLGRVVNGAGDPLDGKGPL-QA 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  +++   +   +NR  V +    GIR I+    +  GQR+G+FAGSG+GKS LL M  
Sbjct: 124 EARVQLTGDIINPLNRAPVRQSMDVGIRAINALLTVGQGQRLGLFAGSGVGKSMLLGMMT 183

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D  ++ L+GERGREV+EFIED LGD  L +SVVV A +D+SP++R  A +    I
Sbjct: 184 RFTDADITVVGLIGERGREVKEFIEDILGDEGLARSVVVAAPADDSPLMRLRAAMLTTRI 243

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEY+  +G  VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G   
Sbjct: 244 AEYYRDQGKRVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGR 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LAEEG YP +D  AS+SR+ 
Sbjct: 304 PGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVM 363

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   ++          +  R+++ RD+  +G Y  G D   D A+  +  +  FL+Q  
Sbjct: 364 PQVTDSEHFSRAQRFKQVYSRYQQARDLISVGAYVKGSDPETDFAIQHIGNMSQFLQQGL 423

Query: 422 SDLSSEDVFQEITKKL 437
           ++ +      E  ++L
Sbjct: 424 NESA---PLTEAIEQL 436


>gi|306991564|pdb|2XND|A Chain A, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991565|pdb|2XND|B Chain B, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991566|pdb|2XND|C Chain C, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
          Length = 492

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 9   ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 64

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 65  KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 124 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 183

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 184 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 244 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 303

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 304 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 364 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 414


>gi|291165817|gb|EFE27865.1| ATP synthase F1, alpha subunit [Filifactor alocis ATCC 35896]
          Length = 503

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 107/437 (24%), Positives = 182/437 (41%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + ++ L ++  KN          G +  I      ++ L   +  G+ +  +   
Sbjct: 1   MDIRPDEISALIKERIKNYGYNAHFKDVGKVLEIGDGIAKISGLEDCMS-GEILEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +    V    +G  + I  GD V   G   ++       GRV+NALG+PID
Sbjct: 59  --VYAMALNLEESSVGAVMLGSDKGIKEGDAVKTTGNVVQVPVGEQLLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  M I  K    + R++V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPILTKEY-MPIERKAAGIIEREKVSEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +T+      +        +   +G++   V + +E          ++VV AT+ E   L+
Sbjct: 176 TTIAIDTILNQKGKDVICVYVAIGQKLSTVVQIVETLEKQGALDYTIVVAATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G +VL + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFMDRGKHVLCVYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     KE   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSKEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L     ++ E +       +   +D      + +
Sbjct: 356 AVNPGISVSRVGGNAQLKPMKKVSGTLRLDYSQYRELQ---AFSQFGSDLDADTKARLDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              I + LKQ  +   S
Sbjct: 413 GERIVEILKQGQASPLS 429


>gi|289577862|ref|YP_003476489.1| ATP synthase F1 subunit alpha [Thermoanaerobacter italicus Ab9]
 gi|297544151|ref|YP_003676453.1| ATP synthase F1 subunit alpha [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289527575|gb|ADD01927.1| ATP synthase F1, alpha subunit [Thermoanaerobacter italicus Ab9]
 gi|296841926|gb|ADH60442.1| ATP synthase F1, alpha subunit [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 506

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 110/440 (25%), Positives = 183/440 (41%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + E+  KN        + G++         +  L     LG+ V  +   
Sbjct: 1   MAIKPEEISSVIEEKIKNFDFNIETQEIGHVIQSGDGIAKIYGL-DNAMLGEMVEFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S  +G V+ +  D V    +G  E++  GD V   G+   +       GRV+N LG+PID
Sbjct: 57  SGVVGMVLNLEEDTVGAVVIGDPEKVKEGDTVKRTGKIMEVPVGKEMLGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I    PP + R+ V+   +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPINY-EAERPIEYPAPPIIKRKSVDTPLQTGILAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   ++          + VV +T+ +S  L+
Sbjct: 176 TAIAIDTIINQKDKGVYCIYVAIGQKASTIAGIVDMLQKHGAMEYTTVVASTASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E+F  +G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEHFMYQGKDVLVVYDDLSKHAIAYRTISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSARLADEYGGGSLTALPIVETLAGDISAYIPTNVISITDGQIYLESELFHAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   L   + ++ E +     G     +D      + Q
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKKVAGHLRLELSQYRELQVFARFG---SDLDQATLDVLRQ 412

Query: 410 VPIIYDFLKQSPSD-LSSED 428
              I +  KQ     +  ED
Sbjct: 413 GERIIEITKQPQYQPMPVED 432


>gi|61417382|gb|AAX46317.1| F1-ATPase alpha subunit [Cuscuta japonica var. formosana]
 gi|62363271|gb|AAX81927.1| F1-ATPase alpha subunit [Cuscuta japonica var. japonica]
          Length = 426

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 174/410 (42%), Gaps = 20/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--------SMFARSDCFDKVIISL 194
           +  +TG++ +D   P+  GQR  +      GK+ +          + +R       +   
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRESETLYCVYVA 178

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L
Sbjct: 179 IGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHAL 238

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVI 311
           +I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+ 
Sbjct: 239 IIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALP 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K+
Sbjct: 299 VIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQ 358

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 VCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 405


>gi|294932610|ref|XP_002780357.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239890282|gb|EER12152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 554

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 96/428 (22%), Positives = 171/428 (39%), Gaps = 23/428 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            ++A       V + G + S+      +  L+  V  G+ V          G  + +  D
Sbjct: 51  ERIAGFKDHKDVDEVGLVLSVADGIARIYGLN-NVQAGEMVEFSCG---LKGMALNLETD 106

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G    I  GD V        +       GRV++ LG PID    +    L   
Sbjct: 107 NVGVVVFGEDRNILEGDSVKRTKAIVDVPVGKELLGRVVDGLGNPIDDMGPIN-AKLRSR 165

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +   TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 166 VEVKAPGIIPRQSVSEPMSTGLKAVDSLIPIGRGQRELIIGDRQTGKTAIAVDTILNQKQ 225

Query: 188 D----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
                        +   +G++   V + +E          S VV AT+ +   L+ +AP 
Sbjct: 226 VNENPDPTKHLYCVYVAIGQKRSTVAQIVEILRKFGCMSYSTVVAATASDPAPLQYLAPY 285

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +   + EYF   G + +++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 286 SGCAMGEYFRDNGMHSVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 345

Query: 297 IGPSE---KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
                   K+ G++TA+  +     + +  I  +V SI DG I L   L  +G  P V+ 
Sbjct: 346 AAKMNARTKKGGSLTALPIIETQAGDVSAFIPTNVISITDGQIFLESELFYKGIRPAVNV 405

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A +   K++  +L   + ++ E   +     +   +D    + + +  I+
Sbjct: 406 GLSVSRVGSAAQTKAMKQVAGTLKLELAQYRE---VAAFAQFGSDLDQATQQQLLRGGIL 462

Query: 414 YDFLKQSP 421
            + LKQ  
Sbjct: 463 TELLKQKQ 470


>gi|148677501|gb|EDL09448.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_e [Mus musculus]
          Length = 503

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 20  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 75

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 76  KEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 134

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 135 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 194

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 195 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 254

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 255 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 314

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 315 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 374

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 375 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 425


>gi|6561666|gb|AAF17010.1|AF197678_1 ATPase alpha subunit [Calycanthus floridus]
          Length = 424

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 175/416 (42%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  SL   + ++ E   +     +   +D +    +++   + + LKQ   + 
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVLKQPQYEP 408


>gi|307944615|ref|ZP_07659955.1| flagellar protein export ATPase FliI [Roseibium sp. TrichSKD4]
 gi|307772364|gb|EFO31585.1| flagellar protein export ATPase FliI [Roseibium sp. TrichSKD4]
          Length = 441

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 169/435 (38%), Positives = 257/435 (59%), Gaps = 5/435 (1%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNL-GQVIRIN 66
           A  +E  S       G + ++  +   V      + +G  ++ + G++   +  +V+   
Sbjct: 3   ALFSEIDSLMTTKIYGRVVAVQGLLVEVAGPIHEMSVGSLLMIEIGEDQPKVPAEVVGFR 62

Query: 67  LDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            +     P    E + +G   V H     + PS  W GRVINA+G+PIDG   L +G+  
Sbjct: 63  DNHALCMPFSGLEGVRMGCKAVIHARESVVHPSDAWLGRVINAMGEPIDGKGELPRGEAP 122

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + +  PPA  R RV      G+R ++ F   C GQR+G+FAGSG+GKS L+SM AR+ 
Sbjct: 123 RWMRAAPPPASERARVGPPLDLGVRALNTFVTCCQGQRMGIFAGSGVGKSVLMSMLARNT 182

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I L+GERGREV+EFI +D   + L +SVVVVATSDES ++R+ A    +T+AE+
Sbjct: 183 DCDISVIGLIGERGREVQEFIEDDLGEEGLARSVVVVATSDESVLMRRQAAYLTMTMAEH 242

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G NVL ++DSITRFA + REI  + GE P ++GY  +VF+ELPRLLER GP    K
Sbjct: 243 FRDEGQNVLCMMDSITRFAMAQREIGLSIGEPPTSKGYTPTVFTELPRLLERAGPGLVGK 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT + +VLV+GDNHN+P+AD+VR ILDGH+V+ RS+AE GRYP ++ L SVSR   + 
Sbjct: 303 GSITGLFTVLVEGDNHNEPVADAVRGILDGHVVMERSIAERGRYPAINVLKSVSRTMPRC 362

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + + ++     L+  + +  ++  +G YR G D  +D+A+ +   I  FL Q   + 
Sbjct: 363 VPEEYQPILRKAKQLLSTYTDMEELIRLGAYRKGSDATVDEAISRFEPIETFLNQRKGEA 422

Query: 425 SS-EDVFQEITKKLQ 438
           +S  + + ++   L+
Sbjct: 423 TSLSEGYLQLANLLE 437


>gi|317407757|gb|EFV87684.1| BscN protein [Achromobacter xylosoxidans C54]
          Length = 455

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 151/411 (36%), Positives = 230/411 (55%), Gaps = 11/411 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLDIVYICPVGIGE 79
             G ++ +      +  +   V +G+  + +    D    G+V+    D   + PVG   
Sbjct: 36  VRGRVTQVIGTI--IKAVVPAVKVGEVCLLRNPGEDFEMKGEVVGFVKDAALLTPVGDMH 93

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD--DSLGKGDLSMEIMSKVPPAM 136
            IS    V   GR   +   A   GRV++ LG+P+D D    L        + +  P  +
Sbjct: 94  GISSSTEVIPTGRSHMVPVGAGLLGRVLDGLGRPLDADRLGPLEASKF-YPVFADAPDPL 152

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ + +  + G+R +D       GQR+G+FA +G GKSTL+ M  +    D  +++L+G
Sbjct: 153 TRRIIHEPLELGVRALDGLLTCGEGQRMGIFAAAGGGKSTLMGMLVKGAAVDVTVVALIG 212

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREF+  +   D  ++SV+V ATSD+S + R  A   A  IAEYF  +G  VL +
Sbjct: 213 ERGREVREFLEHELGEDGRRRSVIVCATSDKSSMERAKAAYVATAIAEYFRDQGKKVLFL 272

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER+G ++K  G+ITA+ +VLV
Sbjct: 273 MDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPRLMERVGMNDK--GSITALYTVLV 330

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+  +P+AD  RSILDGHIVL+R LA    YP +D LAS SR+ +     + K     
Sbjct: 331 EGDDMTEPVADETRSILDGHIVLSRKLAASNHYPAIDVLASASRVMNAVVRPEHKAAAGR 390

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +  L+ +++E   +  IG Y+PG D   D+A+ ++  I  FL+Q   + S+
Sbjct: 391 IRELMAKYQEVELLVKIGEYKPGGDAATDEALRKIDAIRGFLRQRTEERST 441


>gi|238922548|ref|YP_002936061.1| ATP synthase F1, alpha subunit [Eubacterium rectale ATCC 33656]
 gi|238874220|gb|ACR73927.1| ATP synthase F1, alpha subunit [Eubacterium rectale ATCC 33656]
 gi|291526385|emb|CBK91972.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium rectale DSM
           17629]
 gi|291526830|emb|CBK92416.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium rectale
           M104/1]
          Length = 501

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 102/432 (23%), Positives = 179/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K    Q      G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLKPEEISSVIKEQIKRYASQLEVADVGTVIQVADGIARIHGL-ENAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G    I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGAVLLGQQRNINEGDTVKTTGRVVEVPVGDAMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D   +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QSDKYRQIERVASGVISRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   + +         + VV AT+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVKCIYVAIGQKASTVASIVNELEEFGAMSYTTVVAATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I E +   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAIGEEWMENGQDVLIVYDDLSKHAAAYRTLSLLLKRAPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARLSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+ + +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKIAAPIRVELAQYRE---LAAFSQFGSELDASTAEQLAQ 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GARIKEILKQPQ 424


>gi|166165274|gb|ABY83982.1| atp1 [Secale strictum]
          Length = 495

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 175/442 (39%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G+ TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 TQALLNRGARLTEVPKQPQYEP 438


>gi|55824836|gb|AAV66500.1| F1-ATPase alpha subunit [Digitalis purpurea]
          Length = 424

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 174/413 (42%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 405


>gi|11466531|ref|NP_044780.1| ATP synthase F1 subunit alpha [Reclinomonas americana]
 gi|2258361|gb|AAD11895.1| ATP synthase F1 subunit alpha [Reclinomonas americana]
          Length = 512

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 107/435 (24%), Positives = 184/435 (42%), Gaps = 23/435 (5%)

Query: 3   KNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +  + L +   +  + L V + G + SI      V  L+  V  G+ V          G 
Sbjct: 7   EQFKILEERITNAYRELDVEEIGRVISIGDGIARVYGLN-NVQAGEMVEFPKAG--IKGM 63

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V I   G    I+ GD+V   G    +       GRV++ALG PIDG   + 
Sbjct: 64  ALNLETDNVGIVLFGNDRAIAEGDIVRRTGAIVDVPVGKGLLGRVVDALGNPIDGKGPIQ 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----S 175
             +    +  K P  ++R+ V +   TGI+ ID   P+  GQR  +      GK      
Sbjct: 124 TTE-RRRVEVKAPGILSRKSVHEPMSTGIKAIDCLVPIGRGQRELIIGDRQTGKTAIALD 182

Query: 176 TLLSMFARSDCFDK------VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
           T+L+    ++   K       I   +G++   V + ++     D LK +++V +T+ E  
Sbjct: 183 TMLNQKLINESTQKESEKLYSIYVAIGQKRSTVAQLVQTLEEYDALKYTIIVASTASEPA 242

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +   I E+F   G + L+I D +++ A + R+ +      P    YP  VF 
Sbjct: 243 PLQFLAPYSGCAIGEFFRDNGMHGLIIYDDLSKQAVAYRQTSLLLRRPPGREAYPGDVFY 302

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L   G
Sbjct: 303 LHSRLLERAAKMSDKDGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYSG 362

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V    SVSR+   A     K++  +L   + ++ E   +     +   +D      
Sbjct: 363 LRPAVSVGLSVSRVGSAAQIKAMKQVGGTLKLDLAQYRE---VAAFAQFGSDLDAATLSQ 419

Query: 407 VHQVPIIYDFLKQSP 421
           +++   + + LKQ+ 
Sbjct: 420 LNRGERLTELLKQAQ 434


>gi|224179400|ref|YP_002600829.1| CF1 alpha subunit of ATP synthase [Pycnococcus provasolii]
 gi|217314443|gb|ACK36785.1| CF1 alpha subunit of ATP synthase [Pycnococcus provasolii]
          Length = 505

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V+  G +  +      +  L + V  G+ V  +    ++ G  + 
Sbjct: 11  SIIRKQIESYTNEIEVENVGTVLQVGDGIARIYGL-ENVMAGELVEFE---DNSRGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I     + GRV+NAL +PIDG   +   D
Sbjct: 67  LEQDNVGAVLMGDGRSIQEGSSVRATGKIAQIPVGEKFLGRVVNALAEPIDGKGEI-AAD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S  P  + R+ V +  +TG+  ID   P+  GQR  +      GK+ + S    
Sbjct: 126 ESRLIESPAPGIVARRSVYEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVASDTIL 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +    +   +G++   V +             S++V  T+D    L+ +AP T  +
Sbjct: 186 NQKGNGVICVYVAIGQKASSVAQLRTTLEERGAMDYSIIVSQTADTPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +++ A + RE+A      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRHTLIIYDDLSKQASAYREMALLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG + L+  +   G  P ++   SVS
Sbjct: 306 NDELGGGSMTALPVVETQEGDVSAYIPTNVISITDGQVFLSGDIFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQVKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQSQLARGVRLRELLK 422

Query: 419 QSPSDLSS 426
           Q+ S   S
Sbjct: 423 QAQSSPLS 430


>gi|254413572|ref|ZP_05027342.1| ATP synthase F1, alpha subunit [Microcoleus chthonoplastes PCC
           7420]
 gi|196179679|gb|EDX74673.1| ATP synthase F1, alpha subunit [Microcoleus chthonoplastes PCC
           7420]
          Length = 505

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 107/436 (24%), Positives = 191/436 (43%), Gaps = 17/436 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      V  L Q    G+ V  +      +G  + 
Sbjct: 11  SIIRQQIEQYDQEVKVSNVGTVLQVGDGIARVYGLDQ-CMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   G+  ++       GRV++AL +PIDG   +  G+
Sbjct: 67  LEEDNVGVVLMGEGLDIQEGSSVKATGKIAQVPVGEALIGRVVDALARPIDGKGEIQSGE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 SRL-IESSAPGIIARRSVYEPLQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + +     +   VG++   V + ++          +V+V A + +   L+ +AP T  +
Sbjct: 186 NQKEEDVICVYVAVGQKASTVVQVVDALEERGALDYTVIVAANASDPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++P  SVS
Sbjct: 306 NDDLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINPGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F++ +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAIKKVAGKLKLDLAQFDDLQ---AFAQFASDLDKATQDQLSRGVRLRELLK 422

Query: 419 QSPSDLSSEDVFQEIT 434
           Q     S   V++++ 
Sbjct: 423 QPQ--YSPLAVYEQVA 436


>gi|291520262|emb|CBK75483.1| ATP synthase F1 subcomplex alpha subunit [Butyrivibrio fibrisolvens
           16/4]
          Length = 501

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 177/432 (40%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K    Q      G +  +      +  L Q    G+ +   G  
Sbjct: 1   MNLKPEEISSVIKEQMKRYAAQLDVADVGTVIQVADGIARIHGL-QNAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G  + I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGCVLLGNDKNINEGDQVKTTGRVVEVPVGNAMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIESTKFR-PIERVASGVISRKSVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++          + VV AT+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVKCIYVAIGQKASTVAALVKTLEEYGAMAWTTVVAATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I E +   G++VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAIGEEWMENGEDVLIIYDDLSKHATAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L       G  P
Sbjct: 296 RLLERAARLSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEAFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+ + +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AVNAGLSVSRVGGSAQIKAMKKIAAPIRVELAQYRE---LAAFAQFGSELDADTAEKLAQ 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GERIKEMLKQPQ 424


>gi|317185323|gb|ADV15988.1| ATP synthase F1 subunit alpha [Aragoa abietina]
          Length = 424

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 174/413 (42%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESDTLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 405


>gi|315641268|ref|ZP_07896345.1| ATP synthase F1 sector alpha subunit [Enterococcus italicus DSM
           15952]
 gi|315483035|gb|EFU73554.1| ATP synthase F1 sector alpha subunit [Enterococcus italicus DSM
           15952]
          Length = 519

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 108/430 (25%), Positives = 177/430 (41%), Gaps = 19/430 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L ++  KN      V + G ++ +         L +    G+ +     +
Sbjct: 1   MAIKAEEISALIKEQIKNYKNELSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PID
Sbjct: 60  ---YGMAQNLESNDVGIIILGEFESIREGDKVKRTGKIMEVPVGEALIGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK
Sbjct: 117 GLGEI-KTDKTRPVEAAAPGVMQRKSVHEPMQTGLKAIDALVPIGRGQRELVIGDRKTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           +++      +        I   +G++   VR  +E       L  ++VV A + +   + 
Sbjct: 176 TSIAIDAIINQKGQDMICIYVAIGQKDSTVRTQVETLRKFGALDYTIVVSAGASQPAPML 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   +  F E         +   +D      +++
Sbjct: 356 AVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDAATQAKLNR 412

Query: 410 VPIIYDFLKQ 419
                + LKQ
Sbjct: 413 GRRTVEILKQ 422


>gi|94317180|gb|ABF14768.1| ATP1 [Erodium pelargoniflorum]
          Length = 424

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   EI  
Sbjct: 1   GRVLSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTEIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGLPIDGKGALNDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNERATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFSQFGSDLDAATQALLNRGARLTEVLKQPQ 405


>gi|94317182|gb|ABF14769.1| ATP1 [Sarcocaulon vanderietiae]
          Length = 424

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 174/413 (42%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   EI  
Sbjct: 1   GRVLSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTEIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGLPIDGKGALNDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNERATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 405


>gi|55824792|gb|AAV66478.1| F1-ATPase alpha subunit [Humbertia madagascariensis]
          Length = 430

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|158259937|dbj|BAF82146.1| unnamed protein product [Homo sapiens]
 gi|193787398|dbj|BAG52604.1| unnamed protein product [Homo sapiens]
          Length = 503

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 20  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 75

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 76  KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 134

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 135 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 194

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 195 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 254

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 255 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 314

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 315 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 374

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 375 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 425


>gi|77462848|ref|YP_352352.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides 2.4.1]
 gi|126461741|ref|YP_001042855.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides ATCC
           17029]
 gi|221638718|ref|YP_002524980.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides KD131]
 gi|332557739|ref|ZP_08412061.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides WS8N]
 gi|124007208|sp|Q3J433|ATPA_RHOS4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358147|sp|A3PIB7|ATPA1_RHOS1 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|254808111|sp|B9KPI6|ATPA_RHOSK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|77387266|gb|ABA78451.1| F0F1-type ATP synthase alpha subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|126103405|gb|ABN76083.1| ATP synthase F1, alpha subunit [Rhodobacter sphaeroides ATCC 17029]
 gi|221159499|gb|ACM00479.1| ATP synthase subunit alpha [Rhodobacter sphaeroides KD131]
 gi|332275451|gb|EGJ20766.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides WS8N]
          Length = 512

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 100/437 (22%), Positives = 180/437 (41%), Gaps = 30/437 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      V  L   V  G+ V   G      G
Sbjct: 12  LKEQIKNFGQQAE------VAEVGRVLSVGDGIARVHGL-DNVQAGEMVEFPGG---IRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + + +D V +   G    I  GD V         P      GRV++ LG PIDG   +
Sbjct: 62  MALNLEVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVDGLGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 122 AATERRVA-DVKAPGIIPRKGVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAIAL 180

Query: 180 MFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
               +                  I   +G++   V + ++       +  ++VV AT+ +
Sbjct: 181 DTILNQKSYNEAAGDDESKKLYCIYVAIGQKRSTVAQLVKKLEETGAIDYTLVVAATASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    YP  V
Sbjct: 241 PAPMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER     K+ G  ++TA+  +   G + +  I  +V SI DG I L   L  
Sbjct: 301 FYLHSRLLERSAKLNKDHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D    
Sbjct: 361 QGIRPAVNTGLSVSRVGSSAQTDAMKSVAGPVKLELAQYRE---MAAFAQFGSDLDAATQ 417

Query: 405 KAVHQVPIIYDFLKQSP 421
           + +++   + + +KQ  
Sbjct: 418 QLLNRGARLTELMKQPQ 434


>gi|113475840|ref|YP_721901.1| F0F1 ATP synthase subunit alpha [Trichodesmium erythraeum IMS101]
 gi|123160854|sp|Q112Z6|ATPA_TRIEI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110166888|gb|ABG51428.1| ATP synthase F1, alpha subunit [Trichodesmium erythraeum IMS101]
          Length = 505

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 106/428 (24%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + +    E Y +++ V   G +  +      V  L + V  G+ V         +G    
Sbjct: 11  QIIRDQIEQYEQDVKVSNVGTVLQVGDGIARVYGLDK-VMAGELVEFADG---TVGIAQN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G EI  G  V   GR  ++       GRV++ LG+PIDG   +   D
Sbjct: 67  LEEDNVGAVLMGEGREIQEGSAVTATGRIAQVPVGDALVGRVVDGLGRPIDGKGEMKTTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-LESPAPGIIDRRSVYEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           +V+V A + +   L+ +AP T  T
Sbjct: 186 NQKGEDVICVYVAIGQKASTVAQVVGTLEEKGALDYTVIVAANASDPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAQAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P V+   SVS
Sbjct: 306 NDKLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGFRPAVNAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAIKKVAGKIKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREILK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQNSPRS 430


>gi|1827809|pdb|1COW|A Chain A, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827810|pdb|1COW|B Chain B, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827811|pdb|1COW|C Chain C, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1942368|pdb|1EFR|A Chain A, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942369|pdb|1EFR|B Chain B, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942370|pdb|1EFR|C Chain C, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
          Length = 510

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 27  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 82

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 83  KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 142 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 201

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 202 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 262 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 322 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 381

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 382 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 432


>gi|1943080|pdb|1BMF|A Chain A, Bovine Mitochondrial F1-Atpase
 gi|1943081|pdb|1BMF|B Chain B, Bovine Mitochondrial F1-Atpase
 gi|1943082|pdb|1BMF|C Chain C, Bovine Mitochondrial F1-Atpase
 gi|3660248|pdb|1NBM|A Chain A, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|3660249|pdb|1NBM|B Chain B, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|3660250|pdb|1NBM|C Chain C, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|6573680|pdb|1QO1|A Chain A, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573681|pdb|1QO1|B Chain B, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573682|pdb|1QO1|C Chain C, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|9256938|pdb|1E1Q|A Chain A, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256939|pdb|1E1Q|B Chain B, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256940|pdb|1E1Q|C Chain C, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256945|pdb|1E1R|A Chain A, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256946|pdb|1E1R|B Chain B, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256947|pdb|1E1R|C Chain C, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|11514056|pdb|1E79|A Chain A, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|11514057|pdb|1E79|B Chain B, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|11514058|pdb|1E79|C Chain C, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|14278504|pdb|1H8H|A Chain A, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278505|pdb|1H8H|B Chain B, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278506|pdb|1H8H|C Chain C, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|15825702|pdb|1H8E|A Chain A, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825703|pdb|1H8E|B Chain B, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825704|pdb|1H8E|C Chain C, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|33357741|pdb|1OHH|A Chain A, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|33357743|pdb|1OHH|C Chain C, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|51247969|pdb|1W0J|A Chain A, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247970|pdb|1W0J|B Chain B, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247971|pdb|1W0J|C Chain C, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247976|pdb|1W0K|A Chain A, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247977|pdb|1W0K|B Chain B, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247978|pdb|1W0K|C Chain C, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|109157330|pdb|2CK3|A Chain A, Azide Inhibited Bovine F1-Atpase
 gi|109157331|pdb|2CK3|B Chain B, Azide Inhibited Bovine F1-Atpase
 gi|109157332|pdb|2CK3|C Chain C, Azide Inhibited Bovine F1-Atpase
 gi|145579791|pdb|2JDI|A Chain A, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579792|pdb|2JDI|B Chain B, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579793|pdb|2JDI|C Chain C, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|268612198|pdb|2WSS|A Chain A, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612199|pdb|2WSS|B Chain B, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612200|pdb|2WSS|C Chain C, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612207|pdb|2WSS|J Chain J, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612208|pdb|2WSS|K Chain K, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612209|pdb|2WSS|L Chain L, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
          Length = 510

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 27  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 82

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 83  KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 142 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 201

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 202 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 262 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 322 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 381

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 382 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 432


>gi|149072066|ref|YP_001293543.1| ATP synthase CF1 subunit a [Rhodomonas salina]
 gi|190358196|sp|A6MVW4|ATPA_RHDSA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134303017|gb|ABO70821.1| ATP synthase CF1 subunit a [Rhodomonas salina]
          Length = 502

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y + + V   G +  I      V  L Q V  G+ +  +    + +G  + 
Sbjct: 11  SIIRQQIDKYDQGVQVANVGTVLQIGDGIARVYGLDQ-VMAGELLEFE---DETIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  ++     + GRV+N+LG PIDG   +   D
Sbjct: 67  LESDNVGVVLMGEGRAILEGSSVKATGKIAQVPVGDGYLGRVVNSLGAPIDGKGDISSSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      
Sbjct: 127 TRL-IESAAPGIISRKSVCEPIQTGITAIDSMIPIGRGQRELIIGDRQTGKTSVAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +           +V+V A +DE   L+ +AP T   
Sbjct: 186 NQKTEDVVCVYVAIGQKAASVASIVTQLEEKGALDYTVIVAANADEPATLQYIAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    +P  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLIIYDDLSKQASAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATRNQLARGQRLREILK 422

Query: 419 QSPSDLSSED 428
           Q  S   S +
Sbjct: 423 QPASSPISVE 432


>gi|290490192|gb|ADD31503.1| ATP synthase CF1 alpha subunit protein [Bulnesia arborea]
          Length = 507

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +  G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SKNVGVVLMSDGLMIQEGSSVKSTGRIAQIPVSEAYLGRVLNALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIVSRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGENVICVYVAIGQKASSVAQVVTTLQEKGAMEYTIVVAEPADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER     S
Sbjct: 248 EYFMYRKRHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNS 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIDVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D    K + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---SFAQFASDLDKTTQKQLARGRRLRELLKQS 424

Query: 421 PSDLSSED 428
            SD    +
Sbjct: 425 QSDPLPVE 432


>gi|302874592|ref|YP_003843225.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Clostridium cellulovorans 743B]
 gi|307690797|ref|ZP_07633243.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Clostridium cellulovorans 743B]
 gi|302577449|gb|ADL51461.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Clostridium cellulovorans 743B]
          Length = 435

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 247/419 (58%), Gaps = 10/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +  +  +   V  +S    +G+   ++  +  +   +V+    D + + P+G    I+
Sbjct: 23  GKVKKVIGLTIEVEGVS--ASVGEVCLIYNTQGKEIHCEVVGFKSDDIILMPLGELVGIA 80

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    ++ S    G++I+ LG+P+D   S+ +G++   + +  P  + R+R+
Sbjct: 81  PGCRVVATGIPLSVNCSYDLLGKIIDGLGRPLD-KSSIPQGEM-YPLDTNPPDPLKRRRI 138

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++   TG+R ID F     GQR+G+FAGSG+GKSTLL M AR    D  +I+L+GERGRE
Sbjct: 139 KEILPTGVRAIDGFLTCGEGQRVGIFAGSGVGKSTLLGMIAREAQADINVIALIGERGRE 198

Query: 202 VREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V +FI +D   + +K+S+VV ATSD+  ++R     TA  IAEYF  +G  V+L++DS+T
Sbjct: 199 VLDFIEKDLGEEGMKRSIVVCATSDQPALVRLKGAFTATAIAEYFRDQGKKVILMMDSVT 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + RE+    GE P  +GY  SVF+ LP+L+ER G SEK  G+ITA  +VLVDGD+ 
Sbjct: 259 RFAMAQREVGLAVGEPPATKGYTPSVFAMLPKLMERSGMSEK--GSITAFYTVLVDGDDF 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           N+PIAD+VR ILDGHIVL+R+LA +  +P +D L+S+SRL  +    + KK  S    L+
Sbjct: 317 NEPIADAVRGILDGHIVLSRALAAQNHFPAIDVLSSISRLMSEIAEEEHKKSASLARDLL 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
             ++ + D+  IG Y  G +  +D A+     I  FLKQ   + S+ ED    + K  +
Sbjct: 377 ATYKNSEDLINIGAYVSGSNKKIDMAIFHNEKINLFLKQQVKEKSAFEDSIDNLKKMFK 435


>gi|94502565|ref|YP_588408.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|94502566|ref|YP_588421.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|114151558|ref|YP_740361.1| ATPase subunit 1 [Zea perennis]
 gi|114151591|ref|YP_740440.1| ATPase subunit 1 [Zea luxurians]
 gi|114151624|ref|YP_740394.1| ATPase subunit 1 [Zea mays subsp. parviglumis]
 gi|114405|sp|P05494|ATPAM_MAIZE RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|13901|emb|CAA77319.1| unnamed protein product [Zea mays]
 gi|897619|gb|AAA70269.1| F1-ATPase alpha subunit [Zea mays]
 gi|40795004|gb|AAR91048.1| ATPase subunit 1 [Zea mays]
 gi|40795005|gb|AAR91049.1| ATPase subunit 1 [Zea mays]
 gi|93116034|gb|ABE98667.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|93116078|gb|ABE98710.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|93116123|gb|ABE98754.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|102567892|gb|ABF70809.1| ATPase subunit 1 [Zea perennis]
 gi|102567957|gb|ABF70841.1| ATPase subunit 1 [Zea mays subsp. parviglumis]
 gi|102579627|gb|ABF70907.1| ATPase subunit 1 [Zea mays subsp. mays]
 gi|110287587|gb|ABG65633.1| ATPase subunit 1 [Zea luxurians]
 gi|224968|prf||1204280A ATPase alpha,F1
          Length = 508

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 179/431 (41%), Gaps = 23/431 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +++   Y+   V + G + S+      V  L++ +  G+ V      S   G  + +  +
Sbjct: 16  SRMINFYTNLKVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENE 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L   +    
Sbjct: 72  NVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRR 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 131 VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQ 190

Query: 188 D-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     N  + S++V AT+ +   L+ +AP
Sbjct: 191 MNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSMLVAATASDPAPLQFLAP 250

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 251 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 310

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 311 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 370

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  S    + ++ E   +     +   +D      +++   +
Sbjct: 371 GLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARL 427

Query: 414 YDFLKQSPSDL 424
            +  KQ   + 
Sbjct: 428 TEVPKQPQYEP 438


>gi|149908454|ref|ZP_01897117.1| flagellum-specific ATP synthase [Moritella sp. PE36]
 gi|149808617|gb|EDM68552.1| flagellum-specific ATP synthase [Moritella sp. PE36]
          Length = 445

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 155/439 (35%), Positives = 239/439 (54%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M + L  L QL  D   +     G ++ +     T+  +     +G     +  N     
Sbjct: 1   MTELLSRLQQLKTDALASKPTVAGKLTRVVG--LTLEAVGCRAAIGSLCSVETDNGLMDA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V      + I       GRV++ +GKPIDG   +
Sbjct: 59  EVVGFDGDKLFLMPSEQVIGIIPGAKVTPLNETQGIPVGMELLGRVLDGVGKPIDGKGEI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G  +    +K    + R+++ K    G++ I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 119 ITGQTT-SFTAKRINPLARKKISKPLDVGVKAINAMLTVGQGQRMGLFAGSGVGKSVLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIE+ LG+  L +SVVV A +D SP++R     T+
Sbjct: 178 MMTRGSTADVVVVGLIGERGREVKEFIEEILGEEGLARSVVVAAPADSSPLMRLKGCETS 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + IAEYF  +G NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER G
Sbjct: 238 LAIAEYFRDQGLNVLLLMDSLTRFAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R L + G YP +D   S+S
Sbjct: 298 NGSDEQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSRELTDAGHYPAIDIEKSIS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +   +            +++ +D+  IG Y  G D  +D+A+   P +  FL+
Sbjct: 358 RVMPMVTTDFHQAAARGFKQAYSLYQQNKDLVAIGAYSKGSDAKIDRAIRLKPAMDQFLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   ++      +E+   +
Sbjct: 418 QGMKEVIPFSQCEEMLAAI 436


>gi|114762053|ref|ZP_01441521.1| F0F1 ATP synthase subunit alpha [Pelagibaca bermudensis HTCC2601]
 gi|114545077|gb|EAU48080.1| F0F1 ATP synthase subunit alpha [Roseovarius sp. HTCC2601]
          Length = 512

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 183/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVHGL-DSVKAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V I   G   +I  GD+V         P      GRV++ALG PID
Sbjct: 59  --IMGMALNLERDNVGIVIFGSDRDIKEGDVVKRTNSIVDVPAGPGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIEAAERRVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +      +                  +   VG++   V + ++       +  S+VV 
Sbjct: 176 TAIALDAILNQKSYNDAAGDDDSKKLYCVYVAVGQKRSTVAQLVKRLEASGAIDYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AE+F   G + L+I D +++ A S R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEHFRDNGKHALIIYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G  ++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFFQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +++   + + +KQ      +
Sbjct: 413 DAATQKLLNRGARLTELMKQPQYSPLT 439


>gi|56477131|ref|YP_158720.1| F0F1 ATP synthase subunit alpha [Aromatoleum aromaticum EbN1]
 gi|81357644|sp|Q5P4E4|ATPA_AZOSE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56313174|emb|CAI07819.1| F1-ATP synthase, alpha subunit [Aromatoleum aromaticum EbN1]
          Length = 512

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 190/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL         G + S+T     V  L+  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKSRIQNLQLAATSRNEGTVVSVTDGITRVHGLAD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHITEGDPVKATGRILEVPVGPELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + RQ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTDKIEKVAPGVIWRQSVSQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +           ++VV AT+ ES  ++
Sbjct: 176 TAVAVDAIINQKGQDMFCVYVAIGQKASTIANVVRKLEEHGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYSGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSADHVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +  L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 DTDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ      S
Sbjct: 413 LDDATRKQLERGRRVTELMKQPQYAPLS 440


>gi|222529415|ref|YP_002573297.1| ATP synthase F1 subunit alpha [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456262|gb|ACM60524.1| ATP synthase F1, alpha subunit [Caldicellulosiruptor bescii DSM
           6725]
          Length = 507

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 170/423 (40%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y K +     G +         +  L      G+ +          G  + 
Sbjct: 13  SIIKEQIKNYEKKIDTSDVGVVIMSGDGIARIHGL-DNCMAGELLEFPNG---VYGMALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  +EI  G +V   GR   +       GRV+NALG+PIDG   +    
Sbjct: 69  LEEDNVGCVILGNDKEIKEGTIVKRTGRVVEVPVGEELLGRVVNALGQPIDGLGPINAKK 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               +    P  + R+ V    +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 129 FR-PVERIAPGVIEREPVNTPLQTGIMAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V + +           ++VV AT+ +S  L+ +AP     
Sbjct: 188 NQKDQGVYCIYVAIGQKASTVAQIVNTLKEYGAMDYTIVVSATASDSAPLQFLAPYAGCA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G + L+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMESGKDALIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NAQRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFYAGVRPAINAGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  KA +   KK+   L   + ++ E         +   +D    + + Q   I + LK
Sbjct: 368 RVGGKAQTKAMKKVAGRLRLDLAQYRELE---AFAQFGSELDKSTRERLAQGQRIVETLK 424

Query: 419 QSP 421
           Q  
Sbjct: 425 QPQ 427


>gi|187763104|ref|YP_001876579.1| ATP synthase CF1 alpha subunit [Welwitschia mirabilis]
 gi|254808123|sp|B2Y1W2|ATPA_WELMI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|163311634|gb|ABY26792.1| ATP synthase CF1 alpha subunit [Welwitschia mirabilis]
 gi|220983457|dbj|BAH11226.1| ATP synthase CF1 alpha chain [Welwitschia mirabilis]
          Length = 507

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + VV  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  SIIREQIEQYNSEVQVVNMGTVLQVGDGIARIHGL-REVMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   G+  +I  S  + GR++NAL +P+DG   +   +
Sbjct: 67  LEAQNVGVVLMGDGLTIKEGSSVKTTGKIAQIPVSDAFLGRIVNALAQPVDGRGPISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIVSRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   + + ++          ++VVV  +D    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQKASSIAQIVKTLRECGAMEYTIVVVEPADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D   SVS
Sbjct: 306 NSQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAIDVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +  E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQIAELESFAR---FASDLDKGTRDNLARGQRLREMLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|57115577|gb|AAW33095.1| F1-ATPase alpha subunit [Ajuga reptans]
          Length = 424

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 174/413 (42%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGLPIDGRGALSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 405


>gi|399078|sp|Q02848|ATPA_ANTSP RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|14177|emb|CAA44984.1| atpA [Antithamnion sp.]
          Length = 505

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 182/422 (43%), Gaps = 13/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  ++Y + + V   G +  +      V  L + V  G+ +  + K    +G  + + 
Sbjct: 13  IRQQIDNYDQEVQVANIGTVLQVGDGIARVYGLDE-VMAGELLQFEDKEQ-TVGIALNLE 70

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G G  I  G  V   G+  +I     + GRV+N L KPID   +    D  
Sbjct: 71  SDNVGVVLMGDGRNILEGSSVKSTGKIAQIPVGDEFLGRVVNPLAKPIDAKGTPSVQDTR 130

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  + RQ V +  +TGI  ID   P+  GQR  +      GK+T+      + 
Sbjct: 131 L-IESYAPGIIGRQSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTTVALDTIINQ 189

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +         + ++VV A +DE   L+ +AP T   +A
Sbjct: 190 KGQDVVCVYVAIGQKASSVAQVVSTLEEKGALEYTIVVAANADEPATLQYIAPYTGAALA 249

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER     +
Sbjct: 250 EYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNQ 309

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 310 DLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRV 369

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ+
Sbjct: 370 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREILKQA 426

Query: 421 PS 422
            +
Sbjct: 427 QN 428


>gi|323149067|ref|YP_004222631.1| ATP synthase CF1 alpha subunit [Anthriscus cerefolium]
 gi|289645560|gb|ADD13623.1| ATP synthase CF1 alpha subunit [Anthriscus cerefolium]
          Length = 507

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 186/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E+Y++ + +V  G +  +      +  L + V  G+ V  Q      +G  + 
Sbjct: 11  KIIRERIEEYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFQEG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   G+  +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESTNVGVVLMGDGLLIQEGSSVKATGKIAQIPVSEAYLGRVVNALAKPIDGRGEITASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 YRL-IESAAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + ++        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEFFMYRKRHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 GSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|270291022|ref|ZP_06197245.1| ATP synthase F1, alpha subunit [Pediococcus acidilactici 7_4]
 gi|304385298|ref|ZP_07367643.1| ATP synthase F1 sector alpha subunit [Pediococcus acidilactici DSM
           20284]
 gi|270280418|gb|EFA26253.1| ATP synthase F1, alpha subunit [Pediococcus acidilactici 7_4]
 gi|304328505|gb|EFL95726.1| ATP synthase F1 sector alpha subunit [Pediococcus acidilactici DSM
           20284]
          Length = 505

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 179/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V + G ++ +         L   +  G+ +          G V  
Sbjct: 10  ALIKQQLENYQAELNVEETGTVTYVGDGIARAHGLDNALS-GELLEFSNG---VYGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  +EI  GD V   GR   +       GRV+N LG+P+DG  ++ K D
Sbjct: 66  LESNDVGIVIMGNYDEIHEGDTVKRTGRIMEVPVGDALIGRVVNPLGEPLDGKGAI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K P  M R+ V++  +TGI+ ID   P+  GQR  +      GK+ L   ++ 
Sbjct: 125 KTRPVEHKAPGVMQRKSVDQPLQTGIKAIDSLVPIGRGQRELIIGDRKTGKTALAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + +     I   +G++   VR  +E          ++VV A   E   L  +AP     
Sbjct: 185 NQKNEDMICIYVAIGQKESTVRTQVETLRRYGAMDYTIVVSAGPSEPAPLLYLAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG + L+      G  P +D   SVS
Sbjct: 305 SDDLGGGSMTALPFVETKAGDVSAYIPTNVISITDGQVFLDSDYFHSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVSGTLRLDLASYRELESFAQFG---SDLDKATQAKLARGRRTVEVLK 421

Query: 419 QSPS-DLSSED 428
           Q     L  ED
Sbjct: 422 QPLHKPLPVED 432


>gi|332374868|gb|AEE62575.1| unknown [Dendroctonus ponderosae]
          Length = 551

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 177/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +        +  K P  + R  
Sbjct: 124 KEGDIVKRTGAIVDVPVGDALLGRVVDALGNAIDGKGPV-ATKQRFRVGIKAPGIIPRIS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDADDEKKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +  +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 243 IYVAIGQKRSTVAQLLKRLTDTGAINYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEAHGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|168185930|ref|ZP_02620565.1| ATP synthase F1, alpha subunit [Clostridium botulinum C str.
           Eklund]
 gi|169296141|gb|EDS78274.1| ATP synthase F1, alpha subunit [Clostridium botulinum C str.
           Eklund]
          Length = 502

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   +  V  G I  I      V  + +    G+ +       D  G  + 
Sbjct: 10  SIIKKQIESYEHKIQTVDSGTIIQIGDGIARVYGI-EDCMEGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  GD+V   GR   +       GRV+NALG+P+DG   + K  
Sbjct: 66  LEQDNVGCVLLGPEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLDGKGPI-KCT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  + P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK+ +      
Sbjct: 125 QTRAIELEAPGVIERKSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGKTAIAIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V   +           ++VV +T+ +S  L+ ++P    +
Sbjct: 185 NQKGKDVKCIYVAIGQKQSTVAHIVNTLTEMGAMDYTIVVSSTASDSAPLQFLSPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG++VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MAEYFMLKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SDKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQKPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVSGTLRLELAQYRE---LAAFAQFGSDLDNSSKERLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QDQ 424


>gi|89112826|gb|ABD61025.1| ATPase alpha subunit [Spinacia oleracea]
          Length = 433

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 174/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 3   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 58

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R
Sbjct: 59  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIER 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------F 187
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 118 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESEI 177

Query: 188 DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   VG++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 178 LYCVYVAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 237

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 238 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A
Sbjct: 298 GSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAA 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 358 QLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 411


>gi|194033265|ref|YP_002000380.1| ATP synthase CF1 alpha subunit [Oedogonium cardiacum]
 gi|186968882|gb|ACC97205.1| CF1 alpha subunit of ATP synthase [Oedogonium cardiacum]
          Length = 502

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 106/445 (23%), Positives = 189/445 (42%), Gaps = 20/445 (4%)

Query: 1   MQKNLETLA----QLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++    Q  E Y++++ VV  G +  +      +  L + V  G+ +     +
Sbjct: 1   MKLRPEEISSIILQQIEQYNQDVQVVNFGNVFQVGDGIARIYGLEK-VMAGELLEF---D 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G  + +    V    +G G  I  G  V   G+  +I     + GRV++ L +PID
Sbjct: 57  DGTIGIALNLESKNVGAVLMGDGLNIKEGSKVRATGKVAQIPVGDAYLGRVVDPLARPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK
Sbjct: 117 GKGDIVTKETRL-IESPAPGIISRRSVYEPLQTGLVSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   V + +         + +++V A +D +  L+
Sbjct: 176 TAIALDTILNQKGKDVICVYVAIGQKASSVAQVVNSLRERGALEYTIIVAANADSAATLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T  T+AEYF   G + L+I D +++ A S RE++      P    YP  VF    
Sbjct: 236 YLSPYTGATLAEYFMYTGRHTLVIYDDLSKQAQSYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  V     + +  I  +V SI DG I L+  +   G  P
Sbjct: 296 RLLERAAKLNDSLGAGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E         +   +D      + +
Sbjct: 356 AINVGISVSRVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLAR 412

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEI 433
              + + LKQ   S LS ED    I
Sbjct: 413 GQRLRELLKQPQSSPLSLEDQVASI 437


>gi|170756099|ref|YP_001782276.1| flagellar protein export ATPase FliI [Clostridium botulinum B1 str.
           Okra]
 gi|169121311|gb|ACA45147.1| flagellar protein export ATPase FliI [Clostridium botulinum B1 str.
           Okra]
          Length = 438

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 169/438 (38%), Positives = 252/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           + E + +  +    N     G +  +  +   V  +  +V  G+  +   + +  +  +V
Sbjct: 7   DFEKIEKRIK--ETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +  
Sbjct: 63  VGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEG 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M 
Sbjct: 123 SPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL
Sbjct: 301 NK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDILSSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S + K        L+  ++ + D+  IG Y  G +  +D ++H    I  FLKQ 
Sbjct: 359 MSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMSIHYHESILSFLKQG 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +  S   F+E T  LQ
Sbjct: 419 IGEQHS---FEESTSILQ 433


>gi|221633213|ref|YP_002522438.1| ATP synthase F1 subunit alpha [Thermomicrobium roseum DSM 5159]
 gi|254808121|sp|B9L1H1|ATPA_THERP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|221155448|gb|ACM04575.1| ATP synthase F1, alpha subunit [Thermomicrobium roseum DSM 5159]
          Length = 510

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 176/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  E Y   +VV   GY+  +     TV  L + V   + V  +      LG    
Sbjct: 10  EILKQQIEQYGSRMVVTNVGYVVQVGDGIATVHGL-RDVMASELVEFENG---VLGIAFN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  GD V   GR   +       GRV+NALG+PIDG   +   D
Sbjct: 66  LQEDSVGVIILGDYTGIEEGDEVRATGRIASVPVGPALVGRVVNALGEPIDGKGPIN-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + RQ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRPIERIAPGVVMRQDVDTALQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++  +V + +         + ++VV AT+ +   L+ +AP     
Sbjct: 185 NQKGKGVICIYVAIGQKRAQVAQTVATLERYGAMEHTIVVAATASDPAALQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E     G + L++ D +++ A + R+++      P    YP  +F    RLLER    
Sbjct: 245 MGEEIMESGGHALIVYDDLSKHAWAYRQVSLLMRRPPGREAYPGDIFYLHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G +TA+  V    ++ +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 RDDLGGGTLTALPIVETQANDVSAYIPTNVISITDGQIYLEPDLFYAGIRPAINVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     +++   L   + +F E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGAAQIRAMRQVAGRLRLELAQFRE---LAAFAQFAAELDPATKRQIDRGLRLTEVLK 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QPQYEP 427


>gi|6561621|gb|AAF16965.1|AF197633_1 ATPase alpha subunit [Saururus cernuus]
          Length = 424

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 97/416 (23%), Positives = 175/416 (42%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDIAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD+V   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDIVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  SL   + ++ E   +     +   +D +    +H+   + + LKQ   + 
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAVTQALLHRGARLTEVLKQPQYEP 408


>gi|290490184|gb|ADD31499.1| ATP synthase CF1 alpha subunit protein [Phoradendron serotinum]
          Length = 511

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 182/421 (43%), Gaps = 14/421 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L +  E Y    +V  G +  +      +  L + V  G+ V  +  +   +G  + +  
Sbjct: 14  LRERIEQYRDVKIVNTGTVLKVGDGIARIHGLDE-VMAGELVEFEEGS---IGIALNLES 69

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V +  +G G  I  G  V   GR  +I  S  + GRVIN+L KPIDG   +   +  +
Sbjct: 70  NNVGVVLMGNGLMIQEGSSVKATGRIAQIPVSEDFLGRVINSLAKPIDGRGEISASESRL 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARS 184
            I S  P  ++R+ + +  +TG+  ID   P+  GQR  +      GK+ + +  +  + 
Sbjct: 130 -IESPAPGIISRRSIYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQ 188

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAE 243
           D     +   +G++   V + +  +      K ++VV  T+D    L+ +AP T   +AE
Sbjct: 189 DQNVICVYVAIGQKASSVAQVVTTFQESRASKYTIVVAETADSPATLQYLAPYTGAALAE 248

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER       
Sbjct: 249 YFMYREQHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSR 308

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+ 
Sbjct: 309 LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFHAGIRPAINVGISVSRVG 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++       + +F E         +   +D      + +   + + LKQS 
Sbjct: 369 SAAQIKAMKQVAGKSKLEVAQFAELE---AFVQFASDLDKGTQNQLARGQRLRELLKQSQ 425

Query: 422 S 422
           S
Sbjct: 426 S 426


>gi|157165459|ref|YP_001466343.1| F0F1 ATP synthase subunit alpha [Campylobacter concisus 13826]
 gi|166201655|sp|A7ZC35|ATPA_CAMC1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|112800110|gb|EAT97454.1| ATP synthase F1, alpha subunit [Campylobacter concisus 13826]
          Length = 505

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/438 (22%), Positives = 181/438 (41%), Gaps = 19/438 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++  +N      V + G + S+      V  L + V  G+ V  +    
Sbjct: 4   KIKADEISTIIKERIENFDLSVDVEETGKVISVADGVANVYGL-KNVMAGEMVEFESGEK 62

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +    V I  +G    I+ G  V    +  R+       GRV+N+LG+PID 
Sbjct: 63  ---GMALNLEESSVGIVILGKTSGITEGSSVKRLKKLLRVPVGDALIGRVVNSLGEPIDA 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +    +  K    M R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGPIEATESRF-VEEKAKGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +        I   +G++   V + ++          ++VV A + ++  L+ 
Sbjct: 179 TVAIDTIINQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMDYTIVVNAGASDAAALQY 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   VT+ EYF     + L+I D +++ A + RE++      P    YP  VF    R
Sbjct: 239 LAPYAGVTMGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSR 298

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERASKLNDALGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGIRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 359 INVGLSVSRVGGAAQIKAIKQVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLERG 415

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ P      +
Sbjct: 416 QKMVEVLKQPPYSPLPVE 433


>gi|78045988|ref|YP_362163.1| type III secretion system ATPase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325927683|ref|ZP_08188911.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           perforans 91-118]
 gi|462306|sp|P80153|HRPB6_XANEU RecName: Full=Probable ATP synthase hrpB6
 gi|398113|gb|AAA27605.1| AA: 163-179 mononucleotide binding box A; 193-207 magnesium binding
           domain; 244-256 mononucleotide binding box B
           [Xanthomonas campestris]
 gi|984883|gb|AAB08461.1| HrpB6 [Xanthomonas euvesicatoria]
 gi|78034418|emb|CAJ22063.1| HrcN protein [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|325541884|gb|EGD13398.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           perforans 91-118]
          Length = 442

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 165/418 (39%), Positives = 238/418 (56%), Gaps = 9/418 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIG 78
            + G +  +      V  +   V LG+    + ++   L   +V+  + D+  + P G  
Sbjct: 23  RRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDLALLAPFGEL 80

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR   +       GRV++ LG+P DG  ++   D  + I ++ P  M 
Sbjct: 81  IGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPIQAQAPDPMR 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D  +I L+GE
Sbjct: 140 RRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGE 199

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  +G  VLL++
Sbjct: 200 RGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMM 259

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+ITA  +VL +
Sbjct: 260 DSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGES--GSITAFYTVLAE 317

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +    D  +    L
Sbjct: 318 DDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPYDHSQAAGRL 377

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             L+ ++ E   +  +G YR G D + D+A+ ++  I DFL Q    LS+ +   E+ 
Sbjct: 378 RRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSAYENTLELL 435


>gi|307683599|dbj|BAJ19778.1| ATP synthase CF1 alpha chain [Picea morrisonicola]
          Length = 507

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 177/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA- 182
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIP 185

Query: 183 -RSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSP 421
           QS 
Sbjct: 423 QSQ 425


>gi|226510502|ref|NP_001141021.1| hypothetical protein LOC100273100 [Zea mays]
 gi|194702226|gb|ACF85197.1| unknown [Zea mays]
          Length = 552

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 182/428 (42%), Gaps = 22/428 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 68  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 123

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 124 VKEGETVKRTGEIVDVPVGPEMLGRVVDALGNPIDGKGPINTKEKRRA-QLKAPGILPRK 182

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ ID   P+  GQR  +      GK      T+L+    +D  D      
Sbjct: 183 SVNEPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVGLDTILNQKRWNDGQDEKKKLY 242

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T  +I E+F   
Sbjct: 243 CIYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGASIGEWFRDN 302

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 303 GKHSLVIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDKLGGGS 362

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 363 MTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 422

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ+  +   
Sbjct: 423 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQTQYNPYP 479

Query: 427 EDVFQEIT 434
            +    + 
Sbjct: 480 VNHMVPLI 487


>gi|300854211|ref|YP_003779195.1| flagellum-specific ATP synthase [Clostridium ljungdahlii DSM 13528]
 gi|300434326|gb|ADK14093.1| flagellum-specific ATP synthase [Clostridium ljungdahlii DSM 13528]
          Length = 435

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 169/439 (38%), Positives = 255/439 (58%), Gaps = 12/439 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQV 62
           N + L +  ++ + N   Q G +  +  +   V  +  +V  G+   ++  +NS    +V
Sbjct: 5   NFDRLNRKVKEATYNY--QEGIVKKVIGLTVEVEGIRAFV--GEVCHIYNEENSKISCEV 60

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  N   V + P+G    IS G  V        +  S    G+V++ LG P+DG  +   
Sbjct: 61  VGFNESNVILMPLGELIGISPGCRVVPERMPLNVRCSDELFGKVLDGLGNPLDG--AYIS 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
             +   + ++ P  + R+R+ +   TG+R ID F     GQRIG+FAGSG+GKST L M 
Sbjct: 119 SGVPYPLDTEPPDPLKRRRITEVIATGVRAIDGFLTCGQGQRIGIFAGSGVGKSTTLGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREV++FI +D   + +KKS++V ATSD+  ++R     TA  
Sbjct: 179 AKYAEADVNVIALIGERGREVKDFIEKDLGEEGMKKSIIVCATSDKPALVRLKGAFTATA 238

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 239 IAEYFRDKGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERAGTS 298

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D LAS+SRL
Sbjct: 299 D--IGSITAFYTVLVDGDDLNEPIADAVRGILDGHIVLSRTLANKNHYPAIDVLASISRL 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +D KK  S    ++  ++ + D+  IG Y  G    +DKAV     I  +L+Q 
Sbjct: 357 MSEIAESDHKKNASFARDMLSTYKNSEDLINIGAYVKGSSEKIDKAVACYDKIIAYLRQD 416

Query: 421 PSDLSS-EDVFQEITKKLQ 438
            ++ SS E+  +++ K  Q
Sbjct: 417 VNENSSFEESVEDLKKIFQ 435


>gi|288573027|ref|ZP_06391384.1| ATPase, FliI/YscN family [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288568768|gb|EFC90325.1| ATPase, FliI/YscN family [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 448

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 157/417 (37%), Positives = 235/417 (56%), Gaps = 9/417 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73
            ++LV   G ++ +  +   V      V +GD      +    +   +V+    D V + 
Sbjct: 20  QRDLVRVNGRVTKVVGLV--VESKGPDVRVGDLCDIRFRKGRKNLEAEVVGFRDDRVLLM 77

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G   +I  G  V   GR   ++  +   GR+++ LG+P+D    +G  +    + +  
Sbjct: 78  PLGELRDIGPGCEVVSMGRPLGVNVGSGLLGRILDGLGRPMDEKGPVGSSEF-YPLYATP 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + RQ + +    G+R +D    L  GQRIG+F+GSG+GKSTLL M AR+   +  +I
Sbjct: 137 PHPLRRQNISEPLPVGVRAVDGVLTLGRGQRIGIFSGSGVGKSTLLGMMARNTEAEINVI 196

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            LVGERGREVREFI  D   + LK+SV+VVATSD+ P++R  A  TA  +AEYF  +G +
Sbjct: 197 GLVGERGREVREFIERDLGPEGLKRSVLVVATSDQPPLVRLKAAFTATAVAEYFRDQGKD 256

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TR A++ RE+    GE P  RGY  SVF+ LPRLLER G     +G+IT + 
Sbjct: 257 VLLMMDSVTRVAYAQREVGLAVGEPPATRGYTPSVFALLPRLLERAGA--GTRGSITGIY 314

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+ N+P+ADSVR ILDGH+VL+R +A    YP +D L SVSR+           
Sbjct: 315 TVLVEGDDMNEPVADSVRGILDGHVVLSRKIAARNFYPCIDILNSVSRVMPSIVDKVHLD 374

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
               +  ++ R+ E  D+  IG Y  G +   D A+  +  +  FL+Q   + SS +
Sbjct: 375 GAGRIREVLARYAEAEDLIAIGAYHKGSNPRADWALDNLGDVEAFLRQGIGEASSFE 431


>gi|91087467|ref|XP_966334.1| PREDICTED: similar to AGAP005134-PA isoform 1 [Tribolium castaneum]
 gi|270010980|gb|EFA07428.1| hypothetical protein TcasGA2_TC008728 [Tribolium castaneum]
          Length = 551

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +        +  K P  + R  
Sbjct: 124 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPIN-TKQRFRVGIKAPGIIPRIS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDADDEKKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +  +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 243 IYVAIGQKRSTVAQILKRLTDTGAINYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDAHGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|6729934|pdb|1MAB|A Chain A, Rat Liver F1-Atpase
          Length = 510

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 27  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 82

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G   +   +  K P  + R  
Sbjct: 83  KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVG-SKIRRRVGLKAPGIIPRIS 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 142 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 201

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 202 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 262 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 322 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 381

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 382 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 432


>gi|332184763|gb|AEE27017.1| ATP synthase alpha chain [Francisella cf. novicida 3523]
          Length = 513

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 111/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLND-VAAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-TTDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + ++VV AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIVVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|310644379|ref|YP_003949138.1| proton-translocating atpase alpha subunit [Paenibacillus polymyxa
           SC2]
 gi|309249330|gb|ADO58897.1| Proton-translocating ATPase alpha subunit [Paenibacillus polymyxa
           SC2]
          Length = 504

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/400 (25%), Positives = 175/400 (43%), Gaps = 14/400 (3%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L + V  G+ V     ++  LG  + +    V +  +G   +I  G  V   
Sbjct: 36  DGIARVYGLEK-VMAGELVEF---DTGVLGLALNVEESNVGVVILGQFSDIREGGQVKRT 91

Query: 91  GRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G+   +       GRV+N LG+P+DG   +   +    + S+ P  M R+ V +  +TGI
Sbjct: 92  GQIMQVPVGEAMIGRVVNPLGQPVDGKGPIATTEFR-PVESQAPGVMARKSVHEPMQTGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIE 207
           + ID   P+  GQR  +      GK+++      +   +  K I   +G++   V + +E
Sbjct: 151 KAIDAMVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGNGMKCIYVAIGQKQSTVAQVVE 210

Query: 208 DYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                   + ++VV A++ E   L  +AP +   + EYF  KG++VL++ D +T+ A + 
Sbjct: 211 TLRRHGALEYTIVVTASASEPSPLLYIAPYSGCAMGEYFMYKGEHVLVVYDDLTKQASAY 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPI 324
           RE++      P    YP  VF    RLLER      E   G++TA+  +     + +  I
Sbjct: 271 RELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGGGSLTALPFIETQASDVSAYI 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L   L   G+ P ++   SVSR+   A     KK+  SL   + ++ 
Sbjct: 331 PTNVISITDGQIFLEADLFYAGQRPAINVGISVSRVGGSAQIKAMKKVAGSLRLDLAQYR 390

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           E +       +   +D      + +   + + LKQ  +  
Sbjct: 391 ELQ---AFSQFGSDLDKSTKARLDRGARMMEILKQGVNQP 427


>gi|93279422|pdb|2F43|A Chain A, Rat Liver F1-Atpase
          Length = 510

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 27  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 82

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G   +   +  K P  + R  
Sbjct: 83  KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVG-SKIRRRVGLKAPGIIPRIS 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 142 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 201

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 202 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 262 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 322 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 381

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 382 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 432


>gi|114531|sp|P09219|ATPA_BACP3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|77452|pir||S01401 H+-transporting two-sector ATPase (EC 3.6.3.14) alpha chain -
           thermophilic bacterium PS-3
 gi|2981976|pdb|1SKY|B Chain B, Crystal Structure Of The Nucleotide Free Alpha3beta3 Sub-
           Complex Of F1-Atpase From The Thermophilic Bacillus Ps3
 gi|45814|emb|CAA30652.1| unnamed protein product [Bacillus sp. PS3]
          Length = 502

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 175/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G  + 
Sbjct: 10  ALIKQQIENYESQIQVSDVGTVIQVGDGIARAHGL-DNVMSGEAVEFANA---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGETLIGRVVNPLGQPVDGLGPVETTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -TRPIESRAPGVMDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V   +E          ++VV A++ +   L  +AP   V 
Sbjct: 185 NQKDQNMICIYVAIGQKESTVATVVETLAKHGAPDYTIVVTASASQPAPLLFLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G +VL+++D +++ A + R+++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMIMGKHVLVVIDDLSKQAAAYRQLSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      V +     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLAAYRELE---AFAQFGSDLDKATQANVARGARTVEVLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QDLHQP 427


>gi|288962371|ref|YP_003452666.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
 gi|288914637|dbj|BAI76122.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
          Length = 445

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 166/426 (38%), Positives = 254/426 (59%), Gaps = 4/426 (0%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRI 65
           + QL  D  +     + G +++++ +   V  + + + +G   + + ++   +  +V+  
Sbjct: 5   IDQLIRDIDEIPDCSRYGRVTAVSGLMVEVGGIEKELSVGGRCIVETRDRRRVPCEVVGF 64

Query: 66  NLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
                   P G  + + LG   +    +  I P+  W GRV+NALG+P+DG   L KG  
Sbjct: 65  RQGRALAMPFGALDGVGLGCRALVAGDQAMIYPTDAWLGRVVNALGEPVDGKGPLPKGPQ 124

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              I +  P A +R RV +    GIR I+ F   C GQR+G+FAGSG+GKS+++SM AR 
Sbjct: 125 GTPIRNTPPNAHSRARVGEKLDLGIRAINAFLTCCRGQRMGIFAGSGVGKSSVMSMLARF 184

Query: 185 DCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              +  +I L+GERGRE++EFI +    + L +SVVV ATSDE+P++RK A    + +AE
Sbjct: 185 SAAEVAVIGLIGERGRELQEFITEDLGEEGLARSVVVCATSDEAPLMRKQAAYMTLAVAE 244

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           +F  +G +VL ++DS+TRFA + REI  ++GE P  +GYP +VF+ELPRLLER GP    
Sbjct: 245 HFRDQGRDVLCMMDSVTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAGPGVVG 304

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G IT + +VLVDGD+HN+PIAD+VR ILDGHIV+ R + E GRYP ++ L SVSR    
Sbjct: 305 SGTITGLFTVLVDGDDHNEPIADAVRGILDGHIVMERQIGERGRYPAINILRSVSRTMPG 364

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             +A+E +LV     L+  ++   ++  +G YR G D  +D+A+H  P +  FLKQ   +
Sbjct: 365 CNTANENELVGHARRLLSSYDNMAEMIRLGAYRRGTDPQVDEAIHFQPALEAFLKQGKRE 424

Query: 424 LSSEDV 429
            +  + 
Sbjct: 425 ATDLET 430


>gi|254419007|ref|ZP_05032731.1| ATP synthase F1, alpha subunit [Brevundimonas sp. BAL3]
 gi|196185184|gb|EDX80160.1| ATP synthase F1, alpha subunit [Brevundimonas sp. BAL3]
          Length = 510

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 177/440 (40%), Gaps = 26/440 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +    N      V   G + S+      +  L   V  G+ V      
Sbjct: 1   MDIRAAEISAILKSQIANFGVEADVSDVGSVLSVGDGIARIHGL-DNVQAGEMVEFTKAG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V     G    I+ GD V   G    +       GRV+N LG+PID
Sbjct: 60  --VKGMALNLERDNVGAVIFGADAAIAEGDDVRRLGEIVDVPVGKGLLGRVVNPLGEPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +     +GK
Sbjct: 118 GKGPIQFTE-RRRVDVKAPGIIPRKSVHEPMQTGLKAIDTLIPVGRGQRELIIGDRQVGK 176

Query: 175 STLLSMFARSDCFD----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +      +                I   +G++   V + ++          ++VV AT
Sbjct: 177 TAVAIDTILNQKNVNKTDDESAKLYCIYVAIGQKRSTVAQIVKTLEEAGAMEYTIVVAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP +   + EYF   G + L++ D +++ A + R+++      P    YP
Sbjct: 237 ASEPAPLQFLAPFSGTAMGEYFRDNGMHGLIVYDDLSKQAVAYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++ G+   TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERSAKLNEDYGSGSLTALPLIETQANDVSAYIPTNVISITDGQIFLESD 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A +   KK+  ++   + ++ E   +     +   +D 
Sbjct: 357 LFYQGIRPAVNVGISVSRVGSSAQTKAMKKVAGTIKGELAQYRE---MAAFAKFGSDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + LKQ  
Sbjct: 414 STQKLLARGARLTELLKQPQ 433


>gi|34500899|ref|NP_904084.1| ATP synthase CF1 alpha subunit [Amborella trichopoda]
 gi|75294668|sp|Q70XV0|ATPA_AMBTC RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|34481614|emb|CAD56281.1| ATPase alpha subunit [Amborella trichopoda]
          Length = 507

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 182/421 (43%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G    + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFE---ESTIGIAPNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQEQGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|71027907|ref|XP_763597.1| ATP synthase F1 subunit alpha [Theileria parva strain Muguga]
 gi|68350550|gb|EAN31314.1| ATP synthase F1, alpha chain, putative [Theileria parva]
          Length = 545

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/444 (22%), Positives = 189/444 (42%), Gaps = 27/444 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           + +   +++L +       S+  V   G++ ++      +  L + V  G+ V+    +S
Sbjct: 36  KVSPAEISKLLQTKIGGWDSQKDVRDVGHVINVGDGIARIYGL-KEVKAGELVMF---SS 91

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +  D + +   G    I  GD V    R   +       GRV++ALG+PIDG
Sbjct: 92  GVAGMALNLETDNIGVVIFGDDRNILEGDTVTRTNRILDVPVGPELLGRVVDALGRPIDG 151

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   + S  +    P  ++R+ V +   TG++ +D   P+  GQR  +      GK+
Sbjct: 152 KGDLVTKETSR-VEVPAPGIIDRRSVHEPMTTGMKCVDSLVPIGRGQRELIIGDRQTGKT 210

Query: 176 TLLSMFARSDCFD----------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
            L      +                I   +G++   V   ++     D LK ++VV AT+
Sbjct: 211 ALAIDTILNQRLVNEGLEENKRLYCIYVAIGQKRSTVARILKILEDNDALKYTIVVAATA 270

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP T  ++ E+F +   + ++I D +++ A + R+++      P    YP 
Sbjct: 271 SDPAPLQFLAPFTGCSMGEWFRNNKKHCVIIYDDLSKQATAYRQMSLLLRRPPGREAYPG 330

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            +F    RLLER       KG+   TA+  +     + +  I  +V SI DG I L   L
Sbjct: 331 DIFYLHSRLLERAAKMSDTKGSGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESEL 390

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A S   K++  ++   + +F E   I+    +   +D  
Sbjct: 391 FYKGIRPAINVGLSVSRVGSAAQSKAMKQVSGTMKLDLAQFRE---IQAFSQFGSDLDSS 447

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS 426
             + + +  ++ + LKQ      S
Sbjct: 448 TQQLLTRGTLLTELLKQKQYAPLS 471


>gi|156087883|ref|XP_001611348.1| ATP synthase F1, alpha subunit family protein [Babesia bovis]
 gi|154798602|gb|EDO07780.1| ATP synthase F1, alpha subunit family protein [Babesia bovis]
          Length = 544

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           + +   +++L +           VV  G++ ++      V  L + V +G+ VV    +S
Sbjct: 33  KISPAEMSKLLQSRIAGWEKQKDVVDVGHVINVGDGIARVYGL-KDVKMGELVVF---SS 88

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +  D V +   G    I  GD V    R   +       GRV++ALG PIDG
Sbjct: 89  GVSGMALNLETDNVGVVIFGDDRSILEGDNVSRTNRIIDVPVGPALLGRVVDALGNPIDG 148

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              + +      +    P  ++R+ V +   TGI+ +D   P+  GQR  +      GK 
Sbjct: 149 KGPV-ESTKRNRVEVPAPGIIDRRSVNEPMTTGIKCVDSLVPIGRGQRELIIGDRQTGKT 207

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    +D  D       +   +G++   V   ++     D LK + +V AT+
Sbjct: 208 ALAIDTILNQKELNDGKDEKDRVYCVYVAIGQKRSTVARIMKTLEDKDALKYTTIVAATA 267

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +S  L+ +AP     + E+F + G + ++I D +++ A + R+++      P    YP 
Sbjct: 268 SDSAPLQFLAPFAGCAMGEWFRNSGRHAVIIYDDLSKQATAYRQMSLLLRRPPGREAYPG 327

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            +F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 328 DIFYLHSRLLERAAKLSDKNGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESEL 387

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  ++   + +F E   +     +   +D  
Sbjct: 388 FYKGIRPAINVGLSVSRVGSAAQIKAMKQVSGTMKLDLAQFRE---VAAFAQFGSDLDAA 444

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             K + +  ++ + LKQ  
Sbjct: 445 TQKLLTRGTLLTELLKQPQ 463


>gi|289066833|ref|YP_003434351.1| ATP synthase CF1 alpha subunit [Vigna radiata]
 gi|259020020|gb|ACV90218.1| ATP synthase CF1 alpha subunit [Vigna radiata]
          Length = 510

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  QIIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  +  RVINAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLSRVINALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     VG++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAVGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|311695214|gb|ADP98087.1| flagellum-specific ATP synthase FliI [marine bacterium HP15]
          Length = 464

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 156/418 (37%), Positives = 237/418 (56%), Gaps = 9/418 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDIVYICPVGIGEEI 81
            G ++ +     T+ C+   + +GD  V  G+N  +   +V+    D VY+ P+   E +
Sbjct: 25  SGRLTRMVG--LTLECVGCPMVVGDRCVIFGQNTGNVEAEVVGFEDDRVYLMPLTAIEGL 82

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V       R+       GRV++  G+P+DG   L + +  + +   +   +NR  
Sbjct: 83  KPGARVVPLSAASRVPVGPQLLGRVVDGSGEPLDGKGPL-QAEARVALTGDIINPLNRAP 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGR
Sbjct: 142 VRQSMDVGIRAINALMTVGQGQRLGLFAGSGVGKSMLLGMMTRFTDADITVVGLIGERGR 201

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFIED LG+  L +SVVV A +D+SP++R  A +    IAEY+  +G  VLL++DS+
Sbjct: 202 EVKEFIEDILGEEGLSRSVVVAAPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSL 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + REIA   GE P  +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+
Sbjct: 262 TRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDD 321

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             DPIAD+ R+ILDGHIVL+R LAEEG YP +D  AS+SR+  +    +          +
Sbjct: 322 QQDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFSRAQRFKQV 381

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             R+++ RD+  +G Y  G D   D A+  +  +  FL+Q  ++ +     +E   +L
Sbjct: 382 YSRYQQARDLISVGAYVKGSDPETDFAITHIGNMRQFLQQGLNESA---PLKESVDQL 436


>gi|326200266|gb|ADZ52305.1| ATP synthase CF1 alpha subunit [Asclepias syriaca]
          Length = 505

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 106/422 (25%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGSVLQVGDGIARIHGLDE-VMAGELVEFEEG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGKIAQIPVSDAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTALQEKGAMEYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKKVAGKLKLDLAQFVELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|322806989|emb|CBZ04559.1| flagellum-specific ATP synthase FliI [Clostridium botulinum H04402
           065]
          Length = 438

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 169/438 (38%), Positives = 251/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           + E + +  +    N     G +  +  +   V  +  +V  G+  +   + +  +  +V
Sbjct: 7   DFEKIEKRIK--ETNFNYMEGTVRKVIGLTVEVEGIKAFV--GEVCIIYNEKNQTIPCEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P+G    I+ G  V   G+   +  S    G+V++ LG P++G++ +  
Sbjct: 63  VGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLDGLGNPLEGEELMEG 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +++  S  P  M R+R++    TGI+ ID F  +  GQRIG+FAGSG+GKST L M 
Sbjct: 123 SPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIFAGSGVGKSTTLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D  +I+L+GERGREVR+FI +D   + LKKSV+V ATSD+  ++R     TA  
Sbjct: 181 AKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDKPALVRLKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER G S
Sbjct: 241 IAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAKLPRLMERSGMS 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+SVSRL
Sbjct: 301 NK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKNHYPAIDVLSSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S + K        L+  ++ + D+  IG Y    +  +D A+H    I  FLKQ 
Sbjct: 359 MSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKRSNPKVDMAIHYHESILSFLKQG 418

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +  S   F+E T  LQ
Sbjct: 419 IGEQHS---FEESTSILQ 433


>gi|290490214|gb|ADD31514.1| ATP synthase CF1 alpha subunit protein [Trochodendron aralioides]
          Length = 507

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   G   +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKARGIIAQIPVSEAYLGRVINALAKPIDGRGEIPASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|121720598|ref|YP_001001519.1| ATP synthase CF1 alpha subunit [Nuphar advena]
 gi|190358186|sp|A1XFU0|ATPA_NUPAD RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|84682189|gb|ABC60443.1| ATP synthase CF1 alpha subunit [Nuphar advena]
          Length = 507

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 185/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G    + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIAPNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEILASEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKPSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + D
Sbjct: 425 QSSPLAVD 432


>gi|240143393|ref|ZP_04741994.1| ATP synthase F1, alpha subunit [Roseburia intestinalis L1-82]
 gi|257204662|gb|EEV02947.1| ATP synthase F1, alpha subunit [Roseburia intestinalis L1-82]
 gi|291537136|emb|CBL10248.1| ATP synthase F1 subcomplex alpha subunit [Roseburia intestinalis
           M50/1]
 gi|291540376|emb|CBL13487.1| ATP synthase F1 subcomplex alpha subunit [Roseburia intestinalis
           XB6B4]
          Length = 502

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 99/435 (22%), Positives = 178/435 (40%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K    Q      G +  +      +  L      G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQIKRYAAQLEVADVGTVIQVADGIARIHGL-DNAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G    ++ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGAVLLGAQRNVNEGDTVKTTGRVVEVPVGDAMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +   +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETNKYRQIERVASGVISRKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++          + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVKCIYVAIGQKASTVAALVKTLEEFGAMSYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +   G++VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMENGEDVLVVYDDLSKHAAAYRTLSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARLSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+ + +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKIAAPIRVELAQYRE---LAAFAQFGSELDADTTEKLAQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I + LKQ     
Sbjct: 413 GARIREMLKQPQYQP 427


>gi|153953781|ref|YP_001394546.1| hypothetical protein CKL_1156 [Clostridium kluyveri DSM 555]
 gi|219854397|ref|YP_002471519.1| hypothetical protein CKR_1054 [Clostridium kluyveri NBRC 12016]
 gi|146346662|gb|EDK33198.1| FliI [Clostridium kluyveri DSM 555]
 gi|219568121|dbj|BAH06105.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 439

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 172/431 (39%), Positives = 252/431 (58%), Gaps = 11/431 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           +  N   L +  +    N   Q G +  +  +   V  +  +V  G+   V+  +N +  
Sbjct: 2   INLNFSELNRKVKV--ANFTYQEGIVKKVIGLTIEVEGIKAFV--GEVCNVYSEENGNIA 57

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+      V + P+G    IS G  V    R   +  S    G+V++ LG P+ G+D 
Sbjct: 58  CEVVGFKEKDVILMPLGELIGISPGCRVVPGRRPLSVKCSEELFGKVLDGLGNPL-GEDE 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +  G +  E+ ++ P  + R+R+++   TGIR ID F     GQRIG+FAGSG+GKST L
Sbjct: 117 ISSG-VLYELDAEPPDPLKRKRIKQVISTGIRAIDGFLTCGEGQRIGIFAGSGVGKSTTL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREVR+FI +D   + LKKS++V ATSD+  ++R     T
Sbjct: 176 GMIARYAEADVNVIALIGERGREVRDFIEKDLGEEGLKKSIIVCATSDKPALVRLKGAFT 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  KG  V+L++DS+TRFA + REI    GE P  +GY  SVF++LPRL+ER 
Sbjct: 236 ATAIAEYFRDKGKKVILMMDSVTRFAMAQREIGLAVGEPPATKGYTPSVFAKLPRLMERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L+S+
Sbjct: 296 GMSDK--GSITAFYTVLVDGDDLNEPIADAVRGILDGHIVLSRSLANKNHYPAIDVLSSI 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL  +      KK  S    ++  ++ + D+  IG Y  G +  +D A++    I ++L
Sbjct: 354 SRLMSEITEKSHKKSASFARDMLSVYKNSEDLINIGAYIRGNNPNIDMAINYYDGIINYL 413

Query: 418 KQSPSDLSSED 428
           KQ+  + SS D
Sbjct: 414 KQNMDEYSSFD 424


>gi|289523571|ref|ZP_06440425.1| flagellar protein export ATPase FliI [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503263|gb|EFD24427.1| flagellar protein export ATPase FliI [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 442

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 166/440 (37%), Positives = 245/440 (55%), Gaps = 14/440 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
           +  L  L    ++     +   G I+   ++   +      V +GD    + ++S +   
Sbjct: 7   ENMLSALETRLDNLD--FIRLNGIIAK--AIGIVIESKGPDVRVGDLCEIRYRDSSSSLC 62

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N D V + P+G   +I  G  V   G +  +       GRV+N LG+PID    
Sbjct: 63  AEVVGFNEDRVLLMPLGELADIGPGCDVVAVGQKLGVRVGPGLLGRVLNGLGEPIDDKGP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +  GD+   + ++ P  + R+ +      G++ ID    L  GQRIG+F+GSG+GKSTL+
Sbjct: 123 VMAGDV-YPLYARPPHPLLRKSISSPLPVGVKAIDGMLTLGRGQRIGIFSGSGVGKSTLM 181

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M  R+   +  +I L+GERGREV EF+  D     LK+SVVVVATSD+ P++R  A LT
Sbjct: 182 GMMVRNTEAEVSVIGLIGERGREVGEFLERDLGSSGLKRSVVVVATSDQPPLVRLKAALT 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  KG +VLL++DSITR A + R++    GE P  RGY  SVF+ LP+LLER 
Sbjct: 242 ATAIAEYFRDKGKDVLLLMDSITRVAMAQRDVGLAIGEPPATRGYTPSVFAFLPKLLERA 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E  +G+IT + +VLV+GD+ N+P+AD+VR ILDGHIVL+R LA +G YP +D L SV
Sbjct: 302 GAGE--RGSITGIYNVLVEGDDMNEPVADTVRGILDGHIVLSRKLASKGHYPAIDILRSV 359

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+     S         +  L+  +E+  D+  IG Y+ G +  +D A+  +  + DFL
Sbjct: 360 SRVMPNIVSQKHLAAAQRVRELLAIYEDAEDLVNIGAYKVGSNPNIDWALEHLDDVLDFL 419

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q          F+E  K L
Sbjct: 420 RQPVEGSFG---FEETVKLL 436


>gi|209515778|ref|ZP_03264641.1| ATP synthase F1, alpha subunit [Burkholderia sp. H160]
 gi|209503805|gb|EEA03798.1| ATP synthase F1, alpha subunit [Burkholderia sp. H160]
          Length = 513

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 107/446 (23%), Positives = 186/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS G++V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGNIVKTTGRILEVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L    ++  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLN-AKMTDAIEKIAPGVIWRKSVSEPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVAVDAIINQKGKNLVCIYVAIGQKASSIMNVVRKLEESGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|330718990|ref|ZP_08313590.1| F0F1 ATP synthase subunit alpha [Leuconostoc fallax KCTC 3537]
          Length = 507

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +   L V + G ++ +       T L+     G+ V          G    
Sbjct: 10  ALIKQQLEKFDTTLTVEEVGTVTYVGDGVARATGLA-NAMAGELVEFTNG---TYGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+NALG+PIDG   + K D
Sbjct: 66  LESNDVGIIILGKYDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPVEVKAPGVMQRKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D    VI   +G++   VR  +E          ++VV A   E   +  +AP     
Sbjct: 185 NQKDQNMIVIYVAIGQKDSTVRTQVETLRQMGALDYTIVVNAGPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPFIETQAGDVSAYIPTNVISITDGQIFLDADQFYAGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDAATQAKLARGRRTVEILK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QPLN 425


>gi|118498210|ref|YP_899260.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           novicida U112]
 gi|194324394|ref|ZP_03058167.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208780237|ref|ZP_03247579.1| ATP synthase F1, alpha subunit [Francisella novicida FTG]
 gi|254375019|ref|ZP_04990499.1| ATP synthase [Francisella novicida GA99-3548]
 gi|158512430|sp|A0Q8E1|ATPA_FRATN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118424116|gb|ABK90506.1| ATP synthase, F1 sector, subunit alpha [Francisella novicida U112]
 gi|151572737|gb|EDN38391.1| ATP synthase [Francisella novicida GA99-3548]
 gi|194321459|gb|EDX18944.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208743886|gb|EDZ90188.1| ATP synthase F1, alpha subunit [Francisella novicida FTG]
          Length = 513

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLND-VAAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|281346412|gb|EFB21996.1| hypothetical protein PANDA_006569 [Ailuropoda melanoleuca]
          Length = 507

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 24  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 79

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 80  KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPVG-SKTRRRVGLKAPGIIPRIS 138

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 139 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 198

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 199 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 258

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 259 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 318

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 319 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 378

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 379 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 429


>gi|164657506|ref|XP_001729879.1| hypothetical protein MGL_2865 [Malassezia globosa CBS 7966]
 gi|159103773|gb|EDP42665.1| hypothetical protein MGL_2865 [Malassezia globosa CBS 7966]
          Length = 532

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 106/439 (24%), Positives = 188/439 (42%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q     + N  V + G + +I      +  L + +   + V     +S   G  + 
Sbjct: 33  SILEQRISGATSNFDVEETGRVLAIGDGIARIYGL-RNIMAEEMVEF---SSGIRGMALN 88

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G    I  GD+V   G+   +       GRV++ALG P+DG   +   +
Sbjct: 89  LEADNVGVTVFGSDSLIKEGDIVKRTGQIVDVPVGPELLGRVVDALGNPVDGKGPIQASE 148

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
                  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK       +L
Sbjct: 149 -RRRTQVKAPGILPRRSVHEPMQTGMKPVDAMVPIGRGQRELIIGDRQTGKTALALDAIL 207

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRK 232
           +    +D  D       I   VG++   V + ++     D LK SV+V AT+ ++  L+ 
Sbjct: 208 NQRRWNDGNDDKKKLYCIYVAVGQKRSTVAQLVQTLEQNDALKYSVIVAATASDAAPLQY 267

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  +I E+F   G + L++ D +++ A + R+++      P    YP  VF    R
Sbjct: 268 LAPFTGCSIGEWFRDNGKHALVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 327

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     +  G  ++TA+  +   G + +  I  +V SI DG I L   L  +G  P 
Sbjct: 328 LLERAAKMSEANGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLESELFFKGIRPA 387

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A +   K +  SL   + ++ E   +     +   +D      +++ 
Sbjct: 388 VNVGLSVSRVGSAAQTKIYKAVAGSLKLYLAQYRE---LAAFAQFGSDLDASTRYTLNRG 444

Query: 411 PIIYDFLKQSPSDLSSEDV 429
             + + LKQ      + ++
Sbjct: 445 ARLTELLKQRQYSPLAVEI 463


>gi|154174815|ref|YP_001408811.1| F0F1 ATP synthase subunit alpha [Campylobacter curvus 525.92]
 gi|166201656|sp|A7H019|ATPA_CAMC5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|112803676|gb|EAU01020.1| ATP synthase F1, alpha subunit [Campylobacter curvus 525.92]
          Length = 505

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/430 (23%), Positives = 180/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E++  ++ V + G + S+      V  L + +  G+ V  +G      G  + 
Sbjct: 12  AIIKERIENFDLSVDVEETGKVISVADGVANVYGL-KNIMAGEMVEFEGGEK---GMALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G    I+ G  V    +  R+       GRV+N+LG+PID    +   +
Sbjct: 68  LEESSVGIVILGKTSGITEGSSVKRLKKLLRVPVGDALIGRVVNSLGEPIDAKGPIEATE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K    M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-VEEKAKGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++          ++VV A + ++  L+ +AP   VT
Sbjct: 187 NQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMDYTIVVNAGASDTAALQYLAPYAGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF     + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERASKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDALGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGAAQIKATKQVSGNLRLDLAQYRELQ---AFAQFASDLDESSRKQLERGQKMVEVLK 423

Query: 419 QSPSDLSSED 428
           Q P      +
Sbjct: 424 QPPYSPLPVE 433


>gi|242012578|ref|XP_002427008.1| ATP synthase subunit alpha, putative [Pediculus humanus corporis]
 gi|212511246|gb|EEB14270.1| ATP synthase subunit alpha, putative [Pediculus humanus corporis]
          Length = 552

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 187/439 (42%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           +    ++ + E+      +K  + + G + SI      V  L+  +   + V     +S 
Sbjct: 44  RRAAEISSILEEKILGASTKVDLEETGRVVSIGDGIARVYGLN-NIQADEMVEF---SSG 99

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGD 116
             G  + +  D V +   G  + I  GD+V   G    +       GRV++ALG  IDG 
Sbjct: 100 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEALLGRVVDALGNAIDGK 159

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-- 174
            ++        +  K P  + R  V++  +TGI+ +D   P+  GQR  +      GK  
Sbjct: 160 GAIN-TKARARVGIKAPGIIPRVSVKEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTS 218

Query: 175 ---STLLSMFARSDCFD-----KVIISLVGERGREVREFIED--YLGDNLKKSVVVVATS 224
                +++    +D  D       I   +G++   V + I        ++  +++V AT+
Sbjct: 219 VAIDAIINQKRFNDGKDENLKLYCIYVAIGQKRSTVAQIIVKRLTDSGSMNYTIIVSATA 278

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            ++  L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    YP 
Sbjct: 279 SDAAPLQYLAPYSGCAMGEFFRDSGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPG 338

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +    G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 339 DVFYLHSRLLERAAKMSEAHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETEL 398

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A +   K++  S+   + ++ E   +     +   +D  
Sbjct: 399 FYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAA 455

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + +++   + + LKQ  
Sbjct: 456 TQQLLNRGVRLTELLKQGQ 474


>gi|149029483|gb|EDL84697.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_d [Rattus norvegicus]
          Length = 503

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 180/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 20  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 75

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G   +   +  K P  + R  
Sbjct: 76  KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVG-SKIRRRVGLKAPGIIPRIS 134

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 135 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 194

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 195 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 254

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 255 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 314

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 315 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 374

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 375 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 425


>gi|159045476|ref|YP_001534270.1| F0F1 ATP synthase subunit alpha [Dinoroseobacter shibae DFL 12]
 gi|190358154|sp|A8LJR6|ATPA2_DINSH RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|157913236|gb|ABV94669.1| ATP synthase subunit alpha [Dinoroseobacter shibae DFL 12]
          Length = 512

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 188/442 (42%), Gaps = 30/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      V  L   V  G+ V   G      G
Sbjct: 12  LKEQIKNFGQEAE------VAEVGRVLSVGDGIARVHGL-DNVQAGEMVEFPGG---IRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + + +D V +   G   +I  GD+V        +       GRV++ LG P+DG   +
Sbjct: 62  MALNLEIDNVGVVIFGSDRDIKEGDIVKRTKSIVDVPVGDALLGRVVDGLGNPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              + S+    K P  + R+ V +   TG++ +D   P+  GQR  +      GK     
Sbjct: 122 ETTERSIA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAVAL 180

Query: 175 STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
            T+L+  A +D            +   VG++   V + ++       ++ S+VV AT+ +
Sbjct: 181 DTILNQKAYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEETGAIEYSIVVAATASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ +AP  A ++AE+F   G + L+I D +++ A S R+++      P    YP  V
Sbjct: 241 PAPMQFLAPYAATSMAEFFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      + GN   TA+  +   G + +  I  +V SI DG I L   L  
Sbjct: 301 FYLHSRLLERSAKLGDDHGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D    
Sbjct: 361 QGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDLDAATQ 417

Query: 405 KAVHQVPIIYDFLKQSPSDLSS 426
           + +++   + + +KQ      +
Sbjct: 418 QLLNRGARLTELMKQPQYSPLT 439


>gi|187931018|ref|YP_001891002.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|226739888|sp|B2SEX9|ATPA_FRATM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|187711927|gb|ACD30224.1| ATP synthase, F1 sector, subunit alpha [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 513

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLNDVVA-GEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|69214350|gb|AAZ03783.1| ATP synthase alpha chain [Nuphar advena]
          Length = 506

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 185/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G    + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIAPNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEILASEYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKPSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + D
Sbjct: 425 QSSPLAVD 432


>gi|290490196|gb|ADD31505.1| ATP synthase CF1 alpha subunit protein [Euonymus americanus]
          Length = 507

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 108/429 (25%), Positives = 188/429 (43%), Gaps = 16/429 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREIKIVNIGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLMIEEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYESLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           ++VV   +D    L+ +AP T   +A
Sbjct: 188 QGENVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D +    + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKVTQNQLARGQRLRELLKQS 424

Query: 421 PS-DLSSED 428
            S  L+ ED
Sbjct: 425 QSAPLAVED 433


>gi|146278239|ref|YP_001168398.1| F0F1 ATP synthase subunit alpha [Rhodobacter sphaeroides ATCC
           17025]
 gi|166201672|sp|A4WUM9|ATPA_RHOS5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145556480|gb|ABP71093.1| ATP synthase F1, alpha subunit [Rhodobacter sphaeroides ATCC 17025]
          Length = 512

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/437 (23%), Positives = 179/437 (40%), Gaps = 30/437 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   Q AE      V + G + S+      V  L   V  G+ V   G      G
Sbjct: 12  LKEQIKNFGQAAE------VAEVGRVLSVGDGIARVHGL-DNVQAGEMVEFPGG---IRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + + +D V +   G    I  GD V         P      GRV++ LG PIDG   +
Sbjct: 62  MALNLEVDNVGVVIFGDDRSIKEGDTVKRTKSIVDVPAGDALLGRVVDGLGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 122 AATERRVA-DVKAPGIIPRKGVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAIAL 180

Query: 180 MFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226
               +                  I   +G++   V + ++       +  ++VV AT+ +
Sbjct: 181 DTILNQKSYNEAAGDDESKKLYCIYVAIGQKRSTVAQLVKKLEETGAIAYTLVVAATASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    YP  V
Sbjct: 241 PAPMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER     KE G+   TA+  +   G + +  I  +V SI DG I L   L  
Sbjct: 301 FYLHSRLLERSAKLNKEHGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D    
Sbjct: 361 QGIRPAVNTGLSVSRVGSSAQTDAMKSVAGPVKLELAQYRE---MAAFAQFGSDLDAATQ 417

Query: 405 KAVHQVPIIYDFLKQSP 421
           + +++   + + +KQ  
Sbjct: 418 QLLNRGARLTELMKQPQ 434


>gi|116619602|ref|YP_821758.1| F0F1 ATP synthase subunit alpha [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122255869|sp|Q02BU3|ATPA_SOLUE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116222764|gb|ABJ81473.1| ATP synthase F1, alpha subunit [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 512

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 176/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E+Y + + V + G + S+      +  L + V  G+ +       D  G  + 
Sbjct: 11  SILRQEIENYERAIDVSEVGSVISVGDGIARIHGLEK-VMAGELIEFP---HDVAGIAMN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V    R   +       GRV+NALG+PIDG   +    
Sbjct: 67  LEEDQVGAVLLGDYTLIKEGDEVKRTKRIMSVPVGEALIGRVVNALGQPIDGKGPINATQ 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  + RQ V++   TGI+ +D   P+  GQR  +      GK+ +      
Sbjct: 127 FN-PIERLAPGVVARQPVKEPMMTGIKAVDAMIPIGRGQRELIIGDRQTGKTAIALDAII 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++    +     S+VVVA++ +   ++ +AP +   
Sbjct: 186 NQKGGDMICIYVAIGQKRSTVAQVVKTLEDNGAMEYSIVVVASASDPAPMQYLAPFSGCA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF     + L I D +++ A + REI+      P    +P  VF    RLLER    
Sbjct: 246 IGEYFRDSKRHALCIYDDLSKHAAAYREISLLLRRPPGREAFPGDVFYLHSRLLERAAKL 305

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E G  ++TA+  +     + +  I  +V SI DG I L   L    + P ++   SVS
Sbjct: 306 NNEHGAGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLEADLFNSNQRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K +   L   + ++ E   +     +   +D      +++   + + LK
Sbjct: 366 RVGGNAQTKAMKSIAGGLRLDLAQYRE---LAAFAQFGSDLDKSSQAQLNRGRHLVEILK 422

Query: 419 QSPSDL 424
           Q     
Sbjct: 423 QDQYQP 428


>gi|150019077|ref|YP_001311331.1| flagellar protein export ATPase FliI [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905542|gb|ABR36375.1| flagellar protein export ATPase FliI [Clostridium beijerinckii
           NCIMB 8052]
          Length = 438

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 164/427 (38%), Positives = 239/427 (55%), Gaps = 8/427 (1%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIRINLDI 69
           + +    + +   G +  +  +   V  +  +V  G+  +    KN     +V+    + 
Sbjct: 12  IKKASDASTIYSEGVVKKVIGLTIEVQGIKAFV--GELCIIYNEKNVPVNCEVVGFRDEF 69

Query: 70  VYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+     IS G  V        +  S    G +I+ LG P+D  DS+        +
Sbjct: 70  VILMPLDELIGISPGCRVVPQRKPLSVKCSDKLLGHIIDGLGNPLD-CDSISMDGEEYPL 128

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  + R+R+++   TG+R ID F     GQRIG+FAGSG+GKST L M AR    D
Sbjct: 129 ENDAPDPLKRKRIKEIMPTGVRAIDGFLTCGDGQRIGIFAGSGVGKSTTLGMIAREAKAD 188

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +ISL+GERGREV EFI +D   + +KKSVVV ATSD+  ++R    LTA  IAEYF  
Sbjct: 189 VNVISLIGERGREVLEFIEKDLGPEGMKKSVVVCATSDKPALIRIKGALTATAIAEYFRD 248

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG  V+L++DS+TRFA + RE+    GE P  +GY  SVF++LP+L+ER G S    G+I
Sbjct: 249 KGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAKLPKLMERSGTSAD--GSI 306

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L SVSRL +     
Sbjct: 307 TAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAHKNHYPAIDILNSVSRLMNTIAPK 366

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + K+  S    L+  ++++ D+  IG Y  G +  +D A++    + DFL Q   + +S 
Sbjct: 367 EHKEAASMARDLLATYKDSEDLINIGAYVKGSNKKIDMAINYNDSLNDFLCQGIDERTSF 426

Query: 428 DVFQEIT 434
           +  Q   
Sbjct: 427 EGTQNSL 433


>gi|332295441|ref|YP_004437364.1| ATP synthase subunit alpha [Thermodesulfobium narugense DSM 14796]
 gi|332178544|gb|AEE14233.1| ATP synthase subunit alpha [Thermodesulfobium narugense DSM 14796]
          Length = 504

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 102/432 (23%), Positives = 182/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E +  + +    N+  +      G I S+      +  L +   + + +      
Sbjct: 1   MKIRAEEITDVIKKQLSNIKAEPESALVGTIISVGDGVARIWGL-KDAMMSELLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            D  G V  +  D V    +G   +++ GD V   GR   +       GRV++ALG+P+D
Sbjct: 58  -DVYGIVFNLEEDSVGAIILGDDSKLNEGDTVKSTGRVISVPVGPELVGRVVDALGRPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TGI+ ID   P+  GQR  V      GK
Sbjct: 117 GKGPINAKKYRV-IERVAPGVITRQSVNQPVQTGIKAIDGMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V   I+    +     ++VVVA + ++  L+
Sbjct: 176 TAICVDTILNQKDQDMICIYVAIGQKASTVATIIKTLEDNGAMDYTIVVVANASDAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + E F  +G + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 236 YIAPFSGCAMGEEFMEQGKDALIIYDDLSKHAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     K    G++TA+  +     +    I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNKNYGGGSLTALPIIETQAGDVTAYIPTNVISITDGQIYLEPELFYAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A +   K++   L   + ++ E   +     +   +D    + + +
Sbjct: 356 AVNVGLSVSRVGGSAQTKAMKQVAGRLRLELAQYRE---LAAFAQFASDLDPATKQVLTR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GEKLVELLKQPQ 424


>gi|193213548|ref|YP_001999501.1| F0F1 ATP synthase subunit alpha [Chlorobaculum parvum NCIB 8327]
 gi|193087025|gb|ACF12301.1| ATP synthase F1, alpha subunit [Chlorobaculum parvum NCIB 8327]
          Length = 526

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 99/445 (22%), Positives = 173/445 (38%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      A+ Y        G +  +      +  LS  V  G+ +       D +G
Sbjct: 14  LRKQLAGFESEADVYD------VGTVLQVGDGIARIYGLS-NVAAGELLEFPN---DVMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V          +  GD V        I       GRV+N LG+PIDG   +
Sbjct: 64  MALNLEEDNVGAVMFSKASSVKEGDTVKRTNILASIPVGEAMLGRVVNPLGEPIDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              ++ + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 N-TEIRLPLERRAPGVIFRKSVHEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAVAL 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +      + I   +G +G  V + +           + VV AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVQCIYVAIGLKGSTVAQVVNTLEKHGAMEYTTVVSATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              TI E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGATIGEFFRDTGRHALVIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVARQMNDLPEPLKPMVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNAGQRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKATKAQLDRGARLVEILKQGQ 444


>gi|149377885|ref|ZP_01895614.1| flagellum-specific ATP synthase [Marinobacter algicola DG893]
 gi|149357827|gb|EDM46320.1| flagellum-specific ATP synthase [Marinobacter algicola DG893]
          Length = 460

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 236/417 (56%), Gaps = 7/417 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDIVYICPVGIGEEI 81
            G ++ +     T+ C+   + +GD  V  G+       +V+    D VY+ P+   E +
Sbjct: 25  SGRLTRMVG--LTLECVGCPMVVGDRCVITGQGAGTVEAEVVGFEDDRVYLMPLTAIEGL 82

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V       R+       GRV+N  G+P+DG   L + +  + +   +   ++R  
Sbjct: 83  RPGARVVPLSVASRVPVGPELLGRVVNGNGEPLDGKGPL-QAEARVSLSGDIINPLDRAP 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L+GERGR
Sbjct: 142 VRQSMDVGIRAINSLMTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADITVVGLIGERGR 201

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFIED LGD  L +SVVV + +D+SP++R  A +    IAEY+  +G  VLL++DS+
Sbjct: 202 EVKEFIEDILGDEGLARSVVVASPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSL 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + REIA   GE P  +GYP SVF++LP+L+ER G      G+ITA  +VL +GD+
Sbjct: 262 TRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDD 321

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             DPIAD+ R+ILDGHIVL+R LAEEG YP +D  AS+SR+  +    +          +
Sbjct: 322 QQDPIADAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFARAQRFKQV 381

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435
             R+++ RD+  +G Y  G D   D A+  +  +  FL+Q  ++ +  +D  Q++  
Sbjct: 382 YSRYQQARDLISVGAYVKGSDPETDFAITHIGNMGQFLQQGLNESAPLQDSIQQLLA 438


>gi|205375343|ref|ZP_03228133.1| F0F1 ATP synthase subunit alpha [Bacillus coahuilensis m4-4]
          Length = 502

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 179/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N      V   G +  I         L   V  G+ V      
Sbjct: 1   MSIKAEEISALIKTQIENYQSEMKVSDVGTVIQIGDGIARAHGL-DNVMAGELVEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G  + +  + V I  +G    I  GD V   G+   +       GRV+N+LG+P+D
Sbjct: 59  --VMGMALNLEENNVGIIILGPFSGIREGDEVRRTGKIMEVPVGKELIGRVVNSLGQPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I SK    M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GLGPINTTK-TRPIESKASGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +   + ++  + D     +   +G++   VR  +E          ++VV A++     + 
Sbjct: 176 TSVAIDTILNQRDQDMICVYVAIGQKESTVRNTVETLRKHGALDYTIVVTASASSPAPML 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T V++AE F   G + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVSMAEEFMFDGKHCLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER       KG  +ITA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDAKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E         +   +D      +++
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKVAGTLRLDLAAYRELE---AFAQFGSDLDAATQAKLNR 412

Query: 410 VPIIYDFLKQSPS 422
                + LKQ  +
Sbjct: 413 GARTVEVLKQDLN 425


>gi|222084186|ref|YP_002519780.1| ATP synthase CF1 alpha chain [Gnetum parvifolium]
 gi|190358175|sp|A6BM08|ATPA_GNEPA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|149941372|dbj|BAF64853.1| ATPase alpha subunit [Gnetum parvifolium]
 gi|220983523|dbj|BAH11291.1| ATP synthase CF1 alpha chain [Gnetum parvifolium]
          Length = 508

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + VV  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 12  SIIREQIEQYNNEIQVVNMGTVLQVGDGIARIHGLYE-VMAGELVEFE---DSTVGIALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   G+  +I  S  + GR++NAL +PIDG   +   +
Sbjct: 68  LETQNVGVVLMGDGLTIKEGSFVKTTGKIAQIPVSDAFLGRIVNALAQPIDGRGPIPASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 128 FRL-IESPAPGIVSRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 186

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +     V+     +G++   V + +        ++ ++VVV  +D    L+ +AP T   
Sbjct: 187 NQKGQNVVCVYVAIGQKASSVAQVVNMLRERSAMEYTIVVVEPADSPATLQYLAPYTGTA 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 LAEYFMYKKKHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G+ITA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 307 NSQLGEGSITALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +  E         +   +D      + +   + + LK
Sbjct: 367 RVGSAAQIKAMKQVAGKLKLELAQTAELE---AFAQFASDLDKGTQDQLARGQRLRESLK 423

Query: 419 QSPS 422
           Q  S
Sbjct: 424 QPQS 427


>gi|332678945|gb|AEE88074.1| ATP synthase alpha chain [Francisella cf. novicida Fx1]
          Length = 513

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLND-VAAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|210613762|ref|ZP_03289876.1| hypothetical protein CLONEX_02083 [Clostridium nexile DSM 1787]
 gi|210150971|gb|EEA81979.1| hypothetical protein CLONEX_02083 [Clostridium nexile DSM 1787]
          Length = 503

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 102/432 (23%), Positives = 180/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K       V   G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQIKRYASELEVSDVGTVIQVADGIARIHGL-ENAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G    I+ GD V   GR   +    C  GRV+NALG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGAVLLGDQRNINEGDTVKTTGRVVEVPVGDCMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +   +I       + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIQATNFR-QIERVASGVIARKSVDTPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   ++ +        + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVKCIYVAIGQKASTVANIVKVFEEYGAMDYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + E +   G++VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEEWMENGEDVLIVYDDLSKHATAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARLSDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETEMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+   +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AVNPGISVSRVGGSAQIKAMKKIAGPIRIDLAQYRE---LAAFAQFGSELDADTKERLAQ 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GVRIKEVLKQPQ 424


>gi|58385536|ref|XP_314018.2| AGAP005134-PA [Anopheles gambiae str. PEST]
 gi|55240520|gb|EAA44524.2| AGAP005134-PA [Anopheles gambiae str. PEST]
          Length = 551

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   + K      +  K P  + R  
Sbjct: 124 KEGDIVKRTGAIVDVPVGDEILGRVVDALGNAIDGKGEI-KTKQRFRVGIKAPGIIPRVS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDGQDESKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLTDSGAMNYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPTLGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|254465980|ref|ZP_05079391.1| ATP synthase F1, alpha subunit [Rhodobacterales bacterium Y4I]
 gi|206686888|gb|EDZ47370.1| ATP synthase F1, alpha subunit [Rhodobacterales bacterium Y4I]
          Length = 512

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 105/447 (23%), Positives = 184/447 (41%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V I   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLENDNVGIVIFGSDRDIKEGDTVKRTNSIVDVPAGPELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINASERKVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
                 T+L+    +D            +   VG++   V + ++          S+VV 
Sbjct: 176 TAVALDTILNQKTYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEEAGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   L+ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPLQFLAPYAATAMAEYFRDSGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNAMKTVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|169335791|ref|ZP_02862984.1| hypothetical protein ANASTE_02216 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258529|gb|EDS72495.1| hypothetical protein ANASTE_02216 [Anaerofustis stercorihominis DSM
           17244]
          Length = 502

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 181/430 (42%), Gaps = 18/430 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++++ ++  KN          G I S+      V  L     +G+ ++  G  
Sbjct: 1   MNLKPEEISRIIKEQIKNYDKKIETTSVGTILSVGDGIARVHGL-DGAMMGELILFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  D V    +G   +I  GD V   G+   +       GRV+NALG+PID
Sbjct: 58  -DVYGMVLNLEEDNVGCVLLGDDTDIVEGDTVKCTGKIMSVPVGDGVIGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+   +       K    ++R+ V    +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGSIVAEEYRKA-DVKASGVIDRKSVTIPLQTGYKAIDSLIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L      +        +   +G++   V + +           + VV AT+ E   L+
Sbjct: 176 TALAVDTILNQKGEDVLCVYVAIGQKASTVAQIVGTLEEYGAMDYTTVVCATASEMAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   IAEYF  KG +VL++ D +++ A + R +       P    YP  VF    
Sbjct: 236 YLAPYSGCAIAEYFMDKGKDVLIVYDDLSKHAVAYRSMTLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER    EK  G+ITA+  +     + +  I  +V SI DG I L   L   G  P V
Sbjct: 296 RLLERAARLEK-GGSITALPIIETQAGDISAYIPTNVISITDGQIFLETELFNAGVRPAV 354

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +P  SVSR+   A  +  KK+   L     ++ E   +     +   +D     ++ +  
Sbjct: 355 NPGISVSRVGGSAQISTMKKVGGPLRIEYAQYRE---LASFAQFGSDLDKSTKASLEKGK 411

Query: 412 IIYDFLKQSP 421
            I + LKQ  
Sbjct: 412 RIVEMLKQEQ 421


>gi|197132398|gb|ACH47717.1| ATP synthase CF1 alpha subunit [Sarcocaulon vanderietiae]
          Length = 501

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 188/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y++ + +V  G +  +      V  L++ V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIKQYNREVKIVNMGTVLRVGDGIARVYGLNE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GR++NAL KPIDG  ++   +  
Sbjct: 69  SNNVGVVLMGGGLMIQEGSSVKATGRIAQIPVSEAYLGRIVNALAKPIDGRGAISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + + ++        ++VV  T+     L+ +AP T   +A
Sbjct: 188 RGKDVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EFFMYRERHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLDLAQFTELE---AFAQFASDLDKTTQNQLARGRRLREVLKQS 424

Query: 421 PSDLSSED 428
            S+    D
Sbjct: 425 QSEPLEVD 432


>gi|154687798|ref|YP_001422959.1| F0F1 ATP synthase subunit alpha [Bacillus amyloliquefaciens FZB42]
 gi|308175411|ref|YP_003922116.1| ATP synthase subunit alpha, component F1 [Bacillus
           amyloliquefaciens DSM 7]
 gi|166201651|sp|A7Z9Q2|ATPA_BACA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|52673268|emb|CAH56507.1| ATP synthase alpha chain [Bacillus amyloliquefaciens FZB42]
 gi|154353649|gb|ABS75728.1| AtpA [Bacillus amyloliquefaciens FZB42]
 gi|307608275|emb|CBI44646.1| ATP synthase (subunit alpha, component F1) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555389|gb|AEB25881.1| F0F1 ATP synthase subunit alpha [Bacillus amyloliquefaciens TA208]
 gi|328913760|gb|AEB65356.1| ATP synthase subunit alpha [Bacillus amyloliquefaciens LL3]
          Length = 502

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 107/437 (24%), Positives = 179/437 (40%), Gaps = 15/437 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  ++Y   + V   G +  +      V  L      G+ V         LG    + 
Sbjct: 12  IKQQIQNYQSEIEVHDVGTVIQVGDGIARVHGL-DNCMAGELVEFSNG---VLGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G   +I  GD V   GR   +       GR++N LG+P+DG   +     +
Sbjct: 68  ESNVGIVILGPYRDIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++  +
Sbjct: 127 RPIESQAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDTILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     +   +G++   VR  +E          ++VV A++ +   L  +AP   VT+ 
Sbjct: 187 KDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER      
Sbjct: 247 EEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            KG  +ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLKQD 423

Query: 421 PSDLSSEDVFQEITKKL 437
            +     +    I   L
Sbjct: 424 LNKPLPVEKQVAILYAL 440


>gi|288554387|ref|YP_003426322.1| F0F1 ATP synthase subunit alpha [Bacillus pseudofirmus OF4]
 gi|14916960|sp|P22477|ATPA_BACPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|12061044|gb|AAG48361.1|AF330160_8 ATP synthase alpha subunit [Bacillus pseudofirmus OF4]
 gi|288545547|gb|ADC49430.1| ATP synthase alpha subunit [Bacillus pseudofirmus OF4]
          Length = 502

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 104/430 (24%), Positives = 177/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +  ++ VQ  G +  +         L + V  G+ +         +G    
Sbjct: 10  SLIKQQIESFQSDVQVQDVGTVIRVGDGIALAHGL-ENVMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + + I  +G   +I  GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEENNIGIIILGPYTDIREGDEVKRTGRIMEVPVGEELLGRVVNPLGQPIDGLGPIATTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            S  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -SRPIESPAPGVMDRKSVHEPLQTGIKSIDTMIPIGRGQRELIIGDRQTGKTAIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V   +E          ++VV A++ +   +  +AP   V+
Sbjct: 185 NQKDEDMICIYVAIGQKDSTVAGVVETLRQRGALDYTIVVSASASDPAPMLFLAPYAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVIYDDLSKQASAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 SDAKGGGSITALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFYSGIRPAVNAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q   +    +
Sbjct: 422 QDLHNPLPVE 431


>gi|182677219|ref|YP_001831365.1| ATP synthase F1, alpha subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633102|gb|ACB93876.1| ATP synthase F1, alpha subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 509

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 179/436 (41%), Gaps = 28/436 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K +      AE      V + G + S+      V  L   V +G+ V  +   S   G
Sbjct: 12  LKKEIANFGNEAE------VTEVGQVLSVGDGIARVYGL-DNVEVGEMVDFE---SGVRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             I +  D V +   G    +S G  V       ++       GRV++ALG PIDG   +
Sbjct: 62  VAINLEADNVGVVIFGSDRTVSEGQTVKRSRTIVQVPVGKELLGRVVDALGNPIDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                S     K P  + R+ V +   TGI+ ID   P+  GQR  +      GK     
Sbjct: 122 NAA-QSARADIKAPGIIPRKSVHEPMSTGIKAIDALIPIGRGQRELIIGDRQTGKTAVAL 180

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
             +L+    +   D       +   +G++   V +F++          S+VV AT+ +  
Sbjct: 181 DAMLNQKPANLGTDENAKLYCVYVAIGQKRSTVAQFVKVLEEQGALPYSIVVAATASDPA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            ++ +AP     + EYF   G + L+  D +++ A + R+++      P    YP  VF 
Sbjct: 241 PMQYLAPFAGCAMGEYFRDNGMHALITYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      EKG  ++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKLSDEKGAGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFYQG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+   +   + ++ E   +     +   +D    K 
Sbjct: 361 IRPAVNVGISVSRVGSAAQTKSMKKVAGKIKGELAQYRE---MAAFAQFGSDLDATTQKL 417

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   + + LKQ   
Sbjct: 418 LARGSRLTELLKQPQF 433


>gi|91201496|emb|CAJ74556.1| strongly similar to ATP synthase subunit alpha [Candidatus Kuenenia
           stuttgartiensis]
          Length = 504

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/427 (23%), Positives = 184/427 (43%), Gaps = 15/427 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y + L ++  GY+  +      +  L + +   + +       +  G  + 
Sbjct: 10  SIIKREIESYEEKLKLENVGYVMQVGDGVARIYGLDECMS-NELLEFP---DNVYGIAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  GD+V   G+  ++       GRV+NALG PIDG   +   +
Sbjct: 66  LEEDNVGAILLGSEDKIKEGDIVKTTGKIVQVPVGKAMLGRVVNALGLPIDGKGPIATDE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+ +L     
Sbjct: 126 FR-PIEGNSPNVVERQPVKEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAILVDTII 184

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++    +N+   S+VVVA++ +   L+ +AP     
Sbjct: 185 NQRTSGVYCIYVAIGQKMSTVASVVKTLEENNVMDNSIVVVASAGDPAPLQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + +++ D + + A + R+I+      P    +P  +F+   RLLER    
Sbjct: 245 MGEYFRDNGMHAVVMYDDLYKHAIAYRQISLLLRRPPGREAFPGDIFNLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V   G +++  I  +V SI DG I L   L   G  P +    SVS
Sbjct: 305 NDELGAGSLTALPVVETQGGDYSAYIPTNVISITDGQIYLESDLFNAGVRPAISVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + ++ E   +     +   +D      + +   + + LK
Sbjct: 365 RVGGNAQIPAMKKVAGMLRLTLAQYRE---MASFAQFGSELDKFTQAQIAKGERLVEILK 421

Query: 419 QSPSDLS 425
           Q   + +
Sbjct: 422 QPQYEPA 428


>gi|88807381|ref|ZP_01122893.1| ATP synthase subunit A [Synechococcus sp. WH 7805]
 gi|88788595|gb|EAR19750.1| ATP synthase subunit A [Synechococcus sp. WH 7805]
          Length = 506

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 112/424 (26%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYIS-SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V        +      V  L Q V  G+ V  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGSVLQVGDGIARVYGL-QQVMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N LG P+DG   LG  +
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSTVRATGKIASVPVGDGLLGRVVNPLGVPLDGKGDLGASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 SRL-IESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   V +  E          +V+V A + +   L+ +AP T  +
Sbjct: 186 NQKDQDVVCVYVAIGQKAASVAQVTEVLRERGALDYTVIVAANASDPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQKQLGRGKRLRELLK 422

Query: 419 QSPS 422
           QS  
Sbjct: 423 QSQF 426


>gi|154149226|ref|YP_001406266.1| F0F1 ATP synthase subunit alpha [Campylobacter hominis ATCC
           BAA-381]
 gi|166201657|sp|A7I175|ATPA_CAMHC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|153805235|gb|ABS52242.1| ATP synthase F1, alpha subunit [Campylobacter hominis ATCC BAA-381]
          Length = 505

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 100/430 (23%), Positives = 179/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E++  N+ + + G + ++     +V  L + V   + V  +       G  + 
Sbjct: 12  SIIKERIENFELNINIEETGKVVNVADGVASVYGL-KNVMANEMVEFENG---VKGLALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +  +G    I  G  V   G+  R+       GRV+NALG+PID    +   +
Sbjct: 68  LEENSVGVVILGSISGIVEGTSVKRLGKLLRVPVGDALIGRVVNALGEPIDAKGPIEYSE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K    M R+ V +  +TG++ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-VEEKAKGIMARKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTVAVDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++          ++VV A + E   L+ +AP    T
Sbjct: 187 NQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMDYTIVVSAGASEPAALQYLAPYAGCT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF     + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERASKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 SDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESGLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGSAQIKAIKKVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLDRGQRMVEILK 423

Query: 419 QSPSDLSSED 428
           Q P      +
Sbjct: 424 QPPYSPLPVE 433


>gi|290790846|gb|ADD63102.1| ATP synthase CF1 alpha subunit [Microlaena stipoides]
          Length = 533

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/431 (23%), Positives = 183/431 (42%), Gaps = 15/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 36  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 91

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 92  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGKGEIVAS 151

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 152 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 210

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +        ++VV   +D    L+ +AP T  
Sbjct: 211 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEAGAMEYTIVVAEMADSPATLQYLAPYTGA 270

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 271 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 330

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 331 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 390

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 391 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 447

Query: 418 KQSPSDLSSED 428
           KQS ++    +
Sbjct: 448 KQSQANPLPVE 458


>gi|50058581|gb|AAT69043.1| F1-ATPase alpha subunit [Odonellia hirtiflora]
          Length = 429

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|326796467|ref|YP_004314287.1| flagellar protein export ATPase FliI [Marinomonas mediterranea
           MMB-1]
 gi|326547231|gb|ADZ92451.1| flagellar protein export ATPase FliI [Marinomonas mediterranea
           MMB-1]
          Length = 449

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 167/439 (38%), Positives = 251/439 (57%), Gaps = 9/439 (2%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQ 61
           + +  L  L    S  +V   G ++ +     T+  +   V LGD   V  G +     +
Sbjct: 6   ERMSRLDSLNVRVSSPIV--EGKVTRMVG--LTMEAVGCKVALGDRCNVQVGASKWVESE 61

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V+  N  + Y+ P    E I+ G  V       R+       GRVIN LG+P+DG   + 
Sbjct: 62  VVGFNGKLTYLMPTEAIEGIAPGARVVPLDDDSRMPVGDHLLGRVINGLGRPLDGRGPI- 120

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             D S+ +  ++   + R+ +      GI+ I+    +  GQR+G+FAGSG+GKS LL M
Sbjct: 121 TSDESISLQGEIINPLQRKPISDTLDVGIKTINSLLTVGKGQRLGLFAGSGVGKSMLLGM 180

Query: 181 FARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R    D  I+ L+GERGREV+EFI +    + L KSVV+ + +D+S ++R  A +   
Sbjct: 181 MTRFTEADITIVGLIGERGREVKEFIEQILGEEGLAKSVVIASPADDSALMRLRAAMLTT 240

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAEYF  +G NVLL++DS+TR+A + REIA + GE P  +GYP SVFS+LP+L+ER G 
Sbjct: 241 RIAEYFRDQGRNVLLLMDSLTRYAQAQREIALSVGEPPATKGYPPSVFSKLPQLVERAGN 300

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            ++  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LAEEG YP +D  AS+SR
Sbjct: 301 GKEGGGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRRLAEEGHYPAIDIEASISR 360

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S++  +    +  L  +F++ RD+  +G Y  G D  LD+A+  +P I DFL+Q
Sbjct: 361 AMPHIVSSEHLQGAMRVKQLYSKFQQNRDLISVGAYSKGSDPDLDQAIMLMPDINDFLRQ 420

Query: 420 SPSD-LSSEDVFQEITKKL 437
           S S+  + E   +++ + L
Sbjct: 421 SLSESFNLEQSLEKLVQAL 439


>gi|195953388|ref|YP_002121678.1| F0F1 ATP synthase subunit alpha [Hydrogenobaculum sp. Y04AAS1]
 gi|226739897|sp|B4U989|ATPA_HYDS0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|195933000|gb|ACG57700.1| ATP synthase F1, alpha subunit [Hydrogenobaculum sp. Y04AAS1]
          Length = 502

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 5   LETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE L    + +  ++ ++  G + ++         L   V   + +      +   G   
Sbjct: 9   LEILKSQLQSFETDIKMEEVGVVYAVGDGVARAYGL-DNVMANELLEFDSGEA---GLAF 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V I  +G    I  G +V   GR           GRVI+ LG P+DG   +   
Sbjct: 65  NLEEDNVGIIILGSESGIKEGSIVKRTGRILDAPVGEELVGRVIDPLGNPLDGKGPIN-A 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
                +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++
Sbjct: 124 KHRSPVEKIAPGIVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTVAIDTI 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++       IE    +   K + VVVA++ +   L+ +AP T  
Sbjct: 184 LNQKDTDVYCIYVAIGQKKSTTARIIELLEREGAMKYTTVVVASATDPAPLQYLAPFTGC 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TI EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 244 TIGEYFRDNGKHALIVYDDLSKHAEAYRQLSLLVRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SV
Sbjct: 304 LYDELGAGSLTALPIIETKAGDVSAYIPTNVISITDGQIYLEPDLFNKGIRPAINVGLSV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++  +L   + +F E         +   +D      +++   + + L
Sbjct: 364 SRVGGSAQIKAMKQVAGTLRLDLAQFRELE---AFMQFASDLDKATQDTINRGLRLVELL 420

Query: 418 KQSP 421
           KQ P
Sbjct: 421 KQGP 424


>gi|291460683|ref|ZP_06600073.1| ATP synthase F1, alpha subunit [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291416642|gb|EFE90361.1| ATP synthase F1, alpha subunit [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 513

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 186/439 (42%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAED---YSKNLVVQG--GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++++      Y +N ++Q   G + ++      V+ L+  +  G+ +  Q   
Sbjct: 1   MELKPEKISEVIRSQIKYYENAIIQNETGTVLTVGDGIARVSGLTNCMS-GELLEFQDG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +    V     G    I  G      GR   +       GRV+NA+G+PID
Sbjct: 59  --TYGMAQNLEETSVSAVLFGSDVGIQEGQTAKRTGRVVSVPVGEAMIGRVVNAIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    + S  P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GAGPIESSEFRA-VESPAPGIIKRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        I   +G++   V   + +         S+VV AT+ E   L+
Sbjct: 176 TTIAIDTIINQKGKDVLCIYVAIGQKRSTVTALVNELKEAGAMDYSIVVAATASEPSPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF ++G +VL+I D +++ A + R I+      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFMNQGKHVLIIYDDLSKHAVAYRAISLLIRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSEEMGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGIMP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+P  SVSR+   A     KK+  +L  +  ++ E +     G     +D      + Q
Sbjct: 356 AVNPGISVSRVGGNAQIKAMKKVAGTLKLVYSQYRELQSFAQFG---SDLDADTKARLAQ 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I + LKQ  S   S +
Sbjct: 413 GERIVEVLKQGKSSPVSVE 431


>gi|195430526|ref|XP_002063305.1| GK21455 [Drosophila willistoni]
 gi|194159390|gb|EDW74291.1| GK21455 [Drosophila willistoni]
          Length = 552

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 182/422 (43%), Gaps = 23/422 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEGQDESKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          SV+V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 244 IYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSS 426
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ     +S 
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSI 480

Query: 427 ED 428
           ED
Sbjct: 481 ED 482


>gi|68164788|ref|YP_247584.1| ATP synthase CF1 alpha subunit [Cucumis sativus]
 gi|67511383|emb|CAJ00743.1| ATP synthase CF1 alpha chain [Cucumis sativus]
          Length = 506

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 178/428 (41%), Gaps = 16/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYTREVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   D  
Sbjct: 69  SNNVGVVLMGDGLLIQEGSSVKATGRIVQIPVSEAYLGRVINALAKPIDGRGEISSSDSR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  + R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIILRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           +++V  T+D    L+ +AP T     
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVSTLQERGAMEYTIIVAETADSPATLQYLAPYTGAAWL 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
                  ++ L I D  ++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 NIL-CTENSTLHIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 307 ALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 367 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 423

Query: 421 PSDLSSED 428
            S   + D
Sbjct: 424 QSAPLTVD 431


>gi|312879586|ref|ZP_07739386.1| type III secretion system ATPase, FliI/YscN [Aminomonas paucivorans
           DSM 12260]
 gi|310782877|gb|EFQ23275.1| type III secretion system ATPase, FliI/YscN [Aminomonas paucivorans
           DSM 12260]
          Length = 443

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 160/422 (37%), Positives = 239/422 (56%), Gaps = 9/422 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICP 74
             LV   G +  +  +   +      + +GD    + +N   +   +V+    D V + P
Sbjct: 20  TELVRLNGRVVQVVGLV--IESQGPDIQVGDLCEVRFRNRPTVLRAEVVGFRSDRVLLMP 77

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G   +I  G  V   G    +       GR+++ LG P+DG   L   D    + +  P
Sbjct: 78  LGELSDIGPGCDVVAMGPTLGVHVGDSLLGRIVDGLGVPLDGKGPLVAKDF-YPLFATPP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + RQ ++K    G++V+D    L  GQR+G+FAGSG+GKS LL M AR+      +I+
Sbjct: 137 HPLKRQMIDKPLSVGVKVLDGLLTLGQGQRVGIFAGSGVGKSVLLGMMARNTEAAVNVIA 196

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           LVGERGREV+EF+  D     L +SVVVVATSD+ P++R  A LTA  IAEYF  +G NV
Sbjct: 197 LVGERGREVKEFVERDLGEAGLARSVVVVATSDQPPLVRLKAALTATAIAEYFRDQGGNV 256

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR A + R++    GE P  RGY  SVF+ LPRLLER G  E  +G+ITA+ +
Sbjct: 257 LLMMDSVTRVAMAQRDVGLAIGEPPATRGYTPSVFAFLPRLLERSGAGE--RGSITAIYT 314

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+P+AD+VR ILDGH VL+R+LA +  YP V+   SVSR+     S +  + 
Sbjct: 315 VLVEGDDMNEPVADTVRGILDGHFVLSRTLAAKNHYPSVEVGRSVSRVMPSIVSPEHLEA 374

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              +  L+  +EE +D+  IG Y+ G +  +D A+  +  +  FL+Q   +  S +  Q+
Sbjct: 375 AGRIRELLAVYEEAQDLVNIGAYKAGSNPRVDWALENLDPVRRFLRQGMMERFSFEETQQ 434

Query: 433 IT 434
           + 
Sbjct: 435 LL 436


>gi|114052278|ref|NP_001040233.1| ATP synthase [Bombyx mori]
 gi|87248463|gb|ABD36284.1| ATP synthase [Bombyx mori]
          Length = 553

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +      M +  K P  + R  
Sbjct: 124 KEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPID-TKSRMRVGIKAPGIIPRVS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +   D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQQRFNKGEDEKKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +  +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLTDAGAINYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGMRLTELLKQGQ 473


>gi|57115601|gb|AAW33107.1| F1-ATPase alpha subunit [Veronica incana]
          Length = 424

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKALLGRVVDGLGLPIDGRGALSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTEILKQPQ 405


>gi|321459762|gb|EFX70812.1| hypothetical protein DAPPUDRAFT_309281 [Daphnia pulex]
          Length = 549

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 104/414 (25%), Positives = 181/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 66  ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 121

Query: 82  SLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G     P  A   GRV++ALG PIDG  SL  G     +  K P  + R  
Sbjct: 122 KEGDIVKRTGAIVDVPIGAELLGRVVDALGNPIDGKGSL-AGAKRARVGVKAPGIIPRIS 180

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK       +++    +D  D       
Sbjct: 181 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDAIINQKRFNDGADEKKKLYC 240

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +   + EYF   G
Sbjct: 241 IYVAIGQKRSTVAQIVKRLTDSDAMKYTIVVAATASDAAPLQFLAPYSGCAMGEYFRDNG 300

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 301 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNEVHGGGSL 360

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 361 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 420

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 421 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDASTQQLLSRGVRLTELLKQGQ 471


>gi|50058565|gb|AAT69035.1| F1-ATPase alpha subunit [Ipomoea batatas]
 gi|50058571|gb|AAT69038.1| F1-ATPase alpha subunit [Ipomoea pes-tigridis]
 gi|50058573|gb|AAT69039.1| F1-ATPase alpha subunit [Merremia vitifolia]
 gi|50058575|gb|AAT69040.1| F1-ATPase alpha subunit [Merremia peltata]
 gi|50058583|gb|AAT69044.1| F1-ATPase alpha subunit [Tetralocularia pennellii]
 gi|50058585|gb|AAT69045.1| F1-ATPase alpha subunit [Hildebrandtia valo]
 gi|50058587|gb|AAT69046.1| F1-ATPase alpha subunit [Seddera hirsuta]
 gi|50058591|gb|AAT69048.1| F1-ATPase alpha subunit [Stylisma patens]
 gi|50058593|gb|AAT69049.1| F1-ATPase alpha subunit [Wilsonia backhousei]
 gi|50058597|gb|AAT69051.1| F1-ATPase alpha subunit [Porana velutina]
 gi|50058601|gb|AAT69053.1| F1-ATPase alpha subunit [Neuropeltis acuminata]
 gi|50058609|gb|AAT69057.1| F1-ATPase alpha subunit [Dicranostyles ampla]
 gi|50058615|gb|AAT69060.1| F1-ATPase alpha subunit [Erycibe glomerata]
 gi|50058617|gb|AAT69061.1| F1-ATPase alpha subunit [Poranopsis paniculata]
 gi|50058619|gb|AAT69062.1| F1-ATPase alpha subunit [Dinetus truncatus]
 gi|50058621|gb|AAT69063.1| F1-ATPase alpha subunit [Porana commixta]
          Length = 430

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|290790778|gb|ADD63035.1| ATP synthase CF1 alpha subunit [Potamophila parviflora]
          Length = 533

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 104/431 (24%), Positives = 184/431 (42%), Gaps = 15/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 36  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 91

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 92  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 151

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 152 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 210

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 211 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 270

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 271 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 330

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 331 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 390

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 391 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 447

Query: 418 KQSPSDLSSED 428
           KQS S+    +
Sbjct: 448 KQSQSNPLPVE 458


>gi|254373553|ref|ZP_04989040.1| ATP synthase subunit A [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151571278|gb|EDN36932.1| ATP synthase subunit A [Francisella novicida GA99-3549]
          Length = 513

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLND-VAAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGDV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|50058595|gb|AAT69050.1| F1-ATPase alpha subunit [Falkia repens]
          Length = 430

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVRRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQS 
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQSQ 408


>gi|56707241|ref|YP_169137.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669711|ref|YP_666268.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456301|ref|ZP_03664774.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254369926|ref|ZP_04985934.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874079|ref|ZP_05246789.1| ATP synthase alpha subunit [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|81677143|sp|Q5NIK5|ATPA_FRATT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122971110|sp|Q14K08|ATPA_FRAT1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56603733|emb|CAG44695.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320044|emb|CAL08078.1| ATP synthase alpha chain [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568172|gb|EDN33826.1| hypothetical protein FTBG_01518 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840078|gb|EET18514.1| ATP synthase alpha subunit [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158350|gb|ADA77741.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 513

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLND-VAAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHAIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|195346855|ref|XP_002039970.1| GM15951 [Drosophila sechellia]
 gi|194135319|gb|EDW56835.1| GM15951 [Drosophila sechellia]
          Length = 552

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          SV+V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 244 IYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 474


>gi|543865|sp|Q06735|ATPAM_BETVU RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|285632|dbj|BAA03664.1| F1-ATPase alpha subunit [Beta vulgaris subsp. vulgaris]
 gi|54606687|dbj|BAD66710.1| ATPase subunit 1 [Beta vulgaris subsp. vulgaris]
          Length = 506

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 175/439 (39%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   VG++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQLNSKATSESETLYCVYVAVGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVPKQPQ 435


>gi|24658560|ref|NP_726243.1| bellwether [Drosophila melanogaster]
 gi|5921205|sp|P35381|ATPA_DROME RecName: Full=ATP synthase subunit alpha, mitochondrial; AltName:
           Full=Protein bellwether; Flags: Precursor
 gi|1556392|emb|CAA69202.1| mitochondrial ATP synthase alpha subunit precursor [Drosophila
           melanogaster]
 gi|7291477|gb|AAF46903.1| bellwether [Drosophila melanogaster]
 gi|28317168|gb|AAO39595.1| HL08087p [Drosophila melanogaster]
 gi|220947264|gb|ACL86175.1| blw-PA [synthetic construct]
 gi|220956710|gb|ACL90898.1| blw-PA [synthetic construct]
          Length = 552

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          SV+V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 244 IYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 474


>gi|329726169|gb|EGG62641.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU144]
          Length = 503

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 113/426 (26%), Positives = 181/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G  EEIS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYEEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP + VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    K + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAKKLARGERTVEVLK 421

Query: 419 QSPSDL 424
           Q  ++ 
Sbjct: 422 QGQNNP 427


>gi|123966863|ref|YP_001011944.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9515]
 gi|158512734|sp|A2BYH6|ATPA_PROM5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123201229|gb|ABM72837.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9515]
          Length = 505

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY +++ V   G +  I      +  L Q V  G+ +  +       G  + 
Sbjct: 11  SILKQQITDYDQSVSVSNVGTVLQIGDGIARIYGLDQ-VMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    +  G  V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 67  LEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMKGRVVNPLGQPIDGKGEIPTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 NRL-IEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E          +VVV A + E+  L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKSASVANVVEVLREKGALDYTVVVSAGASEAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDDMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q+  
Sbjct: 423 QAQF 426


>gi|239616627|ref|YP_002939949.1| ATP synthase F1, alpha subunit [Kosmotoga olearia TBF 19.5.1]
 gi|259585431|sp|C5CIV6|ATPA_KOSOT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|239505458|gb|ACR78945.1| ATP synthase F1, alpha subunit [Kosmotoga olearia TBF 19.5.1]
          Length = 502

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 181/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +   + ++ E+  K    +      G I  +         L + V   + V  +   
Sbjct: 1   MKISPSEITKIIEEQLKRSDREIDYFEAGRIIQVGDGIARAYGL-KGVMSNELVQFENGE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V I  +G   EI  GDLV   GR    P      GRV+N LG P+D
Sbjct: 60  ---YGLALNLEEDNVGIVVLGDYREIKEGDLVKRTGRIIEVPAGEALLGRVVNPLGIPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIEASE-HRPVEIKAPGVVMRKPVDTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   I+          + +V AT+++   L 
Sbjct: 176 TAIAIDTIINQKDQGVYCIYVAIGQKTAVLARIIDKLEETGAMEYTTIVAATANDPATLA 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF   G + L+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGAAMGEYFMYSGKDALVIYDDLSKHAAAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +E   G++TA+  +    ++ +  I  +V SI DG I L+ +L   G  P
Sbjct: 296 RLLERAARLNEEHGGGSLTALPIIETLANDVSAYIPTNVISITDGQIYLDPNLFYAGNRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  SL   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQIKAMKKIAGSLRLDLAQYRE---LLAFAQFSTELDKATQAQLIR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GEKLTELLKQEQ 424


>gi|157325515|ref|YP_001468293.1| ATP synthase CF1 alpha subunit [Ipomoea purpurea]
 gi|190358178|sp|A7Y3A4|ATPA_IPOPU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|157056743|gb|ABV02333.1| ATP synthase CF1 alpha subunit [Ipomoea purpurea]
          Length = 507

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 105/422 (24%), Positives = 181/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVNIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V    R  +I     + GRVINAL  PIDG   +      
Sbjct: 69  SKNVGVVLMGDGLMIQEGSSVKATARIAQIPVGEAYLGRVINALANPIDGRGEISASGFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVNTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 KLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKASQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|15895428|ref|NP_348777.1| flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824]
 gi|15025152|gb|AAK80117.1|AE007716_6 Flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824]
 gi|325509574|gb|ADZ21210.1| Flagellar-Type ATPase [Clostridium acetobutylicum EA 2018]
          Length = 438

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 165/431 (38%), Positives = 246/431 (57%), Gaps = 12/431 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQVIRINLDI 69
           +++          G ++ +  +   V  +  +V  G+  +   + N     +V+  N   
Sbjct: 10  ISQIRECKTEYVEGIVNKVVGLTIEVDGIKAFV--GEVCIIYNERNRPIKCEVVGFNEGR 67

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V + P+G  E IS G  V   G    +  S    G+V++ LG P+       K  +  ++
Sbjct: 68  VILMPLGELEGISPGCRVVQTGIPLSVKCSDELLGKVLDGLGAPL--RGEEVKSGVLYQL 125

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  + R+R++   +TG+R ID F     GQRIG+FAGSG+GKST L M AR    D
Sbjct: 126 DREPPDPLKRRRIKNSIETGVRAIDGFLTCGEGQRIGIFAGSGVGKSTTLGMIAREAKAD 185

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREV +FI +D   + +K+SV+V ATSD+  ++R     TA  IAEYF  
Sbjct: 186 VNVIALIGERGREVLDFIEKDLGEEGMKRSVIVCATSDKPALVRLKGAFTATAIAEYFRD 245

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           KG  V+L++DS+TRFA + RE+   +GE P  +GY  SVF+ LPRL+ER G +E   G+I
Sbjct: 246 KGKKVILMMDSVTRFAMAQREVGLATGEPPATKGYTPSVFAMLPRLMERSGMAET--GSI 303

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VLVDGD+ N+PIAD+VRSILDGHIVL+R+LA +  YP +D L+SVSRL  +   +
Sbjct: 304 TAFYTVLVDGDDFNEPIADAVRSILDGHIVLSRNLAAQNHYPAIDVLSSVSRLMSEIADS 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D KK       L+  +++  D+  IG Y  G +  +D A++    I  +LKQ   + SS 
Sbjct: 364 DHKKAAGLARDLLAEYKKNEDLINIGAYVKGTNNKVDAAINYNDRIISYLKQGIEEKSS- 422

Query: 428 DVFQEITKKLQ 438
             F+E    L+
Sbjct: 423 --FEESINSLK 431


>gi|308071149|ref|YP_003872754.1| ATP synthase subunit alpha [Paenibacillus polymyxa E681]
 gi|305860428|gb|ADM72216.1| ATP synthase alpha chain (Vegetative protein 100) [Paenibacillus
           polymyxa E681]
          Length = 504

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/400 (25%), Positives = 175/400 (43%), Gaps = 14/400 (3%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L + V  G+ V     ++  LG  + +    V +  +G   +I  G  V   
Sbjct: 36  DGIARVYGLEK-VMAGELVEF---DTGVLGLALNVEESNVGVVILGQFSDIREGGQVKRT 91

Query: 91  GRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G+   +       GRV+N LG+P+DG   +   +    + S+ P  M R+ V +  +TGI
Sbjct: 92  GQIMQVPVGEALIGRVVNPLGQPVDGKGPIATTEFR-PVESQAPGVMARKSVHEPMQTGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIE 207
           + ID   P+  GQR  +      GK+++      +   +  K I   +G++   V + +E
Sbjct: 151 KAIDAMVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGNGMKCIYVAIGQKQSTVAQVVE 210

Query: 208 DYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                   + ++VV A++ E   L  +AP +   + EYF  KG++VL++ D +T+ A + 
Sbjct: 211 TLRRHGALEYTIVVTASASEPSPLLYIAPYSGCAMGEYFMYKGEHVLVVYDDLTKQASAY 270

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPI 324
           RE++      P    YP  VF    RLLER      E   G++TA+  +     + +  I
Sbjct: 271 RELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGGGSLTALPFIETQASDVSAYI 330

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
             +V SI DG I L   L   G+ P ++   SVSR+   A     KK+  SL   + ++ 
Sbjct: 331 PTNVISITDGQIFLEADLFYAGQRPAINVGISVSRVGGSAQIKAMKKVAGSLRLDLAQYR 390

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           E +       +   +D      + +   + + LKQ  +  
Sbjct: 391 ELQ---AFSQFGSDLDKSTKARLDRGARMMEILKQGVNQP 427


>gi|226225734|ref|YP_002759840.1| flagellum-specific ATP synthase [Gemmatimonas aurantiaca T-27]
 gi|226088925|dbj|BAH37370.1| flagellum-specific ATP synthase [Gemmatimonas aurantiaca T-27]
          Length = 457

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 160/418 (38%), Positives = 242/418 (57%), Gaps = 10/418 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIG 78
              G ++ +  +    T +   V LG          D   L +V+  N   V + P+G  
Sbjct: 31  APYGRVTRVVGLVVEATGID--VGLGSLCRVTNHARDRSVLAEVVGFNERNVLLMPLGEL 88

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   GR F +       GRV+N LG PIDG   L   +  + + ++ P  + 
Sbjct: 89  DGLHAGASVQPLGRSFGVDVGPGLLGRVLNGLGHPIDGKGKLDTIE-RVSLSAEPPNPLQ 147

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +++  +TG+R ID    +  GQR+G+FAGSG+GKST+L M ARS   D  +I+L+GE
Sbjct: 148 RETIDRPMETGVRAIDGLLTIGRGQRVGIFAGSGVGKSTMLGMVARSAKADVNVIALLGE 207

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREF+      + L +SVV+VAT D++ ++R    L A  IAEYF  +G  VLL++
Sbjct: 208 RGREVREFLENSLGAEGLARSVVIVATGDQAALVRARGALVATAIAEYFRDQGKEVLLMV 267

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + REI   +GE P  +GYP SVF+ LPRLLER G  E  +G IT + +VLVD
Sbjct: 268 DSVTRVAMAWREIGLATGEPPTTKGYPPSVFANLPRLLERAGNGE--RGGITGIYTVLVD 325

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+P+AD+ RSILDGHIVL R LA +  +P +D L S SR+ D   +  +++  +++
Sbjct: 326 GDDFNEPVADAARSILDGHIVLTRRLAAQNHFPAIDVLDSKSRVKDHITNEAQRRSGAAM 385

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEI 433
             L   + E  D+ ++G Y+ G D  +D A+     + +FL+Q P +++   D +Q +
Sbjct: 386 LRLEAAYREKEDLIMVGAYQKGSDPYVDAAIAYRHRVLEFLQQRPDEITPYGDTYQAL 443


>gi|108773331|ref|YP_635886.1| CF1 alpha subunit of ATP synthase [Oltmannsiellopsis viridis]
 gi|110832064|sp|Q20EV9|ATPA_OLTVI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|82541913|gb|ABB81954.1| CF1 alpha subunit of ATP synthase [Oltmannsiellopsis viridis]
          Length = 498

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 100/424 (23%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E YS+ + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRQQIEQYSQEVKVVNVGTVFQVGDGIARIYGLEK-VMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GRV+NAL +PIDG   +   +
Sbjct: 67  LEAKNVGAVLMGTGLSVQEGSSVRATGKIAQIPVGEAYLGRVVNALARPIDGKGEISADE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TG+  +D   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESVAPGIITRRSVHEPMQTGLISVDAMIPIGRGQRELIIGDRQTGKTAIALDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   + + +           +++V AT++E   L+ +AP T   
Sbjct: 186 NQKGNGVICVYVAIGQKASSIAQVVTTLEERGSLDYTIIVSATANEPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYTGRHTLVIYDDLTKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L+  +      P ++   SVS
Sbjct: 306 NDELGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNANIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGKRLRELLK 422

Query: 419 QSPS 422
           Q+ +
Sbjct: 423 QAQN 426


>gi|91978136|ref|YP_570795.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB5]
 gi|91684592|gb|ABE40894.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB5]
          Length = 441

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 167/437 (38%), Positives = 258/437 (59%), Gaps = 7/437 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR 64
           + LA+   D     V   G +  +  +   +      + +G  +V + G +     +VI 
Sbjct: 2   KALAEQIGDIDG--VNIYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGASRTIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              +   + P    E +  G   V      ++ PS  W GRVINALG+PIDG   L +G 
Sbjct: 60  FTGNNAMVMPFAGLEGVRRGCRAVIANSAAQVRPSPAWLGRVINALGEPIDGKGPLPQGA 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M   +  PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMPFRNSPPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +      +I L+GERGREV+EF++ D   + L +SVVVVATSDE  ++R+ A    ++IA
Sbjct: 180 NVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLSIA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP  +
Sbjct: 240 EYFRDEGKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLR 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G I+ + +VLVDGD+HN+P+AD+VR ILDGHIV+ RS+AE GRYP ++ L SVSR   
Sbjct: 300 -EGTISGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRSIAERGRYPAINVLKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           ++       ++     ++  + +  ++  +G YRPG  + +D+AV     + +FL+Q+  
Sbjct: 359 RSADPAYLPVIKRARQVMATYADMEELIRLGAYRPGSSVEVDEAVRLHEPLEEFLRQAKD 418

Query: 423 DLSSEDV-FQEITKKLQ 438
           + +S    + ++ + L+
Sbjct: 419 EATSLSSGYAQLEQILK 435


>gi|295136946|ref|YP_003587779.1| ATP synthase CF1 alpha subunit [Lathyrus sativus]
 gi|293338668|gb|ADE43640.1| ATP synthase CF1 alpha subunit [Lathyrus sativus]
          Length = 510

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/430 (23%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  QIIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFKEG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   G   +I  S  + GRV+NAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLMIQEGSSVKATGIIAQIPVSEGYLGRVVNALAKPIDGRGEISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     V+     +G++   V + +           +++V  T++    L+ +AP T   
Sbjct: 186 NQQGQNVVCVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETANSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SCQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   ++      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSTDLEKTTQNQLARGQRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS S   + +
Sbjct: 423 QSQSSPITVE 432


>gi|160902213|ref|YP_001567794.1| ATP synthase F1, alpha subunit [Petrotoga mobilis SJ95]
 gi|189081307|sp|A9BFX5|ATPA_PETMO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160359857|gb|ABX31471.1| ATP synthase F1, alpha subunit [Petrotoga mobilis SJ95]
          Length = 504

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 181/432 (41%), Gaps = 16/432 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           M+ N + L ++ E+  K+     + + G++  ++        L + V   + V  +    
Sbjct: 1   MRVNPDELTKVIEERIKSYESGEIKEIGWVMQVSDGIVRAYGL-KDVMTNELVEIETSEG 59

Query: 57  D-NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           +   G  + +  D V I  +G  + I  GD +    R   +       GRV+N LG P+D
Sbjct: 60  EKIYGIAMNLEEDNVGIITLGDYKGIKEGDKLVRTNRIIEVPVGEKLLGRVVNPLGMPLD 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I  K    + R+ V+   +TG++V+D   P+  GQR  +      GK
Sbjct: 120 GKGEINTDDF-YPIERKAMGVVTRKPVDTPLQTGLKVLDALIPIGRGQRELIIGDRQTGK 178

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + + +    +        I   +G++   +   I++         +VVV A + +   L+
Sbjct: 179 TAIATDTIINQKGKNVFCIYVSIGQKSSGLARTIDNLEKYGAMDYTVVVAADASDPASLQ 238

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I EYF   G + L+I D +T+ A + REI+      P    YP  +F    
Sbjct: 239 YIAPYAGAAIGEYFMFNGKDALVIYDDLTKHAAAYREISLLLRRPPGREAYPGDIFYLHS 298

Query: 292 RLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +  GN   TA+  +    ++ +  I  +V SI DG I L   L   G  P
Sbjct: 299 RLLERASRLNENYGNGSLTALPIIETQANDISAYIPTNVISITDGQIYLETGLFNAGIRP 358

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A +   K++  SL   + ++ E         +   +D    K + +
Sbjct: 359 AVNIGLSVSRVGGDAQTKAMKRVAGSLKLDLAQYRELE---SFTQFAADLDEATKKQLTK 415

Query: 410 VPIIYDFLKQSP 421
              + + +KQ  
Sbjct: 416 GEKLTELMKQPQ 427


>gi|50058603|gb|AAT69054.1| F1-ATPase alpha subunit [Rapona tiliifolia]
          Length = 430

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDGLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|50058633|gb|AAT69069.1| F1-ATPase alpha subunit [Montinia caryophyllacea]
          Length = 430

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|61417391|gb|AAX46318.1| F1-ATPase alpha subunit [Cuscuta campestris]
          Length = 429

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|139387459|ref|YP_001122813.1| ATP synthase CF1 alpha subunit [Phaseolus vulgaris]
 gi|190358193|sp|A4GGB2|ATPA_PHAVU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|112030981|gb|ABH88093.1| ATP synthase CF1 alpha subunit [Phaseolus vulgaris]
 gi|158187142|gb|ABW22775.1| ATP synthase CF1 alpha subunit [Phaseolus vulgaris]
          Length = 510

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y+  + +V  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIEQYNTEVKIVNTGTVLQVGDGIARIYGLDE-VMAGELVEFEEG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I  S  +  RVINAL KPIDG   +   +
Sbjct: 67  LESKNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLSRVINALAKPIDGRGEILASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     VG++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAVGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|254369897|ref|ZP_04985906.1| ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122867|gb|EDO66984.1| ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 513

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNLVELKSEGTIVSVADGIVTIYGLND-VTAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|55824798|gb|AAV66481.1| F1-ATPase alpha subunit [Jovellana sp. JPM-2004]
          Length = 424

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G    +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 405


>gi|60117210|ref|YP_209544.1| ATP synthase CF1 alpha subunit [Huperzia lucidula]
 gi|75286699|sp|Q5SCX6|ATPA_HUPLU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|50660018|gb|AAT80740.1| ATP synthase CF1 alpha subunit [Huperzia lucidula]
          Length = 507

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/421 (23%), Positives = 180/421 (42%), Gaps = 14/421 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
             Q+ +   +  V   G +  +      +  L++ V  G+ V  +      +G  + +  
Sbjct: 14  FRQIEQYNQEVRVFNIGTVLQVGDGIARIYGLNE-VMAGELVEFEDG---TVGIALNLES 69

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +  +
Sbjct: 70  NNVGAVLMGDGLTIQEGSSVKATGKIAQIPVSDAYLGRVVNALAQPIDGKGQIPASESRL 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I S  P  ++R+   +  +TG+  ID   P+  GQR  +      GK+ + +    +  
Sbjct: 130 -IESPAPGIISRRSAYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQK 188

Query: 187 FDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAE 243
              VI     +G++   V + +  +        ++VV  T++    L+ +AP T   +AE
Sbjct: 189 GQNVICVYVAIGQKASSVAQVVNTFEEQGAMEYTIVVAETANSPATLQYLAPYTGAALAE 248

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      +
Sbjct: 249 YFMYRQQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQ 308

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G++TA+  V     + +  I  +V SI DG   L+   +  G  P ++   SVSR+ 
Sbjct: 309 LGEGSMTALPVVETQAGDVSAYIPTNVISITDGQTFLSADSSNAGIRPAINVGISVSRVG 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++   L   + +F E         +   +D      + +   + + LKQS 
Sbjct: 369 SAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQSQ 425

Query: 422 S 422
           S
Sbjct: 426 S 426


>gi|27468620|ref|NP_765257.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis ATCC
           12228]
 gi|57867651|ref|YP_189276.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis RP62A]
 gi|251812182|ref|ZP_04826655.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876487|ref|ZP_06285353.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis SK135]
 gi|293366069|ref|ZP_06612757.1| ATP synthase F1 sector alpha subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38604811|sp|Q8CNJ5|ATPA_STAES RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81170377|sp|Q5HMB7|ATPA_STAEQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|27316167|gb|AAO05301.1|AE016749_247 ATP synthase alpha chain [Staphylococcus epidermidis ATCC 12228]
 gi|57638309|gb|AAW55097.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis RP62A]
 gi|251804279|gb|EES56936.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294739|gb|EFA87267.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis SK135]
 gi|291319792|gb|EFE60150.1| ATP synthase F1 sector alpha subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329734129|gb|EGG70447.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU045]
          Length = 503

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 182/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G  EEIS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYEEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP + VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    K + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAKKLARGERTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q  ++    +
Sbjct: 422 QGQNNPLPVE 431


>gi|170690593|ref|ZP_02881760.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia graminis C4D1M]
 gi|170145028|gb|EDT13189.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia graminis C4D1M]
          Length = 464

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 165/438 (37%), Positives = 248/438 (56%), Gaps = 11/438 (2%)

Query: 6   ETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQ 61
           E LA   E    S   + + G +  +      V  L   V LG+    +  N + L   +
Sbjct: 29  ERLADAIEHEILSTASIARTGKVLEVIGTLVKVAGLD--VTLGELCELRAANGELLQHAE 86

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI    D+  + P     +IS    V   GR   +       GRVI++LG+PIDG   L 
Sbjct: 87  VIGFTRDVALLSPFSRLADISRSTRVVGLGRSLTVPVGDALLGRVIDSLGEPIDGLGPLD 146

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +    + +  P  M+R+ ++    TG+R++D    L  GQR+G+FA +G+GKSTLL M
Sbjct: 147 TIE-ERPVFANPPSPMSRRMIDTPLATGVRIVDGMMTLAEGQRMGIFAPAGVGKSTLLGM 205

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
           FAR    D  +I+L+GERGREVREF+E  LG + + +S+VV ATSD S I R  A   A 
Sbjct: 206 FARGAQCDVTVIALIGERGREVREFVELILGPEGMARSIVVCATSDRSSIERAKAAYVAT 265

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE+F  +G  VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G 
Sbjct: 266 AIAEHFRDRGQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGM 325

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+ITA+ +VL + ++ NDPIA+ VR I+DGH++L+R +A + +YP +D LAS+SR
Sbjct: 326 GE--HGSITALYTVLAEDESGNDPIAEEVRGIVDGHMILSREIAAKNQYPAIDVLASLSR 383

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +  + D  +    L  L+ +  E   +  IG Y+PG + + D+A+ ++  I  F  Q
Sbjct: 384 VMPQVMTPDYVRAAGRLRELLAKHREVEMLLQIGEYQPGGNPLADEAIRKIDAIRAFFNQ 443

Query: 420 SPSDLSSEDVFQEITKKL 437
           +  +L++    +    +L
Sbjct: 444 ATHELAAPQDTEARLFQL 461


>gi|86751019|ref|YP_487515.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris HaA2]
 gi|86574047|gb|ABD08604.1| ATPase FliI/YscN [Rhodopseudomonas palustris HaA2]
          Length = 441

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 164/437 (37%), Positives = 255/437 (58%), Gaps = 7/437 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR 64
           + LA+   D     V   G +  +  +   +      + +G  +V + G + +   +VI 
Sbjct: 2   KALAEQIGDIDG--VNIYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGGDRNIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              +   + P    E +  G   V      ++ PS  W GRVINALG+PIDG   L +G 
Sbjct: 60  FTGNNAMVMPFAGLEGVRRGCRAVIANSAAQVRPSQAWLGRVINALGEPIDGKGPLPQGP 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M   +  PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMRFRNTPPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +      +I L+GERGREV+EF++ D   + + +SVVVVATSDE  ++R+ A    ++IA
Sbjct: 180 NVDAAVSVIGLIGERGREVQEFLQDDLGEEGMARSVVVVATSDEPALMRRQAAYLTLSIA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP   
Sbjct: 240 EYFRDEDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLG 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G I+ + +VLVDGD+HN+P+AD+VR ILDGHIV+ RS+AE GR+P ++ L SVSR   
Sbjct: 300 -EGTISGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRSIAERGRFPAINVLKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           ++       ++     ++  + +  ++  +G YRPG    +D+AV     + +FL+Q   
Sbjct: 359 RSADPAYLPVIKRARQVMATYADMEELIRLGAYRPGSSAEVDEAVRLHEPLEEFLRQGKD 418

Query: 423 DLSSEDV-FQEITKKLQ 438
           + +S    + ++ + L+
Sbjct: 419 EATSLSAGYLQLEQILK 435


>gi|23100432|ref|NP_693899.1| F0F1 ATP synthase subunit alpha [Oceanobacillus iheyensis HTE831]
 gi|81745357|sp|Q8EM81|ATPA_OCEIH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|22778665|dbj|BAC14933.1| H(+)-transporting ATP synthase alpha chain [Oceanobacillus
           iheyensis HTE831]
          Length = 503

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 108/433 (24%), Positives = 178/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N E ++ L +   +N      V   G +  +         L      G+ +      
Sbjct: 1   MSINAEEISTLIKQQIENFDSDIEVSDVGTVIEVGDGIARAHGL-DNAMAGELLEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +    V I  +G   EI  GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --VMGLAQNLEESNVGIVILGPYTEIKEGDEVRRTGRIMQVPVGEELLGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +   +  I +  P  M+R+ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETSKTRPIEAAAPGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +T+   ++  + D     I   +G++   VR  +E +      + ++VV A + +   L 
Sbjct: 176 TTVAVDTILNQKDQDMICIYVAIGQKESTVRNTVETFRKHGALENTIVVTAGASDPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P   V + E F   G +VL+I D +++ A + RE++      P    +P  VF    
Sbjct: 236 YLSPYAGVAMGEEFMYNGKHVLVIYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  V     +    I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDAKGGGSLTALPFVETQAGDIAAYIPTNVISITDGQIFLQSDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++P  SVSR+   A     KK+  +L   +  F E         +   +D      +++
Sbjct: 356 AINPGLSVSRVGGSAQIKAMKKVAGTLRLDLASFRELE---AFSQFGSDLDKSTQAKLNR 412

Query: 410 VPIIYDFLKQSPS 422
                + LKQ   
Sbjct: 413 GQRTVEVLKQGLH 425


>gi|186477775|ref|YP_001859245.1| F0F1 ATP synthase subunit alpha [Burkholderia phymatum STM815]
 gi|184194234|gb|ACC72199.1| ATP synthase F1, alpha subunit [Burkholderia phymatum STM815]
          Length = 513

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 109/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSE-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NVYGLALNLERDSVGAVILGEYENISEGDIVKTTGRILEVPVGPELIGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|189347805|ref|YP_001944334.1| F0F1 ATP synthase subunit alpha [Chlorobium limicola DSM 245]
 gi|226739856|sp|B3EHU6|ATPA_CHLL2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189341952|gb|ACD91355.1| ATP synthase F1, alpha subunit [Chlorobium limicola DSM 245]
          Length = 526

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 98/445 (22%), Positives = 173/445 (38%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      AE Y        G +  +      V  LS  V  G+ +    K    +G
Sbjct: 14  LRKQLAGFESEAEVYD------VGTVLQVGDGIARVYGLS-LVAAGELLEFPNK---VMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G    +  GD V        +       GRV+  LG+PIDG  S+
Sbjct: 64  MALNLEEDNVGCVLFGESNTVKEGDTVRRTNILASVPVGEAMLGRVVTPLGEPIDGKGSI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            + ++ + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 -ETEIRVPLERRAPGVIFRKSVHEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAVAI 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G +G  V + +           + V+ AT+ +   L+ +AP 
Sbjct: 183 DTIINQKGKGVFCIYVAIGLKGSTVAQVVNTLEKYGAMEYTTVISATASDPAPLQFIAPF 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               + EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGAALGEYFRDTGRHALVVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIEVARKMNDLPDALKPLVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNSGQRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKTTKAQLDRGARLVEILKQGQ 444


>gi|290790709|gb|ADD62967.1| ATP synthase CF1 alpha subunit [Oryza australiensis]
          Length = 533

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 36  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 91

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 92  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 151

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 152 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 210

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 211 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 270

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 271 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 330

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 331 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 390

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 391 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 447

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 448 KQSQANPLPVEEQIATI 464


>gi|224419099|ref|ZP_03657105.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253828036|ref|ZP_04870921.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|313142608|ref|ZP_07804801.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|253511442|gb|EES90101.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
 gi|313131639|gb|EFR49256.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT
           98-5491]
          Length = 432

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 175/433 (40%), Positives = 254/433 (58%), Gaps = 9/433 (2%)

Query: 7   TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           +LA L E  +  NL    G I+ +   + +   LS    LGD V    +NS+ +G V  +
Sbjct: 2   SLANLRERLNHLNLSPTFGLITKVEQGFLSANGLSP--SLGDIVRIVSENSNTIGMVTTL 59

Query: 66  NLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
                 I P    E   +GD V+ +    +I       GRVIN LG+PIDG   L + + 
Sbjct: 60  EGGSFKITPFSFVEGTKVGDKVYLNTKGLQIPVGLELLGRVINPLGEPIDGKGDL-RAEG 118

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            M I+ +   AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R 
Sbjct: 119 VMPIIRQPIAAMKRGMIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRG 178

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                 +I+L+GERGREV EF+E  LG +L  +V++VATSD+SP++RK     A+++AEY
Sbjct: 179 AQAKIKVIALIGERGREVPEFVEKNLGGDLTNTVLIVATSDDSPLMRKYGAFAAMSVAEY 238

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F +KG++VL ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E  K
Sbjct: 239 FKAKGEDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAGKEEG-K 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+RSL + G YPP++ L S SRL +  
Sbjct: 298 GSITAYFTVLVEGDDMSDPIADQSRSILDGHIVLDRSLTDFGIYPPINILNSASRLMNDI 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +          L    +E   +  IG Y+ G D  +D+A+ +   + D+L+QS  ++
Sbjct: 358 AQKEHILAARKFRRLYSILKENEVLIRIGAYQAGSDKEMDEAIAKKEDMEDYLRQSYDEV 417

Query: 425 SSEDVFQEITKKL 437
                +QE TKKL
Sbjct: 418 WD---YQESTKKL 427


>gi|195488017|ref|XP_002092136.1| GE14023 [Drosophila yakuba]
 gi|194178237|gb|EDW91848.1| GE14023 [Drosophila yakuba]
          Length = 552

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          SV+V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 244 IYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 474


>gi|6561610|gb|AAF16954.1|AF197622_1 ATPase alpha subunit [Acorus gramineus]
          Length = 422

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 175/417 (41%), Gaps = 22/417 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V          G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVDGLNE-IQAGEMVEFSNG---VQGIALNLENENVGIVIFGSDTAIKE 57

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDYE-RKRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVII 192
           +  +TG++ +D   P+  GQR  +      GK+ +          L+           + 
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGNEQEKLYCVY 176

Query: 193 SLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++       L+ S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 177 VAIGQKRSTVAQLVQILSANQALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 236

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 237 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERASKRSDQTGAGSLTA 296

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     
Sbjct: 297 LPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAM 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           K++  SL   + ++ E   +     +   +D      +++   + + LKQ   +  +
Sbjct: 357 KQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTEVLKQPQYEPLT 410


>gi|329735642|gb|EGG71925.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU028]
          Length = 503

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 182/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G  EEIS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYEEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP + VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    K + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAKKLARGERTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q  ++    +
Sbjct: 422 QGQNNPLPVE 431


>gi|319399589|gb|EFV87844.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis FRI909]
          Length = 503

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 182/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G  EEIS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYEEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP + VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    K + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAKKLARGERTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q  ++    +
Sbjct: 422 QGQNNPLPVE 431


>gi|255262420|ref|ZP_05341762.1| ATP synthase F1, alpha subunit [Thalassiobium sp. R2A62]
 gi|255104755|gb|EET47429.1| ATP synthase F1, alpha subunit [Thalassiobium sp. R2A62]
          Length = 511

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 182/441 (41%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MAIQAAEISAILKDQIKNFGKEAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IQGMALNLESDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGEALLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K         K P  + R+ V +   TG++ +D   P+  GQR  +     IGK
Sbjct: 117 GKGPI-KTKTRRVADVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQIGK 175

Query: 175 -----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
                  +L+  + +D           +   +G++   V + ++       ++ S+VV A
Sbjct: 176 TAIALDAILNQKSYNDAAKSDSDKLYCVYVAIGQKRSTVAQLVKKLEETGAIEYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP  A  +AE F   G + L++ D +T+ A S R+++      P    Y
Sbjct: 236 TASDPAPMQFLAPYAATAMAEEFRDNGKHALIVYDDLTKQAVSYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSCKLNEDYGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLES 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D
Sbjct: 356 ELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
               + +++   + + +KQ  
Sbjct: 413 AATQQLLNRGARLTELMKQPQ 433


>gi|242241511|ref|ZP_04795956.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis W23144]
 gi|242235054|gb|EES37365.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis W23144]
          Length = 503

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 182/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G  EEIS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYEEISEGDEVKRTGRIMEVPVGEEMIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP + VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    K + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAKKLARGERTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q  ++    +
Sbjct: 422 QGQNNPLPVE 431


>gi|154252622|ref|YP_001413446.1| flagellum-specific ATP synthase [Parvibaculum lavamentivorans DS-1]
 gi|154156572|gb|ABS63789.1| flagellar protein export ATPase FliI [Parvibaculum lavamentivorans
           DS-1]
          Length = 445

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 180/429 (41%), Positives = 258/429 (60%), Gaps = 10/429 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           MQ  L  +  LA+      V   G + SI  +   V      + +G  + V      + +
Sbjct: 1   MQALLAEIGALAD------VKHYGRVVSIQGLMVEVAGPLHAMGVGSRLNVSNRAGEEVI 54

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+    +     P G    I +G   V       + PS+ W GRV+NA+G+P+DG   
Sbjct: 55  CEVVGFRDNKALCLPFGALAGIGVGCKAVLSSEEPHVYPSSAWLGRVVNAMGEPMDGKGP 114

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +G     + +  PPA  RQRV      G+R ++ FT  C GQR+G+FAGSG+GKS LL
Sbjct: 115 IAQGAQPYLLRNMPPPAHTRQRVRGKIDLGVRALNTFTTCCRGQRMGIFAGSGVGKSVLL 174

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
           SM AR+   D  +I L+GERGREV+EFIED LG + L +SVVVVATSDE  ++R+ A   
Sbjct: 175 SMLARNTACDVSVIGLIGERGREVQEFIEDDLGPEGLARSVVVVATSDEPALMRRQAAYL 234

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +++AEYF  +  NVL ++DS+TRFA + REI  ++GE P ++GY  +VF+ELP+LLER 
Sbjct: 235 TLSLAEYFRDRDQNVLCMMDSVTRFAVAQREIGLSTGEPPTSKGYTPTVFAELPKLLERA 294

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP     GNIT + +VLVDGD+HN+P+AD+VRSILDGHIV+ RS+AE GRYP ++ L SV
Sbjct: 295 GPGTG-SGNITGLFTVLVDGDDHNEPVADAVRSILDGHIVMERSIAERGRYPAINVLKSV 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR       A+E +L+     L+  +++  ++  +G YRPG D  +D+A+   P +  FL
Sbjct: 354 SRTMPDCNEAEENELIRRARALMATYDDMEELIRLGAYRPGSDPQVDEAIFYQPALEAFL 413

Query: 418 KQSPSDLSS 426
            Q+  D SS
Sbjct: 414 AQNKHDASS 422


>gi|50058623|gb|AAT69064.1| F1-ATPase alpha subunit [Cuscuta europaea]
          Length = 430

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|6561646|gb|AAF16990.1|AF197658_1 ATPase alpha subunit [Xanthorhiza simplicissima]
          Length = 421

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 405


>gi|295399812|ref|ZP_06809793.1| flagellar protein export ATPase FliI [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978215|gb|EFG53812.1| flagellar protein export ATPase FliI [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 426

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 240/424 (56%), Gaps = 12/424 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL---GQVIRINLDIVYICPVGI 77
           + G +S +  +   +        +GD   +H G          +V+      V + P   
Sbjct: 6   RFGKVSRVIGLM--IEAKGPESSVGDICYIHTGSGKQKQMIAAEVVGFKEQHVLLMPFST 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + IS G +V   G+  +I       G+V+++LG P+DG   L KG   + I    P  +
Sbjct: 64  VQHISPGCIVEATGKPLQIRVGFPLIGKVLDSLGYPLDGS-PLSKGLQPISIERNPPNPL 122

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  + +  + G+RVID    +  GQR+G+FAGSG+GKSTL+ M AR    D  +I+L+G
Sbjct: 123 ARPPISEPIEVGVRVIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNADINVIALIG 182

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFI  D   + L +S+VVVATSD+  ++R     TA  IAEYF  +G +V+ +
Sbjct: 183 ERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRDQGMDVMFM 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +    G ITA  +VLV
Sbjct: 243 MDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTGTNA--CGTITAFYTVLV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGH+VL RSLA +G+YP ++ L SVSR+ +   S + ++    
Sbjct: 301 DGDDMNEPIADTVRGILDGHLVLERSLANKGQYPAINVLKSVSRVMNHIISPEHRQAADK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEIT 434
           L  L+  +  + D+  IG Y+ G    +D+A+   P I  F KQ   + +++D   + + 
Sbjct: 361 LRQLLSTYINSEDLINIGAYKRGSSKEIDEAIRYYPEIISFCKQDIDEKATKDESIETLL 420

Query: 435 KKLQ 438
           + +Q
Sbjct: 421 RLMQ 424


>gi|187777255|ref|ZP_02993728.1| hypothetical protein CLOSPO_00807 [Clostridium sporogenes ATCC
           15579]
 gi|187774183|gb|EDU37985.1| hypothetical protein CLOSPO_00807 [Clostridium sporogenes ATCC
           15579]
          Length = 504

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 184/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E ++ N+  V  G I  I      V  L Q    G+ +       D  G  + 
Sbjct: 10  SIIKQQIEKFNTNVETVDSGTIIQIGDGIARVYGL-QDCMEGELIEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G++V   G+   +       GRV+N+LG  IDG   +   +
Sbjct: 66  LEQDNVGCVLLGSEEGIKEGNVVKRTGKVVEVPVGEALVGRVVNSLGMAIDGKGPVLTNE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  + P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRAVEVQAPGVIDRQSVKEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTAIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V   + D         ++VV +T+ +S  L+ ++P    +
Sbjct: 185 NQKDNDVICIYVAIGQKQSTVAHIVNDLTKMGAMDYTIVVSSTASDSAPLQYLSPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHKGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSRLLERSARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G++TA+  V     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SEKLGGGSLTALPIVETLAGDVTAYIPTNVISITDGQIFLEADLFNAGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVAGTLRLDLAQYRE---LAAFSQFGSDLDKESVKRLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|126725127|ref|ZP_01740970.1| F0F1 ATP synthase subunit alpha [Rhodobacterales bacterium
           HTCC2150]
 gi|126706291|gb|EBA05381.1| F0F1 ATP synthase subunit alpha [Rhodobacterales bacterium
           HTCC2150]
          Length = 512

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 182/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGKDAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V        +       GRV++ LG P+D
Sbjct: 59  --IQGMALNLEADNVGVVIFGSDRDIKEGDTVKRTNSIVDVPVGDALLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K         K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTKTRSIADQKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +      +                  I   +G++   V + ++       ++ S+VV 
Sbjct: 176 TAVALDAILNQKSYNAAAGDDENKKLYCIYVAIGQKRSTVAQLVKKLEETGAIEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A ++AE+F   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATSMAEHFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSSKLNEDNGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNSMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ+     +
Sbjct: 413 DAATQQLLNRGARLTELMKQAQYSPLT 439


>gi|123969185|ref|YP_001010043.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str.
           AS9601]
 gi|158512722|sp|A2BT25|ATPA_PROMS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123199295|gb|ABM70936.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str.
           AS9601]
          Length = 505

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY +++ V   G +  I      +  L Q V  G+ +  +       G  + 
Sbjct: 11  SILKQQITDYDQSVSVSNVGTVLQIGDGIARIYGLDQ-VMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    +  G  V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 67  LEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMQGRVVNPLGQPIDGKGEIPTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V +  +TGI  ID   P+  GQR  +      GKS +      
Sbjct: 127 TRL-IEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKSAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E          +VVV A + E   L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKSASVANIVEVLRERGALDYTVVVSAGASEPAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|288942633|ref|YP_003444873.1| flagellar protein export ATPase FliI [Allochromatium vinosum DSM
           180]
 gi|288898005|gb|ADC63841.1| flagellar protein export ATPase FliI [Allochromatium vinosum DSM
           180]
          Length = 461

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 160/439 (36%), Positives = 242/439 (55%), Gaps = 9/439 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  L    Q  ED         G +S +  +      +   V  G   +H    +    
Sbjct: 20  LRDRLARSRQRIEDVPAP--QPEGRLSRMVGMTLEAEGIRLPVG-GRAAIHTANGTRLGA 76

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +  ++ P G  E ++ G  +    + R I       GRV++ALGKP+DG   +
Sbjct: 77  EVVGFQGERTFLMPEGKLEGLAPGARIEPLEQARRIPVGPALLGRVVDALGKPLDGGGPI 136

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +++  I  +    + R  V +    GIR ++    +  GQRIG+FAGSG+GKS LL 
Sbjct: 137 RTAEMA-PIEGRPINPLGRVPVTEPLDVGIRALNGLLSVGRGQRIGLFAGSGVGKSVLLG 195

Query: 180 MFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D +++ L+GERGREV EFI D    ++ K++VVV   +D+SP+LR+     +
Sbjct: 196 MMTRHTAADVIVVGLIGERGREVNEFIYDILDEESRKRTVVVAVPADQSPLLRQHGAWVS 255

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIAE F  +G NVLL++DS+TRFA   REIA   GE P  +GY  SVF+ LP+L+ER G
Sbjct: 256 TTIAESFRDRGLNVLLLMDSLTRFAQGAREIAMAIGEPPATKGYSASVFARLPQLVERAG 315

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +K  G+ITA  +VL +GD+ NDPI DS R+ILDGH+VL+R +AE GRYP +D  ASVS
Sbjct: 316 NGDKGGGSITAFYTVLAEGDDQNDPIVDSARAILDGHVVLSREIAETGRYPAIDVGASVS 375

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     + + +K      +L+  +   RD+  +G YR G D  LD+AV   P +  +L 
Sbjct: 376 RVMSAVVTPEHQKAAYRFRNLMSTYARNRDLIAVGAYRKGSDPQLDEAVAMNPRLEAYLG 435

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q+  + +S   F++  ++L
Sbjct: 436 QNRLEKAS---FEDSRRQL 451


>gi|134096554|ref|YP_001101629.1| F0F1 ATP synthase subunit alpha [Herminiimonas arsenicoxydans]
 gi|158513611|sp|A4GAH1|ATPA_HERAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|133740457|emb|CAL63508.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
           sector subunit alpha) [Herminiimonas arsenicoxydans]
          Length = 511

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 190/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLGESAEIRNQGTVISVSDGICRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR    P      GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPIGPELRGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTAPIEKIAPGVIARQSVDQPMQTGIKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +     V  I   +G++   V+  +           ++VV AT+ ES  ++
Sbjct: 176 TAVAIDAIINQKGQNVTCIYVAIGQKASSVKNIVRSLEQHGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +   + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 FVSAYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETSLFNSGIRPAINAGISVSRVGGAAQTKVIKGLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + LKQ+     S
Sbjct: 413 LDASTRKQLDRGARVTELLKQAQYAPLS 440


>gi|323702634|ref|ZP_08114296.1| ATP synthase F1, alpha subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|323532453|gb|EGB22330.1| ATP synthase F1, alpha subunit [Desulfotomaculum nigrificans DSM
           574]
          Length = 501

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 101/432 (23%), Positives = 168/432 (38%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLA----QLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++    Q  + Y   L V   G +  +      V  L +     + +   G  
Sbjct: 1   MNLRPEEISSIIRQQIDKYEAQLEVSDVGTVIQVGDGIARVYGL-EDCMASELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G  + +  D +    +G    I  GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --TMGMALNLEEDNIGCVILGPYTHIKEGDPVKRTGRIISVPVGEALIGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D         P  + R+ V    +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTDKFRATERIAPGVITRKSVSVPLQTGIKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +     VI     +G++   V   ++          ++VV A + E   L 
Sbjct: 176 TAVAVDTIINQKGQNVICIYVAIGQKASTVAGVVQTLENHGAMEYTIVVAANASEPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL++ D +++ A + RE++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEEFMDNGKDVLIVYDDLSKQAAAYREMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPS--EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAARLAPEYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++   L   + ++ E   +     +   +D      +++
Sbjct: 356 AISVGLSVSRVGGAAQIKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDKATQARLNR 412

Query: 410 VPIIYDFLKQSP 421
                  LKQ  
Sbjct: 413 GARTVQILKQGQ 424


>gi|195029787|ref|XP_001987753.1| GH19785 [Drosophila grimshawi]
 gi|193903753|gb|EDW02620.1| GH19785 [Drosophila grimshawi]
          Length = 550

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 67  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 122

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  +L   D    +  K P  + R  
Sbjct: 123 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGALKTKD-RFRVGIKAPGIIPRVS 181

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 182 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAQDESKKLYC 241

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          SV+V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 242 IYVAIGQKRSTVAQIVKRLTDSGAMDYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 301

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 302 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 361

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 362 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 421

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 422 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 472


>gi|331270435|ref|YP_004396927.1| ATP synthase F1 subunit alpha [Clostridium botulinum BKT015925]
 gi|329126985|gb|AEB76930.1| ATP synthase F1, alpha subunit [Clostridium botulinum BKT015925]
          Length = 502

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 183/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   +  V  G I  I      V  + +    G+ +       D  G  + 
Sbjct: 10  SIIRKQIESYEHKIQTVDSGTIIQIGDGIARVYGI-EDCMEGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  GD+V   GR   +       GRV+NALG+P+DG   + K  
Sbjct: 66  LEQDNVGCVLLGPEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLDGKGPI-KCT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  + P  ++RQ V++  +TGI+ ID   P+  GQR  +     IGK+ +      
Sbjct: 125 QTRAIELEAPGVIDRQSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V   +           ++VV +T+ +S  L+ ++P +  +
Sbjct: 185 NQKCKNVKCIYVAIGQKQSTVAHIVNTLTEMGAMDYTIVVSSTASDSAPLQFLSPYSGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG++VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SDKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQKPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    + + +   + + L 
Sbjct: 365 RVGGNAQIKAMKQVSGTLRLELAQYRE---LAAFAQFGSDLDNASKERLEKGKRLVEILN 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QDQYNP 427


>gi|157414052|ref|YP_001484918.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9215]
 gi|254525429|ref|ZP_05137481.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9202]
 gi|166990359|sp|A8G6V1|ATPA_PROM2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157388627|gb|ABV51332.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9215]
 gi|221536853|gb|EEE39306.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9202]
          Length = 505

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY +++ V   G +  I      +  L Q V  G+ +  +       G  + 
Sbjct: 11  SILKQQITDYDQSVSVSNVGTVLQIGDGIARIYGLDQ-VMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    +  G  V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 67  LEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMQGRVVNPLGQPIDGKGEIPTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V +  +TGI  ID   P+  GQR  +      GKS +      
Sbjct: 127 TRL-IEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKSAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E          +VVV A + E   L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKSASVANIVEVLRERGALDYTVVVSAGASEPAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|300697472|ref|YP_003748133.1| type III secretion system ATPase [Ralstonia solanacearum CFBP2957]
 gi|299074196|emb|CBJ53741.1| type III secretion system ATPase [Ralstonia solanacearum CFBP2957]
          Length = 439

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 159/437 (36%), Positives = 239/437 (54%), Gaps = 11/437 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQV 62
           LE+L   A   +  L+ + G +  +T     V  +   V LG+       +   +  G+V
Sbjct: 7   LESLESAA--RTTPLIRRFGKVVEVTGTLLRVGGVD--VRLGELCTLTEADGTVMQEGEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  +     + P      +S    V   GR   +   A   GRV++ LG+P DG   L  
Sbjct: 63  VGFSEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGAGLLGRVLDGLGRPADGGPPLDV 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            +  + + +  P  M R+ VE    TG+RVID    L  GQR+G+FA +G+GKSTL+ MF
Sbjct: 123 VE-HVPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMF 181

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I L+GERGREVREFI +    + +++SVVV ATSD S + R  A      
Sbjct: 182 ARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAHVGTA 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G S
Sbjct: 242 VAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMS 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L S+SR+
Sbjct: 302 ST--GSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRV 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +       +  L+ ++ E   +  +G Y+ G D + D AV     + +FL+Q 
Sbjct: 360 MTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMEEFLRQR 419

Query: 421 PSDLSSEDVFQEITKKL 437
             +  S D  + +  ++
Sbjct: 420 TDEWCSPDETRRLLDEI 436


>gi|163742887|ref|ZP_02150271.1| F0F1 ATP synthase subunit alpha [Phaeobacter gallaeciensis 2.10]
 gi|161383851|gb|EDQ08236.1| F0F1 ATP synthase subunit alpha [Phaeobacter gallaeciensis 2.10]
          Length = 512

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 180/442 (40%), Gaps = 29/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V I   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLEADNVGIVIFGSDRDIKEGDTVKRTNSIVDVPAGPELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAKERKVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           + +      +                  +   +G++   V + ++          S+VV 
Sbjct: 176 TAVALDAILNQKVYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEETGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   ++ +AP  A  +AEYF   G + L++ D +++ A + R+++      P    
Sbjct: 236 ATASEPAPMQFLAPYAATAMAEYFRDSGKHALIVYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     +E   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEEFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +++   + + +KQ  
Sbjct: 413 DAATQQLLNRGARLTELMKQPQ 434


>gi|149202399|ref|ZP_01879372.1| F0F1 ATP synthase subunit alpha [Roseovarius sp. TM1035]
 gi|149144497|gb|EDM32528.1| F0F1 ATP synthase subunit alpha [Roseovarius sp. TM1035]
          Length = 512

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 183/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQDAEVAEIGRVLSVGDGIARVHGL-DNVQAGELVEFPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLESDNVGVVIFGSDRDIKEGDTVKRTKSIVDVPIGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K         K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTKTRGLADVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +      +                  +   VG++   V + ++       +K S+VV 
Sbjct: 176 TAVALDAILNQKIYNEAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEESGAIKYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP +A  +AE+F   G + L++ D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYSATAMAEHFRDNGRHALIVYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     S+   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNSDNGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|119896449|ref|YP_931662.1| F0F1 ATP synthase subunit alpha [Azoarcus sp. BH72]
 gi|158512903|sp|A1K1S0|ATPA_AZOSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119668862|emb|CAL92775.1| ATP synthase alpha chain [Azoarcus sp. BH72]
          Length = 512

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 104/448 (23%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL         G + S+T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKSRIQNLQLAATSRNEGTVVSVTDGITRIHGLTD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHITEGDTVKATGRILEVPVGPELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + RQ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTDKIEKVAPGVIARQSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +     +     ++VV AT+ ES  ++
Sbjct: 176 TAVAVDAIINQKGQNMFCVYVAIGQKASTIANVVRKLEENGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G + L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ      S
Sbjct: 413 LDDATRKQLERGRRVTELMKQPQYAPLS 440


>gi|52082215|ref|YP_081006.1| F0F1 ATP synthase subunit alpha [Bacillus licheniformis ATCC 14580]
 gi|52787606|ref|YP_093435.1| F0F1 ATP synthase subunit alpha [Bacillus licheniformis ATCC 14580]
 gi|319648088|ref|ZP_08002305.1| ATP synthase subunit alpha [Bacillus sp. BT1B_CT2]
 gi|81608869|sp|Q65DX2|ATPA_BACLD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|52005426|gb|AAU25368.1| ATP synthase (subunit alpha) [Bacillus licheniformis ATCC 14580]
 gi|52350108|gb|AAU42742.1| AtpA [Bacillus licheniformis ATCC 14580]
 gi|317389723|gb|EFV70533.1| ATP synthase subunit alpha [Bacillus sp. BT1B_CT2]
          Length = 502

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 174/422 (41%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E+Y   + V   G +  +      V  L      G+ V         LG    + 
Sbjct: 12  IKQQIENYQSEIEVHDVGTVIQVGDGIARVHGL-DNCMAGELVEFSNG---VLGLAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   +     +
Sbjct: 68  ESNVGIVILGPYKDIREGDEVKRTGRIMEVPVGEELLGRVVNPLGQPVDGMGPVLTSK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++  +
Sbjct: 127 RPIESPAPGVMDRKSVHEPLQTGIKSIDALIPIGRGQRELIIGDRQTGKTSIAIDTILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     I   +G++   VR  +E          ++VV A++ +   L  +AP   V + 
Sbjct: 187 KDQDMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVAMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER      
Sbjct: 247 EEFMYNGKHVLVVYDDLSKQATAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  V     + +  I  +V SI DG I L   L   G  P V+P  SVSR+
Sbjct: 307 AKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAVNPGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLKQD 423

Query: 421 PS 422
             
Sbjct: 424 LH 425


>gi|33862007|ref|NP_893568.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|81712582|sp|Q7V037|ATPA_PROMP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33640375|emb|CAE19910.1| H+-transporting ATP synthase alpha-subunit [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 505

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY +++ V   G +  I      +  L Q V  G+ +  +       G  + 
Sbjct: 11  SILKQQITDYDQSVNVSNVGTVLQIGDGIARIYGLDQ-VMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    +  G  V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 67  LEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMKGRVVNPLGQPIDGKGEIPTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 NRL-IEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E        + +VVV A + E+  L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKSASVANVVEVLREKGALEYTVVVSAGASEAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDDMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q+  
Sbjct: 423 QAQF 426


>gi|163737807|ref|ZP_02145224.1| ATP synthase F1, alpha subunit [Phaeobacter gallaeciensis BS107]
 gi|161389333|gb|EDQ13685.1| ATP synthase subunit alpha [Phaeobacter gallaeciensis BS107]
          Length = 512

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 180/442 (40%), Gaps = 29/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V I   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLEADNVGIVIFGSDRDIKEGDTVKRTNSIVDVPAGPELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAKERKVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           + +      +                  +   +G++   V + ++          S+VV 
Sbjct: 176 TAVALDAILNQKVYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEETGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   ++ +AP  A  +AEYF   G + L++ D +++ A + R+++      P    
Sbjct: 236 ATASEPAPMQFLAPYAATAMAEYFRDSGKHALIVYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     +E   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEEFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +++   + + +KQ  
Sbjct: 413 DAATQQLLNRGARLTELMKQPQ 434


>gi|126696979|ref|YP_001091865.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9301]
 gi|158513422|sp|A3PET9|ATPA_PROM0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91070175|gb|ABE11096.1| ATP synthase subunit A [uncultured Prochlorococcus marinus clone
           HF10-11D6]
 gi|126544022|gb|ABO18264.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9301]
          Length = 505

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY +++ V   G +  I      +  L Q V  G+ +  +       G  + 
Sbjct: 11  SILKQQITDYDQSVSVSNVGTVLQIGDGIARIYGLDQ-VMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    +  G  V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 67  LEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMQGRVVNPLGQPIDGKGEIPTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V +  +TGI  ID   P+  GQR  +      GKS +      
Sbjct: 127 TRL-IEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKSAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E          +VVV A + E   L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKSASVANIVEVLRERGALDYTVVVSAGASEPAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|90110817|sp|Q6L3A1|ATPA_SACHY RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
          Length = 507

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 185/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  + 
Sbjct: 11  KILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKF 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS S+    +
Sbjct: 423 QSQSNPLPVE 432


>gi|39934703|ref|NP_946979.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009]
 gi|192290219|ref|YP_001990824.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris TIE-1]
 gi|39648553|emb|CAE27074.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009]
 gi|192283968|gb|ACF00349.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris
           TIE-1]
          Length = 441

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 168/436 (38%), Positives = 255/436 (58%), Gaps = 7/436 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR 64
           + LA+   D     V   G +  +  +   +      + +G  +V + G N +   +VI 
Sbjct: 2   KALAEQIGDIDS--VNTYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGANREIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              +   + P    E +  G   +      ++ PS  W GRV+NALG+PIDG   L +G 
Sbjct: 60  FTGNNAIVMPFAGLEGVRRGCRAIIANSAAQVRPSPHWLGRVVNALGEPIDGKGPLVQGP 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M+  ++ PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMQFRNQPPPAHSRKRVGMPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +      +I L+GERGREV+EF++D    + L +SVVVVATSDE  ++R+ A    + IA
Sbjct: 180 NVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAIA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF     +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP   
Sbjct: 240 EYFRDNDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLG 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ RS+AE GRYP ++ L SVSR   
Sbjct: 300 -EGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRSIAERGRYPAINVLKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K+       ++     ++  + +  ++  +G YRPG    +D+AV     + DFL+Q   
Sbjct: 359 KSADPVYLPMIKRARQIMATYADMEELIRLGAYRPGSSAEVDEAVRLHEPLEDFLRQGKD 418

Query: 423 DLSS-EDVFQEITKKL 437
           + +S +  + ++ + L
Sbjct: 419 EATSLQSGYVQLEQIL 434


>gi|197132390|gb|ACH47713.1| ATP synthase CF1 alpha subunit [Geranium carolinianum]
          Length = 504

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 185/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y++ + +V  G +  +      +  L++ V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIKQYNREVKIVNMGTVLRVGDGIARIYGLNE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLMIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +        ++VV  T+     L+ +AP T   +A
Sbjct: 188 QGKDVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 NLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---AFAQFASDLDQNTQNQLERGRRLRELLKQS 424

Query: 421 PSDL 424
            S+ 
Sbjct: 425 QSEP 428


>gi|194884562|ref|XP_001976293.1| GG22793 [Drosophila erecta]
 gi|190659480|gb|EDV56693.1| GG22793 [Drosophila erecta]
          Length = 552

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          SV+V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 244 IYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 474


>gi|148224211|ref|NP_001080447.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1 [Xenopus laevis]
 gi|32766606|gb|AAH54959.1| Atp5a1 protein [Xenopus laevis]
          Length = 553

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 179/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   L    +   +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPL-TSKIRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D    +  GQR  +      GK      T+++    ++  D       
Sbjct: 185 VREPMQTGIKAVDSLVSIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNEGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|30524894|gb|AAP34339.1|AF499777_7 HrcN [Xanthomonas axonopodis pv. glycines]
          Length = 442

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 167/430 (38%), Positives = 244/430 (56%), Gaps = 12/430 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +  L  + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLALGRRYGKVVELVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +       GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGES--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL Q    LS  
Sbjct: 369 DHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLS-- 426

Query: 428 DVFQEITKKL 437
             ++   ++L
Sbjct: 427 -AYESTLEQL 435


>gi|78779928|ref|YP_398040.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9312]
 gi|115312261|sp|Q318U1|ATPA_PROM9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78713427|gb|ABB50604.1| ATP synthase F1 subcomplex alpha subunit [Prochlorococcus marinus
           str. MIT 9312]
          Length = 505

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY +++ V   G +  I      +  L Q V  G+ +  +       G  + 
Sbjct: 11  SILKQQITDYDQSVSVSNVGTVLQIGDGIARIYGLDQ-VMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    +  G  V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 67  LEDDNVGAVLMGEALGVQEGSNVKSTGKIASVPVGEAMQGRVVNPLGQPIDGKGEIPTSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V +  +TGI  ID   P+  GQR  +      GKS +      
Sbjct: 127 TRL-IEEMAPGIIKRRSVHEPMQTGITSIDAMIPVGRGQRELIIGDRQTGKSAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   +E          ++VV A + E+  L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKSASVANVVEVLREKGALDYTIVVSAGASEAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDDMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q+  
Sbjct: 423 QAQF 426


>gi|14009437|dbj|BAB47389.1| mitochondrial ATP synthase alpha-subunit [Cyprinus carpio]
          Length = 552

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  +++  + V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLKLEPENVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   LG       +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPLG-SKQRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V +  +TGI+ +D   P+  GQR  +      GK+ +      +                
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDGTEEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++  YF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGGYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDNFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 425 GMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 475


>gi|325105220|ref|YP_004274874.1| ATP synthase F1, alpha subunit [Pedobacter saltans DSM 12145]
 gi|324974068|gb|ADY53052.1| ATP synthase F1, alpha subunit [Pedobacter saltans DSM 12145]
          Length = 524

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 175/448 (39%), Gaps = 36/448 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL+   S+  + + G +  +      V  L++ V  G+ V  +       G V+ +  D 
Sbjct: 16  QLSGFKSETELEEVGTVLQVGDGIARVYGLTK-VQAGELVEFETG---LQGIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  +EI  GD +    R   I       GRV+N LG+PIDG   +      M +
Sbjct: 72  VGVVLLGPSDEIKEGDTIKRTNRIASIKVGEGMLGRVVNTLGQPIDGKGPIAGETYEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  + RQ V +  +TGI+ ID   P+  GQR  V      GKS +      +    
Sbjct: 132 ERKAPGVIYRQPVTEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKSAVCIDTIINQKEF 191

Query: 189 K-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I   VG++   V   ++    +     +VVV AT+ +   ++  AP     
Sbjct: 192 YDAGQPVFCIYVAVGQKASTVANVVKTLEENGAMAYTVVVSATAADPAPMQFYAPFAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLKRPPGREAYPGDVFYLHSRLLERAAKV 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 NSNDSIAQQMNDLPESIKHLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +D
Sbjct: 372 NLFNAGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELE---AFSKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +     + LKQ      S +
Sbjct: 429 ASTKLVLDKGARNVEILKQGQFSPVSVE 456


>gi|253681068|ref|ZP_04861871.1| ATP synthase F1, alpha subunit [Clostridium botulinum D str. 1873]
 gi|253562917|gb|EES92363.1| ATP synthase F1, alpha subunit [Clostridium botulinum D str. 1873]
          Length = 502

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 183/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   +  V  G I  I      V  + +    G+ +       D  G  + 
Sbjct: 10  SIIRKQIESYEHKIQTVDSGTIIQIGDGIARVYGI-EDCMEGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  GD+V   GR   +       GRV+NALG+P+DG   + K  
Sbjct: 66  LEQDNVGCVLLGAEKGIKEGDVVKRTGRVVEVPVGEALIGRVVNALGQPLDGKGPI-KCT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  + P  ++RQ V++  +TGI+ ID   P+  GQR  +     IGK+ +      
Sbjct: 125 QTRAIELEAPGVIDRQSVKEPLQTGIKAIDSMVPIGKGQRELIIGDRQIGKTAIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V   +           ++VV +T+ +S  L+ ++P +  +
Sbjct: 185 NQKGKNVKCIYVAIGQKQSTVAHIVNTLTEMGAMDYTIVVSSTASDSAPLQFLSPYSGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG++VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMHKGEDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G+ITA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SEKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESELFYAGQKPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D      + +   + + L 
Sbjct: 365 RVGGNAQIKAMKQVSGTLRLELAQYRE---LAAFAQFGSDLDNSSKARLEKGKRLVEILN 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QDQYEP 427


>gi|50058625|gb|AAT69065.1| F1-ATPase alpha subunit [Cuscuta japonica]
          Length = 426

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 173/410 (42%), Gaps = 20/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L        +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGXGALSXH-XRRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--------SMFARSDCFDKVIISL 194
           +  +TG++ +D   P+  GQR  +      GK+ +          + +R       +   
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRESETLYCVYVA 178

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L
Sbjct: 179 IGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHAL 238

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVI 311
           +I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+ 
Sbjct: 239 IIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALP 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K+
Sbjct: 299 VIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQ 358

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 VCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 405


>gi|312142785|ref|YP_003994231.1| ATP synthase F1, alpha subunit [Halanaerobium sp. 'sapolanicus']
 gi|311903436|gb|ADQ13877.1| ATP synthase F1, alpha subunit [Halanaerobium sp. 'sapolanicus']
          Length = 528

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 187/441 (42%), Gaps = 21/441 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ + +   +N       V  G I  +      V  L +    G+ +      
Sbjct: 1   MKLRPEEISSIIKKEIENYGQKIESVGVGTILDVGDGIAHVYGL-KDAMAGELLEFPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D + +  +G   ++  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VFGMALNLEEDNIGVVLLGDETKVQEGDDVKRTGRVVEVPVGDALLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    + S+ P  ++RQ VE   +TG++ ID  TP+  GQR  +      GK
Sbjct: 117 GKGAI-ESDTYRPVESEAPGVVDRQPVEVPLQTGLKSIDSMTPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V +  +    +     ++VV AT+ E   +R
Sbjct: 176 TAIGIDTIINQKDNDVICIYVAIGQKNSTVAQLTKRLEEEGAMDYTIVVSATASEPAPIR 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
            +AP     + E+F  + D  + ++ D +++ A + R ++      P    YP  VF   
Sbjct: 236 YIAPYAGCAMGEHFMYEDDRDVLVVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  V     + +  I  +V SI DG I L   L   G  
Sbjct: 296 SRLLERAAKLNDERGGGSLTALPIVETQAGDVSAYIPTNVISITDGQIYLESELFFSGVR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A     K++  +L   + ++ E         +   +D    + + 
Sbjct: 356 PAVNVGISVSRVGGNAQIKAMKEVAGTLRLDLSQYRELE---AFSQFGSDLDKATQQKLA 412

Query: 409 QVPIIYDFLKQSP-SDLSSED 428
           +   I + LKQ   S +  ED
Sbjct: 413 RGERIVEILKQDQYSPMDVED 433


>gi|168187563|ref|ZP_02622198.1| flagellar protein export ATPase FliI [Clostridium botulinum C str.
           Eklund]
 gi|169294576|gb|EDS76709.1| flagellar protein export ATPase FliI [Clostridium botulinum C str.
           Eklund]
          Length = 438

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 168/440 (38%), Positives = 245/440 (55%), Gaps = 13/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           +  N E +         +     G +  +  +   V  +  +V  G+      K N   +
Sbjct: 3   ISINFEGIKNKISR--CDFTYTEGLVKQVIGLTIEVEGIKAFV--GEVCTIYNKENEPIM 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D V + P+G    I  G  V    +   +  S    G+V+N LGKP++ ++ 
Sbjct: 59  CEVVGFKEDNVILMPLGELIGIGPGCRVVPSKKYLSVKCSEKLLGKVLNGLGKPLNVEEK 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G +   + +  P  + R+R++    TG+R ID F     GQRIG+FAGSG+GKST L
Sbjct: 119 LPLG-IDYPLDTAPPDPLRRRRIKDEIATGVRAIDGFLTCGEGQRIGIFAGSGVGKSTTL 177

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREV +FI +D   + LKKSV+V ATSD+  ++R     T
Sbjct: 178 GMIAREAKADINVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFT 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LPRL+ER 
Sbjct: 238 ATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERS 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D L SV
Sbjct: 298 GMSDK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDILNSV 355

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL  +    + KK  S    L+  ++ + D+  IG Y  G +  +D A+     + ++L
Sbjct: 356 SRLMSEIAKDEHKKAASKARDLLATYKNSEDLINIGAYVKGSNPKVDMAIQYNDKLNEYL 415

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q   + S    FQE   +L
Sbjct: 416 RQGIKEHSE---FQESVTRL 432


>gi|83952823|ref|ZP_00961553.1| ATP synthase subunit A [Roseovarius nubinhibens ISM]
 gi|83835958|gb|EAP75257.1| ATP synthase subunit A [Roseovarius nubinhibens ISM]
          Length = 512

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 188/442 (42%), Gaps = 29/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGKDAEVAEVGRVLSVGDGIARVHGL-DNVQAGELVEFPGA- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD+V         P      GRV++ALG P+D
Sbjct: 59  --VMGMALNLETDNVGVVIFGSDRQIKEGDVVKRTKSIVDVPIGDELLGRVVDALGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G     +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIGAAKRGLA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
                 T+L+  + ++            +   VG++   V + ++    +     S+VV 
Sbjct: 176 TAIALDTMLNQKSYNEAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEENGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP +A  +AE+F   G + L++ D +++ A S R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYSATAMAEHFRDNGRHALIVYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G  ++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDNGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +++   + + +KQ  
Sbjct: 413 DAATQQLLNRGARLTELMKQPQ 434


>gi|294789021|ref|ZP_06754261.1| ATP synthase F1, alpha subunit [Simonsiella muelleri ATCC 29453]
 gi|294483123|gb|EFG30810.1| ATP synthase F1, alpha subunit [Simonsiella muelleri ATCC 29453]
          Length = 515

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 191/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPAEISDLLKAKIENLNTKQEVRTRGTVISVTDGIVRVHGLSD-VMQGEMLEFSG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDEVKCTGRILEVPVGRELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TNKTAPIEKIAPGVIARQSVDQPMQTGIKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +           ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKNTGVICIYVAIGQKASSIANVVRKLEEHGAMGHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F   G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYSGCTMGEFFRDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINAVEVEKLTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +    ++ + +KQ   +  S
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQFNTLS 440


>gi|296331320|ref|ZP_06873792.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676306|ref|YP_003867978.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151435|gb|EFG92312.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414550|gb|ADM39669.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 502

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 111/437 (25%), Positives = 181/437 (41%), Gaps = 15/437 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  ++Y  ++ VQ  G +  +      V  L      G+ V         LG    + 
Sbjct: 12  IKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGL-DNCMAGELVEFSNG---VLGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G   EI  GD V   GR   +       GR++N LG+P+DG   +     +
Sbjct: 68  ESNVGIVILGPFSEIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + S+  +
Sbjct: 127 RPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDSILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     +   +G++   VR  +E          ++VV A++ +   L  +AP   VT+A
Sbjct: 187 KDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER      
Sbjct: 247 EEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            KG  +ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVSGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLKQD 423

Query: 421 PSDLSSEDVFQEITKKL 437
            +     +    I   L
Sbjct: 424 LNKPLPVEKQVAILYAL 440


>gi|42795485|gb|AAS46052.1| ATP synthase CF1 alpha chain [Oryza sativa Indica Group]
 gi|42795552|gb|AAS46118.1| ATP synthase CF1 alpha chain [Oryza sativa Japonica Group]
 gi|42795616|gb|AAS46181.1| ATP synthase CF1 alpha chain [Oryza sativa Japonica Group]
 gi|290790571|gb|ADD62831.1| ATP synthase CF1 alpha subunit [Oryza sativa Japonica Group]
 gi|290790640|gb|ADD62899.1| ATP synthase CF1 alpha subunit [Oryza meridionalis]
          Length = 533

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 36  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 91

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 92  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 151

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 152 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 210

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 211 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 270

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 271 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 330

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 331 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 390

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 391 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 447

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 448 KQSQANPLPVEEQIATI 464


>gi|90994433|ref|YP_536923.1| ATP synthase CF1 alpha subunit [Porphyra yezoensis]
 gi|110832066|sp|Q1XDP5|ATPA_PORYE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|90818997|dbj|BAE92366.1| ATP synthase CF1 alpha chain [Porphyra yezoensis]
          Length = 504

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      V  L + V  G+ +  + K    +G  + 
Sbjct: 11  SIIRQQIEKYDQDVEVANIGTVLQVGDGIARVYGLDE-VMAGELLEFEDK---TIGVALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G +I  G  V   GR  +I     + GRV++ L +PID        +
Sbjct: 67  LESDNVGVVLMGDGRDILEGSSVKGTGRIAQIPVGDAFLGRVVDPLARPIDDKGE-PASN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S  P  + RQ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 126 GTRLIESMAPGIIGRQSVCEPMQTGITAIDSMIPIGRGQRELIIGDRQTGKTAVALDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           +++V A +D    L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAIGQKASSVAQVVSSLQDKGALDYTIIVAANADSPATLQYIAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NAELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREILK 422

Query: 419 QSPS 422
           Q+ +
Sbjct: 423 QAQN 426


>gi|6561624|gb|AAF16968.1|AF197636_1 ATPase alpha subunit [Buxus sempervirens]
          Length = 424

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGASESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|16080736|ref|NP_391564.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311643|ref|ZP_03593490.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315971|ref|ZP_03597776.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320882|ref|ZP_03602176.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325167|ref|ZP_03606461.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|584804|sp|P37808|ATPA_BACSU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha; AltName: Full=Vegetative protein 100;
           Short=VEG100
 gi|580831|emb|CAA82258.1| ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2636208|emb|CAB15700.1| ATP synthase (subunit alpha, component F1) [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 502

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/437 (25%), Positives = 181/437 (41%), Gaps = 15/437 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  ++Y  ++ VQ  G +  +      V  L      G+ V         LG    + 
Sbjct: 12  IKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGL-DNCMAGELVEFSNG---VLGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G   EI  GD V   GR   +       GR++N LG+P+DG   +     +
Sbjct: 68  ESNVGIVILGPFSEIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++  +
Sbjct: 127 RPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDAILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     +   +G++   VR  +E          ++VV A++ +   L  +AP   VT+A
Sbjct: 187 KDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER      
Sbjct: 247 EEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            KG  +ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVSGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLKQD 423

Query: 421 PSDLSSEDVFQEITKKL 437
            +     +    I   L
Sbjct: 424 LNKPLPVEKQVAILYAL 440


>gi|126739850|ref|ZP_01755541.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. SK209-2-6]
 gi|126719082|gb|EBA15793.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. SK209-2-6]
          Length = 512

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 182/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G  + +  D V I   G   +I  GD V        +       GRV++ LG PID
Sbjct: 59  --IMGMALNLEADNVGIVIFGSDRDIKEGDTVKRTNSIVDVPVGPELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAAKRGVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
                  +L+  + +D            +   VG++   V + ++    +     S+VV 
Sbjct: 176 TAVALDAMLNQKSYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEENGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   L+ +AP  A  +AE+F   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPLQFLAPYAATAMAEHFRDNGQHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + + +   + + +KQ      +
Sbjct: 413 DAATQQLLARGARLTELMKQPQYSPLT 439


>gi|20799692|gb|AAM28609.1|AF503356_1 ATPase alpha subunit [Hydnora africana]
          Length = 404

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 97/410 (23%), Positives = 172/410 (41%), Gaps = 20/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  D V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVGIVIFGSDTAIKE 57

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G    +       GRV++ALG P+DG  +L        +  K P  + RQ V 
Sbjct: 58  GDLVKRTGSIVDVPVGKAMLGRVVDALGVPLDGRGALSSDHGRRRVEVKAPGIIERQSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIIS 193
           +  +TG++ +D   P+  GQR  +      GK+ +      +               +  
Sbjct: 118 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYV 177

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + +++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 178 AIGQKRSTVAQLVQIISEANALEYTILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 237

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 238 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 298 PVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMK 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  SL   + ++ E   +     +   +D      +H+   + + LKQ 
Sbjct: 358 QVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLHRGARLTEVLKQP 404


>gi|89257060|ref|YP_514422.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315416|ref|YP_764139.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503270|ref|YP_001429335.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009447|ref|ZP_02274378.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368299|ref|ZP_04984318.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
           257]
 gi|290953657|ref|ZP_06558278.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312974|ref|ZP_06803683.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           holarctica URFT1]
 gi|119367954|sp|Q2A1I0|ATPA_FRATH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122324598|sp|Q0BK82|ATPA_FRATO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201665|sp|A7NEH6|ATPA_FRATF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|89144891|emb|CAJ80236.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130315|gb|ABI83502.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254108|gb|EBA53202.1| ATP synthase alpha chain [Francisella tularensis subsp. holarctica
           257]
 gi|156253873|gb|ABU62379.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 513

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLND-VTAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEYGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|311070202|ref|YP_003975125.1| F0F1 ATP synthase subunit alpha [Bacillus atrophaeus 1942]
 gi|310870719|gb|ADP34194.1| F0F1 ATP synthase subunit alpha [Bacillus atrophaeus 1942]
          Length = 502

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 109/437 (24%), Positives = 179/437 (40%), Gaps = 15/437 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  ++Y   + V   G +  I      V  L      G+ V         LG    + 
Sbjct: 12  IKQQIQNYQSEIEVHDVGTVIQIGDGIARVHGL-DNCMAGELVEFSNG---VLGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G   EI  GD V   GR   +       GR++N LG+P+DG   +     +
Sbjct: 68  ESNVGIVILGPYTEIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++  +
Sbjct: 127 RPIESQAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDTILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     +   +G++   VR  +E          ++VV A++ +   L  +AP   VT+ 
Sbjct: 187 KDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER      
Sbjct: 247 EEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            KG  +ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLKQD 423

Query: 421 PSDLSSEDVFQEITKKL 437
            +     +    I   L
Sbjct: 424 LNKPLPVEKQVAILYAL 440


>gi|254553611|gb|ACT67264.1| ATP synthase CF1 alpha subunit [Joinvillea plicata]
          Length = 507

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 184/426 (43%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E Y++ + ++  G +  +      +  L + V  G+ V          G  + 
Sbjct: 11  KILRERIEQYNRKITIENVGRVVQVGDGIARIIGLGE-VMSGELVEFAEG---TRGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G+R   V + +  +        ++VV   +D    L+ +AP T   
Sbjct: 186 NQKGQNVICVYVAIGQRASSVAQVVTTFQEGGAMEYTIVVAEMADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKS 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++       + +F E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELLK 422

Query: 419 QSPSDL 424
           QS S+ 
Sbjct: 423 QSQSNP 428


>gi|157777943|gb|ABV70129.1| ATP synthase CF1 alpha chain [Heterosigma akashiwo]
          Length = 503

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 104/436 (23%), Positives = 187/436 (42%), Gaps = 17/436 (3%)

Query: 4   NLETLAQLAED-----YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N + ++ + ++       +  +   G +  +      V  L + V  G+ +  +      
Sbjct: 5   NPDEISNIIKESILKYTGEQTIENVGTVLQVGDGIARVYGLDE-VMSGELIQFE-DEERT 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G G  I  G  V   G+  +I       GR+++ L  PIDG  
Sbjct: 63  VGIALNLENDNVGAVLMGEGIGILEGSSVTATGKIAQIPVGEGCLGRILDPLANPIDGKG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           ++   +  + I S  P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++
Sbjct: 123 AIAGTETRL-IESMAPGIISRQSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTSI 181

Query: 178 LSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
                 +        +   +G++   V + +      D LK +V+V A ++++  L+ +A
Sbjct: 182 ALDTIINQKTEDVVCVYVAIGQKASSVAQAVTVLEEKDALKYTVIVAANANDAATLQYIA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLL
Sbjct: 242 PYTGAAIAEYFMYKGKATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +    G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++
Sbjct: 302 ERAAKLNESMGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAIN 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  +L   + +F+E         +   +D    K + +   
Sbjct: 362 VGISVSRVGSAAQIKAMKQVAGTLKLELAQFDELE---AFSQFSSDLDKNTQKQLARGKR 418

Query: 413 IYDFLKQSPSDLSSED 428
           + + LKQ      S +
Sbjct: 419 LRELLKQPQGSPYSVE 434


>gi|113869575|ref|YP_728064.1| F0F1 ATP synthase subunit alpha [Ralstonia eutropha H16]
 gi|123032572|sp|Q0K5M5|ATPA_RALEH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|113528351|emb|CAJ94696.1| Membrane-bound ATP synthase, F1 sector,alpha-subunit [Ralstonia
           eutropha H16]
          Length = 513

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 107/446 (23%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +     L     V   G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRISGLGAEAEVRNTGTVISVTDGICRVHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKETDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   VG++   +   +           +VVV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGVFCVYVAVGQKASTIANVVRKLEEHGAMEYTVVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKFTNGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKNLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDDATRKQLERGRRVTELLKQPQYQP 438


>gi|295065725|ref|YP_003587665.1| ATP synthase CF1 alpha subunit [Anomochloa marantoidea]
 gi|251765249|gb|ACT15403.1| ATP synthase CF1 alpha subunit [Anomochloa marantoidea]
          Length = 508

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 107/431 (24%), Positives = 187/431 (43%), Gaps = 15/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +G  
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGKGEIGAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I +  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IEAPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCFDKVI--ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAV 239
            +     VI     +G+R   V + +  +  +   +  +VVA   +S    + +AP T  
Sbjct: 185 LNQKGQNVICVYVAIGQRASSVAQVVTTFQEEGAMEYTIVVAEMADSLATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++   L   + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKLKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSPSDLSSED 428
           KQS S+    +
Sbjct: 422 KQSQSNPLPVE 432


>gi|11467365|ref|NP_043222.1| ATP synthase CF1 alpha subunit [Cyanophora paradoxa]
 gi|1352025|sp|P48080|ATPA_CYAPA RecName: Full=ATP synthase subunit alpha, cyanelle; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|1016166|gb|AAA81253.1| alpha subunit of F1 portion of ATP synthase [Cyanophora paradoxa]
          Length = 505

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V   G +  +      V  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRQQIEQYDQEIQVSNVGTVLQVGDGIARVYGLDK-VMSGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V    +  ++       GRV++AL +PIDG   +   D
Sbjct: 67  LEADNVGVVLMGDGRNILEGSSVRATQKIAQVPVGDAVIGRVVDALARPIDGKGDIATTD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESSAPGIISRKFVYEPLQTGITAIDAMIPIPRGQRELIIGDRQTGKTAVAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +           +V+V A +D+   L+ +AP T  +
Sbjct: 186 NQKGQGVVCVYVAIGQKASSVAQVVGVLQEKGALDYTVIVAANADDPATLQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGQHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     +    I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SPQLGEGSMTALPIVETQAGDVCAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F+E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFDELK---AFSQFSSDLDKATQLQLARGERLRELLK 422

Query: 419 QSP 421
           Q  
Sbjct: 423 QQQ 425


>gi|300693817|ref|YP_003749790.1| type III secretion system atpase [Ralstonia solanacearum PSI07]
 gi|299075854|emb|CBJ35163.1| type III secretion system ATPase [Ralstonia solanacearum PSI07]
          Length = 439

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 160/434 (36%), Positives = 237/434 (54%), Gaps = 11/434 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQV 62
           LE+L   A   +  L+ + G +  +T     V  +   V LG+       +   +  G+V
Sbjct: 7   LESLENAA--RTTPLIRRFGKVVEVTGTLLRVGGVD--VRLGELCTLTEPDGTVMQEGEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  +     + P G    +S    V   GR   +       GRV++ LG+P DG   L  
Sbjct: 63  VGFSEHFALVAPFGGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPPLEV 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            D  + + +  P  M R+ VE+   TG+RVID    L  GQR+G+FA +G+GKSTL+ MF
Sbjct: 123 VDY-VPVFANAPDPMTRRLVEQPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMF 181

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I L+GERGREVREFI +    + +++SVVV ATSD S + R  A      
Sbjct: 182 ARGTDCDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAYVGTA 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G S
Sbjct: 242 VAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMS 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L S+SR+
Sbjct: 302 A--AGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRV 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +       +  L+ ++ E   +  +G Y+ G D + D AV     +  FL+Q 
Sbjct: 360 MTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMESFLRQR 419

Query: 421 PSDLSSEDVFQEIT 434
             +  S D  + + 
Sbjct: 420 TDEWCSPDETRRLL 433


>gi|291486266|dbj|BAI87341.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. natto
           BEST195]
          Length = 502

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/437 (25%), Positives = 181/437 (41%), Gaps = 15/437 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  ++Y  ++ VQ  G +  +      V  L      G+ V         LG    + 
Sbjct: 12  IKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGL-DNCMAGELVEFSNG---VLGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G   EI  GD V   GR   +       GR++N LG+P+DG   +     +
Sbjct: 68  ESNVGIVILGPFSEIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++  +
Sbjct: 127 RPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDAILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     +   +G++   VR  +E          ++VV A++ +   L  +AP   VT+A
Sbjct: 187 KDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER      
Sbjct: 247 EEFMYSGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            KG  +ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVSGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLKQD 423

Query: 421 PSDLSSEDVFQEITKKL 437
            +     +    I   L
Sbjct: 424 LNKPLPVEKQVAILYAL 440


>gi|312111676|ref|YP_003989992.1| ATPase, FliI/YscN family [Geobacillus sp. Y4.1MC1]
 gi|311216777|gb|ADP75381.1| ATPase, FliI/YscN family [Geobacillus sp. Y4.1MC1]
          Length = 426

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 239/424 (56%), Gaps = 12/424 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL---GQVIRINLDIVYICPVGI 77
           + G +S +  +   +        +GD   +H G          +V+      V + P   
Sbjct: 6   RFGKVSRVIGLM--IEAKGPESSVGDICYIHTGSGKQKQMIAAEVVGFKEQHVLLMPFST 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + IS G +V   G+  +I       G+V+++LG P+DG   L KG   + I    P  +
Sbjct: 64  VQHISPGCIVEATGKPLQIRVGFPLIGKVLDSLGYPLDGS-PLSKGLQPISIERNPPNPL 122

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  + +  + G+RVID    +  GQR+G+FAGSG+GKSTL+ M AR    D  +I+L+G
Sbjct: 123 ARPPISEPIEVGVRVIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNADINVIALIG 182

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFI  D   + L +S+VVVATSD+  ++R     TA  IAEYF  +G +V+ +
Sbjct: 183 ERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRDQGMDVMFM 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +    G ITA  +VLV
Sbjct: 243 MDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTGTNA--CGTITAFYTVLV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGH VL RSLA +G+YP ++ L SVSR+ +   S + ++    
Sbjct: 301 DGDDMNEPIADTVRGILDGHFVLERSLANKGQYPAINVLKSVSRVMNHIISPEHRQAADK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEIT 434
           L  L+  +  + D+  IG Y+ G    +D+A+   P I  F KQ   + +++D   + + 
Sbjct: 361 LRQLLSTYINSEDLINIGAYKRGSSKEIDEAIRYYPEIISFCKQDIDEKATKDESIETLL 420

Query: 435 KKLQ 438
           + +Q
Sbjct: 421 RLMQ 424


>gi|166714020|ref|ZP_02245227.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 442

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 165/430 (38%), Positives = 241/430 (56%), Gaps = 12/430 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +       GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E    TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGES--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
              +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL Q    LS  
Sbjct: 369 YHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDQLSD- 427

Query: 428 DVFQEITKKL 437
             ++   ++L
Sbjct: 428 --YESTLEQL 435


>gi|91200226|emb|CAJ73270.1| strongly similar to flagellar ATPase fliI [Candidatus Kuenenia
           stuttgartiensis]
          Length = 439

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 158/426 (37%), Positives = 243/426 (57%), Gaps = 12/426 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYIC 73
              LV + G ++ I  +   +      V +G+       N +     +V+      + + 
Sbjct: 17  ESVLVQRTGRVAHIAGLV--IESNGPSVPVGELCYIHSNNGETPIPAEVVGFKEKRILLM 74

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G  E I  G+ V   G    +       GR++  LG+P+DG   L   +  + I +  
Sbjct: 75  PIGELERIGPGNRVTASGSPLTVGVGMGLMGRILGGLGEPMDGKGPLN-VEERVSIYNSP 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R R+++  +TG+R ID       GQR+G+FAGSG+GKSTL+ M AR+   +  +I
Sbjct: 134 PDPLTRSRIKEVLETGVRAIDGMLTFGQGQRLGIFAGSGVGKSTLMGMIARNSGAEVNVI 193

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+ ++   + +KKSV+V  TSD+  +LR      A +IAEYF  +G  
Sbjct: 194 ALIGERGREVREFVEKNLGEEGMKKSVIVSVTSDKPALLRVKGAYIASSIAEYFRDRGMR 253

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA++ REI    GE P ++GY  SVF+ LP+LLER G     KG+IT + 
Sbjct: 254 VLLMMDSVTRFANAQREIGLAIGEPPTSKGYTPSVFALLPKLLERSG--TGTKGSITGLY 311

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ N+PIAD+VR ILDGH+VL+R++A +  YP +D + SVSR  D   + + +K
Sbjct: 312 TVLVDGDDMNEPIADAVRGILDGHVVLSRAMASQNHYPAIDIMESVSRCMDDIITGEHRK 371

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               L  +   ++E  D+  IG Y  G +  +D A+  +  I ++LKQ   D+++   F 
Sbjct: 372 AAQMLKAVYATYKEAEDMINIGAYAKGGNKKIDYALSVIDAINEYLKQ---DMTTNGNFN 428

Query: 432 EITKKL 437
           E   KL
Sbjct: 429 ESISKL 434


>gi|321313233|ref|YP_004205520.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis BSn5]
 gi|320019507|gb|ADV94493.1| F0F1 ATP synthase subunit alpha [Bacillus subtilis BSn5]
          Length = 502

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/437 (25%), Positives = 181/437 (41%), Gaps = 15/437 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  ++Y  ++ VQ  G +  +      V  L      G+ V         LG    + 
Sbjct: 12  IKQQIQNYQSDIEVQDVGTVIQVGDGIARVHGL-DNCMAGELVEFSNG---VLGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G   EI  GD V   GR   +       GR++N LG+P+DG   +     +
Sbjct: 68  ESNVGIVILGPFSEIREGDEVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++  +
Sbjct: 127 RPIESPAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDAILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     +   +G++   VR  +E          ++VV A++ +   L  +AP   VT+A
Sbjct: 187 KDQDMICVYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVTMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER      
Sbjct: 247 EEFMYSGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSD 306

Query: 303 EKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            KG  +ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVSGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLKQD 423

Query: 421 PSDLSSEDVFQEITKKL 437
            +     +    I   L
Sbjct: 424 LNKPLPVEKQVAILYAL 440


>gi|89098641|ref|ZP_01171523.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911]
 gi|89086603|gb|EAR65722.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911]
          Length = 438

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 167/434 (38%), Positives = 245/434 (56%), Gaps = 11/434 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ---GKNSDNLGQVIRINL 67
           ++E    +   + G +  +  +   +        +GD  +     GK    + +V+    
Sbjct: 7   ISEIGQIDTYKRYGKVKKVVGLM--IESQGPESSIGDVCIIHVGSGKKRKIMAEVVGFKE 64

Query: 68  DIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V + P     EI+ G LV        I       G VI+ALG P+DG  +L KG  S+
Sbjct: 65  ENVILMPYTAISEIAPGSLVEATLKPLEIKIGTSLIGEVIDALGHPLDGK-ALPKGLASV 123

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                 P  MNR  +    + G+R ID    + +GQR+G+FAGSG+GKSTLL M AR+  
Sbjct: 124 PTEQDPPNPMNRPPISAPVEVGVRAIDSLLTVGYGQRVGIFAGSGVGKSTLLGMVARNTK 183

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I+L+GERGREVREFI  D   + LK+S+V+ ATSD+  ++R     TA  IAEYF
Sbjct: 184 ADLNVIALIGERGREVREFIENDLGEEGLKRSIVIAATSDQPALMRIKGAYTATAIAEYF 243

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG NV+L++DS+TR A + RE+    GE P  +GY  SVF+ LP+LLER G +   KG
Sbjct: 244 RDKGLNVVLMMDSVTRVAMAQREVGLAIGEPPTTKGYTPSVFAVLPKLLERTGTN--HKG 301

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VLVDGD+ N+PIAD+VR ILDGH VL+R+LA +G+YP ++ L SVSR+ +   
Sbjct: 302 SITAFYTVLVDGDDMNEPIADTVRGILDGHFVLDRALANKGQYPAINVLKSVSRVMNNIV 361

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-L 424
             + KK    L   +  +  + D+  IG Y+ G    +D+AV   P I  FLKQ   + +
Sbjct: 362 PHEHKKSAELLRERLSTYINSEDLINIGAYKKGTSREIDQAVRLYPEIISFLKQGTEEKV 421

Query: 425 SSEDVFQEITKKLQ 438
           + +D  Q + + ++
Sbjct: 422 TMQDSIQHLLRLME 435


>gi|323341383|ref|ZP_08081627.1| flagellum-specific ATP synthase [Lactobacillus ruminis ATCC 25644]
 gi|323091260|gb|EFZ33888.1| flagellum-specific ATP synthase [Lactobacillus ruminis ATCC 25644]
          Length = 451

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 169/432 (39%), Positives = 241/432 (55%), Gaps = 11/432 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLD 68
           L +          G +S +  +      LS  V +G+      K SD   L +V+    +
Sbjct: 14  LYQAEHHKFYTTYGKVSEVVGLVIKAEGLS--VFVGEICEVAVKGSDKVALAEVVGFVKE 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V + P+   E I  G +V   G+  ++       G  ++ LG+P D  D      +   
Sbjct: 72  TVLLMPLDELEGIGPGCIVKPTGKTLQVRVGPQLLGHTLDGLGRPFDDSDIDNDKLVDYP 131

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           ++   P    R+R+     TG+R ID    +  GQR+G+FAGSG+GKSTLL M AR    
Sbjct: 132 VIQDSPDPFRRKRISNVMPTGVRTIDGLLTVGEGQRMGIFAGSGVGKSTLLGMIARYCQA 191

Query: 188 DKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D ++I L+GERGREV EFI +D   +   KSVVV ATSD  P++R     TA  IAEYF 
Sbjct: 192 DVIVIGLIGERGREVMEFIEKDLGKEGYAKSVVVCATSDTPPLVRLKGAHTATAIAEYFR 251

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  V+L++DS+TRFA + REI  ++GE P  +GY  SVF+ELP+LLER G SEK  G+
Sbjct: 252 DQGKKVVLMMDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFAELPKLLERSGMSEK--GS 309

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VLV+GD+ N+PIAD+VR ILDGHIVL+R +A +  YP +D   S+SRL  +  S
Sbjct: 310 ITAFYTVLVEGDDMNEPIADAVRGILDGHIVLSRKIASQNHYPAIDVQVSLSRLMKELVS 369

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +  K    L   +  + +++D+  IG Y+ G + ++D AV     I DFLKQ   + SS
Sbjct: 370 EEHTKDAGELRENMGVYNDSKDLIDIGAYKKGSNAVIDYAVSLHVPIEDFLKQRVEEYSS 429

Query: 427 EDVFQEITKKLQ 438
              F+E   +L 
Sbjct: 430 ---FEETESRLH 438


>gi|56405329|sp|P29706|ATPA_PROMO RecName: Full=ATP synthase subunit alpha, sodium ion specific;
           AltName: Full=Na(+)-translocating ATPase subunit alpha
          Length = 500

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/432 (25%), Positives = 192/432 (44%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLA----QLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++       E+Y K+L V   G +  +      +  LS     G+ +      
Sbjct: 1   MKIRPEEISGIIKTEIENYKKSLDVKTSGSVVQVGDGIARIYGLS-NAKAGELLEFPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  + V    +G    +  GD V   G+   +       GRV+N+LG+PID
Sbjct: 59  --ITGMALNLEENNVGAVILGDPTGVKEGDEVRATGQIAAVGAGEALLGRVVNSLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L K +  M +  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGEL-KTEKMMPLDRKAYGIISRKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D   K I   +G++   V + ++        + ++VV AT+ ES  L+
Sbjct: 176 TAVALDAIINQKDTGVKCIYVAIGQKRSTVAQIVKRLEDAGALEYTIVVAATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MAP T V++ EYF  KG++VL++ D +++ A + RE++      P    +P  VF    
Sbjct: 236 YMAPYTGVSMGEYFMDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 296 RLLERAAKLSDEIGAGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ + +   + ++ E   +     +   +D      + +
Sbjct: 356 AINAGISVSRVGGAAQIKAMKQVAAQVKLELAQYNE---LLTFAQFGSDLDKATLAQLER 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GHRIMEILKQEQ 424


>gi|327355595|gb|EGE84452.1| ATP synthase subunit alpha [Ajellomyces dermatitidis ATCC 18188]
          Length = 551

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 185/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAED-----YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           + +   L+ + E      + +    + G + S+      V  ++  V   + V      S
Sbjct: 44  KASPTELSSILERKIRGAHEEAGFAETGRVLSVGDGIARVHGMA-NVQAEELVEFA---S 99

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V +   G    +  G+ V   G+   +       GRVI+ALG PIDG
Sbjct: 100 GVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGQIVDVPVGDALLGRVIDALGNPIDG 159

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +   +       K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 160 KGPIKTTE-RRRAQVKAPGILPRRSVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKT 218

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATS 224
                 +L+    +D  D       +   VG++   V + ++    ++  K S+VV AT+
Sbjct: 219 AVALDAMLNQKRWNDSNDETKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATA 278

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA   AE+F   G + L+  D +++ A + R+++      P    YP 
Sbjct: 279 SEAAPLQYIAPFTATACAEFFRDSGRHALITYDDLSKQAVAYRQMSLLLRRPPGREAYPG 338

Query: 285 SVFSELPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER        + G++TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 339 DVFYLHSRLLERAAKLNDAHKGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAEL 398

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 399 FYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 455

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + +++   + + LKQ  
Sbjct: 456 TKQTLNRGERLTELLKQKQ 474


>gi|292669729|ref|ZP_06603155.1| flagellar protein export ATPase FliI [Selenomonas noxia ATCC 43541]
 gi|292648526|gb|EFF66498.1| flagellar protein export ATPase FliI [Selenomonas noxia ATCC 43541]
          Length = 461

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 166/420 (39%), Positives = 238/420 (56%), Gaps = 13/420 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDIVYICPVGIGE 79
            G ++ I  +   +      V +G+        S       +V+      V + PVG  +
Sbjct: 32  TGKVTQIIGLV--IESQGPTVTVGELCYVSSHFSGMPPVPAEVVGFREGSVLLMPVGEMQ 89

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   GR  R+       GRV++ LG PIDG   +   +    + +  PP + R
Sbjct: 90  GIGPGCEVIATGRRLRVKVGEELLGRVLDGLGNPIDGKGPILAQE-EYPLQAPPPPPLTR 148

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            R+      G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+   D  +I+LVGER
Sbjct: 149 PRIHDNLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEADISVITLVGER 208

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVR+FI  D   + LK+SVVVVATSD+  ++R    +T   IAEYF  +G  V+L++D
Sbjct: 209 GREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFRDQGHKVVLMMD 268

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G SE  +G+IT + +VLVDG
Sbjct: 269 SVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTSE--RGSITGIYTVLVDG 326

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L SVSR+  +       +    + 
Sbjct: 327 DDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEVVDKSHLEAAQEMR 386

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  + E  D+  IG Y  G    +D A+ ++  I +FL+Q   +++S   ++E  ++L
Sbjct: 387 QLMAVYAEAEDLIHIGAYVKGSSPKIDAAIQKIDGINEFLRQDIYEVTS---YEETEQQL 443


>gi|55824794|gb|AAV66479.1| F1-ATPase alpha subunit [Cuscuta sandwichiana]
          Length = 428

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|50058611|gb|AAT69058.1| F1-ATPase alpha subunit [Maripa repens]
          Length = 430

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER          G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDHTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +       +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGXVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|85704180|ref|ZP_01035283.1| ATP synthase subunit A [Roseovarius sp. 217]
 gi|85671500|gb|EAQ26358.1| ATP synthase subunit A [Roseovarius sp. 217]
          Length = 512

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 183/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGKDAEVAEIGRVLSVGDGIARVHGL-DNVQAGELVEFPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLESDNVGVVIFGSDRDIKEGDTVKRTKSIVDVPIGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K         K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTKTRGLADVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +      +                  +   +G++   V + ++       +K S+VV 
Sbjct: 176 TAVALDAILNQKIYNEAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEESGAIKYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP +A  +AE+F   G + L++ D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYSATAMAEHFRDNGRHALIVYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDNGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGVRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ+     +
Sbjct: 413 DAATQQLLNRGARLTELMKQAQYSPLT 439


>gi|159904111|ref|YP_001551455.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9211]
 gi|226739924|sp|A9BCD9|ATPA_PROM4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|159889287|gb|ABX09501.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9211]
          Length = 504

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   +Y K++ V   G +  I      +  L + V  G+ V  +       G  + 
Sbjct: 11  SILKQQIANYDKSVSVSNVGTVLQIGDGIARIYGLEK-VMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    +  G  V   G+   +       GRV+N LG+P+DG+  +   D
Sbjct: 67  LEDDNVGAVLMGEALGVQEGSTVKSTGKIASVPVGQAMLGRVVNPLGQPVDGNGDIATSD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESLAPGIIKRKSVHEPMQTGITSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V + +E        + ++VV A++ E+  L+ +AP T   
Sbjct: 186 NQKGQDVVCVYVAVGQKSASVAQVVEVLREKGALEYTIVVNASASEAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  G+  +TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SESMGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQKQLGRGKRLRELLK 422

Query: 419 QSPS 422
           Q+  
Sbjct: 423 QAQF 426


>gi|116008297|gb|ABJ51956.1| mitochondrial H+ ATPase a subunit [Pinctada fucata]
          Length = 553

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 182/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLERDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +   D    +  K P  + R  
Sbjct: 126 KEGDIVKRTGAIVDVPVGKELLGRVVDALGNPIDGKGPITSPD-RQRVGVKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++  +TGI+ +D   P+  GQR  +      GK      T+++    +D  +       
Sbjct: 185 VKEPMQTGIKTVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDGTNEKAKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K +V+V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 245 IYVAIGQKRSTVAQIVKRLTDADAMKYTVIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G++
Sbjct: 305 MHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDDNGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D      +++   + + LKQ+ 
Sbjct: 425 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDQATQNLLNRGVRLTELLKQAQ 475


>gi|229549266|ref|ZP_04437991.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis ATCC 29200]
 gi|229305503|gb|EEN71499.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis ATCC 29200]
          Length = 518

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 109/421 (25%), Positives = 175/421 (41%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y + L V+  G ++ +         L +    G+ V     +    G    
Sbjct: 10  ALIKEQIENYQQQLAVEEVGTVTYVGDGIARAHGL-ENAMSGELVEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LETNDVGIIILGDFETIREGDKVQRTGKIMEVPVGEALIGRVVNPLGQPLDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  M RQ V +  +TG++ ID   P+  GQR  V      GK+T+      
Sbjct: 125 KTRPVEATAPGVMQRQSVAEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTTIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E       L  ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVRNQVETLRKFGALDYTIVVTAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|50058599|gb|AAT69052.1| F1-ATPase alpha subunit [Bonamia media]
          Length = 430

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG   L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRAPLSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|187933753|ref|YP_001884709.1| F0F1 ATP synthase subunit alpha [Clostridium botulinum B str.
           Eklund 17B]
 gi|226739860|sp|B2TJZ8|ATPA_CLOBB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|187721906|gb|ACD23127.1| ATP synthase F1, alpha subunit [Clostridium botulinum B str. Eklund
           17B]
          Length = 504

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 180/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y K +  V  G I  +      V  L      G+ +       D  G  + 
Sbjct: 10  SIIKKEIEKYEKQIKTVDSGTIIQVGDGVSRVYGLDD-CMEGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD+V   G+   +       GRV+N+LG+ +DG   +   +
Sbjct: 66  LEQDNVGCVLLGNEEGIKEGDIVKGSGKIVEVPVGEALIGRVVNSLGEELDGKGPIN-TN 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  ++R  V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 QTRPIEVKAPSIIDRSSVNEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTALVIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   V   +           S++V +T+ +S  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNTLTEMGAMDYSIIVSSTAADSAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF ++G +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMNQGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SKENGGGSLTALPIIETLAGDITAYIPTNVISITDGQIFLESDLFNSGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVTGTLRLELAQYRE---LAAFAQFGSDLDKDSKKRLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QDQ 424


>gi|55976882|gb|AAV68290.1| F1-ATPase alpha subunit [Berlinianche aethiopica]
          Length = 419

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGISRVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTLLNQKQMNSRATSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     + L+ S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVKILSETNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER          G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDNTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|254474827|ref|ZP_05088213.1| ATP synthase F1, alpha subunit [Ruegeria sp. R11]
 gi|214029070|gb|EEB69905.1| ATP synthase F1, alpha subunit [Ruegeria sp. R11]
          Length = 512

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 180/442 (40%), Gaps = 29/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLEADNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGPELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAAERKVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           + +      +                  +   VG++   V + ++          S+VV 
Sbjct: 176 TAVALDAILNQKVYNDAAGDDDSKKLYCVYVAVGQKRSTVAQLVKKLEETGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   L+ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASEPAPLQFLAPYAATAMAEYFRDSGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     +E   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEEFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +++   + + +KQ  
Sbjct: 413 DAATQQLLNRGARLTELMKQPQ 434


>gi|189095369|ref|YP_001936382.1| ATP synthase CF1 alpha subunit [Heterosigma akashiwo]
 gi|157694712|gb|ABV65988.1| ATP synthase CF1 alpha chain [Heterosigma akashiwo]
          Length = 503

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 104/436 (23%), Positives = 187/436 (42%), Gaps = 17/436 (3%)

Query: 4   NLETLAQLAED-----YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N + ++ + ++       +  +   G +  +      V  L + V  G+ +  +      
Sbjct: 5   NPDEISNIIKESILKYTGEQTIENVGTVLQVGDGIARVYGLDE-VMSGELIQFE-DEERT 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G G  I  G  V   G+  +I       GR+++ L  PIDG  
Sbjct: 63  VGIALNLENDNVGAVLMGEGIGILEGSSVTATGKIAQIPVGEGCLGRILDPLANPIDGKG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           ++   +  + I S  P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++
Sbjct: 123 AIAGTETRL-IESMAPGIISRQSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTSI 181

Query: 178 LSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
                 +        +   +G++   V + +      D LK +V+V A ++++  L+ +A
Sbjct: 182 ALDTIINQKTEDVVCVYVAIGQKASSVAQAVTVLEEKDALKYTVIVAANANDAATLQYIA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLL
Sbjct: 242 PYTGAAIAEYFMYKGKATLIIYDDLTKQAQAYRQMSLLLKRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +    G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++
Sbjct: 302 ERAAKLNESMGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSNDLFNSGIRPAIN 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  +L   + +F+E         +   +D    K + +   
Sbjct: 362 VGISVSRVGSAAQIKAMKQVAGTLKLELAQFDELE---AFSQFSSDLDKNTQKQLARGKR 418

Query: 413 IYDFLKQSPSDLSSED 428
           + + LKQ      S +
Sbjct: 419 LRELLKQPQGSPYSVE 434


>gi|117928052|ref|YP_872603.1| flagellar protein export ATPase FliI [Acidothermus cellulolyticus
           11B]
 gi|117648515|gb|ABK52617.1| type III secretion system ATPase, FliI/YscN [Acidothermus
           cellulolyticus 11B]
          Length = 439

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 167/407 (41%), Positives = 243/407 (59%), Gaps = 8/407 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ I  +  T   +     +GD V+ +G+    L +V+ ++ + +   P+G    +++
Sbjct: 27  GRVTGIVGLSITAAGI--RAAIGDVVIVEGR-QPTLAEVVALHDESLACMPLGDVSGVAV 83

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G LV   G    +       GRV++ LG+PIDG   L +  + + + +  P  + R R+ 
Sbjct: 84  GALVTPTGGPLTVPVGDALLGRVLDGLGRPIDGKGEL-RDTIRVGLDATPPHPLRRTRIS 142

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+RV+D  TP   GQR+G+FAGSG+GKS+LLSM AR    D  +I+LVGERGREV
Sbjct: 143 EQLSLGVRVLDTMTPCGRGQRLGIFAGSGVGKSSLLSMIARGTEADVSVIALVGERGREV 202

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+  D   + L +SVVVVATSDE  +LR  A   A  IAE+F   G +V+L++DSITR
Sbjct: 203 REFLENDLGEEGLARSVVVVATSDEPALLRLRAAFVATRIAEWFRDLGRHVILMMDSITR 262

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + REI  + GE    RGYP SVF+ LP+LLER G  E   G+IT + +VLV+GD+ N
Sbjct: 263 FAMAQREIGLSVGEPAATRGYPPSVFALLPKLLERAGAGE--HGSITGLYTVLVEGDDMN 320

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD+ RSILDGH+ L+R LA  G YP VD L S+SRL     +A ++   + L  ++ 
Sbjct: 321 EPIADTARSILDGHVTLSRRLATSGHYPAVDVLESISRLTGAITTAQQRDDATFLRRILA 380

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + R++  IG Y PG +  +D A+   P I DFL+Q    ++  D
Sbjct: 381 AHRDARELIDIGAYVPGSNPDVDTALRLQPRITDFLRQDIRAVTPAD 427


>gi|67537828|ref|XP_662688.1| hypothetical protein AN5084.2 [Aspergillus nidulans FGSC A4]
 gi|40740989|gb|EAA60179.1| hypothetical protein AN5084.2 [Aspergillus nidulans FGSC A4]
          Length = 668

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 102/434 (23%), Positives = 184/434 (42%), Gaps = 27/434 (6%)

Query: 7   TLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
            ++ L E   + L     + + G++ S+         L+  V   + V  +   S   G 
Sbjct: 166 EISSLLEQRIRGLKGSPNLAESGHVLSVCDGIVRARGLT-NVQAEELVEFE---SGVKGM 221

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
            + +  + V I   G    +   + V+  G    +       GRV++ALG PIDG   + 
Sbjct: 222 CMNLESNHVGIVLFGSDRLVKQSEPVWRTGEIVDVPVGPKMLGRVVDALGNPIDGKGPIE 281

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----S 175
             + S   + K P  + R+ V +  +TG++ ID   P+  GQR  +      GK      
Sbjct: 282 TTERSRAQI-KAPGILPRRSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAIALD 340

Query: 176 TLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPI 229
           T+L+    +   D       +   VG++   V + ++    ++  K S+VV AT+ E+  
Sbjct: 341 TILNQKIWNKSDDESKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAP 400

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP     + E+F   G + ++I D +++ A + R+++      P    YP  VF  
Sbjct: 401 LQYIAPFAGCAMGEWFRDHGRHAIIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYL 460

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +   G++TA+  +   G + +  I  +V SI DG I L   L   G 
Sbjct: 461 HSRLLERAAKLNDKHGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIYLESELFNRGI 520

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K++  SL   + ++ E   I     +   +D    + +
Sbjct: 521 RPAINVGLSVSRVGSAAQVRAMKQVAGSLKLYLAQYRE---IAAFSQFGSDLDAATKQTL 577

Query: 408 HQVPIIYDFLKQSP 421
            +   + + LKQ  
Sbjct: 578 RRGEHLTELLKQKQ 591


>gi|241948767|ref|XP_002417106.1| ATP alpha synthase chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223640444|emb|CAX44696.1| ATP alpha synthase chain, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 546

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 103/446 (23%), Positives = 187/446 (41%), Gaps = 27/446 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + ED  + +  +      G + S+      +  L+      + V     +S
Sbjct: 40  KAAPTEVSSILEDRIRGVSEEANLNETGRVLSVGDGIARIYGLNNIQAE-ELVEF---SS 95

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V +   G    +  G+ V   G+    P      GRV++ LG PIDG
Sbjct: 96  GAKGMALNLEADQVGVVLFGSDRLVKEGETVKRTGQIVSVPIGPELLGRVVDGLGNPIDG 155

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 156 KGPIKAAAYSRA-QVKAPGILPRRSVHEPMQTGLKSVDALVPIGRGQRELIIGDRQTGKT 214

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                 +L+    ++  D       +   VG++   V + ++     D LK SV+V AT+
Sbjct: 215 AVALDAILNQKRWNNGSDEKKKLYCVYVAVGQKRSTVAQLVQTLEQHDALKYSVIVAATA 274

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA  I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 275 SEAAPLQYIAPFTACAIGEWFRDNGRHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 334

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER          G++TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 335 DVFYLHSRLLERAAKMSDAYGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAEL 394

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 395 FYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 451

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSED 428
             + +++   +   LKQ   +  + +
Sbjct: 452 TKQTLNRGERLTQLLKQKQYNPLAAE 477


>gi|6561622|gb|AAF16966.1|AF197634_1 ATPase alpha subunit [Pachysandra procumbens]
          Length = 420

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGASESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 405


>gi|254460469|ref|ZP_05073885.1| ATP synthase F1, alpha subunit [Rhodobacterales bacterium HTCC2083]
 gi|206677058|gb|EDZ41545.1| ATP synthase F1, alpha subunit [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 512

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 179/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGKDAEVAEVGRVLSVGDGIARVHGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V        +       GRV++ LG P+D
Sbjct: 59  --IQGMALNLETDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPVGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K    +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTTKRVVAEVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           + +      +                  +   +G++   V + ++          S+VV 
Sbjct: 176 TAVALDAMLNQKSYNEAAGDDENKKLYCVYVAIGQKRSTVAQLVKKLEESGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   L+ +AP  A ++AE+F   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASEPAPLQFLAPYAATSMAEHFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDNGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFFQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|227513064|ref|ZP_03943113.1| F0F1 ATP synthase subunit alpha [Lactobacillus buchneri ATCC 11577]
 gi|227083639|gb|EEI18951.1| F0F1 ATP synthase subunit alpha [Lactobacillus buchneri ATCC 11577]
          Length = 522

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y   L V + G ++ +         L   +  G+ +          G V  
Sbjct: 10  ALIKQQLQGYQNELDVKETGIVTYVGDGIARAHGLENALS-GELLDF---GHGVFGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N+LG+PIDG   + K D
Sbjct: 66  LEANDVGIMVLGDDTNIREGDSVKRTGRIMEVPVGDDMIGRVVNSLGQPIDGKGPI-KAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
               I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 DHKAIEHKAPGVMDRKSVFEPLQTGIKSIDSLIPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D   K I   +G++   VR  +        +  + V+ A   E   L  +AP    T
Sbjct: 185 NQKDQNMKCIYVAIGQKESTVRASVSTLEKFGAMDYTTVISAGPSEPASLLYIAPYAGAT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A++ RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMHKGQHVLIVYDDLSKQANAYRELSLILRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+      G  P VD   SVS
Sbjct: 305 SDKLGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAVDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVAGTLRLDLASYHELESFAQFG---SDLDEATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|188587639|ref|YP_001919896.1| F0F1 ATP synthase subunit alpha [Clostridium botulinum E3 str.
           Alaska E43]
 gi|251778533|ref|ZP_04821453.1| ATP synthase F1, alpha subunit [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|226739859|sp|B2UZJ8|ATPA_CLOBA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|188497920|gb|ACD51056.1| ATP synthase F1, alpha subunit [Clostridium botulinum E3 str.
           Alaska E43]
 gi|243082848|gb|EES48738.1| ATP synthase F1, alpha subunit [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 504

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 103/423 (24%), Positives = 180/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y K +  V  G I  +      V  L      G+ +       D  G  + 
Sbjct: 10  SIIKKEIEKYEKQIKTVDSGTIIQVGDGVSRVYGLDD-CMEGELLEFPN---DVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD+V   G+   +       GRV+N+LG+ +DG   +   +
Sbjct: 66  LEQDNVGCVLLGNEEGIKEGDIVKGSGKIVEVPVGEALIGRVVNSLGEELDGKGPIN-TN 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  ++R  V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 QTRPIEVKAPSIIDRSSVNEPLQTGIKAIDSMIPIGKGQRELIIGDRQTGKTALVIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   V   +           S++V +T+ +S  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNTLTEMGAMDYSIIVSSTAADSAPLQYLAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF ++G +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEYFMNQGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYIHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G++TA+  +     +    I  +V SI DG I L   L   G+ P V+   SVS
Sbjct: 305 SEENGGGSLTALPIIETLAGDITAYIPTNVISITDGQIFLESDLFNSGQRPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    K + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVTGTLRLELAQYRE---LAAFAQFGSDLDKDSKKRLEKGKRLVEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QDQ 424


>gi|269925187|ref|YP_003321810.1| ATP synthase F1, alpha subunit [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269788847|gb|ACZ40988.1| ATP synthase F1, alpha subunit [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 508

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 175/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E + +  E + + +V  + G +  +         LS  V   + V  +       G  + 
Sbjct: 10  EIIKKQIESFGQPVVTAEVGTVVEVGDGIARAYGLS-GVKASELVQFENG---VYGLALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I  +G   +I  G  V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEEDNVGIVILGPYTDIEEGQQVRSTGRVVDVPVGDELIGRVVNPLGEPIDGKGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  + R+ V+   +TGI+ ID   P+  GQR  +      GKS +      
Sbjct: 126 RRV-IERIAPGVVARKSVDTPVQTGIKAIDSMIPIGRGQRELIIGDRQTGKSAIAIDTII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++  +V + +         + ++VV A +D+   L+ +AP     
Sbjct: 185 NQKGKDLICIYVAIGQKTSKVAQVVATLEEYGAMEHTIVVAANADDPASLQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F  +G + L++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMEQGRDALVVYDDLSKHAAAYREISLLLRRPPGREAYPGDVFYLHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +    ++ +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDEYGGGSLTALPIIETQANDVSAYIPTNVISITDGQIYLESDLFYAGIRPAINVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   +++   L   + +F   R +     +   +D      + +   + + LK
Sbjct: 365 RVGGAAQTKAMRQVAGKLRLDLAQF---RSLAAFAQFGSDLDKATRAQLERGQRLTEVLK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|309322172|ref|YP_003934087.1| ATP synthase CF1 alpha subunit [Geranium palmatum]
 gi|197132394|gb|ACH47715.1| ATP synthase CF1 alpha subunit [Geranium palmatum]
 gi|300069265|gb|ADJ66386.1| ATP synthase CF1 alpha subunit [Geranium palmatum]
          Length = 504

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 186/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  ++Y++ + +V  G +  +      +  L++ V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIKEYNREVKIVNMGTVLRVGDGIARIYGLNE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLMIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +        ++VV  T+     L+ +AP T   +A
Sbjct: 188 QGKDVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 NLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---AFAQFASDLDQNTQNQLERGRRLRELLKQS 424

Query: 421 PSDL 424
            S+ 
Sbjct: 425 QSEP 428


>gi|114419|sp|P12862|ATPAM_WHEAT RecName: Full=ATP synthase subunit alpha, mitochondrial
          Length = 509

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 98/442 (22%), Positives = 175/442 (39%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G+ TA+  +     + +  I  +V SI DG I L   +
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICLETDV 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 SQALLNRGARLTEVPKQPQYEP 438


>gi|227510135|ref|ZP_03940184.1| F0F1 ATP synthase subunit alpha [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190340|gb|EEI70407.1| F0F1 ATP synthase subunit alpha [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 522

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y   L V + G ++ +         L   +  G+ +          G V  
Sbjct: 10  ALIKQQLQGYQNELDVKETGIVTYVGDGIARAHGLENALS-GELLDF---GHGVFGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N+LG+PIDG   + K D
Sbjct: 66  LEANDVGIMVLGDDTNIREGDSVKRTGRIMEVPVGDDMIGRVVNSLGQPIDGKGPI-KAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
               I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 DHKAIEHKAPGVMDRKSVFEPLQTGIKSIDSLIPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D   K I   +G++   VR  +        +  + V+ A   E   L  +AP    T
Sbjct: 185 NQKDQNMKCIYVAIGQKESTVRASVSTLEKFGAMDYTTVISAGPSEPASLLYIAPYAGAT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL+I D +++ A++ RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMHKGQHVLIIYDDLSKQANAYRELSLILRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+      G  P VD   SVS
Sbjct: 305 SDKLGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAVDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVAGTLRLDLASYHELESFAQFG---SDLDEATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|210623311|ref|ZP_03293728.1| hypothetical protein CLOHIR_01678 [Clostridium hiranonis DSM 13275]
 gi|210153712|gb|EEA84718.1| hypothetical protein CLOHIR_01678 [Clostridium hiranonis DSM 13275]
          Length = 497

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 115/433 (26%), Positives = 185/433 (42%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N E ++ +     K+      +   G I ++     ++  L   V  G+ +   G  
Sbjct: 1   MGLNPEEISSIIRLQIKDYDNRVELSDTGKIFNVGDNIASIYGLDD-VMAGELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  + V    +G  E I   D+V   G+   +       GRV++ LG PID
Sbjct: 59  --VYGMALNLEKETVGAVLLGDEEGIKEDDIVKRTGKIVEVPVGDALIGRVVDPLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+ K D +  I ++ P  M+R+ V +  +TGI+ ID   P+  GQR  V      GK
Sbjct: 117 GRGSI-KTDKTRPIEAEAPGIMDRRSVYQPLQTGIKAIDAMVPIGKGQRELVIGDKQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +++L+    +        I   +G++   V + +           ++VV AT+ ES  L+
Sbjct: 176 TSILTDTILNQKGKDIICIYVAIGQKKSTVAQLVSSLRDYGAMDYTIVVSATASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F  +G +VL+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGTAMGEEFMYQGKDVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSAKLSDELGGGSMTAIPVIETQEGDVSSYIPTNVISITDGQIYLQPELFHSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VDP  SVSR+   A     KKL S L     ++ E   +     +   +D      + Q
Sbjct: 356 AVDPGISVSRVGGAAQIKSMKKLASELKLAYSQYRE---LAAFSQFGSDLDADTKARLEQ 412

Query: 410 VPIIYDFLKQSPS 422
              I + LKQ   
Sbjct: 413 GERIVEILKQDEH 425


>gi|15615018|ref|NP_243321.1| flagellum-specific ATP synthase [Bacillus halodurans C-125]
 gi|10175075|dbj|BAB06174.1| flagellar-specific ATP synthase [Bacillus halodurans C-125]
          Length = 437

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 249/419 (59%), Gaps = 10/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G ++ +     T+        +G+    +   + +  + +V+    + V + P+    EI
Sbjct: 20  GKVTRVIG--LTIEAKGPQASIGELCYILVGKQGTKVMAEVVGFKEERVLLMPLNGTAEI 77

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G LV   GR  ++       G VI+  G+P+ G ++L  G       +  P  ++R R
Sbjct: 78  APGSLVEGTGRPLQVKVGYSLIGHVIDGCGRPLTG-EALPNGLTPYPTDNPPPNPISRPR 136

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +++    G+R ID    +  GQR+G+FAGSG+GKSTLL+M A++   D  II+L+GERGR
Sbjct: 137 IKEAMHLGVRAIDGLLTVGKGQRVGIFAGSGVGKSTLLAMLAKNAAADLNIIALIGERGR 196

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV++FI  D   D L++S++VVATSD+  ++R    +TA  +AEYF  +G +V L++DS+
Sbjct: 197 EVKDFIERDLGEDGLRRSIIVVATSDQPALMRIKGAMTATALAEYFRDQGLHVNLMMDSV 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI    GE P  +GY  SVF+ LP+LLER G + K  G+IT   +VLVDGD+
Sbjct: 257 TRFAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNGK--GSITGFYTVLVDGDD 314

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PI+D+VR ILDGH VL+R LA +G YP ++ L SVSR+ +   + ++K+    +  L
Sbjct: 315 LNEPISDTVRGILDGHFVLDRELANKGHYPAINILKSVSRVMNDIVTDEQKRAAEHVRSL 374

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEITKKL 437
           +  ++E+ D+  IG Y+ G    +D+A+ + P +  FL+Q+  +++ +E   Q++ +  
Sbjct: 375 LSVYKESEDLINIGAYKRGSSKQIDEAIERQPEVISFLRQNTDEVAIAEHSIQQLIQAF 433


>gi|194757070|ref|XP_001960788.1| GF13537 [Drosophila ananassae]
 gi|190622086|gb|EDV37610.1| GF13537 [Drosophila ananassae]
          Length = 552

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 182/422 (43%), Gaps = 23/422 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNEGQDESKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          SV+V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 244 IYVAIGQKRSTVAQIVKRLTDSGAMDYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSS 426
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ     +S 
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSI 480

Query: 427 ED 428
           ED
Sbjct: 481 ED 482


>gi|194291168|ref|YP_002007075.1| F0F1 ATP synthase subunit alpha [Cupriavidus taiwanensis LMG 19424]
 gi|193225003|emb|CAQ71014.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Cupriavidus
           taiwanensis LMG 19424]
          Length = 514

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 105/446 (23%), Positives = 181/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +     L     V   G + S+T     V  LS  V  G+ +   G  
Sbjct: 2   MQLNPSEISELIKTRISGLGAEAEVRNTGTVISVTDGICRVHGLS-GVMQGEMLEFPG-- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+N LG+PID
Sbjct: 59  -NTFGLALNLERDSVGAVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 118 GKGPINAKETDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +           +VVV A + +S  ++
Sbjct: 177 TAVAVDAIINQKGKGVFCVYVAIGQKASTIANVVRKLEEHGAMEYTVVVAAAASDSAAMQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 237 YLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 297 RLLERAARVNADYVEKFTNGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 356

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 357 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKNLSGGIRTDLAQYRE---LAAFAQFASD 413

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 414 LDDATRKQLERGRRVTELLKQPQYQP 439


>gi|126736544|ref|ZP_01752284.1| ATP synthase F1, alpha subunit [Roseobacter sp. CCS2]
 gi|126713857|gb|EBA10728.1| ATP synthase F1, alpha subunit [Roseobacter sp. CCS2]
          Length = 511

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 104/446 (23%), Positives = 185/446 (41%), Gaps = 28/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MAIQASEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IRGMALNLEADNVGVVIFGSDRDIKEGDTVKRTKSIVDVPIGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     ++   SK P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKRAVA-DSKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
                 T+L+  + +D           +   VG++   V + ++       +  S+VV A
Sbjct: 176 TAVALDTMLNQKSYNDAATEEGQKLYCVYVAVGQKRSTVAQLVKKLEESGAIDYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP  A  +AE+F   G + L+I D +++ A S R+++      P    Y
Sbjct: 236 TASDPAPMQFLAPYAATAMAEHFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSSKLNEDNGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D
Sbjct: 356 ELFYQGIRPAVNTGLSVSRVGSAAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
               + +++   + + +KQ      +
Sbjct: 413 AATQQLLNRGARLTELMKQPQYSPLT 438


>gi|260813788|ref|XP_002601598.1| hypothetical protein BRAFLDRAFT_85833 [Branchiostoma floridae]
 gi|229286897|gb|EEN57610.1| hypothetical protein BRAFLDRAFT_85833 [Branchiostoma floridae]
          Length = 526

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V I   G  + I
Sbjct: 44  ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLEPDNVGIVVFGNDKLI 99

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG+PIDG   +   D    +  K P  + R  
Sbjct: 100 KEGDIVKRTGAIVDVPVGEEILGRVVDALGEPIDGKGPIQSSD-RRRVGLKAPGIIPRIS 158

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V++   TGI+ +D   P+  GQR  +      GK+ L      +                
Sbjct: 159 VKEPMLTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKGFNEAQDEKKKLYC 218

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ E+F   G
Sbjct: 219 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEFFRDNG 278

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 279 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSYGGGSL 338

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 339 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 398

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D      + +   + + LKQ  
Sbjct: 399 AMKQVSGSMKLELAQYRE---VAAFAQFGSDLDASTQALLSRGVRLTELLKQGQ 449


>gi|6561668|gb|AAF17012.1|AF197680_1 ATPase alpha subunit [Idiospermum australiense]
          Length = 421

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 175/417 (41%), Gaps = 23/417 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I 
Sbjct: 1   FGRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIK 56

Query: 83  LGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V
Sbjct: 57  EGDLVKRTGSIVDVPAGKAMLGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSV 115

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KV 190
            +  +TG++ +D   P+  GQR  +      GK+ +      +                 
Sbjct: 116 HEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYC 175

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G
Sbjct: 176 VYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNG 235

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++
Sbjct: 236 MHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSL 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A   
Sbjct: 296 TALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLK 355

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             K++  SL   + ++ E   +     +   +D +    +++   + + LKQ   + 
Sbjct: 356 AMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVLKQPQYEP 409


>gi|58040126|ref|YP_192090.1| flagellum-specific ATP synthase [Gluconobacter oxydans 621H]
 gi|58002540|gb|AAW61434.1| Flagellum-specific ATP synthase [Gluconobacter oxydans 621H]
          Length = 452

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 177/440 (40%), Positives = 266/440 (60%), Gaps = 12/440 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           LE L+ L  D+        G +  +  +  TV  L  ++ +GD V  +  +   +  +V+
Sbjct: 8   LERLSNLTCDW------VVGSVKDVIGLCLTVIGLEGFITIGDRVAVKALDGRVVQSEVV 61

Query: 64  RINLDIVYICPVGIGEEISLGDLVF-HWGRFR--ISPSACWCGRVINALGKPIDGDDSLG 120
               D+  +   G  + I  G        R    +  +  W GRV++ LG+PIDG   L 
Sbjct: 62  GFQGDVARLMSFGPLDGIGPGCEARIPLNRHDGGLGVNESWLGRVLDPLGQPIDGKGPLF 121

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  +    P A +R R+ +    G+R +D FT    GQR+G+FAGSG+GKSTLLSM
Sbjct: 122 PSFERQPVQCPPPNAASRARLGERIDLGVRALDTFTTCRRGQRLGLFAGSGVGKSTLLSM 181

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR    D  +ISLVGERGREVREFIED LG + L +SV+V+ATSD  P++R+ A L+A+
Sbjct: 182 LARGADCDVAVISLVGERGREVREFIEDDLGPEGLARSVLVIATSDSPPLMRREAALSAM 241

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAEYF ++G +VLL++DS+TRF  ++REI  ++GE P  RGYP SVF+ELPRLLER GP
Sbjct: 242 AIAEYFRNQGKSVLLLMDSVTRFCMALREIGLSAGEPPATRGYPPSVFAELPRLLERAGP 301

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
              ++G ITA+ +VLV+GD+ N+P+AD+VR ILDGHI+L+R + E+GRYP +D L S+SR
Sbjct: 302 GYADQGMITALFTVLVEGDDQNEPVADAVRGILDGHIILDRKIGEQGRYPAIDVLRSLSR 361

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +E  L       +  ++   D+  +G Y+PG D  +D+A+  +P + +FL Q
Sbjct: 362 AVPGCNSPEENALTQRARAAMATYQRMADMIRLGAYKPGTDREVDEAIALMPKLNEFLSQ 421

Query: 420 SPSDLSS-EDVFQEITKKLQ 438
             ++ ++  + F+++ + +Q
Sbjct: 422 GRNERTTRAEAFEQLAQIMQ 441


>gi|299745096|ref|XP_001831471.2| ATP synthase F1 [Coprinopsis cinerea okayama7#130]
 gi|298406431|gb|EAU90318.2| ATP synthase F1 [Coprinopsis cinerea okayama7#130]
          Length = 554

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 181/424 (42%), Gaps = 22/424 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L + V   + V     +S   G  + +  D V +   G   
Sbjct: 70  VEETGRVLSVGDGIGRVWGL-RNVQAEEMVEF---SSGVRGMCLNLEADNVGVSIFGNDR 125

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GD V   G+   +       GRV+NALG PIDG   +   +     + K P  + R
Sbjct: 126 LIKEGDTVKRTGQIVDVPVGPGLLGRVVNALGDPIDGKGPIEATERRRASL-KAPGILPR 184

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----- 188
           + V +   TG++ ID   P+  GQR  +      GK      T+L+    ++  D     
Sbjct: 185 RSVNQPMMTGLKPIDAMVPIGRGQRELIIGDRQTGKTAVAIDTILNQKRWNEGNDESKKL 244

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   VG++   V + ++    ++  K +++V AT+ E+  L+ +AP +   + E+F  
Sbjct: 245 YCVYVAVGQKRSTVAQLVKTLEENDAMKYTIIVAATASEAAPLQYLAPFSGCAMGEWFRD 304

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KG 305
            G + L++ D +++ A + R+++      P    YP  VF    RLLER      +   G
Sbjct: 305 NGKHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKFGGG 364

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L   G  P ++   SVSR+   A 
Sbjct: 365 SLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFRGVRPAINVGLSVSRVGSAAQ 424

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   KK   SL   + ++ E   +     +   +D      + +   + + LKQ      
Sbjct: 425 TKIMKKFAGSLKLYLAQYRE---VAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPL 481

Query: 426 SEDV 429
           + +V
Sbjct: 482 ATEV 485


>gi|161523284|ref|YP_001578296.1| F0F1 ATP synthase subunit alpha [Burkholderia multivorans ATCC
           17616]
 gi|189351943|ref|YP_001947571.1| F0F1 ATP synthase subunit alpha [Burkholderia multivorans ATCC
           17616]
 gi|221202180|ref|ZP_03575215.1| ATP synthase F1, alpha subunit [Burkholderia multivorans CGD2M]
 gi|221208759|ref|ZP_03581758.1| ATP synthase F1, alpha subunit [Burkholderia multivorans CGD2]
 gi|221214290|ref|ZP_03587262.1| ATP synthase F1, alpha subunit [Burkholderia multivorans CGD1]
 gi|226739854|sp|A9AJG2|ATPA_BURM1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160340713|gb|ABX13799.1| ATP synthase F1, alpha subunit [Burkholderia multivorans ATCC
           17616]
 gi|189335965|dbj|BAG45035.1| F-type H+-transporting ATPase alpha chain [Burkholderia multivorans
           ATCC 17616]
 gi|221165945|gb|EED98419.1| ATP synthase F1, alpha subunit [Burkholderia multivorans CGD1]
 gi|221171391|gb|EEE03839.1| ATP synthase F1, alpha subunit [Burkholderia multivorans CGD2]
 gi|221177974|gb|EEE10386.1| ATP synthase F1, alpha subunit [Burkholderia multivorans CGD2M]
          Length = 513

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELIGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|323140891|ref|ZP_08075804.1| ATP synthase F1, alpha subunit [Phascolarctobacterium sp. YIT
           12067]
 gi|322414629|gb|EFY05435.1| ATP synthase F1, alpha subunit [Phascolarctobacterium sp. YIT
           12067]
          Length = 607

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L+   E+Y+ +  + + G +  I     TV  + +    G+ V       +  G V+ 
Sbjct: 112 DALSNKLENYNVDADLEEVGIVEKIGDGIATVIGM-KNAMAGELVELP---HNVSGMVLN 167

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +N D V I  +G   +I  GD+V   GR   +       GRV++A+G PIDG   +   +
Sbjct: 168 LNPDSVGIVLMGGETKIKEGDVVRRTGRIMEVPVGENLLGRVVSAIGDPIDGKGEIAAAE 227

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + S      +R+ V+   +TGI+ ID   P+  GQR  +    G GK+ +      
Sbjct: 228 -RRPVESPAHGIADRKSVDTPLQTGIKCIDALVPIGRGQRELIIGDRGTGKTAVAIDTII 286

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   +   +           +++V AT+ +S  L+ +AP   VT
Sbjct: 287 NQKGLGVICIYVAIGQKASNIARIVRTLEQHGAMEYTIIVAATAADSAPLQYLAPYAGVT 346

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G +VL + D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 347 MAEYFMDQGKDVLCVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 406

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     +    I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 407 NDELKGGSITALPIIETLAGDVGGFIPTNVISITDGQIFLESELFYSGIRPAINSGLSVS 466

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + +F E   +     +   +D      + +   + + LK
Sbjct: 467 RVGGAAQIKAMKQVAGTLRLDLAQFRE---LAAFAQFASDLDKATKAQLDRGQRLTEVLK 523

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 524 QGQYSPLSVE 533


>gi|290490208|gb|ADD31511.1| ATP synthase CF1 alpha subunit protein [Plumbago auriculata]
          Length = 507

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 106/429 (24%), Positives = 186/429 (43%), Gaps = 15/429 (3%)

Query: 7   TLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            + +    Y++ + ++  G +  +      +  L + V  G+ V  +      +G  + +
Sbjct: 12  NIRERIGQYNREVKILNTGTVLQVGDGIARIRGLDE-VMSGELVEFEEG---TIGIALNL 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   + 
Sbjct: 68  ESKNVGVVLMGDGLMIQEGSSVKARGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSEF 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +
Sbjct: 128 RL-IDSPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILN 186

Query: 185 DCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTI 241
                VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +
Sbjct: 187 QKGQNVICVYVAIGQKASSVAQVVATFQEKGAMEYTIVVAETADSPATLQYLAPYTGAAL 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S 
Sbjct: 247 AEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSS 306

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR
Sbjct: 307 SHLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++   L   + +F E         +   +D +    + +   + + LKQ
Sbjct: 367 VGSAAQIKAMKQVAGKLKLELAQFTELE---AFAQFASDLDKVTQNQLARGQRLRELLKQ 423

Query: 420 SPSDLSSED 428
           S S     +
Sbjct: 424 SQSSPLPVE 432


>gi|194333106|ref|YP_002014966.1| F0F1 ATP synthase subunit alpha [Prosthecochloris aestuarii DSM
           271]
 gi|194310924|gb|ACF45319.1| ATP synthase F1, alpha subunit [Prosthecochloris aestuarii DSM 271]
          Length = 526

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 98/445 (22%), Positives = 179/445 (40%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K L      A+ Y        G +  +      +  LS+ V  G+ +   GK    +G
Sbjct: 14  LRKQLAGFESEADVYD------VGTVLQVGDGIARIYGLSK-VAAGELLEFPGK---IMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G  + +  GD V   G    I       GRVIN LG+PIDG  S+
Sbjct: 64  MALNLEEDNVGAVMFGGADIVKEGDTVKRTGILASIPVGEAMLGRVINPLGEPIDGKGSI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              ++ + +  + P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 -ATEIRLPLERRAPGVIFRKSVHEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAVAI 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
               +        I    G++   + + +        ++ + V+ A++ +   L+ ++P 
Sbjct: 183 DTIINQKGKGVYCIYVATGQKSSTIAQVVSTLEKFGAMEYTTVIAASASDPAPLQYISPY 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              T+ EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER
Sbjct: 243 AGATLGEYFRDTGRHALVIYDDLSKQAVAYRQLSLLLRRPPGREAFPGDVFYVHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDIDVAKKMNDLPDALKPMVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLESNLFNAGQRPAINVGISVSRVGGSAQIKAMKKISGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKATKAQLDRGERLVEILKQGQ 444


>gi|291510238|gb|ADE10075.1| F1 ATPase alpha [Tremella fuciformis]
          Length = 545

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 105/429 (24%), Positives = 187/429 (43%), Gaps = 22/429 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + +I      V  L + V   + V     +S   G  + +  D V +   G   
Sbjct: 61  VQETGRVLTIGDGIARVYGL-RNVQAEEMVEF---SSGVRGMCLNLEADNVGVTIFGNDR 116

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GD V   G+   +       GRV++ALG PIDG   + K +   +   K P  + R
Sbjct: 117 LIKEGDTVKRTGQIVDVPVGPGLLGRVVDALGNPIDGKGPI-KAEGRTKAQLKAPGILPR 175

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----- 188
           + V +  +TG++ +D   P+  GQR  +      GK      T+L+    +D  D     
Sbjct: 176 RSVHEPMQTGLKSVDSLVPIGRGQRELIIGDRQTGKSAVAIDTILNQKKWNDGADESKKL 235

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   VG++   V + ++    ++  K S++V AT+ E+  L+ +AP +   + E+F  
Sbjct: 236 YCVYVAVGQKRSTVAQLVKTLEENDAMKYSIIVAATASEAAPLQYLAPFSGCAMGEWFRD 295

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG-- 305
            G + L+I D +++ A + R+++      P    YP  VF    RLLER     K+ G  
Sbjct: 296 NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKDYGAG 355

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A 
Sbjct: 356 SLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFKGVRPAINVGLSVSRVGSAAQ 415

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   K +  SL   + ++ E   +     +   +D      +++   + + LKQ   +  
Sbjct: 416 TKLMKSVAGSLKLYLAQYRE---VAAFAQFGSDLDASTRYLLNRGSRLTELLKQPQYNPM 472

Query: 426 SEDVFQEIT 434
             +V   + 
Sbjct: 473 PTEVMAPLI 481


>gi|55976896|gb|AAV68297.1| F1-ATPase alpha subunit [Rhizanthes infanticida]
          Length = 419

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-MKAGEMVEFA---SGVKGIALNLENENVGIVFFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  ++   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGAISDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIFNQKQMNSKATSESETLSCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|11263|emb|CAA48649.1| ATPase subunit [Beta vulgaris subsp. vulgaris]
 gi|396760|emb|CAA48650.1| ATPase subunit [Beta vulgaris subsp. vulgaris]
          Length = 506

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 175/439 (39%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTNLLESRITNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   VG++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQLNSKATSESETLYCVYDAVGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVPKQPQ 435


>gi|269837452|ref|YP_003319680.1| ATP synthase F1, alpha subunit [Sphaerobacter thermophilus DSM
           20745]
 gi|269786715|gb|ACZ38858.1| ATP synthase F1, alpha subunit [Sphaerobacter thermophilus DSM
           20745]
          Length = 507

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 183/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q  E+Y   +VV   GY+  +     TV  L + V   + V         +G    
Sbjct: 10  DILRQQIENYGSRMVVTNVGYVVEVGDGIATVHGL-RDVMASELVEFSNG---VMGMAFN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G   +I  GD V   GR  ++       GRV+NALG+PIDG   + + D
Sbjct: 66  LEEDSVGVIILGDYTDIEEGDEVKATGRIAQVPVGPALLGRVVNALGEPIDGKGPI-QTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +    P  + RQ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 RFRPLERIAPGVVARQNVDTALQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 184 S--DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVT 240
           +  D     I   +G++  +V + +     +   + ++VVVA++ +   L+ +AP     
Sbjct: 185 NQRDTGVVSIYVAIGQKQSQVAQIVATLEREGAMENTIVVVASAADPAPLQYLAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E     G + L++ D +++ A + R++A      P    YP  VF    RLLER    
Sbjct: 245 MGEEVMESGGHALVVYDDLSKHAWAYRQVALLQRRPPGREAYPGDVFYLHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +   G++ +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 RDDLGGGSLTALPIIETQGNDVSAYIPTNVISITDGQIYLEPDLFYAGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     +++   L   + ++   R +     +   +D    + + +   + + LK
Sbjct: 365 RVGGDAQIRAMRQVAGRLRLELAQY---RSLAAFAQFGSDLDPATKRQIDRGQRLTEVLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPQYQP 427


>gi|212639564|ref|YP_002316084.1| flagellum-specific ATP synthase [Anoxybacillus flavithermus WK1]
 gi|212561044|gb|ACJ34099.1| Flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Anoxybacillus flavithermus WK1]
          Length = 437

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 159/423 (37%), Positives = 246/423 (58%), Gaps = 11/423 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQG--KNSDNLGQVIRINLDIVYICPVGIG 78
           + G ++ +  +   +        +GD   +H G  K      +V+    + V + P    
Sbjct: 18  RFGKVTRVIGLM--IEAKGPESSIGDVCYIHIGHKKKKKIQAEVVGFRDEYVLLMPYATV 75

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           ++I+ G +V   G    +   +   GRVI+ALG P+D D    KG  ++ I  + P  M 
Sbjct: 76  QDIAPGCIVEATGGPLEMKVGSALVGRVIDALGAPLD-DQPFPKGLTAVPIDRQPPNPMT 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + +  + G+++ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+L+GE
Sbjct: 135 RPPISEPIEVGVKMIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARNTNADLNVIALIGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI  D   + LK+S+V+VATSD+  ++R     TA  IAEYF  +G NV+ ++
Sbjct: 195 RGREVREFIERDLGPEGLKRSIVIVATSDQPALMRIKGAYTATAIAEYFRDQGLNVMFMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + RE+    GE P  +GY  SVF+ LP+LLER G +E   G ITA  +VLVD
Sbjct: 255 DSVTRVAMAQREVGLAVGEPPTTKGYTPSVFAILPKLLERTGTNE--HGTITAFYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PIAD+VR ILDGH VL R LA +G+YP ++ L SVSR+ +   + + +K+   L
Sbjct: 313 GDDMNEPIADTVRGILDGHFVLERQLANKGQYPAINVLKSVSRVMNYIVTPEHRKVAEKL 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435
             L+  + ++ D+  IG Y+ G    +D+A+   P I  FLKQ   +  +  +  Q++ +
Sbjct: 373 RELLATYVQSEDLIQIGAYKRGSSREIDEAIRYYPKIISFLKQDVHECYTINESVQQLFQ 432

Query: 436 KLQ 438
            ++
Sbjct: 433 LIE 435


>gi|89095628|ref|ZP_01168522.1| F0F1 ATP synthase subunit alpha [Bacillus sp. NRRL B-14911]
 gi|89089374|gb|EAR68481.1| F0F1 ATP synthase subunit alpha [Bacillus sp. NRRL B-14911]
          Length = 502

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 180/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N      V   G +  I         L   V  G+ V      
Sbjct: 1   MSIKAEEISALIKKQIENYQSEIQVSDVGTVIQIGDGIARAHGL-DNVMAGELVEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VMGMAQNLEENNVGIIILGPYTEIREGDEVRRTGRIMEVPVGPELIGRVVNPLGQPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    ++  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GMGPINTT-VTRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +   + ++  + D     I   +G++   VR  +E        + ++VV A++ +   L 
Sbjct: 176 TSVAIDTILNQKDQDMVCIYVAIGQKESTVRNAVETLRKTGALEYTIVVTASASQPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ E F   G +VL++ D +T+ A + RE++      P    YP  VF    
Sbjct: 236 FLAPYAGVTMGEEFMYNGKHVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER       KG  +ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDAKGAGSITALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E         +   +D      +++
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNR 412

Query: 410 VPIIYDFLKQSPS 422
                + LKQ  +
Sbjct: 413 GARTVEVLKQDLN 425


>gi|51209988|ref|YP_063652.1| ATP synthase CF1 alpha subunit [Gracilaria tenuistipitata var.
           liui]
 gi|75289852|sp|Q6B8Q8|ATPA_GRATL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|50657742|gb|AAT79727.1| ATP synthase CF1 alpha subunit [Gracilaria tenuistipitata var.
           liui]
          Length = 503

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 179/423 (42%), Gaps = 15/423 (3%)

Query: 7   TLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            + Q  + Y + + V   G +  +      V  L + V  G+ +  + +    +G  + +
Sbjct: 12  VIRQQIDKYEQEIQVANIGTVLQVGDGIARVYGLDE-VMAGELLEFEDQ---TIGIALNL 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             D V +  +G G  I  G  V   G+  +I     + GRV++ L +PID    L     
Sbjct: 68  ESDNVGVVLMGEGRNILEGSSVKATGKIAQIPVGDAFLGRVVDPLARPIDAKG-LPNSSG 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  I S  P  + RQ V +  +TGI  ID   P+  GQR  +      GK+ +      +
Sbjct: 127 TRLIESYAPGIIGRQSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTAVALDTIIN 186

Query: 185 DCF--DKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
                   I   +G++   V + +        L  ++VV + +D+   L+ +AP T   +
Sbjct: 187 QKGQDVVCIYVAIGQKASSVAQVVSTLQDESALDYTIVVASNADDPATLQYIAPYTGAAL 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP-- 299
           AEYF  KG   L++ D +T+ A + R+++      P    YP  VF    RLLER     
Sbjct: 247 AEYFMYKGKATLVVYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 306

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           SE   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR
Sbjct: 307 SELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++   L   + +F E         +   +D      + +   + + LKQ
Sbjct: 367 VGSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLSRGQRLREILKQ 423

Query: 420 SPS 422
           + +
Sbjct: 424 AQN 426


>gi|6561623|gb|AAF16967.1|AF197635_1 ATPase alpha subunit [Sarcococca confusa]
          Length = 421

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGASESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|225159028|ref|ZP_03725338.1| Sodium-transporting two-sector ATPase [Opitutaceae bacterium TAV2]
 gi|224802407|gb|EEG20669.1| Sodium-transporting two-sector ATPase [Opitutaceae bacterium TAV2]
          Length = 461

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 177/434 (40%), Positives = 248/434 (57%), Gaps = 10/434 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRIN 66
           A   +      + + G ++++T +          V LGD  V + +    + + +V+   
Sbjct: 23  ALRTQVRHAPAMRRLGRVAAVTGLIIESEG--PNVGLGDICVIRSERDAFEVMAEVVGFR 80

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLS 125
            + V + P+G    +  G  V    R  I  S     GRV++ALG+P DG   +    + 
Sbjct: 81  GERVLLMPLGETTGLHAGCSVSAGDRPPIPVSGAQLLGRVLDALGRPFDGAGPVPTRRVD 140

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + S+ P  + RQR+ +   TG+R +D FTPL  GQR+G+FAGSG+GKSTLL M AR  
Sbjct: 141 A-VHSRPPHPLRRQRIREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTLLGMIARGS 199

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D V+I LVGERGREVREF+ +D   + L +SVVVVATSD    LR  A  TA  IAE 
Sbjct: 200 AADVVVIGLVGERGREVREFLEKDLGAEGLARSVVVVATSDSPAPLRLRAAFTATAIAES 259

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           +  +G NVLL++DS+TRFA + REI    GE P  RGY  SVF+ LPRLLER G  E   
Sbjct: 260 YRDQGKNVLLLMDSVTRFAMAQREIGLAIGEPPATRGYTPSVFALLPRLLERAGAGET-- 317

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA+ +VLV+GD+ N+PIAD+VR ILDGH+VL+R+LA    YP +D L SVSRL    
Sbjct: 318 GAITALYTVLVEGDDMNEPIADAVRGILDGHLVLSRALAHANHYPAIDVLESVSRLTRDI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD- 423
            SA E +  +    L+  ++   D+  IG Y+ G    LD+AV     +  FL+Q   + 
Sbjct: 378 CSATEVESAARARELLAIYKRNEDLITIGAYQKGASAALDRAVTLHEPLKQFLRQRVDEI 437

Query: 424 LSSEDVFQEITKKL 437
           ++  DVF  + + +
Sbjct: 438 VARADVFNRLAEVM 451


>gi|257462634|ref|ZP_05627044.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D12]
 gi|317060281|ref|ZP_07924766.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D12]
 gi|313685957|gb|EFS22792.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D12]
          Length = 501

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 108/423 (25%), Positives = 183/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E + +  E+Y K+L V   G +  +      +  LS  V   + +         +G  + 
Sbjct: 10  EIIKKEIENYKKSLDVKTSGTVLEVGDGIARIYGLS-SVMSNELLEFPNG---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G    I  GD V   GR  + P      GRV+NALG+ IDG   +    
Sbjct: 66  LEEHNVGAVILGNASLIKEGDEVKATGRVVLVPSGEGMLGRVVNALGEAIDGKGEIRPSK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K    ++RQ V +  +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 126 Y-MPVERKASGIISRQPVVEPLQTGLKSIDGMVPIGRGQRELIIGDRQTGKTAIALDAII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +  K I   +G++   V +  +          +++V AT+ E+  L+ +AP + V 
Sbjct: 185 NQKGNGVKCIYVAIGQKRSTVAQIFQKLENAGAMEYTIIVAATASEAAPLQYLAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYNE---LLTFAQFGSDLDKATKAQLDRGNRIMEILK 421

Query: 419 QSP 421
           Q+ 
Sbjct: 422 QAQ 424


>gi|325981214|ref|YP_004293616.1| ATP synthase F1, alpha subunit [Nitrosomonas sp. AL212]
 gi|325530733|gb|ADZ25454.1| ATP synthase F1, alpha subunit [Nitrosomonas sp. AL212]
          Length = 513

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G I S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKKRIEGLADTAEIRTQGTIVSVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVIMGAYEHIREGDTVKCTGRILEVPVGEGLLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P  + RQ V++  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPVTAA-RSEPIEKIAPGVIWRQSVDQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   VG++   +   +           ++VV AT+ ES  ++
Sbjct: 176 TAVAIDAILNQKGQDMLCIYVAVGQKASSIANVVRKLEEHGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  KG + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYSGCTMGEYFRDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSAAYVEKATNGAVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +  +  + +KQ  
Sbjct: 413 LDEATRKQLERGKMATELMKQPQ 435


>gi|323705920|ref|ZP_08117491.1| ATP synthase F1, alpha subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534718|gb|EGB24498.1| ATP synthase F1, alpha subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 506

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 106/439 (24%), Positives = 179/439 (40%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + ED  KN          G + +       +  L + +  G+ V  +   
Sbjct: 1   MDIKPEEITSILEDKIKNFDFAIKTEDVGRVITAGDGIAKIYGLDEAI-YGEMVEFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G V+ +  D V +  +G  E I  G +V   G+   +       GRV+N LG+P+D
Sbjct: 57  SGVYGMVMNLEEDSVGVIVLGDPESIKEGTIVKRTGKVVEVPVGYGLLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D +  +    PP + R+ V+   +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPV-KSDGTRPVEYPAPPIIKRKSVDTPLQTGILAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +  D     I   +G++   +   +           + VV +T+ +S  L+
Sbjct: 176 TAIAVDTIINQKDKGVYCIYVAIGQKASTIAGLVNTLEKFGAMSYTTVVASTASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     +AE+F     +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMAEHFMYDKKDVLIVYDDLSKHAVAYRTISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSAKLSDDMGGGSITALPIIETLAGDISAYIPTNVISITDGQIYLESELFYSGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   +   + ++ E     +   +   +D      + Q
Sbjct: 356 AINVGLSVSRVGGAAQKKAMKKVSGRMRLELSQYRELE---VFAQFGSDLDKSTLDLLRQ 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I +  KQS     S +
Sbjct: 413 GERIVEITKQSRYQPISME 431


>gi|115531899|ref|YP_784055.1| ATP synthase CF1 alpha subunit [Pelargonium x hortorum]
 gi|122164295|sp|Q06FX6|ATPA_PELHO RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|112382053|gb|ABI17246.1| ATP synthase CF1 alpha subunit [Pelargonium x hortorum]
          Length = 507

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 185/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L++ V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIYGLNE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGAGLMIQEGSSVKATGRIVQIPVSEAYLGRVINALAKPIDGRGGISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +        ++VV  T+     L+ +AP T   +A
Sbjct: 188 QGKNVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---AFAQFATDLDKTTQSQLARGRRLRELLKQS 424

Query: 421 PSDL 424
            +D 
Sbjct: 425 QADP 428


>gi|156598089|gb|ABU85310.1| ATP synthase CF1 alpha subunit [Cycas micronesica]
          Length = 507

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  SIIRKQIKQYNQEVEVVNIGIVLQVGDGIARIHGLDE-VMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESNNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYSGRVVNALAQPIDGRGKITASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 -SRSIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF     + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYNEQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDRATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|294501862|ref|YP_003565562.1| ATP synthase F1 subunit alpha [Bacillus megaterium QM B1551]
 gi|114510|sp|P17674|ATPA_BACMQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|142559|gb|AAA82524.1| ATP synthase alpha subunit [Bacillus megaterium]
 gi|294351799|gb|ADE72128.1| ATP synthase F1, alpha subunit [Bacillus megaterium QM B1551]
          Length = 502

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIKVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N+LG+P+DG   + +  
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMEVPVGEQLIGRVVNSLGQPVDGLGPV-ETT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I    P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEGAAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDQDMVCIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVIYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDQATQAKLNRGARTVEILK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|74318817|ref|YP_316557.1| F0F1 ATP synthase subunit alpha [Thiobacillus denitrificans ATCC
           25259]
 gi|124007224|sp|Q3SF64|ATPA_THIDA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|74058312|gb|AAZ98752.1| F-type H+-transporting ATP synthase, alpha subunit [Thiobacillus
           denitrificans ATCC 25259]
          Length = 513

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 192/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL     +   G I S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKAKIENLGASSELRTQGTIVSVTDGIVRIHGLSD-VMSGEMIEMPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD+    GR   +       GRV+N+LG+PID
Sbjct: 58  -NTFGVALNLERDSVGAVILGDYEHIKEGDVAKCTGRILEVPVGRGLLGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D SM I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-AADSSMPIERIAPGVIERKSVDQPVQTGLKSIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   VG++   V   +         + ++VV AT+ ++  ++
Sbjct: 176 TAVAIDAIINQKGTGVKCIYVAVGQKASSVANVVRKLEEHGAMEHTIVVAATASDAAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF   G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFRDIGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKLTGGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGLSVSRVGGAAQTKVVKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ+     S
Sbjct: 413 LDEATRKQLERGRRVTELMKQAQYSPMS 440


>gi|332529015|ref|ZP_08404981.1| F0F1 ATP synthase subunit alpha [Hylemonella gracilis ATCC 19624]
 gi|332041565|gb|EGI77925.1| F0F1 ATP synthase subunit alpha [Hylemonella gracilis ATCC 19624]
          Length = 517

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 188/450 (41%), Gaps = 29/450 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     +  LS+ V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIQGLSASADIRNQGTVVSVTDGIVRIHGLSE-VMQGEMLEFPAGK 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
                 G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPTYGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELVGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPMQTGLKSIDAMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        I   +G++   V+  +           ++VV AT+ ES  
Sbjct: 179 GKTAVAIDAIINQKGQNMTCIYVAIGQKASSVKNVVRALEQAGAMAYTIVVAATASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G + L++ D +++ A + R+++      P    +P  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +D    K + +   + + LKQ+     S
Sbjct: 416 SDLDASTKKQLDRGARVTELLKQAQYSPLS 445


>gi|543872|sp|Q05372|ATPA_SYNP1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|480492|pir||S36965 H+-transporting two-sector ATPase (EC 3.6.3.14) alpha chain -
           Synechococcus sp
 gi|49219|emb|CAA49875.1| ATP synthase (alpha) [Synechococcus sp.]
          Length = 503

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 176/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      V  L + V   + V  +      +G  + 
Sbjct: 11  SIIRQQIEQYEQSINVDNVGTVLQVGDGIARVYGLDK-VMASELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+   +       GRV++AL +PIDG   +    
Sbjct: 67  LEEDNVGVVLMGAGLGIEEGSTVRATGKIASVPVGEAVIGRVVDALMRPIDGKGEIHATA 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-LESPAPGIVQRKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           ++VV A + +   L+ +AP T  +
Sbjct: 186 NQKGQDVICVYVAIGQKASSVAQVVNVLRERGALDYTIVVAANASDPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYQGKHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NDALGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGLRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F+E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFDELQ---AFAQFASDLDKATQNQLARGQRLREILK 422

Query: 419 QSP 421
           Q  
Sbjct: 423 QPQ 425


>gi|323649907|ref|YP_004237280.1| ATP synthase F1 subunit 1 [Ricinus communis]
 gi|322394287|gb|ADW96044.1| ATP synthase F1 subunit 1 [Ricinus communis]
          Length = 509

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 175/439 (39%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRITNYYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVPKQPQ 435


>gi|312370923|gb|EFR19222.1| hypothetical protein AND_22861 [Anopheles darlingi]
          Length = 551

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   + K      +  K P  + R  
Sbjct: 124 KEGDIVKRTGAIVDVPVGDEILGRVVDALGNAIDGKGEI-KTKQRFRVGIKAPGIIPRVS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDGQDESKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLTDSGAMNYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPALGAGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|170032139|ref|XP_001843940.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167871889|gb|EDS35272.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 551

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 68  ETGRVLSIGDGIARVYGL-KNIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +  G     +  K P  + R  
Sbjct: 124 KEGDIVKRTGAIVDVPVGDEILGRVVDALGNAIDGKGEIKTG-QRFRVGIKAPGIIPRVS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 183 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDGQDESKKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNPTLGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 423 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 473


>gi|332297612|ref|YP_004439534.1| ATPase, FliI/YscN family [Treponema brennaborense DSM 12168]
 gi|332180715|gb|AEE16403.1| ATPase, FliI/YscN family [Treponema brennaborense DSM 12168]
          Length = 452

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 171/431 (39%), Positives = 247/431 (57%), Gaps = 12/431 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLD 68
           +A   +   ++  G +S++  +            +G+    +    D     +V+ +N  
Sbjct: 9   IASVKNTETILYTGNVSAVRGMLIESHG--PRSVIGEMCFIKLMRGDMQIAAEVVGLNGT 66

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +   G  + I +G  V   G   R++      GRVI+A+GKP DG   L  G L   
Sbjct: 67  TVQLMAYGETKGIEIGCEVVATGHVLRVAVGNGLLGRVIDAVGKPYDGKGELASG-LYYP 125

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
            ++  P  + R+ V +   TG+R ID    +  GQR+G+FAGSG+GKSTLLSM AR+   
Sbjct: 126 ALASPPAPLERRPVSQRMVTGVRAIDAMLAVAKGQRLGIFAGSGVGKSTLLSMIARNTKA 185

Query: 188 DKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+LVGERGREV +FI  D   + LK+SVVVVATSD+  I R  A  TA  +AEYF 
Sbjct: 186 DVNVIALVGERGREVVDFIDRDLGEEGLKRSVVVVATSDQPSIARLRAAYTATAVAEYFR 245

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +V+L+ DS+TRFAH+ REI   SGE P  RGYP SVF  LP+LLER G ++   G+
Sbjct: 246 DQGKDVMLMFDSVTRFAHAQREIGLASGEPPAQRGYPPSVFDLLPKLLERSGTNQT--GS 303

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VLVDGD+ ++PIAD VR  LDGHIVLNR LA+   +P +D LAS+SRL+ +   
Sbjct: 304 ITAFYTVLVDGDDMDEPIADKVRGTLDGHIVLNRKLAQAAHFPAIDVLASISRLSKRVSG 363

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              ++ V+++  L+  + E  D+  +G Y+ G +  +DKA+   P I  FL Q   + + 
Sbjct: 364 PATQQAVTTVRRLMASYAENEDMITVGAYQKGSNAAIDKAIDVHPDIEAFLMQDEYEPA- 422

Query: 427 EDVFQEITKKL 437
               +   +KL
Sbjct: 423 --PLESTLEKL 431


>gi|329890941|ref|ZP_08269284.1| ATP synthase F1, alpha subunit [Brevundimonas diminuta ATCC 11568]
 gi|328846242|gb|EGF95806.1| ATP synthase F1, alpha subunit [Brevundimonas diminuta ATCC 11568]
          Length = 510

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 177/440 (40%), Gaps = 26/440 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +    N      V   G + S+      +  L   V  G+ V      
Sbjct: 1   MDIRAAEISAILKSQITNFGVEADVSDVGQVLSVGDGIARIHGL-DNVQAGEMVEFTKAG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V     G    I+ GD V   G    +       GRV+N LG+PID
Sbjct: 60  --VKGMALNLERDNVGAVIFGADAAIAEGDDVRRLGEIVDVPVGKGLLGRVVNPLGEPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +     +GK
Sbjct: 118 GKGPIQFTE-RRRVDVKAPGIIPRKSVHEPMQTGMKAIDTLIPVGRGQRELIIGDRQVGK 176

Query: 175 STLLSMFARSDCFD----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +      +                I   +G++   V + ++        + ++VV AT
Sbjct: 177 TAVAIDTILNQKAVNKSDDESAKLYCIYVAIGQKRSTVAQIVKTLEESGALEYTIVVAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E   L+ +AP     + EYF   G + L+I D +++ A + R+++      P    YP
Sbjct: 237 ASEPAPLQFLAPFAGTAMGEYFRDNGMHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 296

Query: 284 TSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     ++ G+   TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERSAKLNEDYGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLESD 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D+
Sbjct: 357 LFYQGIRPAVNVGISVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAKFGSDLDV 413

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              + + +   + + LKQ  
Sbjct: 414 STQRLLARGARLTELLKQPQ 433


>gi|325921919|ref|ZP_08183730.1| Type III secretion system ATPase HrcN protein [Xanthomonas gardneri
           ATCC 19865]
 gi|325547621|gb|EGD18664.1| Type III secretion system ATPase HrcN protein [Xanthomonas gardneri
           ATCC 19865]
          Length = 438

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 167/416 (40%), Positives = 241/416 (57%), Gaps = 9/416 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIG 78
            + G +  +      V  +   V LG+    + ++   L   +V+  +  +  + P G  
Sbjct: 19  RRYGKVVEVIGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRHLALLAPFGEL 76

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR   +       GRV++ LG+P DG   +  GD  ++I ++ P  M 
Sbjct: 77  VGLSRETRVIGSGRPLAVPVGEALLGRVLDGLGEPADGQGPV-AGDGWVQIQAQAPDPMR 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D  +I L+GE
Sbjct: 136 RRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGE 195

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  +G  VLL++
Sbjct: 196 RGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDQGMRVLLMM 255

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+ITA  +VL +
Sbjct: 256 DSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGET--GSITAFYTVLAE 313

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            D  +DPIA+ VR ILDGH++L+R +A + +YP +D L S+SR+  +  SA++++    L
Sbjct: 314 DDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLSRVMSQIVSAEQRQYAGQL 373

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             L+ ++ E   +  +G YR G D + D+A+ ++  I DFL QS   LS  D   E
Sbjct: 374 RRLLAKYNEVETLLQVGEYRQGSDAVADEAIARIDAIRDFLSQSTDQLSDYDATLE 429


>gi|227524279|ref|ZP_03954328.1| F0F1 ATP synthase subunit alpha [Lactobacillus hilgardii ATCC 8290]
 gi|227088510|gb|EEI23822.1| F0F1 ATP synthase subunit alpha [Lactobacillus hilgardii ATCC 8290]
          Length = 522

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y   L V + G ++ +         L   +  G+ +          G V  
Sbjct: 10  ALIKQQLQGYQNELDVKETGIVTYVGDGIARAHGLENALS-GELLDF---GHGVFGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N+LG+PIDG   + K D
Sbjct: 66  LEANDVGIMVLGDDTNIREGDSVKRTGRIMEVPVGDDMIGRVVNSLGQPIDGKGPI-KAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+++      
Sbjct: 125 DHKAIEHKAPGVMDRKSVFEPLQTGIKSIDSLIPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   VR  +        +  + V+ A   E   L  +AP    T
Sbjct: 185 NQKGQNMKCIYVAIGQKESTVRASVSTLEKFGAMDYTTVISAGPSEPASLLYIAPYAGAT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL++ D +++ A++ RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMHKGQHVLIVYDDLSKQANAYRELSLILRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+      G  P VD   SVS
Sbjct: 305 SDKLGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAVDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVAGTLRLDLASYHELESFAQFG---SDLDEATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|309362199|emb|CAP28495.2| hypothetical protein CBG_08717 [Caenorhabditis briggsae AF16]
          Length = 579

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +++D V +   G  + I
Sbjct: 96  ETGKVLSIGDGIARVYGL-KNIQAEEMVEF---DSGIKGMAMNLDVDNVGVVVFGNDKVI 151

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +     S  +  K P  + R  
Sbjct: 152 REGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPINSAKRSR-VEVKAPGIIPRLS 210

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TG++ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 211 VREPMLTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFC 270

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + ++          ++VV AT+ ++  L+ +AP +   + E+F   G
Sbjct: 271 IYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEFFRDNG 330

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 331 KHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNTLGGGSL 390

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 391 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 450

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 451 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 501


>gi|15677766|ref|NP_274930.1| F0F1 ATP synthase subunit alpha [Neisseria meningitidis MC58]
 gi|81784175|sp|Q9JXQ0|ATPA_NEIMB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|7227194|gb|AAF42265.1| ATP synthase F1, alpha subunit [Neisseria meningitidis MC58]
 gi|316985558|gb|EFV64505.1| ATP synthase F1, alpha subunit [Neisseria meningitidis H44/76]
 gi|325139589|gb|EGC62129.1| ATP synthase F1, alpha subunit [Neisseria meningitidis CU385]
 gi|325200987|gb|ADY96442.1| ATP synthase F1, alpha subunit [Neisseria meningitidis H44/76]
          Length = 515

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTCGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|159483185|ref|XP_001699641.1| mitochondrial F1F0 ATP synthase, alpha subunit [Chlamydomonas
           reinhardtii]
 gi|1495363|emb|CAA63864.1| H(+)-transporting ATP synthase [Chlamydomonas reinhardtii]
 gi|158281583|gb|EDP07337.1| mitochondrial F1F0 ATP synthase, alpha subunit [Chlamydomonas
           reinhardtii]
          Length = 569

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 100/435 (22%), Positives = 182/435 (41%), Gaps = 23/435 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +K +  + +  + Y    V+  G + S+      V  L + V  G+ V     +S   G 
Sbjct: 71  EKLIPAVKEWEKQYQPP-VIHLGRVLSVGDGIARVYGL-KSVQAGELVCF---DSGVKGM 125

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V +   G    I  GDLV+  G+   +       GRV++ALG+PIDG   L 
Sbjct: 126 ALNLQADHVGVVVFGNDSLIHQGDLVYRTGQIVNVPVGPGTLGRVVDALGQPIDGKGPLT 185

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG------- 173
               S+ +  K P  + RQ V +   TG++ +D   P+  GQR  +      G       
Sbjct: 186 NVRSSL-VEIKAPGIIARQSVREPLYTGVKAVDALVPIGRGQRELIIGDRQTGKTAVALD 244

Query: 174 ---KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPI 229
                  L+           +   +G++   V   ++ +      K +++V AT+ ++  
Sbjct: 245 CILHQNYLNGLTNKKNRVYCVYVAIGQKRSTVANLVKLFAQTGALKYTIIVSATASDAAP 304

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +   +AEYF   G + ++I D +++ + + R+++      P    +P  VF  
Sbjct: 305 LQFLAPYSGCAMAEYFRDTGKHAVIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYL 364

Query: 290 LPRLLERIGPSE--KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER          G++TA   +     + +  IA +V SI DG I L   L  +G 
Sbjct: 365 HSRLLERAAKLSAAMGGGSLTAFPVIETQAGDVSAYIATNVISITDGQIFLETELFYKGI 424

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      +
Sbjct: 425 RPALNVGLSVSRVGSAAQFPGMKQVAGTLKLELAQYRE---VAAFAQFGSDLDAATQYVL 481

Query: 408 HQVPIIYDFLKQSPS 422
            +   + + LKQ   
Sbjct: 482 ERGARLTEVLKQKQF 496


>gi|299136420|ref|ZP_07029603.1| ATP synthase F1, alpha subunit [Acidobacterium sp. MP5ACTX8]
 gi|298600935|gb|EFI57090.1| ATP synthase F1, alpha subunit [Acidobacterium sp. MP5ACTX8]
          Length = 515

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  E+Y + + V + G I ++      V  L + V  G+ +         +G  + 
Sbjct: 11  ELLRQQIENYEQRVQVDEVGTIITLGDGIARVHGLDK-VMAGELIEFP---HGIMGLAMN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V    +G   E+  GD V   G+   +       GRV+NALG+PID    +    
Sbjct: 67  LDEDQVGTVVLGDYSELKEGDEVKRTGKIMSVPVGEALIGRVVNALGQPIDDKGPIN-TP 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ +    P  + RQ V +   TGI+ ID   P+  GQR  +      GK+++      
Sbjct: 126 HTLPVERLAPGVIARQSVTEPMATGIKAIDTMIPIGRGQRELLIGDRQTGKTSVALDTII 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   V   ++          ++VV AT+ E   ++ +AP  A  
Sbjct: 186 NSAKNDLICIYCAIGQKRSSVAAVVQTLEEYGAMAYTIVVAATASEPAPMQYLAPFAATA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + L+I D +++ A S REI+      P    YP  VF    RLLER    
Sbjct: 246 MGEYFRDNGKHALIIYDDLSKHAASYREISLLLRRPPGREAYPGDVFYLHSRLLERSSKM 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +     + +  I  +V SI DG I     L   G  P V+   SVS
Sbjct: 306 SKELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFFETDLFNSGVRPAVNVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S+L   + ++ E         +   +D +    +++   + + LK
Sbjct: 366 RVGFAAAIKATKQVGSTLKLDLAQYREL---AAFAQFGSDLDKVTQNQLNRGARLTELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|295707210|ref|YP_003600285.1| ATP synthase F1 subunit alpha [Bacillus megaterium DSM 319]
 gi|294804869|gb|ADF41935.1| ATP synthase F1, alpha subunit [Bacillus megaterium DSM 319]
          Length = 502

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIKVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N+LG+P+DG   + +  
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMEVPVGEQLIGRVVNSLGQPVDGLGPV-ETT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I    P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEGAAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDQDMVCIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVIYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDQATQAKLNRGARTVEILK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|317052370|ref|YP_004113486.1| ATPase, FliI/YscN family [Desulfurispirillum indicum S5]
 gi|316947454|gb|ADU66930.1| ATPase, FliI/YscN family [Desulfurispirillum indicum S5]
          Length = 439

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 156/441 (35%), Positives = 238/441 (53%), Gaps = 11/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--- 57
           M  ++E L    +      V   G ++ I  +   +        +GD  +    N     
Sbjct: 1   MPLDVEKLKHRIDH--TRTVKLIGKVTKIIGLL--IESRGPASSIGDLCLIHPINPREPL 56

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
              +V+    D++ + P+G    I  G  V      F +       GRV+N LG PID  
Sbjct: 57  VTAEVVGFRDDVILLMPLGDLAGIGPGSRVEAMKEVFMVPVGDALVGRVLNGLGMPIDEQ 116

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
               +      + +  P    R+R++    TG+R ID       GQR+G+FAGSG+GKST
Sbjct: 117 PE-PECKRLYPVQAAPPNPFTRKRIDTPIGTGVRAIDGLLTWGKGQRVGIFAGSGVGKST 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAP 235
           LL M A++   D  +I+L+GERGREVREFI  D   D L +SV+VVATSD+  ++R+   
Sbjct: 176 LLGMIAKNSQADINVIALIGERGREVREFIERDLGPDGLARSVIVVATSDQPALVRRQGA 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A  IAEYF  +G NV+ ++DSITRF  + REI    GE P  +GY  SVF+ LP+L+E
Sbjct: 236 YVATAIAEYFRDQGKNVMFMMDSITRFCMAQREIGLAVGEPPTTKGYTPSVFALLPKLME 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G     +G+I+A+ +VLVDGD+  +P+AD+ RSILDGHI+L+R LA    +P +D L 
Sbjct: 296 RTGTGTG-EGSISALYTVLVDGDDITEPVADASRSILDGHIMLSRKLASRNHFPAIDVLG 354

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S SR+  +  S + ++L + L +L+  + +  D+  IG Y  G +  +D+AV ++  I  
Sbjct: 355 SASRVFGEITSGEHQELAAKLRNLMAVYGDAEDLINIGAYSKGTNKEIDRAVSRMGAINS 414

Query: 416 FLKQSPSDLSSEDVFQEITKK 436
           FL+Q+ ++         + K+
Sbjct: 415 FLRQAVNESEDFGNICVLMKQ 435


>gi|261419422|ref|YP_003253104.1| flagellum-specific ATP synthase [Geobacillus sp. Y412MC61]
 gi|319766237|ref|YP_004131738.1| ATPase, FliI/YscN family [Geobacillus sp. Y412MC52]
 gi|261375879|gb|ACX78622.1| flagellar protein export ATPase FliI [Geobacillus sp. Y412MC61]
 gi|317111103|gb|ADU93595.1| ATPase, FliI/YscN family [Geobacillus sp. Y412MC52]
          Length = 422

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 155/424 (36%), Positives = 233/424 (54%), Gaps = 10/424 (2%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVG 76
           +  + G +S +  +            +GD      ++       +V+  +   V + P  
Sbjct: 1   MYKRFGKVSRVIGLMM--ESKGPKSSIGDLCYIHEQSGCRKIPAEVVGFHEQHVLLMPFS 58

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               I+ G LV   GR   +       G V++ LG+P+DG   L  G   + +    P  
Sbjct: 59  ATTHIAPGCLVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-PLPPGLKPVSVERDPPNP 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  + +  + GIRVID    +  GQR+G+FAGSG+GKSTL+ M AR    D  +I+L+
Sbjct: 118 LVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLMGMIARHTSADVNVIALI 177

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+  D   D L +SVVVVATSD+  ++R     TA  IAEYF  +G +V+L
Sbjct: 178 GERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYTATAIAEYFRDQGADVML 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +    G ITA  +VL
Sbjct: 238 MMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNAS--GTITAFYTVL 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SVSR+     SA+ ++  +
Sbjct: 296 VDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSVSRVMPHMISAEHREAAN 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
               L+  + ++ D+  IG Y+ G    +D+A+   P +  F +Q+  + ++  +    +
Sbjct: 356 RFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFCRQNIDEKTTRAESIDAL 415

Query: 434 TKKL 437
            + L
Sbjct: 416 LRLL 419


>gi|197132400|gb|ACH47718.1| ATP synthase CF1 alpha subunit [Pelargonium cotyledonis]
          Length = 507

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y+  + +V  G +  +      +  L++ V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNIEVKIVNTGTVLQVGDGIARIYGLNE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGAGLMIQEGSSVKATGRIVQIPVSEAYLGRVINALAKPIDGRGGISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +        ++VV  T+     L+ +AP T   +A
Sbjct: 188 QGKNVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFTELE---AFAQFATDLDKTTQNQLARGRRLRELLKQS 424

Query: 421 PSDL 424
            SD 
Sbjct: 425 QSDP 428


>gi|50058589|gb|AAT69047.1| F1-ATPase alpha subunit [Evolvulus glomeratus]
          Length = 428

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRAEEESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER          G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|55976884|gb|AAV68291.1| F1-ATPase alpha subunit [Pilostyles thurberi]
          Length = 419

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTTIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDGLGLPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|319778923|ref|YP_004129836.1| ATP synthase alpha chain [Taylorella equigenitalis MCE9]
 gi|317108947|gb|ADU91693.1| ATP synthase alpha chain [Taylorella equigenitalis MCE9]
          Length = 513

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISDLLQSRIQGLNASTDVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    IS GD V   GR   +       GRV+N LG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGNYTGISEGDQVKTTGRILEVPVGPELLGRVVNTLGMPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  ++RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AQLTDVIEKVAPGVIDRQSVSQPLQTGIKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K I   VG++   V   +           ++VV AT+ ES  ++
Sbjct: 176 TAVAVDAILNQKGTGVKCIYVAVGQKAATVNNVVRTLEEHGAMEYTIVVSATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L+I D +T+ A + R+++      P    YP  +F    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNTDYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGVSVSRVGGSAQTKVVKKLSGGIRTDLAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDEATRRQLERGKRVVELLKQPQYQP 438


>gi|302670721|ref|YP_003830681.1| flagellar protein export ATPase FliI [Butyrivibrio proteoclasticus
           B316]
 gi|302395194|gb|ADL34099.1| flagellar protein export ATPase FliI [Butyrivibrio proteoclasticus
           B316]
          Length = 452

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 164/447 (36%), Positives = 247/447 (55%), Gaps = 25/447 (5%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH-----------QGKNS 56
           L++  +  +       G + ++     T+        LGD  +              K  
Sbjct: 8   LSKYKKMQNAPFYRMSGKVVNVIG--LTIESAGPDAKLGDICLIYPKKKDNETMSDSKGR 65

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
             + +V+    + V + P      I  G +V +     R++      G+ ++ LG+ IDG
Sbjct: 66  PAMAEVVGFKDNHVQLMPYENTSGIGNGSIVENTDSPLRVNVGEGLLGQTLDGLGR-IDG 124

Query: 116 ----DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
                  + +  ++  + ++ P  M R  + +    G++ +D    +  GQRIG+FAGSG
Sbjct: 125 TSYGKGVMLEDGVAYSVENQPPDPMTRDPISEVLSLGVKAVDGLLTVGKGQRIGIFAGSG 184

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPIL 230
           +GKSTLL MFAR+   D  +I+L+GERGREVREFI  D   + +K+S+VV ATSD+  + 
Sbjct: 185 VGKSTLLGMFARNTQADINVIALIGERGREVREFIERDLGEEGMKRSIVVCATSDKPALE 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R  A  TA +IAEYF  KG +VLL++DS+TRF+ + REI   SGE PV+RGYP SV++E+
Sbjct: 245 RLKAAKTATSIAEYFRDKGKDVLLMMDSLTRFSMAQREIGLASGEPPVSRGYPPSVYAEM 304

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P+LLER G S K  G+IT + +VLVDGD+ N+PI D+ R ILDGHIVLNR LA++  YP 
Sbjct: 305 PKLLERAGRSRK--GSITGLYTVLVDGDDMNEPITDTARGILDGHIVLNRKLAQKNHYPA 362

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D LAS+SR        + KK    L +++  + +  D+  IG YR G +  +D AV ++
Sbjct: 363 IDVLASISRCMSAIADPEHKKAAGKLKNVLATYNDAEDLINIGAYRSGANKNIDYAVSKI 422

Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +  FL Q   +  S   F+EI   L
Sbjct: 423 EQVNAFLTQETDEKFS---FEEIRDML 446


>gi|225465149|ref|XP_002277424.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 507

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 184/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V   + V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMASELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVDVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDIILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A +  +++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRKRHTLIIYDDPSKQAQAYCQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNVGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLVRGQRLRELLKQS 424

Query: 421 PSDLSSED 428
            S   + +
Sbjct: 425 QSSPLTVE 432


>gi|167768336|ref|ZP_02440389.1| hypothetical protein CLOSS21_02892 [Clostridium sp. SS2/1]
 gi|317497736|ref|ZP_07956050.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709860|gb|EDS20439.1| hypothetical protein CLOSS21_02892 [Clostridium sp. SS2/1]
 gi|291560309|emb|CBL39109.1| ATP synthase F1 subcomplex alpha subunit [butyrate-producing
           bacterium SSC/2]
 gi|316894986|gb|EFV17154.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 502

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 97/430 (22%), Positives = 177/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + YS  L     G +  +      +  L +    G+ +   G   +  G V+ 
Sbjct: 10  SVIKEQIKQYSTKLETSDIGTVIQVADGIARIHGLEK-AMQGELLEFPG---EVYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I+ GD+V   GR   +       GRV+N+LG+PID    + + D
Sbjct: 66  LEEDNVGAVLLGDRKNINEGDIVKTTGRVVEVPVGDQLTGRVVNSLGQPIDNKGPI-ETD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYRPIERVASGVISRKSVDTPIQTGIKAIDAMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++       +  + +V +T+ E   L+ +AP     
Sbjct: 185 NQKGQGVHCIYVAIGQKASTVANIVKTLEEFGAMDYTTIVASTASELAPLQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +  +G++VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEEWMERGEDVLVVYDDLSKHATAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   +   G  P ++   SVS
Sbjct: 305 SDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNAGFRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   +   + ++ E   +     +   +D    + + Q   I + LK
Sbjct: 365 RVGGSAQIKAMKKIAGPIRTDLAQYRE---LAAFAQFGSELDDDTKERLDQGERIREILK 421

Query: 419 QSPSDLSSED 428
           Q        +
Sbjct: 422 QPQYQPLPVE 431


>gi|152980082|ref|YP_001355319.1| F-type H+-transporting ATPase alpha chain [Janthinobacterium sp.
           Marseille]
 gi|166201668|sp|A6T472|ATPA_JANMA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151280159|gb|ABR88569.1| F-type H+-transporting ATPase alpha chain [Janthinobacterium sp.
           Marseille]
          Length = 511

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 190/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLGDTAEIRNQGTVISVSDGICRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR    P     CGRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPIGPELCGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-TKLTTPIEKIAPGVIARQSVDQPMQTGIKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   ++  +           ++VV AT+ ES  ++
Sbjct: 176 TAVAIDAIINQKGQGVTCIYVAIGQKASSIKNIVRALEQHGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +   + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 FVSAYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETSLFNSGVRPAINAGISVSRVGGAAQTKVIKGLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + LKQ+     S
Sbjct: 413 LDASTRKQLDRGARVTELLKQAQYAPLS 440


>gi|309322265|ref|YP_003934343.1| ATP synthase CF1 alpha subunit [Monsonia speciosa]
 gi|197132396|gb|ACH47716.1| ATP synthase CF1 alpha subunit [Monsonia speciosa]
 gi|300069358|gb|ADJ66478.1| ATP synthase CF1 alpha subunit [Monsonia speciosa]
          Length = 502

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 188/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y++ + +V  G +  +      V  L++ V  G+ V  +      +G  + + 
Sbjct: 13  IRERIKQYNREVKIVNMGTVLRVGDGIARVYGLNE-VMAGELVEFEEG---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GR++NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGFMIQEGSSVKATGRIAQIPVSEAYLGRIVNALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + + ++        ++VV  T+     L+ +AP T   +A
Sbjct: 188 RGKDVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+I+      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRQRHTLVIYDDLSKQAQAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 SLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLDLAQFTELE---AFAQFATDLDKTTQNQLARGRRLREVLKQS 424

Query: 421 PSDLSSED 428
            S+    +
Sbjct: 425 QSEPLEVE 432


>gi|289548968|ref|YP_003473956.1| ATP synthase F1 subunit alpha [Thermocrinis albus DSM 14484]
 gi|289182585|gb|ADC89829.1| ATP synthase F1, alpha subunit [Thermocrinis albus DSM 14484]
          Length = 503

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 107/427 (25%), Positives = 177/427 (41%), Gaps = 15/427 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++ L+ L +  +D  + + ++  G +  +         L   V   + V  +G     LG
Sbjct: 7   EEALQLLREQIKDLEETVKMEEVGVVYYVGDGVARAYGL-DNVMANEVVEFEGG---TLG 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSL 119
               +  D V I  +G    I  G LV   GR           GRVI+ LG P+DG   +
Sbjct: 63  LAFNLEEDNVGIIVLGSESGIREGSLVRRTGRILDAPVGEGLIGRVIDPLGNPLDGKGPI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            K +    +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+  
Sbjct: 123 -KYEYRSPVEKIAPGVVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRSTGKTTICI 181

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD-ESPILRKMAPL 236
            ++  + D     I   +G++       IE        +   VV  S  +   L+ +AP 
Sbjct: 182 DTILNQKDTDVYCIYVAIGQKRSTTARIIELLEKHGAMEYTCVVVASATDPASLQYLAPF 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              TI EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 VGCTIGEYFRDNGKHALVIYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++  
Sbjct: 302 AAKLNDELGAGSLTALPIIETKAGDVAAYIPTNVISITDGQIYLEPDLFNKGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  +L   + +F E         +   +D    K +++   + 
Sbjct: 362 LSVSRVGGAAQIKAMKQVAGTLRLDLAQFRELE---AFVQFASELDTATQKIINRGLRLV 418

Query: 415 DFLKQSP 421
           + LKQ P
Sbjct: 419 ELLKQEP 425


>gi|220906912|ref|YP_002482223.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. PCC 7425]
 gi|254807691|sp|B8HPK1|ATPA_CYAP4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219863523|gb|ACL43862.1| ATP synthase F1, alpha subunit [Cyanothece sp. PCC 7425]
          Length = 505

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 183/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y + + V+  G +  +      V  L + V   + +  +      +G  + 
Sbjct: 11  SIIRQQIEQYDQQVKVENVGTVLQVGDGIARVYGLEK-VMASELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G ++  G  V   GR  ++       GRV++AL +PIDG   +   +
Sbjct: 67  LEEDNVGVVLMGEGRDLEEGSTVRSTGRVAQVPVGEGAIGRVVDALVRPIDGKGEIHSTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-LESPAPGIVQRKSVYEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +         + ++VV A + +   L+ +AP T  T
Sbjct: 186 NQKGSGVICVYVAIGQKASTVAQVVNVLRERGALEYTIVVAANASDPAALQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG   L++ D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGKATLVVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SPELGEGSMTALPVVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGLRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F+E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFDELQ---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSP 421
           Q  
Sbjct: 423 QPQ 425


>gi|149390427|ref|YP_001294255.1| ATP synthase CF1 alpha subunit [Illicium oligandrum]
 gi|190358177|sp|A6MMS9|ATPA_ILLOL RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|147917380|gb|ABQ52504.1| ATP synthase CF1 alpha subunit [Illicium oligandrum]
          Length = 507

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + +V  G +  +      +  L + V  G+ V  +      +G      
Sbjct: 13  IRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDE-VMAGELVEFEEG---TIGIAPNSE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV  T+D    L+ +AP T   +A
Sbjct: 188 KGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 RLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|51556908|gb|AAU06224.1| AtpA [Elymus sibiricus]
          Length = 505

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 189/437 (43%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPGIISRRSVYEPMQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +     VI     +G+R   V + + ++  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQNVICVYVAIGQRASSVAQVVTNFQEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++   L   + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKLKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|58268340|ref|XP_571326.1| ATP synthase alpha chain, mitochondrial precursor [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|134113074|ref|XP_774813.1| hypothetical protein CNBF2430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257459|gb|EAL20166.1| hypothetical protein CNBF2430 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227561|gb|AAW44019.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 540

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 104/429 (24%), Positives = 185/429 (43%), Gaps = 22/429 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + +I      V  L + V   + V     +S   G  + +  D V +   G   
Sbjct: 56  VQETGRVLTIGDGIARVYGL-RNVQAEEMVEF---SSGVRGMCLNLEADNVGVTIFGNDR 111

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GD V   G+   +       GRV++ALG PIDG   + K D   +   K P  + R
Sbjct: 112 LIKEGDTVKRTGQIVDVPVGPGLLGRVVDALGNPIDGKGPI-KADGRTKAQLKAPGILPR 170

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----- 188
           + V +  +TG++ +D   P+  GQR  +      GK      T+L+    +D  D     
Sbjct: 171 RSVHEPMQTGLKSVDSLVPIGRGQRELIIGDRQTGKSALAVDTILNQKKWNDGADESKKL 230

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   VG++   V + ++    ++  K +++V AT+ E+  L+ +AP +   + E+F  
Sbjct: 231 YCVYVAVGQKRSTVAQLVKTLEENDAMKYTIIVAATASEAAPLQYLAPFSGCAMGEWFRD 290

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG-- 305
            G + L+I D +++ A + R+++      P    YP  VF    RLLER      + G  
Sbjct: 291 NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNADYGAG 350

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A 
Sbjct: 351 SLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFKGVRPAINVGLSVSRVGSAAQ 410

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   K +  SL   + ++ E   +     +   +D      +++   + + LKQ      
Sbjct: 411 TKLMKSVAGSLKLYLAQYRE---VAAFAQFGSDLDASTRYLLNRGARLTELLKQPQYSPM 467

Query: 426 SEDVFQEIT 434
             +V   + 
Sbjct: 468 PTEVMAPLI 476


>gi|55976876|gb|AAV68287.1| F1-ATPase alpha subunit [Cytinus ruber]
          Length = 419

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSETAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|302925952|ref|XP_003054197.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735138|gb|EEU48484.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 552

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 101/415 (24%), Positives = 177/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 68  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 123

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    I       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 124 VKEGETVKRTGEIVDIPVGPEMLGRVVDALGNPIDGKGPIPTKE-RRRAQLKAPGILPRK 182

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ ID   P+  GQR  +      GK      T+L+    ++  D      
Sbjct: 183 SVNEPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVGLDTILNQKRWNNSNDEKKKLY 242

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T  +I E+F   
Sbjct: 243 CVYVAVGQKRSTVAQLVQTLEENDAMKYSIVVAATASEAAPLQYLAPFTGASIGEWFRDN 302

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 303 GRHSLVIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDKLGGGS 362

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 363 MTALPIIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSSAQL 422

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 423 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLSRGERLTELLKQKQ 474


>gi|149913694|ref|ZP_01902227.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. AzwK-3b]
 gi|149812814|gb|EDM72643.1| F0F1 ATP synthase subunit alpha [Roseobacter sp. AzwK-3b]
          Length = 512

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 185/447 (41%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVHGL-DNVQAGELVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V I   G   EI  GD V         P      GRV++ LG P+D
Sbjct: 59  --VMGMALNLETDNVGIVIFGSDREIGEGDTVKRTKSIVDVPIGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K        SK P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTKNRGIADSKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
                 T+L+  + +D            +   +G++   V + ++       +  S++V 
Sbjct: 176 TAVALDTILNQKSYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEESGAIDYSIIVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AE+F   G + L++ D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEHFRDNGRHALIVYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDNGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|11466375|ref|NP_038378.1| ATP synthase CF1 alpha subunit [Mesostigma viride]
 gi|12585165|sp|Q9MUT2|ATPA_MESVI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|7259518|gb|AAF43819.1|AF166114_31 CF1 alpha subunit of ATP synthase [Mesostigma viride]
          Length = 505

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 97/424 (22%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + VV  G +  +      +  L++    G+ +  +      +G  + 
Sbjct: 11  SVIRKQIEQYNQEVKVVNTGTVLQVGDGIARIYGLAK-AMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G G  I  G  V   G+  +I     + GRV++AL +PIDG   +   +
Sbjct: 67  LESNNVGAVLMGDGFSIQEGSRVKATGKIAQIPIGESYIGRVVDALARPIDGKGDIPSSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESPAPGIISRRSVYEPLQTGLVSVDAMIPIGRGQRELIIGDRQTGKTAVAIDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +     +     +++V   ++    L+ +AP T  T
Sbjct: 186 NQKGQNVICVYVAIGQKASSVAQVVSTLEENGAMAYTIIVAENANAPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F   G + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEFFMYSGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  +     +    I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SNALGEGSMTALPIIETQAGDVAAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGRRLRELLK 422

Query: 419 QSPS 422
           Q+ S
Sbjct: 423 QAQS 426


>gi|218176242|ref|YP_002364499.1| ATP synthase CF1 alpha subunit [Festuca arundinacea]
 gi|215882326|gb|ACJ70756.1| ATP synthase CF1 alpha subunit [Festuca arundinacea]
          Length = 507

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 106/431 (24%), Positives = 186/431 (43%), Gaps = 15/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVKFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGKGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +     VI     +G+R   V + + ++  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQNVICVYVAIGQRASSVAQVVTNFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSPSDLSSED 428
           KQS S+    +
Sbjct: 422 KQSQSNPLPVE 432


>gi|195121302|ref|XP_002005159.1| GI20326 [Drosophila mojavensis]
 gi|193910227|gb|EDW09094.1| GI20326 [Drosophila mojavensis]
          Length = 550

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 182/422 (43%), Gaps = 23/422 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 67  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 122

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 123 KQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 181

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 182 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDGQDESKKLYC 241

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + E+F  KG
Sbjct: 242 IYVAIGQKRSTVAQIVKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDKG 301

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 302 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 361

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 362 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 421

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSS 426
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ     +S 
Sbjct: 422 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSI 478

Query: 427 ED 428
           ED
Sbjct: 479 ED 480


>gi|257042747|gb|ACV33013.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 180/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKXXQIPVSDAYLGRVVNALAQPIDGKXXXSASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|224373742|ref|YP_002608114.1| flagellum-specific ATP synthase [Nautilia profundicola AmH]
 gi|223589927|gb|ACM93663.1| flagellum-specific ATP synthase [Nautilia profundicola AmH]
          Length = 432

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 160/424 (37%), Positives = 237/424 (55%), Gaps = 9/424 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           K L    G +  I       T L+    +GD V     N + LG V  ++ +   + P  
Sbjct: 13  KPLSKPFGIVKKINPTNLIATGLNP--SIGDIVKICSGNHEILGMVTALDENSFVVTPFS 70

Query: 77  IGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E   +GD ++      +I       GRV++    PID    +   +    IM+K    
Sbjct: 71  FLEGFKIGDKIYIDENGMQIPVGEGLLGRVVDPFMNPIDDKGDIFF-ETKYPIMTKPISP 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M R  + + F+T ++ ID       GQ++G+FAGSG+GKSTL+SM  +    D  +I+L+
Sbjct: 130 MKRGVINEVFETKVKAIDGLLTCGKGQKLGIFAGSGVGKSTLMSMIVKGASADIKVIALI 189

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  LG +L  +V++VATSD+S ++RK    +A+ +AEYF  K  +VL +
Sbjct: 190 GERGREIPEFIEHQLGGDLTNTVIIVATSDDSALMRKYGAFSAMAVAEYFKDKNKDVLFL 249

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DSITRFA + REI    GE P ++GYP S    LP+L+ER G  EK+KG+ITA  +VLV
Sbjct: 250 MDSITRFAMAQREIGLAMGEPPTSKGYPPSAIMLLPQLMERAGK-EKDKGSITAFFTVLV 308

Query: 316 DGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           +GD+ + DPIAD  RSILDGH +L+R L + G YPP++ L S SR+ +   + +  +   
Sbjct: 309 EGDDTSADPIADQARSILDGHFILSRELTDSGIYPPINILNSASRVMNNVVTKEHLQKAQ 368

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
               L    +E   +  IG Y+ GVD  LD+A+++   + +FLKQSP++L     F E  
Sbjct: 369 KFKKLYSLLKENEVLIRIGAYQKGVDPELDEAINKKEAMENFLKQSPNELI---PFNETL 425

Query: 435 KKLQ 438
             L 
Sbjct: 426 NLLN 429


>gi|29377095|ref|NP_816249.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis V583]
 gi|227519705|ref|ZP_03949754.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis TX0104]
 gi|227554105|ref|ZP_03984152.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis HH22]
 gi|229545022|ref|ZP_04433747.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis TX1322]
 gi|255971978|ref|ZP_05422564.1| ATP synthase F1 [Enterococcus faecalis T1]
 gi|255975035|ref|ZP_05425621.1| ATP synthase F1 [Enterococcus faecalis T2]
 gi|256616878|ref|ZP_05473724.1| ATP synthase F1 [Enterococcus faecalis ATCC 4200]
 gi|256763248|ref|ZP_05503828.1| ATP synthase F1 [Enterococcus faecalis T3]
 gi|256853921|ref|ZP_05559286.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis T8]
 gi|256957849|ref|ZP_05562020.1| ATP synthase F1 [Enterococcus faecalis DS5]
 gi|256961152|ref|ZP_05565323.1| ATP synthase F1 [Enterococcus faecalis Merz96]
 gi|256963729|ref|ZP_05567900.1| ATP synthase F1 [Enterococcus faecalis HIP11704]
 gi|257079787|ref|ZP_05574148.1| ATP synthase F1 [Enterococcus faecalis JH1]
 gi|257081867|ref|ZP_05576228.1| ATP synthase F1 [Enterococcus faecalis E1Sol]
 gi|257084409|ref|ZP_05578770.1| ATP synthase F1 [Enterococcus faecalis Fly1]
 gi|257087592|ref|ZP_05581953.1| ATP synthase F1 [Enterococcus faecalis D6]
 gi|257090751|ref|ZP_05585112.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis CH188]
 gi|257416799|ref|ZP_05593793.1| ATP synthase F1 [Enterococcus faecalis AR01/DG]
 gi|257420015|ref|ZP_05597009.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis T11]
 gi|257421806|ref|ZP_05598796.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis X98]
 gi|293384098|ref|ZP_06629992.1| ATP synthase F1, alpha subunit [Enterococcus faecalis R712]
 gi|293386913|ref|ZP_06631482.1| ATP synthase F1, alpha subunit [Enterococcus faecalis S613]
 gi|294781390|ref|ZP_06746732.1| ATP synthase F1, alpha subunit [Enterococcus faecalis PC1.1]
 gi|300860756|ref|ZP_07106843.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TUSoD Ef11]
 gi|307270674|ref|ZP_07551965.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX4248]
 gi|307271676|ref|ZP_07552947.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0855]
 gi|307276858|ref|ZP_07557969.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX2134]
 gi|307285544|ref|ZP_07565683.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0860]
 gi|307287565|ref|ZP_07567608.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0109]
 gi|307290376|ref|ZP_07570291.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0411]
 gi|312899984|ref|ZP_07759302.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0470]
 gi|312902381|ref|ZP_07761587.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0635]
 gi|312907951|ref|ZP_07766934.1| ATP synthase F1, alpha subunit [Enterococcus faecalis DAPTO 512]
 gi|312953641|ref|ZP_07772478.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0102]
 gi|312978521|ref|ZP_07790259.1| ATP synthase F1, alpha subunit [Enterococcus faecalis DAPTO 516]
 gi|81436389|sp|Q831A3|ATPA_ENTFA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|29344561|gb|AAO82319.1| ATP synthase F1, alpha subunit [Enterococcus faecalis V583]
 gi|227072793|gb|EEI10756.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis TX0104]
 gi|227176731|gb|EEI57703.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis HH22]
 gi|229309914|gb|EEN75901.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis TX1322]
 gi|255962996|gb|EET95472.1| ATP synthase F1 [Enterococcus faecalis T1]
 gi|255967907|gb|EET98529.1| ATP synthase F1 [Enterococcus faecalis T2]
 gi|256596405|gb|EEU15581.1| ATP synthase F1 [Enterococcus faecalis ATCC 4200]
 gi|256684499|gb|EEU24194.1| ATP synthase F1 [Enterococcus faecalis T3]
 gi|256710864|gb|EEU25907.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis T8]
 gi|256948345|gb|EEU64977.1| ATP synthase F1 [Enterococcus faecalis DS5]
 gi|256951648|gb|EEU68280.1| ATP synthase F1 [Enterococcus faecalis Merz96]
 gi|256954225|gb|EEU70857.1| ATP synthase F1 [Enterococcus faecalis HIP11704]
 gi|256987817|gb|EEU75119.1| ATP synthase F1 [Enterococcus faecalis JH1]
 gi|256989897|gb|EEU77199.1| ATP synthase F1 [Enterococcus faecalis E1Sol]
 gi|256992439|gb|EEU79741.1| ATP synthase F1 [Enterococcus faecalis Fly1]
 gi|256995622|gb|EEU82924.1| ATP synthase F1 [Enterococcus faecalis D6]
 gi|256999563|gb|EEU86083.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis CH188]
 gi|257158627|gb|EEU88587.1| ATP synthase F1 [Enterococcus faecalis ARO1/DG]
 gi|257161843|gb|EEU91803.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis T11]
 gi|257163630|gb|EEU93590.1| F0F1 ATP synthase subunit alpha [Enterococcus faecalis X98]
 gi|291078578|gb|EFE15942.1| ATP synthase F1, alpha subunit [Enterococcus faecalis R712]
 gi|291083583|gb|EFE20546.1| ATP synthase F1, alpha subunit [Enterococcus faecalis S613]
 gi|294451517|gb|EFG19977.1| ATP synthase F1, alpha subunit [Enterococcus faecalis PC1.1]
 gi|295113589|emb|CBL32226.1| ATP synthase F1 subcomplex alpha subunit [Enterococcus sp. 7L76]
 gi|300849795|gb|EFK77545.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TUSoD Ef11]
 gi|306498569|gb|EFM68071.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0411]
 gi|306501303|gb|EFM70606.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0109]
 gi|306502768|gb|EFM72033.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0860]
 gi|306506495|gb|EFM75654.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX2134]
 gi|306511554|gb|EFM80553.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0855]
 gi|306512984|gb|EFM81625.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX4248]
 gi|310626042|gb|EFQ09325.1| ATP synthase F1, alpha subunit [Enterococcus faecalis DAPTO 512]
 gi|310628479|gb|EFQ11762.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0102]
 gi|310634051|gb|EFQ17334.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0635]
 gi|311288670|gb|EFQ67226.1| ATP synthase F1, alpha subunit [Enterococcus faecalis DAPTO 516]
 gi|311292980|gb|EFQ71536.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0470]
 gi|315025250|gb|EFT37182.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX2137]
 gi|315030333|gb|EFT42265.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX4000]
 gi|315032743|gb|EFT44675.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0017]
 gi|315035799|gb|EFT47731.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0027]
 gi|315143758|gb|EFT87774.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX2141]
 gi|315148585|gb|EFT92601.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX4244]
 gi|315150006|gb|EFT94022.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0012]
 gi|315151908|gb|EFT95924.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0031]
 gi|315155492|gb|EFT99508.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0043]
 gi|315159211|gb|EFU03228.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0312]
 gi|315162850|gb|EFU06867.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0645]
 gi|315164962|gb|EFU08979.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX1302]
 gi|315168601|gb|EFU12618.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX1341]
 gi|315170140|gb|EFU14157.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX1342]
 gi|315173361|gb|EFU17378.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX1346]
 gi|315576214|gb|EFU88405.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0309B]
 gi|315579209|gb|EFU91400.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0630]
 gi|315582930|gb|EFU95121.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX0309A]
 gi|323481546|gb|ADX80985.1| ATP synthase F1, alpha subunit [Enterococcus faecalis 62]
 gi|327535841|gb|AEA94675.1| ATP synthase F1 sector alpha subunit [Enterococcus faecalis OG1RF]
          Length = 518

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 108/421 (25%), Positives = 175/421 (41%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y + L V+  G ++ +         L +    G+ V     +    G    
Sbjct: 10  ALIKEQIENYQQQLAVEEVGTVTYVGDGIARAHGL-ENAMSGELVEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LETNDVGIIILGDFETIREGDKVQRTGKIMEVPVGEALIGRVVNPLGQPLDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  M RQ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 KTRPVEATAPGVMQRQSVAEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E       L  ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVRNQVETLRKFGALDYTIVVTAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|148257762|ref|YP_001242347.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1]
 gi|146409935|gb|ABQ38441.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1]
          Length = 440

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 163/435 (37%), Positives = 250/435 (57%), Gaps = 6/435 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           + LA+   D     V   G +  +  +   +      + +G  +V +  N+    +VI  
Sbjct: 2   KALAEQISDIDA--VNTYGRVVGVKGLMVEIAGPIHAMSVGARIVIETGNNVIPAEVIGF 59

Query: 66  NLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           +     + P    E +  G   V      ++ PS  W GRVINA+G+PIDG   L +G  
Sbjct: 60  SGKNAVVMPFAGLEGVRRGCRAVIANAANQVRPSPAWLGRVINAMGEPIDGKGPLPQGAA 119

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            +   +  PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR+
Sbjct: 120 PVPYRNNPPPAHSRKRVGSPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARN 179

Query: 185 DCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                 +I L+GERGREV+EF++ D   + L +SVVVVATSDE  ++R+ A    + I+E
Sbjct: 180 VDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAISE 239

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP    
Sbjct: 240 YFRDEGKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGSG- 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G IT + +VLVDGD+HN+P+AD+VR ILDGH+V+ RS+AE GRYP ++ L SVSR   K
Sbjct: 299 EGTITGIFTVLVDGDDHNEPVADAVRGILDGHVVMQRSIAERGRYPAINILKSVSRTMPK 358

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           +        +     ++  + +  ++  +G YR G    +D+A+     +  FL+Q   +
Sbjct: 359 SADPVFLPTIMRARQVMATYADMEELIRLGAYRAGSSPEVDEAIRLHEPLEAFLRQRKDE 418

Query: 424 LSS-EDVFQEITKKL 437
           +      ++E+ + L
Sbjct: 419 VCGLAQGYRELEQIL 433


>gi|73543030|ref|YP_297550.1| F0F1 ATP synthase subunit alpha [Ralstonia eutropha JMP134]
 gi|124007206|sp|Q46VX8|ATPA_RALEJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|72120443|gb|AAZ62706.1| ATP synthase F1, alpha subunit [Ralstonia eutropha JMP134]
          Length = 513

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 183/448 (40%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +     L     V   G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRISGLGADAEVRNTGTVISVTDGICRVHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGDYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKETDV-IEKVAPGVIARQSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +           +VVV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGIFCVYVAIGQKASTIANVVRKLEEHGAMEYTVVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVENFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKNLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + LKQ+      
Sbjct: 413 LDDATRKQLERGRRVTELLKQAQYQPQQ 440


>gi|332305662|ref|YP_004433513.1| flagellar protein export ATPase FliI [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172991|gb|AEE22245.1| flagellar protein export ATPase FliI [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 444

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 162/435 (37%), Positives = 246/435 (56%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           LE +  L +   +  VV  G +  +  +  T+  +   + +G   + Q  + +   +V+ 
Sbjct: 6   LENIKALQQQVPQAPVVAAGKL--VRGIGLTLEAVGCQMPVGSQCLIQTVDGEIEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
               I Y+ P    + I  G  V    R + +       GRV++  G+P+DG  ++ K +
Sbjct: 64  FAEHITYLMPTQAVKGIVPGSRVQPLNREQGLPVGMSLLGRVVDGNGQPLDGLGAI-KAE 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + +       ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 123 KRVPLTRPPMNPLSRKPIREPLDVGVRAINSMITVGSGQRMGLFAGSGVGKSVLLGMMTR 182

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               D V++ LVGERGREV+EFI+D LGD  + K+VVV A +D SP++R     TAVTIA
Sbjct: 183 GTSADVVVVGLVGERGREVKEFIQDILGDEERQKAVVVAAPADTSPLMRLKGCETAVTIA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G   +
Sbjct: 243 EYFRDKGMNVLLLVDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGGE 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LA+ G YP +D  AS+SR+  
Sbjct: 303 NQGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRQLADSGHYPAIDIEASISRVMP 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  ++   +  +   +++ RD+  IG Y  G D  +D ++   P I  FL+Q   
Sbjct: 363 MVVSPEHVQVARRIRQVYSTYQQNRDLISIGAYTRGNDPRIDLSIKAEPAINAFLQQGMQ 422

Query: 423 DLSSEDVFQEITKKL 437
            + + +   E   KL
Sbjct: 423 QILTFEESVETMVKL 437


>gi|187251921|ref|YP_001876403.1| ATP synthase F1 subunit alpha [Elusimicrobium minutum Pei191]
 gi|226739883|sp|B2KEX0|ATPA_ELUMP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|186972081|gb|ACC99066.1| ATP synthase F1, alpha subunit [Elusimicrobium minutum Pei191]
          Length = 512

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 177/436 (40%), Gaps = 23/436 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + +    N      + + G +  +      +  L   V  G+ +      
Sbjct: 1   MSLKAEEITSIIKSKIANFTPQADINETGTVLQVGDGIARIYGLKNAVA-GELLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +  G  + +  D +    +G    I  GD V   G+   +       GRV++ LGKP+D
Sbjct: 58  -NVKGLALNLETDNIGCVLMGEDSSIQEGDPVKRTGQVINVPVGDALLGRVVDPLGKPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K + S  +    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTNSSRPLEIVAPGVIERQPVKQPLQTGLKAIDSLVPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDES 227
           + +      +            +   +G++   V + ++       ++ +V+V A++ + 
Sbjct: 176 TAIAIDAILNQKNQPADQRTLCVYVAIGQKQSTVAQVVQTLTEFGAMEYTVIVSASAADP 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L  +AP    +IAE F     +VL+I D +++ A + R+++      P    YP  VF
Sbjct: 236 ASLLYIAPYAGSSIAEEFMWNKRDVLIIYDDLSKHAQAYRQMSLLLRRPPGREAYPGDVF 295

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G+ITA+  +    ++ +  I  +V SI DG I L   L   
Sbjct: 296 YLHSRLLERACKLSDKNGGGSITALPIIETQANDMSAYIPTNVISITDGQIYLESGLFHS 355

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P V+   SVSR+   A     + +  +L   + +++E         +   +D    +
Sbjct: 356 GMKPAVNVGLSVSRVGGSAQKKIMRSVSGTLRLDMSQYKELE---AFSQFGSDLDKESQQ 412

Query: 406 AVHQVPIIYDFLKQSP 421
            + +   I +  KQ  
Sbjct: 413 QLTRGKRINELFKQDQ 428


>gi|165933795|ref|YP_001650584.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. Iowa]
 gi|165908882|gb|ABY73178.1| ATP synthase alpha chain [Rickettsia rickettsii str. Iowa]
          Length = 560

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 187/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 62  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 111

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V +  +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 112 LVLNLENDSVGVVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDGKGDI 171

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 172 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 230

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 231 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 290

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 291 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 350

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 351 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 410

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 411 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 467

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+  +    E+    I
Sbjct: 468 IDHGKRLVEILKQAQYNPFPVEEQIVSI 495


>gi|55824842|gb|AAV66503.1| F1-ATPase alpha subunit [Plantago crassifolia]
          Length = 424

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 170/416 (40%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V          G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGL-KEIQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIQE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG   LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGAIVDVPAGKAMLGRVVDGLGLPIDGKGPLGAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNERATSEKETLFCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N    S++V AT+ +   L+ +AP +   + E+F   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILAEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEFFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            KK+  SL   + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 MKKVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQYNP 408


>gi|157376195|ref|YP_001474795.1| flagellum-specific ATP synthase [Shewanella sediminis HAW-EB3]
 gi|157318569|gb|ABV37667.1| flagellar protein export ATPase FliI [Shewanella sediminis HAW-EB3]
          Length = 446

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 154/435 (35%), Positives = 241/435 (55%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  +   +      +    G +  +  +    T       +G     +    + + +VI 
Sbjct: 9   LSKIKHQSIKVHPFVAEASGQLVRVVGLTLEATG--CRAPIGSLCSIETLAGELVAEVIG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + +++Y+ P+     +  G  V   G    ++      GRV++  G P+DG   L + +
Sbjct: 67  FDGELLYLMPIEELRGVLPGAKVTPLGEQTGLNVGMSLLGRVLDGSGHPLDGLGRL-QTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 S+V   ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QRAPRHSQVINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG+    +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADVIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGP 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHYPAIDIEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  + +  +  +   F++ +D+  IG Y  G D  +D A+   P +  FL+Q+  
Sbjct: 366 MVISPEHLESMRCVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQTMK 425

Query: 423 DLSSEDVFQEITKKL 437
           +  S D    +  +L
Sbjct: 426 EALSFDSSALMLSQL 440


>gi|257459082|ref|ZP_05624201.1| ATP synthase F1, alpha subunit [Campylobacter gracilis RM3268]
 gi|257443467|gb|EEV18591.1| ATP synthase F1, alpha subunit [Campylobacter gracilis RM3268]
          Length = 504

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 102/430 (23%), Positives = 181/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E++  ++ + + G + S+      V  L + V   + V  +       G  + 
Sbjct: 12  SIIKERIENFDLSVDIEETGKVVSVADGVANVYGL-KNVMANEMVEFENGAR---GIALN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G    I+ G  V   G+  R+       GRV+NALG+PIDG  ++   D
Sbjct: 68  LEESSVGIVILGDTSGINEGSSVKRLGKLLRVPVGDALIGRVVNALGEPIDGKGAIETSD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K    M R+ V +  +TG++ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-VEEKAKGIMARKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTVAVDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V + ++          ++VV A + E+  L+ +AP +  T
Sbjct: 187 NQKGQDVICIYVAIGQKQSTVAQVVKKLEEYGAMDYTIVVAAGASEAAALQYLAPYSGCT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF     + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 MGEYFRDNSRHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERASKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 SDALGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESGLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGSAQIKAIKKVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLDRGQRMVEILK 423

Query: 419 QSPSDLSSED 428
           Q P      +
Sbjct: 424 QPPYSPLPVE 433


>gi|89053538|ref|YP_508989.1| F0F1 ATP synthase subunit alpha [Jannaschia sp. CCS1]
 gi|119367955|sp|Q28TJ8|ATPA_JANSC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|88863087|gb|ABD53964.1| ATP synthase F1 subcomplex alpha subunit [Jannaschia sp. CCS1]
          Length = 512

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 104/447 (23%), Positives = 186/447 (41%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++Q+ +D  K+      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MAIQAAEISQILKDQIKSFGQDAQVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IQGMALNLEADNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGNELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +   SK P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINASERRVA-DSKAPGIIPRKSVHEPMATGLKAIDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
                 T+L+  + +D            I   VG++   V + ++       ++ S+VV 
Sbjct: 176 TAVALDTILNQKSYNDAAGDDENKKLYCIYVAVGQKRSTVAQLVKKLEETGAIEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AE+F   G + L++ D +++ A S R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEFFRDNGRHALIVYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSSKLNEDNGGGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFFQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + + +   + + +KQ      +
Sbjct: 413 DASTQRLLARGARLTELMKQPQYSPLT 439


>gi|121635592|ref|YP_975837.1| F0F1 ATP synthase subunit alpha [Neisseria meningitidis FAM18]
 gi|158513151|sp|A1KW13|ATPA_NEIMF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120867298|emb|CAM11069.1| ATP synthase alpha chain [Neisseria meningitidis FAM18]
 gi|254672597|emb|CBA06299.1| ATP synthase F1, alpha subunit [Neisseria meningitidis alpha275]
 gi|325199027|gb|ADY94483.1| ATP synthase F1, alpha subunit [Neisseria meningitidis G2136]
          Length = 515

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVVSVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|89898929|ref|YP_521400.1| F0F1 ATP synthase subunit alpha [Rhodoferax ferrireducens T118]
 gi|119367949|sp|Q223D4|ATPA1_RHOFD RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|89343666|gb|ABD67869.1| ATP synthase F1, alpha subunit [Rhodoferax ferrireducens T118]
          Length = 517

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 104/445 (23%), Positives = 188/445 (42%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK- 54
           MQ N   +++L +   + L     +   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLTAGANIRNQGTVVSVTDGIVRIHGLSD-VMQGEMLEFPADA 59

Query: 55  -NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS G+ V   GR   +       GRV+NALG+P
Sbjct: 60  EGQPSYGLALNLERDSVGAVILGAYEHISEGNTVKCTGRILEVPVGPELKGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V +  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPID-AKMTDVIEKVAPGVIARQSVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   V+  +           ++VV AT+ ES  
Sbjct: 179 GKTAVAIDAIINQKGQNMTCVYVAIGQKASSVKNVVRSLEQAGAMEYTIVVAATASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ +A  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER     ++              G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNEKYVEDFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKNLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDEATRKQLERGARVTELLKQAQ 440


>gi|57013987|ref|YP_173459.1| ATP synthase F1 subunit 1 [Nicotiana tabacum]
 gi|114407|sp|P05495|ATPAM_NICPL RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|13153|emb|CAA30568.1| unnamed protein product [Nicotiana plumbaginifolia]
          Length = 509

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 97/441 (21%), Positives = 175/441 (39%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E    N          G + S+      V  L++ +  G+ V      
Sbjct: 3   LSPRAAELTSLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA--- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ LG PID
Sbjct: 59  SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 178 TAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VAALAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|299069237|emb|CBJ40497.1| type III secretion system ATPase [Ralstonia solanacearum CMR15]
          Length = 439

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 158/437 (36%), Positives = 239/437 (54%), Gaps = 11/437 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQV 62
           L++L   A   +  L+ + G +  +T     V  +   V LG+       +   +  G+V
Sbjct: 7   LDSLETAA--RTTPLIRRFGKVVEVTGTLLRVGGVD--VRLGELCTLTEADGTVMQEGEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  +     + P      +S    V   GR   +       GRV++ LG+P DG   L  
Sbjct: 63  VGFSEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPPLEV 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            D  + + +  P  M R+ VE    TG+RVID    L  GQR+G+FA +G+GKSTL+ MF
Sbjct: 123 VDY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMF 181

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I L+GERGREVREFI +    + +++SVVV ATSD S + R  A      
Sbjct: 182 ARGTDCDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAYVGTA 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G S
Sbjct: 242 VAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMS 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L+S+SR+
Sbjct: 302 A--AGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILSSLSRV 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +       +  L+ ++ E   +  +G Y+ G D + D AV     +  FL+Q 
Sbjct: 360 MTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMESFLRQR 419

Query: 421 PSDLSSEDVFQEITKKL 437
             +  S D  + + +++
Sbjct: 420 TDEWCSPDETRRLLEEI 436


>gi|260886634|ref|ZP_05897897.1| flagellar protein export ATPase FliI [Selenomonas sputigena ATCC
           35185]
 gi|330839534|ref|YP_004414114.1| ATPase, FliI/YscN family [Selenomonas sputigena ATCC 35185]
 gi|260863777|gb|EEX78277.1| flagellar protein export ATPase FliI [Selenomonas sputigena ATCC
           35185]
 gi|329747298|gb|AEC00655.1| ATPase, FliI/YscN family [Selenomonas sputigena ATCC 35185]
          Length = 475

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 169/424 (39%), Positives = 240/424 (56%), Gaps = 13/424 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN---SDNLGQVIRINLDIVYICPVG 76
           +   G I  +  +   +      V +G+    + +         +V+      V + P+G
Sbjct: 58  IKMSGKIVQVIGLV--IESAGPNVSMGELCYVKSRFPHVEPIPAEVVGFRDGHVLLMPIG 115

Query: 77  IGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + I  G  V       ++       GRV++ LG+PIDG   L        + +  P  
Sbjct: 116 EMQGIGPGCEVVSAQKTLQVQVGPELLGRVLDGLGEPIDGKGPLL-CKHEYPLQADPPSP 174

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R R+      G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+   D  +I+LV
Sbjct: 175 LERPRIRDSLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEADISVIALV 234

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EFI  D   + LK+SVVVVATSD+  ++R    +TA  IAEYF  +G  V+L
Sbjct: 235 GERGREVKEFIERDLGEEGLKRSVVVVATSDKPALVRIKGAMTATAIAEYFRDQGKRVVL 294

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G S K  G+IT + +VL
Sbjct: 295 MMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFALLPRLLERAGTSRK--GSITGIYTVL 352

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PIAD+VRSILDGHIVL+R++A +  +P +D LASVSR+ ++       K   
Sbjct: 353 VDGDDMNEPIADAVRSILDGHIVLSRAIAAQNHFPAIDVLASVSRVMNEVVDEAHLKASQ 412

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +L  L+  ++E  D+  IG Y  G    +D AV ++  I DFL+Q   + SS   ++E  
Sbjct: 413 NLRALMAVYKEAEDLIHIGAYVKGSSQKIDTAVAKIDAINDFLRQGVFEQSS---YEETE 469

Query: 435 KKLQ 438
           K L+
Sbjct: 470 KTLE 473


>gi|224370585|ref|YP_002604749.1| F0F1 ATP synthase subunit alpha [Desulfobacterium autotrophicum
           HRM2]
 gi|223693302|gb|ACN16585.1| AtpA2 [Desulfobacterium autotrophicum HRM2]
          Length = 504

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 103/433 (23%), Positives = 188/433 (43%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++Q+ ++  K+      + + G + S+      V  L + V   + V   G  
Sbjct: 1   MKIKAEEISQIIKEQIKDFDKEVELSETGVVLSVGDGIARVYGLEK-VKAMELVEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + LG  + +  D V +  +G    I  GD+V    R   +       GRV++  G+PID
Sbjct: 58  -NILGLALNLEEDNVGVAILGEDRNIKEGDIVKRTDRIASVPVGEAVLGRVVSTTGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +    P  + R+ V +   TG + +D  TP+  GQR  +     IGK
Sbjct: 117 GKGPIDTTEFK-NMELIAPGVIARKSVHEPCYTGSKAVDGMTPVGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+ +   K I    G++   V + +           + VVVA++ E   ++
Sbjct: 176 TAIAVDAIIAQKNTDVKCIYVACGQKKSTVAQVVAALEEHGAMEYTTVVVASASEPAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG++ L+I D +++ A + R+++      P    +P  +F    
Sbjct: 236 YLAPFAGCAMGEYFRDKGEHALIIYDDLSKQAVAYRQVSLLLRRPPGREAFPGDIFYNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L++SL   G  P
Sbjct: 296 RLLERSAKLNDELGAGSLTALPIIETQEGDVSAFIPTNVISITDGQIYLDKSLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     K++  +L   + ++ E       G     +D    + + +
Sbjct: 356 AIDVGLSVSRVGGAAQCKAMKQVAGTLRLDLAQYRELEAFAAFG---SDLDAATQRQLTR 412

Query: 410 VPIIYDFLKQSPS 422
              + + LKQ   
Sbjct: 413 GERLVELLKQPQF 425


>gi|227544495|ref|ZP_03974544.1| ATP synthase F1, alpha subunit [Lactobacillus reuteri CF48-3A]
 gi|300909317|ref|ZP_07126778.1| ATP synthase F1 sector alpha subunit [Lactobacillus reuteri SD2112]
 gi|154705570|gb|ABS84211.1| ATP synthase F1 alpha subunit [Lactobacillus reuteri]
 gi|227185518|gb|EEI65589.1| ATP synthase F1, alpha subunit [Lactobacillus reuteri CF48-3A]
 gi|300893182|gb|EFK86541.1| ATP synthase F1 sector alpha subunit [Lactobacillus reuteri SD2112]
          Length = 509

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 174/426 (40%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA    K  V + G ++ +         L      G+ +          G    +  +
Sbjct: 14  KQLANYQDKVSVEETGTVTYVGDGVARADGL-DNAMAGELLEFSNG---VYGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G    I  GD V   GR   +       GRV+++LG+PIDG   + K D +  
Sbjct: 70  DVGIVILGDYTGIREGDTVKRTGRIMEVPVGDALLGRVVDSLGRPIDGLGEI-KTDKTRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSD 185
           I  K P  M R+ V    +TGI+VID   P+  GQR  +      GK+ +   ++  + +
Sbjct: 129 IERKAPGVMERKSVSVPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTAIALDTIINQKN 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G++   VR  +E          ++VV A++     +  +AP     + E 
Sbjct: 189 QDVICIYVAIGQKESTVRASVETLRKYGALDYTIVVSASASNPAPMLYIAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  +F    RLLER      + 
Sbjct: 249 FMFNGKDVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G+ P +D   SVSR+  
Sbjct: 309 GGGSMTALPIIQTQAGDVSAYIPTNVISITDGQIFLDSDEFYAGQRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   I  + E   +     +   +D      + +     + LKQ   
Sbjct: 369 DAQIKAMKKVAGTLRLDIASYNE---LASFAQFGSDLDAATQAKLARGQRTMEVLKQGLH 425

Query: 423 DLSSED 428
           D    +
Sbjct: 426 DPLPVE 431


>gi|328862967|gb|EGG12067.1| hypothetical protein MELLADRAFT_41776 [Melampsora larici-populina
           98AG31]
          Length = 550

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 108/429 (25%), Positives = 185/429 (43%), Gaps = 22/429 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + +I      V  L + V   + V     +S   G  + +  D V +   G   
Sbjct: 66  VQETGRVLTIGDGIARVYGL-RNVQAEEMVEF---SSGVRGMCLNLEADNVGVTIFGSDR 121

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GD V   G+   +       GRV++ALG PIDG   +   +     + K P  + R
Sbjct: 122 LIKEGDTVKRTGQIVDVPVGPELLGRVVDALGNPIDGKGPIACKERRRASL-KAPGVLPR 180

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----- 188
           + V +   TGI+ ID   P+  GQR  +      GK      T+L+    ++  D     
Sbjct: 181 RSVNQPMMTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNEGTDETQKL 240

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP +   + E+F  
Sbjct: 241 YCVYVAVGQKRSTVAQLVQTLEENDALKYSIIVAATASEAAPLQYLAPFSGCAMGEWFRD 300

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KG 305
            G + L+I D +++ A + R+++      P    YP  VF    RLLER     ++   G
Sbjct: 301 NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNEKLGGG 360

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A 
Sbjct: 361 SLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFKGVRPAINVGLSVSRVGSAAQ 420

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   K +  SL   + ++   RD+     +   +D      + +   + + LKQ      
Sbjct: 421 TKIMKSVSGSLKLYLAQY---RDVAAFAQFGSDLDASTRYLLSRGARLTELLKQGQYQPL 477

Query: 426 SEDVFQEIT 434
           + +V   I 
Sbjct: 478 AFEVQVPIL 486


>gi|194016315|ref|ZP_03054929.1| ATP synthase F1, alpha subunit [Bacillus pumilus ATCC 7061]
 gi|194011788|gb|EDW21356.1| ATP synthase F1, alpha subunit [Bacillus pumilus ATCC 7061]
          Length = 502

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  ++Y   + V   G +  +      V  L   +  G+ V         +G    
Sbjct: 10  ALIKQQIQNYQSEIEVKDVGTVIQVGDGIARVHGL-DNIMAGELVEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  ++I  GD V   GR   +       GR++N LG+P+DG   +    
Sbjct: 66  LEESNVGIVILGPYKDIREGDDVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -TRPIESEAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDQDMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP- 299
           + E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 304

Query: 300 -SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             EK  G+ITA+  V     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 SDEKGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAVNAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDLN 425


>gi|21241185|ref|NP_640767.1| type III secretion system ATPase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21106492|gb|AAM35303.1| HrcN protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 442

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 166/430 (38%), Positives = 243/430 (56%), Gaps = 12/430 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLAFGRRYGKVVELVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +       GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGES--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++  I DFL Q    LS  
Sbjct: 369 DHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLSQPTDRLS-- 426

Query: 428 DVFQEITKKL 437
             ++   ++L
Sbjct: 427 -AYESTLEQL 435


>gi|115350151|ref|YP_771990.1| F0F1 ATP synthase subunit alpha [Burkholderia ambifaria AMMD]
 gi|172059170|ref|YP_001806822.1| F0F1 ATP synthase subunit alpha [Burkholderia ambifaria MC40-6]
 gi|122324409|sp|Q0BJL7|ATPA_BURCM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739851|sp|B1YQL2|ATPA_BURA4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115280139|gb|ABI85656.1| ATP synthase F1 subcomplex alpha subunit [Burkholderia ambifaria
           AMMD]
 gi|171991687|gb|ACB62606.1| ATP synthase F1, alpha subunit [Burkholderia ambifaria MC40-6]
          Length = 513

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVAIDAIINQKGKDLVCIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|197132392|gb|ACH47714.1| ATP synthase CF1 alpha subunit [Geranium macrorrhizum]
          Length = 504

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 186/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  ++Y++ + +V  G +  +      +  L++ V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIKEYNREVKIVNMGTVLRVGDGIARIYGLNE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLMIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGGISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +        ++VV  T+     L+ +AP T   +A
Sbjct: 188 QGKDVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 NLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---AFAQFASDLDQNTQNQLERGRRLRELLKQS 424

Query: 421 PSDL 424
            S+ 
Sbjct: 425 QSEP 428


>gi|87125417|ref|ZP_01081263.1| ATP synthase F1, alpha subunit [Synechococcus sp. RS9917]
 gi|86167186|gb|EAQ68447.1| ATP synthase F1, alpha subunit [Synechococcus sp. RS9917]
          Length = 506

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 112/424 (26%), Positives = 180/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYIS-SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V        +      V  L Q    G+ +  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGSVLQVGDGIARVYGL-QQAMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N LG+PIDG   L   +
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSTVRATGKIASVPVGDALLGRVVNPLGQPIDGKGDLATNE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   VG++   V +  E          +VVV A + E   L+ +AP T  +
Sbjct: 186 NQKDQDVVCVYVAVGQKAASVAQVTEVLRERGALDYTVVVAANASEPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEFFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQKQLGRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|254571387|ref|XP_002492803.1| Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia pastoris GS115]
 gi|238032601|emb|CAY70624.1| Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia pastoris GS115]
 gi|328353189|emb|CCA39587.1| F-type H+-transporting ATPase subunit alpha [Pichia pastoris CBS
           7435]
          Length = 546

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+      V  L+      + V     +S   G  + +    V I   G    +
Sbjct: 65  ETGRVLSVGDGIARVFGLNNCQAE-ELVEF---SSGVKGMALNLEPGQVGIVLFGSDRGV 120

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V   G+   +       GRVI+ALG PIDG   +    ++     K P  + R  
Sbjct: 121 KEGDTVKRTGKIVDVPVGPELLGRVIDALGNPIDGKGPIN-SKVTSRAQLKAPGILPRTS 179

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    ++  D       
Sbjct: 180 VFEPMQTGLKSVDALVPVGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYC 239

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP TA  + E+F   G
Sbjct: 240 VYVAVGQKRSTVAQLVQTLEQNDALKYSIIVAATASEAAPLQYLAPFTACAVGEWFRDNG 299

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G++
Sbjct: 300 KHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKLGGGSL 359

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 360 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 419

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + +++   +   LKQ  
Sbjct: 420 AMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQ 470


>gi|81580386|sp|Q814W0|ATPA_BACCR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|29898900|gb|AAP12171.1| ATP synthase alpha chain [Bacillus cereus ATCC 14579]
 gi|118419571|gb|ABK87990.1| ATP synthase F1 subcomplex alpha subunit [Bacillus thuringiensis
           str. Al Hakam]
          Length = 505

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 13  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 69  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 129 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +AP   VT
Sbjct: 188 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVT 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 308 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 368 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 424

Query: 419 QSPS 422
           Q   
Sbjct: 425 QGLH 428


>gi|269101102|ref|YP_003289250.1| ATP synthase CF1, subunit alpha [Ectocarpus siliculosus]
 gi|266631610|emb|CAV31281.1| ATP synthase CF1, subunit alpha [Ectocarpus siliculosus]
 gi|270118740|emb|CAT18823.1| ATP synthase CF1, subunit alpha [Ectocarpus siliculosus]
          Length = 501

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  EDYS +L +   G +  +      V  L + V  G+ +     +   +G  + + 
Sbjct: 11  IRKQIEDYSTDLNIDIIGTVLQVGDGIARVYGLDE-VMAGELLEF---DEGTVGIALNLE 66

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G EI  G  V   GR  +I       GRV++ L  PIDG       +  
Sbjct: 67  NDNVGAVLMGDGREILEGSTVKATGRIAQIPVGDSLLGRVLDPLAIPIDGKGEATSTESR 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      + 
Sbjct: 127 L-IESMAPGIISRKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIALDTIINQ 185

Query: 186 CF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + + +    + L  +V+V A +D+   L+ +AP T   IA
Sbjct: 186 KGQDVVCVYVAIGQKASSVAQAVTNLQEKEALDYTVIVAANADQPATLQYIAPYTGAAIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 246 EYFMYTGKHTLVVYDDLSKQASAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLND 305

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 306 GLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGLRPAINVGISVSRV 365

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F+E         +   +D      + +   + + LKQ+
Sbjct: 366 GSAAQIKAMKQVAGKLKLELAQFDELE---AFSQFASDLDKATQNQLARGKRLREILKQA 422

Query: 421 PS 422
            +
Sbjct: 423 QN 424


>gi|229147848|ref|ZP_04276189.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST24]
 gi|228635498|gb|EEK91987.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST24]
          Length = 502

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|161869277|ref|YP_001598444.1| F0F1 ATP synthase subunit alpha [Neisseria meningitidis 053442]
 gi|254804249|ref|YP_003082470.1| ATP synthase alpha chain [Neisseria meningitidis alpha14]
 gi|304388488|ref|ZP_07370591.1| ATP synthase F1 sector alpha subunit [Neisseria meningitidis ATCC
           13091]
 gi|189081305|sp|A9M121|ATPA_NEIM0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161594830|gb|ABX72490.1| ATP synthase alpha chain [Neisseria meningitidis 053442]
 gi|254667791|emb|CBA03750.1| ATP synthase alpha chain [Neisseria meningitidis alpha14]
 gi|261393266|emb|CAX50892.1| ATP synthase alpha chain [Neisseria meningitidis 8013]
 gi|304337485|gb|EFM03651.1| ATP synthase F1 sector alpha subunit [Neisseria meningitidis ATCC
           13091]
 gi|308390034|gb|ADO32354.1| ATP synthase alpha chain [Neisseria meningitidis alpha710]
 gi|325129474|gb|EGC52304.1| ATP synthase F1, alpha subunit [Neisseria meningitidis OX99.30304]
 gi|325131659|gb|EGC54365.1| ATP synthase F1, alpha subunit [Neisseria meningitidis M6190]
 gi|325133397|gb|EGC56061.1| ATP synthase F1, alpha subunit [Neisseria meningitidis M13399]
 gi|325135529|gb|EGC58147.1| ATP synthase F1, alpha subunit [Neisseria meningitidis M0579]
 gi|325137522|gb|EGC60105.1| ATP synthase F1, alpha subunit [Neisseria meningitidis ES14902]
 gi|325141530|gb|EGC64000.1| ATP synthase F1, alpha subunit [Neisseria meningitidis 961-5945]
 gi|325143647|gb|EGC65966.1| ATP synthase F1, alpha subunit [Neisseria meningitidis M01-240013]
 gi|325201425|gb|ADY96879.1| ATP synthase F1, alpha subunit [Neisseria meningitidis M01-240149]
 gi|325204888|gb|ADZ00342.1| ATP synthase F1, alpha subunit [Neisseria meningitidis M01-240355]
 gi|325206843|gb|ADZ02296.1| ATP synthase F1, alpha subunit [Neisseria meningitidis M04-240196]
 gi|325207406|gb|ADZ02858.1| ATP synthase F1, alpha subunit [Neisseria meningitidis NZ-05/33]
          Length = 515

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|55824840|gb|AAV66502.1| F1-ATPase alpha subunit [Plantago coronopus]
 gi|55824846|gb|AAV66505.1| F1-ATPase alpha subunit [Plantago subspathulata]
          Length = 424

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 167/414 (40%), Gaps = 23/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V          G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGL-KEIQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIQE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG   LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGRAMLGRVVDGLGLPIDGKGPLGAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKILNERATSEKETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N    S++V AT+ +   L+ +AP +   + E+F     
Sbjct: 176 YVAIGQKRSTVAQLVQILAEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEFFRDNAM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER          G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ   
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQF 406


>gi|78064763|ref|YP_367532.1| F0F1 ATP synthase subunit alpha [Burkholderia sp. 383]
 gi|115312239|sp|Q39KX8|ATPA_BURS3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|77965508|gb|ABB06888.1| ATP synthase F1 subcomplex alpha subunit [Burkholderia sp. 383]
          Length = 513

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|325525635|gb|EGD03409.1| F0F1 ATP synthase subunit alpha [Burkholderia sp. TJI49]
          Length = 513

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMAYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|240114815|ref|ZP_04728877.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID18]
 gi|268600471|ref|ZP_06134638.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID18]
 gi|268584602|gb|EEZ49278.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID18]
          Length = 515

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVSTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + LG  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTLGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  +    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPVEKIAPGVIARKSVDQPMQTGLKAIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + + S    +        I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVASDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|157694079|ref|YP_001488541.1| F0F1 ATP synthase subunit alpha [Bacillus pumilus SAFR-032]
 gi|166990354|sp|A8FIB4|ATPA_BACP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157682837|gb|ABV63981.1| H(+)-transporting two-sector ATPase, F(1) alpha subunit [Bacillus
           pumilus SAFR-032]
          Length = 502

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  ++Y   + V   G +  +      V  L   +  G+ V         +G    
Sbjct: 10  ALIKQQIQNYQSEIEVKDVGTVIQVGDGIARVHGL-DNIMAGELVEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  ++I  GD V   GR   +       GR++N LG+P+DG   +    
Sbjct: 66  LEESNVGIVILGPYKDIREGDDVKRTGRIMEVPVGEELIGRIVNPLGQPVDGLGPILTSK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -TRPIESEAPGVMDRKSVHEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDQDMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  V     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 SDAKGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAVNAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDQATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDLN 425


>gi|33863734|ref|NP_895294.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9313]
 gi|81712676|sp|Q7V5S7|ATPA_PROMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33635317|emb|CAE21642.1| ATP synthase alpha subunit, central region [Prochlorococcus marinus
           str. MIT 9313]
          Length = 505

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY K++ V   G +  I      V  L Q V  G+ V  +       G  + 
Sbjct: 11  AILKQQISDYDKSVSVSNVGTVLQIGDGIARVYGLEQ-VMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +  S    GRV+  LG+P+DG   +   +
Sbjct: 67  LEDDNVGAVLMGEGVGIQEGSTVKATGKIASVPVSDEMLGRVVTPLGQPMDGKGDIPSTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESIAPGIIKRKSVHEPLQTGITSIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   +E          +V+V A++ +   L+ +AP T   
Sbjct: 186 NQKGEDVVCVYVAVGQKAASVANVVEVLREKGALDYTVIVAASASDPAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               G+  +TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGSGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E         +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDEL---AAFSQFASDLDEATQKQLGRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|187233919|gb|ACD01206.1| ATP synthase CF1 alpha subunit [Phyllostachys propinqua]
          Length = 507

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 105/431 (24%), Positives = 184/431 (42%), Gaps = 15/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L   +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENFGRVIQVGDGIARIIGLGGIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSPSDLSSED 428
           KQS S+  S +
Sbjct: 422 KQSQSNPLSVE 432


>gi|206558438|ref|YP_002229198.1| F0F1 ATP synthase subunit alpha [Burkholderia cenocepacia J2315]
 gi|226739853|sp|B4EEY7|ATPA_BURCJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|198034475|emb|CAR50340.1| ATP synthase alpha chain [Burkholderia cenocepacia J2315]
          Length = 513

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|171315828|ref|ZP_02905059.1| ATP synthase F1, alpha subunit [Burkholderia ambifaria MEX-5]
 gi|171099017|gb|EDT43802.1| ATP synthase F1, alpha subunit [Burkholderia ambifaria MEX-5]
          Length = 513

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|319944940|ref|ZP_08019202.1| ATP synthase F1 sector alpha subunit [Lautropia mirabilis ATCC
           51599]
 gi|319741510|gb|EFV93935.1| ATP synthase F1 sector alpha subunit [Lautropia mirabilis ATCC
           51599]
          Length = 513

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 111/443 (25%), Positives = 190/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL V       G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPAEISELLKSKIQNLEVSADSRNQGTVISVTDGICRIHGLS-NVMQGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV+N LG+PID
Sbjct: 58  -NVYGLALNLERDSVGAVILGEYESISEGDVVKTTGRILEVPVGPELIGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKETDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +        ++ ++VV AT+ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLICIYVAIGQKASTIANVVRKLEEFGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL       + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAVNPGISVSRVGGAAQTGLIKKLAGGSRIALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           ++    K +    ++ + +KQ+ 
Sbjct: 413 LEESTRKQLDHGRLVTELMKQAQ 435


>gi|30248228|ref|NP_840298.1| F0F1 ATP synthase subunit alpha [Nitrosomonas europaea ATCC 19718]
 gi|81722254|sp|Q82XQ0|ATPA_NITEU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|30180113|emb|CAD84115.1| FoF1-type ATP synthase alpha subunit [Nitrosomonas europaea ATCC
           19718]
          Length = 513

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L V       G I S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSKIEGLSVTSEFRTQGTIVSLTDGIVRVHGLSD-VMQGEMLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E +  GD+V    R   +       GRV+NALG+PID
Sbjct: 59  --TFGLALNLERDSVGAVILGAYEHLKEGDIVKCTSRILEVPVGEALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-AAEGTEPIEKIAPGVVWRKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VVVA++ ES  ++
Sbjct: 176 TAVAIDAIINQKGEDVICIYVAIGQKASSIANVVRKLEEVGAMAYTIVVVASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  KG + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFRDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKATGGKVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +  +  + +KQS 
Sbjct: 413 LDEATRKQLERGKMATELMKQSQ 435


>gi|330684799|gb|EGG96492.1| ATP synthase F1, alpha subunit [Staphylococcus epidermidis VCU121]
          Length = 502

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V  Q      LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFQNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   +IS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYTDISEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   VR  +E          ++VV A++ E   L  +AP   VT
Sbjct: 185 NQKTEDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTARKLERGKRTVEILK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|226941916|ref|YP_002796990.1| AtpA [Laribacter hongkongensis HLHK9]
 gi|254808102|sp|C1D5G4|ATPA_LARHH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226716843|gb|ACO75981.1| AtpA [Laribacter hongkongensis HLHK9]
          Length = 514

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 184/444 (41%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L     +NL         G + S+T     +  L +    G+ +   G  
Sbjct: 1   MQLNPSEISELIRAKIQNLPSATEARTTGTVISVTDGVIRIHGL-KDAMQGEMLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 59  --TYGLALNLERDSVGAVVLGEYEHISEGDEVKCTGRILEVPVGPELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +   S  +    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QAKASSPVEKVAPGVIARKSVDQPLQTGLKGIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +           +++V A++ E+  L+
Sbjct: 176 TAVALDAIINQKGSGVICIYVAIGQKASSIANVVRKLEEHGAMDHTIIVAASASETAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF   G + L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEYFRDTGRDSLIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKLTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAVNAGISVSRVGGAAQTNVIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    I+ + +KQ   
Sbjct: 413 LDEATRKQLSHGEIVTELMKQKQF 436


>gi|159161238|ref|YP_001542516.1| ATP synthase CF1 alpha subunit [Cuscuta exaltata]
 gi|190358166|sp|A8W3A9|ATPA_CUSEX RecName: Full=ATP synthase subunit alpha, plastid; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|158938663|gb|ABW83680.1| ATP synthase CF1 alpha subunit [Cuscuta exaltata]
          Length = 507

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E Y++ +  +  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  KIIRERIEQYNREVNTLNTGTVLQVGDGIARINGLDE-VMAGELVEFEEG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V   GR  +I     + GRVINA   PIDG   +    
Sbjct: 67  LESKNVGVVLMGDGLMIKEGSSVKATGRIAQIPVGEAYLGRVINAQANPIDGRGKISSSA 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ + +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESSAPGIISRRSIYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF     + L+I D +++ A + R+I+      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYSERHTLIIYDDLSKQAQAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSKLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKTSQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|107024493|ref|YP_622820.1| F0F1 ATP synthase subunit alpha [Burkholderia cenocepacia AU 1054]
 gi|116688128|ref|YP_833751.1| F0F1 ATP synthase subunit alpha [Burkholderia cenocepacia HI2424]
 gi|170731475|ref|YP_001763422.1| F0F1 ATP synthase subunit alpha [Burkholderia cenocepacia MC0-3]
 gi|254246696|ref|ZP_04940017.1| ATP synthase F1 alpha subunit [Burkholderia cenocepacia PC184]
 gi|118573474|sp|Q1BRA8|ATPA_BURCA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158512273|sp|A0K2Y1|ATPA_BURCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739852|sp|B1JSV5|ATPA_BURCC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|105894682|gb|ABF77847.1| ATP synthase F1 subcomplex alpha subunit [Burkholderia cenocepacia
           AU 1054]
 gi|116646217|gb|ABK06858.1| ATP synthase F1 subcomplex alpha subunit [Burkholderia cenocepacia
           HI2424]
 gi|124871472|gb|EAY63188.1| ATP synthase F1 alpha subunit [Burkholderia cenocepacia PC184]
 gi|169814717|gb|ACA89300.1| ATP synthase F1, alpha subunit [Burkholderia cenocepacia MC0-3]
          Length = 513

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|30265330|ref|NP_847707.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Ames]
 gi|42784477|ref|NP_981724.1| F0F1 ATP synthase subunit alpha [Bacillus cereus ATCC 10987]
 gi|47530869|ref|YP_022218.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47569802|ref|ZP_00240473.1| ATP synthase F1, alpha subunit [Bacillus cereus G9241]
 gi|49188143|ref|YP_031396.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Sterne]
 gi|49480407|ref|YP_039299.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140254|ref|YP_086576.1| F0F1 ATP synthase subunit alpha [Bacillus cereus E33L]
 gi|65317284|ref|ZP_00390243.1| COG0056: F0F1-type ATP synthase, alpha subunit [Bacillus anthracis
           str. A2012]
 gi|161511197|ref|NP_834970.2| F0F1 ATP synthase subunit alpha [Bacillus cereus ATCC 14579]
 gi|162382767|ref|YP_897497.2| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis str. Al
           Hakam]
 gi|165873333|ref|ZP_02217936.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0488]
 gi|167636401|ref|ZP_02394701.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0442]
 gi|167642062|ref|ZP_02400288.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0193]
 gi|170689702|ref|ZP_02880879.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0465]
 gi|170709433|ref|ZP_02899841.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0389]
 gi|177656030|ref|ZP_02937137.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0174]
 gi|190569418|ref|ZP_03022302.1| ATP synthase F1, alpha subunit [Bacillus anthracis Tsiankovskii-I]
 gi|196039534|ref|ZP_03106839.1| ATP synthase F1, alpha subunit [Bacillus cereus NVH0597-99]
 gi|196045592|ref|ZP_03112822.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB108]
 gi|206970269|ref|ZP_03231222.1| ATP synthase F1, alpha subunit [Bacillus cereus AH1134]
 gi|206976910|ref|ZP_03237812.1| ATP synthase F1, alpha subunit [Bacillus cereus H3081.97]
 gi|217962796|ref|YP_002341374.1| F0F1 ATP synthase subunit alpha [Bacillus cereus AH187]
 gi|218906484|ref|YP_002454318.1| ATP synthase F1, alpha subunit [Bacillus cereus AH820]
 gi|222098778|ref|YP_002532836.1| f0f1 ATP synthase subunit alpha [Bacillus cereus Q1]
 gi|225867284|ref|YP_002752662.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB102]
 gi|227818070|ref|YP_002818079.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. CDC 684]
 gi|228917916|ref|ZP_04081452.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930314|ref|ZP_04093318.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936592|ref|ZP_04099386.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949028|ref|ZP_04111300.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228955554|ref|ZP_04117557.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228961571|ref|ZP_04123180.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228988532|ref|ZP_04148619.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229050978|ref|ZP_04194527.1| ATP synthase subunit alpha [Bacillus cereus AH676]
 gi|229072774|ref|ZP_04205973.1| ATP synthase subunit alpha [Bacillus cereus F65185]
 gi|229082521|ref|ZP_04214984.1| ATP synthase subunit alpha [Bacillus cereus Rock4-2]
 gi|229094417|ref|ZP_04225489.1| ATP synthase subunit alpha [Bacillus cereus Rock3-42]
 gi|229124811|ref|ZP_04253989.1| ATP synthase subunit alpha [Bacillus cereus 95/8201]
 gi|229130557|ref|ZP_04259513.1| ATP synthase subunit alpha [Bacillus cereus BDRD-Cer4]
 gi|229142049|ref|ZP_04270574.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST26]
 gi|229153471|ref|ZP_04281649.1| ATP synthase subunit alpha [Bacillus cereus m1550]
 gi|229158869|ref|ZP_04286926.1| ATP synthase subunit alpha [Bacillus cereus ATCC 4342]
 gi|229181555|ref|ZP_04308881.1| ATP synthase subunit alpha [Bacillus cereus 172560W]
 gi|229187533|ref|ZP_04314673.1| ATP synthase subunit alpha [Bacillus cereus BGSC 6E1]
 gi|229193559|ref|ZP_04320503.1| ATP synthase subunit alpha [Bacillus cereus ATCC 10876]
 gi|229199431|ref|ZP_04326094.1| ATP synthase subunit alpha [Bacillus cereus m1293]
 gi|229603396|ref|YP_002869522.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0248]
 gi|254686270|ref|ZP_05150129.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724266|ref|ZP_05186050.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. A1055]
 gi|254735235|ref|ZP_05192944.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744439|ref|ZP_05202119.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Kruger B]
 gi|254755743|ref|ZP_05207776.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Vollum]
 gi|254759524|ref|ZP_05211549.1| F0F1 ATP synthase subunit alpha [Bacillus anthracis str. Australia
           94]
 gi|296505735|ref|YP_003667435.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis BMB171]
 gi|300117818|ref|ZP_07055585.1| F0F1 ATP synthase subunit alpha [Bacillus cereus SJ1]
 gi|301056775|ref|YP_003794986.1| ATP synthase subunit A [Bacillus anthracis CI]
 gi|81568735|sp|Q72XE6|ATPA_BACC1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81613473|sp|Q6HAX7|ATPA_BACHK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81685357|sp|Q630U1|ATPA_BACCZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81714853|sp|Q81JZ3|ATPA_BACAN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158512704|sp|A0RL97|ATPA_BACAH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739844|sp|B7JGN2|ATPA_BACC0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739847|sp|B7HY67|ATPA_BACC7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807674|sp|C3P1F6|ATPA_BACAA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807675|sp|C3LFI1|ATPA_BACAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807676|sp|C1F0N0|ATPA_BACC3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807677|sp|B9IRT9|ATPA_BACCQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|30260008|gb|AAP29193.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. Ames]
 gi|42740409|gb|AAS44332.1| ATP synthase F1, alpha subunit [Bacillus cereus ATCC 10987]
 gi|47506017|gb|AAT34693.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47553544|gb|EAL11924.1| ATP synthase F1, alpha subunit [Bacillus cereus G9241]
 gi|49182070|gb|AAT57446.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. Sterne]
 gi|49331963|gb|AAT62609.1| ATP synthase F1, alpha subunit [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973723|gb|AAU15273.1| ATP synthase F1, alpha subunit [Bacillus cereus E33L]
 gi|164710930|gb|EDR16504.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0488]
 gi|167509980|gb|EDR85400.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0193]
 gi|167528235|gb|EDR91017.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0442]
 gi|170125666|gb|EDS94585.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0389]
 gi|170666344|gb|EDT17130.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0465]
 gi|172079885|gb|EDT64994.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0174]
 gi|190559473|gb|EDV13474.1| ATP synthase F1, alpha subunit [Bacillus anthracis Tsiankovskii-I]
 gi|196023423|gb|EDX62100.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB108]
 gi|196029694|gb|EDX68296.1| ATP synthase F1, alpha subunit [Bacillus cereus NVH0597-99]
 gi|206734846|gb|EDZ52015.1| ATP synthase F1, alpha subunit [Bacillus cereus AH1134]
 gi|206744876|gb|EDZ56281.1| ATP synthase F1, alpha subunit [Bacillus cereus H3081.97]
 gi|217064940|gb|ACJ79190.1| ATP synthase F1, alpha subunit [Bacillus cereus AH187]
 gi|218538070|gb|ACK90468.1| ATP synthase F1, alpha subunit [Bacillus cereus AH820]
 gi|221242837|gb|ACM15547.1| ATP synthase F1, alpha subunit [Bacillus cereus Q1]
 gi|225787520|gb|ACO27737.1| ATP synthase F1, alpha subunit [Bacillus cereus 03BB102]
 gi|227004759|gb|ACP14502.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. CDC 684]
 gi|228584007|gb|EEK42162.1| ATP synthase subunit alpha [Bacillus cereus m1293]
 gi|228589864|gb|EEK47739.1| ATP synthase subunit alpha [Bacillus cereus ATCC 10876]
 gi|228595900|gb|EEK53580.1| ATP synthase subunit alpha [Bacillus cereus BGSC 6E1]
 gi|228601923|gb|EEK59418.1| ATP synthase subunit alpha [Bacillus cereus 172560W]
 gi|228624480|gb|EEK81250.1| ATP synthase subunit alpha [Bacillus cereus ATCC 4342]
 gi|228630075|gb|EEK86726.1| ATP synthase subunit alpha [Bacillus cereus m1550]
 gi|228641338|gb|EEK97644.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST26]
 gi|228652896|gb|EEL08778.1| ATP synthase subunit alpha [Bacillus cereus BDRD-Cer4]
 gi|228658602|gb|EEL14264.1| ATP synthase subunit alpha [Bacillus cereus 95/8201]
 gi|228688954|gb|EEL42781.1| ATP synthase subunit alpha [Bacillus cereus Rock3-42]
 gi|228700953|gb|EEL53476.1| ATP synthase subunit alpha [Bacillus cereus Rock4-2]
 gi|228710265|gb|EEL62240.1| ATP synthase subunit alpha [Bacillus cereus F65185]
 gi|228722355|gb|EEL73751.1| ATP synthase subunit alpha [Bacillus cereus AH676]
 gi|228771149|gb|EEM19628.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228798053|gb|EEM45057.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804116|gb|EEM50732.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228810601|gb|EEM56950.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823027|gb|EEM68865.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829300|gb|EEM74933.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841713|gb|EEM86824.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229267804|gb|ACQ49441.1| ATP synthase F1, alpha subunit [Bacillus anthracis str. A0248]
 gi|296326787|gb|ADH09715.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis BMB171]
 gi|298724682|gb|EFI65357.1| F0F1 ATP synthase subunit alpha [Bacillus cereus SJ1]
 gi|300378944|gb|ADK07848.1| ATP synthase subunit A [Bacillus cereus biovar anthracis str. CI]
 gi|324329255|gb|ADY24515.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 502

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|218234406|ref|YP_002370083.1| F0F1 ATP synthase subunit alpha [Bacillus cereus B4264]
 gi|229112721|ref|ZP_04242254.1| ATP synthase subunit alpha [Bacillus cereus Rock1-15]
 gi|226739846|sp|B7HFK4|ATPA_BACC4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218162363|gb|ACK62355.1| ATP synthase F1, alpha subunit [Bacillus cereus B4264]
 gi|228670702|gb|EEL26013.1| ATP synthase subunit alpha [Bacillus cereus Rock1-15]
          Length = 502

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|259415733|ref|ZP_05739653.1| ATP synthase F1, alpha subunit [Silicibacter sp. TrichCH4B]
 gi|259347172|gb|EEW58949.1| ATP synthase F1, alpha subunit [Silicibacter sp. TrichCH4B]
          Length = 513

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 183/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLESDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGPELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIEAKERKVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
                 T+L+  + +D            +   VG++   V + ++          S+VV 
Sbjct: 176 TAIALDTILNQKSYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEESGAMAYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEYFRDSGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTDAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + + +   + + +KQ      +
Sbjct: 413 DAATQQLLARGARLTELMKQPQYSPLT 439


>gi|269991257|emb|CAX12435.1| ATP synthase CF1 alpha chain [Fucus vesiculosus]
          Length = 501

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 101/422 (23%), Positives = 181/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  EDYS +L +   G +  +      V  L + V  G+ +     +   +G  + + 
Sbjct: 11  IRKQIEDYSTDLNIDIIGTVLQVGDGIARVYGLDE-VMAGELLEF---DEGTIGIALNLE 66

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G +I  G  V   GR  +I       GRV++ L + IDG   +   +  
Sbjct: 67  NDNVGAVLMGDGRDILEGSTVKATGRIAQIPVGENLLGRVLDPLARAIDGKGEVQTTETR 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TGI  ID   P+  G R  +      GK+++      + 
Sbjct: 127 L-IESMAPGIISRKSVCEPLQTGITAIDAMIPIGRGHRELIIGDRQTGKTSIALDTIINQ 185

Query: 186 CF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + + +    + L  +V+V A +D+   L+ +AP T   IA
Sbjct: 186 KGENVVCVYVAIGQKASSVAQAVTNLQEKEALSYTVIVAANADQPATLQYIAPYTGAAIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F   G + L++ D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 246 EFFMYTGKHTLVVYDDLSKQASAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLND 305

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 306 VLGNGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGLRPAINVGISVSRV 365

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+   L   + +F E         +   +D      + +   + + LKQ+
Sbjct: 366 GSAAQIKAMKKVAGKLKLELAQFAELE---AFSQFASDLDKATQAQLARGQRLREILKQA 422

Query: 421 PS 422
            +
Sbjct: 423 QN 424


>gi|134294236|ref|YP_001117971.1| F0F1 ATP synthase subunit alpha [Burkholderia vietnamiensis G4]
 gi|166201654|sp|A4JA33|ATPA_BURVG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|134137393|gb|ABO53136.1| ATP synthase F1 subcomplex alpha subunit [Burkholderia
           vietnamiensis G4]
          Length = 513

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDVVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGIKSIDAMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDAIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|299537990|ref|ZP_07051276.1| ATP synthase subunit alpha [Lysinibacillus fusiformis ZC1]
 gi|298726572|gb|EFI67161.1| ATP synthase subunit alpha [Lysinibacillus fusiformis ZC1]
          Length = 502

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V + G +  I         L      G+ +         +G    
Sbjct: 10  SLIKQQIENYESELKVSEVGTVIRIGDGIALAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G   +I  GD V   GR   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEEGNVGIVILGPYTDIKEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            S  I S     M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -SRPIESPAFGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     I   +G++   VR  +E          ++VV A++ +   L  +AP   V+
Sbjct: 185 NQNDQNMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASQPAPLLFLAPFAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMLQGKHVLIVYDDLSKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NETYQNGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFNSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D +    + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLAAFRELESFAQFG---SDLDKVTLAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDLN 425


>gi|148543700|ref|YP_001271070.1| F0F1 ATP synthase subunit alpha [Lactobacillus reuteri DSM 20016]
 gi|184153110|ref|YP_001841451.1| ATP synthase alpha subunit [Lactobacillus reuteri JCM 1112]
 gi|194468263|ref|ZP_03074249.1| ATP synthase F1, alpha subunit [Lactobacillus reuteri 100-23]
 gi|227363321|ref|ZP_03847450.1| ATP synthase F1, alpha subunit [Lactobacillus reuteri MM2-3]
 gi|325682071|ref|ZP_08161589.1| ATP synthase F1 sector alpha subunit [Lactobacillus reuteri MM4-1A]
 gi|166990358|sp|A5VIQ9|ATPA_LACRD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739902|sp|B2G689|ATPA_LACRJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148530734|gb|ABQ82733.1| ATP synthase F1 subcomplex alpha subunit [Lactobacillus reuteri DSM
           20016]
 gi|183224454|dbj|BAG24971.1| ATP synthase alpha subunit [Lactobacillus reuteri JCM 1112]
 gi|194453116|gb|EDX42014.1| ATP synthase F1, alpha subunit [Lactobacillus reuteri 100-23]
 gi|227071628|gb|EEI09922.1| ATP synthase F1, alpha subunit [Lactobacillus reuteri MM2-3]
 gi|324978715|gb|EGC15664.1| ATP synthase F1 sector alpha subunit [Lactobacillus reuteri MM4-1A]
          Length = 509

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 174/426 (40%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA    K  V + G ++ +         L      G+ +          G    +  +
Sbjct: 14  KQLANYQDKVSVEETGTVTYVGDGVARADGL-DNAMAGELLEFSNG---VYGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G    I  GD V   GR   +       GRV+++LG+PIDG   + K D +  
Sbjct: 70  DVGIVILGDYTGIREGDTVKRTGRIMEVPVGDALLGRVVDSLGRPIDGLGEI-KTDKTRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSD 185
           I  K P  M R+ V    +TGI+VID   P+  GQR  +      GK+ +   ++  + +
Sbjct: 129 IERKAPGVMERKSVSVPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTAIALDTIINQKN 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G++   VR  +E          ++VV A++     +  +AP     + E 
Sbjct: 189 QDVICIYVAIGQKESTVRASVETLRKYGALDYTIVVSASASNPAPMLYIAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  +F    RLLER      + 
Sbjct: 249 FMFNGKDVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G+ P +D   SVSR+  
Sbjct: 309 GGGSMTALPIIQTQAGDVSAYIPTNVISITDGQIFLDSDEFYAGQRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   I  + E   +     +   +D      + +     + LKQ   
Sbjct: 369 DAQIKAMKKVAGTLRLDIASYNE---LASFAQFGSDLDAATQAKLARGQRTMEVLKQGLH 425

Query: 423 DLSSED 428
           D    +
Sbjct: 426 DPLPVE 431


>gi|163732297|ref|ZP_02139743.1| F0F1 ATP synthase subunit alpha [Roseobacter litoralis Och 149]
 gi|161394595|gb|EDQ18918.1| F0F1 ATP synthase subunit alpha [Roseobacter litoralis Och 149]
          Length = 512

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/447 (23%), Positives = 183/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V         P      GRV++ LG PID
Sbjct: 59  --IQGMALNLESDNVGVVIFGSDRDIKEGDTVKRTNSIVSVPTGDELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S+    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAKTSSVA-DVKAPGIIPRKSVHEPMATGLKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
                  +L+  + +D            +   +G++   V + ++       +  S+VV 
Sbjct: 176 TAVALDAILNQKSYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEETGAINYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   ++ +AP +A ++AE+F   G + L++ D +++ A S R+++      P    
Sbjct: 236 ATASEPAPMQFLAPYSATSMAEHFRDNGRHALIVYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER        GN   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLGDAAGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A ++    +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTSAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + + +   + + +KQS     +
Sbjct: 413 DASTQQLLARGARLTELMKQSQYSPLT 439


>gi|152977494|ref|YP_001377011.1| F0F1 ATP synthase subunit alpha [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189081287|sp|A7GV58|ATPA_BACCN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|152026246|gb|ABS24016.1| ATP synthase F1, alpha subunit [Bacillus cytotoxicus NVH 391-98]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFANG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGEELIGRVVNPLGQPVDGLGPIHTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +AP   V+
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|1421799|gb|AAB03873.1| F1-ATPase alpha subunit [Petunia axillaris subsp. parodii]
 gi|1421801|gb|AAB03874.1| F1-ATPase alpha subunit [Petunia axillaris subsp. parodii]
          Length = 509

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 97/441 (21%), Positives = 175/441 (39%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E    N          G + S+      V  L++ +  G+ V      
Sbjct: 3   LSPRAAELTSLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA--- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ LG PID
Sbjct: 59  SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGLPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 178 TAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VAALAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|220932618|ref|YP_002509526.1| ATP synthase F1, alpha subunit [Halothermothrix orenii H 168]
 gi|254808099|sp|B8CZ12|ATPA_HALOH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219993928|gb|ACL70531.1| ATP synthase F1, alpha subunit [Halothermothrix orenii H 168]
          Length = 541

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 99/433 (22%), Positives = 177/433 (40%), Gaps = 20/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + +   +N       V  G +  +      V  L + V   + +      
Sbjct: 1   MNLRPEEISSVIKKQIENYKSELETVSVGTVLDVGDGIAHVYGLDE-VMASELLEFPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V    +G    +  GD V   GR   +       GR++N+LG+P+D
Sbjct: 59  --VYGMALNLEEDSVGCVLLGDETRVKEGDTVKRTGRVVEVPVGEELLGRIVNSLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    + S  P  ++R+ V+   +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGQIS-VDKYRPVESPAPSVVDRKPVDTPLQTGLKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +  D     I   +G++   V +  E          +V+V A++ E   L+
Sbjct: 176 TAIAVDTIINQKDQDVICIYVAIGQKASTVAQIAERLKEHGAMDYTVIVSASASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
            +AP     I EYF  +   +VL++ D +++ A + R ++      P    YP  VF   
Sbjct: 236 YIAPYAGCAIGEYFMYEKNRDVLVVYDDLSKHAVAYRSMSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     ++   G++TA+  +     + +  I  +V SI DG I L   L   G  
Sbjct: 296 SRLLERAARLNEDMGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESELFFAGVR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A +   KK+  +L   + ++ E         +   +D    + + 
Sbjct: 356 PAINVGISVSRVGGAAQTKAMKKVAGTLRLDLSQYRELE---AFAQFGSDLDKATQRRLE 412

Query: 409 QVPIIYDFLKQSP 421
           +   I + LKQ  
Sbjct: 413 RGERIVEVLKQPQ 425


>gi|229164255|ref|ZP_04292188.1| ATP synthase subunit alpha [Bacillus cereus R309803]
 gi|228619195|gb|EEK76088.1| ATP synthase subunit alpha [Bacillus cereus R309803]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|163942995|ref|YP_001647879.1| F0F1 ATP synthase subunit alpha [Bacillus weihenstephanensis KBAB4]
 gi|229014477|ref|ZP_04171595.1| ATP synthase subunit alpha [Bacillus mycoides DSM 2048]
 gi|229064958|ref|ZP_04200256.1| ATP synthase subunit alpha [Bacillus cereus AH603]
 gi|229170015|ref|ZP_04297707.1| ATP synthase subunit alpha [Bacillus cereus AH621]
 gi|226739848|sp|A9VSA5|ATPA_BACWK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|163865192|gb|ABY46251.1| ATP synthase F1, alpha subunit [Bacillus weihenstephanensis KBAB4]
 gi|228613440|gb|EEK70573.1| ATP synthase subunit alpha [Bacillus cereus AH621]
 gi|228716259|gb|EEL67971.1| ATP synthase subunit alpha [Bacillus cereus AH603]
 gi|228746827|gb|EEL96712.1| ATP synthase subunit alpha [Bacillus mycoides DSM 2048]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|294140206|ref|YP_003556184.1| flagellum-specific ATP synthase FliI [Shewanella violacea DSS12]
 gi|293326675|dbj|BAJ01406.1| flagellum-specific ATP synthase FliI [Shewanella violacea DSS12]
          Length = 446

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 157/435 (36%), Positives = 238/435 (54%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  + Q  +     L    G +  +  +    T       +G     +    D + +VI 
Sbjct: 9   LNKIRQQHDKVHPFLAEASGQLIRVVGLTLEATG--CRAPIGSLCSIETLVGDLVAEVIG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + +I+Y+ P+     +  G  V   G    ++      GRV++  G+P+D    L + D
Sbjct: 67  FDDNILYLMPIEELRGVLPGAKVTPLGEQTGLNVGLSLLGRVLDGNGQPLDNLGRL-QTD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 S     + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QKAPRHSPTINPLARRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG+    +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADIIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGP 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHYPAIDVEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  + +  +  +   F++ +D+  IG Y  G D  +D A+   P +  FL+Q   
Sbjct: 366 MVISTEHLESMRRVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQKMK 425

Query: 423 DLSSEDVFQEITKKL 437
           +  S D    +  +L
Sbjct: 426 ESLSFDSCHLMLSQL 440


>gi|290490186|gb|ADD31500.1| ATP synthase CF1 alpha subunit protein [Rhododendron simsii]
          Length = 507

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/429 (24%), Positives = 184/429 (42%), Gaps = 15/429 (3%)

Query: 7   TLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           T+ Q  + Y++ + +V  G +  +      +  L + V  G+ V  +      +G  + +
Sbjct: 12  TIRQRIKQYNRKVKIVNTGTVLKVGDGIARIHGLDE-VMSGELVEFEEG---TIGIALNL 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V    +G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +   + 
Sbjct: 68  ESTNVGAVLMGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALAKPIDGRGEISSSES 127

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +
Sbjct: 128 RL-IESPAPDIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILN 186

Query: 185 DCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTI 241
                VI     +G++   V + +  +        ++VV   +D    L+ +AP T   +
Sbjct: 187 QQGQNVICVYVAIGQKASSVAQVVTTFQEQRAMEYTIVVAEMADSPAALQYLAPYTGAAL 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER     
Sbjct: 247 AEYFMYREQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLS 306

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +    SVSR
Sbjct: 307 SRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAISVGISVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++   L   + +  E         +   +D      + +   + + LKQ
Sbjct: 367 VGSAAQIKAMKQVAGKLKLDLAQLGELE---AFAQFASDIDKGTQNQLARGRRLRELLKQ 423

Query: 420 SPSDLSSED 428
           S S+  + +
Sbjct: 424 SQSEPLTVE 432


>gi|59802445|ref|YP_209157.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae FA 1090]
 gi|239998097|ref|ZP_04718021.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae 35/02]
 gi|240013278|ref|ZP_04720191.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae DGI18]
 gi|240015726|ref|ZP_04722266.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae FA6140]
 gi|240079860|ref|ZP_04724403.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae FA19]
 gi|240112069|ref|ZP_04726559.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae MS11]
 gi|240117017|ref|ZP_04731079.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID1]
 gi|240120350|ref|ZP_04733312.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID24-1]
 gi|240122654|ref|ZP_04735610.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID332]
 gi|240124842|ref|ZP_04737728.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae SK-92-679]
 gi|240127357|ref|ZP_04740018.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae SK-93-1035]
 gi|254492879|ref|ZP_05106050.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae 1291]
 gi|260441371|ref|ZP_05795187.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae DGI2]
 gi|268593949|ref|ZP_06128116.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae 35/02]
 gi|268596005|ref|ZP_06130172.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae FA19]
 gi|268598128|ref|ZP_06132295.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae MS11]
 gi|268602703|ref|ZP_06136870.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID1]
 gi|268681253|ref|ZP_06148115.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID332]
 gi|268683423|ref|ZP_06150285.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae SK-92-679]
 gi|268685730|ref|ZP_06152592.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae SK-93-1035]
 gi|291044728|ref|ZP_06570437.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae DGI2]
 gi|293397827|ref|ZP_06642033.1| ATP synthase F1, alpha subunit [Neisseria gonorrhoeae F62]
 gi|75432314|sp|Q5F4Z2|ATPA_NEIG1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|59719340|gb|AAW90745.1| putative ATP synthase alpha chain [Neisseria gonorrhoeae FA 1090]
 gi|226511919|gb|EEH61264.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae 1291]
 gi|268547338|gb|EEZ42756.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae 35/02]
 gi|268549793|gb|EEZ44812.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae FA19]
 gi|268582259|gb|EEZ46935.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae MS11]
 gi|268586834|gb|EEZ51510.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID1]
 gi|268621537|gb|EEZ53937.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae PID332]
 gi|268623707|gb|EEZ56107.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae SK-92-679]
 gi|268626014|gb|EEZ58414.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae SK-93-1035]
 gi|291011622|gb|EFE03618.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae DGI2]
 gi|291611773|gb|EFF40842.1| ATP synthase F1, alpha subunit [Neisseria gonorrhoeae F62]
          Length = 515

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 191/444 (43%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVSTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + LG  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTLGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  +    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPVEKIAPGVIARKSVDQPMQTGLKAIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|56419757|ref|YP_147075.1| flagellum-specific ATP synthase [Geobacillus kaustophilus HTA426]
 gi|56379599|dbj|BAD75507.1| flagellar-specific ATP synthase [Geobacillus kaustophilus HTA426]
          Length = 422

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 155/424 (36%), Positives = 233/424 (54%), Gaps = 10/424 (2%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVG 76
           +  + G +S +  +            +GD      ++       +V+  +   V + P  
Sbjct: 1   MYKRFGKVSRVIGLMM--ESKGPKSSIGDLCYIHEQSGCRKIPAEVVGFHEQHVLLMPFS 58

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               I+ G LV   GR   +       G V++ LG+P+DG   L  G   + +    P  
Sbjct: 59  AMSHIAPGCLVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-PLPPGLKPVSVERDPPNP 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  + +  + GIRVID    +  GQR+G+FAGSG+GKSTL+ M AR    D  +I+L+
Sbjct: 118 LVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLMGMIARHTSADVNVIALI 177

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+  D   D L +SVVVVATSD+  ++R     TA  IAEYF  +G +V+L
Sbjct: 178 GERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYTATAIAEYFRDQGADVML 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +    G ITA  +VL
Sbjct: 238 MMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNAS--GTITAFYTVL 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SVSR+     SA+ ++  +
Sbjct: 296 VDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSVSRVMPHMISAEHREAAN 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
               L+  + ++ D+  IG Y+ G    +D+A+   P +  F +Q+  + ++  +    +
Sbjct: 356 RFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFCRQNIDEKTTRAESIDAL 415

Query: 434 TKKL 437
            + L
Sbjct: 416 LRLL 419


>gi|134301276|ref|YP_001121244.1| F0F1 ATP synthase subunit alpha [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|158513844|sp|A4IW22|ATPA_FRATW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|134049053|gb|ABO46124.1| ATP synthase F1, alpha subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 513

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKQRIEKFDNSVELKSEGTIVSVADGIVTIYGLND-VAAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCIGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGEV-ATDLTSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAVDTIINQKGTGVKCIYVAIGQKASTIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRAQLNRGQRVTELLKQKQFSTLS 440


>gi|75763710|ref|ZP_00743387.1| ATP synthase alpha chain [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488802|gb|EAO52341.1| ATP synthase alpha chain [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 505

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 13  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 69  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 129 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +AP   VT
Sbjct: 188 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVT 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 308 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 368 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 424

Query: 419 QSPS 422
           Q   
Sbjct: 425 QGLH 428


>gi|149925406|ref|ZP_01913670.1| F0F1 ATP synthase subunit alpha [Limnobacter sp. MED105]
 gi|149825523|gb|EDM84731.1| F0F1 ATP synthase subunit alpha [Limnobacter sp. MED105]
          Length = 513

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 192/443 (43%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S++     V  LS  V  G+ +   G  
Sbjct: 1   MQINPSEISELIKSRIEGLGSSADIRTQGTVVSVSDGICRVHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V +  +G  E IS GD+V   GR   +       GRV+NALG PID
Sbjct: 58  -NTFGLALNLERDSVGVVILGSYEHISEGDMVKCTGRILEVPVGPELRGRVVNALGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    ++  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKMTDVIEKVAPGVIERKSVDQPLQTGVKAIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   VG++   +   +         + ++VVVA++ ES  ++
Sbjct: 176 TAVAIDAIINQKGTGVTCVYVAVGQKASSIVNVLRKLEEHGALEYTIVVVASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTKGEVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    + + +   + + LKQ  
Sbjct: 413 LDEATRRQLERGRRVVELLKQPQ 435


>gi|229076522|ref|ZP_04209482.1| ATP synthase subunit alpha [Bacillus cereus Rock4-18]
 gi|229099740|ref|ZP_04230665.1| ATP synthase subunit alpha [Bacillus cereus Rock3-29]
 gi|229105900|ref|ZP_04236524.1| ATP synthase subunit alpha [Bacillus cereus Rock3-28]
 gi|229118803|ref|ZP_04248152.1| ATP synthase subunit alpha [Bacillus cereus Rock1-3]
 gi|228664604|gb|EEL20097.1| ATP synthase subunit alpha [Bacillus cereus Rock1-3]
 gi|228677474|gb|EEL31727.1| ATP synthase subunit alpha [Bacillus cereus Rock3-28]
 gi|228683629|gb|EEL37582.1| ATP synthase subunit alpha [Bacillus cereus Rock3-29]
 gi|228706555|gb|EEL58768.1| ATP synthase subunit alpha [Bacillus cereus Rock4-18]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|229544396|ref|ZP_04433454.1| ATPase, FliI/YscN family [Bacillus coagulans 36D1]
 gi|229324881|gb|EEN90558.1| ATPase, FliI/YscN family [Bacillus coagulans 36D1]
          Length = 441

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 165/414 (39%), Positives = 235/414 (56%), Gaps = 11/414 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN----LGQVIRINLDIVYICPVGI 77
             G +  +  +   +  L     +GD       N  N    + +V+      V + P   
Sbjct: 18  HYGKVKRVIGLM--IESLGPESSIGDVCYIHVDNKKNTKKIIAEVVGFRDGNVILMPYTN 75

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            +EIS G LV   G+  R+       G+VI+ LG P+D    L  G   + I    P  +
Sbjct: 76  IQEISPGSLVEATGKPMRVKAGPRLLGKVIDPLGVPLDHS-PLPAGLKPIPIDRTPPNPL 134

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  + +  + G+R ID    +  GQRIG+FAGSG+GKSTLL M AR+   D  +I+L+G
Sbjct: 135 KRPPIREPIELGVRAIDSLLTVGKGQRIGIFAGSGVGKSTLLGMIARNTNADLNVIALIG 194

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFI +D   + LKKS+VVVATSD+  ++R     TA  IAEYF  +G NV+ +
Sbjct: 195 ERGREVREFIEQDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAIAEYFRDQGLNVMFM 254

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR A + RE+   +GE P  +GY  SVF+ LP+LLER G +E   G IT + +VLV
Sbjct: 255 MDSVTRVAMAQREVGLATGEPPATKGYTPSVFAILPKLLERTGTNES--GTITGIYTVLV 312

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGH VL+R LA +G+YP ++ L SVSRL  +  S   KK    
Sbjct: 313 DGDDLNEPIADTVRGILDGHFVLDRDLANKGQYPAINILKSVSRLMSQLASPAHKKAAEK 372

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           +   +  +  + D+  IG Y+PG    +D+A+ + P I  F+KQS  +  S + 
Sbjct: 373 IREQLSTYLNSEDLINIGAYKPGASKEIDEAIERYPKIVSFIKQSTDETYSMES 426


>gi|55824804|gb|AAV66484.1| F1-ATPase alpha subunit [Strobilanthes dyeriana]
          Length = 413

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++G  V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKGSTVAQLVKILEEANALEYSILVAATASDPAPLQYLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|55824818|gb|AAV66491.1| F1-ATPase alpha subunit [Bartsia inaequalis]
          Length = 410

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|114216208|gb|ABI54715.1| ATPase alpha subunit [Huperzia selago]
          Length = 406

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 173/412 (41%), Gaps = 23/412 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 3   GRVVSVGDGIARVYGLNK-IQAGELVEFA---SGVKGMALNLENENVGIVIFGSDTAIKE 58

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD+V   G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 59  GDIVKRTGSIVDVPVGKAMLGRVVDALGIPIDGKGALNAVE-RRRVEVKAPGIIARKSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVI 191
           +  +TG++ +D   P+  GQR  +      GK      T+L+    +            +
Sbjct: 118 EPMQTGLKAVDSPVPIGRGQRELIIGDRQTGKTAIAIDTILNQKRINAQGTSESEKLYCV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++        + SV+V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 178 YVAIGQKRSTVAQLVKILSEAGALEYSVIVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ + + R+++      P    +P  VF    RLLER          G++T
Sbjct: 238 HALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYPHSRLLERAAKMSDRTGAGSLT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 298 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQLKA 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ 
Sbjct: 358 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQYLLNRGARLTEVLKQP 406


>gi|282767710|gb|ADA85891.1| ATPase alpha subunit [Allium cepa]
          Length = 506

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 99/436 (22%), Positives = 176/436 (40%), Gaps = 25/436 (5%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-- 174
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK  
Sbjct: 121 GALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 175 ---STLLSMFARSDCFD----KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227
               T+L+    ++  +      +   +G++   V +F++  +  N   S++V AT+ + 
Sbjct: 180 IAIDTILNQKQMNESSESETLYCVYVAIGQKRSTVAQFVQILIEANALDSILVAATASDP 239

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF     + L+I D +++ A + R+++      P    +P  VF
Sbjct: 240 APLQFLAPYSGCAMGEYFRDNSMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 299

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V  I DG I     L   
Sbjct: 300 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYR 359

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D     
Sbjct: 360 GIRPAINVGLSVSRVGSAAQLKTMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQA 416

Query: 406 AVHQVPIIYDFLKQSP 421
             ++   + +  KQ  
Sbjct: 417 LPNRGARLTEVPKQPQ 432


>gi|15925095|ref|NP_372629.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927679|ref|NP_375212.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus N315]
 gi|21283758|ref|NP_646846.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MW2]
 gi|49484329|ref|YP_041553.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49486898|ref|YP_044119.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87160882|ref|YP_494706.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196009|ref|YP_500822.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268556|ref|YP_001247499.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394620|ref|YP_001317295.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980420|ref|YP_001442679.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161510312|ref|YP_001575971.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141624|ref|ZP_03566117.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253731057|ref|ZP_04865222.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733061|ref|ZP_04867226.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006893|ref|ZP_05145494.2| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257426244|ref|ZP_05602659.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428902|ref|ZP_05605296.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431511|ref|ZP_05607884.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257434220|ref|ZP_05610570.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257437133|ref|ZP_05613173.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257793863|ref|ZP_05642842.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9781]
 gi|258422053|ref|ZP_05684970.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9719]
 gi|258422895|ref|ZP_05685795.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9635]
 gi|258433578|ref|ZP_05688651.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9299]
 gi|258440473|ref|ZP_05690643.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A8115]
 gi|258445681|ref|ZP_05693859.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6300]
 gi|258450135|ref|ZP_05698230.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6224]
 gi|258453185|ref|ZP_05701176.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A5948]
 gi|258453410|ref|ZP_05701392.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A5937]
 gi|262049272|ref|ZP_06022147.1| ATP synthase subunit A [Staphylococcus aureus D30]
 gi|262052608|ref|ZP_06024802.1| ATP synthase subunit A [Staphylococcus aureus 930918-3]
 gi|269203741|ref|YP_003283010.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894749|ref|ZP_06302975.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A8117]
 gi|282904774|ref|ZP_06312648.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906449|ref|ZP_06314300.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909418|ref|ZP_06317233.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911670|ref|ZP_06319469.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914954|ref|ZP_06322734.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917454|ref|ZP_06325207.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920283|ref|ZP_06328007.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923093|ref|ZP_06330778.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9765]
 gi|282925494|ref|ZP_06333148.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282929029|ref|ZP_06336614.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A10102]
 gi|283771273|ref|ZP_06344162.1| atpA ATP synthase CF1 alpha subunit [Staphylococcus aureus subsp.
           aureus H19]
 gi|283958885|ref|ZP_06376330.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284025139|ref|ZP_06379537.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 132]
 gi|293509022|ref|ZP_06667809.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510937|ref|ZP_06669636.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547539|ref|ZP_06672214.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294850075|ref|ZP_06790812.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|295407035|ref|ZP_06816837.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295428692|ref|ZP_06821318.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296275416|ref|ZP_06857923.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297210074|ref|ZP_06926467.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246034|ref|ZP_06929891.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297589828|ref|ZP_06948468.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|300910437|ref|ZP_07127889.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304379286|ref|ZP_07362025.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54036783|sp|P63676|ATPA_STAAW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|54036793|sp|P99111|ATPA_STAAN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|54040853|sp|P63675|ATPA_STAAM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|60389597|sp|Q6G7K5|ATPA_STAAS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|60389622|sp|Q6GEX0|ATPA_STAAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119367964|sp|Q2FWE8|ATPA_STAA8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007214|sp|Q2FF22|ATPA_STAA3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201682|sp|A7X4U5|ATPA_STAA1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081321|sp|A6U3J0|ATPA_STAA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081322|sp|A5IUQ0|ATPA_STAA9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081323|sp|A8YY72|ATPA_STAAT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|13701899|dbj|BAB43191.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus N315]
 gi|14247878|dbj|BAB58267.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205200|dbj|BAB95894.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus MW2]
 gi|49242458|emb|CAG41174.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245341|emb|CAG43816.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|87126856|gb|ABD21370.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203567|gb|ABD31377.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741625|gb|ABQ49923.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947072|gb|ABR53008.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156722555|dbj|BAF78972.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369121|gb|ABX30092.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating
           F-type ATPase epsilon alpha subunit [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253725184|gb|EES93913.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728969|gb|EES97698.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257270949|gb|EEV03122.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257274244|gb|EEV05761.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257277752|gb|EEV08422.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257280859|gb|EEV11004.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257283526|gb|EEV13653.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257787835|gb|EEV26175.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9781]
 gi|257841953|gb|EEV66385.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9719]
 gi|257846919|gb|EEV70933.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9635]
 gi|257849309|gb|EEV73288.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9299]
 gi|257852542|gb|EEV76460.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A8115]
 gi|257855520|gb|EEV78457.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6300]
 gi|257856609|gb|EEV79515.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A6224]
 gi|257859131|gb|EEV81988.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A5948]
 gi|257864391|gb|EEV87137.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A5937]
 gi|259159478|gb|EEW44528.1| ATP synthase subunit A [Staphylococcus aureus 930918-3]
 gi|259162637|gb|EEW47204.1| ATP synthase subunit A [Staphylococcus aureus D30]
 gi|262076031|gb|ACY12004.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus ED98]
 gi|269941704|emb|CBI50111.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus TW20]
 gi|282312895|gb|EFB43296.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316143|gb|EFB46524.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318656|gb|EFB49013.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321157|gb|EFB51488.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324435|gb|EFB54748.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326688|gb|EFB56986.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330399|gb|EFB59917.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282589335|gb|EFB94427.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A10102]
 gi|282593284|gb|EFB98281.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A9765]
 gi|282594807|gb|EFB99784.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282762837|gb|EFC02971.1| ATP synthase F1, alpha subunit [Staphylococcus aureus A8117]
 gi|283459478|gb|EFC06571.1| atpA ATP synthase CF1 alpha subunit [Staphylococcus aureus subsp.
           aureus H19]
 gi|283471322|emb|CAQ50533.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283789603|gb|EFC28426.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817769|gb|ADC38256.1| ATP synthase alpha chain [Staphylococcus aureus 04-02981]
 gi|290919659|gb|EFD96732.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094726|gb|EFE24998.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466222|gb|EFF08749.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|294823023|gb|EFG39455.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|294968060|gb|EFG44087.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295127362|gb|EFG57002.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296885274|gb|EFH24214.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177033|gb|EFH36288.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297576956|gb|EFH95670.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695379|gb|ADI98601.1| ATP synthase alpha chain [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300888279|gb|EFK83470.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302333751|gb|ADL23944.1| ATP synthase subunit alpha, AtpA [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751986|gb|ADL66163.1| ATP synthase subunit alpha, AtpA [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342145|gb|EFM08045.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312437477|gb|ADQ76548.1| ATP synthase F1 sector alpha subunit [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312830457|emb|CBX35299.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128776|gb|EFT84776.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315193270|gb|EFU23668.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315196961|gb|EFU27303.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140723|gb|EFW32575.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143699|gb|EFW35476.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323439346|gb|EGA97070.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus O11]
 gi|323442445|gb|EGB00074.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus O46]
 gi|329314790|gb|AEB89203.1| ATP synthase subunit alpha [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329724003|gb|EGG60527.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726305|gb|EGG62773.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729266|gb|EGG65674.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           21193]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G    I+ GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTASKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|118442915|ref|YP_877978.1| flagellum-specific ATP synthase [Clostridium novyi NT]
 gi|118133371|gb|ABK60415.1| flagellum-specific ATP synthase [Clostridium novyi NT]
          Length = 438

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 168/440 (38%), Positives = 246/440 (55%), Gaps = 13/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           ++ N E +         +     G +  +  +   V  +  +V  G+      K N   +
Sbjct: 3   IEINFENIKNKI--AKCDFKYTEGLVKQVIGLTIEVEGIKAFV--GEVCTIYNKENEPIM 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D V + P+G    I  G  V    +   +  S    G+V+N LGKP+  ++ 
Sbjct: 59  CEVVGFKEDNVILMPLGELIGIGPGCKVVPSKKYLSVKCSDDLLGKVLNGLGKPLKSEEE 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G +   + +  P  + R+R++    TG+R +D F     GQRIG+FAGSG+GKST L
Sbjct: 119 LPIG-VDYPLDTAPPDPLKRRRIKDEIATGVRAVDGFLTCGEGQRIGIFAGSGVGKSTTL 177

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREV +FI +D   + LKKSV+V ATSD+  ++R     T
Sbjct: 178 GMIAREAKADINVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFT 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LPRL+ER 
Sbjct: 238 ATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERS 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S+K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D L SV
Sbjct: 298 GMSDK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDILNSV 355

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL  +  + + KK  S    L+  ++ + D+  IG Y  G +  +D A+     + D+L
Sbjct: 356 SRLMSEIATDEHKKAASLARDLLATYKNSEDLINIGAYVRGSNPKVDMAIQYNDELNDYL 415

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q   + S    FQE   +L
Sbjct: 416 RQGIKEHSE---FQESVTRL 432


>gi|149183572|ref|ZP_01861994.1| F0F1 ATP synthase subunit alpha [Bacillus sp. SG-1]
 gi|148848713|gb|EDL62941.1| F0F1 ATP synthase subunit alpha [Bacillus sp. SG-1]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 109/433 (25%), Positives = 180/433 (41%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N      V   G +  I         L   V  G+ V      
Sbjct: 1   MSIKAEEISALIKKQIENYQSEMKVSDVGTVIQIGDGIARAHGL-DNVMAGELVEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +  + V I  +G   +I  GD V   GR   +       GRV+N+LG+P+D
Sbjct: 59  --VMGMAQNLEENNVGIVILGPYRDIKEGDEVRRTGRIMEVPVGEELIGRVVNSLGQPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I SK    M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GLGPINATK-TRPIESKATGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +   + ++  + D     I   +G++   VR  +E          ++VV A++ +   + 
Sbjct: 176 TSVAIDTILNQKDQDMVCIYVAIGQKESTVRNAVETLRKHGALDYTIVVTASASQPAPML 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VT+ E F   G +VL++ D +++ A + RE++      P    +P  VF    
Sbjct: 236 FLAPYAGVTMGEEFMFNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      EKG  +ITA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDEKGAGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E         +   +D      +++
Sbjct: 356 AINAGLSVSRVGGSAQIKAMKKVSGTLRLDLAAYRELE---AFAQFGSDLDKATQAKLNR 412

Query: 410 VPIIYDFLKQSPS 422
                + LKQ  +
Sbjct: 413 GARTVEVLKQDLN 425


>gi|229033939|ref|ZP_04188893.1| ATP synthase subunit alpha [Bacillus cereus AH1271]
 gi|228728365|gb|EEL79387.1| ATP synthase subunit alpha [Bacillus cereus AH1271]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|150251443|ref|YP_001312176.1| ATP synthase CF1 alpha chain [Cycas taitungensis]
 gi|190358170|sp|A6H5F1|ATPA_CYCTA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|149941493|dbj|BAF64917.1| ATP synthase CF1 alpha chain [Cycas taitungensis]
          Length = 507

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y++ + VV  G +  +      +  L + V  G+ V  +      +G  + 
Sbjct: 11  SIIRKQIKQYNQEVEVVNIGIVLQVGDGIARIHGLDE-VMAGELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESNNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYSGRVVNALAQPIDGRGKITASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 -SRSIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQKASSVAQVVNIFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKEQHTLIIYDDLSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDRATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|71149406|gb|AAZ29198.1| ATP synthase subunit A [Pellia epiphylla]
          Length = 514

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 95/430 (22%), Positives = 171/430 (39%), Gaps = 23/430 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V   S  +  G+ V      S   G  + + 
Sbjct: 13  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYG-SNKIQAGEMVE---SASGVKGMALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +L      
Sbjct: 69  NENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALLSAVER 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 129 RRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTISNQ 188

Query: 186 CFD-----------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
                           +   +G++   V + ++        + S++V AT+ +    + +
Sbjct: 189 KQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKIPSEAGASEYSIIVAATASDPAPPQFL 248

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF   G + L+I D +++ + + R+++      P    +P  VF    RL
Sbjct: 249 APYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRL 308

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            ER      +   G++TA   +     + +  I  +V SI DG I L       G  P +
Sbjct: 309 SERAAKMSDQTGAGSLTAPPVIETQAGDVSAYIPTNVISITDGQIFLETEPFYRGSRPAI 368

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  SL   + ++ E   +     +   +D       ++  
Sbjct: 369 NVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQYLSNRGA 425

Query: 412 IIYDFLKQSP 421
            + + LKQ  
Sbjct: 426 RLTEILKQPQ 435


>gi|15429015|gb|AAK98045.1|AF301602_1 ATP1 [Daucus carota]
 gi|15429018|gb|AAK98046.1|AF301604_1 ATP1 [Daucus carota]
          Length = 513

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 175/439 (39%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    +          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRISHFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPSREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVPKQPQ 435


>gi|218900433|ref|YP_002448844.1| ATP synthase F1, alpha subunit [Bacillus cereus G9842]
 gi|228903781|ref|ZP_04067898.1| ATP synthase subunit alpha [Bacillus thuringiensis IBL 4222]
 gi|228911146|ref|ZP_04074952.1| ATP synthase subunit alpha [Bacillus thuringiensis IBL 200]
 gi|228924043|ref|ZP_04087319.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228942454|ref|ZP_04104991.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228968434|ref|ZP_04129424.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228975386|ref|ZP_04135942.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982023|ref|ZP_04142316.1| ATP synthase subunit alpha [Bacillus thuringiensis Bt407]
 gi|226739845|sp|B7IQW0|ATPA_BACC2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|218543853|gb|ACK96247.1| ATP synthase F1, alpha subunit [Bacillus cereus G9842]
 gi|228777687|gb|EEM25961.1| ATP synthase subunit alpha [Bacillus thuringiensis Bt407]
 gi|228784368|gb|EEM32391.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228791250|gb|EEM38862.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228817196|gb|EEM63284.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228835533|gb|EEM80898.1| ATP synthase subunit alpha [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228848509|gb|EEM93357.1| ATP synthase subunit alpha [Bacillus thuringiensis IBL 200]
 gi|228855870|gb|EEN00413.1| ATP synthase subunit alpha [Bacillus thuringiensis IBL 4222]
 gi|326943105|gb|AEA19001.1| F0F1 ATP synthase subunit alpha [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 502

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|17549091|ref|NP_522431.1| type III secretion system ATPase [Ralstonia solanacearum GMI1000]
 gi|17431342|emb|CAD18021.1| hrp conserved protein hrcn [Ralstonia solanacearum GMI1000]
 gi|219566960|dbj|BAH04991.1| type III secretion system ATPase [Ralstonia solanacearum]
          Length = 439

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 158/437 (36%), Positives = 237/437 (54%), Gaps = 11/437 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQV 62
           L++L   A   +  L+ + G +  +T     V  +   V LG+       +   +  G+V
Sbjct: 7   LDSLESAA--RTTPLIRRFGKVVEVTGTLLRVGGVD--VRLGELCTLTEADGTVMQEGEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  +     + P      +S    V   GR   +       GRV++ LG+P DG   L  
Sbjct: 63  VGFSEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPPLDV 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            +  + + +  P  M R+ VE    TG+RVID    L  GQR+G+FA +G+GKSTL+ MF
Sbjct: 123 VEY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMF 181

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I L+GERGREVREFI +    + +++SVVV ATSD S + R  A      
Sbjct: 182 ARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAYVGTA 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G S
Sbjct: 242 VAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMS 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L S+SR+
Sbjct: 302 A--AGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRV 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    D       +  L+ ++ E   +  +G Y+ G D + D AV     +  FL+Q 
Sbjct: 360 MTQVMPRDHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMESFLRQR 419

Query: 421 PSDLSSEDVFQEITKKL 437
             +  S D  + +  ++
Sbjct: 420 TDEWCSPDETRRLLDEI 436


>gi|99081928|ref|YP_614082.1| F0F1 ATP synthase subunit alpha [Ruegeria sp. TM1040]
 gi|118573491|sp|Q1GEU6|ATPA_SILST RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|99038208|gb|ABF64820.1| ATP synthase F1 alpha subunit [Ruegeria sp. TM1040]
          Length = 513

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 183/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLESDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGPELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIEAKERKVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
                 T+L+  + +D            +   VG++   V + ++          S+VV 
Sbjct: 176 TAIALDTILNQKSYNDAAGDDDSKKLYCVYVAVGQKRSTVAQLVKKLEESGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEYFRDSGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTDAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + + +   + + +KQ      +
Sbjct: 413 DAATQQLLARGARLTELMKQPQYSPLT 439


>gi|289663768|ref|ZP_06485349.1| type III secretion system ATPase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 442

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 164/443 (37%), Positives = 246/443 (55%), Gaps = 14/443 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           M+  +  L    E     L    + G +  +      V  +   V LG+    + ++   
Sbjct: 1   MRAEMSLLETALEGELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTL 58

Query: 59  L--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
           L   +V+  + D+  + P G    +S    V   GR   +       GRV++ LG+P DG
Sbjct: 59  LQRAEVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPADG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++ + +  + + ++ P  M R+ +E+   TG+R++D    L  GQR+G+FA +G+GKS
Sbjct: 119 LGAV-ECETWVRVQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TL+ MFAR    D  +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A
Sbjct: 178 TLMGMFARGTQCDVNVIVLIGERGREVREFIEMILGEDGLSRSVVVCATSDRSSIERAKA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLL
Sbjct: 238 AYVGTAIAEYFRDQGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLL 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G  E   G+ITA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D L
Sbjct: 298 ERAGMGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVL 355

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S+SR+  +    ++ +    L  L+ ++ +   +  +G YR G D   D+A+ ++  I 
Sbjct: 356 GSLSRVMSQIVPPEQSQAAGQLRRLLAKYNDVETLLQVGEYREGSDATADEAIARIDAIR 415

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           DFL Q    LS    ++   ++L
Sbjct: 416 DFLCQPTDQLSG---YESTLEQL 435


>gi|110680695|ref|YP_683702.1| F0F1 ATP synthase subunit alpha [Roseobacter denitrificans OCh 114]
 gi|118573488|sp|Q162S7|ATPA_ROSDO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|109456811|gb|ABG33016.1| ATP synthase F1, alpha subunit [Roseobacter denitrificans OCh 114]
          Length = 512

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 182/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V         P      GRV++ LG PID
Sbjct: 59  --IQGMALNLESDNVGVVIFGSDRDIKEGDTVKRTNSIVSVPTGDELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +     K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTKTTSVADVKAPGIIPRKSVHEPMATGLKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
                  +L+  + +D            +   +G++   V + ++       +  S+VV 
Sbjct: 176 TAVALDAILNQKSYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEETGAINYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   ++ +AP +A  +AE+F   G + L++ D +++ A S R+++      P    
Sbjct: 236 ATASEPAPMQFLAPYSATAMAEHFRDNGRHALIVYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      + GN   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLGDDAGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A ++    +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTSAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + + +   + + +KQ      +
Sbjct: 413 DASTQQLLARGARLTELMKQPQYSPLT 439


>gi|313673741|ref|YP_004051852.1| type iii secretion system atpase, flii/yscn [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940497|gb|ADR19689.1| type III secretion system ATPase, FliI/YscN [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 434

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 160/436 (36%), Positives = 252/436 (57%), Gaps = 9/436 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIR 64
           ++L  +      + +   G ++ I     T+      + +G   + +  + +  L ++I 
Sbjct: 2   KSLELIKRIKLSDQLTIYGKVTKIVG--LTIEADGPLLGIGTRCLIENGSRNGILAEIIG 59

Query: 65  INLDIVYICPVGIGEEISLGDLVFH--WGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
              D + + P G  E I+ G  V +  +G   +  +    GR+++ LG PID    +   
Sbjct: 60  FKDDRIVLMPYGESEGIAPGSRVRNVSYGN-SVKVTEKLLGRILDGLGNPIDDKGPITDF 118

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +L   + ++ P  + R+ ++    TG++ ID    + +GQR+G+FAGSG+GKS LL M A
Sbjct: 119 EL-WPVYNEPPKPLEREIIKDVIPTGVKAIDGLITVGNGQRVGIFAGSGVGKSVLLGMIA 177

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   +  +I+L+GERGREVREFI  D   + LK+SV+VVATSD+SP++RK+    A TI
Sbjct: 178 RNTSAEVNVIALIGERGREVREFIERDLGEEGLKRSVIVVATSDQSPLVRKLGAFVATTI 237

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF S G NV+ ++DS+TRFA + REI    GE P ++GY  SVF+ LP+LLER G ++
Sbjct: 238 AEYFRSTGKNVMFMMDSVTRFAMAQREIGLTVGEPPTSKGYTPSVFALLPKLLERAG-TK 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K +G +T + +VLV+GD+  DPIADSVRSI+DGHIVL+R LA    +P +D L S SRL 
Sbjct: 297 KGEGAVTGLYTVLVEGDDLTDPIADSVRSIIDGHIVLSRLLAARNHFPAIDVLMSASRLM 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  + +  +L   +  L+  + E  D+  IG Y  G +  +D A+ ++  I  FL+Q  
Sbjct: 357 KEIVTDEHFRLAGMMRDLMAAYNEAEDLINIGAYAKGSNKRIDTAIAKIDAINSFLRQGI 416

Query: 422 SDLSSEDVFQEITKKL 437
            +        E+ KK+
Sbjct: 417 DEKFDFTTTYELIKKI 432


>gi|330719817|gb|EGG98317.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC2047]
          Length = 447

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 246/426 (57%), Gaps = 7/426 (1%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
             L + +E   + +  V  G ++ I     T+  +   V LGD       N  ++  +V+
Sbjct: 7   SRLNRFSERIPERVDPVVEGRLTRIVG--LTLEAVGCNVALGDHCEIDMANGRHIEAEVV 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
               + V++ P+G  E I  G  V    R + +       GRV+N +G+P+D    L + 
Sbjct: 65  GFADNRVFLMPLGPVEGIRPGARVRPVQRSKEVPVGYGLLGRVLNGVGEPLDDKGPL-QA 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  +    ++R  + +    GIR I+    +  GQR+G+FAGSG+GKS LL M  
Sbjct: 124 DAKTGLEGQYINPLSRNPIHESLDVGIRAINALLTVGRGQRLGLFAGSGVGKSVLLGMMT 183

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ LVGERGREV+EFI+D LG   L ++VVV + +D+SP++R  + +   +I
Sbjct: 184 RFTEADIVVVGLVGERGREVKEFIDDCLGPAGLARAVVVASPADDSPLMRLRSAMLTTSI 243

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G NVLL++DS+TR+A + RE+A   GE P  +GYP SVF++LP+L+ER G + 
Sbjct: 244 AEYFRDQGKNVLLLMDSLTRYAQAQRELALAVGEPPATKGYPPSVFAKLPQLVERAGNAA 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+ITA  +VL +GD+  DP+AD+ R+ILDGHIVL+R LAE G YP +D  ASVSR+ 
Sbjct: 304 AGEGSITAFYTVLTEGDDQQDPVADAARAILDGHIVLSRRLAEAGHYPAIDVEASVSRVM 363

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  + ++ +L      +   ++++ D+  +G Y  G +   D A+ ++P++  FL+Q  
Sbjct: 364 PQVVNPEQMQLAQQFRQVYANYQQSSDLISVGAYVAGSNPETDFAIQRMPVMKQFLQQGL 423

Query: 422 SDLSSE 427
           ++    
Sbjct: 424 NEAVDY 429


>gi|254670873|emb|CBA07372.1| ATP synthase F1, alpha subunit [Neisseria meningitidis alpha153]
          Length = 515

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|239637398|ref|ZP_04678380.1| ATP synthase F1, alpha subunit [Staphylococcus warneri L37603]
 gi|239596998|gb|EEQ79513.1| ATP synthase F1, alpha subunit [Staphylococcus warneri L37603]
          Length = 502

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V  Q      LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFQNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   EIS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYTEISEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   VR  +E          ++VV A++ E   L  +AP   VT
Sbjct: 185 NQKTEDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTARKLERGKRTVEILK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|303245587|ref|ZP_07331870.1| ATP synthase F1, alpha subunit [Desulfovibrio fructosovorans JJ]
 gi|302492850|gb|EFL52715.1| ATP synthase F1, alpha subunit [Desulfovibrio fructosovorans JJ]
          Length = 502

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 171/407 (42%), Gaps = 14/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  + +     + +   G     +G V+ +  D V +  +G    
Sbjct: 26  SETGTVLSVGDQIARVYGV-KNAMAMELLEFPGG---VMGLVLNLEEDNVGVALLGEDTH 81

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GD V   G+   +       GRVI+ LG PIDG   +   + + E+  K P  + R+
Sbjct: 82  IKEGDPVKRTGKIFSVPVGEAVAGRVIDPLGNPIDGLGPIDAKE-TREVEIKAPGIIARK 140

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGE 197
            V +   TG++ ID  TP+  GQR  +      GK+ +   ++ A+           +G+
Sbjct: 141 SVHQPMYTGLKAIDAMTPIGRGQRELIIGDRQTGKTAVCLDAILAQKGQGVYCFYVAIGQ 200

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V    E          + ++ AT+ E   L+ +A  +  T+AEY      + L+I 
Sbjct: 201 KKSTVALVAETLRRYGAMEYTTIISATASEPASLQYIAAYSGCTMAEYHRDSSRHALIIY 260

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    YP  VF    RLLER      +   G++TA+  + 
Sbjct: 261 DDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDKLGAGSLTALPIIE 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG + L  +L   G  P ++   SVSR+   A     K++  
Sbjct: 321 TQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRPAINVGLSVSRVGGAAQVKAMKQVAG 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +L   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 381 TLRLDLAQYRE---LAAFAQFGSDLDKATQLKLNRGVRMVELLKQPQ 424


>gi|289550279|ref|YP_003471183.1| ATP synthase alpha chain [Staphylococcus lugdunensis HKU09-01]
 gi|315660261|ref|ZP_07913116.1| ATP synthase F1 sector alpha subunit [Staphylococcus lugdunensis
           M23590]
 gi|289179811|gb|ADC87056.1| ATP synthase alpha chain [Staphylococcus lugdunensis HKU09-01]
 gi|315494688|gb|EFU83028.1| ATP synthase F1 sector alpha subunit [Staphylococcus lugdunensis
           M23590]
          Length = 502

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V  Q      LG    
Sbjct: 10  ALLRSQIENYESEVSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFQNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   +I+ GD V   GR   +       GRV+N LG+PIDG   +   D
Sbjct: 66  LEESNVGVVILGPYTDITEGDEVKRTGRIMEVPVGDELIGRVVNPLGQPIDGQGPVN-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 125 KTRPVEQKATGVMDRKSVDEPLQTGIKAIDALVPIGKGQRELIIGDRQTGKTTIAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          +++V A++ E   L  +AP + V 
Sbjct: 185 NQKGQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIIVSASAAEPAPLLYIAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKDVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDTLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTARKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|170592445|ref|XP_001900975.1| ATP synthase alpha chain, mitochondrial precursor [Brugia malayi]
 gi|158591042|gb|EDP29655.1| ATP synthase alpha chain, mitochondrial precursor, putative [Brugia
           malayi]
          Length = 536

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 177/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V          G  + +  D V +   G  + I
Sbjct: 53  ETGKVLSIGDGIARVYGL-KNIQAEEMVEFDCGMK---GMALNLEPDNVGVVVFGNDKVI 108

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +   + S  +  K P  + R  
Sbjct: 109 REGDVVKRTGAIVDVPVGEALLGRVVDALGNPIDGKGPIKCTERSR-VGVKAPGIIPRIG 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TG++ +D   P+  GQR  +      GK      T+++    ++  D       
Sbjct: 168 VREPMLTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNEGSDEKKKLYC 227

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++       +K +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 228 IYVAIGQKRSTVAQIVKRLTDTGAIKYTIIVSATASDAAPLQYLAPYSGCAVGEYFRDHG 287

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 288 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSHGGGSL 347

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 348 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 407

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 408 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 458


>gi|291276665|ref|YP_003516437.1| ATP synthase F1 sector subunit alpha [Helicobacter mustelae 12198]
 gi|290963859|emb|CBG39695.1| ATP synthase F1 sector alpha subunit [Helicobacter mustelae 12198]
          Length = 503

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/431 (23%), Positives = 184/431 (42%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   E ++ + ++  +N      + Q G + +       V  +   +   + V     + 
Sbjct: 3   KLKPEEISDIIKERIQNFNVEVDIAQTGKVIAYADGVAKVYGIQDVMSY-EMVEFDTGDK 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G    +    V +  +G G+ I  G  V   G+  R+       GRVIN LG+P+DG
Sbjct: 62  ---GLASNLEEGSVGVIVLGSGKNIREGTSVKRLGKLMRVPVGEGVVGRVINVLGEPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +    +  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGPIEASEYCF-VEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +        I   +G++   V + +           +VVV A++ ES  ++ 
Sbjct: 178 TVAVDTIINQKGQGVVCIYVAIGQKESTVAQVVRKLEEHGAMEYTVVVNASAAESSAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T VTI EYF     + L+I D +++ A + RE++      P    +P  VF    R
Sbjct: 238 LAPYTGVTIGEYFRDHAKHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSR 297

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +KG  ++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 298 LLERAAKVSDDKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFSGIRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D +  + + + 
Sbjct: 358 INVGLSVSRVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFAQFASDLDEVSRRQLDRG 414

Query: 411 PIIYDFLKQSP 421
             + + LKQ P
Sbjct: 415 QRMVEVLKQGP 425


>gi|157829069|ref|YP_001495311.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166201676|sp|A8GTS8|ATPA_RICRS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358298|sp|B0BVB8|ATPA_RICRO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157801550|gb|ABV76803.1| F0F1 ATP synthase subunit alpha [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 510

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 187/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V +  +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVGVVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 417

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+  +    E+    I
Sbjct: 418 IDHGKRLVEILKQAQYNPFPVEEQIVSI 445


>gi|229175981|ref|ZP_04303477.1| ATP synthase subunit alpha [Bacillus cereus MM3]
 gi|228607474|gb|EEK64800.1| ATP synthase subunit alpha [Bacillus cereus MM3]
          Length = 502

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +A    VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLYLAAYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|255530310|ref|YP_003090682.1| F0F1 ATP synthase subunit alpha [Pedobacter heparinus DSM 2366]
 gi|255343294|gb|ACU02620.1| ATP synthase F1, alpha subunit [Pedobacter heparinus DSM 2366]
          Length = 524

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 107/442 (24%), Positives = 172/442 (38%), Gaps = 36/442 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   S+  + + G +  +      V  L++ V  G+ V  +       G V+ +  D 
Sbjct: 16  QLAGFKSEAELEEVGTVLQVGDGIARVYGLTK-VQSGELVEFETG---LQGIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  + I  GD +    +   I       GRV+N LG+PIDG   +      M I
Sbjct: 72  VGVVLLGPSDTIKEGDTIKRTKKIASIKVGEGMLGRVVNTLGEPIDGKGPIIGETYEMPI 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  + RQ V +  +TGI+ ID   P+  GQR  V     IGK+ +      +    
Sbjct: 132 ERKAPGVIYRQPVTEPLQTGIKAIDGMIPIGRGQRELVIGDRQIGKTAVCIDTIINQKEF 191

Query: 189 K-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I    G++   V   +     +     +VVV A++ E   L+  AP +   
Sbjct: 192 YEAGNPVFCIYVACGQKASTVANIVRTLEENGAMPYTVVVAASAAEPAPLQFYAPFSGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E+F   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEFFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKI 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 NSNDEIAQAMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +D
Sbjct: 372 NLFNSGIRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELE---AFSKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
                 + +     + LKQ   
Sbjct: 429 AATKSVLDKGARNVEILKQGQF 450


>gi|159106861|ref|YP_001531280.1| ATP synthase CF1 alpha subunit [Lolium perenne]
 gi|190358183|sp|A8Y9G7|ATPA_LOLPR RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|158934395|emb|CAO85973.1| ATP synthase CF1 alpha subunit [Lolium perenne]
          Length = 507

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 188/437 (43%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGKGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +     VI     +G+R   V + + ++  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQNVICVYVAIGQRASSVAQVVTNFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|55976888|gb|AAV68293.1| F1-ATPase alpha subunit [Rafflesia pricei]
          Length = 419

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-MKAGEMVEFA---SGVKGIALNLEKENVGIVFFGSETAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG P+DG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPLDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIFNQKQMNSKATSESETLSCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVKIMEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +H+   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLHRGARLTEVLKQPQ 406


>gi|6561625|gb|AAF16969.1|AF197637_1 ATPase alpha subunit [Didymeles perrieri]
          Length = 421

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 173/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGASESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAKLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDPATQALLNRGARLTEVLKQPQYEP 409


>gi|227552047|ref|ZP_03982096.1| ATP synthase subunit alpha [Enterococcus faecium TX1330]
 gi|257882705|ref|ZP_05662358.1| ATP synthase F1 [Enterococcus faecium 1,231,502]
 gi|257886791|ref|ZP_05666444.1| ATP synthase F1 [Enterococcus faecium 1,141,733]
 gi|257895359|ref|ZP_05675012.1| ATP synthase F1 [Enterococcus faecium Com12]
 gi|257897971|ref|ZP_05677624.1| ATP synthase F1 [Enterococcus faecium Com15]
 gi|293378230|ref|ZP_06624399.1| ATP synthase F1, alpha subunit [Enterococcus faecium PC4.1]
 gi|293572427|ref|ZP_06683407.1| ATP synthase F1, alpha subunit [Enterococcus faecium E980]
 gi|294617579|ref|ZP_06697209.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1679]
 gi|294623202|ref|ZP_06702080.1| ATP synthase F1, alpha subunit [Enterococcus faecium U0317]
 gi|227178800|gb|EEI59772.1| ATP synthase subunit alpha [Enterococcus faecium TX1330]
 gi|257818363|gb|EEV45691.1| ATP synthase F1 [Enterococcus faecium 1,231,502]
 gi|257822845|gb|EEV49777.1| ATP synthase F1 [Enterococcus faecium 1,141,733]
 gi|257831924|gb|EEV58345.1| ATP synthase F1 [Enterococcus faecium Com12]
 gi|257835883|gb|EEV60957.1| ATP synthase F1 [Enterococcus faecium Com15]
 gi|291596185|gb|EFF27448.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1679]
 gi|291597397|gb|EFF28570.1| ATP synthase F1, alpha subunit [Enterococcus faecium U0317]
 gi|291607489|gb|EFF36831.1| ATP synthase F1, alpha subunit [Enterococcus faecium E980]
 gi|292643094|gb|EFF61235.1| ATP synthase F1, alpha subunit [Enterococcus faecium PC4.1]
          Length = 518

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 172/421 (40%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIENYQNVLSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 66  LESNDVGIIILGDFESIREGDKVKRTGKIMEVPVGEALIGRVVNPLGQPIDGLGEIV-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 KARPVEAMAPGVMQRKSVNEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKDSTVRTQVETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDDLGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|308273181|emb|CBX29784.1| Flagellum-specific ATP synthase [uncultured Desulfobacterium sp.]
          Length = 452

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 150/417 (35%), Positives = 235/417 (56%), Gaps = 7/417 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I  ++ +          +C+G    +          +V+      + + P G    + 
Sbjct: 36  GRIVKLSGIIAEANG--PGLCIGSLCDIETTPGHFIRAEVVGFKDSKLILMPFGELRGVK 93

Query: 83  LGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V     R  +     + GRVI+ LG+PIDG   +   D    +  +V   + R  +
Sbjct: 94  PGSKVIEITSRSTVPVGDAYIGRVIDGLGQPIDGKGEI-TCDTEYPVYGEVINPLQRGII 152

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    GIR I+    +  GQRI + AGSG+GKS L+ M AR+   D  II+L+GERGRE
Sbjct: 153 SEVMDVGIRAINSMITVGKGQRIAIMAGSGVGKSVLMGMMARNTAADVSIIALIGERGRE 212

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V+EF+E  LG+  +KKS+V+ +TSD   ++R  A   A  +AEYF  KG +VLL++DS+T
Sbjct: 213 VKEFVEKKLGEAGMKKSIVIASTSDTPALIRIRAAYFATALAEYFRDKGLDVLLVMDSVT 272

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R A S+RE+   +GE P ++GY  SVF+++P+LLER G  EK KG+IT + +VLV+GD+ 
Sbjct: 273 RVAMSLREVGLAAGEPPTSKGYTPSVFTQMPKLLERAGNLEK-KGSITGIYNVLVEGDDM 331

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           ++P+AD+VRSI+DGHIVL+R+++ +G YP +D +AS+SR+     S+D       L  ++
Sbjct: 332 SEPVADTVRSIVDGHIVLSRAVSHKGHYPAIDVMASISRVMKDIVSSDHYNRSRKLIKIL 391

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +++  D+  IG Y+ G D  +D A   +  I  FL+Q   + S  D   +   +L
Sbjct: 392 AVYKDAEDLINIGAYQSGSDPEIDFAKKMIGRINTFLQQQIDENSGFDESVQRLNQL 448


>gi|260432837|ref|ZP_05786808.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416665|gb|EEX09924.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 512

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 182/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD+V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLEADNVGVVIFGSDRDIKEGDIVKRTKSIVDVPIGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +           K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKQRGVADVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +      +                  +   +G++   V + ++       ++ S+VV 
Sbjct: 176 TAVALDTILNQKVYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEESGAIEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSAAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|55824806|gb|AAV66485.1| F1-ATPase alpha subunit [Paulownia tomentosa]
 gi|55824812|gb|AAV66488.1| F1-ATPase alpha subunit [Lindenbergia urticifolia]
 gi|55824820|gb|AAV66492.1| F1-ATPase alpha subunit [Bartsia laticrenata]
 gi|55824822|gb|AAV66493.1| F1-ATPase alpha subunit [Parentucellia viscosa]
 gi|55824826|gb|AAV66495.1| F1-ATPase alpha subunit [Stachys officinalis]
 gi|55824834|gb|AAV66499.1| F1-ATPase alpha subunit [Catalpa bignonioides]
 gi|55824838|gb|AAV66501.1| F1-ATPase alpha subunit [Globularia punctata]
          Length = 413

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|109899349|ref|YP_662604.1| flagellum-specific ATP synthase [Pseudoalteromonas atlantica T6c]
 gi|109701630|gb|ABG41550.1| flagellar protein export ATPase FliI [Pseudoalteromonas atlantica
           T6c]
          Length = 444

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 163/435 (37%), Positives = 244/435 (56%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  +  L +   +  VV  G +  +  +  T+  +   + +G   + Q  + +   +V+ 
Sbjct: 6   LGNIKALQQQVPQAPVVAAGKL--VRGIGLTLEAVGCQMPVGSQCLIQTVDGEIEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
               I Y+ P    + I  G  V    R + +       GRV++  G+P+DG  ++ K +
Sbjct: 64  FAEHITYLMPTQAVKGIVPGSRVQPLNREQGLPVGMSLLGRVVDGNGQPLDGLGAI-KAE 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + +       ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 123 KRVPLTRPPMNPLSRKPIREPLDVGVRAINSMITVGSGQRMGLFAGSGVGKSVLLGMMTR 182

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               D V++ LVGERGREV+EFI+D LGD  + KSVVV A +D SP++R     TAVTIA
Sbjct: 183 GTSADVVVVGLVGERGREVKEFIQDILGDEERQKSVVVAAPADTSPLMRLKGCETAVTIA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G   +
Sbjct: 243 EYFRDKGMNVLLLVDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGGE 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LA+ G YP +D  AS+SR+  
Sbjct: 303 HQGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRQLADSGHYPAIDIEASISRVMP 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  ++   +  +   +++ RD+  IG Y  G D  +D ++   P I  FL+Q   
Sbjct: 363 MVVSPEHVQVARRIRQVYSTYQQNRDLISIGAYTRGNDPRIDLSIKAEPAINAFLQQGMQ 422

Query: 423 DLSSEDVFQEITKKL 437
            +   D   E   KL
Sbjct: 423 QILPFDESVETMVKL 437


>gi|171696284|ref|XP_001913066.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948384|emb|CAP60548.1| unnamed protein product [Podospora anserina S mat+]
          Length = 549

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/415 (24%), Positives = 176/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 65  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 120

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 121 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPINTKEKRRA-QLKAPGILPRK 179

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ ID   P+  GQR  +      GK       +L+    +   D      
Sbjct: 180 SVNQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNSGNDETKKLY 239

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T  +I E+F   
Sbjct: 240 CIYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGASIGEWFRDN 299

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 300 GKHSLVIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDKHGGGS 359

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 360 MTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQL 419

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 420 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQKQ 471


>gi|193214589|ref|YP_001995788.1| F0F1 ATP synthase subunit alpha [Chloroherpeton thalassium ATCC
           35110]
 gi|226739858|sp|B3QWX7|ATPA_CHLT3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|193088066|gb|ACF13341.1| ATP synthase F1, alpha subunit [Chloroherpeton thalassium ATCC
           35110]
          Length = 537

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 175/448 (39%), Gaps = 43/448 (9%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   S+  V   G +  +      +  LS+ V  G+ V       +  G V+ +  D
Sbjct: 16  KQLSGFDSEVDVYDVGTVLQVGDGIARIYGLSK-VAAGELVEFP---HNVTGMVLNLEED 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V     G  + I  GD V        I       GRVIN LG+PIDG  ++ K ++ + 
Sbjct: 72  NVGAVLFGSSDLIKEGDTVKRTKILASIPVGEAMLGRVINPLGEPIDGKGAI-KTEIRLP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  + P  + R  V++  +TG++ ID   P+  GQR  +      GK+ +      +   
Sbjct: 131 LERRAPGVIFRHPVKEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAVAIDTIINQKA 190

Query: 188 DK-------------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
                           I    G++   V + +           + V+ AT+ +   L+ +
Sbjct: 191 SHTKEAQEKGAKPVYCIYVATGQKASTVAQVVNILEKHGAMEYTTVISATASDPAPLQFI 250

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           +P    T+ EYF   G + L+I D +++ A + R+++      P    YP  VF    RL
Sbjct: 251 SPYAGATLGEYFRDTGRHALVIYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRL 310

Query: 294 LERIGP--------------------SEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           LER                         K  G++TA+  +     + +  I  +V SI D
Sbjct: 311 LERAARITNDDALAKQMNDLPDSIKPMAKGGGSLTALPIIETQAGDVSAYIPTNVISITD 370

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G I L  +L   G+ P ++   SVSR+   A     KK+  +L   + ++ E        
Sbjct: 371 GQIFLESNLFNSGQRPAINVGISVSRVGGSAQIKGMKKVAGTLRLDLAQYRELE---AFA 427

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   +D      + +   + + LKQ  
Sbjct: 428 KFGSDLDKATQAQLTRGGRLVEILKQGQ 455


>gi|241664768|ref|YP_002983128.1| F0F1 ATP synthase subunit alpha [Ralstonia pickettii 12D]
 gi|309780423|ref|ZP_07675173.1| ATP synthase F1, alpha subunit [Ralstonia sp. 5_7_47FAA]
 gi|240866795|gb|ACS64456.1| ATP synthase F1, alpha subunit [Ralstonia pickettii 12D]
 gi|308920816|gb|EFP66463.1| ATP synthase F1, alpha subunit [Ralstonia sp. 5_7_47FAA]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/446 (23%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L         G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKTRIEGLKAGADAKNTGTVISVTDGICRIHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHISEGDEVKCTGRILEVPVGPELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +         + ++VV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGIFCVYVAIGQKASTIANVVRKLEEHGALEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADHIEKITNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|187930579|ref|YP_001901066.1| F0F1 ATP synthase subunit alpha [Ralstonia pickettii 12J]
 gi|226739928|sp|B2UGV1|ATPA_RALPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|187727469|gb|ACD28634.1| ATP synthase F1, alpha subunit [Ralstonia pickettii 12J]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/446 (23%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L         G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKTRIEGLKAGADAKNTGTVISVTDGICRIHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHISEGDEVKCTGRILEVPVGPELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +         + ++VV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGIFCVYVAIGQKASTIANVVRKLEEHGALEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEHIEKITNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|14017569|ref|NP_114256.1| ATP synthase CF1 alpha subunit [Triticum aestivum]
 gi|17371040|sp|P12112|ATPA_WHEAT RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|13928202|dbj|BAB47031.1| ATPase alpha subunit [Triticum aestivum]
          Length = 504

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVVNALAKPIDGKGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQGVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|69247777|ref|ZP_00604482.1| ATP synthase F1, alpha subunit [Enterococcus faecium DO]
 gi|257879712|ref|ZP_05659365.1| ATP synthase F1 [Enterococcus faecium 1,230,933]
 gi|257884019|ref|ZP_05663672.1| ATP synthase F1 [Enterococcus faecium 1,231,501]
 gi|257890376|ref|ZP_05670029.1| ATP synthase F1 [Enterococcus faecium 1,231,410]
 gi|257892984|ref|ZP_05672637.1| ATP synthase F1 [Enterococcus faecium 1,231,408]
 gi|258616678|ref|ZP_05714448.1| F0F1 ATP synthase subunit alpha [Enterococcus faecium DO]
 gi|260559629|ref|ZP_05831809.1| ATP synthase F1 [Enterococcus faecium C68]
 gi|293556418|ref|ZP_06674999.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1039]
 gi|293560030|ref|ZP_06676534.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1162]
 gi|293568726|ref|ZP_06680041.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1071]
 gi|314939614|ref|ZP_07846841.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133a04]
 gi|314941240|ref|ZP_07848136.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133C]
 gi|314949827|ref|ZP_07853137.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0082]
 gi|314953381|ref|ZP_07856306.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133A]
 gi|314993458|ref|ZP_07858823.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133B]
 gi|314997319|ref|ZP_07862284.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133a01]
 gi|68194706|gb|EAN09188.1| ATP synthase F1, alpha subunit [Enterococcus faecium DO]
 gi|257813940|gb|EEV42698.1| ATP synthase F1 [Enterococcus faecium 1,230,933]
 gi|257819857|gb|EEV47005.1| ATP synthase F1 [Enterococcus faecium 1,231,501]
 gi|257826736|gb|EEV53362.1| ATP synthase F1 [Enterococcus faecium 1,231,410]
 gi|257829363|gb|EEV55970.1| ATP synthase F1 [Enterococcus faecium 1,231,408]
 gi|260074297|gb|EEW62619.1| ATP synthase F1 [Enterococcus faecium C68]
 gi|291588686|gb|EFF20519.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1071]
 gi|291601485|gb|EFF31756.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1039]
 gi|291605897|gb|EFF35327.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1162]
 gi|313588610|gb|EFR67455.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133a01]
 gi|313592123|gb|EFR70968.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133B]
 gi|313594574|gb|EFR73419.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133A]
 gi|313599964|gb|EFR78807.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133C]
 gi|313641154|gb|EFS05734.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0133a04]
 gi|313643900|gb|EFS08480.1| ATP synthase F1, alpha subunit [Enterococcus faecium TX0082]
          Length = 518

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 172/421 (40%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIENYQNVLSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 66  LESNDVGIIILGDFESIREGDKVKRTGKIMEVPVGEALIGRVVNPLGQPIDGLGEIV-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 KARPVEAMAPGVMQRKSVNEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKDSTVRTQVETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDDLGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|229136126|ref|ZP_04264879.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST196]
 gi|228647285|gb|EEL03367.1| ATP synthase subunit alpha [Bacillus cereus BDRD-ST196]
          Length = 502

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +A    VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLYLAAYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|307823033|ref|ZP_07653263.1| ATP synthase F1, alpha subunit [Methylobacter tundripaludum SV96]
 gi|307735808|gb|EFO06655.1| ATP synthase F1, alpha subunit [Methylobacter tundripaludum SV96]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 191/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +N          G + S+T     V  LS+    G+ +   G  
Sbjct: 1   MQLNPSEISDLIKKKIENFDLSAEAHTEGTVVSVTDGIVRVHGLSE-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V +  +G  + IS GD V   G+   +       GRV++ALG PID
Sbjct: 58  -NTFGMALNLERDSVGVVVLGSYQHISEGDTVKCTGKILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   + S  I    P  + RQ V++  + G++ ID   P+  GQR  +      GK
Sbjct: 117 GKGAIETTETS-PIEKIAPGVIARQSVDEPVQLGLKSIDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TAIAIDAIINQKGTGIKCIYVAIGQKRASIANVVRKLEEHGAMAHTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  ++ E+F  +G++ L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYTGCSMGEFFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRINAAEVEKLTGGKVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL       + ++ E   +     +   
Sbjct: 356 ESDLFNSGIRPAVNAGLSVSRVGGAAQTKIIKKLGGGTRLDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ+     S
Sbjct: 413 LDENTRKQIERGQRVTELMKQNQYSPMS 440


>gi|297585421|ref|YP_003701201.1| ATP synthase F1 subunit alpha [Bacillus selenitireducens MLS10]
 gi|297143878|gb|ADI00636.1| ATP synthase F1, alpha subunit [Bacillus selenitireducens MLS10]
          Length = 501

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 181/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E+Y   + V   G +  +         L + V  G+ +  +      +G    
Sbjct: 10  SLLKQQIENYQSEIEVNDVGTVIRVGDGIAVAHGL-ENVMAGELLEFENG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   +I  G+ V   GR   +       GRV+N LG+P+DG   +  G 
Sbjct: 66  LEENTVGIIILGPFTDIREGNEVRRTGRIMEVPVGEELLGRVVNPLGQPLDGMGPVETGK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TG++ ID   P+  GQR  V      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGVKAIDSLIPIGRGQRELVIGDRQTGKTAIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V   +E          ++VV A++ +   L  +AP   V+
Sbjct: 185 NQKDEDMICIYVAIGQKESTVAGVVETLRQHGALDYTIVVTASASQPAPLLYLAPYAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +T+ A + RE++      P    +P  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVIYDDLTKQAAAYRELSLLLKRPPGREAFPGDVFYVHSRLLERAAKL 304

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +KG  ++TA+  +     + +  I  +V SI DG I L  +L   G  P +D   SVS
Sbjct: 305 SDDKGAGSLTALPFIETQAGDISAYIPTNVISITDGQIFLQANLFFSGVRPAIDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDEATQAKLNRGARTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 422 QGLHQPLSVE 431


>gi|26557005|ref|NP_085571.2| ATPase subunit 1 [Arabidopsis thaliana]
 gi|15215921|emb|CAA69802.3| ATPase subunit 1 [Arabidopsis thaliana]
          Length = 507

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 179/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +  G   GK
Sbjct: 119 GKGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGGRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|53721005|ref|YP_109991.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei K96243]
 gi|76811981|ref|YP_331597.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 1710b]
 gi|126441679|ref|YP_001060963.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 668]
 gi|126454771|ref|YP_001068263.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 1106a]
 gi|134281429|ref|ZP_01768137.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 305]
 gi|167721824|ref|ZP_02405060.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei DM98]
 gi|167740796|ref|ZP_02413570.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 14]
 gi|167818011|ref|ZP_02449691.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 91]
 gi|167826374|ref|ZP_02457845.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 9]
 gi|167847893|ref|ZP_02473401.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei B7210]
 gi|167896450|ref|ZP_02483852.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 7894]
 gi|167904852|ref|ZP_02492057.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei NCTC
           13177]
 gi|167913130|ref|ZP_02500221.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei 112]
 gi|167921067|ref|ZP_02508158.1| F0F1 ATP synthase subunit alpha [Burkholderia pseudomallei BCC215]
 gi|217423828|ref|ZP_03455328.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 576]
 gi|226193116|ref|ZP_03788726.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei Pakistan
           9]
 gi|237814347|ref|YP_002898798.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei MSHR346]
 gi|242316631|ref|ZP_04815647.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1106b]
 gi|254184025|ref|ZP_04890616.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1655]
 gi|254186490|ref|ZP_04893007.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194541|ref|ZP_04900972.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei S13]
 gi|254261178|ref|ZP_04952232.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1710a]
 gi|254298701|ref|ZP_04966152.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 406e]
 gi|81607638|sp|Q63PH8|ATPA1_BURPS RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|115312221|sp|Q3JXV6|ATPA1_BURP1 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|190358140|sp|A3P0Z2|ATPA1_BURP0 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|190358141|sp|A3NF42|ATPA1_BURP6 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|52211419|emb|CAH37410.1| ATP synthase alpha chain [Burkholderia pseudomallei K96243]
 gi|76581434|gb|ABA50909.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1710b]
 gi|126221172|gb|ABN84678.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 668]
 gi|126228413|gb|ABN91953.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1106a]
 gi|134247096|gb|EBA47182.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 305]
 gi|157808608|gb|EDO85778.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 406e]
 gi|157934175|gb|EDO89845.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|169651291|gb|EDS83984.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei S13]
 gi|184214557|gb|EDU11600.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1655]
 gi|217392891|gb|EEC32913.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 576]
 gi|225934716|gb|EEH30693.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei Pakistan
           9]
 gi|237505079|gb|ACQ97397.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei MSHR346]
 gi|242139870|gb|EES26272.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1106b]
 gi|254219867|gb|EET09251.1| ATP synthase F1, alpha subunit [Burkholderia pseudomallei 1710a]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 186/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|50812525|ref|YP_054628.1| ATP synthase CF1 alpha subunit [Saccharum officinarum]
 gi|118614489|ref|YP_899404.1| ATP synthase CF1 alpha subunit [Sorghum bicolor]
 gi|75323363|sp|Q6ENW6|ATPA_SACOF RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|125987715|sp|A1E9S1|ATPA_SORBI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|49659509|dbj|BAD27290.1| ATP synthase alpha subunit [Saccharum hybrid cultivar NCo 310]
 gi|118201123|gb|ABK79493.1| ATP synthase CF1 alpha subunit [Sorghum bicolor]
          Length = 507

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/430 (24%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  + 
Sbjct: 11  KILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++       + +F E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS S+    +
Sbjct: 423 QSQSNPLPVE 432


>gi|307720695|ref|YP_003891835.1| ATP synthase F1 subcomplex subunit alpha [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978788|gb|ADN08823.1| ATP synthase F1 subcomplex alpha subunit [Sulfurimonas autotrophica
           DSM 16294]
          Length = 505

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 106/438 (24%), Positives = 185/438 (42%), Gaps = 19/438 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++   N      + + G I S       V  LS  V  G+ V  +    
Sbjct: 4   KIQADEISSIIKERIDNFELSVDINETGKIVSYADGVAQVYGLS-NVMAGEMVEFEDG-- 60

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G V+ +    V +  +G G  +  G  V   G   ++       GRV+NALG+PIDG
Sbjct: 61  -TRGLVLNLEESSVGVVILGAGNALREGMSVKRLGTLLKVPVGDALLGRVVNALGEPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   ++   +  K P  M R+ V +   TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGPIETTEVRF-VEEKAPGIMERKSVHEPLATGIKAIDALVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +   +    I   VG++   V + +           +++V AT+ E+  L+ 
Sbjct: 179 TVALDAIINQKGNGVVCIYVAVGQKESTVAQIVRRLEDHGAMEYTIIVSATAAEAAALQF 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T VT+ EYF     + L++ D +++ A + RE++      P    YP  VF    R
Sbjct: 239 LAPYTGVTMGEYFRDNARHGLIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYVHSR 298

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E+G  ++TA+  +     +    I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERAAKLSDEEGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGVRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D +    + + 
Sbjct: 359 INVGLSVSRVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFAQFASDLDEVSRNQLERG 415

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ P      +
Sbjct: 416 QRMVEVLKQGPFSPLPAE 433


>gi|167838426|ref|ZP_02465285.1| F0F1 ATP synthase subunit alpha [Burkholderia thailandensis MSMB43]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 186/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLVCIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|299134364|ref|ZP_07027557.1| ATPase, FliI/YscN family [Afipia sp. 1NLS2]
 gi|298591111|gb|EFI51313.1| ATPase, FliI/YscN family [Afipia sp. 1NLS2]
          Length = 441

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 167/436 (38%), Positives = 258/436 (59%), Gaps = 7/436 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR 64
           + LA+   D     +   G +  +  +   V      + +G  VV + G + D   +VI 
Sbjct: 2   KALAEQIGDIDG--INIYGRVVGVRGLMVEVAGPIHAMSVGARVVIETGGDRDIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
                  + P G  + +  G   V      ++ PS  W GRV+NA+G PIDG   + +G 
Sbjct: 60  FTGSNAVLMPFGGLDGVRRGCRAVIANAASQVRPSPAWLGRVVNAMGDPIDGKGPIEQGA 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M   +  PPA +R+RV +    G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMPFRNLPPPAHSRKRVGQPLDLGVRALNTFLTCCSGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D  +I LVGERGREV+EF++D    + L +SVVVVATSDE  ++R+ A    + I+
Sbjct: 180 NVDADISVIGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAIS 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G NVL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP   
Sbjct: 240 EYFRDEGQNVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLG 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ RS+AE GRYP ++ L SVSR   
Sbjct: 300 -EGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMERSIAERGRYPAINILKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K+   +   ++     ++  + +  ++  +G YR G    +D+A+     + +FL+Q+ +
Sbjct: 359 KSADPEFLPVIMRGRQVMATYADMEELIRLGAYRAGSSAEVDEAIRLHEPLENFLRQAKN 418

Query: 423 DLSSEDV-FQEITKKL 437
           + +  +  ++++ + L
Sbjct: 419 EATGLEAGYRQLQQIL 434


>gi|237747185|ref|ZP_04577665.1| membrane-bound ATP synthase [Oxalobacter formigenes HOxBLS]
 gi|229378536|gb|EEO28627.1| membrane-bound ATP synthase [Oxalobacter formigenes HOxBLS]
          Length = 516

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   ++ L ++  +NL     +   G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MLLNPSEISDLIKNRIENLGDSAEIRNQGTVISVSDGICRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR    P      GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPTGPELIGRVVDALGSPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTSPIEKIAPGVIARQSVSQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   VG++   ++  +     +     ++VV AT+ ES  ++
Sbjct: 176 TAVAIDAIINQKGQDMICIYVAVGQKASSIKNTVRALEDNGAMDYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G + L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YIAPYAGCAMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHYVEQFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAINAGISVSRVGGAAQTKAIKSLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    + + +   + + LKQ+ 
Sbjct: 413 LDEATRRQLDRGARVTELLKQNQ 435


>gi|261208694|ref|ZP_05923131.1| ATP synthase F1 [Enterococcus faecium TC 6]
 gi|289566049|ref|ZP_06446486.1| ATP synthase F1, alpha subunit [Enterococcus faecium D344SRF]
 gi|260077196|gb|EEW64916.1| ATP synthase F1 [Enterococcus faecium TC 6]
 gi|289162156|gb|EFD10019.1| ATP synthase F1, alpha subunit [Enterococcus faecium D344SRF]
          Length = 518

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 172/421 (40%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIENYQNVLSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 66  LESNDVGIIILGDFESIREGDKVKRTGKIMEVPVGEALIGRVVNPLGQPIDGLGEIV-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 KARPVEAMAPGVMQRKSVNEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKDSTVRTQVETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDDLGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|167564620|ref|ZP_02357536.1| F0F1 ATP synthase subunit alpha [Burkholderia oklahomensis EO147]
 gi|167571762|ref|ZP_02364636.1| F0F1 ATP synthase subunit alpha [Burkholderia oklahomensis C6786]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 186/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|300313648|ref|YP_003777740.1| F0F1-type ATP synthase subunit alpha [Herbaspirillum seropedicae
           SmR1]
 gi|124483608|emb|CAM32677.1| F0F1-type ATP synthase, alpha subunit protein [Herbaspirillum
           seropedicae]
 gi|300076433|gb|ADJ65832.1| F0F1-type ATP synthase, alpha subunit protein [Herbaspirillum
           seropedicae SmR1]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNASEISELIKSRIQGLGDTAEIRNQGTVISVSDGICRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR    P      GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDVVKCTGRILEVPIGPELKGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTAPIEKIAPGVIARQSVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V+  +           ++VV AT+ ES  ++
Sbjct: 176 TAVAIDAIINQKGQNMTCIYVAIGQKASSVKNVVRALEAHGAMEYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +   + EYF  +G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 236 YVSAYSGCAMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETSLFNAGIRPAINAGISVSRVGGAAQTKVIKGLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + LKQ+     S
Sbjct: 413 LDEATRKQLDRGARVTELLKQAQYTPQS 440


>gi|55824816|gb|AAV66490.1| F1-ATPase alpha subunit [Orobanche fasciculata]
          Length = 411

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKEV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|15606090|ref|NP_213467.1| F0F1 ATP synthase subunit alpha [Aquifex aeolicus VF5]
 gi|3913127|sp|O66907|ATPA_AQUAE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|2983261|gb|AAC06855.1| ATP synthase F1 alpha subunit [Aquifex aeolicus VF5]
          Length = 503

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++ LE L Q  +D+     ++  G +  +         L + V   + V  QG      G
Sbjct: 7   EEALEILRQQIKDFEPEAKMEEVGVVYYVGDGVARAYGL-ENVMAMEIVEFQGGQQ---G 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSL 119
               +  D V I  +G    I  G +V   GR           GRVI+ LG P+DG   +
Sbjct: 63  IAFNLEEDNVGIIILGSETGIEEGHIVKRTGRILDAPVGEGLVGRVIDPLGNPLDGKGPI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            + +    +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+  
Sbjct: 123 -QFEYRSPVEKIAPGVVKRKPVHEPLQTGIKAIDAMIPIGRGQRELIIGDRATGKTTVAI 181

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++ A+ +     I   VG++   +   IE    +     + VVVA++ +   L+ +AP 
Sbjct: 182 DTILAQKNSDVYCIYVAVGQKRAAIARLIELLEREGAMEYTTVVVASASDPASLQYLAPF 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              TI EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 VGCTIGEYFRDNGKHALIIYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++  
Sbjct: 302 AAKLNDDLGAGSLTALPIIETKAGDVAAYIPTNVISITDGQIYLEADLFNKGIRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  +L   + +F E         +   +D    + +++   + 
Sbjct: 362 LSVSRVGGAAQIKAMKQVAGTLRLELAQFRELE---AFVQFASELDKATQQQINRGLRLV 418

Query: 415 DFLKQSPSDL 424
           + LKQ P + 
Sbjct: 419 ELLKQEPYNP 428


>gi|331701227|ref|YP_004398186.1| ATP synthase subunit alpha [Lactobacillus buchneri NRRL B-30929]
 gi|329128570|gb|AEB73123.1| ATP synthase subunit alpha [Lactobacillus buchneri NRRL B-30929]
          Length = 518

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 112/430 (26%), Positives = 175/430 (40%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y   L V + G ++ +         L   +  G+ +          G V  
Sbjct: 10  ALIKQQLQGYKNELDVQETGIVTYVGDGIARAHGLENALS-GELLDF---GHGVYGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G    I  GD V   GR   +       GRV+N+LG+PIDG   + K D
Sbjct: 66  LETNDVGIMILGDDTNIREGDSVKRTGRIMEVPVGDEMIGRVVNSLGEPIDGKGPI-KAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+++      
Sbjct: 125 DHKAIEHKAPGVMDRQSVFEPLQTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   VR  +           + V+ A   E   L  +AP    T
Sbjct: 185 NQKGQNMKCIYVAIGQKQSTVRTAVSTLEKYGAMDYTTVISAGPSEPASLLYIAPYAGAT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG +VL+I D +++ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEYFMHKGQHVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+      G  P VD   SVS
Sbjct: 305 SDKLGGGSMTAMPIVETQAGDVSAYIPTNVISITDGQIFLDADSFYSGVRPAVDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVSGTLRLDLASYHELESFAQFG---SDLDEATQSKLNRGARTVEVLK 421

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 422 QPLHSPISVE 431


>gi|319940679|ref|ZP_08015021.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 3_1_45B]
 gi|319805830|gb|EFW02597.1| ATP synthase subunit alpha 1 [Sutterella wadsworthensis 3_1_45B]
          Length = 513

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/446 (23%), Positives = 187/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELLKKRIEGLGVSADLRTQGTVVSLSDGIARIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EVYGLALNLERDSVGAVILGEYEGISEGDTVKTTGRILSVPVGEELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + +    P  ++R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKAFDV-VEKVAPGVIDRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +           ++VV AT+ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLICVYVAIGQKASTIANVVAKLEEHGAMDYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGATMGEYFRDRGQDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTKGEIKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++   R +     +   
Sbjct: 356 ETDLFNAGIRPAINPGISVSRVGGAAQTKVIKKLGGGVRLALAQY---RALAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D +  K + +  ++ + +KQ     
Sbjct: 413 LDEVTRKQLERGRMVTELMKQPQYQP 438


>gi|154174001|ref|YP_001407433.1| flagellum-specific ATP synthase [Campylobacter curvus 525.92]
 gi|112803229|gb|EAU00573.1| flagellar protein export ATPase FliI [Campylobacter curvus 525.92]
          Length = 435

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 168/438 (38%), Positives = 248/438 (56%), Gaps = 7/438 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQ 61
           NLE L    +    +L    G I+ IT+    +T L     +GD V  V + K+ + LG 
Sbjct: 2   NLERLNLKLKSKDLSLSNTFGIITKITATNIEITGLCP--SIGDIVRIVAKDKSKNGLGM 59

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V +I     +I P G  E   +GD V+   +   I       GRV++   KP+DG  ++ 
Sbjct: 60  VTQIKSGGAFISPFGFVEGFRIGDFVYASDQGMNIPVGRNLLGRVVDPFMKPVDGKGAIE 119

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +  M IM     AM R  + + F  GI+ ID       GQ++G+FAGSG+GKSTL+ M
Sbjct: 120 TSEY-MPIMKAPIDAMKRGLINEPFSVGIKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGM 178

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             ++      +++L+GERGREV EFIE  LG NL  +V+VVATSD+S ++RK     A++
Sbjct: 179 IVKNTLAPIKVVALIGERGREVPEFIEKNLGGNLDGTVIVVATSDDSSLMRKYGAFCAMS 238

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF ++G++VL I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  
Sbjct: 239 VAEYFKNQGNDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAGKE 298

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+
Sbjct: 299 EG-KGSITAFFTVLVEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRV 357

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S + ++       L    +E   +  IG Y+ G D  LD A+ +   + +FLKQ 
Sbjct: 358 MGDVISNEHRQNAMKFKRLYSLLKENEVLLRIGAYQRGSDKELDLAISKKEYMENFLKQD 417

Query: 421 PSDLSSEDVFQEITKKLQ 438
             ++   +  Q +  ++ 
Sbjct: 418 AQEVYKFEEIQSLLAQIN 435


>gi|302388310|ref|YP_003824132.1| ATP synthase F1, alpha subunit [Clostridium saccharolyticum WM1]
 gi|302198938|gb|ADL06509.1| ATP synthase F1, alpha subunit [Clostridium saccharolyticum WM1]
          Length = 500

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 184/444 (41%), Gaps = 21/444 (4%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + YS  L V   G +  +      +  L +    G+ +   G   D  G V+ 
Sbjct: 10  SVIKEQIQRYSTKLDVSDVGTVIQVADGIARIHGL-ENAMQGELLEFPG---DIYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    IS GD V   GR   +       GRV+NALG+PIDG   + + +
Sbjct: 66  LEEDNVGAVLLG-TSAISEGDTVKTTGRVVEVPVGDALTGRVVNALGQPIDGKGPI-QTE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 124 KFRKIERVAHGVIDRKSVDTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIALDTII 183

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          + +VV+T+ +   L+ +AP +   
Sbjct: 184 NQKGQGVHCIYVAIGQKASTVATIVKTLEEYGAMDYTTIVVSTASDLAPLQYIAPYSGCA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +   GD+VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 244 IGEEWMENGDDVLVVYDDLSKHAAAYRTLSLLLKRPPGREAYPGDVFYLHSRLLERASRL 303

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G++TA+  +     + +  I  +V SI DG I L   +   G  P ++   SVS
Sbjct: 304 SEELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRPAINAGLSVS 363

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+ + +   + ++ E   +     +   +D    + + Q   I + LK
Sbjct: 364 RVGGSAQIKAMKKIAAPIRVELAQYRE---LASFAQFGSELDKETAEQLAQGERIREVLK 420

Query: 419 QSPSDLSSED-----VFQEITKKL 437
           Q        +     +F    K L
Sbjct: 421 QGQYQPIPVEYQIIIIFAATKKLL 444


>gi|170086766|ref|XP_001874606.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649806|gb|EDR14047.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 540

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 185/447 (41%), Gaps = 27/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E       V     + G + S+      V  L + V   + V     +S
Sbjct: 33  KPAASEVSSILESRISGTSVGGNVEETGRVLSVGDGIGRVWGL-RNVQAEEMVEF---SS 88

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +  D V +   G    I  GD V   G+   +       GRV++ALG PIDG
Sbjct: 89  GVRGMCLNLEADNVGVSIFGNDRLIKEGDTVKRTGQIVDVPVGPGLLGRVVDALGDPIDG 148

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +   +       K P  + R+ V +   TG++ ID   P+  GQR  +      GK 
Sbjct: 149 KGPIDAIE-RRRASVKAPGILPRRSVNQPMMTGLKPIDAMVPIGRGQRELIIGDRQTGKT 207

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATS 224
                T+L+    +D  D       +   +G++   V + ++    ++  K +++V AT+
Sbjct: 208 AVAIDTILNQKRWNDGADESKKLYCVYVAIGQKRSTVAQLVKTLEENDAMKYTIIVAATA 267

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP +   + E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 268 SEAAPLQYLAPFSGCAMGEWFRDNGKHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPG 327

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 328 DVFYLHSRLLERAAKMSDKFGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAEL 387

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A +   KK   SL   + ++ E   +     +   +D  
Sbjct: 388 FFRGVRPAINVGLSVSRVGSAAQTKIMKKFAGSLKLYLAQYRE---VAAFAQFGSDLDAS 444

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDV 429
               + +   + + LKQ      + +V
Sbjct: 445 TRFLLSRGARLTELLKQGQYQPLATEV 471


>gi|19115831|ref|NP_594919.1| F1-ATPase alpha subunit [Schizosaccharomyces pombe 972h-]
 gi|114526|sp|P24487|ATPA_SCHPO RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|173347|gb|AAA35286.1| ATP-synthase alpha-subunit [Schizosaccharomyces pombe]
 gi|2330687|emb|CAB11207.1| F1-ATPase alpha subunit [Schizosaccharomyces pombe]
          Length = 536

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 100/427 (23%), Positives = 184/427 (43%), Gaps = 22/427 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            ++   Y++  +++ G + SI      ++ LS  V   + V     +S   G  + +  D
Sbjct: 42  ERIRGAYNQAQMMESGRVLSIGDGIARISGLS-NVQAEELVEF---SSGIKGMALNLEAD 97

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V     G    +  G++V        +       GRV++ALG PIDG   +   +    
Sbjct: 98  TVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGPIKTTE-RRR 156

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFA 182
           +  K P  + R  V +  +TG++ ID   P+  GQR  +      GK      T+L+   
Sbjct: 157 VQLKAPGILPRTSVCEPMQTGLKAIDSMVPIGRGQRELIIGDRQTGKTAIALDTILNHKR 216

Query: 183 RSDCFD-----KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
            ++  D       +   VG++   V + ++     D+LK S++V AT+ ES  L+ +AP 
Sbjct: 217 WNNSSDESKKLYCVYVAVGQKRSTVAQLVQKLEENDSLKYSIIVAATASESAPLQYLAPF 276

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +   + E+F   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 277 SGCAMGEWFRDNGKHGLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 336

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++  
Sbjct: 337 AAKMSPKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGIRPAINVG 396

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   +   + ++ E   +     +   +D      + +   + 
Sbjct: 397 LSVSRVGSAAQVKAMKQVAGQIKLFLAQYRE---VASFAQFGSDLDAGTRATLDRGLRLT 453

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 454 ELLKQPQ 460


>gi|313669154|ref|YP_004049438.1| ATP synthase alpha chain [Neisseria lactamica ST-640]
 gi|313006616|emb|CBN88082.1| ATP synthase alpha chain [Neisseria lactamica 020-06]
          Length = 515

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|257867453|ref|ZP_05647106.1| H+ ATPase [Enterococcus casseliflavus EC30]
 gi|257873783|ref|ZP_05653436.1| H+ ATPase [Enterococcus casseliflavus EC10]
 gi|257877533|ref|ZP_05657186.1| H+ ATPase [Enterococcus casseliflavus EC20]
 gi|257801509|gb|EEV30439.1| H+ ATPase [Enterococcus casseliflavus EC30]
 gi|257807947|gb|EEV36769.1| H+ ATPase [Enterococcus casseliflavus EC10]
 gi|257811699|gb|EEV40519.1| H+ ATPase [Enterococcus casseliflavus EC20]
          Length = 518

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 173/426 (40%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIKNYQNELSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   + + D
Sbjct: 66  LESNDVGIIILGDFETIREGDKVKRTGKIMEVPVGDALIGRVVNPLGQPIDGLGPI-ETD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+T+      
Sbjct: 125 KSRPVEAAAPGVMQRKSVSEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTTIAIDAII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKDSTVRAQVETLRRYGALDYTIVVSAGASQPAPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L   L   G  P V    SVS
Sbjct: 305 SDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLENDLFYSGVRPAVAAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QKLHEP 427


>gi|268316354|ref|YP_003290073.1| ATPase, FliI/YscN family [Rhodothermus marinus DSM 4252]
 gi|262333888|gb|ACY47685.1| ATPase, FliI/YscN family [Rhodothermus marinus DSM 4252]
          Length = 450

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 163/424 (38%), Positives = 237/424 (55%), Gaps = 12/424 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKN---SDNLGQVIRINLDIVYICPVG 76
           +  G + S+  +    + L     +G+   +H+G+         +V+ +  +   + P+ 
Sbjct: 26  LHFGKVQSVVGLLIEASEL--PAAVGELCYIHEGQEPGARRIKAEVVGLRGNTTILMPLE 83

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G LV        I       GRV++A  +PIDG   L   D    + +  PP 
Sbjct: 84  ETRGLRAGYLVEPSALPLTIRVGEAMLGRVVDANARPIDGKGPLTVTD-EQPVRNDPPPP 142

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++R+ ++    TGIR ID F  L  GQRIG+FAGSG+GKSTLL M AR    D  +I+L+
Sbjct: 143 LSRRMIDTPLFTGIRAIDTFLTLGRGQRIGIFAGSGVGKSTLLGMIARRARADVNVIALI 202

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EFI D LG + LK+SVVV  T D++ + R      A+ IAEYF  +G +VLL
Sbjct: 203 GERGREVQEFIADNLGPEGLKRSVVVAVTGDQAAMSRVKGASVAMAIAEYFRDRGLDVLL 262

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DSITR A + REI    GE P  RGY  SVF+ LPRLLER GP    +G IT + +VL
Sbjct: 263 MMDSITRVAMAQREIGLAVGEPPTTRGYTPSVFAMLPRLLERAGPGA--RGTITGIFTVL 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VD D+ NDPI D+VR ILDGHIVL+R LA    +P +D L SVSR+  +  +A+ + LV 
Sbjct: 321 VDADDMNDPIGDAVRGILDGHIVLSRRLAHANHFPAIDVLQSVSRVMPRVTTAEHRALVE 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
               L+  ++E  D+  +G Y  G    +D+A+     +  FL+Q   +++  D   ++ 
Sbjct: 381 EARRLLATYQEAEDLIRVGAYEMGTRPEIDRAILAHEALMAFLRQGVDEVAD-DPVAQLA 439

Query: 435 KKLQ 438
             L+
Sbjct: 440 DMLR 443


>gi|156618811|ref|YP_001430093.1| ATP synthase CF1 alpha subunit [Cuscuta reflexa]
 gi|190358169|sp|A7M951|ATPA_CUSRE RecName: Full=ATP synthase subunit alpha, plastid; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|156555996|emb|CAM98379.1| ATP synthase CF1 alpha chain [Cuscuta reflexa]
          Length = 511

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 180/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y++ + ++  G +  +      +  L + V  G+ V  +      +G  + + 
Sbjct: 13  IRERIEQYNREVKILNKGTVLQVGDAIARIHGLYE-VMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I     + GRVINA   PIDG   +      
Sbjct: 69  SNNVGVVLMGDGLMIKEGSSVKATGRIAQIPVGEAYLGRVINAQANPIDGRGKISSSAFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I +  P  ++R+ + +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IEASAPGIISRRSIYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIINQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +           ++VV  T+D    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIVVAETADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF     + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYSERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 KLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSVDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKTSQNQLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|50058569|gb|AAT69037.1| F1-ATPase alpha subunit [Lepistemon owariensis]
          Length = 430

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV         P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTXSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|48478769|ref|YP_024377.1| ATP synthase CF1 alpha subunit [Saccharum hybrid cultivar
           SP-80-3280]
 gi|48478671|gb|AAT44691.1| ATP synthase CF1 alpha chain [Saccharum hybrid cultivar SP80-3280]
          Length = 507

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/430 (24%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  + 
Sbjct: 11  KILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKF 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++       + +F E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS S+    +
Sbjct: 423 QSQSNPLPVE 432


>gi|114330302|ref|YP_746524.1| F0F1 ATP synthase subunit alpha [Nitrosomonas eutropha C91]
 gi|122314652|sp|Q0AJB2|ATPA1_NITEC RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|114307316|gb|ABI58559.1| ATP synthase F1 subcomplex alpha subunit [Nitrosomonas eutropha
           C91]
          Length = 513

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 191/443 (43%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L V       G I S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSKIEGLSVTSEFRTQGTIVSLTDGIVRVHGLSD-VMQGEMLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G  + +  D V    +G  E ++ GD+V   GR   +       GRV+NALG+PID
Sbjct: 59  --TYGLALNLERDSVGAVILGAYEHLTEGDIVKCTGRVLEVPVGEALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    +   I    P  ++R+ V++  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPVAAQGME-PIEKIAPGVISRKSVDQPMQTGLKSVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +   +    I   +G++   +   +           ++VVVA++ ES  ++
Sbjct: 176 TAVAIDAIINQKGEDMICIYVAIGQKASSIANVVRKLEEVGAMAYTIVVVASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  KG + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFRDKGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKATGGKVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESDLFNAGIRPAINAGVSVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +  +  + +KQ+ 
Sbjct: 413 LDEATRKQLERGKMATELMKQAQ 435


>gi|108796967|ref|YP_636267.1| CF1 alpha subunit of ATP synthase [Pseudendoclonium akinetum]
 gi|115312264|sp|Q3ZJ00|ATPA_PSEAK RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|56159665|gb|AAV80689.1| CF1 alpha subunit of ATP synthase [Pseudendoclonium akinetum]
          Length = 502

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q    YS+ + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRQQIAQYSEEVKVVNVGTVFQVGDGIARIYGLEK-VMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  I  G  V   G+  +I  S  + GRV+N+L  PIDG  ++   +
Sbjct: 67  LETKNVGAVLMGDGLAIQEGSSVRATGKIAQIPVSESYLGRVVNSLALPIDGKGAINSSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESLAPGIISRRSVHEPLQTGLVAVDAMIPIGRGQRELIIGDRQTGKTAIAVDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V AT+D    L+ +AP T  T
Sbjct: 186 NQKGKDVICVYVAIGQKASSIAQVVNSLEERGCLSYTIIVAATADTPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG + L+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 246 LAEYFMYKGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 SDQLGGGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSGDIFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D    K + +   + + LK
Sbjct: 366 RVGSAAQPKAMKKVAGKLKLELAQFAELE---AFSQFASDLDQATQKQLSRGSRLRELLK 422

Query: 419 QSPS 422
           Q+ S
Sbjct: 423 QAQS 426


>gi|309322117|ref|YP_003933933.1| ATP synthase CF1 alpha subunit [Erodium texanum]
 gi|197132388|gb|ACH47712.1| ATP synthase CF1 alpha subunit [Erodium texanum]
 gi|300069210|gb|ADJ66332.1| ATP synthase CF1 alpha subunit [Erodium texanum]
          Length = 504

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 186/428 (43%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y++ + +V  G +  +      +  L+  V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIKQYNREVNIVNMGIVLQVGDGIARIYGLND-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  SNNVGVVLMGGGLRIQEGSSVKGTGRIAQIPVSEAYLGRVVNALAKPIDGRGGISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +      K ++VV  T+     L+ +AP T   +A
Sbjct: 188 RGKDVICVYVAIGQKASSVAQVVTTFQETGAMKYTIVVAETAASPAALQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 NLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---AFAQFASDLDKNTQNQLARGRRLRELLKQS 424

Query: 421 PSDLSSED 428
            ++    +
Sbjct: 425 QAEPLEVE 432


>gi|146338576|ref|YP_001203624.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278]
 gi|146191382|emb|CAL75387.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278]
          Length = 441

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 161/437 (36%), Positives = 251/437 (57%), Gaps = 6/437 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            ++ LA+   D     V   G +  +  +   +      + +G  +V +  ++    +VI
Sbjct: 1   MMKALAEQISDIDA--VNTYGRVVGVKGLMVEIAGPIHAMSVGARIVIETGSTVIPAEVI 58

Query: 64  RINLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             +     + P    E +  G   V      ++ PS  W GRV+NA+G+PIDG   L  G
Sbjct: 59  GFSGKNAVVMPFAGLEGVRRGCRAVIANSANQVRPSPAWLGRVVNAMGEPIDGKGPLPSG 118

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              +   +  PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM A
Sbjct: 119 AAPVPYRNNPPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLA 178

Query: 183 RSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+      +I L+GERGREV+EF++ D   + L +SVVVVATSDE  ++R+ A    + I
Sbjct: 179 RNVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAI 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           +EYF  +G +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP  
Sbjct: 239 SEYFRDEGKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G IT + +VLVDGD+HN+P+AD+VR ILDGH+V+ RS+AE GRYP ++ L SVSR  
Sbjct: 299 G-EGTITGIFTVLVDGDDHNEPVADAVRGILDGHVVMQRSIAERGRYPAINILKSVSRTM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K+        +     ++  + +  ++  +G YR G    +D+A+     +  FL+Q  
Sbjct: 358 PKSADPVFLPTIMRARQVMATYADMEELIRLGAYRAGSSPEVDEAIRLHEPLETFLRQRK 417

Query: 422 SDLSS-EDVFQEITKKL 437
            ++ +    ++E+ + L
Sbjct: 418 DEVCTLSQGYRELEQIL 434


>gi|254510351|ref|ZP_05122418.1| ATP synthase F1, alpha subunit [Rhodobacteraceae bacterium KLH11]
 gi|221534062|gb|EEE37050.1| ATP synthase F1, alpha subunit [Rhodobacteraceae bacterium KLH11]
          Length = 512

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 100/447 (22%), Positives = 182/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLESDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPIGDELLGRVVDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPINASKRGVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +      +                  +   +G++   V + ++       ++ S+VV 
Sbjct: 176 TAVALDAILNQKVYNEAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEESGAIEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AEYF   G + L+I D +++ A S R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAATAMAEYFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTNSMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|229000093|ref|ZP_04159663.1| ATP synthase subunit alpha [Bacillus mycoides Rock3-17]
 gi|229007613|ref|ZP_04165207.1| ATP synthase subunit alpha [Bacillus mycoides Rock1-4]
 gi|228753624|gb|EEM03068.1| ATP synthase subunit alpha [Bacillus mycoides Rock1-4]
 gi|228759630|gb|EEM08606.1| ATP synthase subunit alpha [Bacillus mycoides Rock3-17]
          Length = 502

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTT- 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 125 STRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +A    VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAAYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|261364181|ref|ZP_05977064.1| ATP synthase F1, alpha subunit [Neisseria mucosa ATCC 25996]
 gi|288567788|gb|EFC89348.1| ATP synthase F1, alpha subunit [Neisseria mucosa ATCC 25996]
          Length = 515

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSGNTEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTSS-TAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|255067776|ref|ZP_05319631.1| ATP synthase F1, alpha subunit [Neisseria sicca ATCC 29256]
 gi|255047987|gb|EET43451.1| ATP synthase F1, alpha subunit [Neisseria sicca ATCC 29256]
          Length = 515

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSGNTEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTSS-TAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|55824808|gb|AAV66486.1| F1-ATPase alpha subunit [Sesamum indicum]
          Length = 413

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKAKGESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|90425705|ref|YP_534075.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB18]
 gi|90107719|gb|ABD89756.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18]
          Length = 441

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 169/440 (38%), Positives = 255/440 (57%), Gaps = 10/440 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIR 64
           + LA+   D     V+  G +  +  +   +      + +G  +V +   S  +  +VI 
Sbjct: 2   KALAEQIGDIDG--VMMYGRVVGVRGLMVEIAGPIHAMSVGARIVVETGGSRFIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            N +   + P    E +  G   V      ++ PS  W GRV+NA+G+PIDG   L +G 
Sbjct: 60  FNGNNAVVMPFAGLEGVRRGCRAVIANAAAQVRPSPSWLGRVLNAMGEPIDGKGPLTQGT 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M   +  PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMTFRNAPPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D  +I LVGERGREV+EF++D LGD    +SVVVVATSDE  ++R+ A    + I+
Sbjct: 180 NVDADVSVIGLVGERGREVQEFLQDDLGDEGMARSVVVVATSDEPALMRRQAAYLTLAIS 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP   
Sbjct: 240 EYFRDDGKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLN 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR   
Sbjct: 300 -EGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINILKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K+       ++     ++  + +  ++  +G YR G    +D+A+     + DFL+Q   
Sbjct: 359 KSADPAYLPIIRRARQIMGTYADMEELIRLGAYRAGSSPEVDEAIRLHQPLEDFLRQGKE 418

Query: 423 DLSSEDV----FQEITKKLQ 438
           + ++        ++I   L+
Sbjct: 419 EATALQAGYAQLEQIVSNLE 438


>gi|229020526|ref|ZP_04177272.1| ATP synthase subunit alpha [Bacillus cereus AH1273]
 gi|229026746|ref|ZP_04183079.1| ATP synthase subunit alpha [Bacillus cereus AH1272]
 gi|228734541|gb|EEL85202.1| ATP synthase subunit alpha [Bacillus cereus AH1272]
 gi|228740773|gb|EEL91025.1| ATP synthase subunit alpha [Bacillus cereus AH1273]
          Length = 502

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +   +
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTN 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -TRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +A    VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALDYTIVVTASASQPAPLLYLAAYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|218767493|ref|YP_002342005.1| F0F1 ATP synthase subunit alpha [Neisseria meningitidis Z2491]
 gi|81622766|sp|Q9JW72|ATPA_NEIMA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|121051501|emb|CAM07794.1| ATP synthase alpha chain [Neisseria meningitidis Z2491]
 gi|319409755|emb|CBY90061.1| ATP synthase alpha chain [Neisseria meningitidis WUE 2594]
          Length = 515

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEHEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|134300983|ref|YP_001114479.1| ATP synthase F1 subunit alpha [Desulfotomaculum reducens MI-1]
 gi|189081298|sp|A4J9A1|ATPA_DESRM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|134053683|gb|ABO51654.1| ATP synthase F1 subcomplex alpha subunit [Desulfotomaculum reducens
           MI-1]
          Length = 501

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 100/432 (23%), Positives = 165/432 (38%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ +             V   G +  +      V  L   +   + +   G  
Sbjct: 1   MNLRPEEISSIIRQQIDKYEAQVEVSDVGTVIQVGDGIARVYGLEDCMAA-ELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              LG  + +  D +    +G    I  GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --TLGMALNLEEDNIGCVIMGPYTHIKEGDPVKRTGRIISVPVGDALIGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K +         P  + R+ V    +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTEKYRPTERIAPGVITRKSVTVPLQTGLKAIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   VG++   V   ++          S+VV A + E   L 
Sbjct: 176 TAVAVDAIINQKGQDVICIYVAVGQKASTVAGVVQTLEAHGAMEYSIVVAANASEPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + E F   G +VL+I D +++ A + RE++      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEEFMDNGKDVLIIYDDLSKQATAYREMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPS--EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERAARLAPEFGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++   L   + ++ E   +     +   +D      +++
Sbjct: 356 AISVGLSVSRVGGAAQIKAMKQVAGQLRLDLAQYRE---LAAFAQFGSDLDKATQARLNR 412

Query: 410 VPIIYDFLKQSP 421
                  LKQ  
Sbjct: 413 GARTVQILKQGQ 424


>gi|323699975|ref|ZP_08111887.1| ATP synthase F1, alpha subunit [Desulfovibrio sp. ND132]
 gi|323459907|gb|EGB15772.1| ATP synthase F1, alpha subunit [Desulfovibrio desulfuricans ND132]
          Length = 502

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/437 (22%), Positives = 184/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++++ +D  +N   +      G +  +      V  + + V   + +   G  
Sbjct: 1   MQIKAEEISKIIQDQIQNYESRVEMSETGTVLYVGDGIARVHGV-ENVMAMELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G V+ +  D V +  +G    +  GD V   G+   +       GRV+N LG+PID
Sbjct: 59  --LMGMVLNLEEDNVGVALLGSDTGVKEGDPVKRTGQIYSVPVGDGVMGRVVNPLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++   +  K P  + R+ V +   TG++ ID  TP+  GQR  V      GK
Sbjct: 117 GLGPIESTEVR-PVEMKAPGIIARKSVHEPCYTGLKAIDAMTPVGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ A+           +G++   V    +          + +V AT+ E   L+
Sbjct: 176 TAVCIDAILAQKTTDVHCFYVAIGQKKASVALVADVLRQHGAMEYTTIVSATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A  T  T+AE++ + G + L+  D +++ A + RE++      P    +P  VF    
Sbjct: 236 YIAAYTGATMAEFYRNNGKHALICYDDLSKQATAYREMSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG I L  +L   G  P
Sbjct: 296 RLLERACKVNDSLGAGSLTALPVIETQAGDVSAFIPTNVISITDGQIYLEPNLFLSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      +++
Sbjct: 356 AINVGLSVSRVGGSAQIKAMKQVAGTLRLDLAQYRE---LAAFASFGSDLDKATLAKLNR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      +
Sbjct: 413 GARMVELLKQPQYQPLT 429


>gi|304316370|ref|YP_003851515.1| ATP synthase F1 subunit alpha [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777872|gb|ADL68431.1| ATP synthase F1, alpha subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 506

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 177/439 (40%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + E+  KN          G++ +       +  L + +  G+ V  +   
Sbjct: 1   MDIKPEEITSILENKIKNFDFTIKTEDVGHVITAGDGIAKIYGLDEAI-YGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +  D V +  +G  E I  G  V   G+   +       GRV+N LG+P+D
Sbjct: 59  --VYGMVMNLEEDSVGVIVLGDPEAIKEGTTVKRTGKVVEVPVGYGLLGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D +  +    PP + R+ V+   +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPV-KSDGTRPVEYPAPPIIKRKPVDTPLQTGILAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +  D     I   +G++   +   +           + VV +T+ +S  L+
Sbjct: 176 TAIAVDTIINQKDKDVYCIYVAIGQKASTIAGLVNTLEKFGAMSYTTVVASTASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     +AEYF     +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMAEYFMYNKKDVLIVYDDLSKHAVAYRTISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSARLSDDMGGGSITALPIIETLAGDISAYIPTNVISITDGQIYLESELFYAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   +   + ++ E     +   +   +D      + Q
Sbjct: 356 AINVGLSVSRVGGAAQKKAMKKVSGRMRLELSQYRELE---VFAQFGSDLDKSTLDLLKQ 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I +  KQ      S +
Sbjct: 413 GERIVEITKQPRYQPISME 431


>gi|55824810|gb|AAV66487.1| F1-ATPase alpha subunit [Verbena bonariensis]
          Length = 413

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGAKLTEILKQPQ 401


>gi|55824832|gb|AAV66498.1| F1-ATPase alpha subunit [Campsis radicans]
          Length = 413

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGNDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSDSETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|315453868|ref|YP_004074138.1| ATP synthase F1 sector subunit alpha [Helicobacter felis ATCC
           49179]
 gi|315132920|emb|CBY83548.1| ATP synthase F1 sector alpha subunit [Helicobacter felis ATCC
           49179]
          Length = 501

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 184/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           ++   E ++ + ++  +N      + Q G + +       V  L   +   + V  +  +
Sbjct: 2   LKLKPEEISNIIKERIENFTPDINITQVGRVVAYADGVAKVYGLKDVMSY-EVVEFETGD 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G    +    + +  +G G+ I  G  V    +  ++       GRVIN LG+PID
Sbjct: 61  K---GLASNLEEGSIGVIVLGAGKNIKEGTSVKRTKQLMKVPVGDAVMGRVINTLGEPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   +    +  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GKGAIRADEFRF-VEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGK 176

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        I   +G++   V + +           SVVV A +  SP ++
Sbjct: 177 TTVAIDTIINQKGQDVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVVNAPASTSPAMQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VTI EYF   G + L+I D +++ A + REI+      P    +P  VF    
Sbjct: 237 YLAPYAGVTIGEYFRDHGRHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHS 296

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      EKG  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 297 RLLERAAKMSDEKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYSGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 357 AINVGLSVSRVGGAAQIKGTKQVAGTLRLDLAQYRELQ---AFSQFASDLDEASRKQLER 413

Query: 410 VPIIYDFLKQSP 421
              + + LKQ P
Sbjct: 414 GQRMVEVLKQPP 425


>gi|55824828|gb|AAV66496.1| F1-ATPase alpha subunit [Alonsoa sp. JPM-2004]
          Length = 413

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|144900259|emb|CAM77123.1| flagellum-specific ATP synthase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 450

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 172/422 (40%), Positives = 254/422 (60%), Gaps = 5/422 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +   G ++ +  +      + + + +GD   V          + +        + P    
Sbjct: 18  IQVYGRVAGVQGMLIEAGGVQRQISVGDRCHVVARDGRRVPCEAVGFRNGRALLMPFTAI 77

Query: 79  EEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + I LG     H     + PS  W GRVINA  +P+DG   L  GD    I +  P A +
Sbjct: 78  DGIGLGCRTEVHESEPVVHPSDAWLGRVINAFAQPVDGLGPLPLGDNPYPIRATPPSAHS 137

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           RQRV      G+R ++ F  +C GQR+G+FAGSG+GKS++LSM A++   D  II L+GE
Sbjct: 138 RQRVAGKVDLGVRAVNSFLTMCRGQRMGIFAGSGVGKSSILSMMAKNTSCDVSIIGLIGE 197

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE REFI +D   + +K+SVVVV+TSDESP++R+ A    +++AEYF  +G +VL ++
Sbjct: 198 RGREAREFIEDDLGEEGMKRSVVVVSTSDESPLMRRQAAYLTLSVAEYFRDQGKDVLCMM 257

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI+ ++GE P ++GY  +VF+ELPRLLER GP    KG+IT + +VLVD
Sbjct: 258 DSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERAGPGTG-KGSITGLFTVLVD 316

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+HN+PI+D+VR ILDGHIVL+R++A+ GRYP V+ L SVSR      +  E  LVS  
Sbjct: 317 GDDHNEPISDAVRGILDGHIVLDRAIADRGRYPAVNILRSVSRTMPGCNNEQENALVSRA 376

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435
             L+  +E+  ++  +G YR G D  +D+A+H  P+I   L Q   D +S  D + ++ +
Sbjct: 377 RKLLATYEDMAELIRLGAYRKGTDPAVDEAIHYYPMIEKLLTQGKKDATSLRDCYAQLAQ 436

Query: 436 KL 437
            L
Sbjct: 437 VL 438


>gi|302850070|ref|XP_002956563.1| F1F0 ATP synthase, subunit alpha, mitochondrial [Volvox carteri f.
           nagariensis]
 gi|300258090|gb|EFJ42330.1| F1F0 ATP synthase, subunit alpha, mitochondrial [Volvox carteri f.
           nagariensis]
          Length = 569

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 101/437 (23%), Positives = 184/437 (42%), Gaps = 23/437 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +K +  + +  + Y    V+  G + S+      V  L + V  G+ V     +S   G 
Sbjct: 74  EKLIPAVKEWEKQYQPP-VIHLGRVLSVGDGIARVYGL-KSVQAGELVCF---DSGVKGM 128

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V +   G    I  GDLV+  G+   +       GRV++ALG+PIDG   L 
Sbjct: 129 ALNLQADHVGVVVFGNDSLIHQGDLVYRTGQIVNVPVGPGTLGRVVDALGQPIDGKGPLT 188

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG------- 173
               S+ +  K P  + RQ V +   TG++ +D   P+  GQR  +      G       
Sbjct: 189 NVKSSL-VEIKAPGIIARQSVREPLYTGVKAVDALVPIGRGQRELIIGDRQTGKTAIAVD 247

Query: 174 ---KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPI 229
                  L+           I   +G++   V + ++ +      K +++V AT+ ++  
Sbjct: 248 CILHQNYLNGITSRKNRVYCIYVAIGQKRSTVAQLVKLFGQTGALKYTIIVSATASDAAP 307

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +   +AEYF   G + ++I D +++ + + R+++      P    +P  VF  
Sbjct: 308 LQFLAPYSGCAMAEYFRDNGKHAVIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYL 367

Query: 290 LPRLLERIGPSE--KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER          G++TA   +     + +  IA +V SI DG I L   L  +G 
Sbjct: 368 HSRLLERAAKMSAAMGGGSLTAFPVIETQAGDVSAYIATNVISITDGQIFLETELFYKGI 427

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      +
Sbjct: 428 RPALNVGLSVSRVGSAAQFPGMKQVAGTLKLELAQYRE---VAAFAQFGSDLDAATQYVL 484

Query: 408 HQVPIIYDFLKQSPSDL 424
            +   + + LKQ   + 
Sbjct: 485 ERGARLTEVLKQRQFNP 501


>gi|82751706|ref|YP_417447.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus RF122]
 gi|124007215|sp|Q2YUJ9|ATPA_STAAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|82657237|emb|CAI81678.1| ATP synthase alpha chain [Staphylococcus aureus RF122]
          Length = 502

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G    I+ GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYAGITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTASKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|83719626|ref|YP_443802.1| F0F1 ATP synthase subunit alpha [Burkholderia thailandensis E264]
 gi|167582836|ref|ZP_02375710.1| F0F1 ATP synthase subunit alpha [Burkholderia thailandensis TXDOH]
 gi|167620976|ref|ZP_02389607.1| F0F1 ATP synthase subunit alpha [Burkholderia thailandensis Bt4]
 gi|115312222|sp|Q2STE7|ATPA1_BURTA RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|83653451|gb|ABC37514.1| ATP synthase F1, alpha subunit [Burkholderia thailandensis E264]
          Length = 513

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 186/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|253729554|ref|YP_003029737.1| AtpA [Bambusa oldhamii]
 gi|255961380|ref|YP_003097573.1| ATP synthase CF1 subunit alpha [Dendrocalamus latiflorus]
 gi|246367064|gb|ACS94675.1| AtpA [Bambusa oldhamii]
 gi|255040257|gb|ACT99917.1| ATP synthase CF1 subunit alpha [Dendrocalamus latiflorus]
          Length = 507

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/431 (24%), Positives = 184/431 (42%), Gaps = 15/431 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSPSDLSSED 428
           KQS S+    +
Sbjct: 422 KQSQSNPLPVE 432


>gi|219856598|ref|YP_002473720.1| hypothetical protein CKR_3255 [Clostridium kluyveri NBRC 12016]
 gi|254807689|sp|B9DX63|ATPA_CLOK1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219570322|dbj|BAH08306.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 504

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 179/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    E Y K +  V  G I  I      V  L+     G+ +       D     + 
Sbjct: 10  SIIKSQIEKYEKKIETVDSGTIIQIGDGIARVYGLN-GCMAGELLEFPN---DVYAMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G+ V   G+   +       GRV+N+LG PIDG  ++   +
Sbjct: 66  LEQDNVGCVLLGSQEGIKEGNTVKRTGKVVEVPVGENIIGRVVNSLGHPIDGKGAISTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 -TRAVELVAPGVITRQAVKQPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAMDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   + + +  + +  ++VV A + ES  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNNLIETNAMDYTIVVSAAASESAPLQYIAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF +KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMNKGKDVLIVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     +    I  +V SI DG I L   L   G+ P ++   SVS
Sbjct: 305 SDKLGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFYSGQRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVAGTLRIDLAQYRE---LASFAQFGSDLDKESKRTLEKGKRLTEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|121533760|ref|ZP_01665587.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans
           Nor1]
 gi|121307751|gb|EAX48666.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans
           Nor1]
          Length = 439

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 163/414 (39%), Positives = 234/414 (56%), Gaps = 9/414 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYI 72
            S   +   G I+ I  +   +      V LG+      +        +V+    + V +
Sbjct: 14  KSAETMRLNGKITQIIGLV--IESRGPSVNLGELCYIHPRSGGKPIPAEVVGFRPNHVLL 71

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P+G  E I  G  V    R  ++       GRV++ LG PIDG   +        + + 
Sbjct: 72  MPIGELEGIGPGCSVIAANRTLKVGVGPDLLGRVLDGLGNPIDGKGPVATA-AEYPLHAL 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP ++R+R+ +    G+R ID F  L  GQR+G+ AGSG+GKSTLL M AR+   D  +
Sbjct: 131 PPPPLSRRRITEPLSVGVRAIDGFLTLGRGQRVGIMAGSGVGKSTLLGMIARNTEADISV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREVREFI  D   D LK+SVVVVATSD+  ++R    +TA  IAE+F  +G 
Sbjct: 191 IALIGERGREVREFIERDLGEDGLKRSVVVVATSDQPALVRIKGAMTATAIAEFFRDQGK 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +V L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER G  +K  G+IT +
Sbjct: 251 DVTLMMDSVTRFAMAQREVGLTVGEPPATRGYTPSVFAMLPKLLERSGTGDK--GSITGI 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL DGD+ N+PIAD+VRSILDGHIVL+R LA +  YP +D LASVSR+       +  
Sbjct: 309 YTVLADGDDMNEPIADAVRSILDGHIVLSRDLAAQNHYPAIDVLASVSRVMLDIVDKEHW 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           +    L  ++  + E  D+  IG Y  G +  +D+AV  +  +  FL+Q   ++
Sbjct: 369 QAAQKLRSVLATYHEAEDLINIGAYAAGSNPRIDQAVRLIDGVRRFLRQDVHEM 422


>gi|304438475|ref|ZP_07398415.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304368558|gb|EFM22243.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 458

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 167/420 (39%), Positives = 240/420 (57%), Gaps = 13/420 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV---VHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
            G ++ I  +   +      V +G+      H         +V+      V + PVG  +
Sbjct: 32  TGKVTQIIGLV--IESQGPTVTVGELCYVSSHFAGMPPVPAEVVGFREGSVLLMPVGEMQ 89

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   GR  R+       GRV++ LG PIDG   +   +    + +  PP + R
Sbjct: 90  GIGPGCEVVATGRQLRVKVGMELLGRVLDGLGNPIDGKGPILAKE-EYPLQAPPPPPLTR 148

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            R+      G+R ID    +  GQRIG+ AGSG+GKSTLLSM AR+   D  +I+LVGER
Sbjct: 149 PRIHDNLYVGVRAIDGLITMGDGQRIGIMAGSGVGKSTLLSMIARNTEADISVITLVGER 208

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVR+FI  D   + LK+SVVVVATSD+  ++R    +T   IAEYF  +G  V+L++D
Sbjct: 209 GREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFRDQGRKVVLMMD 268

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G SEK  G+IT + +VLVDG
Sbjct: 269 SVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTSEK--GSITGIYTVLVDG 326

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L+SVSR+  +  + +  +    + 
Sbjct: 327 DDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLSSVSRVMYEVVAKNHLEAAQEMR 386

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  ++E  D+  IG Y  G    +D A+ ++  I DFL Q   +++S   + E  ++L
Sbjct: 387 QLMAVYQEAEDLIHIGAYVKGSSPKIDAAIQKIDGINDFLCQGIYEVTS---YAETEQQL 443


>gi|307725651|ref|YP_003908864.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1003]
 gi|307586176|gb|ADN59573.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia sp. CCGE1003]
          Length = 467

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 166/438 (37%), Positives = 249/438 (56%), Gaps = 14/438 (3%)

Query: 6   ETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQ 61
           + LA   E    S   + + G +  +      V  L   V LG+    +  N   L   +
Sbjct: 29  QRLADAIEHEILSTPSIARTGKVLEVIGTLVKVAGLD--VTLGELCELRAANGALLQHAE 86

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI    D+  + P     +IS    V   GR   +       GRVI++LG+PIDG   L 
Sbjct: 87  VIGFTRDVALLSPFSRLADISRSTRVVGLGRSLTVPVGDTLLGRVIDSLGEPIDGLGPLE 146

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +    + +  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL M
Sbjct: 147 ATEQR-PVFANPPSPMSRRMIDTPLATGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLLGM 205

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
           FAR    D  +I+L+GERGREVREF+E  LG + + +SVVV ATSD S I R  A   A 
Sbjct: 206 FARGAQCDVAVIALIGERGREVREFVELILGPEGMARSVVVCATSDRSSIERAKAAYVAT 265

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE+F  +G  VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G 
Sbjct: 266 AIAEHFRDRGQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGM 325

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+ITA+ +VL + ++ NDPIA+ VR I+DGH++L+R +A + +YP +D LAS+SR
Sbjct: 326 GE--HGSITALYTVLAEDESGNDPIAEEVRGIVDGHMILSREIAAKNQYPAIDVLASLSR 383

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +  + +  +  + L  L+ +  E   +  IG Y+PG + + D+A+ ++  I  F  Q
Sbjct: 384 VMPQVMTPEYVRAAARLRELLAKHREVELLLQIGEYQPGGNPLADEAIRKIDAIRAFFNQ 443

Query: 420 SPSDLSSEDVFQEITKKL 437
           +  +L++    Q+   +L
Sbjct: 444 ATHELAAP---QDTEARL 458


>gi|83747851|ref|ZP_00944884.1| HrcN [Ralstonia solanacearum UW551]
 gi|207724591|ref|YP_002254988.1| hrp protein hrcn [Ralstonia solanacearum MolK2]
 gi|207739226|ref|YP_002257619.1| hrp protein hrcn [Ralstonia solanacearum IPO1609]
 gi|83725498|gb|EAP72643.1| HrcN [Ralstonia solanacearum UW551]
 gi|206589813|emb|CAQ36774.1| hrp conserved protein hrcn [Ralstonia solanacearum MolK2]
 gi|206592599|emb|CAQ59505.1| hrp conserved protein hrcn [Ralstonia solanacearum IPO1609]
          Length = 439

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 158/437 (36%), Positives = 237/437 (54%), Gaps = 11/437 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQV 62
           LE+L   A   +  L+ + G +  +T     V  +   V LG+       +   +  G+V
Sbjct: 7   LESLESAA--RTAPLIRRFGKVVEVTGTLLRVGGVD--VRLGELCTLTEADGTVMQEGEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  +     + P      +S    V   GR   +       GRV++ LG+P DG   L  
Sbjct: 63  VGFSEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPPLDV 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            +  + + +  P  M R+ VE    TG+RVID    L  GQR+G+FA +G+GKSTL+ MF
Sbjct: 123 VE-HVPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMF 181

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I L+GERGREVREFI +    + +++SVVV ATSD S + R  A      
Sbjct: 182 ARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAHVGTA 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G S
Sbjct: 242 VAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMS 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L S+SR+
Sbjct: 302 S--AGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRV 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +       +  L+ ++ E   +  +G Y+ G D + D AV     +  FL+Q 
Sbjct: 360 MTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMEGFLRQR 419

Query: 421 PSDLSSEDVFQEITKKL 437
             +  S D  + +  ++
Sbjct: 420 TDEWCSPDETRRLLDEI 436


>gi|254421647|ref|ZP_05035365.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
 gi|196189136|gb|EDX84100.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
          Length = 504

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++     G +  +      +  L   +  G+ +     +   +G  + 
Sbjct: 11  SIIQQQIEQYDQDVKADSVGTVLQVGDGIARIYGLDNTMA-GELLEF---DDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G ++  G  V   G+   +       GRVI+ LG+PIDG   +   +
Sbjct: 67  LEEDNVGAVMMGTGRQVLEGSTVKSTGKIASVPVGESMLGRVIDTLGRPIDGKGDINTSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 SRL-IESMAPGIIERKSVYEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     +   +G++   V + I           +VVV A +++   L+ +AP T   
Sbjct: 186 NQADQDVICVYVAIGQKASSVAQVIGVLEERGALDYTVVVAANANDPAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLIIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFFLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E  +G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SPELGEGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   +   + +F+E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAIKKVAGKVKLELAQFDELQ---AFAQFASDLDPATQAQLAKGQRLREILK 422

Query: 419 QSPSDLSS 426
           Q      S
Sbjct: 423 QPQYSPRS 430


>gi|552976|gb|AAA84725.1| ATP synthase alpha subunit [Triticum aestivum]
          Length = 504

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + + +L E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKIVRELIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIPQIPVSEAYLGRVVNALAKPIDGKGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQGVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|224823530|ref|ZP_03696639.1| ATP synthase F1, alpha subunit [Lutiella nitroferrum 2002]
 gi|224603985|gb|EEG10159.1| ATP synthase F1, alpha subunit [Lutiella nitroferrum 2002]
          Length = 514

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 112/444 (25%), Positives = 189/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL         G + S+T     V  L+  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKAKIQNLAEGSETRTKGTVISVTDGIVRVHGLAD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVILGEYEHISEGDEVKCTGRILEVPVGPELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L    LS  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPLN-AKLSSPIEKIAPGVIARKSVDQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +       I   VG++   +   +           ++VV A + E+  L+
Sbjct: 176 TAVALDAIINQKGTGVICIYVAVGQKASSIANVVRKLEEHGAMGHTIVVAAAASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF   G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYSGCTMGEYFRDSGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E+             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRINEEEVEKLTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    I+ + +KQ   
Sbjct: 413 LDEATRKQLQHGEIVTELMKQKQF 436


>gi|312869600|ref|ZP_07729751.1| ATP synthase F1, alpha subunit [Lactobacillus oris PB013-T2-3]
 gi|311094886|gb|EFQ53179.1| ATP synthase F1, alpha subunit [Lactobacillus oris PB013-T2-3]
          Length = 510

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 177/437 (40%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +    N      V + G ++ +         L + V  G+ +      
Sbjct: 1   MSIKTEEISSLIKKQLANYQNQVSVEETGTVTYVGDGVARADGL-ENVMAGELLEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G    I  GD V   GR   +       GRV++ LG+PID
Sbjct: 59  --VYGMAQNLESNDVGIVILGDFSGIREGDTVKRTGRIMEVPVGDELLGRVVDPLGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  I  K P  M R+ V    +TGI+VID   P+  GQR  +      GK
Sbjct: 117 GLGEI-KTTKTRPIERKAPGVMERKSVSVPLQTGIKVIDALVPIGRGQRELIIGDRKTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   VR  +E          ++VV A++     + 
Sbjct: 176 TAIALDTIINQKDQDVICIYVAIGQKESTVRANVETLRRYGALDYTIVVSASASNPAPML 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL+I D +++ A + RE++      P    YP  +F    
Sbjct: 236 YIAPYAGAAMGEEFMFGGKDVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L+      G+ P
Sbjct: 296 RLLERAARLSDDLGGGSMTALPIIQTQAGDVSAYIPTNVISITDGQIFLDSDEFYAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     KK+  +L   I  + E   +     +   +D      + +
Sbjct: 356 AIDAGTSVSRVGGDAQVKAMKKVAGTLRLDIASYNE---LASFAQFGSDLDEATQAKLAR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
                + LKQ   +  +
Sbjct: 413 GQRTMEVLKQGLHEPQT 429


>gi|317133485|ref|YP_004092799.1| ATPase, FliI/YscN family [Ethanoligenens harbinense YUAN-3]
 gi|315471464|gb|ADU28068.1| ATPase, FliI/YscN family [Ethanoligenens harbinense YUAN-3]
          Length = 433

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 156/434 (35%), Positives = 236/434 (54%), Gaps = 10/434 (2%)

Query: 8   LAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIR 64
           L Q  E   + +L V  G +  +T    +V  +   V +G+             + +V+ 
Sbjct: 2   LQQAIETIRAADLTVSRGRVERVTG--LSVESVGPAVRIGEVCRIFPNTGGRPVMAEVVG 59

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
                + + P    + +  G +V   G  F +       GRV++ +G PIDG   +   +
Sbjct: 60  FRDKSMLLMPYDNLQGVGPGSVVESTGHSFYVPVGMDMVGRVLDGVGTPIDGKGPI-ASE 118

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  +    + R R+++    G++VID       GQRIG+FAGSG+GKSTL+ M AR
Sbjct: 119 AHYLIDVEPANPLQRPRIKERMPLGVKVIDGLLTCGKGQRIGIFAGSGVGKSTLMGMIAR 178

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D  +I+LVGERGRE+R+F+ +D   + + ++V+VVATSD   + R    L A  +A
Sbjct: 179 NAQADVNVIALVGERGRELRDFMEKDLQAEGMARTVLVVATSDRPAMARVKCALVATAVA 238

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  KG NV+L++DS+TRFA + REI   +GE PVARGY  S+F+ +P+LLER G   K
Sbjct: 239 EFFRDKGKNVMLMMDSLTRFAMAQREIGLATGEPPVARGYTPSIFAVMPKLLERSGNFNK 298

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT + +VLV+GD+ N+P+AD+VR ILDGHIVL R+LA    YP +D LAS+SRL  
Sbjct: 299 --GSITGIYTVLVEGDDMNEPVADTVRGILDGHIVLTRALAMRNHYPAIDVLASISRLMP 356

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                   +L   +  L+  +E   D+  IG Y+PG    +D A+     I  FL Q   
Sbjct: 357 DIADPAHMELAGKMRRLMATYENYADLISIGAYKPGSSEEVDTAIRYHKAIETFLCQRVG 416

Query: 423 DLSSEDVFQEITKK 436
           +  S     +  ++
Sbjct: 417 EPFSFSRTIDAMRQ 430


>gi|39546133|gb|AAR28050.1| ATP synthase alpha subunit [Sagittaria latifolia]
          Length = 424

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 100/410 (24%), Positives = 175/410 (42%), Gaps = 22/410 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L Q    G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLKQIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  SL + +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKSLLGRVVDALGVPIDGKGSLSENE-RRRVEVKAPGIIERRSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGE 197
           G++ +D   P+  GQR  +      GK+ +          L+  A+ +     +   +G+
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNKKAKENDKLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER     +E   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           SL   + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNKGERLTEVLKQPQYEP 402


>gi|259503684|ref|ZP_05746586.1| ATP synthase F1 [Lactobacillus antri DSM 16041]
 gi|259168316|gb|EEW52811.1| ATP synthase F1 [Lactobacillus antri DSM 16041]
          Length = 510

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 177/437 (40%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +    N      V + G ++ +         L + V  G+ +      
Sbjct: 1   MSIKTEEISSLIKKQLANYQNQVSVEETGTVTYVGDGVARADGL-ENVMAGELLEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G    I  GD V   GR   +       GRV++ LG+PID
Sbjct: 59  --VYGMAQNLESNDVGIVILGDFSGIREGDTVKRTGRIMEVPVGDELLGRVVDPLGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   +  I  K P  M R+ V    +TGI+VID   P+  GQR  +      GK
Sbjct: 117 GLGEI-KTTKTRPIERKAPGVMERKSVSVPLQTGIKVIDALVPIGRGQRELIIGDRKTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   VR  +E          ++VV A++     + 
Sbjct: 176 TAIALDTIINQKDQDVICIYVAIGQKESTVRANVETLRRYGALDYTIVVSASASNPAPML 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL+I D +++ A + RE++      P    YP  +F    
Sbjct: 236 YIAPYAGAAMGEEFMFGGKDVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L+      G+ P
Sbjct: 296 RLLERAARLSDDLGGGSMTALPIIQTQAGDVSAYIPTNVISITDGQIFLDSDEFYAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     KK+  +L   I  + E   +     +   +D      + +
Sbjct: 356 AIDAGTSVSRVGGDAQVKAMKKVAGTLRLDIASYNE---LASFAQFGSDLDEATQAKLAR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
                + LKQ   +  +
Sbjct: 413 GQRTMEVLKQGLHEPQT 429


>gi|167587930|ref|ZP_02380318.1| F0F1 ATP synthase subunit alpha [Burkholderia ubonensis Bu]
          Length = 513

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/446 (24%), Positives = 184/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDTIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|228994026|ref|ZP_04153927.1| ATP synthase subunit alpha [Bacillus pseudomycoides DSM 12442]
 gi|228765674|gb|EEM14327.1| ATP synthase subunit alpha [Bacillus pseudomycoides DSM 12442]
          Length = 502

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTT- 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 125 STRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E        + ++VV A++ +   L  +A    VT
Sbjct: 185 NQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAAYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDARGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A      K+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMSKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|55976892|gb|AAV68295.1| F1-ATPase alpha subunit [Sapria poilanei]
          Length = 419

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVDGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVLFGSETAIQE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIFNQKQMNSKATSESETLSCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|11467189|ref|NP_043022.1| ATP synthase CF1 alpha subunit [Zea mays]
 gi|114518|sp|P05022|ATPA_MAIZE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|12403|emb|CAA28876.1| unnamed protein product [Zea mays]
 gi|552733|gb|AAA84474.1| phosphorylation coupling factor proteolipid subunit (atpH) [Zea
           mays]
 gi|902219|emb|CAA60283.1| ATPase subunit alpha [Zea mays]
          Length = 507

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/430 (23%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  + 
Sbjct: 11  KILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    Y   VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYLGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++       + +F E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS S+    +
Sbjct: 423 QSQSNPLPVE 432


>gi|266624717|ref|ZP_06117652.1| ATP synthase F1, alpha subunit [Clostridium hathewayi DSM 13479]
 gi|288863416|gb|EFC95714.1| ATP synthase F1, alpha subunit [Clostridium hathewayi DSM 13479]
          Length = 500

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 185/444 (41%), Gaps = 21/444 (4%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E YS  L V   G +  +      +  L +    G+ +   G   +  G V+ 
Sbjct: 10  SVIKEQIERYSTKLEVSDVGTVIQVADGIARIHGL-ENAMQGELLEFPG---EIYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G +IS GD V   GR   +       GRV+NALG+P+DG   + + D
Sbjct: 66  LEEDNVGAVLLGAG-DISEGDTVKTTGRVVEVPVGDAMTGRVVNALGQPVDGKGPV-QTD 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 124 KFRQIERVAHGVIDRKSVDTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 183

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          + +VV+T+ +   L+ +AP +   
Sbjct: 184 NQRGQGVHCIYVAIGQKASTVATIVKTLEEYGAMDYTTIVVSTASDLAPLQYIAPYSGCA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +   G++VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 244 IGEEWMENGEDVLVVYDDLSKHAAAYRTLSLLLKRPPGREAYPGDVFYLHSRLLERASKL 303

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   +   G  P ++   SVS
Sbjct: 304 SDALGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRPAINAGLSVS 363

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+ + +   + ++ E   +     +   +D    + + Q   I + LK
Sbjct: 364 RVGGAAQIKAMKKIAAPIRVELAQYRE---LASFAQFGSELDKETTEQLAQGERIKEVLK 420

Query: 419 QS-----PSDLSSEDVFQEITKKL 437
           Q      P +     +F    K L
Sbjct: 421 QGQYQPMPVEYQVMIIFAATRKLL 444


>gi|227529635|ref|ZP_03959684.1| ATP synthase F1, alpha subunit [Lactobacillus vaginalis ATCC 49540]
 gi|227350425|gb|EEJ40716.1| ATP synthase F1, alpha subunit [Lactobacillus vaginalis ATCC 49540]
          Length = 511

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 175/426 (41%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA    K  V + G ++ +         L +    G+ +          G    +  +
Sbjct: 14  KQLANYQDKVSVEETGTVTYVGDGVARADGL-ENAMAGELLEFSNG---VYGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G    I  GD V   GR   +       GRV+++LG+PIDG   + K D +  
Sbjct: 70  DVGIVILGDFSGIREGDTVKRTGRIMEVPVGDALLGRVVDSLGRPIDGLGEI-KTDKTRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSD 185
           I  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK+ +   ++  + D
Sbjct: 129 IEKKAPGVMERKSVSEPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTAIALDTIINQKD 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G++   VR  +E          +++V A++     +  +AP     + E 
Sbjct: 189 KDVICIYVAIGQKESTVRANVETLRRYGALDYTIIVSASASNPAPMLYIAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  +F    RLLER      + 
Sbjct: 249 FMYGGKDVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I LN      G+ P +D   SVSR+  
Sbjct: 309 GGGSMTALPIIQTQAGDVSAYIPTNVISITDGQIFLNSDEFYAGQRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   I  + E   +     +   +D      + +     + LKQ   
Sbjct: 369 DAQVKAMKKVAGTLRLDIASYNE---LASFAQFGSDLDEATQAKLSRGKHTMELLKQGLH 425

Query: 423 DLSSED 428
                +
Sbjct: 426 QPQPVE 431


>gi|118430385|ref|YP_874650.1| ATP synthase CF1 alpha subunit [Hordeum vulgare subsp. vulgare]
 gi|190358176|sp|A1E9I8|ATPA_HORVU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|118201039|gb|ABK79410.1| ATP synthase CF1 alpha subunit [Hordeum vulgare subsp. vulgare]
          Length = 504

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVQFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRV+NAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVVNALAKPIDGKGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQGVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|194033146|ref|YP_002000484.1| ATP synthase CF1 alpha subunit [Brachypodium distachyon]
 gi|193075554|gb|ACF08637.1| ATPase alpha subunit [Brachypodium distachyon]
          Length = 505

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 107/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L Q +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKIGIENIGRVVQVGDGIARIIGLGQIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|297621830|ref|YP_003709967.1| type III secretion cytoplasmic ATPase SctN [Waddlia chondrophila
           WSU 86-1044]
 gi|297377131|gb|ADI38961.1| type III secretion cytoplasmic ATPase SctN [Waddlia chondrophila
           WSU 86-1044]
          Length = 438

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 162/431 (37%), Positives = 237/431 (54%), Gaps = 9/431 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           L E     L    G I+    +   +  +   V +G+  + + +      +V+    D V
Sbjct: 11  LRELDEVQLTTVNGRITETVGML--IKAVVPQVKIGEVCLIKREGEPLRAEVVGFTRDEV 68

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSME 127
           ++ P+G    I     V        +       GRV+N LG+P+D      L   + +  
Sbjct: 69  FLSPLGEMTGIGPSSEVIPTRLPLHVKVGDALLGRVLNGLGEPLDTNTKGPLVLNE-TAP 127

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           ++   P  + RQRV +    G+RVID       GQR+G+FA +G GKSTLL M AR+   
Sbjct: 128 VIQSPPDPLKRQRVSEPISVGVRVIDGTLTTGLGQRVGIFAAAGGGKSTLLGMIARNADA 187

Query: 188 DKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +ISLVGERGRE+R+FI +D   + LKKSV+V++TSD+S  LR  A   A  IAEYF 
Sbjct: 188 DINVISLVGERGRELRDFIEKDLGPEGLKKSVLVISTSDQSAQLRLNAAYVATAIAEYFR 247

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            KG +V+L++DS+TRFA +IRE+   +GE P   GY  SVFS LP+LLER G S+   G+
Sbjct: 248 DKGKSVILMMDSVTRFARAIREVGLAAGEPPARAGYTPSVFSTLPKLLERSGRSDV--GS 305

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  ++LV GD+ N+P+AD VRSILDGHI+L+  LA +  YP VD LAS SR+     S
Sbjct: 306 ITAFYTILVAGDDMNEPVADEVRSILDGHIILSAELAHKYHYPAVDVLASKSRVMQTIVS 365

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   L   +  ++  +++   +  IG Y+ G D   D A+  +  + +FLKQ   +  S
Sbjct: 366 EEHLSLAGKINEVLANYKKNELLIKIGEYKRGSDKAGDFAIDHIDKVNNFLKQGIEEECS 425

Query: 427 EDVFQEITKKL 437
            D   ++ + L
Sbjct: 426 WDETMQLLRSL 436


>gi|259482031|tpe|CBF76119.1| TPA: hypothetical protein similar to ATP synthase alpha chain
           (Broad) [Aspergillus nidulans FGSC A4]
          Length = 561

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 102/434 (23%), Positives = 184/434 (42%), Gaps = 27/434 (6%)

Query: 7   TLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
            ++ L E   + L     + + G++ S+         L+  V   + V  +   S   G 
Sbjct: 59  EISSLLEQRIRGLKGSPNLAESGHVLSVCDGIVRARGLT-NVQAEELVEFE---SGVKGM 114

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
            + +  + V I   G    +   + V+  G    +       GRV++ALG PIDG   + 
Sbjct: 115 CMNLESNHVGIVLFGSDRLVKQSEPVWRTGEIVDVPVGPKMLGRVVDALGNPIDGKGPIE 174

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----S 175
             + S   + K P  + R+ V +  +TG++ ID   P+  GQR  +      GK      
Sbjct: 175 TTERSRAQI-KAPGILPRRSVNQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAIALD 233

Query: 176 TLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPI 229
           T+L+    +   D       +   VG++   V + ++    ++  K S+VV AT+ E+  
Sbjct: 234 TILNQKIWNKSDDESKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAP 293

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP     + E+F   G + ++I D +++ A + R+++      P    YP  VF  
Sbjct: 294 LQYIAPFAGCAMGEWFRDHGRHAIIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYL 353

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +   G++TA+  +   G + +  I  +V SI DG I L   L   G 
Sbjct: 354 HSRLLERAAKLNDKHGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIYLESELFNRGI 413

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K++  SL   + ++ E   I     +   +D    + +
Sbjct: 414 RPAINVGLSVSRVGSAAQVRAMKQVAGSLKLYLAQYRE---IAAFSQFGSDLDAATKQTL 470

Query: 408 HQVPIIYDFLKQSP 421
            +   + + LKQ  
Sbjct: 471 RRGEHLTELLKQKQ 484


>gi|260576486|ref|ZP_05844476.1| ATP synthase F1, alpha subunit [Rhodobacter sp. SW2]
 gi|259021369|gb|EEW24675.1| ATP synthase F1, alpha subunit [Rhodobacter sp. SW2]
          Length = 512

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 102/438 (23%), Positives = 178/438 (40%), Gaps = 25/438 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  +++ K+  V + G + S+      V  L   V  G+ V   G      G  + 
Sbjct: 10  AILKEQIKNFGKDAEVAEVGRVLSVGDGIARVHGL-DNVQAGEMVEFPGG---IRGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           + +D V I   G    I  GD V         P      GRV++ LG PIDG   +   +
Sbjct: 66  LEVDNVGIVIFGDDRSIKEGDTVKRTKSIVDVPAGNALLGRVVDGLGNPIDGKGPIAATE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             +    K P  + RQ V +   TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 126 RRVA-DVKAPGIIPRQSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAIALDTIL 184

Query: 184 SDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           +                  I   +G++   V + ++       +  ++VV AT+ +   +
Sbjct: 185 NQKSYNEAAGSDESKKLYCIYVAIGQKRSTVAQLVKKLEATGAIDYTIVVAATASDPAPM 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP  A  IAE+F   G + L+I D +++ A + R+++      P    YP  VF   
Sbjct: 245 QFLAPYAATAIAEFFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 304

Query: 291 PRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     K+ G+   TA+  +   G + +  I  +V SI DG I L   L  +G  
Sbjct: 305 SRLLERSAKLNKDNGSGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQGIR 364

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D      ++
Sbjct: 365 PAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDLDASTQALLN 421

Query: 409 QVPIIYDFLKQSPSDLSS 426
           +   + + +KQ      S
Sbjct: 422 RGARLTELMKQPQYAPLS 439


>gi|149277102|ref|ZP_01883244.1| F0F1 ATP synthase subunit alpha [Pedobacter sp. BAL39]
 gi|149231979|gb|EDM37356.1| F0F1 ATP synthase subunit alpha [Pedobacter sp. BAL39]
          Length = 524

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 107/442 (24%), Positives = 172/442 (38%), Gaps = 36/442 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   S+  + + G +  +      V  L++ V  G+ V  +       G V+ +  D 
Sbjct: 16  QLAGFKSEAELEEVGTVLQVGDGIARVYGLTK-VQSGELVEFENG---LQGIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  + I  GD +    +   I       GRV+N LG+PIDG   +      M I
Sbjct: 72  VGVVLLGPSDTIKEGDTIKRTKKIASIKVGEGMLGRVVNTLGEPIDGKGPIIGQTYEMPI 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  + RQ V +  +TGI+ ID   P+  GQR  V     IGK+ +      +    
Sbjct: 132 ERKAPGVIYRQPVTEPLQTGIKAIDGMIPIGRGQRELVIGDRQIGKTAVCIDTIINQKEF 191

Query: 189 K-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I    G++   V   +     +     +VVV A++ E   L+  AP +   
Sbjct: 192 YEAGQPVFCIYVACGQKASTVANIVRTLEENGAMPYTVVVAASAAEPAPLQFYAPFSGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E+F   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEFFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKI 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 NSNDEIAQAMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLET 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +D
Sbjct: 372 NLFNSGIRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELE---AFSKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
                 + +     + LKQ   
Sbjct: 429 AATKSVLDKGSRNVEILKQGQF 450


>gi|163745698|ref|ZP_02153058.1| F0F1 ATP synthase subunit alpha [Oceanibulbus indolifex HEL-45]
 gi|161382516|gb|EDQ06925.1| F0F1 ATP synthase subunit alpha [Oceanibulbus indolifex HEL-45]
          Length = 512

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 100/433 (23%), Positives = 175/433 (40%), Gaps = 25/433 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    +D+ +   V + G + S+      V  L   V  G+ V   G      G  + 
Sbjct: 10  AILKDQIKDFGQETEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG---IQGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +   G   +I  GD V         P      GRV++ LG PIDG   +G   
Sbjct: 66  LEADNVGVVIFGSDRDIKEGDTVKRTNSIVDVPIGDELLGRVVDGLGNPIDGKGPIGATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 126 RGIA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAVALDAML 184

Query: 184 SDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
           +                  +   +G++   V + ++       +  S+VV AT+ E   +
Sbjct: 185 NQAQVNAAAGDDEGKKMYCVYVAIGQKRSTVAQLVKKLEETGAIDYSIVVAATASEPAPM 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP  A  +AE+F   G + L+I D +++ A S R+++      P    YP  VF   
Sbjct: 245 QFLAPYAATAMAEHFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAYPGDVFYLH 304

Query: 291 PRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +   G + +  I  +V SI DG I L   L  +G  
Sbjct: 305 SRLLERSAKLGDEAGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFYQGIR 364

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A +     +   +   + ++ E   +     +   +D    + ++
Sbjct: 365 PAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDLDASTQQLLN 421

Query: 409 QVPIIYDFLKQSP 421
           +   + + +KQ  
Sbjct: 422 RGARLTELMKQPQ 434


>gi|115349965|ref|YP_764384.1| CF1 alpha subunit of ATP synthase [Stigeoclonium helveticum]
 gi|122165163|sp|Q06SI2|ATPA_STIHE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|98990179|gb|ABF60146.1| CF1 alpha subunit of ATP synthase [Stigeoclonium helveticum]
          Length = 504

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/433 (24%), Positives = 188/433 (43%), Gaps = 19/433 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     E Y++ + VV  G +  +      +  L + V  G+ +  +   
Sbjct: 1   MKMRPEEISSIIMKQIEQYNQEVQVVNFGTVFQVGDGIARIYGLEK-VMAGELLEFEDG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G  + +    V    +G G +I  G  V   G+  +I+    + GRV+++L +PID
Sbjct: 59  --TIGIALNLEAKNVGAVLMGDGLKIKEGSKVRATGKVAQIAVGEGYLGRVVDSLARPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D  + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK
Sbjct: 117 GKGDIASDDTRL-IESPAPGIISRRSVHEPLQTGLIAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   V + +           +V+V A +D +  L+
Sbjct: 176 TAIAIDTILNQKGKNVICVYVAIGQKASSVAQVVNTLRERGALDYTVIVTANADSAATLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  TIAEYF     + L+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGATIAEYFMYTNRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  V     + +  I  +V SI DG I L+  +   G  P
Sbjct: 296 RLLERAAKLNDALGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  SL   + +FEE R       +   +D      + +
Sbjct: 356 AINVGISVSRVGSAAQPKAMKQVAGSLKLQLAQFEELR---AFSQFASDLDQATQNQLAR 412

Query: 410 VPIIYDFLKQSPS 422
              + + LKQ+ +
Sbjct: 413 GARLVEILKQAQN 425


>gi|56965611|ref|YP_177345.1| F0F1 ATP synthase subunit alpha [Bacillus clausii KSM-K16]
 gi|81600648|sp|Q5WB76|ATPA_BACSK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56911857|dbj|BAD66384.1| F0F1-type ATP synthase alpha chain [Bacillus clausii KSM-K16]
          Length = 504

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 181/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + +   + VQ  G +  +         L   V  G+ +     ++  +G    
Sbjct: 11  SLIKQQIDQFETTVNVQDVGTVIRVGDGIAFAHGL-DNVMAGELLEF---STGVMGMAQN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I  +G   +I  GD V   GR   +   +   GRV+N LG+P+DG   +    
Sbjct: 67  LEEDSVGIIILGPYTDIREGDEVKRTGRIMEVPVGSELLGRVVNPLGQPLDGLGPVHTSK 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 -TRPIESPAPGVMARKSVHEPLQTGIKSIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   V   +E        + ++VV A++ +   L  +AP T V+
Sbjct: 186 NQKDQDMICVYVAIGQKESTVSGVVETLRQRGALEYTIVVSASASDPAPLLFLAPYTGVS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 246 MAEEFMYNGKHVLVIYDDLSKQAAAYREMSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  I  +V SI DG + L   L   G  P V+P  SVS
Sbjct: 306 NDDLGGGSITALPFIETQAGDVSAYIPTNVISITDGQVFLQSDLFHSGVRPAVNPGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 366 RVGGSAQIKAMKKVAGTLRLDLAAYRELE---AFAQFGSDLDAATQARLNRGERTVELLK 422

Query: 419 QSPSDLSSED 428
           Q        +
Sbjct: 423 QDLHQPLPVE 432


>gi|170725976|ref|YP_001760002.1| flagellum-specific ATP synthase [Shewanella woodyi ATCC 51908]
 gi|169811323|gb|ACA85907.1| flagellar protein export ATPase FliI [Shewanella woodyi ATCC 51908]
          Length = 446

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 152/435 (34%), Positives = 240/435 (55%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  + Q +      +    G +  +  +    T       +G     +    + + +VI 
Sbjct: 9   LNRIKQQSGKVHPFIAEASGQLVRVVGLTLEATG--CRAPIGSLCSIETLAGELVAEVIG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + +++Y+ P+     +  G  V   G    ++      GRV++  G P+DG   L + D
Sbjct: 67  FDDELLYLMPIEELRGVLPGAKVTPLGEQSGLNVGLSLLGRVLDGNGLPLDGLGRL-QTD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 ++    ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QKAPRHAQSINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LGD    +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADVIVVGLVGERGREVKEFIEEILGDEGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGS 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRQLADSGHYPAIDIEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  + +  +  +   +++ RD+  IG Y  G D  +D ++   P +  FL+Q+  
Sbjct: 366 MVISPEHLEAMRRVKQVYSLYQQNRDLISIGAYTQGSDPRIDNSIRLQPAMNAFLRQTMK 425

Query: 423 DLSSEDVFQEITKKL 437
           +    D  + +  +L
Sbjct: 426 EAIRFDSSELMLSQL 440


>gi|53724014|ref|YP_104460.1| F0F1 ATP synthase subunit alpha [Burkholderia mallei ATCC 23344]
 gi|67643089|ref|ZP_00441838.1| ATP synthase F1, alpha subunit [Burkholderia mallei GB8 horse 4]
 gi|121600569|ref|YP_994636.1| F0F1 ATP synthase subunit alpha [Burkholderia mallei SAVP1]
 gi|124383830|ref|YP_001027569.1| F0F1 ATP synthase subunit alpha [Burkholderia mallei NCTC 10229]
 gi|126450916|ref|YP_001082533.1| F0F1 ATP synthase subunit alpha [Burkholderia mallei NCTC 10247]
 gi|167001252|ref|ZP_02267051.1| ATP synthase F1, alpha subunit [Burkholderia mallei PRL-20]
 gi|254201535|ref|ZP_04907899.1| ATP synthase F1, alpha subunit [Burkholderia mallei FMH]
 gi|254357425|ref|ZP_04973699.1| ATP synthase F1, alpha subunit [Burkholderia mallei 2002721280]
 gi|81684928|sp|Q62FR7|ATPA1_BURMA RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|166201653|sp|A2S6K0|ATPA_BURM9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358138|sp|A3MQJ7|ATPA1_BURM7 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|190358139|sp|A1V8T3|ATPA1_BURMS RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|52427437|gb|AAU48030.1| ATP synthase F1, alpha subunit [Burkholderia mallei ATCC 23344]
 gi|121229379|gb|ABM51897.1| ATP synthase F1, alpha subunit [Burkholderia mallei SAVP1]
 gi|124291850|gb|ABN01119.1| ATP synthase F1, alpha subunit [Burkholderia mallei NCTC 10229]
 gi|126243786|gb|ABO06879.1| ATP synthase F1, alpha subunit [Burkholderia mallei NCTC 10247]
 gi|147747429|gb|EDK54505.1| ATP synthase F1, alpha subunit [Burkholderia mallei FMH]
 gi|148026489|gb|EDK84574.1| ATP synthase F1, alpha subunit [Burkholderia mallei 2002721280]
 gi|238524338|gb|EEP87771.1| ATP synthase F1, alpha subunit [Burkholderia mallei GB8 horse 4]
 gi|243062877|gb|EES45063.1| ATP synthase F1, alpha subunit [Burkholderia mallei PRL-20]
          Length = 513

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 186/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVLDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|307697215|gb|ADN86062.1| ATP synthase CF1 alpha subunit [Chasmanthium latifolium]
          Length = 507

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/430 (23%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  + 
Sbjct: 11  KILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +
Sbjct: 67  LESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++       + +F E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELLK 422

Query: 419 QSPSDLSSED 428
           QS ++    +
Sbjct: 423 QSQANPLPVE 432


>gi|257870212|ref|ZP_05649865.1| H+ ATPase [Enterococcus gallinarum EG2]
 gi|257804376|gb|EEV33198.1| H+ ATPase [Enterococcus gallinarum EG2]
          Length = 518

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 172/426 (40%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIKNYQNELSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 66  LESNDVGIIILGEFESIREGDKVKRTGKIMEVPVGDALIGRVVNPLGQPIDGLGPID-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+T+      
Sbjct: 125 KSRPVEAAAPGVMQRKSVSEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTTIAIDTII 184

Query: 184 SDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQNMICIYVAIGQKDSTVRAQVETLRRYGALDYTIVVSAGASQPAPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L   L   G  P V    SVS
Sbjct: 305 SDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLENDLFYSGVRPAVAAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QKLHEP 427


>gi|121999210|ref|YP_001003997.1| F0F1 ATP synthase subunit alpha [Halorhodospira halophila SL1]
 gi|158514023|sp|A1WZT3|ATPA_HALHL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|121590615|gb|ABM63195.1| ATP synthase F1 subcomplex alpha subunit [Halorhodospira halophila
           SL1]
          Length = 513

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 184/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +N          G + S+      +  L+  V  G+ +      
Sbjct: 1   MQVNPSEISELIKRRIENFDAAAEARNEGTVVSVGDGICRIHGLAD-VMFGEMLEFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +  D V    +G  + I  G  V   GR   +       GRV++ALG+P D
Sbjct: 57  DDTFGMALNLERDSVGAVLLGDYQHIKEGATVKCTGRILEVPVGDAMLGRVVDALGRPTD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K + S  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTEGSEPIEKVAPGVITREGVDQPVQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +  D   K I   VG++   V   +           ++VV A + ES  ++
Sbjct: 176 TAVAVDAIINQKDSGIKCIYVAVGQKNSTVANVVRKLEEHGAMDNTIVVNAGASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G + L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFRDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRINAEEVERRTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGVRPAVNAGLSVSRVGGSAQTKIIKKLGGGVRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    + + +     + +KQ   +  S
Sbjct: 413 LDETTRQQLERGKRTMELMKQGQYEPQS 440


>gi|224365668|ref|YP_002608395.1| ATPase subunit 1 [Vitis vinifera]
 gi|209954192|emb|CAQ77653.1| ATPase subunit 1 [Vitis vinifera]
 gi|239764719|gb|ACS15190.1| ATPase subunit 1 [Vitis vinifera]
          Length = 509

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 176/439 (40%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N      V + G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRITNFYTNLKVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDC-----------FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKLLNSKATSDSETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVSKQPQ 435


>gi|55824830|gb|AAV66497.1| F1-ATPase alpha subunit [Myoporum sandwicense]
          Length = 413

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKALLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 401


>gi|22297978|ref|NP_681225.1| F0F1 ATP synthase subunit alpha [Thermosynechococcus elongatus
           BP-1]
 gi|81743749|sp|Q8DLP3|ATPA_THEEB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|22294156|dbj|BAC07987.1| H+-transporting ATP synthase alpha chain [Thermosynechococcus
           elongatus BP-1]
          Length = 503

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 176/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +++ V   G +  +      V  L + V   + V  +      +G  + 
Sbjct: 11  SIIRQQIEQYEQSIKVDNVGTVLQVGDGIARVYGLDK-VMASELVEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+   I       GRV++AL +PIDG   +    
Sbjct: 67  LEEDNVGVVLMGDGLSIEEGSTVRATGKIASIPVGEAAIGRVVDALMRPIDGKGEIHTTQ 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESPAPGIVQRKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           ++V+ A + +   L+ +AP T  T
Sbjct: 186 NQKGQDVICVYVAIGQKASSVAQVVNVLRERGALDYTIVIAANASDPAALQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G + L++ D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 VAEYFMYQGKHTLVVYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NDALGGGSMTALPVVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGLRPAINAGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F+E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFDELQ---AFAQFASDLDKATQNQLARGQRLREILK 422

Query: 419 QSP 421
           Q  
Sbjct: 423 QPQ 425


>gi|126274595|ref|XP_001387600.1| F1F0-ATPase complex, F1 alpha subunit [Scheffersomyces stipitis CBS
           6054]
 gi|126213470|gb|EAZ63577.1| F1F0-ATPase complex, F1 alpha subunit [Pichia stipitis CBS 6054]
          Length = 545

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 175/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+      +  L+      + V      S   G  + +  D V +   G    +
Sbjct: 64  ETGRVLSVGDGIARIFGLNNIQAE-ELVEFA---SGVKGMALNLEPDQVGVVLFGSDRLV 119

Query: 82  SLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G+ V   G+    P      GRV++ LG PIDG   L     S     K P  + R  
Sbjct: 120 KEGETVKRTGKIVDVPTGPELLGRVVDGLGNPIDGKGPLNASSSSRA-QVKAPGILPRTS 178

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    ++  D       
Sbjct: 179 VFEPMQTGLKSVDALVPVGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGADESKKLYC 238

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP TA  I E+F   G
Sbjct: 239 VYVAVGQKRSTVAQLVQTLEQNDALKYSIIVAATASEAAPLQYIAPFTACAIGEWFRDNG 298

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE--KEKGNI 307
            + L++ D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 299 KHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPVHGGGSL 358

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 359 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 418

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + +++   +   LKQ  
Sbjct: 419 AMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTQLLKQKQ 469


>gi|55824824|gb|AAV66494.1| F1-ATPase alpha subunit [Mentha spicata]
          Length = 413

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 172/409 (42%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQQQ 401


>gi|10955560|ref|NP_052401.1| type III secretion system ATPase [Yersinia enterocolitica]
 gi|732261|sp|P40290|YSCN_YEREN RecName: Full=Probable ATP synthase YscN; AltName: Full=Yop
           proteins secretion ATPase
 gi|4324347|gb|AAD16824.1| ATPase YscN [Yersinia enterocolitica W22703]
 gi|318608201|emb|CBY78175.1| type III secretion cytoplasmic ATP synthase (EC 3.6.3.14,
           YscN,SpaL,MxiB,HrcN,EscN) [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 439

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 161/427 (37%), Positives = 233/427 (54%), Gaps = 12/427 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYIC 73
              L+   G ++ +T        +   V +G+    +  ++      +VI        + 
Sbjct: 17  GSRLIQIRGRVTQVTGTLLK--AVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLI 74

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    IS    V   G   ++       G+V++ LG+P DG   L +      +    
Sbjct: 75  PLGEMYGISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDG-GHLPEPAAWYPVYQDA 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  M+R+ +      GIRVID       GQR+G+FA +G GKSTLL+   RS   D  ++
Sbjct: 134 PAPMSRKLITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVL 193

Query: 193 SLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFIE D   + L+K+V+VVATSD   + R  A   A +IAEYF  +G  
Sbjct: 194 ALIGERGREVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKR 253

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S K  G+ITA+ 
Sbjct: 254 VLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITALY 311

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  S + K 
Sbjct: 312 TVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKT 371

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               L  L+ ++EE   +  IG Y+ G D   D+A+ ++  I  +L Q   +LS    F 
Sbjct: 372 WAGDLRRLLAKYEEVELLLQIGEYQKGQDKEADQAIERIGAIRGWLCQGTHELSH---FN 428

Query: 432 EITKKLQ 438
           E    L+
Sbjct: 429 ETLNLLE 435


>gi|238023716|ref|YP_002907948.1| type III secretion system ATPase [Burkholderia glumae BGR1]
 gi|237878381|gb|ACR30713.1| Type III secretion system ATPase [Burkholderia glumae BGR1]
          Length = 450

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 164/431 (38%), Positives = 237/431 (54%), Gaps = 11/431 (2%)

Query: 4   NLETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
           + E L    E    +   V + G +  +      V+ L   V LG+    +  +   L  
Sbjct: 11  DFERLTDAIEREILAVPAVARTGKVMEVVGTVIKVSGLD--VTLGELCELRAPDGTLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E +S    V   GR   I       GRV++ LG+PIDG   
Sbjct: 69  AEVVGFTRDVALLSPFSRLENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    ++ + P  M R+ V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+
Sbjct: 129 LDSDDWR-PVIVQPPDPMKRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLM 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG + + +SVVV ATSD S + R  A  T
Sbjct: 188 GMFARGAACDINVIALIGERGREVREFIELILGPEGMARSVVVCATSDRSSMERAKAAHT 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + +   DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 308 GMGAT--GSITALYTVLAEDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAIDVLGSL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  S +  L+ +  E   +  +G Y+PG + + D+A+ +   I  FL
Sbjct: 366 SRVMSLVVPDAHARAASRIRELMAKHREVEVLLQVGEYQPGQNPLADEAIQKADAIRAFL 425

Query: 418 KQSPSDLSSED 428
            Q   D +  D
Sbjct: 426 CQRTRDYAPYD 436


>gi|225181608|ref|ZP_03735049.1| flagellar protein export ATPase FliI [Dethiobacter alkaliphilus AHT
           1]
 gi|225167716|gb|EEG76526.1| flagellar protein export ATPase FliI [Dethiobacter alkaliphilus AHT
           1]
          Length = 439

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 159/439 (36%), Positives = 240/439 (54%), Gaps = 10/439 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           + +L +  Q    + +  V+  G ++ +  +   V  L  +V     +    +      +
Sbjct: 3   KLDLSSYIQAVSSFPRAKVI--GRVTQVVGLTIEVRGLQAFVGEMCLIYVTPEAEPVTAE 60

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V+      V + P+G    I  G  V   GR F +       G V++ LG P+DG    G
Sbjct: 61  VVGFKNGHVLMMPLGDLRGIGPGCEVLPTGREFTVKAGPHLLGHVLDGLGVPLDGARING 120

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G +   + +  P  + RQR+++   TGIR ID+F     GQRIG+F+GSG+GKST+L M
Sbjct: 121 AGKV-CSVDNDPPNPLERQRIKEVLPTGIRAIDMFLTCGQGQRIGIFSGSGVGKSTMLGM 179

Query: 181 FARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            A+    D  +I+L+GERGREV +FI  D   + L +SVVV  TSD  P+LR    L A 
Sbjct: 180 IAKHSEADINVIALIGERGREVVDFIERDLGEEGLARSVVVAVTSDRPPLLRIKGALVAT 239

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAEYF  +G  V+L++DS+TR A + RE+    GE P  +GY  SVF+ LPR+LER G 
Sbjct: 240 AIAEYFRDQGKKVMLMMDSVTRLAMAQREVGLAIGEPPTTKGYTPSVFALLPRVLERAGT 299

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           S    G+IT + +VLVDGD+ N+P+AD+VR ILDGHIVL R LA +  +P +D   S+SR
Sbjct: 300 SRS--GSITGLYTVLVDGDDFNEPVADAVRGILDGHIVLTRDLAAKNHFPAIDVGKSISR 357

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L  +  S + +KL       +  + E  D+  IG Y  G +  +D+A   +  ++ FL+Q
Sbjct: 358 LMTELASEEHRKLAGQFRDYLSAYAEAEDLINIGAYVDGTNPRVDRARQYITAMHTFLRQ 417

Query: 420 SPSDLSSEDVFQEITKKLQ 438
             ++    D +++   KL+
Sbjct: 418 DVNEC---DPYEQALDKLK 433


>gi|116071304|ref|ZP_01468573.1| ATP synthase subunit A [Synechococcus sp. BL107]
 gi|116066709|gb|EAU72466.1| ATP synthase subunit A [Synechococcus sp. BL107]
          Length = 506

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYIS-SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V        +      V  L Q    G+ +  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGSVLQVGDGIARVYGL-QQAMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N+LG+PIDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGDAMLGRVVNSLGRPIDGKGDIAASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            ++D     +   VG++   V   +E          +V+V A + E   L+ +AP T  +
Sbjct: 186 NQADQDMICVYVAVGQKAASVANVVEVLRERGALGYTVIVAANASEPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQQQLSRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|323339970|ref|ZP_08080237.1| ATP synthase F1 sector alpha subunit [Lactobacillus ruminis ATCC
           25644]
 gi|323092612|gb|EFZ35217.1| ATP synthase F1 sector alpha subunit [Lactobacillus ruminis ATCC
           25644]
          Length = 503

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 170/419 (40%), Gaps = 14/419 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA    +  V + G ++ +         L   +  G+ +  +       G    +  + 
Sbjct: 15  QLANYKDELTVDEVGTVTYVGDGVARANGLDNALS-GELLQFEDG---TYGMAQNLEAND 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + I  GD V   GR   +       GRV+N LG+PIDG   + K D +  +
Sbjct: 71  VGIVVLGSFKGIREGDTVKRTGRIMEVPVGDALIGRVVNPLGQPIDGLGEI-KTDKTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  M+RQ V +  +TGI+ ID   P+  GQR  V      GK+++      +    
Sbjct: 130 EHKAPGVMDRQSVTEPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQ 189

Query: 189 --KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245
               I   +G++   VR  +E          ++VV A       L  +AP     + E F
Sbjct: 190 DMICIYVAIGQKESTVRTQVETLRKYGAMDYTIVVSAGPSSPAPLLWLAPYAGAAMGEEF 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
              G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E  
Sbjct: 250 MFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDELG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+   
Sbjct: 310 GGSMTALPFIETKAGDVSAYIPTNVISITDGQIFLDSDNFYSGVRPAIDAGTSVSRVGGD 369

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           A     KK+  +L   +  + E       G     +D      +++     + LKQ   
Sbjct: 370 AQIKAMKKVAGTLRLDLSSYRELESFAQFG---SDLDEATQAKLNRGRRTVEVLKQPLH 425


>gi|312215691|emb|CBX95643.1| similar to ATP synthase subunit alpha [Leptosphaeria maculans]
          Length = 549

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 99/431 (22%), Positives = 178/431 (41%), Gaps = 23/431 (5%)

Query: 6   ETLAQLAE-DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q       ++ + + G + S+      V  ++  V   + V      S   G  + 
Sbjct: 50  SILEQRIRGVQEESSLAETGRVLSVGDGIARVHGMN-NVQAEELVEFA---SGVKGMCMN 105

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +   G    +  G+ V   G    +       GRV++ LG PIDG   L   +
Sbjct: 106 LEAGQVGVVLFGSDRLVKEGETVKRTGAIVDVPVGEALLGRVVDGLGNPIDGKGPLKTTE 165

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
                  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK       +L
Sbjct: 166 -RRRAQLKAPGILPRQSVREPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAML 224

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
           +    +   D       I   +G++   V + ++    ++  + S+VV AT+ E+  L+ 
Sbjct: 225 NQNRWNKGTDEKKKLYCIYVAIGQKRSTVAQLVKTLEENDAMRYSIVVAATASEAAPLQY 284

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    ++ E+F   G + L+I D +T+ A + R+++      P    YP  VF    R
Sbjct: 285 LAPFVGTSMGEWFRDNGKHALVIYDDLTKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 344

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P 
Sbjct: 345 LLERSAKMNDKLGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPA 404

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + + + 
Sbjct: 405 INVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLSRG 461

Query: 411 PIIYDFLKQSP 421
             + + LKQ  
Sbjct: 462 ERLTELLKQKQ 472


>gi|34496125|ref|NP_900340.1| F0F1 ATP synthase subunit alpha [Chromobacterium violaceum ATCC
           12472]
 gi|81656848|sp|Q7P097|ATPA_CHRVO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|34101979|gb|AAQ58346.1| ATP synthase F1, alpha subunit [Chromobacterium violaceum ATCC
           12472]
          Length = 514

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKAKIQNLAEGAEVRTKGTVISVTDGIVRIHGLAD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHISEGDEVKCTGRILEVPVGPELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AQKSSPIEKIAPGVIARKSVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +   +    I   VG++   +   +           +++V AT+ E+  L+
Sbjct: 176 TAVALDAIINQKGNGVICIYVAVGQKASSIANVVRKLEEHGAMGHTIIVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF   G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYSGCAMGEYFRDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E+             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINEEEVEKLTGGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +    ++ + +KQ      S
Sbjct: 413 LDEATRKQLAHGEVVTELMKQKQFSTLS 440


>gi|332687030|ref|YP_004456804.1| ATP synthase subunit alpha [Melissococcus plutonius ATCC 35311]
 gi|332371039|dbj|BAK21995.1| ATP synthase alpha chain [Melissococcus plutonius ATCC 35311]
          Length = 517

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/430 (24%), Positives = 178/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y + L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKKQIENYQQELEVEEIGTVTYVGDGIARAYGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + + I  +G  + I  GD V   G+   +       GRV+N LG+PIDG   + K D
Sbjct: 66  LETNDIGIIVLGEFDTIREGDKVKRTGKIMEVPVGEAMIGRVVNPLGQPIDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 HTRPIEAMAPGVMQRKSVNEPLQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E     + L  ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVRSQVETLRKYNALDYTIVVTAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDDLGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAIDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRIDLASYRELE---SFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 422 QKLHAPLSVE 431


>gi|260677417|ref|YP_003208185.1| ATP synthase CF1 alpha subunit [Coix lacryma-jobi]
 gi|209361355|gb|ACI43270.1| ATP synthase CF1 alpha subunit [Coix lacryma-jobi]
          Length = 507

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  + + 
Sbjct: 13  LRKRIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T   +A
Sbjct: 188 KGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNS 307

Query: 303 --EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 LLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E +       +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELLKQS 424

Query: 421 PSDLSSED 428
            S+    +
Sbjct: 425 QSNPLPVE 432


>gi|237749344|ref|ZP_04579824.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
 gi|229380706|gb|EEO30797.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
          Length = 516

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   ++ L ++  +NL     +   G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MLLNPSEISDLIKNRIENLGDSAEIRNQGTVISVSDGICRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR    P      GRV+++LG PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGAYEHISEGDTVKCTGRILEVPTGPELIGRVVDSLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTSPIEKIAPGVIARQSVSQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   VG++   ++  +     +     ++VV AT+ ES  ++
Sbjct: 176 TAVAIDAIINQKGQDMICIYVAVGQKASSIKNTVRALEDNGAMDYTIVVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G + L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YIAPYAGCAMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHYVEEFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAINAGISVSRVGGAAQTKAIKSLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    + + +   + + LKQ+ 
Sbjct: 413 LDEATRRQLDRGARVTELLKQNQ 435


>gi|289742845|gb|ADD20170.1| F0F1-type ATP synthase alpha subunit [Glossina morsitans morsitans]
          Length = 552

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 101/422 (23%), Positives = 183/422 (43%), Gaps = 23/422 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +   +   GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGSEILGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDGQDETKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + EYF  KG
Sbjct: 244 IYVAIGQKRSTVAQIVKRLSDAGAMDYTIIVSATASDAAPLQYLAPYSGCAMGEYFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSS 426
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ     +S 
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMSI 480

Query: 427 ED 428
           ED
Sbjct: 481 ED 482


>gi|167750155|ref|ZP_02422282.1| hypothetical protein EUBSIR_01124 [Eubacterium siraeum DSM 15702]
 gi|167656898|gb|EDS01028.1| hypothetical protein EUBSIR_01124 [Eubacterium siraeum DSM 15702]
          Length = 501

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 176/422 (41%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +    +DY   + ++  G + ++      +  L +   + + +  +          + + 
Sbjct: 12  IKSRIKDYGSKIRLEDTGTVVTVGDGIVRIHGLEK-CMMNELLEFENG---VRCMALNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G   EI  GD V   G    +       GRV+NALG+PIDG  ++   + +
Sbjct: 68  QDFVGAVMLGSDAEIKEGDTVKRTGSVVSVPVGEELLGRVVNALGQPIDGKGAILAKE-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P  + R+ V    +TGI+ ID   P+  GQR  +      GK+ +      + 
Sbjct: 127 RPIEKIAPGIITRKSVNVPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 186

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V   +E          ++VV AT+ E   L+ +AP +  T+ 
Sbjct: 187 KKTDVICIYVAIGQKASTVANVVEQLTAAGAMDYTIVVSATASELAPLQYIAPYSGCTMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG + L+I D +++ A + R ++      P    YP  VF    RLLER     +
Sbjct: 247 EYFMEKGKDALIIYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYLHSRLLERAANLNE 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P  SVSR+
Sbjct: 307 NYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVRPAVNPGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L     +F E +       +   +D    + + +   I + LKQ 
Sbjct: 367 GGNAQIKAMKKVSGTLKLEYSQFRELQ---SFSQFGSDLDKDTKERLAKGERIVEILKQG 423

Query: 421 PS 422
            +
Sbjct: 424 QN 425


>gi|34539239|gb|AAQ74503.1| F1-ATPase alpha subunit [Calycanthus occidentalis]
          Length = 417

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 173/412 (41%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             SL   + ++ E   +     +   +D +    +++   + + LKQ   + 
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVLKQPQYEP 404


>gi|311033324|ref|ZP_07711414.1| F0F1 ATP synthase subunit alpha [Bacillus sp. m3-13]
          Length = 503

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + V   G +  +         L   V  G+ V         +G    
Sbjct: 10  ALIKKQIESYQSEIEVSDVGTVIQVGDGIARAHGL-DNVMAGELVEFSNG---VMGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   GR   +       GRV+NALG+P+DG   + +  
Sbjct: 66  LEENNVGIVILGPYTEIREGDAVRRTGRIMEVPVGEALIGRVVNALGQPVDGLGPI-ETS 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I ++ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEAQAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++     +  +AP T VT
Sbjct: 185 NQKDQDMVCIYVAIGQKESTVRGVVETLRKHGALDYTIVVTASASAPAPMLFLAPYTGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYDGKHVLVIYDDLTKQAAAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              KG  ++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SDAKGAGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVSGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNRGARTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QGLN 425


>gi|148240353|ref|YP_001225740.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. WH 7803]
 gi|158513319|sp|A5GNC8|ATPA_SYNPW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|147848892|emb|CAK24443.1| ATP synthase alpha chain [Synechococcus sp. WH 7803]
          Length = 506

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 180/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYIS-SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V        +      V  L Q V  G+ V  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGSVLQVGDGIARVYGL-QQVMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N LG  +DG   LG  +
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSTVRATGKIASVPVGDGLLGRVVNPLGVALDGKGDLGTTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 SRL-IESPAPGIIQRKSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   V +  E          +V+V A + +   L+ +AP T  +
Sbjct: 186 NQKDQDVVCVYVAIGQKAASVAQVTEVLRERGALDYTVIVAANASDPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG + L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQKQLGRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|254250974|ref|ZP_04944292.1| hypothetical protein BDAG_00140 [Burkholderia dolosa AUO158]
 gi|124893583|gb|EAY67463.1| hypothetical protein BDAG_00140 [Burkholderia dolosa AUO158]
          Length = 513

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 109/446 (24%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHISEGDIVKTTGRILEVPVGPELVGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDAIEKIAPGVIWRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ +S  ++
Sbjct: 176 TAVALDTIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGALEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTKVVKKLSGGIRTDLAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|291556551|emb|CBL33668.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium siraeum
           V10Sc8a]
          Length = 501

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 176/422 (41%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +    +DY   + ++  G + ++      +  L +   + + +  +          + + 
Sbjct: 12  IKSRIKDYGSKIRLEDTGTVVTVGDGIVRIHGLEK-CMMNELLEFENG---VRCMALNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G   EI  GD V   G    +       GRV+NALG+PIDG  ++   + +
Sbjct: 68  QDFVGAVMLGSDAEIKEGDTVKRTGSVVSVPVGEELLGRVVNALGQPIDGKGAILAKE-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P  + R+ V    +TGI+ ID   P+  GQR  +      GK+ +      + 
Sbjct: 127 RPIEKIAPGIITRKSVNVPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 186

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V   +E          ++VV AT+ E   L+ +AP +  T+ 
Sbjct: 187 KKTDVICIYVAIGQKASTVANVVEQLTAAGAMDYTIVVSATASELAPLQYIAPYSGCTMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG + L+I D +++ A + R ++      P    YP  VF    RLLER     +
Sbjct: 247 EYFMEKGKDALIIYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYLHSRLLERAANLNE 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P  SVSR+
Sbjct: 307 NYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVRPAVNPGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L     +F E +       +   +D    + + +   I + LKQ 
Sbjct: 367 GGNAQIKAMKKVSGTLKLEYSQFRELQ---SFSQFGSDLDKDTKERLAKGERIVEILKQG 423

Query: 421 PS 422
            +
Sbjct: 424 QN 425


>gi|312602777|ref|YP_004022622.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           rhizoxinica HKI 454]
 gi|306431580|emb|CBK52132.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           rhizoxinica HKI 454]
 gi|312170091|emb|CBW77103.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           rhizoxinica HKI 454]
          Length = 459

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 165/438 (37%), Positives = 242/438 (55%), Gaps = 11/438 (2%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           ++ +   L    E    S   + + G +  +      V  L   V LG+    +  +   
Sbjct: 19  LELDAHRLTDAIEKAILSTRAIARNGKVLEVIGTLVKVGGLD--VTLGELCELRAADGSL 76

Query: 59  L--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
           L   +VI    D+  + P    E IS    V   GR   +       GRVI++LG+PIDG
Sbjct: 77  LQHAEVIGFTRDVALLSPFSRLESISRSTRVIGLGRPLSVPVGEGLLGRVIDSLGQPIDG 136

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +    I +  P  M+R+ +E    TG+RV+D    L  GQR+G+FA +G+GKS
Sbjct: 137 FGPIDANE-ERPIFADSPDPMSRRMIEYPLATGVRVVDSMMTLAEGQRMGIFAPAGVGKS 195

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
           TLL MFAR    D  +I+L+GERGREVREF+E  LG + + +SVVV ATSD S I R  A
Sbjct: 196 TLLGMFARGAQCDVTVIALIGERGREVREFVELILGKEGMARSVVVCATSDRSSIERAKA 255

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLL
Sbjct: 256 AYVATAIAEYFRDRGQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLL 315

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G      G+ITA+ +VL + ++ +DPIA+ VR ILDGH++L+R +A   +YP +D L
Sbjct: 316 ERAGMGAT--GSITALYTVLAEDESGSDPIAEEVRGILDGHMILSREIAARNQYPAIDVL 373

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S+SR+  +    +     + +  L+ +  E   +  IG Y+PG + + D+A+ ++  I 
Sbjct: 374 GSLSRVMSQVMPREYVDAAARVRELLAKHREVEMLLQIGEYQPGGNPLADEAIAKIDAIR 433

Query: 415 DFLKQSPSDLSSEDVFQE 432
           DFL Q   + +  D  Q 
Sbjct: 434 DFLGQRTDEWADPDDTQS 451


>gi|299065195|emb|CBJ36361.1| ATP synthase, F1 sector, alpha subunit [Ralstonia solanacearum
           CMR15]
          Length = 513

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 102/446 (22%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L         G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKTRIEGLKAGADAKNTGTVISVTDGICRIHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS G+ V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGDYEHISEGNEVKCTGRILEVPVGPELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +         + ++VV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGIFCVYVAIGQKASTIANVVRKLEEHGALEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEHIEKITNGEIKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|34539437|gb|AAQ74602.1| F1-ATPase alpha subunit [Sowerbaea laxiflora]
          Length = 418

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|461562|sp|P35009|ATPA_GALSU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|629437|pir||S39520 H+-transporting two-sector ATPase (EC 3.6.3.14) alpha chain - red
           alga (Cyanidium caldarium) chloroplast
 gi|429178|emb|CAA48025.1| H(+)-transporting ATP synthase [Galdieria sulphuraria]
          Length = 505

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 181/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E Y   +     G +  +      V  L + V  G+ +  + K    +G  + + 
Sbjct: 13  IKEQIEKYETEVRFSAVGTVLQVGHGIARVYGLEE-VMAGELLEFEDK---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G    I  G  V   G+   I     + GRV+NALGK IDG       +  
Sbjct: 69  NDNVGVVLMGDDSNILEGSPVKSTGKIAEIPVGEEFLGRVVNALGKSIDGKVEPVCSENR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
           + I    P  + RQ V +  +TGI  ID   P+  GQR  +      GK+   L ++  +
Sbjct: 129 L-IEMLAPGIIVRQSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTSIALDTIINQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
            D     I + +G++   V + +           +++V A +DE   L+ +AP TA ++A
Sbjct: 188 KDQDVICIYAAIGQKASSVAQVVSTLEEKGALGYTIIVAANADEPASLQYIAPYTAASLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER     +
Sbjct: 248 EYFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNQ 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 KLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREMLKQS 424

Query: 421 PS 422
            +
Sbjct: 425 QN 426


>gi|114524|sp|P05439|ATPA_RHOBL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|45977|emb|CAA77313.1| ATPase alpha subunit [Rhodobacter blasticus]
          Length = 512

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 97/438 (22%), Positives = 178/438 (40%), Gaps = 25/438 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  +++ K+  V + G + S+      V  L   V  G+ V   G      G  + 
Sbjct: 10  AILKEQIKNFGKDAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG---IRGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           + +D V I   G   +I  GD V         P      GRV++ALG PIDG   +   +
Sbjct: 66  LEVDNVGIVIFGDDRDIKEGDTVKRTKSIVDVPAGNGLLGRVVDALGNPIDGKGPIVASE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 126 RRIA-DVKAPGIIPRKGVHEPMATGLKAVDAMIPIGRGQRELIIGDRQTGKTAVALDTIL 184

Query: 184 SDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230
           +                  +   +G++   V + ++          +VVV AT+ +   +
Sbjct: 185 NQKVYNDAAGDDESKKLYCVYVAIGQKRSTVAQLVKKLEETGAMAYTVVVAATASDPAPM 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   I E+F   G + L+I D +++ A + R+++      P    YP  VF   
Sbjct: 245 QFLAPFSGTAIGEFFRDNGRHALMIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 304

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +G  
Sbjct: 305 SRLLERSAKMNGDFGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLESELFYQGIR 364

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P V+   SVSR+   A ++  K +   +   + ++ E   +     +   +D      ++
Sbjct: 365 PAVNTGLSVSRVGSSAQTSAMKSVAGKVKLELAQYRE---MAAFAQFGSDLDASTQALLN 421

Query: 409 QVPIIYDFLKQSPSDLSS 426
           +   + + +KQ      +
Sbjct: 422 RGARLTELMKQPQYSPLT 439


>gi|295098946|emb|CBK88035.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium cylindroides
           T2-87]
          Length = 511

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 186/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   ++QL +   +N+     + + G + SI     TV  L +   + + ++     
Sbjct: 1   MSLNPAQISQLIKAQIQNIDQDLEMNESGTVLSIGDGIATVYGL-RNAMMSELLLFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  + V +  +G   +I  GDLV   G    +       GRV+NALG+PID
Sbjct: 57  HDVYGMVMNLEDEQVGVVLMGENNDIKEGDLVKRTGHIVEVPVGDAMVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G+  +     +  +    P  M R+ V    +TG+++ID   P+  GQR  +      GK
Sbjct: 117 GNGEIHTTK-TRPVERVAPGVMTRKSVSVPLQTGLKIIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + + +    +      K I   +G++   V + +E +        + +VV+T+ E   L+
Sbjct: 176 TAIATDTIINQKGQNVKCIYVAIGQKASTVAQIVEKFKQYGAMEYTTIVVSTASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +   G++VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGCAIGEEWMENGEDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++ GN   TA+  +     + +  I  +V SI DG I L   +  EG  P
Sbjct: 296 RLLERAARLNEDYGNGSLTALPIIETQAGDISAYIPTNVISITDGQIFLKTDMFNEGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K++  SL   + ++ E         +   +D    + ++ 
Sbjct: 356 SVDSGFSVSRVGSAAQIKAMKQVSGSLKLELAQYREME---SFAKFGSDLDAATMEVLNH 412

Query: 410 VPIIYDFLKQSP 421
              +   L Q  
Sbjct: 413 GARLTQLLIQKQ 424


>gi|218194450|gb|EEC76877.1| hypothetical protein OsI_15081 [Oryza sativa Indica Group]
          Length = 1981

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 106/445 (23%), Positives = 190/445 (42%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVTDGIVRVHGLSD-VMQGEMLEFPATQ 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPSYGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELVGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPLQTGIKSIDAMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +   ++ A+       I   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIIAQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMAYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E         + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKIIKGLSGGIRTDLAQYREL---AAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQAQ 440



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G +V + G    +       GR+++ LG PID      +G 
Sbjct: 640 LGDGVVRTIALGSSDGLRRGLMVSNTGNPITVPVGKATLGRIMDVLGSPIDERGP-PRGK 698

Query: 124 LSMEIMSKVPPAMN 137
               I   V  A  
Sbjct: 699 PMNTIHVDVVSAEE 712


>gi|114765225|ref|ZP_01444357.1| flagellum-specific ATP synthase [Pelagibaca bermudensis HTCC2601]
 gi|114542360|gb|EAU45388.1| flagellum-specific ATP synthase [Roseovarius sp. HTCC2601]
          Length = 418

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 175/408 (42%), Positives = 255/408 (62%), Gaps = 3/408 (0%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
             TV+ L + V +G   V QG N   L +V+ I+     + P G  + +  GD V     
Sbjct: 1   MLTVSGLERAVGIGAHCVVQGANGPVLAEVVGIDESGTRLLPFGSWDGVRTGDPVAVTQS 60

Query: 93  -FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
              + P   W GRV+NALG+P+DG   L +GD    + +  PPA  R+RV     T ++V
Sbjct: 61  GAELRPDDAWIGRVVNALGQPLDGKGRLPEGDRPRPLRAAPPPAFTRRRVGDRLSTRLKV 120

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED-YL 210
           +D+F PLC GQR+GVF+GSG+GKST+++M AR+   D +++ LVGERGREV++F++D   
Sbjct: 121 MDVFAPLCRGQRMGVFSGSGVGKSTMMAMLARNAQADVIVVGLVGERGREVQDFLQDDLG 180

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            + L ++VVVV+T DE P++R+ A  TA T+AE+F  +G  VLL+LDS+TRFA + REI 
Sbjct: 181 EEGLARAVVVVSTGDEPPLMRRQAAWTATTVAEHFRDQGKQVLLLLDSVTRFAMAQREIG 240

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              GE P A+GYP + F+ELPR++ER GP   E G+ITA+ +VLVDGD+ +DPIAD+VR 
Sbjct: 241 LAGGEPPTAKGYPPTTFAELPRMMERAGPGSGEGGDITALYTVLVDGDDMDDPIADAVRG 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I+DGHIVL+R +AE GR+P V+ L S+SR+       +E  +  +    + R+ +  ++ 
Sbjct: 301 IMDGHIVLDRRIAETGRFPAVNLLRSISRMLPDCHGPEEYAIYRAARCAMARYADMEELI 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437
            IG YRPG D  +D A+     + D L+QS  D +   + F  I   L
Sbjct: 361 RIGAYRPGSDAEVDAAIKLFQPLEDLLRQSKRDAMEPNETFARIHACL 408


>gi|55976894|gb|AAV68296.1| F1-ATPase alpha subunit [Sapria ram]
          Length = 419

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVDGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVLFGSETAIQE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKATSESETLSCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|327441430|dbj|BAK17795.1| F0F1-type ATP synthase, alpha subunit [Solibacillus silvestris
           StLB046]
          Length = 502

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G + ++         L      G+ +         +G    
Sbjct: 10  SLIKQQIEGYQSELKVSEVGTVITVGDGIARAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G    I  GD V   GR   +       GRV+N LG P+DG   +    
Sbjct: 66  LEEGNVGIVILGDYLGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGMPVDGLGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S     M R+ V +  +TGI+ ID   P+  GQR  +     +GK+++      
Sbjct: 126 -SRPIESPAFGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQVGKTSVAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   VR  +E +        ++VV A++ +   L  +AP   V+
Sbjct: 185 NQQGEDMICIYVAIGQKESTVRNVVETFRKHGALDYTIVVTASASQPAPLLYLAPFAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMLDGKHVLIVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NETYKNGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFNSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D I    + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLAAFRELESFAQFG---SDLDAITLAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDLN 425


>gi|226291035|gb|EEH46463.1| ATPase alpha subunit [Paracoccidioides brasiliensis Pb18]
          Length = 556

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 177/418 (42%), Gaps = 22/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V     +S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEF---SSGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIKTTEKRRA-QLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    +D  D      
Sbjct: 187 SVNQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNDTGDETKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S++V AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIIVAATASEAAPLQYIAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 307 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKHKGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQL 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ     
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYQP 481


>gi|291288213|ref|YP_003505029.1| flagellar protein export ATPase FliI [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885373|gb|ADD69073.1| flagellar protein export ATPase FliI [Denitrovibrio acetiphilus DSM
           12809]
          Length = 435

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 167/435 (38%), Positives = 246/435 (56%), Gaps = 10/435 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIR 64
           + LA+L     K  +   G ++ I     T+      + +G     +       L +++ 
Sbjct: 2   KNLARLKRVDHKASLQIKGKVTKIVG--LTIEADGPLLGIGTRCSIESMDGRRILAEIVG 59

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              D + + P G  E I+ G  V +      +  S    GRV++ LG P+DG   +   +
Sbjct: 60  FKDDRIILMPYGESEGIAPGSHVTNESYGNTVKVSDSLLGRVLDGLGNPMDGKGPITDFE 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L + +    P A+ R+ ++    TGI+ ID    +  GQR+G+FAGSG+GKS  L M AR
Sbjct: 120 L-VNVYQSPPQALEREIIKTPVSTGIKAIDNLITIGRGQRVGIFAGSGVGKSVTLGMIAR 178

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D  +I+L+GERGREVREFI  D   + LK+SV+V+ATSD+S ++RK+       IA
Sbjct: 179 DSDADVNVIALIGERGREVREFIERDLGEEGLKRSVLVIATSDQSALIRKLGAFVGTAIA 238

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF SKG NV+L++DS+TRFA + REI    GE P  +GY  SVF  LP+LLER G ++K
Sbjct: 239 EYFRSKGLNVMLMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFGLLPKLLERAG-TQK 297

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KGNIT + +VLV+ D+ NDPI DSVRSI+DGHIVL+R LA +  YP +D L+S SRL  
Sbjct: 298 GKGNITGLYTVLVEADDMNDPIGDSVRSIIDGHIVLSRGLAAKNHYPAIDVLSSASRLMK 357

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +  +  +      +  L+  + E  D+  IG Y  G +  +D+++ ++  I  FL+Q   
Sbjct: 358 EIVNDKQYANAGRMRDLLASYNEAEDLINIGAYVKGSNPKIDESIAKIGQIEQFLRQGID 417

Query: 423 DLSSEDVFQEITKKL 437
           D  +   F+E TK L
Sbjct: 418 DSIN---FEESTKLL 429


>gi|34539297|gb|AAQ74532.1| F1-ATPase alpha subunit [Eustrephus latifolius]
          Length = 418

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERASKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|189499277|ref|YP_001958747.1| F0F1 ATP synthase subunit alpha [Chlorobium phaeobacteroides BS1]
 gi|226739857|sp|B3EL39|ATPA_CHLPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189494718|gb|ACE03266.1| ATP synthase F1, alpha subunit [Chlorobium phaeobacteroides BS1]
          Length = 526

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 96/445 (21%), Positives = 176/445 (39%), Gaps = 38/445 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K+L      A+ Y        G +  +      +  LS+ V  G+ +       + +G
Sbjct: 14  LRKHLAGFESEADVYD------VGTVLQVGDGIARIYGLSK-VAAGELLEFP---DNVMG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V     G    +  GD V   G    I       GRVIN LG+PIDG   +
Sbjct: 64  MALNLEEDNVGAVMFGKSTAVKEGDTVKRTGILASIPVGEAMLGRVINPLGEPIDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +  + + +  K P  + R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 124 -ETSIRLPLERKAPGVIFRKSVNQPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAVAI 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G++G  + + +           + V+ +++ +   ++ +AP 
Sbjct: 183 DTIINQKGKDVFCIYVAIGQKGSTIAQVVSTLEKYGAMEYTTVIASSASDPAPMQFIAPY 242

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               I E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 243 AGAAIGEFFRDTGRHALVIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 302

Query: 297 IGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
                 +                     G++TA+  +     + +  I  +V SI DG I
Sbjct: 303 AAKITDDLETAKKMNDLPEPLKPMVKAGGSLTALPVIETQAGDVSAYIPTNVISITDGQI 362

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G+ P ++   SVSR+   A     KK+  +L   + +F E         + 
Sbjct: 363 FLEPNLFNAGQRPAINVGISVSRVGGSAQIKAMKKITGTLRLDLAQFRELE---AFSKFG 419

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D      + +   + + LKQ  
Sbjct: 420 SDLDKATKAQLDRGARLVEILKQDQ 444


>gi|89070094|ref|ZP_01157424.1| ATP synthase subunit A [Oceanicola granulosus HTCC2516]
 gi|89044315|gb|EAR50458.1| ATP synthase subunit A [Oceanicola granulosus HTCC2516]
          Length = 512

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 182/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   +  G+ V   G  
Sbjct: 1   MAIQAAEISAILKDQIKNFGQGAEVAEVGRVLSVGDGIARVYGL-DNIQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLETDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGEGLLGRVLDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGEVQFSERRVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +      +                  I   VG++   V + ++       +  S+VV 
Sbjct: 176 TAVAMDTILNQKSYNDAAGDDESKKLYCIYVAVGQKRSTVAQLVKRLEESGAIDYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPMQFLAPYAACAMAEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     +E G  ++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLNEEHGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGVRPAVNTGLSVSRVGSAAQTNAMKSVAGPVKLELAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DAATQQLLNRGARLTELMKQPQYSPLT 439


>gi|322708625|gb|EFZ00202.1| ATP synthase alpha chain [Metarhizium anisopliae ARSEF 23]
          Length = 552

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 102/415 (24%), Positives = 176/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  L+  V   + V      S   G  + +    V +   G    
Sbjct: 68  AETGRVLSVGDGIARVHGLA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 123

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRVI+ALG PIDG   L   +       K P  + R+
Sbjct: 124 VKEGETVKRTGAIVDVPVGTELLGRVIDALGNPIDGKGPLNTKE-RRRAQLKAPGILPRK 182

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG + +D   P+  GQR  +      GK      T+L+    ++  D      
Sbjct: 183 SVNEPVQTGFKSVDAMVPIGRGQRELIIGDRQTGKTAVGLDTILNQKRWNNGSDEKKKLY 242

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T  ++AE+F   
Sbjct: 243 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGASVAEHFRDN 302

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER          G+
Sbjct: 303 GRHALVIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDHHGGGS 362

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 363 MTALPIIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSSAQL 422

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 423 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLARGERLTELLKQKQ 474


>gi|147679149|ref|YP_001213364.1| F0F1 ATP synthase subunit alpha [Pelotomaculum thermopropionicum
           SI]
 gi|189081306|sp|A5CYE4|ATPA_PELTS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146275246|dbj|BAF60995.1| F0F1-type ATP synthase, alpha subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 506

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 97/440 (22%), Positives = 175/440 (39%), Gaps = 20/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ +          Q      G +  +      V  L   + + + +   G  
Sbjct: 1   MNLRPEEISSIIRQQIDKYQAQIELTDVGTVIQVGDGIARVYGLMDCMSM-ELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              LG  + +  D +    +G  + I  GD V   GR   +       GRV+N LG+P+D
Sbjct: 59  --VLGMALNLEEDNIGCVILGPYKHIKEGDTVKRTGRIVSVPVGDALIGRVVNPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V +  +TGI+ +D   P+  GQR  +      GK
Sbjct: 117 GKGPVN-SDKYRPVEVIAPGVIYRKPVHQALQTGIKAVDSMIPIGRGQRELILGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   VG++   V   ++          ++VV AT+ +   L 
Sbjct: 176 TAIAVDAIINQRGGDVICIYVAVGQKQSTVANVVQKLTETGAMDYTIVVSATASDPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F  +G +VL++ D +++ A + RE++      P    YP  VF+   
Sbjct: 236 FIAPFAGAAMGEEFMWQGRHVLIVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFNLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER    + +   G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKLDDQFGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIYLEPDLFYAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGISVSRVGGAAQVRAMRQVAGRLRLDLAQYRE---LAAFAQFGADLDKATQARLIR 412

Query: 410 VPIIYDFLKQSPS-DLSSED 428
              + + LKQ     +  ED
Sbjct: 413 GDRMTELLKQGQYVPMPVED 432


>gi|296222590|ref|XP_002757265.1| PREDICTED: ATP synthase subunit alpha, mitochondrial [Callithrix
           jacchus]
          Length = 553

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + +  
Sbjct: 126 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPQIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P   GQ   +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKTVDSLVPTGRGQHELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G+    V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQNRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 424

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 425 AMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 475


>gi|6561635|gb|AAF16979.1|AF197647_1 ATPase alpha subunit [Tetracentron sinense]
          Length = 421

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 406


>gi|27461589|gb|AAM95211.1| ATPase F1 alpha subunit [Luzula acuminata]
          Length = 411

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 174/413 (42%), Gaps = 22/413 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG
Sbjct: 57  TGPIVDVPAGRAMLGRVVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGER 198
           ++ +D   P+  GQR  +      GK+ +          ++   + +     +   +G++
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N    SV+V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           L   + ++ E   +     +   +D      +++   + + LKQ   +    D
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEPLPID 405


>gi|225561966|gb|EEH10246.1| ATP synthase alpha subunit [Ajellomyces capsulatus G186AR]
          Length = 554

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/415 (23%), Positives = 174/415 (41%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 71  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 126

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRVI+ALG PIDG   + K         K P  + R+
Sbjct: 127 VKEGETVKRTGEIVDVPVGPELLGRVIDALGNPIDGKGPI-KAKEKRRAQLKAPGILPRR 185

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    +D  D      
Sbjct: 186 SVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNDTNDESKKLY 245

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 246 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGCAVGEWFRDN 305

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+  D +++ A + R+++      P    YP  VF    RLLER          G+
Sbjct: 306 GRHALITYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDNHKGGS 365

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 366 LTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQL 425

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 426 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQ 477


>gi|17548036|ref|NP_521438.1| F0F1 ATP synthase subunit alpha [Ralstonia solanacearum GMI1000]
 gi|81592094|sp|Q8XU74|ATPA_RALSO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|17430342|emb|CAD17107.1| probable atp synthase alpha chain protein [Ralstonia solanacearum
           GMI1000]
          Length = 513

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 102/446 (22%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L         G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKTRIEGLKAGADAKNTGTVISVTDGICRIHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS G+ V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGDYEHISEGNEVKCTGRILEVPVGPELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDV-IEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +         + ++VV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGIFCVYVAIGQKASTIANVVRKLEEHGALEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEHIEKITNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDEATRKQLERGRRVTELLKQPQYQP 438


>gi|50058579|gb|AAT69042.1| F1-ATPase alpha subunit [Iseia luxurians]
          Length = 429

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVXRXGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|16082728|ref|NP_395174.1| type III secretion system ATPase [Yersinia pestis CO92]
 gi|28373029|ref|NP_783675.1| type III secretion system ATPase [Yersinia enterocolitica]
 gi|31795281|ref|NP_857742.1| type III secretion system ATPase [Yersinia pestis KIM]
 gi|31795483|ref|NP_857937.1| type III secretion system ATPase [Yersinia pestis KIM]
 gi|32470288|ref|NP_863523.1| type III secretion system ATPase [Yersinia enterocolitica]
 gi|45478544|ref|NP_995371.1| type III secretion system ATPase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51593909|ref|YP_068476.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP
           32953]
 gi|108793664|ref|YP_636814.1| type III secretion system ATPase [Yersinia pestis Antiqua]
 gi|122815812|ref|YP_001004078.1| type III secretion system ATPase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|149192699|ref|YP_001293931.1| type III secretion system ATPase [Yersinia pestis CA88-4125]
 gi|162417750|ref|YP_001604472.1| type III secretion system ATPase [Yersinia pestis Angola]
 gi|165927829|ref|ZP_02223661.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165940068|ref|ZP_02228602.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011707|ref|ZP_02232605.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166214459|ref|ZP_02240494.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401924|ref|ZP_02307410.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422384|ref|ZP_02314137.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167422395|ref|ZP_02314148.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167422904|ref|ZP_02314657.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426875|ref|ZP_02318628.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|186897574|ref|YP_001874685.1| type III secretion system ATPase [Yersinia pseudotuberculosis
           PB1/+]
 gi|229896856|ref|ZP_04512016.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis Pestoides A]
 gi|229900211|ref|ZP_04515347.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|55977793|sp|P40291|YSCN_YERPS RecName: Full=Probable ATP synthase YscN; AltName: Full=Yop
           proteins secretion ATPase
 gi|14579346|gb|AAK69223.1|AF336309_18 YscN [Yersinia enterocolitica]
 gi|2996241|gb|AAC62564.1| Yops secretion ATPase YscN homolog [Yersinia pestis KIM 10]
 gi|3822071|gb|AAC69791.1| Yops secretion protein [Yersinia pestis KIM 10]
 gi|5832460|emb|CAB54917.1| putative Yops secretion ATP synthase [Yersinia pestis CO92]
 gi|23630601|gb|AAN37557.1| YscN [Yersinia enterocolitica]
 gi|45357166|gb|AAS58562.1| putative Yops secretion ATP synthase YscN [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51591606|emb|CAF25410.1| putative Yops secretion ATP synthase [Yersinia pseudotuberculosis
           IP 32953]
 gi|108782211|gb|ABG16266.1| type III secretion system ATPase, FliI/YscN [Yersinia pestis
           Antiqua]
 gi|121663686|emb|CAL10048.1| probable type III secretion system ATP synthase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|148872357|gb|ABR14847.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis CA88-4125]
 gi|162354770|gb|ABX88717.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis Angola]
 gi|165911978|gb|EDR30621.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920265|gb|EDR37566.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165989314|gb|EDR41615.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204352|gb|EDR48832.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958194|gb|EDR55215.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|166958621|gb|EDR55642.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|166958632|gb|EDR55653.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048652|gb|EDR60060.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054174|gb|EDR64001.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|186700600|gb|ACC91228.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pseudotuberculosis PB1/+]
 gi|229686731|gb|EEO78811.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229700127|gb|EEO88166.1| ATPase for protein unfolding and Type III secretion [Yersinia
           pestis Pestoides A]
 gi|310923231|emb|CBW54697.1| YscN, T3SS ATPase, PMID 17050689 [Yersinia enterocolitica (type
           O:8)]
          Length = 439

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 161/427 (37%), Positives = 233/427 (54%), Gaps = 12/427 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYIC 73
              L+   G ++ +T        +   V +G+    +  ++      +VI        + 
Sbjct: 17  GSRLIQIRGRVTQVTGTLLK--AVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLI 74

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    IS    V   G   ++       G+V++ LG+P DG   L +      +    
Sbjct: 75  PLGEMYGISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDG-GHLPEPAAWYPVYQDA 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  M+R+ +      GIRVID       GQR+G+FA +G GKSTLL+   RS   D  ++
Sbjct: 134 PAPMSRKLITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVL 193

Query: 193 SLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFIE D   + L+K+V+VVATSD   + R  A   A +IAEYF  +G  
Sbjct: 194 ALIGERGREVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKR 253

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S K  G+ITA+ 
Sbjct: 254 VLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITALY 311

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  S + K 
Sbjct: 312 TVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKT 371

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               L  L+ ++EE   +  IG Y+ G D   D+A+ ++  I  +L Q   +LS    F 
Sbjct: 372 WAGDLRRLLAKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELSH---FN 428

Query: 432 EITKKLQ 438
           E    L+
Sbjct: 429 ETLNLLE 435


>gi|145597142|ref|YP_001154606.1| type III secretion system ATPase [Yersinia pestis Pestoides F]
 gi|145212910|gb|ABP42316.1| type III secretion system ATPase, FliI/YscN [Yersinia pestis
           Pestoides F]
          Length = 439

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 161/427 (37%), Positives = 233/427 (54%), Gaps = 12/427 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYIC 73
              L+   G ++ +T        +   V +G+    +  ++      +VI        + 
Sbjct: 17  GSRLIQIRGRVTQVTGTLLK--AVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLI 74

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    IS    V   G   ++       G+V++ LG+P DG   L +      +    
Sbjct: 75  PLGEMYGISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDG-GHLPEPAAWYPVYQDA 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  M+R+ +      GIRVID       GQR+G+FA +G GKSTLL+   RS   D  ++
Sbjct: 134 PAPMSRKLITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVL 193

Query: 193 SLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFIE D   + L+K+V+VVATSD   + R  A   A +IAEYF  +G  
Sbjct: 194 ALIGERGREVREFIESDLGEEGLRKAVLVVATSDRPSLERAKAGFVATSIAEYFRDQGKR 253

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S K  G+ITA+ 
Sbjct: 254 VLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITALY 311

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  S + K 
Sbjct: 312 TVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKT 371

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               L  L+ ++EE   +  IG Y+ G D   D+A+ ++  I  +L Q   +LS    F 
Sbjct: 372 WAGDLRRLLAKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELSH---FN 428

Query: 432 EITKKLQ 438
           E    L+
Sbjct: 429 ETLNLLE 435


>gi|20146763|gb|AAM12499.1|AC074232_26 ATPase alpha subunit [Oryza sativa Japonica Group]
 gi|31433181|gb|AAP54723.1| ATP synthase alpha chain, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 503

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|253315773|ref|ZP_04838986.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
          Length = 502

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G    I+ GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINITK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTASKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|125807728|ref|XP_001360504.1| GA17558 [Drosophila pseudoobscura pseudoobscura]
 gi|195150193|ref|XP_002016039.1| GL11379 [Drosophila persimilis]
 gi|54635676|gb|EAL25079.1| GA17558 [Drosophila pseudoobscura pseudoobscura]
 gi|194109886|gb|EDW31929.1| GL11379 [Drosophila persimilis]
          Length = 552

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  V   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGLN-NVQADEMVEF---SSGLKGMSLNLEADNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 125 KQGDIVKRTGAIVDVPVGYELLGRVVDALGNAIDGLGAIDTKD-RFRVGIKAPGIIPRVS 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V +  +TGI+ +D   P+  GQR  +      GK+ L      +                
Sbjct: 184 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAQEESKKLYC 243

Query: 191 IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++        K +++V AT+ ++  L+ +AP +   + E+F  KG
Sbjct: 244 IYVAIGQKRSTVAQMLKRLTDAGAMKYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDKG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 304 KHALIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 363

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 364 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 424 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQ 474


>gi|20799694|gb|AAM28610.1|AF503357_1 ATPase alpha subunit [Prosopanche americana]
          Length = 412

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/410 (24%), Positives = 172/410 (41%), Gaps = 21/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINERGTSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     KK+  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKKVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           SL   + ++ E   +     +   +D      +H+   + + LKQ   + 
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLHRGARLTEVLKQPQYEP 402


>gi|218135372|ref|ZP_03464176.1| hypothetical protein BACPEC_03277 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990757|gb|EEC56768.1| hypothetical protein BACPEC_03277 [Bacteroides pectinophilus ATCC
           43243]
          Length = 501

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 179/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ + ++  K       V   G +  +      +  L      G+ +   G  
Sbjct: 1   MKLRPEEISSVIKEQIKRYSTELEVSDVGTVIQVADGIARIHGL-DNAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G  + I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -EVYGMVMNLEEDNVGAVLLGGADSINEGDTVKTTGRVVEVPVGDAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D   +I       + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETDKYRQIERVASGVITRKSVDTPLQTGIKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +     V  I   +G++   V   ++          + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQDVLCIYVAIGQKASTVANIVKTLEDYGAMAYTTVVASTASEMAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMEQGKDVLVVYDDLSKHATAYRTLSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAARMSDEYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+ + +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AVNAGLSVSRVGGSAQIKAMKKIAAPIRVDLAQYRE---LASFAQFGSELDADTSEKLAQ 412

Query: 410 VPIIYDFLKQSP 421
              I + LKQ  
Sbjct: 413 GARIKEMLKQPQ 424


>gi|126175125|ref|YP_001051274.1| flagellum-specific ATP synthase [Shewanella baltica OS155]
 gi|160876174|ref|YP_001555490.1| flagellum-specific ATP synthase [Shewanella baltica OS195]
 gi|217972619|ref|YP_002357370.1| flagellum-specific ATP synthase [Shewanella baltica OS223]
 gi|304409957|ref|ZP_07391576.1| flagellar protein export ATPase FliI [Shewanella baltica OS183]
 gi|307302330|ref|ZP_07582088.1| flagellar protein export ATPase FliI [Shewanella baltica BA175]
 gi|125998330|gb|ABN62405.1| flagellar protein export ATPase FliI [Shewanella baltica OS155]
 gi|160861696|gb|ABX50230.1| flagellar protein export ATPase FliI [Shewanella baltica OS195]
 gi|217497754|gb|ACK45947.1| ATPase FliI/YscN [Shewanella baltica OS223]
 gi|304351366|gb|EFM15765.1| flagellar protein export ATPase FliI [Shewanella baltica OS183]
 gi|306914368|gb|EFN44789.1| flagellar protein export ATPase FliI [Shewanella baltica BA175]
 gi|315268370|gb|ADT95223.1| flagellar protein export ATPase FliI [Shewanella baltica OS678]
          Length = 445

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 159/443 (35%), Positives = 241/443 (54%), Gaps = 9/443 (2%)

Query: 1   MQKN----LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           MQ      L  L    +       V  G +  +  +    +       +G     +    
Sbjct: 1   MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASG--CRAPVGSLCSIETMAG 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
           + + +V+  + +++Y+ P+     +  G  V   G    ++      GRV++  G P+DG
Sbjct: 59  ELIAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L + D      S     ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 119 LGAL-QTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFIE+ LGD    +SVVV A +D SP++R  A
Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+
Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  
Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIE 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P + 
Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL+Q+  D  S    Q +  +L
Sbjct: 418 AFLRQTMRDAFSFTDSQVMLGQL 440


>gi|332637152|ref|ZP_08416015.1| F0F1 ATP synthase subunit alpha [Weissella cibaria KACC 11862]
          Length = 503

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 177/426 (41%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +QLA    +  V + G ++ +      VT L +    G+ V  +       G    +  +
Sbjct: 14  SQLANYQDELTVQETGTVTYVGDGIARVTGL-ENALAGELVEFENG---VFGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G  +EI  GD V   GR   +       GRV+NALG+PIDG   +     +  
Sbjct: 70  DVGIIILGKYDEIREGDTVKRTGRIMEVPVGEGLIGRVVNALGQPIDGMGPINSTS-TRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSD 185
           +  K P  M R+ V +  +TG++ +D   P+  GQR  +      GK+   + ++  + D
Sbjct: 129 VEVKAPGVMERKSVFEPLQTGLKAVDALVPIGRGQRELIIGDRKTGKTSVAIDTILNQKD 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
               VI   +G++   VR  +E          ++VV A   E   +  +AP     + E 
Sbjct: 189 QDMIVIYVAIGQKDSTVRTQVETLRQMGALDYTIVVSAGPSEPAPMLYLAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E 
Sbjct: 249 FMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDEL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+  
Sbjct: 309 GGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLDADQFYAGVRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   +  F+E       G     +D      + +     + LKQ   
Sbjct: 369 DAQIKAMKKVAGTLRLDLASFKELESFAQFG---SDLDAATQAKLARGRRTVELLKQPLH 425

Query: 423 DLSSED 428
                +
Sbjct: 426 QPLPVE 431


>gi|89068700|ref|ZP_01156086.1| flagellum-specific ATP synthase [Oceanicola granulosus HTCC2516]
 gi|89045663|gb|EAR51725.1| flagellum-specific ATP synthase [Oceanicola granulosus HTCC2516]
          Length = 438

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 175/418 (41%), Positives = 258/418 (61%), Gaps = 5/418 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +SS+  +  T T L + + +G      G     LG+V+ ++    +I P G  + I  
Sbjct: 8   GRVSSVRGLLLTATGLERAIGIGQRCRVLGAGGAVLGEVVGVDGAGSHILPFGTWDGIVA 67

Query: 84  GDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           GD V     G  R+ P   W GRV++ LG+P+D    L +G     + +  PPA +R+RV
Sbjct: 68  GDQVEVSPQGE-RVRPCDGWIGRVVDPLGRPLDRAGPLPEGRSPRAVRAGPPPAFDRRRV 126

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
               +TGIR  D FTPLC GQR+GVFAGSG+GKSTL++M AR+   D +++ L+GERGRE
Sbjct: 127 GARLETGIRAFDAFTPLCRGQRMGVFAGSGVGKSTLMAMLARNADVDVIVVGLIGERGRE 186

Query: 202 VREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V++FI+ D   + L ++V+VVAT DE P++R+ A  TA+ +AE+F  +G  VLL+LDSIT
Sbjct: 187 VQDFIQADLGPEGLARAVLVVATGDEPPLMRRQAAWTAMAVAEHFRDRGKQVLLLLDSIT 246

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI  + GE P +RGYP +VF+ELPRLLER GP    +G+ITA+ +VLV+G + 
Sbjct: 247 RFATAQREIGLSGGEPPTSRGYPPTVFAELPRLLERAGPGCDGQGDITALFTVLVEGSDM 306

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            +P+ADSVR I DGH++L+R +AE GRYP +D   SVSR+       DE  ++S+    +
Sbjct: 307 EEPVADSVRGITDGHVILDRRIAERGRYPAIDLQRSVSRMLPDCHGPDEFAILSAARRAL 366

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEITKKL 437
            R+ +  ++  IG YRPG D   D A+     +  +L Q   + +   + F ++ + L
Sbjct: 367 GRYGDMEELVRIGAYRPGSDPETDAAIRFADPVAAYLGQRKGEATPPRETFADLYRLL 424


>gi|116618947|ref|YP_819318.1| F0F1 ATP synthase subunit alpha [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431392|ref|ZP_03913443.1| F0F1 ATP synthase subunit alpha [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122270853|sp|Q03V27|ATPA_LEUMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116097794|gb|ABJ62945.1| ATP synthase F1 subcomplex alpha subunit [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|227352855|gb|EEJ43030.1| F0F1 ATP synthase subunit alpha [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 505

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +   L V + G ++ +       T L+  +  G+ V          G    
Sbjct: 10  ALIKQQLEKFDTTLTVEEVGTVTYVGDGVARATGLANALA-GELVEFANG---TYGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  ++I  GD V   GR   +       GRV+NALG+PIDG   + K D
Sbjct: 66  LESSEVGIIILGGFDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPVEVKAPGVMERKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D    VI   +G++   VR  +E          ++VV A   E   +  +AP     
Sbjct: 185 NQKDQNMIVIYVAIGQKNSTVRAQVETLRQMGAMDYTIVVNAGPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG + L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPFIETQAGDVSAYIPTNVISITDGQVFLDADQFYAGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLASFRELESFAQFG---SDLDSATQAKLARGRRTVEILK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QPLN 425


>gi|78184065|ref|YP_376500.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. CC9902]
 gi|124007220|sp|Q3AZM1|ATPA_SYNS9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78168359|gb|ABB25456.1| ATP synthase F1, alpha subunit [Synechococcus sp. CC9902]
          Length = 506

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 183/424 (43%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYIS-SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V        +      V  L Q    G+ +  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGSVLQVGDGIARVYGL-QQAMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRVIN+LG+PIDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGDAMLGRVINSLGRPIDGKGDIAASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            ++D     +   +G++   V   +E          +V+V A++ E   L+ +AP T  +
Sbjct: 186 NQADQDMICVYVAIGQKAASVANVVEVLRERGALGYTVIVAASASEPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDAATQQQLSRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|110225671|ref|YP_665677.1| ATP synthase F1 subunit alpha [Nephroselmis olivacea]
 gi|6066186|gb|AAF03204.1|AF110138_36 ATP synthase F1 subunit alpha [Nephroselmis olivacea]
          Length = 508

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 187/439 (42%), Gaps = 27/439 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  +   ++ L E   +N      V + G + S+      V  L++ +  G+ V      
Sbjct: 1   MSLSAGEISTLLEQRIQNYYMKVNVDEIGRVLSVGDGIARVYGLNK-IRAGEMVEFA--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +  D V I   G    I+ GD+V   G    +       GRV++ALGKPID
Sbjct: 57  SGVQGMALNLEYDNVGIVLFGADYLINEGDIVKRTGAIVDVPVGRGLLGRVVDALGKPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L        + +K P  + R+ V +  +TGI+ +D   P+  GQR  +      GK
Sbjct: 117 GKGALTDV-TRARVETKAPGIIERKSVHEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGK 175

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+++  + +   D       I   VG++   V + +           ++VV AT
Sbjct: 176 TSIAIDTIINQKSVNAGNDESKKLYCIYVAVGQKRSTVAQLVRILSEAGAMSYTIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++  L+ +AP +A  + EYF   G + L+I D +++ + + R+++      P    +P
Sbjct: 236 ASDAAPLQFLAPYSASAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER          G++T +  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERSCKRSDATGAGSMTGLPVIETQAGDVSAYIPTNVISITDGQIFLETE 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D 
Sbjct: 356 LFNKGNRPAINVGLSVSRVGSAAQIKAMKQVAGTLKLELAQYRE---VAAFAQFGSDLDA 412

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                +++   + + LKQ 
Sbjct: 413 ATQYLLNRGQRLTEILKQG 431


>gi|153001449|ref|YP_001367130.1| flagellum-specific ATP synthase [Shewanella baltica OS185]
 gi|151366067|gb|ABS09067.1| flagellar protein export ATPase FliI [Shewanella baltica OS185]
          Length = 445

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 159/443 (35%), Positives = 241/443 (54%), Gaps = 9/443 (2%)

Query: 1   MQKN----LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           MQ      L  L    +       V  G +  +  +    +       +G     +    
Sbjct: 1   MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASG--CRAPVGSLCSIETMAG 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
           + + +V+  + +++Y+ P+     +  G  V   G    ++      GRV++  G P+DG
Sbjct: 59  ELIAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L + D      S     ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 119 LGAL-QTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFIE+ LGD    +SVVV A +D SP++R  A
Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+
Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  
Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIE 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+A    S +  + +  +      +++ RD+  IG Y  G D  +D A+   P + 
Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL+Q+  D  S    Q +  +L
Sbjct: 418 AFLRQTMRDAFSFADSQVMLGQL 440


>gi|86146133|ref|ZP_01064459.1| flagellum-specific ATP synthase [Vibrio sp. MED222]
 gi|218708826|ref|YP_002416447.1| flagellum-specific ATP synthase [Vibrio splendidus LGP32]
 gi|85836080|gb|EAQ54212.1| flagellum-specific ATP synthase [Vibrio sp. MED222]
 gi|218321845|emb|CAV17818.1| Flagellum-specific ATP synthase [Vibrio splendidus LGP32]
          Length = 439

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 149/437 (34%), Positives = 238/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M +    L+Q   +  K+  +  G +  +  +    T       +G   + +  +     
Sbjct: 1   MLELANRLSQYKVEGLKSRPIASGKLVRVVGLTLEATG--CKAPIGSLCLVETMSGQMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        I       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGARVTPMTSESGIPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEQRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  K+SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + +AEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LAVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDSAFTLKPRLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q   +    D+   + K
Sbjct: 418 QKMKETVPYDMCVNMLK 434


>gi|84388114|ref|ZP_00991010.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01]
 gi|84377181|gb|EAP94051.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01]
          Length = 439

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 149/437 (34%), Positives = 238/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M +    L+Q   +  K+  +  G +  +  +    T       +G   + +  +     
Sbjct: 1   MLELANRLSQYKVEGLKSRPIASGKLVRVVGLTLEATG--CKAPIGSLCLVETMSGQMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        I       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGARVTPVTTESGIPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEQRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  K+SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTNAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + +AEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LAVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDSAFTLKPRLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q   +    D+   + K
Sbjct: 418 QKMKETVPYDMCVNMLK 434


>gi|325568950|ref|ZP_08145243.1| ATP synthase F1 sector alpha subunit [Enterococcus casseliflavus
           ATCC 12755]
 gi|325157988|gb|EGC70144.1| ATP synthase F1 sector alpha subunit [Enterococcus casseliflavus
           ATCC 12755]
          Length = 518

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 173/426 (40%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIKNYQNELSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   + + +
Sbjct: 66  LESNDVGIIILGDFETIREGDKVKRTGKIMEVPVGDALIGRVVNPLGQPIDGLGPI-ETN 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+T+      
Sbjct: 125 KSRPVEAAAPGVMQRKSVSEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTTIAIDAII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKDSTVRAQVETLRRYGALDYTIVVSAGASQPAPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  I  +V SI DG I L   L   G  P V    SVS
Sbjct: 305 SDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLENDLFYSGVRPAVAAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAETQAKLNRGRRTVEILK 421

Query: 419 QSPSDL 424
           Q   + 
Sbjct: 422 QKLHEP 427


>gi|119416490|emb|CAI34836.1| ATP synthase alpha chain, mitochondrial precursor [Polytomella sp.
           Pringsheim 198.80]
          Length = 562

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 102/435 (23%), Positives = 182/435 (41%), Gaps = 23/435 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           QK +  + +  + Y    V+  G + S+      V  L + V  G+ V     +S   G 
Sbjct: 64  QKLIPAVKEWEKSYQPP-VIHLGRVLSVGDGIARVYGL-KSVQAGELVCF---DSGVKGM 118

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V +   G    I  GDLV+  G+   +       GRV + LG+PIDG   L 
Sbjct: 119 ALNLQADHVGVVVFGNDSVIHQGDLVYRTGQIVNVPIGPGTLGRVTDGLGQPIDGKGPLT 178

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG------- 173
               S+ +  K P  + RQ V +   TG++ +D   P+  GQR  +      G       
Sbjct: 179 NVRSSL-VEVKAPGIIARQSVREPLFTGVKAVDALVPIGRGQRELIIGDRQTGKTAVAID 237

Query: 174 ---KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPI 229
                   +           +   VG++   V + ++ +      + +++V AT+ ++  
Sbjct: 238 AIIHQKNCNEQVPKAQRVYCVYVAVGQKKSTVAQLVKLFTQTGAMRYTIMVSATASDAAP 297

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +   +AEYF   G + L+I D +++ + + R+++      P    +P  VF  
Sbjct: 298 LQFLAPYSGCAMAEYFRDTGKHGLIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYL 357

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER     KE   G++TA   +     + +  IA +V SI DG I L   L  +G 
Sbjct: 358 HSRLLERAAKLSKELGGGSLTAFPVIETQAGDVSAYIATNVISITDGQIFLETELFYKGI 417

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      +
Sbjct: 418 RPALNVGLSVSRVGSAAQFPGMKQVAGTLKLELAQYRE---VAAFAQFGSDLDAATQYVL 474

Query: 408 HQVPIIYDFLKQSPS 422
            +   + + LKQ   
Sbjct: 475 ERGARLTEMLKQKQF 489


>gi|294625830|ref|ZP_06704446.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599858|gb|EFF43979.1| type III secretion system ATPase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 448

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 168/431 (38%), Positives = 242/431 (56%), Gaps = 15/431 (3%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +     + G +  +      V  +   V LG+    + ++   L   +V+  + D+
Sbjct: 14  RELATLAFGRRYGKVVEVVGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRDL 71

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +S    V   GR   +       GRV++ LG+P DG  ++   D  + I
Sbjct: 72  ALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI-ACDTWVPI 130

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  M R+ +E+   TG+R++D  T L  GQR+G+FA +G+GKSTL+ MFAR    D
Sbjct: 131 QAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCD 190

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I L+GERGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  
Sbjct: 191 VNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRD 250

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 251 RGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGEN--GSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL + D  +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+SR+  +   +
Sbjct: 309 TAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSRVMSQIVPS 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV------PIIYDFLKQSP 421
           D  +    L  L+ ++ E   +  +G YR G D + D+A+ ++        I DFL Q  
Sbjct: 369 DHSQAAGQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIDKFDAIRDFLSQPT 428

Query: 422 SDLSSEDVFQE 432
             LS+ D   E
Sbjct: 429 DQLSAYDSTLE 439


>gi|302381244|ref|YP_003817067.1| ATP synthase F1 subunit alpha [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191872|gb|ADK99443.1| ATP synthase F1, alpha subunit [Brevundimonas subvibrioides ATCC
           15264]
          Length = 511

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/448 (22%), Positives = 181/448 (40%), Gaps = 27/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +    N      V   G + S+      +  L   V  G+ +      
Sbjct: 1   MDIRAAEISAILKSQIANFGVEADVSDVGQVLSVGDGIARIHGL-DNVQAGEMIEFPKAG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V     G   +I+ GD V   G    +       GRV+N LG+PID
Sbjct: 60  --VKGMALNLERDNVGAVIFGADAQIAEGDEVRRLGEIVDVPVGKGLLGRVVNPLGEPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ ID   P+  GQR  +     IGK
Sbjct: 118 GKGPIQFTE-RRRVDVKAPGIIPRKSVHEPMQTGLKAIDTLIPVGRGQRELIIGDRQIGK 176

Query: 175 -----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                  +L+  + +            I   +G++   V + ++          ++VV A
Sbjct: 177 TAVAIDAILNQKSINVEGASEGEKLYCIYVAIGQKRSTVAQIVKTLEERGALDYTIVVAA 236

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ E   L+ +AP     + E+F   G + L+I D +++ A + R+++      P    Y
Sbjct: 237 TASEPAPLQFLAPFAGTAMGEFFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ G+   TA+  +    ++ +  I  +V SI DG I L  
Sbjct: 297 PGDVFYLHSRLLERSAKLNEDNGSGSLTALPIIETQANDVSAYIPTNVISITDGQIFLES 356

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A     K++  S+   + ++ E   +     +   +D
Sbjct: 357 DLFYQGIRPAVNVGISVSRVGSSAQIKAMKQVAGSIKGELAQYRE---MAAFAKFGSDLD 413

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +   + + +   + + LKQ      + +
Sbjct: 414 VSTQQLLARGARLTELLKQPQYSPLTVE 441


>gi|119188523|ref|XP_001244868.1| hypothetical protein CIMG_04309 [Coccidioides immitis RS]
          Length = 555

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPEMLGRVVDALGNPIDGKGPIKTTEKRRA-QLKAPGILPRK 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 187 SVNQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSSDETKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K  +VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDAMKYCIVVAATASEAAPLQYIAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 307 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSSAQL 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQ 478


>gi|28211328|ref|NP_782272.1| flagellum-specific ATP synthase [Clostridium tetani E88]
 gi|28203768|gb|AAO36209.1| flagellum-specific ATP synthase [Clostridium tetani E88]
          Length = 446

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 158/429 (36%), Positives = 241/429 (56%), Gaps = 12/429 (2%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQVIRINLDIVY 71
           +    +     G +  +  +   V  +     +G+      + N+  + +V+    D V 
Sbjct: 18  KIKETDYYSYEGVVKKVIGLTIEVEGI--KAFIGEVCTIYNQQNNPIVCEVVGFVEDNVI 75

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+G    I+ G  V   G    +  S    G+V++ LG P++G+    K  +   +  
Sbjct: 76  LMPLGELIGIAPGCRVIPSGNPLSVKCSEELFGKVLDGLGSPLNGEK--IKTGVPYPLDR 133

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  + R+R++    TG+R ID +     GQRIG+FAGSG+GKST L M A+    D  
Sbjct: 134 EPPDPLKRRRIKDVIPTGVRAIDGYLTCGEGQRIGIFAGSGVGKSTSLGMIAKYAEADVN 193

Query: 191 IISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I L+GERGREV +F+ +D   + +KKS+V+ ATSD+  ++R     TA  IAEYF  KG
Sbjct: 194 VICLIGERGREVLDFVEKDLGEEGMKKSIVICATSDKPALVRIKGAFTATAIAEYFRDKG 253

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LPRL+ER G S+K  G+ITA
Sbjct: 254 KKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSDK--GSITA 311

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D L+S+SRL ++    + 
Sbjct: 312 FYTVLVDGDDFNEPIADAVRGILDGHIVLSRDLAAKNHYPAIDILSSISRLMNEISVKEH 371

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           K+  S    LI  ++E  D+  IG Y  G +  +D A+  +  I +FL Q   +    + 
Sbjct: 372 KESASIGRDLIATYKEAEDLINIGAYVKGSNEKIDIAIKYIDSINEFLTQKVDE---HNN 428

Query: 430 FQEITKKLQ 438
           F+E  + L 
Sbjct: 429 FEESIQWLN 437


>gi|11466784|ref|NP_039380.1| ATP synthase CF1 alpha subunit [Oryza sativa Japonica Group]
 gi|50233968|ref|YP_052746.1| ATP synthase CF1 alpha subunit [Oryza nivara]
 gi|171259300|ref|YP_654212.2| ATP synthase CF1 alpha chain [Oryza sativa Indica Group]
 gi|68565034|sp|Q6ENH7|ATPA_ORYNI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|148886606|sp|P0C2Z4|ATPA_ORYSA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|148886607|sp|P0C2Z5|ATPA_ORYSI RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|148886608|sp|P0C2Z6|ATPA_ORYSJ RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|11979|emb|CAA33993.1| ATPase alpha subunit [Oryza sativa Japonica Group]
 gi|32487323|emb|CAE05898.1| OSJNBa0061C08.5 [Oryza sativa Japonica Group]
 gi|49614992|dbj|BAD26775.1| ATPase alpha subunit [Oryza nivara]
 gi|226696|prf||1603356X ATPase alpha
          Length = 507

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQDVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|157163914|ref|YP_001465995.1| flagellum-specific ATP synthase [Campylobacter concisus 13826]
 gi|112801755|gb|EAT99099.1| flagellar protein export ATPase FliI [Campylobacter concisus 13826]
          Length = 435

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 170/438 (38%), Positives = 249/438 (56%), Gaps = 8/438 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQ 61
           +LE +    ++  K L    G I+ IT+    +T L     +GD V  V + K+ + LG 
Sbjct: 2   SLERINSRLKEGVK-LSNTFGVITKITATTIEITGLRP--SIGDIVRIVAKDKSKNGLGM 58

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V +I  D  YI P G  E   +GD V+   +   I       GRV++   KPIDG  ++ 
Sbjct: 59  VTQIKTDGAYISPFGFVEGFRIGDFVYESDQGMSIPVGPNLLGRVVDPFMKPIDGKGAID 118

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +  M IM     AM R  + + F  GI+ ID       GQ++G+FAGSG+GKSTL+ M
Sbjct: 119 TTEY-MPIMRAPIDAMKRGLINEPFSVGIKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGM 177

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             ++      +++L+GERGREV EFIE  LG +L+ +V++VATSD+S ++RK     A++
Sbjct: 178 IVKNTLAPIKVVALIGERGREVPEFIEKNLGGDLEGTVIIVATSDDSSLMRKYGAFCAMS 237

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G++VL I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  
Sbjct: 238 VAEYFKQQGNDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAGKE 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+
Sbjct: 298 EG-KGSITAFFTVLVEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRV 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + K        L    +E   +  IG Y+ G D  LD A+ +   +  FLKQS
Sbjct: 357 MGDVIGKEHKLNAMKFKRLYSLLKENEVLLRIGAYQKGSDKELDLAISKKEFMESFLKQS 416

Query: 421 PSDLSSEDVFQEITKKLQ 438
             +  + +  +E+  K+ 
Sbjct: 417 SEESFALEEVEELLDKIN 434


>gi|291531906|emb|CBK97491.1| ATP synthase F1 subcomplex alpha subunit [Eubacterium siraeum 70/3]
          Length = 501

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 177/422 (41%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +    +DY   + ++  G + ++      +  L +   + + +  +          + + 
Sbjct: 12  IKSRIKDYGSKIRLEDTGTVVTVGDGIVRIHGLEK-CMMNELLEFENG---VRCMALNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G   EI  GD V   G    +       GRV+NALG+PIDG  ++   + +
Sbjct: 68  QDFVGAVMLGSDAEIKEGDTVKRTGSVVSVPVGEELLGRVVNALGQPIDGKGAILAKE-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P  + R+ V    +TGI+ ID   P+  GQR  +      GK+ +      + 
Sbjct: 127 RPIEKIAPGIITRKSVNVPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 186

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V   +E          ++VV AT+ E   L+ +AP +  T+ 
Sbjct: 187 KKTDVICIYVAIGQKASTVANVVEQLTAAGAMDYTIVVSATASELAPLQYIAPYSGCTMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG + L+I D +++ A + R ++      P    YP  VF    RLLER     +
Sbjct: 247 EYFMEKGKDALIIYDDLSKHAVAYRALSLLLKRPPGREAYPGDVFYLHSRLLERAANLNE 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+P  SVSR+
Sbjct: 307 DYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFHSGVRPAVNPGISVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L     +F E +       +   +D    + + +   I + LKQ 
Sbjct: 367 GGNAQIKAMKKVSGTLKLEYSQFRELQ---SFSQFGSDLDKDTKERLAKGERIVEILKQG 423

Query: 421 PS 422
            +
Sbjct: 424 QN 425


>gi|74096071|ref|NP_001027729.1| ATP synthase alpha-subunit [Ciona intestinalis]
 gi|18143645|dbj|BAB79706.1| ATP synthase alpha-subunit [Ciona intestinalis]
          Length = 554

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 106/452 (23%), Positives = 191/452 (42%), Gaps = 29/452 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           ++    L+ + E             + G + +I      V  L + +   + V  +   S
Sbjct: 46  KQGAAELSSILEQRILGTAPSEDLTETGRVLTIGDGIARVHGL-RNIQAEEMVEFE---S 101

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +  D V I   G    I  GD V   G    +       GRV++ALG P+DG
Sbjct: 102 GLKGMALNLEKDNVGIVVFGNDRNIKEGDTVKRTGAIVDVPVGEEILGRVVDALGNPLDG 161

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              L    L   +  K P  + R  V +  +TG++ ID   P+  GQR  +      GK 
Sbjct: 162 KGPLN-TKLRRRVDIKAPGIIARVSVSEPMQTGLKAIDSLVPIGRGQRELIIGDRQTGKT 220

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATS 224
                T+++    +   D       I   VG++   + + I+     D++K S+VVVA++
Sbjct: 221 AVAIDTIINQKRFNVGTDEKKKLYCIYVAVGQKQSTITQLIQRLESTDSMKYSIVVVASA 280

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
             +  L+ +AP +A ++ EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 281 AYAAPLQYLAPYSATSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 340

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER          G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 341 DVFYLHSRLLERAAKMSDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETEL 400

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  ++   + ++ E   +     +   +D  
Sbjct: 401 FHKGIRPAINVGLSVSRVGSAAQIKGMKQVSGTMKLDLAQYRE---VAAFAQFGSDMDAA 457

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             + +++   + + LKQ     S  D+ ++I 
Sbjct: 458 TQQLLNRGVRLTELLKQIQ--YSPMDIAEQIV 487


>gi|121603170|ref|YP_980499.1| F0F1 ATP synthase subunit alpha [Polaromonas naphthalenivorans CJ2]
 gi|190358145|sp|A1VIV0|ATPA1_POLNA RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|120592139|gb|ABM35578.1| ATP synthase F1 subcomplex alpha subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 517

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 104/453 (22%), Positives = 189/453 (41%), Gaps = 29/453 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+      +  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVADGIVRIHGLSD-VMQGEMLEFPATA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112
             +   G  + +  D V    +G  E I+ GD V   GR    P      GRV+NALG+P
Sbjct: 60  DGTPTYGLALNLERDSVGSVILGEYEHIAEGDTVKCTGRILEVPIGPELLGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    LS  I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKLSDVIEKVAPGVIARKSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIINQKGKGVSCVYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER     ++              G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNEKYVEDFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKNLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +D    K + +   + + LKQS     S   
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQSQYSPLSVST 448


>gi|110004064|emb|CAK98403.1| atp synthase alpha chain protein [Spiroplasma citri]
          Length = 523

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 109/429 (25%), Positives = 182/429 (42%), Gaps = 15/429 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E + +  ++Y K + + + G + ++      +  L     + + ++      +  G V+ 
Sbjct: 10  EIIKKQIKEYGKKIEIHEEGTVVTVGDGIALIDGL-DNAMMSELLIFPN---EIYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G    +  GD V   G+           GRV+NALG+PIDG   L K  
Sbjct: 66  LEEGAVGAVLMGDDTTVREGDQVRRSGKIVETPVGDALLGRVVNALGQPIDGKGPL-KAK 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +    P  M R+ V++  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 125 KTRPVERIAPGVMTRKSVDEPMETGIMTIDAMIPIGKGQRELIIGDRQTGKTAIGIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++   V + +E        + + VV AT+ E   L+ +AP T VT
Sbjct: 185 NQKGKNVKCIYVAIGQKASTVAQIVEKLRAAGALEYTTVVSATASELAPLQYLAPYTGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +   G+NV++I D +++ A + R +A      P    YP  VF    RLLER    
Sbjct: 245 IGEEWMESGENVIIIYDDLSKHAVAYRTMALLLHRPPGREAYPGDVFYLHSRLLERAARV 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K    G+ITA+  +     + +  I  +V SI DG I LN      G  P VD   SVS
Sbjct: 305 TKGYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLNNDQFNAGIRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  SL   + ++ E +       +   +D    + +     + + LK
Sbjct: 365 RVGSTAQIKAMKQVAGSLKLELAQYRELQ---AFAQFGSDLDDATKEVLEHGKRVIEILK 421

Query: 419 QSPSDLSSE 427
           Q      S+
Sbjct: 422 QKQYSPLSQ 430


>gi|57652127|ref|YP_186912.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus COL]
 gi|151222221|ref|YP_001333043.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|81170376|sp|Q5HE95|ATPA_STAAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|172048987|sp|A6QIU9|ATPA_STAAE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|57286313|gb|AAW38407.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           COL]
 gi|150375021|dbj|BAF68281.1| ATP synthase F1, alpha subunit [Staphylococcus aureus subsp. aureus
           str. Newman]
          Length = 502

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G    I+ GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGSAQINAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTASKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|223043977|ref|ZP_03614018.1| ATP synthase F1, alpha subunit [Staphylococcus capitis SK14]
 gi|222442692|gb|EEE48796.1| ATP synthase F1, alpha subunit [Staphylococcus capitis SK14]
          Length = 503

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   +IS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYNDISEGDEVKRTGRIMEVPVGDELIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP + VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDELGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAQKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|117919793|ref|YP_868985.1| flagellum-specific ATP synthase [Shewanella sp. ANA-3]
 gi|117612125|gb|ABK47579.1| flagellar protein export ATPase FliI [Shewanella sp. ANA-3]
          Length = 445

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 157/443 (35%), Positives = 240/443 (54%), Gaps = 9/443 (2%)

Query: 1   MQKN----LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           MQ      L  L    +       V  G +  +  +    +       +G     +    
Sbjct: 1   MQNRRHQLLNKLNHCIDKVPPFRAVASGQLVRVVGLTLEASG--CRAPVGSLCSIETMAG 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
           + + +V+  + +++Y+ P+     +  G  V   G    +S      GRV++  G P+DG
Sbjct: 59  ELIAEVVGFDDELLYLMPIEELRGVLPGARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L   +      S     ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 119 LGALS-TEQQAPRHSNAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ LVGERGREV+EFIE+ LG+    +SVVV A +D SP++R  A
Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             T+  IAEYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+
Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G     +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  
Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIE 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+A    S +  + +  +      +++ +D+  IG Y  G D  +D A+   P + 
Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL+Q+  D  S    Q +  +L
Sbjct: 418 AFLRQTMRDAFSFADSQVMLGQL 440


>gi|299890923|gb|ADJ57422.1| ATP synthase CF1 alpha subunit [uncultured prymnesiophyte C19847]
          Length = 500

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 101/422 (23%), Positives = 177/422 (41%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y + + +   G +  +      V  L Q V  G+ +  + K    +G  + + 
Sbjct: 13  IRQQIESYDQEVQIDNVGTVLQVGDGIARVYGLEQ-VMAGELLEFEDK---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G +I  G  V   G+  ++     + GRV++AL +PIDG   +   +  
Sbjct: 69  NDNVGAVLMGTGLDILEGSSVRSTGKIAQVPVGDGFLGRVVDALARPIDGKGDVASTESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+++      + 
Sbjct: 129 L-VESIAPGIITRKSVCEPVQTGITAIDAMIPIGRGQRELIIGDRQTGKTSVAVDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   VG++   V E +           +++V A +D+   L+ +AP T   +A
Sbjct: 188 KGEDVVCVYVAVGQKASSVAEVVTALEERGAGAYTIIVAANADDPATLQYIAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G   L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYNGKATLIIYDDLSKQASAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     +    I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGGGSMTALPIIETQAGDVAAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDQATQNELARGQRLREMLKQP 424

Query: 421 PS 422
            +
Sbjct: 425 QN 426


>gi|229328251|ref|YP_002860264.1| ATP synthase F1 subunit alpha [Megaceros aenigmaticus]
 gi|186695220|gb|ACC86787.1| ATP synthase F1 subunit alpha [Nothoceros aenigmaticus]
          Length = 513

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 94/430 (21%), Positives = 172/430 (40%), Gaps = 24/430 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V   S  +  G+ V      S   G  + + 
Sbjct: 13  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYG-SNKIQAGEMVEFA---SGVKGMALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +LG  +  
Sbjct: 69  KENVGIVVFGSDTAIKEGDIVRRTGSIVDVPVGKAILGRVVDALGVPIDGKGALGAVE-R 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----------- 174
             +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK           
Sbjct: 128 RRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQREPIIGDRQTGKTAVAIDTISNQ 187

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
             + +    +      +   +G++   V + ++        +  +++ A++ +   L+ +
Sbjct: 188 KEINAQGTSNSEKLYCVYVAIGQKRSTVAQLVKTLSEAGALEYCIILAASASDHAPLQFL 247

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RL
Sbjct: 248 APYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYPHSRL 307

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            ER      +   G++TA+  +     + +  I  +V  I DG I L   L   G  P +
Sbjct: 308 SERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQIFLETELFYRGIRPAI 367

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++  SL   + ++ E   +     +    D       ++  
Sbjct: 368 NAGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAASAQFGSDPDAATKYLSNRGA 424

Query: 412 IIYDFLKQSP 421
            + +  KQ  
Sbjct: 425 RLTEVPKQPQ 434


>gi|294656745|ref|XP_459057.2| DEHA2D13398p [Debaryomyces hansenii CBS767]
 gi|199431708|emb|CAG87225.2| DEHA2D13398p [Debaryomyces hansenii]
          Length = 545

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 174/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+      V  L+      + V      S   G  + +    V I   G    +
Sbjct: 64  ETGRVLSVGDGIARVFGLN-NCQASELVEF---TSGVKGMALNLEAGQVGIVLFGSDRAV 119

Query: 82  SLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G+ V   G+    P      GRV++ LG PIDG   L     S     K P  + R  
Sbjct: 120 KEGETVKRTGKIVEVPTGPELLGRVVDGLGNPIDGKGPLNASSTSKA-EVKAPGILPRTS 178

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    +D  D       
Sbjct: 179 VFEPMQTGLKSVDALVPVGRGQRELIIGDRQTGKTTVALDTILNQKRWNDGKDESKKLYC 238

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   V + ++     D LK S++V AT+ E+  L+ +AP TA  I E+F   G
Sbjct: 239 VYVAIGQKRSTVAQLVQTLEQNDALKYSIIVAATASEAAPLQFLAPFTACAIGEWFRDNG 298

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + ++  D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 299 RHAMITYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDANGGGSL 358

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 359 TALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 418

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 419 AMKQVAGSLKLYLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTNILKQKQ 469


>gi|118430299|ref|YP_874733.1| ATP synthase CF1 alpha subunit [Agrostis stolonifera]
 gi|125987712|sp|A1EA05|ATPA_AGRST RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|118201208|gb|ABK79577.1| ATP synthase CF1 alpha subunit [Agrostis stolonifera]
          Length = 505

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 187/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E Y++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQYNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  NLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGKGEIIAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESAAPSIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +     VI     +G+R   V + +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQNVICVYVAIGQRASSVAQVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|57115597|gb|AAW33105.1| F1-ATPase alpha subunit [Plantago sericea]
          Length = 410

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDGLGLPIDGKGALGAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKTLNSRATSENERLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              VG++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LK++ 
Sbjct: 356 MKEVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKRAQ 405


>gi|86136461|ref|ZP_01055040.1| ATP synthase subunit A [Roseobacter sp. MED193]
 gi|85827335|gb|EAQ47531.1| ATP synthase subunit A [Roseobacter sp. MED193]
          Length = 512

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 183/442 (41%), Gaps = 30/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  +    Q AE      V + G + S+      V  L   V  G+ V   G     +G
Sbjct: 12  LKDQINNFGQEAE------VAEIGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG---IMG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V I   G   +I  GD V        +       GRV++ LG P+DG   +
Sbjct: 62  MALNLEADNVGIVIFGSDRDIKEGDTVKRTNSIVDVPVGPELLGRVVDGLGNPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                 +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK     
Sbjct: 122 NAAKRGVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGKTAIAL 180

Query: 175 STLLSMFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDE 226
            T+L+  + +D            +   VG++   V + ++          S+VV AT+ +
Sbjct: 181 DTMLNQKSYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEESGAMEYSIVVAATASD 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP  A  +AEYF   G + L+I D +++ A + R+++      P    YP  V
Sbjct: 241 PAPLQFLAPYAATAMAEYFRDNGKHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDV 300

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER     ++   G++TA+  +   G + +  I  +V SI DG I L   L  
Sbjct: 301 FYLHSRLLERSAKLNEDFGAGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLETELFY 360

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D    
Sbjct: 361 QGIRPAVNTGLSVSRVGSSAQTNSMKSVAGPVKLELAQYRE---MAAFAQFGSDLDAATQ 417

Query: 405 KAVHQVPIIYDFLKQSPSDLSS 426
           + +++   + + +KQ+     +
Sbjct: 418 QLLNRGARLTELMKQAQYSPLT 439


>gi|229915482|gb|ACQ90826.1| CF1 alpha subunit of ATP synthase [Pedinomonas minor]
          Length = 506

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 96/428 (22%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y++ + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRQQIEQYTQEVKVVNVGTVFQVGDGIARIYGLEK-VMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  ++     + GR+++ L  PIDG   +    
Sbjct: 67  LESKNVGAVLMGEGRSVREGSSVRATGKIAQVPVGDAFLGRIVSPLAVPIDGKGEIPAQG 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 SRL-IESGAPGIISRRSVHEPLQTGLVSIDAMIPIGRGQRELIIGDRQTGKTAVAVDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   + + +           +++V AT+D    L+ +AP T   
Sbjct: 186 NQKGKGVICVYVAIGQKASSIAQVVNSLNERGAMDYTIIVAATADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F   G + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEHFMYTGRHTLVIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NDALGSGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQTKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDQATQNQLARGQRLRELLK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQASPLS 430


>gi|303323773|ref|XP_003071878.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240111580|gb|EER29733.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320031831|gb|EFW13789.1| ATP synthase subunit alpha [Coccidioides posadasii str. Silveira]
          Length = 555

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPEMLGRVVDALGNPIDGKGPIKTTEKRRA-QLKAPGILPRK 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 187 SVNQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSSDETKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K  +VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDAMKYCIVVAATASEAAPLQYIAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 307 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSSAQL 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQ 478


>gi|154308715|ref|XP_001553693.1| hypothetical protein BC1G_07780 [Botryotinia fuckeliana B05.10]
 gi|150852731|gb|EDN27923.1| hypothetical protein BC1G_07780 [Botryotinia fuckeliana B05.10]
          Length = 561

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 177/422 (41%), Gaps = 29/422 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  +S  V   + V      S   G  + +    V +   G    
Sbjct: 71  AETGRVLSVGDGIARVHGMS-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 126

Query: 81  ISLGDLVFHWGRFR--------ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           +  G+ V   G           +       GRVI+ALG PIDG   +   +       K 
Sbjct: 127 VKEGETVKRTGEIVSFINFHVDVPVGMEMLGRVIDALGNPIDGKGPIKTTEKRRA-QLKA 185

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCF 187
           P  + RQ V +  +TG++ +D   P+  GQR  +      GK       +L+    +D  
Sbjct: 186 PGILPRQSVNQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNDGN 245

Query: 188 D-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTI 241
           D       +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T  +I
Sbjct: 246 DETKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGTSI 305

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER     
Sbjct: 306 GEYFRDNGKHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMN 365

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR
Sbjct: 366 DKLGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSR 425

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  SL   + ++ E   +     +   +D    + +++   + + LKQ
Sbjct: 426 VGSAAQLKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQ 482

Query: 420 SP 421
             
Sbjct: 483 KQ 484


>gi|34539425|gb|AAQ74596.1| F1-ATPase alpha subunit [Sagittaria latifolia]
          Length = 415

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 100/410 (24%), Positives = 175/410 (42%), Gaps = 22/410 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L Q    G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLKQIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  SL + +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKSLLGRVVDALGVPIDGKGSLSENE-RRRVEVKAPGIIERRSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGE 197
           G++ +D   P+  GQR  +      GK+ +          L+  A+ +     +   +G+
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNKKAKENDKLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER     +E   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           SL   + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNKGERLTEVLKQPQYEP 402


>gi|326693457|ref|ZP_08230462.1| F0F1 ATP synthase subunit alpha [Leuconostoc argentinum KCTC 3773]
          Length = 504

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 112/426 (26%), Positives = 176/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +   L V + G ++ I       T L+  V  G+ +          G    
Sbjct: 10  ALIKQQLEKFDTTLTVEEVGTVTYIGDGVARATGLA-NVMAGELLEFANG---TFGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  ++I  GD V   GR   +       GRV+NALG+PIDG   + K D
Sbjct: 66  LESSEVGIIILGDYDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGMGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPVEVKAPGVMERKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAMDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D    VI   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKDQDMIVIYVAIGQKDSTVRTQVETLRQLGAMDYTIVVNAGPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G NVL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKNVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLDAEQFYAGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLASFRELESFAQFG---SDLDAATQAKLARGRRTVEVLK 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPLHQP 427


>gi|268619126|gb|ACZ13339.1| ATP synthase alpha chain [Bursaphelenchus xylophilus]
          Length = 542

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 175/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 52  ETGKVLSIGDGIARVYGL-KNIQAEEMVEF---DSGMKGMALNLEPDNVGVVVFGNDKVI 107

Query: 82  SLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G            GRV++ALG PIDG   + K      +  K P  + R  
Sbjct: 108 REGDVVKRTGSIVDVAVGQGLLGRVVDALGNPIDGKGPV-KDTKRSRVEVKAPGIIPRIG 166

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V +   TG++ +D   P+  GQR  +      GK+ +      +                
Sbjct: 167 VREPMLTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNEAGEDKKKLYC 226

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K +++V AT+ ++  L+ +AP +   + EYF   G
Sbjct: 227 IYVAIGQKRSTVAQIVKRLTDADAMKYTIIVSATASDAAPLQFLAPYSGCAMGEYFRDNG 286

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 287 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNETHGGGSL 346

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 347 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 406

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 407 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 457


>gi|268569758|ref|XP_002640606.1| Hypothetical protein CBG08717 [Caenorhabditis briggsae]
          Length = 537

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +++D V +   G  + I
Sbjct: 54  ETGKVLSIGDGIARVYGL-KNIQAEEMVEF---DSGIKGMAMNLDVDNVGVVVFGNDKVI 109

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +     S  +  K P  + R  
Sbjct: 110 REGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPINSAKRSR-VEVKAPGIIPRLS 168

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TG++ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 169 VREPMLTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFC 228

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + ++          ++VV AT+ ++  L+ +AP +   + E+F   G
Sbjct: 229 IYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEFFRDNG 288

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 289 KHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNTLGGGSL 348

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 349 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 408

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 409 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 459


>gi|302880127|ref|YP_003848691.1| ATP synthase F1, alpha subunit [Gallionella capsiferriformans ES-2]
 gi|302582916|gb|ADL56927.1| ATP synthase F1, alpha subunit [Gallionella capsiferriformans ES-2]
          Length = 513

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 187/441 (42%), Gaps = 30/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +   ++ L     +N          G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MKLDPSEISNLIRSRIENFEALTQARTEGTVVSVTDGIVRVYGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR   +      CGRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGEYEHITEGDTVKCTGRILEVPVGPELCGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    ++ +I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKMTDKIEKVAPGVIERQSVDQPVQTGLKSIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   +           ++VV AT+ +S  ++
Sbjct: 176 TAVAIDAIINQKGQGITCIYVAIGQKASTVVNVVRKLEEHGALGYTIVVAATASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNVEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
           +D    K + +  ++ + +KQ
Sbjct: 413 LDEATRKQLERGKLVTELMKQ 433


>gi|308470912|ref|XP_003097688.1| hypothetical protein CRE_14174 [Caenorhabditis remanei]
 gi|308239806|gb|EFO83758.1| hypothetical protein CRE_14174 [Caenorhabditis remanei]
          Length = 537

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +++D V +   G  + I
Sbjct: 54  ETGKVLSIGDGIARVYGL-KNIQAEEMVEF---DSGIKGMAMNLDVDNVGVVVFGNDKVI 109

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +     S  +  K P  + R  
Sbjct: 110 REGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPINSAKRSR-VEVKAPGIIPRLS 168

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TG++ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 169 VREPMLTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFC 228

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + ++          ++VV AT+ ++  L+ +AP +   + E+F   G
Sbjct: 229 IYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEFFRDNG 288

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 289 KHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSL 348

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 349 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 408

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 409 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 459


>gi|195383092|ref|XP_002050260.1| GJ22050 [Drosophila virilis]
 gi|194145057|gb|EDW61453.1| GJ22050 [Drosophila virilis]
          Length = 550

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+  +   + V     +S   G  + +  D V +   G  + I
Sbjct: 67  ETGRVLSIGDGIARVYGLN-NIQADEMVEF---SSGLKGMALNLEADNVGVVVFGNDKLI 122

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG  ++   D    +  K P  + R  
Sbjct: 123 KQGDIVKRTGAIVDVPVGNELLGRVVDALGNAIDGKGAINTKD-RFRVGIKAPGIIPRVS 181

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 182 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALAIDTIINQKRFNDGQDESKKLYC 241

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++          +++V AT+ ++  L+ +AP +   + E+F  KG
Sbjct: 242 IYVAIGQKRSTVAQILKRLTDSGAMGYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDKG 301

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 302 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSL 361

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 362 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTK 421

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 422 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQ 472


>gi|83746950|ref|ZP_00943996.1| ATP synthase alpha chain [Ralstonia solanacearum UW551]
 gi|207722130|ref|YP_002252568.1| atp synthase alpha chain protein [Ralstonia solanacearum MolK2]
 gi|207744814|ref|YP_002261206.1| atp synthase alpha chain protein [Ralstonia solanacearum IPO1609]
 gi|300702511|ref|YP_003744111.1| ATP synthase, f1 sector subunit alpha [Ralstonia solanacearum
           CFBP2957]
 gi|83726370|gb|EAP73502.1| ATP synthase alpha chain [Ralstonia solanacearum UW551]
 gi|206587305|emb|CAQ17889.1| atp synthase alpha chain protein [Ralstonia solanacearum MolK2]
 gi|206596224|emb|CAQ63151.1| atp synthase alpha chain protein [Ralstonia solanacearum IPO1609]
 gi|299070172|emb|CBJ41463.1| ATP synthase, F1 sector, alpha subunit [Ralstonia solanacearum
           CFBP2957]
          Length = 513

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L         G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKTRIEGLKAGADAKNTGTVISVTDGICRIHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHISEGDEVKCTGRILEVPVGPELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKKTDV-IEKVAPGVIARQSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +         + ++VV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGIFCVYVAIGQKASTIANVVRKLEEHGALEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEHIEKITNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +   + + LKQ  
Sbjct: 413 LDDATRKQLERGRRVTELLKQPQ 435


>gi|268315889|ref|YP_003289608.1| ATP synthase F1, alpha subunit [Rhodothermus marinus DSM 4252]
 gi|262333423|gb|ACY47220.1| ATP synthase F1, alpha subunit [Rhodothermus marinus DSM 4252]
          Length = 534

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 97/434 (22%), Positives = 168/434 (38%), Gaps = 35/434 (8%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G +  +      +  L + V  G+ +          G  + +  D V +   G  +
Sbjct: 26  VYEVGTVLQVGDGIARIYGL-RGVGAGELIEFPRSG--VTGMALNLEEDNVGVVLFGEVD 82

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           ++  GD      R   I  S    GRVI+ LG P+DG   +G     M +  K P  + R
Sbjct: 83  KVKEGDEARRTRRVASILVSEEMLGRVIDPLGNPLDGKGPIGGEKYEMPLERKAPGVIYR 142

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVI 191
           + V +  +TGI+ ID   P+  GQR  +      GK+ +L     +  +          I
Sbjct: 143 EPVREPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAILVDTIINQKYTHQTDKPVYCI 202

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              VG++   V + +           +VVV A +     ++ +AP     I E+F   G 
Sbjct: 203 YVAVGQKASTVAQVVRALEEHGAMEYTVVVNAPASAPAPMQFIAPFAGACIGEFFRDTGR 262

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE--------- 301
           + L++ D +++ A + RE++      P    YP  +F    RLLER              
Sbjct: 263 HALVVYDDLSKQAVAYREVSLLLRRPPGREAYPGDIFYLHSRLLERAAKIISDDAVARQM 322

Query: 302 -----------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
                      K  G++TA+  +     + +  I  +V SI DG I L  +L   G  P 
Sbjct: 323 NNLPPSIKHLVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIYLESNLFNAGIRPA 382

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     KK+  +L   + ++ E         +   +D    + + + 
Sbjct: 383 INVGISVSRVGGSAQIKAMKKVAGTLRIELAQYRELE---AFAKFGSDLDPATQRQLRRG 439

Query: 411 PIIYDFLKQSPSDL 424
             + + LKQ     
Sbjct: 440 ERLVEVLKQGQYQP 453


>gi|169827123|ref|YP_001697281.1| flagellum-specific ATP synthase [Lysinibacillus sphaericus C3-41]
 gi|168991611|gb|ACA39151.1| Flagellum-specific ATP synthase [Lysinibacillus sphaericus C3-41]
          Length = 441

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 169/437 (38%), Positives = 254/437 (58%), Gaps = 14/437 (3%)

Query: 9   AQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-----VHQGKNSDNLGQV 62
           AQL E         + G ++ +  +   +        +GD            +   L +V
Sbjct: 4   AQLIEHIPHMPTFKKFGRVTRVVGLM--IESQGPDSSIGDVCKIHVETVNNGHQIILAEV 61

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    +IV + P     EIS+G LV   G    +       G+V++++G PIDG   L K
Sbjct: 62  VGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPELIGKVLDSMGNPIDGT-LLPK 120

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G +++      P  + R  + +  + G++ ID    + +GQR+G+FAGSG+GKSTLL M 
Sbjct: 121 GLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKSTLLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D  +I+L+GERGREVREFI  D   + L +S+VV ATSD+  ++R     TA  
Sbjct: 181 ARNTQADLNVIALIGERGREVREFIERDLGPEGLSRSIVVAATSDQPALMRIKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF ++G NV+L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G +
Sbjct: 241 IAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLLERTGTN 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           EK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L SVSRL
Sbjct: 301 EK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVLKSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + + KK    L  L + ++++ D+  IG Y+ G    +D+A+H  P+I  +LKQ 
Sbjct: 359 MNHVAAPEHKKAAERLRELYYTYDKSEDLINIGAYKRGTSREIDEAIHYEPLITTYLKQG 418

Query: 421 PSD-LSSEDVFQEITKK 436
             D ++ E+   E+   
Sbjct: 419 YLDKVTLEESVNELLSL 435


>gi|34539427|gb|AAQ74597.1| F1-ATPase alpha subunit [Saururus cernuus]
          Length = 418

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 173/412 (41%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD+V
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDIAIKEGDIV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             SL   + ++ E   +     +   +D +    +H+   + + LKQ   + 
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAVTQALLHRGARLTEVLKQPQYEP 405


>gi|241895227|ref|ZP_04782523.1| ATP synthase F1, alpha subunit [Weissella paramesenteroides ATCC
           33313]
 gi|241871533|gb|EER75284.1| ATP synthase F1, alpha subunit [Weissella paramesenteroides ATCC
           33313]
          Length = 503

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 107/439 (24%), Positives = 180/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +    N      V + G ++ I       T L +    G+ V  +   
Sbjct: 1   MSIKAEEISSLIKKQLANYQDDLTVKETGTVTYIGDGIARATGL-ENALAGELVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G  + I  GD V   GR   +       GRV+NALG+P+D
Sbjct: 59  --VYGMTQNLESNDVGIIILGSYDSIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D +  +  K P  M R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GMGPV-ETDKTRPVEVKAPGVMERKSVFEPLQTGLKAVDSLVPIGRGQRELIIGDRKTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +   + ++  + D    V+   +G++   VR  +E          ++VV A+  E   + 
Sbjct: 176 TSVAIDTILNQKDQDMIVVYVAIGQKASTVRTQVETLRRMGAMDYTIVVTASPSEPAPML 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGAAMGEEFMYNGKHVLIIYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L+      G  P
Sbjct: 296 RLLERAAKLSDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLDSDQFYAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     KK+  +L   +  ++E       G     +D      + +
Sbjct: 356 AIDAGTSVSRVGGDAQIKAMKKVAGTLRLDLASYKELESFAQFG---SDLDEATQVKLAR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
                + LKQ        +
Sbjct: 413 GRRTVELLKQPLHQPLPVE 431


>gi|317130749|ref|YP_004097031.1| ATP synthase F1 subunit alpha [Bacillus cellulosilyticus DSM 2522]
 gi|315475697|gb|ADU32300.1| ATP synthase F1, alpha subunit [Bacillus cellulosilyticus DSM 2522]
          Length = 499

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 106/435 (24%), Positives = 179/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + ++ L +   +       V   G +  I         L + V  G+ +      
Sbjct: 1   MSIRADEISSLIKKQIEGYQSEIEVSDVGTVIKIGDGIAVAHGL-ENVMAGELLEFSNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +  + V I  +G   +I  GD V   GR   +       GRV+N+LG+P+D
Sbjct: 59  --VMGMAQNLEENTVGIIILGPYTDIREGDEVRRTGRIMEVPVGEELLGRVVNSLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +   +  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GQGPI-ETTKTRPIESPAPGVMDRKSVHEPLQTGIKSIDALIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V   +E          ++VV A++ +   L 
Sbjct: 176 TAIAIDTILNQKDQDMICIYVAIGQKESTVAGVVETLRQHGALDYTIVVTASASQPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V++ E F   G +VL+I D +T+ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGVSMGEEFMYNGKHVLVIYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +KG  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDDKGAGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+  +L   +  + E         +   +D      +++
Sbjct: 356 AVNAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFAQFGSDLDKATQAKLNR 412

Query: 410 VPIIYDFLKQSPSDL 424
                + LKQ     
Sbjct: 413 GARTVEVLKQGLHQP 427


>gi|153956281|ref|YP_001397046.1| F0F1 ATP synthase subunit alpha [Clostridium kluyveri DSM 555]
 gi|189081293|sp|A5N3H9|ATPA_CLOK5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146349139|gb|EDK35675.1| AtpA [Clostridium kluyveri DSM 555]
          Length = 504

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 179/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    E Y K +  V  G I  I      V  L+     G+ +       D     + 
Sbjct: 10  SIIKSQIEKYEKKIETVDSGTIIQIGDGIARVYGLN-GCMAGELLEFPN---DVYAMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G+ V   G+   +       GRV+N+LG PIDG  ++   +
Sbjct: 66  LEQDNVGCVLLGSQEGIKEGNTVKRTGKVVEVPVGENIIGRVVNSLGHPIDGKGAISTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 -TRAVELVAPGVITRQAVKQPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAMDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   + + +  + +  ++VV A + ES  L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKQSTVAHIVNNLIETNAMDYTIVVSAAASESAPLQYIAPYAGCS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF +KG +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMNKGKDVLIVYDDLSKHAVAYRAMSLLLRRPPRREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     +    I  +V SI DG I L   L   G+ P ++   SVS
Sbjct: 305 SDKLGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFYSGQRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGNAQIKAMKQVAGTLRIDLAQYRE---LASFAQFGSDLDKESKRTLEKGKRLTEILK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|257466792|ref|ZP_05631103.1| F0F1 ATP synthase subunit alpha [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917940|ref|ZP_07914180.1| ATP synthase F1 sector subunit alpha [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313691815|gb|EFS28650.1| ATP synthase F1 sector subunit alpha [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 500

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E + +  E+Y K+L V   G +  +      +  LS  V   + +         +G  + 
Sbjct: 10  EIIKKEIENYKKSLDVKTSGTVLEVGDGIARIYGLS-SVMSNELLEFPNG---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G    I  GD V   GR    P      GRV+NALG+ IDG   +    
Sbjct: 66  LEENNVGAVILGNASLIKEGDGVKATGRVVSVPAGEGMLGRVVNALGEAIDGKGEIRPSK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K    ++RQ V +  +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 126 Y-MPVERKASGIISRQPVFEPLQTGLKSIDGMVPIGRGQRELIIGDRQTGKTAIALDAII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +  K I   +G++   + +  +          + +V AT+ E+  L+ +AP + V 
Sbjct: 185 NQKGNGVKCIYVAIGQKRSTIAQIFQKLEDAGAMEYTTIVAATASEAAPLQYLAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYNE---LLTFAQFGSDLDKATKAQLDRGNRIMEVLK 421

Query: 419 QSP 421
           Q+ 
Sbjct: 422 QAQ 424


>gi|294500936|ref|YP_003564636.1| flagellum-specific ATP synthase [Bacillus megaterium QM B1551]
 gi|294350873|gb|ADE71202.1| flagellum-specific ATP synthase [Bacillus megaterium QM B1551]
          Length = 437

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 169/426 (39%), Positives = 247/426 (57%), Gaps = 10/426 (2%)

Query: 9   AQLA-EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRI 65
           AQL  E    +   + G +S +  +   +        +GD   +H  +  D +  +V+  
Sbjct: 4   AQLIHEIPRTSSFKRYGKVSRVVGMM--IESRGPRTSIGDVCFIHLSERGDKIRAEVVGF 61

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           N + V + P      I  G LV    +  ++S      G+V+++LG P+DG   L     
Sbjct: 62  NGEHVILMPYTSVRYIGPGCLVETTEKPLQVSVGKELIGQVLDSLGNPLDGS-ELSHYLP 120

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            +      P  + R  +E+  + G+R ID    +  GQRIG+FAGSG+GKSTLL M AR+
Sbjct: 121 FVLTDQDPPNPLERPPIEQPIEVGVRTIDSLLTVGQGQRIGIFAGSGVGKSTLLGMIARN 180

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+LVGERGREVREFI  D   + LK+SVVVVATSD+  +LR  A  TA +IAE
Sbjct: 181 TKADINVIALVGERGREVREFIERDLGEEGLKRSVVVVATSDQPALLRMKAAYTATSIAE 240

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +V++++DS+TR A + REI    GE P  +GY  SVF+ LPRLLER G +  +
Sbjct: 241 YFRDEGLSVMMMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFASLPRLLERTGTN--Q 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA  +VLVDGD+ N+PI+D+VR I+DGHIVL+R LA +G+YP ++ L SVSR+ + 
Sbjct: 299 HGSITAFYTVLVDGDDMNEPISDTVRGIIDGHIVLDRELANKGQYPAINVLKSVSRVMNH 358

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S   K+    L  L+  +  + D+  IG Y+ G    +D+A+H  P+I  FLKQ  ++
Sbjct: 359 IVSERHKEAAEKLRSLMATYANSEDLINIGAYKRGSSAYIDEAIHYHPVIDAFLKQKTNE 418

Query: 424 LSSEDV 429
             S + 
Sbjct: 419 HPSFET 424


>gi|242910134|ref|YP_002970629.1| ATP synthase CF1 subunit alpha [Alsophila spinulosa]
 gi|218454803|gb|ACK77140.1| ATP synthase CF1 subunit alpha [Alsophila spinulosa]
          Length = 507

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 12  SIIRKQIEGYVPEVKVVNIGTVPQVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V   P G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 68  LESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 128 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + + ++        ++VV  T++    L+ +AP T   
Sbjct: 187 NQKGKNVICVYVAIGQKASSVAQVVNNFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 247 LAEYFMYRKQHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 307 SLQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 367 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 423

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 424 QSQSAPLSVE 433


>gi|242309920|ref|ZP_04809075.1| flagellum-specific ATP synthase [Helicobacter pullorum MIT 98-5489]
 gi|239523217|gb|EEQ63083.1| flagellum-specific ATP synthase [Helicobacter pullorum MIT 98-5489]
          Length = 432

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 165/419 (39%), Positives = 245/419 (58%), Gaps = 6/419 (1%)

Query: 7   TLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           +L  L E  +  NL    G ++ +   + +   LS    +GD V    +N +++G V  +
Sbjct: 2   SLTNLRERLNGLNLSPVFGLVTKVEQGFLSANGLSP--RIGDIVRITNENGNSMGMVTTL 59

Query: 66  NLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             +   I P    E   +GD V+ +    +I       GRVIN LG+PIDG   L + + 
Sbjct: 60  EANSFKITPFSFVEGTKVGDKVYLNTKGLQIPVGLELLGRVINPLGEPIDGKGEL-RAEG 118

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            M I+ +   AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R 
Sbjct: 119 LMPIIRQPIAAMKRGMIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRG 178

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                 +I+L+GERGREV EF+E  LG +L  +V+VVATSD+SP++RK     A+++AEY
Sbjct: 179 AQAKIKVIALIGERGREVPEFVEKNLGGDLTNTVLVVATSDDSPLMRKYGAFAAMSVAEY 238

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F +KG++VL ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E  K
Sbjct: 239 FKAKGEDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAGKEEG-K 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+RSL + G YPP++ L S SRL    
Sbjct: 298 GSITAYFTVLVEGDDMSDPIADQSRSILDGHIVLDRSLTDFGIYPPINILNSASRLMGDV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              +          L    +E   +  IG Y+ G D  +D+A+ +   + D+L+Q+  +
Sbjct: 358 AQKEHILAARKFRRLYSMLKENEVLIRIGAYQAGSDKEIDEAIAKKSDMEDYLRQNYDE 416


>gi|330819409|ref|YP_004348271.1| Type III secretion system ATPase [Burkholderia gladioli BSR3]
 gi|327371404|gb|AEA62759.1| Type III secretion system ATPase [Burkholderia gladioli BSR3]
          Length = 452

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 166/440 (37%), Positives = 241/440 (54%), Gaps = 11/440 (2%)

Query: 4   NLETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
           + E L    E    +   V + G +  +      V+ L   V LG+    +      L  
Sbjct: 13  DFERLTDAIEREILAVPAVARTGKVMEVVGTVIKVSGLD--VTLGELCELRSPEGVLLQR 70

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E +S    V   GR   I       GRV++ LG+PIDG   
Sbjct: 71  AEVVGFTRDVALLSPFARLEHVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPP 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    ++ + P  M R+ V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+
Sbjct: 131 LDSDDWR-PVIVQPPDPMKRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLM 189

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG D + +SVVV ATSD S + R  A  T
Sbjct: 190 GMFARGAACDINVIALIGERGREVREFIELILGPDGMARSVVVCATSDRSSMERAKAAHT 249

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 250 ATAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 309

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  +   G+ITA+ +VL + +   DP+A+ VR ILDGH++L+R +A   +YP +D L S+
Sbjct: 310 GMGQT--GSITALYTVLAEDETGGDPVAEEVRGILDGHMILSREIAARNQYPAIDVLGSL 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  S +  L+ +  E   +  +G Y+PG + + D+A+ +  +I +FL
Sbjct: 368 SRVMSLVVPDTHNRAASRVRELMAKHREVEVLLQVGEYQPGQNPVADEAIEKADVIREFL 427

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  SD +  +       +L
Sbjct: 428 CQRTSDYAPYEDTTNYLHQL 447


>gi|224020956|ref|YP_002608189.1| ATP synthase F1 subunit 1 [Carica papaya]
 gi|170522368|gb|ACB20478.1| ATP synthase F1 subunit 1 [Carica papaya]
          Length = 509

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 176/439 (40%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E+   N          G + S+      V+ L++ +  G+ V      S 
Sbjct: 5   PRASELTTLLENRLTNFYTNFQVDEIGRVVSVGDGIARVSGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVPKQPQ 435


>gi|299821859|ref|ZP_07053747.1| H(+)-transporting two-sector ATPase, F(1) alpha subunit [Listeria
           grayi DSM 20601]
 gi|299817524|gb|EFI84760.1| H(+)-transporting two-sector ATPase, F(1) alpha subunit [Listeria
           grayi DSM 20601]
          Length = 504

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V   G ++ I         L      G+ +         +G    
Sbjct: 10  SIIKQQIENYQSELKVSDVGTVTYIGDGIARAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   G+   +       GRV+N+LG PIDG   + +  
Sbjct: 66  LETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEALIGRVVNSLGLPIDGLGPI-ETS 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  + +  P  M RQ V++  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 ATRPVEAIAPGVMQRQSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     I   +G++   VR  +E          ++VV A++ +   L  +AP   V 
Sbjct: 185 NQADQDMICIYVAIGQKESTVRNAVETLRSHGALDYTIVVSASASQPAPLLYLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +    G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++P  SVS
Sbjct: 305 SEALGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINPGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLAAYRELE---SFSQFGSDLDAATRSRLERGKRTIEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QDLH 425


>gi|34539199|gb|AAQ74483.1| F1-ATPase alpha subunit [Arthropodium cirrhatum]
          Length = 418

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERASKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|254487628|ref|ZP_05100833.1| ATP synthase F1, alpha subunit [Roseobacter sp. GAI101]
 gi|214044497|gb|EEB85135.1| ATP synthase F1, alpha subunit [Roseobacter sp. GAI101]
          Length = 512

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 183/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG PID
Sbjct: 59  --IMGMALNLETDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPIGNGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIESTERGLA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLL------SMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +            +   D        +   +G++   V + ++       ++ S+VV 
Sbjct: 176 TAVALDAILNQQQVNAAAGDDESKKMYCVYVAIGQKRSTVAQLVKKLEETGAIEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   ++ +AP +A  +AE+F   G + L++ D +++ A S R+++      P    
Sbjct: 236 ATASEPAPMQYLAPYSATAMAEFFRDNGRHALIVYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E   G++TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLGDEAGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DASTQQLLNRGARLTELMKQPQYSPLT 439


>gi|50058567|gb|AAT69036.1| F1-ATPase alpha subunit [Astripomoea malvacea]
          Length = 430

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV         P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVXRTXSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|140325934|gb|ABO86590.1| ATPase alpha subunit [Brassica juncea]
          Length = 507

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 178/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|219670156|ref|YP_002460591.1| peptidase C14, ICE, catalytic subunit p20, active site
           [Desulfitobacterium hafniense DCB-2]
 gi|219540416|gb|ACL22155.1| Peptidase C14, ICE, catalytic subunit p20, active site
           [Desulfitobacterium hafniense DCB-2]
          Length = 433

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 165/431 (38%), Positives = 251/431 (58%), Gaps = 12/431 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDI 69
           L +    +L+V  G ++ I  +   +      V +G++  +H  +  +   +V+      
Sbjct: 8   LHKMSDLDLIVSHGRVAKIVGLM--IESDGPRVSVGEYCRIHTQQGKEIPAEVVGFRNST 65

Query: 70  VYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P+   E I+ GD V     +  +       GR+++ LG+P+DG   + + D    +
Sbjct: 66  TLLMPLAELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPMVTQRD--YPL 123

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P A  R R+      G+R +D    +  GQRIG+FAGSG+GKSTLL M AR+    
Sbjct: 124 QNAPPSAFLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAG 183

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+LVGERGRE+R+FI +D   + L++SV+VVATSD+  ++R  A  TA  IAEYF  
Sbjct: 184 VNVIALVGERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRD 243

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL++DS+TRFA + RE+   +GE P  RGYP SVF+ LP+LLER G SE   G+I
Sbjct: 244 QGQDVLLMMDSVTRFAMAQREVGLTAGEPPATRGYPPSVFAMLPKLLERSGMSE--IGSI 301

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLVDGD+HN+PIAD+VR ILDGHIVL R LA +  YP +D L SVSR+ +   + 
Sbjct: 302 TGIYTVLVDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAP 361

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + K+L   L   +  + + +D+  IG Y  G +  +D A+  +  I  FL+Q   +  S 
Sbjct: 362 EHKELAGKLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQDVEEKVS- 420

Query: 428 DVFQEITKKLQ 438
             F ++ ++LQ
Sbjct: 421 --FDQMLRQLQ 429


>gi|157964951|ref|YP_001499775.1| F0F1 ATP synthase subunit alpha [Rickettsia massiliae MTU5]
 gi|157844727|gb|ABV85228.1| ATP synthase alpha chain [Rickettsia massiliae MTU5]
          Length = 533

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 184/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 35  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 84

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 85  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDGKGDI 144

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 145 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 203

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 204 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 263

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 264 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 323

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     + KG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 324 LHSRLLERAAKMSEAKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 383

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 384 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 440

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+       E+    I
Sbjct: 441 IDHGKRLVEILKQAQYHPFPVEEQIVSI 468


>gi|153832446|ref|ZP_01985113.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio harveyi HY01]
 gi|148871241|gb|EDL70113.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio harveyi HY01]
          Length = 440

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 155/434 (35%), Positives = 234/434 (53%), Gaps = 12/434 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRIN 66
            Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+   
Sbjct: 10  TQQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQ 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
                + P+G    IS    V   G+   +       G++++ LG+P DG  S  +    
Sbjct: 68  QHHALLTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGSQS-TEPSAW 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS 
Sbjct: 127 YPVYRDAPPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSA 186

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +++L+GERGREVREFI  D   + + +SV+VVATSD   + R  A   A +IAEY
Sbjct: 187 DVDVTVLALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEY 246

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  
Sbjct: 247 FRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK-- 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++ 
Sbjct: 305 GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQI 364

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + 
Sbjct: 365 VDKTHQASAAHMREMLAKYEEVELLIKIGEYQHGADSRSDMAIAQGDDIRAFLRQGTHEP 424

Query: 425 SSEDVFQEITKKLQ 438
           S     +E   +L+
Sbjct: 425 SE---LEETVTQLR 435


>gi|330414746|gb|AEC13712.1| non-flagellar type III secretion system ATPase [Acidovorax
           citrulli]
          Length = 442

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 159/430 (36%), Positives = 236/430 (54%), Gaps = 13/430 (3%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  S  LV + G ++ +      V  L     LG+      +  + L   +V+      
Sbjct: 16  REIASAPLVRRSGKVAEVIGTLMRVNGLD--AKLGELCHVLDERGELLQAAEVVGFANGQ 73

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +  G  V   G    +       GRVI++LG+PIDG   L   + +  +
Sbjct: 74  SILSPFGSILGVRGGSAVVGLGEVLSVPVGPRLLGRVIDSLGQPIDGKGPLDCSE-TRPV 132

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  M R+ +E    TG++ ID    L  GQR+G+FA +G+GKSTL+ M AR    D
Sbjct: 133 FALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQRMGIFAPAGVGKSTLMGMLARGTQCD 192

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREF+      + + +SVVV ATSD S   R  A   A  +AEY+  
Sbjct: 193 VSVIALIGERGREVREFVEFILGEEGMARSVVVCATSDRSSSERAKAAHVATAVAEYYRD 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+E+PRLLER G     +G+I
Sbjct: 253 QGLKVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSVFAEIPRLLERAGMGA--RGSI 310

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+ +VL + ++ NDPI++ VR ILDGH++L+R +A   +YP +D L S+SR+  +    
Sbjct: 311 TALYTVLYEDESGNDPISEEVRGILDGHMILSRKIAARNQYPAIDVLGSLSRVMSQIVPR 370

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL--- 424
           + ++       L+ ++EE   +  +G YRPG D + D+A+ +   I DFL QS SDL   
Sbjct: 371 EHQQAGGRFRQLMAKYEEIEPLVQMGEYRPGNDPLADEAMEKHAAIRDFLNQSTSDLWDF 430

Query: 425 -SSEDVFQEI 433
             S D   +I
Sbjct: 431 GRSVDTLADI 440


>gi|55976782|sp|P68541|ATPAM_RAPSA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|55976783|sp|P68542|ATPAM_BRACM RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|3342502|gb|AAC78472.1| ATP synthase alpha subunit [Brassica rapa subsp. campestris]
 gi|140325874|gb|ABO86587.1| ATPase alpha subunit [Brassica juncea]
 gi|223950946|gb|ACN29367.1| ATP synthase subunit 1 [Brassica juncea]
 gi|223950948|gb|ACN29368.1| ATP synthase subunit 1 [Diplotaxis catholica]
 gi|223950950|gb|ACN29369.1| ATP synthase subunit 1 [Diplotaxis catholica]
          Length = 507

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 178/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|124022193|ref|YP_001016500.1| F0F1 ATP synthase subunit alpha [Prochlorococcus marinus str. MIT
           9303]
 gi|158512750|sp|A2C6X5|ATPA_PROM3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123962479|gb|ABM77235.1| ATP synthase F1, alpha subunit [Prochlorococcus marinus str. MIT
           9303]
          Length = 505

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   DY K++ V   G +  I      V  L Q V  G+ V  +       G  + 
Sbjct: 11  AILKQQISDYDKSVSVSNVGTVLQIGDGIARVYGLEQ-VMAGELVEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +  S    GRV+  LG+P+DG   +   +
Sbjct: 67  LEDDNVGAVLMGEGVGIQEGSTVKATGKIASVPVSDEMLGRVVTPLGQPMDGKGDIPSTE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 127 SRL-IESIAPGIIKRKSVHEPLQTGITSIDSMIPIGRGQRELIIGDRQTGKTAIAIDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   +E          +V+V A++ ++  L+ +AP T   
Sbjct: 186 NQKGEDVVCVYVAVGQKAASVANVVEVLREKGALDYTVIVAASASDAAALQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  KG   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAESFMYKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F+E   +     +   +D    K + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFDE---LAAFSQFASDLDEATQKQLGRGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|27461605|gb|AAM95219.1| ATPase F1 alpha subunit [Baloskion tetraphyllum]
          Length = 417

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESDTLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 401


>gi|126653443|ref|ZP_01725539.1| F0F1 ATP synthase subunit alpha [Bacillus sp. B14905]
 gi|126589799|gb|EAZ83932.1| F0F1 ATP synthase subunit alpha [Bacillus sp. B14905]
          Length = 502

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V + G +  I         L      G+ +         +G    
Sbjct: 10  SLIKQQIENYESELKVSEVGTVIRIGDGIALAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G   +I  GD V   GR   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEEGNVGIVILGPYTDIKEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S     M R+ V +  +TGI+ ID   P+  GQR  +     +GK+++      
Sbjct: 126 -SRPIESPAFGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQVGKTSVAIDTIL 184

Query: 184 SDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   VR  +E +        ++VV A + +   L  +AP   V+
Sbjct: 185 NQDGENMICIYVAIGQKESTVRGVVETFRKHGALDYTIVVTAAASQPAPLLFLAPFAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMLQGKHVLIVYDDLSKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NETYQNGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFNSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D I    + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLAAFRELESFAQFG---SDLDKITLAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDLN 425


>gi|298370409|ref|ZP_06981725.1| ATP synthase F1, alpha subunit [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281869|gb|EFI23358.1| ATP synthase F1, alpha subunit [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 515

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 191/444 (43%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISELIKAKIENLSVNTEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-QTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKDTDVICIYVAIGQKASSIANVVRKLEEYGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +++             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINQDEVEKLTDGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|297530603|ref|YP_003671878.1| flagellar protein export ATPase FliI [Geobacillus sp. C56-T3]
 gi|297253855|gb|ADI27301.1| flagellar protein export ATPase FliI [Geobacillus sp. C56-T3]
          Length = 422

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 154/424 (36%), Positives = 232/424 (54%), Gaps = 10/424 (2%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVG 76
           +  + G +S +  +            +GD      ++       +V+  +   V + P  
Sbjct: 1   MYKRFGKVSRVIGLMM--ESKGPKSSIGDLCYIHEQSGCRKIPAEVVGFHEQHVLLMPFS 58

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               I+ G  V   GR   +       G V++ LG+P+DG   L  G   + +    P  
Sbjct: 59  ATTHIAPGCFVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-LLPPGLKPVSVERDPPNP 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  + +  + GIRVID    +  GQR+G+FAGSG+GKSTL+ M AR    D  +I+L+
Sbjct: 118 LVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLMGMIARHTSADVNVIALI 177

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+  D   D L +SVVVVATSD+  ++R     TA  IAEYF  +G +V+L
Sbjct: 178 GERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYTATAIAEYFRDQGADVML 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +    G ITA  +VL
Sbjct: 238 MMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNAS--GTITAFYTVL 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SVSR+     SA+ ++  +
Sbjct: 296 VDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSVSRVMPHVISAEHREAAN 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
               L+  + ++ D+  IG Y+ G    +D+A+   P +  F +Q+  + ++  +    +
Sbjct: 356 RFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFCRQNIDEKTTRAESIDAL 415

Query: 434 TKKL 437
            + L
Sbjct: 416 LRLL 419


>gi|319893056|ref|YP_004149931.1| ATP synthase alpha chain [Staphylococcus pseudintermedius HKU10-03]
 gi|317162752|gb|ADV06295.1| ATP synthase alpha chain [Staphylococcus pseudintermedius HKU10-03]
 gi|323463889|gb|ADX76042.1| ATP synthase F1, alpha subunit [Staphylococcus pseudintermedius
           ED99]
          Length = 503

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 112/424 (26%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      V  L+  V  G+ +         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVIQIGDGIALVHGLND-VMAGELLEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G  +EI  GD V   GR   +       GRV+N+LG+PIDG   L    
Sbjct: 66  LEETNVGVVILGPYDEIKEGDEVKRTGRIMEVPVGEELIGRVVNSLGQPIDGQGPLNTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I  K    M R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPIEKKATGVMARKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   +  +AP   VT
Sbjct: 185 NQKDQDMICIYVAIGQKESTVRAAVEKLRQAGALDYTIVVSASAAQPAPMLYIAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  V     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPFVETQAGDISAYVPTNVISITDGQIFLQSDLFFSGIRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEATASKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|91786236|ref|YP_547188.1| F0F1 ATP synthase subunit alpha [Polaromonas sp. JS666]
 gi|123165489|sp|Q12GQ2|ATPA_POLSJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91695461|gb|ABE42290.1| ATP synthase F1 subcomplex alpha subunit [Polaromonas sp. JS666]
          Length = 517

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 101/450 (22%), Positives = 190/450 (42%), Gaps = 29/450 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLTVSADIRNQGTVVSVTDGIVRIHGLSD-VMQGEMLEFPATA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
             +   G  + +  D V    +G  E I+ GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGTPTYGLALNLERDSVGSVILGEYEHIAEGDTVKCTGRILEVPVGPELLGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARKSVDQPLQTGLKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIINQKGKGVSCVYVAIGQKASSIKNVVRSLEQAGAMEYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER     ++              G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNEKYVEDFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKNLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +D    K + +   + + LKQ+     S
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQAQYSPLS 445


>gi|51536330|dbj|BAD38497.1| ATP synthase F0 subunit 1 [Oryza sativa Japonica Group]
          Length = 509

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 175/442 (39%), Gaps = 28/442 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGIPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIDRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +       +  I  +V SI DG I L   L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGGVSAYIPTNVISITDGQICLETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAKFGSDLDAT 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               +++   + +  KQ   + 
Sbjct: 417 TQALLNRGARLTEVPKQPQYEP 438


>gi|321260106|ref|XP_003194773.1| ATP synthase alpha chain, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317461245|gb|ADV22986.1| ATP synthase alpha chain, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 540

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 105/429 (24%), Positives = 184/429 (42%), Gaps = 22/429 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + +I      V  L + V   + V     +S   G  + +  D V +   G   
Sbjct: 56  VQETGRVLTIGDGIARVYGL-RNVQAEEMVEF---SSGVRGMCLNLEADNVGVTIFGNDR 111

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GD V   G+   +       GRV++ALG PIDG   + K     +   K P  + R
Sbjct: 112 LIKEGDTVKRTGQIVDVPVGPGLLGRVVDALGNPIDGKGPI-KAAGRTKAQLKAPGILPR 170

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----- 188
           + V +  +TG++ +D   P+  GQR  +      GK      T+L+    +D  D     
Sbjct: 171 RSVHEPMQTGLKSVDSLVPIGRGQRELIIGDRQTGKSAVAIDTILNQKKWNDGADESKKL 230

Query: 189 KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   VG++   V + ++     D +K S++V AT+ E+  L+ +AP +   + E+F  
Sbjct: 231 YCVYVAVGQKRSTVAQLVQTLEQNDAMKYSIIVAATASEAAPLQYLAPFSGCAMGEWFRD 290

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG-- 305
            G + L+I D +++ A + R+++      P    YP  VF    RLLER      + G  
Sbjct: 291 NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNADYGAG 350

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A 
Sbjct: 351 SLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFKGVRPAINVGLSVSRVGSAAQ 410

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   K +  SL   + ++ E   +     +   +D      +++   + + LKQ      
Sbjct: 411 TKLMKSVAGSLKLYLAQYRE---VAAFAQFGSDLDASTRYLLNRGARLTELLKQPQYSPM 467

Query: 426 SEDVFQEIT 434
             +V   + 
Sbjct: 468 PTEVMAPLI 476


>gi|148677504|gb|EDL09451.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_h [Mus musculus]
          Length = 506

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 101/418 (24%), Positives = 179/418 (42%), Gaps = 22/418 (5%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
            LV +    SS       V  L + V   + V     +S   G  + +  D V +   G 
Sbjct: 19  GLVSKNALGSSFVDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGN 74

Query: 78  GEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + I  GD+V   G    +       GRV++ALG  IDG   +G       +  K P  +
Sbjct: 75  DKLIKEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGII 133

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD--- 188
            R  V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D   
Sbjct: 134 PRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKK 193

Query: 189 --KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
               I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF
Sbjct: 194 KLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
              G + L+I D +++ A + R+++      P    YP  VF    RLLER         
Sbjct: 254 RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFG 313

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   
Sbjct: 314 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA 373

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           A +   K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 374 AQTRAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 428


>gi|148266220|ref|YP_001232926.1| flagellar protein export ATPase FliI [Geobacter uraniireducens Rf4]
 gi|146399720|gb|ABQ28353.1| type III secretion system ATPase, FliI/YscN [Geobacter
           uraniireducens Rf4]
          Length = 443

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 155/431 (35%), Positives = 235/431 (54%), Gaps = 10/431 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-G 60
           + +L       E      +   G ++ +  +   +        +G         SD +  
Sbjct: 5   KIDLSRFMHAVEAVKP--IRLHGKVTQVVGLV--IEGFCPETAVGTLCEINSHGSDPIPA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +   + P+G    + LG L+     +  +       GRVI+ LG PID   ++
Sbjct: 61  EVVGFRDNKTLLMPLGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGSPIDDRGAI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+    I +     M R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL 
Sbjct: 121 ITGE-EYPIYAMPVNPMKRRPIREPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLG 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +I+L+GERGRE+REFI +D   + LKKSVVVVATSD+ P++R      A
Sbjct: 180 MIARYTEADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIAEYF ++G  VLL++DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G
Sbjct: 240 TTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+IT + +VLV+GD+ N+P++D++RSILDGHI+L+R LA    YPP+D L S S
Sbjct: 300 NF--HGGSITGLYTVLVEGDDFNEPVSDAMRSILDGHIILSRELAARNIYPPIDVLNSAS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + +KL      ++  + +  D+  IG Y+PG +  +D A+ ++  +  +LK
Sbjct: 358 RVMMDVTSREHQKLAGGFKGVLATYRQAEDLINIGAYKPGSNPKIDYAIAKIEHMNSYLK 417

Query: 419 QSPSDLSSEDV 429
           Q  +D    D 
Sbjct: 418 QDVNDGVEVDA 428


>gi|326516490|dbj|BAJ92400.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 548

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 103/429 (24%), Positives = 179/429 (41%), Gaps = 22/429 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +I      V  L + V   + V      S   G  + +  D V +   G    I
Sbjct: 66  ETGRVLTIGDGIARVYGL-RNVQAEEMVEFA---SGVQGMALNLEADNVGVTIFGPDRSI 121

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V   G    +       GRV++ALG PIDG   +   +      SK P  + R+ 
Sbjct: 122 KEGDSVKRTGTIVDVPVGMELLGRVVDALGNPIDGKGPINASE-RRRAQSKAPGILPRRS 180

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TG++ +D   P+  GQR  +      GK      T+L+    ++  D       
Sbjct: 181 VHEPMLTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDTILNQKRFNNSTDESKKLYC 240

Query: 191 IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + ++    ++  K S+VV AT+ +   L+ +AP +   + EYF   G
Sbjct: 241 VYVAVGQKRSTVAQLVQTLEENDAMKYSIVVAATASDPAPLQYLAPFSGAAMGEYFRDNG 300

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L++ D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 301 KHALIVFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNESLGAGSL 360

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 361 TALPVIETQGGDVSAYIPTNVISITDGQIFLESELFFKGVRPAINVGLSVSRVGSAAQTK 420

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             K +  SL   + ++ E   +     +   +D      + +   + + LKQ      S 
Sbjct: 421 VMKAVAGSLKLYLAQYRE---VAAFASFGSDLDQATRYLLARGQRLTELLKQRQYSPIST 477

Query: 428 DVFQEITKK 436
           +V   +   
Sbjct: 478 EVQVPLIMA 486


>gi|322379228|ref|ZP_08053619.1| ATP synthase F1, subunit alpha [Helicobacter suis HS1]
 gi|321148368|gb|EFX42877.1| ATP synthase F1, subunit alpha [Helicobacter suis HS1]
          Length = 503

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 186/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           ++   E ++ + ++  ++      + Q G + +       V  L   +   + V     +
Sbjct: 2   LKLKAEEISAIIKERIESFAPDINITQVGRVIAYADGVAKVYGLKDVMSY-EVVEFDTGD 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G    +    V +  +G G  I  G  V    +  ++       GRVIN LG+PID
Sbjct: 61  R---GLASNLEEGSVGVIVLGGGRNIKEGTSVKRTKQLMKVPVGDAVVGRVINTLGEPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  M+R+ V +  +TGI+VID   P+  GQR  +      GK
Sbjct: 118 GRGPIEANAFSF-VEQKAPGIMDRKSVHEPLQTGIKVIDALVPIGRGQRELIIGDKQTGK 176

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++  + D     I   +G++   V + +           SVV+ A +  SP ++
Sbjct: 177 TTVAIDAIINQKDQNVICIYVAIGQKESTVAQVVHKLEEYGAMEYSVVINAPASASPAMQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VTI E+F  +G + L++ D +++ A + REI+      P    +P  VF    
Sbjct: 237 YLAPYAGVTIGEHFRDQGRHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHS 296

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +KG  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 297 RLLERAAKMSDKKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYSGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 357 AINVGLSVSRVGGAAQIKGTKQVAGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 413

Query: 410 VPIIYDFLKQSP 421
              + + LKQ P
Sbjct: 414 GQRMVEVLKQPP 425


>gi|255523701|ref|ZP_05390667.1| ATPase FliI/YscN [Clostridium carboxidivorans P7]
 gi|296186704|ref|ZP_06855106.1| flagellar protein export ATPase FliI [Clostridium carboxidivorans
           P7]
 gi|255512570|gb|EET88844.1| ATPase FliI/YscN [Clostridium carboxidivorans P7]
 gi|296048741|gb|EFG88173.1| flagellar protein export ATPase FliI [Clostridium carboxidivorans
           P7]
          Length = 435

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 167/438 (38%), Positives = 252/438 (57%), Gaps = 14/438 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQV 62
           N   L +  E+   N     G +S +  +   V  +  +V  G+   ++  KN     +V
Sbjct: 5   NFNFLNKKLEETDFNYS--EGIVSKVIGLTIEVEGIKSFV--GEVCTIYNEKNHPVTCEV 60

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +      V + P+G    I+ G  V   G    +  S    G+V++ LG+P++G + +  
Sbjct: 61  VGFREKNVILMPLGELIGIAPGCRVVPEGMPLSVKCSDELFGKVLDGLGQPLNG-EEIDI 119

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G +   + ++ P  + R+R+++   TGIR ID FT    GQRIG+FAGSG+GKST L M 
Sbjct: 120 GTV-YPLDTEPPDPLKRRRIKEVIPTGIRAIDGFTTCGEGQRIGIFAGSGVGKSTTLGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I+L+GERGREV++FI +D   + +KKS++V ATSD+  ++R     TA  
Sbjct: 179 ARYAEADVNVIALIGERGREVKDFIEKDLGEEGMKKSIIVCATSDKPALVRLKGAFTATA 238

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G+ V+L++DS+TRFA + REI    GE P  +GY  SVF+ LPRL+ER G S
Sbjct: 239 IAEYFRDRGNKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVFAMLPRLMERAGMS 298

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +K  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D L+S+SRL
Sbjct: 299 DK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAAKNHYPAIDILSSISRL 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    + KK  S    L+  ++ + D+  IG Y  G +  +D ++     I  +LKQ 
Sbjct: 357 MSEVAEDEHKKAASFARDLLATYKNSEDLINIGAYVKGSNEKVDTSIQYYDDIIGYLKQG 416

Query: 421 PSDLSSEDVFQEITKKLQ 438
             + +    F E    L+
Sbjct: 417 MKEHT---TFSESVLSLE 431


>gi|34539461|gb|AAQ74614.1| F1-ATPase alpha subunit [Thysanotus thyrsoideus]
          Length = 418

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTEESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERASKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|59712456|ref|YP_205232.1| flagellum-specific ATP synthase [Vibrio fischeri ES114]
 gi|197335284|ref|YP_002156675.1| flagellar protein export ATPase FliI [Vibrio fischeri MJ11]
 gi|59480557|gb|AAW86344.1| flagellum-specific ATP synthase FliI [Vibrio fischeri ES114]
 gi|197316774|gb|ACH66221.1| flagellar protein export ATPase FliI [Vibrio fischeri MJ11]
          Length = 439

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 148/439 (33%), Positives = 240/439 (54%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E L+Q          +  G +  +  +    T       +G   + +  N +   
Sbjct: 1   MLPLSERLSQYKTTGLTTRAIASGKLVRVVGLTLEATG--CRAPIGSSCLVETVNGEIEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +++ P      +  G  V        I       GRV++ +G PIDG   L
Sbjct: 59  EVVGFSGENLFLMPSEQVSGVLPGAKVTPIADGSGIPVGMELLGRVVDGVGNPIDGLGEL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +    S+    ++R+ + +    G++ I+    +  GQR+G+FAGSG+GKS  L 
Sbjct: 119 Y-TEHTASFTSEPINPLSRKPISEPLDVGLKAINGLLTVGKGQRLGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG +  ++SVVV A +D S ++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGPEGRQRSVVVAAPADASALMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGNENQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +    +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P + ++L+
Sbjct: 358 RVMPQITDEEHMLMSKAVRQVLSTCRKNQDLVSIGAYKPGTDPAIDQAFTLKPRLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   +    D+ + + K L
Sbjct: 418 QRMKESVPYDMCKNMLKML 436


>gi|113969628|ref|YP_733421.1| flagellum-specific ATP synthase [Shewanella sp. MR-4]
 gi|114046858|ref|YP_737408.1| flagellum-specific ATP synthase [Shewanella sp. MR-7]
 gi|113884312|gb|ABI38364.1| flagellar protein export ATPase FliI [Shewanella sp. MR-4]
 gi|113888300|gb|ABI42351.1| flagellar protein export ATPase FliI [Shewanella sp. MR-7]
          Length = 445

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 154/435 (35%), Positives = 238/435 (54%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  L    +       +  G +  +  +    +       +G     +    + + +V+ 
Sbjct: 9   LNKLNHCIDKVPPFRAIASGQLVRVVGLTLEASG--CRAPVGSLCSIETMAGELIAEVVG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + +++Y+ P+     +  G  V   G    +S      GRV++  G P+DG  +L   +
Sbjct: 67  FDDELLYLMPIEELRGVLPGARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDGLGALS-TE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 S     ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QQAPRHSNAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG+    +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGP 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  + +  +      +++ +D+  IG Y  G D  +D A+   P +  FL+Q+  
Sbjct: 366 MVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAFLRQTMR 425

Query: 423 DLSSEDVFQEITKKL 437
           D  S    Q +  +L
Sbjct: 426 DAFSFADSQVMLGQL 440


>gi|224005467|ref|XP_002291694.1| mitochondrial ATPase, inner membrane [Thalassiosira pseudonana
           CCMP1335]
 gi|220972213|gb|EED90545.1| mitochondrial ATPase, inner membrane [Thalassiosira pseudonana
           CCMP1335]
          Length = 542

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 171/417 (41%), Gaps = 16/417 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
             + G + S+      V  L+  V  G+ VV         G  + +  D V +   G   
Sbjct: 62  YAETGSVISVGDGIARVYGLA-NVQAGEMVVFACG---LRGMALNLEEDNVGVVIFGDDR 117

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           +I  GD V   G    +       GRV++ +G+PIDG  SL     S     K P  + R
Sbjct: 118 DILEGDTVKRTGAIVDVPVGPELLGRVVDGIGQPIDGGASLDNCKRSRA-EVKAPGIIPR 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISL 194
           + V +   TG++ +D   P+  GQR  +      GK+ +      +    K     I   
Sbjct: 177 ESVSEPMLTGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKKDPLACIYVG 236

Query: 195 VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VG++   + + +            ++V AT+ +S  L+ +AP T   + EYF   G + +
Sbjct: 237 VGQKRSTIAQLVGQLDDKKAMDNCIIVAATASDSAPLQFLAPYTGAAMGEYFRDNGKHAV 296

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS--EKEKGNITAVI 311
           +  D +++ A + R+++      P    YP  VF    RLLER          G++TA+ 
Sbjct: 297 IFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMHRNTGGGSLTALP 356

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V SI DG I L   L  +G+ P +    SVSR+   A     K 
Sbjct: 357 VIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSAAQYKATKS 416

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  ++   + ++ E   +     +   +D    + +++   +Y+ LKQ   +    +
Sbjct: 417 VAGTMKLELAQYRE---VAAFAKFGSDLDAATQQQLNRGVRLYELLKQGQYEPYEPE 470


>gi|261856901|ref|YP_003264184.1| ATP synthase F1 subunit alpha [Halothiobacillus neapolitanus c2]
 gi|261837370|gb|ACX97137.1| ATP synthase F1, alpha subunit [Halothiobacillus neapolitanus c2]
          Length = 512

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 99/445 (22%), Positives = 180/445 (40%), Gaps = 30/445 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   +N          G I S++     +  L+  V LG+ +   G     
Sbjct: 3   NPSEISSLIKQRIENFDQSADAQTVGTIVSVSDGILRIHGLND-VMLGEMIELPGGG--- 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  + +  GD V    R   +       GRV+N LG+PIDG  
Sbjct: 59  FAVAMNLERDSVGAIVLGGYDHLREGDQVKCTQRILEVPVGKELLGRVVNTLGQPIDGKG 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    ++  I    P  + RQ V++   TGI+ +D   P+  GQR  +      GK+ +
Sbjct: 119 DIN-AKITAPIEKIAPGVIERQSVDQPLLTGIKALDAMVPIGRGQRELIIGDRQTGKTAV 177

Query: 178 LSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +        +   +G++   +   +         + ++VV AT+ +   ++ +A
Sbjct: 178 AIDTIINQKGKGVFCVYVAIGQKASSIANVVRKLEEYGALEYTIVVAATASDPAAMQYLA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    RLL
Sbjct: 238 AYAGCTMGEYFRDRGMDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLL 297

Query: 295 ERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER                   + G++TA+  +   G + +  +  +V SI DG I L   
Sbjct: 298 ERASRVNADYVAEFTKGEVTGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETD 357

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++P  SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 358 LFNSGIRPAINPGISVSRVGGAAQTKAIKKLAGGIRTDLAQYRE---LAAFSQFASDLDE 414

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
           +  K + +   + + +KQ      S
Sbjct: 415 VTRKQLERGKRVTELMKQKQFKPLS 439


>gi|256070850|ref|XP_002571755.1| ATP synthase alpha subunit mitochondrial [Schistosoma mansoni]
 gi|238656902|emb|CAZ27985.1| ATP synthase alpha subunit mitochondrial, putative [Schistosoma
           mansoni]
          Length = 547

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 100/425 (23%), Positives = 181/425 (42%), Gaps = 23/425 (5%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           L +    NL  + G + SI      V  L + +   + V     +S   G  + +  D V
Sbjct: 52  LGQTLQTNLE-ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLEPDNV 106

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            +   G  + I  GD+V   G    +       GRV++ALG PIDG  ++        + 
Sbjct: 107 GVVVFGNDKLIREGDIVKRAGAIVDVPVGVELLGRVVDALGNPIDGAGAIN-TKTRQRVG 165

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARS 184
            K P  + R  V +  +TGI+ +D   P+  GQR  +      GK      T+++    +
Sbjct: 166 VKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAVDTIINQKRFN 225

Query: 185 DCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTA 238
           D  D       I   +G++   V + ++     D +K +++V AT+ ++  L+ +AP   
Sbjct: 226 DAADEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAIKYTIIVSATASDAAPLQYLAPYAG 285

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER  
Sbjct: 286 CAMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAA 345

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
                   G++TA+  +     + +  I  +V SI DG I L   L  +   P ++   S
Sbjct: 346 KMNDSYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFHKSIRPAINVGLS 405

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+   A +   K++   +   + ++ E   +     +   +D      +++   + + 
Sbjct: 406 VSRVGSAAQTKAMKQVAGRMKLELAQYRE---VAAFAQFGSDLDASTQSLLNRGVRLTEL 462

Query: 417 LKQSP 421
           LKQ+ 
Sbjct: 463 LKQNQ 467


>gi|71988063|ref|NP_001021526.1| hypothetical protein H28O16.1 [Caenorhabditis elegans]
 gi|75029335|sp|Q9XXK1|ATPA_CAEEL RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|3878073|emb|CAA19429.1| C. elegans protein H28O16.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 538

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +++D V +   G  + I
Sbjct: 55  ETGKVLSIGDGIARVYGL-KNIQAEEMVEF---DSGIKGMAMNLDVDNVGVVVFGNDKVI 110

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +     S  +  K P  + R  
Sbjct: 111 REGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSR-VEVKAPGIIPRLS 169

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TG++ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 170 VREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFC 229

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + ++          ++VV AT+ ++  L+ +AP +   + E+F   G
Sbjct: 230 IYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNG 289

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 290 KHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSL 349

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 350 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 409

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 410 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQ 460


>gi|114216210|gb|ABI54716.1| ATPase alpha subunit [Lycopodium clavatum var. clavatum]
          Length = 408

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 169/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD+V
Sbjct: 2   SVGDGIARVYGLNK-IQAGELVEFA---SGVKGMALNLENENVGIVIFGSDTAIKEGDIV 57

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALNAVE-RRRVEVKAPGIIARKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVIISLV 195
           TG++ +D   P+  GQR  +      GK      T+L+    +            +   +
Sbjct: 117 TGLKAVDSPVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINAQGTSDSEKLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++        + SV+V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVKILEEAGALEYSVIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ + + R+++      P    +P  VF    R  ER          G++TA+  
Sbjct: 237 IYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYPHSRSSERAAKMSDRTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATRYLLNRGARLTEVLKQPQ 402


>gi|319939417|ref|ZP_08013777.1| ATP synthase subunit alpha [Streptococcus anginosus 1_2_62CV]
 gi|319811403|gb|EFW07698.1| ATP synthase subunit alpha [Streptococcus anginosus 1_2_62CV]
          Length = 501

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 105/434 (24%), Positives = 186/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L   +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDNAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDALIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -KTDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYSGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +  S +
Sbjct: 418 EVLKQPVHEPLSVE 431


>gi|260437519|ref|ZP_05791335.1| ATP synthase F1, alpha subunit [Butyrivibrio crossotus DSM 2876]
 gi|292810152|gb|EFF69357.1| ATP synthase F1, alpha subunit [Butyrivibrio crossotus DSM 2876]
          Length = 501

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 178/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++          V   G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQIMRYKTELDVSNVGTVIQVADGIARIHGL-ENAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G    I+ GD V   GR   +       GRV+N+LG+PID
Sbjct: 58  -EVYGMVLNLEEDNVGAVLLGTSRNINEGDTVKTTGRVVEVPVGDALTGRVVNSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D   +I       ++R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-TTDKYRQIERVASGVISRKSVDTPLQTGIKAIDTMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   ++          + VV +T+ E   L+
Sbjct: 176 TAIAIDTIINQKGQGVHCIYVAIGQKASTVATIVQTLTEYGAMDYTTVVASTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   I E +  +G++VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGCAIGEEWMERGEDVLVVYDDLSKHAAAYRTLSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERAAKLSDELGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+ + +   + ++ E   +     +   +D    + + Q
Sbjct: 356 AVNAGLSVSRVGGAAQIKAIKKIAAPIRVDLAQYRE---LAAFAQFGSELDTDTKEKLAQ 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GERLKEVLKQPQ 424


>gi|294616247|ref|ZP_06696040.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1636]
 gi|291590761|gb|EFF22477.1| ATP synthase F1, alpha subunit [Enterococcus faecium E1636]
          Length = 518

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 172/421 (40%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIENYQNVLSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 66  LESNDVGIIILGDFESIREGDKVKRTGKIMEVPVGEALIGRVVNPLGQPIDGLGEIV-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 KARPVEAMTPGVMQRKSVNEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKDSTVRTQVETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDDLGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|157826259|ref|YP_001493979.1| F0F1 ATP synthase subunit alpha [Rickettsia akari str. Hartford]
 gi|166201673|sp|A8GPZ6|ATPA_RICAH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157800217|gb|ABV75471.1| F0F1 ATP synthase subunit alpha [Rickettsia akari str. Hartford]
          Length = 512

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 108/435 (24%), Positives = 182/435 (41%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + S+      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------IKEVGQVISVGDGIAKIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVSAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIAMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          ++VV AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTIVVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 SLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKGN   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEEKGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 417

Query: 407 VHQVPIIYDFLKQSP 421
           +     + + LKQ+ 
Sbjct: 418 IDHGKRLVEILKQAQ 432


>gi|114403|sp|P22201|ATPAM_BRANA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|19554|emb|CAA39483.1| F1-ATPase alpha subunit (ATPA) [Brassica napus]
          Length = 507

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 178/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|15620371|gb|AAL03775.1| ATP synthase alpha chain [Rickettsia conorii str. Malish 7]
          Length = 533

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 185/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 35  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 84

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 85  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGKALLGRVVDALGNPIDGKGDI 144

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 145 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 203

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 204 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 263

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 264 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 323

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 324 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 383

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 384 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 440

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+       E+    I
Sbjct: 441 IDHGKRLVEILKQAQYHPFPVEEQIVSI 468


>gi|289620650|emb|CBI52781.1| unnamed protein product [Sordaria macrospora]
          Length = 551

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 101/415 (24%), Positives = 176/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 67  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 122

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRVI+ALG PIDG   +   +       K P  + RQ
Sbjct: 123 VKEGETVKRTGEIVDVPVGPELLGRVIDALGNPIDGKGPINCKEKRRA-QLKAPGILPRQ 181

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 182 SVNQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAILNQKRWNNGSDEDKKLY 241

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 242 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGACVGEWFRDS 301

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +T+ A + R+++      P    YP  VF    RLLER     K    G+
Sbjct: 302 GKHSLVIFDDLTKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKTHGGGS 361

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 362 MTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQL 421

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 422 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQKQ 473


>gi|225872679|ref|YP_002754136.1| ATP synthase F1, alpha subunit [Acidobacterium capsulatum ATCC
           51196]
 gi|254807668|sp|C1F3N8|ATPA_ACIC5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|225794049|gb|ACO34139.1| ATP synthase F1, alpha subunit [Acidobacterium capsulatum ATCC
           51196]
          Length = 534

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 179/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +   +Y   + V + G + S+      +  L +    G+ +          G  + 
Sbjct: 11  ALLKEQIANYDAKVRVDEVGTVISLGDGIARLHGLDK-CMAGEMLEFP---HGVYGMAMN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G   EI  GD V   G+   +       GRV+N+LG+PID    +   D
Sbjct: 67  LEEDQVGAVLLGDYTEIREGDQVKRTGQILSVPVGDAMIGRVVNSLGEPIDDKGPIAASD 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +    P  ++RQ V +   TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 127 -RFPVERLAPGVIDRQPVREPMMTGLKAIDSMIPIGRGQRELIIGDRQTGKTAVALDTII 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   ++          +VVVVA++ E   +  +AP  A  
Sbjct: 186 NSKGRDLICVYCAIGQKRSSVAGVVQTLAKHGALDYTVVVVASASEPAPMLYLAPYAATA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 MAEYFRDNGKHALIIYDDLSKHAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSSKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 306 SKEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGVRPAVNVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S+L   + ++   RD+     +   +D      +++   + + LK
Sbjct: 366 RVGFSAAIKAIKQVGSTLKLDLAQY---RDLAAFAQFGSDLDKATQNQLNRGQRLTELLK 422

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 423 QPQFQPLSAE 432


>gi|319638949|ref|ZP_07993707.1| ATP synthase subunit alpha [Neisseria mucosa C102]
 gi|317399853|gb|EFV80516.1| ATP synthase subunit alpha [Neisseria mucosa C102]
          Length = 515

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNTEVRTRGTVVSVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPIGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|312891281|ref|ZP_07750800.1| ATP synthase F1, alpha subunit [Mucilaginibacter paludis DSM 18603]
 gi|311296241|gb|EFQ73391.1| ATP synthase F1, alpha subunit [Mucilaginibacter paludis DSM 18603]
          Length = 524

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 172/448 (38%), Gaps = 36/448 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL+   S + + + G +  +      V  L++ V  G+ V          G V+ +  D 
Sbjct: 16  QLSGFKSASELEEVGTVLQVGDGIARVYGLTK-VQSGELVEFDNA---LQGIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  + +  GD V    +   I       GRV+N LG+PIDG   +      M +
Sbjct: 72  VGVVLLGASDGVKEGDTVKRTSKIASIKVGEGMLGRVVNTLGEPIDGKGPIAGITYEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF- 187
             K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+ +      +    
Sbjct: 132 ERKAPGVIYRQPVTEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTAVCIDTIINQKEF 191

Query: 188 ------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I   +G++   V   +     +     S++V A++ +   ++  AP     
Sbjct: 192 YEAGKPVYCIYVAIGQKNSTVANILRTLEENGAMPYSIIVAASAADPAPMQFFAPFAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E+F   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEFFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKI 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 NSVDSIAQDMNDLPESIKHIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +D
Sbjct: 372 NLFNAGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELE---AFSKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +     + LKQ      + +
Sbjct: 429 ASTKTVLDKGARNVEILKQGQFSPLTVE 456


>gi|255088599|ref|XP_002506222.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
 gi|226521493|gb|ACO67480.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
          Length = 561

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 109/438 (24%), Positives = 188/438 (42%), Gaps = 27/438 (6%)

Query: 4   NLETLAQLAED-----YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           + + L+ L E      YS   + + G + S+      V  L++ +  G+ V      S  
Sbjct: 55  SAQELSSLLEQRISGHYSALDIDEIGRVLSVGDGIARVYGLNK-IQAGEMVEFA---SGV 110

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V I   G    I+ GD+V   G    +       GRV++ LG+PIDG  
Sbjct: 111 KGMALNLENDNVGIVCFGSDTTINEGDIVKRTGAIVDVPVGRGMLGRVVDGLGQPIDGKG 170

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK--- 174
            LG       +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK   
Sbjct: 171 PLGDVTQQR-VEIKAPGIIVRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 229

Query: 175 --STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
              T+++    +D  D       +   VG++   V + ++          SV+V AT+ +
Sbjct: 230 AIDTIINQKGVNDQGDESKKLYCVYVAVGQKRSTVAQLVKVLQDKGALDYSVIVAATASD 289

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   IAEYF   G + L+I D +++ + + R+++      P    +P  V
Sbjct: 290 PAPLQFLAPYSGCAIAEYFRDNGMHSLIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDV 349

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      E   G++TA+  V   G + +  I  +V SI DG I L   L  
Sbjct: 350 FYLHSRLLERAAKMSDEVGAGSMTALPVVETQGGDVSAYIPTNVISITDGQIFLETELFF 409

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    
Sbjct: 410 KGIRPAINVGLSVSRVGSAAQMKAMKQVSGSLKLELAQYRE---VAAFAQFGSDLDAATQ 466

Query: 405 KAVHQVPIIYDFLKQSPS 422
             +++   + + LKQ   
Sbjct: 467 YLLNRGSRLTEVLKQGQF 484


>gi|206895959|ref|YP_002246686.1| flagellum-specific ATP synthase [Coprothermobacter proteolyticus
           DSM 5265]
 gi|206738576|gb|ACI17654.1| flagellum-specific ATP synthase [Coprothermobacter proteolyticus
           DSM 5265]
          Length = 438

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 161/424 (37%), Positives = 246/424 (58%), Gaps = 12/424 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L    G + +++    ++  L+    +G+   V++        +V+        + P+G
Sbjct: 17  DLFEVYGKVLNVSG--LSIEALTPASFVGELCSVNRFDGKPMFAEVVGFKEGKTLLMPIG 74

Query: 77  IGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + I    L+   GR   I  S    GRV+NA+G+P+D    +        +    P  
Sbjct: 75  DVQGIGPNSLIRAMGRPLWIKVSDGLVGRVVNAIGEPLDDKGPVYGEK--RSVYQDPPHP 132

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R+ + +  +T I+ ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +I LV
Sbjct: 133 LKRKIITEPLQTSIKAIDGLLTVGKGQRVGIFAGSGVGKSTLLGMIARNSSADVNVIILV 192

Query: 196 GERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVR+FIE+    +  K+SVVVVATSD+  +LR  A LT +TIAEYF  +G +VL+
Sbjct: 193 GERGREVRKFIEEDLTEEGAKRSVVVVATSDQPALLRVKAVLTGMTIAEYFRDQGKDVLV 252

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + RE+  + GE P  RGY  SVF+ LP++LER G S+K  G+ITA I+VL
Sbjct: 253 MMDSVTRLAMAQREVGLSIGEPPTTRGYTPSVFALLPKILERAGNSDK--GSITAFITVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ N+P+AD+VRSILDGHIVL+R+LA    YP +D L S+SR+ +   SA   KL +
Sbjct: 311 VEGDDMNEPVADAVRSILDGHIVLSRALAHRAHYPAIDVLQSISRVMNDVVSAKHLKLAN 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +  L+  + E  D+  IG Y+ G +  +D+A+  +  I  FL Q   +       ++  
Sbjct: 371 RMRELLAVYTEAEDLINIGAYQRGNNPKIDEALDYIDAINHFLLQQVKESY---TLEQTV 427

Query: 435 KKLQ 438
             ++
Sbjct: 428 SLME 431


>gi|261378157|ref|ZP_05982730.1| ATP synthase F1, alpha subunit [Neisseria cinerea ATCC 14685]
 gi|261379447|ref|ZP_05984020.1| ATP synthase F1, alpha subunit [Neisseria subflava NJ9703]
 gi|269145620|gb|EEZ72038.1| ATP synthase F1, alpha subunit [Neisseria cinerea ATCC 14685]
 gi|284797901|gb|EFC53248.1| ATP synthase F1, alpha subunit [Neisseria subflava NJ9703]
          Length = 515

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVVSVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPIGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|225075912|ref|ZP_03719111.1| hypothetical protein NEIFLAOT_00936 [Neisseria flavescens
           NRL30031/H210]
 gi|224952768|gb|EEG33977.1| hypothetical protein NEIFLAOT_00936 [Neisseria flavescens
           NRL30031/H210]
          Length = 515

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVVSVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPIGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|326802572|ref|YP_004320391.1| ATP synthase subunit alpha [Sphingobacterium sp. 21]
 gi|326553336|gb|ADZ81721.1| ATP synthase subunit alpha [Sphingobacterium sp. 21]
          Length = 524

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 105/451 (23%), Positives = 176/451 (39%), Gaps = 42/451 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ L      AE      + + G +  +      V  L++ V  G+ V  +       G
Sbjct: 13  LREQLSNFKSEAE------LEEVGTVLQVGDGIARVYGLTK-VQSGELVEFENG---LQG 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V +  +G  +EI  GD++    +   I+      GRV+N LG+PIDG   +
Sbjct: 63  IVLNLEEDNVGVVLLGSSDEIKEGDIIKRTNKIASINVGEGMLGRVVNTLGQPIDGKGPI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M I  K P  + RQ V +  +TGI+ ID   P+  GQR  V     +GK+ +  
Sbjct: 123 TGKTYEMPIERKAPGVIYRQPVNEPLQTGIKAIDAMIPIGRGQRELVIGDRQVGKTAVCI 182

Query: 180 MFARSDCF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
               +             I   VG++   V   +           ++VV A++ E   ++
Sbjct: 183 DTILNQKEFYDAGEPVYCIYVAVGQKNSTVANIVRTLEERGALAYTIVVSASASEPAPMQ 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP+    I E+F   G   L++ D +++ A + RE++      P    YP  VF    
Sbjct: 243 FYAPMAGAAIGEFFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHS 302

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 303 RLLERAAKINASDEIARNMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISI 362

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L  +L   G  P ++   SVSR+   A     KK+  +L     ++ E      
Sbjct: 363 TDGQIFLESNLFNAGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELE---A 419

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              +   +D      + +     + LKQ   
Sbjct: 420 FAKFGSDLDAATKGVLDKGVRNVEILKQGQF 450


>gi|163750547|ref|ZP_02157785.1| flagellum-specific ATP synthase [Shewanella benthica KT99]
 gi|161329702|gb|EDQ00691.1| flagellum-specific ATP synthase [Shewanella benthica KT99]
          Length = 446

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 154/435 (35%), Positives = 241/435 (55%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  + +  +     +    G +  +     T+  +     +G     +    D + +VI 
Sbjct: 9   LNKIRRQHDRVHPFVAEASGQLIRVVG--LTLEAIGCRAPIGSLCSIETLAGDMVAEVIG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + +++Y+ P+     +  G  V   G    ++      GRV++  G+P+D    L   D
Sbjct: 67  FDDELLYLMPIEELRGVLPGAKVTPLGEQTGLNVGLALLGRVLDGNGQPLDNLGRL-HTD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 +     + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QKAPRHAPTINPLARRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG+    +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADIIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGP 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHYPAIDIEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  + +  +  +   F++ +D+  IG Y  G D  +D A+   P +  FL+Q+ +
Sbjct: 366 MVISTEHLESMRRVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQTMT 425

Query: 423 DLSSEDVFQEITKKL 437
           +  S D  Q +  +L
Sbjct: 426 ESLSFDSSQLMLSQL 440


>gi|34539161|gb|AAQ74464.1| F1-ATPase alpha subunit [Acorus tatarinowii]
          Length = 416

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 173/413 (41%), Gaps = 22/413 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V          G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVDGLNE-IQAGEMVEFSNG---VQGIALNLENENVGIVIFGSDTAIKEGDLV 56

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDYE-RKRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +          L+           +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGNEQEKLYCVYVAIG 175

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++       L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSANQALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERASKRSDQTGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVC 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            SL   + ++ E   +     +   +D      +++   + + LKQ   +  +
Sbjct: 356 GSLKLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTEVLKQPQYEPLT 405


>gi|295706282|ref|YP_003599357.1| flagellum-specific ATP synthase [Bacillus megaterium DSM 319]
 gi|294803941|gb|ADF41007.1| flagellum-specific ATP synthase [Bacillus megaterium DSM 319]
          Length = 437

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 167/427 (39%), Positives = 249/427 (58%), Gaps = 12/427 (2%)

Query: 9   AQLA-EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRI 65
           AQL  E    +   + G +S +  +   +        +GD   +H  +  D +  +V+  
Sbjct: 4   AQLIHEIPRTSSFKRYGKVSRVVGMM--IESKGPRTSIGDVCFIHLSEQGDKIRAEVVGF 61

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           N + V + P      I  G LV    +  ++S      G+V+++LG P+DG +      L
Sbjct: 62  NGEHVVLMPYTSVRYIGPGCLVETTEKPLQVSVGKELIGQVLDSLGNPLDGSE--FSHYL 119

Query: 125 SMEI-MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +     P  + R  +E+  + G+R ID    +  GQRIG+FAGSG+GKSTLL M AR
Sbjct: 120 PFVLTDQDPPNPLERPPIEQPIEVGVRTIDSLLTVGQGQRIGIFAGSGVGKSTLLGMIAR 179

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D  +I+LVGERGREVREFI  D   + LK+SVVVVATSD+  +LR  A  TA +IA
Sbjct: 180 NTKADINVIALVGERGREVREFIERDLGEEGLKRSVVVVATSDQPALLRMKAAYTATSIA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF ++G +V++++DS+TR A + REI    GE P  +GY  SVF+ LPRLLER G +  
Sbjct: 240 EYFRNEGLSVMMMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFASLPRLLERTGTN-- 297

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+ITA  +VLVDGD+ N+PI+D+VR I+DGHIVL+R LA +G+YP ++ L SVSR+ +
Sbjct: 298 QHGSITAFYTVLVDGDDMNEPISDTVRGIIDGHIVLDRELANKGQYPAINVLKSVSRVMN 357

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S   ++    L  L+  +  + D+  IG Y+ G    +D+A++  P+I  FLKQ  +
Sbjct: 358 HIVSEQHREAAGKLRSLMATYANSEDLINIGAYKRGSSAYIDEAIYYHPVIDAFLKQKTN 417

Query: 423 DLSSEDV 429
           +  S + 
Sbjct: 418 EHPSFET 424


>gi|126728276|ref|ZP_01744092.1| F0F1 ATP synthase subunit alpha [Sagittula stellata E-37]
 gi|126711241|gb|EBA10291.1| F0F1 ATP synthase subunit alpha [Sagittula stellata E-37]
          Length = 511

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 101/446 (22%), Positives = 186/446 (41%), Gaps = 28/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   +  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQDAEVAEVGRVLSVGDGIARVHGL-DNIQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V I   G    I  GD V         P      GRV++ LG P+D
Sbjct: 59  --IMGMALNLETDNVGIVIFGSDRAIKEGDTVKRTNSIVDVPAGEGLLGRVLDGLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGAVQFEERRIA-DVKAPGIIPRKSVHEPMATGLKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 ST-----LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           +      +L+  + +D           +   +G++   V + ++       +  ++VV A
Sbjct: 176 TAVALDSILNQKSYNDAAKDDSEKLYCVYVAIGQKRSTVAQLVKKLEETGAIDYTIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   ++ +AP  A  +AEYF   G + L+I D +++ A S R+++      P    Y
Sbjct: 236 TASDPAPMQFLAPYAATAMAEYFRDNGKHALIIYDDLSKQAVSYRQMSLLLRRPPGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ G  ++TA+  +   G + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSAKLNEDNGAGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +D
Sbjct: 356 ELFYQGIRPAVNTGLSVSRVGSSAQTNSMKSVAGPIKLSLAQYRE---MAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
               + +++   + + +KQ      +
Sbjct: 413 AATQRLLNRGARLTELMKQPQYSPLT 438


>gi|75674724|ref|YP_317145.1| flagellum-specific ATP synthase [Nitrobacter winogradskyi Nb-255]
 gi|74419594|gb|ABA03793.1| ATPase FliI/YscN [Nitrobacter winogradskyi Nb-255]
          Length = 441

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 164/420 (39%), Positives = 254/420 (60%), Gaps = 5/420 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +  +  +   +      + +G  +V + G       +V+  N D   + P    
Sbjct: 14  VNIYGRVVGVRGLMVEIAGPIHAMSVGARIVIETGVGRTIPAEVVGFNGDNAVVMPFASL 73

Query: 79  EEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G   +       + P+A W GRV+NALG+PIDG   L +G   +   +  P A +
Sbjct: 74  DGVRRGCRALVANASDSVRPAAAWLGRVLNALGEPIDGKGPLPQGPTPVPYRNSPPSAHS 133

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           RQRV +     +R ++ F   C GQR+G+FAGSG+GKS LLSM AR+   D  +I L+GE
Sbjct: 134 RQRVGQPLDLKVRALNTFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADVSVIGLIGE 193

Query: 198 RGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV+EF++D LGD  L +SVVVVATSDE  ++R+ A    + IAE+F  +G +V+ ++
Sbjct: 194 RGREVQEFLQDDLGDEGLARSVVVVATSDEPALMRRQAAYLTLAIAEFFRDEGRDVMCMM 253

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI  ++GE P  +GY  +VF+ELPRLLER GP    KG IT + +VLVD
Sbjct: 254 DSVTRFAMAQREIGLSTGEPPTTKGYTPTVFTELPRLLERAGPGAD-KGTITGIFTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR   ++        ++  
Sbjct: 313 GDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINILKSVSRTMPRSADPAFLPDITCA 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435
             ++  + +  ++  +G YR G +  +D+A+   P++ DFL+Q+  +++S ED ++ + +
Sbjct: 373 RRMMATYSDMEELIRLGAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTSIEDGYRRLQQ 432


>gi|34539349|gb|AAQ74558.1| F1-ATPase alpha subunit [Lacandonia schismatica]
          Length = 416

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 174/410 (42%), Gaps = 21/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S++     V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVSDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK      TLL+    +          +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTLLNQKQMNSKGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 357 SFKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 403


>gi|172058683|ref|YP_001815143.1| ATP synthase F1, alpha subunit [Exiguobacterium sibiricum 255-15]
 gi|226739886|sp|B1YMR6|ATPA_EXIS2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|171991204|gb|ACB62126.1| ATP synthase F1, alpha subunit [Exiguobacterium sibiricum 255-15]
          Length = 502

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 175/426 (41%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           A++A+  S   V + G +  I         L   V  G+ V         +G    +   
Sbjct: 14  ARIAQYGSTMEVNETGTVIQIGDGIARAHGL-DNVMSGELVEFANG---TMGLAQNLEEG 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G   EI  GD V   GR    P      GRV+N LG PIDG   + + +    
Sbjct: 70  NVGIIILGDYLEIKEGDSVRRTGRIMEVPTGDALLGRVVNPLGMPIDGLGPI-ETEHYNP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K    M R+ V +  +TGI+ ID   P+  GQR  +      GK+++      +   
Sbjct: 129 IERKASGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSIAIDTIINQKE 188

Query: 188 DK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +    I   +G++   VR  +E    +     ++VV A + +   L  +AP   V + E+
Sbjct: 189 ENMICIYVAIGQKESTVRGVVETLRKNGALDYTIVVSAAASQPAPLLYLAPFAGVAMGEH 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER        
Sbjct: 249 FMDLGKHVLVIYDDLSKQAAAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAAKLNDGL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L   L   G  P ++P  SVSR+  
Sbjct: 309 GAGSLTALPFIETQASDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINPGLSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   +  + E         +   +D      +++     + LKQ  +
Sbjct: 369 SAQVKAMKKVAGTLRLDLASYRELE---AFSQFGSDLDKATQSKLNRGERTVEVLKQDLN 425

Query: 423 DLSSED 428
              + D
Sbjct: 426 QPLTVD 431


>gi|329578106|gb|EGG59518.1| ATP synthase F1, alpha subunit [Enterococcus faecalis TX1467]
          Length = 518

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 107/421 (25%), Positives = 176/421 (41%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y + L V+  G ++ +         L +    G+ V     +    G    
Sbjct: 10  ALIKEQIENYQQQLAVEEVGTVTYVGDGIARAHGL-ENAMSGELVEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LETNDVGIIILGDFETIREGDKVQRTGKIMEVPVGEALIGRVVNPLGQPLDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +  P  M RQ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 KTRPVEATAPGVMQRQSVAEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E       L  ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVRNQVETLRKFGALDYTIVVTAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  V     + +  ++ +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDELGGGSMTALPFVETQAGDISACVSTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|94971360|ref|YP_593408.1| F0F1 ATP synthase subunit alpha [Candidatus Koribacter versatilis
           Ellin345]
 gi|118573471|sp|Q1IIG6|ATPA_ACIBL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|94553410|gb|ABF43334.1| ATP synthase F1 subcomplex alpha subunit [Candidatus Koribacter
           versatilis Ellin345]
          Length = 512

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 178/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + +    E+Y   + V + G + SI      V  + + V  G+ +          G  + 
Sbjct: 11  KLIRSQIENYETKIAVDEVGTVMSIGDGIARVYGIDK-VMAGELLAFP---HGVAGIAMN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V    +G    I  GD V    R   +       GRV+NALG+PID    +    
Sbjct: 67  LDEDQVGAVLLGEYTAIKEGDEVKRTKRIMSVPVGEAMIGRVVNALGQPIDDKGPIVTDK 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +    P  ++RQ V +   TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 127 FN-PVERIAPGVIDRQPVREPMATGLKAIDAMIPVGRGQRELIIGDRQTGKTAVALDTII 185

Query: 184 SDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + ++    +     S+VVVA++ +   ++ +AP +   
Sbjct: 186 NSKGKNLICVYVAIGQKRSSVAQVVKMLEDNGAMEYSIVVVASASDPAPMQYIAPYSGTA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF   G + L I D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 246 IAEYFRDSGRHALCIYDDLSKQAAAYREISLLLRRPPGREAYPGDVFYLHSRLLERSSKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 306 SDKLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIYLETDLFNSGVRPAVNVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ +SL   + ++ E   +     +   +D      +++   + + LK
Sbjct: 366 RVGFSAAIKAMKQVGASLKLELAQYRE---LAAFSQFGSDLDKATQAQLNRGQRLVEILK 422

Query: 419 QSPSDL 424
           Q     
Sbjct: 423 QDQFQP 428


>gi|172057885|ref|YP_001814345.1| FliI/YscN family ATPase [Exiguobacterium sibiricum 255-15]
 gi|171990406|gb|ACB61328.1| ATPase, FliI/YscN family [Exiguobacterium sibiricum 255-15]
          Length = 437

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 162/442 (36%), Positives = 253/442 (57%), Gaps = 9/442 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M K  +  A + +   + LV   G +  +  +       +  V +G+  + +    D + 
Sbjct: 1   MYKLKQLQAAIRDVRREELVEHSGKVVQVIGLMIESRGPT-AVAIGERCLIRIHRGDEIE 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+      V + P G    I+ G +V   G+   +       G V++ LG+ +DG   
Sbjct: 60  AEVVGFREGHVLLMPYGETTAIAPGSIVIATGKPLHVPVGDDLIGTVLDGLGRSLDGKS- 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  I+ K P  ++R R+++   TGIR ID    +  GQR+G+FAGSG+GKSTLL
Sbjct: 119 -LAHLRTTSIVRKPPSPLDRPRIDEVLSTGIRAIDGLLTVGQGQRVGLFAGSGVGKSTLL 177

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A+    D  +I+L+GERGREV+EFIE +   + + +S++VVATSD+ P++R     T
Sbjct: 178 GMIAKRSMADINVIALIGERGREVKEFIEAELGEEGMSRSIIVVATSDQPPLVRLKGAYT 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G NV+L++DS+TRFA + REI   +GE P ++GY  SVF+ LP+LLER 
Sbjct: 238 ATAIAEYFRDQGKNVVLMMDSVTRFAMAQREIGLATGEPPASKGYTPSVFALLPQLLERS 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G     +G+ITA  +VLVDGD+ N+PIAD+VR ILDGH VL+R+LA +G+YP +  L S+
Sbjct: 298 GK--TTEGSITAFYTVLVDGDDMNEPIADAVRGILDGHFVLDRNLANKGQYPAIHILRSI 355

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+ ++  S + K    +   L+  + +  D+  IG Y+ G +  +D+AV + P +  FL
Sbjct: 356 SRVMNQITSTEHKDSAITFRQLLSTYLDAEDLINIGAYKSGTNPDIDRAVEKYPELIGFL 415

Query: 418 KQSPSDLS-SEDVFQEITKKLQ 438
           KQ   + S  ED    +   ++
Sbjct: 416 KQRVEEKSHFEDGMSRLISTIR 437


>gi|238917849|ref|YP_002931366.1| ATP synthase [Eubacterium eligens ATCC 27750]
 gi|238873209|gb|ACR72919.1| ATP synthase [Eubacterium eligens ATCC 27750]
          Length = 502

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 173/423 (40%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + YS  L V   G +  +      +  L +    G+ +   G   +  G V+ 
Sbjct: 10  SVIKEQIKRYSTELEVSDVGTVIQVADGIARIHGLEK-AMQGELLEFPG---EVYGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    ++ GD V   GR   +       GRV+NALG+PIDG   +   D
Sbjct: 66  LEEDNVGAVLLGDSRNVNEGDTVKTTGRVVEVPVGDALTGRVVNALGQPIDGKGPIV-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I       + R+ V    +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 KYRKIERVASGVITRKSVSVPLQTGIKAIDAMVPIGRGQRELIIGDRQTGKTAIAIDTII 184

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++          + VV +T+ E   L+ +AP +   
Sbjct: 185 NQKGQGVHCIYVAIGQKASTVASIVKTLEEYGAMAYTTVVASTASELAPLQYIAPYSGCA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +   G +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IGEEWMENGGDVLVVYDDLSKHAAAYRTLSLLLKRAPGREAYPGDVFYLHSRLLERAARM 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   +   G  P ++   SVS
Sbjct: 305 SDEYGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+ + +   + ++ E   +     +   +D    + + Q   I + LK
Sbjct: 365 RVGGSAQIKAIKKIAAPIRTELAQYRE---LASFSQFGSELDADTKEKLAQGERIREMLK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QPQ 424


>gi|302685682|ref|XP_003032521.1| hypothetical protein SCHCODRAFT_75760 [Schizophyllum commune H4-8]
 gi|300106215|gb|EFI97618.1| hypothetical protein SCHCODRAFT_75760 [Schizophyllum commune H4-8]
          Length = 528

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 180/424 (42%), Gaps = 22/424 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L + V   + V     +S   G  + ++ D V +   G   
Sbjct: 43  VEETGRVLSVGDGISRVWGL-KNVQAEEMVEF---SSGIRGMCLNLDADHVGVSIFGSDR 98

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GD V   G+   +       GRV++ALG P+DG   +   +       K P  + R
Sbjct: 99  LIKEGDTVKRTGQIVDVPVGPKLLGRVVDALGNPVDGKGPIEAAE-RRRASVKAPGILPR 157

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----- 188
           + V +   TGI+ ID   P+  GQR  +      GK      T+L+    +D  D     
Sbjct: 158 RSVNQPMMTGIKPIDAMVPIGRGQRELIIGDRQTGKTAVAIDTILNQKRWNDGKDESQKL 217

Query: 189 KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   VG++   V + ++    ++  K +++V AT+ E+  L+ +AP +   + E+F  
Sbjct: 218 YCVYVAVGQKRSTVAQLVKTLEENDAMKYTIIVAATASEAAPLQYLAPFSGCAMGEWFRD 277

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KG 305
            G + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G
Sbjct: 278 NGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDKFGGG 337

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L   G  P ++   SVSR+   A 
Sbjct: 338 SLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFRGVRPAINVGLSVSRVGSAAQ 397

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   KK   SL   + ++ E   +     +   +D      + +   + + LKQ      
Sbjct: 398 TKIMKKFAGSLKLYLAQYRE---VAAFAQFGSDLDASTRFLLSRGARLTELLKQGQYQPL 454

Query: 426 SEDV 429
             ++
Sbjct: 455 PTEI 458


>gi|326791540|ref|YP_004309361.1| ATPase, FliI/YscN family [Clostridium lentocellum DSM 5427]
 gi|326542304|gb|ADZ84163.1| ATPase, FliI/YscN family [Clostridium lentocellum DSM 5427]
          Length = 433

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 161/435 (37%), Positives = 245/435 (56%), Gaps = 13/435 (2%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRI 65
             +  +     L    G ++ +     ++  L     +GD    Q +    L   +V+  
Sbjct: 4   FKRYEQATKSQLWTYKGRVTRVVG--MSIETLGPIANIGDICYIQPRGKKELVTAEVVGF 61

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             + + + P+G  E I  G  V  +G +  +       G+V++   KPI+GD+       
Sbjct: 62  KDEYLLLMPLGNLEGIGPGCEVLAYGDKLSVKVDESLLGKVVDWRAKPINGDE--LHCRY 119

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I +  P  + R R+    + G+R ID    +  GQRIG+FAGSG+GKSTL+ M AR+
Sbjct: 120 QVPIDNTAPNPLTRNRITIPLQLGVRAIDGMLTVGKGQRIGIFAGSGVGKSTLMGMIARN 179

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  II+L+GERGREVREFI  D   + LK+S+VVVATSD+  ++R  A +TA  +AE
Sbjct: 180 ALSDINIIALIGERGREVREFIENDLQAEGLKRSIVVVATSDQPALMRLKAAMTATALAE 239

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           +F ++G +VLL++DS+TRF+ + REI    GE PV+RGY  SVF+++P+LLER G S+K 
Sbjct: 240 HFRAQGKDVLLMMDSLTRFSMAQREIGLAIGEPPVSRGYTPSVFAQMPKLLERAGNSDK- 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT + +VLVDGD+ N+PI D+ R ILDGHIVL+R LA +G YP +D LAS+SR+   
Sbjct: 299 -GSITGMYTVLVDGDDFNEPITDTARGILDGHIVLSRKLANKGHYPAIDVLASISRVMSN 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S   K     +   +  ++E  D+  +G Y  G    +D A+ ++  I +FL QS  +
Sbjct: 358 IVSDQHKTYAREIKKHMAVYKEAEDLINVGAYNKGSSEEIDAAIDKMKFINEFLCQSVGE 417

Query: 424 LSSEDVFQEITKKLQ 438
                 F+     +Q
Sbjct: 418 KVE---FENTLHHMQ 429


>gi|258544333|ref|ZP_05704567.1| F-ATPase subunit alpha [Cardiobacterium hominis ATCC 15826]
 gi|258520413|gb|EEV89272.1| F-ATPase subunit alpha [Cardiobacterium hominis ATCC 15826]
          Length = 513

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 107/444 (24%), Positives = 189/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++   ++   +          G I S+      V  L +   LG+ +   G  
Sbjct: 1   MQLNPAEISGFIQEKIADYDNKVESKAEGTIISLYDGVARVQGL-RQAMLGEMIAFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V +  +G  + +S GD V   GR   +       GRV+NALG+PID
Sbjct: 59  --VYGLALNLERDSVGVVILGEYDHLSEGDKVTCTGRILEVPVGRELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGDIKTSE-SSPIEKIAPGVIERQSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +  D   K I   +G++   +   +      D LK +++V AT+ +S  ++
Sbjct: 176 TAIAVDAIINQRDTGVKCIYVAIGQKASSIAAVVRKLEEHDALKHTIIVAATASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRINADEVERLTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGLSVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K + +   + + +KQ   
Sbjct: 413 LDEATRKQLERGQRVTELMKQRQF 436


>gi|71988080|ref|NP_001021529.1| hypothetical protein H28O16.1 [Caenorhabditis elegans]
 gi|42733088|emb|CAF31480.1| C. elegans protein H28O16.1d, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 511

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +++D V +   G  + I
Sbjct: 28  ETGKVLSIGDGIARVYGL-KNIQAEEMVEF---DSGIKGMAMNLDVDNVGVVVFGNDKVI 83

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   +     S  +  K P  + R  
Sbjct: 84  REGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANARRSR-VEVKAPGIIPRLS 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TG++ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 143 VREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNDAGDDKKKLFC 202

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + ++          ++VV AT+ ++  L+ +AP +   + E+F   G
Sbjct: 203 IYVAVGQKRSTVAQIVKRLTDAGAMDYTIVVSATASDAAPLQFLAPYSGCAMGEHFRDNG 262

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 263 KHALIIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSL 322

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 323 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGVRPAINVGLSVSRVGSAAQTK 382

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S+   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 383 AMKQVAGSMKLELAQYRE---VAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQ 433


>gi|114515|sp|P26679|ATPA_ENTHR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|153571|gb|AAA26857.1| H+ ATPase [Enterococcus faecalis]
 gi|153579|gb|AAA26864.1| F1F0-ATPase alpha subunit [Enterococcus faecalis]
          Length = 518

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 171/421 (40%), Gaps = 15/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y   L V+  G ++ +         L +    G+ +     +    G    
Sbjct: 10  ALIKEQIENYQNVLSVEEIGTVTYVGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   G+   +       GRV+N LG+PIDG   +   D
Sbjct: 66  LESNDVGIIILGDFESIREGDKVKRTGKIMEVPVGDALIGRVVNPLGQPIDGLGEIV-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++      
Sbjct: 125 KVRPVEAMAPGVMQRKSVNEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A + +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKDSTVRTQVETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 305 SDDLGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILK 421

Query: 419 Q 419
           Q
Sbjct: 422 Q 422


>gi|145253056|ref|XP_001398041.1| ATP synthase subunit alpha [Aspergillus niger CBS 513.88]
 gi|134083599|emb|CAL00514.1| unnamed protein product [Aspergillus niger]
          Length = 556

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 97/415 (23%), Positives = 177/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +    +      K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPEMLGRVVDALGNPIDGKGPI-PTKVKSRAQLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 187 SVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNTSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CIYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + ++I D +++ A + R+++      P    YP  VF    RLLER     ++   G+
Sbjct: 307 GRHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNEKHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQV 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQ 478


>gi|209695737|ref|YP_002263667.1| flagellum-specific ATP synthase [Aliivibrio salmonicida LFI1238]
 gi|208009690|emb|CAQ79989.1| polar flagellum-specific ATP synthase FliI [Aliivibrio salmonicida
           LFI1238]
          Length = 439

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 152/439 (34%), Positives = 242/439 (55%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E L+Q          +  G +  +  +    T       +G   + +  N +   
Sbjct: 1   MLPLSERLSQYKTSGLTTRAIASGKLVRVVGLTLEATG--CRAPIGSSCMVETVNGEIEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        I       GRVI+ +GKPIDG   +
Sbjct: 59  EVVGFSGDNLFLMPNEQISGVLPGAKVTPIADVSGIPVGMELLGRVIDGVGKPIDGLGDI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +    S     ++R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEQTASFTSTPINPLSRKPIREPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIED LG +  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEDILGTEGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              +++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGNEDQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSREMADAGHYPAIDVERSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +    +   +  ++  ++    + +D+  IG Y+PG +  +D+A    P + ++L+
Sbjct: 358 RVMPQITDEEHMLMSKAVRQVLATCRKNQDLVSIGAYKPGTNPAIDQAFTLKPRLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   +    D+ + + K L
Sbjct: 418 QRMKETVPFDMCKNMLKML 436


>gi|170784727|ref|YP_001718643.1| ATP synthase CF1 alpha subunit [Trachelium caeruleum]
 gi|156598889|gb|ABU85697.1| ATP synthase CF1 alpha subunit [Trachelium caeruleum]
 gi|157267475|gb|ABV26468.1| ATP synthase CF1 alpha subunit [Trachelium caeruleum]
          Length = 500

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y++ + ++  G +  +      +  L + +  G+ V  +      +G  + + 
Sbjct: 13  IRERIKQYNREVKIENTGSVLQVGDGIARIHGLDE-IMAGELVEFEEG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  
Sbjct: 69  SHNVGVVLMGDGLRIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVSEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
               VI     +G++   V + +  +        ++VV   ++    L+ +AP T   +A
Sbjct: 188 QGQNVICVYVAIGQKASSVAQVVTTFQEKGAMEYTIVVAEMANSPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +  +I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYRERHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 QLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGLSVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++V  L   + +  E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVVGQLKLDLAQLTELETFAQ---FASDLDKGTQNQLARGRRLRELLKQS 424

Query: 421 PSDL 424
            S+ 
Sbjct: 425 QSNP 428


>gi|33865030|ref|NP_896589.1| F0F1 ATP synthase subunit alpha [Synechococcus sp. WH 8102]
 gi|81712315|sp|Q7U8W5|ATPA_SYNPX RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33638714|emb|CAE07009.1| ATP synthase subunit alpha [Synechococcus sp. WH 8102]
          Length = 506

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYIS-SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  EDY K++ V       ++      V  L Q    G+ +  +       G  + 
Sbjct: 11  AILKQQIEDYDKSVSVSNVGSVLTVGDGIARVYGL-QQAMAGELLEFEDGTE---GIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+   +       GRV+N+LG+ IDG   +   +
Sbjct: 67  LEDDNVGAVLMGEGLGIQEGSTVKATGKIASVPVGEAMLGRVVNSLGRAIDGKGEIATSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + I S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 127 TRL-IESMAPGIIQRKSVHEPMQTGITAIDAMIPVGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   VG++   V   +E          SV+V A + E   L+ +AP T  +
Sbjct: 186 NQKDQDMICVYVAVGQKAASVANVVEVLRERGALDYSVIVAANASEPAALQYLAPYTGAS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYKGKATLVIYDDLSKQAAAYRQMSLLLRRPPGREAYPGDVFYCHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                KG++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SDAMGKGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSSDLFNSGLRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + +F E         +   +D    + + +   + + LK
Sbjct: 366 RVGGAAQTKAIKKIAGTLKLELAQFAEL---AAFSQFASDLDASTQQQLERGKRLRELLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QPQF 426


>gi|261400614|ref|ZP_05986739.1| ATP synthase F1, alpha subunit [Neisseria lactamica ATCC 23970]
 gi|269209700|gb|EEZ76155.1| ATP synthase F1, alpha subunit [Neisseria lactamica ATCC 23970]
 gi|309379545|emb|CBX21911.1| ATP synthase F1, alpha subunit [Neisseria lactamica Y92-1009]
          Length = 515

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPIGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|90021830|ref|YP_527657.1| flagellum-specific ATP synthase [Saccharophagus degradans 2-40]
 gi|89951430|gb|ABD81445.1| ATPase FliI/YscN [Saccharophagus degradans 2-40]
          Length = 458

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 152/410 (37%), Positives = 234/410 (57%), Gaps = 4/410 (0%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           +L    G ++ +  +      L+  V     VV    N +   +V+  N D  Y+ PV  
Sbjct: 26  HLPTAQGRLTRMVGLTLEAVGLNVPVGSQCRVVLP-HNKNIDAEVVGFNGDKTYLMPVQK 84

Query: 78  GEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V      + ++      GR+IN +G+P+DG   L  G  ++++       +
Sbjct: 85  VEGLQPGARVVPLDAHQHMAIGEHLRGRIINGIGQPLDGKGPL-PGKSNVDMAPSAINPL 143

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R  ++     G+R I+    +  GQRIG+FAGSG+GKS LL M  R    D V++ L+G
Sbjct: 144 SRHPIDAPLDVGVRAINGLLTVGRGQRIGLFAGSGVGKSVLLGMMTRFTTADIVVVGLIG 203

Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV+EFI+  LGD  + ++VV+ + +D++P++R  A      +AE+F  +G N LL+
Sbjct: 204 ERGREVKEFIDQILGDAGMSRAVVIASPADDAPLMRLRAAELCTRVAEFFRDQGLNCLLL 263

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + REI+   GE P  +GYP SVFS++P L+ER G ++K  G+ITA  +VL 
Sbjct: 264 MDSLTRYAQAQREISLAIGEPPATKGYPPSVFSKIPELVERAGNADKGGGSITAFYTVLT 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+  DPIADS R+ILDGHIVL+R LAEEG YP +D  ASVSR+     + D  +    
Sbjct: 324 EGDDLQDPIADSARAILDGHIVLSRDLAEEGIYPAIDISASVSRVMPSIVTPDHLQKAQK 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              L+ R+   +D+  IG Y PG D  +D A+ + P +  ++ Q   + S
Sbjct: 384 FKALLSRYRANKDLISIGAYTPGTDPNIDGAIERYPHLNKYICQGMKEAS 433


>gi|83854834|ref|ZP_00948364.1| ATP synthase subunit A [Sulfitobacter sp. NAS-14.1]
 gi|83941357|ref|ZP_00953819.1| ATP synthase subunit A [Sulfitobacter sp. EE-36]
 gi|83842677|gb|EAP81844.1| ATP synthase subunit A [Sulfitobacter sp. NAS-14.1]
 gi|83847177|gb|EAP85052.1| ATP synthase subunit A [Sulfitobacter sp. EE-36]
          Length = 512

 Score =  309 bits (791), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 180/447 (40%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   V  G+ V   G  
Sbjct: 1   MGIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVYGL-DNVQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G  + +  D V +   G   +I  GD V         P      GRV++ LG PID
Sbjct: 59  --IMGMALNLETDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPIGNGLLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIESTERGLA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLL------SMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           + +                D        +   +G++   V + ++       +  S+VV 
Sbjct: 176 TAVALDAILNQQQINDAAGDDESKKMYCVYVAIGQKRSTVAQLVKKLEETGAIDYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E   ++ +AP +A  +AE+F   G + L+I D +++ A S R+++      P    
Sbjct: 236 ATASEPAPMQYLAPYSATAMAEFFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      + GN   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSAKLGDDAGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGSSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +++   + + +KQ      +
Sbjct: 413 DASTQQLLNRGARLTELMKQPQYSPLT 439


>gi|218892348|ref|YP_002441215.1| type III secretion system ATPase [Pseudomonas aeruginosa LESB58]
 gi|218772574|emb|CAW28357.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           LESB58]
          Length = 440

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 234/419 (55%), Gaps = 12/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G ++ +T        +   V +G+    +  +     L +VI        + P+G    +
Sbjct: 26  GRVTQVTGTLLK--AVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGV 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   R++      GRV++ LG+P DG            +    PP M+R+ 
Sbjct: 84  SSNTEVSPTGGMHRVAVGEHLLGRVLDGLGRPFDGSPPAEPA-AWYPVYRDAPPPMSRRL 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+    G+R ID       GQR+G+FA +G GKSTLL+   R+   D  I++LVGERGR
Sbjct: 143 IERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTILALVGERGR 202

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D     L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+
Sbjct: 203 EVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSL 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G SE  +G+ITA+ +VLV+GD+
Sbjct: 263 TRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSE--RGSITALYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++P+AD  RSILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   
Sbjct: 321 MSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREW 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + ++EE   +  IG Y+ G D   D+A+ ++  I  +L+Q   + S    + +   +L+
Sbjct: 381 LAKYEEVELLLKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETSD---YAQACAQLR 436


>gi|282767707|gb|ADA85889.1| ATPase alpha subunit [Allium cepa]
          Length = 507

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 99/437 (22%), Positives = 177/437 (40%), Gaps = 26/437 (5%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-- 174
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK  
Sbjct: 121 GALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 175 ---STLLSMFARSDCFD----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
               T+L+    ++  +      +   +G++   V +F++  +  N  + S++V AT+ +
Sbjct: 180 IAIDTILNQKQMNESSESETLYCVYVAIGQKRSTVAQFVQILIEANALEYSILVAATASD 239

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF     + L+I D +++ A + R+++      P    +P  V
Sbjct: 240 PAPLQFLAPYSGCAMGEYFRDNSMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 299

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L  
Sbjct: 300 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 359

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 360 RGIRPAINVGLSVSRVGSAAQLKTMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQ 416

Query: 405 KAVHQVPIIYDFLKQSP 421
              ++   + +  KQ  
Sbjct: 417 ALPNRGARLTEVPKQPQ 433


>gi|258407031|ref|ZP_05680181.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9763]
 gi|257841364|gb|EEV65808.1| F0F1 ATP synthase subunit alpha [Staphylococcus aureus A9763]
          Length = 502

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G    I+ GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGLINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTASKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|237751191|ref|ZP_04581671.1| FoF1-type ATP synthase [Helicobacter bilis ATCC 43879]
 gi|229372557|gb|EEO22948.1| FoF1-type ATP synthase [Helicobacter bilis ATCC 43879]
          Length = 505

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 104/431 (24%), Positives = 181/431 (41%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   E ++ +  +  +       + Q G ++S       V  L+  +   + V       
Sbjct: 5   KLKPEEISSIIREKIEQFDLQVDISQVGKVTSYADGVAKVYGLNDVMSY-EMVEFDTGEK 63

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +    V +  +G G+ I  G  V    R  +I       GRV+N +G+P+DG
Sbjct: 64  ---GLALNLEEGSVGVVVLGNGKGIKEGTTVKRLNRLMKIPVGESVIGRVVNTVGEPLDG 120

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +    I  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 121 KGAIESNEYRF-IEQKAPGIMQRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKT 179

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +        I   +G++   V + +           +VVV A++  S  ++ 
Sbjct: 180 TVAIDAIINQKGQGVYCIYVAIGQKESTVAQVVRKLEEHGAMEYTVVVNASASSSAAMQY 239

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP + VTI EYF   G + L+I D +T+ A + RE++      P    +P  VF    R
Sbjct: 240 LAPYSGVTIGEYFRDNGKHALIIYDDLTKHAVAYREMSLILRRPPGREAFPGDVFYIHSR 299

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 300 LLERAAKLSDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNSGIRPA 359

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + +F E +       +   +D    + + + 
Sbjct: 360 INVGLSVSRVGGAAQIKATKQVAGTLRLDLAQFRELQ---AFAQFASDLDESSRRQLERG 416

Query: 411 PIIYDFLKQSP 421
             + + LKQ P
Sbjct: 417 QKMVEVLKQGP 427


>gi|254780617|ref|YP_003065030.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040294|gb|ACT57090.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 509

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 183/432 (42%), Gaps = 23/432 (5%)

Query: 6   ETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  +D+  +    + G + SI      V  L+  +  G+ V     +    G  + 
Sbjct: 10  DILRKRIKDFGNDSEFSEIGRVLSIGDGIARVYGLN-NIRAGEMVQF---SHGVYGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGD 123
           + +D V +  +G  +EIS GD+V   GR    P      GRV++ALG PIDG   + K +
Sbjct: 66  LEVDNVGVVILGSYKEISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPI-KCE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
                 +  P  + RQ V +   TGI+ ID   P+  GQR  +      GK      T L
Sbjct: 125 QRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTFL 184

Query: 179 SMFARSDCF-----DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  +  D          I   +G++   V  F++          S+VVVA++ +   ++ 
Sbjct: 185 NQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAPMQL 244

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + EYF   G + L+  D + + A + R+++      P    YP  VF    R
Sbjct: 245 LAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSR 304

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++TA+  +    ++ +  I  +V SI DG I L   L  +G  P 
Sbjct: 305 LLERAAKMSDALGAGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPA 364

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  ++   + ++ E   +     +   +D    K + + 
Sbjct: 365 INIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYRE---MSSFSKFSSDLDSSTQKFLSKG 421

Query: 411 PIIYDFLKQSPS 422
             + + LKQ   
Sbjct: 422 ERLTELLKQPQF 433


>gi|322379699|ref|ZP_08054012.1| F0F1 ATP synthase subunit alpha [Helicobacter suis HS5]
 gi|321147848|gb|EFX42435.1| F0F1 ATP synthase subunit alpha [Helicobacter suis HS5]
          Length = 503

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 187/432 (43%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           ++   E ++ + ++  ++      + Q G + +       V  L   +   + V     +
Sbjct: 2   LKLKAEEISAIIKERIESFAPDINITQVGRVIAYADGVAKVYGLKDVMSY-EVVEFDTGD 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G    +    V +  +G G+ I  G  V    +  ++       GRVIN LG+PID
Sbjct: 61  R---GLASNLEEGSVGVIVLGGGKNIKEGTSVKRTKQLMKVPVGDAVVGRVINTLGEPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +  K P  M+R+ V +  +TGI+VID   P+  GQR  +      GK
Sbjct: 118 GRGPIEANAFSF-VEQKAPGIMDRKSVHEPLQTGIKVIDALVPIGRGQRELIIGDKQTGK 176

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++  + D     I   +G++   V + +           SVV+ A +  SP ++
Sbjct: 177 TTVAIDAIINQKDQNVICIYVAIGQKESTVAQVVHKLEEYGAMEYSVVINAPASASPAMQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VTI E+F  +G + L++ D +++ A + REI+      P    +P  VF    
Sbjct: 237 YLAPYAGVTIGEHFRDQGRHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHS 296

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +KG  ++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 297 RLLERAAKMSDKKGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFYSGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + +
Sbjct: 357 AINVGLSVSRVGGAAQIKGTKQVAGTLRLDLAQYRELQ---AFAQFASDLDEASRKQLER 413

Query: 410 VPIIYDFLKQSP 421
              + + LKQ P
Sbjct: 414 GQRMVEVLKQPP 425


>gi|288939808|ref|YP_003442048.1| ATP synthase F1 subunit alpha [Allochromatium vinosum DSM 180]
 gi|288895180|gb|ADC61016.1| ATP synthase F1, alpha subunit [Allochromatium vinosum DSM 180]
          Length = 513

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 190/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   +Q      G + S+T     +  LS      + +   G  
Sbjct: 1   MQLNPSEISDLIKQKIEKFELQTEARTEGTVVSVTDGIVRIHGLSD-AQYYEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +   A   GRV++ALG PID
Sbjct: 58  -NTYGLALNLERDSVGAVVLGDYTHLSEGDWVRCTGRVLEVPVGAGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + + +  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-EAEGTSPIEKVAPGVIERKSVDQPVQTGLKAIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D   K I   VG++   +   +           +++V A + +S  ++
Sbjct: 176 TAVAIDAIINQKDTGVKCIYVAVGQKNSSIAAIVRKLEEHGAMDHTIIVAAPAADSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  KG++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDKGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKMTDGKVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ      S
Sbjct: 413 LDEATRKQLQRGERVTELMKQFQYSPMS 440


>gi|239946821|ref|ZP_04698574.1| ATP synthase F1, alpha subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241068659|ref|XP_002408500.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|215492488|gb|EEC02129.1| F0F1-type ATP synthase, alpha subunit, putative [Ixodes scapularis]
 gi|239921097|gb|EER21121.1| ATP synthase F1, alpha subunit [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 512

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 185/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E        + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------FEEIGQVITVGDGIAKIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          ++VV AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTIVVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP+ VF 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPSDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E       G     +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELESFLQFG---SDLDPATKAQ 417

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+       E+    I
Sbjct: 418 IDHGKRLVEILKQAQYHPFPVEEQIVSI 445


>gi|120609166|ref|YP_968844.1| type III secretion system ATPase [Acidovorax citrulli AAC00-1]
 gi|58700621|gb|AAW81012.1| HrcN [Acidovorax citrulli]
 gi|120587630|gb|ABM31070.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Acidovorax citrulli AAC00-1]
          Length = 442

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 158/430 (36%), Positives = 236/430 (54%), Gaps = 13/430 (3%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +  LV + G ++ +      V  L     LG+      +  + L   +V+      
Sbjct: 16  REIAAAPLVRRSGKVAEVIGTLMRVNGLD--AKLGELCHVLDERGELLQAAEVVGFANGQ 73

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +  G  V   G    +       GRVI++LG+PIDG   L   + +  +
Sbjct: 74  SILSPFGSILGVRGGSPVVGLGEVLSVPVGPRLLGRVIDSLGQPIDGKGPLDCSE-TRPV 132

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  M R+ +E    TG++ ID    L  GQR+G+FA +G+GKSTL+ M AR    D
Sbjct: 133 FALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQRMGIFAPAGVGKSTLMGMLARGTQCD 192

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREF+      + + +SVVV ATSD S   R  A   A  +AEY+  
Sbjct: 193 VSVIALIGERGREVREFVEFILGEEGMARSVVVCATSDRSSSERAKAAHVATAVAEYYRD 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+E+PRLLER G     +G+I
Sbjct: 253 QGLKVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSVFAEIPRLLERAGMGA--RGSI 310

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+ +VL + ++ NDPI++ VR ILDGH++L+R +A   +YP +D L S+SR+  +    
Sbjct: 311 TALYTVLYEDESGNDPISEEVRGILDGHMILSRKIAARNQYPAIDVLGSLSRVMSQIVPR 370

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL--- 424
           + ++       L+ ++EE   +  +G YRPG D + D+A+ +   I DFL QS SDL   
Sbjct: 371 EHQQAGGRFRQLMAKYEEIEPLVQMGEYRPGNDPLADEAMEKHAAIRDFLNQSTSDLWDF 430

Query: 425 -SSEDVFQEI 433
             S D   +I
Sbjct: 431 GRSVDTLADI 440


>gi|55976886|gb|AAV68292.1| F1-ATPase alpha subunit [Rafflesia tuan-mudae]
          Length = 412

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 95/411 (23%), Positives = 171/411 (41%), Gaps = 23/411 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-MKAGEMVEFA---SGVKGIALNLEKENVGIVFFGSETAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG P+DG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPLDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIFNQKQMNSKATSESETLSCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVKIMEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  SL   + ++ E   +     +   +D      +H+   + + LKQ  
Sbjct: 356 QVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLHRGARLTEVLKQPQ 403


>gi|241759025|ref|ZP_04757137.1| ATP synthase F1, alpha subunit [Neisseria flavescens SK114]
 gi|241320846|gb|EER57079.1| ATP synthase F1, alpha subunit [Neisseria flavescens SK114]
          Length = 515

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 189/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVDAEVRTRGTVVSVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPIGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYREL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|206889640|ref|YP_002248088.1| ATP synthase F1, alpha subunit [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|226739953|sp|B5YI22|ATPA_THEYD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|206741578|gb|ACI20635.1| ATP synthase F1, alpha subunit [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 502

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 107/436 (24%), Positives = 178/436 (40%), Gaps = 16/436 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M++  E L +   D+ K   V + G ++SI      +  L       + +          
Sbjct: 5   MEEISEYLKKQIADFEKKADVSEVGIVTSIGDGVARIYGL-DNCMASEMLELPNG---VY 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V     G    +  GDLV   GR           GRV+NA+G PIDG   
Sbjct: 61  GMALNLEEDNVGAILFGDDRLVKEGDLVKRTGRVMETPVGEELIGRVVNAIGIPIDGKGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +     S ++    P  + RQ V++  +TG++ ID   P+  GQR  V      GK+ +L
Sbjct: 121 IN-AKTSRKVDVIAPGIIKRQPVKEPLQTGLKAIDAMIPIGRGQRELVIGDRQTGKTAIL 179

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +      I      G+R + V + +E          ++VV AT+ E   ++ +AP
Sbjct: 180 LDTIINQKGQNCICIYVACGQRRQSVVQVVETLKKYGAMDHTIVVAATASEPASMQYLAP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                + EYF  KG + L+  D +T+ A++ R+++      P    YP  VF    RLLE
Sbjct: 240 YVGCAMGEYFRDKGMHALVCYDDLTKQAYAYRQVSLILRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R          G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 300 RAAKLSDAEGGGSLTALPVIETQAGDVSGYIPTNVISITDGQIYLEPELFYAGVRPAINV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++   L   + ++ E   +     +   +D      + +   +
Sbjct: 360 GLSVSRVGGAAQIKAMKQVAGMLRLDLAQYRE---LAAFAQFAADLDKATRALLERGQRM 416

Query: 414 YDFLKQSPS-DLSSED 428
            + LKQ     +  ED
Sbjct: 417 VELLKQDQYVPMPVED 432


>gi|39972915|ref|XP_367848.1| mitochondrial F1 ATPase subunit alpha [Magnaporthe oryzae 70-15]
 gi|145012523|gb|EDJ97177.1| mitochondrial F1 ATPase subunit alpha [Magnaporthe oryzae 70-15]
          Length = 551

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 101/416 (24%), Positives = 177/416 (42%), Gaps = 23/416 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 66  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 121

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    I       GRV++ALG PIDG   +   + S     K P  + RQ
Sbjct: 122 VKEGETVKRTGEIVDIPVGPEMLGRVVDALGNPIDGKGPINTKERSRA-QLKAPGILPRQ 180

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 181 SVNQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSNDETKKLY 240

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  + SVVV AT+ E+  L+ +AP T  +I E+F   
Sbjct: 241 CVYVAVGQKRSTVAQLVKTLEENDAMRYSVVVAATASEAAPLQYLAPFTGASIGEWFRDN 300

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE---KG 305
           G + L+I D +++ A + R+++      P    YP  VF    RLLER           G
Sbjct: 301 GKHSLVIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNRTHGGG 360

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A 
Sbjct: 361 SMTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQ 420

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 421 LKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQKQ 473


>gi|59802944|gb|AAX07676.1| ATP synthase alpha chain-like protein [Magnaporthe grisea]
          Length = 551

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 101/416 (24%), Positives = 177/416 (42%), Gaps = 23/416 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 66  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 121

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    I       GRV++ALG PIDG   +   + S     K P  + RQ
Sbjct: 122 VKEGETVKRTGEIVDIPVGPEMLGRVVDALGNPIDGKGPINTKERSRA-QLKAPGILPRQ 180

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 181 SVNQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSNDETKKLY 240

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  + SVVV AT+ E+  L+ +AP T  +I E+F   
Sbjct: 241 CVYVAVGQKRSTVAQLVKTLEENDAMRYSVVVAATASEAAPLQYLAPFTGASIGEWFRDN 300

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE---KG 305
           G + L+I D +++ A + R+++      P    YP  VF    RLLER           G
Sbjct: 301 GKHSLVIFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNRTHGGG 360

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A 
Sbjct: 361 SMTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQ 420

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 421 LKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQKQ 473


>gi|291232529|ref|XP_002736205.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           alpha subunit-like [Saccoglossus kowalevskii]
          Length = 550

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 177/420 (42%), Gaps = 22/420 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +K  + + G + SI      V  L +     + V     +S   G  + +  D V I   
Sbjct: 62  TKADLEETGRVMSIGDGIARVYGL-KNCQAEEMVEF---SSGIKGMAMNLEPDSVGIVVF 117

Query: 76  GIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + I  GD+V   G    +       GRV++ALG  IDG  ++ K      +  K P 
Sbjct: 118 GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGAI-KSPERRRVGLKAPG 176

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------ 188
            + R  V++   TGI+ +D   P+  GQR  +      GK+ +      +          
Sbjct: 177 IIPRISVKEPMLTGIKAVDSLVPIGRGQRELIIGDRQTGKTAVAIDAIINQKKFNEGSNE 236

Query: 189 ----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                 I   +G++   V + +      D +K ++VV AT+ ++  L+ ++P +A  + E
Sbjct: 237 KQKLYCIYCAIGQKRSTVAQIVHRLTQEDAMKYTIVVSATASDAAPLQYLSPYSACAMGE 296

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF   G + L++ D +++ A + R+++      P    YP  VF    RLLER       
Sbjct: 297 YFRDNGKHGLIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDA 356

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+ 
Sbjct: 357 FGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLENELFYKGIRPAINVGLSVSRVG 416

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A +   K++  S+   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 417 AAAQTKAMKQVAGSMKLELAQYRE---VAAFAQFGSDLDASTQALLNRGVRLTELLKQGQ 473


>gi|291615438|ref|YP_003525595.1| ATP synthase F1, subunit alpha [Sideroxydans lithotrophicus ES-1]
 gi|291585550|gb|ADE13208.1| ATP synthase F1, alpha subunit [Sideroxydans lithotrophicus ES-1]
          Length = 513

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   ++ L     +N          G + S+T     +  LS  V  G+ +      
Sbjct: 1   MKLNPSEISNLIRSRIENFEALTQARTEGTVVSVTDGIVRIHGLSD-VMQGEMLEFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR   +       GRV+NALG+PID
Sbjct: 57  RNTFGLALNLERDSVGAVILGEYEHITEGDTVKCTGRILEVPVGPELRGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    ++ +I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKMTDKIEKVAPGVIARKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   VG++   V   +         + ++VV AT+ +S  ++
Sbjct: 176 TAVAVDAIINQKGQNMTCIYVAVGQKASTVANVVRKLEEHGALEYTIVVAATASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 EADLFNAGIRPAINAGVSVSRVGGAAQTKVIKKLGGGVRLALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +  ++ + +KQ      S
Sbjct: 413 LDESTRKQLERGRLVTELMKQLQYSPLS 440


>gi|255712379|ref|XP_002552472.1| KLTH0C05698p [Lachancea thermotolerans]
 gi|238933851|emb|CAR22034.1| KLTH0C05698p [Lachancea thermotolerans]
          Length = 548

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 181/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+      V  L+  V   + V     +S   G  + +    V I   G    +
Sbjct: 67  ETGRVLSVGDGIARVFGLN-NVQAEELVEF---SSGVKGMALNLEPGQVGIVLFGSDRLV 122

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G++V   G+   +       GRV++ALG PIDG   +     S     K P  + R+ 
Sbjct: 123 KEGEVVKRTGQIVDVPVGPDMLGRVVDALGNPIDGKGPIEAAGRSRA-QVKAPGILPRRS 181

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    ++  D       
Sbjct: 182 VHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGSDESKKLYC 241

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + ++     D +K +V+V AT+ E+  L+ +AP TA  I E+F   G
Sbjct: 242 VYVAVGQKRSTVAQLVQTLEQHDAMKYTVIVAATASEAAPLQYIAPFTAAAIGEWFRDNG 301

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NI 307
            + L++ D +++ A + R+++      P    YP  VF    RLLER     ++ G  ++
Sbjct: 302 RHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGAGSL 361

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 362 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 421

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + + +   +   LKQS 
Sbjct: 422 ALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLARGERLTQLLKQSQ 472


>gi|291521328|emb|CBK79621.1| ATP synthase F1 subcomplex alpha subunit [Coprococcus catus GD/7]
          Length = 506

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 106/435 (24%), Positives = 177/435 (40%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ + ++  K       V   G +  +      +  L +    G+ +   G  
Sbjct: 1   MNLRPEEISSVIKEQIKRYKSELEVSDIGTVVQVADGIARIHGL-ENAMQGELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ +  D V    +G    I+ GD+V   GR   +       GRV+NALG+PID
Sbjct: 58  -DVYGMVMNLEEDNVGAVLLGSNRNINEGDVVKTTGRVVEVPVGDAMLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +       +I       + R++V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIDTNAFR-QIERVAHGVIERKKVDTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +     V  I   +G++   V   +        +  +VVV AT+ E   L+
Sbjct: 176 TAIALDTIINQKGQDVLCIYVAIGQKQSTVSSIVHTLESFGAMDYTVVVAATASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E +  +G +VL++ D +T+ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIGEEWMEQGKDVLIVYDDLTKHAAAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   +   G  P
Sbjct: 296 RLLERASRLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETEMFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   +   + +F E +     G     +D    + + Q
Sbjct: 356 AINAGLSVSRVGGDAQIKAMKKIAGPIRTELAQFRELQSFAQFG---SDLDADTLQNLAQ 412

Query: 410 VPIIYDFLKQSPSDL 424
              I   LKQ     
Sbjct: 413 GERIQQILKQPQYQP 427


>gi|329118578|ref|ZP_08247282.1| ATP synthase F1 sector alpha subunit [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465313|gb|EGF11594.1| ATP synthase F1 sector alpha subunit [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 515

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 109/444 (24%), Positives = 192/444 (43%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     +   G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPAEISDLLKAKIENLDTKQELRTRGTVISVTDGIVRVHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDEVKCTGRILEVPIGRELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +LS  I    P  + R+ V++  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AELSAPIEKIAPGVIARKSVDQPMQTGLKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   VG++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAVGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +++             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINEDEVEKLTDGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLEHGEVVTELMKQKQF 436


>gi|224438544|ref|ZP_03659464.1| F0F1 ATP synthase subunit alpha [Helicobacter cinaedi CCUG 18818]
 gi|313144970|ref|ZP_07807163.1| ATP synthase subunit alpha [Helicobacter cinaedi CCUG 18818]
 gi|313130001|gb|EFR47618.1| ATP synthase subunit alpha [Helicobacter cinaedi CCUG 18818]
          Length = 504

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 179/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+++ N+ + + G + +       V  L+  V   + V     ++   G    
Sbjct: 12  SIIKERIENFNINIDISETGKVIAYADGVAKVYGLN-NVMYYEMVEFDTGDT---GIAFN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V    +  ++       GRVIN LG+PIDG  ++   +
Sbjct: 68  LEESSVGVVVLGSGRTIKEGTSVKRLKKLMKVPVGDAVVGRVINTLGEPIDGKGAIEASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 YRF-VEEKAPGIMSRKSVHQPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAVDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   VG++   V + +           ++VV A +  S  ++ +AP T VT
Sbjct: 187 NQKGQDVVCIYVAVGQKESTVAQVVRKLEEHGAMEYTIVVNAPASFSAAMQFLAPYTGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF     + L+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 247 IGEYFRDNARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     +    I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDDLGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFSQFASDLDESSRKQLERGQRMVEILK 423

Query: 419 QSP 421
           Q P
Sbjct: 424 QPP 426


>gi|89112852|gb|ABD61038.1| ATPase alpha subunit [Iris sp. Qiu 95091]
          Length = 431

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 97/417 (23%), Positives = 174/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 QLRAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|34498058|ref|NP_902273.1| type III secretion system ATPase [Chromobacterium violaceum ATCC
           12472]
 gi|34103913|gb|AAQ60273.1| probable type III secretion system ATP synthase [Chromobacterium
           violaceum ATCC 12472]
          Length = 444

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 158/420 (37%), Positives = 232/420 (55%), Gaps = 12/420 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G ++ I       +       L +    +    +   +V+ +  D V + P     
Sbjct: 30  VELFGRVTEIGPTLLKASL--PGASLSELCRLEPSGIE--AEVVAVTGDHVMLSPFKEPL 85

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +++G  V   G   ++       GRV++ LG+P+DGD  L        +    P  + R
Sbjct: 86  GVTIGSRVRPSGSPHQLRLGDFLLGRVVDGLGRPLDGD-ELPADSELRSLDGPAPNPLTR 144

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q ++     G+R ID       GQRIG+FA +G GKSTLL M       D ++++L+GER
Sbjct: 145 QLIDTPLPLGVRAIDGLLTCGMGQRIGIFAAAGGGKSTLLGMICDGSLADVIVLALIGER 204

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+      +   +S+VVV+TSD   + R  A  TA  IAE+F  +G NVLL++D
Sbjct: 205 GREVREFLEHTLSEEARSRSIVVVSTSDRPALERLKAAYTATAIAEHFRDQGKNVLLMMD 264

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + REI   +GE   A GYP S F+ LPRLLER GP+E   G+IT + +VLV+G
Sbjct: 265 SLTRFARASREIGLAAGEPAAAGGYPPSFFARLPRLLERAGPAET--GSITGIYTVLVEG 322

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           DN N+P+AD VRSILDGHIVL+R LAE   YP +D  ASVSR+  +  SA+ ++    L 
Sbjct: 323 DNLNEPVADEVRSILDGHIVLSRKLAETNHYPAIDIGASVSRIMGQIVSAEHRQQAGKLR 382

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  ++E   +  +G Y+PG D   D+A+ +   I  FL QS ++ +    F+E  ++L
Sbjct: 383 RLMAAYKEIELLVRVGEYQPGQDAEADEALERKDAIRQFLCQSVTEKND---FEETLEQL 439


>gi|322387995|ref|ZP_08061602.1| ATP synthase F1 sector alpha subunit [Streptococcus infantis ATCC
           700779]
 gi|321141268|gb|EFX36766.1| ATP synthase F1 sector alpha subunit [Streptococcus infantis ATCC
           700779]
          Length = 501

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDSLIGRVVDPLGRPVDGLGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 N-TDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|169826598|ref|YP_001696756.1| ATP synthase subunit alpha [Lysinibacillus sphaericus C3-41]
 gi|226739907|sp|B1HM54|ATPA_LYSSC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|168991086|gb|ACA38626.1| ATP synthase subunit alpha [Lysinibacillus sphaericus C3-41]
          Length = 502

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V + G +  I         L      G+ +         +G    
Sbjct: 10  SLIKQQIENYESELKVSEVGTVIRIGDGIALAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G   +I  GD V   GR   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEEGNVGIVILGPYTDIKEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPVDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I S     M R+ V +  +TGI+ ID   P+  GQR  +     +GK+++      
Sbjct: 126 -SRPIESPAFGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQVGKTSVAIDTIL 184

Query: 184 SDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   +G++   VR  +E          ++VV A + +   L  +AP   V+
Sbjct: 185 NQDGENMICIYVAIGQKESTVRGVVETLRKHGALDYTIVVTAAASQPAPLLFLAPFAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMLQGKHVLIVYDDLSKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NETYQNGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFNSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D I    + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLAAFRELESFAQFG---SDLDKITLAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDLN 425


>gi|114322018|ref|YP_743701.1| F0F1 ATP synthase subunit alpha [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310604|sp|Q0A4M6|ATPA_ALHEH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114228412|gb|ABI58211.1| ATP synthase F1 subcomplex alpha subunit [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 513

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 102/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +N          G I S+      +  L+     G+ +      
Sbjct: 1   MQLNPSEISELIKRRIENFEAVAEARNQGTIVSVGDGICRIHGLAD-AMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +  D V    +G  E +S GD V   GR   +       GRV++ALG P+D
Sbjct: 58  -DTFGMALNLERDSVGAVILGDYEHLSEGDTVKCTGRILEVPVGESLLGRVVDALGNPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               + K + S  +    P  ++RQ V++  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 AKGEI-KAEGSSPVEKVAPGVISRQSVDQPVQTGLKAVDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +   ++  + +   K I   +G++   +   +E     D L  ++VV A++ ES  ++
Sbjct: 176 TAVAIDAIINQKNSGIKCIYVAIGQKASSIASVVEKLKEHDALDHTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A      + EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCAMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINAEEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGLSVSRVGGSAQTKLIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +   + + +KQ  
Sbjct: 413 LDEATRKQLERGQRVMELMKQPQ 435


>gi|126653746|ref|ZP_01725664.1| flagellum-specific ATP synthase [Bacillus sp. B14905]
 gi|126589710|gb|EAZ83846.1| flagellum-specific ATP synthase [Bacillus sp. B14905]
          Length = 441

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 169/437 (38%), Positives = 253/437 (57%), Gaps = 14/437 (3%)

Query: 9   AQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-----VHQGKNSDNLGQV 62
           AQL E         + G ++ +  +   +        +GD            +   L +V
Sbjct: 4   AQLIEHIPHMPTFKKFGRVTRVVGLM--IESQGPDSSIGDVCKIHVETVNNGHQIILAEV 61

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    +IV + P     EIS+G LV   G    +       G+V++++G PIDG   L K
Sbjct: 62  VGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPELIGKVLDSMGNPIDGT-LLPK 120

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G +++      P  + R  + +  + G++ ID    + +GQR+G+FAGSG+GKSTLL M 
Sbjct: 121 GLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKSTLLGMI 180

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D  +I+L+GERGREVREFI  D   + L +S+VV ATSD+  ++R     TA  
Sbjct: 181 ARNTQADLNVIALIGERGREVREFIERDLGPEGLSRSIVVAATSDQPALMRIKGAFTATA 240

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF ++G NV+L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G +
Sbjct: 241 IAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLLERTGTN 300

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           EK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L SVSRL
Sbjct: 301 EK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVLKSVSRL 358

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +     + KK    L  L + ++++ D+  IG Y+ G    +D+A+H  P+I  +LKQ 
Sbjct: 359 MNHVAEPEHKKAAERLRELYYTYDKSEDLINIGAYKRGTSREIDEAIHYEPLITTYLKQG 418

Query: 421 PSD-LSSEDVFQEITKK 436
             D ++ E+   E+   
Sbjct: 419 YLDKVTLEESVNELISL 435


>gi|295690883|ref|YP_003594576.1| ATPase, FliI/YscN family [Caulobacter segnis ATCC 21756]
 gi|295432786|gb|ADG11958.1| ATPase, FliI/YscN family [Caulobacter segnis ATCC 21756]
          Length = 467

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 165/445 (37%), Positives = 250/445 (56%), Gaps = 13/445 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62
           +L +L    E      V   G ++++  +          + +G  V  +      L  +V
Sbjct: 23  SLRSLIAAVERLDPLTV--YGRVAAVNGLLIEARGGLTRLAVGARVEIERLGQTALPAEV 80

Query: 63  IRINLDIVYICPVGIGEEISLGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +        + P G  E ++ G  +     G   + P+  W GR+INA G+PIDG   L 
Sbjct: 81  VGFRETRALLMPFGPVEGVAPGAEIRIVPEGA-VVRPTKAWLGRIINAFGEPIDGLGPLP 139

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +G++   + +  PPA  R RV +    G+R +++FT  C GQR+G+FAGSG+GKS LLSM
Sbjct: 140 QGEVPYPLKTAPPPAHARGRVGERLDLGVRSMNVFTTTCRGQRLGIFAGSGVGKSVLLSM 199

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            A+    D V++ L+GERGREVREF+E+    + L+++VVVVATSDE  + R+ A    +
Sbjct: 200 LAKEATCDAVVVGLIGERGREVREFVEETLGEEGLRRAVVVVATSDEPALTRRQAAYMTL 259

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I+EY   +   VL ++DS+TRFA + REI   +GE P  +GY  +VF+ELP+LLER GP
Sbjct: 260 AISEYMRDQDQEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGP 319

Query: 300 SE-----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                       ITA+ +VLVDGD+HN+PIAD+ R ILDGHIV+ R++AE GR+P ++ L
Sbjct: 320 GPIRADGTTAAPITALFTVLVDGDDHNEPIADATRGILDGHIVMERAIAERGRFPAINVL 379

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S+SR         E+ +V     ++  +    ++  IG YR G D ++D+A+   P I 
Sbjct: 380 KSISRTMPGCQLPHERDIVKGARQVMAAYSNMEELIRIGAYRAGADPVVDRAIRLNPAIE 439

Query: 415 DFLKQSPSDLSS-EDVFQEITKKLQ 438
            FL Q   + +S +D F  + + LQ
Sbjct: 440 AFLSQDKEEATSLDDSFGLLGQILQ 464


>gi|57115585|gb|AAW33099.1| F1-ATPase alpha subunit [Hibiscus rosa-sinensis]
          Length = 424

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|50555055|ref|XP_504936.1| YALI0F03179p [Yarrowia lipolytica]
 gi|49650806|emb|CAG77741.1| YALI0F03179p [Yarrowia lipolytica]
          Length = 536

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 100/427 (23%), Positives = 177/427 (41%), Gaps = 22/427 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+      V  L+      + V      S   G  + +    V I   G    +
Sbjct: 53  ETGRVLSVGDGIARVFGLNNIQAE-ELVEFA---SGVKGMALNLEAGQVGIVLFGSDRLV 108

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G+ V   G    +       GRV++ALG PIDG   + + +  +    K P  + R  
Sbjct: 109 KEGETVKRSGSIVDVPVGPALLGRVVDALGNPIDGKGPI-ETEFRIRAQVKAPGILPRTS 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    +   D       
Sbjct: 168 VNEPMQTGLKAVDALVPIGRGQRELIIGDRQTGKTQIAIDTILNQKRWNYGQDEKKKLYC 227

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP T   + E+F   G
Sbjct: 228 VYVAVGQKRSTVAQLVQTLEHHDALKYSIIVAATASEAAPLQYLAPFTGTAMGEWFRDNG 287

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
              L++ D +++ A + R+++      P    YP  VF    RLLER     +    G++
Sbjct: 288 KGALIVFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNEREGGGSL 347

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 348 TALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 407

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             K++  SL   + ++ E   +     +   +D    + + +   +   LKQ  +   S 
Sbjct: 408 AMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLTRGERLTLLLKQKQASPMSS 464

Query: 428 DVFQEIT 434
           +    + 
Sbjct: 465 EEMVPLI 471


>gi|329913259|ref|ZP_08275910.1| ATP synthase alpha chain [Oxalobacteraceae bacterium IMCC9480]
 gi|327545403|gb|EGF30620.1| ATP synthase alpha chain [Oxalobacteraceae bacterium IMCC9480]
          Length = 511

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 192/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLSDSAEIRNQGTVISVSDGICRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR    P     CGRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGSVILGDYEHISEGDTVKCTGRILEVPIGPELCGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTAPIEKIAPGVIARQSVSQPMQTGLKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
           + +      +        I   +G++   ++  +      + ++ ++VV A++ ES  ++
Sbjct: 176 TAVAIDAIINQKGQGVTCIYVAIGQKASSIKNIVRSLELHNAMEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    YP  VF    
Sbjct: 236 FVAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNPDYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETSLFNAGVRPAINAGISVSRVGGAAQTKVIKNLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + LKQ+     S
Sbjct: 413 LDASTRKQLDRGARVTELLKQAQYSPLS 440


>gi|41179050|ref|NP_958406.1| ATP synthase CF1 alpha subunit [Chlamydomonas reinhardtii]
 gi|114513|sp|P26526|ATPA_CHLRE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|28269773|tpg|DAA00951.1| TPA_inf: CF1 ATP synthase alpha subunit [Chlamydomonas reinhardtii]
          Length = 508

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 180/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +  L E Y+  +  V  G +  +      +  L + +  G+ +  +      LG  + + 
Sbjct: 13  IKDLIEQYTPEVKMVDFGIVFQVGDGIARIYGLEKAMS-GELLEFEDG---TLGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +G G +I+ G  V   G+   I     + GRV++ L +P+DG  ++   D S
Sbjct: 69  ANNVGAVLLGDGLKITEGSRVRCTGKIAEIPVGEAYLGRVVDGLARPVDGKGAVQTKD-S 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
             I S  P  + R+ V +   TG+  +D   P+  GQR  +      GK+ +   ++  +
Sbjct: 128 RAIESPAPGIVARRSVYEPLATGLVAVDAMIPVGRGQRELIIGDRQTGKTAIAVDTILNQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           +++V+A ++E   L+ +AP T  T+A
Sbjct: 188 KGKGVICVYVAIGQKASSVAQVLNTLKERGALDYTIIVMANANEPATLQYLAPYTGATLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G   L I D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYTGRPTLTIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNN 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 308 ALGEGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLAAGLFNSGLRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGARLREILKQP 424

Query: 421 PSDLSSED 428
            S   S +
Sbjct: 425 QSSPLSVE 432


>gi|156974019|ref|YP_001444926.1| type III secretion system ATPase [Vibrio harveyi ATCC BAA-1116]
 gi|41834180|gb|AAS13318.1| VscN [Vibrio harveyi]
 gi|156525613|gb|ABU70699.1| hypothetical protein VIBHAR_01730 [Vibrio harveyi ATCC BAA-1116]
          Length = 440

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 155/434 (35%), Positives = 234/434 (53%), Gaps = 12/434 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRIN 66
            Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+   
Sbjct: 10  TQQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQ 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
                + P+G    IS    V   G+   +       G++++ LG+P DG  S  +    
Sbjct: 68  QHHALLTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGSQS-TEPSAW 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS 
Sbjct: 127 YPVYRDAPPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSA 186

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +++L+GERGREVREFI  D   + + +SV+VVATSD   + R  A   A +IAEY
Sbjct: 187 DVDVTVLALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEY 246

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  
Sbjct: 247 FRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK-- 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++ 
Sbjct: 305 GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQI 364

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + 
Sbjct: 365 VDKTHQAPAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEP 424

Query: 425 SSEDVFQEITKKLQ 438
           S     +E   +L+
Sbjct: 425 SE---LEETVTQLR 435


>gi|388096|gb|AAA20119.1| yscN [Yersinia pseudotuberculosis]
 gi|392946|gb|AAA73398.1| YscN [Yersinia pseudotuberculosis]
          Length = 439

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 159/427 (37%), Positives = 231/427 (54%), Gaps = 12/427 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYIC 73
              L+   G ++ +T        +   V +G+    +  ++      +VI        + 
Sbjct: 17  GSRLIQIRGRVTQVTGTLLK--AVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLI 74

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+G    IS    V   G   ++       G+V++ LG+P DG   L +      +    
Sbjct: 75  PLGEMYGISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGQPFDG-GHLPEPAAWYPVYQDA 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  M+R+ +      GIRVID       GQR+G+FA +G GKSTLL+   RS   D  ++
Sbjct: 134 PAPMSRKLITTPLSLGIRVIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVL 193

Query: 193 SLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERG EVREFIE D   + L+K+ +VVATSD   + R  A   A +IAEYF  +G  
Sbjct: 194 ALIGERGPEVREFIESDLGEEGLRKAFLVVATSDRPSMERAKAGFVATSIAEYFRDQGKR 253

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S K  G+ITA+ 
Sbjct: 254 VLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITALY 311

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  S + K 
Sbjct: 312 TVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKT 371

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               L  L+ ++EE   +  IG Y+ G D   D+A+ ++  I  +L Q   +LS    F 
Sbjct: 372 WAGHLRRLLAKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELSH---FN 428

Query: 432 EITKKLQ 438
           E    L+
Sbjct: 429 ETLNLLE 435


>gi|320546477|ref|ZP_08040792.1| ATP synthase F1 sector alpha subunit [Streptococcus equinus ATCC
           9812]
 gi|320448862|gb|EFW89590.1| ATP synthase F1 sector alpha subunit [Streptococcus equinus ATCC
           9812]
          Length = 501

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 177/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---TFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|190358297|sp|A8F2U2|ATPA_RICM5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 510

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/435 (23%), Positives = 181/435 (41%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     + KG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEAKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 417

Query: 407 VHQVPIIYDFLKQSP 421
           +     + + LKQ+ 
Sbjct: 418 IDHGKRLVEILKQAQ 432


>gi|308153649|sp|P07251|ATPA_YEAST RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|496674|emb|CAA56001.1| C-545 protein [Saccharomyces cerevisiae]
 gi|536167|emb|CAA84924.1| ATP1 [Saccharomyces cerevisiae]
 gi|332322831|dbj|BAK20454.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
 gi|332322832|dbj|BAK20455.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
 gi|332322833|dbj|BAK20456.1| F1F0-ATPase complex [Saccharomyces cerevisiae]
          Length = 545

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 189/439 (43%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 39  KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 94

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 95  GVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 154

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 155 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 213

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 214 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 273

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 274 SEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 333

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF   PRLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 334 DVFYLHPRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAEL 393

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 394 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 450

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 451 TKQTLVRGERLTQLLKQNQ 469


>gi|169766380|ref|XP_001817661.1| ATP synthase subunit alpha [Aspergillus oryzae RIB40]
 gi|238483087|ref|XP_002372782.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
 gi|83765516|dbj|BAE55659.1| unnamed protein product [Aspergillus oryzae]
 gi|220700832|gb|EED57170.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus flavus
           NRRL3357]
          Length = 556

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 22/420 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   L     S     K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPLNTKAKSRA-QLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 187 SVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNTSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CIYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + ++I D +++ A + R+++      P    YP  VF    RLLER          G+
Sbjct: 307 GRHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDTHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQV 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ      S
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMS 483


>gi|331242832|ref|XP_003334061.1| ATP synthase subunit alpha [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309313051|gb|EFP89642.1| ATP synthase subunit alpha [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 559

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 108/437 (24%), Positives = 183/437 (41%), Gaps = 29/437 (6%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCL--------GDFVVHQGKNSDNLGQVIRINLDIVY 71
           V + G + +I      V  L     +         + V     +S   G  + +  D V 
Sbjct: 66  VQETGRVLTIGDGIARVYGLRNVQGIHFLLATISEEMVEF---SSGVRGMCLNLEADNVG 122

Query: 72  ICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           +   G    I  GD V   G+   +       GRV++ALG PIDG   +   +     + 
Sbjct: 123 VTIFGSDRLIKEGDTVKRTGQIVDVPVGPELLGRVVDALGNPIDGKGPIACKERRRASL- 181

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSD 185
           K P  + R+ V +   TGI+ ID   P+  GQR  +      GK      T+L+    +D
Sbjct: 182 KAPGVLPRRSVNQPMMTGIKSIDAMVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWND 241

Query: 186 CFD-----KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
             D       +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP +  
Sbjct: 242 GTDETQKLYCVYVAVGQKRSTVAQMVQTLEENDALKYSIIVAATASEAAPLQYLAPFSGC 301

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 302 AMGEWFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 361

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              +   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SV
Sbjct: 362 MNDKLGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFFKGVRPAINVGLSV 421

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   K +  SL   + ++   RD+     +   +D      + +   + + L
Sbjct: 422 SRVGSAAQTKIMKSVSGSLKLYLAQY---RDVAAFAQFGSDLDASTRYLLSRGARLTELL 478

Query: 418 KQSPSDLSSEDVFQEIT 434
           KQ      + +V   I 
Sbjct: 479 KQGQYQPLAFEVQVPIL 495


>gi|219123734|ref|XP_002182174.1| synthase of mitochondrial ATP synthase [Phaeodactylum tricornutum
           CCAP 1055/1]
 gi|217406135|gb|EEC46075.1| synthase of mitochondrial ATP synthase [Phaeodactylum tricornutum
           CCAP 1055/1]
          Length = 544

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 101/434 (23%), Positives = 177/434 (40%), Gaps = 20/434 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           AED  K    + G + S+      V  LS  V  G+ VV         G  + +  D V 
Sbjct: 57  AEDSGKKYA-ETGSVISVGDGIARVYGLS-NVQAGEMVVFSAG---LRGMALNLEEDNVG 111

Query: 72  ICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           +   G   +I  GD V   G    +       GRV++ +G+PIDG  SL K   S     
Sbjct: 112 VVIFGDDRDILEGDTVKRTGAIVDVPVGNELLGRVVDGIGQPIDGGASLEKCKRSRA-EV 170

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK- 189
           K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +      +      
Sbjct: 171 KAPGIIPRESVSEPMLTGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKAE 230

Query: 190 ---VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYF 245
               I   VG++   + + +            ++V AT+ ++  L+ +AP T   + E+F
Sbjct: 231 PLACIYVGVGQKRSTIAQLVGQLDERGAMDNCIIVAATASDAAPLQFLAPYTGAAMGEFF 290

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS--EKE 303
              G + ++  D +++ A + R+++      P    YP  VF    RLLER         
Sbjct: 291 RDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMHRNNG 350

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +     + +  I  +V SI DG I L   L  +G+ P +    SVSR+   
Sbjct: 351 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSA 410

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           A     K +  ++   + ++ E   +     +   +D    + +++   +Y+ LKQ    
Sbjct: 411 AQYKATKAVAGTMKLELAQYRE---VAAFAKFGSDLDPATQQQLNRGVRLYELLKQGQYQ 467

Query: 424 LSSEDVFQEITKKL 437
                  +E+   L
Sbjct: 468 PYEP---EEVVAAL 478


>gi|187934498|ref|YP_001885044.1| flagellar protein export ATPase FliI [Clostridium botulinum B str.
           Eklund 17B]
 gi|187722651|gb|ACD23872.1| flagellar protein export ATPase FliI [Clostridium botulinum B str.
           Eklund 17B]
          Length = 435

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 165/416 (39%), Positives = 243/416 (58%), Gaps = 9/416 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIRINLDIVYICP 74
           + + +   G ++ +  +   V  +  +V  G+  +    KN+    +V+      V + P
Sbjct: 15  NTSSIYTEGVVNKVIGLTVEVKGIKAFV--GELCIIYNEKNAPVNCEVVGFKDGFVVLMP 72

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     IS G  V        +  S    G +I+ LGKP+ G++ +   D    + +  P
Sbjct: 73  LDELIGISPGCRVVPMRKPLSVKCSDKLLGEIIDGLGKPLRGEELVQGED--YPLENNPP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R+++   TGIR ID F     GQRIG+FAGSG+GKST L M AR    D  +I+
Sbjct: 131 DPLKRKRIKEIMPTGIRAIDGFLTCGDGQRIGIFAGSGVGKSTTLGMIAREAKADVNVIA 190

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EFI +D   + +KKSVVV ATSD+  ++R    LTA  IAEYF  KG  V
Sbjct: 191 LIGERGREVLEFIEKDLGPEGMKKSVVVCATSDKPALIRLKGALTATAIAEYFRDKGKKV 250

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           +L++DS+TRFA + RE+    GE P  +GY  SVF++LP+L+E+ G SE   G+ITA  +
Sbjct: 251 ILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAKLPKLMEKSGTSED--GSITAFYT 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L SVSRL +    ++  K 
Sbjct: 309 VLVDGDDFNEPIADAVRGILDGHIVLSRSLAHKNHYPAIDILNSVSRLMNSIAPSEHIKA 368

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            S    L+  ++E+ D+  IG Y  G +  +D A+     I +FL+Q+ ++ S+ D
Sbjct: 369 ASIARDLLATYKESEDLINIGAYVKGSNKKIDLAISYHDKIEEFLRQTVNEKSNFD 424


>gi|332363076|gb|EGJ40863.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK355]
          Length = 501

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDKAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|56384659|gb|AAO59388.2| F1-ATPase alpha subunit [Brassica juncea]
          Length = 507

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 177/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P     
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAS 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|2645893|gb|AAB87529.1| F1 ATPase a-subunit [Panax ginseng]
          Length = 507

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 174/439 (39%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRISNFYTHFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVPKQPQ 435


>gi|71842282|ref|YP_277370.1| ATP synthase CF1 alpha subunit [Emiliania huxleyi]
 gi|116237304|sp|Q4G397|ATPA_EMIHU RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|52547726|gb|AAU81898.1| ATP synthase F1 alpha subunit [Emiliania huxleyi]
 gi|60101525|gb|AAX13869.1| ATP synthase CF1 alpha chain [Emiliania huxleyi]
          Length = 499

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y + + +   G +  I      V  L Q V  G+ +     +   +G  + + 
Sbjct: 13  IRQQIESYDQEVQIDNVGTVLQIGDGIARVYGLEQ-VMAGELLEF---DDSTVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G  I  G  V   G+  ++     + GRV+N+L KPIDG   +   +  
Sbjct: 69  NDNVGAVLMGPGLGILEGSAVRSTGKIAQVPVGDAFLGRVVNSLAKPIDGKGDIPASETR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+++      + 
Sbjct: 129 L-VESMAPGIITRKSVCEPVQTGITAIDSMIPIGRGQRELIIGDRQTGKTSVAIDTIINQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V   +           +++V A +DE   L+ +AP T   +A
Sbjct: 188 KTEDVICVYVAIGQKASSVAGVVSTLEDKGALGYTIIVAANADEPATLQYIAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG   +++ D +T+ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYKGKATVIVYDDLTKQASAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQAELARGVRLREMLKQK 424

Query: 421 PSDLSSED 428
            +   S +
Sbjct: 425 QNSPISVE 432


>gi|55976874|gb|AAV68286.1| F1-ATPase alpha subunit [Mitrastemon yamamotoi]
          Length = 419

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 98/418 (23%), Positives = 173/418 (41%), Gaps = 23/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRAASESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              VG++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            K++  SL   + ++ E   +     +   +D      +++   + +  KQ      S
Sbjct: 357 MKQICGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLS 411


>gi|3273600|gb|AAC24782.1| F1-ATPase alpha subunit [Acorus calamus]
          Length = 420

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 173/413 (41%), Gaps = 22/413 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V          G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVDGLNE-IQAGEMVEFANG---VQGIALNLENENVGIVIFGSDTAIKEGDLV 57

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDYE-RKRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +          L+           +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGNEKEKLYCVYVAIG 176

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++       L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 177 QKRSTVAQLVQILSANQALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVC 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            SL   + ++ E   +     +   +D      +++   + + LKQ   +  +
Sbjct: 357 GSLKLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTEVLKQPQYEPLT 406


>gi|168239299|ref|ZP_02664357.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194738136|ref|YP_002114428.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194713638|gb|ACF92859.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197287999|gb|EDY27386.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 433

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVTALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|152993356|ref|YP_001359077.1| F0F1 ATP synthase subunit alpha [Sulfurovum sp. NBC37-1]
 gi|189081326|sp|A6QB61|ATPA_SULNB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151425217|dbj|BAF72720.1| F0F1-type ATP synthase, alpha subunit [Sulfurovum sp. NBC37-1]
          Length = 504

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 106/431 (24%), Positives = 176/431 (40%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++  +N  +     + G +  I     TV  L+  V  G+ V       
Sbjct: 4   KLQADEISSIIKERIENFEIDVDINEIGKVVGIADGITTVYGLN-NVMAGEVVEFDNGAK 62

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G V+ +    V +  +G    I  G  V   G   +        GRV+N LG PIDG
Sbjct: 63  ---GLVLNLEEANVGVVVLGTSAGIKEGMSVKRSGALLKTPVGDGLMGRVVNPLGDPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +    I  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGTIETAEYRF-IEEKAPGIMARKSVHEPLQTGIKAIDALVPVGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           TL      +        I   +G++   V   ++          +++V A + +S  L+ 
Sbjct: 179 TLAIDTIINQKGQDVVCIYVAIGQKQSTVAATVKKLEEHGALDYTIIVNAGASDSAALQF 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   VT+AEYF   G + ++  D +++ A + RE++      P    YP  VF    R
Sbjct: 239 LAPYAGVTMAEYFRDNGRHAVIFYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSR 298

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G+ITA   +     +    I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERAAKLSDELGAGSITAFPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   +  F E +       +   +D      + + 
Sbjct: 359 INVGLSVSRVGGAAQIKAIKQVSGTLRLDLASFRELQ---AFAQFASDLDDYTRSQLERG 415

Query: 411 PIIYDFLKQSP 421
             + + LKQ P
Sbjct: 416 QRMVEVLKQGP 426


>gi|325688347|gb|EGD30366.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis SK72]
 gi|332361634|gb|EGJ39438.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK1056]
          Length = 501

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDKAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|6561620|gb|AAF16964.1|AF197632_1 ATPase alpha subunit [Houttuynia cordata]
          Length = 418

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 174/411 (42%), Gaps = 23/411 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ ++  L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDAAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  SL   + ++ E   +     +   +D +    + +   + + LKQ+ 
Sbjct: 356 QVCGSLKLELAQYRE---VAAFAQFGSDLDAVTQALLQRGARLTEVLKQAQ 403


>gi|238650823|ref|YP_002916678.1| F0F1 ATP synthase subunit alpha [Rickettsia peacockii str. Rustic]
 gi|259585435|sp|C4K229|ATPA_RICPU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|238624921|gb|ACR47627.1| F0F1 ATP synthase subunit alpha [Rickettsia peacockii str. Rustic]
          Length = 510

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 184/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPVGKALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     + KG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEAKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKVQ 417

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+       E+    I
Sbjct: 418 IDHGKRLVEILKQAQYHPFPVEEQIVSI 445


>gi|164685638|gb|ABY66765.1| atp1 [Scaevola plumieri]
          Length = 413

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L+  +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLN-AIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSKSASESETLHCVYVAIGQ 175

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     D ++ S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEADAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|297584038|ref|YP_003699818.1| flagellar protein export ATPase FliI [Bacillus selenitireducens
           MLS10]
 gi|297142495|gb|ADH99252.1| flagellar protein export ATPase FliI [Bacillus selenitireducens
           MLS10]
          Length = 434

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 242/419 (57%), Gaps = 14/419 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G +S +  +   +        +G+  +          L +V+    + V + P     +I
Sbjct: 20  GKVSQVVGLM--IESRGPQASVGELCLIHISRTQRKILAEVVGFREEKVLLMPFDRISDI 77

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGK-PIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           + G LV   GR   +       G V++ LG+  +DG + +  G+      ++ P  M R 
Sbjct: 78  AAGSLVETMGRPLEVKVGRDMIGTVVDGLGRHFLDGGERI--GNQYYSTDNEPPNPMTRP 135

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +    G++ ID    +  GQR+G+FAGSG+GKSTL++M  +S   D  +I+L+GERG
Sbjct: 136 RISEPLGLGVKAIDGLFTVGKGQRMGIFAGSGVGKSTLMAMITKSSEADINVIALIGERG 195

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVR+FI  D   + +K ++VVVATSD+ P++R    +TA  I+EYF   G +V L++DS
Sbjct: 196 REVRDFIERDLGEEGMKNTIVVVATSDQPPLMRIKGAMTATAISEYFRDLGYDVNLMMDS 255

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR A + REI    GE P  +GY  SVF+ LPRLLER G S+   G+ITA  +VLVDGD
Sbjct: 256 VTRVAMAQREIGLAIGEPPTTKGYTPSVFALLPRLLERSGMSQS--GSITAFYTVLVDGD 313

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+ADSVR ILDGH+VL+R LA +G +P ++PL+S+SR+ ++      ++    +  
Sbjct: 314 DMNEPVADSVRGILDGHLVLDRKLANKGHFPAINPLSSISRIMNELVDDRHRQAADKVRQ 373

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +I  ++E+ D+  IG Y+ G +  +D+A+ + P + +FL Q   +  S D   EI  +L
Sbjct: 374 IISTYQESEDLINIGAYKKGSNPEVDEAIKRFPEVNEFLVQEVHEAFSYD---EIMNQL 429


>gi|114404|sp|P18260|ATPAM_HELAN RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|12986|emb|CAA39428.1| F1 ATPase [Helianthus annuus]
 gi|12989|emb|CAA37022.1| unnamed protein product [Helianthus annuus]
 gi|758362|emb|CAA37613.1| F1 ATPase [Helianthus annuus]
          Length = 510

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 173/439 (39%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATS 224
           +      +                 +   +G++   V + ++     N    S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANAMEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VAALAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  KQ  
Sbjct: 417 TQALLNRGARLTEVPKQPQ 435


>gi|288817573|ref|YP_003431920.1| ATP synthase F1 alpha subunit [Hydrogenobacter thermophilus TK-6]
 gi|288786972|dbj|BAI68719.1| ATP synthase F1 alpha subunit [Hydrogenobacter thermophilus TK-6]
 gi|308751173|gb|ADO44656.1| ATP synthase F1, alpha subunit [Hydrogenobacter thermophilus TK-6]
          Length = 503

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/427 (24%), Positives = 176/427 (41%), Gaps = 15/427 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++ L+ L +  +D+     ++  G +  +         L   V   + V  +   S  +G
Sbjct: 7   EEALQLLREHIKDFEATARMEEIGVVYYVGDGVARAYGL-DNVMANELVEFE---SGVMG 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSL 119
               +  D V I  +G    I  G +V   GR           GRVI+ LG P+DG   +
Sbjct: 63  LAFNLEEDNVGIIILGSESGIKEGSVVRRTGRILDAPVGEGLIGRVIDPLGNPLDGKGPI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            K +    I    P  + R+ V +  +TGI+ ID   P+  GQR  +      G++T+  
Sbjct: 123 -KYEYRSPIEKIAPGVVKRKSVHEPLQTGIKAIDAMIPIGRGQRELIIGDRSTGRTTICI 181

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD-ESPILRKMAPL 236
            ++  + D     I   +G++       IE    +       VV  S  +   L+ +AP 
Sbjct: 182 DTILNQRDTDVYCIYVAIGQKRSTTARIIELLEKNGAMDYTCVVVASATDPASLQYLAPF 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              TI EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 VGCTIGEYFRDNGKHALVIYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++  
Sbjct: 302 AAKLNDELGAGSLTALPIIETKAGDVAAYIPTNVISITDGQIYLEPDLFNKGVRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  +L   + +F E         +   +D    + +++   + 
Sbjct: 362 LSVSRVGGAAQIKAMKQVAGTLRLDLAQFRELE---AFVQFAAELDKATQQTINRGLRLV 418

Query: 415 DFLKQSP 421
           + LKQ P
Sbjct: 419 ELLKQEP 425


>gi|229587165|ref|YP_002845666.1| F0F1 ATP synthase subunit alpha [Rickettsia africae ESF-5]
 gi|228022215|gb|ACP53923.1| ATP synthase alpha chain [Rickettsia africae ESF-5]
          Length = 533

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 185/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 35  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 84

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 85  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGKALLGRVVDALGNPIDGKGDI 144

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 145 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 203

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 204 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 263

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 264 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 323

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 324 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 383

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 384 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDSATKAQ 440

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+       E+    I
Sbjct: 441 IDHGKRLVEILKQAQYHPFPVEEQIVSI 468


>gi|145301459|ref|YP_001144298.1| type III secretion system ATPase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|38201225|emb|CAD56760.1| ascN protein [Aeromonas salmonicida subsp. salmonicida]
 gi|66947962|emb|CAE83099.1| AscN protein [Aeromonas salmonicida subsp. salmonicida]
 gi|142856341|gb|ABO92550.1| AscN protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|145284342|gb|ABP51923.1| AscN [Aeromonas veronii bv. sobria]
          Length = 445

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 158/443 (35%), Positives = 237/443 (53%), Gaps = 11/443 (2%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-- 56
           M  +L+ +            L+   G ++ +T        +   V +G+    +  ++  
Sbjct: 6   MTLSLDHIPDQLRHAIDECRLIQIRGRVTQVTGTLLK--AVVPGVRIGELCHLRNPDNTL 63

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
               +VI        + P+G    IS    V   G   ++       G+V++ LG P  G
Sbjct: 64  SLQAEVIGFAQHQALLTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPF-G 122

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L + +    +    P  M+R+R+ +    GIR ID       GQR+G+FA +G GKS
Sbjct: 123 GGHLPEPEAWYPVYRDAPAPMSRKRIAEPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           TLL+   RS   D  +++L+GERGREVREFIE D   + LKK+V+VVATSD   + R  A
Sbjct: 183 TLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+
Sbjct: 243 GFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLM 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L
Sbjct: 303 ERAGQSDK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVL 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+ ++    + +     L   + ++EE   +  IG Y+ G D + D+A+ ++  I 
Sbjct: 361 RSASRVMNQIIEPEHQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIETIR 420

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            +L+Q   + SS        + L
Sbjct: 421 QWLRQGTHEPSSLPEALSTLEAL 443


>gi|32265926|ref|NP_859958.1| F0F1 ATP synthase subunit alpha [Helicobacter hepaticus ATCC 51449]
 gi|81666299|sp|Q7VJ23|ATPA_HELHP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|32261975|gb|AAP77024.1| FoF1-type ATP synthase [Helicobacter hepaticus ATCC 51449]
          Length = 504

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+++ N+ + + G + +       V  L+  V   + V     ++   G    
Sbjct: 12  SIIKERIENFNINIDISETGKVIAYADGVAKVYGLN-NVMYYEMVEFDTGDT---GIAFN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  I  G  V    +  ++       GRVIN LG+PIDG  ++   +
Sbjct: 68  LEESSVGVVVLGSGRTIKEGTSVKRLKKLMKVPVGDAIVGRVINTLGEPIDGKGAIEANE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+      
Sbjct: 128 YRF-VEEKAPGIMARKSVHQPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTII 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   VG++   V + +           +VVV A +  S  ++ +AP T VT
Sbjct: 187 NQKGQDVICIYVAVGQKESTVAQVVRKLEEHGAMDYTVVVNAPASFSAAMQFLAPYTGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF     + L+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 247 IGEYFRDNARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     +    I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 307 NDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E +       +   +D    K + +   + + LK
Sbjct: 367 RVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFSQFASDLDESSRKQLERGQRMVEILK 423

Query: 419 QSPSDLSS 426
           Q P    S
Sbjct: 424 QPPYSPLS 431


>gi|322385221|ref|ZP_08058868.1| ATP synthase F1 sector alpha subunit [Streptococcus cristatus ATCC
           51100]
 gi|321270845|gb|EFX53758.1| ATP synthase F1 sector alpha subunit [Streptococcus cristatus ATCC
           51100]
          Length = 501

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 183/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L   +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDNAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   L
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDALIGRVVDPLGRPVDGLGEL 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ATTK-TRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPVHEPLPVE 431


>gi|242310680|ref|ZP_04809835.1| ATP synthase subunit alpha [Helicobacter pullorum MIT 98-5489]
 gi|239523078|gb|EEQ62944.1| ATP synthase subunit alpha [Helicobacter pullorum MIT 98-5489]
          Length = 504

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 101/431 (23%), Positives = 181/431 (41%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++   N      + Q G + +       V  L   +   + V     + 
Sbjct: 4   KLQADEISSIIKERIDNFELDLNIAQTGKVIAYADGVAKVYGLKDAMSY-EMVEFDTGDK 62

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G    +    V +  +G G+EI  G  V   G+  R+       GRV+NALG+PIDG
Sbjct: 63  ---GLASSLEEGSVGVVVLGAGKEIKEGTSVKRLGKLLRVPVGDDLMGRVVNALGEPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +    +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGAIEAKEYRF-MEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +        I   +G++   V + +           +++V A + +S  ++ 
Sbjct: 179 TVAIDTIINQKGQDVVCIYVAIGQKESTVAQVVRKLEEHGAMEYTIIVNAPASDSAAMQY 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   VT+ EYF   G + L++ D +++ A + RE++      P    +P  VF    R
Sbjct: 239 LAPYAGVTMGEYFRDNGRHALIVYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSR 298

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     +    I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERAAKVSDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 359 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDETSRKQLDRG 415

Query: 411 PIIYDFLKQSP 421
             + + LKQ P
Sbjct: 416 QRMVEVLKQPP 426


>gi|219123736|ref|XP_002182175.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406136|gb|EEC46076.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 509

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 101/434 (23%), Positives = 177/434 (40%), Gaps = 20/434 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           AED  K    + G + S+      V  LS  V  G+ VV         G  + +  D V 
Sbjct: 22  AEDSGKKYA-ETGSVISVGDGIARVYGLS-NVQAGEMVVFSAG---LRGMALNLEEDNVG 76

Query: 72  ICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           +   G   +I  GD V   G    +       GRV++ +G+PIDG  SL K   S     
Sbjct: 77  VVIFGDDRDILEGDTVKRTGAIVDVPVGNELLGRVVDGIGQPIDGGASLEKCKRSRA-EV 135

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK- 189
           K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ +      +      
Sbjct: 136 KAPGIIPRESVSEPMLTGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKAE 195

Query: 190 ---VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYF 245
               I   VG++   + + +            ++V AT+ ++  L+ +AP T   + E+F
Sbjct: 196 PLACIYVGVGQKRSTIAQLVGQLDERGAMDNCIIVAATASDAAPLQFLAPYTGAAMGEFF 255

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS--EKE 303
              G + ++  D +++ A + R+++      P    YP  VF    RLLER         
Sbjct: 256 RDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMHRNNG 315

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +     + +  I  +V SI DG I L   L  +G+ P +    SVSR+   
Sbjct: 316 GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRVGSA 375

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           A     K +  ++   + ++ E   +     +   +D    + +++   +Y+ LKQ    
Sbjct: 376 AQYKATKAVAGTMKLELAQYRE---VAAFAKFGSDLDPATQQQLNRGVRLYELLKQGQYQ 432

Query: 424 LSSEDVFQEITKKL 437
                  +E+   L
Sbjct: 433 PYEP---EEVVAAL 443


>gi|213517431|gb|ACJ50137.1| ATP synthase CF1 alpha subunit [Chlamydomonas reinhardtii]
          Length = 508

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 180/428 (42%), Gaps = 15/428 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +  L E Y+  +  V  G +  +      +  L + +  G+ +  +      LG  + + 
Sbjct: 13  IKDLIEQYTPEVKMVDFGIVFQVGDGIARIYGLEKAMS-GELLEFEDG---TLGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +G G +I+ G  V   G+   I     + GRV++ L +P+DG  ++   D S
Sbjct: 69  ANNVGAVLLGDGLKITEGSRVRCTGKIAEIPVGEAYLGRVVDGLARPVDGKGAVQTKD-S 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
             I S  P  + R+ V +   TG+  +D   P+  GQR  +      GK+ +   ++  +
Sbjct: 128 RAIESPAPGIVARRSVYEPLATGLVAVDAMIPVGRGQRELIIGDRQTGKTAIAVDTILNQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           +++V+A ++E   L+ +AP T  T+A
Sbjct: 188 KGKGVICVYVAIGQKASSVAQVLNTLKERGALDYTIIVMANANEPATLQYLAPYTGATLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G   L I D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYTGRPTLTIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNN 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 308 ALGEGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLAAGLFNSGLRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGARLREILKQP 424

Query: 421 PSDLSSED 428
            S   S +
Sbjct: 425 QSSPLSVE 432


>gi|259486849|tpe|CBF85040.1| TPA: ATP synthase alpha chain, mitochondrial precursor (Broad)
           [Aspergillus nidulans FGSC A4]
          Length = 556

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/415 (23%), Positives = 176/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +     S     K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPINASTKSRA-QLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 187 SVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNTSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CIYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + +++ D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 307 GRHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDKHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGQRLTELLKQKQ 478


>gi|168822285|ref|ZP_02834285.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205341351|gb|EDZ28115.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
          Length = 433

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 160/416 (38%), Positives = 229/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TI E+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTITEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDAYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|239996426|ref|ZP_04716950.1| flagellum-specific ATP synthase [Alteromonas macleodii ATCC 27126]
          Length = 444

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 151/435 (34%), Positives = 229/435 (52%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
                 L +  +   VV  G +  +  +  T+  +   + +G   + Q    +   +V+ 
Sbjct: 6   HAHFESLTKQVTSPPVVAAGKL--VRGIGLTLEAVGCQLPVGSQCLVQTIEGEIEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
              DI Y+ P      I  G  V    R   +       GRV++  G+P+DG   +   +
Sbjct: 64  FGDDITYLMPTEAVRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDGLGEIN-AE 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       + R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 123 ARAPTTRPPMNPLIRRPINTPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTR 182

Query: 184 SDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D V++ LVGERGREV+EFI +    +  +++VVV A +D SP++R     TAVTIA
Sbjct: 183 GCEADVVVVGLVGERGREVKEFIHEILTEEERQRAVVVAAPADTSPLMRLKGCETAVTIA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG  VLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G   +
Sbjct: 243 EYFRDKGMKVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSE 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LA+ G YP +D  AS+SR+  
Sbjct: 303 RQGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMP 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S + + +   +  +   +++ +D+  IG Y  G D  +D A+   P I   L+Q   
Sbjct: 363 MVVSEEHQLMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINALLQQGMK 422

Query: 423 DLSSEDVFQEITKKL 437
            +   D   E    L
Sbjct: 423 QVIPYDESLEGMAAL 437


>gi|331001482|ref|ZP_08325100.1| ATP synthase F1, alpha subunit [Parasutterella excrementihominis
           YIT 11859]
 gi|329568211|gb|EGG50028.1| ATP synthase F1, alpha subunit [Parasutterella excrementihominis
           YIT 11859]
          Length = 513

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 105/446 (23%), Positives = 188/446 (42%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + +     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKQRIEGMGLNTNLRTEGTVVSVTDGICRVHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    I+ GD+V   GR  ++       GRV+NALG+PID
Sbjct: 58  -NTYGLALNLERDSVGAVILGDYTHITEGDIVKTTGRILQVPVGPALKGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + +    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIETTEFDV-VEKVAPGVIERQSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLTCIYVAIGQKASTIANVVRKLEEYGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGATMGEYFRDRGEDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVNPEYVERFTKGAVKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINPGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +  I+ + +KQ     
Sbjct: 413 LDEATRKQLERGRIVTELMKQDQYQP 438


>gi|327458647|gb|EGF04995.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK1057]
          Length = 501

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDKAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQNMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|303256391|ref|ZP_07342405.1| ATP synthase F1, alpha subunit [Burkholderiales bacterium 1_1_47]
 gi|302859882|gb|EFL82959.1| ATP synthase F1, alpha subunit [Burkholderiales bacterium 1_1_47]
          Length = 513

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 105/446 (23%), Positives = 188/446 (42%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + +     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKQRIEGMGLNTNLRTEGTVVSVTDGICRVHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    I+ GD+V   GR  ++       GRV+NALG+PID
Sbjct: 58  -NTYGLALNLERDSVGAVILGDYTHITEGDIVKTTGRILQVPVGPALKGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + +    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIETTEFDV-VEKVAPGVIERQSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +         + ++VV A++ ES  ++
Sbjct: 176 TAVAIDTIINQKGKDLTCIYVAIGQKASTIANVVRKLEEYGALEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGATMGEYFRDRGEDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVNPEYVERFTKGAVKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINPGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +  I+ + +KQ     
Sbjct: 413 LDEATRKQLERGRIVTELMKQDQYQP 438


>gi|292493906|ref|YP_003529345.1| ATP synthase F1 subunit alpha [Nitrosococcus halophilus Nc4]
 gi|291582501|gb|ADE16958.1| ATP synthase F1, alpha subunit [Nitrosococcus halophilus Nc4]
          Length = 515

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/448 (23%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +Q N   +++L     +           G + S+T     V  L+  V  G+ +   G  
Sbjct: 3   LQLNAAEISELIRKRIEGFEAKVEARTEGTVVSVTDGIVRVHGLAD-VMFGEMIEFPG-- 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  + IS GD V   GR   +       GRV+++LG PID
Sbjct: 60  -NTYGLAMNLERDSVGAVVLGPYQHISEGDRVKCTGRILEVPVGEALLGRVVDSLGIPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + + +  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 119 GGGPI-EAEATSPIEKVAPGVITRQSVSQPVQTGLKAIDSMVPIGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   +         + +++V A + ES  L+
Sbjct: 178 TAVAVDTIINQRGTGIKCIYVAIGQKASSVAGVVRKLEEHGALEHTIIVAANASESAALQ 237

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +T+ A + R+++      P    +P  VF    
Sbjct: 238 FIAPYAGCAMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAFPGDVFYLHS 297

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  I  +V SI DG I L
Sbjct: 298 RLLERAARVNAEQVEKLTDGEVKGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFL 357

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 358 ETDLFNAGIRPAINAGLSVSRVGGSAQTKIIKKLGGGVRLDLAQYRE---LAAFAQFASD 414

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ+     S
Sbjct: 415 LDEATRKQLERGQRVTELMKQTQYSPMS 442


>gi|34539261|gb|AAQ74514.1| F1-ATPase alpha subunit [Cochliostema odoratissimum]
          Length = 417

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 401


>gi|70725931|ref|YP_252845.1| F0F1 ATP synthase subunit alpha [Staphylococcus haemolyticus
           JCSC1435]
 gi|124007216|sp|Q4L7Y6|ATPA_STAHJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|68446655|dbj|BAE04239.1| ATP synthase alpha chain [Staphylococcus haemolyticus JCSC1435]
          Length = 502

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+     G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-CMAGELVEFSNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   EI+ GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYTEITEGDEVRRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +  K    M R+ V++  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 126 -TRPVEQKATGVMARKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIGIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKGLDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASASEPSPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTARKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|161723840|ref|NP_360874.2| F0F1 ATP synthase subunit alpha [Rickettsia conorii str. Malish 7]
 gi|20137393|sp|Q92G86|ATPA_RICCN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 510

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 105/435 (24%), Positives = 182/435 (41%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGKALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 417

Query: 407 VHQVPIIYDFLKQSP 421
           +     + + LKQ+ 
Sbjct: 418 IDHGKRLVEILKQAQ 432


>gi|319404808|emb|CBI78409.1| ATP synthase alpha chain [Bartonella rochalimae ATCC BAA-1498]
          Length = 478

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 166/409 (40%), Gaps = 24/409 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L   V  G+ V          G  + +  D V I   G   +I  GD V  
Sbjct: 2   GDGIARVYGL-DNVQAGEMVAFSNG---VQGMALNLETDNVGIVIFGSDRDIHEGDTVKR 57

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG   + K      +  K P  + RQ V +   TG
Sbjct: 58  LGAIVDVPVGPALLGRVVDALGNPIDGKGPI-KAKERRRVDVKAPGIIPRQSVHEPMSTG 116

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------------VIISLVG 196
           ++VID   P+  GQR  V      GK+ +L     +                  I   +G
Sbjct: 117 LKVIDALIPIGRGQRELVIGDRQTGKTAILLDTFLNQKHFHDNDTEEDQDRVYCIYVAIG 176

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V +F++          S++V AT+ +   ++ +APL    + EYF   G + L+ 
Sbjct: 177 QKRSTVAQFVKVLEERGALDYSIIVAATASDPAPMQFIAPLAGCAMGEYFRDNGQHALIG 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI--TAVISV 313
            D +++ A + R+++      P    YP  VF    RLLER      + G+   TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADYGSGSLTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
               ++ +  I  +V SI DG I L  +L  +G  P V+   SVSR+   A     K++ 
Sbjct: 297 ETQANDVSAYIPTNVISITDGQIFLETNLFYQGIRPAVNVGLSVSRVGSAAQIKAMKQVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            S+   + ++ E   +     +   +D      +++   + + LKQ   
Sbjct: 357 GSIKGELAQYRE---MAAFAQFGSDLDASTQHLLNRGACLTELLKQLQF 402


>gi|164685668|gb|ABY66780.1| atp1 [Epifagus virginiana]
          Length = 413

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 170/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKEVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|284041512|ref|YP_003391852.1| flagellar protein export ATPase FliI [Conexibacter woesei DSM
           14684]
 gi|283945733|gb|ADB48477.1| flagellar protein export ATPase FliI [Conexibacter woesei DSM
           14684]
          Length = 489

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 171/423 (40%), Positives = 241/423 (56%), Gaps = 8/423 (1%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYI 72
            + +L  + G +S +  +    T L     +G+  +  G         +V+        +
Sbjct: 28  RASDLARRHGRVSDLIGLVVEATGL--QAEVGEICMVNGDRGHPPVPAEVVGFRGARTLL 85

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P+G    I         G  FRI       GRVI+ LGKPIDG      G       + 
Sbjct: 86  MPLGEMHGIGPATTTRATGTPFRIRVGQDLLGRVIDGLGKPIDGMPRATNG-HPRSTNAS 144

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  ++R R+++    G+R +D   P   GQR+G+FAGSG+GKS+LL M ARS   D  +
Sbjct: 145 PPDPLDRPRIDQRVDLGVRALDALVPCGRGQRLGIFAGSGVGKSSLLGMIARSTTADVNV 204

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           I+LVGERGREV+EF+E  LGD L +SVVVVATSD+  ++R  A  TA  IAE+F  +G++
Sbjct: 205 IALVGERGREVKEFVERDLGDALSRSVVVVATSDQPALVRIKAAFTATAIAEHFRDQGND 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L++DS+TRFA + RE+    GE P  RGY  SVF++LPRLLER G +    G+IT + 
Sbjct: 265 VMLMMDSVTRFAMAQREVGLAIGEPPATRGYTPSVFAQLPRLLERSGTART--GSITGLY 322

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ N+PIAD+VRSILDGH+VL R LA    YP +D L SVSRL  +  S + + 
Sbjct: 323 TVLVDGDDMNEPIADAVRSILDGHVVLTRELAHASHYPAIDVLQSVSRLVGEIVSPEVRA 382

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
              ++  L+  ++E  D+  IG Y+ G D  +D A+   P +  FLKQ P + SS     
Sbjct: 383 AGQAVRQLMASYKEKEDLIAIGAYQGGTDPTVDAAIALRPQLDRFLKQRPDEKSSAAEAD 442

Query: 432 EIT 434
           E+ 
Sbjct: 443 ELL 445


>gi|323352616|ref|ZP_08087586.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           VMC66]
 gi|322121652|gb|EFX93398.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           VMC66]
 gi|324990542|gb|EGC22478.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK353]
 gi|325693991|gb|EGD35909.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK150]
 gi|325696689|gb|EGD38577.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK160]
 gi|327461559|gb|EGF07890.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis SK1]
 gi|327468902|gb|EGF14374.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK330]
 gi|327473283|gb|EGF18703.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK408]
 gi|327489413|gb|EGF21206.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK1058]
 gi|328945465|gb|EGG39616.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK1087]
 gi|332362654|gb|EGJ40452.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis SK49]
 gi|332365948|gb|EGJ43704.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK1059]
          Length = 501

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDKAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|34539395|gb|AAQ74581.1| F1-ATPase alpha subunit [Palisota bracteosa]
          Length = 415

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 171/406 (42%), Gaps = 20/406 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTTIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--------KVIISLVGER 198
           TG++ +D   P+  GQR  +      GK+ +      +              +   +G++
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMGTSESETLYCVYVAIGQK 176

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     +  + S++V AT+ +   L+ +AP +   + EYF   G + L++ D
Sbjct: 177 RSTVAQLVQILSEAHALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIVYD 236

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 237 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 296

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 297 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGS 356

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|257452843|ref|ZP_05618142.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. 3_1_5R]
 gi|317059384|ref|ZP_07923869.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. 3_1_5R]
 gi|313685060|gb|EFS21895.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. 3_1_5R]
          Length = 500

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E + +  E+Y K+L V   G +  +      +  LS  V   + +         +G  + 
Sbjct: 10  EIIKKEIENYKKSLDVKTSGTVLEVGDGIARIYGLS-SVMSNELLEFPNG---VMGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G    I  GD V   GR    P      GRV+NALG+ +DG   +    
Sbjct: 66  LEENNVGAVILGNASLIKEGDGVKATGRVVSVPAGEGMLGRVVNALGEAVDGKGEIRPSK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K    ++RQ V +  +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 126 Y-MPVERKASGIISRQPVFEPLQTGLKSIDGMVPIGRGQRELIIGDRQTGKTAIALDAII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +  K I   +G++   + +  +          + +V AT+ E+  L+ +AP + V 
Sbjct: 185 NQKGNGVKCIYVAIGQKRSTIAQIFQKLEDAGAMEYTTIVAATASEAAPLQYLAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  KG++VL+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEYFMDKGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 SPELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETQLFNSGFRPAINAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ S +   + ++ E   +     +   +D      + +   I + LK
Sbjct: 365 RVGGAAQIKAMKQVASKVKLELAQYNE---LLTFAQFGSDLDKATKAQLDRGNRIMEVLK 421

Query: 419 QSP 421
           Q+ 
Sbjct: 422 QAQ 424


>gi|149194683|ref|ZP_01871778.1| flagellum-specific ATP synthase [Caminibacter mediatlanticus TB-2]
 gi|149135106|gb|EDM23587.1| flagellum-specific ATP synthase [Caminibacter mediatlanticus TB-2]
          Length = 430

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 159/411 (38%), Positives = 231/411 (56%), Gaps = 7/411 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           +   K L    G+I  I       T L+  V  GD V  +  N   LG V  +  +   I
Sbjct: 8   KIKQKPLSKPYGFIKKINPTNIIATGLNPSV--GDIVEIKS-NIPTLGMVTSVMENEFII 64

Query: 73  CPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P    E + +GD V+      ++       GRV++   +PIDG   + K +    IM K
Sbjct: 65  TPFSFVEGMKIGDRVYIDEEGMKVPVGEGLLGRVVDPFLRPIDGKGEI-KYETKYPIMRK 123

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R  + + F TG++ ID       GQ++G+FAGSG+GKSTL+SM  R    D  +
Sbjct: 124 PISPLQRGVINEVFPTGVKAIDGLLTCGKGQKLGIFAGSGVGKSTLMSMIVRGSESDIKV 183

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           I+L+GERGRE+ EFIE  L  +L  +V++VATSD+S ++RK    +A+ +AEYF  K  +
Sbjct: 184 IALIGERGREIPEFIEHNLKGDLTNTVIIVATSDDSALMRKYGAFSAMAVAEYFKDKNKD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL ++DS+TRFA + REI    GE P ++GYP S    LP+L+ER G  EK KG+ITA  
Sbjct: 244 VLFLMDSVTRFAMAQREIGLAMGEPPTSKGYPPSAIMLLPQLMERAGK-EKNKGSITAFF 302

Query: 312 SVLVDGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
           +VLV+GD+ + DPIAD  RSILDGHI+L+R L + G YPP++ L S SR+ +   + +  
Sbjct: 303 TVLVEGDDTSADPIADQARSILDGHILLDRELTDFGIYPPINILKSASRVMNNIVTPEHL 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +       L    +E   +  IG Y+ G D  LD+A+ +   + +FLKQ P
Sbjct: 363 QKAQKFKKLYALLKENEVLIRIGAYQKGTDPELDEAIAKKEAMEEFLKQPP 413


>gi|116512625|ref|YP_811532.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123025240|sp|Q02XA3|ATPA_LACLS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116108279|gb|ABJ73419.1| ATP synthase F1 subcomplex alpha subunit [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 500

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+++ +  V + G ++ +         L +    G+ V         LG    
Sbjct: 10  SLIKKQIENFTPDFEVAETGVVTYVGDGIARAYGL-ENAMSGELVEFSNG---VLGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G    I  GD V   G+   I       GRV+N LG+P+DG   L  G 
Sbjct: 66  LDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTGK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++      
Sbjct: 126 -TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E     D +  ++VV A++ +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKESTVRTQVETLRKLDAMDYTIVVTASASQPSPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +SVS
Sbjct: 305 SDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDEATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|260892010|ref|YP_003238107.1| ATP synthase F1, alpha subunit [Ammonifex degensii KC4]
 gi|260864151|gb|ACX51257.1| ATP synthase F1, alpha subunit [Ammonifex degensii KC4]
          Length = 507

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 172/432 (39%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     +   VQ      G +  I      V  L +     + +   G  
Sbjct: 1   MKLRPEEISSIIRQQIEKYEVQVEVADVGTVIYIGDGVARVYGL-EDCMYSELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V    +G    I  GD+V   GR   +       GRVIN +G P+D
Sbjct: 59  --VYGMALNLEEDNVGAVILGPYTHIKEGDVVKRTGRIASVPVGEELIGRVINPVGMPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K      I    P  + R+ V    +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KSQKFRPIERIAPGVIYREPVNTPVQTGIKAIDSMIPIGRGQRELILGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   IE +        +VVVVAT+ +   L 
Sbjct: 176 TAIAVDTIINQKGQNMICIYVAIGQKASTVANVIEKFREYGAMDYTVVVVATASDPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I E F  +G +VL++ D +++ A + RE++      P    YP  +F+   
Sbjct: 236 YIAPFAGCAIGEEFMEQGKDVLIVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFNLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKLHPNYGGGSLTALPIIETQQGDVSAYIPTNVISITDGQIYLEPDLFYAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+  KA     +++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGKAQRKCMRQVAGRLRLDLAQYRE---LAAFAQFGTDLDKATLARLRR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GERLTELLKQDQ 424


>gi|326315348|ref|YP_004233020.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|89111182|dbj|BAE80271.1| HrcN [Acidovorax avenae subsp. avenae]
 gi|323372184|gb|ADX44453.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 442

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 156/430 (36%), Positives = 235/430 (54%), Gaps = 13/430 (3%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +  LV + G ++ +      V  L     LG+      +  + L   +V+      
Sbjct: 16  REIAAAPLVRRSGKVAEVIGTLMRVNGLD--AKLGELCHVLDERGELLQAAEVVGFANGQ 73

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +  G  V   G    +       GRVI++LG+PIDG   L   + +  +
Sbjct: 74  SILSPFGSILGVRGGSPVVGLGEVLSVPVGPRLLGRVIDSLGQPIDGKGPLDCSE-TRPV 132

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  M R+ +E    TG++ ID    L  GQR+G+FA +G+GKSTL+ M AR    D
Sbjct: 133 FALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQRMGIFAPAGVGKSTLMGMLARGTQCD 192

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREF+      + + +SVVV ATSD S   R  A   A  +AEY+  
Sbjct: 193 VSVIALIGERGREVREFVEFILGEEGMARSVVVCATSDRSSSERAKAAHVATAVAEYYRD 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+E+PRLLER G     +G+I
Sbjct: 253 QGLKVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSVFAEIPRLLERAGMGA--RGSI 310

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+ +VL + ++ NDPI++ VR ILDGH++L+R +A   +YP +D L S+SR+  +    
Sbjct: 311 TALYTVLYEDESGNDPISEEVRGILDGHMILSRKIAARNQYPAIDVLGSLSRVMSQIVPR 370

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL--- 424
           + ++       L+ ++EE   +  +G Y+PG D + D+A+ +   I  FL QS SDL   
Sbjct: 371 EHQQAGGRFRQLMAKYEEIEPLVQMGEYKPGNDPLADEAMEKHEEIRAFLNQSTSDLWDF 430

Query: 425 -SSEDVFQEI 433
             S D   +I
Sbjct: 431 GRSVDTLSDI 440


>gi|242371596|ref|ZP_04817170.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           M23864:W1]
 gi|242350663|gb|EES42264.1| F0F1 ATP synthase subunit alpha [Staphylococcus epidermidis
           M23864:W1]
          Length = 503

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 112/424 (26%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   EIS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYNEISEGDEVKRTGRIMEVPVGDELIGRVVNPLGQPIDGQGPINSTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDQPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYAGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDELGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAQKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|256848007|ref|ZP_05553451.1| ATP synthase F1, alpha subunit [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715067|gb|EEU30044.1| ATP synthase F1, alpha subunit [Lactobacillus coleohominis
           101-4-CHN]
          Length = 519

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 107/439 (24%), Positives = 177/439 (40%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +    N      V + G ++ +         L +    G+ +      
Sbjct: 1   MSIKTEEISSLIKKQLANYQDTISVEETGTVTYVGDGVARADGL-ENAMAGELLEFDNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G    I  GD V   GR   +       GRV++ LG+PID
Sbjct: 59  --VYGMAQNLESNNVGIVVLGDYTGIREGDTVKRTGRIMEVPVGDALLGRVVDPLGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D +  I  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK
Sbjct: 117 GLGEI-KTDKTRPIEKKAPDVMERKSVSEPLQTGIKVIDALVPIGRGQRELIIGDRKTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +   + ++  + D     I   +G++   VR  +E          ++VV A++     L 
Sbjct: 176 TSIAIDTIINQKDQDMICIYVAIGQKESTVRAAVETLRRYGALDYTIVVSASASNPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL+I D +++ A + RE++      P    YP  +F    
Sbjct: 236 YIAPYAGAAMGEEFMYNGRDVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I LN      G+ P
Sbjct: 296 RLLERAARLSDDLGGGSMTALPIIQTQAGDVSAYIPTNVISITDGQIFLNADSFYAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     KK+  +L   I  + E   +     +   +D      + +
Sbjct: 356 AIDAGTSVSRVGGDAQVKAMKKVSGTLRLDIASYNE---LASFAQFGSDLDAATQAKLAR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
                + LKQ        +
Sbjct: 413 GERTVEVLKQGLHQPQPVE 431


>gi|324993288|gb|EGC25208.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK405]
          Length = 501

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDKAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|90406816|ref|ZP_01215008.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3]
 gi|90312053|gb|EAS40146.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3]
          Length = 443

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 243/437 (55%), Gaps = 6/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M K  + LAQ     S       G +  +     T+  +     +G     + ++     
Sbjct: 1   MNKLGQRLAQYKTGESVTKPTVSGKLIRVVG--LTLEAIGCIAAVGSLCKVESQDGFIDA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +++ P      +  G  V     +  I       GRV++ +GKPIDG   +
Sbjct: 59  EVVGFSGERLFLMPSERLTGVLPGAKVIPQTHQQGIPVGMELLGRVLDGIGKPIDGKGDI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                S    + + P ++R+ + +    GI+ I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 119 VTAQTSNYTHASINP-LSRKAITEPLDVGIKAINALLTVGQGQRMGLFAGSGVGKSVLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIED LG+   K++VV+ A +D SP++R     T+
Sbjct: 178 MMTRGTNADVVVVGLIGERGREVKEFIEDILGEEGRKRAVVIAAPADASPLMRLKGCETS 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              + +G+I+A  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G +P +D   S+S
Sbjct: 298 NGNENQGSISAFFTVLTEGDDLQDPIADASRAILDGHIVLSRELADSGHFPAIDVGKSIS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S + + L   L    + ++E +++  IG Y  G D  +DKA+   P +  FL+
Sbjct: 358 RVMPMVTSEEHQTLARVLKQAYNLYQENKELITIGAYAKGSDPRIDKAIIIRPKLDHFLQ 417

Query: 419 QSPSD-LSSEDVFQEIT 434
           Q   + +S  D   ++ 
Sbjct: 418 QGMKESISYNDCLTQLA 434


>gi|89111149|dbj|BAE80239.1| HrcN [Acidovorax avenae subsp. avenae]
          Length = 442

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 156/430 (36%), Positives = 235/430 (54%), Gaps = 13/430 (3%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
            E  +  LV + G ++ +      V  L     LG+      +  + L   +V+      
Sbjct: 16  REIAAAPLVRRSGKVAEVIGTLMRVNGLD--AKLGELCHVLDERGELLQAAEVVGFANGQ 73

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G    +  G  V   G    +       GRVI++LG+PIDG   L   + +  +
Sbjct: 74  SILSPFGSILGVRGGSPVVGLGEVLSVPVGPRLLGRVIDSLGQPIDGKGPLDCSE-TRPV 132

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  M R+ +E    TG++ ID    L  GQR+G+FA +G+GKSTL+ M AR    D
Sbjct: 133 FALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQRMGIFAPAGVGKSTLMGMLARGTQCD 192

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREF+      + + +SVVV ATSD S   R  A   A  +AEY+  
Sbjct: 193 VSVIALIGERGREVREFVEFILGEEGMARSVVVCATSDRSSSERAKAAHVATAVAEYYRD 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+E+PRLLER G     +G+I
Sbjct: 253 QGLKVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSVFAEIPRLLERAGMGA--RGSI 310

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+ +VL + ++ NDPI++ VR ILDGH++L+R +A   +YP +D L S+SR+  +    
Sbjct: 311 TALYTVLYEDESGNDPISEEVRGILDGHMILSRKIAARNQYPAIDVLGSLSRVMSQIVPR 370

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL--- 424
           + ++       L+ ++EE   +  +G Y+PG D + D+A+ +   I  FL QS SDL   
Sbjct: 371 EHQQAGGRFRQLMAKYEEIEPLVQMGEYKPGNDPLADEAMEKHEEIRAFLNQSTSDLWDF 430

Query: 425 -SSEDVFQEI 433
             S D   +I
Sbjct: 431 GRSVDTLSDI 440


>gi|227890660|ref|ZP_04008465.1| F0F1 ATP synthase subunit alpha [Lactobacillus salivarius ATCC
           11741]
 gi|301299962|ref|ZP_07206189.1| ATP synthase F1, alpha subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|227867598|gb|EEJ75019.1| F0F1 ATP synthase subunit alpha [Lactobacillus salivarius ATCC
           11741]
 gi|300214398|gb|ADJ78814.1| ATP synthase subunit alpha (F-ATPase subunit alpha) (ATP synthase
           F1 sector subunit alpha) [Lactobacillus salivarius CECT
           5713]
 gi|300852444|gb|EFK80101.1| ATP synthase F1, alpha subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 503

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 172/419 (41%), Gaps = 14/419 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA    +  V + G ++ +         L   +  G+ V     +    G    +  + 
Sbjct: 15  QLANYQDELTVDEVGTVTYVGDGIARANGLDNALA-GELVEF---DDGTYGMAQNLESND 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + I  GD V   GR   +       GRV+N LG+PIDG   + K + +  +
Sbjct: 71  VGIIILGSFKGIREGDTVKRTGRIMEVPVGEELIGRVVNPLGQPIDGLGEI-KTNKTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDC 186
             K P  M RQ V +  +TG++ ID   P+  GQR  V      GK+   + ++  + D 
Sbjct: 130 ERKAPGVMERQSVTEPLQTGLKAIDALVPIGRGQRELVIGDRKTGKTSVAIDTIINQKDQ 189

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
               I   +G++   VR  +E       +  ++VV A       L  +AP     + E F
Sbjct: 190 DMICIYVAIGQKDSTVRTSVETLRKFGAMDYTIVVSAGPSSPAPLLYLAPYAGAAMGEEF 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
              G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E  
Sbjct: 250 MFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDELG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+   
Sbjct: 310 GGSMTALPFIETKAGDVSAYIPTNVISITDGQIFLDSDRFYSGIRPAIDAGTSVSRVGGN 369

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           A     KK+  +L   +  + E       G     +D      +++     + LKQ   
Sbjct: 370 AQVKAMKKVAGTLRTDLASYSELESFAQFG---SDLDEATQAKLNRGRRTVEVLKQPLH 425


>gi|254469066|ref|ZP_05082472.1| ATP synthase F1, alpha subunit [beta proteobacterium KB13]
 gi|207087876|gb|EDZ65159.1| ATP synthase F1, alpha subunit [beta proteobacterium KB13]
          Length = 513

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   +++L +   K+          G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLSTSEISELIKSRIKDFKSSSEARTQGTVVSVTDGIVRIHGLS-NVMSGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD     G+   +       GRV++ALG P+D
Sbjct: 58  -NTYGMALNLERDSVGAVVLGDYEHISEGDTCKCTGKILEVPVGPELVGRVVDALGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K  L+ +I    P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KSKLTDKIEKVAPGVIARKSVSQPVQTGLKSVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           + VVVA++ +S  L+
Sbjct: 176 TAVAVDAIINQKGQDMTCIYVAIGQKASTIANVVRKLEETGAMEYTTVVVASASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGEDSLIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVENFTKGKVKGKTGSLTALPVIETAAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +  +  + +KQ+     S
Sbjct: 413 LDEATRKQLDRGRMFTELMKQAQYSPLS 440


>gi|167464166|ref|ZP_02329255.1| flagellar protein export ATPase FliI [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322382300|ref|ZP_08056207.1| flagellum-specific ATP synthase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153653|gb|EFX46028.1| flagellum-specific ATP synthase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 439

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 163/441 (36%), Positives = 250/441 (56%), Gaps = 16/441 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NL 59
           QK +E L QL      + V   G ++ +     TV        +GD        SD    
Sbjct: 7   QKYIEHLQQL------DPVRVNGKVTQVIG--LTVESEGPDASIGDVCYIYPLKSDQPLK 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P+G  + I  G  V   G+   +       G+V++ LG+P+DG   
Sbjct: 59  AEVVGFRDNKVILMPLGELDSIGPGCDVVGTGKPLTVPVGHELLGKVLDGLGQPLDGS-F 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L          +     + R RV +    G++ ID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 118 LPSRMTQYSTNNSPNNPLQRPRVLEPLGVGVKCIDGLLTIGRGQRVGIFAGSGVGKSTLM 177

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+L+GERGREV +FI  D   + L +SVV+VATSD+  ++R    L 
Sbjct: 178 GMIARNTEADVNVIALIGERGREVLDFIERDLGPEGLARSVVIVATSDQPALIRIKGALI 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAEYF  +G NV+L++DS+TRFA + RE+    GE P  RGY  SVF+ LP+LLER 
Sbjct: 238 ATSIAEYFRDRGLNVMLMMDSVTRFAMAQREVGLAVGEPPATRGYTPSVFALLPKLLERS 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G     KG+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G YP +D L+SV
Sbjct: 298 GN--GPKGSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRNLAHKGHYPAIDVLSSV 355

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  S +++     L  L+  + ++ D+  +G Y+ G +  +D ++  +  I++F 
Sbjct: 356 SRVMKEIVSDEQQSAADQLKRLLAIYRDSEDLINLGAYQKGSNPDIDLSLQYIESIWEFT 415

Query: 418 KQSPSD-LSSEDVFQEITKKL 437
           +Q  +D ++ E   Q++ ++ 
Sbjct: 416 RQKTTDKVTIEQAKQQLIEQF 436


>gi|156144838|gb|ABU52980.1| ATP synthase subunit 1 [Silene acaulis]
          Length = 420

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTGIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNSKATSDSETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKEVCGSPKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQQQ 405


>gi|34539233|gb|AAQ74500.1| F1-ATPase alpha subunit [Callisia warszewicziana]
          Length = 418

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|299782956|gb|ADJ40954.1| ATP synthase subunit alpha [Lactobacillus fermentum CECT 5716]
          Length = 512

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 176/426 (41%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA    +  V + G ++ +         L +    G+ +  +       G    +  +
Sbjct: 14  KQLANYQDQISVEETGTVTYVGDGVARADGL-ENAMAGELLEFENG---VYGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G    I  GD V   GR   +       GRV++ LG+PIDG   + K D +  
Sbjct: 70  DVGIVILGDDTAIREGDTVKRTGRIMEVPVGDALLGRVVDPLGRPIDGLGDI-KTDKTRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSD 185
           I  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK+   + ++  + D
Sbjct: 129 IERKAPGVMERKSVSQPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSIAIDTIINQKD 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G++   VR  +E       L  ++VV A++     L  +AP     + E 
Sbjct: 189 QDMICIYVAIGQKESTVRSQVETLRKFGALDYTIVVSASASNPAPLLYIAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL+I D +++ A + RE++      P    YP  +F    RLLER      + 
Sbjct: 249 FMFGGRDVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G+ P +D   SVSR+  
Sbjct: 309 GGGSMTALPVIQTQAGDVSAYIPTNVISITDGQIFLDADSFYAGQRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   I  + E   +     +   +D      + +     + LKQ   
Sbjct: 369 DAQIKAMKKVSGTLRLDIASYNE---LAAFAQFGSDLDAATKARLDRGERTMEVLKQGLH 425

Query: 423 DLSSED 428
                +
Sbjct: 426 APQPVE 431


>gi|296805997|ref|XP_002843818.1| ATP synthase alpha subunit [Arthroderma otae CBS 113480]
 gi|238845120|gb|EEQ34782.1| ATP synthase alpha subunit [Arthroderma otae CBS 113480]
          Length = 555

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 22/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  +   V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGM-HNVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIKATEKRRA-QLKAPGILPRK 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK      T+L+    +   D      
Sbjct: 187 SVNQPVQTGMKCVDSMVPIGRGQRELIIGDRQTGKTAVALDTMLNQKRWNSSSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S++V AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIIVAATASEAAPLQYIAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER          G+
Sbjct: 307 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDNHKGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPIIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQL 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ     
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQP 481


>gi|85119497|ref|XP_965645.1| ATP synthase alpha chain, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|584806|sp|P37211|ATPA_NEUCR RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|168759|gb|AAA33560.1| mitochondrial ATPase alpha-subunit [Neurospora crassa]
 gi|28927457|gb|EAA36409.1| ATP synthase alpha chain, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 551

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 102/415 (24%), Positives = 175/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 67  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 122

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRVI+ALG PIDG   +   +       K P  + RQ
Sbjct: 123 VKEGETVKRTGEIVDVPVGPELLGRVIDALGNPIDGKGPINCKEKRRA-QLKAPGILPRQ 181

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    +   D      
Sbjct: 182 SVNQPVQTGLKSVDAMVPIGRGQRELIIGDRQTGKTAVALDAILNQKRWNSGSDEDKKLY 241

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + EYF   
Sbjct: 242 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGACVGEYFRDN 301

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +T+ A + R+++      P    YP  VF    RLLER     K    G+
Sbjct: 302 GKHSLVIFDDLTKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKTHGGGS 361

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 362 MTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGVRPAINVGLSVSRVGSAAQL 421

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 422 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQKQ 473


>gi|188992464|ref|YP_001904474.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734224|emb|CAP52432.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris]
          Length = 438

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 167/416 (40%), Positives = 239/416 (57%), Gaps = 9/416 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIG 78
            + G +  +      V  +   V LG+    + ++   L   +V+  +  +  + P G  
Sbjct: 19  RRYGKVVEVIGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRTLALLAPFGEL 76

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR   +   +   GRV++ LG+P DG   L  GD  ++I ++ P  M 
Sbjct: 77  VGLSRQTRVIGLGRPLAVPVGSALLGRVLDGLGEPADGQGPL-AGDDWVQIQAQAPDPMR 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D  +I L+GE
Sbjct: 136 RRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGE 195

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  +G  VLL++
Sbjct: 196 RGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGMRVLLMM 255

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+ITA  +VL +
Sbjct: 256 DSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGET--GSITAFYTVLAE 313

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            D  +DPIA+ VR ILDGH++L+R +A   +YP +D L S+SR+  +  SA++++    L
Sbjct: 314 DDTGSDPIAEEVRGILDGHLILSREIAARNQYPAIDVLGSLSRVMSQIVSAEQRQYAGQL 373

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             L+ +  E   +  +G YR G D + D+A+ ++  I DFL Q    LS  D   E
Sbjct: 374 RRLLAKHNEVETLLQVGEYRHGSDAVADEAIARIDAIRDFLSQPTDQLSDYDTILE 429


>gi|327441052|dbj|BAK17417.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Solibacillus silvestris StLB046]
          Length = 441

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 173/430 (40%), Positives = 249/430 (57%), Gaps = 13/430 (3%)

Query: 7   TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-----LG 60
            +AQL E     N   + G ++ +  +   +        +GD      + S N     L 
Sbjct: 2   KMAQLVEQIPNLNTFKKYGRVTRVVGLM--IESQGPESSIGDVCKIHIQTSKNGPQVMLA 59

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    +IV + P    +EIS+G LV   G    +       G+V++A+G P DG   L
Sbjct: 60  EVVGFKDEIVILMPYSSLKEISIGCLVEGTGSPLEVKVGPELIGKVLDAMGNPFDGQ-PL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG +++    + P  ++R  + +  + G++ ID    +  GQR+G+FAGSG+GKSTLL 
Sbjct: 119 PKGLMTVPTEKEPPNPLSRPPINEQLEVGVKAIDGMLTVGSGQRVGIFAGSGVGKSTLLG 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+LVGERGREVREFI  D   + L++SVVV ATSD+  ++R  A  TA
Sbjct: 179 MIARNTEADINVIALVGERGREVREFIERDLGPEGLQRSVVVAATSDQPALMRIKAAFTA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G NV+L++DS+TR A + REI    GE P  RGY  SVF+ LP LLER G
Sbjct: 239 TAIAEYFRDRGKNVMLMMDSVTRVAMAQREIGLAIGEPPATRGYTPSVFAILPTLLERSG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +    G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L SVS
Sbjct: 299 TNIN--GTITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRNLANKGQYPAINILKSVS 356

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL +     +  +  S L  L + + ++ D+  IG Y+ G    +D+A+   P+I +FLK
Sbjct: 357 RLMNHIAQPEHVRAASRLRELYYSYSKSEDLINIGAYKRGTSKEIDEAIMYEPLITEFLK 416

Query: 419 QSPSDLSSED 428
           Q   D  S D
Sbjct: 417 QGYKDKISID 426


>gi|314934174|ref|ZP_07841535.1| ATP synthase F1, alpha subunit [Staphylococcus caprae C87]
 gi|313653079|gb|EFS16840.1| ATP synthase F1, alpha subunit [Staphylococcus caprae C87]
          Length = 503

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLND-VMAGELVEFHNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   +IS GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYNDISEGDEVKRTGRIMEVPVGDELIGRVVNPLGQPIDGQGPINATK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   S+ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDSIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +E          ++VV A++ +   L  +AP + VT
Sbjct: 185 NQKDQDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAADPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDELGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK   +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKEAGTLRLDLASYRELESFAQFG---SDLDEFTAQKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|255767366|ref|NP_389506.2| flagellum-specific ATP synthase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|238054284|sp|P23445|FLII_BACSU RecName: Full=Flagellum-specific ATP synthase
 gi|225184993|emb|CAB13497.2| flagellar-specific ATPase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 438

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 160/421 (38%), Positives = 234/421 (55%), Gaps = 13/421 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD---NLGQVIRINLDIVYICPVGIG 78
           + G +  +  +   +        +GD  +   K         +V+    + + + P    
Sbjct: 18  RYGKVKRVIGLM--IESKGPASSIGDLCLIYAKGQSGKVIKAEVVGFQEENILLMPYLEA 75

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             I+ G +V   G   R+       G+VI+A G+P+DG   L KG   +      P  M 
Sbjct: 76  ASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LLPKGLSPVSTEQSPPNPMK 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGE
Sbjct: 135 RPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI +D   + LK+S+VVVATSD+  ++R  A  TA  IAEYF  KG NV+ ++
Sbjct: 195 RGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G +E   G ITA  +VLVD
Sbjct: 255 DSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANE--HGTITAFYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+     +       +  
Sbjct: 313 GDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVMSNISTKQHLDAANKF 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + +   + +E    
Sbjct: 373 RELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDEPA---LLEESIAA 429

Query: 437 L 437
           L
Sbjct: 430 L 430


>gi|326472094|gb|EGD96103.1| ATPase alpha subunit [Trichophyton tonsurans CBS 112818]
 gi|326477041|gb|EGE01051.1| ATPase alpha subunit [Trichophyton equinum CBS 127.97]
          Length = 555

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/418 (23%), Positives = 175/418 (41%), Gaps = 22/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  +   V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGM-HNVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIKAAEKRRA-QVKAPGILPRK 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK      T+L+    +   D      
Sbjct: 187 SVNQPVQTGMKCVDSMVPIGRGQRELIIGDRQTGKTAVALDTMLNQKRWNSSNDETKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER        + G+
Sbjct: 307 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDTHKGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQL 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ     
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQP 481


>gi|6561694|gb|AAF17038.1|AF197706_1 ATPase alpha subunit [Spathiphyllum wallisii]
          Length = 420

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +     +   +D +    +++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQYEP 408


>gi|28898442|ref|NP_798047.1| type III secretion system ATPase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365114|ref|ZP_05777685.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus K5030]
 gi|260876603|ref|ZP_05888958.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AN-5034]
 gi|260895036|ref|ZP_05903532.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus Peru-466]
 gi|28806659|dbj|BAC59931.1| ATP synthase in type III secretion system [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308085935|gb|EFO35630.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus Peru-466]
 gi|308093577|gb|EFO43272.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AN-5034]
 gi|308111730|gb|EFO49270.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus K5030]
          Length = 440

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 157/433 (36%), Positives = 233/433 (53%), Gaps = 12/433 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 11  QQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G++++ LG+P DG  S        
Sbjct: 69  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGKILDGLGRPFDGAQSQEPS-AWY 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 128 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAD 187

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   D + +SV+VVATSD   + R  A   A +IAEYF
Sbjct: 188 VDVTVLALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYF 247

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 248 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 306 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             D +   + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + S
Sbjct: 366 EPDHQAYAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPS 425

Query: 426 SEDVFQEITKKLQ 438
                +    +L+
Sbjct: 426 D---LEGAIAQLK 435


>gi|163802005|ref|ZP_02195901.1| type III secretion system ATPase [Vibrio sp. AND4]
 gi|159174146|gb|EDP58954.1| type III secretion system ATPase [Vibrio sp. AND4]
          Length = 440

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 153/422 (36%), Positives = 230/422 (54%), Gaps = 9/422 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRIN 66
            Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+   
Sbjct: 10  TQQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQ 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
                + P+G    IS    V   G+   +       G++++ LG+P DG  +  +    
Sbjct: 68  QHHALLTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGTQN-SEPTAW 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS 
Sbjct: 127 YPVYRDAPPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSA 186

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +++L+GERGREVREFI  D   + + KSV+VVATSD   + R  A   A +IAEY
Sbjct: 187 DVDVTVLALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEY 246

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  
Sbjct: 247 FRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK-- 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++ 
Sbjct: 305 GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQI 364

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I +FL+Q   + 
Sbjct: 365 VDKTHQASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIREFLRQGTHEP 424

Query: 425 SS 426
           S 
Sbjct: 425 SE 426


>gi|127512300|ref|YP_001093497.1| flagellum-specific ATP synthase [Shewanella loihica PV-4]
 gi|126637595|gb|ABO23238.1| flagellar protein export ATPase FliI [Shewanella loihica PV-4]
          Length = 446

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 156/435 (35%), Positives = 237/435 (54%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L+ L Q  +  +  +    G +  +  +    T       +G          D + +VI 
Sbjct: 9   LDKLRQHTQAVAPFMPEASGQLVRVVGLTLEATG--CKAPVGSLCSIATMAGDLIAEVIG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
            +  ++Y+ P+     +  G  V   G    ++      GRV++  G PIDG   L   D
Sbjct: 67  FDDKLLYLMPIEELSGVMPGAKVTPLGEQTGLNVGMGLLGRVLDGNGAPIDGLGQL-HTD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 + +   + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QKATRHATMLNPLARRAISEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG +   +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADVIVVGLVGERGREVKEFIEEILGAEGRSRSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGA 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  AS+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRALADSGHYPAIDVEASISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S    +    +  +   +++ RD+  IG Y  G D  +D A+   P +  FL+Q+  
Sbjct: 366 MVISDAHLEATRRVKQMYSLYQQNRDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQTMK 425

Query: 423 DLSSEDVFQEITKKL 437
           +  S D    +  +L
Sbjct: 426 EAISFDSSALMLGQL 440


>gi|194015095|ref|ZP_03053712.1| flagellar protein export ATPase FliI [Bacillus pumilus ATCC 7061]
 gi|194014121|gb|EDW23686.1| flagellar protein export ATPase FliI [Bacillus pumilus ATCC 7061]
          Length = 438

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 164/430 (38%), Positives = 240/430 (55%), Gaps = 12/430 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLG 60
           N++ L +  E        + G ++ +  +   +        +GD  +   K         
Sbjct: 2   NIDVLKETIETADP--YKRFGKVNRVVGLM--IESKGPESSIGDVCLIHKKGRKHDPIKA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      IS G LV   G   ++       G V++A G+P+DG   L
Sbjct: 58  EVVGFRDENILLMPYVEASNISPGSLVEATGESLKVKVGTGLIGEVVDAFGEPLDGS-ML 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M+R  + +    G+RVID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 117 PKGLAPVSTDQSPPNPMDRPPIREKMGVGVRVIDSLLTVGTGQRIGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  +I+LVGERGREVREFI +D   + LK+S+VVVATSD+  + R  A  TA
Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGTEGLKRSIVVVATSDQPALTRMKAAYTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G
Sbjct: 237 TAIAEYFRDRGKNVMFMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFAILPKLLERTG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 297 TNQL--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S D K+  +    L+  ++   D+  IG Y+ G    +D A+   P +  FLK
Sbjct: 355 RVMSNIASHDHKEAANRFRQLLSTYQNAEDLINIGAYKKGSSKDIDDAMQAYPHLISFLK 414

Query: 419 QSPSDLSSED 428
           Q   +  S D
Sbjct: 415 QDVEEAVSID 424


>gi|56413614|ref|YP_150689.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362538|ref|YP_002142175.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56127871|gb|AAV77377.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094015|emb|CAR59511.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 433

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPEVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDAYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|54307262|ref|YP_128282.1| putative FliI, flagellum-specific ATP synthase [Photobacterium
           profundum SS9]
 gi|46911682|emb|CAG18480.1| Putative FliI, flagellum-specific ATP synthase [Photobacterium
           profundum SS9]
          Length = 446

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 240/423 (56%), Gaps = 7/423 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G ++ +     T+  +   +C G   + +  +   +  +V+  + +   + P+ 
Sbjct: 23  PIARTYGRLTRMAG--LTLEAVGCRLCTGQRCMIETDHGTLVEAEVVGFDRNASVLMPIR 80

Query: 77  IGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G  VF   G  +I+      GRV+N LG+P+D    +   D  + +  +    
Sbjct: 81  HTTGLRPGSRVFPLHGDSKINVGYSMLGRVLNGLGEPLDSRGPI-TADQRINLQGETINP 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +      G+RVI+    +  GQR+G+FAGSG+GKS LL M  R+   +  ++ L+
Sbjct: 140 LQRLPISTQLDVGVRVINSMLSVGKGQRMGLFAGSGVGKSVLLGMMTRNTTAEITVVGLI 199

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATS-DESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFIE  LG    K+ VV+A+  D+ P++R  A +    IAE+F  +G +VLL
Sbjct: 200 GERGREVREFIEHSLGPEGMKNAVVIASPADDPPLMRLRASMLCHRIAEFFRDQGHDVLL 259

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA   GE P  +GYP SVFS LP+L+ER G    EKG+ITA  +VL
Sbjct: 260 LMDSLTRYAQAQREIALAVGEPPATKGYPPSVFSMLPQLVERAGNGATEKGSITAFYTVL 319

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DPIAD+ R+ILDGHIVLNR LAE+G YP +D   S+SR   +  + ++ +   
Sbjct: 320 SEGDDQQDPIADAARAILDGHIVLNRELAEQGHYPAIDIEQSISRAMPQVVTPEQLQKAQ 379

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
            +  L  R+ + +D+  +GGY+ G D  LD AVH  P I DFL+Q  ++ +   D  Q++
Sbjct: 380 QVKQLYARYRQVQDLISLGGYQQGQDQNLDMAVHYYPEICDFLQQGMNERVLLADSQQQL 439

Query: 434 TKK 436
            + 
Sbjct: 440 MQL 442


>gi|33593244|ref|NP_880888.1| type III secretion system ATPase [Bordetella pertussis Tohama I]
 gi|29603230|emb|CAC79575.1| bscN [Bordetella pertussis Tohama I]
 gi|33563619|emb|CAE42520.1| putative ATP synthase in type III secretion system [Bordetella
           pertussis Tohama I]
 gi|332382653|gb|AEE67500.1| type III secretion system ATPase [Bordetella pertussis CS]
          Length = 444

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 150/427 (35%), Positives = 231/427 (54%), Gaps = 12/427 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLDIVYICPV 75
           + +   G +  +      +  +   V +G+  + +    D    G+V+    D   + P+
Sbjct: 19  STLRIKGRVVQVVGTI--IKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID--GDDSLGKGDLSMEIMSKV 132
           G    IS    V   GR   +       GRV++ LG+P+D      L        + +  
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDAAESGPLHAHKF-YPVFADA 135

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  ++
Sbjct: 136 PDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVTVV 195

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+  +   +  +KSV+V ATSD+S + R  A   A  IAEYF  +G  
Sbjct: 196 ALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQGQR 255

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL ++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G ++   G+ITA+ 
Sbjct: 256 VLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITALY 313

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   K 
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVF 430
           L   +  L+ ++++   +  IG Y+ G D   D+A+ ++  I  FL+Q   +  + ED  
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433

Query: 431 QEITKKL 437
             + + +
Sbjct: 434 LRMAEII 440


>gi|302506935|ref|XP_003015424.1| hypothetical protein ARB_06550 [Arthroderma benhamiae CBS 112371]
 gi|291178996|gb|EFE34784.1| hypothetical protein ARB_06550 [Arthroderma benhamiae CBS 112371]
          Length = 569

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/418 (23%), Positives = 175/418 (41%), Gaps = 22/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  +   V   + V      S   G  + +    V +   G    
Sbjct: 86  AETGRVLSVGDGIARVHGM-HNVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 141

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 142 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIKSAEKRRA-QVKAPGILPRK 200

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK      T+L+    +   D      
Sbjct: 201 SVNQPVQTGMKCVDSMVPIGRGQRELIIGDRQTGKTAVALDTMLNQKRWNSSNDETKKLY 260

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 261 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGCAMGEWFRDN 320

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER        + G+
Sbjct: 321 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDTHKGGS 380

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 381 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQL 440

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ     
Sbjct: 441 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQP 495


>gi|324995409|gb|EGC27321.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK678]
          Length = 501

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDKAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|164685670|gb|ABY66781.1| atp1 [Hydnora africana]
          Length = 412

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/408 (23%), Positives = 169/408 (41%), Gaps = 20/408 (4%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  D V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVGIVIFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG P+DG  +L        +  K P  + RQ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPLDGRGALSSDHGRRRVEVKAPGIIERQSVHEPMQTG 116

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERG 199
           ++ +D   P+  GQR  +      GK+ +      +               +   +G++ 
Sbjct: 117 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQKR 176

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + +++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 177 STVAQLVQIISEANALEYTILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 236

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 237 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 296

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 297 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSL 356

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + ++ E   +     +   +D      +H+   + + LKQ   + 
Sbjct: 357 KLELAQYRE---VAAFAQFGSDLDAATQALLHRGARLTEVLKQPQYEP 401


>gi|156849119|ref|XP_001647440.1| hypothetical protein Kpol_1018p115 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118126|gb|EDO19582.1| hypothetical protein Kpol_1018p115 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 546

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L+      + V     +S   G  + +    V I   G    +
Sbjct: 65  ETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SSGVKGMALNLEPGQVGIVLFGSDRLV 120

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G++V   G+   +       GRV++ALG PIDG   +     +     K P  + R+ 
Sbjct: 121 KEGEIVKRTGKIVDVPVGPGLLGRVVDALGNPIDGKGPIKAAGYTRA-QVKAPGILPRRS 179

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK       +L+    +   D       
Sbjct: 180 VHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDAILNQKRWNSGSDEKKKLYC 239

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   V + ++     D LK S++V AT+ E+  L+ +AP TA +I E+F   G
Sbjct: 240 VYVAIGQKRSTVAQLVQTLEQHDALKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNG 299

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L++ D +++ A + R+++      P    YP  VF    RLLER      +   G++
Sbjct: 300 RHSLIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKEGGGSM 359

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 360 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 419

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + + +   +   LKQS 
Sbjct: 420 ALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQ 470


>gi|60099315|emb|CAD70262.1| ATPase alpha subunit [Huperzia lucidula]
          Length = 403

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD+V
Sbjct: 1   SVGDGIARVYGLNK-IQAGELVEFA---SGVKGMALNLENENVGIVIFGSDTAIKEGDIV 56

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPVGKAMLGRVVDALGIPIDGKGALNAVE-RRRVEVKAPGIIARKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVIISLV 195
           TG++ +D   P+  GQR  +      GK      T+L+    +            +   +
Sbjct: 116 TGLKAVDSPVPIGRGQRELIIGDRQTGKTAIAIDTILNQKRINAQGTSESDKLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++        + SV+V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVKILSEAGALEYSVIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ + + R+++      P    +P  VF    RLLER          G++TA+  
Sbjct: 236 IYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYPHSRLLERAAKMSDRTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQYLLNRGARLTEVLKQPQ 401


>gi|116494660|ref|YP_806394.1| F0F1 ATP synthase subunit alpha [Lactobacillus casei ATCC 334]
 gi|191638159|ref|YP_001987325.1| F0F1 ATP synthase subunit alpha [Lactobacillus casei BL23]
 gi|227535356|ref|ZP_03965405.1| F0F1 ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631739|ref|ZP_04674770.1| ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066219|ref|YP_003788242.1| F0F1-type ATP synthase subunit alpha [Lactobacillus casei str.
           Zhang]
 gi|122263919|sp|Q03A20|ATPA_LACC3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739900|sp|B3WDL6|ATPA_LACCB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116104810|gb|ABJ69952.1| ATP synthase F1 subcomplex alpha subunit [Lactobacillus casei ATCC
           334]
 gi|165940487|gb|ABY75188.1| F0F1-type ATP synthase alpha subunit [Lactobacillus casei str.
           Zhang]
 gi|190712461|emb|CAQ66467.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
           sector subunit alpha) [Lactobacillus casei BL23]
 gi|227186952|gb|EEI67019.1| F0F1 ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526204|gb|EEQ65205.1| ATP synthase subunit alpha [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438626|gb|ADK18392.1| F0F1-type ATP synthase, alpha subunit [Lactobacillus casei str.
           Zhang]
 gi|327382190|gb|AEA53666.1| ATP synthase subunit A [Lactobacillus casei LC2W]
 gi|327385387|gb|AEA56861.1| ATP synthase subunit A [Lactobacillus casei BD-II]
          Length = 509

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y  +L  +  G ++ I       T L +     + +     +    G  + 
Sbjct: 10  SLIKKQLEGYQDDLAAEEVGTVTYIGDGIARATGL-ENAMANELLQFSNGS---YGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  +EI  GD V   GR   +       GRV+N+LG+P+DG  ++ K D
Sbjct: 66  LETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGDAMIGRVVNSLGQPVDGLGAI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEFKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   VR  +E          ++V+ A   E   +  +AP     
Sbjct: 185 NQKDQNMICVYVAIGQKDSTVRAQVETLKKYGAMDYTIVLTAGPSEPAPMLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A S RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 305 SDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDAATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPVH 425


>gi|34539309|gb|AAQ74538.1| F1-ATPase alpha subunit [Haemodorum simulans]
          Length = 418

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|269812163|gb|ACZ44461.1| ATP synthase F1 subunit alpha [Pythium ultimum]
          Length = 510

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/435 (23%), Positives = 190/435 (43%), Gaps = 22/435 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           + + +   +  + + G + S++        L++ +  G+ V     N +  G  + +  D
Sbjct: 11  SNIKKYKDEKSLQETGIVLSMSDGIARCYGLTK-IQAGEMVEF--NNGNIKGMALNLEPD 67

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V +       EI  G+ V   G    +   A   GRV++ALG+PIDG   +    +S  
Sbjct: 68  VVGVVVFSNDREIQEGNFVRRTGSIVSVPVGAELLGRVVDALGQPIDGKGQITTNQISR- 126

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--- 184
           +  K P  M RQ V +  +TG++ +D   P+  GQR  +      GK+++      +   
Sbjct: 127 VEIKAPGIMPRQSVNEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAIDTIINQRE 186

Query: 185 -------DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
                  D     I   VG++   + E  +     N    S++V AT+ +S  L+ +AP 
Sbjct: 187 PHLKKDVDNQLYCIYVGVGQKRSTIAELTKTLEEKNAMFFSIIVAATASDSAPLQFLAPY 246

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   + EYF   G + ++  D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 247 TGCALGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 306

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                K+   G++TA+  +     + +  I  +V SI DG I L   L  +G+ P +   
Sbjct: 307 AAKMNKKIGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNQGQRPAISVG 366

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  ++   + +F E +       +   +D    + +H+   + 
Sbjct: 367 LSVSRVGSAAQIKAMKQIAGTMKLELAQFREVQ---AFAQFGSDLDATTQQQLHRGVRLT 423

Query: 415 DFLKQSPS-DLSSED 428
           + LKQ  +  L+ ED
Sbjct: 424 EMLKQDLNMPLAVED 438


>gi|299830473|ref|YP_003734844.1| ATP synthase F1 subunit alpha [Pythium ultimum]
 gi|269810850|gb|ACZ43879.1| ATP synthase F1 subunit alpha [Pythium ultimum]
          Length = 510

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/435 (23%), Positives = 190/435 (43%), Gaps = 22/435 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           + + +   +  + + G + S++        L++ +  G+ V     N +  G  + +  D
Sbjct: 11  SNIKKYKDEKSLQETGIVLSMSDGIARCYGLTK-IQAGEMVEF--NNGNIKGMALNLEPD 67

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V +       EI  G+ V   G    +   A   GRV++ALG+PIDG   +    +S  
Sbjct: 68  VVGVVVFSNDREIQEGNFVRRTGSIVSVPVGAELLGRVVDALGQPIDGKGQITTNQISR- 126

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--- 184
           +  K P  M RQ V +  +TG++ +D   P+  GQR  +      GK+++      +   
Sbjct: 127 VEIKAPGIMPRQSVNEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAIDTIINQRE 186

Query: 185 -------DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
                  D     I   VG++   + E  +     N    S++V AT+ +S  L+ +AP 
Sbjct: 187 PHLKKDVDNQLYCIYVGVGQKRSTIAELTKTLEEKNAMFFSIIVAATASDSAPLQFLAPY 246

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   + EYF   G + ++  D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 247 TGCALGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 306

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                K+   G++TA+  +     + +  I  +V SI DG I L   L  +G+ P +   
Sbjct: 307 AAKMNKKIGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNQGQRPAISVG 366

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  ++   + +F E +       +   +D    + +H+   + 
Sbjct: 367 LSVSRVGSAAQIKAMKQIAGTMKLELAQFREVQ---AFAQFGSDLDATTQQQLHRGVRLT 423

Query: 415 DFLKQSPS-DLSSED 428
           + LKQ  +  L+ ED
Sbjct: 424 EMLKQDLNIPLAVED 438


>gi|115374787|ref|ZP_01462062.1| ATP synthase F1, alpha subunit [Stigmatella aurantiaca DW4/3-1]
 gi|115368183|gb|EAU67143.1| ATP synthase F1, alpha subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 463

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 86/373 (23%), Positives = 162/373 (43%), Gaps = 10/373 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
             G V+ +  D V +  +G  ++I  GD V    +   +       GRV+NALG+P+DG 
Sbjct: 7   VRGLVLNLEEDNVGVAIMGEFKDIREGDSVKRTSQIASVPVGKGLLGRVVNALGEPLDGK 66

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   +    +  K P  + R+ V +  +TGI+ +D   P+  GQR  +      GK+ 
Sbjct: 67  GPIQAAETRR-LEIKAPGIVKRKSVHEPLQTGIKALDALVPIGRGQRELIIGDRQTGKTA 125

Query: 177 LLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           +      +        I   +G++   V + ++       L+ + VV A + +   ++  
Sbjct: 126 VAVDAIINQKGLNVYCIYVAIGQKQSTVAQVVDKLSKFGALEYTTVVAANASDPAPMQFF 185

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T VT+ EY+     + L++ D +++ A + R+++      P    YP  VF    RL
Sbjct: 186 APYTGVTMGEYYRDNKMHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYIHSRL 245

Query: 294 LERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER       +G  ++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 246 LERAAKLSDAEGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFAGVRPAI 305

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     +++  S+   + ++ E   +     +   +D    + + +  
Sbjct: 306 NVGLSVSRVGSAAQIKAMRQVAGSMKLELAQYRE---LAAFAQFGSDLDKATQETLARGA 362

Query: 412 IIYDFLKQSPSDL 424
            + + LKQ   + 
Sbjct: 363 RLTELLKQGQYEP 375


>gi|156845989|ref|XP_001645883.1| hypothetical protein Kpol_1045p9 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116553|gb|EDO18025.1| hypothetical protein Kpol_1045p9 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 544

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L+      + V     +S   G  + +    V I   G    +
Sbjct: 63  ETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SSGVKGMALNLEPGQVGIVLFGSDRLV 118

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G++V   G+   +       GRV++ALG PIDG   +     +     K P  + R+ 
Sbjct: 119 KEGEIVKRTGKIVDVPVGPGLLGRVVDALGNPIDGKGPIKAAGYTRA-QVKAPGILPRRS 177

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK       +L+    +   D       
Sbjct: 178 VHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDAILNQKRWNSGSDEKKKLYC 237

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   V + ++     D LK S++V AT+ E+  L+ +AP TA +I E+F   G
Sbjct: 238 VYVAIGQKRSTVAQLVQTLEQHDALKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNG 297

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L++ D +++ A + R+++      P    YP  VF    RLLER      +   G++
Sbjct: 298 RHSLIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKEGGGSM 357

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 358 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 417

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + + +   +   LKQS 
Sbjct: 418 ALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQ 468


>gi|313205915|ref|YP_004045092.1| ATP synthase f1 subcomplex alpha subunit [Riemerella anatipestifer
           DSM 15868]
 gi|312445231|gb|ADQ81586.1| ATP synthase F1 subcomplex alpha subunit [Riemerella anatipestifer
           DSM 15868]
 gi|315022227|gb|EFT35255.1| F0F1 ATP synthase subunit alpha [Riemerella anatipestifer RA-YM]
 gi|325336645|gb|ADZ12919.1| F0F1-type ATP synthase, alpha subunit [Riemerella anatipestifer
           RA-GD]
          Length = 525

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 109/449 (24%), Positives = 177/449 (39%), Gaps = 36/449 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   +++ V + G +  I      V  L + V  G+ V  +   S   G V+ +  D 
Sbjct: 16  QLANFDTQSNVEEVGTVLQIGDGIARVYGL-ENVQYGELVKFE---SGIEGIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  +++  GD V    R   I       GRV++ LG PIDG   +G     M +
Sbjct: 72  VGVALLGESKQVKEGDTVKRTNRISSIKVGEGMLGRVVDTLGNPIDGKGPIGGELYEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  + RQ V +  +TGI  +D   P+  GQR  +      GK+T+      +    
Sbjct: 132 ERKAPGVIYRQPVNEPLQTGIVAVDSMIPIGRGQRELIIGDRQTGKTTVAIDTILNQKEF 191

Query: 189 K-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I   VG++G  V + ++          +VVV A + +   ++  AP+    
Sbjct: 192 YDAGEPVFCIYVAVGQKGSTVAQIVKTLEDKGAMAYTVVVAANASDPSPMQVYAPMAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEYFRDTGRPALIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKV 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 IADDSIAKQMNDLPDSLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     KK+  +L     +++E         +   +D
Sbjct: 372 DLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQYKELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
                 + +     + LKQ  +     D 
Sbjct: 429 AATLAVITKGEKNVEILKQPVNSPLPVDS 457


>gi|269963174|ref|ZP_06177509.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832138|gb|EEZ86262.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 440

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 156/434 (35%), Positives = 234/434 (53%), Gaps = 12/434 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRIN 66
            Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+   
Sbjct: 10  TQQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQ 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
                + P+G    IS    V   G+   +       G++++ LG+P DG  S  +    
Sbjct: 68  QHHALLTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGTQS-KEPSAW 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS 
Sbjct: 127 YPVYRDAPPPMQRKLIEKPISMGVRSIDGLITCGEGQRMGIFAAAGGGKSTLLAKLIRSA 186

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +++L+GERGREVREFI  D   + + +SV+VVATSD   + R  A   A +IAEY
Sbjct: 187 DVDVTVLALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEY 246

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  
Sbjct: 247 FRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK-- 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++ 
Sbjct: 305 GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQI 364

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + 
Sbjct: 365 VDKTHQASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTXEP 424

Query: 425 SSEDVFQEITKKLQ 438
           S  D   E   +L+
Sbjct: 425 SELD---ETVTQLR 435


>gi|46908703|ref|YP_015092.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47094110|ref|ZP_00231834.1| ATP synthase F1, alpha subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|226225079|ref|YP_002759186.1| H+-transporting ATP synthase chain alpha [Listeria monocytogenes
           Clip81459]
 gi|254825346|ref|ZP_05230347.1| ATP synthase F1 sector subunit alpha [Listeria monocytogenes FSL
           J1-194]
 gi|254853940|ref|ZP_05243288.1| ATP synthase F1 sector subunit alpha [Listeria monocytogenes FSL
           R2-503]
 gi|254932227|ref|ZP_05265586.1| ATP synthase F1 sector subunit alpha [Listeria monocytogenes
           HPB2262]
 gi|255519773|ref|ZP_05387010.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes FSL J1-175]
 gi|300764969|ref|ZP_07074957.1| ATP synthase F1, alpha subunit [Listeria monocytogenes FSL N1-017]
 gi|81698745|sp|Q71WP7|ATPA2_LISMF RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|46881975|gb|AAT05269.1| ATP synthase F1, alpha subunit [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017517|gb|EAL08326.1| ATP synthase F1, alpha subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|225877541|emb|CAS06255.1| Putative H+-transporting ATP synthase chain alpha [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258607329|gb|EEW19937.1| ATP synthase F1 sector subunit alpha [Listeria monocytogenes FSL
           R2-503]
 gi|293583784|gb|EFF95816.1| ATP synthase F1 sector subunit alpha [Listeria monocytogenes
           HPB2262]
 gi|293594589|gb|EFG02350.1| ATP synthase F1 sector subunit alpha [Listeria monocytogenes FSL
           J1-194]
 gi|300514269|gb|EFK41328.1| ATP synthase F1, alpha subunit [Listeria monocytogenes FSL N1-017]
 gi|308445538|gb|ADO32956.1| AtpA [Listeria monocytogenes]
 gi|328465135|gb|EGF36403.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes 1816]
 gi|328471141|gb|EGF42045.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes 220]
 gi|332312961|gb|EGJ26056.1| ATP synthase F1, alpha subunit [Listeria monocytogenes str. Scott
           A]
          Length = 504

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V   G ++ I         L      G+ +         +G    
Sbjct: 10  SIIKQQIENYQSELKVSDVGTVTYIGDGIARAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   G+   +       GRV+N+LG+P+DG   + +  
Sbjct: 66  LETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEALIGRVVNSLGQPVDGLGPI-ETT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +  P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 GTRPIEAVAPGVMQRQSVNEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     I   +G++   VR  +E       L  ++VV A + +   L  +AP   V 
Sbjct: 185 NQADQDMICIYVAIGQKESTVRNAVETLRHHGALDYTIVVTAAASQPAPLLYLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDSLGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K +  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKTVAGTLRLDLAAYRELE---SFSQFGSDLDAATRAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QDLH 425


>gi|264676470|ref|YP_003276376.1| ATP synthase F1 subunit alpha [Comamonas testosteroni CNB-2]
 gi|299531208|ref|ZP_07044619.1| F0F1 ATP synthase subunit alpha [Comamonas testosteroni S44]
 gi|262206982|gb|ACY31080.1| ATP synthase F1, alpha subunit [Comamonas testosteroni CNB-2]
 gi|298720791|gb|EFI61737.1| F0F1 ATP synthase subunit alpha [Comamonas testosteroni S44]
          Length = 519

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 187/450 (41%), Gaps = 29/450 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     V   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASTDVRNQGTVVSVTDGIVRVHGLSD-VMAGEMLEFPAGA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
                 G  + +  D V    +G  E I+ G+ V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPTYGLALNLERDSVGAVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        I   +G++   ++  +           ++VV AT+ ES  
Sbjct: 179 GKTAVAIDAIINQKGQGVICIYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAATASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++     T+ EYF  +G++ L++ D +++ A + R+++      P    +P  VF  
Sbjct: 239 MQYVSAYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGSAQTKVVKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +D    K + +   + + LKQ+     S
Sbjct: 416 SDLDDATRKQLDRGARVTELLKQAQYSPLS 445


>gi|308048755|ref|YP_003912321.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
 gi|307630945|gb|ADN75247.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
          Length = 446

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 151/419 (36%), Positives = 231/419 (55%), Gaps = 6/419 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V  G +  +     T+  +     +G     +  N     +V+  +  ++Y+ PV   + 
Sbjct: 25  VASGQLLRVVG--LTLEAVGCRAPVGSLCQIETLNGQLTAEVVGFDDQVLYLMPVEELKG 82

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G+ + +       GRV++  G+P+DG   L   +      + +   M R+
Sbjct: 83  VLPGARVTPMGQRQGLPVGPELLGRVLDGNGEPLDGLGPLATRE-RAPHHATLLNPMARR 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D +++ LVGERG
Sbjct: 142 PIHQPIDVGVRTINAMLTVGEGQRMGLFAGSGVGKSVLLGMMTRGTNADVIVVGLVGERG 201

Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV+EFIE+ LG +   +SVVV A +D SP++R  A  TA  IAE+F  +G NVLL++DS
Sbjct: 202 REVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETATRIAEHFRDQGRNVLLLMDS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REIA   GE P  +GYP SVF+ LP+L+ER G     +G+ITA  +VL +GD
Sbjct: 262 LTRYAQAQREIALAIGEPPATKGYPPSVFARLPQLVERAGNGGVGQGSITAFYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  DPIAD+ R+ILDGHIVL+R+LAE G YP +D  AS+SR+          +    +  
Sbjct: 322 DQQDPIADAARAILDGHIVLSRALAESGHYPAIDIEASISRVMPMVTEPLHLEAAQLIKQ 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQEITKK 436
           L   + + +D+  IG Y  G D  +DKA+   P    FL+Q+    +  E    ++ + 
Sbjct: 382 LWSAYRQNQDLIAIGAYSAGSDPQVDKAIAMQPAFNAFLRQAMKTPVDYEQSLTQLARL 440


>gi|300689830|ref|YP_003750825.1| ATP synthase, F1 sector, alpha subunit [Ralstonia solanacearum
           PSI07]
 gi|299076890|emb|CBJ49503.1| ATP synthase, F1 sector, alpha subunit [Ralstonia solanacearum
           PSI07]
          Length = 513

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/446 (23%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L         G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISDLIKTRIEGLKAGADAKNTGTVISVTDGICRIHGLS-GVMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGEYEHISEGDEVKCTGRILEVPVGRELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKQTDV-IEKVAPGVIARQSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +         + ++VV A + +S  ++
Sbjct: 176 TAVAVDAIINQKGKGIFCVYVAIGQKASTIANVVRKLEEHGALEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEHIEKITNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDDATRKQLERGRRVTELLKQPQYQP 438


>gi|297617141|ref|YP_003702300.1| flagellar protein export ATPase FliI [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144978|gb|ADI01735.1| flagellar protein export ATPase FliI [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 447

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 155/424 (36%), Positives = 240/424 (56%), Gaps = 11/424 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDIVYICP 74
           N +V  G IS +     T+        +G+  + +           +V+    +   + P
Sbjct: 20  NPLVFKGRISQVVG--LTIESDGPRARMGELCLVRSPGRSDKPLRCEVVGFKGNKTLLMP 77

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + I  G  +   G+ F++       GRV+N LG+PIDG   + + + +  +M+  P
Sbjct: 78  LGELDGIGPGSEIVATGQTFKVRVGRSLVGRVLNGLGEPIDGGGPV-ETETTYPVMNHPP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R+ +    G+R ID    +  GQR+G+ AGSG+GKSTLL M AR+   D  +I+
Sbjct: 137 DPLKRRRITEVLPVGVRAIDALVTVGKGQRMGILAGSGVGKSTLLGMIARNTEADVSVIA 196

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVR+F+  D   + LK+SVVVVATSD+  ++R      A +IAE+F  +G +V
Sbjct: 197 LIGERGREVRDFLERDLGEEGLKRSVVVVATSDQPALIRLRGAFVATSIAEFFRDQGLDV 256

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REI    GE P  RG+  SVF+ LP+LLER G S+K  G IT + +
Sbjct: 257 LLLMDSLTRFALAQREIGLAIGEPPATRGFTPSVFALLPKLLERAGASDK--GTITGLYA 314

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+PI D+VR I+DGHI L R LA    +P +D L S+SR+  +  S+   + 
Sbjct: 315 VLVEGDDMNEPITDAVRGIVDGHIALTRELASLNHFPAIDVLGSISRVMPEIVSSSHLES 374

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQ 431
                 L+  + E +D+  IG YR G +  +D+A+  +     FL+Q   + +S  D   
Sbjct: 375 AGRFRSLLAVYREAKDLVDIGAYRRGANPRIDEALELIDGCNAFLQQGVWEKASFNDTVL 434

Query: 432 EITK 435
           E+ +
Sbjct: 435 ELEQ 438


>gi|227514479|ref|ZP_03944528.1| H(+)-transporting two-sector ATPase [Lactobacillus fermentum ATCC
           14931]
 gi|227087165|gb|EEI22477.1| H(+)-transporting two-sector ATPase [Lactobacillus fermentum ATCC
           14931]
          Length = 512

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 176/426 (41%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA    +  V + G ++ +         L +    G+ +  +       G    +  +
Sbjct: 14  KQLANYQDQISVEETGTVTYVGDGVARADGL-ENAMAGELLEFENG---VYGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G    I  GD V   GR   +       GRV++ LG+PIDG   + K D +  
Sbjct: 70  DVGIVILGDDTAIREGDTVKRTGRIMEVPVGDALLGRVVDPLGRPIDGLGDI-KTDKTRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSD 185
           I  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK+   + ++  + D
Sbjct: 129 IERKAPGVMERKSVSQPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSIAIDTIINQKD 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G++   VR  +E       L  ++VV A++     L  +AP     + E 
Sbjct: 189 QDMICIYVAIGQKESTVRSQVETLRKFGALDYTIVVSASASNPAPLLYIAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL+I D +++ A + RE++      P    YP  +F    RLLER      + 
Sbjct: 249 FMFGGRDVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G+ P +D   SVSR+  
Sbjct: 309 GGGSMTALPVIQTQAGDVSAYIPTNVISITDGQIFLDADSFYAGQRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   I  + E   +     +   +D      + +     + LKQ   
Sbjct: 369 DAQIKAMKKVSGTLRLDIASYNE---LAAFAQFGSDLDAATKARLDRGERTMEVLKQGLH 425

Query: 423 DLSSED 428
                +
Sbjct: 426 APQPVE 431


>gi|33600613|ref|NP_888173.1| type III secretion system ATPase [Bordetella bronchiseptica RB50]
 gi|33568212|emb|CAE32125.1| putative ATP synthase in type III secretion system [Bordetella
           bronchiseptica RB50]
          Length = 444

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 150/427 (35%), Positives = 231/427 (54%), Gaps = 12/427 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLDIVYICPV 75
           + +   G +  +      +  +   V +G+  + +    D    G+V+    D   + P+
Sbjct: 19  STLRIKGRVVQVVGTI--IKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID--GDDSLGKGDLSMEIMSKV 132
           G    IS    V   GR   +       GRV++ LG+P+D      L        + +  
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAESGPLHAHKF-YPVFADA 135

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  ++
Sbjct: 136 PDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVTVV 195

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+  +   +  +KSV+V ATSD+S + R  A   A  IAEYF  +G  
Sbjct: 196 ALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQGQR 255

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL ++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G ++   G+ITA+ 
Sbjct: 256 VLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITALY 313

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   K 
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVF 430
           L   +  L+ ++++   +  IG Y+ G D   D+A+ ++  I  FL+Q   +  + ED  
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433

Query: 431 QEITKKL 437
             + + +
Sbjct: 434 LRMAEII 440


>gi|315046356|ref|XP_003172553.1| ATP synthase subunit alpha [Arthroderma gypseum CBS 118893]
 gi|311342939|gb|EFR02142.1| ATP synthase subunit alpha [Arthroderma gypseum CBS 118893]
          Length = 596

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 174/418 (41%), Gaps = 22/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  +   V   + V      S   G  + +    V +   G    
Sbjct: 113 AETGRVLSVGDGIARVHGM-HNVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 168

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 169 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIKATEKRRA-QLKAPGILPRK 227

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK      T+L+    +   D      
Sbjct: 228 SVNQPVQTGMKCVDSMVPIGRGQRELIIGDRQTGKTAVALDTMLNQKRWNSSNDETKKLY 287

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S++V AT+ E+  L+ +AP T   + E+F   
Sbjct: 288 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIIVAATASEAAPLQYIAPFTGCAMGEWFRDN 347

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER          G+
Sbjct: 348 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDHHKGGS 407

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 408 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQL 467

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ     
Sbjct: 468 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQP 522


>gi|67459660|ref|YP_247284.1| F0F1 ATP synthase subunit alpha [Rickettsia felis URRWXCal2]
 gi|75535944|sp|Q4UK16|ATPA_RICFE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|67005193|gb|AAY62119.1| ATP synthase alpha chain [Rickettsia felis URRWXCal2]
          Length = 510

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/435 (24%), Positives = 182/435 (41%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + S+      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVISVGDGIAKIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKEVLEVPIGKALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          ++VV AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTIVVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 417

Query: 407 VHQVPIIYDFLKQSP 421
           +     + + LKQ+ 
Sbjct: 418 IDHGKRLVEILKQAQ 432


>gi|254441547|ref|ZP_05055040.1| ATP synthase F1, alpha subunit [Octadecabacter antarcticus 307]
 gi|198251625|gb|EDY75940.1| ATP synthase F1, alpha subunit [Octadecabacter antarcticus 307]
          Length = 512

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 177/447 (39%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   +  G+ V   G  
Sbjct: 1   MAIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVYGL-DNIQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V     G  + I  GD+V        +       GRV++ LG PID
Sbjct: 59  --IQGMALNLEADNVGCVIFGSDQAIKEGDIVKRTNAIVDVPVGDELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K        +K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTTKRAVADAKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           + +      +                  +   +G++   V + ++          S+VV 
Sbjct: 176 TAIALDTILNQKSYNAAAGDDEGKKLYCVYVAIGQKRSTVAQLVKKLEEAGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   L+ +AP  A  +AE+F   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPLQFLAPYAATAMAEHFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSSKLNEDNGSGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A ++    +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGIRPAVNTGLSVSRVGGSAQTSAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      + +   + + +KQ      +
Sbjct: 413 DASTQALLARGARLTELMKQKQYSPLT 439


>gi|168463175|ref|ZP_02697106.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197249395|ref|YP_002146627.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|195634193|gb|EDX52545.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197213098|gb|ACH50495.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
          Length = 433

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|312867088|ref|ZP_07727298.1| ATP synthase F1, alpha subunit [Streptococcus parasanguinis F0405]
 gi|311097217|gb|EFQ55451.1| ATP synthase F1, alpha subunit [Streptococcus parasanguinis F0405]
          Length = 501

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 106/434 (24%), Positives = 183/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD V   G+    P      GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETTDVGIIILGDFTDIREGDSVRRTGKIMEVPAGDALIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 V-TDKFRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGAMDYTIVVTASASQPSPLLYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L  SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPIIETQAGDISAYIATNVISITDGQIFLQDSLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGAAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +  + +
Sbjct: 418 EVLKQPVHEPLTVE 431


>gi|16764765|ref|NP_460380.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161614168|ref|YP_001588133.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167995049|ref|ZP_02576139.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|194442812|ref|YP_002040667.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|3024659|sp|P74857|SSAN_SALTY RecName: Full=Probable secretion system apparatus ATP synthase SsaN
 gi|1669750|emb|CAA70537.1| secretion system apparatus [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16419936|gb|AAL20339.1| secretion system apparatus protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161363532|gb|ABX67300.1| hypothetical protein SPAB_01910 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401475|gb|ACF61697.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|205327193|gb|EDZ13957.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261246621|emb|CBG24431.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993304|gb|ACY88189.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157950|emb|CBW17445.1| type III secretion ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912400|dbj|BAJ36374.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224039|gb|EFX49102.1| Type III secretion cytoplasmic ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323129687|gb|ADX17117.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332988302|gb|AEF07285.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 433

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|322389185|ref|ZP_08062746.1| ATP synthase F1 sector alpha subunit [Streptococcus parasanguinis
           ATCC 903]
 gi|321144090|gb|EFX39507.1| ATP synthase F1 sector alpha subunit [Streptococcus parasanguinis
           ATCC 903]
          Length = 501

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 106/434 (24%), Positives = 183/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD V   G+    P      GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETTDVGIIILGDFTDIREGDSVRRTGKIMEVPAGDALIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 V-TDKFRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGAMDYTIVVTASASQPSPLLYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L  SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPIIETQAGDISAYIATNVISITDGQIFLQDSLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGAAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +  + +
Sbjct: 418 EVLKQPVHEPLTVE 431


>gi|21230693|ref|NP_636610.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66769312|ref|YP_244074.1| type III secretion system ATPase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21112282|gb|AAM40534.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66574644|gb|AAY50054.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 442

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 167/416 (40%), Positives = 239/416 (57%), Gaps = 9/416 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIG 78
            + G +  +      V  +   V LG+    + ++   L   +V+  +  +  + P G  
Sbjct: 23  RRYGKVVEVIGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRTLALLAPFGEL 80

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR   +   +   GRV++ LG+P DG   L  GD  ++I ++ P  M 
Sbjct: 81  VGLSRQTRVIGLGRPLAVPVGSALLGRVLDGLGEPADGQGPL-AGDDWVQIQAQAPDPMR 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D  +I L+GE
Sbjct: 140 RRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLIGMFARGTQCDVNVIVLIGE 199

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  +G  VLL++
Sbjct: 200 RGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGMRVLLMM 259

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+ITA  +VL +
Sbjct: 260 DSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGET--GSITAFYTVLAE 317

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            D  +DPIA+ VR ILDGH++L+R +A   +YP +D L S+SR+  +  SA++++    L
Sbjct: 318 DDTGSDPIAEEVRGILDGHLILSREIAARNQYPAIDVLGSLSRVMSQIVSAEQRQYAGQL 377

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             L+ +  E   +  +G YR G D + D+A+ ++  I DFL Q    LS  D   E
Sbjct: 378 RRLLAKHNEVETLLQVGEYRHGSDAVADEAIARIDAIRDFLSQPTDQLSDYDTILE 433


>gi|288904996|ref|YP_003430218.1| F0F1 ATP synthase alpha chain [Streptococcus gallolyticus UCN34]
 gi|306831067|ref|ZP_07464228.1| ATP synthase F1 sector alpha subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977963|ref|YP_004287679.1| F-type H+-transporting ATPase subunit alpha [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288731722|emb|CBI13283.1| F0F1 ATP synthase alpha chain [Streptococcus gallolyticus UCN34]
 gi|304426633|gb|EFM29744.1| ATP synthase F1 sector alpha subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177891|emb|CBZ47935.1| F-type H+-transporting ATPase subunit alpha [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 501

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 177/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|327305237|ref|XP_003237310.1| mitochondrial ATP synthase alpha subunit [Trichophyton rubrum CBS
           118892]
 gi|326460308|gb|EGD85761.1| mitochondrial ATP synthase alpha subunit [Trichophyton rubrum CBS
           118892]
          Length = 555

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/418 (23%), Positives = 175/418 (41%), Gaps = 22/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  +   V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGM-HNVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +   +       K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIKSAEKRRA-QVKAPGILPRK 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK      T+L+    +   D      
Sbjct: 187 SVNQPVQTGMKCVDSMVPIGRGQRELIIGDRQTGKTAVALDTMLNQKRWNSSNDETKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGN 306
           G + L+I D +++ A + R+++      P    YP  VF    RLLER        + G+
Sbjct: 307 GRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDTHKGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQL 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ     
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQP 481


>gi|34539177|gb|AAQ74472.1| F1-ATPase alpha subunit [Alpinia purpurata]
          Length = 416

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 169/407 (41%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGLGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMFSRGTTETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L  +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILVAATASDPAPLLFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKEVCG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 SFKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 400


>gi|306773424|emb|CBJ55288.1| putative alpha subunit of ATP synthase [Cyathea senilis]
          Length = 490

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V   P G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGQNVICVYVAIGQKASSVAQVVNTFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKQHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SLQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|296876802|ref|ZP_06900850.1| ATP synthase F1 sector alpha subunit [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432304|gb|EFH18103.1| ATP synthase F1 sector alpha subunit [Streptococcus parasanguinis
           ATCC 15912]
          Length = 501

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 106/434 (24%), Positives = 183/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD V   G+    P      GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETTDVGIIILGDFTDIREGDSVRRTGKIMEVPAGDALIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 V-TDKFRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGAMDYTIVVTASASQPSPLLYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L  SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPIIETQAGDISAYIATNVISITDGQIFLQDSLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +  + +
Sbjct: 418 EVLKQPVHEPLTVE 431


>gi|258508176|ref|YP_003170927.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus GG]
 gi|257148103|emb|CAR87076.1| ATP synthase A chain [Lactobacillus rhamnosus GG]
 gi|259649494|dbj|BAI41656.1| F0F1-type ATP synthase subunit alpha [Lactobacillus rhamnosus GG]
          Length = 509

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y  +L  +  G ++ I       T L +     + +     +    G  + 
Sbjct: 10  SLIKKQLEGYQDDLAAEEVGTVTYIGDGIARATGL-ENAMANELLQFSNGS---YGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  +EI  GD V   GR   +       GRV+N+LG+P+DG  ++ K D
Sbjct: 66  LETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGEAMIGRVVNSLGQPVDGLGAI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEFKAPGVMQRQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   VR  +E          ++V+ A   E   +  +AP     
Sbjct: 185 NQKDQNMICVYVAIGQKDSTVRAQVETLKKYGAMDYTIVLTAGPSEPAPMLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A S RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 305 SDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDAATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPVH 425


>gi|306833167|ref|ZP_07466297.1| ATP synthase F1 sector alpha subunit [Streptococcus bovis ATCC
           700338]
 gi|304424741|gb|EFM27877.1| ATP synthase F1 sector alpha subunit [Streptococcus bovis ATCC
           700338]
          Length = 501

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 177/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|224418193|ref|ZP_03656199.1| F0F1 ATP synthase subunit alpha [Helicobacter canadensis MIT
           98-5491]
 gi|253827520|ref|ZP_04870405.1| ATP synthase F1, subunit alpha [Helicobacter canadensis MIT
           98-5491]
 gi|313141728|ref|ZP_07803921.1| ATP synthase subunit alpha [Helicobacter canadensis MIT 98-5491]
 gi|253510926|gb|EES89585.1| ATP synthase F1, subunit alpha [Helicobacter canadensis MIT
           98-5491]
 gi|313130759|gb|EFR48376.1| ATP synthase subunit alpha [Helicobacter canadensis MIT 98-5491]
          Length = 504

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 101/431 (23%), Positives = 181/431 (41%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++   N      + Q G + +       V  L   +   + V     + 
Sbjct: 4   KLQADEISSIIKERIDNFELDLNIAQTGKVIAYADGVAKVYGLKDAMSY-EMVEFDTGDK 62

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G    +    V +  +G G+EI  G  V   G+  R+       GRV+NALG+PIDG
Sbjct: 63  ---GLASSLEEGSVGVVVLGAGKEIKEGTSVKRLGKLLRVPVGDDLMGRVVNALGEPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +    +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGAIEAKEFKF-MEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +        I   +G++   V + +           +++V A + +S  ++ 
Sbjct: 179 TVAIDTIINQKGQDVVCIYVAIGQKESTVAQVVRKLEEHGAMEYTIIVNAPASDSAAMQY 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   VT+ EYF   G + L++ D +++ A + RE++      P    +P  VF    R
Sbjct: 239 LAPYAGVTMGEYFRDNGRHALIVYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSR 298

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     +    I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERAAKVSDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 359 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLDRG 415

Query: 411 PIIYDFLKQSP 421
             + + LKQ P
Sbjct: 416 QRMVEVLKQPP 426


>gi|198284881|ref|YP_002221202.1| F0F1 ATP synthase subunit alpha [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665445|ref|YP_002427561.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226739835|sp|B7JB86|ATPA_ACIF2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739836|sp|B5ER44|ATPA_ACIF5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|198249402|gb|ACH84995.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517658|gb|ACK78244.1| ATP synthase F1, alpha subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 514

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/447 (23%), Positives = 183/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   +++L                 G I S++     +  L + V  G+ +   G   
Sbjct: 3   QLNPSEISELIRARIAGFEGRVETRSQGTIISLSDGILRIHGL-EDVMYGEMLELPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  GD+V   GR  ++       GRV+NALG+P+DG
Sbjct: 60  -RFGLAMNLEQDNVGAVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +  + +    P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGAIDAEEFDV-LEKIAPGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      + I   +G++   V   +           + V+ A + ES  ++ 
Sbjct: 178 AVAVDAILNQKGKDVQCIYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G N L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADFVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGIRLDLAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D I  K + +   + + LKQ      S
Sbjct: 415 DEITRKQIERGKRVTELLKQDQFSPMS 441


>gi|24374737|ref|NP_718780.1| flagellum-specific ATP synthase [Shewanella oneidensis MR-1]
 gi|24349399|gb|AAN56224.1|AE015760_3 flagellum-specific ATP synthase FliI [Shewanella oneidensis MR-1]
          Length = 445

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 153/433 (35%), Positives = 237/433 (54%), Gaps = 5/433 (1%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            L    +       V  G +  +  +    +       +G     +    + + +V+  +
Sbjct: 11  KLNHYIDKVPPFRAVASGQLVRVVGLTLEASG--CRAPVGSLCSIETMVGELIAEVVGFD 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            +++Y+ P+     +  G  V   G    ++      GRV++  G P+DG  +L   +  
Sbjct: 69  DELLYLMPIEELRGVLPGARVVPLGEQAGLNVGLSLLGRVLDGNGVPLDGLGALS-TEQQ 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
               S     ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R  
Sbjct: 128 APRHSNAINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGT 187

Query: 186 CFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D +++ LVGERGREV+EFIE+ LG+    +SVVV A +D SP++R  A  T+  IAEY
Sbjct: 188 TADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACETSTRIAEY 247

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F   G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LPRL+ER G     +
Sbjct: 248 FRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQ 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLA+ G YP +D  AS+SR+A   
Sbjct: 308 GSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMV 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S +  + +  +      +++ +D+  IG Y  G D  +D A+   P +  FL+Q+  D 
Sbjct: 368 ISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAFLRQTMRDA 427

Query: 425 SSEDVFQEITKKL 437
            S    Q +  +L
Sbjct: 428 FSFADSQVMLGQL 440


>gi|30468238|ref|NP_849125.1| ATP synthase CF1 alpha subunit [Cyanidioschyzon merolae strain 10D]
 gi|75298601|sp|Q85FQ8|ATPA_CYAME RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|30409338|dbj|BAC76287.1| ATP synthase CF1 alpha chain [Cyanidioschyzon merolae strain 10D]
          Length = 495

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 182/423 (43%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +S+ +     G +  +      V  L+  V  G+ +         +G  + 
Sbjct: 11  SMIRQQIEQFSQQVQFNHVGTVMQVGDGIARVYGLND-VMAGELLEFADG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++       GRV+NAL +PIDG   + +  
Sbjct: 67  LESDHVGAVLMGDGRNILEGSEVKSSGQIAQVPVGEELLGRVVNALVQPIDGKGGI-ETK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  I S  P  + RQ V +  +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 QTRLIESPAPGIVARQSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIALDTII 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + +     +   +G++   V   +        +  ++VV A +D++  L+ +AP T   
Sbjct: 186 NQKNEDVICVYVAIGQKASSVAAAVNLLATKGAMDYTIVVTANADDAASLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 IAEHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NKELGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSSDLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F+E +       +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIQSMKKVAGRLKLELAQFDELQ---AFSQFASDLDKATQMQLARGQRLREVLK 422

Query: 419 QSP 421
           QS 
Sbjct: 423 QSQ 425


>gi|75279623|sp|O99015|ATPA_PROWI RecName: Full=ATP synthase subunit alpha, plastid; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|4469303|emb|CAB38453.1| ATP synthase CF1 alpha chain [Prototheca wickerhamii]
          Length = 506

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 101/409 (24%), Positives = 173/409 (42%), Gaps = 14/409 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
            V  G +  +      +  L   V  G+ +  Q    + +G  + +    V +  +G G 
Sbjct: 26  SVTIGTVFQVGDGIAHIYGLDD-VMAGELLEFQ---DNTIGIALNLETKSVGVVLMGDGT 81

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I   A + GRV+N L  PIDG   + K D++  I S  P  + R
Sbjct: 82  TIQEGSFVRATGKIAQIPVGAAFLGRVVNPLALPIDGKGEI-KSDINRIIESPAPGIICR 140

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVG 196
           + + +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 141 RSIHEPLQTGILAIDSMIPIGRGQRELIIGDRQTGKTAICIDTIINQKGKNIVCVYVAIG 200

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   + + +         + +++V AT+D    L+ +AP    T+AE+F   G + L+I
Sbjct: 201 QKASSIAQVVNILQERGALEYTIIVAATADSPATLQYLAPYAGATLAEFFMYNGQHTLII 260

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + REI+      P    YP  VF    RLLER     ++   G++TA+  V
Sbjct: 261 YDDLTKQAQAYREISLLLRRPPGREAYPGDVFYLHSRLLERAAKLNEKLGGGSMTALPVV 320

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L      P ++   SVSR+   A     K++ 
Sbjct: 321 ETQEGDISAYIPTNVISITDGQIFLSADLFNANVRPAINVGVSVSRVGSAAQPKAMKQVA 380

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             L   + +F E         +   +D    K + +   + + LKQ   
Sbjct: 381 GKLKLELAQFAELE---AFSQFASDLDQSTQKQLARGQRLRELLKQVQH 426


>gi|332140585|ref|YP_004426323.1| flagellum-specific ATP synthase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550607|gb|AEA97325.1| flagellum-specific ATP synthase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 444

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 152/435 (34%), Positives = 229/435 (52%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
                 L +  +   VV  G +  +  +  T+  +   + +G   + Q    +   +V+ 
Sbjct: 6   HSHFESLTKQVTTPPVVAAGKL--VRGIGLTLEAVGCQLPVGSQCLVQTVEGEIEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
              DI Y+ P      I  G  V    R   +       GRV++  G+P+DG   +   +
Sbjct: 64  FGDDITYLMPTEAVRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDGLGEID-AE 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       + R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 123 ARAPTTRPPMNPLIRRPINAPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTR 182

Query: 184 SDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D V++ LVGERGREV+EFI D    +  +++VVV A +D SP++R     TAVTIA
Sbjct: 183 GCEADVVVVGLVGERGREVKEFIHDILTEEERQRAVVVAAPADTSPLMRLKGCETAVTIA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG  VLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G   +
Sbjct: 243 EYFRDKGMKVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSE 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LA+ G YP +D  AS+SR+  
Sbjct: 303 RQGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMP 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S + + +   +  +   +++ +D+  IG Y  G D  +D A+   P I   L+Q   
Sbjct: 363 MVVSEEHQLMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINALLQQGMK 422

Query: 423 DLSSEDVFQEITKKL 437
            +   D   E    L
Sbjct: 423 QVIPYDESLEGMAAL 437


>gi|89112834|gb|ABD61029.1| ATPase alpha subunit [Guaiacum officinale]
          Length = 429

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 3   GRVISVGDGIARVYGL-KEIKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 58

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 59  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 118 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESEKLYCV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 178 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 238 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 298 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 358 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 407


>gi|16801736|ref|NP_472004.1| F0F1 ATP synthase subunit alpha [Listeria innocua Clip11262]
 gi|81595186|sp|Q927W2|ATPA2_LISIN RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|16415211|emb|CAC97901.1| atpA [Listeria innocua Clip11262]
          Length = 504

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V   G ++ I         L      G+ +         +G    
Sbjct: 10  SIIKQQIENYQSELKVSDVGTVTYIGDGIARAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   G+   +       GRV+N+LG+P+DG   + +  
Sbjct: 66  LETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEALIGRVVNSLGQPVDGLGPI-ETT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +  P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 GTRPIEAVAPGVMQRQSVNEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     I   +G++   VR  +E       L  ++VV A + +   L  +AP   V 
Sbjct: 185 NQADQDMICIYVAIGQKESTVRNAVETLRHHGALDYTIVVTAAASQPAPLLYLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMYSGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDSLGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K +  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKTVAGTLRLDLAAYRELE---SFSQFGSDLDAATRAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QDLH 425


>gi|257042775|gb|ACV33040.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S     RV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAXXXRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      G   + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGXXXVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|209886224|ref|YP_002290081.1| flagellar protein export ATPase FliI [Oligotropha carboxidovorans
           OM5]
 gi|209874420|gb|ACI94216.1| flagellar protein export ATPase FliI [Oligotropha carboxidovorans
           OM5]
          Length = 441

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 164/436 (37%), Positives = 254/436 (58%), Gaps = 7/436 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIR 64
           + LA+   D     V   G +  +  +   V      + +G  +V +   +  +  +VI 
Sbjct: 2   KALAEQIGDIDG--VNIYGRVVGVRGLMVEVAGPIHAMSVGARIVIETGGARTIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
                  + P    E +  G   +      ++ P A W GRV+NA+G+PIDG   L +G 
Sbjct: 60  FTGSNAVVMPFAGLEGVRRGCRAIIVNAASQVRPCAAWLGRVVNAMGEPIDGKGPLPQGS 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           + +   +  PPA  R+RV +    G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 VPVSFRNLPPPAHARKRVGEPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D  +I LVGERGREV+EF++D    + L +SVVVVATSDE  ++R+ A    + IA
Sbjct: 180 NVDADISVIGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAIA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP   
Sbjct: 240 EYFRDQDQSVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLG 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR   
Sbjct: 300 -EGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINILKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K+   +   ++     ++  + +  ++  +G YR G    +D+A+     + DFL+Q+  
Sbjct: 359 KSADPEFLPVIMRGRQVMATYADMEELIRLGAYRAGSSPEVDEAIRLHEPLEDFLRQAKD 418

Query: 423 DLSSEDV-FQEITKKL 437
           + +     +Q++ + L
Sbjct: 419 EATGLASGYQQLQQIL 434


>gi|168240928|ref|ZP_02665860.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|194450969|ref|YP_002045418.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|200391071|ref|ZP_03217682.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|194409273|gb|ACF69492.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|199603516|gb|EDZ02062.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205339235|gb|EDZ25999.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
          Length = 433

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPEVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|157737831|ref|YP_001490515.1| F0F1 ATP synthase subunit alpha [Arcobacter butzleri RM4018]
 gi|315637621|ref|ZP_07892827.1| ATP synthase F1 sector alpha subunit [Arcobacter butzleri JV22]
 gi|166990353|sp|A8EV72|ATPA_ARCB4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157699685|gb|ABV67845.1| ATP synthase F1 sector, alpha subunit [Arcobacter butzleri RM4018]
 gi|315478075|gb|EFU68802.1| ATP synthase F1 sector alpha subunit [Arcobacter butzleri JV22]
          Length = 505

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  +++  N+ V + G I S       V  L + V  G+ V  +       G    
Sbjct: 12  SIIKERIDNFELNVDVNETGKIISYADGIAQVYGL-KNVMAGEIVEFENGEK---GLASN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G GE +  G      G+           GRV+NALG+PIDG  ++   +
Sbjct: 68  LEESSVGVVILGKGEGLREGTSCKRVGKLLETPVGEALVGRVVNALGEPIDGKGAIAATE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-VEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTIL 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   +   +           ++VV A++ +S  L+ +AP T VT
Sbjct: 187 NQKGENVICIYVAIGQKSSSIASVVRTLEESGAMDYTIVVNASAADSSALQFLAPYTGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G + L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 IGEYFRDNGKHALIIYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKM 306

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+G  ++TA+  +     +    I  +V SI DG I L  +L   G  P ++   SVS
Sbjct: 307 SDERGAGSMTALPIIETQAGDVAAYIPTNVISITDGQIFLETNLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E         +   +D    + +     + + LK
Sbjct: 367 RVGGAAQIKATKQVAGTLKLSLAQYRELE---AFAQFASDLDEATRRELELGQRMVEVLK 423

Query: 419 QSPS 422
           Q  +
Sbjct: 424 QGVN 427


>gi|221069422|ref|ZP_03545527.1| ATP synthase F1, alpha subunit [Comamonas testosteroni KF-1]
 gi|220714445|gb|EED69813.1| ATP synthase F1, alpha subunit [Comamonas testosteroni KF-1]
          Length = 519

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 188/450 (41%), Gaps = 29/450 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     V   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASTDVRNQGTVVSVTDGIVRVHGLSD-VMAGEMLEFPAGA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
                 G  + +  D V    +G  E I+ G+ V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPTYGLALNLERDSVGAVILGAYEHIAEGNTVKCTGRILEVPVGPELVGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        I   +G++   ++  +           ++VV AT+ ES  
Sbjct: 179 GKTAVAIDAIINQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMDYTIVVAATASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    +P  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGSAQTKVVKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +D    K + +   + + LKQ+     S
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQAQYSPLS 445


>gi|728921|sp|P41167|ATPA_THIFE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|154672|gb|AAA53125.1| F1F0-ATPase alpha subunit [Acidithiobacillus ferrooxidans]
          Length = 514

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/447 (23%), Positives = 182/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   +++L                 G I S++     +  L + V  G+ +   G   
Sbjct: 3   QLNPSEISELIRARIAGFEGRVETRSQGTIISLSDGILRIHGL-EDVMYGEMLELPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  GD+V   GR  ++       GRV+NALG+P+DG
Sbjct: 60  -RFGLAMNLEQDNVGAVVLGEFSGLQEGDVVKCTGRVMQVPIGKALLGRVVNALGQPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +  + +    P  ++RQ V++  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGAIDAEEFDV-LEKIAPGVIDRQSVDEPMQTGIKSIDAMVPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      + I   +G++   V   +           + V+ A + ES  ++ 
Sbjct: 178 AVAVDAILNQKGKDVQCIYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G N L++ D +T+ A + R I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRHISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADFVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGIRLDLAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D I  K + +   + + LKQ      S
Sbjct: 415 DEITRKQIERGKRVTELLKQDQFSPMS 441


>gi|204927532|ref|ZP_03218733.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204322874|gb|EDZ08070.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 433

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPEVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|228474853|ref|ZP_04059582.1| ATP synthase F1, alpha subunit [Staphylococcus hominis SK119]
 gi|314935946|ref|ZP_07843296.1| ATP synthase F1, alpha subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271085|gb|EEK12465.1| ATP synthase F1, alpha subunit [Staphylococcus hominis SK119]
 gi|313655952|gb|EFS19694.1| ATP synthase F1, alpha subunit [Staphylococcus hominis subsp.
           hominis C80]
          Length = 502

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+     G+ V         LG    
Sbjct: 10  ALLRSQIENYESEMSVDDVGTVLQIGDGIALIHGLND-CMAGELVEFSNG---VLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   EI  GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYSEIREGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINSTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 126 -TRPVEQKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIGIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A++ E   L  +AP + VT
Sbjct: 185 NQKGLDTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVSASAAEPAPLLYIAPYSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G NVL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMFNGKNVLVVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  +     + +  +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDALGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEYTARKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDQN 425


>gi|73662088|ref|YP_300869.1| F0F1 ATP synthase subunit alpha [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|124007217|sp|Q49Z52|ATPA_STAS1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|72494603|dbj|BAE17924.1| F0F1-type ATP synthase alpha subunit [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 503

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   + V   G +  I      +  L+  V  G+ +  +   S  LG    
Sbjct: 10  ALLRSQIENYESEMAVTDVGTVLQIGDGIALIHGLND-VMAGELIEFK---SGVLGLAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G   +I  GD V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEESNVGVVILGPYADIKEGDEVKRTGRIMEVPVGNELIGRVVNPLGQPIDGQGPVNTTS 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +  K    M+R+ V++  +TGI+ ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     I   +G++   VR  +E    +     ++VV A++ +   +  +AP + V 
Sbjct: 185 NQADQDTICIYVAIGQKDSTVRANVEKLRQEGALDYTIVVSASAADPAPMLYIAPYSGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMFAGKDVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     +    +  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDDLGGGSITALPIIETQAGDIAAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    K + +     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---SDLDEFTAKKLERGKRTVEILK 421

Query: 419 QSPS 422
           Q  +
Sbjct: 422 QDKN 425


>gi|288871077|ref|ZP_06410012.1| flagellar protein export ATPase FliI [Clostridium hathewayi DSM
           13479]
 gi|288864877|gb|EFC97175.1| flagellar protein export ATPase FliI [Clostridium hathewayi DSM
           13479]
          Length = 440

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 170/431 (39%), Positives = 252/431 (58%), Gaps = 11/431 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNL 59
            K +E++ Q  ++   NL    G I  I     TV  +     +GD       G +   +
Sbjct: 6   HKMIESVRQAVQN--ANLYTYLGKIDKIVGT--TVESMGPACRIGDVCTIDVPGGSPPVM 61

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+    + V + P    E I  G  V + G R  I  S    GR ++A+G PIDG   
Sbjct: 62  AEVVGFRENRVLLMPYEETEGIGYGSTVRNTGERLLIPVSNELIGRTVDAMGMPIDGQGP 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           LG+      I  K    M R R++   + G++ ID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 122 LGEV-AYYPITGKRSNPMERPRIDTVIQMGVKAIDGLLTIGKGQRMGIFAGSGVGKSTLM 180

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+LVGER REV EFI  D   + LK+SV+VVATS++S ++R    +T
Sbjct: 181 GMIAKNVKADVNVIALVGERSREVVEFINRDLGEEGLKRSVLVVATSNQSAMMRSKCTMT 240

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A TIAEYF  +G +VLL++DS+TRFA + RE+  + GE PVARGY  S++SELP+LLER 
Sbjct: 241 ATTIAEYFKDQGMDVLLMMDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLERS 300

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E   G+IT + +VLV+GD+ N+P++D+VR I+DGHI+L+R +A + RYP +D L+SV
Sbjct: 301 GNFET--GSITGIYTVLVEGDDANEPVSDTVRGIIDGHIMLSRKVATQNRYPAIDILSSV 358

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL       + K+    +  L+  +E   D+  IG Y+ G +  LD A+ ++  IY+FL
Sbjct: 359 SRLMSDIVMPEHKEAAGKIRKLLSVYESNIDLVSIGAYKKGTNKELDDALMRIDKIYEFL 418

Query: 418 KQSPSDLSSED 428
           +Q   +  + D
Sbjct: 419 QQKTDESFTLD 429


>gi|260663294|ref|ZP_05864185.1| ATP synthase F1, alpha subunit [Lactobacillus fermentum 28-3-CHN]
 gi|260552146|gb|EEX25198.1| ATP synthase F1, alpha subunit [Lactobacillus fermentum 28-3-CHN]
          Length = 512

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 176/426 (41%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA    +  V + G ++ +         L +    G+ +  +       G    +  +
Sbjct: 14  KQLANYQDQISVEETGTVTYVGDGVARADGL-ENAMAGELLEFENG---VYGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G    I  GD V   GR   +       GRV++ LG+PIDG   + K D +  
Sbjct: 70  DVGIVILGDDSAIREGDTVKRTGRIMEVPVGDDLLGRVVDPLGRPIDGLGDI-KTDKTRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSD 185
           I  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK+   + ++  + D
Sbjct: 129 IERKAPGVMERKSVSQPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSIAIDTIINQKD 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G++   VR  +E       L  ++VV A++     L  +AP     + E 
Sbjct: 189 QDMICIYVAIGQKESTVRSQVETLRKFGALDYTIVVSASASNPAPLLYIAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL+I D +++ A + RE++      P    YP  +F    RLLER      + 
Sbjct: 249 FMFGGRDVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G+ P +D   SVSR+  
Sbjct: 309 GGGSMTALPVIQTQAGDVSAYIPTNVISITDGQIFLDADSFYAGQRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   I  + E   +     +   +D      + +     + LKQ   
Sbjct: 369 DAQIKAMKKVSGTLRLDIASYNE---LAAFAQFGSDLDAATKARLDRGERTMEVLKQGLH 425

Query: 423 DLSSED 428
                +
Sbjct: 426 APQPVE 431


>gi|4100655|gb|AAD00916.1| proton-translocating ATPase alpha subunit [Streptococcus sanguinis]
          Length = 501

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 184/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L   +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDNAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|12659355|gb|AAG60212.1| ATPase alpha subunit [Calycanthus floridus]
          Length = 413

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 171/410 (41%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           SL   + ++ E   +     +   +D +    +++   + + LKQ   + 
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVLKQPQYEP 402


>gi|160895867|ref|YP_001561449.1| F0F1 ATP synthase subunit alpha [Delftia acidovorans SPH-1]
 gi|226739868|sp|A9BPU5|ATPA_DELAS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160361451|gb|ABX33064.1| ATP synthase F1, alpha subunit [Delftia acidovorans SPH-1]
          Length = 517

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 188/450 (41%), Gaps = 29/450 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAGSSDIRNEGTVVSVTDGIVRVHGLSD-VMQGEMLEFPAGK 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPSFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPLQTGIKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        I   +G++   ++  +           ++VV AT+ ES  
Sbjct: 179 GKTAVAIDAIINQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMEYTIVVAATASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    +P  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K     +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLVKGQSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +D    K + +   + + LKQ+     S
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQAQYSPLS 445


>gi|2662324|dbj|BAA23753.1| proton-translocating ATPase alpha subunit [Streptococcus equinus]
          Length = 501

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 177/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|215400704|ref|YP_002327465.1| ATP synthase CF1 alpha subunit [Vaucheria litorea]
 gi|194441154|gb|ACF70882.1| ATP synthase CF1 alpha subunit [Vaucheria litorea]
          Length = 504

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 178/423 (42%), Gaps = 16/423 (3%)

Query: 8   LAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           +      Y  N+V     G +  +      V  L   V  G+ V     +   +G  + +
Sbjct: 13  IRHQIAIYEPNVVKIDNNGTVLQVGDGIARVYGLDD-VMAGELVEF---DDGTIGIALNL 68

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V +  +G G  I  G  V   GR  +I       GRV+N+L  PIDG   +   + 
Sbjct: 69  ENSNVGVVLMGNGLNILEGSNVKATGRIAQIPVGEAMLGRVVNSLAIPIDGKGQIQTKES 128

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      +
Sbjct: 129 RL-IESMAPGIISRKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIALDTIIN 187

Query: 185 DCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
                   +   +G++   V + +      D L  +++V A +D+   L+ +AP T  ++
Sbjct: 188 QKGQDVICVYVAIGQKASAVAQAVTTLQEKDALNYTIIVTANADQPATLQYIAPYTGASL 247

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF   G   L+I D +++ A + R+++      P    YP  VF    RLLER     
Sbjct: 248 AEYFMYNGKATLVIYDDLSKQASAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 307

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR
Sbjct: 308 DSLGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGLRPAINIGISVSR 367

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  +L   + +F+E         +   +D      + +   + + LKQ
Sbjct: 368 VGSSAQIKAMKQVAGTLKLELAQFDELE---AFSQFASDLDKATQNQLARGQRLREILKQ 424

Query: 420 SPS 422
           + +
Sbjct: 425 AQN 427


>gi|25010934|ref|NP_735329.1| F0F1 ATP synthase subunit alpha [Streptococcus agalactiae NEM316]
 gi|81744547|sp|Q8E5V0|ATPA_STRA3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|23095313|emb|CAD46523.1| H+-transporting ATP synthase alpha chain [Streptococcus agalactiae
           NEM316]
          Length = 501

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  ED+  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIEDFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFSNG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G   EI  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSEIREGDVVKRTGKIMEVPVGEAMIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -ETTATRPVETPAPGVMQRKSVFEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKLSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     K++  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGAAQIKAMKRVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPLH 425


>gi|303274717|ref|XP_003056674.1| ATP synthase [Micromonas pusilla CCMP1545]
 gi|226461026|gb|EEH58319.1| ATP synthase [Micromonas pusilla CCMP1545]
          Length = 562

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 102/436 (23%), Positives = 179/436 (41%), Gaps = 27/436 (6%)

Query: 6   ETLAQLAED-----YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + L+ L E+     YS   + + G + S+      V  L+     G+ V      S   G
Sbjct: 57  QELSSLLEERISGHYSALDMAEIGRVLSVGDGIARVYGLNNIQS-GEMVEFA---SGVKG 112

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G    IS GD+V   G    +       GRV++ LG  IDG  +L
Sbjct: 113 MALNLENDNVGVVCFGSDTSISEGDIVKRTGTIVDVPVGRGMLGRVVDGLGNAIDGKGAL 172

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 173 TDVTQRR-VEIKAPGIIVRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 231

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
               +                +   VG++   V + ++          S++V AT+ +  
Sbjct: 232 DTIINQKGVHDSGAENEKLYCVYVAVGQKRSTVAQLVKQLKDKGALDYSIIVAATASDPA 291

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP  A  + EYF   G + L+I D +++ + + R+++      P    +P  VF 
Sbjct: 292 PLQFLAPYAATAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFY 351

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++TA+  V   G + +  I  +V SI DG I L   L  +G
Sbjct: 352 LHSRLLERSAKMSDEVGAGSMTALPVVETQGGDVSAYIPTNVISITDGQIFLETELFFKG 411

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D      
Sbjct: 412 IRPAINVGLSVSRVGSAAQMKAMKQVSGSLKLELAQYRE---VAAFAQFGSDLDAATQYL 468

Query: 407 VHQVPIIYDFLKQSPS 422
           +++   + + LKQ   
Sbjct: 469 LNRGSRLTEVLKQGQF 484


>gi|160939663|ref|ZP_02087011.1| hypothetical protein CLOBOL_04555 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437454|gb|EDP15218.1| hypothetical protein CLOBOL_04555 [Clostridium bolteae ATCC
           BAA-613]
          Length = 434

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 168/429 (39%), Positives = 247/429 (57%), Gaps = 11/429 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQ 61
            L+ + ++ E+    L    G I  I     TV        LGD          S  + +
Sbjct: 2   ELDQIERVIEN--AGLYTYLGKIDKIVGT--TVESTGPACRLGDVCTIDVVEGGSPVMAE 57

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
           V+    + V + P G  E I  G  V + G R  I+ S    GR ++A+G PID    + 
Sbjct: 58  VVGFRENKVLLMPYGETEGIGYGSAVRNTGERLHIAVSNHLIGRTVDAMGNPIDDLGPVE 117

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  +    M R R++   + G++ ID    +  GQR+G+FAGSG+GKSTL+ M
Sbjct: 118 DVSY-YSITGRPSNPMTRPRIDTIIQMGVKAIDGLMTVGKGQRMGIFAGSGVGKSTLMGM 176

Query: 181 FARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            A++   D  +I+LVGER REV EFI  D   + L++SV+VVATS++S ++R    +TA 
Sbjct: 177 IAKNVKADVNVIALVGERSREVVEFIHRDLGEEGLRRSVLVVATSNQSAMMRSKCTMTAT 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAEYF  +G +VLL++DS+TRFA + RE+  + GE PVARGY  S++SELP+LLER G 
Sbjct: 237 TIAEYFKDQGMDVLLMMDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLERSGN 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E+  G+IT + +VLV+GD+ N+PI+D+VR I+DGHI+L+R +A    YP +D L+SVSR
Sbjct: 297 FEE--GSITGIYTVLVEGDDANEPISDTVRGIIDGHIMLSRKVAARNHYPAIDILSSVSR 354

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L +   + + K     L  L+  +E  RD+  IG Y+ G +  LD A+ ++  IY FL+Q
Sbjct: 355 LMNDIVTPEHKAAAGKLRRLLSVYESNRDLVSIGAYKKGTNPELDDALERIDRIYGFLQQ 414

Query: 420 SPSDLSSED 428
              +  S D
Sbjct: 415 KTDESFSLD 423


>gi|260900953|ref|ZP_05909348.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ4037]
 gi|308110837|gb|EFO48377.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ4037]
          Length = 440

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 157/433 (36%), Positives = 233/433 (53%), Gaps = 12/433 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 11  QQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G++++ LG+P DG  S        
Sbjct: 69  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGKILDGLGRPFDGAQSQEPS-AWY 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 128 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAD 187

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   D + +SV+VVATSD   + R  A   A +IAEYF
Sbjct: 188 VDVTVLALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYF 247

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 248 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 306 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             D +   + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + S
Sbjct: 366 EPDHQASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPS 425

Query: 426 SEDVFQEITKKLQ 438
                +    +L+
Sbjct: 426 D---LEGAIAQLK 435


>gi|90961574|ref|YP_535490.1| F0F1 ATP synthase subunit alpha [Lactobacillus salivarius UCC118]
 gi|119367956|sp|Q1WUC8|ATPA_LACS1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|90820768|gb|ABD99407.1| ATP synthase alpha chain [Lactobacillus salivarius UCC118]
          Length = 503

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 172/419 (41%), Gaps = 14/419 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA    +  V + G ++ +         L   +  G+ V     +    G    +  + 
Sbjct: 15  QLANYQDELTVDEVGTVTYVGDGIARANGLDNALA-GELVEF---DDGTYGMAQNLESND 70

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I  +G  + I  GD V   GR   +       GRV+N LG+PIDG   + K + +  +
Sbjct: 71  VGIIILGSFKGIREGDTVKRTGRIMEVPVGEELIGRVVNPLGQPIDGLGEV-KTNKTRPV 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDC 186
             K P  M RQ V +  +TG++ ID   P+  GQR  V      GK+   + ++  + D 
Sbjct: 130 ERKAPGVMERQSVTEPLQTGLKAIDALVPIGRGQRELVIGDRKTGKTSVAIDTIINQKDQ 189

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
               I   +G++   VR  +E       +  ++VV A       L  +AP     + E F
Sbjct: 190 DMICIYVAIGQKDSTVRTSVETLRKFGAMDYTIVVSAGPSSPAPLLYLAPYAGAAMGEEF 249

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
              G +VL++ D +++ A + RE++      P    YP  VF    RLLER      E  
Sbjct: 250 MFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDELG 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVSR+   
Sbjct: 310 GGSMTALPFIETKAGDVSAYIPTNVISITDGQIFLDSDRFYSGIRPAIDAGTSVSRVGGN 369

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           A     KK+  +L   +  + E       G     +D      +++     + LKQ   
Sbjct: 370 AQVKAMKKVAGTLRTDLASYSELESFAQFG---SDLDEATQAKLNRGRRTVEVLKQPLH 425


>gi|116490721|ref|YP_810265.1| F0F1 ATP synthase subunit alpha [Oenococcus oeni PSU-1]
 gi|290890140|ref|ZP_06553222.1| hypothetical protein AWRIB429_0612 [Oenococcus oeni AWRIB429]
 gi|122277095|sp|Q04G22|ATPA_OENOB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116091446|gb|ABJ56600.1| ATP synthase F1 subcomplex alpha subunit [Oenococcus oeni PSU-1]
 gi|290480184|gb|EFD88826.1| hypothetical protein AWRIB429_0612 [Oenococcus oeni AWRIB429]
          Length = 520

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 178/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +       + L+  V  G+ V  +       G    
Sbjct: 10  SLIKQQLEKYDSTLKIDEVGTVTYVGDGVARASGLA-NVMSGELVEFENG---VYGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  + IS GD V   G+   +       GRV+NALG+PIDG+ ++ K  
Sbjct: 66  LEESEVGIIVLGDFDGISQGDTVKRTGKVMEVPVGDEMIGRVVNALGQPIDGNGAI-KTK 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  +  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 HTRPVEFKAPGVMQRKSVFEPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D    V+   +G++   VR  +E          ++VV A   E   +  +AP     
Sbjct: 185 NQKDQDMIVVYVAIGQKDSTVRTQVETLREMGALDYTIVVSAAPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 LGEYFMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLDADQFYSGNRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + L 
Sbjct: 365 RVGGDAQIKAMKKVSGTLRLDLASYHELE---AFAQFGSDLDAPTQAKLARGRRTVEVLN 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPLHQP 427


>gi|16804569|ref|NP_466054.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes EGD-e]
 gi|47096954|ref|ZP_00234530.1| ATP synthase F1, alpha subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217963366|ref|YP_002349044.1| ATP synthase F1, alpha subunit [Listeria monocytogenes HCC23]
 gi|224499884|ref|ZP_03668233.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes Finland
           1988]
 gi|224503229|ref|ZP_03671536.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes FSL R2-561]
 gi|254828106|ref|ZP_05232793.1| atpA [Listeria monocytogenes FSL N3-165]
 gi|254831046|ref|ZP_05235701.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes 10403S]
 gi|254900331|ref|ZP_05260255.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes J0161]
 gi|254913430|ref|ZP_05263442.1| ATP synthase subunit alpha 2 [Listeria monocytogenes J2818]
 gi|254937811|ref|ZP_05269508.1| atpA [Listeria monocytogenes F6900]
 gi|255025916|ref|ZP_05297902.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes FSL J2-003]
 gi|255028505|ref|ZP_05300456.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes LO28]
 gi|284802969|ref|YP_003414834.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes 08-5578]
 gi|284996110|ref|YP_003417878.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes 08-5923]
 gi|290892694|ref|ZP_06555686.1| atpA protein [Listeria monocytogenes FSL J2-071]
 gi|315283683|ref|ZP_07871799.1| ATP synthase F1, alpha subunit [Listeria marthii FSL S4-120]
 gi|81768747|sp|Q8Y4C0|ATPA2_LISMO RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|16412019|emb|CAD00609.1| atpA [Listeria monocytogenes EGD-e]
 gi|47014664|gb|EAL05621.1| ATP synthase F1, alpha subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217332636|gb|ACK38430.1| ATP synthase F1, alpha subunit [Listeria monocytogenes HCC23]
 gi|258600491|gb|EEW13816.1| atpA [Listeria monocytogenes FSL N3-165]
 gi|258610415|gb|EEW23023.1| atpA [Listeria monocytogenes F6900]
 gi|284058531|gb|ADB69472.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes 08-5578]
 gi|284061577|gb|ADB72516.1| F0F1 ATP synthase subunit alpha [Listeria monocytogenes 08-5923]
 gi|290557754|gb|EFD91276.1| atpA protein [Listeria monocytogenes FSL J2-071]
 gi|293591437|gb|EFF99771.1| ATP synthase subunit alpha 2 [Listeria monocytogenes J2818]
 gi|307572058|emb|CAR85237.1| ATP synthase F1, alpha subunit [Listeria monocytogenes L99]
 gi|313612671|gb|EFR86697.1| ATP synthase F1, alpha subunit [Listeria marthii FSL S4-120]
          Length = 504

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V   G ++ I         L      G+ +         +G    
Sbjct: 10  SIIKQQIENYHSELKVSDVGTVTYIGDGIARAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   G+   +       GRV+N+LG+P+DG   + +  
Sbjct: 66  LETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEALIGRVVNSLGQPVDGLGPI-ETT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +  P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 GTRPIEAVAPGVMQRQSVNEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     I   +G++   VR  +E       L  ++VV A + +   L  +AP   V 
Sbjct: 185 NQADQDMICIYVAIGQKESTVRNAVETLRHHGALDYTIVVTAAASQPAPLLYLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDSLGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K +  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKTVAGTLRLDLAAYRELE---SFSQFGSDLDAATRAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QDLH 425


>gi|284049044|ref|YP_003399383.1| ATP synthase F1, alpha subunit [Acidaminococcus fermentans DSM
           20731]
 gi|283953265|gb|ADB48068.1| ATP synthase F1, alpha subunit [Acidaminococcus fermentans DSM
           20731]
          Length = 618

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/428 (22%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  + + + + + + G +  +     T T L   +  G+ V     +    G V  
Sbjct: 120 AALTQGVQSFHEGVDLEEIGVVEKVGDGICTATGLGGAMS-GELV---ALHDGVYGMVQN 175

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GDLV   G    I       GR+++ LG+P+DG  ++ K  
Sbjct: 176 LRENEVGIVLLGGATEIKEGDLVRRTGEIMEIPVGEAMLGRIVDPLGQPLDGKGAI-KTC 234

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  + P    RQ V+   +TG++ +D   P+  GQR  +    G GK+ +      
Sbjct: 235 ARYPIEHQAPGIAARQPVDVPLQTGLKAVDALVPIGRGQRELIIGDRGTGKTAIAVDTIL 294

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V      +        +++V AT+ ++  ++ +AP     
Sbjct: 295 NQKGKDVICIYVAIGQKASSVARLSHTFEQYGAADYTMIVAATAADTAPMQYLAPYAGAA 354

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 355 VGEYFMDQGKDVLIVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERACRR 414

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 415 NEQHGGGSMTALPIIETQAGDVSGYIPTNVISITDGQIYLETDLFNSGVRPALNSGLSVS 474

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K +  +L   + ++ E   +     +   +D      + +   + + LK
Sbjct: 475 RVGGAAQTKAMKSVAGTLRLSLAQYRE---LAAFAQFGSDLDRETKAQLDRGARVTEMLK 531

Query: 419 QSPSDLSS 426
           Q      S
Sbjct: 532 QGQYQPLS 539


>gi|220936462|ref|YP_002515361.1| H(+)-transporting two-sector ATPase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254808122|sp|B8GRC0|ATPA_THISH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219997772|gb|ACL74374.1| H(+)-transporting two-sector ATPase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 513

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 102/448 (22%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +    +          G + S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNPTEISELIKKRIASYDAAAQARTEGTVVSLSDGIVRLHGLAD-VMQGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  + I  GD     GR   +       GRV+N+LG  +D
Sbjct: 58  -NTYGLALNLERDSVGAVVLGDYKHIKEGDTARCTGRILEVPVGEALLGRVVNSLGMAVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++    L+  I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGAIDTS-LTSPIEKIAPGVIERQSVDQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   VG++   +   +         + +++V AT+ ES  ++
Sbjct: 176 TAVAVDAIINQKGTGVKCIYVAVGQKASSIANVVTKLEQHGALEHTIIVAATASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G + L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYAGCAMGEYFRDRGQDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGVRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D +  K + +   + + +KQ      S
Sbjct: 413 LDELTRKQLERGKRVTELMKQGQFSPMS 440


>gi|118586238|ref|ZP_01543698.1| ATP synthase, alpha subunit [Oenococcus oeni ATCC BAA-1163]
 gi|118433322|gb|EAV40028.1| ATP synthase, alpha subunit [Oenococcus oeni ATCC BAA-1163]
          Length = 520

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 178/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +       + L+  V  G+ V  +       G    
Sbjct: 10  SLIKQQLEKYDSTLKIDEVGTVTYVGDGVARASGLA-NVMSGELVEFENG---VYGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  + IS GD V   G+   +       GRV+NALG+PIDG+ ++ K  
Sbjct: 66  LEESEVGIIVLGDFDGISQGDTVKRTGKVMEVPVGDEMIGRVVNALGQPIDGNGAI-KTK 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  +  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 HTRPVEFKAPGVMQRKSVFEPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D    V+   +G++   VR  +E          ++VV A   E   +  +AP     
Sbjct: 185 NQKDQDMIVVYVAIGQKDSTVRTQVETLREMGALDYTIVVSAGPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 LGEYFMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLDADQFYSGNRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + L 
Sbjct: 365 RVGGDAQIKAMKKVSGTLRLDLASYHELE---AFAQFGSDLDAPTQAKLARGRRTVEVLN 421

Query: 419 QSPSDL 424
           Q     
Sbjct: 422 QPLHQP 427


>gi|34581170|ref|ZP_00142650.1| ATP synthase alpha chain [Rickettsia sibirica 246]
 gi|28262555|gb|EAA26059.1| ATP synthase alpha chain [Rickettsia sibirica 246]
          Length = 510

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/435 (24%), Positives = 182/435 (41%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVITVGDGIAQIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVGAVIMGDDNQVQQGDNVKRTKAVLEVPVGNALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTLIVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +EKG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEEKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 VRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFGSDLDPATKAQ 417

Query: 407 VHQVPIIYDFLKQSP 421
           +     + + LKQ+ 
Sbjct: 418 IDHGKRLVEILKQAQ 432


>gi|306773414|emb|CBJ55283.1| putative alpha subunit of ATP synthase [Alsophila havilandii]
 gi|306773420|emb|CBJ55286.1| putative alpha subunit of ATP synthase [Alsophila tricolor]
          Length = 490

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V   P G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + + ++        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGKNVICVYVAIGQKASSVAQVVNNFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKQHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SLQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|89112878|gb|ABD61051.1| ATPase alpha subunit [Coffea arabica]
          Length = 431

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|224543578|ref|ZP_03684117.1| hypothetical protein CATMIT_02787 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523505|gb|EEF92610.1| hypothetical protein CATMIT_02787 [Catenibacterium mitsuokai DSM
           15897]
          Length = 511

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 111/442 (25%), Positives = 191/442 (43%), Gaps = 21/442 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             + ++ L ++  K+          G + ++      V  L     LG+ ++  G   D 
Sbjct: 7   RPDEISALIKEQIKHYDDVMEQKDVGTVMTVGDGVSVVHGL-DNAMLGELILFPG---DV 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
            G V+ ++ D V +  +G  +EI  GD V   G+   +       GRV+N LG+PIDG  
Sbjct: 63  YGMVMNLDEDSVGVTLLGNADEIKEGDEVRRTGKIIEVPVGDAMLGRVVNPLGQPIDGQG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +     +  I    P  M R+ V++  +TGI  ID   P+  GQR  +      GK+ +
Sbjct: 123 EIITTK-TRPIERVAPGVMTRKSVDQPVQTGITTIDAIIPVGRGQRELIIGDRQTGKTAI 181

Query: 178 LSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
                 +        I   +G++   V + +E          +VVV A++ E   ++ +A
Sbjct: 182 AVDTIINQKGQNMYCIYVAIGQKNSTVAQVVEKLKKAGAMDYTVVVSASASELAPVQYIA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     IAE +  +G +VL++ D +++ A + R ++      P    YP  VF    RLL
Sbjct: 242 PYAGCAIAEEWLDQGKDVLIVYDDLSKHAVAYRTVSLLLKRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +E   G+ITA+  +     + +  I  +V SI DG I L + L   G  P +D
Sbjct: 302 ERSCRLNEENGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLQQELFNAGFRPAID 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  +L + + ++EE +     G     +D     A+     
Sbjct: 362 TGLSVSRVGSTAQIKAMKQVSRNLKYELAQYEEMQSFAQFG---SDLDAATKNAIEHGER 418

Query: 413 IYDFLKQSPSDLSSEDVFQEIT 434
           + + LKQ+    +  DV  +I 
Sbjct: 419 VREVLKQAQ--YAPRDVIDQII 438


>gi|121719882|ref|XP_001276639.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           clavatus NRRL 1]
 gi|119404851|gb|EAW15213.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           clavatus NRRL 1]
          Length = 557

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 100/432 (23%), Positives = 179/432 (41%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAE-DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q     + +  + + G + S+      V  ++  V   + V      S   G  + 
Sbjct: 56  SILEQRIRGVHEEAGLAETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMN 111

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +   G    +  G+ V   G    +       GRV++ALG PIDG   +    
Sbjct: 112 LEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPINTKA 171

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK      T+L
Sbjct: 172 KSRA-QLKAPGILPRRSVNQPVQTGLKCVDAMVPIGRGQRELIIGDRQTGKTAVALDTML 230

Query: 179 SMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           +    +D           I   VG++   V + ++    ++  K S+VV AT+ E+  L+
Sbjct: 231 NQKRWNDSAVDESKKLYCIYVAVGQKRSTVAQLVQTLEENDAMKYSIVVAATASEAAPLQ 290

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   + E+F   G + ++  D +++ A + R+++      P    YP  VF    
Sbjct: 291 YLAPFTGCAMGEWFRDNGRHAVITYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHS 350

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P
Sbjct: 351 RLLERAAKMNDKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRP 410

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + + +
Sbjct: 411 AINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLAR 467

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 468 GERLTELLKQKQ 479


>gi|22537024|ref|NP_687875.1| F0F1 ATP synthase subunit alpha [Streptococcus agalactiae 2603V/R]
 gi|76787122|ref|YP_329606.1| F0F1 ATP synthase subunit alpha [Streptococcus agalactiae A909]
 gi|76799294|ref|ZP_00781461.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae 18RS21]
 gi|77406456|ref|ZP_00783512.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae H36B]
 gi|77407975|ref|ZP_00784725.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae COH1]
 gi|77410734|ref|ZP_00787093.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae CJB111]
 gi|77414092|ref|ZP_00790260.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae 515]
 gi|81744392|sp|Q8E074|ATPA_STRA5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|109939721|sp|Q3K1J7|ATPA_STRA1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|22533881|gb|AAM99747.1|AE014231_5 ATP synthase F1, alpha subunit [Streptococcus agalactiae 2603V/R]
 gi|76562179|gb|ABA44763.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae A909]
 gi|76585354|gb|EAO61945.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae 18RS21]
 gi|77159844|gb|EAO70987.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae 515]
 gi|77163270|gb|EAO74222.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae CJB111]
 gi|77173433|gb|EAO76552.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae COH1]
 gi|77174925|gb|EAO77738.1| ATP synthase F1, alpha subunit [Streptococcus agalactiae H36B]
 gi|319744884|gb|EFV97218.1| ATP synthase F1 sector alpha subunit [Streptococcus agalactiae ATCC
           13813]
          Length = 501

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  ED+  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIEDFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFSNG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G   EI  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSEIREGDVVKRTGKIMEVPVGEAMIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -ETTATRPVETPAPGVMQRKSVFEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     K++  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGAAQIKAMKRVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPLH 425


>gi|325288781|ref|YP_004264962.1| type III secretion system ATPase, FliI/YscN [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324964182|gb|ADY54961.1| type III secretion system ATPase, FliI/YscN [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 437

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 169/434 (38%), Positives = 244/434 (56%), Gaps = 11/434 (2%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            LA   +D     V   G +S +T +          V +G +       S+   +V+   
Sbjct: 6   NLANKLKDMET--VTALGLVSKVTGLLIEANG--PKVSVGRYCCIVSSKSEIPAEVVGFK 61

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            +   + P+G  E +S GD V     +  +   +   GRV++ LG P++G     K ++ 
Sbjct: 62  DNKTLLMPLGELEGVSPGDKVIPQKEKLAVKVGSELLGRVLDGLGNPLEGRP--LKSNID 119

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + +  P A+ R RV +    G+R +D    +  GQR+G+FAGSG+GKSTLL M AR+ 
Sbjct: 120 YPLQNAPPHALLRPRVSEPLSVGVRSVDGLLTIGRGQRMGIFAGSGVGKSTLLGMMARNT 179

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+LVGERGRE+REFI +D   + + +SV+VVATSD+  ++R  A  TA  IAEY
Sbjct: 180 QADINVIALVGERGRELREFIEKDLGPEGISRSVIVVATSDQPALVRIKAAFTATAIAEY 239

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F   G NVLL++DS+TRFA + RE+    GE P  RGYP SVF+ LP+LLER G +EK  
Sbjct: 240 FRDTGKNVLLMMDSVTRFAMAQREVGLTIGEPPATRGYPPSVFAMLPKLLERAGMAEK-- 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT + +VLVDGD+HN+PIAD+VR ILDGHIVL+R LA    +P +D L SVSR     
Sbjct: 298 GSITGLYTVLVDGDDHNEPIADAVRGILDGHIVLSRDLAARNHFPSIDILQSVSRCMSDV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD- 423
              +   L   +  L+  ++  +D+  IG Y  G +  +D A+  +  I  FL QS  + 
Sbjct: 358 AEPEMIGLAGKVRELLAVYQGAKDLIDIGAYVRGSNAKIDTALKYMEKITLFLCQSTDEK 417

Query: 424 LSSEDVFQEITKKL 437
            +  D+  EI K  
Sbjct: 418 FNGIDMVAEIKKIF 431


>gi|164685584|gb|ABY66738.1| atp1 [Digitalis purpurea]
          Length = 413

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 170/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 399


>gi|288962705|ref|YP_003452999.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
 gi|288914971|dbj|BAI76455.1| flagellum-specific ATP synthase [Azospirillum sp. B510]
          Length = 447

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 186/438 (42%), Positives = 260/438 (59%), Gaps = 7/438 (1%)

Query: 7   TLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIR 64
            LA LA +  +    Q  G + S   +   V  L + + +GD    +  +    L + I 
Sbjct: 3   ALATLAAELDRLPTRQWRGEVRSAAGMTLEVDGLQRVLSVGDKCHAETLRGGRVLCETIG 62

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
                  +      + ++ G   V     F + P   W GRV+NALG+PIDG   L  G+
Sbjct: 63  FRNGRSLLMAFDSLDGVAEGCAAVTDDSAFTLRPGQGWLGRVVNALGEPIDGKGPLANGE 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +    P A  R+RV +   +GIRVID F PLC GQR+GVFAGSG+GKSTLL+M AR
Sbjct: 123 HPRALRQPPPAACARRRVGRRIDSGIRVIDGFVPLCRGQRLGVFAGSGVGKSTLLAMVAR 182

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D ++I L+GERGREVREFI+D LG + L +SVV+VATSDE P++R+ A L  +T+A
Sbjct: 183 HAEADTIVIGLIGERGREVREFIQDDLGPEGLARSVVIVATSDEPPLMRRQAALLTMTVA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI--GPS 300
           E    +G +VL ++DS+TRFA + REI   +GE P A+ YP SVF+ELPRLLER   GP 
Sbjct: 243 EEMRDQGKHVLCLMDSVTRFAMAQREIGLAAGEPPTAKSYPPSVFAELPRLLERAGPGPE 302

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+ITA+ +VLVDGD+H++PIAD+VR ILDGH+VL+R +AE+GRYP V+ L SVSR 
Sbjct: 303 GVGEGDITAIFTVLVDGDDHDEPIADAVRGILDGHLVLDRGIAEQGRYPAVNLLRSVSRS 362

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +E ++V     L   ++  +++  +G Y+ G D   D A+   P + +FL+Q 
Sbjct: 363 LPGCHGVEENRIVGRTRALAATYDGMKEMIRLGAYKRGTDPETDAAIDLHPRLEEFLRQG 422

Query: 421 PSDLS-SEDVFQEITKKL 437
             D S S D F  +   L
Sbjct: 423 KDDPSPSADSFTRLESLL 440


>gi|330443397|ref|NP_009453.2| Atp1p [Saccharomyces cerevisiae S288c]
 gi|307568098|pdb|2XOK|A Chain A, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568099|pdb|2XOK|B Chain B, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568100|pdb|2XOK|C Chain C, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|2447011|dbj|BAA22508.1| F1F0-ATPase alpha subunit precursor [Saccharomyces cerevisiae]
 gi|51013389|gb|AAT92988.1| YBL099W [Saccharomyces cerevisiae]
 gi|151946302|gb|EDN64524.1| F1F0 ATP synthase alpha subunit [Saccharomyces cerevisiae YJM789]
 gi|190408917|gb|EDV12182.1| F1F0-ATPase alpha subunit [Saccharomyces cerevisiae RM11-1a]
 gi|207347937|gb|EDZ73955.1| YBL099Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256271185|gb|EEU06270.1| Atp1p [Saccharomyces cerevisiae JAY291]
 gi|259144745|emb|CAY77684.1| Atp1p [Saccharomyces cerevisiae EC1118]
 gi|323310139|gb|EGA63331.1| Atp1p [Saccharomyces cerevisiae FostersO]
 gi|323356219|gb|EGA88023.1| Atp1p [Saccharomyces cerevisiae VL3]
 gi|329136702|tpg|DAA07026.2| TPA: Atp1p [Saccharomyces cerevisiae S288c]
          Length = 545

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 39  KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 94

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 95  GVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 154

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 155 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 213

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 214 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 273

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 274 SEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 333

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 334 DVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAEL 393

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 394 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 450

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 451 TKQTLVRGERLTQLLKQNQ 469


>gi|319796136|ref|YP_004157776.1| ATP synthase f1, alpha subunit [Variovorax paradoxus EPS]
 gi|315598599|gb|ADU39665.1| ATP synthase F1, alpha subunit [Variovorax paradoxus EPS]
          Length = 537

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 185/445 (41%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--G 53
           MQ N   +++L +   + L     +   G + S+T     V  LS     G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLGVSANIRNEGTVVSVTDGIVRVHGLSD-AMQGEMLEFPPSA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
             + + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGTPSFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +      + I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPINAAMTDV-IEKVAPGVIARKSVDQPMQTGLKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIINQKGQNMTCVYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G + L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K     +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGSSAQTNLIKNQSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQTQ 440


>gi|115396612|ref|XP_001213945.1| ATP synthase alpha chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114193514|gb|EAU35214.1| ATP synthase alpha chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 556

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 95/415 (22%), Positives = 176/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +           K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIN-AKAKSRAQLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 187 SVNQPVQTGMKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   VG++   V + ++    ++  K S++V AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CIYVAVGQKRSTVAQLVKTLEENDAMKYSIIVAATASEAAPLQYLAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + +++ D +++ A + R+++      P    YP  VF    RLLER     ++   G+
Sbjct: 307 GRHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNEKHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQV 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAATKQTLNRGERLTELLKQKQ 478


>gi|241667746|ref|ZP_04755324.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876290|ref|ZP_05249000.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842311|gb|EET20725.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 513

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L   V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKKRIEKFDNSVELKSEGTIVSVADGIVTIYGLDD-VTAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GRGEIETA-HSSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAIDAIINQKGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + +F E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQFRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRSQLNRGQRVTELLKQKQFSTLS 440


>gi|239905117|ref|YP_002951856.1| ATP synthase subunit alpha [Desulfovibrio magneticus RS-1]
 gi|259585425|sp|C4XI08|ATPA_DESMR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|239794981|dbj|BAH73970.1| ATP synthase subunit alpha [Desulfovibrio magneticus RS-1]
          Length = 502

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 167/407 (41%), Gaps = 14/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  + Q     + +   G     +G V+ +  D V +  +G    
Sbjct: 26  SETGTVLSVGDQIARVYGV-QNAMAMELLEFPGG---VMGLVLNLEEDNVGVALLGEDTH 81

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GD V   G+   +       GRVI+ LG PIDG   +   + +  +  K P  + R+
Sbjct: 82  IKEGDPVKRTGKIFSVPVGDAVTGRVIDPLGNPIDGLGPVEAKE-TRNVEIKAPGIIARK 140

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGE 197
            V +   TG++ +D  TP+  GQR  +      GK+ +   ++ A+           +G+
Sbjct: 141 SVHEPMYTGLKAVDAMTPIGRGQRELIIGDRQTGKTAVCIDAILAQKGQGVFCFYVAIGQ 200

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V    E          + ++ AT+ E   L+ M+  +  T+AEY    G   L+I 
Sbjct: 201 KKSTVALVAETLRRHGAMEYTTIISATASEPASLQFMSAYSGCTMAEYHRDNGRAALIIY 260

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A S R+++      P    YP  VF    RLLER          G++TA+  + 
Sbjct: 261 DDLSKQAVSYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGAGSLTALPIIE 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG + L  +L   G  P ++   SVSR+   A     K++  
Sbjct: 321 TQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRPAINVGLSVSRVGGAAQVKAMKQVAG 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +L   + ++ E         +   +D      + +   + + LKQ  
Sbjct: 381 TLRLDLAQYREL---AAFAQFGSDLDKATQLKLSRGMRMVELLKQPQ 424


>gi|325690058|gb|EGD32062.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis
           SK115]
          Length = 501

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDKAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 V-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPIHEPLPVE 431


>gi|212545749|ref|XP_002153028.1| mitochondrial F1 ATPase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
 gi|212545751|ref|XP_002153029.1| mitochondrial F1 ATPase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
 gi|210064548|gb|EEA18643.1| mitochondrial F1 ATPase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
 gi|210064549|gb|EEA18644.1| mitochondrial F1 ATPase subunit alpha, putative [Penicillium
           marneffei ATCC 18224]
          Length = 555

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/428 (23%), Positives = 176/428 (41%), Gaps = 22/428 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  L+  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGLN-NVQAEELVEFA---SGVKGMTMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   L           K P  + R+
Sbjct: 128 VKEGETVRRTGEIVDVPVGPELLGRVVDALGNPIDGKGPLN-TKAKARAQLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    +   D      
Sbjct: 187 SVHEPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDAILNQKRINAGSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP T   + EYF   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDALKYSIIVAATASEAAPLQYLAPFTGTAMGEYFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + +++ D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 307 GRHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQV 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ      S
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQYSPMS 483

Query: 427 EDVFQEIT 434
                 + 
Sbjct: 484 VSEMVPLI 491


>gi|213647283|ref|ZP_03377336.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 433

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|38674625|gb|AAR26330.1| AscN [Aeromonas hydrophila]
          Length = 440

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 159/432 (36%), Positives = 235/432 (54%), Gaps = 11/432 (2%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-- 56
           M  + + +A           L+   G ++ +T        +   V +G+    +  ++  
Sbjct: 1   MNLSFDHIAGQLRHAIDDARLIQIRGRVTQVTGTLLK--AVVPGVRIGELCHLRNPDNTL 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
               +VI        + P+G    IS    V   G   ++       G+V++ LG P  G
Sbjct: 59  SLQAEVIGFAQHQALLTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFAG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L +      +    PP M+R+R+ +    GIR ID       GQR+G+FA +G GKS
Sbjct: 119 -GHLPEPAAWYPVYRDAPPPMSRKRIAQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           TLL+   RS   D  +++L+GERGREVREFIE D   + LKK+V+VVATSD   + R  A
Sbjct: 178 TLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+
Sbjct: 238 GFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLM 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L
Sbjct: 298 ERAGQSDK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVL 355

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+ ++    + +     L   + ++EE   +  IG Y+ G D + D+A+ ++  I 
Sbjct: 356 RSASRVMNQIIEPEHQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIR 415

Query: 415 DFLKQSPSDLSS 426
            +LKQ   + SS
Sbjct: 416 QWLKQGTHEPSS 427


>gi|53802693|ref|YP_112551.1| F0F1 ATP synthase subunit alpha [Methylococcus capsulatus str.
           Bath]
 gi|81683270|sp|Q60CR6|ATPA1_METCA RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|53756454|gb|AAU90745.1| ATP synthase F1, alpha subunit [Methylococcus capsulatus str. Bath]
          Length = 513

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 111/448 (24%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +               G I S+T     +  L Q V  G+ V   G  
Sbjct: 1   MQLNASEISDLIKQRIGKFDLGVESRSEGTIVSLTDGIVRIHGL-QDVMQGEMVEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E +S GD     GR   +       GRV++ALG PID
Sbjct: 58  -NTYGMALNLERDSVGAVVLGSYEHLSEGDTAKCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L   I    P  ++RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GAGPID-AKLFSPIEKIAPGVISRQSVSQPLQTGLKAIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   VG++   +   +         + ++VV A++ ES  L+
Sbjct: 176 TAIAIDAIINQKGTGVKCIYVAVGQKQSSIANVVRKLQEHGAMEHTIVVSASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYAGCAMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRINAEEVERLTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNAGLSVSRVGGAAQTKVIKKLGGGIRLDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + +KQ+     S
Sbjct: 413 LDEATRKQIERGQRVTELMKQNQYSPMS 440


>gi|70983614|ref|XP_747334.1| mitochondrial F1 ATPase subunit alpha [Aspergillus fumigatus Af293]
 gi|66844960|gb|EAL85296.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           fumigatus Af293]
 gi|159123660|gb|EDP48779.1| mitochondrial F1 ATPase subunit alpha, putative [Aspergillus
           fumigatus A1163]
          Length = 556

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 99/431 (22%), Positives = 180/431 (41%), Gaps = 23/431 (5%)

Query: 6   ETLAQLAE-DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q     + +  + + G + S+      V  ++  V   + V      S   G  + 
Sbjct: 56  SILEQRIRGVHEEAGLAETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMN 111

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +   G    +  G+ V   G    +       GRV++ALG PIDG   +    
Sbjct: 112 LEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPINTKA 171

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK       +L
Sbjct: 172 KSRA-QLKAPGILPRRSVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAML 230

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
           +    ++  D       I   VG++   V + ++    ++  K S+VV AT+ E+  L+ 
Sbjct: 231 NQKRWNNSSDESKKLYCIYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQY 290

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   + E+F   G + +++ D +++ A + R+++      P    YP  VF    R
Sbjct: 291 LAPFTGCAMGEWFRDNGRHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR 350

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P 
Sbjct: 351 LLERAAKMNDKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPA 410

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + + + 
Sbjct: 411 INVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLARG 467

Query: 411 PIIYDFLKQSP 421
             + + LKQ  
Sbjct: 468 ERLTELLKQKQ 478


>gi|262283122|ref|ZP_06060889.1| F0F1 ATP synthase subunit alpha [Streptococcus sp. 2_1_36FAA]
 gi|262261374|gb|EEY80073.1| F0F1 ATP synthase subunit alpha [Streptococcus sp. 2_1_36FAA]
          Length = 501

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 183/428 (42%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  +  V + G ++ +         L   +  G+ +V +  +    G
Sbjct: 6   QEISALIKQQIENFQPDFDVTETGVVTYVGDGIARAHGLDNAMS-GELLVFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -ATDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNAGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|218288297|ref|ZP_03492596.1| flagellar protein export ATPase FliI [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241656|gb|EED08829.1| flagellar protein export ATPase FliI [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 441

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 173/405 (42%), Positives = 241/405 (59%), Gaps = 7/405 (1%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93
           T+  +     LG+        S+ LG+VI  +   +Y+ P+G   E+S G  V    R F
Sbjct: 34  TLEVVGPTASLGELCALGRDTSEGLGEVIGFHEGRLYVVPLGPLPEVSPGTPVRFLERQF 93

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           RI       GRV+N LG+PID    L    +   + +     + R R+   + TG+R ID
Sbjct: 94  RIRCGPGLVGRVLNGLGEPIDDRGHLDGPLVWRTVDAPAISPLRRGRISSPYATGVRAID 153

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGD 212
               +  GQR+G+FAGSG+GKSTLLSM AR    D  +I+LVGERGREVREF+ +D   +
Sbjct: 154 ALLTIGRGQRVGLFAGSGVGKSTLLSMMARGGRADVHVIALVGERGREVREFLEDDLGEE 213

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            +++SVV+VATSDE   +R  A   A  IAEYF  +G +V L++DS+TRFA + RE+   
Sbjct: 214 GMRRSVVIVATSDEPAYVRSKASFVATAIAEYFRDEGMHVTLMMDSLTRFAMAEREVGLA 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            GE P +RGY  SVF++LP LLER GP     G ITAV +VLV+GD+ NDPIAD+VR IL
Sbjct: 274 MGEPPSSRGYTPSVFAKLPVLLERAGP--GPVGAITAVYTVLVEGDDLNDPIADAVRGIL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DGHIVL+RSLA  G++P +D L S+SRL       D ++    +   + R+ E  D+  I
Sbjct: 332 DGHIVLSRSLANRGQFPAIDVLQSLSRLFPSIADEDHRRAAERVREWMARYGEIEDLFRI 391

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           G YR G D  +D+A+ ++P I +FL+Q   +      F+E   +L
Sbjct: 392 GAYRQGTDPAVDEAIQRMPEILEFLRQKKGETV---AFEEAITQL 433


>gi|15673748|ref|NP_267922.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281492358|ref|YP_003354338.1| ATP synthase F1 subunit alpha [Lactococcus lactis subsp. lactis
           KF147]
 gi|22653660|sp|Q9CER8|ATPA_LACLA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|12724788|gb|AAK05864.1|AE006406_8 ATP synthase alpha subunit [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281376022|gb|ADA65513.1| ATP synthase F1, alpha subunit [Lactococcus lactis subsp. lactis
           KF147]
 gi|326407253|gb|ADZ64324.1| F-type H+-transporting ATPase subunit alpha [Lactococcus lactis
           subsp. lactis CV56]
          Length = 500

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+++ +  V + G ++ +         L +    G+ V         LG    
Sbjct: 10  SLIKKQIENFTPDFEVAETGVVTYVGDGIARAYGL-ENAMSGELVEFSNG---VLGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G    I  GD V   G+   I       GRV+N LG+P+DG   L  G 
Sbjct: 66  LDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTGK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++      
Sbjct: 126 -TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E       +  ++VV A++ +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKESTVRTQVETLRKLGAMDYTIVVTASASQPSPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +SVS
Sbjct: 305 SDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDEATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|6561705|gb|AAF17049.1|AF197717_1 ATPase alpha subunit [Alisma plantago-aquatica]
          Length = 412

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 174/408 (42%), Gaps = 22/408 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L +    G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLKEIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P   C  GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKCLLGRVVDALGVPIDGKGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERG 199
           + +D   P+  GQR  +      GK+ +          L+  A+ +     +   +G++ 
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNQKAKENDKLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER     +E   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNKGERLTEVLKQPQYEP 400


>gi|55976872|gb|AAV68285.1| F1-ATPase alpha subunit [Pavonia spinifex]
          Length = 419

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVVDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 406


>gi|320354742|ref|YP_004196081.1| ATP synthase F1 subcomplex subunit alpha [Desulfobulbus propionicus
           DSM 2032]
 gi|320123244|gb|ADW18790.1| ATP synthase F1 subcomplex alpha subunit [Desulfobulbus propionicus
           DSM 2032]
          Length = 507

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 97/435 (22%), Positives = 180/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ +D          + + G + S+      V  +     + + +   G  
Sbjct: 1   MQIKAEEISQIIKDQIAGYKADIDLKETGTVLSVGDGIARVYGVENCQAM-ELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V    +G   +I  GD+V   GR   +       GRV++ +G+PID
Sbjct: 59  --IFGLALNLEADNVGCAILGDVRDIKEGDIVKRTGRIAEVPVGPEMEGRVVDGIGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + + +I    P  + R+ V +   TG + +D  TP+  GQR  V     IGK
Sbjct: 117 GKGPISASE-TRKIEVLAPGVIARKSVHEPCYTGAKAVDAMTPVGRGQRELVIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++ A+ +     I   +G++   V   +E          + VV A + +   ++
Sbjct: 176 TALCVDAIIAQKNTDVHCIYVAIGQKKSTVALVVEALRKHGAMEYTTVVAACASDPAPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++      + EYF  KG + L+I D +++ A + RE++      P    YP  +F    
Sbjct: 236 YVSAFAGCAMGEYFRDKGQHALIIYDDLSKQAVAYRELSLLLRRPPGREAYPGDIFFNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERASKVSDALGAGSLTALPIIETQAGDVSAFIPTNVISITDGQVYLEPNLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQVKAMKQVAGTLRLDLAQYRE---LAAFASFGSDLDAATQAQLTR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GERLVEILKQPQYQP 427


>gi|171779636|ref|ZP_02920592.1| hypothetical protein STRINF_01473 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281738|gb|EDT47172.1| hypothetical protein STRINF_01473 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 501

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 177/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIRKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|288553062|ref|YP_003424997.1| flagellum-specific ATP synthase [Bacillus pseudofirmus OF4]
 gi|288544222|gb|ADC48105.1| flagellum-specific ATP synthase [Bacillus pseudofirmus OF4]
          Length = 435

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 242/419 (57%), Gaps = 13/419 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +S +  +   +  +     +G+       +   +    +V+    + V + P+   +E
Sbjct: 20  GKVSRVVGLM--IESIGPVASVGELCYILVGKQNQTRVRAEVVGFRDEYVLLMPLNGIQE 77

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I+ G LV   G    I   +   G+V++  G+ +D    L KG  S    ++ P  + R 
Sbjct: 78  IAPGSLVEATGSPLEIKVGSGLIGKVVDGCGELLD-QQKLPKGLTSFPTDNEPPNPLKRP 136

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+E     G+R ID    +  GQRIG+FAGSG+GKSTLL+M A++   D  +I+L+GERG
Sbjct: 137 RIEHAMSLGVRAIDSLFTVGKGQRIGIFAGSGVGKSTLLAMLAKNSSADLNVIALIGERG 196

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV++FI  D   + L ++++VVATSD+  ++R    +TA  IAEYF ++G +V L++DS
Sbjct: 197 REVKDFIERDLGAEGLSRTILVVATSDQPALMRIKGAMTATAIAEYFRNQGLDVNLMMDS 256

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+   +GE P  +GY  SVF+ LP+LLER G     KG+ITA  +VLVDGD
Sbjct: 257 VTRFAMAQREVGLATGEPPTTKGYTPSVFAMLPKLLERSG--TDAKGSITAFYTVLVDGD 314

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PIAD+VR ILDGH+VL+R LA +G++P ++ L SVSR+     +   K+    +  
Sbjct: 315 DMNEPIADAVRGILDGHLVLDRKLANKGQFPAINVLKSVSRVMSDLVNPIHKQAAERVRK 374

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           LI  +EE  D+  IG Y+ G    +D+A+   P I +FL Q+  +  S   F+E    L
Sbjct: 375 LIATYEEAEDLINIGAYKRGSSKEIDEAIQAYPAIIEFLTQATDERMS---FEESASLL 430


>gi|19745845|ref|NP_606981.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS8232]
 gi|81763189|sp|Q8P1K6|ATPA_STRP8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|19747993|gb|AAL97480.1| putative proton-translocating ATPase, alpha subunit [Streptococcus
           pyogenes MGAS8232]
          Length = 502

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +  +       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFENG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSAIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|116873895|ref|YP_850676.1| F0F1 ATP synthase subunit alpha [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|289435792|ref|YP_003465664.1| ATP synthase F1, alpha subunit [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|315304772|ref|ZP_07874942.1| ATP synthase F1, alpha subunit [Listeria ivanovii FSL F6-596]
 gi|123466612|sp|A0ALL5|ATPA2_LISW6 RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|116742773|emb|CAK21897.1| ATP synthase F1, alpha subunit [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|289172036|emb|CBH28582.1| ATP synthase F1, alpha subunit [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|313626851|gb|EFR95814.1| ATP synthase F1, alpha subunit [Listeria ivanovii FSL F6-596]
 gi|313636293|gb|EFS02097.1| ATP synthase F1, alpha subunit [Listeria seeligeri FSL S4-171]
          Length = 504

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 174/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   L V   G ++ I         L      G+ +         +G    
Sbjct: 10  SIIKQQIENYHSELKVSDVGTVTYIGDGIARAHGL-DNAMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G   EI  GD V   G+   +       GRV+N+LG+P+DG   + +  
Sbjct: 66  LETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEALIGRVVNSLGQPVDGLGPI-ETT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +  P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 GTRPIEAVAPGVMQRQSVNEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            ++D     I   +G++   VR  +E       L  ++VV A + +   L  +AP   V 
Sbjct: 185 NQADQDMICIYVAIGQKESTVRNAVETLRHHGALDYTIVVTAAASQPAPLLYLAPYAGVA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MAEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NDSLGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K +  +L   +  + E         +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKTVAGTLRLDLAAYRELE---SFSQFGSDLDAATRAKLERGKRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QDLH 425


>gi|327403153|ref|YP_004343991.1| ATP synthase F1 subcomplex subunit alpha [Fluviicola taffensis DSM
           16823]
 gi|327318661|gb|AEA43153.1| ATP synthase F1 subcomplex alpha subunit [Fluviicola taffensis DSM
           16823]
          Length = 524

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 105/449 (23%), Positives = 173/449 (38%), Gaps = 36/449 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   S+  + + G +  I      V  L + V  G+ V  +G      G  + +  D
Sbjct: 15  EQLAGFRSEAELQEVGTVLQIGDGIARVYGL-KGVQYGELVEFEGA---LQGIALNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    +  GD V    R   ++      GRV++ LG PIDG   +      M 
Sbjct: 71  NVGVVLLGRSSGVKEGDTVKRLNRIASVNVGEGMVGRVVDTLGNPIDGKGPIAGQLYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P  + RQ V +  +TGI+ ID   P+  GQR  +      GK+T+      +   
Sbjct: 131 IERKAPGVIFRQPVTEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTTVAIDAIINQKE 190

Query: 188 DK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++G  V   ++          +V+V + + +   ++  AP+T  
Sbjct: 191 FYDRGEPVFCIYVAIGQKGSTVAGIVKKLEDAGAMAYTVIVASNASDPAPMQFYAPMTGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I E+F   G   L++ D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEFFRDSGRPALIVFDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
                                 K  G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 IIADDNIASQMNDLPESIKGLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +
Sbjct: 371 GDLFNAGIRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           D      + +     + LKQ   D    +
Sbjct: 428 DAATKSVLDKGARNLEILKQREGDPYPVE 456


>gi|301353354|ref|YP_003795565.1| ATP synthase CF1 alpha subunit [Pteridium aquilinum subsp.
           aquilinum]
 gi|301016272|gb|ADK47559.1| ATP synthase CF1 alpha subunit [Pteridium aquilinum subsp.
           aquilinum]
          Length = 507

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 182/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +  L++ V  G+ V  +      +G    
Sbjct: 12  SIIRKQIEGYVPEVKVVNIGTVLQVGDGIARIHGLNK-VMAGELVESEDG---TVGIAPN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V   P G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 68  LESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSFLGRVVNALAQPIDGKGQIPASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 128 FR-SIESPAPGIISRRSVYEPMQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAVATDTIS 186

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + ++ +        ++VV  T++    L+ +AP T   
Sbjct: 187 NQKGQNVICVYVAIGQKASSVAQVVDTFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 247 LAEYFMYRKQHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHLHSRLLERAAKS 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG   L+  L   G  P ++   SVS
Sbjct: 307 SLQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQTFLSADLFNAGIRPAINVGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++       + +  E         +   +D      + +   + + LK
Sbjct: 367 RVGSAAQIKAMKQVAGKSKLELAQSAELE---AFAQFASDLDKTTQNQLARGQRLREPLK 423

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 424 QSQSAPLSVE 433


>gi|229542493|ref|ZP_04431553.1| ATP synthase F1, alpha subunit [Bacillus coagulans 36D1]
 gi|229326913|gb|EEN92588.1| ATP synthase F1, alpha subunit [Bacillus coagulans 36D1]
          Length = 504

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 176/422 (41%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E+Y   + V   G +  +         L Q    G+ +         +G    + 
Sbjct: 12  IKKQIENYQSEIEVSDVGTVIEVGDGIARAHGLDQ-AMAGELLEFSNG---VMGLAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I  +G   EI  GD V   GR   +       GRV+N LG+P+DG   +     +
Sbjct: 68  ESNVGIIILGPYREIHEGDEVRRTGRIMQVPVGEELIGRVVNPLGQPVDGLGPINTTK-T 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
             I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+   ++  +
Sbjct: 127 RPIESRAPGVMDRKSVSEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAIDTIINQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     I   +G++   VR  +E       L  ++VV A++ +   L+ +AP   V + 
Sbjct: 187 KDQDMICIYVAIGQKESTVRGTVETLRKFGALDYTIVVTASASQPAPLQYLAPYAGVAMG 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 247 EEFMHNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  V     + +  I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 AKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E       G     +D      + +     + LKQ 
Sbjct: 367 GGAAQIKAMKKVSGTLRLDLASYRELESFAQFG---SDLDKATQAKLARGQRTVEVLKQD 423

Query: 421 PS 422
            +
Sbjct: 424 LN 425


>gi|15674806|ref|NP_268980.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes M1 GAS]
 gi|21910033|ref|NP_664301.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS315]
 gi|28896269|ref|NP_802619.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes SSI-1]
 gi|50913942|ref|YP_059914.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS10394]
 gi|56808121|ref|ZP_00365909.1| COG0056: F0F1-type ATP synthase, alpha subunit [Streptococcus
           pyogenes M49 591]
 gi|71903223|ref|YP_280026.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS6180]
 gi|71910392|ref|YP_281942.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS5005]
 gi|94988264|ref|YP_596365.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS9429]
 gi|94992138|ref|YP_600237.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS2096]
 gi|94994059|ref|YP_602157.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS10750]
 gi|209559134|ref|YP_002285606.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes NZ131]
 gi|306827635|ref|ZP_07460915.1| ATP synthase F1 sector alpha subunit [Streptococcus pyogenes ATCC
           10782]
 gi|81679689|sp|Q5XCY2|ATPA_STRP6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81706732|sp|Q7CFA2|ATPA_STRP3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81782496|sp|Q9A0I9|ATPA_STRP1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118573493|sp|Q1JCL5|ATPA_STRPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118573494|sp|Q1JMJ1|ATPA_STRPC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118573496|sp|Q1J7G1|ATPA_STRPF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007218|sp|Q48UD5|ATPA_STRPM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739949|sp|B5XKP9|ATPA_STRPZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|13621936|gb|AAK33701.1| putative proton-translocating ATPase, alpha subunit [Streptococcus
           pyogenes M1 GAS]
 gi|21904223|gb|AAM79104.1| putative putative proton-translocating ATPase alpha subunit
           [Streptococcus pyogenes MGAS315]
 gi|28811520|dbj|BAC64452.1| putative proton-translocating ATPase, alpha subunit [Streptococcus
           pyogenes SSI-1]
 gi|50903016|gb|AAT86731.1| ATP synthase alpha chain [Streptococcus pyogenes MGAS10394]
 gi|71802318|gb|AAX71671.1| ATP synthase alpha chain [Streptococcus pyogenes MGAS6180]
 gi|71853174|gb|AAZ51197.1| ATP synthase alpha chain [Streptococcus pyogenes MGAS5005]
 gi|94541772|gb|ABF31821.1| ATP synthase alpha chain [Streptococcus pyogenes MGAS9429]
 gi|94545646|gb|ABF35693.1| ATP synthase alpha chain [Streptococcus pyogenes MGAS2096]
 gi|94547567|gb|ABF37613.1| ATP synthase alpha chain [Streptococcus pyogenes MGAS10750]
 gi|209540335|gb|ACI60911.1| ATP synthase alpha chain [Streptococcus pyogenes NZ131]
 gi|304430198|gb|EFM33227.1| ATP synthase F1 sector alpha subunit [Streptococcus pyogenes ATCC
           10782]
          Length = 502

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +  +       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFENG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSAIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|323149164|ref|YP_004221993.1| ATP synthase CF1 alpha subunit [Coccomyxa sp. C-169]
 gi|317467220|gb|ADV29841.1| ATP synthase CF1 alpha subunit [Coccomyxa sp. C-169]
          Length = 506

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 105/436 (24%), Positives = 182/436 (41%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y+  + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRQQIEQYNLEVKVVNVGTVFQVGDGIARIYGLEK-VMAGELLEFEDG---TVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GRV+N+L +PIDG   +   +
Sbjct: 67  LESKNVGAVLMGEGLTVQEGTSVRGTGKIAQIPVGDGYLGRVVNSLARPIDGKGEIPSSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESGAPGIISRRSVYEPLQTGLLAVDAMIPIGRGQRELIIGDRQTGKTAVAVDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   + + +           +V+V A +D    L+ +AP T   
Sbjct: 186 NQKGKDVVCVYVAIGQRASSIAQVLNTLQERGAMEYTVIVAAPADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF   G + L I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYNGRHTLAIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 SDKLGGGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSGDIFNAGVRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLRELLK 422

Query: 419 QSP-SDLSSEDVFQEI 433
           Q+  S LS ED    I
Sbjct: 423 QAQASPLSVEDQVASI 438


>gi|164685666|gb|ABY66779.1| atp1 [Cuscuta japonica]
          Length = 410

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/404 (23%), Positives = 170/404 (42%), Gaps = 20/404 (4%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--------SMFARSDCFDKVIISLVGERGR 200
           ++ +D   P+  GQR  +      GK+ +          + +R       +   +G++  
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  SL 
Sbjct: 296 GDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 396


>gi|242820468|ref|XP_002487516.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218713981|gb|EED13405.1| mitochondrial F1 ATPase subunit alpha, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 555

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 98/415 (23%), Positives = 173/415 (41%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  L+  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGLN-NVQAEELVEFA---SGVKGMTMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +           K P  + R+
Sbjct: 128 VKEGETVRRTGEIVDVPVGPELLGRVVDALGNPIDGKGPIN-TKAKARAQLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    +   D      
Sbjct: 187 SVHEPVQTGLKSVDSMVPIGRGQRELIIGDRQTGKTAVALDAILNQKRINATSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CVYVAVGQKRSTVAQLVKTLEENDALKYSIIVAATASEAAPLQYLAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI- 307
           G + ++I D +++ A + R+++      P    YP  VF    RLLER      + G+  
Sbjct: 307 GRHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKHGSGS 366

Query: 308 -TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
            TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQV 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQ 478


>gi|119484592|ref|XP_001262075.1| mitochondrial F1 ATPase subunit alpha, putative [Neosartorya
           fischeri NRRL 181]
 gi|119410231|gb|EAW20178.1| mitochondrial F1 ATPase subunit alpha, putative [Neosartorya
           fischeri NRRL 181]
          Length = 556

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 97/415 (23%), Positives = 175/415 (42%), Gaps = 22/415 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 72  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 127

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   +     S     K P  + R+
Sbjct: 128 VKEGETVKRTGEIVDVPVGPELLGRVVDALGNPIDGKGPINTKAKSRA-QLKAPGILPRR 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    ++  D      
Sbjct: 187 SVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSSDESKKLY 246

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   
Sbjct: 247 CIYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGCAMGEWFRDN 306

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
           G + +++ D +++ A + R+++      P    YP  VF    RLLER      +   G+
Sbjct: 307 GRHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDKHGGGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 367 LTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQV 426

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  SL   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 427 KAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLARGERLTELLKQKQ 478


>gi|296137185|ref|YP_003644427.1| ATP synthase F1, alpha subunit [Thiomonas intermedia K12]
 gi|294341483|emb|CAZ89900.1| Sodium-transporting two-sector ATPase [Thiomonas sp. 3As]
 gi|295797307|gb|ADG32097.1| ATP synthase F1, alpha subunit [Thiomonas intermedia K12]
          Length = 513

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLGASANIRNEGTVVSLTDGIARVHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V +  +G  E+IS GD V   G    +       GRV+N LG PID
Sbjct: 58  -NTFGLALNLERDSVGVVILGPYEQISEGDTVKCTGEILSVPVGPELIGRVVNTLGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L   I    P  + RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVETKQLD-PIEKIAPGVIWRQSVSQPVQTGIKAIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      S        I   +G++   +   +        ++ ++VV A++ +S  ++
Sbjct: 176 TAVAVDSIISQKGKDLICIYVAIGQKASTIANVVRKLQEFGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALVIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEAYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGVSVSRVGGAAQTKIIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + LKQ     + 
Sbjct: 413 LDEATRKQLERGRRVVELLKQPQYQPAQ 440


>gi|149200615|ref|ZP_01877619.1| ATP synthase subunit A [Lentisphaera araneosa HTCC2155]
 gi|149136289|gb|EDM24738.1| ATP synthase subunit A [Lentisphaera araneosa HTCC2155]
          Length = 521

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 98/444 (22%), Positives = 179/444 (40%), Gaps = 32/444 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++        A+ Y      + G + S+      V  L + V  G+ V          G
Sbjct: 14  LKEQFAAFEAGAQTY------ETGKVLSVGDGIARVYGL-ENVMAGELVEFACG---LQG 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G  + I  G  V         P      GRV++ALG PIDG   +
Sbjct: 64  LAMNLEEDNVGVAIFGEDKSICEGMEVKRTNTIASVPTGDALLGRVVDALGNPIDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S  I  K P  M R+ V +  +TG++VID  TP+  GQR  +      GK+TL  
Sbjct: 124 S-TENSRPIEFKAPGIMERKSVHEPLQTGVKVIDALTPVGRGQRELIIGDRKTGKTTLAV 182

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +      +     +G++   V +  E        + + ++ AT+ +   ++ +AP 
Sbjct: 183 DTIINQKGKGVQCFYVAIGQKRSTVVQIAETLKQHGALEYTTIIAATASDPAPMQFLAPY 242

Query: 237 TAVTIAEYFSSKGDNVL------------LILDSITRFAHSIREIATNSGELPVARGYPT 284
           +   +AE++   G                ++ D +T+ + + R+++      P    +P 
Sbjct: 243 SGTAMAEHYCYLGSPTFGGTEGVAGGHALIVYDDLTKQSQAYRQLSLLLRRPPGREAFPG 302

Query: 285 SVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     + +G  +ITA+  +    ++ +  I  +V SI DG I L   L
Sbjct: 303 DVFYTHSRLLERSVKLSESEGAGSITALPIIETQANDVSAYIPTNVISITDGQIFLESDL 362

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G+ P ++   SVSR+   A +   KK   +L   + ++ E   +     +   +D  
Sbjct: 363 FNAGQRPAINAGLSVSRVGGAAQTKSMKKTAGTLRLDLAQYRE---LAAFSQFASDLDPA 419

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS 426
               + +   + +  KQ  ++  S
Sbjct: 420 TRAQLEKGQRLMEVCKQGINEPQS 443


>gi|306773418|emb|CBJ55285.1| putative alpha subunit of ATP synthase [Alsophila pachyrrhachis]
          Length = 490

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V   P G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + + ++        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGKNVICVYVAIGQKASSVAQVVNNFQDRGAMDYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKQHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SLQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|306773416|emb|CBJ55284.1| putative alpha subunit of ATP synthase [Alsophila imrayana]
          Length = 490

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V   P G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + ++        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGQNVICVYVAIGQKASSVAQVVNNFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKQHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SIQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|242624348|ref|YP_003002266.1| ATP synthase CF1 alpha chain [Aureoumbra lagunensis]
 gi|239997456|gb|ACS36978.1| ATP synthase CF1 alpha chain [Aureoumbra lagunensis]
          Length = 504

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 179/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y + + V   G +  +      V  L Q V  G+ +  +      +G  + + 
Sbjct: 13  IRQQIETYDQEIKVDSIGTVLQVGDGIARVYGLDQ-VMAGELLEFEDG---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G  I  G  V   G+  +IS      GRV+N L  PIDG   L +G   
Sbjct: 69  NDNVGAVLMGDGRNILEGSTVRATGKIAQISVPDEIQGRVVNPLATPIDGKGDLPEGSTR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
           + I    P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+   L ++  +
Sbjct: 129 L-IEFMAPGIISRKSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTSIALDTIINQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +      N    +V+V A +D+   L+ +AP T   IA
Sbjct: 188 QSEDVVCVYVAIGQKASSVAQAVTTLKERNALDYTVIVAANADDPATLQYIAPYTGAAIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +G   L+I D +T+ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EHFMYQGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGVRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ+
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLRELLKQA 424

Query: 421 PS 422
            +
Sbjct: 425 QN 426


>gi|293603078|ref|ZP_06685512.1| ATP synthase F1 sector alpha subunit [Achromobacter piechaudii ATCC
           43553]
 gi|292818472|gb|EFF77519.1| ATP synthase F1 sector alpha subunit [Achromobacter piechaudii ATCC
           43553]
          Length = 513

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 186/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASADVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    IS GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NVFGLALNLERDSVGAVILGDYTGISEGDQVKTTGRILEVPVGPELKGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVNAKETDI-IEKVAPGVIARRSVSQPLQTGVKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEDYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|259879889|gb|ACW83615.1| Atp1 [Citrus reticulata]
          Length = 413

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 98/407 (24%), Positives = 171/407 (42%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   VG+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRATSESETLYCVYVAVGQ 175

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     KK+  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKKVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|313884731|ref|ZP_07818487.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620099|gb|EFR31532.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 505

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 109/433 (25%), Positives = 194/433 (44%), Gaps = 16/433 (3%)

Query: 2   QKNLET--LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +K+LE   L Q+ +  + + + + G +  I      V  L +    G+ V     +   +
Sbjct: 3   KKDLEKRLLKQINQFDATHHMEEIGTVVYIGDGIARVHGLDK-AMQGEMVEFPNGS---I 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V  + +D V +   G   +I+ GDLV    +   +       GRV+N LG+PIDG+  
Sbjct: 59  GMVQNLEIDEVGVIVFGDYHDINEGDLVRRLNKVMEVPVGDNLLGRVVNPLGQPIDGEGP 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + + + +  + ++ P  M+RQ V++  +TG + ID   P+  GQR  +      GK+T+ 
Sbjct: 119 I-ETEKTRPVEAEAPSIMDRQSVKRPLQTGTKAIDALVPIGRGQRELIVGDRKTGKTTIA 177

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
             ++  + +     I   +G++   V+  +      D L  ++++ A++ +   L  +AP
Sbjct: 178 IDAIINQKEQDVLCIYVAIGQKESTVKNIVNTLRKYDALDYTIIMSASASQPSSLLYLAP 237

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A  +AE F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLE
Sbjct: 238 YAATAMAEEFMYAGKHVLIIYDDLTKQAAAYREMSLLLKRPPGREAYPGDVFYLHSRLLE 297

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G+IT++  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 298 RSAKLNDELGGGSITSLPIIETQAGDISAYIPTNVISITDGQIFLENDLFNSGVRPAINA 357

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   +  + E         +   +D +  K + +    
Sbjct: 358 GLSVSRVGGAAQVKAMKQVSGTLRIDLAAYRELE---AFSQFGSDLDDMTRKNLDRGKRT 414

Query: 414 YDFLKQSPSDLSS 426
            + LKQS     S
Sbjct: 415 VELLKQSAHKPLS 427


>gi|321315390|ref|YP_004207677.1| flagellum-specific ATP synthase [Bacillus subtilis BSn5]
 gi|320021664|gb|ADV96650.1| flagellum-specific ATP synthase [Bacillus subtilis BSn5]
          Length = 438

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 160/421 (38%), Positives = 234/421 (55%), Gaps = 13/421 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD---NLGQVIRINLDIVYICPVGIG 78
           + G +  +  +   +        +GD  +   K         +V+    + + + P    
Sbjct: 18  RYGKVKRVIGLM--IESKGPASSIGDVCLIYAKGQSGKVIKAEVVGFQEENILLMPYLEA 75

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             I+ G +V   G   R+       G+VI+A G+P+DG   L KG   +      P  M 
Sbjct: 76  ASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LLPKGLSPVSTEQSPPNPMK 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGE
Sbjct: 135 RPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI +D   + LK+S+VVVATSD+  ++R  A  TA  IAEYF  KG NV+ ++
Sbjct: 195 RGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G +E   G ITA  +VLVD
Sbjct: 255 DSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANE--HGTITAFYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+     +       +  
Sbjct: 313 GDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVMSNISTKQHLDAANKF 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + +   + +E    
Sbjct: 373 RELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDEPA---LLEESIAA 429

Query: 437 L 437
           L
Sbjct: 430 L 430


>gi|257457883|ref|ZP_05623042.1| flagellar protein export ATPase FliI [Treponema vincentii ATCC
           35580]
 gi|257444596|gb|EEV19680.1| flagellar protein export ATPase FliI [Treponema vincentii ATCC
           35580]
          Length = 479

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 162/431 (37%), Positives = 242/431 (56%), Gaps = 12/431 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLD 68
           LA       + + G +S +  +   +        +G+      K++    + +VI +N  
Sbjct: 9   LAAVSETEPIKRTGVVSRVQGLL--IESRGPQASVGELCRINLKDNTQSIIAEVIGLNGL 66

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +      + + +G  V   G    +   +   GRV+++LG+  DG        L   
Sbjct: 67  TVQLMTYEDIQGVEIGCEVIASGTTLSVPVGSVLLGRVVDSLGRAADGKQE-PYSPLHYP 125

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I+++ P  + R+ +++   TGIR ID    +  GQRIG+FAGSGIGKSTL+ M AR+   
Sbjct: 126 ILAQPPDPLERRPIKERIVTGIRAIDALLAVGRGQRIGIFAGSGIGKSTLMGMIARNTSA 185

Query: 188 DKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +I+L+GERGREV +F+  D   + LK SVVV ATSD SP+ R     TA  IAEYF 
Sbjct: 186 DVNVIALIGERGREVNDFLEHDLGPEGLKHSVVVTATSDTSPLARIRGAYTATAIAEYFR 245

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +V+L+ DS+TRFA + REI+   GE P  RGY  SVF  LP+LLER G S K  G+
Sbjct: 246 DQGKDVMLLFDSVTRFAKAQREISLAIGEPPATRGYTPSVFEVLPKLLERSGTSAK--GS 303

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT   +VLVDGD+ ++PI+D+VR ILDGHIVLNR LA+ G YP +D L S+SRLA++   
Sbjct: 304 ITGFYTVLVDGDDMDEPISDAVRGILDGHIVLNRKLAQCGHYPAIDVLGSISRLANRVAG 363

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              KK    +  L+  + +  D+  +G Y+ G +  +D+A+     I  FL+Q  +D + 
Sbjct: 364 ECSKKAAQYMRKLMAVYADAEDMIQVGAYQKGSNPAIDEAIDHHDKIETFLQQEVNDPA- 422

Query: 427 EDVFQEITKKL 437
               ++  ++L
Sbjct: 423 --PIEKTLEQL 431


>gi|140325913|gb|ABO86589.1| ATPase alpha subunit [Brassica juncea]
          Length = 507

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 98/441 (22%), Positives = 177/441 (40%), Gaps = 28/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      G V++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGHVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + +  KQ  
Sbjct: 415 AATQALLNRGARLTEVPKQPQ 435


>gi|164685564|gb|ABY66728.1| atp1 [Ailanthus altissima]
 gi|164685608|gb|ABY66750.1| atp1 [Humulus lupulus]
          Length = 413

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|148976416|ref|ZP_01813122.1| flagellum-specific ATP synthase [Vibrionales bacterium SWAT-3]
 gi|145964239|gb|EDK29495.1| flagellum-specific ATP synthase [Vibrionales bacterium SWAT-3]
          Length = 439

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 150/437 (34%), Positives = 238/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M +    L+Q   +  K+  V  G +  +  +    T       +G   + +  +     
Sbjct: 1   MLELANRLSQYKVEGLKSRPVASGKLVRVVGLTLEATG--CKAPIGSLCLVETMSGQMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        I       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGARVTPMTSESGIPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEQRASFSAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  K+SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +T+AEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R +A+ G YP +D   SVS
Sbjct: 298 NGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R   +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RAMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDSAFTLKPKLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q   +    D+   + K
Sbjct: 418 QKMKETVPYDMCVNMLK 434


>gi|46398256|gb|AAS91810.1| AscN [Aeromonas hydrophila]
          Length = 440

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 155/413 (37%), Positives = 230/413 (55%), Gaps = 9/413 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPV 75
            L+   G ++ +T        +   V +G+    +  ++      +VI        + P+
Sbjct: 20  RLIQIRGRVTQVTGTLLK--AVVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTPL 77

Query: 76  GIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    IS    V   G   ++       G+V++ LG P  G   L +      +    PP
Sbjct: 78  GEMFGISSNTEVSPTGTMHQVGVGEHLLGQVLDGLGNPF-GGGHLPEPAAWYPVYRDAPP 136

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            M+R+R+ +    GIR ID       GQR+G+FA +G GKSTLL+   RS   D  +++L
Sbjct: 137 PMSRKRITQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLAL 196

Query: 195 VGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREVREFIE D   + LKK+V+VVATSD   + R  A   A +IAEYF  +G  VL
Sbjct: 197 IGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVL 256

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S+K  G+ITA+ +V
Sbjct: 257 LLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDK--GSITALYTV 314

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++    + +   
Sbjct: 315 LVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQA 374

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +   + ++EE   +  IG Y+ G D + D+A+ ++  I  +L+Q   + SS
Sbjct: 375 GRIRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLRQGTHEPSS 427


>gi|2935537|gb|AAC38612.1| BscN [Bordetella bronchiseptica]
          Length = 444

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 149/427 (34%), Positives = 230/427 (53%), Gaps = 12/427 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLDIVYICPV 75
           + +   G +  +      +  +   V +G+  + +    D    G+V+    D   + P+
Sbjct: 19  STLRIKGRVVQVVGTI--IKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID--GDDSLGKGDLSMEIMSKV 132
           G    IS    V   GR   +       GRV++ LG+P+D      L        + +  
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAESGPLHAHKF-YPVFADA 135

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  ++
Sbjct: 136 PDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVTVV 195

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+  +   +  +KSV+V ATSD+S + R  A   A  IAEYF  +G  
Sbjct: 196 ALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQGQR 255

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +DS+TRFA + REI   +G+ P  RGYP SVF+ LP+L+ER G ++   G+ITA+ 
Sbjct: 256 VLFRMDSVTRFARAQREIGLAAGDPPTRRGYPPSVFATLPKLMERAGMNQT--GSITALY 313

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   K 
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVF 430
           L   +  L+ ++++   +  IG Y+ G D   D+A+ ++  I  FL+Q   +  + ED  
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433

Query: 431 QEITKKL 437
             + + +
Sbjct: 434 LRMAEII 440


>gi|306773422|emb|CBJ55287.1| putative alpha subunit of ATP synthase [Cyathea howeana]
          Length = 490

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V   P G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGQNVICVYVAIGQKASSVAQVVNTFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKRHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SLQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|239826616|ref|YP_002949240.1| flagellum-specific ATP synthase [Geobacillus sp. WCH70]
 gi|239806909|gb|ACS23974.1| ATPase, FliI/YscN family [Geobacillus sp. WCH70]
          Length = 426

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 156/423 (36%), Positives = 233/423 (55%), Gaps = 11/423 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD----NLGQVIRINLDIVYIC 73
           +   + G +S +  +   +        +GD      ++         +V+      V + 
Sbjct: 2   DTYKRFGKVSRVIGLM--IEAKGPESSVGDICYIHTRSGRQKQLIAAEVVGFKEQHVLLM 59

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P    + IS G +V   G+  +I       G+V++ LG P+DG   L KG   + I    
Sbjct: 60  PFSTVQHISPGCIVEATGKPLQIHVGTPLIGQVLDPLGYPLDGS-PLPKGLHPISIERNP 118

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R  + +  + G+R+ID    +  GQR+G+FAGSG+GKSTL+ M AR    D  +I
Sbjct: 119 PNPLARPPINEPIEVGVRIIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNADINVI 178

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREFI  D   + L +S+VVVATSD+  ++R     TA  IAEYF  +G +
Sbjct: 179 ALIGERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRDQGMD 238

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+ ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G S    G ITA  
Sbjct: 239 VMFMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTGTSA--YGTITAFY 296

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ N+PIAD+VR ILDGH +L RSLA  G+YP ++ L SVSR+ +   + + ++
Sbjct: 297 TVLVDGDDMNEPIADTVRGILDGHFILERSLANRGQYPAINVLKSVSRVMNHIITPEHRQ 356

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
               L  L+  +  + D+  IG Y+ G    +D+A+   P I  F KQ   +  ++D   
Sbjct: 357 AADKLRQLLSTYINSEDLINIGAYKRGSSNEIDEAIRYYPKIISFCKQDIHEKITKDESI 416

Query: 432 EIT 434
           E+ 
Sbjct: 417 EML 419


>gi|12659381|gb|AAG60225.1| ATPase alpha subunit [Saururus chinensis]
          Length = 413

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 171/410 (41%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GD+V  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDIAIKEGDIVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILXEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           SL   + ++ E   +     +   +D +    +H+   + + LKQ   + 
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAVTQALLHRGARLTEVLKQPQYEP 402


>gi|238023071|ref|ZP_04603497.1| hypothetical protein GCWU000324_02995 [Kingella oralis ATCC 51147]
 gi|237865454|gb|EEP66594.1| hypothetical protein GCWU000324_02995 [Kingella oralis ATCC 51147]
          Length = 515

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 112/448 (25%), Positives = 192/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   + L  +      G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQINPAEISDLLKAKIEKLNTRAEEKTRGTVISVTDGIVRVYGLSD-VMQGEMLEFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S+  G  + +  D V    +G  E I  GD V   GR    P      GRV+NALG+PID
Sbjct: 57  SNTFGLAMNLERDSVGAVVLGEYEHIKEGDEVKCTGRILEVPIGRELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + D     I   VG++   V   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKDTGVICIYVAVGQKASSVANVVRQLEQHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINADEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +    ++ + +KQ   +  S
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQFNTLS 440


>gi|145588213|ref|YP_001154810.1| F0F1 ATP synthase subunit alpha [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|189081308|sp|A4SUT2|ATPA_POLSQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145046619|gb|ABP33246.1| ATP synthase F1 subcomplex alpha subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 513

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +     +     V   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELIKSRISEMGVDSQVRNEGTVISVTDGICRVHGLS-GVMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + +G  + +  D V    +G    I  GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTIGLALNLERDSVGAVVLGEYTHIKEGDPVKCTGRILEVPVGPELLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTKLTDF-IEKVAPGVIARQSVSQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +        ++ +VVV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKGVYCVYVAIGQKASTIANVVRKLTELGAMEYTVVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +   + +  KQ+ 
Sbjct: 413 LDEATRKQLERGRRVTELCKQAQ 435


>gi|306773428|emb|CBJ55290.1| putative alpha subunit of ATP synthase [Sphaeropteris glauca]
          Length = 490

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 106/430 (24%), Positives = 183/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVLMGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGQNVICVYVAIGQKASSVAQVVNTFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKQHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SIQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|55820565|ref|YP_139007.1| F0F1 ATP synthase subunit alpha [Streptococcus thermophilus LMG
           18311]
 gi|55822455|ref|YP_140896.1| F0F1 ATP synthase subunit alpha [Streptococcus thermophilus
           CNRZ1066]
 gi|116627374|ref|YP_819993.1| F0F1 ATP synthase subunit alpha [Streptococcus thermophilus LMD-9]
 gi|81676598|sp|Q5M106|ATPA_STRT1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81676747|sp|Q5M5J3|ATPA_STRT2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122268025|sp|Q03LX5|ATPA_STRTD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|55736550|gb|AAV60192.1| H+-translocating ATPase alpha subunit [Streptococcus thermophilus
           LMG 18311]
 gi|55738440|gb|AAV62081.1| proton-translocating ATPase, alpha subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116100651|gb|ABJ65797.1| F0F1-type ATP synthase, alpha subunit [Streptococcus thermophilus
           LMD-9]
 gi|312277887|gb|ADQ62544.1| ATP synthase subunit alpha [Streptococcus thermophilus ND03]
          Length = 501

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---VFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+PIDG   +
Sbjct: 62  MAQNLESNDVGIIILGDFYTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPIDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
            K   +  + +  P  M R+ V +  +TG++ +D   P+  GQR  +      GK+   +
Sbjct: 122 -KTTATRPVEAPAPGVMQRKSVSEPLQTGLKAVDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  +       I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDVICIYVAIGQKESTVRTQVESLRKHGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKLSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPLH 425


>gi|119389904|pdb|2HLD|A Chain A, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389905|pdb|2HLD|B Chain B, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389906|pdb|2HLD|C Chain C, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389913|pdb|2HLD|J Chain J, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389914|pdb|2HLD|K Chain K, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389915|pdb|2HLD|L Chain L, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389922|pdb|2HLD|S Chain S, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389923|pdb|2HLD|T Chain T, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389924|pdb|2HLD|U Chain U, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|224510808|pdb|3FKS|A Chain A, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510809|pdb|3FKS|B Chain B, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510810|pdb|3FKS|C Chain C, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510817|pdb|3FKS|J Chain J, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510818|pdb|3FKS|K Chain K, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510819|pdb|3FKS|L Chain L, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510826|pdb|3FKS|S Chain S, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510827|pdb|3FKS|T Chain T, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510828|pdb|3FKS|U Chain U, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|300193115|pdb|2WPD|A Chain A, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193116|pdb|2WPD|B Chain B, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193117|pdb|2WPD|C Chain C, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|306991949|pdb|3OE7|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991950|pdb|3OE7|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991951|pdb|3OE7|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991958|pdb|3OE7|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991959|pdb|3OE7|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991960|pdb|3OE7|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991967|pdb|3OE7|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991968|pdb|3OE7|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991969|pdb|3OE7|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306992003|pdb|3OEH|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992004|pdb|3OEH|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992005|pdb|3OEH|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992012|pdb|3OEH|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992013|pdb|3OEH|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992014|pdb|3OEH|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992021|pdb|3OEH|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992022|pdb|3OEH|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992023|pdb|3OEH|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
          Length = 510

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 4   KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 60  GVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 120 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 178

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 179 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 239 SEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 299 DVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAEL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 359 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 415

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 416 TKQTLVRGERLTQLLKQNQ 434


>gi|260222686|emb|CBA32492.1| ATP synthase subunit alpha 1 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 517

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 103/450 (22%), Positives = 186/450 (41%), Gaps = 29/450 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +     L     +   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIDGLSASADIRNQGTVVSVTDGICRIHGLSD-VMQGEMLEFPAGS 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
                 G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGLPTYGLALNLERDSVGSVILGEYEHISEGDTVKCTGRILEVPVGPELRGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + R+ V +  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARESVSQPMQTGLKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   V+  +           ++VV AT+ ES  
Sbjct: 179 GKTAVAIDAIINQKGQNMTCVYVAIGQKASSVKNVVRALEQAGAMEYTIVVAATASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLVKNLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +D    K + +   + + LKQ+     +
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQAQYSPLT 445


>gi|69214348|gb|AAZ03782.1| ATP synthase alpha chain [Ginkgo biloba]
 gi|125634698|gb|ABN48507.1| ATPase [Ginkgo biloba]
          Length = 510

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y++ + V   G +  +      +  L + V  G+ V         +G    
Sbjct: 11  SIIRKQIEQYNQEVEVANIGTVLRVGDGIARIHGLDE-VMAGELVEFVDG---TVGIAPN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LESNDVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGRGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  + R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 SRL-IESSAPGIILRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTII 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +           ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKGQDVICVYVAIGQKASSVAQVVNTSQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  +  +I D  ++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYQEQHTPIIYDDPSKQARAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P +D   SVS
Sbjct: 306 SSQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIQPAIDVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|50058605|gb|AAT69055.1| F1-ATPase alpha subunit [Jacquemontia tamnifolia]
          Length = 429

 Score =  306 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV+ ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGXAXLGRVVXALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|157692303|ref|YP_001486765.1| flagellum-specific ATP synthase [Bacillus pumilus SAFR-032]
 gi|157681061|gb|ABV62205.1| flagellum-specific ATP synthase [Bacillus pumilus SAFR-032]
          Length = 438

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 165/441 (37%), Positives = 244/441 (55%), Gaps = 13/441 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLG 60
           N++ L +  E        + G ++ +  +   +        +GD  +   K         
Sbjct: 2   NIDVLKETIETADP--YKRFGKVNRVVGLM--IESKGPESSIGDVCLIHKKGRKHDPIKA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + + + P      IS G LV   G   ++       G V++A G+P+DG   L
Sbjct: 58  EVVGFRDEHILLMPYVEASNISPGSLVEATGESLKVKVGTGLIGEVVDAFGEPLDGS-ML 116

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M+R  + +    G+RVID    +  GQRIG+FAGSG+GKSTL+ 
Sbjct: 117 PKGLAPVSTDQSPPNPMDRPPIREKMGVGVRVIDSLLTVGTGQRIGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M A+    D  +I+LVGERGREVREFI +D   + LK+S+VVVATSD+  + R  A  TA
Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGTEGLKRSIVVVATSDQPALTRMKAAYTA 236

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G
Sbjct: 237 TAIAEYFRDRGKNVMFMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFAILPKLLERTG 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 297 TNQL--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSIS 354

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S D K+  +    L+  ++   D+  IG Y+ G    +D A+   P +  FLK
Sbjct: 355 RVMSNIASHDHKEAANRFRQLLSTYQNAEDLINIGAYKKGSSKDIDDAMQAYPHLISFLK 414

Query: 419 QSPSD-LSSEDVFQEITKKLQ 438
           Q   + +S ED    +   + 
Sbjct: 415 QDVEEAVSIEDSVNVLLGLMN 435


>gi|45200825|ref|NP_986395.1| AGL272Cp [Ashbya gossypii ATCC 10895]
 gi|44985523|gb|AAS54219.1| AGL272Cp [Ashbya gossypii ATCC 10895]
          Length = 547

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 103/421 (24%), Positives = 183/421 (43%), Gaps = 22/421 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+      V  L+  V   + V     +S   G  + +    V I   G    +
Sbjct: 66  ETGRVLSVGDGIARVFGLN-NVQAEELVEF---SSGVKGMALNLEPGQVGIVLFGSDRLV 121

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G++V   G+   +       GRV++ALG PIDG  ++ K   +     K P  + R+ 
Sbjct: 122 KEGEVVKRTGKIVDVPVGPEMLGRVVDALGNPIDGKGAI-KASGTSRAQVKAPGILPRRS 180

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    +   D       
Sbjct: 181 VHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNSSNDESKKLYC 240

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + ++     D +K SV+V AT+ E+  L+ +AP TA  I E+F   G
Sbjct: 241 VYVAVGQKRSTVAQLVQTLEQHDAMKYSVIVAATASEAAPLQYIAPFTAAAIGEWFRDNG 300

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L++ D +++ A + R+++      P    YP  VF    RLLER     ++   G++
Sbjct: 301 KHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGGGSL 360

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 361 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 420

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             K++  SL   + ++ E   +     +   +D    + + +   +   L QS     + 
Sbjct: 421 ALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLARGERLTQLLTQSQYSPLAA 477

Query: 428 D 428
           +
Sbjct: 478 E 478


>gi|23099013|ref|NP_692479.1| flagellum-specific ATP synthase [Oceanobacillus iheyensis HTE831]
 gi|22777241|dbj|BAC13514.1| flagellar-specific H(+)-transporting ATP synthase [Oceanobacillus
           iheyensis HTE831]
          Length = 439

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 236/425 (55%), Gaps = 9/425 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ---GKNSDNLGQVIRINLDIVYICP 74
           +   + G +  +  +            +G+    +     +   L +V+    + + + P
Sbjct: 13  DTYKRYGKVIRVVGLMIESEG--PTANIGEVCNIKTSANTDHALLAEVVGFRNEKIILMP 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                E+  G LV   G+   +       G+V+N+LGKP++  + L KG  +       P
Sbjct: 71  YTEVTEVGPGCLVEATGKPLTVKVGRGLVGKVLNSLGKPLNDTEELPKGLANFMTEQTPP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  +    + G++ ID    +  GQR+G+FAGSG+GKSTLL M AR+   +  +I+
Sbjct: 131 NPLERPPIRTPLQVGVKAIDSLLTMGEGQRVGLFAGSGVGKSTLLGMIARNSSAEINVIA 190

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFI  D   + LKKS+VVVATSD+  ++R     TA  I+EYF   G  V
Sbjct: 191 LIGERGREVREFIENDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAISEYFRDLGYKV 250

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
            L++DS+TR A + REI    GE P  +GY  SVFS LP+LLER G +    G IT   +
Sbjct: 251 NLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFSILPKLLERTGTNAN--GTITGFYT 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PIAD+VR ILDGH +L+R LAE G++P ++ L S+SR+ +     + K+ 
Sbjct: 309 VLVDGDDMNEPIADAVRGILDGHFILDRKLAERGQFPAINVLKSISRVMNVIADEEHKEQ 368

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L  L+  +EE +++  IG Y+ G +  +D+A+   P I +FLKQ   +  + D   +
Sbjct: 369 SQTLRKLLSTYEENQELITIGAYKKGTNHEIDQAISFQPYILEFLKQGIHEKRTFDETIQ 428

Query: 433 ITKKL 437
           + K L
Sbjct: 429 MMKNL 433


>gi|322615101|gb|EFY12024.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619942|gb|EFY16815.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622254|gb|EFY19099.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627776|gb|EFY24566.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632879|gb|EFY29623.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636630|gb|EFY33333.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641177|gb|EFY37819.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644888|gb|EFY41421.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650276|gb|EFY46690.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655849|gb|EFY52151.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660175|gb|EFY56414.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665259|gb|EFY61447.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669516|gb|EFY65664.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673442|gb|EFY69544.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677370|gb|EFY73434.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679967|gb|EFY76006.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687439|gb|EFY83411.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194108|gb|EFZ79307.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198589|gb|EFZ83690.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202915|gb|EFZ87950.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208635|gb|EFZ93573.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211171|gb|EFZ96018.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217612|gb|EGA02327.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323218961|gb|EGA03471.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323229414|gb|EGA13537.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232637|gb|EGA16733.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240325|gb|EGA24369.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242686|gb|EGA26707.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323245897|gb|EGA29885.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252461|gb|EGA36308.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323260043|gb|EGA43668.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267193|gb|EGA50678.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
          Length = 433

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVTALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|304312790|ref|YP_003812388.1| Flagellum-specific atp synthase [gamma proteobacterium HdN1]
 gi|301798523|emb|CBL46753.1| Flagellum-specific atp synthase [gamma proteobacterium HdN1]
          Length = 454

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 240/421 (57%), Gaps = 7/421 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDIVYICPVGIGE 79
           V  G +  +     T+  +   V +G   + + ++  D   +V+  + D +++ PV    
Sbjct: 36  VVEGRLQRMVG--LTLEAVGCKVPVGGHCIIRNQDIGDVEAEVVGFSGDKLFLMPVEASL 93

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  GD V  +    R+       GRV++  GKP+DG  +L   +    +  +    + R
Sbjct: 94  GLKPGDRVIPFREVSRVPVGMQLLGRVLDGRGKPLDGKGALDMHNAE-SLQREAINPLQR 152

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
             +      G+R I+    +  GQR+G+FAGSG+GKS LL M  +    D  ++ L+GER
Sbjct: 153 TPISMPLDVGVRAINGLLAVGRGQRMGLFAGSGVGKSVLLGMMTKFTTADITVVGLIGER 212

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREV+EFI +    + LK+SVVV + +DESP++R  A +    IAE+F  +G NVLL++D
Sbjct: 213 GREVKEFIEQILGEEGLKRSVVVASPADESPLMRLRAAVLCTAIAEHFRDQGKNVLLLMD 272

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REIA + GE P  +GYP SVF++LP L+ER G   +  G+ITA  +VL +G
Sbjct: 273 SLTRYAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGREGGGSITAFYTVLTEG 332

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+  DP+ADS R+ILDGHIVL+R+LAEEG+YP +D  AS+SR   +  SA+  K      
Sbjct: 333 DDVQDPVADSARAILDGHIVLSRALAEEGQYPAIDIEASISRAMPQIVSAEHLKKAQGFK 392

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEITKK 436
            L  R++++RD+  +G Y  G D   D A+ ++  +  +L Q  ++    D  F ++ K 
Sbjct: 393 RLYARYQQSRDLISVGAYVKGSDRETDLAISKIAHLKGYLSQGLNEAVPWDAAFGQLQKL 452

Query: 437 L 437
           +
Sbjct: 453 I 453


>gi|2447013|dbj|BAA22509.1| defective F1F0-ATPase alpha subunit precursor [Saccharomyces
           cerevisiae]
          Length = 545

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 39  KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 94

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 95  GVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 154

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 155 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 213

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 214 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 273

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 274 SEAAPLQYLAPFTAASIDEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 333

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 334 DVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAEL 393

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 394 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 450

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 451 TKQTLVRGERLTQLLKQNQ 469


>gi|125624727|ref|YP_001033210.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|146286054|sp|A2RMI4|ATPA_LACLM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|6048351|gb|AAF02206.1|AF059739_6 H+-ATPase cytoplasmic F1-part alpha-subunit [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|15963435|dbj|BAB69469.1| H+-ATPase alpha subunit [Lactococcus lactis subsp. lactis]
 gi|124493535|emb|CAL98516.1| ATP synthase alpha chain [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071524|gb|ADJ60924.1| F0F1 ATP synthase subunit alpha [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 500

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+++ +  V + G ++ +         L +    G+ V         LG    
Sbjct: 10  SLIKKQIENFTPDFEVAETGVVTYVGDGIARAYGL-ENAMSGELVEFSNG---ILGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G    I  GD V   G+   I       GRV+N LG+P+DG   L  G 
Sbjct: 66  LDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTGK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++      
Sbjct: 126 -TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E       +  ++VV A++ +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKESTVRTQVETLRKLGAMDYTIVVTASASQPSPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +SVS
Sbjct: 305 SDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDEATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|157879502|pdb|1OHH|B Chain B, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
          Length = 489

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 177/414 (42%), Gaps = 30/414 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 4   ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 59

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 60  KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKARRRVGLKAPGIIPRIS 118

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 119 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 178

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 179 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 238

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 239 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSL 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 299 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTR 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  ++   + ++ E             +D    + + +   + + LKQ  
Sbjct: 359 AMKQVAGTMKLELAQYREV-----------ALDAATQQLLSRGVRLTELLKQGQ 401


>gi|229551977|ref|ZP_04440702.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus LMS2-1]
 gi|258539391|ref|YP_003173890.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus Lc 705]
 gi|229314712|gb|EEN80685.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus LMS2-1]
 gi|257151067|emb|CAR90039.1| ATP synthase A chain [Lactobacillus rhamnosus Lc 705]
          Length = 509

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y  +L  +  G ++ I       T L +     + +     +    G  + 
Sbjct: 10  SLIKKQLEGYQDDLAAEEVGTVTYIGDGIARATGL-ENAMANELLQFSNGS---YGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  +EI  GD V   GR   +       GRV+N+LG+P+DG  ++ K D
Sbjct: 66  LETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGEAMIGRVVNSLGQPVDGLGTI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEFKAPGVMQRQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   VR  +E          ++V+ A   E   +  +AP     
Sbjct: 185 NQKDQNMICVYVAIGQKDSTVRAQVETLKKYGAMDYTIVLTAGPSEPAPMLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A S RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 305 SDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDAATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPVH 425


>gi|55824788|gb|AAV66476.1| F1-ATPase alpha subunit [Gentiana procera]
          Length = 424

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|313895951|ref|ZP_07829505.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975376|gb|EFR40837.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 458

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 164/420 (39%), Positives = 239/420 (56%), Gaps = 13/420 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDIVYICPVGIGE 79
            G ++ I  +   +      V +G+    +   +       +V+      V + PVG  +
Sbjct: 32  TGKVTQIIGLV--IESQGPTVTVGELCYVRSHFTGMPAVPAEVVGFREGSVLLMPVGEMQ 89

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   GR  R+       GRV++ LG PIDG   +   +    + +  P  ++R
Sbjct: 90  GIGPGCEVTATGRRLRVKVGEELLGRVLDGLGNPIDGKGPILTKE-EYPLQAPPPSPLSR 148

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            R+ +    G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+   D  +I+LVGER
Sbjct: 149 PRISENLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEADISVITLVGER 208

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVR+FI  D   + LK+SVVVVATSD+  ++R    +T   IAEYF  +G  V+L++D
Sbjct: 209 GREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFRDRGHKVVLMMD 268

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G SE   G+IT + +VLVDG
Sbjct: 269 SVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTSE--HGSITGIYTVLVDG 326

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L SVSR+  +    +  +    + 
Sbjct: 327 DDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEVVPKEHLEAAQEMR 386

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  + E  D+  IG Y  G    +D A+ ++  I DFL Q   +++S   +++  ++L
Sbjct: 387 QLMAVYSEAEDLIHIGAYVKGSSPKIDAAIQKIEGINDFLCQDIFEVTS---YEDTERRL 443


>gi|205373376|ref|ZP_03226180.1| flagellum-specific ATP synthase [Bacillus coahuilensis m4-4]
          Length = 441

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 160/417 (38%), Positives = 239/417 (57%), Gaps = 12/417 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV---VHQGKNSDNL--GQVIRINLDIVYI 72
           N   + G +  +  +   +        +GD     + +GK+   +   +V+    D+V +
Sbjct: 14  NSYKRFGRVKRVVGLM--IESQGPESAIGDVCKIHIRKGKSGSQIIKAEVVGFQHDMVLL 71

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P     +I+ G LV   G   ++       G V+++LG P+DG D L KG  S  + + 
Sbjct: 72  MPYSTISDIAPGSLVEGTGEALKVKIGKGLIGSVLDSLGNPLDGSD-LPKGLSSTSVENM 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  + R  + +  + G+R ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  I
Sbjct: 131 PPNPLTRPTISEPLEVGVRAIDTMLTIGKGQRVGIFAGSGVGKSTLLGMIARNTKADINI 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREVREFI  D   + L +S+V+ ATSD+  ++R     TA  IAEYF  +G 
Sbjct: 191 IALIGERGREVREFIERDLGPEGLSRSIVIAATSDQPALMRIKGAFTATAIAEYFRDQGM 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NV+L++DS+TR A + RE+    GE P  +GY  SVF+ LP+LLER G +    G ITA 
Sbjct: 251 NVMLMMDSVTRVAMAQREVGLAVGEPPATKGYTPSVFAILPKLLERTGTN--HLGTITAF 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+ R ILDGHIVL+R +A  G+YP ++ L SVSRL +       K
Sbjct: 309 YTVLVDGDDMNEPIADTTRGILDGHIVLDREIANRGQYPAINILKSVSRLMNHLAENGHK 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  + + +L+  +E++ D+  IG Y+ G    +D+A+   P I  FLKQ   +  S+
Sbjct: 369 ESANKIRNLLSTYEKSEDLINIGAYKKGTSPEIDEAILYFPSILSFLKQGTHEPISQ 425


>gi|299534784|ref|ZP_07048114.1| flagellum-specific ATP synthase [Lysinibacillus fusiformis ZC1]
 gi|298729872|gb|EFI70417.1| flagellum-specific ATP synthase [Lysinibacillus fusiformis ZC1]
          Length = 444

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 168/435 (38%), Positives = 253/435 (58%), Gaps = 14/435 (3%)

Query: 9   AQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-----NLGQV 62
           AQL E         + G ++ +  +   +        +GD      +  +      L +V
Sbjct: 7   AQLIEQIPHIPTFKKFGRVTRVVGLM--IESQGPDSSIGDVCKIHVETVNHGHQIILAEV 64

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    +IV + P     EIS+G LV   G    +       G+V++++G PIDG   L +
Sbjct: 65  VGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPELIGKVLDSMGNPIDGT-LLPR 123

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G +++      P  + R  + +  + G++ ID    + +GQR+G+FAGSG+GKSTLL M 
Sbjct: 124 GLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKSTLLGMI 183

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D  +I+L+GERGREVREFI  D   + L +S+VV ATSD+  ++R     TA  
Sbjct: 184 ARNTQADLNVIALIGERGREVREFIERDLGAEGLSRSIVVAATSDQPALMRIKGAFTATA 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF ++G NV+L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G +
Sbjct: 244 IAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLLERTGTN 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           EK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L SVSRL
Sbjct: 304 EK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVLKSVSRL 361

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +       KK    L  L + ++++ D+  IG Y+ G    +D+A+H  P+I  +LKQ 
Sbjct: 362 MNHVAEPTHKKAAERLRELYYTYDKSEDLINIGAYKRGTSKEIDEAIHYEPLITAYLKQG 421

Query: 421 PSD-LSSEDVFQEIT 434
             D ++ E+   E+ 
Sbjct: 422 YLDKVTLEESVNELI 436


>gi|283853222|ref|ZP_06370474.1| ATP synthase F1, alpha subunit [Desulfovibrio sp. FW1012B]
 gi|283571395|gb|EFC19403.1| ATP synthase F1, alpha subunit [Desulfovibrio sp. FW1012B]
          Length = 502

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 95/414 (22%), Positives = 170/414 (41%), Gaps = 14/414 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  + Q     + +   G      G V+ +  D V +  +G    
Sbjct: 26  SETGTVLSVGDQIARVYGV-QNAMAMELLEFPGG---VKGLVLNLEEDNVGVALLGEDTH 81

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GD V   G    +       GRVI+ LG PIDG   + +      +  K P  + R+
Sbjct: 82  IKEGDPVKRTGTIFSVPVGDAVAGRVIDPLGNPIDGLGPI-EAPEKRNVEIKAPGIIARK 140

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGE 197
            V +   TG++ ID  TP+  GQR  +      GK+ +   ++ A+           +G+
Sbjct: 141 SVHQPMYTGLKAIDAMTPIGRGQRELIIGDRQTGKTAVCLDAILAQKGQGVYCFYVAIGQ 200

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V    E          + ++ AT+ E   L+ +AP +  T+AEY    G + L+I 
Sbjct: 201 KKSTVALVAETLRRYGAMEYTTIISATASEPASLQFIAPYSGCTMAEYHRDNGRHALIIY 260

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A S R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 261 DDLSKQAVSYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDKLGAGSLTALPIIE 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG + L  +L   G  P ++   SVSR+   A     K++  
Sbjct: 321 TQAGDVSAYIPTNVISITDGQVYLEPNLFNAGIRPAINVGLSVSRVGGAAQVKAMKQVAG 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +L   + ++ E         +   +D      +++   + + LKQ      + +
Sbjct: 381 TLRLDLAQYREL---AAFAQFGSDLDKATQLKLNRGMRMVELLKQPQYKPLTVE 431


>gi|315221774|ref|ZP_07863688.1| ATP synthase F1, alpha subunit [Streptococcus anginosus F0211]
 gi|315189160|gb|EFU22861.1| ATP synthase F1, alpha subunit [Streptococcus anginosus F0211]
          Length = 501

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L   +  G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGLDNAMS-GELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDALIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 -KTDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYSGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+ SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDSLFNGGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +    +
Sbjct: 418 EVLKQPVHEPLPVE 431


>gi|1660995|dbj|BAA13613.1| defective F1F0-ATPase alpha subunit precursor [Saccharomyces
           cerevisiae]
          Length = 545

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 189/439 (43%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 39  KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 94

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 95  GVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 154

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 155 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 213

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 214 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 273

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 274 SEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 333

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +++G+   TA+  +   G + +  I  +V SI+DG I L   L
Sbjct: 334 DVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISIIDGQIFLEAEL 393

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 394 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 450

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 451 TKQTLVRGERLTQLLKQNQ 469


>gi|94990143|ref|YP_598243.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes MGAS10270]
 gi|139474052|ref|YP_001128768.1| F0F1 ATP synthase subunit alpha [Streptococcus pyogenes str.
           Manfredo]
 gi|118573495|sp|Q1JHN7|ATPA_STRPD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158512783|sp|A2RFC4|ATPA_STRPG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|94543651|gb|ABF33699.1| ATP synthase alpha chain [Streptococcus pyogenes MGAS10270]
 gi|134272299|emb|CAM30553.1| ATP synthase alpha chain [Streptococcus pyogenes str. Manfredo]
          Length = 501

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +  +       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFENG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSAIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|28899020|ref|NP_798625.1| flagellum-specific ATP synthase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837002|ref|ZP_01989669.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ3810]
 gi|260365234|ref|ZP_05777791.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|260878784|ref|ZP_05891139.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|260897379|ref|ZP_05905875.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|260899938|ref|ZP_05908333.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|4322012|gb|AAD15915.1| polar flagellum-specific ATP synthase FliI [Vibrio
           parahaemolyticus]
 gi|28807239|dbj|BAC60509.1| polar flagellum-specific ATP synthase FliI [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149749775|gb|EDM60520.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ3810]
 gi|308088286|gb|EFO37981.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|308094233|gb|EFO43928.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|308107351|gb|EFO44891.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|308115396|gb|EFO52936.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|328474443|gb|EGF45248.1| flagellum-specific ATP synthase [Vibrio parahaemolyticus 10329]
          Length = 439

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 149/437 (34%), Positives = 236/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ   + L     +      V  G +  +  +    T       +G   + +  +     
Sbjct: 1   MQALADRLKNYKVEGLTTRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMSGHMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +Y+ P      I  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLYLMPSEQITGILPGAKVTPLTSEAGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEHRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDGAFTLKPKLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q   +    D+   + +
Sbjct: 418 QRMKESVPYDMCVNMLR 434


>gi|296313934|ref|ZP_06863875.1| ATP synthase F1, alpha subunit [Neisseria polysaccharea ATCC 43768]
 gi|296839472|gb|EFH23410.1| ATP synthase F1, alpha subunit [Neisseria polysaccharea ATCC 43768]
          Length = 515

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 189/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL     V   G + S+T     +  LS     G+ +   G  
Sbjct: 1   MQLNPAEISDLIKAKIENLSVNAEVRTRGTVVSVTDGIVRIHGLSD-AMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V    R    P      GRV++ALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTSRILEVPIGRELVGRVVDALGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|50308493|ref|XP_454248.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1352026|sp|P49375|ATPA_KLULA RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|899311|emb|CAA55723.1| alpha-subunit of mitochondrial ATP synthase [Kluyveromyces lactis]
 gi|49643383|emb|CAG99335.1| KLLA0E06667p [Kluyveromyces lactis]
          Length = 548

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 103/421 (24%), Positives = 182/421 (43%), Gaps = 22/421 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L+  V   + V     +S   G  + +    V I   G    +
Sbjct: 67  ETGRVLAVGDGIARVFGLN-NVQAEELVEF---SSGVKGMALNLEPGQVGIVLFGSDRLV 122

Query: 82  SLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G++V   G+           GRV++ALG PIDG   +     S     K P  + R+ 
Sbjct: 123 KEGEVVKRTGKIVDVGVGPELLGRVVDALGNPIDGKGPINASGRSRA-QVKAPGILPRRS 181

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    ++  D       
Sbjct: 182 VHEPVQTGLKSVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNNGTDESKKLYC 241

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + ++     D LK S++V AT+ E+  L+ +AP TA  I E+F   G
Sbjct: 242 VYVAVGQKRSTVAQLVQTLEQHDALKYSIIVAATASEAAPLQYIAPFTAAAIGEWFRDNG 301

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER     ++   G++
Sbjct: 302 RHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGGGSL 361

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 362 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 421

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             K++  SL   + ++ E   +     +   +D    + + +   +   LKQ+     + 
Sbjct: 422 ALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLARGERLTQLLKQNQYSPLAA 478

Query: 428 D 428
           +
Sbjct: 479 E 479


>gi|88858105|ref|ZP_01132747.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2]
 gi|88819722|gb|EAR29535.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2]
          Length = 442

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 160/442 (36%), Positives = 247/442 (55%), Gaps = 8/442 (1%)

Query: 1   MQKN--LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           MQ +   + ++Q  +   K      G ++ +  +      +     +G     +  N   
Sbjct: 1   MQNSALPDKISQYQKHIRKVPPAVAGSLTRVVGLTLEARGV--KAPVGSQCQIETLNGFI 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117
             +V+  N D++Y+ P      +  G  V        +       GRV++ LG+PIDG  
Sbjct: 59  DAEVVGFNGDVLYLMPNDALSGVLPGARVIPQVKEAGLPVGMSLLGRVVDGLGRPIDGLG 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +  ++        + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 119 PI-KAEKKLKFAQNAINPLARRAITQPMDVGVRAINAVITVGQGQRMGLFAGSGVGKSVL 177

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ LVGERGREV+EFIE+ LGD   K+SVVV A +D SP++R     
Sbjct: 178 LGMMTRGTSADVIVVGLVGERGREVKEFIEEILGDEGRKRSVVVAAPADASPLMRLKGCE 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TAVTIAEYF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 238 TAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   K +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S
Sbjct: 298 AGNGGKGQGSITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRELADSGHYPAIDIEKS 357

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +  S    +    L  +   +++ +D+  +G Y+ G D ILDK++  +P++  F
Sbjct: 358 ISRVMPQVVSEAHMQQARVLKQVYSLYQQNKDLITLGAYQKGADPILDKSISMMPMVNGF 417

Query: 417 LKQSPSDLSSED-VFQEITKKL 437
           L+Q+  ++   D     + + L
Sbjct: 418 LQQTMKEVIPYDESLSGLARLL 439


>gi|306773430|emb|CBJ55291.1| putative alpha subunit of ATP synthase [Sphaeropteris polypoda]
          Length = 490

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 185/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S C+ GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVLMGDGLTIQEGGSVRATGKIAQIPVSDCFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + +  +        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGQNVICVYVAIGQKASSVAQVVNTFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKQHTLIIHDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SIQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|320535384|ref|ZP_08035498.1| flagellar protein export ATPase FliI [Treponema phagedenis F0421]
 gi|320147786|gb|EFW39288.1| flagellar protein export ATPase FliI [Treponema phagedenis F0421]
          Length = 478

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 166/440 (37%), Positives = 243/440 (55%), Gaps = 12/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DN 58
           M   LE    + ++     +   G ++++  +   V        +G+    +  NS    
Sbjct: 1   MIDMLEKYEAVIQNTEP--IKFTGTVTAVRGML--VESRGPQAVVGELCKIKANNSSDPI 56

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           + +V+ ++   V +      + I LG  V   G    +       GRVINALGK IDG  
Sbjct: 57  MAEVVGLDEGTVKLMSYSDLQGIELGSEVIAEGEILSVPVGDALLGRVINALGKAIDGKQ 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        ++   P  M+R+ + +   TG+R ID    +  GQR+G+F+GSG+GKSTL
Sbjct: 117 EVYSSK-RYPVLQTPPNPMDRKPIRQRIVTGVRAIDSLLAVGCGQRLGIFSGSGVGKSTL 175

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           + M AR+   D  +I+L+GERGREV +FI  D   + LKKSVVV ATSDESP+ R     
Sbjct: 176 MGMIARNTNADVNVIALIGERGREVMDFIEHDLGPEGLKKSVVVTATSDESPLARIRGAY 235

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           TA  IAEYF  +G +V+L+ DS+TRFA + REI   +GE    RGY  SVF  LP+LLER
Sbjct: 236 TATAIAEYFRDQGKDVMLLFDSVTRFAKAQREIGLAAGEPAATRGYTPSVFETLPKLLER 295

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S K  G+IT   +VLVDGD+ ++PI+D+VR I+DGHIVL+R LA+   YP +D L S
Sbjct: 296 SGTSSK--GSITGFYTVLVDGDDLDEPISDAVRGIIDGHIVLSRKLAQRSHYPAIDILNS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRLA +       + V ++   I  +EE+ D+  +G Y+ G    +DKA+     I +F
Sbjct: 354 ISRLAHRVSGRFTNQAVLAMRKSIAIYEESADMIQVGAYQKGSSEEVDKAIALHQPIEEF 413

Query: 417 LKQSPSDLSS-EDVFQEITK 435
           L Q  +D +  E     ++K
Sbjct: 414 LMQEVTDPAPLESTIASLSK 433


>gi|164685646|gb|ABY66769.1| atp1 [Spinacia oleracea]
          Length = 413

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   VG+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESEILYCVYVAVGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|224584074|ref|YP_002637872.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224468601|gb|ACN46431.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 433

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTTGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPEVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|197132386|gb|ACH47711.1| ATP synthase CF1 alpha subunit [Erodium chrysanthum]
          Length = 504

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 101/421 (23%), Positives = 181/421 (42%), Gaps = 15/421 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  + Y + + +V  G +  +      +  L++ V  G+ V  +   +   G  + + 
Sbjct: 13  IRQRIKQYKREVNIVNMGSVLQVGDGIARIYGLNE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   G   +I  S  + GRV+NAL KPIDG   +   +  
Sbjct: 69  STNVGVVLMGGGLMIQEGSSVKATGIIAQIPVSEAYLGRVVNALAKPIDGRGGISASESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +      K ++VV  T+     L+ +AP T   +A
Sbjct: 188 RGKDVICVYVAIGQKASSVAQVVTTFQETGAMKYTIVVAETAASPAALQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 NLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---AFAQFASDLDKTTQNQLARGRRLRELLKQS 424

Query: 421 P 421
            
Sbjct: 425 Q 425


>gi|227892672|ref|ZP_04010477.1| F0F1 ATP synthase subunit alpha [Lactobacillus ultunensis DSM
           16047]
 gi|227865543|gb|EEJ72964.1| F0F1 ATP synthase subunit alpha [Lactobacillus ultunensis DSM
           16047]
          Length = 506

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  V  G+ +     +    G    
Sbjct: 13  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLND-VLAGELLKFDNGS---YGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KAD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            S  I +K P  M+RQ V++  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 128 KSRPIEAKAPGVMDRQSVKQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 188 NQKGQNVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGRDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 308 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 368 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 424

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 425 QPLHDP 430


>gi|291484176|dbj|BAI85251.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 438

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 158/409 (38%), Positives = 230/409 (56%), Gaps = 10/409 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD---NLGQVIRINLDIVYICPVGIG 78
           + G +  +  +   +        +GD  +   K         +V+    + + + P    
Sbjct: 18  RYGKVKRVIGLM--IESKGPASSIGDVCLIYAKGQSGKVIKAEVVGFQEENILLMPYLEA 75

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             I+ G +V   G   R+       G+VI+A G+P+DG   L KG   +      P  M 
Sbjct: 76  ASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LLPKGLSPVSTEQSPPNPMK 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGE
Sbjct: 135 RPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI +D   + LK+S+VVVATSD+  ++R  A  TA  IAEYF  KG NV+ ++
Sbjct: 195 RGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G +E   G ITA  +VLVD
Sbjct: 255 DSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANE--HGTITAFYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+     +       +  
Sbjct: 313 GDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVMSNISTKQHLDAANKF 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             L+  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + +
Sbjct: 373 RELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDEPA 421


>gi|269965702|ref|ZP_06179815.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
 gi|269829770|gb|EEZ84006.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
          Length = 439

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 151/437 (34%), Positives = 237/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ   + L     +      V  G +  +  +    T       +G   + +  +     
Sbjct: 1   MQALADRLKSYKVEGLTTRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMSGQMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGARVTPLTSDAGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDHRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDGAFTLKPKLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           QS  +    D+   + +
Sbjct: 418 QSMKESVPYDMCVNMLR 434


>gi|306773426|emb|CBJ55289.1| putative alpha subunit of ATP synthase [Sphaeropteris aeneifolia]
          Length = 490

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 106/430 (24%), Positives = 184/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +   ++ V  G+ V  +      +G    
Sbjct: 8   SIIRKQIEGYVPEVKVVNIGTVPXVGDGIARIHGPNK-VMAGELVESEDG---TIGIAPN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 64  LESDNVGAVLMGDGLTIQEGGSVRATGKIAQIPVSDSFVGRVVNALAQPIDGKGQIPASE 123

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 124 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 182

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + + ++        ++VV  T++    L+ +AP T   
Sbjct: 183 NQKGQNVICVYVAIGQKASSVAQVVNNFQDRGAMEYTIVVSETANSPATLQYLAPYTGAA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER   S
Sbjct: 243 LAEYFMYRKQHTLIIHDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFHSHSRLLERAAKS 302

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 303 SIQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXIFLSADLFNAGIRPAINVGISVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 363 RVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLK 419

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 420 QSQSAPLSVE 429


>gi|222053605|ref|YP_002535967.1| ATPase FliI/YscN [Geobacter sp. FRC-32]
 gi|221562894|gb|ACM18866.1| ATPase FliI/YscN [Geobacter sp. FRC-32]
          Length = 443

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 155/426 (36%), Positives = 238/426 (55%), Gaps = 9/426 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S   +   G ++ +  +   +        +G       + S+++  +V+    +   + P
Sbjct: 17  SARPIKLHGKVTQVVGLV--IEGFCPETAVGTLCEINSQGSESIPAEVVGFRENKTLLMP 74

Query: 75  VGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G    + LG L+     +  +       GRVI+ LG PID    +  G+    I +   
Sbjct: 75  LGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGAPIDDRGPIITGE-EYPIYATPV 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+
Sbjct: 134 NPMKRRPIRQPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIA 193

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGRE+REFI +D   + LKKSVVVVATSD+ P++R      A TIAEYF ++G  V
Sbjct: 194 LIGERGRELREFIEKDLQAEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKV 253

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G  +   G+IT + +
Sbjct: 254 LLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGNFQN--GSITGLYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+PI+D++RSILDGHIVL+R LA    YPP+D L S SR+     + + +KL
Sbjct: 312 VLVEGDDFNEPISDAMRSILDGHIVLSRELAARNIYPPIDVLNSASRVMMDVTAKNHQKL 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQ 431
             +   ++  + +  D+  IG Y+PG +  +D A+ ++  +  +LKQ   D +  E+   
Sbjct: 372 AGNFKGVLATYRQAEDLINIGAYKPGSNPGIDYALAKIEHMNAYLKQDIKDGVGVENAVM 431

Query: 432 EITKKL 437
           E+    
Sbjct: 432 ELEAIF 437


>gi|228015914|gb|ACP50754.1| ATP synthase CF1 alpha subunit [Pinus ponderosa]
 gi|228016498|gb|ACP51329.1| ATP synthase CF1 alpha subunit [Pinus torreyana subsp. torreyana]
          Length = 507

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGKISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|228016297|gb|ACP51131.1| ATP synthase CF1 alpha subunit [Pinus taeda]
          Length = 503

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGKISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|55824796|gb|AAV66480.1| F1-ATPase alpha subunit [Syringa vulgaris]
          Length = 424

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|205352869|ref|YP_002226670.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272650|emb|CAR37560.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|309243397|gb|ADO51973.1| SsaN [Salmonella enterica subsp. enterica serovar Gallinarum]
 gi|326627941|gb|EGE34284.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 433

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRSHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|306991976|pdb|3OEE|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991977|pdb|3OEE|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991978|pdb|3OEE|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991985|pdb|3OEE|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991986|pdb|3OEE|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991987|pdb|3OEE|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991994|pdb|3OEE|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991995|pdb|3OEE|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991996|pdb|3OEE|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
          Length = 510

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 4   KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 60  GVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 120 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 178

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 179 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 239 SEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 299 DVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAEL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 359 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAASAQFGSDLDAS 415

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 416 TKQTLVRGERLTQLLKQNQ 434


>gi|116333890|ref|YP_795417.1| F0F1-type ATP synthase, alpha subunit [Lactobacillus brevis ATCC
           367]
 gi|122269423|sp|Q03QY6|ATPA_LACBA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116099237|gb|ABJ64386.1| F0F1-type ATP synthase, alpha subunit [Lactobacillus brevis ATCC
           367]
          Length = 513

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 107/425 (25%), Positives = 174/425 (40%), Gaps = 15/425 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   + V+  G ++ +         L+     G+ ++         G V  
Sbjct: 10  ALIKQQLESYQDEISVEETGTVTYVGDGVARAHGLN-NALQGELLLFDNG---VYGMVQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G    I+ GD V   GR   +       GRV+N LG+ IDG   +   D
Sbjct: 66  LEASDVGIVILGDFTGITEGDTVKRTGRIMEVPVGDQLIGRVVNPLGQAIDGKGDIS-TD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GKS   + ++ 
Sbjct: 125 KTRPIEHKAPGVMDRQGVSEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKSSIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR  +        +  ++VV A+  E   +  +AP     
Sbjct: 185 NQKDQDMICIYVAIGQKASTVRAQVSTLEKFGAMDYTIVVTASPSEPAPMLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +T+ A + RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMHNGKHVLIVYDDLTKQADAYRELSLILRRAPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I LN      G  P +D   SVS
Sbjct: 305 NDELGGGSMTALPVIETKAGDVSAYIPTNVISITDGQIFLNSDSFYSGVRPAMDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  ++E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLSAYKELESFAQFG---SDLDAATQARLARGERTVEVLK 421

Query: 419 QSPSD 423
           Q   +
Sbjct: 422 QGLHE 426


>gi|107101129|ref|ZP_01365047.1| hypothetical protein PaerPA_01002161 [Pseudomonas aeruginosa PACS2]
          Length = 429

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 234/419 (55%), Gaps = 12/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G ++ +T        +   V +G+    +  +     L +VI        + P+G    +
Sbjct: 15  GRVTQVTGTLLK--AVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGV 72

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   R++      G+V++ LG+P DG            +    PP M+R+ 
Sbjct: 73  SSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPA-AWYPVYRDAPPPMSRRL 131

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+    G+R ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGR
Sbjct: 132 IERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGR 191

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D     L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+
Sbjct: 192 EVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSL 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G SE  +G+ITA+ +VLV+GD+
Sbjct: 252 TRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSE--RGSITALYTVLVEGDD 309

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++P+AD  RSILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   
Sbjct: 310 MSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREW 369

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + ++EE   +  IG Y+ G D   D+A+ ++  I  +L+Q   + S    + +   +L+
Sbjct: 370 LAKYEEVELLLKIGEYQKGQDSEADRAIEKIAAIRQWLRQGTHETSD---YAQACAQLR 425


>gi|55976880|gb|AAV68289.1| F1-ATPase alpha subunit [Apodanthes caseariae]
          Length = 415

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V          G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGL-KEMKAGEMVEFAXG---VKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKGTGSIVNVPAGKTMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKATSESEKLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N    S+++ AT+ +   L+ +AP +   + EYF     
Sbjct: 177 YVAIGQKRSTVAQLVQILEEANAMEYSILLAATASDPAPLQFLAPYSGCAMGEYFRDNAM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            KK+  SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 MKKVCGSLKLELAQYRE---VTAFAQFGSDLDPATQALLNRGARLTEVPKQPQ 406


>gi|33596839|ref|NP_884482.1| type III secretion system ATPase [Bordetella parapertussis 12822]
 gi|33573540|emb|CAE37531.1| putative ATP synthase in type III secretion system [Bordetella
           parapertussis]
          Length = 444

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 149/427 (34%), Positives = 231/427 (54%), Gaps = 12/427 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLDIVYICPV 75
           + +   G +  +      +  +   V +G+  + +    D    G+V+    D   + P+
Sbjct: 19  STLRIKGRVVQVVGTI--IKAVVPMVKIGEVCLLRNPGEDFEMHGEVVGFVRDAALLTPI 76

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID--GDDSLGKGDLSMEIMSKV 132
           G    IS    V   GR   +       GRV++ LG+P+D      L        + +  
Sbjct: 77  GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAESGPLHAHKF-YPVFADA 135

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+ +    + G+RV+D       GQR+G+FA +G GKSTLL M  +    D  ++
Sbjct: 136 PDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVTVV 195

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+  +   +  +KSV+V ATSD+S + R  A   A  IAEYF  +G  
Sbjct: 196 ALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQGQR 255

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL ++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G ++   G+ITA+ 
Sbjct: 256 VLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITALY 313

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+ N+P+AD  RSILDGHIVL+R L     YP VD LAS SR+ +   S   K 
Sbjct: 314 TVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRHKY 373

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVF 430
           L   +  L+ ++++   +  IG ++ G D   D+A+ ++  I  FL+Q   +  + ED  
Sbjct: 374 LAGRMRELMAKYQDVELLVKIGEHKQGADASTDEAIQKIGQINAFLRQLTDEREAFEDTV 433

Query: 431 QEITKKL 437
             + + +
Sbjct: 434 LRMAEII 440


>gi|257866381|ref|ZP_05646034.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC30]
 gi|257873103|ref|ZP_05652756.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC10]
 gi|257875994|ref|ZP_05655647.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC20]
 gi|257800339|gb|EEV29367.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC30]
 gi|257807267|gb|EEV36089.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC10]
 gi|257810160|gb|EEV38980.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC20]
          Length = 450

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 162/442 (36%), Positives = 236/442 (53%), Gaps = 10/442 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDN 58
           M   L   A      ++      G +S +  +   V  L+  V +G+      Q K    
Sbjct: 1   MTFELPITALRKTAQAQPFFTTYGKVSEVVGLLIKVEGLA--VFIGEICEVALQNKTHTA 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+      V + P+   E I  G LV   G+   +       G  ++ LG+P+D   
Sbjct: 59  LAEVVGFVKKTVLLMPLDQLEGIGPGCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMAL 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L        +    P    RQ++ +   TG+R ID    +  GQRIG+FAGSG+GKSTL
Sbjct: 119 ELESAP-EYPVSQDSPDPFRRQKIAEIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTL 177

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D ++I L+GERGREV+EFI  D   +  +KSVVV ATSD  P++R     
Sbjct: 178 LGMLARYCEADVIVIGLIGERGREVKEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAH 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAEY+  +G  V+L++DS+TRFA + REI  ++GE P  +GY  SVF+ LP+LLER
Sbjct: 238 VATAIAEYYRDQGKKVVLMMDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA  +VLV+GD+ N+PIAD+VR ILDGHI+L+R +A +  YP +D   S
Sbjct: 298 SGMSDK--GSITAFYTVLVEGDDMNEPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL     S ++ K    L   +  + E +D+  IG Y+ G + + D+A+     I  F
Sbjct: 356 LSRLMKTLVSEEQHKHAGELKENMAVYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRF 415

Query: 417 LKQSPSD-LSSEDVFQEITKKL 437
           L+Q   + +  E    E+    
Sbjct: 416 LQQKVDERIPFEQTIFELAHLF 437


>gi|171462851|ref|YP_001796964.1| ATP synthase F1, alpha subunit [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226739923|sp|B1XSD2|ATPA_POLNS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|171192389|gb|ACB43350.1| ATP synthase F1, alpha subunit [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 513

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 181/443 (40%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +     L     V   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELIKSRISELGVDSQVRNEGTVISVTDGICRVHGLS-GVMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + +G  + +  D V    +G    I  GD V   GR   +       GRV++ LG+PID
Sbjct: 58  -NTIGLALNLERDSVGAVVLGEYTHIKEGDPVKCTGRILEVPVGPELLGRVVSVLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTKLTDF-IEKVAPGVIARQSVSQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231
           + +      +        +   +G++   +   +     +  +  ++VV A++ ES  ++
Sbjct: 176 TAVAVDAIINQKGKGVYCVYVAIGQKASTIANVVRKLTENGAIDYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLSAYAGCTMGEYFRDRGEDALIVYDDLTKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGTAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +   + +  KQ+ 
Sbjct: 413 LDEATRKQLERGRRVTELCKQAQ 435


>gi|91223547|ref|ZP_01258812.1| flagellum-specific ATP synthase [Vibrio alginolyticus 12G01]
 gi|91191633|gb|EAS77897.1| flagellum-specific ATP synthase [Vibrio alginolyticus 12G01]
          Length = 439

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 150/437 (34%), Positives = 236/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ   + L     +      V  G +  +  +    T       +G   + +  +     
Sbjct: 1   MQALADRLKSYKVEGLTTRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMSGQMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGARVTPLTSDAGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDHRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+ G D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKSGTDPAIDGAFTLKPKLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           QS  +    D+   + +
Sbjct: 418 QSMKESVPYDMCVNMLR 434


>gi|323191525|gb|EFZ76786.1| flagellum-specific ATP synthase [Escherichia coli RN587/1]
          Length = 446

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 230/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSESS-GSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSPEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             ++      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARAMKQHYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMHEPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|15618617|ref|NP_224903.1| type III secretion system ATPase [Chlamydophila pneumoniae CWL029]
 gi|15836239|ref|NP_300763.1| type III secretion system ATPase [Chlamydophila pneumoniae J138]
 gi|16752333|ref|NP_444591.1| type III secretion system ATPase [Chlamydophila pneumoniae AR39]
 gi|33242065|ref|NP_877006.1| type III secretion system ATPase [Chlamydophila pneumoniae TW-183]
 gi|4377010|gb|AAD18846.1| Yops secretion ATPase [Chlamydophila pneumoniae CWL029]
 gi|6672040|dbj|BAA88657.1| Yop N [Chlamydophila pneumoniae]
 gi|7188979|gb|AAF37934.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila
           pneumoniae AR39]
 gi|8979079|dbj|BAA98914.1| YopN [Chlamydophila pneumoniae J138]
 gi|33236575|gb|AAP98663.1| YopN [Chlamydophila pneumoniae TW-183]
          Length = 442

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 163/444 (36%), Positives = 250/444 (56%), Gaps = 15/444 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           +  + +TL     D   NL    G I+ +  +   +  +   V +G+  + +       +
Sbjct: 4   LTTDFDTLMSQLGDV--NLTTVVGRITEVVGML--IKAVVPNVRVGEVCLVKRNGMEPLV 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--GD 116
            +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID    
Sbjct: 60  TEVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   D +  I    P  ++R ++ +   TG+R ID    +  GQRIG+FAG+G+GKS+
Sbjct: 120 GPLQNVDQTFPIFRAPPDPLHRAKLRQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179

Query: 177 LLSMFARSDC-FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           LL M AR+    D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLL 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D L
Sbjct: 300 ERSGASDK--GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVL 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  + 
Sbjct: 358 ASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREIDFAIDHIDKLN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FLKQ   + ++   ++E  ++L+
Sbjct: 418 RFLKQDIHEKTN---YEEAAQQLR 438


>gi|323703172|ref|ZP_08114825.1| flagellar protein export ATPase FliI [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531831|gb|EGB21717.1| flagellar protein export ATPase FliI [Desulfotomaculum nigrificans
           DSM 574]
          Length = 443

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 159/409 (38%), Positives = 234/409 (57%), Gaps = 9/409 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G ++ +  +   V  +S    +G+    +  G+      +V+        + P+G    I
Sbjct: 26  GMVTRVIGLMIEVQGIS--ARIGEVCDILVDGEPEPVRAEVVGFRDQHSLLMPLGELRGI 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   GR   +       G+V++ LG+P++GD   G+ +    + ++ P  + R+R
Sbjct: 84  YPGSAVVPSGRTLTVKVGEHLRGKVLDGLGRPLEGDIHNGQAE-DFPVDNRPPNPLKRKR 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           ++    TG+R +D       GQRIG+FAGSG+GKSTLL M AR    D  +I L+GERGR
Sbjct: 143 IDTVLPTGVRAVDALLTCGKGQRIGIFAGSGVGKSTLLGMIARHGGADVNVIGLIGERGR 202

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+E+ LG + + KS+VV ATSD+  ++R      A  IAEYF  +G +V+L++DS+
Sbjct: 203 EVLEFLEEDLGPEGMAKSIVVAATSDQPALVRLKGAFVATAIAEYFRDRGLDVMLMMDSV 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + RE+    GE P  +GY  SVF+ LP+LLER G  +   G+ITA  +VLVDGD+
Sbjct: 263 TRFAMAQREVGLAVGEPPATKGYTPSVFALLPKLLERSGMGQN--GSITAFYTVLVDGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PIAD+VR ILDGHIVLNRSLA    YP +D L SVSRL     S + K     +  L
Sbjct: 321 LNEPIADAVRGILDGHIVLNRSLASRNHYPAIDVLQSVSRLMPDIVSEEHKAQAGMVKDL 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +  + +  D+  IG Y  G +  +D A+ +   I +FL+Q P + SS +
Sbjct: 381 LAAYLQAEDLINIGAYVKGSNPKIDAAIAKYDGIINFLRQQPGEFSSYE 429


>gi|251782140|ref|YP_002996442.1| F0F1 ATP synthase subunit alpha [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390769|dbj|BAH81228.1| ATP synthase subunit A [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 501

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 101/422 (23%), Positives = 177/422 (41%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E++  N  V + G ++ I         L   +  G+ +  +       G    + 
Sbjct: 12  IKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFENG---AYGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +      
Sbjct: 68  SNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDIETTGFR 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++      + 
Sbjct: 128 -PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQ 186

Query: 186 CFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   VR  +E          ++VV A++ +   L  +AP   V +A
Sbjct: 187 KGQNMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPYAGVAMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 247 EEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSD 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  +SVSR+
Sbjct: 307 DLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAGSSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  + E         +   +D      +++     + LKQ 
Sbjct: 367 GGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTVEILKQP 423

Query: 421 PS 422
             
Sbjct: 424 LH 425


>gi|27461611|gb|AAM95222.1| ATPase F1 alpha subunit [Thurnia polycephala]
          Length = 417

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 172/408 (42%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAILGRVVDALGLPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +          L+           +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNERGTESETLYCVYVAIG 176

Query: 197 ERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++    G  L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 177 QKRSTVAQLVQILAEGHALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYVHSRLLERAAKRSDQTGAGSLTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVC 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 GSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 401


>gi|163789450|ref|ZP_02183889.1| F0F1 ATP synthase subunit alpha [Carnobacterium sp. AT7]
 gi|159875304|gb|EDP69369.1| F0F1 ATP synthase subunit alpha [Carnobacterium sp. AT7]
          Length = 515

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 171/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +    Y   LV+ + G +S +         L +    G+ +          G    
Sbjct: 10  SLIKKQIASYQSELVIDEVGTVSYVGDGIARAYGL-ENAMSGELLEFADG---TFGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           + ++ V I  +G    I  GD+V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEINDVGIIILGEFTGIREGDIVKRTGRIMQVPVGEAMIGRVVNPLGQPIDGLGEIVTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I ++ P  M+R  V +  +TGI+ ID   P+  GQR  V      GK++L      
Sbjct: 126 -TRPIEAEAPGVMDRHSVNEPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSLAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++V+ A++ +   L  +AP     
Sbjct: 185 NQKGQDTICIYVAIGQKESTVRNQVETLKKHGAMDYTIVMTASASQPAPLLYIAPYAGSA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEEFMYNGKHVLIIFDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P +    SVS
Sbjct: 305 SDKLGGGSMTAIPFVETQAGDISAYIPTNVISITDGQIFLESDLFYSGIRPAIAAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDAATQAKLNRGHRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|89112874|gb|ABD61049.1| ATPase alpha subunit [Eucommia ulmoides]
          Length = 431

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 174/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|15082071|gb|AAK84017.1|AF393838_6 H+-ATPase cytoplasmic F1-part alpha-subunit [Lactococcus lactis
           subsp. lactis]
          Length = 500

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+++ +  V + G ++ +         L +    G+ V         LG    
Sbjct: 10  SLIKKQIENFTPDFEVAETGVVTYVGDGIARAYGL-ENAMSGELVEFSNG---VLGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G    I  GD V   G+   I       GRV+N LG+P+DG   L  G 
Sbjct: 66  LDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTGK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + +K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++      
Sbjct: 126 -TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAIL 184

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +     +I     +G++   VR  +E       +  ++VV A++ +   L  +AP     
Sbjct: 185 NQKGQDMIWIYVAIGQKESTVRTQVETLRKLGAMDYTIVVTASASQPSPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  IA +V SI DG I L   L   G  P +D  +SVS
Sbjct: 305 SDDLGGGSMTALPFIETQAGDISAYIATNVISITDGQIFLENDLFYSGVRPAIDAGSSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGAAQIKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDEATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|312883882|ref|ZP_07743599.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368340|gb|EFP95875.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 459

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 231/434 (53%), Gaps = 12/434 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRIN 66
            Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+   
Sbjct: 29  TQHSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQ 86

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
                + P+G    IS    V   G+   +       G +++ LG+P DG     +    
Sbjct: 87  QHHALLTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGTILDGLGRPFDGTQG-KEPSAW 145

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS 
Sbjct: 146 YPVYRDAPPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSA 205

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +++L+GERGREVREFI  D   + + +SV+VVATSD   + R  A   A +IAEY
Sbjct: 206 DVDVTVLALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEY 265

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  
Sbjct: 266 FRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK-- 323

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++ 
Sbjct: 324 GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQI 383

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + 
Sbjct: 384 VDKSHQTSAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEP 443

Query: 425 SSEDVFQEITKKLQ 438
           S      E   +L+
Sbjct: 444 SE---LVETITQLR 454


>gi|311748675|ref|ZP_07722460.1| ATP synthase F1, alpha subunit [Algoriphagus sp. PR1]
 gi|126577208|gb|EAZ81456.1| ATP synthase F1, alpha subunit [Algoriphagus sp. PR1]
          Length = 524

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 170/442 (38%), Gaps = 36/442 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   ++  + + G +  +      +  LS+    G+ +            V+ +  D
Sbjct: 15  EQLSGARTQAELEEVGTVLQVGDGVARIYGLSK-AQAGELIEFDNG---LKAMVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V     G  +EI  GD V    +   ++      GRV++ LG PIDG   +      M 
Sbjct: 71  NVGAVLFGDSKEIKEGDTVKRTKKIASLNVGEGMLGRVVDTLGNPIDGKGPITGELYDMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC- 186
           +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+ ++     +   
Sbjct: 131 LERKAPGVIYRQPVTEPLQTGIKSIDAMIPIGRGQRELVIGDRQTGKTAVVIDAILNQKE 190

Query: 187 ------FDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V   +     G  L  +VVV A + +   ++  AP T  
Sbjct: 191 FYDRGEAVFCIYVAIGQKASTVANVVAALEKGGALPYTVVVSAAASDPAPMQFFAPFTGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I E+F   G   L++ D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEFFRDTGRPALVVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             K                      G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 INKSDEIASQMNDLPDSIKHLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +
Sbjct: 371 TNLFNSGIRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + + +     + LKQ  
Sbjct: 428 DATTKRTIERGRRNQEILKQPQ 449


>gi|167627184|ref|YP_001677684.1| F0F1 ATP synthase subunit alpha [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189081301|sp|B0TWS5|ATPA_FRAP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167597185|gb|ABZ87183.1| H(+)-transporting two-sector ATPase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 513

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 110/448 (24%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +       +   G I S+     T+  L   V  G+ +   G  
Sbjct: 1   MQLSPSEISGLIKKRIEKFDNSVELKSEGSIVSVADGIVTIYGLDD-VTAGEMIKLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +N D V    +G  E I  GD  +  GR   +       GRV++ALG PID
Sbjct: 58  -DVYGLALNLNTDSVGAVVLGDYEHIKEGDKAYCTGRILEVPVGEALLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GRGEIETA-HSSPIEKIAPGVIWRKSVDQALQTGIKSIDSMVPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + +++V AT+ +S  L+
Sbjct: 176 TAIAIDAIINQKGTGVKCIYVAIGQKASSIANIVRQLEEHGAMEHTIIVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCSMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDISAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   KKL   +   + +F E         +   
Sbjct: 356 ETDLFNSGLRPAINPGNSVSRVGGAAQTKIIKKLGGGIRLALAQFRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +++   + + LKQ      S
Sbjct: 413 LDEATRSQLNRGQRVTELLKQKQFSTLS 440


>gi|308746003|ref|YP_003934543.1| ATP synthase CF1 alpha subunit [Cheilanthes lindheimeri]
 gi|302375436|gb|ADL29810.1| ATP synthase CF1 alpha subunit [Cheilanthes lindheimeri]
          Length = 507

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 106/430 (24%), Positives = 182/430 (42%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y   + VV  G +  +      +  L++ V  G+ V  +      +G    
Sbjct: 12  SIIRKQIEGYVPEMKVVNIGTVLQVGDGIARIHGLNE-VMAGELVESEDG---TVGIASN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
              D V   P G G  I  G  V   G+  +I  S    GRV+NAL +PIDG   +   +
Sbjct: 68  PESDNVGAVPTGDGLTIQEGGSVRATGKIAQIPVSDSSLGRVVNALAQPIDGKGQIPASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 128 FR-SIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 186

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + ++ +        ++VV  T++    L+ +AP T   
Sbjct: 187 NQKGQNVICVYVAIGQKASSVAQVVDTFQERGAMEYTIVVSETANSPATLQYLAPYTGAA 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFHLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 307 SIQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +  E         +   +D      + +   + + LK
Sbjct: 367 RVGSAAQIKAMKQVAGKLKLELAQSAELE---AFAQFASDLDKTTQNQLARGQRLRELLK 423

Query: 419 QSPSDLSSED 428
           QS S   S +
Sbjct: 424 QSQSAPLSVE 433


>gi|330444058|ref|YP_004377044.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila pecorum
           E58]
 gi|328807168|gb|AEB41341.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila pecorum
           E58]
          Length = 442

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 162/434 (37%), Positives = 248/434 (57%), Gaps = 13/434 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDI 69
           +A     NL    G I  +  +   +  +   V +G+  + +    + L  +V+    + 
Sbjct: 12  MARLGDVNLTTVVGRIIEVVGML--IKAVVPNVRVGEVCLVKRHGLEPLVTEVVGFTQNF 69

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSM 126
            ++ P+G    +S    V   G    I       GRV+N LG+PID      L   D + 
Sbjct: 70  AFLSPLGELTGVSPASEVVPTGLPLHIRAGDGLLGRVLNGLGEPIDTEFKGPLVNVDETY 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS+LL M AR+  
Sbjct: 130 PIFCPPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAE 189

Query: 187 -FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A      IAEY
Sbjct: 190 EADINVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEY 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F ++G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLLER G S+K  
Sbjct: 250 FRNQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLERSGASDK-- 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LAS+SRL    
Sbjct: 308 GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAI 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              ++++++     ++ +++    +  IG YR G D  +D A+  +  +  FLKQ   + 
Sbjct: 368 VPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEK 427

Query: 425 SSEDVFQEITKKLQ 438
           ++   ++E  ++L+
Sbjct: 428 TN---YEEAAQQLR 438


>gi|6561702|gb|AAF17046.1|AF197714_1 ATPase alpha subunit [Ranunculus sp. Qiu 95024]
          Length = 401

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD+V   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDIVKRTGSIVDVPAGKAMLGRVVDALGLPIDGKGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRGTSESEILYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++          S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEGKAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER          G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            K++  SL   + ++ E   +     +   +D      +++   + + L
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVL 401


>gi|301059597|ref|ZP_07200509.1| ATP synthase F1, alpha subunit [delta proteobacterium NaphS2]
 gi|300446362|gb|EFK10215.1| ATP synthase F1, alpha subunit [delta proteobacterium NaphS2]
          Length = 480

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 14/414 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      +  + + + + + V   G      G  + +  D V +  +G   +
Sbjct: 2   SETGSVLSVGDGIARIYGIEKAMAM-EMVEFSGG---IFGLCLNLEEDNVGVAIMGDDSK 57

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GD V   GR   I       GRVI+A+G+P+DG   +   + +  I    P  ++RQ
Sbjct: 58  IKEGDTVKRTGRIAEIPVGEAVLGRVIDAVGQPLDGKGPIEATEFNR-IEVVAPGVIDRQ 116

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGE 197
            V +   TGI+ ID  TP+  GQR  +     IGK+ +      +  D     I    G+
Sbjct: 117 SVSEPLYTGIKAIDAMTPVGRGQRELIIGDRQIGKTAICVDAIINQKDTDVYCIYVATGQ 176

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++          + VV A + +    + ++P     I EY+  +G + L+I 
Sbjct: 177 KKSTVAQVVDILEKHGAMEYTTVVAACASDPATQQFISPYAGCAIGEYYRDQGKHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  +F    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQATAYRQVSLLLRRPPGREAFPGDIFYNHSRLLERAAKVNDKLGAGSLTALPIIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG + L  +L   G  P ++   SVSR+   A +   +K+  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQVYLEPNLFFSGVRPAINVGLSVSRVGGAAQTKAMRKVAG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           SL   + +F E       G     +D    K + +   + + LKQ      S +
Sbjct: 357 SLKLDMAQFRELEAFAAFG---SDLDKATLKQLDRGRRLVEILKQPQFQPMSAE 407


>gi|182412243|ref|YP_001817309.1| flagellar protein export ATPase FliI [Opitutus terrae PB90-1]
 gi|177839457|gb|ACB73709.1| flagellar protein export ATPase FliI [Opitutus terrae PB90-1]
          Length = 441

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 171/430 (39%), Positives = 245/430 (56%), Gaps = 10/430 (2%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--NLGQVIRINLDIV 70
           +      V + G ++ +  +   +      V LG+  + +   S+     +V+      V
Sbjct: 16  QVRHLPPVQRLGAVTGVAGLI--IESDGPNVGLGELCLVRSPRSEFTVRAEVVGFREHRV 73

Query: 71  YICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            + P+G    + +G  V    R  +  P     GRV++ALG+P DG   L   D S+   
Sbjct: 74  LLMPLGDATGLHVGCEVAACDRPPLPKPGPEMLGRVLDALGRPYDGLGML-PVDRSVGRD 132

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           +  P  + RQR+   F+TG+R +D FTP   GQR+G+FAGSG+GKSTL+ M AR    D 
Sbjct: 133 ATPPHPLRRQRIHHSFQTGVRALDAFTPFGRGQRLGLFAGSGVGKSTLMGMIARGSEADV 192

Query: 190 VIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           V+++LVGERGREVREFI +D   + LK+++VVVATSD    LR  A  TA  IAE + ++
Sbjct: 193 VVVALVGERGREVREFIEKDLGPEGLKRAIVVVATSDTPAPLRLRAAFTATAIAEAWRAE 252

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G NVL ++DS+TRFA + REI    GE    RGY  SVF+ LPRLLER G  E   G IT
Sbjct: 253 GKNVLFMMDSVTRFAMAQREIGLAVGEPAATRGYTPSVFALLPRLLERTGAGEL--GAIT 310

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+ +VLV+GD+ N+P+AD+VR ILDGH+VL+R+LA    YP +D L SVSRL     + D
Sbjct: 311 ALYTVLVEGDDMNEPVADAVRGILDGHVVLSRALAHFNHYPAIDVLESVSRLIRDVCTPD 370

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-E 427
           E  L +     +  + +  D+  IG Y+ G +  LD+A+     +  FL+Q   + +  E
Sbjct: 371 EVALAAKAREHLALYRKNEDLISIGAYQKGANAALDRAIALHEPLRGFLRQPIEEHTPRE 430

Query: 428 DVFQEITKKL 437
             FQ + K L
Sbjct: 431 QSFQLLKKIL 440


>gi|55976890|gb|AAV68294.1| F1-ATPase alpha subunit [Sapria himalayana]
          Length = 419

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVDGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVLFGSETAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHEXRR-VEVKAPGIIERQSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EXMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIFNQKQMNSKATSESETLSCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATAXDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      ++    + + LKQ  
Sbjct: 357 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNXGARLTEVLKQPQ 406


>gi|168698707|ref|ZP_02730984.1| Flagellar biosynthesis/type III secretory pathway ATPase [Gemmata
           obscuriglobus UQM 2246]
          Length = 430

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 163/424 (38%), Positives = 239/424 (56%), Gaps = 11/424 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICP 74
              L   GG + S+T     +TC +    +GD   +        L +VI    D+ Y+ P
Sbjct: 7   QTPLYRMGGRLKSVTG---RMTC-AIPAAVGDHCAILPRDGEPVLAEVIGFENDLAYLVP 62

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               E +  G  V   G+   +       GRVI+ LG+P+DG   L    L   +    P
Sbjct: 63  FDAAENLQPGMPVLRKGKGLMVPTGKNLLGRVIDGLGRPLDGKGPLADCPLK-PVNRPAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           PAM RQR+ + F TGIR ID       GQR+G+FAGSG+GKSTLL   A+    D  +I+
Sbjct: 122 PAMERQRIREPFVTGIRAIDSVLTCGGGQRVGIFAGSGVGKSTLLGEVAKGSQADVNVIA 181

Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV  F+ED LG + + +SVV+VAT +++ ++R  A  +A+ IA+YF S+  NV
Sbjct: 182 LIGERGREVAPFLEDVLGPEGMARSVVIVATCEQTALMRVRAAQSAIAIADYFRSESQNV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L ++DS+TR A + RE+    GE P +RGY  SVF  L   +ER+G +    G ITA+++
Sbjct: 242 LFVIDSLTRLAMAQRELGLLLGEPPSSRGYTPSVFQTLANTVERLGNAAV--GGITALLT 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDG + ++PIAD VR ++DGHIVL+R +AE G YP +D   S+SR+A      +  K 
Sbjct: 300 VLVDGGDMDEPIADYVRGLVDGHIVLDRKIAERGFYPAIDVSRSISRVATDVVDRESAKA 359

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQ 431
              L  ++    + +D+  IG Y  G+D  +DKA+  +P +  FL+Q   + SS ED   
Sbjct: 360 ARKLRAIMATHADIQDMLRIGAYTRGMDPQVDKALELMPKVEKFLRQDVGERSSFEDTKA 419

Query: 432 EITK 435
            + +
Sbjct: 420 GLLQ 423


>gi|207857079|ref|YP_002243730.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|206708882|emb|CAR33212.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
          Length = 433

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|156144840|gb|ABU52981.1| ATP synthase subunit 1 [Silene latifolia]
          Length = 420

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSPKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQQQ 405


>gi|34539339|gb|AAQ74553.1| F1-ATPase alpha subunit [Ixiolirion tataricum]
          Length = 404

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 99/410 (24%), Positives = 176/410 (42%), Gaps = 21/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SXVKGIALNLEXENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG   L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRXXLXDHE-RRRVEVKXPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK      T+L+    +   +      +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSSSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +S +L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDSAVLQFIAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           SL   + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 402


>gi|237688649|ref|YP_002905265.1| ATP synthase CF1 alpha subunit [Pinus krempfii]
 gi|226951107|gb|ACO94170.1| ATP synthase CF1 alpha subunit [Pinus krempfii]
          Length = 507

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGKISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|168233610|ref|ZP_02658668.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194471045|ref|ZP_03077029.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|238913182|ref|ZP_04657019.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|194457409|gb|EDX46248.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205332335|gb|EDZ19099.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 433

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|199597578|ref|ZP_03211007.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus HN001]
 gi|199591601|gb|EDY99678.1| F0F1 ATP synthase subunit alpha [Lactobacillus rhamnosus HN001]
          Length = 509

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y  +L  +  G ++ I       T L +     + +     +    G  + 
Sbjct: 10  SLIKKQLEGYQDDLAAEEVGTVTYIGDGIARATGL-ENAMANELLQFSNGS---YGMALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  +EI  GD V   GR   +       GRV+N+LG+P+DG  ++  G 
Sbjct: 66  LETNDVGIIILGDFDEIREGDQVKRTGRIMEVPVGEAMIGRVVNSLGQPVDGLGAIKTGK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -TRPIEFKAPGVMQRQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   VR  +E          ++V+ A   E   +  +AP     
Sbjct: 185 NQKDQNMICVYVAIGQKDSTVRAQVETLKKYGAMDYTIVLTAGPSEPAPMLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A S RE++      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATSYRELSLLLRRPPGREAYPGDIFYTHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 305 SDKLGGGSMTALPVIETQAGDISAYIPTNVISITDGQIFLQSDLFYAGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGDAQVKAMKKVAGTLRLDLASFRELE---AFTQFGSDLDAATQAKLNRGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPVH 425


>gi|34539275|gb|AAQ74521.1| F1-ATPase alpha subunit [Dichorisandra thyrsiflora]
          Length = 417

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+         L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARXYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 401


>gi|325917021|ref|ZP_08179260.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325536772|gb|EGD08529.1| Type III secretion system ATPase HrcN protein [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 442

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 164/413 (39%), Positives = 239/413 (57%), Gaps = 9/413 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIG 78
            + G +  +      V  +   V LG+    + ++   L   +V+  +  +  + P G  
Sbjct: 23  RRYGKVVEVIGTMLKVAGV--QVSLGEVCELRQRDGTLLQRAEVVGFSRTLALLAPFGEL 80

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR   +   +   GRV++ LG+P DG   +   +  ++I ++ P  M 
Sbjct: 81  VGLSRETRVIGSGRPLAVPVGSALLGRVLDGLGEPADGQGPVDCEEW-VQIQAQAPDPMR 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ +E+   TG+R++D    L  GQR+G+FA +G+GKSTL+ MFAR    D  +I L+GE
Sbjct: 140 RRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGE 199

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE  LG D L +SVVV ATSD S I R  A      IAEYF  +G  VLL++
Sbjct: 200 RGREVREFIEMILGEDGLARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDQGLRVLLMM 259

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+ITA  +VL +
Sbjct: 260 DSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMGET--GSITAFYTVLAE 317

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            D  +DPIA+ VR ILDGH++L+R +A + +YP +D L S+SR+  +  SA++++    L
Sbjct: 318 DDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLSRVMSQIVSAEQRQYAGQL 377

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             L+ +  E   +  +G YR G D + D+A+ ++  I DFL QS   LS  D 
Sbjct: 378 RRLLAKHNEVETLLQVGEYRQGSDAVADEAIARIDAIRDFLSQSTDQLSDYDT 430


>gi|322411475|gb|EFY02383.1| F0F1 ATP synthase subunit alpha [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 501

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +  +       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFENG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|7620569|gb|AAF64671.1| F1 ATPase alpha subunit [Diphasiastrum digitatum]
          Length = 413

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GD+V  
Sbjct: 1   GDGIARVYGLNK-IQAGELVEFA---SGVKGMALNLENENVGIVIFGSDTAIKEGDIVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPIDGKGALNAVE-RRRVEVKAPGIIARKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK      T+L+    +            +   +G+
Sbjct: 116 LKAVDSPVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINAQGTSDSEKLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++        + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVKILSEAGALEYSIIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ + + R+++      P    +P  VF    R LER          G++TA+  + 
Sbjct: 236 DDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYPHSRSLERAAKMSDRTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATRYLLNRGARLTEVLKQPQ 399


>gi|209965046|ref|YP_002297961.1| flagellum-specific ATP synthase [Rhodospirillum centenum SW]
 gi|209958512|gb|ACI99148.1| H+-transporting two-sector ATPase FliI [Rhodospirillum centenum SW]
          Length = 447

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 168/441 (38%), Positives = 257/441 (58%), Gaps = 7/441 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           MQ + + +  +AE  +       G +SS+  +   V  + + + +G       +    + 
Sbjct: 1   MQPDTDQV--IAEIDALPDHSIYGRVSSVLGMLVEVGGVEKRLSVGGRCRVITRGGRVVP 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+        + P G  ++I LG       G+  I+P+  W GRV+NALG+PIDG   
Sbjct: 59  CEVVGFRAGKALLMPFGTLDDIGLGCRAEVAEGQPAITPTTGWLGRVVNALGEPIDGKGP 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L +G     I +  PPA  R+RV      G+R I+ F   C GQR+G+FAGSG+GKS L+
Sbjct: 119 LPQGPRPTPIRASPPPAHARRRVGGKIDLGVRAINTFLTCCKGQRMGIFAGSGVGKSVLM 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           SM A+       +I L+GERGREV+EF+E D   + L +SVVVVATSDE P++R+ A   
Sbjct: 179 SMLAKYTAAQVSVIGLIGERGREVQEFLEADLGPEGLARSVVVVATSDEPPLMRRQAAYM 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            + +AE+F  +G +VL ++DS+TRFA + REI  ++GE P  +GYP +VF+ELPRLLER 
Sbjct: 239 TMAVAEFFRDEGQDVLCLMDSVTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP    +G I+ + +VLV+G +  +PIAD+VR ILDGHIV+ R + E GRYP ++ L SV
Sbjct: 299 GPGTG-EGTISGLFTVLVEGGDMEEPIADAVRGILDGHIVMERRIGERGRYPAINILRSV 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      + ++  LV+    L+  + +  ++  +G YR G D ++D+A+H  P + +FL
Sbjct: 358 SRTMPGCNTEEQNLLVTRARRLMAAYADMEEMIRLGAYRRGSDSMVDEAIHFQPALENFL 417

Query: 418 KQSPSDLSSEDV-FQEITKKL 437
           +Q   + S     + E+   L
Sbjct: 418 RQGKDERSDLGTGYSELAAIL 438


>gi|261252325|ref|ZP_05944898.1| flagellum-specific ATP synthase FliI [Vibrio orientalis CIP 102891]
 gi|260935716|gb|EEX91705.1| flagellum-specific ATP synthase FliI [Vibrio orientalis CIP 102891]
          Length = 440

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 150/439 (34%), Positives = 238/439 (54%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + L+Q          V  G +  +  +    T       +G     +  + +   
Sbjct: 1   MLALADRLSQYKSQGLTCRPVASGKLVRVVGLTLEATG--CRAPIGSLCKVETMHGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +++ P      I  G  V    G   +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGESLFLMPSEQITGILPGAKVTPMTGDVGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEKRASFNAEPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               ++G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R +A+ G YP +D   SVS
Sbjct: 298 NGSPDQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDGAFTIKPKLDAYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q+  +    D+   +  +L
Sbjct: 418 QTMKETVPYDMCVNMLSRL 436


>gi|239817832|ref|YP_002946742.1| F0F1 ATP synthase subunit alpha [Variovorax paradoxus S110]
 gi|259585440|sp|C5CNB3|ATPA_VARPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|239804409|gb|ACS21476.1| ATP synthase F1, alpha subunit [Variovorax paradoxus S110]
          Length = 517

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 187/445 (42%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--G 53
           MQ N   +++L +   + L     +   G + S+T     V  LS     G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLGVSANIRNEGTVVSVTDGIVRVHGLSD-AMQGEMLEFPPTA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
             + + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGTPSFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARKSVDQPMQTGLKSIDSMVPIGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIINQKGQNMTCVYVAIGQKASSIKNVVRALEQAGAMDYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P ++   SVSR+   A +   K L   +   + ++ E         + 
Sbjct: 359 FLETNLFNAGIRPAINAGISVSRVGSSAQTKVIKGLSGGIRTDLAQYREL---AAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQAQ 440


>gi|254453435|ref|ZP_05066872.1| ATP synthase F1, alpha subunit [Octadecabacter antarcticus 238]
 gi|198267841|gb|EDY92111.1| ATP synthase F1, alpha subunit [Octadecabacter antarcticus 238]
          Length = 512

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 176/447 (39%), Gaps = 29/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  KN      V + G + S+      V  L   +  G+ V   G  
Sbjct: 1   MAIQAAEISAILKDQIKNFGQEAEVAEVGRVLSVGDGIARVYGL-DNIQAGEMVEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V     G  + I  GD+V        +       GRV++ LG PID
Sbjct: 59  --IQGMALNLENDNVGCVIFGSDQAIKEGDIVKRTNAIVDVPVGDELLGRVVDGLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K        +K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTTKRAVADAKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           + +      +                  +   +G++   V + ++          S+VV 
Sbjct: 176 TAIALDTILNQKSYNAAAGDDEGKKLYCVYVAIGQKRSTVAQLVKKLEDAGAMEYSIVVA 235

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   L+ +AP  A  +AE+F   G + L+I D +++ A + R+++      P    
Sbjct: 236 ATASDPAPLQFLAPYAATAMAEHFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 295

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER     ++ G+   TA+  +   G + +  I  +V SI DG I L 
Sbjct: 296 YPGDVFYLHSRLLERSSKLNEDNGSGSLTALPVIETQGGDVSAFIPTNVISITDGQIFLE 355

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +     +   +   + ++ E   +     +   +
Sbjct: 356 TELFYQGVRPAVNTGLSVSRVGGSAQTKAMSSVAGPVKLSLAQYRE---MAAFAQFGSDL 412

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      + +   + + +KQ      +
Sbjct: 413 DSATQALLARGARLTELMKQKQYSPLT 439


>gi|255931331|ref|XP_002557222.1| Pc12g03370 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581841|emb|CAP79964.1| Pc12g03370 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 554

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 104/433 (24%), Positives = 179/433 (41%), Gaps = 25/433 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q     S+   + + G + S+      V  +S  V   + V      S   G  + 
Sbjct: 52  SILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMS-NVQAEELVEFA---SGVKGMCMN 107

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +   G    +  G+ V   G    +       GRV++ALG PIDG   L    
Sbjct: 108 LEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLN-TK 166

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
                  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK      T+L
Sbjct: 167 QKARAQLKAPGILPRQSVNQPVQTGMKCVDSMVPIGRGQRELIIGDRQTGKTAVALDTML 226

Query: 179 SMFARSDCFD-------KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           +    ++            I   VG++   V + ++     D +K SV++ AT+ E+  L
Sbjct: 227 NQKRWNNNKAATEDEKLYCIYVAVGQKRSTVAQLVKTLEEQDAMKYSVIIAATASEAAPL 286

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP T   + E+F   G + ++I D +++ A + R+++      P    YP  VF   
Sbjct: 287 QYIAPFTGCAMGEWFRDNGRHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 346

Query: 291 PRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER     K  G  ++TA+  +   G + +  I  +V SI DG I L   L  +G  
Sbjct: 347 SRLLERAAKMNKTHGAGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIR 406

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + + 
Sbjct: 407 PAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLA 463

Query: 409 QVPIIYDFLKQSP 421
           +   + + LKQ  
Sbjct: 464 RGERLTELLKQKQ 476


>gi|153834126|ref|ZP_01986793.1| flagellar protein export ATPase FliI [Vibrio harveyi HY01]
 gi|156975428|ref|YP_001446335.1| flagellum-specific ATP synthase [Vibrio harveyi ATCC BAA-1116]
 gi|269961622|ref|ZP_06175984.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3]
 gi|148869496|gb|EDL68494.1| flagellar protein export ATPase FliI [Vibrio harveyi HY01]
 gi|156527022|gb|ABU72108.1| hypothetical protein VIBHAR_03159 [Vibrio harveyi ATCC BAA-1116]
 gi|269833663|gb|EEZ87760.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3]
          Length = 439

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 150/439 (34%), Positives = 237/439 (53%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ   + L     +      V  G +  +  +    T       +G   + +  +     
Sbjct: 1   MQALADRLKNYKVEGLTTRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMSGHMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGAKVTPLTSEAGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDHRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               ++G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGDDQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDGAFTLKPKLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   +    D+   + K +
Sbjct: 418 QRMKESVPYDMCVNMLKSI 436


>gi|225028201|ref|ZP_03717393.1| hypothetical protein EUBHAL_02473 [Eubacterium hallii DSM 3353]
 gi|224954513|gb|EEG35722.1| hypothetical protein EUBHAL_02473 [Eubacterium hallii DSM 3353]
          Length = 501

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  ++Y+  L     G +  +      +  L +    G+ +   G   +  G V+ 
Sbjct: 11  SVIKEQIKNYTAKLETTDVGTVIQVADGIARIHGL-ENAMQGELLEFPG---EVYGMVMN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    ++ GD+V   GR   +       GRV+NALG+PID    +   D
Sbjct: 67  LEEDNVGVVLLGDSRAVNEGDVVKTTGRVVEVPVGDALTGRVVNALGQPIDEKGPID-TD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +       ++RQ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 KYRPVERVAYGVIDRQAVDTPVQTGIKAIDSMVPIGRGQRELIIGDRQTGKTAIAVDTII 185

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   ++     D ++ + VV +T+ E   L+ +AP     
Sbjct: 186 NQKGQNMHCIYVAIGQKASTVAGIVKTLKEHDAMEYTTVVASTASELAPLQYIAPYAGCA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E +  +G++VL+I D +++ A S R ++      P    YP  VF    RLLER    
Sbjct: 246 IGEEWMERGEDVLIIYDDLSKHATSYRTLSLLLRRPPGREAYPGDVFYLHSRLLERASRL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +     + +  I  +V SI DG I L   +   G  P ++   SVS
Sbjct: 306 SKELGGGSLTAIPIIETQAGDVSAYIPTNVISITDGQIYLETEMFHAGFRPAINAGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   +   + ++ E   +     +   +D    + + Q   I + LK
Sbjct: 366 RVGGAAQIKAMKKIAGPIRTELAQYRE---LASFAQFGSELDDDTRERLAQGERIKEVLK 422

Query: 419 QSPSDL 424
           Q     
Sbjct: 423 QPQYQP 428


>gi|328957986|ref|YP_004375372.1| F0F1 ATP synthase subunit alpha [Carnobacterium sp. 17-4]
 gi|328674310|gb|AEB30356.1| F0F1 ATP synthase subunit alpha [Carnobacterium sp. 17-4]
          Length = 515

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 172/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +    Y   LV+ + G +S +         L +    G+ +          G    
Sbjct: 10  SLIKKQIASYQSELVIDEVGTVSYVGDGIARAYGL-ENAMSGELLEFADG---TFGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           + ++ V I  +G    I  GD+V   GR   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEVNDVGIIILGEFTGIREGDIVKRTGRIMQVPVGEAMIGRVVNPLGQPIDGLGEIVTTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I S+ P  M+R+ V +  +TGI+ ID   P+  GQR  V      GK+TL      
Sbjct: 126 -TRPIESEAPGVMDRRSVNEPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTTLAIDTIL 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++V+ A++ +   L  +AP     
Sbjct: 185 NQKGQDTICIYVAIGQKESTVRNQVETLKKYGAMDYTIVMTASASQPAPLLYIAPYAGSA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E F   G +VL+I D +T+ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 IGEEFMYNGKHVLIIFDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L   L   G  P +    SVS
Sbjct: 305 SDKLGGGSMTAIPFVETQAGDISAYIPTNVISITDGQIFLESDLFYSGIRPAIAAGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E         +   +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVSGTLRLDLASFRELE---AFTQFGSDLDAATQAKLNRGHRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QGLH 425


>gi|89895732|ref|YP_519219.1| hypothetical protein DSY2986 [Desulfitobacterium hafniense Y51]
 gi|89335180|dbj|BAE84775.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 433

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 163/421 (38%), Positives = 244/421 (57%), Gaps = 9/421 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDI 69
           L +    +L+V  G ++ I  +   +      V +G++  +H  +  +   +V+      
Sbjct: 8   LHKISDLDLIVSHGRVAKIVGLM--IESDGPRVSVGEYCRIHTQQGKEIPAEVVGFRNST 65

Query: 70  VYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P+   E I+ GD V     +  +       GR+++ LG+P+DG   +   D    +
Sbjct: 66  TLLMPLAELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPMVTHRD--YPL 123

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P A  R R+      G+R +D    +  GQRIG+FAGSG+GKSTLL M AR+    
Sbjct: 124 QNAPPSAFLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAG 183

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+LVGERGRE+R+FI +D   + L++SV+VVATSD+  ++R  A  TA  IAEYF  
Sbjct: 184 VNVIALVGERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRD 243

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL++DS+TRFA + RE+   +GE P  RGYP SVF+ LP+LLER G SE   G+I
Sbjct: 244 QGQDVLLMMDSVTRFAMAQREVGLTTGEPPATRGYPPSVFAMLPKLLERSGMSE--IGSI 301

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLVDGD+HN+PIAD+VR ILDGHIVL R LA +  YP +D L SVSR+ +   + 
Sbjct: 302 TGIYTVLVDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAP 361

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           + K+L   L   +  + + +D+  IG Y  G +  +D A+  +  I  FL+Q   +  S 
Sbjct: 362 EHKELAGKLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQDVEEKVSF 421

Query: 428 D 428
           D
Sbjct: 422 D 422


>gi|261197848|ref|XP_002625326.1| ATP synthase F1 alpha subunit [Ajellomyces dermatitidis SLH14081]
 gi|239595289|gb|EEQ77870.1| ATP synthase F1 alpha subunit [Ajellomyces dermatitidis SLH14081]
 gi|239607716|gb|EEQ84703.1| ATP synthase F1 alpha subunit [Ajellomyces dermatitidis ER-3]
          Length = 483

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 173/406 (42%), Gaps = 22/406 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
           +     V  ++  V   + V      S   G  + +    V +   G    +  G+ V  
Sbjct: 9   SDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKR 64

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G+   +       GRVI+ALG PIDG   +   +       K P  + R+ V +  +TG
Sbjct: 65  TGQIVDVPVGDALLGRVIDALGNPIDGKGPIKTTE-RRRAQVKAPGILPRRSVNQPVQTG 123

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGER 198
           ++ +D   P+  GQR  +      GK       +L+    +D  D       +   VG++
Sbjct: 124 LKCVDSMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNDSNDETKKLYCVYVAVGQK 183

Query: 199 GREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++    ++  K S+VV AT+ E+  L+ +AP TA   AE+F   G + L+  D
Sbjct: 184 RSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTATACAEFFRDSGRHALITYD 243

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVLV 315
            +++ A + R+++      P    YP  VF    RLLER        + G++TA+  +  
Sbjct: 244 DLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDAHKGGSLTALPIIET 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
            G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A     K++  S
Sbjct: 304 QGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGS 363

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 364 LKLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQ 406


>gi|332994118|gb|AEF04173.1| flagellum-specific ATP synthase [Alteromonas sp. SN2]
          Length = 444

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 153/435 (35%), Positives = 235/435 (54%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
                 L +  S   +V  G +  +  +  T+  +   + +G   + Q    +   +V+ 
Sbjct: 6   HAHFDSLQKQVSSPPIVAAGKL--VRGIGLTLEAVGCQLPVGSQCLVQTIEGEIEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
              DI Y+ P      I  G  V    R   ++      GRV++  G P+DG   + K +
Sbjct: 64  FGADITYLMPTEAVRGIVPGSRVMPLNRQSGLAVGMGLLGRVVDGNGNPLDGLGEI-KTE 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             +         + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 123 TRVPTTRPPINPLIRRAITQPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTR 182

Query: 184 SDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D V++ LVGERGREV+EFI D    +   ++VVV A +D SP++R     TAVTIA
Sbjct: 183 GCEADVVVVGLVGERGREVKEFIHDILTEEERARAVVVAAPADTSPLMRLKGCETAVTIA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G  VLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G   +
Sbjct: 243 EYFRDQGLKVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSE 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LA+ G YP +D  AS+SR+  
Sbjct: 303 KQGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMP 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S + +++   +  +   +++ +D+  IG Y  G D  +D A+   P I  FL+Q   
Sbjct: 363 MVVSDEHQQMARRVRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINAFLQQGMK 422

Query: 423 DLSSEDVFQEITKKL 437
           ++   D   E    L
Sbjct: 423 NVLPYDECLEGMAAL 437


>gi|34539159|gb|AAQ74463.1| F1-ATPase alpha subunit [Acorus gramineus]
          Length = 413

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 94/410 (22%), Positives = 171/410 (41%), Gaps = 22/410 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V          G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVDGLNE-IQAGEMVEFSNG---VQGIALNLENENVGIVIFGSDTAIKEGDLVKRT 56

Query: 91  GRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPVGKAMLGRVVDALGVPIDGKGALSDYE-RKRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERG 199
           + +D   P+  GQR  +      GK+ +          L+           +   +G++ 
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGNEQEKLYCVYVAIGQKR 175

Query: 200 REVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++       L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSANQALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERASKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              + ++ E   +     +   +D      +++   + + LKQ   +  +
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTEVLKQPQYEPLT 402


>gi|281412616|ref|YP_003346695.1| ATP synthase F1, alpha subunit [Thermotoga naphthophila RKU-10]
 gi|281373719|gb|ADA67281.1| ATP synthase F1, alpha subunit [Thermotoga naphthophila RKU-10]
          Length = 503

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 97/432 (22%), Positives = 176/432 (40%), Gaps = 18/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   + ++ E+  K+   +      G +  +      V  L++ V + + V      
Sbjct: 1   MRINPGEITKVLEEKIKSFEEKIDLEDTGKVIQVGDGIARVYGLNK-VMVSELVEFVETG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G    +  D V I  +G   +I  G  V    R   +       GRV+N LG+P+D
Sbjct: 60  --VKGVAFNLEEDNVGIIILGDYRDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  K P  + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GKGPINAKNFR-PIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   I+          + VVVA++ +   L+
Sbjct: 177 TAIAIDTIINQKGQGVYCIYVAIGQKKSAIARIIDKLRQYGAMEYTTVVVASASDPASLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF+  G + L++ D +++ A + R+++      P    YP  +F    
Sbjct: 237 YIAPYAGCAMGEYFAYSGRDALVVYDDLSKHAVAYRQLSLLMRRPPGREAYPGDIFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 297 RLLERAVRLNDKLGGGSLTALPIVETQANDISAYIPTNVISITDGQIYLEPGLFYAGQRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E         +   +D      + +
Sbjct: 357 AINVGLSVSRVGGSAQIKAMKQVAGMLRIDLAQYRELE---TFAQFATELDPATRAQIIR 413

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 414 GQRLMELLKQEQ 425


>gi|253990097|ref|YP_003041453.1| flagellum-specific ATP synthase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781547|emb|CAQ84710.1| flagellum-specific ATP synthase [Photorhabdus asymbiotica]
          Length = 455

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 163/447 (36%), Positives = 242/447 (54%), Gaps = 20/447 (4%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----G 60
           L+   +  E  S   V + G ++  T +    T L  ++ LG   + + +N  N+     
Sbjct: 12  LDAFEKKLEKTSP--VRRYGRLTRATGLVMEATGL--HLPLGATCLIERQNGGNIEEVES 67

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGK 111
           +V+  N D + + P+   E I  G  V+           GR ++       GRV++  G+
Sbjct: 68  EVVGFNGDKLLLMPLEDLEGIVPGARVYSRPYSGEDCSSGR-QLPLGPELLGRVLDGAGR 126

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG  S   G     + +     + R  + +    G+R I+    +  GQR+G+FAGSG
Sbjct: 127 PLDGFPSPDTG-YRAPLTTPPINPLQRTPISEVLDVGVRAINALLTVGRGQRMGLFAGSG 185

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230
           +GKS LL M AR    D +++ L+GERGREV++FIE+ LG   L +SVVV A +D SP+L
Sbjct: 186 VGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGATGLARSVVVAAPADISPLL 245

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++L
Sbjct: 246 RMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAKL 305

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP 
Sbjct: 306 PALVERAGNGVNGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPA 365

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR      +    + V     L+  ++  RD+  +G Y  G D +LDKA+   
Sbjct: 366 IDIEASISRAMTSLINKQHYRQVQQFKQLLASYQRNRDLINVGAYAAGSDPLLDKAIELY 425

Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437
           P +  FL+Q   + S         ++L
Sbjct: 426 PYMAQFLQQDIEERSEYAAACTQLQQL 452


>gi|15642129|ref|NP_231761.1| flagellum-specific ATP synthase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121586784|ref|ZP_01676566.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 2740-80]
 gi|121727214|ref|ZP_01680381.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V52]
 gi|153213229|ref|ZP_01948641.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 1587]
 gi|153818975|ref|ZP_01971642.1| flagellum-specific ATP synthase FliI [Vibrio cholerae NCTC 8457]
 gi|153822887|ref|ZP_01975554.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|153828592|ref|ZP_01981259.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 623-39]
 gi|227082255|ref|YP_002810806.1| flagellum-specific ATP synthase FliI [Vibrio cholerae M66-2]
 gi|229507785|ref|ZP_04397290.1| flagellum-specific ATP synthase FliI [Vibrio cholerae BX 330286]
 gi|229511978|ref|ZP_04401457.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|229519114|ref|ZP_04408557.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC9]
 gi|229607330|ref|YP_002877978.1| flagellum-specific ATP synthase [Vibrio cholerae MJ-1236]
 gi|254226362|ref|ZP_04919951.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V51]
 gi|254291367|ref|ZP_04962160.1| flagellum-specific ATP synthase FliI [Vibrio cholerae AM-19226]
 gi|254849216|ref|ZP_05238566.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MO10]
 gi|255745131|ref|ZP_05419080.1| flagellum-specific ATP synthase FliI [Vibrio cholera CIRS 101]
 gi|262153479|ref|ZP_06028609.1| flagellum-specific ATP synthase FliI [Vibrio cholerae INDRE 91/1]
 gi|262191380|ref|ZP_06049570.1| flagellum-specific ATP synthase FliI [Vibrio cholerae CT 5369-93]
 gi|298497848|ref|ZP_07007655.1| flagellar protein export ATPase FliI [Vibrio cholerae MAK 757]
 gi|9656681|gb|AAF95275.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121548951|gb|EAX58990.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 2740-80]
 gi|121630459|gb|EAX62852.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V52]
 gi|124116029|gb|EAY34849.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 1587]
 gi|125621112|gb|EAZ49457.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V51]
 gi|126510470|gb|EAZ73064.1| flagellum-specific ATP synthase FliI [Vibrio cholerae NCTC 8457]
 gi|126519583|gb|EAZ76806.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|148875863|gb|EDL73998.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 623-39]
 gi|150422697|gb|EDN14651.1| flagellum-specific ATP synthase FliI [Vibrio cholerae AM-19226]
 gi|227010143|gb|ACP06355.1| flagellum-specific ATP synthase FliI [Vibrio cholerae M66-2]
 gi|229343803|gb|EEO08778.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC9]
 gi|229351943|gb|EEO16884.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33]
 gi|229355290|gb|EEO20211.1| flagellum-specific ATP synthase FliI [Vibrio cholerae BX 330286]
 gi|229369985|gb|ACQ60408.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MJ-1236]
 gi|254844921|gb|EET23335.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MO10]
 gi|255736961|gb|EET92357.1| flagellum-specific ATP synthase FliI [Vibrio cholera CIRS 101]
 gi|262030716|gb|EEY49350.1| flagellum-specific ATP synthase FliI [Vibrio cholerae INDRE 91/1]
 gi|262032755|gb|EEY51303.1| flagellum-specific ATP synthase FliI [Vibrio cholerae CT 5369-93]
 gi|297542181|gb|EFH78231.1| flagellar protein export ATPase FliI [Vibrio cholerae MAK 757]
          Length = 439

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 149/437 (34%), Positives = 236/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|149918545|ref|ZP_01907034.1| F0F1 ATP synthase subunit alpha [Plesiocystis pacifica SIR-1]
 gi|149820621|gb|EDM80033.1| F0F1 ATP synthase subunit alpha [Plesiocystis pacifica SIR-1]
          Length = 510

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 179/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + ++++  +      +   V + G + ++      V  LS+    G+ +      
Sbjct: 1   MEIRADEISRIIREQIQGHDTSTSVEETGTVLTVGDGIARVYGLSK-AMAGEMLDFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G V+ +    V +  +G    I  GD+V        +       GRVINALG+ ID
Sbjct: 57  HGVRGMVLNLEEGNVGVALLGNDHLIKEGDIVKRSATIMSVPVGDAMLGRVINALGEAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+   +    +  K P  + R+ V +   TG++ ID   P+  GQR  +      GK
Sbjct: 117 GQGSIESSE-RRPVEVKAPGIIARKSVHEPMLTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   V   +E    +     ++VV A + ES  L+
Sbjct: 176 TAIAVDAIINQKGQNMVCVYVAIGQKQSTVASVVERLRREGAMDYTIVVCAGASESAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTI EYF  KG + LLI D +++ A + R+++      P    YP  VF    
Sbjct: 236 FLAPYTGVTIGEYFRDKGGHALLIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +   G + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERACKLSDKEGGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLESDLFNRGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     ++    L   + ++ E         +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQIKMMRRHAGPLRITLAQYRELE---AFAQFASDLDATTRAQLDR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GQRLVELLKQPQ 424


>gi|6561609|gb|AAF16953.1|AF197621_1 ATPase alpha subunit [Acorus calamus]
          Length = 413

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 171/411 (41%), Gaps = 22/411 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V          G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVDGLNE-IQAGEMVEFANG---VQGIALNLENENVGIVIFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDYE-RKRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGER 198
           ++ +D   P+  GQR  +      GK+ +          L+           +   +G++
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGNEKEKLYCVYVAIGQK 175

Query: 199 GREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++       L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSANQALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L   + ++ E   +     +   +D      +++   + + LKQ   +  +
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTEVLKQPQYEPLT 403


>gi|62180006|ref|YP_216423.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127639|gb|AAX65342.1| Secretion system apparatus SsaN [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322714473|gb|EFZ06044.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 433

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTAGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPEVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|237751985|ref|ZP_04582465.1| ATP synthase subunit alpha [Helicobacter winghamensis ATCC BAA-430]
 gi|229376552|gb|EEO26643.1| ATP synthase subunit alpha [Helicobacter winghamensis ATCC BAA-430]
          Length = 504

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 100/431 (23%), Positives = 181/431 (41%), Gaps = 19/431 (4%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +   + ++ + ++   N      + Q G + +       V  L   +   + V     + 
Sbjct: 4   KLQADEISSIIKERIDNFELDLDIAQTGKVVAYADGVAKVYGLKNAMSY-EMVEFDTGDK 62

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G    +    V +  +G G+EI  G  V   G+  R+       GRV+NALG+PIDG
Sbjct: 63  ---GLASSLEEGSVGVVVLGAGKEIKEGTSVKRLGKLLRVPVGDGMMGRVVNALGEPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +    +  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+
Sbjct: 120 KGAVEVKEYRF-MEEKAPGIMARKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           T+      +        I   +G++   V + +           +++V A + +S  ++ 
Sbjct: 179 TVAIDTIINQKGQDVVCIYVAIGQKESTVAQVVRKLEEHGAMEYTIIVNAPASDSAAMQY 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP   VT+ EYF   G + L++ D +++ A + RE++      P    +P  VF    R
Sbjct: 239 LAPYAGVTMGEYFRDNGRHALIVYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSR 298

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +     +    I  +V SI DG I L   L   G  P 
Sbjct: 299 LLERAAKVSDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGIRPA 358

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  +L   + ++ E +       +   +D    K + + 
Sbjct: 359 INVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLDRG 415

Query: 411 PIIYDFLKQSP 421
             + + LKQ P
Sbjct: 416 QRMVEVLKQPP 426


>gi|164685614|gb|ABY66753.1| atp1 [Ipomoea coccinea x Ipomoea quamoclit]
          Length = 413

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|37527629|ref|NP_930973.1| type III secretion system ATPase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787064|emb|CAE16139.1| Type III secretion component protein SctN [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 440

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 160/444 (36%), Positives = 239/444 (53%), Gaps = 14/444 (3%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-- 56
           M+ +L+ +            L+   G ++ +T        +   V +G+    +  ++  
Sbjct: 1   MKLSLDHIPGKMRHAINECRLIQIRGRVTQVTGTLLK--AVIPGVRIGELCHLRNPDNTL 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
             L +VI        + P+G    IS    V   G   ++       G+V++ LG P  G
Sbjct: 59  SLLAEVIGFQQHQALLTPLGEMFGISSNTEVSPTGAMHQVGVGDYLLGQVLDGLGNPFSG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L +      +    P  M+R+R+E     G+R ID       GQR+G+FA +G GKS
Sbjct: 119 -GQLPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           TLLS   RS   D  +++L+GERGREVREFIE D   + LK+SV+VVATSD   + R  A
Sbjct: 178 TLLSTLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLKRSVLVVATSDRPAMERAKA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+
Sbjct: 238 GFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLM 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L
Sbjct: 298 ERAGQSDK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVL 355

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+ ++  + + +     L   + ++EE   +  IG Y+ G D + D A+  +  I 
Sbjct: 356 RSASRVMNQIITPEHQAQAGLLRKWLAKYEEVELLLQIGEYQKGQDPVADNAIAHIEAIR 415

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
           ++L+Q   + S      +   +LQ
Sbjct: 416 NWLRQGTHEPSD---LPQTLAQLQ 436


>gi|269302494|gb|ACZ32594.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila pneumoniae LPCoLN]
          Length = 442

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 163/444 (36%), Positives = 250/444 (56%), Gaps = 15/444 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           +  + +TL     D   NL    G I+ +  +   +  +   V +G+  + +       +
Sbjct: 4   LTTDFDTLMSQLGDV--NLTTVVGRITEVVGML--IKAVVPNVRVGEVCLVKRNGMEPLV 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--GD 116
            +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID    
Sbjct: 60  TEVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   D +  I    P  ++R ++ +   TG+R ID    +  GQRIG+FAG+G+GKS+
Sbjct: 120 GPLQNVDQTFPIFRAPPDPLHRAKLRQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179

Query: 177 LLSMFARSDC-FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           LL M AR+    D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLL 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D L
Sbjct: 300 ERSGASDK--GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVL 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  + 
Sbjct: 358 ASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FLKQ   + ++   ++E  ++L+
Sbjct: 418 RFLKQDIHEKTN---YEEAAQQLR 438


>gi|315497639|ref|YP_004086443.1| atpase, flii/yscn family [Asticcacaulis excentricus CB 48]
 gi|315415651|gb|ADU12292.1| ATPase, FliI/YscN family [Asticcacaulis excentricus CB 48]
          Length = 462

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 165/423 (39%), Positives = 252/423 (59%), Gaps = 9/423 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++ +  +         ++ +G       ++   L  +V+    D   + P G  E ++
Sbjct: 37  GRVAVVNGLLIEAKGGMSFMEVGSRCEIMRRHDTPLPVEVVGFREDRALMMPFGPVEGVA 96

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  +       ++ PS  W GR+I+A G PIDG   L KG +   + +  PPA +R RV
Sbjct: 97  PGAEIRISNEGAKVYPSTAWLGRIIDAFGDPIDGLGPLPKGGIGYPLKAAPPPAHSRARV 156

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    G+R +++FT  C GQR+GVFAGSG+GKS LLSM AR    D V++ L+GERGRE
Sbjct: 157 GERLDLGVRAMNVFTTCCRGQRLGVFAGSGVGKSVLLSMLAREAACDAVVVGLIGERGRE 216

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E+ LG+  + +++VVVATSDE  + R+ A    + ++E+   +G  VL ++DS+T
Sbjct: 217 VREFVEETLGEAGISRAIVVVATSDEPALKRRQAAYMTLALSEFLRDQGLEVLCLMDSVT 276

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLV 315
           RFA + REI   +GE P  +GY  + F+ELP+LLER GP        + G IT + +VLV
Sbjct: 277 RFAMAQREIGLATGEPPTTKGYTPTCFAELPKLLERAGPGPLLPDGTQTGPITGLFTVLV 336

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+HN+PIAD+VR ILDGHIV++RS+AE GR+P +D L S+SR      +  E+++V +
Sbjct: 337 DGDDHNEPIADAVRGILDGHIVMSRSIAERGRFPAIDVLKSISRTMPGCQTLAEREVVRN 396

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434
              ++  +    ++  IG YR G D ++D+A+   P I  FL QSP + +S +D F  + 
Sbjct: 397 ARAVMSAYTNMEELIRIGAYRTGADPLVDRAIQLNPSIEQFLSQSPDEATSLDDSFTLLG 456

Query: 435 KKL 437
           + L
Sbjct: 457 QIL 459


>gi|145524553|ref|XP_001448104.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415637|emb|CAK80707.1| unnamed protein product [Paramecium tetraurelia]
          Length = 526

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 109/435 (25%), Positives = 183/435 (42%), Gaps = 38/435 (8%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  ++ ++QL      N + + G + SI      V  L+Q V  G+ V     +S   G
Sbjct: 34  LEDKIKNISQL------NDIKEYGTVISIGDGIARVFGLTQ-VQAGEMVEF---SSGVRG 83

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V I  +G   EI  GD+V   G     P      GRV +ALG PIDG   +
Sbjct: 84  MALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGPV 143

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            K +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 144 -KTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAI 202

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228
            T+++     D  DK      I   +G++   V   ++        K ++VV AT+ E+ 
Sbjct: 203 DTIINQKPNFDSGDKNKQLYCIYVAIGQKRSTVANLVKILTQAGAMKYTIVVAATASEAA 262

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP  +V + E  S   + +LL+  +I            N    P    YP  VF 
Sbjct: 263 PLQYLAPQFSVVLLENISETMECMLLLFMTIF----------LNKPRPPGREAYPGDVFY 312

Query: 289 ELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +E   G++TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 313 LHSRLLERAAKLNAENGNGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFKG 372

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K +   L   + ++ E   +     +   +D    + 
Sbjct: 373 IRPAINVGLSVSRVGSAAQIKAMKTVAGRLKLELAQYRE---VAAFAQFGSDLDAATQQL 429

Query: 407 VHQVPIIYDFLKQSP 421
           +++   + + LKQ  
Sbjct: 430 LNRGAQLTELLKQKQ 444


>gi|153803032|ref|ZP_01957618.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-3]
 gi|153825622|ref|ZP_01978289.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-2]
 gi|124121430|gb|EAY40173.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-3]
 gi|149740773|gb|EDM54872.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-2]
 gi|327484659|gb|AEA79066.1| Flagellum-specific ATP synthase FliI [Vibrio cholerae LMA3894-4]
          Length = 439

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 149/437 (34%), Positives = 236/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAMPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|55824778|gb|AAV66471.1| F1-ATPase alpha subunit [Ilex verticillata]
          Length = 424

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              VG++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|326315258|ref|YP_004232930.1| ATP synthase F1 subunit alpha [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372094|gb|ADX44363.1| ATP synthase F1, alpha subunit [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 519

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 107/445 (24%), Positives = 191/445 (42%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVTDGIVRVHGLSD-VMQGEMLEFPATQ 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPSYGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELVGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    L+  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKLTDVIEKVAPGVIARQSVDQPLQTGIKSIDAMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +   ++ A+       I   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIIAQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMEYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKIIKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQAQ 440


>gi|332969725|gb|EGK08739.1| ATP synthase F1 sector alpha subunit [Kingella kingae ATCC 23330]
          Length = 515

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 109/445 (24%), Positives = 189/445 (42%), Gaps = 30/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   ++ L +   +NL         G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQISPTEISDLLKAKIENLNTKQEARTRGTVISVTDGIVRVYGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDEVKCTGRILEVPIGRELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAAK-TAPIEKIAPGVIARQSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVVCIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF   G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYAGCTMGEYFRDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINADEVEKLTAGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSD 423
           +D    K +    ++ + +KQ   +
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQFN 437


>gi|183220213|ref|YP_001838209.1| F0F1 ATP synthase subunit alpha [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910331|ref|YP_001961886.1| F0F1 ATP synthase subunit alpha [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|226739903|sp|B0SDA3|ATPA_LEPBA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739904|sp|B0SLC6|ATPA_LEPBP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167775007|gb|ABZ93308.1| Alpha subunit of the H(+)-transporting two- sector ATPase, F1
           sector [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778635|gb|ABZ96933.1| ATP synthase F1, alpha subunit [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 504

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 105/431 (24%), Positives = 181/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  +++ K+L V + G +  +      V  L+  V  G+ V  Q       GQ   
Sbjct: 10  SVLKQEIKNFKKDLQVEEVGTVLEVGDGIARVYGLT-NVMSGELVEFQNG---VRGQAFN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +   G   +I  G  V   G+   +       GRV+N LG+ IDG   L    
Sbjct: 66  LEENSVGVVIFGDYIKIEEGFSVKRVGKIFEVPVGPELLGRVLNPLGEVIDGKGPLN-AK 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  + S  P    R+ V +  +TGI+ ID   P+  GQR  +    G GK+++      
Sbjct: 125 KTRPVESPAPGIAMRKSVHEPMQTGIKAIDAMIPIGRGQRELIIGDRGTGKTSIAIDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V   IE        + +++V A + E   +  +AP +  T
Sbjct: 185 NQKGKGVICVYVAIGQKASTVASTIEMLREKGALEYTIIVSANASEPAPMLYIAPYSGAT 244

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF  +     L++ D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 MAEYFMYEEGKATLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            + +   G++TA+  +       +  I  +V SI DG I L  +L   G  P VD   SV
Sbjct: 305 LDDKFGGGSMTALPIIETQEGEVSAYIPTNVISITDGQIYLQSNLFASGLRPAVDVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  +L   + +F   RD+         +D +    + +   + + L
Sbjct: 365 SRVGSAAQIKAMKKVAGTLKSDLAQF---RDLEAFAQLGTELDPVTQAQLDRGYRVLEIL 421

Query: 418 KQSPSDLSSED 428
           KQ  +  +  +
Sbjct: 422 KQPNNSPTPVE 432


>gi|226313066|ref|YP_002772960.1| flagellum-specific ATP synthase [Brevibacillus brevis NBRC 100599]
 gi|226096014|dbj|BAH44456.1| flagellum-specific ATP synthase [Brevibacillus brevis NBRC 100599]
          Length = 439

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 159/410 (38%), Positives = 232/410 (56%), Gaps = 10/410 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVGIG 78
              G ++ +     T+      V LG+       N+    + +V+    + V + P+G  
Sbjct: 20  RVNGKVTQVVG--LTIESQGPEVKLGEICHLYPANTKEPIIAEVVGFRENKVLLMPLGEL 77

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
            EI  G  V   GR   +       G +++ LG+P     SL  G  S    +  P  + 
Sbjct: 78  TEIGPGCDVVATGRSLDVKVGPEILGSILDGLGRP--YQGSLPFGLTSYPTNNMPPNPIL 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R+++    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I L+GE
Sbjct: 136 RPRIQEPLSVGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMIARNTTADINVIGLIGE 195

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EFI  D   + LK+SVVVVATSD+  ++R    + A +IAEYF  +G NV+L++
Sbjct: 196 RGREVMEFIERDLGEEGLKRSVVVVATSDQPAMIRIKGAMIATSIAEYFRDRGMNVMLMM 255

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+    GE P  RGY  SVF+ LP+L+ER G ++K  G+ITA  +VLVD
Sbjct: 256 DSVTRFAMAQREVGLAIGEPPATRGYTPSVFAMLPKLMERAGTADK--GSITAFYTVLVD 313

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            D+ NDPIAD+VR ILDGHIVL+R +A +G +P +D +ASVSR+ ++   ++       L
Sbjct: 314 SDDMNDPIADAVRGILDGHIVLDRKIAHKGHFPAIDVMASVSRVMNEIVDSNHLDAARQL 373

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              +  F E  D+  IG Y+PG +  +D A+    II  F  Q   + S+
Sbjct: 374 KKHLATFREAEDLINIGAYKPGSNREIDAAIRYRDIISGFTAQGTHEPST 423


>gi|149188088|ref|ZP_01866383.1| flagellum-specific ATP synthase [Vibrio shilonii AK1]
 gi|148838076|gb|EDL55018.1| flagellum-specific ATP synthase [Vibrio shilonii AK1]
          Length = 440

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 151/439 (34%), Positives = 239/439 (54%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ   E LA    +  K+  +  G +  +     T+  +     +G     +  + +   
Sbjct: 1   MQALAERLANYKVEGHKSRAIASGKLVRVVG--LTLEAIGCKAPIGSVCKVETMHGEMDA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +Y+ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGEHLYLMPSEQITGVLPGARVTPMTSDAGLPVGMELLGRVIDGVGNPLDGLGEI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDKRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG    ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGTSGRERSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGDVNQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +        +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITDDQHVLMSKAVRQVLSVCRKNQDLVSIGAYKPGTDPAIDSAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           QS  +    D+   + K+L
Sbjct: 418 QSMRETVPYDMCLGMLKQL 436


>gi|2493022|sp|Q40611|ATPA_OCHNE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|1430915|emb|CAA67540.1| subunit alpha of ATPase [Ochrosphaera neapolitana]
          Length = 438

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 181/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y + + +   G +  +      V  L Q V  G+ +  + K    +G  + + 
Sbjct: 13  IRQQIESYDQEVQIDNVGTVLQVGDGIARVYGLEQ-VMAGELLEFEDK---TVGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V +  +G G +I  G  V   G+  +I     + GRV+++L +PIDG   +   +  
Sbjct: 69  NDNVGVVLMGPGLDILEGGSVRSTGKIAQIPVGDGFLGRVVDSLARPIDGKGDIDATESR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
           + + S  P  + R+ V +  +TGI  ID   P+  GQR  +      GK+   + ++  +
Sbjct: 129 L-VESMAPGIITRKSVCEPVQTGITAIDSMIPIGRGQRELIIGDRQTGKTSVAIDTIINQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V   +           ++VV + +D+   L+ +AP T   +A
Sbjct: 188 KSEDVICVYVAIGQKASSVASIVTTLEEKGALGYTIVVASNADDPATLQYIAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG   L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYKGKATLIIYDDLSKQASAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   K++   L   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSAAQTKAMKQVAGKLKLELAQFAELE---AFSQFASDLDAATQAELARGQRLREMLKQP 424

Query: 421 PS 422
            +
Sbjct: 425 QN 426


>gi|168263753|ref|ZP_02685726.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|205347555|gb|EDZ34186.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
          Length = 433

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 229/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG           + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRALPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDAYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|150020195|ref|YP_001305549.1| F0F1 ATP synthase subunit alpha [Thermosipho melanesiensis BI429]
 gi|166201684|sp|A6LJR3|ATPA_THEM4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149792716|gb|ABR30164.1| ATP synthase F1, alpha subunit [Thermosipho melanesiensis BI429]
          Length = 507

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 180/432 (41%), Gaps = 18/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   + ++ E   +    +      G +  +         L+  V   + V      
Sbjct: 1   MRINPGEIVKVLESKIEGFKEEINLNDVGKVIQVGDGIARAYGLN-NVMANEMVEFVETG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +  D V I  +G  ++I  G  V    R   +       GRV+N LG+P+D
Sbjct: 60  --TIGMAFNLEEDNVGIIILGDYKDIKEGYTVKRLNRIMQVPVGEALLGRVVNPLGEPLD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +   ++  K P  + R+ V+   +TGI++ID   P+  GQR  +      GK
Sbjct: 118 GLGPIDAKEYR-DVEVKAPGVIYRKPVDTPLQTGIKLIDALIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   ++          + VVVA++ ++  L+
Sbjct: 177 TAIAIDTIINQKGKGVYCIYVAIGQKASAVARLVDKLKQHGAMEYTTVVVASAADNASLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  KG + L+I D +++ A + R+++      P    YP  VF    
Sbjct: 237 YIAPYAGCAMGEYFMYKGKDALVIYDDLSKHAVAYRQLSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER    + +   G++TA+  +    ++ +  I  +V SI DG I L  SL   G+ P
Sbjct: 297 RLLERAARLDDKYGGGSLTALPIIETQANDISAYIPTNVISITDGQIYLEPSLFYAGQRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+  SL   + +++E         +   +D      + +
Sbjct: 357 AVNIGLSVSRVGGAAQVKAMKKVAGSLKLDLAQYQELETFAQ---FATELDPATQAQITR 413

Query: 410 VPIIYDFLKQSP 421
              + + +KQ  
Sbjct: 414 GQRLMELMKQEQ 425


>gi|213583910|ref|ZP_03365736.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 432

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|297582028|ref|ZP_06943947.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC385]
 gi|297533723|gb|EFH72565.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC385]
          Length = 439

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 149/437 (34%), Positives = 236/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLAQYKVEGHSTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAMPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|164685554|gb|ABY66723.1| atp1 [Rhizanthes lowii]
          Length = 413

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-MKAGEMVEFA---SGVKGIALNLENENVGIVFFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  ++   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGAISDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIFNQKQMNSKATSESETLSCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|160871653|ref|ZP_02061785.1| ATP synthase F1, alpha subunit [Rickettsiella grylli]
 gi|159120452|gb|EDP45790.1| ATP synthase F1, alpha subunit [Rickettsiella grylli]
          Length = 514

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 189/439 (43%), Gaps = 26/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E + +  + +  +   +  G I S+      +  L+  V LG+ +     +S   G  + 
Sbjct: 11  EIIKERIQKFDISTETRTEGTIVSLRDGIVRIYGLND-VMLGEMIEF---SSQCYGLALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E +S G  V   GR   +       GRV+NALG PIDG  ++ + +
Sbjct: 67  LERDSVGAVVLGDYEGLSEGQTVKCTGRILEVPVGEALLGRVVNALGHPIDGRGTI-ETE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               I    P  + RQ V +  +TGI  ID   P+  GQR  +      GK+ L   ++ 
Sbjct: 126 KKSPIEQIAPGVIWRQSVSQPLQTGILAIDSMVPIGRGQRELIIGDRQTGKTALAIDAII 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D   K I   +G++   +   +      D LK ++++ A + +S  L+ +AP     
Sbjct: 186 NQKDTGVKCIYVAIGQKASSIAAVVRKLEEQDALKHTIIISANAADSAALQFIAPYAGCA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI--- 297
           + EYF  +G++ L+I D +T+ A + R+I+      P    YP  +F    RLLER    
Sbjct: 246 MGEYFRDQGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLLERAARV 305

Query: 298 ----------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
                     G  + + G++TA+  +     + +  +  +V SI DG I L   L   G 
Sbjct: 306 NEAFVEKATNGRVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNSGI 365

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +D +  K +
Sbjct: 366 RPAINAGLSVSRVGSAAQTKIIKKLGGGVRLSLAQYRE---LAAFSQFMSDLDEVTRKQL 422

Query: 408 HQVPIIYDFLKQSPSDLSS 426
            +   + + LKQ      S
Sbjct: 423 ERGQRVTEILKQKQYSPLS 441


>gi|81428737|ref|YP_395737.1| F0F1 ATP synthase subunit alpha [Lactobacillus sakei subsp. sakei
           23K]
 gi|115312249|sp|Q38WK3|ATPA_LACSS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78610379|emb|CAI55429.1| H(+)-transporting two-sector ATPase (ATP synthase), alpha subunit
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 511

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 106/439 (24%), Positives = 177/439 (40%), Gaps = 15/439 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q   +Y++ L V+  G ++ +         L   +   + +     +    G    
Sbjct: 10  ALIKQQLANYNEELAVEEVGTVTYVGDGIARAHGLENALS-SELLEFSNGS---YGVAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  E I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LETNDVGIIILGEYENIREGDQVKRTGRIMEVPVGDALIGRVVNPLGQPVDGRGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+++      
Sbjct: 125 KTRPIEKKAPGVMARQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTSVAIDTII 184

Query: 184 SDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   VR  +E          ++VV A   +   L  +AP     
Sbjct: 185 NQKGQDMICIYVAIGQKESTVRTQVETLRRYGAMDYTIVVEAGPSQPAPLLYIAPYAGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  +F    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQAAAYREISLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G  P +D  +SVS
Sbjct: 305 SDELGGGSMTALPIIETQAGDISAYIPTNVISITDGQIFLESDLFYSGTRPAIDAGSSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   +  + E         +   +D      +++     + LK
Sbjct: 365 RVGGAAQTKAMKKVSGTLRLDLSSYRELE---AFTQFGSDLDAATQAKLNRGKRTVEVLK 421

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q        +    I   L
Sbjct: 422 QPLHKPLPFEQQTVILYAL 440


>gi|290969221|ref|ZP_06560746.1| ATP synthase F1, alpha subunit [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780727|gb|EFD93330.1| ATP synthase F1, alpha subunit [Megasphaera genomosp. type_1 str.
           28L]
          Length = 511

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 103/436 (23%), Positives = 181/436 (41%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  EDY+  + V   G +  +      V  L + V  G+ +          G  + 
Sbjct: 10  AIIKKQIEDYNVEMNVDDVGTVLEVGDGIAHVYGLDK-VMSGELLELP---HGVKGLALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G   EI  GD V   G+   +       GRV+N LG PIDG   +   +
Sbjct: 66  LEEDNVGAVLLGDDSEIKEGDTVKRTGKVMSVPVGEAMMGRVVNPLGAPIDGKGPIQTKE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + +        +RQ V+   +TG++ ID   P+  GQR  +    G GK+ +   ++ 
Sbjct: 126 TRL-VEVTASGIADRQPVKVPLQTGLKSIDSMVPIGRGQRELIIGDRGTGKTAIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D     +   +G++   V   +     +     ++VV AT+ +   L+ +AP + V+
Sbjct: 185 NQKDSGVICVYVAIGQKASTVARVVRTLEENGAMAYTIVVAATASDGAPLQYLAPYSGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G +VL + D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IAEYFMYQGKDVLCVYDDLSKHAQAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  +  +V SI DG I L       G  P ++   SVS
Sbjct: 305 SDDLGGGSITALPIIETLAGDLSAYVPTNVISITDGQIFLETEAFNAGIRPAINVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   + ++ E   +     +   +D      + +       L 
Sbjct: 365 RVGGSAQIKAMKKVAGTLRLDLAQYRE---LAAFAQFGSDLDKSTKAQIDKGERTMQLLI 421

Query: 419 QSP-SDLSSEDVFQEI 433
           Q     ++ ED   +I
Sbjct: 422 QPQYKPMTVEDQVMQI 437


>gi|153799734|gb|ABS50598.1| ATPase subunit 1 [Arabidopsis thaliana]
 gi|153799736|gb|ABS50599.1| ATPase subunit 1 [Arabidopsis thaliana]
          Length = 463

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 174/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V+         G  + +  + V I   G   
Sbjct: 1   VDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG---VKGMALNLENENVGIVVFGGDT 56

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++A+G PIDG  +L   +    +  K P  + R
Sbjct: 57  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRR-VEVKAPGILER 115

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+T+      +              
Sbjct: 116 KSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILNQKQINSRATSESET 175

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + I+     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 176 MYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 235

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 236 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 295

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A
Sbjct: 296 GSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAA 355

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 QLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 409


>gi|16760496|ref|NP_456113.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141744|ref|NP_805086.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213162226|ref|ZP_03347936.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426019|ref|ZP_03358769.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213854188|ref|ZP_03382720.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25290469|pir||AE0697 H+-transporting two-sector ATPase (EC 3.6.3.14) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16502792|emb|CAD01950.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137372|gb|AAO68935.1| putative type III secretion ATP synthase [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
          Length = 433

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGCELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|296283215|ref|ZP_06861213.1| flagellum-specific ATP synthase [Citromicrobium bathyomarinum
           JL354]
          Length = 442

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 169/438 (38%), Positives = 254/438 (57%), Gaps = 5/438 (1%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           + L + A+    +  +     G ++++      V  L     +G  +  + +      ++
Sbjct: 2   QTLASAARAIRAFPPD--RHFGSVAAVRGALIEVEGLVGSARIGSRIAIECEGGTVDAEI 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGK 121
             ++    +         I+ G  V    G+  + P+  W GRV++ LG+P+D    L  
Sbjct: 60  TGLDRQTAHCLSFNDPHGIATGTRVDLMPGQSMLRPTDQWLGRVVDGLGRPMDDKGPLPV 119

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G  +    +  P A NR RV +  +TG+R +D+F PLC GQR+G+FAGSG+GKSTLLSM 
Sbjct: 120 GPEARLFKADPPAAANRTRVGRRLETGVRSLDLFAPLCRGQRLGLFAGSGVGKSTLLSML 179

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I L+GERGREV+EFIED LG + L +SVVVVATSD   ++R+ A  T + 
Sbjct: 180 ARWVETDIAVIGLIGERGREVQEFIEDDLGPEGLARSVVVVATSDSPALMRRQAAWTTLA 239

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F   G +V+ ++DS+TRFA + REI   +GE P  +GY  +VF+ELPRLLER GP 
Sbjct: 240 IAEHFRDAGRDVMCLMDSVTRFAMAQREIGLANGEPPATKGYTPTVFAELPRLLERAGPG 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+IT + SVLVDGD+H++PIAD+VR ILDGHIV++R +AE GR+P +D L SVSR+
Sbjct: 300 GPGQGSITGLFSVLVDGDDHDEPIADAVRGILDGHIVMSRKIAERGRFPAIDILKSVSRM 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +E +L  +    +  + +  ++  +G Y+ G D  +D+A+   P I D LKQ 
Sbjct: 360 LPDCHEEEENRLRLAALRHLSNYADMEELVRLGAYKSGSDAEVDEAIRLAPAIEDLLKQR 419

Query: 421 PSDLSSED-VFQEITKKL 437
             D  S    F  + + +
Sbjct: 420 KDDRGSLAHSFARLAELM 437


>gi|282890881|ref|ZP_06299398.1| type III secretion cytoplasmic ATPase SctN [Parachlamydia
           acanthamoebae str. Hall's coccus]
 gi|281499235|gb|EFB41537.1| type III secretion cytoplasmic ATPase SctN [Parachlamydia
           acanthamoebae str. Hall's coccus]
          Length = 438

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 154/432 (35%), Positives = 236/432 (54%), Gaps = 12/432 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           + E     L    G I+    +   +  +   V +G+  + + +    L +V+    + V
Sbjct: 11  IGELDDVQLTTVNGRITETVGML--IKAIVPQVKIGEVCLVKREGEPLLTEVVGFTREEV 68

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--GDDSLGKGDLSME 127
           ++ P+G    I     V        I       GRV+N LG+P+D      L   ++   
Sbjct: 69  FLSPLGEMTGIGPSSEVIPTRLPLHIKVGPQLLGRVLNGLGEPLDVATKGPLELNEV-YP 127

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           ++   P  + R+R+ +    GIR ID       GQR+G+FA +G GKST L M AR+   
Sbjct: 128 VIQAPPDPLKRKRIVEPISVGIRAIDGVLTTGLGQRVGIFAAAGGGKSTTLGMIARNAMA 187

Query: 188 DKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D  +ISL+GERGRE+R+FI +D   + LK+SV+VV+TSD++  LR  A      IAEYF 
Sbjct: 188 DVNVISLIGERGRELRDFIEKDLGPEGLKRSVLVVSTSDQASQLRLNAAYVGTAIAEYFR 247

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLER G S+   G+
Sbjct: 248 DQGKSVILMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERTGNSDV--GS 305

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  ++LV GD+ N+P+AD VRSILDGHI+L+  LA +  YP +D L+S SR+      
Sbjct: 306 ITAFYTILVAGDDMNEPVADEVRSILDGHIILSSELARQYHYPAIDVLSSASRVMPSIVP 365

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +  +LV  L  ++  +++   +  IG Y+ G D   D A+  +  +  FLKQ   +  S
Sbjct: 366 KEHLQLVGKLKEVLANYKKNELLIKIGEYKRGADKAGDFAIDHIDKVNKFLKQGVDEKCS 425

Query: 427 EDVFQEITKKLQ 438
              +QE  + L+
Sbjct: 426 ---YQETMQLLR 434


>gi|164685676|gb|ABY66784.1| atp1 [Pholisma arenarium]
          Length = 413

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKNLNSRATSESERLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|164685672|gb|ABY66782.1| atp1 [Lennoa madreporoides]
          Length = 413

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESERLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|315038010|ref|YP_004031578.1| F0F1 ATP synthase subunit alpha [Lactobacillus amylovorus GRL 1112]
 gi|325956463|ref|YP_004291875.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus 30SC]
 gi|312276143|gb|ADQ58783.1| F0F1 ATP synthase subunit alpha [Lactobacillus amylovorus GRL 1112]
 gi|325333028|gb|ADZ06936.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus 30SC]
 gi|327183290|gb|AEA31737.1| F0F1 ATP synthase subunit alpha [Lactobacillus amylovorus GRL 1118]
          Length = 503

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 180/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  V  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLND-VLAGELLKFDNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG+  + K D
Sbjct: 66  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGEGEI-KAD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +K P  M+RQ V++  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEAKAPGVMDRQSVKQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|84502399|ref|ZP_01000535.1| flagellum-specific ATP synthase [Oceanicola batsensis HTCC2597]
 gi|84389211|gb|EAQ02008.1| flagellum-specific ATP synthase [Oceanicola batsensis HTCC2597]
          Length = 450

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 183/440 (41%), Positives = 270/440 (61%), Gaps = 5/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M+     L+ LA   +       G +S+I  +  TV  L++ + +G     +GK    L 
Sbjct: 1   MKTAFSQLSTLA--RTTEGARIAGEVSAIVGLTLTVVGLNRALGIGQRCTIKGKKGPVLA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ ++     + P G    +++GD V        I P   W GRV+NALG PIDG  SL
Sbjct: 59  EVVSVDEKGTQVLPFGNWNGVTIGDRVEISTSGESIRPDLSWIGRVLNALGDPIDGLGSL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G +     +  P A  R+RV +   TG+RV D+FTPLC GQR+G+FAGSG+GKS+LLS
Sbjct: 119 HEGPVPCPPKNTPPNAYARRRVGERIDTGVRVFDVFTPLCKGQRMGIFAGSGVGKSSLLS 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D +++ LVGERGREV++FI+ D   + L +SV+VV+T DE P++R+ A  TA
Sbjct: 179 MMARRAEADVIVVGLVGERGREVQDFIQKDLGAEGLNRSVIVVSTGDEPPLMRRQAAWTA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G  VLL++DS+TRFA + REI    GE P  +GYP +VFSELP+LLER G
Sbjct: 239 TAVAEYFRDQGLQVLLLIDSVTRFAMAQREIGLAGGEPPTTKGYPPTVFSELPQLLERSG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P   EKG+ITA+ +VLVDGD+ N+P++D+ R I+DGH+VL+R++AE+GR+P V+   SVS
Sbjct: 299 PGVGEKGDITALYTVLVDGDDMNEPVSDAARGIMDGHVVLDRAIAEQGRFPAVNIQKSVS 358

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     +  E  ++ +    + R+ +  ++  IG YR G D  +D AV       +FL 
Sbjct: 359 RMLPDCHNPGEYAVLKAARRALARYADMEELIRIGAYREGSDEEIDAAVRFARPAENFLT 418

Query: 419 QSPSD-LSSEDVFQEITKKL 437
           QS ++  +SE  F ++ + L
Sbjct: 419 QSKTESTTSEQAFAKLYELL 438


>gi|320580588|gb|EFW94810.1| Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia angusta DL-1]
          Length = 593

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 104/416 (25%), Positives = 180/416 (43%), Gaps = 22/416 (5%)

Query: 27  SSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDL 86
           + I+     V  L+   C  + +V         G  + +    V I   G   E+  G++
Sbjct: 117 NQISDGIARVFGLNN--CQAEELVEFASG--VKGMALNLEPGQVGIVLFGSDREVKEGEI 172

Query: 87  VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G+    P      GRV++ALG PIDG   +     ++    K P  + R+ V +  
Sbjct: 173 VKRTGKIVDVPIGPGMLGRVVDALGNPIDGKGPIEATGYAIA-QLKAPGILPRRSVFEPM 231

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLV 195
           +TG++ +D   P+  GQR  +      GK      T+L+    +D  D       +   V
Sbjct: 232 QTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNDGNDESKKLYCVYVAV 291

Query: 196 GERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     D +K S+VV AT+ E+  L+ +AP TA  IAE+F   G + L+
Sbjct: 292 GQKRSTVAQLVQTLEQNDAMKYSIVVAATASEAAPLQYLAPFTACAIAEWFRDNGKHALI 351

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           + D +++ A + R+++      P    YP  VF    RLLER          G++TA+  
Sbjct: 352 VYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDAHGGGSLTALPV 411

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A     K++
Sbjct: 412 IETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKAMKQV 471

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             SL   + ++ E   +     +   +D    + + +   +   LKQ      + +
Sbjct: 472 AGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLSRGERLTQLLKQKQYSPQASE 524


>gi|20146554|gb|AAM12431.1| ATP synthase alpha subunit [Clethra arborea]
          Length = 399

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 169/406 (41%), Gaps = 23/406 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            K++  SL   + ++ E   +     +   +D      +++   + 
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLT 398


>gi|229522083|ref|ZP_04411500.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TM 11079-80]
 gi|229341008|gb|EEO06013.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TM 11079-80]
          Length = 439

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 236/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEQRASLNAMPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|164685318|gb|ABY66605.1| atp1 [Psorothamnus emoryi]
          Length = 413

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG   L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGVLSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|254228439|ref|ZP_04921865.1| flagellar protein export ATPase FliI [Vibrio sp. Ex25]
 gi|262393591|ref|YP_003285445.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
 gi|151939027|gb|EDN57859.1| flagellar protein export ATPase FliI [Vibrio sp. Ex25]
 gi|262337185|gb|ACY50980.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
          Length = 439

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 151/437 (34%), Positives = 237/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ   + L     +      V  G +  +  +    T       +G   + +  +     
Sbjct: 1   MQALADRLRNYKVEGLTTRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMSGQMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGARVTPLTSDAGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDHRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDGAFTLKPKLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           QS  +    D+   + +
Sbjct: 418 QSMKESVPYDMCVNMLR 434


>gi|120609073|ref|YP_968751.1| F0F1 ATP synthase subunit alpha [Acidovorax citrulli AAC00-1]
 gi|158513023|sp|A1TJ39|ATPA_ACIAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120587537|gb|ABM30977.1| ATP synthase F1 subcomplex alpha subunit [Acidovorax citrulli
           AAC00-1]
          Length = 519

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 106/445 (23%), Positives = 191/445 (42%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     +  LS+ V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVTDGIVRIHGLSE-VMQGEMLEFPATK 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPSYGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELVGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    L+  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKLTDVIEKVAPGVIARQSVDQPLQTGIKSIDAMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +   ++ A+       I   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIIAQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMEYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLVKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ  
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQPQ 440


>gi|320529382|ref|ZP_08030470.1| flagellar protein export ATPase FliI [Selenomonas artemidis F0399]
 gi|320138348|gb|EFW30242.1| flagellar protein export ATPase FliI [Selenomonas artemidis F0399]
          Length = 458

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 164/420 (39%), Positives = 238/420 (56%), Gaps = 13/420 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQ---GKNSDNLGQVIRINLDIVYICPVGIGE 79
            G ++ I  +   +      V +G+    +           +V+      V + PVG  +
Sbjct: 32  TGKVTQIIGLV--IESQGPTVTVGELCYVRSHFAGMPAVPAEVVGFREGSVLLMPVGEMQ 89

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   GR  R+       GRV++ LG PIDG   +   +    + +  P  ++R
Sbjct: 90  GIGPGCEVTATGRRLRVKVGEELLGRVLDGLGNPIDGKGPILTKE-EYPLQAPPPSPLSR 148

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            R+ +    G+R ID    L  GQRIG+ AGSG+GKSTLLSM AR+   D  +I+LVGER
Sbjct: 149 PRIGENLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEADISVITLVGER 208

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVR+FI  D   + LK+SVVVVATSD+  ++R    +T   IAEYF  +G  V+L++D
Sbjct: 209 GREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFRDRGHKVVLMMD 268

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + RE+    GE P  RGY  SVF+ LPRLLER G SE   G+IT + +VLVDG
Sbjct: 269 SVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTSE--HGSITGIYTVLVDG 326

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD+VRSILDGHIVL+R +A +  +P +D L SVSR+  +    +  +    + 
Sbjct: 327 DDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEVVPKEHLEAAQEMR 386

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L+  + E  D+  IG Y  G    +D A+ ++  I DFL Q   +++S   +++  ++L
Sbjct: 387 QLMAVYSEAEDLIHIGAYVKGSSPKIDAAIQKIEGINDFLCQDIFEVTS---YEDTERRL 443


>gi|229915398|gb|ACQ90743.1| CF1 alpha subunit of ATP synthase [Oocystis solitaria]
          Length = 507

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 105/436 (24%), Positives = 182/436 (41%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y++ + VV  G +  +      +  L + V  G+ +  +      +G  + 
Sbjct: 11  SIIRQQIKKYNQEVKVVNIGTVFQVGDGIARIYGLDK-VMAGELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GRV+N+L +PIDG   +   D
Sbjct: 67  LESKNVGAVLMGEGLTVQEGTSVRATGKIAQIPVGDKFLGRVVNSLARPIDGKGEIIP-D 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 126 GDRLIESTAPGIISRRSVYEPLQTGILSIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V A +D    L+ +AP T   
Sbjct: 186 NQKGKDVICVYVAIGQKASSIAQVLTSLQERGAMDYTIIVAAPADTPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  KG + L I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKGRHTLAIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 NDTLGGGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLSRGQRLRETLK 422

Query: 419 QSP-SDLSSEDVFQEI 433
           Q+  S LS ED    I
Sbjct: 423 QAQASPLSLEDQVATI 438


>gi|157151415|ref|YP_001450823.1| F0F1 ATP synthase subunit alpha [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|189081324|sp|A8AYG3|ATPA_STRGC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157076209|gb|ABV10892.1| ATP synthase F1, alpha subunit [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 501

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 182/428 (42%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  +  V + G ++ +         L   +  G+ +V +  +    G
Sbjct: 6   QEISALIKQQIENFQPDFDVTETGVVTYVGDGIARAHGLDNAMS-GELLVFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -ATDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L+  L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLSDGLFNGGVRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|145932350|ref|YP_001165398.1| ATP synthase F0 subunit 1 [Phytophthora sojae]
 gi|110169593|gb|ABG54059.1| ATP synthase F0 subunit 1 [Phytophthora sojae]
          Length = 509

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 102/435 (23%), Positives = 188/435 (43%), Gaps = 22/435 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           + + +   +  + + G + S++        L++ +  G+ V     N +  G  + +  D
Sbjct: 11  SNIKKYKDEKSLQETGIVLSMSDGIARCYGLTK-IQAGEMVEF--NNGNIKGMALNLEPD 67

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V +       EI  G+ V   G    +       GRV++ALG+PIDG   +    L   
Sbjct: 68  VVGVVVFSNDREIQEGNFVRRTGSIVSVPVGPEVLGRVVDALGQPIDGKGQIN-SKLESR 126

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  M R+ V++  +TG++ +D   P+  GQR  +      GK+++      +   
Sbjct: 127 VEVKAPGIMPRESVKEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAIDTIINQRE 186

Query: 188 DK----------VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
                        I   VG++   + E  +     N    SV+V AT+ +S  L+ +AP 
Sbjct: 187 PHLKKDTNNQLYCIYVGVGQKRSTIAELTKTLEEKNAMFFSVIVAATASDSAPLQYLAPY 246

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   + EYF   G + ++  D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 247 TGCALGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 306

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++   G++TA+  +     + +  I  +V SI DG I L   L  EG+ P +   
Sbjct: 307 AAKMNRKIGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNEGQRPAISVG 366

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  ++   + +F E +       +   +D    + +++   + 
Sbjct: 367 LSVSRVGSAAQIKAMKQIAGTMKLELAQFREVQ---AFAQFGSDLDATTQQQLNRGVRLT 423

Query: 415 DFLKQSPS-DLSSED 428
           + LKQ  +  LS ED
Sbjct: 424 EMLKQGLNIPLSVED 438


>gi|156618895|ref|YP_001430031.1| ATP synthase CF1 alpha subunit [Cuscuta gronovii]
 gi|190358167|sp|A7M8Y9|ATPA_CUSGR RecName: Full=ATP synthase subunit alpha, plastid; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|156555933|emb|CAM98317.1| ATP synthase CF1 alpha chain [Cuscuta gronovii]
          Length = 507

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 183/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y+K + ++  G +  +      +  L + V  G+ +  +       G  + + 
Sbjct: 13  IRERIQHYTKKINILNTGTVLQVGDGIVRIYGLDE-VMAGELIEFEEGTK---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  ++     + GRVINAL  PIDG   +   +  
Sbjct: 69  SKNVGVVLMGDGLRIKEGGSVKATGRIAQVPVGDAYLGRVINALATPIDGRGEILSSEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFAR 183
           + I S  P  ++R+ + +  +TG+  ID   P+  GQR  +      GK+ + +  +  +
Sbjct: 129 L-IDSPAPGILSRRSIYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +         + ++VV   +D +  L+ +AP T   +A
Sbjct: 188 QSKNVICVYVAIGQKASSVAQVVTTLQEKGALQYTIVVAEMADSAATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  K  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYKERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 KLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGLRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++ S L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVASKLKLELAQFAELE---AFAQFASDLDQASQNLLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|261888201|gb|ACY06056.1| ATP synthase CF0 A subunit [Volvox carteri f. nagariensis]
          Length = 508

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 107/435 (24%), Positives = 188/435 (43%), Gaps = 17/435 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +  L E Y+  +  V  G +  +      +  L + +  G+ +  +      LG  + + 
Sbjct: 13  IKDLIEQYTPEVKMVDFGIVFQVGDGIARIYGLEKAMS-GELLEFEDG---TLGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +G G +I+ G  V   G+   I     + GRV++AL +P+DG  ++   D S
Sbjct: 69  ANNVGAVLLGDGLKITEGSRVRCTGKIAEIPVGEAYLGRVVDALARPVDGKGAIVTKD-S 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR-IGVFAGSGIGKSTLL--SMFA 182
             I S  P  ++R+ V +   TG+  +D   P+  GQ+   +      GK+ +   ++  
Sbjct: 128 RAIESPAPGIVSRRSVYEPLATGLVAVDAMIPVGRGQQRELIIGDRQTGKTAIAVDTILN 187

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
           +       +   +G++   V + +           +++V+A ++E   L+ +AP T  T+
Sbjct: 188 QKGKGVICVYVAIGQKASSVAQVLNTLKERGALDYTIIVMANANEPATLQYLAPYTGATL 247

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF   G   L I D +++ A + RE++      P    YP  VF    RLLER     
Sbjct: 248 AEYFMYTGRPTLTIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLN 307

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
               +G++TA+  V     + +  I  +V SI DG I L+ SL   G  P ++   SVSR
Sbjct: 308 NALGEGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSASLFNSGLRPAINVGISVSR 367

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  SL   + +F E         +   +D      + +   + + LKQ
Sbjct: 368 VGSAAQPKAMKQIAGSLKLSLAQFAELE---AFSQFASDLDSATQAQLARGTRLREILKQ 424

Query: 420 SP-SDLSSEDVFQEI 433
              S LS ED    I
Sbjct: 425 PQASPLSLEDQVATI 439


>gi|89112894|gb|ABD61059.1| ATPase alpha subunit [Allium cepa]
          Length = 431

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 175/415 (42%), Gaps = 21/415 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 3   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 58

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 59  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIER 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----K 189
           + V +  +TG++ +D   P+  GQR  +      GK      T+L+    ++  +     
Sbjct: 118 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNESSESETLY 177

Query: 190 VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   +G++   V +F++  +  N  + S++V AT+ +   L+ +AP +   + EYF   
Sbjct: 178 CVYVAIGQKRSTVAQFVQILIEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDN 237

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGN 306
             + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+
Sbjct: 238 SMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A  
Sbjct: 298 LTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQL 357

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              K++  S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 358 KTMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVTKQPQ 409


>gi|91792685|ref|YP_562336.1| flagellum-specific ATP synthase [Shewanella denitrificans OS217]
 gi|91714687|gb|ABE54613.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
          Length = 446

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 153/435 (35%), Positives = 238/435 (54%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  L   A   S  + V  G +  +  +    +       +G     +    + + +V+ 
Sbjct: 9   LNKLKSHAGRVSPLVPVASGQLVRVVGLTLEASG--CRAPVGSLCSIETMAGELIAEVVG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
            +  ++Y+ P+     +  G  V   G    ++      GRV++  G P+DG  +L   D
Sbjct: 67  FDDKLLYLMPIEELRGVLPGARVQPLGEQSGLNVGLSLLGRVLDGNGLPLDGLGALN-TD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 QHASRHGPSINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ LVGERGREV+EFIE+ LG+    +SVVV A +D SP++R  A  T+  IA
Sbjct: 186 GTTADIIVVGLVGERGREVKEFIEEILGEHGRARSVVVAAPADTSPLMRLRACETSTRIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G NVLL++DS+TR+A + RE+A   GE P  +GYP SVF++LPRL+ER G    
Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREVALAVGEPPATKGYPPSVFAKLPRLVERAGNGGP 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D  +S+SR+A 
Sbjct: 306 GQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRRLADSGHYPAIDIESSISRVAP 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              S +  + +  +  +   +++ RD+  IG Y  G D  +D A+   P +  FL+Q   
Sbjct: 366 MVISNEHLEAMRRVKQMYSMYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAFLRQGFK 425

Query: 423 DLSSEDVFQEITKKL 437
           +  S D  Q +  ++
Sbjct: 426 EAISFDDSQLMMSQI 440


>gi|218282098|ref|ZP_03488397.1| hypothetical protein EUBIFOR_00972 [Eubacterium biforme DSM 3989]
 gi|218216891|gb|EEC90429.1| hypothetical protein EUBIFOR_00972 [Eubacterium biforme DSM 3989]
          Length = 512

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 101/437 (23%), Positives = 187/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N   +++L +   +++     + + G I ++     TV  L +   + + ++     
Sbjct: 2   MSLNPAEISKLIKAQIQSIDQDLEMNESGTILTVGDGIATVYGL-KNAMMSELLLFP--- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G V+ +  + V +  +G   +I  GD+V   G    +       GRV+NALG+PID
Sbjct: 58  HDVYGMVMNLEDEQVGVVLLGDNSDIKEGDVVKRTGHIIEVPVGDSLMGRVVNALGQPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D +  +    P  M R+ V    +TG+++ID   P+  GQR  +      GK
Sbjct: 118 GLGEI-QTDKTRPVERVAPGVMTRKSVSVPLQTGLKIIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K I   +G++   V + +E          + +V AT+ E+  L+
Sbjct: 177 TAIAIDTILNQKGQNVKCIYVAIGQKASTVAQIVEKLKQHGAMEYTTIVAATASEAAPLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E +   G++VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 237 YIAPYAGCAMGEEWMENGEDVLIVYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +    G++TA+  +     + +  I  +V SI DG I L   +  EG  P
Sbjct: 297 RLLERAARLNENYGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLKTDMFNEGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K++  SL   + ++ E         +   +D      +  
Sbjct: 357 SVDSGLSVSRVGSAAQTKAMKQVSGSLKLELAQYREME---SFAKFGSDLDASTKDVLDH 413

Query: 410 VPIIYDFLKQSPSDLSS 426
              +   L Q      +
Sbjct: 414 GARLTQLLIQKQYSPLT 430


>gi|50058577|gb|AAT69041.1| F1-ATPase alpha subunit [Convolvulus assyricus]
          Length = 430

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV         P       RV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTXSIVDVPAGKAMLXRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|228016367|gb|ACP51200.1| ATP synthase CF1 alpha subunit [Pinus thunbergii]
          Length = 507

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGKISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|145932443|ref|YP_001165355.1| ATP synthase F1 subunit alpha [Phytophthora ramorum]
 gi|110169641|gb|ABG54106.1| ATP synthase F1 subunit alpha [Phytophthora ramorum]
 gi|188038005|gb|ACD46623.1| ATP synthase F1 subunit alpha [Phytophthora ramorum]
          Length = 509

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 102/435 (23%), Positives = 188/435 (43%), Gaps = 22/435 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           + + +   +  + + G + S++        L++ +  G+ V     N +  G  + +  D
Sbjct: 11  SNIKKYKDEKSLQETGIVLSMSDGIARCYGLTK-IQAGEMVEF--NNGNIKGMALNLEPD 67

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V +       EI  G+ V   G    +       GRV++ALG+PIDG   +    L   
Sbjct: 68  VVGVVVFSNDREIQEGNFVRRTGSIVSVPVGPEVLGRVVDALGQPIDGKGQIN-SKLESR 126

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  M R+ V++  +TG++ +D   P+  GQR  +      GK+++      +   
Sbjct: 127 VEVKAPGIMPRESVKEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAIDTIINQRE 186

Query: 188 DK----------VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
                        I   VG++   + E  +     N    SV+V AT+ +S  L+ +AP 
Sbjct: 187 PHLKKDINNQLYCIYVGVGQKRSTIAELTKTLEEKNAMFFSVIVAATASDSAPLQYLAPY 246

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   + EYF   G + ++  D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 247 TGCALGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 306

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++   G++TA+  +     + +  I  +V SI DG I L   L  EG+ P +   
Sbjct: 307 AAKMNRKIGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNEGQRPAISVG 366

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  ++   + +F E +       +   +D    + +++   + 
Sbjct: 367 LSVSRVGSAAQIKAMKQIAGTMKLELAQFREVQ---AFAQFGSDLDATTQQQLNRGVRLT 423

Query: 415 DFLKQSPS-DLSSED 428
           + LKQ  +  LS ED
Sbjct: 424 EMLKQGLNIPLSVED 438


>gi|310815413|ref|YP_003963377.1| ATP synthase subunit A [Ketogulonicigenium vulgare Y25]
 gi|308754148|gb|ADO42077.1| ATP synthase subunit A [Ketogulonicigenium vulgare Y25]
          Length = 513

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/442 (21%), Positives = 179/442 (40%), Gaps = 29/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++++ +D  KN      V + G + S+      V  L   +  G+ V   G  
Sbjct: 2   MAIQAAEISKILKDQIKNFGQSAEVAEVGRVLSVGDGIARVYGL-DNIQAGEMVEFPGG- 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V +   G   +I  GD V         P      GRV++ALG P+D
Sbjct: 60  --IRGMALNLEKDNVGVVIFGSDRDIKEGDTVKRTQSIVDVPAGDGLLGRVVDALGNPLD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  +    K P  + R+ V +   TG++ +D   P+  GQR  +      GK
Sbjct: 118 GKGPIVFTERRVA-DVKAPGIIPRKSVHEPMATGLKSVDAMIPVGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
           + +      +                  +   +G++   V + ++          S+VV 
Sbjct: 177 TAIALDTILNQKSYNEAAGSDESKKLYCVYVAIGQKRSTVAQLVKKLEESGAMAYSIVVA 236

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   ++ +AP +A  +AE+F   G + L+I D +++ A + R+++      P    
Sbjct: 237 ATASDPAPMQYLAPYSATAMAEFFRDNGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 296

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      +   G++TA+  +     +    +  +V SI DG I L 
Sbjct: 297 YPGDVFYLHSRLLERSSKLNDDFGAGSLTALPIIETQAGDLAAYVPTNVISITDGQIFLE 356

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P V+   SVSR+   A +   K +   +   + ++ E   +     +   +
Sbjct: 357 TDLFYQGVRPAVNTGLSVSRVGSSAQTNAMKSVAGPIKLELAQYRE---MAAFSQFGSDL 413

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +++   + + +KQ  
Sbjct: 414 DAATQQLLNRGARLTEVMKQPQ 435


>gi|34539469|gb|AAQ74618.1| F1-ATPase alpha subunit [Triuris sp. Vergara Silva s.n.]
          Length = 412

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 172/407 (42%), Gaps = 21/407 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG P+DG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPVDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGERGR 200
           + +D   P+  GQR  +      GK      TLL+    +          +   +G++  
Sbjct: 116 KAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTLLNQKQMNSKGTSETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V +F++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQFVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSFK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 399


>gi|164685324|gb|ABY66608.1| atp1 [Pilostyles thurberi]
          Length = 413

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGLPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|164685566|gb|ABY66729.1| atp1 [Vaccinium arboreum]
          Length = 413

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|113461834|ref|YP_719903.1| F0F1 ATP synthase subunit alpha [Haemophilus somnus 129PT]
 gi|170718141|ref|YP_001785170.1| F0F1 ATP synthase subunit alpha [Haemophilus somnus 2336]
 gi|122945458|sp|Q0I5X1|ATPA_HAES1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739891|sp|B0UWG7|ATPA_HAES2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|112823877|gb|ABI25966.1| ATP synthase, F1 subunit alpha [Haemophilus somnus 129PT]
 gi|168826270|gb|ACA31641.1| ATP synthase F1, alpha subunit [Haemophilus somnus 2336]
          Length = 513

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSK-----NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +         N     G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFEVINEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYSDLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-KNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSEEYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKVVKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQYSPLS 440


>gi|78486504|ref|YP_392429.1| ATP synthase F1, alpha subunit [Thiomicrospira crunogena XCL-2]
 gi|124007223|sp|Q31DL8|ATPA_THICR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|78364790|gb|ABB42755.1| ATP synthase F1, alpha subunit [Thiomicrospira crunogena XCL-2]
          Length = 513

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 184/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +D  K           G + SI      +  +S  V  G+ V     +
Sbjct: 1   MQLNASEISNLIKDRIKGFDGAAESGSEGTVVSIADGIALIHGVSD-VMYGEMVQF---D 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + +  D V +  +G  E IS GD V   GR   +       GRV++ LG+PID
Sbjct: 57  EATFGMALNLERDSVGVVVLGEYEHISEGDKVTCTGRILEVPVGPELNGRVVDGLGRPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+    ++  I    P  + RQ V++   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGSID-AKVTSPIERIAPGVIERQSVDQPMMTGIKSIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++ ++ +   K I   +G++   V               +V+V A + +   L+
Sbjct: 176 TAIAIDAIISQKNTGVKCIYVAMGQKASTVNNVARKLEEYGAMDNTVIVAANASDPAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A      + EY+  +G++ L+I D +T+ A + R+I+      P    +P  VF    
Sbjct: 236 YLAAYAGCAMGEYYRDRGEDALIIYDDLTKQAQAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L  +G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETGLFSQGIRPAVNAGLSVSRVGGSAQTKAIKKLGGGIRLDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      + +   + + +KQ      +
Sbjct: 413 LDPATKAQLERGKRVTELMKQKQYSPLT 440


>gi|238879075|gb|EEQ42713.1| ATP synthase alpha chain, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 547

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 186/447 (41%), Gaps = 28/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-----GGYISSIT-SVYYTVTCLSQYVCLGDFVVHQGKN 55
           +     ++ + ED  + +  +      G + S+       +  L+      + V     +
Sbjct: 40  KAAPTEVSSILEDRIRGVSEEANLNETGRVLSVGRDGIARIYGLNNIQAE-ELVEF---S 95

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  D V +   G    +  G+ V   G+    P      GRV++ LG  ID
Sbjct: 96  SGAKGMALNLEADQVGVVLFGSDRLVKEGETVKRTGQIVSVPIGPELLGRVVDGLGNAID 155

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 156 GKGPIKAAAYSRA-QVKAPGILPRRSVHEPMQTGLKSVDALVPIGRGQRELIIGDRQTGK 214

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVAT 223
                  +L+    ++  D       +   VG++   V + ++     D LK SV+V AT
Sbjct: 215 TAVALDAILNQKRWNNGSDEKKKLYCVYVAVGQKRSTVAQLVQTLEQHDALKYSVIVAAT 274

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP TA  I E+F   G + L++ D +++ A + R+++      P    YP
Sbjct: 275 ASEAAPLQYIAPFTACAIGEWFRDNGRHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYP 334

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER          G++TA+  +   G + +  I  +V SI DG I L   
Sbjct: 335 GDVFYLHSRLLERAAKMSDAYGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAE 394

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 395 LFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDA 451

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + +++   +   LKQ   +  + +
Sbjct: 452 STKQTLNRGERLTQLLKQKQYNPLAAE 478


>gi|164685606|gb|ABY66749.1| atp1 [Myrtus communis]
          Length = 413

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAILGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|313576671|gb|ADR66843.1| ATPase subunit 1 [Ternstroemia gymnanthera]
          Length = 399

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 169/406 (41%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 398


>gi|325266850|ref|ZP_08133521.1| ATP synthase F1 sector alpha subunit [Kingella denitrificans ATCC
           33394]
 gi|324981591|gb|EGC17232.1| ATP synthase F1 sector alpha subunit [Kingella denitrificans ATCC
           33394]
          Length = 515

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 110/444 (24%), Positives = 187/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +NL         G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQINPAEISDLLKAKIENLNTKTEARTRGTVISVTDGIVRVYGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD V   GR    P      GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVILGEYEHITEGDEVKCTGRILEVPIGRELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINASK-TAPIEKIAPGVIARQSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   VG++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAVGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF   G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYAGCTMGEYFRDIGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINADEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|118592622|ref|ZP_01550012.1| type III secretion system ATPase [Stappia aggregata IAM 12614]
 gi|118434673|gb|EAV41324.1| type III secretion system ATPase [Stappia aggregata IAM 12614]
          Length = 460

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 155/416 (37%), Positives = 235/416 (56%), Gaps = 8/416 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICP 74
           KNL    G +S +      V  +   V +G+ V    +        +V+    +   + P
Sbjct: 38  KNLYSVNGKVSKVIGTV--VYAVVSNVRIGEIVELYTRSTGRKLEAEVVGFANNEALLYP 95

Query: 75  VGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
            G  + +S    V   G+ + +       GRVI+  G  IDG            +  K P
Sbjct: 96  FGETQGVSPQTEVRPTGKVQSVPVGEHLLGRVIDGFGNFIDGKSDECCPQTFYPVYQKPP 155

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M R+ ++    TGIR ID    L  GQRIG+FA +G+GKSTLLSM  ++   D  +++
Sbjct: 156 NPMTRRVIDAPVTTGIRAIDGLLTLGEGQRIGIFAAAGVGKSTLLSMLVKNADVDVTVMA 215

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           +VGERGREV+EFI  +   + +K++V+VV+TSD+SP+ R  A   A  +AEYF  +G  V
Sbjct: 216 MVGERGREVKEFIERELGQEGMKRTVLVVSTSDKSPMERVKASYAATAVAEYFRDQGKKV 275

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L ++DS+TRFA ++REI   +GELP  RG+P SVF+ LP+LLER+G ++K  G+ITA+ +
Sbjct: 276 LFLMDSVTRFARALREIGLAAGELPTRRGFPPSVFASLPKLLERVGMNDK--GSITAMYT 333

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+P+AD  RSILDGHI+L+  LA    +P +D L S SR+ D   S + ++L
Sbjct: 334 VLVEGDDMNEPVADETRSILDGHIILSSKLAAAHHFPAIDILNSKSRVMDMVISDEHREL 393

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +   +L+  + +   +  IG Y+ G D + D AV ++  I +FL+Q        D
Sbjct: 394 AAITRNLLAAYSDVELLVKIGEYQAGSDPVADLAVAKIQDINEFLRQGDEPFEDID 449


>gi|322434784|ref|YP_004216996.1| ATP synthase F1, alpha subunit [Acidobacterium sp. MP5ACTX9]
 gi|321162511|gb|ADW68216.1| ATP synthase F1, alpha subunit [Acidobacterium sp. MP5ACTX9]
          Length = 515

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 186/430 (43%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  E+Y + + V + G I S+      V  L + V  G+ +          G  + 
Sbjct: 11  ELLRQKIENYEQKVQVDEVGTIMSLGDGIARVHGLDK-VMAGELIDFP---HGVAGLAMN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V    +G    +  GD V   G+   +       GRV+NALG+PID    +    
Sbjct: 67  LDEDQVGAVLLGDYTLLREGDQVKRTGKIMSVPVGKELIGRVVNALGQPIDDKGPINAT- 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ +    P  ++RQ V++   TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 126 QTLPVERLAPGVIDRQSVKEPMATGIKAIDTMIPIGRGQRELLIGDRQTGKTAIALDTII 185

Query: 184 SDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +   +    I   VG++   V + ++          ++VV AT+ E   ++ +AP  A  
Sbjct: 186 NSAKNNLICIYCAVGQKRSSVAQVVQTLEEYGAMAYTIVVAATASEPAPMQYLAPFAATA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G + L+I D +++ A S REI+      P    YP  VF    RLLER    
Sbjct: 246 MGEYFRDNGMHALIIYDDLSKHAASYREISLLLRRPPGREAYPGDVFYLHSRLLERSSKV 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +     + +  I  +V SI DG I +   L   G  P V+   SVS
Sbjct: 306 SDKLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFVETDLFNSGVRPAVNVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K++ ++L   + ++ E   +     +   +D +    +++   + + LK
Sbjct: 366 RVGFAAATKATKQVGATLKLDLAQYRE---LAAFSQFGSDLDKVTQNQLNRGARLVELLK 422

Query: 419 QSPSDLSSED 428
           Q      S +
Sbjct: 423 QPQYKPLSAE 432


>gi|55824782|gb|AAV66473.1| F1-ATPase alpha subunit [Dipsacus fullonum]
          Length = 424

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKI 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|57868888|gb|AAW57440.1| ATP synthase alpha subunit [Pentamerista neotropica]
          Length = 398

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 93/406 (22%), Positives = 170/406 (41%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKASSESDRLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  SL   + ++ E   +     +   +D      +++   + +
Sbjct: 356 KQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 398


>gi|325567528|ref|ZP_08144195.1| flagellar protein export ATPase FliI [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158961|gb|EGC71107.1| flagellar protein export ATPase FliI [Enterococcus casseliflavus
           ATCC 12755]
          Length = 450

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 161/442 (36%), Positives = 236/442 (53%), Gaps = 10/442 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDN 58
           M   L   A      ++      G +S +  +   V  L+  V +G+      Q K    
Sbjct: 1   MTFELPITALRKTAQAQPFFTTYGKVSEVVGLLIKVEGLA--VFIGEICEVALQNKTHTA 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+      V + P+   E I  G LV   G+   +       G  ++ LG+P+D   
Sbjct: 59  LAEVVGFVKKTVLLMPLDQLEGIGPGCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMAL 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L        +    P    RQ++ +   TG+R ID    +  GQRIG+FAGSG+GKSTL
Sbjct: 119 DLETAS-EYPVSQDSPDPFRRQKIAEIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTL 177

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D ++I L+GERGREV+EFI  D   +  +KSVVV ATSD  P++R     
Sbjct: 178 LGMLARYCEADVIVIGLIGERGREVKEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAH 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAEY+  +G  V+L++DS+TRFA + REI  ++GE P  +GY  SVF+ LP+LLER
Sbjct: 238 VATAIAEYYRDQGKKVVLMMDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA  +VLV+GD+ N+PIAD+VR ILDGHI+L+R +A +  YP +D   S
Sbjct: 298 SGMSDK--GSITAFYTVLVEGDDMNEPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL     S ++ +    L   +  + E +D+  IG Y+ G + + D+A+     I  F
Sbjct: 356 LSRLMKTLVSEEQHEHAGELKENMAVYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRF 415

Query: 417 LKQSPSD-LSSEDVFQEITKKL 437
           L+Q   + +  E    E+    
Sbjct: 416 LQQKVDERIPFEQTIFELAHLF 437


>gi|323490919|ref|ZP_08096114.1| ATP synthase subunit alpha [Planococcus donghaensis MPA1U2]
 gi|323395399|gb|EGA88250.1| ATP synthase subunit alpha [Planococcus donghaensis MPA1U2]
          Length = 502

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 182/424 (42%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E+Y   + V   G + +I         L   +  G+ V     ++  +G    + 
Sbjct: 12  IKQQIENYQSEMKVDDVGTVITIGDGIARAHGL-DNIMAGELVEF---STGAIGMAQNLE 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   +     S
Sbjct: 68  ANNVGIIILGPYKDIKEGDEVRRTGRIMEVPVGNELIGRVVNPLGQPVDGLGPINTTK-S 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
             I S     M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++  +
Sbjct: 127 RPIESPAQGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTILNQ 186

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
           +D     I   +G++   VR  +E +  +     ++VV A++ +   L  +AP   +T+A
Sbjct: 187 ADQDMICIYVAIGQKESTVRNVVETFRKNGALDYTIVVTASASQPAPLLYLAPYAGITMA 246

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VL++ D +T+ A + RE++      P    YP  VF    RLLER     +
Sbjct: 247 EEFMFEGKHVLIVYDDLTKQASAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNE 306

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA+  V     +    I  +V SI DG I L   L   G  P ++   SVSR+
Sbjct: 307 TLGAGSITALPFVETQAGDIAAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     KK+  +L   +  F E         +   +D      + +     + LKQ 
Sbjct: 367 GGSAQIKAMKKVAGTLRLDLAAFRELE---SFSQFGSDLDAATAAKLERGKRTVEVLKQD 423

Query: 421 PSDL 424
            ++ 
Sbjct: 424 LNNP 427


>gi|88811295|ref|ZP_01126551.1| ATP synthase subunit A [Nitrococcus mobilis Nb-231]
 gi|88791834|gb|EAR22945.1| ATP synthase subunit A [Nitrococcus mobilis Nb-231]
          Length = 514

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 190/439 (43%), Gaps = 26/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + + +  E +   +  +  G + ++T     +  LSQ V  G+ +   G      G  + 
Sbjct: 11  DLIKKKIERFDIGVEARSEGAVLTLTDGIARLHGLSQ-VMQGEMIEFPGA---TYGLALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD+V   GR   +   +   GRV+NALG+PIDG   + + D
Sbjct: 67  LERDSVGAVILGDYEHIKEGDVVKCTGRIIEVPVGSGLLGRVVNALGQPIDGKGEI-EHD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  ++RQ V +  +TG++ ID   P+  GQR  +      GK+ +      
Sbjct: 126 GTSPIEKVAPGVISRQSVSQPVQTGLKAIDAMVPIGRGQRELIIGDRQTGKTAVAVDAII 185

Query: 184 S--DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +  +   K I   VG++   +   +      D L  ++VV AT+ ES  ++ +AP    +
Sbjct: 186 NQKNTGIKCIYVAVGQKASSIAAVVRKLEEHDALDHTIVVAATASESAAMQYIAPYAGCS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI--- 297
           + EYF  +G++ L+I D +T+ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 MGEYFRDRGEDALIIFDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARI 305

Query: 298 ----------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
                     G  +   G++TA+  +     + +  +  +V SI DG I L   L   G 
Sbjct: 306 NADEVEKLTKGKVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESDLFNAGI 365

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +D    + +
Sbjct: 366 RPAINAGLSVSRVGGAAQTGIIKKLGGGVRLALAQYRE---LAAFAQFASDLDETTRRQL 422

Query: 408 HQVPIIYDFLKQSPSDLSS 426
                + + +KQ      S
Sbjct: 423 EHGQRVTELMKQKQYSPMS 441


>gi|50294700|ref|XP_449761.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529075|emb|CAG62739.1| unnamed protein product [Candida glabrata]
          Length = 543

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 181/414 (43%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L+      + V      S   G  + +    V I   G    +
Sbjct: 62  ETGRVLAVGDGIARVFGLNNIQAE-ELVEFA---SGVKGMALNLEPGQVGIVLFGSDRLV 117

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G++V   G+   +       GRV++ALG PIDG   + +   +     K P  + R+ 
Sbjct: 118 KEGEIVKRTGKIVDVPVGPGLLGRVVDALGNPIDGKGPI-ESVGTARAQVKAPGILPRRS 176

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ +D   P+  GQR  +      GK      T+L+    +D  D       
Sbjct: 177 VHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVALDTILNQKRWNDGNDESKKLYC 236

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   V + ++     D LK S++V AT+ E+  L+ +AP TA +I E+F   G
Sbjct: 237 VYVAIGQKRSTVAQLVQTLEQHDALKYSIIVAATASEAAPLQYLAPFTAASIGEWFRDNG 296

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NI 307
            + L++ D +++ A + R+++      P    YP  VF    RLLER      ++G  ++
Sbjct: 297 KHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKEGAGSL 356

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 357 TALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVK 416

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + + +   +   LKQS 
Sbjct: 417 ALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLVRGERLTQLLKQSQ 467


>gi|6561695|gb|AAF17039.1|AF197707_1 ATPase alpha subunit [Carludovica palmata]
          Length = 416

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 171/411 (41%), Gaps = 21/411 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIMDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIIS 193
           +  +TG++ +D   P+  GQR  +      GK+ +      +               +  
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 QVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 403


>gi|6561629|gb|AAF16973.1|AF197641_1 ATPase alpha subunit [Cabomba sp. Qiu 97027]
          Length = 418

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 169/414 (40%), Gaps = 23/414 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++    G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNEIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER          G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           ++  SL   + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 QVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 406


>gi|51860705|gb|AAU11472.1| putative TTSS ATPase N [Photobacterium damselae subsp. piscicida]
          Length = 440

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 155/433 (35%), Positives = 232/433 (53%), Gaps = 12/433 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRIN 66
            Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+   
Sbjct: 10  TQQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQ 67

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
                + P+G    IS    V   G+   +       G++++ LG+P DG  S  +    
Sbjct: 68  QHHALLTPLGNMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGSQS-TEPSAW 126

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS 
Sbjct: 127 YPVYRDAPPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSA 186

Query: 186 CFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +++L+GERGREVREFI  D     + +SV+VVATSD   + R  A   A +IAEY
Sbjct: 187 DVDVTVLALIGERGREVREFIEHDLGEKGMARSVLVVATSDRPAMERAKAAFVATSIAEY 246

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  
Sbjct: 247 FRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK-- 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++ 
Sbjct: 305 GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQI 364

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + 
Sbjct: 365 VDKTHQASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRVFLRQGTHEP 424

Query: 425 SSEDVFQEITKKL 437
           S     +E   +L
Sbjct: 425 SE---LEETVTQL 434


>gi|94263074|ref|ZP_01286893.1| ATP synthase F1, alpha subunit [delta proteobacterium MLMS-1]
 gi|93456617|gb|EAT06725.1| ATP synthase F1, alpha subunit [delta proteobacterium MLMS-1]
          Length = 506

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/432 (22%), Positives = 182/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ +D  +       + + G + S+      V  +   + + + +      
Sbjct: 1   MQIKAEEISQIIKDQIQEYEAKVDLSETGTVLSVGDGIARVYGVENCMAM-ELLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + LG  + +  D V     G    I  GD+V   GR   +       GRV++ +G PID
Sbjct: 58  -NILGVALNLEQDNVGCAIFGDVRNIKEGDMVKRTGRIAEVPVGPEMLGRVVDGVGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S +I    P  + R+ V +   TG + +D  TP+  GQR  V     IGK
Sbjct: 117 GQGPITAKE-SRKIEVVAPGVIARKSVHEPCYTGAKAVDAMTPVGRGQRELVIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++ A+ +     I   +G++   V   +E          + VV A + +   ++
Sbjct: 176 TALCVDAIIAQKETDMHCIYVAIGQKKSTVALVVEALRQHGAMEYTTVVAACASDPAPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++     ++ EYF   G + L+I D +++ A + RE++      P    +P  +F    
Sbjct: 236 YVSAFAGTSMGEYFRDNGKHALIIYDDLSKQATAYRELSLLLRRPPGREAFPGDIFFNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERSAKLSDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A +   K++  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQAKAMKQVAGTLRLDLAQYRE---LAAFASFGSDLDAATQAQLTR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GARLVEILKQPQ 424


>gi|164685552|gb|ABY66722.1| atp1 [Pilostyles thurberi]
          Length = 413

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTTIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGLPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|312898815|ref|ZP_07758203.1| ATP synthase F1, alpha subunit [Megasphaera micronuciformis F0359]
 gi|310619977|gb|EFQ03549.1| ATP synthase F1, alpha subunit [Megasphaera micronuciformis F0359]
          Length = 511

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 104/445 (23%), Positives = 181/445 (40%), Gaps = 20/445 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  +     ++  V+      G +  +      +  L + +  G+ +      
Sbjct: 1   MNMKPEEITAIIRKQIEDYNVETNVDDVGTVLEVGDGIAHIYGLDKAMS-GELLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  + I  GD V   GR   +       GRV+N LG PID
Sbjct: 57  HNVYGLALNLEEDNVGAVLLGEDDLIKEGDTVRRTGRVMSVPVGDGMIGRVVNPLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  +     +RQ V+   +TGI+ ID   P+  GQR  +    G GK
Sbjct: 117 GKGDIQTKETRR-IEVQASGIADRQPVKVPLQTGIKAIDSMVPIGRGQRELIIGDRGTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V   +           ++VV AT+ +   L+
Sbjct: 176 TAIAIDTIINQKDSGVICIYVAIGQKASTVARVVRTLEEHGAMAYTIVVAATASDGAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V++ EYF ++G +VL + D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYAGVSMGEYFMAQGKDVLCVYDDLSKHAQAYRAMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSITALPIIETLAGDVSAYIPTNVISITDGQIFLETELFNSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGSAQIKAMKKIAGTLRLDLAQYRE---LAAFAQFGSDLDKSTKAQIDR 412

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEI 433
                  L Q     ++ ED   +I
Sbjct: 413 GERTMQMLVQPQYQPMAVEDQVMQI 437


>gi|304322937|ref|YP_003795492.1| CF1 alpha subunit of ATP synthase [Floydiella terrestris]
 gi|270048136|gb|ACZ58431.1| CF1 alpha subunit of ATP synthase [Floydiella terrestris]
          Length = 503

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 101/437 (23%), Positives = 187/437 (42%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLA----EDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ L     E+Y + + ++  G +  +      +  L + V  G+ +     +
Sbjct: 1   MKMRPEEISSLIMKQIEEYGQEVRLLDFGTVFQVGDGIARIYGLDK-VMAGELLEF---D 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              +G  + +    V    +G G +I  G  V   GR  +I     + GRV+++L +PID
Sbjct: 57  DGTVGIALNLESKNVGAVLMGDGLDIKEGMRVRATGRVAQIPVGEGYLGRVVDSLARPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK
Sbjct: 117 GKGEIQTSETRL-IDSVAPGIISRRSVHEPLQTGLVAIDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        +   +G++   V + +           +++V + +D +  L+
Sbjct: 176 TAIAIDTILNQKGKNVVCVYVAIGQKASSVAQVVTALKERGALDYTIIVASNADSAATLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  T+AE+F   G + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGATLAEFFMYTGRHTLVVYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  V     + +  I  +V SI DG I L+ SL   G  P
Sbjct: 296 RLLERAAKLSDALGSGSMTALPIVETLEGDVSAYIPTNVISITDGQIFLSASLFNGGLRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K+   SL   + ++ E +       +   +D      + +
Sbjct: 356 AINVGISVSRVGSAAQPKAMKQTAGSLKLSLAQYNELQ---AFSQFASDLDQATQNQLAR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQS     S
Sbjct: 413 GARLTELLKQSQYSPLS 429


>gi|258646350|ref|ZP_05733819.1| ATP synthase F1, alpha subunit [Dialister invisus DSM 15470]
 gi|260403748|gb|EEW97295.1| ATP synthase F1, alpha subunit [Dialister invisus DSM 15470]
          Length = 515

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 112/441 (25%), Positives = 184/441 (41%), Gaps = 16/441 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E+Y  +L V + G +  +      V  L +    G+ +          G  + 
Sbjct: 10  SVIKKQIENYKVDLNVDEVGTVLEVGDGIAHVYGL-ENCMAGELLELPNG---VYGMAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G  E I  GD+V   GR  ++       GRV+NALG+PIDG   + K D
Sbjct: 66  LEESNVGAVLLGNAETIKEGDVVKRTGRLMQVPVGNAVIGRVVNALGQPIDGRGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I  K P   +RQ V    +TG++ ID   P+  GQR  +    G GK+ +      
Sbjct: 125 AYRDIEIKAPGIADRQPVNVPLQTGLKCIDSMVPIGRGQRELIIGDRGTGKTAIAIDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V    E          S++V A + E   ++ +AP + V+
Sbjct: 185 NQKGQDVICIYVSIGQKNSNVVRVYERLRAAGAMDYSIIVHAGASEGSPMQYLAPYSGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 245 IAEHFMHQGKDVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  +     +    I  +V SI DG I L  +L   G  P ++   SVS
Sbjct: 305 SDALGGGSITALPIIETLAGDVGAYIPTNVISITDGQIYLETALFYSGIRPAINVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + +F E   +     +   +D      + +     + LK
Sbjct: 365 RVGGSAQIKAMKQVAGTLRLDLAQFRE---LAAFAQFGSDLDAATKAQIDRGQRTTEILK 421

Query: 419 QSP-SDLSSEDVFQEITKKLQ 438
           Q   S    ED    I   ++
Sbjct: 422 QPQYSPYPVEDQVMAIYTAVK 442


>gi|198243404|ref|YP_002215717.1| type III secretion system ATPase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197937920|gb|ACH75253.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 443

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 229/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 33  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 88

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 89  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 147 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 206

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 207 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 266

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 267 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 324

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 325 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 384

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            + E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 385 LYLEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 440


>gi|241765092|ref|ZP_04763083.1| ATP synthase F1, alpha subunit [Acidovorax delafieldii 2AN]
 gi|241365284|gb|EER60112.1| ATP synthase F1, alpha subunit [Acidovorax delafieldii 2AN]
          Length = 517

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 104/445 (23%), Positives = 191/445 (42%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S++     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVSDGIVRVHGLSD-VMQGEMLEFPATK 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPSFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELVGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKLTDVIEKVAPGVIARKSVDQPLQTGLKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +   ++ A+       I   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIIAQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMDYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLVKNLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDEATRKQLERGARVTELLKQAQ 440


>gi|227877279|ref|ZP_03995352.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus JV-V01]
 gi|295692631|ref|YP_003601241.1| ATP synthase subunit alpha [Lactobacillus crispatus ST1]
 gi|227863135|gb|EEJ70581.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus JV-V01]
 gi|295030737|emb|CBL50216.1| ATP synthase subunit alpha [Lactobacillus crispatus ST1]
          Length = 506

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +  G+ +     +    G    
Sbjct: 13  SLIKQQLEHYDDKLDISEVGVVTYVGDGIARAHGLNDVLS-GELLKFDNGS---YGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            S  I +K P  M+RQ V++  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 128 KSRPIEAKAPGVMDRQSVDQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   VG++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 188 NQKGQDVICIYVAVGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGRDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 308 NDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 368 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 424

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 425 QPLHDP 430


>gi|167573412|ref|ZP_02366286.1| type III secretion system ATPase [Burkholderia oklahomensis C6786]
          Length = 444

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +  +  
Sbjct: 2   NALTDLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRSASGV 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            L   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LLQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGDGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGPLDY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E  +G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--RGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQITTREHVGTAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RTFLNQRTDEYSPPDATLAALHEL 440


>gi|294668636|ref|ZP_06733732.1| ATP synthase F1, alpha subunit [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309398|gb|EFE50641.1| ATP synthase F1, alpha subunit [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 515

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 109/444 (24%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELLKAKIENLDTKQEIHTRGTVISVTDGIVRVHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR    P      GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAVVLGEYEHIKEGDEVKCTGRILEVPIGRELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPID-TKLTAPIEKIAPGVIARQSVDQPMQTGVKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   VG++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVVCIYVAVGQKASSIANVVRKLEEYGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINADEVEKLTGGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNSGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYREL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|254240042|ref|ZP_04933364.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           2192]
 gi|126193420|gb|EAZ57483.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           2192]
          Length = 440

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 157/419 (37%), Positives = 234/419 (55%), Gaps = 12/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G ++ +T        +   V +G+    +  +     L +VI        + P+G    +
Sbjct: 26  GRVTQVTGTLLK--AVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGV 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   R++      G+V++ LG+P DG            +    PP M+R+ 
Sbjct: 84  SSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPA-AWYPVYRDAPPPMSRRL 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+    G+R ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGR
Sbjct: 143 IERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGR 202

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D     L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+
Sbjct: 203 EVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSL 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G SE  +G+ITA+ +VLV+GD+
Sbjct: 263 TRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSE--RGSITALYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++P+AD  RSILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   
Sbjct: 321 MSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREW 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + ++EE   +  IG Y+ G D   D+A+ ++  I  +L+Q   + S    + +   +L+
Sbjct: 381 LAKYEEVELLLKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETSD---YAQACAQLR 436


>gi|19920165|gb|AAM08597.1|AC092750_31 Putative ATPase alpha subunit from chromosome 10 chloroplast
           insertion [Oryza sativa Japonica Group]
 gi|21327357|gb|AAM48262.1|AC122148_15 Putative ATPase alpha subunit from chromosome 10 chloroplast
           insertion [Oryza sativa Japonica Group]
 gi|31431478|gb|AAP53251.1| ATP synthase alpha chain, putative [Oryza sativa Japonica Group]
          Length = 507

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 186/437 (42%), Gaps = 16/437 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L +  E +++ + ++  G +  +      +  L + +  G+ V          G  +
Sbjct: 10  HKILRERIEQHNRKVGIENIGRVVQVGDGIARIIGLGEIMS-GELVEFAEG---TRGIAL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   
Sbjct: 66  SLESKNVGIVLMGDGLMIQEGSFVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEIVAS 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +   
Sbjct: 126 ESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V   +  +  +     ++VV   +D    L+ +AP T  
Sbjct: 185 LNQKGQDVICVYVAIGQRASSVARVVTTFHEEGAMEYTIVVAEMADSPATLQYLAPYTGA 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +  ++L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYREWHILIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                 +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SV
Sbjct: 305 LNSLLGEGSMTALPIVETQSGDVSVYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++       + +F E +       +   +D      + +   + + L
Sbjct: 365 SRVGSAAQIKAMKQVAGKSKLELAQFAELQ---AFAQFASALDKTSQNQLARGRRLRELL 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQS  + L  E+    I
Sbjct: 422 KQSQANPLPVEEQIATI 438


>gi|89112870|gb|ABD61047.1| ATPase alpha subunit [Simmondsia chinensis]
          Length = 433

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 4   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 59

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 60  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 119 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESET 178

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 179 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 238

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 239 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 298

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A
Sbjct: 299 GSLTALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 358

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 359 QLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 412


>gi|262045808|ref|ZP_06018772.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus MV-3A-US]
 gi|293381677|ref|ZP_06627658.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 214-1]
 gi|260573767|gb|EEX30323.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus MV-3A-US]
 gi|290921724|gb|EFD98745.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 214-1]
          Length = 503

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDISEVGVVTYVGDGIARAHGLNDVLS-GELLKFDNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            S  I +K P  M+RQ V++  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KSRPIEAKAPGVMDRQSVDQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   VG++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAVGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGRDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 NDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|328468722|gb|EGF39704.1| F0F1 ATP synthase subunit alpha [Lactobacillus helveticus MTCC
           5463]
          Length = 503

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 178/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLNNALA-GELLKFDNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LDSSDVGIIILGQFDNIREGDRVQRTGRIMSVPVGDALIGRVVNPLGQPVDGLGEI-KSD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEEKAPGVMDRQSVNQPLQTGIKAIDALAPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + +     I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKNQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATKAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|313576685|gb|ADR66850.1| ATPase subunit 1 [Vaccinium oxycoccos]
          Length = 399

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 169/406 (41%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRGTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 398


>gi|251797442|ref|YP_003012173.1| ATPase, FliI/YscN family [Paenibacillus sp. JDR-2]
 gi|247545068|gb|ACT02087.1| ATPase, FliI/YscN family [Paenibacillus sp. JDR-2]
          Length = 441

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 160/440 (36%), Positives = 248/440 (56%), Gaps = 10/440 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQ 61
            L++   + +    + V   G ++ +     TV        +GD  +            +
Sbjct: 5   KLDSSKYMDQLRHLDPVRVNGKVTQVIG--LTVESEGPDASIGDVCLIYPAKGAKPIKAE 62

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V+    + V + P+G    IS G  V   G+   +   +   G+V++ LGKP+DG   L 
Sbjct: 63  VVGFRDNKVILMPLGELHAISPGCDVVGTGKPLSVQVGSELLGKVLDGLGKPLDGS-FLP 121

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                    ++    + R RV++    G+R ID    +  GQR+G+FAGSG+GKSTLL M
Sbjct: 122 SRMQQYSTHNEPSNPLARPRVQETLSIGVRAIDGLLTVGRGQRVGIFAGSGVGKSTLLGM 181

Query: 181 FARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR+   D  +I+L+GERGREV EFI +D   + L +SVV+VATSD+  ++R    L A 
Sbjct: 182 IARNTSADVNVIALIGERGREVLEFIEKDLGPEGLARSVVIVATSDQPALIRIKGALIAT 241

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAEYF  +G NV+L++DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G 
Sbjct: 242 SIAEYFRDRGLNVMLMMDSVTRYAMAQREVGLAIGEPPATRGYTPSVFATLPKLLERAGT 301

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVLNR LA +G +P +D LASVSR
Sbjct: 302 GPN--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRQLANKGHFPAIDVLASVSR 359

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +  + + ++  + L  L+  + ++ D+  IG Y+ G +  +D A+  +  IY F +Q
Sbjct: 360 VMKEIVTEEHQEAANELKMLLSVYRDSEDLINIGAYQRGTNEKIDTAIENIDAIYQFTRQ 419

Query: 420 SPSD-LSSEDVFQEITKKLQ 438
             ++ ++  D  + + ++  
Sbjct: 420 KTNEKVTLADSKERLLQEFH 439


>gi|50058629|gb|AAT69067.1| F1-ATPase alpha subunit [Nicotiana tabacum]
          Length = 430

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 359 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 408


>gi|108804476|ref|YP_644413.1| ATP synthase F1 subunit alpha [Rubrobacter xylanophilus DSM 9941]
 gi|118573489|sp|Q1AVH7|ATPA_RUBXD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|108765719|gb|ABG04601.1| ATP synthase F1, alpha subunit [Rubrobacter xylanophilus DSM 9941]
          Length = 526

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 104/427 (24%), Positives = 178/427 (41%), Gaps = 13/427 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVI 63
             L     DY   +  +  G +  +      V  LS  V   + V  +  +    +G  +
Sbjct: 11  SILKGAITDYESRVRTEEVGQVLEVGDGIARVHGLS-NVMYQEMVEFEDARGEKVIGLAL 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +   G    I  G  V   GR   +       GRVINALG+PIDG   + + 
Sbjct: 70  NLEEDNVGVIIAGDDRYILEGSTVRRTGRLASVPVGQGVLGRVINALGQPIDGRGEI-QA 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
           + +  +    P  + R+ V+   +TGI+ ID   P+  GQR  +      GK+ L   ++
Sbjct: 129 EETRPVEIIAPGIIRRKDVDTPLQTGIKAIDSMIPIGRGQRELIIGDRKTGKTALAVDTI 188

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
             + D   K I   VG++   V   +           + V+ A++ +   L+ +AP    
Sbjct: 189 INQHDQNVKCIYVAVGQKDSAVAGVVAQLEEYGAMEYTTVINASASQPAPLQYLAPYAGC 248

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF  +G++ L+I D +++ A + R++       P    YP  +F    RLLER   
Sbjct: 249 AIGEYFMHRGEDALVIYDDLSKHAVAYRQMMLLLRRPPGREAYPGDIFYLHSRLLERAAR 308

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G++TA+  +     + +  I  +V SI DG I L+  L    + P +D   SV
Sbjct: 309 MSEEYGGGSLTALPIIETKAGDISAYIPTNVISITDGQIFLDLDLFNANQRPAIDVGLSV 368

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  +L   + ++ E   +     +   +D    + + +   +   L
Sbjct: 369 SRVGSSAQIKAMKKVAGTLKLDLSQYRE---LASFAQFGSDLDKATQETLARGERLTALL 425

Query: 418 KQSPSDL 424
           KQ   D 
Sbjct: 426 KQRERDP 432


>gi|20070091|gb|AAM01188.1| H+-ATPase cytoplasmic F1-part alpha-subunit [Streptococcus
           thermophilus]
          Length = 501

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GEALEFSNG---VFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+PIDG   +
Sbjct: 62  MAQNLESNDVGIIILGDFYTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPIDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
            K   +  + +  P  M R+ V +  +TG++ +D   P+  GQR  +      GK+   +
Sbjct: 122 -KTTATRPVEAPAPGVMQRKSVSEPLQTGLKAVDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  +       I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDVICIYVAIGQKESTVRTQVESLRKHGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKLSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPLH 425


>gi|302390544|ref|YP_003826365.1| ATP synthase F1 subcomplex alpha subunit [Thermosediminibacter
           oceani DSM 16646]
 gi|302201172|gb|ADL08742.1| ATP synthase F1 subcomplex alpha subunit [Thermosediminibacter
           oceani DSM 16646]
          Length = 528

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/432 (22%), Positives = 173/432 (40%), Gaps = 15/432 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  +      Y K L + + GY+ S+      V  L +    G+ +   G      G  +
Sbjct: 11  ISIIEDRIRGYGKKLNIEETGYVVSVGDGIARVYGL-KRAMAGELLEFPGG---VHGIAM 66

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V    +G    I  GD V   GR   +       GRV++ALG+PIDG   +   
Sbjct: 67  NLEEDSVGCVLLGPDSMIKEGDEVRLTGRVVEVPVGEELLGRVVSALGEPIDGKGPIN-S 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
                I    P    R+ V     TGI+ ID   P+  GQR  +      GK+ +   ++
Sbjct: 126 KKKRPIEYPAPGVTERRPVNTPLMTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIALDTI 185

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
             +       +   +G++   V   +E    +     ++VV AT+ ES  ++ +AP    
Sbjct: 186 LNQKGKGVLCVYVAIGQKSSTVARIVESLRENGAMDYTIVVAATASESAPIQYIAPFAGC 245

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AE F   G + L++ D +++ A + R ++      P    +P  +F    RLLER   
Sbjct: 246 AMAEEFMYNGKDALIVYDDLSKHAIAYRAMSLLLRRPPGREAFPGDIFYLHSRLLERSAC 305

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             K+   G++T +  V     + +  I  ++ SI DG I L   L   G  P ++   SV
Sbjct: 306 LSKKMGGGSMTTLPIVETQAGDVSAYIPTNIISITDGQIYLEPELFHAGVRPAINAGLSV 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++   +   + ++ E   +     +   +D      + +   I + L
Sbjct: 366 SRVGGAAQFKIMKQVAGRVRLDLAQYRE---LAAFAEFGMELDSETRARLARGERIVEIL 422

Query: 418 KQSPSDLSSEDV 429
           KQ   +    + 
Sbjct: 423 KQDQYEPQELES 434


>gi|164685560|gb|ABY66726.1| atp1 [Cytinus ruber]
          Length = 413

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSETAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|319947324|ref|ZP_08021557.1| ATP synthase F1 sector alpha subunit [Streptococcus australis ATCC
           700641]
 gi|319746566|gb|EFV98826.1| ATP synthase F1 sector alpha subunit [Streptococcus australis ATCC
           700641]
          Length = 501

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 106/434 (24%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFQPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+    P      GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETTDVGIIILGDFTDIREGDSIRRTGKIMEVPAGDALIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
              D    + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+   +
Sbjct: 122 V-TDKFRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSIAI 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRKYGAMDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L  SL   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPIIETQAGDISAYIATNVISITDGQIFLQDSLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +  + +
Sbjct: 418 EVLKQPVHEPLTVE 431


>gi|225375320|ref|ZP_03752541.1| hypothetical protein ROSEINA2194_00945 [Roseburia inulinivorans DSM
           16841]
 gi|225212809|gb|EEG95163.1| hypothetical protein ROSEINA2194_00945 [Roseburia inulinivorans DSM
           16841]
          Length = 436

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 160/444 (36%), Positives = 252/444 (56%), Gaps = 18/444 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSD 57
           M        +LAE+       + G +  I     T+  +     L D       +   + 
Sbjct: 1   MDSRYNKYLRLAEN---TYFKRLGKVVKIVG--LTIESVGPDAKLNDLCRIIIDENAGTV 55

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKP--ID 114
            + +V+      + + P    E I +G +V + G    +S      G  ++ +G+P  ID
Sbjct: 56  VMAEVVGFRDKRLLLMPYESVEGIGVGCIVENTGHPLSVSVGNELLGHTLDGIGRPTDID 115

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
                 +      + ++ P  M+R+ + +    G++ +D    +  GQRIG+FAGSG+GK
Sbjct: 116 KL----ETPYEYPVDAQPPDPMSRKIISEVLPLGVKAVDGLITVGKGQRIGIFAGSGVGK 171

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR+   D  +I+L+GERGREVREF+  D   + +K+S+VVVATSD+  ++RK 
Sbjct: 172 STLLGMFARNTKADINVIALIGERGREVREFVERDLGEEGMKRSIVVVATSDKPALIRKK 231

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A +TA +IAEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP SV+SE+P+L
Sbjct: 232 AAMTATSIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKL 291

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G S+K  G+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L  +  YP +D 
Sbjct: 292 LERAGTSDK--GSITGLYTVLVDGDDFNEPITDTARSILDGHIMLSRKLGHKNHYPAIDI 349

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+     + + K+L   L +++  + E  D+  IG Y+ G +  +D A+ ++  +
Sbjct: 350 LQSISRVMSSIATPEHKELAGRLKNVLATYNEAEDLINIGAYKSGSNRNIDYAIQKIDAV 409

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
            DFL Q   +    +   ++ + L
Sbjct: 410 NDFLMQKTDEKFQFEQEIDLLRAL 433


>gi|9695382|ref|NP_037604.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|6692635|gb|AAF24778.1|U17009_10 ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|58012140|gb|AAW62548.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|58201979|gb|AAW67034.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
 gi|58202026|gb|AAW67080.1| ATP synthase F1 subunit alpha [Phytophthora infestans]
          Length = 509

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 102/435 (23%), Positives = 188/435 (43%), Gaps = 22/435 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           + + +   +  + + G + S++        L++ +  G+ V     N +  G  + +  D
Sbjct: 11  SNIKKYKDEKSLQETGIVLSMSDGIARCYGLTK-IQAGEMVEF--NNGNIKGMALNLEPD 67

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V +       EI  G+ V   G    +       GRV++ALG+PIDG   +    L   
Sbjct: 68  VVGVVVFSNDREIQEGNFVRRTGSIVSVPVGPEVLGRVVDALGQPIDGKGQIN-SKLESR 126

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  M R+ V++  +TG++ +D   P+  GQR  +      GK+++      +   
Sbjct: 127 VEVKAPGIMPRESVKEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAIDTIINQRE 186

Query: 188 DK----------VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
                        I   VG++   + E  +     N    SV+V AT+ +S  L+ +AP 
Sbjct: 187 PHLKKDTNNQLYCIYVGVGQKRSTIAELTKTLEEKNAMFFSVIVAATASDSAPLQYLAPY 246

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   + EYF   G + ++  D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 247 TGCALGEYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 306

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++   G++TA+  +     + +  I  +V SI DG I L   L  EG+ P +   
Sbjct: 307 AAKMNRKIGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNEGQRPAISVG 366

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  ++   + +F E +       +   +D    + +++   + 
Sbjct: 367 LSVSRVGSAAQIKAMKQIAGTMKLELAQFREVQ---AFAQFGSDLDATTQQQLNRGVRLT 423

Query: 415 DFLKQSPS-DLSSED 428
           + LKQ  +  LS ED
Sbjct: 424 EMLKQGLNIPLSVED 438


>gi|254523465|ref|ZP_05135520.1| ATP synthase F1, alpha subunit [Stenotrophomonas sp. SKA14]
 gi|219721056|gb|EED39581.1| ATP synthase F1, alpha subunit [Stenotrophomonas sp. SKA14]
          Length = 515

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/440 (22%), Positives = 187/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L ++  + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISELIKNRIEKVKLAAESRNEGTVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYEHLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG  DL+  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 PLG-TDLTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   +   +     +     ++VV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTIANIVRKLEENGALAHTIVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYSGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTEGKVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|27461587|gb|AAM95210.1| ATPase F1 alpha subunit [Juncus sp. JID-2002]
          Length = 411

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/409 (23%), Positives = 174/409 (42%), Gaps = 22/409 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +LG+ +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGRAMLGRVVDALGVPIDGKGALGEHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGER 198
           ++ +D   P+  GQR  +      GK+ +          ++   + +     +   VG++
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAVGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N    SV+V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFCLHSRLLERASKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           L   + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 401


>gi|246880744|gb|ACS95056.1| ATP synthase CF1 alpha subunit [Dunaliella salina]
          Length = 504

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 185/426 (43%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +  L E+Y+  +  V  G +  +      +  L + V  G+ +  +      LG  + + 
Sbjct: 13  IKDLIEEYTPEVKMVDFGIVFQVGDGIARIYGLER-VMSGELLEFEDG---TLGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +G G +I+ G  V   GR   I     + GRV+N+L +P+DG   +   D S
Sbjct: 69  ANNVGGVLLGDGLKITEGSRVRCTGRIAEIPVGEAYLGRVVNSLAQPVDGKGPINTTD-S 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
             I +  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ +   ++  +
Sbjct: 128 RAIEAAAPGIVSRRSVYEPLQTGLVSVDSMIPVGRGQRELIIGDRQTGKTAIGVDTILNQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           +++V++T++E   L+ +AP T  T+A
Sbjct: 188 KGKGVICVYVAIGQKASSVAQVLTTLKERGALDYTIIVMSTANEPATLQYLAPYTGATLA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G   L + D +++ A + RE++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYTGRPTLCVYDDLSKQAAAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNT 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGEGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSSGLFNSGLRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  SL   + +F E         +   +D      + +   + + LKQ 
Sbjct: 368 GSSAQFKAMKQVAGSLKLALAQFGELE---AFSQFASDLDQATQNQLARGYRLREILKQP 424

Query: 421 PSDLSS 426
            S   S
Sbjct: 425 QSSPYS 430


>gi|227903656|ref|ZP_04021461.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus ATCC
           4796]
 gi|227868543|gb|EEJ75964.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus ATCC
           4796]
          Length = 506

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 177/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L   +  G+ +     +    G    
Sbjct: 13  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLDDVLS-GELLKFDNGS---FGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KSD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 128 KTRPIEAKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 188 NQKGQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 308 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 368 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 424

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 425 QPLHDP 430


>gi|167566310|ref|ZP_02359226.1| type III secretion system ATPase [Burkholderia oklahomensis EO147]
          Length = 444

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 165/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +  +  
Sbjct: 2   NALTDLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRSASGV 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            L   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LLQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGDGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGPLDY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +++L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDINVVALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E  +G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--RGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQITTREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RTFLNQRTDEYSPPDATLAALHEL 440


>gi|27461599|gb|AAM95216.1| ATPase F1 alpha subunit [Anomochloa marantoidea]
          Length = 418

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/409 (23%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----------STLLSMFARSDCFDKVIISLV 195
           TG++ +D   P+  GQR  +      GK             + S    S      +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNSSETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|74211198|dbj|BAE37675.1| unnamed protein product [Mus musculus]
          Length = 472

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/402 (24%), Positives = 174/402 (43%), Gaps = 22/402 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L + V   + V     +S   G  + +  D V +   G  + I  GD+V   G  
Sbjct: 1   ARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDVVKRTGAI 56

Query: 94  R-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
             +       GRV++ALG  IDG   +G       +  K P  + R  V +  +TGI+ +
Sbjct: 57  VDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRISVREPMQTGIKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGERGREV 202
           D   P+  GQR  +      GK      T+++    +D  D       I   +G++   V
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTV 175

Query: 203 REFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G + L+I D +++
Sbjct: 176 AQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    YP  VF    RLLER          G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V SI DG I L   L  +G  P ++   SVSR+   A +   K++  ++   
Sbjct: 296 VSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 356 LAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 394


>gi|311103596|ref|YP_003976449.1| ATP synthase F1 subunit alpha [Achromobacter xylosoxidans A8]
 gi|310758285|gb|ADP13734.1| ATP synthase F1, alpha subunit [Achromobacter xylosoxidans A8]
          Length = 513

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASADVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NVFGLALNLERDSVGAVILGDYTGVSEGDQVKTTGRILEVPVGPELKGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVNAKATDI-IEKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|163854645|ref|YP_001628943.1| F0F1 ATP synthase subunit alpha [Bordetella petrii DSM 12804]
 gi|190358240|sp|A9HY40|ATPA_BORPD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|163258373|emb|CAP40672.1| ATP synthase alpha chain [Bordetella petrii]
          Length = 513

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 101/446 (22%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     +   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASADIRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +       GRV+N LG PID
Sbjct: 58  -NVFGVALNLERDSVGAVILGDYTGVSEGDQVKTTGRILEVPVGPELKGRVVNTLGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIDTKETDI-IEKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|6561659|gb|AAF17003.1|AF197671_1 ATPase alpha subunit [Asarum canadense]
          Length = 425

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +    +H+   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALLHRGARLTEVPKQPQYEP 409


>gi|115526263|ref|YP_783174.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisA53]
 gi|115520210|gb|ABJ08194.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris
           BisA53]
          Length = 441

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 165/436 (37%), Positives = 257/436 (58%), Gaps = 7/436 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR 64
           + LA    D     V+  G +  +  +   +      + +G  +V + G N     +VI 
Sbjct: 2   KALADQIGDLDG--VMMYGRVVGVRGLMVEIAGPIHAMSVGARIVIETGVNRLIPCEVIG 59

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            + +   + P    E +  G   V      ++ PSA W GRV+NA+G+PIDG   L +G 
Sbjct: 60  FSGNNAVVMPFAGLEGVRRGCRAVIANAAAQVRPSAAWLGRVLNAMGEPIDGKGPLSQGP 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M+  +  PPA +R+RV      G+R ++ F   C GQR+G+FAGSG+GKS LLSM AR
Sbjct: 120 SPMQFRNAPPPAHSRKRVGAPLDLGVRALNTFLTCCRGQRMGIFAGSGVGKSVLLSMLAR 179

Query: 184 SDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D  +I LVGERGREV+EF++ D   + L +SVVVVATSDE  ++R+ A    + IA
Sbjct: 180 NVDADVSVIGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAIA 239

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +  +VL ++DS+TRFA + REI  ++GE P A+GY  +VF+ELP+LLER GP  +
Sbjct: 240 EYFRDEEKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPTVFTELPKLLERAGPGLR 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR   
Sbjct: 300 -EGTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINILKSVSRTMP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K+       ++     ++  + +  ++  +G YR G    +D+++     + ++L+Q   
Sbjct: 359 KSADPAYLPIIKRARQIMGTYSDMEELIRLGAYRAGSSPEVDESIQLHEPLENYLRQGKG 418

Query: 423 DLSS-EDVFQEITKKL 437
           + +S  + + ++ + L
Sbjct: 419 EATSLREGYAQLEQML 434


>gi|313576667|gb|ADR66841.1| ATPase subunit 1 [Vaccinium uliginosum]
 gi|313576687|gb|ADR66851.1| ATPase subunit 1 [Ternstroemia peduncularis]
          Length = 399

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 169/406 (41%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVAFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRGTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 398


>gi|259501677|ref|ZP_05744579.1| ATP synthase F1 [Lactobacillus iners DSM 13335]
 gi|302191115|ref|ZP_07267369.1| F0F1 ATP synthase subunit alpha [Lactobacillus iners AB-1]
 gi|309805640|ref|ZP_07699681.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 09V1-c]
 gi|309806263|ref|ZP_07700276.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 03V1-b]
 gi|309808051|ref|ZP_07701969.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 01V1-a]
 gi|312871609|ref|ZP_07731701.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 3008A-a]
 gi|312871990|ref|ZP_07732072.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 2062A-h1]
 gi|312873860|ref|ZP_07733903.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 2052A-d]
 gi|312874631|ref|ZP_07734655.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 2053A-b]
 gi|329921129|ref|ZP_08277652.1| ATP synthase F1, alpha subunit [Lactobacillus iners SPIN 1401G]
 gi|259166962|gb|EEW51457.1| ATP synthase F1 [Lactobacillus iners DSM 13335]
 gi|308165000|gb|EFO67242.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 09V1-c]
 gi|308167247|gb|EFO69413.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 03V1-b]
 gi|308168653|gb|EFO70753.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 01V1-a]
 gi|311089861|gb|EFQ48281.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 2053A-b]
 gi|311090642|gb|EFQ49043.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 2052A-d]
 gi|311092567|gb|EFQ50929.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 2062A-h1]
 gi|311092834|gb|EFQ51186.1| ATP synthase F1, alpha subunit [Lactobacillus iners LEAF 3008A-a]
 gi|328935036|gb|EGG31525.1| ATP synthase F1, alpha subunit [Lactobacillus iners SPIN 1401G]
          Length = 503

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 111/431 (25%), Positives = 179/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+YS+ L V + G ++ +         L   +   + +     +    G    
Sbjct: 10  ALIKQQLENYSEKLNVDEVGTVTYVGDGIARAHGLDNVLS-SELLEFSNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   G+   +       GRV+N LG+P+DG   + K  
Sbjct: 66  LEANDVGIIILGKFDDIREGDQVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGEI-KTT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+ L      
Sbjct: 125 KTRPIESKAPGVMERQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALAIDTII 184

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V+  ++       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQNVICIYVAIGQKESTVKNSVQTLKRFGAMDYTIVVQAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A S REI+      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVSYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 SKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLESDLFFAGTRPAVNAGESVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQATQAKLNRGRRTVEVLK 421

Query: 419 QSPSD-LSSED 428
           Q     L  ED
Sbjct: 422 QPLHKTLPVED 432


>gi|297621352|ref|YP_003709489.1| F-type ATP synthase, subunit alpha [Waddlia chondrophila WSU
           86-1044]
 gi|297376653|gb|ADI38483.1| F-type ATP synthase, subunit alpha [Waddlia chondrophila WSU
           86-1044]
          Length = 507

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 179/431 (41%), Gaps = 19/431 (4%)

Query: 1   MQKNLET----LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N +     L Q  E +  ++ ++  G +  +      +  L+  V + + V      
Sbjct: 1   MQLNPKEISWVLTQEIESFEDHVKLESVGRVIQVGDGIAQIWGLND-VMVSELVEFPDG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +  D V +  +G G+EI   D+V        +       GRVI  LG+P+D
Sbjct: 59  --TQGIALNLETDTVGVIILGSGQEIKEHDIVKRKHAVVSVPVGDELLGRVITPLGQPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    +   +    P    R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINASQMR-PVECTAPGVTQRMPVCEPLQTGIKAIDAMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           +TL+  ++  + +     I   +G++   +  F+        ++ + +V  ++ +S  L+
Sbjct: 176 TTLILDTILNQKNQGVHCIYVAIGQKLSTIANFVSILEHHGAMEYTTIVATSAADSASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A  + E+   +G + +   D +++ A + R++A      P    YP  +F    
Sbjct: 236 YLAPYAATAMGEHDMYQGKHAICFYDDLSKHAQAYRQLALLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     KE   G++T++  +     +    I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLNKELGGGSLTSIPVIETQASDVATYIPTNVISITDGQIFLESDLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   S SR+  KA +   KK+  SL   +  + E   +         +D      + +
Sbjct: 356 AINVSLSASRVGGKAQTKAMKKVAQSLRLDLALYRE---LAAFVQLGADLDETTKAQLIR 412

Query: 410 VPIIYDFLKQS 420
              + + LKQ+
Sbjct: 413 GERMVEILKQN 423


>gi|295425478|ref|ZP_06818171.1| ATP synthase F1 sector alpha subunit [Lactobacillus amylolyticus
           DSM 11664]
 gi|295064817|gb|EFG55732.1| ATP synthase F1 sector alpha subunit [Lactobacillus amylolyticus
           DSM 11664]
          Length = 506

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G ++ +         L+  +   + +  +  +    G    
Sbjct: 13  SLIKQQLEHYDDKLDVNEVGVVTYVGDGIARAHGLNNVLS-NELLEFENGS---YGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   G+  R+       GRV+N LG+P+DG   + K D
Sbjct: 69  LEANDVGIIILGNFDDIREGDRVKRTGQIMRVPVGDALIGRVVNPLGQPVDGLGEI-KTD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I SK P  M+RQ V++  +TGI+ ID   P+  GQR  +      GK++L      
Sbjct: 128 KTRPIESKAPGVMDRQSVDEPLQTGIKAIDALVPIGKGQRELIIGDRKTGKTSLAIDTIL 187

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   VG++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 188 NQKGKDVICIYVSVGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 308 SDKLGGGSMTALPFIQTEAGDISAYIPTNVISITDGQIFLRSDLFFAGTRPAIDAGNSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E         +   +D      + +     + LK
Sbjct: 368 RVGGNAQIKAMKKVAGTLRTDLAAYRELE---SFAEFGSDLDQATQAKLKRGRRTVEVLK 424

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 425 QPLHDP 430


>gi|169832276|ref|YP_001718258.1| ATP synthase F1 subunit alpha [Candidatus Desulforudis audaxviator
           MP104C]
 gi|226739870|sp|B1I6J9|ATPA_DESAP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169639120|gb|ACA60626.1| ATP synthase F1, alpha subunit [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 507

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 173/435 (39%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ +     +   VQ      G +  I      V  L +     + +   G  
Sbjct: 1   MNLRPEEISSIIRQQIEKYEVQVEVTDVGTVIQIGDGVARVYGL-EDCMYSELLEFPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
              LG  + +  D +    +G    I  GD+V   GR   +       GRV+N +G+P+D
Sbjct: 59  --TLGMALNLEEDNIGCVILGSYLHIKEGDVVKRTGRIASVPVGEALIGRVVNPVGEPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    I       + R  V+   +TGI+ +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTDRFRPIEKIAHGVVFRSPVDTPLQTGIKAVDAMIPIGRGQRELIMGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V   I+    +     ++VVVA + +   L 
Sbjct: 176 TAIAVDTIINQKGQDCICIYVAIGQKASTVANVIQKLHEEGAMDHTIVVVAGASDPSPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL++ D +++ A + RE++      P    YP  VF+   
Sbjct: 236 YIAPFAGAAMGEEFMEAGKDVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFNLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++TA+  +     + +  I  +V SI DG I+L   L   G  P
Sbjct: 296 RLLERAAKLHPNIGGGSMTALPVIETQQGDVSAYIPTNVISITDGQIILEPDLFYAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+  KA     +++   L   + ++ E   +     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGKAQRTAMRQVAGQLRLDLAQYRE---LAAFAQFGSDLDRATRARLTR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ   + 
Sbjct: 413 GERMVELLKQGQYNP 427


>gi|309803128|ref|ZP_07697225.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 11V1-d]
 gi|309809958|ref|ZP_07703806.1| ATP synthase F1, alpha subunit [Lactobacillus iners SPIN 2503V10-D]
 gi|315653740|ref|ZP_07906660.1| ATP synthase F1 sector alpha subunit [Lactobacillus iners ATCC
           55195]
 gi|325911714|ref|ZP_08174121.1| ATP synthase F1, alpha subunit [Lactobacillus iners UPII 143-D]
 gi|325912973|ref|ZP_08175346.1| ATP synthase F1, alpha subunit [Lactobacillus iners UPII 60-B]
 gi|308164636|gb|EFO66886.1| ATP synthase F1, alpha subunit [Lactobacillus iners LactinV 11V1-d]
 gi|308169746|gb|EFO71791.1| ATP synthase F1, alpha subunit [Lactobacillus iners SPIN 2503V10-D]
 gi|315489102|gb|EFU78744.1| ATP synthase F1 sector alpha subunit [Lactobacillus iners ATCC
           55195]
 gi|325476480|gb|EGC79639.1| ATP synthase F1, alpha subunit [Lactobacillus iners UPII 143-D]
 gi|325477653|gb|EGC80792.1| ATP synthase F1, alpha subunit [Lactobacillus iners UPII 60-B]
          Length = 503

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 111/431 (25%), Positives = 179/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+YS+ L V + G ++ +         L   +   + +     +    G    
Sbjct: 10  ALIKQQLENYSEKLNVDEVGTVTYVGDGIARAHGLDNVLS-SELLEFSNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   G+   +       GRV+N LG+P+DG   + K  
Sbjct: 66  LEANDVGIIILGKFDDIREGDQVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGEI-KTT 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+ L      
Sbjct: 125 KTRPIESKAPGVMERQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALAIDTII 184

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V+  ++       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQNVICIYVAIGQKESTVKNSVQTLKRFGAMDYTIVVQAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A S REI+      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVSYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 SKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLESDLFFAGTRPAVNAGESVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQATQAKLNRGRRTVEVLK 421

Query: 419 QSPSD-LSSED 428
           Q     L  ED
Sbjct: 422 QPLHKTLPVED 432


>gi|154249024|ref|YP_001409849.1| F0F1 ATP synthase subunit alpha [Fervidobacterium nodosum Rt17-B1]
 gi|171769322|sp|A7HJV9|ATPA_FERNB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|154152960|gb|ABS60192.1| ATP synthase F1, alpha subunit [Fervidobacterium nodosum Rt17-B1]
          Length = 507

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 103/430 (23%), Positives = 179/430 (41%), Gaps = 15/430 (3%)

Query: 7   TLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            L     DY + + ++  G +  +      V  L+  V   + V      +   G    +
Sbjct: 11  VLETKISDYKEEIRLEDTGKVIQVGDGIARVYGLN-NVMANEMVEFVETGTK--GLAFNL 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             D V I  +G  ++I  G  V    R   +       GRV+N LG+P+DG   +   + 
Sbjct: 68  EEDNVGIIILGDYKDIKEGHTVRRLNRIMEVPVGEGLLGRVVNPLGEPLDGLGPVEYKE- 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  I  K P  + R+ V+   +TG++V+D   P+  GQR  +      GK+ +      +
Sbjct: 127 TRPIEFKAPGVIFRKPVDTPLQTGLKVVDSLIPIGRGQRELIIGDRQTGKTAIAIDTIIN 186

Query: 185 DCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTI 241
                   I   +G++   V   +E          + VVVA S +   L+ +AP     +
Sbjct: 187 QKGKGVYCIYVAIGQKASAVARIVEKLRQTGAMEYTTVVVAASSDPATLQYIAPYAGCAM 246

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF   G + L++ D +++ A + R+I+      P    YP  VF    RLLER     
Sbjct: 247 GEYFMFNGKDALVVYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERAARLN 306

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           ++   G++TA+  +    ++ +  I  +V SI DG I L   L   G+ P V+   SVSR
Sbjct: 307 EKYGGGSLTALPIIETQANDISAYIPTNVISITDGQIYLEPGLFYAGQRPAVNIGLSVSR 366

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  SL   + +F+E         +   +D      + +   + + +KQ
Sbjct: 367 VGGAAQIKAMKQVAGSLKLDLAQFQELETFAQ---FATELDPATQAQITRGQRLMELMKQ 423

Query: 420 SP-SDLSSED 428
              S +  ED
Sbjct: 424 PQYSPMEVED 433


>gi|34539203|gb|AAQ74485.1| F1-ATPase alpha subunit [Asphodelus aestivus]
          Length = 410

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 169/405 (41%), Gaps = 23/405 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPVGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 397


>gi|83647778|ref|YP_436213.1| type III secretion system ATPase [Hahella chejuensis KCTC 2396]
 gi|83635821|gb|ABC31788.1| putative Yops secretion ATP synthase YscN [Hahella chejuensis KCTC
           2396]
          Length = 439

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 157/418 (37%), Positives = 236/418 (56%), Gaps = 11/418 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++++      +  +     +G+    +   +  L  +V+        + P+G    IS
Sbjct: 25  GRVTNVVGTI--IRAIVPGAQIGELCYLESAGAPRLLAEVVGFQEKEALLTPMGDMLGIS 82

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQR 140
               V   G    I+      GRV++ +G P+DG ++    DL    + +  P  M R+ 
Sbjct: 83  TATEVITTGQSHHIAVGPHLLGRVLDGMGAPMDGKNADFPSDLQHYPVYADAPSPMMRRM 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + +    G+R +D       GQR+GVFA +G GKSTLLSM       D ++I+L+GERGR
Sbjct: 143 ISEPLSLGVRALDGLLTCGEGQRMGVFAAAGGGKSTLLSMLVMGADVDVIVIALIGERGR 202

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE  LG + L +SV+V++TSD   + R  A   A TIAEYF  +G  VLL++DS+
Sbjct: 203 EVREFIEHNLGPEGLARSVLVISTSDRPSMERAKAAYVATTIAEYFRDQGQKVLLLMDSV 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RG+P SVF+ LP+LLER+G ++K  G+ITA+ +VLV+GD+
Sbjct: 263 TRFARAQREIGLAAGEPPTRRGFPPSVFATLPKLLERVGFNDK--GSITALYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++PIAD VRSILDGHIVL+R LA    YP +D LAS SR+     S + ++    +  L
Sbjct: 321 MSEPIADEVRSILDGHIVLSRKLAATNHYPAIDVLASTSRVMTAITSPEHRQAAGKMREL 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           + ++ +   +  IG Y+ G D + D+A+ ++  I  FLKQ+  +      FQ     L
Sbjct: 381 MAKYVDVELLVKIGEYQRGSDPVADEAIAKIDRIRGFLKQATDEKCD---FQTTLNAL 435


>gi|161484948|ref|NP_712960.2| F0F1 ATP synthase subunit alpha [Leptospira interrogans serovar Lai
           str. 56601]
 gi|161621777|ref|YP_001210.2| F0F1 ATP synthase subunit alpha [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|306526202|sp|Q72SY1|ATPA_LEPIC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|306526203|sp|Q8F2J2|ATPA_LEPIN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|293386029|gb|AAN49978.2| F0F1 ATP synthase subunit alpha [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 503

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 112/437 (25%), Positives = 181/437 (41%), Gaps = 17/437 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   +Y K+L V + G +  I      V  L + V  G+ V  Q       GQ   
Sbjct: 10  SVLKQEILNYKKDLGVEEVGTVLEIGDGIARVFGL-KNVMSGEMVEFQNG---IFGQAFN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +   G   +I  G  V    R   +       GRV+N LG+PIDG   +    
Sbjct: 66  LEDNSVGVVVYGNYLDIQEGFSVKRTNRILEVPVGPELLGRVVNPLGEPIDGKGPIN-AK 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
           L+  + S  P    RQ V +  +TGI+ ID   P+  GQR  +    G GK+   L ++ 
Sbjct: 125 LTRPVESPAPGIAMRQPVGEPMQTGIKAIDAMIPIGRGQRELIIGDRGTGKTSIALDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V   +E        + ++VV AT+ +   L+ +AP +  +
Sbjct: 185 NQKGTGVICVYVAIGQKASTVASTVEMLRNKGALEYTIVVSATAADPAPLQYIAPYSGCS 244

Query: 241 IAEYFSSKGDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF         ++ D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 MAEYFMYNEKKATLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            + + G  ++TA+  +       +  I  +V SI DG I L  +L   G  P VD   SV
Sbjct: 305 LDDKYGAGSLTALPIIETQEGEVSAYIPTNVISITDGQIYLQSNLFASGNRPAVDVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++   +   + +F   RD+         +D      + +   I   L
Sbjct: 365 SRVGSAAQIKAMKQVAGKMKLELAQF---RDLEAFAQLGTELDPATQAQLDRGNRIVQML 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQ   S    E+   EI
Sbjct: 422 KQPVSSPYPVEEQVVEI 438


>gi|163801848|ref|ZP_02195745.1| flagellum-specific ATP synthase [Vibrio sp. AND4]
 gi|159174356|gb|EDP59160.1| flagellum-specific ATP synthase [Vibrio sp. AND4]
          Length = 439

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 149/439 (33%), Positives = 236/439 (53%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E L     +      V  G +  +  +    T       +G   + +  +     
Sbjct: 1   MLALAERLKNYKVEGLTTRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMSGHMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGDNLFLMPSEQITGILPGARVTPLTSEVGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEHRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +T+AEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGGEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDSAFTLKPKLDEYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   +    D+   + K +
Sbjct: 418 QRMKESVPYDMCVNMLKSI 436


>gi|169303160|gb|ACA53177.1| ATP synthase alpha subunit [Aglaothamnion roseum]
          Length = 404

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 168/404 (41%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L + V  G+ +         +G  + +  D V +  +G G 
Sbjct: 7   VANVGTVLQVGDGIARVYGLDE-VMAGELLQFD-DEEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            IS G  V   G+  +I     + GR+++ L +PID    + + D +  I S  P  + R
Sbjct: 65  NISEGSSVQSTGKIAQIPVGEEFLGRIVDPLAQPIDAKG-IPQCDETRLIESSAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +         + +++V A +D    L+ +AP T   +AEYF  +G   L+I
Sbjct: 184 QKASSVAQIVSVLEEKGALEYTIIVAANADNPATLQYIAPYTGAALAEYFMYRGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|55824790|gb|AAV66477.1| F1-ATPase alpha subunit [Strychnos spinosa]
          Length = 424

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSETAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D  ++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDFSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPIIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQFKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  +    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGNSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|256842842|ref|ZP_05548330.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256848794|ref|ZP_05554228.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus MV-1A-US]
 gi|256614262|gb|EEU19463.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256714333|gb|EEU29320.1| F0F1 ATP synthase subunit alpha [Lactobacillus crispatus MV-1A-US]
          Length = 503

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDISEVGVVTYVGDGIARAHGLNDVLS-GELLKFDNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            S  I +K P  M+RQ V++  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KSRPIEAKAPGVMDRQSVDQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   VG++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAVGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGRDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 NDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|73748401|ref|YP_307640.1| F0F1 ATP synthase subunit alpha [Dehalococcoides sp. CBDB1]
 gi|147669181|ref|YP_001213999.1| F0F1 ATP synthase subunit alpha [Dehalococcoides sp. BAV1]
 gi|115312245|sp|Q3ZZT9|ATPA_DEHSC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081297|sp|A5FRQ3|ATPA_DEHSB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|73660117|emb|CAI82724.1| ATP synthase F1, alpha subunit [Dehalococcoides sp. CBDB1]
 gi|146270129|gb|ABQ17121.1| ATP synthase F1 subcomplex alpha subunit [Dehalococcoides sp. BAV1]
          Length = 503

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 95/430 (22%), Positives = 175/430 (40%), Gaps = 14/430 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q  +  + +  +++   + +   G +  +      +  LS      + +   G     LG
Sbjct: 6   QDIVSIIKEQIKEFGAPVSMTSVGSVIEVGDGIARIHGLS-NAKYNELLEFPGG---VLG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V    +G    I  GD V   GR   I+      GRV++ LG+P+DG   +
Sbjct: 62  IALNLEEDSVAAVILGEDSNIKEGDEVKATGRISEITVGKGMIGRVVDPLGRPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K + +  +    P  ++R+ V    +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 -KAESTRPLERIAPNVVDRKSVNTPVQTGIKAIDAMIPIGRGQRELIIGDRSTGKTAIAL 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
               +        I   +G++  +V   +         + ++VV A S ++  L+ +AP 
Sbjct: 181 DTIINQKGGDLVCIYVAIGQKASKVARIVALLEQYGAMEHTIVVAANSSDAVALQYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               I E F  +G + L++ D +T+ A + R+++      P    YP  +F    RLLER
Sbjct: 241 AGCAIGEEFMEQGKDALVVYDDLTKHAWAYRQLSLLLRRPPGREAYPGDLFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +     + +  +  +V SI DG I L   +   G  P V+  
Sbjct: 301 AARLNDKLGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIYLEPDMFNAGIRPAVNVG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK+   L   + ++ E       G     +D      + +   + 
Sbjct: 361 ISVSRVGSSAQTKAMKKVAGKLKMDMGQYRELAAFAQFG--TSELDKSTRMQLERGQRVT 418

Query: 415 DFLKQSPSDL 424
           + LKQ     
Sbjct: 419 EVLKQGQYQP 428


>gi|297539945|ref|YP_003675714.1| ATP synthase F1 subunit alpha [Methylotenera sp. 301]
 gi|297259292|gb|ADI31137.1| ATP synthase F1, alpha subunit [Methylotenera sp. 301]
          Length = 513

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   +++L +   +N          G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLSTSEISELIKSRLENFSTSAEARTQGTVISVTDGIVRIHGLS-NVMAGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD+    GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGDYEHITEGDICKCTGRILEVPVGPELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    ++ +I    P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKMTDKIEKVAPGVIARKSVSQPVQTGLKSVDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   V   +     +     ++VV AT+ +S  L+
Sbjct: 176 TAVAIDAIINQKGQNMTCIYVAIGQKASTVANVVRKLEENGALAYTIVVAATASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGEDALIVYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEDYVEKFTNGAVKGKTGSLTALPVIETAAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +  +  + +KQ+     S
Sbjct: 413 LDEATRKQLDRGRMFTELMKQAQYAPLS 440


>gi|89112862|gb|ABD61043.1| ATPase alpha subunit [Vitis sp. Qiu 94046]
          Length = 431

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------F 187
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKLLNSKATSDSET 176

Query: 188 DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVSKQPQ 410


>gi|89112880|gb|ABD61052.1| ATPase alpha subunit [Oxalis sp. Qiu 94028]
          Length = 410

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L + +  G+ V      S   G  + +  + V I   G   
Sbjct: 3   VDEIGRVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 58

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 59  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 118 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 177

Query: 189 -KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 178 LYCVYVAIGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 237

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 238 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A
Sbjct: 298 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAA 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                K++  S    + ++ E   +  +  +   +D      +++   + +  KQ 
Sbjct: 358 QLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQP 410


>gi|45600362|gb|AAS69847.1| ATP synthase alpha chain [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 507

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 112/437 (25%), Positives = 181/437 (41%), Gaps = 17/437 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   +Y K+L V + G +  I      V  L + V  G+ V  Q       GQ   
Sbjct: 14  SVLKQEILNYKKDLGVEEVGTVLEIGDGIARVFGL-KNVMSGEMVEFQNG---IFGQAFN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +   G   +I  G  V    R   +       GRV+N LG+PIDG   +    
Sbjct: 70  LEDNSVGVVVYGNYLDIQEGFSVKRTNRILEVPVGPELLGRVVNPLGEPIDGKGPIN-AK 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
           L+  + S  P    RQ V +  +TGI+ ID   P+  GQR  +    G GK+   L ++ 
Sbjct: 129 LTRPVESPAPGIAMRQPVGEPMQTGIKAIDAMIPIGRGQRELIIGDRGTGKTSIALDTIL 188

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V   +E        + ++VV AT+ +   L+ +AP +  +
Sbjct: 189 NQKGTGVICVYVAIGQKASTVASTVEMLRNKGALEYTIVVSATAADPAPLQYIAPYSGCS 248

Query: 241 IAEYFSSKGDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF         ++ D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 249 MAEYFMYNEKKATLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 308

Query: 300 SEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            + + G  ++TA+  +       +  I  +V SI DG I L  +L   G  P VD   SV
Sbjct: 309 LDDKYGAGSLTALPIIETQEGEVSAYIPTNVISITDGQIYLQSNLFASGNRPAVDVGISV 368

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++   +   + +F   RD+         +D      + +   I   L
Sbjct: 369 SRVGSAAQIKAMKQVAGKMKLELAQF---RDLEAFAQLGTELDPATQAQLDRGNRIVQML 425

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQ   S    E+   EI
Sbjct: 426 KQPVSSPYPVEEQVVEI 442


>gi|114535|sp|P08428|ATPA_XENLA RecName: Full=ATP synthase subunit alpha, mitochondrial; Flags:
           Precursor
 gi|213948|gb|AAA49646.1| mitochondrial ATPase, alpha subunit [Xenopus laevis]
          Length = 545

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/413 (23%), Positives = 175/413 (42%), Gaps = 29/413 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +  +   + I
Sbjct: 71  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVGLANDKLI 126

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 127 KEGDIVKRTGAIVDVPVGDELLGRVVDALGNTIDGKGPIG-SKTRRRVGLKAPGIIPRIS 185

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 186 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 245

Query: 191 IISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I   +G++             D +K ++VV  T+ ++  L+ +AP +  ++ EYF   G 
Sbjct: 246 IYVAIGQKRLTDA--------DAMKYTIVVSRTASDAAPLQYLAPYSGCSMGEYFRDNGT 297

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    YP  VF    RLLER          G++T
Sbjct: 298 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSLT 357

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A +  
Sbjct: 358 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRA 417

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 418 MKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 467


>gi|328468945|gb|EGF39905.1| type III secretion system ATPase [Vibrio parahaemolyticus 10329]
          Length = 440

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 156/433 (36%), Positives = 233/433 (53%), Gaps = 12/433 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 11  QQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G++++ LG+P DG  S        
Sbjct: 69  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGKILDGLGRPFDGAQSQEPS-AWY 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 128 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAD 187

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   D + +SV+VVATSD   + R  A   A +IAEYF
Sbjct: 188 VDVTVLALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERSKAAFVATSIAEYF 247

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 248 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 306 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             + +   + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + S
Sbjct: 366 EPNHQASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRTFLRQGTHEPS 425

Query: 426 SEDVFQEITKKLQ 438
                +    +L+
Sbjct: 426 D---LEGAIAQLK 435


>gi|153869491|ref|ZP_01999078.1| ATP synthase F1, alpha subunit [Beggiatoa sp. PS]
 gi|152074014|gb|EDN70918.1| ATP synthase F1, alpha subunit [Beggiatoa sp. PS]
          Length = 514

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 107/444 (24%), Positives = 187/444 (42%), Gaps = 31/444 (6%)

Query: 1   MQK-NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           MQ  N   +++L +   KN          G I S+T     +  LS  V  G+ +   G 
Sbjct: 1   MQPLNPSEISELIKLRIKNYNLETESRSEGTIVSLTDGIVRIHGLSDAV-QGEMLEFPGG 59

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
           +    G  + +  D V    +G  E IS GD +   GR   +       GRVIN LG+PI
Sbjct: 60  S---FGMALNLERDSVGAVVLGPYEHISEGDKIKCTGRILEVPVGPELMGRVINPLGQPI 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +      + I    P  + RQ V +  +TG++ ID   P+  GQR  +      G
Sbjct: 117 DGKGPI-ATQQKLPIERIAPGVIARQSVNQPVQTGLKAIDSMVPIGRGQRELIIGDRQTG 175

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPIL 230
           K+ +   ++  +     K I   +G++   V   +         + +++V A + ++  L
Sbjct: 176 KTAVALDAIINQKGTGIKCIYVAIGQKASSVANVVRKLEEHGAMEHTIIVAANASDAAAL 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   + EYF  +G++ L+I D +T+ A + R+++      P    YP  VF   
Sbjct: 236 QFIAPYSGCAMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            RLLER              G  + + G++TA+  +     + +  +  +V SI DG I 
Sbjct: 296 SRLLERASRINAEQVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIF 355

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L      P ++   SVSR+   A +   KKL   +   + ++ E   +     +  
Sbjct: 356 LETDLFNSNIRPAINAGLSVSRVGGAAQTKIIKKLGGGVRLDLAQYRE---LAAFAQFAS 412

Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421
            +D    K + +   + + +KQ  
Sbjct: 413 DLDENTRKQIERGQRVTEIMKQKQ 436


>gi|83591865|ref|YP_425617.1| flagellum-specific ATP synthase [Rhodospirillum rubrum ATCC 11170]
 gi|83574779|gb|ABC21330.1| ATPase FliI/YscN [Rhodospirillum rubrum ATCC 11170]
          Length = 475

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 168/422 (39%), Positives = 252/422 (59%), Gaps = 4/422 (0%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVI 63
              + L  D +K    +  G +  +  +   +      + +GD   V          +VI
Sbjct: 3   AIFSNLLNDLAKLPERRIFGRVVGVQGMLVEIGGAQTNLSVGDRCAVIARDGRPITCEVI 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                   + P  + + + LG       G   I P+  W GRVINA+G+ +DG  +L  G
Sbjct: 63  GFRAARALLMPFSVLDGVGLGCRAEVIEGVPAIYPTRDWLGRVINAMGEAVDGKGALPAG 122

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           + ++ I  + P A +RQRV      G+R I+ F   C GQR+G+FAGSG+GKS+++SMF 
Sbjct: 123 ERAVAIRGRPPSAHSRQRVGGKLDLGVRAINTFLTCCRGQRMGIFAGSGVGKSSVMSMFI 182

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D +++ LVGERGRE REFI +D   + LK++V VVATSDESP++R+ A    + +
Sbjct: 183 RNTNADVIVMGLVGERGREAREFIEDDLGEEGLKRAVTVVATSDESPLMRRQAAYMTLAV 242

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL ++DS+TRFA + REI+ ++GE P ++GY  +VF+ELP+LLER GP  
Sbjct: 243 AEYFRDQGLDVLCLMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPKLLERAGPGV 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + +VLV+GD+HN+PI+D+VR ILDGHIVL+R++AE GRYP ++ L SVSR  
Sbjct: 303 EGSGSITGLFTVLVEGDDHNEPISDAVRGILDGHIVLDRAIAERGRYPAINILRSVSRTM 362

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S  E  LV+    L+  +E   ++  +G YR G D   D A+H  P +  FL Q+ 
Sbjct: 363 PGCNSPAENALVAKGRRLMAAYENMAELIRLGAYRKGSDPETDTAIHYHPALDAFLTQAK 422

Query: 422 SD 423
           ++
Sbjct: 423 TE 424


>gi|238025751|ref|YP_002909982.1| F0F1 ATP synthase subunit alpha [Burkholderia glumae BGR1]
 gi|237874945|gb|ACR27278.1| ATP synthase subunit A [Burkholderia glumae BGR1]
          Length = 513

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 105/446 (23%), Positives = 181/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    IS GD+V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGDYGHISEGDIVKTTGRILEVPVGPELIGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I    P  + R  V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKATDAIEKIAPGVIWRHGVSQPVQTGVKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDTIINQKGKDLICIYVAIGQKASSIMNVVRKLEETGAMEYTIVVSASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTNVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDAATRKQLERGRRVTELLKQPQYQP 438


>gi|260102578|ref|ZP_05752815.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
 gi|260083605|gb|EEW67725.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
 gi|323466859|gb|ADX70546.1| Proton-translocating ATPase alpha subunit [Lactobacillus helveticus
           H10]
          Length = 506

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 178/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +  G+ +     +    G    
Sbjct: 13  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLNNALA-GELLKFDNGS---YGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LDSSDVGIIILGQFDNIREGDRVQRTGRIMSVPVGDALIGRVVNPLGQPVDGLGEI-KSD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 128 KTRPIEEKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + +     I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 188 NQKNQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 308 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 368 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 424

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 425 QPLHDP 430


>gi|188588315|ref|YP_001920205.1| flagellar protein export ATPase FliI [Clostridium botulinum E3 str.
           Alaska E43]
 gi|251778789|ref|ZP_04821709.1| flagellar protein export ATPase FliI [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|188498596|gb|ACD51732.1| flagellar protein export ATPase FliI [Clostridium botulinum E3 str.
           Alaska E43]
 gi|243083104|gb|EES48994.1| flagellar protein export ATPase FliI [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 435

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 163/412 (39%), Positives = 239/412 (58%), Gaps = 9/412 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIRINLDIVYICPVGIG 78
           +   G ++ +  +   V  +  +V  G+  +    K+     +V+      V + P+   
Sbjct: 19  IYTEGVVNKVIGLTVEVKGIKAFV--GELCIIYNEKDIPINCEVVGFKDGFVVLMPLDEL 76

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             IS G  V        +  S    G +I+ LGKP+ G++ +   D    + +  P  + 
Sbjct: 77  IGISPGCRVVPMRKPLSVRCSDKLLGEIIDGLGKPLRGEELVEGED--YPLENNPPDPLK 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+R+++   TGIR ID F     GQRIG+FAGSG+GKST L M AR    D  +I+L+GE
Sbjct: 135 RKRIKEIMPTGIRAIDGFLTCGDGQRIGIFAGSGVGKSTTLGMIAREAKADVNVIALIGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EFI +D   + +KKSVVV ATSD+  ++R    LTA  IAEYF  KG  V+L++
Sbjct: 195 RGREVLEFIEKDLGPEGMKKSVVVCATSDKPALIRLKGALTATAIAEYFRDKGKKVILMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+    GE P  +GY  SVF++LP+L+ER G SE   G+ITA  +VLVD
Sbjct: 255 DSVTRFAMAQREVGLAIGEPPATKGYTPSVFAKLPKLMERSGTSED--GSITAFYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PIAD+VR ILDGHIVL+RSLA +  YP +D L SVSRL +     +  +  S  
Sbjct: 313 GDDFNEPIADAVRGILDGHIVLSRSLAHKNHYPAIDILNSVSRLMNSIAPPEHIQAASIA 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             L+  ++E+ D+  IG Y  G +  +D A+     I +FL+Q+ ++ S+ +
Sbjct: 373 RDLLATYKESEDLINIGAYVKGSNKKIDLAISYHDKIEEFLRQTVNEKSNFE 424


>gi|329115838|ref|ZP_08244555.1| ATP synthase F1, alpha subunit [Streptococcus parauberis NCFD 2020]
 gi|326906243|gb|EGE53157.1| ATP synthase F1, alpha subunit [Streptococcus parauberis NCFD 2020]
          Length = 501

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 177/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSSIREGDIVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ATTGFR-PVETPAPGVMQRKSVFEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        +   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICVYVAIGQKESTVRTQVETLRKYGALDYTIVVTASAAQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|229513781|ref|ZP_04403243.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TMA 21]
 gi|229348962|gb|EEO13919.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TMA 21]
          Length = 439

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 235/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + L Q   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLTQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSDQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAMPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|159106785|ref|YP_001531205.1| ATP synthase CF1 alpha subunit [Cuscuta obtusiflora]
 gi|190358168|sp|A8W3H5|ATPA_CUSOB RecName: Full=ATP synthase subunit alpha, plastid; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|158142509|gb|ABW20550.1| ATP synthase CF1 alpha subunit [Cuscuta obtusiflora]
          Length = 507

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 182/422 (43%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y+K + ++  G +  +      +  L + V  G+ +  +       G  + + 
Sbjct: 13  IRERIQHYTKKINILNTGTVLQVGDGIVRIYGLDE-VMAGELIEFEEGTK---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V +  +G G  I  G  V   GR  ++     + GRVINAL  PIDG   +   +  
Sbjct: 69  SKNVGVVLMGDGLRIKEGGSVKATGRIAQVPVGDAYLGRVINALATPIDGRGEILSSEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ + +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IDSPAPGILSRRSIYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +         + ++VV   +D +  L+ +AP T   +A
Sbjct: 188 QSQNIICVYVAIGQKASSVAQVVTTLQEKGALQYTIVVAEMADSAATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  K  + L+I D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYKERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 KLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGLRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++ S L   + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVASKLKLELAQFAELE---AFAQFASDLDQASQNLLARGQRLRELLKQS 424

Query: 421 PS 422
            S
Sbjct: 425 QS 426


>gi|312865266|ref|ZP_07725494.1| ATP synthase F1, alpha subunit [Streptococcus downei F0415]
 gi|311099377|gb|EFQ57593.1| ATP synthase F1, alpha subunit [Streptococcus downei F0415]
          Length = 501

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L      G+ +  Q       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGL-DNAMAGELLEFQNG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G   EI+ GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSEITEGDTVKRTGKIMEVPVGPELVGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
                +  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+   +
Sbjct: 122 QTSK-TRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAI 180

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKDQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLVYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAQVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDEATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSED 428
           + LKQ        +
Sbjct: 418 EVLKQPVHQPLPVE 431


>gi|124265388|ref|YP_001019392.1| F0F1 ATP synthase subunit alpha [Methylibium petroleiphilum PM1]
 gi|158512856|sp|A2SC68|ATPA_METPP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124258163|gb|ABM93157.1| Sodium-transporting two-sector ATPase [Methylibium petroleiphilum
           PM1]
          Length = 517

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 102/448 (22%), Positives = 187/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     V  LS+ V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLGASSDIRNQGTVVSVTDGIVRVHGLSE-VMAGEMLEFPATK 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
                 G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPTFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARKSVDQPVQTGLKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIINQKGQNMTCVYVAIGQKASSIKNVVRSLEAAGAMSYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L+I D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETNLFNAGIRPAINAGISVSRVGGAAQTKLVKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             +D    K + +   + + LKQ     
Sbjct: 416 SDLDDATRKQLDRGARVTELLKQQQYQP 443


>gi|297569853|ref|YP_003691197.1| ATP synthase F1, alpha subunit [Desulfurivibrio alkaliphilus AHT2]
 gi|296925768|gb|ADH86578.1| ATP synthase F1, alpha subunit [Desulfurivibrio alkaliphilus AHT2]
          Length = 507

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/435 (22%), Positives = 183/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ +   +       + + G + S+      V  +   + + + +   G  
Sbjct: 1   MQIKAEEISQIIKGQIQEYEAKVDLSETGTVLSVGDGIARVYGVENCMAM-ELLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            + LG  + +  D V    +G   EI  GD+V   GR   +       GRV++ +G PID
Sbjct: 58  -NILGVALNLEQDNVGCAVLGDVREIKEGDIVKRTGRIAEVPVGPEMLGRVVDGVGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + + +I    P  + R+ V +   TG + +D  TP+  GQR  V     IGK
Sbjct: 117 GQGPITAKE-NRKIEMLAPGVIARKSVHEPCYTGSKAVDAMTPVGRGQRELVIGDRQIGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +   + ++ A+ +     I   +G++   V   +E          + VV A + +   ++
Sbjct: 176 TALCVDAILAQKETDMHCIYVAIGQKKSTVALVVEALRKHGAMEYTTVVAACASDPAPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++      + EYF   G + L+I D +++ A + RE++      P    +P  +F    
Sbjct: 236 YISAFAGTAMGEYFRDNGKHALIIYDDLSKQAVAYRELSLLLRRPPGREAFPGDIFFNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERSAKLSDELGAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E   +    G+   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQVKAMKQVAGTLRLDLAQYRE---LAAFAGFGSDLDAATQAQLTR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GARLVEILKQPQYQP 427


>gi|238765109|ref|ZP_04626043.1| hypothetical protein ykris0001_18570 [Yersinia kristensenii ATCC
           33638]
 gi|238696661|gb|EEP89444.1| hypothetical protein ykris0001_18570 [Yersinia kristensenii ATCC
           33638]
          Length = 513

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|226326991|ref|ZP_03802509.1| hypothetical protein PROPEN_00851 [Proteus penneri ATCC 35198]
 gi|225204828|gb|EEG87182.1| hypothetical protein PROPEN_00851 [Proteus penneri ATCC 35198]
          Length = 513

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 192/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAV-EHDGFSPVEMIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAVDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALENTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K ++    + + LKQ   +  S
Sbjct: 413 LDDATRKQLNHGQKVTELLKQKQYEPMS 440


>gi|190575944|ref|YP_001973789.1| F0F1 ATP synthase subunit alpha [Stenotrophomonas maltophilia
           K279a]
 gi|226739945|sp|B2FHZ0|ATPA_STRMK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190013866|emb|CAQ47504.1| putative ATP synthase alpha chain [Stenotrophomonas maltophilia
           K279a]
          Length = 515

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 98/440 (22%), Positives = 187/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L ++  + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISELIKNRIEKVKLAAESRNEGTVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYEHLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG  DL+  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 PLG-TDLTAPVERVAPGVIWRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   +   +     +     ++VV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTIANIVRKLEENGALAHTIVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYSGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTEGKVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|11466576|ref|NP_066466.1| ATP synthase F1 subunit alpha [Rhodomonas salina]
 gi|10444163|gb|AAG17737.1|AF288090_13 ATP synthase F1 subunit alpha [Rhodomonas salina]
          Length = 510

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 184/445 (41%), Gaps = 26/445 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  +   L  + E+  KN        + G++ S+      V  L + +  G+        
Sbjct: 1   MNFSAIELTAIIENRLKNYYTNVKIDETGFVLSVGDGIARVFGL-KGIQAGEMCRF--AQ 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           ++  G  + +  D V I   G   +I  GD V        +       GRV++ LG PID
Sbjct: 58  ANIFGMALNLEQDNVGIVIFGNDRKIKEGDTVERSNFIVEVPVGRELLGRVVDGLGMPID 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K +    +  K P  + R+ V +  +TG++V+D   P+  GQR  +      GK
Sbjct: 118 GLGEI-KAEKKSRVEIKAPGIIPRKSVNEPMQTGLKVVDGLVPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +      +                I   VG++   V +  +     N    +++V AT
Sbjct: 177 TAVAIDTIINQKSIHESNDESNKLYCIYVAVGQKRSTVAQVSKILKSSNAMGYTIIVAAT 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S  L+ +AP T  TI E+F   G + L+I D +++ A + R+++      P    +P
Sbjct: 237 ASDSAPLQFLAPYTGCTIGEFFRDNGSHALVIYDDLSKQAVAYRQMSLLLRRPPGREAFP 296

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 297 GDVFYLHSRLLERAAKLNADFGSGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 356

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  +L   + ++ E   +     +   +D 
Sbjct: 357 LFFKGIRPALNVGLSVSRVGSAAQIKAIKQVAGTLKLELAQYRE---VAAFAQFGSDLDA 413

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
                +++   + + LKQ+     +
Sbjct: 414 ATQHLLNRGSKLTELLKQNQFSPLT 438


>gi|187479686|ref|YP_787711.1| F0F1 ATP synthase subunit alpha [Bordetella avium 197N]
 gi|114152645|sp|Q2KU34|ATPA_BORA1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115424273|emb|CAJ50826.1| ATP synthase alpha chain [Bordetella avium 197N]
          Length = 513

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 102/446 (22%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASTDVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +       GRV+N LG PID
Sbjct: 58  -NVFGLALNLERDSVGAVILGDYTGVSEGDQVKTTGRILEVPVGPELRGRVVNTLGLPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTKETDI-IEKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|228016613|gb|ACP51442.1| ATP synthase CF1 alpha subunit [Pinus albicaulis]
          Length = 507

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGXXXXSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|138894743|ref|YP_001125196.1| flagellum-specific ATP synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196247636|ref|ZP_03146338.1| flagellar protein export ATPase FliI [Geobacillus sp. G11MC16]
 gi|134266256|gb|ABO66451.1| Flagellar-specific ATP synthase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212420|gb|EDY07177.1| flagellar protein export ATPase FliI [Geobacillus sp. G11MC16]
          Length = 423

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 152/412 (36%), Positives = 233/412 (56%), Gaps = 9/412 (2%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYICPVG 76
           +  + G +S +  +            +GD   +H+      +  +V+  +   V + P  
Sbjct: 1   MYKRFGKVSRVIGLMT--ESKGPESSIGDLCYIHETSGGRKIPAEVVGFHEQHVLLMPFS 58

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               I+ G LV   G+   +       G V++ +G+P+DG  +L  G   + +    P  
Sbjct: 59  SMAHIAPGCLVEATGKPLEVYVGDALIGTVLDPIGRPLDGS-ALPLGLKPVSVERDPPNP 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  + +  + G+RVID    +  GQR+G+FAGSG+GKSTL+ M AR    D  +I+L+
Sbjct: 118 LARPPIAEPLEVGVRVIDSLLAVGKGQRVGIFAGSGVGKSTLMGMIARRTSADVNVIALI 177

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+  D   + L +SVVVVATSD+  ++R     TA  IAEYF  +G +V+L
Sbjct: 178 GERGREVREFLERDLGPEGLARSVVVVATSDQPALMRVKGAYTATAIAEYFRDQGADVML 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +    G ITA  +VL
Sbjct: 238 MMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERAGTNAS--GTITAFYTVL 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PIAD+VR ILDGH VL R LA +G+YP ++ L SVSR+     SA+ ++  +
Sbjct: 296 VDGDDMNEPIADAVRGILDGHFVLERQLANKGQYPAINVLKSVSRVMPHIISAEHREAAN 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +  L+  + ++ D+  IG Y+ G    +D+A+   P I  F +Q   + ++
Sbjct: 356 RVRRLLSTYIDSEDLIQIGAYKHGSSREIDEAIQFYPQIMAFCRQEIDEKTT 407


>gi|197286887|ref|YP_002152759.1| F0F1 ATP synthase subunit alpha [Proteus mirabilis HI4320]
 gi|227354880|ref|ZP_03839295.1| ATP synthase alpha chain [Proteus mirabilis ATCC 29906]
 gi|226739925|sp|B4F0E5|ATPA_PROMH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|194684374|emb|CAR46018.1| ATP synthase alpha chain [Proteus mirabilis HI4320]
 gi|227165033|gb|EEI49869.1| ATP synthase alpha chain [Proteus mirabilis ATCC 29906]
          Length = 513

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 191/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAV-EHDGFSPVEMIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAVDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALENTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSAEYVENFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K ++    + + LKQ   +  S
Sbjct: 413 LDDATRKQLNHGQKVTELLKQKQYEPMS 440


>gi|34539259|gb|AAQ74513.1| F1-ATPase alpha subunit [Clivia nobilis]
          Length = 402

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 93/394 (23%), Positives = 165/394 (41%), Gaps = 22/394 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 354

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               +   +D      +++   + + LKQ   + 
Sbjct: 355 AFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 388


>gi|34539345|gb|AAQ74556.1| F1-ATPase alpha subunit [Kniphofia uvaria]
          Length = 412

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/403 (23%), Positives = 169/403 (41%), Gaps = 23/403 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G++TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL  
Sbjct: 296 DVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSLKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 395


>gi|270292837|ref|ZP_06199048.1| ATP synthase F1, alpha subunit [Streptococcus sp. M143]
 gi|270278816|gb|EFA24662.1| ATP synthase F1, alpha subunit [Streptococcus sp. M143]
          Length = 501

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDNLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMERKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|270307925|ref|YP_003329983.1| ATP synthase F1, alpha subunit [Dehalococcoides sp. VS]
 gi|270153817|gb|ACZ61655.1| ATP synthase F1, alpha subunit [Dehalococcoides sp. VS]
          Length = 503

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/430 (22%), Positives = 176/430 (40%), Gaps = 14/430 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q  +  + +  +++   + +   G +  +      +  LS      + +   G     +G
Sbjct: 6   QDIVSIIKEQIKEFGAPVSMTSVGSVIEVGDGIARIHGLS-NAKYNELLEFPGG---VMG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V    +G    I  GD V   GR   I+      GRV++ LG+P+DG   +
Sbjct: 62  IALNLEEDSVAAVILGEDSNIKEGDEVKATGRISEITVGKGMIGRVVDPLGRPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K + +  +    P  ++R+ V    +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 -KAESTRPLERIAPNVVDRKSVNTPVQTGIKAIDAMIPIGRGQRELIIGDRSTGKTAIAL 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
               +        I   +G++  +V   +         + ++VV A S ++  L+ +AP 
Sbjct: 181 DTIINQKGGDLVCIYVAIGQKASKVARTVALLEQYGAMEHTIVVAANSSDAVALQYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               I E F  +G + L++ D +T+ A + R+++      P    YP  VF    RLLER
Sbjct: 241 AGCAIGEEFMEQGQDALVVYDDLTKHAWAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +     + +  +  +V SI DG I L   +   G  P V+  
Sbjct: 301 AARLNDKLGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIYLEPDMFNAGIRPAVNVG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK+ S L   + ++ E       G     +D      + +   I 
Sbjct: 361 ISVSRVGSSAQTKAMKKVASKLKMDMGQYRELAAFAQFG--TSELDKATRMQLERGQRIT 418

Query: 415 DFLKQSPSDL 424
           + LKQ     
Sbjct: 419 EVLKQGQYQP 428


>gi|34556936|ref|NP_906751.1| F0F1 ATP synthase subunit alpha [Wolinella succinogenes DSM 1740]
 gi|81707391|sp|Q7MA20|ATPA_WOLSU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|34482651|emb|CAE09651.1| ATP SYNTHASE F1 ALPHA SUBUNIT [Wolinella succinogenes]
          Length = 500

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/427 (22%), Positives = 177/427 (41%), Gaps = 19/427 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + ++ + ++   N      V + G + +       V  L   +   + V     +    G
Sbjct: 4   DEISSIIKERIDNFELDVNVAETGKVMAFADGVAKVYGLKNVMSY-EMVEFDTGDR---G 59

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
               +    V +  +G G+ I  G  V   G+    P      GRV+N +G+P+DG  ++
Sbjct: 60  LASNLEESSVGVVVLGAGKNIKEGTSVKRLGKLMKVPAGDALMGRVVNGMGEPVDGKGAI 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    +  K P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 120 ETTEYRF-VEEKAPGIMQRKSVHEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTVAI 178

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G++   V + +           +++V A + +S  ++ +AP 
Sbjct: 179 DTIINQKGQDVVCIYVAIGQKESTVAQVVRKLEEHGAMEYTIIVNAPASDSAAMQFLAPY 238

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T VT+ EYF     + L+I D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 239 TGVTMGEYFRDNARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYLHSRLLER 298

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +     +    I  +V SI DG I L   L   G  P ++  
Sbjct: 299 AAKVSDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIFLETDLFNSGVRPAINVG 358

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  +L   + ++ E +       +   +D    K + +   + 
Sbjct: 359 LSVSRVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFAQFASDLDESSRKQLERGQRMV 415

Query: 415 DFLKQSP 421
           + LKQ P
Sbjct: 416 EILKQPP 422


>gi|114562363|ref|YP_749876.1| flagellum-specific ATP synthase [Shewanella frigidimarina NCIMB
           400]
 gi|114333656|gb|ABI71038.1| flagellar protein export ATPase FliI [Shewanella frigidimarina
           NCIMB 400]
          Length = 446

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 148/410 (36%), Positives = 228/410 (55%), Gaps = 5/410 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V  G +  +  +    T       +G     +    + + +V+  +  ++Y+ P+     
Sbjct: 25  VASGQLVRVVGLTLEATG--CRAPVGSLCSIETMVGELVAEVVGFDDKLLYLMPIEELRG 82

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    ++      GRV++  G P+DG   L   D            ++R+
Sbjct: 83  VLPGARVKPLGEQSGLNVGLSLLGRVLDGSGVPLDGLGPLN-TDQHASRHGPYINPLSRR 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D +++ LVGERG
Sbjct: 142 AITEPLDVGVRAINSMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGSKADIIVVGLVGERG 201

Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV+EFIED LG +   +SVVV A +D SP++R  A  T+  IAEYF   G +VLL++DS
Sbjct: 202 REVKEFIEDILGKEGRARSVVVAAPADTSPLMRLRACETSTRIAEYFRDLGYDVLLLMDS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + RE+A   GE P  +GYP SVF++LPRL+ER G     +G+ITA  +VL +GD
Sbjct: 262 LTRYAQAQREVALAVGEPPATKGYPPSVFAKLPRLVERAGNGGAGQGSITAFYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  DPIAD+ R+ILDGHIVL+R LA+ G YP +D  AS+SR+A    S +  + +  +  
Sbjct: 322 DQQDPIADASRAILDGHIVLSRQLADSGHYPAIDVEASISRVAPMVISEEHLEAMRKVKQ 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +   +++ RD+  IG Y  G D  +D A+   P +  FL+Q   +  + +
Sbjct: 382 MYSLYQQNRDLISIGAYSQGSDPRIDNAIRLQPAMNAFLRQGFKEPMTFE 431


>gi|121282044|gb|ABM53598.1| putative ATP synthase alpha chain [uncultured bacterium CBNPD1 BAC
           clone 2089]
          Length = 530

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/424 (22%), Positives = 181/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+ +L  +  G ++ +      V+ L     + + +  +      +G  + 
Sbjct: 13  AAITKGLEGYTPDLSKRTVGRVAEVGDGIARVSGL-PDCAVNELLEFEDG---TVGLALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D +    +G  + I  G  V   GR   +       GRVINALG+PIDG   +    
Sbjct: 69  LDEDSIGAVVLGDADSIEEGQAVKATGRILSLPVGDALLGRVINALGQPIDGKGDIVGAT 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 129 IRR-VEVQAPGIMGRKPVHEPLQTGIKAIDAMIPIGRGQRELIIGDRKTGKTTVAIDTII 187

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +      K I   +G++G  V + +E        + +VVV A + +    + +AP     
Sbjct: 188 NQRGLGVKCIYVAIGQKGSTVAQTVETLRQAGALEYTVVVAAPASDPAPFKYLAPYAGCA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + +++    ++ L++ D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 248 LGQHWMENSEHALVVYDDLSKQAEAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               G  ++TA+  +     + +  I  +V SI DG + L  +L + G  P VD   SVS
Sbjct: 308 SDANGAGSLTALPVIETKAGDVSAYIPTNVISITDGQVYLQDNLFKSGVRPAVDVGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K +  +L   + +F E         +   +D +    + +   + + LK
Sbjct: 368 RVGSAAQIKAMKSVSGTLKLDLAQFRELE---AFATFGSELDAVSKAQLERGYRLVELLK 424

Query: 419 QSPS 422
           QS +
Sbjct: 425 QSLN 428


>gi|296111396|ref|YP_003621778.1| ATP synthase subunit A [Leuconostoc kimchii IMSNU 11154]
 gi|295832928|gb|ADG40809.1| ATP synthase subunit A [Leuconostoc kimchii IMSNU 11154]
          Length = 504

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +   L V + G ++ I       T L+     G+ +          G    
Sbjct: 10  ALIKQQLEKFDTTLTVEEVGTVTYIGDGVARATGLA-NAMAGELLEFANG---TFGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G  ++I  GD V   GR   +       GRV+N LG+PIDG   + K +
Sbjct: 66  LDSSEVGIIILGGFDDIREGDTVKRTGRIMEVPVGEQLIGRVVNTLGQPIDGLGEI-KTE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPVEVKAPGVMQRKSVFEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D    VI   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKDQNMIVIYVAIGQKDSTVRTQVETLRQLGAMDYTIVVNAGPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG + L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPFIETQAGDVSAYIPTNVISITDGQVFLDADQFYAGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLASFRELESFAQFG---SDLDAATQAKLARGRRTVEILK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|258514006|ref|YP_003190228.1| ATPase, FliI/YscN family [Desulfotomaculum acetoxidans DSM 771]
 gi|257777711|gb|ACV61605.1| ATPase, FliI/YscN family [Desulfotomaculum acetoxidans DSM 771]
          Length = 441

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 161/442 (36%), Positives = 245/442 (55%), Gaps = 10/442 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSD 57
           M + +   A+ +    K+ V V  G ++ +     TV  +     +G+    +  G++  
Sbjct: 3   MSEIIIDFARWSRRVRKSRVAVVSGEVTRVVG--LTVEVVGIKASIGEVCHVIVPGRSRP 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
            + +V+        + P+G  + I  G+ V   GR   +  S    G V++ LG+ I G 
Sbjct: 61  IVAEVVGFMQGASILMPLGELQGIQPGNQVVPTGRNLTVEVSDDMLGSVLDGLGRQIGGK 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            + G+      + ++ P  + RQR+ +   TG+R ID       GQRIG+FAGSG+GKST
Sbjct: 121 TA-GEQKTKFPVDNQPPNPLTRQRIAQVLPTGVRAIDSVLTCGQGQRIGIFAGSGVGKST 179

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAP 235
           LL M A+    D  +I L+GERGREV++FI  D   + L +SVVV ATSD+  ++R    
Sbjct: 180 LLGMIAKYGKADVNVIGLIGERGREVKDFIETDLGEEGLSRSVVVAATSDQPALIRLKGA 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + A  +AEYF +KG NV+L++DS+TRFA + RE+    GE P  +GY  SVF+ LP+LLE
Sbjct: 240 MVATALAEYFRNKGLNVMLLMDSVTRFAMAQREVGLAVGEPPATKGYTPSVFALLPKLLE 299

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G S   +G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL R LA +  YP +D L+
Sbjct: 300 RSGMS--VEGSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLTRRLAAKNHYPAIDVLS 357

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+     + +     + L  L+  + +  D+  IG Y  G +  +D A+     I +
Sbjct: 358 SVSRVMSDIVNPEHLSRAARLRELLSTYLQAEDLISIGAYNFGANPKIDDAIRHYDNIIE 417

Query: 416 FLKQSPSDLSSEDVFQEITKKL 437
           FL+Q P +        +  ++L
Sbjct: 418 FLRQHPEEPYEFSETIDWLRRL 439


>gi|167915639|ref|ZP_02502730.1| type III secretion system ATPase [Burkholderia pseudomallei 112]
          Length = 442

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 167/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHIVL+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIVLSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|239628989|ref|ZP_04672020.1| ATPase FliI/YscN [Clostridiales bacterium 1_7_47_FAA]
 gi|239519135|gb|EEQ59001.1| ATPase FliI/YscN [Clostridiales bacterium 1_7_47FAA]
          Length = 434

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 169/420 (40%), Positives = 246/420 (58%), Gaps = 9/420 (2%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIV 70
           E  + +L    G I  I     TV  +     LGD          +    +V+    + V
Sbjct: 9   EIQNADLYTYLGKIDKIVGT--TVESMGPACRLGDVCTIDVVEGTTPVRAEVVGFRENRV 66

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            + P    E I  G  V + G R RI+ S    GR ++A+G PIDG   +        I 
Sbjct: 67  LLMPYEEMEGIGYGSAVRNTGERLRIAVSNQLIGRTVDAMGMPIDGLGPVDDVSY-YPIT 125

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
            K    M R R++   + G++ ID    +  GQR+G+FAGSG+GKSTL+ M A++   D 
Sbjct: 126 GKPSNPMERPRIDTIIQMGVKAIDGLLTVGKGQRMGIFAGSGVGKSTLMGMIAKNVKADV 185

Query: 190 VIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +I+LVGER REV EFI  D   + LK+SV+VVATS +S ++R    +TA TIAEYF  +
Sbjct: 186 NVIALVGERSREVVEFINRDLGEEGLKRSVLVVATSSQSAMMRSKCTMTATTIAEYFKDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL++DS+TRFA + RE+  + GE PVARGY  S++SELP+LLER G  E+  G+IT
Sbjct: 246 GMDVLLMMDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLERSGNFEE--GSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + +VLV+GD+ N+PI+D+VR I+DGHI+L+R +A + RYP +D L+SVSRL +   + +
Sbjct: 304 GIYTVLVEGDDANEPISDTVRGIIDGHIMLSRKVAAKNRYPAIDILSSVSRLMNDIVTPE 363

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            K+    L  L+  +E   D+  IG Y+ G +  LD+A+ ++  IY FL+Q   +  S D
Sbjct: 364 HKEAAGKLRRLLAVYESNSDLVSIGAYKKGTNPELDEALERIDSIYGFLQQKTDESFSLD 423


>gi|163789647|ref|ZP_02184085.1| flagellum-specific ATP synthase [Carnobacterium sp. AT7]
 gi|159875179|gb|EDP69245.1| flagellum-specific ATP synthase [Carnobacterium sp. AT7]
          Length = 442

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 163/424 (38%), Positives = 241/424 (56%), Gaps = 9/424 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           K+  ++ G +S +T +   V  L  +V     ++ +      L +V+    + V + P+ 
Sbjct: 16  KSYYLKMGKVSQVTGLIIKVEGLDAFVGEVCEILIKSSGRVALSEVVGFVDETVLLMPLD 75

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E I  G LV   G+  ++  S    G  ++ LG+P+D   SL    +  ++    P  
Sbjct: 76  ELEGIGPGCLVKPTGKTLKVEISEKLLGNTLDGLGRPMD--TSLVVDGVFYDVNRSSPNP 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R++++    TGI+ ID    +  GQR+G+FAGSG+GKSTLL M AR    D ++I L+
Sbjct: 134 FKRKKIKDVMPTGIKAIDGTLTVGEGQRVGIFAGSGVGKSTLLGMMARYIEADIIVIGLI 193

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV EFI +D   +  +KSVVV ATSD  P++R      A TIAEYF  +G  V+L
Sbjct: 194 GERGREVLEFIEKDLGEEGYRKSVVVCATSDMPPLVRLKGASVATTIAEYFRDQGKKVVL 253

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G SE   G+ITA  +VL
Sbjct: 254 MMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFTTLPKLLERSGMSEN--GSITAFYTVL 311

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ N+PIADSVR ILDGHIVL+R +A E  YP +D   S+SRL     +    +   
Sbjct: 312 VEGDDMNEPIADSVRGILDGHIVLSRKIASENHYPAIDIQNSISRLMKDITAEKHSETAG 371

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L   +  + +++D+  +G YR G + ++D+AV     I DFLKQ   +      F E+ 
Sbjct: 372 KLKENMAIYSDSKDLIDVGAYRKGSNPLVDRAVQLNTPIKDFLKQRVDERY---AFDEVV 428

Query: 435 KKLQ 438
            +L+
Sbjct: 429 GQLK 432


>gi|134281964|ref|ZP_01768670.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
 gi|134246493|gb|EBA46581.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
          Length = 442

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 167/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHIVL+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIVLSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|83646016|ref|YP_434451.1| type III secretion system ATPase [Hahella chejuensis KCTC 2396]
 gi|83634059|gb|ABC30026.1| Flagellar biosynthesis/type III secretory pathway ATPase [Hahella
           chejuensis KCTC 2396]
          Length = 448

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 167/428 (39%), Positives = 235/428 (54%), Gaps = 10/428 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73
             +     G ++         +     V +G+    V        L +VI  +     + 
Sbjct: 25  QADFSQVRGRVTQAVGTIVKASV--NGVRIGEICELVDPESQRSILAEVIGFSRQEALLT 82

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+   E +S    V   GR   I  S    GRV++ LG PID  + L  G +   I+S  
Sbjct: 83  PLSEMEGLSAHTEVIPTGRSHEIQISEGILGRVLDGLGAPIDDGEPL-TGGVPYPIISAS 141

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  + R+ VE    TG+R ID       GQR+GVFA +G+GKSTLLSM  R    D V+I
Sbjct: 142 PNPLTRRLVETPMTTGVRAIDGMLTCGEGQRMGVFAAAGVGKSTLLSMITRHTDADIVVI 201

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGREVR FI  D   + ++++VVV ATSD   + R  A   A  IAE+F  +G  
Sbjct: 202 GLIGERGREVRGFIERDLGAEGMQRAVVVAATSDRPAMERVKAGYVATAIAEHFRDQGKR 261

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRFA ++REI   +GE P  RG+P +VF+ LP+LLER GP  K  G I+A+ 
Sbjct: 262 VLLLIDSVTRFARALREIGLAAGEPPARRGFPPTVFATLPKLLERAGPGAK--GAISALY 319

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+  +P+AD VRSILDGHIVL+R+LAE G +P VD LAS SRL +   + ++ +
Sbjct: 320 TVLVEGDDMTEPVADEVRSILDGHIVLSRALAESGHFPAVDILASSSRLMNDIATPEQLQ 379

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF 430
               L  L+ R++E   +  IG Y+PG D + D A+  +  I  FL+Q      S  D  
Sbjct: 380 QARRLRQLLARYKEIELLVRIGEYQPGTDPLADAAIKAIEPINQFLRQHDGAPCSMADTL 439

Query: 431 QEITKKLQ 438
            ++    Q
Sbjct: 440 AQLQSLAQ 447


>gi|27461573|gb|AAM95203.1| ATPase F1 alpha subunit [Anarthria prolifera]
          Length = 418

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 168/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKEV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 357 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 405


>gi|306829406|ref|ZP_07462596.1| ATP synthase F1 sector alpha subunit [Streptococcus mitis ATCC
           6249]
 gi|304428492|gb|EFM31582.1| ATP synthase F1 sector alpha subunit [Streptococcus mitis ATCC
           6249]
          Length = 501

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVSETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEGLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D S  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKSRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|253681702|ref|ZP_04862499.1| flagellar protein export ATPase FliI [Clostridium botulinum D str.
           1873]
 gi|253561414|gb|EES90866.1| flagellar protein export ATPase FliI [Clostridium botulinum D str.
           1873]
          Length = 439

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 10/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NL 59
           M+ +L+  +   +    +     G +  +  +   V  +  +V  G+      K +D  +
Sbjct: 1   MEISLDFHSIKEKISKCDFKYTEGIVKQVIGLTIEVEGIKAFV--GEVCTIYNKENDPIM 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D V + P+G    I  G  V        +  S    G+V+N LGK +  DD 
Sbjct: 59  CEVVGFKEDNVILMPLGELIGIGPGCRVIPSKNYLTVKCSDKLLGKVLNGLGKSLKQDDE 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    + +  P  + R+R++    TG+R ID F     GQR+G+FAGSG+GKST L
Sbjct: 119 QLYIGTEYPLDTAPPDPLKRRRIKDSIATGVRAIDGFLTCGEGQRVGIFAGSGVGKSTTL 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREV +FI +D   + LKKSV+V ATSD+  ++R     T
Sbjct: 179 GMIAREAKADVNVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFT 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  KG  V+L++DS+TRFA + RE+    GE P  +GY  SVF+ LPRL+ER 
Sbjct: 239 ATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERS 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G SEK  G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D L SV
Sbjct: 299 GMSEK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDVLNSV 356

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL ++    + KK  S    L+  ++ + D+  IG Y  G +  +D A+     I ++L
Sbjct: 357 SRLMNEIADDEHKKTASFARDLLATYKNSEDLINIGAYAQGSNSKVDMAIQYNDEINNYL 416

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q   + S    F E   KL
Sbjct: 417 RQGIKEHSE---FSESINKL 433


>gi|170017977|ref|YP_001728896.1| ATP synthase F1, alpha subunit [Leuconostoc citreum KM20]
 gi|226739906|sp|B1MW87|ATPA_LEUCK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169804834|gb|ACA83452.1| ATP synthase F1, alpha subunit [Leuconostoc citreum KM20]
          Length = 504

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +   L V + G ++ I       T L+     G+ +          G    
Sbjct: 10  ALIKQQLEKFDTTLTVEEVGTVTYIGDGVARATGLA-NAMAGELLEFANG---TFGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G  ++I  GD V   GR   +       GRV+NALG+PIDG   + K D
Sbjct: 66  LESSEVGIIILGGFDDIREGDTVKRTGRIMEVPVGEQLIGRVVNALGQPIDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
               +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KFRPVEVKAPGVMQRKSVFEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D    VI   +G++   VR  +E          ++VV A   E   +  +AP     
Sbjct: 185 NQKDQNMIVIYVAIGQKDSTVRTQVETLRQMGAMDYTIVVNAGPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG + L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPIIETQAGDVSAYIPTNVISITDGQVFLDADQFYAGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLASFRELESFAQFG---SDLDAATQAKLARGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|296273871|ref|YP_003656502.1| ATP synthase F1 subunit alpha [Arcobacter nitrofigilis DSM 7299]
 gi|296098045|gb|ADG93995.1| ATP synthase F1, alpha subunit [Arcobacter nitrofigilis DSM 7299]
          Length = 505

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  +++  N+ V + G I S       V  L + V  G+ V  +       G    
Sbjct: 12  SIIKERIDNFELNVDVNETGKIISYADGIAQVYGL-KNVMAGEIVEFENGER---GLASN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V +  +G G  +  G      G+           GRV+NALG+PIDG  ++   +
Sbjct: 68  LEESSVGVVVLGSGNGLREGSSCKRVGKLLETPVGEAMVGRVVNALGEPIDGKGTIETSE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+T+      
Sbjct: 128 TRF-VEEKAPGIMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTVAIDTIL 186

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V   +           ++VV A++ +S  L+ +AP T VT
Sbjct: 187 NQKGENVICIYVAIGQKSSSVASVVRTLEDSGAMEYTIVVNASAADSATLQFLAPYTGVT 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G + L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 247 IGEYFRDNGKHALIVYDDLSKHAVAYREMSLILRRPPGREAYPGDVFYLHSRLLERAAKM 306

Query: 301 EKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E+G  ++TA+  +     +    I  +V SI DG I L  +L   G  P ++   SVS
Sbjct: 307 SDERGAGSMTALPIIETQAGDVAAYIPTNVISITDGQIFLETNLFNSGIRPAINVGLSVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E         +   +D    + +     + + LK
Sbjct: 367 RVGGAAQIKATKQVAGTLKLSLAQYRELE---AFAQFASDLDESTRRELELGQRMVEVLK 423

Query: 419 QSPS 422
           Q  +
Sbjct: 424 QGVN 427


>gi|147675718|ref|YP_001217653.1| flagellum-specific ATP synthase [Vibrio cholerae O395]
 gi|262167490|ref|ZP_06035196.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC27]
 gi|146317601|gb|ABQ22140.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O395]
 gi|227014026|gb|ACP10236.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O395]
 gi|262024062|gb|EEY42757.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC27]
          Length = 439

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 235/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+ G D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKLGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|323975941|gb|EGB71035.1| flagellar protein export ATPase FliI [Escherichia coli TW10509]
 gi|327254539|gb|EGE66155.1| flagellum-specific ATP synthase [Escherichia coli STEC_7v]
          Length = 445

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 229/425 (53%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++    + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTRPEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|303263059|ref|ZP_07348991.1| ATP synthase subunit A [Streptococcus pneumoniae SP14-BS292]
 gi|302635822|gb|EFL66325.1| ATP synthase subunit A [Streptococcus pneumoniae SP14-BS292]
          Length = 504

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 188/443 (42%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +K    + Q  E++  N  V + G ++ I         L + V  G+ +  +  +    G
Sbjct: 9   KKISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENVMSGELLNFENGS---YG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 65  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 125 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 183

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 184 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 244 TGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 303

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 304 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 363

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 364 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 420

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 421 EVLKQPVHKPLPVEKQVTILYAL 443


>gi|6561696|gb|AAF17040.1|AF197708_1 ATPase alpha subunit [Croomia pauciflora]
          Length = 416

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 171/411 (41%), Gaps = 21/411 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IKAGEMVEFA---SGVKGIAMNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIIS 193
           +  +TG++ +D   P+  GQR  +      GK+ +      +               +  
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 QVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 403


>gi|323126994|gb|ADX24291.1| F0F1 ATP synthase subunit alpha [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 501

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +  +       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFENG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQNMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQQSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|229918630|ref|YP_002887276.1| ATPase, FliI/YscN family [Exiguobacterium sp. AT1b]
 gi|229470059|gb|ACQ71831.1| ATPase, FliI/YscN family [Exiguobacterium sp. AT1b]
          Length = 439

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 154/435 (35%), Positives = 248/435 (57%), Gaps = 12/435 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIR 64
           + L  + +        + G +  +  +   +        +G+   +    N     +V+ 
Sbjct: 6   QVLGSIKQSTDGEFTRKIGRVCRVIGLM--IESNGPSAFVGERCLIVLPSNETVEAEVVG 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
            N + V + P G   +I+ G LV   G+  ++       G+V++ LG+P+ G+  +    
Sbjct: 64  FNEERVLLMPYGETTQIAPGCLVKGTGKMLQVPVGEELIGQVLDGLGRPLSGERLV--TG 121

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              ++  K P  +NR R+     TG+R+ID    +  GQR+G+FAGSG+GKSTLL M A+
Sbjct: 122 KRYDVQRKPPNPLNRPRILDALSTGVRMIDGLLTVGKGQRVGLFAGSGVGKSTLLGMIAK 181

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D  +I+L+GERGREV+EFI ++   + + +SVV+VATSD+ P++R     TA  IA
Sbjct: 182 RSSADINVIALIGERGREVKEFIEKELGPEGMARSVVIVATSDQPPLVRLKGAYTATAIA 241

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G  V+L++DS+TRFA + REI   +GE P ++GY  SVF+ LP+LLER G +  
Sbjct: 242 EYFRDQGKEVVLMMDSVTRFAMAQREIGLATGEPPTSKGYTPSVFAMLPQLLERSGTAAT 301

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA  +VLVDGD+ N+PIAD+VR ILDGH V++R+LA  G++P +  L S+SR+ +
Sbjct: 302 --GSITAFYTVLVDGDDMNEPIADAVRGILDGHFVMDRALANRGQFPAIHVLKSISRVMN 359

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +  S + K+   +    +  + +  D+  IG Y+ G +  +D AV + P +  FLKQS  
Sbjct: 360 QIASPEHKEAAQTFRSWLATYIDAEDLINIGAYKKGTNPAIDTAVDKYPYLLTFLKQSIE 419

Query: 423 DLSSEDVFQEITKKL 437
           + +    F++    L
Sbjct: 420 EDA---AFEQTMTHL 431


>gi|238753978|ref|ZP_04615337.1| hypothetical protein yruck0001_28990 [Yersinia ruckeri ATCC 29473]
 gi|238707730|gb|EEQ00089.1| hypothetical protein yruck0001_28990 [Yersinia ruckeri ATCC 29473]
          Length = 513

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTQGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|161507274|ref|YP_001577228.1| F0F1 ATP synthase subunit alpha [Lactobacillus helveticus DPC 4571]
 gi|172048217|sp|A8YUJ9|ATPA_LACH4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160348263|gb|ABX26937.1| ATP synthase alpha subunit [Lactobacillus helveticus DPC 4571]
          Length = 503

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 178/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLNNALA-GELLKFDNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LDSSDVGIIILGQFDNIREGDRVQRTGRIMSVPVGDALIGRVVNPLGQPVDGLGEI-KSD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEEKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + +     I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKNQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|331269317|ref|YP_004395809.1| flagellar protein export ATPase FliI [Clostridium botulinum
           BKT015925]
 gi|329125867|gb|AEB75812.1| flagellar protein export ATPase FliI [Clostridium botulinum
           BKT015925]
          Length = 440

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 166/417 (39%), Positives = 237/417 (56%), Gaps = 10/417 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEIS 82
           G +  +  +   V  +  +V  G+      K +D  + +V+    D V + P+G    I 
Sbjct: 25  GIVKQVIGLTIEVEGIKAFV--GEVCTIYNKENDPIMCEVVGFKEDNVILMPLGELIGIG 82

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V    +   +  S    G+V+N LGK +  DD      +   + +  P  + R+R+
Sbjct: 83  PGCRVIPSKKYLTVKCSEKLLGKVLNGLGKSLKYDDDEVHIGMEYPLDTAPPDPLKRRRI 142

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           +    TG+R ID F     GQR+G+FAGSG+GKST L M AR    D  +I+L+GERGRE
Sbjct: 143 KDSIATGVRAIDGFLTCGEGQRVGIFAGSGVGKSTTLGMIAREAKADVNVIALIGERGRE 202

Query: 202 VREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V +FI +D   + LKKSV+V ATSD+  ++R     TA  IAEYF  KG  V+L++DS+T
Sbjct: 203 VLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFTATAIAEYFRDKGKKVILMMDSVT 262

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + RE+    GE P  +GY  SVF+ LPRL+ER G SEK  G+ITA  +VLVDGD+ 
Sbjct: 263 RFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSEK--GSITAFYTVLVDGDDF 320

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           N+PIAD+VR ILDGHIVL+R+LA +  YP +D L SVSRL ++    + KK  S    L+
Sbjct: 321 NEPIADAVRGILDGHIVLSRALAGKNHYPAIDVLNSVSRLMNEIADNEHKKAASFARDLL 380

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             ++ + D+  IG Y  G +  +D A+    +I D+L+Q   + S    F E    L
Sbjct: 381 ATYKNSEDLINIGAYAQGSNNKVDMAIEYNDMINDYLRQGIKEHSE---FSESVNTL 434


>gi|254506927|ref|ZP_05119066.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus 16]
 gi|219550212|gb|EED27198.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus 16]
          Length = 440

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 151/439 (34%), Positives = 237/439 (53%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E L+Q          V  G +  +  +    T       +G     +  + +   
Sbjct: 1   MLALAERLSQYTTSGLTCRPVASGKLVRVVGLTLEATG--CRAPIGSLCRVETMHGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +Y+ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGESLYLMPSEQITGVLPGAKVTPLTSETGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEKRASFNAQPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R +A+ G YP +D   SVS
Sbjct: 298 NGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITSEEHVLMSKAVRQVLSVCRKNQDLVSIGAYKPGTDPAIDGAFTIKPKLDAYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           QS  +    D+   + + L
Sbjct: 418 QSMKESVPYDMCVNMLRGL 436


>gi|54124956|gb|AAV30224.1| AscN [Aeromonas hydrophila]
          Length = 440

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 159/440 (36%), Positives = 239/440 (54%), Gaps = 12/440 (2%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-- 56
           M  +L+ ++           L+   G ++ +T        +   V +G+    +  ++  
Sbjct: 1   MTLSLDHISGQLRHAIDECRLIQIRGRVTQVTGTLLK--AVVPGVRVGELCHLRNPDNTL 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
               +VI        + P+G    IS    V   G   ++       G+V++ LG P  G
Sbjct: 59  SLQAEVIGFAQHQALLTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFSG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L +      +    P  M+R+R+E+    GIR ID       GQR+G+FA +G GKS
Sbjct: 119 -GQLPEPAAWYPVYRDAPAPMSRKRIEQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           TLL+   RS   D  +++L+GERGREVREFIE D   + LKK+V+VVATSD   + R  A
Sbjct: 178 TLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAKA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+
Sbjct: 238 GFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLM 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L
Sbjct: 298 ERAGQSDK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVL 355

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+ ++  + D +     L   + ++EE   +  IG Y+ G D + D+A+ ++  I 
Sbjct: 356 RSASRVMNQIITPDHQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIR 415

Query: 415 DFLKQSPSDLSS-EDVFQEI 433
            +L+Q   + S+  D    +
Sbjct: 416 QWLRQRTHEPSALPDALATL 435


>gi|171116|gb|AAA66888.1| ATPase 1 alpha subunit [Saccharomyces cerevisiae]
          Length = 544

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 101/439 (23%), Positives = 187/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 39  KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 94

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 95  GVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 154

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 155 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 213

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 214 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 273

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ + + R+++      P    YP 
Sbjct: 274 SEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKASLAYRQLSLMLRRPPGREAYPG 333

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +++G+   TA+  +   G + +  I  +V SI D  I L   L
Sbjct: 334 DVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDAQIFLEAEL 393

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 394 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 450

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 451 TKQTLVRGQRLTQLLKQNQ 469


>gi|317404543|gb|EFV84950.1| ATP synthase subunit alpha [Achromobacter xylosoxidans C54]
          Length = 513

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASADVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NVFGLALNLERDSVGAVILGDYTGVSEGDAVKTTGRILEVPVGPELKGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVNAKATDI-IEKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEDYVEKFTDGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|222099820|ref|YP_002534388.1| ATP synthase subunit alpha [Thermotoga neapolitana DSM 4359]
 gi|254808120|sp|B9K7T9|ATPA_THENN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|221572210|gb|ACM23022.1| ATP synthase subunit alpha [Thermotoga neapolitana DSM 4359]
          Length = 503

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/432 (22%), Positives = 178/432 (41%), Gaps = 18/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   + ++ E+  K+   +      G +  +      V  L++ V + + V      
Sbjct: 1   MRINPGEITKVLEEKIKSFEEKIDLEDTGKVIQVGDGIARVYGLNK-VMVSELVEFVETG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G    +  D V I  +G  ++I  G  V    R   +       GRV+N LG+P+D
Sbjct: 60  --VKGVAFNLEEDNVGIIVLGEYKDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  K P  + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GKGPINAKNFR-PIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   I+        + + VVVA++ +   L+
Sbjct: 177 TAIAIDTIINQKGQGVYCIYVAIGQKKSAIARIIDKLRQYGALEYTTVVVASASDPATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF+  G + L++ D +++ A + R+++      P    YP  +F    
Sbjct: 237 YIAPYAGCAMGEYFAYSGRDALVVYDDLSKHAVAYRQLSLLMRRPPGREAYPGDIFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 297 RLLERAVRLNDKLGGGSLTALPIVETQANDISAYIPTNVISITDGQIYLEPGLFYAGQRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E         +   +D      + +
Sbjct: 357 AINVGLSVSRVGGAAQIKAMKQVAGMLRIELAQYRELE---TFAQFATELDPATRAQIVR 413

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 414 GQRLMELLKQEQ 425


>gi|229528858|ref|ZP_04418248.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 12129(1)]
 gi|229332632|gb|EEN98118.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 12129(1)]
          Length = 439

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 235/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAMPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+ G D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKLGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|6561660|gb|AAF17004.1|AF197672_1 ATPase alpha subunit [Saruma henryi]
          Length = 422

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +    +H+   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALLHRGARLTEVPKQPQYEP 408


>gi|223040079|ref|ZP_03610360.1| flagellar protein export ATPase FliI [Campylobacter rectus RM3267]
 gi|222878665|gb|EEF13765.1| flagellar protein export ATPase FliI [Campylobacter rectus RM3267]
          Length = 434

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 164/434 (37%), Positives = 244/434 (56%), Gaps = 8/434 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQ 61
           NL++L       + +L    G I  I++    ++ L     +GD V    + K+   L  
Sbjct: 2   NLDSLKSKLGA-NLSLSSVFGVIERISATTIEISGLRP--SIGDIVQICAKDKSKSGLAM 58

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V  +  +   I P G  E   +GD V+   +  +I       GRV++    P DG  ++ 
Sbjct: 59  VTEVRQNTALISPFGFVEGYKIGDFVYQSDQGMKIPVGDALLGRVVDPFMNPKDGKGAIV 118

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             + +  IM     AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M
Sbjct: 119 ATEYA-PIMRAPIDAMKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGM 177

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             ++      +++L+GERGREV EFIE  L  +L  +VV+VATSD+SP++RK     A++
Sbjct: 178 IVKNSQAPIKVVALIGERGREVPEFIEKNLRGDLSGTVVIVATSDDSPLMRKYGAFCAMS 237

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF ++G +VL I+DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  
Sbjct: 238 VAEYFKNQGKDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAGKE 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  KG+ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R + + G YPP++ L S SR+
Sbjct: 298 EG-KGSITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSREMTDFGIYPPINILNSASRV 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S + +   + L  L    +E   +  IG Y+ G D  LD A+ +   I  FLKQ 
Sbjct: 357 MSDIASKEHRANAAKLKRLYSLLKENEVLLRIGAYQKGSDKELDLAISKKEFINAFLKQD 416

Query: 421 PSDLSSEDVFQEIT 434
             +  S +  QE+ 
Sbjct: 417 AEEGFSFEQTQELL 430


>gi|260776481|ref|ZP_05885376.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607704|gb|EEX33969.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 441

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 153/439 (34%), Positives = 238/439 (54%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E L+Q          V  G +  +  +    T       +G     +  + +   
Sbjct: 1   MLALAERLSQYQTQGLTCRPVASGKLVRVVGLTLEATG--CRAPIGSLCKVETMHGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +Y+ P      +  G  V        +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGDNLYLMPSEQITGVLPGAKVTPLTSEAGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEKRAAFNADPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              +E+G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGQEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S ++  +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITSEEQILMSKAVRQVLSVCRKNQDLVSIGAYKPGSDPAIDSAFTLKPRLDGYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q+  +    D+   + + L
Sbjct: 418 QAMKETVPYDMCVNMLRNL 436


>gi|59889770|emb|CAH19125.1| Lateral flagellar export/assembly protein (LfiI-like) [Escherichia
           coli]
 gi|284920034|emb|CBG33090.1| lateral flagellar specific ATP synthase (FliI-like) [Escherichia
           coli 042]
          Length = 445

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 231/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +     C+   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ECVGCSLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSESS-GSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|6561691|gb|AAF17035.1|AF197703_1 ATPase alpha subunit [Pleea tenuifolia]
          Length = 421

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 172/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +     +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|257871292|ref|ZP_05650945.1| flagellum-specific ATP synthase [Enterococcus gallinarum EG2]
 gi|257805456|gb|EEV34278.1| flagellum-specific ATP synthase [Enterococcus gallinarum EG2]
          Length = 450

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 162/442 (36%), Positives = 234/442 (52%), Gaps = 10/442 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDN 58
           M   L          S+      G +S +  +   V  L+  V +G+      Q K    
Sbjct: 1   MTFELPITEMRKTAQSQPFFTTYGKVSEVVGLLIKVEGLA--VFIGEICEVALQNKTHTA 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+      V + P+   E I  G LV   G+   +       G  ++ LG+P+D   
Sbjct: 59  LAEVVGFVKKTVLLMPLDQLEGIGPGCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMAL 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L        +    P    RQ++ +   TG+R ID    +  GQRIG+FAGSG+GKSTL
Sbjct: 119 DLESAP-EYPVSQDSPDPFRRQKIAEIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTL 177

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D ++I L+GERGREV+EFI  D   +  +KSVVV ATSD  P++R     
Sbjct: 178 LGMLARYCEADVIVIGLIGERGREVKEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAH 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAEY+  +G  V+L++DS+TRFA + REI  ++GE P  +GY  SVF+ LP+LLER
Sbjct: 238 VATAIAEYYRDQGKKVVLMMDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+K  G+ITA  +VLV+GD+ N+PIAD+VR ILDGHI+L+R +A +  YP +D   S
Sbjct: 298 SGMSDK--GSITAFYTVLVEGDDMNEPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNS 355

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL     S  + K    L   +  + E +D+  IG Y+ G + + D+A+     I  F
Sbjct: 356 LSRLMKTLVSEKQHKHAGELKENMAVYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRF 415

Query: 417 LKQSPSD-LSSEDVFQEITKKL 437
           L+Q   + +  E    E+    
Sbjct: 416 LQQKVDERIPFEQTIFELAHLF 437


>gi|238750326|ref|ZP_04611828.1| hypothetical protein yrohd0001_12620 [Yersinia rohdei ATCC 43380]
 gi|238711559|gb|EEQ03775.1| hypothetical protein yrohd0001_12620 [Yersinia rohdei ATCC 43380]
          Length = 513

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|307701973|ref|ZP_07638981.1| ATP synthase F1, alpha subunit [Streptococcus mitis NCTC 12261]
 gi|307705149|ref|ZP_07642024.1| ATP synthase F1, alpha subunit [Streptococcus mitis SK597]
 gi|307706798|ref|ZP_07643603.1| ATP synthase F1, alpha subunit [Streptococcus mitis SK321]
 gi|307709041|ref|ZP_07645501.1| ATP synthase F1, alpha subunit [Streptococcus mitis SK564]
 gi|322376877|ref|ZP_08051370.1| ATP synthase F1, alpha subunit [Streptococcus sp. M334]
 gi|307616618|gb|EFN95807.1| ATP synthase F1, alpha subunit [Streptococcus mitis NCTC 12261]
 gi|307617883|gb|EFN97045.1| ATP synthase F1, alpha subunit [Streptococcus mitis SK321]
 gi|307620377|gb|EFN99493.1| ATP synthase F1, alpha subunit [Streptococcus mitis SK564]
 gi|307621288|gb|EFO00350.1| ATP synthase F1, alpha subunit [Streptococcus mitis SK597]
 gi|321282684|gb|EFX59691.1| ATP synthase F1, alpha subunit [Streptococcus sp. M334]
          Length = 501

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|167840292|ref|ZP_02466976.1| type III secretion system ATPase [Burkholderia thailandensis
           MSMB43]
          Length = 442

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 165/444 (37%), Positives = 241/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +  +  
Sbjct: 2   NALTDLSRVADAMAARLAIEPAVDMTGKVLEVIGTLMRVVGLE--ATLGELCELRSASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGHGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAPPPNPMSRRMVDAPLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D        L
Sbjct: 417 RTFLNQRTDEYSPPDATLAALHAL 440


>gi|322392087|ref|ZP_08065549.1| ATP synthase F1 sector alpha subunit [Streptococcus peroris ATCC
           700780]
 gi|321144987|gb|EFX40386.1| ATP synthase F1 sector alpha subunit [Streptococcus peroris ATCC
           700780]
          Length = 501

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDSLIGRVVDPLGRPVDGLGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 D-TNKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|254000518|ref|YP_003052581.1| ATP synthase F1 subunit alpha [Methylovorus sp. SIP3-4]
 gi|313202477|ref|YP_004041135.1| ATP synthase f1 subunit alpha [Methylovorus sp. MP688]
 gi|253987197|gb|ACT52054.1| ATP synthase F1, alpha subunit [Methylovorus sp. SIP3-4]
 gi|312441793|gb|ADQ85899.1| ATP synthase F1, alpha subunit [Methylovorus sp. MP688]
          Length = 513

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 189/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   +++L +   +N          G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLSTSEISELIKSRLENFSTSAEARTQGTVISVTDGIVRIHGLS-NVMAGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E+I+ GD+    GR   +       GRV+NALG+PID
Sbjct: 58  -NTYGLALNLERDSVGAVVLGDYEKITEGDICKCTGRILEVPVGPELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKLTDKIEKVAPGVIARKSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  L+
Sbjct: 176 TAVAVDAIINQKGQNMTCIYVAIGQKASTIANVVRKLEEHGAMEYTIVVAASASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEDYVEKFTNGEVKGKTGSLTALPIIETAAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +  ++ + +KQ+ 
Sbjct: 413 LDETTRKQLERGRLVTELMKQAQ 435


>gi|269123792|ref|YP_003306369.1| ATP synthase F1, alpha subunit [Streptobacillus moniliformis DSM
           12112]
 gi|268315118|gb|ACZ01492.1| ATP synthase F1, alpha subunit [Streptobacillus moniliformis DSM
           12112]
          Length = 501

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 106/439 (24%), Positives = 184/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   E ++ +     +N   +      G +  +      +  L +    G+ +      
Sbjct: 1   MKIKPEEISNIIRKEIENYKKRIDVSSVGSVVEVGDGIARIYGL-ETAMAGELLEFPNGA 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           +   G V+ +  + V    +G    I  GD+V   GR    P      GRV+N+LG+PID
Sbjct: 60  T---GMVLNLEENSVGAVILGETRGIKEGDVVKGTGRITEVPAGEALLGRVVNSLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++      M++       ++R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGNIVASKY-MQVERVASGIIDRKPVTEPLQTGIKAIDGMIPIGRGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +   + ++  + D     I   +G++   V               + +V AT+ E   L+
Sbjct: 176 TSIAIDTIINQKDTGIYCIYVAIGQKRSTVASIQRKLEEAGAMEYTTIVAATASEPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AEYF  +G +VL+I D +++ A S RE++      P    YP  VF    
Sbjct: 236 YLAPYAGVAMAEYFMEEGKHVLIIYDDLSKHAVSYREMSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLETDLFNSGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++ S +   + ++ E   +     +   +D      +++
Sbjct: 356 AINAGFSVSRVGGSAQIKAMKQVASKVKMELAQYTE---LLAFAQFGSDLDKATRDQLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I + LKQ      S +
Sbjct: 413 GERIMEILKQKQYSPMSVE 431


>gi|229524132|ref|ZP_04413537.1| flagellum-specific ATP synthase FliI [Vibrio cholerae bv. albensis
           VL426]
 gi|229337713|gb|EEO02730.1| flagellum-specific ATP synthase FliI [Vibrio cholerae bv. albensis
           VL426]
          Length = 439

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 235/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +  N +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMNGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAMPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+ FIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKAFIEEILGVDGSQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|110636608|ref|YP_676815.1| F0F1 ATP synthase subunit alpha [Cytophaga hutchinsonii ATCC 33406]
 gi|123354855|sp|Q11YP1|ATPA_CYTH3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110279289|gb|ABG57475.1| ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase)
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 526

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 100/448 (22%), Positives = 170/448 (37%), Gaps = 36/448 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL+   ++  + + G +  +      +  L++    G+ +  +G      G V+ +  D 
Sbjct: 16  QLSNSLTEAQLEEVGTVLQVGDGVARIYGLTK-AQAGELLEFEGG---LKGMVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +G    I  G  V    +   ++      GRV++ LG PIDG   +      M +
Sbjct: 72  VGAVLLGEYSAIKEGSTVKRTKQIAFVNVGEGMVGRVVDTLGNPIDGKGPITGELYKMPM 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  + RQ V +  +TGI+ ID   P+  GQR  +      GK+T+      +    
Sbjct: 132 ERKAPGVIYRQPVTEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTTVALDAIINQKEF 191

Query: 189 K-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I    G++   +   +           +VVV AT+ +   ++  AP T   
Sbjct: 192 YDRGEPVFCIYVACGQKASTIAGIVGTLEKHGAMAYTVVVAATASDPAPMQYFAPFTGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 VGEYFRDTGRPALVVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKI 311

Query: 301 EKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
            K                      G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 NKSDEIAAAMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLEI 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +D
Sbjct: 372 NLFNSGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +     + LKQ      S +
Sbjct: 429 ASTKLTIERGRRNLEILKQPAFSPVSVE 456


>gi|89112840|gb|ABD61032.1| ATPase alpha subunit [Staphylea trifolia]
          Length = 432

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 173/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|332527641|ref|ZP_08403687.1| F0F1 ATP synthase subunit alpha [Rubrivivax benzoatilyticus JA2]
 gi|332112044|gb|EGJ12020.1| F0F1 ATP synthase subunit alpha [Rubrivivax benzoatilyticus JA2]
          Length = 517

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 186/445 (41%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--G 53
           M  N   +++L +   + L     +   G + S+T     V  LS+ V  G+ +      
Sbjct: 1   MNLNPAEISELIKSRIEGLGVSTDIRNQGTVVSVTDGICRVHGLSE-VMAGEMLEFPPTA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
                 G  + +  D V    +G  E IS GD V   G+   +       GRV+NALG+P
Sbjct: 60  SGQPTYGLALNLERDSVGAVILGEYEHISEGDTVKCTGQILSVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARKSVDQPVQTGLKSIDSMVPIGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        I   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDTIINQKGQNMTCIYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G + L+I D +++ A + R+++      P    +P  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGQDALIIYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKSLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDAATRKQLDRGARVTELLKQAQ 440


>gi|326623464|gb|EGE29809.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 428

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 229/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 18  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 73

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 74  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 131

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 132 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 191

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 192 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 251

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 252 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 309

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 310 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 369

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            + E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 370 LYLEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 425


>gi|167551616|ref|ZP_02345370.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205323605|gb|EDZ11444.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 433

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 161/416 (38%), Positives = 230/416 (55%), Gaps = 10/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I  +++           V +G+      K  + L +V+ IN     + P      +  
Sbjct: 23  GRIQDVSATLLNAWL--PGVFMGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM RQ + 
Sbjct: 79  GQQVMALRRRHQVPVDEALLGRVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPIT 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI      +  K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMN 314

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L + L   + 
Sbjct: 315 EPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLA 374

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++E   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 375 LYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 430


>gi|238759556|ref|ZP_04620718.1| hypothetical protein yaldo0001_33870 [Yersinia aldovae ATCC 35236]
 gi|238793100|ref|ZP_04636728.1| hypothetical protein yinte0001_37370 [Yersinia intermedia ATCC
           29909]
 gi|238702215|gb|EEP94770.1| hypothetical protein yaldo0001_33870 [Yersinia aldovae ATCC 35236]
 gi|238727473|gb|EEQ18999.1| hypothetical protein yinte0001_37370 [Yersinia intermedia ATCC
           29909]
          Length = 513

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|291538498|emb|CBL11609.1| type III secretion system ATPase, FliI/YscN [Roseburia intestinalis
           XB6B4]
          Length = 435

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 158/436 (36%), Positives = 252/436 (57%), Gaps = 11/436 (2%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQVI 63
           T  +  +   K    + G ++ I     T+  +     L D       + +N   + +V+
Sbjct: 3   TFDKYLQLADKTYFNRLGKVTKIVG--LTIESVGPNAKLNDLCRIIIDREQNISTMAEVV 60

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                 + + P    E I +G +V + G    +       G  ++ +G+P D ++ L   
Sbjct: 61  GFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTLDGIGRPTDVEELLLPY 120

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    + +  P  M R+ +++    G++ +D    +  GQRIG+FAGSG+GKSTLL MFA
Sbjct: 121 D--YPVEALPPDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGIFAGSGVGKSTLLGMFA 178

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +I+L+GERGREVREF+  D   + +K+SVV+VATSD+  ++R  A  TA  I
Sbjct: 179 RNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSDKPALIRNKAAKTATAI 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP SV+SE+P+LLER G S+
Sbjct: 239 AEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGTSD 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++  YP +D L S+SR+ 
Sbjct: 299 K--GSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQKNHYPAIDVLQSISRVM 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +++ K+L   L +++  + E  D+  IG Y+ G +  +D A+ ++  + +FL Q  
Sbjct: 357 SSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDYAIQKIQAVNEFLMQKT 416

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   ++ +KL
Sbjct: 417 DEKFEFNEEIDLLRKL 432


>gi|289432449|ref|YP_003462322.1| ATP synthase F1 subunit alpha [Dehalococcoides sp. GT]
 gi|288946169|gb|ADC73866.1| ATP synthase F1, alpha subunit [Dehalococcoides sp. GT]
          Length = 503

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/430 (22%), Positives = 175/430 (40%), Gaps = 14/430 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q  +  + +  +++   + +   G +  +      +  LS      + +   G     LG
Sbjct: 6   QDIVSIIKEQIKEFGAPVSMTSVGSVIEVGDGIARIHGLS-NAKYNELLEFPGG---VLG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V    +G    I  GD V   GR   I+      GRV++ LG+P+DG   +
Sbjct: 62  IALNLEEDSVAAVILGEDSNIKEGDEVKATGRISEITVGKGMIGRVVDPLGRPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K + +  +    P  ++R+ V    +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 -KAESTRPLERIAPNVVDRKSVNTPVQTGIKAIDAMIPVGRGQRELIIGDRSTGKTAIAL 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
               +        I   +G++  +V   +         + ++VV A S ++  L+ +AP 
Sbjct: 181 DTIINQKGGDLVCIYVAIGQKASKVARIVALLEQYGAMEHTIVVAANSSDAVALQYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               I E F  +G + L++ D +T+ A + R+++      P    YP  +F    RLLER
Sbjct: 241 AGCAIGEEFMEQGKDALVVYDDLTKHAWAYRQLSLLLRRPPGREAYPGDLFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +     + +  +  +V SI DG I L   +   G  P V+  
Sbjct: 301 AARLNDKLGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIYLEPDMFNAGIRPAVNVG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK+   L   + ++ E       G     +D      + +   + 
Sbjct: 361 ISVSRVGSSAQTKAMKKVAGKLKMDMGQYRELAAFAQFG--TSELDKSTRMQLERGQRVT 418

Query: 415 DFLKQSPSDL 424
           + LKQ     
Sbjct: 419 EVLKQGQYQP 428


>gi|258621107|ref|ZP_05716141.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
 gi|262166233|ref|ZP_06033970.1| flagellum-specific ATP synthase FliI [Vibrio mimicus VM223]
 gi|262170883|ref|ZP_06038561.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
 gi|258586495|gb|EEW11210.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
 gi|261891959|gb|EEY37945.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
 gi|262025949|gb|EEY44617.1| flagellum-specific ATP synthase FliI [Vibrio mimicus VM223]
          Length = 439

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 235/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +    +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMTGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITAESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAAPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|121592740|ref|YP_984636.1| F0F1 ATP synthase subunit alpha [Acidovorax sp. JS42]
 gi|222109521|ref|YP_002551785.1| f0f1 ATP synthase subunit alpha [Acidovorax ebreus TPSY]
 gi|158513893|sp|A1W2T5|ATPA_ACISJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807694|sp|B9MBA1|ATPA_ACIET RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120604820|gb|ABM40560.1| ATP synthase F1 subcomplex alpha subunit [Acidovorax sp. JS42]
 gi|221728965|gb|ACM31785.1| ATP synthase F1, alpha subunit [Acidovorax ebreus TPSY]
          Length = 519

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 104/450 (23%), Positives = 188/450 (41%), Gaps = 29/450 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-- 53
           MQ N   +++L +   + L     +   G + S+T     V  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVTDGIVRVHGLSD-VMQGEMLEFPAAA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPSFGLALNLERDSVGAVILGEYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPLQTGLKSIDSMVPIGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        I   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIINQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMEYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    +P  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +D    K + +   + + LKQ      S
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQPQYSPLS 445


>gi|284006893|emb|CBA72162.1| type III secretion system ATPase [Arsenophonus nasoniae]
          Length = 429

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 161/431 (37%), Positives = 241/431 (55%), Gaps = 12/431 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLD 68
           LA   +   V+  G ++ +T     +T     V +G+   ++     ++L  ++I     
Sbjct: 2   LAALRTCRPVLLRGRVTEVTGTL--ITAQLPGVKVGELCKLYNSDTGESLDAEIIGFKQQ 59

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              + P G    +S+   V   G    +       G+V++ LG P   ++ +   +    
Sbjct: 60  QAILTPFGDTRGLSIYTEVCPTGTSHLVGVGRHLLGKVLDGLGNPFTAENYIEP-EQWYP 118

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  M R+ +EK    GIR ID       GQR+G+FA +G GKSTL +   RS   
Sbjct: 119 IYRDAPAPMQRKLIEKPLSLGIRAIDGLLTCAEGQRMGIFAAAGGGKSTLFASLIRSADV 178

Query: 188 DKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D ++++L+GERGREVREFIE+    + LK+SV++VATSD   I R  A   A +IAEYF 
Sbjct: 179 DVIVLALIGERGREVREFIEEDLGEEGLKRSVLIVATSDRPAIERAKAGFVATSIAEYFR 238

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +   VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL+ER G S+K  G+
Sbjct: 239 DQNMRVLLLMDSVTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLMERAGQSDK--GS 296

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+ +VLV+GD+  +PIAD  RSILDGHI+L+R LA    YP +D L SVSR+ D+  S
Sbjct: 297 ITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAASHYPAIDVLRSVSRVMDRVIS 356

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              ++    L   + ++EE   +  IG Y+PG D + D+A+ + P I  +L QS  + S 
Sbjct: 357 RKHQQQAQQLRKWLAKYEEIELLLQIGEYQPGNDQLADEAIKRYPQIQSWLCQSTDEKSR 416

Query: 427 EDVFQEITKKL 437
              +++   +L
Sbjct: 417 ---YEQTLSQL 424


>gi|1938379|gb|AAC45616.1| FliI [Caulobacter crescentus CB15]
          Length = 444

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 161/425 (37%), Positives = 244/425 (57%), Gaps = 11/425 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++++  +   V      + +G  V  +      L  +V+        + P G  E + 
Sbjct: 18  GRVAAVNGLLIEVRGGLTRLAVGARVEIERFGQKPLPAEVVGFRETRALLMPFGPVEGVG 77

Query: 83  LGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            G  +     G   + P+  W GR+INA G+PIDG   L +G++   + +  PPA  R R
Sbjct: 78  PGAEIRIVPEGA-VVRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTAPPPAHARGR 136

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +    G+R +++FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGR
Sbjct: 137 VGERLDLGVRSMNVFTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGR 196

Query: 201 EVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+E+    + L+++VVVVATSDE  + R+ A    + I+E+   +   VL ++DS+
Sbjct: 197 EVREFVEETLGEEGLRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQEVLCLMDSV 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVL 314
           TRFA + REI   +GE P  +GY  +VF+ELP+LLER GP            ITA+ +VL
Sbjct: 257 TRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVL 316

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+HN+PIAD+ R ILDGHIV+ R++AE GR+P ++ L S+SR         E+ +V 
Sbjct: 317 VDGDDHNEPIADATRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVK 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
               ++  +    ++  IG YR G D ++D+A+   P I  FL Q   + +S +D F  +
Sbjct: 377 GARQVMSAYSNMEELIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGML 436

Query: 434 TKKLQ 438
            + LQ
Sbjct: 437 GQILQ 441


>gi|289168150|ref|YP_003446419.1| proton-translocating ATPase, F1 sector, alpha-subunit
           [Streptococcus mitis B6]
 gi|288907717|emb|CBJ22554.1| proton-translocating ATPase, F1 sector, alpha-subunit
           [Streptococcus mitis B6]
          Length = 501

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|164685556|gb|ABY66724.1| atp1 [Rafflesia pricei]
          Length = 413

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-MKAGEMVEFA---SGVKGIALNLEKENVGIVFFGSETAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG P+DG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPLDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIFNQKQMNSKATSESETLSCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVKIMEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +H+   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLHRGARLTEVLKQPQ 399


>gi|194367285|ref|YP_002029895.1| F0F1 ATP synthase subunit alpha [Stenotrophomonas maltophilia
           R551-3]
 gi|226739944|sp|B4SJS1|ATPA_STRM5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|194350089|gb|ACF53212.1| ATP synthase F1, alpha subunit [Stenotrophomonas maltophilia
           R551-3]
          Length = 515

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 188/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L ++  + +         G ++S++     +  L+  V  G+ +       ++
Sbjct: 6   NPSEISELIKNRIEKVKLAAESRNEGTVTSVSDGIVRIFGLAD-VMQGEMIELPN---NS 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGGYEHLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG  DL+  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 PLG-TDLTAPVERVAPGVIWRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   +   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTIANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYSGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTEGKVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|50058607|gb|AAT69056.1| F1-ATPase alpha subunit [Jacquemontia blanchetii]
          Length = 430

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIXX 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
              V   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  XXXVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRASSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 359 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 408


>gi|83309727|ref|YP_419991.1| flagellum-specific ATP synthase [Magnetospirillum magneticum AMB-1]
 gi|82944568|dbj|BAE49432.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Magnetospirillum magneticum AMB-1]
          Length = 450

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 175/441 (39%), Positives = 262/441 (59%), Gaps = 7/441 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           M+  +  L    E  S   +   G I+++  +      + + + +GD   V        +
Sbjct: 1   MKFLVRNLISDIERVSN--IQVYGQIAAVQGMLLEAGGVQRTISVGDRCNVVARDGRRVI 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+        + P    E I LG           + P   W GRVIN  G+P+DG   
Sbjct: 59  CEVVGFRQGRALLMPYSPIEGIGLGCRTEVQDAEPVVFPDRGWLGRVINGFGEPVDGLGP 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  GD +  + ++ P A +R RV      G+R ++ F   C GQR+G+FAGSG+GKS+L+
Sbjct: 119 LPGGDTAYPVKAQPPSAHSRSRVSGKIDLGLRSVNAFLTCCRGQRMGIFAGSGVGKSSLM 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
           SM AR+   D  ++ L+GERGRE REFIED LG + +K+SVVVV+TSDESP++R+ A   
Sbjct: 179 SMMARNTSADISVLGLIGERGREAREFIEDDLGPEGMKRSVVVVSTSDESPLMRRQAAYM 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +T+AE+F  +G +VL ++DS+TRFA + REI+ ++GE P ++GY  +VF+ELPRLLER 
Sbjct: 239 TLTVAEFFRDQGLDVLCMMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP    KG+IT + +VLVD D+HN+PIAD+VR ILDGHIVL+RS+AE GRYP ++ L SV
Sbjct: 299 GPGVG-KGSITGLFTVLVDADDHNEPIADAVRGILDGHIVLDRSIAERGRYPAINILRSV 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      +  E  LV     L+  +E+  ++  +G YR G D  +D+A+H  P I  FL
Sbjct: 358 SRTMPGCNNQQENDLVRRARSLLSTYEDMAELIRLGAYRRGTDPKVDEAIHYYPAIEAFL 417

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
            Q  ++ ++ +  + ++ + L
Sbjct: 418 GQLKTEATTLQTCYAQLAEVL 438


>gi|228478222|ref|ZP_04062830.1| ATP synthase F1, alpha subunit [Streptococcus salivarius SK126]
 gi|312864320|ref|ZP_07724554.1| ATP synthase F1, alpha subunit [Streptococcus vestibularis F0396]
 gi|322517278|ref|ZP_08070155.1| ATP synthase F1 sector alpha subunit [Streptococcus vestibularis
           ATCC 49124]
 gi|228249901|gb|EEK09171.1| ATP synthase F1, alpha subunit [Streptococcus salivarius SK126]
 gi|311100321|gb|EFQ58530.1| ATP synthase F1, alpha subunit [Streptococcus vestibularis F0396]
 gi|322124108|gb|EFX95647.1| ATP synthase F1 sector alpha subunit [Streptococcus vestibularis
           ATCC 49124]
          Length = 501

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 178/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +  +       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFENG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETNDVGIIILGDFVAIREGDIVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKHGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTI 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPLH 425


>gi|217076681|ref|YP_002334397.1| F0F1 ATP synthase subunit alpha [Thermosipho africanus TCF52B]
 gi|226739951|sp|B7IG42|ATPA_THEAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|217036534|gb|ACJ75056.1| ATP synthase F1, alpha subunit [Thermosipho africanus TCF52B]
          Length = 507

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/424 (22%), Positives = 178/424 (41%), Gaps = 14/424 (3%)

Query: 5   LETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           ++ L    E + + + ++  G +  +         L+  V   + V         +G   
Sbjct: 9   VKVLESKIEGFKEEINLEDVGKVIQVGDGIARAYGLN-NVMANEMVEFVETG--TIGVAF 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V I  +G  + I  G  V    +   +       GRV+N LG+P+DG   +   
Sbjct: 66  NLEEDNVGIIILGDYKGIKEGHTVRRLKKIMQVPVGEALLGRVVNPLGEPVDGLGPIEAK 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +   ++  K P  + R+ V+   +TGI++ID   P+  GQR  +      GK+ +     
Sbjct: 126 EFR-DVEVKAPGVIYRKPVDTPLQTGIKIIDALIPIGRGQRELIIGDRQTGKTAIAIDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G++   V   +           + VVVA++ ++  L+ +AP    
Sbjct: 185 INQKGKGVYCVYVAIGQKASAVARLVSKLKEAGAMEYTTVVVASAADNAALQYIAPYAGC 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 AMGEYFLYNGKDALVIYDDLSKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            +++   G++TA+  +    ++ +  I  +V SI DG I L  SL   G+ P V+   SV
Sbjct: 305 LDEKYGGGSLTALPIIETQANDISAYIPTNVISITDGQIYLEPSLFYAGQRPAVNIGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  SL   + +++E         +   +D      + +   + + +
Sbjct: 365 SRVGGAAQIKAMKKVAGSLKLDLAQYQELETFAQ---FATELDPATQAQITRGQRLMELM 421

Query: 418 KQSP 421
           KQ  
Sbjct: 422 KQEQ 425


>gi|184154915|ref|YP_001843255.1| F1F0-ATPase alpha subunit [Lactobacillus fermentum IFO 3956]
 gi|226739901|sp|B2GAU3|ATPA_LACF3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|183226259|dbj|BAG26775.1| F1F0-ATPase alpha subunit [Lactobacillus fermentum IFO 3956]
          Length = 512

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 175/426 (41%), Gaps = 14/426 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA    +  V + G ++ +         L +    G+ +  +       G    +  +
Sbjct: 14  KQLANYQDQISVEETGTVTYVGDGVARADGL-ENAMAGELLEFENG---VYGMAQNLESN 69

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G    I  GD V   GR   +       GRV++ LG+ IDG   + K D +  
Sbjct: 70  DVGIVILGDDTAIREGDTVKRTGRIMEVPVGDALLGRVVDPLGRSIDGLGDI-KTDKTRP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSD 185
           I  K P  M R+ V +  +TGI+VID   P+  GQR  +      GK+   + ++  + D
Sbjct: 129 IERKAPGVMERKSVSQPLQTGIKVIDALVPIGRGQRELIIGDRKTGKTSIAIDTIINQKD 188

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G++   VR  +E       L  ++VV A++     L  +AP     + E 
Sbjct: 189 QDMICIYVAIGQKESTVRSQVETLRKFGALDYTIVVSASASNPAPLLYIAPYAGAAMGEE 248

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G +VL+I D +++ A + RE++      P    YP  +F    RLLER      + 
Sbjct: 249 FMFGGRDVLIIYDDLSKQADAYRELSLILRRPPGREAYPGDIFYTHSRLLERAARLSDDL 308

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L+      G+ P +D   SVSR+  
Sbjct: 309 GGGSMTALPVIQTQAGDVSAYIPTNVISITDGQIFLDADSFYAGQRPAIDAGTSVSRVGG 368

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     KK+  +L   I  + E   +     +   +D      + +     + LKQ   
Sbjct: 369 DAQIKAMKKVSGTLRLDIASYNE---LAAFAQFGSDLDAATKARLDRGERTMEVLKQGLH 425

Query: 423 DLSSED 428
                +
Sbjct: 426 APQPVE 431


>gi|312977638|ref|ZP_07789385.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus CTV-05]
 gi|310895377|gb|EFQ44444.1| ATP synthase F1, alpha subunit [Lactobacillus crispatus CTV-05]
          Length = 503

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 107/426 (25%), Positives = 179/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDISEVGVVTYVGDGIARAHGLNDVLS-GELLKFDNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            S  I +K P  M+RQ V++  +TGI+ ID   P+  G+R  +      GK+   + ++ 
Sbjct: 125 KSRPIEAKAPGVMDRQSVDQPLQTGIKAIDALVPIGRGERELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   VG++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAVGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGRDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 NDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|311068145|ref|YP_003973068.1| flagellum-specific ATP synthase [Bacillus atrophaeus 1942]
 gi|310868662|gb|ADP32137.1| flagellum-specific ATP synthase [Bacillus atrophaeus 1942]
          Length = 438

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 165/421 (39%), Positives = 236/421 (56%), Gaps = 13/421 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD---NLGQVIRINLDIVYICPVGIG 78
           + G +  +  +   +        +GD  +   K S       +V+    + + + P    
Sbjct: 18  RYGKVKRVIGLM--IESKGPESSIGDVCLIHPKGSSDKVIKAEVVGFQDENILLMPYLEA 75

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             IS G +V   G   RI   A   G+VI+A G+P+DG   L KG   +      P  M 
Sbjct: 76  ASISPGSIVEATGESLRIKVGAGLIGQVIDAFGEPLDGK-LLPKGLSPVSTDQAPPNPMK 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGE
Sbjct: 135 RPPIREKMAVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI +D   + LK+S+VVVATSD+  ++R  A  TA  IAEYF  KG NV+ ++
Sbjct: 195 RGREVREFIEKDLGPEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G +E  +G ITA  +VLVD
Sbjct: 255 DSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANE--QGTITAFYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+     +       +  
Sbjct: 313 GDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVMSNISAPHHLDAANKF 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + S     +E    
Sbjct: 373 RELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTEESS---TLEESVAA 429

Query: 437 L 437
           L
Sbjct: 430 L 430


>gi|15639393|ref|NP_218842.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025635|ref|YP_001933407.1| flagellum-specific ATP synthase [Treponema pallidum subsp. pallidum
           SS14]
 gi|6016024|sp|O83417|FLII_TREPA RecName: Full=Flagellum-specific ATP synthase
 gi|3322685|gb|AAC65390.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018210|gb|ACD70828.1| flagellum-specific ATP synthase [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059792|gb|ADD72527.1| flagellar protein export ATPase FliI [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 447

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 234/424 (55%), Gaps = 10/424 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYI 72
                V   G+++++  +   +     +  +G+    V + +    + +V+ +    V +
Sbjct: 14  RESEPVKYVGHVTAVRGLL--IESRGPHAVVGELCRIVLRRQGRPLIAEVVGLAGSTVKL 71

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
                   + +G  V   G    +       GRV+NA GK IDG   +    L  E++  
Sbjct: 72  MSYTDTHGVEVGCAVVAEGAALSVPVGDALLGRVLNAFGKAIDGKGEIY-APLRSEVLRA 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               M R  + +   TG+RV+D    +  GQR+G+F+GSG+GKSTL+ M AR+   D  +
Sbjct: 131 SSNPMERLPITRQMVTGVRVLDSLLAVGCGQRLGIFSGSGVGKSTLMGMIARNTDADVSV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREV +F+  D   + LK+SV+V ATSDESP+ R     TA  IAEYF  +G 
Sbjct: 191 IALIGERGREVMDFVAHDLGPEGLKRSVIVSATSDESPLARVRGAYTATAIAEYFRDQGK 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLL+ DS+TRFA + REI   SGELP  RGY   VF  LP+LLER G      G++TA 
Sbjct: 251 QVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPKLLERAGSFS--MGSVTAF 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ ++PI+D+VR I+DGHIVL+R+LA+   YP +D L SVSRLA +   AD K
Sbjct: 309 YTVLVDGDDLDEPISDAVRGIVDGHIVLSRALAQRNHYPAIDVLQSVSRLAHRVLGADMK 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDV 429
           + V  +   +  + E  D+  +G Y+ G D  LD+A+     +  FL Q   + +  +D 
Sbjct: 369 EAVRIVRRALAVYAEVEDLVRVGAYQQGSDAELDRAIAMRAELERFLTQGAQERVRFQDT 428

Query: 430 FQEI 433
              +
Sbjct: 429 VTSL 432


>gi|22128005|ref|NP_671428.1| F0F1 ATP synthase subunit alpha [Yersinia pestis KIM 10]
 gi|45443753|ref|NP_995292.1| F0F1 ATP synthase subunit alpha [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51598253|ref|YP_072444.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis IP
           32953]
 gi|108810158|ref|YP_654074.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Antiqua]
 gi|108814140|ref|YP_649907.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Nepal516]
 gi|145601150|ref|YP_001165226.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Pestoides F]
 gi|150260943|ref|ZP_01917671.1| ATP synthase alpha subunit protein [Yersinia pestis CA88-4125]
 gi|153947933|ref|YP_001403120.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis IP
           31758]
 gi|162420247|ref|YP_001608474.1| F0F1 ATP synthase subunit alpha [Yersinia pestis Angola]
 gi|165926151|ref|ZP_02221983.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939982|ref|ZP_02228519.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009456|ref|ZP_02230354.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213370|ref|ZP_02239405.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401617|ref|ZP_02307111.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422835|ref|ZP_02314588.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425467|ref|ZP_02317220.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170026428|ref|YP_001722933.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis YPIII]
 gi|186897466|ref|YP_001874578.1| F0F1 ATP synthase subunit alpha [Yersinia pseudotuberculosis PB1/+]
 gi|218931099|ref|YP_002348974.1| F0F1 ATP synthase subunit alpha [Yersinia pestis CO92]
 gi|229839833|ref|ZP_04459992.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229841917|ref|ZP_04462073.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229896794|ref|ZP_04511957.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Pestoides A]
 gi|229904683|ref|ZP_04519794.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Nepal516]
 gi|270488393|ref|ZP_06205467.1| ATP synthase F1, alpha subunit [Yersinia pestis KIM D27]
 gi|294505646|ref|YP_003569708.1| ATP synthase subunit A [Yersinia pestis Z176003]
 gi|81593623|sp|Q8Z9S4|ATPA_YERPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81691599|sp|Q663Q6|ATPA_YERPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118573498|sp|Q1C093|ATPA_YERPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122979849|sp|Q1CCH3|ATPA_YERPN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158514115|sp|A4TSJ1|ATPA_YERPP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166990365|sp|A7FPE2|ATPA_YERP3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739960|sp|B2K845|ATPA_YERPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739961|sp|A9R5U1|ATPA_YERPG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739962|sp|B1JRN0|ATPA_YERPY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|21961153|gb|AAM87679.1|AE014015_4 membrane-bound ATP synthase, F1 sector, alpha-subunit [Yersinia
           pestis KIM 10]
 gi|45438623|gb|AAS64169.1| ATP synthase alpha subunit protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51591535|emb|CAH23207.1| ATP synthase alpha subunit protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108777788|gb|ABG20307.1| ATP synthase alpha subunit protein [Yersinia pestis Nepal516]
 gi|108782071|gb|ABG16129.1| ATP synthase alpha subunit protein [Yersinia pestis Antiqua]
 gi|115349710|emb|CAL22691.1| ATP synthase alpha subunit protein [Yersinia pestis CO92]
 gi|145212846|gb|ABP42253.1| ATP synthase alpha subunit protein [Yersinia pestis Pestoides F]
 gi|149290351|gb|EDM40428.1| ATP synthase alpha subunit protein [Yersinia pestis CA88-4125]
 gi|152959428|gb|ABS46889.1| ATP synthase F1, alpha subunit [Yersinia pseudotuberculosis IP
           31758]
 gi|162353062|gb|ABX87010.1| ATP synthase F1, alpha subunit [Yersinia pestis Angola]
 gi|165912108|gb|EDR30748.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922011|gb|EDR39188.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991378|gb|EDR43679.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205668|gb|EDR50148.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958227|gb|EDR55248.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167048999|gb|EDR60407.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055481|gb|EDR65274.1| ATP synthase F1, alpha subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752962|gb|ACA70480.1| ATP synthase F1, alpha subunit [Yersinia pseudotuberculosis YPIII]
 gi|186700492|gb|ACC91121.1| ATP synthase F1, alpha subunit [Yersinia pseudotuberculosis PB1/+]
 gi|229678801|gb|EEO74906.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Nepal516]
 gi|229691256|gb|EEO83309.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229696199|gb|EEO86246.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700232|gb|EEO88268.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis Pestoides A]
 gi|262363811|gb|ACY60532.1| ATP synthase subunit A [Yersinia pestis D106004]
 gi|262367747|gb|ACY64304.1| ATP synthase subunit A [Yersinia pestis D182038]
 gi|270336897|gb|EFA47674.1| ATP synthase F1, alpha subunit [Yersinia pestis KIM D27]
 gi|294356105|gb|ADE66446.1| ATP synthase subunit A [Yersinia pestis Z176003]
 gi|320017458|gb|ADW01030.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 513

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 112/443 (25%), Positives = 189/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+ + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGSI-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +      D L  ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEHDALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|317185331|gb|ADV15992.1| ATP synthase F1 subunit alpha [Plantago maritima]
          Length = 409

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 23/405 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L + +  G+ V          G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVYGL-KEIQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIQEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ LG PIDG  +LG  +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKAMLGRVVDGLGLPIDGKGALGAHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNARATSEKETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKSMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQPQ 397


>gi|15604635|ref|NP_221153.1| F0F1 ATP synthase subunit alpha [Rickettsia prowazekii str. Madrid
           E]
 gi|6226555|sp|O50288|ATPA_RICPR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|3861330|emb|CAA15229.1| ATP SYNTHASE ALPHA CHAIN (atpA) [Rickettsia prowazekii]
 gi|292572452|gb|ADE30367.1| ATP synthase alpha chain [Rickettsia prowazekii Rp22]
          Length = 512

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/447 (23%), Positives = 185/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   +A++ +    N+     + + G + S+      +  L+  V  G+ V  +   
Sbjct: 1   MKLNPIEVAEILQKEIANINFLSELEEVGQVISVGDGIAKIYGLA-NVKSGEVVEFK--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           S   G ++ +  D V    +G   ++  GD V       ++       GR ++ALG PID
Sbjct: 57  SGVKGLILNLENDSVGAVIMGDYSKVKQGDNVKRTKDVLKVLVGKALLGRTVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGDIVSKEYR-HIEMKAPGIIERMSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +      +                I   +G++   V + ++          ++VV+AT
Sbjct: 176 TAIAVDTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTIVVLAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP
Sbjct: 236 ASEAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     KE   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMSKEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + +F E         +   +D 
Sbjct: 356 LFYKGIRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRERE---SFSQFGSDLDP 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
                +     + + LKQ        +
Sbjct: 413 ATKAQIEHGKRLVEILKQDQYHPCPVE 439


>gi|332981434|ref|YP_004462875.1| type III secretion system ATPase, FliI/YscN [Mahella australiensis
           50-1 BON]
 gi|332699112|gb|AEE96053.1| type III secretion system ATPase, FliI/YscN [Mahella australiensis
           50-1 BON]
          Length = 435

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 162/399 (40%), Positives = 233/399 (58%), Gaps = 8/399 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G +S +T    T+      V +G       ++     + +V+    + + + P+G  + I
Sbjct: 21  GAVSRLTG--LTIEADGPGVEIGRLCKILSQDGSISAIAEVVGFREERMLLMPLGNVKGI 78

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V        +       GRV++ LG+P+D    L   D+  ++    P  + RQR
Sbjct: 79  GPGSTVIAMNTSLTVPAGPGLLGRVLDGLGRPMDSAGPL-AADMYYDVEKDPPDPLTRQR 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           + +    GI+ ID      +GQR+GVFAGSG+GKSTL+ M AR    D  +I+L+GERGR
Sbjct: 138 ICEPIVLGIKAIDGLLTCGYGQRMGVFAGSGVGKSTLMGMMARYASADVNVIALIGERGR 197

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EV+EFIE  LG+ L +SV+VVATSD+ P++R  A   A  IAEYF  +G NVLL++DS+T
Sbjct: 198 EVKEFIEKDLGEGLARSVLVVATSDQPPLIRTKAAFVATAIAEYFRDQGCNVLLMMDSLT 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + RE+    GE PV+RGY  SVF+ +PRLLER G S+K  G+IT + +VLVDGD+ 
Sbjct: 258 RFAMAQREVGLAIGEPPVSRGYTPSVFATMPRLLERAGTSDK--GSITGIYTVLVDGDDF 315

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           N+P+ D+ RSILDGHIVL+R LA    YPP+D LASVSR+     +     L S +  ++
Sbjct: 316 NEPVTDNARSILDGHIVLSRELANRNHYPPIDILASVSRVMPDVVTDRHMMLASQIKKIM 375

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             ++   D+  IG Y  G    +D A+  +  I DFL+Q
Sbjct: 376 AVYKGAEDLINIGAYVRGSSRDIDYAIDHIDDINDFLQQ 414


>gi|34539331|gb|AAQ74549.1| F1-ATPase alpha subunit [Idiospermum australiense]
          Length = 411

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 171/407 (42%), Gaps = 23/407 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL 
Sbjct: 296 GDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             + ++ E   +     +   +D +    +++   + + LKQ   + 
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVLKQPQYEP 399


>gi|169303152|gb|ACA53173.1| ATP synthase alpha subunit [Aglaothamnion bipinnatum]
          Length = 404

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 104/404 (25%), Positives = 171/404 (42%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L + V  G+ +  + K    +G  + +  D V +  +G G 
Sbjct: 7   VANIGTVLQVGDGIARVYGLDE-VMAGELLQFEDKEQ-TVGIALNLESDNVGVVLMGDGI 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L KPID   +    D  + I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGDEFLGRVVNPLAKPIDAKGTPAVQDTRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+T+      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTTVALDTIINQKGQDVVCVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +         + ++VV A +DE   L+ +AP T   +AEYF  KG   L+I
Sbjct: 184 QKASSVAQVVSTLEEKGALEYTIVVAANADEPATLQYIAPYTGAALAEYFMYKGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER     K+   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNKDLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|121607474|ref|YP_995281.1| F0F1 ATP synthase subunit alpha [Verminephrobacter eiseniae EF01-2]
 gi|158513934|sp|A1WF56|ATPA_VEREI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|121552114|gb|ABM56263.1| ATP synthase F1, alpha subunit [Verminephrobacter eiseniae EF01-2]
          Length = 537

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 99/445 (22%), Positives = 185/445 (41%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--G 53
           MQ N   +++L +   + L     +   G + S+T     V  LS     G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLGVSADIRNQGTVVSVTDGIVRVHGLSD-AMQGEMLEFPPTA 59

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
             + + G  + +  D V    +G  E IS G  V   GR   +       GRV+NALG+P
Sbjct: 60  DGTPSFGLALNLERDSVGAVILGEYEHISEGGTVKCTGRILEVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + R+ V++  +TG++ ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARKSVDQPMQTGLKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +      +        +   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIINQKGQNMTCVYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G + L++ D +++ A + R+++      P    YP  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K     +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGSSAQTNLIKNQSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ+ 
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQTQ 440


>gi|34539371|gb|AAQ74569.1| F1-ATPase alpha subunit [Murdannia sp. BH 75-650]
          Length = 417

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
                    P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTFSIVDVPAGRAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|27461597|gb|AAM95215.1| ATPase F1 alpha subunit [Bambusa multiplex]
          Length = 418

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 169/412 (41%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDNLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 357 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 405


>gi|293408356|ref|ZP_06652195.1| flagellar protein export ATPase FliI [Escherichia coli B354]
 gi|291471534|gb|EFF14017.1| flagellar protein export ATPase FliI [Escherichia coli B354]
          Length = 445

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 231/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +     C+   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ECVGCSLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSESS-GSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S D ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLDHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + ++ ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQDMREPAALELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|322374418|ref|ZP_08048932.1| ATP synthase F1, alpha subunit [Streptococcus sp. C300]
 gi|331266491|ref|YP_004326121.1| proton-translocating ATPase, F1 sector,alpha-subunit [Streptococcus
           oralis Uo5]
 gi|321279918|gb|EFX56957.1| ATP synthase F1, alpha subunit [Streptococcus sp. C300]
 gi|326683163|emb|CBZ00781.1| proton-translocating ATPase, F1 sector,alpha-subunit [Streptococcus
           oralis Uo5]
          Length = 501

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVSETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDSLIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|315613056|ref|ZP_07887967.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis ATCC
           49296]
 gi|315315166|gb|EFU63207.1| ATP synthase F1 sector alpha subunit [Streptococcus sanguinis ATCC
           49296]
          Length = 501

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVSETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDSLIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|260438805|ref|ZP_05792621.1| flagellar protein export ATPase FliI [Butyrivibrio crossotus DSM
           2876]
 gi|292808794|gb|EFF67999.1| flagellar protein export ATPase FliI [Butyrivibrio crossotus DSM
           2876]
          Length = 434

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 245/428 (57%), Gaps = 14/428 (3%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD---NLGQVIRINLDIVYI 72
           SK    + G +S +     TV  +     L D      ++        +V+    + + +
Sbjct: 12  SKTYYKKMGRVSKVIG--LTVESIGPDAKLNDVCKILLRDKPGQHINAEVVGFKDNRIVL 69

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P    + I  G +V +      ++      G+ ++ LG P DG +   +      +   
Sbjct: 70  MPFENVDGIGPGCIVENTNEALNVNVGEGLLGKTVDGLGVPTDGSE--LQSFERYPVEQT 127

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  M+R  + +    G++ +D    +  GQRIG+FAGSG+GKSTLL MFAR+   D  +
Sbjct: 128 APDPMDRVIINEILPLGVKAVDGLLTIGKGQRIGIFAGSGVGKSTLLGMFARNTKADINV 187

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREVREFI  D   + +K+SVVVVATSD+  ++R  A  TA  IAEYF  +G 
Sbjct: 188 IALIGERGREVREFIERDLGEEGMKRSVVVVATSDKPALIRNKAAKTATAIAEYFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TRF+ + REI   SGE PV RGYP S++SE+P+LLER G S+K  G+IT +
Sbjct: 248 DVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSMYSEMPKLLERAGNSDK--GSITGL 305

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PI D+ RSILDGHI+L+R LA +  YP +D L S+SR   +     +K
Sbjct: 306 YTVLVDGDDFNEPITDTARSILDGHIMLSRKLAHKNHYPAIDVLQSISRCMSQIVDKHQK 365

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +L   L +++  + E  D+  IG Y+ G +  +D A+ ++  + +FL Q+  +      F
Sbjct: 366 ELAGRLKNVMATYTEAEDLINIGAYKSGSNKNIDYAISKIDKVNEFLMQATDEKI---TF 422

Query: 431 QEITKKLQ 438
           ++  ++L+
Sbjct: 423 EDEIRRLE 430


>gi|153836244|ref|ZP_01988911.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ3810]
 gi|149750519|gb|EDM61264.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio parahaemolyticus AQ3810]
          Length = 440

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 157/433 (36%), Positives = 233/433 (53%), Gaps = 12/433 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 11  QQSAIKQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G++++ LG+P DG  S        
Sbjct: 69  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGKILDGLGRPFDGAQSQEPS-AWY 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 128 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAD 187

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   D + +SV+VVATSD   + R  A   A +IAEYF
Sbjct: 188 VDVTVLALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYF 247

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 248 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 306 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPGIDVLRSASRVMNQIV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             D +   + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + S
Sbjct: 366 EPDHQASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPS 425

Query: 426 SEDVFQEITKKLQ 438
                +    +L+
Sbjct: 426 D---LEGAIAQLK 435


>gi|322372411|ref|ZP_08046947.1| ATP synthase F1, alpha subunit [Streptococcus sp. C150]
 gi|321277453|gb|EFX54522.1| ATP synthase F1, alpha subunit [Streptococcus sp. C150]
          Length = 501

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 178/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +  +       G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFENG---AYG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETNDVGIIILGDFVAIREGDIVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKHGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTI 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPLH 425


>gi|6561693|gb|AAF17037.1|AF197705_1 ATPase alpha subunit [Orontium aquaticum]
          Length = 419

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + E F   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEDFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D +    +++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQ 406


>gi|6561692|gb|AAF17036.1|AF197704_1 ATPase alpha subunit [Tofieldia calyculata]
          Length = 421

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D +     ++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAVTQALPNRGARLTEVPKQPQ 406


>gi|15644360|ref|NP_229412.1| F0F1 ATP synthase subunit alpha [Thermotoga maritima MSB8]
 gi|148270309|ref|YP_001244769.1| F0F1 ATP synthase subunit alpha [Thermotoga petrophila RKU-1]
 gi|170289064|ref|YP_001739302.1| ATP synthase F1, alpha subunit [Thermotoga sp. RQ2]
 gi|81625467|sp|Q9X1U7|ATPA_THEMA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201685|sp|A5ILX0|ATPA_THEP1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739952|sp|B1LBC1|ATPA_THESQ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|4982184|gb|AAD36679.1|AE001805_4 ATP synthase F1, subunit alpha [Thermotoga maritima MSB8]
 gi|147735853|gb|ABQ47193.1| ATP synthase F1, alpha subunit [Thermotoga petrophila RKU-1]
 gi|170176567|gb|ACB09619.1| ATP synthase F1, alpha subunit [Thermotoga sp. RQ2]
          Length = 503

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 96/432 (22%), Positives = 176/432 (40%), Gaps = 18/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   + ++ E+  K+   +      G +  +         L++ V + + V      
Sbjct: 1   MRINPGEITKVLEEKIKSFEEKIDLEDTGKVIQVGDGIARAYGLNK-VMVSELVEFVETG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G    +  D V I  +G  ++I  G  V    R   +       GRV+N LG+P+D
Sbjct: 60  --VKGVAFNLEEDNVGIIILGEYKDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  K P  + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GKGPINAKNFR-PIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   I+          + VVVA++ +   L+
Sbjct: 177 TAIAIDTIINQKGQGVYCIYVAIGQKKSAIARIIDKLRQYGAMEYTTVVVASASDPASLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF+  G + L++ D +++ A + R+++      P    YP  +F    
Sbjct: 237 YIAPYAGCAMGEYFAYSGRDALVVYDDLSKHAVAYRQLSLLMRRPPGREAYPGDIFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 297 RLLERAVRLNDKLGGGSLTALPIVETQANDISAYIPTNVISITDGQIYLEPGLFYAGQRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E         +   +D      + +
Sbjct: 357 AINVGLSVSRVGGSAQIKAMKQVAGMLRIDLAQYRELETFAQ---FATELDPATRAQIIR 413

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 414 GQRLMELLKQEQ 425


>gi|306825331|ref|ZP_07458672.1| ATP synthase F1 sector alpha subunit [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304432463|gb|EFM35438.1| ATP synthase F1 sector alpha subunit [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 501

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVSETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D S  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKSRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|227536200|ref|ZP_03966249.1| H(+)-transporting two-sector ATPase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227244097|gb|EEI94112.1| H(+)-transporting two-sector ATPase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 524

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/451 (23%), Positives = 173/451 (38%), Gaps = 42/451 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ L      AE      + + G + +I      +  L++ V  G+ V          G
Sbjct: 13  LREQLSGFKSEAE------LEEVGTVLTIGDGIARIYGLTK-VQSGELVEFDNG---LQG 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V +  +G  E++  GD V    R   I       GRV+N LG+PIDG   +
Sbjct: 63  IVMNLEEDNVGVVLLGSSEDVKEGDTVKRTDRIASIQVGEGLLGRVVNTLGQPIDGKGPV 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M I  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+ +  
Sbjct: 123 VGETYEMPIERKAPGVIYRQPVTEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTAVCI 182

Query: 180 MFARSDCFDK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
               +             I   VG++   V   +           +V+V A++ +   ++
Sbjct: 183 DTILNQKEFYDAGQPVFCIYVAVGQKNSTVANIVRVLEERGAMAYTVIVNASAADPAPMQ 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP+    I E+F   G   L++ D +++ A + RE++      P    YP  VF    
Sbjct: 243 FYAPMAGAAIGEFFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHS 302

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 303 RLLERAAKINSSDEIARNMNDLPASIKHLVKGGGSLTALPIIETQAGDVSAYIPTNVISI 362

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L  +L   G  P ++   SVSR+   A     KK+  +L     ++ E      
Sbjct: 363 TDGQIFLESNLFNAGIRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQYRELE---A 419

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              +   +D      + +     + LKQ   
Sbjct: 420 FAKFGSDLDAATKAVIDKGVRNVEILKQGQF 450


>gi|89112828|gb|ABD61026.1| ATPase alpha subunit [Phytolacca americana]
          Length = 432

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVCGSPKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|323491448|ref|ZP_08096632.1| flagellum-specific ATP synthase [Vibrio brasiliensis LMG 20546]
 gi|323314317|gb|EGA67397.1| flagellum-specific ATP synthase [Vibrio brasiliensis LMG 20546]
          Length = 440

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 151/439 (34%), Positives = 236/439 (53%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + L+Q          V  G +  +  +    T       +G     +    +   
Sbjct: 1   MLALADRLSQYKTQGLTCRPVASGKLVRVVGLTLEATG--CRAPIGSLCKVETMLGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +Y+ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLYLMPSEQITGVLPGAKVTPLTSETGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      ++    + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEKRASFNAEPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               E+G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R +A+ G YP +D   SVS
Sbjct: 298 NGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDGAFTLKPKLDTYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           QS  +    D+   + + L
Sbjct: 418 QSMKESVPYDMCINMLRGL 436


>gi|293365287|ref|ZP_06612004.1| ATP synthase F1 sector alpha subunit [Streptococcus oralis ATCC
           35037]
 gi|307703827|ref|ZP_07640768.1| ATP synthase F1, alpha subunit [Streptococcus oralis ATCC 35037]
 gi|291316737|gb|EFE57173.1| ATP synthase F1 sector alpha subunit [Streptococcus oralis ATCC
           35037]
 gi|307622662|gb|EFO01658.1| ATP synthase F1, alpha subunit [Streptococcus oralis ATCC 35037]
          Length = 501

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ ++ +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVSETGVVTYIGDGIARAHGL-ENAMSGELLIFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDSLIGRVVDPLGRPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|240145503|ref|ZP_04744104.1| flagellar protein export ATPase FliI [Roseburia intestinalis L1-82]
 gi|257202318|gb|EEV00603.1| flagellar protein export ATPase FliI [Roseburia intestinalis L1-82]
          Length = 435

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 158/436 (36%), Positives = 251/436 (57%), Gaps = 11/436 (2%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQVI 63
           T  +  +   K    + G ++ I     T+  +     L D       + +N   + +V+
Sbjct: 3   TFDKYLQLADKTYFNRLGKVTKIVG--LTIESVGPNAKLNDLCRIIIDREQNISTMAEVV 60

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                 + + P    E I +G +V + G    +       G  ++ +G+P D ++ L   
Sbjct: 61  GFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTLDGIGRPTDVEELLLPY 120

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    + +  P  M R+ +++    G++ +D    +  GQRIG+FAGSG+GKSTLL MFA
Sbjct: 121 D--YPVEALPPDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGIFAGSGVGKSTLLGMFA 178

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +I+L+GERGREVREF+  D   + +K+SVV+VATSD+  ++R  A  TA  I
Sbjct: 179 RNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSDKPALIRNKAAKTATAI 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP SV+SE+P+LLER G S+
Sbjct: 239 AEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGTSD 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++  YP +D L S+SR+ 
Sbjct: 299 K--GSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQKNHYPAIDVLQSISRVM 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +++ K+L   L +++  + E  D+  IG Y+ G +  +D A+ +   + +FL Q  
Sbjct: 357 SSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDYAIQKNQAVNEFLMQKT 416

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   ++ +KL
Sbjct: 417 DEKFEFNEEIDLLRKL 432


>gi|163782149|ref|ZP_02177148.1| ATP synthase subunit A [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882681|gb|EDP76186.1| ATP synthase subunit A [Hydrogenivirga sp. 128-5-R1-1]
          Length = 503

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 102/434 (23%), Positives = 182/434 (41%), Gaps = 15/434 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++ L+ L Q  +D+     ++  G +  +         L + V   + V  +G      G
Sbjct: 7   EEALDLLRQQIKDFEAEAKMEEVGVVYYVGDGVARAYGL-ENVMAMEVVEFEGGEK---G 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
               +  D V I  +G    I  G +V    +           GRVIN LG+P+DG   +
Sbjct: 63  LAFNLEEDNVGIIILGSETGIREGSIVRRTNQILSTPVGEGLVGRVINPLGEPLDGKGPV 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            + +    +    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+T+  
Sbjct: 123 -EYEYMSPVEKIAPGVVARKPVHEPLQTGIKAIDSMIPIGRGQRELIIGDRATGKTTICI 181

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++       IE    +     + VVVA++ +   L+ +AP 
Sbjct: 182 DTILNQRDTDVYCIYVAIGQKRSTTARIIELLEKEGAMEYTTVVVASATDPASLQYLAPF 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
              TI EYF   G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 242 VGCTIGEYFRDNGKHALVVYDDLSKHAEAYRQLSLLMRRPPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +     +    I  +V SI DG I L   L  +G  P ++  
Sbjct: 302 AAKLNDDLGAGSLTALPIIETKAGDVAAYIPTNVISITDGQIYLEPDLFNKGVRPAINVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  +L   + +F E         +   +D    + +++   + 
Sbjct: 362 LSVSRVGGAAQIKAMKQVAGTLRLDLAQFRELE---AFVQFASELDKATQQTINRGMRLV 418

Query: 415 DFLKQSPSDLSSED 428
           + LKQ P +    +
Sbjct: 419 ELLKQEPYNPLPVE 432


>gi|255020239|ref|ZP_05292308.1| ATP synthase alpha chain [Acidithiobacillus caldus ATCC 51756]
 gi|254970381|gb|EET27874.1| ATP synthase alpha chain [Acidithiobacillus caldus ATCC 51756]
          Length = 514

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 179/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   +++L  +              G I S+      +  L + V  G+ +   G   
Sbjct: 3   QLNPSEISELIRERIAGFQGRVETRSQGTIISLGDGILRIHGL-EDVMYGEMLELPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
                 + +  D V    +G    +  GD+V   G+  ++       GRV+N LG+P+DG
Sbjct: 60  -KYALALNLEQDNVGAVVLGEFSGLEEGDVVKCTGKVMQVPIGKALLGRVVNTLGQPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +  + +    P  + RQ V+   +TGI+ ID   P+  GQR  +      GK+
Sbjct: 119 KGPVDTQEFDI-LEKIAPGVVERQSVDVPMQTGIKAIDAMVPVGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +        I   VG++   V   +           + VV A + ES  ++ 
Sbjct: 178 AVAVDAIINQKGKDVYCIYVAVGQKASTVAAVVRKLEEYGAMEYTTVVAANASESAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGMDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNADYVESFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL  ++   + ++ E   +     +   +
Sbjct: 358 SDLFNSGIRPAINAGLSVSRVGGAAQTKIIKKLGGNIRLDLAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D I  K + +   + + LKQ  
Sbjct: 415 DEITRKQIERGKRVTELLKQDQ 436


>gi|2665936|gb|AAB88551.1| putative F1-ATP synthase alpha subunit [Rickettsia prowazekii]
          Length = 512

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 105/447 (23%), Positives = 185/447 (41%), Gaps = 27/447 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   +A++ +    N+     + + G + S+      +  L+  V  G+ V  +   
Sbjct: 1   MKLNPIEVAEILQKEIANINFLSELEEVGQVISVGDGIAKIYGLA-NVKSGEVVEFK--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           S   G ++ +  D V    +G   ++  GD V       ++       GR ++ALG PID
Sbjct: 57  SGVKGLILNLENDSVGAVIMGDYSKVKQGDNVKRTKDVLKVLVGKALLGRTVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGDIVSKEYR-HIEMKAPGIIERMSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +      +                I   +G++   V + ++          ++VV+AT
Sbjct: 176 TAIAVDTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTIVVLAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP
Sbjct: 236 ASEAASLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     KE   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 296 GDVFYLHSRLLERAAKMSKEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESD 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  S+   + +F E         +   +D 
Sbjct: 356 LFYKGIRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRERE---SFSQFGSDLDP 412

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
                +     + + LKQ        +
Sbjct: 413 ATQAQIEHGKRLVEILKQDQYHPCPVE 439


>gi|157165901|gb|ABV25026.1| ATP synthase alpha subunit [Boehmeria nivea]
          Length = 459

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 160/381 (41%), Gaps = 19/381 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 6   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 66  GKGEISDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 124

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 125 TAIAIDTILNQKEMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 184

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 185 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 244

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 245 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 304

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D
Sbjct: 305 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLD 361

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + + LKQ  
Sbjct: 362 AATQALLNRGARLTEVLKQPQ 382


>gi|195977925|ref|YP_002123169.1| F0F1 ATP synthase subunit alpha [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868743|ref|YP_002744691.1| ATP synthase alpha chain [Streptococcus equi subsp. zooepidemicus]
 gi|226739942|sp|B4U2D9|ATPA_STREM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|259585437|sp|C0MH19|ATPA_STRS7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|195974630|gb|ACG62156.1| ATP synthase alpha chain AtpA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225702019|emb|CAW99605.1| ATP synthase alpha chain [Streptococcus equi subsp. zooepidemicus]
          Length = 501

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 175/428 (40%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---TFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVFEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQEDLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     K++  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKRVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|313891438|ref|ZP_07825054.1| ATP synthase F1, alpha subunit [Dialister microaerophilus UPII
           345-E]
 gi|313120213|gb|EFR43389.1| ATP synthase F1, alpha subunit [Dialister microaerophilus UPII
           345-E]
          Length = 514

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 112/432 (25%), Positives = 182/432 (42%), Gaps = 16/432 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  + +  E+Y  +L V + G +  +      +  L +    G+ +          G  +
Sbjct: 9   ISVIKKQIENYKVDLNVDEIGTVLEVGDGITHIYGL-ENCMAGELLELPNG---VYGMAL 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V    +G  E I  GD V   GR  ++       GRV+N+LG+PIDG   + K 
Sbjct: 65  NLEESNVGAVLLGKHETIKEGDTVKRTGRLMQVPVGNAVIGRVVNSLGQPIDGKGDI-KT 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D   +I  K P    RQ V    +TG++ ID   P+  GQR  +    G GK+ +     
Sbjct: 124 DAYRDIEIKAPGIAERQPVNVPLQTGLKCIDSMVPIGRGQRELIIGDRGTGKTAIAIDTI 183

Query: 183 RSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +     VI     +G++   V    E          SV+V A + E   ++ +AP + V
Sbjct: 184 LNQKGQNVICVYVSIGQKNSNVVRVYERLKEAGAMDYSVIVHAGAAEGSPMQYLAPYSGV 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAE+F  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 244 SIAEHFMHQGKDVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAR 303

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     +    I  +V SI DG I L   L   G  P ++   SV
Sbjct: 304 LSEELGGGSITALPIIETLAGDVGAYIPTNVISITDGQIFLETGLFYSGVRPAINVGLSV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  +L   + +F E   +     +   +D      + +     + L
Sbjct: 364 SRVGGSAQIKAMKKVAGTLRLDLAQFRE---LAAFAQFGSDLDAATKAQIDRGQRTTEIL 420

Query: 418 KQSP-SDLSSED 428
           KQ   +    ED
Sbjct: 421 KQPQYNPYPVED 432


>gi|27461585|gb|AAM95209.1| ATPase F1 alpha subunit [Joinvillea ascendens]
 gi|27461595|gb|AAM95214.1| ATPase F1 alpha subunit [Pharus latifolius]
          Length = 417

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|91224474|ref|ZP_01259736.1| type III secretion system ATPase [Vibrio alginolyticus 12G01]
 gi|91190816|gb|EAS77083.1| type III secretion system ATPase [Vibrio alginolyticus 12G01]
          Length = 440

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 156/423 (36%), Positives = 229/423 (54%), Gaps = 9/423 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 11  QQSAIKHTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G  ++ LG+P DG  S        
Sbjct: 69  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGTTLDGLGRPFDGTQSQEPS-AWY 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 128 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAE 187

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   + + KSV+VVATSD   + R  A   A +IAEYF
Sbjct: 188 VDVTVLALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYF 247

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 248 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 306 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             D +   + +  ++ ++EE   +  IG Y+ G D + D A+ Q   I  FL+Q   + S
Sbjct: 366 EPDHQASAAHIREMLAKYEEVELLIKIGEYQHGADSLADMAIAQSDDIRAFLRQGTHEPS 425

Query: 426 SED 428
             D
Sbjct: 426 DLD 428


>gi|118594199|ref|ZP_01551546.1| F0F1 ATP synthase subunit alpha [Methylophilales bacterium
           HTCC2181]
 gi|118439977|gb|EAV46604.1| F0F1 ATP synthase subunit alpha [Methylophilales bacterium
           HTCC2181]
          Length = 513

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 191/443 (43%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   +++L ++  K+  V       G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLSTSEISELIKNRIKDFSVSSEARTQGTVVSVTDGIVRVHGLS-NVMSGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD+    G+   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGDYEHISEGDVCKCTGKILEVPVGPELIGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   + ++    P  + R+ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPV-KTKETDKLEKVAPGVIARKSVSQPVQTGLKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +     +     + VV A++ +S  L+
Sbjct: 176 TAVAIDAIINQKGQNMKCIYVAIGQKASTIMNVVRKLEENGAMEYTTVVSASASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGEDALIVYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVENFTKGKVKGKTGSLTALPIIETAAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K + +  +  + +KQ+ 
Sbjct: 413 LDEATRKQLERGKMFTELMKQAQ 435


>gi|317495896|ref|ZP_07954259.1| ATP synthase F1 [Gemella moribillum M424]
 gi|316914073|gb|EFV35556.1| ATP synthase F1 [Gemella moribillum M424]
          Length = 500

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 176/433 (40%), Gaps = 18/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N          G +  +      V  L++ +  G+ V      
Sbjct: 1   MAIKAEEISSLLKSQIENYQFEVKSTDVGTVIEVGDGIARVYGLNEIMS-GELVEFTKTG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +    V I  +G   +I  GD V   GR   +       GRV++ LG+P+D
Sbjct: 60  --VMGLAQNLEDTNVGIVILGPTTDIKEGDEVRRTGRVMDVPVGEELIGRVVDPLGQPVD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I S     M R+ V   F+TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GRGPINTTK-RRPIESPAVGVMGRKSVSVPFQTGIKAIDALVPIGRGQRELIIGDRQTGK 176

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   S+ A+       I   +G++   VR  +E          ++VV A++ +   L 
Sbjct: 177 TAVAIDSILAQKGQDVICIYVAIGQKESTVRSVVETLKEHGALDYTIVVTASASQPAPLL 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AE F   G +V+++ D +++ A + RE++      P    YP  VF    
Sbjct: 237 YIAPYAGVAMAEEFMFNGKDVVIVYDDLSKQAAAYRELSLLLKRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++   G+ITA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 297 RLLERAARVNEDFGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E       G     +D    + + +
Sbjct: 357 AINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELESFAQFG---SDLDPATREKLER 413

Query: 410 VPIIYDFLKQSPS 422
                + LKQ   
Sbjct: 414 GKRTVEVLKQDLH 426


>gi|301646800|ref|ZP_07246653.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
 gi|307136847|ref|ZP_07496203.1| FliI/YscN family ATPase [Escherichia coli H736]
 gi|307315208|ref|ZP_07594787.1| flagellar protein export ATPase FliI [Escherichia coli W]
 gi|331640702|ref|ZP_08341849.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331666535|ref|ZP_08367409.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
 gi|301075006|gb|EFK89812.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
 gi|306905389|gb|EFN35926.1| flagellar protein export ATPase FliI [Escherichia coli W]
 gi|315059477|gb|ADT73804.1| flagellum-specific ATP synthase [Escherichia coli W]
 gi|315616838|gb|EFU97455.1| flagellum-specific ATP synthase [Escherichia coli 3431]
 gi|323379965|gb|ADX52233.1| ATPase, FliI/YscN family [Escherichia coli KO11]
 gi|331040076|gb|EGI12284.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331065759|gb|EGI37643.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
          Length = 445

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 230/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|225630274|ref|YP_002727065.1| ATP synthase F1, alpha subunit [Wolbachia sp. wRi]
 gi|254808124|sp|C0R2Y2|ATPA_WOLWR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|225592255|gb|ACN95274.1| ATP synthase F1, alpha subunit [Wolbachia sp. wRi]
          Length = 513

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 190/432 (43%), Gaps = 23/432 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E +   +  +  G + S+T     V  L +    G+ V      S   G V+ 
Sbjct: 12  SIIREKVETFDNPIKRENIGEVISVTDGIALVYGLEK-AKFGEKVFFA---SGVEGIVLD 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D   I  +G   ++  GD+V   G   ++       GRV+NALG P+D    + +  
Sbjct: 68  LDHDTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGHPMDDGGEI-RAK 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL------ 177
             M+I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+      
Sbjct: 127 NRMDIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIALDTII 186

Query: 178 ----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
               ++     +     +   +G++   V + +         + + VVVA++ +   ++ 
Sbjct: 187 NQKKINDEVNENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDCAPMQF 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    TI E+F   G + L+I D +++ A + R+++      P    YP  +F    R
Sbjct: 247 LAPYAGCTIGEFFRDNGMHCLIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIFYVHSR 306

Query: 293 LLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +KG    TA+  V     + +  +  +V SI DG I L   L  +G  P 
Sbjct: 307 LLERAAKMSDKKGQGSLTALPIVETQAGDVSAYVPTNVISITDGQIFLESELFYKGFRPA 366

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     KK+  S+   + ++ E  D      +   +D  +  ++++ 
Sbjct: 367 VNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFA---KFGSDLDASVQLSLNKG 423

Query: 411 PIIYDFLKQSPS 422
             + + LKQ   
Sbjct: 424 KYLVELLKQKQH 435


>gi|149182506|ref|ZP_01860979.1| flagellum-specific ATP synthase [Bacillus sp. SG-1]
 gi|148849766|gb|EDL63943.1| flagellum-specific ATP synthase [Bacillus sp. SG-1]
          Length = 440

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 162/421 (38%), Positives = 235/421 (55%), Gaps = 10/421 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEE 80
            G +  +  +   +        +GD        +      +V+    + V + P     E
Sbjct: 19  FGKVKRVVGLM--IESQGPKSSIGDMCFIHLSETRRKIRAEVVGFKEETVILMPYSNINE 76

Query: 81  ISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           IS G LV        I       G+V+++LG P+DG +SL KG          P  + R 
Sbjct: 77  ISPGSLVEATSKPLTIKVGHSLIGKVVDSLGNPLDG-ESLPKGLTPAFTEQDPPSPLTRP 135

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            + +  + G+R ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +I+L+GERG
Sbjct: 136 PINEKIEVGVRAIDSMLTVGKGQRVGIFAGSGVGKSTLLGMIARNTTADLNVIALIGERG 195

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFI  D   + LKKS+VV ATSD+  ++R     TA  IAEYF  KG NV+L++DS
Sbjct: 196 REVREFIERDLGEEGLKKSIVVAATSDQPALMRIKGAFTATAIAEYFRDKGMNVMLMMDS 255

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR A + REI    GE P  +GY  SVF+ LP+LLER G +E   G ITA  +VLVDGD
Sbjct: 256 VTRVAMAQREIGLAVGEPPATKGYTPSVFAILPKLLERTGTNE--HGTITAFYTVLVDGD 313

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PIAD+ R ILDGHIVL+R++A +G++P ++ L SVSRL +   S D  +    +  
Sbjct: 314 DMNEPIADTTRGILDGHIVLDRNIANKGQFPAINVLRSVSRLMNHLASPDHLRAAEKIRE 373

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437
           L+  +  + D+  IG Y+ G    +D+A+   P I  FLKQ   + ++ E+  ++I    
Sbjct: 374 LMSTYSNSEDLINIGAYKKGTSQEIDQAITYQPKILSFLKQGTGERVTLEESVRDIINLA 433

Query: 438 Q 438
           +
Sbjct: 434 E 434


>gi|323496552|ref|ZP_08101606.1| flagellum-specific ATP synthase [Vibrio sinaloensis DSM 21326]
 gi|323318396|gb|EGA71353.1| flagellum-specific ATP synthase [Vibrio sinaloensis DSM 21326]
          Length = 440

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 150/439 (34%), Positives = 236/439 (53%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E L Q   +      V  G +  +  +    T       +G     +  + +   
Sbjct: 1   MLALAERLTQYKTEGLTCRPVASGKLVRVVGLTLEATG--CRAPIGSLCRVETMHGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +Y+ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLYLMPSEQITGVLPGAKVTPLTSETGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +      +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TEKRASFNADPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               ++G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R +A+ G YP +D   SVS
Sbjct: 298 NGSPDQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  S +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDGAFTIKPKLDGYLQ 417

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q+  +    D+   + + L
Sbjct: 418 QAMKESVPYDMCVNMLRGL 436


>gi|157827765|ref|YP_001496829.1| F0F1 ATP synthase subunit alpha [Rickettsia bellii OSU 85-389]
 gi|166201674|sp|A8GY42|ATPA_RICB8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157803069|gb|ABV79792.1| F0F1 ATP synthase subunit alpha [Rickettsia bellii OSU 85-389]
          Length = 512

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 187/448 (41%), Gaps = 29/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVINVGDGIAKIYGLA-NVQSGEVVEFE---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++ALG PIDG   +
Sbjct: 62  LVLNLENDSVDAVIMGDDNQVQQGDKVKRTKEVLEVLVGTALLGRVVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K      I  K P  ++R  V +  +TGI+VID+  P+  GQR  +      GK+ +  
Sbjct: 122 -KSKEYRHIEMKAPGIIDRASVSEPVQTGIKVIDLLIPIGRGQRELIIGDRQTGKTAIAI 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          +++V AT+ E+ 
Sbjct: 181 DTIINQKKAHSLNDEKDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTIIVSATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP  A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 ALQFVAPYAACSMGEYFRDNGKHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLE      +E   G++TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLECAAKMSEEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E       G     +D      
Sbjct: 361 IRPAVNVGISVSRVGSAAQIKAMKQVAGSIKLELAQFRELESFLQFG---SDLDSATKAQ 417

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           +     + + LKQ+     S E+    I
Sbjct: 418 IEHGKRLVEILKQAQYHPFSVEEQIISI 445


>gi|254176456|ref|ZP_04883114.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           ATCC 10399]
 gi|160697498|gb|EDP87468.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           ATCC 10399]
          Length = 442

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 167/444 (37%), Positives = 244/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFAH+ REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFAHAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|238797875|ref|ZP_04641367.1| hypothetical protein ymoll0001_940 [Yersinia mollaretii ATCC 43969]
 gi|238718291|gb|EEQ10115.1| hypothetical protein ymoll0001_940 [Yersinia mollaretii ATCC 43969]
          Length = 513

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVSNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|329121455|ref|ZP_08250079.1| ATP synthase F1 sector alpha subunit [Dialister micraerophilus DSM
           19965]
 gi|327469370|gb|EGF14840.1| ATP synthase F1 sector alpha subunit [Dialister micraerophilus DSM
           19965]
          Length = 514

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 112/432 (25%), Positives = 182/432 (42%), Gaps = 16/432 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  + +  E+Y  +L V + G +  +      +  L +    G+ +          G  +
Sbjct: 9   ISVIKKQIENYKVDLNVDEIGTVLEVGDGITHIYGL-ENCMAGELLELPNG---VYGMAL 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V    +G  E I  GD V   GR  ++       GRV+N+LG+PIDG   + K 
Sbjct: 65  NLEESNVGAVLLGKHETIKEGDTVKRTGRLMQVPVGNAVIGRVVNSLGQPIDGKGDI-KT 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D   +I  K P    RQ V    +TG++ ID   P+  GQR  +    G GK+ +     
Sbjct: 124 DAYRDIEIKAPGIAERQPVNVPLQTGLKCIDSMVPIGRGQRELIIGDRGTGKTAIAIDTI 183

Query: 183 RSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +     VI     +G++   V    E          SV+V A + E   ++ +AP + V
Sbjct: 184 LNQKGQNVICVYVSIGQKNSNVVRVYERLKEAGAMDYSVIVHAGAAEGSPMQYLAPYSGV 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAE+F  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 244 SIAEHFMHQGKDVLIIYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAR 303

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     +    I  +V SI DG I L   L   G  P ++   SV
Sbjct: 304 LSEELGGGSITALPIIETLAGDVGAYIPTNVISITDGQIFLETGLFYSGVRPAINVGLSV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  +L   + +F E   +     +   +D      + +     + L
Sbjct: 364 SRVGGSAQIKAMKKVAGTLRLDLAQFRE---LAAFAQFGSDLDAATKAQIDRGQRTTEIL 420

Query: 418 KQSP-SDLSSED 428
           KQ   +    ED
Sbjct: 421 KQPQYNPYPVED 432


>gi|57115579|gb|AAW33096.1| F1-ATPase alpha subunit [Bougainvillea glabra]
          Length = 424

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSPKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|296330838|ref|ZP_06873313.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674356|ref|YP_003866028.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151843|gb|EFG92717.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412600|gb|ADM37719.1| flagellum-specific ATP synthase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 438

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 161/421 (38%), Positives = 240/421 (57%), Gaps = 13/421 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNL-GQVIRINLDIVYICPVGIG 78
           + G +  +  +   +        +GD  +   +G++ + +  +V+    + + + P    
Sbjct: 18  RYGKVKRVIGLM--IESKGPASSIGDVCLIYAKGQSGNVIKAEVVGFQEESILLMPYLEA 75

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             I+ G +V   G   R+   A   G+VI+A G+P+DG   L KG   +      P  M 
Sbjct: 76  ASIAPGSIVEATGESLRVKVGAGLIGQVIDAFGEPLDGK-LLPKGLSPVSTEQSPPNPMK 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ M A+    D  +I+LVGE
Sbjct: 135 RPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI +D   + LK+S+VVVATSD+  ++R  A  TA  IAEYF  KG NV+ ++
Sbjct: 195 RGREVREFIEKDLGDEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G +E   G ITA  +VLVD
Sbjct: 255 DSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANE--HGTITAFYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+     +       +  
Sbjct: 313 GDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNISTRQHLDAANKF 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + +   + +E    
Sbjct: 373 RELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDESA---LLEESIAA 429

Query: 437 L 437
           L
Sbjct: 430 L 430


>gi|329767910|ref|ZP_08259423.1| ATP synthase subunit alpha [Gemella haemolysans M341]
 gi|328838616|gb|EGF88217.1| ATP synthase subunit alpha [Gemella haemolysans M341]
          Length = 500

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 176/433 (40%), Gaps = 18/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N          G +  +      V  L++ +  G+ V      
Sbjct: 1   MAIRAEEISSLLKSQIENYQFEVKSTDVGTVIEVGDGIARVYGLNEIMS-GELVEFTKTG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +    V I  +G   +I  GD V   GR   +       GRV++ LG+P+D
Sbjct: 60  --VMGLAQNLEDTNVGIVILGPTTDIKEGDEVRRTGRVMDVPVGEELIGRVVDPLGQPVD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I S     M R+ V   F+TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GRGPVNTTK-RRPIESPAVGVMGRKSVSVPFQTGIKAIDALVPIGRGQRELIIGDRQTGK 176

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   S+ A+       I   +G++   VR  +E          ++VV A++ +   L 
Sbjct: 177 TAVAIDSILAQKGQDVICIYVAIGQKESTVRSVVETLKEHGALDYTIVVTASASQPAPLL 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AE F   G +V+++ D +++ A + RE++      P    YP  VF    
Sbjct: 237 YIAPYAGVAMAEEFMFNGKDVVIVYDDLSKQAAAYRELSLLLKRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++   G+ITA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 297 RLLERAARVNEDFGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E       G     +D    + + +
Sbjct: 357 AINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELESFAQFG---SDLDPATREKLER 413

Query: 410 VPIIYDFLKQSPS 422
                + LKQ   
Sbjct: 414 GKRTVEVLKQDLH 426


>gi|322421732|ref|YP_004200955.1| FliI/YscN family ATPase [Geobacter sp. M18]
 gi|320128119|gb|ADW15679.1| ATPase, FliI/YscN family [Geobacter sp. M18]
          Length = 441

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 154/421 (36%), Positives = 232/421 (55%), Gaps = 11/421 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++ +  +   +        +G       +    +  +V+    +   + P+G  
Sbjct: 18  VRFHGKVTQVVGLV--IEGFCPETAVGSVCEVHSEGHAPIPAEVVGFRDNKTLLMPLGEL 75

Query: 79  EEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             + LG ++     +  +       GRVI+ LG+PID    +   D    I +     M 
Sbjct: 76  RGVGLGSVISVRREKAALGVGPALLGRVIDGLGEPIDDKGPIEVVD-EYPIYALPVNPMK 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + K    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+GE
Sbjct: 135 RRPIRKPLNLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE+REFI +D   + L+KSVVVVATSD+ P++R      A TIAEYF ++G  VLL++
Sbjct: 195 RGRELREFIEKDLQAEGLRKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS TRFA ++RE+    GE P  +GY  SVF+ LPRLLER G    + G+IT + +VLV+
Sbjct: 255 DSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPRLLERTGNF--QGGSITGLYTVLVE 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI+D++RSILDGHI+L R LA    YPP+D L S SR+     S + + L    
Sbjct: 313 GDDFNEPISDAMRSILDGHIILTRELAARNIYPPIDLLNSASRVMSDVTSREHRALAGQF 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
              +  + +  D+  IG Y+ G +  +D A+ ++  +  +LKQ   D++ E+ F+E    
Sbjct: 373 KETLATYRQAEDMINIGAYKAGSNAKIDMAIAKMEQMIAYLKQ---DVADEENFEESIAA 429

Query: 437 L 437
           L
Sbjct: 430 L 430


>gi|161503491|ref|YP_001570603.1| type III secretion system ATPase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864838|gb|ABX21461.1| hypothetical protein SARI_01567 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 433

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 158/420 (37%), Positives = 232/420 (55%), Gaps = 10/420 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
             + G I  I++           V +G+    +        +V+ IN     + P     
Sbjct: 19  YRRWGRIQDISATLLNAWL--PGVFMGELCCIKPGGE--FAEVVGINGSKALLSPFTSTV 74

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V    R  ++       GRVI+  G+P+DG +         + M   PPAM R
Sbjct: 75  GLHCGQQVMALRRRHQVPVGEVLLGRVIDGFGRPLDGSELPEVCWKDYDAM--PPPAMVR 132

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           + + +   TGIR ID       GQR+G+F+  G+GKSTLL+M   +   D  ++ L+GER
Sbjct: 133 RPMTQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPGADVNVLVLIGER 192

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI      ++ K+ V+VVATSD   + R  A   A TIAE+F   G  V+L+ D
Sbjct: 193 GREVREFIDFTLTKESRKRCVIVVATSDRPALERVRALFVATTIAEFFRDHGKRVVLLAD 252

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REIA  +GE  V+  YP  VFS LPRLLER G  EK  G+ITA  +VLV+G
Sbjct: 253 SLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEG 310

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+P+AD VRS+LDGHIVL+R LAE G YP +D LA++SR+     S + ++L ++L 
Sbjct: 311 DDMNEPLADEVRSLLDGHIVLSRRLAEMGHYPAIDVLATLSRVFPAVTSPEHRQLATTLR 370

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +  +++   +  IG Y+ GVD   DKA+   P I  FL+QS  ++   ++  E  +++
Sbjct: 371 RHLALYQDVELLIRIGEYQRGVDAAADKAIDTYPNICTFLRQSKDEVCGPELLIEKLQQI 430


>gi|98986472|gb|ABF60014.1| ATPase alpha subunit [Sagittaria latifolia]
          Length = 415

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 97/393 (24%), Positives = 171/393 (43%), Gaps = 21/393 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL + +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGKGSLSENE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          L+  A+ +     +   +G++   V + ++     N 
Sbjct: 124 LIIGDRQTGKTAIAVDTILNQKELNKKAKENDKLYCVYVAIGQKRSTVAQLVQILSSANA 183

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
            + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 184 LEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 243

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER     +E   G++TA+  +     + +  I  +V SI
Sbjct: 244 RRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVSAYIPTNVISI 303

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 304 TDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAA 360

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +   +D      +++   + + LKQ   + 
Sbjct: 361 FAQFGSDLDAATQALLNKGERLTEVLKQPQYEP 393


>gi|51244684|ref|YP_064568.1| F0F1 ATP synthase subunit alpha [Desulfotalea psychrophila LSv54]
 gi|81642774|sp|Q6AQ12|ATPA_DESPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|50875721|emb|CAG35561.1| probable ATP synthase, alpha chain (AtpA) [Desulfotalea
           psychrophila LSv54]
          Length = 507

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 103/435 (23%), Positives = 185/435 (42%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ   E ++Q+ +D   +        + G + S+      +  + Q     + +      
Sbjct: 1   MQIKAEEISQIIKDQIGDYETSVDLNETGTVISVGDGIARIYGV-QNCMAMELLEFP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           S  +G  + +  D V    +G  + I  GD+V   G+   +       GRV++ LGKPID
Sbjct: 57  SGIMGLALNLEEDNVGCAVLGSVQGIKEGDIVKRTGKIAEVPVGPAMSGRVVDGLGKPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   DL+ +I    P  + R+ V +   TG + +D  TP+  GQR  V     IGK
Sbjct: 117 GQGPIN-SDLTSKIEVVAPGVIARKGVHEPCYTGAKAVDAMTPVGRGQRELVIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++ A+ +     I   VG++   V   +E          + VV A + +   ++
Sbjct: 176 TALCVDAIIAQKNTDVHCIYVAVGQKKSTVALVVEALRKHGAMEYTTVVAACASDPAPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EY+   G + L+I D +++ A + RE++      P    YP  +F    
Sbjct: 236 YIAPFAGCSMGEYYRDNGQHALIIYDDLSKQAVAYRELSLLLRRPPGREAYPGDIFFNHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +     + +  I  +V SI DG + L  +L   G  P
Sbjct: 296 RLLERASKVNDELGAGSLTALPIIETQAGDVSAFIPTNVISITDGQVYLEPNLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++  +L   + ++ E   +     +   +D+     + +
Sbjct: 356 AVNIGLSVSRVGGSAQCKAMKQVAGTLRLDLAQYRE---LAAFAAFGSDLDVSTQAKLTR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GERLVEILKQPQYQP 427


>gi|238783020|ref|ZP_04627047.1| hypothetical protein yberc0001_3780 [Yersinia bercovieri ATCC
           43970]
 gi|238787864|ref|ZP_04631661.1| hypothetical protein yfred0001_26560 [Yersinia frederiksenii ATCC
           33641]
 gi|238716021|gb|EEQ08006.1| hypothetical protein yberc0001_3780 [Yersinia bercovieri ATCC
           43970]
 gi|238724207|gb|EEQ15850.1| hypothetical protein yfred0001_26560 [Yersinia frederiksenii ATCC
           33641]
          Length = 513

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVSNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|302875872|ref|YP_003844505.1| ATP synthase F1, alpha subunit [Clostridium cellulovorans 743B]
 gi|307689305|ref|ZP_07631751.1| F0F1 ATP synthase subunit alpha [Clostridium cellulovorans 743B]
 gi|302578729|gb|ADL52741.1| ATP synthase F1, alpha subunit [Clostridium cellulovorans 743B]
          Length = 503

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 183/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y++ L  +  G I  I      V  L+     G+ +          G    
Sbjct: 10  SIIKKEIQGYTQKLDTIDSGTIVQIGDGIARVYGLN-NCMEGELLEFPNG---VYGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  GD+V   GR   +       GRV+N LGKPIDG  S+ K  
Sbjct: 66  LEKDNVGCVLLGDEEGIKEGDVVKTTGRVVEVPVGDEVVGRVVNPLGKPIDGKGSI-KHV 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +    S     ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 125 ETRPCESPAYGVIDRQSVNQPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIALDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   V   +           S+VV +T+ +S  L+ +AP + VT
Sbjct: 185 NQKGKNVICIYVAIGQKQSTVANIVGTLTEMGAMDYSIVVSSTASDSAPLQYLAPFSGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G +VL++ D +++ A + R ++      P    YP  +F    RLLER    
Sbjct: 245 MAEYFMKQGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDIFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA+  V     + +  I  +V SI DG I L       G+ P V+   SVS
Sbjct: 305 SPELGGGSITALPIVETLAGDISAYIPTNVISITDGQIFLESEAFNVGQKPAVNAGISVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + ++ E   +     +   +D    + + +   + + LK
Sbjct: 365 RVGGSAQIKAMKQVTGTLRLELAQYRE---LAAFAQFGSDLDKESKRVLEKGRRLMEILK 421

Query: 419 QSPSDL 424
           Q+  + 
Sbjct: 422 QNQYEP 427


>gi|163744317|ref|ZP_02151677.1| flagellum-specific ATP synthase [Oceanibulbus indolifex HEL-45]
 gi|161381135|gb|EDQ05544.1| flagellum-specific ATP synthase [Oceanibulbus indolifex HEL-45]
          Length = 446

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 180/440 (40%), Positives = 263/440 (59%), Gaps = 5/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ     L   A +  +  +   G + +IT +  T   L + + +G+  +  G +     
Sbjct: 1   MQTLFSELTSFAREAGEAEIT--GEVRAITGITLTAVGLERVLGIGERCIVHGSDGPVHA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+ +      + P G    ++ GD V    GR  I P   W GRVI+A   P+DG   L
Sbjct: 59  EVVGLGTHGTELLPFGSWRGVAAGDRVEVAIGRDVIRPDESWKGRVISASAAPLDGKGHL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G+    + +  P A +R+R+     T +R +D+FTPLC GQR+G+FAGSG+GKSTL++
Sbjct: 119 PEGNQPRPLRAAPPGAFDRKRIGPKLATHVRALDVFTPLCQGQRLGIFAGSGVGKSTLMA 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D V+++LVGERGREV++FI   LG + ++K+V+VVAT DE P+ R+ A  TA
Sbjct: 179 MLARYTDCDVVVMALVGERGREVQDFISSDLGPEGMEKAVLVVATGDEPPLTRRQAAWTA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + +AE+F  +G +VLL++DS+TRFA + REI   S E P A+GYP +VFSELP++LER G
Sbjct: 239 MAVAEHFRDQGQHVLLLMDSVTRFAMAQREIGLASREPPTAKGYPPTVFSELPQMLERAG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P    KG+ITA+ +VLVDGD+ NDPIAD+VR I DGHIVL+R +AE+GRYP +D LASVS
Sbjct: 299 PGPVGKGDITAIFTVLVDGDDMNDPIADAVRGITDGHIVLDRKIAEKGRYPAIDLLASVS 358

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R      S  E  L+++    +    +  ++  IG YR G +  LD+A+        FL 
Sbjct: 359 RTLPDCHSDAEYTLLTAAHKALAAHADMEELIRIGAYRSGSNPELDRAIAFAGPCEAFLS 418

Query: 419 QSPSD-LSSEDVFQEITKKL 437
           Q  ++    +  F E+   L
Sbjct: 419 QRKAEHTPPQASFAEVAGML 438


>gi|254301364|ref|ZP_04968808.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
 gi|157811412|gb|EDO88582.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
          Length = 442

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERTK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|53722650|ref|YP_111635.1| type III secretion system ATPase [Burkholderia pseudomallei K96243]
 gi|76817792|ref|YP_335845.1| type III secretion system ATPase [Burkholderia pseudomallei 1710b]
 gi|167820518|ref|ZP_02452198.1| type III secretion system ATPase [Burkholderia pseudomallei 91]
 gi|167830034|ref|ZP_02461505.1| type III secretion system ATPase [Burkholderia pseudomallei 9]
 gi|226200025|ref|ZP_03795574.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
 gi|254186954|ref|ZP_04893470.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254263795|ref|ZP_04954660.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
 gi|52213064|emb|CAH39102.1| putative type III secretion protein [Burkholderia pseudomallei
           K96243]
 gi|76582265|gb|ABA51739.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710b]
 gi|157934638|gb|EDO90308.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|225927877|gb|EEH23915.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
 gi|254214797|gb|EET04182.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
          Length = 442

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|269103171|ref|ZP_06155868.1| flagellum-specific ATP synthase FliI [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163069|gb|EEZ41565.1| flagellum-specific ATP synthase FliI [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 437

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 235/432 (54%), Gaps = 5/432 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           + LA+          V  G ++ +     T+  +     +G     +  N +   +VI  
Sbjct: 5   QELAKFTTQGLACRPVASGRLTRVVG--LTLEAVGCRAPVGSLCKVETVNGELEAEVIGF 62

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + D +++ P      +     V        +       GRVI+ +G P+DG   +     
Sbjct: 63  SGDTLFLMPSEQLTGVMPSAKVTPILQESGLPVGPELLGRVIDGVGNPLDGLGDIY-TQH 121

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                +     + R+ +++    G++ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 122 RASFSAPAINPLKRKPIKEPLDVGLKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRG 181

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFI++ LG+   ++SVVV A +D SP++R     TA+TIAE
Sbjct: 182 TTAQVVVVGLIGERGREVKEFIDEILGEEGRQRSVVVAAPADASPLMRLKGCQTALTIAE 241

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G  ++ 
Sbjct: 242 YFRDQGQDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGDEN 301

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+   
Sbjct: 302 QGSITAFFTVLSEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPA 361

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P +  FL+Q   +
Sbjct: 362 IVTEEHMIMAKAVRQILSICRKNQDLVAIGAYKPGTDPNIDQAFSLKPRLDGFLQQGMKE 421

Query: 424 LSSEDVFQEITK 435
               ++   + +
Sbjct: 422 SVPYEMCVNMLR 433


>gi|259491001|gb|ACW82494.1| ATP synthase subunit 1 [Dionaea muscipula]
          Length = 425

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRATSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALMIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 406


>gi|319785936|ref|YP_004145411.1| ATP synthase F1 subunit alpha [Pseudoxanthomonas suwonensis 11-1]
 gi|317464448|gb|ADV26180.1| ATP synthase F1, alpha subunit [Pseudoxanthomonas suwonensis 11-1]
          Length = 515

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 97/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +   G   + 
Sbjct: 6   NPSEISDLIKSRIEQVKLSAEARNEGTVTSVSDGIVRIFGLAD-VMQGEMIELPG---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  YALALNLERDSVGAVVLGDYEHLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    L+  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 PIN-AKLTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             +  T+ EYF  +G + L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYSGCTMGEYFMDRGQDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +             + G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|330815044|ref|YP_004358749.1| ATP synthase subunit A [Burkholderia gladioli BSR3]
 gi|327367437|gb|AEA58793.1| ATP synthase subunit A [Burkholderia gladioli BSR3]
          Length = 513

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 106/446 (23%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLNPSEISELIKSRIQGLEASADVRNQGTVISVTDGIVRIHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    IS G++V   GR   +       GRV++ALG PID
Sbjct: 58  -NTFGLALNLERDSVGAVILGDYGHISEGNIVKTTGRILEVPVGPELIGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  I    P  + R  V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKATDAIEKIAPGVIWRHGVSQPVQTGVKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +           ++VV A++ +S  ++
Sbjct: 176 TAVALDTIINQKGKDLVCIYVAIGQKASSIMNVVRKLEETGAMEYTIVVSASASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     +    +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIETQAGDVTAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGVSVSRVGGAAQTNVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    K + +   + + LKQ     
Sbjct: 413 LDAATRKQLERGRRVTELLKQPQYQP 438


>gi|307299332|ref|ZP_07579133.1| ATP synthase F1, alpha subunit [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915128|gb|EFN45514.1| ATP synthase F1, alpha subunit [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 504

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 180/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +   + ++ ++  +   ++      G +  I         L + V   + V      
Sbjct: 1   MKISPSEITKVIQNQLEKTDIEFDYFEAGKVIQIGDGIARAYGL-KGVMANELVKFDNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  D V I  +G  +EI  GDLV    R    P      GRV+N LG P+D
Sbjct: 59  --VYGLALNLEEDNVGIVILGGYKEIKEGDLVRRTARIMEVPTGPELLGRVVNPLGIPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  K    + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIDTKSFR-PVDVKATGVVMRKPVDTPLQTGIKAIDATIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +      K I   +G++   +   I+       ++ + +V A++ ++  L 
Sbjct: 176 TAIAIDTIINQKGQNVKCIYVAIGQKTAALARIIDKLNQFGAMEYTTIVFASASDTAALS 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E+F  +G + L+I D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYAGAAMGEHFMFEGQDSLVIYDDLSKHASAYRELSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +    G++TA+  +    ++ +  I  +V SI DG I L+ +L   G  P
Sbjct: 296 RLLERAARLNENFGGGSLTALPIIETQANDVSAYIPTNVISITDGQIYLDPNLFYAGNRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  SL   + ++   RD+     +   +D      + +
Sbjct: 356 AINVGLSVSRVGGAAQIKAMKKIAGSLRIELAQY---RDLLSFAQFATELDKATRDQLTR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GEKLTELLKQDQ 424


>gi|261209866|ref|ZP_05924167.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC341]
 gi|260841052|gb|EEX67577.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC341]
          Length = 439

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 147/437 (33%), Positives = 234/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     Q    +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVQTMTGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGENLFLMPSEQIIGVLPGAKVTPITSESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAAPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q   +    D+   + +
Sbjct: 418 QGMKETVPYDMCVNMLR 434


>gi|7620559|gb|AAF64666.1| F1 ATPase alpha subunit [Pinus strobus]
          Length = 413

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 171/407 (42%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  G LV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVAFGSDTAIKEGSLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L +  L   + +K P  + R+ V +  +TG
Sbjct: 57  TGSIVSVPVGKAMLGRVVDALGVPIDGKGALSEHLLRR-VEAKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRMNSKSKADSEKLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     D L+ S+VV AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQIISEADALEYSIVVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + +KQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVMKQPQ 399


>gi|298345993|ref|YP_003718680.1| H(+)-transporting two-sector ATPase [Mobiluncus curtisii ATCC
           43063]
 gi|304390249|ref|ZP_07372203.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|298236054|gb|ADI67186.1| H(+)-transporting two-sector ATPase [Mobiluncus curtisii ATCC
           43063]
 gi|304326731|gb|EFL93975.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 444

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 167/428 (39%), Positives = 243/428 (56%), Gaps = 8/428 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            L TL       + +   + G + S+  +   V  L   V  G+ V+  G +     +V+
Sbjct: 5   ELATLPSFVSLLNASRPQRVGEVESVVGLSVRVRGLQCSV--GEVVLV-GDDPGVPAEVV 61

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++  I    P+   + + +G  V   G    +       GRVI+A G+P+DG   +   
Sbjct: 62  ALDAGIASCMPLDNLDGLRVGSPVRGTGLPATVPVGPALLGRVIDAAGRPLDGKGPIYAA 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + I    P A+ R R++     G+RV+D    L  GQRIG+FAGSG+GKSTL+SM A
Sbjct: 122 D-RVPIHGAAPNALERARIDMPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIA 180

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    +  +I+LVGERGREVREF+ +D   + L +SVVVVATSDESP+LRK A  TA  +
Sbjct: 181 RGTNAEVCVIALVGERGREVREFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRV 240

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEY+   G +VLL++DS+TR   + REI  + GE P  RGYP S FS + +LLER G   
Sbjct: 241 AEYYRDAGRHVLLMMDSLTRTCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAG--S 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++T + +VLVDGD+HN+PIAD  RSILDGH+VL+R LA  G YP +D L S+SR+A
Sbjct: 299 GAIGSVTGIYTVLVDGDDHNEPIADQARSILDGHVVLDRKLAVAGHYPAIDALGSISRVA 358

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K  + ++++  ++L  ++      +D+  +G Y+ G +  +D AV     I  FL Q  
Sbjct: 359 SKVTTREQREAATALRQIMGAKRSVQDLLDVGAYQAGTNPEVDTAVKYDAEIEAFLTQKT 418

Query: 422 SDLSSEDV 429
            +    D 
Sbjct: 419 DEKVEFDA 426


>gi|89112872|gb|ABD61048.1| ATPase alpha subunit [Hedera helix]
          Length = 431

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|218133663|ref|ZP_03462467.1| hypothetical protein BACPEC_01532 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991038|gb|EEC57044.1| hypothetical protein BACPEC_01532 [Bacteroides pectinophilus ATCC
           43243]
          Length = 441

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 154/412 (37%), Positives = 233/412 (56%), Gaps = 10/412 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYIC 73
            K+   + G ++ +     T+        L D  +      +S    +V+    D V + 
Sbjct: 19  EKSYYKKLGRVTKVVG--LTIESAGPDAKLNDLCIITPADGSSPVHAEVVGFKDDRVLLM 76

Query: 74  PVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P      +  G +V +      +  S    G  ++ LG P DG +          + +  
Sbjct: 77  PFDDVGGVGPGCIVENTEHPLTVKVSDELLGHTLDGLGNPTDGTE--LTSYEEYPVEAAP 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  M R  + +    G++ +D    +  GQR+G+FAGSG+GKSTL+ MFAR+   D  +I
Sbjct: 135 PDPMERVIISEILPLGVKAVDGLLTVGKGQRVGIFAGSGVGKSTLMGMFARNTKADINVI 194

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+  D   + +K+SV+VVATSD+  ++R  A  TA  IAEYF  +G +
Sbjct: 195 ALIGERGREVREFVERDLGTEGMKRSVLVVATSDKPALIRNKAAKTATAIAEYFRDQGRD 254

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRF+ + REI   SGE PV RGYP SV+SE+P+LLER G S+K  G+IT + 
Sbjct: 255 VLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGMSDK--GSITGLY 312

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ N+PI D+ RSILDGHI+LNR LA++  YP VD L S+SR   +    + KK
Sbjct: 313 TVLVDGDDFNEPITDTARSILDGHIMLNRKLAQKNHYPAVDVLQSISRCMSQIVDKEHKK 372

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               L  ++  + E  D+  IG Y+ G +  +D A+ ++  + ++L Q   +
Sbjct: 373 QAGKLKQVLATYGEAEDLINIGAYKAGSNKAIDYAIEKIDAVNEYLCQQTDE 424


>gi|167724372|ref|ZP_02407608.1| type III secretion system ATPase [Burkholderia pseudomallei DM98]
 gi|167898947|ref|ZP_02486348.1| type III secretion system ATPase [Burkholderia pseudomallei 7894]
          Length = 442

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGQRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|46201676|ref|ZP_00054580.2| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
           [Magnetospirillum magnetotacticum MS-1]
          Length = 450

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 176/441 (39%), Positives = 263/441 (59%), Gaps = 7/441 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           M+  +  L    E  S   +   G I+++  +      + + + +GD   V        +
Sbjct: 1   MKFLVRNLISDIERVSN--IQVYGQIAAVQGMLLEAGGVQRTISVGDRCNVVARDGRRVI 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+        + P    E I LG           + P   W GRVIN  G+P+DG   
Sbjct: 59  CEVVGFRQGRALLMPYSPIEGIGLGCRTEVQDAEPVVYPDRGWLGRVINGFGEPVDGLGP 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  GD++  + ++ P A +R RV      G+R ++ F   C GQR+G+FAGSG+GKS+++
Sbjct: 119 LPGGDIAYPVKAQPPSAHSRTRVSGKIDLGLRSVNAFLTCCRGQRMGIFAGSGVGKSSIM 178

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
           SM AR+   D  ++ L+GERGRE REFIED LG + +K+SVVVV+TSDESP+LR+ A   
Sbjct: 179 SMMARNTSADIAVLGLIGERGREAREFIEDDLGPEGMKRSVVVVSTSDESPLLRRQAAYM 238

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +T+AEYF  +G +VL ++DS+TRFA + REI+ ++GE P ++GY  +VF+ELPRLLER 
Sbjct: 239 TLTVAEYFRDQGLDVLCMMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERA 298

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP    KG+IT + +VLVD D+HN+PIAD+VR ILDGHIVL+RS+AE GRYP ++ L SV
Sbjct: 299 GPGTG-KGSITGLFTVLVDADDHNEPIADAVRGILDGHIVLDRSIAERGRYPAINILRSV 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      +  E  LV     L+  +E+  ++  +G YR G D  +D+A+H  P I  FL
Sbjct: 358 SRTMPGCNNQQENDLVRRARALLSTYEDMAELIRLGAYRRGTDPKVDEAIHYYPAIEAFL 417

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
            Q  ++ ++ +  + ++ + L
Sbjct: 418 GQLKTESTNLQTCYAQLAEVL 438


>gi|27550061|gb|AAO18044.1| LscN [Photorhabdus luminescens]
          Length = 440

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 159/443 (35%), Positives = 241/443 (54%), Gaps = 11/443 (2%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-- 56
           M+ +L+ +            L+   G ++ +T        +   V +G+    +  ++  
Sbjct: 1   MKLSLDHIPGQMRHAINECRLIQIRGRVTQVTGTLLK--AVIPGVRIGELCHLRNPDNTL 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
             L +VI        + P+G    IS    V   G   ++       G+V++ LG P  G
Sbjct: 59  SLLAEVIGFQQHQALLTPLGEMFGISSNTEVSPTGAMHQVGVGDYLLGQVLDGLGNPFAG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L +      +    P  M+R+R+E     G+R ID       GQR+G+FA +G GKS
Sbjct: 119 -GQLPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKS 177

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           TLLS   RS   D  +++L+GERGREVREFIE D   + LK+SV+VVATSD   + R  A
Sbjct: 178 TLLSTLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLKRSVLVVATSDRPAMERAKA 237

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A +IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+
Sbjct: 238 GFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLM 297

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G+ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L
Sbjct: 298 ERAGQSDK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVL 355

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S SR+ ++  + + +     L + + ++EE   +  IG Y+ G DL+ D A+ ++  I 
Sbjct: 356 RSASRVMNQIITPEHQAQAGLLRNWLAKYEEVELLLQIGEYQKGQDLVADNAIARIDAIR 415

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            +L+Q   + S       + +++
Sbjct: 416 SWLRQGTHEPSDLPQTLALLQQI 438


>gi|124265761|ref|YP_001019765.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1]
 gi|124258536|gb|ABM93530.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1]
          Length = 487

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 156/438 (35%), Positives = 229/438 (52%), Gaps = 29/438 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEIS 82
           G +  +  +      +   V +G     +       L +V+    D  Y+ P G    ++
Sbjct: 51  GTLVRVAGLVLEAAGI--RVPVGSVCEVRMDGQPPVLAEVVGFAADRAYLMPTGELHGLA 108

Query: 83  LGDLVFHWGRFRISP---------------------SACWCGRVINALGKPIDGDDSLGK 121
            G  V       ++P                          GRVI+ LG P+D    +G 
Sbjct: 109 SGARVVPRSTPSVAPVLGEAHHPWRRSEDRTRHLPIGDGLLGRVIDPLGMPLDRLGPIGA 168

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +  ++ +   AM R  V +   TG+R I+    +  GQRIG+FAGSG+GKS LL M 
Sbjct: 169 V-RNEPLVRRPINAMERDPVREPLDTGVRAINAMLTVGRGQRIGLFAGSGVGKSVLLGMM 227

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVT 240
           A+    D +++ L+GERGREV+EFIED LG+  LK+S+VV A +D  P+ R      A  
Sbjct: 228 AKYTAADVIVVGLIGERGREVKEFIEDILGEEGLKRSIVVAAPADSPPLTRMQGAAYATA 287

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  +G +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP+L+ER G  
Sbjct: 288 IAEHFRDRGQHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNG 347

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LAE G YP +D   S SR+
Sbjct: 348 LNGCGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRDLAESGHYPAIDIERSASRV 407

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    L  L  R+++ RD+  +G Y PG D+ LD AV Q   +   L+Q 
Sbjct: 408 MHNVARPEHLQAARRLRQLWSRYQKARDLIALGAYAPGHDVELDLAVKQHDAMRTLLQQD 467

Query: 421 PSDLSSEDVFQEITKKLQ 438
             D S      +  ++L+
Sbjct: 468 MHDASR---LTDSVRQLR 482


>gi|254185075|ref|ZP_04891664.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
 gi|254194394|ref|ZP_04900826.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|169651145|gb|EDS83838.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|184215667|gb|EDU12648.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
          Length = 442

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|67640496|ref|ZP_00439300.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei GB8 horse 4]
 gi|124382980|ref|YP_001025744.1| type III secretion system ATPase [Burkholderia mallei NCTC 10229]
 gi|126447182|ref|YP_001077828.1| type III secretion system ATPase [Burkholderia mallei NCTC 10247]
 gi|126457565|ref|YP_001076238.1| type III secretion system ATPase [Burkholderia pseudomallei 1106a]
 gi|166999374|ref|ZP_02265213.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei PRL-20]
 gi|167850350|ref|ZP_02475858.1| type III secretion system ATPase [Burkholderia pseudomallei B7210]
 gi|167907279|ref|ZP_02494484.1| type III secretion system ATPase [Burkholderia pseudomallei NCTC
           13177]
 gi|167923484|ref|ZP_02510575.1| type III secretion system ATPase [Burkholderia pseudomallei BCC215]
 gi|217422227|ref|ZP_03453730.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
 gi|237509290|ref|ZP_04522005.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|242313979|ref|ZP_04812996.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
 gi|254205055|ref|ZP_04911408.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei JHU]
 gi|126231333|gb|ABN94746.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106a]
 gi|126240036|gb|ABO03148.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           NCTC 10247]
 gi|147754641|gb|EDK61705.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei JHU]
 gi|217394458|gb|EEC34477.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
 gi|235001495|gb|EEP50919.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|238521216|gb|EEP84669.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei GB8 horse 4]
 gi|242137218|gb|EES23621.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
 gi|243064448|gb|EES46634.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia mallei PRL-20]
 gi|261827070|gb|ABM99373.2| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           NCTC 10229]
          Length = 442

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|269105047|ref|ZP_06157742.1| Type III secretion cytoplasmic ATP synthase [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268160682|gb|EEZ39180.1| Type III secretion cytoplasmic ATP synthase [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 421

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 153/423 (36%), Positives = 230/423 (54%), Gaps = 12/423 (2%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVG 76
           ++   G ++ +T     +  +   V +G+    +  +     L +V+        + P+G
Sbjct: 1   MIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQHHALLTPLG 58

Query: 77  IGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               IS    V   G+   +       G++++ LG+P DG  S  +      +    PP 
Sbjct: 59  NMFGISSNTEVSPLGKMHEVGVGDHLLGKILDGLGRPFDGSQS-TEPSAWYPVYRDAPPP 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS   D  +++L+
Sbjct: 118 MQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTVLALI 177

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFI  D     + +SV+VVATSD   + R  A   A +IAEYF  +G  VLL
Sbjct: 178 GERGREVREFIEHDLGEKGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGKRVLL 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G+ITA+ +VL
Sbjct: 238 LMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITALYTVL 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++      +   +
Sbjct: 296 VEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQASAA 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + S     +E  
Sbjct: 356 HMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSE---LEETV 412

Query: 435 KKL 437
            +L
Sbjct: 413 TQL 415


>gi|6561631|gb|AAF16975.1|AF197643_1 ATPase alpha subunit [Lardizabala biternata]
          Length = 421

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGPSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|77359744|ref|YP_339319.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874655|emb|CAI85876.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 444

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 156/435 (35%), Positives = 244/435 (56%), Gaps = 6/435 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L+Q  +      +   G ++ +  +      L     +G     +  N     +++  
Sbjct: 10  ERLSQYKQHIKPPTLAVAGILTRVVGLTLEAKGL--RAPVGSQCKIETMNGFVDAEIVGF 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           N   +Y+ P      +  G  V        +       GRV++ LG+P+DG   +   + 
Sbjct: 68  NDQTLYLMPNDHISGVLPGARVIPQLNDTGLPVGMSLLGRVVDGLGRPLDGLGKIN-AEH 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            ++   K    ++R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R 
Sbjct: 127 YLKFAQKPINPLSRRPISQPMDVGVRAINSVITVGQGQRMGLFAGSGVGKSVLLGMMTRG 186

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D +++ LVGERGREV+EFIE+ LG +  K+SVVV A +D SP++R     +AVTIAE
Sbjct: 187 SEADVIVVGLVGERGREVKEFIEEILGVEGRKRSVVVAAPADSSPLMRLKGCESAVTIAE 246

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   + 
Sbjct: 247 YFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGGEG 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+  +
Sbjct: 307 QGSITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRELADSGHYPAIDIEKSISRVMPQ 366

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S    +    L  +   +++ +D+  +G Y+ G D +LD+A++ +P +  FL+Q   D
Sbjct: 367 VVSETHMQQARVLKQVYSMYQQNKDMITLGAYQKGTDQMLDQAINMMPRVNAFLQQGMRD 426

Query: 424 LSSEDV-FQEITKKL 437
           + S D   Q + + L
Sbjct: 427 VISYDDGLQGLAQLL 441


>gi|225024611|ref|ZP_03713803.1| hypothetical protein EIKCOROL_01488 [Eikenella corrodens ATCC
           23834]
 gi|224942625|gb|EEG23834.1| hypothetical protein EIKCOROL_01488 [Eikenella corrodens ATCC
           23834]
          Length = 515

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 109/444 (24%), Positives = 192/444 (43%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +NL V       G + S+T     V  LS  V  G+ +   G  
Sbjct: 1   MQLNPAEISELLKSKIENLNVKQEANTYGGVISVTDGIVRVHGLSD-VMQGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLAMNLERDSVGAIVLGEYEHIKEGDQVKCTGRILEVPVGRELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+   + +  I    P  + RQ V++  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGSINAKE-TAPIEKIAPGVIARQSVDQPMQTGLKSVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 176 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FIAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINADEVEKRTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGISVSRVGGSAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 413 LDEATRKQLQHGEVVTELMKQKQF 436


>gi|169303184|gb|ACA53189.1| ATP synthase alpha subunit [Centroceras clavulatum]
          Length = 404

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 102/404 (25%), Positives = 170/404 (42%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L   V  G+ +  + K    +G  + +  D V +  +G G 
Sbjct: 7   VANIGTVLQVGDGIARVYGLDD-VMAGELLQFEDKEQ-TVGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L KPID    +   + +  I S  P  + R
Sbjct: 65  SILEGSSVKSTGKIAQIPVGDNFLGRVVNPLAKPIDAKG-IPSIEDTRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+T+      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTTVALDTIINQKGQDVVCVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +         + ++VV A +DE   L+ +AP T   +AEYF  KG   L+I
Sbjct: 184 QKASSVAQVVSTLEEKGALEYTIVVAANADEPATLQYIAPYTGAALAEYFMYKGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER     ++   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNQDLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|57238812|ref|YP_179948.1| F0F1 ATP synthase subunit alpha [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58578741|ref|YP_196953.1| F0F1 ATP synthase subunit alpha [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58616801|ref|YP_196000.1| F0F1 ATP synthase subunit alpha [Ehrlichia ruminantium str. Gardel]
 gi|75356560|sp|Q5FF66|ATPA_EHRRG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81557361|sp|Q5HC95|ATPA_EHRRW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|57160891|emb|CAH57796.1| ATP synthase alpha chain [Ehrlichia ruminantium str. Welgevonden]
 gi|58416413|emb|CAI27526.1| ATP synthase alpha chain [Ehrlichia ruminantium str. Gardel]
 gi|58417367|emb|CAI26571.1| ATP synthase alpha chain [Ehrlichia ruminantium str. Welgevonden]
          Length = 507

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 187/437 (42%), Gaps = 23/437 (5%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L+ + +  E++   +  +  G + S+      V  L +    G+ V         +G V+
Sbjct: 8   LKVIKERIENFDGQVKCESVGEVISVKDGIALVYGLEK-AKFGEVVAFANG---TIGVVL 63

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            ++ D V I   G    +  GD+V    +    P      GRV++ALG PIDG ++    
Sbjct: 64  NLDCDTVSIVIFGSENSVGEGDIVKCTNQLMDVPVGLELLGRVVDALGNPIDGLENFD-T 122

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              + +  K P  ++RQ V +  +TGI+VID+  P+  GQR  +      GK+ +     
Sbjct: 123 KTRLPVEIKAPGIIDRQSVTEPLQTGIKVIDMLIPIGRGQRELIIGDRKTGKTAIAIDTI 182

Query: 183 RSDC----------FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +                I   +G++   V   I         + ++VVVA + +S  L+
Sbjct: 183 INQKSHNNEVIDKEKVYCIYVAIGQKNSSVARIINKLRESGALEYTIVVVAGASDSASLQ 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP TA  + E+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 243 YLAPYTACAMGEFFRDNGMHCLIVYDDLSKHAAAYRQMSLLLRRPPGREAYPGDVFFLHS 302

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  +  +V SI DG I L   +  +G  P
Sbjct: 303 RLLERAAKMSDKKGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESEIFYKGLRP 362

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+  S+   + ++ E  D      +   VD+   K + +
Sbjct: 363 AVNVGLSVSRVGSSAQIKSVKKVAGSIKLSLAQYRELEDFA---KFGSDVDVHSQKILDR 419

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      S
Sbjct: 420 GRRMMELLKQKQYSPLS 436


>gi|237688581|ref|YP_002905198.1| ATP synthase CF1 alpha subunit [Pinus gerardiana]
 gi|226876042|gb|ACO89298.1| ATP synthase CF1 alpha subunit [Pinus gerardiana]
          Length = 507

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFSSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|258626180|ref|ZP_05721028.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
 gi|258581535|gb|EEW06436.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
          Length = 439

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 235/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +    +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMTGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITAESGLPVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    + +     + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASLNAVPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKETVPYDMCVNMLR 434


>gi|222152832|ref|YP_002562009.1| F0F1 ATP synthase subunit alpha [Streptococcus uberis 0140J]
 gi|254808116|sp|B9DRT4|ATPA_STRU0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|222113645|emb|CAR41550.1| ATP synthase alpha chain [Streptococcus uberis 0140J]
          Length = 501

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 178/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGEFSTIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ATTGFR-PVEAVAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L  SL   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQESLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|293391128|ref|ZP_06635462.1| F0F1 ATP synthase subunit alpha [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951662|gb|EFE01781.1| F0F1 ATP synthase subunit alpha [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 513

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V+      G I S++     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVESEARNTGTIVSVSDGIIRIHGLSE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPIEVIAPGVIERKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G + L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGKDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNKEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|262404476|ref|ZP_06081031.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC586]
 gi|262349508|gb|EEY98646.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC586]
          Length = 439

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 148/437 (33%), Positives = 234/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +      +  G +  +  +    T       +G     +    +   
Sbjct: 1   MLALADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATG--CKAPVGSLCKVETMTGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +       GRVI+ +G P+DG   L
Sbjct: 59  EVVGFSGDNLFLMPSEQIIGVLPGAKVTPITSESGLPVGMELLGRVIDGVGNPLDGLGPL 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      +     + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASFNAAPINPLARKPISEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q+  +    D+   + +
Sbjct: 418 QAMKESVPYDMCVNMLR 434


>gi|6561667|gb|AAF17011.1|AF197679_1 ATPase alpha subunit [Chimonanthus praecox]
          Length = 404

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 93/394 (23%), Positives = 166/394 (42%), Gaps = 22/394 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 305 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               +   +D +    +++   + + LKQ   + 
Sbjct: 362 AFAQFGSDLDAVTQALLNRGARLTEVLKQPQYEP 395


>gi|15834665|ref|NP_296424.1| type III secretion system ATPase [Chlamydia muridarum Nigg]
 gi|270284830|ref|ZP_06194224.1| type III secretion system ATPase [Chlamydia muridarum Nigg]
 gi|270288859|ref|ZP_06195161.1| type III secretion system ATPase [Chlamydia muridarum Weiss]
 gi|301336210|ref|ZP_07224412.1| type III secretion system ATPase [Chlamydia muridarum MopnTet14]
 gi|7190080|gb|AAF38931.1| type III secretion cytoplasmic ATPase SctN [Chlamydia muridarum
           Nigg]
          Length = 442

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 163/445 (36%), Positives = 248/445 (55%), Gaps = 14/445 (3%)

Query: 1   MQKNLETLAQL-AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDN 58
           M++       L  E     L    G I  +  +   +  +   V +G+  + +       
Sbjct: 1   MKELTTEFDTLMTELPEVQLTAVVGRIIEVVGML--IKAVVPDVRVGEVCLVKRHGMEPL 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--G 115
           + +V+    + V++ P+G    +S    V   G    I   A   GRV+N LG+PID   
Sbjct: 59  VTEVVGFTQNFVFLSPLGELSGVSPSSEVIATGLPLHIRAGAGLLGRVLNGLGEPIDIET 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   D    I    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS
Sbjct: 119 KGPLENVDSIYPIFKAPPDPLHREKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKS 178

Query: 176 TLLSMFARSDC-FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           +LL M AR+    D  +I+L+GERGREVREFI  D   + +K+SV+VV+TSD+S  LR  
Sbjct: 179 SLLGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLN 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A      IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+L
Sbjct: 239 AAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G SEK  G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D 
Sbjct: 299 LERAGASEK--GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           LAS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  +
Sbjct: 357 LASISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKL 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKLQ 438
             FLKQ   + ++   ++E  ++L+
Sbjct: 417 NRFLKQDIHEKTN---YEEAAQQLR 438


>gi|242620034|ref|YP_003002038.1| ATP synthase CF1 alpha chain [Aureococcus anophagefferens]
 gi|239997279|gb|ACS36802.1| ATP synthase CF1 alpha chain [Aureococcus anophagefferens]
          Length = 504

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 109/422 (25%), Positives = 180/422 (42%), Gaps = 15/422 (3%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  E Y + + V   G +  +      V  L Q V  G+ +  + K    +G  + + 
Sbjct: 13  IRQQIETYGQEIKVDTIGTVLQVGDGIARVYGLDQ-VMAGELLEFEDK---TIGIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +G G EI  G  V   G+  +I       GRV+N L  PIDG   L  G   
Sbjct: 69  NDNVGAVLMGQGREILEGSTVRATGKIAQIEVCDEIKGRVVNPLALPIDGKGDLPAGTDR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFAR 183
           + I    P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+   L ++  +
Sbjct: 129 L-IEFMAPGIISRKSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTSIALDTIINQ 187

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +           +V+V A++D+S  L+ +AP T   IA
Sbjct: 188 KSENVVCVYVAIGQKASSVAQAVTVLKERGALDYTVIVSASADDSATLQYIAPYTGAAIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  KG   L++ D +T+ A + R+++      P    YP  VF    RLLER      
Sbjct: 248 EHFMYKGQATLVVYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               GN+TA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 ALGGGNMTALPVIETQAGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++   L   + +F E         +   +D      + +   + + LKQ+
Sbjct: 368 GSAAQIKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLRELLKQN 424

Query: 421 PS 422
            +
Sbjct: 425 QN 426


>gi|259491003|gb|ACW82495.1| ATP synthase subunit 1 [Drosera regia]
          Length = 425

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRATSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HSLIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 406


>gi|164685658|gb|ABY66775.1| atp1 [Dendrophthoe pentandra]
          Length = 398

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 93/388 (23%), Positives = 164/388 (42%), Gaps = 19/388 (4%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHEQRR-VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD--------KVIISLVGERGREVREFIEDYLGDNL-K 215
            +      GK+ +      +              +   +G++   V + ++     N  +
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNYSESETLYCVYVAIGQKRSTVAQLVQILEEANALE 184

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++     
Sbjct: 185 YSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRR 244

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILD 333
            P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI D
Sbjct: 245 PPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITD 304

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +    
Sbjct: 305 GQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFA 361

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   +D      +++   + + LKQ  
Sbjct: 362 QFGSDLDAATQALLNRGARLTEILKQPQ 389


>gi|153805565|ref|YP_001382141.1| ATP synthase CF1 alpha subunit [Leptosira terrestris]
 gi|190358180|sp|A6YG64|ATPA_LEPTE RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|134270096|gb|ABO69285.1| CF1 alpha subunit of ATP synthase [Leptosira terrestris]
          Length = 506

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 103/436 (23%), Positives = 182/436 (41%), Gaps = 16/436 (3%)

Query: 6   ETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y  +  VV  G +  +      +  L   V  G+ +         +G  + 
Sbjct: 13  SIIRQQIEQYNDEVTVVNVGTVFQVGDGIARIYGL-DNVMAGELLEFADG---TVGLALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GR++NAL +PIDG   +   +
Sbjct: 69  LETKNVGAVLMGDGLTVQEGTAVRGTGKVAQIPVGEAFLGRIVNALAEPIDGKGEIQTTE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ + +    
Sbjct: 129 TRL-IESNAPGIISRRSVHEPLQTGLVAVDAMIPIGRGQRELIIGDRQTGKTAIATDTIL 187

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   + + +           +++V AT+D    L+ +AP T   
Sbjct: 188 NQKGKDVICVYVAIGQKASSIAQVVNTLTERGALDYTIIVAATADSPATLQYLAPYTGAA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 248 LAEYFMYTGRHTLVIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P V+   SVS
Sbjct: 308 SDQLGSGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSADIFNSGLRPAVNVGISVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   + +F E         +   +D      + +   + + LK
Sbjct: 368 RVGSAAQLPIMKQVAGTLKLELAQFAELE---GFSQFSSDLDQASQNQLARGQRLREILK 424

Query: 419 QSP-SDLSSEDVFQEI 433
           QS  S LS  D    I
Sbjct: 425 QSQASPLSVPDQVASI 440


>gi|15837747|ref|NP_298435.1| F0F1 ATP synthase subunit alpha [Xylella fastidiosa 9a5c]
 gi|81623764|sp|Q9PE83|ATPA_XYLFA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|9106109|gb|AAF83955.1|AE003950_5 ATP synthase, alpha chain [Xylella fastidiosa 9a5c]
          Length = 515

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 187/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L +   + +         G ++S++     +  L+     G+ +    K    
Sbjct: 6   NPSEISELIKTRIEQVKLSAESRNEGTVTSVSDGIVRIFGLAD-AMQGEMIELPNK---T 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  YALALNLERDSVGAVVLGDYEHLREGDIAKTTGRILEVPVGKSLLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +LG    +  +    P  + R+ V +  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 ALGPT-QTAPVERVAPGVIWRKSVNQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              ++ ++ D   K +   +G++   +   +      D L  ++VV AT+ ES  L+ ++
Sbjct: 181 AIDTVISQKDTGIKCVYVAIGQKASTIANIVRKLEENDALDHTIVVAATASESAALQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYAGCTMGEYFMDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTQGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 TTRKQLERGQRVTELMKQKQ 437


>gi|306992030|pdb|3OFN|A Chain A, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992031|pdb|3OFN|B Chain B, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992032|pdb|3OFN|C Chain C, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992039|pdb|3OFN|J Chain J, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992040|pdb|3OFN|K Chain K, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992041|pdb|3OFN|L Chain L, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992048|pdb|3OFN|S Chain S, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992049|pdb|3OFN|T Chain T, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992050|pdb|3OFN|U Chain U, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
          Length = 510

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 188/439 (42%), Gaps = 27/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +     ++ + E+  K +       + G + ++      V  L+      + V     +S
Sbjct: 4   KAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAE-ELVEF---SS 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G  + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG
Sbjct: 60  GVKGMALILEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK- 174
              +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK 
Sbjct: 120 KGPIDAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKT 178

Query: 175 ----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATS 224
                T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+
Sbjct: 179 AVALDTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATA 238

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            E+  L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP 
Sbjct: 239 SEAAPLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPG 298

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L
Sbjct: 299 DVFYLHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAEL 358

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 359 FYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDAS 415

Query: 403 LDKAVHQVPIIYDFLKQSP 421
             + + +   +   LKQ+ 
Sbjct: 416 TKQTLVRGERLTQLLKQNQ 434


>gi|29839803|ref|NP_828909.1| type III secretion system ATPase [Chlamydophila caviae GPIC]
 gi|29834150|gb|AAP04787.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila caviae
           GPIC]
          Length = 442

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 161/444 (36%), Positives = 251/444 (56%), Gaps = 15/444 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           +  + +TL     D     VV  G I+ +  +   +  +   V +G+  + + +     +
Sbjct: 4   LTTDFDTLMSQLNDVHLTTVV--GRITEVVGML--IKAVVPNVRVGEVCLVKRQGMEPLV 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--D 116
            +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID    
Sbjct: 60  TEVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDTELK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   + +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS+
Sbjct: 120 GPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179

Query: 177 LLSMFARSDC-FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           LL M AR+    D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLL 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D L
Sbjct: 300 ERSGASDK--GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVL 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  + 
Sbjct: 358 ASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FLKQ   + ++   ++E  ++L+
Sbjct: 418 RFLKQDIHEKTN---YEEAAQQLR 438


>gi|303249891|ref|ZP_07336093.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307250943|ref|ZP_07532869.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307253315|ref|ZP_07535187.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650954|gb|EFL81108.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306856971|gb|EFM89101.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306859179|gb|EFM91220.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 513

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMSVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEIDNNGFS-PVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|87119484|ref|ZP_01075381.1| flagellum-specific ATP synthase FliI [Marinomonas sp. MED121]
 gi|86164960|gb|EAQ66228.1| flagellum-specific ATP synthase FliI [Marinomonas sp. MED121]
          Length = 441

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 161/438 (36%), Positives = 238/438 (54%), Gaps = 9/438 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            LE L       S    V  G ++ +     T+  +   V LGD    Q  KN     +V
Sbjct: 8   RLEKLKHF--SASPLQPVLEGKVTRMVG--LTMEAVGCKVALGDRCSVQVRKNKWVESEV 63

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    ++ Y+ P      IS G  V    G   +       GRV+N LG P+DG   + K
Sbjct: 64  VGFTGNLTYLMPTEAINGISPGARVKPLMGEGMMMVGPELLGRVVNGLGYPLDGKGPI-K 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               + +   +   + R+ +      GI+ I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 123 AKEKIGMQGDIINPLKRKPITDTLDVGIKSINSLLTVGKGQRLGLFAGSGVGKSMLLGMM 182

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            R    D  I+ L+GERGREV+EFIE  LG + L +SVV+ + +D+S ++R  A      
Sbjct: 183 TRFTEADITIVGLIGERGREVKEFIEQILGSEGLARSVVIASPADDSALMRLRAATLTTR 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEY+  +G NVLL++DS+TR+A + REIA + GE P  +GYP SVFS++P+L+ER G  
Sbjct: 243 IAEYYRDQGKNVLLLMDSLTRYAQAQREIALSVGEPPATKGYPPSVFSKIPQLVERAGNG 302

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAEEG YP +D  AS+SR 
Sbjct: 303 AEGSGSITAFYTVLTEGDDQQDPIADASRAILDGHFVLSRRLAEEGHYPAIDIEASISRA 362

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S    K    +  L  ++++ +D+  +G Y  G D   D+A+  +P I  FL+Q 
Sbjct: 363 MPHIVSDAHLKGALRVKQLYSKYQQNQDLIAVGAYVKGADPDTDQAIALMPEIKSFLQQG 422

Query: 421 PSDLSSEDV-FQEITKKL 437
            S+  + D   + + K +
Sbjct: 423 LSEQFNIDASLEALVKAM 440


>gi|241888610|ref|ZP_04775917.1| ATP synthase F1, alpha subunit [Gemella haemolysans ATCC 10379]
 gi|241864633|gb|EER69008.1| ATP synthase F1, alpha subunit [Gemella haemolysans ATCC 10379]
          Length = 500

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 176/433 (40%), Gaps = 18/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   +N          G +  +      V  L++ +  G+ V      
Sbjct: 1   MAIKAEEISSLLKSQIENYQFEVKSTDVGTVIEVGDGIARVYGLNEIMS-GELVEFTKTG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              +G    +    V I  +G   +I  GD V   GR   +       GRV++ LG+P+D
Sbjct: 60  --VMGLAQNLEDTNVGIVILGPTTDIKEGDEVRRTGRVMDVPVGEELIGRVVDPLGQPVD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        I S     M R+ V   F+TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GRGPVNTTK-RRPIESPAVGVMGRKSVSVPFQTGIKAIDALVPIGRGQRELIIGDRQTGK 176

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   S+ A+       I   +G++   VR  +E          ++VV A++ +   L 
Sbjct: 177 TAVAIDSILAQKGQDVICIYVAIGQKESTVRSVVETLKEHGALDYTIVVTASASQPAPLL 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   V +AE F   G +V+++ D +++ A + RE++      P    YP  VF    
Sbjct: 237 YIAPYAGVAMAEEFMFNGKDVVIVYDDLSKQAAAYRELSLLLKRPPGREAYPGDVFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++   G+ITA+  V     + +  I  +V SI DG I L   L   G  P
Sbjct: 297 RLLERAARVNEDFGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGIRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  +L   +  + E       G     +D    + + +
Sbjct: 357 AINAGLSVSRVGGSAQIKAMKKVSGTLRLDLASYRELESFAQFG---SDLDPATREKLER 413

Query: 410 VPIIYDFLKQSPS 422
                + LKQ   
Sbjct: 414 GKRTVEVLKQDLH 426


>gi|168483881|ref|ZP_02708833.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|168492579|ref|ZP_02716722.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC0288-04]
 gi|194398243|ref|YP_002038140.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae G54]
 gi|225857135|ref|YP_002738646.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae P1031]
 gi|226739946|sp|B5E673|ATPA_STRP4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808118|sp|C1CLK8|ATPA_STRZP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|172042777|gb|EDT50823.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1873-00]
 gi|183573277|gb|EDT93805.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC0288-04]
 gi|194357910|gb|ACF56358.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae G54]
 gi|225724967|gb|ACO20819.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae P1031]
 gi|301802230|emb|CBW34980.1| ATP synthase alpha chain [Streptococcus pneumoniae INV200]
 gi|332200069|gb|EGJ14142.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA47368]
          Length = 501

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 188/443 (42%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + V  G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENVMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 TGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|6561630|gb|AAF16974.1|AF197642_1 ATPase alpha subunit [Akebia quinata]
          Length = 422

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGPSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 406


>gi|315654581|ref|ZP_07907487.1| flagellar protein export ATPase FliI [Mobiluncus curtisii ATCC
           51333]
 gi|315657514|ref|ZP_07910396.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491045|gb|EFU80664.1| flagellar protein export ATPase FliI [Mobiluncus curtisii ATCC
           51333]
 gi|315491986|gb|EFU81595.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 444

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 167/428 (39%), Positives = 243/428 (56%), Gaps = 8/428 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            L TL       + +   + G + S+  +   V  L   V  G+ V+  G +     +V+
Sbjct: 5   ELATLPSFVSLLNASRPQRVGEVESVVGLSVRVRGLQCSV--GEVVLV-GDDPGVPAEVV 61

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++  I    P+   + + +G  V   G    +       GRVI+A G+P+DG   +   
Sbjct: 62  ALDAGIASCMPLDNLDGLRVGSPVRGTGLPATVPVGPALLGRVIDAAGRPLDGKGPIYAA 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + I    P A+ R R++     G+RV+D    L  GQRIG+FAGSG+GKSTL+SM A
Sbjct: 122 D-RVPIHGAAPNALERARIDMPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIA 180

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    +  +I+LVGERGREVREF+ +D   + L +SVVVVATSDESP+LRK A  TA  +
Sbjct: 181 RGTNAEVCVIALVGERGREVREFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRV 240

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEY+   G +VLL++DS+TR   + REI  + GE P  RGYP S FS + +LLER G   
Sbjct: 241 AEYYRDAGRHVLLMMDSLTRTCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAG--S 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++T + +VLVDGD+HN+PIAD  RSILDGH+VL+R LA  G YP +D L S+SR+A
Sbjct: 299 GAIGSVTGIYTVLVDGDDHNEPIADQARSILDGHVVLDRKLAVAGHYPAIDALGSISRVA 358

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K  + ++++  ++L  ++      +D+  +G Y+ G +  +D AV     I  FL Q  
Sbjct: 359 SKVTTREQREAATALRQIMGAKRSVQDLLDVGAYQAGTNPEVDTAVKYDAEIEAFLTQKT 418

Query: 422 SDLSSEDV 429
            +    D 
Sbjct: 419 DEKVEFDA 426


>gi|37525868|ref|NP_929212.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785297|emb|CAE14238.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 454

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 161/445 (36%), Positives = 238/445 (53%), Gaps = 17/445 (3%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----G 60
           L+T  Q     S   V + G ++  T +    T L  ++ LG   + + +N  N+     
Sbjct: 12  LDTFEQKLAKTSP--VRRYGRLTRATGLVMEATGL--HLPLGATCLIERQNGSNIEEVES 67

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-------WGRFRISPSACWCGRVINALGKPI 113
           +V+  N + + + P+   E I  G  V+         G  ++       GRV++  G+P+
Sbjct: 68  EVVGFNGEKLLLMPLEDLEGIVPGARVYARPYSEDCGGGRQLPLGPELLGRVLDGAGRPL 127

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG  S         + +     + R  +      G+R I+    +  GQR+G+FAGSG+G
Sbjct: 128 DGFPS-PDTSYRAPLTTPPINPLQRTPISDVLDVGVRAINALLTVGRGQRMGLFAGSGVG 186

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRK 232
           KS LL M AR    D +++ L+GERGREV++FIE+ LG   L +SVVV A +D SP+LR 
Sbjct: 187 KSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAAGLARSVVVAAPADISPLLRM 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
                A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP 
Sbjct: 247 QGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAKLPA 306

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP +D
Sbjct: 307 LVERAGNGVNGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAID 366

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR           + V      +  ++  RD+  +G Y  G D +LDKA+   P 
Sbjct: 367 IEASISRAMTALIDKQHYRRVQQFKQRLASYQRNRDLINVGAYAAGSDPLLDKAIELYPY 426

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL+Q   + S  D      ++L
Sbjct: 427 MAQFLQQDIEERSEYDAACIQLQQL 451


>gi|255323214|ref|ZP_05364349.1| flagellar protein export ATPase FliI [Campylobacter showae RM3277]
 gi|255299737|gb|EET79019.1| flagellar protein export ATPase FliI [Campylobacter showae RM3277]
          Length = 434

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 160/420 (38%), Positives = 239/420 (56%), Gaps = 7/420 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPV 75
           +L    G I  I++    ++ L     +GD V    + K+   L  V  +  +   I P 
Sbjct: 15  SLSSVFGVIERISATTIEISGLRP--SIGDIVQICAKDKSKSGLAMVTEVRQNTALISPF 72

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  E   +GD V+   +  +I       GRV++    P DG  ++   + +  IM     
Sbjct: 73  GFVEGYKIGDFVYQSDQGMKIPVGDALLGRVVDPFMNPKDGKGAIAATEYA-PIMRAPID 131

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
           AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  ++      +++L
Sbjct: 132 AMKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNSQAPIKVVAL 191

Query: 195 VGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           +GERGREV EFIE  L  +L  +VV+VATSD+SP++RK     A+++AEYF ++G +VL 
Sbjct: 192 IGERGREVPEFIEKNLRGDLSGTVVIVATSDDSPLMRKYGAFCAMSVAEYFKNQGKDVLF 251

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           I+DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E  KG+ITA  +VL
Sbjct: 252 IMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAGKEEG-KGSITAFFTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ +DPIAD  RSILDGHIVL+R + + G YPP++ L S SR+     + + +   +
Sbjct: 311 VDGDDMSDPIADQSRSILDGHIVLSREMTDFGIYPPINILNSASRVMSDIATKEHRANAA 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L  L    +E   +  IG Y+ G D  LD A+ +   I +FLKQ   +  S +  QE+ 
Sbjct: 371 KLKRLYSLLKENEVLLRIGAYQKGSDKELDLAISKKEFIDNFLKQDAEEGFSFEQTQELL 430


>gi|300717234|ref|YP_003742037.1| flagellum-specific ATP synthase [Erwinia billingiae Eb661]
 gi|299063070|emb|CAX60190.1| Flagellum-specific ATP synthase [Erwinia billingiae Eb661]
          Length = 452

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 160/445 (35%), Positives = 239/445 (53%), Gaps = 21/445 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M   L       E + + L     V + G ++  T +    T L   + LG   V +  +
Sbjct: 1   MTTRLSRWLGAMESFEQRLNQLPEVRRYGRLTRATGLVLEATGL--QLPLGATCVIERAD 58

Query: 56  SDNLGQV----IRINLDIVYICPVGIGEEISLGDLV-------FHWGRFRISPSACWCGR 104
           ++ + +V    +  N   +++ P+   E I  G  V        H G+ ++       GR
Sbjct: 59  NNGVAEVEAEVVGFNGQRLFLMPLEEVEGILPGARVYARLSGDKHSGK-QLMLGPELLGR 117

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++  G+P+DG  +   G     +++     + R  +     TG+R I+    +  GQR+
Sbjct: 118 VLDGSGRPLDGLPAPETG-YRAPLITPPFNPLQRTPITDVLDTGVRAINALLTVGRGQRM 176

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVAT 223
           G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++VV+ A 
Sbjct: 177 GLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGTEGRARAVVIAAP 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP
Sbjct: 237 ADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYP 296

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LA
Sbjct: 297 PSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLA 356

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E G YP +D  AS+SR+            V     L+  ++  RD+  +G Y  G D  L
Sbjct: 357 ESGHYPAIDIEASISRVMAHLIDEPHYARVRQFKQLLSSYQRNRDLVSVGAYAAGSDPTL 416

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSED 428
           DKA+   P +  FL+Q   + S+ D
Sbjct: 417 DKAIKLYPELETFLQQGMFERSTFD 441


>gi|164685320|gb|ABY66606.1| atp1 [Quercus subsericea]
          Length = 413

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGTLSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   VG+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRAASESETLYCVYVAVGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|148992606|ref|ZP_01822274.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP9-BS68]
 gi|148997430|ref|ZP_01825035.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP11-BS70]
 gi|149011744|ref|ZP_01832940.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP19-BS75]
 gi|149021776|ref|ZP_01835783.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP23-BS72]
 gi|168487557|ref|ZP_02712065.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1087-00]
 gi|168489670|ref|ZP_02713869.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae SP195]
 gi|168493411|ref|ZP_02717554.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|168575965|ref|ZP_02721880.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae MLV-016]
 gi|182684464|ref|YP_001836211.1| ATP synthase subunit A [Streptococcus pneumoniae CGSP14]
 gi|221232222|ref|YP_002511375.1| ATP synthase alpha chain [Streptococcus pneumoniae ATCC 700669]
 gi|225854954|ref|YP_002736466.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae JJA]
 gi|225859267|ref|YP_002740777.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae 70585]
 gi|303254152|ref|ZP_07340265.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae BS455]
 gi|303260732|ref|ZP_07346692.1| ATP synthase subunit A [Streptococcus pneumoniae SP-BS293]
 gi|303264463|ref|ZP_07350383.1| ATP synthase subunit A [Streptococcus pneumoniae BS397]
 gi|303267441|ref|ZP_07353295.1| ATP synthase subunit A [Streptococcus pneumoniae BS457]
 gi|303269784|ref|ZP_07355533.1| ATP synthase subunit A [Streptococcus pneumoniae BS458]
 gi|307068154|ref|YP_003877120.1| F0F1-type ATP synthase subunit alpha [Streptococcus pneumoniae
           AP200]
 gi|226739948|sp|B2IQX2|ATPA_STRPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808115|sp|B8ZLB1|ATPA_STRPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808117|sp|C1CF95|ATPA_STRZJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|259585436|sp|C1C8A1|ATPA_STRP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|147756485|gb|EDK63526.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP11-BS70]
 gi|147764175|gb|EDK71107.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP19-BS75]
 gi|147928623|gb|EDK79637.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP9-BS68]
 gi|147930012|gb|EDK80999.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP23-BS72]
 gi|182629798|gb|ACB90746.1| ATP synthase subunit A [Streptococcus pneumoniae CGSP14]
 gi|183569629|gb|EDT90157.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC1087-00]
 gi|183571966|gb|EDT92494.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae SP195]
 gi|183576573|gb|EDT97101.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           CDC3059-06]
 gi|183578224|gb|EDT98752.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae MLV-016]
 gi|220674683|emb|CAR69256.1| ATP synthase alpha chain [Streptococcus pneumoniae ATCC 700669]
 gi|225721676|gb|ACO17530.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae 70585]
 gi|225723044|gb|ACO18897.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae JJA]
 gi|302598878|gb|EFL65911.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae BS455]
 gi|302638135|gb|EFL68610.1| ATP synthase subunit A [Streptococcus pneumoniae SP-BS293]
 gi|302640677|gb|EFL71075.1| ATP synthase subunit A [Streptococcus pneumoniae BS458]
 gi|302643032|gb|EFL73325.1| ATP synthase subunit A [Streptococcus pneumoniae BS457]
 gi|302646275|gb|EFL76502.1| ATP synthase subunit A [Streptococcus pneumoniae BS397]
 gi|306409691|gb|ADM85118.1| F0F1-type ATP synthase, alpha subunit [Streptococcus pneumoniae
           AP200]
 gi|332072301|gb|EGI82784.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA17570]
 gi|332199553|gb|EGJ13628.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA41317]
          Length = 501

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 188/443 (42%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + V  G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENVMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 TGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|6561614|gb|AAF16958.1|AF197626_1 ATPase alpha subunit [Pinus sp. Qiu 94013]
          Length = 408

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 171/406 (42%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  G LV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVAFGSDTAIKEGSLVKRT 56

Query: 91  GRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G    +       GRV++ALG PIDG  +L +  L   + +K P  + R+ V +  +TG+
Sbjct: 57  GSIVSVPVGKAMLGRVVDALGVPIDGKGALSEHLLRR-VEAKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRMNSKSKADSEKLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     D L+ S+VV AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQIISEADALEYSIVVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D      +++   + + +KQ  
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVMKQPQ 398


>gi|319761164|ref|YP_004125101.1| ATP synthase f1, alpha subunit [Alicycliphilus denitrificans BC]
 gi|330823022|ref|YP_004386325.1| ATP synthase F1 subunit alpha [Alicycliphilus denitrificans K601]
 gi|317115725|gb|ADU98213.1| ATP synthase F1, alpha subunit [Alicycliphilus denitrificans BC]
 gi|329308394|gb|AEB82809.1| ATP synthase F1, alpha subunit [Alicycliphilus denitrificans K601]
          Length = 519

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 103/445 (23%), Positives = 187/445 (42%), Gaps = 29/445 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK- 54
           MQ N   +++L +   + L     +   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPAEISELIKSRIEGLAASSDIRNQGTVVSVTDGIVRIHGLSD-VMQGEMLEFPADA 59

Query: 55  -NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKP 112
               + G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+P
Sbjct: 60  DGQPSYGLALNLERDSVGAVILGAYEHISEGDTVKCTGRILEVPVGPELIGRVVNALGQP 119

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +    ++  I    P  + RQ V++   TG + ID   P+  GQR  +      
Sbjct: 120 IDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPLATGQKSIDSMVPVGRGQRELIIGDRQT 178

Query: 173 GKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ +   ++ A+       I   +G++   ++  +           ++VV A++ ES  
Sbjct: 179 GKTAVAIDAIIAQKGQGVTCIYVAIGQKASSIKNVVRSLEQAGAMDYTIVVAASASESAA 238

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ ++  +  T+ EYF  +G + L++ D +++ A + R+++      P    +P  VF  
Sbjct: 239 MQYVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYL 298

Query: 290 LPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
             RLLER                   + G++TA+  +     + +  +  +V SI DG I
Sbjct: 299 HSRLLERAARVNADYVEAFTKGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQI 358

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     + 
Sbjct: 359 FLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKGLSGGIRTDLAQYRE---LAAFAQFA 415

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSP 421
             +D    K + +   + + LKQ  
Sbjct: 416 SDLDEATRKQLDRGARVTELLKQPQ 440


>gi|52080226|ref|YP_079017.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580]
 gi|52785603|ref|YP_091432.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580]
 gi|319645995|ref|ZP_08000225.1| FliI protein [Bacillus sp. BT1B_CT2]
 gi|52003437|gb|AAU23379.1| flagellar-specific ATP synthase [Bacillus licheniformis ATCC 14580]
 gi|52348105|gb|AAU40739.1| FliI [Bacillus licheniformis ATCC 14580]
 gi|317391745|gb|EFV72542.1| FliI protein [Bacillus sp. BT1B_CT2]
          Length = 437

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 162/439 (36%), Positives = 240/439 (54%), Gaps = 12/439 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN---SDNLG 60
            L+ L +  E        + G +    +V   +        +GD      K         
Sbjct: 1   MLKQLLECIETADS--YKRYGKVKQ--AVGLMIESKGPECSIGDVCKIYTKGDGPKAIKA 56

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+      + + P      I+ G +V   G   R+   +   G+V++A G P+DG   L
Sbjct: 57  EVVGFKDQNILLMPYLEAANIAPGSIVEATGESLRVKVGSGLIGQVVDAFGNPLDGS-VL 115

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG   +      P  M R  + +    G+R ID    +  GQR+G+FAGSG+GKSTL+ 
Sbjct: 116 PKGLAQVSTDQAPPNPMKRPPIREKMAVGVRSIDSLLTVGKGQRVGIFAGSGVGKSTLMG 175

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +I+LVGERGREVREFI +D   + LK+++VVVATSD+  ++R  A  TA
Sbjct: 176 MIARETAADLNVIALVGERGREVREFIEKDLGEEGLKRTIVVVATSDQPALMRLKAAYTA 235

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G
Sbjct: 236 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFAILPKLLERTG 295

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G+ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S
Sbjct: 296 TTES--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSIS 353

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+       D  +  +    ++  ++ + D+  IG Y+ G    +D+A+   P +  FLK
Sbjct: 354 RVMSNIAEKDHIRAANRFREMLSTYQNSEDLINIGAYKKGSSREIDEAIQFHPKLISFLK 413

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   + +S +    + K L
Sbjct: 414 QEVDEAASLEESISLLKSL 432


>gi|117620954|ref|YP_855907.1| flagellum-specific ATP synthase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562361|gb|ABK39309.1| flagellar protein export ATPase FliI [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 443

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 149/415 (35%), Positives = 232/415 (55%), Gaps = 5/415 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +     T+  +     +G       ++     +V+  + D +++ P    + +  
Sbjct: 25  GKLTRVVG--LTLEAIGCRAAIGALCRIDTQDGSLEAEVVGFSGDRLFLMPSEQLKGVIP 82

Query: 84  GDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V        I       GRVI+ +G+P+DG   +           ++ P ++R+ + 
Sbjct: 83  GARVVPITEEHGIPVGMNLLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIH 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV
Sbjct: 142 QPMDVGVRAINAVLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREV 201

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           +EFIE+ LG+    +SVVV A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR
Sbjct: 202 KEFIEEILGEEGRARSVVVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA   GE P  +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  
Sbjct: 262 YAQAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQ 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+     S +  +L  +L     
Sbjct: 322 DPIADAARAILDGHIVLSRELADAGHYPAIDIEKSISRVMPMVTSPEHMELARTLKQFYS 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
            +++ RD+  IG Y  G D  +D+A+ Q P +  FL+Q   ++   D   +  + 
Sbjct: 382 LYQQNRDLITIGAYSQGSDPRIDRAIIQKPYLDQFLQQGMREVIHYDAGLQALQL 436


>gi|6066711|emb|CAB58257.1| HrpE protein [Ralstonia solanacearum]
 gi|1097290|prf||2113360R hrpE gene
          Length = 439

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 235/437 (53%), Gaps = 11/437 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQV 62
           L++L   A   +  L+ + G +  ++     V  +   V LG+       +   +  G+V
Sbjct: 7   LDSLESAA--RTTPLIRRFGKVVEVSGTLLRVGGVD--VRLGELCTLTEADGTVMQEGEV 62

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  +     + P      +S    V   GR   +       GRV++  G+P DG   L  
Sbjct: 63  VGFSEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGHGRPADGGPPLDV 122

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            +  + + +  P  M R+ VE    TG+RVID    L  GQR+G+FA +G+GKSTL+ MF
Sbjct: 123 VEY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLMGMF 181

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D  +I L+GERGREVREFI +    + +++SVVV ATSD + + R  A      
Sbjct: 182 ARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRTAVERAKAAYVGTA 241

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G S
Sbjct: 242 VAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGMS 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA  +VL + ++ NDP+A+ VR ILDGH++L+R +A   RYP +D L S+SR+
Sbjct: 302 A--AGSITAHYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSLSRV 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    D       +  L+ ++ E   +  +G Y+ G D + D AV     +  FL+Q 
Sbjct: 360 MTQVMPRDHCDAAGRMRQLLAKYNEVVTLLQMGEYKEGSDPVADAAVQWNDWMESFLRQR 419

Query: 421 PSDLSSEDVFQEITKKL 437
             +  S D  + +  ++
Sbjct: 420 TDEWCSPDETRRLLDEI 436


>gi|307257730|ref|ZP_07539487.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863636|gb|EFM95562.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 513

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGSYADLAEGMSVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|197120196|ref|YP_002140623.1| flagellum-specific ATPase FliI [Geobacter bemidjiensis Bem]
 gi|197089556|gb|ACH40827.1| flagellum-specific ATPase FliI [Geobacter bemidjiensis Bem]
          Length = 434

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 155/422 (36%), Positives = 232/422 (54%), Gaps = 11/422 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++ +  +   +        +G       +    +  +V+    +   + P+G  
Sbjct: 17  VRFHGKVTQVVGLV--IEGYCPETAVGSVCEVHSEGHAPIPAEVVGFRENKTLLMPLGEL 74

Query: 79  EEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             + LG ++     +  +       GRVI+ LG+PID    +   D    I +     M 
Sbjct: 75  RGVGLGSVISVRREKAALGVGPALLGRVIDGLGQPIDDKGPIEVAD-EYPIYALPVNPMK 133

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + K    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+GE
Sbjct: 134 RRPIRKPLNLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGE 193

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE+REFI +D   + L+KSVVVVATSD+ P++R      A TIAEYF ++G  VLL++
Sbjct: 194 RGRELREFIEKDLQKEGLRKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLMM 253

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS TRFA ++RE+    GE P  +GY  SVF+ LPRLLER G    + G+IT + +VLV+
Sbjct: 254 DSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPRLLERTGNF--QGGSITGLYTVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI+D++RSILDGHI+L R LA    YPP+D + S SR+     + + K L    
Sbjct: 312 GDDFNEPISDAMRSILDGHIILTRELAARNIYPPIDLMNSASRVMSDVATKEHKALAGRF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  + +  D+  IG Y+ G +  +D AV ++  +  +LKQ   D+  E  F+E    
Sbjct: 372 KELLATYRQAEDMINIGAYKSGSNPKIDYAVAKMEQMIGYLKQ---DVGDEVNFEESIAA 428

Query: 437 LQ 438
           L+
Sbjct: 429 LE 430


>gi|332285688|ref|YP_004417599.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
 gi|330429641|gb|AEC20975.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
          Length = 513

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 185/446 (41%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASTDVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +       GRV++ALG PID
Sbjct: 58  -NVFGLALNLERDSVGAVILGDYTGVSEGDSVKTTGRILEVPVGPELRGRVVDALGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINAKATDI-IEKVAPGVIARQSVTQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +         + +++V A + +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTISNVVRKLEEHGALEYTIIVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +  T+ EYF  +G++ L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLSAYSGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNPDYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGSAQTKVVKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|253988533|ref|YP_003039889.1| type III secretion system ATPase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211637885|emb|CAR66514.1| type iii secretion component protein sctn [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779983|emb|CAQ83144.1| type iii secretion component protein sctn [Photorhabdus
           asymbiotica]
          Length = 441

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 159/427 (37%), Positives = 237/427 (55%), Gaps = 13/427 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPV 75
            L+   G ++ +T        +   V +G+    +  ++    L +VI        + P+
Sbjct: 20  RLIQIRGRVTQVTGTLLK--AVIPGVRIGELCHLRNPDNTLSLLAEVIGFQQHQALLTPL 77

Query: 76  GIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    IS    V   G   ++       G++++ LG P  G   L +      +    P 
Sbjct: 78  GEMFGISSNTEVSPTGAMHQVGVGDYLLGQILDGLGNPFSG-GQLPEPQAWYPVYRDAPA 136

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            M+R+R+E     G+R ID       GQR+G+FA +G GKSTLLS   R+   D  +++L
Sbjct: 137 PMSRKRIEHPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLSTLIRNAEVDVTVLAL 196

Query: 195 VGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREVREFIE D   + LK+SV+VVATSD   + R  A   A +IAEYF  +G  VL
Sbjct: 197 IGERGREVREFIESDLGEEGLKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVL 256

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G S+K  G+ITA+ +V
Sbjct: 257 LLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDK--GSITALYTV 314

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+  +  + + +   
Sbjct: 315 LVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMSQIITPEHQAQA 374

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS----SEDV 429
           + L H + ++EE   +  IG Y+ G D + D A+  +  I  +L+Q   + S    +  +
Sbjct: 375 NLLRHWLAKYEEVELLLQIGEYQKGQDPVADNAIAHIEAIRGWLRQGTHEPSDLPQTLVL 434

Query: 430 FQEITKK 436
            Q+ITK+
Sbjct: 435 LQQITKQ 441


>gi|903732|gb|AAA75456.1| F1 ATPase alpha subunit [Helianthus annuus]
          Length = 510

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 173/439 (39%), Gaps = 28/439 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G  V      S 
Sbjct: 5   PRAAELTTLLESRISNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGGMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATS 224
           +      +                 +   +G++   V + ++     N    S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRSTSESETLYCVYLAIGQKRSTVAQLVQILSEANAMEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P   G+P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGRDGFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VAALAQFGSDLDAA 416

Query: 403 LDKAVHQVPIIYDFLKQSP 421
               +++   + +  +Q  
Sbjct: 417 TQALLNRGARLTEVPRQPQ 435


>gi|300772160|ref|ZP_07082030.1| ATP synthase F1 sector alpha subunit [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300760463|gb|EFK57289.1| ATP synthase F1 sector alpha subunit [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 524

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 105/451 (23%), Positives = 173/451 (38%), Gaps = 42/451 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ L      AE      + + G + +I      +  L++ V  G+ V          G
Sbjct: 13  LREQLSGFKSEAE------LEEVGTVLTIGDGIARIYGLTK-VQSGELVEFDNG---LQG 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V +  +G  E++  GD V    R   I       GRV+N LG+PIDG   +
Sbjct: 63  IVMNLEEDNVGVVLLGSSEDVKEGDTVKRTDRIASIQVGEGLLGRVVNTLGQPIDGKGPV 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M I  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+ +  
Sbjct: 123 VGETYEMPIERKAPGVIYRQPVTEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTAVCI 182

Query: 180 MFARSDCFDK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
               +             I   VG++   V   +           +V+V A++ +   ++
Sbjct: 183 DTILNQKEFYDAGQPVFCIYVAVGQKNSTVANIVRVLEERGAMAYTVIVNASAADPAPMQ 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP+    I E+F   G   L++ D +++ A + RE++      P    YP  VF    
Sbjct: 243 FYAPMAGAAIGEFFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHS 302

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 303 RLLERAAKINSSDEIARNMNDLPASIKHLVKGGGSLTALPIIETQAGDVSAYIPTNVISI 362

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L  +L   G  P ++   SVSR+   A     KK+  +L     ++ E      
Sbjct: 363 TDGQIFLESNLFNAGIRPAINVGISVSRVGGNAQIKPMKKVSGTLKLDQAQYRELE---A 419

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              +   +D      + +     + LKQ   
Sbjct: 420 FAKFGSDLDAATKAVIDKGVRNVEILKQGQF 450


>gi|313676661|ref|YP_004054657.1| ATP synthase f1, alpha subunit [Marivirga tractuosa DSM 4126]
 gi|312943359|gb|ADR22549.1| ATP synthase F1, alpha subunit [Marivirga tractuosa DSM 4126]
          Length = 524

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 99/450 (22%), Positives = 170/450 (37%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ L      AE      + + G +  +      +  L+Q    G+ +  +        
Sbjct: 13  LREQLSGFKTEAE------LEEVGTVLQVGDGVARIYGLTQAQS-GELLEFENG---LQA 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V     G  + I  GD V   G+   I       GRV++ LG+PIDG   +
Sbjct: 63  LVLNLEEDNVGAVLFGSSQGIKEGDAVKRTGKIASIKVGDGIAGRVVDTLGQPIDGKGPI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M +  K P  + R+ V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 123 EGELFDMPLERKAPGVIFREPVSEPLQTGIKSIDAMIPVGRGQRELIIGDRQTGKTAVAI 182

Query: 180 MFARSDCF-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
               +             I   +G++   V + + +         + +V A++ +   L+
Sbjct: 183 DAIINQKEFYDAGEPVYCIYVAIGQKASTVAQIVAELEKAGAMAYTTIVSASASDPAPLQ 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G   L++ D +++ A + RE++      P    YP  VF    
Sbjct: 243 FFAPFAGAAIGEYFRDTGRPGLVVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHS 302

Query: 292 RLLERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER      +                     G++TA+  +     + +  I  +V SI
Sbjct: 303 RLLERAAKVINDDTIAQDMNDLPPSLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISI 362

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L  +L   G  P ++   SVSR+   A     KK+  +L     +F E      
Sbjct: 363 TDGQIFLETNLFNSGIRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQFRELE---A 419

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +   +D    K + +     + LKQ  
Sbjct: 420 FSKFGSDLDPATKKVIERGKRNQEILKQGQ 449


>gi|88800457|ref|ZP_01116021.1| flagellum-specific ATP synthase [Reinekea sp. MED297]
 gi|88776787|gb|EAR07998.1| flagellum-specific ATP synthase [Reinekea sp. MED297]
          Length = 486

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 159/417 (38%), Positives = 232/417 (55%), Gaps = 8/417 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +  +      L+    +G        +     +V+  + D  ++ PV     +  
Sbjct: 27  GRLTRMVGLTLEAVGLN--ASIGQRCQVVDHHQRVEAEVVGFHDDKTFLMPVQAIHNLRA 84

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V        +       GRV+N  G+PIDG  +L        +  +    ++R+ + 
Sbjct: 85  GARVVPLEVANELVIGDELLGRVVNGFGEPIDGKGALL-CRAQQSLNGEYINPLHREPIR 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D  I+ L+GERGREV
Sbjct: 144 QPLDVGIRAINSLLTVGRGQRLGLFAGSGVGKSVLLGMMTRFTDADITIVGLIGERGREV 203

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           +EFIE+ LGD  L +SVVV + +D++P+LR  A      IAEYF S+G  VLL++DS+TR
Sbjct: 204 KEFIEEILGDEGLARSVVVASPADDAPLLRLRAAQYTTAIAEYFRSQGKTVLLLMDSLTR 263

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+ITA  +VL +GD+  
Sbjct: 264 YAQAQREIALAIGEPPATKGYPPSVFARLPQLVERAGNAEKGGGSITAFYTVLTEGDDQQ 323

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIADS R+ILDGH VLNR LAEEG YP +D   S+SR+  +  S D  K   +   L  
Sbjct: 324 DPIADSSRAILDGHFVLNRKLAEEGHYPAIDIEQSISRVMPQVVSEDHLKAAQATKQLWS 383

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            + + RD+  IG Y  G +  +D+A+   PII DFL+Q   +   +  +Q+    L+
Sbjct: 384 TYSQNRDLISIGAYTKGSNQEIDQAIALQPIIRDFLRQGLKE---QVPYQQSVDLLK 437


>gi|15901357|ref|NP_345961.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae TIGR4]
 gi|15903405|ref|NP_358955.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae R6]
 gi|111657412|ref|ZP_01408165.1| hypothetical protein SpneT_02001382 [Streptococcus pneumoniae
           TIGR4]
 gi|148984853|ref|ZP_01818106.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP3-BS71]
 gi|225861343|ref|YP_002742852.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230575|ref|ZP_06964256.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255870|ref|ZP_06979456.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298503245|ref|YP_003725185.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           TCH8431/19A]
 gi|81620385|sp|Q97PT4|ATPA_STRPN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81706932|sp|Q7CRB1|ATPA_STRR6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808119|sp|C1CSD0|ATPA_STRZT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|18253299|gb|AAL66411.1|AF368465_1 proton-translocating ATPase alpha subunit [Streptococcus
           pneumoniae]
 gi|14973000|gb|AAK75601.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae TIGR4]
 gi|15459010|gb|AAL00166.1| Proton-translocating ATPase, F1 sector, alpha-subunit
           [Streptococcus pneumoniae R6]
 gi|147922875|gb|EDK73991.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP3-BS71]
 gi|225726392|gb|ACO22243.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238840|gb|ADI69971.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301800346|emb|CBW32975.1| ATP synthase alpha chain [Streptococcus pneumoniae OXC141]
 gi|327389693|gb|EGE88038.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA04375]
          Length = 501

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 187/443 (42%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + V  G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENVMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|228016933|gb|ACP51757.1| ATP synthase CF1 alpha subunit [Pinus banksiana]
          Length = 507

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGKXXXSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|190150979|ref|YP_001969504.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307264336|ref|ZP_07545924.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|226739837|sp|B3H2P5|ATPA_ACTP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189916110|gb|ACE62362.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|306870288|gb|EFN02044.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 513

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMSVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVESFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|170682099|ref|YP_001742360.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           SMS-3-5]
 gi|170519817|gb|ACB17995.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           SMS-3-5]
          Length = 445

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 230/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     ++A +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSVAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|261867030|ref|YP_003254952.1| F0F1 ATP synthase subunit alpha [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412362|gb|ACX81733.1| F0F1 ATP synthase subunit alpha [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 513

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V+      G I S++     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVESEARNTGTIVSVSDGIIRIHGLSE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPIEVIAPGVIERKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDTIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|170021371|ref|YP_001726325.1| FliI/YscN family ATPase [Escherichia coli ATCC 8739]
 gi|188494378|ref|ZP_03001648.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           53638]
 gi|256020217|ref|ZP_05434082.1| FliI/YscN family ATPase [Shigella sp. D9]
 gi|300817283|ref|ZP_07097501.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|300936113|ref|ZP_07151053.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
 gi|332281379|ref|ZP_08393792.1| lateral flagellar export/assembly protein [Shigella sp. D9]
 gi|169756299|gb|ACA78998.1| ATPase, FliI/YscN family [Escherichia coli ATCC 8739]
 gi|188489577|gb|EDU64680.1| lateral flagellar export/assembly protein LfiI [Escherichia coli
           53638]
 gi|300458733|gb|EFK22226.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
 gi|300530259|gb|EFK51321.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|323171050|gb|EFZ56699.1| flagellum-specific ATP synthase [Escherichia coli LT-68]
 gi|332103731|gb|EGJ07077.1| lateral flagellar export/assembly protein [Shigella sp. D9]
          Length = 445

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 230/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|167743337|ref|ZP_02416111.1| type III secretion system ATPase [Burkholderia pseudomallei 14]
          Length = 434

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 165/436 (37%), Positives = 241/436 (55%), Gaps = 14/436 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E   G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--HGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDV 429
             FL Q   + S  D 
Sbjct: 417 RAFLNQRTDEYSPPDA 432


>gi|55824780|gb|AAV66472.1| F1-ATPase alpha subunit [Sambucus sieboldiana]
          Length = 424

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 92/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVAFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|123444375|ref|YP_001008340.1| F0F1 ATP synthase subunit alpha [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|158512902|sp|A1JTC8|ATPA_YERE8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122091336|emb|CAL14222.1| ATP synthase alpha subunit protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318608059|emb|CBY29557.1| ATP synthase alpha chain [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 513

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+P+D
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|12659387|gb|AAG60228.1| ATPase alpha subunit [Tetracentron sinense]
          Length = 413

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|260767703|ref|ZP_05876638.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
 gi|260617212|gb|EEX42396.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
 gi|315179465|gb|ADT86379.1| flagellum-specific ATP synthase FliI [Vibrio furnissii NCTC 11218]
          Length = 440

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 152/437 (34%), Positives = 238/437 (54%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    + LAQ   +   +  V  G +  +  +    T       +G     Q  + +   
Sbjct: 1   MLALADRLAQYKTEGLTSRPVASGKLIRVVGLTLEATG--CRAPIGSLCKVQTMSGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      +  G  V        +S      GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDSLFLMPSEQITGVLPGAKVTPLTEEAGLSVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      ++    + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQRASFNAQPINPLARKPISEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  ++SVVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+
Sbjct: 358 RVMPQITTDEHVLMSKAVRQILSICRKNQDLVSIGAYKPGTDQAIDSAFTLKPKLDNYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q   D    ++   + K
Sbjct: 418 QGMKDSVPYEMCVSMLK 434


>gi|331645405|ref|ZP_08346509.1| flagellar protein export ATPase FliI [Escherichia coli M605]
 gi|331045567|gb|EGI17693.1| flagellar protein export ATPase FliI [Escherichia coli M605]
          Length = 446

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 229/425 (53%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQAKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++    + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTRLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|260778617|ref|ZP_05887509.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604781|gb|EEX31076.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 439

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 173/420 (41%), Positives = 240/420 (57%), Gaps = 15/420 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G I  +TS     T        G+  +     +D   +V+ I  +  ++ P      
Sbjct: 28  RRFGKILEVTSTLIRSTL--PGARQGELCMI---GNDLKAEVVAIKGEEAWLSPFRSTTG 82

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I     V   G   R+       GRV++ LG P+D  + +GK     E   + P  + R+
Sbjct: 83  IGTDMNVEPMGHGHRVMVGEELLGRVVDGLGHPMDESNWVGK---WRENHGEAPDPLKRK 139

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            + K   TGIR ID    L  GQR+G+FA +G GKSTLL M A     D ++++LVGERG
Sbjct: 140 LISKIMPTGIRAIDSTLALGVGQRVGIFAAAGGGKSTLLGMLAGHCEADVIVLALVGERG 199

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFI         +K+V+VVATSD+ P+ R  A +TA TIAEYF  +G NVLL++DS
Sbjct: 200 REVREFIEYCLPPAAKEKTVLVVATSDKPPLERMKAAVTATTIAEYFRDQGKNVLLMVDS 259

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE PVA G+P SVF +L  LLER GP+    G+ITA+ +VLV+GD
Sbjct: 260 LTRFARAGREIGLAAGEPPVANGFPPSVFVQLASLLERAGPAPV--GSITAIYTVLVEGD 317

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           N N+P+AD VRSILDGHIVL+R LA  G YP +D  ASVSR+ D+  +A  K     L H
Sbjct: 318 NMNEPVADEVRSILDGHIVLSRKLAGAGHYPAIDVNASVSRVMDQIVTAQHKDDAKHLRH 377

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           L+  ++E + +  +G Y+PG D   D+AV +   I  FL Q  ++ S    F+E  ++L 
Sbjct: 378 LLSLYQEVQLLIRVGEYQPGQDPATDEAVAKFDSIERFLCQRANEPS---PFKETLQQLN 434


>gi|126443725|ref|YP_001063282.1| type III secretion system ATPase [Burkholderia pseudomallei 668]
 gi|126223216|gb|ABN86721.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 668]
          Length = 442

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 244/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +G +  
Sbjct: 2   NALADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E  +G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--QGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQIATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|323148815|ref|YP_004221908.1| ATP synthase CF1 alpha subunit [Erodium carvifolium]
 gi|316926279|gb|ADU58132.1| ATP synthase CF1 alpha subunit [Erodium carvifolium]
          Length = 504

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 187/424 (44%), Gaps = 15/424 (3%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  + Y++ + +V  G +  +      +  L++ V  G+ V  +   +   G  + + 
Sbjct: 13  IRERIKQYNREVNIVNMGTVLKVGDGIARIYGLNE-VMAGELVEFEEGTT---GIALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG  ++   +  
Sbjct: 69  SNNVGVVLMGGGVMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGAISASEFR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    + 
Sbjct: 129 L-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + +  +  +     ++VV  T+     L+ +AP T   +A
Sbjct: 188 RGKDVICVYVAIGQKASSVAQVVTTFQEEGAMEYTIVVAETAASPATLQYLAPYTGAALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F  +  + L+I D +++ A + R+++      P    YP  VF    RLLER   S  
Sbjct: 248 EFFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKSSS 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+
Sbjct: 308 NLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++       + +F E         +   +D      + +   + + LKQS
Sbjct: 368 GSAAQIKAMKQVAGKSKLDLAQFTELE---AFAQFASDLDKTTQNQLARGRRLRELLKQS 424

Query: 421 PSDL 424
            ++ 
Sbjct: 425 QAEP 428


>gi|171060198|ref|YP_001792547.1| ATP synthase F1 subunit alpha [Leptothrix cholodnii SP-6]
 gi|226739905|sp|B1Y3S9|ATPA_LEPCP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|170777643|gb|ACB35782.1| ATP synthase F1, alpha subunit [Leptothrix cholodnii SP-6]
          Length = 512

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 103/448 (22%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     V  LS     G+ +   G  
Sbjct: 1   MQLNPAEISELIKSRIEGLGAATDVRNQGTVVSVTDGIVRVHGLSD-AMAGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E IS GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -NVFGLALNLERDSVGAVILGEYEGISEGDTVRCTGRILEVPVGPELIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    ++  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIN-AKMTDVIEKVAPGVIARKSVDQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   ++  +           ++VV A++ ES  ++
Sbjct: 176 TAVAIDAIINQKGQNMTCVYVAIGQKASSIKNVVRALEQAGAMEYTIVVAASASESAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  T  T+ EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YISAYTGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ETSLFNAGIRPAINAGISVSRVGGAAQTKLIKGLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +   + + LKQ+      
Sbjct: 413 LDASTRKQLDRGARVTELLKQAQYSPQP 440


>gi|149003276|ref|ZP_01828172.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP14-BS69]
 gi|237649215|ref|ZP_04523467.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae CCRI
           1974]
 gi|237821824|ref|ZP_04597669.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147758736|gb|EDK65733.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP14-BS69]
          Length = 501

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 184/428 (42%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + V  G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENVMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQPVH 425


>gi|6561639|gb|AAF16983.1|AF197651_1 ATPase alpha subunit [Sanguinaria canadensis]
          Length = 420

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLTE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|56460305|ref|YP_155586.1| flagellum-specific ATP synthase [Idiomarina loihiensis L2TR]
 gi|56179315|gb|AAV82037.1| type III secretory pathway ATPase [Idiomarina loihiensis L2TR]
          Length = 449

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 155/435 (35%), Positives = 242/435 (55%), Gaps = 6/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           ++ L +  E   K  V   GY++ +  + +    +     +G  V  +  + D   +V+ 
Sbjct: 8   VKQLRKKRERIQKPSVAVSGYLTRVVGLMF--EAVGCRAPVGSSVAVEADSGDIEAEVVG 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
              +I Y+ P      +  G  V    R  ++       GRVI+A G+P+D    +    
Sbjct: 66  FEGNISYLMPTEDAHGVIPGARVRPLNRKNQLPLGMELLGRVIDARGEPLDDKGPIFSDG 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +    SK    +NR++V++    G+  I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 126 KTYR--SKPMNPLNRRQVKQPLDVGVTAINACLTVGQGQRMGLFAGSGVGKSVLLGMMTR 183

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D +++ L+GERGREV+EFIE+ LG+   +K+VV+ A +D+SP++R     TA  +A
Sbjct: 184 GTTADVIVVGLIGERGREVKEFIEEILGEEGREKAVVIAAPADQSPLIRLRGCETASQVA 243

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G    
Sbjct: 244 EYFRDQGLNVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGGD 303

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G++TA  +VL +GD+  DPIADS R+ILDGHIVLNR LA+ G YP +D  AS+SR+  
Sbjct: 304 GQGSVTAFYTVLTEGDDLQDPIADSARAILDGHIVLNRELADSGHYPAIDIEASISRVMP 363

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +  S +  +    +      +   RD+  IG Y  G D  +D+A+   P +  FL+Q   
Sbjct: 364 QVVSEEHMQQAIKVRQWYSSYRRNRDLISIGAYTRGSDPAIDQAIAMQPRVSMFLQQKMR 423

Query: 423 DLSSEDVFQEITKKL 437
           ++ + D    +  +L
Sbjct: 424 EVVNYDESLLLLNQL 438


>gi|116619484|ref|YP_821640.1| FliI/YscN family ATPase [Candidatus Solibacter usitatus Ellin6076]
 gi|116222646|gb|ABJ81355.1| ATPase, FliI/YscN family [Candidatus Solibacter usitatus Ellin6076]
          Length = 449

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 151/424 (35%), Positives = 230/424 (54%), Gaps = 11/424 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           N +   G ++ +  +   +      V +GDF   +  +   +  QVI      V   P+ 
Sbjct: 16  NPLRWTGQVTQVVGLL--IESRGPSVAIGDFCEVKTASGRRIHTQVIGFRDGRVLSMPLE 73

Query: 77  IGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + + LGD L       R+       GRVI+  GKP+D   ++   + S  +       
Sbjct: 74  EIDGLQLGDPLAARSEDARVEVGPGLLGRVIDGFGKPMDTGPAINARE-SYSLHGTPTNP 132

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++RQ + +   TGIR ID   P   GQRIG+F GSG+GKSTLL   +R++  D  +I+++
Sbjct: 133 LDRQHITQPLVTGIRAIDALLPCGKGQRIGIFGGSGVGKSTLLGSMSRNNSADVTVIAMI 192

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER REVR F+  +   +  K+SVVV ATS+    LR  A   ++ IAEYF  +G NVLL
Sbjct: 193 GERNREVRGFLENELGPEGRKRSVVVCATSERPAPLRVRACFVSLAIAEYFRDQGANVLL 252

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR A + REI   +GE P  +GY  SVF+ LP++LER G     +G+IT   +VL
Sbjct: 253 VMDSVTRLAMAQREIGLAAGEPPSQKGYTPSVFNLLPKVLERAGNF--GRGSITGFFTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ N+PI D+VR ILDGH +L+R L  +G YP +D L SVSRL     +  +K+   
Sbjct: 311 VEGDDFNEPICDAVRGILDGHFILSRDLGAQGHYPAIDILHSVSRLTSAIATPAQKEAAR 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + +  D+  +G Y  G +  LD ++H  P + DFL+Q   D       +E  
Sbjct: 371 KIRAALAAYRDAEDLIQLGAYVSGSNPDLDASIHLRPELLDFLRQ---DHLVVSTLEETL 427

Query: 435 KKLQ 438
           ++L+
Sbjct: 428 RRLE 431


>gi|34539269|gb|AAQ74518.1| F1-ATPase alpha subunit [Cyclanthus bipartitus]
          Length = 416

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIMDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 SLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|30352019|ref|NP_848045.1| ATP synthase CF1 alpha subunit [Adiantum capillus-veneris]
          Length = 507

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 179/424 (42%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y   + VV  G +  +      +  L + V  G+ V  +      +G    
Sbjct: 12  SIIRKQIKGYVPEMKVVNIGTVLQVGDGIARIHGLDE-VMAGELVESEDG---TVGIASN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
              D V     G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 68  PESDNVGAVLTGDGLTIREGGSVRATGKIAQIPVSDSFLGRVVNALAQPIDGKGQIPASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 128 FR-SIESSAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIP 186

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G++   V + ++ +      + ++VV  T++    L+ +AP T   
Sbjct: 187 NQKGQNVICVYVAIGQKASSVAQVVDTFRERGALEYTIVVSETANSPATLQYLAPYTGAA 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 247 LAEYFMYRKQHTLIIYDDLSKQAQAYRQMSLLLKRPPGREAYPGDVFHLHSRLLERAAKL 306

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG   L+  L   G  P ++   SVS
Sbjct: 307 STQLGEGSMTALPIVETQAGDVSAYIPTNVISITDGXTFLSADLFNAGIRPAINVGISVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +  E         +   +D      + +   + + LK
Sbjct: 367 RVGSAAQIKAMKQVAGKLKLELAQSAELE---AFAQFASDLDKTTQNQLARGQRLRELLK 423

Query: 419 QSPS 422
           QS S
Sbjct: 424 QSQS 427


>gi|50261318|ref|YP_052891.1| ATP synthase F1 subunit alpha [Saprolegnia ferax]
 gi|48237631|gb|AAT40680.1| ATP synthase F1 subunit alpha [Saprolegnia ferax]
          Length = 509

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 101/415 (24%), Positives = 178/415 (42%), Gaps = 21/415 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S++        L++ +  G+ V       +  G  + +  D+V +       EI
Sbjct: 24  ETGIVLSMSDGIARCYGLTK-IQAGEMVEF--NKGNIKGMALNLEPDVVGVVVFSNEREI 80

Query: 82  SLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G+ V   G     P      GRV++ALG+PIDG  ++    LS  +  K P  M RQ 
Sbjct: 81  QEGNFVKRTGSIVSVPTGEGLLGRVVDALGQPIDGKGAIKSNTLSR-VEIKAPGIMPRQS 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----------V 190
           V +  +TG++ +D   P+  GQR  +      GK+++      +                
Sbjct: 140 VSEPVQTGLKAVDSLIPIGRGQRELIIGDRQTGKTSIAMDTIINQVKAHQSGDKDNQLFC 199

Query: 191 IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V +  +     N    S++V AT+ +S  L+ +AP T  T+ EYF   G
Sbjct: 200 IYVAVGQKRSTVADLTKTLEEKNALFFSIIVAATASDSAPLQFLAPYTGCTLGEYFRDNG 259

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + ++  D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 260 KHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNIAIGGGSL 319

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G+ P +    SVSR+   A   
Sbjct: 320 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFNQGQRPAISVGLSVSRVGSSAQIK 379

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             K++  S+   + +F E +       +   +D    + +H+   + + LKQ  +
Sbjct: 380 AMKQIAGSMKLELAQFREVQ---AFSQFGSDLDAATQQQLHRGVRLTEMLKQGLN 431


>gi|71281978|ref|YP_268247.1| flagellum-specific ATP synthase [Colwellia psychrerythraea 34H]
 gi|71147718|gb|AAZ28191.1| flagellum-specific ATP synthase FliI [Colwellia psychrerythraea
           34H]
          Length = 449

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 164/440 (37%), Positives = 255/440 (57%), Gaps = 11/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + + L+   Q   D+   +    G +  +     T+  +     +G   + +  + D L 
Sbjct: 7   LTERLKNNQQFIHDFKAPVA---GRLVRVVG--LTLEAVGVKAHVGSQCLVETAHGDLLA 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    DI Y+ P      +  G  V     + ++  S    GRVIN +GKP+D    +
Sbjct: 62  EVVGFAQDITYLMPEESLRGVMPGARVLPISSKAKVPLSMGLLGRVINGVGKPLDSKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K D      SK    ++R+ + +    G+R I+ F  +  GQR+G+FAGSG+GKS L+ 
Sbjct: 122 -KADNDYHHDSKPINPLSRRAITEVLDVGVRSINSFISVGKGQRMGLFAGSGVGKSVLMG 180

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ LVGERGREV+EFIE+ LG+  LK++VVV A +D SP++R     TA
Sbjct: 181 MMTRGTTADVVVVGLVGERGREVKEFIEEILGEEGLKRAVVVAAPADNSPLMRLKGCETA 240

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           V I+EYF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVFS+LP+L+ER G
Sbjct: 241 VQISEYFRDQGLNVLLLLDSLTRYAQAQREIALAVGEPPATKGYPPSVFSKLPQLVERAG 300

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              + +G+ITA  +VL +GD+  DP+AD+ R+ILDGH+VL+R LA+ G YP V+   S+S
Sbjct: 301 NGGEGQGSITAFYTVLTEGDDLQDPVADAARAILDGHVVLSRELADAGHYPAVNIEGSIS 360

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     SAD ++L   L  +   +++ +D+  IG Y  G D  +D+A++ +P+I  FL+
Sbjct: 361 RVMPMVTSADHQELAKQLKQMYALYQQNKDLIAIGAYTKGNDPRIDQAINVLPVINFFLQ 420

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q  +++   D   +   +L+
Sbjct: 421 QKINEVIPYD---QSIAQLK 437


>gi|313227709|emb|CBY22857.1| unnamed protein product [Oikopleura dioica]
          Length = 534

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 174/417 (41%), Gaps = 22/417 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +I      V  L + +   + V     +S   G  + +  D V I   G    I
Sbjct: 51  ETGQVLAIGDGIARVHGL-RNIQAEEMVEF---SSGVKGMALNLERDNVGIVVFGNDRLI 106

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V   G    +       GR ++ LG P+DG   +    L  ++  K P  + R+ 
Sbjct: 107 KEGDTVKRTGAIVDVPVGPELLGRTVDGLGNPLDGLGPID-TKLRRKVDLKAPGIIARKS 165

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TG++ ID   P+  GQR  +      GK      T+L+    +   D       
Sbjct: 166 VHEPMQTGLKAIDSLVPIGRGQRELIIGDRQTGKTAVALDTMLNQARFNQGDDETKKLYC 225

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + +         + S++V+AT+  +  L+ +AP +  ++ E+F   G
Sbjct: 226 IYVAVGQKQSTVSQLVARLEAAGALQYSIIVIATAAYAAPLQYLAPYSGCSMGEWFRDNG 285

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + ++  D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 286 RHAVIFFDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDATGAGSL 345

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 346 TALPVIETQAGDVSAYIPTNVISITDGQIFLENELFLKGIRPAINVGLSVSRVGSAAQMK 405

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             K++  ++   + +F E   +     +   +D    + + +   + + LKQ+  + 
Sbjct: 406 AMKQVSGTMKLDLAQFRE---VAAFAQFGSDMDAATQQQLARGTRLTELLKQNQYEP 459


>gi|33151290|ref|NP_872643.1| F0F1 ATP synthase subunit alpha [Haemophilus ducreyi 35000HP]
 gi|81578260|sp|Q7VPP2|ATPA_HAEDU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33147510|gb|AAP95032.1| ATP synthase alpha chain [Haemophilus ducreyi 35000HP]
          Length = 513

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 187/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMTVKCTGRILEVPVGKGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +   + ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TSLVIDAIIAQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                     G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVERFTNGAVTGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|116629875|ref|YP_815047.1| F0F1 ATP synthase subunit alpha [Lactobacillus gasseri ATCC 33323]
 gi|122273187|sp|Q042L3|ATPA_LACGA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116095457|gb|ABJ60609.1| ATP synthase F1 subcomplex alpha subunit [Lactobacillus gasseri
           ATCC 33323]
          Length = 506

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 178/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G ++ +         L+  +   + +     +    G    
Sbjct: 13  ALIKQQLEKYDDKLNVNEVGTVTYVGDGIARAHGLNNVLS-SELLQFSNGS---YGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LEANDVGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L      
Sbjct: 128 KTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTII 187

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V+  +E       +  ++VV A   E   +  +AP     
Sbjct: 188 NQKGQDVICIYVAIGQKESTVKNSVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 368 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQATQAKLNRGRRTVEVLK 424

Query: 419 QSPS-DLSSED 428
           Q     L  ED
Sbjct: 425 QPLHKPLPVED 435


>gi|319649564|ref|ZP_08003720.1| flagellum-specific ATP synthase [Bacillus sp. 2_A_57_CT2]
 gi|317398726|gb|EFV79408.1| flagellum-specific ATP synthase [Bacillus sp. 2_A_57_CT2]
          Length = 438

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 163/426 (38%), Positives = 243/426 (57%), Gaps = 11/426 (2%)

Query: 7   TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQV 62
            L QL  +  K +   + G +  +  +   +        +GD  +    +G+      +V
Sbjct: 2   KLEQLIHEVDKIDSFKRFGRVKRVVGLM--IESQGPESSIGDVCIIHIGKGRTRRIQAEV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           +    + V + P    ++IS G LV    R   +       G+ I++LG+P+DG  +L K
Sbjct: 60  VGFKNENVILMPYTDVQDISPGSLVETTSRPLEVKIGPALIGKAIDSLGQPLDG-GNLPK 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G   +      P  + R  + +  + G+R+ID    + +GQR+G+FAGSG+GKSTLL M 
Sbjct: 119 GLTPVLTEQTPPNPLKRPPISEPIEVGVRMIDSMLTVGNGQRVGIFAGSGVGKSTLLGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D  +I+L+GERGREVREFI  D   + LK+S+VV ATSD+  ++R     TA  
Sbjct: 179 ARNTNADLNVIALIGERGREVREFIERDLGPEGLKRSIVVAATSDQPALMRIKGAYTATA 238

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG NV+L++DS+TR A + RE+    GE P  +GY  SVF+ LP+LLER G +
Sbjct: 239 IAEYFRDKGLNVMLMMDSVTRVAMAQREVGLAVGEPPTTKGYTPSVFAVLPKLLERTGTN 298

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA  +VLVDGD+ N+PIAD+VR ILDGH VL+R+LA +G+YP ++ L SVSR+
Sbjct: 299 E--YGSITAFYTVLVDGDDMNEPIADTVRGILDGHFVLDRALANKGQYPAINVLKSVSRV 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +    A   K    +  L+  +    D+  IG Y+ G  + +D+A+   P I  FLKQ 
Sbjct: 357 MNHIADASHIKSAEKVRELLSTYINAEDLINIGAYKRGSSMEIDEAIRLYPSIISFLKQE 416

Query: 421 PSDLSS 426
            ++  S
Sbjct: 417 TNEKIS 422


>gi|164685562|gb|ABY66727.1| atp1 [Cynomorium coccineum]
          Length = 413

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIAHVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKVMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   +   LKQ  
Sbjct: 356 SLKLELAQYRE---VAAFSQFGSDLDAATQALLNRGARLTGVLKQPQ 399


>gi|165977084|ref|YP_001652677.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|226739838|sp|B0BRX4|ATPA_ACTPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|165877185|gb|ABY70233.1| ATP synthase alpha chain [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 513

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMSVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|323342945|ref|ZP_08083176.1| ATP synthase F1 sector alpha subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322463009|gb|EFY08204.1| ATP synthase F1 sector alpha subunit [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 506

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 109/432 (25%), Positives = 185/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E + Q+ ++    +      V  G +  +      V  L Q +  G+ +     N
Sbjct: 1   MSNQTENILQMLKEKISTIEFDEANVDVGKVFKVGDGIAFVRGLDQVLS-GEMLRF---N 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  + V +  +G  + +  GD+V+       +       GRV+NALG+PID
Sbjct: 57  DEVFGLALNLEENQVGVVLLGNDKLVKEGDVVYRTNHIIEVGVGDALLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D+   I    P  M R+ V +   TGI+V+D   P+  GQR  +      GK
Sbjct: 117 GQGPVETVDVR-PIERVAPGVMTRKSVHEPLHTGIKVVDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           +   L ++  +     K I   +G++   V   +E     D L+ +VVV +T+ E   L+
Sbjct: 176 TSIALNAILNQKGQNVKCIYVAIGQKASTVAMVVEKLKEHDALEYTVVVSSTASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I E++   G++VL++ D +++ A + R I+           YP  VF    
Sbjct: 236 YLAPYTGCAIGEHWMDNGEDVLIVYDDLSKHAVAYRTISLLLRRPAGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +    G++TA+  +     + +  I  +V SI DG + LN      G  P
Sbjct: 296 RLLERSAKLNENYGGGSMTALPIIETQAGDISAYIPTNVISITDGQLFLNLDSFNSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K + SSL   +  + E   +     +   +D    K +  
Sbjct: 356 AVDSGMSVSRVGSAAQTKAMKHVASSLKLELATYHE---LLSFAQFSSDIDEATQKTIDH 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GRRLTELLKQGA 424


>gi|307246573|ref|ZP_07528644.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307255558|ref|ZP_07537363.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307260009|ref|ZP_07541721.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306852445|gb|EFM84679.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306861407|gb|EFM93396.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306865845|gb|EFM97721.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 513

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMSVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|260780658|ref|YP_003227033.1| ATP synthase CF1 alpha subunit [Bryopsis hypnoides]
 gi|260176736|gb|ACX33745.1| ATP synthase CF1 alpha subunit [Bryopsis hypnoides]
          Length = 500

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 99/428 (23%), Positives = 177/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y++ + VV  G +  +      +  L + V  G+ +         +G  + 
Sbjct: 11  SIIRQQIEQYNQEVKVVNIGTVFQVGDGIARIYGLEK-VMAGELLEFADG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +G G  +  G  V   G+  +I     + GR++  L KPIDG   +   +
Sbjct: 67  LETKNVGAVLMGEGIAVQEGSSVRATGKIAQIPVGENFLGRIVTPLAKPIDGKGEIETKE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  +D   P+  GQR  +      GK+ +      
Sbjct: 127 TRL-IESNAPGIISRRSVYEPLQTGLMAVDSMIPIGRGQRELIIGDRFTGKTAIAVDTIL 185

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +         + +V+V A +D +  L+ ++P T  T
Sbjct: 186 NQKGKDVTCVYVAIGQKASSVAQVVNSLKERGALEYTVIVAANADSAATLQYLSPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF   G    +I D +++ + S RE++      P    YP  VF    RLLER    
Sbjct: 246 IAEYFMYTGRPTFVIYDDLSKQSQSYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVS
Sbjct: 306 SDKLGGGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLSSDIFNSGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQPKAMKKIAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGQRLREILK 422

Query: 419 QSPSDLSS 426
           Q  +   S
Sbjct: 423 QPQASPLS 430


>gi|24298788|dbj|BAC22103.1| F-ATPase alpha-subunit [Thermotoga neapolitana]
          Length = 503

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 97/432 (22%), Positives = 178/432 (41%), Gaps = 18/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   + ++ E+  K+   +      G +  +      V  L++ V + + V      
Sbjct: 1   MRINPGEITKVLEEKIKSFEEKIDLEDTGKVIQVGDGIARVYGLNK-VMVSELVEFVETG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G    +  D V I  +G  ++I  G  V    R   +       GRV+N LG+P+D
Sbjct: 60  --VKGVAFNLEEDNVGIIVLGEYKDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    I  K P  + R+ V+   +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GKGPINAKNFR-PIEIKAPGVIYRKPVDTPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +        I   +G++   +   I+        + + VVVA++ +   L+
Sbjct: 177 TAIAIDTIINQKGQGVYCIYVAIGQKKSAIARIIDKLRQYGALEYTTVVVASASDPATLQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF+  G + L++ D +++ A + R+++      P    YP  +F    
Sbjct: 237 YIAPYAGCAMGEYFAYSGRDALVVYDDLSKHAVAYRQLSLLMRRPPGREAYPGDIFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 297 RLLERAVRLNDKLGGGSLTALPIVGTQANDISAYIPTNVISITDGQIYLEPGLFYAGQRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E         +   +D      + +
Sbjct: 357 AINVGLSVSRVGGAAQIKAMKQVAGMLRIELAQYRELE---TFAQFATELDPATRAQIVR 413

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 414 GQRLMELLKQEQ 425


>gi|116328615|ref|YP_798335.1| F0F1 ATP synthase subunit alpha [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331344|ref|YP_801062.1| F0F1 ATP synthase subunit alpha [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280910|sp|Q04S16|ATPA_LEPBJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122283598|sp|Q04ZU3|ATPA_LEPBL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116121359|gb|ABJ79402.1| Alpha subunit of the H(+)-transporting two- sector ATPase, F1
           sector [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116125033|gb|ABJ76304.1| Alpha subunit of the H(+)-transporting two- sector ATPase, F1
           sector [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 503

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 112/437 (25%), Positives = 180/437 (41%), Gaps = 17/437 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   +Y K+L V + G +  I      V  L + V  G+ V  Q       GQ   
Sbjct: 10  SVLKQEILNYKKDLGVDEVGTVLEIGDGIARVYGL-KNVMSGEMVEFQNG---IFGQAFN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +   G    I  G  V    R   +       GRV+N LG+P+DG   +    
Sbjct: 66  LEDNSVGVVVYGDYLAIQEGFTVKRTSRILEVPVGPELLGRVVNPLGEPLDGKGPIN-AK 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
           L+  + S  P    RQ V +  +TGI+ ID   P+  GQR  +    G GK+   L ++ 
Sbjct: 125 LTRPVESPAPGIAMRQPVGEPMQTGIKAIDAMIPIGRGQRELIIGDRGTGKTSIALDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V   +E        + ++VV AT+ E   L+ +AP +  +
Sbjct: 185 NQKGTGVICVYVAIGQKASTVASTVEMLRNKGALEYTIVVSATAAEPAPLQYIAPYSGCS 244

Query: 241 IAEYFSSKGDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF         ++ D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 245 MAEYFMYNEKKATLVVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAK 304

Query: 300 SEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            + + G  ++TA+  +       +  I  +V SI DG I L  +L   G  P VD   SV
Sbjct: 305 LDDKYGAGSLTALPIIETQEGEVSAYIPTNVISITDGQIYLQSNLFASGNRPAVDVGISV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     K++   +   + +F   RD+         +D      + +   I   L
Sbjct: 365 SRVGSAAQIKAMKQVAGKMKLELAQF---RDLEAFAQLGTELDPATQAQLDRGNRIVQML 421

Query: 418 KQSP-SDLSSEDVFQEI 433
           KQ   S    E+   EI
Sbjct: 422 KQPVSSPFPVEEQVVEI 438


>gi|118474658|ref|YP_892815.1| flagellum-specific ATP synthase [Campylobacter fetus subsp. fetus
           82-40]
 gi|261885883|ref|ZP_06009922.1| flagellum-specific ATP synthase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
 gi|118413884|gb|ABK82304.1| flagellar protein export ATPase FliI [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 434

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 162/419 (38%), Positives = 239/419 (57%), Gaps = 10/419 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYICPVGIGEE 80
            G I+ IT+    +T L     +GD V       N + LG V  +N     + P G  E 
Sbjct: 20  FGIITKITTNNMEITGLRP--SIGDIVRIISIDGNKNELGMVTGLNQTGASVSPFGFVEG 77

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
             +GD V+   +   I       GRV++    P D   ++ +    + IM    PAM R 
Sbjct: 78  FKIGDRVYASDQGMSIPVGESLLGRVVDPFMNPKDSKGAI-EATTYVPIMQMPIPAMKRG 136

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            + + F  G++ ID       GQ++G+FAGSG+GKSTL+ M  ++      +++L+GERG
Sbjct: 137 LINEPFSVGVKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNSVAPIKVVALIGERG 196

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EFIE  L  +L  +V++VATSD+SP++RK     A+++AEYF S G +VL I+DS+
Sbjct: 197 REVPEFIEKNLNGDLSNTVIIVATSDDSPLMRKYGAFCAMSVAEYFKSSGRDVLFIMDSV 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI    GE P ++GYP SV + LP+L+ER G  E  KG+ITA  +VLV+GD+
Sbjct: 257 TRFAMAQREIGLALGEPPTSKGYPPSVLTILPQLMERAGKEEG-KGSITAFFTVLVEGDD 315

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+     S + +   S    L
Sbjct: 316 MSDPIADQSRSILDGHIVLSRELTDFGIYPPINILNSASRVMGDVTSKEHRANASKFKRL 375

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
               +E   +  IG Y+ G+D  LD A+ +   + +F+KQ+P++      F++  K L+
Sbjct: 376 FSMLKENEVLIRIGAYQKGIDKELDSAISKKGFMEEFMKQNPTEGFK---FEDTIKMLE 431


>gi|295696116|ref|YP_003589354.1| flagellar protein export ATPase FliI [Bacillus tusciae DSM 2912]
 gi|295411718|gb|ADG06210.1| flagellar protein export ATPase FliI [Bacillus tusciae DSM 2912]
          Length = 441

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 165/440 (37%), Positives = 241/440 (54%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ+  +T A         L    G ++   +V  TV        +GD    +        
Sbjct: 1   MQEGWDTNAYCETLRRSPLWRVSGRVAQ--AVGMTVESNGPVARVGDLCSIETDAGPRFA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+      + + P    + I  G +V       R+       GRV++ LG+PIDG   +
Sbjct: 59  EVVGFRNRRLILMPFSDLDRIHNGAVVKVVSEGLRVPTGPGILGRVVDGLGRPIDGLGPV 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+    I    PP M R  V +    G+R ID    +  GQRIG+FAGSG+GKSTLL 
Sbjct: 119 -AGEFQDPIEQPPPPPMARTPVNQPLSVGVRAIDGLLTVGQGQRIGIFAGSGVGKSTLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D  +I L+GERGREV++FI  +   +  K++VVV ATSD+ P++R    LTA
Sbjct: 178 MIARYTEADVTVIGLIGERGREVQDFIARELDEEGRKRAVVVAATSDQPPLMRIKGALTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AE F  +G  VLL++DS+TRFA + RE+   +GE P ARGY  SVF+ LP+LLER G
Sbjct: 238 TAMAERFRRQGRRVLLLMDSVTRFAMACREVGLAAGEPPTARGYTPSVFAALPKLLERTG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +    G+ITA  +VLV+GD+ N+PIAD+VR ILDGHIVL+R +A++G YP +D  AS S
Sbjct: 298 TART--GSITAFYTVLVEGDDFNEPIADAVRGILDGHIVLSRKIAQQGLYPAIDVTASTS 355

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL ++       +  +    L+  +EE  D+  IG YR G  L +D A+   P ++ +L 
Sbjct: 356 RLMNQVAETAHVRAAARFKALLAAYEEAEDLIQIGAYREGTRLEVDTALRLRPRMWAYLA 415

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q+    S  D+ + + + ++
Sbjct: 416 QNRDVRS--DMGEAVRQLME 433


>gi|73666716|ref|YP_302732.1| F0F1 ATP synthase subunit alpha [Ehrlichia canis str. Jake]
 gi|108884790|sp|Q3YT21|ATPA_EHRCJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|72393857|gb|AAZ68134.1| ATP synthase F1, alpha subunit [Ehrlichia canis str. Jake]
          Length = 509

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 102/437 (23%), Positives = 183/437 (41%), Gaps = 23/437 (5%)

Query: 5   LETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L  + +  E++   +     G + SI      V  L +    G+ VV         G V+
Sbjct: 11  LRVIKERIENFDNQVKADSVGEVISIKDGIAIVYGLEK-AKFGEVVVFTNG---VTGIVL 66

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            ++ D   +   G    +  GD     G+    P      GRV++ALG PIDG  ++   
Sbjct: 67  GLDCDTASVVIFGNERSVGEGDTAKCTGKLMDVPVGFELLGRVVDALGNPIDGAGNVD-S 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            + + +  K P  + RQ V +  +TGI+VID+  P+  GQR  +      GK+ +     
Sbjct: 126 KIRLPVEIKAPGIIARQSVSEPLQTGIKVIDMLIPIGRGQRELIIGDRKTGKTAIAIDTI 185

Query: 183 RSDC----------FDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
            +                I   +G++   +   ++       L+ ++VV A + ++   +
Sbjct: 186 INQKLHNDTVSEKEKVYCIYVAIGQKNSAIARIVDKLRVSGALEYTIVVAAGASDTVSFQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 246 YLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFFLHS 305

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      EKG  ++TA+  +     + +  +  +V SI DG I L   +  +G  P
Sbjct: 306 RLLERAAKMSDEKGAGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESEIFYKGFRP 365

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     KK+  S+   + ++ E  D      +   +D+   K + +
Sbjct: 366 AVNVGLSVSRVGSAAQIKSVKKVAGSVKLSLAQYRELEDFA---KFGSDIDVHSKKVLDR 422

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      S
Sbjct: 423 GRRMMELLKQKQYSPLS 439


>gi|332163582|ref|YP_004424924.1| type III secretion system ATPase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667812|gb|ADZ44455.1| type III secretion system ATPase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 410

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 158/405 (39%), Positives = 226/405 (55%), Gaps = 10/405 (2%)

Query: 38  CLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-R 94
            +   V +G+    +  ++      +VI        + P+G    IS    V   G   +
Sbjct: 8   AVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLIPLGEMYGISSNTEVSPTGTMHQ 67

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +       G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID 
Sbjct: 68  VGVGEHLLGQVLDGLGQPFDG-GHLPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDG 126

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDN 213
                 GQR+G+FA +G GKSTLL+   RS   D  +++L+GERGREVREFIE D   + 
Sbjct: 127 LLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEG 186

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+K+V+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +
Sbjct: 187 LRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 246

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  RGYP SVF+ LPRL+ER G S K  G+ITA+ +VLV+GD+  +P+AD  RSILD
Sbjct: 247 GEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILD 304

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHI+L+R LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG
Sbjct: 305 GHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIG 364

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            Y+ G D   D+A+ ++  I  +L Q   +LS    F E    L+
Sbjct: 365 EYQKGQDKEADQAIERIGAIRGWLCQGTHELSH---FNETLNLLE 406


>gi|285019668|ref|YP_003377379.1| ATP synthase subunit alpha [Xanthomonas albilineans GPE PC73]
 gi|283474886|emb|CBA17385.1| probable atp synthase, alpha subunit protein [Xanthomonas
           albilineans]
          Length = 515

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 184/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L ++  + +         G ++S++     +  L+  V  G+ +       D 
Sbjct: 6   NPSEISELIKNRIEQVKLAAESRNEGTVTSVSDGIVRIFGLAD-VMQGEMIELPN---DT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  YALALNLERDSVGAVVLGDYENLREGDIAKTTGRILEVPVGKELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ L
Sbjct: 122 PLG-TRATAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELLIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     ++VV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKTTGIKCVYVAIGQKASTVANIVRKLEENGALAHTIVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEQFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|157363031|ref|YP_001469798.1| F0F1 ATP synthase subunit alpha [Thermotoga lettingae TMO]
 gi|166990364|sp|A8F3K0|ATPA_THELT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157313635|gb|ABV32734.1| ATP synthase F1, alpha subunit [Thermotoga lettingae TMO]
          Length = 503

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 95/439 (21%), Positives = 177/439 (40%), Gaps = 18/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +   + ++ ED  K       + + G +  I      V  L+  V   + V      
Sbjct: 1   MRISPGEITKVLEDRIKEFKEEIDLQETGRVVQIGDGIARVYGLN-SVMADELVEFVETG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G    +  D V +  +G   +I  G +V    +   +       GRV+N LG+P+D
Sbjct: 60  --VKGLAFNLEEDNVGVILLGPYSQIKEGHIVKRLKKIIEVPVGEELLGRVVNPLGEPLD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +   + +I  K P  + R+ V    +TGI+ ID   P+  GQR  +      GK
Sbjct: 118 GLGPV-EAKHTRKIEIKAPGVIYRRPVNTPLQTGIKAIDAMIPIGRGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +        I   +G++   V   ++       ++ + VVVA++ +   ++
Sbjct: 177 TAIAIDTIINQKGKGVYCIYVAIGQKTAAVARIVDKLREFGAMEYTTVVVASASDPAPIQ 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF     + L++ D +++ A + R+++      P    YP  +F    
Sbjct: 237 YIAPYAGCAMGEYFMYNSKDALVVYDDLSKHAAAYRQLSLLLRRPPGREAYPGDIFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER    + +   G++TA+  V    ++ +  I  +V SI DG I L   L   G  P
Sbjct: 297 RLLERAARLDDKMGGGSLTALPIVETQANDVSAYIPTNVISITDGQIYLEPGLFYSGFRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E         +   +D      + +
Sbjct: 357 AINVGLSVSRVGGSAQIRAMKQVAGMLRIDLAQFRELE---TFAQFASELDPATRAQIVR 413

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 414 GQHLQELLKQDQYSPLPVE 432


>gi|6561657|gb|AAF17001.1|AF197669_1 ATPase alpha subunit [Aristolochia macrophylla]
          Length = 421

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 409


>gi|57234628|ref|YP_181305.1| F0F1 ATP synthase subunit alpha [Dehalococcoides ethenogenes 195]
 gi|115312244|sp|Q3Z8Z4|ATPA_DEHE1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|57225076|gb|AAW40133.1| ATP synthase F1, alpha subunit [Dehalococcoides ethenogenes 195]
          Length = 503

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 97/430 (22%), Positives = 175/430 (40%), Gaps = 14/430 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q  +  + +  +++   + +   G +  +      +  LS      + +   G     +G
Sbjct: 6   QDIVSIIKEQIKEFGAPVSMTSVGSVIEVGDGIARIHGLS-NAKYNELLEFPGG---VMG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V    +G    I  GD V   GR   I+      GRV++ LG+P+DG   +
Sbjct: 62  IALNLEEDSVAAVILGDDANIKEGDEVKATGRISEITVGKGMIGRVVDPLGRPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K +    +    P  ++R+ V    +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 -KAETVRPLERIAPNVVDRKSVNTPVQTGIKAIDAMIPIGRGQRELIIGDRSTGKTAIAL 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
               +        I   +G++  +V   +         + ++VV A S ++  L+ +AP 
Sbjct: 181 DTIINQKGGDLVCIYVAIGQKASKVARTVALLEQYGAMEHTIVVAANSSDAVALQYLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               I E F  +G + L++ D +T+ A + R+++      P    YP  VF    RLLER
Sbjct: 241 AGCAIGEEFMEQGQDALVVYDDLTKHAWAYRQLSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +     + +  +  +V SI DG I L   +   G  P V+  
Sbjct: 301 AARLNDKLGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIYLEPDMFNSGIRPAVNVG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK+ S L   + ++ E       G     +D      + +   I 
Sbjct: 361 ISVSRVGSSAQTKAMKKVASKLKMDMGQYRELAAFAQFG--TSELDKATRMQLERGQRIT 418

Query: 415 DFLKQSPSDL 424
           + LKQ     
Sbjct: 419 EVLKQGQYQP 428


>gi|42524760|ref|NP_970140.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100]
 gi|39576970|emb|CAE78199.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100]
          Length = 442

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 250/441 (56%), Gaps = 13/441 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNL 59
           + NL+  + + +  S +L    G ++ +  +   +        +G  V     G     L
Sbjct: 5   ELNLDKYSDVIQ--SVHLTKDSGKVTEVNGML--IKGYLPGASVGSIVSINPSGMEKSFL 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
            +V+      V +  +     ++LG  +    +   +       GRV++ LG+P+D    
Sbjct: 61  AEVVGFKDKHVLMMALNDMRGVALGSKIVLARQIATVRAGEELLGRVVDGLGRPLDDKGE 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +    + + S+V   ++R+ + +    GIR I+       GQR+ + AGSG+GKS LL
Sbjct: 121 V-ENFREVPLYSEVRNPLDRRPIREPIDLGIRAINGALTAGLGQRVAIMAGSGVGKSVLL 179

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+++GERGREVREFI  D   + +K+SVVV  TSD+SP+LR      
Sbjct: 180 GMMARNTNADVNVIAMIGERGREVREFIEHDLGPEGMKRSVVVCVTSDQSPLLRMRGAYV 239

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  +AEYFSS+G NVLL++DS+TRFA + REI  ++GE P  +GY  SVF+ LP+LLER 
Sbjct: 240 ATALAEYFSSQGKNVLLMMDSVTRFAMAQREIGLSTGEPPSQKGYTPSVFATLPKLLERA 299

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E  +G+IT   + LV+GD+ NDPI DSVRSI+DGHIVL+RSLA++G +P +D + S 
Sbjct: 300 GSFEG-EGSITGFYTTLVEGDDMNDPIGDSVRSIVDGHIVLSRSLAQKGHFPAIDIMQSA 358

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+     S +  KL   L   +  +++  D+  IG Y+PG +  +D+AV  +  + DFL
Sbjct: 359 SRVMRAVSSPEHSKLAQKLRETLAVYKDAEDLINIGAYKPGSNPKIDRAVKVIDQVNDFL 418

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           KQ   D ++   F +  +++Q
Sbjct: 419 KQRVEDPTN---FTQTVRQMQ 436


>gi|32034346|ref|ZP_00134546.1| COG0056: F0F1-type ATP synthase, alpha subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209112|ref|YP_001054337.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           L20]
 gi|303252039|ref|ZP_07338209.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248697|ref|ZP_07530710.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|158513514|sp|A3N2U6|ATPA_ACTP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|126097904|gb|ABN74732.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|302649103|gb|EFL79289.1| F0F1 ATP synthase subunit alpha [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306854624|gb|EFM86814.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 513

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMSVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|328542575|ref|YP_004302684.1| H+-transporting two-sector ATPase FliI [polymorphum gilvum
           SL003B-26A1]
 gi|326412321|gb|ADZ69384.1| H+-transporting two-sector ATPase FliI [Polymorphum gilvum
           SL003B-26A1]
          Length = 441

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 162/420 (38%), Positives = 245/420 (58%), Gaps = 5/420 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKN-SDNLGQVIRINLDIVYICPVGIGEEI 81
           G + ++  +   +      + +G  +    G   +    +V+          P    E +
Sbjct: 18  GRVVAVQGLLVEIAGPIHEMSVGSRLTIDIGDGVTPVSAEVVGFRDGHALCMPFAGLEGV 77

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +G   V       + P+  W GRVINA+G+PIDG  +L  G+    + S  PPA  R R
Sbjct: 78  RMGCKAVIAARESVVHPANAWLGRVINAMGEPIDGKGALPGGETPRRLRSAPPPASERAR 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V      G+R ++ F   C GQR+G+FAGSG+GKS L+SM AR+   D  +I L+GERGR
Sbjct: 138 VGPPLDLGVRALNTFVTCCEGQRMGIFAGSGVGKSVLMSMLARNTDCDVAVIGLIGERGR 197

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFI +D     L +SVVVVATSDES ++R+ A   A+T+AE+F  +G  VL ++DS+
Sbjct: 198 EVQEFIEDDLGEAGLARSVVVVATSDESVLMRRQAAYLAMTVAEHFRDEGAKVLCMMDSV 257

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI  + GE P ++GY  +VF+ELPRLLER GP     G+IT + +VLV+GDN
Sbjct: 258 TRFAMAQREIGLSIGEPPTSKGYTPTVFTELPRLLERAGPGRVGSGSITGLFTVLVEGDN 317

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HN+P+AD+VR ILDGH+V+ RS+AE GRYP ++ L SVSR   +        ++     L
Sbjct: 318 HNEPVADAVRGILDGHVVMERSIAERGRYPAINVLKSVSRTMPRCVPEPLVPVLRKARQL 377

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           +  F +  ++  +G YR G D ++D+A+ +   +  FL Q+  + ++ E+ +  +   L+
Sbjct: 378 MATFSDMEELIRLGAYRRGSDPVVDEAIARHDALEGFLSQTKDEATALEEGYLRLANLLE 437


>gi|71901246|ref|ZP_00683346.1| ATP synthase F1, alpha subunit [Xylella fastidiosa Ann-1]
 gi|71728979|gb|EAO31110.1| ATP synthase F1, alpha subunit [Xylella fastidiosa Ann-1]
          Length = 515

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 100/440 (22%), Positives = 187/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L +   + +         G ++S++     +  L+     G+ +    K    
Sbjct: 6   NPSEISELIKTRIEQVKLSAESRNEGTVTSVSDGIVRIFGLAD-AMQGEMIELPNK---T 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  YALALNLERDSVGAVVLGDYEHLREGDVAKTTGRILEVPVGKSLLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 ALGPT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              ++ ++     K +   +G++   +   +      D L  ++VV AT+ ES  L+ ++
Sbjct: 181 AIDTVISQKHTGIKCVYVAIGQKASTIANIVRKLEENDALDHTIVVAATASESAALQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYAGCTMGEYFMDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTQGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 TTRKQLERGQRVTELMKQKQ 437


>gi|171321463|ref|ZP_02910409.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MEX-5]
 gi|171093261|gb|EDT38463.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MEX-5]
          Length = 442

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 165/444 (37%), Positives = 242/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +  +  
Sbjct: 2   NALTDLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRSASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            L   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LLQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGPLDY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E  +G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--QGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQIATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDAAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + +  D        L
Sbjct: 417 RTFLNQRTDEYAPPDATLAALHAL 440


>gi|34782901|gb|AAH08028.2| ATP5A1 protein [Homo sapiens]
          Length = 450

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 166/376 (44%), Gaps = 18/376 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G  + I  GD+V   G    +       GRV++ALG  IDG   
Sbjct: 1   GMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGP 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           +G       +  K P  + R  V +  +TGI+ +D   P+  GQR  +      GK    
Sbjct: 61  IG-SKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIA 119

Query: 175 -STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
             T+++    +D  D       I   +G++   V + ++     D +K ++VV AT+ ++
Sbjct: 120 IDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDA 179

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +  ++ EYF   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 180 APLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 239

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER          G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 240 YLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 299

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   K++  ++   + ++ E   +     +   +D    +
Sbjct: 300 GIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQ 356

Query: 406 AVHQVPIIYDFLKQSP 421
            + +   + + LKQ  
Sbjct: 357 LLSRGVRLTELLKQGQ 372


>gi|68171285|ref|ZP_00544686.1| ATP synthase F1, alpha subunit [Ehrlichia chaffeensis str. Sapulpa]
 gi|88657691|ref|YP_506960.1| F0F1 ATP synthase subunit alpha [Ehrlichia chaffeensis str.
           Arkansas]
 gi|115312247|sp|Q2GHX3|ATPA_EHRCR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|67999300|gb|EAM85948.1| ATP synthase F1, alpha subunit [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599148|gb|ABD44617.1| ATP synthase F1, alpha subunit [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 509

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 103/437 (23%), Positives = 187/437 (42%), Gaps = 23/437 (5%)

Query: 5   LETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L+ + +  E++   +     G + SI      +  L +    G+ VV         G V+
Sbjct: 11  LKVIKERIENFDNQVKSDSVGEVISIKDGIALIYGLEK-AKFGEVVVFANG---ITGIVL 66

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            ++ D   +   G    +  GD     G+    P      GRV++ALG PIDG  S+   
Sbjct: 67  GLDCDTASVVVFGDERSVGEGDTAKCTGKLMDVPVGLELLGRVVDALGNPIDGAGSID-S 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
              + +  K P  + RQ V +  +TGI++ID+  P+  GQR  +      GK      T+
Sbjct: 126 KTRLPVEIKAPGIIARQSVTEPLQTGIKIIDMLIPIGRGQRELIIGDRKTGKTAIAIDTI 185

Query: 178 LSMFARSD-----CFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
           ++  A +D          I   +G++   V   ++       L+ ++VV A + ++   +
Sbjct: 186 INQKAHNDVVSEKEKVYCIYVAIGQKNSSVARIVDKLRVSGALEYTIVVAAGASDTVSFQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 246 YLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFFLHS 305

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  +  +V SI DG I L   +  +G  P
Sbjct: 306 RLLERAAKMSDKEGGGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESEIFYKGLRP 365

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A +   KK+  S+   + ++ E  D      +   +D+   K + +
Sbjct: 366 AVNVGLSVSRVGSAAQTKSVKKVAGSVKLSLAQYRELEDFA---KFGSDIDVHSQKVLDR 422

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      S
Sbjct: 423 GRRMMELLKQKQYSPLS 439


>gi|307822875|ref|ZP_07653106.1| flagellar protein export ATPase FliI [Methylobacter tundripaludum
           SV96]
 gi|307736479|gb|EFO07325.1| flagellar protein export ATPase FliI [Methylobacter tundripaludum
           SV96]
          Length = 454

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 151/441 (34%), Positives = 246/441 (55%), Gaps = 13/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           ++   E LA++ E      +V  G +S +     T+  +     +G     + K+   + 
Sbjct: 15  LKPYSERLAEVPE------LVVEGKLSRMVG--LTLEAVGCRAAIGSRCRIETKSGRMIE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDS 118
            +V+  +   +++ P      +     V   G+  ++       GRV++  G  ID    
Sbjct: 67  AEVVGFSDARIFLMPTAEVHGLEPDCRVIPLGKNSLARVGFGLLGRVLDGAGNAIDDKGP 126

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L K D  + +       ++R+ + +    G+R I+    +  GQR+G+FAG+G+GKS LL
Sbjct: 127 L-KTDAQISLNGVPINPLSRRPIREPLDVGVRAINSILSVGRGQRMGLFAGTGVGKSVLL 185

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M  +    D V++ L+GERGREV EF+ +    + LK++VVVV+ +D  P++R  A L 
Sbjct: 186 GMMTKFTTADVVVVGLIGERGREVNEFVLKTLGEEGLKRAVVVVSPADCPPLMRVHAALL 245

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           + +IAEYF  +G +VLL++DS+TRFA + REIA +  E P  +GYP SVF++LP L+ER 
Sbjct: 246 STSIAEYFRDQGLDVLLLMDSLTRFAQAHREIALSIDEPPATKGYPPSVFAKLPHLVERA 305

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G ++   G+ITA  +VL +GD+ NDPIAD+ R +LDGH++L+RSLAE G +P +D  AS+
Sbjct: 306 GNADHGGGSITAFYTVLAEGDDTNDPIADAARGVLDGHVILSRSLAESGHFPAIDIEASI 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+      A   ++   L  L   +++ RD+  +G Y+PG D  +DKA+ + P I DFL
Sbjct: 366 SRVMPDIIDAGHLQMARELRRLYSLYQQNRDLISVGAYQPGSDPRIDKAIERNPAILDFL 425

Query: 418 KQSPSDLSSED-VFQEITKKL 437
           +Q   +    +   QE+   L
Sbjct: 426 QQDMDEPVDINRSLQELATLL 446


>gi|293393687|ref|ZP_06637996.1| ATP synthase F1 sector alpha subunit [Serratia odorifera DSM 4582]
 gi|291423809|gb|EFE97029.1| ATP synthase F1 sector alpha subunit [Serratia odorifera DSM 4582]
          Length = 513

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-EHDGFSPVETIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|254469170|ref|ZP_05082575.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pseudovibrio sp. JE062]
 gi|211961005|gb|EEA96200.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pseudovibrio sp. JE062]
          Length = 458

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 151/411 (36%), Positives = 227/411 (55%), Gaps = 8/411 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            G +  +      +  +   V +G+      +      + +V+  + D   + P+G    
Sbjct: 42  TGRVRKVVGTL--IHAVVPKVEIGEIAELYTRSTGRRLMAEVVGFHDDEALLSPIGELYG 99

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V   G  + ++      GRV++ +G  IDG D     +    +    P  M RQ
Sbjct: 100 VGPDTEVRPTGHVQTVAVGEGLLGRVLDGMGNFIDGVDQEFVPETHYPVNQDPPDPMQRQ 159

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            ++K    G+R ID       GQR+G+FA +G GKSTL++M  +    D  +++L+GERG
Sbjct: 160 IIDKPLPMGVRAIDGMLTTGEGQRMGIFASAGGGKSTLMAMLVKGAAVDVTVLALIGERG 219

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFI  D   + +KKSVVVVATSD+S + R  A   A +IAEYF  +G  VLL++DS
Sbjct: 220 REVREFIEHDLGPEGMKKSVVVVATSDKSSLERSKAAFVATSIAEYFRDQGKRVLLLMDS 279

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RG+P SVF+ LPRL+ER G ++K  G+ITA  +VL++GD
Sbjct: 280 VTRFARAQREIGLAVGEPPTRRGFPPSVFATLPRLMERAGMNDK--GSITAFYTVLMEGD 337

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P++D  RSILDGHIVL+R LA    YP +D L S SR+     S + +++   +  
Sbjct: 338 DMNEPVSDETRSILDGHIVLSRKLAAANHYPAIDILNSKSRVMTAVTSPEHREMSGKVNS 397

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           L+ ++EE   +  IG Y+ G D   D A+ +   I +FL+Q   +    DV
Sbjct: 398 LLAKYEEVELLVQIGEYQKGADSEADLAIAKNKPIKEFLQQRTDEFDGFDV 448


>gi|167626201|ref|YP_001676495.1| F0F1 ATP synthase subunit alpha [Shewanella halifaxensis HAW-EB4]
 gi|189081317|sp|B0TQF6|ATPA_SHEHH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167356223|gb|ABZ78836.1| ATP synthase F1, alpha subunit [Shewanella halifaxensis HAW-EB4]
          Length = 513

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFNVVSEARNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYANLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPL-EHDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKDTGIKCVYVAVGQKASTIANVVRKLDEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|6561704|gb|AAF17048.1|AF197716_1 ATPase alpha subunit [Triglochin maritima]
          Length = 421

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 97/415 (23%), Positives = 175/415 (42%), Gaps = 22/415 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVXDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVII 192
           +  +TG++ +D   P+  GQR  +      GK+ +          L+  A+ +     + 
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNATAKENEKLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ ++P +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILESANALEYSILVAATASDPAPLQFLSPYSGCALGEYFRDHGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER     +E   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           K++  S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 KQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 407


>gi|164685576|gb|ABY66734.1| atp1 [Borago officinalis]
          Length = 413

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSNHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESERLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     KK+  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKKVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|227889721|ref|ZP_04007526.1| H(+)-transporting two-sector ATPase [Lactobacillus johnsonii ATCC
           33200]
 gi|300361420|ref|ZP_07057597.1| ATP synthase F1 sector alpha subunit [Lactobacillus gasseri JV-V03]
 gi|227849585|gb|EEJ59671.1| H(+)-transporting two-sector ATPase [Lactobacillus johnsonii ATCC
           33200]
 gi|300354039|gb|EFJ69910.1| ATP synthase F1 sector alpha subunit [Lactobacillus gasseri JV-V03]
 gi|329667590|gb|AEB93538.1| ATP synthase F1 [Lactobacillus johnsonii DPC 6026]
          Length = 506

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 178/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G ++ +         L+  +   + +     +    G    
Sbjct: 13  ALIKQQLEKYDDKLNVNEVGTVTYVGDGIARAHGLNNVLS-SELLQFSNGS---YGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LEANDVGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L      
Sbjct: 128 KTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTII 187

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V+  +E       +  ++VV A   E   +  +AP     
Sbjct: 188 NQKGQDVICIYVAIGQKESTVKNSVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 308 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 368 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQATQAKLNRGRRTVEVLK 424

Query: 419 QSPS-DLSSED 428
           Q     L  ED
Sbjct: 425 QPLHKPLPVED 435


>gi|169303182|gb|ACA53188.1| ATP synthase alpha subunit [Callithamnion tetricum]
          Length = 404

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 99/404 (24%), Positives = 165/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L + V  G+ +         +G  + +  D V +  +G G 
Sbjct: 7   VANVGTVLQVGDGIARVYGLDE-VMAGELLEFD-DQEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID        D  + I S  P  + R
Sbjct: 65  NILEGSSVQSTGKIAQIPVGEEFLGRVVNPLAEPIDAKGIPNSSDTRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI--ISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +     VI     +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQNVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF   G   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYIGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|34539435|gb|AAQ74601.1| F1-ATPase alpha subunit [Sisyrinchium angustifolium]
          Length = 417

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGVALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFIAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|58337088|ref|YP_193673.1| F0F1 ATP synthase subunit alpha [Lactobacillus acidophilus NCFM]
 gi|75432973|sp|Q5FKY2|ATPA_LACAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|58254405|gb|AAV42642.1| ATP synthase alpha subunit [Lactobacillus acidophilus NCFM]
          Length = 503

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 177/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L   +  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLDDVLS-GELLKFDNGS---FGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KSD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEAKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLTAYRELESFAQFG---SDLDQATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|223041782|ref|ZP_03611973.1| FOF1 ATP synthase subunit alpha [Actinobacillus minor 202]
 gi|223017408|gb|EEF15828.1| FOF1 ATP synthase subunit alpha [Actinobacillus minor 202]
          Length = 513

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 107/444 (24%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGIIRVHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMTVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|183597135|ref|ZP_02958628.1| hypothetical protein PROSTU_00374 [Providencia stuartii ATCC 25827]
 gi|188023445|gb|EDU61485.1| hypothetical protein PROSTU_00374 [Providencia stuartii ATCC 25827]
          Length = 513

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVSDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K ++    + + LKQ  
Sbjct: 413 LDDATRKQLNHGQKVTELLKQKQ 435


>gi|15605402|ref|NP_220188.1| type III secretion system ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|166154886|ref|YP_001653141.1| type III secretion system ATPase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|255311495|ref|ZP_05354065.1| type III secretion system ATPase [Chlamydia trachomatis 6276]
 gi|255317797|ref|ZP_05359043.1| type III secretion system ATPase [Chlamydia trachomatis 6276s]
 gi|255349058|ref|ZP_05381065.1| type III secretion system ATPase [Chlamydia trachomatis 70]
 gi|255503596|ref|ZP_05381986.1| type III secretion system ATPase [Chlamydia trachomatis 70s]
 gi|3329120|gb|AAC68264.1| Yops secretion ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|165930874|emb|CAP06436.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|289525713|emb|CBJ15194.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           Sweden2]
 gi|296435283|gb|ADH17461.1| type III secretion system ATPase [Chlamydia trachomatis E/150]
 gi|296436210|gb|ADH18384.1| type III secretion system ATPase [Chlamydia trachomatis G/9768]
 gi|296437138|gb|ADH19308.1| type III secretion system ATPase [Chlamydia trachomatis G/11222]
 gi|296438070|gb|ADH20231.1| type III secretion system ATPase [Chlamydia trachomatis G/11074]
 gi|296439001|gb|ADH21154.1| type III secretion system ATPase [Chlamydia trachomatis E/11023]
 gi|297140571|gb|ADH97329.1| type III secretion system ATPase [Chlamydia trachomatis G/9301]
 gi|297748800|gb|ADI51346.1| SctN [Chlamydia trachomatis D-EC]
 gi|297749680|gb|ADI52358.1| SctN [Chlamydia trachomatis D-LC]
          Length = 442

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 159/434 (36%), Positives = 242/434 (55%), Gaps = 13/434 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDI 69
           + E     L    G I  +  +   +  +   V +G+  + +       + +V+    + 
Sbjct: 12  MTELPDVQLTAVVGRIIEVVGML--IKAVVPDVRVGEVCLVKRHGMEPLVTEVVGFTQNF 69

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSM 126
           V++ P+G    +S    V   G    I       GRV+N LG PID      L   D   
Sbjct: 70  VFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKGPLENVDAIY 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+LL M AR+  
Sbjct: 130 PIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSLLGMIARNAE 189

Query: 187 -FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREFI  D   + +K+SV+VV+TSD+S  LR  A      IAEY
Sbjct: 190 EADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEY 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLER G S+K  
Sbjct: 250 FRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGASDK-- 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LAS+SRL    
Sbjct: 308 GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAI 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              ++++++     ++ +++    +  IG YR G D  +D A+  +  +  FLKQ   + 
Sbjct: 368 VPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEK 427

Query: 425 SSEDVFQEITKKLQ 438
           ++   ++E  ++L+
Sbjct: 428 TN---YEEAAQQLR 438


>gi|306485979|gb|ADM92638.1| AtpA [Franklinia alatamaha]
          Length = 505

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 180/428 (42%), Gaps = 20/428 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++      +     +   V+QGG           +  +      G+ V  +      +G
Sbjct: 11  IRERFGQYNKKVTMGNTGPVLQGGK------GIARIQGVGGE-RAGELVKFE---KGTIG 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
             + +  + V +   G G  I  G  V   G+  +I  S  + GRVINAL KPIDG   +
Sbjct: 61  IALNLESNNVGVVLRGDGLMIQKGISVKATGKIVQIPVSEAYLGRVINALAKPIDGRGEI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +
Sbjct: 121 SASESRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVAT 179

Query: 180 MFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +     VI     +G++   V + +  +        ++VV  T+D    L+ +AP 
Sbjct: 180 DTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPY 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T   +AEYF  +  + L+I D  ++ A + R+++      P    YP  VF    RLLER
Sbjct: 240 TGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 299

Query: 297 IGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
              S     +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 300 AAKSSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVG 359

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++   L   + +F E         +   +D      + +   + 
Sbjct: 360 ISVSRVGSAAQIKAMKQVAGKLKLELAQFAELE---AFAQFAFDLDKATQNQLARGQRLR 416

Query: 415 DFLKQSPS 422
           + LKQS S
Sbjct: 417 ELLKQSQS 424


>gi|15603357|ref|NP_246431.1| F0F1 ATP synthase subunit alpha [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|17371667|sp|Q9CKW2|ATPA_PASMU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|12721876|gb|AAK03576.1| AtpA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 513

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +      +  + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHSALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQYSPLS 440


>gi|218703514|ref|YP_002411033.1| lateral flagellar export/assembly protein [Escherichia coli UMN026]
 gi|293403344|ref|ZP_06647435.1| fliI [Escherichia coli FVEC1412]
 gi|298378956|ref|ZP_06988837.1| fliI [Escherichia coli FVEC1302]
 gi|218430611|emb|CAR11477.1| Flagellum-specific ATP synthase, Lateral flagellar export/assembly
           protein [Escherichia coli UMN026]
 gi|291429197|gb|EFF02217.1| fliI [Escherichia coli FVEC1412]
 gi|298280069|gb|EFI21573.1| fliI [Escherichia coli FVEC1302]
          Length = 445

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 230/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S D ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLDHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + ++ ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQDMREPAALELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|76789409|ref|YP_328495.1| type III secretion system ATPase [Chlamydia trachomatis A/HAR-13]
 gi|237803099|ref|YP_002888293.1| type III secretion system ATPase [Chlamydia trachomatis
           B/Jali20/OT]
 gi|237805020|ref|YP_002889174.1| type III secretion system ATPase [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|76167939|gb|AAX50947.1| SctN [Chlamydia trachomatis A/HAR-13]
 gi|231273320|emb|CAX10235.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274333|emb|CAX11128.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 442

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 159/434 (36%), Positives = 242/434 (55%), Gaps = 13/434 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDI 69
           + E     L    G I  +  +   +  +   V +G+  + +       + +V+    + 
Sbjct: 12  MTELPDVQLTAVVGRIIEVVGML--IKAVVPDVRVGEVCLVKRHGMEPLVTEVVGFTQNF 69

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSM 126
           V++ P+G    +S    V   G    I       GRV+N LG PID      L   D   
Sbjct: 70  VFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKGPLESVDAIY 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+LL M AR+  
Sbjct: 130 PIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSLLGMIARNAE 189

Query: 187 -FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREFI  D   + +K+SV+VV+TSD+S  LR  A      IAEY
Sbjct: 190 EADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEY 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLER G S+K  
Sbjct: 250 FRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGASDK-- 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LAS+SRL    
Sbjct: 308 GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAI 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              ++++++     ++ +++    +  IG YR G D  +D A+  +  +  FLKQ   + 
Sbjct: 368 VPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEK 427

Query: 425 SSEDVFQEITKKLQ 438
           ++   ++E  ++L+
Sbjct: 428 TN---YEEAAQQLR 438


>gi|289624378|ref|ZP_06457332.1| type III secretion component, putative [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|330868638|gb|EGH03347.1| type III secretion component [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 442

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 161/420 (38%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG       G     + ++ P   +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E         ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP    +G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGP--GPQGSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+    D   +   +L+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSSIEAFLRQPPSE---HDSLAQTLARLR 438


>gi|238853682|ref|ZP_04644050.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 202-4]
 gi|282851610|ref|ZP_06260975.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 224-1]
 gi|311110488|ref|ZP_07711885.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri MV-22]
 gi|238833720|gb|EEQ25989.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 202-4]
 gi|282557578|gb|EFB63175.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri 224-1]
 gi|311065642|gb|EFQ45982.1| ATP synthase F1, alpha subunit [Lactobacillus gasseri MV-22]
          Length = 503

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 178/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G ++ +         L+  +   + +     +    G    
Sbjct: 10  ALIKQQLEKYDDKLNVNEVGTVTYVGDGIARAHGLNNVLS-SELLQFSNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LEANDVGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L      
Sbjct: 125 KTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V+  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVKNSVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQATQAKLNRGRRTVEVLK 421

Query: 419 QSPS-DLSSED 428
           Q     L  ED
Sbjct: 422 QPLHKPLPVED 432


>gi|6561697|gb|AAF17041.1|AF197709_1 ATPase alpha subunit [Dioscorea sp. Qiu 94044]
          Length = 422

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSQSETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 406


>gi|89112858|gb|ABD61041.1| ATPase alpha subunit [Berberidopsis beckleri]
          Length = 431

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 357 QLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTELPKQPQ 410


>gi|27461591|gb|AAM95212.1| ATPase F1 alpha subunit [Mayaca sellowiana]
          Length = 418

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 93/412 (22%), Positives = 168/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTILNQKQMNSRGTNEFETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILTEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 405


>gi|315121817|ref|YP_004062306.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495219|gb|ADR51818.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 509

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 183/441 (41%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  +   ++ +     KN        + GY+ S+      V  L++ +   + V+     
Sbjct: 1   MDIHAAEVSDILRKRIKNFSNDSDFSEIGYVLSVGDGIARVYGLNK-IKAEEMVLFACG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  D V +  +G  ++IS GD+V   GR   +       GRV++ALG PID
Sbjct: 59  --VYGMAFSLEADNVGVIILGSDKDISEGDIVKRTGRIVDVPVGPELLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I +  P  + RQ V +   TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPIECKKKSC-IEANAPGIIQRQSVCEPLSTGIKAIDALIPIGLGQRELIIGDRKTGK 175

Query: 175 STLLSMFARSDC----------FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           ++++     +                I   +G++   V  F++          S+VV AT
Sbjct: 176 TSIILDAFLNQKTSHEKNVERDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVAAT 235

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   ++ +AP T  +I EYF   G + L+  D + + A + R+I+      P    YP
Sbjct: 236 ASDPVSMQVLAPFTGCSIGEYFRDNGYHALIAYDDLYKHAVAYRQISLLLRRSPGREAYP 295

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             +F    RLLER          G++TA+  +    ++ +  I  +V SI DG I L   
Sbjct: 296 GDIFYLHSRLLERAAKMSDALGGGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLETE 355

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P V+   SVSR+   A     K++  ++   + ++ E   +     +   +D+
Sbjct: 356 LFYQGIRPAVNIGLSVSRVGSAAQVKAMKQVSGAVKGDLAQYRE---MLSFAKFGSDLDV 412

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
                + +   + + LKQ   
Sbjct: 413 STQSFLSRGERLTELLKQPQF 433


>gi|315635261|ref|ZP_07890538.1| ATP synthase F1 sector alpha subunit [Aggregatibacter segnis ATCC
           33393]
 gi|315476007|gb|EFU66762.1| ATP synthase F1 sector alpha subunit [Aggregatibacter segnis ATCC
           33393]
          Length = 513

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V+      G I S++     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVESEARNTGTIVSVSDGIIRIHGLSE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFSPLS 440


>gi|238899339|ref|YP_002925022.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229467100|gb|ACQ68874.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 513

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 190/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L ++      +       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKERITQFNIVSEAHNEGTIISVSDGVIRIHGLTD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D     + +  D V    +G   +++ G  V   GR   +       GR++N LGKPID
Sbjct: 58  -DRYAIALNLERDSVGAVVMGSYIDLTEGMKVQCTGRILSVPVGHGLLGRIVNTLGKPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L     S  + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGTLNNQGFS-PVETIAPGVIERQSVDQPLQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDTIINQRDSEIKCVYVAIGQKASTIANVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVETFTQGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESGLFNAGIRPAVNPGISVSRVGGAAQTKVMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K ++    + + LKQ      S
Sbjct: 413 LDDSTRKQLNHGQKVTELLKQKQYAPLS 440


>gi|227876742|ref|ZP_03994851.1| H(+)-transporting two-sector ATPase [Mobiluncus mulieris ATCC
           35243]
 gi|269976269|ref|ZP_06183265.1| flagellum-specific ATP synthase [Mobiluncus mulieris 28-1]
 gi|306817689|ref|ZP_07451431.1| flagellar protein export ATPase FliI [Mobiluncus mulieris ATCC
           35239]
 gi|307699792|ref|ZP_07636843.1| ATPase FliI/YscN family protein [Mobiluncus mulieris FB024-16]
 gi|227842639|gb|EEJ52839.1| H(+)-transporting two-sector ATPase [Mobiluncus mulieris ATCC
           35243]
 gi|269935598|gb|EEZ92136.1| flagellum-specific ATP synthase [Mobiluncus mulieris 28-1]
 gi|304649503|gb|EFM46786.1| flagellar protein export ATPase FliI [Mobiluncus mulieris ATCC
           35239]
 gi|307614830|gb|EFN94048.1| ATPase FliI/YscN family protein [Mobiluncus mulieris FB024-16]
          Length = 441

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 168/418 (40%), Positives = 243/418 (58%), Gaps = 11/418 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S+  +   V  L   V  G+ V+  G  +    +V+ ++  +    P+   + +
Sbjct: 20  RVGEVESVVGLSVQVRGLDCRV--GEVVLV-GDGTGTPAEVVALDAGLASCMPLDNLDGL 76

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +G  V   G    +       GRVI+A G+PIDG   +   D  + I    P A+ R R
Sbjct: 77  RVGSPVRGTGLPATVPVGPALLGRVIDAAGRPIDGKGPIYVAD-HVPIHGSAPNALERAR 135

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           ++     G+RV+D    L  GQRIG+FAGSG+GKSTL+SM AR    +  +I+LVGERGR
Sbjct: 136 IDTPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIARGTNAEVCVIALVGERGR 195

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+ +D   + L +SVVVVATSDESP+LRK A  TA  +AEY+   G +VLL++DS+
Sbjct: 196 EVREFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRVAEYYRDAGRHVLLMMDSL 255

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR   + REI  + GE P  RGYP S FS + +LLER G      G++T + +VLVDGD+
Sbjct: 256 TRTCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAG--SGAVGSVTGIYTVLVDGDD 313

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HN+PIAD  RSILDGH+VL+R LA  G YP VD LAS+SR+A K  + ++K+  ++L  +
Sbjct: 314 HNEPIADQARSILDGHVVLDRKLAVAGHYPAVDALASISRVASKVCTREQKEAATALRQV 373

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +      +D+  +G Y+ G +  +D A+     I  FL Q   +      F E  ++L
Sbjct: 374 MGAKRGVQDLLDVGAYQQGTNPEVDLALQYDEEIEAFLTQKTDEKI---TFDEAWQQL 428


>gi|254228246|ref|ZP_04921675.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio sp. Ex25]
 gi|262394137|ref|YP_003285991.1| Type III secretion cytoplasmic ATP synthase [Vibrio sp. Ex25]
 gi|151939319|gb|EDN58148.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Vibrio sp. Ex25]
 gi|262337731|gb|ACY51526.1| Type III secretion cytoplasmic ATP synthase [Vibrio sp. Ex25]
          Length = 440

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 228/423 (53%), Gaps = 9/423 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 11  QQSAIRQTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G  ++ LG+P DG  S        
Sbjct: 69  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDQLLGTTLDGLGRPFDGTQSQEPS-AWY 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 128 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAD 187

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   + + KSV+VVATSD   + R  A   A +IAEYF
Sbjct: 188 VDVTVLALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYF 247

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 248 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 306 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             D +   + L  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + S
Sbjct: 366 EPDHQASAAHLREMLAKYEEVELLLKIGEYQHGADSRADMAIAQSDDIRAFLRQGTHEPS 425

Query: 426 SED 428
             D
Sbjct: 426 DLD 428


>gi|323181535|gb|EFZ66955.1| flagellum-specific ATP synthase [Escherichia coli 1357]
          Length = 445

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 154/425 (36%), Positives = 230/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQMCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|257790797|ref|YP_003181403.1| ATP synthase F1, alpha subunit [Eggerthella lenta DSM 2243]
 gi|257474694|gb|ACV55014.1| ATP synthase F1, alpha subunit [Eggerthella lenta DSM 2243]
          Length = 522

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 178/439 (40%), Gaps = 30/439 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-L 59
           ++K L+ L    E        + G +  I      V  L +    G+ +   G N     
Sbjct: 13  LRKQLDALNTSVES------REVGTVIQIGDGIARVDGL-KDAMAGELLEFVGSNGQTVY 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G    +  D V    +G    I   D V   GR    PS     GRV+N LG PIDG   
Sbjct: 66  GMAQNLEEDEVGAVLLGDVTAIKENDQVKTTGRIVEIPSGKEMLGRVVNPLGMPIDGKGP 125

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K +    +  K P  + RQ VE+  +TGI  ID   P+  GQR  +      GK+++ 
Sbjct: 126 I-KAEGMRPVEFKAPGVIQRQPVEEPMQTGILAIDSMIPIGRGQRELIIGDRQTGKTSIA 184

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +        I   +G++   V   +E          +++V A++ +S  L+ +AP
Sbjct: 185 VDAIINQKGKDMICIYVAIGQKASTVAGLVETLEKHGAMEYTIIVNASASDSAPLQYIAP 244

Query: 236 LTAVTIAEYFSS------------KGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +    I EYF               G +VL I D +++ A + R+++      P    YP
Sbjct: 245 MAGAAIGEYFMYNGENGQPATADNPGRHVLCIYDDLSKQAVAYRQMSLTLRRPPGREAYP 304

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             +F    RLLER      E G  ++TA+  +     + +  I  +V SI DG I L+  
Sbjct: 305 GDIFYLHSRLLERAVKMSDEYGAGSLTALPMIETQAGDVSAYIPTNVISITDGQIFLSTD 364

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G+ P V+   SVSR+   A     K++  +L   +  + E +       +   +D 
Sbjct: 365 LFFQGQRPAVNVGISVSRVGGSAQVKAMKQVAGTLRLDLASYRELQ---AFTQFGSDLDK 421

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                +++   + + LKQ 
Sbjct: 422 STQDQLNRGAHMTELLKQG 440


>gi|317488491|ref|ZP_07947042.1| ATP synthase F1 [Eggerthella sp. 1_3_56FAA]
 gi|325832063|ref|ZP_08165160.1| ATP synthase F1, alpha subunit [Eggerthella sp. HGA1]
 gi|316912423|gb|EFV33981.1| ATP synthase F1 [Eggerthella sp. 1_3_56FAA]
 gi|325486384|gb|EGC88836.1| ATP synthase F1, alpha subunit [Eggerthella sp. HGA1]
          Length = 522

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 178/439 (40%), Gaps = 30/439 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-L 59
           ++K L+ L    E        + G +  I      V  L +    G+ +   G N     
Sbjct: 13  LRKQLDALNTSVES------REVGTVIQIGDGIARVDGL-KDAMAGELLEFVGSNGQTVY 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G    +  D V    +G    I   D V   GR    PS     GRV+N LG PIDG   
Sbjct: 66  GMAQNLEEDEVGAVLLGDVTAIKENDQVKTTGRIVEIPSGKEMLGRVVNPLGMPIDGKGP 125

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K +    +  K P  + RQ VE+  +TGI  ID   P+  GQR  +      GK+++ 
Sbjct: 126 I-KAEGMRPVEFKAPGVIQRQPVEEPMQTGILAIDSMIPIGRGQRELIIGDRQTGKTSIA 184

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +        I   +G++   V   +E          +++V A++ +S  L+ +AP
Sbjct: 185 VDAIINQKGKDMICIYVAIGQKASTVAGLVETLEKHGAMEYTIIVNASASDSAPLQYIAP 244

Query: 236 LTAVTIAEYFSS------------KGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +    I EYF               G +VL I D +++ A + R+++      P    YP
Sbjct: 245 MAGAAIGEYFMYNGENGQPATADNPGRHVLCIYDDLSKQAVAYRQMSLTLRRPPGREAYP 304

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             +F    RLLER      E G  ++TA+  +     + +  I  +V SI DG I L+  
Sbjct: 305 GDIFYLHSRLLERAVKMSDEYGAGSLTALPMIETQAGDVSAYIPTNVISITDGQIFLSTD 364

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G+ P V+   SVSR+   A     K++  +L   +  + E +       +   +D 
Sbjct: 365 LFFQGQRPAVNVGISVSRVGGSAQVKAMKQVAGTLRLDLASYRELQ---AFTQFGSDLDK 421

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                +++   + + LKQ 
Sbjct: 422 STQDQLNRGAHMTELLKQG 440


>gi|57868914|gb|AAW57453.1| ATP synthase alpha subunit [Bruinsmia styracoides]
          Length = 397

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 169/405 (41%), Gaps = 23/405 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           ++  SL   + ++ E   +     +   +D      +++   + +
Sbjct: 356 QVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 397


>gi|148988554|ref|ZP_01819987.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP6-BS73]
 gi|169833419|ref|YP_001694916.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           Hungary19A-6]
 gi|307127714|ref|YP_003879745.1| ATP synthase F1 subunit alpha [Streptococcus pneumoniae 670-6B]
 gi|226739947|sp|B1ICT1|ATPA_STRPI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|147925755|gb|EDK76830.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae SP6-BS73]
 gi|168995921|gb|ACA36533.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae
           Hungary19A-6]
 gi|306484776|gb|ADM91645.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae 670-6B]
 gi|332074260|gb|EGI84737.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA17545]
          Length = 501

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|332073844|gb|EGI84322.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA41301]
          Length = 501

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L +    G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENAMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|164685650|gb|ABY66771.1| atp1 [Tamarix parviflora]
          Length = 413

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 171/407 (42%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSDSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + +  KQ+ 
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQAQ 399


>gi|166154011|ref|YP_001654129.1| type III secretion system ATPase [Chlamydia trachomatis 434/Bu]
 gi|301335211|ref|ZP_07223455.1| type III secretion system ATPase [Chlamydia trachomatis L2tet1]
 gi|165929999|emb|CAP03482.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis
           434/Bu]
          Length = 442

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 158/434 (36%), Positives = 242/434 (55%), Gaps = 13/434 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDI 69
           + E     L    G I  +  +   +  +   V +G+  + +       + +V+    + 
Sbjct: 12  MTELPDVQLTAVVGRIIEVVGML--IKAVVPDVRVGEVCLVKRHGMEPLVTEVVGFTQNF 69

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSM 126
           V++ P+G    +S    V   G    I       GRV+N LG PID      L   D   
Sbjct: 70  VFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKGPLENVDAIY 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+LL M AR+  
Sbjct: 130 PIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSLLGMIARNAE 189

Query: 187 -FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREFI  D   + +K+S++VV+TSD+S  LR  A      IAEY
Sbjct: 190 EADINVIALIGERGREVREFIENDLGEEGMKRSIIVVSTSDQSSQLRLNAAYVGTAIAEY 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLER G S+K  
Sbjct: 250 FRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGASDK-- 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LAS+SRL    
Sbjct: 308 GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAI 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              ++++++     ++ +++    +  IG YR G D  +D A+  +  +  FLKQ   + 
Sbjct: 368 VPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEK 427

Query: 425 SSEDVFQEITKKLQ 438
           ++   ++E  ++L+
Sbjct: 428 TN---YEEAAQQLR 438


>gi|57115575|gb|AAW33094.1| F1-ATPase alpha subunit [Aesculus californica]
          Length = 424

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER          G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|330985212|gb|EGH83315.1| type III secretion component [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331008648|gb|EGH88704.1| type III secretion component [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 442

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 161/420 (38%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG       G     + ++ P   +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E         ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP    +G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGP--GPQGSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+    D   +   +L+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSE---HDSLAQTLARLR 438


>gi|134300244|ref|YP_001113740.1| flagellar protein export ATPase FliI [Desulfotomaculum reducens
           MI-1]
 gi|134052944|gb|ABO50915.1| type III secretion system ATPase, FliI/YscN [Desulfotomaculum
           reducens MI-1]
          Length = 442

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 160/416 (38%), Positives = 232/416 (55%), Gaps = 9/416 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICP 74
             ++   G ++ +  +   V  ++    +G+    V QG+      +V+        + P
Sbjct: 19  ARVIKPIGKVTRVIGLMIEVQGIT--ARIGEVCDIVAQGEPEPVRAEVVGFRDQFSLLMP 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G    I  G  V   G    I       G+V++ LG+PID       G     + +K P
Sbjct: 77  LGELRGIYPGCAVIPSGHNLTIKVGKHLQGKVLDGLGRPIDKTVDYASG-QEFLVDNKPP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R++    TG+R +D       GQRIG+FAGSG+GKSTLL M AR    D  +I+
Sbjct: 136 NPLKRKRIDSVLPTGVRAVDALLTCGKGQRIGIFAGSGVGKSTLLGMIARHGSADVNVIA 195

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EF+E+ LG     +SV+V ATSD+  ++R      A  IAEYF  +G +V
Sbjct: 196 LIGERGREVLEFLEEDLGPQGMARSVIVAATSDQPALVRLKGAFVATAIAEYFRDQGLDV 255

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           +L++DS+TRFA + RE+    GE P  +GY  SVF+ LP+LLER G    ++G+ITA  +
Sbjct: 256 MLMMDSVTRFAMAQREVGLAVGEPPATKGYTPSVFALLPKLLERSGM--GQQGSITAFYT 313

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N+PIAD+VR ILDGHIVL R LA    YP +D L SVSRL     S   K  
Sbjct: 314 VLVDGDDLNEPIADAVRGILDGHIVLTRKLASANHYPAIDVLQSVSRLMPDIASDQHKNQ 373

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             +L  L+  ++E+ D+  IG Y  G +  +D A+ +   I  +L+QSP + SS +
Sbjct: 374 AGNLRDLLATYQESEDLINIGAYVLGSNPKIDHAISKHDEIIGYLRQSPLEYSSYE 429


>gi|294496835|ref|YP_003560532.1| type III secretion system ATPase [Yersinia pestis Z176003]
 gi|322836566|ref|YP_004210062.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis Java 9]
 gi|262363846|gb|ACY60566.1| type III secretion system ATPase [Yersinia pestis D106004]
 gi|262364003|gb|ACY64340.1| type III secretion system ATPase [Yersinia pestis D182038]
 gi|294352423|gb|ADE66480.1| type III secretion system ATPase [Yersinia pestis Z176003]
 gi|321161340|gb|ADW67046.1| type III secretion apparatus H+-transporting two-sector ATPase YscN
           [Yersinia pestis Java 9]
          Length = 410

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 158/405 (39%), Positives = 226/405 (55%), Gaps = 10/405 (2%)

Query: 38  CLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-R 94
            +   V +G+    +  ++      +VI        + P+G    IS    V   G   +
Sbjct: 8   AVVPGVRIGELCYLRNPDNSLSLQAEVIGFAQHQALLIPLGEMYGISSNTEVSPTGTMHQ 67

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +       G+V++ LG+P DG   L +      +    P  M+R+ +      GIRVID 
Sbjct: 68  VGVGEHLLGQVLDGLGQPFDG-GHLPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDG 126

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDN 213
                 GQR+G+FA +G GKSTLL+   RS   D  +++L+GERGREVREFIE D   + 
Sbjct: 127 LLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEG 186

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
           L+K+V+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+TRFA + REI   +
Sbjct: 187 LRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 246

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  RGYP SVF+ LPRL+ER G S K  G+ITA+ +VLV+GD+  +P+AD  RSILD
Sbjct: 247 GEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILD 304

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHI+L+R LA    YP +D L S SR+ ++  S + K     L  L+ ++EE   +  IG
Sbjct: 305 GHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIG 364

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            Y+ G D   D+A+ ++  I  +L Q   +LS    F E    L+
Sbjct: 365 EYQKGQDKEADQAIERMGAIRGWLCQGTHELSH---FNETLNLLE 406


>gi|237809869|ref|YP_002894309.1| F0F1 ATP synthase subunit alpha [Tolumonas auensis DSM 9187]
 gi|259585439|sp|C4LDW2|ATPA_TOLAT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|237502130|gb|ACQ94723.1| ATP synthase F1, alpha subunit [Tolumonas auensis DSM 9187]
          Length = 513

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 190/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +               G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKKRIAQFNVVTEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            ++ G  + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NSYGLALNLERDSVGAIVMGPYTDLAEGQKVTGTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  + RQ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-ENDGFAPVEVIAPGVIERQSVSQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNTDYVEAFTKGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 TTQLFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K ++    + + +KQ  
Sbjct: 413 LDDATRKQLNHGQKVTELMKQKQ 435


>gi|57115591|gb|AAW33102.1| F1-ATPase alpha subunit [Plantago media]
          Length = 407

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 101/402 (25%), Positives = 172/402 (42%), Gaps = 23/402 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V      S   G  + +  + V I   G   EI  GDLV   G   
Sbjct: 1   RVYGL-KDIQAGEMVEFA---SAVKGIALNLENENVGIVVFGNDTEIQEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ LG PIDG  SLG  +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKTLLGRVVDGLGLPIDGKGSLGTHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   VG++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNAKAASEKEKLYCVYVAVGQKRSTV 175

Query: 203 REFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +T+
Sbjct: 176 AQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDHGMHALIIYDDLTK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   
Sbjct: 296 VSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D      +++   + + LKQS 
Sbjct: 356 LAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQSQ 394


>gi|322835100|ref|YP_004215127.1| ATP synthase F1 subunit alpha [Rahnella sp. Y9602]
 gi|321170301|gb|ADW76000.1| ATP synthase F1, alpha subunit [Rahnella sp. Y9602]
          Length = 513

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-EHDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K ++    + + LKQ  
Sbjct: 413 LDEATRKQLNHGQKVTELLKQKQ 435


>gi|227832898|ref|YP_002834605.1| ATP synthase alpha chain [Corynebacterium aurimucosum ATCC 700975]
 gi|262182613|ref|ZP_06042034.1| F0F1 ATP synthase subunit alpha [Corynebacterium aurimucosum ATCC
           700975]
 gi|254807690|sp|C3PFR3|ATPA_CORA7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|227453914|gb|ACP32667.1| ATP synthase alpha chain [Corynebacterium aurimucosum ATCC 700975]
          Length = 546

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 190/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ + + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 65  VAQNLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDGMGPI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 TAEEDRV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +             + + +V A + ++ 
Sbjct: 184 DTILNQKANWESGDKNKQVRCIYVAIGQKGSTIAGVRHTLEQHGALEYTTIVAAPASDAA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFSGAALGQHWMYQGNHVLIIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLELAAY---RDLQAFAAFASDLDPASKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQS S     +
Sbjct: 421 LERGERLVELLKQSESSPQPVE 442


>gi|169303174|gb|ACA53184.1| ATP synthase alpha subunit [Callithamnion pikeanum]
          Length = 404

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 97/404 (24%), Positives = 164/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L      G+ +         +G  + +  D V +  +G G 
Sbjct: 7   VTNVGSVLQVGDGIARVYGL-DAAMAGELLQFD-DQEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID   +    D  + I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGEEFLGRVVNPLAEPIDAKGTPNSSDTRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF  KG   L+I
Sbjct: 184 QKASSVAQVVSVLEERGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYKGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSDLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|98986468|gb|ABF60012.1| ATPase alpha subunit [Elodea sp. Duvall s.n.]
          Length = 392

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 97/393 (24%), Positives = 170/393 (43%), Gaps = 21/393 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 3   GEMVEF---SSGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 60  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDSLVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          L+  A+ +     +   +G++   V + ++     N 
Sbjct: 119 LIIGDRQTGKTAIAVDTILNQKELNAKAKENEKLYCVYVAIGQKRSTVAQLVQILSSANA 178

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
            + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 179 LEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 238

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER     +E   G++TA+  +     + +  I  +V SI
Sbjct: 239 RRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVSAYIPTNVISI 298

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 299 TDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAA 355

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +   +D      +++   + + LKQ   + 
Sbjct: 356 FAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 388


>gi|57868896|gb|AAW57444.1| ATP synthase alpha subunit [Cantua buxifolia]
          Length = 396

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/404 (23%), Positives = 168/404 (41%), Gaps = 21/404 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGRAMLGRVVDALGLPIDGRGALSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISL 194
             +TG++ +D   P+  GQR  +      GK+ +      +               +   
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRSESETLYCVYVA 175

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V + ++     N  + S++V ATS +   L+ +AP +   + EYF   G + L
Sbjct: 176 IGQKRSTVAQLVQILSEANALEYSILVAATSSDPAPLQFLAPYSGCAMGEYFRDNGMHAL 235

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVI 311
           +I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+ 
Sbjct: 236 IIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALP 295

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K+
Sbjct: 296 VIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQ 355

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           +  SL   + ++ E   +     +   +D      +++   + +
Sbjct: 356 VCGSLKLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTE 396


>gi|284007158|emb|CBA72440.1| flagellum-specific ATP synthase FliI [Arsenophonus nasoniae]
          Length = 463

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 161/454 (35%), Positives = 240/454 (52%), Gaps = 18/454 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQG 53
           M   L       + + K L     V   G ++ +T +    T L   +     +   HQ 
Sbjct: 3   MTAKLARWLGQIDSFEKQLSQLAPVRHYGKLTRVTGLVLEATGLQMPLGANCLIKRQHQP 62

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH--------WGRFRISPSACWCGRV 105
            + +   +V+  N   + + P      I  G  V+H            +        GRV
Sbjct: 63  ASDEISCEVVGFNGHKMLLMPYQDLAGIVPGAQVYHPATADKQQNSSQQFPLGPALLGRV 122

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           ++  G+P+DG  SL   D    +++     + R  +      G+R I+    +  GQR+G
Sbjct: 123 LDGFGEPLDGK-SLPTTDCHASLVTAPINPLQRAPINHPLDVGVRAINSLLTVGRGQRMG 181

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATS 224
           +FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L++SVV+ A +
Sbjct: 182 LFAGSGVGKSMLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGLQRSVVIAAPA 241

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           D SP+LR      A  IAE F  +G NVLLI+DS+TR+A + REIA   GE P  +GYP 
Sbjct: 242 DVSPLLRLQGATYATRIAEDFRDRGLNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPP 301

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE
Sbjct: 302 SVFAKLPTLIERAGNGIQGSGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRTLAE 361

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G YP +D  AS+SR  +                L+ R++  +D+  +G Y  G D ILD
Sbjct: 362 SGHYPAIDIEASISRAMNSLVDKSHLYQAQQFKQLLSRYQRNQDLINVGAYAVGSDPILD 421

Query: 405 KAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           +A+   P +  FL+Q   +  S E  +Q++ +  
Sbjct: 422 QAIQLYPHLQQFLRQDCDEYCSKESAYQQLCQLF 455


>gi|253702505|ref|YP_003023694.1| ATPase, FliI/YscN family [Geobacter sp. M21]
 gi|251777355|gb|ACT19936.1| ATPase, FliI/YscN family [Geobacter sp. M21]
          Length = 434

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 154/422 (36%), Positives = 232/422 (54%), Gaps = 11/422 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++ +  +   +        +G       +    +  +V+    +   + P+G  
Sbjct: 17  VRFHGKVTQVVGLV--IEGYCPETAVGSVCEVHSEGHAPIPAEVVGFRENKTLLMPLGEL 74

Query: 79  EEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             + LG ++     +  +       GRVI+ LG+PID    +   D    I +     M 
Sbjct: 75  RGVGLGSVISVRREKAALGVGPALLGRVIDGLGQPIDDKGPIEVAD-EYPIYALPVNPMK 133

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ + K    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+GE
Sbjct: 134 RRPIRKPLNLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGE 193

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE+REFI +D   + L+KSVVVVATSD+ P++R      A TIAEYF ++G  VLL++
Sbjct: 194 RGRELREFIEKDLQKEGLRKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLMM 253

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS TRFA ++RE+    GE P  +GY  SVF+ LPRLLER G    + G+IT + +VLV+
Sbjct: 254 DSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPRLLERTGNF--QGGSITGLYTVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI+D++RSILDGHI+L R LA    YPP+D + S SR+     + + + L    
Sbjct: 312 GDDFNEPISDAMRSILDGHIILTRELAARNIYPPIDLMNSASRVMSDVATKEHRALAGRF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  + +  D+  IG Y+ G +  +D AV ++  +  +LKQ   D+  E  F+E    
Sbjct: 372 KELLATYRQAEDMINIGAYKSGSNPKIDYAVAKMEQMIGYLKQ---DVGDEVNFEESIAA 428

Query: 437 LQ 438
           L+
Sbjct: 429 LE 430


>gi|160902822|ref|YP_001568403.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95]
 gi|160360466|gb|ABX32080.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95]
          Length = 442

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 167/417 (40%), Positives = 244/417 (58%), Gaps = 12/417 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G IS I  V  T+  +   V LGD    +    S    + +  + + V + P+     I 
Sbjct: 27  GKISRIVGV--TIESIGPSVALGDLCRIKLKDGSKIFAETVGFSDNKVLLMPLEDVSGIY 84

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           +G  V     +  +  S+   G V++ LG+ +DG  S  K   S  I    P  + R R+
Sbjct: 85  VGAPVERVDSKINVKISSDLLGHVLDGLGRSMDG--SKVKSYESKSIYRSAPNPLLRNRI 142

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++    G+R ID F  L  GQRIG+ AGSG+GKSTLL M AR+   D  +I L+GERGRE
Sbjct: 143 KEPLSVGVRAIDAFLTLGKGQRIGIMAGSGVGKSTLLGMIARNTEADINVIGLIGERGRE 202

Query: 202 VREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V++FI +D   + LKKSV++V+TSD   +LR  A  TA TIAEYF   G NVL+++DSIT
Sbjct: 203 VKDFIEKDLGEEGLKKSVLIVSTSDSPALLRVKALYTATTIAEYFRDLGYNVLMMVDSIT 262

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + REI  + GE P  RGY  SVF+ +P++LER G S+K  G++TA+ +VLV+ D+ 
Sbjct: 263 RWAMAQREIGLSIGEPPTTRGYTPSVFANMPKILERAGNSQK--GSMTAIYTVLVEADDM 320

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDPI D+VRSI+DGHIVL+RSLA+   YPP+D L+SVSRL  +       K    +  + 
Sbjct: 321 NDPIGDAVRSIVDGHIVLSRSLADSSHYPPIDILSSVSRLMKEVVDEKHLKAAMFIRDIY 380

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +  ++D+  +G Y+ G +  +D A+ ++  I +FL Q   + +    F++  KKL
Sbjct: 381 ASYMNSKDLIEVGAYKKGSNKKVDIALEEIENINNFLTQRIEEKA---PFEQTLKKL 434


>gi|3273584|gb|AAC24774.1| F1-ATPase alpha subunit [Flagellaria indica]
          Length = 421

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLHE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILGEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|27461567|gb|AAM95200.1| ATPase F1 alpha subunit [Typha latifolia]
          Length = 417

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 167/408 (40%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLYCVYVAIG 176

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 177 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|149029485|gb|EDL84699.1| ATP synthase, H+ transporting, mitochondrial F1 complex, alpha
           subunit, isoform 1, isoform CRA_f [Rattus norvegicus]
          Length = 459

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 167/376 (44%), Gaps = 18/376 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G  + I  GD+V   G    +       GRV++ALG  IDG   
Sbjct: 10  GMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGP 69

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           +G   +   +  K P  + R  V +  +TGI+ +D   P+  GQR  +      GK    
Sbjct: 70  VG-SKIRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIA 128

Query: 175 -STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
             T+++    +D  D       I   +G++   V + ++     D +K ++VV AT+ ++
Sbjct: 129 IDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDA 188

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +  ++ EYF   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 189 APLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 248

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER          G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 249 YLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 308

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   K++  ++   + ++ E   +     +   +D    +
Sbjct: 309 GIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQ 365

Query: 406 AVHQVPIIYDFLKQSP 421
            + +   + + LKQ  
Sbjct: 366 LLSRGVRLTELLKQGQ 381


>gi|307262137|ref|ZP_07543788.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306868114|gb|EFM99939.1| ATP synthase subunit alpha [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 513

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 188/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMSVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVERFTNGAVKSQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKAIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|42518863|ref|NP_964793.1| F0F1 ATP synthase subunit alpha [Lactobacillus johnsonii NCC 533]
 gi|268319741|ref|YP_003293397.1| ATP synthase F1, alpha subunit [Lactobacillus johnsonii FI9785]
 gi|81667994|sp|Q74K17|ATPA_LACJO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|41583149|gb|AAS08759.1| ATP synthase alpha chain [Lactobacillus johnsonii NCC 533]
 gi|262398116|emb|CAX67130.1| ATP synthase F1, alpha subunit [Lactobacillus johnsonii FI9785]
          Length = 503

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 178/431 (41%), Gaps = 16/431 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G ++ +         L+  +   + +     +    G    
Sbjct: 10  ALIKQQLEKYDDKLNVNEVGTVTYVGDGIARAHGLNNVLS-SELLQFSNGS---YGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LEANDVGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ L      
Sbjct: 125 KTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTALALDTII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V+  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVKNSVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + REI+      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 305 NKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAINAGESVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      +++     + LK
Sbjct: 365 RVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQATQAKLNRGRRTVEVLK 421

Query: 419 QSPS-DLSSED 428
           Q     L  ED
Sbjct: 422 QPLHKPLPVED 432


>gi|330445369|ref|ZP_08309021.1| flagellar protein export ATPase FliI [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489560|dbj|GAA03518.1| flagellar protein export ATPase FliI [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 440

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 239/432 (55%), Gaps = 5/432 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L++   + +    V  G +  +     T+  +     +G     +  N D   +V+  
Sbjct: 7   ERLSRFKTEGTGCKPVASGRLVRVVG--LTLEAVGCRAPVGSLCKVETLNGDLEAEVVGF 64

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + + +++ P    + +  G  V        +       GRVI+ +G P+DG   +   + 
Sbjct: 65  SGETLFLMPSEQLQGVMPGAKVTPILHNSGLPVGPELLGRVIDGVGNPLDGLGPIF-TEQ 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                +     ++R+ +++    GI+ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 124 RASFNAIPINPLSRKPIKEPLDVGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRG 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFI++ LG +   +SVVV A +D SP++R     T++TIAE
Sbjct: 184 TSAQIVVVGLIGERGREVKEFIDEILGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G   + 
Sbjct: 244 YFRDQGFDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNEN 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+   
Sbjct: 304 QGSITAFFTVLSEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPA 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P +  +L+Q+  +
Sbjct: 364 IVSEEHMLMSKAVRQILSICRKNQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQTMKE 423

Query: 424 LSSEDVFQEITK 435
               ++   + +
Sbjct: 424 SVPYEMCINMLR 435


>gi|228016115|gb|ACP50952.1| ATP synthase CF1 alpha subunit [Pinus sibirica]
          Length = 507

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKXXXXXXE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|253997696|ref|YP_003049760.1| ATP synthase F1 subunit alpha [Methylotenera mobilis JLW8]
 gi|253984375|gb|ACT49233.1| ATP synthase F1, alpha subunit [Methylotenera mobilis JLW8]
          Length = 513

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   +++L +   +N          G + S+T     +  LS  V  G+ +   G  
Sbjct: 1   MQLSTSEISELIKSRLENFSTSAEARTQGTVISVTDGIVRIHGLS-NVMAGEMIEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I+ GD     GR   +       GRV+NALG+PID
Sbjct: 58  -NTFGLALNLERDSVGAVVLGDYEHITEGDTCKCTGRILEVPVGPELVGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+ +I    P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 117 GKGPVN-AKLTDKIEKVAPGVIARKSVSQPVQTGLKSVDSMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   +   +     +     ++VV A++ +S  L+
Sbjct: 176 TAVAVDAIINQKGQNMTCIYVAIGQKASTIANVVRKLEENGAMEYTIVVAASASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYAGCTMGEYFRDRGQDALIVYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGEVKGKTGSLTALPVIETAAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGVRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K + +  +  + +KQ+     S
Sbjct: 413 LDEATRKQLDRGRMFTELMKQAQYAPLS 440


>gi|89898777|ref|YP_515887.1| type III secretion system ATPase [Chlamydophila felis Fe/C-56]
 gi|89332149|dbj|BAE81742.1| type III secretory flagellar biosynthesis ATP synthase
           [Chlamydophila felis Fe/C-56]
          Length = 442

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 162/444 (36%), Positives = 252/444 (56%), Gaps = 15/444 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           +  N +TL     D     VV  G I+ +  +   +  +   V +G+  + + +     +
Sbjct: 4   LTTNFDTLMSQLNDVRLTTVV--GRITEVVGML--IKAVVPDVRVGEVCLVKRQGMEPLV 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--D 116
            +V+       ++ P+G    +S    V   G    I       GRV+N LG+PID    
Sbjct: 60  TEVVGFTQHFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEIK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   + +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS+
Sbjct: 120 GPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179

Query: 177 LLSMFARSDC-FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           LL M AR+    D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLL 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D L
Sbjct: 300 ERSGASDK--GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVL 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  + 
Sbjct: 358 ASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDRGVDFAIDHIDKLN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FLKQ   + ++   ++E +++L+
Sbjct: 418 RFLKQDIHEKTN---YEEASQQLR 438


>gi|89112832|gb|ABD61028.1| ATPase alpha subunit [Heuchera sp. Qiu 95076]
          Length = 436

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 96/422 (22%), Positives = 174/422 (41%), Gaps = 23/422 (5%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           Y+K  V + G + S+      V  L++ +  G+ V      S   G  + +  + V I  
Sbjct: 1   YAKFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVV 56

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
            G    I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P
Sbjct: 57  FGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAP 115

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----- 188
             + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +         
Sbjct: 116 GIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRAT 175

Query: 189 ------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
                   +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   +
Sbjct: 176 SESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAM 235

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER     
Sbjct: 236 GEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRS 295

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G++TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR
Sbjct: 296 DQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  S    + ++ E   +  +  +   +D       ++   + +  KQ
Sbjct: 356 VGSAAQLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQ 412

Query: 420 SP 421
             
Sbjct: 413 PQ 414


>gi|300114780|ref|YP_003761355.1| flagellar protein export ATPase FliI [Nitrosococcus watsonii C-113]
 gi|299540717|gb|ADJ29034.1| flagellar protein export ATPase FliI [Nitrosococcus watsonii C-113]
          Length = 480

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 152/443 (34%), Positives = 241/443 (54%), Gaps = 11/443 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG 60
           Q  L    +     +  LV   G ++ +     T+  +   + +G    + + +      
Sbjct: 16  QHALAGCRERLARDAAPLVTVEGRLTRMVG--LTLEAVGCQLPVGGRCHILRQERLPVEA 73

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV---FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           +V+    + +++ P+G    +     V    H GR   +      GRV++  G+P+D   
Sbjct: 74  EVVGFAGERLFLMPIGDPRGLVPNAPVIPLRHGGRM--AVGEALLGRVLDGGGRPLDDLG 131

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L +    + +  +    + RQ + +    G+  I+    +  GQR+G+FAGSG+GKS L
Sbjct: 132 PL-RATHRVSLEGQPINPLARQPIREPMDVGVAAINALLTIGRGQRMGLFAGSGVGKSVL 190

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ L+GERGREV+EFIE+ LG + L +SVVV   +D SP++R    +
Sbjct: 191 LGMMTRYAKADVIVVGLIGERGREVQEFIENILGKEGLARSVVVATPADHSPLMRIHGAM 250

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G  VLL++DS+TRF H+ RE+A   GE P  RGYP SVF+++P+LLER
Sbjct: 251 LATSIAEYFRDQGKQVLLLMDSLTRFGHAQRELALAIGEPPATRGYPPSVFAKIPQLLER 310

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G      G+ITA  +VL +GD+ NDP+ADS R+ILDGHIVL+R LAE G YP +D  AS
Sbjct: 311 AGNGRSGSGSITAFYTVLTEGDDPNDPVADSARAILDGHIVLSRRLAEAGHYPAIDIEAS 370

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +    + ++       +   + + +D+  +G Y  G D  LD+AV + P    F
Sbjct: 371 ISRVMSQITVPEHQQAAQQFKQIYSLYSQNQDLISVGAYSRGSDSRLDEAVDKQPQFRSF 430

Query: 417 LKQSPS-DLSSEDVFQEITKKLQ 438
           L+Q  S   S E+  + + + L+
Sbjct: 431 LQQDMSRSFSVEESLERLQQALK 453


>gi|312194820|ref|YP_004014881.1| ATP synthase F1 subunit alpha [Frankia sp. EuI1c]
 gi|311226156|gb|ADP79011.1| ATP synthase F1, alpha subunit [Frankia sp. EuI1c]
          Length = 552

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/448 (22%), Positives = 179/448 (39%), Gaps = 28/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV------QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           +    E +     DY ++         + G +         V  L  +    + +   G 
Sbjct: 4   LTIRPEEIRDALRDYVESFEATSADREEVGRVILTGDGIARVEGL-PHAMTNELLEFHGG 62

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
               LG  + + +  +    +G G  I  G  V   GR   +     + GRV++ LG+PI
Sbjct: 63  ---VLGLALNLEVGEIGCVILGEGSHIEEGQEVRRTGRILSVPVGDGYLGRVVDPLGRPI 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   +    +  + P  + RQ V++  +TGI+ ID  T +  GQR  +      G
Sbjct: 120 DGLGPV-ATEGERALELQAPTVVQRQPVKEPLQTGIKAIDAMTAIGRGQRQLIIGDRQTG 178

Query: 174 KST-----LLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           K+T     +++  A  +  D     K +   VG++   +RE +           + +V A
Sbjct: 179 KTTVAIDAIINQRANWESGDPKKQVKCVYVAVGQKKSTIREVVNTLEEAGALAYTTIVAA 238

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +DE    + +AP +   IA+++   G + L++ D +++ A + R I+      P    Y
Sbjct: 239 PADEPAGFKYIAPYSGSAIAQHWMYNGQHSLIVFDDLSKQAEAYRAISLLLRRPPGREAY 298

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E   G++T +  +   G + +  I  +V SI DG I L  
Sbjct: 299 PGDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKGSDISAYIPTNVISITDGQIFLES 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A     K +   L   + ++ E         +   +D
Sbjct: 359 DLFNQGVRPAINVGTSVSRVGGSAQVKAVKSVAGRLRLDLAQYRELE---AFSAFGSDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +   + + LKQ  +     D
Sbjct: 416 KASRDQLARGSRLVELLKQPQNQPYPVD 443


>gi|270264092|ref|ZP_06192359.1| ATP synthase subunit alpha [Serratia odorifera 4Rx13]
 gi|270041741|gb|EFA14838.1| ATP synthase subunit alpha [Serratia odorifera 4Rx13]
          Length = 513

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPVD-NDGFSPVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|302382319|ref|YP_003818142.1| ATPase, FliI/YscN family [Brevundimonas subvibrioides ATCC 15264]
 gi|302192947|gb|ADL00519.1| ATPase, FliI/YscN family [Brevundimonas subvibrioides ATCC 15264]
          Length = 446

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 162/427 (37%), Positives = 239/427 (55%), Gaps = 9/427 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           V  G ++ ++ +          + +G       + +  L  +V+        + P G  E
Sbjct: 15  VVTGKVAGVSGLLIEAKGGLSRLAVGARAEIGRRGTTPLPAEVVGFRDSKALLMPFGPVE 74

Query: 80  EISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G  +   G+     P+  W GR+I+A G+PIDG   L +G     + +  P A +R
Sbjct: 75  GVAPGADIHIIGQAAAVYPTTAWLGRIIDAFGQPIDGKGPLPQGPAPYPLRAAPPAAHSR 134

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            RV +    G+R +D+FT  C GQR+G+FAGSG+GKS LLSM AR    D V++ L+GER
Sbjct: 135 GRVGERLDLGVRSMDVFTTTCRGQRLGIFAGSGVGKSVLLSMLARQATCDAVVVGLIGER 194

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFIE+    + L++++VVVATSDE  + R+ A    + I+EY   +   VL ++D
Sbjct: 195 GREVREFIEETLGEEGLRRAIVVVATSDEPALKRRQAAYMTMAISEYLRDQDLEVLCLMD 254

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVIS 312
           S+TRFA + REI   +GE P  +GY  +VFSELP+LLER GP            ITA+ +
Sbjct: 255 SVTRFAMAQREIGLAAGEPPTTKGYTPTVFSELPKLLERAGPGPIRPDGTTAAPITAMFT 314

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDG +H++PIAD+VR ILDGHIV++R +AE GR+P +D L SVSR      +  E++L
Sbjct: 315 VLVDGGDHDEPIADAVRGILDGHIVMDRKIAERGRFPAIDVLKSVSRTLPGCQTPPEREL 374

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQ 431
                  +  +    ++  IG YR G D I D+A+   P +  FL Q   D++   D F 
Sbjct: 375 NRRARQCLSAYSSMEELIKIGAYRAGADPITDRAIALNPALEAFLGQDKDDVTRMADSFN 434

Query: 432 EITKKLQ 438
            +   L 
Sbjct: 435 RLESILN 441


>gi|332522898|ref|ZP_08399150.1| ATP synthase F1, alpha subunit [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314162|gb|EGJ27147.1| ATP synthase F1, alpha subunit [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 501

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 174/428 (40%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    + I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETSDIGIIILGDFSTIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ATTGFR-PVEAVAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTAVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQEDLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|89112866|gb|ABD61045.1| ATPase alpha subunit [Nepenthes sp. 'Kosobe']
          Length = 431

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G    +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|300174067|ref|YP_003773233.1| ATP synthase F1 subunit alpha [Leuconostoc gasicomitatum LMG 18811]
 gi|299888446|emb|CBL92414.1| ATP synthase F1, alpha subunit [Leuconostoc gasicomitatum LMG
           18811]
          Length = 504

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +   L V + G ++ I         L+     G+ +          G    
Sbjct: 10  ALIKQQLEKFDTTLTVEEVGTVTYIGDGVARANGLA-NAMAGELLEFANG---TFGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V I  +G  ++I  GD V   GR   +       GRV+N+LG+PIDG   + K D
Sbjct: 66  LDSSEVGIIILGGFDDIREGDTVKRTGRIMEVPVGEQLIGRVVNSLGQPIDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  +  K P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPVEFKAPGVMQRKSVFEPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D    VI   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKDQDMIVIYVAIGQKDSTVRTQVETLRQLGAMDYTIVVNAGPSEPAPMLYLAPYVGAA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLIVYDDLSKQATAYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG + L+      G  P +D   SVS
Sbjct: 305 SDELGGGSMTALPFIETQAGDVSAYIPTNVISITDGQVFLDADQFYAGVRPAIDAGTSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D      + +     + LK
Sbjct: 365 RVGGDAQIKAMKKVAGTLRLDLASFRELESFAQFG---SDLDAATQAKLARGRRTVEILK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|167856123|ref|ZP_02478864.1| ATP synthase subunit alpha [Haemophilus parasuis 29755]
 gi|219871747|ref|YP_002476122.1| F0F1 ATP synthase subunit alpha [Haemophilus parasuis SH0165]
 gi|254807699|sp|B8F772|ATPA_HAEPS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167852764|gb|EDS24037.1| ATP synthase subunit alpha [Haemophilus parasuis 29755]
 gi|219691951|gb|ACL33174.1| F0F1 ATP synthase subunit alpha/H(+)-transporting two-sector
           ATPase, (F1) alpha subunit [Haemophilus parasuis SH0165]
          Length = 513

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGVIRIHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMEVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPIEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             S    G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETSFFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ   +  S
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQFEPMS 440


>gi|57868898|gb|AAW57445.1| ATP synthase alpha subunit [Barringtonia asiatica]
          Length = 399

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVADGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDTGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +T  A + R ++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIICDDLTTLAVAYRLMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|311030127|ref|ZP_07708217.1| flagellum-specific ATP synthase [Bacillus sp. m3-13]
          Length = 437

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 158/434 (36%), Positives = 242/434 (55%), Gaps = 10/434 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV---VHQGKNSDNLGQVIRINL 67
           L E  + N   + G +  +  +   +        +GD     +H+ K      +V+    
Sbjct: 8   LQEIDTMNSYRRYGKVKRVIGLM--IESKGPESSIGDVCNIIIHKKKKRIVQAEVVGFRD 65

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V + P    ++I  G +V        I       G+V++ALGKP++ ++ L  G    
Sbjct: 66  DHVILMPFTDIQDIGPGCMVEATNNPLEIRIGEELRGKVLDALGKPLNQEEELPVGLGKY 125

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
                 P  M R  + +  + G++VID    +  GQR+G+FAGSG+GKSTLL M AR+  
Sbjct: 126 PTDQAPPNPMTRPSITEELEVGVKVIDGLLTVGKGQRVGIFAGSGVGKSTLLGMIARNTH 185

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +I+L+GERGREVR+F+  D   + L +S+V+VATSD+  ++R     TA  I+EYF
Sbjct: 186 ADINVIALIGERGREVRDFLERDLGPEGLSRSIVIVATSDQPALMRIKGAYTATAISEYF 245

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G NV+L++DS+TR A + RE+    GE P  +GY  SVFS LP+LLER G +  + G
Sbjct: 246 RDMGYNVMLMMDSVTRVAMAQREVGLAVGEPPTTKGYTPSVFSMLPKLLERTGTN--QHG 303

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VLVDGD+ N+PIAD+VR ILDGH VL+R LA +G+YP ++ L SVSR+ +   
Sbjct: 304 SITAFYTVLVDGDDMNEPIADTVRGILDGHFVLDRDLANKGQYPAINVLKSVSRVMNHIV 363

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-L 424
             + K+   S+   + ++ +  D+  IG Y+ G    +D A+   P I ++LKQ   D  
Sbjct: 364 DNEHKRAAESMREKLSKYYQAEDLINIGAYKRGSSREIDDAIQSYPAIINYLKQEVDDSW 423

Query: 425 SSEDVFQEITKKLQ 438
              D  +E+T  ++
Sbjct: 424 KFTDTKKELTNLMK 437


>gi|254519419|ref|ZP_05131475.1| flagellar protein export ATPase FliI [Clostridium sp. 7_2_43FAA]
 gi|226913168|gb|EEH98369.1| flagellar protein export ATPase FliI [Clostridium sp. 7_2_43FAA]
          Length = 436

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 159/415 (38%), Positives = 235/415 (56%), Gaps = 9/415 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQVIRINLDIVYICPVG 76
           N     G +  +  +   V  +  +V  G+      + N     +V+    D V + P+G
Sbjct: 17  NTYYLEGTVKQVIGLTIEVQGVKAFV--GELCTIYNQENQPIKCEVVGFREDAVLLMPLG 74

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               IS G  V    R   +  S    G++++ LG P+ GD+ +        + ++ P  
Sbjct: 75  ELIGISPGCRVVPERRPLEVRCSDDLLGKILDGLGNPLQGDEIIQGEG--YPLENQPPDP 132

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R+R+ +   TG+R ID F  +  GQRIG+FAGSG+GKST L M AR    D  +ISL+
Sbjct: 133 LTRRRITEILPTGVRAIDGFLTVGEGQRIGIFAGSGVGKSTTLGMIAREAEADINVISLI 192

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV EFI +D   + +KKS+VV ATSD+  ++R    LTA  IAEYF  KG  V+L
Sbjct: 193 GERGREVLEFIEKDLGPEGMKKSIVVCATSDKPALIRIKGALTATAIAEYFRDKGKKVIL 252

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + RE+    GE P  +GY  SVF++LP+L+ER G S+K  G+ITA  +VL
Sbjct: 253 MMDSVTRFAMAQREVGLAIGEPPAQKGYTPSVFAKLPKLMERPGTSDK--GSITAFYTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ N+PIAD+VR ILDGHIVL+R LA +  YP +D L S+SRL     +   K+  S
Sbjct: 311 VDGDDFNEPIADAVRGILDGHIVLSRDLAHKNHYPAIDILNSISRLMPSIATDIHKEASS 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
               L+  +++  D+  +G Y  G +  +D ++     +  +LKQ   + S  + 
Sbjct: 371 MGRDLLATYKDAEDLINLGAYVKGSNKKIDLSIQYNDRLNSYLKQGIEEKSDFNT 425


>gi|145298349|ref|YP_001141190.1| flagellum-specific ATP synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851121|gb|ABO89442.1| Polar flagellum-specific ATP synthase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 443

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 149/407 (36%), Positives = 229/407 (56%), Gaps = 5/407 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +     T+  +     +G       ++ +   +V+  + D +++ P    + +  
Sbjct: 25  GKLTRVVG--LTLEAIGCRAAIGALCRIDTQDGELEAEVVGFSGDRLFLMPSEQLKGVIP 82

Query: 84  GDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V        I       GRVI+ +G+P+DG   +           ++ P ++R+ + 
Sbjct: 83  GARVVPMTEEHGIPVGMNLLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIH 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV
Sbjct: 142 QPMDVGVRAINAVLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREV 201

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           +EFIED LG+    +SVVV A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR
Sbjct: 202 KEFIEDILGEEGRARSVVVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA   GE P  +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  
Sbjct: 262 YAQAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQ 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+     S +   L  +L     
Sbjct: 322 DPIADAARAILDGHIVLSRELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYS 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +++ RD+  IG Y  G D  +D+A+   P +  FL+Q   ++   D
Sbjct: 382 LYQQNRDLITIGAYSQGSDPRIDRAIVHKPYLDQFLQQGMREVIHYD 428


>gi|33598628|ref|NP_886271.1| F0F1 ATP synthase subunit alpha [Bordetella parapertussis 12822]
 gi|33603579|ref|NP_891139.1| F0F1 ATP synthase subunit alpha [Bordetella bronchiseptica RB50]
 gi|81579008|sp|Q7W3A8|ATPA_BORPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81714014|sp|Q7WEM7|ATPA_BORBR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33574757|emb|CAE39416.1| ATP synthase alpha chain [Bordetella parapertussis]
 gi|33577704|emb|CAE34969.1| ATP synthase alpha chain [Bordetella bronchiseptica RB50]
          Length = 513

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASTDVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +       GRV+N LG  ID
Sbjct: 58  -NVFGVALNLERDSVGAVVLGDYTGVSEGDQVKTTGRILEVPVGPELKGRVVNTLGDAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTTQTDI-IEKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +           ++VV A + +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|261346705|ref|ZP_05974349.1| ATP synthase F1, alpha subunit [Providencia rustigianii DSM 4541]
 gi|282565105|gb|EFB70640.1| ATP synthase F1, alpha subunit [Providencia rustigianii DSM 4541]
          Length = 513

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVNDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSPVEVIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +         + ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALENTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|57115599|gb|AAW33106.1| F1-ATPase alpha subunit [Rubus sp. JPM-2004]
          Length = 424

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKALLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSDSETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKI 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|50058631|gb|AAT69068.1| F1-ATPase alpha subunit [Schizanthus pinnatus]
          Length = 430

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P       RV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLXRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 359 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 408


>gi|6561633|gb|AAF16977.1|AF197645_1 ATPase alpha subunit [Cissampelos pareira]
          Length = 423

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 172/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 406


>gi|262273537|ref|ZP_06051351.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
 gi|262222515|gb|EEY73826.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
          Length = 413

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 144/406 (35%), Positives = 228/406 (56%), Gaps = 5/406 (1%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW-G 91
            T+  +   +  G   + +  + D +  + +  +     + P+     +  G  V    G
Sbjct: 4   LTMEAVGCRLSTGQRCLIETDHGDMVEAEAVGFDRHATVLMPIRHTTGLRPGCRVLPLFG 63

Query: 92  RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
             +I       GRV+N LG+P+D    L   +  + +       + RQ +      G+R 
Sbjct: 64  DSKIPVGPNLLGRVLNGLGEPLDSLGPLC-CEQRVPLQGDTINPLKRQPITHQLDVGVRA 122

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYL 210
           I+    +  GQR+G+FAGSG+GKS LL M  R+   +  ++ L+GERGREVREFI     
Sbjct: 123 INTMLSVGKGQRLGLFAGSGVGKSVLLGMMTRNTSAEITVVGLIGERGREVREFIEHSLG 182

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            + ++ +VV+ + +D+ P++R  A +    IAEYF  +G +VLL++DS+TR+A + REIA
Sbjct: 183 EEGMRNAVVIASPADDPPLMRLRASVLCHRIAEYFRDQGKDVLLLMDSLTRYAQAQREIA 242

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
            + GE P  +GYP SVFS LP+L+ER G    + G+ITA  +VL +GD+  DPIAD+ R+
Sbjct: 243 LSVGEPPATKGYPPSVFSLLPQLVERAGNGASDGGSITAFYTVLSEGDDQQDPIADAARA 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           ILDGHIVLNR+LAE+G YP +D   S+SR   +  SA+  K    +  L  R+ + +++ 
Sbjct: 303 ILDGHIVLNRALAEQGHYPAIDIEQSISRAMPQIVSAEHLKRAQRVKQLYARYRQVQELI 362

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435
            +GGY+ G D  LD AV   P I  FL+Q+  + ++  D  ++  +
Sbjct: 363 SLGGYQQGADHELDLAVQAYPSICQFLQQTMHENVTLTDSMEQFMQ 408


>gi|320324513|gb|EFW80590.1| type III secretion component, putative [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320328367|gb|EFW84370.1| type III secretion component, putative [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330882192|gb|EGH16341.1| type III secretion component [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 442

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 162/420 (38%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG     K G     + ++ P   +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTAKLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E         ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP    +G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGP--GPQGSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ + L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRHLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+    D   +   +L+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSE---HDSLAQTLARLR 438


>gi|330828802|ref|YP_004391754.1| flagellar protein export ATPase FliI [Aeromonas veronii B565]
 gi|328803938|gb|AEB49137.1| Flagellar protein export ATPase FliI [Aeromonas veronii B565]
          Length = 443

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 151/407 (37%), Positives = 228/407 (56%), Gaps = 5/407 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +     T+  +     +G        +     +V+  + D +Y+ P    + +  
Sbjct: 25  GKLTRVVG--LTLEAIGCRAAIGALCRIDTLDGTLEAEVVGFSGDRLYLMPSEQLKGVIP 82

Query: 84  GDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V        I       GRVI+ +G+P+DG   +           ++ P ++R+ + 
Sbjct: 83  GARVVPITEEHGIPVGMNLLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIH 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV
Sbjct: 142 QPMDVGVRAINAVLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREV 201

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           +EFIED LG+    +SVVV A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR
Sbjct: 202 KEFIEDILGEEGRARSVVVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA   GE P  +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  
Sbjct: 262 YAQAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQ 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+     S +   L  +L     
Sbjct: 322 DPIADAARAILDGHIVLSRELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYS 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +++ RD+  IG Y  G D  +D+A+ Q P +  FL+Q   ++   D
Sbjct: 382 LYQQNRDLITIGAYSQGSDPRIDRAIIQKPYLDQFLQQGMREVIHYD 428


>gi|149911796|ref|ZP_01900400.1| ATP synthase subunit A [Moritella sp. PE36]
 gi|149805142|gb|EDM65164.1| ATP synthase subunit A [Moritella sp. PE36]
          Length = 513

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEKFSVVSEARNEGTIVSVSDGIIRIHGLAD-CMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    ++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFGIALNLERDSVGAVVMGSYMGLAEGQKVRSTGRIFEVPVGRNLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  M R+ V++  + GI+ ID   P+  GQR  +     +GK
Sbjct: 117 GKGPID-NDGFSPVEVIAPGVMERKSVDQPIQIGIKAIDSMIPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           S +   ++  + D   K I   +G++   V   +         + ++ VVAT+ E+  L+
Sbjct: 176 SAIAIDAIINQKDSGIKCIYVAIGQKASTVASVVRKLEEHGAMENTIFVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 TTELFNSGTRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDDATRKQLDHGAKVTELMKQGQ 435


>gi|240950013|ref|ZP_04754321.1| F0F1 ATP synthase subunit alpha [Actinobacillus minor NM305]
 gi|240295491|gb|EER46234.1| F0F1 ATP synthase subunit alpha [Actinobacillus minor NM305]
          Length = 513

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 189/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMTVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|254361679|ref|ZP_04977816.1| H(+)-transporting two-sector ATPase, (F1) alpha subunit [Mannheimia
           haemolytica PHL213]
 gi|261491749|ref|ZP_05988329.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261495501|ref|ZP_05991948.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153093201|gb|EDN74212.1| H(+)-transporting two-sector ATPase, (F1) alpha subunit [Mannheimia
           haemolytica PHL213]
 gi|261308835|gb|EEY10091.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261312588|gb|EEY13711.1| F0F1 ATP synthase subunit alpha [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 513

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGVIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMQVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-QNDGFSPIEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESGLFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ   +  S
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQFEPMS 440


>gi|313890624|ref|ZP_07824252.1| ATP synthase F1, alpha subunit [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121141|gb|EFR44252.1| ATP synthase F1, alpha subunit [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 501

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 174/428 (40%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGIVTYIGDGIARARGLDNAMS-GELLEFSNG---AFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    + I  +G    I  GD+V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLETSDIGIIILGDFSTIREGDVVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ATTGFR-PVEAVAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTAVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQEDLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|157368255|ref|YP_001476244.1| F0F1 ATP synthase subunit alpha [Serratia proteamaculans 568]
 gi|166990363|sp|A8G7M6|ATPA_SERP5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157320019|gb|ABV39116.1| ATP synthase F1, alpha subunit [Serratia proteamaculans 568]
          Length = 513

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPVD-NDGFSPVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYREL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|289646623|ref|ZP_06477966.1| type III secretion component, putative [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 442

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 161/420 (38%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG       G     + ++ P   +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E         ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP    +G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPPRRGYPPSFFSALPRLLERAGP--GPQGSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+    D   +   +L+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSSIEAFLRQPPSE---HDSLAQTLARLR 438


>gi|196001889|ref|XP_002110812.1| ATP5A1 protein [Trichoplax adhaerens]
 gi|190586763|gb|EDV26816.1| ATP5A1 protein [Trichoplax adhaerens]
          Length = 453

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 164/376 (43%), Gaps = 18/376 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G  + I  GD+V   G    +       GRV++ALG PIDG   
Sbjct: 5   GMALNLEPDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPVGEELLGRVVDALGTPIDGKGP 64

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           +   +    +  K P  + R +V +  +TGI+ +D   P+  GQR  +      GK    
Sbjct: 65  INASE-RKRVGLKAPGIIPRIKVSEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAVA 123

Query: 175 -STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
             T+++    +D  D       I    G++   V + ++     D +K +++V AT+ ++
Sbjct: 124 IDTIINQKRFNDANDEKKKLYCIYVATGQKRSTVAQLVKRLSDSDAMKYTIIVSATASDA 183

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ ++P +   + E+F     + L+I D +++ A + R+++      P    YP  VF
Sbjct: 184 APLQYLSPYSGCAMGEFFRDNAKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 243

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER          G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 244 YLHSRLLERAAKMNDSNGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFYR 303

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   K++  ++   + ++ E   +     +   +D     
Sbjct: 304 GIRPAINVGLSVSRVGSAAQTKAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQS 360

Query: 406 AVHQVPIIYDFLKQSP 421
            +++   + + LKQ  
Sbjct: 361 LLNRGVRLTELLKQGQ 376


>gi|328958281|ref|YP_004375667.1| flagellum-specific ATP synthase [Carnobacterium sp. 17-4]
 gi|328674605|gb|AEB30651.1| flagellum-specific ATP synthase [Carnobacterium sp. 17-4]
          Length = 442

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 165/425 (38%), Positives = 241/425 (56%), Gaps = 10/425 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG--QVIRINLDIVYICP 74
           K+  ++ G +S +T +   V  L  +V  G+      K+S  +   +V+    ++V + P
Sbjct: 16  KDYYLKMGKVSQVTGLIIKVEGLDAFV--GEVCEIHIKSSGRIALSEVVGFVDEMVLLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E I  G LV   G+  ++  S    G  ++ LG+P+D   SL    +  ++    P
Sbjct: 74  LDELEGIGPGCLVKPTGKTLKVEISEKLLGNTLDGLGRPMD--TSLEVDGVFYDVNRSSP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               R++++    TGI+ ID    +  GQR+G+FAGSG+GKSTLL M AR    D ++I 
Sbjct: 132 NPFKRKKIKDVMPTGIKAIDGTLTVGEGQRVGIFAGSGVGKSTLLGMMARYIEADVIVIG 191

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV EFI +D   +  +KSVVV ATSD  P++R      A TIAEYF  +G  V
Sbjct: 192 LIGERGREVLEFIEKDLGEEGYRKSVVVCATSDMPPLVRLKGASVATTIAEYFRDQGKKV 251

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           +L++DS+TR A + REI   +GE P  +GY  SVF+ LP+LLER G SE   G+ITA  +
Sbjct: 252 VLMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFTTLPKLLERSGMSEN--GSITAFYT 309

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+PIADSVR ILDGHIVL+R +A E  YP +D   S+SRL     +      
Sbjct: 310 VLVEGDDMNEPIADSVRGILDGHIVLSRKIASENHYPAIDIQNSISRLMKDITTDKHSTT 369

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              L   +  + +++D+  +G YR G +  +D+AV     I DFLKQ   +  + D   +
Sbjct: 370 AGKLKENMSVYSDSKDLIDVGAYRKGSNPSVDRAVQLNTPIKDFLKQRVDERYAFDEVVD 429

Query: 433 ITKKL 437
             K L
Sbjct: 430 QLKAL 434


>gi|90579930|ref|ZP_01235738.1| flagellum-specific ATP synthase [Vibrio angustum S14]
 gi|90438815|gb|EAS63998.1| flagellum-specific ATP synthase [Vibrio angustum S14]
          Length = 440

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 145/432 (33%), Positives = 236/432 (54%), Gaps = 5/432 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L+Q   + +    V  G +  +     T+  +     +G     +  N +   +V+  
Sbjct: 7   ERLSQYKTEGTGCKPVASGRLVRVVG--LTLEAIGCRAPVGSLCKVETLNGELEAEVVGF 64

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + + +++ P      +  G  V        +       GRVI+ +G P+DG   +   + 
Sbjct: 65  SGETLFLMPSEQLLGVMPGAKVTPILHNSGLPVGPELLGRVIDGVGNPLDGLGPIF-TEH 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                +     + R+ +++    GI+ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 124 RASFNATPINPLARKPIKEPLDVGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRG 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFIE+ LG +   +SVVV A +D SP++R     T++TIAE
Sbjct: 184 TSAQIVVVGLIGERGREVKEFIEESLGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G   + 
Sbjct: 244 YFRDQGFDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNEN 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+   
Sbjct: 304 QGSITAFFTVLSEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPA 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P +  +L+Q   +
Sbjct: 364 IVSEEHMLMSKAVRQILSICRKNQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQEMKE 423

Query: 424 LSSEDVFQEITK 435
               ++   + +
Sbjct: 424 SVPYEMCVNMLR 435


>gi|34539195|gb|AAQ74481.1| F1-ATPase alpha subunit [Arisaema triphyllum]
          Length = 414

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 96/405 (23%), Positives = 172/405 (42%), Gaps = 19/405 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYXLNE-IXAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD--KVIISLVGERG 199
           TG++ +D   P+  GQR  +      GK      T+L+    +   +    +   +G++ 
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSSSETLYCVYVAIGQKR 176

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 177 STVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 236

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 237 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 296

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S 
Sbjct: 297 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSS 356

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D +    +++   + +  KQ  
Sbjct: 357 KLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQ 398


>gi|309779489|ref|ZP_07674250.1| flagellar protein export ATPase FliI [Ralstonia sp. 5_7_47FAA]
 gi|308921730|gb|EFP67366.1| flagellar protein export ATPase FliI [Ralstonia sp. 5_7_47FAA]
          Length = 486

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 160/447 (35%), Positives = 233/447 (52%), Gaps = 27/447 (6%)

Query: 8   LAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q A+       VV  G ++ +  +      L   V     V         L +V+   
Sbjct: 30  LQQTAQRARLARPVVTCGKLTRVAGLVMEAVGLKLPVGSACRVELP-HGRHVLAEVVGFA 88

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC------------------WCGRVINA 108
            +  ++ P      +  G  VF     R+  S+                     GRV++A
Sbjct: 89  EERAFLMPQTDLVGVVPGARVFPLEPQRLPVSSEDGADPTISHSKFLPVGPRLLGRVVDA 148

Query: 109 LGKPIDGDDSLGKG-DLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
            G+P+DG   LG   DL+   ++  P   + R+ +E     G+R I+    +  GQR+G+
Sbjct: 149 NGEPLDGKGPLGAHEDLAWGTLNPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQGQRLGL 208

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSD 225
           FAGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D
Sbjct: 209 FAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPAD 268

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
            SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S
Sbjct: 269 TSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPS 328

Query: 286 VFSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
            F++LP L+ER G          G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R 
Sbjct: 329 AFAKLPALVERAGNGMVDANGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRK 388

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           LAE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y  G D 
Sbjct: 389 LAEQGHYPAIDIEQSISRVMSAIVPREQLDTARRFKQLYARYQRNRDLIAVGAYARGSDP 448

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
           + D+A+ + P +  FL+Q   +  S +
Sbjct: 449 VTDQAIARYPDMEAFLQQGMFENESRE 475


>gi|34539393|gb|AAQ74580.1| F1-ATPase alpha subunit [Orontium aquaticum]
          Length = 410

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 169/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTXIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D +    +++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQ 401


>gi|328947997|ref|YP_004365334.1| ATPase, FliI/YscN family [Treponema succinifaciens DSM 2489]
 gi|328448321|gb|AEB14037.1| ATPase, FliI/YscN family [Treponema succinifaciens DSM 2489]
          Length = 449

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 163/441 (36%), Positives = 236/441 (53%), Gaps = 12/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDN 58
           M+   +      E      +   G +  +  +   +        +G+          S  
Sbjct: 1   MENFFDKYIHSIERIEP--IKYTGSVIGVKGLM--IESKGPRSVIGEICTIHIPSIQSSV 56

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           L +V+ +    V +   G  + I +G  V   G    +       GRVI+A GKP DG  
Sbjct: 57  LAEVVGLEDSSVRLMAYGETKGIEVGCEVVASGHVLEVPVGLSLLGRVIDATGKPYDGKG 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +     ++  P  M R+ ++K   TG+R ID    +  GQR+G+FAGSG+GKSTL
Sbjct: 117 EIFP-EAYYPALASPPNPMERKPIDKRIVTGVRAIDGILTVGKGQRLGIFAGSGVGKSTL 175

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           LSM AR+   D  +I L+GERGREV +FI  D   + LK+SV+VVATSD+  I R  A  
Sbjct: 176 LSMIARNTNADINVIGLIGERGREVMDFIKRDLGEEGLKRSVLVVATSDQPSISRLRAAY 235

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAEYF  +G +V+L+ DS+TRFAH+ REI   +GE P  RGYP SVF  LP+LLER
Sbjct: 236 VTTAIAEYFRDQGKDVMLMFDSVTRFAHAQREIGLATGEPPAQRGYPPSVFDMLPKLLER 295

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G ++K  G+ITA  +VLVDGD+ ++PIAD VR  LDGHIVL RSLA    YP +D L S
Sbjct: 296 TGTNDK--GSITAFYTVLVDGDDMDEPIADKVRGTLDGHIVLQRSLAARQHYPAIDMLTS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL+ +      KK V  +   I  + E  ++   G Y+ G    +D+A+     + +F
Sbjct: 354 ISRLSKRVSGTCTKKAVQRVRRWISVYSEQEEMINAGVYQKGSSPEIDEAIDHHQAVEEF 413

Query: 417 LKQSPS-DLSSEDVFQEITKK 436
           L Q  +  ++ ED  + +++ 
Sbjct: 414 LCQEENCHITIEDTLKSLSEL 434


>gi|301794522|emb|CBW36964.1| ATP synthase alpha chain [Streptococcus pneumoniae INV104]
 gi|332200949|gb|EGJ15020.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae GA47901]
          Length = 501

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 188/443 (42%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + V  G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENVMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T V +AE F  +G +VL++ D +++ + + RE++      P    +P  VF    RLLER
Sbjct: 241 TGVAMAEEFMYQGKHVLIVYDDLSKQSVAYRELSLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|62184683|ref|YP_219468.1| type III secretion system ATPase [Chlamydophila abortus S26/3]
 gi|62147750|emb|CAH63494.1| putative type III secretion or flagellar-type ATP synthase
           [Chlamydophila abortus S26/3]
          Length = 442

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 160/444 (36%), Positives = 252/444 (56%), Gaps = 15/444 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           +  + +TL     D     VV  G I+ +  +   +  +   V +G+  + +       +
Sbjct: 4   LTTDFDTLMSQLNDVHLTTVV--GRITEVVGML--IKAVVPNVRVGEVCLVKRYGMEPLV 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--D 116
            +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID    
Sbjct: 60  TEVVGFTQNFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEIK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   + +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS+
Sbjct: 120 GPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179

Query: 177 LLSMFARSDC-FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           LL M AR+    D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPRLL 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G ITA  +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+   YP +D L
Sbjct: 300 ERSGASDK--GTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAIDVL 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  + 
Sbjct: 358 ASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FLKQ   + ++   ++E +++L+
Sbjct: 418 RFLKQDIHEKTN---YEEASQQLR 438


>gi|313110384|ref|ZP_07796272.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           39016]
 gi|310882774|gb|EFQ41368.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           39016]
          Length = 429

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 233/419 (55%), Gaps = 12/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G ++ +T        +   V +G+    +  +     L +VI        + P+G    +
Sbjct: 15  GRVTQVTGTLLK--AVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGV 72

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   R++      G+V++ LG+P DG            +    P  M+R+ 
Sbjct: 73  SSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPA-AWYPVYRDAPQPMSRRL 131

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+    G+R ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGR
Sbjct: 132 IERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGR 191

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D     L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+
Sbjct: 192 EVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSL 251

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G SE  +G+ITA+ +VLV+GD+
Sbjct: 252 TRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSE--RGSITALYTVLVEGDD 309

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++P+AD  RSILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   
Sbjct: 310 MSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREW 369

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + ++EE   +  IG Y+ G D   D+A+ ++  I  +L+Q   + S    + +   +L+
Sbjct: 370 LAKYEEVELLLKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETSD---YAQACAQLR 425


>gi|42520504|ref|NP_966419.1| F0F1 ATP synthase subunit alpha [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|81652515|sp|Q73HB2|ATPA_WOLPM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|42410243|gb|AAS14353.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 513

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 189/432 (43%), Gaps = 23/432 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E +   +  +  G + S+T     V  L +    G+ V      S   G V+ 
Sbjct: 12  SIIREKVETFDNPIKRENIGEVISVTDGIALVYGLEK-AKFGEKVFFA---SGVEGIVLD 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ +   I  +G   ++  GD+V   G   ++       GRV+NALG P+D    + +  
Sbjct: 68  LDHNTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGHPMDDGGEI-RAK 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M+I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+      
Sbjct: 127 NRMDIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIALDTII 186

Query: 184 S----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +          +     +   +G++   V + +         + + VVVA++ +   ++ 
Sbjct: 187 NQKKVNDEVNENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDCAPMQF 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    TI E+F   G + L+I D +++ A + R+++      P    YP  +F    R
Sbjct: 247 LAPYAGCTIGEFFRDNGMHCLIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIFYVHSR 306

Query: 293 LLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +KG    TA+  V     + +  +  +V SI DG I L   L  +G  P 
Sbjct: 307 LLERAAKMSDKKGQGSLTALPIVETQAGDVSAYVPTNVISITDGQIFLESELFYKGFRPA 366

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           V+   SVSR+   A     KK+  S+   + ++ E  D      +   +D  +  ++++ 
Sbjct: 367 VNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFA---KFGSDLDASVQLSLNKG 423

Query: 411 PIIYDFLKQSPS 422
             + + LKQ   
Sbjct: 424 KYLVELLKQKQH 435


>gi|89075516|ref|ZP_01161927.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34]
 gi|89048788|gb|EAR54359.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34]
          Length = 440

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 145/432 (33%), Positives = 236/432 (54%), Gaps = 5/432 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L+Q   + +    V  G +  +     T+  +     +G     +  N +   +V+  
Sbjct: 7   ERLSQYKTEGTGCKPVASGRLVRVVG--LTLEAIGCRAPVGSLCKVETLNGELEAEVVGF 64

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + + +++ P      +  G  V        +       GRVI+ +G P+DG   +   + 
Sbjct: 65  SGETLFLMPSEQLLGVMPGAKVTPILHNSGLPVGPELLGRVIDGVGNPLDGLGPIF-TEH 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                +     + R+ +++    GI+ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 124 RASFNATPINPLARKPIKEPLDVGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRG 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFIE+ LG +   +SVVV A +D SP++R     T++TIAE
Sbjct: 184 TNAQIVVVGLIGERGREVKEFIEESLGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G   + 
Sbjct: 244 YFRDQGFDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNEN 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+   
Sbjct: 304 QGSITAFFTVLSEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPA 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P +  +L+Q   +
Sbjct: 364 IVSEEHMLMSKAVRQILSICRKNQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQEMKE 423

Query: 424 LSSEDVFQEITK 435
               ++   + +
Sbjct: 424 SVPYEMCVNMLR 435


>gi|124487982|gb|ABN12074.1| putative mitochondrial ATP synthase alpha subunit precursor
           [Maconellicoccus hirsutus]
          Length = 459

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 165/376 (43%), Gaps = 18/376 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G  + I  GD+V   G    +       GRV++ALG  IDG   
Sbjct: 10  GMALNLEPDNVGVVVFGGDKLIKEGDVVKRTGAIVDVPVGEDLLGRVVDALGNVIDGKGP 69

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           L        +  K P  + R  V +  +TGI+ +D   P+  GQR  +      GK    
Sbjct: 70  L-TSKKRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTALA 128

Query: 175 -STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDES 227
             T+++    ++  D       I   +G++   V + ++        K +++V AT+ ++
Sbjct: 129 IDTIINQQRFNNAEDEKKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMKYTIIVSATASDA 188

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 189 APLQYLAPYSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 248

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER     ++   G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 249 YLHSRLLERAAKMNEKEGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 308

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   K++  S+   + ++ E   +     +   +D    +
Sbjct: 309 GVRPAINVGLSVSRVGSAAQTRAMKQVAGSMKLELAQYRE---VAAFAQFGSDLDAATQQ 365

Query: 406 AVHQVPIIYDFLKQSP 421
            +++   + + LKQ  
Sbjct: 366 LLNRGVRLTELLKQGQ 381


>gi|27355166|dbj|BAC52150.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110]
          Length = 379

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 198/376 (52%), Positives = 269/376 (71%)

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +RI+ + +   P        LG + +       +P   W GRVINALG P+DG   L  G
Sbjct: 2   VRIDSEGIIAKPFDRQFAGGLGSVAYRMPPLSFAPDPSWKGRVINALGAPLDGQGPLTPG 61

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             ++   ++ P AM R RV K  +TG+RVID+F P+C GQR+G+FAGSG+GKSTLL+M A
Sbjct: 62  SRAVSAEAEAPSAMKRARVHKPLRTGVRVIDLFAPICAGQRVGIFAGSGVGKSTLLAMLA 121

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           RS  FD V+++LVGERGREVREFIED LG N  ++V +V+T DESP++R++AP TA+ +A
Sbjct: 122 RSQGFDTVVLALVGERGREVREFIEDVLGANRNRAVTIVSTGDESPMMRRLAPKTAMAVA 181

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G++VLL++DSITRFAH+ RE+A  +GE  VARGY  +VF++LPRLLER GP E+
Sbjct: 182 EYFRDRGESVLLVVDSITRFAHAAREVALAAGEPAVARGYAPTVFTDLPRLLERAGPGEE 241

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G IT + SVLVDGD+HN+PIAD++RS LDGHIVL+R +A++ RYP VD LASVSRLA 
Sbjct: 242 GSGTITGIFSVLVDGDDHNEPIADTIRSTLDGHIVLSRHIADQARYPAVDVLASVSRLAH 301

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             W  +E++LVS L  +I ++E+TRD+RL+GGY+ G D  LD+A+  VP IY  ++Q  S
Sbjct: 302 NVWDPEERELVSKLRTMIAKYEDTRDLRLMGGYQSGRDSGLDQAIDLVPRIYSAMRQDAS 361

Query: 423 DLSSEDVFQEITKKLQ 438
              S D F+E+   L+
Sbjct: 362 AQPSADPFRELRDMLK 377


>gi|29655227|ref|NP_820919.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii RSA 493]
 gi|153206131|ref|ZP_01945394.1| ATP synthase F1, alpha subunit [Coxiella burnetii 'MSU Goat Q177']
 gi|154705840|ref|YP_001423604.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii Dugway
           5J108-111]
 gi|161831117|ref|YP_001597759.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii RSA 331]
 gi|165918749|ref|ZP_02218835.1| ATP synthase F1, alpha subunit [Coxiella burnetii RSA 334]
 gi|212211721|ref|YP_002302657.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii CbuG_Q212]
 gi|212217736|ref|YP_002304523.1| F0F1 ATP synthase subunit alpha [Coxiella burnetii CbuK_Q154]
 gi|81722487|sp|Q83AF7|ATPA_COXBU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081295|sp|A9KBF9|ATPA_COXBN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081296|sp|A9NBC8|ATPA_COXBR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739864|sp|B6J961|ATPA_COXB1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739865|sp|B6J2D8|ATPA_COXB2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|29542499|gb|AAO91433.1| ATP synthase alpha chain [Coxiella burnetii RSA 493]
 gi|120577261|gb|EAX33885.1| ATP synthase F1, alpha subunit [Coxiella burnetii 'MSU Goat Q177']
 gi|154355126|gb|ABS76588.1| ATP synthase alpha chain [Coxiella burnetii Dugway 5J108-111]
 gi|161762984|gb|ABX78626.1| ATP synthase F1, alpha subunit [Coxiella burnetii RSA 331]
 gi|165917577|gb|EDR36181.1| ATP synthase F1, alpha subunit [Coxiella burnetii RSA 334]
 gi|212010131|gb|ACJ17512.1| ATP synthase alpha chain [Coxiella burnetii CbuG_Q212]
 gi|212011998|gb|ACJ19378.1| ATP synthase alpha chain [Coxiella burnetii CbuK_Q154]
          Length = 515

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/447 (23%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q     ++ + E   +           G I +I      V  L + V  G+ V       
Sbjct: 4   QLRAAEISDIIESRIEKFGIKAEERTEGTILNIKDGIVRVYGL-RDVMFGEMVEFP---E 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           +  G    +  D V    +G  E +  G      GR   +       GRV++ LGKPIDG
Sbjct: 60  NTYGLAFNLERDSVGAVVMGPYEHLEEGMTARCTGRILEVPVGEALLGRVVDGLGKPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   + S  I    P  + R+ V+    TG++ ID   P+  GQR  +      GK+
Sbjct: 120 KGPIDTSETS-PIEKVAPGVITRKSVDTSLPTGLKSIDAMVPIGRGQRELIIGDRQTGKT 178

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +   ++  +     K I   +G++   V   +         + ++VV A++ E+  L+ 
Sbjct: 179 AIAIDTIINQKHTGVKCIYVAIGQKQSSVAAVVRKLEEHGAMEHTIVVNASASEAAALQY 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G + L++ D +T+ A + R+I+      P    YP  +F    R
Sbjct: 239 LAPYAGCTMGEYFRDRGQDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSR 298

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 299 LLERAAHVNEAYVKEFTKGKVTGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIYLD 358

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A +   KKL+  L   + ++ E         +   +
Sbjct: 359 VNLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLIGGLRIALAQYRELE---AFSQFASDL 415

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + LKQ      S
Sbjct: 416 DEATRKQLEHGQRVMEILKQPQYQPLS 442


>gi|262284529|gb|ACY41066.1| VscN [Vibrio alginolyticus]
          Length = 440

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 156/423 (36%), Positives = 229/423 (54%), Gaps = 9/423 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 11  QQSAIKHTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G  ++ LG+P DG  S        
Sbjct: 69  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGTTLDGLGRPFDGTQSQEPS-AWY 127

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 128 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAE 187

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   + + KSV+VVATSD   + R  A   A +IAEYF
Sbjct: 188 VDVTVLALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYF 247

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 248 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 306 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
            +D +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q   + S
Sbjct: 366 ESDHQASAAHIREMLAKYEEVELLIKIGEYQHGADSRADMAIAQSDDIRAFLRQGTHEPS 425

Query: 426 SED 428
             D
Sbjct: 426 DLD 428


>gi|15596894|ref|NP_250388.1| type III secretion system ATPase [Pseudomonas aeruginosa PAO1]
 gi|9947670|gb|AAG05086.1|AE004596_12 ATP synthase in type III secretion system [Pseudomonas aeruginosa
           PAO1]
          Length = 440

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 233/419 (55%), Gaps = 12/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G ++ +T        +   V +G+    +  +     L +VI        + P+G    +
Sbjct: 26  GRVTQVTGTLLK--AVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGV 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   R++      G+V++ LG+P DG            +    P  M+R+ 
Sbjct: 84  SSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPA-AWYPVYRDAPQPMSRRL 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+    G+R ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGR
Sbjct: 143 IERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGR 202

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D     L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+
Sbjct: 203 EVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSL 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G SE  +G+ITA+ +VLV+GD+
Sbjct: 263 TRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSE--RGSITALYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++P+AD  RSILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   
Sbjct: 321 MSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREW 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + ++EE   +  IG Y+ G D   D+A+ ++  I  +L+Q   + S    + +   +L+
Sbjct: 381 LAKYEEVELLLKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETSD---YAQACAQLR 436


>gi|116049647|ref|YP_791548.1| type III secretion system ATPase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254234796|ref|ZP_04928119.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           C3719]
 gi|2459981|gb|AAB86534.1| PscN [Pseudomonas aeruginosa]
 gi|115584868|gb|ABJ10883.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166727|gb|EAZ52238.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa
           C3719]
          Length = 440

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 233/419 (55%), Gaps = 12/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G ++ +T        +   V +G+    +  +     L +VI        + P+G    +
Sbjct: 26  GRVTQVTGTLLK--AVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGV 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   R++      G+V++ LG+P DG            +    P  M+R+ 
Sbjct: 84  SSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPA-AWYPVYRDAPQPMSRRL 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+    G+R ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGR
Sbjct: 143 IERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGR 202

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D     L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+
Sbjct: 203 EVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSL 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G SE  +G+ITA+ +VLV+GD+
Sbjct: 263 TRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSE--RGSITALYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++P+AD  RSILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   
Sbjct: 321 MSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREW 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + ++EE   +  IG Y+ G D   D+A+ ++  I  +L+Q   + S    + +   +L+
Sbjct: 381 LAKYEEVELLLKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETSD---YAQACAQLR 436


>gi|580859|emb|CAA39523.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 440

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 161/442 (36%), Positives = 240/442 (54%), Gaps = 15/442 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--- 57
           MQ N +T +      + +   + G +  +  +   +        +GD  +   K      
Sbjct: 1   MQLNEDTESDRLYRMTDSY-KRYGKVKRVIGLM--IESKGPASSIGDLCLIYAKGQSGKV 57

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
              +V+    + + + P      I+ G +V   G   R+       G+VI+A G+P+D  
Sbjct: 58  IKAEVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDE- 116

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            S  +    +      P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKST
Sbjct: 117 -SFCRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKST 175

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAP 235
           L+ M A+    D  +I+LVGERGREVREFI +D   + LK+S+VVVATSD+  ++R  A 
Sbjct: 176 LMGMIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAA 235

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            TA  IAEYF  KG NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLE
Sbjct: 236 YTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLE 295

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G +E   G ITA  +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L 
Sbjct: 296 RTGANE--HGTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLK 353

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+     +       +    L+  ++ + D+  IG Y+ G    +D+A+   P +  
Sbjct: 354 SISRVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQ 413

Query: 416 FLKQSPSDLSSEDVFQEITKKL 437
           FLKQ   + +   + +E    L
Sbjct: 414 FLKQGTDEPA---LLEESIAAL 432


>gi|68249083|ref|YP_248195.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 86-028NP]
 gi|81336511|sp|Q4QN62|ATPA_HAEI8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|68057282|gb|AAX87535.1| ATP synthase alpha chain [Haemophilus influenzae 86-028NP]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 104/448 (23%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +   +   GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGSGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D S  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEIENDDFS-PVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|304413047|ref|ZP_07394520.1| membrane-bound ATP synthase, F1 complex, alpha subunit [Candidatus
           Regiella insecticola LSR1]
 gi|304283890|gb|EFL92283.1| membrane-bound ATP synthase, F1 complex, alpha subunit [Candidatus
           Regiella insecticola LSR1]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 111/443 (25%), Positives = 192/443 (43%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIISVSDGIIRIHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            ++    + +  D V    +G   +++ G  V   GR   +   +   GRVIN LG+PID
Sbjct: 58  -NSYAMALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGSGLLGRVINTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  ++RQ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-ENDGFSAVEAIAPGVIDRQSVNESVQTGYKSVDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L      +      K +   +G++   V   +      D L  ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRHSDIKCVYVAIGQKASTVANVVRKLEEHDALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVTAFTKGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGGAAQTQIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K ++    + + LKQ  
Sbjct: 413 LDDTTRKQLNHGQKVTELLKQKQ 435


>gi|34539301|gb|AAQ74534.1| F1-ATPase alpha subunit [Freycinetia multiflora]
          Length = 416

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDVLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI--TAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      + G    TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSXTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 SLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|6561619|gb|AAF16963.1|AF197631_1 ATPase alpha subunit [Anemopsis californica]
          Length = 398

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/394 (23%), Positives = 165/394 (41%), Gaps = 22/394 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLFCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 354

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               +   +D I    + +   + + LKQ   + 
Sbjct: 355 AFAQFGSDLDAITQALLQRGARLTEVLKQPQYEP 388


>gi|320539767|ref|ZP_08039428.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Serratia
           symbiotica str. Tucson]
 gi|320030170|gb|EFW12188.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Serratia
           symbiotica str. Tucson]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVQGLAK-VMQGEMIALSG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-ENDGFSPVEAIAPGVIERQSVDQPVQTGYKSVDAMIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L+     +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALVVDTIINQRDSGIKCVYVAIGQKASTIANVVRKLEDHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|34539255|gb|AAQ74511.1| F1-ATPase alpha subunit [Chorigyne cylindrica]
          Length = 416

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 169/407 (41%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 SLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|27461593|gb|AAM95213.1| ATPase F1 alpha subunit [Streptochaeta angustifolia]
          Length = 399

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  LS+ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLSE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|55824786|gb|AAV66475.1| F1-ATPase alpha subunit [Gelsemium sempervirens]
          Length = 413

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|34558482|ref|NP_908297.1| flagellum-specific ATP synthase [Wolinella succinogenes DSM 1740]
 gi|34484201|emb|CAE11197.1| FLAGELLUM-SPECIFIC ATP SYNTHASE [Wolinella succinogenes]
          Length = 434

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 163/410 (39%), Positives = 242/410 (59%), Gaps = 7/410 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNS-DNLGQVIRINLDIVYICP 74
           K+L    G +  ++S    V  L   V  GD V + QG+N  +++G V  +  +   + P
Sbjct: 13  KSLSPTFGTVVKVSSGAIVVVGLRPSV--GDIVRIIQGENHHESMGMVTVVESESFTVSP 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               E   +GD V+   R  +I   A   GRV++ LG+PIDG   +   + +  I+    
Sbjct: 71  FSFIEGSKVGDRVYLNNRGLQIPVGAGLLGRVVDPLGRPIDGAGEILGTEYA-PIIKPPI 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
            AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  +       +I+
Sbjct: 130 AAMKRGMIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKGASAPIKVIA 189

Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           L+GERGREV EFIE  LG NL+ +V+VVATSD+SP++RK    +A+++AEYF ++G++VL
Sbjct: 190 LIGERGREVPEFIEKNLGGNLENTVLVVATSDDSPLMRKYGAFSAMSVAEYFKARGEDVL 249

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
            ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E   G+ITA  +V
Sbjct: 250 FMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAGKEEGH-GSITAFFTV 308

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+  DPIAD  RSILDGHIVL+R L + G YPP++ L S SRL +   + D     
Sbjct: 309 LVEGDDMGDPIADQSRSILDGHIVLSRELTDFGIYPPINILNSASRLMNDVSTKDHVLAA 368

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                L    +E   +  IG Y+ G D  LD+A+ +   +  +LKQ+  +
Sbjct: 369 RKFRRLYSLLKENEVLIRIGAYQKGNDRELDEAIEKKERMEGYLKQNFDE 418


>gi|306813317|ref|ZP_07447510.1| FliI/YscN family ATPase [Escherichia coli NC101]
 gi|305854080|gb|EFM54519.1| FliI/YscN family ATPase [Escherichia coli NC101]
          Length = 446

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 151/425 (35%), Positives = 228/425 (53%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W G V+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGCVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GY  S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYLPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSPEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             ++      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARAMKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMHEPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|313847592|emb|CBY16580.1| putative type III secretion or flagellar-type ATP synthase
           [Chlamydophila psittaci RD1]
 gi|328914225|gb|AEB55058.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila psittaci
           6BC]
          Length = 442

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 160/444 (36%), Positives = 252/444 (56%), Gaps = 15/444 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           +  + +TL     D     VV  G I+ +  +   +  +   V +G+  + +       +
Sbjct: 4   LTTDFDTLMSQLNDVHLTTVV--GRITEVVGML--IKAVVPNVRVGEVCLVKRYGMEPLV 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--D 116
            +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID    
Sbjct: 60  TEVVGFTQNFAFLSPLGELTGVSPSSEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEIK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   + +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS+
Sbjct: 120 GPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179

Query: 177 LLSMFARSDC-FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           LL M AR+    D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPRLL 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G ITA  +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+   YP +D L
Sbjct: 300 ERSGASDK--GTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAIDVL 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SRL       ++++++     ++ +++    +  IG YR G D  +D A+  +  + 
Sbjct: 358 ASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FLKQ   + ++   ++E +++L+
Sbjct: 418 RFLKQDIHEKTN---YEEASQQLR 438


>gi|307133305|ref|YP_003885321.1| F1 sector of membrane-bound ATP synthase, subunit alpha [Dickeya
           dadantii 3937]
 gi|306530834|gb|ADN00765.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Dickeya
           dadantii 3937]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    + +  P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPL-EHDGFSPVEAIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYREL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|166713526|ref|ZP_02244733.1| F0F1 ATP synthase subunit alpha [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 515

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 183/441 (41%), Gaps = 30/441 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     ++              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEDYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
              K + +   + + +KQ   
Sbjct: 418 ATRKQLERGQRVTELMKQKQF 438


>gi|332163552|ref|YP_004300129.1| F0F1 ATP synthase subunit alpha [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667782|gb|ADZ44426.1| F0F1 ATP synthase subunit alpha [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861782|emb|CBX71955.1| ATP synthase subunit alpha [Yersinia enterocolitica W22703]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+P+D
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+ + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGSV-ENDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|27376927|ref|NP_768456.1| RhcN protein [Bradyrhizobium japonicum USDA 110]
 gi|12620523|gb|AAG60799.1|AF322012_104 RhcN [Bradyrhizobium japonicum]
 gi|27350069|dbj|BAC47081.1| RhcN protein [Bradyrhizobium japonicum USDA 110]
          Length = 451

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 158/430 (36%), Positives = 235/430 (54%), Gaps = 10/430 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNL 59
           +  L +L   A+      V   G I+           +     +G+  + Q   S     
Sbjct: 18  KAALSSLRSSAKHIDTRAVR--GRITRAVGTLL--HAVLPEARVGELCLLQDPRSGWSLE 73

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
            +VI +  D V + P+G    +S    V   GR + ++      GRVI++ G+P+DG   
Sbjct: 74  AEVIGLLPDGVLLTPIGDMVGLSNRAEVVTTGRMQEVAAGPDLLGRVIDSFGRPLDGKGP 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +  G+    +  + P  M R+ +E+ F  G+RV+D       GQRIG++  +G GKSTL+
Sbjct: 134 IKAGEAR-PLRGRAPNPMKRRAIEQPFPLGVRVLDGLLTCGEGQRIGIYGDAGCGKSTLM 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           S   R    D  I++L+GERGREVREFIE +LG+ L +SVVVV TSD S + R      A
Sbjct: 193 SQIVRGAAADVTIVALIGERGREVREFIERHLGEALHRSVVVVETSDRSAMERAQCAHMA 252

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G  V+L++DS+TRF+ ++REI   +GE P  RG+P SVF+ LP LLER G
Sbjct: 253 TALAEYFRDQGLRVVLMMDSLTRFSRAMREIGLAAGEPPTRRGFPPSVFALLPGLLERAG 312

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VLV+GD   DPIA+  R ILDGHI+L+R+LA    +P +D L+S S
Sbjct: 313 MGE--HGSITAFYTVLVEGDGTGDPIAEESRGILDGHIILSRALASREHFPAIDVLSSRS 370

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ D   S   +K  S    L+ R+ E   +  +G Y+ G D + D+A+  +  +  FL+
Sbjct: 371 RVMDAIVSVPHRKAASFFRDLLSRYAEAEFLIKVGEYKQGSDPLTDRAIASIEQLRAFLR 430

Query: 419 QSPSDLSSED 428
           Q   +  S +
Sbjct: 431 QGQGEACSFE 440


>gi|6652831|gb|AAF22496.1|AF098522_6 F1F0-ATPase subunit alpha [Lactobacillus acidophilus]
          Length = 503

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 176/426 (41%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L   +  G+ +     +    G    
Sbjct: 10  SLIKQQLEHYDDKLDINEVGVVTYVGDGIARAHGLDDVLS-GELLKFDNGS---FGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGQFDNIREGDRVQRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KSD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I +K P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 125 KTRPIEAKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP     
Sbjct: 185 NQKGQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPMLYIAPYAGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D   SVS
Sbjct: 305 SDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGNSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G      D      +++     + LK
Sbjct: 365 RVGGNAQIKAMKKVAGTLRTDLTAYRELESFAQFG---SDPDQATQAKLNRGQRTVEVLK 421

Query: 419 QSPSDL 424
           Q   D 
Sbjct: 422 QPLHDP 427


>gi|77165819|ref|YP_344344.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrosococcus oceani ATCC 19707]
 gi|254434391|ref|ZP_05047899.1| flagellar protein export ATPase FliI [Nitrosococcus oceani AFC27]
 gi|76884133|gb|ABA58814.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrosococcus oceani ATCC 19707]
 gi|207090724|gb|EDZ67995.1| flagellar protein export ATPase FliI [Nitrosococcus oceani AFC27]
          Length = 480

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 151/443 (34%), Positives = 241/443 (54%), Gaps = 11/443 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG 60
           Q  L    +     +  LV   G ++ +     T+  +   + +G    + + +      
Sbjct: 16  QHALAGCRERLARDTAPLVTVEGRLTRMVG--LTLEAVGCQLPVGGRCHILRQERLPVEA 73

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLV---FHWGRFRISPSACWCGRVINALGKPIDGDD 117
           +V+    + +++ P+G    +     V    H GR   +      GRV++  G+P+D   
Sbjct: 74  EVVGFAGERLFLMPIGDPRGLVPNAPVIPLRHGGRM--AVGEALLGRVLDGGGRPLDDLG 131

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L +    + +  +    + RQ + +    G+  I+    +  GQR+G+FAGSG+GKS L
Sbjct: 132 PL-RATHRVSLEGQPINPLARQPIREPMDVGVAAINALLTIGRGQRMGLFAGSGVGKSVL 190

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ L+GERGREV+EFIE+ LG + L +SVVV   +D SP++R    +
Sbjct: 191 LGMMTRYAKADVIVVGLIGERGREVQEFIENILGKEGLARSVVVATPADHSPLMRIHGAM 250

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G  VLL++DS+TRF H+ RE+A   GE P  RGYP SVF+++P+LLER
Sbjct: 251 LATSIAEYFRDQGKQVLLLMDSLTRFGHAQRELALAIGEPPATRGYPPSVFAKIPQLLER 310

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G      G+ITA  +VL +GD+ NDP+ADS R+ILDGHIVL+R LAE G YP +D  AS
Sbjct: 311 AGNGRSGSGSITAFYTVLTEGDDPNDPVADSARAILDGHIVLSRRLAEAGHYPAIDIEAS 370

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +    + ++       +   + + +D+  +G Y  G D  LD+AV + P    F
Sbjct: 371 ISRVMSQITVPEHQQAAQQFKQIYSLYSQNQDLISVGAYSRGSDSRLDEAVDRQPQFRSF 430

Query: 417 LKQSPSD-LSSEDVFQEITKKLQ 438
           L+Q  S   S ++  + + + L+
Sbjct: 431 LQQDMSQSFSVKESLERLQQALK 453


>gi|114566387|ref|YP_753541.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337322|gb|ABI68170.1| type III secretion system ATPase, FliI/YscN [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 442

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 157/405 (38%), Positives = 232/405 (57%), Gaps = 10/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL---GQVIRINLDIVYICPVGIGEE 80
           G IS   ++  T+      V +G+    Q   SD      +V+      + + P+G  E 
Sbjct: 26  GRISQ--AIGLTIEATGPRVRMGELCFLQTNYSDRQLVPAEVVGFKDKKILLMPLGNLEG 83

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G  +   G   R+       GRV+N LG+PID    + K + +  + ++ P  + R+
Sbjct: 84  IGPGSELLASGTTLRVQVGMELVGRVLNGLGEPIDDRGRI-KSETTYPVTNQPPSPLKRK 142

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +  + G++ ID    +  GQR+G+ AGSG+GKSTL+ M AR+   D  +I+L+GERG
Sbjct: 143 RITEVLQVGVKAIDGLVSIGKGQRMGILAGSGVGKSTLIGMIARNTEADINVIALIGERG 202

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+  D   + L KSVVVVATSD+  ++R      A +IAEYF  +G +VL ++DS
Sbjct: 203 REVREFLERDLGEEGLGKSVVVVATSDQPALVRLKGAFVATSIAEYFRDQGKDVLFLMDS 262

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+    GE P  RGY  SVF+ LP+LLER G SEK  G IT + SVLV+GD
Sbjct: 263 VTRFALAQREVGLAIGEPPATRGYTPSVFAMLPKLLERAGTSEK--GTITGLYSVLVEGD 320

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PI D+VR ILDGHI L+RSLA    YP +D   S+SR+     S    K  +    
Sbjct: 321 DLNEPITDAVRGILDGHIALSRSLAAMNLYPAIDVGQSISRVMIDIASPKHIKNANRFRS 380

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           ++  +EE RD+  IG Y+ G +  +D+++  +    +F++Q   D
Sbjct: 381 ILATYEEARDLIDIGAYKKGSNPRIDESIALIDKCQNFIRQDIYD 425


>gi|67522132|ref|XP_659127.1| ATPA_NEUCR ATP synthase alpha chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
 gi|40744623|gb|EAA63779.1| ATPA_NEUCR ATP synthase alpha chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
          Length = 573

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 99/446 (22%), Positives = 186/446 (41%), Gaps = 33/446 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYIS----SITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           +++ +  + + +       V+  G ++    SI+     V  ++  V   + V      S
Sbjct: 58  LEQRIRGVQEESGLAETGRVLSVGAVTDSILSISDGIARVHGMT-NVQAEELVEFA---S 113

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR--------ISPSACWCGRVINA 108
              G  + +    V +   G    +  G+ V   G           +       GRV++A
Sbjct: 114 GVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIHYLQTIQVDVPVGPELLGRVVDA 173

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG PIDG   +     S     K P  + R+ V +  +TG++ +D   P+  GQR  +  
Sbjct: 174 LGNPIDGKGPINASTKSRA-QLKAPGILPRRSVNQPVQTGLKCVDSMVPIGRGQRELIIG 232

Query: 169 GSGIGK-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-S 217
               GK       +L+    ++  D       I   VG++   V + ++    ++  K S
Sbjct: 233 DRQTGKTAVALDAMLNQKRWNNTSDESKKLYCIYVAVGQKRSTVAQLVKTLEENDAMKYS 292

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +VV AT+ E+  L+ +AP T   + E+F   G + +++ D +++ A + R+++      P
Sbjct: 293 IVVAATASEAAPLQYLAPFTGCAMGEWFRDNGRHAVIVYDDLSKQAVAYRQMSLLLRRPP 352

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER      +   G++TA+  +   G + +  I  +V SI DG 
Sbjct: 353 GREAYPGDVFYLHSRLLERAAKMNDKHGGGSLTALPVIETQGGDVSAYIPTNVISITDGQ 412

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +
Sbjct: 413 IFLEAELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQF 469

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D    + +++   + + LKQ  
Sbjct: 470 GSDLDASTKQTLNRGQRLTELLKQKQ 495


>gi|3273578|gb|AAC24771.1| F1-ATPase alpha subunit [Symplocarpus foetidus]
          Length = 421

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 169/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D +    +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQ 402


>gi|323144393|ref|ZP_08079001.1| ATP synthase F1, alpha subunit [Succinatimonas hippei YIT 12066]
 gi|322415846|gb|EFY06572.1| ATP synthase F1, alpha subunit [Succinatimonas hippei YIT 12066]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 181/443 (40%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A L +   +   V       G I S++     +  L+  V  G+ +      
Sbjct: 1   MQLNSTEIADLIKQRIEQFKVVTQSCDEGTIISVSDGIVRIHGLA-NVMQGEMLQF---G 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G  + +  D V    +G    +S G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DDLYGLALNLERDSVGAIVLGPYTHLSEGMKVRGTGRILSVPVGKGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + RQ V +  +TG + +D   P+  GQR  +     +GK
Sbjct: 117 GKGPIVSDDF-YPVEKIAPGVIARQSVSQPIQTGYKAVDSMIPIGRGQRELIIGDRQVGK 175

Query: 175 STLLSMFARSDC--FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +      + I   +G++   +   +           ++VV A++ ++  L+
Sbjct: 176 TALAVDTIINQKNYGVRCIYVAIGQKASTIASVVRKLEEHGALDNTIVVSASASDTAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YIAPYAGCAMGEYFLDQGEDALVVYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  I  +V SI DG I L
Sbjct: 296 RLLERACRVNAEYLEKLSGGKITGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 TSSLFNSGVRPAVDPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDEATRKQLDHGKKVTELMKQRQ 435


>gi|57115593|gb|AAW33103.1| F1-ATPase alpha subunit [Plantago rugelii]
          Length = 413

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 99/402 (24%), Positives = 171/402 (42%), Gaps = 23/402 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGNDTAIQEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ LG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKTLLGRVVDGLGLPIDGKGALGTHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   VG++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNNKAASEKEKLYCVYVAVGQKRSTV 175

Query: 203 REFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +T+
Sbjct: 176 AQLVQILAEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLTK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   
Sbjct: 296 VSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D      +++   + + LKQS 
Sbjct: 356 LAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEILKQSQ 394


>gi|3273576|gb|AAC24770.1| F1-ATPase alpha subunit [Gymnostachys anceps]
          Length = 421

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 169/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEF---FSGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D +    +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQ 402


>gi|34539257|gb|AAQ74512.1| F1-ATPase alpha subunit [Clintonia borealis]
          Length = 403

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 23/405 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQIISEANAMEYSILVAATASDPAPLQFVAPYSGCAMGEYFRDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSSKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 LAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 397


>gi|57868908|gb|AAW57450.1| ATP synthase alpha subunit [Rhododendron impeditum]
          Length = 395

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/403 (23%), Positives = 168/403 (41%), Gaps = 23/403 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  SLG  +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGSLGDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             SL   + ++ E   +     +   +D      +++   + +
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 395


>gi|254491215|ref|ZP_05104396.1| ATP synthase F1, alpha subunit [Methylophaga thiooxidans DMS010]
 gi|224463728|gb|EEF79996.1| ATP synthase F1, alpha subunit [Methylophaga thiooxydans DMS010]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 186/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I  ++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSAEISDLIKKRIESFDGATEARTEGTIVGVSDGIVRIHGLAD-VMSGEMLEFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
            +  G  + +  D V    +G  + ++ GD V   GR    P      GRV+++LG+PID
Sbjct: 58  -NTFGMALNLERDSVGAVVLGDYQHLTEGDKVKCTGRILEVPTGESMLGRVVDSLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  I    P  + RQ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 117 GKGEIN-AESSSPIEKVAPGVIARQSVDQPIQTGLKSIDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K +   +G++   +   +         + +V+V A + +S  L+
Sbjct: 176 TAIAIDAIINQKGTGVKCVYVAIGQKASSIANVVRKLEEHGALEHTVIVAAAASDSAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  KG++ L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 FIAPYAGCSMGEYFRDKGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERSARVNADYVEQITNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGLSVSRVGGSAQTKIIKKLGGGIRLDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      + +   + + +KQ+     S
Sbjct: 413 LDEATRAQIGRGQRVTELMKQAQYQPLS 440


>gi|157804175|ref|YP_001492724.1| F0F1 ATP synthase subunit alpha [Rickettsia canadensis str. McKiel]
 gi|166201675|sp|A8F006|ATPA_RICCK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157785438|gb|ABV73939.1| F0F1 ATP synthase subunit alpha [Rickettsia canadensis str. McKiel]
          Length = 512

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 101/435 (23%), Positives = 177/435 (40%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + ++      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVITVGDGIAKIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G   ++  GD V        +       GRV++  G PIDG   +
Sbjct: 62  LVLNLENDSVSAVIMGDDNQVQQGDNVKRIKEVLAVPVGKALLGRVVDVFGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 ASKEYR-NIEVKAPGIIERASVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAV 180

Query: 180 MFARS----------DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + +           ++V+ AT+ E+ 
Sbjct: 181 DTIINQKQAHLLTNEHDKIYCIYVAIGQKRSSVAQIVRKLEAAGAMGYTIVIAATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  +F 
Sbjct: 241 ALQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDIFF 300

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER       KG+   TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSDAKGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++  S+   + +F E         +   +D      
Sbjct: 361 IRPAVNVGISVSRVGSAAQIKAMKQVAGSVKLELAQFRELE---SFSQFESDLDPTTKAQ 417

Query: 407 VHQVPIIYDFLKQSP 421
           +     + + LKQ+ 
Sbjct: 418 IDHGKRLVEILKQAQ 432


>gi|28198346|ref|NP_778660.1| F0F1 ATP synthase subunit alpha [Xylella fastidiosa Temecula1]
 gi|182680987|ref|YP_001829147.1| F0F1 ATP synthase subunit alpha [Xylella fastidiosa M23]
 gi|81585792|sp|Q87E88|ATPA_XYLFT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739958|sp|B2I862|ATPA_XYLF2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|28056416|gb|AAO28309.1| ATP synthase alpha chain [Xylella fastidiosa Temecula1]
 gi|182631097|gb|ACB91873.1| ATP synthase F1, alpha subunit [Xylella fastidiosa M23]
 gi|307579455|gb|ADN63424.1| F0F1 ATP synthase subunit alpha [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 515

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 100/440 (22%), Positives = 187/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L +   + +         G ++S++     +  L+     G+ +    K    
Sbjct: 6   NPSEISELIKTRIEQVKLSAESRNEGTVTSVSDGIVRIFGLAD-AMQGEMIELPNK---T 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  YALALNLERDSVGAVVLGDYEHLREGDVAKTTGRILEVPVGKSLLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 TLGPT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              ++ ++     K +   +G++   +   +      D L  ++VV AT+ ES  L+ ++
Sbjct: 181 AIDTVISQKHTGIKCVYVAIGQKSSTIANIVRKLEENDALDHTIVVAATASESAALQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYAGCTMGEYFMDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTQGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 TTRKQLERGQRVTELMKQKQ 437


>gi|242241385|ref|YP_002989566.1| F0F1 ATP synthase subunit alpha [Dickeya dadantii Ech703]
 gi|242133442|gb|ACS87744.1| ATP synthase F1, alpha subunit [Dickeya dadantii Ech703]
          Length = 513

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-NDGFSPVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQYAPLS 440


>gi|27461609|gb|AAM95221.1| ATPase F1 alpha subunit [Thamnochortus cinereus]
          Length = 417

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIXRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESDTLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|34539419|gb|AAQ74593.1| F1-ATPase alpha subunit [Potamogeton natans]
          Length = 416

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 174/411 (42%), Gaps = 22/411 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +          L+  A+ +     +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNATAKENEKLYCVYVAIG 176

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 177 QKRSTVAQLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCALGEYFRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER     +E   G++TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVR 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 357 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 404


>gi|50364928|ref|YP_053353.1| F0F1 ATP synthase subunit alpha [Mesoplasma florum L1]
 gi|81612931|sp|Q6F204|ATPA_MESFL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|50363484|gb|AAT75469.1| ATP synthase alpha chain [Mesoplasma florum L1]
          Length = 525

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 184/432 (42%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  N++ ++++ E   KN        + G + +I      +  L + +  G+ ++     
Sbjct: 1   MALNIKEISEVIEKQIKNYGKDIIEAEQGSVVTIGDGVSLIYGLDKALM-GELLIFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPID 114
            D  G V+ +    V    +G  + I  GD+V   G+           GRV+NALG+PID
Sbjct: 58  -DVYGMVLSLEEGAVGAVILGDYKLIKEGDIVKRTGKVVETPVGDAMIGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
            +  + K   S  +       M R+ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 NNGPI-KTKKSKPVERIATGVMARKSVSQPLETGILGIDASIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +      K I   +G++   + + +E       ++ + VV A + +S  L+
Sbjct: 176 TAVAIDTIINQKGKNVKCIYVSIGQKDSTIAQVVEKLKKFGAMEYTTVVNAGASDSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTI E +   G++VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YLAPYTGVTIGEEWMENGEDVLIVYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     ++   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P
Sbjct: 296 RLLERAARVNEKFGGGSITALPIIETQASDISAYIPTNVISITDGQIFLSSDLFMAGIRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  +L   + ++ E         +   +D      +  
Sbjct: 356 AINIGPSVSRVGSSAQIKAVKQVSGTLKLELAQYYELE---AFSKFGSDLDESTKATLDH 412

Query: 410 VPIIYDFLKQSP 421
              I   L Q  
Sbjct: 413 GARIIQMLVQRQ 424


>gi|20146606|gb|AAM12457.1| ATP synthase alpha subunit [Planchonella obovata]
          Length = 399

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNPRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +     +   +D      +++   + +
Sbjct: 356 MKQVCGSSQLELAQYRE---VAAFAQFGSDLDAATQTLLNRGARLTE 399


>gi|329768924|ref|ZP_08260351.1| ATP synthase subunit alpha [Gemella sanguinis M325]
 gi|328836641|gb|EGF86299.1| ATP synthase subunit alpha [Gemella sanguinis M325]
          Length = 500

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 172/424 (40%), Gaps = 14/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L    E+Y   +     G +  +      V  L++ +  G+ V         +G    
Sbjct: 10  ALLKSQIENYQFEVKSTDVGSVIEVGDGIARVYGLNEIMS-GELVEFTKTG--VMGLAQN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I  +G   +I  GD V   GR   +       GRV++ LG+P+DG   +    
Sbjct: 67  LEDTNVGIVILGPTTDIKEGDEVRRTGRVMDVPVGEELIGRVVDPLGQPVDGRGPINITK 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
               I S     M R+ V   F+TGI+ ID   P+  GQR  +      GK+ +   S+ 
Sbjct: 127 -RRPIESPAVGVMGRKSVSVPFQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVAIDSIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           A+       I   +G++   VR  +E          ++VV A + +   L  +AP   V 
Sbjct: 186 AQKGQDVICIYVAIGQKESTVRSVVETLKEHGALDYTIVVTAAASQPAPLLYIAPYAGVA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE F   G +V+++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 246 MAEEFMFNGKDVVIVYDDLSKQAAAYRELSLLLKRPPGREAYPGDVFYLHSRLLERAARV 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            ++   G+ITA+  V     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 306 NEDFGGGSITALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGIRPAINAGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D    + + +     + LK
Sbjct: 366 RVGGSAQIKAMKKVSGTLRLDLASYRELESFAQFG---SDLDPATREKLERGKRTVEVLK 422

Query: 419 QSPS 422
           Q   
Sbjct: 423 QDLH 426


>gi|256850899|ref|ZP_05556288.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260661113|ref|ZP_05862027.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 115-3-CHN]
 gi|282934189|ref|ZP_06339467.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
 gi|256615961|gb|EEU21149.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260548050|gb|EEX24026.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 115-3-CHN]
 gi|281301803|gb|EFA94069.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
          Length = 504

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 183/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   ++      + + G I+ +         L+  V   + +  +  +
Sbjct: 1   MSIKAEEISSLIKKQLEHFDDKLDIDEVGVITYVGDGIARAHGLN-NVLANELLEFENGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+D
Sbjct: 60  ---YGIAQNLETNDVGIIILGKYDNIREGDRVKRTGRIMEVPVGEALIGRVVNPLGQPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GLGEI-KTDKTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           +   + ++  +       I   +G++   +R  +E       +  ++VV A       L 
Sbjct: 176 TSLAIDTILNQKGQDVICIYVAIGQKESTIRSQVETLKRFGAMDYTIVVEAGPSAPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLIRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSAKLSDKLGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D  ASVSR+   A     KK+  +L   +  F E       G     +D      +++
Sbjct: 356 AIDAGASVSRVGGSAQIKAMKKVAGTLRVDLASFRELESFAQFG---SDLDQATQAKLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I + LKQ   +    +
Sbjct: 413 GRRIVEVLKQPLHEPLPVE 431


>gi|89112848|gb|ABD61036.1| ATPase alpha subunit [Vriesea splendens]
          Length = 427

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 167/412 (40%), Gaps = 22/412 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 3   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 58

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 59  GDLVKRTGSIVDVPAGKPMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVII 192
           +  +TG++ +D   P+  GQR  +      GK+ +      +                + 
Sbjct: 118 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLYCVY 177

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 178 VAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 237

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA
Sbjct: 238 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTA 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
              +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     
Sbjct: 298 YPVIETLAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAM 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 358 KQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 406


>gi|324986348|ref|YP_004276220.1| ATP synthase CF1 alpha subunit [Pinus lambertiana]
 gi|323514197|gb|ADX89744.1| ATP synthase CF1 alpha subunit [Pinus lambertiana]
          Length = 507

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 100/424 (23%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +    
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISAXX 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 XXXXXXXXX-XXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|170751942|ref|YP_001758202.1| flagellum-specific ATP synthase [Methylobacterium radiotolerans JCM
           2831]
 gi|170658464|gb|ACB27519.1| flagellar protein export ATPase FliI [Methylobacterium
           radiotolerans JCM 2831]
          Length = 450

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 173/410 (42%), Positives = 241/410 (58%), Gaps = 6/410 (1%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGE 79
             G + +I  +   V      + LG  V  +G N   L   +VI    D     P G  E
Sbjct: 27  TFGRVVAIRGLLVEVAGPVAAMRLGGRVDVEGANGHGLVPCEVIGFQGDRALAMPFGSLE 86

Query: 80  EISLGDL--VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
            +  G    V       I PS  W GRVI+ALG+P+DG   L +G     + +  PPA  
Sbjct: 87  GVRRGCPAYVRDESAGAIRPSGAWLGRVIDALGRPVDGLGPLAQGPDVYPLRADPPPAHA 146

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I LVGE
Sbjct: 147 RTRVGGPLDLGVRCINTFLTMCAGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGE 206

Query: 198 RGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV+EF++D LG   L +SVVVVATSDE  ++R+ A    +++AE+F  +G  VL ++
Sbjct: 207 RGREVQEFLQDDLGAAGLARSVVVVATSDEPALMRRNAAYVTLSVAEHFRDQGAKVLCMI 266

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DSITRFA + R+I   +GE P A+GY  +VFSELPRLLER GP   + G I+A+ +VLV+
Sbjct: 267 DSITRFAMAQRDIGLAAGEPPTAKGYTPTVFSELPRLLERAGPGVGQ-GTISALFTVLVE 325

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR   ++       +V   
Sbjct: 326 GDDHNEPVADAVRGILDGHIVMERAIAERGRYPAINVLRSVSRTMPRSCDPAYLPVVRRA 385

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             L+  + +  ++  +G YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 386 RRLLSTYADMEELIRLGAYRAGSSQEVDEAVALMPHLEAFLGQGKEEATS 435


>gi|39546123|gb|AAR28045.1| ATP synthase alpha subunit [Aquilegia canadensis]
          Length = 420

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 171/405 (42%), Gaps = 23/405 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L++ +  G+ V      S   G  + +  + V I   G    I  G+LV   G
Sbjct: 1   GIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGELVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKAMLGRVVDALGVPIDGRGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--------SMFARSDCFD---KVIISLVGERG 199
            ++   P+  GQR  +      GK+ +          M +R    +     +   +G++ 
Sbjct: 116 AVNTLVPIGRGQRQLIIGDRQTGKTAIAIDTILNQKQMNSRGTSENETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 397


>gi|251791746|ref|YP_003006467.1| F0F1 ATP synthase subunit alpha [Dickeya zeae Ech1591]
 gi|247540367|gb|ACT08988.1| ATP synthase F1, alpha subunit [Dickeya zeae Ech1591]
          Length = 513

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    + +  P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPL-EHDGFSPVETIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|213963694|ref|ZP_03391945.1| ATP synthase F1, alpha subunit [Capnocytophaga sputigena Capno]
 gi|213953689|gb|EEB65020.1| ATP synthase F1, alpha subunit [Capnocytophaga sputigena Capno]
          Length = 526

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 168/450 (37%), Gaps = 36/450 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   +   + + G +  +      +  LS     G+ V          G V+ +  D
Sbjct: 15  EQLAHFDANASLEEVGTVLQVGDGIARIFGLS-NAQYGELVKFDNG---LQGIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G   +I  GD V   G    I+      GRV+N LG+PIDG   +      M 
Sbjct: 71  NVGITLLGPSTDIKEGDTVKRTGLIASINVGEGIVGRVVNTLGQPIDGKGPITGKLYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIFRQPVNEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          + +V A + +   ++  AP    
Sbjct: 191 FYDAGNPVYCIYVAIGQKASTVAGITKTLEDAGALAYTTIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VIGDDTIARQMNDLPESIAPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +
Sbjct: 371 SDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQYRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           D      + +     + LKQ  +D    + 
Sbjct: 428 DAATMGVIEKGKRNVEILKQPQNDPYPVES 457


>gi|148652007|ref|YP_001279100.1| F0F1 ATP synthase subunit alpha [Psychrobacter sp. PRwf-1]
 gi|172048448|sp|A5WBV9|ATPA_PSYWF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148571091|gb|ABQ93150.1| ATP synthase F1, alpha subunit [Psychrobacter sp. PRwf-1]
          Length = 514

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 188/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++QL +   ++L         G I  ++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISQLIKQRIQDLDTSATAKNEGTIVKVSDGIVQIHGL-EDAMYGEMIEFEG--- 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           D  G  + +  D V    +G    +  G   +  GR   +       GRV++ALG PIDG
Sbjct: 59  DVYGMALNLEQDSVGAVVLGDYLGLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+ ++    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VVVA++ E   L+ 
Sbjct: 178 AMAIDAIIAQKNSGIKCVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNAAYVEEFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SSLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +     + + +KQ      S
Sbjct: 415 DDATKQQLDHGERVTELMKQKQYQPMS 441


>gi|20146574|gb|AAM12441.1| ATP synthase alpha subunit [Galax urceolata]
          Length = 399

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNK-IQAGEMVEFA---SGVKGIALTLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG   LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGPLGDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTEESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANAMEYSILVAATAGDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HSLIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +     +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 399


>gi|164685558|gb|ABY66725.1| atp1 [Mitrastemon yamamotoi]
          Length = 413

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 169/412 (41%), Gaps = 23/412 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   VG+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRAASESETLYCVYVAVGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQICG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           SL   + ++ E   +     +   +D      +++   + +  KQ      S
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYAPLS 404


>gi|89112842|gb|ABD61033.1| ATPase alpha subunit [Chamaedorea tenella]
          Length = 431

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 170/417 (40%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++       L+ S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILPEAFALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A
Sbjct: 297 GSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 QLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|169303162|gb|ACA53178.1| ATP synthase alpha subunit [Aglaothamnion sepositum]
          Length = 404

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 95/404 (23%), Positives = 166/404 (41%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L +    G+ +         +G  + +  D V +  +G G 
Sbjct: 7   VANVGTVLQVGDGIARVYGLDE-AMAGELLQFD-DEEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GR+++ L +PID   +  K D +  I S  P  + R
Sbjct: 65  NILEGSSVQSTGKIAQIPVGEEFLGRIVDPLAQPIDAKGT-PKSDETRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +         + +++V A +D    L+ +AP T   +AEYF  +G   L+I
Sbjct: 184 QKASSVAQIVSVLEEKGALEYTIIVAANADNPATLQYIAPYTGAALAEYFMYRGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|7524980|ref|NP_050078.1| ATPase subunit 1 [Dictyostelium discoideum]
 gi|74949694|sp|Q9XPJ9|ATPAM_DICDI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|4958883|dbj|BAA78060.1| ATPase subunit 1 [Dictyostelium discoideum]
          Length = 519

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 115/425 (27%), Positives = 190/425 (44%), Gaps = 16/425 (3%)

Query: 5   LETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L+ +  + + Y+ N V    G +  I      V+ LSQ + +G+ V   GKN    G  +
Sbjct: 24  LQYIKAVTQKYNLNKVSSKYGKVLFIKDGVVKVSGLSQ-IKIGEKVEFVGKN--LYGMAL 80

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V I   G    I  G +V    + F I       GRV++ LG+PIDG   L   
Sbjct: 81  NLEATSVGIVIFGEDTAIYEGVIVKRCEQNFAIKVDKTMLGRVVDVLGQPIDGLGELKDT 140

Query: 123 DLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +    +  K P  + R+ V +   TG++++D   P+  GQR  +      GKS +   
Sbjct: 141 KTTRVMSVERKAPGIVTRKSVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSAIAVD 200

Query: 181 FARSDCFDK---VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
              +   +K    I   VG++   VR  +E       L+ ++VVV+T+ ++  L+ +AP 
Sbjct: 201 AILNQQVNKDIVCIYVAVGQKKSTVRRLVEMLNTKGALEYTIVVVSTASDAAPLQFLAPY 260

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T  TI EYF  +G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 261 TGCTIGEYFRDEGKHALIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLER 320

Query: 297 IGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                ++ G    TA   V     + +  I  ++ SI DG I L + L  +G  P V+  
Sbjct: 321 AAKLNEKYGCGSLTAFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVG 380

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A SA  KKL  +L   + ++ E         +    D +  + + +  +  
Sbjct: 381 LSVSRVGSAAQSAVMKKLAGALKLELAQYREL---ARFEQFSSNADAVTTQILKKGKLTI 437

Query: 415 DFLKQ 419
           + LKQ
Sbjct: 438 ELLKQ 442


>gi|260866402|ref|YP_003232804.1| putative lateral flagellum-specific ATP synthase [Escherichia coli
           O111:H- str. 11128]
 gi|257762758|dbj|BAI34253.1| predicted lateral flagellum-specific ATP synthase [Escherichia coli
           O111:H- str. 11128]
 gi|323178505|gb|EFZ64083.1| flagellum-specific ATP synthase [Escherichia coli 1180]
          Length = 445

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 229/425 (53%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++D +TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDFLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|229823981|ref|ZP_04450050.1| hypothetical protein GCWU000282_01285 [Catonella morbi ATCC 51271]
 gi|229786335|gb|EEP22449.1| hypothetical protein GCWU000282_01285 [Catonella morbi ATCC 51271]
          Length = 506

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/427 (24%), Positives = 180/427 (42%), Gaps = 16/427 (3%)

Query: 1   MQKNLE-TLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           M + LE  L Q    + S++ + + G ++ I      V  L + V  G+ V     +   
Sbjct: 1   MTERLEDRLRQQIRRFRSQDNLEEIGTVTFIGDGIARVIGL-ENVMSGEMVEFANGS--- 56

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
           +G V  +  + V I   G  E I  GDLV   G+   +       GRV++ LG+P+DG  
Sbjct: 57  IGMVQNLESNDVGIIIFGKYENIHEGDLVRRLGKIMEVPVGPGLLGRVVDPLGRPLDGLG 116

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   + +  + +  P  M+RQ V +  +TGI+ +D   P+  GQR  +      GK++L
Sbjct: 117 RID-SNRTRPVETPAPGIMDRQSVNEPMQTGIKAVDALVPIGRGQRELIIGDRKTGKTSL 175

Query: 178 LSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
                 +        I   +G++   V+  +           +VVV A++ +   L  +A
Sbjct: 176 AVDAIINQKGKDVICIYVAIGQKESTVKNLVNTLEQYGAMDYTVVVTASASQPAPLLYLA 235

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +   I E F   G +VL++ D +++ A + RE++      P    YP  VF    RLL
Sbjct: 236 PYSGTAIGEEFMYNGQHVLVVYDDLSKQAAAYREMSLLLKRPPGREAYPGDVFYLHSRLL 295

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER          G++T++  V     + +  I  +V SI DG I L   L   G  P ++
Sbjct: 296 ERSAKLSDALGGGSLTSLPIVETQAGDISAYIPTNVISITDGQIFLESDLFFSGIRPAIN 355

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  +L   +  + E         +   +D      +++   
Sbjct: 356 AGLSVSRVGGAAQLKPMKQVSGTLRIDLASYRELE---AFTQFGSDLDAATQHKLNRGKR 412

Query: 413 IYDFLKQ 419
               LKQ
Sbjct: 413 TVAVLKQ 419


>gi|152978012|ref|YP_001343641.1| F0F1 ATP synthase subunit alpha [Actinobacillus succinogenes 130Z]
 gi|171472938|sp|A6VL59|ATPA_ACTSZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|150839735|gb|ABR73706.1| ATP synthase F1, alpha subunit [Actinobacillus succinogenes 130Z]
          Length = 513

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS+ V  G+ +      
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSE-VMQGEMIALP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRYAMALNLERDSVGAVVMGPYIDLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-KNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K I   +G++   +   +     +     +++VVA++ ES  L+
Sbjct: 176 TALAIDTIINQKDSGIKCIYVAIGQKASTIANVVRKLEENGALANTIIVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGVRPAVNPGISVSRVGGAAQTKVVKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTEMLKQKQYAPLS 440


>gi|300777807|ref|ZP_07087665.1| ATP synthase F1 sector alpha subunit [Chryseobacterium gleum ATCC
           35910]
 gi|300503317|gb|EFK34457.1| ATP synthase F1 sector alpha subunit [Chryseobacterium gleum ATCC
           35910]
          Length = 525

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 104/449 (23%), Positives = 176/449 (39%), Gaps = 36/449 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   +++ V + G + +I      V  L + V  G+ V     +SD  G V+ +  D 
Sbjct: 16  QLANFDTQSNVEEVGTVLTIGDGIARVYGL-ENVQYGELVKF---SSDVEGIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  + +  GD V    R   I       GRV++ LG PIDG   +      M +
Sbjct: 72  VGVALLGESKLVKEGDTVRRTNRISSIKVGEGMLGRVVDTLGNPIDGKGPITGDLYEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF- 187
             K P  + RQ V +  ++GI  ID   P+  GQR  +      GK+T+      +    
Sbjct: 132 ERKAPGVIFRQPVTEPLQSGIVAIDSMIPVGRGQRELIIGDRQTGKTTVAIDTIINQKEF 191

Query: 188 ------DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
                    I   +G++   V + ++       L  +V+V A + +   ++  + +    
Sbjct: 192 FDAGKPVYCIYVAIGQKASTVAQIVKTLSDKGALAYTVIVAANASDPVPMQVYSAMAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E+F   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEFFRDTGRPALIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKV 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 IADDEIAKQMNDLPESLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     KK+  +L     +++E         +   +D
Sbjct: 372 DLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQYKELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
                 + +     + LKQ  +     D 
Sbjct: 429 ASTLAVISKGERNVELLKQPVNSPLPVDS 457


>gi|71276025|ref|ZP_00652306.1| ATP synthase F1, alpha subunit [Xylella fastidiosa Dixon]
 gi|71899446|ref|ZP_00681604.1| ATP synthase F1, alpha subunit [Xylella fastidiosa Ann-1]
 gi|71163108|gb|EAO12829.1| ATP synthase F1, alpha subunit [Xylella fastidiosa Dixon]
 gi|71730759|gb|EAO32832.1| ATP synthase F1, alpha subunit [Xylella fastidiosa Ann-1]
          Length = 515

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 100/440 (22%), Positives = 188/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L +   + +         G ++S++     +  L+     G+ +    K    
Sbjct: 6   NPSEISELIKTRIEQVKLSAESRNEGTVTSVSDGIVRIFGLAD-AMQGEMIELPNK---T 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  + +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  YALALNLERDSVGAVILGDYKHLREGDVAKTTGRILEVPVGKSLLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 ALGPT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              ++ ++ D   K +   +G++   +   +      D L  ++VV AT+ ES  L+ ++
Sbjct: 181 AIDTVISQKDTGIKCVYVAIGQKASTIANIVRKLEENDALDHTIVVAATASESAALQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYAGCTMGEYFMDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTQGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 TTRKQLERGQRVTELMKQKQ 437


>gi|169303180|gb|ACA53187.1| ATP synthase alpha subunit [Callithamnion sp. C1226]
          Length = 404

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 164/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L   V  G+ +         +G  + +  D V +  +G G 
Sbjct: 7   VANVGTVLQVGDGIARVYGLDD-VMAGELLQFD-DQEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID   +    +  + I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGQDFLGRVVNPLAQPIDAKGTPNSSETRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVVCVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF   G   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYTGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|238855949|ref|ZP_04646235.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 269-3]
 gi|260664666|ref|ZP_05865518.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii SJ-7A-US]
 gi|282934356|ref|ZP_06339623.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
 gi|313471883|ref|ZP_07812375.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 1153]
 gi|238831422|gb|EEQ23773.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 269-3]
 gi|239529201|gb|EEQ68202.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 1153]
 gi|260561731|gb|EEX27703.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii SJ-7A-US]
 gi|281301566|gb|EFA93843.1| ATP synthase F1, alpha subunit [Lactobacillus jensenii 208-1]
          Length = 504

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 109/439 (24%), Positives = 182/439 (41%), Gaps = 19/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++ L +   ++      + + G I+ +         L+  V   + +  +  +
Sbjct: 1   MSIKAEEISSLIKKQLEHFDDKLDIDEVGVITYVGDGIARAHGLN-NVLANELLEFENGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G    +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+D
Sbjct: 60  ---YGIAQNLETNDVGIIILGKYDNIREGDRVKRTGRIMEVPVGEALIGRVVNPLGQPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GLGEI-KTDKTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +   + ++  +       I   +G++   VR  +E          ++VV A       L 
Sbjct: 176 TSLAIDTILNQKGQDVICIYVAIGQKESTVRSQVETLKRYGAMDYTIVVEAGPSAPAPLL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + E F   G +VL++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLIRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERSAKLSDKLGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D  ASVSR+   A     KK+  +L   +  F E       G     +D      +++
Sbjct: 356 AIDAGASVSRVGGSAQIKAMKKVAGTLRVDLASFRELESFAQFG---SDLDQATQAKLNR 412

Query: 410 VPIIYDFLKQSPSDLSSED 428
              I + LKQ   +    +
Sbjct: 413 GRRIVEVLKQPLHEPLPVE 431


>gi|187926894|ref|YP_001893239.1| flagellar protein export ATPase FliI [Ralstonia pickettii 12J]
 gi|241665223|ref|YP_002983582.1| ATPase, FliI/YscN family [Ralstonia pickettii 12D]
 gi|187728648|gb|ACD29812.1| flagellar protein export ATPase FliI [Ralstonia pickettii 12J]
 gi|240867250|gb|ACS64910.1| ATPase, FliI/YscN family [Ralstonia pickettii 12D]
          Length = 479

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 159/456 (34%), Positives = 235/456 (51%), Gaps = 27/456 (5%)

Query: 6   ETLAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q A+       VV  G ++ +  +      L   V     V         L +V+ 
Sbjct: 24  SHLRQTAQRARLARPVVTCGKLTRVAGLVMEAVGLKLPVGSACRVELP-HGRHVLAEVVG 82

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRIS---------------PSACWCGRVINAL 109
              +  ++ P      +  G  VF      +                      GRV++A 
Sbjct: 83  FAEERAFLMPQTDLVGVVPGARVFPLEAQHLPADAADPTISHSKFLPVGPRLLGRVVDAN 142

Query: 110 GKPIDGDDSLG-KGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
           G+P+DG   LG   +L+   ++  P   + R+ +E     G+R I+    +  GQR+G+F
Sbjct: 143 GEPLDGKGPLGNPDELAWGTLAPAPLNPLKRKPIENVMDVGVRAINGLLTVGQGQRLGLF 202

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D 
Sbjct: 203 AGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADT 262

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP++R      A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S 
Sbjct: 263 SPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSA 322

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G      +   G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R L
Sbjct: 323 FAKLPALVERAGNGMVDADGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKL 382

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE+G YP +D   S+SR+       ++         L  R++  RD+  +G Y  G D +
Sbjct: 383 AEQGHYPAIDIEQSISRVMSAIVPREQLDTARRFKQLYARYQRNRDLIAVGAYARGSDPV 442

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            D+A+ + P +  FL+Q   +  S    +   +K+Q
Sbjct: 443 TDQAIARYPDMEAFLQQGMFENESR---EHTLQKMQ 475


>gi|6561618|gb|AAF16962.1|AF197630_1 ATPase alpha subunit [Piper betle]
          Length = 422

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 409


>gi|87121035|ref|ZP_01076926.1| ATP synthase subunit A [Marinomonas sp. MED121]
 gi|86163527|gb|EAQ64801.1| ATP synthase subunit A [Marinomonas sp. MED121]
          Length = 514

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 107/447 (23%), Positives = 188/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   +NL V       G I S+      +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKKRIENLDVTSEAQNEGTIVSVADGIVLIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + +  G  V   GR    P      GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVVLGGYQNLVEGQKVKCTGRILEVPIGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + ID   P+  GQR  +     +GK+
Sbjct: 119 KGPVN-AQLTDAVEKVAPGVIERQSVDQPIQTGYKAIDAMVPVGRGQRELIIGDRQVGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++ A+     K +   +G++   +   ++    +   + + VV A + +   +  
Sbjct: 178 ALAIDTIIAQKGSGIKCVYVAIGQKQSTIANVVQKLEENGALEYTTVVSAGASDPASMLY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  T+ EYF  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYTGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER      +              G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNTDYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSLFNAGIRPAMNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 415 DEATRKQLEHGKQVTELMKQKQFSPMS 441


>gi|320527153|ref|ZP_08028340.1| ATP synthase F1, alpha subunit [Solobacterium moorei F0204]
 gi|320132481|gb|EFW25024.1| ATP synthase F1, alpha subunit [Solobacterium moorei F0204]
          Length = 508

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 105/436 (24%), Positives = 179/436 (41%), Gaps = 19/436 (4%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q   E ++ L +D  KN   +      GY+ S+      V  + + +   + +       
Sbjct: 3   QIRPEEISSLIKDQIKNYEQKIQSDDVGYVISVGDGIAMVQGIDKAMS-SELLEFP---H 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
             +G V+ +  D +    +G    I  GD V   GR   +       GRV+NALG+ +DG
Sbjct: 59  GVMGMVLNLEEDHIGAVLLGHDTLIREGDEVKRTGRIVEVPVGDALLGRVVNALGEAVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
            + +     S  I    P  M R+ V +   TG++VID   P+  GQR  +      GK+
Sbjct: 119 GEPIVSTK-SRPIERVAPGVMTRKSVYQPLMTGLKVIDSMIPIGKGQRELIIGDRETGKT 177

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
            +      +        I   +G++   V   ++     D +  + +V A +  S  L+ 
Sbjct: 178 AIAIDAIINQKGKNVNCIYVAIGQKESTVARLVQKLRESDAMAYTTIVNAGASASAPLQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I E +  +G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 238 IAPYAGCAIGEEWMEQGKDVLIVYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 298 LLERAAKLSDALGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQTDLFAAGVRPA 357

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A +   K + S+L   + ++ E   +     +   +D +  K +   
Sbjct: 358 VDSGLSVSRVGSNAQTKAMKSVSSTLKLDLAQYHE---MLSFSQFGSDLDPVTKKILSHG 414

Query: 411 PIIYDFLKQSPSDLSS 426
             + + LKQ      S
Sbjct: 415 AKLTELLKQGQYQPLS 430


>gi|20146596|gb|AAM12452.1| ATP synthase alpha subunit [Myrsine africana]
          Length = 399

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V          G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S+++ AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILIAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|223667976|gb|ACN11584.1| F1-ATPase alpha subunit [Isotria medeoloides]
          Length = 431

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IPAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANAFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 406


>gi|89112856|gb|ABD61040.1| ATPase alpha subunit [Gunnera monoica]
          Length = 438

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      S              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILSQKQMNSRGTSESDT 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 QLKTMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|167644988|ref|YP_001682651.1| flagellum-specific ATP synthase [Caulobacter sp. K31]
 gi|167347418|gb|ABZ70153.1| ATPase, FliI/YscN family [Caulobacter sp. K31]
          Length = 445

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 162/425 (38%), Positives = 245/425 (57%), Gaps = 9/425 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81
            G ++++  +          + +G  V      +  L  +V+        + P G  E +
Sbjct: 17  FGRVAAVNGLLIEARGGLTRLAVGARVEIDRLAAPPLPAEVVGFRETRALLMPFGPVEGV 76

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  +        + P+  W GR+INA G+PIDG   L +G++   + +  PPA  R R
Sbjct: 77  APGAEIKIMPEGAVVRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTPPPPAHARGR 136

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +    G+R +++FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGR
Sbjct: 137 VGERLDLGVRSMNVFTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGR 196

Query: 201 EVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE+    + LK+++VVVATSDE  + R+ A    + I EY   +   VL ++DS+
Sbjct: 197 EVREFIEETLGEEGLKRAIVVVATSDEPALTRRQAAYMTLAICEYLRDQDQEVLCLMDSV 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVL 314
           TRFA + REI   +GE P  +GY  +VF+ELP+LLER GP          G ITA+ +VL
Sbjct: 257 TRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRADGTTAGPITALFTVL 316

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+HN+PIAD+ R ILDGHIV+ R++AE GR+P ++ L S+SR      + +E+++V 
Sbjct: 317 VDGDDHNEPIADATRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQTPEEREVVK 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           +    +  +    ++  IG YR G D I+D+A+   P I  FL Q   + +S +D F  +
Sbjct: 377 AARQTMAAYSNMEELIRIGAYRAGADPIIDRAIRLNPAIEAFLGQDKDEATSLDDSFGYL 436

Query: 434 TKKLQ 438
              L+
Sbjct: 437 AHILR 441


>gi|169303154|gb|ACA53174.1| ATP synthase alpha subunit [Aglaothamnion callophyllidicola]
          Length = 404

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L + V  G+ +         +G  + +  D V +  +G G 
Sbjct: 7   VANIGTVLQVGDGIARVYGLDE-VMAGELLQFD-DPEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID    +     +  I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGQDFLGRVVNPLAEPIDAKG-IPNSSETRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T  ++AEYF   G   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGASLAEYFMYTGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSDLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|294143108|ref|YP_003559086.1| ATP synthase F1 subunit alpha [Shewanella violacea DSS12]
 gi|293329577|dbj|BAJ04308.1| ATP synthase F1, alpha subunit [Shewanella violacea DSS12]
          Length = 513

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYATLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V +  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPID-NDGFSPVEVIAPGVIERKSVSQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + +   K +   VG++   V   +           ++VVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKNTGIKCVYVAVGQKASTVANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNVEYVEKFTKGKVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDEATRAQLEHGERVTELMKQKQ 435


>gi|284007075|emb|CBA72350.1| F0F1 ATP synthase subunit alpha [Arsenophonus nasoniae]
          Length = 516

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      +  L++ V  G+ +   G  
Sbjct: 4   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVNDGIIRIHGLAE-VMQGEMIALPG-- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 61  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 120 GKGPV-EHDGFSAVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 178

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VVVAT+ ES  L+
Sbjct: 179 TALAVDAIINQRDSEIKCIYVAIGQKASTIANVVRKLEEHGALENTIVVVATASESAALQ 238

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 239 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 298

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 299 RLLERAARVNAEYVEKFTNGEIKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 358

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 359 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 415

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K ++    + + LKQ  
Sbjct: 416 LDDATRKQLNHGQKVTELLKQKQ 438


>gi|88608054|ref|YP_506031.1| ATP synthase F1, alpha subunit [Neorickettsia sennetsu str.
           Miyayama]
 gi|115312256|sp|Q2GER5|ATPA_NEOSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|88600223|gb|ABD45691.1| ATP synthase F1, alpha subunit [Neorickettsia sennetsu str.
           Miyayama]
          Length = 509

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 181/439 (41%), Gaps = 23/439 (5%)

Query: 5   LETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L  + +  +D+ +     + G + S+         L +     + VV        +G + 
Sbjct: 11  LRIIKEKIKDFDQQIFSEEIGEVISVKDGVVIACGL-ENAEFNEKVVFPNGE---IGLIQ 66

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  D V I  +   ++I  GD V       RI       GRVI+ LG P+DG   +   
Sbjct: 67  SIEYDHVGIVILTNTQDIKEGDTVRRTKEALRIPVGKKLLGRVIDPLGNPLDGAGQIF-A 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  K P  ++RQ V++  +TGI+VID+  P+  GQR  +      GK+T+     
Sbjct: 126 DAYSPIEVKAPGILDRQSVKEPLQTGIKVIDLLIPIGRGQRELIIGDRQTGKTTIALDSI 185

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            +          +     +   +G++   V   ++          + +V+A + +S   +
Sbjct: 186 INQRDINKNLPDEKKLYCVYVAIGQKCSTVARIMKTLQEQGAMDYTTIVLAGASDSAQSQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    +I EYF   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 246 FLAPYAGCSIGEYFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHS 305

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L  +G  P
Sbjct: 306 RLLERAAKMSDKHGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNKGVKP 365

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++  S+   + ++ E         +   +D      + +
Sbjct: 366 AVNVGLSVSRVGSAAQIKAIKQVARSIKLELAQYREME---AFAQFGADLDETTQALLEK 422

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ+  +    +
Sbjct: 423 GKKLTELLKQNQHETLPVE 441


>gi|304404247|ref|ZP_07385909.1| ATPase, FliI/YscN family [Paenibacillus curdlanolyticus YK9]
 gi|304347225|gb|EFM13057.1| ATPase, FliI/YscN family [Paenibacillus curdlanolyticus YK9]
          Length = 441

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 161/421 (38%), Positives = 248/421 (58%), Gaps = 10/421 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYICPVGI 77
           V   G ++ +     TV        +G+   ++  K +  L  +V+    + V + P+G 
Sbjct: 21  VRVNGKVTQVIG--LTVESEGPDASIGEVCYIYPTKGAKPLKAEVVGFKDNKVILMPLGE 78

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E I  G  V   G+   +   +   G+V++ LG+P+DG     +   S        P M
Sbjct: 79  LESIGPGCDVVGTGKPLTVQVGSELLGKVLDGLGQPLDGSFIPSRMPHSSTNNVPNNPLM 138

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R RV++    G+R ID    +  GQR+G+FAGSG+GKSTLL M AR+   D  +I+L+G
Sbjct: 139 -RPRVKQPLGIGVRAIDGLLTVGQGQRVGIFAGSGVGKSTLLGMIARNTSADVNVIALIG 197

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV EFI +D   + L +SVV+VATSD+  ++R    L A TIAEYF  +G NV+L+
Sbjct: 198 ERGREVLEFIEKDLGPEGLARSVVIVATSDQPALIRMKGALIATTIAEYFRDRGLNVMLM 257

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A ++RE+    GE P  RGY  SVF+ LP+LLER G      G+ITA  +VLV
Sbjct: 258 MDSVTRYAMALREVGLAIGEPPATRGYTPSVFAALPKLLERAGTGPT--GSITAFYTVLV 315

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGHIVL+R LA +G +P +D LAS+SR+  +  + +++   +S
Sbjct: 316 DGDDMNEPIADAVRGILDGHIVLSRDLAHQGHFPAIDVLASISRVMKEIVTDEQQDAANS 375

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
           L  L+  ++ + D+  IG Y+ G +  +D+A+  +  I  + +Q  ++ +  ED  Q++ 
Sbjct: 376 LKGLLATYKSSEDLINIGAYQYGSNAKIDQAIEAIDEIRAYTRQKTNEKVILEDAQQQLI 435

Query: 435 K 435
           +
Sbjct: 436 Q 436


>gi|157377618|ref|YP_001476218.1| F0F1 ATP synthase subunit alpha [Shewanella sediminis HAW-EB3]
 gi|189081319|sp|A8G1W7|ATPA_SHESH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157319992|gb|ABV39090.1| H(+)-transporting two-sector ATPase [Shewanella sediminis HAW-EB3]
          Length = 513

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSETRNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYASLAEGDKVKTTGRILEVPVGNGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPI-EHDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAVGQKASTIANVVRKLDEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  +   G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTKGEVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|317129206|ref|YP_004095488.1| ATPase, FliI/YscN family [Bacillus cellulosilyticus DSM 2522]
 gi|315474154|gb|ADU30757.1| ATPase, FliI/YscN family [Bacillus cellulosilyticus DSM 2522]
          Length = 437

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 154/413 (37%), Positives = 240/413 (58%), Gaps = 11/413 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSD---NLGQVIRINLDIVYICPVGI 77
             G +S +  +   +      V +GD   +  GK       + +V+    + V + P   
Sbjct: 17  HYGKVSQVVGLM--IESKGPRVSVGDICYILVGKTKPFRKIMVEVVGFRDENVLLMPFDA 74

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
             EI+ G LV    +  +I       G+V++ LG+P+D    L  G  +    +  P  +
Sbjct: 75  TTEIAPGSLVEATNKPLQIKIGTSLVGQVVDGLGRPLDHT-ELKNGLTNFPTDNTPPNPL 133

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R+ +    GIR ID    +  GQRIG+FAGSG+GKSTL++M A++   D  +I+L+G
Sbjct: 134 KRPRITEALSLGIRAIDGLFTVGKGQRIGIFAGSGVGKSTLMAMIAKNSEADINVIALIG 193

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVR+F+  D   D LK ++VVVATSD+  ++R    +TA  IAE+F ++G NV L+
Sbjct: 194 ERGREVRDFVERDLNEDGLKNTIVVVATSDQPALMRIKGAMTATAIAEFFRNQGLNVNLM 253

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR A + REI    GE P  +GY  SVF+ LP+LLER G +E   G ITA  +VLV
Sbjct: 254 MDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFATLPKLLERSGTNE--YGTITAFYTVLV 311

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGH+VL+R LA +G++P ++ L S+SRL +   + + K     
Sbjct: 312 DGDDLNEPIADTVRGILDGHLVLDRKLANKGQFPAINVLTSISRLMNDLVTPEHKLAADK 371

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           + + + ++ ++ D+  IG Y+ G +  LD+A+   P + +++KQ   +  + D
Sbjct: 372 VRNYLSQYYDSEDLISIGAYKRGTNKDLDEAIKLYPQVINYIKQDLHEQITID 424


>gi|225870301|ref|YP_002746248.1| ATP synthase alpha chain [Streptococcus equi subsp. equi 4047]
 gi|254808114|sp|C0M718|ATPA_STRE4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|225699705|emb|CAW93434.1| ATP synthase alpha chain [Streptococcus equi subsp. equi 4047]
          Length = 501

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 175/428 (40%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMS-GELLEFSNG---TFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 122 ETTGFR-PVETPAPGVMQRKSVFESLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVTASASQPSPLLFIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQEDLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     K++  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKRVAGTLRLDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EILKQPLH 425


>gi|289665460|ref|ZP_06487041.1| F0F1 ATP synthase subunit alpha [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 515

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|57868916|gb|AAW57454.1| ATP synthase alpha subunit [Shortia uniflora]
          Length = 398

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 166/406 (40%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ LG PIDG   LG  +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGPLGDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVKIISEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 398


>gi|296389919|ref|ZP_06879394.1| type III secretion system ATPase [Pseudomonas aeruginosa PAb1]
          Length = 440

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 155/419 (36%), Positives = 232/419 (55%), Gaps = 12/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEI 81
           G ++ +         +   V +G+    +  +     L +VI        + P+G    +
Sbjct: 26  GRVTQVAGTLLK--AVVPGVRIGELCQLRNPDQSLALLAEVIGFQQHQALLTPLGEMLGV 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   R++      G+V++ LG+P DG            +    P  M+R+ 
Sbjct: 84  SSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPA-AWYPVYRDAPQPMSRRL 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +E+    G+R ID       GQR+G+FA +G GKSTLL+   R+   D  +++LVGERGR
Sbjct: 143 IERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGR 202

Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFIE D     L++SV+VVATSD   + R  A   A +IAEYF  +G  VLL++DS+
Sbjct: 203 EVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSL 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G SE  +G+ITA+ +VLV+GD+
Sbjct: 263 TRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSE--RGSITALYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            ++P+AD  RSILDGHIVL+R LA    YP +D L SVSR+ ++    D++     L   
Sbjct: 321 MSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREW 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           + ++EE   +  IG Y+ G D   D+A+ ++  I  +L+Q   + S    + +   +L+
Sbjct: 381 LAKYEEVELLLKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETSD---YAQACAQLR 436


>gi|226226120|ref|YP_002760226.1| ATP synthase alpha chain [Gemmatimonas aurantiaca T-27]
 gi|226089311|dbj|BAH37756.1| ATP synthase alpha chain [Gemmatimonas aurantiaca T-27]
          Length = 523

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 91/428 (21%), Positives = 169/428 (39%), Gaps = 24/428 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           V + G +  +      V  L + V  G+ +      +  +  G  + +  D +    +G 
Sbjct: 30  VEEVGSVLEVKDGIARVYGLGK-VMAGEMLEFTSSETKQVITGMALNLEEDNIGAVILGD 88

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
             ++  GD V    R   +       GRV++ LG+PIDG   +       ++ S  P  +
Sbjct: 89  YLQLKEGDEVRRTARVLEVPVGPELIGRVVDPLGRPIDGLGEIRTSHFR-KVESPAPGII 147

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD--CFDKVIISL 194
            RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      +        +   
Sbjct: 148 VRQPVKEPLQTGIKAIDSMIPIGRGQRELIIGDRSTGKTAVAIDTIINQKGQGVICVYVA 207

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           +G++   +   +E        + ++VV A++ +   +  +AP +  ++AEYF        
Sbjct: 208 IGQKASTIASVVEKLRQAGALEYTIVVAASASDPAPMLYIAPYSGCSMAEYFMYHEGKPT 267

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--------- 303
           L + D +++ A + R+++      P    YP  VF    RLLER     ++         
Sbjct: 268 LCVYDDLSKQAAAYRQLSLVLRRPPGREAYPGDVFYLHSRLLERAAKLREDDGVVDGKTI 327

Query: 304 ---KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SVSR+
Sbjct: 328 FKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAGIRPAVNVGISVSRV 387

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   K +   L   + +F E         +   +D    + + +     + LKQ 
Sbjct: 388 GGSAQTKAMKGVAGRLRLDLAQFRELE---AFAAFASDLDAATKRQLDRGARTVEILKQG 444

Query: 421 PSDLSSED 428
                  +
Sbjct: 445 QYSPLPFE 452


>gi|169303164|gb|ACA53179.1| ATP synthase alpha subunit [Callithamnion baileyi]
          Length = 404

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L +    G+ +     +   +G  + +  D V +  +G G 
Sbjct: 7   VANVGTVLQVGDGIARVYGLDE-AMAGELLQFDDPDQ-TIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID    L     +  I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGQEFLGRVVNPLAEPIDAKG-LPASSETRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF  +G   L+I
Sbjct: 184 QKASSVAQIVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYQGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|169303156|gb|ACA53175.1| ATP synthase alpha subunit [Aglaothamnion halliae]
          Length = 404

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L +    G+ +     +   +G  + +  D V +  +G G 
Sbjct: 7   VANVGTVLQVGDGIARVYGLDE-AMAGELLQFDDPDQ-TIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID    L     +  I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGQDFLGRVVNPLAEPIDAKG-LPASSETRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF  +G   L+I
Sbjct: 184 QKASSVAQIVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYQGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|21230027|ref|NP_635944.1| F0F1 ATP synthase subunit alpha [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66769979|ref|YP_244741.1| F0F1 ATP synthase subunit alpha [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188993191|ref|YP_001905201.1| F0F1 ATP synthase subunit alpha [Xanthomonas campestris pv.
           campestris str. B100]
 gi|81304068|sp|Q4UQF2|ATPA_XANC8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81796771|sp|Q8PCZ7|ATPA_XANCP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358203|sp|B0RWC4|ATPA_XANCB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|21111547|gb|AAM39868.1| ATP synthase alpha chain [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575311|gb|AAY50721.1| ATP synthase alpha chain [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734951|emb|CAP53163.1| ATP synthase alpha chain [Xanthomonas campestris pv. campestris]
          Length = 515

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|57868884|gb|AAW57438.1| ATP synthase alpha subunit [Ilex repanda]
          Length = 398

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 167/406 (41%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             VG++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +     +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 398


>gi|58580353|ref|YP_199369.1| F0F1 ATP synthase subunit alpha [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84622323|ref|YP_449695.1| F0F1 ATP synthase subunit alpha [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188578713|ref|YP_001915642.1| F0F1 ATP synthase subunit alpha [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75508330|sp|Q5H4Y6|ATPA_XANOR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007226|sp|Q2P7Q6|ATPA_XANOM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739956|sp|B2SQB2|ATPA_XANOP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|58424947|gb|AAW73984.1| ATP synthase alpha chain [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84366263|dbj|BAE67421.1| ATP synthase alpha chain [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188523165|gb|ACD61110.1| ATP synthase F1, alpha subunit [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 515

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 100/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     ++              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEDYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|255507276|ref|ZP_05382915.1| type III secretion system ATPase [Chlamydia trachomatis D(s)2923]
          Length = 442

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 159/434 (36%), Positives = 242/434 (55%), Gaps = 13/434 (2%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDI 69
           + E     L    G I  +  +   +  +   V +G+  + +       + +V+    + 
Sbjct: 12  MTELPDVQLTAVVGRIIEVVGML--IKAVVPDVRVGEVCLVKRHGMEPLVTEVVGFTQNF 69

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSM 126
           V++ P+G    +S    V   G    I       GRV+N LG PID      L   D   
Sbjct: 70  VFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKGPLENVDAIY 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  ++R ++     TG+R ID    +  GQRIG+FAG+G+GKS+LL M AR+  
Sbjct: 130 PIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAEGQRIGIFAGAGVGKSSLLGMIARNAE 189

Query: 187 -FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREFI  D   + +K+SV+VV+TSD+S  LR  A      IAEY
Sbjct: 190 EADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEY 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LP+LLER G S+K  
Sbjct: 250 FRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGASDK-- 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G ITA  +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+   YP +D LAS+SRL    
Sbjct: 308 GTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAI 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              ++++++     ++ +++    +  IG YR G D  +D A+  +  +  FLKQ   + 
Sbjct: 368 VPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEK 427

Query: 425 SSEDVFQEITKKLQ 438
           ++   ++E  ++L+
Sbjct: 428 TN---YEEAAQQLR 438


>gi|325981188|ref|YP_004293590.1| flagellar protein export ATPase FliI [Nitrosomonas sp. AL212]
 gi|325530707|gb|ADZ25428.1| flagellar protein export ATPase FliI [Nitrosomonas sp. AL212]
          Length = 466

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 156/439 (35%), Positives = 230/439 (52%), Gaps = 25/439 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G ++ +T +      L   V      V      +   +V+  + + +++ P      +S
Sbjct: 27  SGTVTKVTGLVMEAVGLRLAVG-SSCTVFLANGQNVSAEVVGFSGERLFLMPSSDVYGLS 85

Query: 83  LGDLVFHWGRFRISP---------------------SACWCGRVINALGKPIDGDDSLGK 121
            G  VF        P                          GRV+N +G+P+D       
Sbjct: 86  PGARVFPSEVLNEPPRIGNFQHPRRRAADRAKHVIVGPELLGRVLNGVGEPLDRLGP-TH 144

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            + S+ + S+    + R  V +    G+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 145 AEHSVPLYSRPFNPLERTPVSEPLDVGVRAINTLLTVGRGQRMGLFAGSGVGKSVLLGMM 204

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D +++ L+GERGREV+EFIE+ LG + L +SVVV A +D SP+LR      A  
Sbjct: 205 ARYTTADVIVVGLIGERGREVKEFIENILGKEGLARSVVVAAPADTSPLLRLQGAAYATA 264

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF   G +VLLI+DS+TR+A + REI+   GE P  +GYP SVF++LP+L+ER G  
Sbjct: 265 IAEYFRDSGKHVLLIMDSLTRYAMAQREISLAIGEPPATKGYPPSVFAKLPQLVERAGNG 324

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G+ITA  +VL +GD+ NDPI DS R+ILDGHIVL+R LAE G YP +D  AS+SR+
Sbjct: 325 NQAGGSITAFYTVLAEGDDQNDPIVDSARAILDGHIVLSRRLAEAGHYPAIDIEASISRV 384

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                   +  +      L  R++ + D+  +G Y  G D  LD+A+   P    FL Q+
Sbjct: 385 MTSVVPPKQIDMARQFKSLYARYQRSHDLISVGAYVAGTDPELDRAIRLYPSFEKFLHQT 444

Query: 421 PSDLSSE-DVFQEITKKLQ 438
            S   +  D   ++TK  +
Sbjct: 445 MSQYENFADSLVKLTKLFE 463


>gi|157165899|gb|ABV25025.1| ATP synthase alpha subunit [Boehmeria nivea]
 gi|157165903|gb|ABV25027.1| ATP synthase alpha subunit [Boehmeria nivea]
          Length = 457

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 160/381 (41%), Gaps = 19/381 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 6   SGIQGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 66  GIGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 124

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 125 TAIAIDTILNQKQMNSFATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 184

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 185 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 244

Query: 283 PTSVFSELPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 245 PGDVFYLHSRLLERAAKRSDLTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 304

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D
Sbjct: 305 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLD 361

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 +++   + + LKQ  
Sbjct: 362 AATQALLNRGARLTEVLKQPQ 382


>gi|228017062|gb|ACP51884.1| ATP synthase CF1 alpha subunit [Cedrus deodara]
          Length = 507

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQVPVSDAYLGRVVNALAQPIDGXXXXXXSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +  +        ++VV  T+D S  L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSSATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|89112868|gb|ABD61046.1| ATPase alpha subunit [Polygonum sp. Qiu 94110]
          Length = 441

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 173/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 2   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVDFGSDT 57

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 58  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 117 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 176

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 177 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 236

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 237 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A
Sbjct: 297 GSLTALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 356

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 QLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 410


>gi|254796531|ref|YP_003081367.1| ATP synthase F1, alpha subunit [Neorickettsia risticii str.
           Illinois]
 gi|254589768|gb|ACT69130.1| ATP synthase F1, alpha subunit [Neorickettsia risticii str.
           Illinois]
          Length = 509

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 101/439 (23%), Positives = 181/439 (41%), Gaps = 23/439 (5%)

Query: 5   LETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L  + +  ED+ +     + G + S+         L +     + VV        +G + 
Sbjct: 11  LRIIKEKIEDFDQQIFSEEIGEVISVKDGVVIACGL-ENAEFNEKVVFPNGE---IGLIQ 66

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  D V I  +   ++I  GD V       RI       GRVI+ LG P+DG   +   
Sbjct: 67  SIEYDHVGIVILTNTQDIREGDTVRRTKEPLRIPVGKKLLGRVIDPLGNPLDGAGQIF-A 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  K P  ++RQ V++  +TGI+VID+  P+  GQR  +      GK+T+     
Sbjct: 126 DAYSPIEVKAPGILDRQPVKEPLQTGIKVIDLLIPIGRGQRELIIGDRQTGKTTIALDSI 185

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            +          +     +   +G++   V   ++          + +V+A + +S   +
Sbjct: 186 INQRDINKNLPDEEKLYCVYVAIGQKCSTVARIMKTLQEQGAMEYTTIVLAGASDSAQSQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    +I EYF   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 246 FLAPYAGCSIGEYFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHS 305

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   L  +G  P
Sbjct: 306 RLLERAAKMSDKHGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELFNKGVKP 365

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     K++  S+   + ++ E         +   +D      + +
Sbjct: 366 AVNVGLSVSRVGSAAQIKAIKQVARSIKLELAQYREME---AFAQFGADLDETTQALLEK 422

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ+  +    +
Sbjct: 423 GKKLTELLKQNQHETLPVE 441


>gi|39546125|gb|AAR28046.1| ATP synthase alpha subunit [Joinvillea plicata]
          Length = 411

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|83717873|ref|YP_438941.1| type III secretion system ATPase [Burkholderia thailandensis E264]
 gi|257142044|ref|ZP_05590306.1| type III secretion system ATPase [Burkholderia thailandensis E264]
 gi|83651698|gb|ABC35762.1| type III secretion cytoplasmic ATPase SctN [Burkholderia
           thailandensis E264]
          Length = 442

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 165/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +  +  
Sbjct: 2   NALTDLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRSASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E  +G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--RGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|89112830|gb|ABD61027.1| ATPase alpha subunit [Hamamelis mollis]
          Length = 433

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 3   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 58

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 59  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 118 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 177

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 178 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 237

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 238 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A
Sbjct: 298 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAA 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 358 QLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 411


>gi|330963705|gb|EGH63965.1| type III secretion component [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 442

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 161/441 (36%), Positives = 232/441 (52%), Gaps = 17/441 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLG 60
            +LE   QLA+          G + SI  V    +     V +G+  + +  G   +   
Sbjct: 10  PDLERRLQLAQPRPMR-----GTLRSIRGVLLRASVAG--VRIGELCLLRDPGNGRELSA 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +VI  + D   + P+G  E +S    +   G+   +       GRVI+ +G+ +DG   +
Sbjct: 63  EVIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPI 122

Query: 120 GK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              G     + ++ P   +RQR+ K    G+R ID    L  GQR+G+F   G+GKS+LL
Sbjct: 123 AALGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEPGVGKSSLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           +   R+   D ++I L+GERGREVRE +E         ++V VVATSD     R  A   
Sbjct: 183 ASIVRNSDADVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYV 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A T+AEY   +G NVLL++DS+TRFA + REI    GE P  RGYP S FS LPRLLER 
Sbjct: 243 ATTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERA 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP     G+ITA+ +VL +GD   DP+A+  RSILDGHIVL+  LA+   +P +D L S 
Sbjct: 303 GP--GPSGSITALYTVLTEGDATTDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSR 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL D   + + K+L S L  LI R +E   +  +G Y  G D + D+A+ +   I  FL
Sbjct: 361 SRLMDHVATPEHKRLASRLRELIARRQEIELLIQVGEYAAGSDPLADEAIIRHSAIEAFL 420

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           +Q  ++    D   +    L+
Sbjct: 421 RQPAAE---HDSLTQTLVYLR 438


>gi|261821170|ref|YP_003259276.1| flagellum-specific ATP synthase [Pectobacterium wasabiae WPP163]
 gi|261605183|gb|ACX87669.1| flagellar protein export ATPase FliI [Pectobacterium wasabiae
           WPP163]
          Length = 456

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 157/443 (35%), Positives = 241/443 (54%), Gaps = 17/443 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNL 59
           +L++  +  +D     V + G ++  T +    T L  ++ LG   + + +N     +  
Sbjct: 11  SLDSFEKRIDDTPS--VRRYGRLTRATGLVLEATGL--HMPLGATCLIERQNGSQVEEIE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGR------FRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I+ G  V+   G+       ++       GRV++   KP
Sbjct: 67  SEVVGFNGQKLFLMPLEEVEGITPGARVYARVGQDSSSQGKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E     G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPDTG-YRAPLITPPFNPLQRTPIESVLDVGVRAINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +
Sbjct: 306 ALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR             V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDPMLDKAIRLYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEIT 434
            +  FL+Q   + S+ D   +  
Sbjct: 426 HLEAFLQQGMFEQSNYDESCQAL 448


>gi|57115583|gb|AAW33098.1| F1-ATPase alpha subunit [Goodenia ovata]
          Length = 404

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKALLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG   L   +    +  K P  + R+ V +  ++G++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGPLSDHE-RRRVEVKAPGIIERKSVHEPMQSGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTIINQKQMNSRSASESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFIAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VA 354

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + + LKQ  
Sbjct: 355 AFAQFGSDLDAATQALLNRGARLTEVLKQPQ 385


>gi|163754725|ref|ZP_02161847.1| F0F1 ATP synthase subunit alpha [Kordia algicida OT-1]
 gi|161325666|gb|EDP96993.1| F0F1 ATP synthase subunit alpha [Kordia algicida OT-1]
          Length = 525

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 104/449 (23%), Positives = 174/449 (38%), Gaps = 36/449 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   +   + + G +  +      V  L+     G+ V  +       G V+ +  D
Sbjct: 15  KQLSGFEATASLDEVGTVLQVGDGIARVYGLA-NAQYGELVEFETGME---GIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G  +E+  G  V    R   I       GRV++ LG PIDG   +G     M 
Sbjct: 71  NVGVVLLGPSKEVKEGATVKRTQRIASIKVGEEMVGRVVDTLGNPIDGKGPIGGDLYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIFRQPVNEPLQTGIKSIDAMIPVGRGQRELVIGDRQTGKTTVCLDTILNQKE 190

Query: 188 DK-------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          +V+V A + +   ++  AP    
Sbjct: 191 FYDAGEPVFCIYVAIGQKASTVAAIAKTLEERGALAYTVIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
                                 K  G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 311 VIADDDIAKDMNDLPDSLKSIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLD 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +
Sbjct: 371 GDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           D +    +++     + LKQ+ +D  + +
Sbjct: 428 DAVTLNVINKGKRNVEILKQAQNDPYTVE 456


>gi|51473971|ref|YP_067728.1| F0F1 ATP synthase subunit alpha [Rickettsia typhi str. Wilmington]
 gi|81610751|sp|Q68VU6|ATPA_RICTY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|51460283|gb|AAU04246.1| ATP synthase [Rickettsia typhi str. Wilmington]
          Length = 512

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 184/442 (41%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +  +  L+E      + + G + S+      +  L+  V  G+ V  +   S   G
Sbjct: 12  LQKEIANINCLSE------LEEVGQVISVGDGIAKIYGLA-NVKSGEVVEFK---SGVKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            ++ +  D V    +G   ++  GD V       ++       GR ++ALG PIDG   +
Sbjct: 62  LILNLEHDSVGAVIMGDYSKVKQGDNVKRTKDVLKVLVGKALLGRTVDALGNPIDGKGDI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I  K P  + R  V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 VSKEYR-HIEMKAPGIIERTSVSEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAIAI 180

Query: 180 MFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          ++VV+AT+ E+ 
Sbjct: 181 DTIINQKQAHSLTNESDKIYCIYVAIGQKRSSVAQIVKKLEDAGAMDYTIVVLATASEAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +A ++ EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 SLQFIAPYSACSMGEYFRDNGMHALIIYDDLSKHAVAYRQISLLLRRPPGREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +E   G++TA+  +     + +  I  +V SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKMSEEKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A     K++ +S+   + +F E         +   +D      
Sbjct: 361 IRPAVNVGISVSRVGSAAQIKAMKQVAASVKLELAQFRERE---SFSQFGSDLDSATKAQ 417

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           +     + + LKQ        +
Sbjct: 418 IEHGKRLVEILKQEQYQPCPVE 439


>gi|117923588|ref|YP_864205.1| flagellar protein export ATPase FliI [Magnetococcus sp. MC-1]
 gi|117607344|gb|ABK42799.1| type III secretion system ATPase, FliI/YscN [Magnetococcus sp.
           MC-1]
          Length = 449

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 154/418 (36%), Positives = 239/418 (57%), Gaps = 10/418 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G++  +  +   +      V +G       +N + +  +V+      V + P+G  + I 
Sbjct: 35  GWVKKVVGLL--IEGNGPAVSIGQMCDVVRENGEVVKAEVVGFRDKSVLLMPLGSIKGIF 92

Query: 83  LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  +   GR  ++       GRVI  +G+ +DG  +L   D  + + +     M R+++
Sbjct: 93  PGSRIISQGRAEQVPVGPQLLGRVIGPMGEALDGH-ALPHLDDHVPLHAAPINPMLRRKI 151

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           E+    G+R ++    +  GQR+G+FAG+G+GKSTLL M AR    D  +I+L+GERGRE
Sbjct: 152 EEPLDLGVRAVNSLLTVGRGQRLGIFAGTGVGKSTLLGMMARYTAADINVIALIGERGRE 211

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V EFIED LG + + +S+V+VATSD+ P+LR  A   A  IAE+F ++  +VLL++DSIT
Sbjct: 212 VVEFIEDELGPEGMARSIVIVATSDQPPLLRLRAAYMATAIAEFFRAQQKDVLLLMDSIT 271

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + RE+   +GE P +RGYP S F  LPRLLER G  +  +G+IT++ +VL++GD+ 
Sbjct: 272 RFAMAQREVGLATGEPPTSRGYPPSTFMLLPRLLERGGRDQG-RGSITSIYTVLMEGDDI 330

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPI D+VR ILDGHIVL+R LA    YP +D   S+SRL +       K+    L  ++
Sbjct: 331 QDPIVDAVRGILDGHIVLSRDLAAANHYPAIDVNGSLSRLMEGLSEKAHKRAAGQLREIL 390

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             + +  D+  IG Y  G +  +D+A+  +  I  FLKQS  + S     +E   +L+
Sbjct: 391 ATYVKAEDMINIGAYVAGSNPRIDRAIRFIEPIRTFLKQSVEEPS---TLEESIAQLE 445


>gi|20146560|gb|AAM12434.1| ATP synthase alpha subunit [Cyrilla racemiflora]
          Length = 399

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 169/406 (41%), Gaps = 23/406 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLL+R      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLKRAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            K++  SL   + ++ E   +     +   +D      +++   + 
Sbjct: 356 MKQVCGSLKLELAQYPE---VAAFAQFGSDLDAATQALLNRGARLT 398


>gi|6561682|gb|AAF17026.1|AF197694_1 ATPase alpha subunit [Polyalthia suberosa]
          Length = 422

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  D V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 409


>gi|227873550|ref|ZP_03991793.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227840596|gb|EEJ50983.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 436

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 167/423 (39%), Positives = 250/423 (59%), Gaps = 9/423 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPV 75
           + V   G I +I  +    +   +   +GD  +     +++    +V+    D V +   
Sbjct: 13  DTVENIGKIENIVGMSMEASGTGKS-SIGDICMIYSDETESQVAAEVVGFKGDRVQLMTY 71

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                I+ G  V +  R  R+       GR+I+A G P+DG +   + D    + +    
Sbjct: 72  KTSVGITSGAFVRNTRRRLRVPVGDFLKGRIIDAQGNPMDGGEPFPESDF-YTVNNSYMN 130

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            ++R  + +    GI+ ID    +  GQRIG+FAGSG+GKSTL+ M AR+   D  +I+L
Sbjct: 131 PLDRPPIRERLHFGIKAIDGLNTVGKGQRIGIFAGSGVGKSTLMGMIARNVKTDINVIAL 190

Query: 195 VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGRE+ EF+ +D   + +K++V+VVATSD+  +LR  APL A TIAEYF  +G +VL
Sbjct: 191 VGERGREILEFVEKDMGEEGMKRTVLVVATSDQPAMLRLKAPLVATTIAEYFRDRGMDVL 250

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + REI   +GE P+ARGY  S+++E PRLLER G  +K  G+IT V +V
Sbjct: 251 LMMDSLTRFAMAQREIGLATGEPPIARGYTPSIYAEFPRLLERAGAFKK--GSITGVYTV 308

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+ N+PIAD+VR ILDGHIVL+R+LA E  YP +D   S+SRL  +  S + KK  
Sbjct: 309 LVEGDDTNEPIADTVRGILDGHIVLSRALAAENHYPAIDIGMSISRLMAELVSQEHKKYA 368

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQE 432
           S + + +  +++  D+  IG Y+ G D  LD+AV + P I DFL Q   +  S ED   +
Sbjct: 369 SRMRNTLGLYQKNADLIAIGAYKKGTDPKLDEAVDKYPAINDFLMQGTGEAFSYEDTVMQ 428

Query: 433 ITK 435
           + +
Sbjct: 429 MKE 431


>gi|6561664|gb|AAF17008.1|AF197676_1 ATPase alpha subunit [Canella winterana]
          Length = 418

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/418 (22%), Positives = 170/418 (40%), Gaps = 23/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            K++  S    + ++ E   +     +   +D +     ++   + +  KQ   +  S
Sbjct: 356 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAVTQALPNRGARLTEVPKQPQYEPLS 410


>gi|223667978|gb|ACN11585.1| F1-ATPase alpha subunit [Isotria verticillata]
          Length = 433

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/416 (22%), Positives = 170/416 (40%), Gaps = 23/416 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           ++ G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    
Sbjct: 1   IEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTA 56

Query: 81  ISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ
Sbjct: 57  IQEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQ 115

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------- 188
            V +  +TG++ +D   P+  GQR  +      GK+ +      +               
Sbjct: 116 SVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETL 175

Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF  
Sbjct: 176 YCVYVAIGQKRSTVAQLVQILPEANAFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRD 235

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KG 305
            G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G
Sbjct: 236 NGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAG 295

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           + TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A 
Sbjct: 296 SSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQ 355

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 LRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 408


>gi|6561617|gb|AAF16961.1|AF197629_1 ATPase alpha subunit [Peperomia obtusifolia]
          Length = 418

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  D V I  +G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVGIVILGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTNESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 408


>gi|223932790|ref|ZP_03624787.1| ATP synthase F1, alpha subunit [Streptococcus suis 89/1591]
 gi|302023928|ref|ZP_07249139.1| F0F1 ATP synthase subunit alpha [Streptococcus suis 05HAS68]
 gi|330832979|ref|YP_004401804.1| ATP synthase alpha chain [Streptococcus suis ST3]
 gi|223898499|gb|EEF64863.1| ATP synthase F1, alpha subunit [Streptococcus suis 89/1591]
 gi|329307202|gb|AEB81618.1| ATP synthase alpha chain [Streptococcus suis ST3]
          Length = 500

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 180/428 (42%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    L Q  E +  +    + G ++ I         L   +  G+ +V +      +G
Sbjct: 5   QEISALLKQQIEGFQPDFDYTETGVVTYIGDGIARAQGLDNAMS-GELLVFENG---TIG 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G   +I  G +V   G+   +   +   GRVIN LG+P+DG   +
Sbjct: 61  MAQNLETNDVGIIILGQFTDIREGSVVRRTGKIMEVPVGSALIGRVINPLGQPVDGLGEI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  I    P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 121 -RTSKTRPIEYPAPGVMQRKSVNEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 179

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 180 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 240 AGVAMAEEFMYEGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 299

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 300 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLKDDLFNSGIRPAIDAG 359

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 360 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 416

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 417 EVLKQPLH 424


>gi|313576669|gb|ADR66842.1| ATPase subunit 1 [Ternstroemia japonica]
 gi|313576673|gb|ADR66844.1| ATPase subunit 1 [Ternstroemia longipes]
 gi|313576689|gb|ADR66852.1| ATPase subunit 1 [Ternstroemia sp. WH-2010]
 gi|313576691|gb|ADR66853.1| ATPase subunit 1 [Ternstroemia sp. WH-2010]
 gi|313576699|gb|ADR66857.1| ATPase subunit 1 [Ternstroemia sp. WH-2010]
 gi|313576701|gb|ADR66858.1| ATPase subunit 1 [Ternstroemia sp. WH-2010]
          Length = 399

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 168/406 (41%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 398


>gi|20146556|gb|AAM12432.1| ATP synthase alpha subunit [Clethra barbinervis]
          Length = 399

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++     + V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNEIQAE-EMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERADKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  SL   + ++ E   +     +   +D      +++   + +
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSNLDAATQALLNRGARLTE 399


>gi|325921267|ref|ZP_08183127.1| proton translocating ATP synthase, F1 alpha subunit [Xanthomonas
           gardneri ATCC 19865]
 gi|325548234|gb|EGD19228.1| proton translocating ATP synthase, F1 alpha subunit [Xanthomonas
           gardneri ATCC 19865]
          Length = 515

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIETVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|57868886|gb|AAW57439.1| ATP synthase alpha subunit [Pelliciera rhizophorae]
          Length = 405

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 31/413 (7%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDK---------- 189
            +TG++ +D   P+  GQR  +      GK      T+L+    +               
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSPNQHKHNVAAREES 175

Query: 190 ----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EY
Sbjct: 176 DRLYCVYVAIGQKRSTVAQLVQIISEANALEYSILVAATASDPAPLQFLAPYSGCAMGEY 235

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           F   G + L+I D +++ A + R+++      P    +P  VF    RLLER      + 
Sbjct: 236 FRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQT 295

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+  
Sbjct: 296 GAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGS 355

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            A     K++  SL   + ++ E   +     +   +D      +++   + +
Sbjct: 356 AAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 405


>gi|169303186|gb|ACA53190.1| ATP synthase alpha subunit [Pterothamnion yezoense]
          Length = 404

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 99/404 (24%), Positives = 170/404 (42%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L + V  G+ +  +      +G  + +  D V +  +G G 
Sbjct: 7   VANVGSVLQVGDGIARVYGLDE-VMAGELLQFE-DEEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I   + + GRV++ L KPID    +     +  I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGSEFLGRVVSPLAKPIDDKG-IPAVSETRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+T+      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDSMIPIGRGQRELIIGDRQTGKTTVALDTIINQKGQDVVCVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +         + ++VV A +D+   L+ +AP T   +AEYF  KG   L+I
Sbjct: 184 QKASSVAQIVSTLEEKGALEYTIVVAANADDPATLQYIAPYTGAALAEYFMYKGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER     ++   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNQDLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNAGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|1196321|gb|AAB51413.1| flagellar export apparatus [Borrelia burgdorferi]
          Length = 436

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 158/440 (35%), Positives = 248/440 (56%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     V   G +  I  +   V  L     +GD  +   +N   + 
Sbjct: 1   MSNFFENYLRQVDDIET--VSFVGRVQKIKGLL--VESLGPQCAIGDLCLIDQRNGKKVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    I  K+ P +NR   E    TG++V+D F P+  GQR+G+F+GSG+GKSTLL
Sbjct: 117 FLNNSYKELIFEKINP-INRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V    DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFREQGKDVAFCFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  S +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I +F+
Sbjct: 355 SRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  ++    +  ++  K++
Sbjct: 415 SQGINETFDFENLEDEIKEI 434


>gi|44964389|gb|AAS49522.1| mitochondrial ATP synthase H+ transporting F1 complex alpha subunit
           isoform 1 [Latimeria chalumnae]
          Length = 394

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 93/400 (23%), Positives = 174/400 (43%), Gaps = 22/400 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR- 94
           V  L + V   + V     +S   G  + +  D V +   G  + I  GD+V   G    
Sbjct: 1   VYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVD 56

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +       GRV++ALG  IDG   +    +   +  K P  + R  V +  +TG++ +D 
Sbjct: 57  VPVGEELLGRVVDALGNAIDGKGPI-PAKIRRRVGLKAPGIIPRISVREPMQTGVKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGERGREVRE 204
             P+  GQR  +      GK      T+++    ++  D       +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTSLAVDTIINQKRFNEGTDEKKKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF     + L+I D +++ A
Sbjct: 176 LVKRLTNADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNSKHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    YP  VF    RLLER          G++TA+  +     + +
Sbjct: 236 VAYRQMSLLPRRPPGREAYPGDVFYLHSRLLERAAKMNDNFGGGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L  +G  P ++   SVSR+   A +   K++  ++   + 
Sbjct: 296 AYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELA 355

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +F E   +     +   +D    + +++   + + LKQ  
Sbjct: 356 QFRE---VAAFAQFDSDLDASTQQLLNRGVRLTELLKQGQ 392


>gi|146318828|ref|YP_001198540.1| F0F1 ATP synthase subunit alpha [Streptococcus suis 05ZYH33]
 gi|146321037|ref|YP_001200748.1| F0F1 ATP synthase subunit alpha [Streptococcus suis 98HAH33]
 gi|253751914|ref|YP_003025055.1| ATP synthase alpha chain [Streptococcus suis SC84]
 gi|253753737|ref|YP_003026878.1| ATP synthase alpha chain [Streptococcus suis P1/7]
 gi|253755385|ref|YP_003028525.1| ATP synthase alpha chain [Streptococcus suis BM407]
 gi|190358200|sp|A4W1V9|ATPA_STRS2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358201|sp|A4VVK1|ATPA_STRSY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145689634|gb|ABP90140.1| F0F1-type ATP synthase, alpha subunit [Streptococcus suis 05ZYH33]
 gi|145691843|gb|ABP92348.1| F0F1-type ATP synthase, alpha subunit [Streptococcus suis 98HAH33]
 gi|251816203|emb|CAZ51830.1| ATP synthase alpha chain [Streptococcus suis SC84]
 gi|251817849|emb|CAZ55602.1| ATP synthase alpha chain [Streptococcus suis BM407]
 gi|251819983|emb|CAR46129.1| ATP synthase alpha chain [Streptococcus suis P1/7]
 gi|292558489|gb|ADE31490.1| ATP synthase F1, alpha subunit [Streptococcus suis GZ1]
 gi|319758275|gb|ADV70217.1| F0F1 ATP synthase subunit alpha [Streptococcus suis JS14]
          Length = 500

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 180/428 (42%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    L Q  E +  +    + G ++ I         L   +  G+ +V +      +G
Sbjct: 5   QEISALLKQQIEGFQPDFDYTETGVVTYIGDGIARAQGLDNAMS-GELLVFENG---TIG 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +  + V I  +G   +I  G +V   G+   +   +   GRVIN LG+P+DG   +
Sbjct: 61  MAQNLETNDVGIIILGQFTDIREGSVVRRTGKIMEVPVGSALIGRVINPLGQPVDGLGEI 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  I    P  M R+ V +  +TG++ ID   P+  GQR  +      GK+++  
Sbjct: 121 -RTSKTRPIEYPAPGVMQRKSVNEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI 179

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 180 DAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 239

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 240 AGVAMAEEFMYEGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 299

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 300 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLKDDLFNSGIRPAIDAG 359

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 360 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTQFGSDLDAATQAKLNRGRRTV 416

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 417 EVLKQPLH 424


>gi|332976827|gb|EGK13653.1| ATP synthase F1 sector alpha subunit [Psychrobacter sp. 1501(2011)]
          Length = 514

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++QL +   ++L         G I  ++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISQLIKQRIQDLDTGATAKNEGTIVKVSDGIVQIHGL-EDAMYGEMIEFEG--- 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           D  G  + +  D V    +G    +  G   +  GR   +       GRV++ALG PIDG
Sbjct: 59  DVYGMALNLEQDSVGAVVLGDYLGLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+ ++    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++ A+     K +   +G++   +   +           + VVVA++ E   L+ 
Sbjct: 178 ALAIDAIIAQKTSGIKCVYVAIGQKRSTIANVVRKLEESGALAYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNAAYVEEFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SSLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +     + + +KQ  
Sbjct: 415 DDATKQQLDHGERVTELMKQKQ 436


>gi|283768659|ref|ZP_06341571.1| ATP synthase F1, alpha subunit [Bulleidia extructa W1219]
 gi|283105051|gb|EFC06423.1| ATP synthase F1, alpha subunit [Bulleidia extructa W1219]
          Length = 508

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 179/428 (41%), Gaps = 15/428 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   +     GY+ S+      V  +SQ +   + +         +G V  
Sbjct: 11  SLIKQEIEQYGNKVESNDVGYVISVGDGIAMVQGMSQAMS-SELLDF---GHGVMGMVQN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD V   G+   +       GRV+NALG+ IDG D + K +
Sbjct: 67  LEEDHVGAVLLGNDRAIKEGDEVRRTGKIVEVPVGDVLLGRVVNALGQAIDGGDPI-KVE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            +  +    P  M R+ V +   TG++VID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 KTRPVERVAPGVMTRKSVSQPLMTGLKVIDSMIPIGKGQRELIIGDRETGKTAIALDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   V   ++     D LK + VV   +  S  L+ +AP     
Sbjct: 186 NQKGKNVYCIYVAIGQKESTVARLVQKLRENDALKYTTVVNEGASASAPLQYLAPYAGCA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E +  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER    
Sbjct: 246 MGEEWMEQGKDVLIIYDDLSKHAVAYRTMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+  +     + +  I  +V SI DG I L   L   G  P VD   SVS
Sbjct: 306 SDELGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLQADLFAAGVRPAVDSGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K + SSL   + ++ E   +     +   +D    K ++    + + LK
Sbjct: 366 RVGSAAQTKAMKMVSSSLKLELAQYNE---MLSFSQFGSDLDDSTKKIINHGAHLTELLK 422

Query: 419 QSPSDLSS 426
           Q      S
Sbjct: 423 QGQYKPYS 430


>gi|238916749|ref|YP_002930266.1| Na+-transporting two-sector ATPase [Eubacterium eligens ATCC 27750]
 gi|238872109|gb|ACR71819.1| Na+-transporting two-sector ATPase [Eubacterium eligens ATCC 27750]
          Length = 449

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 239/417 (57%), Gaps = 10/417 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYIC 73
            K+   + G ++ I     T+  +     L D       ++  +   +V+  N   V + 
Sbjct: 14  EKSFYKKLGKVTKIVG--LTIESVGPDAKLNDLCRIYSADNSQELYAEVVGFNDSSVLLM 71

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P  + + I  G +V +  +   +       G  ++ LG P DG +     +    + +  
Sbjct: 72  PFDVVDGIGPGCVVENMEKPLTVKVGDGILGHTLDGLGNPTDGSELELTDE--YPVEAAP 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  M+R+ + +    G++ +D    +  GQRIG+FAGSG+GKSTLL MFAR+   D  +I
Sbjct: 130 PDPMDREIISQVLPLGVKAVDGLLTVGKGQRIGIFAGSGVGKSTLLGMFARNTKADINVI 189

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREVREF+  D   + + +SV+VVATSD+  ++R  A  TA  IAEYF  +G +
Sbjct: 190 ALIGERGREVREFVERDLGPEGMARSVLVVATSDKPALIRNKAAKTATAIAEYFRDQGKD 249

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL++DS+TRF+ + REI   SGE PV RGYP SV+SE+P+LLER G S+K  G+IT + 
Sbjct: 250 VLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGMSDK--GSITGLY 307

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLVDGD+ N+PI D+ RSILDGHIVL+R L ++  YP +D L S+SR   +      K+
Sbjct: 308 TVLVDGDDFNEPITDTARSILDGHIVLSRKLGQKNHYPAIDVLQSISRCMSQIVDRQHKQ 367

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           +   + +++  + E  D+  IG Y+ G +  +D A++++  +  FL Q   +    D
Sbjct: 368 MAGRMKNVMATYNEAEDLINIGAYKSGSNKNIDYAIYKIDTVNKFLMQQTDEKFDYD 424


>gi|57868900|gb|AAW57446.1| ATP synthase alpha subunit [Couroupita guianensis]
          Length = 399

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 168/406 (41%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 2   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 57

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 58  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 116

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 117 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVY 176

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 177 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 236

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 237 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 296

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 297 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAM 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 357 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|256820539|ref|YP_003141818.1| F0F1 ATP synthase subunit alpha [Capnocytophaga ochracea DSM 7271]
 gi|256582122|gb|ACU93257.1| ATP synthase F1, alpha subunit [Capnocytophaga ochracea DSM 7271]
          Length = 526

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 105/449 (23%), Positives = 168/449 (37%), Gaps = 36/449 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   +   + + G +  +      +  LS     G+ V          G V+ +  D
Sbjct: 15  EQLAHFDANASLEEVGTVLQVGDGIARIFGLS-NAQYGELVKFDNG---LQGIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G   +I  GD V   G    I+      GRV+N LG+PIDG   +      M 
Sbjct: 71  NVGITLLGPSTDIKEGDTVKRTGLIASINVGEGIVGRVVNTLGQPIDGKGPITGKLYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIFRQPVNEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          + +V A + +   ++  AP    
Sbjct: 191 FYDAGKPVYCIYVAIGQKASTVAGITKTLEDAGALAYTTIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VINDDTIARQMNDLPESIAPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +
Sbjct: 371 SDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQYRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           D      + +     + LKQ  +D    +
Sbjct: 428 DAATMGVIEKGKRNVEILKQPQNDPYPVE 456


>gi|34539303|gb|AAQ74535.1| F1-ATPase alpha subunit [Geitonoplesium cymosum]
          Length = 418

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|254785461|ref|YP_003072890.1| flagellum-specific ATP synthase [Teredinibacter turnerae T7901]
 gi|237687407|gb|ACR14671.1| flagellar protein export ATPase FliI [Teredinibacter turnerae
           T7901]
          Length = 480

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 151/407 (37%), Positives = 231/407 (56%), Gaps = 6/407 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++ +  +      L+  V +G    V      +   +V+  + D  ++ PV   + + 
Sbjct: 29  GRLTRMVGLTLEAVGLN--VSVGRQCKVVLSSGREVEAEVVGFDEDKTFLMPVQKVDGLQ 86

Query: 83  LGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V      + +S      GR++N +G+P+DG   +      +++       ++R  +
Sbjct: 87  PGARVVPVDAHKNLSMGEHLRGRILNGVGQPLDGLGPVS-CRAKVDLEPSTINPLHRHPI 145

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++    GIR I+    +  GQRIG+FAGSG+GKS LL M  R    D V++ L+GERGRE
Sbjct: 146 DETLDVGIRAINSLLTVGKGQRIGLFAGSGVGKSVLLGMMTRFTTADVVVVGLIGERGRE 205

Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V+EF++  LG   LKKSVVV A +D++P++R  A   A  IAEYF  +G NVLL++DS+T
Sbjct: 206 VKEFVDHILGPQGLKKSVVVAAPADDAPLMRLRASQLATRIAEYFRDQGKNVLLLMDSLT 265

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI+   GE P  +GYP SVF+++P L+ER G  +K  G+ITA  +VL +GD+ 
Sbjct: 266 RFAQAQREISLAIGEPPATKGYPPSVFAKIPDLVERAGNGDKGGGSITAFYTVLTEGDDL 325

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPIAD+ R+ILDGHIVL+R LAE+G YP +D  AS+SR+      A+          L+
Sbjct: 326 QDPIADASRAILDGHIVLSRQLAEQGIYPAIDIEASISRVMPNIVDANHLAAAQRFKQLL 385

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
            R+ E +D+  IG Y  G D  +D A+ + P +  F+ Q   + +  
Sbjct: 386 ARYRENKDLIAIGAYARGSDPQIDAAIERFPHLQQFIGQKIGEPAPY 432


>gi|302415164|ref|XP_003005414.1| ATP synthase subunit alpha [Verticillium albo-atrum VaMs.102]
 gi|261356483|gb|EEY18911.1| ATP synthase subunit alpha [Verticillium albo-atrum VaMs.102]
          Length = 534

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 102/412 (24%), Positives = 178/412 (43%), Gaps = 21/412 (5%)

Query: 27  SSITSVYY-TVTCLSQYVCLGD--FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           + ++S+    +  + +   L +   V+  G  S   G  + +    V +   G    +  
Sbjct: 49  TEVSSILEQRIRGVQEESNLAETGRVLSVGFASGVKGMCMNLEAGQVGVVLFGSDRLVKE 108

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G+ V   G    +       GRVI+ALG PIDG   L   +       K P  + RQ V 
Sbjct: 109 GETVKRTGEIVEVPVGPELLGRVIDALGNPIDGKGPLNTSEKRRA-QLKAPGILPRQSVN 167

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVII 192
           +  +TG++ ID   P+  GQR  +      GK       +L+    ++  D       + 
Sbjct: 168 QPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVALDAMLNQKRWNNSNDEEKKLYCVY 227

Query: 193 SLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T   +AE+F   G +
Sbjct: 228 VAVGQKRSTVSQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGAAVAEWFRDNGKH 287

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    YP  VF    RLLER     K+   G++TA
Sbjct: 288 SLVIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKKLGGGSMTA 347

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A     
Sbjct: 348 LPIIETQGGDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQLKAM 407

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           K++  SL   + ++ E   +     +    D    + + +   + + LKQ  
Sbjct: 408 KQVAGSLKLFLAQYRE---VAAFARFGSDSDAATKQTLARGERLTELLKQKQ 456


>gi|130076680|gb|ABO31960.1| ATPase alpha subunit [Cercidiphyllum japonicum]
          Length = 433

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/417 (22%), Positives = 172/417 (41%), Gaps = 23/417 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 3   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 58

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 59  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 118 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESET 177

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 178 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFR 237

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 238 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A
Sbjct: 298 GSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAA 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 358 QLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 411


>gi|297205776|ref|ZP_06923171.1| ATP synthase F1 sector alpha subunit [Lactobacillus jensenii
           JV-V16]
 gi|297148902|gb|EFH29200.1| ATP synthase F1 sector alpha subunit [Lactobacillus jensenii
           JV-V16]
          Length = 507

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 180/430 (41%), Gaps = 15/430 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E +   L + + G I+ +         L+  V   + +  +  +    G    
Sbjct: 13  SLIKKQLEHFDDKLDIDEVGVITYVGDGIARAHGLN-NVLANELLEFENGS---YGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LETNDVGIIILGKYDNIREGDRVKRTGRIMEVPVGEALIGRVVNPLGQPVDGLGEI-KTD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+   + ++ 
Sbjct: 128 KTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTSLAIDTIL 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   +R  +E       +  ++VV A       L  +AP     
Sbjct: 188 NQKGQDVICIYVAIGQKESTIRSQVETLKRFGAMDYTIVVEAGPSAPAPLLYIAPYAGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLIRRPPGREAYPGDVFYIHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 308 SDKLGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTRPAIDAGASVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  F E       G     +D      +++   I + LK
Sbjct: 368 RVGGSAQIKAMKKVAGTLRVDLASFRELESFAQFG---SDLDQATQAKLNRGRRIVEVLK 424

Query: 419 QSPSDLSSED 428
           Q   +    +
Sbjct: 425 QPLHEPLPVE 434


>gi|12659385|gb|AAG60227.1| ATPase alpha subunit [Arisaema triphyllum]
          Length = 409

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 95/403 (23%), Positives = 170/403 (42%), Gaps = 19/403 (4%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD--KVIISLVGERGRE 201
           ++ +D   P+  GQR  +      GK      T+L+    +   +    +   +G++   
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSSSETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +     +   +D +    +++   + +  KQ  
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQ 395


>gi|306835880|ref|ZP_07468875.1| ATP synthase F1 sector alpha subunit [Corynebacterium accolens ATCC
           49726]
 gi|304568245|gb|EFM43815.1| ATP synthase F1 sector alpha subunit [Corynebacterium accolens ATCC
           49726]
          Length = 557

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 188/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ + + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 76  VAQNLDTNSIGVVVLGNYESLKEGDEVKRTGEVLSIPVGEDFLGRVINPLGQPIDGLGPI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 136 ESEEERV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVTI 194

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +               + +V A + +S 
Sbjct: 195 DTILNQKANWESGDKDKQVRCIYVAIGQKGSTIASVRRTLEEHGALDYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + + +  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GYKWLAPFSGAALGQQWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLAAY---RDLQAFAAFASDLDAASKAQ 431

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQS S     +
Sbjct: 432 LERGSRLVELLKQSESSPQPVE 453


>gi|164685604|gb|ABY66748.1| atp1 [Helianthemum sp. TJB-2007]
          Length = 413

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 93/410 (22%), Positives = 167/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           SL   + ++ E   +     +   +D      +++   + + LKQ     
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYQP 402


>gi|291536005|emb|CBL09117.1| type III secretion system ATPase, FliI/YscN [Roseburia intestinalis
           M50/1]
          Length = 435

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 156/436 (35%), Positives = 249/436 (57%), Gaps = 11/436 (2%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQVI 63
           T  +  +   K    + G ++ I     T+  +     L D       + +N   + +V+
Sbjct: 3   TFDKYLQLADKTYFNRLGKVTKIVG--LTIESVGPNAKLNDLCRIIIDREQNISTMAEVV 60

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                 + + P    E I +G +V + G    +       G  ++ +G+P D ++     
Sbjct: 61  GFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTLDGIGRPTDVEE--LSL 118

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                + +  P  M R+ +++    G++ +D    +  GQRIG+FAGSG+GKSTLL MFA
Sbjct: 119 SYDYPVEALPPDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGIFAGSGVGKSTLLGMFA 178

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D  +I+L+GERGREVREF+  D   + +K+SVV+VATSD+  ++R  A  TA  I
Sbjct: 179 RNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSDKPALIRNKAAKTATAI 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TRF+ + REI   SGE PV RGYP SV+SE+P+LLER G S+
Sbjct: 239 AEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGTSD 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++  YP +D L S+SR+ 
Sbjct: 299 K--GSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQKNHYPAIDVLQSISRVM 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +++ K+L   L +++  + E  D+  IG Y+ G +  +D A+ +   + +FL Q  
Sbjct: 357 SSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDYAIQKNQAVNEFLMQKT 416

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   ++ +KL
Sbjct: 417 DEKFEFNEEIDLLRKL 432


>gi|302342350|ref|YP_003806879.1| flagellar protein export ATPase FliI [Desulfarculus baarsii DSM
           2075]
 gi|301638963|gb|ADK84285.1| flagellar protein export ATPase FliI [Desulfarculus baarsii DSM
           2075]
          Length = 438

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 159/401 (39%), Positives = 226/401 (56%), Gaps = 6/401 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S +  +   V  L   V  G  V         LG+V+      V I P      +  
Sbjct: 23  GRVSQVVGLVAEVRGLELPV--GASVFLHLDEGPVLGEVVGFKGQGVQIMPYADTRGLRP 80

Query: 84  GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G LV    G   +       GRV++ LG P+DG   + + D    +  + P AM R R+ 
Sbjct: 81  GCLVSSAGGAGLVKVGQALLGRVLDGLGNPVDG-GPMPEWDQLYPLYRQAPSAMGRPRIS 139

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G++VI+    L  GQRIG+FAGSG+GKSTL+SM AR    D  +I LVGERGRE+
Sbjct: 140 QPVDVGVKVINALLTLGKGQRIGIFAGSGVGKSTLMSMIARHTQADISVIGLVGERGREL 199

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI  D   + L +SVV+VATSD+  ++R  A   A  +AEYF  +  +V+L++DS+TR
Sbjct: 200 REFIERDLGPEGLARSVVIVATSDQPALVRMRAAYLATAVAEYFRDQSRDVILMMDSVTR 259

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+  + GE P  +GY  SVF++LPRLLER G SE   G+IT + +VLV+GD+  
Sbjct: 260 FAMAGREVGLSIGEPPTTKGYTPSVFAQLPRLLERAGTSEG-GGSITGIYTVLVEGDDVT 318

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD++RSILDGH VL R+LA+ G YP ++ L S+SRLA      +       LT L+ 
Sbjct: 319 EPVADAMRSILDGHFVLTRALADRGHYPAIELLGSISRLARDINPPEVTTAARRLTELLA 378

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            +    D+  IG Y  G + ++D+A+  +  I  FL Q   
Sbjct: 379 AYRRNEDLINIGAYADGSNPVIDRAIRMMERINKFLTQPVE 419


>gi|57868904|gb|AAW57448.1| ATP synthase alpha subunit [Ternstroemia stahlii]
          Length = 396

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/403 (23%), Positives = 168/403 (41%), Gaps = 23/403 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             SL   + ++ E   +     +   +D      +++   + +
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 396


>gi|323449102|gb|EGB04993.1| hypothetical protein AURANDRAFT_59430 [Aureococcus anophagefferens]
          Length = 498

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 98/407 (24%), Positives = 169/407 (41%), Gaps = 17/407 (4%)

Query: 27  SSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDL 86
             +      V  L+  V  G+ V          G  + +    V +   G   EI  GD 
Sbjct: 24  RRVGDGIARVYGLN-SVQAGEMVEFACG---LRGMALNLEESSVGVVIFGDDREILEGDA 79

Query: 87  VFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G    +       GRV++ LG+PIDG   L K  +      K P  + RQ V +  
Sbjct: 80  VKRTGAIVDVPVGKGLLGRVVDGLGEPIDGAGPL-KDVVRGRAEVKAPGIIPRQSVSEPV 138

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDKVIISLVGERGR 200
           +TG++ +D   P+  GQR  +      GK      T+++   + D     I   VG++  
Sbjct: 139 QTGLKAVDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQKTKGDDALMCIYVGVGQKRS 198

Query: 201 EVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            + + +            +VV AT+ ES  L+ +AP T  ++ EYF   G + ++  D +
Sbjct: 199 TIAQLVGQLEMAEAMGNCIVVAATASESAPLQFLAPYTGCSMGEYFRDNGMHAVIFYDDL 258

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDG 317
           ++ A + R+++      P    YP  VF    RLLER     K  G  ++TA+  +    
Sbjct: 259 SKQAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKMGKAAGLGSLTALPVIETQA 318

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L  +G+ P +    SVSR+   A     K++  ++ 
Sbjct: 319 GDVSAYIPTNVISITDGQIFLENELFYQGQRPAISVGLSVSRVGSAAQVKAMKQVAGTMK 378

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             + ++ E   +     +   +D    + +++   +Y+ LKQ     
Sbjct: 379 LDLAQYRE---VAAFAKFGSDLDPATQQQLNRGVRLYELLKQGQYQP 422


>gi|322513165|ref|ZP_08066296.1| ATP synthase F1 sector alpha subunit [Actinobacillus ureae ATCC
           25976]
 gi|322121061|gb|EFX92885.1| ATP synthase F1 sector alpha subunit [Actinobacillus ureae ATCC
           25976]
          Length = 513

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 189/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEAQSTGTIVSVSDGIIRIHGLTD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGSYADLAEGMTVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++ A+ D   K I   +G++   +   +      +    ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIIAQKDSGIKCIYVAIGQKASTIANVVRKLEEHSALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSADYVERFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNSGIRPAVNPGISVSRVGSAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQF 436


>gi|255961300|ref|YP_003097482.1| ATP synthase CF1 alpha chain [Selaginella moellendorffii]
 gi|302824471|ref|XP_002993878.1| hypothetical protein SELMODRAFT_137834 [Selaginella moellendorffii]
 gi|254941472|gb|ACT88987.1| ATP synthase CF1 alpha chain [Selaginella moellendorffii]
 gi|296399249|gb|ADH10424.1| ATP synthase CF1 alpha subunit [Selaginella moellendorffii]
 gi|300138245|gb|EFJ05019.1| hypothetical protein SELMODRAFT_137834 [Selaginella moellendorffii]
          Length = 506

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 103/427 (24%), Positives = 178/427 (41%), Gaps = 14/427 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L Q+ +   +  V   G +  +      +  L   V  G+ V  +      +G  + +  
Sbjct: 14  LGQIEQYDQEVKVFNTGTVLQVGDGIARIHGL-DGVMAGELVEFEDG---TVGTALNLES 69

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V    +G G  I  G  V   G+  +I  S  + GRV NA  +PIDG       +  +
Sbjct: 70  DNVGAVLMGDGLTIQEGSSVKATGKIAQIPVSDAYLGRVANAPAQPIDGKGRTAASESRL 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I S  P  ++R+ V +  +TG+   D   P+  GQR  V      GK+ + +    +  
Sbjct: 130 -IESPAPGIISRRSVYEPMQTGLIATDSTIPIGRGQRELVIGDRQTGKTAVATDTTPNQR 188

Query: 187 FDKVIIS--LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAE 243
               I +   +G++   V + +           ++VV  T++    L+ +AP T   +AE
Sbjct: 189 GQNAICAHAAIGQKASSVAQVVNTSEERGAMEYTIVVAETANSPATLQYLAPYTGAALAE 248

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +  + L+I D +++ A + R+++      P    YP  VF    RLLER      +
Sbjct: 249 YFMYRKQHALIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQ 308

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+ 
Sbjct: 309 LGEGSMTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGVRPAINVGISVSRVG 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++   L   + +F E         +   +D      + +   + + LKQS 
Sbjct: 369 SAAQIKAMKQVAGKLKLELAQFAELE---AFAQFASDLDKATRNQLARGQRLRELLKQSQ 425

Query: 422 SDLSSED 428
           S   S +
Sbjct: 426 SAPLSVE 432


>gi|206901220|ref|YP_002251668.1| ATP synthase F1, alpha subunit [Dictyoglomus thermophilum H-6-12]
 gi|226739873|sp|B5YBQ0|ATPA_DICT6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|206740323|gb|ACI19381.1| ATP synthase F1, alpha subunit [Dictyoglomus thermophilum H-6-12]
          Length = 510

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 101/431 (23%), Positives = 199/431 (46%), Gaps = 15/431 (3%)

Query: 5   LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +E + +  ++Y     +   GY+ S+      V+ L+    +G+ V+ +   S   G V+
Sbjct: 10  IEKIQEKIKEYDFSPRISNIGYVKSVGDGVAQVSLLN-AAFVGEIVIFE---SGIQGMVL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +   G  E +  G++V+  G+  ++   + + GRVI+ LG PIDG   +   
Sbjct: 66  SLKEDSVGVILFGRDEYVKEGEVVYSTGKILQVPTGSGFLGRVIDPLGNPIDGGGLIFP- 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
           +  + + ++ P   +R+ V++   TGIR ID   P+ HGQR  +      GK+T+   ++
Sbjct: 125 EAYVPVDNEAPSIFDREPVKEPLYTGIRAIDALIPIGHGQRELILGDRQTGKTTIAIDTI 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
            ++ +     I   + ++   +   ++          ++V+    D+ P LR +AP+   
Sbjct: 185 ISQRNYGTICIYVAIAQKRTNIARIVQTLREYGALSNTIVIATFPDDPPALRYIAPMAGC 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF  +G+ VL++ D +T+ A++ RE+A     +P    YP  +F     LLER   
Sbjct: 245 AMGEYFMRQGERVLIVYDDLTKHANTYREVALLLRRVPGREAYPGDIFYLHSHLLERAAK 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             ++   G +TA+          +  I  ++ SI DG I L+ +L   G  P ++   SV
Sbjct: 305 LSRKLGGGALTALPIAETLAGEISTYIPTNLISITDGQIYLDTALFNAGVRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     +++   L   + ++ E     +   +   +D+   K + +   I + L
Sbjct: 365 SRVGGSAQPKGMRQVAGRLRLDLAQYREY---AMFLEFGTELDMATKKKIERGRRIEELL 421

Query: 418 KQSPSDLSSED 428
           KQ   ++ S +
Sbjct: 422 KQGAHEVQSVE 432


>gi|34539441|gb|AAQ74604.1| F1-ATPase alpha subunit [Sphaeradenia stenosperma]
          Length = 416

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 169/407 (41%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S+++ AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILLAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 SLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|313576675|gb|ADR66845.1| ATPase subunit 1 [Ternstroemia fragrans]
 gi|313576677|gb|ADR66846.1| ATPase subunit 1 [Ternstroemia impressa]
 gi|313576679|gb|ADR66847.1| ATPase subunit 1 [Ternstroemia stahlii]
 gi|313576681|gb|ADR66848.1| ATPase subunit 1 [Ternstroemia stahlii]
 gi|313576683|gb|ADR66849.1| ATPase subunit 1 [Ternstroemia peduncularis]
 gi|313576693|gb|ADR66854.1| ATPase subunit 1 [Ternstroemia sp. WH-2010]
 gi|313576695|gb|ADR66855.1| ATPase subunit 1 [Ternstroemia sp. WH-2010]
 gi|313576697|gb|ADR66856.1| ATPase subunit 1 [Ternstroemia sp. WH-2010]
          Length = 399

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 95/406 (23%), Positives = 168/406 (41%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRGTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           L   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 398


>gi|167768300|ref|ZP_02440353.1| hypothetical protein CLOSS21_02856 [Clostridium sp. SS2/1]
 gi|317497769|ref|ZP_07956082.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709824|gb|EDS20403.1| hypothetical protein CLOSS21_02856 [Clostridium sp. SS2/1]
 gi|316894958|gb|EFV17127.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 499

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 180/423 (42%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L    E+Y +   V + G I  I     TV  + Q    G+ V+ +       G V+
Sbjct: 10  VSVLKDQIENYDQKTEVKEEGRIIQIADGIATVYGMDQ-AMYGELVIFETG---VHGLVL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  + +    +G    +  G  V   G +  I       GRV+NA+G+PIDG   + K 
Sbjct: 66  NVERNCIGCVLLGSDHGLMEGSKVARTGVQADIPVGDAMIGRVVNAIGEPIDGKGEI-KT 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  +    ++R+ V++  +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 125 DERRPIEHEAAGVIDRKSVDQPLQTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAVDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +           S+VV A++ +   L+ +AP    
Sbjct: 185 LNQKGQDVICIYVAIGQKASTVSQIVTTLSKHGAMDYSIVVSASASDLASLQYIAPYAGT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE+F  +G +VL++ D +++ A + R I+      P    YP  VF    RLLER   
Sbjct: 245 AIAEHFMHQGKDVLIVYDDLSKHAVAYRAISLLLDRPPGREAYPGDVFYLHSRLLERSCR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 305 LSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESELFFSGVRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK+  +L   + ++ E     +   +   +D      ++    + + L
Sbjct: 365 SRVGGAAQTKIMKKVAGNLRIDLAQYRELE---VFTQFSSDLDDGTKATLNYGSHLIELL 421

Query: 418 KQS 420
           KQ 
Sbjct: 422 KQP 424


>gi|98986470|gb|ABF60013.1| ATPase alpha subunit [Phoenix dactylifera]
          Length = 451

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 95/422 (22%), Positives = 171/422 (40%), Gaps = 23/422 (5%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           Y+   V + G + S+      V  L++ +  G+ V      S   G  + +  + V I  
Sbjct: 6   YTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVV 61

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
            G    I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P
Sbjct: 62  FGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----- 188
             + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +         
Sbjct: 121 GIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGT 180

Query: 189 ------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
                   +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   +
Sbjct: 181 SESETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAM 240

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER     
Sbjct: 241 GEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRS 300

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR
Sbjct: 301 DQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSR 360

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  S    + ++ E   +     +   +D       ++   + +  KQ
Sbjct: 361 VGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQ 417

Query: 420 SP 421
             
Sbjct: 418 PQ 419


>gi|57868906|gb|AAW57449.1| ATP synthase alpha subunit [Roridula gorgonias]
          Length = 398

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 168/406 (41%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 398


>gi|164685568|gb|ABY66730.1| atp1 [Iris pseudacorus]
          Length = 413

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|115377823|ref|ZP_01465011.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Stigmatella aurantiaca DW4/3-1]
 gi|310820302|ref|YP_003952660.1| ATPase, flII/yscn family [Stigmatella aurantiaca DW4/3-1]
 gi|115365155|gb|EAU64202.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Stigmatella aurantiaca DW4/3-1]
 gi|309393374|gb|ADO70833.1| ATPase, FliI/YscN family [Stigmatella aurantiaca DW4/3-1]
          Length = 436

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 169/440 (38%), Positives = 237/440 (53%), Gaps = 13/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           M  +L     L +D S  LV   G ++ +T +    +     V +G+ V  + +      
Sbjct: 1   MAIDLSRYYALLKDAS--LVRVRGRVTELTGLVIKASV--PNVRVGEVVYIKSRVRGQVK 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D V + P+G    I     V   G+   I       GRV+   G+PIDG   
Sbjct: 57  AEVVGFQGDEVMLMPLGELYGIGPDSEVIPSGKPLTIKCGEGLLGRVLGGTGEPIDGK-P 115

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L    +   +    P    R R+E     G+R ID    +  GQR+G+FAGSG+GKSTL+
Sbjct: 116 LPDDLIDWSVDRDCPDPFTRMRIEHPLPLGVRCIDGLLTVGEGQRVGLFAGSGVGKSTLM 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLT 237
              AR+   +  +I+L+GERGREVREFIED    + L++SV+V ATSD+  ++R  A   
Sbjct: 176 GQIARNTKAELNVIALIGERGREVREFIEDALGEEGLRRSVLVCATSDQPSLVRLKAAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G NV+ +LD++TR A + REI    GE P  +GYP SVFS LPR+LER 
Sbjct: 236 ATAIAEYFRERGGNVMFMLDTVTRLARAQREIGLAVGEPPARQGYPPSVFSMLPRILERT 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G S K  G  TA+ + LV G +  +PIAD VR ILDGH +LNR+L E  ++P +D LAS+
Sbjct: 296 GNSAK--GKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILNRALGERNQWPAMDVLASL 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+     S D KK    L   +  +E+ RD+ L+G Y+ G D   D A+ +   I D+L
Sbjct: 354 SRVMSGIVSKDHKKAAGKLRETLSTYEKQRDLILLGAYQYGTDPRTDYAIDKYDAIIDYL 413

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           KQ   D  S   F+E    L
Sbjct: 414 KQ---DTHSNSTFEETVNGL 430


>gi|71737205|ref|YP_274726.1| type III secretion component [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71557758|gb|AAZ36969.1| type III secretion component, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 442

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 161/420 (38%), Positives = 227/420 (54%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG       G     + ++ P   +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E         ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP    +G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPPRRGYPPSFFSALPRLLERAGP--GPQGSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   +A+ + L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRHLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+    D   +   +L+
Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSE---HDSLAQTLARLR 438


>gi|254584402|ref|XP_002497769.1| ZYRO0F13068p [Zygosaccharomyces rouxii]
 gi|238940662|emb|CAR28836.1| ZYRO0F13068p [Zygosaccharomyces rouxii]
          Length = 549

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L+      + V     +S   G  + +  + V +   G    +
Sbjct: 68  ETGRVLSIGDGIARVYGLNNLQAE-ELVEF---SSGVKGMALNLEPNQVGVVLFGSDRLV 123

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G+LV   GR   +       GRV++ALG PIDG   +      +    K P  + R+ 
Sbjct: 124 KEGELVKRTGRIVDVPVGPGLLGRVVDALGNPIDGKGPIDSV-GRVLAEVKAPGILPRRS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDC-----FDKV 190
           V +  +TG++ +D   P+  GQR  +      GK       +L+    +           
Sbjct: 183 VHQPVQTGLKAVDGLVPVGRGQRELIIGDRQTGKTAVALDAILNQKKWNSTVPESEKLYC 242

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VG++   V + +++   +   + SV+V AT+ E+  L+ +AP T  +I E+F   G
Sbjct: 243 VYVAVGQKRSTVAQLVQNLEQNGALEYSVIVSATASEAAPLQYLAPFTGASIGEWFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NI 307
            + L+  D +++ A + R+++      P    YP  VF    RLLER     +  G  ++
Sbjct: 303 RHALICYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNENHGAGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +   G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 363 TALPVIETQGGDISAYIPTNVISITDGQIFLEAELFYKGIRPAINVGMSVSRVGSAAQVK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  SL   + ++ E   +     +   +D    + + +   +   LKQ+ 
Sbjct: 423 ALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDPSTKQTLVRGERLTQLLKQAQ 473


>gi|294638353|ref|ZP_06716606.1| ATP synthase F1, alpha subunit [Edwardsiella tarda ATCC 23685]
 gi|291088606|gb|EFE21167.1| ATP synthase F1, alpha subunit [Edwardsiella tarda ATCC 23685]
          Length = 513

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAVDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEIKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|282767712|gb|ADA85892.1| unknown [Allium cepa]
          Length = 435

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 96/426 (22%), Positives = 168/426 (39%), Gaps = 28/426 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
                L  L E    N          G + S+      V  L++ +  G+ V      S 
Sbjct: 5   PRAAELTTLLESRMTNFYTNFQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SG 60

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
             G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG 
Sbjct: 61  VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGR 120

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 121 GALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 179

Query: 177 LLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           +      +                 +   +G++   V + ++     N  + S++V AT+
Sbjct: 180 IAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATA 239

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 240 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 299

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L
Sbjct: 300 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETEL 359

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 360 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAA 416

Query: 403 LDKAVH 408
               +H
Sbjct: 417 TQAQIH 422


>gi|169303178|gb|ACA53186.1| ATP synthase alpha subunit [Callithamnion sp. C762]
          Length = 404

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 94/404 (23%), Positives = 164/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G +  +      V  L + V  G+ +         +G  + +  D V +  +G G 
Sbjct: 7   IANVGTVLQVGDGIARVYGLDE-VMAGELLQFD-DQEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID    +     +  I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGQDFLGRVVNPLAQPIDAKG-IPNSSETRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF   G   L++
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYTGKATLVV 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKTTQNQLARGQRLREIL 404


>gi|237688449|ref|YP_002905068.1| ATP synthase CF1 alpha subunit [Picea sitchensis]
 gi|226875278|gb|ACO89017.1| ATP synthase CF1 alpha subunit [Picea sitchensis]
          Length = 507

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 97/423 (22%), Positives = 172/423 (40%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +    
Sbjct: 67  LESENVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGQISAXX 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 XXXXXXXXX-XXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQKASSVAQVVNTFRERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFXSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSP 421
           QS 
Sbjct: 423 QSQ 425


>gi|76818377|ref|YP_335581.1| type III secretion system ATPase [Burkholderia pseudomallei 1710b]
 gi|134282518|ref|ZP_01769222.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
 gi|167724011|ref|ZP_02407247.1| type III secretion system ATPase [Burkholderia pseudomallei DM98]
 gi|237507405|ref|ZP_04520120.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|254194270|ref|ZP_04900702.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|254262322|ref|ZP_04953187.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
 gi|14719869|gb|AAK73233.1| SctN [Burkholderia pseudomallei]
 gi|76582850|gb|ABA52324.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710b]
 gi|134246075|gb|EBA46165.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 305]
 gi|169651021|gb|EDS83714.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei S13]
 gi|234999610|gb|EEP49034.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei MSHR346]
 gi|254213324|gb|EET02709.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1710a]
          Length = 449

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 240/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 11  EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG+P+DG   
Sbjct: 69  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 129 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 308 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 366 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 425

Query: 418 KQSPSDL-SSEDVFQEI 433
            Q   D  ++ED    +
Sbjct: 426 SQRTDDYAAAEDTIARL 442


>gi|255022048|ref|ZP_05294054.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
 gi|254968534|gb|EET26090.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
          Length = 448

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 173/441 (39%), Positives = 234/441 (53%), Gaps = 12/441 (2%)

Query: 3   KNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           K+L    +  ED S +L     +   G +  +  V      +     +G     +     
Sbjct: 10  KSLTIAQRYLEDLSASLDVMFPLSPSGRVLRVMGVALEAVGV--PAMIGQGARIETPEGW 67

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
            LG+VI  + D   + P G    +  G  V    +   ++      GRVI+A G+P+DG 
Sbjct: 68  RLGEVIGFHGDRAAVMPFGGLRGVFAGASVILADQDSMVAVGDALLGRVIDAQGRPLDGR 127

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L        +    P  ++R R+ K    G+R I+    +  GQRIG+FAGSG+GKS 
Sbjct: 128 PLLAT--QRRPLRQPAPHPLHRARIVKPLDVGVRAINALLTVGEGQRIGLFAGSGVGKSV 185

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           LL M AR    D V+I+L+GERGREVREF+ED LGD L  SV+VVAT+D  PILR     
Sbjct: 186 LLGMMARHTQADVVVIALIGERGREVREFVEDILGDGLSHSVLVVATADAPPILRMRGAE 245

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAE+F  +G  VLLI+DS+TR+A + RE+   +GELP  +GYP SVFS L  L ER
Sbjct: 246 YATAIAEHFRDQGKRVLLIMDSLTRYAMAAREVGLTAGELPATKGYPPSVFSTLSVLTER 305

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G +E   G ITA  SVL +GD+  DP+AD+ RSILDGHIVL+R LA  G  P +DP  S
Sbjct: 306 AGTAEN--GAITAFYSVLTEGDDLQDPVADAARSILDGHIVLSRDLAAAGVLPAIDPAVS 363

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            SR+       +   LV  +      + E  D+  IG YR G D  LD A+ + P I DF
Sbjct: 364 ASRVMRSIVDTEHLALVQRVMSWWGNYREKSDLIAIGAYRQGSDPTLDMAMQKYPAILDF 423

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q P + S         ++L
Sbjct: 424 LRQHPEESSHFSASLSALRQL 444


>gi|164685674|gb|ABY66783.1| atp1 [Ombrophytum subterraneum]
          Length = 413

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L+  +  G+ V     +S   G    +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLN-GIQAGEMVEF---SSGVKGIASNLENENVGIVVFGSDTSIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQSGKTAIAIDTILNQKQMNSRATSDSETLFCVYVAIGQ 175

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + +E    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVEMISEGNALEYSILVAATASDPAPLQFLAPYSGCAVGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     KK+  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKKVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 399


>gi|20146610|gb|AAM12459.1| ATP synthase alpha subunit [Sarracenia flava]
          Length = 399

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLL+R      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLKRAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|325473789|gb|EGC76977.1| flagellum-specific ATP synthase FliI [Treponema denticola F0402]
          Length = 474

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 167/423 (39%), Positives = 239/423 (56%), Gaps = 10/423 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYIC 73
             + +   G +  +               +G+   +    N D L  +V+ +N  IV + 
Sbjct: 14  ETDPIKFTGRVVRVHDKLIESEG--PVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
                + + +GDLV   G    +       GRV++AL K  DG            +++  
Sbjct: 72  SYTDVQGVKIGDLVIASGEILSVPVGNVLLGRVVDALCKSADGKPEPYSAK-RYPVVAPP 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P AM R+ + +   TGIR ID    +  GQR+G+FAG+GIGKSTLL M AR+   D  +I
Sbjct: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV +FI  D   + LK SV+V ATSD+S + R     TA  IAEYF  +G +
Sbjct: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L+ DS+TRFA + REI    GE P  RGY  SVFS LP+LLER G SEK  G+IT   
Sbjct: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V+ L S+SRL+++    + K 
Sbjct: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF 430
               +  L+  + E+ D+  +G Y+ G    +D A+   P IYDFL Q   D +  +D  
Sbjct: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428

Query: 431 QEI 433
           Q++
Sbjct: 429 QKL 431


>gi|325576873|ref|ZP_08147488.1| ATP synthase F1 sector alpha subunit [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325161079|gb|EGC73197.1| ATP synthase F1 sector alpha subunit [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 513

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALENTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTQGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVVKKLAGGIRTALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQ 435


>gi|6561632|gb|AAF16976.1|AF197644_1 ATPase alpha subunit [Sargentodoxa cuneata]
          Length = 418

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 168/411 (40%), Gaps = 23/411 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V          G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFASGAK---GIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMHSRGPSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 403


>gi|53716417|ref|YP_106211.1| type III secretion system ATPase [Burkholderia mallei ATCC 23344]
 gi|52422387|gb|AAU45957.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei
           ATCC 23344]
          Length = 429

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 164/430 (38%), Positives = 235/430 (54%), Gaps = 9/430 (2%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDI 69
           A    +  V   G +  +      V  L     LG+    +G +   +   +V+    ++
Sbjct: 3   ARLAIEPAVGMTGKVLEVIGTLVRVVGLE--ATLGELCELRGASGALIQHAEVVGFTRNV 60

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
             + P G   EI+ G  V    R   +       GRVI++ G+PIDG   L   D    +
Sbjct: 61  ALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGELDY-DALRPV 119

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
           ++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL MFAR    D
Sbjct: 120 IAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLGMFARGASCD 179

Query: 189 KVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  A   A  IAEYF  
Sbjct: 180 VNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAATAIAEYFRD 239

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER G  E   G+I
Sbjct: 240 QGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTGMGE--HGSI 297

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+SR+  +  + 
Sbjct: 298 TALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLSRIMPQVATR 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL Q   + S  
Sbjct: 358 EHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLNQRTDEYSPP 417

Query: 428 DVFQEITKKL 437
           D       +L
Sbjct: 418 DATLAALHEL 427


>gi|289668358|ref|ZP_06489433.1| F0F1 ATP synthase subunit alpha [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 515

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELP---HNT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|119899009|ref|YP_934222.1| ATP synthase [Azoarcus sp. BH72]
 gi|119671422|emb|CAL95335.1| ATP synthase [Azoarcus sp. BH72]
          Length = 468

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 226/427 (52%), Gaps = 24/427 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ I  +      L   +  G  +V  G  +    +V+  N + +Y+ P      ++ 
Sbjct: 29  GRLTRINGLVMEAAGLKLPLGSGCQIVVPGSGA-VEAEVVGFNGEKLYMMPTDDVFGLAP 87

Query: 84  GDLV-------------FHWGRFR--------ISPSACWCGRVINALGKPIDGDDSLGKG 122
           G  V                G  R        +       GRV++  G+P+DG   L   
Sbjct: 88  GAQVLPMENSVPRLVPGKRLGPRRRASDRAKHLPVGDAMLGRVVDGAGRPLDGLGPLNTV 147

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           + +  +  +    +NR  + +    GIR I+    +  GQR+G+FAGSG+GKS L+ M A
Sbjct: 148 E-TRSLQGRPVNPLNRAPIAQPLDVGIRAINSLLTVGRGQRLGLFAGSGVGKSVLIGMMA 206

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D +++ L+GERGREV+EFI  +   +  K+SVVV A +D SP++R      A TI
Sbjct: 207 RFTSADIIVVGLIGERGREVKEFIEHNLGAEGRKRSVVVAAPADNSPLMRLQGAAYATTI 266

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G  VLLI+DS+TR+A + REIA   GE PV RGYP SVF+ LP L+ER G   
Sbjct: 267 AEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPVTRGYPPSVFARLPALVERAGNGP 326

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA  +VL +GD+  DPIADS R+ILDGH VL+R+LA++G YP +D   S+SR  
Sbjct: 327 DGGGSITAFYTVLAEGDDQQDPIADSARAILDGHFVLSRNLADQGHYPAIDIEQSISRAM 386

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     LV     L  R++ +RD+  +G Y+PG + +LD AV   P +  FL+Q  
Sbjct: 387 HTLVDNAHFDLVRRFKQLFSRYQRSRDLIAVGAYQPGAEPLLDMAVALYPRLEAFLQQRV 446

Query: 422 SDLSSED 428
            +    D
Sbjct: 447 DEREPYD 453


>gi|88801715|ref|ZP_01117243.1| ATP synthase subunit A [Polaribacter irgensii 23-P]
 gi|88782373|gb|EAR13550.1| ATP synthase subunit A [Polaribacter irgensii 23-P]
          Length = 525

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 105/454 (23%), Positives = 172/454 (37%), Gaps = 38/454 (8%)

Query: 6   ETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   ++ +K  + + G +  +      V  LS  V  G+ V  +       G V+ 
Sbjct: 11  AILKQQLTNFETKATLNEVGTVLQVGDGIARVYGLS-NVQYGELVEFEDG---LEGIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  G +V    R   +       GRV++ LG PIDG   +    
Sbjct: 67  LEEDNVGVVLLGASTAIREGSIVKRTERIASLKTGEGIVGRVVDTLGNPIDGKGPIEGKT 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  + P  + R+ V +  +TGI+ ID   P+  GQR  +      GKST+      
Sbjct: 127 YEMPLERRAPGVIYREPVTEPLQTGIKSIDAMIPVGRGQRELIIGDRQTGKSTVALDTIL 186

Query: 184 SDCF-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +             I   +G++   V               + +V A + +   ++  AP
Sbjct: 187 NQKEFFDAGQPVYCIYVAIGQKASTVAAIANMLEEKGAMAYTTIVAANASDPAAMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G   L+I D +++ A + REI+      P    YP  VF    RLLE
Sbjct: 247 FAGAAIGEYFRDSGRPALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RAAKVINDDKIAGEMNDLPNSLRGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGNAQIKAMKKVSGTLKLDQAQYRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSED 428
              +D      + +     + LKQ+ +D  S ED
Sbjct: 424 GSDLDAATMSVISKGQRNVEILKQAQNDPFSVED 457


>gi|225022780|ref|ZP_03711972.1| hypothetical protein CORMATOL_02825 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944463|gb|EEG25672.1| hypothetical protein CORMATOL_02825 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 553

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 189/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVLSTADGIAQVSGL-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  ++
Sbjct: 76  VAQNLDTDRVGVVILGNYETLKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLGAI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + R+ V +  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 136 EAEEDRV-LELQAPSVLQRKPVGEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 194

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  V    +        + + +V A + +S 
Sbjct: 195 DTILNQKANWESGDKTKQVRCIYVAIGQKGSTVAAVRKTLEDHGALEYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFAGAALGQHWMYQGYHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDMGGGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFATFASDLDPASKAQ 431

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ+ +   + +
Sbjct: 432 LDRGARLVELLKQAENSPQTVE 453


>gi|224534379|ref|ZP_03674957.1| flagellar protein export ATPase FliI [Borrelia spielmanii A14S]
 gi|224514481|gb|EEF84797.1| flagellar protein export ATPase FliI [Borrelia spielmanii A14S]
          Length = 436

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 160/440 (36%), Positives = 250/440 (56%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH-QGKNSDNL 59
           M    E   +  +D     V   G +  I  +   V  L     +GD  +  Q  N    
Sbjct: 1   MSNFFENYLRQVDDIET--VAFVGRVQKIKGLL--VESLGPQCAIGDLCLIDQRNNKKVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSEELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    I  K+ P +NR   E+   TG++V+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 117 FLNNRYKELIFKKINP-INRSIFEEQILTGVKVLDGFLPVAKGQRVGIFSGAGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEFELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V L+ DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGTGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINILSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  S +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I DF+
Sbjct: 355 SRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLVRTGIYLKGSNKDVDFAISKYPRIIDFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  ++    +  ++  +K+
Sbjct: 415 SQGINETFDFENLEDEIRKI 434


>gi|301155218|emb|CBW14683.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Haemophilus parainfluenzae T3T1]
          Length = 513

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALENTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTQGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGSAQTKVVKKLAGGIRTALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQ 435


>gi|114567890|ref|YP_755044.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|122317243|sp|Q0AUD1|ATPA_SYNWW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|114338825|gb|ABI69673.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 504

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 107/428 (25%), Positives = 171/428 (39%), Gaps = 17/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  E Y   + V   G +  +      V  L Q    G+ +   G      G V+ 
Sbjct: 10  AILKEQIERYQSEVEVSNVGSVIYVGDGIARVYGL-QGAMAGELLEFTGG---TFGMVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  GD+V   GR    P  +   GRV+NALG+PIDG   +    
Sbjct: 66  LEEDNVGAVLLGEYNHIKEGDVVKATGRIMEVPAGSAMLGRVVNALGQPIDGKGPINTTA 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +       + RQ V    +TG++ ID   P+  GQR  +     IGK+ +      
Sbjct: 126 FR-PLEKVAHGVVTRQPVTTPMQTGLKAIDSMVPIGRGQRELIIGDRQIGKTAIALDSII 184

Query: 184 SDCFDK---VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
           +    K    I   VG++   +      +        +++V AT+ E   L  MAP   V
Sbjct: 185 NQREKKDLICIYVAVGQKQASIAGIAAKFEEMGAMDYTIIVAATASEPAPLLYMAPYAGV 244

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +AE F      +VL+I D +++ A + RE++      P    YP  VF    RLLER  
Sbjct: 245 AMAEEFMEAEGKDVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAC 304

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G+ITA+  +     + +  I  +V SI DG I L   +   G+ P V+   S
Sbjct: 305 RLNPDHGGGSITALPIIETQAGDVSAYIPTNVISITDGQIYLEADMFNAGQRPAVNAGLS 364

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+   A +   K +   L   + ++ E   +     +   +D      + +   + + 
Sbjct: 365 VSRVGGSAQTKAMKSVAGQLRLDLAQYRE---LAAFAQFGSDLDKATLARLTRGERVTEI 421

Query: 417 LKQSPSDL 424
           LKQ     
Sbjct: 422 LKQGQYQP 429


>gi|52426403|ref|YP_089540.1| F0F1 ATP synthase subunit alpha [Mannheimia succiniciproducens
           MBEL55E]
 gi|81609344|sp|Q65Q05|ATPA_MANSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|52308455|gb|AAU38955.1| AtpA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 513

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS+ V  G+ +      
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSE-VMQGEMIALPTG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFAMALNLERDSVGAVVMGPYTDLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-KNDGFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   VG++   +   +     +     ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGVKCIYVAVGQKASTIANVVRKLEENGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGVRPAVNPGISVSRVGGAAQTKAVKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQYAPLS 440


>gi|219684590|ref|ZP_03539533.1| flagellar protein export ATPase FliI [Borrelia garinii PBr]
 gi|219671952|gb|EED29006.1| flagellar protein export ATPase FliI [Borrelia garinii PBr]
          Length = 436

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 156/440 (35%), Positives = 253/440 (57%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     +   G +  I  +   V  L     +GD  +   +N+  + 
Sbjct: 1   MSNFFENYLKQVDDIET--ISFVGRVQKIKGLL--VESLGPQCAVGDLCLIDQRNNKRVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             K         K+ P +NR   E+   TG++V+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 117 FLKNRYKELTFEKINP-INRSIFEEQILTGVKVLDGFLPVAKGQRVGIFSGAGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V L+ DSITRFA++ RE++ + GE PV++GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFRDQGKDVALLFDSITRFANAKREMSLSLGEPPVSKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINILSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR  ++  S +++KL+    +L+  ++   D+   G Y  G +  +D A+ + P I DF+
Sbjct: 355 SRSINRIMSLEKQKLIMKARNLLSIYKNYEDLIRTGIYIKGSNKDVDFAISKYPKIIDFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  +++   +  ++  +++
Sbjct: 415 SQGINEIYDFENLEDEIREI 434


>gi|188580014|ref|YP_001923459.1| flagellum-specific ATP synthase [Methylobacterium populi BJ001]
 gi|179343512|gb|ACB78924.1| flagellar protein export ATPase FliI [Methylobacterium populi
           BJ001]
          Length = 452

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 174/414 (42%), Positives = 240/414 (57%), Gaps = 10/414 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDF--VVHQGKNSDNLG----QVIRINLDIVYICPV 75
             G +++I  +   V      + LG    VV +G +         +VI    D     P 
Sbjct: 25  TFGRVTAIRGLLVEVAGPVSAMRLGGRIDVVVEGGHGAATATVPCEVIGFAGDRALAMPF 84

Query: 76  GIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           G  E +  G   LV       I PSA W GR ++ALG+PIDG   L +G     + +  P
Sbjct: 85  GSLEGVRRGCPALVRDEAAGAIRPSAAWLGRTVDALGRPIDGLGPLPQGPAIYPLRADPP 144

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           PA  R+RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I 
Sbjct: 145 PAHGRRRVGPPLDLGVRCINTFLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIG 204

Query: 194 LVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           LVGERGREV+EF++D LG   L +SVVVVATSDE  ++R+ A    + IAEYF  +G  V
Sbjct: 205 LVGERGREVQEFLQDDLGAAGLARSVVVVATSDEPVLMRRNAAYVTLAIAEYFRDQGAQV 264

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L ++DSITRFA + R+I    GE P A+GY  +VFSELPRLLER GP    +G I+ + +
Sbjct: 265 LCMIDSITRFAMAQRDIGLAGGEPPTAKGYTPTVFSELPRLLERAGPGVG-EGAISGLFT 323

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+HN+P+AD+VR ILDGHIV+ R +AE+GRYP ++ L SVSR   +A        
Sbjct: 324 VLVEGDDHNEPVADAVRGILDGHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPT 383

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           V     ++  + +  ++  +G YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 384 VRRARKVLATYADMEELIRLGAYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 437


>gi|66821919|gb|AAY57287.1| ATPase alpha subunit [Takhtajania perrieri]
          Length = 419

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 172/420 (40%), Gaps = 23/420 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V + G + S+      V  L++ +  G+ V      S   G  + +  + V I   G   
Sbjct: 1   VDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDT 56

Query: 80  EISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R
Sbjct: 57  AIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIER 115

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------- 188
           + V +  +TG++ +D   P+  GQR  +      GK+ +      +              
Sbjct: 116 KSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESET 175

Query: 189 -KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF 
Sbjct: 176 LYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQILAPYSGCAMGEYFR 235

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   
Sbjct: 236 DNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGA 295

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A
Sbjct: 296 GSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAA 355

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                K++  S    + ++ E   +   G     +D +    +++   + +  KQ   D 
Sbjct: 356 QLRAMKQVCGSSKLELAQYREVPALAQFG---SDLDAVTQALLNRGARLTEVPKQPQYDP 412


>gi|6561634|gb|AAF16978.1|AF197646_1 ATPase alpha subunit [Cocculus trilobus]
          Length = 421

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|305682112|ref|ZP_07404916.1| ATP synthase F1, alpha subunit [Corynebacterium matruchotii ATCC
           14266]
 gi|305658585|gb|EFM48088.1| ATP synthase F1, alpha subunit [Corynebacterium matruchotii ATCC
           14266]
          Length = 542

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 189/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVLSTADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  ++
Sbjct: 65  VAQNLDTDRVGVVILGNYETLKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLGAI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + R+ V +  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 EAEEDRV-LELQAPSVLQRKPVGEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  V    +        + + +V A + +S 
Sbjct: 184 DTILNQKANWESGDKTKQVRCIYVAIGQKGSTVAAVRKTLEDHGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALGQHWMYQGYHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDDMGGGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFATFASDLDPASKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ+ +   + +
Sbjct: 421 LDRGARLVELLKQAENSPQTVE 442


>gi|6561679|gb|AAF17023.1|AF197691_1 ATPase alpha subunit [Magnolia tripetala]
          Length = 423

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|160880846|ref|YP_001559814.1| flagellar protein export ATPase FliI [Clostridium phytofermentans
           ISDg]
 gi|160429512|gb|ABX43075.1| flagellar protein export ATPase FliI [Clostridium phytofermentans
           ISDg]
          Length = 434

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 163/435 (37%), Positives = 257/435 (59%), Gaps = 13/435 (2%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRI 65
             +  E   K+   + G ++ +     TV  +     + D      ++   +   +VI  
Sbjct: 4   FNKYEELLMKSYANRLGKVTKVVG--LTVESIGPDASVNDLCEIISQDKSIVVKAEVIGF 61

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             D + + P      I +G +V +      +       G+ ++ LG P+D   +L   + 
Sbjct: 62  RDDKLLLMPYDDITGIGVGSMVLNKKEPLLVKVGDELLGQTLDGLGNPMD-MSTLSLSE- 119

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           S  + +K P  M+R+ + +    G+R +D    +  GQRIG+FAGSG+GKSTLL MFAR+
Sbjct: 120 SYPVDAKAPDPMDRELIGEVLSLGVRAVDGLLTIGKGQRIGIFAGSGVGKSTLLGMFARN 179

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+L+GERGREV+EFI  D   + +K+SV+V+ATSD+  ++RK A  TA  IAE
Sbjct: 180 TKADINVIALIGERGREVKEFIERDLGPEGVKRSVLVIATSDKPALIRKKAAKTATAIAE 239

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  KG +VLL++DS+TRF+ + REI   SGE PV+RGYP SV+SE+P+LLER G S+K 
Sbjct: 240 YFRDKGKDVLLMMDSLTRFSMAQREIGLASGEPPVSRGYPPSVYSEMPKLLERAGNSDK- 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT + +VLVDGD+ N+PI D+ R ILDGHIVL+R +A++  YP +D LAS+SR+   
Sbjct: 299 -GSITGLYTVLVDGDDFNEPITDTARGILDGHIVLSRKMAQKNHYPAIDVLASISRVMSA 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             +++ KKL   L  ++  +++  D+  IG Y+PG +  +D ++ ++  + +FL Q   D
Sbjct: 358 IATSEHKKLAGKLKMVLATYQDAEDLINIGAYKPGTNKNIDYSMRKIEQVNEFLCQQVDD 417

Query: 424 LSSEDVFQEITKKLQ 438
            +    F++   KL+
Sbjct: 418 KAD---FEDTIHKLE 429


>gi|259490999|gb|ACW82493.1| ATP synthase subunit 1 [Aldrovanda vesiculosa]
          Length = 425

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  + G  +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGATGWSE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRATSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 406


>gi|330876197|gb|EGH10346.1| type III secretion component [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 442

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 161/441 (36%), Positives = 232/441 (52%), Gaps = 17/441 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLG 60
            +LE   QLA+          G + SI  V    +     V +G+  + +  G   +   
Sbjct: 10  PDLERRLQLAQPRPMR-----GTLRSIRGVLLRASVAG--VRIGELCLLRDPGNGRELSA 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +VI  + D   + P+G  E +S    +   G+   +       GRVI+ +G+ +DG   +
Sbjct: 63  EVIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPI 122

Query: 120 GK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              G     + ++ P   +RQR+ K    G+R ID    L  GQR+G+F   G+GKS+LL
Sbjct: 123 AALGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEPGVGKSSLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           +   R+   D ++I L+GERGREVRE +E         ++V VVATSD     R  A   
Sbjct: 183 ASIVRNSDADVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYV 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A T+AEY   +G NVLL++DS+TRFA + REI    GE P  RGYP S FS LPRLLER 
Sbjct: 243 ATTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERA 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           GP     G+ITA+ +VL +GD   DP+A+  RSILDGHIVL+  LA+   +P +D L S 
Sbjct: 303 GP--GPSGSITALYTVLTEGDATTDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSR 360

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL D   + + K+L S L  LI R +E   +  +G Y  G D + D+A+ +   I  FL
Sbjct: 361 SRLMDHVATPEHKRLASRLRDLIARRQEIELLIQVGEYAAGSDPLADEAIIRHSAIEAFL 420

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           +Q  ++    D   +    L+
Sbjct: 421 RQPAAE---HDSLTQTLVYLR 438


>gi|297570965|ref|YP_003696739.1| ATP synthase F1 subunit alpha [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931312|gb|ADH92120.1| ATP synthase F1, alpha subunit [Arcanobacterium haemolyticum DSM
           20595]
          Length = 541

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 94/435 (21%), Positives = 173/435 (39%), Gaps = 22/435 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +K    + G+++        V  L       + +  +      LG  + +    + +  +
Sbjct: 25  AKASSEEVGHVTLSADGIARVEGL-PGAMANELLKFEDG---TLGLAMNLEEREIGVVVL 80

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    I  G  V   G    +     + GRV++ LG PIDG   +   +    +  + P 
Sbjct: 81  GDFSHIEEGMEVRRTGEVLSVPVGEGYLGRVVDPLGNPIDGLGEIADIETRRALELQAPG 140

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD- 188
            M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+L+  A  +  D 
Sbjct: 141 VMARKSVHEPLQTGIKAIDAMIPIGRGQRQLIIGDRKTGKTALAVDTILNQKANWESGDP 200

Query: 189 ----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAE 243
               + I   +G++G  + E       +   + + +V + + +    + +AP T   I +
Sbjct: 201 QKQVRCIYVAIGQKGSTIAEVRATLERNGALEYTTIVASPASDPAGYKYLAPYTGSAIGQ 260

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           ++   G +VL+I D +++ A + R ++      P    YP  VF    RLLER      E
Sbjct: 261 HWMYSGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDE 320

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++T +  +    ++ +  I  +V SI DG I L   L    + P VD   SVSR+ 
Sbjct: 321 LGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVG 380

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     KK+  +L   + ++           +   +D    + + +   +   LKQ  
Sbjct: 381 GDAQIKAMKKVAGTLKITLAQYRAQ---AAFAMFASDLDAATRQQLTRGERLMALLKQPQ 437

Query: 422 -SDLSSEDVFQEITK 435
            +  + ED    +  
Sbjct: 438 YTPYAVEDQVASVWA 452


>gi|227501703|ref|ZP_03931752.1| F0F1 ATP synthase subunit alpha [Corynebacterium accolens ATCC
           49725]
 gi|227077728|gb|EEI15691.1| F0F1 ATP synthase subunit alpha [Corynebacterium accolens ATCC
           49725]
          Length = 557

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 105/442 (23%), Positives = 189/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ + + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 76  VAQNLDTNSIGVVVLGNYESLKEGDEVKRTGEVLSIPVGEDFLGRVINPLGQPIDGLGPI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 136 ESEEERV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVTI 194

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +               + +V A + +S 
Sbjct: 195 DTILNQKANWESGDKDKQVRCIYVAIGQKGSTIASVRRTLEEHGALDYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + + +  +G++VL+I D +T+ A + R I+     LP    YP  VF 
Sbjct: 255 GYKWLAPFSGAALGQQWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRLPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLAAY---RDLQAFAAFASDLDAASKAQ 431

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQS S     +
Sbjct: 432 LERGSRLVELLKQSESSPQPVE 453


>gi|325107761|ref|YP_004268829.1| ATP synthase F1 subcomplex subunit alpha [Planctomyces brasiliensis
           DSM 5305]
 gi|324968029|gb|ADY58807.1| ATP synthase F1 subcomplex alpha subunit [Planctomyces brasiliensis
           DSM 5305]
          Length = 517

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 100/435 (22%), Positives = 181/435 (41%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + +A + +   +N        + G ++ +         L+     G+ V      
Sbjct: 1   MKFKADEIASVIQKEVENFGAQLETREVGIVTEVGDGIARCYGLA-GAMAGEMVEF---T 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           S   G V  +  + V +  +G   +I+ G+ V   G+   +       GRV++ LG P+D
Sbjct: 57  SGVQGFVFNLEENSVGVVVLGDYLKINEGEEVRSLGQLLSVPVGDPMVGRVVDPLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D +  + +  P  ++RQ V++  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 117 GKGPIVTAD-TRPLETAAPGVVDRQPVKEPLQTGIKAIDAMTPIGRGQRELIIGDRKTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I    G+R   +   ++          ++VV A S +   ++
Sbjct: 176 TAIAIDAILNQKGKDVICIYVGCGQRSASIASVVDTLTEHGAMDYTIVVSAASSDPASMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     +AEYF  +G + L++ D +++ A + R+++      P    YP  +F    
Sbjct: 236 YIAPYAGAAMAEYFMYQGKHTLIVYDDLSKQATAYRQMSLLMRRPPGREAYPGDIFYCHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +E   G++TA+  +       +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSAEHGGGSMTALPVIETLEGEVSAYIPTNVISITDGQIYLEPDLFYSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A +   KK+  SL   +  F E      +G     +D    + + +
Sbjct: 356 AVNVGISVSRVGGNAQTKAMKKVAGSLKLDLAAFRELEAFAQLG---TDLDKATQQQLDR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GYRMVELLKQPQYQP 427


>gi|325915885|ref|ZP_08178181.1| proton translocating ATP synthase, F1 alpha subunit [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537852|gb|EGD09552.1| proton translocating ATP synthase, F1 alpha subunit [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 515

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 181/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +     +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIDAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYENLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E         +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYREL---AAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|170729693|ref|YP_001775126.1| F0F1 ATP synthase subunit alpha [Xylella fastidiosa M12]
 gi|226739959|sp|B0U5A0|ATPA_XYLFM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|167964486|gb|ACA11496.1| Sodium-transporting two-sector ATPase [Xylella fastidiosa M12]
          Length = 515

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 100/440 (22%), Positives = 188/440 (42%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L +   + +         G ++S++     +  L+     G+ +    K    
Sbjct: 6   NPSEISELIKTRIEQVKLSAESRNEGTVTSVSDGIVRIFGLAD-AMQGEMIELPNK---T 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  + +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  YALALNLERDSVGAVILGDYKHLREGDVAKTTGRILEVPVGKSLLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 122 TLGPT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGKTAM 180

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              ++ ++ D   K +   +G++   +   +      D L  ++VV AT+ ES  L+ ++
Sbjct: 181 AIDTVISQKDTGIKCVYVAIGQKASTIANIVRKLEENDALDHTIVVAATASESAALQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 AYAGCTMGEYFMDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTQGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 TTRKQLERGQRVTELMKQKQ 437


>gi|90411026|ref|ZP_01219040.1| flagellum-specific ATP synthase [Photobacterium profundum 3TCK]
 gi|90328239|gb|EAS44550.1| flagellum-specific ATP synthase [Photobacterium profundum 3TCK]
          Length = 440

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 144/432 (33%), Positives = 236/432 (54%), Gaps = 5/432 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
             L+Q          +  G +  +     T+  +     +G   + +  N D   +V+  
Sbjct: 7   SRLSQYQTKGIACRPIASGRLVRVVG--LTLEAIGCRAPVGSLCIVETLNGDLEAEVVGF 64

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + +I+++ P      +  G  V        +   +   GRVI+ +G P+DG   +   + 
Sbjct: 65  SGEILFLMPSEQLLGVMPGAKVTPVLHDNGLPVGSELLGRVIDGVGNPLDGLGDIF-TEK 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                S     ++R+ +++    GI+ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 124 RASFTSPAINPLSRKPIKEPLDVGIKAINGLLSVGKGQRIGLFAGSGVGKSVTLGMMTRG 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFI++ LG+   K++VV+ A +D SP++R     TA+TIAE
Sbjct: 184 TTAQVVVVGLIGERGREVKEFIDEILGEEGRKRAVVIAAPADTSPLMRLKGCQTALTIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G    +
Sbjct: 244 YFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGSGD 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+   
Sbjct: 304 QGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPA 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P +  +L+Q   +
Sbjct: 364 IVDDEHMLMSKAVRQILSICRKNQDLVSIGAYKPGTDPNIDQAFSFKPKLDAYLQQEMKE 423

Query: 424 LSSEDVFQEITK 435
                +   + +
Sbjct: 424 AVPYAMCVNMLR 435


>gi|53722421|ref|YP_111406.1| type III secretion system ATPase [Burkholderia pseudomallei K96243]
 gi|52212835|emb|CAH38869.1| putative type III secretion associated protein [Burkholderia
           pseudomallei K96243]
          Length = 449

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 240/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 11  EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG+P+DG   
Sbjct: 69  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 129 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 308 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 366 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 425

Query: 418 KQSPSDL-SSEDVFQEI 433
            Q   D  ++ED    +
Sbjct: 426 SQRTDDYAAAEDTVARL 442


>gi|217966572|ref|YP_002352078.1| ATP synthase F1, alpha subunit [Dictyoglomus turgidum DSM 6724]
 gi|226739874|sp|B8DYT2|ATPA_DICTD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|217335671|gb|ACK41464.1| ATP synthase F1, alpha subunit [Dictyoglomus turgidum DSM 6724]
          Length = 508

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 193/429 (44%), Gaps = 15/429 (3%)

Query: 5   LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           ++ + +  ++Y     +   GY+  +      V+ L+    +G+ VV +   S   G V+
Sbjct: 10  IDKIEKKIKEYDFSPRISNIGYVKHVGDGVAEVSLLN-SAFIGEMVVFE---SGIQGMVL 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +   G  E +  GD+V+   +  ++     + GRVI+ LG PIDG   +   
Sbjct: 66  SLKEDSVGVILFGKDEYVKEGDVVYSTSKILQVPTGNGFLGRVIDPLGNPIDGGGLIFP- 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
           +  + I ++ P   +R+ V++   TGIR ID   P+ HGQR  +      GK+T+   ++
Sbjct: 125 EAYVPIDNEAPSIFDREPVKEPLYTGIRTIDALIPIGHGQRELILGDRQTGKTTIALDTI 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
            ++ +     I   + ++   +   ++          ++V+    DE P LR +AP+   
Sbjct: 185 ISQKNYGTICIYVAIAQKRTNIARIVQTLREYGALSNTIVIATFPDEPPALRYIAPMAGC 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF  +G+ VL++ D +T+ A++ RE+A     +P    YP  +F     LLER   
Sbjct: 245 AMGEYFMRQGERVLIVYDDLTKHANTYREVALLLRRVPGREAYPGDIFYLHAHLLERAAK 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             K    G +TA+          +  I  ++ SI DG I L+ +L   G  P ++   SV
Sbjct: 305 LNKRLGGGALTALPIAETLSGEISTYIPTNLISITDGQIYLDTNLFNAGIRPAINVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     +++   L   + ++ E     +   +   +D+   K + +   + + L
Sbjct: 365 SRVGGSAQPKGMRQVAGRLRLDLAQYREY---AMFLEFGTELDMATKKKIERGRRVEELL 421

Query: 418 KQSPSDLSS 426
           KQ   ++  
Sbjct: 422 KQGAHEVQP 430


>gi|330831707|ref|YP_004394659.1| ATP synthase subunit alpha [Aeromonas veronii B565]
 gi|328806843|gb|AEB52042.1| ATP synthase subunit alpha [Aeromonas veronii B565]
          Length = 513

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYS-----KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +        K+     G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEIAELIKQRIAQFDVKSEARNEGTIVSVSDGIIRIHGLAD-AMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G  + +S G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYALALNLERDSVGAVIMGSYDGLSEGMKVKGTGRILEVPVGRGLLGRVLNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  + R+ V++  +TG++ ID   P+  GQR  +     +GK
Sbjct: 117 GKGPID-NDGFSPIEVIAPGVIERKSVDQPVQTGLKAIDAMIPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D   K +   +G++   +   +           ++VVVA++ E+  L+
Sbjct: 176 TAIAIDTIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 TSQLFNSGIRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + +KQ      S
Sbjct: 413 LDEATRKQLDHGVKVTELMKQKQYSPLS 440


>gi|228016172|gb|ACP51008.1| ATP synthase CF1 alpha subunit [Pinus squamata]
          Length = 507

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGXXXXXXXE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|34539227|gb|AAQ74497.1| F1-ATPase alpha subunit [Butomus umbellatus]
          Length = 415

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 95/410 (23%), Positives = 173/410 (42%), Gaps = 22/410 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L + +  G+ V     +S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGL-KEIQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ LG PIDG  SL   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKSLLGRVVDGLGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGE 197
           G++ +D   P+  GQR  +      GK+ +          L+  A+ +     +   +G+
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAKENEKLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++ +   N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQIFASANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER     +E   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 402


>gi|6561638|gb|AAF16982.1|AF197650_1 ATPase alpha subunit [Euptelea polyandra]
          Length = 424

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|260913587|ref|ZP_05920064.1| F-ATPase subunit alpha [Pasteurella dagmatis ATCC 43325]
 gi|260632363|gb|EEX50537.1| F-ATPase subunit alpha [Pasteurella dagmatis ATCC 43325]
          Length = 513

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSK-----NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +         N     G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVNEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEIV-NDGFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVVKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQYSPLS 440


>gi|225552414|ref|ZP_03773354.1| flagellar protein export ATPase FliI [Borrelia sp. SV1]
 gi|225371412|gb|EEH00842.1| flagellar protein export ATPase FliI [Borrelia sp. SV1]
          Length = 436

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 160/440 (36%), Positives = 250/440 (56%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     V   G +  I  +   V  L     +GD  +   +N   + 
Sbjct: 1   MSNFFENYLRQVDDIET--VSFVGRVQKIKGLL--VESLGPQCAIGDLCLIDQRNGKKVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    I  K+ P +NR   E    TG++V+D F P+  GQR+G+F+GSG+GKSTLL
Sbjct: 117 FLNNSYKELIFEKINP-INRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V L+ DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  S +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I DF+
Sbjct: 355 SRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIIDFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  ++    +  ++  K++
Sbjct: 415 SQGINETFDFENLEDEIKEI 434


>gi|126442369|ref|YP_001062985.1| type III secretion system ATPase [Burkholderia pseudomallei 668]
 gi|167898593|ref|ZP_02485994.1| type III secretion system ATPase [Burkholderia pseudomallei 7894]
 gi|167906935|ref|ZP_02494140.1| type III secretion system ATPase [Burkholderia pseudomallei NCTC
           13177]
 gi|167923128|ref|ZP_02510219.1| type III secretion system ATPase [Burkholderia pseudomallei BCC215]
 gi|254183794|ref|ZP_04890386.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
 gi|254186709|ref|ZP_04893225.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|126221860|gb|ABN85365.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 668]
 gi|157934393|gb|EDO90063.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pasteur 52237]
 gi|184214327|gb|EDU11370.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1655]
          Length = 443

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 240/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 5   EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 62

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG+P+DG   
Sbjct: 63  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 123 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 181

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 182 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 242 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 302 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 359

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 360 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 419

Query: 418 KQSPSDL-SSEDVFQEI 433
            Q   D  ++ED    +
Sbjct: 420 SQRTDDYAAAEDTIARL 436


>gi|6561637|gb|AAF16981.1|AF197649_1 ATPase alpha subunit [Dicentra sp. Qiu 95026]
          Length = 422

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|326335157|ref|ZP_08201354.1| ATP synthase F1 sector alpha subunit [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692687|gb|EGD34629.1| ATP synthase F1 sector alpha subunit [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 526

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 109/445 (24%), Positives = 172/445 (38%), Gaps = 36/445 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   +   + + G +  +      +  LS+ V  G+ V  +       G V+ +  D
Sbjct: 15  KQLANFDASVSLEEVGTVLEVGDGIARIFGLSK-VENGELVHFESGQE---GMVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G   +I  GD+V        I       GRVIN LG+PIDG   +      M 
Sbjct: 71  HVGVVLLGSSTQIKEGDIVKRTKTIASIKVGEGIVGRVINTLGEPIDGKGPILGELYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
              K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 FERKAPGVIYRQPVNEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          + V+ A + +   ++  AP   V
Sbjct: 191 FYDAGNPVYCIYVAIGQKASTVAGIAKTLEDAGALAYTTVLAANASDPAPMQVYAPFAGV 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAMAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             K+                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VIKDDNVARNMNDLPESIKHLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     +F E   +     +   +
Sbjct: 371 SDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQFRE---LAAFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDL 424
           D      + +     + LKQS +D 
Sbjct: 428 DAATSNVIEKGKRNVEILKQSSNDP 452


>gi|296531772|ref|ZP_06894594.1| H+-transporting two-sector ATPase FliI [Roseomonas cervicalis ATCC
           49957]
 gi|296267911|gb|EFH13716.1| H+-transporting two-sector ATPase FliI [Roseomonas cervicalis ATCC
           49957]
          Length = 448

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 171/419 (40%), Positives = 258/419 (61%), Gaps = 3/419 (0%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEE 80
           + G ++++     +VT L + V +GD +  Q      + G+ +  + D     P G  E 
Sbjct: 26  RYGTLAAVRGAALSVTGLGEGVAIGDRMRVQRHGRPPVHGEFVAFSPDSAIAVPEGGTEG 85

Query: 81  ISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           +S G  ++      + PS  W GRV+++LG+P+DG   L +G   + +    P A++R+ 
Sbjct: 86  LSPGARLWLEEPLCLYPSDAWLGRVVDSLGRPMDGRGPLPQGRRGVRLRQPPPAALSRKL 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +    +TG+R +D+FTP+C GQR+G+FA SG+GKSTL+ M AR    D +++ LVGERGR
Sbjct: 146 IGARLETGLRALDVFTPICRGQRLGIFAASGVGKSTLIGMLARFVAADVIVLGLVGERGR 205

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF++  LG+   ++SVVVV+TSDE  + R+ A   ++ IAE+F ++G  V L+LDSI
Sbjct: 206 EVREFLDHVLGEAGRRRSVVVVSTSDEPALSRRRAAQASLAIAEHFRAEGRQVFLLLDSI 265

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR AH+ REI   +GE   AR Y  SVF+ELP LLER GP  + +G+ITA+ +VLVDGD+
Sbjct: 266 TRLAHAQREIGLAAGEPATARSYTPSVFTELPALLERAGPGPEGEGDITAIFTVLVDGDD 325

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           H++PI+D+VR ILDGHIVL+R + E GR+P +D L SVSR   +  SA+E  L++    L
Sbjct: 326 HDEPISDAVRGILDGHIVLDRRIGERGRWPAIDVLRSVSRALPRCHSAEENALLAEARRL 385

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEITKKL 437
           +    +  ++  +G YRPG D  +D A+   P +   L Q   + SS  + F  +   L
Sbjct: 386 MATHADMAEMIRLGAYRPGSDAGVDAAIAHQPGLEALLAQGVDERSSTGEAFARLRASL 444


>gi|269819632|gb|ACZ44927.1| F1-ATPase alpha subunit [Kupea martinetugei]
          Length = 398

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 91/392 (23%), Positives = 163/392 (41%), Gaps = 20/392 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
           +  G+ V      S   G  + +  + V I   G    I  GDLV   G    +      
Sbjct: 5   IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKAL 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG P+DG  +L        +  K P  + R+ V +  +TG++ +D   P+  G
Sbjct: 62  LGRVVDALGVPLDGRGALSDH-ARRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGD 212
           QR  +      GK+ +      +               +   +G++   V + ++     
Sbjct: 121 QRELLIGDRQTGKTAIAIDTILNQKQMNSRGTSDTLYCVYVAIGQKRSTVAQLVKMLSEA 180

Query: 213 NL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++ 
Sbjct: 181 NALEYSILVAATASDPAPLQFIAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSL 240

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVR 329
                P    +P  VF    RLLER          G++TA+  +     + +  I  +V 
Sbjct: 241 LLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLTALPVIETQAGDVSAYIPTNVI 300

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +
Sbjct: 301 SITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSLKLELAQYRE---V 357

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                +   +D      +++   + + LKQ  
Sbjct: 358 AAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 389


>gi|117619857|ref|YP_858681.1| F0F1 ATP synthase subunit alpha [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|190358226|sp|A0KQY0|ATPA_AERHH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|117561264|gb|ABK38212.1| ATP synthase F1, alpha subunit [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 513

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYS-----KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +        K+     G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEIAELIKQRIAQFDIKSEARNEGTIVSVSDGIIRIHGLAD-AMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G  + +S G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYALALNLERDSVGAVIMGSYDGLSEGMKVKGTGRILEVPVGRGLLGRVLNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  + R+ V++  +TG++ ID   P+  GQR  +     +GK
Sbjct: 117 GKGPID-NDGFSPIEVIAPGVIERKSVDQPVQTGLKAIDAMIPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D   K +   +G++   +   +           ++VVVA++ E+  L+
Sbjct: 176 TAIAIDTIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 TSQLFNSGIRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + +KQ      S
Sbjct: 413 LDDATRKQLDHGQKVTELMKQKQYSPLS 440


>gi|56964031|ref|YP_175762.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16]
 gi|56910274|dbj|BAD64801.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16]
          Length = 437

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 164/443 (37%), Positives = 241/443 (54%), Gaps = 19/443 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNS 56
           MQK ++ +      ++ +     G +        T+        +G+          K +
Sbjct: 1   MQKLIDHV------HTLSPYKWYGQVRHAAG--LTIESAGPRAFIGELCYIWASPDQKGT 52

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
               +V+    D + + P+     I+ G  V   G+   ++      G+++N +G+P   
Sbjct: 53  KVRAEVVGFKDDRILLMPLDDTRRIAPGSYVEGTGKPLNVACGPSLIGQIVNGVGEPFLQ 112

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +LG  D +    +  P  + R R+ +    G+R ID    +  GQR+G+FAGSG+GKS
Sbjct: 113 SAALGDTDANYSTDNSPPNPLERPRISEIMSVGVRAIDGLLTMGKGQRVGIFAGSGVGKS 172

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
           TL+SM A+    D  +I+L+GERGREV+EF+  D   + LKKSVVVVATSD+  +LR   
Sbjct: 173 TLMSMIAKQSDADVNVIALIGERGREVKEFVERDLGEEGLKKSVVVVATSDQPALLRVKG 232

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
             TA  IAEYF  KG NV L++DS+TRFA + REI    GE P  +GYP SVF+ +P+LL
Sbjct: 233 AQTATAIAEYFRDKGKNVNLMMDSVTRFAMAQREIGLAIGEPPTTKGYPPSVFAMMPKLL 292

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G ++   G+IT + +VLVDGD+ N+PIAD+VR ILDGH VL+R LA  G+YP V+ L
Sbjct: 293 ERSGTNQS--GSITGLYTVLVDGDDMNEPIADAVRGILDGHFVLDRQLANRGQYPAVNVL 350

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSRL       D           +  +E++ D+  +G Y+ G    +D A+H  P + 
Sbjct: 351 KSVSRLMKDLVENDHLHAAKLFRQRLADYEQSEDLISLGAYKQGSSKDIDAAIHDHPAML 410

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           DFLKQ   ++   D F E   KL
Sbjct: 411 DFLKQ---EVEESDSFAETKTKL 430


>gi|51598548|ref|YP_072736.1| flagellum-specific ATP synthase [Borrelia garinii PBi]
 gi|51573119|gb|AAU07144.1| flagellum-specific ATP synthase [Borrelia garinii PBi]
          Length = 436

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 157/440 (35%), Positives = 251/440 (57%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH-QGKNSDNL 59
           M    E   +  +D     V   G +  I  +   V  L      GD  +  Q  N    
Sbjct: 1   MSNFFENYLRQVDDIET--VSFVGRVQKIKGLL--VESLGPQCAFGDLCLIDQRNNKKVF 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             K         K+ P +NR   E+   TG++V+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 117 FLKNRYKELTFEKINP-INRSIFEEQILTGVKVLDGFLPVEKGQRVGIFSGAGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V L+ DSITRFA++ RE++ + GE PV++GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFRDQGKDVALLFDSITRFANAKREMSLSLGEPPVSKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINILSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR  ++  + +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I DF+
Sbjct: 355 SRSINRIMNLEKQKLIMKARNLLSIYKDYEDLIRTGIYIKGSNKDVDFAISKYPKIIDFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  +++   +  ++  +++
Sbjct: 415 SQGINEIFDFENLEDEIREI 434


>gi|195941358|ref|ZP_03086740.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi 80a]
 gi|216264447|ref|ZP_03436439.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 156a]
 gi|215980920|gb|EEC21727.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 156a]
          Length = 436

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 160/440 (36%), Positives = 252/440 (57%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     V   G +  I  +   V  L     +GD  +   +N   + 
Sbjct: 1   MSNFFENYLRQVDDIET--VSFVGRVQKIKGLL--VESLGPQCAIGDLCLIDQRNGKKVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    I  K+ P +NR   E    TG++V+D F P+  GQR+G+F+GSG+GKSTLL
Sbjct: 117 FLNNSYKELIFEKINP-INRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           SM A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 SMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V+L+ DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFREQGKDVVLLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  S +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I +F+
Sbjct: 355 SRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  ++    +  ++  K++
Sbjct: 415 SQGINETFDFENLEDEIKEI 434


>gi|20146552|gb|AAM12430.1| ATP synthase alpha subunit [Clavija domingensis]
          Length = 399

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 170/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+ +    V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGNGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-----------DKVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +              +  +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSSSETNYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDGSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|6561686|gb|AAF17030.1|AF197698_1 ATPase alpha subunit [Myristica fragrans]
          Length = 421

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|224531735|ref|ZP_03672367.1| flagellar protein export ATPase FliI [Borrelia valaisiana VS116]
 gi|224511200|gb|EEF81606.1| flagellar protein export ATPase FliI [Borrelia valaisiana VS116]
          Length = 436

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 247/430 (57%), Gaps = 7/430 (1%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH-QGKNSDNLGQVIRINLDI 69
           L +      V   G +  I  +   V  L     +GD  +  Q  N     +V+  N   
Sbjct: 9   LRQVDDIETVSFVGRVQKIKGLL--VESLGPQCAVGDLCLIDQRNNKKVCAEVLGFNGPY 66

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +        I +G+ V+   +   I+ S    GRVI++LG+PID   +         I
Sbjct: 67  VSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGAFLNNRYKELI 126

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K+ P +NR   E+   TG++V+D F P+  GQR+G+F+G+G+GKSTLL+M A++   D
Sbjct: 127 FEKINP-INRSIFEEQILTGVKVLDGFLPVAKGQRVGIFSGAGVGKSTLLAMIAKNSNAD 185

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      A  IAEYF  
Sbjct: 186 VNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRE 245

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +V L+ DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G      G++
Sbjct: 246 QGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFFEIPILLERSG-FNGNGGSV 304

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T   +VLV+GD+  +P+ D+++++LDGHI+L+R L + G YP ++ L+S SR   +  S 
Sbjct: 305 TGFYTVLVEGDDFTEPVVDNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSVHRIMSL 364

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I DF+ Q  ++    
Sbjct: 365 EKQKLIMKARNLLSVYKDYEDLVRTGIYLKGSNKDVDFAISKYPKIIDFISQGINETFDF 424

Query: 428 DVFQEITKKL 437
           +  ++  +++
Sbjct: 425 ENLEDEIREI 434


>gi|130076696|gb|ABO31968.1| ATPase alpha subunit [Liquidambar styraciflua]
          Length = 429

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 92/413 (22%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V          G  + +  + V I   G    I  
Sbjct: 3   GRVVSLGDGIARVYGLNE-IKAGEMVEFASGAK---GIALNLENENVGIVVFGSDTAIKE 58

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 59  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 118 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQNNLNSRATSESETLYCV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 178 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 238 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 298 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 358 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 407


>gi|163751420|ref|ZP_02158645.1| ATP synthase subunit A [Shewanella benthica KT99]
 gi|161328723|gb|EDP99871.1| ATP synthase subunit A [Shewanella benthica KT99]
          Length = 513

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAIVMGPFATLAEGDKVRTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + RQ V +  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPID-NDGYSPVEVIAPGVIERQSVSQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   +G++   V   +         + ++VVVAT+ E+  L 
Sbjct: 176 TALAIDAIINQKDTGIKCVYVAIGQKASTVANVVRKLEEHGALENTIVVVATASEAAALL 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNIKYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDEATRAQLEHGERVTELMKQKQ 435


>gi|33440412|gb|AAQ19114.1| ATPase alpha subunit [Caldesia oligococca]
          Length = 385

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 167/387 (43%), Gaps = 21/387 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 6   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL + +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 63  VVDALGVPIDGKGSLSENE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDSLVPIGRGQRE 121

Query: 165 GVFAGSGIGK----------STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK             L+  A+ +     +   +G++   V + ++     + 
Sbjct: 122 LIIGDRQTGKTAIAVDTILNQKSLNQKAKENDKLYCVYVAIGQKRSTVAQLVQIMSSSHA 181

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
            + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 182 LEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 241

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER     +E   G++TA+  +     + +  I  +V SI
Sbjct: 242 RRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVSAYIPTNVISI 301

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 302 TDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAA 358

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLK 418
              +   +D      +++   + + LK
Sbjct: 359 FAQFGSDLDAATQALLNKGERLTEVLK 385


>gi|6561671|gb|AAF17015.1|AF197683_1 ATPase alpha subunit [Atherosperma moschatum]
          Length = 421

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|34539431|gb|AAQ74599.1| F1-ATPase alpha subunit [Sciaphila albescens]
          Length = 410

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 168/405 (41%), Gaps = 21/405 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  D V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IRAGEMVEFA---SGVKGIALNLENDHVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGLPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERG 199
           ++ +D   P+  GQR  +      GK+ +      +               +   +G++ 
Sbjct: 116 LKAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQKR 175

Query: 200 REVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     + L  S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQIPSFANALGYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPRDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSF 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 397


>gi|6561672|gb|AAF17016.1|AF197684_1 ATPase alpha subunit [Daphnandra micrantha]
          Length = 424

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 359 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 411


>gi|20146600|gb|AAM12454.1| ATP synthase alpha subunit [Palaquium formosanum]
          Length = 399

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERADKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +     +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSNLDAATQALLNRGARLTE 399


>gi|300722643|ref|YP_003711933.1| flagellum-specific ATP synthase [Xenorhabdus nematophila ATCC
           19061]
 gi|297629150|emb|CBJ89746.1| flagellum-specific ATP synthase [Xenorhabdus nematophila ATCC
           19061]
          Length = 458

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 162/451 (35%), Positives = 243/451 (53%), Gaps = 22/451 (4%)

Query: 5   LETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           L  L  L +   K L     V + G ++  T +    T L  ++ LG   + + +N   +
Sbjct: 9   LAALDVLEKRLEKRLEKTPKVRRYGRLTRATGLILEATGL--HMPLGATCLIERQNGKII 66

Query: 60  ----GQVIRINLDIVYICPVGIGEEISLGDLVFH--------WGRFRISPSACWCGRVIN 107
                +V+  N + + + P+   E I  G  V+          GR R+       GRV++
Sbjct: 67  EEVESEVVGFNGEKLLLMPMEELEGIVPGARVYARSYGEEAGSGR-RLPLGPELLGRVLD 125

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG  +         + +     + R  +      G+R I+    +  GQR+G+F
Sbjct: 126 GAGRPLDGLPA-PDTSYRAPLTTTPFNPLQRTPISDVLDVGVRAINSLLTVGRGQRMGLF 184

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVVV A +D 
Sbjct: 185 AGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGVEGLSRSVVVAAPADV 244

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+LR      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SV
Sbjct: 245 SPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSV 304

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LP L+ER G    + G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G
Sbjct: 305 FAKLPALVERAGNGVSDGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESG 364

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D  AS+SR           + +     L+  ++  RD+  +G Y  G D +LDKA
Sbjct: 365 HYPAIDIAASISRAMTALIDNTHYRRIQFFKQLLSSYQRNRDLINVGAYAAGSDPLLDKA 424

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   P +  FL+Q   + S  D+     ++L
Sbjct: 425 IELYPYMAQFLQQGIDERSEYDMACTQLQQL 455


>gi|229826305|ref|ZP_04452374.1| hypothetical protein GCWU000182_01677 [Abiotrophia defectiva ATCC
           49176]
 gi|229789175|gb|EEP25289.1| hypothetical protein GCWU000182_01677 [Abiotrophia defectiva ATCC
           49176]
          Length = 423

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 159/416 (38%), Positives = 243/416 (58%), Gaps = 11/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDIVYICPVGIGEE 80
           G ++ +     T+  L     + D  +    N        +V+    + + + P G  E 
Sbjct: 6   GKVTKLIG--LTIESLGPSANINDLCIIYANNKYSKGTYAEVVGFRDNRILLMPYGDLEG 63

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           + +G LV   G  F +       G V++ LG+PID   +  K D S  + +  P  ++RQ
Sbjct: 64  VGVGSLVESTGAPFHVDVGYDMLGVVVDGLGRPIDTSVTFEKED-SYSVEAMPPDPLSRQ 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +E+    G++ +D    +  GQR+G+FAGSG+GKSTL+ MFAR+   D  +I+L+GERG
Sbjct: 123 MIEEVLPLGVKAVDALLTVGKGQRVGIFAGSGVGKSTLMGMFARNTKADVNVIALIGERG 182

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREFI  D   + +++SVVVVATSD+  ++RK A  TA  IAE+F  KG++VLL++DS
Sbjct: 183 REVREFIERDLGEEGMRRSVVVVATSDQPALIRKKAAKTATAIAEFFRDKGEDVLLMMDS 242

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRF+ + REI   SGE PV RGYP SV+SE+P+LLER G  +   G+IT + +VLVDGD
Sbjct: 243 LTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGNGKD--GSITGLYTVLVDGD 300

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PIAD+ R ILDGH VL+R+LA++  YP +D L S+SR        + K+    + +
Sbjct: 301 DMNEPIADTARGILDGHFVLSRTLAQKNHYPAIDVLQSISRCMSAVADKEHKRFAGMMKN 360

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
           ++  +    D+  IG Y+ G +  +D A+ ++  +  FL QS  +    ED    +
Sbjct: 361 VMATYNGAEDLINIGAYKSGSNPDIDFAISKIKEVNAFLMQSTDEKFLFEDELAGL 416


>gi|27461615|gb|AAM95224.1| ATPase F1 alpha subunit [Orectanthe sceptrum]
          Length = 414

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 93/406 (22%), Positives = 166/406 (40%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L+Q +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNQ-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGNDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKALLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILTEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 398


>gi|326910764|gb|AEA11200.1| ATP synthase subunit 1 [Selaginella moellendorffii]
 gi|327176869|gb|AEA29876.1| ATP synthase subunit 1 [Selaginella moellendorffii]
          Length = 527

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 98/443 (22%), Positives = 178/443 (40%), Gaps = 22/443 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +   L  +      ++++ V + G + S+      V  L++ +  G+ V   G      G
Sbjct: 9   LHTLLRRMTGFGLGHTRSPVEEMGRVVSVGDGIARVEGLTR-IQAGELVDFAGG---VTG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +    V I   G    I  GD V   G    +       GRV++ALG  IDG  SL
Sbjct: 65  MALNLETGNVGIVIFGSDTAIREGDTVRRTGSIVDVPVGRAMLGRVVDALGSAIDGGGSL 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G G+    +  K P  + R  V+   +TG++ +D   P+  GQR  +      GKS +  
Sbjct: 125 GFGE-RGRVDVKAPGIVARAAVKDPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKSAIAV 183

Query: 180 MFARSDCFD----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
               +                +   +G++   V + +           S++V AT+ +  
Sbjct: 184 DTILNQKRANGVMSERERLYCVYVAIGQKRSTVAQVVSILGEGGALDYSIIVAATASDPA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +   + EYF   G + L++ D +++ + + R+++      P    +P  VF 
Sbjct: 244 PLQFLAPYSGCAMGEYFRDSGMHALIVYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFY 303

Query: 289 ELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +     + +  I  +V SI DG I L   L   G
Sbjct: 304 LHSRLLERAAKLGVRMGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFFRG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D      
Sbjct: 364 IRPAINVGLSVSRVGSAAQWKAMKQVCGSLKLDLAQYRE---VAAFAQFGSDLDAATKYL 420

Query: 407 VHQVPIIYDFLKQSPSDLSSEDV 429
           +++   + + LKQ      S + 
Sbjct: 421 LNRGARLTEVLKQPQYTPMSLEA 443


>gi|261407981|ref|YP_003244222.1| flagellar protein export ATPase FliI [Paenibacillus sp. Y412MC10]
 gi|329929287|ref|ZP_08283040.1| flagellar protein export ATPase FliI [Paenibacillus sp. HGF5]
 gi|261284444|gb|ACX66415.1| flagellar protein export ATPase FliI [Paenibacillus sp. Y412MC10]
 gi|328936656|gb|EGG33099.1| flagellar protein export ATPase FliI [Paenibacillus sp. HGF5]
          Length = 439

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 155/417 (37%), Positives = 241/417 (57%), Gaps = 9/417 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPVGI 77
           V   G ++ +  +   V        +GD        ++     +V+    + V + P+G 
Sbjct: 19  VRINGKVTQVIGLM--VESEGPDASIGDVCYIYPTKQSKPLKAEVVGFRDNKVLLMPLGE 76

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              I  G  V   G+   +   +   G+V++ LG+P+DG   +          +     +
Sbjct: 77  LHSIGPGCDVVGTGKPLSVQVGSELLGKVLDGLGQPLDGS-IIPARMPHYSTHNVPQNPL 135

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           NR RV++    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+L+G
Sbjct: 136 NRPRVQEPISIGVRAIDGLLSIGKGQRVGIFAGSGVGKSTLMGMIARNTSADVNVIALIG 195

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV +FI  D   + LK+SVV+VATSD+  ++R    L A TIAEYF  +G NV+L+
Sbjct: 196 ERGREVLDFIERDLGPEGLKRSVVIVATSDQPALIRIKGALIATTIAEYFRDRGLNVMLM 255

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G      G+ITA  +VLV
Sbjct: 256 MDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GSITAFYTVLV 313

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGHIVLNR++A +G +P +D LAS+SR+       ++     +
Sbjct: 314 DGDDMNEPIADAVRGILDGHIVLNRNIANKGHFPAIDVLASISRVMKDISPEEQIDASEN 373

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +  L+  ++++ D+  IG Y+ G +  +D+++  +  I+DF KQ  ++ ++ D  QE
Sbjct: 374 VKRLMAIYKDSEDLINIGAYQQGSNADIDESIEYIGRIWDFTKQKVNEKTTLDEVQE 430


>gi|74055037|gb|AAZ95842.1| FliI [Aeromonas hydrophila]
          Length = 443

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 150/407 (36%), Positives = 229/407 (56%), Gaps = 5/407 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +     T+  +     +G       ++     +V+  + D +++ P    + +  
Sbjct: 25  GKLTRVVG--LTLEAIGCRAAIGALCRIDTQDGMLEAEVVGFSGDRLFLMPSEQLKGVIP 82

Query: 84  GDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V        I       GRVI+ +G+P+DG   +           ++ P ++R+ + 
Sbjct: 83  GARVVPITEEHGIPVGMNLLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIH 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGREV
Sbjct: 142 QPMDVGVRAINAVLTVGQGQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREV 201

Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           +EFIED LG+    +SVVV A +D SP++R     TA+ IAEYF  +G NVLL++DS+TR
Sbjct: 202 KEFIEDILGEEGRARSVVVAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A + REIA   GE P  +GYP SVF++LP L+ER G     +G+ITA  +VL +GD+  
Sbjct: 262 YAQAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQ 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+     S    +L  +L     
Sbjct: 322 DPIADAARAILDGHIVLSRELADAGHYPAIDIEKSISRVMPMVTSPQHMELARTLKQFYS 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +++ RD+  IG Y  G D  +D+A+ Q P +  FL+Q   ++   D
Sbjct: 382 LYQQNRDLITIGAYSQGSDPRIDRAIVQKPYLDQFLQQGMREVIHYD 428


>gi|325684412|gb|EGD26580.1| ATP synthase F1 sector alpha subunit [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 506

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +   + +          G    
Sbjct: 13  SLIKQQLEHYDDKLDIEEVGVVTYVGDGIARAHGLNNVLS-SELLQFDNG---AYGIAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 69  LESNDVGIIILGKFDDIREGDRVKRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+   + ++ 
Sbjct: 128 KTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSLAIDTIL 187

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP +   
Sbjct: 188 NQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVEAGPSEPAPMLYIAPYSGTA 247

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 248 MGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 307

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 308 SKELGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFSGTRPAIDAGASVS 367

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 368 RVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG---SDLDQATQAKLARGRRTVEVLK 424

Query: 419 QSPS 422
           Q   
Sbjct: 425 QPLH 428


>gi|226199117|ref|ZP_03794679.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
 gi|225928892|gb|EEH24917.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei Pakistan 9]
          Length = 443

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 240/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 5   EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 62

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG+P+DG   
Sbjct: 63  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 123 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 181

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 182 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 242 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 302 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 359

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 360 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 419

Query: 418 KQSPSDL-SSEDVFQEI 433
            Q   D  ++ED    +
Sbjct: 420 SQRTDDYAAAEDTVARL 436


>gi|237752940|ref|ZP_04583420.1| flagellum-specific ATP synthase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375207|gb|EEO25298.1| flagellum-specific ATP synthase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 432

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 166/433 (38%), Positives = 248/433 (57%), Gaps = 9/433 (2%)

Query: 7   TLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            L  L E  +  NL    G I  +   +     L+    +GD V    +++ ++G V  +
Sbjct: 2   ALRNLRERLNGLNLSPTFGLIVKVEQGFLLANGLTP--RIGDIVRILSEDNQSMGMVTAL 59

Query: 66  NLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             D   I P    E   +GD V+ +    +I       GRVIN LG+ IDG  ++ +   
Sbjct: 60  EKDCFKITPFSFIEGTKVGDKVYLNTRGLQIPVGLEILGRVINPLGEAIDGKGAI-RAQG 118

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +M I+     AM R  + + F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R 
Sbjct: 119 AMPIIRAPIEAMKRGMINEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRG 178

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                 +I+L+GERGREV EF+E  LG +L  +V++VATSD+SP++RK     A+++AEY
Sbjct: 179 ATAKIKVIALIGERGREVPEFVEKNLGGDLTNTVLIVATSDDSPLMRKYGAFAAMSVAEY 238

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F +KG++VL ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E + 
Sbjct: 239 FKAKGEDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAGKEEGQ- 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+RSL + G YPP++ L S SRL    
Sbjct: 298 GSITAYFTVLVEGDDMSDPIADQSRSILDGHIVLDRSLTDFGIYPPINVLNSASRLMGDV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            + +  +       L    +E   +  IG Y+ G D  LD+A+ +  ++ ++LKQ   D 
Sbjct: 358 ANKEHIEAARKFRRLYAMLKENEVLIRIGAYQAGSDKDLDEAISKKGVMEEYLKQ---DC 414

Query: 425 SSEDVFQEITKKL 437
                ++E  +KL
Sbjct: 415 DVAITYEESVQKL 427


>gi|169303172|gb|ACA53183.1| ATP synthase alpha subunit [Callithamnion corymbosum]
          Length = 404

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 95/404 (23%), Positives = 165/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L      G+ +    ++   +G  + +  D V +  +G G 
Sbjct: 7   VNNIGTVLQVGDGIARVYGLDD-AMAGELLQFDDQDQ-TIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  ++     + GRV+N L +PID   +    D  + I S  P  + R
Sbjct: 65  NILEGSSVQSTGKIAQVPVGEEFLGRVVNPLAQPIDAKGTPKASDTRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF   G   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYTGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|206890201|ref|YP_002248118.1| flagellar protein export ATPase FliI [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742139|gb|ACI21196.1| flagellar protein export ATPase FliI [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 437

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 166/438 (37%), Positives = 237/438 (54%), Gaps = 11/438 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +Q  L    ++ E+ S   +   G ++    +   V  +     +GD        +    
Sbjct: 4   IQSFLSKAEEVLEEISP--IKIYGKVTKAVGLI--VESVGIDASIGDICEIITDENSVEA 59

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +V+      + + P+G    I  G  +   G+   I  +    GR+I+  G PIDG  SL
Sbjct: 60  EVVGFKNGTILLSPLGEVYGIKAGATIAVKGKQSYIPLNNDILGRIIDGTGNPIDGGVSL 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   I  +V   + R+ +++    GIR I+       GQ+IG+ AGSG+GKS LL 
Sbjct: 120 --KGKPFPIYKEVINPLEREIIKEPLDLGIRAINALITCGKGQKIGIMAGSGVGKSVLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M AR    D  +I+L+GERGREVREFIE+ L D LKKSVVVV+TSD   + R      A 
Sbjct: 178 MIARYTSADINVIALIGERGREVREFIENDLADGLKKSVVVVSTSDAPALARIRGAFLAT 237

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAEYF  +G +VLL++DS+TRFA + REI   +GE P  +GYP SVF+ +P+LLER+G 
Sbjct: 238 AIAEYFREQGKHVLLLMDSLTRFAMAQREIGLAAGEPPTMKGYPPSVFNLMPKLLERVG- 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             K  G+IT + +VLV+GD+  DP+AD+ R+ILDGHIVL+R LA    YP +DPL S+SR
Sbjct: 297 VIKNGGSITGIYTVLVEGDDLTDPVADASRAILDGHIVLSRELANRNHYPAIDPLKSISR 356

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           L          K    L  +I  +    DI  IG Y+ G +  +D A+  +  I  FLKQ
Sbjct: 357 LMKDIVDDKHLKYAGRLLDIIATYARYEDIINIGAYKEGTNAQVDFAIKMMDKINSFLKQ 416

Query: 420 SPSDLSSEDVFQEITKKL 437
             S+ +    F+E  +KL
Sbjct: 417 DISEKAD---FKESLQKL 431


>gi|164685622|gb|ABY66757.1| atp1 [Asclepias viridis]
          Length = 411

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 169/406 (41%), Gaps = 23/406 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+++      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTILNQKLMNSRSTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           +   V + ++    D L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 KRSTVAQLVKIL-EDALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 234

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 235 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 294

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 295 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 354

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 355 SKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVSKQPQ 397


>gi|148825240|ref|YP_001289993.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittEE]
 gi|229846568|ref|ZP_04466676.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 7P49H1]
 gi|260582253|ref|ZP_05850046.1| ATP synthase F1, alpha subunit [Haemophilus influenzae NT127]
 gi|166201666|sp|A5UA09|ATPA_HAEIE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148715400|gb|ABQ97610.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittEE]
 gi|229810661|gb|EEP46379.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 7P49H1]
 gi|260094621|gb|EEW78516.1| ATP synthase F1, alpha subunit [Haemophilus influenzae NT127]
          Length = 513

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 103/448 (22%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|90023608|ref|YP_529435.1| F0F1 ATP synthase subunit alpha [Saccharophagus degradans 2-40]
 gi|119367963|sp|Q21DK6|ATPA_SACD2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|89953208|gb|ABD83223.1| ATP synthase F1, alpha subunit [Saccharophagus degradans 2-40]
          Length = 513

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 180/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL V       G + S+T     +  L+  V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKQRIDNLAVSTEAQNEGTVVSVTDGIIRIHGLAD-VMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +      CGRV++ALG PIDG
Sbjct: 60  -VYGIALNLERDSVGAVVLGDYQGVAEGQSCKCTGRILEVPVGEELCGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +        I    P  + RQ V++  + G++ +D   P+  GQR  +      GK+
Sbjct: 119 KGPINAKKTDA-IEKIAPGVIARQSVDQPVQIGLKAVDTMVPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      K I   +G++   V   +           ++VV AT+ +   ++ 
Sbjct: 178 AVAVDAIINQKGTGIKCIYVAIGQKASSVASVVRKLEEHGAMDHTIVVAATASDPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEQLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNAGIRPAMNAGISVSRVGGSAQTKVIKKLSGGIRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DEATKAQLEHGERVTELMKQKQYSPQS 441


>gi|145630337|ref|ZP_01786118.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae R3021]
 gi|145636251|ref|ZP_01791920.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittHH]
 gi|144984072|gb|EDJ91509.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae R3021]
 gi|145270416|gb|EDK10350.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittHH]
 gi|301169201|emb|CBW28798.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Haemophilus influenzae 10810]
 gi|309972363|gb|ADO95564.1| Membrane-bound ATP synthase, F1 sector, alpha-subunit [Haemophilus
           influenzae R2846]
          Length = 513

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 103/448 (22%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|260772326|ref|ZP_05881242.1| flagellum-specific ATP synthase FliI [Vibrio metschnikovii CIP
           69.14]
 gi|260611465|gb|EEX36668.1| flagellum-specific ATP synthase FliI [Vibrio metschnikovii CIP
           69.14]
          Length = 440

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 149/437 (34%), Positives = 233/437 (53%), Gaps = 5/437 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E LAQ          V  G +  +  +    T       +G        + +   
Sbjct: 1   MLSLAERLAQYKTQGLTTRPVASGKLVRVVGLTLEATG--CRAPIGSLCKVDTMSGEMEA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ P      I  G  V        ++      GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGDSLFLMPSEQVNGILPGAKVTPLTEEAGLAVGMELLGRVIDGVGNPLDGLGPI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D      ++    + R+ + +    GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 Y-TDQQATFNAQPINPLLRKPITEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFIE+ LG D  +++VVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRAVVVAAPADSSPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LAIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGGPNQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P +  +L+
Sbjct: 358 RVMPQITTDEHMLMSRAVRQILSICRKNQDLVSIGAYKPGTDKAIDSAFTLKPRLDQYLQ 417

Query: 419 QSPSDLSSEDVFQEITK 435
           Q   +    ++   + K
Sbjct: 418 QEMKESVPYEMCVGMLK 434


>gi|271502663|ref|YP_003335689.1| ATP synthase F1 subunit alpha [Dickeya dadantii Ech586]
 gi|270346218|gb|ACZ78983.1| ATP synthase F1, alpha subunit [Dickeya dadantii Ech586]
          Length = 513

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    + +  P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPL-EHDGFSAVETIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|260853456|ref|YP_003227347.1| putative lateral flagellum-specific ATP synthase [Escherichia coli
           O26:H11 str. 11368]
 gi|257752105|dbj|BAI23607.1| predicted lateral flagellum-specific ATP synthase [Escherichia coli
           O26:H11 str. 11368]
 gi|323158036|gb|EFZ44136.1| flagellum-specific ATP synthase [Escherichia coli EPECa14]
          Length = 445

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 229/425 (53%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I       GRV+N LG+P+DG   L   DL +  +    
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESCLGRVVNGLGEPLDGKGRLNGNDL-LPPLPPSV 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-AGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|94676613|ref|YP_588612.1| ATP synthase F1, alpha subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|118573473|sp|Q1LTV2|ATPA_BAUCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|94219763|gb|ABF13922.1| ATP synthase F1, alpha subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 513

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 109/444 (24%), Positives = 190/444 (42%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYS-----KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +         +++   G I S+      +  LS+ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIVEFDLTSIIYNEGIILSVIDGIIRIHGLSE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            ++    + +  D V    +G    ++ G  V   GR   +       GR++N LG PID
Sbjct: 58  -NSFAIALNLERDEVGAVVMGPYSHLTEGMKVKCTGRILEVPVGHSLLGRIVNTLGIPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L +  L   I +  P  + RQ + +  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGKL-ENKLFSPIETNAPNVIERQSISEPIQTGYKSIDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           STL      +  +   K I   +G++   +   ++     N    +++V AT+ +S  L+
Sbjct: 176 STLAIDTIINQRNSDIKCIYVAIGQKASTINNVVQKLEEHNALINTIIVTATASDSVALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF + G+N L+I D +++ A + R+I+      P    YP  +F    
Sbjct: 236 YLAPYAGCVMGEYFRNIGENALVIYDDLSKQAIAYRQISLLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  I  +V SI DG I L
Sbjct: 296 RLLERAARVSANYVETYTKGKIKGKTGSLTALPIIETQAGDVSSFIPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   K + S +   + ++ E         +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGSAAQTKIIKTVSSGIRTTLAQYRELE---AFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D +  K ++    + + LKQ   
Sbjct: 413 LDEVTRKQINYGKKVTELLKQKQH 436


>gi|20146608|gb|AAM12458.1| ATP synthase alpha subunit [Samolus repens]
          Length = 399

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|20146570|gb|AAM12439.1| ATP synthase alpha subunit [Eurya sp. Chung & Anderberg 1406]
          Length = 399

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|17989450|ref|NP_542083.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
 gi|17985329|gb|AAL54347.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str.
           16M]
          Length = 380

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 202/370 (54%), Positives = 263/370 (71%), Gaps = 1/370 (0%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
           V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G   M   
Sbjct: 3   VLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAE 62

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           S  P A+ R RV++G +TG+ VIDIFTPLC GQR G+FAGSG+GKSTLL+M  R+  FD 
Sbjct: 63  SLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRTGIFAGSGVGKSTLLAMMTRAADFDT 122

Query: 190 VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IAEYF   G
Sbjct: 123 VVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLG 182

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-KEKGNIT 308
            NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   +  G+IT
Sbjct: 183 QNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSIT 242

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA   W+ +
Sbjct: 243 GIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPE 302

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP    S+D
Sbjct: 303 QRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDD 362

Query: 429 VFQEITKKLQ 438
            + ++   L+
Sbjct: 363 PYNDLAAALR 372


>gi|251793673|ref|YP_003008403.1| F0F1 ATP synthase subunit alpha [Aggregatibacter aphrophilus
           NJ8700]
 gi|247535070|gb|ACS98316.1| ATP synthase F1, alpha subunit [Aggregatibacter aphrophilus NJ8700]
          Length = 513

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V+      G I S++     +  LS+ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFNVESEARNTGTIVSVSDGIIRIHGLSE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGVEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-KNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQYAPLS 440


>gi|319775592|ref|YP_004138080.1| F1 sector of membrane-bound ATP synthase subunit alpha [Haemophilus
           influenzae F3047]
 gi|329122362|ref|ZP_08250949.1| ATP synthase F1 sector alpha subunit [Haemophilus aegyptius ATCC
           11116]
 gi|317450183|emb|CBY86399.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Haemophilus influenzae F3047]
 gi|327473644|gb|EGF19063.1| ATP synthase F1 sector alpha subunit [Haemophilus aegyptius ATCC
           11116]
          Length = 513

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 103/448 (22%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|15419579|gb|AAK97074.1| ATPase F1 alpha subunit [Degeneria vitiensis]
          Length = 422

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 94/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 409


>gi|34539321|gb|AAQ74544.1| F1-ATPase alpha subunit [Hemerocallis sp. Hansen s.n.]
 gi|34539343|gb|AAQ74555.1| F1-ATPase alpha subunit [Johnsonia lupulina]
          Length = 418

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|145638603|ref|ZP_01794212.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittII]
 gi|145272198|gb|EDK12106.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittII]
 gi|309750104|gb|ADO80088.1| Membrane-bound ATP synthase, F1 sector, alpha-subunit [Haemophilus
           influenzae R2866]
          Length = 513

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 102/444 (22%), Positives = 184/444 (41%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQF 436


>gi|212712647|ref|ZP_03320775.1| hypothetical protein PROVALCAL_03742 [Providencia alcalifaciens DSM
           30120]
 gi|212684863|gb|EEB44391.1| hypothetical protein PROVALCAL_03742 [Providencia alcalifaciens DSM
           30120]
          Length = 513

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVNDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-EHDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +         + ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALENTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|169303170|gb|ACA53182.1| ATP synthase alpha subunit [Callithamnion corymbosum]
          Length = 404

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 165/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L      G+ +    ++   +G  + +  D V +  +G G 
Sbjct: 7   VNNIGTVLQVGDGIARVYGLDD-AMAGELLQFDDQDQ-TIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID   +    D  + I S  P  + R
Sbjct: 65  NILEGSSVQSTGKIAQIPVGEEFLGRVVNPLAQPIDAKGTPKASDTRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF   G   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYTGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|300087660|ref|YP_003758182.1| ATP synthase F1 subunit alpha [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527393|gb|ADJ25861.1| ATP synthase F1, alpha subunit [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 503

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 94/424 (22%), Positives = 170/424 (40%), Gaps = 14/424 (3%)

Query: 5   LETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  + +  E++  ++ V   G +  +      +  L+      + +   G     +G  +
Sbjct: 9   VSVIKEQIENFGSDIAVADVGTVIEVGDGIARIHGLA-SAEYNELLEFPGG---VMGIAL 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V    +G    I  GD V    R   +       GRV+N LG+PIDG   L K 
Sbjct: 65  NLEEDSVAAILLGEDTFIKEGDEVRRTNRIVEVPVGEEMIGRVVNPLGQPIDGKGPL-KT 123

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +    P  + RQ V+   +TGI+ ID   P+  GQR  +      GK+ +     
Sbjct: 124 TKRRAVERVAPNVVTRQSVDTPVQTGIKSIDAMIPVGRGQRELIIGDRSTGKTAVAIDTI 183

Query: 183 RSDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++  ++ + +         + ++VV A++ +    + +AP    
Sbjct: 184 INQKGGDLICIYVAIGQKTSKIAQTVGILEKYGAMEHTIVVAASASDPVAFQYIAPYAGC 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + E F   G   L++ D +T+ A + R+++      P    YP  VF    RLLER   
Sbjct: 244 AMGEEFMDNGKEALIVYDDLTKHAWAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAK 303

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             K+   G++TA+  +     + +  +  +V SI DG I L   L   G  P ++   SV
Sbjct: 304 LNKDNGGGSLTALPVIETQAQDVSAYVPTNVISITDGQIYLEPDLFNAGVRPALNVGISV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK+   L   + +++        G     +D      + +   I + L
Sbjct: 364 SRVGSAAQTKAIKKVAGKLKLEMSQYQALAAFAQFG--TSELDKATKAQLERGQRITEVL 421

Query: 418 KQSP 421
           KQ  
Sbjct: 422 KQPQ 425


>gi|169303176|gb|ACA53185.1| ATP synthase alpha subunit [Callithamnion sp. C2]
          Length = 404

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 98/404 (24%), Positives = 164/404 (40%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L   V  G+ +         +G  + +  D V +  +G G 
Sbjct: 7   VANVGTVLQVGDGIARVYGLDD-VMAGELLQFD-DQEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G   +I     + GRV+N L +PID   +    D  + I S  P  + R
Sbjct: 65  NILEGSSVTSTGNIAQIPVGQEFLGRVVNPLAQPIDAKGTPNPSDTRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF  KG   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYKGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKTTQNQLARGQRLREIL 404


>gi|240137327|ref|YP_002961796.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
 gi|240007293|gb|ACS38519.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1]
          Length = 451

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 174/413 (42%), Positives = 239/413 (57%), Gaps = 9/413 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDF--VVHQGKN---SDNLGQVIRINLDIVYICPVG 76
             G +++I  +   V      + LG    VV +G     S    +VI    D     P G
Sbjct: 25  TFGRVTAIRGLLVEVAGPVSAMRLGGRIDVVVEGAGVAASTVPCEVIGFAGDRALAMPFG 84

Query: 77  IGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
             E +  G   LV       I PSA W GR ++ALG+PIDG   L +G     + +  PP
Sbjct: 85  SLEGVRRGCPALVRDEAAGAIRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPP 144

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
           A  R+RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I L
Sbjct: 145 AHGRRRVGPPLDLGVRCINTFLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGL 204

Query: 195 VGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREV+EF++D LG   L  SVVVVATSDE  ++R+ A    + +AEYF  +G  VL
Sbjct: 205 VGERGREVQEFLQDDLGAAGLAHSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVL 264

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
            ++DSITRFA + R+I    GE P A+GY  +VFSELPRLLER GP    +G I+ + +V
Sbjct: 265 CMIDSITRFAMAQRDIGLAGGEPPTAKGYTPTVFSELPRLLERAGPGVG-EGAISGLFTV 323

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+HN+P+AD+VR ILDGHIV+ R +AE+GRYP ++ L SVSR   +A        V
Sbjct: 324 LVEGDDHNEPVADAVRGILDGHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTV 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                ++  + +  ++  +G YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 384 RRARKVLATYADMEELIRLGAYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 436


>gi|190571573|ref|YP_001975931.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018975|ref|ZP_03334782.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|226739955|sp|B3CN53|ATPA_WOLPP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190357845|emb|CAQ55301.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995084|gb|EEB55725.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 513

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 105/429 (24%), Positives = 190/429 (44%), Gaps = 23/429 (5%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E +   +  +  G + S+T     V  L +    G+ V      S   G V+ ++
Sbjct: 14  IKEKVETFDNPIKRENIGEVISVTDGITLVYGLEK-AKFGEKVSFA---SGVEGIVLDLD 69

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D   I  +G   ++  GD+V   G   ++       GRV+NALG PID    + +    
Sbjct: 70  HDTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGDPIDDGGEI-RAKNK 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-------- 177
           M I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+        
Sbjct: 129 MYIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIAIDTIINQ 188

Query: 178 --LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
             ++     +     +   +G++   V + +         + + VVVA++ +   ++ +A
Sbjct: 189 KKINDEVNENQKIYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDCAPMQFLA 248

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T  TI E+F   G + L++ D +++ A + R+++      P    YP  +F    RLL
Sbjct: 249 PYTGCTIGEFFRDNGMHCLVVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIFYVHSRLL 308

Query: 295 ERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      EKG    TA+  +     + +  +  +V SI DG I L   L  +G  P V+
Sbjct: 309 ERAAKMSDEKGQGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESELFHKGFRPAVN 368

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  S+   + ++ E  D      +   +D  +  ++++   
Sbjct: 369 IGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFA---KFGSDLDATVQLSLNKGKY 425

Query: 413 IYDFLKQSP 421
           + + LKQ  
Sbjct: 426 LIELLKQKQ 434


>gi|203287748|ref|YP_002222763.1| flagellum-specific ATP synthase [Borrelia recurrentis A1]
 gi|201084968|gb|ACH94542.1| flagellum-specific ATP synthase [Borrelia recurrentis A1]
          Length = 436

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 154/441 (34%), Positives = 251/441 (56%), Gaps = 13/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           M    E  + + +D   + +   G +  I  +      L     +GD   + Q       
Sbjct: 2   MDNFFEGYSNILDDI--HTISFIGRVKKIKGLLL--ESLGPKCGIGDLCLIEQSCGKKIY 57

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +      + I +GD V+    + +I+ S    GRVI++LG+PID    
Sbjct: 58  AEVLGFNGSCVSLMAYEGFDGIKVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGP 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              G+   E+       ++R    +   TG+RV+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 118 FF-GNNYKELSFSSINPLDRGVFTEQIVTGVRVLDGFLPVARGQRVGIFSGAGVGKSTLL 176

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +       +SV++V+TSDESPI R     T
Sbjct: 177 GMIAKNSKADVNVIAFIGERGRELNEFIKYELGNGCFNRSVLIVSTSDESPISRYKGAYT 236

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  +AE+F   G +V+L+ DSITRFA++ REI+ + GE P  +GYP SVF E+P LLER 
Sbjct: 237 ATLVAEHFRDCGMDVMLLFDSITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERS 296

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G + K  G+IT   +VLV+GD+ ++PI+D+++++LDGHI+L+R L+++G YP V+ L S 
Sbjct: 297 GLNAK--GSITGFYTVLVEGDDFSEPISDNMKAVLDGHIILDRDLSDKGIYPSVNILNST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  + +++KL+S + +L+  ++   D+   G Y  G +  +D A+ + P I DFL
Sbjct: 355 SRSLHRIVNFEKQKLISKIRNLLSIYKSYEDLIKTGIYVKGSNKEVDLAIAKYPKIIDFL 414

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
            Q   +   E  F+ +  +++
Sbjct: 415 SQGMQE---ECDFENLDNEMR 432


>gi|16272428|ref|NP_438641.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae Rd KW20]
 gi|229844358|ref|ZP_04464498.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 6P18H1]
 gi|260580455|ref|ZP_05848283.1| ATP synthase F1, alpha subunit [Haemophilus influenzae RdAW]
 gi|1168566|sp|P43714|ATPA_HAEIN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|1573459|gb|AAC22139.1| ATP synthase F1, subunit alpha (atpA) [Haemophilus influenzae Rd
           KW20]
 gi|229812607|gb|EEP48296.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 6P18H1]
 gi|260092797|gb|EEW76732.1| ATP synthase F1, alpha subunit [Haemophilus influenzae RdAW]
          Length = 513

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 102/444 (22%), Positives = 184/444 (41%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQF 436


>gi|164685570|gb|ABY66731.1| atp1 [Begonia sp. TJB 346]
          Length = 413

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|300811332|ref|ZP_07091829.1| ATP synthase F1, alpha subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497696|gb|EFK32721.1| ATP synthase F1, alpha subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 503

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +   + +          G    
Sbjct: 10  SLIKQQLEHYDDKLDIEEVGVVTYVGDGIARAHGLNNVLS-SELLQFDNG---AYGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGKFDDIREGDRVKRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+   + ++ 
Sbjct: 125 KTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP +   
Sbjct: 185 NQKGQDVICIYVSIGQKESTVRAQVETLKKFGAMDYTIVVEAGPSEPAPMLYIAPYSGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 305 SKELGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFSGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG---SDLDQATQAKLARGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|227113925|ref|ZP_03827581.1| F0F1 ATP synthase subunit alpha [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227327858|ref|ZP_03831882.1| F0F1 ATP synthase subunit alpha [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|253690615|ref|YP_003019805.1| ATP synthase F1, alpha subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|261823736|ref|YP_003261842.1| F0F1 ATP synthase subunit alpha [Pectobacterium wasabiae WPP163]
 gi|259585432|sp|C6DJH0|ATPA_PECCP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|251757193|gb|ACT15269.1| ATP synthase F1, alpha subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|261607749|gb|ACX90235.1| ATP synthase F1, alpha subunit [Pectobacterium wasabiae WPP163]
          Length = 513

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGALD-HDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +         + ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALENTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|15594633|ref|NP_212422.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31]
 gi|221217707|ref|ZP_03589175.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 72a]
 gi|223888865|ref|ZP_03623456.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 64b]
 gi|224533156|ref|ZP_03673756.1| flagellar protein export ATPase FliI [Borrelia burgdorferi WI91-23]
 gi|224533724|ref|ZP_03674312.1| flagellar protein export ATPase FliI [Borrelia burgdorferi
           CA-11.2a]
 gi|225549175|ref|ZP_03770150.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 94a]
 gi|225550200|ref|ZP_03771160.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 118a]
 gi|226320589|ref|ZP_03796149.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 29805]
 gi|1706850|sp|P52607|FLII_BORBU RecName: Full=Flagellum-specific ATP synthase
 gi|1165272|gb|AAA85611.1| FliI [Borrelia burgdorferi]
 gi|2688178|gb|AAC66660.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31]
 gi|221192384|gb|EEE18603.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 72a]
 gi|223885681|gb|EEF56780.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 64b]
 gi|224511883|gb|EEF82284.1| flagellar protein export ATPase FliI [Borrelia burgdorferi WI91-23]
 gi|224513017|gb|EEF83380.1| flagellar protein export ATPase FliI [Borrelia burgdorferi
           CA-11.2a]
 gi|225369312|gb|EEG98765.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 118a]
 gi|225370401|gb|EEG99839.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 94a]
 gi|226234008|gb|EEH32729.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 29805]
 gi|312147904|gb|ADQ30563.1| flagellar protein export ATPase FliI [Borrelia burgdorferi JD1]
 gi|312148976|gb|ADQ29047.1| flagellar protein export ATPase FliI [Borrelia burgdorferi N40]
          Length = 436

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 159/440 (36%), Positives = 250/440 (56%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     V   G +  I  +   V  L     +GD  +   +N   + 
Sbjct: 1   MSNFFENYLRQVDDIET--VSFVGRVQKIKGLL--VESLGPQCAIGDLCLIDQRNGKKVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    I  K+ P +NR   E    TG++V+D F P+  GQR+G+F+GSG+GKSTLL
Sbjct: 117 FLNNSYKELIFEKINP-INRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V L+ DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  S +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I +F+
Sbjct: 355 SRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  ++    +  ++  K++
Sbjct: 415 SQGINETFDFENLEDEIKEI 434


>gi|310795840|gb|EFQ31301.1| ATP synthase F1 [Glomerella graminicola M1.001]
          Length = 567

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 98/427 (22%), Positives = 173/427 (40%), Gaps = 34/427 (7%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 71  AETGRVLSVGDGIARVHGMA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 126

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRVI+ALG PIDG   +   +       K P  + RQ
Sbjct: 127 VREGETVKRTGEIVDVPVGPELLGRVIDALGNPIDGKGPINAKEKRRA-QLKAPGILPRQ 185

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG++ +D   P+  GQR  +      GK       +L+    +   D      
Sbjct: 186 SVRQPVQTGLKSVDAMVPVGRGQRELIIGDRQTGKTAVALDAILNQKRWNSGNDETKKLY 245

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAE----- 243
            +   VG++   V + ++    ++  K S+VV AT+ E+  L+ +AP T     +     
Sbjct: 246 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGDHYLQQFANL 305

Query: 244 -------YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
                  +F   G + L+I D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 306 LLASIGEWFRDNGKHSLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 365

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +   G + +  I  +V SI DG I L   L  +G  P ++  
Sbjct: 366 AAKMNDKLGGGSMTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVG 425

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  SL   + ++ E   +     +   +D    + + +   + 
Sbjct: 426 LSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQTLSRGERLT 482

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 483 ELLKQKQ 489


>gi|294508647|ref|YP_003572706.1| flagellum-specific ATP synthase [Salinibacter ruber M8]
 gi|294344976|emb|CBH25754.1| Flagellum-specific ATP synthase [Salinibacter ruber M8]
          Length = 448

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 164/428 (38%), Positives = 232/428 (54%), Gaps = 11/428 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDIVY 71
           +     + G ++S+  +    + L     +G+         G+      +V+ +      
Sbjct: 20  TTVPARRYGRVTSVVGLLVEASELD--AAVGEMCRIHVAEGGETRTVRAEVVGVKESTTV 77

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+     +  G L+        +       GRVI+A G+PIDG   LG  D    I  
Sbjct: 78  LMPMEQTHGLQAGCLIRPADEGMSVPVGPDLLGRVIDAGGRPIDGKGPLG-TDAREPIHR 136

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++R  ++    TGIR ID F  +  GQR G+FAGSG+GKSTLL M AR    D  
Sbjct: 137 DPPSPLDRPLIDTPLSTGIRSIDAFLKMGKGQRTGIFAGSGVGKSTLLGMIARRAEADVN 196

Query: 191 IISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGREVREFI D    + L++SV+V  T DE+ + R  A   A+ IAE+F  +G
Sbjct: 197 VIALIGERGREVREFIVDNLGEEGLRRSVLVAVTGDEAAMSRVKAASAAMAIAEHFRDRG 256

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITR A + REI    GE P  RGYP SVF+ LPRLLER GP+E   G IT 
Sbjct: 257 QDVLLMMDSITRVAQAQREIGLAVGEPPTRRGYPPSVFALLPRLLERAGPAE--AGTITG 314

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ ++PI+D+ R ILDGHIVL+R LAE G YP VD L SVSR+  +  S + 
Sbjct: 315 IFTVLVEGDDMSEPISDAARGILDGHIVLSRELAEAGHYPAVDVLQSVSRVMPRVASLEA 374

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           +        L+  +EE  D+  +G Y  G D   D+AV   P + DFL+Q       +  
Sbjct: 375 EAAAQEARELLSAYEEVEDLISVGAYEEGSDPETDRAVEAYPALADFLQQPVDAPPPDPA 434

Query: 430 FQEITKKL 437
                ++L
Sbjct: 435 PSTQLRQL 442


>gi|169351553|ref|ZP_02868491.1| hypothetical protein CLOSPI_02333 [Clostridium spiroforme DSM 1552]
 gi|169291775|gb|EDS73908.1| hypothetical protein CLOSPI_02333 [Clostridium spiroforme DSM 1552]
          Length = 510

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 101/432 (23%), Positives = 180/432 (41%), Gaps = 20/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++   ++ E          G + ++      +  L     LG+ +       D  G
Sbjct: 15  IKEQIKHFDEVIEQKD------VGTVMTVGDGVSVIHGLDD-AMLGELLAFPN---DVYG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
            V+ ++ D V    +G    I  GD V   G+   +       GRV+N LG+ IDG+  +
Sbjct: 65  MVMNLDEDSVGAVLLGSESTIKEGDEVKRTGKIMEVPVGDEMLGRVVNPLGQAIDGNGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +  I       M R+ V++  +TGI  ID   P+  GQR  +      GK+ +  
Sbjct: 125 ITS-HTRPIERVASGVMTRKSVDQPLQTGITSIDAIIPIGRGQRELIIGDRQTGKTAIAI 183

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   V + +E    G  ++ + VV A++ E   ++ +AP 
Sbjct: 184 DTILNQKGQNIYCIYVAIGQKNSTVAQIVEKLRQGGAMEYTTVVCASASELAPVQYIAPY 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAE +  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER
Sbjct: 244 AGCAIAEEWLEQGKDVLIVYDDLSKHAVAYRTVSLLLKRPPGREAYPGDVFYLHSRLLER 303

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +E   G+ITA+  +     + +  I  +V SI DG I L + L   G  P +D  
Sbjct: 304 ACRLNEENGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLQQELFNAGFRPAIDTG 363

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  SL   + ++ E +       +   +D      +     + 
Sbjct: 364 LSVSRVGSSAQIKAMKQVSGSLKLELAQYAEMQ---AFAQFGSDLDAATKATLDHGAKVR 420

Query: 415 DFLKQSPSDLSS 426
           + LKQ+     S
Sbjct: 421 EVLKQAQYSPRS 432


>gi|116517209|ref|YP_816799.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae D39]
 gi|122277703|sp|Q04HT7|ATPA_STRP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116077785|gb|ABJ55505.1| ATP synthase F1, alpha subunit [Streptococcus pneumoniae D39]
          Length = 501

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 15/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + Q  E++  N  V + G ++ I         L + V  G+ +  +  +    G
Sbjct: 6   QEISALIKQQIENFKPNFDVTETGVVTYIGDGIARAHGL-ENVMSGELLNFENGS---YG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    V I  +G   +I  GD +   G+   +       GRV++ LG+P+DG   +
Sbjct: 62  MAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGRVVDPLGRPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK+T+  
Sbjct: 122 -HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTTIAI 180

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVTASASQPSPLLFLAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F  +G +VL++ D +++ A + RE+       P    +P  VF    RLLER
Sbjct: 241 AGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELLLLLRRPPGREAFPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L   L   G  P +D  
Sbjct: 301 SAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLGDGLFNAGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDLDAATQAKLNRGRRTV 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
           + LKQ        +    I   L
Sbjct: 418 EVLKQPVHKPLPVEKQVTILYAL 440


>gi|50123430|ref|YP_052597.1| F0F1 ATP synthase subunit alpha [Pectobacterium atrosepticum
           SCRI1043]
 gi|81692999|sp|Q6CYJ3|ATPA_ERWCT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49613956|emb|CAG77409.1| ATP synthase alpha chain [Pectobacterium atrosepticum SCRI1043]
          Length = 513

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGALD-HDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +         + ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALENTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|6561699|gb|AAF17043.1|AF197711_1 ATPase alpha subunit [Amborella trichopoda]
          Length = 422

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 96/413 (23%), Positives = 171/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V     G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGKKVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHEQRR-VEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDK------VI 191
           +  +TG++ +D   P+  GQR  +      GK      T+L+    +    K       +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKAIKESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVSKQPQ 405


>gi|253573521|ref|ZP_04850864.1| flagellar protein export ATPase FliI [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251847049|gb|EES75054.1| flagellar protein export ATPase FliI [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 439

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 160/422 (37%), Positives = 247/422 (58%), Gaps = 9/422 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYI 72
              + +   G ++ +  +   V        +GD   ++  K +  L  +V+    + V +
Sbjct: 14  RQLDPIRINGKVTQVIGLM--VESEGPDASIGDLCYIYPSKAAQPLQAEVVGFRDNKVLL 71

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P+G  + I  G  V   G+   +   +   G+V++ LG+P+DG   L          +K
Sbjct: 72  MPLGELQSIGPGCDVVGTGKPLTVQVGSELLGKVLDGLGQPLDGS-LLPSRMGHYSTYNK 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               +NR RV +    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +
Sbjct: 131 PMNPLNRPRVSEPIGIGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMIARNTSADVNV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+LVGERGREV +FI  D   + L++SVVVVATSD+  ++R    L A TIAEYF  +G 
Sbjct: 191 IALVGERGREVLDFIERDLGPEGLERSVVVVATSDQPALIRMKGALIATTIAEYFRDRGL 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NV+L++DS+TR+A ++RE+    GE P  RGY  SVF+ LP+L+ER G      G+ITA 
Sbjct: 251 NVMLMMDSVTRYAMALREVGLAVGEPPAMRGYTPSVFAALPKLMERAGTGPT--GSITAF 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A +G +P +D LAS+SR+     S ++ 
Sbjct: 309 YTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANKGHFPAIDILASISRVMKDIVSDEQN 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +   +L  L+  ++++ D+  IG Y+PG +  +D+A+  +  I++F KQ  ++  +    
Sbjct: 369 EAAENLKRLMAVYKDSEDLINIGAYQPGSNPDIDEAIGAIQQIWNFTKQKVNEKVTLAEV 428

Query: 431 QE 432
           QE
Sbjct: 429 QE 430


>gi|325924761|ref|ZP_08186198.1| proton translocating ATP synthase, F1 alpha subunit [Xanthomonas
           perforans 91-118]
 gi|325544853|gb|EGD16199.1| proton translocating ATP synthase, F1 alpha subunit [Xanthomonas
           perforans 91-118]
          Length = 515

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYESLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|219685772|ref|ZP_03540583.1| flagellar protein export ATPase FliI [Borrelia garinii Far04]
 gi|219672711|gb|EED29739.1| flagellar protein export ATPase FliI [Borrelia garinii Far04]
          Length = 436

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 156/440 (35%), Positives = 253/440 (57%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     +   G +  I  +   V  L     +GD  +   +N+  + 
Sbjct: 1   MSNFFENYLKQVDDIET--ISFVGRVQKIKGLL--VESLGPQCAVGDLCLIDQRNNKRVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             K         K+ P +NR   E+   TG++V+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 117 FLKNRYKELTFEKINP-INRSIFEEQILTGVKVLDGFLPVAKGQRVGIFSGAGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V L+ DSITRFA++ RE++ + GE PV++GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFRDQGKDVALLFDSITRFANAKREMSLSLGEPPVSKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINILSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR  ++  S +++KL+    +L+  ++   D+   G Y  G +  +D A+ + P I DF+
Sbjct: 355 SRSINRIMSLEKQKLIMKARNLLSIYKNYEDLIRAGIYIKGSNKDVDFAISKYPKIIDFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  +++   +  ++  +++
Sbjct: 415 SQGINEIFDFENLEDEIREI 434


>gi|148245076|ref|YP_001219770.1| F0F1-type ATP synthase alpha subunit [Candidatus Vesicomyosocius
           okutanii HA]
 gi|158514263|sp|A5CVI8|ATPA_VESOH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146326903|dbj|BAF62046.1| F0F1-type ATP synthase alpha subunit [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 513

 Score =  299 bits (765), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 103/448 (22%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G + S++     +  L   V  G+ +     +
Sbjct: 1   MQLNAHEISDLIKKQIEGFDFTAEARTEGSVVSVSDGIVRIHGLGD-VQFGEMIEF---S 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           ++  G  + +  D V    +G    I  GD+V    R   +       GRV+N LGK ID
Sbjct: 57  NNTFGMALNLEQDSVGAVILGDYLHILEGDIVKCTNRLVEVPVGEAMLGRVVNPLGKAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    +   +    P  ++R+ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGDIDAQGVR-PLEVMAPGVIDRKSVDQPIQTGIKAIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   + +   +G++   V   +           +++VVA +  SP L+
Sbjct: 176 TAVAIDAIINQRDSGIRCVYVAIGQKDSSVATVVRKLEEYGALANTIIVVAGAAVSPALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     +AEYF  +G++VL++ D +T+ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGCAMAEYFRDRGEDVLIVYDDLTKQAWAYREVSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVEKMTNGKVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINVGLSVSRVGGAAQTNIIKKLGGGIRLDLAQYRE---LVAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D+     + +   + + +KQ+     S
Sbjct: 413 LDVETKAQIDRGQRVTELMKQNQYSPLS 440


>gi|34539373|gb|AAQ74570.1| F1-ATPase alpha subunit [Musa textilis]
          Length = 415

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 165/410 (40%), Gaps = 21/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L+  +  G+ V          G    +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLND-IQAGEMVEFA---VGVKGIAFNLENNNVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPVGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRLTSDTLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALAYSILVAATASDPAPLQFIAPYSGCAMGEYFLDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 402


>gi|258404705|ref|YP_003197447.1| flagellar protein export ATPase FliI [Desulfohalobium retbaense DSM
           5692]
 gi|257796932|gb|ACV67869.1| flagellar protein export ATPase FliI [Desulfohalobium retbaense DSM
           5692]
          Length = 435

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 241/417 (57%), Gaps = 8/417 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G +++I  V   V      V +G       +G  S    +V+     +  + P+G    +
Sbjct: 20  GKVTNIVGVL--VQGYCPNVSVGSLCEIVPEGGESPVQAEVVGFRDAMALLMPLGELRGL 77

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G+L+        +       GRV++A+G PIDG   L      M I ++ P  M R +
Sbjct: 78  APGNLIKVLDSSATLPVGEDMLGRVLDAMGYPIDGKGPLSLPRSRM-IYAQPPGPMERAQ 136

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +      G+  I+       GQR+ + AGSG+GKSTL+ M AR       +I+L+GERGR
Sbjct: 137 ISVPLDVGVSSINGLLTCGLGQRLAIMAGSGVGKSTLMGMIARDSKASINVIALIGERGR 196

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREFI  D   + LK+SVV+VATSD+SP+LR      A  +AE+F+ +G++V+LI+DS+
Sbjct: 197 EVREFIENDLGPEGLKRSVVIVATSDQSPVLRMRGAFAATAVAEHFADQGEDVMLIMDSV 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + REI    GE P  +GYP SVF++LP+ LER G  +K  G+IT + +VLV+GD+
Sbjct: 257 TRYAMANREIGLAVGEPPTTKGYPPSVFAKLPKFLERAGNFKK-GGSITGLYTVLVEGDD 315

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+P+AD+VRSILDGHIVL+R LA +  YPP+D L S SRL  +    +  +  + + ++
Sbjct: 316 MNEPVADTVRSILDGHIVLDRRLANKNHYPPIDVLQSASRLMRQVVDEEHLQYSAQIQNV 375

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
           +  + E+ D+  IG Y PG +  LD A++++  + +FL Q   +  S +  + + ++
Sbjct: 376 LATYRESEDLVTIGAYTPGTNRALDDALNRIESVNEFLTQDKDEHVSLEETRAVMQQ 432


>gi|27365283|ref|NP_760811.1| flagellum-specific ATP synthase [Vibrio vulnificus CMCP6]
 gi|320155667|ref|YP_004188046.1| flagellum-specific ATP synthase FliI [Vibrio vulnificus MO6-24/O]
 gi|27361430|gb|AAO10338.1| flagellar protein export ATPase FliI [Vibrio vulnificus CMCP6]
 gi|319930979|gb|ADV85843.1| flagellum-specific ATP synthase FliI [Vibrio vulnificus MO6-24/O]
          Length = 441

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 147/432 (34%), Positives = 232/432 (53%), Gaps = 5/432 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L         +  V  G +  +  +    T       +G   + +        +V+  
Sbjct: 7   ERLKSYRVQGLGSRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMTGQMEAEVVGF 64

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + D +++ P      I  G  V        +       GRVI+ +G P+DG   +   + 
Sbjct: 65  SGDNLFLMPSEQIGGILPGAKVTPLTSESGLPVGMELLGRVIDGVGNPLDGLGPIY-TEH 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 124 RASFNAEPINPLARKPITEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRG 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFIE+ LG D  K+SVVV A +D SP++R     TA+TIAE
Sbjct: 184 TTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVAAPADASPLMRLKGCQTALTIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G    +
Sbjct: 244 YFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPQ 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+  +
Sbjct: 304 QGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQ 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+Q   +
Sbjct: 364 ITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPAIDSAFTLKPKLDEYLQQRMKE 423

Query: 424 LSSEDVFQEITK 435
                +   + K
Sbjct: 424 TVPYAMCVNMLK 435


>gi|325954831|ref|YP_004238491.1| ATP synthase subunit alpha [Weeksella virosa DSM 16922]
 gi|323437449|gb|ADX67913.1| ATP synthase subunit alpha [Weeksella virosa DSM 16922]
          Length = 525

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 107/451 (23%), Positives = 172/451 (38%), Gaps = 42/451 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ L +L    E      + + G + S+      V  L      G+ V     +    G
Sbjct: 13  LKQQLSSLDSTVE------LAEVGTVLSVGDGIARVYGL-DNAQYGELVEFANGSE---G 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V  +  D V I   G    I  GD V    R   I+      GRV++ LG PIDG   +
Sbjct: 63  MVQNLEEDNVGIVLFGPSTAIKEGDTVKRTNRIASINVGEGMLGRVVDMLGNPIDGKGPI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M I  K P  + RQ V +  +TGI  ID   P+  GQR  +      GK+++  
Sbjct: 123 EGQLYEMPIERKAPGVIYRQPVNEPLQTGIVSIDSMIPIGRGQRELIIGDRQTGKTSVAL 182

Query: 180 MFARSDCFDK-------VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
               +             I   VG++G  V   ++        K +V+V A + +   ++
Sbjct: 183 DAILNQKEFYDRGEPVFCIYVAVGQKGSTVAGIMKTLQEHGADKYTVIVAANASDPAPMQ 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP+    I E+F   G   L++ D +T+ A + RE++      P    YP  VF    
Sbjct: 243 VYAPMAGAAIGEFFRDSGRPALIVYDDLTKQAVAYREVSLLLRRPPGREAYPGDVFYLHS 302

Query: 292 RLLERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER     K+                     G++TA+  +     + +  I  +V SI
Sbjct: 303 RLLERAAKIIKDDTIAAQMNDLPESMRPIVKGGGSLTALPIIETQAGDVSAYIPTNVISI 362

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A +   KK+  +L     ++ E      
Sbjct: 363 TDGQIFLESDLFNSGIRPAINVGISVSRVGGSAQTKPMKKVSGTLKLDQAQYRELE---A 419

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              +   +D      + +     + LKQ  +
Sbjct: 420 FAKFGSDLDAATMGVIGKGERNVELLKQGVN 450


>gi|317494641|ref|ZP_07953053.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917243|gb|EFV38590.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 513

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAVDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                     G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAYTKGEVKGATGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K ++    + + LKQ  
Sbjct: 413 LDDATRKQLNHGQKVTELLKQKQ 435


>gi|217425420|ref|ZP_03456914.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
 gi|217391671|gb|EEC31699.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 576]
          Length = 449

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 240/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 11  EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG+P+DG   
Sbjct: 69  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 129 LV-SETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 308 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 366 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 425

Query: 418 KQSPSDL-SSEDVFQEI 433
            Q   D  ++ED    +
Sbjct: 426 SQRTDDYAAAEDTIARL 442


>gi|218528814|ref|YP_002419630.1| flagellum-specific ATP synthase [Methylobacterium chloromethanicum
           CM4]
 gi|218521117|gb|ACK81702.1| ATPase FliI/YscN [Methylobacterium chloromethanicum CM4]
          Length = 451

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 174/413 (42%), Positives = 240/413 (58%), Gaps = 9/413 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDF--VVHQGKN---SDNLGQVIRINLDIVYICPVG 76
             G +++I  +   V      + LG    VV +G     S    +VI    D     P G
Sbjct: 25  TFGRVTAIRGLLVEVAGPVSAMRLGGRIDVVVEGAGVAASTVPCEVIGFAGDRALAMPFG 84

Query: 77  IGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
             E +  G   LV       I PSA W GR ++ALG+PIDG   L +G     + +  PP
Sbjct: 85  SLEGVRRGCPALVRDEAAGAIRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPP 144

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
           A  R+RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I L
Sbjct: 145 AHGRRRVGPPLDLGVRCINTFLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGL 204

Query: 195 VGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREV+EF++D LG   L +SVVVVATSDE  ++R+ A    + +AEYF  +G  VL
Sbjct: 205 VGERGREVQEFLQDDLGAAGLARSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVL 264

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
            ++DSITRFA + R+I    GE P A+GY  +VFSELPRLLER GP    +G I+ + +V
Sbjct: 265 CMIDSITRFAMAQRDIGLAGGEPPTAKGYTPTVFSELPRLLERAGPGVG-EGAISGLFTV 323

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+HN+P+AD+VR ILDGHIV+ R +AE+GRYP ++ L SVSR   +A        V
Sbjct: 324 LVEGDDHNEPVADAVRGILDGHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTV 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                ++  + +  ++  +G YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 384 RRARKVLATYADMEELIRLGAYRAGSAPEVDEAVALMPDLTAFLGQGKEEATS 436


>gi|87043021|ref|YP_492635.1| ATP synthase F0 subunit 1 [Dictyostelium citrinum]
 gi|122110182|sp|Q2LCQ7|ATPAM_DICCI RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|84682121|gb|ABC60386.1| ATPase subunit 1 [Dictyostelium citrinum]
          Length = 519

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 189/422 (44%), Gaps = 16/422 (3%)

Query: 8   LAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           +  +A+ Y+ N V    G +  I      V+ LSQ + +G+ V   GKN    G  + + 
Sbjct: 27  INAVAKKYTLNNVSNKYGKVLFIKDGVVKVSGLSQ-IKIGEKVEFVGKN--LFGMALNLE 83

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V I   G    I  G +V    + F I       GRV++ LG+PIDG   L     +
Sbjct: 84  ATSVGIVIFGEDTAIYEGVIVKRCEQNFAIKVDKTMLGRVVDVLGQPIDGLGELKDTKTT 143

Query: 126 M--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  + R+ V +   TG++++D   P+  GQR  +      GKS +      
Sbjct: 144 RVMSVERKAPGIVTRKSVHESMLTGVKMVDALLPIGRGQRELIIGDRQTGKSAIAVDAIL 203

Query: 184 SDCFDK---VIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +   +K    I   VG++   VR  +E       L+ ++VVV+T+ ++  L+ +AP T  
Sbjct: 204 NQQVNKDIVCIYVAVGQKKSTVRRLVEMLNTKGALEYTIVVVSTASDAAPLQFLAPYTGC 263

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TI EYF  +G + L++ D +++ A + R+++      P    YP  VF    RLLER   
Sbjct: 264 TIGEYFRDEGKHALIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAK 323

Query: 300 SEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             ++ G    TA   V     + +  I  ++ SI DG I L + L  +G  P V+   SV
Sbjct: 324 LNEKYGCGSLTAFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGLSV 383

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A SA  KKL  +L   + ++ E         +    D +  + + +  +  + L
Sbjct: 384 SRVGSAAQSAVMKKLAGALKLELAQYREL---ARFEQFSSNADAVTTQILKKGKLTIELL 440

Query: 418 KQ 419
           KQ
Sbjct: 441 KQ 442


>gi|83649675|ref|YP_438110.1| F0F1 ATP synthase subunit alpha [Hahella chejuensis KCTC 2396]
 gi|115312230|sp|Q2S6N9|ATPA2_HAHCH RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|83637718|gb|ABC33685.1| ATP synthase F1, alpha subunit [Hahella chejuensis KCTC 2396]
          Length = 514

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G I S++     +  L+  V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKKRIEKLDISSEAKTEGTIVSVSDGIVLIHGLAD-VMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  ++++ G  V   GR   +       GRV++ LG PIDG
Sbjct: 60  -VYGLALNLERDSVGAVVLGDYKDLAEGQKVRVTGRILEVPVGEQLLGRVVDGLGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             +L +  L+  +    P  + R+ V +  +TG + +D   P+  GQR  V      GK+
Sbjct: 119 KGAL-ETTLTEPVEKVAPGVIARKSVGQPMQTGYKSVDTMVPIGRGQRELVIGDRQTGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            L      +      K I   +G++   +   +           ++VV A + +   ++ 
Sbjct: 178 ALAIDAIINQKGTGIKCIYVAIGQKQSSIANVVRKLEEHGAMDHTIVVAAGAADPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNEEYVEKYTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   +
Sbjct: 358 TSLFNAGIRPAMNAGISVSRVGGAAQTKIMKKLGGGIRLALAQYREL---AAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D    K +     + + +KQ   
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQF 437


>gi|21244376|ref|NP_643958.1| F0F1 ATP synthase subunit alpha [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|78049325|ref|YP_365500.1| F0F1 ATP synthase subunit alpha [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|294667263|ref|ZP_06732483.1| ATP synthase subunit A [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|81799206|sp|Q8PGG5|ATPA_XANAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116237315|sp|Q3BP13|ATPA_XANC5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|21110034|gb|AAM38494.1| ATP synthase alpha chain [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78037755|emb|CAJ25500.1| ATP synthase alpha chain [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|292602935|gb|EFF46366.1| ATP synthase subunit A [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 515

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYESLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|313123405|ref|YP_004033664.1| ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279968|gb|ADQ60687.1| ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 503

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 177/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +   + +          G    
Sbjct: 10  SLIKQQLEHYDDKLDIEEVGVVTYVGDGIARAHGLNNVLS-SELLQFDNG---AYGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGKFDDIREGDRVKRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+   + ++ 
Sbjct: 125 KTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP +   
Sbjct: 185 NQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVEAGPSEPAPMLYIAPYSGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 305 SKELGGGSLTALPFIQTEAGDISAYIPTNVISITDGQIFLQSDLFFSGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG---SDLDQATQAKLARGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|57868890|gb|AAW57441.1| ATP synthase alpha subunit [Fouquieria columnaris]
 gi|57868892|gb|AAW57442.1| ATP synthase alpha subunit [Fouquieria fasciculata]
          Length = 398

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 168/406 (41%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGRAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 398


>gi|167577319|ref|ZP_02370193.1| type III secretion system ATPase [Burkholderia thailandensis TXDOH]
          Length = 442

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 165/444 (37%), Positives = 243/444 (54%), Gaps = 14/444 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
             L  L+++A+  +  L ++      G +  +      V  L     LG+    +  +  
Sbjct: 2   NALTDLSRVADAMAARLAIEPAIGMTGKVLEVIGTLVRVVGLE--ATLGELCELRSASGA 59

Query: 58  NL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +   +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PID
Sbjct: 60  LIQHAEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GK
Sbjct: 120 GRGELDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGK 178

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKM 233
           STLL MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  
Sbjct: 179 STLLGMFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAK 238

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRL
Sbjct: 239 AAYAATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRL 298

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           LER G  E  +G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D 
Sbjct: 299 LERTGMGE--RGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDV 356

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I
Sbjct: 357 LGSLSRIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRI 416

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q   + S  D       +L
Sbjct: 417 RAFLNQRTDEYSPPDATLAALHEL 440


>gi|6561658|gb|AAF17002.1|AF197670_1 ATPase alpha subunit [Thottea tomentosa]
          Length = 419

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 93/415 (22%), Positives = 170/415 (40%), Gaps = 23/415 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           K++  S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 356 KQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 407


>gi|55976870|gb|AAV68284.1| F1-ATPase alpha subunit [Abutilon x hybridum]
          Length = 410

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 168/408 (41%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVC 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            SL   + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 GSLKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|34539157|gb|AAQ74462.1| F1-ATPase alpha subunit [Acanthochlamys bracteata]
          Length = 415

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 169/407 (41%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGEGIARVYGXNE-IQAGEXVEFA---SGVKGIALNLENENVGIVVXGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|6561688|gb|AAF17032.1|AF197700_1 ATPase alpha subunit [Cananga odorata]
          Length = 421

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 169/416 (40%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGASESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 409


>gi|300696963|ref|YP_003747624.1| FliI: flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum CFBP2957]
 gi|299073687|emb|CBJ53207.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum CFBP2957]
          Length = 481

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 154/426 (36%), Positives = 224/426 (52%), Gaps = 23/426 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV  G ++ +  +      L   V     V         L +V+    +  ++ P     
Sbjct: 41  VVSCGKLTRVAGLVMEAVGLKLPVGSACRVELP-HGRHVLAEVVGFAEERAFLMPQTDLV 99

Query: 80  EISLGDLVFHWGRFRIS---------------PSACWCGRVINALGKPIDGDDSLGKGD- 123
            +  G  VF      +                      GRV++A G+P+DG   LG  + 
Sbjct: 100 GVVPGARVFPLEPQHLPLDAADPTIAHSKFLPVGPRLLGRVVDANGEPLDGKGPLGTHEE 159

Query: 124 LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           L+   +S  P   + R+ +E     G+R I+    +  GQR+G+FAGSG+GKS LL M A
Sbjct: 160 LAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMA 219

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D SP++R      A TI
Sbjct: 220 RYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADNSPLMRLQGAAYAHTI 279

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS- 300
           AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G   
Sbjct: 280 AEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAGNGM 339

Query: 301 ---EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAE+G YP +D   S+
Sbjct: 340 VDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSI 399

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+       ++         L  R++  RD+  +G Y  G D + D+A+ + P +  FL
Sbjct: 400 SRVMSAIVQREQLDTARRFKQLYARYQRNRDLIAVGAYARGSDPMTDQAIARYPDMEGFL 459

Query: 418 KQSPSD 423
           +Q   +
Sbjct: 460 QQGMFE 465


>gi|253688955|ref|YP_003018145.1| ATPase, FliI/YscN family [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755533|gb|ACT13609.1| ATPase, FliI/YscN family [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 456

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 158/447 (35%), Positives = 244/447 (54%), Gaps = 20/447 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNL 59
           +L++  +  +D     V + G ++  T +    T L  ++ LG   + + +N     +  
Sbjct: 11  SLDSFEKRIDDTPS--VRRYGRLTRATGLVLEATGL--HMPLGATCLIERQNGSQVEEIE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGR------FRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I+ G  V+   G+       ++       GRV++   KP
Sbjct: 67  SEVVGFNGQKLFLMPLEEVEGITPGARVYARVGQDSSSQGKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E     G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPDTG-YRAPLITPPFNPLQRTPIESVLDVGVRAINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGYHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +
Sbjct: 306 ALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR             V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDPMLDKAIRLYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +  FL+Q   + S+   ++E  + L 
Sbjct: 426 HLEAFLQQGMFEQSN---YEESCQALH 449


>gi|298487101|ref|ZP_07005151.1| type III secretion system ATPase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158344|gb|EFH99414.1| type III secretion system ATPase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 442

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 160/420 (38%), Positives = 228/420 (54%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  V +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG       G     + ++ P   +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    GIR ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E         ++V VVATSD     R  A   A T+AEY   +G NVLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI    GE P  RGYP S FS LPRLLER GP    +G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGP--GPQGSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  +A+   +P +D L S SRL D   +A+ ++L S L  
Sbjct: 322 AAMDPVAEETRSILDGHIVLSAEMAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LI R +E   +  +G Y  G D I D+A+ +   I  FL+Q PS+    D   +   +L+
Sbjct: 382 LIARRQEIELLIQVGEYAVGSDPIADEAIARHSPIEAFLRQPPSE---HDSLAQTLARLR 438


>gi|6561648|gb|AAF16992.1|AF197660_1 ATPase alpha subunit [Podophyllum peltatum]
          Length = 424

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ ++P +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLSPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|20146632|gb|AAM12470.1| ATP synthase alpha subunit [Tetramerista sp. Coode 7925]
          Length = 392

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 92/400 (23%), Positives = 167/400 (41%), Gaps = 23/400 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKASSESDRLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAGAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           L   + ++ E   +     +   +D      +++   + +
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 392


>gi|83816428|ref|YP_446712.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855]
 gi|83757822|gb|ABC45935.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855]
          Length = 442

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 164/428 (38%), Positives = 232/428 (54%), Gaps = 11/428 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDIVY 71
           +     + G ++S+  +    + L     +G+         G+      +V+ +      
Sbjct: 14  TTVPARRYGRVTSVVGLLVEASELD--AAVGEMCRIHVAEGGETRTVRAEVVGVKESTTV 71

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P+     +  G L+        +       GRVI+A G+PIDG   LG  D    I  
Sbjct: 72  LMPMEQTHGLQAGCLIRPADEGMSVPVGPDLLGRVIDAGGRPIDGKGPLG-TDAREPIHR 130

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++R  ++    TGIR ID F  +  GQR G+FAGSG+GKSTLL M AR    D  
Sbjct: 131 DPPSPLDRPLIDTPLSTGIRSIDAFLKMGKGQRTGIFAGSGVGKSTLLGMIARRAEADVN 190

Query: 191 IISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGREVREFI D    + L++SV+V  T DE+ + R  A   A+ IAE+F  +G
Sbjct: 191 VIALIGERGREVREFIVDNLGEEGLRRSVLVAVTGDEAAMSRVKAASAAMAIAEHFRDRG 250

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITR A + REI    GE P  RGYP SVF+ LPRLLER GP+E   G IT 
Sbjct: 251 QDVLLMMDSITRVAQAQREIGLAVGEPPTRRGYPPSVFALLPRLLERAGPAE--AGTITG 308

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLV+GD+ ++PI+D+ R ILDGHIVL+R LAE G YP VD L SVSR+  +  S + 
Sbjct: 309 IFTVLVEGDDMSEPISDAARGILDGHIVLSRELAEAGHYPAVDVLQSVSRVMPRVASLEA 368

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           +        L+  +EE  D+  +G Y  G D   D+AV   P + DFL+Q       +  
Sbjct: 369 EAAAQEARELLSAYEEVEDLISVGAYEEGSDPETDRAVEAYPALADFLQQPVDAPPPDPA 428

Query: 430 FQEITKKL 437
                ++L
Sbjct: 429 PSTQLRQL 436


>gi|227112538|ref|ZP_03826194.1| flagellum-specific ATP synthase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227328355|ref|ZP_03832379.1| flagellum-specific ATP synthase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 456

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 158/447 (35%), Positives = 244/447 (54%), Gaps = 20/447 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNL 59
           +L++  +  +D     V + G ++  T +    T L  ++ LG   + + +N     +  
Sbjct: 11  SLDSFEKRIDDTPS--VRRYGRLTRATGLVLEATGL--HMPLGATCLIERQNGSQVEEIE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGR------FRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I+ G  V+   G+       ++       GRV++   KP
Sbjct: 67  SEVVGFNGQKLFLMPLEEVEGITPGARVYARVGQDSSSQGKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E     G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPDTG-YRAPLITPPFNPLQRTPIESVLDVGVRAINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +
Sbjct: 306 ALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR             V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDPMLDKAIRLYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +  FL+Q   + S+   ++E  + L 
Sbjct: 426 HLEAFLQQGMFEQSN---YEESCQALH 449


>gi|220923531|ref|YP_002498833.1| flagellum-specific ATP synthase [Methylobacterium nodulans ORS
           2060]
 gi|219948138|gb|ACL58530.1| ATPase FliI/YscN [Methylobacterium nodulans ORS 2060]
          Length = 453

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 174/412 (42%), Positives = 243/412 (58%), Gaps = 9/412 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSD--NLGQVIRINLDIVYICPVGI 77
            G + +I  +   V      + LG   D VV  G   +     ++I  +       P G 
Sbjct: 28  FGRVVAIRGLLIEVAGPVAAMRLGGRLDIVVEAGGTREASIPCEIIGFSGAHALAMPFGS 87

Query: 78  GEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
            + +  G    V       I PS  W GRVI+ALG+PIDG   L  G ++  + +  PPA
Sbjct: 88  LQGVRRGCPARVRAENAGAIRPSRAWLGRVIDALGRPIDGLGPLPPGPVAYPLQTDPPPA 147

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R+RV      G+R I+ F  LC GQR+G+FAGSG+GKS LLSM ARS   D  +I LV
Sbjct: 148 HARRRVGPPLDLGVRCINTFLTLCRGQRMGIFAGSGVGKSVLLSMLARSAASDVAVIGLV 207

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EF++D LG + L +SVVVVATSDE  ++R+ A    + +AE+F  +G  VL 
Sbjct: 208 GERGREVQEFLQDDLGPEGLARSVVVVATSDEPALMRRNAAYATLALAEHFRDEGAQVLC 267

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DSITRFA + R++   +GE P A+GY  +VFSELPRLLER GP    +G I+ + +VL
Sbjct: 268 MIDSITRFAMAQRDVGLAAGEPPTAKGYTPTVFSELPRLLERAGPGTG-EGMISGLFTVL 326

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+HN+P+AD+VR ILDGHIV+ R +AE GRYP ++ L SVSR   +A       +V 
Sbjct: 327 VEGDDHNEPVADAVRGILDGHIVMERRIAERGRYPAINVLRSVSRTMPRACDPAFLPVVQ 386

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              HL+    +  ++  +G YR G    +D+AV  +P +  FL QS  + +S
Sbjct: 387 RARHLMSTHADMEELIRLGAYRAGSSPEVDEAVALMPDLEAFLGQSKEEATS 438


>gi|34539181|gb|AAQ74474.1| F1-ATPase alpha subunit [Ananas comosus]
          Length = 416

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 166/408 (40%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANAFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|296119530|ref|ZP_06838088.1| ATP synthase F1, alpha subunit [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967413|gb|EFG80680.1| ATP synthase F1, alpha subunit [Corynebacterium ammoniagenes DSM
           20306]
          Length = 557

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 188/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               +  + + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 76  VAQNLETNSIGVVVLGNYESLKEGDQVKRTGEVLSIPVGEEFLGRVINPLGQPIDGLGPI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
             G+    +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 136 -AGEEDRVLELQAPSVLQRQPVEEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 194

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +    +          + +V A + +S 
Sbjct: 195 DTILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRKTLEEQGALDYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDLGAGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  + + +       +   +D +    
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLASYRDLQGFAA---FASDLDPVSKAQ 431

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQS S     +
Sbjct: 432 LERGERLVELLKQSESSPQPVE 453


>gi|6561669|gb|AAF17013.1|AF197681_1 ATPase alpha subunit [Cinnamomum camphora]
          Length = 421

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 170/416 (40%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVEDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPESNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 409


>gi|304414272|ref|ZP_07395640.1| type III secretion system ATPase [Candidatus Regiella insecticola
           LSR1]
 gi|304283486|gb|EFL91882.1| type III secretion system ATPase [Candidatus Regiella insecticola
           LSR1]
          Length = 446

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 158/418 (37%), Positives = 233/418 (55%), Gaps = 11/418 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G I  +       +     V +G+    +      L +V+ I   +  + P    + +S
Sbjct: 35  SGSILDVGPTLLRASL--PGVSMGELCRIEPIG--TLVEVVAIEQQVALLSPFSSSDGLS 90

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V       R++  +   GR+++ LG+PID   +L       E+ +  P  + R+ +
Sbjct: 91  SGQSVSPLKHAHRVAVGSRLKGRILDGLGQPIDEGSALKGH--WRELDNSPPDPLTRKPI 148

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           EK F TGIR ID       GQRIG+FA +G+GKSTLLSM   +   D ++++L+GERGRE
Sbjct: 149 EKPFITGIRSIDAMLCCGEGQRIGIFAAAGVGKSTLLSMLCENSDADVMVLALIGERGRE 208

Query: 202 VREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E     +   +++VVVATSD   + R     T  TIAEYF  +G  VLL++DS+T
Sbjct: 209 VREFLEQVLTPEARARTIVVVATSDRPALERLKGVYTGTTIAEYFRERGLKVLLMVDSLT 268

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + REI   +GE P A  +P SVF+ +PRLLER G S   +G+ITA  +VLV+GD+ 
Sbjct: 269 RYARAAREIGLAAGEAPAAGSFPPSVFAAMPRLLERTGNSA--RGSITAFYTVLVEGDDM 326

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA    L   L  + 
Sbjct: 327 NEPVADEVRSLLDGHIVLSRQLAGAGHYPAIDIAASVSRIMPQVVSAKHMALAQKLRLIQ 386

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
            R++E   +  +G Y+ G D   D+A+ + P +  FL+Q   +    E    ++ K L
Sbjct: 387 ARYQEIELLVRVGEYKTGQDPEADEALKRYPAVCAFLQQGRHERCDLEKTLSQLAKVL 444


>gi|6561684|gb|AAF17028.1|AF197696_1 ATPase alpha subunit [Asimina triloba]
          Length = 420

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 174/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVI 191
           +  +TG++ +D   P+  GQR  +      GK      T+L+    +   +        +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGNSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|6561678|gb|AAF17022.1|AF197690_1 ATPase alpha subunit [Liriodendron chinense]
          Length = 422

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVXDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 409


>gi|85060390|ref|YP_456092.1| F0F1 ATP synthase subunit alpha [Sodalis glossinidius str.
           'morsitans']
 gi|124007213|sp|Q2NQ88|ATPA_SODGM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|84780910|dbj|BAE75687.1| ATP synthase alpha subunit [Sodalis glossinidius str. 'morsitans']
          Length = 513

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 111/443 (25%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKVPL-EHDGFSAVEAIAPGVIERQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           S L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 SALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVENYTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K ++    + + LKQ  
Sbjct: 413 LDDATRKQLNHGQKVTELLKQKQ 435


>gi|332665203|ref|YP_004447991.1| ATP synthase subunit alpha [Haliscomenobacter hydrossis DSM 1100]
 gi|332334017|gb|AEE51118.1| ATP synthase subunit alpha [Haliscomenobacter hydrossis DSM 1100]
          Length = 534

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 103/467 (22%), Positives = 170/467 (36%), Gaps = 49/467 (10%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             E ++Q+ +           + + G +  +      V  L+     G+ V  +   S  
Sbjct: 5   RPEEISQILKQQISGFGSASELEEFGTVLQVGDGIARVYGLN-SAQAGELVEFE---SGV 60

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
              V+ +  D V +  +G G+ I  G  V    R   I     + GRV+N LG PIDG  
Sbjct: 61  QAIVLNLEEDNVGVVLMGDGDGIKEGSRVKRTSRIASIEVGEGFVGRVVNPLGHPIDGRG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +      M +  K P  + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +
Sbjct: 121 PITGAKYEMPLERKAPGVIFRQPVNEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAI 180

Query: 178 LSMFARSDCFDK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
                 +             I    G++   V    +          +V+V A++ +   
Sbjct: 181 ALDTIINQREFYDRGEPVFCIYVASGQKASTVANVAKTLEDAGAMAYTVIVAASAADPAP 240

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+  AP     I E+F   G   L+I D +++ A + RE++      P    YP  VF  
Sbjct: 241 LQFYAPFAGACIGEFFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYL 300

Query: 290 LPRLLERIGPSE----------------------------KEKGNITAVISVLVDGDNHN 321
             RLLER                                 K  G++TA+  +     + +
Sbjct: 301 HSRLLERAAKIIANDGIARNMNDLPDSLKNAKDANGQPLVKGGGSLTALPIIETQAADVS 360

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L  +L   G  P ++   SVSR+   A     KK+  +L     
Sbjct: 361 AYIPTNVISITDGQIFLETNLFNAGIRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQA 420

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++ E         +   +D      + +     + LKQ      S +
Sbjct: 421 QYRELE---AFAKFGSDLDPATLAILEKGKRNVEILKQPQYSPVSVE 464


>gi|242238984|ref|YP_002987165.1| ATPase, FliI/YscN family [Dickeya dadantii Ech703]
 gi|242131041|gb|ACS85343.1| ATPase, FliI/YscN family [Dickeya dadantii Ech703]
          Length = 454

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 158/448 (35%), Positives = 241/448 (53%), Gaps = 19/448 (4%)

Query: 1   MQKNLETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + + L TL  + +   S   V + G ++  T +    T L  ++ LG   + +  + D +
Sbjct: 5   LSRWLSTLDSIEKRMASTPTVRRYGRLTRATGLVLEATGL--HLPLGATCMIERPHGDLM 62

Query: 60  ----GQVIRINLDIVYICPVGIGEEISLGDLVFH--------WGRFRISPSACWCGRVIN 107
                +V+  N   +++ P+   + I  G  V+          G+ ++       GR+++
Sbjct: 63  QEVESEVVGFNGQRLFLMPLEEVDGIVPGARVYARIGGDNEGQGK-KLPLGMSLLGRILD 121

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             GKP+DG   L +      + +     + R  ++     G+R I+    +  GQR+G+F
Sbjct: 122 GAGKPLDGL-PLPETGYRASLTTPPFNPLQRTPIDHVLDVGVRAINALLTVGRGQRMGLF 180

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D 
Sbjct: 181 AGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRSRSVVIAAPADV 240

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+LR      A  IAE F  KG +VLLI+DS+TR+A + REIA   GE P  +GYP SV
Sbjct: 241 SPLLRMQGAAYATRIAEDFRDKGYHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSV 300

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LP L+ER G      G+IT   +VL +GD+  DPIADS R+ILDGHIVL+R LAE G
Sbjct: 301 FAKLPALVERAGNGIHGGGSITGFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D  AS+SR             V     L+  ++  +D+  +G Y  G D +LDKA
Sbjct: 361 HYPAIDIEASISRAMTSLIDESHYAKVRQFKQLLSVYQRNKDLISVGAYAAGSDPLLDKA 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED-VFQEI 433
           +   P +  FL+Q   +   ED   Q++
Sbjct: 421 IKLYPRMESFLQQGMYERCDEDHALQQL 448


>gi|300311372|ref|YP_003775464.1| flagellum-specific ATP synthase [Herbaspirillum seropedicae SmR1]
 gi|300074157|gb|ADJ63556.1| flagellum-specific ATP synthase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 468

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 159/440 (36%), Positives = 231/440 (52%), Gaps = 29/440 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           +  G I+ +  +      L   V  G        N   +  +V+    D +++ P    E
Sbjct: 30  MTAGRITRVAGLVMEAVGLKLPV--GSPCNVPLPNGTMIEAEVVGFQDDRLFLMPQSDVE 87

Query: 80  EISLGDLVFH---------WGRF------------RISPSACWCGRVINALGKPIDGDDS 118
            I  G  V+           G              R+       GRV++  G+P+D    
Sbjct: 88  GIVPGTRVYPVEPVRPPPRTGPISFTPRRADEHSRRLPVGEELLGRVLDGAGRPLDNLGP 147

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   + S  +  +    + R  +     TGIR I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 148 L-HTERSAPLAVRAANPLGRAPIRDILDTGIRAINSMLTVGRGQRMGLFAGSGVGKSVLL 206

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D  P++R      
Sbjct: 207 GMMARYTSADVIVVGLIGERGREVKEFIEQILGAEGLARSVVVAAPADTPPLMRLQGAAY 266

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
             +IAEYF  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 267 CTSIAEYFRDQGKDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 326

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  ++  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVLNR LAE G YP +D   S+
Sbjct: 327 GNGDEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRQLAEAGHYPAIDIEQSI 386

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR       A+ ++    L  L  RF+  RD+  +G Y  G D ILD+A+  +P +  FL
Sbjct: 387 SRAMHSITDAEHQRSSRHLKQLYSRFQRNRDLISVGAYAAGSDPILDEAIALLPRMEAFL 446

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q   + +      E  ++L
Sbjct: 447 QQGIHEQAD---VSESLRQL 463


>gi|34498451|ref|NP_902666.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
 gi|34104306|gb|AAQ60665.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
          Length = 437

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 154/438 (35%), Positives = 231/438 (52%), Gaps = 14/438 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIR 64
           + L+QL+      +    G +  +  +      +   +  G   + +      L  QV+ 
Sbjct: 4   QALSQLSVP-DTPVATVSGKLVGVNGLLL--ESVGCPLQTGQRCLVETAGGGWLQAQVVG 60

Query: 65  INLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
              ++ ++ P      ++ G  V      G   I     W GR++N LG+P+DG   LG 
Sbjct: 61  FRREVSFLMPFKKPVGLATGARVLPAPDNGGLMI--GDGWLGRIVNGLGEPLDGKGRLG- 117

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           GD  +         + ++ V+     G+R I+ F  +  GQR+G+FAGSG+GKS LL M 
Sbjct: 118 GDAPLAAHPPQINPLKKKPVDTPLDVGVRAINGFLTMGRGQRVGLFAGSGVGKSVLLGMI 177

Query: 182 ARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
            R    + V++ L+GERGREVREF+E     + L K+V+VVA +DESP++R  A     T
Sbjct: 178 TRHTEAEVVVVGLIGERGREVREFVEHALGAEGLAKAVLVVAPADESPLMRLKATELCHT 237

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IA ++  +G NVLL++DS+TR+A + RE+A   GE P  RGYP SVF  LP L E  G  
Sbjct: 238 IAAHYRDRGRNVLLLVDSLTRYAMAQREVALALGEPPATRGYPPSVFGLLPSLAESAGNG 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+++A+ +VL +GD+  DP+ D+ R+ILDGHIVL+R LAE G YP +D   SVSR 
Sbjct: 298 EGGAGSMSAIYTVLAEGDDQQDPVVDTARAILDGHIVLSRELAERGHYPAIDISRSVSRC 357

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   AD   +   L     R++E R +  +G Y PG D   D+A+   P I   L Q 
Sbjct: 358 MSQLIDADHAAVARELRGAWSRYQEVRGLLPLGAYVPGADPATDRALRLQPRIEALLCQD 417

Query: 421 PSDLSSEDVFQEITKKLQ 438
             + +    + E   +LQ
Sbjct: 418 AGEAA---PYAECLSRLQ 432


>gi|319898001|ref|YP_004136198.1| f1 sector of membrane-bound ATP synthase, alpha subunit
           [Haemophilus influenzae F3031]
 gi|317433507|emb|CBY81890.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Haemophilus influenzae F3031]
          Length = 513

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 103/444 (23%), Positives = 184/444 (41%), Gaps = 30/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NCYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQF 436


>gi|292487989|ref|YP_003530866.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
 gi|292899209|ref|YP_003538578.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291199057|emb|CBJ46168.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291553413|emb|CBA20458.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
 gi|312172114|emb|CBX80371.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC BAA-2158]
          Length = 453

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 159/436 (36%), Positives = 237/436 (54%), Gaps = 17/436 (3%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-- 62
           L+TL Q      +  V + G +   T +    T L   + LG   V + +++  +G+V  
Sbjct: 12  LDTLEQRIGQLPE--VRRYGRLIRATGLVLEATGL--QLPLGATCVIERQDNLGIGEVES 67

Query: 63  --IRINLDIVYICPVGIGEEISLGDLVFHW-------GRFRISPSACWCGRVINALGKPI 113
             +  N   + + P+   E I  G  V+            ++       GRV++  G+P+
Sbjct: 68  EVVGFNGQKLLLMPLEEVEGIVPGARVYARVSGDSQHSAKQLMLGPELLGRVLDGSGRPL 127

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG  +   G     +++     + R  + +   TG+R I+    +  GQR+G+FAGSG+G
Sbjct: 128 DGLPAPETG-YRAPLITPPFNPLQRTPITEVLDTGVRAINALLTVGRGQRMGLFAGSGVG 186

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           KS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++VV+ A +D SP+LR 
Sbjct: 187 KSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVIAAPADVSPLLRM 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
                A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP 
Sbjct: 247 QGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPA 306

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D
Sbjct: 307 LVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAID 366

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+            V     L+  ++  RD+  +G Y  G D  LDKA+   P 
Sbjct: 367 IEASISRVMAHLIDETHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTDPTLDKAIKLYPE 426

Query: 413 IYDFLKQSPSDLSSED 428
           +  FL+Q   + S+ D
Sbjct: 427 LEAFLQQGMFERSTFD 442


>gi|6561670|gb|AAF17014.1|AF197682_1 ATPase alpha subunit [Laurus nobilis]
          Length = 418

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 170/416 (40%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V     +S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPESNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 408


>gi|323490145|ref|ZP_08095365.1| flagellum-specific ATP synthase [Planococcus donghaensis MPA1U2]
 gi|323396193|gb|EGA89019.1| flagellum-specific ATP synthase [Planococcus donghaensis MPA1U2]
          Length = 438

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 159/423 (37%), Positives = 246/423 (58%), Gaps = 10/423 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPVGI 77
           + + G +  +     T+        +G+  +            +V+    + + + P+  
Sbjct: 18  IKKHGKVIQVIG--LTIESRGPNAKIGELCLLYPNRNEPPIEAEVVGFKENRIMLMPLQD 75

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
             ++  G LV   G   +I       G+V++  G P+D    L +G       +  P  +
Sbjct: 76  LSQVGPGCLVVATGGPLQIKVGPSILGKVLDGTGMPLDES-LLPRGLKKYSTNNAPPNPL 134

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R R++K  + G+R ID    +  GQRIGVFAGSG+GKSTL+ M AR+   D  +I+LVG
Sbjct: 135 KRPRIDKPLEVGVRAIDGLLTVGQGQRIGVFAGSGVGKSTLMGMIARNTEADINVIALVG 194

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVR+FI  D   + LKKSVVV ATSD++P+ R  A LTA  IAEYF  +G NV+L+
Sbjct: 195 ERGREVRDFIERDLGPEGLKKSVVVAATSDQTPMQRIKAALTATAIAEYFRDQGKNVMLM 254

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + RE+    GE P ++GY  SVF+ LP+LLER G S K  G+ITA  +VLV
Sbjct: 255 MDSVTRFAMAQREVGLAVGEPPTSKGYTPSVFALLPKLLERSGTSSK--GSITAFYTVLV 312

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGHIVL+R +A++G++P ++ +ASVSR+  +  S + +     
Sbjct: 313 DGDDMNEPIADAVRGILDGHIVLDRKIAQKGQFPAINVMASVSRVMHEVVSEEHQLAARD 372

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434
              L+  +E + D+  IG Y+ G +  +D A+   P+I ++L+Q   + +  E+  + ++
Sbjct: 373 FKRLLAAYETSEDLINIGAYKSGANKEIDDAIRAYPVIKEYLQQDIYEKAKIEESVERLS 432

Query: 435 KKL 437
            + 
Sbjct: 433 AQF 435


>gi|27461601|gb|AAM95217.1| ATPase F1 alpha subunit [Prionium serratum]
          Length = 413

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 170/408 (41%), Gaps = 22/408 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLEXENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G            GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVXXXAGKAILGRVVDALGLPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERG 199
           + +D   P+  GQR  +      GK+ +          L+           +   +G++ 
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNERGTESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++    G  L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILAEGHALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + ++ E   +     +   +D      +++   + + LKQ   + 
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYEP 400


>gi|227503867|ref|ZP_03933916.1| F0F1 ATP synthase subunit alpha [Corynebacterium striatum ATCC
           6940]
 gi|227199490|gb|EEI79538.1| F0F1 ATP synthase subunit alpha [Corynebacterium striatum ATCC
           6940]
          Length = 557

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/442 (23%), Positives = 191/442 (43%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ + + +  +G  E ++ GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 76  VAQNLDTNSIGVVVLGNFESLTEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDGLGPI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 136 AAEEDRV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCI 194

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +             + + +V A + ++ 
Sbjct: 195 DTILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRHTLEQHGALEYTTIVAAPASDAA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLELAAY---RDLQAFAAFASDLDPASKAQ 431

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ+ S     +
Sbjct: 432 LERGERLVELLKQAESSPQPVE 453


>gi|83716747|ref|YP_438376.1| flagellum-specific ATP synthase [Burkholderia thailandensis E264]
 gi|167614822|ref|ZP_02383457.1| flagellum-specific ATP synthase [Burkholderia thailandensis Bt4]
 gi|257141407|ref|ZP_05589669.1| flagellum-specific ATP synthase [Burkholderia thailandensis E264]
 gi|83650572|gb|ABC34636.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
          Length = 435

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 164/438 (37%), Positives = 238/438 (54%), Gaps = 12/438 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           L  L  L E  S  +    G ++ +T +    +     +  G+  V +  + D +  QV+
Sbjct: 3   LSALRNL-ELDSVPVARMTGRLTGVTGLLLKASG--CRLETGERCVIESADGDRIDAQVV 59

Query: 64  RINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
             N +  ++ P      +  G  V      G  RI     W GR++N LG+ IDG   LG
Sbjct: 60  GFNREETFLMPFKKPVGLVAGAQVLSCDRQGSLRI--GRSWLGRIVNGLGEAIDGRGPLG 117

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            GD+++         + ++ V      G+R ID    L  GQR+G+ AGSG+GKS LL M
Sbjct: 118 -GDVALRAHPAPVNPLRKRPVRDTLDVGVRAIDGLLTLGRGQRVGLMAGSGVGKSMLLGM 176

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R+   D V++ L+GERGREVREF++       L KSV+V A +DESP++R  A     
Sbjct: 177 ITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLVAAPADESPLMRLKAAELCH 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IA +F   G NVLL++DS+TR+A + REIA + GE P  RGYP SVF  LP+L+E  G 
Sbjct: 237 AIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATRGYPPSVFGMLPQLVETAGN 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R LAE G YP +D   SVSR
Sbjct: 297 GEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTRELAERGHYPAIDVPRSVSR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +   A+ + L   +  +I R E+ RD+  +GGY  G D   D+AV +   I  FL+Q
Sbjct: 356 CMSQVAGAEHEALARKVKEMIGRHEQVRDLIPLGGYVQGADPATDEAVAKAARIDAFLRQ 415

Query: 420 SPSDLSSEDVFQEITKKL 437
              D++  D      ++L
Sbjct: 416 DMRDVARRDATLAALREL 433


>gi|294624656|ref|ZP_06703327.1| ATP synthase subunit A [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601050|gb|EFF45116.1| ATP synthase subunit A [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 515

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++ L +   + +         G ++S++     +  L+  V  G+ +       + 
Sbjct: 6   NPSEISDLIKTRIEAVKLSAESRNEGSVTSVSDGIVRIFGLAD-VMQGEMIELPN---NT 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G  E +  GD+    GR   +       GRV+NALG+PIDG  
Sbjct: 62  FALALNLERDSVGAVVLGDYESLREGDVAKTTGRILEVPVGPELLGRVVNALGEPIDGKG 121

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            LG    +  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK+ L
Sbjct: 122 PLGAT-QTAPVERVAPGVIWRKSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTAL 180

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +     +     +VVV AT+ ES  ++ ++
Sbjct: 181 AIDAVINQKGTGIKCVYVAIGQKASTVANIVRKLEENGALAHTVVVAATASESAAMQYIS 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    RLL
Sbjct: 241 PYAGCTMGEYFMDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLL 300

Query: 295 ERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +E              G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 301 ERAARVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETD 360

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 361 LFNAGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRISLAQYRE---LAAFAQFASDLDE 417

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              K + +   + + +KQ  
Sbjct: 418 ATRKQLERGQRVTELMKQKQ 437


>gi|68487802|ref|XP_712242.1| hypothetical protein CaO19.6854 [Candida albicans SC5314]
 gi|46433615|gb|EAK93049.1| hypothetical protein CaO19.6854 [Candida albicans SC5314]
          Length = 447

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 95/382 (24%), Positives = 166/382 (43%), Gaps = 18/382 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G    +  G+ V   G+    P      GRV++ LG PIDG   +
Sbjct: 1   MALNLEADQVGVVLFGSDRLVKEGETVKRTGQIVSVPIGPELLGRVVDGLGNPIDGKGPI 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  KAAAYSRA-QVKAPGILPRRSVHEPMQTGLKSVDALVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
             +L+    ++  D       +   VG++   V + ++     D LK SV+V AT+ E+ 
Sbjct: 120 DAILNQKRWNNGSDEKKKLYCVYVAVGQKRSTVAQLVQTLEQHDALKYSVIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP TA  I E+F   G + L++ D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYIAPFTACAIGEWFRDNGRHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKMSDAYGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           +++   +   LKQ   +  + +
Sbjct: 357 LNRGERLTQLLKQKQYNPLAAE 378


>gi|167576647|ref|ZP_02369521.1| flagellum-specific ATP synthase [Burkholderia thailandensis TXDOH]
          Length = 435

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 164/438 (37%), Positives = 238/438 (54%), Gaps = 12/438 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           L  L  L E  S  +    G ++ +T +    +     +  G+  V +  + D +  QV+
Sbjct: 3   LSALRNL-ELDSVPVARMTGRLTGVTGLLLKASG--CRLETGERCVIESADGDRIDAQVV 59

Query: 64  RINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
             N +  ++ P      +  G  V      G  RI     W GR++N LG+ IDG   LG
Sbjct: 60  GFNREETFLMPFKKPVGLVAGAQVLSCDRQGSLRI--GRSWLGRIVNGLGEAIDGRGPLG 117

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            GD+++         + ++ V      G+R ID    L  GQR+G+ AGSG+GKS LL M
Sbjct: 118 -GDVALRAHPAPVNPLRKRPVRDTLDVGVRAIDGLLTLGRGQRVGLMAGSGVGKSMLLGM 176

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R+   D V++ L+GERGREVREF++       L KSV+V A +DESP++R  A     
Sbjct: 177 ITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLVAAPADESPLMRLKAAELCH 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IA +F   G NVLL++DS+TR+A + REIA + GE P  RGYP SVF  LP+L+E  G 
Sbjct: 237 AIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATRGYPPSVFGMLPQLVEMAGN 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R LAE G YP +D   SVSR
Sbjct: 297 GEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTRELAERGHYPAIDVPRSVSR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +   A+ + L   +  +I R E+ RD+  +GGY  G D   D+AV +   I  FL+Q
Sbjct: 356 CMSQVAGAEHEALARKVKEMIGRHEQVRDLIPLGGYVQGADPATDEAVAKAARIDAFLRQ 415

Query: 420 SPSDLSSEDVFQEITKKL 437
              D++  D      ++L
Sbjct: 416 DMRDVARRDATLAALREL 433


>gi|157964053|ref|YP_001504087.1| F0F1 ATP synthase subunit alpha [Shewanella pealeana ATCC 700345]
 gi|189081318|sp|A8HAG5|ATPA_SHEPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157849053|gb|ABV89552.1| ATP synthase F1, alpha subunit [Shewanella pealeana ATCC 700345]
          Length = 513

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYATLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPID-SDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|170738290|ref|YP_001779550.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
 gi|169820478|gb|ACA95060.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
          Length = 449

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 157/429 (36%), Positives = 248/429 (57%), Gaps = 10/429 (2%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVY 71
           D + +L  + G +         V+ +   V  G+    +    + +   +V+  + D   
Sbjct: 26  DRAAHLSTR-GKVMDALGTLIRVSGID--VRYGELCELRTGQGELMQCAEVVGFSRDTAL 82

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           + P G  + +S    V    R   I   +   GRV++++G+PIDG   +   + +  + +
Sbjct: 83  LSPFGRLDGLSRDTQVVALRRPLAIPVGSALFGRVVDSMGRPIDGRGPIDTTE-TAALYA 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P AM+R  +E+   TG+RV+D    L  GQR+G+FA +G+GKSTL+ MFAR    D  
Sbjct: 142 APPDAMSRPLLERSLDTGVRVVDGLMTLGEGQRVGIFAPAGVGKSTLMGMFARGTRCDLN 201

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGREVREFIE  LG + + +S+VV ATSD S I R  A  +A  IAEYF  +G
Sbjct: 202 VIALIGERGREVREFIEQILGPEGIARSIVVCATSDRSSIERVKAAYSATAIAEYFRDRG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VLL++DS+TRFA + REI   +GE P  RG+P S+F+ELPRLLER G SE   G+ITA
Sbjct: 262 KRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGLSE--HGSITA 319

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VL + ++ +DP+A+ VR ILDGH++L+R +A   +YP +D LAS+SR+  +      
Sbjct: 320 LYTVLAEDESGSDPVAEEVRGILDGHMILSREIAARNQYPAIDVLASLSRVMPQVTDDAH 379

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++    +  L+ +  +   +  +G YR G D + D+AV ++  I  FL Q   + S+ + 
Sbjct: 380 REAAGHVRRLLAKHRDIETLLQLGEYRAGGDPVADEAVRKIEAIRQFLCQRTDEFSTREA 439

Query: 430 FQEITKKLQ 438
            ++  + L+
Sbjct: 440 TRDALRGLR 448


>gi|207728377|ref|YP_002256771.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           MolK2]
 gi|206591623|emb|CAQ57235.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           MolK2]
          Length = 481

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 154/426 (36%), Positives = 224/426 (52%), Gaps = 23/426 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV  G ++ +  +      L   V     V         L +V+    +  ++ P     
Sbjct: 41  VVSCGKLTRVAGLVMEAVGLKLPVGSACRVELP-HGRHVLAEVVGFAEERAFLMPQTDLV 99

Query: 80  EISLGDLVFHWGRFRIS---------------PSACWCGRVINALGKPIDGDDSLGKGD- 123
            +  G  VF      +                      GRV++A G+P+DG   LG  + 
Sbjct: 100 GVVPGARVFPLEPQHLPLDAADPTIAHSKFLPVGPRLLGRVVDANGEPLDGKGPLGTHEE 159

Query: 124 LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           L+   +S  P   + R+ +E     G+R I+    +  GQR+G+FAGSG+GKS LL M A
Sbjct: 160 LAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMA 219

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D SP++R      A TI
Sbjct: 220 RYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADNSPLMRLQGAAYAHTI 279

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS- 300
           AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G   
Sbjct: 280 AEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAGNGM 339

Query: 301 ---EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAE+G YP +D   S+
Sbjct: 340 VDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSI 399

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+       ++         L  R++  RD+  +G Y  G D + D+A+ + P +  FL
Sbjct: 400 SRVMSAIVQREQLDAARRFKQLYARYQRNRDLIAVGAYARGSDPMTDQAIARYPDMEGFL 459

Query: 418 KQSPSD 423
           +Q   +
Sbjct: 460 QQGMFE 465


>gi|164685602|gb|ABY66747.1| atp1 [Kallstroemia parviflora]
          Length = 413

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVHGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 I   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESEKLYCIYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|238921741|ref|YP_002935256.1| F0F1 ATP synthase subunit alpha [Edwardsiella ictaluri 93-146]
 gi|259585427|sp|C5BF38|ATPA_EDWI9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|238871310|gb|ACR71021.1| ATP synthase subunit alpha [Edwardsiella ictaluri 93-146]
          Length = 513

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-EHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   VG++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAVDAIINQRDSGIKCIYVAVGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVETFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|311740605|ref|ZP_07714432.1| ATP synthase F1 sector alpha subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311304125|gb|EFQ80201.1| ATP synthase F1 sector alpha subunit [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 557

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 105/442 (23%), Positives = 188/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ + + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 76  VAQNLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDGMGPI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 136 NAEEERV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCI 194

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +               + +V A + +S 
Sbjct: 195 DTILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRRTLEEHGALDYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++    I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVGAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLASY---RDLQAFAAFASDLDAASKAQ 431

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQS S     +
Sbjct: 432 LERGSRLVELLKQSESSPQPVE 453


>gi|111115113|ref|YP_709731.1| flagellum-specific ATP synthase [Borrelia afzelii PKo]
 gi|216264022|ref|ZP_03436016.1| flagellar protein export ATPase FliI [Borrelia afzelii ACA-1]
 gi|110890387|gb|ABH01555.1| flagellum-specific ATP synthase [Borrelia afzelii PKo]
 gi|215980066|gb|EEC20888.1| flagellar protein export ATPase FliI [Borrelia afzelii ACA-1]
          Length = 436

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 156/430 (36%), Positives = 247/430 (57%), Gaps = 7/430 (1%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH-QGKNSDNLGQVIRINLDI 69
           L +      V   G +  I  +   V  L     +GD  +  Q  N     +V+  N   
Sbjct: 9   LRQVGDIETVAFVGRVQKIKGLL--VESLGPQCAVGDLCLIDQRNNKKVCAEVLGFNGPY 66

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S         I
Sbjct: 67  VSLMAYEGFSGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNKYKELI 126

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K+ P ++R   E+   TG++V+D F P+  GQR+G+F+G+G+GKSTLL M A++   D
Sbjct: 127 FEKINP-ISRSIFEEQILTGVKVLDGFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNAD 185

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      A  IAEYF  
Sbjct: 186 VNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRD 245

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +V L+ DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G      G++
Sbjct: 246 QGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSG-FNGNGGSV 304

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T   +VLV+GD+  +P+AD+++++LDGH++L+R L + G YP ++ L+S SR   +  S 
Sbjct: 305 TGFYTVLVEGDDFAEPVADNIKAVLDGHVILDRDLFDRGIYPSINILSSTSRSIHRIMSL 364

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I DF+ Q  ++    
Sbjct: 365 EKQKLIMKARNLLSVYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIIDFISQGINETFDF 424

Query: 428 DVFQEITKKL 437
           +  ++  +K+
Sbjct: 425 ENLEDEIRKI 434


>gi|256828748|ref|YP_003157476.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577924|gb|ACU89060.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfomicrobium baculatum
           DSM 4028]
          Length = 585

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 115/425 (27%), Positives = 189/425 (44%), Gaps = 15/425 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
              ++ + E ++  L + + G I+S+ +    V+ L   V   + V+  G   D  G   
Sbjct: 14  FSNISHVRETFTPQLTLREVGTITSVATGIAKVSGL-PGVGYDELVMFPG---DVPGIAF 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKG 122
            ++ D + +  +G    +  GD V   GR           GRVI+ LG+P+DG+  +  G
Sbjct: 70  NVDEDEIGVVLLGEYWHLQAGDEVRRTGRVMDVAVGDSLLGRVIDPLGRPLDGNGPV-AG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + +    PP M+R  V +  +TG++VID   P+  GQR  +      GK+ +     
Sbjct: 129 NRRLPVERTAPPIMDRSPVTEPLQTGLKVIDALIPVGRGQRELILGDRQTGKTAIAMDTI 188

Query: 183 RS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +  D     +   +G+R   V + +     +     +V+VV   ++ P L  +AP  A 
Sbjct: 189 LNQRDQDVLCVYCAIGQRASAVAKAVATLQKNGAMEYTVIVVTEGNDPPGLAYIAPYAAT 248

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG- 298
           +IAEYF   G +VL++ D +T  A + RE++      P    +P  +F    RLLER   
Sbjct: 249 SIAEYFMEAGRDVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERATH 308

Query: 299 -PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +  +  + +  I  ++ SI DG I L+ SL E G  P VD   SV
Sbjct: 309 LREEAGGGSLTALPVIETEAQDISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGKSV 368

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  KA  A  + +   L     +FEE       G     +D    K +     I   L
Sbjct: 369 SRVGGKAQRAAYRAVAGDLKLAYAQFEELETFSRFG---ARLDEDTRKILEHGRRIRACL 425

Query: 418 KQSPS 422
           KQ  S
Sbjct: 426 KQQES 430


>gi|86158021|ref|YP_464806.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774532|gb|ABC81369.1| type III secretion system ATPase, FliI/YscN [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 435

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 161/418 (38%), Positives = 231/418 (55%), Gaps = 11/418 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEIS 82
           G ++ +T +          V  G+ V  +    +  L +V+ +  D   + P G    + 
Sbjct: 22  GRVTRLTGLVLEAAV--GGVRQGEAVELRAPGREPLLAEVVGLRDDRAVLVPFGELGGVG 79

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           L   V   GR   I       GRV++ LG+P+DG   L  G     +    P  + R+ V
Sbjct: 80  LDAEVIPTGRPHAIRVGPGLLGRVLDGLGRPLDGA-PLPAGLEEWAVDRPAPNPLARRPV 138

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
                 G+RV+D       GQRIG+FAGSG+GKSTLL   AR    D  ++ LVGERGRE
Sbjct: 139 AAPLPLGVRVLDGLLTAGEGQRIGLFAGSGVGKSTLLGQLARGARADLCVVCLVGERGRE 198

Query: 202 VREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E     D L +SVVV ATSD   ++R  A   A  +AE+F+ +GD VLL++DS+T
Sbjct: 199 VREFLEGPLGADGLARSVVVAATSDAPALVRLKAAHVATAVAEWFAERGDRVLLLVDSVT 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A ++RE+   +GE P  +GYP SVF+ LPRLLER G   + +G ITAV +VLV G + 
Sbjct: 259 RYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGN--RARGGITAVYTVLVAGGDL 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            +PIAD VR ILDGH+VL+R++A  GR+P VDPL S+SR+       D       +  L+
Sbjct: 317 EEPIADEVRGILDGHVVLDRAVAAGGRFPAVDPLQSLSRVMPAVAGPDHLAAAGRVRALL 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
                 RD+  +G YR G D   D A+ ++P +  FL+Q   + +    F+E  ++L+
Sbjct: 377 AAHARVRDLVALGAYRAGGDPEADLALARLPALEAFLRQPLGEPA---PFEETLRRLE 431


>gi|261855057|ref|YP_003262340.1| flagellar protein export ATPase FliI [Halothiobacillus neapolitanus
           c2]
 gi|261835526|gb|ACX95293.1| flagellar protein export ATPase FliI [Halothiobacillus neapolitanus
           c2]
          Length = 465

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 152/438 (34%), Positives = 241/438 (55%), Gaps = 10/438 (2%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVI 63
           L  L     +  +   G I  +  +    + L+    +GD                 +V+
Sbjct: 28  LMGLQARVQRPPLQAEGRIVRVVGLALEASGLT--AAIGDQCRIFLDDDPAGRFVDAEVV 85

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                  Y+ P+     I+ G  V + G   R+       GRV++A G+P+D   ++  G
Sbjct: 86  GFAERNTYLMPLEALRGIAPGCRVQNQGASIRMPLGPELLGRVLDARGQPLDDGPAIF-G 144

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D+ +++  +    + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  
Sbjct: 145 DIPVDLQGRSNNPLKRRPIREPLDVGVRAINALLTVGRGQRMGIFAGSGVGKSVLLGMMT 204

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    + +++ L+GERGREVREF+ + L D    +++V+ A +D SP++R      A  I
Sbjct: 205 RYTTAEIIVVGLIGERGREVREFVAEILDDEARSRAIVIAAPADASPLMRLHGASLATAI 264

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TR+A + REI    GE P  +GYP SVF+ LP L+ER G  E
Sbjct: 265 AEYFREQGHDVLLLMDSLTRYAQAQREIGLAIGEPPATKGYPPSVFARLPALVERAGNGE 324

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G++TA  +VLV+GD+ NDPIAD+ R+ILDGHIVL+R++AE GRYP +D  AS+SRL 
Sbjct: 325 SARGSMTAFYTVLVEGDDQNDPIADAARAILDGHIVLSRAIAERGRYPAIDIEASISRLM 384

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S +   L+     L+  + ++RD+  +G YR G D+ LD+A+   P +  F+ QS 
Sbjct: 385 PALVSPEHLDLMQRFKQLMSTYNQSRDLLAVGAYRRGHDVRLDRAIDAQPDLEAFISQSI 444

Query: 422 SDLSSED-VFQEITKKLQ 438
            + +  D  F  +   + 
Sbjct: 445 HESADLDSSFAALESLMH 462


>gi|188534123|ref|YP_001907920.1| flagellum-specific ATP synthase [Erwinia tasmaniensis Et1/99]
 gi|188029165|emb|CAO97037.1| Flagellum-specific ATP synthase [Erwinia tasmaniensis Et1/99]
          Length = 452

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 161/437 (36%), Positives = 237/437 (54%), Gaps = 19/437 (4%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-- 62
           L+ L Q  E   +    + G +   T +    T L   + LG   V +  ++  +G+V  
Sbjct: 11  LDNLEQRMEQLPE--ARRYGRLVRATGLVLEATGL--QLPLGATCVIERHDNQGIGEVDS 66

Query: 63  --IRINLDIVYICPVGIGEEISLGDLVF--------HWGRFRISPSACWCGRVINALGKP 112
             +  N   + + P+   E I  G  V+        H G+ ++       GRV++  G+P
Sbjct: 67  EVVGFNGQKLLLMPLEEVEGIVPGARVYARVSGDSQHSGK-QLMLGPELLGRVLDGSGRP 125

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +     TG+R I+    +  GQR+G+FAGSG+
Sbjct: 126 LDGLPAPETG-YRAPLITPPFNPLQRTPITDVLDTGVRAINALLTVGRGQRMGLFAGSGV 184

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 185 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARSVVIAAPADVSPLLR 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 245 MQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 304

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +
Sbjct: 305 ALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAI 364

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR+            V     L+  ++  RD+  +G Y  G D  LDKA+   P
Sbjct: 365 DIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTDPTLDKAIKLYP 424

Query: 412 IIYDFLKQSPSDLSSED 428
            +  FL+Q   + S+ D
Sbjct: 425 ELEAFLQQGMFERSTFD 441


>gi|148827677|ref|YP_001292430.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittGG]
 gi|166201667|sp|A5UGZ1|ATPA_HAEIG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148718919|gb|ABR00047.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittGG]
          Length = 513

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/448 (22%), Positives = 183/448 (40%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEID-NDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYREL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|254788506|ref|YP_003075935.1| F0F1 ATP synthase subunit alpha [Teredinibacter turnerae T7901]
 gi|259585438|sp|C5BKJ7|ATPA_TERTT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|237685526|gb|ACR12790.1| ATP synthase F1, alpha subunit [Teredinibacter turnerae T7901]
          Length = 513

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 182/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL V       G + S+T     +  L++ V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKARIDNLSVTTEAQNEGTVVSVTDGIIRIHGLAE-VMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGIALNLERDSVGAVILGDYQGVAEGQTCKCTGRILEVPVGPELQGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  I    P  + RQ V++  + G++ +D   P+  GQR  +      GK+
Sbjct: 119 KGPID-AKATDAIEKIAPGVIARQSVDQPVQIGLKAVDTMVPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      K I   +G++   +   +           ++VV AT+ +   ++ 
Sbjct: 178 AIAVDAIINQKGTGIKCIYVAIGQKASSIASVVRKLEEHGAMDHTIVVAATASDPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGEDCLIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNAAHVEKYTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SDLFNAGIRPAMNAGISVSRVGGSAQTKVIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      ++    + + +KQ      S
Sbjct: 415 DEATKAQLNHGQRVTELMKQKQYSPQS 441


>gi|221052979|ref|XP_002257864.1| ATP synthase F1, alpha subunit [Plasmodium knowlesi strain H]
 gi|193807696|emb|CAQ38400.1| ATP synthase F1, alpha subunit, putative [Plasmodium knowlesi
           strain H]
          Length = 552

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 183/444 (41%), Gaps = 28/444 (6%)

Query: 6   ETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--------QGKNS 56
           + L +  E++  K    + GY+ S+         L+  V   + +          +G +S
Sbjct: 39  KILEKKFENFDFKTSANEVGYVLSVGDGICRAFGLN-NVKSSELLEIHNSDTSAGEGASS 97

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDG 115
              G    +  D V +   G    I  GD++    R           GRV++ LGK IDG
Sbjct: 98  ITYGMATNLEYDNVGVVIFGNDRNIKEGDIIKRTNRIIDVSVGPELLGRVVDGLGKEIDG 157

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG-- 173
              +   +   +I  K P  + R+ V +   TGI+ ID   P+  GQR  +      G  
Sbjct: 158 GKPIQTNE-KRKIEIKAPGIIARKSVNESIITGIKCIDSLVPIGRGQRELIIGDRQTGKT 216

Query: 174 --------KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATS 224
                       ++           I   +G++   + + +      D LK +++V +++
Sbjct: 217 AIAVDTIIHQKNINEQVPDSEKVYCIYVAIGQKKSNIAKLVNLLKKYDALKYTIIVNSSA 276

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            ++  L+ +AP T   +AEYF   G + L+I D +++ A + R+++      P    YP 
Sbjct: 277 SDASPLQFLAPYTGCAMAEYFRDNGKHALIIFDDLSKQAVAYRQLSLLLRRPPGREAYPG 336

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            +F    +LLER      +   G++TA+  +    ++ +  I  +V SI DG I L   L
Sbjct: 337 DIFYIHSKLLERSSKLNDKLKGGSLTALPIIETLNNDVSAYIPTNVISITDGQIFLESEL 396

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P ++   SVSR+   A     KKL SS+   + +F E   I     +   +D  
Sbjct: 397 FYKGIIPAINVGLSVSRIGSSAQYKCMKKLASSMKLELAQFRE---IVAFSQFGSDLDAS 453

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS 426
             K + +  I+ + LKQ      S
Sbjct: 454 TKKLIEKGKILTEILKQKQYSPVS 477


>gi|164685596|gb|ABY66744.1| atp1 [Pandanus sp. SKJ8Jan99]
          Length = 411

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 21/405 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERG 199
           ++ +D   P+  GQR  +      GK+ +      +               +   +G++ 
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 397


>gi|83747625|ref|ZP_00944661.1| FliI [Ralstonia solanacearum UW551]
 gi|207739706|ref|YP_002258099.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           IPO1609]
 gi|83725677|gb|EAP72819.1| FliI [Ralstonia solanacearum UW551]
 gi|206593088|emb|CAQ59994.1| flagellum-specific atp synthase protein [Ralstonia solanacearum
           IPO1609]
          Length = 481

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 154/426 (36%), Positives = 224/426 (52%), Gaps = 23/426 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV  G ++ +  +      L   V     V         L +V+    +  ++ P     
Sbjct: 41  VVSCGKLTRVAGLVMEAVGLKLPVGSACRVELP-HGRHVLAEVVGFAEERAFLMPQTDLV 99

Query: 80  EISLGDLVFHWGRFRIS---------------PSACWCGRVINALGKPIDGDDSLGKGD- 123
            +  G  VF      +                      GRV++A G+P+DG   LG  + 
Sbjct: 100 GVVPGARVFPLEPQHLPLDAADPTIAHSKFLPVGPRLLGRVVDANGEPLDGKGPLGTHEE 159

Query: 124 LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           L+   +S  P   + R+ +E     G+R I+    +  GQR+G+FAGSG+GKS LL M A
Sbjct: 160 LAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMA 219

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D SP++R      A TI
Sbjct: 220 RYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADNSPLMRLQGAAYAHTI 279

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS- 300
           AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G   
Sbjct: 280 AEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAGNGM 339

Query: 301 ---EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAE+G YP +D   S+
Sbjct: 340 VDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSI 399

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+       ++         L  R++  RD+  +G Y  G D + D+A+ + P +  FL
Sbjct: 400 SRVMSAIVQREQLDAARRFKQLYARYQRNRDLIAVGAYARGSDPMTDQAIARYPDMEGFL 459

Query: 418 KQSPSD 423
           +Q   +
Sbjct: 460 QQGMFE 465


>gi|115443540|ref|YP_778559.1| ATP synthase CF1 alpha chain [Bigelowiella natans]
 gi|122233797|sp|Q06J68|ATPA_BIGNA RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|110810185|gb|ABG91391.1| ATP synthase CF1 alpha chain [Bigelowiella natans]
          Length = 497

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 91/424 (21%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 12  AEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
            ++Y+  L +   G +  +      V  L Q    G+ ++ +  +   +G    +  + +
Sbjct: 17  IQNYNSELKLNNVGVVFKVGDGIVRVFGL-QGAMAGELLLFEEGS---VGIAFNLEKNNI 72

Query: 71  YICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            +  +G    I  G +V   G+   +     + GR++++L  PIDG   +      + I 
Sbjct: 73  GVVLLGDCTLIQEGMIVKGTGKIGEVPVGDKFLGRIVDSLANPIDGKGDIVSSQTRL-IE 131

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-- 187
              P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+ +      +     
Sbjct: 132 PPAPGIVDRRSVYEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTILNQKGKD 191

Query: 188 DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            K +   VG++   + + +           +++V A +D +  ++ +AP +   +AEYF 
Sbjct: 192 VKCVYVAVGQKSSSIAQVVTTLQDKGALDYTILVSAAADTTATMQYIAPYSGTALAEYFM 251

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
             G + L++ D +++ A + RE++      P    YP  VF    RLLER          
Sbjct: 252 YNGSHALVVYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDSLGG 311

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  V     + +  I  +V SI DG I L+  +   G  P ++   SVSR+   A
Sbjct: 312 GSLTALPIVETQEGDVSAYIPTNVISITDGQIFLSSDIFNAGFRPAINVGISVSRVGSAA 371

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                K++   L   + +F E         +   +D      + +   + + LKQ     
Sbjct: 372 QPKAMKRVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGKRLREILKQPQYSP 428

Query: 425 SSED 428
            S +
Sbjct: 429 LSLE 432


>gi|42526727|ref|NP_971825.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC
           35405]
 gi|41817042|gb|AAS11736.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC
           35405]
          Length = 474

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 167/423 (39%), Positives = 239/423 (56%), Gaps = 10/423 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYIC 73
             + +   G +  +               +G+   +    N D L  +V+ +N  IV + 
Sbjct: 14  ETDPIKFTGRVVRVHDKLIESEG--PVASVGELCQIITDDNPDGLKAEVVGLNGTIVQLM 71

Query: 74  PVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
                + + +GDLV   G    +       GRV++AL K  DG            +++  
Sbjct: 72  SYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKSADGKPEPYSAK-RYPVVASP 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P AM R+ + +   TGIR ID    +  GQR+G+FAG+GIGKSTLL M AR+   D  +I
Sbjct: 131 PDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIGKSTLLGMIARNTNADVNVI 190

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           +L+GERGREV +FI  D   + LK SV+V ATSD+S + R     TA  IAEYF  +G +
Sbjct: 191 ALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGKD 250

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           V+L+ DS+TRFA + REI    GE P  RGY  SVFS LP+LLER G SEK  G+IT   
Sbjct: 251 VMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSGTSEK--GSITGFY 308

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V+ L S+SRL+++    + K 
Sbjct: 309 TVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKD 368

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF 430
               +  L+  + E+ D+  +G Y+ G    +D A+   P IYDFL Q   D +  +D  
Sbjct: 369 ASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPRIYDFLTQEVDDPAKLKDTL 428

Query: 431 QEI 433
           Q++
Sbjct: 429 QKL 431


>gi|315223638|ref|ZP_07865492.1| ATP synthase F1 sector alpha subunit [Capnocytophaga ochracea
           F0287]
 gi|314946419|gb|EFS98414.1| ATP synthase F1 sector alpha subunit [Capnocytophaga ochracea
           F0287]
          Length = 526

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 104/449 (23%), Positives = 168/449 (37%), Gaps = 36/449 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   +   + + G +  +      +  LS     G+ V          G V+ +  D
Sbjct: 15  EQLAHFDANASLEEVGTVLQVGDGIARIFGLS-NAQYGELVKFDNG---LQGIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G   +I  GD +   G    I+      GRV+N LG+PIDG   +      M 
Sbjct: 71  NVGITLLGPSTDIKEGDTIKRTGLIASINVGEGIVGRVVNTLGQPIDGKGPITGKLYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIFRQPVNEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          + +V A + +   ++  AP    
Sbjct: 191 FYDAGKPVYCIYVAIGQKASTVAGITKTLEDAGALAYTTIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VINDDTIARQMNDLPESIAPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +
Sbjct: 371 SDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQYRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           D      + +     + LKQ  +D    +
Sbjct: 428 DAATMGVIEKGKRNVEILKQPQNDPYPVE 456


>gi|300858265|ref|YP_003783248.1| ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685719|gb|ADK28641.1| ATP synthase alpha chain [Corynebacterium pseudotuberculosis FRC41]
 gi|302205986|gb|ADL10328.1| F0F1 ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           C231]
 gi|302330539|gb|ADL20733.1| F0F1 ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           1002]
 gi|308276221|gb|ADO26120.1| F0F1 ATP synthase subunit alpha [Corynebacterium pseudotuberculosis
           I19]
          Length = 542

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 106/442 (23%), Positives = 190/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  ++
Sbjct: 65  VAQNLDTDHIGVVVLGNYESLKEGDEVKRTGEVLSIPVGDNFLGRVINPLGQPIDGLGAI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 125 EAEEQRV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +    +        + + +V A + +S 
Sbjct: 184 DTILNQKANWESGDKTKQVRCIYVAIGQKGSTIAAVRKTLEEQGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDEMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFATFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ+ +     +
Sbjct: 421 LDRGARLVELLKQAENAPQPVE 442


>gi|119469988|ref|ZP_01612793.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7]
 gi|119446698|gb|EAW27971.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7]
          Length = 444

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 155/435 (35%), Positives = 241/435 (55%), Gaps = 6/435 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L+Q  ++         G ++ +  +      L     +G     +  N     +++  
Sbjct: 10  ERLSQYQQNIKPYTPAVAGILTRVVGLTLEAKGL--RAPVGSQCKIETMNGFVDAEIVGF 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           N   +Y+ P      +  G  V        +       GRV++ LG+P+DG   +   + 
Sbjct: 68  NDQTLYLMPNDHISGVLPGARVIPQVNNLGLPVGMSLLGRVVDGLGRPLDGLGKIN-AEH 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            ++        + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R 
Sbjct: 127 YLKFAQNTINPLARRPISQPMDVGVRAINSVITVGQGQRMGLFAGSGVGKSVLLGMMTRG 186

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D +++ LVGERGREV+EFIE+ LG+   K+SVVV A +D SP++R     +AVTIAE
Sbjct: 187 SEADVIVVGLVGERGREVKEFIEEILGEEGRKRSVVVAAPADSSPLMRLKGCESAVTIAE 246

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   + 
Sbjct: 247 YFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGGEG 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+  +
Sbjct: 307 QGAITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRELADSGHYPAIDIEKSISRVMPQ 366

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S    +    L  +   +++ +D+  +G Y+ G D +LD+A++ +P +  FL+Q   D
Sbjct: 367 VVSEPHMQQARVLKQVYSMYQQNKDMITLGAYQKGTDPMLDQAINMMPRVNGFLQQGMRD 426

Query: 424 LSSEDV-FQEITKKL 437
           + S D   Q + + L
Sbjct: 427 VISYDDGLQGLAQLL 441


>gi|37680662|ref|NP_935271.1| flagellum-specific ATP synthase [Vibrio vulnificus YJ016]
 gi|37199411|dbj|BAC95242.1| polar flagellum-specific ATP synthase FliI [Vibrio vulnificus
           YJ016]
          Length = 441

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 147/432 (34%), Positives = 232/432 (53%), Gaps = 5/432 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L         +  V  G +  +  +    T       +G   + +        +V+  
Sbjct: 7   ERLKSYRVQGLGSRPVASGKLVRVVGLTLEATG--CRAPIGSLCLVETMTGQMEAEVVGF 64

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + D +++ P      I  G  V        +       GRVI+ +G P+DG   +   + 
Sbjct: 65  SGDNLFLMPSEQIGGILPGAKVTPLTSESGLPVGMELLGRVIDGVGNPLDGLGPIY-TEH 123

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                ++    + R+ + +    G++ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 124 RASFNAEPINPLARKPITEPLDVGLKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRG 183

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFIE+ LG D  K+SVVV A +D SP++R     TA+TIAE
Sbjct: 184 TTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVAAPADASPLMRLKGCQTALTIAE 243

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G    +
Sbjct: 244 YFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPQ 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+  +
Sbjct: 304 QGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQ 363

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + +   +  ++  ++    + +D+  IG Y+PG D  +D A    P + ++L+Q   +
Sbjct: 364 ITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDPSIDSAFTLKPKLDEYLQQRMKE 423

Query: 424 LSSEDVFQEITK 435
                +   + K
Sbjct: 424 TVPYAMCVNMLK 435


>gi|130076686|gb|ABO31963.1| ATPase alpha subunit [Daphniphyllum sp. Qiu 94162]
          Length = 436

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 94/422 (22%), Positives = 173/422 (40%), Gaps = 23/422 (5%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           Y+   V + G + S+      V  L++ +  G+ V      S   G  + +  + V I  
Sbjct: 1   YANLQVDEIGRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVV 56

Query: 75  VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
            G    I  GDLV   G     P      GR ++ALG PIDG  +L   +    +  K P
Sbjct: 57  FGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRTVDALGVPIDGRGALSDHE-RRRVEVKAP 115

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----- 188
             + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +         
Sbjct: 116 GIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRAA 175

Query: 189 ------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
                   +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   +
Sbjct: 176 SESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAM 235

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER     
Sbjct: 236 GEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRS 295

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G++TA+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR
Sbjct: 296 DQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++  S    + ++ E   +  +  +   +D       ++   + +  KQ
Sbjct: 356 VGSAAQLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQ 412

Query: 420 SP 421
             
Sbjct: 413 PQ 414


>gi|6561642|gb|AAF16986.1|AF197654_1 ATPase alpha subunit [Nelumbo nucifera]
          Length = 421

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|3273580|gb|AAC24772.1| F1-ATPase alpha subunit [Anigozanthos flavidus]
          Length = 421

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|164685620|gb|ABY66756.1| atp1 [Mirabilis jalapa]
          Length = 413

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SPKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|157959910|ref|YP_001499944.1| FliI/YscN family ATPase [Shewanella pealeana ATCC 700345]
 gi|157844910|gb|ABV85409.1| ATPase, FliI/YscN family [Shewanella pealeana ATCC 700345]
          Length = 445

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 154/440 (35%), Positives = 240/440 (54%), Gaps = 6/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M+  L+  A + +     +    G ++ +  +      +   +  GD    + ++   + 
Sbjct: 1   MRLTLKFNADILDWPKVPVAQVYGRLTRVNGLLL--EAVGCQLGTGDRCHIECRDKQLVE 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D + + P+     +  G  V    GR  I       GRV++ LG+P+DG   
Sbjct: 59  AEVVGFYKDTLCLMPIEAASGLMPGARVMPIEGRCLIPSGLGILGRVLDGLGQPLDGLGC 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K    + +  K    + R+ +E+    GIR I+   P+  GQR+G+FAGSG+GKS LL
Sbjct: 119 I-KHLPHVPLQHKPTNPLMRKAIEEPLDVGIRAINALLPIGRGQRLGLFAGSGVGKSVLL 177

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M  R    D V++ L+GERGREV+EFI++    +  K++VV+ A +D +P++R  A   
Sbjct: 178 GMMTRFTEADVVVVGLIGERGREVKEFIDESLGEEGRKRAVVIAAPADTTPLMRMRAMRL 237

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              IA  +  +G  VLL++DS+TR+A + REIA + GE P  +GYP S F++LP L+E  
Sbjct: 238 CHHIAATYRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPSLVEMA 297

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  +   G +TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE+G +P +D  ASV
Sbjct: 298 GNGQHPTGTLTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRKLAEKGHFPAIDIGASV 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRLA K  S +  K      HL  R+ E +D+  +GGY+ G D  +D AV   P + +FL
Sbjct: 358 SRLATKVASEETLKQGQWFRHLNSRYNEVKDLLPLGGYQAGHDPEMDMAVSAYPKMAEFL 417

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +QS +  +          +L
Sbjct: 418 RQSTNSQADHAHSITALAQL 437


>gi|6561687|gb|AAF17031.1|AF197699_1 ATPase alpha subunit [Mauloutchia chapelieri]
          Length = 424

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 359 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 411


>gi|1381689|gb|AAB02743.1| F1-ATPase alpha subunit [Phoenix reclinata]
          Length = 425

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 167/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 3   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 58

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 59  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 118 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 178 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 238 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 298 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 358 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 407


>gi|255324525|ref|ZP_05365642.1| ATP synthase F1, alpha subunit [Corynebacterium tuberculostearicum
           SK141]
 gi|255298431|gb|EET77731.1| ATP synthase F1, alpha subunit [Corynebacterium tuberculostearicum
           SK141]
          Length = 546

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 105/442 (23%), Positives = 188/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ + + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 65  VAQNLDTNSIGVVVLGNFESLKEGDEVKRTGEVLSIPVGEEFLGRVINPLGQPIDGMGPI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 125 NAEEERV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +               + +V A + +S 
Sbjct: 184 DTILNQKANWESGDKDKQVRCIYVAIGQKGSTIAGVRRTLEEHGALDYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFSGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++    I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVGAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD++    +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQTKGMKKVAGNLRLDLASY---RDLQAFAAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQS S     +
Sbjct: 421 LERGSRLVELLKQSESSPQPVE 442


>gi|192362186|ref|YP_001982194.1| flagellum-specific ATP synthase [Cellvibrio japonicus Ueda107]
 gi|190688351|gb|ACE86029.1| flagellum-specific ATP synthase FliI [Cellvibrio japonicus Ueda107]
          Length = 476

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 151/424 (35%), Positives = 237/424 (55%), Gaps = 11/424 (2%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           +T++     Y+   +        G I+    +      L+  V +G    +    N    
Sbjct: 19  QTISSRLRRYAPRHLAVTEPQAEGRITRAVGLTLEAVGLN--VSVGRQCEIINSDNRRIE 76

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D V++ PV   E +  G  V    G+  +       GRVIN +G+P+D    
Sbjct: 77  AEVVGFAGDKVFLMPVKRVEGLQPGARVIPVAGQMGMRIGPQLLGRVINGIGQPLDAKGP 136

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  GD  ++   +    + R  + +    G+R I+    +  GQR+G+FAGSG+GKS L+
Sbjct: 137 L-AGDEYLDFNPRDINPLQRHPISETLDVGVRAINALITVGRGQRLGLFAGSGVGKSVLM 195

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M  +    D V++ L+GERGREV+EFI      + L+++VVV + +D++P++R  A L 
Sbjct: 196 GMMTKFTTADIVVVGLIGERGREVKEFIDHILGEEGLRRAVVVASPADDAPLMRLRASLL 255

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEY+  +G NVLL++DS+TRFA + REIA   GE P  +GYP SVF+++P+L+ER 
Sbjct: 256 ASRIAEYYRDQGQNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKIPQLVERA 315

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G + + +G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAEEG YP +D  +S+
Sbjct: 316 GNAAEGEGSITAFYTVLTEGDDLQDPIADSARAILDGHVVLSRRLAEEGVYPAIDVESSI 375

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR        +  K++     L+ R+++ RD+  IG Y  G D   D A+ + P +  F+
Sbjct: 376 SRAMQNIVDDEHLKMMQRFKQLLARYQQNRDLIAIGAYTQGADPETDAAIERFPHLRAFI 435

Query: 418 KQSP 421
           +Q  
Sbjct: 436 QQGI 439


>gi|269140872|ref|YP_003297573.1| F0F1-type ATP synthase, alpha subunit [Edwardsiella tarda EIB202]
 gi|267986533|gb|ACY86362.1| F0F1-type ATP synthase, alpha subunit [Edwardsiella tarda EIB202]
 gi|304560630|gb|ADM43294.1| ATP synthase alpha chain [Edwardsiella tarda FL6-60]
          Length = 513

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-EHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   VG++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAVDAIINQRDSGIKCIYVAVGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|145301174|ref|YP_001144015.1| F0F1 ATP synthase subunit alpha [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|190358227|sp|A4STP5|ATPA_AERS4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|142853946|gb|ABO92267.1| F0F1 ATP synthase subunit alpha [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 513

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 189/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYS-----KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +        K+     G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEIAELIKQRIAQFDVKSEARNEGTIVSVSDGIIRIHGLAD-AMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G  + +S G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFALALNLERDSVGAVIMGSYDGLSEGMKVKGTGRILEVPVGRGLLGRVLNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  + R+ V++  +TG++ ID   P+  GQR  +     +GK
Sbjct: 117 GKGPV-ENDGFSPIEVIAPGVIERKSVDQPVQTGLKAIDAMIPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D   K +   +G++   +   +           ++VVVA++ E+  L+
Sbjct: 176 TAIAIDTIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 TSQLFNSGIRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + +KQ      S
Sbjct: 413 LDEATRKQLDHGVKVTELMKQKQYSPMS 440


>gi|55824784|gb|AAV66474.1| F1-ATPase alpha subunit [Campanula garganica]
          Length = 424

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKALLGRVVDALGLPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              VG++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAVGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKI 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 405


>gi|34539171|gb|AAQ74469.1| F1-ATPase alpha subunit [Alania endlicheri]
          Length = 417

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRSTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + + LKQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVLKQPQ 401


>gi|6561683|gb|AAF17027.1|AF197695_1 ATPase alpha subunit [Annona muricata]
          Length = 418

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 95/416 (22%), Positives = 174/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVI 191
           +  +TG++ +D   P+  GQR  +      GK      T+L+    +   +        +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGNSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|6561685|gb|AAF17029.1|AF197697_1 ATPase alpha subunit [Knema latericia]
          Length = 420

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|218249447|ref|YP_002374811.1| flagellar protein export ATPase FliI [Borrelia burgdorferi ZS7]
 gi|226321606|ref|ZP_03797132.1| flagellar protein export ATPase FliI [Borrelia burgdorferi Bol26]
 gi|218164635|gb|ACK74696.1| flagellar protein export ATPase FliI [Borrelia burgdorferi ZS7]
 gi|226232795|gb|EEH31548.1| flagellar protein export ATPase FliI [Borrelia burgdorferi Bol26]
          Length = 436

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 159/440 (36%), Positives = 250/440 (56%), Gaps = 9/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     V   G +  I  +   V  L     +GD  +   +N   + 
Sbjct: 1   MSNFFENYLRQVDDIET--VSFVGRVQKIKGLL--VESLGPQCAIGDLCLIDQRNGKKVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                    I  K+ P +NR   E    TG++V+D F P+  GQR+G+F+GSG+GKSTLL
Sbjct: 117 FLNNSYKELIFEKINP-INRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R      
Sbjct: 176 GMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G +V L+ DSITRFA++ RE++ + GE PVA+GYP SVF E+P LLER 
Sbjct: 236 ATMIAEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++T   +VLV+GD+  +P+AD+++++LDGHI+L+R L + G YP ++ L+S 
Sbjct: 296 G-FNGNGGSVTGFYTVLVEGDDFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  S +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I +F+
Sbjct: 355 SRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFI 414

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q  ++    +  ++  K++
Sbjct: 415 SQGINETFDFENLEDEIKEI 434


>gi|156936114|ref|YP_001440030.1| F0F1 ATP synthase subunit alpha [Cronobacter sakazakii ATCC
           BAA-894]
 gi|166201664|sp|A7MMX1|ATPA_ENTS8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|156534368|gb|ABU79194.1| hypothetical protein ESA_04008 [Cronobacter sakazakii ATCC BAA-894]
          Length = 513

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVENFTKGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|289766053|ref|ZP_06525431.1| ATP synthase F1 sector subunit alpha [Fusobacterium sp. D11]
 gi|289717608|gb|EFD81620.1| ATP synthase F1 sector subunit alpha [Fusobacterium sp. D11]
          Length = 453

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 168/389 (43%), Gaps = 13/389 (3%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ +         +G  + +  D V    +G    I  GD V   G+    P      GR
Sbjct: 3   GELLEFP---HGVMGMALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPTGDELLGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           VINALG PIDG   +   D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 60  VINALGDPIDGKGEI-HADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221
            +      GK+ +      +      K I   +G++   V +  +          +++V 
Sbjct: 119 LIIGDRQTGKTAIAIDTIINQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLGCMDYTIIVA 178

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ E+  L+ MAP + V I EYF  +G++VL+I D +++ A + RE++      P    
Sbjct: 179 ATASEAAPLQYMAPYSGVAIGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREA 238

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E   G+ITA+  +     + +  I  +V SI DG I L 
Sbjct: 239 YPGDVFYLHSRLLERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLE 298

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     K++ S +   + ++ E   +     +   +
Sbjct: 299 SQLFNSGFRPAINAGISVSRVGGAAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDL 355

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           D      + +   I + LKQ      S +
Sbjct: 356 DKATKAQLERGHRIMEILKQPQYHPFSVE 384


>gi|54308119|ref|YP_129139.1| flagellum-specific ATP synthase [Photobacterium profundum SS9]
 gi|46912545|emb|CAG19337.1| putative polar flagellum-specific ATP synthase FliI [Photobacterium
           profundum SS9]
          Length = 440

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 144/431 (33%), Positives = 234/431 (54%), Gaps = 5/431 (1%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            L+Q          +  G +  +     T+  +     +G   + +  N D   +V+  +
Sbjct: 8   RLSQYQTKGIACRPIASGRLVRVVG--LTLEAIGCRAPVGSLCIVETLNGDLEAEVVGFS 65

Query: 67  LDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            +I+++ P      +  G  V        +       GRVI+ +G P+DG   +   +  
Sbjct: 66  GEILFLMPSEQLLGVMPGAKVTPVLHDNGLPVGPELLGRVIDGVGNPLDGLGDIF-TEKR 124

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
               S     + R+ +++    GI+ I+    +  GQRIG+FAGSG+GKS  L M  R  
Sbjct: 125 ASFTSPAINPLLRKPIKEPLDVGIKAINGLLSVGKGQRIGLFAGSGVGKSVTLGMMTRGT 184

Query: 186 CFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
               V++ L+GERGREV+EFI++ LG+   K++VV+ A +D SP++R     TA+TIAEY
Sbjct: 185 TAQVVVVGLIGERGREVKEFIDEILGEEGRKRAVVIAAPADTSPLMRLKGCQTALTIAEY 244

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G    ++
Sbjct: 245 FRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGSGDQ 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+    
Sbjct: 305 GSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAI 364

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P +  +L+Q   + 
Sbjct: 365 VDDEHMLMSKAVRQILSICRKNQDLVSIGAYKPGTDPTIDQAFSFKPKLDAYLQQEMKES 424

Query: 425 SSEDVFQEITK 435
               +   + +
Sbjct: 425 VPYAMCVNMLR 435


>gi|158430724|pdb|2R9V|A Chain A, Crystal Structure Of Atp Synthase Subunit Alpha (Tm1612)
           From Thermotoga Maritima At 2.10 A Resolution
          Length = 515

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/430 (21%), Positives = 175/430 (40%), Gaps = 14/430 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  + + + + ++  G +  +         L++ V + + V          G    
Sbjct: 22  KVLEEKIKSFEEKIDLEDTGKVIQVGDGIARAYGLNK-VXVSELVEFVETG--VKGVAFN 78

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I  +G  ++I  G  V    R   +       GRV+N LG+P+DG   +   +
Sbjct: 79  LEEDNVGIIILGEYKDIKEGHTVRRLKRIIEVPVGEELLGRVVNPLGEPLDGKGPINAKN 138

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P  + R+ V+   +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 139 FR-PIEIKAPGVIYRKPVDTPLQTGIKAIDSXIPIGRGQRELIIGDRQTGKTAIAIDTII 197

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   +   I+        + + VVVA++ +   L+ +AP     
Sbjct: 198 NQKGQGVYCIYVAIGQKKSAIARIIDKLRQYGAXEYTTVVVASASDPASLQYIAPYAGCA 257

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
             EYF+  G + L++ D +++ A + R+++      P    YP  +F    RLLER    
Sbjct: 258 XGEYFAYSGRDALVVYDDLSKHAVAYRQLSLLXRRPPGREAYPGDIFYLHSRLLERAVRL 317

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G++TA+  V    ++ +  I  +V SI DG I L   L   G+ P ++   SVS
Sbjct: 318 NDKLGGGSLTALPIVETQANDISAYIPTNVISITDGQIYLEPGLFYAGQRPAINVGLSVS 377

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + ++ E         +   +D      + +   + + LK
Sbjct: 378 RVGGSAQIKAXKQVAGXLRIDLAQYRELETFAQ---FATELDPATRAQIIRGQRLXELLK 434

Query: 419 QSPSDLSSED 428
           Q        +
Sbjct: 435 QEQYSPXPVE 444


>gi|284989553|ref|YP_003408107.1| flagellar protein export ATPase FliI [Geodermatophilus obscurus DSM
           43160]
 gi|284062798|gb|ADB73736.1| flagellar protein export ATPase FliI [Geodermatophilus obscurus DSM
           43160]
          Length = 435

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 158/401 (39%), Positives = 241/401 (60%), Gaps = 5/401 (1%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVH-QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           + ++  T++       +GD V      +   L +V+ ++ + +   P+G    +  G  V
Sbjct: 22  VGAMGLTLSVEGAVAAVGDLVEINPSPSGGLLAEVVAVSRERLTCMPLGELSGVHAGARV 81

Query: 88  FHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G   ++       GRV++ LG+P+DG   L +    +++ S+ P A+ R RVE+   
Sbjct: 82  RATGMPLQVPVGEALLGRVLDGLGRPVDGGPPLDQSLEFVDLASETPHALARTRVEEPLA 141

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           +G+RV+D   PL  GQR+G+FAGSG+GKSTLL+   R    D  +I L+GERGREVREF+
Sbjct: 142 SGVRVLDTMVPLGKGQRLGIFAGSGVGKSTLLAQITRGTDADVRVIGLIGERGREVREFL 201

Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
           E+ LG + + ++VVVVATSDE P++R  A   A  IAE F  +G +VLL++DSITR A +
Sbjct: 202 EENLGAEGMARTVVVVATSDEPPLVRLKAAFVATRIAEGFRDQGRDVLLMMDSITRTAMA 261

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            RE+  ++GE P  RGYP SVF+ +P+LLE+ G +    G+IT + +VLVDGD+HN+PIA
Sbjct: 262 QREVGLSAGEPPATRGYPPSVFAMMPKLLEKAGTAAV--GSITGLYTVLVDGDDHNEPIA 319

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D+ RSILDGH+VL R LA  G +P +D L S+SR+A       +      +  L+    +
Sbjct: 320 DTARSILDGHVVLTRKLATAGHFPAIDVLESISRVATAVVPPAQMADAREVRRLMGALRD 379

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +++  IG Y+ G D ++D+A    P I  FL+Q   +L+ 
Sbjct: 380 VKELIEIGAYQAGTDPLVDRARQLAPAIESFLQQPTGELTP 420


>gi|164685592|gb|ABY66742.1| atp1 [Frasera caroliniensis]
          Length = 413

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|39546129|gb|AAR28048.1| ATP synthase alpha subunit [Liriodendron tulipifera]
          Length = 423

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  +Q   + 
Sbjct: 359 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPQQPQYEP 411


>gi|332533123|ref|ZP_08408992.1| flagellum-specific ATP synthase FliI [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037405|gb|EGI73859.1| flagellum-specific ATP synthase FliI [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 444

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 156/435 (35%), Positives = 242/435 (55%), Gaps = 6/435 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L+Q  +          G ++ +  +      L     +G     +  N     +++  
Sbjct: 10  ERLSQYQQHIKTPAPAVAGILTRVVGLTLEARGL--RAPVGSQCKIETMNGFVDAEIVGF 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           N   +Y+ P      +  G  V        +       GRV++ LG+P+DG   +   + 
Sbjct: 68  NDQTLYLMPNDHISGVLPGARVIPQVNNLGLPVGMSLLGRVVDGLGRPLDGLGKIN-AEH 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            ++        ++R+ + K    G+R I+    +  GQR+G+FAGSG+GKS LL M  R 
Sbjct: 127 HLKFAQNTINPLSRRPITKPMDVGVRAINSVITVGQGQRMGLFAGSGVGKSVLLGMMTRG 186

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D +++ LVGERGREV+EFIE+ LG +  K+SVVV A +D SP++R     +AVTIAE
Sbjct: 187 SEADVIVVGLVGERGREVKEFIEEILGVEGRKRSVVVAAPADSSPLMRLKGCESAVTIAE 246

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   + 
Sbjct: 247 YFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGGEG 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+  +
Sbjct: 307 QGSITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRDLADSGHYPAIDIEKSISRVMPQ 366

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S    +    L  +   +++ +D+  +G Y+ G D +LD+A++ +P +  FL+Q   D
Sbjct: 367 VVSEPHMQQARVLKQVYSMYQQNKDMITLGAYQKGTDQMLDQAINMMPRVNAFLQQGMRD 426

Query: 424 LSSEDV-FQEITKKL 437
           + S D   Q + + L
Sbjct: 427 VISYDDGLQGLAQLL 441


>gi|256827615|ref|YP_003151574.1| ATP synthase F1 subcomplex alpha subunit [Cryptobacterium curtum
           DSM 15641]
 gi|256583758|gb|ACU94892.1| ATP synthase F1 subcomplex alpha subunit [Cryptobacterium curtum
           DSM 15641]
          Length = 524

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 110/439 (25%), Positives = 180/439 (41%), Gaps = 30/439 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNL 59
           ++K L+ L    E        + G +  +      +  L +    G+ +   G       
Sbjct: 15  LRKQLDALDTSVE------AREVGTVIQVGDGIARIDGL-KDAMAGELLEFTGSAGQIVY 67

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G    +  + V    +G    I   D V   GR   I      CGRV+NALG PIDG   
Sbjct: 68  GMAQNLEEEEVGAVLLGDVTAIKENDQVKTTGRIVEIPVGPAMCGRVVNALGMPIDGKGP 127

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K   +  +  K P  ++RQ V +  +TGI  +D   P+  GQR  +      GK+ + 
Sbjct: 128 I-KTTATRPVEFKAPGVISRQPVSEPMQTGILAVDSMIPIGRGQRELIIGDRQTGKTAIA 186

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
             ++  + D     I   VG++   V   +E          ++VV AT+ +S  L+ +AP
Sbjct: 187 IDAIINQKDQNMICIYVAVGQKASTVAGIVETLERHGAMDYTIVVSATAADSAPLQYLAP 246

Query: 236 LTAVTIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +    I EYF   G             +VL I D +++ A + R+++      P    YP
Sbjct: 247 MVGAAIGEYFIYNGKDGKPASKDNPGGHVLAIYDDLSKQAVAYRQMSLTLRRPPGREAYP 306

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 307 GDVFYLHSRLLERAVKMSDENGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLVTD 366

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G+ P VD   SVSR+   A +   K++  SL   +  + E +       +   +D 
Sbjct: 367 LFFQGQRPAVDVGISVSRVGGSAQTKAMKQVAGSLRLDLAAYRELQ---AFTQFGSDLDK 423

Query: 402 ILDKAVHQVPIIYDFLKQS 420
              + + +   + + LKQ 
Sbjct: 424 STQQQLSRGARMTELLKQG 442


>gi|164685660|gb|ABY66776.1| atp1 [Euonymus americanus]
          Length = 413

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQTLLNRGARLTEVPKQPQ 399


>gi|34539193|gb|AAQ74480.1| F1-ATPase alpha subunit [Aratitiyopea lopezii]
          Length = 410

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 166/405 (40%), Gaps = 23/405 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L+Q +  G+ V      S   G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVYGLNQ-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGNDTAIKEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKALLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTNESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILTEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 397


>gi|27461561|gb|AAM95197.1| ATPase F1 alpha subunit [Tillandsia usneoides]
          Length = 416

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTTIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N    S++V AT  +    + +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANAMEYSILVAATXSDPAPXQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|284041349|ref|YP_003391279.1| ATP synthase F1 subunit alpha [Spirosoma linguale DSM 74]
 gi|283820642|gb|ADB42480.1| ATP synthase F1, alpha subunit [Spirosoma linguale DSM 74]
          Length = 524

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 101/441 (22%), Positives = 167/441 (37%), Gaps = 36/441 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   ++  + + G +  I      +  LS+ V  G+ +             + +  D 
Sbjct: 16  QLAGTQTEAELEEVGTVLQIGDGVARIYGLSK-VQAGELLSFDNG---LQAMALNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +G   EI  GD V    +   ++      GRV+N LG PIDG   +      M +
Sbjct: 72  VGAVLLGDYSEIKEGDTVKRTDQIAYVNVGDGILGRVVNTLGLPIDGLGPIQGELYQMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      +    
Sbjct: 132 ERKAPGVIFRQPVTEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTIINQKEF 191

Query: 189 K-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I    G++   V++  +          +V+V A + +   ++  AP T   
Sbjct: 192 YDKGQPVFCIYVACGQKASTVKQVEQTLRKAGAMDYTVIVAANASDPSPMQFFAPFTGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E+F   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEFFRDTGRPALVVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKI 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 NANDDIAKTMNDLPPSLKDRVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +D
Sbjct: 372 NLFNSGIRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                 + +     + LKQ  
Sbjct: 429 ASTKLTIERGRRNQEMLKQPQ 449


>gi|149244882|ref|XP_001526984.1| ATP synthase alpha chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449378|gb|EDK43634.1| ATP synthase alpha chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 448

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 162/382 (42%), Gaps = 18/382 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +        +  G+ V   G+   +       GRV++ LG PIDG   +
Sbjct: 1   MALNLEADQVGVVLFDSDRLVKEGETVKRTGQIVSVPVGPELLGRVVDGLGNPIDGKGPI 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                +     K P  + R  V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  N-AKATSRAQVKAPGILPRTSVHEPMQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
             +L+    ++  D       +   VG++   V + ++     D LK SV+V AT+ E+ 
Sbjct: 120 DAILNQKRWNNGSDEKKKLYCVYVAVGQKRSTVAQLVQTLEQNDALKYSVIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP T   I E+F   G + L++ D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYIAPFTGTAIGEWFRDNGKHALIVFDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +  G  ++TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKMNESNGAGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   +   LKQ      S +
Sbjct: 357 LARGERLTQILKQKQYHPLSAE 378


>gi|15827574|ref|NP_301837.1| F0F1 ATP synthase subunit alpha [Mycobacterium leprae TN]
 gi|221230051|ref|YP_002503467.1| F0F1 ATP synthase subunit alpha [Mycobacterium leprae Br4923]
 gi|1168567|sp|P45825|ATPA_MYCLE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808108|sp|B8ZR40|ATPA_MYCLB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|699348|gb|AAA63109.1| atpA [Mycobacterium leprae]
 gi|13093124|emb|CAC31524.1| ATP synthase [alpha] chain [Mycobacterium leprae]
 gi|219933158|emb|CAR71238.1| ATP synthase [alpha] chain [Mycobacterium leprae Br4923]
          Length = 558

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 99/443 (22%), Positives = 177/443 (39%), Gaps = 27/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  + + +    E+Y  +        + G +  +      V  L   V   + +   G  
Sbjct: 4   LTISADDIQNAIEEYVSSFTADTFREEVGTVVDVGDSIAHVEGL-PSVMTQELLEFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + ++   V    +G  E I  G  V   G    +     + GRV+N LG+PID
Sbjct: 62  --ILGVALNLDEHNVGAVILGDFENIKEGQKVKRTGDVLSVPVGEAFMGRVVNPLGQPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +    +  + P  + RQ V++  +TGI+ ID  TP+  GQR  V      GK
Sbjct: 120 GRGDI-EAEARRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+L+     +  D     + +   +G++G  +               + +V A 
Sbjct: 179 TAVCVDTILNQRQNWESGDPKRQVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAAL 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP T   IA+++   G +VL++ D +T+ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPYTGSAIAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER          G++T +  +    ++ +  I  +V SI DG   L   
Sbjct: 299 GDVFYLHSRLLERCAKLADHLGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELE---AFAAFASDLDA 415

Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424
                + +   + + LKQ     
Sbjct: 416 TSKAQLERGARLVELLKQPQYQP 438


>gi|188535585|ref|YP_001909382.1| F0F1 ATP synthase subunit alpha [Erwinia tasmaniensis Et1/99]
 gi|259910318|ref|YP_002650674.1| F0F1 ATP synthase subunit alpha [Erwinia pyrifoliae Ep1/96]
 gi|226739884|sp|B2VCA6|ATPA_ERWT9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|188030627|emb|CAO98523.1| ATP synthase, F1 complex, alpha subunit [Erwinia tasmaniensis
           Et1/99]
 gi|224965940|emb|CAX57473.1| ATP synthase, F1 complex, alpha subunit [Erwinia pyrifoliae Ep1/96]
 gi|283480441|emb|CAY76357.1| ATP synthase F1, alpha subunit [Erwinia pyrifoliae DSM 12163]
 gi|310765898|gb|ADP10848.1| F0F1 ATP synthase subunit alpha [Erwinia sp. Ejp617]
          Length = 513

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMTVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +      N    ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|164685588|gb|ABY66740.1| atp1 [Eucommia ulmoides]
          Length = 407

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|164685598|gb|ABY66745.1| atp1 [Garrya elliptica]
          Length = 413

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      SD  G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SDVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|325125457|gb|ADY84787.1| ATP synthase alpha subunit [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 503

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 109/424 (25%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +   + +          G    
Sbjct: 10  SLIKQQLEHYDDKLDIEEVGVVTYVGDGIARAHGLNNVLS-SELLQFDNG---AYGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGKFDDIREGDRVKRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+   + ++ 
Sbjct: 125 KTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP + + 
Sbjct: 185 NQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVEAGPSEPAPMLYIAPYSGIA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +  +  + +  I  +V SI DG I L   L   G  P +D  ASVS
Sbjct: 305 SKELGGGSLTALPVIQTEAGDISAYIPTNVISITDGQIFLQSDLFFSGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG---SDLDQATQAKLARGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|164685618|gb|ABY66755.1| atp1 [Krameria lanceolata]
          Length = 413

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S  +G  + +  D V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGMIGMTLNLENDNVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG P+DG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPLDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESEKLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSIIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     KK+  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKKVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|3273604|gb|AAC24784.1| F1-ATPase alpha subunit [Eriocaulon aquaticum]
          Length = 420

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 163/408 (39%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEF---TSGVKGIAFNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKGTESETLYCVYVAIG 176

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++          S++V AT+ +   L+ +AP +   + E F     + L+I
Sbjct: 177 QKRSTVAQLVQILEEAMAMEYSILVAATASDPAPLQFLAPYSGCAMGEDFRDNRMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|237735235|ref|ZP_04565716.1| ATP synthase subunit alpha [Mollicutes bacterium D7]
 gi|229380980|gb|EEO31071.1| ATP synthase subunit alpha [Coprobacillus sp. D7]
          Length = 507

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/440 (23%), Positives = 185/440 (42%), Gaps = 19/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + ++ L ++  K+      +   G + ++      +  L     LG+ +      
Sbjct: 1   MGLRPDEISALIKEQIKHFDDVIELKDVGTVMTVGDGVSLIHGL-DNAMLGELLAFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            D  G V+ ++ D V    +G    I  GD V   G+   I       GRV+N LG+ ID
Sbjct: 58  -DVYGMVMNLDEDCVGAVLLGSESTIKEGDEVKRTGKIMEIPVGDEMLGRVVNPLGQAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G+  +     +  I       M R+ V++  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GNGEIITA-HTRPIERVASGVMTRKSVDQPLQTGITSIDAIIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILR 231
           + +   ++  + D     +   +G++   V + +E    G  ++ + VV A++ E   ++
Sbjct: 176 TAIAIDTILNQKDQDIYCVYVAIGQKNSTVAQIVEKLRKGGAMEYTTVVSASASELAPVQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     IAE +  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYAGCAIAEEWLDQGKDVLIVYDDLSKHAVAYRTVSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER     +E   G+ITA+  +     + +  I  +V SI DG I L + L   G  P
Sbjct: 296 RLLERACRLNEENGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLQQELFNAGFRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     K++  SL   + ++ E +       +   +D      +  
Sbjct: 356 AIDTGLSVSRVGSAAQIKAMKQVSGSLKLELAQYAEMQ---AFAQFGSDLDAATKATLDH 412

Query: 410 VPIIYDFLKQSPSDLSSEDV 429
              + + LKQ+     +   
Sbjct: 413 GAKVREVLKQAQYSPRTVST 432


>gi|130076682|gb|ABO31961.1| ATPase alpha subunit [Corylopsis glabrescens f. gotoana]
          Length = 426

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/412 (22%), Positives = 169/412 (41%), Gaps = 23/412 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 KQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 404


>gi|6561680|gb|AAF17024.1|AF197692_1 ATPase alpha subunit [Eupomatia bennettii]
          Length = 418

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|332876897|ref|ZP_08444651.1| ATP synthase F1, alpha subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685180|gb|EGJ58023.1| ATP synthase F1, alpha subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 526

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 106/449 (23%), Positives = 169/449 (37%), Gaps = 36/449 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   +   + + G +  +      +  LS     G+ V          G V+ +  D
Sbjct: 15  EQLAHFDANASLEEVGTVLQVGDGIARIFGLS-NAQYGELVKFDNG---LKGIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +G   +I  GD+V   G    I+      GRV+N LG+PIDG   L      M 
Sbjct: 71  NVGITLLGPSTDIKEGDIVKRTGLIASINVGEGIVGRVVNTLGQPIDGKGPLTGQLYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TG++ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIFRQPVNEPLQTGVKAIDAMIPIGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          + +V A + +   ++  AP    
Sbjct: 191 FYDAGKPVYCIYVAIGQKASTVAGITKTLEDAGALAYTTIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VIGDDAIARQMNDLPESIAPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +
Sbjct: 371 SDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQYRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           D      + +     + LKQ  SD    +
Sbjct: 428 DAATMGVIEKGKRNVEILKQPQSDPYPVE 456


>gi|325286298|ref|YP_004262088.1| ATP synthase subunit alpha [Cellulophaga lytica DSM 7489]
 gi|324321752|gb|ADY29217.1| ATP synthase subunit alpha [Cellulophaga lytica DSM 7489]
          Length = 526

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/453 (22%), Positives = 171/453 (37%), Gaps = 37/453 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q    +  +  + + G +  +         L+     G+ V  +G      G V+ 
Sbjct: 11  AILKQQLSGFDASASLDEVGSVLQVGDGIVRAYGLA-NAQYGELVEFEGG---LEGIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I  +G  + +  G  V    R   +       GRV++ LG PIDG   +    
Sbjct: 67  LEEDNVGIVLLGGSKGVKEGSTVKRTNRIASVKVGEGIVGRVVDTLGNPIDGKGPIAGET 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK+T+      
Sbjct: 127 YEMPLERKAPGVVYREPVTEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKTTVCIDAIL 186

Query: 184 SDCF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +             I   VG++   V    +          + +V A + +   ++  AP
Sbjct: 187 NQKEFYDAGNPVYCIYVAVGQKASTVALIAKTLEEKGALAYTTIVAANASDPAAMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T  +I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 247 FTGASIGEYFRDTGRPALIVFDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RSARVINDDSIAKDMNDLPESLKPMVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVSGTLKLDQAQYRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +D      + +     + LKQ+ +D  + +
Sbjct: 424 GSDLDASTLNVIEKGKRNVEILKQAQNDPYTVE 456


>gi|34539385|gb|AAQ74576.1| F1-ATPase alpha subunit [Neomarica northiana]
          Length = 409

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 23/405 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V+ L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVSGLNE-IQAGEMVXFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G   L+I D 
Sbjct: 176 STVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMQALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 397


>gi|164685574|gb|ABY66733.1| atp1 [Amoreuxia wrightii]
          Length = 413

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDPATQALLNRGARLTEVPKQPQ 399


>gi|85858820|ref|YP_461022.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB]
 gi|85721911|gb|ABC76854.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB]
          Length = 455

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 144/421 (34%), Positives = 229/421 (54%), Gaps = 7/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +   G +S I  +   V        +G+   +    +     +V+      V + P+   
Sbjct: 30  IKVYGRVSEIVGLV--VEGQGPAASIGEMCSLLPHDSKPVFAEVVGFKKGKVILMPLEEV 87

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  +   G+   +   A   GRVI+ +G PID    +   +    + ++    + 
Sbjct: 88  QGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTEE-EYPLYAEPINPLA 146

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R+      G++V++       GQR+G+FAGSG+GKS L+ M AR+   D  +I L+GE
Sbjct: 147 RGRISDPIDFGVKVLNGLFSCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGE 206

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREF+E  LG + L +SVVVVA SD  P++R  A   A T++EYF  +G +VLL++
Sbjct: 207 RGREVREFLEKNLGKEGLARSVVVVAASDMHPLIRMRAAHVATTVSEYFRDQGRDVLLMV 266

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI  + GE P  +GY  SVFS LP+LLER G  E  +G+IT + ++LV+
Sbjct: 267 DSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEG-RGSITGLYTILVE 325

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI+D+ RSILDGH+ L+R LA +  YP VD L S+SR+     S   + + + +
Sbjct: 326 GDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRI 385

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             +I   ++  ++  IG Y  G +  +D A+  +  + DFL+Q   +    +    +   
Sbjct: 386 LSIIAAHKKAEELINIGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHERFDAEQTAGMMAA 445

Query: 437 L 437
            
Sbjct: 446 F 446


>gi|228015983|gb|ACP50822.1| ATP synthase CF1 alpha subunit [Pinus resinosa]
          Length = 507

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/424 (24%), Positives = 176/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGXXXXXXXE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|56384657|gb|AAO59387.2| F1-ATPase alpha subunit [Brassica juncea]
          Length = 429

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/425 (23%), Positives = 173/425 (40%), Gaps = 28/425 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +      L  L E   +N          G + S+      V  L++ +  G+ V+     
Sbjct: 3   LSPRAAELTNLFESRIRNFYANFQVDEIGRVVSVGDGIAQVYGLNE-IQAGEMVLFANG- 60

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
               G  + +  + V I   G    I  GDLV   G     P      GRV++A+G PID
Sbjct: 61  --VKGMALNLENENVGIVVFGGDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 119 GRGALSDHEQRR-VEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGK 177

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           +T+      +                 +   +G++   V + I+     N  + S++V A
Sbjct: 178 TTIAIDTILNQKQINSRATSESETMYCVYVAIGQKRSTVGQLIQTLEEANALEYSILVAA 237

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P     
Sbjct: 238 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAS 297

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 298 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 358 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLD 414

Query: 401 LILDK 405
            + +K
Sbjct: 415 ALYEK 419


>gi|302659541|ref|XP_003021459.1| hypothetical protein TRV_04432 [Trichophyton verrucosum HKI 0517]
 gi|291185360|gb|EFE40841.1| hypothetical protein TRV_04432 [Trichophyton verrucosum HKI 0517]
          Length = 497

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 170/407 (41%), Gaps = 22/407 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  +   V   + V      S   G  + +    V +   G    +  G+ V   G
Sbjct: 25  GIARVHGM-HNVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTG 80

Query: 92  RFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
               +       GRV++ALG PIDG   +   +       K P  + R+ V +  +TG++
Sbjct: 81  EIVDVPVGPELLGRVVDALGNPIDGKGPIKSAEKRRA-QVKAPGILPRKSVNQPVQTGMK 139

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGERGR 200
            +D   P+  GQR  +      GK      T+L+    +   D       +   VG++  
Sbjct: 140 CVDSMVPIGRGQRELIIGDRQTGKTAVALDTMLNQKRWNSSNDETKKLYCVYVAVGQKRS 199

Query: 201 EVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   G + L+I D +
Sbjct: 200 TVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGCAMGEWFRDNGRHALIIYDDL 259

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVLVDG 317
           ++ A + R+++      P    YP  VF    RLLER        + G++TA+  +   G
Sbjct: 260 SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDTHKGGSLTALPVIETQG 319

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A     K++  SL 
Sbjct: 320 GDVSAYIPTNVISITDGQIFLESELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGSLK 379

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             + ++ E   +     +   +D    + +++   + + LKQ     
Sbjct: 380 LFLAQYRE---VAAFAQFGSDLDASTKQTLNRGLRLTELLKQKQYQP 423


>gi|283785711|ref|YP_003365576.1| flagellum-specific ATP synthase [Citrobacter rodentium ICC168]
 gi|282949165|emb|CBG88773.1| flagellum-specific ATP synthase [Citrobacter rodentium ICC168]
          Length = 456

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 163/429 (37%), Positives = 238/429 (55%), Gaps = 19/429 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   V +     +  +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCVIERLEGNETREVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              E I  G  V+         H G+ ++       GRV++  GKP+DG  S    + + 
Sbjct: 83  EEVEGILPGARVYAKNIASEGLHSGK-QLPLGPALLGRVLDGSGKPLDGLPSPDTTE-TG 140

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            ++++    + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR   
Sbjct: 141 ALITQPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTR 200

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F
Sbjct: 201 ADVIVVGLIGERGREVKDFIENILGADGRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 260

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 261 RDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGG 320

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      
Sbjct: 321 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALI 380

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           S      V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + +
Sbjct: 381 SEQHYAKVRQFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEAFLQQGIFERA 440

Query: 426 S-EDVFQEI 433
             ED  Q +
Sbjct: 441 DWEDSLQAL 449


>gi|170729218|ref|YP_001763244.1| F0F1 ATP synthase subunit alpha [Shewanella woodyi ATCC 51908]
 gi|226739940|sp|B1KQ36|ATPA_SHEWM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169814565|gb|ACA89149.1| ATP synthase F1, alpha subunit [Shewanella woodyi ATCC 51908]
          Length = 513

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYASLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPID-NDGFSPVEMIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKDTGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRSALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|325091408|gb|EGC44718.1| ATP synthase subunit alpha [Ajellomyces capsulatus H88]
          Length = 466

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 163/380 (42%), Gaps = 18/380 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +    V +   G    +  G+ V   G    +       GRVI+ALG PID
Sbjct: 14  SGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVPVGPELLGRVIDALGNPID 73

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K         K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 74  GKGPI-KAKEKRRAQLKAPGILPRRSVNQPVQTGLKCVDSMVPIGRGQRELIIGDRQTGK 132

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVAT 223
                  +L+    +D  D       +   VG++   V + ++    ++  K S+VV AT
Sbjct: 133 TAVALDAMLNQKRWNDTNDESKKLYCVYVAVGQKRSTVAQLVKTLEENDAMKYSIVVAAT 192

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + E+  L+ +AP T   + E+F   G + L+  D +++ A + R+++      P    YP
Sbjct: 193 ASEAAPLQYIAPFTGCAVGEWFRDNGRHALITYDDLSKQAVAYRQMSLLLRRPPGREAYP 252

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER          G++TA+  +   G + +  I  +V SI DG I L   
Sbjct: 253 GDVFYLHSRLLERAAKLNDNHKGGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAE 312

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 313 LFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDA 369

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              + +++   + + LKQ  
Sbjct: 370 STKQTLNRGERLTELLKQKQ 389


>gi|319936637|ref|ZP_08011050.1| ATP synthase subunit alpha [Coprobacillus sp. 29_1]
 gi|319808194|gb|EFW04759.1| ATP synthase subunit alpha [Coprobacillus sp. 29_1]
          Length = 510

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 179/434 (41%), Gaps = 20/434 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ ++      E          G + +I      V  L     LG+ ++      D  G
Sbjct: 15  IKEQIKHFNDQIESKD------IGTVMTIGDGVSLVHGL-DNAMLGELLLFPN---DVYG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G    I  GD V   G+   +       GRV+N LG+PIDG   +
Sbjct: 65  MVMNLEEDSVGAVLLGSEGTIKEGDEVKRTGKIIEVPVGDGLLGRVVNPLGQPIDGQGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +  I       M R+ V++  +TGI  ID   P+  GQR  +      GK+ +  
Sbjct: 125 VSSK-TRPIERVASGVMTRKSVDQPLQTGITSIDAIIPIGRGQRELIIGDRQTGKTAIAI 183

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
               +        +   +G++   V + +E    G  ++ + +V A + E   ++ +AP 
Sbjct: 184 DTILNQKGQNIYCVYVAIGQKNSTVAQIVEKLRKGGAMEYTTIVSAGASELAPVQYIAPY 243

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AE + S+G +VL++ D +++ A + R ++      P    YP  VF    RLLER
Sbjct: 244 AGSAMAEEWLSQGKDVLIVYDDLSKHAVAYRTVSLLLKRPPGREAYPGDVFYLHSRLLER 303

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +E   G+ITA+  +     + +  I  +V SI DG I L + L   G  P +D  
Sbjct: 304 ACRLNEENGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLQQDLFNAGFRPAIDTG 363

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++  SL   + +F E +       +   +D      +     + 
Sbjct: 364 LSVSRVGSSAQIKAMKQVSGSLKLELAQFAEMQ---AFAQFGSDLDAATKATLDHGEKVR 420

Query: 415 DFLKQSPSDLSSED 428
           + LKQ+     S +
Sbjct: 421 EVLKQAQYSPRSVE 434


>gi|57115587|gb|AAW33100.1| F1-ATPase alpha subunit [Plantago atrata]
          Length = 386

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 23/394 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V     ++   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGL-KEIQAGEMVEF---STGVKGMALNLENENVGIVVFGSDTAIQE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKTMLGRVVDGLGLPIDGKGALGAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIVNQKTLNSRATSESEKLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++    +N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSENNASEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +T+ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLTKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            K++  SL   + ++ E   +     +   +D  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 386


>gi|164685632|gb|ABY66762.1| atp1 [Polygala sanguinea]
          Length = 413

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|6561645|gb|AAF16989.1|AF197657_1 ATPase alpha subunit [Sabia sp. Qiu 91025]
          Length = 422

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 169/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDTLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 406


>gi|6561676|gb|AAF17020.1|AF197688_1 ATPase alpha subunit [Doryphora sassafras]
          Length = 421

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 409


>gi|20146616|gb|AAM12462.1| ATP synthase alpha subunit [Styrax officinalis]
          Length = 399

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G  V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGKMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT  +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATGSDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|186920113|ref|YP_001874767.1| ATP synthase F0 subunit 1 [Hemiselmis andersenii]
 gi|186461059|gb|ACC78221.1| ATP synthase F0 subunit 1 [Hemiselmis andersenii]
          Length = 490

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/416 (22%), Positives = 169/416 (40%), Gaps = 24/416 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G + +I         L   +  G+         D  G V+ +  D V I   G    I 
Sbjct: 4   TGIVLTIGDGIVRAYGLGD-IQAGEMCEFPAA--DIKGMVLNLETDNVGIVIFGNDRLIK 60

Query: 83  LGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            GD+V    R    P      GRV+++LG  IDG         +  +  K P  + R+ V
Sbjct: 61  EGDIVKRTRRIVEVPIGEALLGRVVDSLGVAIDGKP--INAKENRRVEVKAPGIIPRKSV 118

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------------ 189
            +  ++G++V+D   P+  GQR  +      GK+ +      +                 
Sbjct: 119 HEPMQSGLKVVDALVPIGRGQRELIIGDRQTGKTAVAIDTIINQQSIHARKDQAGVKPLY 178

Query: 190 VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            I   +G++   V +  +          ++++ AT+  S  L+ +AP T  T+ EYF   
Sbjct: 179 CIYVAIGQKRSTVAQVSKILQSAKALDYTIIIAATASNSAPLQFLAPYTGCTMGEYFRDN 238

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--N 306
           G + L+I D +++ A + R+++      P    +P  VF    RLLER     ++ G  +
Sbjct: 239 GMDALVIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMGEKAGLGS 298

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A  
Sbjct: 299 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPALNVGLSVSRVGSAAQI 358

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              K++  +L   + ++ E   +     +   +D      +++   + + LKQS  
Sbjct: 359 KAIKQVAGTLKLELAQYRE---VAAFAQFGSDLDAATQHLLNRGSKLTELLKQSQF 411


>gi|34539391|gb|AAQ74579.1| F1-ATPase alpha subunit [Orchidantha maxillarioides]
          Length = 416

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 168/410 (40%), Gaps = 21/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S++     V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVSDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 357 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 403


>gi|74101650|gb|AAZ99740.1| FliIL [Aeromonas hydrophila]
          Length = 443

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 158/421 (37%), Positives = 236/421 (56%), Gaps = 9/421 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGE 79
            + G +  +T +   V  +   + +G          +  L +V+  N DI Y+ P+    
Sbjct: 23  RRYGRLVRVTGLTLEV--VGCQLVMGQRCRVDTATGAPLLAEVVGFNRDISYLMPLQPMS 80

Query: 80  EISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V    G   I       GRV++ L +P+DG      G+  + + +  P  + R
Sbjct: 81  GLYAGARVLPIDGEETIQVGEHLLGRVVDGLLQPLDGRPLRDDGE-RVALFASPPNPLLR 139

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
             V +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R+     V++ L+GER
Sbjct: 140 TPVREPLDVGIRAINGLLTVGKGQRLGLFAGSGVGKSMLLGMMTRNTTAQIVVVGLIGER 199

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI      + L ++VVV A +D+SP++R  A      IAEYF  +G +VLL++D
Sbjct: 200 GREVREFIEHSLGPEGLARAVVVAAPADQSPLMRLRAAQLCHRIAEYFREQGRDVLLLMD 259

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REIA   GE P  RGYP SVFS L +L+ER G      G+++A  +VL +G
Sbjct: 260 SLTRYAQAQREIALAIGEPPATRGYPPSVFSMLTQLVERAGNGTHPDGSLSAFYTVLAEG 319

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+  DP+ D+ R+ILDGHIVL R LAEEG YP +D  ASVSR+  +   A+ + L  +L 
Sbjct: 320 DDQQDPVVDAARAILDGHIVLTRRLAEEGHYPAIDIGASVSRVMPQVVPAEWQTLAVTLR 379

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            L  R+++ R++  +GGY+PG D  +D+AV + P I  FL+Q   +   E  F ++   L
Sbjct: 380 QLWGRYQQVRELLPLGGYQPGADPQMDEAVQRYPAIAAFLQQGIHE---ETPFAQVMTGL 436

Query: 438 Q 438
           +
Sbjct: 437 K 437


>gi|28630328|gb|AAM93476.1| H+-transporting ATP synthase alpha subunit isoform 1 [Branchiostoma
           lanceolatum]
          Length = 394

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 167/376 (44%), Gaps = 18/376 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V I   G  + I  GD+V   G    +       GRV++ALG+PIDG   
Sbjct: 21  GMALNLEPDNVGIVVFGNDKLIKEGDIVKRTGAIVDVPVGEDILGRVVDALGEPIDGKGP 80

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           L   +    +  K P  + R  V++   TGI+ +D   P+  GQR  +      GK    
Sbjct: 81  LVSKE-RRRVGLKAPGIIPRISVKEPMLTGIKAVDSLVPIGRGQRELLIGDRQTGKTALA 139

Query: 175 -STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
             T+++    +D  D       I   +G++   V + ++     D ++ ++VV AT+ ++
Sbjct: 140 IDTIINQKGFNDAQDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMRYTIVVSATASDA 199

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +  ++ E+F   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 200 APLQYLAPYSGCSMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 259

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER          G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 260 YLHSRLLERAAKMNDSYGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 319

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A +   K++  S+   + ++ E   +     +   +D     
Sbjct: 320 GIRPAINVGLSVSRVGSAAQTKAMKQVSGSMKLELAQYRE---VAAFAQFGSDLDASTQA 376

Query: 406 AVHQVPIIYDFLKQSP 421
            + +   + + LKQ  
Sbjct: 377 LLSRGVRLTELLKQGQ 392


>gi|300693367|ref|YP_003749340.1| flii: flagellar biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum PSI07]
 gi|299075404|emb|CBJ34699.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum PSI07]
          Length = 481

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 154/431 (35%), Positives = 226/431 (52%), Gaps = 23/431 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV  G ++ +  +      L   V     V         L +V+    +  ++ P     
Sbjct: 41  VVTCGKLTRVAGLVMEAVGLKLPVGSACRVELP-YGRHVLAEVVGFAEERAFLMPQTDLV 99

Query: 80  EISLGDLVFHWGRFRIS---------------PSACWCGRVINALGKPIDGDDSLGKGD- 123
            +  G  VF      +                      GRV++A G+P+DG   LG  + 
Sbjct: 100 GVVPGARVFPLEPQHLPLNTADPTIAHSKFLPVGPRLLGRVVDANGEPLDGKGPLGTHEE 159

Query: 124 LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           L+   ++  P   + R+ +E     G+R I+    +  GQR+G+FAGSG+GKS LL M A
Sbjct: 160 LAWGSLAPAPLNPLKRKSIEHVLDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMA 219

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D SP++R      A TI
Sbjct: 220 RYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADNSPLMRLQGAAYAHTI 279

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS- 300
           AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G   
Sbjct: 280 AEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAGNGM 339

Query: 301 ---EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAE+G YP +D   S+
Sbjct: 340 VDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSI 399

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+       ++         L  R++  RD+  +G Y  G D + D+A+ + P +  FL
Sbjct: 400 SRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGAYARGSDPMTDQAIARYPNMEGFL 459

Query: 418 KQSPSDLSSED 428
           +Q   +  S +
Sbjct: 460 QQGMFENESRE 470


>gi|164685626|gb|ABY66759.1| atp1 [Oxalis stricta]
          Length = 413

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYRVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SLKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|119947325|ref|YP_945005.1| ATP synthase F1, alpha subunit [Psychromonas ingrahamii 37]
 gi|190358221|sp|A1T0Z1|ATPA2_PSYIN RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|119865929|gb|ABM05406.1| ATP synthase F1, alpha subunit [Psychromonas ingrahamii 37]
          Length = 513

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +               G I S++     +  L++    G+ +      
Sbjct: 1   MQLNSTEISDLIKQRIGKFEAVSEARNEGTIVSVSDGIVRINGLAE-CMQGEMIELPNGG 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG PID
Sbjct: 60  ---FAMALNLERDSVGAVVMGPFRDLREGQKVKSTGRILEVPVGKGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  ++R+ V++  +TG + ID   P+  GQR  +     +GK
Sbjct: 117 GKGPI-ENDGYSPIEVIAPGVIDRKSVDQPVQTGWKSIDSMVPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAIAIDAIINQKHTGLFSIYVAIGQKASTIANVVNKLEEHGALENTIVVVASASETAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSAAYVEAFTKGAVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A     KKL   +   + ++ E   +     +   
Sbjct: 356 TTELFNSGIRPAVDPGISVSRVGGSAQCKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDETTRKQLDHGKKVTELMKQKQ 435


>gi|27461563|gb|AAM95198.1| ATPase F1 alpha subunit [Puya berteroniana]
          Length = 415

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 22/407 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVGE 197
           G++ +D   P+  GQR  +      GK+ +      +                +   +G+
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANAFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|6561661|gb|AAF17005.1|AF197673_1 ATPase alpha subunit [Drimys winteri]
          Length = 424

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 170/416 (40%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 179 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 239 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 299 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 359 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 411


>gi|145632748|ref|ZP_01788482.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 3655]
 gi|145634521|ref|ZP_01790230.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittAA]
 gi|144986943|gb|EDJ93495.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 3655]
 gi|145268066|gb|EDK08061.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae PittAA]
          Length = 513

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/448 (22%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLSPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLSHGEKVTELLKQKQFAPLS 440


>gi|34539421|gb|AAQ74594.1| F1-ATPase alpha subunit [Ravenala madagascariensis]
          Length = 415

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 167/410 (40%), Gaps = 21/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 402


>gi|187731460|ref|YP_001882429.1| F0F1 ATP synthase subunit alpha [Shigella boydii CDC 3083-94]
 gi|301020862|ref|ZP_07184923.1| ATP synthase F1, alpha subunit [Escherichia coli MS 69-1]
 gi|226739941|sp|B2TUP1|ATPA_SHIB3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|187428452|gb|ACD07726.1| ATP synthase F1, alpha subunit [Shigella boydii CDC 3083-94]
 gi|300398432|gb|EFJ81970.1| ATP synthase F1, alpha subunit [Escherichia coli MS 69-1]
          Length = 513

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKNGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|225010371|ref|ZP_03700843.1| ATP synthase F1, alpha subunit [Flavobacteria bacterium MS024-3C]
 gi|225005850|gb|EEG43800.1| ATP synthase F1, alpha subunit [Flavobacteria bacterium MS024-3C]
          Length = 524

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 110/449 (24%), Positives = 175/449 (38%), Gaps = 37/449 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   ++  + + G +  +      V  LS  V  G+ V   G      G V+ +  D 
Sbjct: 16  QLAGFNAQASLNEVGTVLQVGDGIARVYGLS-NVQYGELVEFDGG---VQGIVLNLEEDH 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +    +I  G  V    R   I+      GRV++ LGKPIDG   +      M +
Sbjct: 72  VGVVLLSPSRDIREGTTVKRTERIASINVGEGIVGRVVDTLGKPIDGKGPIEGTVYEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF- 187
             K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +    
Sbjct: 132 ERKAPGVIFRQPVTEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKTTVCIDTILNQKEF 191

Query: 188 ------DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
                    I   +G++   V    +       L  + +V A + +   ++  AP     
Sbjct: 192 YDAGEPVYCIYVAIGQKASTVAAIAQTLEDKGALAYTTIVAANASDPAPMQVYAPFAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFFLHSRLLERAAKV 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L +
Sbjct: 312 IADDAIAKDMNDLPDSLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLEQ 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A     KK+  +L     +F E         +   +D
Sbjct: 372 DLFNQGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSED 428
                 + +     + LKQ+ +D  + ED
Sbjct: 429 AATLNVIEKGRRNVEILKQAQNDPFTVED 457


>gi|85711039|ref|ZP_01042099.1| flagellum-specific ATP synthase [Idiomarina baltica OS145]
 gi|85694952|gb|EAQ32890.1| flagellum-specific ATP synthase [Idiomarina baltica OS145]
          Length = 445

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 158/433 (36%), Positives = 237/433 (54%), Gaps = 8/433 (1%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
            A L +      V+  GY++ +  + +    +     +G     +  + D   +V+    
Sbjct: 9   FASLKKRVKPAPVLVSGYLTRVVGLMFEAVGV--RAPIGATCAVESAHGDIEAEVVGFEG 66

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              Y+ P+     +  G  V    R  ++       GRVI+A G P+D    +   + + 
Sbjct: 67  QTSYLMPMDDAHGVVPGAKVKPLTRTEQLPLGLELLGRVIDARGHPLDAKGPILTDNQNA 126

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
              S     +NR+ V+     G+  I+    +  GQR+G+FAGSG+GKS LL M  +   
Sbjct: 127 -YRSLPINPLNRRPVKVPLDVGVNAINACITVGQGQRMGLFAGSGVGKSVLLGMMTKGTN 185

Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFI++ LG+  L+K+VVV A +D+SP+LR     TA  +AEYF
Sbjct: 186 ADVIVVGLIGERGREVKEFIDEILGEEGLEKAVVVAAPADQSPLLRLRGCETASKVAEYF 245

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G NVLL++DS+TR+A + REIA   GE P  +GYP SVF+ LP L+ER G     +G
Sbjct: 246 RDQGMNVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGGGAQG 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVLNR LA+ G YP +D  AS+SR+  +  
Sbjct: 306 SITAFYTVLTEGDDLQDPIADSARAILDGHIVLNRELADSGHYPAIDIEASISRVMPQVV 365

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           S +  +  + +      F   RD+  IG Y  G D  +D+A+   P +  FL Q  +++ 
Sbjct: 366 SDEHLQRATKVRQWYSSFRRNRDLISIGAYSKGSDAKIDEAIAMQPQVEGFLTQRMNEVI 425

Query: 426 SEDVFQEITKKLQ 438
           S D   E   KLQ
Sbjct: 426 SYD---ESLMKLQ 435


>gi|20146620|gb|AAM12464.1| ATP synthase alpha subunit [Camellia sinensis]
          Length = 399

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|118581829|ref|YP_903079.1| flagellar protein export ATPase FliI [Pelobacter propionicus DSM
           2379]
 gi|118504539|gb|ABL01022.1| type III secretion system ATPase, FliI/YscN [Pelobacter propionicus
           DSM 2379]
          Length = 439

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 232/421 (55%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           +   G ++ +  +   +        +G     + +  + +  +V+    +   + P+G  
Sbjct: 21  IRLNGKVTQVVGLV--IEGYCPDTSVGAICEIRPQVGEPIPAEVVGFRNNKTLLMPLGEL 78

Query: 79  EEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             + L  L+     +  +       GRVI+ LG PID    L   +    I +     M 
Sbjct: 79  RGVGLDSLISIRREQASMGVGPLMLGRVIDGLGNPIDDRGPL-HVEEEYPIYATPVNPMT 137

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + K    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+GE
Sbjct: 138 RPPIRKPLDLGIRSINGLLTCGQGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGE 197

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE+REFI +D     LKKSVVVVATSD+ P++R      A TIAEYF  +G  VLL++
Sbjct: 198 RGRELREFIEKDLQEIGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQKQGKKVLLMM 257

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G      G+IT + +VLV+
Sbjct: 258 DSVTRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERAGNFTD--GSITGLYTVLVE 315

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ N+PI+D+VRSILDGHIVL R+LA    YPP+D LAS SR+ +     D ++LV   
Sbjct: 316 GDDFNEPISDAVRSILDGHIVLTRNLASRNIYPPIDILASASRVMNDVTVTDHQELVGKF 375

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
              +  + ++ D+  IG Y+ G +  +D A+ ++  +  +LKQ+  D ++     E  K 
Sbjct: 376 KEAMATYRQSEDLINIGAYKSGSNPGIDYAISKMDGMTAYLKQAVRDPANLQESVESLKA 435

Query: 437 L 437
           L
Sbjct: 436 L 436


>gi|298207198|ref|YP_003715377.1| ATP synthase subunit A [Croceibacter atlanticus HTCC2559]
 gi|83849833|gb|EAP87701.1| ATP synthase subunit A [Croceibacter atlanticus HTCC2559]
          Length = 524

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 103/448 (22%), Positives = 168/448 (37%), Gaps = 36/448 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL+   +K  + + G + ++      V  LS     G+ V  +         V+ +  D 
Sbjct: 16  QLSGFENKASLDEVGTVLTVGDGIARVYGLS-NAQYGELVEFETG---LEAIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G    IS G  V    R   I       GRV++ LG PIDG   +      M +
Sbjct: 72  VGVVLLGPSVGISEGSTVKRTQRIASIKVGEGIVGRVVDTLGNPIDGKGPIEGETFEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF- 187
             K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK+T+      +    
Sbjct: 132 ERKAPGVIYREPVTEPLQTGIKSIDAMVPIGRGQRELVIGDRQTGKTTVCIDTILNQKEF 191

Query: 188 ------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I   +G++   V    +          + +V A + +   ++  AP     
Sbjct: 192 YDAGEPVYCIYVAIGQKASTVAGIAKTLEDKGAMAYTTIVAANASDPAPMQVYAPFAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEYFRDTGRPGLIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFFLHSRLLERAAKV 311

Query: 301 EKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
             +                     G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 INDDGIARDMNDLPDSLKDKVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLTS 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +D
Sbjct: 372 DLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +     + LKQ  +D  + +
Sbjct: 429 AATLNVIEKGKRNVEILKQGQNDPYTVE 456


>gi|292490162|ref|YP_003533057.1| ATP synthase F1 subunit alpha [Erwinia amylovora CFBP1430]
 gi|292901164|ref|YP_003540533.1| ATP synthase subunit alpha [Erwinia amylovora ATCC 49946]
 gi|291201012|emb|CBJ48151.1| ATP synthase alpha subunit [Erwinia amylovora ATCC 49946]
 gi|291555604|emb|CBA24224.1| ATP synthase F1, alpha subunit [Erwinia amylovora CFBP1430]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 59  --RYAIALNLERDSVGAVVMGPYADLAEGMTVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +      N    ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|94317184|gb|ABF14770.1| ATP1 [Pelargonium x hortorum]
          Length = 394

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/391 (24%), Positives = 163/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G   EI  GDLV   G     P      GR
Sbjct: 6   GEMVEFA---SGVKGIALNLENENVGIVAFGSDTEIKEGDLVKRTGSIVDVPAGKALLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 63  VVDGLGLPIDGLGSLCDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 121

Query: 165 GVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++      
Sbjct: 122 LIIGDRQTGKTAIAIDTILNQKDLNSRATSDKDILYCVYVAVGQKRSTVAQLVQILSEGG 181

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 182 ALSYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 242 LRRPPGREAFPGDVFYLHSRLLERAAKRSDDTGAGSLTALPVIETQAGDVSAYIPTNVIS 301

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 302 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VA 358

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + + LKQ+ 
Sbjct: 359 AFAQFGSDLDAATQALLNRGARLTEVLKQAQ 389


>gi|34539173|gb|AAQ74470.1| F1-ATPase alpha subunit [Aletris farinosa]
          Length = 412

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIXRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDTLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|27461565|gb|AAM95199.1| ATPase F1 alpha subunit [Sparganium eurycarpum]
          Length = 416

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 166/408 (40%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V          G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IXAGEMVEFACG---VKGXXLNLENEXVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGTESETLYCVYVAIG 176

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 177 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|299068780|emb|CBJ40020.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Ralstonia solanacearum CMR15]
          Length = 481

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 154/431 (35%), Positives = 226/431 (52%), Gaps = 23/431 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV  G ++ +  +      L   V     V         L +V+    +  ++ P     
Sbjct: 41  VVTCGKLTRVAGLVMEAVGLKLPVGSACRVELP-YGRHVLAEVVGFAEERAFLMPQTDLV 99

Query: 80  EISLGDLVFHWGRFRIS---------------PSACWCGRVINALGKPIDGDDSLGK-GD 123
            +  G  VF      +                      GRV++A G+P+DG   LG   +
Sbjct: 100 GVVPGARVFPLEPQHLPLDTADPTIAHSKFLPVGPRLLGRVVDANGEPLDGKGPLGASEE 159

Query: 124 LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           L+   ++  P   + R+ +E     G+R I+    +  GQR+G+FAGSG+GKS LL M A
Sbjct: 160 LAWGTLAPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMA 219

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D SP++R      A TI
Sbjct: 220 RYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADNSPLMRLQGAAYAHTI 279

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G   
Sbjct: 280 AEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAGNGM 339

Query: 302 ----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAE+G YP +D   S+
Sbjct: 340 VDAAGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSI 399

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+       ++         L  R++  RD+  +G Y  G D + D+A+ + P +  FL
Sbjct: 400 SRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGAYARGSDPVTDQAIARYPSMEGFL 459

Query: 418 KQSPSDLSSED 428
           +Q   +  S +
Sbjct: 460 QQGMFENESRE 470


>gi|114777381|ref|ZP_01452378.1| F0F1 ATP synthase subunit alpha [Mariprofundus ferrooxydans PV-1]
 gi|114552163|gb|EAU54665.1| F0F1 ATP synthase subunit alpha [Mariprofundus ferrooxydans PV-1]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 109/460 (23%), Positives = 190/460 (41%), Gaps = 30/460 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +   ++ + ++  K           G I S+      +  LS     G+ +   G  
Sbjct: 1   MKLDTTEISSIIKEQIKGFESAAADANVGTIVSVGDGVALIHGLS-GAMAGELLDFPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D  G V+ +  D V     G    +S GD V   GR   +       GRV+NALG+PID
Sbjct: 58  -DTRGIVLNLEEDSVGAVIFGEYTHLSEGDQVKCTGRIFEVPVGPELKGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      M +    P  + R+ V++   TGI+ +D   P+  GQR  +      GK
Sbjct: 117 GKGPVNATATDM-VEKVAPGVIWRKSVDQPMATGIKAVDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   V   +           +++V A++ ES  L+
Sbjct: 176 TAIALDTIINQKDTGVTCIYVAIGQKASSVATVVRTLKEHGALDHTIIVSASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLILRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  E + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEFVKEFTKGEVEGKTGSLTALPIIETQEGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G+ P V+   SVSR+   A +   KK+   L   + ++ E   +     +   
Sbjct: 356 ETGLFNSGQRPAVNVGLSVSRVGGAAQTKAVKKVGGGLRLDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +D      + +     + LKQS ++  S      +   L 
Sbjct: 413 LDAATRGQIERGKRGMEALKQSENNPMSVAEITAVLHALN 452


>gi|315127316|ref|YP_004069319.1| flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913]
 gi|315015830|gb|ADT69168.1| flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913]
          Length = 444

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 157/438 (35%), Positives = 242/438 (55%), Gaps = 12/438 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L+Q             G ++ +  +      L     +G     +  N     +++  
Sbjct: 10  ERLSQYQRHIKIPAPAVAGVLTRVVGLTLEAKGL--RAPVGSQCKIETMNGFVDAEIVGF 67

Query: 66  NLDIVYICPVGIGEEISLGDLVFH----WGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           N   +Y+ P      +  G  V       G   +       GRV++ LG+P+DG   +  
Sbjct: 68  NDQTLYLMPNDHISGVLPGARVIPQVNDTG---LPVGMSLLGRVVDGLGRPLDGLGKIN- 123

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            + +++        + R+ + K    G+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 124 AEHTLKFAQNAINPLARRPISKPMDVGVRAINSVITVGQGQRMGLFAGSGVGKSVLLGMM 183

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            R    D +++ LVGERGREV+EFIE+ LG +  K+SVVV A +D SP++R     +AVT
Sbjct: 184 TRGSEADVIVVGLVGERGREVKEFIEEILGVEGRKRSVVVAAPADASPLMRLKGCESAVT 243

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G NVLL+LDS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G  
Sbjct: 244 IAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNG 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D   S+SR+
Sbjct: 304 GEGQGSITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRDLADSGHYPAIDIEKSISRV 363

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S    +    L  +   +++ +D+  +G Y+ G D +LD+A++ +P +  FL+Q 
Sbjct: 364 MPQVVSESHMQQARVLKQVYSMYQQNKDMITLGAYQKGSDQMLDQAINMMPRVNAFLQQG 423

Query: 421 PSDLSSEDV-FQEITKKL 437
             D+ S D   Q + + L
Sbjct: 424 MRDVISYDDGLQGLAQLL 441


>gi|6561663|gb|AAF17007.1|AF197675_1 ATPase alpha subunit [Zygogynum pauciflorum]
          Length = 422

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 170/416 (40%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 409


>gi|260595800|ref|YP_003208371.1| F0F1 ATP synthase subunit alpha [Cronobacter turicensis z3032]
 gi|260214977|emb|CBA26610.1| ATP synthase subunit alpha [Cronobacter turicensis z3032]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSPIEVIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|6561654|gb|AAF16998.1|AF197666_1 ATPase alpha subunit [Sarcandra chloranthoides]
          Length = 423

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 170/413 (41%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 176

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 177 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 236

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 237 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 297 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 356

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 357 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 406


>gi|307731345|ref|YP_003908569.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1003]
 gi|307585880|gb|ADN59278.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1003]
          Length = 576

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 155/444 (34%), Positives = 238/444 (53%), Gaps = 18/444 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIR 64
           A  A +     +   G ++    +      L   + +G  V+ +     +L     +V+ 
Sbjct: 131 ALRARNAIAKPMRACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPPGSSLPMAEAEVVG 188

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPID 114
            + D +++ P      +  G  VF            G  R+       GRV++A G+P+D
Sbjct: 189 FSGDRLFLMPTTEVIGLLPGARVFPLESAPIADPMAGAKRLPVGWELLGRVLDASGRPLD 248

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   LG       + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 249 GLGPLGAH-ADAPLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGK 307

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           S LL   AR    + ++I L+GERGREV+EFI +    + L +SVV+ A +D SP+LR  
Sbjct: 308 SVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQ 367

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L
Sbjct: 368 AAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPAL 427

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D 
Sbjct: 428 VERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDI 487

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR        +          ++ R++  RD+  +G Y  G D +LD+A+   P +
Sbjct: 488 EASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRM 547

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL+Q   + ++ +   E+   L
Sbjct: 548 EAFLQQGFRECANFEPSIEMLDAL 571


>gi|228473782|ref|ZP_04058527.1| ATP synthase F1, alpha subunit [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274803|gb|EEK13626.1| ATP synthase F1, alpha subunit [Capnocytophaga gingivalis ATCC
           33624]
          Length = 526

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 170/443 (38%), Gaps = 36/443 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   +   + + G +  +      +  LS+ V  G+ V  +       G V+ +  D
Sbjct: 15  KQLANFDASVSLEEVGTVLEVGDGIARIFGLSK-VENGELVHFESGQE---GMVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G   +I  GD V        I       GRVIN LG+PIDG   +      M 
Sbjct: 71  HVGVVLLGSSTQIKEGDTVKRTKTIASIKVGEGIVGRVINTLGEPIDGKGPILGELYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
              K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 FERKAPGVIYRQPVNEPLQTGIKAIDAMIPIGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          + +V A + +   ++  AP   V
Sbjct: 191 FYDAGNPVYCIYVAIGQKASTVAGIAKTLEDAGALAYTTIVAANASDPAPMQVYAPFAGV 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAMAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             K+                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VIKDDNVARNMNDLPDSIKHLVKGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     +F E   +     +   +
Sbjct: 371 SDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQFRE---LAAFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D      + +     + LKQS +
Sbjct: 428 DAATSNVIEKGKRNVEILKQSSN 450


>gi|57115589|gb|AAW33101.1| F1-ATPase alpha subunit [Plantago lanceolata]
          Length = 386

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/394 (24%), Positives = 165/394 (41%), Gaps = 23/394 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKGMALNLENENVGIVVFGSDTAIQE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKTMLGRVVDGLGLPIDGKGALGAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIVNQKTLNSRATSESEKLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++    +N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSENNASEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +T+ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLTKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            K++  SL   + ++ E   +     +   +D  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 386


>gi|126176549|ref|YP_001052698.1| F0F1 ATP synthase subunit alpha [Shewanella baltica OS155]
 gi|153002863|ref|YP_001368544.1| F0F1 ATP synthase subunit alpha [Shewanella baltica OS185]
 gi|160877610|ref|YP_001556926.1| F0F1 ATP synthase subunit alpha [Shewanella baltica OS195]
 gi|217975450|ref|YP_002360201.1| F0F1 ATP synthase subunit alpha [Shewanella baltica OS223]
 gi|304412689|ref|ZP_07394292.1| ATP synthase F1, alpha subunit [Shewanella baltica OS183]
 gi|307305846|ref|ZP_07585592.1| ATP synthase F1, alpha subunit [Shewanella baltica BA175]
 gi|166201677|sp|A3DAR6|ATPA_SHEB5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201678|sp|A6WUJ2|ATPA_SHEB8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081316|sp|A9KX08|ATPA_SHEB9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808113|sp|B8EDV2|ATPA_SHEB2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|125999754|gb|ABN63829.1| ATP synthase F1, alpha subunit [Shewanella baltica OS155]
 gi|151367481|gb|ABS10481.1| ATP synthase F1, alpha subunit [Shewanella baltica OS185]
 gi|160863132|gb|ABX51666.1| ATP synthase F1, alpha subunit [Shewanella baltica OS195]
 gi|217500585|gb|ACK48778.1| ATP synthase F1, alpha subunit [Shewanella baltica OS223]
 gi|304348899|gb|EFM13314.1| ATP synthase F1, alpha subunit [Shewanella baltica OS183]
 gi|306911339|gb|EFN41765.1| ATP synthase F1, alpha subunit [Shewanella baltica BA175]
 gi|315269808|gb|ADT96661.1| ATP synthase F1, alpha subunit [Shewanella baltica OS678]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-NDGYSPIEVIAPGVIERQSVDQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +   K +   +G++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TAMAIDAIINQKNSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAIYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGVRVTELMKQKQ 435


>gi|269967823|ref|ZP_06181867.1| type III secretion system ATPase [Vibrio alginolyticus 40B]
 gi|269827528|gb|EEZ81818.1| type III secretion system ATPase [Vibrio alginolyticus 40B]
          Length = 458

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 155/423 (36%), Positives = 227/423 (53%), Gaps = 9/423 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINL 67
           Q +      L+   G ++ +T     +  +   V +G+    +  +     L +V+    
Sbjct: 29  QQSAIKHTRLIQIRGRVTQVTGTI--IKAVVPGVRVGELCELRNPDQTLSLLAEVVGFQQ 86

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               + P+G    IS    V   G+   +       G  ++ LG+P DG  S        
Sbjct: 87  HHALLTPLGNMFGISSNTEVSPMGKMHEVGVGDHLLGTTLDGLGRPFDGTQSQEPS-AWY 145

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    PP M R+ +EK    G+R ID       GQR+G+FA +G GKSTLL+   RS  
Sbjct: 146 PVYRDAPPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAE 205

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D  +++L+GERGREVREFI  D   + + KSV+VVATSD   + R  A   A +IAEYF
Sbjct: 206 VDVTVLALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYF 265

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G  VLL++DS+TRFA + REI   +GE P  RGYP SVF+ LP+L+ER G S+K  G
Sbjct: 266 RDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--G 323

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA+ +VLV+GD+  +P+AD  RSILDGHI+L+R LA    YP +D L S SR+ ++  
Sbjct: 324 SITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIV 383

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             D +   + +  ++ ++EE   +  IG Y+ G D   D A+ Q   I  FL+Q    + 
Sbjct: 384 EPDHQASAAHIREMLAKYEEVELLIKIGEYQHGADSRADMAIAQSDDICAFLRQGTQGIG 443

Query: 426 SED 428
             D
Sbjct: 444 DLD 446


>gi|15804334|ref|NP_290373.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 EDL933]
 gi|15833930|ref|NP_312703.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           Sakai]
 gi|16131602|ref|NP_418190.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24115037|ref|NP_709547.1| F0F1 ATP synthase subunit alpha [Shigella flexneri 2a str. 301]
 gi|26250478|ref|NP_756518.1| F0F1 ATP synthase subunit alpha [Escherichia coli CFT073]
 gi|30064961|ref|NP_839132.1| F0F1 ATP synthase subunit alpha [Shigella flexneri 2a str. 2457T]
 gi|74314240|ref|YP_312659.1| F0F1 ATP synthase subunit alpha [Shigella sonnei Ss046]
 gi|82546105|ref|YP_410052.1| F0F1 ATP synthase subunit alpha [Shigella boydii Sb227]
 gi|82779074|ref|YP_405423.1| F0F1 ATP synthase subunit alpha [Shigella dysenteriae Sd197]
 gi|89110273|ref|AP_004053.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. W3110]
 gi|91213259|ref|YP_543245.1| F0F1 ATP synthase subunit alpha [Escherichia coli UTI89]
 gi|110644075|ref|YP_671805.1| F0F1 ATP synthase subunit alpha [Escherichia coli 536]
 gi|110807558|ref|YP_691078.1| F0F1 ATP synthase subunit alpha [Shigella flexneri 5 str. 8401]
 gi|157155061|ref|YP_001465225.1| F0F1 ATP synthase subunit alpha [Escherichia coli E24377A]
 gi|157163216|ref|YP_001460534.1| F0F1 ATP synthase subunit alpha [Escherichia coli HS]
 gi|168748536|ref|ZP_02773558.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753636|ref|ZP_02778643.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759934|ref|ZP_02784941.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766234|ref|ZP_02791241.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772217|ref|ZP_02797224.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|168786577|ref|ZP_02811584.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|168798782|ref|ZP_02823789.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|170022229|ref|YP_001727183.1| F0F1 ATP synthase subunit alpha [Escherichia coli ATCC 8739]
 gi|170083235|ref|YP_001732555.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170682498|ref|YP_001746064.1| F0F1 ATP synthase subunit alpha [Escherichia coli SMS-3-5]
 gi|170766991|ref|ZP_02901444.1| ATP synthase F1, alpha subunit [Escherichia albertii TW07627]
 gi|188492290|ref|ZP_02999560.1| ATP synthase F1, alpha subunit [Escherichia coli 53638]
 gi|191165785|ref|ZP_03027623.1| ATP synthase F1, alpha subunit [Escherichia coli B7A]
 gi|191170554|ref|ZP_03032107.1| ATP synthase F1, alpha subunit [Escherichia coli F11]
 gi|193063860|ref|ZP_03044947.1| ATP synthase F1, alpha subunit [Escherichia coli E22]
 gi|193069205|ref|ZP_03050162.1| ATP synthase F1, alpha subunit [Escherichia coli E110019]
 gi|194428137|ref|ZP_03060681.1| ATP synthase F1, alpha subunit [Escherichia coli B171]
 gi|194431102|ref|ZP_03063395.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1012]
 gi|194435744|ref|ZP_03067847.1| ATP synthase F1, alpha subunit [Escherichia coli 101-1]
 gi|195936361|ref|ZP_03081743.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           EC4024]
 gi|208806672|ref|ZP_03249009.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208813286|ref|ZP_03254615.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818307|ref|ZP_03258627.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400618|ref|YP_002273262.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921215|ref|YP_002295299.1| F0F1 ATP synthase subunit alpha [Escherichia coli SE11]
 gi|215489072|ref|YP_002331503.1| F0F1 ATP synthase subunit alpha [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217326617|ref|ZP_03442701.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218551268|ref|YP_002385060.1| F0F1 ATP synthase subunit alpha [Escherichia fergusonii ATCC 35469]
 gi|218556305|ref|YP_002389219.1| F0F1 ATP synthase subunit alpha [Escherichia coli IAI1]
 gi|218560809|ref|YP_002393722.1| F0F1 ATP synthase subunit alpha [Escherichia coli S88]
 gi|218692022|ref|YP_002400234.1| F0F1 ATP synthase subunit alpha [Escherichia coli ED1a]
 gi|218697460|ref|YP_002405127.1| F0F1 ATP synthase subunit alpha [Escherichia coli 55989]
 gi|218702584|ref|YP_002410213.1| F0F1 ATP synthase subunit alpha [Escherichia coli IAI39]
 gi|218707380|ref|YP_002414899.1| F0F1 ATP synthase subunit alpha [Escherichia coli UMN026]
 gi|227883956|ref|ZP_04001761.1| F0F1 ATP synthase subunit alpha [Escherichia coli 83972]
 gi|237703535|ref|ZP_04534016.1| ATP synthase subunit alpha [Escherichia sp. 3_2_53FAA]
 gi|238902825|ref|YP_002928621.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli BW2952]
 gi|253775631|ref|YP_003038462.1| F0F1 ATP synthase subunit alpha [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038953|ref|ZP_04873005.1| ATP synthase F1, alpha subunit [Escherichia sp. 1_1_43]
 gi|254163686|ref|YP_003046794.1| F0F1 ATP synthase subunit alpha [Escherichia coli B str. REL606]
 gi|254795740|ref|YP_003080577.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021244|ref|ZP_05435109.1| F0F1 ATP synthase subunit alpha [Shigella sp. D9]
 gi|256025535|ref|ZP_05439400.1| F0F1 ATP synthase subunit alpha [Escherichia sp. 4_1_40B]
 gi|260846481|ref|YP_003224259.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O103:H2 str. 12009]
 gi|260857851|ref|YP_003231742.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O26:H11 str. 11368]
 gi|260870468|ref|YP_003236870.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O111:H- str. 11128]
 gi|261225891|ref|ZP_05940172.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258936|ref|ZP_05951469.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291285158|ref|YP_003501976.1| ATP synthase subunit alpha [Escherichia coli O55:H7 str. CB9615]
 gi|293407371|ref|ZP_06651293.1| atpA [Escherichia coli FVEC1412]
 gi|293413184|ref|ZP_06655850.1| ATP synthase F1 [Escherichia coli B354]
 gi|293417207|ref|ZP_06659834.1| ATP synthase F1 [Escherichia coli B185]
 gi|293464060|ref|ZP_06664474.1| ATP synthase F1 [Escherichia coli B088]
 gi|297518742|ref|ZP_06937128.1| F0F1 ATP synthase subunit alpha [Escherichia coli OP50]
 gi|298383113|ref|ZP_06992708.1| ATP synthase subunit alpha [Escherichia coli FVEC1302]
 gi|300815011|ref|ZP_07095236.1| ATP synthase F1, alpha subunit [Escherichia coli MS 107-1]
 gi|300824556|ref|ZP_07104666.1| ATP synthase F1, alpha subunit [Escherichia coli MS 119-7]
 gi|300896063|ref|ZP_07114622.1| ATP synthase F1, alpha subunit [Escherichia coli MS 198-1]
 gi|300902984|ref|ZP_07120927.1| ATP synthase F1, alpha subunit [Escherichia coli MS 84-1]
 gi|300916397|ref|ZP_07133137.1| ATP synthase F1, alpha subunit [Escherichia coli MS 115-1]
 gi|300925564|ref|ZP_07141437.1| ATP synthase F1, alpha subunit [Escherichia coli MS 182-1]
 gi|300932369|ref|ZP_07147634.1| ATP synthase F1, alpha subunit [Escherichia coli MS 187-1]
 gi|300940920|ref|ZP_07155446.1| ATP synthase F1, alpha subunit [Escherichia coli MS 21-1]
 gi|300950651|ref|ZP_07164545.1| ATP synthase F1, alpha subunit [Escherichia coli MS 116-1]
 gi|300958742|ref|ZP_07170859.1| ATP synthase F1, alpha subunit [Escherichia coli MS 175-1]
 gi|300983830|ref|ZP_07176772.1| ATP synthase F1, alpha subunit [Escherichia coli MS 200-1]
 gi|300984352|ref|ZP_07176958.1| ATP synthase F1, alpha subunit [Escherichia coli MS 45-1]
 gi|301019830|ref|ZP_07183971.1| ATP synthase F1, alpha subunit [Escherichia coli MS 196-1]
 gi|301047557|ref|ZP_07194629.1| ATP synthase F1, alpha subunit [Escherichia coli MS 185-1]
 gi|301305617|ref|ZP_07211707.1| ATP synthase F1, alpha subunit [Escherichia coli MS 124-1]
 gi|301324965|ref|ZP_07218520.1| ATP synthase F1, alpha subunit [Escherichia coli MS 78-1]
 gi|301644410|ref|ZP_07244409.1| ATP synthase F1, alpha subunit [Escherichia coli MS 146-1]
 gi|306815914|ref|ZP_07450052.1| F0F1 ATP synthase subunit alpha [Escherichia coli NC101]
 gi|307140434|ref|ZP_07499790.1| F0F1 ATP synthase subunit alpha [Escherichia coli H736]
 gi|307313194|ref|ZP_07592819.1| ATP synthase F1, alpha subunit [Escherichia coli W]
 gi|309784445|ref|ZP_07679084.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1617]
 gi|309795709|ref|ZP_07690124.1| ATP synthase F1, alpha subunit [Escherichia coli MS 145-7]
 gi|312967856|ref|ZP_07782068.1| ATP synthase F1, alpha subunit [Escherichia coli 2362-75]
 gi|312971974|ref|ZP_07786148.1| ATP synthase F1, alpha subunit [Escherichia coli 1827-70]
 gi|331644461|ref|ZP_08345590.1| ATP synthase F1, alpha subunit [Escherichia coli H736]
 gi|331649560|ref|ZP_08350646.1| ATP synthase F1, alpha subunit [Escherichia coli M605]
 gi|331655396|ref|ZP_08356395.1| ATP synthase F1, alpha subunit [Escherichia coli M718]
 gi|331660078|ref|ZP_08361016.1| ATP synthase F1, alpha subunit [Escherichia coli TA206]
 gi|331665388|ref|ZP_08366289.1| ATP synthase F1, alpha subunit [Escherichia coli TA143]
 gi|331670584|ref|ZP_08371423.1| ATP synthase F1, alpha subunit [Escherichia coli TA271]
 gi|331675220|ref|ZP_08375973.1| ATP synthase F1, alpha subunit [Escherichia coli TA280]
 gi|331679838|ref|ZP_08380508.1| ATP synthase F1, alpha subunit [Escherichia coli H591]
 gi|331685461|ref|ZP_08386047.1| ATP synthase F1, alpha subunit [Escherichia coli H299]
 gi|332282471|ref|ZP_08394884.1| F1 sector of membrane-bound ATP synthase alpha subunit [Shigella
           sp. D9]
 gi|81175141|sp|P0ABB2|ATPA_ECO57 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81175142|sp|P0ABB1|ATPA_ECOL6 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81175143|sp|P0ABB0|ATPA_ECOLI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81175144|sp|P0ABB3|ATPA_SHIFL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118573476|sp|Q0TAX5|ATPA_ECOL5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119367953|sp|Q1R4K0|ATPA_ECOUT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123146529|sp|Q0SYU2|ATPA_SHIF8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007210|sp|Q31UN4|ATPA_SHIBS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007211|sp|Q329S3|ATPA_SHIDS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124007212|sp|Q3YVN8|ATPA_SHISS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166990355|sp|A7ZTU6|ATPA_ECO24 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166990356|sp|A8A6J7|ATPA_ECOHS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081299|sp|B1IX04|ATPA_ECOLC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739875|sp|B7MGF4|ATPA_ECO45 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739876|sp|B5YXD8|ATPA_ECO5E RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739877|sp|B7NR36|ATPA_ECO7I RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739878|sp|B7M590|ATPA_ECO8A RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739879|sp|B1X9W2|ATPA_ECODH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739880|sp|B7NF50|ATPA_ECOLU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739881|sp|B6I3X1|ATPA_ECOSE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739882|sp|B1LL61|ATPA_ECOSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739885|sp|B7LK79|ATPA_ESCF3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807695|sp|B7UMJ9|ATPA_ECO27 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807696|sp|B7L884|ATPA_ECO55 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807697|sp|B7N2H3|ATPA_ECO81 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|259585426|sp|C4ZZ12|ATPA_ECOBW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|12518591|gb|AAG58937.1|AE005605_5 membrane-bound ATP synthase, F1 sector, alpha-subunit [Escherichia
           coli O157:H7 str. EDL933]
 gi|26110908|gb|AAN83092.1|AE016769_207 ATP synthase alpha chain [Escherichia coli CFT073]
 gi|290583|gb|AAA62086.1| ATP synthase F1 alpha subunit [Escherichia coli]
 gi|1790172|gb|AAC76757.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|13364151|dbj|BAB38099.1| membrane-bound ATP synthase alpha-subunit AtpA [Escherichia coli
           O157:H7 str. Sakai]
 gi|24054296|gb|AAN45254.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           flexneri 2a str. 301]
 gi|30043222|gb|AAP18943.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           flexneri 2a str. 2457T]
 gi|73857717|gb|AAZ90424.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           sonnei Ss046]
 gi|81243222|gb|ABB63932.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           dysenteriae Sd197]
 gi|81247516|gb|ABB68224.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           boydii Sb227]
 gi|85676304|dbj|BAE77554.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|91074833|gb|ABE09714.1| membrane-bound ATP synthase F1 sector alpha-subunit [Escherichia
           coli UTI89]
 gi|110345667|gb|ABG71904.1| ATP synthase alpha chain [Escherichia coli 536]
 gi|110617106|gb|ABF05773.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Shigella
           flexneri 5 str. 8401]
 gi|157068896|gb|ABV08151.1| ATP synthase F1, alpha subunit [Escherichia coli HS]
 gi|157077091|gb|ABV16799.1| ATP synthase F1, alpha subunit [Escherichia coli E24377A]
 gi|169757157|gb|ACA79856.1| ATP synthase F1, alpha subunit [Escherichia coli ATCC 8739]
 gi|169891070|gb|ACB04777.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170124429|gb|EDS93360.1| ATP synthase F1, alpha subunit [Escherichia albertii TW07627]
 gi|170520216|gb|ACB18394.1| ATP synthase F1, alpha subunit [Escherichia coli SMS-3-5]
 gi|187771496|gb|EDU35340.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016960|gb|EDU55082.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188487489|gb|EDU62592.1| ATP synthase F1, alpha subunit [Escherichia coli 53638]
 gi|189359155|gb|EDU77574.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364718|gb|EDU83137.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369503|gb|EDU87919.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373464|gb|EDU91880.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC869]
 gi|189378692|gb|EDU97108.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC508]
 gi|190904109|gb|EDV63820.1| ATP synthase F1, alpha subunit [Escherichia coli B7A]
 gi|190909362|gb|EDV68948.1| ATP synthase F1, alpha subunit [Escherichia coli F11]
 gi|192930575|gb|EDV83182.1| ATP synthase F1, alpha subunit [Escherichia coli E22]
 gi|192957529|gb|EDV87975.1| ATP synthase F1, alpha subunit [Escherichia coli E110019]
 gi|194413895|gb|EDX30173.1| ATP synthase F1, alpha subunit [Escherichia coli B171]
 gi|194420557|gb|EDX36633.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1012]
 gi|194425287|gb|EDX41271.1| ATP synthase F1, alpha subunit [Escherichia coli 101-1]
 gi|208726473|gb|EDZ76074.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208734563|gb|EDZ83250.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738430|gb|EDZ86112.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209162018|gb|ACI39451.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209753868|gb|ACI75241.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753870|gb|ACI75242.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753872|gb|ACI75243.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753874|gb|ACI75244.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209753876|gb|ACI75245.1| membrane-bound ATP synthase delta-subunit AtpH [Escherichia coli]
 gi|209914474|dbj|BAG79548.1| ATP synthase alpha subunit [Escherichia coli SE11]
 gi|215267144|emb|CAS11592.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217322838|gb|EEC31262.1| ATP synthase F1, alpha subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354192|emb|CAV00821.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli 55989]
 gi|218358810|emb|CAQ91467.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia fergusonii ATCC 35469]
 gi|218363074|emb|CAR00712.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli IAI1]
 gi|218367578|emb|CAR05362.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli S88]
 gi|218372570|emb|CAR20444.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli IAI39]
 gi|218429586|emb|CAR10544.2| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli ED1a]
 gi|218434477|emb|CAR15404.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli UMN026]
 gi|222035447|emb|CAP78192.1| ATP synthase subunit alpha [Escherichia coli LF82]
 gi|226838918|gb|EEH70945.1| ATP synthase F1, alpha subunit [Escherichia sp. 1_1_43]
 gi|226902799|gb|EEH89058.1| ATP synthase subunit alpha [Escherichia sp. 3_2_53FAA]
 gi|227839234|gb|EEJ49700.1| F0F1 ATP synthase subunit alpha [Escherichia coli 83972]
 gi|238861067|gb|ACR63065.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli BW2952]
 gi|242379272|emb|CAQ34079.1| ATP synthase, F1 complex, alpha subunit, subunit of alpha subunit
           complex, ATP synthase, F1 complex and ATP synthase
           [Escherichia coli BL21(DE3)]
 gi|253326675|gb|ACT31277.1| ATP synthase F1, alpha subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975587|gb|ACT41258.1| F0F1 ATP synthase subunit alpha [Escherichia coli B str. REL606]
 gi|253979743|gb|ACT45413.1| F0F1 ATP synthase subunit alpha [Escherichia coli BL21(DE3)]
 gi|254595140|gb|ACT74501.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli O157:H7 str. TW14359]
 gi|257756500|dbj|BAI28002.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O26:H11 str. 11368]
 gi|257761628|dbj|BAI33125.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O103:H2 str. 12009]
 gi|257766824|dbj|BAI38319.1| F1 sector of membrane-bound ATP synthase, alpha subunit AtpA
           [Escherichia coli O111:H- str. 11128]
 gi|260451409|gb|ACX41831.1| ATP synthase F1, alpha subunit [Escherichia coli DH1]
 gi|281180792|dbj|BAI57122.1| ATP synthase alpha subunit [Escherichia coli SE15]
 gi|281603132|gb|ADA76116.1| ATP synthase subunit alpha [Shigella flexneri 2002017]
 gi|284923848|emb|CBG36947.1| ATP synthase alpha subunit [Escherichia coli 042]
 gi|290765031|gb|ADD58992.1| ATP synthase subunit alpha [Escherichia coli O55:H7 str. CB9615]
 gi|291321692|gb|EFE61128.1| ATP synthase F1 [Escherichia coli B088]
 gi|291425662|gb|EFE98698.1| atpA [Escherichia coli FVEC1412]
 gi|291431238|gb|EFF04231.1| ATP synthase F1 [Escherichia coli B185]
 gi|291468317|gb|EFF10812.1| ATP synthase F1 [Escherichia coli B354]
 gi|294489685|gb|ADE88441.1| ATP synthase F1, alpha subunit [Escherichia coli IHE3034]
 gi|298276949|gb|EFI18467.1| ATP synthase subunit alpha [Escherichia coli FVEC1302]
 gi|299882058|gb|EFI90269.1| ATP synthase F1, alpha subunit [Escherichia coli MS 196-1]
 gi|300300543|gb|EFJ56928.1| ATP synthase F1, alpha subunit [Escherichia coli MS 185-1]
 gi|300306859|gb|EFJ61379.1| ATP synthase F1, alpha subunit [Escherichia coli MS 200-1]
 gi|300314623|gb|EFJ64407.1| ATP synthase F1, alpha subunit [Escherichia coli MS 175-1]
 gi|300360049|gb|EFJ75919.1| ATP synthase F1, alpha subunit [Escherichia coli MS 198-1]
 gi|300404979|gb|EFJ88517.1| ATP synthase F1, alpha subunit [Escherichia coli MS 84-1]
 gi|300408388|gb|EFJ91926.1| ATP synthase F1, alpha subunit [Escherichia coli MS 45-1]
 gi|300416301|gb|EFJ99611.1| ATP synthase F1, alpha subunit [Escherichia coli MS 115-1]
 gi|300418338|gb|EFK01649.1| ATP synthase F1, alpha subunit [Escherichia coli MS 182-1]
 gi|300450021|gb|EFK13641.1| ATP synthase F1, alpha subunit [Escherichia coli MS 116-1]
 gi|300454350|gb|EFK17843.1| ATP synthase F1, alpha subunit [Escherichia coli MS 21-1]
 gi|300459874|gb|EFK23367.1| ATP synthase F1, alpha subunit [Escherichia coli MS 187-1]
 gi|300522957|gb|EFK44026.1| ATP synthase F1, alpha subunit [Escherichia coli MS 119-7]
 gi|300531903|gb|EFK52965.1| ATP synthase F1, alpha subunit [Escherichia coli MS 107-1]
 gi|300839125|gb|EFK66885.1| ATP synthase F1, alpha subunit [Escherichia coli MS 124-1]
 gi|300848136|gb|EFK75896.1| ATP synthase F1, alpha subunit [Escherichia coli MS 78-1]
 gi|301077249|gb|EFK92055.1| ATP synthase F1, alpha subunit [Escherichia coli MS 146-1]
 gi|305850310|gb|EFM50767.1| F0F1 ATP synthase subunit alpha [Escherichia coli NC101]
 gi|306906877|gb|EFN37386.1| ATP synthase F1, alpha subunit [Escherichia coli W]
 gi|307555873|gb|ADN48648.1| ATP synthase alpha chain [Escherichia coli ABU 83972]
 gi|307628808|gb|ADN73112.1| F0F1 ATP synthase subunit alpha [Escherichia coli UM146]
 gi|308120588|gb|EFO57850.1| ATP synthase F1, alpha subunit [Escherichia coli MS 145-7]
 gi|308927952|gb|EFP73420.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 1617]
 gi|310334351|gb|EFQ00556.1| ATP synthase F1, alpha subunit [Escherichia coli 1827-70]
 gi|312287417|gb|EFR15325.1| ATP synthase F1, alpha subunit [Escherichia coli 2362-75]
 gi|312948300|gb|ADR29127.1| F0F1 ATP synthase subunit alpha [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313647650|gb|EFS12098.1| ATP synthase F1, alpha subunit [Shigella flexneri 2a str. 2457T]
 gi|315063044|gb|ADT77371.1| F1 sector of membrane-bound ATP synthase, alpha subunit
           [Escherichia coli W]
 gi|315138319|dbj|BAJ45478.1| ATP synthase subunit alpha [Escherichia coli DH1]
 gi|315254573|gb|EFU34541.1| ATP synthase F1, alpha subunit [Escherichia coli MS 85-1]
 gi|315285549|gb|EFU44991.1| ATP synthase F1, alpha subunit [Escherichia coli MS 110-3]
 gi|315292820|gb|EFU52172.1| ATP synthase F1, alpha subunit [Escherichia coli MS 153-1]
 gi|315296878|gb|EFU56167.1| ATP synthase F1, alpha subunit [Escherichia coli MS 16-3]
 gi|315618558|gb|EFU99144.1| ATP synthase F1, alpha subunit [Escherichia coli 3431]
 gi|320180084|gb|EFW55026.1| ATP synthase alpha chain [Shigella boydii ATCC 9905]
 gi|320186283|gb|EFW61019.1| ATP synthase alpha chain [Shigella flexneri CDC 796-83]
 gi|320191162|gb|EFW65812.1| ATP synthase alpha chain [Escherichia coli O157:H7 str. EC1212]
 gi|320193721|gb|EFW68354.1| ATP synthase alpha chain [Escherichia coli WV_060327]
 gi|320201234|gb|EFW75815.1| ATP synthase alpha chain [Escherichia coli EC4100B]
 gi|320639462|gb|EFX09077.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           G5101]
 gi|320644902|gb|EFX13938.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H- str.
           493-89]
 gi|320650168|gb|EFX18664.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H- str. H
           2687]
 gi|320655517|gb|EFX23452.1| F0F1 ATP synthase subunit alpha [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661140|gb|EFX28576.1| F0F1 ATP synthase subunit alpha [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666269|gb|EFX33275.1| F0F1 ATP synthase subunit alpha [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323155415|gb|EFZ41598.1| ATP synthase F1, alpha subunit [Escherichia coli EPECa14]
 gi|323161014|gb|EFZ46933.1| ATP synthase F1, alpha subunit [Escherichia coli E128010]
 gi|323167008|gb|EFZ52747.1| ATP synthase F1, alpha subunit [Shigella sonnei 53G]
 gi|323173359|gb|EFZ58988.1| ATP synthase F1, alpha subunit [Escherichia coli LT-68]
 gi|323177754|gb|EFZ63338.1| ATP synthase F1, alpha subunit [Escherichia coli 1180]
 gi|323189533|gb|EFZ74813.1| ATP synthase F1, alpha subunit [Escherichia coli RN587/1]
 gi|323380894|gb|ADX53162.1| ATP synthase F1, alpha subunit [Escherichia coli KO11]
 gi|323939203|gb|EGB35416.1| ATP synthase F1 [Escherichia coli E482]
 gi|323944210|gb|EGB40290.1| ATP synthase F1 [Escherichia coli H120]
 gi|323949977|gb|EGB45861.1| ATP synthase F1 [Escherichia coli H252]
 gi|323954971|gb|EGB50749.1| ATP synthase F1 [Escherichia coli H263]
 gi|323959800|gb|EGB55450.1| ATP synthase F1 [Escherichia coli H489]
 gi|323965802|gb|EGB61253.1| ATP synthase F1 [Escherichia coli M863]
 gi|323971213|gb|EGB66459.1| ATP synthase F1 [Escherichia coli TA007]
 gi|323975198|gb|EGB70302.1| ATP synthase F1 [Escherichia coli TW10509]
 gi|324008002|gb|EGB77221.1| ATP synthase F1, alpha subunit [Escherichia coli MS 57-2]
 gi|324012760|gb|EGB81979.1| ATP synthase F1, alpha subunit [Escherichia coli MS 60-1]
 gi|324018468|gb|EGB87687.1| ATP synthase F1, alpha subunit [Escherichia coli MS 117-3]
 gi|324111633|gb|EGC05614.1| ATP synthase F1 [Escherichia fergusonii B253]
 gi|324115910|gb|EGC09836.1| ATP synthase F1 [Escherichia coli E1167]
 gi|325499540|gb|EGC97399.1| F0F1 ATP synthase subunit alpha [Escherichia fergusonii ECD227]
 gi|326340518|gb|EGD64317.1| ATP synthase alpha chain [Escherichia coli O157:H7 str. 1044]
 gi|326341584|gb|EGD65373.1| ATP synthase alpha chain [Escherichia coli O157:H7 str. 1125]
 gi|327250886|gb|EGE62588.1| ATP synthase F1, alpha subunit [Escherichia coli STEC_7v]
 gi|330908047|gb|EGH36566.1| ATP synthase alpha chain [Escherichia coli AA86]
 gi|331036755|gb|EGI08981.1| ATP synthase F1, alpha subunit [Escherichia coli H736]
 gi|331042058|gb|EGI14202.1| ATP synthase F1, alpha subunit [Escherichia coli M605]
 gi|331047411|gb|EGI19489.1| ATP synthase F1, alpha subunit [Escherichia coli M718]
 gi|331053293|gb|EGI25326.1| ATP synthase F1, alpha subunit [Escherichia coli TA206]
 gi|331057898|gb|EGI29884.1| ATP synthase F1, alpha subunit [Escherichia coli TA143]
 gi|331062646|gb|EGI34566.1| ATP synthase F1, alpha subunit [Escherichia coli TA271]
 gi|331067665|gb|EGI39067.1| ATP synthase F1, alpha subunit [Escherichia coli TA280]
 gi|331073010|gb|EGI44335.1| ATP synthase F1, alpha subunit [Escherichia coli H591]
 gi|331077832|gb|EGI49044.1| ATP synthase F1, alpha subunit [Escherichia coli H299]
 gi|332084750|gb|EGI89936.1| ATP synthase F1, alpha subunit [Shigella dysenteriae 155-74]
 gi|332089556|gb|EGI94660.1| ATP synthase F1, alpha subunit [Shigella boydii 3594-74]
 gi|332104823|gb|EGJ08169.1| F1 sector of membrane-bound ATP synthase alpha subunit [Shigella
           sp. D9]
 gi|332345724|gb|AEE59058.1| ATP synthase F1, alpha subunit AtpA [Escherichia coli UMNK88]
 gi|332750743|gb|EGJ81151.1| ATP synthase F1, alpha subunit [Shigella flexneri 4343-70]
 gi|332750903|gb|EGJ81309.1| ATP synthase F1, alpha subunit [Shigella flexneri K-671]
 gi|332751682|gb|EGJ82080.1| ATP synthase F1, alpha subunit [Shigella flexneri 2747-71]
 gi|332764009|gb|EGJ94246.1| ATP synthase F1, alpha subunit [Shigella flexneri 2930-71]
 gi|332995981|gb|EGK15608.1| ATP synthase F1, alpha subunit [Shigella flexneri VA-6]
 gi|332997173|gb|EGK16789.1| ATP synthase F1, alpha subunit [Shigella flexneri K-218]
 gi|332998042|gb|EGK17647.1| ATP synthase F1, alpha subunit [Shigella flexneri K-272]
 gi|333013456|gb|EGK32827.1| ATP synthase F1, alpha subunit [Shigella flexneri K-304]
 gi|333013708|gb|EGK33073.1| ATP synthase F1, alpha subunit [Shigella flexneri K-227]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|89112886|gb|ABD61055.1| ATPase alpha subunit [Euphorbia milii var. splendens]
          Length = 380

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 90/377 (23%), Positives = 161/377 (42%), Gaps = 19/377 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + ++ + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLDNENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILEEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 240 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLKVMKEVCGSLKLELAQYRE---VAAFAQFGSDLDAATQ 356

Query: 405 KAVHQVPIIYDFLKQSP 421
             +++   + + LKQ  
Sbjct: 357 ALLNRGARLTEVLKQPQ 373


>gi|27461581|gb|AAM95207.1| ATPase F1 alpha subunit [Eriocaulon humboldtii]
          Length = 417

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 90/408 (22%), Positives = 162/408 (39%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L + +  G+ V      S   G    +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLDE-IQAGEMVEF---TSGVKGIAFNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG P+DG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPLDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKGTESETLYCVYVAIG 176

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++          S++V AT+ +   L+ +AP +   + E F     + L+I
Sbjct: 177 QKRSTVAQLVQILEEAMAMEYSILVAATASDPAPLQFLAPYSGCAMGEDFRDNSMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|164685616|gb|ABY66754.1| atp1 [Jasminum floridum]
          Length = 413

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  SL   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGRGSLSAHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|6561677|gb|AAF17021.1|AF197689_1 ATPase alpha subunit [Hedycarya arborea]
          Length = 419

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 171/416 (41%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|56417187|ref|YP_154261.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str. St.
           Maries]
 gi|222475552|ref|YP_002563969.1| F1-ATP synthase alpha subunit (atpA) [Anaplasma marginale str.
           Florida]
 gi|254995355|ref|ZP_05277545.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str.
           Mississippi]
 gi|255004668|ref|ZP_05279469.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str. Virginia]
 gi|81599091|sp|Q5P9M4|ATPA_ANAMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807671|sp|B9KH09|ATPA_ANAMF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56388419|gb|AAV87006.1| F1-ATP synthase alpha subunit [Anaplasma marginale str. St. Maries]
 gi|222419690|gb|ACM49713.1| F1-ATP synthase alpha subunit (atpA) [Anaplasma marginale str.
           Florida]
          Length = 507

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 183/439 (41%), Gaps = 23/439 (5%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L+ L +  E +   +     G + +I      V  LS  V  G+ V     +S   G V 
Sbjct: 10  LKILKERIEGFDSPVKTSSVGDVVAIKDGIALVYGLS-GVKFGETVAF---SSGVRGVVA 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            +  D   +   G   EI  GD V   G     P+     GRV+N LG P+DG +++   
Sbjct: 66  GLERDTCSVVVFGEDREIREGDSVQCTGELMTVPAGLSVLGRVVNPLGSPVDGGNAIV-A 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           D  + + +K P  M RQ V +  +TGI+ +D+  P+  GQR  V      GK      T+
Sbjct: 125 DSRLPVEAKAPGIMARQPVCEPLQTGIKTVDMLIPIGRGQRELVIGDRKTGKTAIALDTI 184

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++    +D  D       I   +G++   +   +           ++VV A + +   ++
Sbjct: 185 INQKKTNDTADAKNRMYCIYVAIGQKNSSIARVVHKLKETGAMDYTIVVAAGASDPVSIQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 245 YLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHS 304

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +G  P
Sbjct: 305 RLLERAAKLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFHKGFRP 364

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  S+   + ++ E  D    G     +D      + +
Sbjct: 365 AINVGLSVSRVGSAAQVKSVKKVAGSMKLTLAQYRELEDFARFG---SDLDPSSQAMLEK 421

Query: 410 VPIIYDFLKQSPSDLSSED 428
                + LKQ      S +
Sbjct: 422 GRRFMELLKQGQYSPLSVE 440


>gi|50120656|ref|YP_049823.1| flagellum-specific ATP synthase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611182|emb|CAG74628.1| flagellum-specific ATP synthase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 457

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 158/447 (35%), Positives = 244/447 (54%), Gaps = 20/447 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL---- 59
           +L++  +  +D     V + G ++  T +    T L  ++ LG   + + +N   +    
Sbjct: 12  SLDSFEKRIDDTPS--VRRYGRLTRATGLVLEATGL--HMPLGATCLIERQNGSKVEEIE 67

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGR------FRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I+ G  V+   G+       ++       GRV++   KP
Sbjct: 68  SEVVGFNGQKLFLMPLEEVEGITPGARVYARVGQDSSSQGKQLPLGPELLGRVLDGSAKP 127

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  ++     G+R I+    +  GQR+G+FAGSG+
Sbjct: 128 LDGLPAPDTG-YRAPLITPPVNPLQRTAIDSVLDVGVRAINALLTVGRGQRMGLFAGSGV 186

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 187 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIAAPADVSPLLR 246

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 247 MQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 306

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +
Sbjct: 307 ALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAI 366

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        D    V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 367 DIEASISRAMTALIDEDHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDPMLDKAIRLYP 426

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +  FL+Q   + S    ++E  + L 
Sbjct: 427 HLEAFLQQGMFEQSD---YEESCQALH 450


>gi|295665480|ref|XP_002793291.1| ATPase alpha subunit [Paracoccidioides brasiliensis Pb01]
 gi|226278205|gb|EEH33771.1| ATPase alpha subunit [Paracoccidioides brasiliensis Pb01]
          Length = 465

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/392 (23%), Positives = 168/392 (42%), Gaps = 21/392 (5%)

Query: 47  DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRV 105
           + V     +S   G  + +    V +   G    +  G+ V   G    +       GRV
Sbjct: 6   ELVEF---SSGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVPVGPELLGRV 62

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           ++ALG PIDG   +   +       K P  + R+ V +  +TG++ +D   P+  GQR  
Sbjct: 63  VDALGNPIDGKGPIKTSEKRRA-QLKAPGILPRRSVNQPVQTGLKSVDSMVPIGRGQREL 121

Query: 166 VFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK 215
           +      GK       +L+    +D  D       +   VG++   V + ++    ++  
Sbjct: 122 IIGDRQTGKTAVALDAMLNQKRWNDTGDETKKLYCVYVAVGQKRSTVAQLVKTLEENDAM 181

Query: 216 K-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           K S++V AT+ E+  L+ +AP T   + E+F   G + L+I D +++ A + R+++    
Sbjct: 182 KYSIIVAATASEAAPLQYIAPFTGCAMGEWFRDNGRHALIIYDDLSKQAVAYRQMSLLLR 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    YP  VF    RLLER      +   G++TA+  +   G + +  I  +V SI 
Sbjct: 242 RPPGREAYPGDVFYLHSRLLERAAKLNDKHKGGSLTALPVIETQGGDVSAYIPTNVISIT 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I L   L  +G  P ++   SVSR+   A     K++  SL   + ++ E   +   
Sbjct: 302 DGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQYRE---VAAF 358

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             +   +D    + +++   + + LKQ     
Sbjct: 359 AQFGSDLDASTKQTLNRGERLTELLKQKQYQP 390


>gi|323256480|gb|EGA40213.1| type III secretion system ATPase SsaN [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
          Length = 392

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 158/395 (40%), Positives = 224/395 (56%), Gaps = 8/395 (2%)

Query: 45  LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCG 103
           +G+      K  + L +V+ IN     + P      +  G  V    R  ++       G
Sbjct: 1   MGELCCI--KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLG 58

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RVI+  G+P+DG +         + M   PPAM RQ + +   TGIR ID       GQR
Sbjct: 59  RVIDGFGRPLDGRELPDVCWKDYDAM--PPPAMVRQPITQPLMTGIRAIDSVATCGEGQR 116

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVA 222
           +G+F+  G+GKSTLL+M   +   D  ++ L+GERGREVREFI      +  K+ V+VVA
Sbjct: 117 VGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVA 176

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           TSD   + R  A   A TIAE+F   G  V+L+ DS+TR+A + REIA  +GE  V+  Y
Sbjct: 177 TSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEY 236

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  VFS LPRLLER G  EK  G+ITA  +VLV+GD+ N+P+AD VRS+LDGHIVL+R L
Sbjct: 237 PPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRL 294

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D LA++SR+     S + ++L + L   +  ++E   +  IG Y+ GVD  
Sbjct: 295 AERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTD 354

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            DKA+   P I  FL+QS  ++   ++  E   ++
Sbjct: 355 TDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQI 389


>gi|119476318|ref|ZP_01616669.1| flagellum-specific ATP synthase [marine gamma proteobacterium
           HTCC2143]
 gi|119450182|gb|EAW31417.1| flagellum-specific ATP synthase [marine gamma proteobacterium
           HTCC2143]
          Length = 474

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 145/409 (35%), Positives = 235/409 (57%), Gaps = 6/409 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPV 75
           +      G +  +  +   V  L   + +G   +    +  ++  +V+  + + +++ P+
Sbjct: 23  QTRSRVSGRLVRVVGMTLEVVGLE--LSIGCRCLVMHDDQRSVEAEVVGFSEEKLFLMPI 80

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                +  G  V       ++       GRVI+  G+P+D    LG  D S+++ +++  
Sbjct: 81  EPVTGLKPGMAVVPVAYEDKVPVGIQLLGRVIDGAGRPLDSKGPLGCTD-SVDMQAELIN 139

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R+ + +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ L
Sbjct: 140 PLQRKPISEVLDVGIRAINSVLTVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGL 199

Query: 195 VGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREV+EFIE     + L ++VVV + +D++P++R  A + A  IAE F  +G +VL
Sbjct: 200 VGERGREVKEFIEQVLDEEGLSRAVVVASPADDAPLMRMRAAMLATRIAESFRDQGKHVL 259

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + REIA + GE P  +GYP SVF+++P+L+ER G      G++TA  +V
Sbjct: 260 LLMDSLTRFAQAQREIALSIGEPPATKGYPPSVFAKIPQLVERAGNGADGSGSVTAFYTV 319

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L +GD+  DP+AD+ R+ILDGHIVL+R+LA+EG YP +D  AS+SR      + +     
Sbjct: 320 LTEGDDMQDPVADAARAILDGHIVLSRALADEGHYPAIDVEASISRAMPNIITGEHLAAA 379

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             L HL  R++++RD+  +G Y  G D   D A+ ++P I  FL+Q   
Sbjct: 380 RRLRHLYSRYQQSRDLISVGAYVAGSDTETDAAIERLPAIRRFLQQDLD 428


>gi|323934915|gb|EGB31293.1| ATP synthase F1 [Escherichia coli E1520]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|300719164|ref|YP_003743967.1| ATP synthase, F1 complex, alpha subunit [Erwinia billingiae Eb661]
 gi|299065000|emb|CAX62120.1| ATP synthase, F1 complex, alpha subunit [Erwinia billingiae Eb661]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVNGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +      N    ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|34539447|gb|AAQ74607.1| F1-ATPase alpha subunit [Strelitzia nicolai]
          Length = 412

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 167/410 (40%), Gaps = 21/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 357 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 403


>gi|228016434|gb|ACP51266.1| ATP synthase CF1 alpha subunit [Pinus torreyana subsp. insularis]
          Length = 507

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 175/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG   +   +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGKISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +     ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVXEPLQXXXIAIDSMXPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|164685612|gb|ABY66752.1| atp1 [Ilex opaca]
          Length = 413

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   VG+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAVGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|164685590|gb|ABY66741.1| atp1 [Croton alabamensis]
          Length = 413

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGRAMLGRVVDALGVPIDGRGALGDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|124004917|ref|ZP_01689760.1| ATP synthase F1, alpha subunit [Microscilla marina ATCC 23134]
 gi|123989595|gb|EAY29141.1| ATP synthase F1, alpha subunit [Microscilla marina ATCC 23134]
          Length = 532

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 172/443 (38%), Gaps = 37/443 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   ++  + + G +  I      V  LS+ V  G+ VV         G V+ +  D
Sbjct: 15  EQLSNFQTEAELEEVGTVLQIGDGVARVYGLSK-VQAGELVVFANG---LRGLVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS-M 126
            V +   G   +I  GD V        I       GRV+N L  PID  +   +G+L  M
Sbjct: 71  NVGVVLFGDSSDIKEGDTVKRTKEIASIKVGEGIVGRVVNTLANPIDDRERPIEGELYDM 130

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +  K P  + RQ V++  +TGI+ ID   P+  GQR  +      GK+ +      +  
Sbjct: 131 PLERKAPGVIYRQPVDEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAVAIDTIINQK 190

Query: 187 F-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
                      I   +G++   V + ++          + VV A++ +   ++  AP T 
Sbjct: 191 EFYDRGEPVYCIYVAIGQKASTVAQVVKSLTDAGAMSYTTVVSASASDPAPMQFFAPFTG 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER  
Sbjct: 251 AAIGEYFRDTGRPALVIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAA 310

Query: 299 PSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
              +                      G++TA+  +     + +  I  +V SI DG I L
Sbjct: 311 KISESDDIAQQMNDVPPSLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFL 370

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P ++   SVSR+   A     KK+  +L     +F E         +   
Sbjct: 371 ETNLFNSGIRPAINVGISVSRVGGAAQIKTMKKVAGTLKLDQAQFRELE---AFAKFGSD 427

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      + +     + LKQ  
Sbjct: 428 LDAATQLTIEKGRKNLEVLKQGQ 450


>gi|312174355|emb|CBX82608.1| ATP synthase F1, alpha subunit [Erwinia amylovora ATCC BAA-2158]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 59  --RYAIALNLERDSVGAVVMGPYADLAEGMTVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +      N    ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHNALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|212637835|ref|YP_002314360.1| F0F1 ATP synthase subunit alpha [Shewanella piezotolerans WP3]
 gi|226739939|sp|B8CVU7|ATPA_SHEPW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|212559319|gb|ACJ31773.1| ATP synthase F1, alpha subunit [Shewanella piezotolerans WP3]
          Length = 513

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYATLAEGDKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPID-SDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLER-------------IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERSSRVNAEYVEKFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|293363620|ref|ZP_06610375.1| ATP synthase F1, alpha subunit [Mycoplasma alligatoris A21JP2]
 gi|292552817|gb|EFF41572.1| ATP synthase F1, alpha subunit [Mycoplasma alligatoris A21JP2]
          Length = 525

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 114/438 (26%), Positives = 190/438 (43%), Gaps = 19/438 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M   L+ ++ +  D  KN        + G + SI      V  L + V   + VV    N
Sbjct: 1   MANKLQDISAIIRDKIKNFDSKIDYAEIGRVISIGDGIALVNGL-ENVMNSEIVVF---N 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +  G  + +  ++V +   G    IS GD+V   G+   +       GRVI++LG PID
Sbjct: 57  ENTYGLALNLEEEVVGVTIFGDITSISEGDIVKRTGKVISVGVGDKMLGRVIDSLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K   + EI       M+R+ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KTTKTREIFRVASGVMSRKEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K +   +G++   V + ++        + + +VV+ + E    +
Sbjct: 176 TAIAIDTIINQKGKDVKCVYVAIGQKNSTVAQIVKKLADTGALEYTTIVVSGASELAPQQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTIAE +  KG +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYTGVTIAEEWMEKGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPS--EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER      E   G+ITA+  +     + +  I  +V SI DG I    +L   G+ P
Sbjct: 296 QLLERAARVTKENGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+V SL   + ++ E   +     +   +D      ++ 
Sbjct: 356 AVDVGFSVSRVGSAAQIKAMKKVVGSLKLELAQYNE---MLAFAQFGSDLDDSTKTILNH 412

Query: 410 VPIIYDFLKQSPSDLSSE 427
              +Y+ LKQ      S+
Sbjct: 413 GAKVYELLKQEQYQPISQ 430


>gi|170696754|ref|ZP_02887866.1| flagellar protein export ATPase FliI [Burkholderia graminis C4D1M]
 gi|170138333|gb|EDT06549.1| flagellar protein export ATPase FliI [Burkholderia graminis C4D1M]
          Length = 555

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 154/444 (34%), Positives = 238/444 (53%), Gaps = 18/444 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIR 64
           A  A +     +   G ++    +      L   + +G  V+ +     +L     +V+ 
Sbjct: 110 ALRARNAIAKPMRACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPLGSSLPMAEAEVVG 167

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPID 114
            + D +++ P      +  G  V+            G  R+       GRV++A G+P+D
Sbjct: 168 FSGDKLFLMPTTEVIGLLPGARVYPLESAPIADPMAGAKRLPVGWELLGRVLDASGRPLD 227

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   LG       + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 228 GLGPLGAH-ADAPLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGK 286

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           S LL   AR    + ++I L+GERGREV+EFI +    + L +SVV+ A +D SP+LR  
Sbjct: 287 SVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQ 346

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L
Sbjct: 347 AAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPAL 406

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D 
Sbjct: 407 VERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDI 466

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR        +          ++ R++  RD+  +G Y  G D +LD+A+   P +
Sbjct: 467 EASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRM 526

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL+Q   + ++ +   E+   L
Sbjct: 527 EAFLQQGFRECANFEPSIEMLDAL 550


>gi|126455566|ref|YP_001075932.1| type III secretion system ATPase [Burkholderia pseudomallei 1106a]
 gi|242311290|ref|ZP_04810307.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
 gi|254301611|ref|ZP_04969055.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
 gi|48479050|gb|AAT44848.1| ATP synthase [Burkholderia pseudomallei]
 gi|126229334|gb|ABN92747.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106a]
 gi|157810751|gb|EDO87921.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 406e]
 gi|242134529|gb|EES20932.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia pseudomallei 1106b]
          Length = 449

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 239/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 11  EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG P+DG   
Sbjct: 69  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGAPLDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 129 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 308 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 366 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 425

Query: 418 KQSPSDL-SSEDVFQEI 433
            Q   D  ++ED    +
Sbjct: 426 SQRTDDYAAAEDTIARL 442


>gi|296157435|ref|ZP_06840270.1| flagellar protein export ATPase FliI [Burkholderia sp. Ch1-1]
 gi|295892207|gb|EFG71990.1| flagellar protein export ATPase FliI [Burkholderia sp. Ch1-1]
          Length = 552

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 155/444 (34%), Positives = 239/444 (53%), Gaps = 18/444 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIR 64
           A  A +     +   G ++    +      L   + +G  V+ +     +L     +V+ 
Sbjct: 107 ALRARNAIAKPMRACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPQGSSLPMAEAEVVG 164

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPID 114
            + D +++ P      +  G  VF            G  R+       GRV++A G+P+D
Sbjct: 165 FSGDKLFLMPTTEVIGLLPGARVFPLESAPIADPMAGAKRLPVGWELLGRVLDASGRPLD 224

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   LG       + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 225 GLGPLGAH-ADAPLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGK 283

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           S LL   AR    + ++I L+GERGREV+EFI +    + L +SVV+ A +D SP+LR  
Sbjct: 284 SVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQ 343

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L
Sbjct: 344 AASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPAL 403

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D 
Sbjct: 404 VERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDI 463

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR        +  +       ++ R++  RD+  +G Y  G D +LD+A+   P +
Sbjct: 464 EASISRAMTALIDDNHLEKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRM 523

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL+Q   + ++ +   E+   L
Sbjct: 524 EAFLQQGFRECANFEPSLEMLDAL 547


>gi|37681437|ref|NP_936046.1| F0F1 ATP synthase subunit alpha [Vibrio vulnificus YJ016]
 gi|326423792|ref|NP_759980.2| ATP synthase F1 subunit alpha [Vibrio vulnificus CMCP6]
 gi|81756323|sp|Q7MGH8|ATPA_VIBVY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|37200189|dbj|BAC96017.1| F0F1-type ATP synthase, alpha subunit [Vibrio vulnificus YJ016]
 gi|319999158|gb|AAO09507.2| ATP synthase F1, alpha subunit [Vibrio vulnificus CMCP6]
          Length = 523

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/456 (22%), Positives = 189/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 68

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 69  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 127 GKGPI-EAKLTSPVEVIAPGVIDRQSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 186 TAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNAEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + ++    + + +KQ     +   VF +  
Sbjct: 423 LDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|6561689|gb|AAF17033.1|AF197701_1 ATPase alpha subunit [Gyrocarpus sp. Chase 317]
          Length = 420

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 93/415 (22%), Positives = 171/415 (41%), Gaps = 22/415 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 2   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 57

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 58  GDLVKRTGSIVDVPAGKAMLGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 116

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVII 192
           +  +TG++ +D   P+  GQR  +      GK+ +          ++           + 
Sbjct: 117 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTESETLYCVY 176

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 177 VAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 236

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA
Sbjct: 237 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTA 296

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     
Sbjct: 297 LPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAM 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 KQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 408


>gi|1381685|gb|AAB02741.1| F1-ATPase alpha subunit [Calamus usitatus]
          Length = 425

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 167/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 3   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIAVFGSDTAIKE 58

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  M R+ V 
Sbjct: 59  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIMERKSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 118 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 178 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 238 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 298 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 358 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 407


>gi|15596301|ref|NP_249795.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PAO1]
 gi|107100555|ref|ZP_01364473.1| hypothetical protein PaerPA_01001580 [Pseudomonas aeruginosa PACS2]
 gi|116049033|ref|YP_792165.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892932|ref|YP_002441801.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa LESB58]
 gi|254239473|ref|ZP_04932795.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 2192]
 gi|296390530|ref|ZP_06880005.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PAb1]
 gi|313106066|ref|ZP_07792324.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 39016]
 gi|81541593|sp|Q9I4N1|FLII_PSEAE RecName: Full=Flagellum-specific ATP synthase
 gi|9947021|gb|AAG04493.1|AE004540_13 flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa PAO1]
 gi|115584254|gb|ABJ10269.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192851|gb|EAZ56914.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 2192]
 gi|218773160|emb|CAW28972.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa
           LESB58]
 gi|310878826|gb|EFQ37420.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 39016]
          Length = 451

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 156/450 (34%), Positives = 242/450 (53%), Gaps = 21/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+    + A+  E Y++ +      V  G +  +  +      L     +G       ++
Sbjct: 1   MRLERTSFARRLEGYTEAVSLPAQPVVEGRLLRMVGLTLEAEGL--QAAVGSRCNVINES 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINA 108
                    +V+  +   VY+ PVG    I+ G  V      GR          GRV++ 
Sbjct: 59  GYHPVQVEAEVMGFSGSKVYLMPVGSLAGIAPGARVVPLPDTGRL--PMGMSMLGRVLDG 116

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
            G+ +DG   +   D  + +       + R  + +    GIR I+    +  GQR+G+FA
Sbjct: 117 AGRALDGKGGMRAEDW-VPMDGPTINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFA 175

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDES 227
           G+G+GKS LL M  R    D +++ L+GERGREV+EFI++ LG+  LK+SVVV + +D++
Sbjct: 176 GTGVGKSVLLGMMTRFTRADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDA 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R  A      IAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF
Sbjct: 236 PLMRLRAAQYCTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVF 295

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++LP+L+ER G +E   G+ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG 
Sbjct: 296 AKLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGH 355

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  AS+SR+  +   A+  +       L  R++++RD+  +G Y  G D   D A+
Sbjct: 356 YPAIDIEASISRVMPQVVEAEHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDPETDLAI 415

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            + P++  FL+Q   +    +   E   +L
Sbjct: 416 ARFPVMRQFLRQGLDE---SESLAESRARL 442


>gi|255003542|ref|ZP_05278506.1| F0F1 ATP synthase subunit alpha [Anaplasma marginale str. Puerto
           Rico]
          Length = 507

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 183/439 (41%), Gaps = 23/439 (5%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L+ L +  E +   +     G + +I      V  LS  V  G+ V     +S   G V 
Sbjct: 10  LKILKERIEGFDSPVKTSSVGDVVAIKDGIALVYGLS-GVKFGETVAF---SSGVRGVVA 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            +  D   +   G   EI  GD V   G     P+     GRV+N LG P+DG +++   
Sbjct: 66  GLERDTCSVVVFGEDREIREGDSVQCTGELMTVPAGLSVLGRVVNPLGSPVDGGNAIV-A 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           D  + + +K P  M RQ V +  +TGI+ +D+  P+  GQR  V      GK      T+
Sbjct: 125 DSRLPVEAKAPGIMARQPVCEPLQTGIKTVDMLIPIGRGQRELVIGDRKTGKTAIALDTI 184

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++    +D  D       I   +G++   +   +           ++VV A + +   ++
Sbjct: 185 INQKKTNDTADAKNRMYCIYVAIGQKNSSIARVVHKLKETGAMDYTIVVAAGASDPVSIQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 245 YLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHS 304

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +G  P
Sbjct: 305 RLLERAAKLSDDLGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFHKGFRP 364

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  S+   + ++ E  D    G     +D      + +
Sbjct: 365 AINVGLSVSRVGSAAQVKSVKKVAGSMKLTLAQYRELEDFARFG---SDLDPSSQAMLEK 421

Query: 410 VPIIYDFLKQSPSDLSSED 428
                + LKQ      S +
Sbjct: 422 GRRFMELLKQGQYSPLSVE 440


>gi|332084600|gb|EGI89794.1| ATP synthase F1, alpha subunit [Shigella boydii 5216-82]
          Length = 513

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIISVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|219847908|ref|YP_002462341.1| F0F1 ATP synthase subunit alpha [Chloroflexus aggregans DSM 9485]
 gi|254807687|sp|B8G6G8|ATPA_CHLAD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219542167|gb|ACL23905.1| ATP synthase F1, alpha subunit [Chloroflexus aggregans DSM 9485]
          Length = 522

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 21/425 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V  G + ++      ++ L Q V   + +F    G+N    G  + +  D V    +G  
Sbjct: 27  VNVGTVIAVGDGVARLSGLDQVVASEIVEFPPKAGRNESIYGIALNLEQDSVAAIILGDD 86

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E I  GDLV   GR   +       GRV+N LG+PIDG   + + +    I    P  + 
Sbjct: 87  ESIEEGDLVTSTGRVISVPVGQGLLGRVVNPLGQPIDGKGPI-QYEKMRPIERIAPGVIT 145

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLV 195
           R+ V+   +TGI  ID   P+  GQR  +      GK+ +      +        I   +
Sbjct: 146 RKSVDTPVQTGIIAIDALIPIGRGQRELIIGDRQTGKTAVAIDTIINQKGQGMVCIYVAI 205

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG----- 249
           G+R  +V + +           ++VV AT+ ES  L+ +AP     + E     G     
Sbjct: 206 GQRRAQVAQVVGTLEKYGAMEYTIVVSATASESAALQYIAPYAGCAMGEEIMENGVMLNG 265

Query: 250 ---DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
               + L++ D +++ A + R+++      P    YP  VF    RLLER     +E   
Sbjct: 266 QLVKDALIVYDDLSKHAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLNEEYGG 325

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +    ++ +  I  +V SI DG I L   L   G+ P ++   SVSR+   A
Sbjct: 326 GSLTALPVIETQANDVSAYIPTNVISITDGQIYLEADLFNAGQRPALNVGISVSRVGSAA 385

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD- 423
            +   + +   L   + +F   RD+     +   +D      + +   + + LKQ     
Sbjct: 386 QTRAMRAVAGKLKGELAQF---RDLAAFAQFASDLDATTKAQIERGQRLQELLKQPQFQP 442

Query: 424 LSSED 428
           L+ ED
Sbjct: 443 LAVED 447


>gi|310641546|ref|YP_003946304.1| flagellar protein export atpase flii [Paenibacillus polymyxa SC2]
 gi|309246496|gb|ADO56063.1| Flagellar protein export ATPase FliI [Paenibacillus polymyxa SC2]
          Length = 439

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 156/422 (36%), Positives = 246/422 (58%), Gaps = 9/422 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYI 72
              + V   G ++ +  +   V        +GD   ++ GK +  L  +V+    + V +
Sbjct: 14  RQLDPVRVNGKVTQVIGLM--VESEGPDASIGDVCYIYPGKAAKPLQAEVVGFRDNKVLL 71

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P+G  + I  G  V   G+   +   +   G+V++ LG+P+DG   +          + 
Sbjct: 72  MPLGELQSIGPGCDVVGTGKPLNVQVGSELLGKVLDGLGQPLDGS-LIPSRMARYSTFNI 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               +NR RV++    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +
Sbjct: 131 PSNPLNRPRVQEPISIGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMIARNTEADVNV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREV +FI  D   + L++SVV+VATSD+  ++R    L A TIAEYF  +G 
Sbjct: 191 IALIGERGREVLDFIERDLGPEGLERSVVIVATSDQPALIRIKGALIATTIAEYFRDRGL 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NV+L++DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G      G+ITA 
Sbjct: 251 NVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GSITAF 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A +G +P +D LAS+SR+     + D+ 
Sbjct: 309 YTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANKGHFPAIDVLASISRVMKDIATRDQI 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
               ++  L+  ++++ D+  IG Y+ G +  +D+++ ++  I+DF +Q   + +  D  
Sbjct: 369 DAAENIKRLMAIYKDSEDLINIGAYQQGSNAEIDESMERIRDIWDFTRQRTDEKAELDEV 428

Query: 431 QE 432
           +E
Sbjct: 429 RE 430


>gi|167567954|ref|ZP_02360870.1| type III secretion system ATPase [Burkholderia oklahomensis EO147]
 gi|167573172|ref|ZP_02366046.1| type III secretion system ATPase [Burkholderia oklahomensis C6786]
          Length = 449

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 164/437 (37%), Positives = 240/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAED--YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E    + + VV+ G +         V+ +   V LG+    +      L  
Sbjct: 11  EFNRLADAIEQEILASSSVVRTGRVLEAIGTLIKVSGID--VALGELCELRTPEGRLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P     +IS    V   G    I       GRVI+ LG+P+DG   
Sbjct: 69  AEVVGFTRDVALLSPFSQLGQISRATQVIGLGHPLSIPVGDALLGRVIDGLGEPLDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    + +  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 129 I-ASETLQPLTAAPPDPMSRRMIDVPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E  LG D + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFVELILGPDGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E   G+ITA+ +VL + D+ +DP+A+ VR ILDGH++L+R +A + +YP +D LAS+
Sbjct: 308 GMGET--GSITALYTVLAEDDSGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLASL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 366 SRVMPLVVDDGHMRATARIRELMAQHREVEVLLQIGEYKAGANPLADEAIAKADAIRAFF 425

Query: 418 KQSPSDLS-SEDVFQEI 433
            Q   D S +EDV   +
Sbjct: 426 SQRTDDFSAAEDVVARL 442


>gi|167742980|ref|ZP_02415754.1| type III secretion system ATPase [Burkholderia pseudomallei 14]
          Length = 449

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 239/437 (54%), Gaps = 12/437 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 11  EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG P+DG   
Sbjct: 69  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGAPLDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 129 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 308 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F 
Sbjct: 366 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 425

Query: 418 KQSPSDL-SSEDVFQEI 433
            Q   D  ++ED    +
Sbjct: 426 SQRTDDYAAAEDTVARL 442


>gi|34539299|gb|AAQ74533.1| F1-ATPase alpha subunit [Euterpe oleracea]
          Length = 417

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/412 (22%), Positives = 167/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 404


>gi|89094452|ref|ZP_01167392.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92]
 gi|89081344|gb|EAR60576.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92]
          Length = 463

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 152/444 (34%), Positives = 239/444 (53%), Gaps = 12/444 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDN 58
           M K  E L++       ++  Q  G I+ +     T+  +     +G+   +        
Sbjct: 1   MSKLFERLSRHRSIAFASVKPQVIGRITRMIG--LTIEAVGIKCAVGECCSIVLSPEQHI 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  + D +Y+ P+   E +  G  V      G   +       GRV+N +GKPIDG
Sbjct: 59  EAEVVGFSGDRIYLMPLYPIEGLQAGTPVIARADTG--MVPVGMNLLGRVLNGVGKPIDG 116

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +  ++   + R  + +    GIR I+    +  GQR+G+FAGSG+GKS
Sbjct: 117 KGPLRP-EAETGLAGEIINPLLRAPINQTLDVGIRTINSLLTVGRGQRMGLFAGSGVGKS 175

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    + +++ L+GERGREV+EFI      + LK+SVVV + +D+SP++R  A
Sbjct: 176 VLLGMMTRFTEAEIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDSPLMRLRA 235

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              +  IAEYF  +G NVLL++DS+TR+A + REIA   GE P  +GYP SVF+++P+L+
Sbjct: 236 SQLSTRIAEYFRDQGKNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKIPKLV 295

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +++  G ITA  +VL +GD+  DP+ADS R+ILDGH+VL R LAE+G YP +D  
Sbjct: 296 ERAGNAQEGGGAITAFYTVLTEGDDQQDPVADSARAILDGHVVLARRLAEQGHYPAIDVE 355

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR   +    D  K+      L  ++ +  D+  +G Y  G D   D  +  +P + 
Sbjct: 356 ASISRAMPQIIEPDHLKMAMRFKQLYSKYRQNEDLINVGAYVKGSDPDTDFVIENLPSMN 415

Query: 415 DFLKQSPSD-LSSEDVFQEITKKL 437
            FL+Q   + +  +   Q++   L
Sbjct: 416 AFLRQDIGEPVPLQLSMQQMVMIL 439


>gi|145516222|ref|XP_001444005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411405|emb|CAK76608.1| unnamed protein product [Paramecium tetraurelia]
          Length = 530

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 107/435 (24%), Positives = 181/435 (41%), Gaps = 34/435 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  ++ ++QL      N + + G + SI      V  L+Q V  G+ V     +S   G
Sbjct: 34  LEDKIKNISQL------NDIKEYGTVISIGDGIARVFGLTQ-VQAGEMVEF---SSGVRG 83

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V I  +G   EI  GD+V   G     P      GRV +ALG PIDG   +
Sbjct: 84  MALNLETDNVGIVVLGNDREIQEGDIVKRTGAIVDVPIGMEMLGRVFDALGNPIDGHGPV 143

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            K +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 144 -KTNTRRRVELKAPGIIPRKSVHEPMQTGLKAVDCLVPIGRGQRELIIGDRQTGKTAIAI 202

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228
            T+++     D  DK      I   +G++   V   ++        K ++VV AT+ E+ 
Sbjct: 203 DTIINQKPNFDSGDKNKQLYCIYVAIGQKRSTVANLVKILTQAGAMKYTIVVAATASEAA 262

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +   I EYF   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 263 PLQYLAPYSGCAIGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 322

Query: 289 ELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E G   I     +L      + PI           + L+  L  +G
Sbjct: 323 LHSRLLERAAKLNAENGKWIINCPYQLLKHKLVMSQPIFQPTL-----FLSLS-QLFFKG 376

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K +   L   + ++ E   +     +   +D    + 
Sbjct: 377 FRPAINVGLSVSRVGSAAQIKAMKTVAGRLKLELAQYRE---VAAFAQFGSDLDAATQQL 433

Query: 407 VHQVPIIYDFLKQSP 421
           +++   + + LKQ  
Sbjct: 434 LNRGAQLTELLKQKQ 448


>gi|27461559|gb|AAM95196.1| ATPase F1 alpha subunit [Kingia australis]
          Length = 418

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|187925743|ref|YP_001897385.1| flagellar protein export ATPase FliI [Burkholderia phytofirmans
           PsJN]
 gi|187716937|gb|ACD18161.1| flagellar protein export ATPase FliI [Burkholderia phytofirmans
           PsJN]
          Length = 549

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 155/444 (34%), Positives = 238/444 (53%), Gaps = 18/444 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIR 64
           A  A +     +   G ++    +      L   + +G  V+ +     +L     +V+ 
Sbjct: 104 ALRARNAIAKPMRACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPQGSSLPMAEAEVVG 161

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPID 114
            + D +++ P      +  G  VF            G  R+       GRV++A G+P+D
Sbjct: 162 FSGDKLFLMPTTEVIGLLPGARVFPLESAPIADPMAGAKRLPVGWELLGRVLDASGRPLD 221

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   LG       + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 222 GLGPLGAH-ADAPLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGK 280

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           S LL   AR    + ++I L+GERGREV+EFI +    + L +SVV+ A +D SP+LR  
Sbjct: 281 SVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQ 340

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L
Sbjct: 341 AASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPAL 400

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D 
Sbjct: 401 VERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDI 460

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR        +          ++ R++  RD+  +G Y  G D +LD+A+   P +
Sbjct: 461 EASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRM 520

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL+Q   + ++ +   E+   L
Sbjct: 521 EAFLQQGFRECANFEPSLEMLDAL 544


>gi|34539175|gb|AAQ74471.1| F1-ATPase alpha subunit [Allium altaicum]
          Length = 417

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 171/407 (42%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK      T+L+    ++  +      +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNESSESETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V +F++  +  N  + S++V AT+ +   L+ +AP +   + EYF     + L+I 
Sbjct: 177 KRSTVAQFVQILIEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNSMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVRG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|237678820|emb|CAQ57547.1| RhcN protein [Bradyrhizobium elkanii]
          Length = 451

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 153/411 (37%), Positives = 228/411 (55%), Gaps = 8/411 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPV 75
           +     G I+           +     +G+  + Q   S      +VI +  D V + P+
Sbjct: 32  DTRAVRGRITRAIGTLL--HAVLPEARVGELCLLQDPRSGWSLEAEVIGLLPDGVLLTPI 89

Query: 76  GIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    +S    V   GR ++        GRVI++ G+P+DG   +  G++   +  K P 
Sbjct: 90  GDMVGLSNRAEVVTTGRMQVVSVGPDLLGRVIDSFGRPLDGKGPIKAGEVR-PLRGKAPN 148

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            M R+ +E+ F  G+RV+D       GQRIG++  +G GKSTL+S   +    D  I++L
Sbjct: 149 PMKRRGIEQSFPLGVRVLDGLLTCGEGQRIGIYGDAGCGKSTLMSQIVKGAAADVTIVAL 208

Query: 195 VGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           +GERGREVREFIE +LG+ L++SVVVV TSD S + R      A  +AEYF  +G  V+L
Sbjct: 209 IGERGREVREFIERHLGEALRRSVVVVETSDRSAMERAQCAHMATALAEYFRDQGLRVVL 268

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRF+ ++REI   +GE P  RG+P SVF+ LP LLER G  E   G+ITA  +VL
Sbjct: 269 MMDSLTRFSRAMREIGLAAGEPPTRRGFPPSVFALLPGLLERAGMGE--HGSITAFYTVL 326

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD   DPIA+  R ILDGHI+L+R+LA    +P +D L+S SR+ D   S   +K  S
Sbjct: 327 VEGDGTGDPIAEESRGILDGHIILSRALASREHFPAIDVLSSRSRVMDAIVSVQHRKAAS 386

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
               L+ R+ E   +  +G Y+ G D + D+A+  +  +  FL+Q   +  
Sbjct: 387 LFRDLLSRYAEAEFLIKVGEYKQGSDPLTDRAIASIEELRTFLRQGQDEAC 437


>gi|3273602|gb|AAC24783.1| F1-ATPase alpha subunit [Catopsis nutans]
          Length = 420

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 166/408 (40%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLYCVYVAIG 176

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 177 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSXAQLKAMKQVR 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 GSSKLELAQYRE---VAXFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|209696445|ref|YP_002264376.1| F0F1 ATP synthase subunit alpha [Aliivibrio salmonicida LFI1238]
 gi|226739839|sp|B6EHT9|ATPA_ALISL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|208010399|emb|CAQ80745.1| ATP synthase alpha subunit [Aliivibrio salmonicida LFI1238]
          Length = 513

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 101/456 (22%), Positives = 186/456 (40%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I S++     +  L+  V  G+ +   G +
Sbjct: 1   MQLNSTEISDLIKQRIEKFNVASEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGGH 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 60  ---YALALNLERDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-AKLTSPVEVIAPGVIDRKSVDQPLQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKNSGIFAIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSVAYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 QTELFTAGVRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 446


>gi|71022593|ref|XP_761526.1| hypothetical protein UM05379.1 [Ustilago maydis 521]
 gi|46101395|gb|EAK86628.1| hypothetical protein UM05379.1 [Ustilago maydis 521]
          Length = 437

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 97/382 (25%), Positives = 168/382 (43%), Gaps = 18/382 (4%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPI 113
           +S   G  + +  D V +   G    I  GD V   G+   +       GRV++ALG PI
Sbjct: 9   SSGVRGMALNLEADNVGVSIFGSDRLIREGDTVKRTGQIVDVPVGPKLLGRVVDALGNPI 68

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   +     + K P  + R+ V +  +TGI+ ID   P+  GQR  +      G
Sbjct: 69  DGKGPIEAAERRRASL-KAPGILPRKSVNQPMQTGIKPIDAMVPIGRGQRELIIGDRQTG 127

Query: 174 K-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVA 222
           K      T+L+    +D  D       +   VG++   V + ++    ++  K +++V A
Sbjct: 128 KTAVAIDTILNQKRWNDGQDESKKLYCVYVAVGQKRSTVAQLVKVLEENDAMKYTIIVAA 187

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ E+  L+ +AP +   I E+F   G + L+I D +++ A + R+++      P    Y
Sbjct: 188 TASEAAPLQYLAPFSGCAIGEWFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 247

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G++TA+  +   G + +  I  +V SI DG + L  
Sbjct: 248 PGDVFYLHSRLLERAAKMNDSYGGGSLTALPVIETQGGDVSAFIPTNVISITDGQVYLES 307

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A S   K +  SL   + ++ E   +     +   +D
Sbjct: 308 ELFFKGIRPAINVGLSVSRVGSAAQSKLYKSVSGSLKLSLAQYRE---LAAFAQFGSDLD 364

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
                 +++   + + LKQ   
Sbjct: 365 AATRATLNRGVRLVELLKQPQF 386


>gi|257454336|ref|ZP_05619599.1| ATP synthase F1, alpha subunit [Enhydrobacter aerosaccus SK60]
 gi|257448239|gb|EEV23219.1| ATP synthase F1, alpha subunit [Enhydrobacter aerosaccus SK60]
          Length = 514

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 185/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +   ++L         G I  ++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISNLIKQRIQDLTAGATAKNEGTIVMVSDGIVQIHGL-EDAMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G   +  GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGEYLNLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+ ++    P  ++RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKLTDKVEKIAPGVIDRQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++ A+     K +   VG++   +   +           + VVVA++ E   L+ 
Sbjct: 178 AMAIDAIIAQKHSGIKCVYVAVGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNAEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SSLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ+ 
Sbjct: 415 DDATRKQLDHGQRVTELMKQNQ 436


>gi|20146592|gb|AAM12450.1| ATP synthase alpha subunit [Manilkara zapota]
          Length = 399

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G  V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGXMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D  ++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDFSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERADKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +     +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNKGARLTE 399


>gi|315648135|ref|ZP_07901236.1| flagellar protein export ATPase FliI [Paenibacillus vortex V453]
 gi|315276781|gb|EFU40124.1| flagellar protein export ATPase FliI [Paenibacillus vortex V453]
          Length = 439

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 154/417 (36%), Positives = 241/417 (57%), Gaps = 9/417 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPVGI 77
           V   G ++ +  +   V        +GD        ++     +V+    + V + P+G 
Sbjct: 19  VRINGKVTQVIGLM--VESEGPDASIGDVCYIYPTKQSKPLKAEVVGFRDNKVLLMPLGE 76

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              I  G  V   G+   +   +   G+V++ LG+P+DG   +          +     +
Sbjct: 77  LHSIGPGCDVVGTGKPLSVQVGSELLGKVLDGLGQPLDGS-IIPARMPHYSTHNVPQNPL 135

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           NR RV++    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+L+G
Sbjct: 136 NRPRVQEPISIGVRAIDGLLSIGKGQRVGIFAGSGVGKSTLMGMIARNTSADVNVIALIG 195

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV +FI  D   + LK+SVV+VATSD+  ++R    L A TIAEYF  +G NV+L+
Sbjct: 196 ERGREVLDFIERDLGPEGLKRSVVIVATSDQPALIRIKGALIATTIAEYFRDRGLNVMLM 255

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G      G+ITA  +VLV
Sbjct: 256 MDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GSITAFYTVLV 313

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VR ILDGHIVLNR++A +G +P +D LAS+SR+       ++     +
Sbjct: 314 DGDDMNEPIADAVRGILDGHIVLNRNIANKGHFPAIDVLASISRVMKDISPEEQIDASEN 373

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +  L+  ++++ D+  IG Y+ G +  +D+++  +  I+DF KQ  ++ ++ +  QE
Sbjct: 374 VKRLMAVYKDSEDLINIGAYQEGSNADIDESIEYIGRIWDFTKQKVNEKTTLNEVQE 430


>gi|3273582|gb|AAC24773.1| F1-ATPase alpha subunit [Vellozia elegans]
          Length = 421

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIAXVYGLNE-IQAGEXVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G            GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVXAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P     P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGRGLSPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 XGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|189017696|gb|ACD71517.1| F1-ATPase alpha subunit [Burmannia stuebelii]
          Length = 393

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 93/394 (23%), Positives = 164/394 (41%), Gaps = 22/394 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 117 LIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVKILSEAN 176

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VA 353

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               +   +D      +++   + +  KQ   + 
Sbjct: 354 AFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 387


>gi|24379919|ref|NP_721874.1| F0F1 ATP synthase subunit alpha [Streptococcus mutans UA159]
 gi|2493021|sp|P95787|ATPA_STRMU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|24377899|gb|AAN59180.1|AE014985_4 FoF1 membrane-bound proton-translocating ATPase, alpha subunit
           [Streptococcus mutans UA159]
 gi|1773264|gb|AAD13381.1| ATPase, alpha subunit [Streptococcus mutans]
          Length = 501

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 176/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARACGLDNAMS-GELLEFDNG---TFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    + I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESSDIGIIILGDFNSIREGDTVKRTGKIMEVPVGQSLIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  + +  P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+++  
Sbjct: 122 -ETTATRPVEAAAPGVMQRQSVSEPLQTGIKAIDALVPIGRGQRELVIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAIINQKGQDMICIYVAIGQKESTVRSQVEVLRKYGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G + L++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHALIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKLSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDSATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQGLH 425


>gi|290580101|ref|YP_003484493.1| FoF1 membrane-bound proton-translocating ATPase subunit alpha
           [Streptococcus mutans NN2025]
 gi|254997000|dbj|BAH87601.1| FoF1 membrane-bound proton-translocating ATPase alpha subunit
           [Streptococcus mutans NN2025]
          Length = 501

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 176/428 (41%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q+    + +  E++  N  V + G ++ I         L   +  G+ +          G
Sbjct: 6   QEISALIKKQIENFQPNFDVTETGVVTYIGDGIARACGLDNAMS-GELLEFDNG---TFG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               +    + I  +G    I  GD V   G+   +       GRV+N LG+P+DG   +
Sbjct: 62  MAQNLESSDIGIIILGDFNSIREGDTVKRTGKIMEVPVGQSLIGRVVNPLGQPVDGLGEI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  + +  P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+++  
Sbjct: 122 -ETTATRPVEAAAPGVMQRQSVSEPLQTGIKAIDALVPIGRGQRELVIGDRQTGKTSIAI 180

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   VR  +E          ++VV A++ +   L  +AP 
Sbjct: 181 DAIINQKGQDMICIYVAIGQKESTVRSQVEVLRKYGALDYTIVVTASASQPSPLLYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
             V +AE F   G + L++ D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 241 AGVAMAEEFMYNGKHALIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  
Sbjct: 301 SAKLSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           +SVSR+   A     KK+  +L   +  + E         +   +D      +++     
Sbjct: 361 SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDSATQAKLNRGRRTV 417

Query: 415 DFLKQSPS 422
           + LKQ   
Sbjct: 418 EVLKQGLH 425


>gi|193890925|gb|ACF28622.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 405

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 94/403 (23%), Positives = 168/403 (41%), Gaps = 23/403 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V   G      G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFAGG---VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNSKATSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     D L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILSEADALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G++TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQQQ 395


>gi|34539411|gb|AAQ74589.1| F1-ATPase alpha subunit [Phytelephas aequatorialis]
          Length = 417

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/412 (22%), Positives = 167/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 404


>gi|289450330|ref|YP_003475406.1| ATP synthase F1 subunit alpha [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184877|gb|ADC91302.1| ATP synthase F1, alpha subunit [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 629

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 14/406 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  +      ++ LS     G+ V     NS   G ++ +  + +     G   EI
Sbjct: 131 EVGTVQEVGDGIAIISGLS-MAAYGEIVSF---NSGIKGMILDLRENQIGCVIFGDESEI 186

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G +V   G+   I     + GRV+NALG+P+D    +   D    I +  P  + RQ 
Sbjct: 187 TEGSIVKRTGKTAGIPVGEGFLGRVVNALGEPVDDAGDICAVDY-YPIENPAPGIIQRQP 245

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGER 198
           V +  +TG+  ID   P+  GQR  +      GK+ +      +        I   +G++
Sbjct: 246 VNRPMETGLLAIDSMFPIGCGQRELIIGDRQTGKTAIALDTILNQKGKDIVCIYVAIGQK 305

Query: 199 GREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + +E     D L  ++VV AT+ ES  L+ +AP +   + EYF  KG NVL++ D
Sbjct: 306 ASSVAQLVETLRQHDALSYTIVVNATAGESATLQYIAPYSGCALGEYFMHKGRNVLIVYD 365

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS--EKEKGNITAVISVLV 315
            +++ A + R ++      P    YP  VF    RLLER      E   G++TA+  V  
Sbjct: 366 DLSKHAIAYRTLSLLLERSPGREAYPGDVFYLHSRLLERSANLAPEYGGGSMTALPIVET 425

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  ++ SI DG I L   L   G+ P V+   SVSR+   A +   KK   +
Sbjct: 426 QAGDVSAYIPTNIISITDGQIFLESDLFHSGQRPAVNVGLSVSRVGGAAQTKAMKKAAGA 485

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +   + ++ E     +   +   +D    + +     +   L+Q+ 
Sbjct: 486 IRLDLAQYREME---VFMQFSSDLDETTKRQLRYGQGLMRLLRQNQ 528


>gi|6561656|gb|AAF17000.1|AF197668_1 ATPase alpha subunit [Hedyosmum arborescens]
          Length = 422

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 94/414 (22%), Positives = 171/414 (41%), Gaps = 24/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 4   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 59

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 60  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 118

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------------DCFDKV 190
           +  +TG++ +D   P+  GQR  +      GK+ +      +            D +   
Sbjct: 119 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDKYIYC 178

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G
Sbjct: 179 VYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNG 238

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ 
Sbjct: 239 MHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSS 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A   
Sbjct: 299 TALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLR 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K++  S    + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 359 AMKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 409


>gi|47551121|ref|NP_999743.1| mitochondrial ATP synthase alpha subunit precursor
           [Strongylocentrotus purpuratus]
 gi|1556441|emb|CAA69203.1| mitochondrial ATP synthase alpha subunit precursor
           [Strongylocentrotus purpuratus]
          Length = 551

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 100/422 (23%), Positives = 181/422 (42%), Gaps = 24/422 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + +   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGL-KNIQAEEMVEF---SSGLKGMALNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG   LG  +    + +K P  + R  
Sbjct: 125 KEGDVVKRSGAIVDVPVGESILGRVVDALGTPIDGKGPLG-TEHRARVGTKAPG-IPRIS 182

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V +  +TGI+ +D    +C GQR  +      GK+ +      +                
Sbjct: 183 VREPMQTGIKAVDSLVLICRGQRELIIGDRQTGKTAVAIDTIINQKRFNDEAEEKNKLYC 242

Query: 191 IISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D LK +++V AT+ ++  L+ +AP +   + E+F   G
Sbjct: 243 IYVAIGQKRSTVAQIVKRLHDSDALKYTIIVSATASDAAPLQYLAPYSGCAMGEFFRDNG 302

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER      +   G++
Sbjct: 303 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNPDFGGGSL 362

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 363 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIPPAINVGLSVSRVGSAAQVK 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLSS 426
             K++  S+   +  + E   +     +   +D      +++   + + LKQ   + ++ 
Sbjct: 423 AMKQVAGSMKLDLGEYRE---VAAFAQFGSDLDASTQNLLNRGVRLTELLKQGQYTPMAV 479

Query: 427 ED 428
           ED
Sbjct: 480 ED 481


>gi|290511664|ref|ZP_06551032.1| ATP synthase F1, alpha subunit [Klebsiella sp. 1_1_55]
 gi|289775454|gb|EFD83454.1| ATP synthase F1, alpha subunit [Klebsiella sp. 1_1_55]
          Length = 513

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L++    G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAE-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPL-ENDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|183984060|ref|YP_001852351.1| ATP synthase alpha chain AtpA [Mycobacterium marinum M]
 gi|226739916|sp|B2HQK4|ATPA_MYCMM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|183177386|gb|ACC42496.1| ATP synthase alpha chain AtpA [Mycobacterium marinum M]
          Length = 549

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 98/434 (22%), Positives = 174/434 (40%), Gaps = 23/434 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +    ++ +   +  G +         V  L   V   + +   G     LG  + 
Sbjct: 13  SAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGL-PSVMTQELLEFPGG---VLGVALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V    +G  E I  G  V   G    +     + GRVIN LG+PIDG   + + +
Sbjct: 69  LDEHSVGAVILGNFENIEEGQQVKRTGEVLSVPVGDAFLGRVINPLGQPIDGRGDI-EAE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  + RQ V++  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 128 TRRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +     +  D     + +   VG++G  +               + +V A + +S   + 
Sbjct: 188 NQRQNWETGDPKKQVRCVYVAVGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   +A+++   G +VL++ D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPYTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG   L   L  +G  P 
Sbjct: 308 LLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + ++ E         +   +D      + + 
Sbjct: 368 INVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELE---AFAAFASDLDATSKAQLDRG 424

Query: 411 PIIYDFLKQSPSDL 424
             + + LKQ     
Sbjct: 425 ARLVELLKQPQYQP 438


>gi|269962674|ref|ZP_06177019.1| ATP synthase subunit A [Vibrio harveyi 1DA3]
 gi|269832597|gb|EEZ86711.1| ATP synthase subunit A [Vibrio harveyi 1DA3]
          Length = 523

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 188/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 68

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 69  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 127 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 186 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYREL---AAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|255038377|ref|YP_003088998.1| ATP synthase F1, alpha subunit [Dyadobacter fermentans DSM 18053]
 gi|254951133|gb|ACT95833.1| ATP synthase F1, alpha subunit [Dyadobacter fermentans DSM 18053]
          Length = 525

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 167/442 (37%), Gaps = 36/442 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   S+  + + G +  +      +  LSQ V  G+ +V +          + +  D
Sbjct: 15  EQLAGARSEAELEEVGTVLQVGDGVARIYGLSQ-VQAGELLVFENG---LKALALNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +G   +I  G  V        +       GRV+N L +PIDG+  +      M 
Sbjct: 71  NVGAVLLGDFSDIKEGATVKRTKEIASVKVGDGIIGRVVNTLAEPIDGNGPIVGETFEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P  + RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      +   
Sbjct: 131 IERKAPGVIYRQPVTEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAVAIDTIINQRE 190

Query: 188 DK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     I    G++   ++              +V+V A + +   ++  AP T  
Sbjct: 191 FYEKGEPVFCIYVACGQKASTIKSIEATLRKYGAMDYTVIVAAGASDPSPMQFYAPFTGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A S RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALVIYDDLSKQAVSYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
                                 K  G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VIADDSIAANMNDLPPSLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +
Sbjct: 371 SNLFNSGIRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D     A+ +     + LKQ+ 
Sbjct: 428 DAATKLAIDRGRRNQEVLKQAQ 449


>gi|226360598|ref|YP_002778376.1| F0F1 ATP synthase subunit alpha [Rhodococcus opacus B4]
 gi|254808110|sp|C1AW01|ATPA_RHOOB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226239083|dbj|BAH49431.1| ATP synthase alpha chain [Rhodococcus opacus B4]
          Length = 547

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 106/448 (23%), Positives = 184/448 (41%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E+Y+ +   +      G ++  +     V+ L       + +   G     LG
Sbjct: 9   DEIRSAIENYTASYSPEASREEVGVVTDTSDGIAHVSGL-PSAMANELLEFPGG---ILG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G  E I  G  V   G    +     + GRVIN LG+PIDG   +
Sbjct: 65  VALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAFLGRVINPLGQPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              D +  +  +    + RQ VE+  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 125 -ASDETRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
             +L+  A  +  D+      I   +G++G  +               + +V A + +S 
Sbjct: 184 DAILNQKANWETGDEKQQVRCIYVAIGQKGSTIAGVKAALEEQGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIGQHWMYQGKHVLVVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERSAKLSDALGGGSLTALPIIETKANDVSAYIPTNVISITDGQVFLESDLFNKG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   + +F E         +   +D      
Sbjct: 364 VRPAINVGISVSRVGGAAQTKGMKKVSGSLRLELAQFRELE---AFSAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           + +   + + LKQ   S +  ED    I
Sbjct: 421 LERGARLVELLKQDQYSPIPVEDQIVSI 448


>gi|254251154|ref|ZP_04944472.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
 gi|124893763|gb|EAY67643.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
          Length = 515

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 152/441 (34%), Positives = 228/441 (51%), Gaps = 18/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A  +    +   G ++    +      L   + +G     +      L     +V+  + 
Sbjct: 72  ARSHRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSALPHAQAEVVGFSG 129

Query: 68  DIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDD 117
           D +++ P      +  G  V+            G  R+       GRV++A G+P+DG  
Sbjct: 130 DRLFLMPTTDVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDGLG 189

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + S     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 190 PL-ASKVDAPLSSPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 248

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 249 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 308

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 309 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 368

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 369 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 428

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 429 ISRAMTALIDDAHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 488

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +           L
Sbjct: 489 LQQGFRECAPFGSSLAALDAL 509


>gi|146329630|ref|YP_001210028.1| ATP synthase F1, alpha subunit [Dichelobacter nodosus VCS1703A]
 gi|190358171|sp|A5EXJ7|ATPA_DICNV RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146233100|gb|ABQ14078.1| ATP synthase F1, alpha subunit [Dichelobacter nodosus VCS1703A]
          Length = 513

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++   +D   +          G I +++     +  LSQ   LG+ +     N
Sbjct: 1   MQLNASEISSFIKDKIADYDNKVENKAEGTIVNVSDGIVQIQGLSQ-AMLGEMIELPNGN 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G  E +  GD V   GR   +       GRV++ALG PID
Sbjct: 60  ---FALAMNLERDSVGAVVLGAYEHLREGDKVHCTGRILEVPVGRGLLGRVVDALGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  +    P  + RQ V++  +TG++ ID   PL  GQR  +      GK
Sbjct: 117 GKGKID-AEGSSPVEKIAPGVIERQSVDQPLQTGLKAIDSMVPLGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +      D LK ++VV A++  S  ++
Sbjct: 176 TAIAIDAIINQKNTGVICIYVAIGQKASSIASVVRKLEEADALKHTIVVAASASTSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + E+F  +G++ L+I D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YIAPYSGCAMGEFFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINAKEVERLTAGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGLSVSRVGGAAQTQIIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + +KQ      S
Sbjct: 413 LDEATRKQLEHGQRVTELMKQKQYAPLS 440


>gi|269958420|ref|YP_003328207.1| F0F1 ATP synthase subunit alpha [Anaplasma centrale str. Israel]
 gi|269848249|gb|ACZ48893.1| F0F1 ATP synthase subunit alpha [Anaplasma centrale str. Israel]
          Length = 507

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 174/432 (40%), Gaps = 23/432 (5%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L  L +  E +   +     G + +I      V  L   V  G+ V     +S   G V 
Sbjct: 10  LRILKEKIEGFDNPVKASSVGDVVAIKDGIALVYGLG-GVKFGETVAF---SSGVRGVVA 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            +  D   +   G   EI  GD V   G     P+     GRV+N LG P+DG   +   
Sbjct: 66  GLERDTCSVVVFGEDREIREGDSVQCTGELMTVPAGLSVLGRVVNPLGLPVDGGGPIV-A 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D S+ + +K P  M RQ V +  +TGI+ +D+  P+  GQR  V      GK+ +     
Sbjct: 125 DCSLPVEAKAPGVMARQPVCEPLQTGIKTVDMLIPIGRGQRELVIGDRKTGKTAMALDAI 184

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            +                I   +G++   +   +           ++VV A + +   ++
Sbjct: 185 INQKRTNDLADAKNRVYCIYVAIGQKNSSIARVVHKLKETGAMDYTIVVAAGASDPASIQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 245 YIAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHS 304

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  +G  P
Sbjct: 305 RLLERAAKLSDDLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLESELFHKGFRP 364

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+  S+   + ++ E  D    G     +D      + +
Sbjct: 365 AINVGLSVSRVGSAAQVKAVKKVAGSMKLTLAQYRELEDFARFG---SDLDPSSQAMLEK 421

Query: 410 VPIIYDFLKQSP 421
                + LKQ  
Sbjct: 422 GRRFMELLKQGQ 433


>gi|164685600|gb|ABY66746.1| atp1 [Althaea officinalis]
          Length = 413

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SLKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|330953278|gb|EGH53538.1| type III secretion component [Pseudomonas syringae Cit 7]
          Length = 442

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 152/420 (36%), Positives = 225/420 (53%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + SI  V    +     V +G+  + +  G   +   +VI  + D   + P+G  E +
Sbjct: 26  GTLRSIRGVLLRASVAG--VRIGELCMLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQ 139
           S    +   G+   +       GRVI+ +G+ +DG   +   G     + ++ P   +RQ
Sbjct: 84  STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPVVASGLQRYPLHAEPPAPFSRQ 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K    G+R ID    L  GQR+G+F   G+GKS+LL+   R+   D ++I L+GERG
Sbjct: 144 RIVKPLSLGVRAIDSLLTLAQGQRMGIFGEPGVGKSSLLASIVRNSNVDVIVIGLIGERG 203

Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVRE +E         ++V VVATSD     R  A   A T AEY   +G +VLL++DS
Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTQAEYHRDQGRSVLLLMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+    GE P  RGYP S FS LPRLLER GP     G+ITA+ +VL +GD
Sbjct: 264 LTRFARAQRELGLAVGEPPTRRGYPPSFFSALPRLLERAGP--GPSGSITALYTVLTEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
              DP+A+  RSILDGHIVL+  LA+   +P +D L S SRL D   + + ++L S +  
Sbjct: 322 ASMDPVAEETRSILDGHIVLSADLAQRDHFPAIDVLRSRSRLMDHIATTEHRQLASRMRE 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LI R EE   +  +G Y  G D + D+A+ +   I  FL+Q  ++    D  +    +++
Sbjct: 382 LIARREEIELLIQVGEYAAGSDPLADEAIARHADIEAFLRQPATE---HDSLELTLMQMR 438


>gi|152972643|ref|YP_001337789.1| F0F1 ATP synthase subunit alpha [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238897241|ref|YP_002921989.1| F0F1 ATP synthase subunit alpha [Klebsiella pneumoniae NTUH-K2044]
 gi|262040361|ref|ZP_06013607.1| F-ATPase subunit alpha [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330005179|ref|ZP_08305141.1| ATP synthase F1, alpha subunit [Klebsiella sp. MS 92-3]
 gi|166201669|sp|A6TG38|ATPA_KLEP7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|150957492|gb|ABR79522.1| ATP synthase subunit A [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238549571|dbj|BAH65922.1| ATP synthase subunit A [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042302|gb|EEW43327.1| F-ATPase subunit alpha [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328536385|gb|EGF62744.1| ATP synthase F1, alpha subunit [Klebsiella sp. MS 92-3]
          Length = 513

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L++    G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAE-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPL-ENDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|164685586|gb|ABY66739.1| atp1 [Dipsacus fullonum]
 gi|164685648|gb|ABY66770.1| atp1 [Symphoricarpos orbiculatus]
          Length = 413

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKIMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|163803599|ref|ZP_02197465.1| F0F1 ATP synthase subunit alpha [Vibrio sp. AND4]
 gi|159172593|gb|EDP57451.1| F0F1 ATP synthase subunit alpha [Vibrio sp. AND4]
          Length = 513

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 189/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGIRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|76574801|gb|ABA47275.1| HrcN [Pseudomonas cichorii]
          Length = 451

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 154/448 (34%), Positives = 239/448 (53%), Gaps = 17/448 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGK 54
           M   +  L    +++S+ L     V   G I+ ++ +            +GD   + +  
Sbjct: 1   MNSTMTPLDTWRQEHSERLQRCAPVEVMGRIAGVSGILL--HSHMPQARIGDLCEIRRAD 58

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
            ++ + +++  +     +  +G  + I++G  V        +       G V++  G+ +
Sbjct: 59  GTEVMAEIVGFDRKHTLLAALGALDGIAIGAPVRPLFQPHSLVVGEYLLGSVLDGFGRSL 118

Query: 114 DGDDS----LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
            GD      L     +  ++   PPA  R R+E    TG+R ID    L  GQR+G+FAG
Sbjct: 119 SGDGPSAFALSGAAGAQPVIRDAPPATERPRIEAPLSTGLRAIDGLLTLGEGQRVGLFAG 178

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESP 228
           +G GK+TLL+  AR+   + ++  L+GERGRE+REF+  +   +   ++V+V +TSD S 
Sbjct: 179 AGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRSRTVLVCSTSDRSS 238

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A  TA TIAE F  +G + LLI+DS+TRFA + REI   SGE     G P SV+S
Sbjct: 239 MERARAAFTATTIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGEPAGRGGLPPSVYS 298

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRL+ER G +    G ITA+ SVL++ D+ NDP+AD VRS+LDGHIVL+R LAE G Y
Sbjct: 299 LLPRLVERAGRTRT--GAITALYSVLIEQDSMNDPVADEVRSLLDGHIVLSRRLAERGHY 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P VD L S+SR        ++ K  + +  L+  +++   +  +G Y+ G D + D AV 
Sbjct: 357 PAVDILTSLSRTMSNVVGTEQVKGATQIRRLLAAYQQVEMLIKLGEYQQGNDPLTDFAVQ 416

Query: 409 QVPIIYDFLKQSPSD-LSSEDVFQEITK 435
               I DFL+QS  D +S ED    + +
Sbjct: 417 SRDQIMDFLQQSLRDPVSLEDTLDHLIQ 444


>gi|206580919|ref|YP_002241285.1| ATP synthase F1, alpha subunit [Klebsiella pneumoniae 342]
 gi|288937924|ref|YP_003441983.1| ATP synthase F1 subunit alpha [Klebsiella variicola At-22]
 gi|226739898|sp|B5XZM2|ATPA_KLEP3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|206569977|gb|ACI11753.1| ATP synthase F1, alpha subunit [Klebsiella pneumoniae 342]
 gi|288892633|gb|ADC60951.1| ATP synthase F1, alpha subunit [Klebsiella variicola At-22]
          Length = 513

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L++    G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAE-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPL-ENDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|308068655|ref|YP_003870260.1| flagellum-specific ATP synthase [Paenibacillus polymyxa E681]
 gi|305857934|gb|ADM69722.1| Flagellum-specific ATP synthase [Paenibacillus polymyxa E681]
          Length = 439

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 156/422 (36%), Positives = 245/422 (58%), Gaps = 9/422 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYI 72
              + V   G ++ +  +   V        +GD   ++ GK +  L  +V+    + V +
Sbjct: 14  RQLDPVRVNGKVTQVIGLM--VESEGPDASIGDVCYIYPGKTAKPLQAEVVGFRDNKVLL 71

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P+G  + I  G  V   G+   +   +   G+V++ LG+P+DG   +          + 
Sbjct: 72  MPLGELQSIGPGCDVVGTGKPLNVQVGSELLGKVLDGLGQPLDGS-LIPSRMARYSTFNI 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               +NR RV++    G+R ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +
Sbjct: 131 PSNPLNRPRVQEPISIGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMIARNTEADVNV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREV +FI  D   + L++SVV+VATSD+  ++R    L A TIAEYF  +G 
Sbjct: 191 IALIGERGREVLDFIERDLGPEGLERSVVIVATSDQPALIRIKGALIATTIAEYFRDRGL 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NV+L++DS+TR+A + RE+    GE P  RGY  SVF+ LP+LLER G      G+ITA 
Sbjct: 251 NVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GSITAF 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A +G +P +D LAS+SR+       D+ 
Sbjct: 309 YTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANKGHFPAIDVLASISRVMKDIAPRDQI 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
               ++  L+  ++++ D+  IG Y+ G +  +D+++ ++  I+DF +Q   + +  D  
Sbjct: 369 DAAENIKRLMAVYKDSEDLINIGAYQQGSNAEIDESMERIRDIWDFTRQRTDEKAELDEV 428

Query: 431 QE 432
           +E
Sbjct: 429 RE 430


>gi|210617051|ref|ZP_03291386.1| hypothetical protein CLONEX_03608 [Clostridium nexile DSM 1787]
 gi|210149574|gb|EEA80583.1| hypothetical protein CLONEX_03608 [Clostridium nexile DSM 1787]
          Length = 501

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 15/420 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L    E+Y       + G +  I+    TV  +  +   G+ V+ +       G V  I 
Sbjct: 13  LKSEIENYELETKDQEVGTVIWISDGITTVYGI-DHAMYGEIVIFETG---VKGMVQDIR 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + + +  +G    I  G  V   G+   I     + GRV++ALG PIDG   +   D  
Sbjct: 69  RNEIGVILLGKDTGIKEGTKVTRTGKKAGIPVGDAYLGRVVDALGAPIDGKGDI-PSDGY 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I  + P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++ +    + 
Sbjct: 128 RPIEQEAPGIIDRKSVSVPLETGILAIDSMFPIGRGQRELIIGDRQTGKTSIATDTIINQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   + + +      D +  S+VV AT+ +S  L+ +AP +   +A
Sbjct: 188 KGKDVICIYVAIGQKASTIAKIVSTLTKNDAMDYSIVVSATASDSAPLQYIAPYSGTALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER      
Sbjct: 248 EYFMHKGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVSR+
Sbjct: 308 ELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFAGMRPAVNVGLSVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK+  S+   + +F E     +   +   +D    + +     + + LKQ 
Sbjct: 368 GGAAQTKAMKKVAGSIRIDLAQFREME---VFTQFSSDLDAATKEQLQYGKGLMELLKQP 424


>gi|34539169|gb|AAQ74468.1| F1-ATPase alpha subunit [Akebia quinata]
          Length = 417

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVXIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGPSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|62318461|dbj|BAD94435.1| alpha subunit of F1F0-ATP synthase [Acidithiobacillus ferrooxidans]
          Length = 514

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 181/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   +++L                 G I S++     +  L + V  G+ +   G   
Sbjct: 3   QLNPSEISELIRARIAGFEGRVETRSQGTIISLSDGILRIHGL-EDVMYGEMLELPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  GD+V   GR  ++  +    GRV+NAL +PIDG
Sbjct: 60  -RFGLALNLEQDNVGAVVLGEFSGLQEGDVVKCTGRVMQVPIAKALLGRVVNALAQPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +  + +    P  ++RQ V++  +TGI+ ID   P+  GQ+         GK+
Sbjct: 119 KGAIDAEEFDV-LEKIAPGIIDRQSVDEPMQTGIKSIDAMVPIGRGQQTSFIGDRQTGKT 177

Query: 176 TLLSMFARSDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +    +V      +G++   V   +           + V+ A + ES  ++ 
Sbjct: 178 AVAVDAILNQKGKEVQRSYVAIGQKASTVAGVVRKLEEYGAMEYTTVIAANASESAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G N L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGMNALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                     G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADFVEKFTKGEVKGNTGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   S SR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNAGIRPAINAGLSGSRVGGAAQTKIIKKLGGGIRLDLAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D I  K + +   + +F+KQ      S
Sbjct: 415 DEITRKRIERGKRVTEFVKQDQFSPMS 441


>gi|20146594|gb|AAM12451.1| ATP synthase alpha subunit [Marcgravia sp. Anderberg s.n.]
          Length = 399

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 165/406 (40%), Gaps = 23/406 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V          G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEEGIARVYGLNE-IQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            K++  S    + ++ E      +  +   +D      ++    + 
Sbjct: 356 MKQVCGSSKLELAQYREW---AALAQFGSDLDAATQALLNTGARLT 398


>gi|37522474|ref|NP_925851.1| F0F1 ATP synthase subunit alpha [Gloeobacter violaceus PCC 7421]
 gi|81708063|sp|Q7NCS3|ATPA_GLOVI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|35213475|dbj|BAC90846.1| ATP synthase alpha chain [Gloeobacter violaceus PCC 7421]
          Length = 513

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 102/438 (23%), Positives = 177/438 (40%), Gaps = 25/438 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    + Y+  L V   G +  +      V  L +     + +  +      +G  + 
Sbjct: 11  SVIRDQIQKYNTELQVTNVGTVLQVGDGIARVYGLEK-CMASELLEFEDG---TIGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   GR   I     + GRV+NAL  PIDG   +   +
Sbjct: 67  LEEDNVGAVLMGAGRTIEEGSTVRATGRIASIPVGPAFLGRVVNALAIPIDGKGDIVGSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
             + + S  P  + R+ V +   TGI  ID   P+  GQR  +      GK+T+   ++ 
Sbjct: 127 TRL-LESPAPGIIKRKSVYEPLATGITAIDAMIPIGRGQRELIIGDRQTGKTTIAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +E        + +++V A ++E   L+ +AP T  T
Sbjct: 186 NQKGKGVVCVYVAIGQKASTVAQIVEVLRSRGALEYTIIVAANANEPAALQYLAPYTGCT 245

Query: 241 IAEYFSSKG----------DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + EY    G          +  LL+ D +++ A + R+++      P    YP  VF   
Sbjct: 246 LGEYVMYNGLTLPGSDKKINAALLVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 305

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +  +G++TA+  +     + +  I  +V SI DG I L+  L   G  
Sbjct: 306 SRLLERAAKLSPDLGEGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLDSGLFNSGLR 365

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D   SVSR+   A +   KK+   L   + +F E         +   +D      + 
Sbjct: 366 PAIDAGISVSRVGGAAQTKAMKKVAGKLRLDLAQFSELE---AFSQFASDLDKATQAQLA 422

Query: 409 QVPIIYDFLKQSPSDLSS 426
           +   + + LKQ      S
Sbjct: 423 RGLRLREILKQPQYSPLS 440


>gi|259908761|ref|YP_002649117.1| flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|224964383|emb|CAX55892.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|283478737|emb|CAY74653.1| flagellum-specific ATP synthase [Erwinia pyrifoliae DSM 12163]
          Length = 453

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 158/436 (36%), Positives = 236/436 (54%), Gaps = 17/436 (3%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-- 62
           L++L Q         V + G +   T +    T L   + LG   V + +++  +G+V  
Sbjct: 12  LDSLEQRIGQLPD--VRRYGRLIRATGLVLEATGL--QLPLGATCVIERQDNMGIGEVES 67

Query: 63  --IRINLDIVYICPVGIGEEISLGDLVFHW-------GRFRISPSACWCGRVINALGKPI 113
             +  N   + + P+   E I  G  V+            ++       GRV++  G+P+
Sbjct: 68  EVVGFNGQKLLLMPLEEVEGIVPGARVYARLSGDSQHSAKQLMLGPELLGRVLDGSGRPL 127

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG  +   G     +++     + R  + +   TG+R I+    +  GQR+G+FAGSG+G
Sbjct: 128 DGLPAPETG-YRAPLITPPFNPLQRTPITEVLDTGVRAINALLTVGRGQRMGLFAGSGVG 186

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           KS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++VV+ A +D SP+LR 
Sbjct: 187 KSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVIAAPADVSPLLRM 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
                A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP 
Sbjct: 247 QGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPA 306

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D
Sbjct: 307 LVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAID 366

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+            V     L+  ++  RD+  +G Y  G D  LDKA+   P 
Sbjct: 367 IEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTDPTLDKAIKLYPE 426

Query: 413 IYDFLKQSPSDLSSED 428
           +  FL+Q   + S+ D
Sbjct: 427 LEAFLQQGMFERSTFD 442


>gi|157144369|ref|YP_001451687.1| F0F1 ATP synthase subunit alpha [Citrobacter koseri ATCC BAA-895]
 gi|166201659|sp|A8ACN8|ATPA_CITK8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157081574|gb|ABV11252.1| hypothetical protein CKO_00073 [Citrobacter koseri ATCC BAA-895]
          Length = 513

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +         + ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALQNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNVEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|34539211|gb|AAQ74489.1| F1-ATPase alpha subunit [Barbaceniopsis sp. Weigend et Weigend
           2000-318]
          Length = 387

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 92/387 (23%), Positives = 163/387 (42%), Gaps = 20/387 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL- 214
            +      GK+ +      +               +   +G++   V + ++     N  
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSKGTSETLYCVYVAIGQKRSTVAQLVQILSEANAL 183

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++    
Sbjct: 184 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 243

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI 
Sbjct: 244 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 303

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +   
Sbjct: 304 DGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAF 360

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             +   +D      +++   + +  KQ
Sbjct: 361 AQFGSDLDAATQALLNRGARLTEVPKQ 387


>gi|16760916|ref|NP_456533.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29141392|ref|NP_804734.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213053041|ref|ZP_03345919.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213425002|ref|ZP_03357752.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213612434|ref|ZP_03370260.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646784|ref|ZP_03376837.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855157|ref|ZP_03383397.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289829464|ref|ZP_06547076.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25290438|pir||AE0752 flagellum-specific ATP synthase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503213|emb|CAD05720.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137019|gb|AAO68583.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 456

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 236/428 (55%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + ++     +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 83  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLE-TGA 141

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E   +TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 142 LITPPFNPLQRTPIEHVLETGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRA 201

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 202 DVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 261

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 262 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      +
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALIT 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 382 EQHYARVRLFKQLLSSFQRNRDLISVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERAD 441

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 442 WEDSLQAL 449


>gi|17548614|ref|NP_521954.1| flagellum-specific ATP synthase [Ralstonia solanacearum GMI1000]
 gi|17430862|emb|CAD17544.1| probable flagellum-specific atp synthase protein [Ralstonia
           solanacearum GMI1000]
          Length = 481

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 154/431 (35%), Positives = 227/431 (52%), Gaps = 23/431 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           VV  G ++ +  +      L   V     V         L +V+    +  ++ P     
Sbjct: 41  VVTCGKLTRVAGLVMEAVGLKLPVGSACRVELP-YGRHVLAEVVGFAEERAFLMPQTDLV 99

Query: 80  EISLGDLVFHWGRFRIS---------------PSACWCGRVINALGKPIDGDDSLGK-GD 123
            +  G  VF      +                      GRV++A G+P+DG   LG   +
Sbjct: 100 GVVPGARVFPLEPQHLPLDTADPTIAHSKFLPVGPRLLGRVVDANGEPLDGKGPLGASEE 159

Query: 124 LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           L+   ++  P   + R+ +E+    G+R I+    +  GQR+G+FAGSG+GKS LL M A
Sbjct: 160 LAWGSLAPAPLNPLKRKPIERVLDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMA 219

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ L+GERGREV+EFI++ LGD  L +S VV A +D SP++R      A TI
Sbjct: 220 RYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADNSPLMRLQGAAYAHTI 279

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G   
Sbjct: 280 AEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAGNGM 339

Query: 302 ----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAE+G YP +D   S+
Sbjct: 340 VDAAGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSI 399

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+       ++         L  R++  RD+  +G Y  G D + D+A+ + P +  FL
Sbjct: 400 SRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGAYARGSDPVTDQAIARYPSMEGFL 459

Query: 418 KQSPSDLSSED 428
           +Q   +  S +
Sbjct: 460 QQGMFENESRE 470


>gi|167770215|ref|ZP_02442268.1| hypothetical protein ANACOL_01558 [Anaerotruncus colihominis DSM
           17241]
 gi|167667537|gb|EDS11667.1| hypothetical protein ANACOL_01558 [Anaerotruncus colihominis DSM
           17241]
          Length = 434

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 160/425 (37%), Positives = 240/425 (56%), Gaps = 9/425 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVG 76
           +L    G +  I  +    T ++    +GD    Q   N+  L + + +  + V + P  
Sbjct: 15  DLYAHYGKVEKIVGMMVEATGVTCN--IGDVCNIQIDANNSILAEAVGLKGNSVQLMPYQ 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               I  G +V   G    +  S    GR ++A+G PIDG  +   G+ S  I       
Sbjct: 73  DVTGIGFGSVVIPTGQSLTLRMSDELIGRTVDAMGNPIDGGPAFQSGE-SYSINGTYSNP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M+R  +    + GI+ ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+LV
Sbjct: 132 MDRPPITDVIEIGIKAIDGLLTIGKGQRMGIFAGSGVGKSTLMGMIARNIKADVNVIALV 191

Query: 196 GERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV EFI  D   + +K+SV+VVATSD   ++R    LTA  IAEYF  +G +VLL
Sbjct: 192 GERGREVVEFINRDLGPEGVKRSVLVVATSDTPAMMRSKCALTATAIAEYFRDQGKDVLL 251

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRF  + REI  + GE PVARGY  S++S LP+LLER G  E   G+IT + +VL
Sbjct: 252 MMDSLTRFCMAQREIGLSVGEPPVARGYTPSIYSALPKLLERSGNFE--HGSITGIYTVL 309

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+ N+PI+D+VR I+DGHIVL+R +A +  YP +D LAS+SRL     + +      
Sbjct: 310 VEGDDTNEPISDTVRGIVDGHIVLSRKVAMKNHYPAIDVLASISRLMAGIATPEHNFAAG 369

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQEI 433
            L  ++  ++E +D+  IG Y+ G +  LD+A+  +  I   L+Q+    +   D  Q +
Sbjct: 370 RLRAMLSIYQENQDLISIGAYKGGSNPELDEAMRHIDQINKLLQQAVDVKVDFNDTIQMM 429

Query: 434 TKKLQ 438
              ++
Sbjct: 430 LDIIK 434


>gi|57868880|gb|AAW57436.1| ATP synthase alpha subunit [Cornus sericea]
          Length = 398

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 166/406 (40%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 398


>gi|255730951|ref|XP_002550400.1| ATP synthase alpha chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240132357|gb|EER31915.1| ATP synthase alpha chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 447

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/375 (24%), Positives = 162/375 (43%), Gaps = 18/375 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G    +  G+ V   G+   +       GRV++ LG  IDG   +
Sbjct: 1   MALNLEADQVGVVLFGSDRLVKEGETVKRTGQIVSVPVGPELLGRVVDGLGNAIDGKGPI 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  KAAAYSRA-QVKAPGILPRRSVHEPMQTGLKSVDALVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
             +L+    ++  D       +   VG++   V + ++     D LK SV+V AT+ E+ 
Sbjct: 120 DAILNQKRWNNGTDEKKKLYCVYVAVGQKRSTVAQLVQTLEQNDALKYSVIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP TA  I E+F   G + L++ D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYIAPFTACAIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER        G  ++TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKMSDAYGAGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLKQSP 421
           +++   +   LKQ  
Sbjct: 357 LNRGERLTQLLKQKQ 371


>gi|311696572|gb|ADP99445.1| ATP synthase F1, alpha subunit [marine bacterium HP15]
          Length = 514

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 104/447 (23%), Positives = 191/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ + +   + L         G I S++     +  L+  V  G+ +       
Sbjct: 3   QLNPSEISDIIKKRIEKLDISSEAKNEGTILSVSDGIVLIHGLAD-VMYGEMIEFANG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  E+++ G  V   GR   +       GRV++ALG PIDG
Sbjct: 60  -TFGMALNLERDSVGAVVLGDYEDLAEGQKVRCTGRILEVPVGPELMGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG  DL+  +    P  + RQ V++  +TG++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGDLG-TDLTSPVEKVAPGVIARQSVDEPVQTGLKAIDTMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++  + D   K I   VG++   +   +           ++VV A + +   ++ 
Sbjct: 178 AVAIDAIINQKDTGIKCIYVAVGQKQSSIAAVVRKLEEHGAMDHTIVVAAGAADPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  ++ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGTSMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNADYVEQLTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A +   KKL  ++   + ++ E         +   +
Sbjct: 358 TNLFNSGIRPAMNAGISVSRVGGSAQTKIMKKLGGNIRLALAQYREL---AAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +     + + +KQ+     S
Sbjct: 415 DEATRQQLEHGQRVTELMKQNQYSPMS 441


>gi|116513799|ref|YP_812705.1| F0F1 ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275431|sp|Q04BA5|ATPA_LACDB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|116093114|gb|ABJ58267.1| ATP synthase F1 subcomplex alpha subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
          Length = 503

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +   + +          G    
Sbjct: 10  SLIKQQLEHYDDKLDIEEVGVVTYVGDGIARAHGLNNVLS-SELLQFDNG---AYGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGKFDDIREGDRVKRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+   + ++ 
Sbjct: 125 KTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP + + 
Sbjct: 185 NQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVEAGPSEPAPMLYIAPYSGIA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +  +  + +  I  +V SI DG I L   +   G  P +D  ASVS
Sbjct: 305 SKELGGGSLTALPVIQTEAGDISAYIPTNVISITDGQIFLQSDMFFSGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG---SDLDQATQAKLARGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|91785614|ref|YP_560820.1| ATPase FliI/YscN [Burkholderia xenovorans LB400]
 gi|91689568|gb|ABE32768.1| ATPase FliI/YscN [Burkholderia xenovorans LB400]
          Length = 552

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 155/444 (34%), Positives = 239/444 (53%), Gaps = 18/444 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIR 64
           A  A +     +   G ++    +      L   + +G  V+ +     +L     +V+ 
Sbjct: 107 ALRARNAIARPMRACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPQGSSLPMAEAEVVG 164

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPID 114
            + D +++ P      +  G  VF            G  R+       GRV++A G+P+D
Sbjct: 165 FSGDKLFLMPTTEVMGLLPGARVFPLESAPIADPMAGAKRLPVGWELLGRVLDASGRPLD 224

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   LG       + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 225 GLGPLGAH-ADAPLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGK 283

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           S LL   AR    + ++I L+GERGREV+EFI +    + L +SVV+ A +D SP+LR  
Sbjct: 284 SVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQ 343

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L
Sbjct: 344 AASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPAL 403

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D 
Sbjct: 404 VERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDI 463

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR        +  +       ++ R++  RD+  +G Y  G D +LD+A+   P +
Sbjct: 464 EASISRAMTALIDDNHLEKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRM 523

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL+Q   + ++ +   E+   L
Sbjct: 524 EAFLQQGFRECANFEPSLEMLDAL 547


>gi|268593516|ref|ZP_06127737.1| ATP synthase F1, alpha subunit [Providencia rettgeri DSM 1131]
 gi|291310939|gb|EFE51392.1| ATP synthase F1, alpha subunit [Providencia rettgeri DSM 1131]
          Length = 513

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFDVVSEAHNEGTIVSVNDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPVD-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   V   +         + ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTVSNVVRKLEEHGALQNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|291562024|emb|CBL40839.1| type III secretion system ATPase, FliI/YscN [butyrate-producing
           bacterium SS3/4]
          Length = 433

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 165/442 (37%), Positives = 254/442 (57%), Gaps = 17/442 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDN 58
           M +NL  L Q AE        + G I ++  +    +       +GD V+   + +N   
Sbjct: 1   MYENLLKLIQQAETAD-----RIGKIENVVGMSMEASG--GRSGIGDIVMIYNEAENCQV 53

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
             +V+      + +        I+ G  V + G R +I       GR+INALG PID   
Sbjct: 54  PAEVVGFKNGKIQLMTYENISGITAGSFVRNTGCRLQIPVGDFLKGRIINALGHPIDEKG 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
               G L   + S     +NR  + +  + GI+ ID    +  GQR+G+FAGSG+GKSTL
Sbjct: 114 EFPPGKL-YTVDSAYINPLNRPPIREHLEFGIKAIDGLNTIGKGQRMGIFAGSGVGKSTL 172

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPL 236
           + M AR+   D  +I+LVGERGREV EF++ D   + +K+SV++VATSD+  +LR   PL
Sbjct: 173 MGMIARNVKTDINVIALVGERGREVLEFVKKDLGEEGMKRSVLIVATSDQPAMLRMKCPL 232

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A TIAEYF  +G +VLL++DS+TR+A + REI    GE P+ARGY  S+++E PRLLER
Sbjct: 233 VATTIAEYFRDQGADVLLMMDSLTRYAMAQREIGLAIGEPPIARGYTPSIYAEFPRLLER 292

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   K  G+IT + +VLV+GD+ N+P+AD+VR ILDGHIVL+R LA    +P +D  AS
Sbjct: 293 SGNFAK--GSITGIYTVLVEGDDTNEPVADTVRGILDGHIVLSRQLANANHFPAIDISAS 350

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL +     + +K  S   +++  +++  D+  IG Y+ G +  LD+AV ++  +  F
Sbjct: 351 ISRLMNDIAGEEHRKAASRFRNMLSLYQKNADLISIGAYKKGANSALDEAVDRIGDMNKF 410

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L+Q  ++      ++E  ++++
Sbjct: 411 LEQETNENI---PYEESIRRME 429


>gi|156972758|ref|YP_001443665.1| F0F1 ATP synthase subunit alpha [Vibrio harveyi ATCC BAA-1116]
 gi|156524352|gb|ABU69438.1| hypothetical protein VIBHAR_00423 [Vibrio harveyi ATCC BAA-1116]
          Length = 523

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 187/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 68

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G    +  G  V   GR   +       GRV+N LG+PID
Sbjct: 69  --RYALALNLERDSVGAVVMGPYANLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 127 GKGPI-EAKLTSPVEVIAPGVIARKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 186 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|146313760|ref|YP_001178834.1| F0F1 ATP synthase subunit alpha [Enterobacter sp. 638]
 gi|166990357|sp|A4WGF3|ATPA_ENT38 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145320636|gb|ABP62783.1| ATP synthase F1, alpha subunit [Enterobacter sp. 638]
          Length = 513

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFSVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVD-NDGFSPIEVIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|34539243|gb|AAQ74505.1| F1-ATPase alpha subunit [Canna indica]
          Length = 416

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSKGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|164685582|gb|ABY66737.1| atp1 [Echinocystis lobata]
          Length = 413

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++    G+ L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSSGNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|34539241|gb|AAQ74504.1| F1-ATPase alpha subunit [Campynema lineare]
          Length = 416

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 165/408 (40%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVXDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRASESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|300721116|ref|YP_003710384.1| membrane-bound ATP synthase, F1 sector subunit alpha [Xenorhabdus
           nematophila ATCC 19061]
 gi|297627601|emb|CBJ88120.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVNDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    +    P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGAV-EHDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTISNVVRKLEEHGALENTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|310767341|gb|ADP12291.1| flagellum-specific ATP synthase [Erwinia sp. Ejp617]
          Length = 453

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 159/438 (36%), Positives = 237/438 (54%), Gaps = 21/438 (4%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-- 62
           L++L Q         V + G +   T +    T L   + LG   V + +++  +G+V  
Sbjct: 12  LDSLEQRIGQLPD--VRRYGRLIRATGLVLEATGL--QLPLGATCVIERQDNMGIGEVES 67

Query: 63  --IRINLDIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGK 111
             +  N   + + P+   E I  G  V+            +  + P     GRV++  G+
Sbjct: 68  EVVGFNGQKLLLMPLEEVEGIVPGARVYARVSGDSQHSAKQLMLGP--ELLGRVLDGSGR 125

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG  +   G     +++     + R  + +   TG+R I+    +  GQR+G+FAGSG
Sbjct: 126 PLDGLPAPETG-YRAPLITPPFNPLQRTPITEVLDTGVRAINALLTVGRGQRMGLFAGSG 184

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           +GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   ++VV+ A +D SP+L
Sbjct: 185 VGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVIAAPADVSPLL 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++L
Sbjct: 245 RMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 304

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP 
Sbjct: 305 PALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPA 364

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR+            V     L+  ++  RD+  +G Y  G D  LDKA+   
Sbjct: 365 IDIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTDPTLDKAIKLY 424

Query: 411 PIIYDFLKQSPSDLSSED 428
           P +  FL+Q   + S+ D
Sbjct: 425 PELEAFLQQGMFERSTFD 442


>gi|164685680|gb|ABY66786.1| atp1 [Melianthus major]
          Length = 413

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SLKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|83814474|ref|YP_445049.1| ATP synthase F1, alpha subunit [Salinibacter ruber DSM 13855]
 gi|294506923|ref|YP_003570981.1| ATP synthase alpha chain [Salinibacter ruber M8]
 gi|124007209|sp|Q2S432|ATPA_SALRD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|83755868|gb|ABC43981.1| ATP synthase F1, alpha subunit [Salinibacter ruber DSM 13855]
 gi|294343251|emb|CBH24029.1| ATP synthase alpha chain [Salinibacter ruber M8]
          Length = 551

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 103/455 (22%), Positives = 178/455 (39%), Gaps = 45/455 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ L      AE+Y      + G +        T+  LS      + V       D  G
Sbjct: 15  LRRELGDFETEAEEY------EAGTVLEAGDGIATLYGLS-NAQASELVEFP--EQDVEG 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V +   G  + +S GD     GR   +  +    GRVI+ LG+P+DG   +
Sbjct: 66  MVLNLEEDNVGVILFGDVDAVSEGDEARRTGRIASVGVNENMLGRVIDPLGRPLDGKGPI 125

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 + +  K P  + R+ VE+  +TGI+ ID   P+  GQR  V      GK+ +L+
Sbjct: 126 EGEKTVLPLERKAPGVIYREPVEEPLQTGIKAIDSMIPVGRGQRELVIGDRQTGKTAVLT 185

Query: 180 MFARSDCF-----------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
               +                 +   VG++   V +   D   +   + +V+V A++   
Sbjct: 186 DTIINQKKTHQEGTDSGDPVYCVYVAVGQKDSTVAQVQRDLERNGALEHTVIVNASASMP 245

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP     I EYF   G + L+  D +++ A + RE++      P    YP  +F
Sbjct: 246 TPLQYVAPFAGACIGEYFRDTGRDSLVCFDDLSKQAVAYRELSLLLRRPPGREAYPGDIF 305

Query: 288 SELPRLLERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADS 327
               RLLER      +                     G++TA+  +     + +  I  +
Sbjct: 306 YLHSRLLERAAKIISDEEVATQMNGLPDALQDKVQGGGSLTALPVIETQAGDVSAYIPTN 365

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           V SI DG I L   L   G  P +D   SVSR+   A     K + S+L   + ++ E  
Sbjct: 366 VISITDGQIYLETDLFNSGIRPAIDVGNSVSRVGGSAQIDAMKDVASTLRIDLSQYRELE 425

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                  +   +D    + +++   + + L Q   
Sbjct: 426 ---AFAKFGSDLDPSTQQQLNRGERLVEILNQDQF 457


>gi|125975089|ref|YP_001038999.1| ATP synthase F1, alpha subunit [Clostridium thermocellum ATCC
           27405]
 gi|158513256|sp|A3DIM7|ATPA_CLOTH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|125715314|gb|ABN53806.1| ATP synthase F1 subcomplex alpha subunit [Clostridium thermocellum
           ATCC 27405]
          Length = 506

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 176/423 (41%), Gaps = 16/423 (3%)

Query: 6   ETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y +K+ V   GY+         V  L+  +  G+ +  +       G  + 
Sbjct: 10  AIIKQQIDKYGNKSHVDDVGYVLQAGDGIARVYGLNNCMS-GELLEFENG---VFGMAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D +         ++  G LV   G+   +       GRVI+ LG P+DG   + + +
Sbjct: 66  LEEDNIGCVLFRGERDVKEGTLVKRTGKTVEVPVGKALIGRVIDPLGNPLDGKGEI-ETE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRPIEYPAPSVMDRKPVNRPLQTGIMAIDAMVPIGRGQRELIIGDRQTGKTAIAVDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V E I           +VVV +T+ E P L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKASSVAEVINTLEEGGAMEYTVVVSSTASEMPTLQYIAPYAGCS 244

Query: 241 IAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           IAE F      +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 245 IAEEFMYNDHKDVLIVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAQ 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SV
Sbjct: 305 LSDELGGGSITALPIIETQVGDVSAYIPTNVISITDGQIYLETELFYSGQRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  +L   + ++ E   + +   +   +D +    + Q   + + L
Sbjct: 365 SRVGGAAQIKAMKKVAGALRINLAQYRE---LAVFAQFGSDLDKVTKDKLIQGERLVESL 421

Query: 418 KQS 420
           KQS
Sbjct: 422 KQS 424


>gi|312130333|ref|YP_003997673.1| ATP synthase f1 subcomplex alpha subunit [Leadbetterella byssophila
           DSM 17132]
 gi|311906879|gb|ADQ17320.1| ATP synthase F1 subcomplex alpha subunit [Leadbetterella byssophila
           DSM 17132]
          Length = 529

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 99/445 (22%), Positives = 166/445 (37%), Gaps = 36/445 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QLA   ++  + + G +  I      +  LS+ V  G+ +  +       G  + +  D
Sbjct: 17  EQLAGARTEAELEEVGTVLQIGDGVARIYGLSK-VQQGELISFENG---LKGLALNLEED 72

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G   EI  G      G    +       GRV+N L +PIDG+  +      M 
Sbjct: 73  NVGVVLLGDSSEIKEGATAKRTGAIATVKVGDGIIGRVVNTLAEPIDGNGPISGETFDMP 132

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TGI+ +D   P+  GQR  V      GK+ +      +   
Sbjct: 133 LERKAPGVIYRQPVTEPLQTGIKAVDAMIPIGRGQRELVIGDRQTGKTAVCIDTIINQKE 192

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     I    G++   V+   +          + +V A + +   ++  AP T  
Sbjct: 193 FYDKGEPVYCIYVACGQKASTVKAVEQTLRKYGAMAYTTIVAANASDPSPMQYFAPFTGA 252

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 253 AIGEYFRDTGRPALVVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 312

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             +                      G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 313 INESDAIAKEMNDLPPSLKDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 372

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +
Sbjct: 373 SNLFNAGIRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDL 429

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDL 424
           D      + +     + LKQ     
Sbjct: 430 DAATKLVIERGKRNQEILKQGQYQP 454


>gi|298504521|gb|ADI83244.1| flagellum-specific ATPase FliI [Geobacter sulfurreducens KN400]
          Length = 441

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 233/423 (55%), Gaps = 11/423 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +   G ++ +  +   +        +G    VH         +V+    +   + P+G  
Sbjct: 19  IRFHGKVTQVVGLV--IEGFCPDAAVGTLCLVHPNDGDPIPAEVVGFRDNKTLLMPLGEL 76

Query: 79  EEISLGDL--VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
             + LG L  V    +  +       GRVI+ LG PID    L   +    I +     M
Sbjct: 77  RGVGLGSLISVKR-KKASLGVGPGLLGRVIDGLGVPIDDKGPLAIRE-EYPIYANPVNPM 134

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+G
Sbjct: 135 KRRPIRQPLDLGIRAINALLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIG 194

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REFI +D   + LKKSVVVVATSD+ P++R      A TIAEYF ++G  VLL+
Sbjct: 195 ERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLM 254

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G      G+IT + +VLV
Sbjct: 255 MDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTG--SFLDGSITGLYTVLV 312

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+PI+D++RSILDGHIVLNR LA    YPP+D LAS SR+ +      +++  S 
Sbjct: 313 EGDDFNEPISDAMRSILDGHIVLNRELAARAIYPPLDILASASRVMNDVTERSQQQFASR 372

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
              L+  + +  D+  IG Y+PG +  +D A+ ++  + +F++Q   D +S E    E+ 
Sbjct: 373 FKELLAAYRQAEDLINIGAYKPGSNPTIDYAIAKMDGMVNFIRQGIHDGVSMEQSIAELA 432

Query: 435 KKL 437
              
Sbjct: 433 DIF 435


>gi|240169506|ref|ZP_04748165.1| F0F1 ATP synthase subunit alpha [Mycobacterium kansasii ATCC 12478]
          Length = 553

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 96/434 (22%), Positives = 173/434 (39%), Gaps = 23/434 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +    ++ +   +  G +         V  L   V   + +   G     LG  + 
Sbjct: 13  SAIEEYVGSFTSDTAREEVGTVVDAGDGIAHVEGL-PSVMTQELLEFPGG---VLGVALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V    +G  E I  G  V   G    +     + GRV+N LG+PIDG   +   +
Sbjct: 69  LDEHSVGAVILGDFENIEEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPIDGRGDID-AE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  + RQ V++  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 128 TRRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTIL 187

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +     +  D+      +   +G++G  +               + +V A + +S   + 
Sbjct: 188 NQRENWESGDEKKQVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   IA+++   G +VL++ D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPYTGSAIAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++T +  +    ++ +  I  +V SI DG   L   L  +G  P 
Sbjct: 308 LLERCAKLSDDLGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + ++ E         +   +D      + + 
Sbjct: 368 INVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELE---AFAAFASDLDATSKAQLDRG 424

Query: 411 PIIYDFLKQSPSDL 424
             + + LKQ     
Sbjct: 425 ARLVELLKQPQYQP 438


>gi|104773793|ref|YP_618773.1| F0F1 ATP synthase subunit alpha [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|118573479|sp|Q1GAW7|ATPA_LACDA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|103422874|emb|CAI97536.1| H+ transporting ATPase / ATP synthase, alpha subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 503

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 178/424 (41%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L + + G ++ +         L+  +   + +          G    
Sbjct: 10  SLIKQQLEHYDDKLDIEEVGVVTYVGDGIARAHGLNNVLS-SELLQFDNG---AYGIAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG   + K D
Sbjct: 66  LESNDVGIIILGKFDDIREGDRVKRTGRIMEVPVGDALIGRVVNPLGQPVDGLGEI-KTD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  V      GK+   + ++ 
Sbjct: 125 KTRPIESKAPGVMQRQSVNQPLQTGIKAIDALVPIGRGQRELVIGDRKTGKTSLAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            +       I   +G++   VR  +E       +  ++VV A   E   +  +AP + + 
Sbjct: 185 NQKGQDVICIYVSIGQKESTVRAQVETLKKLGAMDYTIVVEAGPSEPAPMLYIAPYSGIA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 245 MGEEFMYAGKDVLVVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G++TA+  +  +  + +  I  +V SI DG I L   +   G  P +D  ASVS
Sbjct: 305 SKELGGGSLTALPVIQTEAGDISAYIPTNVISITDGQIFLQSDMFFSGTRPAIDAGASVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+  +L   +  + E       G     +D      + +     + LK
Sbjct: 365 RVGGAAQIPAMKKVAGTLRTDLASYRELESFAQFG---SDLDQATQAKLARGRRTVEVLK 421

Query: 419 QSPS 422
           Q   
Sbjct: 422 QPLH 425


>gi|34539313|gb|AAQ74540.1| F1-ATPase alpha subunit [Hechtia texensis]
          Length = 416

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 165/408 (40%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ   +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSXHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLSCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|186701980|ref|ZP_02554410.2| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|186700746|gb|EDU19028.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 799

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 106/420 (25%), Positives = 181/420 (43%), Gaps = 14/420 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+ +   K L ++ G + S+      V  L   V L + V  +       G  + +  D
Sbjct: 15  SQIKKFSEKALTLEVGNVISLGDGIVLVDGL-DNVMLNEIVRFENG---VEGMALNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    I  GD V+   R   +       GRV++ALGK +D   ++     S+ 
Sbjct: 71  AVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDALGKAVDNKGNIVANKFSV- 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+T+      +   
Sbjct: 130 IEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAIDAIINQKG 189

Query: 188 --DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEY 244
                +   +G++   +   + +         + VV A + E P L+ +AP T VTIAE 
Sbjct: 190 RNVNCVYVAIGQKNSTIANVVRELEAHGAMEYTTVVTANASELPALQYIAPFTGVTIAEE 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           +  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER    + E 
Sbjct: 250 WMHQGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERACKLKDEL 309

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA+  +     + +  I  +V SI DG I +  SL   G+ P +D   SVSR+  
Sbjct: 310 GAGSITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAGQRPAIDAGQSVSRVGS 369

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     K+  +SL   +  + E         +   +D    + +     +   +KQ+P+
Sbjct: 370 AAQIKSVKQTGASLKLELANYRELE---AFSQFGSDLDDETKRILKLGKAVMAVIKQAPN 426


>gi|57868912|gb|AAW57452.1| ATP synthase alpha subunit [Symplocos zizyphoides]
          Length = 397

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 167/405 (41%), Gaps = 23/405 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  D V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           ++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 QVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 397


>gi|6625701|gb|AAF19360.1|AF188265_6 The ATP synthase subunit alpha [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 181/443 (40%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELVKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                     G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|88606923|ref|YP_505839.1| F0F1 ATP synthase subunit alpha [Anaplasma phagocytophilum HZ]
 gi|115312235|sp|Q2GIG2|ATPA_ANAPZ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|88597986|gb|ABD43456.1| ATP synthase F1, alpha subunit [Anaplasma phagocytophilum HZ]
          Length = 506

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 176/440 (40%), Gaps = 23/440 (5%)

Query: 5   LETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L+ L +  E++   +     G + S+      V  L      G+ V      S   G + 
Sbjct: 10  LKILRERIENFGGPVKAGSVGEVLSVKDGIAVVYGL-HGAGFGETVAFA---SGVRGVIS 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  DI  +   G   E+  GD V   G   ++       GRV++ LG P+DG+ ++   
Sbjct: 66  GLESDIASVVIFGEDREVKEGDSVECTGELMKVPVGFSLLGRVVSPLGMPLDGEGAISGC 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  K P  M RQ V +  +TGI+ ID+  P+  GQR  +      GK+ +     
Sbjct: 126 DGENPVEVKAPGIMARQPVSEPLQTGIKTIDMLIPIGRGQRELIIGDRKTGKTAIALDTI 185

Query: 183 RSDC-----------FDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230
            +                 I   +G++   +   +           ++VV   + +S  L
Sbjct: 186 INQKRYNDRAASEKDKVYCIYVAIGQKNSSIARVVSKLCEAGAADYTIVVATGASDSVPL 245

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP  A  + E+F   G + L++ D +++ A + R+++      P    YP  VF   
Sbjct: 246 QYLAPYAACAMGEFFRDNGMHCLIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIH 305

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER          G++TA+  +     + +  I  +V SI DG I L   L  +G  
Sbjct: 306 SRLLERAAKLSDALGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFHKGFR 365

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A     KK+  S+   + ++ E  D    G     +D      + 
Sbjct: 366 PAINVGLSVSRVGSAAQVKAVKKVAGSMKLSLAQYRELEDFARFG---SDLDASSQAMLE 422

Query: 409 QVPIIYDFLKQSPSDLSSED 428
           +   + + LKQ      S +
Sbjct: 423 KGRRMIELLKQGQYSPLSVE 442


>gi|312882259|ref|ZP_07742005.1| F0F1 ATP synthase subunit alpha [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370103|gb|EFP97609.1| F0F1 ATP synthase subunit alpha [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 102/456 (22%), Positives = 188/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    ++  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-AAKMTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEDYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|39546127|gb|AAR28047.1| ATP synthase alpha subunit [Lilium lancifolium]
          Length = 391

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/399 (23%), Positives = 164/399 (41%), Gaps = 23/399 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTNIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAILGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSDSERLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFVAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
             SL   + ++ E   +     +   +D      +++  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGA 391


>gi|57868910|gb|AAW57451.1| ATP synthase alpha subunit [Schima sp. JS-2005]
          Length = 398

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 167/406 (41%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 398


>gi|13357689|ref|NP_077963.1| ATP synthase subunit A [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761987|ref|YP_001752215.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920229|ref|ZP_02931602.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508767|ref|ZP_02689916.2| ATP synthase F1, alpha subunit homolog [Ureaplasma parvum serovar
           14 str. ATCC 33697]
 gi|81624433|sp|Q9PR12|ATPA_UREPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358202|sp|B1AIC1|ATPA_UREP2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|11356743|pir||C82929 ATP synthase alpha chain UU132 [imported] - Ureaplasma urealyticum
 gi|6899091|gb|AAF30538.1|AE002114_5 ATP synthase alpha chain [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827564|gb|ACA32826.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902623|gb|EDT48912.1| ATP synthase F1, alpha subunit [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182675704|gb|EDT87609.1| ATP synthase F1, alpha subunit homolog [Ureaplasma parvum serovar
           14 str. ATCC 33697]
          Length = 799

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 106/420 (25%), Positives = 181/420 (43%), Gaps = 14/420 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+ +   K L ++ G + S+      V  L   V L + V  +       G  + +  D
Sbjct: 15  SQIKKFSEKALTLEVGNVISLGDGIVLVDGL-DNVMLNEIVRFENG---VEGMALNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    I  GD V+   R   +       GRV++ALGK +D   ++     S+ 
Sbjct: 71  AVGVVLLGDYSNIKEGDRVYRTKRIVEVPVGDVMLGRVVDALGKAVDNKGNIVANKFSV- 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+T+      +   
Sbjct: 130 IEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAIDAIINQKG 189

Query: 188 --DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEY 244
                +   +G++   +   + +         + VV A + E P L+ +AP T VTIAE 
Sbjct: 190 RNVNCVYVAIGQKNSTIANVVRELEAHGAMEYTTVVTANASELPALQYIAPFTGVTIAEE 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           +  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER    + E 
Sbjct: 250 WMHQGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERACKLKDEL 309

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA+  +     + +  I  +V SI DG I +  SL   G+ P +D   SVSR+  
Sbjct: 310 GAGSITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAGQRPAIDAGQSVSRVGS 369

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     K+  +SL   +  + E         +   +D    + +     +   +KQ+P+
Sbjct: 370 AAQIKSVKQTGASLKLELANYRELE---AFSQFGSDLDDETKRILKLGKAVMAVIKQAPN 426


>gi|127514772|ref|YP_001095969.1| F0F1 ATP synthase subunit alpha [Shewanella loihica PV-4]
 gi|190358199|sp|A3QJR2|ATPA_SHELP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|126640067|gb|ABO25710.1| ATP synthase F1, alpha subunit [Shewanella loihica PV-4]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRVHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGQKVKTTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPID-NDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           +VVVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTVVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|169303166|gb|ACA53180.1| ATP synthase alpha subunit [Callithamnion collabens]
          Length = 404

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 96/404 (23%), Positives = 166/404 (41%), Gaps = 12/404 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  +      V  L + V  G+ +    ++   +G  + +  D V +  +G G 
Sbjct: 7   VNNVGTVLQVGDGIARVYGLDE-VMAGELLQFDDQDQ-TIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L + ID   +    D  + I S  P  + R
Sbjct: 65  NILEGSSVQSTGKIAQIPVGQEFLGRVVNPLAQAIDAKGTPNPSDTRL-IESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF   G   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYTGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNADLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
             L   + +F E         +   +D      + +   + + L
Sbjct: 364 GKLKLELAQFAELE---AFSQFASDLDKATQNQLARGQRLREIL 404


>gi|309704182|emb|CBJ03529.1| ATP synthase alpha subunit [Escherichia coli ETEC H10407]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVTIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|118603007|ref|YP_904222.1| ATP synthase F1, alpha subunit [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|158512583|sp|A1AXU4|ATPA_RUTMC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118567946|gb|ABL02751.1| ATP synthase F1 subcomplex alpha subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 104/448 (23%), Positives = 191/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +       V   G + S++     +  L+  V  G+ +      
Sbjct: 1   MQLNAHEISDLIKKQIEGFDFDAEVRTEGSVVSVSDGIVRIHGLAD-VQFGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G  + +  + V    +G    IS GD+V    R   +       GRV+N LGK ID
Sbjct: 58  -NTFGMALNLEQNSVGAVILGDYLHISEGDVVKCTNRLVEVPVGEAMLGRVVNPLGKAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G D +     +  +    P  +NR+ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKDDID-VQGARPLEIMAPGVINRKSVDQPIQTGIKAIDAMVPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D   + +   +G++   V   +         + +++V A +  +P L+
Sbjct: 176 TAVAIDTIINQKDSGIRCVYVAIGQKDSSVAAVVRKLEEYGALENTIIVTAGAASAPALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+AEYF  +G++ L++ D +T+ A + RE++      P    YP  VF    
Sbjct: 236 YIAPYAGCTMAEYFRDRGEDALIVYDDLTKQAWAYREVSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKMTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAINAGLSVSRVGGSAQTNIIKKLGGGIRLDLAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      + +   + + +KQ+     S
Sbjct: 413 LDSETKAQIDRGQRVTELMKQNQYSPLS 440


>gi|296105472|ref|YP_003615618.1| F0F1 ATP synthase subunit alpha [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059931|gb|ADF64669.1| F0F1 ATP synthase subunit alpha [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295095361|emb|CBK84451.1| proton translocating ATP synthase, F1 alpha subunit [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|6561674|gb|AAF17018.1|AF197686_1 ATPase alpha subunit [Peumus boldus]
          Length = 418

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 170/416 (40%), Gaps = 23/416 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           ++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   +  S
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEPLS 408


>gi|297581988|ref|ZP_06943908.1| F0F1 ATP synthase subunit alpha [Vibrio cholerae RC385]
 gi|297533855|gb|EFH72696.1| F0F1 ATP synthase subunit alpha [Vibrio cholerae RC385]
          Length = 523

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 67

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 68  -NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G   L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 127 GKGPIG-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 186 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|313683644|ref|YP_004061382.1| ATPase, flii/yscn family [Sulfuricurvum kujiense DSM 16994]
 gi|313156504|gb|ADR35182.1| ATPase, FliI/YscN family [Sulfuricurvum kujiense DSM 16994]
          Length = 434

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 161/425 (37%), Positives = 233/425 (54%), Gaps = 10/425 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGD--FVVHQGKNSDNLGQVIRINLDIVYIC 73
           S+ L    G +S I+        L  +V +GD   +V +   ++ LG V  +  +  +I 
Sbjct: 12  SEKLTTVFGTVSKISPTVIVAEGL--HVSIGDTVLMVSETSGAEALGMVSEVERNRFFIT 69

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P    E    GD V+       I       GRV++    PIDG   +        I+   
Sbjct: 70  PFRFVEGFRAGDKVYPNQSGMMIEVGEALLGRVVDPFMNPIDGKGPIAGSHFE-SIIKAP 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
             AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       ++
Sbjct: 129 IAAMKRGMIDEPFSVGVKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGADAPIKVV 188

Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           +L+GERGREV EFIE  LG NL+ +V+VVATSD+SP++RK    +A+++AEYF  KG +V
Sbjct: 189 ALIGERGREVPEFIEKSLGGNLENTVLVVATSDDSPLMRKYGAFSAMSVAEYFKGKGQDV 248

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L ++DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E   G+ITA  +
Sbjct: 249 LFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAGKEEG-SGSITAFFT 307

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP+  L S SR+ +   + +    
Sbjct: 308 VLVEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPIHILNSASRVMNDIITPEHLAA 367

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           V     L    +E   +  IG Y  G D  LD+A+ +   +  FL Q    +S    +QE
Sbjct: 368 VRRFRRLYTLLKENEMLIRIGAYVRGTDRELDEAISKKEKMEAFLSQEAMSISG---YQE 424

Query: 433 ITKKL 437
              +L
Sbjct: 425 SIDQL 429


>gi|261341609|ref|ZP_05969467.1| hypothetical protein ENTCAN_08072 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315961|gb|EFC54899.1| ATP synthase F1, alpha subunit [Enterobacter cancerogenus ATCC
           35316]
          Length = 513

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSPIEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|197302624|ref|ZP_03167678.1| hypothetical protein RUMLAC_01353 [Ruminococcus lactaris ATCC
           29176]
 gi|197298206|gb|EDY32752.1| hypothetical protein RUMLAC_01353 [Ruminococcus lactaris ATCC
           29176]
          Length = 505

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 20/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ +E    L++D       + G + ++     T+  +  +   G+ V  +       G
Sbjct: 16  LKEEIENFDTLSKD------SEVGTVVAVGDGIATIYGI-DHAMYGEIVTFETG---LKG 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V  I  + +     G    I  G  V   G+   +     + GRV+NALG+PIDG   +
Sbjct: 66  MVQDIRKNEIGCILFGSDTGIREGTKVARTGKKAGVPVGDAYVGRVVNALGEPIDGKGEI 125

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    I ++ P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++  
Sbjct: 126 ASDDYR-PIENEAPGIVDRKSVSVPMETGILSIDAMFPIGRGQRELIIGDRQTGKTSIAL 184

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        +   +G++   V + +           +++V +T+ +   L+ +AP 
Sbjct: 185 DTILNQKGKDVICVYVAIGQKASTVAKVVNTLQTHGAMDYTIIVSSTASDCAPLQYIAPY 244

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  KG + L+I D +++ A + R ++   G  P    YP  VF    RLLER
Sbjct: 245 AGTAMAEYFMHKGKDALIIYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLER 304

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+  
Sbjct: 305 SSRLSEELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESGLFASGMRPAVNVG 364

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK   S+   + ++ E     +   +   +D    + +     + 
Sbjct: 365 LSVSRVGGAAQTKAMKKASGSIRIDLAQYREME---VFTQFSSDLDAATKEQLEYGSGLM 421

Query: 415 DFLKQSPSDLSS 426
           + LKQ      S
Sbjct: 422 ELLKQPLYHPLS 433


>gi|34539279|gb|AAQ74523.1| F1-ATPase alpha subunit [Dioscorea retusa]
          Length = 417

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSQSETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|39995521|ref|NP_951472.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA]
 gi|39982284|gb|AAR33745.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA]
          Length = 441

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 233/423 (55%), Gaps = 11/423 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +   G ++ +  +   +        +G    VH         +V+    +   + P+G  
Sbjct: 19  IRFHGKVTQVVGLV--IEGFCPDAAVGTLCLVHPNDGDPIPAEVVGFRDNKTLLMPLGEL 76

Query: 79  EEISLGDL--VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
             + LG L  V    +  +       GRVI+ LG PID    L   +    I +     M
Sbjct: 77  RGVGLGSLISVKR-KKASLGVGPGLLGRVIDGLGVPIDDKGPLAIRE-EYPIYANPVNPM 134

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+G
Sbjct: 135 KRRPIRQPLDLGIRAINALLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIG 194

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REFI +D   + LKKSVVVVATSD+ P++R      A TIAEYF ++G  VLL+
Sbjct: 195 ERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLM 254

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G      G+IT + +VLV
Sbjct: 255 MDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTG--SFLDGSITGLYTVLV 312

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+PI+D++RSILDGHIVLNR LA    YPP+D LAS SR+ +      +++  S 
Sbjct: 313 EGDDFNEPISDAMRSILDGHIVLNRELAARAIYPPLDILASASRVMNDVTERSQQQFASR 372

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
              L+  + +  D+  IG Y+PG +  +D A+ ++  + +F++Q   D +S E    E+ 
Sbjct: 373 FKELLAAYRQAEDLINIGAYKPGSNPTIDYAIAKMDGMINFIRQGIHDGVSMEQSIAELA 432

Query: 435 KKL 437
              
Sbjct: 433 DIF 435


>gi|152998459|ref|YP_001343294.1| ATP synthase F1 subunit alpha [Marinomonas sp. MWYL1]
 gi|190358156|sp|A6W3T0|ATPA2_MARMS RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|150839383|gb|ABR73359.1| ATP synthase F1, alpha subunit [Marinomonas sp. MWYL1]
          Length = 514

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 109/447 (24%), Positives = 190/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   +NL V       G I S+      +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKKRIENLDVSSDAQNEGTIVSVADGIVLIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V    +G  +++  G  V   GR    P      GRV++ALG PIDG
Sbjct: 60  -VYGIALNLERDSVGAVVLGKYQDLVEGQKVKCTGRILEVPIGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++    L+ ++    P  + RQ V++  +TG + ID   P+  GQR  +     IGK+
Sbjct: 119 KGAIN-AKLTDKVEKVAPGVIERQSVDQPIQTGYKAIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            L   ++ A+ D   K +   +G++   +   +           + VV A + +   +  
Sbjct: 178 ALAIDTIIAQKDSGIKCVYVAIGQKQSTIANVVRKLEEAGAMEYTTVVAAGASDPAAMLY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  T+ EYF  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYTGCTMGEYFRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNVDYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            S    G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSSFNAGIRPAMNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 415 DEATRKQLEHGKQVTELMKQKQFSPMS 441


>gi|34539317|gb|AAQ74542.1| F1-ATPase alpha subunit [Heliconia rostrata]
          Length = 415

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|167755040|ref|ZP_02427167.1| hypothetical protein CLORAM_00544 [Clostridium ramosum DSM 1402]
 gi|167705090|gb|EDS19669.1| hypothetical protein CLORAM_00544 [Clostridium ramosum DSM 1402]
          Length = 510

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 102/437 (23%), Positives = 184/437 (42%), Gaps = 19/437 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             + ++ L ++  K+      +   G + ++      +  L     LG+ +       D 
Sbjct: 7   RPDEISALIKEQIKHFDDVIELKDVGTVMTVGDGVSLIHGL-DNAMLGELLAFPN---DV 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G V+ ++ D V    +G    I  GD V   G+   I       GRV+N LG+ IDG+ 
Sbjct: 63  YGMVMNLDEDCVGAVLLGSESTIKEGDEVKRTGKIMEIPVGDEMLGRVVNPLGQAIDGNG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +     +  I       M R+ V++  +TGI  ID   P+  GQR  +      GK+ +
Sbjct: 123 EIITA-HTRPIERVASGVMTRKSVDQPLQTGITSIDAIIPIGRGQRELIIGDRQTGKTAI 181

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMA 234
              ++  + D     +   +G++   V + +E    G  ++ + VV A++ E   ++ +A
Sbjct: 182 AIDTILNQKDQDIYCVYVAIGQKNSTVAQIVEKLRKGGAMEYTTVVSASASELAPVQYIA 241

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     IAE +  +G +VL++ D +++ A + R ++      P    YP  VF    RLL
Sbjct: 242 PYAGCAIAEEWLDQGKDVLIVYDDLSKHAVAYRTVSLLLKRPPGREAYPGDVFYLHSRLL 301

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +E   G+ITA+  +     + +  I  +V SI DG I L + L   G  P +D
Sbjct: 302 ERACRLNEENGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLQQELFNAGFRPAID 361

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++  SL   + ++ E +       +   +D      +     
Sbjct: 362 TGLSVSRVGSAAQIKAMKQVSGSLKLELAQYAEMQ---AFAQFGSDLDAATKATLDHGAK 418

Query: 413 IYDFLKQSPSDLSSEDV 429
           + + LKQ+     +   
Sbjct: 419 VREVLKQAQYSPRTVST 435


>gi|57115595|gb|AAW33104.1| F1-ATPase alpha subunit [Plantago sempervirens]
          Length = 386

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 95/394 (24%), Positives = 164/394 (41%), Gaps = 23/394 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  +LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKALLGRVVDGLGLPIDGKGALGAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKTLNSRATSESERLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              VG++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAVGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            K++  SL   + ++ E   +     +   +D  
Sbjct: 356 MKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 386


>gi|325109015|ref|YP_004270083.1| type III secretion system ATPase, FliI/YscN [Planctomyces
           brasiliensis DSM 5305]
 gi|324969283|gb|ADY60061.1| type III secretion system ATPase, FliI/YscN [Planctomyces
           brasiliensis DSM 5305]
          Length = 442

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 166/440 (37%), Positives = 244/440 (55%), Gaps = 10/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNL 59
           M      L +  E          G +S +  +   V  L+    LG     + G+     
Sbjct: 1   MSTATSALLRQIESIVP--YGMTGQVSRVVGMTAHVRGLA--APLGAVCRIEAGQRQGID 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
            +VI +  D + + P G    I  GD V       RI       GRVINA G+ IDGD  
Sbjct: 57  AEVIGLEDDEIILQPYGELAGIKRGDTVRLVHSAQRIRVGDRLLGRVINARGEFIDGDLP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + S+ + +     + R R+ +  +TG+R ID       GQR+G+FAGSG+GKSTLL
Sbjct: 117 PVLPE-SLMLQNAPIAPLQRPRITERLETGVRAIDSLLTCGQGQRLGIFAGSGVGKSTLL 175

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
              AR    D  ++ LVGERGREVREF+  D   +  ++SV+VVATS+ES +LR+     
Sbjct: 176 GQLARYASADVNVVVLVGERGREVREFLERDLGEEGRRRSVLVVATSEESALLRRQCANV 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AEYF  +G NVLL++DS+TR+A + REI   +GE P  RGYP SVF+ LPRLLER 
Sbjct: 236 GTAVAEYFRDQGKNVLLMMDSVTRYALAQREIGLAAGEPPATRGYPPSVFALLPRLLERS 295

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G +E  +G+IT + +VLV+GD+ N+PIAD+VR ILDGHIVL+R LA +  +P +D L S+
Sbjct: 296 GRTE--RGSITGLYTVLVEGDDTNEPIADTVRGILDGHIVLSRDLAHKAHWPAIDILGSI 353

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRL ++            L  L+  + ++ D+  IG Y+ G + ++D+A+   P I +FL
Sbjct: 354 SRLMNELADETHLAAARQLKQLMAAYRQSEDLINIGAYQHGSNRVVDRAIQLKPRIDEFL 413

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q+ +  +       + ++L
Sbjct: 414 QQTSTSHTPLPETIRLLQQL 433


>gi|283787577|ref|YP_003367442.1| ATP synthase subunit alpha [Citrobacter rodentium ICC168]
 gi|282951031|emb|CBG90709.1| ATP synthase alpha subunit [Citrobacter rodentium ICC168]
          Length = 513

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|163850256|ref|YP_001638299.1| flagellum-specific ATP synthase [Methylobacterium extorquens PA1]
 gi|254559506|ref|YP_003066601.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
 gi|163661861|gb|ABY29228.1| flagellar protein export ATPase FliI [Methylobacterium extorquens
           PA1]
 gi|254266784|emb|CAX22583.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4]
          Length = 451

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 174/413 (42%), Positives = 240/413 (58%), Gaps = 9/413 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDF--VVHQGKN---SDNLGQVIRINLDIVYICPVG 76
             G +++I  +   V      + LG    VV +G     S    +VI    D     P G
Sbjct: 25  TFGRVTAIRGLLVEVAGPVSAMRLGGRIDVVVEGAGVAASTVPCEVIGFAGDRALAMPFG 84

Query: 77  IGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
             E +  G   LV       I PSA W GR ++ALG+PIDG   L +G     + +  PP
Sbjct: 85  SLEGVRRGCPALVRDEAAGAIRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPP 144

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
           A  R+RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR    D  +I L
Sbjct: 145 AHGRRRVGPPLDLGVRCINTFLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGL 204

Query: 195 VGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREV+EF++D LG   L +SVVVVATSDE  ++R+ A    + +AEYF  +G  VL
Sbjct: 205 VGERGREVQEFLQDDLGAAGLARSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVL 264

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
            ++DSITRFA + R+I    GE P A+GY  +VFSELPRLLER GP    +G I+ + +V
Sbjct: 265 CMIDSITRFAMAQRDIGLAGGEPPTAKGYTPTVFSELPRLLERAGPGVG-EGAISGLFTV 323

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+HN+P+AD+VR ILDGHIV+ R +AE+GRYP ++ L SVSR   +A        V
Sbjct: 324 LVEGDDHNEPVADAVRGILDGHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPARLPTV 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                ++  + +  ++  +G YR G    +D+AV  +P +  FL Q   + +S
Sbjct: 384 RRARKVLATYADMEELIRLGAYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 436


>gi|34539387|gb|AAQ74577.1| F1-ATPase alpha subunit [Neuwiedia veratrifolia]
          Length = 397

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 21/405 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGERG 199
           ++ +D   P+  GQR  +      GK      T+L+    +   +      +   +G++ 
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSSSESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILPEANALEYSILVAATASDPAPLQYLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 397


>gi|332519505|ref|ZP_08395972.1| ATP synthase F1, alpha subunit [Lacinutrix algicola 5H-3-7-4]
 gi|332045353|gb|EGI81546.1| ATP synthase F1, alpha subunit [Lacinutrix algicola 5H-3-7-4]
          Length = 526

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 101/453 (22%), Positives = 171/453 (37%), Gaps = 37/453 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q    +  +  + + G + ++         L+     G+ V   G      G V+ 
Sbjct: 11  AILKQQLSGFEASASLDEVGTVLTVGDGIVRAYGLA-NAQYGELVEFDGGAE---GIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I  +G    +  G  V    R   +       GRV++ LG PIDG   +    
Sbjct: 67  LEEDNVGIVLLGGSTGVKEGSTVKRTSRIASVKVGEGIVGRVVDTLGNPIDGKGPIAGDT 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK+T+      
Sbjct: 127 YEMPLERKAPGVIYREPVTEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKTTVCIDAIL 186

Query: 184 SDCF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +             I   VG++   V    +          + +V A + +   ++  AP
Sbjct: 187 NQKEFYDAGNPVYCIYVAVGQKASTVANIAKTLEEKGALAYTTIVAANASDPAAMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           +T  +I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 247 MTGASIGEYFRDTGRPALIVFDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RSAKIINDDSIAKEMNDLPESLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L     +F E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQFRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +D +    + +     + LKQ  +D  + +
Sbjct: 424 GSDLDAVTLNVIEKGKRNVEILKQGQNDPYTVE 456


>gi|255534973|ref|YP_003095344.1| F0F1 ATP synthase subunit alpha [Flavobacteriaceae bacterium
           3519-10]
 gi|255341169|gb|ACU07282.1| ATP synthase alpha chain [Flavobacteriaceae bacterium 3519-10]
          Length = 525

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 109/449 (24%), Positives = 176/449 (39%), Gaps = 36/449 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   +++ V + G + +I      V  L + V  G+ V     +S   G V+ +  D 
Sbjct: 16  QLANFDTQSNVEEVGTVLTIGDGIALVYGL-ENVQYGELVKF---DSGIEGIVLNLAEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  + +  GD V    R   I       GRV++ LG PIDG   +G     M +
Sbjct: 72  VGVALLGESKMVKEGDTVNRTKRISSIKVGEGMLGRVVDTLGNPIDGKGPIGGELYEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD--- 185
             K P  + RQ V +  +TGI  ID   P+  GQR  +      GK+T+      +    
Sbjct: 132 ERKAPGVIFRQPVTEPLQTGIVAIDSMIPVGRGQRELIIGDRQTGKTTVALDTILNQREF 191

Query: 186 ----CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I   VG++   V + ++          +VVV A + +   ++  AP+    
Sbjct: 192 YDAGQPVFCIYVAVGQKASTVAQIVKTLEDKGAMPYTVVVAANASDPSPMQVYAPMAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I E+F   G   L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEFFRDTGRPALIIYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAKV 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 IADDTIAAQMNDLPDTLRPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     KK+  +L     +++E         +   +D
Sbjct: 372 DLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQYKELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
                 + +     + LKQ  +     D 
Sbjct: 429 ASTQGVISKGERNVEILKQPVNSPLPVDS 457


>gi|27461553|gb|AAM95193.1| ATPase F1 alpha subunit [Dasypogon hookeri]
          Length = 411

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|34539399|gb|AAQ74583.1| F1-ATPase alpha subunit [Peperomia polybotrya]
          Length = 416

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 168/411 (40%), Gaps = 23/411 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  D V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVGIVIFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTNESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQFEP 403


>gi|209522226|ref|ZP_03270862.1| flagellar protein export ATPase FliI [Burkholderia sp. H160]
 gi|209497340|gb|EDZ97559.1| flagellar protein export ATPase FliI [Burkholderia sp. H160]
          Length = 546

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 154/444 (34%), Positives = 238/444 (53%), Gaps = 18/444 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIR 64
           A  A +     +   G ++    +      L   + +G  V+ +     +L     +V+ 
Sbjct: 104 ALRARNAIAKPLRACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPPGSSLPMAEAEVVG 161

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPID 114
            + D +++ P      +  G  V+            G  R+       GRV++A G+P+D
Sbjct: 162 FSGDKLFLMPTTEVIGLLPGARVYPLESAPIADPLAGAKRLPVGWELLGRVLDASGRPLD 221

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   LG   +   + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 222 GLGPLG-TQIDAPLSAPVINPLNREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGK 280

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           S LL   AR    + ++I L+GERGREV+EFI +    D L +SVV+ A +D SP+LR  
Sbjct: 281 SVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVIAAPADVSPLLRMQ 340

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L
Sbjct: 341 AAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPAL 400

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D 
Sbjct: 401 VERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDI 460

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR        +          ++ R++  RD+  +G Y  G D +LD+A+   P +
Sbjct: 461 EASISRAMTALIDDNHLNKTRMFKQMLSRYQRNRDLINVGAYSSGRDAVLDRAIALYPRM 520

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL+Q   + ++     ++   L
Sbjct: 521 EAFLQQGFRECANFKPSVDMLNAL 544


>gi|20146558|gb|AAM12433.1| ATP synthase alpha subunit [Cobaea scandens]
          Length = 391

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 94/399 (23%), Positives = 165/399 (41%), Gaps = 21/399 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGRAMLGRVVDALGLPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERG 199
           ++ +D   P+  GQR  +      GK+ +      +               +   +G++ 
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRSESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V ATS +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSEANALEYSILVAATSSDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
              + ++ E   +     +   +D      +++   + +
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTE 391


>gi|237653565|ref|YP_002889879.1| ATPase, FliI/YscN family [Thauera sp. MZ1T]
 gi|237624812|gb|ACR01502.1| ATPase, FliI/YscN family [Thauera sp. MZ1T]
          Length = 464

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 151/442 (34%), Positives = 231/442 (52%), Gaps = 27/442 (6%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           N +   G ++ I  +      +   +  G  ++  G       +V+  N D +Y+ P   
Sbjct: 23  NPLEVSGRLTRINGLVMEAAGIKLPLGSGCRILVPG-GGAVEAEVVGFNGDKLYMMPTDD 81

Query: 78  GEEISLGDLV-------------FHWGRFR--------ISPSACWCGRVINALGKPIDGD 116
              ++ G  V                G  R        +       GRV++  G+P+DG 
Sbjct: 82  VFGLAPGARVLPMEVGVPRLVPGKRIGPRRRAADRAKHLPVGDALLGRVVDGAGRPLDGQ 141

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   + +  +  +    + R  + +    G+R I+    +  GQR+G+FAGSG+GKS 
Sbjct: 142 GPLHTQE-TRSLQGRAINPLARAPIAQPLDVGVRAINALLTVGRGQRLGLFAGSGVGKSV 200

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAP 235
           L+ M AR    + +++ L+GERGREV+EFI      + L +SVVV A +D SP++R    
Sbjct: 201 LIGMMARYTEAEVIVVGLIGERGREVKEFIDHSLGPEGLARSVVVAAPADTSPLMRMQGA 260

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A T+AEYF  +G  VLLI+DS+TR+A + REIA   GE PV RGYP SVF+ LP L+E
Sbjct: 261 AYATTVAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPVTRGYPPSVFARLPALVE 320

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G   +  G+ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R+LA++G YP +D   
Sbjct: 321 RAGNGPEGGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRNLADQGHYPAIDIEQ 380

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR        D   +V        R++ +RD+  +G Y+PG D +LD AV   P +  
Sbjct: 381 SISRAMHNLVGDDHFNVVRQFKQFFSRYQRSRDLIAVGAYQPGGDPLLDMAVKLYPRLEA 440

Query: 416 FLKQSPSDLSSEDVFQEITKKL 437
           FL+Q   +    + ++   +KL
Sbjct: 441 FLQQGIQE---HETYEGALQKL 459


>gi|254509077|ref|ZP_05121180.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus 16]
 gi|219548010|gb|EED25032.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus 16]
          Length = 513

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  LS  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLSSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|324515277|gb|ADY46150.1| ATP synthase subunit alpha [Ascaris suum]
          Length = 459

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 18/381 (4%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPI 113
           +S   G  + +++D V +   G    I  GD+V   G    +       GRV++ALG PI
Sbjct: 5   DSGMKGMALNLDVDNVGVVVFGNDRVIREGDVVKRTGAIVDVPVGEGLLGRVVDALGNPI 64

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + K      +  K P  + R  V +   TG++ +D   P+  GQR  +      G
Sbjct: 65  DGKGPV-KCKERSRVGIKAPGIIPRIGVREPMLTGVKAVDSLVPIGRGQRELIIGDRQTG 123

Query: 174 K-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           K      T+++    +D  D       I   +G++   V + ++       +  +++V A
Sbjct: 124 KTAIAIDTIINQKRFNDGNDEKKKLYCIYVAIGQKRSTVAQIVKRLTDTGAINYTIIVSA 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ ++  L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    Y
Sbjct: 184 TASDAAPLQYLAPYSGCAMGEYFRDHGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAY 243

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 244 PGDVFYLHSRLLERAAKMNDSHGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLET 303

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A +   K++  S+   + ++ E   +     +   +D
Sbjct: 304 ELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYRE---VAAFAQFGSDLD 360

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
               + +++   + + LKQ  
Sbjct: 361 AATQQLLNRGVRLTELLKQGQ 381


>gi|237729045|ref|ZP_04559526.1| ATP synthase F1 sector subunit alpha [Citrobacter sp. 30_2]
 gi|226909667|gb|EEH95585.1| ATP synthase F1 sector subunit alpha [Citrobacter sp. 30_2]
          Length = 513

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFSVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGSPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVD-NDGFSPIEVIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|203284209|ref|YP_002221949.1| flagellum-specific ATP synthase [Borrelia duttonii Ly]
 gi|201083652|gb|ACH93243.1| flagellum-specific ATP synthase [Borrelia duttonii Ly]
          Length = 436

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 154/441 (34%), Positives = 251/441 (56%), Gaps = 13/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           M    E  + + +D   + +   G +  I  +      L     +GD   + Q       
Sbjct: 2   MDNFFEGYSNILDDI--HTISLIGRVKKIKGLLL--ESLGPKCGIGDLCLIEQSCGKKIY 57

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +      + + +GD V+    + +I+ S    GRVI++LG+PID    
Sbjct: 58  AEVLGFNGSCVSLMAYEGFDGVEVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGP 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              G+   E+       ++R    +   TG+RV+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 118 FF-GNNYKELSFSSINPLDRGVFTEQIVTGVRVLDGFLPVARGQRVGIFSGAGVGKSTLL 176

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  +       +SV++V+TSDESPI R     T
Sbjct: 177 GMIAKNSKADVNVIAFIGERGRELNEFIKYELGNGCFNRSVLIVSTSDESPISRYKGAYT 236

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  +AEYF   G +V+L+ DSITRFA++ REI+ + GE P  +GYP SVF E+P LLER 
Sbjct: 237 ATLVAEYFRDCGMDVMLLFDSITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERS 296

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G + K  G+IT   +VLV+GD+ ++PI+D+++++LDGHI+L+R L+++G YP V+ L S 
Sbjct: 297 GLNAK--GSITGFYTVLVEGDDFSEPISDNMKAVLDGHIILDRDLSDKGIYPSVNILNST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  + +++KL+S + +L+  ++   D+   G Y  G +  +D A+ + P I DFL
Sbjct: 355 SRSLHRIVNFEKQKLISKIRNLLSIYKSYEDLIKTGIYVKGSNKEVDLAIAKYPKIIDFL 414

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
            Q   +   E  F+ +  +++
Sbjct: 415 SQGMQE---ECDFENLDNEMR 432


>gi|91795099|ref|YP_564750.1| F0F1 ATP synthase subunit alpha [Shewanella denitrificans OS217]
 gi|123165632|sp|Q12HP9|ATPA_SHEDO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91717101|gb|ABE57027.1| ATP synthase F1, alpha subunit [Shewanella denitrificans OS217]
          Length = 513

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRINGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G    ++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGSYAGLAEGVKVKTTGRILEVPVGRGLLGRVLNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPVD-NDGYSPIEVIAPGVIERQSVDEPVQTGYKTVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + +   K +   +G++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TALAIDAIINQKESGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNANYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|38233644|ref|NP_939411.1| F0F1 ATP synthase subunit alpha [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564887|sp|Q6NHT1|ATPA_CORDI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|38199904|emb|CAE49570.1| ATP synthase alpha chain [Corynebacterium diphtheriae]
          Length = 542

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 106/442 (23%), Positives = 191/442 (43%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +      S  +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFP---SGVIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D + +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  ++
Sbjct: 65  VAQNLDTDRIGVVVLGNYEILKEGDEVKRTGEVLSIPVGEKFLGRVINPLGQPIDGLGAI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 EAEEQRV-LELQAPSVLQRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   VG++G  +    +        + + +V A + +S 
Sbjct: 184 DTILNQKANWESGDKSKQVRCIYVAVGQKGSTIAAVRQTLEEHGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     + +++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALGQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFATFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ+ +   S +
Sbjct: 421 LDRGARLVELLKQAENAPQSVE 442


>gi|146282926|ref|YP_001173079.1| flagellum-specific ATP synthase [Pseudomonas stutzeri A1501]
 gi|145571131|gb|ABP80237.1| flagellum-specific ATP synthase FliI [Pseudomonas stutzeri A1501]
          Length = 459

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 157/443 (35%), Positives = 242/443 (54%), Gaps = 18/443 (4%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K  ET     +  S+ L+   G +  +  +      L     +G   +    +S    + 
Sbjct: 17  KRFETYEAAIKLPSQPLL--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPTEV 72

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   +Y+ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 73  EAEVMGFSSGKLYLMPVGSLAGIAPGARVVPLVNTGRL--PMGMSMLGRVLDGAGRALDG 130

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D  + +   V   + R  + +    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 131 KGGMRAEDW-VPMDGPVINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 189

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ L+GERGREV+EFIE+ LG+   K+SVVV + +D++P++R  A
Sbjct: 190 VLLGMMTRFTEADIIVVGLIGERGREVKEFIENILGEESIKRSVVVASPADDAPLMRLRA 249

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+
Sbjct: 250 AQYCTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLV 309

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +E+  G+ITA  +VL +GD+  DPIAD+ R +LDGHIVL+R LAEEG YP +D  
Sbjct: 310 ERAGNAERGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIE 369

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+  +  SA+  +       L  R++++RD+  +G Y PG D   D A+ +   + 
Sbjct: 370 ASISRVMPQVVSAEHVRASQRFKQLWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMV 429

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            +L+Q   +    +   +   +L
Sbjct: 430 SYLRQGLDE---SEGLSQSAAQL 449


>gi|149375662|ref|ZP_01893431.1| ATP synthase F1, alpha subunit [Marinobacter algicola DG893]
 gi|149360064|gb|EDM48519.1| ATP synthase F1, alpha subunit [Marinobacter algicola DG893]
          Length = 514

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 103/447 (23%), Positives = 191/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ + +   + L         G I S++     +  L+  V  G+ +       
Sbjct: 3   QLNPSEISDIIKKRIEKLDISSDAKNEGTILSVSDGIVLIHGLAD-VMYGEMIEFANG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  E+++ G  V   GR   +       GRV++ LG P+DG
Sbjct: 60  -VFGMALNLERDSVGAVVLGDYEDLAEGQKVRCTGRILEVPVGPELMGRVVDGLGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG  DL+  +    P  + RQ V++  +TG++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGELG-TDLTSPVEKVAPGVIARQSVDEPVQTGLKAIDTMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++  + D   K I   VG++   +   +           ++VV A + +   ++ 
Sbjct: 178 AVAIDAIINQKDSGIKCIYVAVGQKQSSIAAVVRKLEEHGAMDHTIVVAAGAADPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  ++ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGTSMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRINAEEVEKLTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A +   KKL  ++   + ++ E   +     +   +
Sbjct: 358 TNLFNSGIRPAMNAGVSVSRVGGSAQTKIMKKLGGNIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ+     S
Sbjct: 415 DEATRKQLEHGQRVTELMKQNQYSPMS 441


>gi|20146598|gb|AAM12453.1| ATP synthase alpha subunit [Marcgraviastrum mixtum]
          Length = 399

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 169/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVQGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINERGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLL+R      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLKRAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQFQA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAPLAQFGSNLDAATQALLNRGARLTE 399


>gi|332159957|ref|YP_004296534.1| Secretion system apparatus ATP synthase ssaN [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325664187|gb|ADZ40831.1| Secretion system apparatus ATP synthase ssaN [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 451

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 161/402 (40%), Positives = 225/402 (55%), Gaps = 10/402 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G I  +             V LG+         D L +V+ I      + P     
Sbjct: 27  IESCGPILDVGPTLLRAHL--PGVALGELCRITSP--DMLAEVVAIEQQTALLSPFASSA 82

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  +   G   R+       GRV++ LG+PID    L       E+    P  + R
Sbjct: 83  GLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPIDAGPPLRGH--WRELDCPPPDPLTR 140

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q V++   TGIR ID       GQRIG+FA +G+GKS+LLSM  R    D ++++L+GER
Sbjct: 141 QPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVGKSSLLSMLCRGCRADIIVLALIGER 200

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G+ VLL+ D
Sbjct: 201 GREVREFLEQVLTPETRARTVVVVATSDRPALERLKGIYTATTVAEYFRERGEKVLLMAD 260

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REI   +GE P    +PTSVF+ LPRLLER G SE  +G+ITA  +VLV+G
Sbjct: 261 SLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPRLLERAGNSE--RGSITAFYTVLVEG 318

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA+ + L   L 
Sbjct: 319 DDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAIDIAASVSRIMPQIVSAEHRALAQKLR 378

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           H+   ++E   +  +G Y+ G DL  D+A+ + P I  FL+Q
Sbjct: 379 HIQACYQEIELLVRVGEYQEGQDLQADEALQRYPGICAFLQQ 420


>gi|318607492|emb|CBY28990.1| type III secretion cytoplasmic ATP synthase [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 451

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 161/402 (40%), Positives = 225/402 (55%), Gaps = 10/402 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G I  +             V LG+         D L +V+ I      + P     
Sbjct: 27  IESCGPILDVGPTLLRAHL--PGVALGELCRITSP--DMLAEVVAIEQQTALLSPFASSA 82

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  +   G   R+       GRV++ LG+PID    L       E+    P  + R
Sbjct: 83  GLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPIDAGPPLRGH--WRELDCPPPDPLTR 140

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q V++   TGIR ID       GQRIG+FA +G+GKS+LLSM  R    D ++++L+GER
Sbjct: 141 QPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVGKSSLLSMLCRGCRADIIVLALIGER 200

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G+ VLL+ D
Sbjct: 201 GREVREFLEQVLTPETRARTVVVVATSDRPALERLKGIYTATTVAEYFRERGEKVLLMAD 260

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REI   +GE P    +PTSVF+ LPRLLER G SE  +G+ITA  +VLV+G
Sbjct: 261 SLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPRLLERAGNSE--RGSITAFYTVLVEG 318

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA+ + L   L 
Sbjct: 319 DDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAIDIAASVSRIMPQIVSAEHRALAQKLR 378

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           H+   ++E   +  +G Y+ G DL  D+A+ + P I  FL+Q
Sbjct: 379 HIQACYQEIELLVRVGEYQEGQDLQADEALQRYPGICAFLQQ 420


>gi|260061236|ref|YP_003194316.1| F0F1 ATP synthase subunit alpha [Robiginitalea biformata HTCC2501]
 gi|88785368|gb|EAR16537.1| ATP synthase subunit A [Robiginitalea biformata HTCC2501]
          Length = 526

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 173/450 (38%), Gaps = 37/450 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   +   + + G +  +      V  L+     G+ V   G      G V+ +  D
Sbjct: 15  KQLSGFEASASLDEVGTVLQVGDGIARVYGLA-NAQYGELVEFDGG---LEGIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    +  G  V    R   I+      GRV++ LG PIDG  ++      M 
Sbjct: 71  NVGVVLLGPSRGVVEGATVKRTQRIASINVGEGIVGRVVDTLGNPIDGKGAITGETYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TG++ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIFRQPVNEPLQTGVKAIDAMIPIGRGQRELVIGDRQTGKTTVCIDTIINQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +       L  + +V A + +   ++  AP    
Sbjct: 191 FYDAGEPVYCIYVAIGQKASTVAGIAKTLEDKGALAYTTIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERSAK 310

Query: 300 SE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
                                 K  G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VIADDDIAKDMNDLPDVLKDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           + L  +G  P ++   SVSR+   A     KK+  +L     +F E         +   +
Sbjct: 371 QDLFNQGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD-LSSED 428
           D      + +     + LKQ+ +D  + ED
Sbjct: 428 DAATLNVIEKGRRNVEILKQAQNDPFTVED 457


>gi|302387793|ref|YP_003823615.1| ATPase, FliI/YscN family [Clostridium saccharolyticum WM1]
 gi|302198421|gb|ADL05992.1| ATPase, FliI/YscN family [Clostridium saccharolyticum WM1]
          Length = 433

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 161/442 (36%), Positives = 246/442 (55%), Gaps = 17/442 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--N 58
           M K L  L    E          G I +I  +    +       +GD      ++     
Sbjct: 1   MFKELSDLIMKTETIDHI-----GKIENIVGMSMEASG--GKASIGDIAYIYNEDRKEQI 53

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
             +V+    D + +        I+ G  V +  R  +I       GR+I+A G+P+DG  
Sbjct: 54  PVEVVGFKDDKIQLMAYENMNGIAAGSFVRNTKRRLKIPVGDFLRGRIIDAKGEPMDGKG 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                     + +     + R  +    + G++ ID    +  GQRIG+FAGSG+GKSTL
Sbjct: 114 PFDSSRYYY-VENPYINPLTRPPITDRLEFGVKAIDGMNTIGKGQRIGIFAGSGVGKSTL 172

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +++LVGERGREVREFI +D   + +++SV+VVATSD+  +LR   PL
Sbjct: 173 LGMIARNVKADINVVALVGERGREVREFIEKDLGPEGMERSVLVVATSDQPAMLRMKCPL 232

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A TIAEYF ++G +VLL++DS+TRFA + REI    GE PVARGY  S+++E P+LLER
Sbjct: 233 VATTIAEYFKNQGKDVLLMMDSLTRFAMAQREIGLAIGEPPVARGYTPSIYAEFPKLLER 292

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G     +G+IT + +VLV+GD+ N+PIAD+VR I+DGHIVL+R LA    +P +D  AS
Sbjct: 293 SGNF--GEGSITGIYTVLVEGDDTNEPIADTVRGIVDGHIVLSRKLANANHFPAIDVSAS 350

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL     S + ++L S +  ++  +E+  D+  IG Y+ G +  LD+A+ ++  +  F
Sbjct: 351 ISRLMTNIVSEEHRRLASEIRDILSIYEKNEDLISIGAYKSGTNPKLDQAIARIDKVNQF 410

Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438
           L Q   +    D +++I  K++
Sbjct: 411 LCQGIQE---NDSYEDILVKMK 429


>gi|153834322|ref|ZP_01986989.1| ATP synthase F1, alpha subunit [Vibrio harveyi HY01]
 gi|148869330|gb|EDL68344.1| ATP synthase F1, alpha subunit [Vibrio harveyi HY01]
          Length = 513

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|288922993|ref|ZP_06417150.1| ATP synthase F1, alpha subunit [Frankia sp. EUN1f]
 gi|288345669|gb|EFC80041.1| ATP synthase F1, alpha subunit [Frankia sp. EUN1f]
          Length = 552

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 94/447 (21%), Positives = 175/447 (39%), Gaps = 26/447 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCL-----GDFVVHQGKN 55
           +    E +     +Y  +     G    +  V  T   +++   L      + +   G  
Sbjct: 4   LSIRPEEIRDALREYVDSFQATSGEREEVGRVVVTGDGIARVEGLPHTMTNELLEFHGG- 62

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              LG  + + +  +    +G  E I  G  V   G    +     + GRV++ LG+PID
Sbjct: 63  --VLGLALNLEVGEIGCVILGEAEHIEEGQEVRRTGEILAVPVGDGFLGRVVDPLGRPID 120

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  +  + P  + RQ V++  +TGI+ ID  T +  GQR  +      GK
Sbjct: 121 GLGDI-TSEGTRALELQAPTVVERQPVKEPLQTGIKAIDAMTAIGRGQRQLIIGDRQTGK 179

Query: 175 STLLSMFARSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           +T+      +              K +   +G++   +RE +           + +V A 
Sbjct: 180 TTVAIDAIINQRENWLSGDPKKQVKCVYVAIGQKKSTIREVVNTLEEAGALAYTTIVAAP 239

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +DE    + +A  T   I +++   G + L++ D +++ A + R I+      P    YP
Sbjct: 240 ADEPAGFKYIAAYTGSAIGQHWMYNGQHALVVFDDLSKQAEAYRAISLLLRRPPGREAYP 299

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   
Sbjct: 300 GDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQIFLESD 359

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K +   L   + ++ E         +   +D 
Sbjct: 360 LFNQGVRPAINVGTSVSRVGGSAQVKAMKSVAGRLRLDLAQYRELE---AFSAFGSDLDK 416

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
                + +   + + LKQ  +   S +
Sbjct: 417 ASRDQLARGARLVELLKQPQNKPFSVE 443


>gi|117927859|ref|YP_872410.1| F0F1 ATP synthase subunit alpha [Acidothermus cellulolyticus 11B]
 gi|158512365|sp|A0LSL4|ATPA_ACIC1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|117648322|gb|ABK52424.1| ATP synthase F1 subcomplex alpha subunit [Acidothermus
           cellulolyticus 11B]
          Length = 554

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 94/447 (21%), Positives = 176/447 (39%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L +    Y+ ++  +   G ++        +  L       + +  +      LG  +
Sbjct: 13  AALEEFVSSYTPDVASREEVGRVTEAGDGIARIEGL-PSTMANELLRFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  +    +G  E I  G  V   G    +     + GRV++ LG+P+DG   +   
Sbjct: 69  NLDVREIGAVILGPFEGIEEGQTVKRTGEVLSVPVGDGFLGRVVDPLGRPLDGKGEIV-A 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  + RQ V++  +TGI+ ID  T +  GQR  +      GK      T+
Sbjct: 128 EGRRALEIQAPSVVQRQPVKEPLQTGIKAIDAMTAIGRGQRELIIGDRQTGKTAVAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     K I   +G++G  +               + +V A + +    +
Sbjct: 188 INQRANWESGDPKLQVKCIYVAIGQKGSTIAAVRSALEAAGAMEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  KG + L++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYKGQHALIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++T +  +   G++ +  I  +V SI DG I L   L   G  P
Sbjct: 308 RLLERCAKLSDAMGGGSLTGLPIIETKGNDVSAYIPTNVISITDGQIFLETDLFNSGVRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D      + +
Sbjct: 368 AINVGISVSRVGGNAQLKAMKQVAGRLRLDLAQYRELEAFAAFG---SDLDAASRAQLER 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   S    E+    +  
Sbjct: 425 GARLVELLKQPQYSPYPVEEQVVSLWA 451


>gi|320154856|ref|YP_004187235.1| ATP synthase subunit alpha [Vibrio vulnificus MO6-24/O]
 gi|81587881|sp|Q8DDH0|ATPA_VIBVU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|319930168|gb|ADV85032.1| ATP synthase alpha chain [Vibrio vulnificus MO6-24/O]
          Length = 513

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 102/456 (22%), Positives = 189/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRQSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + ++    + + +KQ     +   VF +  
Sbjct: 413 LDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|238786394|ref|ZP_04630322.1| secretion system apparatus ATP synthase ssaN [Yersinia bercovieri
           ATCC 43970]
 gi|238712702|gb|EEQ04786.1| secretion system apparatus ATP synthase ssaN [Yersinia bercovieri
           ATCC 43970]
          Length = 429

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 158/425 (37%), Positives = 227/425 (53%), Gaps = 16/425 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V  G I  +             V LG+    +    D L +V+ I      + P      
Sbjct: 12  VYRGPILDVGPTLVRAHL--PGVALGELCQVEAP--DMLAEVVAIEQKTALLSPFAPPAG 67

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   RI       GR+++ LG PID    L       E+ S  P  + RQ
Sbjct: 68  LRCGQWVRPLGHSHRIRTGPDLLGRILDGLGVPIDSGPPLRGH--WCELDSAPPDPLARQ 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++   TGIR +D       GQRIG+FA +G+GKSTLLSM       + ++++L+GERG
Sbjct: 126 PIDQILTTGIRAVDGLLSCGEGQRIGIFAAAGVGKSTLLSMLCAGSRAEVMVLALIGERG 185

Query: 200 REVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF++     +   ++VVVVATSD   + R     TA  +AEYF  +G  VLL+ DS
Sbjct: 186 REVREFLDQVLTPEARARTVVVVATSDRPALERLKGIYTATRVAEYFRDRGLKVLLMADS 245

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REI   +GELP A  +P SVF+ LPRLLER G S   +G+ITA  +VLV+GD
Sbjct: 246 LTRYARAAREIGLAAGELPAAGSFPPSVFAALPRLLERAGNSA--QGSITAFYTVLVEGD 303

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  + +   L   L  
Sbjct: 304 DMNEPVADEVRSLLDGHIVLSRKLAGAGHYPAIDIAASVSRIMPQIVTDEHLALAQKLRQ 363

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ------SPSDLSSEDVFQE 432
           +   ++E   +  +G Y+ G D   D+A+ + P I  FL+Q      +P  +S      +
Sbjct: 364 MQACYQEIELLVRVGEYQAGDDPQADEALARYPTICAFLQQENRLSCNPDAVSLSSTLAQ 423

Query: 433 ITKKL 437
           + + L
Sbjct: 424 LAQAL 428


>gi|323527695|ref|YP_004229848.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1001]
 gi|323384697|gb|ADX56788.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1001]
          Length = 565

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 234/432 (54%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G  V+ +     +L     +V+  + D +++ P  
Sbjct: 132 RACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPPGSSLPMAEAEVVGFSGDKLFLMPTT 189

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  VF            G  R+       GRV++A G+P+DG   LG      
Sbjct: 190 EVIGLLPGARVFPLESAPIADPMAGAKRLPVGWELLGRVLDASGRPLDGLGPLG-AQTDA 248

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 249 PLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 308

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    + L +SVV+ A +D SP+LR  A   + ++AEYF
Sbjct: 309 AEVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQAAAYSTSLAEYF 368

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 369 RDQGKHVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERTGNGPAGGG 428

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR      
Sbjct: 429 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASISRAMTALI 488

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +          ++ R++  RD+  +G Y  G D +LD+A+   P +  FL+Q   + +
Sbjct: 489 DDNHLDKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRMEAFLQQGFRECA 548

Query: 426 SEDVFQEITKKL 437
           + +   E+   L
Sbjct: 549 NFEPSIEMLDAL 560


>gi|193890929|gb|ACF28624.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 409

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 93/404 (23%), Positives = 167/404 (41%), Gaps = 23/404 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQQQ 396


>gi|27461557|gb|AAM95195.1| ATPase F1 alpha subunit [Calectasia cyanea]
          Length = 418

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|323493007|ref|ZP_08098143.1| F0F1 ATP synthase subunit alpha [Vibrio brasiliensis LMG 20546]
 gi|323312743|gb|EGA65871.1| F0F1 ATP synthase subunit alpha [Vibrio brasiliensis LMG 20546]
          Length = 513

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|163848587|ref|YP_001636631.1| F0F1 ATP synthase subunit alpha [Chloroflexus aurantiacus J-10-fl]
 gi|222526522|ref|YP_002570993.1| F0F1 ATP synthase subunit alpha [Chloroflexus sp. Y-400-fl]
 gi|190358245|sp|A9WGS6|ATPA_CHLAA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|163669876|gb|ABY36242.1| ATP synthase F1, alpha subunit [Chloroflexus aurantiacus J-10-fl]
 gi|222450401|gb|ACM54667.1| ATP synthase F1, alpha subunit [Chloroflexus sp. Y-400-fl]
          Length = 522

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 104/425 (24%), Positives = 179/425 (42%), Gaps = 21/425 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V  G + ++      ++ L Q V   + +F    G+N    G  + +  D V    +G  
Sbjct: 27  VNVGTVIAVGDGVARLSGLDQVVASEIVEFPPKAGRNESIYGIALNLEQDSVAAIILGDD 86

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E I  GD+V   GR   +       GRV+N LG+PIDG   +   + +  I    P  + 
Sbjct: 87  ETIEEGDMVTSTGRVISVPVGQGLLGRVVNPLGQPIDGKGPIVY-EKTRPIERIAPGVIT 145

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLV 195
           R+ V+   +TGI  ID   P+  GQR  +      GK+ +      +        I   +
Sbjct: 146 RKSVDTPVQTGIIAIDALIPIGRGQRELIIGDRQTGKTAVAIDTILNQKGQGMVCIYVAI 205

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG----- 249
           G+R  +V + +        ++ ++VV AT+ ES  L+ +AP     + E     G     
Sbjct: 206 GQRRAQVAQVVGTLERFGAMEYTIVVSATASESAALQYIAPYAGCAMGEEIMENGVMLNG 265

Query: 250 ---DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--K 304
               + L++ D +++ A + R+++      P    YP  VF    RLLER     +E   
Sbjct: 266 QLVKDALIVYDDLSKHAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLNEEYGG 325

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G++TA+  +    ++ +  I  +V SI DG I L   L   G+ P ++   SVSR+   A
Sbjct: 326 GSLTALPVIETQANDVSAYIPTNVISITDGQIYLESDLFNAGQRPALNVGISVSRVGGAA 385

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD- 423
            +   + +   L   + +F   RD+     +   +D      + +   + + LKQ     
Sbjct: 386 QTRAMRAVAGKLKGELAQF---RDLAAFAQFASDLDATTKAQIERGQRLQELLKQPQYQP 442

Query: 424 LSSED 428
           L  ED
Sbjct: 443 LPVED 447


>gi|164685322|gb|ABY66607.1| atp1 [Tetrastigma diepenhorstii]
          Length = 413

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVSKQPQ 399


>gi|134297243|ref|YP_001120978.1| flagellar protein export ATPase FliI [Burkholderia vietnamiensis
           G4]
 gi|134140400|gb|ABO56143.1| flagellar protein export ATPase FliI [Burkholderia vietnamiensis
           G4]
          Length = 508

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 155/446 (34%), Positives = 232/446 (52%), Gaps = 22/446 (4%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQV 62
           L  LA    + L +   G ++    +      L   + +G     +      L     +V
Sbjct: 60  LHTLATRSQRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPYAQAEV 117

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKP 112
           +  + + +++ P      +  G  V+            G  R+       GRV++A G+P
Sbjct: 118 VGFSGERLFLMPTTDVAGVLPGARVWPLEAAPVADPLAGAKRLPVGWEMLGRVVDASGRP 177

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG   L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+
Sbjct: 178 LDGLGPL-AAKVDAPLSAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGV 236

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILR 231
           GKS LL   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR
Sbjct: 237 GKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLR 296

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 297 MQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 356

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +
Sbjct: 357 ALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAI 416

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P
Sbjct: 417 DIEASISRAMTALIDEGHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYP 476

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL+Q   + +    F      L
Sbjct: 477 RIEAFLQQGFRECA---PFASSLAAL 499


>gi|110835589|ref|YP_694448.1| ATP synthase subunit alpha [Alcanivorax borkumensis SK2]
 gi|118573472|sp|Q0VKX2|ATPA_ALCBS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110648700|emb|CAL18176.1| ATP synthase, alpha subunit [Alcanivorax borkumensis SK2]
          Length = 514

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 184/447 (41%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKSRIAKLDTSTEARNEGTVVSVSDGIVRIHGLAD-VMFGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G  V   GR    P      GRV++ALG PIDG
Sbjct: 60  -IYGMALNLEQDSVGAVVLGDYLGLAEGQKVRCTGRILEVPTGPEMLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + +   +  +    P  + R+ V +  +TG + ID   P+  GQR  +     IGK+
Sbjct: 119 KGPI-EAKQTDAVEKVAPGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +      +  D   K +   +G++   +   +         + +++V A++ +   ++ 
Sbjct: 178 AVAVDAIINQKDSGIKCVYVAIGQKQSTIANVVRKLEEHGAMENTIIVAASASDPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     ++              G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERAAKVNEDYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNSGIRPAMNAGVSVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +     + + +KQ      S
Sbjct: 415 DDSTREQLEHGQAVTELMKQKQYSPMS 441


>gi|111018475|ref|YP_701447.1| F0F1 ATP synthase subunit alpha [Rhodococcus jostii RHA1]
 gi|118573487|sp|Q0SGP7|ATPA_RHOSR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|110818005|gb|ABG93289.1| H(+)-transporting two-sector ATPase alpha subunit [Rhodococcus
           jostii RHA1]
          Length = 547

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 185/448 (41%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E+Y+ +   +      G ++  +     V+ L       + +   G     LG
Sbjct: 9   DEIRSAIENYTASYSPEASREEVGLVTDTSDGIAHVSGL-PSAMANELLEFPGG---ILG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G  E I  G  V   G    +     + GRVIN LG+PIDG   +
Sbjct: 65  VALNLDATEIGAVILGDYENIQEGQEVKRTGDVLSVPVGDAFLGRVINPLGQPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            + + +  +  +    + RQ VE+  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 125 -ESNETRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
             +L+  A  +  D+      I   +G++G  +               + +V A + +S 
Sbjct: 184 DAILNQKANWETGDEKQQVRCIYVAIGQKGSTIAGVKAALEEQGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIGQHWMYQGKHVLVVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERSAKLSDALGGGSLTALPIIETKANDVSAYIPTNVISITDGQVFLESDLFNKG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   + +F E         +   +D      
Sbjct: 364 VRPAINVGISVSRVGGAAQTKGMKKVSGSLRLELAQFRELE---AFSAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           + +   + + LKQ   S +  ED    I
Sbjct: 421 LERGARLVELLKQDQYSPIPVEDQIVSI 448


>gi|254229973|ref|ZP_04923374.1| ATP synthase F1, alpha subunit [Vibrio sp. Ex25]
 gi|151937475|gb|EDN56332.1| ATP synthase F1, alpha subunit [Vibrio sp. Ex25]
          Length = 523

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 68

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 69  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  ++  +    P  ++R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 127 GKGPI-EAKMTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQIGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D     I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 186 TALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|164685594|gb|ABY66743.1| atp1 [Fagus grandifolia]
          Length = 413

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|118619160|ref|YP_907492.1| F0F1 ATP synthase subunit alpha [Mycobacterium ulcerans Agy99]
 gi|158512388|sp|A0PUK2|ATPA_MYCUA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118571270|gb|ABL06021.1| ATP synthase alpha chain AtpA [Mycobacterium ulcerans Agy99]
          Length = 549

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 99/434 (22%), Positives = 174/434 (40%), Gaps = 23/434 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +    ++ +   +  G +         V  L   V   + +   G     LG  + 
Sbjct: 13  SAIEEYVGSFTSDTSREEVGTVVDAGDGIAHVEGL-PSVMTQELLEFPGG---VLGVALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V    +G  E I  G  V   G    +     + GRVIN LG+PIDG   + K +
Sbjct: 69  LDEHSVGAVILGNSENIEEGQQVKRTGEVLSVPVGDAFLGRVINPLGQPIDGRGDI-KAE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  + RQ V++  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 128 TRRALELQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +     +  D     + +   VG++G  +               + +V A + +S   + 
Sbjct: 188 NQRQNWETGDPKKQVRCVYVAVGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   +A+++   G +VL++ D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPYTGSAVAQHWMYDGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG   L   L  +G  P 
Sbjct: 308 LLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + ++ E         +   +D      + + 
Sbjct: 368 INVGVSVSRVGGAAQIKAIKEVAGSLRLDLSQYRELE---AFAAFASDLDATSKAQLDRG 424

Query: 411 PIIYDFLKQSPSDL 424
             + + LKQ     
Sbjct: 425 ARLVELLKQPQYQP 438


>gi|66821915|gb|AAY57285.1| ATPase alpha subunit [Hortonia floribunda]
          Length = 418

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 170/414 (41%), Gaps = 23/414 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           ++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 406


>gi|312139176|ref|YP_004006512.1| ATP synthase subunit alpha [Rhodococcus equi 103S]
 gi|325673519|ref|ZP_08153210.1| ATP synthase F1 sector alpha subunit [Rhodococcus equi ATCC 33707]
 gi|311888515|emb|CBH47827.1| ATP synthase alpha chain AtpA [Rhodococcus equi 103S]
 gi|325555540|gb|EGD25211.1| ATP synthase F1 sector alpha subunit [Rhodococcus equi ATCC 33707]
          Length = 547

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 186/448 (41%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E+Y+ +   +      G +S  +     +T L       + +   G     LG
Sbjct: 9   DEIRSAIENYTASYSPEASREEVGVVSDTSDGIAHITGL-PSAMANELLEFPGG---VLG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G  E I  G  V   G    +     + GRV++ LG+PIDG   +
Sbjct: 65  VALNLDATEIGAVVLGDYEHIEEGQEVKRTGDVLSVPVGDGYLGRVVDPLGRPIDGLGDI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              + +  +  +    + RQ VE+  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 125 ETTE-TRALELQAATVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
             +L+  A     D     + I   +G++G  +    +          + +V A + +S 
Sbjct: 184 DAILNQKANWATGDPKQQVRCIYVAIGQKGSTIAGVKQALEEQGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERSAKLSDELGGGSLTALPIIETKANDVSAYIPTNVISITDGQVFLESDLFNKG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   + +F E         +   +D      
Sbjct: 364 IRPAINVGISVSRVGGAAQTKGMKKVSGSLRLELAQFRELE---AFSAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           + +   + + LKQ   S ++ ED    I
Sbjct: 421 LERGQRLVELLKQDQYSPIAVEDQIISI 448


>gi|164685652|gb|ABY66772.1| atp1 [Vitis sp. CWD 96.701]
          Length = 413

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKLLNSKATSDSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVSKQPQ 399


>gi|283832664|ref|ZP_06352405.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
 gi|291072338|gb|EFE10447.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
          Length = 456

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 158/429 (36%), Positives = 238/429 (55%), Gaps = 19/429 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD----NLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   V + ++ +       +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCVIERQDGNETQEVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              E +  G  V+           G+ ++       GRV++  GKP+DG  +    + + 
Sbjct: 83  EEVEGVLPGARVYAKNIAGEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPAPDTTE-TG 140

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR   
Sbjct: 141 ALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQ 200

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F
Sbjct: 201 ADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 260

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 261 RDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGG 320

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      
Sbjct: 321 SVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRHLAEAGHYPAIDIEASISRAMTALI 380

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + +
Sbjct: 381 SEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEAFLQQGIFERA 440

Query: 426 S-EDVFQEI 433
             ED  Q +
Sbjct: 441 DWEDSLQAL 449


>gi|20146586|gb|AAM12447.1| ATP synthase alpha subunit [Lysimachia vulgaris]
          Length = 398

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 167/406 (41%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      +  L++ +  G  V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVEDGIARIYGLNE-IQAGXMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 398


>gi|254294575|ref|YP_003060598.1| flagellum-specific ATP synthase [Hirschia baltica ATCC 49814]
 gi|254043106|gb|ACT59901.1| ATPase, FliI/YscN family [Hirschia baltica ATCC 49814]
          Length = 495

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 175/442 (39%), Positives = 256/442 (57%), Gaps = 11/442 (2%)

Query: 6   ETLAQLAEDYSKNLVVQG--GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           E + Q A    KN+  Q   G + ++  +    T  ++ + LG +     K     G+++
Sbjct: 14  EHVLQQAIKDIKNIEKQMFEGRVVAVEGLRIEATGPAEALRLGAYARFGNKEGPR-GELV 72

Query: 64  RINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
               +          + +  G  V F      +  S  W GRV++A G P+DG   L +G
Sbjct: 73  GFEGERAVFLACDDVDGLRPGAAVCFSADDAIVRVSNSWLGRVVDAFGAPVDGGLPLAQG 132

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +S +I +  P A +R RV +    G+R +D F P   GQR+G+FAGSG+GKSTL+SM A
Sbjct: 133 SISRQIKAVPPAAHSRARVSEPMSLGVRALDGFAPCAVGQRMGLFAGSGVGKSTLMSMLA 192

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D V+I L+GERGREVREF+ED LG + L +SVVV ATSDE+   R+ A    + +
Sbjct: 193 RNAQADVVVIGLIGERGREVREFVEDTLGIEGLARSVVVSATSDETAPRRRRAAWMTMAV 252

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +G  VL +LDS+TRFA + REI   +GE P  +GY  SVFSELP+LLER GP +
Sbjct: 253 AEHFRDQGYKVLCLLDSVTRFAMAQREIGLAAGEPPTTKGYTPSVFSELPKLLERAGPGK 312

Query: 302 -----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
                + +G IT + +VLVDGD+HN+P+AD+VR ILDGHIV++R +AE GRYP +D L S
Sbjct: 313 IVPAGQPQGQITGLFTVLVDGDDHNEPVADAVRGILDGHIVMDRKIAERGRYPAIDVLKS 372

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRLA   ++ +  ++      L+  + +  ++  IG Y  G D  +D+AV   P I   
Sbjct: 373 LSRLASHLYTPETAEIARQARRLMSLYSDMEELVRIGAYARGADPEVDRAVQLSPDIEKI 432

Query: 417 LKQSPSDLS-SEDVFQEITKKL 437
           L Q  ++ S  E+ F  + + L
Sbjct: 433 LTQHVNENSPPEETFAMLAQVL 454


>gi|39546131|gb|AAR28049.1| ATP synthase alpha subunit [Pseudowintera axillaris]
          Length = 428

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 169/414 (40%), Gaps = 23/414 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           ++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 406


>gi|332143474|ref|YP_004429212.1| F0F1 ATP synthase subunit alpha [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226739840|sp|B4RS83|ATPA_ALTMD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|327553496|gb|AEB00215.1| F0F1 ATP synthase subunit alpha [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 513

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 102/448 (22%), Positives = 183/448 (40%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +   +   V       G I ++T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKKRIEQFNVSSEARNEGTIVAVTDGIIRIHGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYAIALNLERDSVGAVVMGPYADLKEGDKVQSTGRILEVPVGNALLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++        +    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAIDAAGFE-PVEKIAPGVIERQSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K +   VG++   +   +           ++VV A++ ES  L+
Sbjct: 176 TAMAVDAIINQKGTGIKCVYVAVGQKASTIANVVRKLEEHGALDHTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEQYVENYTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAVNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    + +     + + +KQ      S
Sbjct: 413 LDDATREQLEHGERVTELMKQKQYAPLS 440


>gi|262276392|ref|ZP_06054201.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
 gi|262220200|gb|EEY71516.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP
           101886]
          Length = 438

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 150/438 (34%), Positives = 238/438 (54%), Gaps = 5/438 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M    E L+ L  D+     V  G +  +     T+  +     +G     +  N     
Sbjct: 1   MLNLSERLSALKTDHLSIRPVASGKLVRVVG--LTLEAIGCRAPVGSLCKVETLNGTVDA 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + +Y+ P      +  G  V    G   I       GRVI+ +G P+DG   +
Sbjct: 59  EVVGFSGETLYLMPSEQISGVLPGARVTPIIGEQGIPVGLELLGRVIDGVGNPLDGLGDI 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G  +      V   + R+ ++     GI+ I+    +  GQRIG+FAGSG+GKS  L 
Sbjct: 119 FTG-QTAPFTPAVINPLARKPIDAPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R      V++ L+GERGREV+EFI++ LG +  +++VVV A +D SP++R     TA
Sbjct: 178 MMTRGTTAQVVVVGLIGERGREVKEFIDEILGKEGRERAVVVAAPADASPLMRLKGCQTA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G
Sbjct: 238 LTIAEFFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVS
Sbjct: 298 NGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSREMADAGHYPAIDVERSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     + +   +  ++  ++    + +D+  IG Y+PG D  +D+A    P +  +L+
Sbjct: 358 RVMPNIVNDEHMLMARAVRQVLSVCRKNQDLVSIGAYKPGTDQAIDQAFTLKPRLDMYLQ 417

Query: 419 QSPSDLSSEDVFQEITKK 436
           Q   ++   D+   + + 
Sbjct: 418 QGMKEVVPYDMCVNMLRL 435


>gi|319953082|ref|YP_004164349.1| ATP synthase f1 subcomplex alpha subunit [Cellulophaga algicola DSM
           14237]
 gi|319421742|gb|ADV48851.1| ATP synthase F1 subcomplex alpha subunit [Cellulophaga algicola DSM
           14237]
          Length = 526

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 107/453 (23%), Positives = 173/453 (38%), Gaps = 37/453 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q    +     + + G +  I      V  LS  V  G+ V  +G      G V+ 
Sbjct: 11  AILKQQLSGFEATASLDEVGTVLQIGDGIARVYGLS-NVQYGELVEFEGG---LQGIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +    +I  G +V        I       GRV+N LGKPIDG  ++    
Sbjct: 67  LEEDNVGVVLLSPSRDIKEGTVVKRTQTIASIEVGEGIVGRVVNTLGKPIDGKGAIAGEL 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      
Sbjct: 127 YKLPLERKAPGVIYRQPVTEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKTTVCIDAIL 186

Query: 184 SDCF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +             I   +G++   V    +    +     + +V A + +   ++  AP
Sbjct: 187 NQKEFYDAGKPVYCIYVAIGQKASTVANIAQTLEDNGALAYTTIVAANASDPASMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G   L+I D +++ A + REI+      P    YP  VF    RLLE
Sbjct: 247 FAGAAIGEYFRDTGRPALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RSAKIIANDAIAKDMNDLPDALKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L + L  +G  P ++   SVSR+   A     KK+  +L     +F E         +
Sbjct: 367 IFLEQDLFNQGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQFRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +D      + +     + LKQ+ +D  + +
Sbjct: 424 GSDLDAATLNVIEKGRRNVEILKQAQNDPYTVE 456


>gi|292487020|ref|YP_003529890.1| ATP synthase in type III secretion system [Erwinia amylovora
           CFBP1430]
 gi|291552437|emb|CBA19482.1| ATP synthase in type III secretion system [Erwinia amylovora
           CFBP1430]
          Length = 452

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 153/450 (34%), Positives = 244/450 (54%), Gaps = 20/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GK 54
           M    + L Q A+ + + L     V + G ++ I+ +   + C+     +GD    Q   
Sbjct: 1   MSALQQRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSD 58

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
               L +++  + + + +  +G  + IS G  +        I  S    G V++  G+ +
Sbjct: 59  GGSVLSEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRAL 118

Query: 114 DGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +          G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FA
Sbjct: 119 EPGGHSAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFA 178

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   ++V++ ATSD S
Sbjct: 179 GAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRS 238

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV+
Sbjct: 239 SMERARAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVY 298

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   
Sbjct: 299 TLLPRLVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNH 356

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR                L  L+  +++   +  +G Y+PG D + D AV
Sbjct: 357 YPAIDVLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAV 416

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   II  FL+QS   + + D F++   +L
Sbjct: 417 NANDIINRFLRQS---MRAPDPFEQTQYQL 443


>gi|289643101|ref|ZP_06475231.1| ATP synthase F1, alpha subunit [Frankia symbiont of Datisca
           glomerata]
 gi|289507065|gb|EFD28034.1| ATP synthase F1, alpha subunit [Frankia symbiont of Datisca
           glomerata]
          Length = 550

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 97/448 (21%), Positives = 176/448 (39%), Gaps = 28/448 (6%)

Query: 1   MQKNLETLAQLAEDY------SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           +    E +     DY      S     + G +         V  L  +    + +   G 
Sbjct: 4   LSIRPEEIRAALRDYVDSYQASAGEREEVGRVVVAGDGIARVEGL-PHAMTNELLEFHGG 62

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
               LG  + +++  +    +G  E I  G  V   G    +     + GRV++ LG+PI
Sbjct: 63  ---VLGLALNLDVGEIGCVLLGESEHIEEGQEVRRTGEILSVPVGDGFLGRVVDPLGRPI 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   + S  +  + P  + RQ V++  +TGI+ ID  T +  GQR  +      G
Sbjct: 120 DGLGEIVSTE-SRALELQAPTVVQRQPVKEPLQTGIKAIDAMTAIGRGQRQLIIGDRQTG 178

Query: 174 K-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           K      T+++        D     K +   +G++   +R+ +           + +V A
Sbjct: 179 KSSVALDTIINQRENWATGDPKLQVKCVYVAIGQKKSTIRDVLNTLEETGALAYTTIVAA 238

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D+    + +AP T   I +++   G + L++ D +++ A + R I+      P    Y
Sbjct: 239 PADQPAGFKYLAPYTGSAIGQHWMYNGQHGLIVFDDLSKQAEAYRAISLLLRRPPGREAY 298

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E   G++T +  +   G++ +  I  +V SI DG I L  
Sbjct: 299 PGDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKGNDISAYIPTNVISITDGQIFLET 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A     K +   L   + ++ E         +   +D
Sbjct: 359 DLFNQGVRPAINVGTSVSRVGGSAQVKAMKSVAGRLRLDLAQYRELE---AFSAFGSDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +   + + LKQ      S +
Sbjct: 416 KASRAQLDRGARLVELLKQPQFQPFSVE 443


>gi|290473118|ref|YP_003465979.1| membrane-bound ATP synthase, F1 sector subunit alpha [Xenorhabdus
           bovienii SS-2004]
 gi|289172412|emb|CBJ79179.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 513

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVNDGIIRIHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L + D    +    P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGAL-ENDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +      N    ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHNALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESALFNAGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K +     + + LKQ      S
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQYQPMS 440


>gi|283955375|ref|ZP_06372874.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793135|gb|EFC31905.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 459

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 163/436 (37%), Positives = 238/436 (54%), Gaps = 6/436 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV 62
           NLE L        +NL    G I+ I++    +  L   V  +   V ++ +N + L  V
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  S+ +
Sbjct: 60  VEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGSI-E 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 VSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            ++      +++L+GERGRE+ EFI+  LG     +V++VATSD+S ++RK     A+++
Sbjct: 179 VKNSKAPIKVVALIGERGREIPEFIQKNLGGKFDDTVLIVATSDDSALMRKYGAFCAMSV 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E
Sbjct: 239 AEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERAGKEE 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 299 G-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P
Sbjct: 358 SDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+  ++
Sbjct: 418 EESFEFNQTLELLSQI 433


>gi|261341507|ref|ZP_05969365.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316304|gb|EFC55242.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
          Length = 439

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 148/412 (35%), Positives = 224/412 (54%), Gaps = 7/412 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           NL    G +  +  +     C+   + +G     +G   + +  QV+  + D+ ++ P  
Sbjct: 17  NLARVAGRLVRVAGILL--ECVGCRLAVGQLCQVEGGEGELIDAQVVGFDRDVTFLMPFK 74

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G  VF   +   +     W GRV+N LG+PID    L  GD  +         
Sbjct: 75  QPAGLMAGARVFPMDKQHGVLIGDQWLGRVVNGLGEPIDDKGKL-TGDTVLPQQLPQVHP 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQ V +    G+R I+    +  GQR+G+ AGSG+GKS LL M  R    + V++ L+
Sbjct: 134 LKRQPVAEPLDVGVRAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRYTQAEVVVVGLI 193

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EFI         +KSV+V A +DESP++R  A     TIA Y+  KG +VLL
Sbjct: 194 GERGREVKEFIDHSLGEAGRRKSVIVAAPADESPLMRIKATELCHTIASYYRDKGKDVLL 253

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +VL
Sbjct: 254 LVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGLIPKLVESAGNSESL-GSMTAIYTVL 312

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +    D ++   
Sbjct: 313 AEGDDQQDPIVDCARAVLDGHIVLSRHLAEAGHYPAIDIGQSISRCMSQVTEQDHQRAAR 372

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +L  L   ++  + +  +GGY  G D + D+AV+  P I  FL+Q   + + 
Sbjct: 373 TLKQLYAEYQSIKPLIPLGGYVAGADPVADRAVNLSPAITRFLQQEVQNAAP 424


>gi|15642759|ref|NP_232392.1| F0F1 ATP synthase subunit alpha [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121729377|ref|ZP_01682044.1| ATP synthase F1, alpha subunit [Vibrio cholerae V52]
 gi|153827191|ref|ZP_01979858.1| ATP synthase F1, alpha subunit [Vibrio cholerae MZO-2]
 gi|227082878|ref|YP_002811429.1| ATP synthase F1, alpha subunit [Vibrio cholerae M66-2]
 gi|229508279|ref|ZP_04397783.1| ATP synthase alpha chain [Vibrio cholerae BX 330286]
 gi|229508631|ref|ZP_04398126.1| ATP synthase alpha chain [Vibrio cholerae B33]
 gi|229515967|ref|ZP_04405424.1| ATP synthase alpha chain [Vibrio cholerae TMA 21]
 gi|229517153|ref|ZP_04406599.1| ATP synthase alpha chain [Vibrio cholerae RC9]
 gi|229520155|ref|ZP_04409582.1| ATP synthase alpha chain [Vibrio cholerae TM 11079-80]
 gi|229524895|ref|ZP_04414300.1| ATP synthase alpha chain [Vibrio cholerae bv. albensis VL426]
 gi|229530222|ref|ZP_04419611.1| ATP synthase alpha chain [Vibrio cholerae 12129(1)]
 gi|229606553|ref|YP_002877201.1| F0F1 ATP synthase subunit alpha [Vibrio cholerae MJ-1236]
 gi|254226934|ref|ZP_04920500.1| ATP synthase F1, alpha subunit [Vibrio cholerae V51]
 gi|254291146|ref|ZP_04961943.1| ATP synthase F1, alpha subunit [Vibrio cholerae AM-19226]
 gi|254851557|ref|ZP_05240907.1| ATP synthase F1 [Vibrio cholerae MO10]
 gi|262155904|ref|ZP_06029026.1| ATP synthase alpha chain [Vibrio cholerae INDRE 91/1]
 gi|262190639|ref|ZP_06048874.1| ATP synthase alpha chain [Vibrio cholerae CT 5369-93]
 gi|9657367|gb|AAF95905.1| ATP synthase F1, alpha subunit [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121628658|gb|EAX61130.1| ATP synthase F1, alpha subunit [Vibrio cholerae V52]
 gi|125620539|gb|EAZ48907.1| ATP synthase F1, alpha subunit [Vibrio cholerae V51]
 gi|149738914|gb|EDM53238.1| ATP synthase F1, alpha subunit [Vibrio cholerae MZO-2]
 gi|150422991|gb|EDN14941.1| ATP synthase F1, alpha subunit [Vibrio cholerae AM-19226]
 gi|227010766|gb|ACP06978.1| ATP synthase F1, alpha subunit [Vibrio cholerae M66-2]
 gi|227012006|gb|ACP08216.1| ATP synthase F1, alpha subunit [Vibrio cholerae O395]
 gi|229332355|gb|EEN97842.1| ATP synthase alpha chain [Vibrio cholerae 12129(1)]
 gi|229338476|gb|EEO03493.1| ATP synthase alpha chain [Vibrio cholerae bv. albensis VL426]
 gi|229342749|gb|EEO07740.1| ATP synthase alpha chain [Vibrio cholerae TM 11079-80]
 gi|229346216|gb|EEO11188.1| ATP synthase alpha chain [Vibrio cholerae RC9]
 gi|229347067|gb|EEO12029.1| ATP synthase alpha chain [Vibrio cholerae TMA 21]
 gi|229354345|gb|EEO19273.1| ATP synthase alpha chain [Vibrio cholerae B33]
 gi|229354552|gb|EEO19474.1| ATP synthase alpha chain [Vibrio cholerae BX 330286]
 gi|229369208|gb|ACQ59631.1| ATP synthase alpha chain [Vibrio cholerae MJ-1236]
 gi|254847262|gb|EET25676.1| ATP synthase F1 [Vibrio cholerae MO10]
 gi|262030356|gb|EEY48998.1| ATP synthase alpha chain [Vibrio cholerae INDRE 91/1]
 gi|262033477|gb|EEY51980.1| ATP synthase alpha chain [Vibrio cholerae CT 5369-93]
          Length = 523

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 67

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 68  -NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G    +  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 127 GKGPIG-AKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 186 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|261250657|ref|ZP_05943232.1| ATP synthase alpha chain [Vibrio orientalis CIP 102891]
 gi|260939226|gb|EEX95213.1| ATP synthase alpha chain [Vibrio orientalis CIP 102891]
          Length = 513

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 187/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  +     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQRNSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSQEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|34539273|gb|AAQ74520.1| F1-ATPase alpha subunit [Dianella caerulea]
          Length = 418

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVDVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ ++   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVNSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|34539289|gb|AAQ74528.1| F1-ATPase alpha subunit [Epidryos allenii]
          Length = 418

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     D L+ S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEADALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|164685640|gb|ABY66766.1| atp1 [Rhus glabra]
          Length = 413

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|6561640|gb|AAF16984.1|AF197652_1 ATPase alpha subunit [Persoonia katerae]
          Length = 419

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 167/411 (40%), Gaps = 23/411 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 403


>gi|331005450|ref|ZP_08328829.1| flagellum-specific ATP synthase [gamma proteobacterium IMCC1989]
 gi|330420726|gb|EGG95013.1| flagellum-specific ATP synthase [gamma proteobacterium IMCC1989]
          Length = 434

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 162/423 (38%), Positives = 237/423 (56%), Gaps = 9/423 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPV 75
           + +   G +     +   V  L  +V  G++       ++     +VI IN + V + P 
Sbjct: 12  DYIRSSGKVCDCAGLVVKVAGLEAFV--GEYCEIYSSAQSEPIAAEVIGINANKVLLMPY 69

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    +S+G  V   GR   +       GRV++A G P+D D           +  K   
Sbjct: 70  GHTSGVSVGSDVVATGRKVEMPVGDNMLGRVLDAFGNPLD-DQPKPVASAHYPLYKKPIN 128

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +NR  +++   TG++ ID    +  GQR+G+FAGSG+GKSTLL M A+    D  +I+L
Sbjct: 129 PLNRPPIKEILHTGVKAIDSLITVGRGQRLGIFAGSGVGKSTLLGMIAKGLDCDVNVIAL 188

Query: 195 VGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREV +FI   LG+  LKKSVV+ ATSDE+ ++R  A   A  IAEYF  +G  V+
Sbjct: 189 VGERGREVSDFIYKVLGEEGLKKSVVIAATSDENALVRSHAAWGATAIAEYFRDQGKKVI 248

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +DS+TR A + REI  + GE P  +GY  SVFS LPRLLER G + K  G+ITA  +V
Sbjct: 249 LTMDSVTRLAMAQREIGLSVGEPPTTKGYTPSVFSVLPRLLERAG-TSKNGGSITAFYTV 307

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+ N+P++D VRSILDG I L+R+LA++  +P +D L S SRL +      E   +
Sbjct: 308 LVEGDDTNEPVSDHVRSILDGTITLSRALAQKRHFPSIDILQSNSRLINDLVDQKEYLQI 367

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQE 432
                ++  +E  R++  +G Y  G +  LDK + ++  I  FL+Q P D  + E+  + 
Sbjct: 368 RQFVEMLELYERYREMVDMGIYNHGTNPKLDKVLGKLEDIQKFLQQEPKDSFTREESLKN 427

Query: 433 ITK 435
           ITK
Sbjct: 428 ITK 430


>gi|330818625|ref|YP_004362330.1| Flagellum-specific ATP synthase FliI [Burkholderia gladioli BSR3]
 gi|327371018|gb|AEA62374.1| Flagellum-specific ATP synthase FliI [Burkholderia gladioli BSR3]
          Length = 476

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 153/441 (34%), Positives = 230/441 (52%), Gaps = 19/441 (4%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL---- 59
           LE L  L E  ++ L +   G ++    +    T L   + +G     +      L    
Sbjct: 25  LEQLGALRERSARALPLRPCGRLTRAAGLVLEATGL--RLSVGAECTIELPPGSTLPVAE 82

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF----------RISPSACWCGRVINAL 109
            +V+    + +++ P      +  G  V+   R           R+       GRV++A 
Sbjct: 83  AEVVGFAGERLFLMPTTEVAGVLPGARVWPLERAPIADPLAGAKRLPVGWQMLGRVVDAS 142

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    L   +L   + +     + R+ +      G+R I+    +  GQR+G+FAG
Sbjct: 143 GRPLDRLGPL-ASELDAPLSAPTINPLEREPIHHVLDVGVRAINALLTVGRGQRMGLFAG 201

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESP 228
           SG+GKS LL   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP
Sbjct: 202 SGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSP 261

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +LR      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF+
Sbjct: 262 LLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFA 321

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G Y
Sbjct: 322 KLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAEAGHY 381

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D   S+SR             V     ++ R++  RD+  +G Y  G D  LD+A+ 
Sbjct: 382 PAIDIEQSISRAMTSLIDERHLDRVRRFKQMLSRYQRNRDLIAVGAYAAGRDAQLDRAIA 441

Query: 409 QVPIIYDFLKQSPSDLSSEDV 429
             P I  FL+Q   + +  + 
Sbjct: 442 LYPRIEAFLQQGFRECAPFES 462


>gi|6561673|gb|AAF17017.1|AF197685_1 ATPase alpha subunit [Palmeria scandens]
 gi|6561675|gb|AAF17019.1|AF197687_1 ATPase alpha subunit [Siparuna decipiens]
          Length = 418

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 169/414 (40%), Gaps = 23/414 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           ++  S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 406


>gi|34539439|gb|AAQ74603.1| F1-ATPase alpha subunit [Spathanthus bicolor]
          Length = 417

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|238794013|ref|ZP_04637631.1| Flagellum-specific ATP synthase [Yersinia intermedia ATCC 29909]
 gi|238726645|gb|EEQ18181.1| Flagellum-specific ATP synthase [Yersinia intermedia ATCC 29909]
          Length = 454

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 159/446 (35%), Positives = 242/446 (54%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L +L +  E  S++  + + G ++  T +    T L   + LG   + +    G   +  
Sbjct: 9   LASLDKFEERISQSTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDNGTVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+     G      ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARVTTGGASASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +  +      +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPA-PETSYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDENHYSQVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + SS +   +  K L
Sbjct: 426 QMEIFLQQGMFERSSYEDACQHLKSL 451


>gi|3273588|gb|AAC24776.1| F1-ATPase alpha subunit [Xanthorrhoea australis]
          Length = 421

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    R LER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRXLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|27461571|gb|AAM95202.1| ATPase F1 alpha subunit [Schoenocephalium cucullatum]
 gi|27461617|gb|AAM95225.1| ATPase F1 alpha subunit [Stegolepis parvipetala]
 gi|34539347|gb|AAQ74557.1| F1-ATPase alpha subunit [Kunhardtia radiata]
          Length = 417

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|28899845|ref|NP_799450.1| F0F1 ATP synthase subunit alpha [Vibrio parahaemolyticus RIMD
           2210633]
 gi|81726597|sp|Q87KA6|ATPA_VIBPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|28808097|dbj|BAC61334.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 523

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 189/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 68

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 69  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 127 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 186 TAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|260774526|ref|ZP_05883439.1| ATP synthase alpha chain [Vibrio metschnikovii CIP 69.14]
 gi|260610432|gb|EEX35638.1| ATP synthase alpha chain [Vibrio metschnikovii CIP 69.14]
          Length = 513

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 189/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++++     +           G I S++     +  L+  V  G+ +   G N
Sbjct: 1   MQLNSTEISEIIRKRIEGFNVVSDARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGGN 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++S G  V   GR   +       GRV+N LG PID
Sbjct: 60  ---FALALNLERDSVGAVVMGPYTDLSEGMKVTSTGRILEVPVGPELLGRVVNTLGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + D     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEVYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAAYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + ++    + + +KQ     +   VF +  
Sbjct: 413 LDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|312171089|emb|CBX79348.1| ATP synthase in type III secretion system [Erwinia amylovora ATCC
           BAA-2158]
          Length = 454

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 153/450 (34%), Positives = 244/450 (54%), Gaps = 20/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GK 54
           M    + L Q A+ + + L     V + G ++ I+ +   + C+     +GD    Q   
Sbjct: 3   MSALQQRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSD 60

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
               L +++  + + + +  +G  + IS G  +        I  S    G V++  G+ +
Sbjct: 61  GGSVLSEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRAL 120

Query: 114 DGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +          G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FA
Sbjct: 121 EPGGHSAFAEPGTRVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFA 180

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   ++V++ ATSD S
Sbjct: 181 GAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRS 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV+
Sbjct: 241 SMERARAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVY 300

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   
Sbjct: 301 TLLPRLVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNH 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR                L  L+  +++   +  +G Y+PG D + D AV
Sbjct: 359 YPAIDVLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAV 418

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   II  FL+QS   + + D F++   +L
Sbjct: 419 NANDIINQFLRQS---MRAPDPFEQTQYQL 445


>gi|164685572|gb|ABY66732.1| atp1 [Betula nigra]
          Length = 413

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|90577384|ref|ZP_01233195.1| putative flagellum-specific ATP synthase [Vibrio angustum S14]
 gi|90440470|gb|EAS65650.1| putative flagellum-specific ATP synthase [Vibrio angustum S14]
          Length = 449

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 155/431 (35%), Positives = 238/431 (55%), Gaps = 6/431 (1%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-G 60
           +   ++L  LA   S  +    G +  +  +      +     L    +    + + +  
Sbjct: 3   RLQADSLTALAALDSVPIARVTGRLVKVNGLMLQ--AVGCRFKLDQRCLIVADDGEQIEA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + +I Y+ PV     +  G  V    G   ++ S  W GRV+N LG+P+D    L
Sbjct: 61  QVVGFDHNIAYLMPVRQLGGLYAGAKVIPMQGGSTVNVSHKWIGRVVNGLGEPLDNGSPL 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+ S+ +  K    M RQ VE     GI+ I+    +  GQRIG+ AGSG+GKS L+ 
Sbjct: 121 QGGE-SLSLEPKPINPMKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLMG 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M  +    D +++ L+GERGREVREFI  +   +  K++V++ A +DESP++R  A    
Sbjct: 180 MITKYTAADIIVVGLIGERGREVREFIERNLGEEGRKRAVIIAAPADESPLMRLRATKLC 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G
Sbjct: 240 HRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+ +VL +GD+  DP+ DS R+ILDGHIVL+R+LAE+G YP +D  AS+S
Sbjct: 300 NGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASIS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R            + +    L   +++ +++  +GGY+ G D  LD+AV   P +  FL+
Sbjct: 360 RCMSSCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFLQ 419

Query: 419 QSPSDLSSEDV 429
           Q  ++      
Sbjct: 420 QPVTEHCDYQA 430


>gi|6561605|gb|AAF16949.1|AF197617_1 ATPase alpha subunit [Gnetum gnemon]
          Length = 418

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 172/409 (42%), Gaps = 26/409 (6%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V+ L++ +  G+ V     +S   G  + +  + V I   G    I  G +V   
Sbjct: 1   DGIARVSGLNK-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIIEGSIVKRT 56

Query: 91  GRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G    +       GRV++ALG P+DG  ++ +  L   + +K P  + R+ V +  +TG 
Sbjct: 57  GSIVSVPVGKAMLGRVVDALGVPLDGLGNVSEHSLRR-VEAKAPGIIERKSVHEPMQTGY 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLL--------------SMFARSDCFDKVIISLV 195
           + +D   P+  GQR  +      GK+ +               +  A S      +   +
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRTFISANKGADSAKVLYCVYVAI 175

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++       L+ S+VV AT+ +S  L+ +AP +   + EYF   G + ++
Sbjct: 176 GQKRSTVAQLVQILSETSALEYSIVVAATASDSAPLQFLAPYSGCAMGEYFRDNGMHAVI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPI 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      + +   + + LKQ  
Sbjct: 356 CGSFKLELAQYRE---VAAFAQFGSDLDAATQALLQRGARLTEVLKQPQ 401


>gi|20146614|gb|AAM12461.1| ATP synthase alpha subunit [Shortia soldanelloides]
          Length = 393

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 91/401 (22%), Positives = 164/401 (40%), Gaps = 23/401 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG   LG  +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGPLGDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N    S++  AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVKILSEANAMEYSILEAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            K++  S    + ++ E   +  +  +   +D      +++
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNR 393


>gi|86149592|ref|ZP_01067822.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88597163|ref|ZP_01100398.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|148926360|ref|ZP_01810044.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|218561874|ref|YP_002343653.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|85839860|gb|EAQ57119.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190224|gb|EAQ94198.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359580|emb|CAL34364.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145844752|gb|EDK21857.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|284925487|gb|ADC27839.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928127|gb|EFV07445.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 461

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 163/436 (37%), Positives = 239/436 (54%), Gaps = 6/436 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV 62
           NLE L        +NL    G I+ I++    +  L   V  +   V ++ +N + L  V
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++ +
Sbjct: 60  VEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI-E 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 ATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+++
Sbjct: 179 VKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSV 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E
Sbjct: 239 AEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEE 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 299 G-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P
Sbjct: 358 SDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+  ++
Sbjct: 418 EESFEFNQTLELLSQI 433


>gi|157738148|ref|YP_001490832.1| flagellum-specific ATP synthase [Arcobacter butzleri RM4018]
 gi|315636291|ref|ZP_07891541.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri JV22]
 gi|157700002|gb|ABV68162.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri RM4018]
 gi|315479380|gb|EFU70063.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri JV22]
          Length = 435

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 179/439 (40%), Positives = 255/439 (58%), Gaps = 10/439 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQ 61
           N+E L  L +  S +L +  G I++I+++  T   L   V +GD V  + +      LG 
Sbjct: 3   NIEEL--LNKIDSASLPIAFGRITNISAITLTAIGLE--VAVGDIVRIESEQRLYSVLGM 58

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLG 120
           V  IN     I P    E   + D VF       +       GRV+NALG+PID    + 
Sbjct: 59  VTTINDSSFIIVPFSFIEGFKINDKVFLQRDGLTVKCGNGLLGRVVNALGEPIDNKGKIR 118

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             D +  I       + R  +++ F TG++ ID       GQ++G+FAGSG+GKSTL+ M
Sbjct: 119 DLDENSAINKISMSPLERGIIDQKFSTGVKAIDSMLTCGKGQKVGIFAGSGVGKSTLMGM 178

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             +       +++LVGERGRE+ EFI   L D+L+ +V+V ATSDES ++RK    TA++
Sbjct: 179 IVKGCEAQVKVVALVGERGREIPEFIHYNLNDDLENTVIVAATSDESALMRKYGAFTAMS 238

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  KG +VLL++DS+TRFA + REI  ++GE PV+RGYP SVF+ LP+L+ER G +
Sbjct: 239 IAEYFRDKGLDVLLMMDSVTRFAMAQREIGLSTGEPPVSRGYPPSVFALLPQLMERAGNN 298

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +K  G+ITA  +VLVDGD+ NDPIAD  RSILDGHIVL R L E+G YPP++ L S SR+
Sbjct: 299 QK--GSITAFFTVLVDGDDMNDPIADQSRSILDGHIVLTRELTEQGFYPPINLLKSASRV 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            DK  + +       L  ++   +E   +  +G Y+ G+D  LD A+ +   I +FL QS
Sbjct: 357 MDKVVTKEHYNDFLKLKRVLSLIKENEVLVRVGAYKKGMDPELDNAMARKERIREFLTQS 416

Query: 421 PSDLSSED-VFQEITKKLQ 438
             +  S D +     K LQ
Sbjct: 417 TQENVSFDEIITNFRKVLQ 435


>gi|34539197|gb|AAQ74482.1| F1-ATPase alpha subunit [Aristolochia gigantea]
          Length = 416

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 91/411 (22%), Positives = 167/411 (40%), Gaps = 23/411 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD V 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDPVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 403


>gi|34539397|gb|AAQ74582.1| F1-ATPase alpha subunit [Pandanus copelandii]
          Length = 416

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G       GDLV
Sbjct: 2   SVGDGIARVYGLNE-IXAGEMVEFA---SGVKGIXLNLENENVGIVVFGSDTXXKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV+BALG PIDG  +L        +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVBALGVPIDGRGALSDH-XRRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFQAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 SLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|283834468|ref|ZP_06354209.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
 gi|291070015|gb|EFE08124.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC
           29220]
          Length = 446

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 149/425 (35%), Positives = 227/425 (53%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRVNGILL--ESVGCPLVTGQLCRVESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   + + I  S  W GRV+N LG+ +D    L   D+ +   +   
Sbjct: 74  FKHPVGLMAGARVFPEEKAQEILISESWLGRVVNGLGESLDAKGRLTGNDV-LPPQAPSI 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V +    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVNQPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + L KS++V A +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGAEGLAKSIIVAAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE  +G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-EGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR   +    + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMTQVTPYEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              L      + E + +  +GGY  G D  +DKAV   P I  FL+Q  S+ +S ++ Q 
Sbjct: 372 ARLLKQNYAAYMEIKPLIPLGGYVAGADPSVDKAVKVFPAIERFLRQEVSEPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQAL 436


>gi|1381687|gb|AAB02742.1| F1-ATPase alpha subunit [Nypa fruticans]
          Length = 425

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 94/413 (22%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 3   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 58

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 59  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGIGALSDHE-RRRVEVKAPGIIERKSVH 117

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 118 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSSSETLYCV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYFS  G 
Sbjct: 178 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFSDNGM 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 238 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAXKRSDQTGAGSST 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 298 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRA 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 358 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 407


>gi|317050176|ref|YP_004117824.1| ATP synthase F1 subunit alpha [Pantoea sp. At-9b]
 gi|316951793|gb|ADU71268.1| ATP synthase F1, alpha subunit [Pantoea sp. At-9b]
          Length = 513

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPVEVIAPGVIDRQSVDEPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVTADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|34539271|gb|AAQ74519.1| F1-ATPase alpha subunit [Cypripedium calceolus]
          Length = 416

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 167/408 (40%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER     ++   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|225569976|ref|ZP_03779001.1| hypothetical protein CLOHYLEM_06071 [Clostridium hylemonae DSM
           15053]
 gi|225161446|gb|EEG74065.1| hypothetical protein CLOHYLEM_06071 [Clostridium hylemonae DSM
           15053]
          Length = 435

 Score =  295 bits (756), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 164/441 (37%), Positives = 248/441 (56%), Gaps = 14/441 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDN 58
           M K+L  +   AE      +   G I +IT +    +       +GD V+   + +    
Sbjct: 1   MLKDLPGMIMKAE-----TINHIGKIENITGMSMEASG--GSANIGDIVLIYNEEQKKQI 53

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
             +V+    + + +        I     V     R +I       GR+I+ALG PID   
Sbjct: 54  PAEVVGFRGEKIQLMAYENMPGIGTDSFVRSTKKRLKIPVGQFLRGRIIDALGNPIDDKG 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
              + +    + S     ++R  + +    G++ ID    +  GQRIG+FAGSG+GKSTL
Sbjct: 114 PF-ESERYYYVESPKINPLSRPPISEELHFGVKAIDGLNTIGKGQRIGIFAGSGVGKSTL 172

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR+   D  +I+LVGERGREVREF+ +D   + +K+SV+VVATSD+  +LR   P+
Sbjct: 173 LGMIARNVETDINVIALVGERGREVREFVEKDLGPEGMKRSVLVVATSDQPAMLRMKCPI 232

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A TIAEYF  +G +VLL++DS+TRFA + REI   +GE PVARGY  S+++E P+LLER
Sbjct: 233 VATTIAEYFKDQGKDVLLMMDSLTRFAMAQREIGLATGEPPVARGYTPSIYAEFPKLLER 292

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  E   G+IT V +VLV+GD+ N+P+AD+VR ILDGHIVL+R LA    +P +D  AS
Sbjct: 293 SGKFEN--GSITGVYTVLVEGDDTNEPVADTVRGILDGHIVLSRKLANANHFPAIDVSAS 350

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SRL     + + ++L S L  ++  +E+  D+  IG Y+ G +  LD A+ ++  +  F
Sbjct: 351 ISRLMTDIVTEEHRELASKLRDILSVYEQNEDLISIGAYKSGTNEKLDHAISKIEQVNRF 410

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L Q       +D   ++ +K+
Sbjct: 411 LMQEIDRKYEKDEMLDVMRKI 431


>gi|20146580|gb|AAM12444.1| ATP synthase alpha subunit [Heliamphora sp. Anderberg s.n.]
          Length = 397

 Score =  295 bits (756), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 166/405 (40%), Gaps = 23/405 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + ++      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVAVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            K++  S    + ++ E   +     +   +D      + +   +
Sbjct: 356 MKQVCGSSNLELAQYRE---VAAFAQFGSDLDAATQALLXRGARL 397


>gi|261213281|ref|ZP_05927563.1| ATP synthase alpha chain [Vibrio sp. RC341]
 gi|260837555|gb|EEX64258.1| ATP synthase alpha chain [Vibrio sp. RC341]
          Length = 513

 Score =  295 bits (756), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G   L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPIG-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|172040394|ref|YP_001800108.1| F0F1 ATP synthase subunit alpha [Corynebacterium urealyticum DSM
           7109]
 gi|226739863|sp|B1VFY5|ATPA_CORU7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|171851698|emb|CAQ04674.1| ATP synthase alpha chain [Corynebacterium urealyticum DSM 7109]
          Length = 545

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 103/438 (23%), Positives = 184/438 (42%), Gaps = 23/438 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +A     YS     +  G +++       V+ +   V   + +   G     +G    
Sbjct: 13  SAIANYTSSYSPEASREEVGVVTTAADGIANVSGM-PSVMANELLEFPGG---VIGVAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +   +
Sbjct: 69  LDTDSVGVVVLGNYETLKEGDEVKRTGEVLSIPVGENFLGRVINPLGEPIDGLGDITDTE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 129 -ERALELQAPSVLMRQPVNEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTSVCIDTIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +     +  D     + I   +G++G  +    +        + + +V A + +S   + 
Sbjct: 188 NQRDNWESGDPSKQVRCIYVAIGQKGSTIASIRQTLEEHGALEYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPFAGAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +    ++ +  I  +V SI DG + L   L  +G  P 
Sbjct: 308 LLERAAKLNDELGGGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A +   KK+  +L   +  +   RD+     +   +D      + + 
Sbjct: 368 INVGVSVSRVGGDAQTKGMKKVSGNLRLDLAAY---RDLEAFSAFASDLDDASKAQLERG 424

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ+     S +
Sbjct: 425 ERLVELLKQTEHAPQSVE 442


>gi|292900595|ref|YP_003539964.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
 gi|1181169|gb|AAB06001.1| HrcN [Erwinia amylovora]
 gi|291200443|emb|CBJ47572.1| type III secretion system protein [Erwinia amylovora ATCC 49946]
          Length = 454

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 153/450 (34%), Positives = 244/450 (54%), Gaps = 20/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GK 54
           M    + L Q A+ + + L     V + G ++ I+ +   + C+     +GD    Q   
Sbjct: 3   MSALQQRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSD 60

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
               L +++  + + + +  +G  + IS G  +        I  S    G V++  G+ +
Sbjct: 61  GGSVLSEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRAL 120

Query: 114 DGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +          G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FA
Sbjct: 121 EPGGHSAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFA 180

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   ++V++ ATSD S
Sbjct: 181 GAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRS 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV+
Sbjct: 241 SMERARAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVY 300

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   
Sbjct: 301 TLLPRLVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNH 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR                L  L+  +++   +  +G Y+PG D + D AV
Sbjct: 359 YPAIDVLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAV 418

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   II  FL+QS   + + D F++   +L
Sbjct: 419 NANDIINRFLRQS---MRAPDPFEQTQYQL 445


>gi|37524074|ref|NP_927418.1| F0F1 ATP synthase subunit alpha [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81572786|sp|Q7NA92|ATPA_PHOLL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|36783497|emb|CAE12337.1| ATP synthase alpha chain [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 513

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVNDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-EHDGFSAVEMIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   VG++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|152986739|ref|YP_001349621.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PA7]
 gi|150961897|gb|ABR83922.1| flagellar protein export ATPase FliI [Pseudomonas aeruginosa PA7]
          Length = 451

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 154/439 (35%), Positives = 236/439 (53%), Gaps = 18/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+    + A+  E Y+  +      V  G +  +  +      L     +G       ++
Sbjct: 1   MRLERTSFARRLEGYTNAVSLPAQPVVEGRLLRMVGLTLEAEGL--QAAVGSRCNVINES 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINA 108
                    +V+  +   VY+ PVG    I+ G  V      GR          GRV++ 
Sbjct: 59  GYHPVQVEAEVMGFSGSKVYLMPVGSLAGIAPGARVVPLPDTGRL--PMGMSMLGRVLDG 116

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
            G+ +DG   +   D  + +       + R  + +    GIR I+    +  GQR+G+FA
Sbjct: 117 AGRALDGKGGMRAEDW-VPMDGPTINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFA 175

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDES 227
           G+G+GKS LL M  R    D +++ L+GERGREV+EFI++ LG+  LK+SVVV + +D++
Sbjct: 176 GTGVGKSVLLGMMTRFTRADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDA 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R  A      IAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF
Sbjct: 236 PLMRLRAAQYCTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVF 295

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++LP+L+ER G +E   G+ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG 
Sbjct: 296 AKLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGH 355

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  AS+SR+  +       +       L  R++++RD+  +G Y  G D   D A+
Sbjct: 356 YPAIDIEASISRVMPQVVEPGHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDAETDLAI 415

Query: 408 HQVPIIYDFLKQSPSDLSS 426
            + P +  FL+Q+  +  S
Sbjct: 416 ARFPAMRQFLRQALDESES 434


>gi|295678028|ref|YP_003606552.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1002]
 gi|295437871|gb|ADG17041.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1002]
          Length = 546

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 154/444 (34%), Positives = 237/444 (53%), Gaps = 18/444 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIR 64
           A  A +     +   G ++    +      L   + +G  V+ +     +L     +V+ 
Sbjct: 99  ALRARNAIAKPLRACGRLTRAAGLVLEAVGL--RLSVGAEVMIELPPGSSLPMAEAEVVG 156

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPID 114
            + D +++ P      +  G  VF            G  R+       GRV++A G+P+D
Sbjct: 157 FSGDKLFLMPTTEVIGLLPGARVFPLESAPIADPLAGAKRLPVGWELLGRVLDASGRPLD 216

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   LG       + + V   +NR+ + K    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 217 GLGPLG-TQTDAPLSAPVINPLNREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGK 275

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKM 233
           S LL   AR    + ++I L+GERGREV+EFI +    + L +SVV+ A +D SP+LR  
Sbjct: 276 SVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQ 335

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           A   + ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L
Sbjct: 336 AAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPAL 395

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D 
Sbjct: 396 VERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDI 455

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR        +          ++ R++  RD+  +G Y  G D +LD+A+   P +
Sbjct: 456 EASISRAMTALIDDNHLNKTRMFKQMLSRYQRNRDLINVGAYSAGRDALLDRAIALYPRM 515

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL+Q   + ++     ++   L
Sbjct: 516 EAFLQQGFRECANFQPSIDMLNAL 539


>gi|256372560|ref|YP_003110384.1| ATP synthase F1, alpha subunit [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009144|gb|ACU54711.1| ATP synthase F1, alpha subunit [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 504

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 99/411 (24%), Positives = 174/411 (42%), Gaps = 14/411 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  +      V+ L   V + + +  +      +G  + ++ + +    +G  E I  
Sbjct: 32  GRVLQLFDGIALVSGL-PSVAVNEMLRFEDG---TVGLALNLDEEAIGAVILGDQEGIRE 87

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V   G    +       GRVI+ LG+P+DG   +    LS  +  + P    RQ V 
Sbjct: 88  GQIVRSTGEILSVPVGDELLGRVIDPLGRPLDGLGPIAAS-LSRRLEVQAPGITKRQPVN 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD--CFDKVIISLVGERGR 200
           +  +TGI+ ID   P+  GQR  +      GK+++      +      K I   VG++G 
Sbjct: 147 QPLQTGIKAIDTLVPIGRGQRELIIGDRKTGKTSIALDAIINQRGQGVKCIYVAVGQKGT 206

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V   +E          +VVV A + E    + +AP     I +++   GD+ L++ D +
Sbjct: 207 SVASVVETLRAAGALAYTVVVSAPASEPAPFKYLAPYAGCAIGQHWMESGDDALIVYDDL 266

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    YP  +F    RLLER      E   G++TA+  +    
Sbjct: 267 SKQADAYRQLSLLLRRPPGREAYPGDIFYLHSRLLERAARLSPELGGGSLTALPIIETKA 326

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L+  L   G  P +D  ASVSR+   A +   K++  SL 
Sbjct: 327 GDISAYIPTNVISITDGQIFLDADLFYSGVRPAIDVGASVSRVGGSAQTKAMKEVAGSLR 386

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             + +F E         +   +D +    + +   + + LKQ      S +
Sbjct: 387 LELAQFRELE---AFATFGSELDKVAQAQLDRGYRLTEILKQPQGQPVSLE 434


>gi|253987521|ref|YP_003038877.1| F0F1 ATP synthase subunit alpha [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253778971|emb|CAQ82131.1| ATP synthase subunit alpha [Photorhabdus asymbiotica]
          Length = 513

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S+      +  L++ V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVNDGIIRIHGLAE-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPV-EHDGFSAVEMIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   VG++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESSLFNAGIRPAVNPGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|60099313|emb|CAD70261.1| ATPase alpha subunit [Psilotum nudum]
          Length = 412

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 163/409 (39%), Gaps = 24/409 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V   S  +  G+ V      S   G  + +  + V I   G    I  GD+V  
Sbjct: 1   GDGIARVYG-SNKIKAGEMVEFA---SGVKGMALNLENEDVGIVLFGSDTAIKEGDMVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPIDGKGALSAVE-RRRVEVKAPGIIARKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------------VIISLVG 196
           ++ +D   P+  GQR  +      GK+ +      +                  +   +G
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKPINLAQGTSDSERLFCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++        + S+VV AT+ +    + +AP +   + E+F   G + L+I
Sbjct: 176 QKRSTVAQLVKIPSEAGALEYSIVVAATASDPAPPQFLAPYSGCAMGEFFRDHGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ + + R+++      P    +P  V     RL ER      +   G++TA+  +
Sbjct: 236 YDDLSKQSVAYRQMSLLLRRPPGREAFPGDVSYLHSRLSERAAKRSDQTGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K L 
Sbjct: 296 ETQAGDVSAYIPTNVISITDGQIFLETELFYRGVRPAINVGLSVSRVGSAAQLKPMKALC 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            +L   + ++ E   +     +   +D      +H+   + + LKQS  
Sbjct: 356 GTLKLDLAQYRE---VAAFAQFGSDLDTATQYLLHRGARLTEILKQSQF 401


>gi|77918793|ref|YP_356608.1| flagellum-specific ATP synthase FliI [Pelobacter carbinolicus DSM
           2380]
 gi|77544876|gb|ABA88438.1| type III secretion system ATPase, FliI/YscN [Pelobacter
           carbinolicus DSM 2380]
          Length = 433

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 159/423 (37%), Positives = 233/423 (55%), Gaps = 8/423 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           +   G I+ I  +   V        +G     + +   +    +V+        + P+G 
Sbjct: 14  IQVSGKITQIVGLV--VEGYCPAATVGTLCELMPRDGGTPVPAEVVGFRDSRALLMPLGE 71

Query: 78  GEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              +  G  +        +       GRVI+A+G+PID D  L   +  M + +     M
Sbjct: 72  LRGLGPGSRIRVVSNSATLPVGRELLGRVIDAMGQPID-DGPLPVRETDMPLYALPAGPM 130

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  ++     GIR I+       GQR+G+ AGSG+GKSTLL M A++   D  +I+L+G
Sbjct: 131 ERDTIDTPLDLGIRAINGLLTCGQGQRMGIMAGSGVGKSTLLGMIAQNTQADVNVIALIG 190

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREFI  D   + L +SVV+VATSD+SP+LR      A T+AEYFSS+G NVLL+
Sbjct: 191 ERGREVREFIERDLGPEGLARSVVIVATSDQSPLLRMRGAFVATTVAEYFSSQGLNVLLM 250

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G S +  G+IT + +VLV
Sbjct: 251 MDSVTRFAMAMREVGLAIGEPPTTKGYTPSVFATLPKLLERAG-SFRNSGSITGLYTVLV 309

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+PIAD+VRSILDGHIVL+R LA +  YP +D L S SR+ +       + L   
Sbjct: 310 EGDDMNEPIADAVRSILDGHIVLSRRLAAKNHYPCIDILHSASRVMNAVVDPGHQDLAGR 369

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  ++  +EE  D+  IG Y+ G +  +D A+  +  +  FL+Q  S+        +   
Sbjct: 370 LREILATYEEAEDLINIGAYKKGSNPKIDTALSHIDNVLRFLRQRVSEAVDLSTTLDQLN 429

Query: 436 KLQ 438
            LQ
Sbjct: 430 DLQ 432


>gi|57868902|gb|AAW57447.1| ATP synthase alpha subunit [Cleyera japonica]
          Length = 398

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 90/406 (22%), Positives = 166/406 (40%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFV---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ LG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKTM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 KQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 398


>gi|34539389|gb|AAQ74578.1| F1-ATPase alpha subunit [Nymphaea odorata]
          Length = 416

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 169/414 (40%), Gaps = 25/414 (6%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-------------VIIS 193
           TG++ +D   P+  GQR  +      GK+ +      +                   +  
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQIHSRKGISSESETLYCVYV 176

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 177 AIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 236

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 237 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K
Sbjct: 297 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMK 356

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           ++  S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 357 QVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 407


>gi|284794747|ref|YP_003412100.1| ATP synthase F1 subunit alpha [Phaeoceros laevis]
 gi|254596067|gb|ACT75308.1| ATP synthase F1 subunit alpha [Phaeoceros laevis]
          Length = 513

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 93/428 (21%), Positives = 173/428 (40%), Gaps = 24/428 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V  L++ +  G+ V      S   G  + + 
Sbjct: 13  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNK-IQAGEMVEFA---SGVKGMALNLE 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +LG  +  
Sbjct: 69  KENVGIVVFGSDTAIKEGDIVRRTGSIVDVPVGKAILGRVVDALGVPIDGKGALGAVE-R 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----------- 174
             +  K P  + R+ V +  +TG++ +D   P   GQR  +      GK           
Sbjct: 128 RRVEVKAPGIIARKSVHELMQTGLKAVDSLVPTGRGQREFIIGDRQTGKTAVAIDTISNQ 187

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
             + +    +      +   +G++   V + ++        +  +++ A+  +   L+ +
Sbjct: 188 KEINAQGTSNSDKLYCVYVAIGQKRSTVAQLVKILSEAGALEYCIILAASVLDHVPLQFL 247

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF   G + L+I D +++     R+++      P    +P  VF    RL
Sbjct: 248 APYSGCAMGEYFRDNGMHALIIYDDLSKQVVVYRQMSLLLRRPPGCEAFPGDVFYLHSRL 307

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      +   G++TA+  +     + +  I  +V SI DG I L   L   G    +
Sbjct: 308 LERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRLAI 367

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVS +   A     K++  SL   + ++ E   +     +   +D  +   +++  
Sbjct: 368 NVGLSVSCVGFAAQLKAMKQVCGSLKLELAQYRE---VAASAQFGSDLDAAIKYLLNRGA 424

Query: 412 IIYDFLKQ 419
            + +  KQ
Sbjct: 425 RLTEVSKQ 432


>gi|164685662|gb|ABY66777.1| atp1 [Staphylea trifolia]
          Length = 413

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|120556781|ref|YP_961132.1| F0F1 ATP synthase subunit alpha [Marinobacter aquaeolei VT8]
 gi|158513054|sp|A1U7H6|ATPA_MARAV RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120326630|gb|ABM20945.1| ATP synthase F1, alpha subunit [Marinobacter aquaeolei VT8]
          Length = 514

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 98/442 (22%), Positives = 187/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ + +   + L         G I S++     +  L+  V  G+ +       
Sbjct: 3   QLNPSEISDIIKKRIEKLDISSEAKNEGTILSVSDGIVLIHGLAD-VMYGEMIEFANG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  E ++ G  V   GR   +       GRV+++LG PIDG
Sbjct: 60  -TYGMALNLERDSVGAVVLGDYEGLAEGQKVRCTGRILEVPVGNELLGRVVDSLGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG   L+  +    P  + RQ V++  +TG++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGELGNS-LTSPVEKVAPGVIARQSVDEPVQTGLKAIDTMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++  +     K I   VG++   +   +           ++VV A + +   ++ 
Sbjct: 178 AVAIDAIINQKHTGIKCIYVAVGQKQSSIAAVVRKLEEHGAMDHTIVVAAGAADPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    ++ E+F  +G++ L++ D +++ A + R+I+      P    +P  VF    R
Sbjct: 238 LAPYAGTSMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNADYVEQFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A +   KKL  ++   + ++ E   +     +   +
Sbjct: 358 TNLFNSGIRPAMNAGISVSRVGGAAQTKIMKKLGGNIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ+ 
Sbjct: 415 DEATRKQLEHGQRVTELMKQNQ 436


>gi|126662883|ref|ZP_01733882.1| ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase)
           [Flavobacteria bacterium BAL38]
 gi|126626262|gb|EAZ96951.1| ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase)
           [Flavobacteria bacterium BAL38]
          Length = 525

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/454 (22%), Positives = 168/454 (37%), Gaps = 38/454 (8%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q    +     ++  G +  +      V  LS     G+ V  +         V+ 
Sbjct: 11  AILKQQLSGFESGASLEEVGTVLQVGDGIARVYGLS-NAQYGELVQFENG---LEAIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  G  V    R   +       GRV++ LG PIDG   +G   
Sbjct: 67  LEEDNVGVVLLGPSTGIKEGSTVKRTQRIASLKVGEQMVGRVVDTLGNPIDGKGPIGGEL 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  V      GKST+      
Sbjct: 127 YEMPLERKAPGVIFRQPVTEPLQTGVKAVDAMIPVGRGQRELVIGDRQTGKSTVCIDTIL 186

Query: 184 SDCFDK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +             I   +G++   V    +          +V+V A + +   ++  AP
Sbjct: 187 NQKEFYDAGKPVFCIYVAIGQKASTVAGIAKMLEEKGAMAYTVIVAANASDPAPMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           +    I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 247 MAGAAIGEYFRDSGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                            G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RACKVINNDEIAKNMNDLPDSIKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L     +F E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQFRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSED 428
              +D +    + +     + LKQ  +   + ED
Sbjct: 424 GSDLDAVTLNVIEKGKRNVEILKQGLNSPFTVED 457


>gi|90413752|ref|ZP_01221740.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
 gi|90325221|gb|EAS41718.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
          Length = 513

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/454 (22%), Positives = 195/454 (42%), Gaps = 32/454 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +N          G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIENFNVVSEARNEGTIVSVSDGIIRVHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFALALNLERDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPALLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+   D++  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGSID-TDITSPVEVIAPGVIDRKSVDQPLQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     +   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKDSGIYSVYVAIGQKASTIANVVRKLEEHGALENTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSEHYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
            + L + G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QKELFDGGLRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +D    K +     + + +KQ     +   VF++
Sbjct: 413 LDAATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 444


>gi|296120447|ref|YP_003628225.1| ATP synthase F1 subunit alpha [Planctomyces limnophilus DSM 3776]
 gi|296012787|gb|ADG66026.1| ATP synthase F1, alpha subunit [Planctomyces limnophilus DSM 3776]
          Length = 503

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 107/432 (24%), Positives = 181/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N + +A + +   ++        + G +  +      V  L+  +  G+ V     +
Sbjct: 1   MKFNADEIASVIQREIQDFRGQIQTNEVGTVVEVGDGIARVYGLTNAMS-GEMVEF---S 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           S   GQV  +  + V +  +G   +IS GD V   G+   I       GRV++ LG  +D
Sbjct: 57  SGVRGQVFNLEENSVGVIILGSYLKISEGDEVRATGQLLSIPVGDALIGRVVDPLGNALD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + S  + +  P    RQ V++  +TGI+ +D  TP+  GQR  +      GK
Sbjct: 117 GRGPII-AESSRPLETTAPGVAARQPVKQPMQTGIKAVDAMTPVGRGQRQLIIGDRKTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I    G+R   +   +E          ++VV A + +   L+
Sbjct: 176 TAVAIDAIINQKGGDVICIYVACGQRASSIGGVVEALKAAGAMDYTIVVAAGASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     IAEYF  +G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 236 YIAPYAGAAIAEYFMYQGKHTLVVYDDLSKQAVAYRQLSLLMRRPPGREAYPGDVFYCHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++TA+  +       +  I  +V SI DG I L   L   G  P
Sbjct: 296 RLLERAAKLSDELGGGSMTALPIIETLEGEVSAYIPTNVISITDGQIYLEPDLFFAGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A +   KK+  SL   +  F E      +G     +D    K V +
Sbjct: 356 AINVGISVSRVGGNAQTKGMKKVAGSLRLDLAAFRELEAFAQLGTE---LDAATQKQVDR 412

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 413 GYRMVELLKQPQ 424


>gi|156144844|gb|ABU52983.1| ATP synthase subunit 1 [Stellaria sp. Qiu 95015]
          Length = 386

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 93/394 (23%), Positives = 164/394 (41%), Gaps = 23/394 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            K++  S    + ++ E   +     +   +D  
Sbjct: 356 MKQVCGSPKLELAQYRE---VAAFAQFGSDLDAA 386


>gi|164685636|gb|ABY66764.1| atp1 [Frangula caroliniana]
          Length = 413

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|190358160|sp|A7N0Y3|ATPA1_VIBHB RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
          Length = 513

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 187/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G    +  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYANLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  + R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIARKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|126445125|ref|YP_001061232.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 668]
 gi|254182906|ref|ZP_04889499.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 1655]
 gi|254299701|ref|ZP_04967150.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 406e]
 gi|126224616|gb|ABN88121.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           668]
 gi|157809533|gb|EDO86703.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 406e]
 gi|184213440|gb|EDU10483.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 1655]
          Length = 435

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 165/438 (37%), Positives = 235/438 (53%), Gaps = 12/438 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           L  L  L E  S  +    G ++ +T +    +     +  G+  V +  + D +  QV+
Sbjct: 3   LSALRNL-ELDSVPVARMTGRLTGVTGLLLKASG--CRLETGERCVIESADGDRIDAQVV 59

Query: 64  RINLDIVYICPVGIGEEISLGDLV---FHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
             N +  ++ P      +  G  V      G  RI     W GR++N LG+ IDG   LG
Sbjct: 60  GFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRI--GRSWLGRIVNGLGEAIDGRGPLG 117

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            GD  +         + ++ V      G+R I+    L  GQRIG+ AGSG+GKS LL M
Sbjct: 118 -GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRGQRIGLMAGSGVGKSMLLGM 176

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R+   D V++ L+GERGREVREF++       L KSV+V A +DESP++R  A     
Sbjct: 177 ITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLVAAPADESPLMRLKAAELCH 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IA +F   G NVLL++DS+TR+A + REIA + GE P  RGYP SVF  LP+L+E  G 
Sbjct: 237 AIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATRGYPPSVFGMLPQLVETAGN 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R LAE G YP +D   SVSR
Sbjct: 297 GEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTRELAERGHYPAIDVPRSVSR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +   A+   L   +  +I R E+ RD+  +GGY  G D   D+AV +   I  FL+Q
Sbjct: 356 CMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGADPATDEAVAKAARIDTFLRQ 415

Query: 420 SPSDLSSEDVFQEITKKL 437
              D++  D      K+L
Sbjct: 416 DMLDVARHDATLAALKEL 433


>gi|193890927|gb|ACF28623.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 403

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 93/402 (23%), Positives = 167/402 (41%), Gaps = 23/402 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 LAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQQQ 394


>gi|114319873|ref|YP_741556.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226267|gb|ABI56066.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 458

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 155/435 (35%), Positives = 235/435 (54%), Gaps = 9/435 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQVIR 64
           E L +  +      +V  G +  +  +            LG     + + + D   +V+ 
Sbjct: 15  EHLRRRRQRVRAPRLVVEGVLRRMVGLTLEAEG--CQAPLGSRCTLRTQQDRDVEAEVVG 72

Query: 65  INLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              D +Y+ P G    +     V    G           GRV++  G+P+DG   L   +
Sbjct: 73  FAGDKLYLMPTGELHGMMPNARVVPRGGTAEAGMGPGLLGRVLDGGGRPLDGKGLLDHSE 132

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               ++ +    + R  ++     G+R I+    +  GQR+G+FAGSG+GKS LL M  R
Sbjct: 133 YR-SLVGEGINPLARAPIKAPLDVGVRAINSLFTVGRGQRMGLFAGSGVGKSVLLGMMTR 191

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D V++ L+GERGREV+EFI D LGD  L +SVVV + +D+SP++R    + A +IA
Sbjct: 192 YTNADVVVVGLIGERGREVKEFITDILGDEGLARSVVVASPADKSPLMRLHGAMLATSIA 251

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G NVLL++DS+TR+A + REI    GE P  +GYP SVF+ LPRL+ER G    
Sbjct: 252 EYFRDQGLNVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFALLPRLVERAGNGPD 311

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R LA+ G YP +D  ASVSR   
Sbjct: 312 DGGSITAFYTVLTEGDDQQDPIADAARAILDGHLVLSRQLADAGHYPAIDIEASVSRAMI 371

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                  ++L      L   + E +D+  +G Y+ G D  +D+A+  +P +  FL+Q   
Sbjct: 372 NITERGHQRLAQRFRQLWSTYRENQDLISVGAYQKGSDPRVDEAIAIMPRLRAFLQQ--- 428

Query: 423 DLSSEDVFQEITKKL 437
           D+S+   F E  ++L
Sbjct: 429 DVSTAVNFGESLEQL 443


>gi|163781860|ref|ZP_02176860.1| flagellar export protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883080|gb|EDP76584.1| flagellar export protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 428

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 153/421 (36%), Positives = 232/421 (55%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +  ++ +Y      +     GD V +         G+VI  N D   + P G  
Sbjct: 4   VRVYGKVVKVSGIYL--EAYNPGSATGDLVEIFPSTGKSIYGEVIGFNEDRCIVMPYGRL 61

Query: 79  EEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             I  GD V                G+V+N  G+P+DG  S+      + I       + 
Sbjct: 62  SGIKPGDRVLIKSEHVSTQVGKALLGKVVNPFGEPLDG--SMVFTAERLPIELSSINPLE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+R+ + F TG+R I+    L  GQ++G+FAG+G+GKSTLL M       D V+++L+GE
Sbjct: 120 RERITEIFDTGVRSINAMFTLGKGQKVGIFAGAGVGKSTLLGMITNYSNADVVVMALIGE 179

Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           RGREVREF+ED LGD LKKSVVVV+T+DE P+++    L+AV  A +F+S+G +VLL++D
Sbjct: 180 RGREVREFVEDVLGDGLKKSVVVVSTADEPPVVKVKGALSAVVHARFFASQGLDVLLVMD 239

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           SITRFA + REI   +GE P  +GY  SVF  +  ++E  G      G+IT + SVLV+G
Sbjct: 240 SITRFAMAQREIGLAAGEPPTLKGYTPSVFHMMTNIVESCGN-FTRGGSITGIFSVLVEG 298

Query: 318 DNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           D+   DP+AD++  + DGHIVL+R  A  G +P +DP+ S+SRL  K  S +  ++   +
Sbjct: 299 DDITLDPVADALVGVFDGHIVLSRKRANAGLFPAIDPVKSLSRLMPKLVSEEHMRMAMYV 358

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+  +E   D+  +G Y+ G +L +D+ +    +I  F +Q   +  S D   +   +
Sbjct: 359 KELLSSYESMEDLVNLGLYKRGSNLAVDRVIDNKELIDGFFRQDYREGVSFDESLQGLSR 418

Query: 437 L 437
           L
Sbjct: 419 L 419


>gi|20146578|gb|AAM12443.1| ATP synthase alpha subunit [Halesia carolina]
          Length = 399

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V             + +  + V I   G    I  
Sbjct: 1   GQVVSVGDGIARVYGLNE-IQAGEMVEFAXG---VKAIALILENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 399


>gi|324986491|ref|YP_004276361.1| ATP synthase CF1 alpha subunit [Pinus nelsonii]
 gi|323522679|gb|ADX94927.1| ATP synthase CF1 alpha subunit [Pinus nelsonii]
          Length = 507

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 99/430 (23%), Positives = 174/430 (40%), Gaps = 19/430 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
            ++ ++++     K       V   G +  +      +  L + V  G+ V         
Sbjct: 5   QIDEISRIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGT 60

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG  
Sbjct: 61  VGIALNLGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +                 +R+ V +  +TG+  ID   P+  GQR  +      GK+ +
Sbjct: 121 QISXXXXXXXXXXXX-XXXSRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 179

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
            +    +        +   +G+R   V + +  +        ++VV  T+D    L+ +A
Sbjct: 180 ATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLL
Sbjct: 240 PYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 299

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++
Sbjct: 300 ERAAKLSSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAIN 359

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++   L   + +F E         +   +D      + +   
Sbjct: 360 VGISVSRVGSAAQIKAMKEVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQR 416

Query: 413 IYDFLKQSPS 422
           + + LKQS S
Sbjct: 417 LRELLKQSQS 426


>gi|33594184|ref|NP_881828.1| F0F1 ATP synthase subunit alpha [Bordetella pertussis Tohama I]
 gi|81578353|sp|Q7VU46|ATPA_BORPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33564259|emb|CAE43551.1| ATP synthase alpha chain [Bordetella pertussis Tohama I]
 gi|332383598|gb|AEE68445.1| F0F1 ATP synthase subunit alpha [Bordetella pertussis CS]
          Length = 513

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 101/446 (22%), Positives = 182/446 (40%), Gaps = 30/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   + L     V   G + S+T     +  LS  V  G+ +      
Sbjct: 1   MQLNPSEISELLKSRIEGLGASTDVRTQGTVVSVTDGITRIHGLSD-VMQGEMLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G    +S GD V   GR   +       GRV+N LG  ID
Sbjct: 58  -NVFGVALNLERDSVGAVVLGDYTGVSEGDQVKTTGRILEVPVGPELKGRVVNTLGDAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +      + I    P  + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTTQTDI-IEKVAPGVIARRSVSQPLQTGIKAIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++ ++       +   +G++   +   +           ++VV A + +S  ++
Sbjct: 176 TAVAVDTIISQKGKGVTCVYVAIGQKASTINNVVRKLEEHGAMEYTIVVAAAASDSAAMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            MA     T+ EYF  +G++ L++ D +T+ A + R+++      P    YP  VF    
Sbjct: 236 YMAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGVRPAINAGISVSRVGGAAQTKVIKKLSGGIRTDLAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDL 424
           +D    + + +   + + LKQ     
Sbjct: 413 LDDATRRQLERGKRVVELLKQPQYQP 438


>gi|330447946|ref|ZP_08311594.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492137|dbj|GAA06091.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 450

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 154/431 (35%), Positives = 237/431 (54%), Gaps = 6/431 (1%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-G 60
           +   ++L  LA      +    G +  +  +      +     L    +    + + +  
Sbjct: 3   RLQADSLTALAALDRVPIAKVTGRLVKVNGLMLQ--AVGCRFKLDQRCLIVADDGEQIEA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + +I Y+ PV     +  G  V    G   ++ S  W GRV+N LG+P+D  + L
Sbjct: 61  QVVGFDHNIAYLMPVRQLGGLYAGAKVIPMQGGSTVNVSHEWIGRVVNGLGEPLDNGEPL 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+  + +  K    M RQ VE     GI+ I+    +  GQRIG+ AGSG+GKS L+ 
Sbjct: 121 QGGE-RLSLEPKPINPMKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLMG 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M  +    D +++ L+GERGREVREFI  +   +  K++V++ A +DESP++R  A    
Sbjct: 180 MITQFTAADIIVVGLIGERGREVREFIERNLGEEGRKRAVIIAAPADESPLMRLRATKLC 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G
Sbjct: 240 HRVAEYFRDQGKDVLLMMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+ +VL +GD+  DP+ DS R+ILDGHIVL+R+LAE+G YP +D  AS+S
Sbjct: 300 NGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASIS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R            + +    L   +++ +++  +GGY+ G D  LD+AV   P +  FL+
Sbjct: 360 RCMSSCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFLQ 419

Query: 419 QSPSDLSSEDV 429
           Q  S+      
Sbjct: 420 QPVSEHCDYQA 430


>gi|218711025|ref|YP_002418646.1| F0F1 ATP synthase subunit alpha [Vibrio splendidus LGP32]
 gi|218324044|emb|CAV20406.1| ATP synthase alpha chain [Vibrio splendidus LGP32]
          Length = 523

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++    ++  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGILSIHGLAD-VMQGEMIELPGG- 68

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +N D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 69  --RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 127 GKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           +VVVVA++ ES  L+
Sbjct: 186 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYREL---AAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|322696841|gb|EFY88627.1| ATP synthase alpha chain precursor [Metarhizium acridum CQMa 102]
          Length = 778

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 98/446 (21%), Positives = 172/446 (38%), Gaps = 53/446 (11%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  L+  V   + V      S   G  + +    V +   G    
Sbjct: 263 AETGRVLSVGDGIARVHGLA-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 318

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRV++ALG PIDG   L   +       K P  + R+
Sbjct: 319 VKEGEAVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPLNTKE-RRRAQLKAPGILPRK 377

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----K 189
            V +  +TG + +D   P+  GQR  +      GK      T+L+    +   D      
Sbjct: 378 SVNEPVQTGFKSVDAMVPIGRGQRELIIGDRQTGKTAVGLDTILNQKRWNSGSDESKKLY 437

Query: 190 VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL------------ 236
            +   VG++   V + ++    ++  K S++V AT+ E+     +               
Sbjct: 438 CVYVAVGQKRSTVAQLVKTLEENDAMKYSIIVAATASEAAPSALLLVWWASVLSTTVLLI 497

Query: 237 -------------------TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
                                 +IAE+F   G + L+I D +++ A + R+++      P
Sbjct: 498 SWRFLHFFLSGRHTNNSVLQGASIAEWFRDSGRHALVIYDDLSKQAVAYRQMSLLLRRPP 557

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  VF    RLLER     K+   G++TA+  +   G + +  I  +V SI DG 
Sbjct: 558 GREAYPGDVFYLHSRLLERAAKLNKDHGGGSMTALPIIETQGGDVSAYIPTNVISITDGQ 617

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +
Sbjct: 618 IFLESELFYKGIRPAINVGLSVSRVGSSAQLKAMKQVAGSLKLFLAQYRE---VAAFAQF 674

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D    + + +   + + LKQ  
Sbjct: 675 GSDLDAATKQTLARGERLTELLKQKQ 700


>gi|291277238|ref|YP_003517010.1| flagellum-specific ATP synthase [Helicobacter mustelae 12198]
 gi|290964432|emb|CBG40282.1| flagellum-specific ATP synthase [Helicobacter mustelae 12198]
          Length = 434

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 163/437 (37%), Positives = 243/437 (55%), Gaps = 7/437 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDF-VVHQGKNSDNLGQV 62
           +L+++    E     L  + G +  IT      + L+    +GD   VH+   S  LG V
Sbjct: 2   SLQSIKAKLEA-PLQLSPKFGLVEKITPTILYASGLTP--SIGDIVCVHREDGSSGLGMV 58

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
                +     P    E   +GD VF     F +       GRVI+ LG PID    +  
Sbjct: 59  TLCQSENFGFTPFSFIEGYKVGDKVFIEKEGFLLPVGKDVLGRVIDPLGNPIDEKGPITT 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               + I+S+   AM R  +++ F  GI+ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 S-AHIPIISQPIKAMRRGVIDEVFSVGIKAIDGLLTCGKGQKLGIFAGSGVGKSTLMGMI 177

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            +       +++L+GERGREV EFI+  L +NL+ +V+VVATSD+S ++RK    +A+ +
Sbjct: 178 VKGSKAPIKVVALIGERGREVPEFIQKNLDNNLENTVIVVATSDDSALMRKYGAFSAMAV 237

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F ++G +VL I+DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E
Sbjct: 238 AEFFKNQGHDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLALLPQLMERAGKEE 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP+  L S SR++
Sbjct: 298 G-RGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSRELTDFGIYPPIHILNSASRVS 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +   + + +    +   L    +E   +  IG Y+ G D  LD+A+ +   + DF+ Q  
Sbjct: 357 NDIITKEHRNAAKNFRKLYALLKENEVLIRIGSYQKGTDPDLDEAIEKKKFMEDFITQEE 416

Query: 422 SDLSSEDVFQEITKKLQ 438
             L   D   E   K+Q
Sbjct: 417 DQLFDFDAIIEELYKIQ 433


>gi|254430005|ref|ZP_05043712.1| ATP synthase F1, alpha subunit [Alcanivorax sp. DG881]
 gi|196196174|gb|EDX91133.1| ATP synthase F1, alpha subunit [Alcanivorax sp. DG881]
          Length = 514

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 183/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKSRIAKLDTSTEARNEGTVVSVSDGIVRIHGLAD-VMFGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G  V   GR    P      GRV++ALG PIDG
Sbjct: 60  -IYGMALNLEQDSVGAVVLGDYLGLAEGQKVRCTGRILEVPTGPEMLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  +    P  + R+ V +  +TG + ID   P+  GQR  +     IGK+
Sbjct: 119 KGPID-AKQTDAVEKVAPGVIWRREVNEPVQTGYKSIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +      +  D   K +   +G++   +   +         + +++V A++ +   ++ 
Sbjct: 178 AVAVDAIINQKDSGIKCVYVAIGQKQSTIANVVRKLEEHGAMENTIIVAASASDPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     ++              G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERAAKVNEDYVEQFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNSGIRPAMNAGVSVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +     + + +KQ      S
Sbjct: 415 DDSTREQLEHGQAVTELMKQKQYSPMS 441


>gi|27461569|gb|AAM95201.1| ATPase F1 alpha subunit [Rapatea xiphoides]
          Length = 414

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|323496908|ref|ZP_08101936.1| F0F1 ATP synthase subunit alpha [Vibrio sinaloensis DSM 21326]
 gi|323317982|gb|EGA70965.1| F0F1 ATP synthase subunit alpha [Vibrio sinaloensis DSM 21326]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  LS  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLSSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|148978363|ref|ZP_01814868.1| F0F1 ATP synthase subunit alpha [Vibrionales bacterium SWAT-3]
 gi|145962522|gb|EDK27800.1| F0F1 ATP synthase subunit alpha [Vibrionales bacterium SWAT-3]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++    ++  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGILSIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +N D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEHYVETFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|57868894|gb|AAW57443.1| ATP synthase alpha subunit [Acanthogilia gloriosa]
          Length = 388

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 95/393 (24%), Positives = 163/393 (41%), Gaps = 21/393 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGRAMLGRVVDALGLPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISL 194
             +TG++ +D   P+  GQR  +      GK+ +      +               +   
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRSESETLYCVYVA 175

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V + ++     N  + S++V ATS +   L+ +AP +   + EYF   G + L
Sbjct: 176 IGQKRSTVAQLVQILSEANALEYSILVAATSSDPAPLQFLAPYSGCAMGEYFRDNGMHAL 235

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVI 311
           +I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+ 
Sbjct: 236 IIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALP 295

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K+
Sbjct: 296 VIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQ 355

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +  SL   + ++ E   +     +   +D    
Sbjct: 356 VCGSLKLELAQYRE---VAAFAQFGSDLDAATQ 385


>gi|120600837|ref|YP_965411.1| F0F1 ATP synthase subunit alpha [Shewanella sp. W3-18-1]
 gi|146295038|ref|YP_001185462.1| F0F1 ATP synthase subunit alpha [Shewanella putrefaciens CN-32]
 gi|158512987|sp|A1RQB2|ATPA_SHESW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166201679|sp|A4YCI0|ATPA_SHEPC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|120560930|gb|ABM26857.1| ATP synthase F1, alpha subunit [Shewanella sp. W3-18-1]
 gi|145566728|gb|ABP77663.1| ATP synthase F1, alpha subunit [Shewanella putrefaciens CN-32]
 gi|319428556|gb|ADV56630.1| ATP synthase F1, alpha subunit [Shewanella putrefaciens 200]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 100/443 (22%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + RQ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-NDGFSPVEVIAPGVIERQSVSQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D   K +   +G++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TAMAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYSGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEIYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGVRVTELMKQKQ 435


>gi|258625007|ref|ZP_05719930.1| ATP synthase subunit A [Vibrio mimicus VM603]
 gi|258582705|gb|EEW07531.1| ATP synthase subunit A [Vibrio mimicus VM603]
          Length = 523

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  +  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-IMQGEMIELPG-- 67

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 68  -NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G   L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 127 GKGPIG-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 186 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 423 LDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|30961786|gb|AAP40007.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 364

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 160/365 (43%), Gaps = 10/365 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 3   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 62

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 63  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 121

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVVV A++ +S  ++ +AP
Sbjct: 122 IDTIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVVNASASDSAAMQYLAP 181

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 182 YAGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 241

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 242 RAAKVCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 301

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E +       +   +D    K + +   +
Sbjct: 302 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERGQRM 358

Query: 414 YDFLK 418
            + LK
Sbjct: 359 VEVLK 363


>gi|161505608|ref|YP_001572720.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189081313|sp|A9MJR7|ATPA_SALAR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|160866955|gb|ABX23578.1| hypothetical protein SARI_03784 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAYTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|16762459|ref|NP_458076.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16767151|ref|NP_462766.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29143947|ref|NP_807289.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56415735|ref|YP_152810.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161616987|ref|YP_001590952.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167994871|ref|ZP_02575961.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168239811|ref|ZP_02664869.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168263237|ref|ZP_02685210.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464798|ref|ZP_02698690.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168823196|ref|ZP_02835196.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194442810|ref|YP_002043113.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194451394|ref|YP_002047896.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194735882|ref|YP_002116808.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250148|ref|YP_002148802.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262938|ref|ZP_03163012.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197364663|ref|YP_002144300.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198246029|ref|YP_002217813.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200387995|ref|ZP_03214607.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928828|ref|ZP_03220027.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205354550|ref|YP_002228351.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207859090|ref|YP_002245741.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213427468|ref|ZP_03360218.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213609337|ref|ZP_03369163.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|238913120|ref|ZP_04656957.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289826261|ref|ZP_06545373.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|81571844|sp|Q7CPE1|ATPA_SALTY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81591816|sp|Q8XG95|ATPA_SALTI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81599723|sp|Q5PKX0|ATPA_SALPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189081314|sp|A9MXA8|ATPA_SALPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739931|sp|B5EYZ8|ATPA_SALA4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739932|sp|B5FN35|ATPA_SALDC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739933|sp|B5QUS6|ATPA_SALEP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739934|sp|B5RFW1|ATPA_SALG2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739935|sp|B4TAX4|ATPA_SALHS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739936|sp|B4SYD3|ATPA_SALNS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739937|sp|B5BIN8|ATPA_SALPK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739938|sp|B4TN33|ATPA_SALSV RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|25290437|pir||AD0954 ATP synthase alpha chain [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16422441|gb|AAL22725.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|16504764|emb|CAD03128.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139583|gb|AAO71149.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129992|gb|AAV79498.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161366351|gb|ABX70119.1| hypothetical protein SPAB_04808 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401473|gb|ACF61695.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194409698|gb|ACF69917.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194711384|gb|ACF90605.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632185|gb|EDX50669.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197096140|emb|CAR61736.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213851|gb|ACH51248.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197241193|gb|EDY23813.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197287555|gb|EDY26948.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197940545|gb|ACH77878.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605093|gb|EDZ03638.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204322261|gb|EDZ07459.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205274331|emb|CAR39355.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205327332|gb|EDZ14096.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205340514|gb|EDZ27278.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205348244|gb|EDZ34875.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710893|emb|CAR35257.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261249007|emb|CBG26865.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996154|gb|ACY91039.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160399|emb|CBW19925.1| ATP synthase alpha subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914998|dbj|BAJ38972.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320088292|emb|CBY98053.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321222163|gb|EFX47236.1| ATP synthase alpha chain [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322617220|gb|EFY14125.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619092|gb|EFY15978.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625159|gb|EFY21987.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630210|gb|EFY26981.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634365|gb|EFY31099.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635249|gb|EFY31964.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642874|gb|EFY39459.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645078|gb|EFY41608.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650427|gb|EFY46839.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653619|gb|EFY49946.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661553|gb|EFY57776.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661635|gb|EFY57854.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669797|gb|EFY65939.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671990|gb|EFY68109.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674999|gb|EFY71085.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683689|gb|EFY79702.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686076|gb|EFY82061.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323132229|gb|ADX19659.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323192007|gb|EFZ77244.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200501|gb|EFZ85579.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202730|gb|EFZ87767.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208307|gb|EFZ93248.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211742|gb|EFZ96575.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218604|gb|EGA03311.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220005|gb|EGA04475.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224776|gb|EGA09041.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232516|gb|EGA16618.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235291|gb|EGA19376.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323241079|gb|EGA25116.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241372|gb|EGA25404.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248602|gb|EGA32532.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252099|gb|EGA35959.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258597|gb|EGA42260.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262371|gb|EGA45929.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268208|gb|EGA51684.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270622|gb|EGA54067.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625600|gb|EGE31945.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326629685|gb|EGE36028.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|114569221|ref|YP_755901.1| flagellum-specific ATP synthase [Maricaulis maris MCS10]
 gi|114339683|gb|ABI64963.1| flagellar protein export ATPase FliI [Maricaulis maris MCS10]
          Length = 448

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 162/422 (38%), Positives = 242/422 (57%), Gaps = 8/422 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++++  +          + LG     +  N     +V+    +   + P G  E I  
Sbjct: 19  GRVTALNGLLVEAEGPKAGLSLGAHAKIETGNGIAECEVVGFRGETALMMPFGPLEGIRP 78

Query: 84  GDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G          R+ PS  W GRV++  G+P+D    L +G     +    P A  R R+ 
Sbjct: 79  GARALLQPEAARVRPSRAWLGRVLDGFGRPLDDGVPLTEGGTPYPLKGNPPSAHARARLG 138

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+RV++ F P+  GQR+G+FAGSG+GKS L+SM AR+   D ++I L+GERGRE 
Sbjct: 139 ERMDMGVRVLNSFVPMRRGQRLGIFAGSGVGKSVLMSMLARACDADVIVIGLIGERGREA 198

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF++D LG +  K+SVV+  TSD   + R+ A    +T AEYF  +G +VL ++DS+TR
Sbjct: 199 REFVDDVLGPEGRKRSVVITETSDAPALARRQAAHLTLTAAEYFRDQGLDVLCLMDSVTR 258

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-----GNITAVISVLVD 316
           FA + REI   +GE P  RGY  SVF+ELPRLLER GP  + K     G+IT + +VLVD
Sbjct: 259 FALAQREIGLAAGEPPTTRGYTPSVFAELPRLLERAGPGPQRKDGKKSGSITGLFTVLVD 318

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+HN+PIAD+VR ILDGH+V++R++AE GRYP +D L SVSR A + + A E+ LV+  
Sbjct: 319 GDDHNEPIADAVRGILDGHVVMSRAIAERGRYPAIDVLKSVSRTAPEVYDAAERPLVAEA 378

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435
              +  + +  ++  +G Y  G +  +D+A+     +  FL QS  D +     F  +++
Sbjct: 379 RKHLSAYADMEELIRLGAYTQGSNPAVDRAIELNEPLEAFLGQSKDDAADIPSTFTMLSE 438

Query: 436 KL 437
            L
Sbjct: 439 IL 440


>gi|304313403|ref|YP_003813001.1| F1-ATP synthase, alpha subunit [gamma proteobacterium HdN1]
 gi|301799136|emb|CBL47379.1| F1-ATP synthase, alpha subunit [gamma proteobacterium HdN1]
          Length = 514

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 185/447 (41%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    +L         G I S++     V  L+     G+ +  +  + 
Sbjct: 3   QLNPSEISEIIKQRIGSLDTTAEARNEGTIVSVSDGIVRVHGLAD-AMYGEMLSFENGS- 60

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G   +++ G  V    +   +       GRV++ALG PIDG
Sbjct: 61  --YGMALNLEQDSVGAVVLGNYLDLAEGQKVQCTSKVLEVPIGDALLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  I    P  + R+ V++  +TG++ +D   P+  GQR  +     IGK+
Sbjct: 119 KGPINST-LTDRIEKVAPGVIWRKSVDQPVQTGMKSVDSMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            L      +      K I   +G++   +   +     +     +++VVA++ +   ++ 
Sbjct: 178 ALAIDTIINQKGSGIKCIYVAIGQKQSSIANVVRKLEENGAMAHTIIVVASASDPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPFTGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVSAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SSLFNAGIRPAMNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      +
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQYSPLT 441


>gi|269965295|ref|ZP_06179416.1| ATP synthase subunit A [Vibrio alginolyticus 40B]
 gi|269830096|gb|EEZ84324.1| ATP synthase subunit A [Vibrio alginolyticus 40B]
          Length = 523

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 11  MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 68

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 69  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 126

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  ++  +    P  ++R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 127 GKGPI-EAKMTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQIGK 185

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D     I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 186 TALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 246 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 305

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 306 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 365

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 366 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 423 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 456


>gi|331671790|ref|ZP_08372586.1| flagellar protein export ATPase FliI [Escherichia coli TA280]
 gi|331070779|gb|EGI42138.1| flagellar protein export ATPase FliI [Escherichia coli TA280]
          Length = 445

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 230/425 (54%), Gaps = 7/425 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  L    G +  +  +      +   +  G     +  N   +  Q +  N DI Y+ P
Sbjct: 16  SIPLARVAGRLVRLNGILL--ESVGCPLMTGQLCRIESANHTLIDAQAVGFNRDITYLMP 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
                 +  G  VF   +   I     W GRV+N LG+P+DG   L   DL   +   V 
Sbjct: 74  FKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLNGNDLLPPLPPLV- 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V++    G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 NPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRQTKADIVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      D L KS+VVVA +DESP++R  A     +IA +F  +G +V
Sbjct: 193 LIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHSIAAWFRDRGHHV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F  +P+L+E  G SE   G++TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNSES-SGSMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++  S + ++ 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCMNQVTSLEHQQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             +L      + E + +  +GGY  G D  +DKAV   P I  FL+Q   + +S ++ Q 
Sbjct: 372 ARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEMREPASLELVQS 431

Query: 433 ITKKL 437
             + L
Sbjct: 432 RLQIL 436


>gi|189017732|gb|ACD71535.1| F1-ATPase alpha subunit [Metanarthecium luteo-viride]
          Length = 399

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 7   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 63

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 64  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 122

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 123 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 182

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 183 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 243 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 303 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 360 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 390


>gi|167842297|ref|ZP_02468981.1| type III secretion system ATPase [Burkholderia thailandensis
           MSMB43]
          Length = 445

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 152/419 (36%), Positives = 221/419 (52%), Gaps = 11/419 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G ++ +       T    +V L +    +    D   +V+ I  D   + P      
Sbjct: 28  TRFGRVTEVGPTLLRATL--PHVGLAELCRLEPAGID--AEVVSIEGDTALLSPFAEPRG 83

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I+ G  V   GR  RI       GRV++ LG+  D    +      +++    P  + R 
Sbjct: 84  IAAGCAVRPLGRAHRIPVGTFLLGRVVDGLGRLFDHGPDVPDSATWVDLARSAPDPLRRA 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            ++     G+R ID       GQR+G+FA +G GKSTLL M       D  +++L+GERG
Sbjct: 144 IIDTPLPLGVRAIDGLLTCGRGQRVGIFAAAGGGKSTLLGMICDGSLADVTVLALIGERG 203

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+      +   +++VVVATSD   + R  A  TA  IAE+F  +G +VLL++DS
Sbjct: 204 REVREFLEHTLTPEARARAIVVVATSDRPALERLKAAYTATAIAEHFRDQGRDVLLMMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P A  YP S F+ LP LLER GP+    G+IT + +VLV+GD
Sbjct: 264 LTRFARAAREIGLAAGEKPAAGSYPPSFFARLPGLLERAGPAAT--GSITGLYTVLVEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           N N+P+AD VRSILDGHIVL+R LAE   YP +D  ASVSR+  +  +   +   + L  
Sbjct: 322 NLNEPVADEVRSILDGHIVLSRKLAEANHYPAIDVGASVSRVMSQIVATRHRDGAARLRR 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           L   + +   +  +G YR G D   D A+ +   I  FL QS +D +S   F +  ++L
Sbjct: 382 LDAVYRDIELLVRVGEYRHGADPEADDALARREAIRQFLCQSVTDKTS---FDQTLEQL 437


>gi|149908767|ref|ZP_01897428.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36]
 gi|149808309|gb|EDM68248.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36]
          Length = 444

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 156/437 (35%), Positives = 237/437 (54%), Gaps = 10/437 (2%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVI 63
           E L Q  E      V    G +  I  +   VT     + +G     +  N+ +L  +V+
Sbjct: 7   ERLIQAVESIDAGAVAKVYGRLVRINGLTLEVTG--CRLSIGQRCFIETLNNGSLAAEVV 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
             N DI Y+ P+     +  G  V        I       GRV++ L +P+DG  ++   
Sbjct: 65  GFNRDISYLMPLQHAVGLFSGARVSPQSGIENIVVGEQLLGRVVDGLLQPLDGLPAITGE 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             S+ + S     ++RQ + +    GIR I+       GQR+G+FAGSG+GKS LL M  
Sbjct: 125 --SIPLFSLPNNPLSRQPISEPIDVGIRCINAVLTPGKGQRLGLFAGSGVGKSVLLGMMT 182

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    + +I+ L+GERGREVREFI      +  K+++VV A +D + ++R  A      +
Sbjct: 183 RYTEAEIIIVGLIGERGREVREFIEHSLGEEGRKRAIVVAAPADATALMRLRAAQVCHRL 242

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +G +VLL++DS+TR+A + REI    GE P  +GYP SVFS L +L+ER G   
Sbjct: 243 AEHFRDQGKHVLLLMDSLTRYAQAQREIGLAMGEPPATKGYPPSVFSLLTQLVERAGNGL 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+ +VLV+GDN  +PIAD+ R+ILDGHIVL+R LAE+G YP +D  AS+SR+ 
Sbjct: 303 G-SGSMTAIYTVLVEGDNQQEPIADAARAILDGHIVLSRDLAEQGHYPAIDISASISRVM 361

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +    D       L  L   +++ R++  +GGY+PG D+ +D AV + P I  FL+Q  
Sbjct: 362 PQVVKKDYLAHAIKLKKLYSSYQQIRELIPLGGYQPGKDMQVDYAVQKFPAIAAFLQQGL 421

Query: 422 SDLSS-EDVFQEITKKL 437
            + S   D   ++   +
Sbjct: 422 DEQSGLSDSMNQLIHLM 438


>gi|89112860|gb|ABD61042.1| ATPase alpha subunit [Leea guineensis]
          Length = 398

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 157/377 (41%), Gaps = 19/377 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  S
Sbjct: 5   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGS 64

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 65  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 123

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 124 IDTILNQKQMNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 183

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 184 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 243

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V  I DG I L   L  
Sbjct: 244 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFY 303

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 304 RGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQ 360

Query: 405 KAVHQVPIIYDFLKQSP 421
             +++   + +  KQ  
Sbjct: 361 ALLNRGARLTEVSKQPQ 377


>gi|168234375|ref|ZP_02659433.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194469492|ref|ZP_03075476.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194455856|gb|EDX44695.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205331676|gb|EDZ18440.1| ATP synthase F1, alpha subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|32266064|ref|NP_860096.1| flagellum-specific ATP synthase [Helicobacter hepaticus ATCC 51449]
 gi|32262113|gb|AAP77162.1| flagellum-specific ATP synthase FliI [Helicobacter hepaticus ATCC
           51449]
          Length = 458

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 168/460 (36%), Positives = 247/460 (53%), Gaps = 30/460 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH------------ 51
           +L  + Q  ++ + NL    G++  +         +   V  GD V              
Sbjct: 2   SLSQIKQKLQN-NINLSPSYGHLVKVMQNMLVANGVKPSV--GDIVKILSHYEAPSLKEC 58

Query: 52  -----------QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
                          + NLG V+ I  +  +I P    E    GD V        I    
Sbjct: 59  NQSSEESLQFAHNMQTHNLGMVMAIEGEHFFISPFSFIEGHKCGDKVEILNHGLHIPVGE 118

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRVIN LG+PID   +L     ++ +M     A+ R  + + F+ G++ ID      
Sbjct: 119 NMLGRVINPLGEPIDDKGALHTSHTTL-LMRPPISALKRGLINEVFEVGVKSIDGILTCG 177

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219
            GQ++G+FAGSG+GKSTL+ M  R       +I+L+GERGREV EFI   L ++L  +++
Sbjct: 178 KGQKMGIFAGSGVGKSTLMGMIVRGSNAPIKVIALIGERGREVPEFIHKNLNNDLTNTIL 237

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVATSD+SP++RK    +A+ IAEYF S G++VL I+DSITRFA + REI    GE P +
Sbjct: 238 VVATSDDSPLMRKYGAFSAMAIAEYFKSLGNDVLFIMDSITRFAMAQREIGLALGEPPTS 297

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SV + LP+L+ER G  E   G+ITA  +VLV+GD+ +DP+AD  RSILDGHIVLN
Sbjct: 298 KGYPPSVLTLLPQLMERAGK-EDGVGSITAFFTVLVEGDDLSDPVADQSRSILDGHIVLN 356

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R L + G YPP++ L S SR+ +   S +  +++     L    +E   +  IG Y+ G 
Sbjct: 357 RDLTDMGIYPPINILNSASRVINDIISPEHLQVIRKFRRLYSLLKENEVLIRIGAYQRGA 416

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
           D  LD+A+ +  ++  FLKQ  ++  S E  FQE+   ++
Sbjct: 417 DKELDEAITKRSLMESFLKQEMNEQWSFERSFQELLHIME 456


>gi|268680771|ref|YP_003305202.1| flagellar protein export ATPase FliI [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618802|gb|ACZ13167.1| flagellar protein export ATPase FliI [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 434

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 165/436 (37%), Positives = 242/436 (55%), Gaps = 9/436 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQV 62
           L+ L    +   K+L    G I+ I+S       L     +GD V     +SD   LG V
Sbjct: 3   LQRLRHKLQ--EKSLSPMFGTITKISSTTIEACGLRP--SIGDIVNIVSLDSDKNELGMV 58

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
             ++ +  +I P G  E   +GD VF   +   I       GRV++   +P DG  ++G 
Sbjct: 59  TEVDRNAFFISPFGFIEGFKIGDKVFISEQGMMIPVGEELLGRVVDPFIRPKDGKGAIG- 117

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              S  IM      M R  + + F  G++ ID       GQ++G+FAGSG+ KSTL+ M 
Sbjct: 118 ARSSASIMKAPLDPMKRGLINEPFCVGVKTIDGLLTCGKGQKMGIFAGSGVDKSTLMGMI 177

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            R       +++L+GERGREV EFIE  LG NL+ +V++VATSD+SP++RK    +A+++
Sbjct: 178 VRGSEAPIKVVALIGERGREVPEFIEKNLGGNLENTVIIVATSDDSPLMRKYGAFSAMSV 237

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF ++G +VL ++DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E
Sbjct: 238 AEYFKNQGRDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLALLPQLMERAGKEE 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 298 G-KGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSRELTDYGIYPPINIQNSASRVM 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                 + KK       L    +E   +  IG Y  G D  LD A+ +   +  FL+Q+P
Sbjct: 357 GDVIETEHKKAAMRFKRLNSILKENEVLIRIGAYEKGNDKELDLAISKKEKMNSFLQQAP 416

Query: 422 SDLSSEDVFQEITKKL 437
            ++   +      K++
Sbjct: 417 EEVVPFETTVSELKQI 432


>gi|157145265|ref|YP_001452584.1| flagellum-specific ATP synthase [Citrobacter koseri ATCC BAA-895]
 gi|157082470|gb|ABV12148.1| hypothetical protein CKO_01002 [Citrobacter koseri ATCC BAA-895]
          Length = 456

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 161/437 (36%), Positives = 241/437 (55%), Gaps = 19/437 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + ++     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQDGTETREVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E I  G  V+           G+ ++       GRV++  GKP+DG  +
Sbjct: 75  QRLFLMPLEEVEGILPGARVYAKNIAGEGLQSGK-QLPLGPALLGRVLDGGGKPLDGLPA 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  ++++    + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITQPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGADGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      +      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL
Sbjct: 373 SRAMTSLITEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEAFL 432

Query: 418 KQSPSDLSS-EDVFQEI 433
           +Q   + +  ED  Q +
Sbjct: 433 QQGIFERADWEDSLQAL 449


>gi|83319474|ref|YP_424077.1| F0F1 ATP synthase subunit alpha [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|313665017|ref|YP_004046888.1| ATP synthase F1, alpha subunit [Mycoplasma leachii PG50]
 gi|115312252|sp|Q2ST36|ATPA_MYCCT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|83283360|gb|ABC01292.1| ATP synthase F1, alpha subunit [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|312950043|gb|ADR24639.1| ATP synthase F1, alpha subunit [Mycoplasma leachii PG50]
          Length = 525

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++  E + +   +Y+K +V  + G + S+      +  L   +  G+ ++    +++  
Sbjct: 5   IKEISEMIEKQIRNYNKEVVQTEQGTVVSVGDGIALIYGLDNAIM-GELLLF---SNNVY 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDS 118
           G V+ +    V    +G    I  GD+V    +           GRVI+ALG+PID    
Sbjct: 61  GMVLNLEEGAVGSVILGDETLIREGDIVKRTNKVVETPVGDALLGRVIDALGQPIDNLGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +     +  +       M R+ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 IDFTK-TRPVERVATSVMARKSVSQPLETGILAIDSAIPIGKGQRELIIGDRQTGKTAIA 179

Query: 179 SMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +      K I   +G++   + + +E +        +VVV A + +   L+ ++P
Sbjct: 180 IDAIINQKNRNVKCIYVAIGQKDSTIVQVVEKFKKYGAMDYTVVVNAGASQPASLQYLSP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T +TIAE +   G++VL++ D +T+ A S RE++      P    YP  VF    RLLE
Sbjct: 240 YTGITIAEEWMESGNDVLIVYDDLTKHAVSYREMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +    G+ITA+  +     + +  I  +V SI DG I L+  L  +G  P VD 
Sbjct: 300 RAARVNENYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLSSELFNQGVRPAVDI 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E         +   +D      + Q   I
Sbjct: 360 GPSVSRVGSAAQIKSIKQVSGTLKLELAQYYELE---SFAKFGSDLDETTKATLDQGAKI 416

Query: 414 YDFLKQSPSDLSSE 427
              L Q   +   +
Sbjct: 417 IQMLIQKQFNPLEQ 430


>gi|268609172|ref|ZP_06142899.1| ATP synthase [Ruminococcus flavefaciens FD-1]
 gi|268609607|ref|ZP_06143334.1| ATP synthase [Ruminococcus flavefaciens FD-1]
          Length = 676

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 108/427 (25%), Positives = 181/427 (42%), Gaps = 15/427 (3%)

Query: 5   LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L    +D+  K+     G+I+ +     +V  ++  V  G+ V  +       G V 
Sbjct: 187 ISVLKTEVKDFEVKSGATATGFITRLGDGIASVHGMN-SVMYGELVEFENG---VRGIVQ 242

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V +  +G    ++ G  V   G R  +  S    GRV++ALG PIDG   + K 
Sbjct: 243 NLEEKSVGVVLLGDDHGLTEGSSVVRTGKRAGVGVSDELLGRVVDALGAPIDGLGDI-KA 301

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  + P  + R+ V    +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 302 DDYFPIEREAPGVIERKSVNVPLQTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAVDTM 361

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +           SVVV A++ +    + +AP +  
Sbjct: 362 INQKGQDVICIYVAIGQKSSTVAQVVGTLKKYGAMDYSVVVCASASDPAPFQYIAPYSGT 421

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF SKG +VL+I D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 422 AMAEYFMSKGKDVLIIYDDLSKHAVAYRAMSLLLHRPPGREAYPGDVFYLHSRLLERSSR 481

Query: 300 --SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 482 LDDEHGGGSLTALPIIETLAGDISAYIPTNVISITDGQIFLESELFNSGLRPAVNYGLSV 541

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   +L   + +F+E     +   +   +D      +    ++ + L
Sbjct: 542 SRVGGAAQTKAMKKAAGNLRIDLAQFKEME---IFTQFSSELDQATTDLLDHGRMLTELL 598

Query: 418 KQSPSDL 424
           KQ   + 
Sbjct: 599 KQPLYNP 605


>gi|6561652|gb|AAF16996.1|AF197664_1 ATPase alpha subunit [Austrobaileya scandens]
          Length = 422

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 93/413 (22%), Positives = 168/413 (40%), Gaps = 23/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G    +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G    +P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTKESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSST 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 405


>gi|313905130|ref|ZP_07838499.1| flagellar protein export ATPase FliI [Eubacterium cellulosolvens 6]
 gi|313470033|gb|EFR65366.1| flagellar protein export ATPase FliI [Eubacterium cellulosolvens 6]
          Length = 434

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 164/437 (37%), Positives = 252/437 (57%), Gaps = 13/437 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNLGQVI 63
           E +++L  +     V   G I +I  +    +       +GD V    +    +   +V+
Sbjct: 3   EKVSELIRNADT--VSHIGKIENIIGLSMEASG--GKCSIGDIVEIYSEEMGREVAAEVV 58

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                 + +        I+ G  V + G R RI       GR+INA+G+PIDG ++    
Sbjct: 59  GFRDGRLQLMTYESNNGITSGSFVRNTGHRLRIPVGEFLKGRIINAIGEPIDGKEAFPCN 118

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                + S     ++R  +      G++ ID    +  GQRIG+FAGSG+GKSTLL M A
Sbjct: 119 CDFYTVNSGYSNPLSRPPIRNRLNMGVKAIDGLNTIGKGQRIGIFAGSGVGKSTLLGMIA 178

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D  +I+LVGERGREV EF+  D   + +K++V+VVATSD+  ++R  APL A TI
Sbjct: 179 KNVTSDLNVIALVGERGREVLEFVERDLGPEGMKRTVLVVATSDQPSMMRLKAPLVATTI 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TRFA + REI   +GE P+ARGY  S++SE P+LLER G  +
Sbjct: 239 AEYFRDQGMDVLLMMDSLTRFAMAQREIGLATGEPPIARGYTPSIYSEFPKLLERAGQFK 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+IT + +VLV+GD+ N+PIAD+VR ILDGHIVL+R+LA +  YP +D  AS+SRL 
Sbjct: 299 K--GSITGIYTVLVEGDDTNEPIADTVRGILDGHIVLSRALAAQNHYPAIDIGASISRLM 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  S + +K+ S + +++  +++  D+  IG Y+ G +  LD+AV +   I  FL Q  
Sbjct: 357 VELVSPEHRKMASRMRNILGIYQKNADLIAIGAYKKGKNPALDEAVEKYGAINRFLMQGT 416

Query: 422 SDLSSEDVFQEITKKLQ 438
            +      ++E  + + 
Sbjct: 417 QESF---TYEETLEAMH 430


>gi|227487991|ref|ZP_03918307.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227542633|ref|ZP_03972682.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092082|gb|EEI27394.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181831|gb|EEI62803.1| F0F1 ATP synthase subunit alpha [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 549

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 108/449 (24%), Positives = 194/449 (43%), Gaps = 28/449 (6%)

Query: 6   ETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E+Y+ +        + G I S       V+ L   V   + +         +G
Sbjct: 9   DEIRSAIENYTSSYSPGATREEVGQIISAADGIAQVSGL-PSVMSNELLEFPNG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D + +  +G  E +  GD V   G    I     + GRVIN LG+PID    +
Sbjct: 65  VAQNLDTDSIGVVILGDFEILKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDALGDI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            + + +  +  + P  + RQ VE+  +TG++ ID  TP+  GQR  +      GK     
Sbjct: 125 -EAEENRALELQAPSVLQRQPVEEPLQTGMKAIDAMTPIGRGQRQLIIGDRKTGKTAICI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +             + + +V A + +S 
Sbjct: 184 DTILNQKANWESGDKTKQVRCIYVAIGQKGSTIAGVRRTLEEHGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  KG++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFSGAALGQHWMYKGNHVLIIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      + G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+  +L   +  +   RD+     +   +D    K 
Sbjct: 364 VRPAVNVGVSVSRVGGAAQTKGMKKVSGNLRLDLAAY---RDLEAFAAFASDLDAASKKQ 420

Query: 407 VHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
           + +   + + LKQ  ++ ++ ED    I 
Sbjct: 421 LARGERLVELLKQKENNPMAVEDQMVSIW 449


>gi|57237200|ref|YP_178212.1| flagellum-specific ATP synthase [Campylobacter jejuni RM1221]
 gi|57166004|gb|AAW34783.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni RM1221]
 gi|315057632|gb|ADT71961.1| Flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 461

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 163/436 (37%), Positives = 239/436 (54%), Gaps = 6/436 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV 62
           NLE L        +NL    G I+ I++    +  L   V  +   V ++ +N + L  V
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++ +
Sbjct: 60  VEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI-E 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 VTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+++
Sbjct: 179 VKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSV 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E
Sbjct: 239 AEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEE 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 299 G-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P
Sbjct: 358 SDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+  ++
Sbjct: 418 EESFEFNQTLELLSQI 433


>gi|255657422|ref|ZP_05402831.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-23m63]
 gi|296449018|ref|ZP_06890808.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP08]
 gi|296879841|ref|ZP_06903814.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP07]
 gi|296262111|gb|EFH08916.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP08]
 gi|296429130|gb|EFH15004.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP07]
          Length = 464

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 116/410 (28%), Positives = 189/410 (46%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
              G +  I      V   S+     L + +V +  + + + +V   I  D V    +  
Sbjct: 2   ANVGKVVQIVGAVLDVKFDSEQSLPNLLNALVIKLGDKEIVAEVAQHIGDDTVRCIAMSA 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LGKP+DG  +  K    + I    P   
Sbjct: 62  TDGLVRGMEVVDTGGPISVPVGDETLGRIFNVLGKPVDGKPA-PKSAPKLPIHRPAPAYD 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
             +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + S
Sbjct: 121 ELETTAEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFS 180

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AE+F  +   +
Sbjct: 181 GVGERTREGNDLYGEMSESGVINKTALVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V 
Sbjct: 241 VLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  S LD   VL+R ++  G YP VDPL S SR+ D      +  
Sbjct: 299 AVYVPADDLTDPAPATTFSHLDAKTVLSRQISSLGIYPAVDPLESTSRILDPSIVGKEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ R++E +DI  I G     D      V +   I  FL QS
Sbjct: 359 EVARGVQSILQRYKELQDIIAILGMDELSDED-KLIVARARKIQRFLSQS 407


>gi|163789297|ref|ZP_02183739.1| ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase)
           [Flavobacteriales bacterium ALC-1]
 gi|159875512|gb|EDP69574.1| ATP synthase, subunit alpha (H(+)-transporting two-sector ATPase)
           [Flavobacteriales bacterium ALC-1]
          Length = 526

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/454 (22%), Positives = 171/454 (37%), Gaps = 38/454 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q    +     + + G + ++         L+     G+ V   G      G V+ 
Sbjct: 11  AILKQQLSGFEAGASLDEVGTVLTVGDGIVRAYGLA-NAQYGELVEFDGGAE---GIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I  +G    +  G  V    R   +       GRV++ LG PIDG   +    
Sbjct: 67  LEEDNVGIVLLGTSVGVKEGSTVKRTSRIASVKVGEGIVGRVVDTLGNPIDGKGPIEGET 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK+T+      
Sbjct: 127 YEMPVERKAPGVIYREPVTEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKTTVCIDTIL 186

Query: 184 SDCF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +             I   VG++   V    +          + +V A + +   ++  AP
Sbjct: 187 NQKEFYDAGNPVYCIYVAVGQKASTVANIAKTLEERGALAYTTIVAANASDPAAMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           +T  +I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 247 MTGASIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RSAKVINDDNIAKEMNDLPDSLKPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L     +F E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQFRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSED 428
              +D      + +     + LKQ+ +D  + ED
Sbjct: 424 GSDLDASTLNVIEKGKRNVEILKQAQNDPFTVED 457


>gi|82597098|ref|XP_726538.1| ATP synthase F1 subunit alpha [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481982|gb|EAA18103.1| ATP synthase F1, alpha subunit [Plasmodium yoelii yoelii]
          Length = 548

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/434 (23%), Positives = 185/434 (42%), Gaps = 23/434 (5%)

Query: 6   ETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG---KNSDNLGQ 61
           + L +  E++  K    + GY+ S+         L+  V   + V       K++   G 
Sbjct: 42  KILEKKFENFDFKTSANEVGYVLSVGDGICRAFGLN-NVKSSELVEIHNEEDKSNITYGM 100

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              +  D V I   G    I  GD++    R           GRV++ALG  IDG+  + 
Sbjct: 101 ATNLEYDNVGIVIFGNDRNIKEGDIIKRTNRIIDVNVGYELLGRVVDALGNEIDGEKKIE 160

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG------- 173
             +   +I  K P  + R+ V +   TGI+ ID   P+  GQR  +      G       
Sbjct: 161 TKE-RRKIEVKAPGIIARKSVNESIITGIKCIDSLVPIGRGQRELIIGDRQTGKTAIAID 219

Query: 174 ---KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
                  ++     +     +   +G++   + + +      D LK +++V +++ ++  
Sbjct: 220 AIIHQKNINDKVPDNEKVYCVYVAIGQKKSNIAKLVNLLKKYDALKYTIIVNSSASDASP 279

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP T   +AE+F  +G++ L+I D +++ A + R+++      P    YP  +F  
Sbjct: 280 LQFLAPYTGCAMAEFFRDRGNHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDIFYI 339

Query: 290 LPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             +LLER        + G++TA+  +    ++ +  I  +V SI DG I L   L  +G 
Sbjct: 340 HSKLLERSSKLNDSLKGGSLTALPVIETLNNDVSAYIPTNVISITDGQIFLESELFYKGI 399

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     KKL SS+   + +F E   I     +   +D    K +
Sbjct: 400 IPAINVGLSVSRIGSSAQYKCMKKLASSMKLELAQFRE---IVAFSQFGSDLDASTKKLI 456

Query: 408 HQVPIIYDFLKQSP 421
            +  I+ + LKQ  
Sbjct: 457 EKGKILTEILKQKQ 470


>gi|330862417|emb|CBX72576.1| putative secretion system apparatus ATP synthase ssaN [Yersinia
           enterocolitica W22703]
          Length = 451

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 161/402 (40%), Positives = 224/402 (55%), Gaps = 10/402 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G I  +             V LG+         D L +V+ I      + P     
Sbjct: 27  IESCGPILDVGPTLLRAHL--PGVALGELCRITSP--DMLAEVVAIEQQTALLSPFASSA 82

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  +   G   R+       GRV++ LG+PID    L       E+    P  + R
Sbjct: 83  GLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPIDAGPPLRGH--WRELDCPPPDPLTR 140

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q V++   TGIR ID       GQRIG+FA +G+GKS+LLSM  R    D ++++L+GER
Sbjct: 141 QPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVGKSSLLSMLCRGCRADIIVLALIGER 200

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G  VLL+ D
Sbjct: 201 GREVREFLEQVLTPETRARTVVVVATSDRPALERLKGIYTATTVAEYFRERGGKVLLMAD 260

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REI   +GE P    +PTSVF+ LPRLLER G SE  +G+ITA  +VLV+G
Sbjct: 261 SLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPRLLERAGNSE--RGSITAFYTVLVEG 318

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA+ + L   L 
Sbjct: 319 DDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAIDIAASVSRIMPQIVSAEHRALAQKLR 378

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           H+   ++E   +  +G Y+ G DL  D+A+ + P I  FL+Q
Sbjct: 379 HIQACYQEIELLVRVGEYQEGQDLQADEALQRYPGICAFLQQ 420


>gi|62182349|ref|YP_218766.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224585662|ref|YP_002639461.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|75505461|sp|Q57HX7|ATPA_SALCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808112|sp|C0Q2N4|ATPA_SALPC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|62129982|gb|AAX67685.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|224470190|gb|ACN48020.1| ATP synthase subunit A [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322716842|gb|EFZ08413.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                     G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|147674668|ref|YP_001218419.1| F0F1 ATP synthase subunit alpha [Vibrio cholerae O395]
 gi|153212976|ref|ZP_01948570.1| ATP synthase F1, alpha subunit [Vibrio cholerae 1587]
 gi|153820046|ref|ZP_01972713.1| ATP synthase F1, alpha subunit [Vibrio cholerae NCTC 8457]
 gi|153829666|ref|ZP_01982333.1| ATP synthase F1, alpha subunit [Vibrio cholerae 623-39]
 gi|255746824|ref|ZP_05420770.1| ATP synthase alpha chain [Vibrio cholera CIRS 101]
 gi|262167082|ref|ZP_06034797.1| ATP synthase alpha chain [Vibrio cholerae RC27]
 gi|14547932|sp|Q9KNH3|ATPA_VIBCH RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|172047487|sp|A5F457|ATPA_VIBC3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|124116202|gb|EAY35022.1| ATP synthase F1, alpha subunit [Vibrio cholerae 1587]
 gi|126509403|gb|EAZ71997.1| ATP synthase F1, alpha subunit [Vibrio cholerae NCTC 8457]
 gi|146316551|gb|ABQ21090.1| ATP synthase F1, alpha subunit [Vibrio cholerae O395]
 gi|148874842|gb|EDL72977.1| ATP synthase F1, alpha subunit [Vibrio cholerae 623-39]
 gi|255735581|gb|EET90980.1| ATP synthase alpha chain [Vibrio cholera CIRS 101]
 gi|262024468|gb|EEY43154.1| ATP synthase alpha chain [Vibrio cholerae RC27]
 gi|327485234|gb|AEA79641.1| ATP synthase alpha chain [Vibrio cholerae LMA3894-4]
          Length = 513

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G    +  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPIG-AKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|306788395|ref|ZP_07426717.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu004]
 gi|306967397|ref|ZP_07480058.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu009]
 gi|308335081|gb|EFP23932.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu004]
 gi|308355009|gb|EFP43860.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu009]
          Length = 600

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/438 (23%), Positives = 177/438 (40%), Gaps = 27/438 (6%)

Query: 6   ETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E+Y  +        + G +         V  L   V   + +   G     LG
Sbjct: 9   DDIQSAIEEYVSSFTADTSREEVGTVVDAGDGIAHVEGL-PSVMTQELLEFPGG---ILG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   V    +G  E I  G  V   G    +     + GRV+N LG+PIDG   +
Sbjct: 65  VALNLDEHSVGAVILGDFENIEEGQQVKRTGEVLSVPVGDGFLGRVVNPLGQPIDGRGDV 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              D    +  + P  ++RQ V++  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 D-SDTRRALELQAPSVVHRQGVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
            T+L+     +  D     + +   +G++G  +               + +V A + ES 
Sbjct: 184 DTILNQRQNWESGDPKKQVRCVYVAIGQKGTTIAAVRRTLEEGGAMDYTTIVAAAASESA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   IA+++  +G +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIAQHWMYEGKHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++T +  +    ++ +  I  +V SI DG   L   L  +G
Sbjct: 304 LHSRLLERCAKLSDDLGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E         +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELE---AFAAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDL 424
           + +   + + LKQ  S  
Sbjct: 421 LERGARLVELLKQPQSQP 438


>gi|66046683|ref|YP_236524.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257390|gb|AAY38486.1| ATPase FliI/YscN [Pseudomonas syringae pv. syringae B728a]
          Length = 452

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 156/436 (35%), Positives = 238/436 (54%), Gaps = 18/436 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +  + A+    Y++++      V  G +  +  +      L     +G   V    +
Sbjct: 1   MRLDRTSFAKRLGSYAESISLPAQPVVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDD 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINA 108
           S    +   +V+  +   V++ PVG    I+ G  V      GR          GRV++ 
Sbjct: 59  SHHPVEVEAEVMGFSGGKVFLMPVGSVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDG 116

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
            G+P+DG   + K +  + +       + R  + +    GIR I+    +  GQR+G+FA
Sbjct: 117 AGRPLDGRSPI-KAEDWVPMDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFA 175

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G+GKS LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++
Sbjct: 176 GTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDA 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R  A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF
Sbjct: 236 PLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVF 295

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP+L+ER G +EK  G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG 
Sbjct: 296 ARLPKLVERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGH 355

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  AS+SR+     S +          L  R+++TRD+  +G Y  G D   D A+
Sbjct: 356 YPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAI 415

Query: 408 HQVPIIYDFLKQSPSD 423
              P++  + +Q+  +
Sbjct: 416 ALHPVLVRYQRQALRE 431


>gi|189426350|ref|YP_001953527.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ]
 gi|189422609|gb|ACD97007.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ]
          Length = 432

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 150/427 (35%), Positives = 231/427 (54%), Gaps = 9/427 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQVIRINLDIVYICP 74
           S N +   G ++ +  +   +        +G     + K+      +V+    +   + P
Sbjct: 10  SVNPIRLHGKVTQVVGLV--IEGYCPDTSVGAICEIRPKDGVPIPAEVVGFRDNKTLLMP 67

Query: 75  VGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G    + L  L+     +  +       GRVI+ LG PID    L   D    I +   
Sbjct: 68  LGDLRGVGLDSLIAVRRDKATLRVGPGLLGRVIDGLGNPIDDKGPLHL-DEEYPIYAAPV 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M R  + +    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+
Sbjct: 127 NPMKRPPIRRPLDLGIRSINGLLTCGQGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIA 186

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGRE+REF+ +D     L KSVVVVATSD+ P++R      A TIAEYF  +G  V
Sbjct: 187 LIGERGRELREFVEKDLQEQGLHKSVVVVATSDQPPLVRMRGAYLATTIAEYFKDQGKKV 246

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+++DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G   +  G+IT + +
Sbjct: 247 LMMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGNFPE--GSITGLYT 304

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+PI+D++RSILDGHIVL+R LA    YPP+D +AS SR+         +KL
Sbjct: 305 VLVEGDDFNEPISDAMRSILDGHIVLSRDLAARNIYPPIDIMASASRVMADVADERHRKL 364

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQ 431
                  +  + ++ D+  IG Y+ G +  +D+A+ ++  +  + KQ+ +D ++  D   
Sbjct: 365 AGQFKETLATYRQSEDLINIGAYKAGSNPGIDQAIRKIDAMTAYQKQAVADPATLADSVD 424

Query: 432 EITKKLQ 438
            + +  +
Sbjct: 425 GLQRIFE 431


>gi|164685628|gb|ABY66760.1| atp1 [Paeonia sp. CWD 96.3]
          Length = 413

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|95929852|ref|ZP_01312593.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684]
 gi|95134148|gb|EAT15806.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684]
          Length = 442

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 157/429 (36%), Positives = 231/429 (53%), Gaps = 6/429 (1%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           A   +   +   G ++ I  +     C S  V     V+          +V+     +  
Sbjct: 6   ARIRACKTLRVWGKVTKIVGLVIEGYCPSASVGTLCEVIPLSGGEPIAAEVVGFRDGLAL 65

Query: 72  ICPVGIGEEISLGDL--VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
           + P+G    +  G L  V       +       GRV++A+G  IDG  S    D  M + 
Sbjct: 66  LMPLGELRGLGPGSLIRVLRT-SATMPVGDAMLGRVLDAMGHAIDGLPS-PVLDQEMPVY 123

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           S  P  M R+++      G+R I+       GQR+G+ AGSG+GKS LL   A+    D 
Sbjct: 124 SLPPGPMQRKKISDPLDLGVRAINGLLTCGRGQRMGIMAGSGVGKSVLLGTMAKHSQSDI 183

Query: 190 VIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +I+L+GERGREVREFI  D   + L +SVV+VATSD+SP+LR      A T+AEYF  +
Sbjct: 184 NVIALIGERGREVREFIERDLGEEGLARSVVLVATSDQSPLLRMRGAFVATTLAEYFCQQ 243

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G NVLL++DS+TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G  +++ G+IT
Sbjct: 244 GHNVLLMMDSVTRFAMAMREVGLAIGEPPTTKGYTPSVFATLPKLLERAGSFKEQ-GSIT 302

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + +VLV+GD+ N+PIADSVRSILDGHIVL+R LA +  YP +D L S SR+       +
Sbjct: 303 GLYTVLVEGDDMNEPIADSVRSILDGHIVLSRDLAAKNHYPCIDILHSASRVMRDIVDPE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             +  + +  ++   +E  D+  IG Y  G +  +D A+ ++  + DFL+Q   +     
Sbjct: 363 HVQSAAQIREILATHKEAEDLINIGAYVAGSNPKIDYAISRIDAVNDFLRQGMDERDDLV 422

Query: 429 VFQEITKKL 437
              E   KL
Sbjct: 423 GTVEAMTKL 431


>gi|327481266|gb|AEA84576.1| flagellum-specific ATP synthase [Pseudomonas stutzeri DSM 4166]
          Length = 452

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 157/443 (35%), Positives = 242/443 (54%), Gaps = 18/443 (4%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K  ET     +  S+ L+   G +  +  +      L     +G   +    +S    + 
Sbjct: 10  KRFETYEAAIKLPSQPLL--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPTEV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   +Y+ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 66  EAEVMGFSSGKLYLMPVGSLAGIAPGARVVPLVNTGRL--PMGMSMLGRVLDGAGRALDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D  + +   V   + R  + +    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 KGGMRAEDW-VPMDGPVINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ L+GERGREV+EFIE+ LG+   K+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEADIIVVGLIGERGREVKEFIENILGEESIKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+
Sbjct: 243 AQYCTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +E+  G+ITA  +VL +GD+  DPIAD+ R +LDGHIVL+R LAEEG YP +D  
Sbjct: 303 ERAGNAEQGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+  +  SA+  +       L  R++++RD+  +G Y PG D   D A+ +   + 
Sbjct: 363 ASISRVMPQVVSAEHVRASQRFKQLWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMV 422

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            +L+Q   +    +   +   +L
Sbjct: 423 SYLRQGLDE---SEGLSQSAAQL 442


>gi|107023998|ref|YP_622325.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia AU
           1054]
 gi|116691085|ref|YP_836708.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           HI2424]
 gi|105894187|gb|ABF77352.1| Flagellar protein export ATPase FliI [Burkholderia cenocepacia AU
           1054]
 gi|116649174|gb|ABK09815.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           HI2424]
          Length = 513

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 152/441 (34%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A  +    +   G ++    +      L   + +G     +      L     +V+    
Sbjct: 70  ARSHRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFAG 127

Query: 68  DIVYICPVGIGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDD 117
           D +++ P      +  G  V+            G  R+       GRV++A G+P+DG  
Sbjct: 128 DRLFLMPTTDVAGVLPGARVWPRESAPVTDPLAGAKRLPVGWEMLGRVVDASGRPLDGLG 187

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 188 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 246

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 247 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 306

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 307 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 366

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 367 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 426

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 427 ISRAMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 486

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 487 LQQGFRECA---PFASSLTAL 504


>gi|12659345|gb|AAG60207.1| ATPase alpha subunit [Akebia quinata]
          Length = 413

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGPSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVKILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|330953751|gb|EGH54011.1| flagellum-specific ATP synthase [Pseudomonas syringae Cit 7]
          Length = 452

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 156/436 (35%), Positives = 235/436 (53%), Gaps = 18/436 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+    + A+    Y++++      V  G +  +  +      L     +G   V    +
Sbjct: 1   MRLERTSFAKRLGSYAESISLPAQPVVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDD 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINA 108
           S    +   +V+  +   V++ PVG    I+ G  V      GR          GRV++ 
Sbjct: 59  SHHPVEVEAEVMGFSGSKVFLMPVGSVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDG 116

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
            G+P+DG   + K +  + +       + R  + +    GIR I+    +  GQR+G+FA
Sbjct: 117 AGRPLDGRSPI-KAEDWVPMDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFA 175

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G+GKS LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++
Sbjct: 176 GTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDA 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R  A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF
Sbjct: 236 PLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVF 295

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP+L+ER G +E   G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG 
Sbjct: 296 ARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGH 355

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  AS+SR+     S +          L  R+++TRD+  +G Y  G D   D A+
Sbjct: 356 YPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAI 415

Query: 408 HQVPIIYDFLKQSPSD 423
              P++  + +Q   D
Sbjct: 416 ALHPVLVRYQRQGLRD 431


>gi|254445953|ref|ZP_05059429.1| flagellar protein export ATPase FliI [Verrucomicrobiae bacterium
           DG1235]
 gi|198260261|gb|EDY84569.1| flagellar protein export ATPase FliI [Verrucomicrobiae bacterium
           DG1235]
          Length = 440

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 163/420 (38%), Positives = 241/420 (57%), Gaps = 10/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G ++ +T +            LG+       G +     +V+      + + P+G    +
Sbjct: 26  GKVAQVTGLIIESEG--PQASLGEVCEISSPGTSVKVFAEVVGFREQRILLMPLGDVAGV 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V     F +I       GRV++ +G+PIDG   +   D    +  KVP  + R+R
Sbjct: 84  HPGCDVKLSSGFNKIPSGNEVLGRVVDGMGRPIDGIGPMHYQD-PGSMTGKVPNPLLRKR 142

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +   F TG++ ID+F+P+  GQR+GVFAGSG+GKSTLL M AR    D  +I+LVGERGR
Sbjct: 143 ITVPFNTGVKAIDLFSPVGEGQRMGVFAGSGVGKSTLLGMLARGSNADVNVIALVGERGR 202

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           E+REFI +D   + + ++VVVVATSD+S  +R  A   A +IAE F   G  VL ++DS+
Sbjct: 203 ELREFIEKDLGPEGMARTVVVVATSDQSAPMRLRAANMATSIAENFRDSGKRVLFLMDSV 262

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + REI    GE P +RGY  SVFS LPRLLER G S+K  G ITA  +VLV+GD+
Sbjct: 263 TRFAMAQREIGLAVGEPPASRGYTPSVFSTLPRLLERSGNSDK--GTITAFYTVLVEGDD 320

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PIAD+VR ILDGHIVL+R LA    +P +D L S+SRL +   + +E          
Sbjct: 321 LNEPIADAVRGILDGHIVLSRQLATANHFPAIDVLESISRLRNDISTEEELATAGLARDY 380

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
           +  + +  DI  +G Y  G +  +D A+     + ++LKQS ++ +  E+ +Q++ + ++
Sbjct: 381 LALYRKNEDIVNLGAYVRGANQKIDAAIIANERVMNYLKQSYTECVPREECYQKLAELIR 440


>gi|256003257|ref|ZP_05428249.1| ATP synthase F1, alpha subunit [Clostridium thermocellum DSM 2360]
 gi|281418493|ref|ZP_06249512.1| ATP synthase F1, alpha subunit [Clostridium thermocellum JW20]
 gi|255992948|gb|EEU03038.1| ATP synthase F1, alpha subunit [Clostridium thermocellum DSM 2360]
 gi|281407577|gb|EFB37836.1| ATP synthase F1, alpha subunit [Clostridium thermocellum JW20]
 gi|316939254|gb|ADU73288.1| ATP synthase F1, alpha subunit [Clostridium thermocellum DSM 1313]
          Length = 506

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 175/423 (41%), Gaps = 16/423 (3%)

Query: 6   ETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  + Y +K+ V   GY+         V  L+  +  G+ +  +       G  + 
Sbjct: 10  AIIKQQIDKYGNKSHVDDVGYVLQAGDGIARVYGLNNCMS-GELLEFENG---VFGMAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D +         ++  G LV   G+   +       GRVI+ LG P+DG   + K +
Sbjct: 66  LEEDNIGCVLFRGERDVKEGTLVKRTGKTVEVPVGNSLIGRVIDPLGNPLDGKGKI-KTE 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 125 KFRPIEYPAPSVMDRKPVNRPLQTGIMAIDAMVPIGRGQRELIIGDRQTGKTAIAVDTIL 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        I   +G++   V E I           +VVV +T+ E P L+ +AP    +
Sbjct: 185 NQKGKDVICIYVAIGQKASSVAEVINTLEEGGAMEYTVVVSSTASEMPTLQYIAPYAGCS 244

Query: 241 IAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           IAE F      +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 245 IAEEFMYNDHKDVLIVYDDLSKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERAAQ 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SV
Sbjct: 305 LSDELGGGSITALPIIETQVGDVSAYIPTNVISITDGQIYLETELFYSGQRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  +L   + ++ E     +   +   +D +    + Q   + + L
Sbjct: 365 SRVGGAAQIKAMKKVAGALRINLAQYREL---AVFAQFGSDLDKVTKDKLIQGERLVESL 421

Query: 418 KQS 420
           KQS
Sbjct: 422 KQS 424


>gi|156144842|gb|ABU52982.1| ATP synthase subunit 1 [Silene noctiflora]
          Length = 386

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/394 (23%), Positives = 161/394 (40%), Gaps = 23/394 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L + +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVISVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G    +       GRV+ ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPVGKAMLGRVVEALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKLLNSKASSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     +    S++V AT+ +   L+ +AP +   + EYF     
Sbjct: 176 YVAIGQKRSTVAQLVQILSEAHAMDYSILVAATASDPAPLQFLAPYSGCAMGEYFLDNKM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPIIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            K++  SL   + ++ E   +     +   +D  
Sbjct: 356 MKEVCGSLKLELAQYRE---VAAFAQFGSDLDAA 386


>gi|262392802|ref|YP_003284656.1| ATP synthase subunit alpha [Vibrio sp. Ex25]
 gi|114533|sp|P12985|ATPA_VIBAL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|48337|emb|CAA34179.1| unnamed protein product [Vibrio alginolyticus]
 gi|262336396|gb|ACY50191.1| ATP synthase alpha chain [Vibrio sp. Ex25]
          Length = 513

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  ++  +    P  ++R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPI-EAKMTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D     I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|302878296|ref|YP_003846860.1| flagellar protein export ATPase FliI [Gallionella capsiferriformans
           ES-2]
 gi|302581085|gb|ADL55096.1| flagellar protein export ATPase FliI [Gallionella capsiferriformans
           ES-2]
          Length = 500

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 154/442 (34%), Positives = 232/442 (52%), Gaps = 28/442 (6%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           N +   G+++ +T +      L   + +G     +  N+    +V+  + + +++ P   
Sbjct: 57  NPMPPSGHLTKVTGLIMEAVGL--QMPVGSTCQIRLPNTTVEAEVVGFSGEKLFLMPEND 114

Query: 78  GEEISLGDLVFHWGRFR---------------------ISPSACWCGRVINALGKPIDGD 116
              +  G  V                            +       GRV++  GKP+D  
Sbjct: 115 VYGLVPGARVMPITPLHTLSLAGKRKPLRRRMSDHAKHLPVGNMLLGRVLDGAGKPLDQL 174

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L +   S  + S+    + R  ++     G+R I+    +  GQR+G+FAGSG+GKS 
Sbjct: 175 GPLLET-ASAPLQSRPFNPLERASIDTPLDVGVRAINALLSVGRGQRMGLFAGSGVGKSV 233

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
           LL M AR    D  ++ L+GERGREV+EFI D LG + + +SVVV   +D SP++R    
Sbjct: 234 LLGMMARYTSADVTVVGLIGERGREVKEFINDILGPEGMARSVVVATPADTSPLMRLQGT 293

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A TIAEYF  +G NVLLI+DS+TRFA + REIA   GE P  +GYP SVF++LP+L+E
Sbjct: 294 AYATTIAEYFRDQGKNVLLIMDSLTRFAMAQREIALAVGEPPATKGYPPSVFAKLPQLVE 353

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R L E+G YP +D  A
Sbjct: 354 RAGNGLEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLVEQGHYPAIDIEA 413

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+  +  + +   LV     L   ++  RD+  +G Y  G D +LD+A+   P +  
Sbjct: 414 SISRVMSRLATPEHAALVQRFKQLYAHYQRNRDLISVGAYINGSDPLLDEAIKLYPKMEQ 473

Query: 416 FLKQSPSDLSSEDVFQEITKKL 437
           FLKQ        + +     +L
Sbjct: 474 FLKQGMHQC---ETYTSSIAQL 492


>gi|256823843|ref|YP_003147806.1| ATP synthase F1 subunit alpha [Kangiella koreensis DSM 16069]
 gi|256797382|gb|ACV28038.1| ATP synthase F1, alpha subunit [Kangiella koreensis DSM 16069]
          Length = 515

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 182/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   +++L ++   +  V       G I S++     +  L+  V  G+ +   G   
Sbjct: 4   QLNPSEISELIKNRIDSFEVVSEARNEGTIVSVSDGILRIHGLTD-VMAGEMIELPGG-- 60

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G   +I  G      GR   +       GRV++ALG PIDG
Sbjct: 61  -KYGMALNLERDSVGAVVLGDYTDIVEGMTAKCTGRILEVPVGRGLLGRVVDALGNPIDG 119

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + + D    +    P  + R+ V++  +TGI+ ID   P+  GQR  +      GK+
Sbjct: 120 KGPI-ENDGFSPVEKIAPGVIERKSVDQPVQTGIKSIDAMIPVGRGQRELIIGDRQTGKT 178

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +        +   VG++   V   +           +++V AT+ ++  L+ 
Sbjct: 179 AIAVDAIINQKGTGVICVYVAVGQKASTVAGIVRKLEEHGAMDHTIIVAATASDAAALQF 238

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 239 IAPFAGCTMGEYFRDRGEDGLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 298

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 299 LLERASRINAEHVEKITNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 358

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 359 TDLFNAGIRPAVNAGLSVSRVGGAAQTKIIKKLGGGVRLALAQYRE---LAAFAQFASDL 415

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 416 DDATRAQLEHGQRVTELMKQHQYAPLS 442


>gi|34539409|gb|AAQ74588.1| F1-ATPase alpha subunit [Philydrum lanuginosum]
          Length = 416

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 165/408 (40%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGASESDTLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|242278623|ref|YP_002990752.1| ATPase, FliI/YscN family [Desulfovibrio salexigens DSM 2638]
 gi|242121517|gb|ACS79213.1| ATPase, FliI/YscN family [Desulfovibrio salexigens DSM 2638]
          Length = 437

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 159/422 (37%), Positives = 227/422 (53%), Gaps = 11/422 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
              G +S +  +            LG     + +   S    +V+          P G  
Sbjct: 18  RSYGRVSKVVGLIA--EGKGIKAPLGSVCQLIPEEAESPIAAEVVGFRDGACLFMPYGEM 75

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             IS G L+ +     ++       GR ++A G+PIDG   +   D    +    P  + 
Sbjct: 76  HGISPGSLIENSKTPPKVPVGMNLLGRAVDAFGEPIDGKGPIIP-DAYNPLHRDPPNPLE 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R+ +    G++ I+    L  GQR+G+ AGSG+GKSTLLSM AR    D  +I+L+GE
Sbjct: 135 RPRINEPLDVGVKAINGLLTLGKGQRMGIMAGSGVGKSTLLSMMARYTVADINVIALIGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EFI  D   + L +SV+V+ATSD+SP++R  A  TA  IAEYF     +VLL++
Sbjct: 195 RGREVVEFIERDLGPEGLARSVLVIATSDKSPLIRLRAAYTATAIAEYFRDLNKDVLLMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   +GE P   GY  SVF++LP+LLER G +    G+IT V +VLVD
Sbjct: 255 DSVTRFAMAGREVGLAAGEPPTRGGYTPSVFAQLPKLLERAGKNPN--GSITGVYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+  +PIAD+VRSILDGHIVL R LA++G YP +D L SVSR+       D       +
Sbjct: 313 GDDFTEPIADAVRSILDGHIVLTRDLADQGHYPCIDVLKSVSRVRGDIVQNDIVAAGRKV 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
              +  F +  D+  IG Y+ G +  +D A+  VP I  FL+Q   D  + D  +   K 
Sbjct: 373 LGQLATFRKVEDMVNIGAYQKGANPEIDTAIKMVPAINGFLQQLVEDKQTID--ESFAKL 430

Query: 437 LQ 438
           ++
Sbjct: 431 ME 432


>gi|94500272|ref|ZP_01306805.1| flagellum-specific ATP synthase [Oceanobacter sp. RED65]
 gi|94427571|gb|EAT12548.1| flagellum-specific ATP synthase [Oceanobacter sp. RED65]
          Length = 469

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 165/439 (37%), Positives = 244/439 (55%), Gaps = 7/439 (1%)

Query: 4   NLETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
            L+TL  +AE +  K+  V  G ++ +     T+  +   V +GD    +  +     QV
Sbjct: 10  KLKTLKWIAERHQFKSQPVVSGRLTRMVG--LTLEAVGCNVKVGDRCHVEQGSEFIEAQV 67

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +  + D  ++ PV     +S G  V        I       GRVIN  GKP+DG   L  
Sbjct: 68  VGFDEDKFFLMPVEPANSLSPGAKVTPILDSAEIPVGDMLLGRVINGAGKPLDGKGDLVS 127

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            + ++ +   +   M R  + +    GIR I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 128 QN-TLNLDGSIINPMQRAPIRQTMDVGIRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMM 186

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVT 240
            R    D +++ LVGERGREV+EFI+D LG+   K +VVV + +D+SP++R  A   +  
Sbjct: 187 TRFSTADIIVVGLVGERGREVQEFIQDILGEEGMKRAVVVASPADDSPVMRMRAADLSTA 246

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G +VLL++DS+TR+  + REIA   GE P  +GYP SVF+++P+L+ER G  
Sbjct: 247 IAEYFRDEGKDVLLLMDSLTRYGQAQREIALAVGEPPATKGYPPSVFAKIPKLVERAGNG 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL R LAEEG+YP +D  AS+SR 
Sbjct: 307 PEGGGSITAFYTVLTEGDDLQDPIADSARAILDGHVVLARRLAEEGQYPAIDIEASISRA 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S    +      HL   + +  D+  +G Y PG +  LD AV   PI+  F+ Q 
Sbjct: 367 MPQIVSKASLQNAQKFKHLYSLYRQNMDLISVGAYSPGNNPELDHAVRLHPIMRTFIMQE 426

Query: 421 PSD-LSSEDVFQEITKKLQ 438
             + +S  D  + +   LQ
Sbjct: 427 LDESMSLADSQEGLDLILQ 445


>gi|86153685|ref|ZP_01071888.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85842646|gb|EAQ59858.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 461

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 163/436 (37%), Positives = 240/436 (55%), Gaps = 6/436 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV 62
           NLE L        +NL    G I+ I++    +  L   V  +   V ++ +N + L  V
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++ +
Sbjct: 60  VEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI-E 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 ATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+++
Sbjct: 179 VKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSV 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E
Sbjct: 239 AEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEE 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 299 G-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S++ K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P
Sbjct: 358 SDIISSEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+  ++
Sbjct: 418 EESFEFNQTLELLSQI 433


>gi|34539363|gb|AAQ74565.1| F1-ATPase alpha subunit [Maranta leuconeura]
          Length = 413

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 166/405 (40%), Gaps = 19/405 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAILGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------KVIISLVGERG 199
           TG++ +D   P+  GQR  +      GK+ +      +             +   +G++ 
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRAETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 397


>gi|206558923|ref|YP_002229683.1| flagellum-specific ATP synthase FliI [Burkholderia cenocepacia
           J2315]
 gi|18182541|gb|AAL65163.1|AF453480_5 flagellar ATPase [Burkholderia cepacia]
 gi|198034960|emb|CAR50832.1| flagellum-specific ATP synthase FliI [Burkholderia cenocepacia
           J2315]
          Length = 501

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 152/441 (34%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A  +    +   G ++    +      L   + +G     +      L     +V+    
Sbjct: 58  ARSHRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFAG 115

Query: 68  DIVYICPVGIGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDD 117
           D +++ P      +  G  V+            G  R+       GRV++A G+P+DG  
Sbjct: 116 DRLFLMPTTDVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDGLG 175

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 176 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 234

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 235 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 294

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 295 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 354

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 355 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 414

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 415 ISRAMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 474

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 475 LQQGFRECA---PFASSLTAL 492


>gi|34539353|gb|AAQ74560.1| F1-ATPase alpha subunit [Lanaria lanata]
          Length = 388

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/389 (23%), Positives = 162/389 (41%), Gaps = 22/389 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 7   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 63

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 64  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 122

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 123 LIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 182

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 183 ALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 243 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 303 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSLKLELAQYRE---VA 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
               +   +D      +++   + +  KQ
Sbjct: 360 AFAQFGSDLDAATQALLNRGARLTEVPKQ 388


>gi|329296423|ref|ZP_08253759.1| F0F1 ATP synthase subunit alpha [Plautia stali symbiont]
          Length = 513

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSADYVERFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A     KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQIKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|34539249|gb|AAQ74508.1| F1-ATPase alpha subunit [Cercidiphyllum japonicum]
          Length = 417

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|34539359|gb|AAQ74563.1| F1-ATPase alpha subunit [Macropiper excelsum]
          Length = 416

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 168/411 (40%), Gaps = 23/411 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 403


>gi|319441097|ref|ZP_07990253.1| F0F1 ATP synthase subunit alpha [Corynebacterium variabile DSM
           44702]
          Length = 544

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 189/448 (42%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G ++        V+ +   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSTSAEASREEVGVVTMAADGIAQVSGM-PSVMTNELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  ++
Sbjct: 65  VAQNLETDSVGVVVLGHFESLKEGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLGTI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 EAEEDRV-LELQAPSVLQRQPVHEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTSVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
            T+L+        DK      I   +G++G  +    +       L+ + +V A + +S 
Sbjct: 184 DTILNQRENWASGDKTKQVRCIYVAIGQKGSTIASVRKTLEDKGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALGQHWMYQGAHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++TA+  +    ++    I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERAAKLSDELGSGSMTALPIIETKANDVGAFIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  +L   +  +   RD+     +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGDAQTKGMKKVAGNLRLDLAAY---RDLEAFATFASDLDEYSKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDL-SSEDVFQEI 433
           + +   + + LKQ+ ++  + ED    I
Sbjct: 421 LDRGERLVELLKQNETEPQAVEDQMVSI 448


>gi|149188273|ref|ZP_01866567.1| F0F1 ATP synthase subunit alpha [Vibrio shilonii AK1]
 gi|148837862|gb|EDL54805.1| F0F1 ATP synthase subunit alpha [Vibrio shilonii AK1]
          Length = 512

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L  +   N          G I S++    T+  L+     G+ +      
Sbjct: 1   MQLNSNEISELIRERIANFDMASEARNEGTIISVSDGIITIHGLAD-AMQGEMIELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRFALALNLERHSVGAVVMGPYADLCEGMKVRGTGRILEVPVGPALLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K +    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEV-KAERFDPVEVIAPGVIDRKSVDEPIQTGYKAVDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K I   +G++   +   +           +++VVA++ ES  L+
Sbjct: 176 TAMAIDAIINQRDTGVKCIYVAIGQKASTIANVVRKLEEHGALANTIIVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEGYVERFTNGEVKGRTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDEATRKQLDHGEKVTELMKQKQ 435


>gi|294155620|ref|YP_003560004.1| ATP synthase F1, alpha subunit [Mycoplasma crocodyli MP145]
 gi|291599905|gb|ADE19401.1| ATP synthase F1, alpha subunit [Mycoplasma crocodyli MP145]
          Length = 527

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 113/438 (25%), Positives = 193/438 (44%), Gaps = 19/438 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M   L+ ++ +  D  KN        + G + SI      V  L + V   + V+    N
Sbjct: 1   MPSRLQDISAIIRDKIKNFDSKIDYAEIGRVISIGDGIALVNGL-ENVMNSEIVIF---N 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G  + +  ++V +   G    IS GD+V   G+   ++      GRVI++LG PID
Sbjct: 57  DSTYGLALNLEEEVVGVTIFGDITSISEGDIVKRTGKVISVAVGDKLLGRVIDSLGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K + + EI       M+R+ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KSNKTREIFRVASGVMSRKEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     +   +G++   V + ++        + + +VV+ + E    +
Sbjct: 176 TAIAIDTIINQKDKNVNCVYVAIGQKNSTVAQIVKKLADTGALEYTTIVVSGASELAPQQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTIAE +  KG +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYTGVTIAEEWMEKGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPS--EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER      E   G+ITA+  +     + +  I  +V SI DG I    +L   G+ P
Sbjct: 296 QLLERAARVTQENGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+V SL   + ++ E   +     +   +D      ++ 
Sbjct: 356 AVDVGFSVSRVGSAAQIKAMKKVVGSLKLELAQYNE---MSAFAQFGSDLDESTKTILNH 412

Query: 410 VPIIYDFLKQSPSDLSSE 427
              +Y+ LKQ      S+
Sbjct: 413 GGKVYELLKQEQYQPISQ 430


>gi|20146588|gb|AAM12448.1| ATP synthase alpha subunit [Madhuca microphylla]
          Length = 399

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLPRPPGREAFPGDVFYLHSRLLERAVKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++    VSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLCVSRVGSAAHLKT 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +     +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNKGARLTE 399


>gi|193216470|ref|YP_001999712.1| F0F1 ATP synthase subunit alpha [Mycoplasma arthritidis 158L3-1]
 gi|226739913|sp|B3PLV6|ATPA_MYCA5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|193001793|gb|ACF07008.1| ATP synthase alpha subunit [Mycoplasma arthritidis 158L3-1]
          Length = 527

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 119/439 (27%), Positives = 198/439 (45%), Gaps = 20/439 (4%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    +D+++N+   + G + ++      V+ L+  V  G+ V  +   S  LG  + 
Sbjct: 10  AIIKAQIKDFNQNVTFDEVGRVITVGDGIALVSGLN-NVEYGELVQFE---SGVLGMTMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D+V I  +G    I  G+LV    +           GRV+NAL KPIDG   +    
Sbjct: 66  LEEDLVGIVVMGDDRSIVEGNLVKRMRQVISTPVGDELLGRVVNALAKPIDGKGKINTS- 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  M RQ V +  +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 125 YHAPIFKVAPGVMARQEVNEPLETGILAIDAMIPIGKGQRELIIGDRQTGKTAIAIDTIL 184

Query: 184 SDCFDKV--IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +     V  I   +G++   + + ++     D LK + ++ A++ ES  L+ +AP T VT
Sbjct: 185 NQKGKHVYCIYIAIGQKNSTISQIVDILNKHDALKYTTIISASAAESAPLQYIAPYTGVT 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE + +KG +VL+I D +++ A + R ++      P    YP  VF    +LLER    
Sbjct: 245 IAEEWMAKGKDVLVIYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHSQLLERAARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G+ITA+  +    ++ +  I  +V SI DG I    SL   G+ P +D   SVS
Sbjct: 305 NKENGGGSITALPIIETQAEDISAYIPTNVISITDGQIFTKESLFNSGQRPAIDIGYSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+VSSL   + ++ E   +     +   +D      +     +Y+ LK
Sbjct: 365 RVGSAAQTKLMKKVVSSLKLELAQYNE---MLAFAQFGSDLDQNTRNILEHGAKVYELLK 421

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q          +++I + L
Sbjct: 422 QPQ-----YSPYEQIKQIL 435


>gi|254447385|ref|ZP_05060851.1| ATP synthase F1, alpha subunit [gamma proteobacterium HTCC5015]
 gi|198262728|gb|EDY87007.1| ATP synthase F1, alpha subunit [gamma proteobacterium HTCC5015]
          Length = 513

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 96/441 (21%), Positives = 182/441 (41%), Gaps = 30/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +N          G + S+      +  L+     G+ +   G  
Sbjct: 1   MQLNPSEISDLIKQRIENFEADNQARSEGTVVSLNDGIIRIHGLAD-AMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D     + +  D V    +G  + ++ GD     GR   +       GRV+NALG+PID
Sbjct: 58  -DTFALALNLEQDSVGAVVLGKADHLAEGDTARCTGRILEVPVGEELLGRVVNALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  I    P  + RQ V++  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGPINTTTQS-PIEKVAPGVIERQGVDQPVQTGIKSIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + D   K I   +G++   +   +           ++VV A + ++ +++
Sbjct: 176 TAVAIDAIINQKDTGVKCIYVAIGQKQSSIANVVRKLEEHGAMDHTIVVAAGAADAAVMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  T   + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 FISAYTGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYIHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARINAEEVKRLTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAINAGLSVSRVGGSAQTKIIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
           +D      + +   + + +KQ
Sbjct: 413 LDEATRAQLERGQRVTELMKQ 433


>gi|170734419|ref|YP_001766366.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           MC0-3]
 gi|169817661|gb|ACA92244.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia
           MC0-3]
          Length = 514

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 152/441 (34%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A  +    +   G ++    +      L   + +G     +      L     +V+    
Sbjct: 71  ARSHRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFAG 128

Query: 68  DIVYICPVGIGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDD 117
           D +++ P      +  G  V+            G  R+       GRV++A G+P+DG  
Sbjct: 129 DRLFLMPTTDVAGVLPGARVWPRESAPVTDPLAGAKRLPVGWEMLGRVVDASGRPLDGLG 188

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 189 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 247

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 248 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 307

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 308 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 367

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 368 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 427

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 428 ISRAMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 487

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 488 LQQGFRECA---PFASSLTAL 505


>gi|254246922|ref|ZP_04940243.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184]
 gi|124871698|gb|EAY63414.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184]
          Length = 514

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 152/441 (34%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A  +    +   G ++    +      L   + +G     +      L     +V+    
Sbjct: 71  ARSHRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFAG 128

Query: 68  DIVYICPVGIGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDD 117
           D +++ P      +  G  V+            G  R+       GRV++A G+P+DG  
Sbjct: 129 DRLFLMPTTDVAGVLPGARVWPRESAPVTDPLAGAKRLPVGWEMLGRVVDASGRPLDGLG 188

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 189 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 247

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 248 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 307

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 308 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 367

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 368 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 427

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 428 ISRAMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 487

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 488 LQQGFRECA---PFASSLTAL 505


>gi|126701091|ref|YP_001089988.1| F0F1 ATP synthase subunit beta [Clostridium difficile 630]
 gi|254977092|ref|ZP_05273564.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-66c26]
 gi|255094420|ref|ZP_05323898.1| F0F1 ATP synthase subunit beta [Clostridium difficile CIP 107932]
 gi|255102677|ref|ZP_05331654.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-63q42]
 gi|255308498|ref|ZP_05352669.1| F0F1 ATP synthase subunit beta [Clostridium difficile ATCC 43255]
 gi|255316172|ref|ZP_05357755.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-76w55]
 gi|255518833|ref|ZP_05386509.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-97b34]
 gi|255652012|ref|ZP_05398914.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-37x79]
 gi|260684987|ref|YP_003216272.1| F0F1 ATP synthase subunit beta [Clostridium difficile CD196]
 gi|260688645|ref|YP_003219779.1| F0F1 ATP synthase subunit beta [Clostridium difficile R20291]
 gi|306521754|ref|ZP_07408101.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-32g58]
 gi|123066472|sp|Q180W5|ATPB_CLOD6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115252528|emb|CAJ70371.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta ) [Clostridium difficile]
 gi|260211150|emb|CBA66591.1| ATP synthase beta chain [Clostridium difficile CD196]
 gi|260214662|emb|CBE07286.1| ATP synthase beta chain [Clostridium difficile R20291]
          Length = 464

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/410 (28%), Positives = 189/410 (46%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
              G +  I      V   S+     L + +V +  + + + +V   I  D V    +  
Sbjct: 2   ANVGKVVQIVGAVLDVKFDSEQSLPNLLNALVIKLGDKEIVAEVAQHIGDDTVRCIAMSA 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LGKP+DG  +  K    + I    P   
Sbjct: 62  TDGLVRGMEVVDTGGPISVPVGDETLGRIFNVLGKPVDGKPA-PKSAPKLPIHRPAPAYD 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
             +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + S
Sbjct: 121 ELETTAEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFS 180

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AE+F  +   +
Sbjct: 181 GVGERTREGNDLYGEMSESGVINKTALVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V 
Sbjct: 241 VLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  S LD   VL+R ++  G YP VDPL S SR+ D      +  
Sbjct: 299 AVYVPADDLTDPAPATTFSHLDAKTVLSRQISSLGIYPAVDPLESTSRILDPSIVGKEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ R++E +DI  I G     D      V +   I  FL QS
Sbjct: 359 EVARGVQSILQRYKELQDIIAILGMDELSDED-KLIVARARKIQRFLSQS 407


>gi|58584572|ref|YP_198145.1| F0F1 ATP synthase subunit alpha [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|75497937|sp|Q5GSX1|ATPA_WOLTR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|58418888|gb|AAW70903.1| F0F1-type ATP synthase, alpha subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 513

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/430 (23%), Positives = 189/430 (43%), Gaps = 23/430 (5%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + +  E +   +  +  G + S+T     V  L +    G+ V      S   G V+ ++
Sbjct: 14  IREKVEAFDNPIKKENIGEVISVTDGIALVYGLEK-AKFGEKVFF---TSGVEGIVLDLD 69

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D   I  +G   ++  GD V   G   ++       GRV+NALG  ID    + +    
Sbjct: 70  HDTAGIVVLGNDRDVKEGDTVKCSGDVMQVPVGHELLGRVVNALGHSIDNSGEI-RSKNR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS- 184
           M++ SK P  ++R+ V +  +TGI++ID+  P+  GQR  V     IGK+T+      + 
Sbjct: 129 MDMESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELVIGDRQIGKTTIALDTIVNQ 188

Query: 185 ---------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                    +     +   +G++   V + +         + + VVVA++ +   ++ +A
Sbjct: 189 KKINDEVDENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDCAPMQFLA 248

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    TI E+F   G + L++ D +++ A + R+++      P    YP  +F    RLL
Sbjct: 249 PYAGCTIGEFFRDNGMHCLVVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIFYVHSRLL 308

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      E  +G++TA+  +     + +  +  +V SI DG I L   L  +G  P V+
Sbjct: 309 ERAAKMSDEKGRGSLTALPIIETQAGDVSAYVPTNVISITDGQIFLESELFHKGFRPAVN 368

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  S+   + ++ E  D      +   +D  +  ++++   
Sbjct: 369 IGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYRELEDFA---KFGSDLDASVQLSLNKGKY 425

Query: 413 IYDFLKQSPS 422
           + + LKQ   
Sbjct: 426 LVELLKQKQH 435


>gi|86151231|ref|ZP_01069446.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|121613240|ref|YP_999914.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|157414504|ref|YP_001481760.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|167004874|ref|ZP_02270632.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315123794|ref|YP_004065798.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841578|gb|EAQ58825.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|87250392|gb|EAQ73350.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|157385468|gb|ABV51783.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747146|gb|ADN90416.1| Flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315017516|gb|ADT65609.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 461

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 163/436 (37%), Positives = 239/436 (54%), Gaps = 6/436 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV 62
           NLE L        +NL    G I+ I++    +  L   V  +   V ++ +N + L  V
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++ +
Sbjct: 60  VEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI-E 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 VSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+++
Sbjct: 179 VKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSV 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E
Sbjct: 239 AEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEE 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 299 G-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P
Sbjct: 358 SDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+  ++
Sbjct: 418 EESFEFNQTLELLSQI 433


>gi|296268883|ref|YP_003651515.1| ATP synthase F1 subunit alpha [Thermobispora bispora DSM 43833]
 gi|296091670|gb|ADG87622.1| ATP synthase F1, alpha subunit [Thermobispora bispora DSM 43833]
          Length = 549

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/442 (20%), Positives = 176/442 (39%), Gaps = 28/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG------GYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           +    + +    E + +    +G      G +         V+ L       + +  +  
Sbjct: 4   LTIRPDEIRDALERFVQAYEPEGAAREEIGTVVDAADGIAHVSGL-PSTMANELLEFEDG 62

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
                G  + +++  + +  +G   +I  G  V   G    +     + GRV++ LG P+
Sbjct: 63  ---TRGIALNLDVREIGVVILGDFSKIEEGQRVRRTGEVLSVPVGEGYLGRVVDPLGNPL 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + + +    +  + P  + RQ V++  +TGI+ ID  TP+  GQR  +    G G
Sbjct: 120 DGKGPI-ETEGRRALELQAPSVIQRQPVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRGTG 178

Query: 174 K-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVA 222
           K      T+L+        D     + I   VG++G  + +             + +V A
Sbjct: 179 KTAIAIDTILNQKENWLSGDPKKQVRCIYVAVGQKGSTIAQVKARLEEMGAMEYTTIVAA 238

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + +    + +AP T   I +++  +G +VL+I D +++ A + R ++      P    +
Sbjct: 239 PASDPAGFKYIAPYTGSAIGQHWMYQGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAF 298

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E   G++T +  +   G++ +  I  +V SI DG   L  
Sbjct: 299 PGDVFYLHSRLLERCAKLSDEMGGGSLTGLPIIETKGNDVSAFIPTNVISITDGQCFLET 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     KK+  +L   + ++ E         +   +D
Sbjct: 359 DLFNAGVRPAINVGISVSRVGGSAQIKAMKKVAGTLRLALSQYRELE---AFAAFASDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
                 + +   + + LKQ   
Sbjct: 416 AASRAQLERGARLVELLKQPQF 437


>gi|238028890|ref|YP_002913121.1| flagellum-specific ATP synthase FliI [Burkholderia glumae BGR1]
 gi|237878084|gb|ACR30417.1| Flagellum-specific ATP synthase FliI [Burkholderia glumae BGR1]
          Length = 480

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 223/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +    T L   + +G   + +      L     +V+    D +++ P  
Sbjct: 46  RPCGRLTRAAGLVLEATGL--RLAVGSECIIELPPGSTLPVAEAEVVGFAGDRLFLMPTT 103

Query: 77  IGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    LG  +L  
Sbjct: 104 EVAGVLPGARVWPLERAPVADPMTGAKRLPVGWQMLGRVVDASGRPLDRLGPLG-SELDA 162

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     + R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 163 PLSAPTINPLEREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 222

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A ++AEYF
Sbjct: 223 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYF 282

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 283 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 342

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D   S+SR      
Sbjct: 343 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAEAGHYPAIDIEQSISRAMTALI 402

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y  G D  LD+A+   P I  FL+Q   + +
Sbjct: 403 DDRHLDRVRRFKQMLSRYQRNRDLIAVGAYAAGRDAQLDRAIALYPRIEAFLQQGFRECA 462

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 463 PFASCMAALDAL 474


>gi|153840147|ref|ZP_01992814.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus AQ3810]
 gi|260361989|ref|ZP_05774994.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus K5030]
 gi|260876524|ref|ZP_05888879.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus AN-5034]
 gi|260897419|ref|ZP_05905915.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus Peru-466]
 gi|260901304|ref|ZP_05909699.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus AQ4037]
 gi|149746214|gb|EDM57318.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus AQ3810]
 gi|308087923|gb|EFO37618.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus Peru-466]
 gi|308090405|gb|EFO40100.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus AN-5034]
 gi|308109899|gb|EFO47439.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus AQ4037]
 gi|308114115|gb|EFO51655.1| ATP synthase F1, alpha subunit [Vibrio parahaemolyticus K5030]
 gi|328471196|gb|EGF42098.1| F0F1 ATP synthase subunit alpha [Vibrio parahaemolyticus 10329]
          Length = 513

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/456 (22%), Positives = 189/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|237731989|ref|ZP_04562470.1| flagellum-specific ATP synthase [Citrobacter sp. 30_2]
 gi|226907528|gb|EEH93446.1| flagellum-specific ATP synthase [Citrobacter sp. 30_2]
          Length = 456

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 159/429 (37%), Positives = 238/429 (55%), Gaps = 19/429 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD----NLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   V + ++ +       +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCVIERQDGNETQEVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              E +  G  V+           G+ ++       GRV++  GKP+DG  +    + + 
Sbjct: 83  EEVEGVLPGARVYAKNIAGEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPAPDTTE-TG 140

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR   
Sbjct: 141 ALITPPFNPLQRTAIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQ 200

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F
Sbjct: 201 ADVIVVGLIGERGREVKDFIENILGADGRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 260

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 261 RDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGG 320

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      
Sbjct: 321 SVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRHLAEAGHYPAIDIEASISRAMTALI 380

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + +
Sbjct: 381 SEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEAFLQQGIFERA 440

Query: 426 S-EDVFQEI 433
             ED  Q +
Sbjct: 441 DWEDSLQAL 449


>gi|164685630|gb|ABY66761.1| atp1 [Aralia spinosa]
          Length = 413

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|77457766|ref|YP_347271.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf0-1]
 gi|77381769|gb|ABA73282.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf0-1]
          Length = 452

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 157/432 (36%), Positives = 236/432 (54%), Gaps = 15/432 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN----SDN 58
           K L T A+  E     ++   G +  +  +      L     +G   +    +    S  
Sbjct: 10  KRLSTYAEATEIAGAPIL--EGRLLRMVGLTLEAEGL--RAAMGTRCMVINDDTYHPSQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   V++ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 66  EAEVMGFSGSKVFLMPVGSVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRALDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +       +NR  +      GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 KGGM-KAEDWVPMDGPTINPLNRDPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +EK  G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  
Sbjct: 303 ERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+     + +  +       L  R++++RD+  +G Y  G D   D A++  P + 
Sbjct: 363 ASISRVMPAVVAPEHMQRAQYFKQLWSRYQQSRDLISVGAYVAGGDRETDLAINLQPQLV 422

Query: 415 DFLKQSPSDLSS 426
            +L+Q  +D  S
Sbjct: 423 RYLRQGLNDKIS 434


>gi|269216177|ref|ZP_06160031.1| ATP synthase F1, alpha subunit [Slackia exigua ATCC 700122]
 gi|269130436|gb|EEZ61514.1| ATP synthase F1, alpha subunit [Slackia exigua ATCC 700122]
          Length = 522

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 99/435 (22%), Positives = 176/435 (40%), Gaps = 25/435 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVI 63
           E L +  ED   ++   + G +  +      +  L +    G+ +   G       G   
Sbjct: 13  EALRKQLEDLETSVDAREVGTVVQVGDGIARIDGL-KGAMAGELLEFIGADGRTVYGLAQ 71

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            +  + V    +G    I   D V   GR    PS     GRV+N LG PIDG   + K 
Sbjct: 72  NLEEEEVGAVLMGDVTAIRENDQVRTTGRIMEVPSGKSLLGRVVNPLGMPIDGKGPI-KA 130

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  K P  ++R+ V +  +TGI  +D   P+  GQR  +      GK+ +     
Sbjct: 131 EGMRPVEFKAPGVIHRKPVHEPMQTGIVAVDTMIPIGRGQRELIIGDRQTGKTAIAIDAI 190

Query: 183 RSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   VG++   V   +E          +++V AT+ +S  L+ +AP+   
Sbjct: 191 INQKGKDMICIYVAVGQKASTVANVMETLEKHGAMEYTIIVSATASDSAPLQYIAPMAGA 250

Query: 240 TIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + E+F   G+            +VL+I D +++ A + R+++      P    YP  +F
Sbjct: 251 AMGEHFVYTGEDGKPAGPENLGRHVLIIYDDLSKQAVAYRQMSLTLHRPPGREAYPGDIF 310

Query: 288 SELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER     +  G   +TA+  +     + +  I  +V SI DG I L+  L  +
Sbjct: 311 YLHSRLLERAVKMNEANGCGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSTDLFFQ 370

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G+ P ++   SVSR+   A +   K    +L   +  + E +       +   +D     
Sbjct: 371 GQRPAINVGISVSRVGGSAQTKAVKSQSGTLRLDLASYRELQ---AFTQFGSDLDKSTQD 427

Query: 406 AVHQVPIIYDFLKQS 420
            +++   + + LKQ 
Sbjct: 428 QLNRGARMTELLKQG 442


>gi|262402100|ref|ZP_06078664.1| ATP synthase alpha chain [Vibrio sp. RC586]
 gi|262351746|gb|EEZ00878.1| ATP synthase alpha chain [Vibrio sp. RC586]
          Length = 513

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  +  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-IMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G   L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPIG-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|164685578|gb|ABY66735.1| atp1 [Bursera simaruba]
          Length = 413

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|27461583|gb|AAM95208.1| ATPase F1 alpha subunit [Tonina fluviatilis]
          Length = 416

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/408 (21%), Positives = 161/408 (39%), Gaps = 22/408 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G    +  + V +   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGLVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +      +                +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKGTESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++          S++V AT+ +   L+ +AP +   + E F     + L+I
Sbjct: 176 QKRSTVAQLVQILEEAMAMEYSILVAATASDPAPLQFLAPYSGCAMGEDFRDNRMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 400


>gi|329849943|ref|ZP_08264789.1| flagellar protein export ATPase FliI [Asticcacaulis biprosthecum
           C19]
 gi|328841854|gb|EGF91424.1| flagellar protein export ATPase FliI [Asticcacaulis biprosthecum
           C19]
          Length = 443

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 165/440 (37%), Positives = 254/440 (57%), Gaps = 13/440 (2%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRIN 66
           L Q+A+      +   G ++ +  +         Y+ +G       +N + L  +V+   
Sbjct: 4   LVQIAKTVEP--MRVYGRVAVVNGLLIEAKGGLSYMQVGARCEILRRNEEPLPVEVVGFR 61

Query: 67  LDIVYICPVGIGEEISLGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
            D   + P G  E ++ G  +     G  ++ P+  W GR++++ G  ID    L +G  
Sbjct: 62  EDRALMMPFGPVEGVTPGAEIRISAEGS-KVFPTTAWLGRIVDSFGNAIDSHGPLPQGPE 120

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              + +  P A  R RV +    G+R +D+FT  C GQR+GVFAGSG+GKS LLSM AR 
Sbjct: 121 GYLLKAAPPAAHTRARVGERLNLGVRAMDVFTTCCRGQRLGVFAGSGVGKSVLLSMLARE 180

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D V++ L+GERGREVREFIE+ LG + LK+++VVVATSDE  + R+ A    + +AE
Sbjct: 181 ATCDAVVVGLIGERGREVREFIEETLGPEGLKRAIVVVATSDEPALKRRQAAYMTLALAE 240

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-- 301
           +   +G  VL ++DS+TRFA + REI   +GE P  +GY  + F+ELP+LLER GP    
Sbjct: 241 FLRDQGLEVLCLMDSVTRFAMAQREIGLATGEPPTTKGYTPTCFAELPKLLERAGPGPVL 300

Query: 302 ---KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               + G ITA+ +VLVDGD+HN+PIAD+VR ILDGHIV++R++AE GR+P +D L S+S
Sbjct: 301 ADGTQAGPITALFTVLVDGDDHNEPIADAVRGILDGHIVMSRNIAERGRFPAIDVLKSIS 360

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R   +  +  E+++V     ++  +    ++  IG YR G D  +D+A+   P + +FL+
Sbjct: 361 RTMPECQTIPEREVVRQARKVLSAYSNMEELIRIGAYRTGADPDVDRAIQLNPAVEEFLR 420

Query: 419 QSPSDLSSED-VFQEITKKL 437
           Q   + +  D  F  + + L
Sbjct: 421 QGKDEYTPLDESFTLLAEIL 440


>gi|15608448|ref|NP_215824.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis H37Rv]
 gi|15840759|ref|NP_335796.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           CDC1551]
 gi|31792501|ref|NP_854994.1| F0F1 ATP synthase subunit alpha [Mycobacterium bovis AF2122/97]
 gi|121637237|ref|YP_977460.1| F0F1 ATP synthase subunit alpha [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148661096|ref|YP_001282619.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis H37Ra]
 gi|148822526|ref|YP_001287280.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis F11]
 gi|167969636|ref|ZP_02551913.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis H37Ra]
 gi|215403150|ref|ZP_03415331.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           02_1987]
 gi|215410947|ref|ZP_03419755.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426635|ref|ZP_03424554.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis T92]
 gi|215445486|ref|ZP_03432238.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis T85]
 gi|218753016|ref|ZP_03531812.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis GM
           1503]
 gi|219557209|ref|ZP_03536285.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis T17]
 gi|224989712|ref|YP_002644399.1| FOF1 ATP synthase subunit alpha [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799646|ref|YP_003032647.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           1435]
 gi|254231566|ref|ZP_04924893.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis C]
 gi|254364205|ref|ZP_04980251.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254550316|ref|ZP_05140763.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260186247|ref|ZP_05763721.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis CPHL_A]
 gi|260200361|ref|ZP_05767852.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis T46]
 gi|260204566|ref|ZP_05772057.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis K85]
 gi|289442747|ref|ZP_06432491.1| ATP synthase F1, alpha subunit [Mycobacterium tuberculosis T46]
 gi|289446903|ref|ZP_06436647.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis CPHL_A]
 gi|289554902|ref|ZP_06444112.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           605]
 gi|289569320|ref|ZP_06449547.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T17]
 gi|289573971|ref|ZP_06454198.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis K85]
 gi|289745054|ref|ZP_06504432.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           02_1987]
 gi|289749865|ref|ZP_06509243.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T92]
 gi|289757408|ref|ZP_06516786.1| ATP synthase F1 sector subunit alpha [Mycobacterium tuberculosis
           T85]
 gi|289761463|ref|ZP_06520841.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis GM 1503]
 gi|294994864|ref|ZP_06800555.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis 210]
 gi|297633860|ref|ZP_06951640.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis KZN
           4207]
 gi|297730847|ref|ZP_06959965.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis KZN
           R506]
 gi|298524812|ref|ZP_07012221.1| ATP synthase alpha subunit atpA [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775480|ref|ZP_07413817.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu001]
 gi|306781609|ref|ZP_07419946.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu002]
 gi|306784033|ref|ZP_07422355.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu003]
 gi|306792723|ref|ZP_07431025.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu005]
 gi|306797128|ref|ZP_07435430.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu006]
 gi|306803008|ref|ZP_07439676.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu008]
 gi|306807198|ref|ZP_07443866.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu007]
 gi|306971589|ref|ZP_07484250.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu010]
 gi|307079304|ref|ZP_07488474.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu011]
 gi|307083872|ref|ZP_07492985.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu012]
 gi|313658180|ref|ZP_07815060.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis KZN
           V2475]
 gi|54036782|sp|P63674|ATPA_MYCBO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|54040852|sp|P63673|ATPA_MYCTU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158512946|sp|A1KI96|ATPA_MYCBP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158513365|sp|A5U207|ATPA_MYCTA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254808107|sp|C1AMV2|ATPA_MYCBT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|1322432|emb|CAA97741.1| PROBABLE ATP SYNTHASE ALPHA CHAIN ATPA [Mycobacterium tuberculosis
           H37Rv]
 gi|13880951|gb|AAK45610.1| ATP synthase F1, alpha subunit [Mycobacterium tuberculosis CDC1551]
 gi|31618090|emb|CAD94201.1| PROBABLE ATP SYNTHASE ALPHA CHAIN ATPA [Mycobacterium bovis
           AF2122/97]
 gi|121492884|emb|CAL71355.1| Probable ATP synthase alpha chain atpA [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600625|gb|EAY59635.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis C]
 gi|134149719|gb|EBA41764.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148505248|gb|ABQ73057.1| ATP synthase alpha chain AtpA [Mycobacterium tuberculosis H37Ra]
 gi|148721053|gb|ABR05678.1| ATP synthase alpha subunit atpA [Mycobacterium tuberculosis F11]
 gi|224772825|dbj|BAH25631.1| FOF1 ATP synthase subunit alpha [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321149|gb|ACT25752.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           1435]
 gi|289415666|gb|EFD12906.1| ATP synthase F1, alpha subunit [Mycobacterium tuberculosis T46]
 gi|289419861|gb|EFD17062.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis CPHL_A]
 gi|289439534|gb|EFD22027.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           605]
 gi|289538402|gb|EFD42980.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis K85]
 gi|289543074|gb|EFD46722.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T17]
 gi|289685582|gb|EFD53070.1| F0F1 ATP synthase subunit alpha [Mycobacterium tuberculosis
           02_1987]
 gi|289690452|gb|EFD57881.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis T92]
 gi|289708969|gb|EFD72985.1| ATP synthase alpha chain atpA [Mycobacterium tuberculosis GM 1503]
 gi|289712972|gb|EFD76984.1| ATP synthase F1 sector subunit alpha [Mycobacterium tuberculosis
           T85]
 gi|298494606|gb|EFI29900.1| ATP synthase alpha subunit atpA [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216027|gb|EFO75426.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu001]
 gi|308325571|gb|EFP14422.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu002]
 gi|308331265|gb|EFP20116.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu003]
 gi|308338889|gb|EFP27740.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu005]
 gi|308342503|gb|EFP31354.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu006]
 gi|308346437|gb|EFP35288.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu007]
 gi|308350308|gb|EFP39159.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu008]
 gi|308358957|gb|EFP47808.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu010]
 gi|308362838|gb|EFP51689.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu011]
 gi|308366505|gb|EFP55356.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           SUMu012]
 gi|323720265|gb|EGB29364.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902930|gb|EGE49863.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis W-148]
 gi|328459392|gb|AEB04815.1| ATP synthase subunit alpha atpA [Mycobacterium tuberculosis KZN
           4207]
          Length = 549

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/438 (23%), Positives = 177/438 (40%), Gaps = 27/438 (6%)

Query: 6   ETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E+Y  +        + G +         V  L   V   + +   G     LG
Sbjct: 9   DDIQSAIEEYVSSFTADTSREEVGTVVDAGDGIAHVEGL-PSVMTQELLEFPGG---ILG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   V    +G  E I  G  V   G    +     + GRV+N LG+PIDG   +
Sbjct: 65  VALNLDEHSVGAVILGDFENIEEGQQVKRTGEVLSVPVGDGFLGRVVNPLGQPIDGRGDV 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              D    +  + P  ++RQ V++  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 D-SDTRRALELQAPSVVHRQGVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
            T+L+     +  D     + +   +G++G  +               + +V A + ES 
Sbjct: 184 DTILNQRQNWESGDPKKQVRCVYVAIGQKGTTIAAVRRTLEEGGAMDYTTIVAAAASESA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   IA+++  +G +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIAQHWMYEGKHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++T +  +    ++ +  I  +V SI DG   L   L  +G
Sbjct: 304 LHSRLLERCAKLSDDLGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLETDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E         +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELE---AFAAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDL 424
           + +   + + LKQ  S  
Sbjct: 421 LERGARLVELLKQPQSQP 438


>gi|251771546|gb|EES52123.1| ATP synthase F1, alpha subunit [Leptospirillum ferrodiazotrophum]
          Length = 500

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 95/402 (23%), Positives = 171/402 (42%), Gaps = 14/402 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S       ++ L + +  G+ +      +     V+ +  + +    +  GE   +
Sbjct: 27  GTILSSGDGILRISGLEKAMS-GEMLELIKGGT---ALVLNLEENEIGAVILEGGENAVV 82

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   G+   +       GRV+N +G+P+DG   + K +L   I    P    R+ V 
Sbjct: 83  GDEVRTTGKIMEVPVGPGLVGRVVNPMGEPLDGKGPI-KAELHSPIEKIAPGVSTRKSVS 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--IISLVGERGR 200
              +TG++ ID   P+  GQR  +      GK+T+      +   + V  I   +G++  
Sbjct: 142 VPLQTGVKAIDAMIPIGRGQRELIIGDRQTGKTTIALDTIINQKGNNVVCIYVAIGQKAS 201

Query: 201 EVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V   I           ++VV A++ ES  L+ +AP     + EYF  +G + L++ D +
Sbjct: 202 SVVNVIRTLEKHGAMDYTIVVSASAAESAALQYIAPYAGCAMGEYFRDRGMDALIVYDDL 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           T+ A + R+++      P    YP  VF    RLLER     ++   G++TA+  +    
Sbjct: 262 TKHAWAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAARLNEKSGGGSLTALPIIETQA 321

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  +  +V SI DG I L   L   G  P ++P  SVSR+   A     K++   + 
Sbjct: 322 GDVSAFVPTNVISITDGQIYLETDLFYSGIRPAINPGISVSRVGGAAQIKAMKQVAGKMR 381

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             + +F E   +     +   +D      + +   + + LKQ
Sbjct: 382 LEMAQFRE---LAAFAQFASDLDKTTRDQIERGLRLTEILKQ 420


>gi|92115401|ref|YP_575329.1| ATP synthase F1, alpha subunit [Chromohalobacter salexigens DSM
           3043]
 gi|119367951|sp|Q1QSC8|ATPA_CHRSD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|91798491|gb|ABE60630.1| ATP synthase F1, alpha subunit [Chromohalobacter salexigens DSM
           3043]
          Length = 514

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 96/447 (21%), Positives = 182/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ + +   + L         G + S++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISDIIKQRIEKLDVASEARNEGTVVSVSDGIVKIHGLAD-AMFGEMIEFPGS-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G V+ +  D V    +G   ++  G      GR   +       GRV++ LG PIDG
Sbjct: 60  -IFGMVLNLERDSVGAVVLGDYLQLEEGMTAQCTGRILEVPVGPELIGRVVDPLGVPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L    L+  +    P  + RQ V++  +TG++ ID   P+  GQR  +     IGKS
Sbjct: 119 KGELD-TKLTDAVEKVAPGVITRQSVDEPIQTGLKSIDAMVPIGRGQRELIIGDRQIGKS 177

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +      +        +   +G++   +   +         + ++VV A + +   ++ 
Sbjct: 178 AIAIDTIINQKGKGVTCVYVAIGQKQSTIANVVRKLEEHGAMEHTIVVAAGAADPAPMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +A  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF    R
Sbjct: 238 LAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADHVEKLTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A +   KKL  S+   + ++ E   +     +   +
Sbjct: 358 TNLFNSGVRPAINAGLSVSRVGGSAQTKIIKKLGGSVRLALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ+     S
Sbjct: 415 DEATRKQLEHGQRVTELMKQNQYSPLS 441


>gi|300933622|ref|ZP_07148878.1| F0F1 ATP synthase subunit alpha [Corynebacterium resistens DSM
           45100]
          Length = 546

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/438 (23%), Positives = 187/438 (42%), Gaps = 23/438 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +A     YS     +  G +++       VT +   V   + +   G     +G    
Sbjct: 13  SAIANYTSSYSPEASREEVGVVTTAADGIAQVTGM-PSVMANELLEFPGG---VIGVAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+ IDG  ++ + D
Sbjct: 69  LDTDSVGVVVLGNYESLKEGDEVKRTGEVLSIPVGEKFLGRVINPLGQAIDGLGNI-EAD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 128 EERVLELQAPSVLMRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTSVCIDTIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +        D     + I   +G++G  +    +    +   + + +V A + +S   + 
Sbjct: 188 NQRENWASGDPKKQVRCIYVAIGQKGSTIASIRKTLEDNGALEYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPFAGAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G  P 
Sbjct: 308 LLERAAKLHDDLGGGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      + + 
Sbjct: 368 INVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFAAFASDLDPASKAQLERG 424

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ+ +   S +
Sbjct: 425 KRLVELLKQTETKPQSVE 442


>gi|171920573|ref|ZP_02931837.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185178864|ref|ZP_02964638.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024257|ref|ZP_02996953.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518549|ref|ZP_03004010.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524099|ref|ZP_03004179.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867747|ref|ZP_03079748.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273545|ref|ZP_03206081.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209554117|ref|YP_002284554.1| F0F1 ATP synthase subunit alpha [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225550353|ref|ZP_03771302.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225551515|ref|ZP_03772461.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903277|gb|EDT49566.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209500|gb|EDU06543.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018920|gb|EDU56960.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188997893|gb|EDU66990.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195659968|gb|EDX53348.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660602|gb|EDX53858.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198250065|gb|EDY74845.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|209541618|gb|ACI59847.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|225379330|gb|EEH01695.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|225379507|gb|EEH01869.1| ATP synthase F1, alpha subunit [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 797

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/420 (25%), Positives = 180/420 (42%), Gaps = 14/420 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +Q+ +   K L ++ G + S+      V  L   V L + V  +       G  + +  D
Sbjct: 15  SQIKKFSEKALTLEVGNVISLGDGIVLVDGL-DNVMLNEIVRFENG---VEGMALNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    I  GD V+   +   +       GRV++ALGK +D   ++     S+ 
Sbjct: 71  AVGVVLLGDYSNIKEGDRVYRTKKIVEVPVGDIMLGRVVDALGKAVDNKGNIVANKFSV- 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  M+R+ V +  +TGI  ID   P+  GQR  +      GK+T+      +   
Sbjct: 130 IEKIAPGVMDRKSVHQPLETGILSIDAMFPIGKGQRELIIGDRQTGKTTIAIDAIINQKG 189

Query: 188 --DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEY 244
                +   +G++   +   + D         + VV A + E P L+ +AP T VTIAE 
Sbjct: 190 RNVNCVYVAIGQKNSTIANVVRDLEAHGAMEYTTVVTANASELPALQYIAPFTGVTIAEE 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE- 303
           +  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER    + E 
Sbjct: 250 WMHQGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSRLLERACKLKDEL 309

Query: 304 -KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA+  +     + +  I  +V SI DG I +  SL   G+ P +D   SVSR+  
Sbjct: 310 GAGSITALPIIETQAGDISAYIPTNVISITDGQIFMMTSLFNAGQRPAIDAGQSVSRVGS 369

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A     K+  +SL   +  + E         +   +D    + +     +   +KQ P+
Sbjct: 370 AAQIKSVKQTGASLKLELANYRELE---AFSQFGSDLDDETKRILKLGKAVMAVIKQEPN 426


>gi|220913085|ref|YP_002488394.1| F0F1 ATP synthase subunit alpha [Arthrobacter chlorophenolicus A6]
 gi|254807672|sp|B8HAZ1|ATPA_ARTCA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219859963|gb|ACL40305.1| ATP synthase F1, alpha subunit [Arthrobacter chlorophenolicus A6]
          Length = 545

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 95/446 (21%), Positives = 180/446 (40%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G +++ +     V  L   V   + +  +      LG    
Sbjct: 14  ALNEFAASYEPGNAERVEVGRVTTASDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  + +  +G    I  G  V   G+   +     + GRV++ LG PID    + K +
Sbjct: 70  LDVREIGVIILGDFTGIEEGQEVHRTGQVLSVPVGDAFLGRVVDPLGVPIDDLGEI-KAE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 129 TTRALELQAPGVTQRKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKSAIAIDTII 188

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A     D       I   +G++   +    +    +   + + +V + + +    + 
Sbjct: 189 NQKANWASGDVTKQVRCIYVAIGQKASTIAAVRQTLEENGALEYTTIVASPASDPAGFKY 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 249 LAPYAGSAIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 308

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 309 LLERCAKLSDELGAGSMTGLPLIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   RD++    +   +D    + + + 
Sbjct: 369 VDVGVSVSRVGGAAQVKSMKKVSGTLKLELAQY---RDMQAFAMFASDLDAASRQQLTRG 425

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    ED    I  
Sbjct: 426 ARLMELLKQGQYSPFPVEDQVVSIWA 451


>gi|159900583|ref|YP_001546830.1| F0F1 ATP synthase subunit alpha [Herpetosiphon aurantiacus ATCC
           23779]
 gi|226739896|sp|A9AVV2|ATPA_HERA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|159893622|gb|ABX06702.1| ATP synthase F1, alpha subunit [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 517

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 96/423 (22%), Positives = 173/423 (40%), Gaps = 21/423 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPV 75
              V  G ++S+      ++ L + V   + +  +        +G  + +  D V    +
Sbjct: 24  PTAVNVGTVASVGDGVARISGL-RDVMASELLEFKQTKSGETVMGIALNLEKDNVAAVIL 82

Query: 76  GIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G   EI  GDLV   G+   +       GRV++ LG+P+DG   +     + E+    P 
Sbjct: 83  GDYLEIEEGDLVRSTGKIISVPVGQELLGRVVDPLGRPLDGKGPISASK-TREVERIAPG 141

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVII 192
            + R+ V +  +TGI  ID   P+  GQR  +      GK+ +      +        + 
Sbjct: 142 VIERKSVSQPVQTGILAIDALIPIGRGQRELIIGDRQTGKTAIAIDTIINQRGQGMVCVY 201

Query: 193 SLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-- 249
             +G++  +V + I        +  ++VV A++ ES  L+ +AP +   IAE     G  
Sbjct: 202 VAIGQKRSKVAQTITTLEQNGAMDYTIVVNASASESAALQYIAPYSGCAIAEEVMEVGVT 261

Query: 250 ------DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  + L+I D +++ A + R+++      P    YP  VF    RLLER     + 
Sbjct: 262 VDGNLVKDALIIYDDLSKHAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLSEV 321

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+  +    ++ +  I  +V SI DG I L   L   G+ P ++   SVSR+ 
Sbjct: 322 NGGGSITALPIIETQANDVSAYIPTNVISITDGQIFLESDLFYAGQRPALNVGISVSRVG 381

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A +   K +   +   + +F E         +   +D      + +   + + LKQ  
Sbjct: 382 SSAQTKAMKTVAGKMKLELAQFREL---AAFAMFASDLDAGTKAQIERGQRLSELLKQPQ 438

Query: 422 SDL 424
              
Sbjct: 439 YQP 441


>gi|27461575|gb|AAM95204.1| ATPase F1 alpha subunit [Carex interior]
          Length = 389

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/397 (23%), Positives = 168/397 (42%), Gaps = 22/397 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENESVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPTGRAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGE 197
           G++ +D   P+  GQR  +      GK+ +          L+   + +     +   VG+
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNSKGKENEKLYCVYVAVGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + +++V AT+ +   L+ +AP +   + E+F   G + L+I 
Sbjct: 176 KRSTVAQLVKILSEANALEYTILVAATASDPAPLQFLAPYSXCAMGEFFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           SL   + ++ E   +     +   +D      +++  
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGA 389


>gi|182440967|dbj|BAG24092.1| HrcN [Pseudomonas cichorii]
          Length = 424

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 149/420 (35%), Positives = 229/420 (54%), Gaps = 12/420 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ ++ +            +GD   + +   ++ + +++  +     +  +G  + I+
Sbjct: 2   GRIAGVSGILL--HSHMPQARIGDLCEIRRADGTEVMAEIVGFDRKHTLLAALGALDGIA 59

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDS----LGKGDLSMEIMSKVPPAMN 137
           +G  V        +       G V++  G+ + GD      L     +  ++   PPA  
Sbjct: 60  IGAPVRPLFQPHSLVVGEYLLGSVLDGFGRSLSGDGPSAFALSGAAGAQPVIRDAPPATE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R+E    TG+R ID    L  GQR+G+FAG+G GK+TLL+  AR+   + ++  L+GE
Sbjct: 120 RPRIEAPLSTGLRAIDGLLTLGEGQRVGLFAGAGCGKTTLLAEMARNTPCEAIVFGLIGE 179

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGRE+REF+  +   +   ++V+V +TSD S + R  A  TA TIAE F  +G + LLI+
Sbjct: 180 RGRELREFLDHELDEELRSRTVLVCSTSDRSSMERARAAFTATTIAEGFRQQGKSTLLII 239

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI   SGE     G P SV+S LPRL+ER G +    G ITA+ SVL++
Sbjct: 240 DSLTRFARAQREIGLASGEPAGRGGLPPSVYSLLPRLVERAGRTRT--GAITALYSVLIE 297

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
            D+ NDP+AD VRS+LDGHIVL+R LAE G YP VD L S+SR        ++ K  + +
Sbjct: 298 QDSMNDPVADEVRSLLDGHIVLSRRLAERGHYPAVDILTSLSRTMSNVVGTEQVKGATQI 357

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435
             L+  +++   +  +G Y+ G D + D AV     I DFL+QS  D +S ED    + +
Sbjct: 358 RRLLAAYQQVEMLIKLGEYQQGNDPLTDFAVQSRDQIMDFLQQSLRDPVSLEDTLDHLIQ 417


>gi|55976878|gb|AAV68288.1| F1-ATPase alpha subunit [Bdallophytum americanum]
          Length = 396

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 3   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 60  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     +
Sbjct: 119 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVKILSEAH 178

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 179 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 238

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 239 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 298

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 299 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 355

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 356 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 386


>gi|20146622|gb|AAM12465.1| ATP synthase alpha subunit [Vaccinium uliginosum]
          Length = 389

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 94/397 (23%), Positives = 164/397 (41%), Gaps = 23/397 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L+Q +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNQ-IQAGEMVEFA---SGVKGIALNLENENVGIVAFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMNSRGTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L   + ++ E   +     +   +D      +++   
Sbjct: 356 LKLELAQYRE---VAAFAQFGSDLDAATQALLNRGAR 389


>gi|12659349|gb|AAG60209.1| ATPase alpha subunit [Aristolochia elegans]
          Length = 413

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 167/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 402


>gi|168234145|ref|ZP_02659203.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194472268|ref|ZP_03078252.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194458632|gb|EDX47471.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205331873|gb|EDZ18637.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 456

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 235/428 (54%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + ++     +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 83  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLE-TGA 141

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 142 LITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRA 201

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 202 DVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 261

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 262 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      +
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALIT 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 382 EQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERAD 441

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 442 WEDSLQAL 449


>gi|47227593|emb|CAG09590.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 534

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 93/404 (23%), Positives = 172/404 (42%), Gaps = 19/404 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 69  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 124

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  I     LG       +  K P  + R  
Sbjct: 125 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI---GPLG-SKTRRRVGLKAPGIIPRIS 180

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +  +TGI+ +D   P+  GQR      +   ++   +            +  +G++  
Sbjct: 181 VREPMQTGIKAVDSLVPIGRGQREL----THRRQTDRQNRHCHRHNHQPEALQAIGQKRS 236

Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G + L+I D +
Sbjct: 237 TVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDL 296

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    YP  VF    RLLER          G++TA+  +    
Sbjct: 297 SKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDNFGGGSLTALPVIETQA 356

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A +   K++  ++ 
Sbjct: 357 GDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMK 416

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 417 LELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQ 457


>gi|332990716|gb|AEF09699.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 513

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELLIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|310766422|gb|ADP11372.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation
           pathway-hrcN protein [Erwinia sp. Ejp617]
          Length = 454

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 153/450 (34%), Positives = 243/450 (54%), Gaps = 20/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GK 54
           M    + L Q A+   + L     V + G ++ I+ +   + C+     +GD    Q   
Sbjct: 3   MSALQQRLTQWADQQQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSD 60

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
               L +++  + + + +  +G  + IS G  +        I  S    G V++  G+ +
Sbjct: 61  GGSVLSEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRAL 120

Query: 114 DGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +          G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FA
Sbjct: 121 EPGGHSAFAEPGSQVRAVPVLNDAPPPTERPRIATPLPTGLRAIDGLLTIGNGQRVGIFA 180

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   ++V++ ATSD S
Sbjct: 181 GAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRS 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV+
Sbjct: 241 SMERARAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVY 300

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   
Sbjct: 301 TLLPRLVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNH 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR                L  L+  +++   +  +G Y+PG D + D AV
Sbjct: 359 YPAIDVLASLSRTMSNVVEPHHMMHAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAV 418

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   II  FL+QS   + + D F++   +L
Sbjct: 419 NANDIINQFLRQS---MRAPDPFEQTQYQL 445


>gi|224583529|ref|YP_002637327.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224468056|gb|ACN45886.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322715023|gb|EFZ06594.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130251|gb|ADX17681.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326622862|gb|EGE29207.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 466

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 235/428 (54%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + ++     +   +V+  N   +++ P+
Sbjct: 35  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 92

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 93  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLE-TGA 151

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 152 LITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRA 211

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 212 DVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 271

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 272 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 331

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      +
Sbjct: 332 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALIT 391

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 392 EQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERAD 451

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 452 WEDSLQAL 459


>gi|6561636|gb|AAF16980.1|AF197648_1 ATPase alpha subunit [Trochodendron aralioides]
          Length = 415

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 167/408 (40%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|238762368|ref|ZP_04623339.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
 gi|238699353|gb|EEP92099.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
          Length = 439

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 149/413 (36%), Positives = 220/413 (53%), Gaps = 11/413 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           NL    G +  +  +      +   + +G     +   +  +  QV+  + ++ Y+ P  
Sbjct: 8   NLARVAGRLVRVNGILL--ESVGCRLAIGQRCRIESTENVFIEAQVVGFDREVTYLMPFK 65

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
             + +  G  VF     G   I     W GRV+N LG+PIDG   LG G+  ++      
Sbjct: 66  QPDGLMSGARVFPCELDGELLI--GDSWLGRVVNGLGEPIDGKGLLG-GETPLQPQLPQI 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + RQ V      G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 123 HPLQRQPVSTPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSMLLGMMTRYTQADVVVVG 182

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI        + KSVV+ A +DESP++R  A     ++A Y+  KG +V
Sbjct: 183 LIGERGREVKEFIENSLQACGMAKSVVITAPADESPLMRIRATELCHSVATYYRDKGKDV 242

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S    G +TA+ +
Sbjct: 243 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSYG-SGTMTAIYT 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +    ++ + 
Sbjct: 302 VLAEGDDQQDPIVDCARAVLDGHIVLSRQLAESGHYPAIDIGQSISRCMSQISPREQVQS 361

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              L      + E + +  +GGY  G D + D+AV   P I DFL+Q     S
Sbjct: 362 ARLLKQCYADYMEIKPLIPLGGYVAGADPMADRAVQYYPAIIDFLRQEVDQPS 414


>gi|21672300|ref|NP_660367.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|22654217|sp|O51874|ATPA_BUCAP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|21622898|gb|AAM67578.1| ATP synthase alpha chain [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 510

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 189/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++QL ++      V       G I S+      +  LS  V LG+ ++     
Sbjct: 1   MQLNSTEISQLIKERIAQFEVFNQSYNEGTIISVNDGIIKIYGLSD-VMLGEMILLP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + I  D +    +G    I+ G  V   G+   +       GR++NALG PID
Sbjct: 57  DNEYAIALNIERDTIGAVVMGPYIHITEGTKVRCTGKILEVPVGVALLGRIVNALGFPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+ + D+ + + +  P  + R+ + +  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGSI-EHDIYLPVEADAPGVIERESINEPIQTGYKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L      +        +   +G++   +   ++     D L  ++VVVA++ E+  L+
Sbjct: 176 TALAIDTIINQKKINLPCVYVAIGQKLSTIINVVKKLDEHDALLNTIVVVASASEAASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G + L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGKDALIVYDDLSKHAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSKEHVKNVTKGKITGKTGSLTALPIIETQSGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+   SVSR+   A +   KKL S +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNAGISVSRVGSAAQTKIIKKLSSGIRTALAQYHE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     I + LKQ  
Sbjct: 413 LDQTTRKQLIYGQKITELLKQKQ 435


>gi|88797169|ref|ZP_01112759.1| ATP synthase subunit A [Reinekea sp. MED297]
 gi|88780038|gb|EAR11223.1| ATP synthase subunit A [Reinekea sp. MED297]
          Length = 514

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 101/449 (22%), Positives = 186/449 (41%), Gaps = 31/449 (6%)

Query: 1   MQ-KNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           MQ  N   ++ + ++    L         G I  ++     V  L+  V  G+ +  +G 
Sbjct: 1   MQHLNPSEISDIIKERIAKLDTSSKAQNEGTIVGVSDGIVRVHGLAD-VMYGEMIEFEGG 59

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
                G  + +  D V    +G  + ++ G      GR   +       GRV++ALG  I
Sbjct: 60  ---VFGMALNLEQDSVGAVVLGDYKNLAEGQSCKCTGRILEVPVGPELLGRVVDALGNAI 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +    L+  I    P  + RQ V++  +TG + +D   P+  GQR  +      G
Sbjct: 117 DGKGDIS-AKLTDPIEKVAPGVIARQSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTG 175

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230
           K+ +   ++ A+     K +   VG++   +   +     +     + VVVA++ E   +
Sbjct: 176 KTAMAVDAILAQKGTGIKCVYVAVGQKRSTIANVVRKLEENGAMEYTTVVVASASEPASM 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +  ++ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF   
Sbjct: 236 QFLAPYSGCSMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I 
Sbjct: 296 SRLLERASRVNAEYVEEFTKGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIF 355

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +  
Sbjct: 356 LETDLFNAGVRPAMNAGISVSRVGGSAQTKIMKKLSGGIRTALAQYRE---LAAFSQFAS 412

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +D      +     + + +KQ      S
Sbjct: 413 DLDDATKAQLEHGARVTELMKQGQYSPMS 441


>gi|332289266|ref|YP_004420118.1| F0F1 ATP synthase subunit alpha [Gallibacterium anatis UMN179]
 gi|330432162|gb|AEC17221.1| F0F1 ATP synthase subunit alpha [Gallibacterium anatis UMN179]
          Length = 513

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  L++ V  G+ +      
Sbjct: 1   MQLNSTEISELIKKRIAQFEVVSEARNTGTIVSVSDGIIRIHGLTE-VMQGEMIALP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRYAIALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEYGALDNTIVVVASAAESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF ++G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRNRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEFVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKAMKKLSGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|16765310|ref|NP_460925.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62180547|ref|YP_216964.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161613459|ref|YP_001587424.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552796|ref|ZP_02346547.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167993547|ref|ZP_02574641.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168239212|ref|ZP_02664270.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168244823|ref|ZP_02669755.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168259741|ref|ZP_02681714.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168462487|ref|ZP_02696418.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168823015|ref|ZP_02835015.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194445652|ref|YP_002041237.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449682|ref|YP_002046023.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194737833|ref|YP_002115006.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197247761|ref|YP_002146051.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262536|ref|ZP_03162610.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|198245111|ref|YP_002215114.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390464|ref|ZP_03217075.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204931084|ref|ZP_03221910.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205352334|ref|YP_002226135.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856515|ref|YP_002243166.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|238912455|ref|ZP_04656292.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|120332|sp|P26465|FLII_SALTY RecName: Full=Flagellum-specific ATP synthase
 gi|154029|gb|AAA27101.1| flagellar protein [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420507|gb|AAL20884.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62128180|gb|AAX65883.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161362823|gb|ABX66591.1| hypothetical protein SPAB_01176 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404315|gb|ACF64537.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407986|gb|ACF68205.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194713335|gb|ACF92556.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195634519|gb|EDX52871.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197211464|gb|ACH48861.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240791|gb|EDY23411.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197288094|gb|EDY27481.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197939627|gb|ACH76960.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602909|gb|EDZ01455.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204320128|gb|EDZ05333.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205272115|emb|CAR36968.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205322649|gb|EDZ10488.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328423|gb|EDZ15187.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205336374|gb|EDZ23138.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205340669|gb|EDZ27433.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205350730|gb|EDZ37361.1| flagellar protein export ATPase FliI [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708318|emb|CAR32621.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261247138|emb|CBG24961.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267993961|gb|ACY88846.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158486|emb|CBW17996.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912962|dbj|BAJ36936.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085409|emb|CBY95190.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224617|gb|EFX49680.1| Flagellum-specific ATP synthase FliI [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322616965|gb|EFY13873.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618204|gb|EFY15096.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625875|gb|EFY22694.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626327|gb|EFY23137.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632742|gb|EFY29487.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322639084|gb|EFY35777.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640400|gb|EFY37056.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647239|gb|EFY43738.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649913|gb|EFY46334.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655521|gb|EFY51829.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660299|gb|EFY56537.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662980|gb|EFY59187.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668165|gb|EFY64324.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674076|gb|EFY70170.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675572|gb|EFY71646.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683017|gb|EFY79033.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686711|gb|EFY82689.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195401|gb|EFZ80581.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198071|gb|EFZ83188.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204457|gb|EFZ89463.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207547|gb|EFZ92495.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211014|gb|EFZ95874.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217532|gb|EGA02251.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219607|gb|EGA04091.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226678|gb|EGA10875.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231554|gb|EGA15667.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235997|gb|EGA20076.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240567|gb|EGA24610.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245459|gb|EGA29459.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250229|gb|EGA34121.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253960|gb|EGA37784.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323262110|gb|EGA45673.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266233|gb|EGA49723.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270658|gb|EGA54099.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326627384|gb|EGE33727.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332988861|gb|AEF07844.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 456

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 235/428 (54%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + ++     +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 83  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLE-TGA 141

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 142 LITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRA 201

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 202 DVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 261

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 262 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      +
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALIT 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 382 EQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERAD 441

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 442 WEDSLQAL 449


>gi|189017756|gb|ACD71547.1| F1-ATPase alpha subunit [Pandanus tectorius]
          Length = 399

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/389 (23%), Positives = 162/389 (41%), Gaps = 20/389 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL- 214
            +      GK+ +      +               +   +G++   V + ++     N  
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQKRSTVAQLVQILSEANAL 184

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++    
Sbjct: 185 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 244

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI 
Sbjct: 245 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 304

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +   
Sbjct: 305 DGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSLKLELAQYRE---VAAF 361

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             +   +D       ++   + +  KQ  
Sbjct: 362 AQFGSDLDAATQALPNRGARLTEVPKQPQ 390


>gi|291615578|ref|YP_003518320.1| AtpA [Pantoea ananatis LMG 20103]
 gi|291150608|gb|ADD75192.1| AtpA [Pantoea ananatis LMG 20103]
 gi|327395847|dbj|BAK13269.1| ATP synthase alpha chain AtpA [Pantoea ananatis AJ13355]
          Length = 513

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSADYVERFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|258622936|ref|ZP_05717951.1| ATP synthase subunit A [Vibrio mimicus VM573]
 gi|262166764|ref|ZP_06034501.1| ATP synthase alpha chain [Vibrio mimicus VM223]
 gi|262172743|ref|ZP_06040421.1| ATP synthase alpha chain [Vibrio mimicus MB-451]
 gi|258584719|gb|EEW09453.1| ATP synthase subunit A [Vibrio mimicus VM573]
 gi|261893819|gb|EEY39805.1| ATP synthase alpha chain [Vibrio mimicus MB-451]
 gi|262026480|gb|EEY45148.1| ATP synthase alpha chain [Vibrio mimicus VM223]
          Length = 513

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  +  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-IMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +G   L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPIG-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +         K ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|206603288|gb|EDZ39768.1| ATP synthase F1, alpha subunit [Leptospirillum sp. Group II '5-way
           CG']
          Length = 512

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 94/421 (22%), Positives = 170/421 (40%), Gaps = 14/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           + L  L       +    G I  +      +  L +    G+ +            V+ +
Sbjct: 20  DILKSLNAFRGGVISDDRGTILEVGDGIIRIAGLEK-AKAGEMLELVRGGK---ALVLNL 75

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             + V    +   E++  GD V    R   +       GRV+NALG+PIDG   +    +
Sbjct: 76  EENEVGAALLEATEDVRAGDEVRTTSRVMEVPVGPELVGRVVNALGQPIDGKGDI-PAKM 134

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +    P    R+ V    +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 135 TSPVEKVAPGVATRKAVGVPLQTGIKAIDAMIPVGRGQRELIIGDRQTGKTTIALDTILN 194

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTI 241
           +       I   +G++   V   +     +     ++VV A++ E   L+ +AP     +
Sbjct: 195 QKGKNVVCIYVAIGQKASSVVNAVNILEKNGAMEYTIVVSASASEQAALQYLAPYAGCAM 254

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF  +  + L++ D +T+ A + R+++      P    YP  VF    RLLER    +
Sbjct: 255 GEYFRDRNQDALIVYDDLTKHAWAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAARLD 314

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +    G++TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR
Sbjct: 315 ENHGGGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFYSGIRPAINPGISVSR 374

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++   L   + +F E   +     +   +D      + +   + + LKQ
Sbjct: 375 VGGAAQIKAMKQVAGKLRLEMAQFRE---LAAFAQFASDLDKTTRDQIERGLRLTEILKQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|167748910|ref|ZP_02421037.1| hypothetical protein ANACAC_03684 [Anaerostipes caccae DSM 14662]
 gi|167651532|gb|EDR95661.1| hypothetical protein ANACAC_03684 [Anaerostipes caccae DSM 14662]
          Length = 502

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 183/423 (43%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L    EDY   + VQ  G +  +     TV  L+ +   G+ V  +       G V 
Sbjct: 13  ISVLKSEIEDYENKIEVQEEGTVIQVGDGIATVHGLN-HAMYGELVEFENG---TRGIVQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            + +  +    +G    +  G  V   G R  +       GRV+NALG PIDG+  + K 
Sbjct: 69  NLEMKTIGCVLLGSDHGLIEGSKVVRSGKRAGVPVGDALVGRVVNALGAPIDGNGPI-KT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + I  +    ++R+ V+   +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 128 DGYLPIEREAAGVIDRKSVDVPLETGILAIDAMFPIGRGQRELIIGDRQTGKTSIAVDTI 187

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G++   + + +      D +  S+VV A++ +   ++ +AP +  
Sbjct: 188 LNQKGKDVICVYVAIGQKASTLAKIVSTLKKHDAMDYSIVVSASASDVAPVQYIAPYSGT 247

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 248 AMAEYFMDKGKDVLIVYDDLSKHAVAYRAMSLLLQRPPGREAYPGDVFYLHSRLLERSCR 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 308 LNEEHGGGSITALPIIETLAGDVSAYIPTNVISITDGQIFLESDLFFSGIRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK+  SL   + +F E     +   +   +D    + +     + + L
Sbjct: 368 SRVGGAAQTKAMKKVSGSLRIDLAQFREME---VFTQFSSDLDPQTKELLDHGNRLVELL 424

Query: 418 KQS 420
           KQ 
Sbjct: 425 KQP 427


>gi|34539365|gb|AAQ74566.1| F1-ATPase alpha subunit [Michelia figo]
          Length = 418

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 92/412 (22%), Positives = 169/412 (41%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 357 RGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 405


>gi|260577555|ref|ZP_05845494.1| ATP synthase F1, alpha subunit [Corynebacterium jeikeium ATCC
           43734]
 gi|258604279|gb|EEW17517.1| ATP synthase F1, alpha subunit [Corynebacterium jeikeium ATCC
           43734]
          Length = 556

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/438 (24%), Positives = 186/438 (42%), Gaps = 23/438 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +A     YS     +  G +++       V+ +   V   + +   G     +G    
Sbjct: 24  SAIANYTSSYSPEASREEVGVVTAAADGIAQVSGM-PSVMANELLEFPGG---VIGVAQN 79

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+ IDG   + + +
Sbjct: 80  LDTDSVGVVILGNFETLKEGDEVKRTGEVLSIPVGEKFLGRVINPLGQAIDGLGDI-ESE 138

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 139 EERALELQAPSVLMRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTSVCIDTIL 198

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +        D     + I   VG++G  +    +        + + +V A + +S   + 
Sbjct: 199 NQRDNWATGDPKQQVRCIYVAVGQKGSTIASIRKTLEDHGALEYTTIVAAPASDSAGFKW 258

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   + +++  +G +VL+I D +T+ A + R I+      P    YP  VF    R
Sbjct: 259 LAPFTGAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 318

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +    ++ +  I  +V SI DG + L   L  +G  P 
Sbjct: 319 LLERAAKLNDELGGGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGVRPA 378

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      + + 
Sbjct: 379 INVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFAAFASDLDPASKAQLERG 435

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ  ++  S +
Sbjct: 436 KRLVELLKQKETEPQSVE 453


>gi|240145790|ref|ZP_04744391.1| ATP synthase F1, alpha subunit [Roseburia intestinalis L1-82]
 gi|257202123|gb|EEV00408.1| ATP synthase F1, alpha subunit [Roseburia intestinalis L1-82]
          Length = 500

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 15/420 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L    E+Y       + G +  +     T+  + ++   G+ V+ +       G V  I 
Sbjct: 13  LKTEIENYDMVSKDQEVGTVIWVGDGIATIYGI-EHAMYGEIVIFENG---VRGMVQDIK 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V     G   EI  G  V    +   I     + GR+INALG PIDG   + K D  
Sbjct: 69  RDQVGCIIFGKDTEIKEGTKVTRTKKKAGIPVGDAYLGRIINALGAPIDGKGEI-KADDY 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I  + P  ++RQ V++  +TGI  ID   P+  GQR  +      GK+++      + 
Sbjct: 128 RAIEQEAPGIVDRQSVKQPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAVDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V + +     +     S+V+ +T+ ES  L+ +AP     +A
Sbjct: 188 KGKDVVCIYVAIGQKASTVAKLVNTLTKNGAMDYSIVLSSTASESASLQYIAPYAGTALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER      
Sbjct: 248 EYFMYKGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSKLND 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVSR+
Sbjct: 308 ELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGMRPAVNVGLSVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK   ++   + ++ E     +   +   +D +  + +     + + LKQ 
Sbjct: 368 GGAAQTKAMKKASGTIRIDLAQYREME---VFTQFSSDLDDMTKEQLQYGKGLMELLKQP 424


>gi|148927853|ref|ZP_01811272.1| ATP synthase F1, alpha subunit [candidate division TM7 genomosp.
           GTL1]
 gi|147886798|gb|EDK72349.1| ATP synthase F1, alpha subunit [candidate division TM7 genomosp.
           GTL1]
          Length = 526

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 164/446 (36%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q   +++ +  + + G +  +      V  L   V  G+ V  +          + 
Sbjct: 11  AILRQQLSNFNASADLEEVGSVLQVGDGIARVYGLG-NVRYGELVEFENG---VRAIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  G  V   G+   I       GRV+N LG PIDG   +    
Sbjct: 67  LEEDNVGVVLMGETGGIQEGSKVSRTGQIASIKVGEGMVGRVVNTLGLPIDGKGPITGER 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + R+ V++  +TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 127 YEMPLERKAPGVIFREPVKEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 186

Query: 184 SDCF-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +             I   +G++   +   ++          + +V A++ +   L+  AP
Sbjct: 187 NQKEFFKAGKPVYCIYVAIGQKASTIAGVMKTLQDAGAMEYTTIVAASASDPAPLQFYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I E+F   G   L+I D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 247 FAGAAIGEFFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                            G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RAAKVINNDEIVKNMNDLPESIRHLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L  +L   G  P ++   SVSR+   A     KK+  +L      + E         +
Sbjct: 367 IFLESNLFLSGIRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQALYRELE---AFSKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D      + +     + LKQ  
Sbjct: 424 GGDLDAATKNVIDKGARNVEVLKQPQ 449


>gi|84393414|ref|ZP_00992171.1| ATP synthase subunit A [Vibrio splendidus 12B01]
 gi|84375930|gb|EAP92820.1| ATP synthase subunit A [Vibrio splendidus 12B01]
          Length = 513

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++    ++  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGILSIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +N D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           +VVVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|78224301|ref|YP_386048.1| ATPase FliI/YscN [Geobacter metallireducens GS-15]
 gi|78195556|gb|ABB33323.1| type III secretion system ATPase, FliI/YscN [Geobacter
           metallireducens GS-15]
          Length = 443

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 153/408 (37%), Positives = 227/408 (55%), Gaps = 10/408 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +   G ++ +  +   +        +G    VH         +V+    +   + P+G  
Sbjct: 21  IRFHGKVTQVVGLV--IEGYCPDAAVGTLCHVHPHDGDPIPAEVVGFRDNKTLLMPLGEL 78

Query: 79  EEISLGDL--VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
             + LG L  V    +  +       GRVI+ LG+PID    L   +    I +     M
Sbjct: 79  RGVGLGSLISVKR-KKSSLGVGPGLLGRVIDGLGEPIDDKGPLATRE-EYPIYANPVNPM 136

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ + +    GIR I+       GQR+G+ AGSG+GKSTLL M AR    D  +I+L+G
Sbjct: 137 KRRPIREPLDLGIRAINGLLTCGKGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIG 196

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REFI +D   + LKKSVVVVATSD+ P++R      A TIAEYF ++G  VLL+
Sbjct: 197 ERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLM 256

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS TRFA ++RE+    GE P  +GY  SVF+ LP+LLER G      G+IT + +VLV
Sbjct: 257 MDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTGNF--MDGSITGLYTVLV 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+P++D++RSILDGHIVLNR LA    YPP+D LAS SR+        +++  S 
Sbjct: 315 EGDDFNEPVSDAMRSILDGHIVLNRELAARAIYPPIDVLASASRVMMDVTERGQQQFASR 374

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              L+   ++  D+  IG Y+PG +  +D A+ ++  +  +++Q   D
Sbjct: 375 FKELLAAHKQAEDLINIGAYKPGSNPTIDYAISKMEGMVGYIRQGIHD 422


>gi|192362476|ref|YP_001984262.1| F0F1 ATP synthase subunit alpha [Cellvibrio japonicus Ueda107]
 gi|226739855|sp|B3PIS9|ATPA_CELJU RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190688641|gb|ACE86319.1| ATP synthase F1, alpha subunit [Cellvibrio japonicus Ueda107]
          Length = 514

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 96/447 (21%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S+T     +  L++ V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKQRIAGLEFSTEAQNEGTVVSVTDGIIRIHGLAE-VMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVILGDYRGVAEGQKCKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +        +    P  + R+ V++  + G++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGPINTSQTDA-VEKIAPGVIWRKSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      K I   +G++   +   +           ++V+ AT+ +   ++ 
Sbjct: 178 AIAVDAIINQKGSGIKCIYVAIGQKASSIASVVRKLEEHGAMDHTIVIAATASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G + L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +             + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            S+   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SSMFNAGVRPSMNAGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DEATKSQLEHGQRVTELMKQKQFAPLS 441


>gi|6561615|gb|AAF16959.1|AF197627_1 ATPase alpha subunit [Ceratophyllum demersum]
 gi|6561616|gb|AAF16960.1|AF197628_1 ATPase alpha subunit [Ceratophyllum submersum]
          Length = 418

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 94/411 (22%), Positives = 169/411 (41%), Gaps = 23/411 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V + 
Sbjct: 57  LVKRTGSILDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++   G N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILSGANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  S    + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 403


>gi|260774964|ref|ZP_05883864.1| ATP synthase alpha chain [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609054|gb|EEX35213.1| ATP synthase alpha chain [Vibrio coralliilyticus ATCC BAA-450]
          Length = 502

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 187/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  LS  +    P  ++RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLSSPVEVIAPGVIDRQSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSAEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|68536422|ref|YP_251127.1| F0F1 ATP synthase subunit alpha [Corynebacterium jeikeium K411]
 gi|109939720|sp|Q4JUJ8|ATPA_CORJK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|68264021|emb|CAI37509.1| ATP synthase alpha chain [Corynebacterium jeikeium K411]
          Length = 545

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/438 (24%), Positives = 186/438 (42%), Gaps = 23/438 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +A     YS     +  G +++       V+ +   V   + +   G     +G    
Sbjct: 13  SAIANYTSSYSPEASREEVGVVTAAADGIAQVSGM-PSVMANELLEFPGG---VIGVAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+ IDG   + + +
Sbjct: 69  LDTDSVGVVILGNFETLKEGDEVKRTGEVLSIPVGEKFLGRVINPLGQAIDGLGDI-ESE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 128 EERALELQAPSVLMRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTSVCIDTIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +        D     + I   VG++G  +    +        + + +V A + +S   + 
Sbjct: 188 NQRDNWATGDPKQQVRCIYVAVGQKGSTIASIRKTLEDHGALEYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   + +++  +G +VL+I D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPFTGAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++TA+  +    ++ +  I  +V SI DG + L   L  +G  P 
Sbjct: 308 LLERAAKLNDELGGGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      + + 
Sbjct: 368 INVGVSVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLEAFAAFASDLDPASKAQLERG 424

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ  ++  S +
Sbjct: 425 KRLVELLKQKETEPQSVE 442


>gi|94501604|ref|ZP_01308121.1| ATP synthase F1, alpha subunit [Oceanobacter sp. RED65]
 gi|94426287|gb|EAT11278.1| ATP synthase F1, alpha subunit [Oceanobacter sp. RED65]
          Length = 514

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 93/442 (21%), Positives = 178/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G I S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEVIKKRIEKLDVASEARTEGTIVSVSDGIVRIHGLAD-VMYGEMIEFDGS-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR    P      GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAIVLGDYLGLAEGQKARCTGRILEVPTGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + +   +  I    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPI-EAKQTTPIERIAPGVIARQGVDQPVQTGYKAVDAMVPIGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            L      +  +   K +   +G++   +   +           +++V A++ +   ++ 
Sbjct: 178 ALAVDAIINQKNSGIKCVYVAIGQKQSSIANVVRKLEEHGAMDNTIIVAASASDPASMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           ++      + EYF  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LSAYAGCAMGEYFRDRGEDALIIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNAEYVEQFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A +    KL   +   + ++ E   +     +   +
Sbjct: 358 TNLFNSGIRPAMNAGISVSRVGGAAQTKIISKLGGGIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +     + + +KQ  
Sbjct: 415 DDATREQLEHGKTVTELMKQKQ 436


>gi|157147117|ref|YP_001454436.1| hypothetical protein CKO_02894 [Citrobacter koseri ATCC BAA-895]
 gi|157084322|gb|ABV14000.1| hypothetical protein CKO_02894 [Citrobacter koseri ATCC BAA-895]
          Length = 439

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 151/411 (36%), Positives = 227/411 (55%), Gaps = 7/411 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           +L    G +  +  +     C+   + +G     +  + + +  QV+  + D+ Y+ P  
Sbjct: 17  DLARVAGRLVRVNGILL--ECVGCRLAVGQMCHVESVDQEMMDAQVVGFDRDVTYLMPFK 74

Query: 77  IGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G  VF  G+   +     W GRV+N LG+P+D    LG GD  +         
Sbjct: 75  HPSGLIAGARVFPAGKTEGVMIGDQWLGRVVNGLGEPLDNKGKLG-GDTLLAQQLPQVHP 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQ V      G+R I+    +  GQR+G+ AGSG+GKS LL M  R    + V++ L+
Sbjct: 134 LKRQPVHAPLDVGVRAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRYTRAEVVVVGLI 193

Query: 196 GERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EFIE+    + L KSV+V A +DESP++R  A     TIA Y+  KG +VLL
Sbjct: 194 GERGREVKEFIENALQAEGLAKSVIVAAPADESPLMRIKATELCHTIASYYRDKGKDVLL 253

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA + GE P  +GYP S F  +PRL+E  G SE  +G++TA+ +VL
Sbjct: 254 LVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPRLVESAGNSES-EGSMTAIYTVL 312

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +    + +    
Sbjct: 313 AEGDDQQDPIVDCARAVLDGHIVLSRHLAEAGHYPAIDVGQSISRCMSQVTEREHQLAAR 372

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +L  L   ++  + +  +GGY  G D + D+AV   P I  FL+Q   D +
Sbjct: 373 TLKQLYAEYQSIKPLIPLGGYVAGADPLADRAVRLSPAINQFLQQEVQDAA 423


>gi|6561613|gb|AAF16957.1|AF197625_1 ATPase alpha subunit [Ginkgo biloba]
          Length = 408

 Score =  294 bits (752), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 93/416 (22%), Positives = 169/416 (40%), Gaps = 23/416 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GD
Sbjct: 1   VVSVXDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLEDENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G    +       GRV++ALG PIDG  +    +    + +K P  + R+ V + 
Sbjct: 57  LVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGASSDHE-RRRVEAKAPGIIERKSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRMNSKGTSDSEKLYCVYV 175

Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     D L+ S++V AT+ +    + +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQIISEADALEYSIIVAATASDPAPPQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           ++  S      ++ E   +     +   +D       ++   + +  KQ      S
Sbjct: 356 QVRGSSKPESAQYRE---VAASAQFGSDLDAATQAPSNRGARLTEVPKQPQYPPLS 408


>gi|239993100|ref|ZP_04713624.1| F0F1 ATP synthase subunit alpha [Alteromonas macleodii ATCC 27126]
          Length = 513

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 183/448 (40%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +   +   V       G I ++T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKKRIEQFNVSSEARNEGTIVAVTDGIIRIHGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYAIALNLERDSVGAVVMGPYADLKEGDKVQSTGRILEVPVGNALLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++        +    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAIDAAGFE-PVEKIAPGVIERQSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K +   VG++   +   +           ++VV A++ ES  L+
Sbjct: 176 TAMAVDAIINQKGTGIKCVYVAVGQKASTIANVVRKLEEHGALDHTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEQYVERYTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAVNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    + +     + + +KQ      S
Sbjct: 413 LDDATREQLEHGERVTELMKQKQYAPLS 440


>gi|149173277|ref|ZP_01851908.1| ATP synthase subunit A [Planctomyces maris DSM 8797]
 gi|148848083|gb|EDL62415.1| ATP synthase subunit A [Planctomyces maris DSM 8797]
          Length = 505

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 169/432 (39%), Gaps = 20/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +QK +E      E        + G +  +      V  LS  +  G+ V          G
Sbjct: 12  IQKEIEDFRGEIET------SEVGRVLEVGDGIARVYGLSSAMS-GEMVEFSNG---VRG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           QV  +  + V I   G    I+ GD V   G    I       GRV++ LG P+DG   +
Sbjct: 62  QVFNLEENSVGIIIFGDYLAIAEGDEVRSTGTLLSIPVGDELLGRVVDPLGIPLDGKGPI 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S  +    P    RQ V++   TGI+ ID  TP+  GQR  +      GK+ +  
Sbjct: 122 VATE-SRPLEYAAPGVAARQPVKQPMATGIKAIDAMTPVGRGQRELIIGDRKTGKTAIAI 180

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        +    G+R   +   +           +VVV A+S +   L+ +AP 
Sbjct: 181 DTILNQKGKDVICVYVGCGQRAATIAGIVNQLQEHGAMDYTVVVSASSSDPAPLQYIAPY 240

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAE++  +G + L++ D +++ A + R+++      P    YP  VF    RLLER
Sbjct: 241 AGAAIAEHYMYQGKHTLVVYDDLSKQAQAYRQLSLLMRRPPGREAYPGDVFYCHSRLLER 300

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G++TA+  +       +  I  +V SI DG I L   L   G  P ++  
Sbjct: 301 SARLSDELGGGSMTALPIIETLEGEVSAYIPTNVISITDGQIYLEPDLFFAGIRPAINVG 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   K +  SL   +  F E             +D      + +   + 
Sbjct: 361 ISVSRVGGNAQTKATKSVSGSLRLDLAAFRELE---AFAQMGTELDKATQAQLDRGYRMV 417

Query: 415 DFLKQSPSDLSS 426
           + LKQ   +  S
Sbjct: 418 ELLKQPQFNPMS 429


>gi|6561700|gb|AAF17044.1|AF197712_1 ATPase alpha subunit [Grevillea robusta]
          Length = 406

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 21/406 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVFGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGER 198
           G++ +D   P+  GQR  +      GK+ +      +               +   +G++
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           G  V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 GSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 398


>gi|54310644|ref|YP_131664.1| F0F1 ATP synthase subunit alpha [Photobacterium profundum SS9]
 gi|81614783|sp|Q6LLG6|ATPA1_PHOPR RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|46915087|emb|CAG21862.1| Putative AtpA, ATP synthase F1, alpha subunit [Photobacterium
           profundum SS9]
          Length = 513

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 32/454 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISALIKQRIEKFNVASEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G    +  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFALALNLERDSVGAVVMGPYANLQEGMKVTGTGRILEVPVGPALLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETETFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  +       +   +G++   +   +           ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKQSGIYSVYVAIGQKASTIANVVRKLEEHGALDNTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSENYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGIRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +D    K +     + + +KQ     +   VF++
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 444


>gi|86147156|ref|ZP_01065472.1| ATP synthase subunit A [Vibrio sp. MED222]
 gi|85835040|gb|EAQ53182.1| ATP synthase subunit A [Vibrio sp. MED222]
          Length = 513

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++    ++  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGILSIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +N D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           +VVVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|124516447|gb|EAY57955.1| ATP synthase F1, alpha subunit [Leptospirillum rubarum]
          Length = 512

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 94/421 (22%), Positives = 170/421 (40%), Gaps = 14/421 (3%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           + L  L       +    G I  +      +  L +    G+ +            V+ +
Sbjct: 20  DILKNLNAFRGGVISDDRGTILEVGDGIIRIAGLEK-AKAGEMLELVRGGK---ALVLNL 75

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             + V    +   E++  GD V    R   +       GRV+NALG+PIDG   +    +
Sbjct: 76  EENEVGAALLEATEDVRAGDEVRTTSRVMEVPVGPELVGRVVNALGQPIDGKGDI-PAKM 134

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182
           +  +    P    R+ V    +TGI+ ID   P+  GQR  +      GK+T+   ++  
Sbjct: 135 TSPVEKVAPGVATRKAVGVPLQTGIKAIDAMIPVGRGQRELIIGDRQTGKTTIALDTILN 194

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTI 241
           +       I   +G++   V   +     +     ++VV A++ E   L+ +AP     +
Sbjct: 195 QKGKNVICIYVAIGQKASSVVNAVNILEKNGAMEYTIVVSASASEQAALQYLAPYAGCAM 254

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF  +  + L++ D +T+ A + R+++      P    YP  VF    RLLER    +
Sbjct: 255 GEYFRDRNQDALIVYDDLTKHAWAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAARLD 314

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +    G++TA+  +     + +  +  +V SI DG I L   L   G  P ++P  SVSR
Sbjct: 315 ENHGGGSLTALPIIETQAGDVSAFVPTNVISITDGQIYLETDLFYSGIRPAINPGISVSR 374

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +   A     K++   L   + +F E   +     +   +D      + +   + + LKQ
Sbjct: 375 VGGAAQIKAMKQVAGKLRLEMAQFRE---LAAFAQFASDLDKTTRDQIERGLRLTEILKQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|227874108|ref|ZP_03992314.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227840020|gb|EEJ50444.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 673

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 187/426 (43%), Gaps = 15/426 (3%)

Query: 2   QKNLETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q  +  L    ED+  K    + G++SS+      +  L  +   G+ VV         G
Sbjct: 174 QDIISILQSSVEDFDLKAEKKEIGFVSSVGDGIVIINGL-DHAMYGEIVVFDNG---VRG 229

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
            V  I  + + +   G  E I  G  V    +   I     + GRV++ALG PIDG+ ++
Sbjct: 230 MVQNIERNRIGVILFGDEEGIIEGSRVVRSNKMAGIPVGDAYLGRVVDALGAPIDGEGAI 289

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    I    P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++  
Sbjct: 290 NTKEYR-PIEEPAPGIIDRKSVNVPLQTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAI 348

Query: 180 MFARSDCFD--KVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   +   +E+    + +  + VV AT+ +   ++ +AP 
Sbjct: 349 DTILNQKGKDCICIYVAIGQKESTIASLVENLKKNEAMSYTCVVAATAADPAPIQYIAPY 408

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VL++ D +++ A + R ++   G  P    YP  VF    RLLER
Sbjct: 409 AATSLAEYFMYQGRDVLIVYDDLSKHAVAYRALSLLLGRAPGREAYPGDVFYLHSRLLER 468

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  I  +V SI DG I L  +L  EG+ P V+  
Sbjct: 469 SCRLSDALGGGSITALPIIETLDGDVSAYIPTNVISITDGQIFLESNLFFEGQRPAVNVG 528

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK   SL   + ++ E   + +   +   +D      + Q  I+ 
Sbjct: 529 LSVSRVGGAAQTKAMKKAAGSLRIDLAQYRE---MAVFTQFSSDLDESTKTQLEQGAILM 585

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 586 ELLKQP 591


>gi|59713173|ref|YP_205949.1| F0F1 ATP synthase subunit alpha [Vibrio fischeri ES114]
 gi|197333882|ref|YP_002157353.1| ATP synthase F1, alpha subunit [Vibrio fischeri MJ11]
 gi|75431407|sp|Q5E1N5|ATPA_VIBF1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739954|sp|B5FCZ3|ATPA_VIBFM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|59481274|gb|AAW87061.1| ATP synthase F1, alpha subunit [Vibrio fischeri ES114]
 gi|197315372|gb|ACH64819.1| ATP synthase F1, alpha subunit [Vibrio fischeri MJ11]
          Length = 513

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 103/456 (22%), Positives = 189/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEKFNVVTEARNEGTIVSVSDGIINIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +N D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVSEAYVERFTNGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 QTELFTAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYREL---AAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDDATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 446


>gi|10039450|dbj|BAB13358.1| H+-ATPase alpha subunit [Brevibacterium flavum]
          Length = 547

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 108/436 (24%), Positives = 184/436 (42%), Gaps = 27/436 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 65  VAQNLEADRVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEAFLGRVINPLGQPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 ASEEDRV-LELQAPTVLERQPVEEPLATGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +    +        + + +V A + ++ 
Sbjct: 184 DTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQGALEYTTIVAAPASDAA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G+ITA+  +    ++ +  I  +V SI DG + L   L   G
Sbjct: 304 LHSRLLERAAKLSDELGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNRG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  F   RD+     +   +D      
Sbjct: 364 IRPAINVGVSVSRVGGAAQTKGMKKVAGSLRLDLAAF---RDLEAFATFASDLDAASKSQ 420

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   +   L QS +
Sbjct: 421 LERGQRLVQLLIQSEN 436


>gi|89072274|ref|ZP_01158853.1| putative flagellum-specific ATP synthase [Photobacterium sp. SKA34]
 gi|89051806|gb|EAR57258.1| putative flagellum-specific ATP synthase [Photobacterium sp. SKA34]
          Length = 449

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 154/431 (35%), Positives = 236/431 (54%), Gaps = 6/431 (1%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-G 60
           +   ++L  LA   S  +    G +  +  +      +     L    +    + + +  
Sbjct: 3   RLQADSLTALAALDSVPIARVTGRLVKVNGLMLQ--AVGCRFKLDQRCLIVADDGEQIEA 60

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           QV+  + +I Y+ PV     +  G  V    G   ++ S  W GRV+N LG+P+D    L
Sbjct: 61  QVVGFDHNIAYLMPVRQLGGLYAGAKVIPIQGGSTVNVSHKWIGRVVNGLGEPLDNGLPL 120

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G+  + +  K    M RQ VE     GI+ I+    +  GQRIG+ AGSG+GKS L+ 
Sbjct: 121 QGGEC-LSLEPKPINPMKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLMG 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M  +    D +++ L+GERGREVREFI      +  K++V++ A +DESP++R  A    
Sbjct: 180 MITKYTAADIIVVGLIGERGREVREFIERSLGEEGRKRAVIIAAPADESPLMRLRATKLC 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G +VLL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G
Sbjct: 240 HRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++TA+ +VL +GD+  DP+ DS R+ILDGHIVL+R+LAE+G YP +D  AS+S
Sbjct: 300 NGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASIS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R            + +    L   +++ +++  +GGY+ G D  LD+AV   P +  FL+
Sbjct: 360 RCMSNCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFLQ 419

Query: 419 QSPSDLSSEDV 429
           Q  ++      
Sbjct: 420 QPVTEHCDYQA 430


>gi|256028113|ref|ZP_05441947.1| F0F1 ATP synthase subunit alpha [Fusobacterium sp. D11]
          Length = 439

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 163/374 (43%), Gaps = 10/374 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V    +G    I  GD V   G+    P      GRVINALG PIDG   +
Sbjct: 1   MALNLEEDNVGAVILGNASLIKEGDEVRATGKVVSVPTGDELLGRVINALGDPIDGKGEI 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D  M I  K    ++RQ V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 61  -HADKYMPIERKASGIISRQPVSEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAIAI 119

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +      K I   +G++   V +  +          +++V AT+ E+  L+ MAP 
Sbjct: 120 DTIINQKGQDVKCIYVAIGQKRSTVAQIYKKLRDLGCMDYTIIVAATASEAAPLQYMAPY 179

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           + V I EYF  +G++VL+I D +++ A + RE++      P    YP  VF    RLLER
Sbjct: 180 SGVAIGEYFMDRGEHVLIIYDDLSKHAVAYREMSLLLRRPPGREAYPGDVFYLHSRLLER 239

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P ++  
Sbjct: 240 AAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESQLFNSGFRPAINAG 299

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++ S +   + ++ E   +     +   +D      + +   I 
Sbjct: 300 ISVSRVGGAAQIKAMKQVASKVKLELAQYTE---LLTFAQFGSDLDKATKAQLERGHRIM 356

Query: 415 DFLKQSPSDLSSED 428
           + LKQ      S +
Sbjct: 357 EILKQPQYHPFSVE 370


>gi|145295349|ref|YP_001138170.1| F0F1 ATP synthase subunit alpha [Corynebacterium glutamicum R]
 gi|158513591|sp|A4QDH1|ATPA_CORGB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|140845269|dbj|BAF54268.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 547

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 107/436 (24%), Positives = 184/436 (42%), Gaps = 27/436 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 65  VAQNLEADRVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEAFLGRVINPLGQPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 ASEEDRV-LELQAPTVLERQPVEEPLATGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +    +        + + +V A + ++ 
Sbjct: 184 DTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQGALEYTTIVAAPASDAA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G+ITA+  +    ++ +  I  +V SI DG + L   L   G
Sbjct: 304 LHSRLLERAAKLSDDLGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNRG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  F   RD+     +   +D      
Sbjct: 364 IRPAINVGVSVSRVGGAAQTKGMKKVAGSLRLDLAAF---RDLEAFATFASDLDAASKSQ 420

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   +   L QS +
Sbjct: 421 LERGQRLVQLLIQSEN 436


>gi|52631924|gb|AAU85374.1| putative ATPase [Sinorhizobium fredii]
          Length = 451

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 152/432 (35%), Positives = 231/432 (53%), Gaps = 11/432 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDN 58
           ++  + +L   A+     +V   G I+        +  +     +G+  + Q        
Sbjct: 16  LEPAISSLWSTAKRIDTRVVR--GRITRAVGTL--IHAVLPEARIGELCLLQDTRTGLSL 71

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
             +VI +  + V + P+G    +S    V   GR R  P      GRVI++  +P+DG  
Sbjct: 72  EAEVIGLLDNGVLLTPIGGLAGLSSRAEVVSTGRMREVPIGPDLLGRVIDSRCRPLDGKG 131

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   ++   +  + P  M R+ VE+ F  G+R +D       GQRIG++   G GKSTL
Sbjct: 132 EVKTTEVR-PLHGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTL 190

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           +S   +    D VI++L+GERGREVREF+      + L++++VVV TSD S   R     
Sbjct: 191 ISQIVKGAAADVVIVALIGERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAP 250

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G  V L+LDS+TRF  ++REI   +GE P  RG+P SVF+ LP LLER
Sbjct: 251 MATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLER 310

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  E  +G+ITA  +VLV+GD   DPIA+  R I+DGHIVL+R+LA    +P +D L S
Sbjct: 311 AGMGE--RGSITAFYTVLVEGDGTGDPIAEESRGIVDGHIVLSRALAARSHFPAIDVLQS 368

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            SR+ D   S   +K  S    L+ R+ E   +  +G Y+ G D + D+AV  +  + +F
Sbjct: 369 RSRVMDAVVSETHRKAASFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEF 428

Query: 417 LKQSPSDLSSED 428
           L+QS  ++S  +
Sbjct: 429 LRQSEDEVSDFE 440


>gi|16520041|ref|NP_444161.1| ATPase RhcN for type III secretion [Sinorhizobium fredii NGR234]
 gi|2493150|sp|P55717|Y4YI_RHISN RecName: Full=Probable ATP synthase y4yI
 gi|2182734|gb|AAB91948.1| ATPase RhcN for type III secretion [Sinorhizobium fredii NGR234]
          Length = 451

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 231/432 (53%), Gaps = 11/432 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDN 58
           ++  + +L   A+     +V   G I+        +  +     +G+  + Q        
Sbjct: 16  LEPAISSLWSTAKRIDTRVVR--GRITRAVGTL--IHAVLPEARIGELCLLQDTRTGLSL 71

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117
             +VI +  + V + P+G    +S    V   GR R  P      GRVI++  +P+DG  
Sbjct: 72  EAEVIGLLDNGVLLTPIGGLAGLSSRAEVVSTGRMREVPIGPDLLGRVIDSRCRPLDGKG 131

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   ++   +  + P  M R+ VE+ F  G+R +D       GQRIG++   G GKSTL
Sbjct: 132 EVKTTEVR-PLHGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTL 190

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           +S   +    D VI++L+GERGREVREF+      + L++++VVV TSD S   R     
Sbjct: 191 ISQIVKGAAADVVIVALIGERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAP 250

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G  V L+LDS+TRF  ++REI   +GE P  RG+P SVF+ LP LLER
Sbjct: 251 MATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLER 310

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  E  +G+ITA  +VLV+GD   DPIA+  R ILDGHIVL+R+LA    +P +D L S
Sbjct: 311 AGLGE--RGSITAFYTVLVEGDGTGDPIAEESRGILDGHIVLSRALAARSHFPAIDVLQS 368

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            SR+ D   S   +K  S    L+ R+ E   +  +G Y+ G D + D+AV  +  + +F
Sbjct: 369 RSRVMDAVVSETHRKAASFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEF 428

Query: 417 LKQSPSDLSSED 428
           L+QS  ++S  +
Sbjct: 429 LRQSEDEVSDFE 440


>gi|317472677|ref|ZP_07931992.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
 gi|316899854|gb|EFV21853.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
          Length = 499

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 183/423 (43%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L    EDY   + VQ  G +  +     TV  L+ +   G+ V  +       G V 
Sbjct: 10  ISVLKSEIEDYENKIEVQEEGTVIQVGDGIATVHGLN-HAMYGELVEFENG---TRGIVQ 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            + +  +    +G    +  G  V   G R  +       GRV+NALG PIDG+  + K 
Sbjct: 66  NLEMKTIGCVLLGSDHGLIEGSKVVRSGKRAGVPVGDALVGRVVNALGAPIDGNGPI-KT 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + I  +    ++R+ V+   +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 125 DGYLPIEREAAGVIDRKSVDVPLETGILAIDAMFPIGRGQRELIIGDRQTGKTSIAVDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G++   + + +      D +  S+VV A++ +   ++ +AP +  
Sbjct: 185 LNQKGKDVICVYVAIGQKASTLAKIVSTLKKHDAMDYSIVVSASASDVAPVQYIAPYSGT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 245 AMAEYFMDKGKDVLIVYDDLSKHAVAYRAMSLLLQRPPGREAYPGDVFYLHSRLLERSCR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 305 LNEEHGGGSITALPIIETLAGDVSAYIPTNVISITDGQIFLESDLFFSGIRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK+  SL   + +F E     +   +   +D    + +     + + L
Sbjct: 365 SRVGGAAQTKAMKKVSGSLRIDLAQFREME---VFTQFSSDLDPQTKELLDHGNRLVELL 421

Query: 418 KQS 420
           KQ 
Sbjct: 422 KQP 424


>gi|134280666|ref|ZP_01767376.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
 gi|167725915|ref|ZP_02409151.1| flagellum-specific ATP synthase [Burkholderia pseudomallei DM98]
 gi|167905075|ref|ZP_02492280.1| flagellum-specific ATP synthase [Burkholderia pseudomallei NCTC
           13177]
 gi|134247688|gb|EBA47772.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
          Length = 435

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 166/438 (37%), Positives = 236/438 (53%), Gaps = 12/438 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           L  L  L E  S  +    G ++ +T +    +     +  G+  V +  + D +  QV+
Sbjct: 3   LSALRNL-ELDSVPVARMTGRLTGVTGLLLKASG--CRLETGERCVIESADGDRIDAQVV 59

Query: 64  RINLDIVYICPVGIGEEISLGDLV---FHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
             N +  ++ P      +  G  V      G  RI     W GR++N LG+ IDG  SLG
Sbjct: 60  GFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRI--GRSWLGRIVNGLGEAIDGRGSLG 117

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            GD  +         + ++ V      G+R I+    L  GQRIG+ AGSG+GKS LL M
Sbjct: 118 -GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRGQRIGLMAGSGVGKSMLLGM 176

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R+   D V++ L+GERGREVREF++       L KSV+V A +DESP++R  A     
Sbjct: 177 ITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLVAAPADESPLMRLKAAELCH 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IA +F   G NVLL++DS+TR+A + REIA + GE P  RGYP SVF  LP+L+E  G 
Sbjct: 237 AIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATRGYPPSVFGMLPQLVETAGN 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E   G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R LAE G YP +D   SVSR
Sbjct: 297 GEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTRELAERGHYPAIDVPRSVSR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +   A+   L   +  +I R E+ RD+  +GGY  G D   D+AV +   I  FL+Q
Sbjct: 356 CMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGADPATDEAVAKAARIDTFLRQ 415

Query: 420 SPSDLSSEDVFQEITKKL 437
              D++  D      K+L
Sbjct: 416 DMLDVARHDATLAALKEL 433


>gi|34558611|gb|AAQ75076.1| antigen P50HH64 [Helicobacter hepaticus]
          Length = 455

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 98/389 (25%), Positives = 162/389 (41%), Gaps = 13/389 (3%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWC 102
              + V     ++   G    +    V +  +G G  I  G  V    +  ++       
Sbjct: 1   MYYEMVEFDTGDT---GIAFNLEESSVGVVVLGSGRTIKEGTSVKRLKKLMKVPVGDAIV 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRVIN LG+PIDG  ++   +    +  K P  M R+ V +  +TG++ ID   P+  GQ
Sbjct: 58  GRVINTLGEPIDGKGAIEANEYRF-VEEKAPGIMARKSVHQPLQTGLKAIDALVPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           R  +      GK+T+      +        I   VG++   V + +           +VV
Sbjct: 117 RELIIGDRQTGKTTVAIDTIINQKGQDVICIYVAVGQKESTVAQVVRKLEEHGAMDYTVV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +  S  ++ +AP T VTI EYF     + L+I D +++ A + RE++      P  
Sbjct: 177 VNAPASFSAAMQFLAPYTGVTIGEYFRDNARHALIIYDDLSKHAVAYREMSLILRRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             +P  VF    RLLER      E   G++TA+  +     +    I  +V SI DG I 
Sbjct: 237 EAFPGDVFYLHSRLLERAAKLNDELGAGSLTALPIIETQAGDVAAYIPTNVISITDGQIF 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L   G  P ++   SVSR+   A     K++  +L   + ++ E +       +  
Sbjct: 297 LETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVAGTLRLDLAQYRELQ---AFSQFAS 353

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +D    K + +   + + LKQ P    S
Sbjct: 354 DLDESSRKQLERGQRMVEILKQPPYSPLS 382


>gi|289805453|ref|ZP_06536082.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 463

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|20146584|gb|AAM12446.1| ATP synthase alpha subunit [Lissocarpa guianensis]
          Length = 399

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V          G  + +  + V I   G    I  
Sbjct: 1   GRMVSVEDGIARVYGLNE-IQAGEMVEFANG---VKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G+    V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQERSTVAQLVQILSRANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HSLIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 MKQVCGSSKLELAQYRE---VAPLAQFGSDLDAATQALLNRGARLTE 399


>gi|323705922|ref|ZP_08117493.1| ATP synthase F1, beta subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534720|gb|EGB24500.1| ATP synthase F1, beta subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 461

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 117/405 (28%), Positives = 189/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           GYI+ +      +    +   + + +    K  + + +V +   D  V    +   + + 
Sbjct: 4   GYITQVIGPVVDIRFDEELPPINNAIRIPFKGDEIIVEVSQHTGDNTVRCVAMSSTDGLK 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G   F  G    +       GR+ N LGK +D    + K D  M I    P    +  V
Sbjct: 64  RGMECFDTGGPISVPVGEGTLGRMFNVLGKTMDELGEV-KADKYMPIHRDAPSFEEQSPV 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +    S+   VGER
Sbjct: 123 TEILETGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIEELIRNIATEHGGYSIFTGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  +   +      + K+  V    +E P  R    LT +T+AEYF  +   +VLL +
Sbjct: 183 TREGNDLWHEMKESGVIDKTAFVFGQMNEPPGARMRVALTGLTMAEYFRDEKHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +    G+IT+V +V V 
Sbjct: 243 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATELGALQERI--TSTRSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSS 375
            D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ +     +E   +   
Sbjct: 301 ADDLTDPAPATTFTHLDATTVLSRSIVEMGIYPAVDPLDSTSRILEPNIVGEEHYTVARR 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ +++E +DI  I G     D      V++   I  FL Q 
Sbjct: 361 VQEILQKYKELQDIIAILGMDELSDED-KLTVYRARKIQRFLSQP 404


>gi|283955636|ref|ZP_06373129.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792861|gb|EFC31637.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 461

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 164/436 (37%), Positives = 240/436 (55%), Gaps = 6/436 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV 62
           NLE L        +NL    G I+ I++    +  L   V  +   V ++ +N + L  V
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++ +
Sbjct: 60  VEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI-E 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 VSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+++
Sbjct: 179 VKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSV 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E
Sbjct: 239 AEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEE 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 299 G-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               SA+ K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P
Sbjct: 358 SDIISAEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E+  ++
Sbjct: 418 EESFEFNQTLELLSQI 433


>gi|89112838|gb|ABD61031.1| ATPase alpha subunit [Cercis canadensis]
          Length = 396

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 19/380 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 2   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 62  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 120

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 121 IDTILNQKQMNSSSTSDSETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 180

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 181 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 240

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L  
Sbjct: 241 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 300

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    
Sbjct: 301 RGIRPAINVGLSVSRVGSAAQLKSMKQVCGSLKLELAQYRE---VAAFAQFGSDLDPATQ 357

Query: 405 KAVHQVPIIYDFLKQSPSDL 424
             +++   + +  KQ   + 
Sbjct: 358 ALLNRGARLTEVPKQPQYEP 377


>gi|87307395|ref|ZP_01089540.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645]
 gi|87290135|gb|EAQ82024.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645]
          Length = 456

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 157/421 (37%), Positives = 241/421 (57%), Gaps = 11/421 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINL 67
           +QL +  S +LV  GG + +I +   T+        +G  V  Q ++   L G+V+    
Sbjct: 6   SQLDQLMSHDLV--GGVVETIGT---TIAVGGFPAPVGSVVEIQRQSGKPLAGEVVGFRG 60

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           ++  + P+     +  G  V      R I       GR+++A G  IDG        +  
Sbjct: 61  ELTLVFPLEQLSGVRQGSSVRLIRTMRSIPVGDSLLGRIVDAHGNCIDGFPH-PALTMRS 119

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +    P A +R R+ + F TG+R ID       GQRIG+FAGSG+GKS  L M A+   
Sbjct: 120 PMDQDPPIATSRPRIHETFSTGVRAIDGMLTCGDGQRIGIFAGSGVGKSVTLGMMAKYAS 179

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            +  +I+L+GERGREV +FI  D   + + +SVV+VATSD+  I+R  A + A +IAEYF
Sbjct: 180 SEVNVIALIGERGREVNDFIERDLGPEGMARSVVIVATSDQPAIMRVQAAMAATSIAEYF 239

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
              G  VL ++DS+TRFA + REI   +GE P  +GY  SVF+ LP+L+ER G S   +G
Sbjct: 240 RESGRRVLFMMDSVTRFAMAQREIGLAAGEPPTTKGYTPSVFAMLPKLVERTGRSA--QG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VLV+GD+ N+P++D+VR +LDGH++L+R++A +G YP +D LAS+SRL +   
Sbjct: 298 SITAFYTVLVEGDDTNEPVSDAVRGLLDGHVILSRAIAAKGHYPAIDILASISRLMNDLV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           S + ++   ++  L+  + E  D+  IG YR G +  +D A+     I  FL+Q+  + S
Sbjct: 358 SEETRRAAQTIRELMSTYRENEDLINIGAYRQGTNPQIDLAIRMRSEIDTFLRQAMEEKS 417

Query: 426 S 426
           S
Sbjct: 418 S 418


>gi|302185559|ref|ZP_07262232.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae
           642]
          Length = 452

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 153/411 (37%), Positives = 225/411 (54%), Gaps = 13/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
           V  G +  +  +      L     +G   V    +S    +   +V+  +   V++ PVG
Sbjct: 26  VVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDDSHHPVEVEAEVMGFSGGKVFLMPVG 83

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               I+ G  V      GR          GRV++  G+P+DG   + K +  + +     
Sbjct: 84  SVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDGRSPI-KAEDWVPMDGPTI 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ 
Sbjct: 141 NPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVG 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NV
Sbjct: 201 LIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +
Sbjct: 261 LLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYT 320

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S +    
Sbjct: 321 VLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMAR 380

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                 L  R+++TRD+  +G Y  G D   D A+   P++  + +Q   D
Sbjct: 381 AQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRD 431


>gi|297569158|ref|YP_003690502.1| flagellar protein export ATPase FliI [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925073|gb|ADH85883.1| flagellar protein export ATPase FliI [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 438

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 152/428 (35%), Positives = 239/428 (55%), Gaps = 9/428 (2%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
               +L   GG +S +  +          V  + +  V +G+      +V+      V +
Sbjct: 12  ARETSLFTVGGRVSQVIGMVIESEGPGIPVGSICEIDVFRGQAK-VPAEVVGFREGKVLL 70

Query: 73  CPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P+G    +  G  +    G  R+  S    GR+I+ LG+P+DG+  L  G+    + ++
Sbjct: 71  MPLGEMRGVEPGGAIRLVEGAARVPVSQDLLGRIIDGLGQPMDGNGPL-PGESFYPLYAE 129

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               M R+R+      G+R I+    L  GQRIG+ AGSG+GKSTL+ M AR    D  +
Sbjct: 130 PLNPMTRERITDPVDVGVRAINGLLTLGKGQRIGIMAGSGVGKSTLMGMIARHTAADISV 189

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGRE+++FI  D   + L +SVVVVATSD+ P++R      A+ +AEYF   G 
Sbjct: 190 IALIGERGRELKDFIERDLGPEGLARSVVVVATSDQPPLVRMRGAYLAMAVAEYFRDLGR 249

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +V+L++DS+TR+A S RE+    GE P +RGY  SVF +LP+LLER G  +  KG+IT +
Sbjct: 250 DVVLMMDSVTRYAMSGREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSITGI 308

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GD+ N+PIAD+VRSI+DGHIVL+R LA +G YP ++ + SVSR        ++ 
Sbjct: 309 FTVLVEGDDMNEPIADAVRSIVDGHIVLSRDLASQGHYPAIEVMGSVSRCMSDVVPEEQV 368

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +       ++  +  + D+  IG Y  G +  +D A+  +  +  +L+Q+ +D      F
Sbjct: 369 RAAHRFLEVLALYRRSEDLINIGAYAKGSNPKIDGAIAMIDKLNGYLRQAVNDRV---TF 425

Query: 431 QEITKKLQ 438
            +   +LQ
Sbjct: 426 SDSAAQLQ 433


>gi|71906409|ref|YP_283996.1| ATPase FliI/YscN [Dechloromonas aromatica RCB]
 gi|71846030|gb|AAZ45526.1| ATPase FliI/YscN [Dechloromonas aromatica RCB]
          Length = 472

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 151/437 (34%), Positives = 229/437 (52%), Gaps = 26/437 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++ I  +      L   + LG    ++         +V+    + +Y+ P      ++
Sbjct: 38  GRLTRINGLVMEAAGL--KLPLGSTCKIYPSSGIPIEAEVVGFAGEKLYLMPSDDVYGLA 95

Query: 83  LGDLVFHWGRFRI---------------------SPSACWCGRVINALGKPIDGDDSLGK 121
            G  V       +                            GRV++ +G+P+D    L  
Sbjct: 96  PGSKVVAVESPNMLPKLGGPPPFRRRAIDRAKQGPVGEELLGRVLDGVGRPLDNKGPLIA 155

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            + +  + S+    M+R  + +    GIR I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 156 AE-TRPLQSRPINPMSRAAIHQPLDVGIRAINALLTVGRGQRMGLFAGSGVGKSVLLGMM 214

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    + +++ L+GERGREV+EFI +    + +++SVVV A +D  P++R      A T
Sbjct: 215 ARYTEAEVIVVGLIGERGREVKEFIEQILGEEGMRRSVVVAAPADTGPLMRLQGAAYATT 274

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G +VLLI+DS+TR+A + REIA   GE P  RGYP SVF+ LP+L+ER G  
Sbjct: 275 IAEYFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATRGYPPSVFARLPQLVERAGNG 334

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           ++  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LA+ G YP +D   S+SR 
Sbjct: 335 QEGGGSITAFYTVLAEGDDQQDPIADSARAILDGHIVLSRTLADAGHYPAIDIEQSISRA 394

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 A     +     L  R++ +RD+  +G Y PG D +LD+A+   P +  FL+Q 
Sbjct: 395 MVNLIDAPHLDQIRKFKVLFARYQRSRDLISVGAYAPGSDPVLDQAISLYPRMESFLQQQ 454

Query: 421 PSDLSSEDVFQEITKKL 437
             + S      E  K L
Sbjct: 455 LIEQSDFPSSLEALKTL 471


>gi|57168630|ref|ZP_00367762.1| flagellum-specific ATP synthase [Campylobacter coli RM2228]
 gi|305432742|ref|ZP_07401902.1| flagellar protein export ATPase FliI [Campylobacter coli JV20]
 gi|57019911|gb|EAL56591.1| flagellum-specific ATP synthase [Campylobacter coli RM2228]
 gi|304444251|gb|EFM36904.1| flagellar protein export ATPase FliI [Campylobacter coli JV20]
          Length = 461

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 167/438 (38%), Positives = 240/438 (54%), Gaps = 13/438 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNLG 60
           NLE L        +NL    G I+ I++    +  L   V  GD    V ++ +N + L 
Sbjct: 2   NLEKLRSKLGK--ENLSAVFGEITKISATSIEIRGLKTGV--GDIIKLVSNENENLNTLA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++
Sbjct: 58  MVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ 
Sbjct: 118 -EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+
Sbjct: 177 MIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAM 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           ++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G 
Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGK 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E  KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR
Sbjct: 297 EEG-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q
Sbjct: 356 VMGDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAIAKKEFMQKFLGQ 415

Query: 420 SPSDLSSEDVFQEITKKL 437
           +P +      F+E  + L
Sbjct: 416 NPEESFE---FEETIRLL 430


>gi|330976000|gb|EGH76066.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 452

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 157/450 (34%), Positives = 240/450 (53%), Gaps = 18/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +  + A+    Y++++      V  G +  +  +      L     +G   V    +
Sbjct: 1   MRLDRTSFAKRLGSYAESISLPVQPVVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDD 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINA 108
           S    +   +V+  +   V++ PVG    I+ G  V      GR          GRV++ 
Sbjct: 59  SHHPVEVEAEVMGFSGGKVFLMPVGSVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDG 116

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
            G+P+DG   + K +  + +       + R  + +    GIR I+    +  GQR+G+FA
Sbjct: 117 AGRPLDGRSPI-KAEDWVPMDGPTINPLKRDPISRPLDVGIRCINGLLTVGRGQRLGLFA 175

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G+GKS LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++
Sbjct: 176 GTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDA 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R  A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF
Sbjct: 236 PLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVF 295

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP+L+ER G +E   G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG 
Sbjct: 296 ARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGH 355

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  AS+SR+     S +          L  R+++TRD+  +G Y  G D   D A+
Sbjct: 356 YPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAI 415

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              P++  + +Q   +  S +   E    +
Sbjct: 416 ALHPVLVRYQRQGLRENESIEGSSEALASI 445


>gi|153951633|ref|YP_001397442.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939079|gb|ABS43820.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 461

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 164/438 (37%), Positives = 240/438 (54%), Gaps = 10/438 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNLG 60
           NLE L        +NL    G I+ I++    +  L     +GD    V ++ +N + L 
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGL--KTGIGDIVKLVSNENENLNTLA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++
Sbjct: 58  MVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +    M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ 
Sbjct: 118 -EVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M  ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+
Sbjct: 177 MIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAM 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           ++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G 
Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGK 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E  KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR
Sbjct: 297 EEG-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q
Sbjct: 356 VMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQ 415

Query: 420 SPSDLSSEDVFQEITKKL 437
           +P +    +   E+  ++
Sbjct: 416 NPEESFEFNQTLELLSQI 433


>gi|124801366|ref|XP_001349675.1| ATP synthase F1, alpha subunit, putative [Plasmodium falciparum
           3D7]
 gi|3845279|gb|AAC71948.1| ATP synthase F1, alpha subunit, putative [Plasmodium falciparum
           3D7]
          Length = 551

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/435 (24%), Positives = 183/435 (42%), Gaps = 24/435 (5%)

Query: 6   ETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG---KNSDNLGQ 61
           + L +  E ++ K    + GY+ S+         L+  V   + V       K S   G 
Sbjct: 43  KILEKKFESFNFKTSSNEVGYVLSVGDGICRAYGLN-NVKSSELVEIHNEDDKGSVTYGM 101

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              +  D V I   G    I  GD++    R           GRV++ALG  IDG+ ++ 
Sbjct: 102 ATNLEYDNVGIVIFGNDRNIKEGDVIKRTNRIIDVNVGYELLGRVVDALGNCIDGEKNVV 161

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +   +I  K P  + R+ V +   TGI+ ID   P+  GQR  +      GK+ +   
Sbjct: 162 TKE-RRKIEIKAPGIIARKSVNESIITGIKCIDSLVPIGRGQRELIIGDRQTGKTAIAID 220

Query: 181 FARSDC-----------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
                                I   +G++   + + +      D LK +++V +++ ++ 
Sbjct: 221 AIIHQKNINDNVLNNNEKVYCIYVAIGQKKSNIAKLVNLLKKYDALKYTIIVNSSASDAS 280

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP T   +AE+F   G + L+I D +++ A + R+++      P    YP  +F 
Sbjct: 281 PLQFLAPYTGCAMAEFFRDNGKHALIIFDDLSKQAVAYRQLSLLLRRPPGREAYPGDIFY 340

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              +LLER          G++TA+  +    ++ +  I  +V SI DG I L   L  +G
Sbjct: 341 IHSKLLERSSKLNDNLKGGSLTALPIIETLNNDVSAYIPTNVISITDGQIFLESELFYKG 400

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     KKL SS+   + +F E   I     +   +D+   K 
Sbjct: 401 IIPAINVGLSVSRIGSSAQYNCMKKLASSMKLELAQFRE---IVAFSQFGSDLDVSTKKL 457

Query: 407 VHQVPIIYDFLKQSP 421
           + +  I+ + LKQ  
Sbjct: 458 IEKGKILTEILKQKQ 472


>gi|18146849|dbj|BAB82482.1| F0F1-ATPase subunit alpha [Colwellia maris]
          Length = 513

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L ++  +           G I S+T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKNRIEQFNVVSEARNEGTIVSVTDGIIRINGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + ++ D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFAIALNLDRDSVGAVVMGPYADLAEGQKVKGTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGPVD-NDGFSPVEVVAPGVIERKSVDQPVQTGIKSIDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           S +      +  D   K +   +G++   V   + +         ++VVVA++ E+  L+
Sbjct: 176 SAIAVDAIINQKDTGIKCVYVAIGQKASTVANLVRNLEEHGALSNTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEAYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+   SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 ESNLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYAEL---AAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +     + + +KQ+     S
Sbjct: 413 LDDATRAQLEHGQRVTELMKQNQYSPLS 440


>gi|189017752|gb|ACD71545.1| F1-ATPase alpha subunit [Thismia panamensis]
          Length = 402

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 93/394 (23%), Positives = 166/394 (42%), Gaps = 21/394 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +   +G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEF--ASGLIVGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 66

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 67  VVDALGVPIDGRGALGDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 125

Query: 165 GVFAGSGIGK-----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK      T+L+    +D           +   +G++   V + ++     +
Sbjct: 126 LIIGDRQTGKTAIAIDTILNQKQMNDKGKPESETLYCVYVAIGQKRSTVAQLVQILSEAH 185

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 186 ALSYSMIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 245

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +  +G+ TA+  +     + +  I  +V  
Sbjct: 246 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGEGSSTALPVIETQAGDVSAYIPTNVIP 305

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 306 ITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 362

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               +   +D      +++   + +  KQ   + 
Sbjct: 363 AFAQFGSDLDAATQALLNRGDRLTEVPKQPQYEP 396


>gi|20146546|gb|AAM12427.1| ATP synthase alpha subunit [Cornus suecica]
          Length = 395

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 165/403 (40%), Gaps = 23/403 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIMDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    +++V AT+ +   L+ MAP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQTLSEANAMEYTILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKIMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             S    + ++ E   +  +  +   +D      +H+   + +
Sbjct: 356 CGSSKLELAQYRE---VAALAQFGSDLDAATQALLHRGARLTE 395


>gi|161502906|ref|YP_001570018.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864253|gb|ABX20876.1| hypothetical protein SARI_00965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 456

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 235/428 (54%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + ++     +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 83  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTTE-TGA 141

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 142 LITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRA 201

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 202 DVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 261

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 262 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      +
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALIT 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 382 EQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERAD 441

Query: 427 -EDVFQEI 433
            E+  Q +
Sbjct: 442 WENSLQAL 449


>gi|157373215|ref|YP_001471815.1| FliI/YscN family ATPase [Shewanella sediminis HAW-EB3]
 gi|157315589|gb|ABV34687.1| ATPase, FliI/YscN family [Shewanella sediminis HAW-EB3]
          Length = 447

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 144/442 (32%), Positives = 243/442 (54%), Gaps = 7/442 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           +Q +  T+ +  +     +    G ++ +  +      +   + +GD    + ++   + 
Sbjct: 5   LQPSENTITEAPDWPRVPVAQVYGRLTRVNGLLL--EAVGCQLGMGDRCHIECRDGRLIE 62

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N + + + P+     +  G  V     + +I       GRV++ LG+P+D    
Sbjct: 63  AEVVGFNRETLCLMPIEHTSGLMPGSRVMPLAEQVKIPVGTSLLGRVLDGLGQPLDALGP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L K   S+ + +     + R+ + +    GIR I+   P+  GQR+G+FAGSG+GKS LL
Sbjct: 123 L-KNLQSVPLSNNTTNPLLRKPIREPLDVGIRAINALLPIGRGQRLGLFAGSGVGKSVLL 181

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M  R    D V++ L+GERGREVREFIE+    +  +++VV+ A +D +P++R  A   
Sbjct: 182 GMMTRFTEADVVVVGLIGERGREVREFIEESLGEEGRERAVVIAAPADTTPLMRMRAMRL 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +A  F  +G  VLL++DS+TR+A + REIA + GE P  +GYP S F++LP L+E  
Sbjct: 242 CHHVAAAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPSLVELA 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  +   G +TA  +VL +GD+  DPIAD+ R+ILDGH+VL+R LAE+G +P +D  ASV
Sbjct: 302 GNGQDPVGTLTAFYTVLTEGDDQQDPIADAARAILDGHLVLSRKLAEQGHFPAIDISASV 361

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SRLA +     +        HL  R+ E R++  +GGY+ G D  +D AV   P++  FL
Sbjct: 362 SRLATQVADQTQLSQGHHFRHLNSRYNEVRELLPLGGYQAGHDPQMDLAVRSYPMMAQFL 421

Query: 418 KQSPSD-LSSEDVFQEITKKLQ 438
           +Q+  +    +   ++++  ++
Sbjct: 422 QQNTEEKFDRQQSLEQLSDLVE 443


>gi|315932002|gb|EFV10955.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 461

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 163/436 (37%), Positives = 238/436 (54%), Gaps = 6/436 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV 62
           NLE L        +NL    G I+ I++    +  L   V  +   V ++ +N + L  V
Sbjct: 2   NLEKLRSKLGK--ENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMV 59

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + I     Y+ P    E   +GD  F      +I  S    GRV++   +P DG  ++ +
Sbjct: 60  VEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAI-E 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
               M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 VSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMI 178

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            ++      +++L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+++
Sbjct: 179 VKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSV 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  E
Sbjct: 239 AEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEE 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+ 
Sbjct: 299 G-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVM 357

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+P
Sbjct: 358 SDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLGQNP 417

Query: 422 SDLSSEDVFQEITKKL 437
            +    +   E   ++
Sbjct: 418 EESFEFNQTLEFLSQI 433


>gi|91226236|ref|ZP_01261076.1| F0F1 ATP synthase subunit alpha [Vibrio alginolyticus 12G01]
 gi|91189247|gb|EAS75526.1| F0F1 ATP synthase subunit alpha [Vibrio alginolyticus 12G01]
          Length = 513

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 105/456 (23%), Positives = 191/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++  V       G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFEVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  ++  +    P  ++R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPI-EAKMTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D     I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 413 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|20146604|gb|AAM12456.1| ATP synthase alpha subunit [Polemonium caeruleum]
          Length = 390

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 93/398 (23%), Positives = 165/398 (41%), Gaps = 21/398 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGL-KDIQAGEMVSFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGRALLGRVVDALGLPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGR 200
           + +D   P+  GQR  +      GK+ +      +               +   +G++  
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRSESERLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     +  + S++V ATS +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILSEAHALEYSILVAATSSDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL 
Sbjct: 296 GDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             + ++ E   +     +   +D      +++   + +
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLTE 390


>gi|27461607|gb|AAM95220.1| ATPase F1 alpha subunit [Elegia fenestrata]
          Length = 390

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 91/389 (23%), Positives = 161/389 (41%), Gaps = 22/389 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRGTNESDTLYCVYVAIGQKRSTVAQLVQILSEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 305 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
               +   +D      +++   + +  KQ
Sbjct: 362 AFAQFGSDLDAATQALLNRGARLTEVPKQ 390


>gi|119953087|ref|YP_945296.1| flagellum-specific ATP synthase [Borrelia turicatae 91E135]
 gi|119861858|gb|AAX17626.1| flagellum-specific ATP synthase [Borrelia turicatae 91E135]
          Length = 436

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 253/441 (57%), Gaps = 13/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           M    E  +++ +D     ++  G +  I  +   V  L     +GD   + Q       
Sbjct: 2   MDIFFEGYSKMLDDVEPISLI--GKVRKIKGLL--VESLGPKCGIGDLCLIEQRSGKKIY 57

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+ +N   V +      + I +GD V   G+  +I+ S    GRVI++LG+PID    
Sbjct: 58  AEVLGLNGSFVNLMAYEGFDGIEIGDQVCSLGKKLQINLSDELLGRVIDSLGRPIDNKGQ 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               +   E+       ++R    +   TG++V+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 118 FF-CNYYKELSFSNINPLSRGVFSEQIVTGVKVLDGFLPVAKGQRVGIFSGAGVGKSTLL 176

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  D   +  K+SV++V+TSD SPI R     T
Sbjct: 177 GMIAKNSKADVNVIAFIGERGRELNEFIKYDLGEECFKRSVLIVSTSDASPIARYKGAYT 236

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF   G +V+L+ DSITRFA++ REI+ + GE P  +GYP SVF E+P LLER 
Sbjct: 237 ATLIAEYFRDCGMDVMLLFDSITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERS 296

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G + K  G+IT   +VLV+GD+  +PIAD+++++LDGHI+L+R L++ G YP V+ L+S 
Sbjct: 297 GLNSK--GSITGFYTVLVEGDDFTEPIADNMKAVLDGHIILDRDLSDRGIYPSVNILSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  + +++KL+S + +L+  ++   D+   G Y  G +  +D AV + P I DFL
Sbjct: 355 SRSLHRIVNFEKQKLISKIRNLLSIYKSYEDLIKTGIYIKGSNKEVDLAVAKYPKIIDFL 414

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
            Q   +   E  F+ +  +L+
Sbjct: 415 SQGIQE---EFDFENLDSELR 432


>gi|111225282|ref|YP_716076.1| F0F1 ATP synthase subunit alpha [Frankia alni ACN14a]
 gi|123142641|sp|Q0RDB2|ATPA_FRAAA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|111152814|emb|CAJ64558.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Frankia alni
           ACN14a]
          Length = 552

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 93/417 (22%), Positives = 168/417 (40%), Gaps = 22/417 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +         V  L  +    + +   G     LG  + + +  +    +G  E I
Sbjct: 31  EVGRVVVTGDGIARVEGL-PHTMTNELLEFSGG---VLGLALNLEIGEIGTVILGEAEHI 86

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV++ LG+PIDG   + + + +  +  + P  + RQ 
Sbjct: 87  EEGQEVRRTGEILAVPVGDGFLGRVVDPLGRPIDGLGEI-QAEGTRALELQAPTVVQRQP 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++  +TGI+ ID  T +  GQR  +      GK      T+++        D     K 
Sbjct: 146 VKEPLQTGIKAIDAMTAIGRGQRQLIIGDRQTGKTTVAIDTIINQRDNWASGDPSKQVKC 205

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   +RE +           + VV A +DE    + +AP     IA+++   G
Sbjct: 206 VYVAIGQKKSTIREVVNTLEEAGALAYTTVVAAPADEPAGFKYIAPYAGSAIAQHWMYNG 265

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L++ D +++ A + R I+      P    YP  VF    RLLER      E   G++
Sbjct: 266 QHALIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSL 325

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A + 
Sbjct: 326 TGLPIIETKASDISAYIPTNVISITDGQIFLESDLFNQGVRPAINVGTSVSRVGGSAQTK 385

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             K +   L   + ++ E         +   +D      + +   + + LKQ  +  
Sbjct: 386 AMKSVAGRLRLDLAQYRELE---AFSAFGSDLDKASRDQLARGARLVELLKQPQNQP 439


>gi|148359301|ref|YP_001250508.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Corby]
 gi|296107348|ref|YP_003619048.1| flagellum-specific ATP synthase [Legionella pneumophila 2300/99
           Alcoy]
 gi|1938361|gb|AAB52239.1| nucleotide binding protein FliI [Legionella pneumophila]
 gi|148281074|gb|ABQ55162.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Corby]
 gi|295649249|gb|ADG25096.1| flagellum-specific ATP synthase [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610456|emb|CBX00027.1| flagellum-specific ATP synthase FliI [Legionella pneumophila 130b]
          Length = 449

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 163/438 (37%), Positives = 245/438 (55%), Gaps = 4/438 (0%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           Q  L  +     +   + ++  G IS    +       +Q V     V           +
Sbjct: 5   QTQLHKILSGTRNKHHSGLLHCGRISRAIGLTIEAKGFNQPVGARCLVKI-NDEHSVQAE 63

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG 120
           V+  + + VY+  +G  + I+ G  +   GR  ++S      GR++N  G  ID D   G
Sbjct: 64  VVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPPG 122

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +   +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL M
Sbjct: 123 EMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLGM 182

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
             R    D V++ L+GERGREV+EFIE  LG + L+++VVV A +DESP++R      A 
Sbjct: 183 MTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVAT 242

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G 
Sbjct: 243 SIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGN 302

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+SR
Sbjct: 303 GTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASISR 362

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L Q
Sbjct: 363 VMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLAQ 422

Query: 420 SPSDLSSEDVFQEITKKL 437
              +  S D       KL
Sbjct: 423 GMDEQVSYDESLSSLTKL 440


>gi|71736661|ref|YP_275538.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557214|gb|AAZ36425.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320325117|gb|EFW81186.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329376|gb|EFW85369.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330986492|gb|EGH84595.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011067|gb|EGH91123.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 452

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 153/411 (37%), Positives = 225/411 (54%), Gaps = 13/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
           V  G +  +  +      L     +G   V    +S    +   +V+  +   V++ PVG
Sbjct: 26  VVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDDSHHPVEVEAEVMGFSGGKVFLMPVG 83

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               I+ G  V      GR          GRV++  G+P+DG   + K +  + +     
Sbjct: 84  SVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDGRSPI-KAEDWVPMDGPTI 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ 
Sbjct: 141 NPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVG 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NV
Sbjct: 201 LIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +
Sbjct: 261 LLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYT 320

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S +    
Sbjct: 321 VLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMAR 380

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                 L  R+++TRD+  +G Y  G D   D A+   P++  + +Q   D
Sbjct: 381 AQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRD 431


>gi|213052668|ref|ZP_03345546.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 513

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  + V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERNSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|311085756|gb|ADP65838.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 512

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 112/448 (25%), Positives = 200/448 (44%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   +++L ++      V       G I S++     +  LS  V LG+ ++     
Sbjct: 1   MRLNSTEISKLIKERIAQFEVFNQSYNEGSIISVSDGIIKINGLS-NVMLGEMILLPNNE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + I  D V    +G    IS G  V   G+   +     + GRV+NALG PID
Sbjct: 60  ---YAIALNIERDTVGAVVMGPYIHISEGAKVRCTGKILEVPVGDNFLGRVVNALGFPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G DS+ + D    + +  P  ++R+ V +  +TG +VID   P+  GQR  +      GK
Sbjct: 117 GKDSI-QHDGFFPVEADAPGVIDRKSVNQPIQTGYKVIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++  +     K I   +G++   +   ++    +N    +++VVA++ E+  L+
Sbjct: 176 TALAIDTIINQKQSGIKCIYVAIGQKLSTIINVVKKLEENNALFNTIIVVASASEAASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   +AE+F +KG++ L+I D +++ A + R+I+      P    +P  +F    
Sbjct: 236 YLAPYSGCAMAEFFRNKGEDSLIIYDDLSKHAVAYRQISLLLRRPPGREAFPGDIFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G+ITA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSMEYVQKITKNKITGKTGSITALPIIETQSGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL S +   + ++   +++     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGSAAQTTIIKKLSSGIRTALAQY---QELAAFSQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K ++    I + LKQ      S
Sbjct: 413 LDDTTRKQLNHGQKITELLKQKQYSPIS 440


>gi|170737022|ref|YP_001778282.1| FliI/YscN family ATPase [Burkholderia cenocepacia MC0-3]
 gi|169819210|gb|ACA93792.1| ATPase, FliI/YscN family [Burkholderia cenocepacia MC0-3]
          Length = 435

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 162/425 (38%), Positives = 240/425 (56%), Gaps = 11/425 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G +S+++ +   VT  +     G     +  ++D L  +V+     + Y+ P  
Sbjct: 15  PVARPVGRLSAVSGLLLEVTGYAFET--GQLARIETASNDWLDARVVGFREGVSYLMPFR 72

Query: 77  IGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  VF   G   +S  A W GR+++ LG+PID    L  GD  +++       
Sbjct: 73  PAEGLAAGARVFGDDGARMLSIGAAWRGRIVDGLGEPIDDRGPLV-GDAVLDLAPPRVNP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + +Q VE     G+R ID    L  GQR+G+FAGSG+GKS LL M AR    D V++ ++
Sbjct: 132 LRKQPVEGVMDVGVRAIDGMLTLGRGQRVGLFAGSGVGKSVLLGMIARQTAADVVVVGMI 191

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFI      + L K++VVVA +DESP++R MA      IA +F   G++VLL
Sbjct: 192 GERGREVREFIEHSLGPEGLSKAIVVVAPADESPLMRLMATELCHAIATHFRDAGNDVLL 251

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA   GE P  RGYP SVF  LPRL+ER G  E   G+++A+ +VL
Sbjct: 252 MIDSLTRYAMAQREIALALGEPPATRGYPPSVFGMLPRLVERAGNGEGV-GSMSAIYTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DP+ D+ R+ILDGHI+L+R LA +G YP +D L SVSR        ++   V 
Sbjct: 311 AEGDDEQDPVVDTARAILDGHIMLSRDLASQGHYPAIDVLRSVSRCMSLVAPREQIDAVH 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL----SSEDVF 430
            +  ++ R+   RD+  +GGY  G DL+ D AV     I  FL Q+  ++    ++ D+ 
Sbjct: 371 KVKQMMSRYANVRDLIPLGGYVAGADLVTDHAVKMHDRIEAFLCQAQDEVAPRQATLDIL 430

Query: 431 QEITK 435
            EI  
Sbjct: 431 TEIAA 435


>gi|254821307|ref|ZP_05226308.1| F0F1 ATP synthase subunit alpha [Mycobacterium intracellulare ATCC
           13950]
          Length = 551

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/434 (22%), Positives = 176/434 (40%), Gaps = 23/434 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +    ++ +   +  G +         V  L   V   + +   G     LG  + 
Sbjct: 13  SAIEEYVGSFTSDTAREEVGTVVDAGDGIAHVEGL-PSVMTQELLEFPGG---VLGVALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V    +G  E+I  G  V   G    +     + GRV+N LG+PIDG   + + D
Sbjct: 69  LDEHNVGAVILGDFEKIEEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPIDGQGDI-ETD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
           +   +  + P  + RQ V++  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 128 VRRALEIQAPSVVQRQSVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTIL 187

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +     +  D+      +   +G++G  +               + +V A + +S   + 
Sbjct: 188 NQRQNWESGDERKQVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   IA+++   G +VL++ D +++ A + R I+      P    YP  VF    R
Sbjct: 248 LAPYTGSAIAQHWMYDGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG   L   L  +G  P 
Sbjct: 308 LLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLESDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + +F E         +   +D      + + 
Sbjct: 368 INVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQFRELESFAA---FASDLDATSKAQLDRG 424

Query: 411 PIIYDFLKQSPSDL 424
             + + LKQ     
Sbjct: 425 ARLVELLKQPQYQP 438


>gi|90409083|ref|ZP_01217207.1| ATP synthase subunit A [Psychromonas sp. CNPT3]
 gi|90309810|gb|EAS37971.1| ATP synthase subunit A [Psychromonas sp. CNPT3]
          Length = 513

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/443 (22%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I S++     +  L+     G+ +     +
Sbjct: 1   MQLNSTEISDLIKQRIEKFEAVSETRNEGTIVSVSDGIIRINGLAD-CMQGEMIELPNGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G  +++  G+ V   GR   +       GRV+N LG+PID
Sbjct: 60  ---FAMALNLERDSVGAVVMGPYKDLREGEKVKSTGRILEVPVGKGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + ID   P+  GQR  +     +GK
Sbjct: 117 GKGPI-EHDGYSPVEVIAPGVIDRKSVDQPVQTGWKSIDSMVPIGRGQRELIIGDRQVGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     +   +G++   +   +           ++VVVA++ E+  L+
Sbjct: 176 TAIAIDAIINQKNTGLYSVYVAIGQKSSTIANVVRKLEEHGALANTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAAYVEKFTKGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A     KKL   +   + ++ E   +     +   
Sbjct: 356 TTELFNSGIRPAVDPGISVSRVGGAAQCKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D I  + +     + + +KQ  
Sbjct: 413 LDDITRRQLDHGKKVTELMKQKQ 435


>gi|189017730|gb|ACD71534.1| F1-ATPase alpha subunit [Lophiola aurea]
          Length = 400

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 304 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSLKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 391


>gi|6561626|gb|AAF16970.1|AF197638_1 ATPase alpha subunit [Nuphar sp. Qiu M114]
          Length = 410

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 171/412 (41%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVIISLV 195
           TG++ +D   P+  GQR  +      GK      T+L+    +            +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSNGISESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 404


>gi|317502198|ref|ZP_07960372.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088763|ref|ZP_08337673.1| ATP synthase F1 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896407|gb|EFV18504.1| ATP synthase subunit alpha [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407286|gb|EGG86789.1| ATP synthase F1 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 501

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 105/426 (24%), Positives = 185/426 (43%), Gaps = 20/426 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +++ +E    +++D       + G + ++     ++  +  +   G+ V  +       G
Sbjct: 13  LKEEIENFDMMSKD------SEVGTVITVGDGIASIYGI-DHAMYGEIVTFENG---LKG 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            V  I  + +     G    IS G  V   G R  +     + GRV+NALG+PIDG  S+
Sbjct: 63  MVQDIRRNEIGCILFGSDTRISEGTKVTRTGKRAGVPVGDAYIGRVVNALGEPIDGKGSI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
            + D    I  + P  ++R+ V    +TGI  ID   P+  GQR  +      GK+   L
Sbjct: 123 -EADGYRPIEQEAPGIVDRKSVSVPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIAL 181

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D     +   +G++   V + +     +     ++VV +T+ +   L+ +AP 
Sbjct: 182 DTILNQKDKDVICVYVAIGQKASTVAKVVNTLKTNGALDYTIVVSSTASDCAPLQYIAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER
Sbjct: 242 AGTAMAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLER 301

Query: 297 IGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+  
Sbjct: 302 SSRLSDENGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESGLFAAGMRPAVNVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK   S+   + ++ E     +   +   +D    + +     + 
Sbjct: 362 LSVSRVGGAAQTKAMKKASGSIRIDLAQYREME---VFTQFSSDLDPATKEQLEYGSGLM 418

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 419 ELLKQP 424


>gi|34539451|gb|AAQ74609.1| F1-ATPase alpha subunit [Tacca parkeri]
          Length = 415

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 164/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQIHSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     +  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEAHALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|34539295|gb|AAQ74531.1| F1-ATPase alpha subunit [Eupomatia laurina]
          Length = 416

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 91/411 (22%), Positives = 168/411 (40%), Gaps = 23/411 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 403


>gi|220927728|ref|YP_002504637.1| F0F1 ATP synthase subunit alpha [Clostridium cellulolyticum H10]
 gi|219998056|gb|ACL74657.1| ATP synthase F1, alpha subunit [Clostridium cellulolyticum H10]
          Length = 505

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 16/425 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   +     GY+         +  L +    G+ +  +    +  G  + 
Sbjct: 13  SIIKQQIENYDTAVKTDDVGYVLQSGDNIARIYGL-KSCMSGELLQFEN---NVFGMALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  G  V   G+  ++       GRV++ LGKP+DG   +   +
Sbjct: 69  LEEDNVGCVVLGDDRGIKEGSTVKRTGKTVQVPVGQSLVGRVVSPLGKPLDGKGDI-AVE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +    P  ++R+ V K  +TGI  +D   P+  GQR  +      GK+ +      
Sbjct: 128 EYRPVDFTAPGVVDRKSVNKPLQTGIMALDALIPIGRGQRELIIGDRQTGKTAIAVDTII 187

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   +   +        ++ S+VV +T+ +   ++ +AP     
Sbjct: 188 NQKGKDVICVYVAIGQKASTITGIVNTLEKFGAMEYSIVVSSTASDPSSVQYLAPYAGCA 247

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AE F      +VL+I D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 248 MAEDFMYRYHKDVLIIYDDLSKHAVAYRAMSLLLKRPPGREAYPGDVFYLHSRLLERAAK 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SV
Sbjct: 308 LSDELGGGSITALPIIETLAGDVSAYIPTNVISITDGQIYLESELFHSGQRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     +K+   L   + ++ E         +   +D      + Q   + + L
Sbjct: 368 SRVGGSAQIKAMRKIAGPLRINLAQYRELE---AFAQFGSDLDKSTRDKLTQGERLVETL 424

Query: 418 KQSPS 422
           KQ  +
Sbjct: 425 KQPLN 429


>gi|218778525|ref|YP_002429843.1| ATPase FliI/YscN [Desulfatibacillum alkenivorans AK-01]
 gi|218759909|gb|ACL02375.1| ATPase FliI/YscN [Desulfatibacillum alkenivorans AK-01]
          Length = 442

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 151/422 (35%), Positives = 240/422 (56%), Gaps = 8/422 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V+  G +  +  +   V      + +G    +   +      +V+      + + P G  
Sbjct: 16  VLPEGKVDQVVGLI--VEGYGPQMSVGAVCDLVTTQGRRIPAEVVGFKEKRMLLMPYGEM 73

Query: 79  EEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + I LG  +V    +        + GRVI+ LG+P+D    +   D+   + + V  A++
Sbjct: 74  QGIQLGCRIVPRQQQPLAPVGDAYLGRVIDGLGQPMDDKGPIAATDM-YPLYADVVNALH 132

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ V +    G+RVI+ F  +  GQR+ + AGSG+GKS L+ M +R    D  I++L+GE
Sbjct: 133 RRSVNQVSDVGVRVINSFITVGQGQRVAIMAGSGVGKSVLMGMISRHMASDVCIVALIGE 192

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV++F+++ LG D + +S+VV ATSD SP++R      A T+AEYF  +G NV+L++
Sbjct: 193 RGREVKDFVDEILGPDGMGRSIVVAATSDTSPLVRMRGAYLATTLAEYFRDQGKNVILMM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA S R++   +GE P  +GY  S F +LP+LLER G  +  KG+IT + +VLV+
Sbjct: 253 DSVTRFAMSSRDVGLAAGEPPTVKGYTPSFFVKLPKLLERAGSVQG-KGSITGIYTVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ NDP+ D+VRSI+DGHIVL+R LA +G YP VD LASVSR+     S +  ++    
Sbjct: 312 GDDMNDPVGDAVRSIVDGHIVLSRKLANQGHYPAVDVLASVSRVMRATVSGEHTRMAQRF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435
             ++  ++   D+  IG Y  G D  +D A   +  +  FL+Q   + +S E+  Q++T 
Sbjct: 372 REVLAAYQNVEDLISIGAYVDGSDPDVDYAKSMIGKMKQFLRQDMMEGVSYEECVQQLTA 431

Query: 436 KL 437
             
Sbjct: 432 LF 433


>gi|52841984|ref|YP_095783.1| flagellum-specific ATP synthase FliI [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629095|gb|AAU27836.1| nucleotide binding protein FliI [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 450

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 163/438 (37%), Positives = 245/438 (55%), Gaps = 4/438 (0%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           Q  L  +     +   + ++  G IS    +       +Q V     V           +
Sbjct: 6   QTQLHKILSGTRNKHHSGLLHCGRISRAIGLTIEAKGFNQPVGARCLVKI-NDEHSVQAE 64

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG 120
           V+  + + VY+  +G  + I+ G  +   GR  ++S      GR++N  G  ID D   G
Sbjct: 65  VVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPPG 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +   +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL M
Sbjct: 124 EMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLGM 183

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
             R    D V++ L+GERGREV+EFIE  LG + L+++VVV A +DESP++R      A 
Sbjct: 184 MTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVAT 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G 
Sbjct: 244 SIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGN 303

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+SR
Sbjct: 304 GTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASISR 363

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L Q
Sbjct: 364 VMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLAQ 423

Query: 420 SPSDLSSEDVFQEITKKL 437
              +  S D       KL
Sbjct: 424 GMDEQVSYDESLSSLTKL 441


>gi|78067885|ref|YP_370654.1| ATPase FliI/YscN [Burkholderia sp. 383]
 gi|77968630|gb|ABB10010.1| ATPase FliI/YscN [Burkholderia sp. 383]
          Length = 519

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 149/431 (34%), Positives = 224/431 (51%), Gaps = 18/431 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A       +   G ++    +      L   + +G     +      L     +V+    
Sbjct: 76  ARSRRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFAG 133

Query: 68  DIVYICPVGIGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDD 117
           D +++ P      +  G  V+            G  R+       GRV++A G+P+DG  
Sbjct: 134 DRLFLMPTTDVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDGLG 193

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     + R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 194 PL-ASKVDAPLSAPSINPLEREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 252

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 253 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 312

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 313 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 372

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R+LAE G YP +D  AS
Sbjct: 373 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRALAEAGHYPAIDIEAS 432

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 433 ISRAMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 492

Query: 417 LKQSPSDLSSE 427
           L+Q   + +  
Sbjct: 493 LQQGFRECAPF 503


>gi|108810006|ref|YP_653922.1| type III secretion system ATPase [Yersinia pestis Antiqua]
 gi|108813561|ref|YP_649328.1| type III secretion system ATPase [Yersinia pestis Nepal516]
 gi|145600951|ref|YP_001165027.1| type III secretion system ATPase [Yersinia pestis Pestoides F]
 gi|108777209|gb|ABG19728.1| type III secretion system ATP synthase [Yersinia pestis Nepal516]
 gi|108781919|gb|ABG15977.1| putative type III secretion system ATP synthase [Yersinia pestis
           Antiqua]
 gi|145212647|gb|ABP42054.1| type III secretion system ATP synthase [Yersinia pestis Pestoides
           F]
          Length = 448

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 163/411 (39%), Positives = 228/411 (55%), Gaps = 10/411 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I  I       +     V  G+    + +    L +V+ I  ++  + P    + 
Sbjct: 31  RYRGPIVEIGPTLLRASL--PNVAQGELCRIEPQG--MLAEVVSIEQEMALLSPFASSDG 86

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+   A   GR+++ LG PIDG   L       E+    P  + RQ
Sbjct: 87  LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPL--TGQWRELDCPPPSPLTRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            VE+   TGIR ID       GQRIG+FA +G+GKSTLLSM       D ++++L+GERG
Sbjct: 145 PVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERG 204

Query: 200 REVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G  VLL+ DS
Sbjct: 205 REVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADS 264

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REI   +GE P A  +P SVF+ LPRLLER G S+  +G+ITA  +VLV+GD
Sbjct: 265 LTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSD--RGSITAFYTVLVEGD 322

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA +  +   L  
Sbjct: 323 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRR 382

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++  ++E   +  IG Y+ G DL  D+A+ + P I  FL+Q  S     D 
Sbjct: 383 MLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRDPDT 433


>gi|146423660|ref|XP_001487756.1| ATP synthase alpha chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
 gi|146388877|gb|EDK37035.1| ATP synthase alpha chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
          Length = 447

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/382 (25%), Positives = 163/382 (42%), Gaps = 18/382 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +    V I   G    +  G+ V   G+    P      GRV++ LG PIDG   L
Sbjct: 1   MALNLEAGQVGIVLFGSDALVKEGETVKRTGKIVDVPTGPELLGRVVDGLGNPIDGKGPL 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  NASSSSRA-QVKAPGILPRRSVYEPMQTGLKSVDALVPVGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
            T+L+    +D  D       +   VG++   V + ++     D LK S++V AT+ E+ 
Sbjct: 120 DTILNQKKWNDGSDEKKKLYCVYVAVGQKRSTVAQLVQTLEKADALKYSIIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP T   I E+F   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYLAPFTGAAIGEWFRDNGRHSLIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKMSDTLGGGSMTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   +   LKQ      S +
Sbjct: 357 LARGERLTQLLKQKQYSPLSAE 378


>gi|34539315|gb|AAQ74541.1| F1-ATPase alpha subunit [Hedyosmum sp. Stevenson 1188]
          Length = 418

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 93/410 (22%), Positives = 169/410 (41%), Gaps = 24/410 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------------DCFDKVIISL 194
           TG++ +D   P+  GQR  +      GK+ +      +            D +   +   
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDKYIYCVYVA 175

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L
Sbjct: 176 IGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHAL 235

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVI 311
           +I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+ 
Sbjct: 236 IIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALP 295

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K+
Sbjct: 296 VIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQ 355

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +  S    + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 356 VRGSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 402


>gi|34539413|gb|AAQ74590.1| F1-ATPase alpha subunit [Plectocomia elongata]
          Length = 418

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  M R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIMERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|146307844|ref|YP_001188309.1| flagellum-specific ATP synthase [Pseudomonas mendocina ymp]
 gi|145576045|gb|ABP85577.1| flagellar protein export ATPase FliI [Pseudomonas mendocina ymp]
          Length = 448

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 152/434 (35%), Positives = 241/434 (55%), Gaps = 14/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +  + A+  E Y++ + +       G +  +  +      L     +G   +    +
Sbjct: 1   MRLDRVSFARRLEGYTEAISLPSQPILEGRLLRMVGLTLEAEGL--RAAIGSRCLVINGD 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALG 110
           S        +V+  +   +Y+ PVG    I+ G  V       R+       GRV++  G
Sbjct: 59  SYHPVQVEAEVMGFSGGKIYLMPVGSLAGIAPGARVVPLPDAGRLPMGMSMLGRVLDGAG 118

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           + +DG   + K +  + +       +NR  + +    GIR I+    +  GQR+G+FAG+
Sbjct: 119 RALDGKGGM-KAEDWVPVDGPAINPLNRDPISQPLDVGIRTINGLLTVGRGQRLGLFAGT 177

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
           G+GKS LL M  R    + +++ L+GERGREV+EFI++ LG + LK+SVVV + +D++P+
Sbjct: 178 GVGKSVLLGMMTRFTEAEIIVVGLIGERGREVKEFIDEILGAEGLKRSVVVASPADDAPL 237

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           +R  A      IAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++
Sbjct: 238 MRLRAAQYCTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAK 297

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LPRL+ER G  E   G+ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG YP
Sbjct: 298 LPRLVERAGNGEAGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYP 357

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D  +S+SR+  +    ++ K       L  R++++RD+  +G Y PG D   D A+ +
Sbjct: 358 AIDIESSISRVMPQVVPPEQLKQAQRFKQLWSRYQQSRDLISVGAYVPGGDADTDLAIAR 417

Query: 410 VPIIYDFLKQSPSD 423
            P +  +L+Q   +
Sbjct: 418 QPQMAQYLRQGLGE 431


>gi|312622353|ref|YP_004023966.1| ATP synthase F1 subunit beta [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202820|gb|ADQ46147.1| ATP synthase F1, beta subunit [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 467

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 115/406 (28%), Positives = 192/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           GY+  I      +   S+ +  + + +         + +V   +  D V    +G  + +
Sbjct: 6   GYVVQIIGPVIDIRFESENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTDGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   +   G  ++       GR+ N LG+PID    +   D    I    P    +  
Sbjct: 66  RRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGE
Sbjct: 125 AVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      ++K+V+V    +E P  R    LT +T+AEYF      +VLL 
Sbjct: 185 RTREGNDLWLEMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V
Sbjct: 245 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +   +  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 363 TVQQILQRYKELQDIIAILGMDELSEED-KLIVYRARKIQRFLSQP 407


>gi|237785859|ref|YP_002906564.1| F0F1 ATP synthase subunit alpha [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758771|gb|ACR18021.1| ATP synthase alpha chain [Corynebacterium kroppenstedtii DSM 44385]
          Length = 558

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 107/448 (23%), Positives = 191/448 (42%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ +   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGM-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG  S+
Sbjct: 76  VAQNLDTDKVGVVVLGSYETLREGDEVKRTGEVLSIPVGDKFLGRVINPLGQPIDGLGSI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 136 EAEEDRV-LELQAPSVLMRQPVEEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCL 194

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+++  A  +  D     + I   +G++G  +    +    +     + +V A + +S 
Sbjct: 195 DTIINQKANWESGDPEKQVRCIYVAIGQKGSTIAGVRKTLEDNGALDYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     + +++  KG +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFAGAALGQHWMYKGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLSDDLGGGSMTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 375 VRPAINVGVSVSRVGGAAQTKGMKKVSGSLRIDLAAY---RDLEAFAAFASDLDDSSKAQ 431

Query: 407 VHQVPIIYDFLKQSPSDL-SSEDVFQEI 433
           + +   + + LKQ  +   + ED    I
Sbjct: 432 LERGSRLVELLKQPENHPQAVEDQMVSI 459


>gi|161897608|ref|YP_948317.2| F0F1 ATP synthase subunit alpha [Arthrobacter aurescens TC1]
 gi|190358292|sp|A1R7V5|ATPA_ARTAT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 545

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 179/446 (40%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G +++ +     V  L   V   + +  +      LG    
Sbjct: 14  ALNEFAASYEPGNAERVEVGRVTTASDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  + +  +G    I  G  V   G    +     + GRV++ LG+PID    + K +
Sbjct: 70  LDVREIGVIILGDFTGIEEGQEVHRTGEILSVPVGDAFLGRVVDPLGQPIDDLGEI-KAE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 129 ATRALELQAPGVTERKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTII 188

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A     D       +   VG++   +    +        + + +V + + +    + 
Sbjct: 189 NQKANWASGDVTKQVRCVYVGVGQKASTIAAVRQTLEDHGALEYTTIVASPASDPAGFKY 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 249 LAPYAGSAIGQHWMYGGKHVLVIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 308

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  V    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 309 LLERCAKLSDELGAGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   RD++    +   +D    + + + 
Sbjct: 369 VDVGVSVSRVGGAAQVKSMKKVSGTLKLDLAQY---RDMQAFAMFASDLDAASRQQLTRG 425

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    E+    I  
Sbjct: 426 ARLMELLKQGQYSPFPVENQVVSIWA 451


>gi|34539179|gb|AAQ74473.1| F1-ATPase alpha subunit [Amianthium muscitoxicum]
          Length = 418

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 167/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKTMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTKESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQIITEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPI 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D +    +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAVTQALLNRGARLTEVPKQPQ 402


>gi|2827020|gb|AAC38112.1| ATP synthase subunit alpha [Buchnera aphidicola]
          Length = 510

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++QL ++      V       G I S+      +  LS  V LG+ ++     
Sbjct: 1   MQLNSTEISQLIKERIAQFEVFNQSYNEGTIISVNDGIIKIYGLSD-VMLGEMILLP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + I  D +    +G    I+ G  V   G+   +       GR++NALG PID
Sbjct: 57  DNEYAIALNIERDTIGAVVMGPYIHITEGTKVRCTGKILEVPVGVALLGRIVNALGFPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+ + D+ + + +  P  + R+ + +  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGSI-EHDIYLPVEADAPGVIERESINEPIQTGYKAIDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L      +        +   +G++   +   ++     D L  ++VVVA++ E+  L+
Sbjct: 176 TALAIDTIINQKKINLPCVYVAIGQKLSTIINVVKKLDEHDALLNTIVVVASASEAASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G + L++ D +++ A   R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGKDALIVYDDLSKHAVRYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSKEHVKNVTKGKITGKTGSLTALPIIETQSGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+   SVSR+   A +   KKL S +   + ++ E         +   
Sbjct: 356 ESNLFNSGIRPAVNAGISVSRVGSAAQTKIIKKLSSGIRTALAQYHEL---AAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     I + LKQ  
Sbjct: 413 LDQTTRKQLIYGQKITELLKQKQ 435


>gi|68487863|ref|XP_712212.1| hypothetical protein CaO19.14144 [Candida albicans SC5314]
 gi|46433584|gb|EAK93019.1| hypothetical protein CaO19.14144 [Candida albicans SC5314]
          Length = 368

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 162/372 (43%), Gaps = 18/372 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  D V +   G    +  G+ V   G+    P      GRV++ LG PIDG   +
Sbjct: 1   MALNLEADQVGVVLFGSDRLVKEGETVKRTGQIVSVPIGPELLGRVVDGLGNPIDGKGPI 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  KAAAYSRA-QVKAPGILPRRSVHEPMQTGLKSVDALVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
             +L+    ++  D       +   VG++   V + ++     D LK SV+V AT+ E+ 
Sbjct: 120 DAILNQKRWNNGSDEKKKLYCVYVAVGQKRSTVAQLVQTLEQHDALKYSVIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP TA  I E+F   G + L++ D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYIAPFTACAIGEWFRDNGRHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKMSDAYGGGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLK 418
           +++   +   LK
Sbjct: 357 LNRGERLTQLLK 368


>gi|146312178|ref|YP_001177252.1| flagellum-specific ATP synthase [Enterobacter sp. 638]
 gi|145319054|gb|ABP61201.1| ATPase, FliI/YscN family [Enterobacter sp. 638]
          Length = 456

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 164/437 (37%), Positives = 240/437 (54%), Gaps = 19/437 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD----NLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + ++ +       +V+  N 
Sbjct: 17  AKMAQLPSVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQDGNDTQEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E I  G  V+         H G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGILPGARVYAKNNSGDGLHSGK-QLPLGPALLGRVLDGAGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               +    I   V P + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTETGALITQPVNP-LQRTAIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G++TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGITGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      +      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL
Sbjct: 373 SRAMTSLITEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIAVWPQLEAFL 432

Query: 418 KQSPSDLSS-EDVFQEI 433
           +Q   + +  ED  Q +
Sbjct: 433 QQGIFERADWEDSTQAL 449


>gi|30961788|gb|AAP40008.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 369

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 159/364 (43%), Gaps = 10/364 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 10  GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 69

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 70  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 128

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVVV A++ +S  ++ +AP
Sbjct: 129 IDTIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVVNASASDSAAMQYLAP 188

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 189 YAGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 248

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 249 RAAKVCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 308

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E +       +   +D    K + +   +
Sbjct: 309 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERGQRM 365

Query: 414 YDFL 417
            + L
Sbjct: 366 VEVL 369


>gi|34539163|gb|AAQ74465.1| F1-ATPase alpha subunit [Agapanthus africanus]
          Length = 416

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 162/407 (39%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|56413115|ref|YP_150190.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362041|ref|YP_002141678.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56127372|gb|AAV76878.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093518|emb|CAR58979.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 456

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 234/428 (54%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + ++     +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 83  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLE-TGA 141

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 142 LITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRA 201

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 202 DVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 261

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 262 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHI L+R LAE G YP +D  AS+SR      +
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIALSRRLAEAGHYPAIDIEASISRAMTALIT 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 382 EQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERAD 441

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 442 WEDSLQAL 449


>gi|22124440|ref|NP_667863.1| type III secretion system ATPase [Yersinia pestis KIM 10]
 gi|51594678|ref|YP_068869.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP
           32953]
 gi|150260685|ref|ZP_01917413.1| putative type III secretion system ATP synthase [Yersinia pestis
           CA88-4125]
 gi|162421510|ref|YP_001608232.1| type III secretion system ATPase [Yersinia pestis Angola]
 gi|165926753|ref|ZP_02222585.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165936441|ref|ZP_02225009.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010584|ref|ZP_02231482.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213954|ref|ZP_02239989.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167402195|ref|ZP_02307668.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167418696|ref|ZP_02310449.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426202|ref|ZP_02317955.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167470729|ref|ZP_02335433.1| type III secretion system ATPase [Yersinia pestis FV-1]
 gi|186893681|ref|YP_001870793.1| type III secretion system ATPase [Yersinia pseudotuberculosis
           PB1/+]
 gi|218927473|ref|YP_002345348.1| type III secretion system ATPase [Yersinia pestis CO92]
 gi|229836521|ref|ZP_04456687.1| putative type III secretion system ATP synthase [Yersinia pestis
           Pestoides A]
 gi|229840129|ref|ZP_04460288.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842210|ref|ZP_04462365.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904051|ref|ZP_04519164.1| putative type III secretion system ATP synthase [Yersinia pestis
           Nepal516]
 gi|270488963|ref|ZP_06206037.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis KIM D27]
 gi|294502339|ref|YP_003566401.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|21957227|gb|AAM84114.1|AE013654_3 flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|51587960|emb|CAH19563.1| putative type III secretion system ATPase, EscN/SsaN/YscN [Yersinia
           pseudotuberculosis IP 32953]
 gi|115346084|emb|CAL18952.1| putative type III secretion system ATP synthase [Yersinia pestis
           CO92]
 gi|149290093|gb|EDM40170.1| putative type III secretion system ATP synthase [Yersinia pestis
           CA88-4125]
 gi|162354325|gb|ABX88273.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis Angola]
 gi|165915557|gb|EDR34166.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921376|gb|EDR38600.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165990674|gb|EDR42975.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204929|gb|EDR49409.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962690|gb|EDR58711.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048376|gb|EDR59784.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054913|gb|EDR64715.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|186696707|gb|ACC87336.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pseudotuberculosis PB1/+]
 gi|229679821|gb|EEO75924.1| putative type III secretion system ATP synthase [Yersinia pestis
           Nepal516]
 gi|229690520|gb|EEO82574.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696495|gb|EEO86542.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229706205|gb|EEO92213.1| putative type III secretion system ATP synthase [Yersinia pestis
           Pestoides A]
 gi|262360419|gb|ACY57140.1| flagellum-specific ATP synthase [Yersinia pestis D106004]
 gi|262364369|gb|ACY60926.1| flagellum-specific ATP synthase [Yersinia pestis D182038]
 gi|270337467|gb|EFA48244.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pestis KIM D27]
 gi|294352798|gb|ADE63139.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|320013869|gb|ADV97440.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 445

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 163/411 (39%), Positives = 228/411 (55%), Gaps = 10/411 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I  I       +     V  G+    + +    L +V+ I  ++  + P    + 
Sbjct: 28  RYRGPIVEIGPTLLRASL--PNVAQGELCRIEPQG--MLAEVVSIEQEMALLSPFASSDG 83

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+   A   GR+++ LG PIDG   L       E+    P  + RQ
Sbjct: 84  LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPL--TGQWRELDCPPPSPLTRQ 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            VE+   TGIR ID       GQRIG+FA +G+GKSTLLSM       D ++++L+GERG
Sbjct: 142 PVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERG 201

Query: 200 REVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G  VLL+ DS
Sbjct: 202 REVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REI   +GE P A  +P SVF+ LPRLLER G S+  +G+ITA  +VLV+GD
Sbjct: 262 LTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSD--RGSITAFYTVLVEGD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA +  +   L  
Sbjct: 320 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRR 379

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++  ++E   +  IG Y+ G DL  D+A+ + P I  FL+Q  S     D 
Sbjct: 380 MLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRDPDT 430


>gi|302037607|ref|YP_003797929.1| ATPase FliI [Candidatus Nitrospira defluvii]
 gi|300605671|emb|CBK42004.1| ATPase FliI [Candidatus Nitrospira defluvii]
          Length = 435

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 228/420 (54%), Gaps = 10/420 (2%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIR 64
            L++  E      V   G ++    +    +    +  +G+      +G +   + +V+ 
Sbjct: 2   KLSERLEQVEPLSVT--GRVAQAVGIVIEASG--PFTSVGEVCEITREGGHGAVMAEVVG 57

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
              D V + P+G  + I  G  V   G    +       GR+ + LG P+DG   L + D
Sbjct: 58  FREDRVLLMPLGEMQGIGPGSRVVMKGHVASVPVGPQMLGRIFDGLGHPLDGLPPL-RTD 116

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           + + + +     ++R R+ +    GIR I+       GQ+IGVFAGSG+GKS LL M +R
Sbjct: 117 VQVPLYAPPLNPLHRARITQPVDLGIRAINALLTCGQGQKIGVFAGSGVGKSVLLGMISR 176

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D  +I+LVGERGREV+EF+  D   +   +S+VVVATSD+ P++R    L A  IA
Sbjct: 177 YTQADVRVIALVGERGREVKEFLERDLTPEARARSIVVVATSDQPPLVRIRGALVATAIA 236

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G +VLL++DS++R A+S RE+    GE P  +GY  SVF+ LP+LLER+GP++ 
Sbjct: 237 EYFRDCGKHVLLMMDSLSRLAYSQREVGLAIGEPPTTKGYTPSVFAVLPKLLERVGPAQS 296

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT + +VLVDGD+ NDP+AD+VRSILDGHIVL+R LA    +P +D L S SR+  
Sbjct: 297 -GGSITGLYTVLVDGDDLNDPVADAVRSILDGHIVLSRELAARNHFPAIDILQSTSRVMR 355

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              +         +      +  + D+  +G Y+PG    LDKAV     I  FL+Q   
Sbjct: 356 DIVTPAHYAAGRLVLERTALYRRSEDLITLGAYKPGTSKDLDKAVSAHEGITAFLRQETK 415


>gi|189349053|ref|YP_001944681.1| flagellum-specific ATP synthase [Burkholderia multivorans ATCC
           17616]
 gi|189333075|dbj|BAG42145.1| flagellum-specific ATP synthase [Burkholderia multivorans ATCC
           17616]
          Length = 523

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 151/441 (34%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A       +   G ++    +      L   + +G     +      L     +V+  + 
Sbjct: 83  ARSQRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPYAEAEVVGFSG 140

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF----------RISPSACWCGRVINALGKPIDGDD 117
           + +++ P      +  G  V+   R           R+       GRV++A G+P+DG  
Sbjct: 141 ERLFLMPTTDVAGVLPGARVWPLERAPVADPLAGAKRLPVGWEMLGRVVDAAGRPLDGLG 200

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 201 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 259

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 260 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 319

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 320 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 379

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 380 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 439

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 440 ISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 499

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 500 LQQGFRECA---PFAPSLAAL 517


>gi|77166522|ref|YP_345047.1| F0F1 ATP synthase subunit alpha [Nitrosococcus oceani ATCC 19707]
 gi|254435142|ref|ZP_05048649.1| ATP synthase F1, alpha subunit [Nitrosococcus oceani AFC27]
 gi|115312257|sp|Q3J6M9|ATPA_NITOC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|76884836|gb|ABA59517.1| ATP synthase F1 subcomplex alpha subunit [Nitrosococcus oceani ATCC
           19707]
 gi|207088253|gb|EDZ65525.1| ATP synthase F1, alpha subunit [Nitrosococcus oceani AFC27]
          Length = 515

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 184/441 (41%), Gaps = 30/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +Q N   +++L     +           G + S+T     +  L+  V  G+ +   G  
Sbjct: 3   LQLNAAEISELIRKRIEGFEADTEARTEGTVVSLTDGIVRIHGLAD-VMFGEMIEFPG-- 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  + IS GD     GR   +       GRV++ALG PID
Sbjct: 60  -NTYGLAMNLERDSVGAVILGPYQHISEGDRAKCTGRILEVPVGEALLGRVVDALGIPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +   +  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 119 GGGPI-EAQATSPIEKVAPGVITRQSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   +         + ++VV A++ ES  L+
Sbjct: 178 TAVAIDAIINQKGTGIKCIYVAIGQKASSVAGVVRKLEEHGALEHTIVVAASASESAALQ 237

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +T+ A + R+++      P    +P  VF    
Sbjct: 238 FIAPYAGCAMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAFPGDVFYLHS 297

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  I  +V SI DG I L
Sbjct: 298 RLLERSARVNAEHVEKLTEGKVKGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFL 357

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 358 ETDLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGVRLDLAQYRE---LAAFAQFASD 414

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
           +D    K + +   + + +KQ
Sbjct: 415 LDEATRKQLERGQRVTELMKQ 435


>gi|330447290|ref|ZP_08310940.1| ATP synthase F1, alpha subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491481|dbj|GAA05437.1| ATP synthase F1, alpha subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 513

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 99/454 (21%), Positives = 188/454 (41%), Gaps = 32/454 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +N          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISALIKQRIENFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G    +  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --LYALALNLERDSVGAVVMGPYASLQEGMKVTGTGRILEVPVGPALLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETETFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     +   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKNSGIYSVYVAIGQKASTIANVVRKLEEHGALENTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSEHYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 QTELFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +D    K +     + + +KQ     +   VF++
Sbjct: 413 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 444


>gi|189017698|gb|ACD71518.1| F1-ATPase alpha subunit [Burmannia wallichii]
          Length = 395

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 92/391 (23%), Positives = 162/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 3   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 60  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 119 LIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 178

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 179 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 238

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 239 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 298

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 299 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 355

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 356 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 386


>gi|34539443|gb|AAQ74605.1| F1-ATPase alpha subunit [Stauntonia hexaphylla]
          Length = 416

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 164/408 (40%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +    P  + R+ V +   T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVXAPGIIERKSVHEPMXT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK  +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKXAIAIDTILNQKQMNSRGPSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|311281701|ref|YP_003943932.1| ATP synthase F1, alpha subunit [Enterobacter cloacae SCF1]
 gi|308750896|gb|ADO50648.1| ATP synthase F1, alpha subunit [Enterobacter cloacae SCF1]
          Length = 513

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    I    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPV-EHDGFSPIEVIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A     ++ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAAYAGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             SL   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETSLFNSGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|164685610|gb|ABY66751.1| atp1 [Hydrangea seemannii]
          Length = 413

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|42283|emb|CAA23596.1| unnamed protein product [Escherichia coli]
 gi|43264|emb|CAA25780.1| unnamed protein product [Escherichia coli]
          Length = 513

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A +    + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLARMPVALMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|158312876|ref|YP_001505384.1| F0F1 ATP synthase subunit alpha [Frankia sp. EAN1pec]
 gi|226739887|sp|A8L3W3|ATPA_FRASN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158108281|gb|ABW10478.1| ATP synthase F1, alpha subunit [Frankia sp. EAN1pec]
          Length = 553

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 96/447 (21%), Positives = 177/447 (39%), Gaps = 26/447 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCL-----GDFVVHQGKN 55
           +    E +     +Y  +     G    +  V  T   +++   L      + +   G  
Sbjct: 4   LSIRPEEIRDALREYVDSFQATSGDREEVGRVVVTGDGIARVEGLPHTMTNELLEFSGG- 62

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
              LG  + + +  +    +G  E I  G  V   G    +     + GRV++ LG+PID
Sbjct: 63  --VLGLALNLEVGEIGCVILGDAEHIEEGQEVRRTGEILAVPVGDGFLGRVVDPLGRPID 120

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  +  + P  + RQ V++  +TGI+ ID  T +  GQR  +      GK
Sbjct: 121 GLGDIAAA-GTRALELQAPSVVQRQPVKEPLQTGIKAIDAMTAIGRGQRQLIIGDRQTGK 179

Query: 175 ST-----LLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           +T     +++        D     K +   +G++   +RE +           + +V A 
Sbjct: 180 TTVAIDAIINQRDNWASGDPKKQVKCVYVAIGQKKTTIREVVNTLEEAGALAYTTIVAAP 239

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +D+    + +AP T   I +Y+   G + L++ D +++ A + R I+      P    YP
Sbjct: 240 ADQPAGFKYIAPYTGSAIGQYWMYNGQHSLVVFDDLSKQAEAYRAISLLLRRPPGREAYP 299

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   
Sbjct: 300 GDVFYLHSRLLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQIFLESD 359

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K +   L   + ++ E         +   +D 
Sbjct: 360 LFNQGVRPAINVGTSVSRVGGSAQVKAMKSVAGRLRLDLAQYRELE---AFSAFGSDLDK 416

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428
                + +   + + LKQ  +   S +
Sbjct: 417 ASRDQLARGARLVELLKQPQNKPFSVE 443


>gi|161526233|ref|YP_001581245.1| flagellar protein export ATPase FliI [Burkholderia multivorans ATCC
           17616]
 gi|160343662|gb|ABX16748.1| flagellar protein export ATPase FliI [Burkholderia multivorans ATCC
           17616]
          Length = 524

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 151/441 (34%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A       +   G ++    +      L   + +G     +      L     +V+  + 
Sbjct: 84  ARSQRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPYAEAEVVGFSG 141

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF----------RISPSACWCGRVINALGKPIDGDD 117
           + +++ P      +  G  V+   R           R+       GRV++A G+P+DG  
Sbjct: 142 ERLFLMPTTDVAGVLPGARVWPLERAPVADPLAGAKRLPVGWEMLGRVVDAAGRPLDGLG 201

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 202 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 260

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 261 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 320

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 321 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 380

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 381 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 440

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 441 ISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 500

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 501 LQQGFRECA---PFAPSLAAL 518


>gi|15616636|ref|NP_239848.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681395|ref|YP_002467780.1| ATP synthase subunit A [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|257471068|ref|ZP_05635067.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11131212|sp|P57122|ATPA_BUCAI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|254807683|sp|B8D8H1|ATPA_BUCA5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|25290461|pir||F84930 H+-transporting two-sector ATPase (EC 3.6.3.14) alpha chain
           [imported] - Buchnera sp. (strain APS)
 gi|10038699|dbj|BAB12734.1| ATP synthase alpha chain [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624238|gb|ACL30393.1| ATP synthase subunit A [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086908|gb|ADP66988.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087499|gb|ADP67578.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 512

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 112/448 (25%), Positives = 200/448 (44%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   +++L ++      V       G I S++     +  LS  V LG+ ++     
Sbjct: 1   MRLNSTEISKLIKERIAQFEVFNQSYNEGSIISVSDGIIKINGLS-NVMLGEMILLPNNE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + I  D V    +G    IS G  V   G+   +     + GRV+NALG PID
Sbjct: 60  ---YAIALNIERDTVGAVVMGPYIHISEGAKVRCTGKILEVPVGDNFLGRVVNALGFPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G DS+ + D    + +  P  ++R+ V +  +TG +VID   P+  GQR  +      GK
Sbjct: 117 GKDSI-QNDGFFPVEADAPGVIDRKSVNQPIQTGYKVIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++  +     K I   +G++   +   ++    +N    +++VVA++ E+  L+
Sbjct: 176 TALAIDTIINQKQSGIKCIYVAIGQKLSTIINVVKKLEENNALFNTIIVVASASEAASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   +AE+F +KG++ L+I D +++ A + R+I+      P    +P  +F    
Sbjct: 236 YLAPYSGCAMAEFFRNKGEDSLIIYDDLSKHAVAYRQISLLLRRPPGREAFPGDIFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G+ITA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSMEYVQKITKNKITGKTGSITALPIIETQSGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL S +   + ++   +++     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGSAAQTTIIKKLSSGIRTALAQY---QELAAFSQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K ++    I + LKQ      S
Sbjct: 413 LDDTTRKQLNHGQKITELLKQKQYSPIS 440


>gi|312127526|ref|YP_003992400.1| ATP synthase F1 subunit beta [Caldicellulosiruptor hydrothermalis
           108]
 gi|312135222|ref|YP_004002560.1| ATP synthase F1 subunit beta [Caldicellulosiruptor owensensis OL]
 gi|311775273|gb|ADQ04760.1| ATP synthase F1, beta subunit [Caldicellulosiruptor owensensis OL]
 gi|311777545|gb|ADQ07031.1| ATP synthase F1, beta subunit [Caldicellulosiruptor hydrothermalis
           108]
          Length = 467

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 115/406 (28%), Positives = 192/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           GY+  I      +   S+ +  + + +         + +V   +  D V    +G  + +
Sbjct: 6   GYVVQIIGPVIDIRFESENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTDGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   +   G  ++       GR+ N LG+PID    +   D    I    P    +  
Sbjct: 66  RRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGE
Sbjct: 125 AVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      ++K+V+V    +E P  R    LT +T+AEYF      +VLL 
Sbjct: 185 RTREGNDLWLEMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V
Sbjct: 245 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +   +  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 363 TVQQILQRYKELQDIIAILGMDELSEED-KLIVYRARKIQRFLSQP 407


>gi|296170249|ref|ZP_06851842.1| ATP synthase F1 sector alpha subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895125|gb|EFG74843.1| ATP synthase F1 sector alpha subunit [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 552

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 96/434 (22%), Positives = 173/434 (39%), Gaps = 23/434 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +    ++ +   +  G +         V  L   V   + +   G     LG  + 
Sbjct: 13  SAIEEYVGSFTSDTSREEVGTVVEAGDGIAHVEGL-PSVMTQELLEFPGG---VLGVALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   V    +G  E+I  G  V   G    +     + GRV++ LG PIDG   +   D
Sbjct: 69  LDEHSVGAVILGDFEKIEEGQQVKRTGEVLSVPVGDAFLGRVVDPLGHPIDGRGDID-TD 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
           +   +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 128 IRRALEIQAPSVVQRQSVSEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTIL 187

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +     +  D+      +   +G++G  +               + +V A + +S   + 
Sbjct: 188 NQRGNWESGDEKKQVRCVYVAIGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   IA+++   G +VL++ D +++ A + R I+      P    YP  VF    R
Sbjct: 248 LAPYTGSAIAQHWMYDGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG   L   L  +G  P 
Sbjct: 308 LLERCAKLSDELGGGSLTGLPIIETKANDISAYIPTNVISITDGQCFLESDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + ++ E         +   +D      + + 
Sbjct: 368 INVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELESFAA---FASDLDATSKAQLERG 424

Query: 411 PIIYDFLKQSPSDL 424
             + + LKQ     
Sbjct: 425 ERLVELLKQPQYQP 438


>gi|188532670|ref|YP_001906467.1| HrcN protein (hrp cluster) [Erwinia tasmaniensis Et1/99]
 gi|188027712|emb|CAO95565.1| HrcN protein (hrp cluster) [Erwinia tasmaniensis Et1/99]
          Length = 454

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 153/450 (34%), Positives = 244/450 (54%), Gaps = 20/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GK 54
           M    ++L Q A+   + L     V + G ++ I+ +   + C      +GD    Q   
Sbjct: 3   MSALRQSLTQWAQRQQQRLEGYAPVSRYGRVTGISGIL--IECTLPGARIGDLCRIQRSD 60

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
               L +++  + + + +  +G  + IS G ++        I  S    G V++  G+ +
Sbjct: 61  GGSVLSEIVGFSPEKILLSALGALDGISQGAIIIPLYLPHSICVSERLLGSVLDGFGRAL 120

Query: 114 DGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +          G    ++ +++  PP   R R++    TG+R ID    + +GQR+G+FA
Sbjct: 121 EPGGHSAFAKPGTKVRAVPVLNDAPPPTERPRIDTPLPTGLRAIDGLLTIGNGQRVGIFA 180

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   ++V++ ATSD S
Sbjct: 181 GAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRS 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV+
Sbjct: 241 SMERARAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVY 300

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  +  +G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   
Sbjct: 301 TLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNH 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR           +    L  L+  +++   +  +G Y+PG D + D AV
Sbjct: 359 YPAIDILASLSRTMSNVVEPTHMQQAGRLRSLMAAYQQVEMLIRLGEYQPGNDGLTDAAV 418

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   II  FL+QS   + + D F++    L
Sbjct: 419 NANDIINRFLRQS---MRAPDPFEQTQYHL 445


>gi|302871779|ref|YP_003840415.1| ATP synthase F1, beta subunit [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574638|gb|ADL42429.1| ATP synthase F1, beta subunit [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 467

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 192/408 (47%), Gaps = 13/408 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
             GY+  I      +   S+ +  + + +         + +V   +  D V    +G  +
Sbjct: 4   SVGYVVQIIGPVIDIRFESENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTD 63

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G   +   G  ++       GR+ N LG+PID    +   D    I    P    +
Sbjct: 64  GLRRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               + F+TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + V
Sbjct: 123 VPAVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGV 182

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   +      ++K+V+V    +E P  R    LT +T+AEYF      +VL
Sbjct: 183 GERTREGNDLWLEMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++
Sbjct: 243 LFIDNIFRFIQAGSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAI 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +   +
Sbjct: 301 YVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYV 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 ARTVQQILQRYKELQDIIAILGMDELSEED-KLIVYRARKIQRFLSQP 407


>gi|57868878|gb|AAW57435.1| ATP synthase alpha subunit [Hydrangea sp. JS-2005]
          Length = 396

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 90/403 (22%), Positives = 166/403 (41%), Gaps = 23/403 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 357 RGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 396


>gi|308187293|ref|YP_003931424.1| flagellum-specific ATP synthase [Pantoea vagans C9-1]
 gi|308057803|gb|ADO09975.1| flagellum-specific ATP synthase [Pantoea vagans C9-1]
          Length = 456

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 156/439 (35%), Positives = 232/439 (52%), Gaps = 21/439 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-- 61
           +L+   +         V + G ++  T +    T L   + LG   + +  +   + +  
Sbjct: 11  SLDAFEKRITQVQP--VRRYGRLTRATGLVLEATGL--QLPLGATCIIERNDGKTISEIE 66

Query: 62  --VIRINLDIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALG 110
             V+  N   + + P+   + I  G  V+            +  + P     GRV++  G
Sbjct: 67  SEVVGFNGQKLLMMPLEEVDGILPGARVYARQNGDNPQAGKQLMLGP--ELLGRVLDGSG 124

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+DG  S   G     +++     + R  +     TG+R I+    +  GQR+G+FAGS
Sbjct: 125 RPLDGLPSPDTG-YRAPLITPPFNPLQRTPITDVLDTGVRAINALLTVGRGQRMGLFAGS 183

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
           G+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+
Sbjct: 184 GVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPL 243

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++
Sbjct: 244 LRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAK 303

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R L E G YP
Sbjct: 304 LPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLGEAGHYP 363

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+  
Sbjct: 364 AIDIEASISRAMTSLIDENHYAQVRQFKQLLSSFQRNRDLVSVGAYAAGSDPMLDKAIRL 423

Query: 410 VPIIYDFLKQSPSDLSSED 428
            P +  FL+Q   + S  D
Sbjct: 424 YPQMEAFLQQGIFERSDYD 442


>gi|89092249|ref|ZP_01165203.1| ATP synthase alpha chain [Oceanospirillum sp. MED92]
 gi|89083337|gb|EAR62555.1| ATP synthase alpha chain [Oceanospirillum sp. MED92]
          Length = 514

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 102/447 (22%), Positives = 186/447 (41%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G + S++    T+  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEILKKRIETLDVTSEARNEGTVVSVSDGIITIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDG 115
              G  + +  D V    +G  +++  G      GR    P      GRV++ALG PIDG
Sbjct: 60  -IYGMALNLERDSVGAVVLGDYQDLVEGATARCTGRILEVPIGPELQGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + +  L+  +    P  + RQ V++  +TG++ ID   P+  GQR  +     IGKS
Sbjct: 119 KGPV-ETKLTDAVEKVAPGVIERQGVDQPVQTGLKAIDSMVPIGRGQRELIIGDRQIGKS 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++  + D   K I   VG++   +   +           ++VV A + +   ++ 
Sbjct: 178 AIAIDAIINQKDTGVKCIYVAVGQKQSTIANVVRKLEEHGAMDHTIVVAAGASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYYRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++T++  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEKFTDGEVKGQTGSLTSLPVIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNSGVRPAINAGLSVSRVGGAAQTKIIKKLGGGVRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DDATRDQLEHGQSVTELMKQKQYSPMS 441


>gi|45440276|ref|NP_991815.1| type III secretion system ATPase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|45435132|gb|AAS60692.1| putative type III secretion system ATP synthase [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 446

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 163/411 (39%), Positives = 228/411 (55%), Gaps = 10/411 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I  I       +     V  G+    + +    L +V+ I  ++  + P    + 
Sbjct: 29  RYRGPIVEIGPTLLRASL--PNVAQGELCRIEPQG--MLAEVVSIEQEMALLSPFASSDG 84

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+   A   GR+++ LG PIDG   L       E+    P  + RQ
Sbjct: 85  LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPL--TGQWRELDCPPPSPLTRQ 142

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            VE+   TGIR ID       GQRIG+FA +G+GKSTLLSM       D ++++L+GERG
Sbjct: 143 PVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERG 202

Query: 200 REVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G  VLL+ DS
Sbjct: 203 REVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADS 262

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REI   +GE P A  +P SVF+ LPRLLER G S+  +G+ITA  +VLV+GD
Sbjct: 263 LTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSD--RGSITAFYTVLVEGD 320

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA +  +   L  
Sbjct: 321 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRR 380

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++  ++E   +  IG Y+ G DL  D+A+ + P I  FL+Q  S     D 
Sbjct: 381 MLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRDPDT 431


>gi|221215782|ref|ZP_03588741.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD1]
 gi|221164318|gb|EED96805.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD1]
          Length = 527

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 151/441 (34%), Positives = 228/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A       +   G ++    +      L   + +G     +      L     +V+  + 
Sbjct: 87  ARSQRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPYAEAEVVGFSG 144

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF----------RISPSACWCGRVINALGKPIDGDD 117
           + +++ P      +  G  V+   R           R+       GRV++A G+P+DG  
Sbjct: 145 ERLFLMPTTDVAGVLPGARVWPLERAPVADPLAGAKRLPVGWEMLGRVVDAAGRPLDGLG 204

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 205 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 263

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 264 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 323

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 324 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 383

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 384 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 443

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 444 ISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 503

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 504 LQQGFRECA---PFASSLAAL 521


>gi|34539263|gb|AAQ74515.1| F1-ATPase alpha subunit [Commelina communis]
          Length = 418

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 95/409 (23%), Positives = 168/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G       + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGXAXXXENENVGIVIFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
                    P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTFSIVDVPAGRAMLGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDTLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 357 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 402


>gi|22023565|gb|AAM89128.1|AF419242_1 ATP synthase beta subunit [Pentaphylax euryoides]
          Length = 394

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 92/402 (22%), Positives = 165/402 (41%), Gaps = 23/402 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT  +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATVSDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
            K++  S    + ++ E   +  +  +   +D      +++ 
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRG 394


>gi|82702477|ref|YP_412043.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196]
 gi|82410542|gb|ABB74651.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196]
          Length = 470

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 160/448 (35%), Positives = 243/448 (54%), Gaps = 29/448 (6%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           KN   LA+++  +        G ++ +T +    T L   V  G  ++    NS    +V
Sbjct: 15  KNCSGLAEVSPPFQ-----ISGSLTRVTGLIMEATGLKLAVGSGCTILMPNGNS-MEAEV 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVF---HWGRF------------------RISPSACW 101
           +  + D +Y+ P      ++ G  V      G                    R       
Sbjct: 69  VGFHGDRLYLMPAHGMFGLAPGAKVVPWDRTGVLPNPGSASRQRRRASDQISRFPVGEAL 128

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++  G+P+D    L + + S          ++R+ + +    G+R I+    +  G
Sbjct: 129 LGRVVDGTGRPLDNLGPL-EVERSASAAGSPINPLDREPISEVLDVGVRAINALLTVGRG 187

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE  LG + L +SVVV
Sbjct: 188 QRMGLFAGSGVGKSVLLGMMARYTSADIIVVGLIGERGREVKDFIEQILGAEGLARSVVV 247

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P++R      A ++AEYF  +G NVLLI+DS+TR+A + REIA   GE P  +
Sbjct: 248 AAPADTWPLMRLQGASYATSVAEYFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATK 307

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP+L+ER G   K  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R
Sbjct: 308 GYPPSVFAKLPQLVERAGNGVKGSGSITAFYTVLAEGDDQQDPIADAARAILDGHIVLSR 367

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D  AS+SR      S +  + V +   L  R++ +RD+  +G Y PG D
Sbjct: 368 QLAESGHYPAIDIEASISRAMTSLISPEYFEQVRNFKQLFSRYQRSRDLISVGAYSPGND 427

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +LD+A+   P +  FL+Q+  + +  +
Sbjct: 428 RLLDRAIALYPKLEHFLQQTMVERAGYE 455


>gi|119948355|gb|ABM07266.1| ATP synthase F1, alpha subunit [Arthrobacter aurescens TC1]
          Length = 556

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 179/446 (40%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G +++ +     V  L   V   + +  +      LG    
Sbjct: 25  ALNEFAASYEPGNAERVEVGRVTTASDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 80

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  + +  +G    I  G  V   G    +     + GRV++ LG+PID    + K +
Sbjct: 81  LDVREIGVIILGDFTGIEEGQEVHRTGEILSVPVGDAFLGRVVDPLGQPIDDLGEI-KAE 139

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 140 ATRALELQAPGVTERKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTII 199

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A     D       +   VG++   +    +        + + +V + + +    + 
Sbjct: 200 NQKANWASGDVTKQVRCVYVGVGQKASTIAAVRQTLEDHGALEYTTIVASPASDPAGFKY 259

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 260 LAPYAGSAIGQHWMYGGKHVLVIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 319

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  V    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 320 LLERCAKLSDELGAGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 379

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   RD++    +   +D    + + + 
Sbjct: 380 VDVGVSVSRVGGAAQVKSMKKVSGTLKLDLAQY---RDMQAFAMFASDLDAASRQQLTRG 436

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    E+    I  
Sbjct: 437 ARLMELLKQGQYSPFPVENQVVSIWA 462


>gi|7620547|gb|AAF64660.1| F1 ATPase alpha subunit [Nymphaea odorata]
          Length = 414

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/412 (22%), Positives = 167/412 (40%), Gaps = 25/412 (6%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-------------VIISLV 195
           ++ +D   P+  GQR  +      GK+ +      +                   +   +
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQIHSKSKGISESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 404


>gi|319760156|ref|YP_004124094.1| ATP synthase subunit alpha [Candidatus Blochmannia vafer str. BVAF]
 gi|318038870|gb|ADV33420.1| ATP synthase subunit alpha [Candidatus Blochmannia vafer str. BVAF]
          Length = 513

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   K       +   G I+++      +  LS  V  G+ +      
Sbjct: 1   MQLNSNEISELIKRRIKQYNIEVEIRNEGTITTVRDGVIHIYGLS-NVMQGEMIALP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  + V    +G  E IS G L    G   ++       GRV+NALG PID
Sbjct: 57  EHKFAVALNLERNSVGAVVLGSYENISEGMLTKCTGDILKVPVGKELLGRVVNALGIPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
              ++        I SK P  ++RQ + +  +TG + ID   P+  GQR  +      GK
Sbjct: 117 NKGAVNCS-CYYPIESKAPGVIDRQSISEPIQTGYKAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           S L      +      K I   +G++   V   ++     N    ++V++A++ ES +L+
Sbjct: 176 SALAIDTIINQRFSGVKCIYVAIGQKATTVANVVKKLEEHNALGNTIVILASASESAVLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF + G++ L++ D +++ A + R+I+      P    YP  +F    
Sbjct: 236 YLAPYAGCAMGEYFRNHGEDALIVYDDLSKQAIAYRQISLLLKRPPGREAYPGDIFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  I  +V SI DG I L
Sbjct: 296 RLLERSAKVNVNYIEHNTEGRVMGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   K L   +   + ++ E         +   
Sbjct: 356 ESYLFNAGIRPAVNPGISVSRVGGAAQTNIMKTLSGGIRTALAQYREL---AAFSQFSSE 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +H    + + LKQ  
Sbjct: 413 LDSSTRKQLHHGQKVTELLKQKQ 435


>gi|325264569|ref|ZP_08131299.1| ATP synthase F1, alpha subunit [Clostridium sp. D5]
 gi|324030231|gb|EGB91516.1| ATP synthase F1, alpha subunit [Clostridium sp. D5]
          Length = 505

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 179/426 (42%), Gaps = 20/426 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  +E    +++D       + G + S+     TV  +  +V  G+ V          G
Sbjct: 16  LKNEIENFNSISKD------SEVGTVISVGDGIATVYGI-DHVMYGEIVTFHNG---LKG 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V  I  D +     G   EI  G  V   G+   +     + GRV+++LG P+DG   +
Sbjct: 66  MVQDIRKDAIGCILFGHDTEIKEGTKVTRTGKKAGVPVGDKYIGRVVDSLGMPVDGKGEI 125

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    I  + P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++  
Sbjct: 126 -PADGYRPIEQEAPGIIDRKSVSVPLETGILSIDAMFPIGRGQRELIIGDRQTGKTSIAL 184

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
               +        I   +G++   V + +     +     ++VV +T+ +   L+ +AP 
Sbjct: 185 DTIINQKGKDVVCIYVAIGQKASTVAKVVNTLKTNGAMDYTIVVCSTASDCAPLQYIAPY 244

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +   +AE+F  +G +VL++ D +++ A + R ++   G  P    YP  VF    RLLER
Sbjct: 245 SGTAMAEHFMHQGKDVLIVYDDLSKHAVAYRSLSLLLGRSPGREAYPGDVFYLHSRLLER 304

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+  
Sbjct: 305 SSRLSDALGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVG 364

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK   S+   + ++ E     +   +   +D    + +     + 
Sbjct: 365 LSVSRVGGAAQTKAMKKASGSIRIDLAQYREME---IFTQFSSDLDASTKEQLDYGGGLM 421

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 422 ELLKQP 427


>gi|41408551|ref|NP_961387.1| F0F1 ATP synthase subunit alpha [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118465149|ref|YP_880764.1| F0F1 ATP synthase subunit alpha [Mycobacterium avium 104]
 gi|254774347|ref|ZP_05215863.1| F0F1 ATP synthase subunit alpha [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|81571204|sp|Q73X57|ATPA_MYCPA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158512434|sp|A0QCX6|ATPA_MYCA1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|41396909|gb|AAS04770.1| AtpA [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118166436|gb|ABK67333.1| ATP synthase F1, alpha subunit [Mycobacterium avium 104]
          Length = 554

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 98/417 (23%), Positives = 171/417 (41%), Gaps = 22/417 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +         V  L   V   + +   G     LG  + ++   V    +G  E+I
Sbjct: 30  EVGTVVDAGDGIAHVEGL-PSVMTQELLEFPGG---VLGVALNLDEHSVGAVILGDFEKI 85

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV+N LG+PIDG   + + D+   +  + P  + RQ 
Sbjct: 86  EEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPIDGQGDI-ETDIRRALEIQAPSVVQRQS 144

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDK-----V 190
           V++  +TGI+ ID  TP+  GQR  +      GK      T+L+     +  D+      
Sbjct: 145 VKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCVDTILNQRQNWESGDEKKQVRC 204

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++G  +               + +V A + +S   + +AP T   IA+++   G
Sbjct: 205 VYVAIGQKGTTIASVRRALEEGGAMDYTTIVAAPASDSAGFKWLAPYTGSAIAQHWMYDG 264

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      E   G++
Sbjct: 265 KHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSM 324

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +    ++ +  I  +V SI DG   L   L  +G  P ++   SVSR+   A   
Sbjct: 325 TGLPIIETKANDISAYIPTNVISITDGQCFLESDLFNQGVRPAINVGVSVSRVGGAAQIK 384

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             K++  SL   + +F E         +   +D      + +   + + LKQ     
Sbjct: 385 AMKEVAGSLRLDLSQFRELE---AFAAFASDLDATSKAQLDRGARLVELLKQPQYQP 438


>gi|34539433|gb|AAQ74600.1| F1-ATPase alpha subunit [Scilla libanotica]
          Length = 401

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 94/392 (23%), Positives = 165/392 (42%), Gaps = 20/392 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGERGREVREFIEDYLGDNL- 214
            +      GK      T+L+    +DC +      +   +G++   V + ++     N  
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQLNDCSESKKLYCVYVAIGQKRSTVAQLVQILPEANAL 183

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++    
Sbjct: 184 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 243

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  I 
Sbjct: 244 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPIT 303

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I     L   G  P ++   SVSR+   A     K++  S    + R+ E   +   
Sbjct: 304 DGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELARYRE---VAAF 360

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             +   +D       ++   + +  KQ   + 
Sbjct: 361 AQFGSDLDAATQALPNRGARLTEVPKQPQYEP 392


>gi|329942353|ref|ZP_08291163.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila psittaci Cal10]
 gi|332286995|ref|YP_004421896.1| type III secretion system ATPase [Chlamydophila psittaci 6BC]
 gi|325507218|gb|ADZ18856.1| type III secretion system ATPase [Chlamydophila psittaci 6BC]
 gi|328815263|gb|EGF85251.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Chlamydophila psittaci Cal10]
          Length = 410

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 153/409 (37%), Positives = 239/409 (58%), Gaps = 11/409 (2%)

Query: 36  VTCLSQYVCLGDFVVHQGKN-SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RF 93
           +  +   V +G+  + +       + +V+    +  ++ P+G    +S    V   G   
Sbjct: 3   IKAVVPNVRVGEVCLVKRYGMEPLVTEVVGFTQNFAFLSPLGELTGVSPSSEVIPTGMPL 62

Query: 94  RISPSACWCGRVINALGKPIDG--DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
            I       GRV+N LG+PID      L   + +  +    P  ++R+++     TG+R 
Sbjct: 63  YIRAGNGLLGRVLNGLGEPIDSEIKGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRC 122

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-FDKVIISLVGERGREVREFIE-DY 209
           ID    +  GQRIG+FAG+G+GKS+LL M AR+    D  +I+L+GERGREVREFIE D 
Sbjct: 123 IDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIGERGREVREFIEGDL 182

Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
             + +K+SV+VV+TSD+S  LR  A      IAEYF  +G  V+L++DS+TRFA ++RE+
Sbjct: 183 GEEGMKRSVIVVSTSDQSSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREV 242

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
              +GE P   GY  SVFS LPRLLER G S+K  G ITA  +VLV GD+ N+P+AD V+
Sbjct: 243 GLAAGEPPARGGYTPSVFSTLPRLLERSGASDK--GTITAFYTVLVAGDDMNEPVADEVK 300

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SILDGH+VL+ +LA+   YP +D LAS+SRL       ++++++     ++ +++    +
Sbjct: 301 SILDGHVVLSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEML 360

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             IG YR G D  +D A+  +  +  FLKQ   + ++   ++E +++L+
Sbjct: 361 IRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEKTN---YEEASQQLR 406


>gi|254418613|ref|ZP_05032337.1| ATPase FliI/YscN family [Brevundimonas sp. BAL3]
 gi|196184790|gb|EDX79766.1| ATPase FliI/YscN family [Brevundimonas sp. BAL3]
          Length = 447

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 161/427 (37%), Positives = 240/427 (56%), Gaps = 9/427 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           V  G ++ ++ +          + +G       +    L  +V+        + P G  E
Sbjct: 15  VVTGKVAGVSGLLIESRGGLSRLAVGARAEISRRGQTALPAEVVGFRDAKALLMPFGPVE 74

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G  +    +   + P+  W GR+I+A G PIDG   L +G +   + +  PPA +R
Sbjct: 75  GVAPGAEIRIIDQAASVRPTTAWLGRIIDAFGNPIDGKGPLPQGPVPYPLRAPPPPAHSR 134

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
            RV +    G+R +D+FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GER
Sbjct: 135 GRVGERLDLGVRAMDVFTTTCRGQRLGIFAGSGVGKSVLLSMLAKQATCDAVVVGLIGER 194

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+E+    + L+++VVVVATSDE  + R+ +    + IAEY   +   VL ++D
Sbjct: 195 GREVREFVEETLGEEGLRRAVVVVATSDEPALKRRQSAYMTMAIAEYLRDQDLEVLCLMD 254

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVIS 312
           S+TRFA + REI   +GE P  +GY  +VF+ELP+LLER GP            ITA+ +
Sbjct: 255 SVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPVRPDGTTAAPITALFT 314

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDG +H++PIAD+VR ILDGHIV++R +AE GR+P +D L SVSR      +  E++L
Sbjct: 315 VLVDGGDHDEPIADAVRGILDGHIVMDRKIAERGRFPAIDVLKSVSRTMPACQTPPEREL 374

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQ 431
                  +  +    ++  IG YR G D I+D+A+   P + DFL Q   D +   D F 
Sbjct: 375 NKRARQCLSAYANMEELIKIGAYRTGADPIVDRAIALNPALEDFLSQDKDDATRLTDSFT 434

Query: 432 EITKKLQ 438
            +   L 
Sbjct: 435 RLEHILN 441


>gi|164685634|gb|ABY66763.1| atp1 [Pontederia cordata]
          Length = 413

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|34539283|gb|AAQ74525.1| F1-ATPase alpha subunit [Drimys winteri]
          Length = 416

 Score =  293 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 91/411 (22%), Positives = 167/411 (40%), Gaps = 23/411 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 403


>gi|219681951|ref|YP_002468335.1| ATP synthase subunit A [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254807684|sp|B8D6S5|ATPA_BUCAT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|219621684|gb|ACL29840.1| ATP synthase subunit A [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086333|gb|ADP66414.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 512

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 112/448 (25%), Positives = 200/448 (44%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N   +++L ++      V       G I S++     +  LS  V LG+ ++     
Sbjct: 1   MRLNSTEISKLIKERIAQFEVFNQSYNEGSIISVSDGIIKINGLS-NVMLGEMILLPNNE 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + I  D V    +G    IS G  V   G+   +     + GRV+NALG PID
Sbjct: 60  ---YAIALNIERDTVGAVVMGPYIHISEGAKVRCTGKILEVPVGDNFLGRVVNALGFPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G DS+ + D    + +  P  ++R+ V +  +TG +VID   P+  GQR  +      GK
Sbjct: 117 GKDSI-QNDGFFPVEADAPGVIDRKSVNQPIQTGYKVIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++  +     K I   +G++   +   ++    +N    +++VVA++ E+  L+
Sbjct: 176 TALAIDTIINQKQSGIKCIYVAIGQKLSTIINVVKKLEENNALFNTIIVVASASEAASLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   +AE+F +KG++ L+I D +++ A + R+I+      P    +P  +F    
Sbjct: 236 YLAPYSGCAMAEFFRNKGEDSLIIYDDLSKHAVAYRQISLLLRRPPGREAFPGDIFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G+ITA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSMEYVQKITKNKITGKTGSITALPIIETQSGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL S +   + ++   +++     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGSAAQTTIIKKLSSGIRTALAQY---QELAAFSQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    K ++    I + LKQ      S
Sbjct: 413 LDDTTRKQLNHGQKITELLKQKQYSPIS 440


>gi|6561698|gb|AAF17042.1|AF197710_1 ATPase alpha subunit [Lactoris fernandeziana]
          Length = 411

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 93/412 (22%), Positives = 168/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D       H+   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPHRGARLTEVPKQQQYEP 404


>gi|254444371|ref|ZP_05057847.1| ATP synthase F1, alpha subunit [Verrucomicrobiae bacterium DG1235]
 gi|198258679|gb|EDY82987.1| ATP synthase F1, alpha subunit [Verrucomicrobiae bacterium DG1235]
          Length = 510

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 103/444 (23%), Positives = 179/444 (40%), Gaps = 28/444 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   +E + Q   +     V    G I +I      +  LS+     + +   G     +
Sbjct: 1   MSSVIEQIEQQIANLQATTVQSNTGKIVTIADGVAKIDGLSE-AMYNEMIEFPGG---TI 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V +  +G    +  GD     GR   +       GRV+NALG+P+DG   
Sbjct: 57  GIALNLEEDDVGVVILGESTHLKAGDEAKCTGRLLSVPVGKGLLGRVVNALGQPVDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + +  +    P  + R+ V++   TGI  ID   P+  GQR  +    G GK+T+ 
Sbjct: 117 VESTE-TYPVEKIAPGIIERKSVDQPLATGIMAIDSMIPIGRGQRELIIGDRGTGKTTIA 175

Query: 179 SMFARSDCF---------------DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222
                +                     I   VG++   V   +      D LK +++V A
Sbjct: 176 IDTIINQAKINDVGLASGDANFRPVYSIYVAVGQKNSNVARTLGVLEEADALKYTIIVSA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + ++   + +AP + V +AE+F S G + L++ D +++ A + R+++           Y
Sbjct: 236 PAADAAADQYLAPYSGVAMAEWFMSNGMDALIVYDDLSKHAAAYRQMSLVLKRPSGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     +E GN  +TA+  +     + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSARVNEENGNGSVTALPIIETLAGDLSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P V    SVSR+   A     K++   +   + +F E   +     +   +D
Sbjct: 356 DLFNQGIRPAVSVGLSVSRVGSAAQIKATKQVAGKIKLELAQFRE---LAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDL 424
                 + +   I +  KQ   + 
Sbjct: 413 AKTKAQLDRGSRIVELFKQPAFNP 436


>gi|34539219|gb|AAQ74493.1| F1-ATPase alpha subunit [Brocchinia reducta]
          Length = 411

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 162/406 (39%), Gaps = 22/406 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVE---SASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVGER 198
           ++ +D   P+  GQR  +      GK+ +      +                +   +G++
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+     L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILPEANALEYSILVAATASGPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN--ITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      + G    TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGTGSSTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 398


>gi|189017680|gb|ACD71509.1| F1-ATPase alpha subunit [Burmannia flava]
          Length = 399

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 92/394 (23%), Positives = 163/394 (41%), Gaps = 22/394 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 7   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 63

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 64  VVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 122

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 123 LIIGDRQTGKTAIAIDTLLNQKQINSRSTSESETLYCVYVAIGQKRSTVAQLVKILSEAN 182

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 183 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 243 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 303 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSSKLELAQYRE---VA 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               +   +D      +++   + +  KQ   + 
Sbjct: 360 AFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 393


>gi|326566567|gb|EGE16713.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 12P80B1]
 gi|326577726|gb|EGE27602.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis O35E]
          Length = 514

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 185/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +   ++L         G I S++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISNLIKQRIQDLDVSATAKTEGVIVSVSDGIVQIHGLEE-AMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G   +  GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+ ++    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++ A+ +   K +   +G++   +   +           + VVVA++ E   L+ 
Sbjct: 178 ALAIDAIIAQKNSGIKCVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNADYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P V+   SVSR+   A +   KKL   +   + ++ E         +   +
Sbjct: 358 SNLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +     + + +KQ  
Sbjct: 415 DDATKQQLEHGVRVTELMKQKQ 436


>gi|30250026|ref|NP_842096.1| flagellar ATP synthase [Nitrosomonas europaea ATCC 19718]
 gi|30139133|emb|CAD85997.1| Flagellar ATP synthase [Nitrosomonas europaea ATCC 19718]
          Length = 478

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 164/456 (35%), Positives = 239/456 (52%), Gaps = 26/456 (5%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L+   +L E  +  LV   G ++ +  +      L   V     V     NS    +V+ 
Sbjct: 26  LQNCQRLIEPANSFLV--SGTLTRVAGLVMEAVGLKLAVGTSCIVFLPNGNSVT-AEVVG 82

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW---------GRFR------------ISPSACWCG 103
            + + +++ P G    ++ G  V            G  +            IS      G
Sbjct: 83  FSGERLFLMPSGDIYGLTPGAKVVPTEYTGAVPRIGTLQHPRRRAADRTKHISVGPELLG 142

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV+N  G P+D    L  G  S+ + S+    + R  +EK    G+R I+    +  GQR
Sbjct: 143 RVLNGSGDPLDRYGPLHCG-HSVPLYSRPFNPLERAPIEKTLDVGVRAINTLLSVGRGQR 201

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222
           +G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A
Sbjct: 202 MGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVQEFIEHILGPEGLARSVVVAA 261

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D SP++R      A  IAEYF  +G +VLLI+DS+TR A + REI+   GE P  +GY
Sbjct: 262 PADTSPLMRLHGAAYATAIAEYFRDEGKHVLLIMDSLTRVAMAQREISLAIGEPPATKGY 321

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P SVF+ LP+L+ER G   +  G+ITA  +VL + D+ NDPIAD+ R+ILDGHIVL+R L
Sbjct: 322 PPSVFARLPQLVERAGNGRRGSGSITAFYTVLTENDDPNDPIADNARAILDGHIVLSRRL 381

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR+     + ++         L  R++ + D+  +G Y  G D  
Sbjct: 382 AEAGHYPAIDIEASISRVMASLVTREQLGQAQRFKALYSRYQRSHDLISVGAYASGSDPQ 441

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LD+A+   P++  FL+Q   +  S     E    LQ
Sbjct: 442 LDRAIELYPVLESFLQQGMFEQESYIESMEKLSALQ 477


>gi|227548010|ref|ZP_03978059.1| F0F1 ATP synthase subunit alpha [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227079916|gb|EEI17879.1| F0F1 ATP synthase subunit alpha [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 555

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 104/442 (23%), Positives = 188/442 (42%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G ++S       V+ L       + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVTSAADGIAQVSGL-PGCMTNELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               +  D + +  +G  E ++ GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 76  VAQNLETDSIGVVVLGNFETLTEGDEVKRTGEVLSIPVGEDFLGRVINPLGQPIDGLGPI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  +    ++RQ VE+   TG++ ID  TP+  GQR  +      GK     
Sbjct: 136 EASE-ERALELQAAGVLDRQPVEEPMATGMKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 194

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  D     + I   +G++G  +             + + +V A + +S 
Sbjct: 195 DTILNQKAFWESGDPSKQVRCIYVAIGQKGSTIAGVRRTLEEHGALEYTTIVAAPASDSA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +A  + +++  +G +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFSAAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 315 LHSRLLERAAKLNDELGAGSLTALPIIETKANDVSAFIPTNVISITDGQVFLQSDLFNQG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P +D   SVSR+   A +   KK+  SL   +  +   RD+     +   +D    + 
Sbjct: 375 VRPAIDVGISVSRVGGAAQTKGMKKVAGSLRLDLAAY---RDLEAFAAFASDLDSASKRQ 431

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ  +   S +
Sbjct: 432 LERGQRLVELLKQQENAPQSVE 453


>gi|94264096|ref|ZP_01287895.1| ATPase FliI/YscN [delta proteobacterium MLMS-1]
 gi|93455512|gb|EAT05702.1| ATPase FliI/YscN [delta proteobacterium MLMS-1]
          Length = 437

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 151/427 (35%), Positives = 244/427 (57%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           +++L+  GG +S +  +          V  + +  V +G+ S    +V+      V + P
Sbjct: 12  NQSLITVGGRVSQVIGMVIESDGPGIPVGSICEVEVFRGR-STVPAEVVGFREGRVLLMP 70

Query: 75  VGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G    +  G  +    G+ R++ S    GR+I+ LG+P+DG   L  G+    + ++  
Sbjct: 71  LGEMRGVEPGSAIRLAEGQARVTVSQALLGRIIDGLGQPMDGGPPL-PGEAFYPLYAEPL 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M R+R+++    G+R I+    L  GQRIG+ AGSG+GKSTL+ M AR    D  +I+
Sbjct: 130 NPMERERIQEPVDVGVRSINGLLTLGKGQRIGIMAGSGVGKSTLMGMIARHTAADISVIA 189

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGRE+++FI  D   + L +SVV+VATSD+ P++R      A+ +AEYF     +V
Sbjct: 190 LIGERGRELKDFIERDLGPEGLARSVVIVATSDQPPLVRMRGAYLAMAVAEYFRDHDRDV 249

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           +L++DS+TR+A S RE+    GE P +RGY  SVF +LP+LLER G  +  KG+IT + +
Sbjct: 250 VLMMDSVTRYAMSSREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSITGIFT 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLV+GD+ N+PIAD+VRSI+DGHIVL+R LA +G YP ++   SVSR      SA++ + 
Sbjct: 309 VLVEGDDMNEPIADAVRSIVDGHIVLSRDLAGQGHYPAIEVSGSVSRCMSDVASAEQIEA 368

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQ 431
                 +I  +  + D+  IG Y  G +  +D A+  +  +  +L+Q     +  +D   
Sbjct: 369 AHRFLEIISLYRRSEDLINIGAYAKGSNPKIDNAIAMIDQLNGYLRQQVEQQVPYKDSVA 428

Query: 432 EITKKLQ 438
           ++    +
Sbjct: 429 QLLALFK 435


>gi|12659347|gb|AAG60208.1| ATPase alpha subunit [Amborella trichopoda]
          Length = 413

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 165/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFHLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQIRLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|145628862|ref|ZP_01784662.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 22.1-21]
 gi|144979332|gb|EDJ89018.1| F0F1 ATP synthase subunit alpha [Haemophilus influenzae 22.1-21]
          Length = 451

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 30/440 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +               G I S++     +  LS  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKKRIAQFDVVSEARNTGTIVSVSDGIIRIHGLSD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAMALNLERDSVGAVVMGPYADLAEGMEVQCTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGEI-ENDGFSPVEVIAPGVIDRRSVDQPVQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K I   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQRNSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEDYVEKFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGSAQTKVIKKLAGGIRTALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLK 418
           +D    K +     + + LK
Sbjct: 413 LDDATRKQLSHGEKVTELLK 432


>gi|259506260|ref|ZP_05749162.1| ATP synthase F1, alpha subunit [Corynebacterium efficiens YS-314]
 gi|23493152|dbj|BAC18123.1| H+-ATPase alpha subunit [Corynebacterium efficiens YS-314]
 gi|259166164|gb|EEW50718.1| ATP synthase F1, alpha subunit [Corynebacterium efficiens YS-314]
          Length = 557

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 185/436 (42%), Gaps = 27/436 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 20  DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 75

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 76  VAQNLDTDSVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEKFLGRVINPLGQPIDGLGEI 135

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK     
Sbjct: 136 VAEEDRV-LELQAPSVLERQPVEEPMATGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCV 194

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +    +        + + +V A + ++ 
Sbjct: 195 DTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQGALEYTTIVAAPASDAA 254

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 255 GFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 314

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G+ITA+  +    ++ +  I  +V SI DG + L   L   G
Sbjct: 315 LHSRLLERAAKLSDDLGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNRG 374

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 375 VRPAINVGISVSRVGGAAQTKGMKKVAGSLRLDLAAY---RDLEAFATFASDLDAASKAQ 431

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   +   L QS +
Sbjct: 432 LERGQRLVQLLIQSEN 447


>gi|296112607|ref|YP_003626545.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis RH4]
 gi|295920301|gb|ADG60652.1| ATP synthase F1 alpha subunit [Moraxella catarrhalis RH4]
 gi|326560867|gb|EGE11232.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 7169]
 gi|326563895|gb|EGE14146.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 46P47B1]
 gi|326566904|gb|EGE17043.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 103P14B1]
 gi|326569766|gb|EGE19816.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC8]
 gi|326570797|gb|EGE20822.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC1]
 gi|326575093|gb|EGE25021.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis CO72]
 gi|326576821|gb|EGE26728.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis 101P30B1]
          Length = 514

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +   ++L         G I S++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISNLIKQRIQDLDVSATAKTEGVIVSVSDGIVQIHGLEE-AMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G   +  GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+ ++    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++ A+ +   K +   +G++   +   +           + VVVA++ E   L+ 
Sbjct: 178 ALAIDAIIAQKNSGIKCVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNADYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SNLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +     + + +KQ  
Sbjct: 415 DDATKQQLEHGVRVTELMKQKQ 436


>gi|164685686|gb|ABY66789.1| atp1 [Liquidambar styraciflua]
          Length = 413

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 165/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQNNLNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|326391019|ref|ZP_08212568.1| ATP synthase F1, beta subunit [Thermoanaerobacter ethanolicus JW
           200]
 gi|325992964|gb|EGD51407.1| ATP synthase F1, beta subunit [Thermoanaerobacter ethanolicus JW
           200]
          Length = 461

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 115/405 (28%), Positives = 191/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           GYI+ +      +    +   + + +    ++ + + +V   I  ++V    +   + + 
Sbjct: 4   GYITQVIGPVVDIRFEGELPPINNAIKIPMEDRELVVEVSQHIGDNVVRCVAMASTDGLK 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR+ N LG+PID    +      M I  K PP   +   
Sbjct: 64  RGMECIDTGSPIMVPVGKGTLGRMFNVLGQPIDELGEVKDVKY-MSIHRKAPPFEEQSPA 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +    S+   VGER
Sbjct: 123 TEILETGIKVIDLLTPYPKGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  E   +      + K+  V    +E P  R    L  +T+AEYF  +   +VLL +
Sbjct: 183 SREGNELWHEMHESGVIDKTAFVFGQMNEPPGARMRVGLAGLTMAEYFRDEEHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V +V V 
Sbjct: 243 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATDLGLLQERI--TSTKKGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +      +   +   
Sbjct: 301 ADDLTDPAPATTFTHLDATTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 VQEILQRYKELQDIIAILGMEELTEED-KLIVYRARKIQRFLSQP 404


>gi|20146628|gb|AAM12468.1| ATP synthase alpha subunit [Sarcosperma laurinum]
          Length = 389

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 92/397 (23%), Positives = 164/397 (41%), Gaps = 23/397 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  D V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVRIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDAILNQKQMNSRSTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G++TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            + ++ E   +     +   +D      +++   + +
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 389


>gi|304412516|ref|ZP_07394122.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|307307175|ref|ZP_07586913.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
 gi|304349158|gb|EFM13570.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|306910414|gb|EFN40845.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
          Length = 445

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 152/424 (35%), Positives = 238/424 (56%), Gaps = 9/424 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G +  +  +   V  +   + +GD    +G+N   +  +V+  + D++ + P+ 
Sbjct: 14  PVARVYGRLIRVNGLLLEV--VGCQLGMGDRCQIEGRNGRLIEAEVVGFHRDVLCLMPIE 71

Query: 77  IGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V        I+      GRV++ LG+P+D    L       +  +   P 
Sbjct: 72  PTQGLMPGARVLPITDEQTIAIGDGLLGRVLDGLGQPLDSLGDLTDISQVSQSHTSYNPL 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQ + +    GIR I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+
Sbjct: 132 L-RQPIRQPLDVGIRAINSLLPIGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLI 190

Query: 196 GERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFIE+    +  K++V++ A +D +P++R  A   + +IA  F  +G  VLL
Sbjct: 191 GERGREVREFIEETLGEEGRKRAVIIAAPADTTPLMRLRAMRLSHSIACAFRDQGKQVLL 250

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA + GE P  +GYP S F++LPRL+E  G  E   G +TA  +VL
Sbjct: 251 LVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DP+AD+ R+ILDGHIVL+R LAE+G +P +D  ASVSRLA    ++   +   
Sbjct: 311 AEGDDQQDPVADAARAILDGHIVLSRKLAEQGHFPAIDINASVSRLAMHIATSSSIEQSQ 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
              HL+ R+ E RD+  +GGY+ G D  +D AV   P +  FL+Q+     S+    E  
Sbjct: 371 IFRHLLSRYNEVRDLLPLGGYQAGQDPEMDLAVRVYPEMARFLRQTTH---SKVNLAESL 427

Query: 435 KKLQ 438
            +L+
Sbjct: 428 AQLE 431


>gi|303239771|ref|ZP_07326295.1| ATP synthase F1, alpha subunit [Acetivibrio cellulolyticus CD2]
 gi|302592708|gb|EFL62432.1| ATP synthase F1, alpha subunit [Acetivibrio cellulolyticus CD2]
          Length = 506

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 101/425 (23%), Positives = 169/425 (39%), Gaps = 16/425 (3%)

Query: 6   ETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y +K  V   G++ S       +  L +    G+ +  +   S   G  + 
Sbjct: 10  SIIKQQIESYGNKEKVDDVGFVLSAGDGIARIYGL-KNCMYGELLEFE---SGVYGMAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D +     G G E+  G  V   G+   +       GRVIN LGKPIDG   +    
Sbjct: 66  LEEDNIGSVLFGEGLEVKEGTQVRRTGKPVEVPVGMELIGRVINPLGKPIDGKGPISSNQ 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  ++R+ V    +TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 126 FR-PIERPAPGVIDRKSVNTPLQTGIMAIDAMVPIGRGQRELIIGDRQTGKTAIAIDAII 184

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   VG++   V   I        +  +VVV +T+ +   ++ +AP     
Sbjct: 185 NQKGKDVICVYVSVGQKASTVVGIINTLQEFGAMDYTVVVSSTASDMSTVQYIAPYAGCA 244

Query: 241 IAEYFSSKGDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AE F       + ++ D +++ A + R ++      P    +P  VF    RLLER   
Sbjct: 245 VAEEFMYNHKKDVLIVYDDLSKHAVAYRAMSLLLRRPPGREAFPGDVFYLHSRLLERSAK 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SV
Sbjct: 305 LSDSLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIYLESQLFHSGQRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK+  S+   + ++ E   + +   +   +D      + Q   + + L
Sbjct: 365 SRVGGAAQIKAMKKVAGSIRINLAQYRE---LVVFSQFGSDLDKATRDKLLQGERLVETL 421

Query: 418 KQSPS 422
           KQS  
Sbjct: 422 KQSLH 426


>gi|154503954|ref|ZP_02041014.1| hypothetical protein RUMGNA_01780 [Ruminococcus gnavus ATCC 29149]
 gi|153795381|gb|EDN77801.1| hypothetical protein RUMGNA_01780 [Ruminococcus gnavus ATCC 29149]
          Length = 505

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 103/429 (24%), Positives = 182/429 (42%), Gaps = 15/429 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  E++       + G + ++     T+  +  +   G+ V     ++   G V 
Sbjct: 13  ISILKEEIENFDSVSKDSEVGTVVAVGDGIATIYGI-DHAMYGEIVTF---DTGLKGMVQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + + +   G   +I  G  V   G+   +     + GRV+NALG PIDG   + + 
Sbjct: 69  DIQKNEIGVILFGRDTDIKEGTKVTRTGKKAGVPVGNKYVGRVVNALGAPIDGKGEI-EA 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  + P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 128 DDYRPIEQEAPGIIDRKSVSVPMETGILSIDAMFPIGRGQRELIIGDRQTGKTSIAMDTI 187

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +      D L  ++VV +T+ +   L+ +AP    
Sbjct: 188 LNQKGKDVICIYVAIGQKASTVAKVVNTLKNNDALDYTIVVSSTASDCAPLQYIAPYAGT 247

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AE+F  +G +VL++ D +++ A + R ++   G  P    YP  VF    RLLER   
Sbjct: 248 AMAEHFMYQGKDVLIVYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLERSSR 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 308 LSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFAAGMRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   S+   + ++ E     +   +   +D    + +     + + L
Sbjct: 368 SRVGGAAQTKAMKKASGSIRIDLAQYREME---VFTQFSSDLDAATKEQLEYGSGLMELL 424

Query: 418 KQSPSDLSS 426
           KQ      S
Sbjct: 425 KQPLYHPLS 433


>gi|301320444|gb|ADK69087.1| ATP synthase F1, alpha subunit [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 525

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 107/434 (24%), Positives = 184/434 (42%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++  E + +   +Y+K +V  + G + S+      +  L   +  G+F+       +  
Sbjct: 5   IKEISEMIEEQIRNYNKEIVQTEQGTVVSVGDGIALIYGLDNAIM-GEFLKFPN---NVY 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDS 118
           G V+ +    V    +G    I  GD+V    +           GRVINAL KPID    
Sbjct: 61  GMVLNLEESAVGAVILGDETLIREGDIVKRTNKVVETPVGDALLGRVINALSKPIDNLGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +     +  I       M R+ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 INFTK-TRPIERVATSVMARRSVSQPLETGILAIDSAIPIGKGQRELIIGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
             ++  + +   K I   +G++   + + +E          +VVV A + +   L+ ++P
Sbjct: 180 IDAIINQKNKNVKCIYVAIGQKDSTIVQVVEKLKKYGAMEYTVVVNAGASQPAPLQYLSP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              VTIAE +   G++VL+I D +++ A S R+++      P    YP  VF    RLLE
Sbjct: 240 YVGVTIAEEWMENGNDVLIIYDDLSKHAVSYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +    G+ITA+  +     + +  I  +V SI DG I L+  L  +G  P VD 
Sbjct: 300 RAARVNENYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLSSELFNQGVRPAVDI 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E     L   +   +D      + Q   I
Sbjct: 360 GPSVSRVGSAAQIKSIKQVSGTLKLELAQYYELE---LFAKFGSDLDEATKATLDQGAKI 416

Query: 414 YDFLKQSPSDLSSE 427
              L Q   +   +
Sbjct: 417 IQMLIQKQHNPLEQ 430


>gi|24376221|ref|NP_720265.1| F0F1 ATP synthase subunit alpha [Shewanella oneidensis MR-1]
 gi|81588953|sp|Q8E8B8|ATPA_SHEON RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|24351281|gb|AAN57708.1|AE015907_6 ATP synthase F1, alpha subunit [Shewanella oneidensis MR-1]
          Length = 513

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFAIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGVRVTELMKQKQ 435


>gi|316967484|gb|EFV51901.1| ATP synthase F1, alpha subunit [Trichinella spiralis]
          Length = 604

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 94/440 (21%), Positives = 180/440 (40%), Gaps = 37/440 (8%)

Query: 1   MQKNLETLAQLAEDY--SKNLV---VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           + +    ++ + ED   SK++    V+ G + SI      V  L + +   + V     +
Sbjct: 84  LTEEPAEVSSVLEDRILSKSIAADFVETGRVLSIGDGIARVYGL-RNIQAEEMVEF---S 139

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  + +  D V +   G  + I  GDLV   G    +       GRV++ALG PID
Sbjct: 140 SGLKGMALNLESDNVGVVVFGNDKLIKEGDLVKRTGAIVDVPVGEELLGRVVDALGNPID 199

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +        +  K P  + R  V +   +G++ +D   P+  GQR  +      GK
Sbjct: 200 GLGPIN-TKKRSRVGVKAPGIIPRISVREPMLSGMKAVDSLVPIGRGQRELIIGDRQTGK 258

Query: 175 STLLSMFARSDCFDK----------VIISLVGERGREVREFIEDYLGDNLKK-SVVVVAT 223
           + +      +                I   +G++   V + ++  +     K +++V AT
Sbjct: 259 TAIAIDTIINQKAVHEGKDEKKKLYCIYVAIGQKRSTVAQIMKRLIDSGAMKYTIIVSAT 318

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++  L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    YP
Sbjct: 319 ASDAAPLQYLAPYSGCAMGEYFRDSGRHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYP 378

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 379 GDVFYLHSRLLERAAKLNDKFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETE 438

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   S            + ++  S+   + ++ E   +     +   +D 
Sbjct: 439 LFYKGIRPAINVGLS----------PVDYQVAGSMKLELAQYRE---VAAFAQFGSDLDA 485

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
              + +++   + + LKQ  
Sbjct: 486 STQQLLNRGVRLTELLKQGQ 505


>gi|222529413|ref|YP_002573295.1| F0F1 ATP synthase subunit beta [Caldicellulosiruptor bescii DSM
           6725]
 gi|254808126|sp|B9MS68|ATPB_ANATD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222456260|gb|ACM60522.1| ATP synthase F1, beta subunit [Caldicellulosiruptor bescii DSM
           6725]
          Length = 467

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 116/406 (28%), Positives = 192/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           GY+  I      +   S+ +  + + +         + +V   +  D V    +G  + +
Sbjct: 6   GYVVQIIGPVIDIRFESENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTDGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   +   G  ++       GR+ N LG+PID    +   D    I    P    +  
Sbjct: 66  RRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGE
Sbjct: 125 AVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   D      ++K+V+V    +E P  R    LT +T+AEYF      +VLL 
Sbjct: 185 RTREGNDLWLDMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V
Sbjct: 245 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +   +  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 363 TVQQILQRYKELQDIIAILGMDELSEED-KLIVYRARKIQRFLSQP 407


>gi|33519489|ref|NP_878321.1| F0F1 ATP synthase subunit alpha [Candidatus Blochmannia floridanus]
 gi|81666732|sp|Q7VQV8|ATPA_BLOFL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|33517152|emb|CAD83534.1| ATP synthase alpha subunit [Candidatus Blochmannia floridanus]
          Length = 513

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N+  ++ +  +  K L         G I+S+      +  LS  V  G+ +      
Sbjct: 1   MRLNVNEISDIIRNRIKQLDIGCETRNEGTITSVADGVIYIHGLS-NVMQGEMIALP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +         +G  E IS G +V   G   R+       GRV+NALG PID
Sbjct: 57  YNKFAIALNLESSATGAIVMGSYENISEGMVVKCTGDILRVPVGPELLGRVVNALGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +    I S  P  ++RQ + +  +TG + ID   P+  GQR  +      GK
Sbjct: 117 NKGLINCSNY-YPIESDAPGVIDRQSINEPIQTGYKSIDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           S L   ++  +S    K I   +G++   V   ++       L  ++V++A++ ES IL+
Sbjct: 176 SALAIDTIINQSCSGVKCIYVAIGQKATTVVNVVKKLEEYHALDNTIVILASASESAILQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF + G + L++ D +++ A + R+++      P    YP  +F    
Sbjct: 236 YLAPYSGCAMGEYFRNNGQDALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  I  +V SI DG I L
Sbjct: 296 RLLERSAKVRSEYIERCTQGKITGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++P  SVSR+   A +   K L   +   + ++ E         +   
Sbjct: 356 ESQLFNAGVRPAINPGISVSRVGGSAQTKIMKVLSGGIRTALAQYREL---AAFSQFSSE 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D +  K +     + + LKQ  
Sbjct: 413 LDNVTRKQLQHGQKVTELLKQKQ 435


>gi|307265810|ref|ZP_07547361.1| ATP synthase F1, beta subunit [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919205|gb|EFN49428.1| ATP synthase F1, beta subunit [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 461

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 116/405 (28%), Positives = 191/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           GYI+ +      +    +   + + +    ++ + + +V   I  ++V    +   + + 
Sbjct: 4   GYITQVIGPVVDIRFEGELPPINNAIKIPMEDRELVVEVSQHIGDNVVRCVAMASTDGLK 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR+ N LG+PID    +      M I  K PP   +   
Sbjct: 64  RGMECIDTGSPIMVPVGKGTLGRMFNVLGQPIDELGEVKDVKY-MSIHRKAPPFEEQSPA 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +    S+   VGER
Sbjct: 123 TEILETGIKVIDLLTPYPKGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  E   +      + K+  V    +E P  R    L  +T+AEYF  +   +VLL +
Sbjct: 183 SREGNELWHEMHESGVIDKTAFVFGQMNEPPGARMRVGLAGLTMAEYFRDEEHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +  +KG+IT+V +V V 
Sbjct: 243 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +      +   +   
Sbjct: 301 ADDLTDPAPATTFTHLDATTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 VQEILQRYKELQDIIAILGMEELTEED-KLIVYRARKIQRFLSQP 404


>gi|251789497|ref|YP_003004218.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya zeae Ech1591]
 gi|247538118|gb|ACT06739.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya zeae Ech1591]
          Length = 459

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 150/446 (33%), Positives = 234/446 (52%), Gaps = 18/446 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGK 54
           +      L Q      + L     V + G I  I+ +    +       +GD   V +  
Sbjct: 7   IDTRYPQLTQWLRRQQRRLAAYSPVTRQGQIIGISGILLESSL--PNARIGDLCLVERND 64

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
           +S  L +++  +    ++  +G  + I+ G +V        +  S    G V++  G+P+
Sbjct: 65  SSQVLAEIVGFSPSNTFLSALGALDGIAQGAVVTPLYQPHCVQVSDALFGSVLDGFGRPL 124

Query: 114 DGDDS---LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
           +       +  GDL+   M ++   PP   R R+     TG+R ID    +  GQR+GVF
Sbjct: 125 EEGGHSAFVEPGDLNANPMPVIGDAPPPTERPRIADPLPTGMRAIDGLLTIGCGQRVGVF 184

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDE 226
           AG+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +       ++V+V +TSD 
Sbjct: 185 AGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEQLRSRTVLVCSTSDR 244

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S + R  A  TA  IAE F + G  VLLI+DS+TRFA + REI    GE     G P SV
Sbjct: 245 SSMERARAAFTATAIAEAFRAAGKQVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSV 304

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           ++ LPRL+ER G  +  +G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE  
Sbjct: 305 YTLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERN 362

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D L S+SR        +  +  +++  L+  +++   +  +G Y+PG D + D A
Sbjct: 363 HYPAIDVLMSLSRTMSNVVEREHTRNANAVRRLMAAYKQVEMLIRLGEYQPGHDALTDAA 422

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQE 432
           V     I  FL+Q+  +  S +  Q 
Sbjct: 423 VSANDDINRFLQQAMREPQSFEFIQS 448


>gi|196018141|ref|XP_002118745.1| hypothetical protein TRIADDRAFT_34652 [Trichoplax adhaerens]
 gi|190578319|gb|EDV18772.1| hypothetical protein TRIADDRAFT_34652 [Trichoplax adhaerens]
          Length = 467

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 97/412 (23%), Positives = 173/412 (41%), Gaps = 22/412 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  +         L   V   + V     +S   G V  I  D V I  +G  ++I
Sbjct: 25  EVGQVVKVFDGIAIAFGL-DNVEFNEIVKF---DSGIQGIVFNIEEDNVGIVILGDDKDI 80

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G++V     F R+       GRV++A G P+D    + K  +  ++  K P  + R+ 
Sbjct: 81  KEGEIVKRTKEFFRVPTGKNLLGRVVDAFGNPLDNKGEI-KDVVYKKVDVKAPGIIARKS 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKV 190
           V +  +TGI+ ID   P+  GQR  +     +GK+ +          ++           
Sbjct: 140 VHEPVQTGIKAIDSLIPIGRGQRELIIGDRQVGKTAIAIDTILNQKEINKSDNESEKLYC 199

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V + ++        + S+VVVA++ +   L+  AP    T+ E+F   G
Sbjct: 200 IYVAVGQKKSSVAKIVKKLEETGALEYSIVVVASASDPTPLQFYAPYVGCTMGEFFRDNG 259

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI-- 307
            + L+I D +++ A + R+++      P    YP  +F    RLLER      E G+   
Sbjct: 260 MHSLVIYDDLSKHAIAYRQMSLLLRRPPGREAYPGDIFYVHSRLLERAAKLSDEMGSGSL 319

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 320 TALPIIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIKPAINVGLSVSRIGSSAQIN 379

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             KK+  ++   + ++ E +       +   +D      + +   + + LKQ
Sbjct: 380 AMKKVAGTMKLDLAQYREMQ---AFSQFSSDLDSATKNLLERGDKLTELLKQ 428


>gi|260598450|ref|YP_003211021.1| flagellum-specific ATP synthase [Cronobacter turicensis z3032]
 gi|260217627|emb|CBA31919.1| Flagellum-specific ATP synthase [Cronobacter turicensis z3032]
          Length = 470

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 160/436 (36%), Positives = 238/436 (54%), Gaps = 17/436 (3%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A+      V + G ++  T +    T L   + LG   + + +    L     +V+  N 
Sbjct: 31  AKMAQLPSVRRYGRLTRATGLVLEATGL--QLPLGATCIIERQEGTQLQEVESEVVGFNG 88

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSL 119
             +++ P+   E I  G  V+             ++       GRV++  GKP+DG  S 
Sbjct: 89  QKLFLMPLEEVEGILPGARVYARAGLGEGLQSSKQLPLGPQLLGRVLDGAGKPLDGLPS- 147

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +  +++     + R  +E     G+R I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 148 PDTETTGALITPPFNPLQRTAIEDVLDVGVRPINALLTVGRGQRMGLFAGSGVGKSVLLG 207

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A
Sbjct: 208 MMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYA 267

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G
Sbjct: 268 TRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAG 327

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+S
Sbjct: 328 NGITGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASIS 387

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S +    V +   L+  F+  RD+  +G Y  G D +LD+A+   P +  FL+
Sbjct: 388 RVMTAIISEEHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDRAITLWPQLEAFLQ 447

Query: 419 QSPSDLS-SEDVFQEI 433
           Q   + S  ED  Q +
Sbjct: 448 QGIYERSGVEDALQAL 463


>gi|294339865|emb|CAZ88228.1| flagellum-specific ATP synthase [Thiomonas sp. 3As]
          Length = 448

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 154/423 (36%), Positives = 240/423 (56%), Gaps = 6/423 (1%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQ 61
           ++L+ L    +      +V  G +  +  +      L     LG+      + +  +  +
Sbjct: 8   RHLQNLQHRLQSGGPLPLVYSGSLVRVRGLILEAQGLE--ASLGERCRISTEQNRVIDAE 65

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLG 120
           V+  N D V +  +G  + ++ G  V    G  RI       GRV++  G+P+DGD +L 
Sbjct: 66  VVGFNGDHVQLMALGEVQGLTPGARVHPVPGDIRIPVGPELLGRVLDGNGRPLDGDGALL 125

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
               +     ++ P + R  V +    G+R I+    +  G R+G+FAGSG+GKS LL M
Sbjct: 126 ASHYTTLSTQQINP-LARALVRQPLDVGVRAINALFTVGRGARMGLFAGSGVGKSVLLGM 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR+   D +++ L+GERGREV+EFIED LG +   ++VVV A +D   + R      A 
Sbjct: 185 MARNTNADVIVVGLIGERGREVKEFIEDILGVEGRSRAVVVAAPADAPALTRIRGARLAT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEY+  +G NVLL++DS+TR+A ++RE+A  +GE P ARG+P SVF++LP L+ER G 
Sbjct: 245 AMAEYYRDQGLNVLLLMDSVTRYALALREVALAAGEPPAARGFPPSVFAKLPALVERAGN 304

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             +  G+ITA  +VL++GD+  DP+AD+VR+ILDGHIVL+R LAE+G +P +D  AS+SR
Sbjct: 305 GPEGGGSITAFYTVLMEGDDQQDPVADNVRAILDGHIVLSRRLAEQGHFPAIDLQASISR 364

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     +  E + +  L  +  R+   +D+  +G Y PG DL LD+AV     I +FL Q
Sbjct: 365 VMPAIATPLELRRMQKLKEMQSRYASQQDLIAVGAYTPGADLQLDQAVQAHAGIREFLIQ 424

Query: 420 SPS 422
              
Sbjct: 425 DMH 427


>gi|164685682|gb|ABY66787.1| atp1 [Gunnera sp. CWD 94.84]
          Length = 413

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      S                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILSQKQMNSRGTSESDTLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|152965619|ref|YP_001361403.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216]
 gi|151360136|gb|ABS03139.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216]
          Length = 453

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 173/431 (40%), Positives = 250/431 (58%), Gaps = 10/431 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           Q+A           G +S I  +   V+ L     +G+ V    +      +V+      
Sbjct: 21  QVARAVEAARPEVRGRVSGIVGLSVEVSGLE--AAVGETVRLGDERYSIPAEVVAAEGSR 78

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           +   P+G    ++ G       R   +       GRV++ALG P+DG   L        +
Sbjct: 79  LRCLPLGHLTGLAAGAPAVAVRRPSDVPVGPALLGRVVDALGNPLDGGPPLHTAP-RGPL 137

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  PPAM R RV+     G+R +D   P   GQR G+FAGSG+GKS+LLSM AR    D
Sbjct: 138 HATPPPAMTRGRVDAPLSLGVRALDTLVPAGRGQRFGIFAGSGVGKSSLLSMIARGTSAD 197

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +++LVGERGREVREF+ED LG + L +SVVV+ATSDE+P+LR  A LTA T+AE F  
Sbjct: 198 VSVLALVGERGREVREFLEDDLGPEGLARSVVVIATSDEAPVLRLRASLTATTVAESFRD 257

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G + +L++DS+TR A + REI  + GE P  RGYP SVF+ +PRLLER GP     G+I
Sbjct: 258 MGADCVLMMDSLTRVAMAQREIGLSVGEPPATRGYPPSVFALMPRLLERAGPGVT--GSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T + +VLVDGD+HN+PIAD+ RSILDGH+VL+R LA  G +P +D L SVSR+A +  + 
Sbjct: 316 TGIYTVLVDGDDHNEPIADNARSILDGHVVLDRRLATAGHFPTIDVLESVSRVAGRVTTP 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           ++K   ++L  ++    + +++  +G Y+PG +  +D AV Q+P I  FL+Q   D++  
Sbjct: 376 EQKSAATALRRVMAAHRDAKELIDVGAYQPGANPEVDAAVAQLPAINAFLRQDIHDITPA 435

Query: 428 DVFQEITKKLQ 438
               +   +LQ
Sbjct: 436 P---QAWAQLQ 443


>gi|262273114|ref|ZP_06050931.1| ATP synthase alpha chain [Grimontia hollisae CIP 101886]
 gi|262222870|gb|EEY74178.1| ATP synthase alpha chain [Grimontia hollisae CIP 101886]
          Length = 513

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 104/454 (22%), Positives = 189/454 (41%), Gaps = 32/454 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEKFNVVSEARNEGTIVSVSDGIIRIHGLAD-AMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFALALNLERDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAS-LTSPVEVIAPGVIARQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L   ++  + +     I   +G++   +   +      D LK ++VVVA++ E+  L+
Sbjct: 176 TALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHDALKNTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +D    K +     + + +KQ     +   VF++
Sbjct: 413 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 444


>gi|269128115|ref|YP_003301485.1| ATP synthase F1 subunit alpha [Thermomonospora curvata DSM 43183]
 gi|268313073|gb|ACY99447.1| ATP synthase F1, alpha subunit [Thermomonospora curvata DSM 43183]
          Length = 546

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 93/435 (21%), Positives = 170/435 (39%), Gaps = 23/435 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  LE   Q  E        + G +         +  L       + +  +       G
Sbjct: 11  IRNALERFVQSYEP-EAAAREEVGTVVDSGDGIAHIEGL-PSAMANELLEFEDG---TRG 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + +++  +    +G    I  G  V   G    +     + GRV++ALG P+DG   L
Sbjct: 66  LALNLDVREIGAVVLGDFSGIEEGQKVRRTGEVLSVPVGDAYLGRVVDALGNPLDGKGPL 125

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +    +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK+T+  
Sbjct: 126 ELTE-RRALELQAPTVVQRQSVFEPLQTGIKAIDAMTPIGRGQRQLIIGDRQTGKTTVCI 184

Query: 180 MFARSDCFD----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +   +          + I   VG++G  +               + +V A + +  
Sbjct: 185 DTIINQKENWLSGDEKKQVRCIYVAVGQKGSTIANVRRTLEEAGAMEYTTIVAAPASDPA 244

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +++ A + R I+      P    YP  VF 
Sbjct: 245 GFKYIAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFY 304

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +   G++ +  I  +V SI DG   L   L  +G
Sbjct: 305 LHSRLLERCAKLSDEMGGGSLTGLPIIETKGNDVSAFIPTNVISITDGQCFLETDLFNQG 364

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     KK+  +L   + ++ E         +   +D      
Sbjct: 365 VRPAINVGISVSRVGGAAQIKAMKKVAGTLRLALSQYRELE---AFAAFASDLDAASRAQ 421

Query: 407 VHQVPIIYDFLKQSP 421
           + +   + + LKQ  
Sbjct: 422 LERGARLVELLKQPQ 436


>gi|113972254|ref|YP_736047.1| F0F1 ATP synthase subunit alpha [Shewanella sp. MR-4]
 gi|114049503|ref|YP_740053.1| F0F1 ATP synthase subunit alpha [Shewanella sp. MR-7]
 gi|123029178|sp|Q0HD77|ATPA_SHESM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|123130903|sp|Q0HPF9|ATPA_SHESR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|113886938|gb|ABI40990.1| ATP synthase F1, alpha subunit [Shewanella sp. MR-4]
 gi|113890945|gb|ABI44996.1| ATP synthase F1, alpha subunit [Shewanella sp. MR-7]
          Length = 513

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFAIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVEKFTKGAVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGVRVTELMKQKQ 435


>gi|12659367|gb|AAG60218.1| ATPase alpha subunit [Dioscorea mexicana]
          Length = 413

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSQSETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|72162808|ref|YP_290465.1| F0F1 ATP synthase subunit alpha [Thermobifida fusca YX]
 gi|124007222|sp|Q47M80|ATPA_THEFY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71916540|gb|AAZ56442.1| ATP synthase F1, alpha subunit [Thermobifida fusca YX]
          Length = 547

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 184/447 (41%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG--GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L +  + Y  +   +   G ++        V+ L       + +  +       G   
Sbjct: 13  DALQRFVQSYEPDAAAREEIGTVTYSGDGIARVSGL-PSAMANELLEFEDG---TQGIAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            + +  + +  +G    I+ G  V   G+   +     + GRV++ LG+PIDG   +   
Sbjct: 69  NLEIGEIGVVVLGDFTNIAEGQTVRRTGQVLSVPVGDAYLGRVVDPLGRPIDGKGEIETT 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +   E+  +    M R+ V +  +TGI+ ID  TP+  GQR  +      GK      T+
Sbjct: 129 E-RRELELQAATVMQRKPVHEPLQTGIKAIDALTPIGRGQRQLIIGDRQTGKTAVCIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     + I   VG++G  +               + +V + + +    +
Sbjct: 188 INQKANWESGDPNKQVRCIYVAVGQKGSTIAGVRAALEEAGAMEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +T+ A + R ++      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYQGKHVLIVFDDLTKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  +    ++ +  I  +V SI DG + L   L  +G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSLTGLPIIETKANDVSAYIPTNVISITDGQVFLESDLFNQGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A +   KK+V SL   + ++   RD+     +   +D      + +
Sbjct: 368 AINVGISVSRVGGAAQTKAMKKVVGSLRVGLAQY---RDLEAFAAFGSDLDAASKAQLER 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   S    E+    I  
Sbjct: 425 GARLMELLKQGQYSPFPMEEEVVSIWA 451


>gi|332162910|ref|YP_004299487.1| ATPase, FliI/YscN family [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667140|gb|ADZ43784.1| ATPase, FliI/YscN family [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862346|emb|CBX72506.1| flagellum-specific ATP synthase [Yersinia enterocolitica W22703]
          Length = 445

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 149/414 (35%), Positives = 220/414 (53%), Gaps = 11/414 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           NL    G +  +  +      +   + +G     +      +  QV+  + ++ Y+ P  
Sbjct: 18  NLARVSGRLVRVNGILL--ESVGCRLAIGQRCRVESAEDVFIEAQVVGFDREVTYLMPFK 75

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
             + +  G  VF     G   I     W GRV+N LG+PIDG  SLG G+  ++      
Sbjct: 76  QPDGLMSGARVFPCELDGELLI--GDSWLGRVVNGLGEPIDGKGSLG-GETPLQQQLPQI 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + RQ V      G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 133 HPLQRQPVSTPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSMLLGMMTRYTQADVVVVG 192

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI        + KSVV+ A +DESP++R  A     ++A Y+  KG +V
Sbjct: 193 LIGERGREVKEFIEHSLQASGMAKSVVIAAPADESPLMRIKATELCHSVATYYRDKGKDV 252

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S    G +TA+ +
Sbjct: 253 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSHG-SGTMTAIYT 311

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +    ++ + 
Sbjct: 312 VLAEGDDQQDPIVDCARAVLDGHIVLSRQLAESGHYPAIDIGQSISRCMSQISPREQIQS 371

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              L      + + + +  +GGY  G D + D+AV   P I DFL+Q     S 
Sbjct: 372 ARLLKQCYADYMDIKPLIPLGGYVAGADPMADRAVQYYPAIIDFLRQEVDQPSP 425


>gi|34539221|gb|AAQ74494.1| F1-ATPase alpha subunit [Brodiaea californica]
          Length = 412

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|6561703|gb|AAF17047.1|AF197715_1 ATPase alpha subunit [Potamogeton berchtoldii]
          Length = 410

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 95/404 (23%), Positives = 170/404 (42%), Gaps = 22/404 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V          G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEFACG---VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKSLLGRVVDALGVPIDGRGSLSAHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNATAKENEKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCALGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLEL 355

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 AQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 396


>gi|146296975|ref|YP_001180746.1| F0F1 ATP synthase subunit beta [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|189081328|sp|A4XKX0|ATPB_CALS8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145410551|gb|ABP67555.1| ATP synthase F1 subcomplex beta subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 467

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 115/406 (28%), Positives = 191/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           GY+  I      V   S  +  + + +         + +V   +  D V    +G  + +
Sbjct: 6   GYVVQIIGPVVDVRFESGNLPAINNAIEIHFDGKTLVAEVAQHLGNDTVRCVALGSTDGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   +   G  ++       GR+ N LG+PID    +   D    I    P    +  
Sbjct: 66  RRGVKAIDTGGPIKVPVGRGTLGRIFNVLGQPIDNKGEVQATDY-WPIHRSAPSFEEQVP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGE
Sbjct: 125 AVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      ++K+V+V    +E P  R    LT +T+AEYF      +VLL 
Sbjct: 185 RTREGNDLWLEMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V ++ V
Sbjct: 245 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKRGSITSVQAIYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +   +  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 363 TVQQILQRYKELQDIIAILGMDELSEED-KLIVYRARKIQRFLSQP 407


>gi|117922563|ref|YP_871755.1| F0F1 ATP synthase subunit alpha [Shewanella sp. ANA-3]
 gi|158512327|sp|A0L2T0|ATPA_SHESA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|117614895|gb|ABK50349.1| ATP synthase F1, alpha subunit [Shewanella sp. ANA-3]
          Length = 513

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFAIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   VG++   +   +           ++VVVAT+ E+  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVEKFTKGAVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGVRVTELMKQKQ 435


>gi|323349841|gb|EGA84054.1| Atp1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 447

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 18/375 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG   +
Sbjct: 1   MALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPI 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  DAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
            T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+ E+ 
Sbjct: 120 DTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLKQSP 421
           + +   +   LKQ+ 
Sbjct: 357 LVRGERLTQLLKQNQ 371


>gi|148284339|ref|YP_001248429.1| H(+)-transporting two-sector ATPase F(1) alpha subunit [Orientia
           tsutsugamushi str. Boryong]
 gi|158514260|sp|A5CD07|ATPA_ORITB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146739778|emb|CAM79644.1| H(+)-transporting two-sector ATPase F(1) alpha subunit [Orientia
           tsutsugamushi str. Boryong]
          Length = 512

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 103/431 (23%), Positives = 184/431 (42%), Gaps = 23/431 (5%)

Query: 6   ETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  ED+ + + + + GY+ SI      V  LS     G+ +     ++   G V  
Sbjct: 10  EALKQQLEDFDELSELSEVGYVISIGDGIAKVYGLSNAYS-GEILQF---STGTKGIVFS 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  +++ +  +G G++I  G  V       ++       GRV++A+G PIDG        
Sbjct: 66  LKDNLIEVVVIGSGDQIKQGSQVKRTQTSLKVPTGKELLGRVVDAIGNPIDGKGEFI-NP 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             +++  K P  M R  V +   TGI+ ID   P+  GQR  +      GK+ +      
Sbjct: 125 TYLDVEVKAPSVMCRDSVNEPMYTGIKAIDALIPIGKGQRELIIGDRQTGKTAIAIDIIL 184

Query: 184 SDC----------FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +                I   +G++   V + ++          + VV++++ ++  L+ 
Sbjct: 185 NQKRFHLSDQEKEKVYCIYVAIGQKRSTVAQLVKKLQETGAMAYTTVVLSSASDAASLQY 244

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   I EYF     + L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 245 LAPYTGCAIGEYFRDNCMHALVIYDDLSKHAIAYRQISLLLRRPPAREAYPGDVFYLHSR 304

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER     K   +G++TA+  V     + +  I  ++ SI DG I L   L  +G  P 
Sbjct: 305 LLERAAKLNKAKGEGSLTALPIVETQNSDVSAYIPTNIISITDGQIFLESELFYKGIKPA 364

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K + SS+   + ++ E         +   +D    + +++ 
Sbjct: 365 LNVGISVSRVGAAAQIKAMKDIASSVKLELAQYHEME---AFSQFGADLDSSSMQLINRG 421

Query: 411 PIIYDFLKQSP 421
             + + LKQS 
Sbjct: 422 RRLSELLKQSQ 432


>gi|189501529|ref|YP_001957246.1| ATP synthase F1 subunit alpha [Candidatus Amoebophilus asiaticus
           5a2]
 gi|226739841|sp|B3EU98|ATPA_AMOA5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189496970|gb|ACE05517.1| ATP synthase F1, alpha subunit [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 532

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 168/442 (38%), Gaps = 36/442 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QLA   +   + + G +  +      +  L++ +  G+ V  +          + +  + 
Sbjct: 16  QLAHLKTDTELEEVGTVLQVGDGVAHIYGLTK-IQAGELVEFENGKK---AIALNLEENS 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V     G  E I  G       R   I       GRV+N LG+PIDG   +      M +
Sbjct: 72  VGAVIFGDAEGIGEGSTAKRTKRIASIHVGEGMIGRVVNTLGEPIDGKGPIKGELYEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD--- 185
             K P  + RQ V +  +TGI+ ID   P+  GQR  +      GK+TL      +    
Sbjct: 132 ERKAPGVLYRQPVAEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTTLAIDTILNQRTY 191

Query: 186 ----CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
                    I   +G++   +   +        ++ + +V A +  +  L+  AP T  T
Sbjct: 192 FEQGNPVYCIYVAIGQKASTIASVMASLEKYGAMEYTTIVAAPAATAASLQYFAPFTGAT 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEYFRDTGKPALVIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKI 311

Query: 301 E--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 NANDDIAQQMNDLPPSLEGKVKGGGSLTALPIIETQNGDVSAYIPTNVISITDGQIFLES 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +D
Sbjct: 372 ALFNAGIRPAINVGISVSRVGGAAQVKAMKKVAGTLKLDQAQFRELE---AFSKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPS 422
           +   + + +     + LKQ   
Sbjct: 429 VATQRTIDRGRKNQEILKQGLH 450


>gi|122919955|pdb|2DPY|A Chain A, Crystal Structure Of The Flagellar Type Iii Atpase Flii
 gi|122919956|pdb|2DPY|B Chain B, Crystal Structure Of The Flagellar Type Iii Atpase Flii
          Length = 438

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 235/428 (54%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + ++     +   +V+  N   +++ P+
Sbjct: 7   VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 64

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 65  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLE-TGA 123

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 124 LITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRA 183

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 184 DVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 243

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 244 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGS 303

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      +
Sbjct: 304 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALIT 363

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 364 EQHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERAD 423

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 424 WEDSLQAL 431


>gi|160875386|ref|YP_001554702.1| type III secretion system ATPase [Shewanella baltica OS195]
 gi|160860908|gb|ABX49442.1| ATPase, FliI/YscN family [Shewanella baltica OS195]
 gi|315267586|gb|ADT94439.1| ATPase, FliI/YscN family [Shewanella baltica OS678]
          Length = 443

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 161/411 (39%), Positives = 230/411 (55%), Gaps = 11/411 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  + +     T        G+  +     +    +V+ +  D   + P  +  
Sbjct: 29  VRYFGKVQEVGATLVRATL--PGAHQGELCLI---GNRLSAEVVAVKGDEALLSPFDVTA 83

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+LV   G   ++       GRV++ LG P+DG                 P  ++R
Sbjct: 84  GLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDGYG--LTATSLRPNQGSAPNPLSR 141

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q ++     GIR ID       GQRIG+FA +G GKSTLL M A     D ++++LVGER
Sbjct: 142 QLIDTVMPMGIRAIDSALACGIGQRIGIFAAAGGGKSTLLGMIAAHCQADVIVLTLVGER 201

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI  +   +   ++V+VVATSD  P+ R  A LTA TIAEYF  +G NVLL++D
Sbjct: 202 GREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLTATTIAEYFRDQGKNVLLMVD 261

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA S REIA  +GE PV+ GYP SVF  L  L+ER GP+ K  G+IT + +VLV+G
Sbjct: 262 SLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERAGPAAK--GSITGIYTVLVEG 319

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASVSR+ D+  S +++   + + 
Sbjct: 320 DDMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASVSRVMDQIVSPEQRCNAAKMR 379

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            L+  ++E + +  +G Y  G D   D+AV +   I  FL QS ++ S  +
Sbjct: 380 QLLALYQEVQLLIRVGEYVQGEDQETDEAVARHQDIQQFLCQSVNEFSPYE 430


>gi|90581149|ref|ZP_01236948.1| ATP synthase subunit A [Vibrio angustum S14]
 gi|90437670|gb|EAS62862.1| ATP synthase subunit A [Vibrio angustum S14]
          Length = 513

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 99/454 (21%), Positives = 189/454 (41%), Gaps = 32/454 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +N          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISALIKQRIENFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G    +  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --LFALALNLERDSVGAVVMGPYASLQEGMKVTGTGRILEVPVGPALLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETETFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     +   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKNSGIYSVYVAIGQKASTIANVVRKLEEHGALENTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSEHYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +D    K +     + + +KQ     +   VF++
Sbjct: 413 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 444


>gi|71280454|ref|YP_266828.1| ATP synthase F1 subunit alpha [Colwellia psychrerythraea 34H]
 gi|115312242|sp|Q48AW2|ATPA_COLP3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71146194|gb|AAZ26667.1| ATP synthase F1, alpha subunit [Colwellia psychrerythraea 34H]
          Length = 513

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 190/448 (42%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L ++  +           G I S+T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKNRIEQFNVVSEARNEGTIVSVTDGIIRINGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + ++ D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFAIALNLDRDSVGAVVMGPYADLAEGQKVKGTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  ++R+ V++  +TGI+ ID   P+  GQR  +     IGK
Sbjct: 117 GKGPI-ENDGFSPVEVIAPGVIDRKSVDEPVQTGIKSIDAMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           S +   ++  + +   K I   +G++   V   +           ++VVVA++ E+  L+
Sbjct: 176 SAIALDAIINQKNTGIKSIYVAIGQKASTVANVVRSLEEHGALSNTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYAGCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEAYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QSDLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYAE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +     + + +KQ      S
Sbjct: 413 LDDATRAQLEHGQRVTELMKQKQYSPLS 440


>gi|222824465|ref|YP_002576039.1| flagellum-specific ATP synthase FliI [Campylobacter lari RM2100]
 gi|222539686|gb|ACM64787.1| flagellum-specific ATP synthase FliI [Campylobacter lari RM2100]
          Length = 436

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 164/438 (37%), Positives = 241/438 (55%), Gaps = 13/438 (2%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLGQ 61
           LE L       S+NL    G I+ I+S    +  L     +GD +     + ++ + +  
Sbjct: 3   LEKLRSKI--ASQNLTSVFGQITKISSTSIEINGL--KTSIGDIIKIVSSEDESKEAMAM 58

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V+ ++ ++ Y+ P G  E   +GD  F      +I  S    GRV++   +P DG   + 
Sbjct: 59  VVEVDENLSYLSPFGFVEGFKIGDRAFINDAGMQIGVSDELLGRVVDPFMRPKDGKGPIE 118

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                M IM     AM R  +E+ F  G++ ID       GQ++G+FAGSG+GKSTL+ M
Sbjct: 119 ASKF-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGM 177

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             ++      +I+L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A++
Sbjct: 178 IVKNSKAPIKVIALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMS 237

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G  
Sbjct: 238 VAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKE 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E  KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR+
Sbjct: 298 EG-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRV 356

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S + K        L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q+
Sbjct: 357 MGDIISDEHKLAARKFKRLNSLLKENEVLLRIGAYQKGTDKELDQAIAKKDFMQQFLSQN 416

Query: 421 PSDLSSEDVFQEITKKLQ 438
           P +      F++    L+
Sbjct: 417 PEESFE---FEDTINMLK 431


>gi|163814611|ref|ZP_02206000.1| hypothetical protein COPEUT_00762 [Coprococcus eutactus ATCC 27759]
 gi|158450246|gb|EDP27241.1| hypothetical protein COPEUT_00762 [Coprococcus eutactus ATCC 27759]
          Length = 500

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 181/420 (43%), Gaps = 15/420 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L +  E+Y  +    + G +  +     TV  +      G+ VV +       G V  I 
Sbjct: 13  LKEEIENYDFDSRDKEVGKVIYVGDGIVTVYGI-DNAMYGEIVVFENG---VKGMVQDIR 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              +     G    I  G  V   G R  I     + GR+++ALG PIDG  S+   D  
Sbjct: 69  RTEIGCILFGRDTGIKEGTKVSRTGKRAGIPVGDAFVGRIVDALGAPIDGKGSIETTDYR 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I +  P  ++R+ V +  +TGI  ID   P+  GQR  +      GK+++      + 
Sbjct: 129 -PIENPAPSIVDRKSVNQPLQTGILSIDAMFPIGRGQRELIIGDRQTGKTSIAIDTILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   + + + +    D +  ++VV +T+ +S  L+ +AP +   IA
Sbjct: 188 KGKDVICVYVAIGQKASTIAKVVNNLNKYDAMDYTIVVASTASDSAPLQYIAPYSGTAIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER    + 
Sbjct: 248 EYFMHKGKDVLIVYDDLSKHAVAYRTLSLLLGRSPGREAYPGDVFYLHSRLLERSSKLKD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVSR+
Sbjct: 308 ELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK   S+   + ++ E     +   +   +D    + +     + + LKQ 
Sbjct: 368 GGAAQTKAMKKAAGSIRIDLAQYREME---VFTQFSSDLDENTKEQLQYGKGLMELLKQP 424


>gi|34539191|gb|AAQ74479.1| F1-ATPase alpha subunit [Arachnitis uniflora]
          Length = 407

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 95/399 (23%), Positives = 167/399 (41%), Gaps = 21/399 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTTIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGERGREVREF 205
             P+  GQR  +      GK      T+L+    +   +      +   +G++   V +F
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSSSESETLYCVYVAIGQKRSTVAQF 175

Query: 206 IEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A 
Sbjct: 176 VQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAV 235

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + R+++      P    +P  VF    RLLER      +   G+ TA+  +     + + 
Sbjct: 236 AYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSA 295

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 296 YIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQ 355

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + E   +     +   +D       ++   + +  KQ  
Sbjct: 356 YRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 391


>gi|34539307|gb|AAQ74537.1| F1-ATPase alpha subunit [Gyrocarpus americanus]
          Length = 416

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 169/411 (41%), Gaps = 22/411 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +          ++           +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 403


>gi|130076708|gb|ABO31974.1| ATPase alpha subunit [Ribes sp. Qiu 95022]
          Length = 426

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 90/412 (21%), Positives = 168/412 (40%), Gaps = 23/412 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  G
Sbjct: 1   RVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 56

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GR+++ALG PIDG  +L   +    +  K P  + R+ V +
Sbjct: 57  DLVKRTGSIVDVPAGKAMLGRMVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSVHE 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 116 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVY 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 176 VAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 236 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     
Sbjct: 296 LPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAM 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           K++  S    + ++ E   +  +  +   ++       ++   + +  KQ  
Sbjct: 356 KQVRGSSKLELAQYRE---VAALAQFGSDLNAATQALPNRGARLTEVPKQPQ 404


>gi|73538925|ref|YP_299292.1| ATPase FliI/YscN [Ralstonia eutropha JMP134]
 gi|72122262|gb|AAZ64448.1| ATPase FliI/YscN [Ralstonia eutropha JMP134]
          Length = 488

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 155/432 (35%), Positives = 227/432 (52%), Gaps = 25/432 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--------LGDFVVHQGKNSDNLGQVIRINLDIVYI 72
              G ++    +      L   V          G F  + G       +V+    D +Y+
Sbjct: 42  RSCGRLTRAAGLVLEAVGLRLPVGSDCLIELPAGQFSANLGGQRTAEAEVVGFGADRLYL 101

Query: 73  CPVGIGEEISLGDLVFHW---------------GRFRISPSACWCGRVINALGKPIDGDD 117
            P      +  G  V+                 G  R+       GRV++A G+P+DG  
Sbjct: 102 MPQSDVVGLLPGARVYPLEPSPQPEGASSPREPGSKRLPVGEGMLGRVVDAAGRPLDGLG 161

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +      + + ++    + R  ++    TG+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 162 PIRAA-QEVPLSAEQINPLMRAPIQTVLDTGVRAINGMLTVGRGQRMGLFAGSGVGKSVL 220

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D +++ L+GERGREV+EFIE  LG +   +SVVV A +D SP+LR     
Sbjct: 221 LGMMARYTSADVIVVGLIGERGREVKEFIEHILGPEGRARSVVVAAPADCSPLLRMQGAA 280

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +  +AEYF  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 281 YSTRLAEYFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPTLVER 340

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+RSLAE G YP +D  AS
Sbjct: 341 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDVEAS 400

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR        ++   V     L+ R++  RD+  +G Y PG D  LD A+   P +  F
Sbjct: 401 ISRAMTALIPPEQFSSVRRFKQLMSRYQRNRDLISVGAYVPGNDPELDLAIRLHPRMEAF 460

Query: 417 LKQSPSDLSSED 428
           L+Q   + +  D
Sbjct: 461 LQQDIHERAEYD 472


>gi|326571628|gb|EGE21643.1| F0F1 ATP synthase subunit alpha [Moraxella catarrhalis BC7]
          Length = 514

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +   ++L         G I S++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISNLIKQRIQDLDVSATAKTEGVIVSVSDGIVQIHGLEE-AMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G   +  GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGEYLSLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+ ++    P  + RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKLTDKVEKIAPGVIARQSVDEPVMTGYKAVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++ A+ +   K +   +G++   +   +           + VVVA++ E   L+ 
Sbjct: 178 ALAIDAIIAQKNSGIKCVYVAIGQKRSTIANVVRKLEETGALAYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNADYVEAFTGGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SNLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    + +     + + +KQ  
Sbjct: 415 DDATKQQLEHGVRVTELMKQKQ 436


>gi|319944165|ref|ZP_08018441.1| flagellar protein export ATPase FliI [Lautropia mirabilis ATCC
           51599]
 gi|319742460|gb|EFV94871.1| flagellar protein export ATPase FliI [Lautropia mirabilis ATCC
           51599]
          Length = 475

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 157/430 (36%), Positives = 232/430 (53%), Gaps = 26/430 (6%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVH-QGKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +  ++ +      ++  V  G   +  Q        +V+      V++ P G  
Sbjct: 24  VATEGRLVKVSGMLVEAAGIALPV--GALCLLKQPDGHAVEAEVVGFGHGHVFLMPSGDT 81

Query: 79  EEISLGDLVFHWGRFRISP---------------------SACWCGRVINALGKPIDGDD 117
             +S    V       ++P                          GRV++A G+P+D   
Sbjct: 82  SGLSPETRVCPLEPAVVTPTLARASHPWRRQSDRMRHLPIGHGLLGRVVDADGRPMDRFG 141

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   + S  I  +   AM+R+ + +   TG+R I+    +  GQRIG+FAG+G+GKS L
Sbjct: 142 PLRNVE-SRPIHGRAINAMDREPIREALDTGVRAINGLLTIGRGQRIGLFAGAGLGKSVL 200

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D +++ LVGERGRE++EF+ED LG+ +  ++V+V A SD  PI R     
Sbjct: 201 LGMMARYTNADVIVVGLVGERGREIKEFLEDILGEEDRHRAVIVAAPSDLPPIARMQGAH 260

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAEYF  +  NVLL++DS+TR+A + REIA + GE P  +GYP SVF+ LP LLER
Sbjct: 261 YATAIAEYFRDQDMNVLLLMDSLTRYAMAAREIALSIGESPATKGYPPSVFARLPALLER 320

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   + +G+ITA  +VL +GD+ NDP+ADS RS LDGHIVL+R LA+ G YP +D   S
Sbjct: 321 TGMGARGQGSITAFYTVLAEGDDQNDPVADSSRSFLDGHIVLSRELADAGHYPAIDIEKS 380

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+      A++++L   L  L   +  +R++  IG Y  G D  +D+A+  +P+I  F
Sbjct: 381 ISRVMSAVTPAEQQQLARQLKSLWSAYRRSRELITIGAYTEGSDARIDRAIELMPMIEAF 440

Query: 417 LKQSPSDLSS 426
           L Q   D SS
Sbjct: 441 LCQEVHDPSS 450


>gi|161485981|ref|NP_737923.2| F0F1 ATP synthase subunit alpha [Corynebacterium efficiens YS-314]
 gi|110832062|sp|Q8FQ22|ATPA_COREF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 546

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 185/436 (42%), Gaps = 27/436 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 65  VAQNLDTDSVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEKFLGRVINPLGQPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 VAEEDRV-LELQAPSVLERQPVEEPMATGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +    +        + + +V A + ++ 
Sbjct: 184 DTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQGALEYTTIVAAPASDAA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G+ITA+  +    ++ +  I  +V SI DG + L   L   G
Sbjct: 304 LHSRLLERAAKLSDDLGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNRG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 364 VRPAINVGISVSRVGGAAQTKGMKKVAGSLRLDLAAY---RDLEAFATFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   +   L QS +
Sbjct: 421 LERGQRLVQLLIQSEN 436


>gi|323334707|gb|EGA76080.1| Atp1p [Saccharomyces cerevisiae AWRI796]
          Length = 449

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 18/375 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +    V I   G    +  G+LV   G    +       GRV++ALG PIDG   +
Sbjct: 1   MALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPI 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                S     K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  DAAGRSRA-QVKAPGILPRRSVHEPVQTGLKAVDALVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228
            T+L+    ++  D       +   VG++   V + ++     D +K S++V AT+ E+ 
Sbjct: 120 DTILNQKRWNNGSDESKKLYCVYVAVGQKRSTVAQLVQTLEQHDAMKYSIIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP TA +I E+F   G + L++ D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYLAPFTAASIGEWFRDNGKHALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +++G+   TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKLSEKEGSGSLTALPVIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLKQSP 421
           + +   +   LKQ+ 
Sbjct: 357 LVRGERLTQLLKQNQ 371


>gi|260656825|gb|ACX47803.1| ATPase [Vibrio casei]
          Length = 479

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 97/432 (22%), Positives = 177/432 (40%), Gaps = 27/432 (6%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
               G I S++     +  L+  V  G+ +   G         + +  D V    +G   
Sbjct: 4   ARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYA 59

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   GR   +       GRV+N LG+PIDG   +    L+  +    P  ++R
Sbjct: 60  NLQEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDR 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVG 196
           + V++  +TG + +D   P+  GQR  +      GK+ +      +  D     I   +G
Sbjct: 119 KSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQRDSGIFSIYVAIG 178

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   +   +           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++
Sbjct: 179 QKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIV 238

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK----------- 304
            D +++ A + R+I+      P    +P  VF    RLLER     +             
Sbjct: 239 YDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHSRLLERASRVSEHYVENFTKGEVKG 298

Query: 305 --GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G++TA+  +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+  
Sbjct: 299 KTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGIRPAVDPGISVSRVGG 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A +   KKL   +   + ++ E   +     +   +D    + ++    + + +KQ   
Sbjct: 359 SAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSDLDATTKRQLNHGQKVTELMKQKQ- 414

Query: 423 DLSSEDVFQEIT 434
             +   VF +  
Sbjct: 415 -YAPFSVFDQAL 425


>gi|85059279|ref|YP_454981.1| type III secretion system ATPase [Sodalis glossinidius str.
           'morsitans']
 gi|84779799|dbj|BAE74576.1| putative type III secretion ATP synthase [Sodalis glossinidius str.
           'morsitans']
          Length = 442

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 161/440 (36%), Positives = 232/440 (52%), Gaps = 12/440 (2%)

Query: 2   QKNLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           Q+    LAQ      +        G +  I +             +G+      +    L
Sbjct: 6   QRLASMLAQHLTPVDEPPDGYRLTGALLHIGATLLRARL--PGAMMGEVCRLLPEGG--L 61

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+RI  D V + P G  E ++ G  V     R R    +   GRVI+ LG+ +D    
Sbjct: 62  AEVVRIEGDDVLLSPYGPTEGLTYGQRVQPLRHRQRAPVGSALLGRVIDGLGRALDDMP- 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                   E+ +  PP + RQR+ +   TGIR ID       GQRIG+FA +G GKSTLL
Sbjct: 121 -DPQGPWRELDAPPPPPLTRQRIARPLLTGIRAIDALLTCGEGQRIGIFAAAGGGKSTLL 179

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
           SM +     D  +++L+GERGREVREF+ +    +  ++ V +VATSD   + R  A   
Sbjct: 180 SMLSACPDCDVTVLALIGERGREVREFLEQTLDDEARQRCVTIVATSDRPALERVCALSL 239

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A T+AE F  +G  VLL+ DS+TR+A + REIA  +GE  V   YP +VF+ LPRLLER 
Sbjct: 240 ATTVAEAFRDQGLRVLLLADSLTRYARAGREIALAAGETCVGSSYPPAVFAALPRLLERA 299

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VLV+GD+ N+P+AD VRS+LDGHI+L+R LAE G +P +D LAS+
Sbjct: 300 GMGTV--GSITAFYTVLVEGDDINEPLADEVRSLLDGHIILSRRLAESGHFPAIDVLASL 357

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+           LV++L  L+  + +   +  +G Y+ G D + D+AV   P I  FL
Sbjct: 358 SRIMPSIVGERHIVLVATLRQLLSVYRDVELLVRVGEYQRGDDPLADRAVDAYPAICAFL 417

Query: 418 KQSPSDLSSEDVFQEITKKL 437
           +Q  +     D  Q+   +L
Sbjct: 418 QQRENTPCDIDDLQQQLMRL 437


>gi|34539311|gb|AAQ74539.1| F1-ATPase alpha subunit [Hanguana malayana]
          Length = 417

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGXNE-IQAGELVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPXSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKXAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|6561649|gb|AAF16993.1|AF197661_1 ATPase alpha subunit [Kadsura japonica]
          Length = 418

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 93/411 (22%), Positives = 169/411 (41%), Gaps = 23/411 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G    +  + V I   G    I  GD
Sbjct: 1   VVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G    +P      GRV++ALG PIDG  +L   +    +  K P  + RQ V + 
Sbjct: 57  LVKRTGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQQQ 403


>gi|284046068|ref|YP_003396408.1| ATP synthase F1 subunit alpha [Conexibacter woesei DSM 14684]
 gi|283950289|gb|ADB53033.1| ATP synthase F1, alpha subunit [Conexibacter woesei DSM 14684]
          Length = 538

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 104/449 (23%), Positives = 185/449 (41%), Gaps = 21/449 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL------VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           MQ   + +  + +   + L      + + G + S+      V  L   +   + +     
Sbjct: 1   MQIKPDEITSILKSRIEGLDSGSADLTEVGTVLSVADGIARVHGLENCMSF-EMLELP-- 57

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
             D  G  + +  D V +   G  +++  GD V   GR   I       GR+++ LG P+
Sbjct: 58  -HDVTGLALNLESDNVGVVLFGDWQKVVEGDTVKRTGRLLEIPVGDALLGRIVDPLGNPL 116

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   +   +       K P  + RQ V +  +TG++ +D   P+  GQR  +      G
Sbjct: 117 DGKGDVVASEYR-PAEFKAPGVVQRQPVTEPMQTGLKAVDAMIPIGRGQRELIIGDRQTG 175

Query: 174 KSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           K+ +   ++    D     +   +G+R   V    E    +     +++V A +DE+  +
Sbjct: 176 KTAIAIDTIINNKDSGVVSVYVAIGQRLATVVGIAETLAENGALDSTIIVAAAADEAAPI 235

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + MAP     +AEYF  KG + L + D +T+ A++ R+++      P    YP  VF   
Sbjct: 236 KFMAPYAGAAMAEYFLYKGQHALAVYDDLTKHAYAYRQMSLLLRRPPGREAYPGDVFYLH 295

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      E   G++TA+  +   G + +  I  +V SI DG I L   L   G  
Sbjct: 296 SRLLERSVKLNDELGGGSMTALPIIETQGGDVSAYIPTNVISITDGQIFLEPKLFFSGVR 355

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A     KK+   +   + +F E         +   +D    + + 
Sbjct: 356 PAINVGISVSRVGGNAQIKPMKKVAGKIKLELSQFRELE---AFAQFGSDLDADTQRTLA 412

Query: 409 QVPIIYDFLKQS-PSDLSSEDVFQEITKK 436
           +   +   L Q+  S L+ ED   ++   
Sbjct: 413 RGNRLVRTLNQNERSPLAVEDQVIQLYAA 441


>gi|269103805|ref|ZP_06156502.1| ATP synthase alpha chain [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163703|gb|EEZ42199.1| ATP synthase alpha chain [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 513

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 97/454 (21%), Positives = 188/454 (41%), Gaps = 32/454 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +      
Sbjct: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPNG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RFALALNLERDSVGAVVMGPYLDLQEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPINAKTFS-PVEVIAPGVIDRKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     +   +G++   +   +         + +++VVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKNSGIYSVYVAIGQKASTIANVVRKLEEHGALENTIIVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEHYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGIRPAVDPGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +D    K +     + + +KQ     +   VF++
Sbjct: 413 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 444


>gi|261340406|ref|ZP_05968264.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317498|gb|EFC56436.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus
           ATCC 35316]
          Length = 456

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 160/429 (37%), Positives = 239/429 (55%), Gaps = 19/429 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   V + ++   +     +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCVIERQDGPEMREVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              E I  G  V+           G+ ++       GRV++  GKP+DG  S    + + 
Sbjct: 83  EEVEGILPGARVYAKNMSGDGLQSGK-QLPLGPALLGRVLDGGGKPLDGLPSPDTTE-TG 140

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            ++++    + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR   
Sbjct: 141 ALITQPFNPLQRTAIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQ 200

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F
Sbjct: 201 ADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 260

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 261 RDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGITGGG 320

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      
Sbjct: 321 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALI 380

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + +
Sbjct: 381 TEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERA 440

Query: 426 S-EDVFQEI 433
             ED  Q +
Sbjct: 441 DWEDSLQAL 449


>gi|34539189|gb|AAQ74478.1| F1-ATPase alpha subunit [Aphyllanthes monspeliensis]
          Length = 407

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 161/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 7   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 63

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 64  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 122

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 123 LIIGDRQTGKTAIAIDTILNQKQMNERSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 182

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 183 ALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 243 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 303 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VA 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 360 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 390


>gi|20146568|gb|AAM12438.1| ATP synthase alpha subunit [Enkianthus campanulatus]
          Length = 399

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 23/407 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G  V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-IQAGKMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL        +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDH-XRRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLL+       +   G++T
Sbjct: 236 HALIIYDDLSKQAGAYRQMSLLLRRPPGREAFPGDVFYLHSRLLKTAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAHLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            K++  SL   + ++           +   +D      +++   + +
Sbjct: 356 MKQVCGSLKLELAQYRRG---AAFAQFGSDLDAATQALLNKGARLTE 399


>gi|62390098|ref|YP_225500.1| F0F1 ATP synthase subunit alpha [Corynebacterium glutamicum ATCC
           13032]
 gi|161486713|ref|NP_600435.2| F0F1 ATP synthase subunit alpha [Corynebacterium glutamicum ATCC
           13032]
 gi|81704079|sp|Q79VG7|ATPA_CORGL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|9757619|dbj|BAB08155.1| H+-ATPase alpha subunit [Corynebacterium glutamicum]
 gi|21323977|dbj|BAB98603.1| F0F1-type ATP synthase alpha subunit [Corynebacterium glutamicum
           ATCC 13032]
 gi|41325434|emb|CAF19914.1| PROBABLE ATP SYNTHASE ALPHA CHAIN PROTEIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 547

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 108/436 (24%), Positives = 184/436 (42%), Gaps = 27/436 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G + S       V+ L   V   + +   G     +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVSGL-PSVMANELLEFPGG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               +  D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 65  VAQNLEADRVGVVVLGNYELLKEGDQVRRTGDVLSIPVGEAFLGRVINPLGQPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 ASEEDRV-LELQAPTVLERQPVEEPLATGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +    +        + + +V A + ++ 
Sbjct: 184 DTILNQKANWETGDKTKQVRCIYVAIGQKGSTIAALRKTLEEQGALEYTTIVAAPASDAA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     +A+++  +G++VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALAQHWMYQGNHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G+ITA+  +    ++ +  I  +V SI DG + L   L   G
Sbjct: 304 LHSRLLERAAKLSDELGAGSITALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNRG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   +  F   RD+     +   +D      
Sbjct: 364 VRPAINVGVSVSRVGGAAQTKGMKKVAGSLRLDLAAF---RDLEAFATFASDLDAASKSQ 420

Query: 407 VHQVPIIYDFLKQSPS 422
           + +   +   L QS +
Sbjct: 421 LERGQRLVQLLIQSEN 436


>gi|312793601|ref|YP_004026524.1| ATP synthase F1 subunit beta [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180741|gb|ADQ40911.1| ATP synthase F1, beta subunit [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 467

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 192/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           GY+  I      +   ++ +  + + +         + +V   +  D V    +G  + +
Sbjct: 6   GYVVQIIGPVLDIRFENENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTDGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   +   G  ++       GR+ N LG+PID    +   D    I    P    +  
Sbjct: 66  RRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGE
Sbjct: 125 AVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      ++K+V+V    +E P  R    LT +T+AEYF      +VLL 
Sbjct: 185 RTREGNDLWLEMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V
Sbjct: 245 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +   +  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 363 TVQQILQRYKELQDIIAILGMDELSEED-KLIVYRARKIQRFLSQP 407


>gi|227824604|ref|ZP_03989436.1| ATP synthase F1 [Acidaminococcus sp. D21]
 gi|226905103|gb|EEH91021.1| ATP synthase F1 [Acidaminococcus sp. D21]
          Length = 622

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 98/404 (24%), Positives = 169/404 (41%), Gaps = 14/404 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + ++     T T L   +  G+ V     +    G V  +    V I  +G   ++  
Sbjct: 139 GIVKTVGDGICTATGLGGAMS-GELV---SLHDGIYGMVQNLWPQEVGIVLLGGASQVKE 194

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V   G+   I  S    GR+I+ LG P+DG  S+   D    I S  P    RQ V+
Sbjct: 195 GDTVRRTGKIMSIPVSEEMLGRIISPLGLPLDGRGSIKASDYR-PIESPAPGIAARQPVD 253

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGR 200
              +TG++ +D   P+  GQR  +    G GK+ +      +        I   +G++  
Sbjct: 254 VPLETGLKAVDALVPIGRGQRELIIGDRGTGKTAIAIDTILNQKGKNVICIYVAIGQKAS 313

Query: 201 EVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V      +        +++V AT+ ++  L+ +AP     + EYF  +G +VL++ D +
Sbjct: 314 SVARLSAAFEKYGASGYTLIVAATAADTAPLQYLAPYAGAAVGEYFMDQGKDVLIVYDDL 373

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R ++      P    YP  VF    RLLER     K    G++TA+  +    
Sbjct: 374 SKHAVAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERACRRNKAHGGGSMTALPIIETQA 433

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L   G  P ++   SVSR+   A +   K +  +L 
Sbjct: 434 GDVSGYIPTNVISITDGQIYLETDLFNSGVRPAINAGLSVSRVGGAAQTKAMKSVAGTLR 493

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E         +   +D      + +   + + LKQ+ 
Sbjct: 494 LTLAQYREL---AAFAQFGSDLDKATKMQLDRGARVTEMLKQAQ 534


>gi|224370784|ref|YP_002604948.1| FliI [Desulfobacterium autotrophicum HRM2]
 gi|223693501|gb|ACN16784.1| FliI [Desulfobacterium autotrophicum HRM2]
          Length = 451

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 149/405 (36%), Positives = 220/405 (54%), Gaps = 7/405 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQVIRINLDIVYICPVGIGE 79
              G I+ +  +      +   + +G     +   N +   +VI    D V + P G   
Sbjct: 25  RPEGRITKVVGLIAEGDGMG--LGIGSLCAIRNDYNREIKAEVIGFRDDKVLLMPYGDLR 82

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            IS G  +        ++    + GRVI+ +G P+DG   +        +       M R
Sbjct: 83  GISPGSRIIPLEDTPAVAVGDAFLGRVIDGMGAPLDGKGKIPFT-HKYPLYGNPINPMER 141

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           + +++    GI  I+   PL  GQR+ + AGSG+GKS L+ M  +    D +I+ L+GER
Sbjct: 142 KTIKEPLDVGICAINTMIPLGRGQRVAIMAGSGVGKSVLMGMMTKHTTADVIILGLIGER 201

Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREV++F+ D LG + +++SVVV ATSD  P++R      A T+AEYF  +G NVLLI+D
Sbjct: 202 GREVKDFVSDTLGKEGMERSVVVAATSDSPPLVRMRGAYLATTLAEYFRDQGKNVLLIMD 261

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           SITR+A S R++   +GE P +RGY  S F ++P LLER G  E   G+IT + +VLV+G
Sbjct: 262 SITRYAMSSRDVGLAAGEPPTSRGYTPSFFVQIPVLLERAGYIEG-GGSITGIYTVLVEG 320

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ NDP+ D+VRSI+DGHIVL+R LA +G YP +D LASVSR+       +  +L     
Sbjct: 321 DDMNDPVGDTVRSIVDGHIVLSRDLANKGHYPAIDVLASVSRVMRDVSQPEHMELRKRAV 380

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            +I       D+  IG Y  G D  +D+A   +P I  FL+Q   
Sbjct: 381 DVIAAHRGAEDMISIGAYVDGSDARIDEAKRLMPKIDGFLRQDMH 425


>gi|74317621|ref|YP_315361.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Thiobacillus denitrificans ATCC 25259]
 gi|74057116|gb|AAZ97556.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Thiobacillus denitrificans ATCC 25259]
          Length = 468

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 153/438 (34%), Positives = 230/438 (52%), Gaps = 29/438 (6%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81
            G I+ +  +      L   V  G        N  +L  +V+    + +++ P    E I
Sbjct: 30  SGRITRVAGLVMEAVGLKLPV--GSACTVPLPNGSHLEAEVVGFEGERLFLMPQSDVEGI 87

Query: 82  SLGDLVFHWGRF---------------------RISPSACWCGRVINALGKPIDGDDSLG 120
             G  VF                           +       GRV+++ G+P+DG  S+ 
Sbjct: 88  VPGARVFPVEVIPTLPGLGQVNHPRRRPSDRTRHLPVGEVLLGRVLDSNGRPLDGLGSVH 147

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
               +  + ++    ++R  + +    G+R I+    +  GQR+G+FAGSG+GKS LL M
Sbjct: 148 TS-ATAPLNNRAANPLSRAPISEILDVGVRAINSMLTIGRGQRMGLFAGSGVGKSVLLGM 206

Query: 181 FARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR    D +++ L+GERGREV+EFI +    + L ++VVV A +D  P++R      A 
Sbjct: 207 MARYTSADVIVVGLIGERGREVKEFIEQILGEEGLARAVVVAAPADTPPLMRLQGAAYAT 266

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE+F  +G NVLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G 
Sbjct: 267 AIAEHFRDEGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGN 326

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D   S+SR
Sbjct: 327 GKPGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRDLAESGHYPAIDIEQSISR 386

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 SA  +++   L  L  R+  +RD+  +G Y PG D +LD+A+     I  FL+Q
Sbjct: 387 AMHGITSAAHQQMARRLKKLYSRYARSRDLINVGAYAPGTDPLLDEAIRLQEGIEAFLQQ 446

Query: 420 SPSDLSSEDVFQEITKKL 437
           +  + +     +E    L
Sbjct: 447 NIPERAG---VEESLAAL 461


>gi|51103049|gb|AAT96195.1| HrcN [Pseudomonas viridiflava]
          Length = 450

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 156/436 (35%), Positives = 230/436 (52%), Gaps = 15/436 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLD 68
           Q A     + V   G +S++  +     C      +GD   V +   S  L +++    D
Sbjct: 13  QAARLSQYSAVRVSGRVSAVRGILL--ECKLPAAKVGDLCEVSKADGSLLLAEIVGFTPD 70

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDLS 125
              +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D  
Sbjct: 71  CTLLSALGAPDGIQVGATIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDALGAFAGPDDR 130

Query: 126 M---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +++   P   R R+ +   TG+R ID    L  GQR+G+FAG+G GK+TL++  A
Sbjct: 131 RTTLPVIADALPPTQRPRISRALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELA 190

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R  A  TA  I
Sbjct: 191 RNMDCDVIVFGLIGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAI 250

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  KG  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G SE
Sbjct: 251 AEAFREKGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSE 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+ 
Sbjct: 311 N--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRIL 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                 + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q  
Sbjct: 369 SNVTGREHQRANNRLRQLMAAYKQVEMLLRLGEYQAGSDPVTDCAVKLNEDINAFLRQ-- 426

Query: 422 SDLSSEDVFQEITKKL 437
            DL      +E    L
Sbjct: 427 -DLREPVPLEETLNAL 441


>gi|34539319|gb|AAQ74543.1| F1-ATPase alpha subunit [Helmholtzia glaberrima]
          Length = 414

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGASESDTLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|311898387|dbj|BAJ30795.1| putative ATP synthase subunit alpha [Kitasatospora setae KM-6054]
          Length = 524

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 93/447 (20%), Positives = 169/447 (37%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + LA   + Y  +   V + G ++        V  L   V   + +  +      LG  +
Sbjct: 13  DALADFVQSYQPDAASVEEVGTVTDAADGIAHVEGL-PSVMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLDTREIGVVILGEFGGIEEGQTVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGDIAST 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V++  +TGI+ ID  TP+  GQR  +      GK+ +     
Sbjct: 129 -GRRALELQAPGVMARKSVKQPLQTGIKAIDAMTPIGRGQRQLIIGDRQTGKTAVAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   VG++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDPEKQVRCIYVAVGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQEWMYDGKHVLIVFDDLSKQAEAYRSVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++T +  +    ++ +  I  +V SI DG   L   L   G  P
Sbjct: 308 RLLERCAKLNDALGGGSMTGLPIIETKANDVSAYIPTNVISITDGQCFLESDLFNAGIRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   SVSR+   A     + +   L   + ++ E       G     +D      + +
Sbjct: 368 AVNVGISVSRVGGSAQIKAMRSVAGRLRLDLAQYRELEAFAAFG---SDLDAASKAQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ        E+    I  
Sbjct: 425 GARMVELLKQGQYQPFPVEEQVVSIWA 451


>gi|226307394|ref|YP_002767354.1| ATP synthase alpha chain [Rhodococcus erythropolis PR4]
 gi|259585434|sp|C1A1Y0|ATPA_RHOE4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226186511|dbj|BAH34615.1| ATP synthase alpha chain [Rhodococcus erythropolis PR4]
          Length = 547

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 182/448 (40%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    ++Y+ +   +      G ++  +     V+ L       + +   G     +G
Sbjct: 9   DEIRSAIDNYTASYSPEASREEVGTVTDTSDGIAHVSGL-PSAMSNELLEFPGG---IVG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G  + I  G  V   G    +     + GRVI+ LG PIDG   +
Sbjct: 65  VALNLDATEIGAVILGDYQNIQEGQEVKRTGDVLSVPVGDAFLGRVIDPLGAPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              + +  +  +    + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 ESTE-NRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
             +L+  A  D  D       I   +G++G  +               + +V A + +S 
Sbjct: 184 DAILNQKANWDSGDVNKQVRCIYVAIGQKGSTIAGVKAALEEKGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIGQHWMYQGKHVLVVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERSAKLSDALGGGSLTALPIIETKANDVSAYIPTNVISITDGQVFLESDLFNKG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   + +F E         +   +D      
Sbjct: 364 VRPAINVGISVSRVGGAAQTKGMKKVSGSLRLELAQFRELE---AFSAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           + +   + + LKQ   S +  ED    I
Sbjct: 421 LERGARLVELLKQDQYSPIPVEDQIVSI 448


>gi|312875902|ref|ZP_07735892.1| ATP synthase F1, beta subunit [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311797383|gb|EFR13722.1| ATP synthase F1, beta subunit [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 467

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 191/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           GY+  I      +   ++ +  + + +         + +V   +  D V    +G  + +
Sbjct: 6   GYVVQIIGPVIDIRFENENLPAINNAIEIHFDGKKLVAEVAQHLGNDTVRCVALGSTDGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   +   G  ++       GR+ N LG+PID    +   D    I    P    +  
Sbjct: 66  RRGVKAIDTGGPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +     I + VGE
Sbjct: 125 AVEIFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      ++K+V+V    +E P  R    LT +T+AEYF       VLL 
Sbjct: 185 RTREGNDLWLEMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQEVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V
Sbjct: 245 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +   +  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 363 TVQQILQRYKELQDIIAILGMDELSEED-KLIVYRARKIQRFLSQP 407


>gi|28869165|ref|NP_791784.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967558|ref|ZP_03395706.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato T1]
 gi|302059426|ref|ZP_07250967.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato
           K40]
 gi|302134809|ref|ZP_07260799.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|28852405|gb|AAO55479.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927859|gb|EEB61406.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv.
           tomato T1]
 gi|331017001|gb|EGH97057.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 452

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 154/429 (35%), Positives = 234/429 (54%), Gaps = 15/429 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L   A+     ++ +V   G +  +  +      +     +G   +    +S    + 
Sbjct: 10  KRLAGYAESISLPAQPVV--EGRLLRMVGLTLEAEGM--RAAMGSRCMVINDDSHHPVEV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   V++ PVG    I+ G  V      GR          GRV++  G+P+DG
Sbjct: 66  EAEVMGFSGGKVFLMPVGSVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +       + R  + +    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 RSPI-KAEDWVPMDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +EK  G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  
Sbjct: 303 ERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+     S +          L  R+++TRD+  +G Y  G D   D A+   P++ 
Sbjct: 363 ASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLV 422

Query: 415 DFLKQSPSD 423
            + +Q+  +
Sbjct: 423 RYQRQALRE 431


>gi|304316372|ref|YP_003851517.1| ATP synthase F1 subunit beta [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777874|gb|ADL68433.1| ATP synthase F1, beta subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 461

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 116/405 (28%), Positives = 190/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           GYI+ +      +        + + +     + + + +V +   D  V    +   + + 
Sbjct: 4   GYITQVIGPVVDIRFDEDLPPINNAIKIPFNDDEIIVEVSQHTGDNTVRCVAMSSTDGLK 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G   F  G    +       GR+ N LGKP+DG   + K D  + I    P    +  V
Sbjct: 64  RGMECFDTGGPISVPVGEGTLGRMFNVLGKPVDGLGEV-KADKYVSIHRNAPSFEEQSPV 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +    S+   VGER
Sbjct: 123 TEVLETGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIEELIRNIATEHGGYSIFTGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  +   +      + K+  V    +E P  R    LT +T+AEYF  +   +VLL +
Sbjct: 183 TREGNDLWHEMKESGVIDKTAFVFGQMNEPPGARMRVGLTGLTMAEYFRDEKHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFIQAGSEVSALLGRMPSAVGYQPTLATELGALQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ +      +   +   
Sbjct: 301 ADDLTDPAPATTFTHLDATTVLSRSIVEMGIYPAVDPLDSTSRILEPSIVGEEHYNVARR 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ +++E +DI  I G     D      V++   I  FL Q 
Sbjct: 361 VQEILQKYKELQDIIAILGMDELSDED-KLTVYRARKIQRFLSQP 404


>gi|304398015|ref|ZP_07379890.1| ATP synthase F1, alpha subunit [Pantoea sp. aB]
 gi|308188717|ref|YP_003932848.1| membrane-bound ATP synthase, F1 sector, alpha- subunit [Pantoea
           vagans C9-1]
 gi|304354301|gb|EFM18673.1| ATP synthase F1, alpha subunit [Pantoea sp. aB]
 gi|308059227|gb|ADO11399.1| membrane-bound ATP synthase, F1 sector, alpha- subunit [Pantoea
           vagans C9-1]
          Length = 513

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLAD-VMQGEMIALPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P     + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLSPYAGCAMGEYFRDRGEDALIVYDDLSKQAIAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSADYVERFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ESNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLSHGQKVTELLKQKQ 435


>gi|12659375|gb|AAG60222.1| ATPase alpha subunit [Piper bicolor]
          Length = 412

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 92/410 (22%), Positives = 167/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 402


>gi|34539251|gb|AAQ74509.1| F1-ATPase alpha subunit [Chamaelirium luteum]
          Length = 417

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGXNE-IQAGEMVEFA---SXVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQIHSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETXLFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|283795520|ref|ZP_06344673.1| ATP synthase F1, alpha subunit [Clostridium sp. M62/1]
 gi|291077186|gb|EFE14550.1| ATP synthase F1, alpha subunit [Clostridium sp. M62/1]
          Length = 503

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 177/426 (41%), Gaps = 15/426 (3%)

Query: 8   LAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L +  ++Y       + G + S+      +  + ++   G+ V+         G V  I 
Sbjct: 13  LKEEIKNYDDRCREEETGTVISVGDGIARIYGM-EHAMYGEIVIFDNG---LKGMVQDIK 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D +     G    IS G        +  I     + GRV++ALG PIDG   + K D  
Sbjct: 69  EDSIGCILFGKDTGISEGSRAVRTRKKAGIPVGDAFLGRVVDALGAPIDGKGEI-KEDGY 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  + P  + R+ V +  +TGI  ID   P+  GQR  +      GK+++ +    + 
Sbjct: 128 RPVEQEAPGIVERKSVNRPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIATDAILNQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   VG++   V + +           S+V+ AT+ +   L+ +AP +   +A
Sbjct: 188 KGKDVICIYVAVGQKASTVAKLVSTLTEHGAMDYSIVMAATASDCSPLQYIAPYSGTALA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER      
Sbjct: 248 EYFMHKGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRLSD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SVSR+
Sbjct: 308 ELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFFAGQRPAVNVGLSVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK   S+   + ++ E     +   +   +D    + +     + + LKQ 
Sbjct: 368 GGAAQTKAMKKASGSIRIDLAQYREME---VFTQFSSDLDASTKEQLQYGKSLMELLKQP 424

Query: 421 PSDLSS 426
                S
Sbjct: 425 LGSPLS 430


>gi|331703819|ref|YP_004400506.1| ATP synthase subunit alpha [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328802374|emb|CBW54529.1| ATP synthase alpha chain [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 525

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 181/434 (41%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++  E + +   +Y+K +V  + G + S+      +  L   +  G+F+       +  
Sbjct: 5   IKEISEMIEKQIRNYNKEIVQTEQGTVVSVGDGIALIYGLDNAIM-GEFLKFPN---NVY 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDS 118
           G V+ +    V    +G    I  GD+V    +           GRVINAL KPID    
Sbjct: 61  GMVLNLEESAVGAVILGDETLIREGDIVKRTNKVVETPVGDALLGRVINALSKPIDNLGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        I       M R+ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 INFTKTK-PIERVATSVMARKSVSQPLETGILAIDSAIPIGKGQRELIIGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
             ++  + +   K I   +G++   + + +E          +VVV A + +   L+ ++P
Sbjct: 180 IDAIINQKNKNVKCIYVAIGQKDSTIVQVVEKLKKYGAMEYTVVVNAGASQPAPLQYLSP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              +TIAE +   G +VL++ D +++ A S R+++      P    YP  VF    RLLE
Sbjct: 240 YVGITIAEEWMENGSDVLIVYDDLSKHAVSYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +    G+ITA+  +     + +  I  +V SI DG I L+  L  +G  P VD 
Sbjct: 300 RAARVNENYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLSSELFNQGIRPAVDI 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E         +   +D      + Q   I
Sbjct: 360 GPSVSRVGSSAQIKSIKQVSGTLKLELAQYYELE---SFAKFGSDLDESTKATLDQGAKI 416

Query: 414 YDFLKQSPSDLSSE 427
              L Q   +   +
Sbjct: 417 IQMLIQKQHNPLEQ 430


>gi|153948731|ref|YP_001402772.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP
           31758]
 gi|152960226|gb|ABS47687.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Yersinia pseudotuberculosis IP 31758]
          Length = 445

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 162/411 (39%), Positives = 228/411 (55%), Gaps = 10/411 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I  I       +     V  G+    + +    L +V+ I  ++  + P    + 
Sbjct: 28  RYRGPIVEIGPTLLRASL--PNVAQGELCRIEPQG--MLAEVVSIEQEMALLSPFASSDG 83

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+   A   GR+++ LG PIDG   L       E+    P  + RQ
Sbjct: 84  LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPL--TGQWRELDCPPPSPLTRQ 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            VE+   TG+R ID       GQRIG+FA +G+GKSTLLSM       D ++++L+GERG
Sbjct: 142 PVEQMLTTGVRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERG 201

Query: 200 REVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G  VLL+ DS
Sbjct: 202 REVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REI   +GE P A  +P SVF+ LPRLLER G S+  +G+ITA  +VLV+GD
Sbjct: 262 LTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSD--RGSITAFYTVLVEGD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA +  +   L  
Sbjct: 320 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRR 379

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++  ++E   +  IG Y+ G DL  D+A+ + P I  FL+Q  S     D 
Sbjct: 380 MLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRDPDT 430


>gi|260946940|ref|XP_002617767.1| ATP synthase alpha chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
 gi|238847639|gb|EEQ37103.1| ATP synthase alpha chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
          Length = 447

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 164/375 (43%), Gaps = 18/375 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +    V I   G    +   + V   G+   +       GRV++ LG PIDG   L
Sbjct: 1   MALNLEAGQVGIVLFGSDALVKESEPVKRTGKIVDVPVGPELLGRVVDGLGNPIDGKGPL 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                + +   K P  + R+ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 61  NAS-ATAKAEVKAPGILPRRSVHEPMQTGLKSVDALVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESP 228
            T+L+    +D  D       +   VG++   V + ++     D LK S++V AT+ E+ 
Sbjct: 120 DTILNQKRWNDGNDEKKKLYCVYVAVGQKRSTVAQLVKTLEANDALKYSIIVAATASEAA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP TA +I E+F   G + L+I D +++ A + R+++      P    YP  VF 
Sbjct: 180 PLQYLAPFTACSIGEWFRDNGRHALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFY 239

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     +  G  ++TA+  +   G + +  I  +V SI DG I L   L  +G
Sbjct: 240 LHSRLLERAAKMSEANGAGSLTALPIIETQGGDVSAYIPTNVISITDGQIFLEAELFYKG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    + 
Sbjct: 300 IRPAINVGLSVSRVGSAAQVKAMKQVAGSLKLFLAQYRE---VAAFAQFGSDLDASTKQT 356

Query: 407 VHQVPIIYDFLKQSP 421
           + +   +   LKQ  
Sbjct: 357 LARGERLTQLLKQKQ 371


>gi|226324287|ref|ZP_03799805.1| hypothetical protein COPCOM_02067 [Coprococcus comes ATCC 27758]
 gi|225206735|gb|EEG89089.1| hypothetical protein COPCOM_02067 [Coprococcus comes ATCC 27758]
          Length = 505

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 183/426 (42%), Gaps = 20/426 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  +E   Q+++D       + G + S+      +  + ++   G+ V  +       G
Sbjct: 16  LKNEIENFDQISKD------SEVGTVVSVGDGIANIYGI-EHAMYGEIVTFENG---LKG 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V  I  D +     G   EI  G  V    +   +     + GRV+NALG PIDG   +
Sbjct: 66  MVQDIQKDTIGCILFGSDVEIKEGTKVMRTKKKAGVPVGDKFIGRVVNALGAPIDGAGEI 125

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    I ++ P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++ +
Sbjct: 126 EAEDYR-PIENEAPGIVDRKSVSVPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIAT 184

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   + + +  +  G  +  ++VV +T+ +   L+ +AP 
Sbjct: 185 DTILNQKGKDVICIYVAIGQKASTIAKVVNTFKNGGAMDYTIVVASTASDCAPLQYIAPY 244

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAE+F  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER
Sbjct: 245 AGTAIAEHFMHKGKDVLIVYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLER 304

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+  
Sbjct: 305 SSRLSDEMGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVG 364

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK   S+   + ++ E     +   +   +D    + +     + 
Sbjct: 365 LSVSRVGGAAQTKAMKKAAGSIRIDLAQYREME---VFTQFSSDLDAATKEQLEYGSGLM 421

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 422 ELLKQP 427


>gi|20146636|gb|AAM12472.1| ATP synthase alpha subunit [Napoleona imperialis]
          Length = 388

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 91/396 (22%), Positives = 163/396 (41%), Gaps = 23/396 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTTIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV+NALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVNALGVPIDGRGSLSDHE-RRRVXVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESDTLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N  + S++V  T+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQILSEANALEYSILVTTTASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           + ++ E   +     +   +D      +++   + +
Sbjct: 356 LAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 388


>gi|34539205|gb|AAQ74486.1| F1-ATPase alpha subunit [Astelia sp. Grimes 3525]
          Length = 418

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPVGKAMLGRVVDTLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|125975091|ref|YP_001039001.1| F0F1 ATP synthase subunit beta [Clostridium thermocellum ATCC
           27405]
 gi|256003255|ref|ZP_05428247.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 2360]
 gi|171769992|sp|A3DIM9|ATPB_CLOTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|125715316|gb|ABN53808.1| ATP synthase F1 subcomplex beta subunit [Clostridium thermocellum
           ATCC 27405]
 gi|255992946|gb|EEU03036.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 2360]
 gi|316939256|gb|ADU73290.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 1313]
          Length = 464

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 117/406 (28%), Positives = 195/406 (48%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINL-DIVYICPVGIGEEI 81
           G +  I      +     +   + + +    +  D + +V++    D V    +   + +
Sbjct: 7   GTVVQIIGPVIDIRFERGKLPSIYNAIKINSEGIDIVAEVMQYTGNDTVRCVSMNSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G   ++       GRV N LG+PIDG   + K    + I  + P    ++ 
Sbjct: 67  KRGMKAVDTGEPIKVPVGKEVLGRVFNVLGEPIDGKGDV-KATTYLPIHREAPGLDEQKP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 126 VTEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +      ++K+ +V    +E P  R    LT +T+AEYF  + G +VLL 
Sbjct: 186 RSREGNDLWNEMNESGVIEKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 246 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ D+    DE   +  
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRHIVEQGIYPAVDPLDSTSRVLDRRIVGDEHYTVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 KVQEILQRYKELQDIIAILGLDELSEED-KLIVFRARKIQRFLSQP 408


>gi|300115594|ref|YP_003762169.1| ATP synthase F1 subunit alpha [Nitrosococcus watsonii C-113]
 gi|299541531|gb|ADJ29848.1| ATP synthase F1, alpha subunit [Nitrosococcus watsonii C-113]
          Length = 515

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 103/441 (23%), Positives = 185/441 (41%), Gaps = 30/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +Q N   +++L     +           G + S+T     +  L+  V  G+ +   G  
Sbjct: 3   LQLNAAEISELIRKRIEGFEADTEARTEGTVVSLTDGIVRIHGLTD-VMFGEMIEFPG-- 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  + IS G+ V   GR   +       GRV+++LG PID
Sbjct: 60  -NTYGLAMNLERDSVGAVILGPYQHISEGNRVKCTGRILEVPVGEALLGRVVDSLGIPID 118

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +   +  I    P  + RQ V +  +TG++ ID   P+  GQR  +      GK
Sbjct: 119 GGGPV-EAQATSPIEKVAPGVITRQSVSQPVQTGLKSIDSMVPVGRGQRELIIGDRQTGK 177

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   V   +         + ++VV A++ ES  L+
Sbjct: 178 TAVAVDAIINQKGTGIKCIYVAIGQKASSVAGVVRKLEEHGALEHTIVVAASASESAALQ 237

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +T+ A + R+++      P    +P  VF    
Sbjct: 238 FIAPYAGCAMGEYFRDRGEDALIIYDDLTKQAWAYRQVSLLLRRPPGREAFPGDVFYLHS 297

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  I  +V SI DG I L
Sbjct: 298 RLLERSARVNAEHVEKLTEGKVKGKTGSLTALPIIETQAGDVSAFIPTNVISITDGQIFL 357

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 358 ETDLFNAGIRPAINAGLSVSRVGGAAQTKIIKKLGGGVRLDLAQYRE---LAAFAQFASD 414

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
           +D    K + +   + + +KQ
Sbjct: 415 LDEATRKQLERGQRVTELMKQ 435


>gi|259909714|ref|YP_002650070.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation
           pathway-hrcN protein [Erwinia pyrifoliae Ep1/96]
 gi|224965336|emb|CAX56868.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation
           pathway-hrcN protein [Erwinia pyrifoliae Ep1/96]
 gi|283479800|emb|CAY75716.1| ATP synthase in type III secretion system [Erwinia pyrifoliae DSM
           12163]
          Length = 454

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 153/450 (34%), Positives = 242/450 (53%), Gaps = 20/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GK 54
           M    + L Q A+   + L     V + G ++ I+ +   + C+     +GD    Q   
Sbjct: 3   MSALQQRLTQWADQQQRRLERYSPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSD 60

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
               L +++  + + + +  +G  + IS G  +        I  S    G V++  G+ +
Sbjct: 61  GGSVLSEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRAL 120

Query: 114 DGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +          G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FA
Sbjct: 121 EPGGRSAFAEPGSQVRAVPVLNDAPPPTERPRIATPLPTGLRAIDGLLTIGNGQRVGIFA 180

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   ++V++ ATSD S
Sbjct: 181 GAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRS 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV+
Sbjct: 241 SMERARAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVY 300

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   
Sbjct: 301 TLLPRLVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNH 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR                L  L+  +++   +  +G Y+PG D + D AV
Sbjct: 359 YPAIDVLASLSRTMSNVVEPHHMMHAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAV 418

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   II  FL+QS   + + D F++    L
Sbjct: 419 NANDIINQFLRQS---MRAPDPFEQTQYHL 445


>gi|238917404|ref|YP_002930921.1| ATP synthase [Eubacterium eligens ATCC 27750]
 gi|238872764|gb|ACR72474.1| ATP synthase [Eubacterium eligens ATCC 27750]
          Length = 501

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 99/407 (24%), Positives = 169/407 (41%), Gaps = 14/407 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
             + G +  +     TV  +  +   G+ VV         G V  I  + + +   G   
Sbjct: 29  SRETGNVIWVGDGIATVYGI-DHAMYGEIVVFDNG---VKGMVQDIRENEIGVILFGRDT 84

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V    +   I   + + GRVINALG+PIDG   + + D    I    P  ++R
Sbjct: 85  GIKEGTKVVRTKKKAGIPVGSAFVGRVINALGEPIDGKGDIKEEDYR-PIEEDAPGIVDR 143

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           + V    +TGI  ID   P+  GQR  +      GK+++ +    +        +   +G
Sbjct: 144 KSVSTPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIATDTIINQKGKGVICVYVAIG 203

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           S+VV +T+ +   L+ +AP     +AE+F  +G +VL++
Sbjct: 204 QKASTVAKVVSTLTKHGAMDYSIVVSSTASDPASLQYIAPYAGTAMAEHFMHQGKDVLIV 263

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R ++      P    YP  VF    RLLER          G+ITA+  +
Sbjct: 264 YDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRLSDALGGGSITALPII 323

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L  +L   G  P V+   SVSR+   A +   KK  
Sbjct: 324 ETQAGDVSAYIPTNVISITDGQIFLETNLFNSGMRPAVNVGLSVSRVGGAAQTKAMKKAS 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            S+   + ++ E     +   +   +D      +     + + LKQ 
Sbjct: 384 GSIRIDLAQYREME---VFTQFASDLDDATKAQLQHGKALMELLKQP 427


>gi|27461619|gb|AAM95226.1| ATPase F1 alpha subunit [Xyris bicephala]
          Length = 415

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 163/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLXE-IQAGEMVEFA---SGVKGIALNLENENVXIVVFGNDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTILNQKQMFSRGPKESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNLKKS-VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  +  ++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILTEANAMEYGILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|86145158|ref|ZP_01063489.1| ATP synthase subunit A [Vibrio sp. MED222]
 gi|85836735|gb|EAQ54855.1| ATP synthase subunit A [Vibrio sp. MED222]
          Length = 513

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +D      V       G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLNSNEISDLIKDRISKFNVSTEARNEGTIVSVRDGIITINGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + ++   V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --KYALALNLDTHSVGAVVMGPYTDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVS-CDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + L   ++  + D   K +   +G++   +   +      D LK ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEDHDALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG + L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A     KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D +  K +     + + +KQ      S
Sbjct: 413 LDDMTRKQLDHGERVTELMKQKQYSPMS 440


>gi|330808218|ref|YP_004352680.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376326|gb|AEA67676.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 452

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 157/427 (36%), Positives = 237/427 (55%), Gaps = 11/427 (2%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L + A+ +E   + ++   G +  +  +      L     +G   +    +S      
Sbjct: 10  KRLGSYAEASELAGQPIL--EGRLLRMVGLTLEAEGL--RAAMGSRCMVINDDSYHPVQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117
             +V+  +   V++ PVG    I+ G  V       R+       GRV++  G+ +DG  
Sbjct: 66  EAEVMGFSGSKVFLMPVGSVAGIAPGARVVPLADNGRLPMGMSMLGRVLDGAGRALDGKG 125

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +  + +       + R  +      GIR I+    +  GQR+G+FAG+G+GKS L
Sbjct: 126 GM-KAEDWVPMDGPTINPLKRDPISVPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVL 184

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +
Sbjct: 185 LGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAM 244

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER
Sbjct: 245 YCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVER 304

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G +EK  G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS
Sbjct: 305 AGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEAS 364

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     SA+  K          R++++RD+  +G Y PG D   D A+   P +  +
Sbjct: 365 ISRVMPSVISAEHMKRAQQFKQYWSRYQQSRDLISVGAYVPGGDRETDTAISLYPAMAVY 424

Query: 417 LKQSPSD 423
           L+QS +D
Sbjct: 425 LRQSLND 431


>gi|218676675|ref|YP_002395494.1| ATP synthase subunit A [Vibrio splendidus LGP32]
 gi|218324943|emb|CAV26762.1| ATP synthase subunit A [Vibrio splendidus LGP32]
          Length = 513

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +D      V       G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLNSNEISDLIKDRISKFNVSTEARNEGTIVSVRDGIITINGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + ++   V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --KYALALNLDTHSVGAVVMGPYTDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVS-CDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + L   ++  + D   K +   +G++   +   +      D LK ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEDHDALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG + L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A     KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D +  K +     + + +KQ      S
Sbjct: 413 LDDMTRKQLDHGERVTELMKQKQYSPMS 440


>gi|146298820|ref|YP_001193411.1| F0F1 ATP synthase subunit alpha [Flavobacterium johnsoniae UW101]
 gi|189081300|sp|A5FL34|ATPA_FLAJ1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|146153238|gb|ABQ04092.1| ATP synthase F1, alpha subunit [Flavobacterium johnsoniae UW101]
          Length = 525

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 104/453 (22%), Positives = 169/453 (37%), Gaps = 37/453 (8%)

Query: 6   ETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  E +     + + G +  +      V  LS  V  G+ V          G V+ 
Sbjct: 11  AILRKQVEGFESGATLEEVGTVLQVGDGIARVYGLS-NVQYGELVEFDNGME---GIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  G       R   +       GRV+N LG PIDG   +G   
Sbjct: 67  LEEDNVGVVLLGPSTGIKEGSTAKRTQRIASLKVGEQMVGRVVNTLGFPIDGKGPIGGDL 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  V      GKST+      
Sbjct: 127 YEMPLERKAPGVIFRQPVTEPLQTGVKAVDAMIPVGRGQRELVIGDRQTGKSTVCIDTIL 186

Query: 184 SDCFDK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +             I   +G++   V    +          +V+V A + +   ++  AP
Sbjct: 187 NQKEFYDAGKPVFCIYVAIGQKASTVAGIAKMLEEKGAMAYTVIVAANASDPAPMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 247 FAGAAIGEYFRDSGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RACKVIADDGIAKNMNDLPESIKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L     +F E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQFRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +D +    + +     + LKQ  +D  + +
Sbjct: 424 GSDLDSVTLNVIEKGKRNVEILKQGLNDPYTVE 456


>gi|51102994|gb|AAT96141.1| HrcN [Pseudomonas viridiflava]
          Length = 450

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 155/436 (35%), Positives = 230/436 (52%), Gaps = 15/436 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLD 68
           Q A     + V   G +S++  +     C      +GD   V +   S  L +++    D
Sbjct: 13  QAARLSQYSAVRVSGRVSAVRGILL--ECKLPAAKVGDLCEVSKADGSLLLAEIVGFTPD 70

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDLS 125
              +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D  
Sbjct: 71  CTLLSALGAPDGIQVGATIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDALGAFAGPDDR 130

Query: 126 M---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +++   P   R R+ +   TG+R ID    L  GQR+G+FAG+G GK+TL++  A
Sbjct: 131 RTTLPVIADALPPTQRPRISRALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELA 190

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R  A  TA  I
Sbjct: 191 RNMDCDVIVFGLIGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAI 250

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  +G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G SE
Sbjct: 251 AEAFRERGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSE 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+ 
Sbjct: 311 N--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRIL 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                 + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q  
Sbjct: 369 SNVTGREHQRANNRLRQLMAAYKQVEMLLRLGEYQAGSDPVTDCAVKLNEDINAFLRQ-- 426

Query: 422 SDLSSEDVFQEITKKL 437
            DL      +E    L
Sbjct: 427 -DLREPVPLEETLNAL 441


>gi|150026486|ref|YP_001297312.1| F0F1 ATP synthase subunit alpha [Flavobacterium psychrophilum
           JIP02/86]
 gi|172048616|sp|A6H2D7|ATPA_FLAPJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71905638|gb|AAZ52796.1| F0F1-type ATP synthase alpha subunit [Flavobacterium psychrophilum]
 gi|149773027|emb|CAL44511.1| ATP synthase alpha subunit [Flavobacterium psychrophilum JIP02/86]
          Length = 525

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 103/453 (22%), Positives = 169/453 (37%), Gaps = 37/453 (8%)

Query: 6   ETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L +  E +     + + G +  +      +  LS  V  G+ V          G V+ 
Sbjct: 11  AILKKQVEGFESGATLEEVGSVLQVGDGIARIYGLS-NVQYGELVEFDNG---LEGIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I  G       R   +       GRV+N LG PIDG   +G   
Sbjct: 67  LEEDNVGVVLLGASTGIKEGSTAKRTQRIASLKVGEQMVGRVVNTLGFPIDGKGPIGGDL 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TGI+ +D   P+  GQR  V      GKST+      
Sbjct: 127 YEMPLERKAPGVIFRQPVTEPLQTGIKAVDAMIPVGRGQRELVIGDRQTGKSTVCIDTIL 186

Query: 184 SDCFDK-------VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +             I   +G++   V    +          +V+V A + +   ++  AP
Sbjct: 187 NQKEFYDAGKPVFCIYVAIGQKASTVAGIAKMLEEKGAMAYTVIVAANASDPAPMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           +    I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLE
Sbjct: 247 MAGAAIGEYFRDSGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLE 306

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RACKVIADDDIAKNMNDLPDSLKSIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L     +F E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVAGTLKLDQAQFRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +D +    + +     + LKQ  +   + +
Sbjct: 424 GSDLDAVTLNVIEKGKRNVEILKQGLNSPYTVE 456


>gi|255281449|ref|ZP_05346004.1| ATP synthase F1, alpha subunit [Bryantella formatexigens DSM 14469]
 gi|255267937|gb|EET61142.1| ATP synthase F1, alpha subunit [Bryantella formatexigens DSM 14469]
          Length = 591

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 116/434 (26%), Positives = 191/434 (44%), Gaps = 20/434 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++ NL+ L     +       +GG+I  +      V  +SQ V  G+ V+ +       G
Sbjct: 98  LKSNLDGLNGEIAE------TEGGHILRLHDGIAAVDGMSQAV-YGEIVLFENGTK---G 147

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            V  I+   V    +G  +E+  GD V   G R  I       GRV++ALG PIDG    
Sbjct: 148 LVQNIDETEVLCIVLGDEQELEEGDRVIRTGKRAGIPVGKEILGRVVDALGAPIDGAGPF 207

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
            + D  + I  K P  + RQ V    +TGI  ID   P+  GQR  +      GK+   +
Sbjct: 208 REEDWYL-IERKAPGVLERQPVNVPMQTGILAIDAMFPIGRGQRELIIGDRQTGKTSIAI 266

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     +   +G++   V + + +    +     VVV A++ E   L+ +AP 
Sbjct: 267 DTIINQKDKDVICVYVAIGQKASTVAQIVSNLKKHHAMDYCVVVSASASEPAALQYLAPY 326

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           +   IAEYF  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER
Sbjct: 327 SGTAIAEYFMDQGKDVLIIYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLER 386

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
               ++    G+ITA+  V   G + +  I  ++ SI DG I L   L   G  P V+  
Sbjct: 387 SSRMDEAHGGGSITALPIVETQGGDVSAYIPTNIISITDGQIFLESDLFFAGNRPAVNVG 446

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK+  +L   + +++E         +   +D    + +     + 
Sbjct: 447 LSVSRVGGAAQTKALKKVSGTLRIDLAQYKEME---SFAQFSSELDSETKEQLAYGEQLM 503

Query: 415 DFLKQSPSDLSSED 428
           + LKQ   +  S +
Sbjct: 504 ELLKQPLYEPKSME 517


>gi|92114081|ref|YP_574009.1| ATPase FliI/YscN [Chromohalobacter salexigens DSM 3043]
 gi|91797171|gb|ABE59310.1| ATPase FliI/YscN [Chromohalobacter salexigens DSM 3043]
          Length = 468

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 158/448 (35%), Positives = 232/448 (51%), Gaps = 16/448 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLS---QYVCLGDFVVHQGKNSDN 58
           Q+ L  +++  E          G I   T +    T L       CL +   H G     
Sbjct: 20  QRALGKVSERIEGLESR--RPHGKIVRATGLVLEATGLRLPLGSACLVELAQH-GHVGYA 76

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI--------SPSACWCGRVINALG 110
             +V+    D +++ P+G    +  G  V   G  R                GRV++  G
Sbjct: 77  EAEVVGFAGDRLFLMPLGDTHGLVPGARVLTLGNNRQDAASARRFPLGDALLGRVLDGNG 136

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+DG  +L        + +     ++R  ++     GIR I+    +  GQR+G+FAGS
Sbjct: 137 RPLDGKGALD-HASHAPLSTAPINPLDRAPIDNVIDVGIRAINGLLSVGRGQRMGLFAGS 195

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
           G+GKS LL M +R    D +++ L+GERGREV++FIE+ LG +  +++VVV A +D SP+
Sbjct: 196 GVGKSVLLGMMSRYTQADVIVVGLIGERGREVKDFIENILGPEGRERAVVVAAPADVSPL 255

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
            R      A  IAE F  +G NVLLI+DS+TR+A ++REIA   GE P  +GYP SVF+ 
Sbjct: 256 QRLQGASYATRIAEGFRDEGRNVLLIMDSLTRYAMAMREIALAVGEPPATKGYPPSVFAR 315

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R LAE G YP
Sbjct: 316 LPGLVERAGNGRPGGGSITAFYTVLTEGDDQQDPIADAARAILDGHVVLSRQLAESGHYP 375

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D  AS+SR        D ++       L  R++  RD+  +G Y  G D  LD+AV  
Sbjct: 376 AIDIEASISRAMTAIVEGDHQRRAQRFKQLFSRYQRNRDLISVGAYAAGHDPQLDRAVAL 435

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            P +  FL+Q   + +  D   +    L
Sbjct: 436 YPRLEAFLQQGIDERADVDSTLDALASL 463


>gi|320107025|ref|YP_004182615.1| FliI/YscN family ATPase [Terriglobus saanensis SP1PR4]
 gi|319925546|gb|ADV82621.1| ATPase, FliI/YscN family [Terriglobus saanensis SP1PR4]
          Length = 434

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 236/422 (55%), Gaps = 8/422 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
               G +  + +   T++       +G+   +   K   +  +VI      +   P+   
Sbjct: 16  ARWYGRV--VEATAQTISSDGPSCSVGEACEIVDSKGGYHAAEVIGFRGSHLISMPLSSS 73

Query: 79  EEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             I  GD V   G    +       GRV++A G+PID   +  + +    +   +P AM+
Sbjct: 74  RGIRFGDRVMTTGEVPSLGVGEDCLGRVLDARGRPIDERQA-PRVETFRPLDGDLPMAMH 132

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  ++    TG+RV+D    +  GQR+G+F GSG+GKSTL+ M  R+   D  I+ LVGE
Sbjct: 133 RVPIQTPLATGVRVLDAMMTVGRGQRVGIFGGSGVGKSTLIGMMTRNTSADLTIVGLVGE 192

Query: 198 RGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREF+ED LG+   ++SV VV+TSDESP++R  A L A T+AE +++KG +VLL+L
Sbjct: 193 RGREVREFLEDSLGEKGRRRSVTVVSTSDESPLMRMRAALAATTLAESYAAKGKHVLLVL 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR+A + RE+   +GE    +GY  SVF+++ RL+ER G      G++TA  +VL++
Sbjct: 253 DSLTRYAMAAREVGLAAGEPAATKGYTPSVFAKMARLVERAGNFGT--GSMTAFYTVLME 310

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+  DP+ D+ RS+LDGHIVL+R +A  G YPPV  L S+SRL     SA+ ++  + +
Sbjct: 311 GDDQQDPLVDAARSLLDGHIVLSREMASAGIYPPVHVLDSLSRLMPAVISAEHRQDAAKI 370

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
              +  +  + D+  +G Y+ G+D  LD A+   P I  F +Q+  + +           
Sbjct: 371 RRTMATYARSEDMVRLGMYKSGMDAELDHAIRMHPRIQTFFQQTSEERADYASTLAALHG 430

Query: 437 LQ 438
           L+
Sbjct: 431 LE 432


>gi|288870217|ref|ZP_06113354.2| ATP synthase F1, alpha subunit [Clostridium hathewayi DSM 13479]
 gi|288867996|gb|EFD00295.1| ATP synthase F1, alpha subunit [Clostridium hathewayi DSM 13479]
          Length = 508

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 109/423 (25%), Positives = 177/423 (41%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L    EDY  +    + G +  I     T+  +  +   G+ V+         G V 
Sbjct: 13  ISILRSEIEDYDVHARDQEVGTVIGIGDGIATIYGI-DHAMYGEIVIFDNG---VKGMVQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  D +     G  +EI  G  V     R  I     + GRV+NALG PIDG   + K 
Sbjct: 69  DIRRDDIGCILFGSDKEIKEGCKVTRTKKRAGIPVGDAYIGRVVNALGAPIDGKGEI-KS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I ++ P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 128 DDYRPIENEAPGIIDRKSVSVPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAIDAI 187

Query: 183 RSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   VG++   V + +           ++V+ +T+ E   L+ +AP +  
Sbjct: 188 LNQKGKDTICIYVAVGQKASTVAKMVNTLSQYGAMDYTIVLSSTASEPAPLQYIAPYSGT 247

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 248 ALAEYFMYQGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSR 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 308 LSEEKGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   SL   + +  E     +   +   +D    + +     + + L
Sbjct: 368 SRVGGAAQTKAMKKAAGSLRIDLAQCREME---VFTQFSSDLDPATKEMIQYGKGLTEML 424

Query: 418 KQS 420
           KQ 
Sbjct: 425 KQP 427


>gi|161986640|ref|YP_832086.2| F0F1 ATP synthase subunit alpha [Arthrobacter sp. FB24]
 gi|190358293|sp|A0JY66|ATPA_ARTS2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 545

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 94/446 (21%), Positives = 180/446 (40%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G +++       V  L   V   + +  +      LG    
Sbjct: 14  ALNEFAASYEPGNAERVEVGRVTTAGDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  + +  +G    I  G  V   G+   +     + GRV++ LG+PID    + K +
Sbjct: 70  LDVREIGVIVLGDFTGIEEGQEVHRTGQVLSVPVGDAFLGRVVDPLGQPIDDLGEI-KAE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 129 TTRALELQAPGVTQRKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKSAIAIDTII 188

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A     D       I   +G++   +    +    +   + + +V + + +    + 
Sbjct: 189 NQKANWASGDVTKQVRCIYVAIGQKASTIAAVRQTLEDNGALEYTTIVASPASDPAGFKY 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 249 LAPYAGSAIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 308

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 309 LLERCAKLSDELGAGSMTGLPLIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   RD++    +   +D    + + + 
Sbjct: 369 VDVGVSVSRVGGAAQVKSMKKVSGTLKLELAQY---RDMQAFAMFASDLDAASRQQLTRG 425

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    E+    I  
Sbjct: 426 ARLMELLKQGQYSPFPVENQVVSIWA 451


>gi|12659363|gb|AAG60216.1| ATPase alpha subunit [Cinnamomum verum]
          Length = 413

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/410 (22%), Positives = 166/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPESNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 402


>gi|54301814|ref|YP_131807.1| F0F1 ATP synthase subunit alpha [Photobacterium profundum SS9]
 gi|81614756|sp|Q6LKZ8|ATPA2_PHOPR RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|46915234|emb|CAG22007.1| putative ATP synthase alpha subunit protein [Photobacterium
           profundum SS9]
          Length = 513

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 190/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L                 G I S++    ++  L+  V  G+ +   G  
Sbjct: 1   MQLNSNEISDLIRQRIATFNVTSQARNEGTIVSVSDGIISINGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYALALNLERHSVGAVVMGPYSDLAEGLKVKGTGRILEVPVGRGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    +    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAI-ENDGYSPVEIIAPGVIERQSVDQPIQTGYKAVDAMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +   ++  + D   K +   +G++   +   +      D LK ++VVVAT+ ++  L+
Sbjct: 176 TAMAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHDALKNTIVVVATASDAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNVSYVERFTKGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTHLFNSGLRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDDATRKQLDHGEKVTELMKQKQ 435


>gi|327478790|gb|AEA82100.1| FliI/YscN family ATPase [Pseudomonas stutzeri DSM 4166]
          Length = 444

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 157/420 (37%), Positives = 224/420 (53%), Gaps = 6/420 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L    G +  ++ +      L      G    V QG  S    QV+  N DI Y+ P   
Sbjct: 21  LAKVSGRLVRVSGMLL--ESLGCQRMTGQRCYVEQGDGSMLEAQVVGFNRDITYLMPFKK 78

Query: 78  GEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              ++ G  VF      ++     W GRV+N LG+P+D    LG G   +         +
Sbjct: 79  PVGLTAGSRVFPAPDDAKLHIDESWLGRVVNGLGEPLDELGKLG-GRDPLPTELPSVNPL 137

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ V +    G+R I+    L  GQR+G+FAGSG+GKS LL M  R    D V++ L+G
Sbjct: 138 KRKPVSEALDVGVRAINATLTLGKGQRVGLFAGSGVGKSVLLGMITRQTKADVVVVGLIG 197

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV+EF+      + LKK+VVVVA ++ESP++R  A     +IA YF  +G +VLL+
Sbjct: 198 ERGREVQEFLLHSLGEEGLKKAVVVVAPANESPLMRLKATELCHSIAAYFRDQGHDVLLL 257

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + REIA   GE P  +GYP SVF  LP L+E  G    + G+++A+ +VL 
Sbjct: 258 VDSLTRYAMAQREIALALGEPPATKGYPPSVFGMLPELVESAGNGASDNGSLSAIYTVLA 317

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+  DPI D  R+ILDGHIVL+R LAE G YP +D  ASVSR   +            
Sbjct: 318 EGDDQQDPIVDCARAILDGHIVLSRRLAEAGHYPAIDVCASVSRCMSQVGQPAHLGAARQ 377

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L      FE+ +++  +GGY PG D+  D+AV   P I  FL+Q   + +  +      +
Sbjct: 378 LKECYSTFEKIKELIPLGGYTPGADIKTDRAVQLAPTIERFLRQDVGEAAELETSVATLQ 437


>gi|114565197|ref|YP_752711.1| F0F1 ATP synthase subunit alpha [Shewanella frigidimarina NCIMB
           400]
 gi|122298239|sp|Q07VU2|ATPA2_SHEFN RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|114336490|gb|ABI73872.1| ATP synthase F1, alpha subunit [Shewanella frigidimarina NCIMB 400]
 gi|149675737|dbj|BAF64751.1| FOF1-type ATP synthase alpha subunit [Shewanella livingstonensis]
          Length = 513

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I +++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIQQFDVVSEARNEGTIVAVSDGIIRINGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G    ++ GD V   GR   +       GRV+N LG+PID
Sbjct: 59  --CFAIALNLERDSVGAVVMGPYANLAEGDKVRTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-NDGFSPVEVIAPGVIERKSVSQPIQTGYKAVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +   K +   +G++   +   +           ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKESGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  ++ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCSMGEYFRDRGEDSLIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G    + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNVNYVEKFTKGAVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|221201936|ref|ZP_03574973.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2M]
 gi|221207557|ref|ZP_03580565.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2]
 gi|221172403|gb|EEE04842.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2]
 gi|221178356|gb|EEE10766.1| flagellar protein export ATPase FliI [Burkholderia multivorans
           CGD2M]
          Length = 527

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 151/441 (34%), Positives = 227/441 (51%), Gaps = 21/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINL 67
           A       +   G ++    +      L   + +G     +      L     +V+  + 
Sbjct: 87  ARSQRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPYAEAEVVGFSG 144

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF----------RISPSACWCGRVINALGKPIDGDD 117
           + +++ P      +  G  V+   R           R+       GRV++A G+P+DG  
Sbjct: 145 ERLFLMPTTDVAGVLPGARVWPLERAPVADPLAGAKRLPVGWEMLGRVVDAAGRPLDGLG 204

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 205 PL-ASKVDAPLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVL 263

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR     
Sbjct: 264 LGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAA 323

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 324 YATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 383

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS
Sbjct: 384 TGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEAS 443

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P I  F
Sbjct: 444 ISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIEAF 503

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   + +    F      L
Sbjct: 504 LQQGFRECA---PFASSLAAL 521


>gi|89112844|gb|ABD61034.1| ATPase alpha subunit [Lomandra obliqua]
          Length = 368

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 87/370 (23%), Positives = 156/370 (42%), Gaps = 19/370 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 3   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGA 62

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 63  LSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 121

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 122 IDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 181

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 182 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 241

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 242 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFY 301

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    
Sbjct: 302 RGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQ 358

Query: 405 KAVHQVPIIY 414
             +++   + 
Sbjct: 359 ALLNRGARLT 368


>gi|124360831|gb|ABN08803.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region; H+-transporting two-sector ATPase, delta/epsilon
           subunit [Medicago truncatula]
          Length = 614

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ QG   D +GQ I +  ++        V    
Sbjct: 21  GRITQIIGSVLDVVFPPGKMPNIYNALIVQG--RDTVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G +V + G    +       GR+ N LG+PID    +  G  S  I    P
Sbjct: 79  MSATDGLKRGMVVINTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20146566|gb|AAM12437.1| ATP synthase alpha subunit [Empetrum nigrum]
          Length = 379

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/383 (23%), Positives = 159/383 (41%), Gaps = 22/383 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  SLG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDGLGVPIDGRGSLGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 120 LIIGDRQTGKTAIAVDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 179

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 180 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 239

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 240 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 300 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VA 356

Query: 391 LIGGYRPGVDLILDKAVHQVPII 413
               +   +D      +++   +
Sbjct: 357 AFAQFGSDLDAATQALLNRGARL 379


>gi|223667987|gb|ACN11589.1| F1-ATPase alpha subunit [Pseudovanilla foliata]
          Length = 422

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVREPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANAFSYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALMI 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|160688728|gb|ABX45144.1| ATPase subunit 1 [Polysphondylium pallidum]
          Length = 533

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/424 (26%), Positives = 197/424 (46%), Gaps = 20/424 (4%)

Query: 8   LAQLAEDYSKNLVVQ---GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           L  L + Y  N V      G +  I      V+ L++ + +G+ V   GKN    G  + 
Sbjct: 33  LKSLNQRY--NFVKNAGKFGKVLFIKDGVVKVSGLNK-IKIGEKVEFLGKN--LFGMALN 87

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V I   G  + I  G +V    + F I       GRV++ LG+PIDG + + +  
Sbjct: 88  LEANSVGIVIFGEDKLIHEGVIVKRCDQNFAIKIDRTMLGRVVDVLGQPIDGKNEIKETK 147

Query: 124 LSMEI--MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            +  I    K P  + R+ V +   TG++++D   P+  GQR  +      GKS +    
Sbjct: 148 NARLISLERKAPGIVTRKSVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSAIAIDA 207

Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLT 237
             +   +K II +   VG++   +R  +E   +   L+ S++VV+T+ ++  L+ +AP +
Sbjct: 208 ILNQKTNKDIICVYVSVGQKKSTIRRLVEMLNMKGALEYSIIVVSTASDASPLQFLAPYS 267

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              I E+F  KG++ L+I D +++ A + R+++      P    YP  VF    RLLER 
Sbjct: 268 GCAIGEFFRDKGEHALIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERA 327

Query: 298 GPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
               ++ G+   TA   +     + +  I  +V SI DG I L + L  +G  P V+   
Sbjct: 328 AKLNEKYGSGSLTAFPIIETQAGDVSAYIPTNVISITDGQIFLEKDLFNKGIRPAVNVGL 387

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A SA  K+L  +L   + ++ E   +     +    D +   A+ +  I+ +
Sbjct: 388 SVSRVGSAAQSAVMKRLAGALKLELAQYRE---LARFEQFSSNNDAVTTAALKKGKIVIE 444

Query: 416 FLKQ 419
            LKQ
Sbjct: 445 MLKQ 448


>gi|89112864|gb|ABD61044.1| ATPase alpha subunit [Dillenia indica]
          Length = 399

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 87/377 (23%), Positives = 157/377 (41%), Gaps = 19/377 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 5   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 64

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 65  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 123

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 124 IDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 183

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 184 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 243

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V  I DG I L   L  
Sbjct: 244 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFY 303

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 304 RGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQ 360

Query: 405 KAVHQVPIIYDFLKQSP 421
             +++   + +  KQ  
Sbjct: 361 ALLNRGARLTEVPKQPQ 377


>gi|330961223|gb|EGH61483.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 452

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 151/411 (36%), Positives = 227/411 (55%), Gaps = 13/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
           V  G +  +  +      +     +G   +    +S    +   +V+  +   V++ PVG
Sbjct: 26  VVEGRLLRMVGLTLEAEGM--RAAMGSRCMVINDDSHHPVEVEAEVMGFSGGKVFLMPVG 83

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               I+ G  V      GR          GRV++  G+P+DG   + K +  + +     
Sbjct: 84  SVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDGRSPI-KAEDWVPMDGPTI 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ 
Sbjct: 141 NPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVG 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NV
Sbjct: 201 LIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+ITA  +
Sbjct: 261 LLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSITAFYT 320

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S +    
Sbjct: 321 VLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMAR 380

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                 L  R+++TRD+  +G Y  G D   D A+   P++  + +Q+  +
Sbjct: 381 AQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQALRE 431


>gi|312884909|ref|ZP_07744599.1| flagellum-specific ATP synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367386|gb|EFP94948.1| flagellum-specific ATP synthase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 441

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 149/434 (34%), Positives = 232/434 (53%), Gaps = 5/434 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E L            V  G +  +  +    +       +G     +  + D   +V+  
Sbjct: 6   ERLTHYKTQGISCRPVASGKLVRVVGLTLEASG--CRAPIGSLCHVETMHGDIEAEVVGF 63

Query: 66  NLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           + D +++ P      I  G  V        +S      GRVI+ +G P+DG   +   D 
Sbjct: 64  SGDKLFLMPSEQITGILPGAKVTPLTSESGLSVGMELLGRVIDGVGNPLDGLGPIY-TDK 122

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                S+    + R+ +      GI+ I+    +  GQRIG+FAGSG+GKS  L M  R 
Sbjct: 123 HASFNSEPINPLTRKPITAPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRG 182

Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
                V++ L+GERGREV+EFI++ LG D  ++SVVV A +D SP++R     TA+T+AE
Sbjct: 183 TTAQVVVVGLIGERGREVKEFIDEILGVDGRQRSVVVAAPADASPLMRLKGCQTALTVAE 242

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           +F  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP L+ER G     
Sbjct: 243 FFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGSDT 302

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R +A+ G YP +D   SVSR+  +
Sbjct: 303 QGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSREMADSGHYPAIDVEKSVSRVMPQ 362

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             S ++  +  ++  ++    +  D+  IG Y+PG D  +D A    P +  +L+Q   +
Sbjct: 363 IVSEEQLLMSKAVRQVLSICRKNHDLVSIGAYKPGSDAAIDSAFTLKPSLDTYLQQEMKE 422

Query: 424 LSSEDVFQEITKKL 437
               D+   + + L
Sbjct: 423 SVPFDMSVSMLRHL 436


>gi|125657204|gb|ABN48692.1| flagella biosynthesis/type III secretory pathway ATPase
           [Burkholderia pseudomallei]
          Length = 417

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 161/420 (38%), Positives = 230/420 (54%), Gaps = 11/420 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81
            G ++ +T +    +     +  G+  V +  + D +  QV+  N +  ++ P      +
Sbjct: 2   TGRLTGVTGLLLKASG--CRLETGERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGL 59

Query: 82  SLGDLV---FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
             G  V      G  RI     W GR++N LG+ IDG  SLG GD  +         + +
Sbjct: 60  VAGAQVLSCERQGLLRI--GRSWLGRIVNGLGEAIDGRGSLG-GDAVLRAHPAPVNPLRK 116

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           + V      G+R I+    L  GQRIG+ AGSG+GKS LL M  R+   D V++ L+GER
Sbjct: 117 RPVRDVLDVGVRAINGLLTLGRGQRIGLMAGSGVGKSMLLGMITRATQADVVVVGLIGER 176

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF++       L KSV+V A +DESP++R  A      IA +F   G NVLL++D
Sbjct: 177 GREVREFVDHALGEAGLAKSVLVAAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVD 236

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REIA + GE P  RGYP SVF  LP+L+E  G  E   G+++A+ +VL +G
Sbjct: 237 SLTRYAMAQREIALSVGEPPATRGYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEG 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ NDP+ D+ R+ILDGHIVL R LAE G YP +D   SVSR   +   A+   L   + 
Sbjct: 296 DDQNDPVVDTARAILDGHIVLTRELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +I R E+ RD+  +GGY  G D   D+AV +   I  FL+Q   D++  D      K+L
Sbjct: 356 EMIGRHEQIRDLIALGGYVQGADPATDEAVAKAARIDTFLRQDMLDVARHDATLAALKEL 415


>gi|34539477|gb|AAQ74622.1| F1-ATPase alpha subunit [Xiphidium caeruleum]
          Length = 414

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 25/409 (6%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLV 195
           ++ +D   P+  GQR  +      GK+ +      +                   +   +
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRVEISSSSETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|89112846|gb|ABD61035.1| ATPase alpha subunit [Cyperus alternifolius]
          Length = 368

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 160/369 (43%), Gaps = 18/369 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 4   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    L+   + +     +   +G++   V + ++     N  + S++V AT+ + 
Sbjct: 123 IDTILNQKELNSKGKENEKLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDP 182

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 183 APLQFLAPYSGCAMGEFFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 242

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 243 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 302

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D     
Sbjct: 303 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQA 359

Query: 406 AVHQVPIIY 414
            +++   + 
Sbjct: 360 LLNRGARLT 368


>gi|330866447|gb|EGH01156.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 452

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 152/411 (36%), Positives = 225/411 (54%), Gaps = 13/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
           V  G +  +  +      L     +G   V    +S    +   +V+  +   V++ PVG
Sbjct: 26  VVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDDSHHPVEVEAEVMGFSGGKVFLMPVG 83

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               I+ G  V      GR          GRV++  G+P+DG   + K +  + +     
Sbjct: 84  SVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDGRSPI-KAEDWVPMDGPTI 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ 
Sbjct: 141 NPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVG 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NV
Sbjct: 201 LIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +
Sbjct: 261 LLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYT 320

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R +LDGHI+L+R LAEEG YP +D  AS+SR+     S +    
Sbjct: 321 VLSEGDDQQDPIADSARGVLDGHILLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMAR 380

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                 L  R+++TRD+  +G Y  G D   D A+   P++  + +Q   D
Sbjct: 381 AQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRD 431


>gi|223667959|gb|ACN11579.1| F1-ATPase alpha subunit [Cleistes sp. Chase O-430]
          Length = 423

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/406 (22%), Positives = 164/406 (40%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSDSETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILPEANAFEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQFRAMKQVRGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 398


>gi|227820522|ref|YP_002824493.1| type III secretion component, RhcN, ATP synthase [Sinorhizobium
           fredii NGR234]
 gi|227339521|gb|ACP23740.1| type III secretion component, RhcN, ATP synthase [Sinorhizobium
           fredii NGR234]
          Length = 448

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 152/421 (36%), Positives = 224/421 (53%), Gaps = 11/421 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G +  IT +   V   +  V +G+    +     +    +V+    +   + P+G  + +
Sbjct: 30  GRVRRITGII--VHATAPMVRIGELCHLRDPVSGATVPAEVVGFEEEEAVLTPIGDLDGM 87

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPID---GDDSLGKGDLSMEIMSKVPPAMN 137
           S    V   GR  +I       GRV+N LG+ +D           D         P A+ 
Sbjct: 88  STRAEVIATGRTLQIPVCDDLLGRVVNPLGEILDVSDERAIPVVTDTYYPTHRPPPHALR 147

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  + +  + GIR ID    +  GQR+G+F   G+GKS+LLS   R    D ++I L+GE
Sbjct: 148 RDLITEPLQLGIRAIDGLLTVARGQRVGIFGEPGVGKSSLLSAIVRGTKADVIVIGLIGE 207

Query: 198 RGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE     +  ++SVVVVATSD   I R  A   A  IAEYF  +  +VLL++
Sbjct: 208 RGREVREFIEGQLGEEGRRRSVVVVATSDRPAIERVKAAYAATAIAEYFRDQRRDVLLLM 267

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI   +GE P  RGYP S+F+ LPRLLER GP   + G+ITA+ +VL +
Sbjct: 268 DSVTRFARAQREIGLAAGEPPTRRGYPPSLFAALPRLLERAGP--GQGGSITALYTVLTE 325

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD   DP+A+  ++ILDGHI+L+ +LAE   +P +D L S SRL +       +   + +
Sbjct: 326 GDGTLDPVAEETKAILDGHIMLSSALAERNFFPAIDILKSRSRLMETVAGRTHRDHAARI 385

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L+ R+EE   +  +G Y  G D + D+A+ +   I  FL+QS  + S  +   E  + 
Sbjct: 386 RTLLARYEEIELLLRVGEYERGADALSDEAIDKRDAIEAFLQQSGDEFSPLEATVEHLRV 445

Query: 437 L 437
           L
Sbjct: 446 L 446


>gi|167849985|ref|ZP_02475493.1| type III secretion system ATPase [Burkholderia pseudomallei B7210]
          Length = 625

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 233/419 (55%), Gaps = 11/419 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 11  EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG+P+DG   
Sbjct: 69  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 129 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 187

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 308 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 365

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F
Sbjct: 366 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSF 424


>gi|308177045|ref|YP_003916451.1| H(+)-transporting two-sector ATPase subunit alpha [Arthrobacter
           arilaitensis Re117]
 gi|307744508|emb|CBT75480.1| H(+)-transporting two-sector ATPase, alpha chain [Arthrobacter
           arilaitensis Re117]
          Length = 545

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/446 (20%), Positives = 176/446 (39%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y   K    + G + + +     V  L   V   + +  +      LG    
Sbjct: 14  ALNEFASSYEPGKAERTEVGRVVAASDGIARVEGL-PSVMANELLKFEDG---TLGLAQN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   + +  +G    I  G  V   G    +     + GRV++ LG+P+D    +   +
Sbjct: 70  LDTREIGVVVLGDFTGIEAGQKVERTGEILSVPVGDGYLGRVVDPLGEPLDNLGPI-ASE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 129 GRRALELQAPGVTQRKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTIL 188

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A  +  D+      +   +G++   +    +        + + +V + + +    + 
Sbjct: 189 NQRANWESGDQTKQVRCVYVAIGQKASTIAAVRQTLEEQGALEYTTIVASPASDPAGFKY 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 249 LAPYAGSAIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 308

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++    I  +V SI DG I L   L    + P 
Sbjct: 309 LLERCAKLSDELGAGSMTGLPIIETKANDVGAFIPTNVISITDGQIFLQSDLFNANQRPA 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   RD++    +   +D    + + + 
Sbjct: 369 VDVGISVSRVGGSAQVKAMKKVSGTLKLELAQY---RDMQAFAMFASDLDAASKQQLTRG 425

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   +    ED    I  
Sbjct: 426 ARLMELLKQGQYTPYPVEDQVVSIWA 451


>gi|6561650|gb|AAF16994.1|AF197662_1 ATPase alpha subunit [Schisandra sphenanthera]
          Length = 418

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/411 (22%), Positives = 169/411 (41%), Gaps = 23/411 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           + S+      V  L++ +  G+ V      S   G    +  + V I   G    I  GD
Sbjct: 1   VVSVEDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGD 56

Query: 86  LVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           LV   G    +P      GRV++ALG PIDG  +L   +    +  K P  + RQ V + 
Sbjct: 57  LVKRTGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEP 115

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIIS 193
            +TG++ +D   P+  GQR  +      GK+ +      +                 +  
Sbjct: 116 MQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYV 175

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + 
Sbjct: 176 AIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHA 235

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+
Sbjct: 236 LIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTAL 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K
Sbjct: 296 PVIETQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMK 355

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           ++  S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 QVRGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 403


>gi|298487832|ref|ZP_07005872.1| Flagellum-specific ATP synthase fliI [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157557|gb|EFH98637.1| Flagellum-specific ATP synthase fliI [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 457

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 152/408 (37%), Positives = 224/408 (54%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
           V  G +  +  +      L     +G   V    +S    +   +V+  +   V++ PVG
Sbjct: 26  VVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDDSHHPVEVEAEVMGFSGSKVFLMPVG 83

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               I+ G  V      GR          GRV++  G+P+DG   + K +  + +     
Sbjct: 84  SVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDGRSPI-KAEDWVPMDGPTI 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ 
Sbjct: 141 NPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVG 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NV
Sbjct: 201 LIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +
Sbjct: 261 LLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYT 320

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S +    
Sbjct: 321 VLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMAR 380

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 L  R+++TRD+  +G Y  G D   D A+   P++  + +Q 
Sbjct: 381 AQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQG 428


>gi|170724358|ref|YP_001752046.1| F0F1 ATP synthase subunit alpha [Pseudomonas putida W619]
 gi|226739927|sp|B1JFU3|ATPA_PSEPW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169762361|gb|ACA75677.1| ATP synthase F1, alpha subunit [Pseudomonas putida W619]
          Length = 514

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 187/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDNLDVSSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYDTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG  +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTETDA-VEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++  + D     +   VG++   V   +     +     ++VVVA++ ES  L+ 
Sbjct: 178 AMAIDAIINQKDSGIFCVYVAVGQKRSTVANIVRKLEENGALANTIVVVASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|256370615|ref|YP_003108440.1| ATP synthase F1 subunit alpha [Candidatus Sulcia muelleri SMDSEM]
 gi|256009407|gb|ACU52767.1| ATP synthase F1, alpha subunit [Candidatus Sulcia muelleri SMDSEM]
          Length = 529

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 100/432 (23%), Positives = 176/432 (40%), Gaps = 35/432 (8%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +++ G I +I      V  L+  V  G+ V  +    +  G V+ +  + V +  +G   
Sbjct: 26  ILESGIIMNIGDGVVNVYGLN-NVIYGEIVEFEND--ETKGIVLNLEEENVGVILIGPSN 82

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  GD V   G+   I+      GRV+N+ G PIDG   +      M +  K P  + R
Sbjct: 83  GLKEGDKVIRTGKIASINVGEGMLGRVLNSFGVPIDGKGPIEGKVFKMPLERKAPGVIYR 142

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-------LLSMFARSDCFDKVI 191
           + V++  +TGI+ ID   P+  GQR  +      GK+T           F  +      I
Sbjct: 143 EPVKEPLQTGIKCIDSMIPIGKGQRELIIGDRQTGKTTIAIDTIINQKQFYENGNPVYCI 202

Query: 192 ISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   +   I+     D L  ++++ A + +S  ++  AP +   I E+F   G 
Sbjct: 203 YVSIGQKASTLASIIKILNKNDALSYTIILTANASDSAAMQVFAPFSGTAIGEFFRDTGR 262

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE------- 303
           + L+I D +++ A + REI+      P    YP  +F    RLLER      +       
Sbjct: 263 SALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDIFYLHSRLLERSSKIISDNKIASEM 322

Query: 304 -------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
                         G++T++  +     + +  I  +V SI DG I L  +L   G  P 
Sbjct: 323 NDVPKSIKKKLLGGGSLTSLPIIETQFGDVSSYIPTNVISITDGQIFLETNLFNSGIRPA 382

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     KK+  +      +F E         +   +D    + + + 
Sbjct: 383 INEGISVSRVGATAQIKSMKKIAGTFKLDQAQFRELE---SFSQFGSDLDATTKEIIEKG 439

Query: 411 PIIYDFLKQSPS 422
               + LKQS +
Sbjct: 440 KRNIEILKQSIN 451


>gi|289208340|ref|YP_003460406.1| flagellar protein export ATPase FliI [Thioalkalivibrio sp. K90mix]
 gi|288943971|gb|ADC71670.1| flagellar protein export ATPase FliI [Thioalkalivibrio sp. K90mix]
          Length = 458

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 149/408 (36%), Positives = 227/408 (55%), Gaps = 6/408 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G +S +T + +    L   + +G   +  G+N   +  +V+    D  ++ P  +   ++
Sbjct: 41  GRLSRLTGLTFEAEGL--RLPMGGRALIHGENGAAVPAEVVGFQNDRTFLMPEELASGLT 98

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  +     +  I       GRVI+A G+P+DG   L   D S  +  +    + R  V
Sbjct: 99  PGARIEPLDIQREIPVGDALLGRVIDANGQPLDGKGPLRARDHS-PLSGRPINPLQRAPV 157

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
            +    GIR I+    +  GQR+G+FAGSG+GKS LL M  R+   D +++ L+GERGRE
Sbjct: 158 REPLDVGIRSINGLLSVGRGQRLGLFAGSGVGKSVLLGMMTRNTSADVIVVGLIGERGRE 217

Query: 202 VREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V EFI +    ++ +++VVV   +D+SP+LR+     A T+AE F  +G NVLL++DS+T
Sbjct: 218 VNEFIHEILDEESRQRTVVVAVPADQSPLLRQHGAWVATTVAESFRDRGLNVLLLMDSLT 277

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA   REIA   GE P ++GY  SVF+ LP+L+ER G  +   G+ITA  +VL +GD+ 
Sbjct: 278 RFAQGAREIAMAIGEPPASKGYAASVFARLPQLVERAGNGDVGGGSITAFYTVLAEGDDQ 337

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDPI D+ R+ILDGH+VL+R +AE GRYP +D  ASVSR+     + + ++       L 
Sbjct: 338 NDPIVDAARAILDGHVVLSREIAETGRYPAIDVSASVSRVMSALITPEHEQAARRFRDLA 397

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             +   RD+  +G YR G D  LD+AV     +  +L Q   +    D
Sbjct: 398 STYMRNRDLIAVGAYRRGADTHLDEAVAMHERLEAYLGQGRDEAVGFD 445


>gi|126174194|ref|YP_001050343.1| type III secretion system ATPase [Shewanella baltica OS155]
 gi|125997399|gb|ABN61474.1| ATPase, FliI/YscN family [Shewanella baltica OS155]
          Length = 443

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 159/411 (38%), Positives = 230/411 (55%), Gaps = 11/411 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  + +     T        G+  +     +    +V+ +  +   + P  +  
Sbjct: 29  VRYFGKVQEVGATLVRATL--PGAHQGELCLI---GNRLRAEVVAVKGNEALLSPFDVTA 83

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+LV   G   ++       GRV++ LG P+DG                 P  ++R
Sbjct: 84  GLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDGYG--LTATALRPNQGSAPNPLSR 141

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q ++     GIR ID       GQRIG+FA +G GKSTLL M A     D ++++LVGER
Sbjct: 142 QLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKSTLLGMIAAHCQADVIVLALVGER 201

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI  +   +   ++V+VVATSD  P+ R  A LTA TIAEYF  +G NVLL++D
Sbjct: 202 GREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLTATTIAEYFRDQGKNVLLMVD 261

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA S REIA  +GE PV+ GYP SVF  L  L+ER GP+   +G+IT + +VLV+G
Sbjct: 262 SLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERAGPAA--QGSITGIYTVLVEG 319

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASVSR+ D+  S +++   + + 
Sbjct: 320 DDMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASVSRVMDQIVSPEQRCHAAKMR 379

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            L+  ++E + +  +G Y  G D   D+AV +   I  FL QS ++ S  +
Sbjct: 380 QLLALYQEVQLLIRVGEYVKGADKETDEAVARHQDIQQFLCQSVNEFSPYE 430


>gi|34539253|gb|AAQ74510.1| F1-ATPase alpha subunit [Chloranthus spicatus]
          Length = 415

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 167/408 (40%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 400


>gi|12659351|gb|AAG60210.1| ATPase alpha subunit [Asimina triloba]
          Length = 413

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/410 (22%), Positives = 170/410 (41%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK      T+L+    +   +        +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGNSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 402


>gi|34539281|gb|AAQ74524.1| F1-ATPase alpha subunit [Doryanthes excelsa]
          Length = 415

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 163/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|12659377|gb|AAG60223.1| ATPase alpha subunit [Grevillea robusta]
          Length = 411

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 164/405 (40%), Gaps = 21/405 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVFGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERG 199
           ++ +D   P+  GQR  +      GK+ +      +               +   +G++G
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQKG 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 KLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 397


>gi|89074726|ref|ZP_01161184.1| ATP synthase subunit A [Photobacterium sp. SKA34]
 gi|89049490|gb|EAR55051.1| ATP synthase subunit A [Photobacterium sp. SKA34]
          Length = 513

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 99/454 (21%), Positives = 189/454 (41%), Gaps = 32/454 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +N          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISALIKQRIENFNVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G    +  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --LFALALNLERDSVGAVVMGPYASLQEGMKVTGTGRILEVPVGPALLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPI-ETETFSPVEVIAPGVIDRKSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + +     +   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKNSGIYSVYVAIGQKASTIANVVRKLEEHGALENTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVSEHYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTELFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +D    K +     + + +KQ     +   VF++
Sbjct: 413 LDDATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 444


>gi|256383939|gb|ACU78509.1| ATP synthase F1, alpha subunit [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256384771|gb|ACU79340.1| ATP synthase F1, alpha subunit [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455222|gb|ADH21457.1| ATP synthase F1, alpha subunit [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 525

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 179/434 (41%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++  E + +   +Y+K +V  + G + S+      +  L   +  G+F+       +  
Sbjct: 5   IKEISEMIEKQIRNYNKEIVQTEQGTVVSVGDGIALIYGLDNAIM-GEFLKFPN---NVY 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDS 118
           G V+ +    V    +G    I  GD+V    +           GRVINAL KPID    
Sbjct: 61  GMVLNLEESAVGAVILGDETLIREGDIVKRTNKVVETPVGDALLGRVINALSKPIDNLGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        I       M R+ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 INFTKTK-PIERVATSVMARKSVSQPLETGILAIDSAIPIGKGQRELIIGDRQTGKTAIA 179

Query: 179 SMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +  +   K I   +G++   + + +E          +VVV A + +   L+ ++P
Sbjct: 180 IDAIINQRNKNVKCIYVAIGQKDSTIVQVVEKLKKYGAMEYTVVVNAGASQPAPLQYLSP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              +TIAE +   G +VL++ D +++ A S R+++      P    YP  VF    RLLE
Sbjct: 240 YVGITIAEEWMENGSDVLIVYDDLSKHAVSYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +    G+ITA+  +     + +  I  +V SI DG I L+  L  +G  P VD 
Sbjct: 300 RAARVNENYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLSSELFNQGIRPAVDI 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E         +   +D      + Q   I
Sbjct: 360 GPSVSRVGSSAQIKSIKQVSGTLKLELAQYYELE---SFAKFGSDLDESTKATLDQGAKI 416

Query: 414 YDFLKQSPSDLSSE 427
              L Q   +   +
Sbjct: 417 IQMLIQKQHNPLEQ 430


>gi|71066580|ref|YP_265307.1| F0F1 ATP synthase subunit alpha [Psychrobacter arcticus 273-4]
 gi|115312268|sp|Q4FQ35|ATPA_PSYA2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71039565|gb|AAZ19873.1| ATP synthase F1, alpha subunit [Psychrobacter arcticus 273-4]
          Length = 514

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 187/447 (41%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +   ++L         G I  ++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISNLIKQRIQDLDAGATAKNEGTIVKVSDGIVQIHGL-EDAMYGEMIEFEG--- 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           +  G  + +  D V    +G   ++  G   +  GR   +       GRV++ALG PIDG
Sbjct: 59  EVYGMALNLERDSVGAVVLGDFLKLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++ ++    P  ++RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKMTDKVEKIAPGVIDRQSVDQPVMTGYKSVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++ A+     K +   +G++   +   +         + + VVVA++ E   L+ 
Sbjct: 178 AMAIDAIIAQKASGIKCVYVAIGQKRSTIANVVRKLEQTGALEYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIVFDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNAAYVEKFTNGEVVGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SSLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    + +     + + +KQ      S
Sbjct: 415 DDATREQLDHGERVTELMKQKQYQPMS 441


>gi|126176164|ref|YP_001052313.1| FliI/YscN family ATPase [Shewanella baltica OS155]
 gi|125999369|gb|ABN63444.1| ATPase, FliI/YscN family [Shewanella baltica OS155]
          Length = 449

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 150/424 (35%), Positives = 235/424 (55%), Gaps = 9/424 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G +  +  +      +   + +GD    +G+N   +  +V+  + D++ + P+ 
Sbjct: 18  PVARVYGRLIRVNGLLL--EAVGCQLGMGDRCQIEGRNGRLIEAEVVGFHRDVLCLMPIE 75

Query: 77  IGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V        I+      GRV++ LG+P+D    L      +         
Sbjct: 76  PTQGLMPGARVLPITDEQTIAIGDGLLGRVLDGLGQPLDSLGDLTDISQ-VPQSHTSYNP 134

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQ + +    GIR I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+
Sbjct: 135 LLRQPIRQPLDVGIRAINSLLPIGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLI 194

Query: 196 GERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFIE+    +  K++V++ A +D +P++R  A   + +IA  F  +G  VLL
Sbjct: 195 GERGREVREFIEETLGEEGRKRAVIIAAPADTTPLMRLRAMRLSHSIACAFRDQGKQVLL 254

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA + GE P  +GYP S F++LPRL+E  G  E   G +TA  +VL
Sbjct: 255 LVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVL 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DP+AD+ R+ILDGHIVL+R LAE+G +P +D  ASVSRLA    ++   +   
Sbjct: 315 AEGDDQQDPVADAARAILDGHIVLSRKLAEQGHFPAIDINASVSRLAMHIATSSSIEQSQ 374

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
              HL+ R+ E RD+  +GGY+ G D  +D AV   P +  FL+Q+     S+    E  
Sbjct: 375 IFRHLLSRYNEVRDLLPLGGYQAGQDPEMDLAVRVYPEMARFLRQTTH---SKVNLAESL 431

Query: 435 KKLQ 438
            +L+
Sbjct: 432 AQLE 435


>gi|229591850|ref|YP_002873969.1| flagellum-specific ATP synthase [Pseudomonas fluorescens SBW25]
 gi|229363716|emb|CAY51109.1| flagellum-specific ATP synthase [Pseudomonas fluorescens SBW25]
          Length = 452

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 154/439 (35%), Positives = 237/439 (53%), Gaps = 18/439 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +  + A+    Y++   + G     G +  +  +      L     +G   +    +
Sbjct: 1   MRLDRTSFAKRLSGYAEATSLPGQPILEGRLLRMVGLTLEAEGL--RAAMGSRCMVINDD 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINA 108
           S        +V+  + + +++ PVG    I+ G  V      GR          GRV++ 
Sbjct: 59  SYHPVQVEAEVMGFSGNKIFLMPVGSLAGIAPGARVVPLADTGRL--PMGMSMLGRVLDG 116

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
            G+ +DG   + K +  + +       +NR  +      GIR I+    +  GQR+G+FA
Sbjct: 117 AGRALDGKGGM-KAEDWVPMDGPTINPLNRNPISVPLDVGIRSINGLLTVGRGQRLGLFA 175

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G+GKS LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++
Sbjct: 176 GTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDA 235

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R  A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF
Sbjct: 236 PLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVF 295

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++LP+L+ER G +E   G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG 
Sbjct: 296 AKLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGH 355

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  AS+SR+     + +          L  R++++RD+  +G Y  G D   D A+
Sbjct: 356 YPAIDIEASISRVMPAVVTPEHMARAQHFKQLWSRYQQSRDLISVGAYVAGGDRDTDLAI 415

Query: 408 HQVPIIYDFLKQSPSDLSS 426
              P +  +L+Q  +D  S
Sbjct: 416 ALQPQLVTYLRQGLNDKIS 434


>gi|84385787|ref|ZP_00988817.1| ATP synthase subunit A [Vibrio splendidus 12B01]
 gi|84379103|gb|EAP95956.1| ATP synthase subunit A [Vibrio splendidus 12B01]
          Length = 513

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 109/448 (24%), Positives = 188/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +D      V       G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLNSNEISDLIKDRISKFNVSTEARNEGTIVSVRDGIITINGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + ++   V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --KYALALNLDTHSVGAVVMGPYTDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVS-CDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L   ++  + D   K +   +G++   +   +      D LK ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEDYDALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG + L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A     KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D +  K +     + + +KQ      S
Sbjct: 413 LDDMTRKQLDHGERVTELMKQKQYSPMS 440


>gi|169628542|ref|YP_001702191.1| F0F1 ATP synthase subunit alpha [Mycobacterium abscessus ATCC
           19977]
 gi|226739914|sp|B1MLW0|ATPA_MYCA9 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|169240509|emb|CAM61537.1| ATP synthase alpha chain AtpA [Mycobacterium abscessus]
          Length = 548

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 96/419 (22%), Positives = 169/419 (40%), Gaps = 22/419 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S        V  L   V   + +   G     LG  + ++   V    +G  ++I  
Sbjct: 32  GIVSDAGDGIAHVEGL-PSVMTQELLEFPGG---VLGVALNLDERSVGTVVLGDFQDIEE 87

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G    +     + GRVIN LG+PIDG   + + +    +  + P  + RQ V 
Sbjct: 88  GQQVKRTGEVLSVPVGDAFLGRVINPLGQPIDGRGDI-EAETRRALELQAPSVVQRQSVS 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS----------DCFDKVII 192
           +  +TGI+ ID  TP+  GQR  +      GK+ +      +              + I 
Sbjct: 147 EPLQTGIKAIDSQTPIGRGQRQLIIGDRKTGKTAVCIDTILNQKQAWETGDPAQQVRCIY 206

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             VG++G  V             + + +V A + ++   + +AP T   + +++  +G +
Sbjct: 207 VAVGQKGSTVAAVRRTLDEAGALEYTTIVAAPASDAAGFKWLAPYTGSALGQHWMYQGKH 266

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
           VL++ D +T+ A + R I+      P    YP  VF    RLLER      E   G++T 
Sbjct: 267 VLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSLTG 326

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +    ++ +  I  +V SI DG   L   L  +G  P V+   SVSR+   A     
Sbjct: 327 LPIIETKANDISAYIPTNVISITDGQCFLQTDLFNQGVRPAVNVGVSVSRVGGAAQIKAM 386

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           K++  SL   + ++ E         +   +D      + +   + + LKQ  +     +
Sbjct: 387 KEVAGSLRLELSQYRELE---AFAAFASDLDATSKAQLERGARLVELLKQPQNSPYPVE 442


>gi|3273606|gb|AAC24785.1| F1-ATPase alpha subunit [Canna indica]
          Length = 419

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 164/407 (40%), Gaps = 21/407 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAXNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK+ +      +               +   +G+
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQ 176

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 177 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 236

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 237 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 297 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      ++    + +  KQ  
Sbjct: 357 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNXXARLTEVPKQPQ 400


>gi|167561143|ref|ZP_02354059.1| flagellar protein export ATPase FliI [Burkholderia oklahomensis
           EO147]
 gi|167568362|ref|ZP_02361236.1| flagellar protein export ATPase FliI [Burkholderia oklahomensis
           C6786]
          Length = 521

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 222/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+    D +++ P  
Sbjct: 87  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSALPYAEAEVVGFAGDRLFLMPTT 144

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 145 AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDNLGPL-ASKVDA 203

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     + R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 204 PLAAPSINPLEREPIHHVLDVGVRAINTLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 263

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A ++AEYF
Sbjct: 264 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYF 323

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 324 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPQGGG 383

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR      
Sbjct: 384 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASISRAMTALI 443

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 444 DDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 503

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 504 PYAPSLAALDAL 515


>gi|312115964|ref|YP_004013560.1| ATP synthase F1 subunit beta [Rhodomicrobium vannielii ATCC 17100]
 gi|311221093|gb|ADP72461.1| ATP synthase F1, beta subunit [Rhodomicrobium vannielii ATCC 17100]
          Length = 477

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 190/418 (45%), Gaps = 22/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
            + G I  +T     V        + + +  Q   S  + +V   +    V    +   E
Sbjct: 4   RRVGRIRQVTGAVVDVQFDGPLPSILNALETQNHGSRLVLEVAQHLGESTVRTIAMDSTE 63

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR++N +G+PID    + K +    I ++ P  +++
Sbjct: 64  GLVRGQEVTDTGEAISVPVGEETLGRIMNVIGEPIDEAGPI-KSNQRRPIHAQAPSFVDQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +         + + V
Sbjct: 123 STEVEVLVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGYSVFAGV 182

Query: 196 GERGREVREFIEDYLGDNL------------KKSVVVVATSDESPILRKMAPLTAVTIAE 243
           GER RE  +   + +   +             K  +V    +E P  R    LT +T+AE
Sbjct: 183 GERTREGNDLYWEMIESKVNVDPHESGSSQGSKCSLVFGQMNEPPGARARVALTGLTVAE 242

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 243 YFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTS 300

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LAD 362
           KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR L  
Sbjct: 301 KGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRALEP 360

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +  K+   +  ++ R++  +DI  I G     +    + V +   I  FL Q 
Sbjct: 361 RIVGEEHYKVARQVQVILQRYKALQDIIAILGMDELSEED-KRTVARARKIERFLSQP 417


>gi|213964468|ref|ZP_03392668.1| ATP synthase F1, alpha subunit [Corynebacterium amycolatum SK46]
 gi|213952661|gb|EEB64043.1| ATP synthase F1, alpha subunit [Corynebacterium amycolatum SK46]
          Length = 547

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 103/438 (23%), Positives = 185/438 (42%), Gaps = 23/438 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +A     YS     +  G + S       V+ +   V   + +   G     +G    
Sbjct: 13  SAIANYTSSYSPEASREEVGVVISAADGIAQVSGM-PSVMTNELLEFPGG---VIGVAQN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D V +  +G  E +  GD V   G    I     + GRVIN LG+PIDG   +   +
Sbjct: 69  LDTDKVGVVVLGNFESLKEGDEVKRTGDVLSIPVGDKFLGRVINPLGQPIDGLGDIEAEE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             + +  + P  + RQ VE+   TGI+ ID  TP+  GQR  +      GK      T+L
Sbjct: 129 DRV-LELQAPTVLQRQPVEEPMATGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCLDTIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A  +  D     + I   +G++G  +    +        + + +V A + ++   + 
Sbjct: 188 NQKANWESGDPSKQVRCIYVAIGQKGSTIAGVRQTLEEQGALEYTTIVAAPASDAAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + +++  +G +VL+I D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPFAGAALGQHWMYQGKHVLVIYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      + G  ++TA+  +    ++ +  I  +V SI DG + L   L  +G  P 
Sbjct: 308 LLERAAKLSDDMGAGSLTALPIIETKANDVSAFIPTNVISITDGQVFLESDLFNQGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A +   KK+  +L   +  +   RD+     +   +D    + + + 
Sbjct: 368 INVGVSVSRVGGAAQTKGMKKVSGNLRLDLASY---RDLEAFAMFASDLDDASKRQLERG 424

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ  +     +
Sbjct: 425 QRLVELLKQKENHPQPVE 442


>gi|220935135|ref|YP_002514034.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996445|gb|ACL73047.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 460

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 142/424 (33%), Positives = 231/424 (54%), Gaps = 7/424 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
               +   G +  +  +      +   V  G   V     ++   +V+  + + V++ PV
Sbjct: 34  QARPLTAEGRLVRMVGLTLEAEGVRMPVG-GRCRVVSAGGAEVEAEVVGFSGERVFLMPV 92

Query: 76  GIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    ++    V      R +       GRV++  G+P+DG       + S+ +  +   
Sbjct: 93  GDISGLTPNARVIPTQHAREARVGEALLGRVLDGAGRPLDGLPP-PDCEASVSLNGRPLN 151

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R+ + +    G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D  ++ L
Sbjct: 152 PLARRPIHEPLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMTRYTNADVTVVGL 211

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREV EF+++ LG + + ++VVV   +D  P++R    + A +IAEYF  +G NVL
Sbjct: 212 IGERGREVNEFVQNILGPEGMARAVVVAVPADHPPLMRLHGAMLATSIAEYFRDQGLNVL 271

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + REI+   GE P  +GY  SVF+ LP L+ER G S++ +G +TA  +V
Sbjct: 272 LLMDSLTRFAQAQREISLAIGEPPATKGYTPSVFARLPHLVERAGNSDRGEGTMTAFYTV 331

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L +GD+ NDPIAD+ R+ILDGH+VL+R +AE GRYP +D  ASVSRL ++     + +  
Sbjct: 332 LTEGDDQNDPIADAARAILDGHVVLSRRIAEAGRYPAIDIEASVSRLMNEIADPGQIQAA 391

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                +   +++ RD+  +G Y+ G D  +D A+   P +  +L Q   +      F+E 
Sbjct: 392 RLFKQIYATYQQNRDLISVGAYQKGADPRVDAAIQYYPHLEQYLSQDMREAVD---FKES 448

Query: 434 TKKL 437
            + L
Sbjct: 449 LRAL 452


>gi|116611262|gb|ABK03986.1| ATP synthase F1 subcomplex alpha subunit [Arthrobacter sp. FB24]
          Length = 556

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 94/446 (21%), Positives = 180/446 (40%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G +++       V  L   V   + +  +      LG    
Sbjct: 25  ALNEFAASYEPGNAERVEVGRVTTAGDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 80

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  + +  +G    I  G  V   G+   +     + GRV++ LG+PID    + K +
Sbjct: 81  LDVREIGVIVLGDFTGIEEGQEVHRTGQVLSVPVGDAFLGRVVDPLGQPIDDLGEI-KAE 139

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 140 TTRALELQAPGVTQRKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKSAIAIDTII 199

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A     D       I   +G++   +    +    +   + + +V + + +    + 
Sbjct: 200 NQKANWASGDVTKQVRCIYVAIGQKASTIAAVRQTLEDNGALEYTTIVASPASDPAGFKY 259

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 260 LAPYAGSAIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 319

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 320 LLERCAKLSDELGAGSMTGLPLIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 379

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   RD++    +   +D    + + + 
Sbjct: 380 VDVGVSVSRVGGAAQVKSMKKVSGTLKLELAQY---RDMQAFAMFASDLDAASRQQLTRG 436

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    E+    I  
Sbjct: 437 ARLMELLKQGQYSPFPVENQVVSIWA 462


>gi|237750216|ref|ZP_04580696.1| flagellum-specific ATP synthase [Helicobacter bilis ATCC 43879]
 gi|229374110|gb|EEO24501.1| flagellum-specific ATP synthase [Helicobacter bilis ATCC 43879]
          Length = 455

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 169/437 (38%), Positives = 249/437 (56%), Gaps = 9/437 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQV 62
           ++E L Q     + NL    G I S+ +       LS  V  GD V + +G ++   G V
Sbjct: 18  SIENLKQKL-SLTTNLSPNFGEIISVETNIIKAVGLSPSV--GDVVWLIRGNDTRTEGIV 74

Query: 63  IRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           I  + ++  I P    E    GD V        I       GRVIN LG P+D   +L  
Sbjct: 75  IATHKEVFSISPFSFTEGFKSGDRVMIAKEGLNIPVGDELLGRVINPLGVPLDSLGALYA 134

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +  I++    A+ R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 135 SACT-PIINAPISALKRGLIDEVFSVGVKSIDSLLTCGKGQKMGIFAGSGVGKSTLMGMI 193

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            +       +++L+GERGREV EFIE  LG NL+ +V+VVATSD+SP++RK    +A+ I
Sbjct: 194 VKGSAAQIKVVALIGERGREVPEFIEKNLGGNLENTVLVVATSDDSPLMRKYGAFSAMAI 253

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  KG +VL I+DS+TRFA + REI    GE P ++GYP SV + LP+L+ER G  E
Sbjct: 254 AEFFKDKGHDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAGKEE 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+ITA  +VL++GD+ NDPIAD  RSILDGHI+L+R+L + G YPP++ L S SR+ 
Sbjct: 314 G-KGSITAFFTVLMEGDDLNDPIADQSRSILDGHIMLDRNLTDFGIYPPINILNSSSRVM 372

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               S + K        +    +E   +  IG Y  G D+ LD+A+ +  ++ +FL Q  
Sbjct: 373 HDIISQEHKNAARKFRRMQALLKENEVLIRIGSYHKGNDVELDEAIDKKALMEEFLGQDE 432

Query: 422 SDLSSEDVFQEITKKLQ 438
           +  SS +  + IT+ ++
Sbjct: 433 NIQSSYE--ESITQMIE 447


>gi|104782818|ref|YP_609316.1| flagellum-specific ATP synthase [Pseudomonas entomophila L48]
 gi|95111805|emb|CAK16529.1| flagellum-specific ATP synthase [Pseudomonas entomophila L48]
          Length = 451

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 231/427 (54%), Gaps = 11/427 (2%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K LE  A       + +V   G +  +  +      L     +G   +    +S      
Sbjct: 10  KRLEGYADAIRLPDQPVV--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPVQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
             +V+  + D V++ PVG    ++ G  V       R+       GRV++  G+ +DG  
Sbjct: 66  EAEVMGFSGDKVFLMPVGSIAGLAPGARVVPLDDSGRLPMGMSMLGRVLDGAGRALDGKG 125

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K +  + +   V   +NR  + +    GIR I+    +  GQR+G+FAG+G+GKS L
Sbjct: 126 GM-KAEDWVPMDGPVINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVL 184

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M       + +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +
Sbjct: 185 LGMMTCFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAM 244

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER
Sbjct: 245 YCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVER 304

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS
Sbjct: 305 AGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEAS 364

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+  +    D  +       L  R  ++RD+  +G Y  G D+  D A+   P + DF
Sbjct: 365 ISRVMPQVVDPDHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDVETDLAIALQPKLVDF 424

Query: 417 LKQSPSD 423
           L+Q   +
Sbjct: 425 LRQGLDE 431


>gi|12659357|gb|AAG60213.1| ATPase alpha subunit [Canella winterana]
          Length = 413

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/410 (22%), Positives = 165/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D +     ++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 402


>gi|167828527|ref|ZP_02459998.1| type III secretion system ATPase [Burkholderia pseudomallei 9]
          Length = 619

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 159/419 (37%), Positives = 233/419 (55%), Gaps = 11/419 (2%)

Query: 4   NLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-- 59
               LA   E     +  VV+ G +  +      V+ L   V LG+    + +    L  
Sbjct: 5   EFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQR 62

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    D+  + P    E+IS    V   GR   I       GRVI+ LG+P+DG   
Sbjct: 63  AEVVGFTRDVALLSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +++  P  M+R+ ++    TG+RV+D    L  GQR+G+FA +G+GKSTLL
Sbjct: 123 L-ASETLQPLIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLL 181

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREFIE  LG   + +SVVV ATSD S + R  A   
Sbjct: 182 GMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYA 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 242 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+
Sbjct: 302 GMGRT--GSITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSL 359

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+          +  + +  L+ +  E   +  IG Y+ G + + D+A+ +   I  F
Sbjct: 360 SRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSF 418


>gi|271500425|ref|YP_003333450.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya dadantii Ech586]
 gi|270343980|gb|ACZ76745.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Dickeya dadantii Ech586]
          Length = 460

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 145/423 (34%), Positives = 227/423 (53%), Gaps = 16/423 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIRINLDIVYICPVGIG 78
           V++ G I  I  +    +       +GD  + +   +S  L +++  +    ++  +G  
Sbjct: 31  VIRQGQILGIRGILLESSL--PNARIGDLCLIERHDHSPVLAEIVGFSPKNTFLSALGAL 88

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPID--------GDDSLGKGDLSMEIM 129
           + I+ G +V        +  S    G V++  G+P++           SL      M ++
Sbjct: 89  DGIAQGAVVTPLYQPHCVQVSEALFGSVLDGFGRPLEHGSHSAFVEPGSLSASP-PMPVI 147

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
              PP   R R+     TG+R ID    +  GQR+G+FAG+G GK+TLL+  AR+   D 
Sbjct: 148 GDAPPPTERPRIASPLPTGLRAIDGLLTIGCGQRVGIFAGAGCGKTTLLAELARNTPCDA 207

Query: 190 VIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ++  L+GERGRE+REF+  +       ++V+V +TSD S + R  A  TA  IAE F + 
Sbjct: 208 IVFGLIGERGRELREFLDHELDAQLRSRTVLVCSTSDRSSMERARAAFTATAIAEAFRAT 267

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G  VLLI+DS+TRFA + REI    GE     G P SV++ LPRL+ER G  +  +G IT
Sbjct: 268 GKQVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAG--QTRQGAIT 325

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D L S+SR        +
Sbjct: 326 ALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAIDVLMSLSRTMSNVVDTE 385

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             +  +++  L+  +++   +  +G Y+PG D + D AV+    I  FL+Q+  +  S D
Sbjct: 386 HTRNANAVRRLMAAYKQVEMLIRLGEYQPGHDALTDAAVNANDDINRFLQQAMREPQSFD 445

Query: 429 VFQ 431
             Q
Sbjct: 446 DIQ 448


>gi|34539217|gb|AAQ74492.1| F1-ATPase alpha subunit [Borya aff. sphaerocephala Conran et al.
           944]
          Length = 416

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 164/408 (40%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQIIPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|304398858|ref|ZP_07380728.1| flagellar protein export ATPase FliI [Pantoea sp. aB]
 gi|304353562|gb|EFM17939.1| flagellar protein export ATPase FliI [Pantoea sp. aB]
          Length = 456

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 156/423 (36%), Positives = 227/423 (53%), Gaps = 19/423 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ----VIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   V +  +   + +    V+  N   + + P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCVIERNDGKTISEIESEVVGFNGQKLLMMPL 82

Query: 76  GIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              + I  G  V+            +  + P     GRV++  G+P+DG  S   G    
Sbjct: 83  EEVDGILPGARVYARQNGENPQAGKQMMLGP--ELLGRVLDGSGRPLDGLPSPDTG-YRA 139

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     + R  +     TG+R I+    +  GQR+G+FAGSG+GKS LL M AR   
Sbjct: 140 PLNTPPFNPLQRTPITDVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTK 199

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F
Sbjct: 200 ADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 259

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 260 RDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIDGGG 319

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R L E G YP +D  AS+SR      
Sbjct: 320 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLGEAGHYPAIDIEASISRAMTHLI 379

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +    V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + S
Sbjct: 380 DENHYAQVRQFKQLLSSFQRNRDLVSVGAYAAGSDPMLDKAITLYPQMEAFLQQGIFERS 439

Query: 426 SED 428
             D
Sbjct: 440 DYD 442


>gi|224477091|ref|YP_002634697.1| F0F1 ATP synthase subunit beta [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254808164|sp|B9DME3|ATPB_STACT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222421698|emb|CAL28512.1| ATP synthase beta chain [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 471

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D+V    +   + I  GD V   GR   +       GRV N LG PID    + 
Sbjct: 49  ALELGDDVVRTIAMDSTDGIKRGDDVKDTGRPISVPVGDDTLGRVFNVLGDPIDNAGPIP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  + PP        +  +TGI+V+D+  P   G ++G+F G+G+GK+ L+  
Sbjct: 109 ESVPREPIHRQPPPFDELSTKVEILETGIKVVDLLAPYIKGGKVGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R    L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 SGLTMAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L E G YP VDPLA
Sbjct: 289 RI--TSTMKGSITSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLA 346

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR L       +   +   +   + ++ E +DI  I G     D      V +   I 
Sbjct: 347 STSRALEPSIVGQEHYDVARRVQATLQKYRELQDIIAILGMDELSDED-KSTVERARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|16127270|ref|NP_421834.1| flagellum-specific ATP synthase [Caulobacter crescentus CB15]
 gi|221236071|ref|YP_002518508.1| flagellum-specific ATP synthase [Caulobacter crescentus NA1000]
 gi|239977229|sp|B8H363|FLII_CAUCN RecName: Full=Flagellum-specific ATP synthase
 gi|239977230|sp|P0CAT8|FLII_CAUCR RecName: Full=Flagellum-specific ATP synthase
 gi|13424682|gb|AAK25002.1| flagellum-specific ATP synthase FliI [Caulobacter crescentus CB15]
 gi|220965244|gb|ACL96600.1| flagellum-specific ATP synthase fliL [Caulobacter crescentus
           NA1000]
          Length = 444

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 161/425 (37%), Positives = 244/425 (57%), Gaps = 11/425 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++++  +   V      + +G  V  +      L  +V+        + P G  E + 
Sbjct: 18  GRVAAVNGLLIEVRGGLTRLAVGARVEIERFGQKPLPAEVVGFRETRALLMPFGPVEGVG 77

Query: 83  LGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            G  +     G   + P+  W GR+INA G+PIDG   L +G++   + +  PPA  R R
Sbjct: 78  PGAEIRIVPEGA-VVRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTPPPPAHARGR 136

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +    G+R +++FT  C GQR+G+FAGSG+GKS LLSM A+    D V++ L+GERGR
Sbjct: 137 VGERLDLGVRSMNVFTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGR 196

Query: 201 EVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+E+    + L+++VVVVATSDE  + R+ A    + I+E+   +   VL ++DS+
Sbjct: 197 EVREFVEETLGEEGLRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQEVLCLMDSV 256

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVL 314
           TRFA + REI   +GE P  +GY  +VF+ELP+LLER GP            ITA+ +VL
Sbjct: 257 TRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVL 316

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+HN+PIAD+ R ILDGHIV+ R++AE GR+P ++ L S+SR         E+ +V 
Sbjct: 317 VDGDDHNEPIADATRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVK 376

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
               ++  +    ++  IG YR G D ++D+A+   P I  FL Q   + +S +D F  +
Sbjct: 377 GARQVMSAYSNMEELIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGML 436

Query: 434 TKKLQ 438
            + LQ
Sbjct: 437 GQILQ 441


>gi|283836158|ref|ZP_06355899.1| hypothetical protein CIT292_10583 [Citrobacter youngae ATCC 29220]
 gi|291068351|gb|EFE06460.1| ATP synthase F1, alpha subunit [Citrobacter youngae ATCC 29220]
          Length = 513

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 102/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGSPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    I    P  + RQ V++  + G + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVD-NDGFSPIEVIAPGVIERQSVDQPVQIGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTISNVVRKLEEHGALSNTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L++ D +++ A + R+++      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGIRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDEATRKQLSHGQKVTELLKQKQ 435


>gi|172062018|ref|YP_001809670.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           MC40-6]
 gi|171994535|gb|ACB65454.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           MC40-6]
          Length = 513

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 224/422 (53%), Gaps = 18/422 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+  + D +++ P  
Sbjct: 79  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFSGDRLFLMPTT 136

Query: 77  IGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+DG   L    +  
Sbjct: 137 DVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDGLGPL-ASKVDA 195

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 196 SLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 255

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A ++AEYF
Sbjct: 256 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYF 315

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 316 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 375

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS+SR      
Sbjct: 376 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALI 435

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 436 DETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 495

Query: 426 SE 427
             
Sbjct: 496 PF 497


>gi|30961790|gb|AAP40009.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 372

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 96/362 (26%), Positives = 158/362 (43%), Gaps = 10/362 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 11  GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 70

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 71  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 129

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVVV A++ +S  ++ +AP
Sbjct: 130 IDTIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVVNASASDSAAMQYLAP 189

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 190 YAGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 249

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 250 RAAKVCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 309

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E +       +   +D    K + +   +
Sbjct: 310 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERGQRM 366

Query: 414 YD 415
            +
Sbjct: 367 VE 368


>gi|315639098|ref|ZP_07894265.1| flagellum-specific ATP synthase FliI [Campylobacter upsaliensis
           JV21]
 gi|315480802|gb|EFU71439.1| flagellum-specific ATP synthase FliI [Campylobacter upsaliensis
           JV21]
          Length = 452

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 10/439 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLG 60
           +LE L +  +D  +NL    G I+ I++    +  L   V  GD V     + +N   L 
Sbjct: 2   SLEKLRKKLKD--ENLASVFGEITKISATNIEIQGLKTGV--GDIVRLISNENENLQTLA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +     Y+ P    E   +GD  F      +I  S    GRV++   KP DG  ++
Sbjct: 58  MVVEVKAQFSYLSPFSFIEGFKIGDKAFLSDAGMQIGVSDALLGRVVDPFMKPKDGKGAI 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M IM     AM R  +E+ F TG++ ID       GQ++G+FAGSG+GKSTL+ 
Sbjct: 118 EISKF-MPIMRSPIDAMKRGLIEEIFPTGVKTIDGLLTCGVGQKLGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M  ++      +I+L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+
Sbjct: 177 MIVKNSKAPVKVIALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAM 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           ++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G 
Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGK 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E  KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR
Sbjct: 297 EEG-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S   K        L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q
Sbjct: 356 VMSDIISDTHKNNARKFKRLSSLLKENEVLLRIGAYQKGSDKELDEAIMKKDLMQKFLSQ 415

Query: 420 SPSDLSSEDVFQEITKKLQ 438
           +P          E+  ++ 
Sbjct: 416 TPEQSVEFAETLELLSQIN 434


>gi|332653490|ref|ZP_08419235.1| ATP synthase F1, alpha subunit [Ruminococcaceae bacterium D16]
 gi|332518636|gb|EGJ48239.1| ATP synthase F1, alpha subunit [Ruminococcaceae bacterium D16]
          Length = 680

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 100/406 (24%), Positives = 174/406 (42%), Gaps = 14/406 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G +  +     TV  L + V  G+ V     ++   G V+ ++ + V    +G  E 
Sbjct: 200 SETGRVLEVGDGIATVRGLDRAV-YGELVEF---DTGVKGMVMDLSRETVGCVLLGREEG 255

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GRV++A+G+PIDG   +   D +  I  +    ++RQ
Sbjct: 256 LGEGSRVTRTGHPADVPVGRALLGRVVDAMGRPIDGLGPIHAAD-TRPIEREASGVISRQ 314

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGE 197
            V    +TGI  ID   P+  GQR  +      GK+ +   ++  + D     I   +G+
Sbjct: 315 AVNVPLQTGILAIDSMIPIGRGQRELLIGDRQTGKTAIAVDTILNQKDQDVICIYVAIGQ 374

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V    +          S++V AT+ +   L+ +AP     + EYF  +G +VL++ 
Sbjct: 375 KASSVAHVRDTLQKHGAMEYSIIVSATASDPAPLQYIAPYAGAAMGEYFMEQGRDVLIVY 434

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R ++      P    YP  VF    RLLER     +E   G++TA+  + 
Sbjct: 435 DDLSKHAVAYRALSLLLKRSPGREAYPGDVFYLHSRLLERACRLTEEYGGGSMTAIPIIE 494

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G+ P V+   SVSR+   A +   K+   
Sbjct: 495 TQAGDVSAYIPTNVISITDGQIYLETDLFFSGQRPAVNVGLSVSRVGGAAQTRAIKRTAG 554

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   + RF E     +   +   +D    K +     + + LKQ 
Sbjct: 555 TMRIDLARFRELE---VFTQFSSDLDQATQKTLDHGKRLLELLKQP 597


>gi|227874288|ref|ZP_03992476.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227839862|gb|EEJ50304.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 464

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 109/422 (25%), Positives = 196/422 (46%), Gaps = 16/422 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +     +   L + +  Q  +++ + +V  ++  D+V    +   + +
Sbjct: 7   GKVIQVMGAVLDIRFQEGELPSLLNAISIQLGDTELIAEVAQQLGDDVVRCIAMSSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG P+D   +  + +    I    P    +  
Sbjct: 67  VRGMEAVDTGNPITVPVGEPCLGRIFNILGNPVDEKPA-PETEERWAIHRPAPSFEEQTP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       IS+   VGE
Sbjct: 126 ATEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGISVFTGVGE 185

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R    L+ +T+AEYF   K  +VLL 
Sbjct: 186 RTREGNDLYGEMKESGVLDKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKHQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGALQERI--TSTKQGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+   +    +  ++  
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRDIASKGIYPAVDPLDSTSRILTPEIVGEEHYQVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +  ++ R++E +DI  I G     +     +V +   I +FL QS    S  + F  + 
Sbjct: 364 GVQQVLQRYKELQDIIAIMGMDELSEED-KISVFRARKIQNFLSQS---FSVAEQFTGLA 419

Query: 435 KK 436
            K
Sbjct: 420 GK 421


>gi|171321711|ref|ZP_02910628.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MEX-5]
 gi|171093012|gb|EDT38244.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MEX-5]
          Length = 517

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 224/422 (53%), Gaps = 18/422 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+  + D +++ P  
Sbjct: 83  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFSGDRLFLMPTT 140

Query: 77  IGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+DG   L    +  
Sbjct: 141 DVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDGLGPL-ASKVDA 199

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 200 SLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 259

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A ++AEYF
Sbjct: 260 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYF 319

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 320 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 379

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS+SR      
Sbjct: 380 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALI 439

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 440 DETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 499

Query: 426 SE 427
             
Sbjct: 500 PF 501


>gi|118470627|ref|YP_889190.1| F0F1 ATP synthase subunit alpha [Mycobacterium smegmatis str. MC2
           155]
 gi|158512473|sp|A0R202|ATPA_MYCS2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118171914|gb|ABK72810.1| ATP synthase F1, alpha subunit [Mycobacterium smegmatis str. MC2
           155]
          Length = 548

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/440 (21%), Positives = 171/440 (38%), Gaps = 27/440 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  +   +    EDY  +        + G +         V  L   V   + +   G  
Sbjct: 4   LTISAADIEGAIEDYVSSFSADTEREEIGTVIDAGDGIAHVEGL-PSVMTQELLEFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + ++   V    +G  E+I  G  V   G    +     + GRV+N LG+PID
Sbjct: 62  --VLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSVPVGDAFLGRVVNPLGQPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +    +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 120 GQGDI-AAETRRALELQAPSVVQRQSVSEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGK 178

Query: 175 STLLSMFARSD----------CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
           + +      +              + +   +G++G  +               + +V A 
Sbjct: 179 TAVCVDTILNQREAWLTGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP T   I +++   G +VL++ D +++ A + R I+      P    +P
Sbjct: 239 ASDAAGFKWLAPYTGSAIGQHWMYNGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG   L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELE---AFAAFASDLDA 415

Query: 402 ILDKAVHQVPIIYDFLKQSP 421
                + +   + + LKQ  
Sbjct: 416 ASKAQLDRGARLVELLKQPQ 435


>gi|330812737|ref|YP_004357199.1| ATP synthase subunit alpha [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380845|gb|AEA72195.1| putative ATP synthase, alpha chain [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 514

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 96/442 (21%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGSYQSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLNNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +     +   +G++   +   +     +     +++V A++ ESP L+ 
Sbjct: 178 ALAIDAIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIIVAASASESPALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|189462112|ref|ZP_03010897.1| hypothetical protein BACCOP_02792 [Bacteroides coprocola DSM 17136]
 gi|189431193|gb|EDV00178.1| hypothetical protein BACCOP_02792 [Bacteroides coprocola DSM 17136]
          Length = 530

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/429 (22%), Positives = 169/429 (39%), Gaps = 36/429 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  ++     +  L +     + +  +      +G V+ +  D V    +G  ++I
Sbjct: 30  EVGTVLQVSDGVARIYGL-RNAEANELLQFENG---IMGTVMNLEEDNVGAVLLGPTDQI 85

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G +V    R   I+      GRVI+ LG P+DG   +G     M +  K P  + RQ 
Sbjct: 86  KEGMIVKRTKRIASINVGESMLGRVIDPLGVPLDGRGEIGGELFEMPLERKAPGVIFRQP 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD--KVIIS 193
           V +  +TG++ ID   P+  GQR  +      GK      T+++  A  +  +    I  
Sbjct: 146 VTEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQRANYEAGNPVYCIYV 205

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VG++G  V   +           +VVV AT+ +   ++  AP     I EYF   G + 
Sbjct: 206 AVGQKGSTVASLVNALREKGAMDYTVVVAATASDPAAMQYFAPFAGAAIGEYFRDTGRHA 265

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE----------- 301
           L++ D +++ A + RE++           YP  +F    RLLER                
Sbjct: 266 LVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAAKIISQQEVAEQMND 325

Query: 302 ---------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
                    K  G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++
Sbjct: 326 LPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNQGFRPAIN 385

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  +L     ++ E         +   +D +   A+ +   
Sbjct: 386 VGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKFSSDMDPVTAMAIDRGRK 442

Query: 413 IYDFLKQSP 421
               L Q  
Sbjct: 443 NNQLLIQPQ 451


>gi|170700808|ref|ZP_02891799.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           IOP40-10]
 gi|170134295|gb|EDT02632.1| flagellar protein export ATPase FliI [Burkholderia ambifaria
           IOP40-10]
          Length = 513

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 149/422 (35%), Positives = 224/422 (53%), Gaps = 18/422 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+  + D +++ P  
Sbjct: 79  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEVVGFSGDRLFLMPTT 136

Query: 77  IGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+DG   L    +  
Sbjct: 137 DVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDGLGPL-ASKVDA 195

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 196 SLSAPSINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 255

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A ++AEYF
Sbjct: 256 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATSLAEYF 315

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 316 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 375

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +D  AS+SR      
Sbjct: 376 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALI 435

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 436 DETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 495

Query: 426 SE 427
             
Sbjct: 496 PF 497


>gi|164685642|gb|ABY66767.1| atp1 [Schoepfia sp. JKP4OCT96]
          Length = 413

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 166/414 (40%), Gaps = 23/414 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHEQRR-VEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           S    + ++ E   +  +  +   +D       ++   + +  KQ        D
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYAPLPID 406


>gi|153815543|ref|ZP_01968211.1| hypothetical protein RUMTOR_01779 [Ruminococcus torques ATCC 27756]
 gi|145847185|gb|EDK24103.1| hypothetical protein RUMTOR_01779 [Ruminococcus torques ATCC 27756]
          Length = 480

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 14/406 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + ++     ++  +  +   G+ V  +       G V  I  + +     G    
Sbjct: 6   SEVGTVITVGDGIASIYGI-DHAMYGEIVTFENG---LKGMVQDIRRNEIGCILFGSDTR 61

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           IS G  V   G R  +     + GRV+NALG+PIDG  S+ + D    I  + P  ++R+
Sbjct: 62  ISEGTKVTRTGKRAGVPVGDAYIGRVVNALGEPIDGKGSI-EADGYRPIEQEAPGIVDRK 120

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGE 197
            V    +TGI  ID   P+  GQR  +      GK+   L ++  + D     +   +G+
Sbjct: 121 SVSVPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIALDTILNQKDKDVICVYVAIGQ 180

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + +     +     ++VV +T+ +   L+ +AP     +AEYF  KG +VL++ 
Sbjct: 181 KASTVAKVVNTLKTNGALDYTIVVSSTASDCAPLQYIAPYAGTAMAEYFMYKGKDVLIVY 240

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVL 314
           D +++ A + R ++   G  P    YP  VF    RLLER      E   G+ITA+  + 
Sbjct: 241 DDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLERSSRLSDENGGGSITALPIIE 300

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P V+   SVSR+   A +   KK   
Sbjct: 301 TQAGDVSAYIPTNVISITDGQIFLESGLFAAGMRPAVNVGLSVSRVGGAAQTKAMKKASG 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           S+   + ++ E     +   +   +D    + +     + + LKQ 
Sbjct: 361 SIRIDLAQYREME---VFTQFSSDLDPATKEQLEYGSGLMELLKQP 403


>gi|7620549|gb|AAF64661.1| F1 ATPase alpha subunit [Agathis australis]
          Length = 413

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 165/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +    V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENANVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L +G     + +K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKALLGRVVDALGVPIDGKGAL-QGAERRRVEAKAPGIIERKSVHEPLQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-----------DCFDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRSHLLKGTSADSVYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++        + S++  AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQIPSEAAALEYSIINAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R++A      P    +P  VF    RL ER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMALLLRRPPGREAFPGDVFYSHSRLSERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICPETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SLKPELAQYRE---VAASAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|304408577|ref|ZP_07390198.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|307305405|ref|ZP_07585153.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
 gi|304352398|gb|EFM16795.1| ATPase, FliI/YscN family [Shewanella baltica OS183]
 gi|306911708|gb|EFN42133.1| ATPase, FliI/YscN family [Shewanella baltica BA175]
          Length = 443

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 160/411 (38%), Positives = 230/411 (55%), Gaps = 11/411 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G +  + +     T        G+  +     +    +V+ +  +   + P  +  
Sbjct: 29  VRYFGKVQEVGATLVRATL--PGAHQGELCLI---GNRLRAEVVAVKGNEALLSPFDVTA 83

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+LV   G   ++       GRV++ LG P+DG                 P  ++R
Sbjct: 84  GLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDGYG--LTATALRPNQGSAPNPLSR 141

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q ++     GIR ID       GQRIG+FA +G GKSTLL M A     D ++++LVGER
Sbjct: 142 QLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKSTLLGMIAAHCQADVIVLALVGER 201

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI  +   +   ++V+VVATSD  P+ R  A LTA TIAEYF  +G NVLL++D
Sbjct: 202 GREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLTATTIAEYFRDQGKNVLLMVD 261

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA S REIA  +GE PV+ GYP SVF  L  L+ER GP+   +G+IT + +VLV+G
Sbjct: 262 SLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERAGPAA--QGSITGIYTVLVEG 319

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           DN N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASVSR+ D+  S +++   + + 
Sbjct: 320 DNMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASVSRVMDQIVSPEQRCHAAKMR 379

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            L+  ++E + +  +G Y  G D   D+AV +   I  FL QS ++ S  +
Sbjct: 380 QLLALYQEVQLLIRVGEYVKGADKETDEAVARHQDIQQFLCQSVNEFSPYE 430


>gi|12659373|gb|AAG60221.1| ATPase alpha subunit [Nelumbo lutea]
 gi|12659379|gb|AAG60224.1| ATPase alpha subunit [Platanus occidentalis]
          Length = 413

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 165/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|91795003|ref|YP_564654.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
 gi|91717005|gb|ABE56931.1| ATPase FliI/YscN [Shewanella denitrificans OS217]
          Length = 445

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 148/427 (34%), Positives = 238/427 (55%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           +  +    G ++ +  +      +   + +GD    +G+    +  +V+  N D++ + P
Sbjct: 12  TVPVARVYGRLTRVNGLVL--EAVGCQLGMGDRCQIEGREGRLIEAEVVGFNKDVLCLMP 69

Query: 75  VGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V       ++       GRV++ LG+P+D    L          S   
Sbjct: 70  IESTHGVMPGARVIPITEPQKLMIGDGLLGRVLDGLGQPLDLLGKLTGVQQQTPSNSSYN 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P + RQ + +    GIR I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ 
Sbjct: 130 PLL-RQPISQALDVGIRAINSLLPIGRGQRLGLFAGSGVGKSMLLGMMTRFTEADVVVVG 188

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFI +    +  K++VV+ A +D +P++R  A + +  IA  F  +G  V
Sbjct: 189 LIGERGREVREFIEQTLGEEGRKRAVVIAAPADTTPLMRLRAMVLSHEIACGFRDQGKQV 248

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S F++LP L+E  G  +  +G +TA  +
Sbjct: 249 LLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAKLPHLVEMAGNGQHPQGTLTAFYT 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DP+AD+ R+ILDGH+VL+R LAE+G +P +D  ASVSRLA +  S D    
Sbjct: 309 VLTEGDDQQDPVADAARAILDGHVVLSRKLAEQGHFPAIDINASVSRLATQIASQDNLSQ 368

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQ 431
              + HL+ R+ E R++  +GGY+ G D  +D AV     I  FL+Q  ++ +S E    
Sbjct: 369 SHVVRHLLSRYNEVRELLPLGGYQAGHDQEMDLAVRHYRDIAAFLRQHMNENISREASLT 428

Query: 432 EITKKLQ 438
           ++ + ++
Sbjct: 429 QLAQLME 435


>gi|12659365|gb|AAG60217.1| ATPase alpha subunit [Pseudofumaria lutea]
          Length = 413

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 165/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILAEANALEYSILVAATASDPAPLQFIAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|30961792|gb|AAP40010.1| ATP synthase F1 alpha subunit [Helicobacter acinonychis]
          Length = 366

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 96/362 (26%), Positives = 158/362 (43%), Gaps = 10/362 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 9   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 68

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 69  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 127

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVVV A++ +S  ++ +AP
Sbjct: 128 IDTIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVVNASASDSAAMQYLAP 187

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 188 YAGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 247

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 248 RAAKVCDEKGAGSLTALPVVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 307

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  +L   + ++ E +       +   +D    K + +   +
Sbjct: 308 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQLERGQRM 364

Query: 414 YD 415
            +
Sbjct: 365 VE 366


>gi|7620543|gb|AAF64658.1| F1 ATPase alpha subunit [Magnolia grandiflora]
          Length = 413

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/410 (22%), Positives = 167/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 402


>gi|108800842|ref|YP_641039.1| F0F1 ATP synthase subunit alpha [Mycobacterium sp. MCS]
 gi|119869982|ref|YP_939934.1| F0F1 ATP synthase subunit alpha [Mycobacterium sp. KMS]
 gi|126436440|ref|YP_001072131.1| F0F1 ATP synthase subunit alpha [Mycobacterium sp. JLS]
 gi|123178313|sp|Q1B551|ATPA_MYCSS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158513066|sp|A1UJY6|ATPA_MYCSK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|158513457|sp|A3Q3B3|ATPA_MYCSJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|108771261|gb|ABG09983.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium sp. MCS]
 gi|119696071|gb|ABL93144.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium sp. KMS]
 gi|126236240|gb|ABN99640.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium sp. JLS]
          Length = 548

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 176/441 (39%), Gaps = 27/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  +   +    EDY  N        + G +         V  L   V   + +   G  
Sbjct: 4   LTISAADIQGAIEDYVANFATDTEREEIGTVIDAGDGIAHVEGL-PSVMTQELLEFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + ++   +    +G  E+I  G  V   G    +     + GRV+N LG+PID
Sbjct: 62  --VLGVALNLDEHSIGAVILGDFEKIEEGQQVKRTGEVLSVPVGDGYLGRVVNPLGQPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 120 GRGEIETTD-RRALELQAPSVVQRQGVSEPLQTGIKAIDSQTPIGRGQRQLIIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+L+     +  D     + +   +G++G  +               + +V A 
Sbjct: 179 TAVCVDTILNQRQNWETGDPNQQVRCVYVAIGQKGTTIASVRRTLEEGGAMDYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP T   IA+++   G +VL++ D +T+ A + R I+      P    +P
Sbjct: 239 ASDSAGFKWLAPYTGSAIAQHWMYDGKHVLIVFDDLTKHAEAYRAISLLLRRPPGREAFP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG   L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDELGGGSMTGLPLIETKANDISAYIPTNVISITDGQCFLETD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLDLSQYRELESFAA---FASDLDA 415

Query: 402 ILDKAVHQVPIIYDFLKQSPS 422
                + +   + + LKQ  +
Sbjct: 416 TSKAQLDRGARLVELLKQPQN 436


>gi|34539185|gb|AAQ74476.1| F1-ATPase alpha subunit [Annona muricata]
          Length = 414

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 170/409 (41%), Gaps = 23/409 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVIISLVGER 198
           + +D   P+  GQR  +      GK      T+L+    +   +        +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGNSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 SKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 401


>gi|302869580|ref|YP_003838217.1| ATP synthase F1 subunit alpha [Micromonospora aurantiaca ATCC
           27029]
 gi|315503958|ref|YP_004082845.1| ATP synthase f1, alpha subunit [Micromonospora sp. L5]
 gi|302572439|gb|ADL48641.1| ATP synthase F1, alpha subunit [Micromonospora aurantiaca ATCC
           27029]
 gi|315410577|gb|ADU08694.1| ATP synthase F1, alpha subunit [Micromonospora sp. L5]
          Length = 550

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/439 (21%), Positives = 178/439 (40%), Gaps = 27/439 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  + E +    E Y  +        + G ++        V  L       + +  +   
Sbjct: 4   LTISTEEIRGALERYVSSYTADVSREEVGTVADAGDGIAHVEGL-PSTMTNELLEFEDG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + +++  + +  +G    I  G  V   GR   +     + GRV+NALG+PID
Sbjct: 62  --TLGVALNLDVREIGVVVLGDFGGIEEGQRVKRTGRVLSVPVGDAFLGRVVNALGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +   E+  + P  M+R+ V++  +TGI+ +D  TP+  GQR  +      GK
Sbjct: 120 GLGDI-ANEGFRELELQAPNVMSRKSVDEPLQTGIKAVDAMTPIGRGQRQLIIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+L+        D     + I   +G++   +               + +V + 
Sbjct: 179 TTVALDTILNQRENWRSGDPKKQVRCIYVAIGQKASTIASIKGTLEEAGAMEYTTIVASP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +    + +AP T  +I +++   G +VL++ D +++ A + R ++      P    YP
Sbjct: 239 ASDPAGFKYLAPYTGSSIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQIFLETD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     KK+  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGTSVSRVGGAAQVKPMKKVAGSLRLNLAQYRELE---AFAAFASDLDR 415

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                + +   + + LKQ 
Sbjct: 416 ASRAQLDRGSRLVELLKQP 434


>gi|308051487|ref|YP_003915053.1| ATP synthase F1 subcomplex beta subunit [Ferrimonas balearica DSM
           9799]
 gi|307633677|gb|ADN77979.1| ATP synthase F1 subcomplex beta subunit [Ferrimonas balearica DSM
           9799]
          Length = 460

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/408 (26%), Positives = 191/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G +  +      V      V  + D +      +  + +V + +   +V    +G  
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALTVSNDGASLVLEVQQQLGGGVVRTIAMGAS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G    + G   ++       GR++N LG+PID    +G+ +    I  + P   +
Sbjct: 61  EGLRRGLKATNTGNTIQVPVGTATLGRIMNVLGEPIDEAGDIGEEE-RWSIHREAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 QSSATELLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRDIAARGIYPAIDPLDSTSRQLDPLVIGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 ARGVQSVLQRYKELKDIIAILGMDELSEED-KQTVARARKIERFLSQP 404


>gi|326203253|ref|ZP_08193118.1| ATP synthase F1, alpha subunit [Clostridium papyrosolvens DSM 2782]
 gi|325986511|gb|EGD47342.1| ATP synthase F1, alpha subunit [Clostridium papyrosolvens DSM 2782]
          Length = 505

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/423 (22%), Positives = 169/423 (39%), Gaps = 16/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E+Y   +     GY+         +  L +    G+ +  +    +  G  + 
Sbjct: 13  SIIKQQIENYDTAVKTDDVGYVLQSGDNIARIYGL-KSCMSGELLQFEN---NVFGMALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  G  V   G+  ++       GRV++ LGKP+DG   +   +
Sbjct: 69  LEEDNVGCVVLGDDRGIKEGSTVKRTGKTVQVPVGQSLVGRVVSPLGKPVDGKGDIVAEE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +    P  ++R+ V K  +TGI  +D   P+  GQR  +      GK+ +      
Sbjct: 129 YR-SVDFTAPGVIDRKSVNKPLQTGIMALDALIPIGRGQRELIIGDRQTGKTAIAVDTII 187

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   +   +        ++ S+VV +T+ +   ++ +AP     
Sbjct: 188 NQKGKDVICVYVAIGQKASTITGIVNTLEKFGAMEYSIVVSSTASDPSSVQYLAPYAGCA 247

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AE F      +VL+I D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 248 MAEDFMYRYHKDVLIIYDDLSKHAVAYRAMSLLLKRPPGREAYPGDVFYLHSRLLERAAK 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  I  +V SI DG I L   L   G+ P V+   SV
Sbjct: 308 LSDEMGGGSITALPIIETLAGDVSAYIPTNVISITDGQIYLESELFYSGQRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     +K+   L   + +F E         +   +D      + Q   + + L
Sbjct: 368 SRVGGSAQIKAMRKIAGPLRINLAQFRELE---AFAQFGSDLDKSTRDKLTQGERLVETL 424

Query: 418 KQS 420
           KQ 
Sbjct: 425 KQP 427


>gi|33440416|gb|AAQ19116.1| ATPase alpha subunit [Ottelia ovalifolia]
          Length = 381

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 94/384 (24%), Positives = 166/384 (43%), Gaps = 21/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEF---SSGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SLG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLGDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          L+  A+ +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAVDTILNQKELNAKAKENEKLYCVYVAIGQKRSTVAQLVQILSSANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
            + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER     +E   G++TA+  +     + +  I  +V  I
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVSAYIPTNVIPI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLILDKAVHQVPIIYD 415
              +   +D      +++   + +
Sbjct: 355 FAQFGSDLDAATQALLNRGARLTE 378


>gi|57505593|ref|ZP_00371520.1| flagellum-specific ATP synthase [Campylobacter upsaliensis RM3195]
 gi|57016140|gb|EAL52927.1| flagellum-specific ATP synthase [Campylobacter upsaliensis RM3195]
          Length = 450

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 167/439 (38%), Positives = 239/439 (54%), Gaps = 10/439 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH---QGKNSDNLG 60
           +LE L +  +D  +NL    G I+ I++    +  L   V  GD V     + +N   L 
Sbjct: 2   SLEKLRKKLKD--ENLASVFGEITKISATNIEIQGLKTGV--GDIVRLISNENENLQTLA 57

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V+ +     Y+ P    E   +GD  F      +I  S    GRV++   KP DG  ++
Sbjct: 58  MVVEVKAQFSYLSPFSFIEGFKIGDRAFLSDAGMQIGVSDALLGRVVDPFMKPKDGKGAI 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 M IM     AM R  +E+ F TG++ ID       GQ++G+FAGSG+GKSTL+ 
Sbjct: 118 EISKF-MPIMRSPIDAMKRGLIEEIFPTGVKTIDGLLTCGVGQKLGIFAGSGVGKSTLMG 176

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           M  ++      +I+L+GERGRE+ EFI+  LG  L  +V++VATSD+S ++RK     A+
Sbjct: 177 MIVKNSKAPVKVIALIGERGREIPEFIQKNLGGKLDNTVIIVATSDDSALMRKYGAFCAM 236

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           ++AEYF  +G +VL I+DS+TRFA + REI    GE P  +GYP SV S LP+L+ER G 
Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGK 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            E  KG ITA  +VLVDGD+ +DPIAD  RSILDGHIVL+R L + G YPP++   S SR
Sbjct: 297 EEG-KGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S   K        L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q
Sbjct: 356 VMSDIISDTHKNNARKFKRLSSLLKENEVLLRIGAYQKGSDKELDEAIMKKDLMQKFLSQ 415

Query: 420 SPSDLSSEDVFQEITKKLQ 438
           +P          E+  ++ 
Sbjct: 416 TPEQSVEFAETLELLSQIN 434


>gi|291613065|ref|YP_003523222.1| flagellar protein export ATPase FliI [Sideroxydans lithotrophicus
           ES-1]
 gi|291583177|gb|ADE10835.1| flagellar protein export ATPase FliI [Sideroxydans lithotrophicus
           ES-1]
          Length = 498

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 155/430 (36%), Positives = 232/430 (53%), Gaps = 25/430 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
             N ++  G ++ +T +      L   + +G     +  N+    +V+    D +++ P 
Sbjct: 53  QSNPLLVSGRLTKVTGLVMEAVGL--RMAVGSTCWIELPNTRIEAEVVGFAGDRLFLMPE 110

Query: 76  GIGEEISLGDLVFHWGRFR---------------------ISPSACWCGRVINALGKPID 114
              + +  G  V      R                     +       GRV++  G+P+D
Sbjct: 111 NDVQGLVPGARVTPAEPMRAPVAPGQSQLPRRRSSDLARHLPVGEHLLGRVLDGAGRPLD 170

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               L +   S  + S+    + R  +++    G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 171 QFGPLLESK-SAPLQSRPINPLERAAIKEALDVGVRAINSLLTVGRGQRMGLFAGSGVGK 229

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           S LL M AR    D +++ L+GERGREV+EFI D LG + L++SVVV A +D SP++R  
Sbjct: 230 SVLLGMMARYTSADVIVVGLIGERGREVKEFITDILGQEGLRRSVVVAAPADTSPLMRLQ 289

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
               A TIAEYF  +G NVLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP+L
Sbjct: 290 GAAYATTIAEYFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPQL 349

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE+G YP +D 
Sbjct: 350 VERAGNGAEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEQGHYPAIDI 409

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            AS+SR  +   S      V    H+   ++   D+  +G Y  G D +LD+A+   P +
Sbjct: 410 EASISRAMNHLVSPQHFLQVQRFKHMYAHYQRNHDLISVGAYVKGSDPLLDQAIQLYPHM 469

Query: 414 YDFLKQSPSD 423
             FLKQ   +
Sbjct: 470 EHFLKQGMYE 479


>gi|93007153|ref|YP_581590.1| F0F1 ATP synthase subunit alpha [Psychrobacter cryohalolentis K5]
 gi|119367959|sp|Q1Q897|ATPA_PSYCK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|92394831|gb|ABE76106.1| ATP synthase F1, alpha subunit [Psychrobacter cryohalolentis K5]
          Length = 514

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 188/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +   ++L         G I  ++     +  L +    G+ +  +G   
Sbjct: 3   QLNPAEISNLIKQRIQDLDAGATAKNEGTIVKVSDGIVQIHGL-EDAMYGEMIEFEG--- 58

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
           +  G  + +  D V    +G   ++  G   +  GR   +       GRV++ALG PIDG
Sbjct: 59  EVYGMALNLERDSVGAVVLGDFLKLQEGQKAYCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++ ++    P  ++RQ V++   TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPIN-AKMTDKVEKIAPGVIDRQSVDQPVMTGYKSVDTMIPIGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++ A+     K +   +G++   +   +         + + VVVA++ E   L+ 
Sbjct: 178 AMAIDAIIAQKSSGIKCVYVAIGQKRSTIANVVRKLEQTGALEYTTVVVASASEPAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 IAPYSGCTMGEYFRDRGEDALIVFDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNAAYVEKFTNGEVVGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SSLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D +  + +     + + +KQ      S
Sbjct: 415 DDVTREQLDHGERVTELMKQKQYQPMS 441


>gi|330876013|gb|EGH10162.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330967114|gb|EGH67374.1| flagellum-specific ATP synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 452

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 151/411 (36%), Positives = 227/411 (55%), Gaps = 13/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
           V  G +  +  +      +     +G   +    +S    +   +V+  +   V++ PVG
Sbjct: 26  VVEGRLLRMVGLTLEAEGM--RAAMGSRCMVINDDSHHPVEVEAEVMGFSGGKVFLMPVG 83

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               I+ G  V      GR          GRV++  G+P+DG   + K +  + +     
Sbjct: 84  SVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDGRSPI-KAEDWVPMDGPTI 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ 
Sbjct: 141 NPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVG 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NV
Sbjct: 201 LIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+ER G +EK  G+ITA  +
Sbjct: 261 LLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSITAFYT 320

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S +    
Sbjct: 321 VLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMAR 380

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                 L  R+++TRD+  +G Y  G D   D A+   P++  + +Q+  +
Sbjct: 381 AQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQALRE 431


>gi|189017754|gb|ACD71546.1| F1-ATPase alpha subunit [Thismia taiwanensis]
          Length = 395

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/392 (23%), Positives = 163/392 (41%), Gaps = 20/392 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           +  G+ V      S   G  + +  + V +   G    I  GDLV   G     P     
Sbjct: 6   IKAGEMVEFA---SGVKGIALNLENENVGLVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  G
Sbjct: 63  LGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRG 121

Query: 162 QRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGERGREVREFIEDYLGD 212
           QR  +      GK      T+L+    +   +      +   +G++   V + +      
Sbjct: 122 QRELIIGDRQTGKTAIAIDTILNQKQMNSKGESETLYCVYVAIGQKRSTVTQLVPILEEA 181

Query: 213 NL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++ 
Sbjct: 182 NALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSL 241

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVR 329
                P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V 
Sbjct: 242 LLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVI 301

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   +
Sbjct: 302 PITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---V 358

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                +   +D      +++   + +  KQ  
Sbjct: 359 AAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 390


>gi|34539377|gb|AAQ74572.1| F1-ATPase alpha subunit [Myristica fragrans]
          Length = 413

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 167/408 (40%), Gaps = 23/408 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILPEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 KLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 400


>gi|52843177|ref|YP_096976.1| F0F1 ATP synthase subunit alpha [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54298988|ref|YP_125357.1| F0F1 ATP synthase subunit alpha [Legionella pneumophila str. Paris]
 gi|296108665|ref|YP_003620366.1| F-type H -transporting ATPase alpha chain [Legionella pneumophila
           2300/99 Alcoy]
 gi|81601604|sp|Q5X0P1|ATPA2_LEGPA RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|81603141|sp|Q5ZR99|ATPA2_LEGPH RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|52630288|gb|AAU29029.1| F0F1-ATPase subunit alpha, ATP synthase alpha chain [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53752773|emb|CAH14208.1| hypothetical protein lpp3055 [Legionella pneumophila str. Paris]
 gi|295650567|gb|ADG26414.1| F-type H -transporting ATPase alpha chain [Legionella pneumophila
           2300/99 Alcoy]
 gi|307611868|emb|CBX01584.1| hypothetical protein LPW_32711 [Legionella pneumophila 130b]
          Length = 517

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 179/445 (40%), Gaps = 30/445 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L         V       G I S+      +  L+  V  G+ +   G     
Sbjct: 8   NPSEISELIRKKIDQFSVVSEARNEGTIVSLKDGIVRLHGLAD-VMAGEMIEFPGG---V 63

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG  
Sbjct: 64  YGLALNLERDSVGAVILGDSSTLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKG 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    +S  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK+ +
Sbjct: 124 PIESSGMS-PIEKVAPGVITRKSVDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAI 182

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +         + ++VVVA + +S  L+ +A
Sbjct: 183 AIDAIINQKGTGVKCVYVAIGQKASSVASIVRKLEEHGALEHTIVVVAGASDSAALQYIA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  +F    RLL
Sbjct: 243 PYSGCTMGEYFMERGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLL 302

Query: 295 ERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER                   + G++TA+  +     + +  +  +V SI DG I L+  
Sbjct: 303 ERAARINADEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVD 362

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A +   KKL       + +F E         +   +D 
Sbjct: 363 LFNSGVRPAINSGLSVSRVGGAAQTKIMKKLGGGTRLALAQFRELE---AFSQFASDLDD 419

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
              K + +   I + +KQ      +
Sbjct: 420 ATRKQLERGQRITELMKQKQYSPLT 444


>gi|86742390|ref|YP_482790.1| F0F1 ATP synthase subunit alpha [Frankia sp. CcI3]
 gi|108884791|sp|Q2J6N1|ATPA_FRASC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|86569252|gb|ABD13061.1| ATP synthase F1 subcomplex alpha subunit [Frankia sp. CcI3]
          Length = 552

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/414 (22%), Positives = 169/414 (40%), Gaps = 22/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +         V  L  +    + +   G     LG  + + +  +    +G  E I
Sbjct: 31  EVGRVVVTGDGIARVEGL-PHTMTNELLEFHGG---VLGLALNLEVGEIGTVILGESENI 86

Query: 82  SLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G+         + GRV++ LG+PIDG   +   + S E+  + P  + RQ 
Sbjct: 87  EEGQEVRRTGQILSAPVGDGFLGRVVDPLGRPIDGLGEIV-AEGSRELELQAPTVVQRQP 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-----LLSMFARSDCFD-----KV 190
           V++  +TGI+ ID  T +  GQR  +      GK+T     +++        D     K 
Sbjct: 146 VKEPLQTGIKAIDAMTAIGRGQRQLIIGDRQTGKTTVAIDAIINQRDNWTSGDPSKQVKC 205

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   +G++   +RE +           + +V A +DE    + +AP T   IA+++   G
Sbjct: 206 VYVAIGQKKSTIREVVNSLEEAGALAYTTIVAAPADEPAGFKYIAPYTGSAIAQHWMYNG 265

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L++ D +T+ A + R I+      P    YP  VF    RLLER      E   G++
Sbjct: 266 QHALIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSL 325

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +    ++ +  I  +V SI DG + L   L  +G  P ++   SVSR+   A   
Sbjct: 326 TGLPIIETKANDISAYIPTNVISITDGQVFLESDLFNQGVRPAINVGTSVSRVGGSAQVK 385

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             K +   L   + ++ E         +   +D      + +   + + LKQ  
Sbjct: 386 AMKSVAGRLRLDLAQYRELE---AFSAFGSDLDKASRDQLARGARLVELLKQPQ 436


>gi|42561405|ref|NP_975856.1| F0F1 ATP synthase subunit alpha [Mycoplasma mycoides subsp.
           mycoides SC str. PG1]
 gi|81697961|sp|Q6MS92|ATPA_MYCMS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|42492903|emb|CAE77498.1| ATP SYNTHASE ALPHA CHAIN [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
          Length = 525

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/434 (24%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++  E + +   +Y+K +V  + G + S+      +  L   +  G+F+       +  
Sbjct: 5   IKEISEMIEEQIRNYNKEIVQTEQGTVVSVGDGIALIYGLDNAIM-GEFLKFPN---NVY 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDS 118
           G V+ +    V    +G    I  GD+V    +           GRVINAL KPID    
Sbjct: 61  GMVLNLEESAVGAIILGDETLIREGDIVKRTNKVVETPVGDALLGRVINALSKPIDNLGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +     +  I       M R+ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 INFTK-TRPIERVATSVMARRSVSQPLETGILAIDSAIPIGKGQRELIIGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
             ++  + +   K I   +G++   + + +E          +VVV A + +   L+ ++P
Sbjct: 180 IDAIINQKNKNVKCIYVAIGQKDSTIVQVVEKLKKYGAMEYTVVVNAGASQPAPLQYLSP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              VTIAE +   G++VL+I D +++ A S R+++      P    YP  VF    RLLE
Sbjct: 240 YVGVTIAEEWMENGNDVLIIYDDLSKHAVSYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +    G+ITA+  +     + +  I  +V SI DG I L+  L  +G  P VD 
Sbjct: 300 RAARVNENYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLSSELFNQGVRPAVDI 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            +SVSR+   A     K++  +L   + ++ E     L   +   +D      + Q   I
Sbjct: 360 GSSVSRVGSAAQIKSIKQVSGTLKLELAQYYELE---LFAKFGSDLDEATKATLDQGAKI 416

Query: 414 YDFLKQSPSDLSSE 427
              L Q   +   +
Sbjct: 417 IQMLIQKQHNPLEQ 430


>gi|14715604|gb|AAK72441.1|AF283808_6 ATP synthase alpha subunit [Clostridium pasteurianum]
          Length = 500

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 102/440 (23%), Positives = 176/440 (40%), Gaps = 19/440 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E +  + +   +        V  G I  +      V  L +    G+ +      
Sbjct: 1   MNIKPEEITSIIKKQIEGYDNKVKTVDSGTIIQVGDGIARVYGL-ENCMAGELLEFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G  E I   D+V   GR   +       GRV+N LG  ID
Sbjct: 58  -NVYGMVMNLEQDNVGCVLLGDEEGIKEEDIVKSTGRVVEVPVGEEMIGRVVNGLGLSID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  S+   + +    +     + R+ V +  +TGI+ ID   P+  GQR  +      GK
Sbjct: 117 GKGSIKTSE-TRPAETIAHGVIERKSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +        I   +G++   V            +  S++V A++ +S  L+
Sbjct: 176 TAIAIDTIINQKGKDVICIYVAIGQKQSTVAHIYNTLIQKGAMDYSIIVSASAADSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTI EYF  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 FLAPYTGVTIGEYFMDQGKDVLIVYDDLSKHAVAYRTMSLLLRRPPAREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G+ITA+  +     +    I  +V SI DG I L   L    + P
Sbjct: 296 RLLERAAKLSDKLGGGSITALPIIETLAGDVTAYIPTNVISITDGQIFLESDLLYAVQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            V+   S SR++  A     K+L  +L   + ++ E   +     +   +D    K + +
Sbjct: 356 AVNSGISASRVSGSAQIKAMKQLSGTLRLELAQYRE---LAAFAQFGSDLDKESKKRLEK 412

Query: 410 VPIIYDFLKQSPSDLSSEDV 429
              + +  KQ   +    + 
Sbjct: 413 GNRLLEIFKQDQYEPMPVET 432


>gi|281418491|ref|ZP_06249510.1| ATP synthase F1, beta subunit [Clostridium thermocellum JW20]
 gi|281407575|gb|EFB37834.1| ATP synthase F1, beta subunit [Clostridium thermocellum JW20]
          Length = 464

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 117/406 (28%), Positives = 195/406 (48%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINL-DIVYICPVGIGEEI 81
           G +  I      +     +   + + +    +  D + +V++    D V    +   + +
Sbjct: 7   GTVVQIIGPVIDIRFERGKLPSIYNAIKINSEGIDIVAEVMQYTGNDTVRCVSMNSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G   ++       GRV N LG+PIDG   + K    + I  + P    ++ 
Sbjct: 67  KRGMKAVDTGEPIKVPVGKEVLGRVFNVLGEPIDGKGDV-KATTYLPIHREAPGLDEQKP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 126 VTEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +      ++K+ +V    +E P  R    LT +T+AEYF  + G +VLL 
Sbjct: 186 RSREGNDLWNEMNESGVIQKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 246 IDNIFRFIQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ D+    DE   +  
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRHIVEQGIYPAVDPLDSTSRVLDRRIVGDEHYTVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 KVQEILQRYKELQDIIAILGLDELSEED-KLIVFRARKIQRFLSQP 408


>gi|114330755|ref|YP_746977.1| flagellar protein export ATPase FliI [Nitrosomonas eutropha C91]
 gi|114307769|gb|ABI59012.1| flagellar protein export ATPase FliI [Nitrosomonas eutropha C91]
          Length = 468

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 154/436 (35%), Positives = 234/436 (53%), Gaps = 26/436 (5%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL E  +  L+   G ++ +  +      L   V     V      +    +V+  + + 
Sbjct: 21  QLIEPVNPLLI--SGTLTRVAGLVMEAVGLKLAVGTSCIVFLPN-GTSVTAEVVGFSGER 77

Query: 70  VYICPVGIGEEISLGDLVF---------HWGRFR------------ISPSACWCGRVINA 108
           +++ P G    ++ G  V            G  +            IS      GRV+N 
Sbjct: 78  LFLMPSGDIYGLTPGAKVVPVEYTGTPPRIGAIQHPRRRAADRAKHISVGPELLGRVLNG 137

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+P+D    L  G  ++ +  +    + R  +EK    G+R I+    +  GQR+G+FA
Sbjct: 138 VGEPLDRLGPLQCG-HNVPLYGRPFNPLERAPIEKILDVGVRAINTLLSVGRGQRMGLFA 196

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDES 227
           GSG+GKS LL M AR    D ++++L+GERGREV+EFIE  LG+  L +SVVV A +D S
Sbjct: 197 GSGVGKSVLLGMMARYTSADVIVVALIGERGREVQEFIETILGEEGLARSVVVAAPADTS 256

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P++R      A  IAEYF  +G +VLLI+DS+TRFA + REI+   GE P  +GYP SVF
Sbjct: 257 PLMRLHGAAYATAIAEYFRDEGKHVLLIMDSLTRFAMAQREISLAIGEPPATKGYPPSVF 316

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LP+L+ER G   +  G+ITA  +VL + D+ NDPIAD+ R+ILDGHIVL+R LA+ G 
Sbjct: 317 ARLPQLVERAGNGRRGSGSITAFYTVLAENDDPNDPIADNARAILDGHIVLSRHLADAGH 376

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D  +S+SR+     + ++         L  R++ + D+  +G Y  G D  LD+A+
Sbjct: 377 YPAIDIESSISRVMASLVTREQLGQAQRFKALYSRYQRSHDLISVGAYISGTDPQLDQAI 436

Query: 408 HQVPIIYDFLKQSPSD 423
              P +  FL+Q   +
Sbjct: 437 ALYPALESFLQQGMFE 452


>gi|89112884|gb|ABD61054.1| ATPase alpha subunit [Sterculia balanghas]
          Length = 387

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/390 (23%), Positives = 162/390 (41%), Gaps = 22/390 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 5   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 61

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 62  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 120

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 121 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 180

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 181 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 240

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 241 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 301 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 357

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +   +D      +++   + +  KQ 
Sbjct: 358 ALAQFGSDLDAATQALLNRGARLTEVPKQP 387


>gi|148137|gb|AAA24735.1| ATP synthase alpha subunit [Escherichia coli]
          Length = 513

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 181/443 (40%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A +    + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLARMPVALMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + LKQ  
Sbjct: 413 LDDATRNQLDHGQKVTELLKQKQ 435


>gi|325963828|ref|YP_004241734.1| ATP synthase F1 subcomplex subunit alpha [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469915|gb|ADX73600.1| ATP synthase F1 subcomplex alpha subunit [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 559

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 94/446 (21%), Positives = 180/446 (40%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G +++ +     V  L   V   + +  +      LG    
Sbjct: 28  ALNEFAASYEPGNAERVEVGRVTTASDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 83

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  + +  +G    I  G  V   G+   +     + GRV++ LG PID    + K +
Sbjct: 84  LDVREIGVIILGDFTGIEEGQEVHRTGQVLSVPVGDAFLGRVVDPLGVPIDDLGEI-KAE 142

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 143 TTRALELQAPGVTQRKSVHEPMQTGLKAIDAMIPIGRGQRQLIIGDRQTGKSAIAIDTII 202

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A     D       I   +G++   +    +    +   + + +V + + +    + 
Sbjct: 203 NQKANWASGDVTKQVRCIYVAIGQKASTIAAIRQTLEDNGALEYTTIVASPASDPAGFKY 262

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 263 LAPYAGSAIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 322

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 323 LLERCAKLSDELGAGSMTGLPLIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 382

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   RD++    +   +D    + + + 
Sbjct: 383 VDVGVSVSRVGGAAQVKSMKKVSGTLKLDLAQY---RDMQAFAMFASDLDAASRQQLTRG 439

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    E+    I  
Sbjct: 440 ARLMELLKQGQYSPFPVENQVVSIWA 465


>gi|307722059|ref|YP_003893199.1| flagellar protein export ATPase FliI [Sulfurimonas autotrophica DSM
           16294]
 gi|306980152|gb|ADN10187.1| flagellar protein export ATPase FliI [Sulfurimonas autotrophica DSM
           16294]
          Length = 435

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 165/426 (38%), Positives = 238/426 (55%), Gaps = 12/426 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73
           +KN  V  G +  I +   T   L  +V + D V  V      + +G V  I+ D+ +I 
Sbjct: 12  NKNYSVSFGEVVKINATIITAKGL--HVSISDMVKIVSDTTGQETVGMVTEIDADLFFIT 69

Query: 74  PVGIGEEISLGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           P    E    GD VF    G   I       GRV++   +PIDG  S+    L+  I+  
Sbjct: 70  PFSFVEGFRSGDKVFLDATG-LNIPVGPALLGRVVDPFMRPIDGKGSVKDAKLA-PIIKA 127

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
              AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +
Sbjct: 128 PIAAMKRGMIDEVFSVGVKSIDGLLSCGKGQKLGIFAGSGVGKSTLMGMIVRGADAPIKV 187

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           ++L+GERGREV EFIE  LG +L  +V+VVATSD+SP++RK     A+++AEYF  +G +
Sbjct: 188 VALIGERGREVPEFIEKNLGGDLTNTVIVVATSDDSPLMRKYGAFAAMSVAEYFKDQGRD 247

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E  KG+ITA  
Sbjct: 248 VLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAGKEEG-KGSITAFF 306

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++GD+ +DPIAD  RSILDGHIVL+R + + G YPPV  L S SR+     +    K
Sbjct: 307 TVLIEGDDMSDPIADQSRSILDGHIVLSREMTDFGIYPPVHILNSASRVMSDIITPQHLK 366

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
            V     L    +E   +  IG Y  G D  LD+A+++   +  F+ Q+    + +  F 
Sbjct: 367 AVMKFRRLYTLLKENETLIRIGAYTQGSDAELDEAINKKEDMEAFITQNS---TVQTSFS 423

Query: 432 EITKKL 437
           E ++ L
Sbjct: 424 ETSQAL 429


>gi|189017748|gb|ACD71543.1| F1-ATPase alpha subunit [Thismia aseroe]
          Length = 399

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/399 (22%), Positives = 163/399 (40%), Gaps = 20/399 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           +  G+ V      S   G  + +  + V +   G    I  GDLV   G     P     
Sbjct: 6   IKAGEMVEFV---SGVKGIALNLENENVGLVVFGSDTAIKEGDLVKRTGSIVDVPAGKAM 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  G
Sbjct: 63  LGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---------VIISLVGERGREVREFIEDYLGD 212
           QR  +      GK+ +      +               +   +G++   V + ++     
Sbjct: 122 QRELLIGDRQTGKTAIAIDTLLNQKQIHSKVESETLYCVYVAIGQKRSTVAQLVKILEEA 181

Query: 213 NL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+I+ 
Sbjct: 182 NALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQISL 241

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVR 329
                P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V 
Sbjct: 242 LLRRPPGREAFPGDVFYLHSRLLERATKRSDQTGAGSSTALPVIETQAGDSSAYIPTNVI 301

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   +
Sbjct: 302 PITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---V 358

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                +   +D      +++   + +  KQ   +    +
Sbjct: 359 AAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEPLPSE 397


>gi|34539215|gb|AAQ74491.1| F1-ATPase alpha subunit [Blandfordia grandiflora]
          Length = 416

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 163/408 (39%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANAFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|34539415|gb|AAQ74591.1| F1-ATPase alpha subunit [Pleea tenuifolia]
          Length = 417

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/412 (22%), Positives = 168/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGXNE-IQAGEMVEFA---SGVKGIALNLENEBVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG  IDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVXIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +     +   +D +     ++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 404


>gi|270158435|ref|ZP_06187092.1| ATP synthase F1 subunit alpha [Legionella longbeachae D-4968]
 gi|289166726|ref|YP_003456864.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Legionella
           longbeachae NSW150]
 gi|269990460|gb|EEZ96714.1| ATP synthase F1 subunit alpha [Legionella longbeachae D-4968]
 gi|288859899|emb|CBJ13885.1| F1 sector of membrane-bound ATP synthase, alpha subunit [Legionella
           longbeachae NSW150]
          Length = 517

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/445 (23%), Positives = 182/445 (40%), Gaps = 30/445 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L     ++  V       G I S+     ++  L + V  G+ +   G     
Sbjct: 8   NPSEISELIRKKIEHFSVVSEARNEGTIVSLKDGVVSLHGL-EDVMAGEMIEFPGG---T 63

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG  
Sbjct: 64  YGLALNLERDSVGAVVLGEYSSLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKG 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    +S  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK+ +
Sbjct: 124 PIEASGMS-PIEKVAPGVIARKSVDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAI 182

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
                 +      K I   VG++   V   +      D L+ ++VVVA + +S  L+ +A
Sbjct: 183 AIDAIINQKGTGVKCIYVAVGQKASSVAAIVRKLEEHDALEHTIVVVAGASDSAALQFIA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF   G++ L++ D +T+ A + R+I+      P    YP  +F    RLL
Sbjct: 243 PYAGCTMGEYFMEHGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLL 302

Query: 295 ERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER                   + G++TA+  +     + +  +  +V SI DG I L+  
Sbjct: 303 ERAARINADEVEKLTHGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVD 362

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A +   KKL       + +F E         +   +D 
Sbjct: 363 LFNSGVRPAINSGLSVSRVGGAAQTKIMKKLGGGTRLALAQFRELE---AFSQFASDLDD 419

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
              K + +   I + +KQ      S
Sbjct: 420 ATRKQLERGQRITELMKQKQYSPLS 444


>gi|212709509|ref|ZP_03317637.1| hypothetical protein PROVALCAL_00551 [Providencia alcalifaciens DSM
           30120]
 gi|212687847|gb|EEB47375.1| hypothetical protein PROVALCAL_00551 [Providencia alcalifaciens DSM
           30120]
          Length = 454

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 157/428 (36%), Positives = 234/428 (54%), Gaps = 18/428 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIRINLDIVYIC 73
            +V + G ++ IT +      +   + LG       +  G   + + +V+  N + + + 
Sbjct: 23  PMVRRYGRLTKITGLVMEAEGI--KMPLGATCYIERIINGGTDEVVCEVVGFNGNRMLLM 80

Query: 74  PVGIGEEISLGDLVFH--------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
           P+   E IS G  V+           R  +       GRV++A G P+DG   L +    
Sbjct: 81  PLSDLEGISPGARVYAQSSGDDGQTSRL-LPLGNELLGRVLDAQGTPLDGKGPL-ETKQR 138

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +++     + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR  
Sbjct: 139 APLITPSINPLERTPIHDILDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGMMARFT 198

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D +++ L+GERGREV++FIE+ LG D L+++VVV A +D SP+LR      A  IAEY
Sbjct: 199 QADIIVVGLIGERGREVKDFIENILGADGLRRAVVVAAPADVSPLLRMQGASYATRIAEY 258

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP L+ER G  +   
Sbjct: 259 FRDQGKSVLLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGKN-G 317

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR   + 
Sbjct: 318 GSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTEL 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              D  + +     L   ++  RD+  +G Y  G D +LD A+   P +  FL+Q   + 
Sbjct: 378 IEKDHYRKIQRFKQLTSSYQRNRDLINVGAYAMGSDPMLDTAIQYYPRMSKFLQQDIDER 437

Query: 425 SSEDVFQE 432
                  E
Sbjct: 438 CDYQTACE 445


>gi|160893775|ref|ZP_02074559.1| hypothetical protein CLOL250_01329 [Clostridium sp. L2-50]
 gi|156864760|gb|EDO58191.1| hypothetical protein CLOL250_01329 [Clostridium sp. L2-50]
          Length = 502

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 104/420 (24%), Positives = 178/420 (42%), Gaps = 15/420 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L    E++  +    + G +  +     T+  +      G+ VV +       G V  I 
Sbjct: 13  LKSEIENFDFDTRDKEVGTVIWVGDGIVTIYGI-DNAMYGEIVVFENG---IKGMVQDIR 68

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              +     G    I  G  V   G R  +     + GR+INALG PIDG  ++ + D  
Sbjct: 69  RTEIGCILFGKDTGIKEGTKVTRTGKRAGVPVGEEFLGRIINALGAPIDGKGAIKEADY- 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M +  + P   +RQ V +  +TGI  ID   P+  GQR  +      GK+++      + 
Sbjct: 128 MPVEQEAPSIADRQSVNEPLQTGILSIDSMFPIGKGQRELIIGDRQTGKTSIALDTIINQ 187

Query: 186 CF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V + +      D +  +++V +T+ +   L+ +AP    ++A
Sbjct: 188 RGKDVVCIYVAIGQKASTVAKIVSTLEKNDAMDYTIIVASTASDPAPLQYIAPYAGTSMA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER    + 
Sbjct: 248 EYFMHKGKDVLIVYDDLSKHAVAYRTLSLLLGRSPGREAYPGDVFYLHSRLLERSSKLKD 307

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVSR+
Sbjct: 308 SLGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSVSRV 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK   ++   + +F E     +   +   +D    + +     + + LKQ 
Sbjct: 368 GGAAQTKAMKKATGTVRIDLAQFREME---VFTQFSSDLDENTKEQLTYGKGLMELLKQP 424


>gi|156093675|ref|XP_001612876.1| ATP synthase alpha chain [Plasmodium vivax SaI-1]
 gi|148801750|gb|EDL43149.1| ATP synthase alpha chain, putative [Plasmodium vivax]
          Length = 564

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 102/451 (22%), Positives = 181/451 (40%), Gaps = 35/451 (7%)

Query: 6   ETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ------------ 52
           + L +  E +  K    + GY+ S+         L+  V   + +               
Sbjct: 42  KILEKKFEQFDFKTSANEVGYVLSVGDGICRAFGLN-NVKSSELLEIHNSDASDSSGGAA 100

Query: 53  ---GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINA 108
              G ++   G    +  D V +   G    I  GD++    R           GRV++ 
Sbjct: 101 NQGGASNVTYGMATNLEYDNVGVVIFGNDRNIREGDIIKRTNRIIDVCVGHELLGRVVDG 160

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG  IDG   +   +   +I  K P  + R+ V +   TGI+ ID   P+  GQR  +  
Sbjct: 161 LGNEIDGGKPIQTSE-KRKIEIKAPGIIARKSVNESIITGIKCIDSLVPIGRGQRELIIG 219

Query: 169 GSGIG----------KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217
               G              ++     +     I   +G++   + + +      D LK +
Sbjct: 220 DRQTGKTAIAVDTIIHQKNINEQVPDNEKVYCIYVAIGQKKSNIAKLVNLLKKYDALKYT 279

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           ++V +++ ++  L+ +AP T   +AEYF   G + L+I D +++ A + R+++      P
Sbjct: 280 IIVNSSASDASPLQFLAPYTGCAMAEYFRDNGKHALIIFDDLSKQAVAYRQLSLLLRRPP 339

Query: 278 VARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               YP  +F    +LLER        + G++TA+  +    ++ +  I  +V SI DG 
Sbjct: 340 GREAYPGDIFYIHSKLLERSSKLNDSLKGGSLTALPIIETLNNDVSAYIPTNVISITDGQ 399

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KKL SS+   + +F E   I     +
Sbjct: 400 IFLESELFYKGIIPAINVGLSVSRIGSSAQYKCMKKLASSMKLELAQFRE---IVAFSQF 456

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              +D    K + +  I+ + LKQ      S
Sbjct: 457 GSDLDASTKKLIEKGKILTEILKQKQYSPVS 487


>gi|11467065|ref|NP_042541.1| H(+)-transporting ATPase, subunit 1 [Acanthamoeba castellanii]
 gi|6647460|sp|Q37380|ATPAM_ACACA RecName: Full=ATP synthase subunit alpha, mitochondrial
 gi|562046|gb|AAD11834.1| H(+)-transporting ATPase, subunit 1 [Acanthamoeba castellanii]
          Length = 522

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 174/412 (42%), Gaps = 21/412 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I SI      +  LS  V  G+ +     ++D  G  + +N + V     G   +I  
Sbjct: 32  GVIKSIVDGVVIIEGLS-NVKAGEMLQF---SNDIQGMALNLNSETVSAVLFGDETKIKP 87

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G+ V   G    +       GRV+NALG+PID        +L  ++  K P  + RQ V 
Sbjct: 88  GEYVEGTGNIISVPVGMSLLGRVVNALGQPIDNKGDFPGSELK-QVEVKAPGIITRQSVN 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---------STLLSMFARSDCFDKVIIS 193
           +   TG++ ID   P+  GQR  V      GK         +               I +
Sbjct: 147 EPMITGVKAIDCLVPVGRGQRELVIGDRQTGKTSICLDAVLNQKYENSKNKKNALYCIYT 206

Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   + + +      ++L+ S++V AT+ E+  L+ +AP T   I EYF   G + 
Sbjct: 207 AIGQKRSSISKLVTLLEKTNSLEYSIIVAATASEAAPLQYLAPYTGCVIGEYFRDNGKHA 266

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAV 310
           L+I D +++ A + R+++      P    YP  +F    RLLER     K    G++TA+
Sbjct: 267 LIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDIFYLHSRLLERAAKLNKNFGGGSLTAL 326

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
             V     + +  I  +V SI DG I L  +L   G  P V+   SVSR+   A     K
Sbjct: 327 PVVETQAGDVSAYIPTNVISITDGQIFLETNLFYNGIRPAVNVGLSVSRVGSAAQILAIK 386

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           KL  SL   + ++ E         +   +D      + +  ++ + L Q+  
Sbjct: 387 KLAGSLKLELAQYREA---LSFAQFGSDLDETTKNLLSRGNMLTELLNQNRF 435


>gi|156530189|gb|ABU75191.1| AtpB [Simaba ferruginea]
          Length = 495

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|284992518|ref|YP_003411072.1| ATP synthase F1 subunit alpha [Geodermatophilus obscurus DSM 43160]
 gi|284065763|gb|ADB76701.1| ATP synthase F1, alpha subunit [Geodermatophilus obscurus DSM
           43160]
          Length = 545

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/438 (21%), Positives = 172/438 (39%), Gaps = 23/438 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +     +YS ++  +  G ++        V  L   V   + +  +   S   G  + 
Sbjct: 13  SAIQNYVTEYSPDVSREEVGIVTEAGDGIARVEGL-PSVMTNELLEFE---SGVRGLALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  V +  +G    I  G  V   G    +     + GRV++ LG PIDG   +    
Sbjct: 69  LDVREVGVVILGDYAGIEEGQQVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGAGPVTTT- 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  + P  + RQ V +  +TGI+ ID  TP+  GQR  V      GK+ +++    
Sbjct: 128 GRRALELQAPTVVQRQSVHEPMQTGIKAIDAMTPIGRGQRQLVIGDRQTGKTAIVTDTII 187

Query: 184 S----------DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +              + I   VG++G  +               + +V A + E+   + 
Sbjct: 188 NQKQAWATGDPAQQVRCIYVAVGQKGSTIAAIRASLEEAGAMEYTTIVAAPASEAAGFKY 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 248 IAPYTGSAIGQHWMYEGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  V   G++ +  I  +V SI DG I L   L   G  P 
Sbjct: 308 LLERCAKLSDELGAGSMTGLPLVETKGNDVSAYIPTNVISITDGQIFLETGLFNSGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K +   L   + ++ E         +   +D      + + 
Sbjct: 368 INVGISVSRVGGSAQIKAMKSVAGRLRLDLAQYRELE---AFASFSSDLDASSRATLERG 424

Query: 411 PIIYDFLKQSPSDLSSED 428
             + + LKQ        +
Sbjct: 425 QRLVELLKQGQYQPYPVE 442


>gi|3273592|gb|AAC24778.1| F1-ATPase alpha subunit [Tacca leontopetaloides]
          Length = 421

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 164/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAILGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKDINSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF     + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNNMHELI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      + G  + TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAXSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I  G I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITHGQICSETXLFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|34539167|gb|AAQ74467.1| F1-ATPase alpha subunit [Agave ghiesbreghtii]
          Length = 395

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 163/403 (40%), Gaps = 23/403 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              + ++ E   +     +   +D       ++   + +  KQ
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQ 395


>gi|156530193|gb|ABU75193.1| AtpB [Simaba guianensis]
          Length = 495

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|149190476|ref|ZP_01868747.1| F0F1 ATP synthase subunit alpha [Vibrio shilonii AK1]
 gi|148835730|gb|EDL52696.1| F0F1 ATP synthase subunit alpha [Vibrio shilonii AK1]
          Length = 513

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 102/456 (22%), Positives = 190/456 (41%), Gaps = 32/456 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   ++          G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIESFDVVSEARNEGTIVSVSDGIIRIHGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPELLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +     IGK
Sbjct: 117 GKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQIGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +         + ++VVVA++ ES  L+
Sbjct: 176 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
                  G  P VDP  SVSR+   A +   KKL   +   +  + E   +     +   
Sbjct: 356 QTEAFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    + +     + + +KQ     +   VF +  
Sbjct: 413 LDEATKRQLSHGQKVTELMKQKQ--YAPMSVFDQAL 446


>gi|3273586|gb|AAC24775.1| F1-ATPase alpha subunit [Molineria capitulata]
          Length = 421

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAMNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRTMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|257064829|ref|YP_003144501.1| ATP synthase F1 subcomplex alpha subunit [Slackia
           heliotrinireducens DSM 20476]
 gi|256792482|gb|ACV23152.1| ATP synthase F1 subcomplex alpha subunit [Slackia
           heliotrinireducens DSM 20476]
          Length = 520

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 99/435 (22%), Positives = 176/435 (40%), Gaps = 25/435 (5%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVI 63
           E L +  E    ++   + G +  +      V  L +    G+ +   G       G   
Sbjct: 11  EALRKQLESLETSVDAREVGTVVQVGDGIARVDGL-KGAMAGELLEFLGADGKVVYGLAQ 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKG 122
            +  D V    +G    I   D V   G+    PS     GRV+N LG PIDG   +   
Sbjct: 70  NLEEDEVGAVLMGDVTAIRENDQVRTTGKIMEVPSGKGMLGRVVNPLGMPIDGKGPITP- 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  K P  ++R+ V +   TG+  +D   P+  GQR  +      GK+ +     
Sbjct: 129 EGYRPVEFKAPGVISRKPVHEPMDTGVLAVDSMVPIGRGQRELIIGDRQTGKTAIAIDAI 188

Query: 183 RSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   VG++   V   +E          +++V AT+ +S  L+ +AP+   
Sbjct: 189 INQRGKDMICIYVAVGQKASTVAGVMETLEKYGAMEYTIIVSATASDSAPLQYIAPMAGA 248

Query: 240 TIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + EYF   G+            +VL+I D +++ A + R+++      P    YP  +F
Sbjct: 249 AMGEYFVYTGENGEPAGPENEGRHVLIIYDDLSKQAVAYRQMSLTLRRPPGREAYPGDIF 308

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      E  +G++TA+  +     + +  I  +V SI DG I L+  L  +
Sbjct: 309 YLHSRLLERAVKMSDEYGRGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLSTDLYFQ 368

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G+ P ++   SVSR+   A +   K +  +L   +  + E +       +   +D     
Sbjct: 369 GQRPAINVGLSVSRVGGSAQTKAVKSVSGTLRLDLASYRELQ---AFTQFGSDLDKSTQD 425

Query: 406 AVHQVPIIYDFLKQS 420
            +++   + + LKQ 
Sbjct: 426 QLNRGARMTELLKQG 440


>gi|171191283|gb|ACB45109.1| AtpB [Simarouba berteroana]
          Length = 495

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|1334356|emb|CAA42840.1| adenosinetriphosphatase [Chlamydomonas reinhardtii]
          Length = 454

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 10/377 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            LG  + +  + V    +G G +I+ G  V   G+   I     + GRV++ L +P+DG 
Sbjct: 6   TLGIALNLEANNVGAVLLGDGLKITEGSRVRCTGKIAEIPVGEAYLGRVVDGLARPVDGK 65

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
            ++   D S  I S  P  + R+ V +   TG+  +D   P+  GQR  +      GK+ 
Sbjct: 66  GAVQTKD-SRAIESPAPGIVARRSVYEPLATGLVAVDAMIPVGRGQRELIIGDRQTGKTA 124

Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
           +   ++  +       +   +G++   V + +           +++V+A ++E   L+ +
Sbjct: 125 IAVDTILNQKGKGVICVYVAIGQKASSVAQVLNTLKERGALDYTIIVMANANEPATLQYL 184

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T  T+AEYF   G   L I D +++ A + RE++      P    YP  VF    RL
Sbjct: 185 APYTGATLAEYFMYTGRPTLTIYDDLSKQAQAYREMSLLLRRPPGREAYPGDVFYLHSRL 244

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER         +G++TA+  V     + +  I  +V SI DG I L   L   G  P +
Sbjct: 245 LERAAKLNNALGEGSMTALPIVETQEGDVSAYIPTNVISITDGQIFLAAGLFNSGLRPAI 304

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     K++   L   + +F E         +   +D      + +  
Sbjct: 305 NVGISVSRVGSAAQPKAMKQVAGKLKLELAQFAELE---AFSQFASDLDQATQNQLARGA 361

Query: 412 IIYDFLKQSPSDLSSED 428
            + + LKQ  S   S +
Sbjct: 362 RLREILKQPQSSPLSVE 378


>gi|297183580|gb|ADI19707.1| hypothetical protein [uncultured bacterium EB000_36F02]
          Length = 473

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 183/411 (44%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++ +      V   ++   +   +  + G N   L     +    V    +   E + 
Sbjct: 5   GKVTQVIGAVVDVKFENKLPKILTALECKIGDNRLVLEVAQHLGESNVRTIAMDGTEGLK 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            GD V   G   ++       GR+IN +G+PID    +   D S  I    P    +   
Sbjct: 65  RGDEVIDTGTPIKVPVGPETLGRIINVIGEPIDQKGPIKTKD-SWPIHRPAPLFTEQSTE 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         + + VGER
Sbjct: 124 TEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELINNIAKAHGGFSVFAGVGER 183

Query: 199 GREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +   +        K+ +V    +E P  R    LT +T+AEYF  +   
Sbjct: 184 TREGNDLYHEMIESGVIKPDGKGSKAALVYGQMNEPPGARSRVGLTGLTVAEYFRDQEGQ 243

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 244 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITSV 301

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     D  
Sbjct: 302 QAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGDEH 361

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 362 YRVAREVQKILQTYKSLQDIIAILGMDELSEED-KLTVTRARKIQRFLSQP 411


>gi|156530197|gb|ABU75195.1| AtpB [Simaba insignis]
          Length = 498

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34539333|gb|AAQ74550.1| F1-ATPase alpha subunit [Illicium anisatum]
          Length = 416

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/412 (22%), Positives = 167/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 404


>gi|119776776|ref|YP_929516.1| F0F1 ATP synthase subunit beta [Shewanella amazonensis SB2B]
 gi|166222412|sp|A1SBU0|ATPB_SHEAM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119769276|gb|ABM01847.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B]
          Length = 462

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ + N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQHAVPQVYDALKITGEGTCN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+P+D    +G+ D    I    P 
Sbjct: 60  GSSDGLRRGIEVENTGSAIAVPVGKATLGRIMNVLGEPVDEAGPIGEED-RYVIHRAAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEEQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  + +   +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMMESGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGK 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + + +++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQNVLQRYKELKDIIAILGMDELSDDD-KMTVSRARKIERFLSQP 406


>gi|302388469|ref|YP_003824291.1| ATP synthase F1, alpha subunit [Clostridium saccharolyticum WM1]
 gi|302199097|gb|ADL06668.1| ATP synthase F1, alpha subunit [Clostridium saccharolyticum WM1]
          Length = 502

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/423 (25%), Positives = 177/423 (41%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L    EDY  +    + G + S+     TV  + +    G+ V+         G V 
Sbjct: 10  ISILRSEIEDYDAHARDQEVGTVISVGDGIATVYGIDR-AMYGEIVIFDNG---IKGMVQ 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + +     G   ++  G  V     R  I     + GRV+NALG PIDG   +   
Sbjct: 66  DIRREDIGCILFGPDRDVKEGSKVTRTKKRAGIPVGNGFVGRVVNALGAPIDGKGEIISD 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSM 180
           D    I  + P  ++R+ V    +TGI  ID   P+  GQR  +      GK+   + ++
Sbjct: 126 DYR-PIEQEAPGIIDRKSVSVPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAIDAI 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             +       +   VG++   V + +        ++ ++VV +T+ E   L+ +AP    
Sbjct: 185 LNQKGKGVICVYVAVGQKASTVAKLVNTLTHYGAMEYTIVVSSTASEPAPLQFIAPYAGT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYKGTDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 305 LSEEAGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   SL   + +  E     +   +   +D    + +     + + L
Sbjct: 365 SRVGGAAQTKAMKKAAGSLRIDLAQCREME---VFTQFSSDLDPATKEQIQYGKGLTELL 421

Query: 418 KQS 420
           KQ 
Sbjct: 422 KQP 424


>gi|197104319|ref|YP_002129696.1| flagellum-specific ATP synthase FliI [Phenylobacterium zucineum
           HLK1]
 gi|196477739|gb|ACG77267.1| flagellum-specific ATP synthase FliI [Phenylobacterium zucineum
           HLK1]
          Length = 449

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 164/442 (37%), Positives = 244/442 (55%), Gaps = 13/442 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIR 64
           ++L    E      V   G ++++  +          + +G          D L  +V+ 
Sbjct: 2   QSLVAAVERLDPLTV--SGRVAAVNGLLIEARGGLTRLAVGARAEIARFGHDPLAAEVVG 59

Query: 65  INLDIVYICPVGIGEEISLGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                  + P G  E ++ G  +     G   + P+  W GR ++A G PIDG   L +G
Sbjct: 60  FRDTRALLMPFGPVEGVAPGAEIRIEPQGS-AVRPTRAWLGRTVDAFGNPIDGKGPLPQG 118

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             S  + +  P A  R RV +    G+R +++FT  C GQR+GVFAGSG+GKS LLSM A
Sbjct: 119 LASYPLRAPPPAAHARARVGERLDLGVRAMNVFTTCCRGQRLGVFAGSGVGKSVLLSMLA 178

Query: 183 RSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D V++ L+GERGREVREFIE+    + LK+++VVVATSDE  + R+ A    + I
Sbjct: 179 KNADCDAVVVGLIGERGREVREFIEETLGEEGLKRAIVVVATSDEPALKRRQAAYMTMAI 238

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+   +   VL ++DS+TRFA + REI   +GE P  +GY  +VF+ELP+LLER GP  
Sbjct: 239 AEFLRDQDLEVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGP 298

Query: 302 -----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
                   G IT + +VLVDGD+HN+PIAD+VR ILDGHIV+ R++AE GR+P ++ L S
Sbjct: 299 IRPDGTRAGPITGLFTVLVDGDDHNEPIADAVRGILDGHIVMERAIAERGRFPAINVLKS 358

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR         E+++V      +  +    ++  IG YR G D ++D+A+   P +  F
Sbjct: 359 ISRTMPGCQQPHEREVVKQARQALSAYANMEELIRIGAYRAGADPLIDRAIELNPSLEAF 418

Query: 417 LKQSPSDLSS-EDVFQEITKKL 437
           L Q P D +  E+ F  +   L
Sbjct: 419 LSQDPDDATGLEESFAGLAMIL 440


>gi|167835053|ref|ZP_02461936.1| flagellar protein export ATPase FliI [Burkholderia thailandensis
           MSMB43]
          Length = 523

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 149/432 (34%), Positives = 224/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+    + +++ P  
Sbjct: 89  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSALPYAQAEVVGFAGERLFLMPTT 146

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GR+++A G+P+D    L    +  
Sbjct: 147 AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRIVDASGRPLDNLGPL-ASKVDA 205

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 206 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 265

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 266 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 325

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 326 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 385

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR      
Sbjct: 386 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASISRAMTALI 445

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                + V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 446 DDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 505

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 506 PYAPSLAALDAL 517


>gi|84785902|gb|ABC62090.1| secretion and cellular translocation protein N [Chlamydophila
           psittaci]
          Length = 442

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 157/444 (35%), Positives = 249/444 (56%), Gaps = 15/444 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-SDNL 59
           +  + ++L     D     VV  G I+ +  +   +  +   V +G+  + +       +
Sbjct: 4   LTTDFDSLMTQLNDVHLTTVV--GRITEVVGML--IKAVVPNVRVGEVCLVKRYGMEPLV 59

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--D 116
            +V+    +  ++ P+G    +S    V   G    I       GRV+N LG+PID    
Sbjct: 60  TEVVGFTQNFAFLSPLGELTGVSPASEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEIK 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   + +  +    P  ++R+++     TG+R ID    +  GQRIG+FAG+G+GKS+
Sbjct: 120 GPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSS 179

Query: 177 LLSMFARSDC-FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMA 234
           LL M AR+    D  +I+L+GERGREVREFIE D   + +K+SV+VV+TSD+S  LR  A
Sbjct: 180 LLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
                 IAEYF  +G  V+L++DS+TRFA ++RE+   +GE P   GY  SVFS LPRLL
Sbjct: 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPRLL 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G S+K  G ITA  +VLV GD+  +P+AD V+SILDGH+V + +LA+   YP +D L
Sbjct: 300 ERSGASDK--GTITAFYTVLVAGDDMKEPVADEVKSILDGHVVSSNALAQAYHYPAIDVL 357

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SRL       ++++++     +  +++    +  IG YR G D  +D A+  +  + 
Sbjct: 358 ASISRLLTAIVPEEQRRIIGKAREVWGKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLN 417

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FLKQ   + ++   ++E +++L+
Sbjct: 418 RFLKQDIHEKTN---YEEASQQLR 438


>gi|12659389|gb|AAG60229.1| ATPase alpha subunit [Trimenia sp. CCWD-2000]
          Length = 413

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFIAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I L   L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQIRLETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|330813464|ref|YP_004357703.1| ATP synthase beta chain [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486559|gb|AEA80964.1| ATP synthase beta chain [Candidatus Pelagibacter sp. IMCC9063]
          Length = 474

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 183/412 (44%), Gaps = 18/412 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I+ +      V        +   +         + +V   +  + V    +   E +
Sbjct: 5   FGTITQVIGAVVDVKFEENLPEILTALECDNSGIRLVLEVAQHLGENTVRTIAMDTTEGL 64

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V + G   R+       GR++N +G+PID    + K   +  I    P  + +  
Sbjct: 65  KRGDKVTNTGSSIRVPVGPETLGRIMNVIGEPIDERGPI-KTKENWPIHRAAPSFVEQST 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 ETEVLVTGIKVVDLLAPYSRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +   +        K+ +V    +E P  R    L+ +T+AEYF  +  
Sbjct: 184 RTREGNDLYHEMMESGVIKLDGPGSKAALVYGQMNEPPGARARVALSGLTVAEYFRDQEG 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+
Sbjct: 244 QDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITS 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     D 
Sbjct: 302 VQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGDE 361

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 362 HYRVAREVQEILQTYKSLQDIIAILGMDELSEED-KLVVARARRIQRFLSQP 412


>gi|163761385|ref|ZP_02168459.1| ATP synthase subunit B [Hoeflea phototrophica DFL-43]
 gi|162281380|gb|EDQ31677.1| ATP synthase subunit B [Hoeflea phototrophica DFL-43]
          Length = 517

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/411 (25%), Positives = 189/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V+       +   +  Q   +  + +V   +  + V    +   E + 
Sbjct: 50  GRISQVIGAVVDVSFDGPLPRILSALETQNMGNRLVLEVAQHLGENTVRTIAMDSTEGLV 109

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    + K   + EI    P  + +   
Sbjct: 110 RGQEVVDTGAAISVPVGDETLGRIMNVIGEPVDDAGPI-KTKATREIHQDAPSYVEQSTE 168

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 169 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVARAHGGYSVFAGVGER 228

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G +  K+ +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 229 TREGNDLYHEMIESGVNKHGGGDGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQ 288

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +   KG+IT+V
Sbjct: 289 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSV 346

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+R+++E+G YP VDPL S SR+ D      + 
Sbjct: 347 QAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRMLDPQIVGEEH 406

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +   + R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 407 YEVARKVQSTLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQP 456


>gi|159185297|ref|NP_355558.2| F0F1 ATP synthase subunit beta [Agrobacterium tumefaciens str. C58]
 gi|81848584|sp|Q8UC76|ATPB_AGRT5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|159140555|gb|AAK88343.2| ATP synthase beta chain [Agrobacterium tumefaciens str. C58]
          Length = 484

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/427 (25%), Positives = 191/427 (44%), Gaps = 18/427 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRIN 66
           +A+ A       V   G ++ +      V    +   + + +  Q   +  + +V   + 
Sbjct: 1   MAKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLG 60

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            ++V    +   E +  G  V   G    +       GR++N +G+P+D    +      
Sbjct: 61  ENVVRTIAMDSTEGLVRGQSVADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKR 120

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 121 A-IHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNV 179

Query: 186 CFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   + +        G    K+ +V    +E P  R   
Sbjct: 180 AKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEGSKAALVYGQMNEPPGARARV 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            LT +TIAE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ 
Sbjct: 240 ALTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQ 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL
Sbjct: 300 ERI--TTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPL 357

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D      +  ++   +   + R++  +DI  I G     +      V +   I
Sbjct: 358 DSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQDIIAILGMDELSEED-KLTVARARKI 416

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 417 ERFLSQP 423


>gi|54295822|ref|YP_128237.1| F0F1 ATP synthase subunit alpha [Legionella pneumophila str. Lens]
 gi|81601134|sp|Q5WSG6|ATPA_LEGPL RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|53755654|emb|CAH17156.1| hypothetical protein lpl2912 [Legionella pneumophila str. Lens]
          Length = 517

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 102/445 (22%), Positives = 179/445 (40%), Gaps = 30/445 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L         V       G I S+      +  L+  V  G+ +   G     
Sbjct: 8   NPSEISELIRKKIDQFSVVSEARNEGTIVSLKDGIVRLHGLAD-VMAGEMIEFPGG---V 63

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG  
Sbjct: 64  YGLALNLERDSVGAVILGDSSTLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKG 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    +S  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK+ +
Sbjct: 124 PIESSGMS-PIEKVAPGVITRKSVDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAI 182

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   VG++   V   +         + ++VVVA + +S  L+ +A
Sbjct: 183 AIDAIINQKGTGVKCVYVAVGQKASSVASIVRKLEEHGALEHTIVVVAGASDSAALQYIA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  +F    RLL
Sbjct: 243 PYSGCTMGEYFMERGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLL 302

Query: 295 ERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER                   + G++TA+  +     + +  +  +V SI DG I L+  
Sbjct: 303 ERAARINADEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVD 362

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A +   KKL       + +F E         +   +D 
Sbjct: 363 LFNSGVRPAINSGLSVSRVGGAAQTKIMKKLGGGTRLALAQFRELE---AFSQFASDLDD 419

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
              K + +   I + +KQ      +
Sbjct: 420 ATRKQLERGQRITELMKQKQYSPLT 444


>gi|115353163|ref|YP_775002.1| flagellar protein export ATPase FliI [Burkholderia ambifaria AMMD]
 gi|115283151|gb|ABI88668.1| flagellar protein export ATPase FliI [Burkholderia ambifaria AMMD]
          Length = 513

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 153/436 (35%), Positives = 230/436 (52%), Gaps = 19/436 (4%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQV 62
           L  LA    + L +   G ++    +      L   + +G     +      L     +V
Sbjct: 65  LNGLATRSQRALPLRPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPPGSTLPHAEAEV 122

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFH----------WGRFRISPSACWCGRVINALGKP 112
           +  + D +++ P      +  G  V+            G  R+       GRV++A G+P
Sbjct: 123 VGFSGDRLFLMPTTDVAGVLPGARVWPRESAPVADPLAGAKRLPVGWEMLGRVVDASGRP 182

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG   L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+
Sbjct: 183 LDGLGPL-ASKVDASLSAPSINPLDREPIHSVLDVGVRAINALLTVGRGQRMGLFAGSGV 241

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILR 231
           GKS LL   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR
Sbjct: 242 GKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLR 301

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 302 MQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 361

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP +
Sbjct: 362 ALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAI 421

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR             V     ++ R++  RD+  +G Y PG D  LD+A+   P
Sbjct: 422 DIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYP 481

Query: 412 IIYDFLKQSPSDLSSE 427
            I  FL+Q   + +  
Sbjct: 482 RIESFLQQGFRECAPF 497


>gi|187735015|ref|YP_001877127.1| ATP synthase F1, alpha subunit [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425067|gb|ACD04346.1| ATP synthase F1, alpha subunit [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 510

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 104/446 (23%), Positives = 180/446 (40%), Gaps = 28/446 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   L+ L    +  + ++  +  G I S+      +  LS  V L + +   G     +
Sbjct: 1   MSNILQELEAEIKKATASVSQENVGVIRSVGDGVAKIEGLS-GVMLNEMIEFPGG---VM 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +    V    +G   ++  GDLV   GR   +       GRV+N LG+PIDG   
Sbjct: 57  GLAMNLEEHEVGAVILGDDSKLKEGDLVKCSGRLLSVPVGRSLLGRVVNTLGEPIDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + + +    +       ++RQ V    +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 117 I-EAEAYYPVEKIASGIISRQSVSVPVQTGILPIDAMIPIGRGQRELIIGDRATGKTAIA 175

Query: 179 SMFARSDCFD---------------KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVA 222
                +                     I   +G++   +   +         K S+VV A
Sbjct: 176 MDTMIAQAEQNRLAEEGKLPDHQPLYNIYVAIGQKRANISRLVAKLEETGAMKYSIVVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           ++ +   +  +AP     + EYF  KG++ L++ D +++ A + R+I+           Y
Sbjct: 236 SASDPAAMLYLAPYAGCAMGEYFMDKGEDALIVYDDLSKHAVAYRQISLILRRPSGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     KE   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERAARINKEHGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P ++   SVSR+   A +   KKL  S+   + +F E +       +   +D
Sbjct: 356 DLFYQGVRPAINVGISVSRVGSSAQTKIIKKLAGSIKLDLAQFTELQ---AFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
                 + +   I +  KQ+  +  S
Sbjct: 413 PSTKAKLARGQRIVELFKQNQYEPKS 438


>gi|34539379|gb|AAQ74573.1| F1-ATPase alpha subunit [Narthecium ossifragum]
          Length = 417

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 94/409 (22%), Positives = 169/409 (41%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + + ++ V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGXNE-IQAGEMVEFA---SGVKGIALXLEIEXVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVXVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEXMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             SL   + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 CGSLKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|12659369|gb|AAG60219.1| ATPase alpha subunit [Drimys winteri]
          Length = 413

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/410 (22%), Positives = 166/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 402


>gi|156530203|gb|ABU75198.1| AtpB [Simaba guianensis]
 gi|156530205|gb|ABU75199.1| AtpB [Simaba polyphylla]
          Length = 494

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|156530187|gb|ABU75190.1| AtpB [Simaba guianensis]
 gi|156530199|gb|ABU75196.1| AtpB [Simaba orinocensis]
 gi|156530201|gb|ABU75197.1| AtpB [Simaba orinocensis]
          Length = 496

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|269114798|ref|YP_003302561.1| ATP synthase subunit alpha [Mycoplasma hominis]
 gi|268322423|emb|CAX37158.1| ATP synthase alpha chain [Mycoplasma hominis ATCC 23114]
          Length = 527

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 109/445 (24%), Positives = 192/445 (43%), Gaps = 21/445 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      L+ + +   K+        + G + ++      V+ LS  V  G+ V  +   
Sbjct: 1   MSLEPNDLSAIIKAQIKHFNEDISKQEIGRVITVGDGIALVSGLS-NVEYGELVKFE--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           S  +G  + +  D+V I  +G    I     V+   +           GRV++AL  PID
Sbjct: 57  SGVIGMALNLEEDLVGIVVMGDDRNIVENSTVYRTKQVISTPVGNHLSGRVLDALANPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + + +  I    P  M R+ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-QYEYTRPIFKIAPGVMTRKEVNQPLETGILAIDAMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +        I   VG++   + + ++     D LK + ++ A++ +S  L+
Sbjct: 176 TAIAIDAILNQKGRNVYCIYVAVGQKNSTIAQIVDQLAKHDALKYTTIISASASDSAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T +TIAE + ++G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYTGITIAEEWMARGKDVLIIYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYIHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER      +   G+ITA+  +    ++    I  +V SI DG I    +L   G+ P
Sbjct: 296 QLLERAARVNSDYGGGSITALPIIETQAEDIAAYIPTNVISITDGQIFTKEALFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A +   KK+VSSL   + ++ E   +     +   +D      +  
Sbjct: 356 AIDIGYSVSRVGSAAQTKLTKKVVSSLKLELAQYNE---MLAFAQFGSDLDQATRTVLDH 412

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEIT 434
              +Y+ LKQ     S     ++I 
Sbjct: 413 GAKVYELLKQPQ--YSPYSSIEQII 435


>gi|229490031|ref|ZP_04383884.1| ATP synthase F1, alpha subunit [Rhodococcus erythropolis SK121]
 gi|229323132|gb|EEN88900.1| ATP synthase F1, alpha subunit [Rhodococcus erythropolis SK121]
          Length = 547

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/448 (22%), Positives = 181/448 (40%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    ++Y+ +   +      G ++  +     V+ L       + +   G     +G
Sbjct: 9   DEIRSAIDNYTASYSPEASREEVGTVTDTSDGIAHVSGL-PSAMSNELLEFPGG---IVG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G  + I  G  V   G    +     + GRVI+ LG PIDG   +
Sbjct: 65  VALNLDATEIGAVILGDYQNIQEGQEVKRTGDVLSVPVGDAFLGRVIDPLGAPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              + +  +  +    + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 ESTE-NRALELQAASVLERQPVEEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
             +L+  A  D  D       I   +G++G  +               + +V A + +S 
Sbjct: 184 DAILNQKANWDSGDVNKQVRCIYVAIGQKGSTIAGVKAALEEKGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIGQHWMYQGKHVLVVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER          G++TA+  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERSAKLSDALGGGSLTALPIIETKANDVSAYIPTNVISITDGQVFLESDLFNKG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +    K+  SL   + +F E         +   +D      
Sbjct: 364 VRPAINVGISVSRVGGAAQTKGMTKVSGSLRLELAQFRELE---AFSAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           + +   + + LKQ   S +  ED    I
Sbjct: 421 LERGARLVELLKQDQYSPIPVEDQIVSI 448


>gi|153005077|ref|YP_001379402.1| FliI/YscN family ATPase [Anaeromyxobacter sp. Fw109-5]
 gi|152028650|gb|ABS26418.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. Fw109-5]
          Length = 434

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 151/417 (36%), Positives = 224/417 (53%), Gaps = 8/417 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEIS 82
           G ++ +  +       +  V  G+ V       +  L +V+    +   + P+G    + 
Sbjct: 21  GRVTRLVGLVIEAE--AAGVRQGEAVEILTPGREPLLAEVVGFRDERAVLLPLGDPAGLG 78

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
               +   GR   I       GRV++ LG+P+DG   L        +    P  + R+R+
Sbjct: 79  ADSEIVSTGRPLSIRAGDGLLGRVLDGLGRPLDGL-PLPASLEEWAVDRPAPGPLARRRI 137

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
                 G+R ID    +  GQRIG+FAG+G+GKSTLL   AR    +  +I LVGERGRE
Sbjct: 138 TAPLALGVRAIDGLLTVGEGQRIGIFAGAGVGKSTLLGQIARHTRAELSVICLVGERGRE 197

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E+ LG + L +SVVV ATSD   + R  A   A  IAE+F+ +   VL +LDS+T
Sbjct: 198 VREFVEEALGPEGLARSVVVAATSDAPALERLKAAHVATGIAEWFAERDRRVLFMLDSLT 257

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + RE+   +GE P   GYP SVF+ LPRLLER G   + +G ITA+ +VLV G + 
Sbjct: 258 RYARAQREVGLAAGEPPARHGYPPSVFAALPRLLERTGN--RARGGITALYTVLVAGGDL 315

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           ++PIAD VR ILDGH+VL+  +A  GRYP +D L S+SR+     +   +     L  L+
Sbjct: 316 DEPIADEVRGILDGHVVLDPRVAAAGRYPAIDVLRSLSRVMPAVTTDSHRAAADRLRALL 375

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              E  RD+  +G Y  G D   D+A+ ++P I  FL+Q   +  + +  +   ++L
Sbjct: 376 AAHERHRDLIAVGAYARGSDPDADEALARLPAIEAFLRQRADEAEAPERTRARLEEL 432


>gi|91215463|ref|ZP_01252434.1| F0F1 ATP synthase subunit alpha [Psychroflexus torquis ATCC 700755]
 gi|91186415|gb|EAS72787.1| F0F1 ATP synthase subunit alpha [Psychroflexus torquis ATCC 700755]
          Length = 526

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/450 (23%), Positives = 174/450 (38%), Gaps = 37/450 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            Q++   S++ + + G +  +      V  L+    LG+ V  +G  +   G V+ +  D
Sbjct: 15  KQISGFESESSLDEVGTVLRVGDGIANVYGLT-NAQLGELVEFEGGLN---GMVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    I+ GD V    +   I       GRV+N LG+ IDG   +      M 
Sbjct: 71  TVGVVLLGKSNTINEGDSVKRTKKTSSIQVGEGIVGRVVNTLGQTIDGKGEIEGETFLMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK+++      +   
Sbjct: 131 IERKAPGVIYREPVTEPMQTGIKSIDAMVPVGRGQRELVIGDRQTGKTSVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V               + +V A + +   ++  APL   
Sbjct: 191 FYDKGEPVYCIYVAIGQKASTVAGIANLLEEKGALAYTTIVAANASDPAAMQVYAPLAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 IINDDDIAKQMNDLPEALKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLT 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P +D   SVSR+   A     KK+  +L     ++ E         +   +
Sbjct: 371 SDLFNSGVRPAIDVGISVSRVGGSAQIKSMKKVAGTLKLDQAQYRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQS-PSDLSSED 428
           D      + +     + LKQS  S  + ED
Sbjct: 428 DASTQNTIEKGKRNVEILKQSEASPFAVED 457


>gi|229825574|ref|ZP_04451643.1| hypothetical protein GCWU000182_00936 [Abiotrophia defectiva ATCC
           49176]
 gi|229790137|gb|EEP26251.1| hypothetical protein GCWU000182_00936 [Abiotrophia defectiva ATCC
           49176]
          Length = 609

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 180/426 (42%), Gaps = 15/426 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +  L  L    E ++     Q  G+++++      +  +  +   G+ +  +       G
Sbjct: 108 KDRLSKLRSSIEGFAPKTEEQEVGFVTAVGDGIARIQGI-DHAMYGEIIEFESGAK---G 163

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
            V  I  D +        + ++ G  V   G+   +     + GRV++ALG PIDG   +
Sbjct: 164 MVQDIKSDSIGCILFNKADTVAEGARVNRTGKKTGVPVGEGFLGRVVDALGNPIDGGGDV 223

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    +  + P  + R+ V    +TGI  ID   P+  GQR  +      GK+ +  
Sbjct: 224 VASDFR-PVEHEAPGIVERKSVSVPLETGILAIDSMFPIGRGQRELIIGDRQTGKTAIAV 282

Query: 180 MFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +        I   +G++   V + +     +     S+VV AT+ +S  L+ +AP 
Sbjct: 283 DTIINQKGKGVICIYVAIGQKSSTVAKLVNTLDKNGALSYSIVVAATASDSSALQYIAPY 342

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A ++AEYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER
Sbjct: 343 AATSMAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLER 402

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  I  +V SI DG I L  SL   G+ P V+  
Sbjct: 403 SSRLSDEAGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESSLFFSGQRPAVNVG 462

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A S   KK   S+   + ++ E     +   +   +D +    +     + 
Sbjct: 463 LSVSRVGGAAQSKAMKKASGSIRIDLAQYREME---VFTQFSSDLDQVTKNQLTYGKGLM 519

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 520 ELLKQP 525


>gi|12659361|gb|AAG60215.1| ATPase alpha subunit [Hedyosmum sp. CCWD-2000]
          Length = 408

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 167/408 (40%), Gaps = 24/408 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------------DCFDKVIISLVG 196
           ++ +D   P+  GQR  +      GK+ +      +            D +   +   +G
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDKYIYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 400


>gi|156530215|gb|ABU75204.1| AtpB [Simarouba versicolor]
          Length = 496

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|300781410|ref|ZP_07091264.1| ATP synthase F1 sector alpha subunit [Corynebacterium genitalium
           ATCC 33030]
 gi|300533117|gb|EFK54178.1| ATP synthase F1 sector alpha subunit [Corynebacterium genitalium
           ATCC 33030]
          Length = 548

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 183/442 (41%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+ +   +      G ++S       V+ L       + +         +G
Sbjct: 9   DEIRSAIANYTSSYSAEASREEVGVVTSAADGIAQVSGL-PSCMTNELLEFSNG---VIG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
               ++ D V +  +G  E I  GD V   G    I     + GRVIN LG+PIDG   +
Sbjct: 65  VAQNLDTDTVGVVVLGDFETIYEGDKVSRTGEVLSIPVGEAFLGRVINPLGQPIDGLGPI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            + D    +  +    ++RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 -EADEERVLELQAAGVLDRQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+L+  A  +  DK      I   +G++G  +             + + +V A + +S 
Sbjct: 184 DTILNQKAYWESGDKTKQVRCIYVAIGQKGSTIAGVRRTLEEHGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP     + +++  +G++VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFAGAALGQHWMYQGNHVLVVYDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++TA+  +    ++    I  +V SI DG   L   L  +G
Sbjct: 304 LHSRLLERAAKLNDELGAGSLTALPIIETKANDVGAFIPTNVISITDGQCFLQSDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P +D   SVSR+   A +   KK+  +L   +  + +         +   +D    + 
Sbjct: 364 VRPAIDVGISVSRVGGAAQTKGMKKVAGNLRLDLAAYRDLESFAA---FASDLDDASKRQ 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ  +     +
Sbjct: 421 LERGQRLVELLKQPENSPQPVE 442


>gi|13475302|ref|NP_106866.1| ATP synthase in type III secretion system, hrcN [Mesorhizobium loti
           MAFF303099]
 gi|14026053|dbj|BAB52652.1| ATP synthase in type III secretion system; HrcN [Mesorhizobium loti
           MAFF303099]
          Length = 452

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 159/439 (36%), Positives = 234/439 (53%), Gaps = 14/439 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLG 60
             + +L   A+     +V   G I+        V  +     +G+  + Q          
Sbjct: 19  PAISSLRATAKGIDTRVVR--GRITRAVGTL--VHAVLPDTRIGELCLLQDPRTGLSLEA 74

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +VI +  D V + P+G    +S    V   GR R +       GRVI++  +P+DG   +
Sbjct: 75  EVIGLLDDGVLLTPIGDLVGLSSRAEVVATGRMREVPVGNDLLGRVIDSRCRPLDGKGQI 134

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +  +  + P  M R+ +E+    G+RV+D       GQRIG++   G GKSTLLS
Sbjct: 135 ETTE-TRPLHGRAPNPMTRRMIERPLPLGVRVLDGLLTCGEGQRIGIYGEPGGGKSTLLS 193

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
              +    D VI++L+GERGREVREFI      + L+++VVVV TSD S + R      A
Sbjct: 194 QIVKGAAADVVIVALIGERGREVREFIERHLGEEGLRRAVVVVETSDRSAVQRAQCAPMA 253

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             +AEYF  +G  V L+LDS+TRF  ++REI   +GE P  RG+P SVFS LP LLER G
Sbjct: 254 TALAEYFREQGLRVALMLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFSMLPGLLERAG 313

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            SE  +G+ITA  +VLV+GD   DPIA+  R ILDGH+VL+R++A    +P +D L S S
Sbjct: 314 MSE--RGSITAFYTVLVEGDGTGDPIAEESRGILDGHVVLSRAIAARSHFPAIDVLQSRS 371

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ D   S   +K  S    L+ R  ET  +  +G Y+ G D + D+AV  +  + +FL+
Sbjct: 372 RVMDAVVSRTHRKAASFFRELLSRHAETEFLINVGEYKQGGDPLTDRAVESIDELREFLR 431

Query: 419 QSPSDLSSEDVFQEITKKL 437
           QS  ++S    F+E    +
Sbjct: 432 QSEDEISG---FEETVAWM 447


>gi|164685644|gb|ABY66768.1| atp1 [Smilax sp. CWD 97.531]
          Length = 413

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 161/407 (39%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|171191275|gb|ACB45105.1| AtpB [Simaba cuneata]
          Length = 495

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|91795097|ref|YP_564748.1| F0F1 ATP synthase subunit beta [Shewanella denitrificans OS217]
 gi|123165633|sp|Q12HQ1|ATPB_SHEDO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91717099|gb|ABE57025.1| ATP synthase F1, beta subunit [Shewanella denitrificans OS217]
          Length = 463

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ +   G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQIYDALKITGEGA-CKGLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID    +G+ +    I    P 
Sbjct: 60  GSSDGLRRGLEVVNTGSPISVPVGVATLGRIMNVLGEPIDECGEIGEEE-RYVIHRSAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D     AV +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDED-KTAVARARKIERFLSQP 406


>gi|289623678|ref|ZP_06456632.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647648|ref|ZP_06478991.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330871282|gb|EGH05991.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 449

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 156/445 (35%), Positives = 235/445 (52%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
             L+Q  + ++  L     V   G +S++  +     C      +GD   V +   S  L
Sbjct: 3   AALSQWKDAHTARLRDYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLL 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGD 116
            +++    +   +  +G  + I +G  +   G   RI       G V++  G+P+  D  
Sbjct: 61  AEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCL 120

Query: 117 DSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    D       +++   P   R R+     TG+R ID    L  GQR+G+FAG+G G
Sbjct: 121 GAFAGSDDRRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCG 180

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           K+TL++  AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R 
Sbjct: 181 KTTLMAELARNMGCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERA 240

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPR
Sbjct: 241 RAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPR 300

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G SE   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D
Sbjct: 301 LVERAGMSEN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+       + ++  + L  L+  +++   +  +G Y+ G D + D AV     
Sbjct: 359 VSASISRILSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDD 418

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I +FL+Q   DL      QE    L
Sbjct: 419 INEFLRQ---DLREPVPLQETLDGL 440


>gi|282853800|ref|ZP_06263137.1| ATP synthase F1, alpha subunit [Propionibacterium acnes J139]
 gi|282583253|gb|EFB88633.1| ATP synthase F1, alpha subunit [Propionibacterium acnes J139]
 gi|314966537|gb|EFT10636.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL082PA2]
 gi|314981462|gb|EFT25556.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL110PA3]
 gi|315092126|gb|EFT64102.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL110PA4]
 gi|315092943|gb|EFT64919.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL060PA1]
 gi|327327361|gb|EGE69137.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL103PA1]
          Length = 545

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKDV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|332526948|ref|ZP_08403037.1| flagellar protein export ATPase FliI [Rubrivivax benzoatilyticus
           JA2]
 gi|332111387|gb|EGJ11370.1| flagellar protein export ATPase FliI [Rubrivivax benzoatilyticus
           JA2]
          Length = 469

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 154/452 (34%), Positives = 231/452 (51%), Gaps = 28/452 (6%)

Query: 6   ETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQV 62
               Q  +DY+     +   G +  +T +      +   V +G     +       L +V
Sbjct: 13  SRFLQDIQDYASAPQPLEAVGTLLRVTGLVLEAAGV--RVPVGSICEIRQPGQPPVLAEV 70

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR---------------------FRISPSACW 101
           +  N D  ++ P G    ++ G  V                            +      
Sbjct: 71  VGFNGDRAFLMPTGDLHGLASGARVIPRPAPRVPPRFGVENHPWRRSEDRGLHLPMGDGL 130

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+++ G P+D    +        ++ +   AM+R  V +   TG+R I+    +  G
Sbjct: 131 LGRVVDSHGHPMDRGGPIADAHAQ-PMIRRPINAMDRDPVRRALDTGVRSINALLTVGRG 189

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220
           QR+G+FAG+G+GKS LL M AR    D +++ L+GERGREV+EFIED LG D L++SVVV
Sbjct: 190 QRLGLFAGTGVGKSVLLGMMARYTAADVIVVGLIGERGREVKEFIEDILGEDGLRRSVVV 249

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            A +D  P++R      A  IAE+F  +G +VLL++DS+TR+A + REIA   GE P  +
Sbjct: 250 AAPADAPPLVRMQGASYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAIGEPPATK 309

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GYP SVF++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ R ILDGHIVL+R
Sbjct: 310 GYPPSVFAKLPQLVERSGNGLNGVGSITAFYTVLTEGDDPQDPIADAARGILDGHIVLSR 369

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            LAE G YP +D   SVSR+       +       L  L+ ++ + RD+  +G Y PG D
Sbjct: 370 ELAESGHYPAIDVERSVSRVMSSVAPKEHLLAARKLRQLLAKYNKARDLIQLGAYAPGHD 429

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             LD AV     I   L+Q   + +  +  ++
Sbjct: 430 AELDTAVRLHGQIVALLQQDMRERADLESSRQ 461


>gi|6561647|gb|AAF16991.1|AF197659_1 ATPase alpha subunit [Berberis bealei]
          Length = 412

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/404 (22%), Positives = 164/404 (40%), Gaps = 23/404 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I     L   G  P ++  +SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 LELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 396


>gi|325293991|ref|YP_004279855.1| F0F1 ATP synthase subunit beta [Agrobacterium sp. H13-3]
 gi|325061844|gb|ADY65535.1| F0F1 ATP synthase subunit beta [Agrobacterium sp. H13-3]
          Length = 484

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 107/427 (25%), Positives = 191/427 (44%), Gaps = 18/427 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRIN 66
           +A+ A       V   G ++ +      V    +   + + +      +  + +V   + 
Sbjct: 1   MAKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETDNNGNRLVLEVAQHLG 60

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            ++V    +   E +  G +V   G    +       GR++N +G+P+D    +      
Sbjct: 61  ENVVRTIAMDSTEGLVRGQVVADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKR 120

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 121 A-IHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNV 179

Query: 186 CFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   + +        G    K+ +V    +E P  R   
Sbjct: 180 AKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKLGGGEGSKAALVYGQMNEPPGARARV 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            LT +TIAE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ 
Sbjct: 240 ALTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQ 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL
Sbjct: 300 ERI--TTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPL 357

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D      +  ++   +   + R++  +DI  I G     +      V +   I
Sbjct: 358 DSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQDIIAILGMDELSEED-KLTVARARKI 416

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 417 ERFLSQP 423


>gi|6561628|gb|AAF16972.1|AF197640_1 ATPase alpha subunit [Brasenia schreberi]
          Length = 402

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 90/405 (22%), Positives = 167/405 (41%), Gaps = 23/405 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V          G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFACG---VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGSSKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           + ++ E   +  +  +   +D      +++   + +  KQ   + 
Sbjct: 356 LAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 397


>gi|87311752|ref|ZP_01093867.1| ATP synthase subunit A [Blastopirellula marina DSM 3645]
 gi|87285536|gb|EAQ77455.1| ATP synthase subunit A [Blastopirellula marina DSM 3645]
          Length = 508

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 101/435 (23%), Positives = 177/435 (40%), Gaps = 19/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N + +A + +   +       V + G +  +      V  LS  +  G+ V   G  
Sbjct: 1   MKFNADEIASIIQQEIQQYESQIDVREVGTVLEVGDGIARVYGLS-GIMAGEMVEFPGGV 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           +   G    +  + V +  +G    I  GD V   G+   +       GRV++ LG P+D
Sbjct: 60  N---GLAFNLEENSVGVIILGDFLSIKEGDEVKALGKLLSVPVGEAVLGRVVDPLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +   S  +    P    R+ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 117 GMGPI-QTPHSRPVEYLAPGVSERKPVTEPMQTGIKAIDAMTPIGRGQRELIIGDRKTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  + +   K     +G++   V   +E          + V+VA +     L+
Sbjct: 176 TAIALDAILNQKETGVKCFYVAIGQKDSSVAAVVEILRQHGAMDYTTVIVAGASAPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   +AEYF   G++ L++ D +++ A + RE++      P    YP  VF    
Sbjct: 236 YVAPYSGTAMAEYFMFNGEHALIVYDDLSKQAVAYRELSLLMRRPPGREAYPGDVFYCHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER          G++T++  +       +  I  +V SI DG I L   L   G+ P
Sbjct: 296 RLLERSSKLSDALGAGSLTSLPIIETLEGEVSAYIPTNVISITDGQIYLQPDLFFAGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     KK+   L   +  F E      +G     +D      + +
Sbjct: 356 AMNAGISVSRVGGNAQIKAMKKVAGGLRLDLASFRELEAFAQLGTE---LDPATQARLDR 412

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 413 GYRMVELLKQGQYQP 427


>gi|329901248|ref|ZP_08272773.1| Flagellum-specific ATP synthase FliI [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549180|gb|EGF33772.1| Flagellum-specific ATP synthase FliI [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 466

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 153/458 (33%), Positives = 231/458 (50%), Gaps = 34/458 (7%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQ 61
           ++   L Q+ E          G ++ +  +      L   + +G        N   +  +
Sbjct: 14  RDCSELLQIVEPMQ-----VSGRVTRVAGLVMEAIGL--RLAVGSACTVPLPNGSRIEAE 66

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR---------------------ISPSAC 100
           V+  + D +++ P    E +  G  VF                           +     
Sbjct: 67  VVGFDNDRLFLMPQSDVEGVIPGTRVFPVEAVHSLPRAGSVNHPRRRPSDRGRHLPVGDE 126

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GRV++  G+P+D    L     +  +  +    + R  +      G+R I+    +  
Sbjct: 127 LLGRVLDGAGRPLDTLGPLNASSAA-PLNVRAANPLTRAPIIDVLDVGVRAINSMLTVGR 185

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219
           GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVV
Sbjct: 186 GQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARSVV 245

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A +D  P++R         IAE+F  +G +VL+I+DS+TR+A + REIA   GE P  
Sbjct: 246 VAAPADTPPLMRLQGAAYTTAIAEHFRDQGKHVLMIMDSLTRYAMAQREIALAIGEPPAT 305

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVLN
Sbjct: 306 KGYPPSVFAKLPALVERAGNGREGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLN 365

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           R LAE G YP +D   S+SR      + + +KL   L  L  R++  RD+  +G Y  G 
Sbjct: 366 RQLAEAGHYPAIDIEQSISRAMHSITTPEHQKLTRRLKQLYSRYQRNRDLISVGAYSAGS 425

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           D +LD+A+     I DFL+Q   +   +    E   +L
Sbjct: 426 DPVLDEAILLNTRIEDFLQQGIHE---QATISESMDQL 460


>gi|189017750|gb|ACD71544.1| F1-ATPase alpha subunit [Geomitra clavigera]
          Length = 398

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 90/395 (22%), Positives = 162/395 (41%), Gaps = 20/395 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           +  G+ V      S   G  + +  + V +   G    I  GDLV   G     P     
Sbjct: 5   IKAGEMVEFA---SGVKGIALNLENENVGLVVFGSDTAIKEGDLVKRTGSIVDVPAGKSM 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  G
Sbjct: 62  LGRVVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---------VIISLVGERGREVREFIEDYLGD 212
           QR  +      GK+ +      +               +   +G++   V + ++     
Sbjct: 121 QRELLIGDRQTGKTAIAIETILNQKQIHSKVESETLYCVYVAIGQKRSTVAQLVKILEEA 180

Query: 213 NL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++ 
Sbjct: 181 NALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSL 240

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVR 329
                P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V 
Sbjct: 241 LLRRPPGREAFPGDVFYLHSRLLERATKRSDQTGAGSSTALPVIETQAGDSSAYIPTNVI 300

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   +
Sbjct: 301 PITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---V 357

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
                +   +D      +++   + +  KQ   + 
Sbjct: 358 AAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 392


>gi|330469846|ref|YP_004407589.1| F0F1 ATP synthase subunit alpha [Verrucosispora maris AB-18-032]
 gi|328812817|gb|AEB46989.1| F0F1 ATP synthase subunit alpha [Verrucosispora maris AB-18-032]
          Length = 548

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 99/445 (22%), Positives = 180/445 (40%), Gaps = 24/445 (5%)

Query: 7   TLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            L +    YS ++  +  G ++        V  L       + +  +      LG  + +
Sbjct: 14  ALERYVSSYSPDVSREEVGTVADTGDGIAHVEGL-PSTMTNELLEFEDG---TLGVALNL 69

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           ++  + +  +G    +  G  V   GR   +     + GRV+NALG+PIDG   +   + 
Sbjct: 70  DVREIGVVVLGDYSGLEEGQRVKRTGRVLSVPVGDAFLGRVVNALGQPIDGLGEIAD-EG 128

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLS 179
             E+  + P  M RQ V +  +TGI+ ID  TP+  GQR  +      GK      T+L+
Sbjct: 129 YRELELQAPNVMARQSVFEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTTVALDTILN 188

Query: 180 MFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
                   D     + I   +G++   +               + +V + + +    + +
Sbjct: 189 QRENWATGDPKKQVRCIYVAIGQKASTIASIKGQLEEAGAMEYTTIVASPASDPAGFKYL 248

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T  +I +++   G +VL++ D +++ A + R ++      P    YP  VF    RL
Sbjct: 249 APYTGSSIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRL 308

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++T +  +    ++ +  I  +V SI DG I L   L  +G  P +
Sbjct: 309 LERCAKLSDEMGGGSMTGLPIIETKANDISAFIPTNVISITDGQIFLETDLFNQGVRPAI 368

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  SL   + +F E         +   +D      + +  
Sbjct: 369 NVGTSVSRVGGAAQMKPMKKVSGSLRLNLAQFRELE---AFAAFASDLDKASRAQLDRGA 425

Query: 412 IIYDFLKQ-SPSDLSSEDVFQEITK 435
            + + LKQ + S    +D    +  
Sbjct: 426 RLVELLKQPNYSPYPVQDEVVSVWA 450


>gi|156530139|gb|ABU75166.1| AtpB [Hannoa undulata]
          Length = 496

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|156530131|gb|ABU75162.1| AtpB [Gymnostemon zaizou]
 gi|156530133|gb|ABU75163.1| AtpB [Hannoa chlorantha]
          Length = 494

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|153012228|ref|YP_001381743.1| ATP synthase CF1 beta subunit [Medicago truncatula]
          Length = 490

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ QG   D +GQ I +  ++        V    
Sbjct: 21  GRITQIIGPVLDVVFPPGKMPNIYNALIVQG--RDTVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G +V + G    +       GR+ N LG+PID    +  G  S  I    P
Sbjct: 79  MSATDGLKRGMVVINTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|295131948|ref|YP_003582624.1| F0F1 ATP synthase subunit alpha [Zunongwangia profunda SM-A87]
 gi|294979963|gb|ADF50428.1| F0F1 ATP synthase subunit alpha [Zunongwangia profunda SM-A87]
          Length = 526

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 108/449 (24%), Positives = 175/449 (38%), Gaps = 37/449 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL+   +K  + + G + ++      V  LS     G+ V     +S   G V+ +  D 
Sbjct: 16  QLSGFEAKASLDEVGTVLTVGDGIANVYGLS-NAQYGELVQF---DSGLEGMVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G  +E+  G  V    R   I+      GRV+N LG+PIDG  ++      M +
Sbjct: 72  VGVVLLGPSKEVKEGSTVKRTQRIASINVGEGIVGRVVNTLGEPIDGKGTIEGETFEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF- 187
             K P  + R+ V +  +TGI+ ID   P+  GQR  V      GK+T+      +    
Sbjct: 132 ERKAPGVVFREPVTEPMQTGIKSIDAMVPVGRGQRELVIGDRQTGKTTVCIDTILNQKEF 191

Query: 188 ------DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
                    I   VG++   V    +       L  + +V A + +   ++  AP     
Sbjct: 192 YDAGKPVYCIYVAVGQKASTVAGIAKVLEDKGALAYTTIVAANASDPAPMQVYAPFAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEYFRDTGRPALIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFFLHSRLLERAAKV 311

Query: 301 EKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
             +                     G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 INDDDIAKTMNDLPDSLKDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLTS 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +D
Sbjct: 372 DLFNSGVRPAINVGISVSRVGGSAQIKSMKKVAGTLKLDQAQFRELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSED 428
                 + +     + LKQ  +D    ED
Sbjct: 429 AATMSVIEKGKRNVEILKQGQNDPYPVED 457


>gi|254228795|ref|ZP_04922218.1| ATPase FliI/YscN family [Vibrio sp. Ex25]
 gi|262396486|ref|YP_003288339.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
 gi|151938742|gb|EDN57577.1| ATPase FliI/YscN family [Vibrio sp. Ex25]
 gi|262340080|gb|ACY53874.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25]
          Length = 448

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 154/438 (35%), Positives = 246/438 (56%), Gaps = 8/438 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L++ LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSEALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                I Y+ P+     +  G  V    G   +  SA W GRV+N LG+P+D    L  G
Sbjct: 70  GFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSAQWLGRVLNGLGEPLDDGAPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 D-RVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREFI  +   +  KK++++ A +DESP++R  A L    +
Sbjct: 189 KNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           +EYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 249 SEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NQHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     + ++   +   + + +++  +GGY+PG D  LD++V   P +  +L+Q+ 
Sbjct: 369 STCTQEAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAYLQQAA 428

Query: 422 SD-LSSEDVFQEITKKLQ 438
           ++ +       E+ +  Q
Sbjct: 429 NESVDYPTSLTELAQLFQ 446


>gi|320586098|gb|EFW98777.1| alpha-glucan branching enzyme [Grosmannia clavigera kw1407]
          Length = 1204

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 116/441 (26%), Positives = 189/441 (42%), Gaps = 21/441 (4%)

Query: 11   LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLD 68
            L   Y+ +  V  G I  +      V   ++ +  + + +  Q      + +V   +   
Sbjct: 722  LGSRYASSAGVGDGKIHQVIGAVVDVKFDTEKLPPILNALETQNNGQKLVLEVAQHLGEH 781

Query: 69   IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
             V    +   E +  G      G    I       GR++N  G PID    + K D+   
Sbjct: 782  TVRCISMDGTEGLVRGAKATDTGSPIMIPVGPATLGRIMNVTGDPIDERGPI-KTDMRRS 840

Query: 128  IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
            I ++ P    +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 841  IHAEAPAFTEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 900

Query: 188  DKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTA 238
                 S+   VGER RE  +   +         D   K  +V    +E P  R    LT 
Sbjct: 901  AHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTG 960

Query: 239  VTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI
Sbjct: 961  LTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGLMQERI 1020

Query: 298  GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S 
Sbjct: 1021 --TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSK 1078

Query: 358  SRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            SR+ D      D     + +  ++  ++  +DI  I G     +      V +   I  F
Sbjct: 1079 SRMLDPRIVGDDHYNTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRF 1137

Query: 417  LKQSPSDLSSEDVFQEITKKL 437
            L Q     +   VF  I  KL
Sbjct: 1138 LSQP---FTVAQVFTGIEGKL 1155


>gi|218283209|ref|ZP_03489279.1| hypothetical protein EUBIFOR_01867 [Eubacterium biforme DSM 3989]
 gi|218216027|gb|EEC89565.1| hypothetical protein EUBIFOR_01867 [Eubacterium biforme DSM 3989]
          Length = 580

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 108/430 (25%), Positives = 191/430 (44%), Gaps = 17/430 (3%)

Query: 1   MQKN---LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           M+K+   +  L +  E +   +   + GY+ +I     T++ L  +   G+ VV +    
Sbjct: 85  MKKDGTLMSILKEAIEQFEATSQENEVGYVETIGDGIATISGL-DHAMYGEVVVFENGTK 143

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G V+ I  + + +        I  G  V    +   +  S+ + GRV++ LG PIDG
Sbjct: 144 ---GMVLDITTENIGVILFDTEGTIGQGTKVSRTKKQAGMPVSSNFLGRVVDPLGNPIDG 200

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   ++   I    P  +NR+ V    +TGI  ID   P+  GQR  +      GK+
Sbjct: 201 LGPIEATEMR-PIEEPAPSIINRKPVTNPMETGILSIDSMFPIGRGQRELIIGDRQTGKT 259

Query: 176 TLLSMFARSDCFD--KVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRK 232
           ++      +        I   + ++   V   +      D +  +V+V +T+ +S  L+ 
Sbjct: 260 SIALDTILNQKGKDCICIYVSIAQKASTVANLVNTLKKNDAMDYTVIVNSTAADSASLQY 319

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +A ++AEYF  +G +VL++ D +++ A + R I+   G  P    YP  VF    R
Sbjct: 320 IAPYSATSLAEYFMHQGKDVLIVYDDLSKHAVAYRTISLLLGRSPGREAYPGDVFYLHSR 379

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           LLER        G+ITA+  +     + +  I  +V SI DG I L   L  EG+ P V+
Sbjct: 380 LLERSSRLNS-GGSITALPIIETQDGDVSAYIPTNVISITDGQIFLESDLFFEGQRPAVN 438

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A +   KK   SL   + ++ E ++      +   +D    + +    +
Sbjct: 439 VGLSVSRVGGAAQTKAMKKASGSLRINLAQYREMKEF---TQFASDLDDATKRQLQHGQV 495

Query: 413 IYDFLKQSPS 422
           + + LKQ  +
Sbjct: 496 LMELLKQPLN 505


>gi|156530191|gb|ABU75192.1| AtpB [Simaba glabra]
          Length = 494

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|168334547|ref|ZP_02692703.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 432

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 152/423 (35%), Positives = 233/423 (55%), Gaps = 9/423 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
            K+ V+  G +S +      +  +     +GD      K  + L  +V+      + + P
Sbjct: 12  EKSRVIYKGKVSKVVGS--AIESIGPMSNIGDICEIVPKTGNTLLAEVVGFREKNILLMP 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G    I  G  V   G +  I       G+V++    P+DG  +  +   S+ I    P
Sbjct: 70  LGNNSGIGPGCPVISNGQKITIKVDESLLGKVVDWRANPLDGTPN--RCKFSVPIEQDAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+R+      GI+ ID    +  GQR+G+FAGSG+GKSTL+ M AR+   D  +I+
Sbjct: 128 DPLKRKRIASQMVLGIKAIDGMLSIGSGQRMGIFAGSGVGKSTLMGMIARNAISDINVIA 187

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREF+ +D     L +S+VVVATSD+  ++R  A  TA  IAEYF  +G  V
Sbjct: 188 LIGERGREVREFLEKDLKEAGLARSIVVVATSDQPALIRLKAAKTATAIAEYFRDQGKQV 247

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L ++DS+TRF+ + REI  + GE PV+RGY  SVF  +P+LLER G +E   G IT + +
Sbjct: 248 LFLMDSLTRFSMAQREIGLSIGEPPVSRGYTPSVFGVMPKLLERTGNNE--IGGITGLYT 305

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VLVDGD+ N P+ D+ R ILDGHI+L+R +A    YP +D LAS+SR+     SA+ ++L
Sbjct: 306 VLVDGDDFNXPVTDTARGILDGHIMLSRKIAHRAHYPAIDVLASISRVMGDVISAEHREL 365

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            + +   +  + +  D+  +G Y  G +  +D A+ ++  I  FL Q   +    +   E
Sbjct: 366 ATIIKRHMAVYADVEDLINVGAYNRGSNPEIDAAIDKMGAINAFLTQKVDENIPLEQTLE 425

Query: 433 ITK 435
           I +
Sbjct: 426 IMR 428


>gi|225027466|ref|ZP_03716658.1| hypothetical protein EUBHAL_01722 [Eubacterium hallii DSM 3353]
 gi|224955201|gb|EEG36410.1| hypothetical protein EUBHAL_01722 [Eubacterium hallii DSM 3353]
          Length = 503

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 107/409 (26%), Positives = 174/409 (42%), Gaps = 14/409 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           N   + G +  +     TV  +  +   G+ VV         G V  I  + + +   G 
Sbjct: 27  NTSEETGTVIYVGDGIVTVYGI-DHAMYGEVVVFDNG---VKGMVQDIRQNEIGVILFGR 82

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              I  G  V    +   I     + GRVINALG+PIDG   + K D    I  + P  +
Sbjct: 83  DTGIKEGTKVVRTKKKAGIPVGNEYIGRVINALGEPIDGGAEI-KADGYRPIEEEAPGII 141

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISL 194
            R+ V+   +TGI  ID   P+  GQR  +      GK+++ +    +        I   
Sbjct: 142 ERKSVDTPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIATDTILNQKGKGVICIYVA 201

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V + +      D +  S+V+ +T+ E   L+ +AP     +AEYF  +G +VL
Sbjct: 202 IGQKASSVAKIVNTLEKYDAMDYSIVLSSTASEPASLQYIAPYAGTALAEYFMHQGKDVL 261

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVI 311
           ++ D +++ A + R I+      P    YP  VF    RLLER      +   G+ITA+ 
Sbjct: 262 IVYDDLSKHAVAYRAISLLLERSPGREAYPGDVFYLHSRLLERSSRLSDKLGGGSITALP 321

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V SI DG I L  +L  EG  P V+   SVSR+   A +   KK
Sbjct: 322 IIETQAGDVSAYIPTNVISITDGQIFLESNLFFEGMRPAVNVGLSVSRVGGAAQTKAMKK 381

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              S+   + ++ E     +   +   +D      +     I + LKQ 
Sbjct: 382 ACGSIRIDLAQYREME---VFTQFSSDLDDATKAQLAHGRAIMELLKQP 427


>gi|223667989|gb|ACN11590.1| F1-ATPase alpha subunit [Pseudovanilla ponapensis]
          Length = 425

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVREPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANAFSYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALMI 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|298485954|ref|ZP_07004029.1| type III secretion system cytoplasmic ATPase [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159540|gb|EFI00586.1| type III secretion system cytoplasmic ATPase [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 449

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 231/437 (52%), Gaps = 15/437 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINL 67
           A  A     + V   G +S++  +     C      +GD   V +   S  L +++    
Sbjct: 11  AHAARLRDYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDL 124
           +   +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D 
Sbjct: 69  ECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGSDD 128

Query: 125 SM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  
Sbjct: 129 RRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAEL 188

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R  A  TA  
Sbjct: 189 ARNMGCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATA 248

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G S
Sbjct: 249 IAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMS 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+
Sbjct: 309 EN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRI 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + ++  + L  L+  +++   +  +G Y+ G D + D AV     I +FL+Q 
Sbjct: 367 LSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ- 425

Query: 421 PSDLSSEDVFQEITKKL 437
             DL      QE    L
Sbjct: 426 --DLREPVPLQETLDGL 440


>gi|156530135|gb|ABU75164.1| AtpB [Hannoa klaineana]
 gi|156530147|gb|ABU75170.1| AtpB [Odyendyea gabonensis]
          Length = 498

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|120437590|ref|YP_863276.1| F0F1 ATP synthase subunit alpha [Gramella forsetii KT0803]
 gi|171460863|sp|A0M6G4|ATPA_GRAFK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|117579740|emb|CAL68209.1| ATP synthase subunit alpha [Gramella forsetii KT0803]
          Length = 526

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 171/448 (38%), Gaps = 36/448 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL+   SK  + + G + ++      V  L+     G+ V  +   S   G V+ +  D 
Sbjct: 16  QLSGFESKASLDEVGTVLTVGDGIANVYGLA-NAQYGELVQFE---SGLEGIVLNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V +  +G   EI     V    R   I+      GRV++ LG PIDG  ++      M +
Sbjct: 72  VGVVLLGPANEIKESSTVKRTQRIASINVGEGIVGRVVDTLGAPIDGKGAIEGETFEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF- 187
             K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +    
Sbjct: 132 ERKAPGVIYRQPVTEPLQTGIKSIDAMVPVGRGQRELVIGDRQTGKTTVCIDTILNQKEF 191

Query: 188 ------DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
                    I   +G++   V    +       L  + +V A + +   ++  AP     
Sbjct: 192 YDAGEPVYCIYVAIGQKASTVAAIAKTLEDKGALAYTTIVAANASDPAPMQVYAPFAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G   L++ D +++ A + RE++      P    YP  VF    RLLER    
Sbjct: 252 IGEYFRDTGRPALIVFDDLSKQAVAYREVSLLLRRPPGREAYPGDVFFLHSRLLERSAKV 311

Query: 301 EKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
             +                     G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 IDDDGIAKQMNDLPESLKDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLTS 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P +D   SVSR+   A     KK+  +L     ++ E         +   +D
Sbjct: 372 DLFNSGVRPAIDVGISVSRVGGNAQIKSMKKVAGTLKLDQAQYRELE---AFAKFGSDLD 428

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +     + LKQ  +D    +
Sbjct: 429 PTTMSVISKGKRNVEILKQGQNDPYPVE 456


>gi|146323|gb|AAA83873.1| H+ ATPase F1 alpha subunit [Escherichia coli]
          Length = 513

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCIGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A +    + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLARMPVALMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|189017682|gb|ACD71510.1| F1-ATPase alpha subunit [Burmannia hexaptera]
          Length = 392

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 120 LIIGDRQTGKTAIAIDTLLNQKQINSRGTKESETLYCVYVAIGQKRSTVAQLVQILSEAN 179

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 180 ALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 239

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 240 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 300 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 356

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 357 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 387


>gi|189017700|gb|ACD71519.1| F1-ATPase alpha subunit [Campylosiphon purpurascens]
          Length = 400

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/391 (23%), Positives = 161/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER       KG  + TA+  +     + +  I  +V S
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDRKGAGSSTALPVIETQAGDVSAYIPTNVIS 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|189017670|gb|ACD71504.1| F1-ATPase alpha subunit [Burmannia capitata]
          Length = 403

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 23/401 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 2   VYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 57

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 58  VPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDS 116

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVR 203
             P+  GQR  +      GK+ +      +                 +   +G++   V 
Sbjct: 117 LVPIGRGQRELIIGDRQTGKTAIAIDTLLNQKQMNSRGTSESETLYCVYVAIGQKRSTVA 176

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 177 QLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQ 236

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     + 
Sbjct: 237 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDV 296

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 297 SAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLEL 356

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 AQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 394


>gi|145297447|ref|YP_001140288.1| lateral flagellar FliI-like assembly ATPase protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850219|gb|ABO88540.1| lateral flagellar FliI-like assembly ATPase protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 446

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 236/424 (55%), Gaps = 12/424 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGE 79
            + G +  +T +   V  +   + +G          +  L +V+  N DI Y+ P+    
Sbjct: 23  RRYGRLVRVTGLTLEV--VGCQLVMGQRCRVDTATGAPLLAEVVGFNRDISYLMPLQPMS 80

Query: 80  EISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V    G   I       GRV++ L +P+DG      G+  + + +  P  + R
Sbjct: 81  GLYAGARVLPIDGEETIQVGEHLLGRVVDGLLQPLDGRPLRDDGE-RVALFAIPPNPLLR 139

Query: 139 QRVEKGFKTGIRVIDIF---TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             V +    GIR I+       +  GQR+G+FAGSG+GKS LL M  R+     V++ L+
Sbjct: 140 TPVREPLDVGIRAINGLNGLLTVGKGQRLGLFAGSGVGKSMLLGMMTRNTTAQIVVVGLI 199

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFI      + L ++VVV A +D+SP++R  A      IAEYF  +G +VLL
Sbjct: 200 GERGREVREFIEHSLGPEGLARAVVVAAPADQSPLMRLRAAQLCHRIAEYFREQGRDVLL 259

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REI    GE P  RGYP SVFS L +L+ER G    + G+++A  +VL
Sbjct: 260 LMDSLTRYAQAQREIVLAIGEPPATRGYPPSVFSMLTQLVERAGNGIHQDGSLSAFYTVL 319

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DP+ D+ R+ILDGHIVL R LAEEG YP +D  ASVSR+  +   A+ + L  
Sbjct: 320 AEGDDQQDPVVDAARAILDGHIVLTRRLAEEGHYPAIDIGASVSRVMPQVVPAEWQTLAV 379

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +L  L  R+++ R++  +GGY+PG D  +D+AV + P I  FL+Q   +   E  F ++ 
Sbjct: 380 TLRQLWGRYQQVRELLPLGGYQPGADPQMDEAVQRYPAIAAFLQQGIHE---ETPFVQVM 436

Query: 435 KKLQ 438
             L+
Sbjct: 437 TGLK 440


>gi|163840191|ref|YP_001624596.1| F0F1 ATP synthase subunit alpha [Renibacterium salmoninarum ATCC
           33209]
 gi|189081311|sp|A9WNC6|ATPA_RENSM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|162953667|gb|ABY23182.1| ATP synthase alpha chain [Renibacterium salmoninarum ATCC 33209]
          Length = 545

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 97/446 (21%), Positives = 180/446 (40%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G +++ +     V  L   V   + +  +      LG    
Sbjct: 14  ALNEFAASYEPGNAERVEVGRVTTASDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +++  + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + + +
Sbjct: 70  LDVREIGVIILGDFTGIEEGQEVHRTGEILSVPVGDQFLGRVVDPLGVPIDGLGEI-QAE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  + P    RQ V++  +TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 129 TTRALELQAPGVTQRQSVKEPMQTGLKAIDAMIPIGRGQRQLIIGDRKTGKTAIAVDTIL 188

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A     D       I   +G++   + E  +    +   + + +V + + +    + 
Sbjct: 189 NQQANWASGDVKKQVRCIYVAIGQKASTIAEVRQTLEDNGALEYTTIVASPASDPAGFKY 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 249 LAPYAGSAIGQHWMYSGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 308

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++    I  +V SI DG I L   L    + P 
Sbjct: 309 LLERCAKLSDELGAGSMTGLPIIETKANDVGAFIPTNVVSITDGQIFLQSDLFNANQRPA 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + + 
Sbjct: 369 VDVGISVSRVGGSAQVKSMKTVSGTLKLDLAQY---RDMQAFAMFASDLDAASRQQLTRG 425

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   +    ED    I  
Sbjct: 426 SRLMELLKQPQYTPYPVEDQVVSIWA 451


>gi|119367996|dbj|BAF40481.1| ATP synthase beta subunit [Cratoxylum cochinchinense]
          Length = 489

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           GYI+ I      +    + +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GYITQIIGPVLDIAFPPRKMPNIYNALVV---KGRDTIGQEINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    L     +  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPIDDLG-LVDTRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFAGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPKIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|166033114|ref|ZP_02235943.1| hypothetical protein DORFOR_02836 [Dorea formicigenerans ATCC
           27755]
 gi|166027471|gb|EDR46228.1| hypothetical protein DORFOR_02836 [Dorea formicigenerans ATCC
           27755]
          Length = 502

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 104/426 (24%), Positives = 181/426 (42%), Gaps = 20/426 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  +E   ++++D       + G + ++     T+  +  +   G+ V  +       G
Sbjct: 13  LKSEIENFDEISKD------SEVGTVVTVGDGIATIYGI-DHAMYGEIVTFENG---LKG 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
            V  I  D +     G    I  G  V    +   I     + GRVINALG PIDG   +
Sbjct: 63  MVQDIQKDEIGCILFGSDTGIKEGTKVARTKKKAGIPVGDKFIGRVINALGAPIDGAGEI 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
            + D    I ++ P  ++R+ V    +TGI  ID   P+  GQR  +      GK+    
Sbjct: 123 -EADDYRPIENEAPGIIDRKSVSVPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIAT 181

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV-VATSDESPILRKMAPL 236
            ++  ++      I   +G++   + + +  +         +V  +T+ +   L+ +AP 
Sbjct: 182 DTILNQNGNGVICIYVAIGQKASTISKVVNTFKTSGAMDHTIVLASTASDCAPLQYIAPY 241

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER
Sbjct: 242 AGTALAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLER 301

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +E   G+ITA+  +     + +  I  +V SI DG I L  SL   G  P V+  
Sbjct: 302 SSRLSEEKGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESSLFFSGMRPAVNVG 361

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK   SL   + ++ E     +   +   +D    + +     + 
Sbjct: 362 LSVSRVGGDAQTKAMKKAAGSLRIDLAQYREME---VFTQFSSDLDDATKEQLEYGSGLM 418

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 419 ELLKQP 424


>gi|34539323|gb|AAQ74545.1| F1-ATPase alpha subunit [Herreria montevidensis]
          Length = 407

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 163/403 (40%), Gaps = 23/403 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 395


>gi|27461555|gb|AAM95194.1| ATPase F1 alpha subunit [Baxteria australis]
          Length = 418

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHEXRR-VXVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  G R  +      GK  +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIXRGXRELIIGDXQXGKXAIAIDXILNQKQMNSRATSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|189017734|gb|ACD71536.1| F1-ATPase alpha subunit [Nietneria paniculata]
          Length = 401

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P  +   SVSR+   A     K+   SL   + ++ E   + 
Sbjct: 305 ITDGQICLETELFYRGIRPAFNVGLSVSRVGSAAQLRAMKQXCGSLKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 362 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 392


>gi|156530185|gb|ABU75189.1| AtpB [Simaba cuneata]
          Length = 497

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|167036419|ref|YP_001671650.1| F0F1 ATP synthase subunit alpha [Pseudomonas putida GB-1]
 gi|189081310|sp|B0KRB0|ATPA_PSEPG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166862907|gb|ABZ01315.1| ATP synthase F1, alpha subunit [Pseudomonas putida GB-1]
          Length = 514

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDNLDVSSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVILGAYDTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG       +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTQTDA-VEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++  + D     +   VG++   V   +     +     ++VVVA++ ES  L+ 
Sbjct: 178 AMAIDAIINQKDSGIFCVYVAVGQKRSTVANIVRKLEENGALANTIVVVASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|83719073|ref|YP_440755.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
 gi|257140596|ref|ZP_05588858.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
 gi|83652898|gb|ABC36961.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           E264]
          Length = 509

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 225/432 (52%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +     +L     +V+    + +++ P  
Sbjct: 75  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSSLPYAQAEVVGFAGERLFLMPTT 132

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 133 AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWELLGRVVDASGRPLDNLGPL-ASKVDA 191

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 192 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 251

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 252 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 311

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 312 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 371

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR      
Sbjct: 372 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASISRAMTALI 431

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                + V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 432 DDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 491

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 492 PYAPSLAALDAL 503


>gi|54297670|ref|YP_124039.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Paris]
 gi|53751455|emb|CAH12873.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Paris]
          Length = 449

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 159/429 (37%), Positives = 239/429 (55%), Gaps = 4/429 (0%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           Q  L  +     +   + ++  G IS    +       +Q V     V           +
Sbjct: 5   QTQLHKILSGTRNKHHSGLLHCGRISRAIGLTIEAKGFNQPVGARCLVKI-NDEHSVQAE 63

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG 120
           V+  + + VY+  +G  + I+ G  +   GR  ++S      GR++N  G  ID      
Sbjct: 64  VVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFIDDGPPSE 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             + +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL M
Sbjct: 124 MVE-TYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLGM 182

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
             R    D V++ L+GERGREV+EFIE  LG   LK++VVV A +DESP++R      A 
Sbjct: 183 MTRFTEADVVVVGLIGERGREVKEFIECNLGLQGLKRAVVVAAPADESPLMRLHGAKVAT 242

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G 
Sbjct: 243 SIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGN 302

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+SR
Sbjct: 303 GTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASISR 362

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L Q
Sbjct: 363 VMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLAQ 422

Query: 420 SPSDLSSED 428
              +    D
Sbjct: 423 GMDEQVGYD 431


>gi|198274970|ref|ZP_03207502.1| hypothetical protein BACPLE_01129 [Bacteroides plebeius DSM 17135]
 gi|198272417|gb|EDY96686.1| hypothetical protein BACPLE_01129 [Bacteroides plebeius DSM 17135]
          Length = 529

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 98/446 (21%), Positives = 174/446 (39%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  +    +L   + G +  ++     +  L +     + +  +      +G V+ 
Sbjct: 13  EVLLQQLKGIDNSLKFDEVGTVLQVSDGVARIYGL-RNAEANELLQFENG---IMGTVMN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V        I+      GRVI+ LG P+DG   +G   
Sbjct: 69  LEEDNVGAVLLGPTDQIKEGMIVKRTKHIASINVGESMLGRVIDPLGVPLDGRGEIGGEL 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 129 CEMPLERKAPGVIFRQPVTEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 188

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +  A  +  +    I   +G++G  V   +           ++VV AT+ +   ++  AP
Sbjct: 189 NQRANYEAGNPVYCIYVAIGQKGSTVASIVNALREKGAMDYTIVVAATASDPAAMQYFAP 248

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 249 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 308

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 309 RAAKIINQQEVAEQMNDLPASLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 368

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 369 IFLETDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKF 425

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +   A+ +       L Q  
Sbjct: 426 SSDMDSVTAMAIDRGRKNNQLLIQPQ 451


>gi|156530113|gb|ABU75153.1| AtpB [Brucea tenuifolia]
          Length = 488

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|12659371|gb|AAG60220.1| ATPase alpha subunit [Knema kinabaluensis]
          Length = 413

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 90/410 (21%), Positives = 166/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A      ++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKTMTQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 402


>gi|308050033|ref|YP_003913599.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
 gi|307632223|gb|ADN76525.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM
           9799]
          Length = 440

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 155/424 (36%), Positives = 243/424 (57%), Gaps = 8/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G +  +T +      +   +  G+  + + ++   +  +V+  + D + + PV 
Sbjct: 14  PVARIYGRLVRVTGLLL--EAVGCDLGTGERCLVERRDGTMVEAEVVGFHRDTLCLMPVT 71

Query: 77  IGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPP 134
             + +  G  V    G       +   GRV++  G+PIDG   L K   LS  I +  P 
Sbjct: 72  PTDGLVPGARVQPLSGTAPAVIGSGLLGRVLDGCGEPIDGLGPLHKVRSLSGRIHT--PN 129

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R+ ++     G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ L
Sbjct: 130 PLLRRPIDAPLDVGVRAINSLLTVGKGQRLGLFAGSGVGKSVLLGMMTRFTQADIVVVGL 189

Query: 195 VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREVREFI      +  +++VVVVA +D + ++R  A      IA  F  +G +VL
Sbjct: 190 VGERGREVREFIEHSLGPEGRQRAVVVVAPADATALMRLRAMRLCHRIAAGFRDEGHDVL 249

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TR+A + RE+A + GE P  RGYP S F++LP L+E+ G  E  +G++TA+ +V
Sbjct: 250 LLVDSLTRYAQAQREVALSLGEPPATRGYPPSAFTQLPSLVEQAGNGEGGQGSLTALYTV 309

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+ NDP+AD+ R+ILDGHIVL+R+LAE+G +P +D  AS SRLA +    ++   +
Sbjct: 310 LVEGDDQNDPVADAARAILDGHIVLSRALAEQGHFPAIDVNASASRLAAQLVEPEDLAAM 369

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             L HL  R++E R++  +GGY+PG D  LD AV   P I  FL+Q  ++       +E 
Sbjct: 370 QRLRHLNARYQEVRELLPLGGYQPGQDAELDLAVQAQPAIAQFLRQGMNESQDYQASREA 429

Query: 434 TKKL 437
            ++L
Sbjct: 430 LRQL 433


>gi|289425361|ref|ZP_06427138.1| ATP synthase F1, alpha subunit [Propionibacterium acnes SK187]
 gi|289154339|gb|EFD03027.1| ATP synthase F1, alpha subunit [Propionibacterium acnes SK187]
          Length = 545

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLCFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKGV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|257852946|gb|ACV71484.1| ATP synthase beta subunit [Cratoxylum formosum]
          Length = 488

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           GYI+ I      +    + +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GYITQIIGPVLDIAFPPRKMPNIYNALVV---KGRDTIGQEINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    L     +  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPIDDLG-LVDTRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFAGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPKIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|213026792|ref|ZP_03341239.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 507

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 102/437 (23%), Positives = 180/437 (41%), Gaps = 30/437 (6%)

Query: 7   TLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
            +++L +       V       G I S++     +  L+     G+ +   G   +    
Sbjct: 1   EISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG---NRYAI 56

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +G   +++ G  V   GR   +       GRV+N LG PIDG   + 
Sbjct: 57  ALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPVD 116

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
               S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK+ L   
Sbjct: 117 NDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAID 175

Query: 181 FARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
              +  D   K I   +G++   +   +           ++VVVAT+ ES  L+ +AP  
Sbjct: 176 AIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYA 235

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    RLLER 
Sbjct: 236 GCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERA 295

Query: 298 GPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
                             + G++TA+  +     + +  +  +V SI DG I L  +L  
Sbjct: 296 ARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLFN 355

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   +D    
Sbjct: 356 AGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASDLDDATR 412

Query: 405 KAVHQVPIIYDFLKQSP 421
           K +     + + LKQ  
Sbjct: 413 KQLDHGQKVTELLKQKQ 429


>gi|156530181|gb|ABU75187.1| AtpB [Simaba glabra]
          Length = 498

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|71894422|ref|YP_278530.1| F0F1 ATP synthase subunit alpha [Mycoplasma synoviae 53]
 gi|115312255|sp|Q4A602|ATPA_MYCS5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71851210|gb|AAZ43819.1| ATP synthase alpha chain [Mycoplasma synoviae 53]
          Length = 530

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 190/438 (43%), Gaps = 19/438 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N + ++ + +D  KN        + G + SI      V+ L + V   + V+    +
Sbjct: 1   MKNNFDDISAIIKDRIKNFDQKIDRSEVGKVISIGDGIALVSGLDK-VENSEVVIF---D 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           +D  G  + +  + V +   G    IS GD V   G+   +        RV+++LGKPID
Sbjct: 57  NDVYGLALNLEEEAVGVALFGNSNLISEGDSVRRSGQVISVPVGEAMLSRVVDSLGKPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + K     +I    P  M R+ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-KSSKMAKIFKLAPGVMTRKEVNQPLETGIIAIDSMIPVGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        +   +G++   V + ++          + VVVA + ES   +
Sbjct: 176 TAIAIDTIINQKGKNVYCVYVAIGQKNSTVAQIVQKLNDTGSMDYTTVVVAGASESAPQQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTIAE F S+G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYTGVTIAEEFMSQGKDVLVIYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER     K+   G+ITA   +     + +  I  +V SI DG I    SL   G+ P
Sbjct: 296 QLLERAARLNKKYGGGSITAFPIIETQQGDISAYIPTNVISITDGQIFTKESLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K +V SL   + ++ E   +     +   +D      +  
Sbjct: 356 AVDVGFSVSRVGSAAQTKAMKSVVGSLKLELAQYNE---MLAFAQFGSDLDENTKAILEH 412

Query: 410 VPIIYDFLKQSPSDLSSE 427
              +Y+ +KQ      S+
Sbjct: 413 GAKVYELIKQDQYSPISQ 430


>gi|34539223|gb|AAQ74495.1| F1-ATPase alpha subunit [Burchardia multiflora]
          Length = 418

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 164/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R    +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVXVKAPXIIERXSXHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLV 195
           TG++ +D   P+  GQR  +   S  GK+ +      +                 +   +
Sbjct: 117 TGLKXVDSLVPIGRGQRELIIGDSQXGKTAIAIDTIXNXKQIHSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|212637772|ref|YP_002314297.1| ATPase FliI/YscN [Shewanella piezotolerans WP3]
 gi|212559256|gb|ACJ31710.1| ATPase FliI/YscN [Shewanella piezotolerans WP3]
          Length = 447

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 234/421 (55%), Gaps = 10/421 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++ +  +      +   +  GD    + ++   +  +V+    D + + P+   + + 
Sbjct: 20  GRLTRVNGLLL--EAVGCQLGTGDRCYIECRDQHRVEAEVVGFYRDTLCLMPIEPTDGLM 77

Query: 83  LGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V    GR++I       GRV+N LG+P+D    + K    + +  K    + R+ +
Sbjct: 78  PGARVMPIEGRYQIPSGQGLLGRVLNGLGQPLDDLGCI-KHMPHVPLQFKTTNPLLRKPI 136

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++    GIR I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+GERGRE
Sbjct: 137 KEPLDVGIRAINALLPVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGRE 196

Query: 202 VREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREFI++    +  K++VVV A +D +P++R  A      IA  +  +G  VLL++DS+T
Sbjct: 197 VREFIDESLGEEGRKRAVVVAAPADTTPLMRMRAMRLCHQIAAAYRDQGKQVLLLVDSLT 256

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + REIA + GE P  +GYP S F++LP L+E  G S+   G +TA  +VL +GD+ 
Sbjct: 257 RYAQAQREIALSLGEPPATKGYPPSAFAQLPSLVEMAGNSQHPTGTLTAFYTVLTEGDDQ 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPIADS R+ILDGHIVL+R LAE+G +P +D  ASVSRLA +  + +  +      H+ 
Sbjct: 317 QDPIADSARAILDGHIVLSRKLAEQGHFPAIDIAASVSRLATQVANEETLRQGQWFRHIN 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS----PSDLSSEDVFQEITKK 436
            R+ E RD+  +GGY+ G D  +D +V   P +  FLKQ          S D   ++   
Sbjct: 377 SRYNEIRDLLPLGGYQAGHDPEMDLSVSAYPHMATFLKQPITVAADHAHSIDALTQLVNS 436

Query: 437 L 437
           +
Sbjct: 437 M 437


>gi|229593483|ref|YP_002875602.1| F0F1 ATP synthase subunit alpha [Pseudomonas fluorescens SBW25]
 gi|312964000|ref|ZP_07778471.1| ATP synthase subunit alpha [Pseudomonas fluorescens WH6]
 gi|259585433|sp|C3K1E8|ATPA_PSEFS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|229365349|emb|CAY53727.1| ATP synthase alpha chain [Pseudomonas fluorescens SBW25]
 gi|311282035|gb|EFQ60645.1| ATP synthase subunit alpha [Pseudomonas fluorescens WH6]
          Length = 514

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 96/442 (21%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG  +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +     +   +G++   +   +     +     +++V A++ ESP L+ 
Sbjct: 178 ALAIDAIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIIVAASASESPALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|156530209|gb|ABU75201.1| AtpB [Simarouba glauca]
          Length = 475

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 5   GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|156530129|gb|ABU75161.1| AtpB [Eurycoma longifolia]
          Length = 498

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNSRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTSSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ + +  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTXMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|224024069|ref|ZP_03642435.1| hypothetical protein BACCOPRO_00786 [Bacteroides coprophilus DSM
           18228]
 gi|224017291|gb|EEF75303.1| hypothetical protein BACCOPRO_00786 [Bacteroides coprophilus DSM
           18228]
          Length = 529

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 98/443 (22%), Positives = 172/443 (38%), Gaps = 36/443 (8%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L QL    +     + G +  ++     +  L +     + +  +      +G V+ +  
Sbjct: 16  LRQLQGIDTSLKFDEVGTVLQVSDGVARIYGL-RNAEANELLQFENG---IMGTVMNLEE 71

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V    +G  ++I  G +V    R   I+      GRVI+ LG P+DG   +      M
Sbjct: 72  DNVGAVLLGPTDQIKEGMIVKRTRRIASINVGEGMLGRVIDPLGVPMDGRGEISGERFEM 131

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMF 181
            +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK      T+++  
Sbjct: 132 PLERKAPGVIFRQPVTEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQR 191

Query: 182 ARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
           +  +  +    I   +G++G  V   +           +VVV AT+ +   ++  AP   
Sbjct: 192 SNYEAGNPVYCIYVAIGQKGSTVASIVSALREKGAMDYTVVVAATASDPAAMQYFAPFAG 251

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             I EYF   G + L++ D +++ A + RE++           YP  +F    RLLER  
Sbjct: 252 AAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAA 311

Query: 299 PSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
                                  K  G++TA+  +     + +  I  +V SI DG I L
Sbjct: 312 KIISQQEVAEQMNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFL 371

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +   
Sbjct: 372 ETDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKFSSD 428

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D +   A+ +       L Q  
Sbjct: 429 MDPVTAMAIDRGRKNNQLLIQPQ 451


>gi|261344123|ref|ZP_05971767.1| flagellar protein export ATPase FliI [Providencia rustigianii DSM
           4541]
 gi|282567715|gb|EFB73250.1| flagellar protein export ATPase FliI [Providencia rustigianii DSM
           4541]
          Length = 454

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 156/428 (36%), Positives = 234/428 (54%), Gaps = 18/428 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDIVYIC 73
            +V + G ++ IT +      +   + LG     +    G + + + +V+  N   + + 
Sbjct: 23  PMVRRYGRLTKITGLVMEAEGI--KMPLGATCYIERNINGGSDEVVCEVVGFNGARMLLM 80

Query: 74  PVGIGEEISLGDLVFH--------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
           P+   E IS G  V+           R  +       GRV++A G P+DG   L +    
Sbjct: 81  PLSDLEGISPGARVYAQSTGDDGQTSRL-LPIGNELLGRVLDAQGTPLDGKGPL-ETKAR 138

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +++     + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR  
Sbjct: 139 APLITPPINPLERTPIHSVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGMMARFT 198

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D +++ L+GERGREV++FIE+ LG D L+++VVV A +D SP+LR      A  IAEY
Sbjct: 199 QADIIVVGLIGERGREVKDFIENILGADGLRRAVVVAAPADVSPLLRMQGASYATRIAEY 258

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP L+ER G  +   
Sbjct: 259 FRDQGKSVLLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGKN-G 317

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR     
Sbjct: 318 GSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTDL 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            + +  + +     L   ++  RD+  +G Y  G D +LD A+   P +  FL+Q   + 
Sbjct: 378 IAKEHYRKIQRFKQLTSSYQRNRDLINVGAYAMGSDPMLDTAIQYYPRMSKFLQQDIDER 437

Query: 425 SSEDVFQE 432
                  E
Sbjct: 438 CDYQTACE 445


>gi|325297382|ref|YP_004257299.1| ATP synthase subunit alpha [Bacteroides salanitronis DSM 18170]
 gi|324316935|gb|ADY34826.1| ATP synthase subunit alpha [Bacteroides salanitronis DSM 18170]
          Length = 531

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 173/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  +    +L   + G +  ++     +  L +     + +  +      +G V+ 
Sbjct: 14  EVLLQQLQGIDTSLKFDEVGTVLQVSDGVARIYGL-RNAEANELLQFENG---IMGVVMN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  +++  G +V    R   I+      GRVI+ LG P+DG   +    
Sbjct: 70  LEEDNVGAVLLGPTDQVKEGMVVKRTNRIASINVGEGMLGRVIDPLGVPLDGRGEITGDT 129

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TG++ ID   P+  GQR  +      GK      T++
Sbjct: 130 CEMPLERKAPGVIFRQPVTEPLQTGLKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 189

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +     +  D    I   VG++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 190 NQRHNYEAGDPVYCIYVAVGQKGSTVASLVNVLREKGAMDYTIVVAATASDPAALQYFAP 249

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 250 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 309

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 310 RAAKIISQQEVAETMNDLPASLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 369

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 370 IFLETDLFNQGFRPAINVGISVSRVGGSAQVKSMKKVAGTLKIDQAQYRELE---AFSKF 426

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +   A+ +       L Q  
Sbjct: 427 SSDMDPVTAMAIDRGRKNNQLLIQPQ 452


>gi|167579436|ref|ZP_02372310.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           TXDOH]
          Length = 521

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 150/432 (34%), Positives = 225/432 (52%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +     +L     +V+    + +++ P  
Sbjct: 87  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSSLPYAQAEVVGFAGERLFLMPTT 144

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 145 AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWELLGRVVDASGRPLDNLGPL-ASKVDA 203

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 204 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 263

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 264 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 323

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 324 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 383

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR      
Sbjct: 384 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASISRAMTALI 443

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                + V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 444 DDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 503

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 504 PYAPSLAALDAL 515


>gi|156530127|gb|ABU75160.1| AtpB [Eurycoma apiculata]
          Length = 498

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNSRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTSSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|78485780|ref|YP_391705.1| ATPase FliI/YscN [Thiomicrospira crunogena XCL-2]
 gi|78364066|gb|ABB42031.1| Flagellar biosynthesis ATPase FliI [Thiomicrospira crunogena XCL-2]
          Length = 446

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 150/441 (34%), Positives = 242/441 (54%), Gaps = 9/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           +      L++     S NL ++G  +  +     T+  +  Y  +G       KN   + 
Sbjct: 10  LHYKFSELSEQIPQKS-NLQIEGRLVRMVG---MTLEVVGTYAPIGSRCQVLSKNEPPIE 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N D +Y+ P+G    +     V    G  ++  S+   GR+I+  G P+D    
Sbjct: 66  AEVVGFNDDRLYLMPIGKIHGLEPNARVIPVSGGIKVGVSSSMLGRIIDGAGNPLDDKGP 125

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   D  + +       ++R  +++    GI+ I+    L  GQR+G+ AG+G+GKS LL
Sbjct: 126 ISF-DKRVSLNGDKINPLHRAPIKEPLDVGIKTINGLLTLGKGQRVGLLAGTGVGKSVLL 184

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M  R    + V++ LVGERGREV +F+  +   + LK+SVVV   +D+ P++R    + 
Sbjct: 185 GMMTRFTDAEVVVVGLVGERGREVNDFVRNNLGEEGLKRSVVVATPADDPPLMRLHGAML 244

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A ++AEYF  +G NVLL++DS+TRFA + REIA   GE P ++GYP SVF++LP+L+ER 
Sbjct: 245 ATSVAEYFRDQGKNVLLLMDSLTRFAQAQREIALAVGEPPASKGYPPSVFAKLPQLVERA 304

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA+ +VL +GD+ NDP+ DS R +LDGHI+L+R +A+ GRYP +D  AS+
Sbjct: 305 GNGASHSGSITAIYTVLAEGDDQNDPVVDSARGVLDGHILLSRQIADSGRYPAIDIEASI 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+        + KL      L   +++ +D+  IG YR G D  +D+A+ + P +  FL
Sbjct: 365 SRVMIDVVPQQQNKLARRFKQLYSTYQQNQDLISIGAYRKGTDAAIDEAIEKHPQLSHFL 424

Query: 418 KQSPSD-LSSEDVFQEITKKL 437
            QS  +  S ++    +   L
Sbjct: 425 SQSIDESFSVKESLSALESVL 445


>gi|326797430|ref|YP_004315250.1| ATP synthase subunit alpha [Marinomonas mediterranea MMB-1]
 gi|326548194|gb|ADZ93414.1| ATP synthase subunit alpha [Marinomonas mediterranea MMB-1]
          Length = 514

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 104/447 (23%), Positives = 189/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L V       G I S+      +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKKRIETLDVTSDAQNEGTIVSVADGIVLIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  +++  G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVVLGDYQDLVEGQKAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++  +    P  + RQ V++  +TG + ID   P+  GQR  +     IGK+
Sbjct: 119 KGPVN-AQMTDAVEKVAPGVIARQGVDEPVQTGYKAIDSMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            L   ++ A+     K +   +G++   +   +     +     + VVVA + +   ++ 
Sbjct: 178 ALAIDTIIAQKSSGIKCVYVAIGQKQSTIANVVRKLEENGAMEYTTVVVAGAADPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  TI EYF  +G++ L++ D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTIGEYFRDRGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNVEYVEKFTNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            S    G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSSFNAGIRPAMNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ+     S
Sbjct: 415 DEATRKQLEHGKQVTELMKQAQFSPMS 441


>gi|304392606|ref|ZP_07374546.1| ATP synthase F1, beta subunit [Ahrensia sp. R2A130]
 gi|303295236|gb|EFL89596.1| ATP synthase F1, beta subunit [Ahrensia sp. R2A130]
          Length = 513

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 112/416 (26%), Positives = 191/416 (45%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V   S+   + + +      +  + +V   +  + V    +   E + 
Sbjct: 41  GQISQVIGAVVDVHFDSELPPILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATEGLV 100

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+IN +G+P+D    +   + +  I ++ PP + +   
Sbjct: 101 RGQAVSDTGSPIMVPVGEEMLGRIINVIGEPVDEVGPITATE-TRAIHAEAPPYIEQSTN 159

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 160 SEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 219

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +  N+              K+ +V    +E P  R    L+ +TIAE F
Sbjct: 220 TREGNDLYWEMIESNVNVDPNENNGSTTGSKAALVYGQMNEPPGARARVALSGLTIAEDF 279

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG
Sbjct: 280 RDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTTKG 337

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VLNRS+AE+G YP VDPL S SR+ D   
Sbjct: 338 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPLV 397

Query: 366 SAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D    +   +  ++ R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 398 IGDEHYAVAREVQEVLQRYKALQDIIAILGMDELSEED-KIAVARARKIERFLSQP 452


>gi|238809782|dbj|BAH69572.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 528

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 110/438 (25%), Positives = 184/438 (42%), Gaps = 19/438 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + ++ + +D  +N        + G I +I      V  L      G+ ++ +   
Sbjct: 1   MASRTDDISAIIKDRIRNFDSKVDYSEVGTIITIGDGIALVKGL-DNAKNGEIILFKN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +  G V+ +  ++V +   G    +S GD     G    I       GRV+NALG+PID
Sbjct: 58  -NIYGLVLNLEEEVVGVTIFGNANSLSEGDTCKRSGEVISIPVGDKLLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    +  EI    P  M RQ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGKINTT-VKKEIFKVAPGVMTRQEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + ++          + VVV+ + E    +
Sbjct: 176 TAIAIDTIINQKGKNVNCIYVAIGQKNSTVAQIVKKLEDTGAMEYTTVVVSGASELAPQQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP + VTIAE + +KG + L++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGVTIAEEWMTKGKDCLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER     KE   G+ITA+  +     + +  I  +V SI DG I    +L   G+ P
Sbjct: 296 QLLERAARVTKEYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  SL   + ++ E   +     +   +D      +  
Sbjct: 356 AVDVGFSVSRVGSAAQIKAMKKVAGSLKLELAQYNE---MLAFAQFGSDLDDSTKAILQH 412

Query: 410 VPIIYDFLKQSPSDLSSE 427
              +Y+ LKQ      S+
Sbjct: 413 GAKVYEILKQEQYAPISQ 430


>gi|223667983|gb|ACN11587.1| F1-ATPase alpha subunit [Pogonia japonica]
          Length = 421

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 92/404 (22%), Positives = 164/404 (40%), Gaps = 23/404 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILPEANAFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 396


>gi|149178726|ref|ZP_01857309.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797]
 gi|148842424|gb|EDL56804.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797]
          Length = 458

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 151/413 (36%), Positives = 232/413 (56%), Gaps = 8/413 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81
            G ++ +  +  +V+       LG       +N   +  +V+    +   + P      I
Sbjct: 17  TGRVTRVVGLTASVSGF--PAPLGSVCAIDRENGSAVEAEVVGFQNEETLLLPYEDLAGI 74

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V        ++      GRV++  G+ IDG  +         + +K    +NR R
Sbjct: 75  RRGDRVSLIQSVPAVAVGQGILGRVLDGRGRCIDGK-NQAMLSHRANLKAKPISPLNRPR 133

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           ++    TGIR ID       GQR+G+FAGSG+GKSTL+   AR    D  ++ LVGERGR
Sbjct: 134 IDSPLSTGIRTIDGLLTCGKGQRLGIFAGSGVGKSTLMGQMARQSSADINVVCLVGERGR 193

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+  D   + L++SVV+VATSDE  ++R  A   A  ++E+F   G +VLL++DS+
Sbjct: 194 EVREFLDRDLGSEGLERSVVIVATSDEPALIRLRAAHLATAVSEFFRDCGKDVLLMMDSV 253

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + REI   +GE P  RGYP SVFS LP+LLER G +E   G+IT   +VLV+ D+
Sbjct: 254 TRYALAQREIGLAAGEPPATRGYPPSVFSLLPKLLERSGRTES--GSITGFYTVLVEADD 311

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PI+D+VR ILDGHI+L+R LA E  +P +D L S+SR  +   SA+ ++ V+ +  L
Sbjct: 312 ANEPISDTVRGILDGHIMLSRKLAHESHWPAIDVLQSISRSMNDITSAEHQQSVAQIKKL 371

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           +  ++++ D+  IG Y+ G +  +D A+   P+  ++LKQ  ++ S      E
Sbjct: 372 MAAYQQSEDLISIGAYQAGSNPEVDLAIKMRPLWNEYLKQGNTEDSDFHTASE 424


>gi|17367086|sp|Q9TKI7|ATPB_MEDSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5679309|gb|AAD46914.1|AF163770_1 ATP synthase beta subunit [Medicago sativa]
          Length = 490

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ QG   D +GQ I +  ++        V    
Sbjct: 21  GRITQIIGPVLDVVFSPGKMPNIYNALIVQG--RDTVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +  G  S  I    P
Sbjct: 79  MSATDGLKRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|209363699|ref|YP_001423602.2| F0F1 ATP synthase subunit beta [Coxiella burnetii Dugway 5J108-111]
 gi|212211723|ref|YP_002302659.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuG_Q212]
 gi|212217738|ref|YP_002304525.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuK_Q154]
 gi|215919300|ref|NP_820921.2| F0F1 ATP synthase subunit beta [Coxiella burnetii RSA 493]
 gi|206584185|gb|AAO91435.2| ATP synthase beta chain [Coxiella burnetii RSA 493]
 gi|207081632|gb|ABS77940.2| ATP synthase beta chain [Coxiella burnetii Dugway 5J108-111]
 gi|212010133|gb|ACJ17514.1| ATP synthase beta chain [Coxiella burnetii CbuG_Q212]
 gi|212012000|gb|ACJ19380.1| ATP synthase beta chain [Coxiella burnetii CbuK_Q154]
          Length = 483

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 112/426 (26%), Positives = 195/426 (45%), Gaps = 10/426 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M  ++  L    +  ++    + G    I      V      V      +   +N+  L 
Sbjct: 6   MGVSIHRLNSYNKRGNRMTTAKSGTTIEIIGAVVDVEFPRHAVPKVYDALQVDENNLTLE 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
              ++   +V    +G  E +     V +  +   +       GR++N LG+PID    +
Sbjct: 66  VQQQLGDGVVRTIAMGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPI 125

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + I    P  + +    +  +TGI+V+D+  P   G ++G+F G+G+GK+  + 
Sbjct: 126 NSKE-KLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMM 184

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
              R+   +     + + VGER RE  +F  +    N+  K  +V    +E P  R    
Sbjct: 185 ELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVG 244

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L E
Sbjct: 245 LTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGALQE 304

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT++ +V V  D+  DP   +  + LD  +VL+R +AE G YP +DPL 
Sbjct: 305 RI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAERGIYPAIDPLD 362

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR  D      +  ++   +   + R+EE +DI  I G     +    +AV +   I 
Sbjct: 363 STSRQLDPLIIGEEHYRVARGVQETLQRYEELKDIIAILGMDELSEDD-KRAVRRARKIQ 421

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 422 RFLSQP 427


>gi|305665743|ref|YP_003862030.1| ATP synthase subunit A [Maribacter sp. HTCC2170]
 gi|88710507|gb|EAR02739.1| ATP synthase subunit A [Maribacter sp. HTCC2170]
          Length = 526

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 168/437 (38%), Gaps = 37/437 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  +      V  LS     G+ V  +G      G V+ +  D V +  +G  + I
Sbjct: 28  EVGTVLQVGDGIARVYGLS-NAQYGELVEFEGG---LEGIVLNLEEDNVGVVLLGHSKAI 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V    R   I+      GRV++ LG PIDG   +      M +  K P  + RQ 
Sbjct: 84  GEGATVKRTQRIASINVGEGIVGRVVDTLGAPIDGKGPISGDLYEMPLERKAPGVIFRQP 143

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVIIS 193
           V +  ++GI+ ID   P+  GQR  V      GK+T+      +             I  
Sbjct: 144 VTEPLQSGIKAIDAMIPVGRGQRELVIGDRQTGKTTVCIDTILNQKEFYDAGEPVYCIYV 203

Query: 194 LVGERGREVREF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++   V            L  + +V A + +   ++  AP     I EYF   G   
Sbjct: 204 AIGQKASNVANIAKVLEDKGALAYTTIVAANASDPAPMQVYAPFAGAAIGEYFRDTGRPA 263

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE----------- 301
           L+I D +++ A + REI+      P    YP  VF    RLLER                
Sbjct: 264 LIIYDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERAAKVIADDDIAKDMND 323

Query: 302 ---------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
                    K  G++TA+  +     + +  I  +V SI DG I L + L  +G  P ++
Sbjct: 324 LPDALKPLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLEQDLFNQGVRPAIN 383

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  +L     +F E         +   +D      + +   
Sbjct: 384 VGISVSRVGGNAQVKSMKKVAGTLKLDQAQFRELE---AFAKFGSDLDAATLNVIEKGRR 440

Query: 413 IYDFLKQSPSD-LSSED 428
             + LKQ+ +D  + ED
Sbjct: 441 NVEILKQAQNDPFTVED 457


>gi|89112836|gb|ABD61030.1| ATPase alpha subunit [Nothofagus moorei]
          Length = 376

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 157/376 (41%), Gaps = 19/376 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 5   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 64

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 65  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 123

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 124 IDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 183

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 184 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 243

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 244 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFY 303

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A      ++  S    + ++ E   +     +   +D    
Sbjct: 304 RGIRPAINVGLSVSRVGSAAQLKAMIQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQ 360

Query: 405 KAVHQVPIIYDFLKQS 420
             +++   + +  KQ 
Sbjct: 361 ALLNRGARLTEVPKQP 376


>gi|330950818|gb|EGH51078.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           Cit 7]
          Length = 449

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 230/426 (53%), Gaps = 15/426 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +S++  +     C      +GD   V +   S  L +++    +   +  +G  
Sbjct: 22  VRVIGRVSAVRGILL--ECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPP 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDLSM---EIMSKV 132
           + I +G  +   G   RI       G V++  G+P+  D   +    +       +++  
Sbjct: 80  DGIQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGPEDRRTTLPVIADA 139

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
            P   R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++ 
Sbjct: 140 LPPTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVF 199

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGRE+REF+  +      ++SV+V ATSD S + R  A  TA  IAE F ++G  
Sbjct: 200 GLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQK 259

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G SE   G+ITA+ 
Sbjct: 260 VLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALY 317

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++
Sbjct: 318 TVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQR 377

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
             + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      Q
Sbjct: 378 ANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQ 434

Query: 432 EITKKL 437
           E   +L
Sbjct: 435 ETLDRL 440


>gi|313496405|gb|ADR57771.1| AtpA [Pseudomonas putida BIRD-1]
          Length = 514

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDNLDVSSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVILGAYDTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG       +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTQTDA-VEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++  + D     +   VG++   V   +     +     ++VVVA++ ES  L+ 
Sbjct: 178 AMAIDAIINQKDSGIFCVYVAVGQKRSTVANIVRKLEENGALANTIVVVASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|256825631|ref|YP_003149591.1| F0F1 ATP synthase subunit alpha [Kytococcus sedentarius DSM 20547]
 gi|256689024|gb|ACV06826.1| ATP synthase F1 subcomplex alpha subunit [Kytococcus sedentarius
           DSM 20547]
          Length = 549

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 90/415 (21%), Positives = 166/415 (40%), Gaps = 22/415 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +S        V  L       + +         LG  + +++  + +  +G    I
Sbjct: 31  EVGRVSDAGDGIAHVEGL-PSAMTNELLKFADG---TLGLALNLDVHEIGVVVLGDFAGI 86

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV+N LG+PIDG   +  G+    +  + P  + R+ 
Sbjct: 87  EEGMEVRRTGEVLSVPVGDNFLGRVVNPLGEPIDGLGEIQSGE-RRALELQAPSVVERKS 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDK-----V 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+L+     +  D       
Sbjct: 146 VHEPMQTGIKAVDSMVPIGRGQRQLIIGDRQTGKTTVAVDTILNQRRNWESGDVNQQVRC 205

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  + E       +   + + +V A + ++   + +AP T   + +++   G
Sbjct: 206 IYVAIGQKGSTIAEVRRTLEENGALEYTTIVAAPASDAAGFKYLAPYTGSALGQHWMYDG 265

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NI 307
            +VL++ D +++ A + R ++      P    YP  VF    RLLER      + G  ++
Sbjct: 266 KHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDDMGAGSM 325

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A   
Sbjct: 326 TGLPIIETKAGDISAYIPTNVISITDGQIFLESDLFNSGVRPAINVGVSVSRVGGAAQIK 385

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             K +   L   + +F E         +   +D      + +   + + LKQ  S
Sbjct: 386 AMKSVSGRLRTDLAQFREME---AFAMFASDLDAASKAQLARGARMVELLKQPQS 437


>gi|66044464|ref|YP_234305.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. syringae B728a]
 gi|63255171|gb|AAY36267.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. syringae B728a]
          Length = 449

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 230/426 (53%), Gaps = 15/426 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +S++  +     C      +GD   V +   S  L +++    +   +  +G  
Sbjct: 22  VRVIGRVSAVRGILL--ECKIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPP 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDLSM---EIMSKV 132
           + I +G  +   G   RI       G V++  G+P+  D   +    +       +++  
Sbjct: 80  DGIQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGPEDRRTTLPVIADA 139

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
            P   R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++ 
Sbjct: 140 LPPTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVF 199

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGRE+REF+  +      ++SV+V ATSD S + R  A  TA  IAE F ++G  
Sbjct: 200 GLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQK 259

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G SE   G+ITA+ 
Sbjct: 260 VLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALY 317

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+       + ++
Sbjct: 318 TVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQR 377

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
             + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      Q
Sbjct: 378 ANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQ 434

Query: 432 EITKKL 437
           E   +L
Sbjct: 435 ETLDRL 440


>gi|314923492|gb|EFS87323.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL001PA1]
          Length = 505

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKDV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|71734740|ref|YP_273549.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|42561997|gb|AAS20439.1| HrcN [Pseudomonas syringae pv. phaseolicola]
 gi|71555293|gb|AAZ34504.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320322950|gb|EFW79040.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329927|gb|EFW85915.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 449

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 231/437 (52%), Gaps = 15/437 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINL 67
           A  A     + V   G +S++  +     C      +GD   V +   S  L +++    
Sbjct: 11  AHAARLRDYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDL 124
           +   +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D 
Sbjct: 69  ECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDD 128

Query: 125 SM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  
Sbjct: 129 RRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAEL 188

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R  A  TA  
Sbjct: 189 ARNMGCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATA 248

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G S
Sbjct: 249 IAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMS 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+
Sbjct: 309 EN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRI 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + ++  + L  L+  +++   +  +G Y+ G D + D AV     I +FL+Q 
Sbjct: 367 LSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ- 425

Query: 421 PSDLSSEDVFQEITKKL 437
             DL      QE    L
Sbjct: 426 --DLREPVPLQETLDGL 440


>gi|34098601|sp|Q8RK01|HRCN_PSESH RecName: Full=Type III secretion ATP synthase HrcN
 gi|19262914|emb|CAD22886.1| putative ATPase [Pseudomonas syringae pv. phaseolicola]
          Length = 449

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 232/437 (53%), Gaps = 15/437 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINL 67
           A  A     + V   G +S++  +     C      +GD   V +   S  L +++    
Sbjct: 11  AHAARLRDYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDL 124
           +   +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D 
Sbjct: 69  ECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDD 128

Query: 125 SM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  
Sbjct: 129 RRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAEL 188

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D ++  L+GERGRE+REF+  +      ++SV+V ATSD S + R  A  TA  
Sbjct: 189 ARNMGCDVIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATA 248

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G S
Sbjct: 249 IAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMS 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+
Sbjct: 309 EN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRI 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + ++  + L  L+  +++   +  +G Y+ G D + D AV     I +FL+Q 
Sbjct: 367 LSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ- 425

Query: 421 PSDLSSEDVFQEITKKL 437
             DL      QE    L
Sbjct: 426 --DLREPVPLQETLDGL 440


>gi|186477681|ref|YP_001859151.1| FliI/YscN family ATPase [Burkholderia phymatum STM815]
 gi|184194140|gb|ACC72105.1| ATPase, FliI/YscN family [Burkholderia phymatum STM815]
          Length = 547

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 152/439 (34%), Positives = 232/439 (52%), Gaps = 19/439 (4%)

Query: 7   TLAQLAE-DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQ 61
            L  L E +     +   G ++    +      L   + +G  V+ +            +
Sbjct: 102 RLTSLRERNQIARPLRACGRLTRAAGLVLEAVGL--RLAVGSEVMIELPPGSTRTMAEAE 159

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGK 111
           V+  + D +++ P      +  G  V+            G  R+       GRV++A GK
Sbjct: 160 VVGFHGDKLFLMPTTEVAGLLPGARVYPLETAPIADPMAGAKRLPVGWELLGRVVDASGK 219

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG   L   +    + +     ++R+ + K    G+R I+    +  GQR+G+FAGSG
Sbjct: 220 PLDGFGPLNSRN-DAPLTAPTINPLHREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSG 278

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPIL 230
           +GKS LL   AR    + ++I L+GERGREV+EFI +    + L +SVVV A +D SP+L
Sbjct: 279 VGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSVVVAAPADVSPLL 338

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R      A ++AEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++L
Sbjct: 339 RMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 398

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G YP 
Sbjct: 399 PALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPA 458

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR      S            ++ R++  RD+  +G Y  G D +LDKA+   
Sbjct: 459 IDIEASISRAMTALISDAHLDRTRQFKQMLSRYQRNRDLINVGAYSAGRDAVLDKAIALY 518

Query: 411 PIIYDFLKQSPSDLSSEDV 429
           P +  FL+Q   + +  + 
Sbjct: 519 PRMEAFLQQGFRESAGFEA 537


>gi|325275314|ref|ZP_08141267.1| F0F1 ATP synthase subunit alpha [Pseudomonas sp. TJI-51]
 gi|324099562|gb|EGB97455.1| F0F1 ATP synthase subunit alpha [Pseudomonas sp. TJI-51]
          Length = 514

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 185/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDNLDVSSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGS-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVILGAYDTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG       +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTQTDA-VEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++  + D     +   VG++   V   +           ++VVVA++ ES  L+ 
Sbjct: 178 AMAIDAIINQKDSGIFCVYVAVGQKRSTVANIVRKLEETGALANTIVVVASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|6561606|gb|AAF16950.1|AF197618_1 ATPase alpha subunit [Welwitschia mirabilis]
          Length = 397

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 88/385 (22%), Positives = 160/385 (41%), Gaps = 24/385 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  G +V   G    +       GRV++ALG P+DG+ +
Sbjct: 5   GIALNLENENVGIVVFGSDTAIKEGSIVKRTGSIVSVPVGKALLGRVVDALGVPLDGNGA 64

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175
           LG+      + +K P  + R +V +   +G + +D   P+  GQR  +      GK+   
Sbjct: 65  LGEHS-RRRVEAKAPGIIERSKVHEPMLSGYKAVDSLVPIGRGQRELIIGDRQTGKTAIA 123

Query: 176 -------------TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
                           +  A S      +   +G++   V + ++       L  S+VV 
Sbjct: 124 IDIILNQKLQNLARHTAEEASSSSALYCVYVAIGQKRSTVAQLVKILSETSALTYSIVVA 183

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           +T+ +S  L  +AP +   + EYF   G + L+I D +++ A + R+++      P    
Sbjct: 184 STASDSAPLIFLAPYSGCAMGEYFRDNGMHALVIYDDLSKQAVAYRQMSLLLRRPPGREA 243

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 244 FPGDVFYLHSRLLERAAKRSDQTGGGSLTALPVIETQAGDVSAYIPTNVISITDGQICLE 303

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +
Sbjct: 304 TELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSFKLELAQYRE---VAAFAQFGSDL 360

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDL 424
           D      +++   + + LKQ   + 
Sbjct: 361 DAATQALLNRGARLTEVLKQPQYEP 385


>gi|238925245|ref|YP_002938762.1| ATP synthase F1, alpha subunit [Eubacterium rectale ATCC 33656]
 gi|238876921|gb|ACR76628.1| ATP synthase F1, alpha subunit [Eubacterium rectale ATCC 33656]
          Length = 502

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 98/407 (24%), Positives = 172/407 (42%), Gaps = 14/407 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
             + G +  +     T+  +  +   G+ VV         G V  I  + + +   G   
Sbjct: 29  SRETGEVIYVGDGIATIYGI-DHAMYGEIVVFDNG---VKGMVQDIRQNEIGVILFGRDH 84

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V    +   I     + GR+INALG+PIDG   + + D    I ++ P  ++R
Sbjct: 85  GIHEGTKVVRTKKKAGIPVGEGFIGRIINALGEPIDGKGDIKEEDYR-PIENEAPGIVDR 143

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           + V+   +TGI  ID   P+  GQR  +      GK+++ +    +        I   +G
Sbjct: 144 KSVDTPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIATDTIINQKGKDVICIYVAIG 203

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           S+V+ +T+ +   L+ +AP     +AE+F  +G +VL++
Sbjct: 204 QKASTVAKIVSTLTKHGAMDYSIVLSSTASDPASLQYIAPYAGTAMAEHFMHQGKDVLIV 263

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R ++      P    YP  VF    RLLER      E   G+ITA+  +
Sbjct: 264 YDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRLSDELGGGSITALPII 323

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L  +L   G  P V+   SVSR+   A +   KK  
Sbjct: 324 ETQAGDVSAYIPTNVISITDGQIFLESNLFNAGMRPAVNVGLSVSRVGGAAQTKAMKKAS 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            S+   + ++ E     +   +   +D      +     + + LKQ 
Sbjct: 384 GSIRIDLAQYREME---VFTQFASDLDDATKAQLAHGKALMELLKQP 427


>gi|34539473|gb|AAQ74620.1| F1-ATPase alpha subunit [Wurmbea sp. Conran et al. 899]
          Length = 418

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +   + V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQASEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +    +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGAWRDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQIHSRGTRESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|4995844|emb|CAB44277.1| H(+)-transporting ATP synthase [Sarcolaena sp. Chase 903]
          Length = 479

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      VT    +   + + +V +G+  D LGQ I +  ++        V    
Sbjct: 10  GRISQIIGPVLDVTFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 68  MSATDGLMRGMEVINTGTPLSVPVGGVTLGRIFNVLGEPIDELGPVDTXTTS-PIHKPAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 127 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFAGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 D-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   A+  +    +   + R++E +DI  + G     +      V +   I  FL Q 
Sbjct: 365 QXRIVGAEHYETAQRVKQTLQRYKELQDIIAVLGLDELSEED-RLTVARAXKIERFLSQP 423


>gi|184200628|ref|YP_001854835.1| F0F1 ATP synthase subunit alpha [Kocuria rhizophila DC2201]
 gi|226739899|sp|B2GLY8|ATPA_KOCRD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|183580858|dbj|BAG29329.1| ATP synthase alpha chain [Kocuria rhizophila DC2201]
          Length = 541

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 176/447 (39%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L   A  Y    V  V+ G +SS       V  L   V   + +  +      LG  +
Sbjct: 13  SALNDFAASYDPGNVERVEVGRVSSAADGIAHVEGL-PSVMANELLKFENG---VLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G  + I  G  V   G    +     + GRV++ LG+P+D    +   
Sbjct: 69  NLDTRDIGVVVLGDFQGIEEGQEVHRTGEVLSVPVGEGYLGRVVDPLGEPLDDLGPI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           D   E+  + P    R+ V +  +TGI+ ID   P+  GQR  +      GK       +
Sbjct: 128 DGRRELELQAPGVTMRKSVHEPLQTGIKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDAI 187

Query: 178 LSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           L+  +  +  D       I   VG++   +    +    +   + + +V A + ES  L+
Sbjct: 188 LNQRSNWESGDVEKQVRCIYVAVGQKASTIAAVRQTLEDNGALEYTTIVAAPASESAGLK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYAGSAIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   +  +   +       +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGAAQVKAMKKVSGTLKLDLASYRSMQ---AFAMFASDLDAASRQQLTR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   +     D    I  
Sbjct: 425 GERLMELLKQPQYTPYPVADQVVSIWA 451


>gi|228016680|gb|ACP51508.1| ATP synthase CF1 alpha subunit [Pinus aristata]
          Length = 507

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 99/424 (23%), Positives = 172/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PIDG        
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGXXXXXXXX 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       ++R+ V    +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 XXXXXXXXX-XXISRRSVXXPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKEVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|121596091|ref|YP_987987.1| flagellar protein export ATPase FliI [Acidovorax sp. JS42]
 gi|120608171|gb|ABM43911.1| flagellar protein export ATPase FliI [Acidovorax sp. JS42]
          Length = 455

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 155/441 (35%), Positives = 232/441 (52%), Gaps = 27/441 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEE 80
             G ++ +T +    T +   V +G     Q    +  L +V+    D  Y+ P G    
Sbjct: 16  TRGTLTRLTGLVLEATGI--RVPVGSQCQVQMNGQEPVLAEVVGFAGDTAYLMPAGDIHG 73

Query: 81  ISLGDLVFH---------------------WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +S G  V                        G   +       GRV+++ G P+D    L
Sbjct: 74  LSSGASVMPAPAYVPALHLGAAPVEEAGAGVGALLLPMGDGLLGRVVDSQGNPLDHAGPL 133

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  +  +   AM R  V +   TG+R I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 134 AQV-TAQPMDRRPINAMERDPVREPLDTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLG 192

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D +++ L+GERGREV+EF+ED LG  +  ++VVV A +D  P+LR      A
Sbjct: 193 MMARYTQADVIVVGLIGERGREVKEFVEDILGVQDRGRAVVVAAPADAPPLLRMQGAAYA 252

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE+F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G
Sbjct: 253 TAIAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSG 312

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE G YP +D   S S
Sbjct: 313 NGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRALAESGHYPAIDIEQSAS 372

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+          +L      +  R++++RD+  +G Y  G D  LD+A+   P +  FL+
Sbjct: 373 RVMHNVVPRAHFELARGFRAVYSRYQKSRDLIQVGAYMSGSDPQLDEAIRLQPGMTAFLQ 432

Query: 419 QSPSDLSS-EDVFQEITKKLQ 438
           QS  + +  +D    + + L+
Sbjct: 433 QSMFEAAPMDDSIAAMGQALE 453


>gi|34539225|gb|AAQ74496.1| F1-ATPase alpha subunit [Burmannia lutescens]
          Length = 417

 Score =  290 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGXNE-IQAGEMVEFA---SGVKGIALNLENEXVGIVVXGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQIISEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|304382811|ref|ZP_07365294.1| ATP synthase F1 sector alpha subunit [Prevotella marshii DSM 16973]
 gi|304335996|gb|EFM02243.1| ATP synthase F1 sector alpha subunit [Prevotella marshii DSM 16973]
          Length = 529

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 94/444 (21%), Positives = 168/444 (37%), Gaps = 37/444 (8%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L QL +   +    + G +  ++     +  L +     + +  +      +  V+ +  
Sbjct: 15  LKQLQDLSDEAQFDEVGTVLQVSDGVARIYGL-KNAEANELLEFENG---TMAIVMNLEE 70

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LS 125
           D V    +G    I  G +V    R   I  +    GRVIN LG+ IDG   L   +   
Sbjct: 71  DNVGCVLLGTTSGIKEGMVVKRTKRIASIRVNDHMLGRVINPLGEAIDGKGELDLSESFE 130

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M +  K P  + RQ V++  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 131 MPLDRKAPGVIFRQPVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQ 190

Query: 186 CF-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
                       I   +G++   V   +           ++VV AT+ +   ++  AP  
Sbjct: 191 KSFYEAGKPVYCIYVAIGQKASTVAALVSTLKEHGAMAYTIVVSATAADPAAMQYYAPFA 250

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              I EYF  +G+  L++ D +++ A + RE++           YP  VF    RLLER 
Sbjct: 251 GAAIGEYFRDRGEAALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERA 310

Query: 298 GPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
                +                     G++TA+  +     + +  I  +V SI DG I 
Sbjct: 311 ARINDQQEVAEQMNDLPACLKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIY 370

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L  +G  P ++   SVSR+   A     KK+  +L   + ++ E         +  
Sbjct: 371 LESDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDMAQYRELE---AFSKFSS 427

Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421
            +D +    + +       L Q  
Sbjct: 428 DMDAVTAMTLDRGRKNNQLLIQPQ 451


>gi|164685624|gb|ABY66758.1| atp1 [Epidendrum sp. CWD 94.10]
          Length = 413

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 163/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    +  GDLV  
Sbjct: 1   GDGIARVFGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAMKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQYMAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|148975562|ref|ZP_01812433.1| F0F1 ATP synthase subunit alpha [Vibrionales bacterium SWAT-3]
 gi|145964990|gb|EDK30241.1| F0F1 ATP synthase subunit alpha [Vibrionales bacterium SWAT-3]
          Length = 513

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 108/448 (24%), Positives = 187/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L  +      V       G I S+     T+  L+  V  G+ +   G  
Sbjct: 1   MQLNSNEISDLIRERISQFNVSTEARNEGTIVSVRDGIITINGLAD-VMQGEMIELPGG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + ++   V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --KYALALNLDTHSVGAVVMGPYIDLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  + R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVS-CDRLDPVEVIAPGVIERKSVDQPIQTGYKAVDTMVPIGRGQRELIIGDRQAGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L   ++  + D   K +   +G++   +   +      D LK ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHDALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG + L
Sbjct: 296 RLLERAARVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQVFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A     KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNAGLRPAVDPGISVSRVGGAAQCKIIKKLSGGIRTSLAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D +  K +     + + +KQ      S
Sbjct: 413 LDEMTRKQLDHGERVTELMKQKQYSPMS 440


>gi|3273590|gb|AAC24777.1| F1-ATPase alpha subunit [Smilax rotundifolia]
          Length = 421

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRXTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++   R +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQY---RXVAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|261366296|ref|ZP_05979179.1| ATP synthase F1, alpha subunit [Subdoligranulum variabile DSM
           15176]
 gi|282571894|gb|EFB77429.1| ATP synthase F1, alpha subunit [Subdoligranulum variabile DSM
           15176]
          Length = 679

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 103/425 (24%), Positives = 178/425 (41%), Gaps = 14/425 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           Q   +    L+      +  + G +  I      V+ L ++   G+ V  +       G 
Sbjct: 180 QLAAQMKEALSGSAGDTMATETGRVLEIGDGIANVSGL-RHAVYGERVEFENG---TAGL 235

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120
           ++ +      +  +G  E ++ G LV   GR   +       GR +NALG+PIDG   + 
Sbjct: 236 ILDLRRKRTGVVLLGSAEGLTEGSLVRRTGRPADVPVGEALIGRTVNALGQPIDGLGPID 295

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             + +  I  +    ++R+ V +  +TGI  ID   P+  GQR  +      GK+++ + 
Sbjct: 296 CTE-TRPIEHEASGVVSREPVTQPMQTGILAIDAMVPIGRGQRELIIGDRQTGKTSIATD 354

Query: 181 FARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
              +        I   +G++   V    E          S++V A + E   ++ +AP  
Sbjct: 355 AILNQKGQDMICIYVAIGQKASTVARLRETLKKHGAMEYSIIVSAPAAEGASMQYIAPYA 414

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              + EYF SKG +VL++ D +++ A + R ++      P    YP  VF    RLLER 
Sbjct: 415 GAAMGEYFMSKGKDVLIVYDDLSKHAVAYRTLSLLLRRSPGREAYPGDVFYLHSRLLERA 474

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
               KE   G++TA+  V     + +  I  +V SI DG I L   L   G+ P V+   
Sbjct: 475 CRLTKEYGGGSMTALPIVETQAGDVSAYIPTNVISITDGQIYLESGLFFSGQRPAVNVGL 534

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A +   KK   +L   + R+ E     +   +   +D    +A+     +  
Sbjct: 535 SVSRVGGAAQTRAIKKTAGTLRIDLARYRELE---VFTQFSSDLDAETRQALDHGKRMMA 591

Query: 416 FLKQS 420
            L+Q 
Sbjct: 592 LLRQP 596


>gi|86141102|ref|ZP_01059661.1| ATP synthase subunit A [Leeuwenhoekiella blandensis MED217]
 gi|85833044|gb|EAQ51493.1| ATP synthase subunit A [Leeuwenhoekiella blandensis MED217]
          Length = 526

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 108/450 (24%), Positives = 172/450 (38%), Gaps = 37/450 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   +   + + G + ++      V  LS     G+ V   G      G V+ +  D
Sbjct: 15  KQLSGFEASASLDEVGTVLTVGDGIARVYGLS-NAQYGELVEFDGG---LEGIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G  +E+  G  V    R   I+      GRV+N LG+PIDG  ++      M 
Sbjct: 71  NVGVVLLGPSKEVKEGATVKRTQRIASINVGEGIVGRVVNTLGQPIDGKGAIEGETYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIYRQPVNEPLQTGIKSIDAMIPVGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     I   VG++   V               + +V A + +   ++  AP    
Sbjct: 191 FYDAGEPVYCIYVAVGQKASTVAGIASVLEEKGAMAYTTIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFFLHSRLLERAAK 310

Query: 300 SE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
                                 K  G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 311 VIADDDIAKNMNDLPDSLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLD 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L      F E         +   +
Sbjct: 371 GDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVSGTLKLDQAAFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPS-DLSSED 428
           D      + +     + LKQ+ +   + ED
Sbjct: 428 DAATLSVIEKGKRNVEILKQAENTPYTVED 457


>gi|60117144|ref|YP_209607.1| ATP synthase F1 subunit alpha [Polysphondylium pallidum]
 gi|51339708|gb|AAU00622.1| ATP synthase F1 subunit alpha [Polysphondylium pallidum]
          Length = 533

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 15/406 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G +  I      V+ L++ + +G+ V   GKN    G  + +  + V I   G  + I 
Sbjct: 49  FGKVLFIKDGVVKVSGLNK-IKIGEKVEFLGKN--LFGMALNLEANSVGIVIFGEDKLIH 105

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQ 139
            G +V    + F I       GRV++ LG+PIDG + + +   +  I    K P  + R+
Sbjct: 106 EGVIVKRCDQNFAIKIDRTMLGRVVDVLGQPIDGKNEIKETKNARLISLERKAPGIVTRK 165

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
            V +   TG++++D   P+  GQR  +      GKS +      +   +K II +   VG
Sbjct: 166 SVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSAIAIDAILNQKTNKDIICVYVSVG 225

Query: 197 ERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   +R  +E   +   L  S+VVV+T+ ++  L+ +AP +   I E+F  KG++ L+I
Sbjct: 226 QKKSTIRRLVEMLNMKGALDYSIVVVSTASDASPLQFLAPYSGCAIGEFFRDKGEHALII 285

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI--TAVISV 313
            D +++ A + R+++      P    YP  VF    RLLER     ++ G+   TA   +
Sbjct: 286 YDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAAKLNEKYGSGSLTAFPII 345

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L + L  +G  P V+   SVSR+   A SA  K+L 
Sbjct: 346 ETQAGDVSAYIPTNVISITDGQIFLEKDLFNKGIRPAVNVGLSVSRVGSAAQSAVMKRLA 405

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +L   + ++ E   +     +    D +    + +  I+ + LKQ
Sbjct: 406 GALKLELAQYRE---LARFEQFSSNNDAVTTAILKKGKIVIEMLKQ 448


>gi|297626243|ref|YP_003688006.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
           sector subunit alpha) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922008|emb|CBL56570.1| ATP synthase subunit alpha (ATPase subunit alpha) (ATP synthase F1
           sector subunit alpha) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 568

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 92/414 (22%), Positives = 176/414 (42%), Gaps = 21/414 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G++++       V  L   V   + +         +G  + ++   + +  +G  E I
Sbjct: 54  EVGHVTTSGDGIARVEGL-PNVMANELLRFDNG---TMGIALNLDEREIGVVVLGESEGI 109

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G +V   G    +     + GRV++A+G PIDG  ++        +  + P  M+RQ 
Sbjct: 110 DEGSIVRGTGEILSVPVGDGYLGRVVDAMGNPIDGKGAIDGIAGRRALELQAPGVMDRQE 169

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD----------CFDKV 190
           V +   TG++ +D   P+  GQR  +      GK+ + +    +              + 
Sbjct: 170 VTEPLMTGLKAVDSMIPIGRGQRELIIGDRKTGKTAIATDTIINQLDNWRSGDPKKQVRC 229

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   VG++   V E  E+         +V+V A + +    + +AP +  +I +++  +G
Sbjct: 230 IYVAVGQKNTTVAEVHENLRKAGAMEYTVIVNAPASDPAGFKYIAPYSGSSIGQHWMYEG 289

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +T+ A + R ++      P    YP  VF    RLLER      E   G++
Sbjct: 290 KHVLIVFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSM 349

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  V    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A + 
Sbjct: 350 TGLPIVETKANDISAYIPTNVISITDGQIFLLSDLFNANQRPAVDVGNSVSRVGGAAQTK 409

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             KK+  +L   + ++   RD++    +   +D    + + +   + + L+Q  
Sbjct: 410 AMKKVSGTLKIDLAQY---RDMQAFAMFASDLDATSRRQLDRGARLTELLRQQQ 460


>gi|315084745|gb|EFT56721.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL027PA2]
          Length = 545

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 92/439 (20%), Positives = 176/439 (40%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKGV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQS       +
Sbjct: 426 GARLMELLKQSQFSPYPVE 444


>gi|283782161|ref|YP_003372916.1| ATP synthase F1, alpha subunit [Pirellula staleyi DSM 6068]
 gi|283440614|gb|ADB19056.1| ATP synthase F1, alpha subunit [Pirellula staleyi DSM 6068]
          Length = 504

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 178/428 (41%), Gaps = 17/428 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E Y   L V + G +  +      V  LS  V  G+ V   G      G    
Sbjct: 10  SVIQQEIERYESQLDVREVGTVLEVGDGIARVYGLS-GVMAGEMVEFPGG---VTGVAFN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V +  +G   +I+ GD V   G+   +       GRV++ LG P+DG   L   +
Sbjct: 66  LEENSVGVIILGDYLQINEGDEVRALGKLLSVPVGPAVIGRVLDPLGNPLDGKGPLVTTE 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            + E+ +  P    RQ V++  +TGI+ +D  TP+  GQR  +      GK+T+   ++ 
Sbjct: 126 -TREVETMAPGVAERQPVKEPLQTGIKAVDAMTPIGRGQRELIIGDRKTGKTTIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + +   K     VG++   VR  I+          + V+VA +     L+ +AP +   
Sbjct: 185 NQKNSGVKCFYVAVGQKDSSVRNVIQVLEEHGAMEYTTVIVAGASSPAPLQYVAPYSGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF   G + L++ D +++ A + R+++      P    +P  VF    RLLER    
Sbjct: 245 MAEYFMYNGQHALIVYDDLSKQAVAYRQLSLLMRRPPGREAFPGDVFYCHSRLLERSAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G++T++  +       +  I  +V SI DG I L   L  +G  P ++   SVS
Sbjct: 305 SAELGGGSLTSLPIIETLEGEVSAYIPTNVISITDGQIYLQPDLFFKGIRPAMNVGISVS 364

Query: 359 RLADKAWSADE--KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           R+   A       K+    L   +  F E      +G     +D      + +   + + 
Sbjct: 365 RVGGAAQIKAMKDKQAAGGLRLALAAFRELEAFAQLG---TDLDAATQGRLDRGYRMVEL 421

Query: 417 LKQSPSDL 424
           LKQ     
Sbjct: 422 LKQPQFQP 429


>gi|156530211|gb|ABU75202.1| AtpB [Simarouba glauca]
          Length = 484

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|156530183|gb|ABU75188.1| AtpB [Simaba cedron]
          Length = 479

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|170026119|ref|YP_001722624.1| type III secretion system ATPase [Yersinia pseudotuberculosis
           YPIII]
 gi|169752653|gb|ACA70171.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII]
          Length = 445

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 162/411 (39%), Positives = 227/411 (55%), Gaps = 10/411 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I  I       +     V  G+    + +    L +V+ I  ++  + P    + 
Sbjct: 28  RYRGPIVEIGPTLLRASL--PNVAQGELCRIEPQG--MLAEVVSIEQEMALLSPFASSDG 83

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+   A   GR+++ LG PIDG   L       E+    P  + RQ
Sbjct: 84  LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPL--TGQWRELDCPPPSPLTRQ 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            VE+   TG R ID       GQRIG+FA +G+GKSTLLSM       D ++++L+GERG
Sbjct: 142 PVEQMLTTGGRAIDGILSCGEGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERG 201

Query: 200 REVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+E     +   ++VVVVATSD   + R     TA T+AEYF  +G  VLL+ DS
Sbjct: 202 REVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTATTVAEYFRERGLKVLLLADS 261

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TR+A + REI   +GE P A  +P SVF+ LPRLLER G S+  +G+ITA  +VLV+GD
Sbjct: 262 LTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSD--RGSITAFYTVLVEGD 319

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  SA +  +   L  
Sbjct: 320 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRR 379

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           ++  ++E   +  IG Y+ G DL  D+A+ + P I  FL+Q  S     D 
Sbjct: 380 MLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAFLQQDHSLTRDPDT 430


>gi|152998457|ref|YP_001343292.1| F0F1 ATP synthase subunit beta [Marinomonas sp. MWYL1]
 gi|190358234|sp|A6W3S8|ATPB2_MARMS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|150839381|gb|ABR73357.1| ATP synthase F1, beta subunit [Marinomonas sp. MWYL1]
          Length = 458

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G+I  +      V      V  + D +  +GK      Q  ++   IV    +G  +
Sbjct: 1   MSSGHIVQVIGAVMDVEFPRDSVPKVYDALTIEGKQLVLEVQ-QQLGDGIVRTIAMGSTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G +V +  +   +       GR+++ LG PID    +G+ +    I    P    +
Sbjct: 60  GIKRGLVVENTNKPVSVPVGTKTLGRIMDVLGNPIDEKGPIGEEE-RWSIHRSAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 SSSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 179 GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  S LD  +VL+R +A  G YP +DPL S SR  D      +   + 
Sbjct: 297 VPADDLTDPSPATTFSHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +    + V++   I  FL Q 
Sbjct: 357 RGVQMVLQRYKELKDIIAILGMDELSEED-KQTVNRSRKIQRFLSQP 402


>gi|34539455|gb|AAQ74611.1| F1-ATPase alpha subunit [Tasmannia lanceolata]
          Length = 413

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 166/408 (40%), Gaps = 23/408 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 KLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 400


>gi|15425560|emb|CAC60400.1| ATP synthase beta subunit [Brunonia australis]
          Length = 477

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 17  GRITQIIGPVLDVAFPPGKMPNIYNALVVKGL--DPLGQPINVTCEVQQLLGNNRVRTVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 75  MSATDGLTRGMGVIDTGVPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +N       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 134 AFINLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFAGVGERTREGNDLYKEMKESGVINEENFAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPLIVGDEHYEIAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|189017690|gb|ACD71514.1| F1-ATPase alpha subunit [Burmannia madagascariensis]
          Length = 400

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|34539449|gb|AAQ74608.1| F1-ATPase alpha subunit [Syngonanthus flavidulus]
          Length = 407

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 88/402 (21%), Positives = 160/402 (39%), Gaps = 22/402 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G    +  + V +   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGLVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG P+DG  +L   +    +  K P  + RQ V +  +TG++ +
Sbjct: 57  VDVPAGKALLGRVVDALGVPLDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVGERGREV 202
           D   P+  GQR  +      GK+ +      +                +   +G++   V
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKGTESETLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++          S++V AT+ +   L+ +AP +   + E F     + L+I D +++
Sbjct: 176 AQLVQILEEAMAMEYSILVAATASDPAPLQFLAPYSGCAMGEDFRDNRMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIGTQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 356 LAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 394


>gi|222112247|ref|YP_002554511.1| ATPase flii/yscn [Acidovorax ebreus TPSY]
 gi|221731691|gb|ACM34511.1| ATPase FliI/YscN [Acidovorax ebreus TPSY]
          Length = 467

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 155/441 (35%), Positives = 231/441 (52%), Gaps = 27/441 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEE 80
             G ++ +T +    T +   V +G     Q    +  L +V+    D  Y+ P G    
Sbjct: 28  TRGTLTRLTGLVLEATGI--RVPVGSQCQVQMNGQEPVLAEVVGFAGDTAYLMPAGDIHG 85

Query: 81  ISLGDLVFH---------------------WGRFRISPSACWCGRVINALGKPIDGDDSL 119
           +S G  V                        G   +       GRV+++ G P+D    L
Sbjct: 86  LSSGASVMPAPAYVPALQLGAAPVEEAGAGVGALLLPMGDGLLGRVVDSQGNPLDHAGPL 145

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +   +  +      AM R  V +   TG+R I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 146 TQV-TAQPMDRSPINAMERDPVREPLDTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLG 204

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D +++ L+GERGREV+EF+ED LG  +  ++VVV A +D  P+LR      A
Sbjct: 205 MMARYTQADVIVVGLIGERGREVKEFVEDILGVQDRGRAVVVAAPADAPPLLRMQGAAYA 264

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE+F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G
Sbjct: 265 TAIAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSG 324

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE G YP +D   S S
Sbjct: 325 NGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRALAESGHYPAIDIEQSAS 384

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+          +L      +  R++++RD+  +G Y  G D  LD+A+   P +  FL+
Sbjct: 385 RVMHNVVPRAHFELARGFRAVYSRYQKSRDLIQVGAYMSGSDPQLDEAIRLQPGMTAFLQ 444

Query: 419 QSPSDLSS-EDVFQEITKKLQ 438
           QS  + +  +D    + + L+
Sbjct: 445 QSMFEAAPMDDSIAAMGQALE 465


>gi|254359685|ref|ZP_04975956.1| flagellum-specific ATP synthase FliI [Burkholderia mallei
           2002721280]
 gi|148028899|gb|EDK86831.1| flagellum-specific ATP synthase FliI [Burkholderia mallei
           2002721280]
          Length = 522

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 149/432 (34%), Positives = 223/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+    + +++ P  
Sbjct: 88  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSALPYAQAEVVGFAGERLFLMPTT 145

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 146 AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDNLGPL-ASKVDA 204

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 205 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 264

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 265 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 324

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 325 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 384

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGH+VL+RSLAE G YP +D  AS+SR      
Sbjct: 385 SITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDIEASISRAMTALI 444

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 445 DDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 504

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 505 PYAPSLAALDAL 516


>gi|7620561|gb|AAF64667.1| F1 ATPase alpha subunit [Gnetum ula]
          Length = 412

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 92/406 (22%), Positives = 171/406 (42%), Gaps = 26/406 (6%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V+ L++ +  G+ V     +S   G  + +  + V I   G    I  G +V  
Sbjct: 1   GDGIARVSGLNK-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIIEGSIVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG+ ++ +  L   + +K P  + R+ V +  +TG
Sbjct: 57  TGSIVSVPVGKAMLGRVVDALGVPIDGNGNVSEHSLQR-VEAKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--------------SMFARSDCFDKVIISL 194
            + +D   P+  GQR  +      GK+ +               +  A S      +   
Sbjct: 116 YKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRTFISANKGADSAKVLYCVYVA 175

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V + ++       L+ S+VV AT+ +S  L+ +AP +   + EYF   G + +
Sbjct: 176 IGQKRSTVAQLVQILSETSALEYSIVVAATASDSAPLQFLAPYSGCAMGEYFRDNGMHAV 235

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVI 311
           +I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+ 
Sbjct: 236 IIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALP 295

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K+
Sbjct: 296 IIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQ 355

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           +  S    + ++ E   +     +   +D      + +   + + L
Sbjct: 356 VCGSFKLELAQYRE---VAAFAQFGSDLDAPTQALLQRGARLTEVL 398


>gi|308189783|ref|YP_003922714.1| ATP synthase alpha chain [Mycoplasma fermentans JER]
 gi|319777001|ref|YP_004136652.1| ATP synthase subunit alpha [Mycoplasma fermentans M64]
 gi|307624525|gb|ADN68830.1| ATP synthase alpha chain [Mycoplasma fermentans JER]
 gi|318038076|gb|ADV34275.1| ATP synthase subunit alpha [Mycoplasma fermentans M64]
          Length = 528

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 110/438 (25%), Positives = 184/438 (42%), Gaps = 19/438 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + ++ + +D  +N        + G I +I      V  L      G+ ++ +   
Sbjct: 1   MASRTDDISAIIKDRIRNFDSKVDYSEVGTIITIGDGIALVKGL-DNAKNGEIILFKN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +  G V+ +  ++V +   G    +S GD     G    I       GRV+NALG+PID
Sbjct: 58  -NIYGLVLNLEEEVVGVTIFGNANSLSEGDTCKRSGEVISIPVGDKLLGRVVNALGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    +  EI    P  M RQ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGKINTT-VKKEIFKVAPGVMTRQEVNQPLETGIIAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +        I   +G++   V + ++          + VVV+ + E    +
Sbjct: 176 TAIAIDTIINQKGKNVNCIYVAIGQKNSTVAQIVKKLEDTGAMEYTTVVVSGASELAPQQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP + VTIAE + +KG + L++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGVTIAEEWMAKGKDCLIVYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER     KE   G+ITA+  +     + +  I  +V SI DG I    +L   G+ P
Sbjct: 296 QLLERAARVTKEYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTKENLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  SL   + ++ E   +     +   +D      +  
Sbjct: 356 AVDVGFSVSRVGSAAQIKAMKKVAGSLKLELAQYNE---MLAFAQFGSDLDDSTKAILQH 412

Query: 410 VPIIYDFLKQSPSDLSSE 427
              +Y+ LKQ      S+
Sbjct: 413 GAKVYEILKQEQYAPISQ 430


>gi|296103561|ref|YP_003613707.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058020|gb|ADF62758.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 456

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 237/428 (55%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   V + ++     +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCVIERQDGQETREVESEVVGFNGQRLFLMPL 82

Query: 76  GIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+             ++       GRV++  GKP+DG  +    + +  
Sbjct: 83  EEVEGILPGARVYAKNIIGDGLQSGKQLPLGPALLGRVLDGSGKPLDGLPAPDTTE-TGA 141

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           ++++    + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 142 LITQPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQA 201

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 202 DVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 261

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 262 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGS 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      +
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALIT 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
                 V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + + 
Sbjct: 382 EKHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAISLWPQLEAFLQQGIFERAD 441

Query: 427 -EDVFQEI 433
            ED  Q +
Sbjct: 442 WEDSIQAL 449


>gi|70729033|ref|YP_258767.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf-5]
 gi|68343332|gb|AAY90938.1| flagellum-specific ATP synthase FliI [Pseudomonas fluorescens Pf-5]
          Length = 452

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 151/408 (37%), Positives = 223/408 (54%), Gaps = 13/408 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVGIGE 79
           G +  +  +      L     +G   +    +S        +V+  +   V++ PVG   
Sbjct: 29  GRLLRMVGLTLEAEGL--RAAMGTRCMVINDDSYHPVKVEAEVMGFSGSKVFLMPVGSVA 86

Query: 80  EISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            I+ G  V      GR          GRV++  G+ +DG  ++   D  + +       +
Sbjct: 87  GIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRALDGKGAMRAEDW-VPMDGPTINPL 143

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ L+G
Sbjct: 144 KRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIG 203

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NVLL+
Sbjct: 204 ERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLL 263

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REIA   GE P  +GYP SVF++LP+L+ER G +E   G+ITA  +VL 
Sbjct: 264 MDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSITAFYTVLS 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S D       
Sbjct: 324 EGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVISPDNMARAQY 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              L  R+++ RD+  +G Y  G D   D A+   P +  +L+Q  +D
Sbjct: 384 FKQLWSRYQQARDLISVGAYVAGGDRDTDTAISLHPAMVAYLRQGLND 431


>gi|89112892|gb|ABD61058.1| ATPase alpha subunit [Tradescantia sp. Qiu 96059]
          Length = 377

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSDTLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             SL   + ++ E       G
Sbjct: 356 CGSLKLELAQYREVAAFAQFG 376


>gi|34539165|gb|AAQ74466.1| F1-ATPase alpha subunit [Agave bracteosa]
          Length = 393

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 91/401 (22%), Positives = 163/401 (40%), Gaps = 23/401 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + ++ E   +     +   +D       ++   + +  KQ
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQ 393


>gi|307131226|ref|YP_003883242.1| type III secretory pathway, ATPase HrcN [Dickeya dadantii 3937]
 gi|306528755|gb|ADM98685.1| type III secretory pathway, ATPase component HrcN [Dickeya dadantii
           3937]
          Length = 460

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 147/428 (34%), Positives = 228/428 (53%), Gaps = 16/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V + G I  I+ +    +       +GD   V +  +S  L +++  + +  ++  +G  
Sbjct: 32  VTRQGQIIGISGILLESSL--PNARIGDLCLVARDDSSQVLAEIVGFSPENTFLSALGAL 89

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI-DGD-----DSLGKGDLSMEIMSK 131
           + I+ G +V        +  S    G V++  G+P+ DG      +        + ++  
Sbjct: 90  DGIAQGAVVTPLYQPHCVQVSDALFGSVLDGFGRPLEDGGHSAFVEPGSLNATPIPVIGD 149

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP   R R+     TG+R ID    +  GQR+GVFAG+G GK+TLL+  AR+   D ++
Sbjct: 150 APPPTERPRIADPLPTGMRAIDGLLTIGCGQRVGVFAGAGCGKTTLLAELARNTPCDAIV 209

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
             L+GERGRE+REF+  +       ++V+V +TSD S + R  A  TA  IAE F + G 
Sbjct: 210 FGLIGERGRELREFLDHELDEQLRSRTVLVCSTSDRSSMERARAAFTATAIAEAFRAAGK 269

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLLI+DS+TRFA + REI    GE     G P SV++ LPRL+ER G  +  +G ITA+
Sbjct: 270 QVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAG--QTRQGAITAL 327

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D L S+SR        D  
Sbjct: 328 YSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAIDVLMSLSRTMSNVVERDHT 387

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +  +++  L+  +++   +  +G Y+PG D   D AV     I  FL+Q+  +      F
Sbjct: 388 RHANAVRRLMAAYKQVEMLIRLGEYQPGHDAFTDAAVSANDDINRFLQQAMREPQG---F 444

Query: 431 QEITKKLQ 438
             I  +L+
Sbjct: 445 DHIQSQLE 452


>gi|156530213|gb|ABU75203.1| AtpB [Simarouba tulae]
          Length = 471

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|34539407|gb|AAQ74587.1| F1-ATPase alpha subunit [Philydrella pygmaea]
          Length = 394

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 91/402 (22%), Positives = 164/402 (40%), Gaps = 23/402 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQLNSRGASSSDTLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILEEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
             + ++ E   +     +   +D      +++   + +  KQ
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQ 394


>gi|156144836|gb|ABU52979.1| ATP synthase subunit 1 [Nepenthes sp. 'Kosobe']
          Length = 386

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 92/394 (23%), Positives = 163/394 (41%), Gaps = 23/394 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G    +  + V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
            K++  S    + ++ E   +  +  +   +D  
Sbjct: 356 MKQVRGSSKLELAQYRE---VAALAQFGSDLDAA 386


>gi|34539187|gb|AAQ74477.1| F1-ATPase alpha subunit [Anthericum sp. Weigend & Weigend 2000/154]
          Length = 393

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 23/401 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  ++G++ +
Sbjct: 57  VDVPAGKATIGRVVDALGVPIDGKGSLSDHE-RRRVEVKAPGIIERKSVHEPMQSGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGASSSETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N    +++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILPEANALDYTILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  SL  
Sbjct: 296 DVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            + ++ E   +     +   +D      +++   + +  KQ
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQ 393


>gi|304320615|ref|YP_003854258.1| ATP synthase subunit B [Parvularcula bermudensis HTCC2503]
 gi|303299517|gb|ADM09116.1| ATP synthase subunit B [Parvularcula bermudensis HTCC2503]
          Length = 474

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 194/421 (46%), Gaps = 23/421 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V    Q   + + +      S  + +V   +    V    +   E + 
Sbjct: 4   GRISQVIGAVVDVEFDDQLPAIMNALHTDNNGSRLVLEVAQHLGQKTVRAIAMDSTEGLV 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G LV   G    +       GR++N +G+PID    + + + +  I    PP + +   
Sbjct: 64  RGHLVTDTGEPIMVPVGEATLGRIMNVIGEPIDEAGPI-EAEGTRAIHQAAPPFVEQSTE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 AEVLVTGIKVVDLLCPYPRGGKIGLFGGAGVGKTVLIQELINNIAKVHGGYSVFAGVGER 182

Query: 199 GREVREFIEDYLGDNL------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            RE  +   + +  N+             K+ +V    +E P  R    LT +T+AE+F 
Sbjct: 183 TREGNDLYWEMIESNVNVDPQKNGSAAGSKASLVYGQMNEPPGARARVALTGLTVAEHFR 242

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+
Sbjct: 243 DQGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGS 300

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT++ +V V  D+  DP   +  + LD    LNRS+AE+G YP VDPL S SR+ D    
Sbjct: 301 ITSIQAVYVPADDLTDPAPATSFAHLDATTTLNRSIAEKGIYPAVDPLDSTSRILDPRIV 360

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +  ++   + +++ R++  +DI  I G     +      V +   +  FL Q P D++
Sbjct: 361 GEEHYEVARGVQNILQRYKSLQDIIAILGMDELSEED-KLTVARARKVERFLSQ-PFDVA 418

Query: 426 S 426
            
Sbjct: 419 E 419


>gi|156530137|gb|ABU75165.1| AtpB [Hannoa undulata]
          Length = 470

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|6561627|gb|AAF16971.1|AF197639_1 ATPase alpha subunit [Nymphaea sp. Qiu 91029]
          Length = 406

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 167/407 (41%), Gaps = 25/407 (6%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200
              P+  GQR  +      GK+ +      +                   +   +G++  
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSKSKGISESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G++TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 LELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 399


>gi|34539231|gb|AAQ74499.1| F1-ATPase alpha subunit [Calathea loeseneri]
          Length = 414

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 165/408 (40%), Gaps = 19/408 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQFGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 58  KRTGSIVDVPAGKAILGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVREPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------KVIISLVGERG 199
           TG++ +D   P+  GQR  +      GK+ +      +             +   +G++ 
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRAETLYCVYVAIGQKR 176

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + E F     + L+I D 
Sbjct: 177 STVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEDFRDNSMHALIIYDD 236

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 237 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 296

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S 
Sbjct: 297 AGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSS 356

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 357 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 401


>gi|53717869|ref|YP_106855.1| flagellum-specific ATP synthase [Burkholderia pseudomallei K96243]
 gi|53724862|ref|YP_104750.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           23344]
 gi|67641492|ref|ZP_00440269.1| flagellar protein export ATPase FliI [Burkholderia mallei GB8 horse
           4]
 gi|121599361|ref|YP_994237.1| flagellum-specific ATP synthase FliI [Burkholderia mallei SAVP1]
 gi|124385098|ref|YP_001028109.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10229]
 gi|126438671|ref|YP_001057272.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           668]
 gi|126449561|ref|YP_001082919.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10247]
 gi|126453967|ref|YP_001064514.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106a]
 gi|134283677|ref|ZP_01770376.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
 gi|167004334|ref|ZP_02270094.1| flagellum-specific ATP synthase FliI [Burkholderia mallei PRL-20]
 gi|167736641|ref|ZP_02409415.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 14]
 gi|167822254|ref|ZP_02453725.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 9]
 gi|167843849|ref|ZP_02469357.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           B7210]
 gi|167900844|ref|ZP_02488049.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           NCTC 13177]
 gi|167917102|ref|ZP_02504193.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           BCC215]
 gi|217425054|ref|ZP_03456550.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           576]
 gi|226199777|ref|ZP_03795328.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pakistan 9]
 gi|237810409|ref|YP_002894860.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           MSHR346]
 gi|242314340|ref|ZP_04813356.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106b]
 gi|254175108|ref|ZP_04881769.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           10399]
 gi|254182186|ref|ZP_04888783.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1655]
 gi|254188116|ref|ZP_04894628.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254196347|ref|ZP_04902771.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           S13]
 gi|254201852|ref|ZP_04908216.1| flagellum-specific ATP synthase FliI [Burkholderia mallei FMH]
 gi|254207181|ref|ZP_04913532.1| flagellum-specific ATP synthase FliI [Burkholderia mallei JHU]
 gi|254295771|ref|ZP_04963228.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           406e]
 gi|52208283|emb|CAH34215.1| flagellum-specific ATP synthase [Burkholderia pseudomallei K96243]
 gi|52428285|gb|AAU48878.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           23344]
 gi|121228171|gb|ABM50689.1| flagellum-specific ATP synthase FliI [Burkholderia mallei SAVP1]
 gi|124293118|gb|ABN02387.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10229]
 gi|126218164|gb|ABN81670.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           668]
 gi|126227609|gb|ABN91149.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106a]
 gi|126242431|gb|ABO05524.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC
           10247]
 gi|134245086|gb|EBA45181.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei
           305]
 gi|147747746|gb|EDK54822.1| flagellum-specific ATP synthase FliI [Burkholderia mallei FMH]
 gi|147752723|gb|EDK59789.1| flagellum-specific ATP synthase FliI [Burkholderia mallei JHU]
 gi|157806304|gb|EDO83474.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           406e]
 gi|157935796|gb|EDO91466.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160696153|gb|EDP86123.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC
           10399]
 gi|169653090|gb|EDS85783.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           S13]
 gi|184212724|gb|EDU09767.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1655]
 gi|217392074|gb|EEC32100.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           576]
 gi|225928128|gb|EEH24164.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           Pakistan 9]
 gi|237505470|gb|ACQ97788.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           MSHR346]
 gi|238522435|gb|EEP85879.1| flagellar protein export ATPase FliI [Burkholderia mallei GB8 horse
           4]
 gi|242137579|gb|EES23981.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1106b]
 gi|243060334|gb|EES42520.1| flagellum-specific ATP synthase FliI [Burkholderia mallei PRL-20]
          Length = 523

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 149/432 (34%), Positives = 223/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+    + +++ P  
Sbjct: 89  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSALPYAQAEVVGFAGERLFLMPTT 146

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 147 AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDNLGPL-ASKVDA 205

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 206 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 265

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 266 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 325

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 326 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 385

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGH+VL+RSLAE G YP +D  AS+SR      
Sbjct: 386 SITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDIEASISRAMTALI 445

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 446 DDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 505

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 506 PYAPSLAALDAL 517


>gi|164685684|gb|ABY66788.1| atp1 [Griselinia racemosa]
          Length = 401

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 161/391 (41%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  +   +D      +++   + +  KQ  
Sbjct: 361 ALAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|34539207|gb|AAQ74487.1| F1-ATPase alpha subunit [Austrobaileya scandens]
          Length = 416

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 166/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTKESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|167813739|ref|ZP_02445419.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 91]
          Length = 464

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 149/432 (34%), Positives = 223/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+    + +++ P  
Sbjct: 30  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSALPYAQAEVVGFAGERLFLMPTT 87

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 88  AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDNLGPL-ASKVDA 146

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 147 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 206

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 207 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 266

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 267 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 326

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGH+VL+RSLAE G YP +D  AS+SR      
Sbjct: 327 SITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDIEASISRAMTALI 386

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 387 DDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 446

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 447 PYAPSLAALDAL 458


>gi|3273596|gb|AAC24780.1| F1-ATPase alpha subunit [Alstroemeria caryophyllaea]
          Length = 421

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLV 195
           TG++ +D    +  G+R  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSXVXIGRGRRELIIGDRQTGKTAIAIDTILNQKQIHSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L  MAP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLXFMAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|76808788|ref|YP_331828.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710b]
 gi|167892349|ref|ZP_02479751.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           7894]
 gi|167909062|ref|ZP_02496153.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           112]
 gi|254260525|ref|ZP_04951579.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710a]
 gi|76578241|gb|ABA47716.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710b]
 gi|254219214|gb|EET08598.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           1710a]
          Length = 526

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 149/432 (34%), Positives = 223/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+    + +++ P  
Sbjct: 92  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSALPYAQAEVVGFAGERLFLMPTT 149

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 150 AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDNLGPL-ASKVDA 208

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 209 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 268

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 269 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 328

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 329 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 388

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGH+VL+RSLAE G YP +D  AS+SR      
Sbjct: 389 SITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDIEASISRAMTALI 448

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 449 DDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 508

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 509 PYAPSLAALDAL 520


>gi|42560420|gb|AAS20380.1| HrcN [Pectobacterium atrosepticum]
          Length = 455

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 236/422 (55%), Gaps = 13/422 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V + G + +++ +     C      +GD   V +  +S  + +++  + D  ++  +G  
Sbjct: 28  VEKKGRVMAVSGILL--ECSLPQARIGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGAL 85

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI-DGDDS--LGKGDLS---MEIMSK 131
           + I+ G  V       RI  S    G V++  G+ + DG +S  +  G ++     ++  
Sbjct: 86  DGIAQGATVTPLYQPHRIQVSERLLGSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLGD 145

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP  +R R+ +   TG+R +D    +  GQR+G+FAG+G GK+TLL+  AR+   D ++
Sbjct: 146 APPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDTIV 205

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
             L+GERGRE+REF+  +   +   ++V+V +TSD S + R  A  TA  IAE + ++G 
Sbjct: 206 FGLIGERGRELREFLDHELDDELRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGR 265

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLLILDS+TRFA + REI    GE     G P SV++ LPRL+ER G +E   G ITA+
Sbjct: 266 QVLLILDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQTED--GAITAL 323

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVL++ D+ NDP+AD VRS++DGHIVL R LAE+G YP +D LAS+SR        D  
Sbjct: 324 YSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHT 383

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +    +  L+  +++   +  +G Y+PG D + D AV+    I  FL+QS  +     V 
Sbjct: 384 RNAGGVRRLMAAYKQVEMLIRLGEYQPGHDELTDSAVNAHSEITQFLRQSMREPMPYGVI 443

Query: 431 QE 432
           Q+
Sbjct: 444 QQ 445


>gi|257439243|ref|ZP_05614998.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
 gi|257198285|gb|EEU96569.1| ATP synthase F1, alpha subunit [Faecalibacterium prausnitzii
           A2-165]
          Length = 584

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 116/433 (26%), Positives = 185/433 (42%), Gaps = 15/433 (3%)

Query: 2   QKNLETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +L TL    EDY       +GG + S       V  + + V  G+ V  +       G
Sbjct: 85  KPSLATLKTRIEDYKPAQTSAEGGVVISSADGIVQVEGMDKAV-YGEIVTFENGAK---G 140

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            V  ++   + I      E + +G LV   G R  I     + GRVI+ LG+PIDG   +
Sbjct: 141 MVESVDPGKLGIMLFDGAETVGVGTLVTRSGKRAGIPVGDGFLGRVIDPLGEPIDGKGPV 200

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
                +  I  + P  + RQ V+    TGI  ID   P+  GQR  +      GK+    
Sbjct: 201 NAEGYN-PIEKQAPGILERQSVDTPLHTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAT 259

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   +    ED         + +V AT+ +S  L+ +AP 
Sbjct: 260 DAILNQKDTGVLCIYVAIGQKASSIARVAEDLKKHGAMSYTTIVAATASDSAPLQYIAPY 319

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF SKG +VL++ D +++ A + R I+      P    YP  VF    RLLER
Sbjct: 320 AGTALAEYFMSKGKSVLIVYDDLSKHAVAYRAISLLLRRSPGREAYPGDVFYLHSRLLER 379

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  V     + +  I  +V SI DG I L  +L   G  P V+  
Sbjct: 380 SCRMRDDLGGGSITALPIVETQAGDVSAYIPTNVISITDGQIFLESALFNAGNRPAVNVG 439

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK  S+L   + +++   D+     +   +D    + +     + 
Sbjct: 440 LSVSRVGGAAQTKAMKKANSNLRIELAQYK---DMESFAQFSSDLDAETRRQLEHGKALT 496

Query: 415 DFLKQSPSDLSSE 427
           + LKQ      S+
Sbjct: 497 EMLKQPLYQPKSD 509


>gi|225569926|ref|ZP_03778951.1| hypothetical protein CLOHYLEM_06021 [Clostridium hylemonae DSM
           15053]
 gi|225161396|gb|EEG74015.1| hypothetical protein CLOHYLEM_06021 [Clostridium hylemonae DSM
           15053]
          Length = 474

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 16/422 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVG 76
           ++  G I  +      V   S+     + D +        ++ +V +   +       + 
Sbjct: 10  IMVKGRIVQVMGPVVDVEFDSREDLPFIKDALEVDNNGRRSVMEVAQHTGNNTARCIMLA 69

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G   ++       GR+ N LG+ IDG +++  G    EI  K P  
Sbjct: 70  SSDGLYRGMEVTATGAGIKVPVGEQTLGRLFNVLGETIDGKEAIDSGSRRWEIHRKAPGF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             +    +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+     +   +    S+ 
Sbjct: 130 EEQSPAVEVLETGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIF 189

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250
             VGER RE  +   +     +  K+ +V    +E P  R     T +T+AEYF   +  
Sbjct: 190 TGVGERSREGNDLWTEMGESGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQ 249

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL +D+I RF  +  E++   G +P A GY  ++  E+  L ERI     + G++T+V
Sbjct: 250 NVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLAQEMGALQERIA--STKNGSVTSV 307

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  S LD   VL+R + E+G YP VDPL S SR+ +      + 
Sbjct: 308 QAVYVPADDLTDPAPATTFSHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEH 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++   +  ++ +++E +DI  I G     +    + V +   I  FL Q     S  + 
Sbjct: 368 YRVARKVQEILQKYKELQDIIAILGMEELSEED-KRTVSRARKIQKFLSQP---FSVAET 423

Query: 430 FQ 431
           F 
Sbjct: 424 FT 425


>gi|26992090|ref|NP_747515.1| F0F1 ATP synthase subunit alpha [Pseudomonas putida KT2440]
 gi|81439304|sp|Q88BX2|ATPA_PSEPK RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|24987232|gb|AAN70979.1|AE016742_8 ATP synthase F1, alpha subunit [Pseudomonas putida KT2440]
          Length = 514

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 185/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDNLDVSSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGS-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVILGAYDTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG       +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTQTDA-VEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++  + D     +   VG++   V   +           ++VVVA++ ES  L+ 
Sbjct: 178 AMAIDAIINQKDSGIFCVYVAVGQKRSTVANIVRKLEETGALANTIVVVASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|254000516|ref|YP_003052579.1| F0F1 ATP synthase subunit beta [Methylovorus sp. SIP3-4]
 gi|313202475|ref|YP_004041133.1| ATP synthase f1 subunit beta [Methylovorus sp. MP688]
 gi|253987195|gb|ACT52052.1| ATP synthase F1, beta subunit [Methylovorus sp. SIP3-4]
 gi|312441791|gb|ADQ85897.1| ATP synthase F1, beta subunit [Methylovorus sp. MP688]
          Length = 465

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 189/411 (45%), Gaps = 15/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG----QVIR-INLDIVYICPV 75
            QG  +  I +V        Q   + + +V   +NS        +V + +   +V    +
Sbjct: 2   SQGKVVQCIGAVVDVEFPRDQMPKVYEALVLDEENSTAEAGLTLEVQQQLGDGVVRTIAM 61

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +S G  V   G + ++       GR+++ LG+PID    + + D    I  K P 
Sbjct: 62  GSSDGLSRGMKVKSTGNQIQVPVGHGTLGRIMDVLGRPIDEAGPI-ECDERRSIHQKAPS 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                      +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 121 FEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHAGLSV 180

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 181 FAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDEGR 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++
Sbjct: 241 DILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     +E 
Sbjct: 299 QAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPLIVGEEH 358

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   + R++E RDI  I G           AV +   I  FL Q 
Sbjct: 359 YNVARAVQSTLQRYKELRDIIAILGMDELS-PEDKLAVARARKIQRFLSQP 408


>gi|188580722|ref|YP_001924167.1| F0F1 ATP synthase subunit beta [Methylobacterium populi BJ001]
 gi|179344220|gb|ACB79632.1| ATP synthase F1, beta subunit [Methylobacterium populi BJ001]
          Length = 484

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 114/433 (26%), Positives = 192/433 (44%), Gaps = 26/433 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +  + + +  + +V  ++  + V    +   E + 
Sbjct: 15  GRITQVIGPVVDVQFDGYLPEILNALETKNQGNRLVLEVAQQLGENTVRCIAMDTSEGLV 74

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   R+       GR++N +G+PID    + + D    I    P    +   
Sbjct: 75  RGQEVSDTGAPIRVPVGHNTLGRIMNVIGEPIDEAGPI-EADTYRAIHQPAPSYDEQSTE 133

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 134 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAGVGER 193

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +  N+              K  +V    +ESP  R    LT +TIAE F
Sbjct: 194 TREGNDLYHEMIESNVNKNPKENNGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEQF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 254 RDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKG 311

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+   A 
Sbjct: 312 SITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAI 371

Query: 366 -SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +   +   +   + R++  +DI  I G     +      V +   I  FL Q     
Sbjct: 372 LGEEHYDVARRVQQTLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQP---F 427

Query: 425 SSEDVFQEITKKL 437
              +VF     KL
Sbjct: 428 HVAEVFTGSPGKL 440


>gi|332533716|ref|ZP_08409575.1| ATP synthase alpha chain [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036880|gb|EGI73341.1| ATP synthase alpha chain [Pseudoalteromonas haloplanktis ANT/505]
          Length = 513

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 105/443 (23%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I S+T     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEKFEVVSEARNEGTIVSVTDGIIRIHGLAD-CMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D +    +G   +++ G  V+  GR   +       GRV+N LG PID
Sbjct: 59  --RYAIALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGPGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   D    +    P  + R+ V++  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGALD-NDGFEPVEKIAPGVIERKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDTGVKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPFAGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|146329438|ref|YP_001210026.1| F0F1 ATP synthase subunit beta [Dichelobacter nodosus VCS1703A]
 gi|166201700|sp|A5EXL4|ATPB_DICNV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146232908|gb|ABQ13886.1| ATP synthase F1, beta subunit [Dichelobacter nodosus VCS1703A]
          Length = 463

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 117/409 (28%), Positives = 195/409 (47%), Gaps = 16/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIG 78
           +  G I  I      +   +  +  + D +V Q  N     +V ++  D +V    +G  
Sbjct: 1   MSTGKIVQIIGAVVDIEFPAAEMPNINDALVSQEANVTF--EVQQLLGDGVVRTIAMGSS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G ++ + G   ++       GR++N LG+P+D   ++   D    I    P    
Sbjct: 59  DGLRRGMVIENTGDAIKVPVGKATLGRIMNVLGEPVDHGGAINAED-KWSIHRAAPAYDE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 118 LSNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAG 177

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    D L K  +V    +E    R    LT +T+AEYF  +G +VL
Sbjct: 178 VGERTREGNDFYYEMKESDVLDKVSLVYGQMNEPAGNRFRVALTGLTMAEYFREEGRDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI     +KG+IT++ +V
Sbjct: 238 FFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERIA--STKKGSITSIQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-L 372
            V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D     +E    
Sbjct: 296 YVPADDLTDPSPATTFAHLDSTVVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGEEHYST 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
              +  ++ R++E RDI  I G     +   DKA V +   +  FL Q 
Sbjct: 356 ARRVQGVLQRYKELRDIIAILGMDELSED--DKAVVTRARKVQRFLSQP 402


>gi|171191279|gb|ACB45107.1| AtpB [Simaba suffruticosa]
          Length = 476

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|27461579|gb|AAM95206.1| ATPase F1 alpha subunit [Ecdeiocolea monostachya]
          Length = 418

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 96/414 (23%), Positives = 161/414 (38%), Gaps = 23/414 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L+  +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVFGLN-LIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV+ ALG PIDG  +L           K P    R  V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVXALGVPIDGKGALXXX-XXXXXXVKAPGXXERXSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG+  +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLXAVDSLVPIGRGQREXIIGDRQTGKTAIAXDTXLNQKQMNSXGTNESETLYCVYGAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G +   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GHKRSTVAQLVQILAEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IXDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             S    + ++ E         +   +D      +++   + + LKQ   +  S
Sbjct: 357 CGSSKLELAQYREX---AAFAQFGSDLDAATQALLNRGARLTEVLKQPQYNPLS 407


>gi|94314183|ref|YP_587392.1| flagellum-specific ATP synthase [Cupriavidus metallidurans CH34]
 gi|93358035|gb|ABF12123.1| flagellum-specific ATP synthase [Cupriavidus metallidurans CH34]
          Length = 486

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 159/434 (36%), Positives = 225/434 (51%), Gaps = 26/434 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ------GKNSDNLGQVIRINLDIVYICP 74
              G ++    +      L   V     +         G       +V+    D +Y+ P
Sbjct: 39  RTCGRLTRAAGLVLEAVGLRLPVGSDCLIELPTGQHSHGGPRTAEAEVVGFGADRLYLMP 98

Query: 75  VGIGEEISLGDLVFHW------------------GRFRISPSACWCGRVINALGKPIDGD 116
                 +  G  V+                    G  R+       GRV++A G+P+DG 
Sbjct: 99  QSDVAGLVPGARVYPLEPSPLPNGIIGAGAPREQGSKRLPVGDGLLGRVLDAAGRPLDGL 158

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +      + +       + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS 
Sbjct: 159 GPITAAS-EVPLAGTQINPLTRAPIETVLDTGVRAINGMLTVGRGQRMGLFAGSGVGKSV 217

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAP 235
           LL M AR    D +++ L+GERGREV+EFIE+ LG+   K+SVVV A +D SP+LR    
Sbjct: 218 LLGMMARYTNADVIVVGLIGERGREVKEFIENILGEEGRKRSVVVAAPADTSPLLRMQGA 277

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A  +AEYF  KG +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+E
Sbjct: 278 AYATRLAEYFRDKGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPTLVE 337

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  A
Sbjct: 338 RTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDVEA 397

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR       A +   V     L+ R++  RD+  +G Y PG D  LD A+   P +  
Sbjct: 398 SISRAMTALIDAPQFASVRRFKQLMSRYQRNRDLISVGAYVPGSDPELDLAIRMYPRMEA 457

Query: 416 FLKQSPSDLSSEDV 429
           FL+Q   + +  D 
Sbjct: 458 FLQQDIHERAGYDA 471


>gi|317125557|ref|YP_004099669.1| ATP synthase F1 subunit alpha [Intrasporangium calvum DSM 43043]
 gi|315589645|gb|ADU48942.1| ATP synthase F1 subcomplex alpha subunit [Intrasporangium calvum
           DSM 43043]
          Length = 543

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 92/439 (20%), Positives = 171/439 (38%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           E L    + Y      +   G ++        V  L       + ++ +       G  +
Sbjct: 13  EALDSFVQSYEPGAASREEVGRVTDAGDGIAHVEGL-PSAMTNELLLFEDG---TRGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    +     + GRVI+ LG PIDG   + K 
Sbjct: 69  NLDVHNIGVVILGDFSGIEEGQTVKRTGEVLSVPVGDDFLGRVIDPLGNPIDGLGEI-KA 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  + R+ V +  +TGI+ ID  TP+  GQR  +      GK+T+     
Sbjct: 128 EQRRALELQAPTVVQRKSVHEPLQTGIKSIDAMTPIGRGQRQLIIGDRQTGKTTVAIDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          D   + I   +G++G  +             + + +V A + ++   +
Sbjct: 188 INQKRNWESGDPDQQVRCIYVGIGQKGSTIASVRGTLEEAGALEYTTIVAAPASDAAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +     + +  I  +V SI DG I L   L      P
Sbjct: 308 RLLERCAKLSDDLGHGSMTGLPIIETKAGDVSAYIPTNVISITDGQIYLQADLFNANVRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     K +   L   + +F   R +     +   +D      + +
Sbjct: 368 AIDVGVSVSRVGGAAQIKAMKSVAGRLKLDLAQF---RAMEAFAMFASDLDPASRAQLAR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ  S     +
Sbjct: 425 GARLVELLKQPQSSPYPVE 443


>gi|75332718|sp|Q95DR6|ATPB_AGAAF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943654|emb|CAD10751.1| ATP synthase, beta subunit [Agapanthus africanus]
          Length = 498

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G      RE      +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVSERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20146624|gb|AAM12466.1| ATP synthase alpha subunit [Symplocos sp. Chung and Anderberg 1351]
          Length = 393

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 90/401 (22%), Positives = 163/401 (40%), Gaps = 23/401 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  D V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENDNVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLL+R      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLKRAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S    + ++ E      +  +   +D      +++   + +
Sbjct: 356 SSKLELAQYREG---AALAQFGSDLDAATQALLNRGARLTE 393


>gi|260814835|ref|XP_002602119.1| hypothetical protein BRAFLDRAFT_125760 [Branchiostoma floridae]
 gi|229287425|gb|EEN58131.1| hypothetical protein BRAFLDRAFT_125760 [Branchiostoma floridae]
          Length = 1164

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 112/417 (26%), Positives = 187/417 (44%), Gaps = 21/417 (5%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLG-QVIRINLDI-VYICPVGI 77
           V  GYIS I      V     Q   + + +  +G +++ +  +V ++  D  V    +  
Sbjct: 29  VNIGYISQIIGPVVDVEFTEGQLPNIYNKLEVEGPDNNPIALEVQQLLGDNRVRAVAMAS 88

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            +++  G      G    +       GR++N LG+P+D    +   + ++ I    P   
Sbjct: 89  TDDLKRGIKCIDTGAPISVPVGQETLGRIMNVLGEPVDNQGEIN-AEQTLPIHRNAPAFK 147

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           + +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 148 DLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFA 207

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +  E+               K  +V    +E P  R    LT +T+AEYF
Sbjct: 208 GVGERTREGNDLYEEMKESGVINEKSLTDSKVALVYGQMNEPPGARMRVGLTGLTMAEYF 267

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    
Sbjct: 268 RDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTTN 325

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 326 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPG 385

Query: 365 WSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +E       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 386 IVGEEHYGTAQRVKSTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 441


>gi|82701444|ref|YP_411010.1| F0F1 ATP synthase subunit beta [Nitrosospira multiformis ATCC
           25196]
 gi|118573707|sp|Q2YCA3|ATPB1_NITMU RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|82409509|gb|ABB73618.1| ATP synthase F1, beta subunit [Nitrosospira multiformis ATCC 25196]
          Length = 459

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 119/405 (29%), Positives = 192/405 (47%), Gaps = 11/405 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           QG  +  I +V        +   + D +V +G       Q  ++   +V    +G  E +
Sbjct: 3   QGKIVQCIGAVVDVEFAREEMPKVYDALVLEGSELTLEVQ-QQLGDGVVRTIALGSSEGL 61

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G +V + G + R+       GR+++ LG PID    +G  + +  I  K P       
Sbjct: 62  RRGMMVTNTGDQIRVPVGTKTLGRIMDVLGTPIDEMGPIG-AEQNRSIHQKAPAFDELSA 120

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGE
Sbjct: 121 STELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 180

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VLL +
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLLFV 240

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++ +V V 
Sbjct: 241 DNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKSGSITSIQAVYVP 298

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSS 375
            D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     +E      +
Sbjct: 299 ADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYSTARA 358

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + R++E RDI  I G           AV +   I  FL Q 
Sbjct: 359 VQQTLQRYKELRDIIAILGMDELS-PEDKLAVARARKIQRFLSQP 402


>gi|50121011|ref|YP_050178.1| type III secretion system protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611537|emb|CAG74985.1| type III secretion protein [Pectobacterium atrosepticum SCRI1043]
          Length = 456

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 236/422 (55%), Gaps = 13/422 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V + G + +++ +     C      +GD   V +  +S  + +++  + D  ++  +G  
Sbjct: 29  VEKKGRVMAVSGILL--ECSLPQARIGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGAL 86

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI-DGDDS--LGKGDLS---MEIMSK 131
           + I+ G  V       RI  S    G V++  G+ + DG +S  +  G ++     ++  
Sbjct: 87  DGIAQGATVTPLYQPHRIQVSERLLGSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLGD 146

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP  +R R+ +   TG+R +D    +  GQR+G+FAG+G GK+TLL+  AR+   D ++
Sbjct: 147 APPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDTIV 206

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
             L+GERGRE+REF+  +   +   ++V+V +TSD S + R  A  TA  IAE + ++G 
Sbjct: 207 FGLIGERGRELREFLDHELDDELRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGR 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLLILDS+TRFA + REI    GE     G P SV++ LPRL+ER G +E   G ITA+
Sbjct: 267 QVLLILDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQTED--GAITAL 324

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVL++ D+ NDP+AD VRS++DGHIVL R LAE+G YP +D LAS+SR        D  
Sbjct: 325 YSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHT 384

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +    +  L+  +++   +  +G Y+PG D + D AV+    I  FL+QS  +     V 
Sbjct: 385 RNAGGVRRLMAAYKQVEMLIRLGEYQPGHDELTDSAVNAHSEITQFLRQSMREPMPYGVI 444

Query: 431 QE 432
           Q+
Sbjct: 445 QQ 446


>gi|291520260|emb|CBK75481.1| ATP synthase F1 subcomplex beta subunit [Butyrivibrio fibrisolvens
           16/4]
          Length = 464

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 118/409 (28%), Positives = 188/409 (45%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G ++ I      V     +   + D +     N + L  V+     +  D V    +G  
Sbjct: 6   GKVTQIIGAVLDVKFAEGELPEINDALEITRDNGERL--VVEVAQHLGDDTVRCIAMGPT 63

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+ ID   +   G   M I  K P    
Sbjct: 64  DGLVRGMDVVATGAPISVPVGEATLGRIFNVLGEAIDEQPA-PTGVEKMPIHRKAPAFEE 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   
Sbjct: 123 QATSTEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTG 182

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG  +V
Sbjct: 183 VGERTREGNDLYYEMKESGVIDKTCMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDV 242

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 243 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 300

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL RS+AE G YP VDPL S SR+ D      E   
Sbjct: 301 VYVPADDLTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHFT 360

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 VARGVQEILQKYKELQDIIAILGMDELSEED-KLVVNRARKIQRFLSQP 408


>gi|155029335|dbj|BAF75551.1| ATP synthase beta subunit [Cocconerion minus]
          Length = 489

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATYPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 IFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|221135163|ref|ZP_03561466.1| F0F1 ATP synthase subunit alpha [Glaciecola sp. HTCC2999]
          Length = 513

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 100/448 (22%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +   +   V       G I  +T     +T L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKKRIEKFEVVSEARNEGTIVGVTDGIIRITGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G  +++  G+ V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYQDLQEGNKVQSTGRILEVPVGPGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++        +    P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGAIEAAGFE-PVEKIAPGVIERQSVDQPVQTGYKSVDSMIPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + +   K +   +G++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQKNTGIKCVYVAIGQKASTIANVVRKLEEHGALANTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +  T+ EYF  +G++ L++ D +++ A + R+++      P    YP  VF    
Sbjct: 236 YLSAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAVNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +       + +KQ+     S
Sbjct: 413 LDDATRAQLEHGERATELMKQNQYAPLS 440


>gi|189017740|gb|ACD71539.1| F1-ATPase alpha subunit [Tacca chantieri]
          Length = 400

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 159/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQIHSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|156976205|ref|YP_001447111.1| flagellum-specific ATP synthase [Vibrio harveyi ATCC BAA-1116]
 gi|156527799|gb|ABU72884.1| hypothetical protein VIBHAR_04976 [Vibrio harveyi ATCC BAA-1116]
          Length = 450

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 153/436 (35%), Positives = 242/436 (55%), Gaps = 7/436 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L+  LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSDALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             +  + Y+ P+     +  G  V    G   +  S+ W GRV+N LG+P D    L  G
Sbjct: 70  GFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGAPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 D-RVSLEPKPINPLKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREF+  +   +  KK+++V A +DESP++R  A L    +
Sbjct: 189 QNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 249 AEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +         + ++   L   + + +++  +GGY+PG D  LD++V   P +  +L+QS 
Sbjct: 369 NACTHEAHSTIANNFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRAYLQQSA 428

Query: 422 SDLSSEDVFQEITKKL 437
           ++            ++
Sbjct: 429 NEAVDYPTSLTALAQM 444


>gi|91223214|ref|ZP_01258480.1| putative flagellum-specific ATP synthase [Vibrio alginolyticus
           12G01]
 gi|91192027|gb|EAS78290.1| putative flagellum-specific ATP synthase [Vibrio alginolyticus
           12G01]
          Length = 448

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 153/438 (34%), Positives = 247/438 (56%), Gaps = 8/438 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L++ LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSEALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                I Y+ P+     +  G  V    G   +  S+ W GRV+N LG+P+D    L  G
Sbjct: 70  GFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVLNGLGEPLDDGAPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 D-RVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREFI  +   +  KK++++ A +DESP++R  A L    +
Sbjct: 189 KNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           +EYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 249 SEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NQHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +         + ++   +   + + +++  +GGY+PG D  LD++V   P +  +L+Q+ 
Sbjct: 369 NTCTQDAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAYLQQAA 428

Query: 422 SD-LSSEDVFQEITKKLQ 438
           ++ +       E+ +  Q
Sbjct: 429 NESVDYPTSLTELAQLFQ 446


>gi|148272347|ref|YP_001221908.1| F0F1 ATP synthase subunit alpha [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166201660|sp|A5CQ58|ATPA_CLAM3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|147830277|emb|CAN01211.1| ATP synthase alpha chain [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 545

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 94/432 (21%), Positives = 167/432 (38%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y   K    + GY+         V  L   V   + +         LG   
Sbjct: 13  DALKDFVQSYEPGKASTTEVGYVLDAGDGIAHVQGL-PGVMANELITFADG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEESEIGVIVLGEFAGIEEGMEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGQGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMQRKSVHEPMQTGIKAIDAMIPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +               + +V + + +    +
Sbjct: 188 INQKANWESGDTNKQVRCIYVAIGQKGSTIASVKGALEEAGAMEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGDAQVKSIKKVSGTLKLELAQYRSLE---AFAIFASDLDAASRRQLAR 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GARLTELLKQPQ 436


>gi|18266885|sp|P50000|ATPA_ACEWO RecName: Full=ATP synthase subunit alpha, sodium ion specific;
           AltName: Full=Na(+)-translocating ATPase subunit alpha
 gi|6014711|gb|AAA79906.2| F1FO ATPase alpha subunit [Acetobacterium woodii DSM 1030]
          Length = 501

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 103/433 (23%), Positives = 170/433 (39%), Gaps = 18/433 (4%)

Query: 1   MQKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    E ++Q+ ++       K  VV  G +  +      V  L +    G+ +      
Sbjct: 1   MNLRPEEISQIIKNEIDRYEDKLEVVDVGTVIQVGDGVARVHGL-ENAMAGELLAFPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G V+ +  D V    +G  ++I  GD+V   GR  +   +    GRV+NALG P+D
Sbjct: 58  -EVYGMVLNLEEDNVGCVLLGYDDDIVEGDIVRCTGRILKFQLANHVFGRVVNALGFPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +  K    + R+ V +  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGPIV-TDHRRPVEVKAAGVIERESVNQPIQTGYKAIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L      +        I   +G++   V + +     +N    +++V A + +   L 
Sbjct: 176 TALGFDTIINQKGEDVICIYVAIGQKDSTVAQIVGQLEENNAMDYTIIVSAGAAQLAPLH 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP + VT+AEYF       + +          +  +  +    P    YP  VF    
Sbjct: 236 NIAPYSGVTMAEYFMKGPTKRITVHQGRPSKHGCLPSLVFDPRRPPGREPYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER     K  G+ITA+  +     + +  I  +V SI  G I L   L   G  P V
Sbjct: 296 RLLERAAKL-KAGGSITALPIIETQAGDVSAYIPTNVISITGGQIFLEAELFRSGIRPAV 354

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +P  SVSR+   A     KK+   L     ++ E         +   +D      + +  
Sbjct: 355 NPGISVSRVGGSAQIKSMKKVAGPLRIEYAQYREL---ASFAQFGSDLDDETKAQLAKGE 411

Query: 412 IIYDFLKQSPSDL 424
            I + LKQ   D 
Sbjct: 412 RIVEILKQDQYDP 424


>gi|329298596|ref|ZP_08255932.1| flagellum-specific ATP synthase [Plautia stali symbiont]
          Length = 451

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 230/421 (54%), Gaps = 15/421 (3%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDIVYICP 74
            V + G ++  T +    T L   + LG   + +    G  ++   +V+  N   +++ P
Sbjct: 24  TVRRYGRLTRATGLVLEATGL--QLPLGATCIIERHDNGTITEVESEVVDFNGQKLFLMP 81

Query: 75  VGIGEEISLGDLVF------HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           +   + I     V+      H G+ ++       GRV++  GKP+DG  +   G     +
Sbjct: 82  LEEVDGILPDARVYARVHGDHSGK-QLLLGPELLGRVLDGSGKPLDGLPAPETG-YRAPL 139

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
           ++     + R  +     TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    D
Sbjct: 140 ITAPFNPLQRTPIHDVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTKTD 199

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV+EFIE+ LG +   +SVV+ A +D SP+LR      A  IAE F  
Sbjct: 200 VIVVGLIGERGREVKEFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRD 259

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+I
Sbjct: 260 RGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGCGSI 319

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R+ILDGHI L+R LAE G YP +D  AS+SR        
Sbjct: 320 TAFYTVLTEGDDQQDPIADSARAILDGHIALSRRLAEAGHYPAIDIEASISRAMTALIDE 379

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
                V     L+  F+  RD+  +G Y  G D +LD+A+   P +  FL+Q   + S  
Sbjct: 380 THYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDPMLDRAIKLYPQMEAFLQQGIFERSDY 439

Query: 428 D 428
           D
Sbjct: 440 D 440


>gi|34539479|gb|AAQ74623.1| F1-ATPase alpha subunit [Xyris jupicai]
          Length = 408

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 90/403 (22%), Positives = 163/403 (40%), Gaps = 23/403 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGNDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELLIGDRQTGKTAIAIDTILNQKQMFSRGTKESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNLKKS-VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  +  ++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILTEANAMEYGILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G++TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICSGTELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 ELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 395


>gi|56461721|ref|YP_157002.1| F0F1 ATP synthase subunit alpha [Idiomarina loihiensis L2TR]
 gi|81600225|sp|Q5QZI4|ATPA_IDILO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|56180731|gb|AAV83453.1| F0F1-type ATP synthase, alpha subunit [Idiomarina loihiensis L2TR]
          Length = 513

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 102/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +   +   V       G I S+      +  L+  +  G+ V   G  
Sbjct: 1   MQLNSNEIAELIKQRIEKFEVTSEARNEGTIMSVQDGIIRIHGLADCL-QGEMVELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLQEGTKVKSTGRILEVPVGEKLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +    P  + RQ V++  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-EADGYEPVEKIAPGVIERQSVDQPVQTGYKSIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + L      +  D   K +   +G++   +   +         + ++VV A++ ES  L+
Sbjct: 176 TALAVDAIINQKDSGIKCVYVAIGQKNSTISAVVRKLEEHGAMENTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A  +  T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKFTDGKVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGVSVSRVGGSAQTKIIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDESTRSQLEHGQRVTELMKQKQ 435


>gi|89112890|gb|ABD61057.1| ATPase alpha subunit [Philodendron hederaceum var. oxycardium]
          Length = 375

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 158/379 (41%), Gaps = 18/379 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK---------STLLSMFARSDCFDKVIISLVGE 197
           TG++ +D   P+  GQR  +      GK         +      +  +     +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSSSENETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIG 393
           S    + ++ E       G
Sbjct: 356 SSKLELAQYREVAAFAQFG 374


>gi|218135020|ref|ZP_03463824.1| hypothetical protein BACPEC_02925 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990405|gb|EEC56416.1| hypothetical protein BACPEC_02925 [Bacteroides pectinophilus ATCC
           43243]
          Length = 684

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 100/403 (24%), Positives = 174/403 (43%), Gaps = 14/403 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +      +  +  +   G+ VV         G V  +  D + +   G   EI  
Sbjct: 203 GVVNWVGDGIANIDGI-DHAFYGEIVVFDCG---VKGMVQDVRRDEIGVILFGRDTEIKE 258

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G+   I     + GR+INALG+P+DG+  + +      I    P  ++R+ V 
Sbjct: 259 GTRVVRTGKMAGIPVGDAFKGRIINALGEPLDGEGDIEQAGFR-PIECPAPSIVDRKSVS 317

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGR 200
              +TGI  ID   P+  GQR  +      GK+++      +        I   +G++  
Sbjct: 318 VPMETGILSIDSMFPIGRGQRELIIGDRQTGKTSIAMDTIINQKGKDVVCIYVAIGQKAS 377

Query: 201 EVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            + + +      D +  +++V AT+ +   L+ +AP +   +AEYF  +G +VL++ D +
Sbjct: 378 TIAKLVNTLKKNDAMDYTIIVSATASDPAPLQYIAPYSGTALAEYFMYQGKDVLIVYDDL 437

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDG 317
           ++ A + R I+      P    YP  VF    RLLER     +E   G+ITA+  +    
Sbjct: 438 SKHAVAYRAISLLLERSPGREAYPGDVFYLHSRLLERSSRLTAEAGGGSITALPIIETQA 497

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L   L   G+ P V+   SVSR+   A +   KK   S+ 
Sbjct: 498 GDVSAYIPTNVISITDGQIFLESELFFAGQRPAVNVGLSVSRVGGAAQTKAMKKASGSIR 557

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + ++ E     +   +   +D    K +     + + LKQ 
Sbjct: 558 IDLAQYREME---VFTQFSSDLDENTKKQLAHGKALMELLKQP 597


>gi|189017674|gb|ACD71506.1| F1-ATPase alpha subunit [Burmannia congesta]
          Length = 400

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|89112888|gb|ABD61056.1| ATPase alpha subunit [Xanthosoma mafaffa]
          Length = 375

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 161/379 (42%), Gaps = 18/379 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD----KVIISLVGE 197
           TG++ +D   P+  GQR  +      GK      T+L+    +   +      +   +G+
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSSSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIG 393
           S    + ++ E       G
Sbjct: 356 SSKLELAQYREVAAFAQFG 374


>gi|322432993|ref|YP_004210242.1| ATPase, FliI/YscN family [Acidobacterium sp. MP5ACTX9]
 gi|321165220|gb|ADW70924.1| ATPase, FliI/YscN family [Acidobacterium sp. MP5ACTX9]
          Length = 434

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 158/433 (36%), Positives = 241/433 (55%), Gaps = 13/433 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRIN 66
            +QL    S   +   G +  +          S  V  GD   +   +     G+V+   
Sbjct: 9   FSQLERSSS---LRWSGRVLQVIGNLVESEGPSCSV--GDECEIITREGRSFSGEVVGFR 63

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              +    + + + I  GD +   G R  I       GRVI+  G+P+D     G    S
Sbjct: 64  GSTMLTMTLQLPQGIRYGDRIIATGSRPSIRVGPELLGRVIDGTGEPLDSLGPYG-SRRS 122

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M + +  P  ++R  +      G+R ID F     GQR+G+F GSG+GKSTLL M AR  
Sbjct: 123 MPVDAAAPLPLDRLPIRNTLGCGVRAIDAFITCGRGQRLGIFGGSGVGKSTLLGMMARGT 182

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
             D  +++L+GERGREV+EF+E    +  KKS++VV+TSD+SP+L+  A L A  IAEYF
Sbjct: 183 EADLTVMALIGERGREVQEFLEVIGEEGRKKSILVVSTSDQSPLLKMRAALAATAIAEYF 242

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
           +++G NVLL++DS+TRFA + REI   +GE P ++GY  SV + L RL+ER G   K  G
Sbjct: 243 AAEGKNVLLVVDSLTRFAMAQREIGLAAGEPPTSKGYTPSVINTLARLVERAGNFNK--G 300

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL++GD+  DP+ D+VRS+LDGH++L+R+LA +  YPP+  L S+SRL     
Sbjct: 301 SITAFYTVLMEGDDQQDPVVDTVRSLLDGHVILDRNLALQNHYPPISVLDSLSRLMSSIA 360

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           + +      +L  L+  ++ + D+  IG Y+ G D +LD+AV  +P +  FL+Q+  +  
Sbjct: 361 APEHLGKARALRILLASYKRSEDLIRIGAYQKGFDTVLDRAVEVLPELNRFLQQTSEETP 420

Query: 426 SEDVFQEITKKLQ 438
               F  + K+L 
Sbjct: 421 R---FAAVAKRLN 430


>gi|284046066|ref|YP_003396406.1| ATP synthase F1 subunit beta [Conexibacter woesei DSM 14684]
 gi|283950287|gb|ADB53031.1| ATP synthase F1, beta subunit [Conexibacter woesei DSM 14684]
          Length = 470

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 199/422 (47%), Gaps = 17/422 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD--FVVHQGKNSDNLGQVIR- 64
           ++  AE  ++N+    G I  I  V        +++   +    + +G++   + +V + 
Sbjct: 1   MSATAETKTQNV----GRIEEIQGVVIEAVFPPEHLPHINNAITIDRGEDGVLVCEVQQH 56

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +   + ++ G  V   G    +       GR+ N LG+PID    +   +
Sbjct: 57  LGDDRVRAVAMDSTDGLARGVEVKDTGGPITVPVGRATLGRIFNVLGEPIDLAGPVDVQE 116

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I +  P   +     + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     
Sbjct: 117 -RRPIHAAAPNVEDLTPTTEMFETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIQELID 175

Query: 184 SDCFDKVI---ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +         VGER RE  +   +        K+++V    +E P  R    L+ +
Sbjct: 176 NLAREHGGLSAFCGVGERSREGNDLWLEMKESGTIDKTMLVFGQMNEPPGARMRVALSGL 235

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AEYF  +G +VLL +D+I RF  +  E++   G +P   GY  ++ SE+ +L ERI  
Sbjct: 236 TMAEYFRDEGQDVLLFIDNIFRFVQAGSEVSALLGRMPSQVGYQPTLESEMGQLQERI-- 293

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +   +G++T+V +V V  D+  DP   SV + L+   VL+RS++E+G YP VDPL S S 
Sbjct: 294 TSTRQGSVTSVQAVYVPADDLTDPAPASVFAHLNATTVLSRSISEKGIYPAVDPLDSTST 353

Query: 360 LADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +   + + +  ++ R++E +DI  I G     D      V +   +  FL 
Sbjct: 354 ILKPDILGEEHYAVANEVKQILQRYKELQDIIAILGIDELSDED-KVIVQRARKVERFLS 412

Query: 419 QS 420
           Q 
Sbjct: 413 QP 414


>gi|330984969|gb|EGH83072.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 449

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 230/437 (52%), Gaps = 15/437 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINL 67
           A  A     + V   G +S++  +     C      +GD   V +   S  L +++    
Sbjct: 11  AHAARLRDYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDL 124
           +   +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D 
Sbjct: 69  ECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDD 128

Query: 125 SM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  
Sbjct: 129 RRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAEL 188

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R  A  TA  
Sbjct: 189 ARNMGCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATA 248

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G S
Sbjct: 249 IAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMS 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+
Sbjct: 309 EN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRI 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q 
Sbjct: 367 LSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ- 425

Query: 421 PSDLSSEDVFQEITKKL 437
             DL      QE    L
Sbjct: 426 --DLREPVPLQETLDGL 440


>gi|323137978|ref|ZP_08073052.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242]
 gi|322396697|gb|EFX99224.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242]
          Length = 478

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 110/433 (25%), Positives = 190/433 (43%), Gaps = 24/433 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I+ +      V        + + +    +    + +V   +  + V    +   E 
Sbjct: 6   PTGRITQVIGAVVDVKFDGHLPEILNALETTNQGQRLVLEVAQHLGENSVRTIAMDTSEG 65

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+IN +G+P+D    L   +    I    P    + 
Sbjct: 66  LTRGQEVVDTGAPISVPVGDETLGRIINVIGEPVDEAGPLVTANKRA-IHQPAPSYAEQA 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 125 TEAQILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 184

Query: 197 ERGREVREFIEDYLGDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
           ER RE  +   + +   +            K+ +V    +E P  R    LT +T+AE+F
Sbjct: 185 ERTREGNDLYHEMIEGGVNKKPVNGSAAGSKAALVYGQMNEPPGARARVALTGLTVAEHF 244

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 245 RDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKG 302

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+   A 
Sbjct: 303 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAI 362

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  ++   +   + R++  +DI  I G     +      V +   I  FL Q     
Sbjct: 363 VGEEHYEVARKVQSTLQRYKSLQDIIAILGMDELSEED-KLVVARARKIERFLSQP---F 418

Query: 425 SSEDVFQEITKKL 437
              +VF     KL
Sbjct: 419 HVAEVFTGSPGKL 431


>gi|313825423|gb|EFS63137.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL063PA1]
          Length = 545

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKGV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIRAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|307547036|ref|YP_003899515.1| F0F1 ATP synthase subunit alpha [Halomonas elongata DSM 2581]
 gi|307219060|emb|CBV44330.1| F0F1 ATP synthase subunit alpha [Halomonas elongata DSM 2581]
          Length = 514

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 96/442 (21%), Positives = 181/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ + +   + L         G I S++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISDIIKQRIEKLDVASEARNQGTIVSVSDGIVQIHGLAD-AMFGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G   ++  G      GR   +       GRV++ALG PIDG
Sbjct: 60  -IYGMTLNLERDNVGAVVLGDYLQLEEGMTAQCTGRILEVPVGPELRGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG  D +  +    P  + RQ V++  +TG + ID   P+  GQR  +     IGKS
Sbjct: 119 KGELG-TDKTDAVEKVAPGVITRQSVDEPIQTGFKSIDSMVPIGRGQRELIIGDRQIGKS 177

Query: 176 TLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
            +      +        +   +G++   +   +      D ++ ++VV A + +   ++ 
Sbjct: 178 AIAIDAIINQKGKDVTCVYVAIGQKQSTIANVVRKLEEHDAMEHTIVVAAGAADPAPMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +A  +  T+ EYF  +G++ L++ D +++ A + R+++      P    +P  VF    R
Sbjct: 238 LAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAFPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +   G + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEKFTDGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A +   KKL  ++   + ++ E   +     +   +
Sbjct: 358 TDLFNSGVRPAINAGLSVSRVGGSAQTKIIKKLGGTVRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQHQ 436


>gi|268589963|ref|ZP_06124184.1| flagellar protein export ATPase FliI [Providencia rettgeri DSM
           1131]
 gi|291314680|gb|EFE55133.1| flagellar protein export ATPase FliI [Providencia rettgeri DSM
           1131]
          Length = 454

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 156/432 (36%), Positives = 234/432 (54%), Gaps = 18/432 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDIVYIC 73
            +V + G ++ IT +      +   + LG     +    G + + + +V+  N   + + 
Sbjct: 23  PMVRRYGRLTKITGLVMEAEGI--KMPLGATCFIERSINGGSDEVVCEVVGFNGPRMLLM 80

Query: 74  PVGIGEEISLGDLVFH--------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
           P+   E I+ G  V+           R  +       GRV++A G P+DG   L +    
Sbjct: 81  PLADLEGIAPGARVYAQSTGDDGQTSRL-LPIGNELLGRVLDAQGNPLDGKGPL-EVKTR 138

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +++     + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR  
Sbjct: 139 APLITPPINPLERTPISNVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARFT 198

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D +++ L+GERGREV++FIE+ LG D LK++VVV A +D SP+LR      A  IAEY
Sbjct: 199 QADIIVVGLIGERGREVKDFIENILGADGLKRAVVVAAPADVSPLLRMQGASYATRIAEY 258

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F   G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP L+ER G  +   
Sbjct: 259 FRDNGLSVLLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGKN-G 317

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR   + 
Sbjct: 318 GSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTEL 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  + +     L   ++  RD+  +G Y  G D +LD A+   P +  FL+Q   + 
Sbjct: 378 IPKEHYRKIQRFKQLTSSYQRNRDLINVGAYAMGSDPMLDTAIQYYPRMSKFLQQDIDER 437

Query: 425 SSEDVFQEITKK 436
                  E   +
Sbjct: 438 CDYQTACEQLTQ 449


>gi|314983717|gb|EFT27809.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL005PA1]
          Length = 545

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKGV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|262380767|ref|ZP_06073920.1| ATP synthase F1, alpha subunit [Acinetobacter radioresistens SH164]
 gi|262297715|gb|EEY85631.1| ATP synthase F1, alpha subunit [Acinetobacter radioresistens SH164]
          Length = 519

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 96/447 (21%), Positives = 178/447 (39%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LFGMALNLEQDSVGAVVLGSYLNLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKMTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEESGAMAYTTVVAAAAADPAAMQY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSADYVEKFTNGEVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLAGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|253688593|ref|YP_003017783.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755171|gb|ACT13247.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 455

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 233/422 (55%), Gaps = 13/422 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V + G + +++ +     C      +GD   V +  +S  + +V+  + D  ++  +G  
Sbjct: 28  VEKKGRVMAVSGILL--ECSLPQARIGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGAL 85

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI--DGD----DSLGKGDLSMEIMSK 131
           + I+ G  V        I  S    G V++  G+ +  DG+    +       +  ++  
Sbjct: 86  DGIAQGATVTPLYQPHCIQVSERLLGSVLDGFGRALEDDGESAFVEPGHATGRTQPVLGD 145

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP  +R R+ +   TG+R +D    +  GQR+G+FAG+G GK+TLL+  AR+   D ++
Sbjct: 146 APPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIV 205

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
             L+GERGRE+REF+  +   +   ++V+V +TSD S + R  A  TA  IAE + ++G 
Sbjct: 206 FGLIGERGRELREFLDHELDDELRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGR 265

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLLI+DS+TRFA + REI    GE     G P SV++ LPRL+ER G +E   G ITA+
Sbjct: 266 QVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQTED--GAITAL 323

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVL++ D+ NDP+AD VRS++DGHIVL R LAE+G YP +D LAS+SR        D  
Sbjct: 324 YSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHT 383

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +    +  L+  +++   +  +G Y+PG D++ D AV+    I  FL+QS  +     V 
Sbjct: 384 RNAGGVRRLMAAYKQVEMLIRLGEYQPGHDVLTDSAVNAHAEITQFLRQSMREPMPYGVI 443

Query: 431 QE 432
           Q+
Sbjct: 444 QQ 445


>gi|254283924|ref|ZP_04958892.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR51-B]
 gi|219680127|gb|EED36476.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR51-B]
          Length = 514

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 96/447 (21%), Positives = 184/447 (41%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ + +    NL V       G + S++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISDIIKQRIANLDVSSQASNEGTVVSVSDGIIRIHGLTD-AMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  ++++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VFGMALNLERDSVGAVVLGDYKQLAEGQTCRCTGRILEVPVGPALQGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             ++   +    +    P  + RQ V++  + G++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGAVDAKETDA-LEKIAPGVIARQSVDQPVQIGLKAIDSMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++  + +   K I   VG++   V   +     +     ++VV A + +   ++ 
Sbjct: 178 AIAIDAIINQKNTGIKCIYVAVGQKASSVAAVVRKLEENGAMDHTIVVAANASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEAFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 ADMFNAGVRPAMNAGISVSRVGGAAQTKIMKKLSGGVRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      ++    + + +KQ      S
Sbjct: 415 DEATKAQLNHGERVTELMKQKQYSPMS 441


>gi|50842721|ref|YP_055948.1| F0F1 ATP synthase subunit alpha [Propionibacterium acnes KPA171202]
 gi|289428524|ref|ZP_06430208.1| ATP synthase F1, alpha subunit [Propionibacterium acnes J165]
 gi|295130801|ref|YP_003581464.1| ATP synthase F1, alpha subunit [Propionibacterium acnes SK137]
 gi|81692448|sp|Q6A8C5|ATPA_PROAC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|50840323|gb|AAT82990.1| ATP synthase alpha chain [Propionibacterium acnes KPA171202]
 gi|289158218|gb|EFD06437.1| ATP synthase F1, alpha subunit [Propionibacterium acnes J165]
 gi|291375634|gb|ADD99488.1| ATP synthase F1, alpha subunit [Propionibacterium acnes SK137]
 gi|313764227|gb|EFS35591.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL013PA1]
 gi|313791919|gb|EFS40020.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL110PA1]
 gi|313801599|gb|EFS42839.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL110PA2]
 gi|313807742|gb|EFS46229.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL087PA2]
 gi|313810251|gb|EFS47972.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL083PA1]
 gi|313812722|gb|EFS50436.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL025PA1]
 gi|313816320|gb|EFS54034.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL059PA1]
 gi|313818779|gb|EFS56493.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL046PA2]
 gi|313820551|gb|EFS58265.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL036PA1]
 gi|313822644|gb|EFS60358.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL036PA2]
 gi|313827386|gb|EFS65100.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL063PA2]
 gi|313830581|gb|EFS68295.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL007PA1]
 gi|313833617|gb|EFS71331.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL056PA1]
 gi|313838312|gb|EFS76026.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL086PA1]
 gi|314915705|gb|EFS79536.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL005PA4]
 gi|314917926|gb|EFS81757.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL050PA1]
 gi|314920309|gb|EFS84140.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL050PA3]
 gi|314924916|gb|EFS88747.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL036PA3]
 gi|314931529|gb|EFS95360.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL067PA1]
 gi|314955540|gb|EFS99943.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL027PA1]
 gi|314957914|gb|EFT02017.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL002PA1]
 gi|314960559|gb|EFT04661.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL002PA2]
 gi|314962575|gb|EFT06675.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL082PA1]
 gi|314967562|gb|EFT11661.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL037PA1]
 gi|314973582|gb|EFT17678.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL053PA1]
 gi|314975804|gb|EFT19899.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL045PA1]
 gi|314978730|gb|EFT22824.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL072PA2]
 gi|314987898|gb|EFT31989.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL005PA2]
 gi|314989709|gb|EFT33800.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL005PA3]
 gi|315077789|gb|EFT49840.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL053PA2]
 gi|315080416|gb|EFT52392.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL078PA1]
 gi|315085429|gb|EFT57405.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL002PA3]
 gi|315088513|gb|EFT60489.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL072PA1]
 gi|315095856|gb|EFT67832.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL038PA1]
 gi|315098760|gb|EFT70736.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL059PA2]
 gi|315101470|gb|EFT73446.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL046PA1]
 gi|315105843|gb|EFT77819.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL030PA1]
 gi|315108762|gb|EFT80738.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL030PA2]
 gi|327326407|gb|EGE68197.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL096PA2]
 gi|327329863|gb|EGE71617.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL097PA1]
 gi|327331718|gb|EGE73455.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL096PA3]
 gi|327443494|gb|EGE90148.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL013PA2]
 gi|327445697|gb|EGE92351.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL043PA2]
 gi|327448319|gb|EGE94973.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL043PA1]
 gi|327450556|gb|EGE97210.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL087PA3]
 gi|327453362|gb|EGF00017.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL092PA1]
 gi|327454105|gb|EGF00760.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL083PA2]
 gi|328753188|gb|EGF66804.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL025PA2]
 gi|328753973|gb|EGF67589.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL087PA1]
 gi|328754706|gb|EGF68322.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL020PA1]
 gi|328760902|gb|EGF74467.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL099PA1]
 gi|332675645|gb|AEE72461.1| ATP synthase subunit alpha [Propionibacterium acnes 266]
          Length = 545

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKGV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|313772051|gb|EFS38017.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL074PA1]
          Length = 505

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKGV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|260767969|ref|ZP_05876903.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
 gi|260615999|gb|EEX41184.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972]
          Length = 448

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 148/427 (34%), Positives = 237/427 (55%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  +    G +  +  +      +     L    + +    D +  QV+  + ++ Y+ P
Sbjct: 23  SVPVARVTGRLVKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVVGFDHNVAYLMP 80

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V    G   +  S+ W GRV+N LG+ +D    L  GD  + +  K  
Sbjct: 81  IRRLGGLFAGAKVVPLEGDSTVQLSSQWLGRVVNGLGEALDDGAPLRGGD-RVSLEPKPI 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  ++   D +++ 
Sbjct: 140 NPLKRRPVDTPLDVGVRTINGLLTVGKGQRIGLMAGSGVGKSVLMGMITQNTEADVIVVG 199

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFI  +      +K++++ A +DESP++R  A L    +AEYF  +G +V
Sbjct: 200 LIGERGREVREFIERNLTEHTRRKAIIIAAPADESPLMRLRATLLCHRVAEYFRDQGKDV 259

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G S+   G+++A+ +
Sbjct: 260 LLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSDNPDGSLSAIYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR            +
Sbjct: 320 VLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDVNASISRCMSAVTPEAHVTV 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQ 431
            +    L   + + +++  +GGY+PG D  LD+AV   P +  FL+QS  +    +    
Sbjct: 380 ANQFRQLYANYLQVKELLPLGGYQPGQDAELDRAVAMYPHLKAFLQQSAKERVDYNASLT 439

Query: 432 EITKKLQ 438
           ++ +  Q
Sbjct: 440 QLAQLFQ 446


>gi|189017724|gb|ACD71531.1| F1-ATPase alpha subunit [Gymnosiphon minutus]
          Length = 400

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|330502766|ref|YP_004379635.1| flagellum-specific ATP synthase [Pseudomonas mendocina NK-01]
 gi|328917052|gb|AEB57883.1| flagellum-specific ATP synthase [Pseudomonas mendocina NK-01]
          Length = 448

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 154/434 (35%), Positives = 242/434 (55%), Gaps = 14/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ +  + A+  E YS  + +       G +  +  +      L     +G   +    +
Sbjct: 1   MRLDRVSFARRLEGYSDAISLPSQPILEGRLLRMVGLTLEAEGL--RAAVGSRCLVINDD 58

Query: 56  S----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALG 110
           S        +V+  +   +Y+ PVG    I+ G  V       R+       GRV++  G
Sbjct: 59  SYHPVQVEAEVMGFSAGKIYLMPVGSLAGIAPGARVVPLPDAGRLPMGMTMLGRVLDGAG 118

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           + +DG   + K +  + +       +NR  + +    GIR I+    +  GQR+G+FAG+
Sbjct: 119 RALDGKGGM-KAEDWVPMDGPSINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGT 177

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPI 229
           G+GKS LL M  R    + +++ L+GERGREV+EFI++ LG+  LK+SVVV + +D++P+
Sbjct: 178 GVGKSVLLGMMTRFTEAEIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPL 237

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           +R  A      IAEYF  KG NVLL++DS+TR+A + REIA   GE P  +GYP SVF++
Sbjct: 238 MRLRAAQYCTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAK 297

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP+L+ER G +E   G+ITA  +VL +GD+  DPIAD+ R +LDGH VL+R LAEEG YP
Sbjct: 298 LPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYP 357

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD  +S+SR+  +    ++ K       L  R++++RD+  +G Y PG D   D A+ +
Sbjct: 358 AVDIESSISRVMPQVVPPEQLKQAQRFKQLWSRYQQSRDLISVGAYVPGGDADTDLAIAR 417

Query: 410 VPIIYDFLKQSPSD 423
            PI+  +L+Q   +
Sbjct: 418 QPIMAQYLRQGLDE 431


>gi|331092965|ref|ZP_04588468.2| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331022862|gb|EGI02919.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 450

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 151/445 (33%), Positives = 236/445 (53%), Gaps = 18/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
             L+Q  E  +  L     V   G +S++  +     C      +GD   V +   +  L
Sbjct: 4   AALSQWQEQQAARLSRYSAVRVSGRVSAVRGILL--ECKIPSAKVGDLCEVSKADGTLML 61

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGD 116
            +++    +   +  +G  + + +G  +   G   RI       G V++  G+P+  D  
Sbjct: 62  AEIVGFTQECTLLSALGAPDGVQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLMGDCQ 121

Query: 117 DSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    D       +++   P   R R+ +   TGIR ID    L  GQR+G+FAG+G G
Sbjct: 122 GAFAGPDDRRTTLPVIADALPPTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCG 181

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           K+TL++  AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R 
Sbjct: 182 KTTLMAELARNMDCDVIVFGLIGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERA 241

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE + ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPR
Sbjct: 242 RAAFTATAIAEAYRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPR 301

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G SE+  G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D
Sbjct: 302 LVERAGMSEE--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 359

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+         ++  + L  L+  +++   +  +G Y+ G D + D AV     
Sbjct: 360 VSASISRILSNVTDRAHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDA 419

Query: 413 IYDFLKQSPSD-LSSEDVFQEITKK 436
           I  FL+Q   + +  ++   E+ + 
Sbjct: 420 INAFLRQDLREPVPLQETLDELVRL 444


>gi|224477093|ref|YP_002634699.1| ATP synthase alpha chain (fragment 2) [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|222421700|emb|CAL28514.1| truncated ATP synthase alpha chain (fragment 2) [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 455

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 103/384 (26%), Positives = 164/384 (42%), Gaps = 13/384 (3%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWC 102
             G+ V         LG    +    V I  +G   +I  GD V   GR   +       
Sbjct: 1   MAGELVEFHNG---VLGLAQNLEESNVGIVILGPYTDIKEGDEVKRTGRIMEVPVGEELI 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+P+DG   + K D +  +  K    M RQ V++  +TGI+ ID   P+  GQ
Sbjct: 58  GRVVNPLGQPLDGQGPI-KTDKTRPVEEKATGVMARQSVDEPLQTGIKAIDALVPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  +      GK+T+   ++  ++D     I   +G++   VR  +E          ++V
Sbjct: 117 RELIIGDRQTGKTTIAIDTILNQADQDMICIYVAIGQKESTVRATVEKLRQSGALDYTIV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V A++ +   L  +AP + VT+ E F   G  VL++ D +T+ A + RE++      P  
Sbjct: 177 VTASAADLAPLLYIAPYSGVTMGEEFMFNGKQVLIVYDDLTKQAAAYRELSLLLRRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  VF    RLLER          G+ITA+  +     + +  +  +V SI DG I 
Sbjct: 237 EAYPGDVFYLHSRLLERAAKLNDSLGGGSITALPIIETQAGDISAYVPTNVISITDGQIF 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L   G  P ++   SVSR+   A     KK+  +L   +  + E       G    
Sbjct: 297 LESDLFFSGVRPAINAGFSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFG---S 353

Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421
            +D    + + +     + LKQ  
Sbjct: 354 DLDEFTARKLERGKRTVEVLKQPQ 377


>gi|34539213|gb|AAQ74490.1| F1-ATPase alpha subunit [Behnia reticulata]
          Length = 404

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 158/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 120 LIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 179

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 180 ALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 239

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 240 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 300 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VA 356

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 357 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 387


>gi|271500083|ref|YP_003333108.1| flagellar protein export ATPase FliI [Dickeya dadantii Ech586]
 gi|270343638|gb|ACZ76403.1| flagellar protein export ATPase FliI [Dickeya dadantii Ech586]
          Length = 456

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 159/452 (35%), Positives = 241/452 (53%), Gaps = 22/452 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M   L       + + K +     + + G ++  T +    T L  ++ LG   + + + 
Sbjct: 1   MTVRLSRWLSSIDAFEKRITNTPSIRRYGRLTRATGLVLEATGL--HMPLGSTCLIERQT 58

Query: 56  SDNL----GQVIRINLDIVYICPVGIGEEISLGDLVF--------HWGRFRISPSACWCG 103
            + +     +V+  N   +++ P+   E I  G  V+          G+ ++       G
Sbjct: 59  GNQVDEVESEVVGFNGQKMFLMPLEEVEGIIPGARVYERVGLSGSSQGK-QLPLGPALLG 117

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV++   KP+DG  +   G  S  +M+     + R  +E     G+R I+    +  GQR
Sbjct: 118 RVLDGSAKPLDGLPTPDTG-YSAPLMTAPFNPLQRTPIEHVLDVGVRAINALLTVGRGQR 176

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222
           +G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVV+ A
Sbjct: 177 MGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSVVIAA 236

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GY
Sbjct: 237 PADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R L
Sbjct: 297 PPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQL 356

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR        +    V      +  ++  RD+  +G Y  G D +
Sbjct: 357 AESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAGSDPM 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           LD+A+   P +  FL+Q   + SS D   +  
Sbjct: 417 LDRAIQLYPQMQHFLQQGMFERSSFDEACQAL 448


>gi|255320600|ref|ZP_05361777.1| ATP synthase F1, alpha subunit [Acinetobacter radioresistens SK82]
 gi|255302216|gb|EET81456.1| ATP synthase F1, alpha subunit [Acinetobacter radioresistens SK82]
          Length = 514

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 96/447 (21%), Positives = 178/447 (39%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 60  -LFGMALNLEQDSVGAVVLGSYLNLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPID-AKMTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 178 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEESGAMAYTTVVAAAAADPAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSADYVEKFTNGEVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLAGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQYAPYS 441


>gi|289577864|ref|YP_003476491.1| ATP synthase F1 subunit beta [Thermoanaerobacter italicus Ab9]
 gi|289527577|gb|ADD01929.1| ATP synthase F1, beta subunit [Thermoanaerobacter italicus Ab9]
          Length = 461

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 118/405 (29%), Positives = 190/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           GYI+ +      +    +   + + +     + + + +V +   D  V    +   + + 
Sbjct: 4   GYITQVIGPVVDIKFEGELPPINNAIKIPMGDRELIVEVSQHVGDNIVRCIAMAPTDGLQ 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR+ N LG+PID    +      M I  K PP   +   
Sbjct: 64  RGMECIDTGNTIMVPVGKGTLGRMFNVLGQPIDELGEVNDVKY-MSIHRKAPPFEEQSPA 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +    S+   VGER
Sbjct: 123 TEILETGIKVIDLLTPYPKGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGER 182

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  E   +     +  K+  V    +E P  R    L  +T+AEYF  +   +VLL +
Sbjct: 183 SREGNELWHEMQESGVLDKTAFVFGQMNEPPGARMRVALAGLTMAEYFRDEEHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +  +KG+IT+V +V V 
Sbjct: 243 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +     +E   +   
Sbjct: 301 ADDLTDPAPATTFTHLDATTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYSVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V++   I  FL Q 
Sbjct: 361 VQEILERYKELQDIIAILGMEELTDED-KLIVYRARKIQRFLSQP 404


>gi|254457549|ref|ZP_05070977.1| flagellum-specific ATP synthase [Campylobacterales bacterium GD 1]
 gi|207086341|gb|EDZ63625.1| flagellum-specific ATP synthase [Campylobacterales bacterium GD 1]
          Length = 438

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 161/427 (37%), Positives = 239/427 (55%), Gaps = 10/427 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73
           SKN  V  G +  I +   T   LS  V + D V  +      + +G V  I+    +I 
Sbjct: 12  SKNYSVAFGEVIKINATIITAKGLS--VSISDMVKIISNSTAQETMGMVTEIDGATFFIT 69

Query: 74  PVGIGEEISLGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           P    E    GD VF    G   I       GRV++   +PID   ++    +S  I+  
Sbjct: 70  PFSFVEGFCSGDRVFLDQTG-MNIPVGQALLGRVVDPFMRPIDEKGTISSIKMS-PIIKA 127

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
              AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  +       +
Sbjct: 128 PIAAMKRGMIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKGSTAPIKV 187

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           ++L+GERGREV EFIE  LG +L+ +V++VATSD+SP++RK     A+++AEYF  +G +
Sbjct: 188 VALIGERGREVPEFIEKNLGGDLENTVIIVATSDDSPLMRKYGAFAAMSVAEYFKDQGLD 247

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E  KG+ITA  
Sbjct: 248 VLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAGK-EDGKGSITAFF 306

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++GD+ +DPIAD  RSILDGHIVL+R L + G YPP+  L S SR+ +   S +  +
Sbjct: 307 TVLIEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPIHILNSASRVMNDIISKEHLQ 366

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVF 430
           +V     L    +E   +  IG Y  G D  LD+A+++   +  F+ Q  +   + +D  
Sbjct: 367 MVMKFRRLYTLLKENEMLIRIGAYVKGTDSELDEAMNKKEGMEKFMSQDANMQTNYQDTL 426

Query: 431 QEITKKL 437
            E+T  +
Sbjct: 427 DELTALM 433


>gi|34500873|gb|AAQ73901.1| HrcN [Pectobacterium carotovorum subsp. carotovorum]
          Length = 455

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 148/449 (32%), Positives = 236/449 (52%), Gaps = 21/449 (4%)

Query: 1   MQKNLETL-------AQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VH 51
           MQ    +        AQ  +  +    V + G + +++ +     C      +GD   V 
Sbjct: 1   MQTQPSSFPLLDQWVAQQRQHLASYAPVEKKGRVMAVSGILL--ECSLPQARIGDLCWVA 58

Query: 52  QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALG 110
           +  +S  + +V+  + D  ++  +G  + I+ G  V        I  S    G V++  G
Sbjct: 59  RQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGATVTPLYQPHCIQVSDRLLGSVLDGFG 118

Query: 111 KPIDGDD------SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + ++                +  ++   PP  +R R+ +   TG+R +D    +  GQR+
Sbjct: 119 RALEAGGESAFVEPGHATGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLLTIGQGQRV 178

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVAT 223
           G+FAG+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   ++V+V +T
Sbjct: 179 GIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLVCST 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           SD S + R  A  TA  IAE + ++G  VLLI+DS+TRFA + REI    GE     G P
Sbjct: 239 SDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLALGEPQGRGGLP 298

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SV++ LPRL+ER G +E   G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL R LA
Sbjct: 299 PSVYTLLPRLVERAGQTED--GAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLARRLA 356

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E+G YP +D LAS+SR        +  +    +  L+  +++   +  +G Y+PG D + 
Sbjct: 357 EQGHYPAIDVLASLSRTMSNVVDTEHTRNAGGVRRLMAAYKQVEMLIRLGEYQPGHDELT 416

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
           D AV+    I  FL+QS  +     V Q+
Sbjct: 417 DSAVNAQAEITQFLRQSMREPMPYGVIQQ 445


>gi|34539351|gb|AAQ74559.1| F1-ATPase alpha subunit [Lachnocaulon anceps]
          Length = 406

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 89/401 (22%), Positives = 161/401 (40%), Gaps = 22/401 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G    +  + V +   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGLVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVGERGREVR 203
              P+  GQR  +      GK+ +      +                +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSKGTESETLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++          S++V AT+ +   L+ +AP +   + E F     + L+I D +++ 
Sbjct: 176 QLVQILEEAMAMEYSILVAATASDPAPLQFLAPYSGCAMGEDFRDNRMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER+     +   G+ TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERVAKRSDQTGAGSSTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  SL   +
Sbjct: 296 SAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSLKLEL 355

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 AQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 393


>gi|319764512|ref|YP_004128449.1| flagellar protein export atpase flii [Alicycliphilus denitrificans
           BC]
 gi|330826728|ref|YP_004390031.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans
           K601]
 gi|317119073|gb|ADV01562.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans
           BC]
 gi|329312100|gb|AEB86515.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans
           K601]
          Length = 467

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 153/439 (34%), Positives = 230/439 (52%), Gaps = 24/439 (5%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           A    +  +   G ++ +T +      L   V     V   G+    L +V+    D  +
Sbjct: 18  ARMAQELPLETRGTLTRLTGLVLEAAGLRVPVGAQCQVRMAGQE-PVLAEVVGFAGDKAF 76

Query: 72  ICPVGIGEEISLGDLVFHW---------------------GRFRISPSACWCGRVINALG 110
           + P G    +S G  V                        G  R+       GRV+++ G
Sbjct: 77  LMPAGDIHGLSSGASVTPAAAYVPVPRLGGAGHDPEAAGAGVLRLPMGDGLLGRVVDSQG 136

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    L +   ++ +      AM R  V +   TG+R I+    +  GQR+G+FAGS
Sbjct: 137 QPLDHGGPLERV-TALPMDRSPINAMERDPVREPLDTGVRAINALLTVGRGQRLGLFAGS 195

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL 230
           G+GKS LL M AR    D +++ L+GERGREV+EF+ED LG+  +   VVVA   ++P L
Sbjct: 196 GVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGETDRGRAVVVAAPADAPPL 255

Query: 231 RKM-APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
            +M     A  IAE+F  +G +VLL++DS+TR+A + REIA   GE P  +GYP S F++
Sbjct: 256 LRMQGAAYATAIAEHFRDQGRHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAK 315

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE G YP
Sbjct: 316 LPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRALAESGHYP 375

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   S SR+     S     +      +  R++++RD+  +G Y  G D +LD+A+  
Sbjct: 376 AIDIEQSASRVMHNVVSRSHFDMARGFRAIYSRYQKSRDLIQVGAYMSGSDPLLDEAIRL 435

Query: 410 VPIIYDFLKQSPSDLSSED 428
            P +  FL+Q   + +S D
Sbjct: 436 QPGMTAFLQQDMFEAASMD 454


>gi|170782291|ref|YP_001710624.1| F0F1 ATP synthase subunit alpha [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156860|emb|CAQ02028.1| ATP synthase alpha chain [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 552

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 94/432 (21%), Positives = 167/432 (38%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y   K    + GY+         V  L   V   + +         LG   
Sbjct: 20  DALKDFVQSYEPGKASTTEVGYVLDAGDGIAHVQGL-PGVMANELITFADG---TLGLAQ 75

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 76  NLEESEIGVIVLGEFAGIEEGMEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGQGEI-AN 134

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 135 EGRRALELQAPGVMQRKSVHEPMQTGIKAIDAMIPIGRGQRQLIIGDRQTGKTAIAIDTI 194

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +               + +V + + +    +
Sbjct: 195 INQKANWESGDTNKQVRCIYVAIGQKGSTIASVRGALEEAGAMEYTTIVASPASDPAGFK 254

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 255 YLAPYTGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 314

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 315 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 374

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D    + + +
Sbjct: 375 AVDVGISVSRVGGDAQVKSIKKVSGTLKLELAQYRSLE---AFAIFASDLDAASRRQLAR 431

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 432 GARLTELLKQPQ 443


>gi|164685580|gb|ABY66736.1| atp1 [Canna indica]
          Length = 411

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 91/405 (22%), Positives = 162/405 (40%), Gaps = 21/405 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIAXNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERG 199
           ++ +D   P+  GQR  +      GK+ +      +               +   +G++ 
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D 
Sbjct: 176 STVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D      ++    + +  KQ  
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNXXARLTEVPKQPQ 397


>gi|89889660|ref|ZP_01201171.1| ATP synthase alpha chain [Flavobacteria bacterium BBFL7]
 gi|89517933|gb|EAS20589.1| ATP synthase alpha chain [Flavobacteria bacterium BBFL7]
          Length = 524

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 107/453 (23%), Positives = 172/453 (37%), Gaps = 37/453 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q    +     + + G + ++      V  LS     G+ V      S   G V+ 
Sbjct: 11  AILKQQLSGFDATASLDEVGTVLTVGDGIARVYGLS-NAQYGELVAF---TSGIEGIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    I+ GD V    R   +       GRV+N LG+PIDG  ++    
Sbjct: 67  LEEDNVGVVLLGPSTGIAEGDTVKRTQRIASLKVGEGIVGRVVNTLGEPIDGKGAIEGDL 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      
Sbjct: 127 YEMPLERKAPGVVFRQPVTEPLQTGIKSIDAMIPVGRGQRELVIGDRQTGKTTVCIDTIL 186

Query: 184 SDCF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +             I   +G++   V    +          + +V A + +   ++  AP
Sbjct: 187 NQKEFYDAGEPVYCIYVAIGQKASTVANIAKVLEEKGALAYTTIVAANASDPAAMQVYAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
               +I EYF   G   L+I D +++ A + REI+      P    YP  VF    RLLE
Sbjct: 247 FAGASIGEYFRDTGRPALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDVFFLHSRLLE 306

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 307 RAAKVIADDEIAKNMNDLPDSLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 366

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L   G  P ++   SVSR+   A     KK+  +L      F E         +
Sbjct: 367 IFLDGDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVSGTLKLDQAAFRELE---AFAKF 423

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +D      + +     + LKQ+ +D  + +
Sbjct: 424 GSDLDATTLGVIEKGKRNVEILKQAENDPYTVE 456


>gi|189017742|gb|ACD71540.1| F1-ATPase alpha subunit [Tacca integrifolia]
          Length = 400

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 158/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQIHSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++       + ++ E   + 
Sbjct: 305 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGGSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 362 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 392


>gi|156530151|gb|ABU75172.1| AtpB [Perriera madagascariensis]
          Length = 498

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 184/422 (43%), Gaps = 29/422 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434

Query: 421 PS 422
             
Sbjct: 435 LF 436


>gi|148550497|ref|YP_001270599.1| F0F1 ATP synthase subunit alpha [Pseudomonas putida F1]
 gi|166990362|sp|A5WBA5|ATPA_PSEP1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148514555|gb|ABQ81415.1| ATP synthase F1, alpha subunit [Pseudomonas putida F1]
          Length = 514

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 185/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDNLDVSSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVILGAYDTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG       +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTQTDA-VEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +   ++  + +     +   VG++   V   +           ++VVVA++ ES  L+ 
Sbjct: 178 AMAIDAIINQKNSGIFCVYVAVGQKRSTVANIVRKLEETGALANTIVVVASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|315103536|gb|EFT75512.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL050PA2]
          Length = 545

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 174/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G   
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGNPVDGLGEIKDV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPQKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|186886323|gb|ACC93564.1| ATPase F1 alpha subunit [Juncus filiformis]
          Length = 369

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 159/372 (42%), Gaps = 21/372 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLIL 403
              +   +D   
Sbjct: 355 FAQFGSDLDAAT 366


>gi|294143106|ref|YP_003559084.1| ATP synthase F1 subunit beta [Shewanella violacea DSS12]
 gi|293329575|dbj|BAJ04306.1| ATP synthase F1, beta subunit [Shewanella violacea DSS12]
          Length = 458

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 187/410 (45%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G +  +      V      V      ++      + G V+     I   +V    +G
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQ----IYDALEIKSEGLVLEVQQQIGGGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +   +   GR++N LG+PID    +G  D  + I  + P  
Sbjct: 57  SSDGLRRGLEVTNTGSPITVPVGSVTLGRIMNVLGEPIDEAGPIGGTDHYV-IHREAPTF 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 116 EDQSSSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYYEMKDAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  IVL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + + +  ++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 354 DVANGVQTVLQRYKELKDIIAILGMDELSDED-KTTVARARKIEKYLSQP 402


>gi|186886317|gb|ACC93561.1| ATPase F1 alpha subunit [Juncus balticus]
 gi|186886321|gb|ACC93563.1| ATPase F1 alpha subunit [Juncus effusus]
          Length = 369

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 355 FAQFGSDLDAATQ 367


>gi|50954452|ref|YP_061740.1| F0F1 ATP synthase subunit alpha [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|81612770|sp|Q6AG60|ATPA_LEIXX RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|50950934|gb|AAT88635.1| ATP synthase, alpha chain [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 545

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 100/447 (22%), Positives = 175/447 (39%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L      Y   K    + G++   +     V  L   V   + +         LG   
Sbjct: 13  DALKDFVSKYEPAKAATAEVGHVLDASDGIAHVEGL-PGVMANELIRFADG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++ + + +  +G  E I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLDENEIGVVVLGEFEGIVEGMEVTRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +   E+  + P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRELELQAPGVMHRKSVHEPLQTGIKAIDAMIPVGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D       I   VG++G  +               + +V A + +    +
Sbjct: 188 INQKANWESGDVTKQVRCIYVAVGQKGSTIAAVKGALEDAGAMEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGDAQVKSIKKVSGTLKLELAQYRSLE---AFAMFASDLDAASRRQLAR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   S    E+    I  
Sbjct: 425 GARLTELLKQPQYSPYPVEEQVVSIWA 451


>gi|77361906|ref|YP_341481.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas haloplanktis
           TAC125]
 gi|115312266|sp|Q3IK48|ATPA_PSEHT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|76876817|emb|CAI88039.1| membrane-bound ATP synthase, F1 sector, alpha-subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 513

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I S+T     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFEVVSEARNEGTIVSVTDGIIRIHGLAD-CMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D +    +G   +++ G  V+  GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGPGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   D    +    P  + R+ V++  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGALD-NDGFEPVEKIAPGVIERKSVDEPVQTGYKSIDAMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +      K +   +G++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKGTGVKCVYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPFAGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  +   G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVEKFTNGEVKGTTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|307547034|ref|YP_003899513.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581]
 gi|307219058|emb|CBV44328.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581]
          Length = 458

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 121/406 (29%), Positives = 195/406 (48%), Gaps = 14/406 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
            G I  I      V      V  + D +     NS+ + +V + +   +V    +G  E 
Sbjct: 2   SGRIVQIIGAVIDVEFPRDEVPKVYDALTV--SNSETILEVQQQLGDGVVRTIAMGSTEG 59

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + +      +       GR++N LG+PID    +G+ +  M I  K P   ++ 
Sbjct: 60  LKRGIEITNTDAAISVPVGEATLGRIMNVLGEPIDEAGEIGEQE-RMPIHRKAPGYADQA 118

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             E+  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 119 ATEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVG 178

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F  +G +VLL 
Sbjct: 179 ERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLF 238

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V
Sbjct: 239 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYV 296

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  S LD  +VL RS+AE G YP +DPL S SR  D      +  K+  
Sbjct: 297 PADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDPLVIGEEHYKVAR 356

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 357 GVQGVLQRYKELKDIIAILGMDELSDED-KQTVARARKIQRFLSQP 401


>gi|167717597|ref|ZP_02400833.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei
           DM98]
          Length = 454

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 149/432 (34%), Positives = 223/432 (51%), Gaps = 18/432 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
              G ++    +      L   + +G     +      L     +V+    + +++ P  
Sbjct: 20  RPCGRLTRAAGLVLEAIGL--RLSVGAECTIELPAGSALPYAQAEVVGFAGERLFLMPTT 77

Query: 77  IGEEISLGDLVFHW----------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
               +  G  V+            G  R+       GRV++A G+P+D    L    +  
Sbjct: 78  AVAGVLPGARVWPLESAPVADPLAGAKRLPVGWEMLGRVVDASGRPLDNLGPL-ASKVDA 136

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +     ++R+ +      G+R I+    +  GQR+G+FAGSG+GKS LL   AR   
Sbjct: 137 PLTAPSINPLDREPIHHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTS 196

Query: 187 FDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            + ++I L+GERGREV+EFI +    D L +SVVV A +D SP+LR      A T+AEYF
Sbjct: 197 AEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYF 256

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G
Sbjct: 257 RDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGG 316

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGH+VL+RSLAE G YP +D  AS+SR      
Sbjct: 317 SITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAEAGHYPAIDIEASISRAMTALI 376

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
                  V     ++ R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +
Sbjct: 377 DDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECA 436

Query: 426 SEDVFQEITKKL 437
                      L
Sbjct: 437 PYAPSLAALDAL 448


>gi|153831717|ref|ZP_01984384.1| FliIL [Vibrio harveyi HY01]
 gi|148872227|gb|EDL71044.1| FliIL [Vibrio harveyi HY01]
          Length = 449

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 152/436 (34%), Positives = 242/436 (55%), Gaps = 7/436 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L+  LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSDALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             +  + Y+ P+     +  G  V    G   +  S+ W GRV+N LG+P D    L  G
Sbjct: 70  GFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGAPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 D-RVSLEPKPINPLKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREF+  +   +  KK+++V A +DESP++R  A L    +
Sbjct: 189 QNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G S+
Sbjct: 249 AEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSD 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +         + ++   L   + + +++  +GGY+PG D  LD++V   P +  +L+QS 
Sbjct: 369 NACTHEAHSTIANNFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRAYLQQSA 428

Query: 422 SDLSSEDVFQEITKKL 437
           ++            ++
Sbjct: 429 NEAVDYPTSLTALAQM 444


>gi|225376569|ref|ZP_03753790.1| hypothetical protein ROSEINA2194_02211 [Roseburia inulinivorans DSM
           16841]
 gi|225211606|gb|EEG93960.1| hypothetical protein ROSEINA2194_02211 [Roseburia inulinivorans DSM
           16841]
          Length = 500

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 178/423 (42%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L    E+Y       + G +  +     T+  + ++   G+ V+ +       G V 
Sbjct: 10  ISILKTEIENYDMVSGEQEVGSVIWVGDGIATIYGI-EHAMYGEIVIFENG---IRGMVQ 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  D +    +G   EI  G  V    +   +     + GR+INALG PIDG   +   
Sbjct: 66  DIRRDQIGCIILGKDTEIKEGTKVTRTKKKAGVPVGNDYLGRIINALGAPIDGKGEIPAD 125

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  + P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 126 DYRA-IEQEAPGIVDRQSVNQPLETGILAIDAMFPIGRGQRELIIGDRQTGKTSIAVDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +      D L  +VV+ AT+ ES  L+ +AP    
Sbjct: 185 LNQKGKDVICIYVAIGQKASTVAKLVNTLTKHDALDYTVVLSATASESASLQYIAPYAGT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYQGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSK 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 305 LSDALGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   ++   + ++ E     +   +   +D    + +     + + L
Sbjct: 365 SRVGGAAQTKAMKKASGTIRIDLAQYREME---VFTQFSSDLDDTTKEQLQYGKGLMELL 421

Query: 418 KQS 420
           KQ 
Sbjct: 422 KQP 424


>gi|34539247|gb|AAQ74507.1| F1-ATPase alpha subunit [Ceratophyllum demersum]
          Length = 414

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 93/406 (22%), Positives = 166/406 (40%), Gaps = 23/406 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG+
Sbjct: 57  GSILDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++   G N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILSGANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 356 SKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 398


>gi|6561643|gb|AAF16987.1|AF197655_1 ATPase alpha subunit [Platanus occidentalis]
          Length = 410

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 165/403 (40%), Gaps = 23/403 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 ELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 395


>gi|82795273|gb|ABB91642.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tagetis]
          Length = 449

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 154/445 (34%), Positives = 232/445 (52%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
             L+Q    ++  L     V   G +S++  +     C      +GD   V +      L
Sbjct: 3   AALSQWKATHAARLSQYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGGMLL 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGD 116
            +++    +   +  +G  + I +G  +   G   RI       G V++  G+P+  D  
Sbjct: 61  AEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCL 120

Query: 117 DSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    +       +++   P   R R+     TG+R ID    L  GQR+G+FAG+G G
Sbjct: 121 GAFAGPEDRRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCG 180

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           K+TL++  AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R 
Sbjct: 181 KTTLMAELARNMGCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERA 240

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPR
Sbjct: 241 RAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPR 300

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G SE   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D
Sbjct: 301 LVERAGMSEN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+       + ++  + L  L+  +++   +  +G Y+ G D + D AV     
Sbjct: 359 VSASISRILSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDA 418

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+Q   DL      QE    L
Sbjct: 419 INAFLRQ---DLREPVPLQETLDGL 440


>gi|254243102|ref|ZP_04936424.1| ATP synthase alpha chain [Pseudomonas aeruginosa 2192]
 gi|126196480|gb|EAZ60543.1| ATP synthase alpha chain [Pseudomonas aeruginosa 2192]
          Length = 514

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ ++  + L         G I S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKERIEKLDVASQARNEGTIVSVSDGIVRIYGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGEYQGLAEGMNAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPID-AKATDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L      +  D   K +   +G++   +   +     +     ++VV A++ ES  L+ 
Sbjct: 178 ALAVDAIINQKDSGIKCVYVAIGQKQSTIANVVRKLEENGALANTIVVAASASESAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|324114216|gb|EGC08189.1| ATPase FliI/YscN family protein [Escherichia fergusonii B253]
 gi|325497683|gb|EGC95542.1| flagellum-specific ATP synthase [Escherichia fergusonii ECD227]
          Length = 456

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 161/441 (36%), Positives = 241/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +      +   +V+  N 
Sbjct: 17  AKMAQLPTVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQEGTETREVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISGDGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGFL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +S E+  Q + +  
Sbjct: 433 QQGIFERASWEESLQGLERIF 453


>gi|256390418|ref|YP_003111982.1| F0F1 ATP synthase subunit alpha [Catenulispora acidiphila DSM
           44928]
 gi|256356644|gb|ACU70141.1| ATP synthase F1, alpha subunit [Catenulispora acidiphila DSM 44928]
          Length = 544

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 98/455 (21%), Positives = 181/455 (39%), Gaps = 29/455 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV------QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           +    E +    E +  +         + G ++ I      V  L       + +  +  
Sbjct: 4   LTIRPEEIRDALERFVASYEAPEASKDEVGTVTEIGDGIAKVEGL-PSAMTNELLKFEDG 62

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPI 113
               LG  + +++  + +  +G  E I  G  V   G          + GRV+N LG+PI
Sbjct: 63  ---TLGIALNLDVREIGVVVLGDYEGIEEGQRVARTGEILSTPVGDSFMGRVVNPLGEPI 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + + + +  +  + P  M RQ V++  +TGI+ ID  TP+  GQR  +      G
Sbjct: 120 DGLGPI-EAEGTRILELQAPGVMARQSVKEPLQTGIKAIDSMTPIGRGQRQLIIGDRQTG 178

Query: 174 K-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVA 222
           K      T+++     +  D     + I   +G++G  +             K + +V A
Sbjct: 179 KTAVAVDTIINQKQNWESGDPKKQVRCIYVAIGQKGSTIAAVKGALEEAGAMKYTTIVAA 238

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + ++   + +AP T   I +++   G +VL++ D +T+ A + R ++      P    Y
Sbjct: 239 PASDAAGFKYLAPYTGSAIGQHWMYDGKHVLIVFDDLTKQAEAYRSMSLLLRRPPGREAY 298

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG      
Sbjct: 299 PGDVFYLHSRLLERCAKLNDEMGGGSMTGLPVIETKANDISAFIPTNVISITDGQCFFET 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     + +  SL   + +F   RD+     +   +D
Sbjct: 359 DLFNSGVRPAINVGTSVSRVGGSAQVKAMRSVSGSLRVDLAQF---RDLEAFAAFASDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434
                 + +   + + LKQ   +    E+    I 
Sbjct: 416 DASKAQLARGQRMVEILKQGQYEPYPVEEQVASIW 450


>gi|163751422|ref|ZP_02158647.1| ATP synthase subunit B [Shewanella benthica KT99]
 gi|161328725|gb|EDP99873.1| ATP synthase subunit B [Shewanella benthica KT99]
          Length = 458

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 186/410 (45%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G +  +      V      V      ++      + G V+     I   +V    +G
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQ----IYDALEIKSEGLVLEVQQQIGGGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +   +   GR++N LG+PID    +G  D  + I  + P  
Sbjct: 57  TSDGLRRGLEVTNTGSPITVPVGSVTLGRIMNVLGEPIDEAGPIGGTDHYV-IHREAPTF 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 116 EEQSSSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYYEMKDAGVLDKVTMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLFFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  IVL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + + +  ++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 354 DVANGVQTVLQRYKELKDIIAILGMDELSDED-KTTVARARKIEKYLSQP 402


>gi|148361324|ref|YP_001252531.1| ATP synthase subnit alpha [Legionella pneumophila str. Corby]
 gi|190358155|sp|A5III5|ATPA2_LEGPC RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|148283097|gb|ABQ57185.1| F0F1-ATPase subunit alpha, ATP synthase alpha chain [Legionella
           pneumophila str. Corby]
          Length = 517

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 178/445 (40%), Gaps = 30/445 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   +++L         V       G I S+      +  L+  V  G+ +   G     
Sbjct: 8   NPSEISELIRKKIDQFSVVSEARNEGTIVSLKDGIVRLHGLAD-VMAGEMIEFPGG---V 63

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG  
Sbjct: 64  YGLALNLKRDSVGAVILGDSSTLAEGQKGKCTGRILEVPVGKGLLGRVVDALGNPIDGKG 123

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    +S  I    P  + R+ +++  +TG++ ID   P+  GQR  +      GK+ +
Sbjct: 124 PIESSGMS-PIEKVAPGVVTRKSIDQPVQTGLKAIDAMIPVGRGQRELIIGDRQTGKTAI 182

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +      K +   +G++   V   +         + ++VVVA + +S  L+ +A
Sbjct: 183 AIDAIINQKGTGVKCVYVAIGQKASSVASIVRKLEEHGALEHTIVVVAGASDSAALQYIA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P    T+ EYF  +G++ L++ D +T+ A + R+I+      P    YP  +F    RLL
Sbjct: 243 PYAGCTMGEYFMERGEDALIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDIFYLHSRLL 302

Query: 295 ERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER                   + G++TA+  +     + +  +  +V SI DG I L+  
Sbjct: 303 ERAARINADEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLDVD 362

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A +   KKL       + +F E         +   +D 
Sbjct: 363 LFNSGVRPAINSGLSVSRVGGAAQTKIMKKLGGGTRLALAQFRELE---AFSQFASDLDD 419

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
              K + +   I + +KQ      +
Sbjct: 420 ATRKQLERGQRITELMKQKQYSPLT 444


>gi|34539265|gb|AAQ74516.1| F1-ATPase alpha subunit [Convallaria keiskei]
          Length = 404

 Score =  288 bits (738), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 158/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 120 LIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 179

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 180 ALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 239

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 240 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 300 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VA 356

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 357 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 387


>gi|257487229|ref|ZP_05641270.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331009157|gb|EGH89213.1| type III secretion component protein HrcN [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 449

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 230/437 (52%), Gaps = 15/437 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINL 67
           A  A     + V   G +S++  +     C      +GD   V +   S  L +++    
Sbjct: 11  AHAARLRDYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDL 124
           +   +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D 
Sbjct: 69  ECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGQDD 128

Query: 125 SM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  
Sbjct: 129 RRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAEL 188

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R  A  TA  
Sbjct: 189 ARNMGCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATA 248

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G S
Sbjct: 249 IAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMS 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+
Sbjct: 309 EN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRI 366

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q 
Sbjct: 367 LSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ- 425

Query: 421 PSDLSSEDVFQEITKKL 437
             DL      QE    L
Sbjct: 426 --DLREPVPLQETLDGL 440


>gi|21633425|gb|AAM52187.1| ATP synthase beta subunit [Maripa glabra]
          Length = 487

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 185/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      VT    +   + + +V QG++++   +V ++  +  V    +   + +
Sbjct: 21  GRIVQIIGPVLDVTFPPGKMPNIYNALVVQGRDNNVTCEVQQLLGNNRVRAVAMSDTDGL 80

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LG+P+D    +   + +  I    P  +    
Sbjct: 81  MRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQLDT 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 140 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 199

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 200 RTREGNDLYMEMKESRVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 259

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 260 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 317

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 318 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 377

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|220927118|ref|YP_002502420.1| F0F1 ATP synthase subunit beta [Methylobacterium nodulans ORS 2060]
 gi|219951725|gb|ACL62117.1| ATP synthase F1, beta subunit [Methylobacterium nodulans ORS 2060]
          Length = 484

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 110/432 (25%), Positives = 192/432 (44%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G+I+ +      V        + + +  + + +  + +V +++  + V    +   E + 
Sbjct: 15  GHITQVIGAVVDVQFDGHLPEILNALETKNQGNRLVLEVAMQLGENTVRCIAMDTSEGLV 74

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   R+   A   GR++N +G+PID    +   +    I    P    +   
Sbjct: 75  RGQEVTDTGAPIRVPVGANTLGRIMNVIGEPIDEAGEI-AAESYRAIHQPAPTYAEQSTE 133

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 134 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAGVGER 193

Query: 199 GREVREFIEDYLG------------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            RE  +   + +                 K  +V    +E P  R    LT +T+AE+F 
Sbjct: 194 TREGNDLYHEMIESKVNMDPKEHGSAEGSKCALVYGQMNEPPGARARVALTGLTVAEHFR 253

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+
Sbjct: 254 DEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGS 311

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+      
Sbjct: 312 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPTIL 371

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q      
Sbjct: 372 GEEHYNVARRVQQVLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP---FH 427

Query: 426 SEDVFQEITKKL 437
             +VF     KL
Sbjct: 428 VAEVFTGSPGKL 439


>gi|130076712|gb|ABO31976.1| ATPase alpha subunit [Sedum humifusum]
          Length = 378

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/381 (24%), Positives = 157/381 (41%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSDSETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +       +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGYVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             SL   + ++ E       G
Sbjct: 357 RGSLKLELAQYREVAAFAQFG 377


>gi|12659359|gb|AAG60214.1| ATPase alpha subunit [Ceratophyllum demersum]
          Length = 413

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG
Sbjct: 57  TGSILDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++   G N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSGANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVXG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 399


>gi|156530165|gb|ABU75179.1| AtpB [Pierreodendron africanum]
          Length = 498

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I I  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINITCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +    +    +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTILSILETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF    +  +L  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNERDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20146572|gb|AAM12440.1| ATP synthase alpha subunit [Fouquieria sp. Anderberg s.n.]
          Length = 399

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/406 (22%), Positives = 164/406 (40%), Gaps = 23/406 (5%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            + S+      V  + +     + V      S   G  + +  + V I   G    I  G
Sbjct: 2   RVVSVEDGIARVYGIERDSSW-EMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEG 57

Query: 85  DLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
           DLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +
Sbjct: 58  DLVKRTGSIVDVPAGRAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHE 116

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVII 192
             +TG++ +D   P+  GQR  +      GK+ +      +                 + 
Sbjct: 117 PMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVY 176

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G +
Sbjct: 177 VAIGQKRSTVAQLVQILSKANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMH 236

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
            L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA
Sbjct: 237 ALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTA 296

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     
Sbjct: 297 LPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAM 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           K++  S    + ++ E   +  +G     +D      ++    + +
Sbjct: 357 KQVCGSSKLELAQYREGAALAQLG---SNLDAATQALLNTGARLTE 399


>gi|238060778|ref|ZP_04605487.1| F0F1 ATP synthase subunit alpha [Micromonospora sp. ATCC 39149]
 gi|237882589|gb|EEP71417.1| F0F1 ATP synthase subunit alpha [Micromonospora sp. ATCC 39149]
          Length = 546

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 94/429 (21%), Positives = 176/429 (41%), Gaps = 23/429 (5%)

Query: 7   TLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            L +    YS ++  +  G ++        V  L       + +  +      LG  + +
Sbjct: 14  ALERYVSSYSPDVSREEVGTVADTGDGIAHVEGL-PSTMTNELLEFEDG---TLGVALNL 69

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           ++  + +  +G   ++  G  V   GR   +     + GRV+NALG+PIDG   +   + 
Sbjct: 70  DVREIGVVVLGDSAKLEEGQRVKRTGRVLSVPVGDAFLGRVVNALGQPIDGLGDI-ANEG 128

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLS 179
             E+  + P  M RQ V++  +TGI+ +D  TP+  GQR  +      GK      T+L+
Sbjct: 129 FRELELQAPNVMARQSVDEPLQTGIKAVDAMTPIGRGQRQLIIGDRKTGKTTVALDTILN 188

Query: 180 MFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
                   D     + I   +G++   +               + +V + + +    + +
Sbjct: 189 QRDNWRSGDPKKQVRCIYVAIGQKASTIASIKGILEDAGAMEYTTIVASPASDPAGFKYL 248

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T  +I +++   G +VL++ D +++ A + R ++      P    YP  VF    RL
Sbjct: 249 APYTGSSIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRL 308

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER          G++T +  +    ++ +  I  +V SI DG I L   L  +G  P +
Sbjct: 309 LERCAKLSDALGGGSMTGLPIIETKANDISAFIPTNVISITDGQIFLETDLFNQGVRPAI 368

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  SL   + ++ E         +   +D      + +  
Sbjct: 369 NVGTSVSRVGGAAQVKPMKKVAGSLRLNLAQYRELE---AFAAFASDLDKASRAQLERGS 425

Query: 412 IIYDFLKQS 420
            + + LKQ 
Sbjct: 426 RLVELLKQP 434


>gi|189017738|gb|ACD71538.1| F1-ATPase alpha subunit [Tacca artocarpifolia]
          Length = 401

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/394 (22%), Positives = 159/394 (40%), Gaps = 22/394 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           +  G+ V      S   G  + +  + V I   G    I  GDLV   G     P     
Sbjct: 6   IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAI 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  G
Sbjct: 63  LGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYL 210
           QR  +      GK+ +      +                 +   +G++   V + ++   
Sbjct: 122 QRELIIGDRQTGKTAIAIDTILNQKEIHSRGTSESETLYCVYVAIGQKRSTVAQLVQILP 181

Query: 211 GDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
             N  + S++V AT+ +   L+ +AP +   + EYF     + L+I D +++ A + R++
Sbjct: 182 EANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNNMHALIIYDDLSKQAVAYRQM 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADS 327
           +      P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +
Sbjct: 242 SLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTN 301

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           V  I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E  
Sbjct: 302 VIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE-- 359

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +     +   +D      +++   + +  KQ  
Sbjct: 360 -VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 392


>gi|34539229|gb|AAQ74498.1| F1-ATPase alpha subunit [Calamus caryotoides]
          Length = 417

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEXVXFA---SGVKGXALXLENENVXIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  M R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIMERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|54294644|ref|YP_127059.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Lens]
 gi|53754476|emb|CAH15960.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str.
           Lens]
          Length = 449

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 159/429 (37%), Positives = 244/429 (56%), Gaps = 6/429 (1%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLG 60
           Q  L  +     +   + ++  G IS    +       +Q   +G   + +         
Sbjct: 5   QTQLHKILSGTRNKHHSGLLHCGRISRAIGLTIEAKGFNQP--IGARCLVKINDEHSVQA 62

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + + VY+  +G  + I+ G  +   GR  +++      GR++N  G  ID D   
Sbjct: 63  EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVNVGHQLLGRILNGSGMFID-DGPP 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G+   +  ++ +V   + R  +E     GIR I+    +  GQRIG+FAGSG+GKS LL 
Sbjct: 122 GEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 181

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D V++ L+GERGREV+EFIE  LG + LK++VVV A +DESP++R      A
Sbjct: 182 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLKRAVVVAAPADESPLMRLHGAKVA 241

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G
Sbjct: 242 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D  AS+S
Sbjct: 302 NGTAGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 361

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S    K +      +  +E+ +D+ L+G Y  G D ++DKA+  V  + D+L 
Sbjct: 362 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 421

Query: 419 QSPSDLSSE 427
           Q   +  S 
Sbjct: 422 QGMDEQVSY 430


>gi|307131592|ref|YP_003883608.1| flagellum-specific ATP synthase fliI [Dickeya dadantii 3937]
 gi|306529121|gb|ADM99051.1| Flagellum-specific ATP synthase fliI [Dickeya dadantii 3937]
          Length = 456

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 159/455 (34%), Positives = 244/455 (53%), Gaps = 25/455 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M   L       + + K +     + + G ++  T +    T L  ++ LG   + + + 
Sbjct: 1   MTVRLSRWLSSIDAFEKRIANTPAIRRYGRLTRATGLVLEATGL--HMPLGSTCLIERQT 58

Query: 56  SDNL----GQVIRINLDIVYICPVGIGEEISLGDLVF--------HWGRFRISPSACWCG 103
            + +     +V+  N   +++ P+   E I  G  V+          G+ ++       G
Sbjct: 59  GNQVDEVESEVVGFNGQKLFLMPLEEVEGIIPGARVYERVGLSGSSQGK-QLPLGPALLG 117

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV++   KP+DG  +   G  +  +++     + R  +E     G+R I+    +  GQR
Sbjct: 118 RVLDGSAKPLDGFPAPDTG-YTAPLVTAPFNPLQRTPIEHVLDVGVRAINALLTVGRGQR 176

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222
           +G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVV+ A
Sbjct: 177 MGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSVVIAA 236

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GY
Sbjct: 237 PADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R L
Sbjct: 297 PPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQL 356

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR        +    V      +  ++  RD+  +G Y  G D +
Sbjct: 357 AESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAGSDPL 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           LD+A+   P +  FL+Q   + SS   F+E  + L
Sbjct: 417 LDRAIQLYPQMQHFLQQGMFERSS---FEEACQAL 448


>gi|186886319|gb|ACC93562.1| ATPase F1 alpha subunit [Juncus conglomeratus]
          Length = 368

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 355 FAQFGSDLDAATQ 367


>gi|296135694|ref|YP_003642936.1| flagellar protein export ATPase FliI [Thiomonas intermedia K12]
 gi|295795816|gb|ADG30606.1| flagellar protein export ATPase FliI [Thiomonas intermedia K12]
          Length = 448

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 155/423 (36%), Positives = 241/423 (56%), Gaps = 6/423 (1%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQ 61
           ++L+TL    +      +V  G +  +  +      L     LG+      + +  +  +
Sbjct: 8   RHLQTLQLRLQSGGPLPLVYSGSLVRVRGLILEAQGLE--ASLGERCRISTEQNRVIDAE 65

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLG 120
           V+  N D V +  +G  + ++ G  V    G  RI       GRV++  G+P+DGD +L 
Sbjct: 66  VVGFNGDHVQLMALGEVQGLTPGARVHPVPGDIRIPVGPELLGRVLDGNGRPLDGDGALL 125

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
               +     ++ P + R  V +    G+R I+    +  G R+G+FAGSG+GKS LL M
Sbjct: 126 ASHYTTLSTQQINP-LGRALVRQPLDVGVRAINALFTVGRGARMGLFAGSGVGKSVLLGM 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR+   D +++ L+GERGREV+EFIED LG +   ++VVV A +D   + R      A 
Sbjct: 185 MARNTNADVIVVGLIGERGREVKEFIEDILGVEGRSRAVVVAAPADAPALTRIRGARLAT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEY+  +G NVLL++DS+TR+A ++RE+A  +GE P ARG+P SVF++LP L+ER G 
Sbjct: 245 AMAEYYRDQGLNVLLLMDSVTRYALALREVALAAGEPPAARGFPPSVFAKLPALVERAGN 304

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
             +  G+ITA  +VL++GD+  DP+AD+VR+ILDGHIVL+R LAE+G +P +D  AS+SR
Sbjct: 305 GPEGGGSITAFYTVLMEGDDQQDPVADNVRAILDGHIVLSRRLAEQGHFPAIDLQASISR 364

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     +  E + +  L  +  R+   +D+  +G Y PG DL LD+AV     I +FL Q
Sbjct: 365 VMPAIATPLELRRMQKLKEMQSRYASQQDLIAVGAYTPGADLQLDQAVLAHVGIREFLIQ 424

Query: 420 SPS 422
              
Sbjct: 425 DMH 427


>gi|51103157|gb|AAT96299.1| HrcN [Pseudomonas viridiflava]
          Length = 451

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 152/440 (34%), Positives = 229/440 (52%), Gaps = 16/440 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGK 54
           M   L  L    +  S+ L     V   G I+ +  +            +GD   + +  
Sbjct: 1   MDAALARLESWRQAQSERLSHCAPVQIRGRIAGVNGILL--NSYMPRARIGDLCEISRAD 58

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
            S+ + +++  +     +  +G  + I++G  V        +       G V++  G+ +
Sbjct: 59  GSEVMAEIVGFDRQHTLLAALGPLDGIAIGAPVRPLFQPHSLVVGEFLLGAVLDGFGRSL 118

Query: 114 DGDDS----LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
            GD      L     +  ++   PPA  R R++    TG+R ID    L  GQR+G+FAG
Sbjct: 119 SGDGPSAFALSGAVGAQPVIRDAPPATERPRIDTPLSTGLRSIDGLLTLGEGQRVGIFAG 178

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESP 228
           +G GK+TLL+  AR+   + ++  L+GERGRE+REF+  +   +  +++V+V +TSD S 
Sbjct: 179 AGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRTVLVCSTSDRSS 238

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A  TA  IAE F  +G + LLI+DS+TRFA + REI   SGE     G P SV+S
Sbjct: 239 MERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGEPAGRGGLPPSVYS 298

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRL+ER G        ITA+ SVL++ D+ NDPIAD VRS+LDGHIVL+R LAE G Y
Sbjct: 299 LLPRLVERAGR--THDAAITALYSVLIEQDSMNDPIADEVRSLLDGHIVLSRKLAERGHY 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P VD L S+SR        ++    + +  L+  +++   +  +G Y+PG D + D AV 
Sbjct: 357 PAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQPGNDPLTDFAVQ 416

Query: 409 QVPIIYDFLKQSPSDLSSED 428
               I  FL+QS  D  S D
Sbjct: 417 SRDRIMGFLQQSLRDPVSLD 436


>gi|269965406|ref|ZP_06179526.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
 gi|269830052|gb|EEZ84281.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B]
          Length = 448

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 152/438 (34%), Positives = 247/438 (56%), Gaps = 8/438 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L++ LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSEALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
                I Y+ P+     +  G  V    G   +  S+ W GRV+N LG+P+D    L  G
Sbjct: 70  GFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVLNGLGEPLDDGAPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 E-RVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREFI  +   +  KK++++ A +DESP++R  A L    +
Sbjct: 189 KNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           +EYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 249 SEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NQYGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +         + ++   +   + + +++  +GGY+PG D  LD++V   P +  +L+Q+ 
Sbjct: 369 NTCTQDAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAYLQQAA 428

Query: 422 SD-LSSEDVFQEITKKLQ 438
           ++ +       E+ +  Q
Sbjct: 429 NESVDYPTSLTELAQLFQ 446


>gi|218549266|ref|YP_002383057.1| flagellum-specific ATP synthase [Escherichia fergusonii ATCC 35469]
 gi|218356807|emb|CAQ89435.1| flagellum-specific ATP synthase [Escherichia fergusonii ATCC 35469]
          Length = 457

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 161/441 (36%), Positives = 241/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +      +   +V+  N 
Sbjct: 18  AKMAQLPTVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQEGTETREVESEVVGFNG 75

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 76  QRLFLMPLEEVEGVLPGARVYAKNISGDGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 134

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 135 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 193

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 194 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 253

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 254 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 313

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 314 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 373

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL
Sbjct: 374 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGFL 433

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +S E+  Q + +  
Sbjct: 434 QQGIFERASWEESLQGLERIF 454


>gi|149925408|ref|ZP_01913672.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105]
 gi|149825525|gb|EDM84733.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105]
          Length = 463

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 115/405 (28%), Positives = 187/405 (46%), Gaps = 11/405 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           +G  +  I +V       +    + D +  +G       Q  ++   +V    +G  + +
Sbjct: 7   EGKIVQCIGAVIDVEFSRNNMPKVYDALTMEGSELTLEVQ-QQLGDGVVRTICLGASDGL 65

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V + G+   +       GR+++ LG+PID    +   D +  I    P       
Sbjct: 66  RRGMAVHNTGKPISVPVGQGTLGRIMDVLGRPIDEAGPV-TTDATRAIHQNAPAFDELSP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VGE
Sbjct: 125 STELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHGGYSVFAGVGE 184

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  +G +VLL +
Sbjct: 185 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFV 244

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++  E+ RL ERI  +  +KG+IT+V +V V 
Sbjct: 245 DNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKKGSITSVQAVYVP 302

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +   
Sbjct: 303 ADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQVDPNIIGEEHYNVARG 362

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + R++E RDI  I G           AV +   I  FL Q 
Sbjct: 363 VQQTLQRYKELRDIIAILGMDELS-PEDKLAVARARKIQRFLSQP 406


>gi|28868608|ref|NP_791227.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213968259|ref|ZP_03396403.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato T1]
 gi|301381812|ref|ZP_07230230.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062003|ref|ZP_07253544.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato K40]
 gi|302135085|ref|ZP_07261075.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|34098490|sp|Q887B5|HRCN_PSESM RecName: Full=Type III secretion ATP synthase HrcN
 gi|28851846|gb|AAO54922.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213926897|gb|EEB60448.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. tomato T1]
 gi|331015098|gb|EGH95154.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 449

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 158/445 (35%), Positives = 234/445 (52%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
             L Q  + ++  L     V   G +S++  +     C      +GD   V +   S  L
Sbjct: 3   AALNQWKDTHAARLSQYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLL 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGD 116
            +++    +   +  +G  + I +G  +   G   RI       G V++  G+P+  D  
Sbjct: 61  AEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCL 120

Query: 117 DSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    D       +++   P   R R+ +   TGIR ID    L  GQR+G+FAG+G G
Sbjct: 121 GAFAGPDDRRDTLPVIADALPPTQRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCG 180

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           K+TL++  AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R 
Sbjct: 181 KTTLMAELARNMDCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERA 240

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPR
Sbjct: 241 RAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPR 300

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G SE   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D
Sbjct: 301 LVERAGMSEN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+       D ++  + L  L+  +++   +  +G Y+ G D + D AV     
Sbjct: 359 VSASISRILSNVTGRDHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDA 418

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+Q   DL      QE    L
Sbjct: 419 INAFLRQ---DLREPVPLQETLDGL 440


>gi|238577792|gb|ACR46703.1| HrcN [Pseudomonas syringae pv. tabaci]
          Length = 450

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 155/437 (35%), Positives = 230/437 (52%), Gaps = 15/437 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINL 67
           A  A     + V   G +S++  +     C      +GD   V +   S  L +++    
Sbjct: 12  AHAARLRDYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQ 69

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDL 124
           +   +  +G  + I +G  +   G   RI       G V++  G+P+  D   +    D 
Sbjct: 70  ECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGQDD 129

Query: 125 SM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +++   P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  
Sbjct: 130 RRETLPVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAEL 189

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R  A  TA  
Sbjct: 190 ARNMGCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATA 249

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G S
Sbjct: 250 IAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMS 309

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+
Sbjct: 310 EN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRI 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + ++  + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q 
Sbjct: 368 LSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ- 426

Query: 421 PSDLSSEDVFQEITKKL 437
             DL      QE    L
Sbjct: 427 --DLREPVPLQETLDGL 441


>gi|119471629|ref|ZP_01614014.1| F0F1 ATP synthase subunit alpha [Alteromonadales bacterium TW-7]
 gi|119445408|gb|EAW26695.1| F0F1 ATP synthase subunit alpha [Alteromonadales bacterium TW-7]
          Length = 513

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 189/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +   V       G I S+T     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIEKFEVVSEARNEGTIVSVTDGIIRIHGLAD-CMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D +    +G   +++ G  V+  GR   +   A   GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGAGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   D    +    P  + RQ V++  +TG + ID   P+  GQR  V      GK
Sbjct: 117 GKGALD-NDGFEPVEKIAPGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDTGVKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPFSGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVEKFTNGEVKGQTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|291333876|gb|ADD93557.1| F0F1 ATP synthase subunit beta [uncultured marine bacterium
           MedDCM-OCT-S04-C293]
          Length = 459

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 20/411 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V    Q +  + D +  +G+     G V+     +   IV    +
Sbjct: 1   MSQGTVVQVIGAVIDVEFSRQELPKIYDALEVEGE-----GLVLEVQQQLGDGIVRTIAM 55

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  E +  G  V + G   ++       GR++N LG+PIDG   +G  +  M I    P 
Sbjct: 56  GQTEGLQRGAKVSNTGGAVKVPVGEKTLGRILNVLGEPIDGKGDVGAEEQ-MPIHRAPPS 114

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVI 191
             ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+  ++     +
Sbjct: 115 YEDQAESSEILETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAYETSGYSV 174

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    L+ +TIAE F  +G 
Sbjct: 175 FAGVGERTREGNDFYLEMTESQVLDKVALVYGQMNEPPGCRMRVALSGLTIAEKFRDEGK 234

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E ++  G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 235 DVLLFVDNIYRYTLAGVECSSLLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 292

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D A    + 
Sbjct: 293 QAIYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPAIVGQEH 352

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R+ E +DI  I G     D    + V++   I  +L Q 
Sbjct: 353 YDVAKGVQQVLQRYLELKDIIAILGMDELSDED-KQTVNRARRIEKYLSQP 402


>gi|297544153|ref|YP_003676455.1| ATP synthase F1 subunit beta [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841928|gb|ADH60444.1| ATP synthase F1, beta subunit [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 461

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 118/405 (29%), Positives = 190/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           GYI+ +      +    +   + + +     + + + +V +   D  V    +   + + 
Sbjct: 4   GYITQVIGPVVDIKFEGELPPINNAIKIPMGDRELIVEVSQHVGDNIVRCIAMAPTDGLQ 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR+ N LG+PID    +      M I  K PP   +   
Sbjct: 64  RGMECIDTGNTIMVPVGKGTLGRMFNVLGQPIDELGEVNDVKY-MSIHRKAPPFEEQSPA 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +    S+   VGER
Sbjct: 123 TEILETGIKVIDLLTPYPKGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGER 182

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  E   +     +  K+  V    +E P  R    L  +T+AEYF  +   +VLL +
Sbjct: 183 SREGNELWHEMQESGVLDKAAFVFGQMNEPPGARMRVALAGLTMAEYFRDEEHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +  +KG+IT+V +V V 
Sbjct: 243 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +     +E   +   
Sbjct: 301 ADDLTDPAPATTFTHLDATTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYSVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V++   I  FL Q 
Sbjct: 361 VQEILERYKELQDIIAILGMEELTDED-KLIVYRARKIQRFLSQP 404


>gi|89899964|ref|YP_522435.1| F0F1 ATP synthase subunit alpha [Rhodoferax ferrireducens T118]
 gi|119367950|sp|Q21Z99|ATPA2_RHOFD RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|89344701|gb|ABD68904.1| ATP synthase F1, alpha subunit [Rhodoferax ferrireducens T118]
          Length = 534

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 115/431 (26%), Positives = 181/431 (41%), Gaps = 15/431 (3%)

Query: 3   KNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           K    + +  E ++ +L   + G I+SI +    V+ L   V   + V   G   D  G 
Sbjct: 13  KAFAGMREAREAFAPSLAPREVGTITSIATGIAKVSGL-PGVGFDELVKFPG---DLFGI 68

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              ++   + +  +G    +  GD V   GR           GRVI+ LG+P+DG   + 
Sbjct: 69  AFNVDEAEIGVVLLGEYWHLHAGDEVDRTGRVMDVAVGDGLLGRVIDPLGRPLDGRGPVA 128

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                + I     P M+R  V    +TG++VID   P+  GQR  +      GK+ +   
Sbjct: 129 SS-HRLPIERPASPIMDRAPVTVPLQTGLKVIDALIPVGRGQRELILGDRQTGKTAIAID 187

Query: 181 FARSDCFDKV--IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLT 237
              +     V  +   +G+R   V + +           + VVV   ++ P L  +AP  
Sbjct: 188 TILNQQGQNVLCVYCAIGQRASAVAKVVATLREKGAMDFTTVVVTEGNDPPGLAYIAPYA 247

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAE+F   G +VL++ D +T+ A + RE++      P    +P  +F    RLLER 
Sbjct: 248 ATSIAEHFMEAGRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERA 307

Query: 298 G--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                E+  G++TA+  +     N +  I  ++ SI DG I L+ SL E G  P VD   
Sbjct: 308 THLRQERGGGSLTALPIIETQAQNISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGK 367

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  KA     + +   L     +FEE       G     +D    K +     I  
Sbjct: 368 SVSRVGGKAQRTAYRAVAGDLKLAYAQFEELETFARFG---ARLDENTTKIIEHGRRIRA 424

Query: 416 FLKQSPSDLSS 426
            LKQ  S   S
Sbjct: 425 CLKQPESAPVS 435


>gi|12659383|gb|AAG60226.1| ATPase alpha subunit [Schisandra henryi]
          Length = 404

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG
Sbjct: 57  TGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +  +  +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|222356626|gb|ACM48843.1| ATPase alpha subunit [Aletris lutea]
          Length = 369

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 156/371 (42%), Gaps = 19/371 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIXRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQMNSRGTSESDTLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 240 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D    
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQ 356

Query: 405 KAVHQVPIIYD 415
              ++   + +
Sbjct: 357 ALPNRGARLTE 367


>gi|6561690|gb|AAF17034.1|AF197702_1 ATPase alpha subunit [Cryptocarya meisneriana]
          Length = 413

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 167/407 (41%), Gaps = 23/407 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGISESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 LELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 399


>gi|86134707|ref|ZP_01053289.1| ATP synthase F1, alpha subunit [Polaribacter sp. MED152]
 gi|85821570|gb|EAQ42717.1| ATP synthase F1, alpha subunit [Polaribacter sp. MED152]
          Length = 525

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 102/450 (22%), Positives = 168/450 (37%), Gaps = 37/450 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL    ++  + + G +  +      V  LS  V  G+ V  +       G V+ +  D
Sbjct: 15  EQLTNFEAQASLSEVGTVLQVGDGIARVYGLS-NVQYGELVEFENG---LEGIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              +  +G    +  G  V    R   +       GRV++ LG PIDG   +      M 
Sbjct: 71  NAGVVLLGASTSVREGSTVKRTERIASLRAGEGIVGRVVDTLGSPIDGKGPIEGTTYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  + P  + R+ V +  +TGI+ ID   P+  GQR  +      GKST+      +   
Sbjct: 131 LERRAPGVIYREPVTEPLQTGIKSIDAMIPVGRGQRELIIGDRQTGKSTVALDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V               + +V A + +   ++  AP    
Sbjct: 191 FYDAGNPVYCIYVAIGQKASTVAAIANMLEERGALAYTTIVAANASDPAAMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + REI+      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 311 VINDNVIASEMNDLPDSLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLD 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +
Sbjct: 371 GDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAQFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSD-LSSED 428
           D      + +     + LKQ+ +D  + ED
Sbjct: 428 DAATMSVISKGQRNVEILKQAQNDPFTVED 457


>gi|162447838|ref|YP_001620970.1| F-type H+-transporting ATPase subunit alpha [Acholeplasma laidlawii
           PG-8A]
 gi|190358224|sp|A9NGW4|ATPA_ACHLI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|161985945|gb|ABX81594.1| F-type H+-transporting ATPase alpha chain [Acholeplasma laidlawii
           PG-8A]
          Length = 501

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 183/426 (42%), Gaps = 15/426 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  EDY  ++ ++  G + S+     TV  LSQ + LG+ V       D  G V  
Sbjct: 11  ALIQKQIEDYKADVRLESIGKVLSVADGIATVYGLSQAI-LGELVELP---HDVKGLVFN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V I   G  + I  GD V    +   +       GRV++ LG P+D   ++   D
Sbjct: 67  LEQFHVGIILFGRTDLIKEGDNVRATKKIFEVPVGEDLLGRVVDPLGNPLDLKGTIN-AD 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I       M+R  + +   TGI+VID   P+  GQR  +      GKST+      
Sbjct: 126 AYYPIERPAKDLMHRGFINEPLHTGIKVIDALVPIGKGQRELIIGDRQTGKSTIAIDTII 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   +   ++     D L  +V++ A + +   L  +AP T  +
Sbjct: 186 NQRGKNVICVYVAIGQKDSTIANLVKLLQIKDALDYTVIINAGASKEATLLYIAPYTGSS 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G +VL+I D +++ A + RE++           YP  +F    RLLER G  
Sbjct: 246 IAEYFMEQGKDVLIIYDDLSKHAVAYRELSLLMKRPSGREAYPGDIFYLHSRLLERAGKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            KE   G+ITA+  V     + +  I  ++ SI DG + L + L  +G  P ++   SVS
Sbjct: 306 SKEHGGGSITALPIVETQAGDISAYIPTNIISITDGQLYLEQKLFYQGVRPAINAGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++  +L   +  F E       G     +D    + + +     + LK
Sbjct: 366 RVGGSAQWKAMKQVAGTLRISLANFRELESFAQFG---SDLDPSSKRRLDRGRKTVEILK 422

Query: 419 QSPSDL 424
           Q   +L
Sbjct: 423 QDVHEL 428


>gi|172064918|ref|YP_001815630.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
 gi|171997160|gb|ACB68077.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
          Length = 463

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 162/424 (38%), Positives = 235/424 (55%), Gaps = 9/424 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRIN 66
           A   E  ++      G +  +      V+ L     LG+    +      L   +V+  +
Sbjct: 33  AMERELRARAQPAACGKVQEVIGTLVRVSGLD--ATLGELCELRSPEGALLQRAEVVGFS 90

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D+  + P G    +S    V    R   +       GRVI++LG+PIDG   L + D  
Sbjct: 91  RDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPRLLGRVIDSLGEPIDGKGPL-ECDEW 149

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+ MFAR  
Sbjct: 150 QPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLMGMFARGA 209

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREF E  LG D + +SVVV ATSD S I R  A   A  +AEY
Sbjct: 210 RCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAYAATAVAEY 269

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER G S    
Sbjct: 270 FRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLERAGRSAL-- 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL + ++  DPIA+ VR ILDGH++L+R +A + RYP +D L S+SR+  + 
Sbjct: 328 GSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGSLSRVMTQV 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I DFL Q    L
Sbjct: 388 VSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRDFLGQPTDLL 447

Query: 425 SSED 428
              D
Sbjct: 448 VDPD 451


>gi|34539375|gb|AAQ74571.1| F1-ATPase alpha subunit [Muscari neglectum]
          Length = 376

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/377 (24%), Positives = 161/377 (42%), Gaps = 17/377 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 4   SGVKGIALNLENENVXIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 63

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 64  GKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 122

Query: 175 -----STLLSMFARSDCFD----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
                 T+L+    +DC +      +   +G++   V + ++     N  + S++V AT+
Sbjct: 123 TAIAIDTILNQKQLNDCSESKKLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATA 182

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 183 SDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 242

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L
Sbjct: 243 DVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETEL 302

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 303 FYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAA 359

Query: 403 LDKAVHQVPIIYDFLKQ 419
                ++   + +  KQ
Sbjct: 360 TQALPNRGARLTEVPKQ 376


>gi|330872913|gb|EGH07062.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 449

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 157/445 (35%), Positives = 234/445 (52%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
             L Q  + ++  L     V   G +S++  +     C      +GD   V +   S  L
Sbjct: 3   AALNQWKDTHAARLSQYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLL 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGD 116
            +++    +   +  +G  + I +G  +   G   RI       G V++  G+P+  D  
Sbjct: 61  AEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCL 120

Query: 117 DSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    D       +++   P   R R+ +   TGIR ID    L  GQR+G+FAG+G G
Sbjct: 121 GAFAGPDDRRDTLPVIADALPPTQRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCG 180

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           K+TL++  AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R 
Sbjct: 181 KTTLMAELARNMDCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERA 240

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPR
Sbjct: 241 RAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPR 300

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G SE   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D
Sbjct: 301 LVERAGMSEN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+       + ++  + L  L+  +++   +  +G Y+ G D + D AV     
Sbjct: 359 VSASISRILSNVTGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDA 418

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+Q   DL      QE    L
Sbjct: 419 INAFLRQ---DLREPVPLQETLDGL 440


>gi|189017708|gb|ACD71523.1| F1-ATPase alpha subunit [Dioscorea prazeri]
          Length = 401

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 159/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSQSETLYCVYVAIGQKRSTVAQLVQILPEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 305 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 362 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 392


>gi|34539467|gb|AAQ74617.1| F1-ATPase alpha subunit [Trithrinax acanthocoma]
          Length = 391

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 90/399 (22%), Positives = 162/399 (40%), Gaps = 23/399 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
             S    + ++ E   +     +   +D      +++  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGA 391


>gi|115360594|ref|YP_777731.1| type III secretion system ATPase [Burkholderia ambifaria AMMD]
 gi|115285922|gb|ABI91397.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria AMMD]
          Length = 463

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 162/424 (38%), Positives = 234/424 (55%), Gaps = 9/424 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRIN 66
           A   E  ++      G +  +      V+ L     LG+    +      L   +V+  +
Sbjct: 33  AMERELRARAQPAACGKVQEVIGTLVRVSGLD--ATLGELCELRSPEGALLQRAEVVGFS 90

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D+  + P G    +S    V    R   +       GRVI++LG+PIDG   L + D  
Sbjct: 91  RDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPRLLGRVIDSLGEPIDGKGPL-ECDEW 149

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+ MFAR  
Sbjct: 150 QPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLMGMFARGA 209

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREF E  LG D + +SVVV ATSD S I R  A   A  +AEY
Sbjct: 210 RCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAYAATAVAEY 269

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER G S    
Sbjct: 270 FRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLERAGRSAL-- 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL + +   DPIA+ VR ILDGH++L+R +A + RYP +D L S+SR+  + 
Sbjct: 328 GSITALYTVLAEDETGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGSLSRVMTQV 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            S +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I DFL Q    L
Sbjct: 388 VSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRDFLGQPTDLL 447

Query: 425 SSED 428
              D
Sbjct: 448 VDPD 451


>gi|189017710|gb|ACD71524.1| F1-ATPase alpha subunit [Dioscorea rockii]
          Length = 401

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 158/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSQSETLYCVYVAIGQKRSTVAQLVQILPEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 305 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 362 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 392


>gi|6561644|gb|AAF16988.1|AF197656_1 ATPase alpha subunit [Meliosma squamulata]
          Length = 409

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/402 (22%), Positives = 166/402 (41%), Gaps = 23/402 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 LAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 394


>gi|83649673|ref|YP_438108.1| F0F1 ATP synthase subunit beta [Hahella chejuensis KCTC 2396]
 gi|118573541|sp|Q2S6P1|ATPB_HAHCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|83637716|gb|ABC33683.1| ATP synthase F1, beta subunit [Hahella chejuensis KCTC 2396]
          Length = 459

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 187/407 (45%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +G  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGQIVQIIGAVIDVEFPRDTVPKVYDALKVEGGATTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +      +       GR+++ LG PID    +G+ +  M I    P   ++
Sbjct: 60  GLRRGLQVENTNAPISVPVGTQTLGRIMDVLGNPIDEKGPIGEEE-RMPIHRTAPGYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 SSSRDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYYEMEESKVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKVGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  S LD  +VL+R +A +G YP +DPL S SR  D      +   + 
Sbjct: 297 VPADDLTDPSPATTFSHLDATVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGQEHYDVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQTVLQRYKELKDIIAILGMDELSEED-KQIVSRARKIERFLSQP 402


>gi|254253720|ref|ZP_04947037.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
 gi|124898365|gb|EAY70208.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
          Length = 463

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 159/418 (38%), Positives = 232/418 (55%), Gaps = 9/418 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRIN 66
           A   E  ++      G +  +      V+ L     LG+    +      L   +V+  +
Sbjct: 33  AMERELRARAQPAACGKVQEVIGTLVRVSGLD--ATLGELCELRSPEGALLQRAEVVGFS 90

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D+  + P G    +S    V    R   +       GRVI++LG+PIDG   L + D  
Sbjct: 91  RDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPRLLGRVIDSLGEPIDGKGPL-ECDEW 149

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+ MFAR  
Sbjct: 150 QPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLMGMFARGA 209

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREF E  LG D + +SVVV ATSD S I R  A   A  +AEY
Sbjct: 210 RCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAYAATAVAEY 269

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER G SE   
Sbjct: 270 FRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLERAGRSE--H 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL + ++  DPIA+ VR ILDGH++L+R +A + RYP +D L S+SR+  + 
Sbjct: 328 GSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGSLSRVMTQV 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I  FL Q   
Sbjct: 388 VPREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRAFLGQPTD 445


>gi|156530195|gb|ABU75194.1| AtpB [Simaba guianensis]
          Length = 498

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|161520296|ref|YP_001583723.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans ATCC 17616]
 gi|189353525|ref|YP_001949152.1| ATP synthase in type III secretion protein SctN [Burkholderia
           multivorans ATCC 17616]
 gi|160344346|gb|ABX17431.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans ATCC 17616]
 gi|189337547|dbj|BAG46616.1| ATP synthase in type III secretion protein SctN [Burkholderia
           multivorans ATCC 17616]
          Length = 462

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 160/421 (38%), Positives = 224/421 (53%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 42  VSVQGRVNHAVGQILNATGI--RAKLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 99

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 100 AGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGATWVSTQQDPPNPLA 158

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 159 RRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 218

Query: 198 RGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE     +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 219 RGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 278

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G      G+ITA+ +VLV+
Sbjct: 279 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAGQGAT--GSITALYTVLVE 336

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 337 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQAAARV 396

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 397 RELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAFCAQAQHEDVRFDALLAKLTK 456

Query: 437 L 437
           L
Sbjct: 457 L 457


>gi|319948459|ref|ZP_08022595.1| F0F1 ATP synthase subunit alpha [Dietzia cinnamea P4]
 gi|319437879|gb|EFV92863.1| F0F1 ATP synthase subunit alpha [Dietzia cinnamea P4]
          Length = 546

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 187/448 (41%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +     +Y+  +       + G +   +     ++ L       + +   G     LG
Sbjct: 9   DEIRSAIANYTSTVSTDATKEEVGVVVDTSDGIAHISGL-PSAMANELLEFPGG---ILG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + +    +    +G  EEI+ G  V   G    +     + GRV+N LG+PIDG   +
Sbjct: 65  VALNLEDREIGAVILGNFEEIAQGQEVRRTGDVLSVPVGDGFLGRVVNPLGQPIDGLGDI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            + + +  +  + P  + RQ VE+  +TGI+ ID  TP+  GQR  +      GK     
Sbjct: 125 -ESEDTRALELQAPSVLERQPVEEPMQTGIKAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
             +L+  A  +  DK      I   VG++G  +               + +V A + +S 
Sbjct: 184 DAILNQKANWESGDKTKQLRCIYVAVGQKGSTIAGVKATLEEHGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G++VL++ D +++ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPFTGSAIGQHWMYQGNHVLVVFDDLSKQADAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +    ++ +  I  +V SI DG + L   L   G
Sbjct: 304 LHSRLLERCAKLSDEMGGGSLTGLPIIETKANDVSAFIPTNVISITDGQVFLESDLFNRG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   KK+  SL   +  +   RD+     +   +D      
Sbjct: 364 VRPAVNVGISVSRVGGAAQTKGMKKVSGSLRLDLAAY---RDLESFATFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           + +   + + LKQ   S ++ ED    I
Sbjct: 421 LERGQRLVEILKQDQSSPVAVEDQIVSI 448


>gi|332669193|ref|YP_004452201.1| FliI/YscN family ATPase [Cellulomonas fimi ATCC 484]
 gi|332338231|gb|AEE44814.1| ATPase, FliI/YscN family [Cellulomonas fimi ATCC 484]
          Length = 444

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 156/420 (37%), Positives = 237/420 (56%), Gaps = 11/420 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++     T+  +     +G+ V       D L +V+          P+G    +
Sbjct: 27  RVGTVRAVVG--LTIEVVGTGAAVGELVRV---GDDVLAEVVATAGATARCMPLGPTSGL 81

Query: 82  SLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G          R+       GRV++ LG+PIDG   L +    + + S+ P  + R R
Sbjct: 82  RAGMPARPLREPLRVPVGPGLLGRVLDGLGRPIDGKGPL-RARAWVPLDSRAPHPLERAR 140

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V++    G+RV+D    +  GQR+G+FAGSG+GKS+LLSM AR    +  +I+LVGERGR
Sbjct: 141 VDEPLDLGVRVLDTLVTVGRGQRLGLFAGSGVGKSSLLSMVARGTDAEVSVIALVGERGR 200

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+ED LG + L +SVVV+ATSDE P++R  +   A  IAE    +G + +L++DS+
Sbjct: 201 EVREFLEDDLGPEGLARSVVVIATSDEPPLVRLRSAFLATRIAEALRDEGRHAVLMMDSL 260

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR A + REI  + GE P  RGYP S F+ L +LLER G      G++T + +VLVDGD+
Sbjct: 261 TRVAMAQREIGLSVGEPPATRGYPPSTFALLAQLLERAGTGAT--GSVTGLYTVLVDGDD 318

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HN+PIAD+ RSILDGH+VL+R LA  G +P VD L S+SR+A +  + +++     L  +
Sbjct: 319 HNEPIADAARSILDGHVVLDRRLAVAGHFPSVDALGSISRVASRVTTPEQRDAARRLRAV 378

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
           +    + +D+  +G Y  G + ++D AV     I  FL+Q   D + S   +  +   +Q
Sbjct: 379 MAARRQAQDLLDVGAYVAGSNPLVDAAVTHGRAIDAFLRQDIEDVVPSAQAWAHLAALVQ 438


>gi|238764048|ref|ZP_04625003.1| secretion system apparatus ATP synthase ssaN [Yersinia kristensenii
           ATCC 33638]
 gi|238697719|gb|EEP90481.1| secretion system apparatus ATP synthase ssaN [Yersinia kristensenii
           ATCC 33638]
          Length = 434

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 163/402 (40%), Positives = 221/402 (54%), Gaps = 10/402 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G I  +             V LG+       N   L +V+ I      + P     
Sbjct: 15  IESCGPILDVGPTLLRAHL--PGVALGELCQIASPN--RLAEVVAIEQQTALLSPFSSSF 70

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GRV++ LG P+D    L       E+    P  + R
Sbjct: 71  GLRCGQWVSPLGHAHRIRVGDDLAGRVLDGLGVPMDAGPPL--TGYWCELDCPPPDPLTR 128

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q V++   TGIR ID       GQR+G+FA +G+GKS+LLSM       D  +++L+GER
Sbjct: 129 QPVQQILTTGIRAIDGVLSCGEGQRMGIFAAAGVGKSSLLSMLCAGCAADITVLALIGER 188

Query: 199 GREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+E  L    + ++VVVVATSD   + R     TA T+AEYF  +G  VLL+ D
Sbjct: 189 GREVREFLEQVLTPQTRARTVVVVATSDRPALERLKGLYTATTVAEYFRERGLKVLLMAD 248

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR A + REI   +GE PV   +PTSVF+ LPRLLER G SE  +G+ITA  +VLV+G
Sbjct: 249 SLTRHARAAREIGLAAGEPPVMGSFPTSVFATLPRLLERAGNSE--RGSITAFYTVLVEG 306

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  S + + L   L 
Sbjct: 307 DDMNEPIADEVRSLLDGHIVLSRQLAGAGHYPAIDIAASVSRIMPQIVSVEHRALAQKLR 366

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           HL   ++E   +  +G Y+ G DL  D+A+ + P I  FL+Q
Sbjct: 367 HLQACYQEIELLVRVGEYQQGQDLQADEALQRYPAICAFLQQ 408


>gi|227114172|ref|ZP_03827828.1| type III secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 455

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 147/422 (34%), Positives = 232/422 (54%), Gaps = 13/422 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V + G + +++ +     C      +GD   V +  +S  + +V+  + D  ++  +G  
Sbjct: 28  VEKKGRVMAVSGILL--ECSLPQARIGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGAL 85

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI-DGDD-----SLGKGDLSMEIMSK 131
           + I+ G  V        I  S    G V++  G+ + DG +            +  ++  
Sbjct: 86  DGIAQGATVTPLYQPHCIQVSERLLGSVLDGFGRALEDGGESAFVEPGQASGRTQPVLGD 145

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP  +R R+ +   TG+R +D    +  GQR+G+FAG+G GK+TLL+  AR+   D ++
Sbjct: 146 APPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIV 205

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
             L+GERGRE+REF+  +   +   ++V+V +TSD S + R  A  TA  IAE + ++G 
Sbjct: 206 FGLIGERGRELREFLDHELDDELRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGR 265

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLLI+DS+TRFA + REI    GE     G P SV++ LPRL+ER G +E   G ITA+
Sbjct: 266 QVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQTED--GAITAL 323

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVL++ D+ NDP+AD VRS++DGHIVL R LAE+G YP +D LAS+SR        D  
Sbjct: 324 YSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHT 383

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +    +  L+  +++   +  +G Y+PG D++ D AV+    I  FL+QS  +     V 
Sbjct: 384 RNAGGVRRLMAAYKQVEMLIRLGEYQPGHDVLTDSAVNAQAEITQFLRQSMREPMPYGVI 443

Query: 431 QE 432
           Q+
Sbjct: 444 QQ 445


>gi|259046357|ref|ZP_05736758.1| ATP synthase F1, alpha subunit [Granulicatella adiacens ATCC 49175]
 gi|259036994|gb|EEW38249.1| ATP synthase F1, alpha subunit [Granulicatella adiacens ATCC 49175]
          Length = 502

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 100/431 (23%), Positives = 175/431 (40%), Gaps = 15/431 (3%)

Query: 1   MQKNLETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M      +      + +K  + + G +S I      V  L+  V  G+ V  +       
Sbjct: 3   MSNITARIRDQISSFETKEQIEEIGEVSFIGDGIARVIGLT-NVMAGELVEFENG---AY 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G    +    V +   G  E I  G+ V   GR   +       GRV++ALG+PIDG  +
Sbjct: 59  GMAQNLEKQDVGVIIFGSYENIHEGEPVKRTGRILDVPVGDALIGRVVDALGRPIDGLGA 118

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +      + ++ P  M RQ V++   TG++V+D   P+  GQR  +      GK+++ 
Sbjct: 119 I-ETTKKRPVENEAPGVMQRQSVKQSLPTGLKVVDALVPIGKGQRELIIGDRKTGKTSIA 177

Query: 179 SMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +        I   +G++   V+  +E          + VV A++ +   +  +AP
Sbjct: 178 VDTILNQKGKNTLCIYVAIGQKESTVKALVETLKRYGAMEYTTVVSASASQPAPMLYIAP 237

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                + E +  +G +VL++ D +++ A + REI+      P    YP  VF    RLLE
Sbjct: 238 YAGTAMGEEWMYQGRDVLIVYDDLSKQAAAYREISLLLRRPPGREAYPGDVFYLHSRLLE 297

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P +  
Sbjct: 298 RAAKLSDELGAGSLTALPIIETQAGDISAYIPTNVISITDGQIFLESDLFYSGVRPGLSA 357

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     KK+  +L   +  + E         +   +D    + +++    
Sbjct: 358 GLSVSRVGGSAQIKAMKKVSGTLRIDLASYRELE---AFTQFGSDLDAATQQKLNRGKRT 414

Query: 414 YDFLKQSPSDL 424
            + LKQ     
Sbjct: 415 VEVLKQDVHQP 425


>gi|160942705|ref|ZP_02089947.1| hypothetical protein FAEPRAM212_00181 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445979|gb|EDP22982.1| hypothetical protein FAEPRAM212_00181 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104091|emb|CBL01635.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 464

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 187/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEI 81
           G +  +      +     +   L + +         + +V ++  D V     +   + +
Sbjct: 7   GKVIQVIGPVLDIQFKDGELPELLNAIEIDNHGQKLVVEVAQLTGDNVARCIAMSSTDGL 66

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V      ++       GRV N LG+P+D   +    D    I    P    +Q 
Sbjct: 67  VRGTDAVDTGESIKVPVGDQCLGRVFNLLGEPVDNKPA-PTPDAYWPIHRPAPSYEEQQS 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 126 TTEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL 
Sbjct: 186 RTREGNDLYGEMTESGVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +    + V +   +  FL QS
Sbjct: 364 AVQKVLQRYKELQDIIAIMGMDELSEED-KRTVSRARKVQRFLSQS 408


>gi|25808449|gb|AAN74351.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 157/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 1   GVAVNLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 61  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 119

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 120 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 179

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 180 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 239

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 240 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 299

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 300 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 350


>gi|189017714|gb|ACD71526.1| F1-ATPase alpha subunit [Gymnosiphon bekensis]
          Length = 401

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 159/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG   L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGVLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 305 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 362 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 392


>gi|34539465|gb|AAQ74616.1| F1-ATPase alpha subunit [Triglochin maritima]
          Length = 390

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 94/398 (23%), Positives = 168/398 (42%), Gaps = 22/398 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVG 196
           TG++ +D   P+  GQR  +      GK+ +          L+  A+ +     +   +G
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNATAKENEKLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ ++P +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILESANALEYSILVAATASDPAPLQFLSPYSGCALGEYFRGHGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER     +E   G++TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 EAQAGDVSAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
            S    + ++ E   +     +   +D      +++  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGA 390


>gi|255326274|ref|ZP_05367360.1| ATP synthase F1, alpha subunit [Rothia mucilaginosa ATCC 25296]
 gi|255296728|gb|EET76059.1| ATP synthase F1, alpha subunit [Rothia mucilaginosa ATCC 25296]
          Length = 541

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/446 (20%), Positives = 173/446 (38%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G + S +     V  L   V   + +  +      LG    
Sbjct: 14  ALNEFAASYEPGNAERVEVGRVVSASDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   + +  +G    I  G +V   G    +     + GRV++ LG PID    + + +
Sbjct: 70  LDTRNIGVIVLGDFTGIEEGQVVHRTGEVLSVPVGDAYLGRVVDPLGNPIDDLGPI-EAE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 129 GRRALELQAPGVTQRKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIAIDTIL 188

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +        D     + I   VG++   +             + + +V + + ++   + 
Sbjct: 189 NQKDNWASGDPDKQVRCIYVAVGQKASTIAAVRHTLETRGALEYTTIVASPASDAAGFKY 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 249 LAPYTGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 308

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++T    +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 309 LLERCAKLSDDLGAGSMTGFPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRPA 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A +   KK+  +L   + ++           +   +D      + + 
Sbjct: 369 VDVGISVSRVGGAAQTKAMKKVSGTLKLELAQYRSME---AFAMFASDLDDATKAQLTRG 425

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + L+Q   +  + E+    I  
Sbjct: 426 SRLTELLRQPQYTPYAVEEQVVSIWA 451


>gi|189017666|gb|ACD71502.1| F1-ATPase alpha subunit [Apteria aphylla]
          Length = 400

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVQGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDTLYCVYVAIGQKRSTVAQLVQIVSEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|119471627|ref|ZP_01614012.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7]
 gi|119445406|gb|EAW26693.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7]
          Length = 461

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G +  I      +      V        V  G  +    +V + +   +V    +G  + 
Sbjct: 4   GKVVQIIGAVVDIEFSQDNVPAVYDALKVTDGDLAGLTLEVQQQLGGGVVRTIALGTTDG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G   ++       GR++N LG+PID    +G+ D  M I    P    + 
Sbjct: 64  LRRGAAVSNTGEAIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMSIHRAAPSYEEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT++ +V V
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSIQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +      
Sbjct: 301 PADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPLVIGQEHYDTAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 361 GVQTVLQRYKELKDIIAILGMDELSDED-KQLVSRARKIQRFLSQP 405


>gi|57868882|gb|AAW57437.1| ATP synthase alpha subunit [Aucuba japonica]
          Length = 375

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 19/375 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 124 TAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 184 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 243

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V  I DG I L  
Sbjct: 244 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLET 303

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D
Sbjct: 304 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLD 360

Query: 401 LILDKAVHQVPIIYD 415
                 +++   + +
Sbjct: 361 AATQALLNRGARLTE 375


>gi|88860637|ref|ZP_01135274.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2]
 gi|88817232|gb|EAR27050.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2]
          Length = 461

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 190/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFV-VHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G +  I      +      V  + D V +  G  +    +V + +   +V    +G  + 
Sbjct: 4   GKVVQIIGAVVDIEFPQNSVPAVYDAVNITDGDLAGLTLEVQQQLGGGVVRGIALGTTDG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G+  ++       GR++N LG+PID    +G+ +  M I    P    + 
Sbjct: 64  LRRGATVQNTGKAIQVPVGKATLGRIMNVLGEPIDEAGPIGEEE-RMSIHRAAPSYEEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 123 SSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  
Sbjct: 183 ERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT++ +V V
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSIQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +      
Sbjct: 301 PADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPLVIGQEHYDAAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 361 GVQTVLQRYKELKDIIAILGMDELSDED-KQLVSRARKIQRFLSQP 405


>gi|312962273|ref|ZP_07776765.1| flagellum-specific ATP synthase [Pseudomonas fluorescens WH6]
 gi|311283610|gb|EFQ62199.1| flagellum-specific ATP synthase [Pseudomonas fluorescens WH6]
          Length = 452

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 233/432 (53%), Gaps = 15/432 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L+   +  E   + ++   G +  +  +      L     +G   +    +S      
Sbjct: 10  KRLDGYVEATELPGQPIL--EGRLLRMVGLTLEAEGL--RAAMGSRCMVINDDSYHPVQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   +++ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 66  EAEVMGFSGTKIFLMPVGSLAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRALDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +       +NR  +      GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 KGGM-KAEDWVPMDGPTINPLNRNPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEADIIVVGLIGERGREVKEFIEHSLGAEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF++LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +E   G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  
Sbjct: 303 ERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+     + +          L  R++++RD+  +G Y  G D   D A+   P + 
Sbjct: 363 ASISRVMPAVVTPEHMTRAQQFKQLWSRYQQSRDLISVGAYVAGGDRDTDLAIALQPQLV 422

Query: 415 DFLKQSPSDLSS 426
            +L+Q  +D  S
Sbjct: 423 TYLRQGLNDKIS 434


>gi|281414179|ref|ZP_06245921.1| F0F1 ATP synthase subunit alpha [Micrococcus luteus NCTC 2665]
          Length = 544

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/446 (20%), Positives = 174/446 (39%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y  +     + G + S       V  L   V   + +  +       G    
Sbjct: 14  ALNEFAASYEPSGTDRTEVGRVISAADGIARVEGL-PSVMANELLRFENG---IQGLAQN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   + +  +G  +EI  G  V   G    +     + GRV++ LG+PID    + + +
Sbjct: 70  LDTREIGVVVLGEFQEIREGMEVQRTGEILSVPVGDAFLGRVVDPLGQPIDDLGPI-EAE 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 129 GRRALELQAPTVTERKSVHEPLQTGMKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTIL 188

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A  +  D       +   VG++   +             + + +V + + +    + 
Sbjct: 189 NQKANWESGDVEKQVRCVYVAVGQKASTIAGVRATLEEHGALEYTTIVASPASDPAGFKY 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 249 LAPYAGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 308

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E G  ++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 309 LLERCAKLSDEMGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 368

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++ + +       +   +D    + + + 
Sbjct: 369 VDVGISVSRVGGAAQVKAMKKVSGTLKLDLAQYRDQQ---AFSMFASDLDPATRRQLARG 425

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    E+    I  
Sbjct: 426 ERLMELLKQPQYSPYPVEEQVVSIWA 451


>gi|86131156|ref|ZP_01049755.1| ATP synthase F1, alpha subunit [Dokdonia donghaensis MED134]
 gi|85818567|gb|EAQ39727.1| ATP synthase F1, alpha subunit [Dokdonia donghaensis MED134]
          Length = 525

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 104/450 (23%), Positives = 169/450 (37%), Gaps = 37/450 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   +   + + G + ++      +  L+     G+ V  +   S     V+ +  D
Sbjct: 15  KQLSGFEATASLDEVGTVLTVGDGIARIYGLA-NAQYGELVEFE---SGLEAIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    I  GD V    R   I       GRV+N LG PIDG   +      M 
Sbjct: 71  NVGVVLLGASSSIKEGDTVKRTQRIASIQVGEGITGRVVNTLGLPIDGKGPIAGETYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GKST+      +   
Sbjct: 131 LERKAPGVVFREPVTEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKSTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V    +          + +V A + +   ++  AP    
Sbjct: 191 FYDAGEPVHCIYVAIGQKASTVALIAQVLEDAGAMAYTTIVAANASDPAAMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFFLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 311 VINDDAIAKTMNDLPDSLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLD 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L      F E         +   +
Sbjct: 371 GDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAAFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPS-DLSSED 428
           D      + +     + LKQ+ +   + ED
Sbjct: 428 DAATLNVIEKGKRNVEILKQAENTPFTVED 457


>gi|221209597|ref|ZP_03582578.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD1]
 gi|221170285|gb|EEE02751.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD1]
          Length = 462

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 160/421 (38%), Positives = 224/421 (53%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 42  VSVQGRVNHAVGQILNATGI--RAKLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 99

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 100 AGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGATWVSTQQDPPNPLA 158

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 159 RRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTLLGMIARGAQADVSVIALVGE 218

Query: 198 RGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE     +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 219 RGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 278

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G      G+ITA+ +VLV+
Sbjct: 279 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAGQGAT--GSITALYTVLVE 336

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 337 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQAAARV 396

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 397 RELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAFCAQAQHEDVRFDALLAKLTK 456

Query: 437 L 437
           L
Sbjct: 457 L 457


>gi|190358286|sp|B0RED6|ATPA_CLAMS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
          Length = 545

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 94/432 (21%), Positives = 167/432 (38%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y   K    + GY+         V  L   V   + +         LG   
Sbjct: 13  DALKDFVQSYEPGKASTTEVGYVLDAGDGIAHVQGL-PGVMANELITFADG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEESEIGVIVLGEFAGIEEGMEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGQGEI-AN 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMQRKSVHEPMQTGIKAIDAMIPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +               + +V + + +    +
Sbjct: 188 INQKANWESGDTNKQVRCIYVAIGQKGSTIASVRGALEEAGAMEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGDAQVKSIKKVSGTLKLELAQYRSLE---AFAIFASDLDAASRRQLAR 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GARLTELLKQPQ 436


>gi|171322220|ref|ZP_02911067.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171092457|gb|EDT37802.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 461

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 223/421 (52%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 41  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 98

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S   +V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 99  AGLSPETIVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGAAWVSTQQDPPNPLA 157

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 158 RKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 217

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 218 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 277

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G      G+ITA+ +VLV+
Sbjct: 278 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAGQGAT--GSITALYTVLVE 335

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 336 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQSAARV 395

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q   +    D       K
Sbjct: 396 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQGSHEDVRFDALLAKLTK 455

Query: 437 L 437
           L
Sbjct: 456 L 456


>gi|330963050|gb|EGH63310.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 449

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 157/445 (35%), Positives = 235/445 (52%), Gaps = 20/445 (4%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
             L Q  + ++  L     V   G +S++  +     C      +GD   V +   S  L
Sbjct: 3   AALNQWKDTHAARLSQYSAVRVSGRVSAVRGILL--ECKIPAAKVGDLCEVSKADGSFLL 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGD 116
            +++    +   +  +G  + I +G  +   G   RI       G V++  G+P+  D  
Sbjct: 61  AEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCL 120

Query: 117 DSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
            +    D       +++   P   R R+ +   TGIR ID    L  GQR+G+FAG+G G
Sbjct: 121 GAFAGPDDRRDTLPVIADALPPTQRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCG 180

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           K+TL++  AR+   D ++  L+GERGRE+REF+  +       +SV+V ATSD S + R 
Sbjct: 181 KTTLMAELARNMDCDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERA 240

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G  VLL+LDS+TRFA + REI   SGE     G P SV++ LPR
Sbjct: 241 RAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPR 300

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G SE   G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D
Sbjct: 301 LVERAGMSEN--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAID 358

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+     + + ++  + L  L+  +++   +  +G Y+ G D + D AV     
Sbjct: 359 VSASISRILSNVTNREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDA 418

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL+Q   DL      QE    L
Sbjct: 419 INAFLRQ---DLREPVPLQETLDGL 440


>gi|20146612|gb|AAM12460.1| ATP synthase alpha subunit [Schima superba]
          Length = 389

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 90/397 (22%), Positives = 164/397 (41%), Gaps = 23/397 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G++TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            + ++ E   +  +  +   +D      +++   + +
Sbjct: 356 ELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 389


>gi|221200561|ref|ZP_03573603.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2M]
 gi|221209218|ref|ZP_03582209.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2]
 gi|221170908|gb|EEE03364.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2]
 gi|221179902|gb|EEE12307.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia multivorans CGD2M]
          Length = 459

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 160/421 (38%), Positives = 225/421 (53%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 39  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 96

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 97  AGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGATWVSTQQDPPNPLA 155

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 156 RRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 215

Query: 198 RGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE     +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 216 RGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 275

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G  +   G+ITA+ +VLV+
Sbjct: 276 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAG--QGAAGSITALYTVLVE 333

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 334 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQAAARV 393

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 394 RELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAFCAQAQHEDVRFDALLAKLTK 453

Query: 437 L 437
           L
Sbjct: 454 L 454


>gi|332995862|gb|AEF05917.1| F0F1 ATP synthase subunit alpha [Alteromonas sp. SN2]
          Length = 513

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 102/448 (22%), Positives = 184/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +   +   V       G I ++T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKKRIEQFNVSSEARNEGTIVAVTDGIIRIHGLAD-VMQGEMIELPGS- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 59  --RYAIALNLERDSVGAVVMGPYADLQEGVKVQSTGRILEVPVGNALLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++        +    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAIDAAGFE-PVEKIAPGVIERQSVDQPIQTGYKSVDAMIPVGRGQRELIIGDRQCGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +      +      K +   VG++   +   +      D L  +++V A++ ES  L+
Sbjct: 176 TAMAIDAIINQKGTGIKCVYVAVGQKASTIANVVRKLEEHDALGHTIIVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     ++              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEQYVERYTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNAGIRPAVNAGVSVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    + +     + + +KQ      S
Sbjct: 413 LDDATREQLEHGERVTELMKQKQYAPLS 440


>gi|6561641|gb|AAF16985.1|AF197653_1 ATPase alpha subunit [Petrophile canescens]
          Length = 408

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 164/403 (40%), Gaps = 23/403 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 ELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 395


>gi|115358971|ref|YP_776109.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria AMMD]
 gi|170702397|ref|ZP_02893286.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
 gi|115284259|gb|ABI89775.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria AMMD]
 gi|170132691|gb|EDT01130.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
          Length = 461

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 222/421 (52%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 41  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 98

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 99  AGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGAAWVSTQQDPPNPLA 157

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 158 RKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 217

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 218 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 277

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G      G+ITA+ +VLV+
Sbjct: 278 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAGQGAT--GSITALYTVLVE 335

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 336 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQSAARV 395

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q   +    D       K
Sbjct: 396 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQGSHEDVRFDALLAKLTK 455

Query: 437 L 437
           L
Sbjct: 456 L 456


>gi|315128171|ref|YP_004070174.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas sp. SM9913]
 gi|315016684|gb|ADT70022.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas sp. SM9913]
          Length = 513

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I S+T     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEKFEVVSEARNEGTIVSVTDGIIRIHGLAD-CMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D +    +G   +++ G  V+  GR   +   A   GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSIGAVVMGPYADLTEGVKVYTTGRILEVPVGAGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   D    +    P  + RQ V++  +TG + ID   P+  GQR  V      GK
Sbjct: 117 GKGALD-NDGFEPVEKIAPGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDTGVKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G+N L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPFSGCTMGEYFRDRGENALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER      +              G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNTDYVEKFTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|313115085|ref|ZP_07800574.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622599|gb|EFQ06065.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 470

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 113/406 (27%), Positives = 190/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G I  +      V   +  +  L + +    + ++   +V + +N   V    +   E +
Sbjct: 4   GTIIRVAGPVVDVQFTAGKLPALQEALTVTAEGTERTMEVTQHVNETTVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G            GR+ + LG+PIDG  S+        I  K P    ++ 
Sbjct: 64  GKGMTVQATGHGLTAPVGEATLGRMFDPLGRPIDGKGSVDDVP-HWPIHRKAPSFAEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 ATEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGCDLWGEMNESGVLNKTALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +  ++G+IT+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALMGRMPSAVGYQPTLANELGALQERI--TSTKEGSITSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPLAS SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G    +D      V +   +  FL Q 
Sbjct: 361 KVQSILQRYQELQDIIAILGMDE-LDENDKLTVARARKLQKFLSQP 405


>gi|331007712|ref|ZP_08330842.1| ATP synthase alpha chain [gamma proteobacterium IMCC1989]
 gi|330418471|gb|EGG93007.1| ATP synthase alpha chain [gamma proteobacterium IMCC1989]
          Length = 514

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 180/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ ++   +L V       G + S+T     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISEIIKNRIDSLDVSSEAKNVGTVVSVTDGIIRIHGLAD-AMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + I+ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVVLGDYQTIAEGQSCKCTGRILEVPVGPELQGRVVDALGIPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  I    P  + RQ V++  + G++ ID   P+  GQR  +      GK+
Sbjct: 119 KGPVD-AKQTDAIEKIAPGVIARQSVDQPVQLGLKAIDAMVPVGRGQRELIIGDRQTGKT 177

Query: 176 TLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +      +      K I   +G++   +   +         + +++V AT+ +   ++ 
Sbjct: 178 AIAVDAIINQKGKGIKCIYVAIGQKASSIASVVRKLEEHGAMEHTIIVAATASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                     G++TA+  +     + +  +  +V SI DG I L+
Sbjct: 298 LLERASRVSTTYVEEFTKGEVKDKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLD 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P +D   SVSR+   A S   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDLFNSGIRPAMDAGISVSRVGGAAQSKIVKKLSGGIRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D      + Q   + + +KQ  
Sbjct: 415 DDATKAQLDQGESVTELMKQKQ 436


>gi|34539401|gb|AAQ74584.1| F1-ATPase alpha subunit [Petermannia cirrosa]
          Length = 416

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/408 (22%), Positives = 163/408 (39%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IQAGEXVXFA---SGVKGIALXLEXENVGIVVFGSDTXIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDXATQALPNRGARLTEVPKQPQ 400


>gi|329894814|ref|ZP_08270614.1| ATP synthase alpha chain [gamma proteobacterium IMCC3088]
 gi|328922708|gb|EGG30042.1| ATP synthase alpha chain [gamma proteobacterium IMCC3088]
          Length = 514

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 177/447 (39%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ +       L         G I S+T     +  L+  V  G+ +  +G   
Sbjct: 3   QLNPSEISDIIRQRIDQLDVSSEARNEGTIVSVTDGIIRIHGLTD-VMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVVLGDYKSLAEGQTCRCTGRILEVPVGPELQGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  I    P  + RQ V++  + G++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGPVAAT-ATDAIEKVAPGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +  +   K I   +G++   V   +           ++VV AT+ +   ++ 
Sbjct: 178 AIAVDAIINQKNTGIKCIYVAIGQKASSVAAVVRKLEEHGAMDHTIVVAATASDPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G + L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGQDALIIYDDLTKQAIAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEQFTNGEVKGQTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDMFNSGVRPAMNAGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DEATKAQLDHGERVTELMKQKQYSPRS 441


>gi|284504912|gb|ADB91405.1| ATP synthase alpha subunit [Lactobacillus sp. 3-6]
          Length = 382

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 98/388 (25%), Positives = 158/388 (40%), Gaps = 14/388 (3%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           I         L      G+ +          G V  +  + V I  +G  + I  GD V 
Sbjct: 3   IGDGIARAHGL-DNALQGELLEFSNG---VYGMVQNLESNDVGIVVLGDFDGIREGDTVK 58

Query: 89  HWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             GR   +       GRV+N LG+P+DG   + K   +  I  K P  M RQ V +  +T
Sbjct: 59  RTGRIMEVPVGDAMIGRVVNPLGQPVDGLGEI-KTTNTRPIEHKAPGIMQRQSVSEPLQT 117

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREF 205
           GI+ ID   P+  GQR  +      GK+   + ++  + D     +   +G++   VR  
Sbjct: 118 GIKAIDALVPIGRGQRELIIGDRKTGKTSVAIDAILNQKDQDMICVYVAIGQKDSTVRAQ 177

Query: 206 IEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +E       +  ++VV A   E   L  +AP     + E F   G +VL++ D +++ A 
Sbjct: 178 VETLKKLGAMDYTIVVTAGPAEPAPLLYLAPYAGAAMGEEFMMNGKHVLIVYDDLSKQAT 237

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + RE++      P    YP  VF    RLLER      E   G++TA+  +     + + 
Sbjct: 238 AYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPIIETHAGDISA 297

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            I  +V SI DG I L+      G  P +D  ASVSR+   A     K +  +L   +  
Sbjct: 298 YIPTNVISITDGQIFLDSDSFYSGVRPAIDAGASVSRVGGDAQIKAMKSVAGTLRLDLAS 357

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQV 410
           + E         +   +D      +++ 
Sbjct: 358 YRELE---SFSQFGSDLDAATQAKLNRG 382


>gi|307731459|ref|YP_003908683.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1003]
 gi|323527841|ref|YP_004229994.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1001]
 gi|307585994|gb|ADN59392.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1003]
 gi|323384843|gb|ADX56934.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1001]
          Length = 464

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V       S    + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRSDMPKVYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G+   +       GR+++ LG+PID    +   D    I  K P 
Sbjct: 61  GASDGLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ASDNMRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 YSITRGVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 407


>gi|110635547|ref|YP_675755.1| F0F1 ATP synthase subunit beta [Mesorhizobium sp. BNC1]
 gi|118573695|sp|Q11DD5|ATPB_MESSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110286531|gb|ABG64590.1| ATP synthase F1 subcomplex beta subunit [Chelativorans sp. BNC1]
          Length = 519

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 186/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G +  +      V        + + +    + +  + +V   +  + V    +   + + 
Sbjct: 52  GSVRQVIGAVVDVQFQENLPAILNALETDNQGNRLVLEVAQHLGENTVRCIAMDSTDGLV 111

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+IN +G+P+D    +   +    I    P  + +   
Sbjct: 112 RGQEVRDTGAPISVPVGPEMLGRIINVIGEPVDEAGPITATEFRG-IHQPAPEYVEQSTE 170

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 171 AQILVTGIKVLDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGER 230

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   +++        G    K+ +V    +E P  R    LT +T+AEYF  +G 
Sbjct: 231 TREGNDLYHEFIESGVNKKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQ 290

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 291 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSV 348

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+R+++E+G YP VDPL S SR+ D      + 
Sbjct: 349 QAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRMLDPQIVGEEH 408

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++  ++   + R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 409 YQVARAVQQTLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQP 458


>gi|291561953|emb|CBL40761.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 463

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 117/407 (28%), Positives = 193/407 (47%), Gaps = 14/407 (3%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR--INLDIVYICPVGIGEE 80
           G I+ + S    +         + D +    K+   L   +   +  D V    +G  + 
Sbjct: 7   GKITQVISAVLDIKFPQGGLPEINDAIEITTKDGGILTVEVAQHLGDDTVRCIALGPTDG 66

Query: 81  ISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G D V   G   +       GR+ N LG+PID  ++  K +  + I  K P    + 
Sbjct: 67  LVRGMDAVATGGPIMVPVGEQTLGRIFNVLGQPIDNKEA-PKTEKKLPIHCKAPSFEEQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VG
Sbjct: 126 TETEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVG 185

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G  +VLL
Sbjct: 186 ERTREGNDLYYEMSDSGVINKTTMVFGQMNEPPGSRMRVGLTGLTMAEYFRDEGGKDVLL 245

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V 
Sbjct: 246 FIDNIFRFSQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVY 303

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D      +  K+ 
Sbjct: 304 VPADDLTDPAPANTFTHLDATTVLSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  + G     +      V +   I  FL Q 
Sbjct: 364 RGVQEVLQRYKELQDIIAMLGMDELSEED-KLTVSRARKIQRFLSQP 409


>gi|171909871|ref|ZP_02925341.1| ATP synthase F1, alpha subunit [Verrucomicrobium spinosum DSM 4136]
          Length = 510

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 105/458 (22%), Positives = 181/458 (39%), Gaps = 28/458 (6%)

Query: 1   MQKNLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   L+ +  ++A   +       G +  I      +  LS  V L + +   G      
Sbjct: 1   MSSILQEIETEIAGLKTSVTRSNVGVVREIGDGVAKIEGLSD-VMLNEMIEFPGG---LY 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +    V    +G G  +  GD V   GR   +       GRV+N+LG+P+DG   
Sbjct: 57  GLALNLEETEVGAILLGDGLNVKEGDEVKTTGRLLEVPVGNGVLGRVVNSLGQPLDGKGD 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + KGD    +    P  + R+ V    +TGI  +D   P+  GQR  +      GK+T+ 
Sbjct: 117 I-KGDAFYPVEKIAPGIVKRKSVSVPLQTGIMSVDAMIPIGRGQRELIIGDRSTGKTTIA 175

Query: 179 SMFARS---------------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                S                     I   VG++   +   I+          +++V A
Sbjct: 176 VDTIISQARQNKAAEEGQLQGHKRVICIYVAVGQKQANIARVIKTLEDAGALPYTIIVSA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           ++ +S   + +AP     + EYF  KG++VL+I D +++ A + R+++           Y
Sbjct: 236 SAADSATNQYLAPYAGCAMGEYFMDKGEDVLIIFDDLSKHAVAYRQVSLVLRRPSGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSARLSDAAGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIFLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P +    SVSR+   A +   KK+  +    + +F E   +     +   +D
Sbjct: 356 DLFYQGVRPAISVGLSVSRVGSAAQTKAIKKVSGTTKLDLAQFRE---LAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
                 + +   I +  KQ   +  S ++   I   +Q
Sbjct: 413 AATKAKLDRGQRIVELFKQGQYNPKSLEIMASILWAMQ 450


>gi|262281308|ref|ZP_06059089.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
 gi|262257134|gb|EEY75871.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
          Length = 519

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +    +L         G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRISDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDEPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSADYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|170737794|ref|YP_001779054.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
 gi|169819982|gb|ACA94564.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia MC0-3]
          Length = 458

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 223/421 (52%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 38  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 95

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 96  AGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGAAWVSTQQDPPNPLA 154

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 155 RKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 214

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 215 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 274

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G  +   G+ITA+ +VLV+
Sbjct: 275 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAG--QGAHGSITALYTVLVE 332

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   +   + +
Sbjct: 333 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQHAAARV 392

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 393 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQASDEDVRFDALLAKLTK 452

Query: 437 L 437
           L
Sbjct: 453 L 453


>gi|262341318|ref|YP_003284173.1| ATP synthase F1 subunit alpha [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272655|gb|ACY40563.1| ATP synthase F1 subunit alpha [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 527

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 178/443 (40%), Gaps = 35/443 (7%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+    ++ + + G +  +         L+     G+ V     N++  G V+ +  D
Sbjct: 15  EQLSNFQFESKLSESGIVIQVGDGVARSFGLN-SAFYGELVEF--NNTEVKGIVLNLEED 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  +   ++I  GD+V   G+   I       GRV++ LG PIDG   +     SM 
Sbjct: 72  YVSIVLLNSSKDIKEGDVVQRTGKIFSIQVGEGMLGRVVDTLGNPIDGKGPIEGKLFSMP 131

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V++  +TGI+ ID   P+  GQR  +      GK+T+      +   
Sbjct: 132 LERKAPGVIYREPVKEPLQTGIKFIDSMIPIGRGQRELIIGDRQTGKTTIAIDAIINQKK 191

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     I   V ++G  +               +V+V ATS +   ++  AP +  
Sbjct: 192 FYEQNKPVYCIYVAVSQKGSTIARIANLLQEKGAMSYTVIVSATSSDPASMQVFAPFSGT 251

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G + L+I D +++ A S REI+      P    YP  VF    RLLER   
Sbjct: 252 AIGEYFRDTGRSSLVIYDDLSKQAVSYREISLLLRRPPGREAYPGDVFYLHSRLLERASK 311

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             K+                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 312 IIKDQKMAEKMNDIPESIRKEVKGGGSLTALPIIETQSGDISSYIPTNVISITDGQIFLE 371

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           + L   G  P ++   SVSR+   A     +K+  +L     +F E         +   +
Sbjct: 372 KDLFHSGIRPAINESISVSRVGGAAQIQSMRKVSGTLKLDQAQFRELE---SFSKFGSEL 428

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D    + + +  I  + LKQ P 
Sbjct: 429 DPSTMEILKKGKINIEILKQPPH 451


>gi|269957234|ref|YP_003327023.1| ATP synthase F1 subunit alpha [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305915|gb|ACZ31465.1| ATP synthase F1, alpha subunit [Xylanimonas cellulosilytica DSM
           15894]
          Length = 543

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/446 (20%), Positives = 175/446 (39%), Gaps = 24/446 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L    + Y  +  +  + G ++        V  L       + +  +      LG  +
Sbjct: 13  AALDSFVKSYEPDGPVTEEVGRVTLAADGIANVEGL-PGAMANELLRFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    +  G  V   G    +     + GRV++ LG PIDG  ++   
Sbjct: 69  NLDVREIGVVVLGDFTGVEEGQEVRRTGEVLSVPVGEGYLGRVVDPLGNPIDGLGAITGI 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALELQAPGVMQRKSVHEPLQTGIKAIDSMIPIGRGQRQLIIGDRQTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +             + + +V A + +    +
Sbjct: 189 INQKANWESGDPTKQVRCIYVAIGQKGSTIASVRGALEDAGALEYTTIVAAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 249 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGAGSMTGLPMIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D      + +
Sbjct: 369 AVDVGISVSRVGGDAQIKAMKKVAGTLKLELAQYRSLE---AFAMFASDLDAASRGQLAR 425

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEIT 434
              + + LKQ   +    E+    I 
Sbjct: 426 GAALMELLKQPQYTPYPVEEQVASIW 451


>gi|222087437|ref|YP_002545974.1| ATP synthase F1, beta subunit [Agrobacterium radiobacter K84]
 gi|221724885|gb|ACM28041.1| ATP synthase F1, beta subunit [Agrobacterium radiobacter K84]
          Length = 485

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 107/415 (25%), Positives = 186/415 (44%), Gaps = 18/415 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
            V  G ++ +      V        + + +      S  + +V   +  + V    +   
Sbjct: 17  AVSVGKVTQVIGAVVDVHFDGDLPKILNALETSNNGSRLVLEVAQHLGENSVRTIAMDST 76

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G    +       GR++N +G+P+D    L        I  + P  + 
Sbjct: 77  EGLVRGQPVSDTGAPISVPVGYETLGRIMNVIGEPVDEAGPLITA-TKRSIHQEAPSYVE 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + 
Sbjct: 136 QSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 195

Query: 195 VGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +   + +        G    K+ +V    +E P  R    LT +T+AE F 
Sbjct: 196 VGERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFR 255

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +   KG+
Sbjct: 256 DEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGS 313

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D    
Sbjct: 314 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPLVV 373

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 374 GEEHYEIARKVQSTLQRYKALQDIIAILGMDELSEED-KLAVARARKIERFLSQP 427


>gi|7620541|gb|AAF64657.1| F1 ATPase alpha subunit [Trochodendron aralioides]
          Length = 400

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 166/403 (41%), Gaps = 23/403 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V     +S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVXGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + ++ E   +  +  +   +D       ++   + +  KQ 
Sbjct: 356 LELAQYRE---VAALAQFGSDLDDATQXLPNRGARLTEVPKQP 395


>gi|186886253|gb|ACC93529.1| ATPase F1 alpha subunit [Juncus lomatophyllus]
          Length = 367

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 158/371 (42%), Gaps = 19/371 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGAPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLL--------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-K 215
            +      GK+ +          M  + +     +   +G++   V + ++     N   
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNGKENETLYCVYVAIGQKRSTVAQLVQILSEANALD 177

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
            SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++     
Sbjct: 178 YSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRR 237

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILD 333
            P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI D
Sbjct: 238 PPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITD 297

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +    
Sbjct: 298 GQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFA 354

Query: 394 GYRPGVDLILD 404
            +   +D    
Sbjct: 355 QFGSDLDAATQ 365


>gi|109900595|ref|YP_663850.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas atlantica T6c]
 gi|123360115|sp|Q15MU2|ATPA2_PSEA6 RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|109702876|gb|ABG42796.1| ATP synthase F1, alpha subunit [Pseudoalteromonas atlantica T6c]
          Length = 513

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 185/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +   +   V       G I  +T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKQRIEQFEVVSEARNEGTIVGVTDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLQEGAKVTSSGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    +    P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGAI-EADGFEPVEKIAPGVIERQSVDQPIQTGYKSVDAMIPVGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGVKCVYVAVGQKASTIANVVRKLEEHGAMAHTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNENYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +     + + +KQ+     S
Sbjct: 413 LDEATRAQLEHGERVMELMKQNQYAPLS 440


>gi|269468571|gb|EEZ80220.1| F0F1-type ATP synthase, beta subunit [uncultured SUP05 cluster
           bacterium]
          Length = 459

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 117/406 (28%), Positives = 193/406 (47%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V   +  +      +   + S  L    ++  ++V    +G  E 
Sbjct: 1   MSTGKIIQIIGAVIDVEFSADSIPNIYNALTVTETSLTLEVQQQLGDNVVRAIAMGSSEG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   ++       GR++N LG+PID    +   +   EI    PP     
Sbjct: 61  LKRGLEVTDNGSAIKVPVGTKTLGRIMNVLGEPIDNAGDIDP-EAEWEIHRSAPPYDELA 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 120 PAAELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  +G +VLL 
Sbjct: 180 ERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++ SE+  L ERI  +  +KG+IT++ +V V
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVS 374
             D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D     +E   +  
Sbjct: 298 PADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVAR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +    ++V +   I  FL Q 
Sbjct: 358 GVQGVLQRYKELKDIIAILGMDELSEED-KQSVSRARKIQRFLSQP 402


>gi|224825759|ref|ZP_03698863.1| ATPase, FliI/YscN family [Lutiella nitroferrum 2002]
 gi|224601983|gb|EEG08162.1| ATPase, FliI/YscN family [Lutiella nitroferrum 2002]
          Length = 436

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 235/432 (54%), Gaps = 10/432 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLD 68
           +  E     +    G +   + +      +   +  G   + +    + L  QV+    +
Sbjct: 7   EKLELDDVPVATVTGRLVGASGLLL--ESVGCPLETGQRCLIETAAGEWLQAQVVGFKRE 64

Query: 69  IVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           + Y+ P      ++ G  V        +     W GR++N LG+P+DG   LG G+  + 
Sbjct: 65  VSYLMPFKKPVGLTTGARVQPAPDAAGLFIGPSWLGRIVNGLGEPLDGLGRLG-GEHPLA 123

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
                   + ++ V+     G+R I+    L  GQR+G+FAGSG+GKS LL M  R    
Sbjct: 124 AHPPRVNPLRKRPVDTPLDVGVRAINGLLTLGRGQRVGLFAGSGVGKSVLLGMITRHTEA 183

Query: 188 DKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D V++ L+GERGREVREF+E     + L K+V+VVA +DESP++R  A     TIA +F 
Sbjct: 184 DVVVVGLIGERGREVREFVEHALGAEGLAKAVLVVAPADESPLMRLKATELTHTIAAHFR 243

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL++DS+TR+A + RE+A   GE P  RGYP SVF  LP L E  G  E  +G+
Sbjct: 244 DQGRHVLLLVDSLTRYAMAQREVALALGEPPATRGYPPSVFGLLPTLAESAGNGEG-EGS 302

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ++A+ +VL +GD+  DP+ D+ R+ILDGHIVL+R LAE G YP +D  ASVSR       
Sbjct: 303 MSAIYTVLAEGDDQQDPVVDTARAILDGHIVLSRGLAERGHYPAIDIAASVSRCMGLVAG 362

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             +++   +L  L  R++E R +  +GGY PG D   D+AV ++P+I  FL+Q   D + 
Sbjct: 363 VSQREAARTLRGLWARYQEVRALIPLGGYVPGADAETDRAVQRMPLIERFLRQ---DAAV 419

Query: 427 EDVFQEITKKLQ 438
              +    ++L+
Sbjct: 420 AAPYGATLQQLE 431


>gi|89257058|ref|YP_514420.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315414|ref|YP_764137.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503268|ref|YP_001429333.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009445|ref|ZP_02274376.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368297|ref|ZP_04984316.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
           257]
 gi|254369895|ref|ZP_04985904.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022]
 gi|290953659|ref|ZP_06558280.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312976|ref|ZP_06803685.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           holarctica URFT1]
 gi|118573537|sp|Q2A1I2|ATPB_FRATH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122324600|sp|Q0BK84|ATPB_FRATO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201704|sp|A7NEH4|ATPB_FRATF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|89144889|emb|CAJ80234.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130313|gb|ABI83500.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254106|gb|EBA53200.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica
           257]
 gi|156253871|gb|ABU62377.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157122865|gb|EDO66982.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022]
          Length = 458

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 183/410 (44%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  +      V             V+   N    G V+     I   +V    +G
Sbjct: 1   MSTGKIIQVIGAVIDVEFARDNTP----KVYDALNVVEAGLVLEVQQQIGDGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +      +       GR++N LG+PID    +   +    I    P  
Sbjct: 57  SSDGLRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTE-KRSIHQAPPAY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                  +  +TGI+V+D+  P   G ++G+F G+G+GK+  +     +   +     + 
Sbjct: 116 DELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVF 175

Query: 193 SLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           S VGER RE  +F  +    + L K  +V    +E P  R    L+ +TIAE F  +  +
Sbjct: 176 SGVGERTREGNDFYYEMKYSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  S LD  IVL+R +AE G YP VDPL S SR  D      D  
Sbjct: 294 AVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   ++  ++ R++E +DI  I G     D    K V +   I  FL Q 
Sbjct: 354 ETARAVQKVLQRYKELKDIIAILGMDELSDED-KKIVDRARKIQRFLSQP 402


>gi|240127359|ref|ZP_04740020.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
 gi|268685732|ref|ZP_06152594.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
 gi|268626016|gb|EEZ58416.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035]
          Length = 465

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   D S  I    P     
Sbjct: 60  GLKRGMTVSDTGSPITVPVGKGTLGRIVDVLGTPIDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + S V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D     AV +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLAVMRARKIQRFLSQP 408


>gi|34539471|gb|AAQ74619.1| F1-ATPase alpha subunit [Victoria cruziana]
          Length = 406

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/396 (22%), Positives = 161/396 (40%), Gaps = 24/396 (6%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 5   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 61

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 62  VVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 120

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK-------------VIISLVGERGREVREFIEDYLG 211
            +      GK+ +      +                   +   +G++   V + ++    
Sbjct: 121 LIIGDRQTGKTAIAIDTILNQKQIHSKSKGISESETLYCVYVAIGQKRSTVAQLVQILPE 180

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++
Sbjct: 181 ANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMS 240

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V
Sbjct: 241 LLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNV 300

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
             I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   
Sbjct: 301 IPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE--- 357

Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           +  +  +   +D       ++   + +  KQ   + 
Sbjct: 358 VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 393


>gi|77920586|ref|YP_358401.1| F0F1 ATP synthase subunit alpha [Pelobacter carbinolicus DSM 2380]
 gi|115312232|sp|Q3A076|ATPA2_PELCD RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|77546669|gb|ABA90231.1| ATP synthase F1, alpha subunit [Pelobacter carbinolicus DSM 2380]
          Length = 522

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 115/433 (26%), Positives = 188/433 (43%), Gaps = 15/433 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++  +TL    E++S  L VQ  G++  I      V  L   V   + +   G     L
Sbjct: 12  LKEAFDTLDSALENFSPVLAVQHVGWVEYIGKGIARVGGL-PGVRCEELLAFPGG---LL 67

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  +  + D V +   G    +  GD V   GR   +       GRV+N +G+ +DG   
Sbjct: 68  GLALDADEDQVGVVLFGDYTHLQAGDEVRRTGRVLDVPVGDGLIGRVVNPVGRCLDGGKP 127

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      + +    PP M+R  V +   TGI+VID   P+  GQR  +      GK+ + 
Sbjct: 128 VAFQRQ-LPVERPAPPIMDRLPVTQPLMTGIKVIDALIPIGRGQRELILGDRQTGKTAIA 186

Query: 179 SMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
                +  D     I   +G+R   V   + +         ++VVVA  D  P L+ +AP
Sbjct: 187 IDAIINQRDQDVVCIYCAIGQRAASVAGVVTELRNCGALDYTIVVVAEGDAPPGLQYIAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A ++AE+F   G +VL++ D +TR A + REI+      P    +P  +F    RLLE
Sbjct: 247 YAATSMAEHFMEHGRDVLIVYDDLTRHARAYREISLLLRRPPGREAFPGDIFYVHSRLLE 306

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +    G++TA+  +  +  N +  I  ++ SI DG I L+  L ++G  P VD 
Sbjct: 307 RATHLNEPRGGGSLTALPIIETEAQNLSAYIPTNLISITDGQIYLSPELFQKGLLPSVDV 366

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  K   A  + +   L     +FEE         +   +D    + +H+   +
Sbjct: 367 GKSVSRVGGKTQLAAYRAVAGDLRLTYAQFEELE---AFARFGTRLDEETRQVLHRGRRV 423

Query: 414 YDFLKQSPSDLSS 426
              LKQ+ S   +
Sbjct: 424 RAILKQTQSSPRT 436


>gi|77361904|ref|YP_341479.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas haloplanktis
           TAC125]
 gi|118573724|sp|Q3IK50|ATPB_PSEHT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|76876815|emb|CAI88037.1| membrane-bound ATP synthase, F1 sector, beta-subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 461

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G +  I      +      V        V  G  +    +V + +   +V    +G  + 
Sbjct: 4   GKVVQIIGAVVDIEFPQNNVPAVYDALRVTDGDLTGLTLEVQQQLGGGVVRTIAMGTTDG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G   ++       GR++N LG+PID    +G+ D  M I    P    + 
Sbjct: 64  LRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMSIHRAAPTYEEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT++ +V V
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSIQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +      
Sbjct: 301 PADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQVIGQEHYDTAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 361 GVQTVLQRYKELKDIIAILGMDELSDED-KQLVSRARKIQRFLSQP 405


>gi|331083913|ref|ZP_08333022.1| ATP synthase F1 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403338|gb|EGG82898.1| ATP synthase F1 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 502

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 174/423 (41%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  +++     V + G +  +     TV  +  +   G+ V  +       G V 
Sbjct: 10  ISILKEEIDNFQSTEGVKEVGNVIWVGDGIATVYGI-DHAMYGEIVTFENG---VKGMVQ 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + + +   G    I  G  V     R  I     + GR+++ALG PIDG   + + 
Sbjct: 66  DIKRNEIGVIIFGKDTGIKEGTKVARTKKRAGIPVGENFIGRIVDALGAPIDGKGEI-EA 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  + P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 125 DDYRPIEQEAPGIIDRKSVSVPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAIDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +           + V  AT+ +   L+ + P +  
Sbjct: 185 LNQKGKDVMCIYVAIGQKASTVAKLVGTLEKYGAMEYTTVFSATASDCAPLQYIVPYSGT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  I  +V SI DG I L   L  EG  P V+   SV
Sbjct: 305 LSDEAGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFEGVRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   S+   + ++ E +   +   +   +D      +     + + L
Sbjct: 365 SRVGGAAQTKAMKKASGSMRIDLAQYREMQ---VFTQFSSDLDETTKAQLDYGKCLMELL 421

Query: 418 KQS 420
           KQ 
Sbjct: 422 KQP 424


>gi|295678133|ref|YP_003606657.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1002]
 gi|295437976|gb|ADG17146.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1002]
          Length = 464

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRESMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G    +       GR+++ LG+PID    +   + +  I  K P 
Sbjct: 61  GASDGLRRGTVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPIS-SETTRAIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDQLSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 YSITRGVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 407


>gi|239917341|ref|YP_002956899.1| proton translocating ATP synthase, F1 alpha subunit [Micrococcus
           luteus NCTC 2665]
 gi|239838548|gb|ACS30345.1| proton translocating ATP synthase, F1 alpha subunit [Micrococcus
           luteus NCTC 2665]
          Length = 555

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/446 (20%), Positives = 174/446 (39%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y  +     + G + S       V  L   V   + +  +       G    
Sbjct: 25  ALNEFAASYEPSGTDRTEVGRVISAADGIARVEGL-PSVMANELLRFENG---IQGLAQN 80

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   + +  +G  +EI  G  V   G    +     + GRV++ LG+PID    + + +
Sbjct: 81  LDTREIGVVVLGEFQEIREGMEVQRTGEILSVPVGDAFLGRVVDPLGQPIDDLGPI-EAE 139

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 140 GRRALELQAPTVTERKSVHEPLQTGMKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTIL 199

Query: 179 SMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +  A  +  D       +   VG++   +             + + +V + + +    + 
Sbjct: 200 NQKANWESGDVEKQVRCVYVAVGQKASTIAGVRATLEEHGALEYTTIVASPASDPAGFKY 259

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     I +++   G +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 260 LAPYAGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 319

Query: 293 LLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E G  ++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 320 LLERCAKLSDEMGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 379

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++ + +       +   +D    + + + 
Sbjct: 380 VDVGISVSRVGGAAQVKAMKKVSGTLKLDLAQYRDQQ---AFSMFASDLDPATRRQLARG 436

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + LKQ   S    E+    I  
Sbjct: 437 ERLMELLKQPQYSPYPVEEQVVSIWA 462


>gi|34539335|gb|AAQ74551.1| F1-ATPase alpha subunit [Ipheion uniflorum]
          Length = 408

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 158/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 391


>gi|34539209|gb|AAQ74488.1| F1-ATPase alpha subunit [Trichopus sempervirens]
          Length = 389

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/389 (23%), Positives = 160/389 (41%), Gaps = 22/389 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +    +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGARRDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRGTKESETLYCVYVAIGQKRSTVAQLVQILPEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKEVCGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
               +   +D      +++   + +  KQ
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQ 389


>gi|7708676|emb|CAB90016.1| ATP synthase beta subunit [Thunbergia coccinea]
          Length = 484

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +G+ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 48  KGRDTVGEPINVXCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPVDNLGPVDTS-TTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         I   VGER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESGVINEENIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|299771944|ref|YP_003733970.1| F0F1 ATP synthase subunit alpha [Acinetobacter sp. DR1]
 gi|298702032|gb|ADI92597.1| F0F1 ATP synthase subunit alpha [Acinetobacter sp. DR1]
          Length = 514

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 180/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +    +L         G I  ++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISALIKQRISDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 60  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPID-AKLTDAVEKVAPGVIWRQSVDEPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 178 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSADYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQYAPYS 441


>gi|167034922|ref|YP_001670153.1| flagellum-specific ATP synthase [Pseudomonas putida GB-1]
 gi|166861410|gb|ABY99817.1| flagellar protein export ATPase FliI [Pseudomonas putida GB-1]
          Length = 451

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 158/429 (36%), Positives = 233/429 (54%), Gaps = 15/429 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L T A+  E  ++ +V   G +  +  +      L     +G   +    +S      
Sbjct: 10  KRLGTYAEAIELPAQPVV--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPVQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   V++ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 66  EAEVMGFSGPKVFLMPVGSIVGIAPGARVVPLDDGGRL--PMGMSMLGRVLDGAGRALDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 KGGM-KAEDWVPMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    + +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G  E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  
Sbjct: 303 ERAGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+  +   AD  +       L  R  ++RD+  +G Y  G D   D A+     + 
Sbjct: 363 ASISRVMPQVVDADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLV 422

Query: 415 DFLKQSPSD 423
           +FL+Q   +
Sbjct: 423 EFLRQGLRE 431


>gi|126176547|ref|YP_001052696.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS155]
 gi|153002861|ref|YP_001368542.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS185]
 gi|160877608|ref|YP_001556924.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS195]
 gi|217975448|ref|YP_002360199.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS223]
 gi|304412687|ref|ZP_07394290.1| ATP synthase F1, beta subunit [Shewanella baltica OS183]
 gi|307305848|ref|ZP_07585594.1| ATP synthase F1, beta subunit [Shewanella baltica BA175]
 gi|166222413|sp|A3DAR4|ATPB_SHEB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222414|sp|A6WUJ0|ATPB_SHEB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081344|sp|A9KX06|ATPB_SHEB9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808163|sp|B8EDV0|ATPB_SHEB2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|125999752|gb|ABN63827.1| ATP synthase F1, beta subunit [Shewanella baltica OS155]
 gi|151367479|gb|ABS10479.1| ATP synthase F1, beta subunit [Shewanella baltica OS185]
 gi|160863130|gb|ABX51664.1| ATP synthase F1, beta subunit [Shewanella baltica OS195]
 gi|217500583|gb|ACK48776.1| ATP synthase F1, beta subunit [Shewanella baltica OS223]
 gi|304348897|gb|EFM13312.1| ATP synthase F1, beta subunit [Shewanella baltica OS183]
 gi|306911341|gb|EFN41767.1| ATP synthase F1, beta subunit [Shewanella baltica BA175]
 gi|315269806|gb|ADT96659.1| ATP synthase F1, beta subunit [Shewanella baltica OS678]
          Length = 463

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 188/411 (45%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+   N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKIVGEGPCN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID    +G+ +    I    P 
Sbjct: 60  GSSDGLRRGLEVVNSGSPITVPVGTATLGRIMNVLGEPIDEAGPIGEEE-RYVIHRTAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDED-KTTVFRARKIERFLSQP 406


>gi|15600749|ref|NP_254243.1| F0F1 ATP synthase subunit alpha [Pseudomonas aeruginosa PAO1]
 gi|107104658|ref|ZP_01368576.1| hypothetical protein PaerPA_01005737 [Pseudomonas aeruginosa PACS2]
 gi|116053707|ref|YP_794034.1| F0F1 ATP synthase subunit alpha [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152988258|ref|YP_001351669.1| F0F1 ATP synthase subunit alpha [Pseudomonas aeruginosa PA7]
 gi|218894659|ref|YP_002443529.1| F0F1 ATP synthase subunit alpha [Pseudomonas aeruginosa LESB58]
 gi|254237768|ref|ZP_04931091.1| ATP synthase alpha chain [Pseudomonas aeruginosa C3719]
 gi|296392423|ref|ZP_06881898.1| F0F1 ATP synthase subunit alpha [Pseudomonas aeruginosa PAb1]
 gi|313111493|ref|ZP_07797294.1| ATP synthase alpha chain [Pseudomonas aeruginosa 39016]
 gi|81539356|sp|Q9HT18|ATPA_PSEAE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|122256273|sp|Q02DF2|ATPA_PSEAB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|166990360|sp|A6VF34|ATPA_PSEA7 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739926|sp|B7V793|ATPA_PSEA8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|9951896|gb|AAG08941.1|AE004967_12 ATP synthase alpha chain [Pseudomonas aeruginosa PAO1]
 gi|115588928|gb|ABJ14943.1| ATP synthase alpha chain [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169699|gb|EAZ55210.1| ATP synthase alpha chain [Pseudomonas aeruginosa C3719]
 gi|150963416|gb|ABR85441.1| ATP synthase F1, alpha subunit [Pseudomonas aeruginosa PA7]
 gi|218774888|emb|CAW30706.1| ATP synthase alpha chain [Pseudomonas aeruginosa LESB58]
 gi|310883796|gb|EFQ42390.1| ATP synthase alpha chain [Pseudomonas aeruginosa 39016]
          Length = 514

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 185/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G I S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIEKLDVASQARNEGTIVSVSDGIVRIYGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGEYQGLAEGMNAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPID-AKATDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L      +  D   K +   +G++   +   +     +     ++VV A++ ES  L+ 
Sbjct: 178 ALAVDAIINQKDSGIKCVYVAIGQKQSTIANVVRKLEENGALANTIVVAASASESAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|55977138|gb|AAV68359.1| FliI [Herminiimonas arsenicoxydans]
 gi|193222344|emb|CAL62030.2| flagellum-specific ATP synthase [Herminiimonas arsenicoxydans]
          Length = 471

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 152/428 (35%), Positives = 224/428 (52%), Gaps = 26/428 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           +  G I+ +  +      L   + +G        N   +  +V+    D +++ P    E
Sbjct: 33  LVSGRITRVAGLVMEAVGL--KLAVGSACTIPLANGARIEAEVVGFEDDRLFLMPQSDVE 90

Query: 80  EISLGDLVFHWGRFR---------------------ISPSACWCGRVINALGKPIDGDDS 118
            I  G  VF     +                     +       GRV++  G+P+D    
Sbjct: 91  GIVPGTRVFPVEVVQSLPKPGAVSHPRRRPSDRTRHLPVGMELLGRVLDGAGRPLDSLGP 150

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L     S  +  +    + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 151 LHAT-HSGPLNVRAANPLTRAPITDVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVLL 209

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D  P++R      
Sbjct: 210 GMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARSVVVAAPADTPPLMRLQGAAY 269

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              IAE+F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 270 TTAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 329

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  ++  G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVLNRSLAE G YP +D   S+
Sbjct: 330 GNGKEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRSLAEAGHYPAIDIEQSI 389

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      + + +K    L  L  R++  RD+  +G Y  G D +LD+A+     I  FL
Sbjct: 390 SRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSAGSDPVLDEAIALNTKIESFL 449

Query: 418 KQSPSDLS 425
           +Q  ++ S
Sbjct: 450 QQDITERS 457


>gi|33440422|gb|AAQ19119.1| ATPase alpha subunit [Trichopus zeylanicus]
          Length = 379

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/385 (23%), Positives = 158/385 (41%), Gaps = 23/385 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD------------KVIISLVGERGREVREFIEDYLGD 212
            +      GK+ +      +                  +   +G++   V + ++     
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTKYMRETLYCVYVAIGQKRSTVAQLVQILEEA 177

Query: 213 NL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++ 
Sbjct: 178 NALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSL 237

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVR 329
                P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V 
Sbjct: 238 LLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVI 297

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           SI DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   +
Sbjct: 298 SITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSSKLELAQYRE---V 354

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIY 414
                +   +D      +++   + 
Sbjct: 355 AAFAQFGSDLDAATQALLNRGARLT 379


>gi|332980986|ref|YP_004462427.1| ATP synthase F1 subcomplex subunit alpha [Mahella australiensis
           50-1 BON]
 gi|332698664|gb|AEE95605.1| ATP synthase F1 subcomplex alpha subunit [Mahella australiensis
           50-1 BON]
          Length = 512

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 181/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E + +   V+  GY++        +  L ++    + +      +D  G  + 
Sbjct: 10  SILRQEIEGFEQKTHVEDTGYVTQYNDGIAIIYGL-EHCMSNEMLDF---GNDVYGLAMN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +N D V    + +  +I  G  V   GR   +       GR ++AL +PIDG   +   D
Sbjct: 66  LNEDSVGAVLLDMSSDIKEGTRVKRTGRVMSVPVGNALIGRTVDALCRPIDGKGPIL-SD 124

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            S  I +  PP ++RQ V    +TGI  ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 125 KSRPIENPAPPIIDRQPVSVPLQTGIVSIDSMIPIGRGQRELIIGDRQTGKTAIALDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++     +          +  +V+V+A++ ES  L+ + P  A  
Sbjct: 185 NQKDQDVICIYVGIGQKASSTAQLAHTLDEFGAMDYTVMVLASASESAALQYVCPYAACA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F   G +VL+I D +++ A + R ++      P    +P  VF    RLLER    
Sbjct: 245 IAEEFMYNGKDVLIIYDDLSKHAVAYRTLSLLLRRPPGREAFPGDVFYLHSRLLERSARL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           ++    G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SVS
Sbjct: 305 DERLGGGSMTALPIIETLAGDISAYIPTNVISITDGQIYLENELFLAGVKPAVNVGLSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+  +L   + ++ E   +     +   +D    + + +   I + LK
Sbjct: 365 RVGGAAQTKAMKKIAGTLRLELAQYRE---LAAFAQFGAELDDNTRRRLARGERITEMLK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QEQ 424


>gi|238793334|ref|ZP_04636960.1| secretion system apparatus ATP synthase ssaN [Yersinia intermedia
           ATCC 29909]
 gi|238727303|gb|EEQ18831.1| secretion system apparatus ATP synthase ssaN [Yersinia intermedia
           ATCC 29909]
          Length = 433

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 157/422 (37%), Positives = 225/422 (53%), Gaps = 12/422 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G I  +             V LG+       + D L +V+ I      + P     
Sbjct: 15  IAYRGPILDVGPTLLRANL--PGVALGELCRI--ASPDMLAEVVAIEQQTALLSPFTSSA 70

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   R+       GRV++ LG  +DG  SL       E+  + P  + R
Sbjct: 71  GLRSGQWVSPLGHSHRVKVGPSLLGRVLDGLGGAMDGGPSLIGH--WRELDCQPPEPLAR 128

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q + +   TGIR ID       GQR+G+FA +G+GKS+LLSM       D ++++L+GER
Sbjct: 129 QPIRQILTTGIRAIDGVLSCGEGQRVGIFAAAGVGKSSLLSMLCAGSNADVMVLALIGER 188

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF++     +   ++VVVVATSD   + R     TA T+AEYF  +G  VLL++D
Sbjct: 189 GREVREFLDQVLTPETRARTVVVVATSDRPALERLKGIYTATTVAEYFRERGLKVLLMVD 248

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REI   +GELP A  +P SVF+ LPRLLER G SE   G+ITA  +VLV+G
Sbjct: 249 SLTRYARAAREIGLAAGELPAAGSFPPSVFAALPRLLERAGNSE--CGSITAFYTVLVEG 306

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+P+AD VRS+LDGHIVL+R LA  G YP +D  ASVSR+  +  + +   L   L 
Sbjct: 307 DDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVTVEHLALAQKLR 366

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV--FQEITK 435
            +   ++E   +  +G Y+ G D   D A+ + P I  FL+Q  +     D        +
Sbjct: 367 QIQACYQEIELLVRVGEYQAGQDPQADDALQRYPKICAFLQQENALSCHSDAVSLNHTLE 426

Query: 436 KL 437
           +L
Sbjct: 427 QL 428


>gi|223667966|gb|ACN11581.1| F1-ATPase alpha subunit [Epistephium lucidum]
          Length = 420

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 161/407 (39%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVFFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGMGALSDHE-RRRVEVKAPGIIERQSVREPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGE 197
            + +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 FKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMHSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L+ MAP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANAFSYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|20146576|gb|AAM12442.1| ATP synthase alpha subunit [Polyspora axillaris]
          Length = 392

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 23/400 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  
Sbjct: 1   GRVVSVXDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI--T 308
           + L+I D +++ A + R+++      P    +P  V +   RLLER      + G    T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVINLHSRLLERAAKRSDQTGPGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
            K++  S    + ++ E   +  +  +   +D      ++
Sbjct: 356 MKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLN 392


>gi|209515776|ref|ZP_03264639.1| ATP synthase F1, beta subunit [Burkholderia sp. H160]
 gi|209503803|gb|EEA03796.1| ATP synthase F1, beta subunit [Burkholderia sp. H160]
          Length = 464

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRETMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G    +       GR+++ LG+PID    +   + +  I  K P 
Sbjct: 61  GASDGLRRGTVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPIS-SETTRAIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDQLSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 YSITRGVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 407


>gi|311696570|gb|ADP99443.1| ATP synthase subunit beta [marine bacterium HP15]
          Length = 464

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D ++ +G  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGQIVQIIGAVIDVEFPRDSVPKVYDALLLEGGETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G    + G    +       GR+++ LG+PID    +G+ +    I  K P   ++
Sbjct: 60  GLKRGLKAENTGNPISVPVGTQTLGRIMDVLGRPIDEAGEIGEEE-RWAIHRKAPGYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 AASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGQLQERI--TSTKNGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  S LD  +VL+R +A +G YP +DPL S SR  D      +  ++ 
Sbjct: 297 VPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDPLIIGQEHYEVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQTNLQRYKELKDIIAILGMDELSEED-KLTVARARKIERFLSQP 402


>gi|167030910|gb|ABZ05778.1| HrcN [Pectobacterium carotovorum subsp. carotovorum]
          Length = 455

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 233/422 (55%), Gaps = 13/422 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V + G + +++ +     C      +GD   V +  +S  + +V+  + D  ++  +G  
Sbjct: 28  VEKKGRVMAVSGILL--ECSLPQARIGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGAL 85

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI-DGDD-----SLGKGDLSMEIMSK 131
           + I+ G  V        I  S    G V++  G+ + DG +            +  ++  
Sbjct: 86  DGIAQGAAVTPLYQPHCIQVSDRLLGSVLDGFGRALEDGGESAFVEPGHATGRTQPVLGD 145

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PP  +R R+ + F TG+R +D    +  GQR+G+FAG+G GK+TLL+  AR+   D ++
Sbjct: 146 APPPTSRPRISQPFPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIV 205

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
             L+GERGRE+REF+  +   +   ++V+V +TSD S + R  A  TA  IAE + ++G 
Sbjct: 206 FGLIGERGRELREFLDHELDDELRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGR 265

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
            VLLI+DS+TRFA + REI    GE     G P SV++ LPRL+ER G +E   G ITA+
Sbjct: 266 QVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQTED--GAITAL 323

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVL++ D+ NDP+AD VRS++DGHIVL R LAE+G YP +D LAS+SR        D  
Sbjct: 324 YSVLIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHT 383

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +    +  L+  +++   +  +G Y+PG D++ D AV+    I  FL+QS  +     V 
Sbjct: 384 RNAGGVRRLMAAYKQVEMLIRLGEYQPGHDVLTDSAVNAQAEITQFLRQSMREPMPYGVI 443

Query: 431 QE 432
           Q+
Sbjct: 444 QQ 445


>gi|289706360|ref|ZP_06502718.1| ATP synthase F1, alpha subunit [Micrococcus luteus SK58]
 gi|289556855|gb|EFD50188.1| ATP synthase F1, alpha subunit [Micrococcus luteus SK58]
          Length = 555

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/430 (20%), Positives = 169/430 (39%), Gaps = 23/430 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S       V  L   V   + +  +       G    ++   + +  +G  +E
Sbjct: 41  TEVGRVISAADGIARVEGL-PSVMANELLRFENG---IQGLAQNLDTREIGVVVLGEFQE 96

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G  V   G    +     + GRV++ LG+PID    + + +    +  + P    R+
Sbjct: 97  IREGMEVQRTGEILSVPVGDAFLGRVVDPLGQPIDDLGPI-EAEGRRALELQAPTVTERK 155

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDK----- 189
            V +  +TG++ ID   P+  GQR  +      GK      T+L+  A  +  D      
Sbjct: 156 SVHEPLQTGMKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTILNQKANWESGDVEKQVR 215

Query: 190 VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +   VG++   +             + + +V + + +    + +AP     I +++   
Sbjct: 216 CVYVAVGQKASTIAGVRATLEEHGALEYTTIVASPASDPAGFKYLAPYAGSAIGQHWMYG 275

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--N 306
           G +VL+I D +++ A + R ++      P    YP  VF    RLLER      E G  +
Sbjct: 276 GKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDEMGAGS 335

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +T +  +    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A  
Sbjct: 336 MTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAQV 395

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLS 425
              KK+  +L   + ++ + +       +   +D    + + +   + + LKQ   S   
Sbjct: 396 KAMKKVSGTLKLDLAQYRDQQ---AFSMFASDLDPATRRQLARGERLMELLKQPQYSPYP 452

Query: 426 SEDVFQEITK 435
            E+    I  
Sbjct: 453 VEEQVVSIWA 462


>gi|78778279|ref|YP_394594.1| flagellum-specific ATP synthase [Sulfurimonas denitrificans DSM
           1251]
 gi|78498819|gb|ABB45359.1| ATPase FliI/YscN [Sulfurimonas denitrificans DSM 1251]
          Length = 436

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/426 (39%), Positives = 238/426 (55%), Gaps = 9/426 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYIC 73
           +K   V  G +  I +   T   LS  V + D V      S  + +G V  I+  I +I 
Sbjct: 12  NKKYSVAFGEVVKINATVITARGLS--VSISDIVKIISNESAQETIGMVTEIDGLIFFIT 69

Query: 74  PVGIGEEISLGDLVF--HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           P    E    GD VF    G   I  S+   GRV++   +PIDG  S+    LS  I+  
Sbjct: 70  PFSFVEGFRSGDRVFLDQTG-LNIPVSSSLLGRVVDPFMRPIDGKGSINDSKLS-PIIKA 127

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
              AM R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +
Sbjct: 128 PIAAMKRGMIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGANAPIKV 187

Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           ++L+GERGREV EFIE  LG NL+ +V+VVATSD+SP++RK     A+++AE+F  +G +
Sbjct: 188 VALIGERGREVPEFIEKNLGGNLENTVIVVATSDDSPLMRKYGAFAAMSVAEFFKDQGLD 247

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL I+DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E  KG+ITA  
Sbjct: 248 VLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAGKEEG-KGSITAFF 306

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++GD+  DPIAD  RSILDGHIVL+R + + G YPPV  L S SR+ +   + +  +
Sbjct: 307 TVLIEGDDMGDPIADQSRSILDGHIVLSREMTDFGIYPPVHILNSASRVMNDIITPEHLR 366

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
            V     L    +E   +  IG Y  G D  LD+A+ +   +  FL Q+ S  S  D   
Sbjct: 367 AVQKFRRLYTLLKENEVLIRIGAYTKGSDSELDEAMAKKSEMEKFLMQNSSTQSDFDETV 426

Query: 432 EITKKL 437
           E   KL
Sbjct: 427 ETLLKL 432


>gi|45653|emb|CAA41372.1| F1 subunit [Propionigenium modestum]
          Length = 410

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 170/367 (46%), Gaps = 10/367 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
             + +  + V    +G    +  GD V   G+   +       GRV+N+LG+PIDG   L
Sbjct: 1   MALNLEENNVGAVILGDPTGVKEGDEVRATGQIAAVGAGEALLGRVVNSLGEPIDGKGEL 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
            K +  M +  K    ++R+ V +  +TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 61  -KTEKMMPLDRKAYGIISRKPVHEPLQTGIKSIDGMVPIGRGQRELIIGDRQTGKTAVAL 119

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
            ++  + D   K I   +G++   V + ++        + ++VV AT+ ES  L+ MAP 
Sbjct: 120 DAIINQKDTGVKCIYVAIGQKRSTVAQIVKRLEDAGALEYTIVVAATASESAPLQYMAPY 179

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T V++ EYF  KG++VL++ D +++ A + RE++      P    +P  VF    RLLER
Sbjct: 180 TGVSMGEYFMDKGEHVLIVYDDLSKHAVAYREMSLLLKRPPGREAFPGDVFYLHSRLLER 239

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 E   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P ++  
Sbjct: 240 AAKLSDEIGAGSITALPIIETQAGDVSAYIPTNVISITDGQIFLDSQLFNSGFRPAINAG 299

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     K++ + +   + ++ E   +     +   +D      + +   I 
Sbjct: 300 ISVSRVGGAAQIKAMKQVAAQVKLELAQYNE---LLTFAQFGSDLDKATLAQLERGHRIM 356

Query: 415 DFLKQSP 421
           + LKQ  
Sbjct: 357 EILKQEQ 363


>gi|261749170|ref|YP_003256855.1| F0F1 ATP synthase subunit alpha [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497262|gb|ACX83712.1| F0F1 ATP synthase subunit alpha [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 526

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 178/443 (40%), Gaps = 36/443 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL++   ++ + + G I  +         L+  V  G+ V     ++   G  + +  D
Sbjct: 15  KQLSDFQYESKLSESGVIVQVGDGVARSVGLN-SVFSGEIVEF---HTGIKGIALNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I  V   +++  GD+V   G+   I       GRV++ LG PIDG   +      M 
Sbjct: 71  HVSIVLVNSSKDVKEGDIVKRTGKVLSIPVGEGMLGRVVDVLGNPIDGKGPIEGKLFDMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-------LLSM 180
           +  K P  + R+ V++  +TGI+ ID   P+  GQR  +      GK+T           
Sbjct: 131 LERKAPGVIYREPVKEPLQTGIKFIDAMIPIGRGQRELIIGDRQTGKTTIAIDTILNQKE 190

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
           +  +D     I   + ++G  +    +          +V+V A + +   ++  AP +  
Sbjct: 191 WYNTDKQVYCIYVAISQKGSTIARITKTLEDKGAMSYTVIVAANASDPASIQVFAPFSGT 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G + L+I D +++ A S RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRSSLVIYDDLSKQAVSYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
             K+                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 IIKDTKIAQKMNDIPESIKEYVKGGGSLTALPIIETQSGDVSSYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           + L   G  P ++   SVSR+   A     +K+  +L     +F E         +   +
Sbjct: 371 KDLFHSGVRPAINESISVSRVGASAQIQSMRKISGTLKLDQAQFRELE---SFSKFGSEL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPS 422
           D I  + + +     + LKQ P 
Sbjct: 428 DPITMEIIEKGRRNIEILKQPPH 450


>gi|50083467|ref|YP_044977.1| F0F1 ATP synthase subunit alpha [Acinetobacter sp. ADP1]
 gi|81393961|sp|Q6FFK2|ATPA_ACIAD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|49529443|emb|CAG67155.1| membrane-bound ATP synthase , F1 sector, alpha-subunit
           [Acinetobacter sp. ADP1]
          Length = 519

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 178/447 (39%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDEPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+     K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 183 AMAIDAIIAQKHSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSADYVEKFTNGAVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|187925863|ref|YP_001897505.1| F0F1 ATP synthase subunit beta [Burkholderia phytofirmans PsJN]
 gi|187717057|gb|ACD18281.1| ATP synthase F1, beta subunit [Burkholderia phytofirmans PsJN]
          Length = 464

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V        Q   + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRDQMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G+   +       GR+++ LG+PID    +   D+   I  K P 
Sbjct: 61  GASDGLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIN-SDVVRGIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 YSITRGVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 407


>gi|332531126|ref|ZP_08407040.1| ATPase FliI/YscN [Hylemonella gracilis ATCC 19624]
 gi|332039411|gb|EGI75823.1| ATPase FliI/YscN [Hylemonella gracilis ATCC 19624]
          Length = 535

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 159/448 (35%), Positives = 233/448 (52%), Gaps = 37/448 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           A+      +  +  GG ++ +T +      +   V     +   G+ S  L +V+    D
Sbjct: 37  ARQQASAPQTTLDSGGTLTRLTGLVLEAAGIRASVGSQCLITQPGQ-SPVLAEVVGFAGD 95

Query: 69  IVYICPVGIGEEISLGDLVFHW----------------------------------GRFR 94
             Y+ P G  + +S G  V                                     G+ R
Sbjct: 96  RAYLMPAGDVQGLSSGATVMPTAPYVPPLRLGADWTGTAEGAAVRPAASPSHLMASGQLR 155

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +       GRV++A G+P+D    L    +S  +      AM+R  V +   TG+R I+ 
Sbjct: 156 LPLGEGLLGRVVDAQGQPMDHRGPLSNV-VSRPLDRSPLNAMDRAPVREPLDTGVRSINA 214

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213
              +  GQR+G+FAG+G+GKS LL M AR    + +++ LVGERGREV+EFIED LG+  
Sbjct: 215 LLTVGRGQRLGLFAGAGVGKSVLLGMMARYTEAEIIVVGLVGERGREVKEFIEDILGEEG 274

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
            ++SVVV A +D  P+LR  A   A  +AEYF  +G +VLL++DS+TR+A + REIA   
Sbjct: 275 RRRSVVVAAPADAPPLLRLQAAGYATGVAEYFRDQGKHVLLLMDSLTRYAMAQREIALAV 334

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           GE P  +GYP S F++LP+L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILD
Sbjct: 335 GEPPATKGYPPSCFAKLPQLVERSGNGLNGVGSITAFYTVLAEGDDQQDPIADAARAILD 394

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           GHIVL R+LAE G YP +D   S SR+     S +  +L      +  R+E  RD+  IG
Sbjct: 395 GHIVLTRALAEAGHYPAIDIAQSASRVMHNVVSKEHFELARQFRGISSRYERGRDLIQIG 454

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            Y PG D  LD+++     +  FL+Q  
Sbjct: 455 AYVPGADPGLDESIRLHEPMMAFLQQDM 482


>gi|241763652|ref|ZP_04761702.1| ATPase FliI/YscN [Acidovorax delafieldii 2AN]
 gi|241367127|gb|EER61493.1| ATPase FliI/YscN [Acidovorax delafieldii 2AN]
          Length = 464

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 153/428 (35%), Positives = 230/428 (53%), Gaps = 24/428 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQVIRINLDIVYICPVGIGEE 80
             G ++ +T +      +   V +G   + Q       L +V+  + D  ++ P G    
Sbjct: 28  TRGTLTRLTGLVLEAVGI--RVPVGSQCMVQMPGHAPVLAEVVGFSADRAFLMPAGDIHG 85

Query: 81  ISLGDLVF-------------------HWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +S G  V                      G  R+       GRV+++ G P+D    +  
Sbjct: 86  LSSGASVVPAAPYVPMPRLGEPPRPVQRAGVLRLPMGEGLLGRVVDSQGLPLDHGGPVQD 145

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              S  +  +   AM+R  V +   TG+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 146 V-ASEPMDRRQINAMDRDPVREPLDTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLGMM 204

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D +++ L+GERGREV+EF+ED LG+    +SVVV A +D  P+LR      A  
Sbjct: 205 ARYTRADVIVVGLIGERGREVKEFVEDILGEEGRARSVVVAAPADAPPLLRMQGAAYATA 264

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP+L+ER G  
Sbjct: 265 VAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNG 324

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE G +P +D   S SR+
Sbjct: 325 LHGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRALAETGHFPAIDIEQSASRV 384

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +   L      +  R++++RD+  +G Y  G D  LD+A+   P +  FL+Q 
Sbjct: 385 MHNVVSREHFDLARRFRAVYSRYQKSRDLVQVGAYMSGSDPALDEAIRLQPQMAAFLQQD 444

Query: 421 PSDLSSED 428
             D +S +
Sbjct: 445 MFDATSME 452


>gi|186886329|gb|ACC93567.1| ATPase F1 alpha subunit [Juncus arcticus var. mexicanus]
          Length = 369

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 355 FAQFGSDLDAAXQ 367


>gi|172063763|ref|YP_001811414.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
 gi|171996280|gb|ACB67198.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria MC40-6]
          Length = 461

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 222/421 (52%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 41  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 98

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 99  AGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGAAWVSTQQDPPNPLA 157

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 158 RKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 217

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 218 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 277

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G      G+ITA+ +VLV+
Sbjct: 278 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAGQGAT--GSITALYTVLVE 335

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 336 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQSAARV 395

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q   +    D       K
Sbjct: 396 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQGSHEDVRFDALLAKLTK 455

Query: 437 L 437
           L
Sbjct: 456 L 456


>gi|34539291|gb|AAQ74529.1| F1-ATPase alpha subunit [Epimedium grandiflorum]
          Length = 417

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  +   I   G    I  GDLV
Sbjct: 1   SVGDEIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENXXIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +       K++       +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTXKTSXAIDTILNQXQMNSRGPWXSETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +  +  +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|34498589|ref|NP_902804.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
 gi|34104443|gb|AAQ60801.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC
           12472]
          Length = 466

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 153/432 (35%), Positives = 224/432 (51%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  +T +      +   V     V+          +V+  + D V++ P+     +  
Sbjct: 30  GRLVRVTGMVMEAVGIKLPVGSACRVML-ADAHSVEAEVVGFSGDKVFLMPLTNVHGLLP 88

Query: 84  GDLVFHWGRF----------------------RISPSACWCGRVINALGKPIDGDDSLGK 121
           G  V     F                      ++   A   GRV+++LG+P+DG   +  
Sbjct: 89  GTPVLPLPSFNPPRYGSEPGAAQAASNGAAGRQVPVGASLLGRVLDSLGRPLDGLGPIHP 148

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            D    + S+    ++R  V      G+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 149 -DAWFPLYSQPMNPLHRTPVHDVLDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVLLGMM 207

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D V++ L+GERGREV++FIE+ LG+    +SVVV A +D  P++R      A  
Sbjct: 208 ARFTKADVVVVGLIGERGREVKDFIENILGEEGRARSVVVAAPADMPPLMRLHGAAYATA 267

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF S+G +VLL++DS+TRFA + REIA   GE PV RGYP SVF+ LP+L+ER G  
Sbjct: 268 LAEYFRSQGLDVLLLMDSVTRFAMAQREIALAIGEPPVTRGYPPSVFARLPQLIERAGNG 327

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E+  G+IT   +VL +GD+  DPIADS R+ILDGH VL+R LAE G YP +D   S+SR+
Sbjct: 328 EEGGGSITGFYTVLSEGDDQQDPIADSARAILDGHFVLSRDLAEAGHYPAIDIEQSISRV 387

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                   +  L      L  R++  RD+  +G Y  G D +LD A+ +   +  FL Q 
Sbjct: 388 MVDVVPQQQMDLARHFKQLYSRYQRNRDLISVGAYVSGSDPVLDDAMRRQLPMVSFLTQP 447

Query: 421 PSDLSSEDVFQE 432
             +        E
Sbjct: 448 MHESHDYASCCE 459


>gi|313497799|gb|ADR59165.1| FliI [Pseudomonas putida BIRD-1]
          Length = 451

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 158/429 (36%), Positives = 233/429 (54%), Gaps = 15/429 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L T A+  E  ++ +V   G +  +  +      L     +G   +    +S      
Sbjct: 10  KRLGTYAEAIELPAQPIV--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPVQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   V++ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 66  EAEVMGFSGPKVFLMPVGSIVGIAPGARVVPLDDGGRL--PMGMSMLGRVLDGAGRALDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 KGGM-KAEDWVPMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    + +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G  E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  
Sbjct: 303 ERAGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+  +   AD  +       L  R  ++RD+  +G Y  G D   D A+     + 
Sbjct: 363 ASISRVMPQVVDADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLV 422

Query: 415 DFLKQSPSD 423
           +FL+Q   +
Sbjct: 423 EFLRQGLRE 431


>gi|229829782|ref|ZP_04455851.1| hypothetical protein GCWU000342_01879 [Shuttleworthia satelles DSM
           14600]
 gi|229791771|gb|EEP27885.1| hypothetical protein GCWU000342_01879 [Shuttleworthia satelles DSM
           14600]
          Length = 598

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 115/432 (26%), Positives = 188/432 (43%), Gaps = 20/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           MQ+ +E     A+        + G + ++     T++    +V  G+ V+         G
Sbjct: 105 MQEAVEAFHLAAK------ASEVGTVETVGDGIVTISGF-DHVQYGEIVLFDNG---VKG 154

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            +  I  D V          I  G  V   G R  I  S  + GRV++ALG PIDG  ++
Sbjct: 155 MIQDIKSDSVGAILFDQEGTIGEGSHVTGTGKRAGIPVSDAYLGRVVDALGNPIDGGVAI 214

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D    I ++ P  ++RQ V    +TGI  ID   P+  GQR  +      GK+ + +
Sbjct: 215 KASDYR-PIENEAPGIIDRQPVNVPLQTGILAIDSMFPIGRGQRELIIGDRQTGKTAIAT 273

Query: 180 MFARSDCFDKVI--ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
               +      I     +G++   +   +      D +  SVVV +T+ +   L+ +AP 
Sbjct: 274 DAILNQKGKNCICIYVAIGQKSSTIAGIVNTLQAHDAMDYSVVVASTASDPAPLQYIAPY 333

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER
Sbjct: 334 AATALAEYFMHKGKDVLIVYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLER 393

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +E   G+ITA+  +     + +  I  +V SI DG I L + L  EG+ P V+  
Sbjct: 394 CARLSEELGGGSITALPIIETQDGDVSAYIPTNVISITDGQIFLEQDLFFEGQRPAVNVG 453

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK   SL   + ++ E +   +   +   +D      + Q  ++ 
Sbjct: 454 LSVSRVGGAAQTKAMKKATGSLRIDLAQYREMQ---VFTQFSSDLDEATKNQLAQGAVLM 510

Query: 415 DFLKQSPSDLSS 426
           + LKQ      S
Sbjct: 511 ELLKQPQGSPLS 522


>gi|154509264|ref|ZP_02044906.1| hypothetical protein ACTODO_01789 [Actinomyces odontolyticus ATCC
           17982]
 gi|293189732|ref|ZP_06608448.1| ATP synthase F1, alpha subunit [Actinomyces odontolyticus F0309]
 gi|153798898|gb|EDN81318.1| hypothetical protein ACTODO_01789 [Actinomyces odontolyticus ATCC
           17982]
 gi|292821322|gb|EFF80265.1| ATP synthase F1, alpha subunit [Actinomyces odontolyticus F0309]
          Length = 545

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/445 (21%), Positives = 172/445 (38%), Gaps = 24/445 (5%)

Query: 7   TLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L    E Y    V   + G++         V  L       + +  +      LG  + 
Sbjct: 14  ALDSFMESYRPADVATEEVGHVIETADGIAHVEGL-PGTMANELLRFEDG---TLGLAMN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   +    +G    I  G +V   G    +     + GR ++ LG+PIDG   +   D
Sbjct: 70  LDQREIGAVVLGDFGGIEEGQVVHRTGEVLSVPVGDGYLGRTVDPLGRPIDGLGEITDLD 129

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  M R+ V +   TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 130 GRRALELQAPGVMARKSVHEPLATGLKAIDSMIPVGRGQRQLIIGDRKTGKTAIALDTIL 189

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +        D     + I   +G++G  +               + +V + + +    + 
Sbjct: 190 NQRENWKSGDPNKQVRCIYVAIGQKGSTIASVRSTLEDAGAMEYTTIVASPASDPAGYKY 249

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           MAP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 250 MAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 309

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 310 LLERCAKLSDALGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNSNQRPA 369

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   R +     +   +D    + + + 
Sbjct: 370 VDVGISVSRVGGAAQPKAMKKVAGTLKLTLAQY---RSMAAFAMFASDLDAATRRQLTRG 426

Query: 411 PIIYDFLKQSPS-DLSSEDVFQEIT 434
             + + LKQ  S   + ED    I 
Sbjct: 427 ERLMELLKQPQSTPYAMEDQVASIW 451


>gi|308173586|ref|YP_003920291.1| flagellar-specific ATPase [Bacillus amyloliquefaciens DSM 7]
 gi|307606450|emb|CBI42821.1| flagellar-specific ATPase [Bacillus amyloliquefaciens DSM 7]
 gi|328553482|gb|AEB23974.1| flagellum-specific ATP synthase [Bacillus amyloliquefaciens TA208]
 gi|328911727|gb|AEB63323.1| flagellar-specific ATPase [Bacillus amyloliquefaciens LL3]
          Length = 438

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 161/418 (38%), Positives = 236/418 (56%), Gaps = 10/418 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN---SDNLGQVIRINLDIVYI 72
           + +   + G +  +  +   +        +GD  +   K         +V+    + + +
Sbjct: 12  TADPYKRYGKVKRVIGLM--IESKGPESSIGDVCLIYPKGHAKKAIKAEVVGFQDENILL 69

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      I+ G +V   G   RI   A   G+V++A G+P+DG  +L KG   +     
Sbjct: 70  MPYLEAASIAPGSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGR-ALPKGLSPVSTEQP 128

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ M A+    D  I
Sbjct: 129 PPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNI 188

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+LVGERGREVREFI +D   + LK+S+VVVATSD+  ++R  A  TA  IAEYF  KG 
Sbjct: 189 IALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGR 248

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G +E  +G ITA 
Sbjct: 249 NVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANE--QGTITAF 306

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+          
Sbjct: 307 YTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNISDPAHI 366

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           K  +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + +  +
Sbjct: 367 KAANKFRDLLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTEEPAQLE 424


>gi|238796934|ref|ZP_04640438.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
 gi|238719194|gb|EEQ11006.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
          Length = 456

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 155/419 (36%), Positives = 237/419 (56%), Gaps = 15/419 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVGI 77
           Q G ++ +T +      L   + +G   + +      +     +V+  N +I+Y+ P+  
Sbjct: 25  QYGKLTRVTGLVMEAVGL--KLPIGTLCIVERNTGQGMQKVESEVVGFNGEILYLMPLEN 82

Query: 78  GEEISLGDLVFHWGR-------FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            + I  G  V+  G         ++       GRV++A  +P+DG    G    +  + +
Sbjct: 83  VDGILPGARVYAQGSGADIAHGKQLPLGPELLGRVLDASARPLDGLPPPGCAKQA-PLFT 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           +    + R  ++     G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +
Sbjct: 142 QPVNPLLRDPIKDVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTKADVI 201

Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ L+GERGREV++FIE+ LG+  L +SVV+ A +D SPILR    + A  IAE F  +G
Sbjct: 202 VVGLIGERGREVKDFIENILGEEGLSRSVVIAAPADVSPILRMQGAVYATRIAEDFRERG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G   KE G+ITA
Sbjct: 262 MDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVKEGGSITA 321

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR   +      
Sbjct: 322 FYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIDQAH 381

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            + V +   L+  ++  RD+  +G Y  G D +LDKA+   P +  +L+Q+  + S  +
Sbjct: 382 YRKVQNFKQLLSSYQRNRDLVSVGAYAAGSDPLLDKAIRLYPEMETYLQQAIHESSGYE 440


>gi|78043094|ref|YP_361338.1| F0F1 ATP synthase subunit beta [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|118573518|sp|Q3A946|ATPB_CARHZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77995209|gb|ABB14108.1| ATP synthase F1, beta subunit [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 473

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 111/386 (28%), Positives = 187/386 (48%), Gaps = 20/386 (5%)

Query: 51  HQGKNSDNLGQV-IRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSAC 100
            + ++ D   +V I + L++        V    +   + +  G  V   G    +     
Sbjct: 32  IRSEDQDTPTEVPINLTLEVAQHLGNNRVRAVAMSSTDGLVRGMKVVDTGAPITVPVGRP 91

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GR++N LG+PIDG   + + D    I    PP   +    +  +TGI+VID+  P   
Sbjct: 92  VLGRLLNVLGEPIDGKGPV-ESDHYYPIHRPAPPLEEQSTRAEILETGIKVIDLLVPFLK 150

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KK 216
           G +IG+F G+G+GK+ ++     +         + + VGER RE  +   +     +  K
Sbjct: 151 GGKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLDK 210

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275
           +++V    +E P +R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G 
Sbjct: 211 TIMVFGQMNEPPGVRLRVGLTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 270

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+ +L ERI  +   KG+IT+V +V V  D+  DP   +  + LD  
Sbjct: 271 MPSAVGYQPTLATEMGQLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDAT 328

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
           +VL+R +AE G YP VDPL S SR+ D      +  ++   +  ++ R++E +DI  I G
Sbjct: 329 VVLSRQIAELGIYPAVDPLDSTSRILDPHIVGEEHYQVARGVQRVLQRYKELQDIIAILG 388

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
                D      V +   +  FL Q 
Sbjct: 389 MDELSDED-KLIVARARKLQRFLSQP 413


>gi|68072343|ref|XP_678085.1| ATP synthase F1, alpha subunit [Plasmodium berghei strain ANKA]
 gi|56498436|emb|CAH94753.1| ATP synthase F1, alpha subunit, putative [Plasmodium berghei]
          Length = 547

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 101/434 (23%), Positives = 182/434 (41%), Gaps = 24/434 (5%)

Query: 6   ETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG---KNSDNLGQ 61
           + L +  E++  K    + GY+ S+         L+  V   + V       K++   G 
Sbjct: 42  KILEKKFENFDFKTSANEIGYVLSVGDGICRAFGLN-NVKSSELVEIHNEEDKSNITYGM 100

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              +  D V I   G    I  GD++    R           GRV++ALG  IDG+  + 
Sbjct: 101 ATNLEYDNVGIVIFGNDRNIKEGDIIKRTNRIIDVNVGYELLGRVVDALGNEIDGEKKIE 160

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG------- 173
             +   +I  K P  + R+ V +   TGI+ ID   P+  GQR  +      G       
Sbjct: 161 TKE-RRKIEVKAPGIIARKSVNESIITGIKCIDSLVPIGRGQRELIIGDRQTGKTAIAID 219

Query: 174 ---KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229
                  ++     +     +   +G++   + + +      D LK +++V +++ ++  
Sbjct: 220 AIIHQKNINDKVPDNEKVYCVYVAIGQKKSNIAKLVNLLKKYDALKYTIIVNSSASDASP 279

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP T   +AE+F     + L+I D +++ A + R+++      P    YP  +F  
Sbjct: 280 LQFLAPYTGCAMAEFFRRGN-HALIIYDDLSKQAVAYRQLSLLLRRPPGREAYPGDIFYI 338

Query: 290 LPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             +LLER        + G++TA+  +    ++ +  I  +V SI DG I L   L  +G 
Sbjct: 339 HSKLLERSSKLNDSLKGGSLTALPVIETLNNDVSAYIPTNVISITDGQIFLESELFYKGI 398

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     KKL SS+   + +F E   I     +   +D    K +
Sbjct: 399 IPAINVGLSVSRIGSSAQYKCMKKLSSSMKLELAQFRE---IVAFSQFGSDLDASTKKLI 455

Query: 408 HQVPIIYDFLKQSP 421
            +  I+ + LKQ  
Sbjct: 456 EKGKILTEILKQKQ 469


>gi|189017684|gb|ACD71511.1| F1-ATPase alpha subunit [Burmannia itoana]
          Length = 397

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 5   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 61

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 62  VVDALGVPIDGIGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 120

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 121 LIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 180

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 181 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 240

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 241 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 301 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 357

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 358 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 388


>gi|34539341|gb|AAQ74554.1| F1-ATPase alpha subunit [Japonolirion osense]
          Length = 416

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/408 (21%), Positives = 159/408 (38%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++    G+        S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNELQA-GEMXXFA---SGVKGXALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R  V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERXSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
            +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 176 XKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 236 FDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETDLFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                 + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 GXSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 400


>gi|283458319|ref|YP_003362938.1| F0F1-type ATP synthase subunit alpha [Rothia mucilaginosa DY-18]
 gi|283134353|dbj|BAI65118.1| F0F1-type ATP synthase, alpha subunit [Rothia mucilaginosa DY-18]
          Length = 548

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/446 (20%), Positives = 175/446 (39%), Gaps = 25/446 (5%)

Query: 7   TLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L + A  Y       V+ G + S +     V  L   V   + +  +      LG    
Sbjct: 21  ALNEFAASYEPGNAERVEVGRVVSASDGIARVEGL-PSVMANELLRFEDG---TLGLAQN 76

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   + +  +G    I  G +V   G    +     + GRV++ LG PID    + + +
Sbjct: 77  LDTRNIGVIVLGDFTGIEEGQVVHRTGEVLSVPVGDAYLGRVVDPLGNPIDDLGPI-EAE 135

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P    R+ V +  +TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 136 GRRALELQAPGVTQRKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIAIDTIL 195

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
           +        D     + I   VG++   +             + + +V + + ++   + 
Sbjct: 196 NQKDNWASGDPEKQVRCIYVAVGQKASTIAAVRHTLETRGALEYTTIVASPASDAAGFKY 255

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    R
Sbjct: 256 LAPYTGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 315

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++T    +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 316 LLERCAKLSDDLGAGSMTGFPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRPA 375

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A +   KK+  +L   + ++   R +     +   +D      + + 
Sbjct: 376 VDVGISVSRVGGAAQTKAMKKVSGTLKLELAQY---RAMEAFAMFASDLDDATKAQLTRG 432

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEITK 435
             + + L+Q   +  + E+    I  
Sbjct: 433 SRLTELLRQPQYTPYAVEEQVVSIWA 458


>gi|258544335|ref|ZP_05704569.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC
           15826]
 gi|258520415|gb|EEV89274.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC
           15826]
          Length = 459

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 191/408 (46%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      +      V  + D ++ +    D + +V + +   +V    +G  
Sbjct: 1   MSTGKIVQVIGAVVDIEFPEDAVPKINDALIAE--QGDTVFEVQQQLGDGVVRTITMGSS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V + G    +       GR++N LGK ID    + + +    I  K P    
Sbjct: 59  EGLVRGMEVKNTGEPITVPVGKATLGRIMNVLGKEIDHGPKI-EAEAYWGIHRKAPAYDE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 118 LANSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E    R    LT +T+AEYF  +G +VL
Sbjct: 178 VGERTREGNDFYYEMKESNVLDKVSLVYGQMNEPAGNRFRVALTGLTMAEYFRDEGRDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT++ +V
Sbjct: 238 FFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKL 372
            V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D     D   + 
Sbjct: 296 YVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGDEHYET 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E RDI  I G     +    + V++   I  FL Q 
Sbjct: 356 ARRVQGVLQRYKELRDIIAILGMDELSEED-KQVVYRARKIQRFLSQP 402


>gi|330831705|ref|YP_004394657.1| H(+)-transporting two-sector ATPase, F(1) subunit beta [Aeromonas
           veronii B565]
 gi|328806841|gb|AEB52040.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Aeromonas
           veronii B565]
          Length = 462

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 192/410 (46%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSDNLGQVIR-INLDIVYICPVG 76
           +  G+I  I      +      V        VV +G+    + +V + I   +V    +G
Sbjct: 1   MSNGFIVQIIGAVVDIEFPQNAVPQVYDALKVVSEGQGQGLVLEVQQQIGGGVVRCITMG 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G+  ++       GR++N LG+PID    +G+ +    I    P  
Sbjct: 61  SSDGLRRGLEVVNSGKSIQVPVGTATLGRIMNVLGEPIDEKGPIGEEEC-WSIHRAAPSY 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 120 EDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 179

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  + +  N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 180 AGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 239

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 240 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 297

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 298 AVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHY 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ETARGVQTVLQRYKELKDIIAILGMDELSEED-KLTVARARKIERFLSQP 406


>gi|294141005|ref|YP_003556983.1| ATPase [Shewanella violacea DSS12]
 gi|293327474|dbj|BAJ02205.1| ATPase, FliI/YscN family [Shewanella violacea DSS12]
          Length = 441

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 168/433 (38%), Positives = 239/433 (55%), Gaps = 11/433 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
             L    ++ +   V   G +  + S     T        G+  +          +VI +
Sbjct: 15  SRLLPSIQNQAVRTVRYFGKVQEVGSTLVRATL--PGAHQGELCLI---GHKLKSEVIAV 69

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             D V + P  +   +  G LV   G   ++   +   GRV++ LG  +DG   L   + 
Sbjct: 70  KGDEVLLSPFDVTSWLQTGALVEPMGHGHQVLLGSELLGRVVDGLGDVMDGY-PLDACEC 128

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
                   P  ++R  ++     GIR ID       GQRIG+FA +G GKSTLL M A  
Sbjct: 129 R-PNYGAAPNPLSRSLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKSTLLGMIASH 187

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D ++++LVGERGREVREFI  +   +   ++V+VVATSD  P+ R  A LTA TIAE
Sbjct: 188 CEADVIVLALVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLTATTIAE 247

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +G NVLL++DS+TRFA S REI+  +GE PV+ GYP SVF  L  L+ER GP+ K 
Sbjct: 248 YFRDQGKNVLLMVDSLTRFARSAREISLAAGEAPVSNGYPPSVFVNLSALVERAGPAAK- 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT V +VLV+GDN N+PIAD VRS+LDGHIVL+R LA  G YP +D  ASVSR+ D+
Sbjct: 307 -GSITGVYTVLVEGDNMNEPIADEVRSLLDGHIVLSRKLAGAGHYPAIDINASVSRVMDQ 365

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             + ++KK  + +  ++  ++E + +  +G Y  G D   D+AV +   I DFL+QS  +
Sbjct: 366 IVTQEQKKNAAKMRQMLALYDEVQLLLRVGEYVQGQDKQTDEAVMRYGAIKDFLRQSVDE 425

Query: 424 LSSEDVFQEITKK 436
            S  +V Q+    
Sbjct: 426 FSPYEVSQQQLAA 438


>gi|149193991|ref|ZP_01871089.1| F0F1 ATP synthase subunit beta [Caminibacter mediatlanticus TB-2]
 gi|149135944|gb|EDM24422.1| F0F1 ATP synthase subunit beta [Caminibacter mediatlanticus TB-2]
          Length = 469

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 107/410 (26%), Positives = 192/410 (46%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVI-----RINLDIVYICPVGI 77
           G +  +      V      V  + + ++ + +      +V+     +I  ++V    + +
Sbjct: 3   GKVIQVLGPVIDVEFDGNKVPEINEALIVEFEAEGEKKKVVLEVAAQIGDNVVRTIAMDL 62

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + ++ G+ V   G   ++       GR+ N  G  ID  + +        I    PP  
Sbjct: 63  TDGLTRGEKVVATGAPIKVPVGEAVLGRIFNVTGDVIDEGEPIPADVERWSIHRDPPPFE 122

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIIS 193
            +    + F+TGI+V+D+  P   G + G+F G+G+GK+ ++     +  +      + +
Sbjct: 123 EQSTKMEIFETGIKVVDLLCPYMKGGKTGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFA 182

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
            VGER RE  +   +     +  K  +     +E P  R    +T +T+AEYF   +  +
Sbjct: 183 GVGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGCRNRVAMTGLTMAEYFRDVENRD 242

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I RFA +  E++   G +P A GY  ++ +E+ RL ERI  +  +KG+IT++ 
Sbjct: 243 VLMFIDNIFRFAQAGAEMSALLGRIPSAVGYQPTLATEMGRLQERI--TSTKKGSITSIQ 300

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EK 370
           +V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D     +   
Sbjct: 301 AVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQIVGERHY 360

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           K+   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 361 KVARGVQEVLQKYKDLQDIIAILGMDELSEED-KLIVQRARKIEKFLSQP 409


>gi|76152312|gb|ABA39813.1| HrcN [Erwinia pyrifoliae]
          Length = 454

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 153/450 (34%), Positives = 240/450 (53%), Gaps = 20/450 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GK 54
           M    + L Q A    + L     V + G ++ I+ +   + C+     +GD    Q   
Sbjct: 3   MSALQQRLTQWAHQQQRRLERYSPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSD 60

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
               L +++  + + + +  +G  + IS G  +       RI  S    G V++  G+ +
Sbjct: 61  GGSVLSEIVGFSPEKILLSALGALDGISQGATIVPLYLPHRICVSEQLLGSVLDGFGRAL 120

Query: 114 DGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +          G    ++ +++  PP   R R+     TG+R ID    + +GQR+G+FA
Sbjct: 121 EPGGHSAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFA 180

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +   + L ++V++ ATSD  
Sbjct: 181 GAGCGKTTLLAELARTPRCDAIVFGLIGERGRELREFLDHELDEELLSRTVLLCATSDRI 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS TRFA + REI    GE P   G P SV+
Sbjct: 241 SMERARAAFTATAIAEAFRAEGKSVLLIVDSFTRFARAQREIGLALGEPPGRGGLPPSVY 300

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  + ++G ITA+ +VL++ D+ NDP+AD VRS++DGHIVL+R LAE   
Sbjct: 301 TLLPRLVERAG--QTQQGAITALYTVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNH 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR                L  L+  +++   +  +G Y+PG D + D AV
Sbjct: 359 YPAIDVLASLSRTMSNVVEPHHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAV 418

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
               II  FL+QS   + + D F++    L
Sbjct: 419 KPNDIINRFLRQS---MRAPDPFEQTQYHL 445


>gi|18146851|dbj|BAB82484.1| F0F1-ATPase subunit beta [Colwellia maris]
          Length = 461

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 17/411 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  I      V      V  + D V       D  G V+     +   +V    +
Sbjct: 1   MSTGKVVQIIGAVVDVEFPQDAVPQVYDAVKI--TEGDLEGLVLEVQQQLGGGVVRTIAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G+  ++       GR++N LG+PID    +G+ D    I  + P 
Sbjct: 59  GSSDGLRRGLNVENTGQGIQVPVGVETLGRIMNVLGEPIDEAGPIGEKD-RWSIHREAPA 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     +
Sbjct: 118 YAEQSMSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R     T +T+AE F  +G 
Sbjct: 178 FAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGR 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +   KG+IT++
Sbjct: 238 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGILQERI--TSTNKGSITSI 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  D      + 
Sbjct: 296 QAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSSSRQLDPLVVGAEH 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +    +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 356 YETARGVQTVLQRYKELKDIIAILGMDELSEDD-KQTVFRARKIQRFLSQP 405


>gi|12516045|gb|AAG56956.1|AE005416_10 flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 496

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 56  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 113

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 114 QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 172

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 173 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 231

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 232 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 291

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 292 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 351

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 352 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 411

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 412 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 471

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 472 QQGIFERADWEASLQGLERIF 492


>gi|315654810|ref|ZP_07907715.1| ATP synthase F1 sector alpha subunit [Mobiluncus curtisii ATCC
           51333]
 gi|315657267|ref|ZP_07910149.1| ATP synthase F1 sector alpha subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315490771|gb|EFU80391.1| ATP synthase F1 sector alpha subunit [Mobiluncus curtisii ATCC
           51333]
 gi|315491739|gb|EFU81348.1| ATP synthase F1 sector alpha subunit [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 542

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/450 (21%), Positives = 175/450 (38%), Gaps = 23/450 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  L+      E  S     + GY++        +  L       + +  Q      LG
Sbjct: 13  IKNALDKFVDAYEP-SAATAEEIGYVTETADGIAHIEGL-PGTMANELLRFQDG---TLG 67

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G    I  G  V+  G    +     + GRV++ LG PIDG   +
Sbjct: 68  LAMNLDEREIGAIVLGDFTGIEEGQEVYRTGDVLSVPVGDGYLGRVVDPLGNPIDGLGEI 127

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                   +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK     
Sbjct: 128 KDLGERRALELQAPGVMMRRSVFEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAIAI 187

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
            T+L+        D     + I   VG++G  +               + +V + + ++ 
Sbjct: 188 DTILNQRDNWKSGDPNKQVRCIYVAVGQKGSTIASVKGALEDAGAMEYTTIVASPASDAA 247

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF 
Sbjct: 248 GFKYLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFY 307

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    
Sbjct: 308 LHSRLLERCAKLSDELGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNAN 367

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           + P VD   SVSR+   A     KK+  +L   + ++   R +         +D    K 
Sbjct: 368 QRPAVDVGISVSRVGGDAQIKAMKKVAGTLKLTLAQY---RSMAAFAMLASDLDATTRKQ 424

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEITK 435
           + +   + + LKQ   +    E+    I  
Sbjct: 425 LTRGERLMELLKQPQYTPYPVEEQVCSIWA 454


>gi|228017237|gb|ACP52056.1| ATP synthase CF1 alpha subunit [Pinus flexilis]
          Length = 507

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 98/424 (23%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGLALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +P          +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPXXXXXXXXXSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|34098419|sp|Q52371|HRCN_PSESY RecName: Full=Type III secretion ATP synthase HrcN
          Length = 449

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 229/426 (53%), Gaps = 15/426 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +S++  +     C      +GD   V +   S  L +++    +   +  +G  
Sbjct: 22  VRVIGRVSAVRRILL--ECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPP 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--DGDDSLGKGDLSM---EIMSKV 132
           + I +G  +   G   RI       G V++  G+P+  D   +    +       +++  
Sbjct: 80  DGIQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGPEDRRTTLPVIADA 139

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
            P   R R+ +   TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++ 
Sbjct: 140 LPPTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVF 199

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGRE+REF+  +      ++SV+V ATSD S + R  A  TA  IAE F ++G  
Sbjct: 200 GLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQK 259

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G SE   G+ITA+ 
Sbjct: 260 VLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALY 317

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+         ++
Sbjct: 318 TVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRKHQR 377

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
             + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      Q
Sbjct: 378 ANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQ 434

Query: 432 EITKKL 437
           E   +L
Sbjct: 435 ETLDRL 440


>gi|332291870|ref|YP_004430479.1| ATP synthase F1, alpha subunit [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169956|gb|AEE19211.1| ATP synthase F1, alpha subunit [Krokinobacter diaphorus 4H-3-7-5]
          Length = 525

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 104/450 (23%), Positives = 168/450 (37%), Gaps = 37/450 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   +   + + G + ++      +  L+     G+ V  +   S     V+ +  D
Sbjct: 15  KQLSGFEATASLDEVGTVLTVGDGIARIYGLA-NAQYGELVEFE---SGLEAIVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G    I  GD V    R   I       GRV+N LG PIDG   +      M 
Sbjct: 71  NVGVVLLGTSLSIKEGDTVKRTQRIASIQVGEGITGRVVNTLGLPIDGKGPIAGQTYEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TGI+ ID   P+  GQR  V      GKST+      +   
Sbjct: 131 LERKAPGVVFREPVTEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKSTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V               + +V A + +   ++  AP    
Sbjct: 191 FYDAGEPVHCIYVAIGQKASTVALIANVLEEAGAMAYTTIVAANASDPAAMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFFLHSRLLERAAK 310

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 311 VINDDAIAKTMNDLPDSLKPIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLD 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L      F E         +   +
Sbjct: 371 GDLFNSGVRPAINVGISVSRVGGNAQIKSMKKVSGTLKLDQAAFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPS-DLSSED 428
           D      + +     + LKQ+ +   + ED
Sbjct: 428 DAATLNVIEKGKRNVEILKQAENTPFTVED 457


>gi|296105474|ref|YP_003615620.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059933|gb|ADF64671.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 460

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|194292003|ref|YP_002007910.1| sctn: non flagellar t3S system conserved protein. atpase alpha/beta
           chains family [Cupriavidus taiwanensis LMG 19424]
 gi|193225907|emb|CAQ71854.1| SctN: non flagellar T3S system conserved protein. ATPase alpha/beta
           chains family [Cupriavidus taiwanensis LMG 19424]
          Length = 460

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/440 (38%), Positives = 241/440 (54%), Gaps = 13/440 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NL 59
           +Q     L +  E ++   V   G +S    +    T +  +V  G+            L
Sbjct: 14  LQHAAADLERAFEHFTP--VAMRGRVSKAVGMLINATGIQAHV--GELCQLVTPGEPPLL 69

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+        + P+G    +S    V       +    A   GRV++ALG+PIDG  +
Sbjct: 70  AEVVGFVQQTALLTPLGRTTGVSALTEVIPSAHGHQCPAGAALLGRVLDALGEPIDGKGA 129

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G   + + ++ P  + R+ + +   TG+R ID    L  GQR+G+FA  G+GKSTLL
Sbjct: 130 LD-GVARVPVDNEPPDPLTRRLIREPLATGVRAIDGLLTLGEGQRVGIFAPPGVGKSTLL 188

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +++LVGERGREVREFI  +   D + ++V+VV+TSD SP+ R     T
Sbjct: 189 GMLARGASSDVNVVALVGERGREVREFIEYNLGSDGMARTVLVVSTSDRSPMERVRCAYT 248

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE+F  +G  VLL++DS+TR A + REI   SGE P  R YP SVFS LP+LLER 
Sbjct: 249 ATAIAEHFRDQGRRVLLLVDSLTRLARAQREIGLASGEPPTRRSYPPSVFSMLPQLLERA 308

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G     +G+ITA  +VL +G++ +DPIA+ VRSILDGHIVL+R LA  G+YPPVD L SV
Sbjct: 309 G--TGVQGSITAAYTVLTEGEDDSDPIAEEVRSILDGHIVLSRKLASAGQYPPVDVLQSV 366

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  +    +  + L  L+ R++E   +  IG YRPG D + D AV  +P I  +L
Sbjct: 367 SRVMPQVVAGAHARDAARLRQLLARYQELELLLQIGEYRPGADPVADAAVAAMPDIRAYL 426

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q     +  D F     KL
Sbjct: 427 AQPA---ARLDTFAGAVDKL 443


>gi|77461947|ref|YP_351454.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens Pf0-1]
 gi|118573725|sp|Q3K441|ATPB_PSEPF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77385950|gb|ABA77463.1| ATP synthase beta chain [Pseudomonas fluorescens Pf0-1]
          Length = 458

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 192/407 (47%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYDALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG PID    +G+ +    I    P    +
Sbjct: 60  GLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RWGIHRAAPSFAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      D  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNDHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V++   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEAD-KQLVNRARKIQRFLSQP 402


>gi|315179673|gb|ADT86587.1| FliIL [Vibrio furnissii NCTC 11218]
          Length = 448

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 148/427 (34%), Positives = 236/427 (55%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  +    G +  +  +      +     L    + +    D +  QV+  + ++ Y+ P
Sbjct: 23  SVPVARVTGRLVKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVVGFDHNVAYLMP 80

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V    G   +  S+ W GRV+N LG+ +D    L  GD  + +  K  
Sbjct: 81  IRRLGGLFAGAKVVPLEGDSTVQLSSQWLGRVVNGLGEALDDGAPLRGGD-RVSLEPKPI 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  ++   D +++ 
Sbjct: 140 NPLKRRPVDTPLDVGVRTINGLLTVGKGQRIGLMAGSGVGKSVLMGMITQNTEADVIVVG 199

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFI  +      +K++++ A +DESP++R  A L    +AEYF  +G +V
Sbjct: 200 LIGERGREVREFIERNLTEQARRKAIIIAAPADESPLMRLRATLLCHRVAEYFRDQGKDV 259

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G S+   G+++A+ +
Sbjct: 260 LLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSDNPDGSLSAIYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR            +
Sbjct: 320 VLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDVNASISRCMSAVTPEAHVTV 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQ 431
            +    L   + + +++  +GGY+PG D  LD+AV   P +  FL+QS  +         
Sbjct: 380 ANQFRQLYANYLQVKELLPLGGYQPGQDAELDRAVAMYPHLKAFLQQSAKERVDYTASLT 439

Query: 432 EITKKLQ 438
           ++ +  Q
Sbjct: 440 QLAQLFQ 446


>gi|261341611|ref|ZP_05969469.1| hypothetical protein ENTCAN_08074 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315963|gb|EFC54901.1| ATP synthase F1, beta subunit [Enterobacter cancerogenus ATCC
           35316]
          Length = 460

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|119776778|ref|YP_929518.1| F0F1 ATP synthase subunit alpha [Shewanella amazonensis SB2B]
 gi|158513095|sp|A1SBU2|ATPA_SHEAM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119769278|gb|ABM01849.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B]
          Length = 513

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 102/443 (23%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +           G I +++     V  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISDLIKQRIEQFDVVSEARNEGTIVAVSDGIIRVHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++R+ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-NDGFAPVEVIAPGVIDRKSVSQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   VG++   +   +           +VVVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTVVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|229819800|ref|YP_002881326.1| ATP synthase F1, alpha subunit [Beutenbergia cavernae DSM 12333]
 gi|259585423|sp|C5C1U6|ATPA_BEUC1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|229565713|gb|ACQ79564.1| ATP synthase F1, alpha subunit [Beutenbergia cavernae DSM 12333]
          Length = 544

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 175/446 (39%), Gaps = 25/446 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L      Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  AALDSFVNSYEPSASAREEVGRVTLAADGIAEVEGL-PGAMANELLQFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + + 
Sbjct: 69  NLDVRHIGVVVLGEFTGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGDV-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMARKSVHEPLQTGIKAIDSMIPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           L+  A  D  D     + +   +G++G  +             + + +V A + +    +
Sbjct: 188 LNQKANWDSGDPSKQVRCVYVAIGQKGSTIASVRGALEDAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D      + +
Sbjct: 368 AVDVGISVSRVGGDAQVKGMKKVSGTLKLELAQYRSLE---AFAMFASDLDAASRAQLKR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEIT 434
              + + LKQ   S  + ED    I 
Sbjct: 425 GAALTELLKQPQYSPFAVEDQVAMIW 450


>gi|251789185|ref|YP_003003906.1| flagellum-specific ATP synthase [Dickeya zeae Ech1591]
 gi|247537806|gb|ACT06427.1| ATPase, FliI/YscN family [Dickeya zeae Ech1591]
          Length = 456

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 156/452 (34%), Positives = 239/452 (52%), Gaps = 22/452 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M   L       + + K +     + + G ++  T +    T L  ++ LG   + + + 
Sbjct: 1   MTVRLSRWLSSIDTFEKRITNTPAIRRYGRLTRATGLVLEATGL--HMPLGSTCLIERQT 58

Query: 56  SDNL----GQVIRINLDIVYICPVGIGEEISLGDLVF--------HWGRFRISPSACWCG 103
            + +     +V+  N   +++ P+   E I  G  V+          G+ ++       G
Sbjct: 59  GNQIDEVESEVVGFNGQKLFLMPLEEVEGIIPGARVYERVGLSGSSQGK-QLPLGPALLG 117

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV++   KP+DG  +  +      + +     + R  +E     G+R I+    +  GQR
Sbjct: 118 RVLDGSAKPLDGLPA-PETGYRASLATAPFNPLQRTPIEHVLDVGVRAINALLTVGRGQR 176

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222
           +G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVV+ A
Sbjct: 177 MGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSVVIAA 236

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GY
Sbjct: 237 PADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R L
Sbjct: 297 PPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQL 356

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR        +    V      +  ++  RD+  +G Y  G D +
Sbjct: 357 AESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAGSDPM 416

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           LD+A+   P +  FL+Q   + SS D   +  
Sbjct: 417 LDRAIQLYPHMQHFLQQGMFERSSFDEACQAL 448


>gi|225159355|ref|ZP_03725652.1| H(+)-transporting two-sector ATPase [Opitutaceae bacterium TAV2]
 gi|224802061|gb|EEG20336.1| H(+)-transporting two-sector ATPase [Opitutaceae bacterium TAV2]
          Length = 509

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 175/442 (39%), Gaps = 27/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   L+ + Q     S+  V +  G I ++      ++ LS  V   + V   G   +  
Sbjct: 1   MSTVLDQIEQQIAKLSQKAVRKNTGVIRTVADGVAKISGLSD-VMYNEMVSFPG---NVT 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G    +  GD V   G+   +       GRVI+ +G P+DG   
Sbjct: 57  GIALNLEQDEVGCIILGDVSHLKEGDEVSTTGKLLSVPVGKALLGRVIDTIGNPLDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + ++ +    P  + R+ V +   TGI  ID   P+  GQR  +    G GK+T+ 
Sbjct: 117 IATTETAL-VEKIAPGIIERKSVSQPLFTGIMAIDSMIPIGRGQRELIIGDRGTGKTTIA 175

Query: 179 SMFARSDCF---------------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                +                     I   VG++   +   I         + +V+V A
Sbjct: 176 IDTIINQAKINKIGLASGAKDFRPVYSIYVAVGQKNSNIVRTIGALEAAGALEYTVIVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + ++P  + +AP     I E+F   G + L++ D +++ A + R+I+           Y
Sbjct: 236 AAADNPANQYLAPYAGAAIGEWFMENGMDALIVYDDLSKHAVAYRQISLILKRPSGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  VF    RLLER    E  KG++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 296 PGDVFYLHSRLLERAARLEG-KGSLTALPIIETLAGDVSAYIPTNVISITDGQIFLETDL 354

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P V    SVSR+   A     K++   L   + +F E   +     +   +D  
Sbjct: 355 FNQGIRPAVSVGLSVSRVGSAAQIKATKQVGGKLKGELAQFRE---LAAFAQFGSDLDAK 411

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               + +   I +  KQ   + 
Sbjct: 412 TKAQLDRGSRIVELFKQPAFNP 433


>gi|332308601|ref|YP_004436452.1| ATP synthase F1, alpha subunit [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175930|gb|AEE25184.1| ATP synthase F1, alpha subunit [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 513

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 104/448 (23%), Positives = 183/448 (40%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L +   +   V       G I  +T     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEIAELIKQRIEQFEVVSEARNEGTIVGVTDGIIRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLQEGAKVTSSGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++        +    P  + RQ V++  +TG + +D   P+  GQR  V      GK
Sbjct: 117 GKGAIDADGFE-PVEKIAPGVIERQSVDQPIQTGYKSVDAMIPVGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + L   ++  + D   K +   VG++   +   +           ++VV A++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGVKCVYVAVGQKASTIANVVRKLEEHGAMAHTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNENYVENFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D      +     + + +KQ+     S
Sbjct: 413 LDEATRAQLEHGERVMELMKQNQYAPLS 440


>gi|313885485|ref|ZP_07819235.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619215|gb|EFR30654.1| ATP synthase F1, alpha subunit [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 506

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 112/437 (25%), Positives = 188/437 (43%), Gaps = 19/437 (4%)

Query: 3   KNLETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           +  E + Q  +D  + +      ++ G + S+      V  L + V  G+ V  +    D
Sbjct: 2   EKTEQIIQRLKDRIQQVDWEFNDLETGTVFSVGDGIVFVRGL-RDVLSGELVRFE---DD 57

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGD 116
            LG  + +  + V I  +G    I   D V+      + +      GRV++ALG PID  
Sbjct: 58  TLGMALNLEENQVGIIVLGDDTNIKEDDSVYRTNHIVQTNVGDNLAGRVVDALGMPIDEA 117

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             L   D       + P  M R+ V++   TGI++ID   P+  GQR  +      GK+ 
Sbjct: 118 GELVVADQ-YPAERRAPTVMMRRSVDQPLFTGIKIIDSMIPIGKGQRELIIGDRQTGKTA 176

Query: 177 LLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
           +      +      K +   +G++   V + +E    +     +VVV + +D+S  ++ M
Sbjct: 177 IGINTIINQKGQNVKCVYVAIGQKASTVAQVVETLRQNGAMDYTVVVNSPADDSAAMQYM 236

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP T   IAEY+  +G++VL+I D +++ A + R I+           YP  VF    RL
Sbjct: 237 APYTGCAIAEYWMDQGEDVLVIYDDLSKHAVAYRTISLLLKRPSGREAYPGDVFYLHSRL 296

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     +    G+ITA+  +     + +  I  +V SI DG + L+ +    GR P V
Sbjct: 297 LERAAQLNERYGDGSITALPIIETQLGDISSYITTNVISITDGQLFLDSNAFNSGRRPAV 356

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D   SVSR+   A +   K + +SL   +  + E         Y   VD    + +    
Sbjct: 357 DSGLSVSRVGSSAQTQAMKHVSASLKLELATYYEL---LSFAQYSSDVDEETQRIIDHGA 413

Query: 412 IIYDFLKQSPSDLSSED 428
            + + LKQ  +   S D
Sbjct: 414 RLTELLKQGATTYLSHD 430


>gi|295095359|emb|CBK84449.1| ATP synthase F1 subcomplex beta subunit [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 460

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|130076690|gb|ABO31965.1| ATPase alpha subunit [Haloragis erecta]
          Length = 377

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 158/381 (41%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             S    + ++ E       G
Sbjct: 356 CGSSKLELAQYREVAAFAQFG 376


>gi|6561665|gb|AAF17009.1|AF197677_1 ATPase alpha subunit [Cinnamodendron ekmanii]
          Length = 405

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/394 (22%), Positives = 160/394 (40%), Gaps = 22/394 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 7   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 63

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 64  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 122

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 123 LIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 182

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 183 ALEYSILVAATASDPAPLQYLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 243 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 303 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
               +   +D +     ++   + +  KQ   + 
Sbjct: 360 AFAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 393


>gi|22651730|gb|AAM26937.1| ATP synthase beta subunit [Drosera regia]
          Length = 494

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      +      +       VV   K  D LGQ I +  ++        V   
Sbjct: 19  GRIIQIIGPVLDIAFPPGKMPYIYNALVV---KGRDTLGQPINVTCEVQQLLGNNRVRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +   +   GR+ N LG+PID    +     +  I    
Sbjct: 76  AMSATDGLTRGMDVVDTGTALSVPVGSATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P  +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        
Sbjct: 135 PAFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVFAGVGERTREGNDLYKEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 313 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 372

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 373 LQPKIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|291460685|ref|ZP_06600075.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416644|gb|EFE90363.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 474

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 111/419 (26%), Positives = 194/419 (46%), Gaps = 16/419 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      +     Q   L + +         + +V  +I  D+V    +   + +
Sbjct: 17  GKVIQIMGAVLDIRFEEGQLPSLLNAIEISHDGGKLIAEVAQQIGDDVVRCIAMSSTDGL 76

Query: 82  SLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G       G   +       GR+ N LG+P+D   +  K +    I    P   ++  
Sbjct: 77  VRGMEARDCGGPITVPVGDACLGRIFNLLGEPVDEKPA-PKTEERWAIHRPAPSFEDQTP 135

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       IS+   VGE
Sbjct: 136 ATEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGISVFTGVGE 195

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R    L+ +T+AEYF   +  +VLL 
Sbjct: 196 RTREGNDLYGEMKESGVLDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDERNQDVLLF 255

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V +V V
Sbjct: 256 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAVYV 313

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+   +    +  ++  
Sbjct: 314 PADDLTDPAPATTFTHLDATTVLSRDIASKGIYPAVDPLDSTSRILTPEVVGQEHYEIAR 373

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           ++  ++ R++E +DI  I G     +      V++   I +FL QS    S  + F  +
Sbjct: 374 AVQQVLQRYKELQDIIAIMGMDELSEED-KITVYRARKIQNFLSQS---FSVAEQFTGL 428


>gi|218135369|ref|ZP_03464173.1| hypothetical protein BACPEC_03274 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990754|gb|EEC56765.1| hypothetical protein BACPEC_03274 [Bacteroides pectinophilus ATCC
           43243]
          Length = 464

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 117/411 (28%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVG 76
             G I+ I      +         +   +    KN + L  V+ ++     D V    +G
Sbjct: 5   SMGKITQIIGAVIDIRFTDGNLPPINSAINITRKNGEKL--VVEVSQQLGDDTVRCIAMG 62

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      GR   +       GR+ N LG+PID      + D  + I  + P  
Sbjct: 63  PTDGLVRGMEAESTGRPITVPVGENTLGRMFNVLGEPIDNKPE-PQTDTYLPIHRQAPSF 121

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+ 
Sbjct: 122 EEQSTQAEVLETGIKVIDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVF 181

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     +  K+ +V    +E P  R    LT +T+AEYF  +G  
Sbjct: 182 TGVGERTREGNDLYGEMKESGVLSKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGK 241

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V
Sbjct: 242 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSV 299

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D      + 
Sbjct: 300 QAVYVPADDLTDPAPATTFAHLDATTVLSRSIVELGIYPAVDPLESTSRMLDPKVVGEEH 359

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            K+   +  ++ +++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 YKVARQVQEILQKYKELQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 409


>gi|38639342|gb|AAR25808.1| BcscN [Burkholderia multivorans E243]
          Length = 459

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 161/421 (38%), Positives = 224/421 (53%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 39  VSVQGRVNHAVGQILNATGI--RAKLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 96

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 97  AGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLDDRGPV-TGATWVSTQQDPPNPLA 155

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+GVFA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 156 RRMIDTPFPTGVRVIDGLMTLGVGQRVGVFAPSGVGKSTLLGMIARGAQADVNVIALVGE 215

Query: 198 RGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE     +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 216 RGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 275

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G      G+ITA+ +VLV+
Sbjct: 276 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAGQGAT--GSITALYTVLVE 333

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 334 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQAAARV 393

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 394 RELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAFCAQAQHEDVRFDALLAKLTK 453

Query: 437 L 437
           L
Sbjct: 454 L 454


>gi|6688492|emb|CAB65140.1| ATP synthase beta subunit [Justicia americana]
          Length = 498

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V QG   D +G+ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDTVGEAINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|186886219|gb|ACC93512.1| ATPase F1 alpha subunit [Luzula luzuloides]
          Length = 367

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 176

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 177 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 236

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 237 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 296

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 297 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 353

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 354 FAQFGSDLDAATQ 366


>gi|223931068|ref|YP_002586929.1| ATP synthase CF1 beta subunit [Syntrichia ruralis]
 gi|219562282|gb|ACL27613.1| ATP synthase CF1 beta subunit [Syntrichia ruralis]
          Length = 492

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 117/443 (26%), Positives = 194/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNL 59
           M+ N   L +++    KNL    G I+ I      VT    +   + + ++ +G+N+   
Sbjct: 1   MKTNFRIL-EISTLAIKNL----GRITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I +  ++        V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 54  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 293 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLTVARARKIERFLSQP 432


>gi|317185329|gb|ADV15991.1| ATP synthase F1 subunit alpha [Plantago macrorhiza]
          Length = 383

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/390 (22%), Positives = 155/390 (39%), Gaps = 23/390 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V          G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIQEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG   LG  +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGRAMLGRVVDGLGLPIDGKGPLGAHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKILNERATSEKETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L+ +AP +   + E+F     + L+I 
Sbjct: 176 KRSTVAQLVQILAEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEFFRDNAMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER          G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           SL   + ++ E   +     +   +D    
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAATQ 382


>gi|262371349|ref|ZP_06064667.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
 gi|262313686|gb|EEY94735.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
          Length = 519

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 180/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V +  +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LYGMALNLEQDSVGVVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   +  
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMLY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSADYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|148927459|ref|ZP_01810962.1| ATP synthase F1, alpha subunit [candidate division TM7 genomosp.
           GTL1]
 gi|147887183|gb|EDK72650.1| ATP synthase F1, alpha subunit [candidate division TM7 genomosp.
           GTL1]
          Length = 508

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 174/435 (40%), Gaps = 18/435 (4%)

Query: 5   LETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           L+ L Q   D  +NL         G ++ +      +  L +     + +  +  +    
Sbjct: 6   LKELTQELRDAIENLSASEGFESVGIVTRVGDGVAWIYGL-RSAGQSEVLSIETTDGSVG 64

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
             V+ +  D +    +G    +S G  V   G+   +       GRV++ LG+P+DG   
Sbjct: 65  AFVLNLMEDEIGAVLLGSDIGVSAGAKVRLTGKVLEVPVGPELLGRVVDPLGRPLDGKGP 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-- 176
           + K   +  + +  P  M R+ V +   TGI  ID   P+  GQR  +      GK+   
Sbjct: 125 I-KAKATGFVEAAAPGVMARKSVHEPLMTGIMGIDAIVPIGRGQRELIIGDRQTGKTAIA 183

Query: 177 --LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKM 233
              +   AR       I   +G++  +V   +E    + + + ++VV  +  +   L  +
Sbjct: 184 VDTMINQARQKTGVINIYVAIGQKLSKVSRMVERLHEEGVMEHTIVVATSPADPASLLYL 243

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + EYF     + L+I D +T+ A + R+++      P    +P  VF    RL
Sbjct: 244 APYAGTAMGEYFRDNKGHALMIYDDLTKHAVAYRQMSLLLRRPPGREAFPGDVFFLHSRL 303

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  +     + +  I  +V SI DG I L   L  +G  P V
Sbjct: 304 LERSAKLNDELGGGSLTALPIIETQAGDISAYIPTNVISITDGQIFLETDLFYQGIRPAV 363

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
               SVSR+   A +   K +  +L   + +F E   +     +   +D      + +  
Sbjct: 364 SMGLSVSRVGGNAQTKAVKSVSGNLKLSLAQFRE---LASFAQFDSDLDEATKNQIERGQ 420

Query: 412 IIYDFLKQSPSDLSS 426
            + + LKQ      S
Sbjct: 421 RLTELLKQPQYQPMS 435


>gi|71082935|ref|YP_265654.1| F0F1 ATP synthase subunit beta [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762641|ref|ZP_01264606.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|118573715|sp|Q4FP38|ATPB_PELUB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71062048|gb|AAZ21051.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91718443|gb|EAS85093.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 472

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 178/411 (43%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCL-GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ I      V    +   +        G N   L     +    V    +   E + 
Sbjct: 4   GKITQIIGAVVDVKFDGELPEILSALECKNGDNRLVLEVAQHLGESSVRTIAMDATEGLK 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            GD V   G   ++       GR+IN +G+PID    + K      I    P   ++   
Sbjct: 64  RGDEVTATGAPIQVPVGPETLGRIINVIGEPIDEKGEV-KTKEKWPIHRAAPEFSDQSTE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 182

Query: 199 GREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   +              K+ +V    +E P  R    LT +T+AEYF  +   
Sbjct: 183 TREGNDLYHEMIDSGVIKPEGPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 242

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 243 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITSV 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     D  
Sbjct: 301 QAIYVPADDLTDPAPATSFAHLDATTVLSRQIAEIGIYPAVDPLDSTSRILDPRIVGDEH 360

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 361 YRVAREVQKILQTYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 410


>gi|186886337|gb|ACC93571.1| ATPase F1 alpha subunit [Patosia clandestina]
          Length = 369

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGAPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 355 FAQFGSDLDXATQ 367


>gi|22651724|gb|AAM26934.1| ATP synthase beta subunit [Aldrovanda vesiculosa]
          Length = 492

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 18  GRIIQIIGPVLDVAFSPGKMPYIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +   +   GR+ N LG+PID    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVVDTGAALSVPVGSTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 135 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFAGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPNIVGDEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|54113605|gb|AAV29436.1| NT02FT1772 [synthetic construct]
          Length = 458

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 182/408 (44%), Gaps = 18/408 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
            G I  +      V             V+   N    G V+     I   +V    +G  
Sbjct: 3   TGKIIQVIGAVIDVEFARDNTP----KVYDALNVVEAGLVLEVQQQIGDGVVRTIAMGSS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG+PID    +   +    I    P    
Sbjct: 59  DGLRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTE-KRSIHQAPPAYDE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+V+D+  P   G ++G+F G+G+GK+  +     +   +     + + 
Sbjct: 118 LALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    L+ +TIAE F  +  +VL
Sbjct: 178 VGERTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           + +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 238 MFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  S LD  IVL+R +AE G YP VDPL S SR  D      D  + 
Sbjct: 296 YVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYET 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++  ++ R++E +DI  I G     D    K V +   I  FL Q 
Sbjct: 356 ARAVQKVLQRYKELKDIIAILGMDELSDED-KKIVDRARKIQRFLSQP 402


>gi|126730140|ref|ZP_01745952.1| H+-transporting two-sector ATPase, flagellum-specific [Sagittula
           stellata E-37]
 gi|126709520|gb|EBA08574.1| H+-transporting two-sector ATPase, flagellum-specific [Sagittula
           stellata E-37]
          Length = 458

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 177/439 (40%), Positives = 252/439 (57%), Gaps = 5/439 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M + +  L           V   G ++++      V+ LS+   +GD +          G
Sbjct: 1   MDEEISGLRARIAQMQP--VRDVGRVTAVDGTTIWVSGLSEVASIGDRLRLYHGAHTLGG 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
           +V+RI  D+V + P  + E +S GD V   G   ++P   W GRVI+A G+P+DG   LG
Sbjct: 59  EVLRIRNDLVAMLPDEVAEGVSKGDRVAVLGPPTLAPCDSWIGRVIDAYGQPLDGA-PLG 117

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G       +  PPA  R+R+     TG+ V D   P+  GQRIG+FAGSG+GKS LL+ 
Sbjct: 118 PGLKRRPFRASPPPAAARRRLGPRLSTGLSVFDTLLPIAQGQRIGLFAGSGVGKSRLLAQ 177

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            A+    D V+++LVGERGREV +F+   LG + +K+S+VV ATSD SP+ R+  PL A+
Sbjct: 178 LAQGMQADVVVLALVGERGREVLDFVTKVLGPEGMKRSIVVAATSDRSPLERRRCPLAAM 237

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAE+F  +G +VL + DSITRFA + RE+A  SGELP  RG+P SV  ++ RL ER G 
Sbjct: 238 TIAEHFRDQGKHVLYMADSITRFAEAHREVAIASGELPALRGHPPSVAHQIMRLAERAGC 297

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITAV+SVLV G +  +PIAD +R +LDGH+VL+R +AE GR+P +D L SVSR
Sbjct: 298 GVDGSGDITAVLSVLVAGSDMEEPIADILRGVLDGHVVLDRQIAERGRFPAIDLLRSVSR 357

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +A +  E  L+  +  L+  +  +  +   G YR G D ILD+AV     + DFL  
Sbjct: 358 SLPEAATEPENVLIGDVRQLLGSYARSETMIRAGLYREGEDPILDQAVRAWADLDDFLA- 416

Query: 420 SPSDLSSEDVFQEITKKLQ 438
             S    +  FQ +   L+
Sbjct: 417 EASPAGPQRAFQRLELILR 435


>gi|34539381|gb|AAQ74574.1| F1-ATPase alpha subunit [Neoastelia spectabilis]
          Length = 418

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIXVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV+BALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  XRTGSIVDVPAGKAMLGRVVBALGVPIDGRGALSBHE-RRRVXVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  G R  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGXRELIIGDRQTGKTAIAIDXILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|226944509|ref|YP_002799582.1| flagellum-specific ATPase [Azotobacter vinelandii DJ]
 gi|226719436|gb|ACO78607.1| Flagellum-specific ATPase [Azotobacter vinelandii DJ]
          Length = 459

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 159/452 (35%), Positives = 240/452 (53%), Gaps = 29/452 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ------GK 54
           +Q+ L+ L             + G I   T +      L   + LG     +      G+
Sbjct: 17  LQRRLDEL---------PPYRRSGRIVRATGMVLEAVGLD--IPLGGVCRIELAAQPGGE 65

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-------RISPSACWCGRVIN 107
                 +V+    + +++ P+     +  G  VF  G         R        GRV++
Sbjct: 66  ARQAEAEVVGFAGERLFLMPLEEIAGLRPGARVFPLGEGGDALGARRFPLGERLLGRVVD 125

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
           + G+P+DG   L  G     + +     ++R  +++    GIR I+    +  GQR+G+F
Sbjct: 126 SSGQPLDGLGPLD-GVHHASLHTPPLNPLHRAPIDRQIDVGIRAINGLLSVGRGQRMGLF 184

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV++FI++ LG + L++SVVV A +D 
Sbjct: 185 AGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVQDFIDNILGAEGLRRSVVVAAPADN 244

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+ R      A  +AE F   G +VLLI+DS+TR+A + REIA   GE P  +GYP SV
Sbjct: 245 SPLQRLQGAAYATRLAEDFRDAGRDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSV 304

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
           F++LPRL+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G
Sbjct: 305 FAKLPRLVERTGNGPRGGGSITAFYTVLSEGDDQQDPIADSARAILDGHIVLSRALAESG 364

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
            YP +D  AS+SR         +++        + R++  RD+  +G Y PG D  LD+A
Sbjct: 365 HYPAIDIEASISRAMTAIVDDAQQRKAQQFKQSLSRYQRNRDLISVGAYAPGHDPQLDRA 424

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           V+  P +  FL+Q   + +     +E  K L 
Sbjct: 425 VNLYPQLERFLQQRIDERAG---IEETLKALN 453


>gi|298346226|ref|YP_003718913.1| F0F1 ATP synthase subunit alpha [Mobiluncus curtisii ATCC 43063]
 gi|304390011|ref|ZP_07371965.1| ATP synthase F1 sector alpha subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|298236287|gb|ADI67419.1| F0F1 ATP synthase subunit alpha [Mobiluncus curtisii ATCC 43063]
 gi|304326493|gb|EFL93737.1| ATP synthase F1 sector alpha subunit [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 542

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/450 (21%), Positives = 175/450 (38%), Gaps = 23/450 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  L+      E  S     + GY++        +  L       + +  Q      LG
Sbjct: 13  IKNALDKFVDAYEP-SAATAEEIGYVTETADGIAHIEGL-PGTMANELLRFQDG---TLG 67

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G    I  G  V+  G    +     + GRV++ LG PIDG   +
Sbjct: 68  LAMNLDEREIGAIVLGDFTGIEEGQEVYRTGDVLSVPVGDGYLGRVVDPLGNPIDGLGEI 127

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
                   +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK     
Sbjct: 128 KDLGERRALELQAPGVMMRRSVFEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAIAI 187

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
            T+L+        D     + I   VG++G  +               + +V + + ++ 
Sbjct: 188 DTILNQRDNWKSGDPNKQVRCIYVAVGQKGSTIASVKGALEDAGAMEYTTIVASPASDAA 247

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF 
Sbjct: 248 GFKYLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFY 307

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    
Sbjct: 308 LHSRLLERCAKLSDELGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNAN 367

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           + P VD   SVSR+   A     KK+  +L   + ++   R +         +D    K 
Sbjct: 368 QRPAVDVGISVSRVGGDAQIKAMKKVAGTLKLTLAQY---RSMAAFAMLASDLDATTRKQ 424

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEITK 435
           + +   + + LKQ   +    E+    I  
Sbjct: 425 LTRGERLMELLKQPQYTPYPVEEQVCSIWA 454


>gi|240275579|gb|EER39093.1| ATP synthase subunit alpha [Ajellomyces capsulatus H143]
          Length = 522

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 93/405 (22%), Positives = 167/405 (41%), Gaps = 34/405 (8%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + S+      V  ++  V   + V      S   G  + +    V +   G    
Sbjct: 71  AETGRVLSVGDGIARVHGMT-NVQAEELVEFA---SGVKGMCMNLEAGQVGVVLFGSDRL 126

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GRVI+ALG PIDG   + K         K P  + R+
Sbjct: 127 VKEGETVKRTGEIVDVPVGPELLGRVIDALGNPIDGKGPI-KAKEKRRAQLKAPGILPRR 185

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            V +  +TG+ V  ++ P+  GQ+  ++                       +   VG++ 
Sbjct: 186 SVNQPVQTGLSVSTLWVPIGRGQQQKLY----------------------CVYVAVGQKR 223

Query: 200 REVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++    ++  K S+VV AT+ E+  L+ +AP T   + E+F   G + L+  D 
Sbjct: 224 STVAQLVKTLEENDAMKYSIVVAATASEAAPLQYIAPFTGCAVGEWFRDNGRHALITYDD 283

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    YP  VF    RLLER          G++TA+  +   
Sbjct: 284 LSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDNHKGGSLTALPIIETQ 343

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           G + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A     K++  SL
Sbjct: 344 GGDVSAYIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQLKAMKQVAGSL 403

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 404 KLFLAQYRE---VAAFAQFGSDLDASTKQTLNRGERLTELLKQKQ 445


>gi|311279117|ref|YP_003941348.1| ATPase, FliI/YscN family [Enterobacter cloacae SCF1]
 gi|308748312|gb|ADO48064.1| ATPase, FliI/YscN family [Enterobacter cloacae SCF1]
          Length = 456

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 159/429 (37%), Positives = 237/429 (55%), Gaps = 19/429 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + +    G   +   +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERLENGDVREVESEVVGFNGHRLFLMPL 82

Query: 76  GIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
              E +  G  V+           G+ ++       GRV++  GKP+DG  +    + + 
Sbjct: 83  EEVEGVLPGARVYARNACGEGLQSGK-QLPLGPALLGRVLDGGGKPLDGLPAPDTTE-TG 140

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR   
Sbjct: 141 ALITPPFNPLQRTAIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQ 200

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR      A  IAE F
Sbjct: 201 ADVIVVGLIGERGREVKDFIENILGADGRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 260

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 261 RDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGG 320

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      
Sbjct: 321 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALI 380

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + +
Sbjct: 381 TEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEAFLQQGIFEKA 440

Query: 426 S-EDVFQEI 433
             ED  Q +
Sbjct: 441 DWEDSLQAL 449


>gi|283794874|ref|YP_003359227.1| ATP synthase CF1 alpha subunit [Cryptomonas paramecium]
 gi|253981846|gb|ACT46763.1| ATP synthase CF1 alpha subunit [Cryptomonas paramecium]
          Length = 506

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 181/423 (42%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +   +Y + +     G +            L Q V +G+ V  + +    LG V+ 
Sbjct: 11  SLIREQINNYDQTVCTSHIGTVVQSADGMARAYGLDQ-VMMGELVEFEDR---TLGIVLN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           + ++ V I  +G    I  G  V   G+   I     + GR+I+ALG P+DG   +   D
Sbjct: 67  LEVNNVGIMILGNSRTIIEGTSVKATGKIAHIPVGKNYLGRIIDALGNPVDGKGDIYTED 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
            S+ I    P  ++R  + +   TGI  ID   P+  GQR  +      GK+   + ++ 
Sbjct: 127 TSL-IEPPAPGIISRAPITEPIHTGIITIDSMIPIGRGQRELIIGDRQTGKTSLAIDTIL 185

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   VR            + + ++ A+S+ES  L+ +AP T   
Sbjct: 186 NQKDEGVICIYIAIGQKASSVRSIAHILQEKGALEYTTILSASSEESAALQYIAPYTGTA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF  +G +VL+I D +++ A + R+++      P    YP  VF    +LLER    
Sbjct: 246 IGEYFMHQGQSVLIIYDDLSKHATAYRQLSLILRRPPGREAYPGDVFYAHSKLLERSAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  +     + +  I  +V SI DG I L+  L   G  P ++   SVS
Sbjct: 306 NPKLGGGSITAIPIIETQASDVSAYIPTNVISITDGQIFLSGDLFNSGVRPAINIGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSSAQTKAIKKISGKLKLELSQFYELE---TFSQFTSDLDRSTKNQLARGQRLREILK 422

Query: 419 QSP 421
           Q  
Sbjct: 423 QPQ 425


>gi|146309428|ref|YP_001189893.1| FliI/YscN family ATPase [Pseudomonas mendocina ymp]
 gi|145577629|gb|ABP87161.1| ATPase, FliI/YscN family [Pseudomonas mendocina ymp]
          Length = 438

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 153/404 (37%), Positives = 218/404 (53%), Gaps = 6/404 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L    G +  ++ +      L      G    V Q   S    QV+  N DI Y+ P   
Sbjct: 18  LAKVAGRLVRVSGMLL--ESLGCQRSTGQRCRVEQADGSLLDAQVVGFNRDITYLMPFKK 75

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              ++ G  VF       +     W GRV+N LG+P+D    L  G   + +       +
Sbjct: 76  PVGLAAGSRVFPAKDEALLQIDESWLGRVVNGLGEPLDERGKLS-GRDPLPVELPTVNPL 134

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ VE     G+R I+    L  GQR+G+FAGSG+GKS LL M  R    D V++ L+G
Sbjct: 135 KRRPVEAALDVGVRAINALLTLGKGQRVGLFAGSGVGKSVLLGMITRQTKADVVVVGLIG 194

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV+EF+      + L+K+VVVVA ++ESP++R  A     +IA YF  +G +VLL+
Sbjct: 195 ERGREVQEFLLHSLGEEGLRKAVVVVAPANESPLMRLKATELCHSIAAYFRDQGQDVLLL 254

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + REIA   GE P  +GYP SVF  LP L+E  G  E   G+++A+ +VL 
Sbjct: 255 VDSLTRYAMAQREIALALGEPPATKGYPPSVFGMLPELVESAGNGESGSGSLSAIYTVLA 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+H DPI D  R+ILDGHIVL+R LA+ G YP +D  ASVSR   +            
Sbjct: 315 EGDDHQDPIVDCARAILDGHIVLSRRLADVGHYPAIDISASVSRCMSQVGEPAHLGAARQ 374

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  +E+ +++  +GGY PG+D   D+AV   P +  FL+Q
Sbjct: 375 FKEFYSTYEKIKELIPLGGYTPGMDAKTDRAVQLAPSLERFLRQ 418


>gi|266624715|ref|ZP_06117650.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
 gi|288863414|gb|EFC95712.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
          Length = 463

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 186/409 (45%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVGIG 78
           G I+ I      +     +   + D +    KN + L  V+ ++     D V    +G  
Sbjct: 7   GKITQIIGAVLDIKFSQGRLPSINDAIDITMKNGNRL--VVEVSQHLGDDTVRCIAMGST 64

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    I       GR+ N LG PID      +    + I    P    
Sbjct: 65  DGLVRGMEAVATGAPITIPVGEETLGRIFNVLGDPIDNKPK-PEVKEYLPIHRPAPTFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   
Sbjct: 124 QSTETEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +   +V
Sbjct: 184 VGERTREGNDLYYEMQESGVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQAGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+R++ E G YP VDPL S SR+ D      +   
Sbjct: 302 VYVPADDLTDPAPANTFAHLDATTVLSRAIVELGIYPAVDPLESTSRILDPRIVGEEHYN 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  + G     +      V +   I  FL Q 
Sbjct: 362 VARGVQEVLQKYKELQDIIAMLGMDELSEED-KLTVSRARKIQRFLSQP 409


>gi|256420279|ref|YP_003120932.1| ATP synthase F1, alpha subunit [Chitinophaga pinensis DSM 2588]
 gi|256035187|gb|ACU58731.1| ATP synthase F1, alpha subunit [Chitinophaga pinensis DSM 2588]
          Length = 525

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 95/430 (22%), Positives = 161/430 (37%), Gaps = 36/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  +      +  L+  V  G+ V  +          + +  D V +  +G   EI
Sbjct: 28  EVGTVLQVGDGIARIYGLN-NVGYGELVEFENG---VKAIALNLEEDNVGVVLMGESGEI 83

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G+   I       GRV+N LG  IDG   +      M +  K P  + R+ 
Sbjct: 84  KEGFKVRRTGQIASIKVGEGMVGRVVNTLGAAIDGKGPITGELYEMPLERKAPGVLFREP 143

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVIIS 193
           V++  +TGI+ ID   P+  GQR  V      GK+ +      +             I  
Sbjct: 144 VKEPLQTGIKAIDAMIPVGRGQRELVIGDRQTGKTAICIDTIINQKEFFDAGKPVYCIYV 203

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VG++   +   ++          + +V A++ +   L+  AP     I E+F   G   
Sbjct: 204 AVGQKASTIAGVMKTLQEAGAMAYTTIVAASAADPAPLQFYAPFAGAAIGEFFRDTGRPA 263

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE----------- 301
           L++ D +++ A + RE++      P    YP  VF    RLLER                
Sbjct: 264 LIVYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAKVISKDDIAQQMND 323

Query: 302 ---------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
                    K  G++TA+  +     + +  I  +V SI DG I L  +L   G  P ++
Sbjct: 324 LPASIKHLVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESNLFNAGIRPAIN 383

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  +L     ++ E         +   +D      + +   
Sbjct: 384 VGISVSRVGGNAQIKSMKKVSGTLKLDQAQYREME---AFSKFGGDLDAATKAVLDKGAR 440

Query: 413 IYDFLKQSPS 422
             + LKQ+  
Sbjct: 441 NVEILKQAQF 450


>gi|313837672|gb|EFS75386.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL037PA2]
 gi|314972611|gb|EFT16708.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL037PA3]
 gi|328907532|gb|EGG27298.1| ATP synthase F1, alpha subunit [Propionibacterium sp. P08]
          Length = 545

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGSPVDGLGEIKGI 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPKKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQGQFSPYPVE 444


>gi|90409881|ref|ZP_01217898.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
 gi|90329234|gb|EAS45491.1| ATP synthase subunit A [Photobacterium profundum 3TCK]
          Length = 513

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 188/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L                 G I S++    ++  L+  V  G+ +   G  
Sbjct: 1   MQLNSNEISDLIRQRIATFNVTSQARNEGTIVSVSDGIISINGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   +++ G  V   GR   +       GRV+N LG+ ID
Sbjct: 58  -NRYALALNLERHSVGAVVMGPYSDLAEGLKVKGTGRILEVPVGRGLLGRVVNTLGQAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++ + D    +    P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAI-ENDGYSPVEIIAPGVIERQSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + +   ++  + D   K +   +G++   +   +      D LK ++VVVAT+ ++  L+
Sbjct: 176 TAMAIDAIINQKDSGIKCVYVAIGQKASTIANVVRKLEEHDALKNTIVVVATASDAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNVSYVERFTKGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E         +   
Sbjct: 356 QTHLFNSGLRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAQYREL---AAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDDATRKQLDHGEKVTELMKQKQ 435


>gi|88813204|ref|ZP_01128444.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrococcus mobilis Nb-231]
 gi|88789526|gb|EAR20653.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN
           [Nitrococcus mobilis Nb-231]
          Length = 457

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 151/437 (34%), Positives = 238/437 (54%), Gaps = 7/437 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVI 63
           LE L +  E   +  +V  G +  +  +            +G    V  G  +    +V+
Sbjct: 12  LERLRKYRERVRRPPLVVEGQLQRMVGLTLEAEG--CQAAVGSRCTVIAGAGAQVEVEVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
               D +Y+ P G    ++    V                GRV++  G+P+DG   L + 
Sbjct: 70  GFAGDKLYLMPTGSLHGLTPNARVIPHAEACEARVGTGLLGRVLDGAGRPLDGKK-LPRA 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D +M ++ +    + R  +++    GIR I+    +  GQR+G+FAGSG+GKS LL M  
Sbjct: 129 DATMPLVGRSINPLLRAPIQRPLDVGIRTINALLTVGRGQRMGLFAGSGVGKSVLLGMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V++ L+GERGREV+EFI+  LGD  L ++VV+ A +D SP++R    L   +I
Sbjct: 189 RYTTADIVVVGLIGERGREVKEFIDHILGDEGLSRAVVIAAPADTSPLMRLHGALLTSSI 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G  VLL++DS+TR+A + REI    GE P  +GYP SVF++LP+L+ER G   
Sbjct: 249 AEYFRDRGCQVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFAKLPQLVERAGNGP 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+ITA  +VL +GD+HNDP+AD+ R+ILDGH+VL+R LA+ G YP +D  AS SR  
Sbjct: 309 VDGGSITAFYTVLTEGDDHNDPVADAARAILDGHVVLSRELADAGHYPAIDIEASASRAM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +A++ K V    +L   + + +D+  +G Y+ G +  +D+A+   P +  +L+Q  
Sbjct: 369 LNIITAEQLKAVHRFKNLYSLYRQNQDLINVGAYKAGSNARVDEAMAYQPELVRYLRQDI 428

Query: 422 SDLSSE-DVFQEITKKL 437
            +     +   E+   L
Sbjct: 429 DEAVDFAESIAELLDLL 445


>gi|120597297|ref|YP_961871.1| FliI/YscN family ATPase [Shewanella sp. W3-18-1]
 gi|146294558|ref|YP_001184982.1| FliI/YscN family ATPase [Shewanella putrefaciens CN-32]
 gi|120557390|gb|ABM23317.1| ATPase, FliI/YscN family [Shewanella sp. W3-18-1]
 gi|145566248|gb|ABP77183.1| ATPase, FliI/YscN family [Shewanella putrefaciens CN-32]
          Length = 449

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 148/424 (34%), Positives = 241/424 (56%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G +  +  +      +   + +GD    +G++   +  +V+  + D++ + P+ 
Sbjct: 18  PVARVYGRLIRVNGLLL--EAVGCQLGMGDRCQIEGRHGRLIEAEVVGFHRDVLCLMPIE 75

Query: 77  IGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V        I+      GRV++ LG+P+D    L       +  +   P 
Sbjct: 76  PTQGLMPGARVLPITHEQTIAIGDGLLGRVLDGLGQPLDLFGDLTDVSQVQQSHTSYNPL 135

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQ + +    GIR I+   P+  GQR+G+FAGSG+GKS LL M  R    D V++ L+
Sbjct: 136 L-RQPIRQPLDVGIRAINSLLPIGRGQRLGLFAGSGVGKSVLLGMMTRFTDADVVVVGLI 194

Query: 196 GERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFIE+    +  K++V++ A +D +P++R  A   + +IA  F  +G  VLL
Sbjct: 195 GERGREVREFIEETLGEEGRKRAVIIAAPADTTPLMRLRAMRLSHSIACAFRDQGKQVLL 254

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA + GE P  +GYP S F++LPRL+E  G  E   G +TA  +VL
Sbjct: 255 LVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVL 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+  DP+AD+ R+ILDGHIVL+R LAE+G +P +D  ASVSRLA +  +A   +   
Sbjct: 315 VEGDDQQDPVADAARAILDGHIVLSRKLAEQGHFPAIDINASVSRLAMQIATASSIEQSQ 374

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ-SPSDLSSEDVFQEI 433
              H++ R+ E RD+  +GGY+ G D  +D AV   P +  FL+Q + + ++  +   ++
Sbjct: 375 IFRHILSRYNEVRDLLPLGGYQAGQDPEMDLAVRVYPEMAKFLRQTTQTKINLAESLVQL 434

Query: 434 TKKL 437
            + +
Sbjct: 435 EQLM 438


>gi|62085198|gb|AAX63003.1| ATP synthase beta subunit [Tetracoccus dioicus]
          Length = 482

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 186/421 (44%), Gaps = 28/421 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           +G  +  I  V   V    +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 5   RGRIVQIIGPVLDVVFPRGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRTV 62

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 63  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSA 121

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +      + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   +
Sbjct: 122 PAFIELDTKLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGV 181

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 182 SVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 241

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 242 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 300 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTM 359

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 360 LQPNIVGSDHYETARKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 418

Query: 420 S 420
            
Sbjct: 419 P 419


>gi|226287911|gb|EEH43424.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb18]
          Length = 513

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 189/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  LA  Y+     Q G I  +      V    + +   L       G     L     
Sbjct: 27  ALRSLASRYASTSSGQVGKIHQVIGAVVDVKFDGEQLPSILNALETTNGNQKLVLEVAQH 86

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V   G    I       GR++N  G PID    + K  
Sbjct: 87  LGENVVRTIAMDGTEGLVRGATVTDTGAPIMIPVGPGTLGRIMNVTGDPIDERGPI-KHS 145

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 146 KKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 205

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 206 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 265

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 266 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 325

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 326 QERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 383

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +  ++ + +  ++  ++  +DI  I G     +      V +   
Sbjct: 384 LDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 442

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I  KL
Sbjct: 443 LQRFLSQP---FTVAQVFTGIEGKL 464


>gi|61968281|gb|AAX57067.1| ATP synthase beta subunit [Petalodiscus fadenii]
          Length = 479

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTAPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   +GER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGIGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|117922561|ref|YP_871753.1| F0F1 ATP synthase subunit beta [Shewanella sp. ANA-3]
 gi|166222416|sp|A0L2S8|ATPB_SHESA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117614893|gb|ABK50347.1| ATP synthase F1, beta subunit [Shewanella sp. ANA-3]
          Length = 463

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ S N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKITGEGSCN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG PID   ++G+ +    I    P 
Sbjct: 60  GTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGDPIDEAGAIGEEE-RYVIHRSAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEEQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDED-KMTVSRARKIERFLSQP 406


>gi|323308508|gb|EGA61753.1| Atp2p [Saccharomyces cerevisiae FostersO]
          Length = 511

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|256832995|ref|YP_003161722.1| ATP synthase F1, alpha subunit [Jonesia denitrificans DSM 20603]
 gi|256686526|gb|ACV09419.1| ATP synthase F1, alpha subunit [Jonesia denitrificans DSM 20603]
          Length = 543

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 176/447 (39%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L    + Y    VV  + G +S        V  L       + +  +      LG  +
Sbjct: 13  AALDSFVKSYEPAQVVTEEVGRVSLAGDGIAQVEGL-PGAMANELLQFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  SLDVREIGVVILGEFTGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGTPIDGLGEVATV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 -GRRALELQAPGVMQRKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIAVDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  +  D     + I   VG++G  +             + + +V A + +    +
Sbjct: 188 INQKANWETGDPTKQVRCIYVAVGQKGSTIAAVRGALEDAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYEGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++           +   +D      + +
Sbjct: 368 AVDVGISVSRVGGSAQTKAMKKVSGTLKLELAQYRSLE---AFALFASDLDAASKAQLTR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   +   SED    I  
Sbjct: 425 GARLMELLKQGQYTPYPSEDQVVSIWA 451


>gi|24986088|gb|AAN69944.1|AE016633_2 flagellum-specific ATP synthase FliI [Pseudomonas putida KT2440]
          Length = 457

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 158/429 (36%), Positives = 232/429 (54%), Gaps = 15/429 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L T A+  E  ++ +V   G +  +  +      L     +G   +    +S      
Sbjct: 16  KRLGTYAEAIELPAQPIV--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPVQV 71

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+      V++ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 72  EAEVMGFAGPKVFLMPVGSIVGIAPGARVVPLDDGGRL--PMGMSMLGRVLDGAGRALDG 129

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 130 KGGM-KAEDWVPMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 188

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    + +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 189 VLLGMMTRFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 248

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+
Sbjct: 249 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLV 308

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G  E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  
Sbjct: 309 ERAGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIE 368

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+  +   AD  +       L  R  ++RD+  +G Y  G D   D A+     + 
Sbjct: 369 ASISRVMPQVVDADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLV 428

Query: 415 DFLKQSPSD 423
           +FL+Q   +
Sbjct: 429 EFLRQGLRE 437


>gi|6322581|ref|NP_012655.1| Atp2p [Saccharomyces cerevisiae S288c]
 gi|84028178|sp|P00830|ATPB_YEAST RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|307568101|pdb|2XOK|D Chain D, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568102|pdb|2XOK|E Chain E, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|307568103|pdb|2XOK|F Chain F, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A
           Resolution
 gi|1015845|emb|CAA89652.1| ATP2 [Saccharomyces cerevisiae]
 gi|1483632|gb|AAC49475.1| F1-ATPase beta-subunit [Saccharomyces cerevisiae]
 gi|256273131|gb|EEU08086.1| Atp2p [Saccharomyces cerevisiae JAY291]
 gi|285813008|tpg|DAA08906.1| TPA: Atp2p [Saccharomyces cerevisiae S288c]
          Length = 511

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|116692941|ref|YP_838474.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia HI2424]
 gi|116650941|gb|ABK11581.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia cenocepacia HI2424]
          Length = 458

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 223/421 (52%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 38  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 95

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 96  AGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLDDRGPV-TGAAWVSTQQDPPNPLA 154

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 155 RKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 214

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 215 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 274

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G  +   G+ITA+ +VLV+
Sbjct: 275 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAG--QGAHGSITALYTVLVE 332

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   +   + +
Sbjct: 333 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQHAAARV 392

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 393 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQASDEDVRFDALLAKLTK 452

Query: 437 L 437
           L
Sbjct: 453 L 453


>gi|323347832|gb|EGA82094.1| Atp2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 511

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|206563889|ref|YP_002234652.1| type III secretion ssytem protein [Burkholderia cenocepacia J2315]
 gi|18092674|gb|AAL59403.1| BcscN [Burkholderia cenocepacia]
 gi|28394255|gb|AAO31730.1| BcscN [Burkholderia cenocepacia]
 gi|198039929|emb|CAR55907.1| type III secretion ssytem protein [Burkholderia cenocepacia J2315]
          Length = 457

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 223/421 (52%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 37  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 94

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 95  AGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLDDRGPV-TGAAWVSTQQDPPNPLA 153

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 154 RKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 213

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 214 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 273

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G  +   G+ITA+ +VLV+
Sbjct: 274 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAG--QGAHGSITALYTVLVE 331

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   +   + +
Sbjct: 332 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQHAAARV 391

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 392 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQASDEDVRFDALLAKLTK 451

Query: 437 L 437
           L
Sbjct: 452 L 452


>gi|295101398|emb|CBK98943.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 464

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEI 81
           G +  +      +      +  L + +         + +V ++  D V     +   + +
Sbjct: 7   GKVIQVIGPVLDIQFKDGELPDLLNAIEIDNHGQKLVVEVAQLTGDNVARCIAMSSTDGL 66

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G   ++       GRV N LG+P+D   +    +    I    P    +Q 
Sbjct: 67  VRGTEAVDTGESIKVPVGDQCLGRVFNLLGEPVDNKPA-PTPEAYWPIHRPAPSYEEQQS 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 126 TTEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL 
Sbjct: 186 RTREGNDLYGEMTESGVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +    + V +   +  FL QS
Sbjct: 364 AVQKVLQRYKELQDIIAIMGMDELSEED-KRTVSRARKVQRFLSQS 408


>gi|262374655|ref|ZP_06067928.1| ATP synthase F1, alpha subunit [Acinetobacter junii SH205]
 gi|262310445|gb|EEY91536.1| ATP synthase F1, alpha subunit [Acinetobacter junii SH205]
          Length = 519

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDEPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSADYVEKFTNGAVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|56707243|ref|YP_169139.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669713|ref|YP_666270.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301278|ref|YP_001121246.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|254369928|ref|ZP_04985936.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254375017|ref|ZP_04990497.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|81820830|sp|Q5NIK3|ATPB_FRATT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123169682|sp|Q14K06|ATPB_FRAT1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201706|sp|A4IW24|ATPB_FRATW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56603735|emb|CAG44697.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320046|emb|CAL08080.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049055|gb|ABO46126.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568174|gb|EDN33828.1| hypothetical protein FTBG_01520 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151572735|gb|EDN38389.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|282158352|gb|ADA77743.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           tularensis NE061598]
 gi|332184761|gb|AEE27015.1| ATP synthase beta chain [Francisella cf. novicida 3523]
          Length = 458

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 183/410 (44%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  +      V             V+   N    G V+     I   +V    +G
Sbjct: 1   MSTGKIIQVIGAVIDVEFARDNTP----KVYDALNVVEAGLVLEVQQQIGDGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +      +       GR++N LG+PID    +   +    I    P  
Sbjct: 57  SSDGLRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTE-KRSIHQAPPAY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                  +  +TGI+V+D+  P   G ++G+F G+G+GK+  +     +   +     + 
Sbjct: 116 DELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    L+ +TIAE F  +  +
Sbjct: 176 AGVGERTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  S LD  IVL+R +AE G YP VDPL S SR  D      D  
Sbjct: 294 AVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   ++  ++ R++E +DI  I G     D    K V +   I  FL Q 
Sbjct: 354 ETARAVQKVLQRYKELKDIIAILGMDELSDED-KKIVDRARKIQRFLSQP 402


>gi|323336891|gb|EGA78149.1| Atp2p [Saccharomyces cerevisiae Vin13]
          Length = 511

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|156530207|gb|ABU75200.1| AtpB [Simarouba amara]
          Length = 465

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 27  KGRDTVGQPINMTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 86

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 87  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 145

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         I   VGER RE  +   +             
Sbjct: 146 GLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESGVINEQNIA 205

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 206 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 265

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 266 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 323

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 324 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 383

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 384 ILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|317185325|gb|ADV15989.1| ATP synthase F1 subunit alpha [Plantago coronopus]
          Length = 381

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 89/389 (22%), Positives = 155/389 (39%), Gaps = 23/389 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L + +  G+ V          G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGL-KEIQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIQEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ LG PIDG   LG  +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGRAMLGRVVDGLGLPIDGKGPLGAHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKILNERATSEKETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L+ +AP +   + E+F     + L+I 
Sbjct: 176 KRSTVAQLVQILAEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEFFRDNAMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER          G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           SL   + ++ E   +     +   +D   
Sbjct: 356 SLKLELAQYRE---VAAFAQFGSDLDAAT 381


>gi|151945186|gb|EDN63437.1| F1F0 ATP synthase beta subunit [Saccharomyces cerevisiae YJM789]
 gi|190409593|gb|EDV12858.1| F(1)F(0)-ATPase complex beta subunit [Saccharomyces cerevisiae
           RM11-1a]
 gi|207343779|gb|EDZ71135.1| YJR121Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|323332907|gb|EGA74310.1| Atp2p [Saccharomyces cerevisiae AWRI796]
 gi|323354292|gb|EGA86135.1| Atp2p [Saccharomyces cerevisiae VL3]
          Length = 511

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|115391911|ref|YP_778499.1| ATP synthase CF1 beta subunit [Jasminum nudiflorum]
 gi|122164964|sp|Q06RC2|ATPB_JASNU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|110456232|gb|ABG74637.1| ATPase beta subunit [Jasminum nudiflorum]
          Length = 498

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+  S  +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVSFPSGKMPNIYNALVVQG--RDTVGQAINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|323304290|gb|EGA58064.1| Atp2p [Saccharomyces cerevisiae FostersB]
          Length = 511

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|183206492|gb|ACC54444.1| ATP synthase beta subunit [Campanula saxatilis]
          Length = 498

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFAGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|260551342|ref|ZP_05825543.1| membrane-bound ATP synthase [Acinetobacter sp. RUH2624]
 gi|260405656|gb|EEW99147.1| membrane-bound ATP synthase [Acinetobacter sp. RUH2624]
          Length = 519

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDEPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSAEYVEKFTNGAVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|149375664|ref|ZP_01893433.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893]
 gi|149360066|gb|EDM48521.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893]
          Length = 464

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G+I  I      V      V  + D ++ +G  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGHIVQIIGAVIDVEFPRDSVPNVYDALLLEGGETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G    + G+   +       GR+++ LG+PID    +G+ +    I  K P   ++
Sbjct: 60  GLKRGLKADNTGKAISVPVGTQTLGRIMDVLGRPIDEQGEIGEEE-RWAIHRKAPGYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 SASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQERI--TSTKTGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLV 373
           V  D+  DP   +  S LD  +VL+R +A +G YP +DPL S SR  D     D   ++ 
Sbjct: 297 VPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDPLVIGDEHYEVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQTNLQRYKELKDIIAILGMDELSEED-KLTVARARKIERFLSQP 402


>gi|34539237|gb|AAQ74502.1| F1-ATPase alpha subunit [Calopogon tuberosus]
          Length = 412

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 162/407 (39%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    +  GDLV  
Sbjct: 1   GDGIARVFGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAMKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELLIGDRQTGKTAIAIDTILNQKQMNSRGTSESDTLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G  TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGGSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|315923927|ref|ZP_07920155.1| ATP synthase F1 sector alpha subunit [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622767|gb|EFV02720.1| ATP synthase F1 sector alpha subunit [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 499

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 108/434 (24%), Positives = 185/434 (42%), Gaps = 19/434 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N E + ++ ED   N      V + G + ++     +V  +++    G+ V  +      
Sbjct: 2   NSEQIIRVLEDEIANFNRDDNVREVGTVLTVGDGIVSVYGMNK-AFYGEVVTFESGER-- 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
            G V+ I  D++     G   +++ G  V   G    +     + GRV+NALG P+DG  
Sbjct: 59  -GMVLDIGSDLIRCILFGRDRDVAEGMEVHRTGEQMAVPVGDAFLGRVVNALGDPLDGKG 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D S  + S  P  ++RQ V+   +TG+  ID   P+  GQR  +      GK+T+
Sbjct: 118 PIS-ADGSRPVESPAPGILDRQPVDTPMETGMLAIDSMFPIGRGQRELIIGDRQTGKTTI 176

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
              +M  +       +   +G++   V +        D L  S++V A++ +   L+ +A
Sbjct: 177 AVDTMLNQKGKDVVCVYVAIGQKASSVAQLARTLEAHDALDYSIIVSASAADPASLQYIA 236

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   IAE++   G +VL+I D +++ A + R ++   G  P    YP  VF    RLL
Sbjct: 237 PYTGTAIAEHYMHAGRDVLIIYDDLSKHAVAYRTLSLLLGRSPGREAYPGDVFYLHSRLL 296

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER          G+ITA+  V     + +  I  ++ SI DG I L  +L   G  P V+
Sbjct: 297 ERSSHLSDALGGGSITALPIVETQSGDVSAYIPTNIISITDGQIFLESALFHAGTRPAVN 356

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A +   K    S+   + ++ E         +   +D      +     
Sbjct: 357 VGLSVSRVGGAAQTGAMKAASGSIRIDLAQYRELE---TFTQFSSDLDDATKAQLGYGQR 413

Query: 413 IYDFLKQSPSDLSS 426
           + + LKQ      S
Sbjct: 414 LMELLKQPVHSPMS 427


>gi|262376920|ref|ZP_06070147.1| ATP synthase F1, alpha subunit [Acinetobacter lwoffii SH145]
 gi|262308265|gb|EEY89401.1| ATP synthase F1, alpha subunit [Acinetobacter lwoffii SH145]
          Length = 519

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 180/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V +  +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LYGMALNLEQDSVGVVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   +  
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMLY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSADYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|6561653|gb|AAF16997.1|AF197665_1 ATPase alpha subunit [Chloranthus multistachys]
          Length = 411

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 166/403 (41%), Gaps = 23/403 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGRE 201
           D   P+  GQR  +      GK+ +      +                 +   +G++   
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D ++
Sbjct: 176 VAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGD 318
           + A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     
Sbjct: 236 KQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAG 295

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S   
Sbjct: 296 DVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGSSKL 355

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            + ++ E   +  +  +   +D +     ++   + +  KQ  
Sbjct: 356 ELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQ 395


>gi|59802447|ref|YP_209159.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA 1090]
 gi|194100111|ref|YP_002003251.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae NCCP11945]
 gi|239998099|ref|ZP_04718023.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|240013280|ref|ZP_04720193.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI18]
 gi|240015728|ref|ZP_04722268.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA6140]
 gi|240079862|ref|ZP_04724405.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
 gi|240114817|ref|ZP_04728879.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
 gi|240120352|ref|ZP_04733314.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID24-1]
 gi|240122656|ref|ZP_04735612.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
 gi|240124844|ref|ZP_04737730.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
 gi|260441369|ref|ZP_05795185.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|268593951|ref|ZP_06128118.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268596007|ref|ZP_06130174.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268600473|ref|ZP_06134640.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268681255|ref|ZP_06148117.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268683425|ref|ZP_06150287.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
 gi|291044726|ref|ZP_06570435.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|293397825|ref|ZP_06642031.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62]
 gi|75432313|sp|Q5F4Z0|ATPB_NEIG1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740654|sp|B4RJG0|ATPB_NEIG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|59719342|gb|AAW90747.1| putative ATP synthase beta chain [Neisseria gonorrhoeae FA 1090]
 gi|193935401|gb|ACF31225.1| ATP synthase subunit B [Neisseria gonorrhoeae NCCP11945]
 gi|268547340|gb|EEZ42758.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02]
 gi|268549795|gb|EEZ44814.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19]
 gi|268584604|gb|EEZ49280.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18]
 gi|268621539|gb|EEZ53939.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332]
 gi|268623709|gb|EEZ56109.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679]
 gi|291011620|gb|EFE03616.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2]
 gi|291611771|gb|EFF40840.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62]
 gi|317165543|gb|ADV09084.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 465

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 181/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVSNTGSPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + S V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D     AV +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLAVMRARKIQRFLSQP 408


>gi|114049501|ref|YP_740051.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-7]
 gi|123030131|sp|Q0HPG1|ATPB_SHESR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113890943|gb|ABI44994.1| ATP synthase F1, beta subunit [Shewanella sp. MR-7]
          Length = 463

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ S N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKITGEGSCN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID   ++G+ +    I    P 
Sbjct: 60  GTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGAIGEEE-RYVIHRSAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDDD-KMTVSRARKIERFLSQP 406


>gi|146313762|ref|YP_001178836.1| F0F1 ATP synthase subunit beta [Enterobacter sp. 638]
 gi|166990369|sp|A4WGF5|ATPB_ENT38 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145320638|gb|ABP62785.1| ATP synthase F1 subcomplex beta subunit [Enterobacter sp. 638]
          Length = 460

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ D    I    P    
Sbjct: 61  DGLRRGLAVKDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEED-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|161830152|ref|YP_001597761.1| F0F1 ATP synthase subunit beta [Coxiella burnetii RSA 331]
 gi|189081330|sp|A9NBD0|ATPB_COXBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161762019|gb|ABX77661.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 331]
          Length = 461

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 188/406 (46%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G    I      V      V      +   +N+  L    ++   +V    +G  E 
Sbjct: 4   AKSGTTIEIIGAVVDVEFPRHAVPKVYDALQVDENNLTLEVQQQLGDGVVRTIAMGSTEG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V +  +   +       GR++N LG+PID    +   +  + I    P  + + 
Sbjct: 64  LKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 123 GTTELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL 
Sbjct: 183 ERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V
Sbjct: 243 IDNIFRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD  +VL+R +AE G YP +DPL S SR  D      +  ++  
Sbjct: 301 PADDLTDPSPATTFAHLDATVVLSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R+EE +DI  I G     +    +AV +   I  FL Q 
Sbjct: 361 GVQETLQRYEELKDIIAILGMDELSEDD-KRAVRRARKIQRFLSQP 405


>gi|170701290|ref|ZP_02892256.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
 gi|170133813|gb|EDT02175.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ambifaria IOP40-10]
          Length = 463

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 158/418 (37%), Positives = 233/418 (55%), Gaps = 9/418 (2%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRIN 66
           A   E  ++      G +  +      V+ L     LG+    +      L   +V+  +
Sbjct: 33  AMERELRARAQPAACGKVQEVIGTLVRVSGLD--ATLGELCELRSPEGALLQRAEVVGFS 90

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            ++  + P G    +S    V    R   +       GRVI++LG+PIDG   L + D  
Sbjct: 91  RNVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPRLLGRVIDSLGEPIDGKGPL-ECDEW 149

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +++  P  M+R  V+    TG+RV+D    L  GQR+G+FA +G+GKSTL+ MFAR  
Sbjct: 150 QPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLMGMFARGA 209

Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D  +I+L+GERGREVREF E  LG + + +SVVV ATSD S I R  A   A  +AEY
Sbjct: 210 RCDVNVIALIGERGREVREFCEHILGPEGMARSVVVCATSDRSSIERAKAAYAATAVAEY 269

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G  VLL++DS+TRFA + REI    GE P  RG+P S+F+ELPRLLER G SE   
Sbjct: 270 FRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLERAGRSEL-- 327

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITA+ +VL + ++  DPIA+ VR ILDGH++L+R +A + RYP +D L S+SR+  + 
Sbjct: 328 GSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGSLSRVMTQV 387

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            S +       +  L+ + +E   +  +G Y+ G D + D+A+ ++  I  FL Q   
Sbjct: 388 VSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIARIDAIRAFLGQPTD 445


>gi|293611149|ref|ZP_06693447.1| hypothetical protein HMPREF0013_03309 [Acinetobacter sp. SH024]
 gi|292826400|gb|EFF84767.1| hypothetical protein HMPREF0013_03309 [Acinetobacter sp. SH024]
 gi|325124139|gb|ADY83662.1| F0F1 ATP synthase subunit alpha [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 514

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 60  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPID-AKLTDAVEKVAPGVIWRQSVDEPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 178 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSADYVEKFTNGAVTGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQYAPYS 441


>gi|186886243|gb|ACC93524.1| ATPase F1 alpha subunit [Juncus cooperi]
          Length = 363

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 21/370 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 176

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 177 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 236

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 237 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 296

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 297 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 353

Query: 392 IGGYRPGVDL 401
              +   +D 
Sbjct: 354 FAQFGSDLDA 363


>gi|118498208|ref|YP_899258.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           novicida U112]
 gi|194324392|ref|ZP_03058165.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208780235|ref|ZP_03247577.1| ATP synthase F1, beta subunit [Francisella novicida FTG]
 gi|254373552|ref|ZP_04989039.1| ATP synthase subunit B [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|166201705|sp|A0Q8D9|ATPB_FRATN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118424114|gb|ABK90504.1| ATP synthase, F1 sector, subunit beta [Francisella novicida U112]
 gi|151571277|gb|EDN36931.1| ATP synthase subunit B [Francisella novicida GA99-3549]
 gi|194321457|gb|EDX18942.1| ATP synthase F1, beta subunit [Francisella tularensis subsp.
           novicida FTE]
 gi|208743884|gb|EDZ90186.1| ATP synthase F1, beta subunit [Francisella novicida FTG]
 gi|332678943|gb|AEE88072.1| ATP synthase beta chain [Francisella cf. novicida Fx1]
          Length = 458

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 112/410 (27%), Positives = 183/410 (44%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  +      V             V+   N    G V+     I   +V    +G
Sbjct: 1   MSTGKIIQVIGAVIDVEFARDNTP----KVYDALNVVEAGLVLEVQQQIGDGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +      +       GR++N LG+PID    +   +    I    P  
Sbjct: 57  SSDGLRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTE-KRSIHQAPPAY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                  +  +TGI+V+D+  P   G ++G+F G+G+GK+  +     +   +     + 
Sbjct: 116 DELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    L+ +TIAE F  +  +
Sbjct: 176 AGVGERTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  S LD  IVL+R +AE G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   ++  ++ R++E +DI  I G     D    K V +   I  FL Q 
Sbjct: 354 ETARAVQKVLQRYKELKDIIAILGMDELSDED-KKIVDRARKIQRFLSQP 402


>gi|314927447|gb|EFS91278.1| ATP synthase F1, alpha subunit [Propionibacterium acnes HL044PA1]
          Length = 545

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 91/439 (20%), Positives = 175/439 (39%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    ++Y     V+   G + +       V  L       + +  +      +G  +
Sbjct: 13  DALDNFVQNYEPETAVREEVGTVVTSGDGIAHVEGL-PSAMANELLRFENG---TMGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G  V   G    +     + GRV++A+G P+DG   +   
Sbjct: 69  NLEERQIGVVVLGDSDGIDEGSTVRGTGEVLSVPVGEGYLGRVVDAMGSPVDGLGEIKGI 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  +    M+RQ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGRRALEIQAAGVMDRQEVREPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  V E             + +V A + +    +
Sbjct: 189 INQKGNWESGDPKKQVRCIYVAIGQKGSTVAEVKGALEKAGAMEYTTIVHAPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL+I D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YIAPYAGSAIGQHWMYQGKHVLIIFDDLTKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDDLGGGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + ++   RD++    +   +D    + + +
Sbjct: 369 AVDVGISVSRVGGAAQIKAMKSVAGTLKISLAQY---RDMQAFAMFASDLDDTSRRQLDR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ        +
Sbjct: 426 GARLMELLKQDQFSPYPVE 444


>gi|169303158|gb|ACA53176.1| ATP synthase alpha subunit [Aglaothamnion hookeri]
          Length = 385

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 92/380 (24%), Positives = 155/380 (40%), Gaps = 9/380 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G +  +      V  L +    G+ +         +G  + +  D V +  +G G 
Sbjct: 7   IANVGTVLQVGDGIARVYGLDE-AMAGELLQFD-DQEQTIGIALNLESDNVGVVLMGDGR 64

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G+  +I     + GRV+N L +PID    +     +  I S  P  + R
Sbjct: 65  NILEGSSVKSTGKIAQIPVGQEFLGRVVNPLAEPIDAKG-IPTASETRLIESYAPGIIGR 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
           Q V +  +TGI  ID   P+  GQR  +      GK+ +      +        +   +G
Sbjct: 124 QSVCEPLQTGITAIDAMIPIGRGQRELIIGDRQTGKTAVALDTIINQKGQDVICVYVAIG 183

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + +           +++V A +D+   L+ +AP T   +AEYF   G   L+I
Sbjct: 184 QKASSVAQVVSVLEEKGALDYTIIVAANADDPATLQYIAPYTGAALAEYFMYSGKATLVI 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +T+ A + R+++      P    YP  VF    RLLER      +   G++TA+  +
Sbjct: 244 YDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNSDLGGGSMTALPII 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A     K++ 
Sbjct: 304 ETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQIKAMKQVA 363

Query: 374 SSLTHLIHRFEETRDIRLIG 393
             L   + +F E        
Sbjct: 364 GKLKLELAQFAELEAFSQFA 383


>gi|70733501|ref|YP_263276.1| F0F1 ATP synthase subunit alpha [Pseudomonas fluorescens Pf-5]
 gi|115312265|sp|Q4K3A7|ATPA_PSEF5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|68347800|gb|AAY95406.1| ATP synthase F1, alpha subunit [Pseudomonas fluorescens Pf-5]
          Length = 514

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 96/442 (21%), Positives = 185/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIEKLDVTSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLNNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + D     +   +G++   +   +     +     +++V A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKDSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIIVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|332671304|ref|YP_004454312.1| ATP synthase F1 subunit alpha [Cellulomonas fimi ATCC 484]
 gi|332340342|gb|AEE46925.1| ATP synthase F1, alpha subunit [Cellulomonas fimi ATCC 484]
          Length = 542

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 95/447 (21%), Positives = 174/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L    + Y     +  + G ++        V  L       + +  +      LG  +
Sbjct: 13  AALDSFVKTYEPTGAVSEEVGRVTLAGDGIAQVEGL-PGAMANELLRFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    +     + GRV++ LG+PIDG   +   
Sbjct: 69  NLDVREIGVVVLGEFTGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGQPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMARKSVHEPLQTGIKAIDSMIPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQKANWESGDPTKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYGGKHVLVVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K +  +L   + +F           +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQVKAMKSVSGTLKLDLAQFRSLE---AFAMFASDLDATSRAQLAR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   S  + ED    I  
Sbjct: 425 GARLTELLKQGQYSPFAVEDQVASIWA 451


>gi|163848585|ref|YP_001636629.1| F0F1 ATP synthase subunit beta [Chloroflexus aurantiacus J-10-fl]
 gi|222526520|ref|YP_002570991.1| F0F1 ATP synthase subunit beta [Chloroflexus sp. Y-400-fl]
 gi|190358278|sp|A9WGS4|ATPB_CHLAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808139|sp|B9LBM0|ATPB_CHLSY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|163669874|gb|ABY36240.1| ATP synthase F1, beta subunit [Chloroflexus aurantiacus J-10-fl]
 gi|222450399|gb|ACM54665.1| ATP synthase F1, beta subunit [Chloroflexus sp. Y-400-fl]
          Length = 471

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 116/412 (28%), Positives = 189/412 (45%), Gaps = 18/412 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G I  I  V          V        +  G     + +V + +   +V    +G  + 
Sbjct: 5   GVIQEIIGVVIRAKFPEDEVPEIYNAIEIPLGNGDRLVCEVQQQLGNGVVKAVAMGSTDG 64

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   GR   +       GRV N LG PIDG   +G       I    P    + 
Sbjct: 65  LRRGLEVIDTGRPIAVPVGPATLGRVFNVLGDPIDGMGPIGPEVERRPIHRDPPSFEEQN 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVG 196
              + F+TGI+VID+  P   G +  +F G+G+GK+ ++     +   ++    + + VG
Sbjct: 125 TQAQIFETGIKVIDLIAPFTRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVG 184

Query: 197 ERGREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  + I +              K+V+V    +E P  R    LTA+T+AEYF  +G
Sbjct: 185 ERSREGNDLIHEMKEARIDENTTVFDKTVMVFGQMNEPPGARLRVGLTALTMAEYFRDEG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            ++LL +D+I RF  +  E+++  G +P   GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 245 RDILLFIDNIFRFVQAGSEVSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D++ DP   +V S LD  I L RS+AE   +P VDPLAS SR+ D      +
Sbjct: 303 MQAVYVPADDYTDPAPATVFSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +  ++ R+++ +DI  I G     D      V +   I  F  Q 
Sbjct: 363 HYRVAQEVKRVLQRYKDLKDIIAILGMEELSDED-KLTVQRARKIELFFSQP 413


>gi|254201537|ref|ZP_04907901.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
 gi|147747431|gb|EDK54507.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH]
          Length = 469

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 191/414 (46%), Gaps = 11/414 (2%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           +  S   +V+G  +  I +V            + D ++ +G       Q  ++   +V  
Sbjct: 4   KAMSTAALVEGKIVQCIGAVIDVEFPRESMPKIYDALILEGSELTLEVQ-QQLGDGVVRT 62

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +G  + +  G +V + G    +       GR+++ LG+PID    + + +    I  K
Sbjct: 63  ICLGASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESENKRSIHQK 121

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +   
Sbjct: 122 APAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGG 181

Query: 191 --IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  
Sbjct: 182 YSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRD 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+I
Sbjct: 242 EGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 300 TSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 360 EEHYSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 412


>gi|315443369|ref|YP_004076248.1| ATP synthase F1 subcomplex subunit alpha [Mycobacterium sp. Spyr1]
 gi|315261672|gb|ADT98413.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium sp. Spyr1]
          Length = 548

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 179/448 (39%), Gaps = 28/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  +   +    EDY  +        + G +         V  L   V   + +   G  
Sbjct: 4   LTISASDIEGAIEDYVSSFTADSEREEIGTVIDAGDGIAHVEGL-PSVMTQELLEFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + ++   V    +G  E+I  G  V   G    +     + GRVIN LG+PID
Sbjct: 62  --VLGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSVPVGDAFLGRVINPLGQPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D    +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 120 GQGDI-ESDTRRALELQAPSVVQRQGVSEPLQTGIKAIDSQTPIGRGQRQLIIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+L+     +  D     + +   +G++G  +               + +V A 
Sbjct: 179 TAVAVDTILNQRKAWETGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP T   I +++   G +VL++ D +++ A + R I+      P    +P
Sbjct: 239 ASDAAGFKWLAPYTGSAIGQHWMYDGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG   L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQYRELESFAA---FASDLDA 415

Query: 402 ILDKAVHQVPIIYDFLKQSP-SDLSSED 428
                + +   + + LKQ   +  S ED
Sbjct: 416 ASKAQLDRGARLVELLKQPQYTPYSVED 443


>gi|254479260|ref|ZP_05092603.1| ATP synthase F1, beta subunit [Carboxydibrachium pacificum DSM
           12653]
 gi|214034798|gb|EEB75529.1| ATP synthase F1, beta subunit [Carboxydibrachium pacificum DSM
           12653]
          Length = 461

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/405 (28%), Positives = 189/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           GYI+ +      +    +   + + +     + + + +V   I  +IV    +   + + 
Sbjct: 4   GYITQVIGPVVDIRFEGELPPINNAIKIPMGDRELVVEVAQHIGDNIVRCVAMASTDGLR 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR+ N LG+PID    +      M I  K P    +   
Sbjct: 64  RGMECIDTGGPIMVPVGKGVLGRMFNVLGQPIDELGEVKDVKY-MPIHKKPPSFEEQNPA 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +     I + VGER
Sbjct: 123 TEILETGIKVIDLLTPYPKGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFAGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  E   +      + K+  V    +E P  R    L  +TIAEYF  +   +VLL +
Sbjct: 183 SREGNELWLEMHEAGVIDKTAFVFGQMNEPPGARMRVGLAGLTIAEYFRDEEHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V 
Sbjct: 243 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +      +   +   
Sbjct: 301 ADDLTDPAPATTFAHLDATTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 VQEILQRYKELQDIIAILGMEELTEED-RLIVYRARKIQRFLSQP 404


>gi|154489789|ref|ZP_02030050.1| hypothetical protein PARMER_00017 [Parabacteroides merdae ATCC
           43184]
 gi|154089514|gb|EDN88558.1| hypothetical protein PARMER_00017 [Parabacteroides merdae ATCC
           43184]
          Length = 526

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 103/454 (22%), Positives = 175/454 (38%), Gaps = 38/454 (8%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E  S  +  +  G +  ++     +  L       + +            V+ 
Sbjct: 12  AILRQQLEGISTGIRTEEVGTVLQVSDGVARIYGL-DNAEANELLQFDNGME---AIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  +++  GD+V   GR   I+ S    GRVI+ LG PIDG   +    
Sbjct: 68  LEEDNVGAVLLGPTDQVKEGDIVKRTGRIASINVSEGMIGRVIDPLGNPIDGKGEITGEA 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK      T++
Sbjct: 128 CEMPLERKAPGVIFRQPVNEPLQTGIKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +     +  +    I   +G++G  V   +           +++V AT+ +   ++  AP
Sbjct: 188 NQRGNYEAGNPVYCIYVAIGQKGSTVASLVNTLQEKGAMDYTIIVSATASDPAAMQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDSGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQPEVARQMNDLPDSMKDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     +F E       GG 
Sbjct: 368 IFLETDLFNQGNRPAINVGISVSRVGGNAQLKAMKKVAGTLKIDQAQFRELESFSKFGGE 427

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP-SDLSSED 428
              +D +    + +       L Q   S +  ED
Sbjct: 428 ---MDAVTAFTIDKGQKNTQLLIQPQYSPMPVED 458


>gi|259147584|emb|CAY80835.1| Atp2p [Saccharomyces cerevisiae EC1118]
          Length = 511

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|145596144|ref|YP_001160441.1| F0F1 ATP synthase subunit alpha [Salinispora tropica CNB-440]
 gi|189081315|sp|A4XAW4|ATPA_SALTO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145305481|gb|ABP56063.1| ATP synthase F1, alpha subunit [Salinispora tropica CNB-440]
          Length = 550

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 177/439 (40%), Gaps = 27/439 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  + E +    E Y  +        + G ++        V  L       + +  +   
Sbjct: 4   LTISTEEIRGALERYVSSYSADVSREEVGTVADAGDGIAHVEGL-PSTMTNELLEFEDG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              +G  + +++  + +  +G    I  G  V   GR         + GRV+NALG+PID
Sbjct: 62  --TIGVALNLDVREIGVVVLGDFAGIEEGQRVKRTGRVLSAPVGDAFLGRVVNALGEPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +   E+  + P  M+R+ V++  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 120 GLGDI-PNEGFRELELQAPNVMSRKSVDEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+L+        D     + I   VG++   +               + +V + 
Sbjct: 179 TTVALDTILNQRDNWRSGDPKKQVRCIYVAVGQKASTIASIKGVLEEAGAMEYTTIVASP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +    + +AP T  +I +++   G +VL++ D +++ A + R ++      P    YP
Sbjct: 239 ASDPAGFKYLAPYTGSSIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDEMGGGSMTGLPIIETKANDISAFIPTNVISITDGQIFLETD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     KK+  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGTSVSRVGGSAQVKPMKKVSGSLRLNLAQYRELE---AFAAFASDLDK 415

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                + +   + + LKQ 
Sbjct: 416 ASRAQLERGSRLVELLKQP 434


>gi|118917348|dbj|BAF40460.1| ATP synthase beta subunit [Pycnocoma cornuta]
          Length = 489

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAIA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       IS
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGIS 189

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G   RE      +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|114448862|gb|ABI74954.1| ATP synthase alpha subunit [Leucocrinum montanum]
          Length = 379

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 89/384 (23%), Positives = 157/384 (40%), Gaps = 22/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 3   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  ++G++ +D   P+  GQR 
Sbjct: 60  VVDALGVPIDGKGSLSDHE-RRRVEVKAPGIIERKSVHEPMQSGLKAVDSLVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 119 LIIGDRQTGKTAIAIDTILNQKQMNERGTSSSETLYCVYVAIGQKRSTVAQLVQILPEAN 178

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 179 ALDYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 238

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 239 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 298

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 299 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 355

Query: 391 LIGGYRPGVDLILDKAVHQVPIIY 414
               +   +D      +++   + 
Sbjct: 356 AFAQFGSDLDAATQALLNRGARLT 379


>gi|121608101|ref|YP_995908.1| flagellar protein export ATPase FliI [Verminephrobacter eiseniae
           EF01-2]
 gi|121552741|gb|ABM56890.1| flagellar protein export ATPase FliI [Verminephrobacter eiseniae
           EF01-2]
          Length = 470

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 151/437 (34%), Positives = 229/437 (52%), Gaps = 23/437 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
             G ++ +T +      L   V     V   G+ +  L +V+  + +  ++ P G    +
Sbjct: 28  SSGTLTRLTGLVLEAVGLRVPVGAQCMVGMPGQ-APVLAEVVGFSGERTFLMPAGDTHGL 86

Query: 82  SLGDLV-------------------FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             G  V                      G  R+       GRV++A G P+D    + + 
Sbjct: 87  CSGARVLPCAPDMPGPVWGEPSRPIRRTGVLRLPMGNGLLGRVVDAQGLPLDHRGPV-QD 145

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            +   +      AM R  V +   TG+R I+    +  GQR+G+ AGSG+GKS LL M A
Sbjct: 146 TVLAPMARDRINAMERDPVRQPLDTGVRAINALLTVGRGQRLGLLAGSGVGKSVLLGMMA 205

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D +++ L+GERGREV+EF+ED LG D   +SVVV A +D  P+LR      A  +
Sbjct: 206 RYTGADVIVVGLIGERGREVKEFVEDILGADGRARSVVVAAPADAPPLLRMQGASYATAV 265

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F  +G +VLL+LDS+TR+A + REIA   GE P  +GYP S F+ LP+L+ER G   
Sbjct: 266 AEHFRDQGRHVLLLLDSLTRYAMAQREIALAIGEPPATKGYPPSCFARLPQLVERSGNGL 325

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           + +G+ITA  +VL +GD+ +DP+AD+ R+ILDGHIVL+R+LAE G +P +D   S SR+ 
Sbjct: 326 QGQGSITAFHTVLTEGDDPHDPVADAARAILDGHIVLSRALAEAGHFPAIDIEQSSSRVM 385

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +       +L      L  R+++ RD+  +G Y  G D  LD+A+   P +  FL+Q  
Sbjct: 386 HRLVPDRHLELARRFRALYSRYQKGRDLLQVGAYASGSDPALDEAIRLQPQMAQFLQQDL 445

Query: 422 SDLSS-EDVFQEITKKL 437
              ++ E     +   L
Sbjct: 446 HQAATLEQSVAALAAAL 462


>gi|108773085|ref|YP_635994.1| ATP synthase CF1 beta subunit [Scenedesmus obliquus]
 gi|118573743|sp|Q1KVT0|ATPB_SCEOB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|88696651|gb|ABD48277.1| CF1 beta subunit of ATP synthase [Scenedesmus obliquus]
          Length = 480

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNL-----GQVIRINLDI-VYICPVG 76
           G IS I      +     Q   + + +  + KN+  L      +V ++  D  V    + 
Sbjct: 10  GKISQIIGPVLDIAFGQGQVPNIYNALTIKAKNAAGLEMSVTCEVQQLLGDSCVRAVAMN 69

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+   +       GR+ N LG+P+D    + K + S+ I    P  
Sbjct: 70  PTDGLMRGMEVLDTGKPLNVPVGKSTLGRIFNVLGEPVDNLGPV-KNEESLPIHRTAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 129 VDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 189 AGVGERTREGNDLYTEMKESGVIVEKNLIDSKVALVYGQMNEPPGARMRVALTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 366

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +       S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 WILGEKHYGCAQSVKRTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLSQP 423


>gi|86605139|ref|YP_473902.1| F0F1 ATP synthase subunit beta [Synechococcus sp. JA-3-3Ab]
 gi|118573767|sp|Q2JX57|ATPB_SYNJA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86553681|gb|ABC98639.1| ATP synthase F1, beta subunit [Synechococcus sp. JA-3-3Ab]
          Length = 477

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 111/419 (26%), Positives = 186/419 (44%), Gaps = 18/419 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCL------GDFVVHQGKNSDNLGQVIRINLDI 69
           +       GYI+ +          S  +         +     G       +V ++  D 
Sbjct: 4   ATATATNVGYITQVIGPVIDAEFPSGKLPEIYNALKVEATTESGLKVKVTFEVQQLLGDN 63

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G    +       GR+ N LG+P+D  + +   + +  
Sbjct: 64  RVRAVAMSSTDGLVRGMPVVDTGAPITVPVGEATLGRIFNVLGEPVDQGEPVQAKEFA-P 122

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    PP +      + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   
Sbjct: 123 IHRSAPPFVELTVKPEPFETGIKVIDLLAPFKRGGKVGLFGGAGVGKTVLIQELIHNIAE 182

Query: 188 DKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +   +     +  K  +V    +E P  R    LTA+T+AE
Sbjct: 183 EHSGLSVFAGVGERTREGNDLYNEMKESGVLDKVALVYGQMNEPPGARMRVGLTALTMAE 242

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 243 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERI--TST 300

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT+V +V V  D+  DP   +  + LD  +VL+RSLA +G YP VDPL S S +  
Sbjct: 301 KQGSITSVQAVYVPADDLTDPAPATTFAHLDSTVVLSRSLAAKGIYPAVDPLDSSSTILQ 360

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 ADIVGEEHYNTAQAVKQTLQRYKELQDIIAILGLDELSEED-KLVVARARRIERFLSQP 418


>gi|238752875|ref|ZP_04614340.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
 gi|238708914|gb|EEQ01167.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
          Length = 439

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 221/426 (51%), Gaps = 14/426 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           NL    G +  +  +      +   + +G     +   +  +  QV+  + ++ Y+ P  
Sbjct: 15  NLARVAGRLVRVNGILL--ESVGCRLAIGQRCRIESAAATFIDAQVVGFDREVTYLMPFK 72

Query: 77  IGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
             + +  G  VF     G   I     W GRV+N LG+PID    L  GD  ++      
Sbjct: 73  QPDGLIGGARVFPSYLDGELMI--GDSWLGRVVNGLGEPIDDKGPLS-GDTPLQQQLPQI 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + RQ V      G++ I+    +  GQR+G+ AGSG+GKS LL M  R    D V++ 
Sbjct: 130 HPLQRQPVSAPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSMLLGMMTRYTQADVVVVG 189

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI        + KSVV+ A +DESP++R  A     +IA Y+  KG +V
Sbjct: 190 LIGERGREVKEFIEHSLQASGMAKSVVIAAPADESPLMRIKATELCHSIATYYRDKGKDV 249

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S    G +TA+ +
Sbjct: 250 LLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSSG-SGTMTAIYT 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPI D  R++LDGHIVL R LAE G YP +D   S+SR  ++    ++   
Sbjct: 309 VLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDISQSISRCMNQISPDNQILS 368

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              L      + E + +  +GGY  G D  +D+AV   P I DFL+Q   ++S       
Sbjct: 369 ARFLKQCYADYMEIKPLIPLGGYVAGADPRVDQAVQYHPAIIDFLRQ---EVSQPATLAA 425

Query: 433 ITKKLQ 438
             + L 
Sbjct: 426 TLEHLN 431


>gi|223667985|gb|ACN11588.1| F1-ATPase alpha subunit [Pogonia minor]
          Length = 412

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 159/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKRTGSIVDVPAGKAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 120 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 179

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 180 AFEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 239

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 240 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 299

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 300 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 356

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 357 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 387


>gi|160943200|ref|ZP_02090436.1| hypothetical protein FAEPRAM212_00686 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445439|gb|EDP22442.1| hypothetical protein FAEPRAM212_00686 [Faecalibacterium prausnitzii
           M21/2]
          Length = 470

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G I  +      V     +   L + +    + ++   +V + +N   V    +   E +
Sbjct: 4   GTIIRVAGPVVDVQFTAGRLPALQEALTVTAEGTERTMEVTQHVNETTVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G            GR+ + LG+PIDG  ++ +      I  K P    ++ 
Sbjct: 64  GKGMPVEATGHGLTAPVGEGTLGRMFDPLGRPIDGKGAVDELP-HWPIHRKAPGFAEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 ATEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGCDLWGEMNASGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +  + G+IT+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALMGRMPSAVGYQPTLANELGALQERI--TSTKDGSITSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPLAS SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G    +D      V +   +  FL Q 
Sbjct: 361 KVQSILQRYQELQDIIAILGMDE-LDENDKLTVMRARKLQKFLSQP 405


>gi|228016051|gb|ACP50889.1| ATP synthase CF1 alpha subunit [Pinus rzedowskii]
          Length = 507

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 100/430 (23%), Positives = 172/430 (40%), Gaps = 19/430 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
            ++ ++ +     K       V   G +  +      +  L + V  G+ V         
Sbjct: 5   QIDEISSIIRKKIKQYNDAVGVGNLGTVLQVGDGIALIHGLYE-VMAGELVEF---GDGT 60

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +PID   
Sbjct: 61  VGIALNLGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDXXX 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                             ++R+ V +  +TG+  ID   P+  GQR  +      GK+ +
Sbjct: 121 XXXXXXXXXXXXXXX-XXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 179

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
            +    +        +   +G+R   V + +  +        ++VV  T+D    L+ +A
Sbjct: 180 ATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T  T+AEYF  K     +I D +++ A + R+++      P    YP  VF    RLL
Sbjct: 240 PYTGATLAEYFMYKKQXXSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 299

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++
Sbjct: 300 ERAAKLSSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAIN 359

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+   L   + +F E         +   +D      + +   
Sbjct: 360 VGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQR 416

Query: 413 IYDFLKQSPS 422
           + + LKQS S
Sbjct: 417 LRELLKQSQS 426


>gi|126667606|ref|ZP_01738575.1| ATP synthase F1, alpha subunit [Marinobacter sp. ELB17]
 gi|126627875|gb|EAZ98503.1| ATP synthase F1, alpha subunit [Marinobacter sp. ELB17]
          Length = 514

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 100/447 (22%), Positives = 188/447 (42%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ + +   + L         G I S+      +  L+  V  G+ +       
Sbjct: 3   QLNPSEISDIIKKRIEKLDISSEAKNEGTILSVADGIVLIHGLAD-VMSGEMIEFANGE- 60

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  E+++ G  V   GR   +       GRV++ LG PIDG
Sbjct: 61  --FGIALNLERDSVGAVVLGDYEDLAEGQKVRCTGRILEVPVGPELMGRVVDGLGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG   L+  +    P  + RQ V++  +TG++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGELGTT-LTDAVEKVAPGVIERQSVDQPIQTGMKAIDTMVPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++  + +   K I   +G++   +   +           ++VV A + +   ++ 
Sbjct: 178 AVAIDAIINQKNSGIKCIYVAIGQKQSSIAAIVRKLEEHGAMDHTIVVAAGAADPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGTTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVNADYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +L   G  P ++   SVSR+   A +   KKL  ++   + ++ E   +     +   +
Sbjct: 358 TNLFNSGIRPAMNAGISVSRVGGAAQTKIMKKLGGNIRLALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ+     S
Sbjct: 415 DEATRNQLEHGQRVTELMKQNQYSPMS 441


>gi|225420331|ref|ZP_03762634.1| hypothetical protein CLOSTASPAR_06675 [Clostridium asparagiforme
           DSM 15981]
 gi|225041017|gb|EEG51263.1| hypothetical protein CLOSTASPAR_06675 [Clostridium asparagiforme
           DSM 15981]
          Length = 506

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 176/420 (41%), Gaps = 15/420 (3%)

Query: 8   LAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L +  E+Y  +    + G +  +     T+  + Q    G+ V+ +       G V  + 
Sbjct: 18  LKEEIENYDLDTGDQEVGQVIWVGDGIATIYGMDQ-AMYGEIVLFENG---IKGMVQDVR 73

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + +     G    I  G  V    +   I     + GRVI+ LG PIDG   +   D  
Sbjct: 74  KNEIGCILFGSDTGIREGTKVTRTKKKAGIPVGEAFIGRVIDPLGAPIDGKGPIASEDYR 133

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I ++ P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++      + 
Sbjct: 134 -PIENEAPGIIDRKSVSVPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIAVDTILNQ 192

Query: 186 CF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
                  I   +G++   V   +      D +  S+V+ +T+ +   L+ +AP +   +A
Sbjct: 193 KGKDVICIYVAIGQKASTVAGIVSTLQKYDAMDYSIVLSSTASQPAPLQYIAPYSGTALA 252

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER      
Sbjct: 253 EYFMYKGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRLSD 312

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SVSR+
Sbjct: 313 ELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFAGMRPAVNVGLSVSRV 372

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   KK   S+   + +F E +   +   +   +D    + +     + + LKQ 
Sbjct: 373 GGAAQTKAMKKASGSIRIDLAQFREMQ---VFTQFSSDLDATTKEQLTYGDGLMELLKQP 429


>gi|187931020|ref|YP_001891004.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|226740203|sp|B2SEY1|ATPB_FRATM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|187711929|gb|ACD30226.1| ATP synthase, F1 sector, subunit beta [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 458

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 184/410 (44%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  +      V             V+   N    G V+     I   +V    +G
Sbjct: 1   MSTGKIIQVIGAVIDVEFARDNTP----KVYDALNVVEAGLVLEVQQQIGDGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +      +       GR++N LG+PID    +   +    I    P  
Sbjct: 57  SSDGLRRGMEVKNTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIEYTE-KRSIHQAPPAY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                  +  +TGI+V+D+  P   G ++G+F G+G+GK+  +     +   +     + 
Sbjct: 116 DELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    L+ +TIAE F  +  +
Sbjct: 176 AGVGERTREGNDFYYEMKDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  S LD  IVL+R +AE G YP VDPL S SR  D      D  
Sbjct: 294 AVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++  ++ R++E +DI  I G     D    K V +   I  FL Q 
Sbjct: 354 EIARAVQKVLQRYKELKDIIAILGMDELSDED-KKIVDRARKIQRFLSQP 402


>gi|300923896|ref|ZP_07139911.1| flagellar protein export ATPase FliI [Escherichia coli MS 182-1]
 gi|300419859|gb|EFK03170.1| flagellar protein export ATPase FliI [Escherichia coli MS 182-1]
          Length = 457

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 161/441 (36%), Positives = 241/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E  FQ + +  
Sbjct: 433 QQGIFERADWEASFQGLERIF 453


>gi|186886285|gb|ACC93545.1| ATPase F1 alpha subunit [Juncus thomsonii]
          Length = 367

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   VG++   V + ++     N 
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANA 176

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 177 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 236

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 237 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 296

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 297 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 353

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 354 FAQFGSDLDAATQ 366


>gi|160943202|ref|ZP_02090438.1| hypothetical protein FAEPRAM212_00688 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445441|gb|EDP22444.1| hypothetical protein FAEPRAM212_00688 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105218|emb|CBL02762.1| proton translocating ATP synthase, F1 alpha subunit
           [Faecalibacterium prausnitzii SL3/3]
          Length = 584

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 184/426 (43%), Gaps = 15/426 (3%)

Query: 2   QKNLETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +L TL    EDY       +GG + S       +  +++ V  G+ V  +       G
Sbjct: 85  KPSLATLKTRIEDYKPAETSAEGGVVISSADGIVHIDGMNRAV-YGEIVTFENGAK---G 140

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            V  +  + + +      E + +G +V   G R  I     + GRVI+ LG+PIDG   +
Sbjct: 141 MVESVEPEQLGVMLFDGAETVGVGTMVTRSGKRAGIPVGDAFLGRVISPLGEPIDGKGPI 200

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
            + +    I  + P  + RQ V+    TGI  ID   P+  GQR  +      GK+    
Sbjct: 201 -EAEGYNPIEKQAPSILERQSVDTPLHTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAT 259

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   +    ED         + +V AT+ +S  L+ +AP 
Sbjct: 260 DAILNQKDKDVLCIYVAIGQKASSIARVAEDLKKHGAMSYTTIVAATASDSAPLQYIAPY 319

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF +KG +VL++ D +++ A + R I+      P    YP  VF    RLLER
Sbjct: 320 AGTALAEYFMAKGKSVLIVYDDLSKHAVAYRAISLLLRRSPGREAYPGDVFYLHSRLLER 379

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  V     + +  I  +V SI DG I L  +L   G  P V+  
Sbjct: 380 SCRMRDDLGGGSITALPIVETQAGDVSAYIPTNVISITDGQIFLESALFNAGNRPAVNVG 439

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK  ++L   + +++E         +   +D    + +     + 
Sbjct: 440 LSVSRVGGAAQTKAMKKANANLRIELAQYKEME---SFAQFSSDLDAETRRQLEHGKALM 496

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 497 EMLKQP 502


>gi|255021376|ref|ZP_05293424.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
 gi|254969239|gb|EET26753.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC
           51756]
          Length = 460

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 156/404 (38%), Positives = 232/404 (57%), Gaps = 6/404 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81
            G +  +  +      +     +G        N   +  +V+  + + + +   G    +
Sbjct: 33  SGRLVRMVGLVLEAEGME--ASVGSRCRVIAANQRGIDAEVVGFHGERLQLMAAGDTHGV 90

Query: 82  SLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           +LG  V    G  + S S    GRVI+ LG+P+DG D++      + +M      MNR  
Sbjct: 91  ALGARVQLLPGEAQGSASPALLGRVIDGLGQPLDGGDAV-PNRTPIPLMGTPLNPMNRMP 149

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +      G+R I+    +  G R+G+FAGSG+GKS LL M AR+   D +++ L+GERGR
Sbjct: 150 IRHPLDVGVRSINALFTVGRGARMGLFAGSGVGKSVLLGMMARNTEADVIVVGLIGERGR 209

Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV+EFIED LG+  L+++VVV A +D   + R      A  +AEYF  +G +VLL++DS+
Sbjct: 210 EVKEFIEDILGEAGLRRAVVVAAPADAPALTRIRGAHLATALAEYFRDRGQHVLLLMDSL 269

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + REIA   GE P  RGYP SVF+ LP L+ER G   ++ G+ITA  +VL++GD+
Sbjct: 270 TRYAMAQREIALAVGEPPAVRGYPPSVFARLPALVERAGNGGRDGGSITAFYTVLMEGDD 329

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             DPIADS R+ILDGH+VL+RSLAE+G YP +D  AS+SR+      A + + +  L  L
Sbjct: 330 QQDPIADSARAILDGHLVLSRSLAEQGHYPAIDLEASISRVMPNIVPAAQLQALHRLKRL 389

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             R+ E RD+  +G Y  G+D +LD+AV   P I  FL+Q   +
Sbjct: 390 YGRYREQRDLIAVGAYSAGLDPVLDQAVQAYPAIEAFLQQDQRE 433


>gi|163850895|ref|YP_001638938.1| F0F1 ATP synthase subunit beta [Methylobacterium extorquens PA1]
 gi|218529719|ref|YP_002420535.1| F0F1 ATP synthase subunit beta [Methylobacterium chloromethanicum
           CM4]
 gi|240138026|ref|YP_002962498.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           AM1]
 gi|254560587|ref|YP_003067682.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           DM4]
 gi|163662500|gb|ABY29867.1| ATP synthase F1, beta subunit [Methylobacterium extorquens PA1]
 gi|218522022|gb|ACK82607.1| ATP synthase F1, beta subunit [Methylobacterium chloromethanicum
           CM4]
 gi|240007995|gb|ACS39221.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           AM1]
 gi|254267865|emb|CAX23731.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens
           DM4]
          Length = 485

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 111/427 (25%), Positives = 192/427 (44%), Gaps = 26/427 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +  + + S  + +V  ++  + V    +   E + 
Sbjct: 15  GKITQVIGPVVDVQFDDHLPEILNALETRNQGSRLVLEVAQQLGENTVRCIAMDTSEGLV 74

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR++N +G+PID    + + D    I    PP  ++   
Sbjct: 75  RGQEVRDTGAPIKVPVGHNTLGRIMNVIGEPIDEAGPI-QSDTLRAIHQPAPPYTDQSTE 133

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 134 SQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 193

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +  N+              K  +V    +ESP  R    LT +TIAE F
Sbjct: 194 TREGNDLYHEMIESNVNKNPKENGGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEDF 253

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 254 RDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TTTTKG 311

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD    L+RS+AE+G YP VDPL S SR+   A 
Sbjct: 312 SITSVQAIYVPADDLTDPAPAASFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPAI 371

Query: 366 -SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  ++   +   + R++  +DI  I G     +      V +   I  F  Q     
Sbjct: 372 LGEEHYEVARKVQQTLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFFSQP---F 427

Query: 425 SSEDVFQ 431
           S  ++F 
Sbjct: 428 SVAEIFT 434


>gi|269977542|ref|ZP_06184509.1| ATP synthase F1, alpha subunit [Mobiluncus mulieris 28-1]
 gi|307701305|ref|ZP_07638326.1| ATP synthase F1, alpha subunit [Mobiluncus mulieris FB024-16]
 gi|269934145|gb|EEZ90712.1| ATP synthase F1, alpha subunit [Mobiluncus mulieris 28-1]
 gi|307613466|gb|EFN92714.1| ATP synthase F1, alpha subunit [Mobiluncus mulieris FB024-16]
          Length = 543

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 178/447 (39%), Gaps = 24/447 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L +  E Y  +     + GY++        V  L       + +  Q      LG  +
Sbjct: 13  SALDEFVESYEPSAATAEEVGYVTEAADGIAHVEGL-PGTMANELLRFQDG---TLGLAM 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  +    +G    I  G  V+  G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLDVREIGAIVLGDFTGIEEGQEVYRTGDVLSVPVGDGYLGRVVDPLGNPIDGLGEIKDV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 AGRRALELQAPGVMMRRSVCEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           L+        D     + I   VG++G  +         G  ++ + +V + + ++   +
Sbjct: 189 LNQRDNWKSGDPSKQVRCIYVAVGQKGSTIASVKGALEDGGAMEYTTIVASPASDAAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 249 YLAPYTGSAIGQHWMYEGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDELGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   R +         +D    + + +
Sbjct: 369 AVDVGISVSRVGGDAQVKAMKKVAGTLKITLAQY---RSMAAFAMLASDLDATTRRQLTR 425

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   +    E+    I  
Sbjct: 426 GEKLMELLKQPQGTPYPVEEQICSIWA 452


>gi|225871930|ref|YP_002753384.1| flagellar protein export ATPase FliI [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793979|gb|ACO34069.1| flagellar protein export ATPase FliI [Acidobacterium capsulatum
           ATCC 51196]
          Length = 450

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 164/417 (39%), Positives = 241/417 (57%), Gaps = 11/417 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +  I +V  TV        +G+   +   +   +L + I      +   PV     I 
Sbjct: 33  GKV--IEAVGQTVESAGPLCSVGECCEIVDSEGEVHLAEAIGFRGANLITMPVESSSGIR 90

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            GD V   G +  I       GRV+NALG+P+D   SL   D  + +   VP  ++R  +
Sbjct: 91  YGDTVAALGVQPSIDVGEGLIGRVLNALGQPLDRAGSLRATDA-LPLERAVPHPLDRTPI 149

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
                TGIR ID    +  GQR+G+F GSG+GKSTL+ M  R+   D +++ LVGERGRE
Sbjct: 150 RMPLGTGIRAIDSMLTVGRGQRVGIFGGSGVGKSTLIGMMTRNSDADVIVVGLVGERGRE 209

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V EF+ED LG +  K+SVVVV+TSD++P+LR  A L A T+AEYF+ +G +VLL+LDS+T
Sbjct: 210 VGEFLEDSLGPEGRKRSVVVVSTSDQTPLLRMRAALAATTVAEYFADQGKHVLLVLDSLT 269

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + RE+   +GE P A+GY  SVFS L +L+ER G  +  +G+ITA  +VL++GD+ 
Sbjct: 270 RFAMAAREVGLAAGEPPTAKGYTPSVFSRLAQLVERAG--QFREGSITAFYTVLMEGDDQ 327

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            D + D+VRS LDGH+VL+R+LA +G YPP++ L S+SRL     S + +   +++  ++
Sbjct: 328 QDTLVDAVRSYLDGHVVLSRTLASQGWYPPIELLDSISRLMPSVASGEHRGAAATVRRML 387

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +  + D+  IG Y+ G D  LD A+     +  FL Q   +  S   F E  + L
Sbjct: 388 AAYARSEDLVRIGAYKAGTDPELDDALRTREAVRAFLMQDAGEAVS---FAEAREGL 441


>gi|88860635|ref|ZP_01135272.1| ATP synthase subunit A [Pseudoalteromonas tunicata D2]
 gi|88817230|gb|EAR27048.1| ATP synthase subunit A [Pseudoalteromonas tunicata D2]
          Length = 513

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 182/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I S+T     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISDLIKKRIEQFEVVSEARNEGTIVSVTDGIIRIHGLAD-CMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYADLTEGQKVLSTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   D    +    P  + RQ V++  +TG + ID   P+  GQR  V      GK
Sbjct: 117 GKGALD-NDGFEPVEKIAPGVIERQSVDEPVQTGYKSIDAMIPVGRGQRELVIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +      K +   VG++   +   +           ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKGTGVKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 236 FLAPFAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +   G + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNADYVEKYTNGAVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIVKKLGGGIRLALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVMELMKQKQ 435


>gi|65332618|gb|AAY42233.1| ATP synthase beta subunit [Poga oleosa]
          Length = 480

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLPPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   +GER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGIGERTREENDLSMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKZTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 417


>gi|120600835|ref|YP_965409.1| F0F1 ATP synthase subunit beta [Shewanella sp. W3-18-1]
 gi|146295036|ref|YP_001185460.1| F0F1 ATP synthase subunit beta [Shewanella putrefaciens CN-32]
 gi|166222415|sp|A4YCH8|ATPB_SHEPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222417|sp|A1RQB0|ATPB_SHESW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120560928|gb|ABM26855.1| ATP synthase F1, beta subunit [Shewanella sp. W3-18-1]
 gi|145566726|gb|ABP77661.1| ATP synthase F1, beta subunit [Shewanella putrefaciens CN-32]
 gi|319428554|gb|ADV56628.1| ATP synthase F1, beta subunit [Shewanella putrefaciens 200]
          Length = 463

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ + N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKITGEGACN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID    +G+ +    I    P 
Sbjct: 60  GSSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGPIGEEE-RYVIHRAAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDDD-KTTVFRARKIERFLSQP 406


>gi|51103198|gb|AAT96339.1| HrcN [Pseudomonas viridiflava]
          Length = 451

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 152/440 (34%), Positives = 229/440 (52%), Gaps = 16/440 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGK 54
           M   L  L    +  S+ L     V   G I+ +  +            +GD   + +  
Sbjct: 1   MDAALARLESWRQAQSERLSHCAPVQIRGRIAGVNGILL--NSYMPRARIGDLCEISRAD 58

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
            S+ + +++  +     +  +G  + I++G  V        +       G V++  G+ +
Sbjct: 59  GSEVMAEIVGFDRQHTLLAALGPLDGIAIGASVRPLFQPHSLVVGEFLLGAVLDGFGRSL 118

Query: 114 DGDDS----LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
            GD      L     +  ++   PPA  R R++    TG+R ID    L  GQR+G+FAG
Sbjct: 119 SGDGPSAFALSGAVGAQPVIRDAPPATERPRIDAPLSTGLRSIDGLLTLGEGQRVGIFAG 178

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESP 228
           +G GK+TLL+  AR+   + ++  L+GERGRE+REF+  +   +  +++V+V +TSD S 
Sbjct: 179 AGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRTVLVCSTSDRSS 238

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A  TA  IAE F  +G + LLI+DS+TRFA + REI   SGE     G P SV+S
Sbjct: 239 MERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGEPAGRGGLPPSVYS 298

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRL+ER G        ITA+ SVL++ D+ NDPIAD VRS+LDGHIVL+R LAE G Y
Sbjct: 299 LLPRLVERAGR--THDAAITALYSVLIEQDSMNDPIADEVRSLLDGHIVLSRKLAERGHY 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P VD L S+SR        ++    + +  L+  +++   +  +G Y+PG D + D AV 
Sbjct: 357 PAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQPGNDPLTDFAVQ 416

Query: 409 QVPIIYDFLKQSPSDLSSED 428
               I  FL+QS  D  S D
Sbjct: 417 SRDQIMGFLQQSLRDPVSLD 436


>gi|322694068|gb|EFY85908.1| ATP synthase beta chain precursor [Metarhizium acridum CQMa 102]
          Length = 587

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 194/445 (43%), Gaps = 29/445 (6%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ--VIRIN-- 66
           L   ++ +  V  G I  +      V   +  +      +     +DN GQ  V+ ++  
Sbjct: 105 LNSRFASSASVGVGKIHQVIGAVVDVKFDTAKLP----AILNSLETDNNGQKLVLEVSQH 160

Query: 67  --LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              ++V    +   E +  G      G    I       GR+IN  G PID    + K D
Sbjct: 161 LGENVVRCIAMDGTEGLVRGAKATDTGAPITIPVGPATLGRIINVTGDPIDERGPI-KTD 219

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S+ P   ++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 220 KFLPIHSEPPEFTDQSTSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 279

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 280 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGARARV 339

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 340 ALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 399

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 400 QERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 457

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +     + +  ++  ++  +DI  I G     +      V +   
Sbjct: 458 LDSTSRMLDPRIVGEEHYNTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARK 516

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL Q     +   VF  I  KL
Sbjct: 517 IQRFLSQP---FTVAQVFTGIEGKL 538


>gi|296157535|ref|ZP_06840370.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1]
 gi|295892307|gb|EFG72090.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1]
          Length = 464

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/411 (27%), Positives = 190/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRDHMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G+   +       GR+++ LG+PID    +   D+   I  K P 
Sbjct: 61  GASDGLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIN-SDVVRGIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 YAITRGVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 407


>gi|325068183|ref|ZP_08126856.1| F0F1 ATP synthase subunit alpha [Actinomyces oris K20]
 gi|302148394|dbj|BAJ14079.1| alpha subunit of the F1 ATPase [Actinomyces oris]
          Length = 543

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 91/432 (21%), Positives = 173/432 (40%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L + AE Y    V   + G++         V  L   V   + +  +       G  +
Sbjct: 13  SALNEFAESYKPAEVAAEEVGHVVFAADGIAHVEGL-PGVMANELLTFEDG---TAGLAM 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G +V   G    +     + GRV++ LG+PIDG   + + 
Sbjct: 69  NLEERRIGVVVLGSFDGIDEGQVVRRTGEVLSVPVGDAYLGRVVDPLGRPIDGLGEI-EA 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMARKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIALDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           L+     +  D     + I    G++G  +             + + +V + + +    +
Sbjct: 188 LNQKEAWESGDPNKQVRCIYVATGQKGSTIAAVRATLEERGALEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLSPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCSKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   +       +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQVKAMKKVAGTLKITLAQYRSMQ---AFAMFASDLDAATRAQLTR 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GERLMELLKQPQ 436


>gi|12659353|gb|AAG60211.1| ATPase alpha subunit [Austrobaileya scandens]
          Length = 413

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTKESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|330505658|ref|YP_004382527.1| FliI/YscN family ATPase [Pseudomonas mendocina NK-01]
 gi|328919944|gb|AEB60775.1| FliI/YscN family ATPase [Pseudomonas mendocina NK-01]
          Length = 438

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 154/404 (38%), Positives = 218/404 (53%), Gaps = 6/404 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L    G +  ++ +      L      G    V Q   S    QV+  N DI Y+ P   
Sbjct: 18  LAKVAGRLVRVSGMLL--ESLGCQRSTGQRCRVEQADGSLLDAQVVGFNRDITYLMPFKK 75

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              ++ G  VF       +     W GRV+N LG+P+D    L  G   + +       +
Sbjct: 76  PVGLAAGSRVFPAKDEALLQIDESWLGRVVNGLGEPLDERGKLS-GRDPLPVELPSVNPL 134

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R+ VE     G+R I+    L  GQR+G+FAGSG+GKS LL M  R    D V++ L+G
Sbjct: 135 KRRPVEAALDVGVRAINGLLTLGKGQRVGLFAGSGVGKSVLLGMITRQTKADVVVVGLIG 194

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV+EFI      + L+K+VVVVA ++ESP++R  A     +IA YF  +G +VLL+
Sbjct: 195 ERGREVQEFILHSLGEEGLRKAVVVVAPANESPLMRLKATELCHSIAAYFRDQGQDVLLL 254

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR+A + REIA   GE P  +GYP SVF  LP L+E  G  E   G+++A+ +VL 
Sbjct: 255 VDSLTRYAMAQREIALALGEPPATKGYPPSVFGMLPELVESAGNGESGSGSLSAIYTVLA 314

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+H DPI D  R+ILDGHIVL+R LA+ G YP +D  ASVSR   +            
Sbjct: 315 EGDDHQDPIVDCARAILDGHIVLSRRLADVGHYPAIDISASVSRCMSQVGEPAHLAAGRQ 374

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  +E+ +++  +GGY PG+D   D+AV   P +  FL+Q
Sbjct: 375 FKEFYSTYEKIKELIPLGGYTPGMDAKTDRAVQLAPSLERFLRQ 418


>gi|189017676|gb|ACD71507.1| F1-ATPase alpha subunit [Burmannia congesta]
          Length = 401

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 305 ITDGQICSETELFYRGIRPAINVGLSVSRVGFTAQLRAMKQVRGSSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 362 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 392


>gi|125717634|ref|YP_001034767.1| proton-translocating ATPase, F1 sector, alpha subunit
           [Streptococcus sanguinis SK36]
 gi|125497551|gb|ABN44217.1| Proton-translocating ATPase, F1 sector, alpha subunit, putative
           [Streptococcus sanguinis SK36]
          Length = 454

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 96/389 (24%), Positives = 168/389 (43%), Gaps = 13/389 (3%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGR 104
           G+ ++ +  +    G    +    V I  +G   +I  GD +   G+   +       GR
Sbjct: 3   GELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEALIGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+  GQR 
Sbjct: 60  VVDPLGRPVDGLGDIV-TDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
            +      GK+T+      +        I   +G++   VR  +E          ++VV 
Sbjct: 119 LIIGDRQTGKTTIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVT 178

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P    
Sbjct: 179 ASASQPSPLLFLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREA 238

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I L+
Sbjct: 239 FPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLS 298

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P +D  +SVSR+   A     KK+  +L   +  + E         +   +
Sbjct: 299 DSLFNAGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDL 355

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           D      +++     + LKQ   +    +
Sbjct: 356 DAATQAKLNRGRRTVEVLKQPIHEPLPVE 384


>gi|34539357|gb|AAQ74562.1| F1-ATPase alpha subunit [Luzuriaga radicans]
          Length = 406

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 157/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 7   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 63

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 64  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 122

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 123 LIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 182

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 183 AMEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 243 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 303 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 360 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 390


>gi|120556779|ref|YP_961130.1| F0F1 ATP synthase subunit beta [Marinobacter aquaeolei VT8]
 gi|166201716|sp|A1U7H4|ATPB_MARAV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120326628|gb|ABM20943.1| ATP synthase F1 subcomplex beta subunit [Marinobacter aquaeolei
           VT8]
          Length = 464

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 193/407 (47%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G+I  I      V      V  + D ++ +G  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGHIVQIIGAVIDVEFPRDSVPSVYDALLLEGGETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G    + G+   +       GR+++ LG+PID    +G+ +    I  K P   ++
Sbjct: 60  GLKRGLKAENTGKPISVPVGTQTLGRIMDVLGRPIDEQGDIGEEE-RWAIHRKAPGYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 AASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGQLQERI--TSTKTGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLV 373
           V  D+  DP   +  S LD  +VL+R +A +G YP +DPL S SR  D     +    + 
Sbjct: 297 VPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDPLVIGEQHYNVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQNVLQRYKELKDIIAILGMDELSEDD-KLIVSRARKIERFLSQP 402


>gi|20146626|gb|AAM12467.1| ATP synthase alpha subunit [Ficalhoa laurifolia]
          Length = 388

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 88/385 (22%), Positives = 159/385 (41%), Gaps = 22/385 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 11  GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 68  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 126

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 127 LIIGDRQTGKTAIAIDXILNQKQMNSRSTFESETLYCVYVAIGQKRSTVAQLVQILSEAN 186

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 187 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 246

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 247 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 306

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 307 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VA 363

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYD 415
            +  +   +D      +++   + +
Sbjct: 364 ALAQFGSDLDAATQALLNRGARLTE 388


>gi|226324167|ref|ZP_03799685.1| hypothetical protein COPCOM_01946 [Coprococcus comes ATCC 27758]
 gi|225207716|gb|EEG90070.1| hypothetical protein COPCOM_01946 [Coprococcus comes ATCC 27758]
          Length = 463

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 119/409 (29%), Positives = 194/409 (47%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ +      +     Y+  + D V    K+   L  V+     +  DIV    +G  
Sbjct: 7   GKITQVIGAVLDLKFSEGYLPEINDAVEITRKDGGKL--VVEVAQHLGDDIVRCIAMGPT 64

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G D V   G   +       GR+ N LG+PID  ++    + +  I  K P    
Sbjct: 65  DGLVRGMDAVATGGPISVPVGEATLGRIFNVLGEPIDEKEAPKDVEYA-PIHRKAPSFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   
Sbjct: 124 QATQTEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      +KK+ +V    +E P  R    LT +T+AEYF  KG  +V
Sbjct: 184 VGERTREGNDLYYEMTESGVIKKTAMVFGQMNEPPGARMRVGLTGLTLAEYFRDKGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+R++ E G YP VDPL S SR+ D      +  K
Sbjct: 302 VYVPADDLTDPAPATTFAHLDATTVLSRAITELGIYPAVDPLESTSRILDPHIVGEEHYK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 VARGVQEILQKYKELQDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 409


>gi|51103115|gb|AAT96258.1| HrcN [Pseudomonas viridiflava]
          Length = 451

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 152/440 (34%), Positives = 228/440 (51%), Gaps = 16/440 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGK 54
           M   L  L    +  S+ L     V   G I+ +  +            +GD   + +  
Sbjct: 1   MDAALARLESWRQAQSERLSHCAPVQIRGRIAGVNGILL--NSYMPRARIGDLCEISRAD 58

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
            S+ + +++  +     +  +G    I++G  V        +       G V++  G+ +
Sbjct: 59  GSEVMAEIVGFDRQHTLLAALGPLGGIAIGAPVRPLFQPHSLVVGEFLLGAVLDGFGRSL 118

Query: 114 DGDDS----LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
            GD      L     +  ++   PPA  R R++    TG+R ID    L  GQR+G+FAG
Sbjct: 119 SGDGPSAFALSGAVGAQPVIRDAPPATERPRIDTPLSTGLRSIDGLLTLGEGQRVGIFAG 178

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESP 228
           +G GK+TLL+  AR+   + ++  L+GERGRE+REF+  +   +  +++V+V +TSD S 
Sbjct: 179 AGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRTVLVCSTSDRSS 238

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           + R  A  TA  IAE F  +G + LLI+DS+TRFA + REI   SGE     G P SV+S
Sbjct: 239 MERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGEPAGRGGLPPSVYS 298

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            LPRL+ER G        ITA+ SVL++ D+ NDPIAD VRS+LDGHIVL+R LAE G Y
Sbjct: 299 LLPRLVERAGR--THDAAITALYSVLIEQDSMNDPIADEVRSLLDGHIVLSRKLAERGHY 356

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P VD L S+SR        ++    + +  L+  +++   +  +G Y+PG D + D AV 
Sbjct: 357 PAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQPGNDPLTDFAVQ 416

Query: 409 QVPIIYDFLKQSPSDLSSED 428
               I  FL+QS  D  S D
Sbjct: 417 SRDRIMGFLQQSLRDPVSLD 436


>gi|34500016|gb|AAQ73590.1| ATP synthase beta subunit [Bisgaard Taxon 5]
          Length = 426

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 111/410 (27%), Positives = 186/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+   N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYDALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G+   +       GR++N LG+PID    +G  + +  I    P  
Sbjct: 56  SSDGLKRGLTVTNTGKPISVPVGTKTLGRIMNVLGEPIDERGPIGAEE-NWSIHRAAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VG R RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGXRTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+  R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNNYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|254788504|ref|YP_003075933.1| F0F1 ATP synthase subunit beta [Teredinibacter turnerae T7901]
 gi|259585454|sp|C5BKJ5|ATPB_TERTT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|237687362|gb|ACR14626.1| ATP synthase F1, beta subunit [Teredinibacter turnerae T7901]
          Length = 470

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  + K      Q  ++   IV    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPAVYDALKVESKGLTLEVQ-QQLGDGIVRCIAMGSSE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S    V   G    +       GR+++ LG PID    +G+ +  M I  K P     
Sbjct: 60  GLSRNLEVTGTGAPVSVPVGNETLGRIMDVLGNPIDECGPIGEQE-RMPIHRKAPAYDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TG++VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 SSTTDLLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIALEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYHEMQESGVVNVENFKESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 239 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V +V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  D     
Sbjct: 297 TSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++ R++E +DI  I G     +    + V++   I  FL Q 
Sbjct: 357 AEHYDVARGVQSVLQRYKELKDIIAILGMDELSEED-KQTVNRARKIERFLSQP 409


>gi|260584614|ref|ZP_05852360.1| ATP synthase F1, alpha subunit [Granulicatella elegans ATCC 700633]
 gi|260157637|gb|EEW92707.1| ATP synthase F1, alpha subunit [Granulicatella elegans ATCC 700633]
          Length = 502

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 168/409 (41%), Gaps = 14/409 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           + + G +S I      V  L+  V  G+ V          G    +  + V +   G  E
Sbjct: 25  IEEIGEVSFIGDGIARVIGLT-NVMAGELVEFANG---TYGMAQNLEKNDVGVIIFGTYE 80

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G+ V   GR   +       GRV++ALG+PIDG  +L +      + ++ P  M R
Sbjct: 81  NIHEGESVRRTGRILDVPVGDALIGRVVDALGRPIDGLGAL-ETTKRRPVENEAPGVMQR 139

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVG 196
           + V +   TG++VID   P+  GQR  +      GK+++      +        I   +G
Sbjct: 140 KSVHQSLATGLKVIDALVPIGKGQRELIIGDRKTGKTSIAIDAILNQKGKDTLCIYVAIG 199

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V+  +E          + VV A++ +   +  +AP     + E F   G +VL++
Sbjct: 200 QKESTVKALVETLKRYGAMDYTTVVSASASQPAPMLYIAPYAGTAMGEEFMYNGKDVLIV 259

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + REI+      P    YP  VF    RLLER      E   G++TA+  +
Sbjct: 260 YDDLSKQAAAYREISLLLRRPPGREAYPGDVFYLHSRLLERSAKLNDELGGGSLTALPII 319

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P +    SVSR+   A     KK+ 
Sbjct: 320 ETQAGDISAYIPTNVISITDGQIFLESDLFYSGVRPGLSAGLSVSRVGGSAQIKAMKKVS 379

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            +L   +  + E         +   +D    + +++     + LKQ   
Sbjct: 380 GTLRIDLASYRELE---AFTQFGSDLDAATQQKLNRGKRTVEVLKQDVH 425


>gi|227874657|ref|ZP_03992820.1| F0F1 ATP synthase subunit alpha [Mobiluncus mulieris ATCC 35243]
 gi|306817949|ref|ZP_07451687.1| ATP synthase F1 sector alpha subunit [Mobiluncus mulieris ATCC
           35239]
 gi|227844866|gb|EEJ55012.1| F0F1 ATP synthase subunit alpha [Mobiluncus mulieris ATCC 35243]
 gi|304649292|gb|EFM46579.1| ATP synthase F1 sector alpha subunit [Mobiluncus mulieris ATCC
           35239]
          Length = 545

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 178/447 (39%), Gaps = 24/447 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L +  E Y  +     + GY++        V  L       + +  Q      LG  +
Sbjct: 15  SALDEFVESYEPSAATAEEVGYVTEAADGIAHVEGL-PGTMANELLRFQDG---TLGLAM 70

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  +    +G    I  G  V+  G    +     + GRV++ LG PIDG   +   
Sbjct: 71  NLDVREIGAIVLGDFTGIEEGQEVYRTGDVLSVPVGDGYLGRVVDPLGNPIDGLGEIKDV 130

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 131 AGRRALELQAPGVMMRRSVCEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTI 190

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           L+        D     + I   VG++G  +         G  ++ + +V + + ++   +
Sbjct: 191 LNQRDNWKSGDPSKQVRCIYVAVGQKGSTIASVKGALEDGGAMEYTTIVASPASDAAGFK 250

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 251 YLAPYTGSAIGQHWMYEGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 310

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 311 RLLERCAKLSDELGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 370

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   R +         +D    + + +
Sbjct: 371 AVDVGISVSRVGGDAQVKAMKKVAGTLKITLAQY---RSMAAFAMLASDLDATTRRQLTR 427

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   +    E+    I  
Sbjct: 428 GEKLMELLKQPQGTPYPVEEQICSIWA 454


>gi|34539403|gb|AAQ74585.1| F1-ATPase alpha subunit [Petrosavia stellaris]
          Length = 417

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 89/408 (21%), Positives = 162/408 (39%), Gaps = 23/408 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V   ++ +  G+        S   G  + +  + V I   G    I  GDLV 
Sbjct: 2   VGDGIARVYGXNE-IQAGEMXEFA---SGVKGXALNLENENVGIVVFGSDTVIKEGDLVK 57

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 58  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQT 116

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 117 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 176

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I
Sbjct: 177 QKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +
Sbjct: 237 FDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 297 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 GSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|83591194|ref|YP_431203.1| F0F1 ATP synthase subunit beta [Moorella thermoacetica ATCC 39073]
 gi|118573697|sp|Q2RFX9|ATPB_MOOTA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|83574108|gb|ABC20660.1| ATP synthase F1 subcomplex beta subunit [Moorella thermoacetica
           ATCC 39073]
          Length = 462

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G +  +      V   S  +  L + +  +    +   + ++ +  + V    +   + +
Sbjct: 4   GQVVQVIGPVVDVEFASDRLPDLYNAITIKTDKINITMEAMQHLGNNTVRCVALSSTDGL 63

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+PID    +   +  + I    P    +Q 
Sbjct: 64  QRGMKAVDTGQPITVPVGRATLGRLFNVLGEPIDNQGPVETTE-RLPIHRPAPSFEEQQP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+  ++     + S VGE
Sbjct: 123 STEVLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFSGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R    LT +T+AEYF      +VLL 
Sbjct: 183 RTREGNDLYLEMKESGVLEKTALVFGQMNEPPGARLRVGLTGLTMAEYFRDAEGQDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRVLGEEHYQVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 GVQQVLQRYKELQDIIAILGMDELSEED-KLIVARARKIQRFLSQP 405


>gi|153206110|ref|ZP_01945373.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177']
 gi|165918717|ref|ZP_02218803.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 334]
 gi|81839029|sp|Q83AF5|ATPB_COXBU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081329|sp|A9KBF7|ATPB_COXBN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120577240|gb|EAX33864.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177']
 gi|165917545|gb|EDR36149.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 334]
          Length = 461

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 188/406 (46%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G    I      V      V      +   +N+  L    ++   +V    +G  E 
Sbjct: 4   AKSGTTIEIIGAVVDVEFPRHAVPKVYDALQVDENNLTLEVQQQLGDGVVRTIAMGSTEG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V +  +   +       GR++N LG+PID    +   +  + I    P  + + 
Sbjct: 64  LKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 123 GATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL 
Sbjct: 183 ERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V
Sbjct: 243 IDNIFRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD  +VL+R +AE G YP +DPL S SR  D      +  ++  
Sbjct: 301 PADDLTDPSPATTFAHLDATVVLSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R+EE +DI  I G     +    +AV +   I  FL Q 
Sbjct: 361 GVQETLQRYEELKDIIAILGMDELSEDD-KRAVRRARKIQRFLSQP 405


>gi|284504910|gb|ADB91404.1| ATP synthase alpha subunit [Enterococcus durans]
          Length = 383

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 97/388 (25%), Positives = 157/388 (40%), Gaps = 14/388 (3%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +         L +    G+ +     +    G    +  + V I  +G  E I  GD V 
Sbjct: 3   VGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVK 58

Query: 89  HWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G+   +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +T
Sbjct: 59  RTGKIMEVPVGDALIGRVVNPLGQPIDGLGEI-ATDKARPVEAMAPGVMQRKSVNEPMQT 117

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREF 205
           G++ ID   P+  GQR  V      GK+++      +        I   +G++   VR  
Sbjct: 118 GLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTILNQKGQDMICIYVAIGQKDSTVRTQ 177

Query: 206 IEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +E          ++VV A + +   L  +AP     + E F   G +VL+I D +++ A 
Sbjct: 178 VETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAV 237

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + RE++      P    YP  VF    RLLER      E   G++TA+  V     + + 
Sbjct: 238 AYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISA 297

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            I  +V SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  
Sbjct: 298 YIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLAS 357

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQV 410
           + E         +   +D      +++ 
Sbjct: 358 YRELE---AFTQFGSDLDAATQAKLNRG 382


>gi|186886277|gb|ACC93541.1| ATPase F1 alpha subunit [Juncus sikkimensis]
          Length = 370

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   VG++   V + ++     N 
Sbjct: 120 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANA 179

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 180 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 239

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 240 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 299

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 300 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 356

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 357 FAQFGSDLDAATQ 369


>gi|118917408|dbj|BAF40512.1| ATP synthase beta subunit [Aristogeitonia monophylla]
          Length = 480

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 186/421 (44%), Gaps = 28/421 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           +G  +  I  V   V    +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 3   RGRIVQIIGPVLDVVFSRGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRTV 60

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 61  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +      + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   +
Sbjct: 120 PAFIELDTKLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGV 179

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 180 SVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 239

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 240 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 298 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 357

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 358 LQPNIVGSDHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 416

Query: 420 S 420
            
Sbjct: 417 P 417


>gi|92115399|ref|YP_575327.1| F0F1 ATP synthase subunit beta [Chromohalobacter salexigens DSM
           3043]
 gi|118573521|sp|Q1QSD0|ATPB_CHRSD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91798489|gb|ABE60628.1| ATP synthase F1 subcomplex beta subunit [Chromohalobacter
           salexigens DSM 3043]
          Length = 458

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 120/404 (29%), Positives = 184/404 (45%), Gaps = 10/404 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G I  I      V      V      +        L    ++   +V    +G  E + 
Sbjct: 2   SGRIVQIIGAVIDVEFPRDAVPKVYDALKVSDTETILEVQQQLGDGVVRAIAMGTTEGLK 61

Query: 83  LG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G D+V       +       GR++N LG+PID    +G+ D  M I  K P    +   
Sbjct: 62  RGLDVVNSGSAISVPVGKATLGRIMNVLGEPIDEAGEIGE-DERMPIHRKAPSYAEQAAS 120

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER
Sbjct: 121 NELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGER 180

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F   G +VLL +D
Sbjct: 181 TREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDDGRDVLLFVD 240

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  
Sbjct: 241 NIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPA 298

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSSL 376
           D+  DP   +  S LD  +VL RS+AE G YP +DPL S SR  D     +E       +
Sbjct: 299 DDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDPLTVGEEHYNTARGV 358

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 359 QGVLQRYKELKDIIAILGMDELSDED-KLTVSRARKIQRFLSQP 401


>gi|307253313|ref|ZP_07535185.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307264334|ref|ZP_07545922.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|306859177|gb|EFM91218.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306870286|gb|EFN02042.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 467

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 113/415 (27%), Positives = 193/415 (46%), Gaps = 13/415 (3%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           + ++   V+  G I  I      V      V  + D +  +   +  + Q +     +V 
Sbjct: 3   QQFNGEQVMATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGLVR 60

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +G  + +  G  V + G   ++       GR++N LG+PID    +G+ +   +I  
Sbjct: 61  CIALGTSDGLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGE-EARWDIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +  
Sbjct: 120 AAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHS 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 GYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVV 357

Query: 367 ADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +E   +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 GEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 411


>gi|163800137|ref|ZP_02194038.1| putative flagellum-specific ATP synthase [Vibrio sp. AND4]
 gi|159175580|gb|EDP60374.1| putative flagellum-specific ATP synthase [Vibrio sp. AND4]
          Length = 450

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 151/436 (34%), Positives = 241/436 (55%), Gaps = 7/436 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L+  LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSDALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
             +  + Y+ P+     +  G  V        +  S+ W GRV+N LG+P D    L  G
Sbjct: 70  GFDHTVAYLMPIRRLGGLFAGAKVIPLDSDSTVRLSSQWLGRVVNGLGEPFDDGAPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 D-RVSLEPKPINPLKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREF+  ++  +  +K++++ A +DESP++R  A L    +
Sbjct: 189 QNTEADVIVVGLIGERGREVREFVERNFTPEARRKAIIIAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 249 AEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NPDGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     + ++   L   + + +++  +GGY+PG D  LD++V   P +  +L+QS 
Sbjct: 369 SACTHEAHSTIANNFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRAYLQQSA 428

Query: 422 SDLSSEDVFQEITKKL 437
           S+            ++
Sbjct: 429 SEAVDYPTSLTALAQM 444


>gi|295658821|ref|XP_002789970.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb01]
 gi|226282053|gb|EEH37619.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb01]
          Length = 513

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 189/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  LA  Y+     Q G I  +      V    + +   L       G     L     
Sbjct: 27  ALRSLASRYASTSSGQVGKIHQVIGAVVDVKFDGEQLPSILNALETTNGNQKLVLEVAQH 86

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V   G    I       GR++N  G PID    + K  
Sbjct: 87  LGENVVRTIAMDGTEGLVRGASVTDTGAPIMIPVGPGTLGRIMNVTGDPIDERGPI-KHS 145

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 146 KKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 205

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 206 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 265

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 266 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 325

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 326 QERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 383

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +  ++ + +  ++  ++  +DI  I G     +      V +   
Sbjct: 384 LDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 442

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I  KL
Sbjct: 443 LQRFLSQP---FTVAQVFTGIEGKL 464


>gi|170694320|ref|ZP_02885474.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
 gi|170140743|gb|EDT08917.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M]
          Length = 464

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/411 (27%), Positives = 191/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V       +    + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRTDMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G    +       GR+++ LG+PID    +   D+   I  K P 
Sbjct: 61  GASDGLRRGTVVKNTGHPISVPVGKPTLGRIMDVLGRPIDEAGPIN-SDVVRGIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 YSITRGVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 407


>gi|295100290|emb|CBK97835.1| proton translocating ATP synthase, F1 alpha subunit
           [Faecalibacterium prausnitzii L2-6]
          Length = 584

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 180/426 (42%), Gaps = 15/426 (3%)

Query: 2   QKNLETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +L TL    EDY       +GG + S       V  + + V  G+ V  +       G
Sbjct: 85  KPSLATLKTRIEDYKPAATSEEGGVVISSADGIVEVEGMDRAV-YGEIVTFENGAK---G 140

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            V  +    + I      E + +G +V   G R  I     + GRVI+ LG+PIDG   +
Sbjct: 141 MVESVEPGRLGIMLFDGAETVGVGTMVTRSGKRAGIPVGDGFLGRVIDPLGEPIDGKGPI 200

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
                +  I  + P  + RQ V+    TGI  ID   P+  GQR  +      GK+    
Sbjct: 201 EAVGYN-PIEKQAPGILERQSVDTPLHTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAT 259

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   +    ED         + +V AT+ +S  L+ +AP 
Sbjct: 260 DAILNQKDTGVLCIYVAIGQKASSIARVAEDLKKHGAMSYTTIVAATASDSAPLQYIAPY 319

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF ++G +VL++ D +++ A + R I+      P    YP  VF    RLLER
Sbjct: 320 AGTALAEYFMAQGKSVLIVYDDLSKHAVAYRAISLLLRRSPGREAYPGDVFYLHSRLLER 379

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G+ITA+  V     + +  I  +V SI DG I L  +L   G  P V+  
Sbjct: 380 SCRMSDALGGGSITALPIVETQAGDVSAYIPTNVISITDGQIFLESALFNAGNRPAVNVG 439

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK  ++L   + +++   D+     +   +D      +     + 
Sbjct: 440 LSVSRVGGAAQTKAMKKANANLRIELAQYK---DMESFAQFSSDLDAETRHQLEHGKALT 496

Query: 415 DFLKQS 420
           + LKQ 
Sbjct: 497 EMLKQP 502


>gi|183206566|gb|ACC54481.1| ATP synthase beta subunit [Campanula sarmatica]
          Length = 482

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 5   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 63  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGXVS 181

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G      RE     ++               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVSERTREGNDLYKEMKDSGVINEQKFAETKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|164685654|gb|ABY66773.1| atp1 [Alstroemeria sp. TJB 347]
          Length = 413

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 161/407 (39%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGE 197
           ++ +D    +  G+R  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSXVXIGRGRRELIIGDRQTGKTAIAIDTILNQKQIHSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L  MAP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEANAMEYSILVAATASDPAPLXFMAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|161378124|ref|NP_746480.2| flagellum-specific ATP synthase [Pseudomonas putida KT2440]
          Length = 451

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 158/429 (36%), Positives = 232/429 (54%), Gaps = 15/429 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L T A+  E  ++ +V   G +  +  +      L     +G   +    +S      
Sbjct: 10  KRLGTYAEAIELPAQPIV--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPVQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+      V++ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 66  EAEVMGFAGPKVFLMPVGSIVGIAPGARVVPLDDGGRL--PMGMSMLGRVLDGAGRALDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 KGGM-KAEDWVPMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    + +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G  E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  
Sbjct: 303 ERAGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+  +   AD  +       L  R  ++RD+  +G Y  G D   D A+     + 
Sbjct: 363 ASISRVMPQVVDADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLV 422

Query: 415 DFLKQSPSD 423
           +FL+Q   +
Sbjct: 423 EFLRQGLRE 431


>gi|315604636|ref|ZP_07879699.1| ATP synthase F1 sector alpha subunit [Actinomyces sp. oral taxon
           180 str. F0310]
 gi|315313648|gb|EFU61702.1| ATP synthase F1 sector alpha subunit [Actinomyces sp. oral taxon
           180 str. F0310]
          Length = 545

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 96/445 (21%), Positives = 172/445 (38%), Gaps = 24/445 (5%)

Query: 7   TLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L    E Y    V   + G++         V  L       + +  +      LG  + 
Sbjct: 14  ALDSFMESYRPADVATEEVGHVIETADGIAHVEGL-PGTMANELLRFEDG---TLGLAMN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   +    +G    I  G +V   G    +     + GR ++ LG+PIDG   +   D
Sbjct: 70  LDQREIGAVVLGDFGGIEEGQVVHRTGEVLSVPVGDGYLGRTVDPLGRPIDGLGDITDLD 129

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  M R+ V +   TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 130 GRRALELQAPGVMMRKSVHEPLATGLKAIDSMIPVGRGQRQLIIGDRKTGKTAIALDTIL 189

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +        D     + I   +G++G  +               + +V + + +    + 
Sbjct: 190 NQRENWKSGDPNKQVRCIYVAIGQKGSTIASVRSTLEDAGAMEYTTIVASPASDPAGYKY 249

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           MAP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 250 MAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 309

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 310 LLERCAKLSDALGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 369

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   R +     +   +D    + + + 
Sbjct: 370 VDVGISVSRVGGAAQPKAMKKVAGTLKLTLAQY---RSMAAFAMFASDLDAATRRQLTRG 426

Query: 411 PIIYDFLKQSPS-DLSSEDVFQEIT 434
             + + LKQ  S   + ED    I 
Sbjct: 427 ERLMELLKQPQSTPYAMEDQVASIW 451


>gi|114800518|ref|YP_760593.1| F0F1 ATP synthase subunit beta [Hyphomonas neptunium ATCC 15444]
 gi|123128756|sp|Q0C100|ATPB_HYPNA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114740692|gb|ABI78817.1| ATP synthase F1, beta subunit [Hyphomonas neptunium ATCC 15444]
          Length = 475

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 191/416 (45%), Gaps = 18/416 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V    +   + + +      S  + +V   +  + V    +   E + 
Sbjct: 9   GRISQVIGAVVDVEFDGELPSILNALETFNNGSRLVLEVAQHLGENTVRTIAMDSTEGLV 68

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+PID    +   D  M I ++ P  +++   
Sbjct: 69  RGQPVSDIGTPITVPVGPATLGRIMNVIGEPIDERGPVN-ADTYMPIHAQAPAFVDQATE 127

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 128 SEVLVTGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIMELVNNIAKLFGGYSVFAGVGER 187

Query: 199 GREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            RE  +   + +       +   +  +V    +E P  R    LT +T AEYF      +
Sbjct: 188 TREGNDLYHEMIESNVINLEGESRMSLVYGQMNEPPGARARVALTGLTQAEYFRDVEGKD 247

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V 
Sbjct: 248 VLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQ 305

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+ D      +  
Sbjct: 306 AVYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILDPMVVGEEHY 365

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           ++   +  ++ +++E +DI  I G     +      V +   +  FL Q P D++ 
Sbjct: 366 EVARGVQQILQKYKELQDIIAILGMDELSEDD-KVTVARARKVERFLSQ-PFDVAQ 419


>gi|312794895|ref|YP_004027817.1| ATP synthase beta chain [Burkholderia rhizoxinica HKI 454]
 gi|312166670|emb|CBW73673.1| ATP synthase beta chain (EC 3.6.3.14) [Burkholderia rhizoxinica HKI
           454]
          Length = 463

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 13/412 (3%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICP 74
           S   +V+G  +  I +V        Q   + D ++ +G  SD   +V + +   +V    
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPREQMPKIYDALILEG--SDLTLEVQQQLGDGVVRTIC 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E +  G  V + G    +       GR+++ LG+PID    +   + +  I  K P
Sbjct: 60  LGSSEGLRRGLTVKNTGNPITVPVGTPTLGRIMDVLGRPIDEAGPIS-HENTRSIHQKAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     
Sbjct: 119 AFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYS 178

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G
Sbjct: 179 VFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEG 238

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+
Sbjct: 239 RDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITS 296

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     +E
Sbjct: 297 VQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEE 356

Query: 370 KKLV-SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  S+   + RF+E RDI  I G            V +   I  FL Q 
Sbjct: 357 HYTITRSVQQTLQRFKELRDIIAILGMDELS-PEDKLTVARARKIQRFLSQP 407


>gi|120405284|ref|YP_955113.1| F0F1 ATP synthase subunit alpha [Mycobacterium vanbaalenii PYR-1]
 gi|158513019|sp|A1TD57|ATPA_MYCVP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119958102|gb|ABM15107.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium vanbaalenii
           PYR-1]
          Length = 548

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 96/448 (21%), Positives = 175/448 (39%), Gaps = 28/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGY-----ISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  +   +    EDY  +     G      +         V  L   V   + +   G  
Sbjct: 4   LTISASDIEGAIEDYVSSFTADSGREEIGVVIDAGDGIAHVEGL-PSVMTQELLEFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + ++   V    +G  E+I  G  V   G    +     + GRVIN LG+PID
Sbjct: 62  --VLGVALNLDEHSVGAVILGEFEKIEQGQQVKRTGEVLSVPVGDAFLGRVINPLGQPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +    +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 120 GQGDI-EAEGRRALELQAPSVVQRQGVSEPLQTGIKAIDSMTPIGRGQRQLIIGDRKTGK 178

Query: 175 STLLSMFARSD----------CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVAT 223
           + +      +              + +   +G++G  +             + + +V A 
Sbjct: 179 TAVCVDTILNQREAWATGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMECTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + ++   + +AP T   I +++   G +VL++ D +++ A + R I+      P    +P
Sbjct: 239 ASDAAGFKWLAPYTGSAIGQHWMYDGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG   L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     K++  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQYRELE---AFAAFASDLDA 415

Query: 402 ILDKAVHQVPIIYDFLKQSP-SDLSSED 428
                + +   + + LKQ   +    ED
Sbjct: 416 ASKAQLDRGARLVELLKQPQYTPYPVED 443


>gi|71280422|ref|YP_266830.1| F0F1 ATP synthase subunit beta [Colwellia psychrerythraea 34H]
 gi|118573522|sp|Q48AW0|ATPB_COLP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71146162|gb|AAZ26635.1| ATP synthase F1, beta subunit [Colwellia psychrerythraea 34H]
          Length = 461

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 190/409 (46%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I      V      V        + +G     + +V + +   +V    +G 
Sbjct: 1   MSTGKVVQIIGAVVDVEFPQDAVPQVYDALKITEGDLEGLVLEVQQQLGGGVVRTIAMGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G+  ++       GR++N LG+PID    +G+ D    I  + P   
Sbjct: 61  SDGLRRGLNVVNTGQGIQVPVGVETLGRIMNVLGEPIDEAGPIGEKD-RWSIHREAPAYA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 EQSMSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R     T +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +   KG+IT++ +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTNKGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  D      +  +
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSSSRQLDPLVVGTEHYE 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++ R++E +DI  I G     +    + V +   I  +L Q 
Sbjct: 358 TARGVQTVLQRYKELKDIIAILGMDELSEED-KQTVSRARKIQRYLSQP 405


>gi|145222904|ref|YP_001133582.1| F0F1 ATP synthase subunit alpha [Mycobacterium gilvum PYR-GCK]
 gi|189081304|sp|A4T8K0|ATPA_MYCGI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145215390|gb|ABP44794.1| ATP synthase F1 subcomplex alpha subunit [Mycobacterium gilvum
           PYR-GCK]
          Length = 548

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 178/445 (40%), Gaps = 28/445 (6%)

Query: 4   NLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   +    EDY  +        + G +         V  L   V   + +   G     
Sbjct: 7   SASDIEGAIEDYVSSFTADSEREEIGTVIDAGDGIAHVEGL-PSVMTQELLEFPGG---V 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           LG  + ++   V    +G  E+I  G  V   G    +     + GRVIN LG+PIDG  
Sbjct: 63  LGVALNLDEHSVGAVILGEFEKIEEGQQVKRTGEVLSVPVGDAFLGRVINPLGQPIDGQG 122

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK--- 174
            + + D    +  + P  + RQ V +  +TGI+ ID  TP+  GQR  +      GK   
Sbjct: 123 DI-ESDTRRALELQAPSVVQRQGVSEPLQTGIKAIDSQTPIGRGQRQLIIGDRKTGKTAV 181

Query: 175 --STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDE 226
              T+L+     +  D     + +   +G++G  +               + +V A + +
Sbjct: 182 AVDTILNQRKAWETGDPKQQVRCVYVAIGQKGTTIASVKRALEEGGAMEYTTIVAAPASD 241

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           +   + +AP T   I +++   G +VL++ D +++ A + R I+      P    +P  V
Sbjct: 242 AAGFKWLAPYTGSAIGQHWMYDGKHVLIVFDDLSKQADAYRAISLLLRRPPGREAFPGDV 301

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      E   G++T +  +    ++ +  I  +V SI DG   L   L  
Sbjct: 302 FYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDISAFIPTNVISITDGQCFLESDLFN 361

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           +G  P ++   SVSR+   A     K++  SL   + ++ E         +   +D    
Sbjct: 362 QGVRPAINVGVSVSRVGGAAQIKAMKEVAGSLRLELSQYRELESFAA---FASDLDAASK 418

Query: 405 KAVHQVPIIYDFLKQSP-SDLSSED 428
             + +   + + LKQ   +  S ED
Sbjct: 419 AQLDRGARLVELLKQPQYTPYSVED 443


>gi|153948482|ref|YP_001399626.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|152959977|gb|ABS47438.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           31758]
          Length = 446

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 156/427 (36%), Positives = 226/427 (52%), Gaps = 18/427 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           +L    G +  +T +      +   + +G     +  +   +  QV+  + DI Y+ P  
Sbjct: 18  HLARVAGRLVRVTGLLL--ESVGCRLAIGQRCRIESVDETFIEAQVVGFDRDITYLMPFK 75

Query: 77  IGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               +  G  VF     G   I     W GRVIN LG+PIDG   LG    S  +  ++P
Sbjct: 76  HPGGVLGGARVFPSEQDGELLI--GDSWLGRVINGLGEPIDGKGQLGG---STPLQQQLP 130

Query: 134 --PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS LL M  R    D V+
Sbjct: 131 QIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRYTQADVVV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREV+EFI        + KSVVV A +DESP++R  A     +IA Y+  KG 
Sbjct: 191 VGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATELCHSIATYYRDKGH 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S    G +TA+
Sbjct: 251 DVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSSGN-GTMTAI 309

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +     + 
Sbjct: 310 YTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQSISRCMSQVIGRQQA 369

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           K  S L      +   + +  +GGY  G D + D+AVH  P I  FL+Q   ++    +F
Sbjct: 370 KAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQFLRQ---EVGHPALF 426

Query: 431 QEITKKL 437
               ++L
Sbjct: 427 SASVEQL 433


>gi|113972252|ref|YP_736045.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-4]
 gi|123029180|sp|Q0HD79|ATPB_SHESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113886936|gb|ABI40988.1| ATP synthase F1, beta subunit [Shewanella sp. MR-4]
          Length = 463

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ S N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKIVGEGSCN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID   ++G+ +    I    P 
Sbjct: 60  GTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGEPIDEAGAIGEEE-RYVIHRSAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDDD-KMTVSRARKIERFLSQP 406


>gi|164685664|gb|ABY66778.1| atp1 [Cassytha filiformis]
          Length = 413

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 91/410 (22%), Positives = 168/410 (40%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGISRVYGLNK-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG ++L        +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGGNALSDHK-RTRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESDTLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ ++  L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDAAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +  +  +   +D +     ++   + +  KQ   + 
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTEVPKQPQYEP 402


>gi|226952192|ref|ZP_03822656.1| F0F1 ATP synthase subunit alpha [Acinetobacter sp. ATCC 27244]
 gi|294648869|ref|ZP_06726325.1| ATP synthase F1 alpha subunit [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837030|gb|EEH69413.1| F0F1 ATP synthase subunit alpha [Acinetobacter sp. ATCC 27244]
 gi|292825260|gb|EFF84007.1| ATP synthase F1 alpha subunit [Acinetobacter haemolyticus ATCC
           19194]
          Length = 514

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 178/447 (39%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 60  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPID-AKLTDAVEKVAPGVIWRQSVDEPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 178 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSADYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQYAPYS 441


>gi|91785733|ref|YP_560939.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400]
 gi|118573517|sp|Q13SQ2|ATPB2_BURXL RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|91689687|gb|ABE32887.1| ATP synthase F1 subcomplex beta subunit [Burkholderia xenovorans
           LB400]
          Length = 464

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 114/411 (27%), Positives = 190/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRDHMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G+   +       GR+++ LG+PID    +   D+   I  K P 
Sbjct: 61  GASDGLRRGTTVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIN-SDVVRGIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 YSITRGVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 407


>gi|51597645|ref|YP_071836.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|186896779|ref|YP_001873891.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis PB1/+]
 gi|51590927|emb|CAH22583.1| Putative flagellum export-specific ATPase [Yersinia
           pseudotuberculosis IP 32953]
 gi|186699805|gb|ACC90434.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis PB1/+]
          Length = 446

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 156/427 (36%), Positives = 227/427 (53%), Gaps = 18/427 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           +L    G +  +T +      +   + +G     +  +   +  QV+  + DI Y+ P  
Sbjct: 18  HLARVAGRLVRVTGLLL--ESVGCRLAIGQRCRIESVDETFIEAQVVGFDRDITYLMPFK 75

Query: 77  IGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               +  G  VF     G   I     W GRVIN LG+PIDG   LG    S  +  ++P
Sbjct: 76  HPGGVLGGARVFPSEQDGELLI--GDSWLGRVINGLGEPIDGKGQLGG---STPLQQQLP 130

Query: 134 --PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS LL M  R    D V+
Sbjct: 131 QIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRYTQADVVV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREV+EFI        + KSVVV A +DESP++R  A     +IA Y+  KG 
Sbjct: 191 VGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATELCHSIATYYRDKGH 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S    G +TA+
Sbjct: 251 DVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSSGN-GTMTAI 309

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +   + + 
Sbjct: 310 YTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQSISRCMSQVIGSQQA 369

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           K  S L      +   + +  +GGY  G D + D+AVH  P I  FL+Q   ++    +F
Sbjct: 370 KAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQFLRQ---EVGHPALF 426

Query: 431 QEITKKL 437
               ++L
Sbjct: 427 SASVEQL 433


>gi|284504904|gb|ADB91401.1| ATP synthase alpha subunit [Lactobacillus plantarum]
          Length = 383

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 98/388 (25%), Positives = 158/388 (40%), Gaps = 14/388 (3%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           I         L      G+ +          G V  +  + V I  +G  + I  GD V 
Sbjct: 3   IGDGIARAHGL-DNALQGELLEFSNG---VYGIVQNLESNDVGIVVLGDFDGIREGDTVK 58

Query: 89  HWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             GR   +       GRV+N LG+P+DG   + K   +  I  K P  M RQ V +  +T
Sbjct: 59  RTGRIMEVPVGDAMIGRVVNPLGQPVDGLGEI-KTTNTRPIEHKAPGIMQRQSVSEPLQT 117

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREF 205
           GI+ ID   P+  GQR  +      GK+   + ++  + D     +   +G++   VR  
Sbjct: 118 GIKAIDALVPIGRGQRELIIGDRKTGKTSVAIDAILNQKDQDMICVYVAIGQKDSTVRAQ 177

Query: 206 IEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +E       +  ++VV A   E   L  +AP     + E F   G +VL++ D +++ A 
Sbjct: 178 VETLKKLGAMDYTIVVTAGPAEPAPLLYLAPYAGAAMGEEFMMNGKHVLIVYDDLSKQAT 237

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + RE++      P    YP  VF    RLLER      E   G++TA+  +     + + 
Sbjct: 238 AYRELSLILRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPIIETQAGDISA 297

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            I  +V SI DG I L+      G  P +D  ASVSR+   A     K +  +L   +  
Sbjct: 298 YIPTNVISITDGQIFLDSDSFYSGVRPAIDAGASVSRVGGDAQIKAMKSVAGTLRLDLAS 357

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQV 410
           + E         +   +D      +++ 
Sbjct: 358 YRELE---SFSQFGSDLDAATQAKLNRG 382


>gi|260892012|ref|YP_003238109.1| ATP synthase F1, beta subunit [Ammonifex degensii KC4]
 gi|260864153|gb|ACX51259.1| ATP synthase F1, beta subunit [Ammonifex degensii KC4]
          Length = 475

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   + +  G  V   G    +       GR+++ LG PIDG   + K +
Sbjct: 56  LGNNVVRTVAMSSTDGLKRGTKVIDTGAPISVPVGRPVLGRLLDVLGNPIDGKGPI-KAE 114

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    PP + +    +  +TG++VID+  P   G +IG+F G+G+GK+ ++     
Sbjct: 115 KYYPIHRPAPPLVEQSTKVEQLETGLKVIDLLVPFMKGGKIGMFGGAGVGKTVIVMELIN 174

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  E   +     +  K+++V    +E P  R    LTA+
Sbjct: 175 NIAKQHGGISVFAGVGERTREGNELYLEMTEAGVLDKTMMVFGQMNEPPGCRLRVGLTAL 234

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +AEYF  +   +VLL +D+I RFA +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 235 CLAEYFRDEEGADVLLFIDNIFRFAQAGTEVSALLGRMPSAVGYQPTLATEMGQLQERI- 293

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG+IT+V ++ V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S S
Sbjct: 294 -TSTVKGSITSVQAIYVPADDLTDPAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTS 352

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   +  ++ R++E +DI  I G     +      V +   +  FL
Sbjct: 353 RILDPKVVGVEHYQVARGVQKVLQRYKELQDIIAILGMEELSEED-KLIVARARKLQKFL 411

Query: 418 KQS 420
            Q 
Sbjct: 412 SQP 414


>gi|320532883|ref|ZP_08033653.1| ATP synthase F1, alpha subunit [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134895|gb|EFW27073.1| ATP synthase F1, alpha subunit [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 543

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/432 (21%), Positives = 172/432 (39%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L + AE Y    V   + G++         V  L   V   + +  +       G  +
Sbjct: 13  SALNEFAESYKPAEVAAEEVGHVVFAADGIAHVEGL-PGVMANELLTFEDG---TAGLAM 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G +V   G    +     + GRV++ LG+PIDG   +   
Sbjct: 69  NLEERRIGVVVLGSFDGIDEGQVVRRTGEVLSVPVGDAYLGRVVDPLGRPIDGLGEID-A 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 128 ESRRALELQAPGVMARKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIALDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           L+     +  D     + I    G++G  +             + + +V + + +    +
Sbjct: 188 LNQKDAWESGDPSKQVRCIYVATGQKGSTIAAVRATLEERGALEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLSPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCSKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   +       +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQVKAMKKVAGTLKITLAQYRSMQ---AFAMFASDLDAATRAQLTR 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GERLMELLKQPQ 436


>gi|237814345|ref|YP_002898796.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346]
 gi|254184023|ref|ZP_04890614.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
 gi|184214555|gb|EDU11598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655]
 gi|237504492|gb|ACQ96810.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346]
          Length = 463

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++ +G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRESMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G    +       GR+++ LG+PID    + + +    I  K P 
Sbjct: 61  GASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESENKRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|149189869|ref|ZP_01868149.1| putative flagellum-specific ATP synthase [Vibrio shilonii AK1]
 gi|148836355|gb|EDL53312.1| putative flagellum-specific ATP synthase [Vibrio shilonii AK1]
          Length = 448

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 153/425 (36%), Positives = 241/425 (56%), Gaps = 7/425 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G +  +  +      +     L    + +    D +  QV+  + +I Y+ PV 
Sbjct: 24  PVARVTGRLVKVNGLMLQ--AVGCRFKLEQRCLVETDEGDMIEAQVVGFDHNIAYLMPVR 81

Query: 77  IGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G  V    G   ++  + W GRV+N LG+ +D D ++ KG   + +  K    
Sbjct: 82  QLGGLFAGAKVIPLDGDSSVNLGSHWLGRVVNGLGEALD-DGAVLKGGDRVSLEPKPINP 140

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  ++   D +++ L+
Sbjct: 141 LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMITQNTEADVIVVGLI 200

Query: 196 GERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREFI  +   +  KK++++ A +DESP++R  A L    +AEYF  KG++VLL
Sbjct: 201 GERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATLLCHRVAEYFRDKGNDVLL 260

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G SE   G++TA+ +VL
Sbjct: 261 LMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLERAGNSEHPDGSLTAIYTVL 320

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DP+ DS R+ILDGH+VL+RSLAE+G YP +D  AS+SR            L +
Sbjct: 321 AEGDDQQDPVVDSARAILDGHVVLSRSLAEQGHYPAIDINASISRCMSGCTPEAHSTLAN 380

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433
               L   + + +++  +GGY+PG D  LD++V   P +  +L Q+ +D +  +    E+
Sbjct: 381 QFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVAMHPQLKKYLLQAANDAVDFQTSLTEL 440

Query: 434 TKKLQ 438
            +  Q
Sbjct: 441 AQLFQ 445


>gi|14718038|gb|AAK72760.1| ATP synthase beta subunit [Durio zibethinus]
          Length = 478

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I ++ ++        V    
Sbjct: 9   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVSCEVQQLLGNXRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDEVSEED-RLTVARARKIERFLSQP 422


>gi|240112071|ref|ZP_04726561.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
 gi|254492881|ref|ZP_05106052.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268598130|ref|ZP_06132297.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
 gi|226511921|gb|EEH61266.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291]
 gi|268582261|gb|EEZ46937.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11]
          Length = 465

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVSDTGSPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + S V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D     AV +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLAVMRARKIQRFLSQP 408


>gi|4995097|emb|CAB44016.1| H(+)-transporting ATP synthase [Durio zibethinus]
          Length = 483

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I ++ ++        V    
Sbjct: 9   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVSCEVQQLLGNXRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDEVSEED-RLTVARARKIERFLSQP 422


>gi|186886239|gb|ACC93522.1| ATPase F1 alpha subunit [Luzula rufa]
          Length = 368

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 355 FAQFGSDLDDATQ 367


>gi|20807130|ref|NP_622301.1| F0F1 ATP synthase subunit beta [Thermoanaerobacter tengcongensis
           MB4]
 gi|81848163|sp|Q8RC15|ATPB_THETN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|20515625|gb|AAM23905.1| F0F1-type ATP synthase beta subunit [Thermoanaerobacter
           tengcongensis MB4]
          Length = 461

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 114/405 (28%), Positives = 187/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           GYI+ +      +        + + +     + + + +V +   D  V    +   + + 
Sbjct: 4   GYITQVIGPVVDIRFEGDLPPINNAIKIPMGDRELVVEVAQHIGDNTVRCVAMASTDGLR 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR+ N LG+PID    +      M I  K P    +   
Sbjct: 64  RGMECIDTGGPIMVPVGKGVLGRMFNVLGQPIDELGEVKDVKY-MPIHKKPPSFEEQNPA 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+    R+   +     I + VGER
Sbjct: 123 TEILETGIKVIDLLTPYPKGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFAGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256
            RE  E   +      + K+  V    +E P  R    L  +TIAEYF  +   +VLL +
Sbjct: 183 SREGNELWLEMHEAGVIDKTAFVFGQMNEPPGARMRVGLAGLTIAEYFRDEEHQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V 
Sbjct: 243 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +      +   +   
Sbjct: 301 ADDLTDPAPATTFAHLDATTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 VQEILQRYKELQDIIAILGMEELTEED-RLIVYRARKIQRFLSQP 404


>gi|88855324|ref|ZP_01129988.1| ATP synthase subunit A [marine actinobacterium PHSC20C1]
 gi|88815231|gb|EAR25089.1| ATP synthase subunit A [marine actinobacterium PHSC20C1]
          Length = 545

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 171/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y   K    + G +         V  L   V   + +         LG   
Sbjct: 13  DALKDFVKAYEPGKAATTETGTVVDAADGIAHVDGL-PGVMANELIRFADG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++ D + +  +G    I  G  V   G          + GRV++ LG PIDG   + K 
Sbjct: 69  NLDEDEIGVVILGEFAGIVEGMEVTRTGEVLSAPVGDAFLGRVVDPLGAPIDGLGEI-KA 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMDRKSVHEPMQTGIKAIDAMIPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D+      I   +G++G  +               + +V A + +    +
Sbjct: 188 INQKENWESGDETKQVRCIYVAIGQKGSTIAAVKGALEEAGAMEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYGGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++    I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVAAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGDAQVKSIKKVSGTLKLELAQYRSLE---AFAMFASDLDPTSRRQLAR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + L+Q   S    E+    I  
Sbjct: 425 GARLTELLRQPQYSPFPVENQVVSIWA 451


>gi|224372373|ref|YP_002606745.1| F0F1 ATP synthase subunit beta [Nautilia profundicola AmH]
 gi|254808159|sp|B9L7Y7|ATPB_NAUPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|223588441|gb|ACM92177.1| ATP synthase F1, beta subunit [Nautilia profundicola AmH]
          Length = 468

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 107/409 (26%), Positives = 190/409 (46%), Gaps = 15/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI-----RINLDIVYICPVGIG 78
           G +  I      V        + + +  + +      +V+     +I   IV    + + 
Sbjct: 3   GKVLQILGPVVDVEFEGDIPAINEALYVEFEAEGEKKKVVLEVAAQIGDHIVRTIAMDLT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + ++ G+ V   G   ++       GR+ N  G  IDG + +        I    PP   
Sbjct: 63  DGLTRGEKVVATGAPIKVPVGEAVLGRIFNVTGDVIDGGEEVPADTPRWSIHRDAPPFEE 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISL 194
           +    + F+TGI+V+D+  P   G + G+F G+G+GK+ ++     +  +      + + 
Sbjct: 123 QSTKMEVFETGIKVVDLLCPYMKGGKTGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAG 182

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R    +T +T+AEYF  +   +V
Sbjct: 183 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGCRNRVAMTGLTMAEYFRDEEGRDV 242

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RFA +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ +
Sbjct: 243 LMFIDNIFRFAQAGAEMSALLGRIPSAVGYQPTLATEMGKLQERI--TSTKKGSITSIQA 300

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      +  +
Sbjct: 301 VYVPADDLTDPAPASVFAHLDSTTVLNRKIAEKGIYPAVDPLDSTSRILDPQIVGEEHYR 360

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 361 VARGVQEVLQKYKDLQDIIAILGMDELSEED-KLTVARARKIEKFLSQP 408


>gi|215487141|ref|YP_002329572.1| flagellum-specific ATP synthase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215265213|emb|CAS09603.1| flagellum-specific ATP synthase FliI [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 457

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLESYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|126667608|ref|ZP_01738577.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
 gi|126627877|gb|EAZ98505.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17]
          Length = 464

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 192/407 (47%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G+I  I      V      V  + D ++ +G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGHIVQIIGAVIDVEFPRDAVPGIYDALLLEGGETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G    +  +   +       GR+++ LG+PID    +G+ +L   I  K P   ++
Sbjct: 60  GLKRGLKAENTHKPISVPVGTKTLGRIMDVLGRPIDEQGPIGEEEL-WAIHRKAPGYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 AASADLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F  +G +VL 
Sbjct: 179 GERTREGNDFYYEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLF 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQERI--TSTKSGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLV 373
           V  D+  DP   +  S LD  +VL+R +A +G YP +DPL S SR  D     +    + 
Sbjct: 297 VPADDLTDPSPATTFSHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDPLVIGEQHYAVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQNVLQRYKELKDIIAILGMDELSEDD-KQIVSRARKIERFLSQP 402


>gi|240117019|ref|ZP_04731081.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
 gi|268602705|ref|ZP_06136872.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
 gi|268586836|gb|EEZ51512.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1]
          Length = 465

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVSDTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + S V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFSGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D     AV +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLAVMRARKIQRFLSQP 408


>gi|170022963|ref|YP_001719468.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis YPIII]
 gi|169749497|gb|ACA67015.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII]
          Length = 446

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 156/427 (36%), Positives = 226/427 (52%), Gaps = 18/427 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           +L    G +  +T +      +   + +G     +  +   +  QV+  + DI Y+ P  
Sbjct: 18  HLARVAGRLVRVTGLLL--ESVGCRLAIGQRCRIESVDETFIEAQVVGFDRDITYLMPFK 75

Query: 77  IGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               +  G  VF     G   I     W GRVIN LG+PIDG   LG    S  +  ++P
Sbjct: 76  HPGGVLGGARVFPSEQDGELLI--GDSWLGRVINGLGEPIDGKGQLGG---STPLQQQLP 130

Query: 134 --PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS LL M  R    D V+
Sbjct: 131 QIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRYTQADVVV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREV+EFI        + KSVVV A +DESP++R  A      IA Y+  KG 
Sbjct: 191 VGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATELCHAIATYYRDKGH 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S    G +TA+
Sbjct: 251 DVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSSGN-GTMTAI 309

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +   + + 
Sbjct: 310 YTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQSISRCMSQVIGSQQA 369

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           K  S L      +   + +  +GGY  G D + D+AVH  P I  FL+Q   ++    +F
Sbjct: 370 KAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQFLRQ---EVGHPALF 426

Query: 431 QEITKKL 437
               ++L
Sbjct: 427 SASVEQL 433


>gi|120613028|ref|YP_972706.1| flagellar protein export ATPase FliI [Acidovorax citrulli AAC00-1]
 gi|120591492|gb|ABM34932.1| flagellar protein export ATPase FliI [Acidovorax citrulli AAC00-1]
          Length = 474

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 153/438 (34%), Positives = 233/438 (53%), Gaps = 25/438 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEE 80
             G ++ +T +      +   V +G   + Q    +  L +V+  + D  ++ P G    
Sbjct: 36  TRGTLTRLTGLVLEAAGI--RVPVGSQCLVQMPGHEAVLAEVVGFSGDRAFLMPAGDIHG 93

Query: 81  ISLGDLVFHW-------------------GRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           +S G  V                      G  R+       GRV+++ G P+D    +  
Sbjct: 94  LSSGASVVPAAPYVPVPRLCDSTRPSTAAGILRLPVGDGLLGRVVDSQGLPLDHGGPVQD 153

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              S  +  +   AM+R  V +   TG+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 154 VS-SEPMDRRQINAMDRDPVRQMLDTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLGMM 212

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVT 240
           AR    D +++ L+GERGREV+EF+ED LG+  ++  VVVA   ++P L +M     A  
Sbjct: 213 ARYTQADVIVVGLIGERGREVKEFVEDILGEQDRERAVVVAAPADAPPLLRMQGAAYATA 272

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G  
Sbjct: 273 IAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSGNG 332

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G +P +D   S SR+
Sbjct: 333 LHGVGSITAFYTVLSEGDDQQDPIADSARAILDGHIVLSRALAETGHFPAIDIEQSASRV 392

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +   L      +  R++++RD+  +G Y  G D  LD+A+   P +  FL+Q+
Sbjct: 393 MHNVASREHFDLARRFRAVYSRYQKSRDLIQVGAYMSGSDPALDEAIRLQPAMAAFLQQN 452

Query: 421 PSDLSS-EDVFQEITKKL 437
             + +  +D    +   L
Sbjct: 453 MFEAAPMQDSLHAMAAVL 470


>gi|90415392|ref|ZP_01223326.1| ATP synthase subunit A [marine gamma proteobacterium HTCC2207]
 gi|90332715|gb|EAS47885.1| ATP synthase subunit A [marine gamma proteobacterium HTCC2207]
          Length = 514

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 100/447 (22%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    NL V       G I S++     +  L   V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKSRIDNLNVSSEAQNEGTIVSVSDGIIRIHGLDD-VMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVVLGDYQSLAEGQKARCTGRVLEVPVGPELEGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++  I    P  + RQ V++  + G++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGPVNAA-ITDAIEKVAPGVIERQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +      +      K I   VG++   V   +         + ++VV AT+ +   ++ 
Sbjct: 178 AIAVDAIINQKGSGIKCIYVAVGQKAASVAAVVRKLEEHGAMEHTIVVAATASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    ++ EY+  +G + L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCSMGEYYRDRGQDALVIYDDLTKQAWAYRQISLLLKRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEKFTNGDVKGQTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   +
Sbjct: 358 ADMFNAGVRPAMNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DDATKAQLDHGERVTELMKQKQYSPQS 441


>gi|6687627|emb|CAB65030.1| ATP synthase beta subunit [Gustavia superba]
          Length = 498

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPISVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|147843974|emb|CAN81591.1| hypothetical protein VITISV_004549 [Vitis vinifera]
          Length = 487

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 182/409 (44%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
           + G  G   RE  + Y+        +V    +E P  R    LTA+T+AEYF      +V
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGXALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDV 257

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +
Sbjct: 258 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQA 315

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        +  +
Sbjct: 316 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYE 375

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 TAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|152995985|ref|YP_001340820.1| F0F1 ATP synthase subunit alpha [Marinomonas sp. MWYL1]
 gi|190358144|sp|A6VWQ6|ATPA1_MARMS RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|150836909|gb|ABR70885.1| ATP synthase F1, alpha subunit [Marinomonas sp. MWYL1]
          Length = 510

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 120/429 (27%), Positives = 185/429 (43%), Gaps = 15/429 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
              L Q  E +   L   + G I+S+ +    V+ L   V   + ++  G   D  G   
Sbjct: 9   FADLKQARESFEPALSPREIGKITSVATGIAKVSGL-PNVGYDELLLFPG---DIYGIAF 64

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++ D + +  +G    +  GD V   G    +       GR+IN +GKP+DG  +LG  
Sbjct: 65  NVDEDEIGVVLLGEYWHLQAGDEVERLGHVVDVPVGDSLIGRIINPIGKPLDGKGNLGTT 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + I    P  M+R  V    +TGI+VID   P+  GQR  +      GK+ +     
Sbjct: 125 E-RLPIERPSPAIMDRAGVSVPLQTGIKVIDALIPVGRGQRELILGDRQTGKTAIAMDTI 183

Query: 183 RSDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +     V  +   +G+R   V + I           +VVVV   +E P L  +AP  A 
Sbjct: 184 LNQRGKNVLCVYCAIGQRASGVAKVIATLREQGAMEYTVVVVTEGNEPPGLAYVAPYAAT 243

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAEYF  +G +VL++ D +T  A + RE++      P    +P  +F    RLLER   
Sbjct: 244 SIAEYFMEQGRDVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERATH 303

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             KE   G++TA+  +  +  + +  I  ++ SI DG I L+ +L E G  P VD   SV
Sbjct: 304 LSKELGGGSLTALPIIETEAQDISAYIPTNLISITDGQIYLSPALFELGILPAVDVGKSV 363

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  KA  A  + +   L     +FEE       G     +D    K +     I   L
Sbjct: 364 SRVGGKAQRAAYRGVTVDLKLAYAQFEELETFARFG---ARLDDDTLKIIEHGRRIRACL 420

Query: 418 KQSPSDLSS 426
           KQ      S
Sbjct: 421 KQPEFAPVS 429


>gi|121603172|ref|YP_980501.1| F0F1 ATP synthase subunit beta [Polaromonas naphthalenivorans CJ2]
 gi|190358212|sp|A1VIV2|ATPB1_POLNA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|120592141|gb|ABM35580.1| ATP synthase F1 subcomplex beta subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 474

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 116/423 (27%), Positives = 195/423 (46%), Gaps = 18/423 (4%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           +A++   +  +QG  +  I +V       +Q   + D +  +G +     Q  ++   IV
Sbjct: 1   MAQETLVDTSIQGKIVQCIGAVVDVEFARNQMPKIYDALKMEGSSLTLEVQ-QQLGDGIV 59

Query: 71  YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +G  + +  G++V++ G    +       GR+++ LG PID    + +  L+  I 
Sbjct: 60  RTIALGTSDGLRRGNIVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQT-LTAPIH 118

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
            K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +     
Sbjct: 119 RKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 178

Query: 190 V---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTA 238
               + + VGER RE  +F  +               K  +V    +E P  R    LT 
Sbjct: 179 SGLSVFAGVGERTREGNDFYHEMADSGVVNLDKLEDSKVAMVYGQMNEPPGNRLRVALTG 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI 
Sbjct: 239 LTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI- 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S S
Sbjct: 298 -TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTS 356

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R    A    D      ++   + R++E RDI  I G    +      AV +   I  FL
Sbjct: 357 RQLSPAVVGEDHYNTARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFL 415

Query: 418 KQS 420
            Q 
Sbjct: 416 SQP 418


>gi|332289264|ref|YP_004420116.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179]
 gi|330432160|gb|AEC17219.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179]
          Length = 457

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 186/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V++  N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYEALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+PID    +G+      I    P  
Sbjct: 56  SSDGLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQANSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|53721003|ref|YP_109989.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei K96243]
 gi|53724016|ref|YP_104462.1| F0F1 ATP synthase subunit beta [Burkholderia mallei ATCC 23344]
 gi|76809634|ref|YP_331595.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1710b]
 gi|83718763|ref|YP_443800.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264]
 gi|121599585|ref|YP_994634.1| F0F1 ATP synthase subunit beta [Burkholderia mallei SAVP1]
 gi|126439925|ref|YP_001060961.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 668]
 gi|126448967|ref|YP_001082535.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10247]
 gi|126455115|ref|YP_001068261.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1106a]
 gi|134281409|ref|ZP_01768117.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
 gi|217424098|ref|ZP_03455598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
 gi|226193310|ref|ZP_03788920.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
           9]
 gi|238561567|ref|ZP_00441840.2| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
 gi|242317222|ref|ZP_04816238.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
 gi|251767098|ref|ZP_04819956.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20]
 gi|254174689|ref|ZP_04881350.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
 gi|254186488|ref|ZP_04893005.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|254194697|ref|ZP_04901128.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
 gi|254261967|ref|ZP_04953021.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
 gi|254298703|ref|ZP_04966154.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
 gi|81823891|sp|Q62FR5|ATPB1_BURMA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|81824616|sp|Q63PI0|ATPB1_BURPS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|118573514|sp|Q3JXV8|ATPB1_BURP1 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|118573516|sp|Q2STE9|ATPB1_BURTA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358205|sp|A3MQJ9|ATPB1_BURM7 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358206|sp|A1V8T1|ATPB1_BURMS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358207|sp|A3P0Z0|ATPB1_BURP0 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358208|sp|A3NF40|ATPB1_BURP6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|52211417|emb|CAH37408.1| ATP synthase beta chain [Burkholderia pseudomallei K96243]
 gi|52427439|gb|AAU48032.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 23344]
 gi|76579087|gb|ABA48562.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710b]
 gi|83652588|gb|ABC36651.1| ATP synthase F1, beta subunit [Burkholderia thailandensis E264]
 gi|121228395|gb|ABM50913.1| ATP synthase F1, beta subunit [Burkholderia mallei SAVP1]
 gi|126219418|gb|ABN82924.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 668]
 gi|126228757|gb|ABN92297.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106a]
 gi|126241837|gb|ABO04930.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10247]
 gi|134247076|gb|EBA47162.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305]
 gi|157808477|gb|EDO85647.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e]
 gi|157934173|gb|EDO89843.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur
           52237]
 gi|160695734|gb|EDP85704.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399]
 gi|169651447|gb|EDS84140.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13]
 gi|217393161|gb|EEC33183.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576]
 gi|225934910|gb|EEH30887.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan
           9]
 gi|238524340|gb|EEP87773.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4]
 gi|242140461|gb|EES26863.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b]
 gi|243063944|gb|EES46130.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20]
 gi|254220656|gb|EET10040.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a]
          Length = 464

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++ +G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRESMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G    +       GR+++ LG+PID    + + +    I  K P 
Sbjct: 61  GASDGLRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESENKRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|313199631|ref|YP_004021247.1| ATP synthase CF1 beta subunit [Isoetes flaccida]
 gi|291575360|gb|ADE18073.1| ATP synthase CF1 beta subunit [Isoetes flaccida]
          Length = 493

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 117/441 (26%), Positives = 193/441 (43%), Gaps = 30/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           M+KN      LA   S  +    G+I+ I   V   V    +   + +  + +G+N    
Sbjct: 1   MKKNP-----LALGVSALVDRNVGHITQIIGPVLDVVFPPGKMPNIYNPSIVKGRNPAGQ 55

Query: 57  --DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKP 112
                 +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG+P
Sbjct: 56  EISVTCEVQQLLGNNKVRTVAMSATDGLTRGMEVIDTGAPLSVPVGEATLGRIFNVLGEP 115

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +D   S+     +  I    P           F+TGI+V+D+  P   G +IG+F G+G+
Sbjct: 116 VDNSGSVDAS-TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGV 174

Query: 173 GKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVV 221
           GK+ L+     +         + + VGER RE  +   +               K  +V 
Sbjct: 175 GKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVINEQNISESKVALVY 234

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A 
Sbjct: 235 GQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAV 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R
Sbjct: 295 GYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSR 352

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            LA +G YP VDPL S S +       +   +    +   + R++E +DI  I G     
Sbjct: 353 GLAAKGIYPAVDPLDSTSTMLQPWIVGEQHYETAQGVKQTLQRYKELQDIIAILGLDELS 412

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 413 EED-RLTVARARKIERFLSQP 432


>gi|193237707|dbj|BAG50117.1| ATP synthase beta subunit [Takakia lepidozioides]
 gi|193237729|dbj|BAG50133.1| ATP synthase beta subunit [Takakia lepidozioides]
          Length = 492

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 186/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S  +    G I+ I      VT    +   + + ++ +G+N+   GQ I +  ++     
Sbjct: 11  STLVAENVGRITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQGINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +  G  V   G    +       GR+ N LG+P+D    +     +
Sbjct: 69  NNKVRAVAMSATDGLMRGMKVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVD-VSTT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|332105883|gb|AEE01404.1| ATP synthase beta chain [Schoutenia ovata]
          Length = 493

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|238787473|ref|ZP_04631271.1| secretion system apparatus ATP synthase ssaN [Yersinia
           frederiksenii ATCC 33641]
 gi|238724260|gb|EEQ15902.1| secretion system apparatus ATP synthase ssaN [Yersinia
           frederiksenii ATCC 33641]
          Length = 406

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 155/381 (40%), Positives = 214/381 (56%), Gaps = 8/381 (2%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
             + LG+         D L +V+ I      + P      +  G  V   G   RI    
Sbjct: 2   PGIALGELCRITSA--DMLAEVVAIEQQTALLSPFASSAGLRCGQWVSPLGHAHRIRVGP 59

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ LG PID    L       E+ S  P  + RQ V++   TGIR ID      
Sbjct: 60  DLVGRVLDGLGVPIDDGPPLSG--YWRELDSSPPDPLTRQPVQQILTTGIRAIDGLLSCG 117

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218
            GQRIG+FA +G+GKS+LLSM       D  +++L+GERGREVREF+E  L      ++V
Sbjct: 118 EGQRIGIFAAAGVGKSSLLSMLCAGCRADITVLALIGERGREVREFLEQVLTPQARARTV 177

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVATSD   + R     TA T+AEYF  +G  VLL+ DS+TR+A + REI   +GE+P 
Sbjct: 178 VVVATSDRPALERLKGIYTATTVAEYFRERGLKVLLMADSLTRYARAAREIGLAAGEIPA 237

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
              +P SVF+ LPRLLER G SE   G+ITA  ++L++GD+ N+P+AD  RS+LDGHIVL
Sbjct: 238 MGSFPASVFAALPRLLERAGNSES--GSITAFYTILLEGDDMNEPVADEARSLLDGHIVL 295

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R LA  G YP +D  ASVSR+  +  S + + L   L  +   ++E   +  +G Y+ G
Sbjct: 296 SRQLAGSGHYPAIDIAASVSRIMPQIVSTEHRALAQKLRQMQACYQEIELLVRVGEYQEG 355

Query: 399 VDLILDKAVHQVPIIYDFLKQ 419
            DL  D+A+ + P I  FL+Q
Sbjct: 356 QDLHADEALQRYPAICAFLQQ 376


>gi|260586966|ref|ZP_05852879.1| ATP synthase F1, alpha subunit [Blautia hansenii DSM 20583]
 gi|260542650|gb|EEX23219.1| ATP synthase F1, alpha subunit [Blautia hansenii DSM 20583]
          Length = 505

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 100/423 (23%), Positives = 174/423 (41%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDY-SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  +++ S     + G +  +     TV  +  +   G+ V  +       G V 
Sbjct: 13  ISILKEEIDNFHSTEGAKEVGNVIWVGDGIATVYGI-DHAMYGEIVTFENG---VKGMVQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + + +   G    I  G  V     R  +     + GR+++ALG PIDG   +   
Sbjct: 69  DIKRNEIGVIIFGKDTGIKEGTKVARTKKRAGVPVGGNFIGRIVDALGAPIDGKGEIQAD 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    I  + P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 129 DYR-PIEQEAPGIIDRKSVSVPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAIDTI 187

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +           + V  AT+ +   L+ + P +  
Sbjct: 188 LNQKGKDVMCIYVAIGQKASTVAKLVGTLEKYGAMEYTTVFSATASDCAPLQYIVPYSGT 247

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 248 ALAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSR 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     + +  I  +V SI DG I L   L  EG  P V+   SV
Sbjct: 308 LSEEAGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFEGVRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   S+   + ++ E +   +   +   +D      +     + + L
Sbjct: 368 SRVGGAAQTKAMKKASGSMRIDLAQYREMQ---VFTQFSSDLDETTKAQLDYGKCLMELL 424

Query: 418 KQS 420
           KQ 
Sbjct: 425 KQP 427


>gi|284504906|gb|ADB91402.1| ATP synthase alpha subunit [Enterococcus faecium]
          Length = 383

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 97/388 (25%), Positives = 157/388 (40%), Gaps = 14/388 (3%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           I         L +    G+ +     +    G    +  + V I  +G  E I  GD V 
Sbjct: 3   IGDGIARAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVK 58

Query: 89  HWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G+   +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +T
Sbjct: 59  RTGKILEVPVGEALIGRVVNPLGQPIDGLGEIV-TDKARPVEAMAPGVMQRKSVNEPMQT 117

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREF 205
           G++ ID   P+  GQR  V      GK+++      +        I   +G++   VR  
Sbjct: 118 GLKAIDALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRTQ 177

Query: 206 IEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +E          ++VV A + +   L  +AP     + E F   G +VL+I D +++ A 
Sbjct: 178 VETLKKYGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAV 237

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + RE++      P    YP  VF    RLLER      +   G++TA+  V     + + 
Sbjct: 238 AYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISA 297

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            I  +V SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  
Sbjct: 298 YIPTNVISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLAS 357

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQV 410
           + E         +   +D      +++ 
Sbjct: 358 YRELE---AFTQFGSDLDAATQAKLNRG 382


>gi|257852982|gb|ACV71502.1| ATP synthase beta subunit [Brunellia acutangula]
          Length = 489

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V   S  +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GRIAQIIGPVLDVVFPSGKMPNIYNALVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTCTTS-PIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|261187936|ref|XP_002620385.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis SLH14081]
 gi|239593396|gb|EEQ75977.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis SLH14081]
 gi|239614983|gb|EEQ91970.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis ER-3]
 gi|327357191|gb|EGE86048.1| ATP synthase subunit beta [Ajellomyces dermatitidis ATCC 18188]
          Length = 522

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 188/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  LA  Y+     Q G I  +      V    + +   L       G     L     
Sbjct: 36  ALRSLAARYASTSAAQPGKIHQVIGAVVDVKFDGEQLPSILNALETTNGGQKLVLEVAQH 95

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V   G    I       GR++N  G PID    + KG 
Sbjct: 96  LGENVVRTIAMDGTEGLVRGATVTDTGAPIMIPVGPGTLGRIMNVTGDPIDERGPI-KGT 154

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 155 KMAPIHAEAPAYVEQATSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 214

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 215 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 274

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 275 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 334

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 335 QERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 392

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D     D    + + +  ++  ++  +DI  I G     +      V +   
Sbjct: 393 LDSKSRMLDPRIVGDEHYAVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 451

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I   L
Sbjct: 452 LQRFLSQP---FTVAQVFTGIEGAL 473


>gi|227497329|ref|ZP_03927561.1| F0F1 ATP synthase subunit alpha [Actinomyces urogenitalis DSM
           15434]
 gi|226833200|gb|EEH65583.1| F0F1 ATP synthase subunit alpha [Actinomyces urogenitalis DSM
           15434]
          Length = 543

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 89/433 (20%), Positives = 172/433 (39%), Gaps = 24/433 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L +  E Y    V   + G++         V  L   V   + +  +       G  +
Sbjct: 13  SALDEFVESYKPAEVAAEEVGHVVFAADGIAHVEGL-PGVMANELLTFEDG---TAGLAM 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G +V   G    +     + GRV++ LG+PIDG   +   
Sbjct: 69  NLDERQIGVVVLGDFTGIDEGQVVRRTGEVLSVPVGDGYLGRVVDPLGRPIDGLGEI-AS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M+R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMSRKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRKTGKTAIALDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           L+  A  D  D     + I    G++G  +             + + ++ + + +    +
Sbjct: 188 LNQKAAWDSGDPDKQVRCIYVATGQKGSTIASVRATLEERGALEYTTIIASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  T   I +++   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLSSYTGSAIGQHWMYAGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDDLGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   +       +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGAAQIKAMKKVAGTLKLTLAQYRSMQ---AFAMFASDLDAATRQQLTR 424

Query: 410 VPIIYDFLKQSPS 422
              + + LKQ   
Sbjct: 425 GERLMELLKQPQF 437


>gi|227495027|ref|ZP_03925343.1| F0F1 ATP synthase subunit alpha [Actinomyces coleocanis DSM 15436]
 gi|226831479|gb|EEH63862.1| F0F1 ATP synthase subunit alpha [Actinomyces coleocanis DSM 15436]
          Length = 542

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 96/437 (21%), Positives = 175/437 (40%), Gaps = 23/437 (5%)

Query: 6   ETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L    E Y  S+  V + G+++        V  L   V   + +  +      LG   
Sbjct: 13  AALDSFVESYKPSETAVEEIGHVTQAADGIAHVEGL-PGVMANELLRFEDG---TLGLAS 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLDIREIGVIILGDFTNIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGEITDI 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-----L 177
           D    +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK+      +
Sbjct: 129 DGVRALELQAPGVMARKSVHEPLQTGIKAIDSMIPIGRGQRQLIIGDRQTGKTQIALDAI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++        D     + I   +G++G  +               + +V + + +    +
Sbjct: 189 MNQRENWLSGDPKKQVRCIYVAIGQKGSTIAGVKGALEAAGAMEYTTIVASPASDPAGYK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 249 FLAPYTGSAIGQHWMYDGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKLSDELGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNGNQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   R +     +   +D    + + +
Sbjct: 369 AVDVGVSVSRVGGAAQVKAMKKVSGTLKITLAQY---RSMAAFAMFASDLDDATKQQLTR 425

Query: 410 VPIIYDFLKQSPSDLSS 426
              +   LKQS ++  S
Sbjct: 426 GERLMALLKQSQANPYS 442


>gi|295105220|emb|CBL02764.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 470

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G I  +      V     +   L + +    + ++   +V + +N   V    +   E +
Sbjct: 4   GTIIRVAGPVVDVQFTAGRLPALQEALTVTAEGAERTMEVTQHVNETTVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G            GR+ + LG+PIDG  ++ +      I  K P    ++ 
Sbjct: 64  GKGMPVEATGHGLTAPVGEGTLGRMFDPLGRPIDGKGAVDELP-HWPIHRKAPGFAEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 ATEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGCDLWGEMNASGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +  + G+IT+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALMGRMPSAVGYQPTLANELGALQERI--TSTKDGSITSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPLAS SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G    +D      V +   +  FL Q 
Sbjct: 361 KVQSILQRYQELQDIIAILGMDE-LDENDKLTVMRARKLQKFLSQP 405


>gi|34539457|gb|AAQ74612.1| F1-ATPase alpha subunit [Tecophilaea cyanocrocus]
          Length = 417

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGXNE-IQAGEXVEFA---SGVKGIALXLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSXVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|34539429|gb|AAQ74598.1| F1-ATPase alpha subunit [Schelhammera multiflora]
          Length = 418

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      G V++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGPVVDALGVPIDGRGALSDHE-RXRVXVKAPXIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIXRGQRELIIGDRQTGKTAIAIDXILNQKQIHSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|145301172|ref|YP_001144013.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166201688|sp|A4STP3|ATPB_AERS4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|142853944|gb|ABO92265.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 462

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 191/410 (46%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSDNLGQVIR-INLDIVYICPVG 76
           +  G+I  I      +      V        VV +G+    + +V + I   +V    +G
Sbjct: 1   MSNGFIVQIIGAVVDIEFPQDAVPQVYDAVKVVSEGQGQGLVLEVQQQIGGGVVRCITMG 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G+  ++       GR++N LG+PID    +G+ +    I    P  
Sbjct: 61  SSDGLRRGLEVMNSGKSIQVPVGVSTLGRIMNVLGEPIDEKGPIGEEE-RWSIHRAAPSY 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 120 EDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 179

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  + +  N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 180 AGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 239

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +    G+IT+V 
Sbjct: 240 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTRTGSITSVQ 297

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 298 AVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHY 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ETARGVQTVLQRYKELKDIIAILGMDELSEED-KLTVARARKIERFLSQP 406


>gi|313576715|gb|ADR66865.1| ATP synthase beta subunit [Ternstroemia stahlii]
 gi|313576717|gb|ADR66866.1| ATP synthase beta subunit [Ternstroemia peduncularis]
          Length = 477

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V  L  +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|313576705|gb|ADR66860.1| ATP synthase beta subunit [Ternstroemia sp. WH-2010]
          Length = 475

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 184/423 (43%), Gaps = 29/423 (6%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
              G I  I      V  L  +   + + +V +G   D LGQ I +  ++        V 
Sbjct: 9   RNVGRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVR 66

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 67  AVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHR 125

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 126 SAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 185

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 186 GVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTAL 245

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 246 TMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 304

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 305 -TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 363

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 364 TMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 422

Query: 418 KQS 420
            Q 
Sbjct: 423 SQP 425


>gi|317185327|gb|ADV15990.1| ATP synthase F1 subunit alpha [Plantago coronopus]
          Length = 381

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 89/388 (22%), Positives = 155/388 (39%), Gaps = 23/388 (5%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               V  L + +  G+ V          G  + +  + V I   G    I  GDLV   G
Sbjct: 1   GIARVYGL-KEIQAGEMVEFATG---VKGIALNLENENVGIVVFGSDTAIQEGDLVKRTG 56

Query: 92  RFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
                P      GRV++ LG PIDG   LG  +    +  K P  + R+ V +  +TG++
Sbjct: 57  SIVDVPAGRAMLGRVVDGLGLPIDGKGPLGAHE-RRRVEVKAPGIIERKSVHEPMQTGLK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERG 199
            +D   P+  GQR  +      GK+ +      +                 +   +G++ 
Sbjct: 116 AVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKILNERATSEKETLYCVYVAIGQKR 175

Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + ++     N    S++V AT+ +   L+ +AP +   + E+F     + L+I D 
Sbjct: 176 STVAQLVQILAEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEFFRDNAMHALIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER          G++TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL
Sbjct: 296 AGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSL 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILD 404
              + ++ E   +     +   +D    
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQ 380


>gi|186886271|gb|ACC93538.1| ATPase F1 alpha subunit [Juncus longistamineus]
          Length = 370

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVDFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDALGAPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 120 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 179

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 180 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 239

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 240 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 299

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 300 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 356

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 357 FAQFGSDLDAATQ 369


>gi|153835939|ref|ZP_01988606.1| FliIL [Vibrio parahaemolyticus AQ3810]
 gi|149750693|gb|EDM61438.1| FliIL [Vibrio parahaemolyticus AQ3810]
          Length = 449

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 153/438 (34%), Positives = 244/438 (55%), Gaps = 8/438 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L+  LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSDALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             +  + Y+ P+     +  G  V    G   +  S+ W GRV+N LG+P+D    L  G
Sbjct: 70  GFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGIPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 D-RVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREFI  +   +  +K++++ A +DESP++R  A L    +
Sbjct: 189 KNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 249 AEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     + ++   +   + + +++  +GGY+PG D  LD++V   P +  +L+QS 
Sbjct: 369 STCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSYLQQSA 428

Query: 422 SDLSSEDV-FQEITKKLQ 438
           ++         E+ +  Q
Sbjct: 429 NEAVDYTTSLTELAQMFQ 446


>gi|29423534|gb|AAO73596.1| lateral flagellar FliI-like assembly ATPase protein [Vibrio
           parahaemolyticus]
          Length = 451

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 153/438 (34%), Positives = 244/438 (55%), Gaps = 8/438 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L+  LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 14  ERLSDALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 71

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             +  + Y+ P+     +  G  V    G   +  S+ W GRV+N LG+P+D    L  G
Sbjct: 72  GFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGMPLKGG 131

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 132 D-RVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 190

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREFI  +   +  +K++++ A +DESP++R  A L    +
Sbjct: 191 KNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATLLCHRV 250

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 251 AEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 311 NPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 370

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     + ++   +   + + +++  +GGY+PG D  LD++V   P +  +L+QS 
Sbjct: 371 STCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSYLQQSA 430

Query: 422 SDLSSEDV-FQEITKKLQ 438
           ++         E+ +  Q
Sbjct: 431 NEAVDYTTSLTELAQMFQ 448


>gi|28901388|ref|NP_801043.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260362942|ref|ZP_05775811.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|260880229|ref|ZP_05892584.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|260895346|ref|ZP_05903842.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|260901171|ref|ZP_05909566.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|28809935|dbj|BAC62876.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308085703|gb|EFO35398.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           Peru-466]
 gi|308091672|gb|EFO41367.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AN-5034]
 gi|308109341|gb|EFO46881.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           AQ4037]
 gi|308112402|gb|EFO49942.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus
           K5030]
 gi|328469322|gb|EGF40268.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus
           10329]
          Length = 449

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 153/438 (34%), Positives = 244/438 (55%), Gaps = 8/438 (1%)

Query: 6   ETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63
           E L+  LA   S  +    G +  +  +      +     L    + +    D +  QV+
Sbjct: 12  ERLSDALASLDSIPVARVTGRLIKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVV 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
             +  + Y+ P+     +  G  V    G   +  S+ W GRV+N LG+P+D    L  G
Sbjct: 70  GFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGMPLKGG 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + +  K    + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  
Sbjct: 130 D-RVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMIT 188

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           ++   D +++ L+GERGREVREFI  +   +  +K++++ A +DESP++R  A L    +
Sbjct: 189 KNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATLLCHRV 248

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER G SE
Sbjct: 249 AEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERAGNSE 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++TA+ +VL +GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  AS+SR  
Sbjct: 309 NPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASISRCM 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                     + ++   +   + + +++  +GGY+PG D  LD++V   P +  +L+QS 
Sbjct: 369 STCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSYLQQSA 428

Query: 422 SDLSSEDV-FQEITKKLQ 438
           ++         E+ +  Q
Sbjct: 429 NEAVDYTTSLTELAQMFQ 446


>gi|34539361|gb|AAQ74564.1| F1-ATPase alpha subunit [Magnolia grandiflora]
          Length = 392

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 89/400 (22%), Positives = 164/400 (41%), Gaps = 23/400 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
               + ++ E   +  +  +   +D +     ++   + +
Sbjct: 356 SKLELAQYRE---VAALAQFGSDLDAVTQALPNRGARLTE 392


>gi|6689002|emb|CAB65349.1| ATP synthase beta subunit [Pentas lanceolata]
          Length = 498

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + D +V  GK  D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYDALVVTGK--DTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTAPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|77461949|ref|YP_351456.1| F0F1 ATP synthase subunit alpha [Pseudomonas fluorescens Pf0-1]
 gi|115312267|sp|Q3K439|ATPA_PSEPF RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|77385952|gb|ABA77465.1| ATP synthase alpha chain [Pseudomonas fluorescens Pf0-1]
          Length = 514

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 96/442 (21%), Positives = 186/442 (42%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIEKLDVTSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              LG  +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLGNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + D     +   +G++   +   +     +     +++V A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKDSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIIVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|332105879|gb|AEE01402.1| ATP synthase beta chain [Luehea divaricata]
          Length = 493

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|298373444|ref|ZP_06983433.1| ATP synthase F1, alpha subunit [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298274496|gb|EFI16048.1| ATP synthase F1, alpha subunit [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 526

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 101/441 (22%), Positives = 167/441 (37%), Gaps = 36/441 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL    +K    + G +  ++     +  LS     G+ +  +         V+ +  D 
Sbjct: 16  QLEGIDTKVKFEEVGRVLQVSDGVVRIFGLS-NAESGELLEFENGER---AVVMNLEEDN 71

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +G    I  GD+V    +   I       GRVIN LG+PIDG  S+    L M +
Sbjct: 72  VGAVLLGTTANIKEGDIVKRTRKIASIPTGEGLVGRVINPLGQPIDGRGSIDGELLEMPL 131

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  + RQ V +  +TG+  ID   P+  GQR  +      GK+ +      +   +
Sbjct: 132 ERKAPGVIFRQPVNEPLQTGLIAIDAMIPIGRGQRELIIGDRQTGKTAIGIDTIINQRDN 191

Query: 189 -------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    I   +G++G  V   +           ++V+ A++ +   LR  AP     
Sbjct: 192 YLAGKPVYCIYVAIGQKGSTVANIVNILEEKGAMDYTIVISASASDPAALRFYAPFAGAA 251

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           I EYF   G + L+I D +++ A + RE++           YP  +F    RLLER    
Sbjct: 252 IGEYFRDTGRHALVIYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAAKI 311

Query: 301 --------------------EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
                                K  G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 312 IANDDVARQMNDLPEVLKDKIKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLET 371

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     KK+  +L     ++ E         +   +D
Sbjct: 372 GLFNAGIRPAINVGISVSRVGGNAQIKAMKKIAGTLKTDQAQYRELE---AFSKFGGDMD 428

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
            +  + + +       L Q  
Sbjct: 429 PVTKRTLDKGRKNATLLVQPQ 449


>gi|241758951|ref|ZP_04757063.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114]
 gi|241320772|gb|EER57005.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114]
          Length = 465

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  +      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQVIGAVVDVEFPRDAIPHVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|261400612|ref|ZP_05986737.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970]
 gi|313669152|ref|YP_004049436.1| ATP synthase beta chain [Neisseria lactamica ST-640]
 gi|269209698|gb|EEZ76153.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970]
 gi|309379543|emb|CBX21909.1| ATP synthase F1, beta subunit [Neisseria lactamica Y92-1009]
 gi|313006614|emb|CBN88080.1| ATP synthase beta chain [Neisseria lactamica 020-06]
          Length = 465

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  +      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQVIGAVVDVEFPRDAIPHVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|118917322|dbj|BAF40443.1| ATP synthase beta subunit [Elatine triandra]
          Length = 489

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVTFPRGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVIDEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|134294012|ref|YP_001117748.1| FliI/YscN family ATPase [Burkholderia vietnamiensis G4]
 gi|134137169|gb|ABO58283.1| ATPase, FliI/YscN family [Burkholderia vietnamiensis G4]
          Length = 465

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 158/421 (37%), Positives = 226/421 (53%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 45  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 102

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR    +      GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 103 AGLSPETTVVPSGREHVFAVGDALFGRVLDGLGRPLDDLGPV-TGAAWVSTQQDPPNPLA 161

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 162 RKLIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 221

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 222 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 281

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G  +  +G+ITA+ +VLV+
Sbjct: 282 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAG--QGARGSITALYTVLVE 339

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   ++  + +
Sbjct: 340 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQQAAARV 399

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       +
Sbjct: 400 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQASHEDVRFDALLAKLTR 459

Query: 437 L 437
           L
Sbjct: 460 L 460


>gi|225075914|ref|ZP_03719113.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens
           NRL30031/H210]
 gi|224952770|gb|EEG33979.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens
           NRL30031/H210]
          Length = 465

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  +      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQVIGAVVDVEFPRDAIPHVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|256575374|gb|ACU87654.1| AtpD [Gallibacterium anatis]
 gi|256575378|gb|ACU87655.1| AtpD [Gallibacterium anatis]
 gi|256575380|gb|ACU87656.1| AtpD [Gallibacterium anatis]
 gi|270357554|gb|ACZ81009.1| AtpB [Gallibacterium anatis]
          Length = 452

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 186/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V++  N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYEALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+PID    +G+      I    P  
Sbjct: 56  SSDGLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQANSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|224438105|ref|ZP_03659040.1| flagellum-specific ATP synthase [Helicobacter cinaedi CCUG 18818]
 gi|313144545|ref|ZP_07806738.1| flagellum-specific ATP synthase FliI [Helicobacter cinaedi CCUG
           18818]
 gi|313129576|gb|EFR47193.1| flagellum-specific ATP synthase FliI [Helicobacter cinaedi CCUG
           18818]
          Length = 472

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 160/389 (41%), Positives = 227/389 (58%), Gaps = 4/389 (1%)

Query: 52  QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALG 110
           QG+   +LG VI I  +  +I P    E    GD V        I       GRV+N LG
Sbjct: 85  QGEKKQSLGMVIAIEGEKFFISPFSFVEGHKCGDKVEILNHGLNIPVGEAMLGRVVNPLG 144

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID   SL     +  +M     A+ R  +++ F+ G++ ID       GQ++G+FAGS
Sbjct: 145 EPIDDKGSL-HTQATTPLMRSPLSALKRGLIDEVFEVGVKSIDSILTCGKGQKMGIFAGS 203

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL 230
           G+GKSTL+ M  R       +I+L+GERGREV EFI   L ++L  +++VVATSD+SP++
Sbjct: 204 GVGKSTLMGMIVRGAKAPIKVIALIGERGREVPEFIYKNLNNDLTNTILVVATSDDSPLM 263

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           RK    +A+ IAEYF S G++VL I+DS+TRFA + REI    GE P ++GYP SV + L
Sbjct: 264 RKYGAFSAMAIAEYFKSLGNDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLL 323

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P+L+ER G  E   G+ITA  +VLV+GD+ +DPIAD  RSILDGHIVLNR L + G YPP
Sbjct: 324 PQLMERAGK-EDSVGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLNRDLTDMGIYPP 382

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++ L S SR+ +   S +    V     L    +E   +  IG Y+ G D+ LD+A+++ 
Sbjct: 383 INILNSASRIINDIISPEHLGYVRKFRRLYSLIKENEVLIRIGAYQRGADIELDEAINKR 442

Query: 411 PIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
             +  FLKQ   +    +    E+ K +Q
Sbjct: 443 TAMEAFLKQEIDEKWDFQRSLDELCKIMQ 471


>gi|226947195|ref|YP_002802268.1| F0F1 ATP synthase subunit alpha [Azotobacter vinelandii DJ]
 gi|226722122|gb|ACO81293.1| ATP synthase F1, alpha subunit [Azotobacter vinelandii DJ]
          Length = 514

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 101/442 (22%), Positives = 184/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +    +          G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPAEISEIIKQRIASSDVTAQARNEGTVVSVSDGIVRIYGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +S G      GR   +       GRV++ALG PIDG
Sbjct: 60  -IYGMALNLEQDSVGAVILGSYLGLSEGMSAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +G   LS  +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPIG-AKLSDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L      +  D   + +   VG++   +   +           ++VV A++ ES  L+ 
Sbjct: 178 ALAVDAIINQKDSGIRCVYVAVGQKQSTIANVVRKLEEHGALANTIVVAASASESAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEQFTKGAVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|326774103|ref|ZP_08233385.1| ATP synthase F1, alpha subunit [Actinomyces viscosus C505]
 gi|326636242|gb|EGE37146.1| ATP synthase F1, alpha subunit [Actinomyces viscosus C505]
          Length = 543

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 90/432 (20%), Positives = 172/432 (39%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L + AE Y    V   + G++         V  L       + +  +       G  +
Sbjct: 13  SALNEFAESYKPAEVAAEEVGHVVFAADGIAHVEGL-PGAMANELLTFEDG---TAGLAM 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G +V   G    +     + GRV++ LG+PIDG   + + 
Sbjct: 69  NLEERQIGVVVLGSFDGIDEGQVVRRTGEVLSVPVGDAYLGRVVDPLGRPIDGLGEI-EA 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMARKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIALDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           L+     +  D     + I    G++G  +             + + +V + + +    +
Sbjct: 188 LNQKEAWESGDPNKQVRCIYVATGQKGSTIAAVRATLEERGALEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLSPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCSKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   +       +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQVKAMKKVAGTLKITLAQYRSMQ---AFAMFASDLDAATRAQLTR 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GERLMELLKQPQ 436


>gi|212896652|gb|ACJ38529.1| membrane-bound ATP synthase subunit B [Shuteria involucrata var.
           vestita]
          Length = 470

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVVFSPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|145598585|ref|YP_001162661.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
 gi|145210281|gb|ABP39688.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
          Length = 500

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 161/462 (34%), Positives = 242/462 (52%), Gaps = 28/462 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 39  LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 96

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF---------------RIS 96
            +   +V+  N   +++ P+   E I  G  V+      G                 ++ 
Sbjct: 97  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSFASKQLP 156

Query: 97  PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
                 GRV++   KP+DG  +   G     +++     + R  + +    G+R I+   
Sbjct: 157 LGPELLGRVLDGSAKPLDGLPAPETG-YRAPLITPPINPLQRTAIVQVLDVGVRTINALL 215

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   
Sbjct: 216 TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRA 275

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE
Sbjct: 276 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 335

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 336 PPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 395

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y
Sbjct: 396 VVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAY 455

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 456 AAGSDPLLDKAIALYPQMEAFLQQGMFERSSFDDACQHLKVL 497


>gi|25808463|gb|AAN74358.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGASVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRTLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|261338638|ref|ZP_05966522.1| ATP synthase F1, alpha subunit [Bifidobacterium gallicum DSM 20093]
 gi|270276357|gb|EFA22211.1| ATP synthase F1, alpha subunit [Bifidobacterium gallicum DSM 20093]
          Length = 552

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 181/439 (41%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           E L +  + Y  +     + G++++       VT L       + +  +      LG   
Sbjct: 13  EALNEFVDSYKPSDTPTAEVGHVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + K 
Sbjct: 69  NLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGFLGRVVDPLGNPIDGLGEI-KS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 188 INQKKNWESGDPKKQVRCIYVAIGQKGSTIASVRQSLEEAGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKDVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 308 RLLERCARVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + R+       +   +   +D      +++
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLARYRSLESFAM---FASDLDAASKNQLNR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + L+Q      S +
Sbjct: 425 GSHLTELLRQPQFSPYSNE 443


>gi|186886279|gb|ACC93542.1| ATPase F1 alpha subunit [Juncus potaninii]
          Length = 370

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 21/373 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 120 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 179

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 180 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 239

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 240 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 299

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 300 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 356

Query: 392 IGGYRPGVDLILD 404
              +   +D    
Sbjct: 357 FAQFGSDLDDATQ 369


>gi|225352599|ref|ZP_03743622.1| hypothetical protein BIFPSEUDO_04224 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156793|gb|EEG70187.1| hypothetical protein BIFPSEUDO_04224 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 542

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 180/439 (41%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L +  E Y  +     + GY+++       VT L       + +  +      LG   
Sbjct: 13  KALDEFVESYKPSDTPTQEVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + K 
Sbjct: 69  NLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGEI-KT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDEPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 188 INQKRNWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEESGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      +++
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLNR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GSHLTELLKQPQFSPYSME 443


>gi|77964181|gb|ABB13426.1| ATP synthase subunit beta [Clostridium paradoxum]
          Length = 465

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 113/422 (26%), Positives = 191/422 (45%), Gaps = 16/422 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      +   S  +  L + +    +    + +V   I  D V    +   + +
Sbjct: 7   GKVVQIIGPVLDIKFSSDNLPNLLNAIEIYHEGRKIVAEVAQHIGDDTVRCIAMSSTDGL 66

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D +       +       GR+ N LG P+D    +      + I    P   +++ 
Sbjct: 67  VRGIDAIDTGNAISVPVGRKTLGRIFNVLGDPVDNKPEVEDAP-KLPIHRPAPSFEDQET 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + S VGE
Sbjct: 126 ATEILETGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKEHGGLSVFSGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   + +    + K+ +V    +E P  R    LT +T+AEYF  +   +VLL 
Sbjct: 186 RTREGNDLYHEMIDSGVIDKTTLVYGQMNEPPGARMRVALTGLTMAEYFRDQEGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ D      +  ++  
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRQIAALGIYPAVDPLDSTSRILDPNIVGREHYEVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +  ++ R++E +DI  I G     D      V +   I  FL Q     S  + F  + 
Sbjct: 364 GVQSVLQRYKELQDIIAILGMDELSDED-KLIVARARKIQRFLSQP---FSVAEQFTGMA 419

Query: 435 KK 436
            K
Sbjct: 420 GK 421


>gi|4995183|emb|CAB44042.1| H(+)-transporting ATP synthase [Hermannia erodioides]
          Length = 484

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 10  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I  + P
Sbjct: 68  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKRAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|84494528|ref|ZP_00993647.1| ATP synthase subunit A [Janibacter sp. HTCC2649]
 gi|84384021|gb|EAP99901.1| ATP synthase subunit A [Janibacter sp. HTCC2649]
          Length = 545

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 173/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y      +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALDTYVQSYEPGAASREEVGRVSDAGDGIAHVEGL-PSAMTNELLEFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G   +I  G  V   G    +     + GRV++ LG PIDG   + + 
Sbjct: 69  NLDVHNIGVVILGDFSKIEEGQEVKRTGEVLSVPVGDNFLGRVVDPLGNPIDGLGDI-QS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  + P  + R+ V +  +TG++ +D  TP+  GQR  +      GK+T+     
Sbjct: 128 DERRALELQAPNVVQRKSVHEPLQTGLKAVDAMTPIGRGQRQLIIGDRQTGKTTVAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            +          +   + I   +G++G  +               + +V A + +S   +
Sbjct: 188 INQKEFWETGDPNKQVRCIYVAIGQKGSTIASVRGTLEDAGAMEYTTIVAAPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +     + +  I  +V SI DG I L   L      P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKAGDVSAYIPTNVISITDGQIYLQADLFNANVRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K +   L   + +F           +   +D      + +
Sbjct: 368 AVDVGVSVSRVGGAAQTKAMKGVSGRLKLDLAQFRALE---AFAMFASDLDPASKAQLAK 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQS  +    E+    +  
Sbjct: 425 GARLVELLKQSQSNPFPVEEQVVSVWA 451


>gi|195183509|dbj|BAG66968.1| ATP synthase beta subunit [Isodendrion laurifolium]
          Length = 489

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPKIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|260432839|ref|ZP_05786810.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416667|gb|EEX09926.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 474

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 191/418 (45%), Gaps = 20/418 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V    Q   + + +  +      + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVHFEDQLPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+PID    +   + +  I    P    +   
Sbjct: 66  RGAEVVDTGAPISVPVGNATLGRILNVVGEPIDEKGPVEASE-TRAIHQPAPSFDEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SRL D A   + 
Sbjct: 303 VQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGER 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             K+ + +  ++ R++  +DI  I G     +      V +   I  FL Q P D++ 
Sbjct: 363 HYKVATDVQQILQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQ-PFDVAE 418


>gi|327188928|gb|EGE56120.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium
           etli CNPAF512]
          Length = 493

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 104/429 (24%), Positives = 188/429 (43%), Gaps = 18/429 (4%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IR 64
             L +  +  ++      G ++ +      V    +   + + +      +  + +V   
Sbjct: 10  SELGKEGKKMAEAATRSVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQH 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G    +       GR++N +G+P+D    L    
Sbjct: 70  LGENEVRTIAMDSSEGLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTA- 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 129 HKRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 188

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   + +        G    K+ +V    +E P  R 
Sbjct: 189 NVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARA 248

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE+F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +
Sbjct: 249 RVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQ 308

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +      IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VD
Sbjct: 309 MQERITTTTTGS--ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVD 366

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +  ++   +   + R++  +DI  I G     +     AV +  
Sbjct: 367 PLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQDIIAILGMDELSEED-KLAVARAR 425

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 426 KIERFLSQP 434


>gi|154251918|ref|YP_001412742.1| F0F1 ATP synthase subunit beta [Parvibaculum lavamentivorans DS-1]
 gi|190358697|sp|A7HT52|ATPB_PARL1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154155868|gb|ABS63085.1| ATP synthase F1, beta subunit [Parvibaculum lavamentivorans DS-1]
          Length = 478

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 107/416 (25%), Positives = 187/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      VT       + + +      +  + +V   +  + V    +   E ++
Sbjct: 6   GKIAQVIGAVVDVTFTDNLPAILNALETTNGGNRLVLEVAQHLGENTVRTIAMDTTEGLT 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+IN +G+P+D    + K +   EI  + P  + +   
Sbjct: 66  RGQEVRDTGNAITVPVGEGTLGRIINVIGEPVDEAGPV-KHEARREIHQEAPSFVEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 AQMLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +   +              K  +V    +E P  R    LT +T+AE+F
Sbjct: 185 TREGNDLYHEMIESGVNKDPNENNGDTTGSKCALVFGQMNEPPGARARVALTGLTVAEHF 244

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 245 RDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TTTTKG 302

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+ +   
Sbjct: 303 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILEPRV 362

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +       +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 363 VGQEHYDTARQVQEILQRYKSLQDIIAILGMDELSEED-KLVVARARKIERFLSQP 417


>gi|33440418|gb|AAQ19117.1| ATPase alpha subunit [Scheuchzeria palustris]
          Length = 376

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 161/374 (43%), Gaps = 18/374 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 4   SGVKGIALNLENENVGIVVFGSDTTIKEGDLVKRTGSIVDVPAGKSLLGRVVDALGVPID 63

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 64  GRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 122

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          L+  A+ +     +   +G++   V + ++     N  + S++V AT
Sbjct: 123 TAISVDTILNQKELNAKAKENEKLYCVYVAIGQKRSTVAQLVQILSSANALEYSILVAAT 182

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 183 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 242

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     +E   G++TA+  +     + +  I  +V  I DG I L   
Sbjct: 243 GDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETE 302

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D 
Sbjct: 303 LFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDA 359

Query: 402 ILDKAVHQVPIIYD 415
                +++   + +
Sbjct: 360 ATQALLNRGARLTE 373


>gi|309322105|ref|YP_003933921.1| ATP synthase CF1 beta subunit [Erodium texanum]
 gi|197132372|gb|ACH47704.1| ATP synthase CF1 beta subunit [Erodium texanum]
 gi|300069198|gb|ADJ66320.1| ATP synthase CF1 beta subunit [Erodium texanum]
          Length = 495

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V QG   D  GQ I +  ++        V    
Sbjct: 18  GRITQIIGPVLDVVFPKGKMPYIYNALVVQG--RDTAGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +S G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 76  MSATDGLSRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 DFIELDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYKEMKESGVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|332308599|ref|YP_004436450.1| ATP synthase F1, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175928|gb|AEE25182.1| ATP synthase F1, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 461

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 189/409 (46%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I      +      V        + +G       +V + +   +V    +G 
Sbjct: 1   MSQGKVVQIIGAVVDIEFPQDSVPKIYDALRITEGDLQGLTLEVQQQLGGGVVRTIALGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G   ++       GR+++ LG PID    +G+ +  M I  + P   
Sbjct: 61  TDGLRRGLAVENTGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPTYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 DQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT++ +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYE 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++ R++E +DI  I G     +     +V +   I  FL Q 
Sbjct: 358 TARGVQSVLQRYKELKDIIAILGMDELSEED-KLSVSRARKIQRFLSQP 405


>gi|222356606|gb|ACM48833.1| ATPase alpha subunit [Tiputinia foetida]
          Length = 371

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 155/373 (41%), Gaps = 21/373 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK    
Sbjct: 61  LGSHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 175 -STLLSMFARSDCFD--------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
             T+L+    +              +   +G++   V + ++     N  + S++V AT+
Sbjct: 120 IDTILNQKQINSNAKGTSESETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATA 179

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +   L  +AP +   + EYF   G + L+I D +++ A + R+++      P    +P 
Sbjct: 180 SDPAPLPFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPG 239

Query: 285 SVFSELPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER          G+ TA+  +     + +  I  +V  I DG I L   L
Sbjct: 240 DVFYLHSRLLERAAKRSDLTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICLETEL 299

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
              G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D  
Sbjct: 300 FYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VVAFAQFGSDLDAA 356

Query: 403 LDKAVHQVPIIYD 415
               +++   + +
Sbjct: 357 TQALLNRGARLTE 369


>gi|34539285|gb|AAQ74526.1| F1-ATPase alpha subunit [Eichhornia azurea]
          Length = 417

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G  V      S   G    +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGXMVEFA---SGVKGIAXNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV+ ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVXALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDXLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSSSETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|228017176|gb|ACP51996.1| ATP synthase CF1 alpha subunit [Pinus leiophylla var. chihuahuana]
          Length = 507

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 101/424 (23%), Positives = 171/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V             G  V   G+  +I  S  + GRV+NAL +PIDG       +
Sbjct: 67  LGSDNVGAVXXXXXXXXXXGSSVRATGKIAQIPVSDAYLGRVVNALAQPIDGKGXXXXXE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V    +T    ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVXXPLQTXXXXIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +V SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNVISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|169797646|ref|YP_001715439.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii AYE]
 gi|260557589|ref|ZP_05829803.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii ATCC 19606]
 gi|169150573|emb|CAM88482.1| membrane-bound ATP synthase , F1 sector, alpha-subunit
           [Acinetobacter baumannii AYE]
 gi|260408762|gb|EEX02066.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii ATCC 19606]
          Length = 519

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSAEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|66276263|gb|AAY44146.1| ATP synthase beta subunit [Combretocarpus rotundatus]
          Length = 479

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      +T    +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 3   GRITQIIGPVLDITFPPGKMPNIYNALIIKG--RDTGGQQINVTCEVQRLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKDSGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTML 357

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   K    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPQIVGDEHYKTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|313112899|ref|ZP_07798545.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624804|gb|EFQ08113.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 464

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEI 81
           G +  +      +     Q   L + +         + +V +   D V     +   + +
Sbjct: 7   GKVLQVIGPVLDIQFEDGQLPELLNAIEIDNHGEKLVVEVAQHTGDNVVRCIAMNSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G   ++       GRV N LG+P+D   +    +    I    P    +Q 
Sbjct: 67  VRGTEAVDTGEPIKVPVGDQCLGRVFNLLGEPVDNKPA-PAPEAYWPIHRPAPSYEEQQS 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 126 TTEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL 
Sbjct: 186 RTREGNDLYGEMTESGVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +    + V +   +  FL QS
Sbjct: 364 AVQKVLQRYKELQDIIAIMGMDELSEED-KRTVSRARKVQRFLSQS 408


>gi|20146634|gb|AAM12471.1| ATP synthase alpha subunit [Sladenia celastrifolia]
          Length = 389

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 87/393 (22%), Positives = 158/393 (40%), Gaps = 30/393 (7%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V          G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 4   GEMVEFATG---VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 61  VVDPLGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-------------------KVIISLVGERGREVREF 205
            +      GK+ +      +                         +   +G++   V + 
Sbjct: 120 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSXXXXXXXXXSETLYCVYVAIGQKRSTVAQL 179

Query: 206 IEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A 
Sbjct: 180 VQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAV 239

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + R+++      P    +P  VF    RLLER      +   G++TA+  +     + + 
Sbjct: 240 AYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSA 299

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 300 YIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 359

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           + E   +  +  +   +D      +++   + +
Sbjct: 360 YRE---VAALAQFGSDLDAATQALLNRGARLTE 389


>gi|5758911|gb|AAD50885.1| ATP synthase beta subunit [Sansevieria socotrana]
          Length = 485

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|332105859|gb|AEE01392.1| ATP synthase beta chain [Tilia americana]
          Length = 493

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I I  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINITCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|34539235|gb|AAQ74501.1| F1-ATPase alpha subunit [Calochortus minimus]
          Length = 405

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 157/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 6   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 63  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 122 LIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 181

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 182 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 242 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 301

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 302 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 358

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D       ++   + +  KQ  
Sbjct: 359 AFAQFGSDLDAATQALPNRGARLTEVPKQPQ 389


>gi|323977878|gb|EGB72964.1| ATPase FliI/YscN family protein [Escherichia coli TW10509]
          Length = 456

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 241/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKHISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E+  Q + +  
Sbjct: 433 QQGIFERADWEESLQGLERIF 453


>gi|226327723|ref|ZP_03803241.1| hypothetical protein PROPEN_01596 [Proteus penneri ATCC 35198]
 gi|225203427|gb|EEG85781.1| hypothetical protein PROPEN_01596 [Proteus penneri ATCC 35198]
          Length = 455

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 161/447 (36%), Positives = 237/447 (53%), Gaps = 18/447 (4%)

Query: 5   LETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE L++     +K   V Q G ++  T +      L   + LG   + +      + +V 
Sbjct: 9   LEKLSEAEARLNKIPRVRQYGRLTRATGLVMEAKGL--VMPLGSTCLIERTIGKTVEEVE 66

Query: 64  ----RINLDIVYICPVGIGEEISLGDLVF--------HWGRFRISPSACWCGRVINALGK 111
                 N   + + P+   E ++ G  V+        + GR ++       GRV++  G 
Sbjct: 67  SEVVGFNGSQMLLMPLQEVEGLTPGARVYAQATPGGENEGR-QLPLGDALLGRVLDGSGY 125

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG      G     +++     + R  +      G+R I+    +  GQR+G+FAGSG
Sbjct: 126 PLDGLPPPDTG-YRAPLITPPINPLQRTPITDVLDVGVRAINSLLTVGRGQRMGLFAGSG 184

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           +GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVVV A +D SP+L
Sbjct: 185 VGKSVLLGMMARFTQADVIVVGLIGERGREVKDFIENILGTEGLARSVVVAAPADVSPLL 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++L
Sbjct: 245 RMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKL 304

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP 
Sbjct: 305 PALVERAGNGVDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPA 364

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR           + V     L+  ++  RD+  +G Y  G D +LDKA+   
Sbjct: 365 IDIEASISRAMTSLIDKTHYRRVQMFKQLLSNYQRNRDLINVGAYAAGSDPMLDKAIALY 424

Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437
           P +  FL+Q   +  S     E   +L
Sbjct: 425 PSLAKFLQQDIQEQCSYQSACEQLNQL 451


>gi|156530149|gb|ABU75171.1| AtpB [Odyendyea zimmermannii]
          Length = 480

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E  DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELPDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|74318815|ref|YP_316555.1| F0F1 ATP synthase subunit beta [Thiobacillus denitrificans ATCC
           25259]
 gi|118573774|sp|Q3SF66|ATPB_THIDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|74058310|gb|AAZ98750.1| F-type H+-transporting ATP synthase, beta subunit [Thiobacillus
           denitrificans ATCC 25259]
          Length = 459

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      +  + + +  Q        Q  ++   +V    +G  +
Sbjct: 1   MSNGKIVQIIGAVVDVEFPRDAMPKVMEALKMQAPELTFEVQ-QQLGDGVVRTIAMGSTD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR++N LG P+D    +G  + +M I  K P   ++
Sbjct: 60  GLRRGMDVLSTGNPIMVPVGQKTLGRIMNVLGDPVDEAGPIG-AETTMPIHRKAPAYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P+  G ++G+F G+G+GK+  L    R+         + + V
Sbjct: 119 AATVEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAVQHSGFSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +     +  K  +V    +E P  R    LT +T+AEYF  +G +VLL
Sbjct: 179 GERTREGNDFYHEMKEGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT+  +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSFQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR+ D      +   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDATLVLSRQVAELGIYPAVDPLDSTSRILDPQVVGEEHYTVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + +++E RDI  I G           AV +   +  FL Q 
Sbjct: 357 RKVQGTLQKYKELRDIIAILGMDELS-PEDKLAVSRARKLQRFLSQP 402


>gi|21633423|gb|AAM52186.1| ATP synthase beta subunit [Dicranostyles mildbraediana]
          Length = 485

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V    + +  + + +V QG++++   +V ++  +  V    +   + +
Sbjct: 19  GRIVQIIGPVLDVAFPPRKMPNIYNALVVQGRDNNVTCEVQQLLGNNRVRAVAMSDTDGL 78

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    ++      GR+ N LG+P+D    +   + +  I    P  +    
Sbjct: 79  MRGMEVIDTGAPISVAVGGATLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQLDT 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 138 RLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 197

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 198 RTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 257

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 258 KQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 315

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 316 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 375

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|107025875|ref|YP_623386.1| ATP synthase FliI/YscN [Burkholderia cenocepacia AU 1054]
 gi|105895249|gb|ABF78413.1| ATP synthase FliI/YscN [Burkholderia cenocepacia AU 1054]
          Length = 458

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 158/421 (37%), Positives = 222/421 (52%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +  N   L  +V+  +     + P+G  
Sbjct: 38  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPNQPTLLAEVVGFSRQTTLLTPLGDV 95

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 96  AGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLDDRGPV-TGAAWVSTQQDPPNPLA 154

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R+ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 155 RKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGE 214

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI      +   +S+VVV+TSD   + R  + L A  IAE+F   G  VLL++
Sbjct: 215 RGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLV 274

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G  +   G+ITA+ +VLV+
Sbjct: 275 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAG--QGAHGSITALYTVLVE 332

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           G   +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     S   +   + +
Sbjct: 333 GGEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVASRAHQHAAARV 392

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 393 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAFCAQASDEDVRFDALLAKLTK 452

Query: 437 L 437
           L
Sbjct: 453 L 453


>gi|323968357|gb|EGB63764.1| ATPase FliI/YscN family protein [Escherichia coli M863]
 gi|327253073|gb|EGE64727.1| flagellar protein export ATPase FliI [Escherichia coli STEC_7v]
          Length = 456

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 241/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKHISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E+  Q + +  
Sbjct: 433 QQGIFERADWEESLQGLERIF 453


>gi|261379445|ref|ZP_05984018.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703]
 gi|319638951|ref|ZP_07993709.1| ATP synthase subunit beta [Neisseria mucosa C102]
 gi|284797899|gb|EFC53246.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703]
 gi|317399855|gb|EFV80518.1| ATP synthase subunit beta [Neisseria mucosa C102]
          Length = 465

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  +      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQVIGAVVDVEFPRDAIPHVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|319899411|ref|YP_004159508.1| ATP synthase beta chain [Bartonella clarridgeiae 73]
 gi|319403379|emb|CBI76943.1| ATP synthase beta chain [Bartonella clarridgeiae 73]
          Length = 531

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 107/435 (24%), Positives = 190/435 (43%), Gaps = 26/435 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I  +      V    +   + + +  +   +  + +V   +  + V    +   E 
Sbjct: 56  SVGEIRQVIGAVVDVYFEGELPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTEG 115

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V+  G +  +       GR++N +G+P+D    +        I  + P  M + 
Sbjct: 116 LVRGQKVYDTGTQICVPVGEETLGRIMNVIGEPVDEVGPIMATK-KRSIHQEAPKYMEQS 174

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VG
Sbjct: 175 TESEILITGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVG 234

Query: 197 ERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAE 243
           ER RE  +   + +   +              K  +V    +E P  R    L+ +TIAE
Sbjct: 235 ERTREGNDLYYEMIESRVNVNPKEKRGSTAGSKCALVYGQMNEPPGARARVALSGLTIAE 294

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 295 SFRDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTR 352

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D 
Sbjct: 353 IGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMMDP 412

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +   +   + +++ R++  +DI  I G     +      V +   I  FL Q   
Sbjct: 413 LIVGEEHYAVACQVQNILQRYKSLQDIIAILGMDELSEED-KLLVARARKIERFLSQP-- 469

Query: 423 DLSSEDVFQEITKKL 437
                + F   + KL
Sbjct: 470 -FHVAEAFTGASGKL 483


>gi|119475222|ref|ZP_01615575.1| ATP synthase F1, alpha subunit [marine gamma proteobacterium
           HTCC2143]
 gi|119451425|gb|EAW32658.1| ATP synthase F1, alpha subunit [marine gamma proteobacterium
           HTCC2143]
          Length = 514

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 93/442 (21%), Positives = 179/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L V       G + S+T     +  L+  V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKGRIDQLDVSAEAQNEGTVVSVTDGIIRIHGLT-NVMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVILGEYQSLAEGQTCKCTGRVLEVPVGPELQGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   +    +    P  + RQ V++  + G++ +D   P+  GQR  +     IGK+
Sbjct: 119 KGPINAKETDF-VEKVAPGVIARQSVDQPVQLGLKAVDSMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +      +      K +   +G++   +   +         + +++V AT+ +   ++ 
Sbjct: 178 AIAVDAIINQKGTGIKCVYVAIGQKASSIASVVRKLEEHGAMEHTIIVAATASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    ++ EY+  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCSMGEYYRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNANYVENFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P +D   SVSR+   A +   KKL   +   + ++ E         +   +
Sbjct: 358 ADMFNSGNRPAMDAGISVSRVGSSAQTKIIKKLSGGIRTALAQYREL---AAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D      +     + + +KQ  
Sbjct: 415 DDATRAQLDNGERVTELMKQKQ 436


>gi|162286757|ref|YP_001083238.2| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii ATCC
           17978]
 gi|184156496|ref|YP_001844835.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii ACICU]
 gi|213155560|ref|YP_002317605.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii AB0057]
 gi|215485000|ref|YP_002327241.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii AB307-0294]
 gi|239503044|ref|ZP_04662354.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii AB900]
 gi|301345726|ref|ZP_07226467.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii AB056]
 gi|301512768|ref|ZP_07238005.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii AB058]
 gi|301594497|ref|ZP_07239505.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii AB059]
 gi|332852652|ref|ZP_08434306.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii 6013150]
 gi|332869368|ref|ZP_08438746.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii 6013113]
 gi|332875630|ref|ZP_08443442.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii 6014059]
 gi|190358294|sp|A3M142|ATPA_ACIBT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|190358295|sp|B0VBP5|ATPA_ACIBY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739832|sp|B7H296|ATPA_ACIB3 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739833|sp|B7I1W2|ATPA_ACIB5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739834|sp|B2I100|ATPA_ACIBC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|183208090|gb|ACC55488.1| F0F1-type ATP synthase, alpha subunit [Acinetobacter baumannii
           ACICU]
 gi|193076044|gb|ABO10636.2| membrane-bound ATP synthase F1 sector, alpha-subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213054720|gb|ACJ39622.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii AB0057]
 gi|213987856|gb|ACJ58155.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii AB307-0294]
 gi|322506365|gb|ADX01819.1| atpA [Acinetobacter baumannii 1656-2]
 gi|323516233|gb|ADX90614.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332729120|gb|EGJ60467.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii 6013150]
 gi|332732786|gb|EGJ64002.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii 6013113]
 gi|332736203|gb|EGJ67218.1| ATP synthase F1, alpha subunit [Acinetobacter baumannii 6014059]
          Length = 514

 Score =  286 bits (731), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 3   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 60  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 119 KGPID-AKLTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 178 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSAEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQYAPYS 441


>gi|154686040|ref|YP_001421201.1| flagellum-specific ATP synthase [Bacillus amyloliquefaciens FZB42]
 gi|154351891|gb|ABS73970.1| FliI [Bacillus amyloliquefaciens FZB42]
          Length = 438

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 163/427 (38%), Positives = 239/427 (55%), Gaps = 11/427 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN---SDNLGQVIRINLDIVYI 72
           + +   + G +  +  +   +        +GD  +   K         +V+    + + +
Sbjct: 12  TADPYKRYGKVKRVIGLM--IESKGPESSIGDVCLIYPKGHAKKAIKAEVVGFQDENILL 69

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      I+ G +V   G   RI   A   G+V++A G+P+DG  +L KG   +     
Sbjct: 70  MPYLEAASIAPGSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGR-ALPKGLSPVSTEQP 128

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  M R  + +    G+R ID    +  GQRIG+FAGSG+GKSTL+ M A+    D  I
Sbjct: 129 PPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNI 188

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+LVGERGREVREFI +D   + LK+S+VVVATSD+  ++R  A  TA  IAEYF  KG 
Sbjct: 189 IALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGR 248

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NV+ ++DS+TR A + REI   +GE P  +GY  SVF+ LPRLLER G +E  +G ITA 
Sbjct: 249 NVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTGANE--QGTITAF 306

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+          
Sbjct: 307 YTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNISDTSHI 366

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDV 429
           +  +    L+  ++ + D+  IG Y+ G    +D+A+   P +  FLKQ   + +  ED 
Sbjct: 367 EAANKFRDLLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTEEPAQLEDS 426

Query: 430 FQEITKK 436
              +T  
Sbjct: 427 IAALTSL 433


>gi|148654683|ref|YP_001274888.1| F0F1 ATP synthase subunit alpha [Roseiflexus sp. RS-1]
 gi|190358198|sp|A5UQN5|ATPA_ROSS1 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148566793|gb|ABQ88938.1| ATP synthase F1, alpha subunit [Roseiflexus sp. RS-1]
          Length = 527

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 97/421 (23%), Positives = 168/421 (39%), Gaps = 22/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ---GKNSDNLGQVIRINLDIVYICPVGI 77
           V  G +  +      ++ L Q     + +      G++    G  + +  D V    +G 
Sbjct: 28  VNVGTVIQVGDGVARISGLEQ-AMASELLEFPPKAGRSEPVYGIALNLEKDSVSAIILGD 86

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              I  GD V   GR   +       GRV+NALG+PIDG   + +      I    P  +
Sbjct: 87  YLGIEEGDQVNSTGRVISVPVGQALIGRVVNALGQPIDGKGPI-QTTTYRPIERIAPGVI 145

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISL 194
            R+ V+   +TGI  ID   P+  GQR  +      GK+ +      +        I   
Sbjct: 146 TRKSVDTPVQTGIIAIDSMIPIGRGQRELIIGDRQTGKTAVAIDTIINQKGQGMVCIYVA 205

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG---- 249
           +G++  +V + I           ++VV AT+ ES  L+ +AP     + E     G    
Sbjct: 206 IGQKRAQVAQIINILEKYGALDYTIVVAATASESAALQYIAPYAGCAMGEEVMENGVMID 265

Query: 250 ----DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303
                + L++ D +++ A + R+++      P    YP  VF    RLLER     ++  
Sbjct: 266 GREVRDALIVYDDLSKHATAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLNEDYG 325

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G++TA+  +    ++ +  I  +V SI DG I L   L   G  P ++   SVSR+   
Sbjct: 326 GGSLTALPIIETQANDVSAYIPTNVISITDGQIYLETDLFNAGIRPALNVGISVSRVGGA 385

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           A +   + +   L   + +F   RD+     +   +D      + +   + + LKQ    
Sbjct: 386 AQTRAMRSVSDRLKIDMAQF---RDLAAFAQFASDLDATTRAQIERGQRLQEVLKQPQFQ 442

Query: 424 L 424
            
Sbjct: 443 P 443


>gi|14717960|gb|AAK72722.1| ATP synthase beta subunit [Bauhinia sp. Doyle s.n.]
          Length = 470

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           GYI+ I      V    + +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GYIAQIIGPVLDVAFPPRKMPNIYNALVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 70  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  K    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYKTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|25808421|gb|AAN74337.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDTIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|256575366|gb|ACU87651.1| AtpD [Gallibacterium anatis]
          Length = 452

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 186/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V++  N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYEALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+PID    +G+      I    P  
Sbjct: 56  SSDGLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQANSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVRQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|195183477|dbj|BAG66954.1| ATP synthase beta subunit [Anchietea salutaris]
          Length = 489

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    L     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPLDTCTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEANFAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|311103598|ref|YP_003976451.1| ATP synthase F1 subunit beta [Achromobacter xylosoxidans A8]
 gi|310758287|gb|ADP13736.1| ATP synthase F1, beta subunit [Achromobacter xylosoxidans A8]
          Length = 466

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    + + +
Sbjct: 52  LGDGVVRTIALGSSDGLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGPI-QHE 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 EKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 231 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSR 348

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +   +   + R++E RDI  I G          +AV +   I  FL 
Sbjct: 349 QLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILGMDELS-PEDKQAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|257470711|ref|ZP_05634801.1| F0F1 ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185]
 gi|317064916|ref|ZP_07929401.1| ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185]
 gi|313690592|gb|EFS27427.1| ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185]
          Length = 466

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 110/405 (27%), Positives = 191/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEIS 82
           G I+ I S    V+   Q   + + +  +  + + + +V +   + V     +   + + 
Sbjct: 5   GTITQIISAVVDVSFKDQLPSIYNALKVKVGDKELVLEVQQHLGNNVIRAVAMDSTDGLQ 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR++N LG+P+D    + + +  + I    P    ++  
Sbjct: 65  RGMEVIDTGSPIKVPVGKAVLGRILNVLGQPVDDGGPI-ETEEYLPIHRDAPSFEEQETE 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 124 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGER 183

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+  ++     +  K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 184 TREGRDLYDEMTESGVLSKTSLVYGQMNEPPGARLRVGLTGLTVAENFRDKEGQDVLLFI 243

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 244 DNIFRFTQAGSEVSALLGRMPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVP 301

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R++A  G YP VDPL S S+         +  ++   
Sbjct: 302 ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSAEVVGKEHYEVARE 361

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 362 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIQRFFSQP 405


>gi|197294097|ref|YP_002149718.1| ATP synthase CF1 beta subunit [Cicer arietinum]
 gi|197089785|gb|ACH41055.1| ATP synthase CF1 beta subunit [Cicer arietinum]
          Length = 491

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I   V   V    +   + + ++ QG   D +GQ I +  ++        +    
Sbjct: 21  GRVVQIIGPVLDVVFPPGKMPNIYNALIVQG--RDTVGQQINVTCEVQQLLGNNRIRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|119026447|ref|YP_910292.1| F0F1 ATP synthase subunit alpha [Bifidobacterium adolescentis ATCC
           15703]
 gi|154488034|ref|ZP_02029151.1| hypothetical protein BIFADO_01603 [Bifidobacterium adolescentis
           L2-32]
 gi|158512527|sp|A1A3C7|ATPA_BIFAA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|118766031|dbj|BAF40210.1| ATP synthase subunit alpha [Bifidobacterium adolescentis ATCC
           15703]
 gi|154083507|gb|EDN82552.1| hypothetical protein BIFADO_01603 [Bifidobacterium adolescentis
           L2-32]
          Length = 542

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 180/439 (41%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L +  E Y  +     + GY+++       VT L       + +  +      LG   
Sbjct: 13  KALDEFVESYKPSDTPTQEVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + K 
Sbjct: 69  NLDAREIGVVILGDFTGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGEI-KT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   VG++G  +    +          + +V + + +S   +
Sbjct: 188 INQKRNWESGDPKKQVRCIYVAVGQKGSTIASVKQSLEEAGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      +++
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLNR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GAHLTELLKQPQFSPYSME 443


>gi|313576703|gb|ADR66859.1| ATP synthase beta subunit [Ternstroemia impressa]
          Length = 469

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V  L  +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 2   GRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|153809937|ref|ZP_01962605.1| hypothetical protein RUMOBE_00318 [Ruminococcus obeum ATCC 29174]
 gi|149834115|gb|EDM89195.1| hypothetical protein RUMOBE_00318 [Ruminococcus obeum ATCC 29174]
          Length = 464

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +     +   L + +  +   +    +V  +I  D+V    +   + +
Sbjct: 7   GEVVQVIGPVLDIRFAHDELPALLNAIEIESNGAKLTAEVAQQIGDDVVRCIAMNSTDGL 66

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   V   G   +       GRV N LG P+D   +  +      I    P    +  
Sbjct: 67  VRGTKAVDTGGPITVPVGDACLGRVFNLLGDPVDNKPA-PEAKERWSIHRPAPSYEEQMP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 126 ATEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF  +   +VLL 
Sbjct: 186 RTREGNDLYNEMKESGVIDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  S LD   VL+R ++ +G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFSHLDATTVLSREISSQGIYPAVDPLDSTSRILSPEIVGKEHYEIAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           S+  ++ R++E +DI  I G     +    + V +   +  +L QS
Sbjct: 364 SVQRVLQRYKELQDIIAIMGMDELSEED-KRTVSRARKVQRYLSQS 408


>gi|6687483|emb|CAB64952.1| ATP synthase beta subunit [Exacum affine]
          Length = 498

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQSINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTIS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|24376219|ref|NP_720263.1| F0F1 ATP synthase subunit beta [Shewanella oneidensis MR-1]
 gi|81588954|sp|Q8E8C0|ATPB_SHEON RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|24351279|gb|AAN57706.1|AE015907_4 ATP synthase F1, beta subunit [Shewanella oneidensis MR-1]
          Length = 463

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ S N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALKITGEGSCN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG PID   ++G+ +    I    P 
Sbjct: 60  GTSDGLRRGLEVVNSGSPISVPVGTATLGRIMNVLGDPIDEAGAIGEEE-RYVIHRAAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEEQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDDD-KMTVSRARKIERFLSQP 406


>gi|238897372|ref|YP_002923049.1| type III secretion system ATPase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465127|gb|ACQ66901.1| type III secretion system ATPase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 446

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 156/421 (37%), Positives = 231/421 (54%), Gaps = 13/421 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
            V  G I  +      V+     V +G+    +   +  L +V+ I      + P    +
Sbjct: 32  AVYRGPILDVGRTLIKVSL--PGVRMGELCRIE--PNRILAEVVSIEQKTALLSPFSSCD 87

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V       ++  S    GR++N LG PID    LG       + +  P  + R
Sbjct: 88  GLYAGQWVSPLKYSHQVPVSMSLMGRILNGLGHPIDDGPGLGYH--WRSLDNAPPDPLKR 145

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           + +     TGIR +D       GQRIG+FA +G+GKSTLL M       D ++++L+GER
Sbjct: 146 KPITDQLVTGIRSLDAILSCGEGQRIGIFAAAGVGKSTLLGMLCDGSDADVMVLALIGER 205

Query: 199 GREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+E  L    + ++VVVVATSD   + R     TA TIAEYF   G  V+L++D
Sbjct: 206 GREVREFLEQVLTPKARQRTVVVVATSDRPALERLKGIYTATTIAEYFRDCGKKVVLMVD 265

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REI   +GE P A  +P SVF+++PRLLER G S+   G+ITA  +VLV+G
Sbjct: 266 SLTRYARAAREIGLAAGEPPAAGSFPPSVFAQMPRLLERTGNSDL--GSITAFYTVLVEG 323

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+P+AD VRS+LDGHI+L+R LA  G YP +D  ASVSR+  +  S+   ++   L 
Sbjct: 324 DDMNEPVADEVRSLLDGHIILSRKLAGAGHYPAIDIAASVSRIMPQIASSWHLEMAQKLR 383

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++ R+EE   +  +G Y+ G DL  D A+ + P + +FLKQ   +       ++  K L
Sbjct: 384 FILARYEEIELLVRVGEYQKGQDLEADDALKRYPAVCNFLKQKGGEHW---ALEKTLKML 440

Query: 438 Q 438
           +
Sbjct: 441 E 441


>gi|212715313|ref|ZP_03323441.1| hypothetical protein BIFCAT_00206 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661770|gb|EEB22345.1| hypothetical protein BIFCAT_00206 [Bifidobacterium catenulatum DSM
           16992]
          Length = 542

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 180/439 (41%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L +  E Y  +     + GY+++       VT L       + +  +      LG   
Sbjct: 13  KALDEFVESYKPSDTPTQEVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + K 
Sbjct: 69  NLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGEI-KT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDEPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 188 INQKRNWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEESGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      +++
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLNR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GSHLTELLKQPQFSPYSME 443


>gi|189017658|gb|ACD71498.1| F1-ATPase alpha subunit [Afrothismia gesnerioides]
          Length = 397

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 91/394 (23%), Positives = 164/394 (41%), Gaps = 22/394 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           +  G+ V      S   G  + +  + V +   G    I  GDLV   G     P     
Sbjct: 6   MKAGEMVEFA---SGVKGIALNLEKENVGLVVFGSETAIKEGDLVKRTGSIVDVPAGKAM 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG+P+DG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  G
Sbjct: 63  LGRVVDALGRPMDGRGTLSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLL--------SMFARSDCFD---KVIISLVGERGREVREFIEDYL 210
           QR  +      GK+ +          M +R  C       +   +G++   V + ++   
Sbjct: 122 QRELIIGDRQTGKTAIAIDTVLNQKQMNSRGTCESETLYCVYVAIGQKRSTVAQLVQIIK 181

Query: 211 GDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
             +  + S++V AT+ +   L+ +AP +   + EYF     + L+I D +++ A + R++
Sbjct: 182 EAHALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDHRMHALIIYDDLSKQAVAYRQM 241

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADS 327
           +      P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +
Sbjct: 242 SLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTN 301

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           V  I DG I L   L   G  P +    SVSR+   A S   K++  S    + ++ E  
Sbjct: 302 VIPITDGQICLETELFYRGLRPAIHVGLSVSRVGSAAQSRAMKQVCGSSKLELAQYRE-- 359

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +     +   +D      +++   + +  KQ  
Sbjct: 360 -VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 392


>gi|90421698|ref|YP_530068.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisB18]
 gi|118573734|sp|Q21CY7|ATPB_RHOPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|90103712|gb|ABD85749.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisB18]
          Length = 476

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 188/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + V  +  N+  + +V   +    V    +   E 
Sbjct: 7   QTGRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    +   +    I ++ P   ++ 
Sbjct: 67  LVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPV-ANEGLRPIHAEAPTYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+       D
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGD 363

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +    +  ++ +++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 364 EHYQTARMVQQVLQKYKSLQDIIAILGMDELSEED-KIAVARARKIERFLSQP 415


>gi|261378159|ref|ZP_05982732.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685]
 gi|269145622|gb|EEZ72040.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685]
          Length = 465

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  +      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQVIGAVVDVEFPRDAIPHVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|212896596|gb|ACJ38501.1| membrane-bound ATP synthase subunit B [Cullen australasicum]
          Length = 470

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVTFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|113869573|ref|YP_728062.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha H16]
 gi|123328788|sp|Q0K5M7|ATPB_RALEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113528349|emb|CAJ94694.1| Membrane-bound ATP synthase, F1 sector,beta-subunit [Ralstonia
           eutropha H16]
          Length = 467

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 169/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   +
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMEVKSTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L   I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 LRA-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV++   I  FL 
Sbjct: 350 QLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILGMDELS-PEDKLAVNRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|91777092|ref|YP_546848.1| F0F1 ATP synthase subunit beta [Methylobacillus flagellatus KT]
 gi|118573696|sp|Q1GXN0|ATPB_METFK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91711079|gb|ABE51007.1| ATP synthase F1, beta subunit [Methylobacillus flagellatus KT]
          Length = 465

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 186/411 (45%), Gaps = 15/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG----QVIR-INLDIVYICPV 75
            QG  +  I +V        Q   + D ++    +         +V + +   +V    +
Sbjct: 2   SQGKVVQCIGAVVDVEFPRDQMPKVYDALILDEDSPTVEAGLTLEVQQQLGDGVVRTIAM 61

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +S G  V + G   ++       GR+++ LG+PID    + + D    I  K P 
Sbjct: 62  GSSDGLSRGMKVKNTGSQIQVPVGHGTLGRIMDVLGRPIDEAGPI-EADEKRSIHQKAPT 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                      +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 121 FEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSV 180

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 181 FAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDEGR 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++
Sbjct: 241 DILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 299 QAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQIVGEEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   + R++E RDI  I G           AV +   I  FL Q 
Sbjct: 359 YSVARAVQSTLQRYKELRDIIAILGMDELS-PEDKLAVARARKIQRFLSQP 408


>gi|169632165|ref|YP_001705901.1| F0F1 ATP synthase subunit alpha [Acinetobacter baumannii SDF]
 gi|169150957|emb|CAO99572.1| membrane-bound ATP synthase , F1 sector, alpha-subunit
           [Acinetobacter baumannii]
          Length = 519

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L +       +       G I  ++     +  L+     G+ +   G   
Sbjct: 8   QLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLAD-AMYGEMIEFDGG-- 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    +  G      GR   +       GRV++ALG PIDG
Sbjct: 65  -LFGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + RQ V++  +TG + +D   P+  GQR  +      GK+
Sbjct: 124 KGPID-AKLTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKT 182

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +   ++ A+ +   K +   +G++   +   +           + VV A + +   ++ 
Sbjct: 183 AMAIDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQY 242

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ EYF  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 243 LAPYSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 302

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G    + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 303 LLERASRVSAEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 362

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            SL   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 363 TSLFNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 419

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D    K +     + + +KQ      S
Sbjct: 420 DEATRKQLEHGQRVTELMKQKQYAPYS 446


>gi|152980499|ref|YP_001353128.1| FliI flagellum specific ATP synthase [Janthinobacterium sp.
           Marseille]
 gi|151280576|gb|ABR88986.1| FliI flagellum specific ATP synthase [Janthinobacterium sp.
           Marseille]
          Length = 448

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 151/428 (35%), Positives = 225/428 (52%), Gaps = 26/428 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           +  G I+ +  +      L   + +G        N   +  +V+    D +++ P    E
Sbjct: 10  LVSGRITRVAGLVMEAVGL--KLAVGSACTVPLANGARIEAEVVGFENDRLFLMPQSDVE 67

Query: 80  EISLGDLVFHWGRFR---------------------ISPSACWCGRVINALGKPIDGDDS 118
            I  G  V+     +                     +       GRV++  G+P+D    
Sbjct: 68  GIVPGTRVYPVEVVQSLPRPGAVTHPRRRPSDRGRHLPVGIELLGRVLDGAGRPLDNLGP 127

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L     +  +  +    ++R  +      G+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 128 LNAAHAA-PLNVRAANPLSRAPITDVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVLL 186

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D  P++R      
Sbjct: 187 GMMARYTTADVIVVGLIGERGREVKEFIEQILGAEGLARSVVVAAPADTPPLMRLQGAAY 246

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE+F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 247 ATAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 306

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  ++  G+ITA  +VL +GD+  DPIADS R+ILDGHIVLNRSLAE G YP +D   S+
Sbjct: 307 GNGKEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLNRSLAEAGHYPAIDIEQSI 366

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      + + +K    L  L  R++  RD+  +G Y  G D +LD+A+     I  FL
Sbjct: 367 SRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSAGSDPVLDEAIALNSKIESFL 426

Query: 418 KQSPSDLS 425
           +Q  ++  
Sbjct: 427 QQDITERC 434


>gi|25808401|gb|AAN74327.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 353

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 4   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 64  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 122

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 123 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 182

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + RE++      P    +P  VF    RLLE
Sbjct: 183 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLE 242

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 243 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 302

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 303 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 353


>gi|299471880|emb|CBN77050.1| expressed unknown protein [Ectocarpus siliculosus]
          Length = 522

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 92/421 (21%), Positives = 161/421 (38%), Gaps = 36/421 (8%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + +A  A D  K +    + G + ++      V  L+  V  G+ V+         G  +
Sbjct: 53  KRIASTATDADKAVSEYNEVGKVVTVGDGIARVYGLN-NVQAGEMVIFDCG---LRGMAL 108

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    V +   G   EI  G  V   G    +       GRV++ LG PIDG   L   
Sbjct: 109 NLEESNVGVVIFGDDREILEGGTVKRTGSIVDVPVGPECLGRVLDGLGVPIDGAGPL-TT 167

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                   K P  + R+ V +  +TG++ +D   P+  GQR  V      GK+ +     
Sbjct: 168 KTRSRAEVKAPGIIPRKSVHEPVQTGLKAVDALIPIGRGQRELVIGDRQTGKTAICIDTI 227

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
            +             +G ++   +    G               S +   +AP +   I 
Sbjct: 228 INQK----------TKGDDLLYCVWLEGGGL-------------SAVATFLAPYSGAAIG 264

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + ++  D +++ A + R+++      P    YP  VF    RLLER      
Sbjct: 265 EYFRDNGKHAVIFYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGD 324

Query: 303 EKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             GN   TA+  +     + +  I  +V SI DG I L   L  +G+ P +    SVSR+
Sbjct: 325 ASGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESELFYQGQRPAISVGLSVSRV 384

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  ++   + ++ E   +     +   +D    + +++   +Y+ LKQ 
Sbjct: 385 GSAAQRKCMKQVAGTMKLELAQYRE---VAAFAKFGSDLDASTQQQLNRGVRLYELLKQD 441

Query: 421 P 421
            
Sbjct: 442 Q 442


>gi|293446321|ref|ZP_06662743.1| flagellar protein export ATPase FliI [Escherichia coli B088]
 gi|291323151|gb|EFE62579.1| flagellar protein export ATPase FliI [Escherichia coli B088]
          Length = 467

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 27  AKMAQLPTVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGTETHEVESEVVGFNG 84

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 85  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 143

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 144 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 202

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 203 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 262

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 263 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 322

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 323 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 382

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 383 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 442

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 443 QQGIFERADWEASLQGLERIF 463


>gi|156619211|gb|ABU88284.1| ATP synthase CF1 beta subunit [Chlamydomonas moewusii]
          Length = 508

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 188/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-----GQVIRINLDI-VYICPVG 76
           G +  I   V   V    Q   + + +    KN+  +      +V ++  D  V    + 
Sbjct: 38  GRVIQIIGPVLDIVFTKGQVPNIYNALTITAKNATGVELAVTCEVQQLLGDNAVRAVSMQ 97

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I  K P  
Sbjct: 98  PTDGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGPV-KVEDTLPIHRKAPAF 156

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 157 VDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 216

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 217 AGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALTALTMAEY 276

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 277 FRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 334

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 335 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQP 394

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D   +   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 395 WILGDKHYQTAQNVKKTLQRYKELQDIIAILGLDELSEDD-RQTVARARKIERFLSQP 451


>gi|330970308|gb|EGH70374.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 443

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  Q      L    ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMGSTE 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 61  GLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEE-RWGIHRPAPSFAEQ 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 298 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V++   I  FL Q 
Sbjct: 358 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVNRARKIQRFLSQP 403


>gi|209919363|ref|YP_002293447.1| flagellum-specific ATP synthase [Escherichia coli SE11]
 gi|209912622|dbj|BAG77696.1| flagellum-specific ATP synthase [Escherichia coli SE11]
 gi|324118990|gb|EGC12879.1| ATPase FliI/YscN family protein [Escherichia coli E1167]
          Length = 457

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPTVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGTETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|171690264|ref|XP_001910057.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945080|emb|CAP71191.1| unnamed protein product [Podospora anserina S mat+]
          Length = 565

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 184/428 (42%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G I  +      V   ++ +   L       G N   L     +   +V    +   E +
Sbjct: 95  GKIYQVIGAVVDVKFDTEKLPPILNALETQNGGNKLVLEVAQHLGESVVRCIAMDGTEGL 154

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    I       GR++N  G PID    + K D  + I ++ P  + +  
Sbjct: 155 VRGAKAVDTGAPITIPVGPATLGRIMNVTGDPIDERGPI-KTDKRLPIHAEAPEFIEQST 213

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 214 TAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGE 273

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   +         D   K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 274 RTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQ 333

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +   KG+IT+V
Sbjct: 334 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSV 391

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      + 
Sbjct: 392 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEH 451

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            +  + +  ++  ++  +DI  I G     +      V +   I  FL Q     +   V
Sbjct: 452 YQTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP---FTVAQV 507

Query: 430 FQEITKKL 437
           F  I  KL
Sbjct: 508 FTGIEGKL 515


>gi|15677764|ref|NP_274928.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis MC58]
 gi|81857552|sp|Q9JXQ2|ATPB_NEIMB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|7227192|gb|AAF42263.1| ATP synthase F1, beta subunit [Neisseria meningitidis MC58]
 gi|308390032|gb|ADO32352.1| ATP synthase beta chain [Neisseria meningitidis alpha710]
 gi|316985556|gb|EFV64503.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76]
 gi|325129472|gb|EGC52302.1| ATP synthase F1, beta subunit [Neisseria meningitidis OX99.30304]
 gi|325139587|gb|EGC62127.1| ATP synthase F1, beta subunit [Neisseria meningitidis CU385]
 gi|325200985|gb|ADY96440.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76]
 gi|325201427|gb|ADY96881.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240149]
 gi|325207408|gb|ADZ02860.1| ATP synthase F1, beta subunit [Neisseria meningitidis NZ-05/33]
          Length = 465

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRAIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|118603005|ref|YP_904220.1| F0F1 ATP synthase subunit beta [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166222411|sp|A1AXU2|ATPB_RUTMC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118567944|gb|ABL02749.1| ATP synthase F1 subcomplex beta subunit [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 459

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 119/408 (29%), Positives = 195/408 (47%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIG 78
           +  G I+ I      V   +     + D +           +V +   D +V    +G  
Sbjct: 1   MNTGKITQIIGAVIDVEFSVDSMPKIYDALKVSETGLTL--EVQQQLGDYVVRTIAMGGS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V + G   ++       GR++N LG+PID    +G+ ++S  I    P    
Sbjct: 59  EGLKRGLKVTNTGGPIKVPVGVKTLGRIMNVLGEPIDNAGDIGQ-EVSWAIHRSAPAYHE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + S 
Sbjct: 118 LAPAAELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  +G +VL
Sbjct: 178 VGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGHDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++ SE+  L ERI  +  +KG+IT++ +V
Sbjct: 238 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTKKGSITSIQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-L 372
            V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D     +E   +
Sbjct: 296 YVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +     +V +   I  FL Q 
Sbjct: 356 ARGVQSVLQRYKELKDIIAILGMDELSEED-KHSVSRARKIQRFLSQP 402


>gi|257438169|ref|ZP_05613924.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
 gi|257199368|gb|EEU97652.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
          Length = 464

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEI 81
           G +  +      +      +  L + +         + +V ++  D V     +   + +
Sbjct: 7   GKVIQVIGPVLDIQFKDGELPDLLNAIEIDNHGQKLVVEVAQLTGDNVARCIAMSSTDGL 66

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V      R+       GRV N LG+P+D   +    +    I    P    +Q 
Sbjct: 67  VRGTDAVDTGESIRVPVGDQCLGRVFNLLGEPVDNKPA-PTPEAYWPIHRPAPSYEEQQS 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 126 TTEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF   K  +VLL 
Sbjct: 186 RTREGNDLYGEMTESGVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +      V +   +  FL QS
Sbjct: 364 DVQKVLQRYKELQDIIAIMGMDELSEED-KLTVSRARKVQRFLSQS 408


>gi|254250972|ref|ZP_04944290.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa
           AUO158]
 gi|124893581|gb|EAY67461.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa
           AUO158]
          Length = 464

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRESMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR+++ LG+PID    + + +    I  K P 
Sbjct: 61  GASDGLRRGLTVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESETKRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|21633395|gb|AAM52172.1| ATP synthase beta subunit [Metaporana parvifolia]
          Length = 481

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 184/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V +G+ ++   +V ++  +  V    +   + +
Sbjct: 15  GRIVKIIGPVLDVAFPRGKMPNIYNALVVKGRETNVTCEVQQLLGNNRVRTVAMSDTDGL 74

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V   G    +       GR+ N LG+P+D    +   + S  I    P  +    
Sbjct: 75  TRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTSSPIHRSAPAFIQLDT 133

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 134 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 193

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 194 RTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 253

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 254 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 311

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 312 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGE 371

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|189017704|gb|ACD71521.1| F1-ATPase alpha subunit [Dictyostega orobanchoides]
          Length = 398

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 89/389 (22%), Positives = 159/389 (40%), Gaps = 20/389 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I   DLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEEDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL- 214
            +      GK+ +      +               +   +G++   V + ++     N  
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVYVAIGQKRSTVAQLVQILSEANAL 183

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++    
Sbjct: 184 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 243

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V SI 
Sbjct: 244 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISIT 303

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   +   
Sbjct: 304 DGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAF 360

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             +   +D      +++   + +  KQ  
Sbjct: 361 AQFGSDLDAATQALLNRGARLTEVPKQPQ 389


>gi|21633427|gb|AAM52188.1| ATP synthase beta subunit [Maripa repens]
          Length = 487

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V QG++++   +V ++  +  V    +   + +
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNNVTCEVQQLLGNNRVRAVAMSDTDGL 80

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LGKP+D    +   + +  I    P  +    
Sbjct: 81  MRGMEVIDTGAPISVPVGGVTLGRIFNVLGKPVDNLGPVD-TNTTSPIHRSAPAFIQLDT 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 140 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 199

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 200 RTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVY 259

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 260 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 317

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +      S 
Sbjct: 318 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSE 377

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|15646029|ref|NP_208211.1| flagellum-specific ATP synthase [Helicobacter pylori 26695]
 gi|2493149|sp|O07025|FLII_HELPY RecName: Full=Flagellum-specific ATP synthase
 gi|2314594|gb|AAD08462.1| flagellar export protein ATP synthase (fliI) [Helicobacter pylori
           26695]
          Length = 434

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|218699498|ref|YP_002407127.1| flagellum-specific ATP synthase [Escherichia coli IAI39]
 gi|218369484|emb|CAR17249.1| flagellum-specific ATP synthase [Escherichia coli IAI39]
          Length = 457

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 239/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A ++REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMALREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLESYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|209915626|ref|NP_001119645.2| ATP synthase subunit beta, mitochondrial [Acyrthosiphon pisum]
          Length = 521

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 191/414 (46%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V    +   + + +  Q ++   + +V   +  + V    +   E
Sbjct: 52  TSQGRIVAVIGAVVDVQFDEELPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTE 111

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI   A   GR+IN +G+PID    +   D +  I ++ PP +  
Sbjct: 112 GLVRGQEVLDCGSPIRIPVGAETLGRIINVIGEPIDERGPID-TDKTAPIHAEAPPFVEM 170

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 171 SVEQEILVTGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 230

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 231 GERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 290

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  + K  G+I
Sbjct: 291 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTSK--GSI 348

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 349 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIG 408

Query: 368 DEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           DE   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 409 DEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 461


>gi|161523286|ref|YP_001578298.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|189351941|ref|YP_001947569.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC
           17616]
 gi|221202177|ref|ZP_03575212.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M]
 gi|221208762|ref|ZP_03581761.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2]
 gi|221214288|ref|ZP_03587260.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1]
 gi|226740175|sp|A9AJG4|ATPB_BURM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160340715|gb|ABX13801.1| ATP synthase F1, beta subunit [Burkholderia multivorans ATCC 17616]
 gi|189335963|dbj|BAG45033.1| F-type H+-transporting ATPase beta chain [Burkholderia multivorans
           ATCC 17616]
 gi|221165943|gb|EED98417.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1]
 gi|221171394|gb|EEE03842.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2]
 gi|221177971|gb|EEE10383.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M]
          Length = 464

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR+++ LG+PID    + + +    I  K P 
Sbjct: 61  GASDGLRRGLTVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESETKRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|25808413|gb|AAN74333.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808483|gb|AAN74368.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808499|gb|AAN74376.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|319940677|ref|ZP_08015019.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B]
 gi|319805828|gb|EFW02595.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B]
          Length = 467

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 187/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQ-VIRINLD------IVYICPV 75
           G I  +      +      +  + + +V +   +D+L +  +   ++      +V    +
Sbjct: 4   GQIVQVIGAVVDIEFPRDAMPKIYEALVLKNDEADSLAENGLTFEVEQQLGDGVVRTIAM 63

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  E +  G  V   GR   +       GR+++ LG+PID    +G  ++   I +  P 
Sbjct: 64  GTSEGLRRGMKVETTGREISVPVGPKTLGRIMDVLGRPIDDCGPIGSEEIR-PIHNVAPK 122

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                      +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 123 FDELSPSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQYGGYSV 182

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 183 FAGVGERTREGNDFYHEMGESKVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGR 242

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           ++LL +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  ++   G+IT++
Sbjct: 243 DILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERIASTKT--GSITSI 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 301 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQVDPNIIGLEH 360

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G    +       V +   I ++L Q 
Sbjct: 361 YTVARRVQETLQRYKELRDIIAILGMDE-LAPEDKLVVQRARKIQNYLSQP 410


>gi|220917455|ref|YP_002492759.1| ATPase, FliI/YscN family [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955309|gb|ACL65693.1| ATPase, FliI/YscN family [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 435

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 161/418 (38%), Positives = 232/418 (55%), Gaps = 11/418 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++ +T +          V  G+ V  +    + L  +V+ +  D   + P G    + 
Sbjct: 22  GRVTRLTGLVLEAAV--GGVRQGEAVEIRAPGREPLQAEVVGLRDDRAVLVPFGDLGGVG 79

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           L   V   GR   I       GRV++ LG+P+DG   L  G     +    P  + R+ V
Sbjct: 80  LDAEVVPTGRAHTIRAGPGLLGRVLDGLGRPLDGA-PLPAGLEEWAVDRPAPNPLARRPV 138

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
                 G+RV+D F     GQRIG+FAGSG+GKSTLL   AR    D  ++ LVGERGRE
Sbjct: 139 AAPLPLGVRVLDGFLTAGEGQRIGLFAGSGVGKSTLLGQLARGARADLCVVCLVGERGRE 198

Query: 202 VREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E     + L +SVVV ATSD   ++R  A   A  +AE+F+ +GD VLL++DS+T
Sbjct: 199 VREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVAEWFAERGDRVLLLVDSVT 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A ++RE+   +GE P  +GYP SVF+ LPRLLER G   + +G ITAV +VLV G + 
Sbjct: 259 RYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGN--RARGGITAVYTVLVAGGDL 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            +PIAD VR ILDGH+VL+R++A  GR+P VDPL S+SR+     +         +  L+
Sbjct: 317 EEPIADEVRGILDGHVVLDRAVASGGRFPAVDPLQSLSRVMPAVAAPAHLAAAGRVRALL 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
                 RD+  +G YR G D   D A+ ++P I  FL+Q   + +    F+E  ++L+
Sbjct: 377 AAHARVRDLVALGAYRAGADPEADLALARLPAIEAFLRQPLGEAA---PFEETLRRLE 431


>gi|71891799|ref|YP_277528.1| F0F1 ATP synthase subunit alpha [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|115312237|sp|Q494C5|ATPA_BLOPB RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|71795905|gb|AAZ40656.1| ATP synthase, F1 sector, alpha-subunit [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 513

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 102/443 (23%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +           +   G I+++      +  L+  V  G+ +      
Sbjct: 1   MQLNSNEISKLIKRRIAQFDITCEIRNEGTITAVGDGVIHIHGLT-NVMQGEMIALP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
           SD     + +  D V    +G    +S G +    G   R+       GRV+NALG P+D
Sbjct: 57  SDQFAVALNLERDSVGAVVMGSYLNLSEGMVAKCTGNILRVPVGTALLGRVVNALGVPVD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               + +      + +  P  ++R+ +++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 NKGVI-QCSCYFPVEAVAPSVIDRKSIDEPIQTGYKSVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           S L      +      K I   VG++   V   ++          ++VV+A++ ES +L+
Sbjct: 176 SALAIDAIINQRYSGVKCIYVAVGQKATTVANVVKKLEEHRALSNTIVVIASASESAVLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF   G++ L++ D +++ A + R+I+      P    YP  +F    
Sbjct: 236 YLAPYSGCAMGEYFRDLGEDALIVYDDLSKQAIAYRQISLLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G      G++TA+  V     + +  I  +V SI DG I L
Sbjct: 296 RLLERASRVSSDYVERCTHGKITGRTGSLTAIPIVETQAGDVSSFIPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+P  SVSR+   A +   K L   +   + ++ E   +     +   
Sbjct: 356 ESHLFNSGIRPAVNPGISVSRVGGSAQTNIMKVLSGGIRTALAQYRE---LAAFSQFASE 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D +  K +     + + LKQ  
Sbjct: 413 LDDVTRKQLQHGQKVTELLKQKQ 435


>gi|318060708|ref|ZP_07979431.1| F0F1 ATP synthase subunit alpha [Streptomyces sp. SA3_actG]
 gi|318075499|ref|ZP_07982831.1| F0F1 ATP synthase subunit alpha [Streptomyces sp. SA3_actF]
          Length = 530

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 89/447 (19%), Positives = 173/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +++       +  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTTAGDGIARIEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    +  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGVEEGQPVTRTGEVLSVGVGDGYLGRVVDPLGTPIDGLGEIATS 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK      T+
Sbjct: 129 -GRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +             + + +V + + +    +
Sbjct: 188 INQRANWESGDPKKQVRCIYVAIGQKGSTIASVRSSLEEAGALEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDLGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + ++ E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRLDLAQYRELESFAAFG---SDLDAASKAQLAR 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ     +++ED    I  
Sbjct: 425 GQRLVELLKQDQYQPMATEDQVVSIWA 451


>gi|313115087|ref|ZP_07800576.1| ATP synthase F1, alpha subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622601|gb|EFQ06067.1| ATP synthase F1, alpha subunit [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 584

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 185/433 (42%), Gaps = 15/433 (3%)

Query: 2   QKNLETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +L TL    EDY       +GG + S       V  +++ V  G+ V          G
Sbjct: 85  KPSLATLKTRIEDYKPAETSAEGGVVISSADGIVHVEGMNRAV-YGEIVTFDNGAK---G 140

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            V  ++ + + I      E + +G +V   G R  I     + GRVI+ LG+PIDG   +
Sbjct: 141 MVESVDPEQLGIMLFDGAETVGVGTMVTRSGKRAGIPVGDAFLGRVISPLGEPIDGKGPI 200

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
                +  I  + P  + RQ V+    TGI  ID   P+  GQR  +      GK+    
Sbjct: 201 EAVGYN-PIEKQAPGILERQSVDTPLHTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAT 259

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + +     I   +G++   +     D         + +V AT+ +S  L+ +AP 
Sbjct: 260 DAILNQKNTGVLCIYVAIGQKASSIARVAGDLQKHGAMSYTTIVAATASDSAPLQYIAPY 319

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               +AEYF S+G +VL++ D +++ A + R I+      P    YP  VF    RLLER
Sbjct: 320 AGTALAEYFMSQGKSVLIVYDDLSKHAVAYRAISLLLRRSPGREAYPGDVFYLHSRLLER 379

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G+ITA+  V     + +  I  +V SI DG I L  +L   G  P V+  
Sbjct: 380 SCRMRDDLGGGSITALPIVETQAGDVSAYIPTNVISITDGQIFLESALFNAGNRPAVNVG 439

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A +   KK  ++L   + +++   D+     +   +D    + +     + 
Sbjct: 440 LSVSRVGGAAQTKAMKKANANLRIELAQYK---DMESFAQFSSDLDAETRRQLDHGKALM 496

Query: 415 DFLKQSPSDLSSE 427
           + LKQ      S+
Sbjct: 497 EMLKQPLYQPKSD 509


>gi|223983270|ref|ZP_03633463.1| hypothetical protein HOLDEFILI_00743 [Holdemania filiformis DSM
           12042]
 gi|223964763|gb|EEF69082.1| hypothetical protein HOLDEFILI_00743 [Holdemania filiformis DSM
           12042]
          Length = 467

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 118/407 (28%), Positives = 194/407 (47%), Gaps = 13/407 (3%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGD-FVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G I  +      +     Q   L +  VV +G+      +V   I  D+V    +   + 
Sbjct: 6   GKIVQVIGPVVDIRYAAGQLPALNNAIVVEKGEGQRITVEVAQHIGDDVVRCIAMASTDG 65

Query: 81  ISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G D +       +       GR+ N LG  IDG   L + +  + I    P    + 
Sbjct: 66  LVRGMDCLDTEAPISVPVGQQVLGRMFNVLGDEIDGLGELPEPNKKLPIHRAAPSFEEQL 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     +++ VG
Sbjct: 126 TSAEILETGIKVIDLLCPYARGGKIGLFGGAGVGKTVLMQELIHNIAKEHGGMSVVAGVG 185

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   +     +  K+V+V    +ESP  R    L+ +T+AEYF  +   +VLL
Sbjct: 186 ERTREGNDMYHEMKDSGVLDKTVLVYGQMNESPGARMRVALSGLTMAEYFRDQEGQDVLL 245

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  ++G+IT+V ++ 
Sbjct: 246 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKRGSITSVQAIY 303

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLV 373
           V  D+  DP   +  S LD   VL+RS+A  G YP VDPL S SR+ D     D   ++ 
Sbjct: 304 VPADDLTDPAPATTFSHLDAKTVLDRSIAALGIYPAVDPLESSSRMLDPLVVGDEHYEVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  L+ R++E +DI  I G     D    K V++     +FL Q 
Sbjct: 364 RGVQQLLQRYKELQDIIAILGMDELSDED-KKIVNRARRARNFLSQP 409


>gi|7708662|emb|CAB90000.1| ATP synthase beta subunit [Strychnos nux-vomica]
          Length = 475

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 183/421 (43%), Gaps = 28/421 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G  +  I  V       ++   + + +V QG   D +GQ I +  ++        V   
Sbjct: 14  PGRIVQXIGPVLDAAFGPAKMPNIXNALVVQG--RDTVGQPINVXCEVQQLLGNNRVRAV 71

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 72  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 131 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 190

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 191 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 250

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 251 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 309 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 368

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 369 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 427

Query: 420 S 420
            
Sbjct: 428 P 428


>gi|89092247|ref|ZP_01165201.1| ATP synthase subunit B [Oceanospirillum sp. MED92]
 gi|89083335|gb|EAR62553.1| ATP synthase subunit B [Oceanospirillum sp. MED92]
          Length = 458

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 117/406 (28%), Positives = 190/406 (46%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +   KN   L    ++   +V    +G  E 
Sbjct: 1   MSSGTIVQIIGAVVDVEFPRDSVPKVYDALTVTKNGLTLEVQQQLGDGVVRAIAMGQTEG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +S G  V + G    +       GR+++ LG PID    +G+ +  M I  K P    + 
Sbjct: 61  VSRGQDVANTGAPVSVPVGTATLGRIMDVLGNPIDECGEIGEEE-RMPIHRKAPSYDEQA 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 120 ASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL 
Sbjct: 180 ERTREGNDFYYEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  S LD  +VL+R +AE G YP VDPL S SR  D      +  ++  
Sbjct: 298 PADDLTDPSPATTFSHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGTEHYEIAR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 NVQGVLQRYKELKDIIAILGMDELSEED-KSLVARARKIQRFLSQP 402


>gi|66048345|ref|YP_238186.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
           B728a]
 gi|237801681|ref|ZP_04590142.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|257485616|ref|ZP_05639657.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289649121|ref|ZP_06480464.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|289677529|ref|ZP_06498419.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
           FF5]
 gi|298489521|ref|ZP_07007530.1| ATP synthase beta chain [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|302185823|ref|ZP_07262496.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae
           642]
 gi|75499956|sp|Q4ZL24|ATPB_PSEU2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|63259052|gb|AAY40148.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. syringae
           B728a]
 gi|298155948|gb|EFH97059.1| ATP synthase beta chain [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|320321670|gb|EFW77769.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331127|gb|EFW87098.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330881925|gb|EGH16074.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330952352|gb|EGH52612.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae Cit 7]
 gi|330961486|gb|EGH61746.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. maculicola
           str. ES4326]
 gi|330976386|gb|EGH76443.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|330987002|gb|EGH85105.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331011905|gb|EGH91961.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331024540|gb|EGI04596.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 459

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  Q      L    ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMGSTE 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 61  GLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEE-RWGIHRPAPSFAEQ 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 298 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V++   I  FL Q 
Sbjct: 358 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVNRARKIQRFLSQP 403


>gi|25808405|gb|AAN74329.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808425|gb|AAN74339.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808433|gb|AAN74343.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808439|gb|AAN74346.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808445|gb|AAN74349.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808447|gb|AAN74350.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808453|gb|AAN74353.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808457|gb|AAN74355.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808461|gb|AAN74357.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808475|gb|AAN74364.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808485|gb|AAN74369.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808491|gb|AAN74372.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808493|gb|AAN74373.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808497|gb|AAN74375.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|218264988|ref|ZP_03478612.1| hypothetical protein PRABACTJOHN_04322 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221656|gb|EEC94306.1| hypothetical protein PRABACTJOHN_04322 [Parabacteroides johnsonii
           DSM 18315]
          Length = 526

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 104/454 (22%), Positives = 174/454 (38%), Gaps = 38/454 (8%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E  S  +  +  G +  ++     +  L       + +            V+ 
Sbjct: 12  AILRQQLEGISTGIRTEEVGTVLQVSDGVARIYGL-DNAEANELLQFDNGME---AIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  +++  GD+V   GR   I  S    GRVI+ LG PIDG   +    
Sbjct: 68  LEEDNVGAVLLGPTDQVKEGDIVKRTGRIASIDVSEGMIGRVIDPLGNPIDGKGEIMGET 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK      T++
Sbjct: 128 CEMPLERKAPGVIFRQPVNEPLQTGIKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +     +  +    I   +G++G  V   +           ++VV AT+ +   ++  AP
Sbjct: 188 NQRGNYEAGNPVYCIYVAIGQKGSTVASLVNTLQEKGAMDYTIVVSATASDPAAMQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDSGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQPEVARQMNDLPDSMKDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     +F E       GG 
Sbjct: 368 IFLETDLFNQGNRPAINVGISVSRVGGNAQLKAMKKVAGTLKIDQAQFRELESFSKFGGE 427

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP-SDLSSED 428
              +D +    + +       L Q   S +  ED
Sbjct: 428 ---MDAVTAFTIDKGQKNTQLLIQPQYSPMPVED 458


>gi|219847906|ref|YP_002462339.1| F0F1 ATP synthase subunit beta [Chloroflexus aggregans DSM 9485]
 gi|254808138|sp|B8G6G6|ATPB_CHLAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219542165|gb|ACL23903.1| ATP synthase F1, beta subunit [Chloroflexus aggregans DSM 9485]
          Length = 471

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 114/412 (27%), Positives = 188/412 (45%), Gaps = 18/412 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G I  I  V          V        +   +    + +V + +   +V    +G  + 
Sbjct: 5   GVIQEIIGVVIRAKFPEDQVPEIYNAIEIPLEQGGRLVCEVQQQLGNGVVKAVAMGSTDG 64

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   GR   +       GRV N LG PIDG    G       I    P    + 
Sbjct: 65  LRRGLEVIDTGRPIAVPVGPATLGRVFNVLGDPIDGGPPFGPEVERRPIHRDPPSFEEQS 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVG 196
              + F+TGI+VID+  P   G +  +F G+G+GK+ ++     +   ++    + + VG
Sbjct: 125 TQAQIFETGIKVIDLIAPFTRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVG 184

Query: 197 ERGREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  + I +              K+++V    +E P  R    LTA+T+AEYF  +G
Sbjct: 185 ERSREGNDLIHEMREARIDENTTVFDKTIMVFGQMNEPPGARLRVGLTALTMAEYFRDQG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            ++LL +D+I RF  +  E+++  G +P   GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 245 RDILLFIDNIFRFVQAGSEVSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D++ DP   +V S LD  I L RS+AE   +P VDPLAS SR+ D      +
Sbjct: 303 MQAVYVPADDYTDPAPATVFSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +  ++ R+++ +DI  I G     D      V +   I  F  Q 
Sbjct: 363 HYRVAQEVKRVLQRYKDLKDIIAILGMEELSDED-KLTVQRARKIELFFSQP 413


>gi|117619208|ref|YP_858679.1| F0F1 ATP synthase subunit beta [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166201687|sp|A0KQX8|ATPB_AERHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117560615|gb|ABK37563.1| ATP synthase F1, beta subunit [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 462

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 191/410 (46%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSDNLGQVIR-INLDIVYICPVG 76
           +  G+I  I      +      V        VV +G+    + +V + I   +V    +G
Sbjct: 1   MSNGFIVQIIGAVVDIEFPQDAVPQVYDALKVVSEGQGQGLVLEVQQQIGGGVVRCITMG 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G+  ++       GR++N LG PID    +G+ +    I    P  
Sbjct: 61  SSDGLRRGLEVVNSGKSIQVPVGVSTLGRIMNVLGDPIDEKGPIGEEE-RWSIHRAAPSY 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 120 EDQSNSNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 179

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  + +  N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 180 AGVGERTREGNDFYHEMMESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 239

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 240 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 297

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 298 AVYVPADDLTDPSPATTFAHLDATVVLSRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHY 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ETARGVQTVLQRYKELKDIIAILGMDELSEED-KLTVARARKIERFLSQP 406


>gi|70733499|ref|YP_263274.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens Pf-5]
 gi|118573723|sp|Q4K3A9|ATPB_PSEF5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|68347798|gb|AAY95404.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens Pf-5]
          Length = 458

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 190/408 (46%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYDALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG PID    +G+ +    I    P    +
Sbjct: 60  GLKRGLDVNNTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RWGIHRPAPSFAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVSRARKIQRFLSQP 402


>gi|114509240|gb|ABI75188.1| ATPase alpha subunit [Zannichellia palustris]
          Length = 384

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 94/392 (23%), Positives = 166/392 (42%), Gaps = 22/392 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKSLLGRVVDALGVPIDGRGSLSAHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKELNATAKENEKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCALGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLEL 355

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            ++ E   +     +   +D      +++   
Sbjct: 356 AQYRE---VAAFAQFGSDLDAATQALLNRGAR 384


>gi|104784436|ref|YP_610934.1| F0F1 ATP synthase subunit alpha [Pseudomonas entomophila L48]
 gi|122985702|sp|Q1I2I5|ATPA_PSEE4 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|95113423|emb|CAK18151.1| ATP synthase F1, alpha subunit [Pseudomonas entomophila L48]
          Length = 514

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 96/442 (21%), Positives = 181/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIEKLDVSSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGS-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VFGMALNLEQDSVGAVVLGDYTSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLNNTETDA-VEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +      +  +     +   VG++   +   +           ++VV A++ ES  L+ 
Sbjct: 178 AMAVDAIINQKNSGIFCVYVAVGQKQSTIANVVRKLEEAGALANTIVVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNAGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|328924790|gb|ADO64897.2| ATP synthase CF1 beta subunit [Theobroma cacao]
          Length = 498

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|121534927|ref|ZP_01666746.1| ATP synthase F1, beta subunit [Thermosinus carboxydivorans Nor1]
 gi|121306526|gb|EAX47449.1| ATP synthase F1, beta subunit [Thermosinus carboxydivorans Nor1]
          Length = 469

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 189/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDN----LGQVIRINLD-IVYICP 74
           +  G +  +      +     Q   + + +  +G+N D       +V++   D  V    
Sbjct: 1   MNTGRVIQVIGPVVDIEFPPEQLPAIYNAIRIEGQNGDVKVKLTAEVMQHLGDSTVRCVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G      G   ++       GRV N LG+ +D DD     +    I    P
Sbjct: 61  MSSTDGLVRGMTAVDTGAPIKVPVGKGTLGRVFNVLGETVDNDDREVIAEDYWPIHRPAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               ++      +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +     
Sbjct: 121 SFEEQETSTTILETGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFS 180

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF    
Sbjct: 181 VFAGVGERTREGNDLWMEMRESGVIDKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDVH 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT
Sbjct: 241 GQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTKKGSIT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      
Sbjct: 299 SVQAVYVPADDLTDPAPAATFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIIGQ 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 359 EHYEVARGVQEVLQRYKELQDIIAILGMEELSDED-KLTVARARKIQRFLSQP 410


>gi|238920314|ref|YP_002933829.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146]
 gi|238869883|gb|ACR69594.1| flagellum-specific ATP synthase, putative [Edwardsiella ictaluri
           93-146]
          Length = 452

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 153/429 (35%), Positives = 230/429 (53%), Gaps = 15/429 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
             + G ++  T +    T L   + +G     +  +     D   +V+  N   +++ P+
Sbjct: 25  ARRYGKLTRATGLVLEATGL--QLPIGATCRVERHDGHQVLDVEAEVVGFNGRQLFLMPL 82

Query: 76  GIGEEISLGDLV------FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
              E I  G  V       + G+ ++       GRV++   +P+DG     + D    + 
Sbjct: 83  EEVEGIVPGARVWAPAAALNSGK-QLPLGPALLGRVLDGSARPLDGLPPPDESD-HGGLS 140

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           S+    + R  + +    G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D 
Sbjct: 141 SQPFNPLQRTPITQVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADV 200

Query: 190 VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           +++ L+GERGREV++FIE+ LGD   ++SVV+ A +D SP+LR      A  IAE F  +
Sbjct: 201 IVVGLIGERGREVKDFIENILGDEGRQRSVVIAAPADVSPLLRMQGAAYATRIAEDFRDR 260

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+IT
Sbjct: 261 GQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSIT 320

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +D  AS+SR         
Sbjct: 321 AFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAEAGHYPAIDIEASISRAMTSLIDEA 380

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
               V S   L+  ++  RD+  +G Y  G D +LD+A+   P +  FL+Q   + S   
Sbjct: 381 HYARVRSFKQLLSSYQRNRDLISVGAYARGSDPLLDQAIALYPQLEAFLQQGIFERSDYQ 440

Query: 429 VFQEITKKL 437
                 + L
Sbjct: 441 QSCTALQTL 449


>gi|189017736|gb|ACD71537.1| F1-ATPase alpha subunit [Stenomeris dioscoreifolia]
          Length = 400

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 89/391 (22%), Positives = 158/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + +++    N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSQSETLYCVYVAIGQKRSTVAQLVQNLPEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+  APL    + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFPAPLFGGAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKHRTQTGAGSSTALPVIETQAGDVSAYIPTNVIP 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +D      +++   + +  KQ  
Sbjct: 361 AFAQFGSDLDAATQALLNRGARLTEVPKQPQ 391


>gi|159039542|ref|YP_001538795.1| F0F1 ATP synthase subunit alpha [Salinispora arenicola CNS-205]
 gi|189081312|sp|A8M2J5|ATPA_SALAI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|157918377|gb|ABV99804.1| ATP synthase F1, alpha subunit [Salinispora arenicola CNS-205]
          Length = 550

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 99/455 (21%), Positives = 180/455 (39%), Gaps = 28/455 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  + E +    E Y  +        + G ++        V  L       + +  +   
Sbjct: 4   LTISTEEIRGALERYVSSYTADVSREEVGTVADAGDGIAHVEGL-PSTMTNELLEFEDG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + +++  + +  +G    I  G  V   GR         + GRV+NALG PID
Sbjct: 62  --TLGVALNLDVREIGVVVLGDFGGIEEGQRVKRTGRVLSAPVGDAFLGRVVNALGHPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +   E+  + P  M R+ V++  +TGI+ +D  TP+  GQR  +      GK
Sbjct: 120 GLGDI-ANEGFRELELQAPNVMARKSVDEPLQTGIKAVDAMTPIGRGQRQLIIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVAT 223
                 T+L+        D     + I   VG++   +               + +V + 
Sbjct: 179 TTVALDTILNQRDNWRSGDPKKQVRCIYVAVGQKASTIASIKGVLEEAGAMEYTTIVASP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +    + +AP T  TI +++   G +VL++ D +++ A + R ++      P    YP
Sbjct: 239 ASDPAGFKYLAPYTGSTIGQHWMYGGKHVLVVFDDLSKQAEAYRAVSLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDEMGGGSMTGLPIIETKANDISAFIPTNVISITDGQIFLETD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     KK+  SL   + ++ E         +   +D 
Sbjct: 359 LFNQGVRPAINVGTSVSRVGGAAQVKPMKKVAGSLRLNLAQYRELE---AFAAFASDLDK 415

Query: 402 ILDKAVHQVPIIYDFLKQ-SPSDLSSEDVFQEITK 435
                + +   + + LKQ + S    E+    +  
Sbjct: 416 ASRAQLERGSRLVELLKQPNYSPFPVEEQVVSVWA 450


>gi|108773232|ref|YP_635746.1| CF1 beta subunit of ATP synthase [Chara vulgaris]
 gi|118573519|sp|Q1ACK1|ATPB_CHAVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|77157888|gb|ABA61929.1| CF1 beta subunit of ATP synthase [Chara vulgaris]
          Length = 493

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 115/436 (26%), Positives = 193/436 (44%), Gaps = 27/436 (6%)

Query: 8   LAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNL 59
           +  +  D   +LV +   G I+ I      ++ L  Q   + + +  +GKN+     D  
Sbjct: 1   MTTVNLDLQNSLVAEKNRGKITQIIGPVMDISFLPGQMPNIYNCLTVKGKNASGDFIDVT 60

Query: 60  GQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
            +V ++  D  V    +   + +  G  V   G    +       GR+ N LG+P+D   
Sbjct: 61  CEVQQLLGDNKVRAVAMSATDGLMRGMEVIDTGSPLSVPVGETTLGRIFNVLGEPVDNLG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L
Sbjct: 121 PVDTS-ITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVL 179

Query: 178 LSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDE 226
           +     +       +S+ G   ER RE  +   +               K  +V    +E
Sbjct: 180 IMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNE 239

Query: 227 SPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
            P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  +
Sbjct: 240 PPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPT 299

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           + +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +
Sbjct: 300 LSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAK 357

Query: 346 GRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           G YP VDPL S S +        +  +    +   + R++E +DI  I G     +    
Sbjct: 358 GIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-R 416

Query: 405 KAVHQVPIIYDFLKQS 420
             V +   I  FL Q 
Sbjct: 417 LIVARARKIERFLSQP 432


>gi|25808477|gb|AAN74365.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGASVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|25808443|gb|AAN74348.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 351

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 2   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 62  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 120

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 121 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 180

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 181 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 240

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 241 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 300

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 301 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 351


>gi|186886315|gb|ACC93560.1| ATPase F1 alpha subunit [Juncus arcticus]
          Length = 362

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 92/362 (25%), Positives = 156/362 (43%), Gaps = 18/362 (4%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E      
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQ 357

Query: 392 IG 393
            G
Sbjct: 358 FG 359


>gi|116696307|ref|YP_841883.1| flagellum-specific ATP synthase [Ralstonia eutropha H16]
 gi|113530806|emb|CAJ97153.1| Flagellum-specific ATP synthase [Ralstonia eutropha H16]
          Length = 491

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 158/432 (36%), Positives = 227/432 (52%), Gaps = 25/432 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--------LGDFVVHQGKNSDNLGQVIRINLDIVYI 72
              G ++    +      L   V          G F            +V+    D +Y+
Sbjct: 40  RSCGRLTRAAGLVLEAVGLRLPVGSDCLIELPAGQFTTDSNAPRTAEAEVVGFGADRLYL 99

Query: 73  CPVGIGEEISLGDLVFHW---------------GRFRISPSACWCGRVINALGKPIDGDD 117
            P      +  G  V+                 G  R+   A   GRV++A G+P+DG  
Sbjct: 100 MPQSDVVGLLPGARVYPLEPSPQPAGITTPREPGSKRLPVGAGLLGRVLDAAGRPLDGLG 159

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    + + +  +    + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 160 PITAA-MEVPLAGEQINPLMRAPIETVLDTGVRAINGMLTVGRGQRMGLFAGSGVGKSVL 218

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D +++ L+GERGREV+EFIE+ LG +   +SVVV A +D SP+LR     
Sbjct: 219 LGMMARYTSADVIVVGLIGERGREVKEFIENILGPEGRARSVVVAAPADTSPLLRMQGAA 278

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 279 YATRLAEYFRDQGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPTLVER 338

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS
Sbjct: 339 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDVEAS 398

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR        ++   V     L+ R++  RD+  +G Y PG D  LD A+   P +  F
Sbjct: 399 ISRAMTALIPDEQFGSVRRFKQLMSRYQRNRDLISVGAYVPGNDPELDLAMRLHPRMEAF 458

Query: 417 LKQSPSDLSSED 428
           L+Q   + +  D
Sbjct: 459 LQQDIHERAGYD 470


>gi|304388486|ref|ZP_07370589.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC
           13091]
 gi|304337483|gb|EFM03649.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC
           13091]
          Length = 465

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|170682688|ref|YP_001743304.1| flagellum-specific ATP synthase [Escherichia coli SMS-3-5]
 gi|170520406|gb|ACB18584.1| flagellar protein export ATPase FliI [Escherichia coli SMS-3-5]
          Length = 457

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 239/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+   G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSFGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|156933439|ref|YP_001437355.1| flagellum-specific ATP synthase [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156531693|gb|ABU76519.1| hypothetical protein ESA_01257 [Cronobacter sakazakii ATCC BAA-894]
          Length = 456

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 160/428 (37%), Positives = 237/428 (55%), Gaps = 17/428 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPV 75
           V + G ++  T +    T L   + LG   + + +    L     +V+  N   +++ P+
Sbjct: 25  VRRYGRLTRATGLVLEATGL--QLPLGATCIIERQEGTQLQEVESEVVGFNGQKLFLMPL 82

Query: 76  GIGEEISLGDLVF-HWG-------RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I  G  V+   G         ++       GRV++  GKP+DG  S    + +  
Sbjct: 83  EEVEGILPGARVYARSGGGEGLQSSKQLPLGPQLLGRVLDGAGKPLDGLPS-PDTETTGA 141

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +E     G+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 142 LITPPFNPLQRTAIEDVLDVGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQA 201

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F 
Sbjct: 202 DVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFR 261

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+
Sbjct: 262 DRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGS 321

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR+     S
Sbjct: 322 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRVMTAIIS 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS- 425
            +    V +   L+  F+  RD+  +G Y  G D +LD+A+   P +  FL+Q   + S 
Sbjct: 382 EEHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDRAITLWPQLEAFLQQGIYERSG 441

Query: 426 SEDVFQEI 433
            ED  Q +
Sbjct: 442 VEDALQAL 449


>gi|89899364|ref|YP_521835.1| ATPase FliI/YscN [Rhodoferax ferrireducens T118]
 gi|89344101|gb|ABD68304.1| ATPase FliI/YscN [Rhodoferax ferrireducens T118]
          Length = 471

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 157/437 (35%), Positives = 230/437 (52%), Gaps = 25/437 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +T +    + +   V     V  + + +  L +V+  + D  ++ P G    +S 
Sbjct: 30  GTLTRLTGLVLEASGIRVPVGSQCLVTMKAQ-TPVLAEVVGFSNDRAFLMPAGDVHGLSS 88

Query: 84  GDLV---------------FHWGRF------RISPSACWCGRVINALGKPIDGDDSLGKG 122
           G  V                   R       R+       GRV++A G P+D    +   
Sbjct: 89  GASVEPAAAYVAVPRLGERRQTERISGYATLRLPLGDGLLGRVVDAQGAPMDRRGPIEDV 148

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
             ++ +  +   AM+R  V +   TG+R I+    +  GQRIG+FAGSG+GKS LL M A
Sbjct: 149 -TAVPLDRQPINAMDRAPVRETLDTGVRAINALLTIGRGQRIGLFAGSGVGKSVLLGMMA 207

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D +++ L+GERGREV+EFIED LGD    +SVVV A  D  P+LR      A  I
Sbjct: 208 RYTKADVIVVGLIGERGREVKEFIEDILGDDGRARSVVVAAPGDAPPLLRMQGAAYATAI 267

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP+L+ER G   
Sbjct: 268 AESFRDKGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNGL 327

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE G +P +D   S SR+ 
Sbjct: 328 HGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRALAESGHFPAIDIEQSASRVM 387

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                    ++      +  R+E+ RD+  IG Y  G D  LD+A+     +  FL+Q  
Sbjct: 388 HNVVPQQHFEMARRFRAINSRYEKGRDLVQIGAYVGGSDPALDEAIQLHDDMARFLQQDM 447

Query: 422 SDLSSEDV-FQEITKKL 437
            + S+ D     + K L
Sbjct: 448 LEASTLDASVCAMAKAL 464


>gi|5001603|gb|AAD37048.1|AF092122_1 ATP synthase beta subunit [Eucryphia cordifolia]
          Length = 493

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|329945881|ref|ZP_08293568.1| ATP synthase F1, alpha subunit [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328528329|gb|EGF55307.1| ATP synthase F1, alpha subunit [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 543

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 91/432 (21%), Positives = 174/432 (40%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L + AE Y    V   + G++         V  L   V   + +  +       G  +
Sbjct: 13  SALNEFAESYKPAEVAAEEVGHVVFAADGIAHVEGL-PGVMANELLTFEDG---TAGLAM 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  + I  G +V   G    +     + GRV++ LG+PIDG   +   
Sbjct: 69  NLEERRIGVVVLGSFDGIDEGQVVRRTGEVLSVPVGDAYLGRVVDPLGRPIDGLGEID-A 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M+R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRALELQAPGVMSRKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIALDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           L+  A  +  D     + I    G++G  +             + + +V + + +    +
Sbjct: 188 LNQKAAWETGDPDKQVRCIYVATGQKGSTIASVRAALEERGALEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++P T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLSPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCSKLSDDLGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++   +       +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQVKAMKKVAGTLKITLAQYRSMQ---AFAMFASDLDAATRAQLTR 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GERLMELLKQPQ 436


>gi|301155216|emb|CBW14681.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           parainfluenzae T3T1]
          Length = 457

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR++N LG+PID    +G  + +  I    P    +
Sbjct: 59  GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGDIGAEE-NWAIHRPAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|257852966|gb|ACV71494.1| ATP synthase beta subunit [Marathrum cf. oxycarpum Cachoeirc
           9/1996]
          Length = 495

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + ++ +GK+++  GQ I +  ++        V    
Sbjct: 21  GSITQIIGPVLDVAFSPRQMPNIYNALIVKGKDTN--GQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    L   D +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGKATLGRIFNVLGEPIDNLG-LVDNDTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESKVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPKIVGSEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|229915483|gb|ACQ90827.1| CF1 beta subunit of ATP synthase [Pedinomonas minor]
          Length = 480

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 119/426 (27%), Positives = 192/426 (45%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSD-----NLGQVIRINLDI 69
           S ++ V+ G I+ I      VT  S  +  + + +V QGKN          +V ++  D 
Sbjct: 2   SSSVEVKNGRITQIIGPVVDVTFPSGKLPNIYNALVIQGKNEAGTEICVTCEVQQLLGDN 61

Query: 70  -VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G+   +       GR+ N LG+P+D    +G  D  + 
Sbjct: 62  CVRAVAMSGTDGLMRGLEVVDTGKPLTVPVGKTTLGRIFNVLGEPVDNLGPVGAKDG-LP 120

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 121 IHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 180

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 181 AHGGVSVFGGVGERTREGNDLYMEMKESGVINEGNLGESKVALVYGQMNEPPGARMRVGL 240

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 241 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQE 300

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 301 RI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLD 358

Query: 356 SVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +       D   +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 359 STSTMLQPWIVGDEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIE 417

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 418 RFLSQP 423


>gi|195183511|dbj|BAG66969.1| ATP synthase beta subunit [Isodendrion longifolium]
          Length = 489

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALIVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  ++    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALIYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPKIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119368020|dbj|BAF40513.1| ATP synthase beta subunit [Oldfieldia dactylophylla]
          Length = 489

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 28/421 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           +G  +  I  V   V    +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 12  RGRIVQIIGPVLDVVFPRGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRTV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +      K  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   +
Sbjct: 129 PAFIELDTKLKILETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKKGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPNIVGSDHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|66276255|gb|AAY44142.1| ATP synthase beta subunit [Anisophyllea corneri]
          Length = 486

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 423


>gi|183597137|ref|ZP_02958630.1| hypothetical protein PROSTU_00376 [Providencia stuartii ATCC 25827]
 gi|188023447|gb|EDU61487.1| hypothetical protein PROSTU_00376 [Providencia stuartii ATCC 25827]
          Length = 460

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 183/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GK    L    ++   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVVNGKEKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V +      +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLSRGLEVKNLEHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEE-RWSIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|313904301|ref|ZP_07837679.1| ATP synthase F1, alpha subunit [Eubacterium cellulosolvens 6]
 gi|313470851|gb|EFR66175.1| ATP synthase F1, alpha subunit [Eubacterium cellulosolvens 6]
          Length = 614

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 106/407 (26%), Positives = 178/407 (43%), Gaps = 14/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G + +      T++ LS +   G+ V+         G V  I  D +          
Sbjct: 121 SEVGTVVTAGDGIVTISGLS-HAMYGEIVLFDNG---VKGMVQNIGDDGIGAILFDSEGT 176

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G  V   G+   I  S  + GRVI+ALG PIDG + +   +    I    P  ++RQ
Sbjct: 177 IGEGSRVTGTGKKAGIPVSDEYIGRVIDALGNPIDGGEPINSTEFR-PIEQPAPGIVDRQ 235

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGE 197
            V    +TGI  ID   P+  GQR  +      GK+++      +        I   +G+
Sbjct: 236 PVNVPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAIDTILNQKGKDCYCIYVGIGQ 295

Query: 198 RGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   +   +        ++ ++VV +T+ +   L+ +AP +A ++AE+F  KG +VL++ 
Sbjct: 296 KQSTIASLVNTLRTKGAMEYTIVVSSTASDPAPLQYVAPYSATSLAEHFMHKGKDVLIVY 355

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R ++   G  P    YP  VF    RLLER     +    G+ITA+  + 
Sbjct: 356 DDLSKHAVAYRTLSLLLGRSPGREAYPGDVFYLHSRLLERSSRLSEALGGGSITALPIIE 415

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L  EG+ P V+   SVSR+   A +   KK   
Sbjct: 416 TQDGDVSAYIPTNVISITDGQIFLESDLFFEGQRPAVNVGLSVSRVGGAAQTKAMKKAAG 475

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           SL   + +F E +   +   +   +D      + Q  ++ + LKQ  
Sbjct: 476 SLRIDLAQFREMQ---VFTQFSSDLDEATKNQLKQGSVLMEMLKQPT 519


>gi|110456712|gb|ABG74815.1| ATPase beta subunit [Jasminum subhumile]
          Length = 498

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDTVGQAINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGKEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20146582|gb|AAM12445.1| ATP synthase alpha subunit [Impatiens parviflora]
          Length = 371

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 20/375 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +  D V I   G    I  
Sbjct: 1   GRVVSVEDGIARVYGLNE-MKAGEMVSFA---SGVKGIALNLENDHVGIVVFGSDTAIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLL+R      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLKRAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIHRF 383
            K++  S    + ++
Sbjct: 356 MKQVCGSSKLELAQY 370


>gi|21633429|gb|AAM52189.1| ATP synthase beta subunit [Maripa paniculata]
          Length = 478

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 184/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      VT    +   + + +V QG+++D   +V ++  +  V    +   + +
Sbjct: 12  GRIVQIIGPVLDVTFPPGKMPNIYNALVVQGRDNDXTCEVQQLLGNNRVRAVAMSDTDGL 71

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LG+P+D    +     S  I    P  +    
Sbjct: 72  MRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTNTTSA-IHRSAPAFIQLDT 130

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 131 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 190

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 191 RTREGNDLYMEMKESRVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 250

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 251 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 308

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 309 SIQAVYVPADDLTDPAPATXFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 368

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|25808471|gb|AAN74362.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808495|gb|AAN74374.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YAGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|237705900|ref|ZP_04536381.1| flagellum-specific ATP synthase [Escherichia sp. 3_2_53FAA]
 gi|226900657|gb|EEH86916.1| flagellum-specific ATP synthase [Escherichia sp. 3_2_53FAA]
          Length = 471

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 31  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 88

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 89  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 147

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 148 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 206

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 207 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 266

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 267 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 326

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 327 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 386

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 387 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLESYL 446

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 447 QQGIFERADWEASLQGLERIF 467


>gi|26553512|ref|NP_757446.1| F0F1 ATP synthase subunit alpha [Mycoplasma penetrans HF-2]
 gi|81748104|sp|Q8EWZ0|ATPA_MYCPE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|26453518|dbj|BAC43850.1| ATP synthase subunit alpha [Mycoplasma penetrans HF-2]
          Length = 513

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 114/438 (26%), Positives = 193/438 (44%), Gaps = 19/438 (4%)

Query: 1   MQKNLETLA-----QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  NL+  +     Q+ E  +K L  + G + ++       + LS  V L + V+ +  +
Sbjct: 1   MSINLDKFSNIIKNQIKEYQNKALYSEIGRVINVGDGIVQASGLS-NVMLNELVLFENGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
               G  + +      I  +G  E+I  G +V        +       GRVI+A+G PID
Sbjct: 60  ---YGMTLNLEATTCGIVMLGKFEDIKEGSIVKRTKNVVDVPVGDGLLGRVIDAMGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G+  + K D  M I    P  M R  V +  +TG   ID   P+  GQR  +      GK
Sbjct: 117 GNGEI-KYDKKMPIEKIAPGVMARASVCEPLETGTLAIDSMFPIGKGQRELIIGDKQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           +T+      +      K I   +G++   + +FI        L+ + +V +++ + P L 
Sbjct: 176 TTIAIDAIINQKGKNVKCIYVFIGQKNSTIVQFINTLKQFGALEYTTIVASSASDLPSLN 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T +TIAE + SKG++VL+I D +++ A + R ++      P    YP  +F    
Sbjct: 236 YLAPFTGITIAEEWMSKGEDVLIIYDDLSKHAIAYRTLSLLLRRPPGREAYPGDIFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER G   KE   G+ITA+  +  +  + +  I  +V SI DG + +  +L   G+ P
Sbjct: 296 RLLERSGKINKENGGGSITALPIIETEAGDISAYIPTNVISITDGQLFMLTNLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     KK   SL   + ++ E         +   +D    + +  
Sbjct: 356 AIDAGLSVSRVGSSAQINAVKKTSGSLKLELAQYRELD---AFSQFGSDLDKETKEVLEH 412

Query: 410 VPIIYDFLKQSPSDLSSE 427
              +   +KQ  +   S+
Sbjct: 413 GKKVMKLIKQDKNTPFSQ 430


>gi|323144391|ref|ZP_08078999.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066]
 gi|322415844|gb|EFY06570.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066]
          Length = 472

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 113/419 (26%), Positives = 190/419 (45%), Gaps = 18/419 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI----VYICPVGIG 78
           G I  I      V      +  + D +  +G   +    ++ +   I    V    +G  
Sbjct: 13  GTIVQIIGAVVDVEFPETNIPEIHDALEVKGDGKNRPDLILEVQQQIGGGLVRCIAMGSS 72

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G    + G   ++       GR++N LG+P+D    + + +    I  + P    
Sbjct: 73  DGLSRGLTAVNTGDGIKVPVGKETLGRIMNVLGQPVDEAGPINEKE-RWVIHREAPTYAE 131

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + 
Sbjct: 132 QSSTTEVLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIATAHSGLSVFTG 191

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +      + K  ++    +E P  R    LT +T+AE F  +G +VL
Sbjct: 192 VGERTREGNDFYHEMQEAKVIDKVSMIYGQMNEPPGNRLRVALTGLTVAEKFRDEGLDVL 251

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI     +KG+IT+V +V
Sbjct: 252 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIA--STKKGSITSVQAV 309

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD  IVL+R +A  G YP VDPL S SR  D      D  ++
Sbjct: 310 YVPADDLTDPSPATTFAHLDATIVLSRQIASLGIYPAVDPLDSTSRQLDPSIVGKDHYEV 369

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
              +  ++ R++E +DI  I G     +      V +   I  FL Q     S  +VF 
Sbjct: 370 ARGVQTVLQRYKELKDIIAILGMDELSEED-KLTVARARKIERFLSQP---FSVAEVFT 424


>gi|299135452|ref|ZP_07028642.1| ATP synthase F1, beta subunit [Afipia sp. 1NLS2]
 gi|298589860|gb|EFI50065.1| ATP synthase F1, beta subunit [Afipia sp. 1NLS2]
          Length = 476

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 186/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  + + +  + +V   +    V    +   E 
Sbjct: 7   QVGRITQVIGAVVDVQFDGYLPAILNAIETKNQGNRLVLEVAQHLGESTVRAIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   ++       GR+IN +G+P+D    + K + +  I  + P    + 
Sbjct: 67  LVRGQEVTDTGAPIKVPVGEGTLGRIINVIGEPVDEGGPV-KAEGTRAIHQEAPAYTEQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TDAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +TIAE F  K
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTIAEDFRDK 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ ++ V  D+  DP   +  + LD    LNRS+AE+G YP VDPL S SR+       D
Sbjct: 304 SIQAIYVPADDLTDPAPATSFAHLDATTTLNRSIAEKGIYPAVDPLDSTSRMLSPLVVGD 363

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 EHYAVARQVQQILQRYKALQDIIAILGMDELSEDD-KVTVARARKIERFLSQP 415


>gi|57868954|gb|AAW57473.1| ATP synthase beta subunit [Symplocos zizyphoides]
          Length = 486

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|148975564|ref|ZP_01812435.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
 gi|145964992|gb|EDK30243.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
          Length = 461

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 190/411 (46%), Gaps = 17/411 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQ-YVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G I  +      V         + D +      + +L  V+     +  +IV    +
Sbjct: 1   MSVGKIVKVIGAVVDVEFSGNNSPRVYDVLKVTSDEASSL--VLEVQQQLGGNIVRCIAM 58

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID    +G+ + + EI  + P 
Sbjct: 59  GTSDGLRRGLTVENTGSPITVPVGEETLGRIMNVLGQPIDECGEIGQKE-NYEIHREAPS 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         +
Sbjct: 118 YEEKANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 178 FTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGR 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++
Sbjct: 238 DVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSI 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      + 
Sbjct: 296 QAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLIVGQEH 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   + R++E +DI  I G          + V +   I  FL Q 
Sbjct: 356 YDIAQTVQTTLQRYKELKDIIAILGMDELSTED-KQVVSRARKIERFLTQP 405


>gi|289628231|ref|ZP_06461185.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|330870058|gb|EGH04767.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 459

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  Q      L    ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRASVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMGSTE 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 61  GLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEE-RWGIHRPAPSFAEQ 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 298 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V++   I  FL Q 
Sbjct: 358 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVNRARKIQRFLSQP 403


>gi|197288464|gb|ACH57438.1| AtpA [Vibrio gallaecicus]
          Length = 426

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 182/428 (42%), Gaps = 27/428 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I S++    ++  L+  V  G+ +   G         + +N D V    +G   ++  
Sbjct: 1   GTIVSVSDGILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQE 56

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   GR   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V+
Sbjct: 57  GMKVTGTGRILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVD 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGR 200
           +  +TG + +D   P+  GQR  V      GK+ +   ++  + D     I   +G++  
Sbjct: 116 QPVQTGYKSVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKAS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +           +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +
Sbjct: 176 TIANVVRKLEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGN 306
           ++ A + R+I+      P    +P  VF    RLLER     +             + G+
Sbjct: 236 SKQAVAYRQISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGS 295

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +TA+  +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +
Sbjct: 296 LTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQT 355

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              KKL   +   + ++ E   +     +   +D    K +     + + +KQ     + 
Sbjct: 356 KIIKKLSGGIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAP 410

Query: 427 EDVFQEIT 434
             VF +  
Sbjct: 411 MSVFDQAL 418


>gi|121635590|ref|YP_975835.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis FAM18]
 gi|161869279|ref|YP_001598446.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis 053442]
 gi|166201721|sp|A1KW11|ATPB_NEIMF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081336|sp|A9M123|ATPB_NEIM0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120867296|emb|CAM11067.1| ATP synthase beta chain [Neisseria meningitidis FAM18]
 gi|161594832|gb|ABX72492.1| ATP synthase beta chain [Neisseria meningitidis 053442]
 gi|254670875|emb|CBA07378.1| ATP synthase beta chain [Neisseria meningitidis alpha153]
 gi|254672595|emb|CBA06293.1| ATP synthase beta chain [Neisseria meningitidis alpha275]
 gi|261393264|emb|CAX50890.1| ATP synthase beta chain [Neisseria meningitidis 8013]
 gi|319409757|emb|CBY90063.1| ATP synthase beta chain [Neisseria meningitidis WUE 2594]
 gi|325127449|gb|EGC50379.1| ATP synthase F1, beta subunit [Neisseria meningitidis N1568]
 gi|325131657|gb|EGC54363.1| ATP synthase F1, beta subunit [Neisseria meningitidis M6190]
 gi|325133395|gb|EGC56059.1| ATP synthase F1, beta subunit [Neisseria meningitidis M13399]
 gi|325137520|gb|EGC60103.1| ATP synthase F1, beta subunit [Neisseria meningitidis ES14902]
 gi|325141528|gb|EGC63998.1| ATP synthase F1, beta subunit [Neisseria meningitidis 961-5945]
 gi|325143645|gb|EGC65964.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240013]
 gi|325199025|gb|ADY94481.1| ATP synthase F1, beta subunit [Neisseria meningitidis G2136]
 gi|325204886|gb|ADZ00340.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240355]
 gi|325206841|gb|ADZ02294.1| ATP synthase F1, beta subunit [Neisseria meningitidis M04-240196]
          Length = 465

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|89574469|gb|ABD76365.1| putative ATP synthase beta subunit [Acyrthosiphon pisum]
          Length = 521

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 191/414 (46%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V    +   + + +  Q ++   + +V   +  + V    +   E
Sbjct: 52  TSQGRIVAVIGAVVDVQFDEELPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTE 111

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI   A   GR+IN +G+PID    +   D +  I ++ PP +  
Sbjct: 112 GLVRGQEVLDCGSPIRIPVGAETLGRIINVIGEPIDERGPID-TDKTAPIHAEAPPFVEM 170

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 171 SVEQEILVTGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 230

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 231 GERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 290

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  + K  G+I
Sbjct: 291 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTSK--GSI 348

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 349 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIG 408

Query: 368 DEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           DE   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 409 DEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 461


>gi|4995846|emb|CAB44284.1| H(+)-transporting ATP synthase [Theobroma cacao]
          Length = 488

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|24940270|emb|CAD43391.1| ATP synthase beta subunit [Wigandia caracasana]
          Length = 486

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKTGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|25808411|gb|AAN74332.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 157/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF   G + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHGRHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|127514770|ref|YP_001095967.1| F0F1 ATP synthase subunit beta [Shewanella loihica PV-4]
 gi|190358704|sp|A3QJR0|ATPB_SHELP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|126640065|gb|ABO25708.1| ATP synthase F1, beta subunit [Shewanella loihica PV-4]
          Length = 458

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 189/410 (46%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G +  +      V      V      V+      + G V+     +   +V    +G
Sbjct: 1   MSTGTVVQVIGAVVDVEFPHDAVPQ----VYDALEIKSEGLVLEVQQQLGGGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +   +   GR++N LG+P+D    +G+ D    I  + P  
Sbjct: 57  SSDGLRRGIEVVNTGSPITVPVGSATLGRIMNVLGQPVDEAGPIGE-DERYVIHREAPSY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 116 EDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYYEMEESGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + S + +++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 354 DVASGVQNVLQRYKELKDIIAILGMDELSDED-KTTVARARKIEKYLSQP 402


>gi|296327996|ref|ZP_06870531.1| ATP synthase F1 sector beta subunit [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154952|gb|EFG95734.1| ATP synthase F1 sector beta subunit [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 462

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 112/405 (27%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ I S    V    +   + + +  + ++ + + +V   +  ++V    +   + + 
Sbjct: 4   GTITQIISAVVDVAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLK 63

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   I       GR++N LG+P+D    L   +  + I  + P   + +  
Sbjct: 64  RGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLN-AETFLPIHREAPEFDDLETE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+   +      + K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 183 TREGRDLYGEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R++A  G YP VDPL S S+ L++     +  ++   
Sbjct: 301 ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 361 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIERFFSQP 404


>gi|227355983|ref|ZP_03840375.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
 gi|227163971|gb|EEI48873.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
          Length = 457

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 160/446 (35%), Positives = 233/446 (52%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE LA      +K   + Q G ++  T +      L   + LG   + +      + +V 
Sbjct: 9   LEKLADAESRLNKIPRIRQYGRLTRATGLVMEAKGL--VMPLGSTCLIERTIGKTVEEVE 66

Query: 64  ----RINLDIVYICPVGIGEEISLGDLVF------HWGRFR-ISPSACWCGRVINALGKP 112
                 N   + + P+   E ++ G  V+        G  R +       GRV++  G P
Sbjct: 67  SEVVGFNGSQMLLMPLQEVEGLTPGARVYAQSIPGREGEGRQLPLGDALLGRVLDGSGDP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG            +++     + R  +      G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPP-PDTSYRAPLITPPINPLQRTPITDVLDVGVRAINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVVV A +D SP+LR
Sbjct: 186 GKSVLLGMMARFTQADVIVVGLIGERGREVKDFIENILGKEGLARSVVVAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +
Sbjct: 306 ALVERAGNGVDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR           + V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDKTHYRRVQVFKQLLSSYQRNRDLINVGAYAAGSDPMLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   +  S     E   +L
Sbjct: 426 SLAKFLQQDIQEQCSYQHACEQLNQL 451


>gi|150006928|ref|YP_001301671.1| F0F1 ATP synthase subunit alpha [Parabacteroides distasonis ATCC
           8503]
 gi|262384329|ref|ZP_06077464.1| ATP synthase F1, alpha subunit [Bacteroides sp. 2_1_33B]
 gi|298377353|ref|ZP_06987306.1| ATP synthase F1, alpha subunit [Bacteroides sp. 3_1_19]
 gi|158513747|sp|A6L8N5|ATPA_PARD8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149935352|gb|ABR42049.1| ATP synthase alpha chain [Parabacteroides distasonis ATCC 8503]
 gi|262294032|gb|EEY81965.1| ATP synthase F1, alpha subunit [Bacteroides sp. 2_1_33B]
 gi|298265767|gb|EFI07427.1| ATP synthase F1, alpha subunit [Bacteroides sp. 3_1_19]
          Length = 525

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/446 (22%), Positives = 171/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E    ++ ++  G +  ++     +  L       + +            V+ 
Sbjct: 12  SILRQQLEGIHTSIKLEEVGTVLQVSDGVARIYGL-DNAEANELLQFDNGME---AIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  GD V   GR   I  S    GRVI+ LG PIDG   +    
Sbjct: 68  LEEDNVGAVLLGPTDQIKEGDTVKRTGRIASIDVSEGMIGRVIDPLGNPIDGKGEILGET 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK      T++
Sbjct: 128 CEMPLERKAPGVIFRQPVNEPLQTGIKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +  +  +  +    I   +G++G  V   +           ++VV AT+ +   ++  AP
Sbjct: 188 NQRSNYEAGNPVYCIYVAIGQKGSTVAALVNTLQEKGAMDYTIVVSATASDPAAMQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDSGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQPEVAREMNDLPESMRDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     +F E       GG 
Sbjct: 368 IFLETDLFNQGNRPAINVGISVSRVGGNAQLKAMKKVAGTLKIDQAQFRELESFSKFGGE 427

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +    + +       L Q  
Sbjct: 428 ---MDAVTAFTIDKGQKNTQLLIQPQ 450


>gi|56675513|emb|CAB44208.2| H(+)-transporting ATP synthase [Keraudrenia hermanniifolia]
          Length = 487

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G IS I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQQINVTCEVQQLLGNNRVRAV 68

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 69  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHKPA 127

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 128 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 187

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 188 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTM 247

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 248 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 305

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 306 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 366 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 424

Query: 420 S 420
            
Sbjct: 425 P 425


>gi|153833268|ref|ZP_01985935.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
 gi|156977318|ref|YP_001448224.1| F0F1 ATP synthase subunit beta [Vibrio harveyi ATCC BAA-1116]
 gi|269961117|ref|ZP_06175485.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
 gi|190358281|sp|A7N6Q5|ATPB2_VIBHB RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|148870404|gb|EDL69325.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
 gi|156528912|gb|ABU73997.1| hypothetical protein VIBHAR_06104 [Vibrio harveyi ATCC BAA-1116]
 gi|269834068|gb|EEZ88159.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
          Length = 461

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 15/407 (3%)

Query: 24  GYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGE 79
           G I  +      V         V      ++ G +   + +V + +   +V    +G  +
Sbjct: 4   GKIVKVIGAVVDVEFEQGKGPKV-YDALKINDGSDGSLMLEVQQQLGGGVVRCIAMGSSD 62

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR++N LG PID    +G+  +S EI    P    +
Sbjct: 63  GLKRGLEVESTGNPITVPVGEETLGRIMNVLGHPIDECGPIGE-QVSYEIHRDAPSYEEQ 121

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + V
Sbjct: 122 SNSTALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGV 181

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +     +  K  +V    +E P  R    LT +TIAE F  +G +VLL
Sbjct: 182 GERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLL 241

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 242 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVY 299

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   + 
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPQVVGQEHYDVA 359

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 360 RKVQQTLQRYKELKDIIAILGMDELSEED-KRLVSRARKVERFLTQP 405


>gi|94986847|ref|YP_594780.1| F0F1 ATP synthase subunit beta [Lawsonia intracellularis
           PHE/MN1-00]
 gi|118573693|sp|Q1MRB8|ATPB_LAWIP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|94731096|emb|CAJ54458.1| proton ATPase beta subunit [Lawsonia intracellularis PHE/MN1-00]
          Length = 471

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/424 (27%), Positives = 192/424 (45%), Gaps = 20/424 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS----DNLGQV-IRINLDIVYICPVGI 77
           G I  +      V+    +   +   +     NS      + +V   +  DIV    +  
Sbjct: 6   GKIVQVIGAVVDVSFPNGKLPPILTALEIHNPNSIDAPKLICEVAQHLGDDIVRTIAMDA 65

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G            GR++N +G+PIDG   +      + I  K P  +
Sbjct: 66  TEGLKRGMDVLDTGHPIMAPVGKASLGRIMNVVGQPIDGLGVID-TKTYLPIHRKPPSFL 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+VID+  P   G ++G+F G+G+GK+ +L     +         + +
Sbjct: 125 DQNTSVEPLETGIKVIDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIARQHGGISVFA 184

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +     + +K+++V    +E P  R    LTA+T AEYF  +   +
Sbjct: 185 GVGERTREGNDLYHEMKEAGVLEKAILVYGQMNEPPGARSRVALTALTCAEYFRDEEHQD 244

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +    G+IT+V 
Sbjct: 245 VLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLGTDLGSLEERI--TSTHNGSITSVQ 302

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEK 370
           +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ +      +  
Sbjct: 303 AVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILEPNFVGEEHY 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
            +   +  ++ +++E +DI  I G     D      V +   I  FL Q        + F
Sbjct: 363 TVARGVQKILQKYKELQDIIAILGMDELSDED-KLVVSRARRIQRFLSQP---FHVAETF 418

Query: 431 QEIT 434
               
Sbjct: 419 TGTA 422


>gi|6687379|emb|CAB64927.1| ATP synthase beta subunit [Decumaria barbara]
          Length = 498

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|320539769|ref|ZP_08039430.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia
           symbiotica str. Tucson]
 gi|320030172|gb|EFW12190.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia
           symbiotica str. Tucson]
          Length = 460

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 188/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVENDTDKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG+PID    +G+G+    I    P    
Sbjct: 61  DGLRRGLKVNNLEHPIEVPVGKATLGRIMNVLGEPIDMKGHIGEGE-RWAIHRPAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|171057706|ref|YP_001790055.1| flagellar protein export ATPase FliI [Leptothrix cholodnii SP-6]
 gi|170775151|gb|ACB33290.1| flagellar protein export ATPase FliI [Leptothrix cholodnii SP-6]
          Length = 466

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 154/438 (35%), Positives = 224/438 (51%), Gaps = 29/438 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G +  ++ +      +   + +G     Q      +  +V+    D  Y+ P G  + + 
Sbjct: 29  GTLVRVSGLVLEAAGI--RMPVGSLCEVQMAGQPPVPAEVVGFAGDRAYLMPTGEVQGLV 86

Query: 83  LGDLVFHWGRFR---------------------ISPSACWCGRVINALGKPIDGDDSLGK 121
            G  V                            +       GRV++A G+P+D    L  
Sbjct: 87  SGATVVPLETPVQAPVLGRTAHPWRRNEDRSRHLPVGDGLLGRVVDANGEPMDRLGPLQD 146

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +  +   AM+R  V     TG+R I+    +  GQR+G+FAG+G+GKS LL M 
Sbjct: 147 V-HPQPLARRPINAMDRDPVRTPLDTGVRSINALLTVGRGQRLGLFAGTGVGKSVLLGMM 205

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D +++ L+GERGREV+EFIED LG+    +SVVV A +D  P+ R      A  
Sbjct: 206 ARYTEADVIVVGLIGERGREVKEFIEDILGEEGRARSVVVAAPADSPPLTRMQGATYATA 265

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEYF  +G +VLL++DS+TRFA + REIA   GE P  +GYP S F++LP+L+ER G  
Sbjct: 266 IAEYFRDQGRHVLLLMDSLTRFAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNG 325

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +K +G+ITA  +VL +GD+  DPIAD+ R ILDGHIVL+R LAE G YP +D   S+SR+
Sbjct: 326 QKGQGSITAFYTVLSEGDDQQDPIADAARGILDGHIVLSRELAESGHYPAIDIEKSISRV 385

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                + +  +    +  L+ R  + RD+  +G Y PG D  LD AV   P I   L+Q 
Sbjct: 386 MTSVAAREHIEAARRMRQLLSRVNKARDLIQLGAYAPGHDAELDAAVRAQPAIVALLQQ- 444

Query: 421 PSDLSSEDVFQEITKKLQ 438
             D  S     +    L+
Sbjct: 445 --DTWSCAPLADSVAALR 460


>gi|75328438|sp|Q85V35|ATPB_LACPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351913|emb|CAD48109.1| ATP synthase beta subunit [Lachenalia pusilla]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V  L +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPLGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|53728944|ref|ZP_00134548.2| COG0055: F0F1-type ATP synthase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209110|ref|YP_001054335.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           L20]
 gi|190150977|ref|YP_001969502.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|303249889|ref|ZP_07336091.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307246571|ref|ZP_07528642.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307250941|ref|ZP_07532867.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307255556|ref|ZP_07537361.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307260007|ref|ZP_07541719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307262135|ref|ZP_07543786.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|322513163|ref|ZP_08066294.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC
           25976]
 gi|166201686|sp|A3N2U4|ATPB_ACTP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739968|sp|B3H2P3|ATPB_ACTP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|126097902|gb|ABN74730.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|189916108|gb|ACE62360.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|302650952|gb|EFL81106.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306852443|gb|EFM84677.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306856969|gb|EFM89099.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306861405|gb|EFM93394.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306865843|gb|EFM97719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868112|gb|EFM99937.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|322121059|gb|EFX92883.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC
           25976]
          Length = 457

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGLVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR++N LG+PID    +G+ +   +I    P    +
Sbjct: 59  GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|281190731|ref|YP_003330968.1| ATP synthase CF1 beta subunit [Parthenium argentatum]
 gi|269924844|gb|ACZ52717.1| ATP synthase CF1 beta subunit [Parthenium argentatum]
          Length = 498

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQSINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDNS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|253582462|ref|ZP_04859684.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
 gi|251835607|gb|EES64146.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725]
          Length = 466

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEIS 82
           G I+ I S    V+   Q   + + +  +  + + + +V +   + V     +   + + 
Sbjct: 5   GTITQIISAVVDVSFKDQLPSIYNALKVKVGDKELVLEVQQHLGNNVIRAVAMDSTDGLQ 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR++N LG+P+D    +   +  + I    P    ++  
Sbjct: 65  RGMEVIDTGSPIKVPVGKAVLGRILNVLGQPVDDGGPIETEEF-LPIHRDAPSFEEQETE 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 124 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGER 183

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+  ++     +  K+ +V    +E P  R    LT +TIAE F  K   +VLL +
Sbjct: 184 TREGRDLYDEMTESGVLSKTSLVYGQMNEPPGARLRVGLTGLTIAENFRDKEGQDVLLFI 243

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 244 DNIFRFTQAGSEVSALLGRMPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVP 301

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R++A  G YP VDPL S S+         +  ++   
Sbjct: 302 ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSAEIVGKEHYEVARE 361

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 362 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIQRFFSQP 405


>gi|30351915|emb|CAD48110.1| ATP synthase beta subunit [Periboea paucifolia]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V  L +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPLGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|302185362|ref|ZP_07262035.1| FliI/YscN family ATPase [Pseudomonas syringae pv. syringae 642]
          Length = 454

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 150/430 (34%), Positives = 229/430 (53%), Gaps = 15/430 (3%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICP 74
           S + VV  G +S++  +     C    V +GD   V++      L +++    D   +  
Sbjct: 24  SLSPVVVSGRVSAVNGILL--ECQVPAVRIGDLCRVYKTGGESMLAEIVGFTEDCALLSA 81

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS-----LGKGDLSMEI 128
           +G  E I  G  +   G    +S      G V++  G+ +DG         G+   +  +
Sbjct: 82  LGTPEGIEQGARIEPLGVSHSVSVDDSLLGSVLDGFGRRLDGQGDGAFALPGEHRPTQPV 141

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
           +    P   R R+     TG+R ID    L  GQR+G+FAG+G GK+TLL+  AR+   D
Sbjct: 142 ICDAIPPTQRPRIADAMPTGLRAIDAAITLGEGQRVGLFAGAGCGKTTLLAELARNMPCD 201

Query: 189 KVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            ++  L+GERGRE+REF+  +   +   +SV+V ATSD S + R  A  T   IAE +  
Sbjct: 202 VIVFGLIGERGRELREFLDHELDDELRARSVLVCATSDRSSMERARAAFTTTAIAEAYRQ 261

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G  VLL++DS+TRFA + REI   +GE     G P SV++ LPRL+ER G SE  +G+I
Sbjct: 262 SGKRVLLLIDSLTRFARAQREIGIAAGEPLGRGGLPPSVYTLLPRLVERAGRSE--QGSI 319

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+ +VL++ D+ NDP+AD VRS++DGHIV++R LAE G YP +D  AS+SR+       
Sbjct: 320 TAIYTVLIEQDSMNDPVADEVRSLIDGHIVMSRKLAERGHYPAIDVQASLSRITSSVTDR 379

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             ++   +L  L+  +++   +  +G Y PG D + D AV     I  FL+Q   +L   
Sbjct: 380 QHQRGNVTLRRLLAAYQQVEMLLRLGEYTPGNDTMTDCAVQLHEQINGFLQQ---ELREP 436

Query: 428 DVFQEITKKL 437
              Q+   +L
Sbjct: 437 QALQDTLHQL 446


>gi|56675897|emb|CAB90024.2| ATP synthase beta subunit [Bouvardia ternifolia]
          Length = 490

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + D +V +GK  D +GQ I +  ++        V    
Sbjct: 12  GRIVQIIGPVLDVAFPPGKMPNIYDALVVKGK--DTVGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIGTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTAPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 425


>gi|30351911|emb|CAD48108.1| ATP synthase beta subunit [Massonia depressa]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V  L +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPLGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|124383817|ref|YP_001027567.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10229]
 gi|167582834|ref|ZP_02375708.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis TXDOH]
 gi|167620974|ref|ZP_02389605.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis Bt4]
 gi|167721822|ref|ZP_02405058.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei DM98]
 gi|167740794|ref|ZP_02413568.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 14]
 gi|167818009|ref|ZP_02449689.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 91]
 gi|167826372|ref|ZP_02457843.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 9]
 gi|167847891|ref|ZP_02473399.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei B7210]
 gi|167896448|ref|ZP_02483850.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 7894]
 gi|167904850|ref|ZP_02492055.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei NCTC
           13177]
 gi|167913128|ref|ZP_02500219.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 112]
 gi|167921065|ref|ZP_02508156.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BCC215]
 gi|254206873|ref|ZP_04913224.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
 gi|254357427|ref|ZP_04973701.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
 gi|190358265|sp|A2S6J8|ATPB_BURM9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|124291837|gb|ABN01106.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10229]
 gi|147752415|gb|EDK59481.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU]
 gi|148026491|gb|EDK84576.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280]
          Length = 459

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 188/406 (46%), Gaps = 11/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V+G  +  I +V            + D ++ +G       Q  ++   +V    +G  + 
Sbjct: 2   VEGKIVQCIGAVIDVEFPRESMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICLGASDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG+PID    + + +    I  K P      
Sbjct: 61  LRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL  
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V
Sbjct: 240 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      +   +  
Sbjct: 298 PADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 RVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 402


>gi|226371|prf||1508208B ATPase beta
          Length = 460

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   +V    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNESLVLEVQQQLGGGVVRAIAMGSS 60

Query: 79  EEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPTEVPVGKAILGRIMNVLGEPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|170744668|ref|YP_001773323.1| F0F1 ATP synthase subunit beta [Methylobacterium sp. 4-46]
 gi|168198942|gb|ACA20889.1| ATP synthase F1, beta subunit [Methylobacterium sp. 4-46]
          Length = 484

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/432 (25%), Positives = 190/432 (43%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G+I+ +      V        + + +  + + +  + +V +++    V    +   E + 
Sbjct: 15  GHITQVIGAVVDVQFEGHLPEILNALETKNQGNRLVLEVAMQLGESTVRCIAMDTSEGLV 74

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++   A   GR++N +G+PID   ++        I    P    +   
Sbjct: 75  RGQEVIDTGAPIKVPVGANTLGRIMNVIGEPIDEAGAIEAQSFRA-IHQPAPSYAEQSTE 133

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 134 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAGVGER 193

Query: 199 GREVREFIEDYLG------------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            RE  +   + +                 K  +V    +E P  R    LT +T+AE+F 
Sbjct: 194 TREGNDLYHEMIESKVNMDPKEHGSAEGSKCALVYGQMNEPPGARARVALTGLTVAEHFR 253

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+
Sbjct: 254 DEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGS 311

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+      
Sbjct: 312 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPTIL 371

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +       +  ++ R++  +DI  I G     +      V +   I  FL Q      
Sbjct: 372 GEEHYATARRVQQVLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP---FH 427

Query: 426 SEDVFQEITKKL 437
             +VF     KL
Sbjct: 428 VAEVFTGSPGKL 439


>gi|254302779|ref|ZP_04970137.1| F-type two-sector ATPase, F(1) beta subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322971|gb|EDK88221.1| F-type two-sector ATPase, F(1) beta subunit [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 462

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/405 (27%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ I S    V    +   + + +  + ++ + + +V   +  ++V    +   + + 
Sbjct: 4   GTITQIISAVVDVAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLK 63

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   +       GR++N LG+P+D    +   +  + I  + P   + +  
Sbjct: 64  RGMEVIDTGKPITVPVGKAVLGRILNVLGEPVDNQGPIN-AETFLPIHREAPEFDDLETE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+   +      + K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 183 TREGRDLYGEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R++A  G YP VDPL S S+ L++     +  ++   
Sbjct: 301 ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 361 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIERFFSQP 404


>gi|332533718|ref|ZP_08409577.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036882|gb|EGI73343.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505]
          Length = 461

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 15/407 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIGE 79
           G +  I      +      V    +   +  + D  G  +     +   +V    +G  +
Sbjct: 4   GKVVQIIGAVVDIEFPQDSVPAV-YHALRVTDGDLAGLTLEVQQQLGGGVVRTIAMGTTD 62

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +    LV + G   ++       GR++N LG+PID    +G+ D  M I    P    +
Sbjct: 63  GLRRSALVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMSIHRAAPSYEEQ 121

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 122 SSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 181

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 182 GERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 241

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT++ +V 
Sbjct: 242 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSIQAVY 299

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 300 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQVIGQEHYDTA 359

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 360 RGVQTVLQRYKELKDIIAILGMDELSDED-KQLVSRARKIQRFLSQP 405


>gi|183602786|ref|ZP_02964149.1| F0F1 ATP synthase subunit alpha [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683118|ref|YP_002469501.1| ATP synthase subunit alpha [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241191447|ref|YP_002968841.1| F0F1 ATP synthase subunit alpha [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196853|ref|YP_002970408.1| F0F1 ATP synthase subunit alpha [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|254807678|sp|B8DWS4|ATPA_BIFA0 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|183218024|gb|EDT88672.1| F0F1 ATP synthase subunit alpha [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219620768|gb|ACL28925.1| ATP synthase F1, alpha subunit [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249839|gb|ACS46779.1| F0F1 ATP synthase subunit alpha [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251407|gb|ACS48346.1| F0F1 ATP synthase subunit alpha [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295794440|gb|ADG33975.1| F0F1 ATP synthase subunit alpha [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 546

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 182/439 (41%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y+ +     + G++++       VT L       + +  +      LG   
Sbjct: 13  KALDDFVEAYTPSETPTQEVGHVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG+PIDG   + K 
Sbjct: 69  NLDAREIGVVILGDFVGIEEGQEVRRTGEVLSVPVGDGFLGRVVDPLGRPIDGMGEI-KS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDQPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 188 INQKKNWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEEAGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKDVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 308 RLLERCARVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + R+       +   +   +D      +++
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLARYRSLESFAM---FASDLDAASKAQLNR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GARLTELLKQPQFSPYSME 443


>gi|21633399|gb|AAM52174.1| ATP synthase beta subunit [Itzaea sericea]
          Length = 490

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   +D   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPKIYNALVVQGRDKEQTDVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLKRGMQVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|73543028|ref|YP_297548.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha JMP134]
 gi|118573728|sp|Q46VY0|ATPB_RALEJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|72120441|gb|AAZ62704.1| ATP synthase F1, beta subunit [Ralstonia eutropha JMP134]
          Length = 467

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V +      +       GR+++ LG+PID    +   D
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMAVKNTEAPISVPVGQGTLGRIMDVLGRPIDEAGPI-ASD 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 ERRAIHQKAPKFDELSPSTDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    L+ +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALSGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTLVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +  ++   + R++E RDI  I G           AV++   I  FL 
Sbjct: 350 QMDPQVVGQEHYNVARAVQQTLQRYKELRDIIAILGMDELS-PEDKMAVNRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|25808403|gb|AAN74328.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808429|gb|AAN74341.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 1   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 61  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 119

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 120 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 179

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 180 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 239

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 240 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 299

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 300 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 350


>gi|169260965|gb|ACA52084.1| ATP synthase beta subunit [Isoetes sp. Rai 1005]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 117/441 (26%), Positives = 193/441 (43%), Gaps = 30/441 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           M+KN      LA   S  +    G+I+ I   V   V    +   + +  + +G+N    
Sbjct: 1   MKKNP-----LALGVSALVDRNVGHITQIIGPVLDVVFPPGKMPNIYNPSIVKGRNPAGQ 55

Query: 57  --DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKP 112
                 +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG+P
Sbjct: 56  EISVTCEVQQLLGNNKVRTVAMSATDGLTRGMEVIDTGAPLSVPVGEATLGRIFNVLGEP 115

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +D   S+     +  I    P           F+TGI+V+D+  P   G +IG+F G+G+
Sbjct: 116 VDNSGSVDAS-TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGV 174

Query: 173 GKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVV 221
           GK+ L+     +         + + VGER RE  +   +               K  +V 
Sbjct: 175 GKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVINEQNISESKVALVY 234

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A 
Sbjct: 235 GQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAV 294

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R
Sbjct: 295 GYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPVTTFAHLDATTVLSR 352

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            LA +G YP VDPL S S +       +   +    +   + R++E +DI  I G     
Sbjct: 353 GLAAKGIYPAVDPLDSTSTMLQPWIVGEQHYETAQGVKQTLQRYKELQDIIAILGLDELS 412

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 413 EED-RLTVARARKIERFLSQP 432


>gi|223041784|ref|ZP_03611975.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202]
 gi|240950011|ref|ZP_04754319.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305]
 gi|223017410|gb|EEF15830.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202]
 gi|240295489|gb|EER46232.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305]
          Length = 457

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVETGLTLEVQQQLG--GGLVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR++N LG+PID    +G+ +   +I    P    +
Sbjct: 59  GLKRGLKVENTGNPIQVPVGTQTLGRIMNVLGEPIDEKGPIGEEE-RWDIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|91211159|ref|YP_541145.1| flagellum-specific ATP synthase [Escherichia coli UTI89]
 gi|117624081|ref|YP_852994.1| flagellum-specific ATP synthase [Escherichia coli APEC O1]
 gi|218558798|ref|YP_002391711.1| flagellum-specific ATP synthase [Escherichia coli S88]
 gi|91072733|gb|ABE07614.1| flagellum-specific ATP synthase [Escherichia coli UTI89]
 gi|115513205|gb|ABJ01280.1| flagellum-specific ATP synthase [Escherichia coli APEC O1]
 gi|218365567|emb|CAR03294.1| flagellum-specific ATP synthase [Escherichia coli S88]
 gi|294493096|gb|ADE91852.1| flagellar protein export ATPase FliI [Escherichia coli IHE3034]
 gi|307626583|gb|ADN70887.1| flagellum-specific ATP synthase [Escherichia coli UM146]
 gi|315286663|gb|EFU46096.1| flagellar protein export ATPase FliI [Escherichia coli MS 110-3]
 gi|323186817|gb|EFZ72137.1| flagellar protein export ATPase FliI [Escherichia coli RN587/1]
 gi|323952434|gb|EGB48307.1| ATPase FliI/YscN family protein [Escherichia coli H252]
 gi|323956337|gb|EGB52080.1| ATPase FliI/YscN family protein [Escherichia coli H263]
          Length = 457

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLESYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|37721025|gb|AAN32515.1| ATP synthase beta subunit [Narcissus elegans]
          Length = 497

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFLPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+++A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALSMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|182412699|ref|YP_001817765.1| ATP synthase F1, alpha subunit [Opitutus terrae PB90-1]
 gi|177839913|gb|ACB74165.1| ATP synthase F1, alpha subunit [Opitutus terrae PB90-1]
          Length = 508

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 100/442 (22%), Positives = 175/442 (39%), Gaps = 27/442 (6%)

Query: 1   MQKNLETLAQ-LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   LE + Q +A+  S+ +    G+I ++      +  LS  V   + V   G     +
Sbjct: 1   MSTVLEQIEQQIAKLSSQAVKKNTGHIIAVADGVARIDGLSD-VMYNEMVEFPGG---TI 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G   ++  GD     GR   +       GR ++ALG P+DG   
Sbjct: 57  GIALNLEQDEVGCVVLGDISKLKEGDEAKTTGRLLSVPVGKALLGRAVDALGNPVDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + +  +    P  + RQ V +   TGI  ID   P+  GQR  +    G GK+T+ 
Sbjct: 117 IAATE-TYPVERIAPGIIVRQSVTQPLFTGIMAIDSMIPIGRGQRELIIGDRGTGKTTIA 175

Query: 179 SMFARSDCFD---------------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                +                     I   VG++   +   I         + +++V A
Sbjct: 176 IDTIINQAKINKVGLASGDSKFRPMYSIYVAVGQKNSNIVRTISALEAAGALEYTIIVAA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + ++P  + +AP +   + E+F   G + L++ D +++ A + R+I+           Y
Sbjct: 236 PAADNPANQYLAPFSGAAMGEWFMENGMDALIVYDDLSKHAVAYRQISLILKRPSGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           P  VF    RLLER    +  KG++T +  +     + +  I  +V SI DG I L   L
Sbjct: 296 PGDVFYLHSRLLERSARLQG-KGSLTGLPIIETQAGDVSAYIPTNVISITDGQIFLETDL 354

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P V    SVSR+   A     K++   L   + +F E         +   +D  
Sbjct: 355 FNQGIRPAVSVGLSVSRVGSAAQIKATKQVGGKLKGELAQFREL---AAFAQFGSDLDAK 411

Query: 403 LDKAVHQVPIIYDFLKQSPSDL 424
               + +   I +  KQ   + 
Sbjct: 412 TKAQLDRGARIVELFKQPAFNP 433


>gi|30351905|emb|CAD48105.1| ATP synthase beta subunit [Veltheimia bracteata]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V  L +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPLGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|57868946|gb|AAW57469.1| ATP synthase beta subunit [Cleyera japonica]
          Length = 485

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|56421893|ref|YP_149211.1| F0F1 ATP synthase subunit beta [Geobacillus kaustophilus HTA426]
 gi|261420763|ref|YP_003254445.1| F0F1 ATP synthase subunit beta [Geobacillus sp. Y412MC61]
 gi|297531558|ref|YP_003672833.1| ATP synthase F1 subunit beta [Geobacillus sp. C56-T3]
 gi|319768433|ref|YP_004133934.1| ATP synthase F1 subunit beta [Geobacillus sp. Y412MC52]
 gi|81819603|sp|Q5KUJ3|ATPB_GEOKA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56381735|dbj|BAD77643.1| F0F1-type ATP synthasebeta chain [Geobacillus kaustophilus HTA426]
 gi|261377220|gb|ACX79963.1| ATP synthase F1, beta subunit [Geobacillus sp. Y412MC61]
 gi|297254810|gb|ADI28256.1| ATP synthase F1, beta subunit [Geobacillus sp. C56-T3]
 gi|317113299|gb|ADU95791.1| ATP synthase F1, beta subunit [Geobacillus sp. Y412MC52]
          Length = 473

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID +  + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPLA
Sbjct: 291 RI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|254804251|ref|YP_003082472.1| ATP synthase beta chain [Neisseria meningitidis alpha14]
 gi|254667793|emb|CBA03755.1| ATP synthase beta chain [Neisseria meningitidis alpha14]
          Length = 465

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVNNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|254501162|ref|ZP_05113313.1| ATP synthase F1, beta subunit [Labrenzia alexandrii DFL-11]
 gi|222437233|gb|EEE43912.1| ATP synthase F1, beta subunit [Labrenzia alexandrii DFL-11]
          Length = 474

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 184/411 (44%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +    + +  + +V   +  + V    +   E + 
Sbjct: 7   GRVTQVIGAVVDVKFDDHLPLILNALEADNQGNRLVLEVAQHLGENTVRTIAMDSTEGLV 66

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    + K +    I  + P  + +   
Sbjct: 67  RGQEVTDTGSAIVVPVGDGTLGRIMNVIGEPVDEAGEI-KHEDKRAIHQEAPEFVEQSTE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 185

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    LT +TIAE F  KG 
Sbjct: 186 TREGNDLYWEMIESGVNKEGGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDKGQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTHKGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            +V V  D+  DP   S  + LD   VLNRS+AE+G YP VDPL S SR+       D  
Sbjct: 304 QAVYVPADDLTDPAPASTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLSANIIGDEH 363

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                ++   + R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 YDTARAVQVTLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 413


>gi|239817140|ref|YP_002946050.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
 gi|239803717|gb|ACS20784.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
          Length = 478

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 155/459 (33%), Positives = 227/459 (49%), Gaps = 23/459 (5%)

Query: 1   MQKNLETLAQLA-EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           ++  L TLAQ   E      +   G ++    +      L   V     +          
Sbjct: 17  LKSWLGTLAQARGEVGLCATIATSGRLTRAVGLVLEAVGLQLPVGSDCLIELPPGYPQRH 76

Query: 60  GQ--VIRINLDIVYICPVGIGEEISLGDLVF-HWGRF-------------RISPSACWCG 103
            +  V+    D +++ P      +  G  VF   G               R+       G
Sbjct: 77  AEAEVVGFAGDRLFLMPQSEVAGLLPGARVFARPGPAQFAGGASGDAHTKRLPVGEGMLG 136

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV++A G+P+DG   L      + + +     + R  ++     G+R I+    +  GQR
Sbjct: 137 RVVDAAGRPLDGLGPLD-VSRRVPLGAPPINPLARAPIDSVLDVGVRAINAMLTVGRGQR 195

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVA 222
           +G+FAGSG+GKS LL M AR    + +++ L+GERGREV++FI      + L +SVVV A
Sbjct: 196 MGLFAGSGVGKSVLLGMMARYTSAEVIVVGLIGERGREVKDFIENTLGEEGLARSVVVAA 255

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +D SP+LR      A  +AEYF  +G +VLLI+DS+TR+A + REIA   GE P  +GY
Sbjct: 256 PADNSPLLRLQGAAYATCLAEYFRDQGRDVLLIMDSLTRYAMAQREIALAVGEPPATKGY 315

Query: 283 PTSVFSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           P SVF++LP L+ER G          G+ITA  +VL +GD+  DPIADS R+ILDGH+VL
Sbjct: 316 PPSVFAKLPALVERAGNGARDANGRGGSITAFYTVLSEGDDQQDPIADSARAILDGHVVL 375

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R+LAE G YP +D  AS+SR         +   V      + R++  RD+  +G Y  G
Sbjct: 376 SRTLAEAGHYPAIDIEASISRAMTALIEPSQFDTVRRFKQALSRYQRNRDLISVGAYAAG 435

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            D  LD+A+   P I  FL+QS  +        E    L
Sbjct: 436 HDPQLDQAIALYPRIEAFLQQSMHERCDYAASIERMGSL 474


>gi|186886339|gb|ACC93572.1| ATPase F1 alpha subunit [Oxychloe bisexualis]
          Length = 358

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 18/360 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 3   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGAPID 62

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 63  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 121

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 122 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 181

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 182 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 241

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 242 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 301

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 302 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLDA 358


>gi|238798574|ref|ZP_04642051.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
 gi|238717594|gb|EEQ09433.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969]
          Length = 454

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/446 (35%), Positives = 243/446 (54%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L +L +  E  S++  + + G ++  T +    T L   + LG   + +    G+  +  
Sbjct: 9   LTSLDKFEERISQSTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERYDNGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+     G      ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARITTGGASASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + SS +   +  K L
Sbjct: 426 QMEIFLQQGMYERSSYEDACQHLKSL 451


>gi|332105863|gb|AEE01394.1| ATP synthase beta chain [Adansonia digitata]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|28872698|ref|NP_795317.1| ATP synthase F1 subunit beta [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213968459|ref|ZP_03396602.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1]
 gi|301384254|ref|ZP_07232672.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063895|ref|ZP_07255436.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
           K40]
 gi|302131979|ref|ZP_07257969.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|81728859|sp|Q87TT4|ATPB_PSESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28855954|gb|AAO59012.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213926747|gb|EEB60299.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1]
 gi|330876336|gb|EGH10485.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964198|gb|EGH64458.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|331017744|gb|EGH97800.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 459

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 184/408 (45%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  +      L    ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALEVKSAAGTTLEVQQQLGDGVVRTIAMGSTE 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 61  GLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEE-RWGIHRPAPSFAEQ 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 298 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V++   I  FL Q 
Sbjct: 358 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVNRARKIQRFLSQP 403


>gi|14718222|gb|AAK72849.1| ATP synthase beta subunit [Shepherdia canadensis]
          Length = 476

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 39  KGRDTLGQEINLTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 99  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 157

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 158 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 218 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 336 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 395

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 396 ILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|332105865|gb|AEE01395.1| ATP synthase beta chain [Brachychiton acerifolius]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|22651732|gb|AAM26938.1| ATP synthase beta subunit [Dionaea muscipula]
          Length = 483

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V    S+   + + +V +G   D LGQ I +  ++        V    
Sbjct: 12  GRIIQIIGPVLDVAFPPSKMPYIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +   +   GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVVDTGAALSVPVGSATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 129 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFAGVGERTREGNDLYKEMKESGVINEQNIGESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EFFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPKIVGDKHYETAQRVKQTLQRYKEVQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 425


>gi|25808407|gb|AAN74330.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 353

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 4   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 64  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 122

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 123 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 182

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 183 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 242

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 243 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 302

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 303 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 353


>gi|332105875|gb|AEE01400.1| ATP synthase beta chain [Guazuma crinita]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|317492411|ref|ZP_07950840.1| flagellar protein export ATPase FliI [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919750|gb|EFV41080.1| flagellar protein export ATPase FliI [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 453

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 153/429 (35%), Positives = 229/429 (53%), Gaps = 14/429 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPV 75
             + G ++  T +    + L   + +G   + +  +   +     +V+  N   +++ P+
Sbjct: 25  ARRYGRLTRATGLVLEASGL--QLPIGATCLIERNDGVKIQQVEAEVVGFNGQQLFLMPL 82

Query: 76  GIGEEISLGDLVFHWGRF------RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
              + I  G  V   G        ++       GRV++   KP+DG     + D+   + 
Sbjct: 83  EEVDGIVPGARVCSQGGGLQSGGKQLPLGPMLLGRVLDGGAKPLDGLPPPEEADVG-SLT 141

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           +     + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D 
Sbjct: 142 TMPFNPLQRTPIVDVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADV 201

Query: 190 VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           +++ L+GERGREV++FIE+ LGD   K+SVV+ A +D SP+LR      A  IAE F  +
Sbjct: 202 IVVGLIGERGREVKDFIENILGDEGRKRSVVIAAPADVSPLLRMQGASYATRIAEDFRDR 261

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+IT
Sbjct: 262 GQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGTHGGGSIT 321

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      S D
Sbjct: 322 AFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTSLISDD 381

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
               V     L+  ++  RD+  +G Y  G D +LD+A+   P +  FL+Q   + S   
Sbjct: 382 HYARVRRFKQLLSSYQRNRDLISVGAYAKGSDPMLDQAITLYPHLEAFLQQGIFERSGYT 441

Query: 429 VFQEITKKL 437
                 + L
Sbjct: 442 DACSSLQAL 450


>gi|149188271|ref|ZP_01866565.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
 gi|148837860|gb|EDL54803.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
          Length = 461

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 187/408 (45%), Gaps = 17/408 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I  +      V    +    + D +   G  + +L  V+     +   +V    +G  
Sbjct: 4   GKIVKVIGAVVDVEFEQNSGPRVYDALKVVGDENSSL--VLEVQQQLGGGVVRCIAMGSS 61

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR++N LG+PID    +G+   S EI    P   +
Sbjct: 62  DGLRRGLQVETTGSPITVPVGEETLGRIMNVLGQPIDECGPIGE-QASYEIHRPAPSYED 120

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 121 QSNSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG 180

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 181 VGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVL 240

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 241 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAV 298

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +    
Sbjct: 299 YVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPQIIGQEHYDT 358

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   + R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 359 AQAVQKTLQRYKELKDIIAILGMDELSEED-KQLVSRARKVERFLTQP 405


>gi|113461832|ref|YP_719901.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 129PT]
 gi|123327497|sp|Q0I5X3|ATPB_HAES1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|112823875|gb|ABI25964.1| ATP synthase F1 subcomplex beta subunit [Haemophilus somnus 129PT]
          Length = 457

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIIQIIGAVIDVEFPQNAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGSSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR++N LG+PID    +G  + +  I    P    +
Sbjct: 59  GLKRGLKVENTGNPISVPVGTKTLGRIMNVLGEPIDEKGEIGAEE-TWAIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|21633419|gb|AAM52184.1| ATP synthase beta subunit [Dicranostyles villosus]
          Length = 487

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 186/413 (45%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V QG++++   +V ++  +  V    +   + +
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNNVTCEVQQLLGNNRVRAVAMSDTDGL 80

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    ++      GR+ N LG+P+D    +   + +  I    P  +    
Sbjct: 81  MRGMEVIDTGAPISVAVGGATLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQLDT 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 140 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 199

Query: 198 RGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +     +         K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 200 RTREGNDLYLEMKESRMINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 259

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 260 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 317

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 318 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 377

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|6561651|gb|AAF16995.1|AF197663_1 ATPase alpha subunit [Illicium floridanum]
          Length = 404

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 92/405 (22%), Positives = 165/405 (40%), Gaps = 23/405 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRGSSKLE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 LAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 397


>gi|109900593|ref|YP_663848.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas atlantica T6c]
 gi|123063994|sp|Q15MU4|ATPB2_PSEA6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|109702874|gb|ABG42794.1| ATP synthase F1, beta subunit [Pseudoalteromonas atlantica T6c]
          Length = 461

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 188/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I      +      V        + +G       +V + +   +V    +G 
Sbjct: 1   MSQGKVVQIIGAVVDIEFPQDSVPKIYDALRITEGDLQGLTLEVQQQLGGGVVRTIALGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G   ++       GR+++ LG PID    +G+ +  M I  + P   
Sbjct: 61  TDGLRRGLTVDNTGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPTYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 DQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT++ +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++ R++E +DI  I G     +     +V +   I  FL Q 
Sbjct: 358 TARGVQSVLQRYKELKDIIAILGMDELSEED-KLSVSRARKIQRFLSQP 405


>gi|212896660|gb|ACJ38533.1| membrane-bound ATP synthase subunit B [Clitoria ternatea]
          Length = 468

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V      +  + + ++ +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGGMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +   D +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TDTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEENIVESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|16943666|emb|CAD10759.1| ATP synthase, beta subunit [Eriospermum bayeri]
          Length = 493

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFSPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMNESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPNIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|165977082|ref|YP_001652675.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|226739969|sp|B0BRX2|ATPB_ACTPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|165877183|gb|ABY70231.1| ATP synthase beta chain [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 457

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGLVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR++N LG+PID    +G+ +   +I    P    +
Sbjct: 59  GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|167574676|ref|ZP_02367550.1| flagellum-specific ATP synthase [Burkholderia oklahomensis C6786]
          Length = 435

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 162/425 (38%), Positives = 229/425 (53%), Gaps = 11/425 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G ++ ++ +    +     +  G   V +    D +  QV+  N +  Y+ P  
Sbjct: 15  PVARLTGRLTGVSGLLLKASG--CPLETGRRCVIESSGGDWIDAQVVGFNREESYLMPFK 72

Query: 77  IGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               +  G  V      G  R      W GRVIN LG+PIDG   LG GD  +       
Sbjct: 73  KPVGLVAGAQVLARDRKGALR--VGRAWLGRVINGLGEPIDGHGPLG-GDQVLNEKPAAV 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + ++ V      G+R I+    L  GQR+G+ AGSG+GKS LL M  R+   D V++ 
Sbjct: 130 NPLRKRAVRDVLDVGVRAINGALTLGKGQRVGLMAGSGVGKSVLLGMMTRATAADVVVVG 189

Query: 194 LVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREF+E  LGD  L K+V+VVA +DESP++R  A      IA ++   G +V
Sbjct: 190 LIGERGREVREFVEHALGDEGLAKAVLVVAPADESPLMRLRAAELCHAIAAHYRDAGSDV 249

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  RGYP SVF  LP+L+E  G  E   G+++A+ +
Sbjct: 250 LLLVDSLTRYAMAQREIALSLGEPPATRGYPPSVFGMLPQLVETAGNGEGS-GSMSAIYT 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+ NDP+ D+ R+ILDGHIVL+R LAE G YP +D   SVSR   +   A     
Sbjct: 309 VLAEGDDQNDPVVDTARAILDGHIVLSRELAERGHYPAIDVTRSVSRCMAQIADARHVVR 368

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              L  +I R E+ RD+  +GGY  G D   D+AV     I  FL+Q   + +S D    
Sbjct: 369 AGQLKEMIGRHEQVRDLIPLGGYVQGADAATDRAVAMAERIDAFLRQPMHEAASFDETYA 428

Query: 433 ITKKL 437
             + L
Sbjct: 429 ALEAL 433


>gi|155029375|dbj|BAF75573.1| ATP synthase beta subunit [Spirostachys africana]
          Length = 489

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRVAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7706839|emb|CAB90028.1| ATP synthase beta subunit [Averrhoa carambola]
          Length = 491

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 43  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 102

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 103 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 161

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 162 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 221

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 222 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFMDNIFRFVQAGSEVSAL 281

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 282 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 339

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 340 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 399

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 400 ILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|212896602|gb|ACJ38504.1| membrane-bound ATP synthase subunit B [Amphicarpaea bracteata]
          Length = 470

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|25808487|gb|AAN74370.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 155/354 (43%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTAVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|115350153|ref|YP_771992.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria AMMD]
 gi|122324407|sp|Q0BJL5|ATPB_BURCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115280141|gb|ABI85658.1| ATP synthase F1 subcomplex beta subunit [Burkholderia ambifaria
           AMMD]
          Length = 464

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 189/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRESMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    + + +++  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEVTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|22127336|ref|NP_670759.1| flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45442788|ref|NP_994327.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108809063|ref|YP_652979.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua]
 gi|108810740|ref|YP_646507.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|150260257|ref|ZP_01916985.1| lateral flagellar assembly ATPase [Yersinia pestis CA88-4125]
 gi|165925142|ref|ZP_02220974.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939070|ref|ZP_02227622.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166008909|ref|ZP_02229807.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166211962|ref|ZP_02237997.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167398591|ref|ZP_02304115.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167419081|ref|ZP_02310834.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425097|ref|ZP_02316850.1| flagellum-specific ATP synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167466349|ref|ZP_02331053.1| flagellum-specific ATP synthase [Yersinia pestis FV-1]
 gi|218927904|ref|YP_002345779.1| flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|229837400|ref|ZP_04457563.1| lateral flagellar assembly ATPase [Yersinia pestis Pestoides A]
 gi|229840613|ref|ZP_04460772.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842836|ref|ZP_04462988.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900937|ref|ZP_04516061.1| lateral flagellar assembly ATPase [Yersinia pestis Nepal516]
 gi|270487681|ref|ZP_06204755.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294502781|ref|YP_003566843.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|21960418|gb|AAM87010.1|AE013949_4 flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45437654|gb|AAS63204.1| putative flagellum-specific ATP synthase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774388|gb|ABG16907.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|108780976|gb|ABG15034.1| putative flagellum-specific ATP synthase [Yersinia pestis Antiqua]
 gi|115346515|emb|CAL19391.1| putative flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|149289665|gb|EDM39742.1| lateral flagellar assembly ATPase [Yersinia pestis CA88-4125]
 gi|165913026|gb|EDR31651.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165923342|gb|EDR40493.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992248|gb|EDR44549.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206708|gb|EDR51188.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166963075|gb|EDR59096.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051095|gb|EDR62503.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167055860|gb|EDR65641.1| flagellum-specific ATP synthase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229682276|gb|EEO78368.1| lateral flagellar assembly ATPase [Yersinia pestis Nepal516]
 gi|229690103|gb|EEO82160.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696979|gb|EEO87026.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705523|gb|EEO91533.1| lateral flagellar assembly ATPase [Yersinia pestis Pestoides A]
 gi|262360813|gb|ACY57534.1| flagellum-specific ATP synthase [Yersinia pestis D106004]
 gi|262364758|gb|ACY61315.1| flagellum-specific ATP synthase [Yersinia pestis D182038]
 gi|270336185|gb|EFA46962.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294353240|gb|ADE63581.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|320016719|gb|ADW00291.1| lateral flagellar assembly ATPase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 446

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 155/427 (36%), Positives = 226/427 (52%), Gaps = 18/427 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           +L    G +  +T +      +   + +G     +  +   +  QV+  + DI Y+ P  
Sbjct: 18  HLARVAGRLVRVTGLLL--ESVGCRLAIGQRCRIESVDETFIEAQVVGFDRDITYLMPFK 75

Query: 77  IGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               +  G  VF     G   I     W GRVIN LG+P+DG   LG    S  +  ++P
Sbjct: 76  HPGGVLGGARVFPSEQDGELLI--GDSWLGRVINGLGEPLDGKGQLGG---STPLQQQLP 130

Query: 134 --PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS LL M  R    D V+
Sbjct: 131 QIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRYTQADVVV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREV+EFI        + KSVVV A +DESP++R  A      IA Y+  KG 
Sbjct: 191 VGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATELCHAIATYYRDKGH 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S    G +TA+
Sbjct: 251 DVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNSSGN-GTMTAI 309

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +   + + 
Sbjct: 310 YTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQSISRCMSQVIGSQQA 369

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           K  S L      +   + +  +GGY  G D + D+AVH  P I  FL+Q   ++    +F
Sbjct: 370 KAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQFLRQ---EVGHPALF 426

Query: 431 QEITKKL 437
               ++L
Sbjct: 427 SASVEQL 433


>gi|332105861|gb|AEE01393.1| ATP synthase beta chain [Craigia yunnanensis]
 gi|332105867|gb|AEE01396.1| ATP synthase beta chain [Excentrodendron hsienmu]
          Length = 493

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|302388308|ref|YP_003824130.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
 gi|302198936|gb|ADL06507.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
          Length = 464

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 188/409 (45%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVGIG 78
           G I+ I      +     +   + + +    K+   L  V+ ++     D V    +G  
Sbjct: 7   GKITQIIGAVLDIKFSQGKLPDINEAIDITTKDGGRL--VVEVSQHIGDDTVRCIAMGTT 64

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G D V       +       GR+ N LG PID   +  +      I    P    
Sbjct: 65  DGLVRGMDAVATGAPITVPVGEETLGRIFNVLGDPIDNKPA-PEVKEHFPIHRPAPNFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   
Sbjct: 124 QSTETEVLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G  +V
Sbjct: 184 VGERTREGNDLYHEMQESGVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D      +  +
Sbjct: 302 VYVPADDLTDPAPANTFAHLDATTVLDRSIVELGIYPAVDPLGSTSRILDPRIVGEEHYR 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  + G     +      V +   I  FL Q 
Sbjct: 362 VARGVQEVLQKYKELQDIIAMLGMDELSEED-KITVARARKIQRFLSQP 409


>gi|229577761|ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis saniculifolia]
 gi|226933889|gb|ACO92022.1| ATP synthase CF1 beta subunit [Megaleranthis saniculifolia]
          Length = 498

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+  L +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVSFPLGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4995858|emb|CAB44290.1| H(+)-transporting ATP synthase [Tilia platyphyllos]
          Length = 488

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I I  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINITCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|183598651|ref|ZP_02960144.1| hypothetical protein PROSTU_02057 [Providencia stuartii ATCC 25827]
 gi|188020836|gb|EDU58876.1| hypothetical protein PROSTU_02057 [Providencia stuartii ATCC 25827]
          Length = 454

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 230/426 (53%), Gaps = 14/426 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVV--HQGKNSDNLGQVIRINLDIVYICPV 75
            ++ + G ++ IT +      +   +    FV      ++ + + +V+  N   + + P+
Sbjct: 23  PMIRRYGRLTKITGLVMEAEGIKMPLGATCFVERAINDRHDEVVCEVVGFNGPRMLLMPL 82

Query: 76  GIGEEISLGDLVFH--------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              E I+ G  V+           R  +       GR+++A G P+DG   L        
Sbjct: 83  ADLEGIAPGARVYAQTNGDDGQTSRL-LPLGDELLGRILDAQGTPLDGKGPLD-AKQRAP 140

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +++     + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR    
Sbjct: 141 LITPPINPLERTPIHSVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARFTQA 200

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D +++ L+GERGREV++FIE+ LG + LK++VVV A +D SP+LR      A  IAEYF 
Sbjct: 201 DIIVVGLIGERGREVKDFIENILGAEGLKRAVVVAAPADVSPLLRMQGASYATRIAEYFR 260

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G NVLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP L+ER G  +   G+
Sbjct: 261 DLGKNVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGKN-GGS 319

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR   +   
Sbjct: 320 ITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTELID 379

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               + +     L   ++  RD+  +G Y  G D +LD A+   P +  FL+Q   +   
Sbjct: 380 KQHYRQIQRFKQLTSSYQRNRDLINVGAYATGSDPLLDMAIQYYPRMSKFLQQDIDERCD 439

Query: 427 EDVFQE 432
                E
Sbjct: 440 YQSACE 445


>gi|187918162|ref|YP_001883725.1| flagellum-specific ATP synthase [Borrelia hermsii DAH]
 gi|119861010|gb|AAX16805.1| flagellum-specific ATP synthase [Borrelia hermsii DAH]
          Length = 436

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 254/441 (57%), Gaps = 13/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59
           M    E  +++ +      +V  G +  I  +   +  +     +GD   + Q       
Sbjct: 2   MDNFFEGYSKILDGVETISLV--GRVRKIKGLL--IESVGPKCGIGDLCFIQQVSGKKIY 57

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +      + I +GD V+    + +I+ S    GRVI++LG+PID    
Sbjct: 58  AEVLGFNGCFVSLMAYEGFDGIEVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGQ 117

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
              G+   E+       + R    K   TG+RV+D F P+  GQR+G+F+G+G+GKSTLL
Sbjct: 118 FL-GNHYKELSFSSINPLKRGIFSKQIVTGVRVLDGFLPVAKGQRVGIFSGAGVGKSTLL 176

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M A++   D  +I+ +GERGRE+ EFI  D   +  KKSV++V+TSDESPI R     T
Sbjct: 177 GMIAKNSKADVNVIAFIGERGRELNEFIEYDLGEECFKKSVLIVSTSDESPISRYKGAYT 236

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE+F  +G +V+L+ DSITRFA++ REI+ + GELP  +GYP SVF E+P LLER+
Sbjct: 237 ATLIAEHFRDRGMDVMLLFDSITRFANAKREISLSMGELPATKGYPPSVFVEIPILLERL 296

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G + K  G+IT   +VLV+ D+  +PIAD+++++LDGHI+L+R L++ G YP V+ L+S 
Sbjct: 297 GLNGK--GSITGFYTVLVESDDFTEPIADNMKAVLDGHIILDRDLSDRGIYPSVNILSST 354

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR   +  + +++KL+S + +L+  ++   D+   G Y  G +  +D A+ + P I DFL
Sbjct: 355 SRSLHRIVNFEKQKLISKIRNLLSIYKNYEDLIKTGIYMKGSNKEVDLAIAKYPKIIDFL 414

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
            Q   +   E  F+ +  +++
Sbjct: 415 SQGMQE---EFDFENLDNEMR 432


>gi|107024491|ref|YP_622818.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia AU 1054]
 gi|116688130|ref|YP_833753.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia HI2424]
 gi|170731477|ref|YP_001763424.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia MC0-3]
 gi|171315826|ref|ZP_02905057.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5]
 gi|254246698|ref|ZP_04940019.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184]
 gi|118573513|sp|Q1BRB0|ATPB_BURCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201694|sp|A0K2Y3|ATPB_BURCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739983|sp|B1JSV7|ATPB_BURCC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|105894680|gb|ABF77845.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia
           AU 1054]
 gi|116646219|gb|ABK06860.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia
           HI2424]
 gi|124871474|gb|EAY63190.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184]
 gi|169814719|gb|ACA89302.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia MC0-3]
 gi|171099015|gb|EDT43800.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5]
          Length = 464

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 189/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    + + D++  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESDVTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|116617115|ref|YP_817489.1| ATP synthase CF1 beta subunit [Coffea arabica]
 gi|122153628|sp|A0A342|ATPB_COFAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|116242171|gb|ABJ89686.1| ATP synthase CF1 beta subunit [Coffea arabica]
          Length = 498

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V   +  +       VV   K  D +GQ I +  ++        V   
Sbjct: 21  GRIVQIIGPVLDVAFPAGKMPNIYNALVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D   ++     +  I    
Sbjct: 78  AMSSTDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGAVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|19703700|ref|NP_603262.1| F0F1 ATP synthase subunit beta [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|81848278|sp|Q8RGE2|ATPB_FUSNN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|19713824|gb|AAL94561.1| ATP synthase beta chain, sodium ion specific [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 462

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/405 (27%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ I S    +    +   + + +  + ++ + + +V   +  ++V    +   + + 
Sbjct: 4   GTITQIISAVVDIAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLK 63

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   I       GR++N LG+P+D    L   +  + I  + P   + +  
Sbjct: 64  RGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLN-AETFLPIHREAPEFDDLETE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+   +      + K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 183 TREGRDLYGEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R++A  G YP VDPL S S+ L++     +  ++   
Sbjct: 301 ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 361 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIERFFSQP 404


>gi|118590578|ref|ZP_01547980.1| F0F1 ATP synthase subunit beta [Stappia aggregata IAM 12614]
 gi|118437041|gb|EAV43680.1| F0F1 ATP synthase subunit beta [Stappia aggregata IAM 12614]
          Length = 474

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 106/411 (25%), Positives = 185/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +    + +  + +V   +  + V    +   E + 
Sbjct: 7   GRITQVIGAVVDVKFDDHLPLILNALEVDNQGTRLVLEVAQHLGENTVRTIAMDSTEGLV 66

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V        +       GR++N +G+P+D    +   +    I  + P  + +   
Sbjct: 67  RGQEVVDTDAPIVVPVGDGTLGRIMNVIGEPVDEAGEI-PHENKRAIHQEAPAFIEQSTE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 185

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 186 TREGNDLYWEMIESGVNKEGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTNKGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   S  + LD   VLNRS+AE+G YP VDPL S SR+ D      + 
Sbjct: 304 QAVYVPADDLTDPAPASTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDARIIGEEH 363

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   ++   + R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 YETARAVQVTLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 413


>gi|78064765|ref|YP_367534.1| F0F1 ATP synthase subunit beta [Burkholderia sp. 383]
 gi|118573515|sp|Q39KX6|ATPB_BURS3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77965510|gb|ABB06890.1| ATP synthase F1 subcomplex beta subunit [Burkholderia sp. 383]
          Length = 464

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 188/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    + + + +  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESETTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|37524072|ref|NP_927416.1| F0F1 ATP synthase subunit beta [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81572787|sp|Q7NA94|ATPB_PHOLL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|36783495|emb|CAE12335.1| ATP synthase beta chain [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 460

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 189/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q   +  + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDTVPKVYDALEVQNGEAKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V   G    +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLSRGLSVTDLGHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEE-RWAIHRPAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVARARKIQRFLSQP 404


>gi|34763442|ref|ZP_00144389.1| ATP synthase beta chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742368|ref|ZP_04572849.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13]
 gi|256845696|ref|ZP_05551154.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_36A2]
 gi|294785057|ref|ZP_06750345.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_27]
 gi|27886883|gb|EAA24008.1| ATP synthase beta chain, sodium ion specific [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229430016|gb|EEO40228.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13]
 gi|256719255|gb|EEU32810.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_36A2]
 gi|294486771|gb|EFG34133.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_27]
          Length = 462

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/405 (27%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ I S    V    +   + + +  + ++ + + +V   +  ++V    +   + + 
Sbjct: 4   GTITQIISAVVDVAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLK 63

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   I       GR++N LG+P+D    +   +  + I  + P   + +  
Sbjct: 64  RGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPIN-AETFLPIHREAPEFDDLETE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+   +      + K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 183 TREGRDLYGEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R++A  G YP VDPL S S+ L++     +  ++   
Sbjct: 301 ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 361 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIERFFSQP 404


>gi|332105871|gb|AEE01398.1| ATP synthase beta chain [Dombeya calantha]
          Length = 479

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|300024907|ref|YP_003757518.1| ATP synthase F1 subunit beta [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526728|gb|ADJ25197.1| ATP synthase F1, beta subunit [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 477

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 193/438 (44%), Gaps = 26/438 (5%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I  +T     V    Q   + + +  +   +  + +V   +  + V    +  
Sbjct: 1   MAKNVGKIQQVTGAVIDVHFEGQLPEILNALETKNHGNRLVLEVAQHLGENTVRTIAMDS 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GR++N +G+P+D    + K      I    P   
Sbjct: 61  TEGLVRGQEVVDTGAPISVPVGDETLGRIMNVIGEPVDEAGPI-KTPSVRAIHQPSPTFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 DQATEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVT 240
            VGER RE  +   + +   +              K  +V    +E P  R    L+ +T
Sbjct: 180 GVGERTREGNDLYYEMIESKVNLDPKKNNGSAKGSKCALVYGQMNEPPGARARVALSGLT 239

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 240 VAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--T 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+
Sbjct: 298 TTQKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRM 357

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +  ++   +  ++ +++  +DI  I G     +      V +   I  F+ Q
Sbjct: 358 LDPRIVGEEHYQVARKVQAILQKYKSLQDIIAILGMDELSEED-KLTVARARKIERFMSQ 416

Query: 420 SPSDLSSEDVFQEITKKL 437
                   +VF     KL
Sbjct: 417 P---FHVAEVFTGSPGKL 431


>gi|256833238|ref|YP_003161965.1| ATPase, FliI/YscN family [Jonesia denitrificans DSM 20603]
 gi|256686769|gb|ACV09662.1| ATPase, FliI/YscN family [Jonesia denitrificans DSM 20603]
          Length = 446

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 166/423 (39%), Positives = 242/423 (57%), Gaps = 11/423 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +S    +   V  L   V  GD V      +    +V+ ++       P+     +
Sbjct: 21  RVGVVSRAVGLSLDVRGLDCAV--GDVVAVGESGTPARAEVVAVHDGFATCMPLTAIPAL 78

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V H G   R+   +   GRVI+ LG+PIDG   L   D  +++ +  P  + RQR
Sbjct: 79  RAGAQVRHTGGGIRVPVGSGLLGRVIDPLGEPIDGLGPLTHVDF-VDVDAAAPHPLARQR 137

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           V +    G+RV+D  T +  GQR+G+FAGSG+GKSTLLSM AR       +I+L+GERGR
Sbjct: 138 VSEPLALGVRVMDTLTSVGRGQRMGLFAGSGVGKSTLLSMIARGTDAQVSVIALIGERGR 197

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+ED LG + L +S+VV+ATSD+  ++R+ A  TA  IA++ +  G++V+L++DS+
Sbjct: 198 EVREFLEDDLGPEGLARSIVVIATSDQPALMRQRAAFTATRIAQWLAQMGNDVVLMMDSL 257

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR A + REI  + GE P  RGYP S FS L  LLER G +E  +G +T + +VLVDGD+
Sbjct: 258 TRVAMAQREIGLSVGEPPATRGYPPSTFSVLANLLERAGSAE--QGTVTGLYTVLVDGDD 315

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HN+PIAD+ RSILDGH+VL+R LA  G YP +D LAS+SR+A K      +    +L   
Sbjct: 316 HNEPIADAARSILDGHVVLDRKLAVRGHYPAIDALASISRVASKVNDPANQAHADTLRRF 375

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS----SEDVFQEITK 435
           +      +D+  IG Y  G +  +D A+ Q   I  FL Q   + +    S +   ++  
Sbjct: 376 MAAKAGVQDLIDIGAYAAGSNPTVDAALAQAQDITSFLCQRMGEPAPLAESWNRLADLAS 435

Query: 436 KLQ 438
            L+
Sbjct: 436 ALE 438


>gi|197288462|gb|ACH57437.1| AtpA [Aliivibrio finisterrensis]
          Length = 420

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 96/427 (22%), Positives = 178/427 (41%), Gaps = 27/427 (6%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG 84
            I S++     +  L+  V  G+     G         + +  D V    +G   ++  G
Sbjct: 1   TIVSVSDGIIRIHGLAD-VMQGEICELPGG---RYALALNLERDSVGAVVMGPYADLQEG 56

Query: 85  DLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
             V   GR   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++
Sbjct: 57  MKVTGTGRILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQ 115

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGRE 201
             +TG + +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   
Sbjct: 116 PVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIYSIYVAIGQKAST 175

Query: 202 VREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           +   +           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D ++
Sbjct: 176 IANVVRKLEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLS 235

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNI 307
           + A + R+I+      P    +P  VF    RLLER     +             + G++
Sbjct: 236 KQAVAYRQISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVKGKTGSL 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A + 
Sbjct: 296 TALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGAAQTK 355

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             KKL   +   + ++ E   +     +   +D    K +     + + +KQ     +  
Sbjct: 356 IIKKLSGGIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ--YAPM 410

Query: 428 DVFQEIT 434
            VF +  
Sbjct: 411 SVFDQAL 417


>gi|197285492|ref|YP_002151364.1| flagellum-specific ATP synthase [Proteus mirabilis HI4320]
 gi|194682979|emb|CAR43407.1| flagellum-specific ATP synthase [Proteus mirabilis HI4320]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/446 (35%), Positives = 233/446 (52%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           LE LA      +K   + Q G ++  T +      L   + LG   + +      + +V 
Sbjct: 9   LEKLADAESRLNKIPRIRQYGRLTRATGLVMEAKGL--VMPLGSTCLIERTIGKTVEEVE 66

Query: 64  ----RINLDIVYICPVGIGEEISLGDLVF------HWGRFR-ISPSACWCGRVINALGKP 112
                 N   + + P+   E ++ G  V+        G  R +       GRV++  G P
Sbjct: 67  SEVVGFNGSQMLLMPLQEVEGLTPGARVYAQSIPGREGEGRQLPLGDALLGRVLDGSGDP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG            +++     + R  +      G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPP-PDTSYRAPLITPPINPLQRTPITDVLDVGVRAINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVVV A +D SP+LR
Sbjct: 186 GKSVLLGMMARFTQADVIVVGLIGERGREVKDFIENILGKEGLARSVVVAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +
Sbjct: 306 ALVERAGNGVDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR           + V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDKTHYRRVQVFKQLLSSYQRNRDLINVGAYATGSDPMLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   +  S     E   +L
Sbjct: 426 SLAKFLQQDIQEQCSYQHACEQLNQL 451


>gi|167626147|ref|YP_001676441.1| FliI/YscN family ATPase [Shewanella halifaxensis HAW-EB4]
 gi|167356169|gb|ABZ78782.1| ATPase, FliI/YscN family [Shewanella halifaxensis HAW-EB4]
          Length = 446

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 158/445 (35%), Positives = 239/445 (53%), Gaps = 16/445 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDN 58
           M+ N + L     D+ K  V Q  G ++ +  +      +   +  GD    +   N   
Sbjct: 1   MKLNADIL-----DWPKVPVAQVYGRLTRVNGLLL--EAVGCQLGTGDRCYVECRDNHLV 53

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDD 117
             +V+    D + + P+     +  G  V    GR +I       GRV++ LG+P+D   
Sbjct: 54  EAEVVGFYKDTLCLMPIEPTNGLMPGARVMPIEGRCQIPTGLGLLGRVLDGLGQPLDDLG 113

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K    + +  K    + R+ +      GIR I+   P+  GQR+G+FAGSG+GKS L
Sbjct: 114 CI-KHLPHVPLQFKSINPLLRKPIRDPLDVGIRSINALLPVGRGQRLGLFAGSGVGKSVL 172

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREVREFIE+    +  K++VVV A +D +P++R  A  
Sbjct: 173 LGMMTRFTEADVVVVGLIGERGREVREFIEESLGEEGRKRAVVVAAPADTTPLMRMRAMR 232

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IA  +  +G  VLL++DS+TR+A + REIA + GE P  +GYP S F++LP L+E 
Sbjct: 233 LCHHIAAAYRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPSLVEM 292

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S+   G +TA  +VL +GD+  DPIADS R+ILDGHIVLNR LAE+G +P +D  AS
Sbjct: 293 AGNSQHPTGTLTAFYTVLTEGDDQQDPIADSARAILDGHIVLNRKLAEQGHFPAIDIGAS 352

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSRLA +       +      HL  R+ E +++  +GGY+ G D  +D AV   P +  F
Sbjct: 353 VSRLATQVAKQSSLEQGQWFRHLNSRYNEVKELLPLGGYQAGHDAEMDMAVRSYPQMAAF 412

Query: 417 LKQSPSD----LSSEDVFQEITKKL 437
           L+Q+        SS    +++  ++
Sbjct: 413 LRQATHTQADLTSSLSALEQLVSQM 437


>gi|113197031|gb|AAQ74530.2| F1-ATPase alpha subunit [Epipactis helleborine]
          Length = 417

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    +  GDLV
Sbjct: 1   SVGDGIARVFGLNE-IQAGEXVEFA---SGVKGXALXLEXENVGIVVXGSDTXMKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++A G PIDG  +L   +    +  K P  + RQ V +  +
Sbjct: 57  KRTGSIVDVPAGKALLGRVVDAXGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ MAP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 401


>gi|4995848|emb|CAB44291.1| H(+)-transporting ATP synthase [Thomasia solanacea]
          Length = 483

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVINTGAPLSVPVGGSTLGRIFNVLGEPIDNLGPVD-TRTTSPIHKPAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|152977492|ref|YP_001377009.1| F0F1 ATP synthase subunit beta [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189081327|sp|A7GV56|ATPB_BACCN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|152026244|gb|ABS24014.1| ATP synthase F1, beta subunit [Bacillus cytotoxicus NVH 391-98]
          Length = 464

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 186/406 (45%), Gaps = 12/406 (2%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G ++ I      V      +  + + +  +    +   +V + +  D V    +   + +
Sbjct: 4   GRVTQIMGPVVDVKFDGGKLPEIYNALRIKKDEVNLTLEVALHLGDDTVRTVAMSSTDGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   GR   +       GRV N LG+ ID D  +        I  + P       
Sbjct: 64  VRGTEVEDTGRPISVPVGDATLGRVFNVLGEAIDLDGEIPADVRRDPIHRQAPAFEELST 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 124 KVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGE 183

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      +KK+ +V    +E P  R+   LT +T+AE+F  +   +VLL 
Sbjct: 184 RTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D++ DP   +  + LD    L R L + G YP VDPLAS SR         +  ++  
Sbjct: 302 PADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E +DI  I G     +      VH+   I  FL Q+
Sbjct: 362 QVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQFFLSQN 406


>gi|88705415|ref|ZP_01103126.1| ATP synthase alpha chain [Congregibacter litoralis KT71]
 gi|88700505|gb|EAQ97613.1| ATP synthase alpha chain [Congregibacter litoralis KT71]
          Length = 514

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 177/447 (39%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L       L         G I S+T     +  L++ V  G+ +   G   
Sbjct: 3   QLNPSEISDLIRQRIDQLDVSSEARNVGTIVSVTDGIIRIHGLTE-VMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVVLGDYKGLAEGQSCRCTGRILEVPVGPELQGRVVDALGSPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++  +    P  + RQ V++  + G++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGPVNAA-MTDALEKVAPGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      K +   VG++   V   +           ++VV A + +   ++ 
Sbjct: 178 AIAVDAIINQKGTGIKCVYVAVGQKTSSVAAVVRKLEEHGAMDHTIVVAANASDPAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEKFTDGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDMFNSGIRPAMNAGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DEATKAQLDHGERVTELMKQKQYSPQS 441


>gi|293603080|ref|ZP_06685514.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC
           43553]
 gi|292818474|gb|EFF77521.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC
           43553]
          Length = 467

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    + + +
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMKVTGTGAPISVPVGTGTLGRIMDVLGRPIDEAGPI-QHE 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 EKRGIHQSAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDSSSR 349

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +   +   + R++E RDI  I G          +AV +   I  FL 
Sbjct: 350 QLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILGMDELS-PEDKQAVARARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|94502498|ref|YP_588124.1| ATP synthase CF1 beta subunit [Helianthus annuus]
 gi|118573542|sp|Q1KXV2|ATPB_HELAN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|88656902|gb|ABD47153.1| ATP synthase CF1 beta subunit [Helianthus annuus]
          Length = 498

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDNS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|158430153|pdb|2QE7|D Chain D, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430154|pdb|2QE7|E Chain E, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|158430155|pdb|2QE7|F Chain F, Crystal Structure Of The F1-Atpase From The
           Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1
 gi|33329387|gb|AAQ10090.1| ATP synthase subunit beta [Bacillus sp. TA2.A1]
          Length = 462

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 107/407 (26%), Positives = 183/407 (44%), Gaps = 14/407 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G I  +      +   S  +        + + +      +  + +  ++V    +   + 
Sbjct: 4   GRIIQVMGPVVDIQFESGQLPDIYNAITIERPQGGTLTVEAAVHLGDNVVRCVAMASTDG 63

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GRV N LG+PID    +   +    I    P      
Sbjct: 64  LVRGLEAVDTGAPISVPVGKATLGRVFNVLGEPIDEQGEVNAEE-RHPIHRPAPEFEELS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VG
Sbjct: 123 TADEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAQEHGGLSVFAGVG 182

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 183 ERTREGNDLYHEMKDSGVISKTSMVFGQMNEPPGARLRVALTGLTMAEYFRDREGQDVLL 242

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ ++ 
Sbjct: 243 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIY 300

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D++ DP   +  + LD    L R LAE G YP VDPLAS SR+   A    +  ++ 
Sbjct: 301 VPADDYTDPAPATTFAHLDATTNLERKLAEMGIYPAVDPLASTSRILSPAVVGEEHYRVA 360

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R+ + +DI  I G     D      V +   I  FL Q 
Sbjct: 361 RGVQQVLQRYNDLQDIIAILGMDELSDED-KLIVARARKIQRFLSQP 406


>gi|62902859|gb|AAY19344.1| ATP synthase beta subunit [Elaeocarpus reticulatus]
          Length = 488

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|42558884|sp|Q9LA80|ATPB_GEOTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|7578511|gb|AAF64075.1|AF147781_1 ATP synthase beta subunit [Geobacillus thermoleovorans]
          Length = 473

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID +  + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPLA
Sbjct: 291 RI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|148546740|ref|YP_001266842.1| flagellum-specific ATP synthase [Pseudomonas putida F1]
 gi|148510798|gb|ABQ77658.1| flagellar protein export ATPase FliI [Pseudomonas putida F1]
          Length = 451

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 231/429 (53%), Gaps = 15/429 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L + A+     ++ +V   G +  +  +      L     +G   +    +S      
Sbjct: 10  KRLGSYAEAIALPAQPIV--EGRLLRMVGLTLEAEGL--RAAVGSRCLVINDDSYHPVQV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+      V++ PVG    I+ G  V      GR          GRV++  G+ +DG
Sbjct: 66  EAEVMGFAGPKVFLMPVGSIVGIAPGARVVPLDDGGRL--PMGMSMLGRVLDGAGRALDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +   V   +NR  + K    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 KGGM-KAEDWVPMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    + +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G  E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  
Sbjct: 303 ERAGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR+  +   AD  +       L  R  ++RD+  +G Y  G D   D A+     + 
Sbjct: 363 ASISRVMPQVVDADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLV 422

Query: 415 DFLKQSPSD 423
           +FL+Q   +
Sbjct: 423 EFLRQGLGE 431


>gi|323715478|gb|ADY04807.1| ATP synthase beta subunit [Hydrangea serrata]
          Length = 482

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 66  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|25808465|gb|AAN74359.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808489|gb|AAN74371.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|30959122|gb|AAO73320.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|30959124|gb|AAO73321.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|25808399|gb|AAN74326.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 1   GVAANLEEDSVGVIVFGFGNNIKEGASVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 61  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIVGDKQTGKTTVA 119

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 120 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 179

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + RE++      P    +P  VF    RLLE
Sbjct: 180 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLE 239

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 240 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 299

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 300 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 350


>gi|186886269|gb|ACC93537.1| ATPase F1 alpha subunit [Juncus gracilicaulis]
          Length = 364

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 91/362 (25%), Positives = 156/362 (43%), Gaps = 18/362 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 7   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 66

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 67  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 125

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   VG++   V + ++     N    SV+V AT
Sbjct: 126 TAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANALDYSVLVAAT 185

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 186 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 245

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 246 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 305

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 306 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLDA 362

Query: 402 IL 403
             
Sbjct: 363 AT 364


>gi|94317178|gb|ABF14767.1| ATP1 [Hypseocharis pimpinellifolia]
          Length = 381

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 19/366 (5%)

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            I   G   EI  GDLV   G     P      GRV++ALG PIDG  +L   +    + 
Sbjct: 1   GIVVFGSDTEIQEGDLVKRTGSIVDVPAGKAMLGRVVDALGLPIDGKGALSDHE-RRRVE 59

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD- 188
            K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +     
Sbjct: 60  VKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKEMN 119

Query: 189 ----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
                       +   VG++   V + ++     +  + S++V AT+ +   L+ +AP +
Sbjct: 120 SRATSESETLYCVYVAVGQKRSTVAQLVQILSEASALEYSILVAATASDPAPLQFLAPYS 179

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER 
Sbjct: 180 GCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERA 239

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   
Sbjct: 240 AKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGL 299

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A     K++  SL   + ++ E   +     +   +D      +++   + +
Sbjct: 300 SVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 356

Query: 416 FLKQSP 421
            LKQ  
Sbjct: 357 VLKQPQ 362


>gi|255016050|ref|ZP_05288176.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. 2_1_7]
 gi|256842073|ref|ZP_05547578.1| ATP synthase F1, alpha subunit [Parabacteroides sp. D13]
 gi|301308753|ref|ZP_07214705.1| ATP synthase F1, alpha subunit [Bacteroides sp. 20_3]
 gi|256736389|gb|EEU49718.1| ATP synthase F1, alpha subunit [Parabacteroides sp. D13]
 gi|300833277|gb|EFK63895.1| ATP synthase F1, alpha subunit [Bacteroides sp. 20_3]
          Length = 525

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/446 (22%), Positives = 170/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             L Q  E    ++ ++  G +  ++     +  L       + +            V+ 
Sbjct: 12  SILRQQLEGIHTSIKLEEVGTVLQVSDGVARIYGL-DNAEANELLQFDNGME---AIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  GD V   GR   I  S    GRVI+ LG PIDG   +    
Sbjct: 68  LEEDNVGAVLLGPTDRIKEGDTVKRTGRIASIDVSEGMIGRVIDPLGNPIDGKGEILGET 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK      T++
Sbjct: 128 CEMPLERKAPGVIFRQPVNEPLQTGIKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +  +  +  +    I   +G++G  V   +           ++VV AT+ +   ++  AP
Sbjct: 188 NQRSNYEAGNPVYCIYVAIGQKGSTVAALVNTLQEKGAMDYTIVVSATASDPAAMQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDSGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQPEVAREMNDLPESMRDKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     +F E       GG 
Sbjct: 368 IFLETDLFNQGNRPAINVGISVSRVGGNAQLKAMKKVAGTLKIDQAQFRELESFSKFGGE 427

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +    + +       L Q  
Sbjct: 428 ---MDAVTAFTIDKGQKNTQLLIQPQ 450


>gi|253987519|ref|YP_003038875.1| F0F1 ATP synthase subunit beta [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253778969|emb|CAQ82129.1| membrane-bound ATP synthase F1 sector beta-subunit [Photorhabdus
           asymbiotica]
          Length = 460

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 188/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q   +  + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVQNGEAKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLSRGLSVTDLSHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEE-RWPIHRPAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVARARKIQRFLSQP 404


>gi|13518421|ref|NP_084781.1| ATP synthase CF1 beta subunit [Lotus japonicus]
 gi|23813722|sp|Q9BBU0|ATPB_LOTJA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13358962|dbj|BAB33179.1| ATPase beta subunit [Lotus japonicus]
          Length = 498

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 185/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      VT    +   + + ++ +G   D +GQ I +  ++        V   
Sbjct: 20  TGRIAQIIGPVLDVTFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAALSVPVGGVTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|289177573|gb|ADC84819.1| ATP synthase alpha chain [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 548

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 182/439 (41%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y+ +     + G++++       VT L       + +  +      LG   
Sbjct: 15  KALDDFVEAYTPSETPTQEVGHVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 70

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG+PIDG   + K 
Sbjct: 71  NLDAREIGVVILGDFVGIEEGQEVRRTGEVLSVPVGDGFLGRVVDPLGRPIDGMGEI-KS 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 130 EGRRILEAQAPDVMHRHPVDQPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 189

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 190 INQKKNWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEEAGAMEYTTIVASPASDSAGFK 249

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 250 YIAPYTGSAIGQHWMYNGKDVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 309

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 310 RLLERCARVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRP 369

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + R+       +   +   +D      +++
Sbjct: 370 AVDVGISVSRVGGAAQTKALKKVSGTLKISLARYRSLESFAM---FASDLDAASKAQLNR 426

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 427 GARLTELLKQPQFSPYSME 445


>gi|306992006|pdb|3OEH|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992007|pdb|3OEH|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992008|pdb|3OEH|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992015|pdb|3OEH|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992016|pdb|3OEH|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992017|pdb|3OEH|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992024|pdb|3OEH|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992025|pdb|3OEH|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
 gi|306992026|pdb|3OEH|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Beta-V279f
          Length = 484

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 16  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 75

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 76  LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 134

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 135 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 194

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 195 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 254

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 255 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAFGYQPTLATDMGLLQERI--TTTKKGSVTS 312

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 313 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 372

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 373 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 428

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 429 VFTGIPGKL 437


>gi|223667981|gb|ACN11586.1| F1-ATPase alpha subunit [Lecanorchis nigricans]
          Length = 424

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 161/407 (39%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGMGALSDHE-RRRVEVKAPGIIERQSVREPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
            + +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 FKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANAFSYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRGIIPAINVGLSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 399


>gi|170722854|ref|YP_001750542.1| flagellum-specific ATP synthase [Pseudomonas putida W619]
 gi|169760857|gb|ACA74173.1| flagellar protein export ATPase FliI [Pseudomonas putida W619]
          Length = 452

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 154/430 (35%), Positives = 231/430 (53%), Gaps = 7/430 (1%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--G 60
           K L   A+  +   + +V   G +  +  +      L   V     V++           
Sbjct: 10  KRLGGYAEAIKLPVQPVV--EGRLLRMVGLTLEAEGLRAPVGARCLVINDDSYHPVQVEA 67

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+      +++ PVG    I+ G  V       R+       GRV++  G+ +DG   +
Sbjct: 68  EVMGFAGSKIFLMPVGSIAGIAPGARVVPLDDSGRLPMGMSMLGRVLDGAGRALDGKGGM 127

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K +  + +   +   +NR  + +    GIR I+    +  GQR+G+FAG+G+GKS LL 
Sbjct: 128 -KAEDWVPMDGPIINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLG 186

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    + +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +  
Sbjct: 187 MMTRFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYC 246

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  KG NVLL++DS+TRFA + REIA   GE P  RGYP SVF++LP+L+ER G
Sbjct: 247 TRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAG 306

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             E   G+ITA  +VL +GD+  DPIADS R +LDGH VL+R LAEEG YP +D  AS+S
Sbjct: 307 NGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASIS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +   A+  +       L  R  ++RD+  +G Y  G D   D A+   P + DFL+
Sbjct: 367 RVMPQVVDANHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQPKLVDFLR 426

Query: 419 QSPSDLSSED 428
           Q   +    D
Sbjct: 427 QGLDENVGMD 436


>gi|34500002|gb|AAQ73583.1| ATP synthase beta subunit [Bibersteinia trehalosi]
          Length = 444

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTHKAIEVPVGTATLGRIMNVLGEPIDEAGPIGEEEA-WAIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +  + S+   V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHRVYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQDTLQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|33151292|ref|NP_872645.1| F0F1 ATP synthase subunit beta [Haemophilus ducreyi 35000HP]
 gi|81836085|sp|Q7VPP0|ATPB_HAEDU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33147512|gb|AAP95034.1| ATP synthase beta chain [Haemophilus ducreyi 35000HP]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGLVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR++N LG+PID    +G+ +   +I    P    +
Sbjct: 59  GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVSRARKIERFLSQP 401


>gi|170718139|ref|YP_001785168.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 2336]
 gi|226740206|sp|B0UWG5|ATPB_HAES2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|168826268|gb|ACA31639.1| ATP synthase F1, beta subunit [Haemophilus somnus 2336]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIIQIIGAVIDVEFPQNAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGSSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR++N LG+PID    +G  +    I    P    +
Sbjct: 59  GLKRGLKVENTGNPISVPVGTKTLGRIMNVLGEPIDEKGEIGAEEY-WAIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|156977320|ref|YP_001448226.1| F0F1 ATP synthase subunit alpha [Vibrio harveyi ATCC BAA-1116]
 gi|190358223|sp|A7N6Q6|ATPA2_VIBHB RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|156528914|gb|ABU73999.1| hypothetical protein VIBHAR_06106 [Vibrio harveyi ATCC BAA-1116]
          Length = 512

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L  +   N          G I S++    T+  L+  V  G+ +      
Sbjct: 1   MQLNSNEISELIRERIVNFNLESEARNEGTIVSVSDGIITIHGLAD-VMQGEMLELPN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRFALALNLERHSVGAVVMGPYADLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAVSF-DRMDPVEVIAPGVIDRKSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDC--FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKELGVKCIYVAIGQKASTIANVVRKLEEHGALENTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    + +     + + +KQ  
Sbjct: 413 LDEATRRQLDHGEKVTELMKQKQ 435


>gi|119896451|ref|YP_931664.1| F0F1 ATP synthase subunit beta [Azoarcus sp. BH72]
 gi|166201689|sp|A1K1S2|ATPB_AZOSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119668864|emb|CAL92777.1| ATP synthase beta chain [Azoarcus sp. BH72]
          Length = 466

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G+   +       GR+++ LG+PID    +   +
Sbjct: 52  LGDGVVRTIALGSSDGLRRGMKVSNTGKPISVPVGHGTLGRIMDVLGRPIDEAGPVETDE 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L   I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 LRA-IHQKAPKFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 231 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 348

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     +E   +  ++   + +++E RDI  I G           AV +   I  FL 
Sbjct: 349 QLDPLVVGEEHYSVARAVQQTLQKYKELRDIIAILGMDELS-PDDKLAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|7620563|gb|AAF64668.1| F1 ATPase alpha subunit [Ginkgo biloba]
          Length = 413

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/401 (22%), Positives = 163/401 (40%), Gaps = 23/401 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLEDENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +    +    + +K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPIDGKGASSDHE-RRRVEAKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRMNSKGTSDSEKLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     D L+ S++V AT+ +    + +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQIISEADALEYSIIVAATASDPAPPQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S      ++ E   +     +   +D       ++   + +
Sbjct: 356 SSKPESAQYRE---VAASAQFGSDLDAATQAPSNRGARLTE 393


>gi|296128924|ref|YP_003636174.1| ATP synthase F1, alpha subunit [Cellulomonas flavigena DSM 20109]
 gi|296020739|gb|ADG73975.1| ATP synthase F1, alpha subunit [Cellulomonas flavigena DSM 20109]
          Length = 542

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 93/447 (20%), Positives = 176/447 (39%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L    + Y     +  + G ++        V  L       + +  +      LG  +
Sbjct: 13  SALDSFVKSYEPKGPVTEEVGRVTLAADGIAQVEGL-PGAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    ++    + GRV++ LG+PIDG   +   
Sbjct: 69  NLDVREIGVVVLGEFTGIEEGQEVRRTGEVLSVAVGDGYLGRVVDPLGQPIDGLGEV-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 128 EARRALELQAPGVMARKSVHEPLQTGLKAIDSMIPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  D  D     + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQKANWDSGDPTKQVRCIYVAIGQKGSTIASVRSALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPVIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K++  +L   + ++           +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQVKAMKQVSGTLKLDLAQYRSLE---AFAMFASDLDAASRAQLTR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   S    E+    I  
Sbjct: 425 GARLMELLKQGQYSPYPVENQVASIWA 451


>gi|209883747|ref|YP_002287604.1| ATP synthase F1, beta subunit [Oligotropha carboxidovorans OM5]
 gi|226740656|sp|B6JD09|ATPB_OLICO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|209871943|gb|ACI91739.1| ATP synthase F1, beta subunit [Oligotropha carboxidovorans OM5]
          Length = 476

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 186/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +    +    + +V   +    V    +   E 
Sbjct: 7   QVGRITQVIGAVVDVQFDGYLPAILNAIETTNQGHRLVLEVAQHLGESTVRAIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   ++       GR++N +G+P+D    + K D +  I  + P    + 
Sbjct: 67  LVRGQEVTDTGAPIKVPVGEGTLGRIMNVVGEPVDEGGPV-KADGTRAIHQEAPAYTEQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    LT +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLVVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 EHYQTARMVQQVLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQP 415


>gi|119368002|dbj|BAF40490.1| ATP synthase beta subunit [Malpighia glabra]
          Length = 489

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|257853486|gb|ACV71745.1| ATP synthase beta subunit [Ochthocosmus longipedicellatus]
          Length = 482

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFTPGKMPNIYNALVVRG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +  G  S  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVDTGTTS-PIHRAAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEDNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|260868534|ref|YP_003234936.1| flagellum-specific ATP synthase FliI [Escherichia coli O111:H- str.
           11128]
 gi|257764890|dbj|BAI36385.1| flagellum-specific ATP synthase FliI [Escherichia coli O111:H- str.
           11128]
 gi|323180806|gb|EFZ66346.1| flagellar protein export ATPase FliI [Escherichia coli 1180]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|212896624|gb|ACJ38515.1| membrane-bound ATP synthase subunit B [Macroptilium atropurpureum]
          Length = 469

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    + +   +  I    P
Sbjct: 62  MSATDGLKRGMEVIDTGTPLNVPVGGATLGRIFNVLGEPIDNLGPV-ETRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 TFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|171742081|ref|ZP_02917888.1| hypothetical protein BIFDEN_01186 [Bifidobacterium dentium ATCC
           27678]
 gi|283456793|ref|YP_003361357.1| ATP synthase subunit alpha [Bifidobacterium dentium Bd1]
 gi|306822064|ref|ZP_07455448.1| ATP synthase F1 sector alpha subunit [Bifidobacterium dentium ATCC
           27679]
 gi|309802566|ref|ZP_07696670.1| ATP synthase F1, alpha subunit [Bifidobacterium dentium JCVIHMP022]
 gi|171277695|gb|EDT45356.1| hypothetical protein BIFDEN_01186 [Bifidobacterium dentium ATCC
           27678]
 gi|283103427|gb|ADB10533.1| ATP synthase alpha chain [Bifidobacterium dentium Bd1]
 gi|304554664|gb|EFM42567.1| ATP synthase F1 sector alpha subunit [Bifidobacterium dentium ATCC
           27679]
 gi|308220630|gb|EFO76938.1| ATP synthase F1, alpha subunit [Bifidobacterium dentium JCVIHMP022]
          Length = 542

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 179/439 (40%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y  +     + GY+++       VT L       + +  +      LG   
Sbjct: 13  KALDDFVESYKPSDTPTQEVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + K 
Sbjct: 69  NLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGEI-KT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDEPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 188 INQKRNWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEEAGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      +++
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLNR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GSHLTELLKQPQFSPYSME 443


>gi|167617532|ref|ZP_02386163.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis
           Bt4]
          Length = 423

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 148/417 (35%), Positives = 222/417 (53%), Gaps = 16/417 (3%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVGIGEEISLGDLVFHW- 90
           +  +   + +G     +     +L     +V+    + +++ P      +  G  V+   
Sbjct: 2   LEAIGLRLSVGAECTIELPAGSSLPYAQAEVVGFAGERLFLMPTTAVAGVLPGARVWPLE 61

Query: 91  ---------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
                    G  R+       GRV++A G+P+D    L    +   + +     ++R+ +
Sbjct: 62  SAPVADPLAGAKRLPVGWELLGRVVDASGRPLDNLGPL-ASKVDAPLTAPSINPLDREPI 120

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
                 G+R I+    +  GQR+G+FAGSG+GKS LL   AR    + ++I L+GERGRE
Sbjct: 121 HHVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGRE 180

Query: 202 VREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V+EFI +    D L +SVVV A +D SP+LR      A T+AEYF  +G +VLL++DS+T
Sbjct: 181 VKEFIEQILGEDGLARSVVVAAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLT 240

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A + REIA   GE P  +GYP SVF++LP L+ER G   +  G+ITA  +VL +GD+ 
Sbjct: 241 RYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQ 300

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPIADS R+ILDGHIVL+RSLAE G YP +D  AS+SR           + V     ++
Sbjct: 301 QDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQML 360

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            R++  RD+  +G Y PG D  LD+A+   P I  FL+Q   + +           L
Sbjct: 361 SRYQRNRDLIAVGAYAPGRDAQLDRAIALYPRIESFLQQGFRECAPYAPSLAALDAL 417


>gi|145588215|ref|YP_001154812.1| F0F1 ATP synthase subunit beta [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189081337|sp|A4SUT4|ATPB_POLSQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145046621|gb|ABP33248.1| ATP synthase F1 subcomplex beta subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 466

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I   +V    +G  + +  G  V   G+   +       GR+++ LG+PID    +   +
Sbjct: 53  IGDGVVRAIAMGASDGLRRGMEVKSTGKPISVPVGPATLGRIMDVLGRPIDDAGPIATEE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 -RRAIHQPAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAEAFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G++T++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 350 QLDPQVVGQEHYEVARDVQMTLQRYKELRDIIAILGMDELS-PEDKLAVSRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|22651728|gb|AAM26936.1| ATP synthase beta subunit [Drosera capensis]
          Length = 475

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      VT     +  + + +V +G   D LGQ I +  ++        V    
Sbjct: 5   GRISQIIGPVLDVTFPPGKMPYIYNALVVRG--RDTLGQPINVTCEVQQLLGNNRVRTVA 62

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V   G    +   +   GR+ N LG+PID    +   D +  I    P
Sbjct: 63  MSATNGLMRGMEVVDTGAALSVPVGSLTLGRIFNVLGQPIDNLGPV-ATDTTSPIHRSPP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---V 190
             +  +     F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +         
Sbjct: 122 AFIQLETKLSIFETGIKVVDLLAPYRRGGKTGLFGGAGVGKTVLIMELINNIAKAHRGVS 181

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFAGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPNIVGDEHYETAQQVKQTLQRYKEVQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|157158932|ref|YP_001463243.1| flagellum-specific ATP synthase [Escherichia coli E24377A]
 gi|191168300|ref|ZP_03030093.1| flagellar protein export ATPase FliI [Escherichia coli B7A]
 gi|218689936|ref|YP_002398148.1| flagellum-specific ATP synthase [Escherichia coli ED1a]
 gi|256017866|ref|ZP_05431731.1| flagellum-specific ATP synthase [Shigella sp. D9]
 gi|300920160|ref|ZP_07136610.1| flagellar protein export ATPase FliI [Escherichia coli MS 115-1]
 gi|309795952|ref|ZP_07690365.1| flagellar protein export ATPase FliI [Escherichia coli MS 145-7]
 gi|332278892|ref|ZP_08391305.1| flagellum-specific ATP synthase [Shigella sp. D9]
 gi|157080962|gb|ABV20670.1| flagellar protein export ATPase FliI [Escherichia coli E24377A]
 gi|190901672|gb|EDV61428.1| flagellar protein export ATPase FliI [Escherichia coli B7A]
 gi|218427500|emb|CAR08395.2| flagellum-specific ATP synthase [Escherichia coli ED1a]
 gi|300412817|gb|EFJ96127.1| flagellar protein export ATPase FliI [Escherichia coli MS 115-1]
 gi|308120402|gb|EFO57664.1| flagellar protein export ATPase FliI [Escherichia coli MS 145-7]
 gi|323183925|gb|EFZ69312.1| flagellar protein export ATPase FliI [Escherichia coli 1357]
 gi|332101244|gb|EGJ04590.1| flagellum-specific ATP synthase [Shigella sp. D9]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGTETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|16129888|ref|NP_416451.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|74312481|ref|YP_310900.1| flagellum-specific ATP synthase [Shigella sonnei Ss046]
 gi|89108773|ref|AP_002553.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           W3110]
 gi|157161412|ref|YP_001458730.1| flagellum-specific ATP synthase [Escherichia coli HS]
 gi|161367587|ref|NP_288402.2| flagellum-specific ATP synthase [Escherichia coli O157:H7 EDL933]
 gi|168751870|ref|ZP_02776892.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758255|ref|ZP_02783262.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764433|ref|ZP_02789440.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771548|ref|ZP_02796555.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777368|ref|ZP_02802375.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783338|ref|ZP_02808345.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4076]
 gi|168790299|ref|ZP_02815306.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC869]
 gi|168802288|ref|ZP_02827295.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC508]
 gi|170019726|ref|YP_001724680.1| flagellum-specific ATP synthase [Escherichia coli ATCC 8739]
 gi|170081585|ref|YP_001730905.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188493364|ref|ZP_03000634.1| flagellar protein export ATPase FliI [Escherichia coli 53638]
 gi|193066385|ref|ZP_03047433.1| flagellar protein export ATPase FliI [Escherichia coli E22]
 gi|193071153|ref|ZP_03052077.1| flagellar protein export ATPase FliI [Escherichia coli E110019]
 gi|194429929|ref|ZP_03062439.1| flagellar protein export ATPase FliI [Escherichia coli B171]
 gi|194439572|ref|ZP_03071645.1| flagellar protein export ATPase FliI [Escherichia coli 101-1]
 gi|195939247|ref|ZP_03084629.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208810598|ref|ZP_03252474.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816723|ref|ZP_03257843.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820040|ref|ZP_03260360.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400005|ref|YP_002271057.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4115]
 gi|217328784|ref|ZP_03444865.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           TW14588]
 gi|218554521|ref|YP_002387434.1| flagellum-specific ATP synthase [Escherichia coli IAI1]
 gi|218695546|ref|YP_002403213.1| flagellum-specific ATP synthase [Escherichia coli 55989]
 gi|238901146|ref|YP_002926942.1| flagellum-specific ATP synthase [Escherichia coli BW2952]
 gi|253773110|ref|YP_003035941.1| flagellum-specific ATP synthase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254793591|ref|YP_003078428.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256022401|ref|ZP_05436266.1| flagellum-specific ATP synthase [Escherichia sp. 4_1_40B]
 gi|260844340|ref|YP_003222118.1| flagellum-specific ATP synthase FliI [Escherichia coli O103:H2 str.
           12009]
 gi|260855916|ref|YP_003229807.1| flagellum-specific ATP synthase FliI [Escherichia coli O26:H11 str.
           11368]
 gi|261227564|ref|ZP_05941845.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254612|ref|ZP_05947145.1| flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           FRIK966]
 gi|293410297|ref|ZP_06653873.1| flagellar protein export ATPase FliI [Escherichia coli B354]
 gi|300818639|ref|ZP_07098847.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|300822289|ref|ZP_07102430.1| flagellar protein export ATPase FliI [Escherichia coli MS 119-7]
 gi|300931154|ref|ZP_07146501.1| flagellar protein export ATPase FliI [Escherichia coli MS 187-1]
 gi|300951566|ref|ZP_07165399.1| flagellar protein export ATPase FliI [Escherichia coli MS 116-1]
 gi|300956543|ref|ZP_07168825.1| flagellar protein export ATPase FliI [Escherichia coli MS 175-1]
 gi|301029398|ref|ZP_07192492.1| flagellar protein export ATPase FliI [Escherichia coli MS 196-1]
 gi|307138608|ref|ZP_07497964.1| flagellum-specific ATP synthase [Escherichia coli H736]
 gi|307312473|ref|ZP_07592107.1| ATPase, FliI/YscN family [Escherichia coli W]
 gi|312973842|ref|ZP_07788014.1| flagellar protein export ATPase FliI [Escherichia coli 1827-70]
 gi|331642562|ref|ZP_08343697.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331647535|ref|ZP_08348627.1| flagellar protein export ATPase FliI [Escherichia coli M605]
 gi|331663437|ref|ZP_08364347.1| flagellar protein export ATPase FliI [Escherichia coli TA143]
 gi|331668632|ref|ZP_08369480.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
 gi|331683493|ref|ZP_08384094.1| flagellar protein export ATPase FliI [Escherichia coli H299]
 gi|2506213|sp|P52612|FLII_ECOLI RecName: Full=Flagellum-specific ATP synthase
 gi|1736607|dbj|BAA15766.1| flagellum-specific ATP synthase [Escherichia coli str. K12 substr.
           W3110]
 gi|1788251|gb|AAC75008.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|73855958|gb|AAZ88665.1| flagellum-specific ATP synthase [Shigella sonnei Ss046]
 gi|157067092|gb|ABV06347.1| flagellar protein export ATPase FliI [Escherichia coli HS]
 gi|169754654|gb|ACA77353.1| ATPase, FliI/YscN family [Escherichia coli ATCC 8739]
 gi|169889420|gb|ACB03127.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187767372|gb|EDU31216.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014164|gb|EDU52286.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488563|gb|EDU63666.1| flagellar protein export ATPase FliI [Escherichia coli 53638]
 gi|188999264|gb|EDU68250.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354924|gb|EDU73343.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4401]
 gi|189359728|gb|EDU78147.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365543|gb|EDU83959.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370203|gb|EDU88619.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC869]
 gi|189375695|gb|EDU94111.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC508]
 gi|192925970|gb|EDV80616.1| flagellar protein export ATPase FliI [Escherichia coli E22]
 gi|192955548|gb|EDV86027.1| flagellar protein export ATPase FliI [Escherichia coli E110019]
 gi|194412018|gb|EDX28330.1| flagellar protein export ATPase FliI [Escherichia coli B171]
 gi|194421481|gb|EDX37495.1| flagellar protein export ATPase FliI [Escherichia coli 101-1]
 gi|208725114|gb|EDZ74821.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731066|gb|EDZ79755.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740163|gb|EDZ87845.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161405|gb|ACI38838.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           EC4115]
 gi|209748380|gb|ACI72497.1| flagellum-specific ATP synthase [Escherichia coli]
 gi|209748382|gb|ACI72498.1| flagellum-specific ATP synthase [Escherichia coli]
 gi|209748384|gb|ACI72499.1| flagellum-specific ATP synthase [Escherichia coli]
 gi|217318131|gb|EEC26558.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str.
           TW14588]
 gi|218352278|emb|CAU98035.1| flagellum-specific ATP synthase [Escherichia coli 55989]
 gi|218361289|emb|CAQ98873.1| flagellum-specific ATP synthase [Escherichia coli IAI1]
 gi|222033680|emb|CAP76421.1| flagellum-specific ATP synthase [Escherichia coli LF82]
 gi|238861118|gb|ACR63116.1| flagellum-specific ATP synthase [Escherichia coli BW2952]
 gi|253324154|gb|ACT28756.1| ATPase, FliI/YscN family [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254592991|gb|ACT72352.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257754565|dbj|BAI26067.1| flagellum-specific ATP synthase FliI [Escherichia coli O26:H11 str.
           11368]
 gi|257759487|dbj|BAI30984.1| flagellum-specific ATP synthase FliI [Escherichia coli O103:H2 str.
           12009]
 gi|260448946|gb|ACX39368.1| ATPase, FliI/YscN family [Escherichia coli DH1]
 gi|281179003|dbj|BAI55333.1| flagellum-specific ATP synthase [Escherichia coli SE15]
 gi|291470765|gb|EFF13249.1| flagellar protein export ATPase FliI [Escherichia coli B354]
 gi|299877702|gb|EFI85913.1| flagellar protein export ATPase FliI [Escherichia coli MS 196-1]
 gi|300316643|gb|EFJ66427.1| flagellar protein export ATPase FliI [Escherichia coli MS 175-1]
 gi|300449193|gb|EFK12813.1| flagellar protein export ATPase FliI [Escherichia coli MS 116-1]
 gi|300461011|gb|EFK24504.1| flagellar protein export ATPase FliI [Escherichia coli MS 187-1]
 gi|300525172|gb|EFK46241.1| flagellar protein export ATPase FliI [Escherichia coli MS 119-7]
 gi|300528811|gb|EFK49873.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1]
 gi|306907644|gb|EFN38147.1| ATPase, FliI/YscN family [Escherichia coli W]
 gi|309702230|emb|CBJ01547.1| flagellum-specific ATP synthase [Escherichia coli ETEC H10407]
 gi|310332437|gb|EFP99672.1| flagellar protein export ATPase FliI [Escherichia coli 1827-70]
 gi|312946534|gb|ADR27361.1| flagellum-specific ATP synthase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315061241|gb|ADT75568.1| flagellum-specific ATP synthase [Escherichia coli W]
 gi|315136578|dbj|BAJ43737.1| flagellum-specific ATP synthase [Escherichia coli DH1]
 gi|320191915|gb|EFW66562.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           EC1212]
 gi|320641789|gb|EFX11177.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           G5101]
 gi|320647148|gb|EFX15981.1| flagellum-specific ATP synthase [Escherichia coli O157:H- str.
           493-89]
 gi|320652432|gb|EFX20730.1| flagellum-specific ATP synthase [Escherichia coli O157:H- str. H
           2687]
 gi|320658034|gb|EFX25796.1| flagellum-specific ATP synthase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658606|gb|EFX26300.1| flagellum-specific ATP synthase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320668504|gb|EFX35331.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323152728|gb|EFZ39000.1| flagellar protein export ATPase FliI [Escherichia coli EPECa14]
 gi|323158580|gb|EFZ44594.1| flagellar protein export ATPase FliI [Escherichia coli E128010]
 gi|323168940|gb|EFZ54620.1| flagellar protein export ATPase FliI [Shigella sonnei 53G]
 gi|323174680|gb|EFZ60300.1| flagellar protein export ATPase FliI [Escherichia coli LT-68]
 gi|323378182|gb|ADX50450.1| ATPase, FliI/YscN family [Escherichia coli KO11]
 gi|323937211|gb|EGB33491.1| ATPase FliI/YscN family protein [Escherichia coli E1520]
 gi|323940400|gb|EGB36591.1| ATPase FliI/YscN family protein [Escherichia coli E482]
 gi|323948355|gb|EGB44342.1| ATPase FliI/YscN family protein [Escherichia coli H120]
 gi|323961985|gb|EGB57584.1| ATPase FliI/YscN family protein [Escherichia coli H489]
 gi|323972759|gb|EGB67959.1| ATPase FliI/YscN family protein [Escherichia coli TA007]
 gi|324018849|gb|EGB88068.1| flagellar protein export ATPase FliI [Escherichia coli MS 117-3]
 gi|326344856|gb|EGD68603.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           1125]
 gi|330911747|gb|EGH40257.1| flagellum-specific ATP synthase FliI [Escherichia coli AA86]
 gi|331039360|gb|EGI11580.1| flagellar protein export ATPase FliI [Escherichia coli H736]
 gi|331043259|gb|EGI15397.1| flagellar protein export ATPase FliI [Escherichia coli M605]
 gi|331059236|gb|EGI31213.1| flagellar protein export ATPase FliI [Escherichia coli TA143]
 gi|331063826|gb|EGI35737.1| flagellar protein export ATPase FliI [Escherichia coli TA271]
 gi|331079708|gb|EGI50905.1| flagellar protein export ATPase FliI [Escherichia coli H299]
 gi|332093102|gb|EGI98166.1| flagellar protein export ATPase FliI [Shigella boydii 5216-82]
 gi|332343667|gb|AEE57001.1| flagellar protein export ATPase FliI [Escherichia coli UMNK88]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|186886311|gb|ACC93558.1| ATPase F1 alpha subunit [Juncus squarrosus]
          Length = 365

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 21/371 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGAPIDGKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214
            +      GK+ +          ++   + +     +   +G++   V + ++     N 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANA 177

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273
              SV+V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++   
Sbjct: 178 LDYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLL 237

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSI 331
              P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI
Sbjct: 238 RRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISI 297

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   +  
Sbjct: 298 TDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAA 354

Query: 392 IGGYRPGVDLI 402
              +   ++  
Sbjct: 355 FAQFGSDLEAA 365


>gi|119034703|gb|ABL59998.1| SctN [Lysobacter enzymogenes]
          Length = 450

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 152/423 (35%), Positives = 233/423 (55%), Gaps = 10/423 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL---GQVIRINLDIVYICPVG 76
           VV+ G ++         T L     +G+    +     +     +V+ ++     + P+G
Sbjct: 31  VVRVGKVAEAYGTMIRATGL--KAMIGELCELRSPRDRSFRLAAEVVGVSRQYTLLTPLG 88

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++    V   GR   +       GR+++A G  IDG    G   + M I +  P  
Sbjct: 89  ALDGVAHDTEVIATGRQASVRCGEGLLGRILDANGDAIDGRGGFGPT-VQMPIYAASPNP 147

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + RQ +++ F TG+R +D       GQR+G+FA +G GKSTLL M AR    D  +I+LV
Sbjct: 148 LARQLIDRPFATGVRALDTVITAGVGQRLGIFAVAGGGKSTLLGMLARGGDADVNVIALV 207

Query: 196 GERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV EFI D    + LKKS++VVATSD   + R  A   A  IAEYF  +G  V+L
Sbjct: 208 GERGREVNEFIHDNLGEEGLKKSIIVVATSDRPALERSRAAWVATAIAEYFRDRGKRVML 267

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA ++R++    GE P  RG+P SVFS++PRL ER G ++K  G+ITA  +VL
Sbjct: 268 LVDSVTRFARALRDVGLAIGEPPARRGFPPSVFSQMPRLFERAGNNDK--GSITAFYTVL 325

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           ++G++ +DP+A+ VRSILDGHIVL+R LA    YP +D L S+SR   +      ++   
Sbjct: 326 MEGEDGDDPVAEEVRSILDGHIVLSRKLAAAYHYPAIDVLVSLSRTMPRVADEAHQRAAG 385

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            L   + + ++   +  +G Y+ G D   D A+ ++  I   LKQS +DL+      +  
Sbjct: 386 QLRKYLAKHQDIELLLQLGEYKRGSDADADIAIEKIEPIRKLLKQSSNDLADYKQSIDAL 445

Query: 435 KKL 437
           ++L
Sbjct: 446 RRL 448


>gi|4995717|emb|CAB44232.1| H(+)-transporting ATP synthase [Muntingia calabura]
          Length = 488

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 116/421 (27%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G IS I      V   S  +       VV   K  D +GQ I +  ++        V   
Sbjct: 12  GRISQIIGPVLDVAFTSGKMPNIYNALVV---KGRDTIGQQINVTCEVQQLLGNNRVRAV 68

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D   S+     +  I    
Sbjct: 69  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGSVD-TRTTAPIHKPA 127

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 128 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 187

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 188 SVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTM 247

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 248 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 305

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 306 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 366 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 424

Query: 420 S 420
            
Sbjct: 425 P 425


>gi|331007044|ref|ZP_08330276.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC1989]
 gi|330419146|gb|EGG93580.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium
           IMCC1989]
          Length = 459

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 155/433 (35%), Positives = 234/433 (54%), Gaps = 12/433 (2%)

Query: 7   TLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG 60
           +L++  + Y          V  G +  +     T+  +  +  +G    V      +   
Sbjct: 7   SLSERLKSYQSFTAPAVEPVVEGRLLRVIG--LTMEAVGFHAAIGCPCSVIDDHGEELEA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           +V+  + D +++ PV   + +  G  V       ++  +    GRVI+ LG+PID   S+
Sbjct: 65  EVVGFSGDKLFLMPVKSIQGVRSGARVIPQKTDKKLIINQHLLGRVIDGLGQPIDDLGSI 124

Query: 120 GKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
              DL+            + R  + +    GIR I+   P+  GQR+G+FAGSG+GKS L
Sbjct: 125 PNDDLAPIKSAEQTRINPLQRAPIVEVLDVGIRAINALIPVGKGQRLGLFAGSGVGKSVL 184

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R    D V++ L+GERGREV+EFI      + LK++VVV + +DESP++R  A  
Sbjct: 185 LGMMTRFTTADVVVVGLIGERGREVKEFIEHSLGEEGLKRAVVVASPADESPLMRLRASQ 244

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAEY+  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF++LP+L+ER
Sbjct: 245 LASQIAEYYRDQGKDVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPQLVER 304

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G  +   G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +D   S
Sbjct: 305 AGNGKVGSGSITAFYTVLTEGDDLQDPIADSARAILDGHVVLSRQLAESGIYPAIDVEMS 364

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+          K +     L+  + + RD+  IG Y  G D  +D A+   P +  F
Sbjct: 365 ISRVMTSIVDKTHIKWLQRFKQLLANYYKNRDLINIGAYIKGSDNEVDLALEYFPRLQQF 424

Query: 417 LKQSPSDLSSEDV 429
           ++Q  SD    DV
Sbjct: 425 IQQDISDAVYCDV 437


>gi|225378697|ref|ZP_03755918.1| hypothetical protein ROSEINA2194_04367 [Roseburia inulinivorans DSM
           16841]
 gi|225209534|gb|EEG91888.1| hypothetical protein ROSEINA2194_04367 [Roseburia inulinivorans DSM
           16841]
          Length = 463

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 119/409 (29%), Positives = 191/409 (46%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVGIG 78
           G I+ I      +         + D +    K+   L  V+ ++     DIV    +G  
Sbjct: 6   GKITQIIGAVLDIKFTEGNLPEINDAIKVPTKDGKEL--VVEVSQHLGDDIVRCIAMGST 63

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N LG PID  D    G  +  I  K P    
Sbjct: 64  DGLVRGMDAIATGAPISVPVGENTLGRMFNVLGNPIDEIDP-PTGVETWPIHRKAPAFEE 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +   ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   
Sbjct: 123 QATSQEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTG 182

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG  +V
Sbjct: 183 VGERTREGNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKDV 242

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 243 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 300

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL RS+AE G YP VDPLAS SR+ D      E  +
Sbjct: 301 VYVPADDLTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLASTSRILDPRIIGQEHFE 360

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  I G     +      V++   +  FL Q 
Sbjct: 361 VARGVQEILQKYKELQDIIAILGMDELSEDD-KLVVNRARKVQRFLSQP 408


>gi|186886235|gb|ACC93520.1| ATPase F1 alpha subunit [Luzula campestris]
          Length = 362

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 18/363 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 2   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 62  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 120

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 121 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 181 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 240

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 241 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 300

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 301 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLDA 357

Query: 402 ILD 404
              
Sbjct: 358 AXQ 360


>gi|6687481|emb|CAB64951.1| ATP synthase beta subunit [Euthystachys abbreviata]
          Length = 498

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPRGKMPKIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|328545829|ref|YP_004305938.1| F0F1 ATP synthase subunit beta [polymorphum gilvum SL003B-26A1]
 gi|326415569|gb|ADZ72632.1| F0F1 ATP synthase subunit beta [Polymorphum gilvum SL003B-26A1]
          Length = 474

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/411 (26%), Positives = 185/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +    + +  + +V   +  + V    +   E + 
Sbjct: 7   GQITQVIGAVVDVKFDDHLPQILNSLEVDNQGTRLVLEVAQHLGENTVRTIAMDSTEGLV 66

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR++N +G+P+D    +   D    I  + P  + +   
Sbjct: 67  RGQKAVDTGEPIAVPVGDGTLGRIMNVIGEPVDEAGPI-PHDAKRAIHQEAPSFVEQSTE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 185

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 186 TREGNDLYWEMIESGVNKKGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   S  + LD   VLNR++AE+G YP VDPL S SR+ D     DE 
Sbjct: 304 QAVYVPADDLTDPAPASTFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPRIIGDEH 363

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 YTVARKVQETLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 413


>gi|320164979|gb|EFW41878.1| ATP synthase alpha subunit [Capsaspora owczarzaki ATCC 30864]
          Length = 490

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 86/413 (20%), Positives = 152/413 (36%), Gaps = 65/413 (15%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V I   G  + I
Sbjct: 53  ETGRVLSIGDGIARVYGL-RNVQAEEMVEF---SSGLRGMALNLETDNVGIVVFGNDKFI 108

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG PIDG  +  K      +  K P  + R+ 
Sbjct: 109 KEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGAF-KNVKRARVGIKAPGIIPRRS 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 168 VHEPMQTGIKAVDSLVPVGRGQRELIIGDRQTGKTAVAIDTIINQKRFNDGKDEKAKLYC 227

Query: 191 IISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I   +G++   + + +      +  K                                  
Sbjct: 228 IYVAIGQKRSTIAQLVRTLEQADAMKYT-------------------------------- 255

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
                       A + R+++      P    YP  VF    RLLER     ++   G++T
Sbjct: 256 ------------AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKLGGGSLT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A    
Sbjct: 304 ALPIIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQIKA 363

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  ++   + ++ E   +     +   +D    + +++   + + LKQ  
Sbjct: 364 MKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQELLNRGTRLTELLKQRQ 413


>gi|212896604|gb|ACJ38505.1| membrane-bound ATP synthase subunit B [Teramnus uncinatus]
          Length = 467

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|71733339|ref|YP_277280.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|118573721|sp|Q48BG5|ATPB_PSE14 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71553892|gb|AAZ33103.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 459

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  Q      L    ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMGSTE 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 61  GLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEE-RWGIHRPAPSFAEQ 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 AGGNDLLETGIKVIDLVCPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 298 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V++   I  FL Q 
Sbjct: 358 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVNRARKIQRFLSQP 403


>gi|322707678|gb|EFY99256.1| ATP synthase beta chain [Metarhizium anisopliae ARSEF 23]
          Length = 517

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 195/445 (43%), Gaps = 29/445 (6%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ--VIRIN-- 66
           L   ++ +  V  G I  +      V   +  +      +     +DN GQ  V+ ++  
Sbjct: 35  LNSRFASSASVGVGKIHQVIGAVVDVKFDTAKLP----AILNSLETDNNGQKLVLEVSQH 90

Query: 67  --LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
              ++V    +   E +  G      G    I       GR+IN  G PID    + K D
Sbjct: 91  LGENVVRCIAMDGTEGLVRGAKATDTGAPITIPVGPATLGRIINVTGDPIDERGPI-KTD 149

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S+ P  +++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 150 KFLPIHSEPPEFIDQSTSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 209

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 210 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGARARV 269

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 270 ALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 329

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 330 QERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 387

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +     + +  ++  ++  +DI  I G     +      V +   
Sbjct: 388 LDSTSRMLDPRIVGEEHYNTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARK 446

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL Q     +   VF  I  KL
Sbjct: 447 IQRFLSQP---FTVAQVFTGIEGKL 468


>gi|212896598|gb|ACJ38502.1| membrane-bound ATP synthase subunit B [Bituminaria bituminosa]
          Length = 467

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 60  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|130076702|gb|ABO31971.1| ATPase alpha subunit [Penthorum sedoides]
          Length = 420

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 159/391 (40%), Gaps = 22/391 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           VI+ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VIDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 184

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 305 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               +   +        ++   + +  KQ  
Sbjct: 362 AXAQFGSDLYAATQALPNRGARLTEVPKQPQ 392


>gi|330890268|gb|EGH22929.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. mori str.
           301020]
          Length = 459

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  Q      L    ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALEVQSAAGTTLEVQQQLGDGVVRTIAMGSTE 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 61  GLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATQE-RWGIHRPAPSFAEQ 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 298 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V++   I  FL Q 
Sbjct: 358 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVNRARKIQRFLSQP 403


>gi|293415251|ref|ZP_06657894.1| flagellar protein export ATPase FliI [Escherichia coli B185]
 gi|291432899|gb|EFF05878.1| flagellar protein export ATPase FliI [Escherichia coli B185]
          Length = 471

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 31  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 88

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 89  QRLFLMPLEEVEGVLPGARVYAKNISTEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 147

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 148 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINTLLTVGRGQRMGLFAGSGVGKSVLL 206

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 207 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 266

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 267 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 326

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 327 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 386

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 387 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 446

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 447 QQGIFERADWEASLQGLERIF 467


>gi|257439241|ref|ZP_05614996.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
 gi|257198283|gb|EEU96567.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165]
          Length = 470

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 183/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V      +  L + +    + ++   +V   ++   V    +   E +
Sbjct: 4   GTIIRVAGPVVDVKFTGGKLPALQEALTVTAEGTERTMEVAQHVDETTVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G            GR+ + LG+PIDG   +        I  K P    ++ 
Sbjct: 64  GKGMEVTATGHGLNAPVGEGTLGRMFDPLGRPIDGKGPVDDLP-HWPIHRKAPSFAEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 ATEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGCDLWGEMNASGVLNKTALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +    G+IT+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALMGRMPSAVGYQPTLANELGALQERI--TSTRDGSITSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPLAS SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 361 KVQATLQRYQELQDIIAILGMDELSEED-KLTVTRARKLQKFLSQP 405


>gi|212896612|gb|ACJ38509.1| membrane-bound ATP synthase subunit B [Pseudovigna argentea]
 gi|212896614|gb|ACJ38510.1| membrane-bound ATP synthase subunit B [Pueraria phaseoloides]
          Length = 470

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|119368014|dbj|BAF40502.1| ATP synthase beta subunit [Passiflora quadrangularis]
          Length = 487

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V  L  +   + + +V +G++S     +   +V ++  +  V    + 
Sbjct: 13  GHIAQIIGPVLDVAFLRGKMPNIYNALVIKGRDSIGQQSNVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 73  ATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDELGPVD-TRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+++AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALSMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 TGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QIVGSEHYKTAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|160881854|ref|YP_001560822.1| F0F1 ATP synthase subunit beta [Clostridium phytofermentans ISDg]
 gi|190358661|sp|A9KK92|ATPB_CLOPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160430520|gb|ABX44083.1| ATP synthase F1, beta subunit [Clostridium phytofermentans ISDg]
          Length = 472

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 117/419 (27%), Positives = 191/419 (45%), Gaps = 18/419 (4%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLD 68
           D +  L    G I+ I      +     +   + + +  +  + D L  V+     +  D
Sbjct: 3   DTNNKLKSGLGKITQIIGAVLDIKFAEGKLPEIYEAIKIKKNDGDTL--VVEVAQHLGDD 60

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +G  + +  G      G    +       GR+ N LG PID  ++  K      
Sbjct: 61  TVRCIAMGPTDGLVRGMDAEGTGAPISVPVGENTLGRMFNVLGNPIDEKEA-PKNVEYYP 119

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P    +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 120 IHRKAPAFEEQSTQTEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNIAT 179

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +    S+   VGER RE  +   + +    + K+ +V    +E P  R    LT +T+AE
Sbjct: 180 EHGGYSVFTGVGERTREGNDLYYEMIDSGVINKTTMVFGQMNEPPGARMRVGLTGLTMAE 239

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF  K   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 240 YFRDKSGKDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TST 297

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V +V V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D
Sbjct: 298 KNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIVELGIYPAVDPLESTSRMLD 357

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  K+   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 PRVVGEEHYKVARDVQEILQRYKELQDIIAILGMDELSEDD-KLLVARARKIQRFLSQP 415


>gi|4995095|emb|CAB44009.1| H(+)-transporting ATP synthase [Ceiba speciosa]
          Length = 486

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|5758914|gb|AAD50888.1| ATP synthase beta subunit [Sparganium eurycarpum]
          Length = 496

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDAVFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|25808467|gb|AAN74360.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IEMNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|15831934|ref|NP_310707.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|13362148|dbj|BAB36103.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str.
           Sakai]
 gi|326342351|gb|EGD66132.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str.
           1044]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|317046180|ref|YP_004072469.1| ATPase beta subunit [Corynocarpus laevigata]
 gi|309252897|gb|ADO60317.1| ATPase beta subunit [Corynocarpus laevigata]
          Length = 498

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      V     +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 20  SGRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|296446169|ref|ZP_06888117.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b]
 gi|296256363|gb|EFH03442.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b]
          Length = 478

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/434 (25%), Positives = 189/434 (43%), Gaps = 24/434 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G+I+ +      V        + + +    + +  + +V   +  + V    +   E
Sbjct: 5   TSTGHITQVIGAVVDVKFDDHLPEILNALETTNQGARLVLEVAQHLGENSVRTIAMDSTE 64

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+IN +G+P+D    + +      I    P    +
Sbjct: 65  GLVRGQAVTDTGAPISVPVGDEMLGRIINVIGEPVDEAGPI-QTTARRAIHQPAPSYAEQ 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+V+D+  P   G +IG+F G+G+GK+ ++     +         + + V
Sbjct: 124 ATEAQILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVIIMELINNIAKAHGGYSVFAGV 183

Query: 196 GERGREVREFIEDYLGDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           GER RE  +   + +   +            K+ +V    +E P  R    LT +T+AE 
Sbjct: 184 GERTREGNDLYHEMIEGGVNKKPENGSAAGSKAALVYGQMNEPPGARARVALTGLTVAED 243

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 244 FRDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTK 301

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V ++ V  D+  DP   +  + LD   VLNR++AE+G YP VDPL S SR+   A
Sbjct: 302 GSITSVQAIYVPADDLTDPAPAASFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLSPA 361

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +   +   + R++  +DI  I G     +      V +   I  FL Q    
Sbjct: 362 IVGEEHYDVARKVQSTLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQP--- 417

Query: 424 LSSEDVFQEITKKL 437
               +VF     KL
Sbjct: 418 FHVAEVFTGAPGKL 431


>gi|212896640|gb|ACJ38523.1| membrane-bound ATP synthase subunit B [Kummerowia stipulacea]
          Length = 470

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ + +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQLNVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|110805911|ref|YP_689431.1| flagellum-specific ATP synthase [Shigella flexneri 5 str. 8401]
 gi|110615459|gb|ABF04126.1| flagellum-specific ATP synthase [Shigella flexneri 5 str. 8401]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQHNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|4995063|emb|CAB43985.1| H(+)-transporting ATP synthase [Apeiba tibourbou]
          Length = 488

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|7708626|emb|CAB89984.1| ATP synthase beta subunit [Rubia tinctorum]
          Length = 489

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + D +V +GK  D +GQ I +  ++        V    
Sbjct: 12  GRIVQIIGPVLDVAFPPGKMPNIYDALVVKGK--DTVGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIGTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 425


>gi|6561662|gb|AAF17006.1|AF197674_1 ATPase alpha subunit [Tasmannia insipida]
          Length = 395

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 88/386 (22%), Positives = 159/386 (41%), Gaps = 19/386 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 6   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 66  GRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 124

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 125 TAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 184

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 185 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 244

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I DG I    
Sbjct: 245 PGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSET 304

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D
Sbjct: 305 ELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAALAQFGSDLD 361

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
            +     ++   + +  KQ   +  S
Sbjct: 362 AVTQALPNRGARLTEVPKQPQYEPLS 387


>gi|312967138|ref|ZP_07781356.1| flagellar protein export ATPase FliI [Escherichia coli 2362-75]
 gi|312288602|gb|EFR16504.1| flagellar protein export ATPase FliI [Escherichia coli 2362-75]
          Length = 457

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLESYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|226941914|ref|YP_002796988.1| AtpB [Laribacter hongkongensis HLHK9]
 gi|254808155|sp|C1D5G2|ATPB_LARHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226716841|gb|ACO75979.1| AtpB [Laribacter hongkongensis HLHK9]
          Length = 458

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 182/407 (44%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      +  + D +  +        Q  ++   +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVIDVEFPRDSIPRVYDALKVESTGLTLEVQ-QQLGDGVVRCIAMGSSD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG PID    +   +  M I    P     
Sbjct: 60  GLKRGLPVTNTGAAISVPVGTATLGRIMDVLGTPIDELGPVATEE-RMPIHRAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +    S+   V
Sbjct: 119 SASSELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFTGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYHEMKESNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+ +  ER+  ++   G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKFQERVASTKT--GSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     DE   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + +++E RDI  I G            V +   I  FL Q 
Sbjct: 357 RGVQMTLQKYKELRDIIAILGMDELS-ADDKLTVARARKIQRFLSQP 402


>gi|4995105|emb|CAB44014.1| H(+)-transporting ATP synthase [Dombeya sp. Chase 273]
          Length = 487

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  EI+   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEISALLGRMPSAVGYQPTLSTEMGTLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|14718234|gb|AAK72855.1| ATP synthase beta subunit [Stylobasium spathulatum]
          Length = 498

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257852984|gb|ACV71503.1| ATP synthase beta subunit [Rourea minor]
          Length = 488

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|254425580|ref|ZP_05039297.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
 gi|196188003|gb|EDX82968.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7335]
          Length = 528

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 109/422 (25%), Positives = 180/422 (42%), Gaps = 13/422 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             T   L E    +L ++  G ++++       T L   V   + V    +     G   
Sbjct: 33  FNTFDTLLEQSQVSLTLEEIGTVTAVGHGVAHATGL-PNVQAEELVRFPNQQ---FGIAF 88

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKG 122
            ++ + V I  +  G  +S G  V   GR           GRV++A G+P+DG   +   
Sbjct: 89  NLDKEEVGIVLLNNGSNLSAGCEVGRTGRVMDTPVGEGLLGRVLDATGQPLDGKGVVAYA 148

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    I    P  M+R  V +  +TGI+VID   P+  GQR  +      GK+ +     
Sbjct: 149 E-RRAIERPAPAIMDRASVSEPLQTGIKVIDALIPVGRGQRELILGDRQTGKTAIAIDTL 207

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES-PILRKMAPLTAVTI 241
            +      +   +G+R     + I D          +VV  S ES P L+ + P  A T+
Sbjct: 208 LNQQEVICVYCAIGQRSSTTAKLIADLRDRGAIDRCIVVVASGESTPGLQYITPYAATTM 267

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF  KG +VL++ D +T+ A + RE++      P    +P  +F    RLLER     
Sbjct: 268 AEYFMEKGQDVLIVYDDLTQHARAYRELSLLLKRPPGREAFPGDIFYLHARLLERSTRLC 327

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +    G++TA+  +  +  N +  I  ++ SI DG I L+ SL ++G +P VD   SVSR
Sbjct: 328 EALGGGSLTALPILETESGNLSGYIPTNLVSITDGQIYLSPSLFQKGIFPAVDVGISVSR 387

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +  +A     + +   L     +F+E  +    G     +D      + +   I + LKQ
Sbjct: 388 VGGRAQLPAYRAVTGDLRLTYSQFQELENFARFG---TRLDDASQTTLARGARIREVLKQ 444

Query: 420 SP 421
             
Sbjct: 445 PQ 446


>gi|194100109|ref|YP_002003249.1| ATP synthase subunit A [Neisseria gonorrhoeae NCCP11945]
 gi|193935399|gb|ACF31223.1| ATP synthase subunit A [Neisseria gonorrhoeae NCCP11945]
 gi|317165541|gb|ADV09082.1| F0F1 ATP synthase subunit alpha [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 468

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 93/396 (23%), Positives = 172/396 (43%), Gaps = 24/396 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G   + LG  + +  D V    +G  E I  GD V   GR   +       
Sbjct: 1   MQGEMLEFPG---NTLGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELV 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV++ALG+PIDG   +    L+  +    P  + R+ V++  +TG++ ID   P+  GQ
Sbjct: 58  GRVVDALGRPIDGKGPINTT-LTAPVEKIAPGVIARKSVDQPMQTGLKAIDSMIPVGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVV 219
           R  +      GK+ +   ++  +       I   +G++   +   +         + ++V
Sbjct: 117 RELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V AT+ E+  L+ +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIAD 326
             YP  VF    RLLER     + +             G++TA+  +     + +  +  
Sbjct: 237 EAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P ++   SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE- 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             +     +   +D    K +    ++ + +KQ   
Sbjct: 356 --LAAFSQFASDLDEATRKQLEHGEVVTELMKQKQF 389


>gi|186886301|gb|ACC93553.1| ATPase F1 alpha subunit [Juncus bufonius]
          Length = 356

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/355 (25%), Positives = 154/355 (43%), Gaps = 18/355 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 6   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGA 65

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 66  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 124

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   +       +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 125 IDTILNQKEMNSQGKESETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 184

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 185 APLQFLAPYSGCAMGEYFRDNGMHALMIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 244

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 245 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 304

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D
Sbjct: 305 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLD 356


>gi|145608354|ref|XP_360642.2| ATP synthase beta chain, mitochondrial [Magnaporthe oryzae 70-15]
 gi|145015832|gb|EDK00322.1| ATP synthase beta chain, mitochondrial [Magnaporthe oryzae 70-15]
          Length = 514

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/427 (26%), Positives = 192/427 (44%), Gaps = 20/427 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V    ++   + + +     N   + +V   +  ++V    +   E +
Sbjct: 45  GKIHQVIGAVVDVKFDTAKLPPILNALETTNNNQKLVLEVSQHLGENVVRCIAMDGTEGL 104

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G      G    I   +   GR++N  G PID    + K D  + I ++ P  + +  
Sbjct: 105 TRGAKAKDTGAPITIPVGSGTLGRIMNVTGDPIDERGPI-KTDKYLPIHAEAPEFVEQST 163

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 164 TAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGE 223

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           R RE  +   +         D   K  +V    +E P  R    LT +T+AE F ++G +
Sbjct: 224 RTREGNDLYHEMQETSVIQLDGESKVSLVFGQMNEPPGARARVALTGLTVAEQFRNEGQD 283

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V 
Sbjct: 284 VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTQKGSITSVQ 341

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      +  
Sbjct: 342 AVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHY 401

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           ++ + +  ++  ++  +DI  I G     +      V +   I  FL Q     +   VF
Sbjct: 402 EVATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP---FTVAQVF 457

Query: 431 QEITKKL 437
             I  KL
Sbjct: 458 TGIEGKL 464


>gi|37721019|gb|AAN32512.1| ATP synthase beta subunit [Maianthemum racemosum]
          Length = 494

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|194292869|ref|YP_002008776.1| flii: flagellar biosynthesis protein; flagellum-specific ATP
           synthase [Cupriavidus taiwanensis LMG 19424]
 gi|193226773|emb|CAQ72724.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP
           synthase [Cupriavidus taiwanensis LMG 19424]
          Length = 502

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 158/431 (36%), Positives = 227/431 (52%), Gaps = 25/431 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--------LGDFVVHQGKNSDNLGQVIRINLDIVYI 72
              G ++    +      L   V          G F            +V+    D +Y+
Sbjct: 47  RSCGRLTRAAGLVLEAVGLRLPVGSDCLIELPAGQFTTDSNAPRTAEAEVVGFGADRLYL 106

Query: 73  CPVGIGEEISLGDLVFHW---------------GRFRISPSACWCGRVINALGKPIDGDD 117
            P      +  G  V+                 G  R+   A   GRV++A G+P+DG  
Sbjct: 107 MPQSDVVGLLPGARVYPLEPSPQPAGISAPREPGSKRLPVGAGLLGRVLDAAGRPLDGLG 166

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L    + + +  +    + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 167 PLAAA-MEVPLAGEQINPLMRAPIETVLDTGVRAINGMLTVGRGQRMGLFAGSGVGKSVL 225

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D +++ L+GERGREV+EFIE+ LG +  ++SVVV A +D SP+LR     
Sbjct: 226 LGMMARYTSADVIVVGLIGERGREVKEFIENILGPEGRRRSVVVAAPADCSPLLRMQGAA 285

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AEYF  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 286 YATRLAEYFRDQGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPTLVER 345

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D  AS
Sbjct: 346 TGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDVEAS 405

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR        ++   V     L+ R++  RD+  +G Y PG D  LD A+   P +  F
Sbjct: 406 ISRAMTALIPHEQFGSVRRFKQLMSRYQRNRDLISVGAYVPGNDPELDLAIQLHPRMEAF 465

Query: 417 LKQSPSDLSSE 427
           L+Q   + +  
Sbjct: 466 LQQDIHERAGY 476


>gi|146309622|ref|YP_001190087.1| F0F1 ATP synthase subunit alpha [Pseudomonas mendocina ymp]
 gi|166990361|sp|A4Y189|ATPA_PSEMY RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145577823|gb|ABP87355.1| ATP synthase F1, alpha subunit [Pseudomonas mendocina ymp]
          Length = 514

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 99/442 (22%), Positives = 184/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   ++L         G I S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKQRIESLDVTAQARNEGTIVSVSDGIVRIYGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGSYLTLAEGMSAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     S  +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPINAA-ASDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L      +  D   + +   +G++   +   +           ++VV A++ ES  L+ 
Sbjct: 178 ALAVDAIINQKDSGIRCVYVAIGQKQSTIANVVRKLEEAGALANTIVVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER              G  + + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|162146520|ref|YP_001600979.1| F0F1 ATP synthase subunit beta [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209543481|ref|YP_002275710.1| F0F1 ATP synthase subunit beta [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|190358669|sp|A9H9A8|ATPB_GLUDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161785095|emb|CAP54639.1| ATP synthase subunit beta [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531158|gb|ACI51095.1| ATP synthase F1, beta subunit [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 493

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/454 (24%), Positives = 193/454 (42%), Gaps = 24/454 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M +  +  A +A   +       G ++ +      V        + D +         + 
Sbjct: 1   MSETTQNEAPVAAQGASQHSNIVGRVTQVRGAVVDVQFEGTLPHILDALHVTFNGQTVVL 60

Query: 61  QV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
           +V   I    V    +   + +  G  V   G +  +       GR++N +G+PID    
Sbjct: 61  EVAQEIGEHEVRCIAMDTTDGLMRGTEVVATGGQITVPVGPGTLGRILNVIGEPIDERGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + K D    I  K P    +    +   TGI+V+D+  P   G ++G+F G+G+GK+ ++
Sbjct: 121 V-KSDKRYPIHRKAPSFDEQAAATEILVTGIKVVDLLCPYLKGGKVGLFGGAGVGKTVII 179

Query: 179 SMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL----------KKSVVVVATSD 225
                +         + + VGER RE  +   +     +           K  +V    +
Sbjct: 180 QELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKLGEDTTEGSKVALVYGQMN 239

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    L+ +++AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  
Sbjct: 240 EPPGARARIALSGLSLAEYFRDEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQP 299

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VLNRS+AE
Sbjct: 300 TLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAE 357

Query: 345 EGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPL S SR  D      +  ++   +  ++  ++  +DI  I G     +   
Sbjct: 358 MGIYPAVDPLDSTSRSLDPKIVGEEHYQVARDVQRILQTYKSLQDIIAILGMDELSEDD- 416

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            + V +   I  FL Q        +VF     KL
Sbjct: 417 KQVVARARRIQRFLSQP---FHVAEVFTGAPGKL 447


>gi|25808455|gb|AAN74354.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  285 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 96/354 (27%), Positives = 157/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGK 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF   G + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHGRHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|333003037|gb|EGK22591.1| flagellar protein export ATPase FliI [Shigella flexneri VA-6]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 158/441 (35%), Positives = 237/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +  +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRSQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|300940396|ref|ZP_07154981.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
 gi|300454790|gb|EFK18283.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIELQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLESYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|119368022|dbj|BAF40514.1| ATP synthase beta subunit [Picrodendron baccatum]
          Length = 489

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 187/421 (44%), Gaps = 28/421 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           QG  +  I  V   V    +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 12  QGRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNSRVRTV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +      + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   +
Sbjct: 129 PAFIELDTKLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKNYGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  S LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKKGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRKLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S+   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPNIVSSKHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|4995852|emb|CAB44285.1| H(+)-transporting ATP synthase [Trochetiopsis erythroxylon]
          Length = 485

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|3850922|gb|AAC72153.1| ATP synthase beta subunit [Petrophile circinata]
          Length = 490

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|323715470|gb|ADY04803.1| ATP synthase beta subunit [Dichroa febrifuga]
          Length = 479

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 66  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|289066811|ref|YP_003434329.1| ATP synthase CF1 beta subunit [Vigna radiata]
 gi|259019998|gb|ACV90196.1| ATP synthase CF1 beta subunit [Vigna radiata]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     Q   + + +V  G   D +GQ I +  ++        V    
Sbjct: 21  GHIDQIIGPVLDVAFPPGQMPNIYNALVVTG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLKRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 TFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|110456680|gb|ABG74789.1| ATPase beta subunit [Jasminum abyssinicum]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   S  +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPSGKMPNIYNALVVQG--RDTVGQAINVTCEVQQLLGNNQVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6687548|emb|CAB64990.1| ATP synthase beta subunit [Erithalis fruticosa]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|320527155|ref|ZP_08028342.1| ATP synthase F1, beta subunit [Solobacterium moorei F0204]
 gi|320132483|gb|EFW25026.1| ATP synthase F1, beta subunit [Solobacterium moorei F0204]
          Length = 464

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 196/410 (47%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNL-GQV-IRINLDIVYICPVGI 77
              G I  +      +    +++  + + +  +  +  ++  +V   I  D+V    +  
Sbjct: 2   SVTGKIVQVIGPVIDIRFDPEHLPSINNAIKVKIDDQTSMTAEVAQHIGDDVVRCIAMSS 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G    +       GR+ N LG+PIDG   +      + I    P   
Sbjct: 62  TDGLVRGMECTDTGAPIEVPVGDEVLGRMFNVLGEPIDGLGEVS-AKHKLPIHRDAPTFA 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +Q   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     +++
Sbjct: 121 QQQTTSEILETGIKVIDLLCPYSKGGKIGLFGGAGVGKTVLMQELIHNIAIEHGGRSVVA 180

Query: 194 LVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +     + K +V+     +ESP  R    L+A+T+AEYF  +   +
Sbjct: 181 GVGERTREGNDMYHEMEESGVLKNTVLTYGQMNESPGARMRVALSALTMAEYFRDEEHQD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ RL ERI  +  +KG+IT+V 
Sbjct: 241 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGRLQERI--TSTDKGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EK 370
           ++ V  D+  DP   +  S LD  +VL+RS+A  G YP VDPL S SR+ D     D   
Sbjct: 299 AIYVPADDLTDPAPATTFSHLDARLVLDRSIAALGIYPAVDPLGSSSRMLDPLVIGDEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ R+ E +DI  I G     +    K V +   + +FL Q 
Sbjct: 359 EVARQVQQILQRYRELQDIIAILGMEELGEED-KKIVARARRVRNFLSQP 407


>gi|305671655|gb|ADM63137.1| ATP synthase beta subunit [Valeriana jatamansi]
          Length = 489

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVSDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TTKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPGIVGDKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|288803186|ref|ZP_06408621.1| ATP synthase F1, alpha subunit [Prevotella melaninogenica D18]
 gi|288334447|gb|EFC72887.1| ATP synthase F1, alpha subunit [Prevotella melaninogenica D18]
          Length = 527

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 92/430 (21%), Positives = 167/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +++     V  L +     + +  +      +  V+ +  D V    +G  E I
Sbjct: 29  EVGSVLTVSDGVARVYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCVLLGPTEGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +   D   M +  K P  + RQ
Sbjct: 85  KEGQSVKRTHRIASIRVNDNFLGRVVNPLGEAIDGKGEIDLTDSFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDAIINQKSFYEQGNPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   +++         +++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVATLVQNLKEHGAMPYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGYS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L+I D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVIYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINNQQEIAEKMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPECMKGYVRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQVKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDKVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|6686771|emb|CAB64690.1| ATP synthase beta subunit [Alseuosmia macrophylla]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|50288781|ref|XP_446820.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526129|emb|CAG59751.1| unnamed protein product [Candida glabrata]
          Length = 507

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 119/440 (27%), Positives = 197/440 (44%), Gaps = 25/440 (5%)

Query: 14  DYSKNLVVQGGYISSITSVYYTV----TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
            ++    +  G +S++      V    + L   +   +    QGK    + Q +    + 
Sbjct: 30  RFASTAALASGKVSAVIGAIVDVQFEESNLPAILNALEIKTPQGKLVLEVAQHLG--ENT 87

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G+ V   G    +       GR+IN +G+PID    +    L   I
Sbjct: 88  VRTIAMDGTEGLVRGEKVVDTGAPISVPVGRETLGRIINVIGEPIDERGPIN-SKLRKPI 146

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P    +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +    
Sbjct: 147 HADPPSFAEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKA 206

Query: 189 KVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAV 239
               S+   VGER RE  +   +         +   K  +V    +E P  R    LT +
Sbjct: 207 HGGFSVFTGVGERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGARARVALTGL 266

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI 
Sbjct: 267 TIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI- 325

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG++T+V +V V  D+  DP   +  + LD   VL+RS++E G YP VDPL S S
Sbjct: 326 -TTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVDPLDSKS 384

Query: 359 RLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           RL D A   +E   + + +   +  ++  +DI  I G     +      V +   I  FL
Sbjct: 385 RLLDAAVVGEEHYNVATKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFL 443

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q     +  +VF  I  KL
Sbjct: 444 SQP---FAVAEVFTGIEGKL 460


>gi|7708171|emb|CAB90030.1| ATP synthase beta subunit [Borago officinalis]
          Length = 489

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   L +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIVQIIGPVLDVAFRLGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|4995057|emb|CAB43981.1| H(+)-transporting ATP synthase [Abroma augustum]
          Length = 488

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|75332478|sp|Q95AF8|ATPB_ASPEL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943662|emb|CAD10757.1| ATP synthase, beta subunit [Aspidistra elatior]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|325525633|gb|EGD03407.1| F0F1 ATP synthase subunit beta [Burkholderia sp. TJI49]
          Length = 459

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 186/406 (45%), Gaps = 11/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V+G  +  I +V            + D ++  G       Q  ++   +V    +G  + 
Sbjct: 2   VEGKIVQCIGAVIDVEFPRESMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICLGASDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+++ LG+PID    + + +    I  K P      
Sbjct: 61  LRRGLTVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESETKRSIHQKAPAFDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL  
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V
Sbjct: 240 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      +   +  
Sbjct: 298 PADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 RVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 402


>gi|189017656|gb|ACD71497.1| F1-ATPase alpha subunit [Afrothismia foertheriana]
          Length = 407

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 86/396 (21%), Positives = 156/396 (39%), Gaps = 26/396 (6%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GD V   G     P      GR
Sbjct: 8   GEMVEFP---SGVKGIALNLEKENVGIVVFGSDTAIKDGDPVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L        +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGRGALASDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCF----------------DKVIISLVGERGREVREFIED 208
            +      GK+ +      +                      +   +G++   V + ++ 
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQNIPRAHPEAQLGTSETSPVYCVYVAIGQKRSTVAQLVQI 184

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               +  + ++++ AT+ +   L  +AP +   + EYF  K  + L+I D +++ A + R
Sbjct: 185 LPEAHALEYTILLAATASDPAPLLFLAPYSGCAMGEYFRDKSMHALIIYDDLSKQAVAYR 244

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIA 325
           +++      P    +P  VF    RLLER          G+ TA+  +     + +  I 
Sbjct: 245 QMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDRTGAGSSTALPVIETQAGDVSAYIP 304

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V  I DG I     L   G  P ++   SVSR+   A S   K++  S    + ++ E
Sbjct: 305 TNVIPITDGQICSETELFYRGLRPAINVGLSVSRVGSAAQSRAMKQVCGSSKLELAQYRE 364

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +     +   +D      +++   + +  KQ  
Sbjct: 365 ---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 397


>gi|171462853|ref|YP_001796966.1| ATP synthase F1, beta subunit [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226740659|sp|B1XSD4|ATPB_POLNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|171192391|gb|ACB43352.1| ATP synthase F1, beta subunit [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 466

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I   +V    +G  + +  G  V   G+   +       GR+++ LG+PID    +   +
Sbjct: 53  IGDGVVRAIAMGASDGLRRGMEVKSTGKPISVPVGPATLGRIMDVLGRPIDDAGPIATEE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 -RRAIHQPAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVIDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAEAFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G++T++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSVTSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 350 QLDPQVVGQEHYEVARDVQMTLQRYKELRDIIAILGMDELS-PEDKLAVSRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|18077605|emb|CAD11919.1| ATP synthase beta subunit [Quintinia verdonii]
          Length = 490

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|300994274|ref|ZP_07180826.1| flagellar protein export ATPase FliI [Escherichia coli MS 200-1]
 gi|300304939|gb|EFJ59459.1| flagellar protein export ATPase FliI [Escherichia coli MS 200-1]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMRGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|89112850|gb|ABD61037.1| ATPase alpha subunit [Oncidium sphacelatum]
          Length = 376

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 19/376 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    +  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 5   GIALNLENENVGIVVFGSDTAMKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 64

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 65  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELLIGDRQTGKTAIA 123

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 124 IDTILNQKQMNSRGTSESDTLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASD 183

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ MAP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 184 PAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 243

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 244 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 303

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 304 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQ 360

Query: 405 KAVHQVPIIYDFLKQS 420
             +++   + +  KQ 
Sbjct: 361 ALLNRGARLTEVPKQP 376


>gi|119368012|dbj|BAF40501.1| ATP synthase beta subunit [Adenia sp. Tokuoka 261]
          Length = 488

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATEGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLETKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 A+  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGAEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|114804272|ref|YP_762268.1| ATP synthase CF1 beta subunit [Morus indica]
 gi|122166798|sp|Q09X10|ATPB_MORIN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|78100324|gb|ABB20965.1| ATP synthase CF1 beta subunit [Morus indica]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVRQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|212896618|gb|ACJ38512.1| membrane-bound ATP synthase subunit B [Dumasia villosa]
          Length = 470

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 417


>gi|30351903|emb|CAD48104.1| ATP synthase beta subunit [Drimiopsis sp. MP H642]
          Length = 495

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6561681|gb|AAF17025.1|AF197693_1 ATPase alpha subunit [Galbulimima belgraveana]
          Length = 392

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 157/380 (41%), Gaps = 19/380 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 3   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 62

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 63  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 121

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 122 IDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASD 181

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 182 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 241

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 242 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 301

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D +  
Sbjct: 302 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQ 358

Query: 405 KAVHQVPIIYDFLKQSPSDL 424
              ++   + +  KQ   + 
Sbjct: 359 ALPNRGARLTEVPKQPQYEP 378


>gi|4995107|emb|CAB44017.1| H(+)-transporting ATP synthase [Eriolaena spectabilis]
          Length = 482

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|24215292|ref|NP_712773.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira interrogans serovar Lai str. 56601]
 gi|45657268|ref|YP_001354.1| hypothetical protein LIC11391 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24196389|gb|AAN49791.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira interrogans serovar Lai str. 56601]
 gi|45600506|gb|AAS69991.1| FliI [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
          Length = 454

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 147/415 (35%), Positives = 223/415 (53%), Gaps = 7/415 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICP 74
              + + G +  ++              +G+ +  Q  GK      +++     +  + P
Sbjct: 23  TETIRKSGKVIRVSGNVIYSEGP-PDSKIGELMDVQKSGKEGYLQCEIVGFEGHVYTLMP 81

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I     VF  GR   I       GRV+N +G+PID    +   +      ++VP
Sbjct: 82  LGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITKE-ERPPDNEVP 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++R  +     TG+R ID    +  GQR+G+F+GSG+GKS+LL M AR    D  +I+
Sbjct: 141 NPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIARYTDADINVIA 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           LVGERGREV EFI  D   + LKKSVV+ ATSD   + +    L A +IAEYF  +G +V
Sbjct: 201 LVGERGREVNEFIEIDLGKEGLKKSVVLAATSDAPKMEQVNCALLATSIAEYFRDQGKHV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
            L++DS+TRFA + REI+ ++ E P+ RG+ +SVFS+L +L+ER G + K  G IT   +
Sbjct: 261 NLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSG-TSKSGGTITGFYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL + D   DPIAD+VR  +DGHI+LNR LAE+  YP +D  AS+SR+  +    D+   
Sbjct: 320 VLTEADEMEDPIADAVRGYIDGHIILNRKLAEKNHYPAIDVPASLSRVMARIAPEDQNLR 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
              +  LI  +    ++  +  Y  G D  +D A+ +   I  +LKQ   + S+ 
Sbjct: 380 AGMIRELISVYNSAEELIRLNAYVSGSDPKVDLAIRKKDKIDRYLKQKIQERSTY 434


>gi|326797428|ref|YP_004315248.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1]
 gi|326548192|gb|ADZ93412.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1]
          Length = 458

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 192/408 (47%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +  +GK  + + +V + +   IV    +G  
Sbjct: 1   MSSGQIVQIIGAVIDVEFPRDNVPKVYDALTIEGK--ELVLEVQQQLGDGIVRTIAMGST 58

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V +  +   +       GR+++ LG PID    +G+ +    I    P   +
Sbjct: 59  EGMRRGLAVDNTNKAVSVPVGTKTLGRIMDVLGNPIDEKGPIGEEE-RWSIHRSAPSYAD 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 118 QSSSNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 177

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 178 VGERTREGNDFYHEMTESNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 238 FFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  S LD  +VL+R +A  G YP +DPL S SR  D      +   +
Sbjct: 296 YVPADDLTDPSPATTFSHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +    + V++   I  +L Q 
Sbjct: 356 ARGVQMVLQRYKELKDIIAILGMDELSEED-KQTVNRARKIQRYLSQP 402


>gi|301018209|ref|ZP_07182724.1| flagellar protein export ATPase FliI [Escherichia coli MS 69-1]
 gi|300399796|gb|EFJ83334.1| flagellar protein export ATPase FliI [Escherichia coli MS 69-1]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKIAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGTETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|301327728|ref|ZP_07220933.1| flagellar protein export ATPase FliI [Escherichia coli MS 78-1]
 gi|300845728|gb|EFK73488.1| flagellar protein export ATPase FliI [Escherichia coli MS 78-1]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFEHADWEASLQGLERIF 453


>gi|183206532|gb|ACC54464.1| ATP synthase beta subunit [Solenopsis minuta]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTHTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|157689166|gb|ABV65139.1| ATP synthase CF1 beta subunit [Quercus nigra]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      VT   + +       VV   K  D  GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVTFPPRKMPNIYNALVV---KGRDTAGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|114216112|gb|ABI54667.1| ATPase alpha subunit [Treubia lacunosa]
          Length = 378

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 163/382 (42%), Gaps = 20/382 (5%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           Y+K  V + G +  +      V  L++ +  G+ V      S   G  + +  + V I  
Sbjct: 2   YTKLQVDEIGRVVPVGDGIARVYGLNK-IQAGEMVEFA---SGVKGMALNLENENVGIVI 57

Query: 75  VGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
            G    I  GD+V   G    +       GRV++ALG PIDG  +L   +    +  K P
Sbjct: 58  FGSDTAIKEGDIVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALSAVE-RRRVEVKAP 116

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD 188
             + R+ V +  +TG++ +D   P+  GQR  +      GK      T+L+    +    
Sbjct: 117 GIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINAQGT 176

Query: 189 ------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
                   +   +G++   V + ++        + S++V AT+ +   L+ +AP +   +
Sbjct: 177 SDSEKLYCVYVAIGQKRSTVAQLVKILAEAGALEYSIIVAATASDPAPLQFLAPYSGCAM 236

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
            EYF   G + L+I D +++ + + R+++      P    +P  VF    RLLER     
Sbjct: 237 GEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMS 296

Query: 302 KE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVSR
Sbjct: 297 DQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGSRPAINVGLSVSR 356

Query: 360 LADKAWSADEKKLVSSLTHLIH 381
           +   A     K++  SL   + 
Sbjct: 357 VGSAAQLKAMKQVCGSLKLELA 378


>gi|34539475|gb|AAQ74621.1| F1-ATPase alpha subunit [Xeronema callistemon]
          Length = 417

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 163/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V   ++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGXGIXXVXGXNE-IQAGEXVEFA---SXVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV +ALG  IDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVXDALGVXIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPI 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 401


>gi|239993102|ref|ZP_04713626.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii ATCC 27126]
          Length = 461

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I      +      V        V +G  S    +V + +   +V    +G 
Sbjct: 1   MSQGKVVQIIGAVVDIEFPQDAVPRVYDALRVTEGDLSGLTLEVQQQLGGGVVRGIALGT 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G    +       GR+++ LG PID    +G+ +  M I  + P   
Sbjct: 61  TDGLKRGLAVENTGNPIMVPVGTKTLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 DQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 VARGVQTVLQRYKELKDIIAILGMDELSEED-KQVVSRARKIQRFLSQP 405


>gi|212896636|gb|ACJ38521.1| membrane-bound ATP synthase subunit B [Lespedeza bicolor]
          Length = 470

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|172059172|ref|YP_001806824.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria MC40-6]
 gi|226739982|sp|B1YQL4|ATPB_BURA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|171991689|gb|ACB62608.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MC40-6]
          Length = 464

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 188/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRESMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    + + + +  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|110456611|gb|ABG74738.1| ATPase beta subunit [Forsythia europaea]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQAINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718030|gb|AAK72756.1| ATP synthase beta subunit [Dialypetalanthus fuscescens]
          Length = 479

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|6687375|emb|CAB64930.1| ATP synthase beta subunit [Digitalis grandiflora]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ETRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708264|emb|CAB90058.1| ATP synthase beta subunit [Datisca cannabina]
          Length = 491

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 20  GRIAQIIGPVLDVAFPPGKMPNIYNALVVQG--RDTVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|212896644|gb|ACJ38525.1| membrane-bound ATP synthase subunit B [Lespedeza frutescens]
          Length = 469

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGDEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|212896642|gb|ACJ38524.1| membrane-bound ATP synthase subunit B [Campylotropis macrocarpa]
          Length = 470

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++  G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALIVNG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|224830568|gb|ACN66379.1| ATP synthase beta chain [Pycnarrhena celebica]
          Length = 489

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPKIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|20514385|gb|AAM23011.1| ATP synthase beta subunit [Strasburgeria robusta]
          Length = 487

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|302521946|ref|ZP_07274288.1| ATP synthase F1, alpha subunit [Streptomyces sp. SPB78]
 gi|302430841|gb|EFL02657.1| ATP synthase F1, alpha subunit [Streptomyces sp. SPB78]
          Length = 530

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/447 (19%), Positives = 173/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +++       +  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTTAGDGIARIEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    +  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGVEEGQPVTRTGEVLSVGVGDGYLGRVVDPLGIPIDGLGEIATS 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK      T+
Sbjct: 129 -GRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +             + + +V + + +    +
Sbjct: 188 INQRANWESGDPKKQVRCIYVAIGQKGSTIASVRSSLEEAGALEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDLGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + ++ E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRLDLAQYRELESFAAFG---SDLDAASKAQLAR 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ     +++ED    I  
Sbjct: 425 GQRLVELLKQDQYQPMATEDQVVSIWA 451


>gi|240851266|ref|YP_002972669.1| ATP synthase beta chain [Bartonella grahamii as4aup]
 gi|240268389|gb|ACS51977.1| ATP synthase beta chain [Bartonella grahamii as4aup]
          Length = 542

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 190/433 (43%), Gaps = 26/433 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I  +      V    +   + + +  +   +  + +V   +  + V    +   + + 
Sbjct: 69  GEIKQVIGAVVDVQFEGELPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLM 128

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G +  +       GR++N +G+P+D    +     +  I  + PP + +  +
Sbjct: 129 RGQKVVDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIPATK-TRSIHQEAPPYVEQSTI 187

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 188 SEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 247

Query: 199 GREVREFIEDYLGD-------------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +                  K  +V    +E P  R    L+ +TIAE F
Sbjct: 248 TREGNDLYYEMIESRVNVNPKENNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESF 307

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G
Sbjct: 308 RDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTG 365

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D   
Sbjct: 366 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLI 425

Query: 366 SADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             +E   +   +  ++ R+   +DI  I G     +      V +   I  FL Q     
Sbjct: 426 VGEEHYTVACQVQTILQRYRALQDIIAILGMDELSEDD-KLLVGRARKIERFLSQP---F 481

Query: 425 SSEDVFQEITKKL 437
              + F     KL
Sbjct: 482 HVAEAFTGSPGKL 494


>gi|295836488|ref|ZP_06823421.1| ATP synthase F1, alpha subunit [Streptomyces sp. SPB74]
 gi|197699019|gb|EDY45952.1| ATP synthase F1, alpha subunit [Streptomyces sp. SPB74]
          Length = 530

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/447 (19%), Positives = 173/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +++       +  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTTAGDGIARIEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    +  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGVEEGQPVTRTGEVLSVGVGDGYLGRVVDPLGTPIDGLGEIATS 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK      T+
Sbjct: 129 -GRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +             + + +V + + +    +
Sbjct: 188 INQRANWESGDPNKQVRCIYVAIGQKGSTIASVRSSLEEAGALEYTTIVASPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDLGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + ++ E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRLDLAQYRELESFAAFG---SDLDAASKAQLAR 424

Query: 410 VPIIYDFLKQSPS-DLSSEDVFQEITK 435
              + + LKQ     +++ED    I  
Sbjct: 425 GQRLVELLKQDQYRPMATEDQVVSIWA 451


>gi|6689111|emb|CAB65391.1| ATP synthase beta subunit [Rhynchoglossum notonianum]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPV-ETSTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|223667971|gb|ACN11582.1| F1-ATPase alpha subunit [Eriaxis rigida]
          Length = 421

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/404 (23%), Positives = 161/404 (39%), Gaps = 23/404 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIQEGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDALGVPIDGMGALSDHE-RRRVEVKAPGIIERQSVREPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N    S++V AT+ +   L+ MAP +   + EYF   G + L+I D +
Sbjct: 176 TVAQLVQILPEANAFSYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +    
Sbjct: 236 SKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 396


>gi|7708474|emb|CAB89923.1| ATP synthase beta subunit [Lavandula bipinnata]
          Length = 483

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     Q   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRIIQIIGPVLDVAFPPGQMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|15425594|emb|CAC60271.1| ATP synthase beta subunit [Quintinia quatrefagesii]
          Length = 489

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|296123334|ref|YP_003631112.1| ATPase, FliI/YscN family [Planctomyces limnophilus DSM 3776]
 gi|296015674|gb|ADG68913.1| ATPase, FliI/YscN family [Planctomyces limnophilus DSM 3776]
          Length = 443

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/420 (37%), Positives = 234/420 (55%), Gaps = 13/420 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQVIRINLDIVYICPVGIGEEI 81
            G I  +  +   V        LG        +       V+    D   + P+G    +
Sbjct: 17  TGRIDRVVGLTAAVVGF--PAPLGSRCAIDRDHGFPIEADVVGFRGDETLLMPLGELTGV 74

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQ 139
             G  V        ++  A   GR+I + G+ +D G   L       ++  K P  + R 
Sbjct: 75  RRGARVRLVESVPCVNVGAGLLGRIIGSRGEFLDEGSKPLLAH--RADLHGKPPGPLERP 132

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ K ++TG+R ID    L  GQR+G+FAGSG+GKSTLL   AR    D  +++L+GERG
Sbjct: 133 RIAKIWQTGVRAIDSLLTLGEGQRMGIFAGSGVGKSTLLGQIARHSSADINVVALIGERG 192

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+  D   + LK+SVV+VAT DE  ILR  A   A  IAE+F   G +V+L++DS
Sbjct: 193 REVREFLDRDLGPEGLKRSVVIVATGDEPAILRLRAAWMATAIAEHFRDLGQHVVLMMDS 252

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P  RGYP SVF+ LPRLLER G S    G+IT + +VLVDGD
Sbjct: 253 VTRFALAQREIGLAAGEPPATRGYPPSVFALLPRLLERSGCS--PAGSITGLYTVLVDGD 310

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+PI+D+VR ILDGHIVL+R LA++G++P +D L S+SR  +   + + ++   ++  
Sbjct: 311 DTNEPISDTVRGILDGHIVLSRKLAQQGQFPAIDVLQSISRSMNDITTTEHRQWALTVRQ 370

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           L+  +++  D+  IG Y+ G + ++D A+   P I  +L Q P +   +  F E    L+
Sbjct: 371 LLSSYQQNEDLISIGAYQNGSNALIDSAIQARPQILGYLGQKPQE---QTTFLESLSMLE 427


>gi|14718066|gb|AAK72774.1| ATP synthase beta subunit [Greyia radlkoferi]
          Length = 483

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|62902855|gb|AAY19342.1| ATP synthase beta subunit [Connarus championii]
          Length = 486

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 10  GRIAQIIGPVLDVDFPPXKMPNIYNALVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 66

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 67  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 126 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 185

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 186 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 245

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 246 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 304 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 364 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 422

Query: 420 S 420
            
Sbjct: 423 P 423


>gi|332143472|ref|YP_004429210.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226739971|sp|B4RS81|ATPB_ALTMD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|327553494|gb|AEB00213.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 461

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I      +      V        V +G  S    +V + +   +V    +G 
Sbjct: 1   MSQGKVVQIIGAVVDIEFPQDAVPRVYDALRVTEGDLSGLTLEVQQQLGGGVVRGIALGT 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G    +       GR+++ LG PID    +G+ +  M I  + P   
Sbjct: 61  TDGLKRGLTVENTGNPIMVPVGTKTLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 DQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 VARGVQTVLQRYKELKDIIAILGMDELSEED-KQVVSRARKIQRFLSQP 405


>gi|297559314|ref|YP_003678288.1| ATP synthase F1 subunit alpha [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843762|gb|ADH65782.1| ATP synthase F1, alpha subunit [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 546

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/439 (21%), Positives = 179/439 (40%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L +  + Y        + G ++        V  L       + +  +      LG   
Sbjct: 13  DALQRFVQSYEPEATRAEEVGTVTYSGDGIARVGGL-PSAMANELLQFEDG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            + +  + +  +G    I  G  V   G+   +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEIGEIGVVVLGDFTSIEEGQKVRRTGQLLSVPVGDNFLGRVVDPLGAPIDGKGEIEST 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +   E+  +    M R+ V +  +TGI+ ID  TP+  GQR  V      GK       +
Sbjct: 129 E-RRELELQAATVMERKPVHEPLQTGIKAIDSMTPVGRGQRQLVIGDRQTGKTAVCIDAI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +               + +V A + E+   +
Sbjct: 188 INQKANWESGDPDKQVRCIYVAIGQKGSTIAGVRGALEEAGAMEYTTIVAAPASEAAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   + +++  +G +VL++ D +T+ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSALGQHWMYEGKHVLIVFDDLTKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E  KG++TA+  +     + +  I  +V SI DG + L   L  +G+ P
Sbjct: 308 RLLERCAKLSDEMGKGSMTALPIIETKAGDVSAYIPTNVISITDGQVFLESDLFNQGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A +   KK+  +L   + ++ E         +   +D +  + + +
Sbjct: 368 AINVGVSVSRVGGAAQTKAMKKVSGTLRLGLAQYRELE---AFSAFGSDLDAVSKQQLER 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GARLMELLKQGQYSPFSME 443


>gi|212896646|gb|ACJ38526.1| membrane-bound ATP synthase subunit B [Desmodium barbatum]
          Length = 467

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|195183527|dbj|BAG66976.1| ATP synthase beta subunit [Noisettia orchidiflora]
          Length = 489

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTLGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|296313936|ref|ZP_06863877.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768]
 gi|296839474|gb|EFH23412.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768]
          Length = 465

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  +      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQVIGAVVDVEFPRDAIPHVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMSVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SATTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|283787579|ref|YP_003367444.1| ATP synthase subunit beta [Citrobacter rodentium ICC168]
 gi|282951033|emb|CBG90711.1| ATP synthase beta subunit [Citrobacter rodentium ICC168]
          Length = 460

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGDIGEEE-RWAIHRDAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P + GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSSVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|257069066|ref|YP_003155321.1| F0F1 ATP synthase subunit alpha [Brachybacterium faecium DSM 4810]
 gi|256559884|gb|ACU85731.1| ATP synthase F1 subcomplex alpha subunit [Brachybacterium faecium
           DSM 4810]
          Length = 541

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 96/412 (23%), Positives = 171/412 (41%), Gaps = 22/412 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S        V  L   V   + V  +      LG  + + L  + +  +G    I  
Sbjct: 33  GRVSEAADGIARVEGL-PNVMANELVRFEDG---TLGLALNLELREIGVVVLGEFSGIEE 88

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G+   +     + GRV++ +G PIDG   +        +  + P  M R+ V+
Sbjct: 89  GQEVRRTGQVLSVPVGDGYLGRVVDPVGAPIDGLGEIETV-GRRALELQAPGVMQRKAVK 147

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVII 192
           +  +TG++ ID  TP+  GQR  +      GK      T+L+  A  +  D     + I 
Sbjct: 148 EPLQTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIGIDTILNQKANWESGDPEKQVRCIY 207

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             VG++G  +         +     + +V A + +    + +AP T   I +++  +G +
Sbjct: 208 VAVGQKGSTIASVRATLEENGAMEYTTIVAAPASDPAGFKYIAPYTGSAIGQHWMYEGKH 267

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
           VL+I D +++ A + R ++      P    YP  VF    RLLER      E   G++T 
Sbjct: 268 VLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGGGSMTG 327

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +    ++ +  I  +V SI DG   L   L    + P VD   SVSR+   A +   
Sbjct: 328 LPIIETKANDVSAYIPTNVISITDGQCFLQSDLFNADQRPAVDVGISVSRVGGSAQTKAM 387

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           K +  +L   + ++   RD+     +   +D    + + +   + + LKQS 
Sbjct: 388 KSVSGTLKIDLAQY---RDLEAFAMFASDLDAASKQQLSRGARLMELLKQSQ 436


>gi|194291166|ref|YP_002007073.1| F0F1 ATP synthase subunit beta [Cupriavidus taiwanensis LMG 19424]
 gi|226740184|sp|B3R7L5|ATPB_CUPTR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|193225001|emb|CAQ71012.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus
           taiwanensis LMG 19424]
          Length = 467

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   +
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMAVKSTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIASDE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L   I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 LRA-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 350 QLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILGMDELS-PEDKLAVSRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|25808431|gb|AAN74342.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 155/354 (43%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ + P
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLTP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|264676472|ref|YP_003276378.1| ATP synthase F1 subunit beta [Comamonas testosteroni CNB-2]
 gi|299531206|ref|ZP_07044617.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44]
 gi|262206984|gb|ACY31082.1| ATP synthase F1, beta subunit [Comamonas testosteroni CNB-2]
 gi|298720789|gb|EFI61735.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44]
          Length = 469

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 186/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           VQG  +  I +V        Q   + D +  +G       Q  ++   +V    +G  + 
Sbjct: 4   VQGKIVQCIGAVVDVEFAHGQVPKVYDALKLEGSALTLEVQ-QQLGDGVVRTIALGSSDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG PID    + +  L+  I  K P      
Sbjct: 63  LKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQT-LTAAIHRKAPAYDELS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +T+AE F  +
Sbjct: 182 ERTREGNDFYHEMSDAGVVNQENLGESKVAMVYGQMNEPPGNRLRVALTGLTMAESFRDE 241

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT
Sbjct: 242 GKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKVGSIT 299

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGE 359

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  K+   +   + R++E RDI  I G    +       V +   I  FL Q 
Sbjct: 360 EHYKVARQVQGTLQRYKELRDIIAILGMDE-LAPEDKLTVARARKIQRFLSQP 411


>gi|167588564|ref|ZP_02380952.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Burkholderia ubonensis Bu]
          Length = 459

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 226/421 (53%), Gaps = 8/421 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
           V   G ++         T +     LG+    +      L  +V+  +     + P+G  
Sbjct: 39  VSVQGRVNHAVGQILNATGI--RARLGEICELRTPGQPTLLAEVVGFSRQTTLLTPLGDV 96

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +S    V   GR           GRV++ LG+P+D    +  G   +      P  + 
Sbjct: 97  AGLSPETTVVPSGREHVFPVGEGLYGRVLDGLGRPLDARGPV-TGAAWVSTQQDPPNPLA 155

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           RQ ++  F TG+RVID    L  GQR+G+FA SG+GKSTLL M AR    D  +I+LVGE
Sbjct: 156 RQMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTLLGMIARGARADVNVIALVGE 215

Query: 198 RGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFIE     +   +S+VVV+TSD   + R  + L A  IAE+F  +G  VLL++
Sbjct: 216 RGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSALVATAIAEHFRDEGKRVLLLV 275

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + RE+   SGE P  R +P S F+ LPRLLER G  +  +G+ITA+ +VLV+
Sbjct: 276 DSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLERAG--QGARGSITALYTVLVE 333

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD  +DPIA+ VRSILDGHIVL+R +A   RYP +D LAS+SR+     +   ++  + +
Sbjct: 334 GDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLASLSRVMPLVANRAHQQAAARV 393

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             LI +++E   +  IG YR G D + D A+     I  F  Q+  +    D       K
Sbjct: 394 RELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIAAFCAQASHEDVRFDALLARLTK 453

Query: 437 L 437
           L
Sbjct: 454 L 454


>gi|167627186|ref|YP_001677686.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667748|ref|ZP_04755326.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876292|ref|ZP_05249002.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189081334|sp|B0TWS7|ATPB_FRAP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167597187|gb|ABZ87185.1| ATP synthase F1, beta subunit [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254842313|gb|EET20727.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 458

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  +      V         + D +  +  N     Q  +I   +V    +G  +
Sbjct: 1   MSTGKIIQVIGAVIDVEFSRDNTPKVYDALNVKEANLVLEVQ-QQIGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G +V +      +       GR++N LG+PID    +   + +  I    P     
Sbjct: 60  GLRRGMVVENTNAPISVPVGHGTLGRIMNVLGEPIDEAGPIQYTE-TRSIHQAPPAYDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+V+D+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 ALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    L+ +TIAE F  +  +VL+
Sbjct: 179 GERTREGNDFYYEMKDSNVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLM 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  S LD  IVL+R +AE G YP VDPL S SR  D      D  +  
Sbjct: 297 VPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGHDHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++  ++ R++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 357 RAVQKVLQRYKELKDIIAILGMDELSDED-KRTVDRARKIQRFLSQP 402


>gi|25808503|gb|AAN74378.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ + P
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLTP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|330447292|ref|ZP_08310942.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491483|dbj|GAA05439.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 468

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 188/416 (45%), Gaps = 20/416 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  I      V      V        V   +N   + +V + +   +V    +G 
Sbjct: 1   MATGKIVQIIGAVVDVEFPQDSVPQVYDALHVDAKENGTLVLEVQQQLGGGVVRGIAMGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + GR   +       GR++N LG+PID    +G+ +    I    P   
Sbjct: 61  SDGLRRGLSVENTGRPIEVPVGNATLGRIMNVLGQPIDECGEIGEQE-RYAIHRAAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +  V +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 EQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDFYYEMQEAGVVNIENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERF 239

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G
Sbjct: 240 RDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D   
Sbjct: 298 SITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLV 357

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  L+ R++E +DI  I G     +    +AV +   I  FL Q 
Sbjct: 358 VGQEHYDIARGVQSLLQRYKELKDIIAILGMDELSEED-KQAVSRARKIERFLTQP 412


>gi|206558440|ref|YP_002229200.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia J2315]
 gi|226740103|sp|B4EEY9|ATPB_BURCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|198034477|emb|CAR50342.1| ATP synthase beta chain [Burkholderia cenocepacia J2315]
          Length = 464

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    +   D++  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPID-SDVTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|186886231|gb|ACC93518.1| ATPase F1 alpha subunit [Luzula wahlenbergii]
          Length = 356

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 18/357 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 4   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPIDGKGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 123 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 182

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 183 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 242

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 243 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 302

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D  
Sbjct: 303 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAA 356


>gi|157689162|gb|ABV65137.1| ATP synthase CF1 beta subunit [Oxalis latifolia]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVDFSPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATEGLMRGMEVIDTGGPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTXPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EFFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|269837450|ref|YP_003319678.1| ATP synthase F1, beta subunit [Sphaerobacter thermophilus DSM
           20745]
 gi|269786713|gb|ACZ38856.1| ATP synthase F1, beta subunit [Sphaerobacter thermophilus DSM
           20745]
          Length = 469

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 116/414 (28%), Positives = 193/414 (46%), Gaps = 13/414 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICP 74
              V  G I  IT     V      +        V +      + +V + +  D V    
Sbjct: 2   ATTVATGRIVQITGAVVDVEFPPDQLPDIYNALEVEREGEEPLVLEVQQHLGNDWVRTVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G   ++       GR+ N +G+P+D D    + D+   I    P
Sbjct: 62  MSSTDGLRRGMPVIDTGGPIKVPVGPATLGRIFNVVGRPVD-DGPPPQADVYYPIHRPAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               +    + F+TG++VID+  P   G + GVF G+G+GK+ ++    R+   +    S
Sbjct: 121 SFEEQSTDVEPFETGLKVIDLIAPFTKGGKTGVFGGAGVGKTVIIMELIRNIAAEHGGYS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +        K+V+V    +E P  R    LT +T+AEYF  +G
Sbjct: 181 VFTGVGERTREGTQLWGEMRESGVADKTVLVFGQMNEPPGARLRVGLTGLTMAEYFRDEG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  ++G+IT+
Sbjct: 241 RDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKRGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D++ DP   +  + LD  I L RS+AE+G +P VDPLAS SR+ D      +
Sbjct: 299 VQAVYVPADDYTDPAPATTFAHLDATISLERSIAEQGLFPAVDPLASTSRILDPNIVGQE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             ++   +  ++ R+ + +DI  I G     +      V +   I  FL Q   
Sbjct: 359 HYEVAREVQRVLQRYRDLQDIIAILGIEELSEDD-KLIVARARKIQRFLSQPMF 411


>gi|212896638|gb|ACJ38522.1| membrane-bound ATP synthase subunit B [Lespedeza cuneata]
          Length = 466

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 59  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|212896606|gb|ACJ38506.1| membrane-bound ATP synthase subunit B [Pueraria montana var.
           lobata]
          Length = 470

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVSDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVN-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|167626199|ref|YP_001676493.1| F0F1 ATP synthase subunit beta [Shewanella halifaxensis HAW-EB4]
 gi|189081345|sp|B0TQF4|ATPB_SHEHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167356221|gb|ABZ78834.1| ATP synthase F1, beta subunit [Shewanella halifaxensis HAW-EB4]
          Length = 458

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G +  +      V      V      ++      + G V+     +   +V    +G
Sbjct: 1   MSTGTVVQVIGAVVDVEFPHDAVPQ----IYDALEIKSEGLVLEVQQQLGGGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +   +   GR++N LG PID    +G+ +    I  + P  
Sbjct: 57  TSDGLRRGLEVVNSGSPISVPVGSATLGRIMNVLGDPIDECGEIGEQE-RYVIHREAPSY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 116 EDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + S +  ++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 354 DVASGVQTVLQRYKELKDIIAILGMDELSDED-KTTVARARKIEKYLSQP 402


>gi|116009025|gb|ABJ52181.1| AtpB [Phyllostachys edulis]
          Length = 495

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 181/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I  I      +T     +       VV   K+ D  G+ I +  ++        V 
Sbjct: 17  STGRIDKIIGPVLDITFPPGKLPYIYNALVV---KSRDTAGKQINVTCEVQQLLGNNRVR 73

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+PID    +     +  I  
Sbjct: 74  AVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHR 132

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 133 SAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 192

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P +R    LTA+
Sbjct: 193 GVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGVRMRVGLTAL 252

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 253 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 311

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 312 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 370

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 371 TMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 429

Query: 418 KQS 420
            Q 
Sbjct: 430 SQP 432


>gi|14717920|gb|AAK72703.1| ATP synthase beta subunit [Abatia parviflora]
          Length = 471

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 2   GHIAQIIGPVLDVAFLPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|160938927|ref|ZP_02086278.1| hypothetical protein CLOBOL_03821 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437890|gb|EDP15650.1| hypothetical protein CLOBOL_03821 [Clostridium bolteae ATCC
           BAA-613]
          Length = 507

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 100/405 (24%), Positives = 176/405 (43%), Gaps = 14/405 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  +      V  + ++   G+ V+ +       G V  I  + +     G    +
Sbjct: 29  ETGSVIWVGDGIAIVYGI-EHAMYGEIVIFENG---VKGMVQDIRRNEIGCILFGKDTGV 84

Query: 82  SLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V     R  +   + + GRV+NALG+PIDG  S+ + D  + +  + P  ++R+ 
Sbjct: 85  GQGTKVVRTRKRAGVPVGSGFLGRVVNALGEPIDGLGSVKEEDY-LPVEEEAPGIVDRKS 143

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGER 198
           V    +TGI  ID   P+  GQR  +      GK+++      +        I   +G++
Sbjct: 144 VGVPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAMDTILNQKGKDVVCIYVAIGQK 203

Query: 199 GREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + +      D +  ++V+ +T+ E+  L+ +AP     +AEYF  +G +VL+I D
Sbjct: 204 ASTVAKLVSTLKKNDAMDYTIVMSSTASEAAPLQYIAPYAGTAMAEYFMHQGKDVLIIYD 263

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLV 315
            +++ A + R ++      P    YP  VF    RLLER      EK  G+ITA+  +  
Sbjct: 264 DLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRLCDEKGGGSITALPIIET 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P V+   SVSR+   A +   KK   S
Sbjct: 324 QAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSVSRVGGAAQTKAMKKASGS 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + ++ E     +   +   +D    + +     + + LKQ 
Sbjct: 384 IRIDLAQYREME---VFTQFSSDLDEATKEQLAYGKRLMELLKQP 425


>gi|7688333|emb|CAB89744.1| ATP synthase beta subunit [Ternstroemia stahlii]
 gi|14718246|gb|AAK72861.1| ATP synthase beta subunit [Ternstroemia stahlii]
          Length = 455

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V  L  +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G   RE      +               K  +V    +E P  R    L A+T+A
Sbjct: 188 VFGGVGERXREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLXALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|6686914|emb|CAB64775.1| ATP synthase beta subunit [Boopis graminea]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5001597|gb|AAD37045.1|AF092119_1 ATP synthase beta subunit [Didymeles perrieri]
          Length = 494

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 17  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|323356861|ref|YP_004223257.1| F0F1-type ATP synthase, alpha subunit [Microbacterium testaceum
           StLB037]
 gi|323273232|dbj|BAJ73377.1| F0F1-type ATP synthase, alpha subunit [Microbacterium testaceum
           StLB037]
          Length = 543

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 169/447 (37%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L      Y        + G +         V  L   V   + +         LG   
Sbjct: 13  DALKDFVNAYEPTGAAATEVGAVVDAADGIAHVEGL-PGVMANELIRFADG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++ + V +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLDENEVGVVVLGEFSGIEAGQSVTRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEIATT 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 129 -GRRALELQAPGVMQRKSVHEPLQTGIKAIDAMIPVGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D       I   +G++G  +               + +V A + +    +
Sbjct: 188 INQKANWESGDVNKQVRCIYVAIGQKGSTIASVKGALEDAGAMEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYEGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + ++           +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGDAQVKSIKKVSGTLKLELAQYRSLE---AFAMFASDLDAASRRQLAR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   S    E+    I  
Sbjct: 425 GARLTELLKQPQYSPYPVEEQVVSIWA 451


>gi|313678541|ref|YP_004056281.1| ATP synthase F1 subunit beta [Mycoplasma bovis PG45]
 gi|312950454|gb|ADR25049.1| ATP synthase F1, beta subunit [Mycoplasma bovis PG45]
          Length = 487

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 118/406 (29%), Positives = 188/406 (46%), Gaps = 14/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G +  I      V      +   L   +++   N+  L     I  D V    +     +
Sbjct: 18  GKVVQIVGPVVDVHFPKGQLPSLLNALIINYNNNTYTLEVAQHIGDDTVRAVSMVSTSGL 77

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S G  V+  G    +       GR+ + LG PID         + M I +  P    +  
Sbjct: 78  SRGIDVYDTGAPISVPVGNKVLGRMFDVLGNPIDLKP--MPDTIKMPIHAPAPSYEEQST 135

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 136 ESEIFETGIKVIDLLVPYVKGGKIGLFGGAGVGKTVLVQELINNIAREHGGLSVFAGVGE 195

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   + L   + +K+ +V    +E P  R    LT +T+AEYF   +  +VLL 
Sbjct: 196 RTREGNDLYNEMLASGVLEKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKEKQDVLLF 255

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI      KG+IT+V +V V
Sbjct: 256 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIA--STNKGSITSVQAVYV 313

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R++A  G YP VDPL S SRL D      +  +   
Sbjct: 314 PADDLTDPAPATTFNHLDAKTVLDRNIAALGIYPAVDPLESSSRLLDPLVIGQEHYETAR 373

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ RF+E +DI  I G     +    K V +   I +FL Q 
Sbjct: 374 RVVSILQRFKELQDIIAILGIGELSEED-KKVVARARRIRNFLSQP 418


>gi|295100292|emb|CBK97837.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 470

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/419 (27%), Positives = 188/419 (44%), Gaps = 16/419 (3%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V     +   L + +    + ++   +V   +N   V    +   E +
Sbjct: 4   GKIIRVAGPVVDVQFTAGRLPALQEALTVTAEGTERTMEVAQHVNESTVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G            GR+ + LG+PIDG  S+        I  K P    ++ 
Sbjct: 64  GKGMEVTATGHGLTAPVGEATLGRMFDPLGRPIDGKGSVDDVP-HWPIHRKAPSFAEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 ATEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGCDLWGEMNASGVLNKTALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +    G+IT+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALMGRMPSAVGYQPTLANELGALQERI--TSTRDGSITSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPLAS SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            +   + R++E +DI  I G     +      V +   +  FL Q     S  + F  +
Sbjct: 361 KVQATLQRYQELQDIIAILGMDELGEED-KLTVTRARKLQKFLSQP---FSVAENFTGL 415


>gi|291283118|ref|YP_003499936.1| Flagellum-specific ATP synthase [Escherichia coli O55:H7 str.
           CB9615]
 gi|290762991|gb|ADD56952.1| Flagellum-specific ATP synthase [Escherichia coli O55:H7 str.
           CB9615]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVAFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|130076714|gb|ABO31977.1| ATPase alpha subunit [Tetracarpaea tasmanica]
          Length = 377

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 157/381 (41%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAILEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             S    + ++ E       G
Sbjct: 356 RGSSKLELAQYREVAAFAQFG 376


>gi|157689156|gb|ABV65134.1| ATP synthase CF1 beta subunit [Gunnera manicata]
          Length = 501

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ETRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4995761|emb|CAB44253.1| H(+)-transporting ATP synthase [Paramelhania decaryana]
          Length = 483

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALAMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|7708668|emb|CAB89988.1| ATP synthase beta subunit [Symplocos costata]
          Length = 488

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|238758094|ref|ZP_04619274.1| Flagellum-specific ATP synthase [Yersinia aldovae ATCC 35236]
 gi|238703632|gb|EEP96169.1| Flagellum-specific ATP synthase [Yersinia aldovae ATCC 35236]
          Length = 454

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 161/446 (36%), Positives = 242/446 (54%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L +L +  E  S++  + + G ++  T +    T L   + LG   + +    G+  +  
Sbjct: 9   LSSLDKFEERISQSTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDGGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-------HWGRFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+            ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARITSGGTSASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDENHYSQVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + SS D   +  K L
Sbjct: 426 QMEIFLQQGMFERSSYDDACQHLKSL 451


>gi|21633397|gb|AAM52173.1| ATP synthase beta subunit [Bonamia media]
          Length = 484

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   +D   +V ++  +  V    +   
Sbjct: 15  GRIVQIIGPVLDVAFPPGKMPKIYNALVVQGQDKEQTDVTCEVQQLLGNNRVRAVAMSDT 74

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 75  NGLKRGMQVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQ 133

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 134 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 193

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 194 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 253

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 254 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 311

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 312 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGI 371

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|294636873|ref|ZP_06715203.1| flagellar protein export ATPase FliI [Edwardsiella tarda ATCC
           23685]
 gi|291089903|gb|EFE22464.1| flagellar protein export ATPase FliI [Edwardsiella tarda ATCC
           23685]
          Length = 452

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 152/429 (35%), Positives = 229/429 (53%), Gaps = 15/429 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
             + G ++  T +    T L   + +G     +  +     D   +V+  N   +++ P+
Sbjct: 25  ARRYGKLTRATGLVLEATGL--QLPIGATCRVERHDGQQIIDVEAEVVGFNGRQLFLMPL 82

Query: 76  GIGEEISLGDLV------FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
              + I  G  V       H G+ ++       GRV++   +P+DG     + D    + 
Sbjct: 83  EEVDGIVPGARVWAPAAALHSGK-QLPLGPALLGRVLDGSARPLDGLPPPDESD-HGGLS 140

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           S+    + R  + +    G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D 
Sbjct: 141 SQPFNPLQRTPITQVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADV 200

Query: 190 VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           +++ L+GERGREV++FIE+ LG+   K+SVV+ A +D SP+LR      A  IAE F  +
Sbjct: 201 IVVGLIGERGREVKDFIENILGEEGRKRSVVIAAPADVSPLLRMQGAAYATRIAEDFRDR 260

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+IT
Sbjct: 261 GQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSIT 320

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +D  AS+SR         
Sbjct: 321 AFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAEAGHYPAIDIEASISRAMTSLIDEA 380

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
               V     L+  ++  RD+  +G Y  G D +LD+A+   P +  FL+Q   + S   
Sbjct: 381 HYVRVRRFKQLLSSYQRNRDLISVGAYARGSDPLLDQAIALYPQLEAFLQQGIFERSDYA 440

Query: 429 VFQEITKKL 437
                 + L
Sbjct: 441 QACNALQAL 449


>gi|238784728|ref|ZP_04628732.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
 gi|238714407|gb|EEQ06415.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
          Length = 454

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/446 (35%), Positives = 242/446 (54%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L ++ +  E  S++  + + G +   T +    T L   + LG   + +    G+  +  
Sbjct: 9   LASMDKFEERISQSTTIRRYGRLVRATGLVLEATGL--QLPLGATCLIERYDNGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+     G      ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARMTTGGASASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + SS +   +  K L
Sbjct: 426 QMEIFLQQGMYERSSYEDACQHLKSL 451


>gi|32265928|ref|NP_859960.1| F0F1 ATP synthase subunit beta [Helicobacter hepaticus ATCC 51449]
 gi|81835987|sp|Q7VJ21|ATPB_HELHP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|32261977|gb|AAP77026.1| FoF1-type ATP synthase [Helicobacter hepaticus ATCC 51449]
          Length = 466

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVV----HQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I+ +      V   S    + + +      +G+ ++ + +V     D  V    + + 
Sbjct: 3   GKITQVMGPVVDVEFSSYLPMINEAIDVNFDIEGRKNNLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V        +       GR+ N  G  IDG   L + DL   I  + P   N
Sbjct: 63  EGLIRGQEVKARGKPIEVPVGEAVLGRIFNVTGDVIDGGKPL-ESDLKWPIHREAPSFEN 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTRTEMFETGIKVVDLIAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VL+R ++E+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLDRKISEKGIYPAVDPLGSTSRILDPQIVGEEHHK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    + V +   I  FL Q 
Sbjct: 360 VATGVQQVLQKYKDLQDIIAILGMDELSEED-KQVVARARKIERFLSQP 407


>gi|158425749|ref|YP_001527041.1| F0F1 ATP synthase subunit beta [Azorhizobium caulinodans ORS 571]
 gi|190358256|sp|A8HS10|ATPB_AZOC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158332638|dbj|BAF90123.1| ATP synthase F1 beta subunit [Azorhizobium caulinodans ORS 571]
          Length = 478

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/434 (24%), Positives = 188/434 (43%), Gaps = 26/434 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I+ +      V   S    + + +    + +  + +V   +  + V    +   E +
Sbjct: 5   SGRITQVIGAVVDVQFDSHLPEILNALETTNQGNRLVLEVAQHLGENTVRTIAMDSTEGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N +G+ +D    +  G+    I  + P    +  
Sbjct: 65  VRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVV-GEAKRAIHQQAPSYSEQST 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 EAEMLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           R RE  +   + +   +              K  +V    +E P  R    LT +T+AE+
Sbjct: 184 RTREGNDLYHEMIESKVNVDPHENNGSSAGSKCALVYGQMNEPPGARARVALTGLTVAEH 243

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 244 FRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTK 301

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+    
Sbjct: 302 GSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPL 361

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +   +   + R++  +DI  I G     +      V +   I  FL Q    
Sbjct: 362 VIGEEHYNVARQVQQTLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP--- 417

Query: 424 LSSEDVFQEITKKL 437
               +VF     KL
Sbjct: 418 FHVAEVFTGSPGKL 431


>gi|149928159|ref|ZP_01916405.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Limnobacter sp. MED105]
 gi|149823144|gb|EDM82382.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Limnobacter sp. MED105]
          Length = 468

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 155/441 (35%), Positives = 226/441 (51%), Gaps = 29/441 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           +  G ++ +  +      L   V  G       K +  L  +V+  N D +++ P     
Sbjct: 22  IATGKLTRVAGLVMEAVGLKLPV--GSVCTVVQKGAPPLEAEVVGFNGDKLFLMPATDVH 79

Query: 80  EISLGDLVFHWGRFRI---------------------SPSACWCGRVINALGKPIDGDDS 118
            ++ G  V       I                            GRV+++ G+P+D    
Sbjct: 80  GMTPGAKVIAQEPPPIAPKLGVKAHPWRRPEDKTKHLPVGDSLLGRVVDSNGRPLDTLGE 139

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L K +    + ++    + R+ + +    G+R I+    +  GQRIG+ AGSG+GKS LL
Sbjct: 140 L-KFEKRSPLAARPINPLEREPITEPLDVGVRAINALLTVGRGQRIGLMAGSGVGKSVLL 198

Query: 179 SMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D+V++ L+GERGREV+EFI +    + LK+SVV+ A +D SP+LR      
Sbjct: 199 GMMARYTKADRVVVGLIGERGREVKEFIEQILGEEGLKRSVVIAAPADVSPLLRMQGAAY 258

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AE+F  +G NVL+I+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 259 TQVVAEHFRDQGHNVLMIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPTLVERA 318

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G   K  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D   S+
Sbjct: 319 GNGRKGAGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAIDIEQSI 378

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR       A        L     R +  RD+  +G Y PG D  LD ++   P I + L
Sbjct: 379 SRAMHNIVPAGHLNAARGLKAAFSRVQRNRDLITVGAYSPGADPQLDHSLALYPKIENLL 438

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           +QS  + +S   F E    LQ
Sbjct: 439 QQSMLESAS---FDEALAGLQ 456


>gi|212896622|gb|ACJ38514.1| membrane-bound ATP synthase subunit B [Lablab purpureus]
          Length = 470

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLKRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVN-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 TFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|223667973|gb|ACN11583.1| F1-ATPase alpha subunit [Erythrorchis altissima]
          Length = 414

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/394 (22%), Positives = 158/394 (40%), Gaps = 22/394 (5%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101
           +  G+ V      S   G  + +  + V I   G    I  GDLV   G     P     
Sbjct: 3   IKAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKRTGSIVDVPAGKAM 59

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  G
Sbjct: 60  LGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVREPMQTGLKAVDSLVPIGRG 118

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYL 210
           QR  +      GK+ +      +                 +   +G++   V + ++   
Sbjct: 119 QRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILP 178

Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
             N    S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R++
Sbjct: 179 EANAFSYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALMIYDDLSKQAVAYRQM 238

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADS 327
           +      P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +
Sbjct: 239 SLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTN 298

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           V  I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E  
Sbjct: 299 VIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE-- 356

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +     +   +D       ++   + +  KQ  
Sbjct: 357 -VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 389


>gi|218705434|ref|YP_002412953.1| flagellum-specific ATP synthase [Escherichia coli UMN026]
 gi|293405424|ref|ZP_06649416.1| fliI [Escherichia coli FVEC1412]
 gi|298381068|ref|ZP_06990667.1| fliI [Escherichia coli FVEC1302]
 gi|300899198|ref|ZP_07117474.1| flagellar protein export ATPase FliI [Escherichia coli MS 198-1]
 gi|218432531|emb|CAR13424.1| flagellum-specific ATP synthase [Escherichia coli UMN026]
 gi|291427632|gb|EFF00659.1| fliI [Escherichia coli FVEC1412]
 gi|298278510|gb|EFI20024.1| fliI [Escherichia coli FVEC1302]
 gi|300357179|gb|EFJ73049.1| flagellar protein export ATPase FliI [Escherichia coli MS 198-1]
          Length = 457

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISTEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|167762922|ref|ZP_02435049.1| hypothetical protein BACSTE_01286 [Bacteroides stercoris ATCC
           43183]
 gi|167699262|gb|EDS15841.1| hypothetical protein BACSTE_01286 [Bacteroides stercoris ATCC
           43183]
          Length = 528

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 99/450 (22%), Positives = 176/450 (39%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE +    +      + + G +  ++     +  L +     + +           
Sbjct: 15  LRKQLEGIDTRVQ------LDEIGTVLQVSDGVARIYGL-RNAEANELLEFDNG---IKA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G +V    R   I       GRVI+ LG+P+DG   +
Sbjct: 65  IVMNLEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIMVGEGMLGRVIDPLGEPLDGKGLI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
           G     M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 125 GGELCEMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 184

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            T+++  A  D  D    I   +G++G  V   +     +     ++VV AT+ +   L+
Sbjct: 185 DTIINQRANYDAGDPVYCIYVAIGQKGSTVASIVNTLRENGAMDYTIVVAATAGDPAALQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G + L++ D +++ A + RE++           YP  +F    
Sbjct: 245 YYAPFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 304

Query: 292 RLLERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER      +                     G++TA+  +     + +  I  +V SI
Sbjct: 305 RLLERAAKIINQEEVAREMNDLPESLKGRVKGGGSLTALPIIETQAGDVSAYIPTNVISI 364

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+ +L  +G  P +D   SVSR+   A     KK+  +L     ++ E      
Sbjct: 365 TDGQIFLDTNLFNQGNRPAIDVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---A 421

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +   +D +    + +       L Q  
Sbjct: 422 FTKFSGDMDPVTALTIDKGQKNTRLLVQPQ 451


>gi|167587928|ref|ZP_02380316.1| F0F1 ATP synthase subunit beta [Burkholderia ubonensis Bu]
          Length = 459

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 11/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V+G  +  I +V            + D ++ +G       Q  ++   +V    +G  + 
Sbjct: 2   VEGKIVQCIGAVIDVEFPRESMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICLGASDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V +  +   +       GR+++ LG+PID    + + + +  I  K P      
Sbjct: 61  LRRGLTVKNTNKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL  
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V
Sbjct: 240 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV-S 374
             D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     +E   +  
Sbjct: 298 PADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 RVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 402


>gi|139522556|gb|ABO77667.1| ATP synthase beta subunit [Lysipomia sphagnophila]
          Length = 498

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPSIYNALVVKG--RDTLGKPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +  G  S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEAAQNVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|7708197|emb|CAB90035.1| ATP synthase beta subunit [Coffea arabica]
          Length = 490

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V   +  +       VV   K  D +GQ I +  ++        V   
Sbjct: 14  GRIVQIIGPVLDVAFPAGKMPNIYNALVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 70

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D   ++     +  I    
Sbjct: 71  AMSSTDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGAVD-TRTTSPIHRSA 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 130 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 189

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 190 SVFGGVGERTREGNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTM 249

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 250 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 308 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 367

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 368 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 426

Query: 420 S 420
            
Sbjct: 427 P 427


>gi|157285299|gb|ABV31389.1| ATPase [Vibrio tapetis]
 gi|157285301|gb|ABV31390.1| ATPase [Vibrio tapetis]
          Length = 441

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G N       + +  D V    +G    +  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGGN---YALALNLERDSVGAVVMGPYANLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  I    P  + R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLSSPIEVIAPGVIARKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ L      +  D     I   +G++   +   +  
Sbjct: 116 AVDSMIPIGRGQRELIIGDRQIGKTALAIDSIINQRDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    YP  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAYPGDVFYLHSRLLERAARVSEAYVEAFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIVKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDETTKKQLDHGQKVTELMKQKQ--YAPFSVFDQAL 410


>gi|37721011|gb|AAN32508.1| ATP synthase beta subunit [Aphyllanthes monspeliensis]
          Length = 497

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFSPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|332105885|gb|AEE01405.1| ATP synthase beta chain [Thespesia populnea]
          Length = 493

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|313576709|gb|ADR66862.1| ATP synthase beta subunit [Ternstroemia fragrans]
          Length = 479

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|183206604|gb|ACC54500.1| ATP synthase beta subunit [Roella ciliata]
          Length = 488

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 11  GRIGQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTWPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMKVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|194434949|ref|ZP_03067192.1| flagellar protein export ATPase FliI [Shigella dysenteriae 1012]
 gi|194416784|gb|EDX32910.1| flagellar protein export ATPase FliI [Shigella dysenteriae 1012]
 gi|332095522|gb|EGJ00538.1| flagellar protein export ATPase FliI [Shigella dysenteriae 155-74]
          Length = 457

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 156/441 (35%), Positives = 239/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGRE+++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGRELKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+   PIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQAPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      +      + +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALINEQHYARMRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|42559028|gb|AAS20200.1| ATP synthase beta subunit [Sparganium eurycarpum]
          Length = 480

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDAVFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|150398119|ref|YP_001328586.1| F0F1 ATP synthase subunit beta [Sinorhizobium medicae WSM419]
 gi|190358705|sp|A6UDM1|ATPB_SINMW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150029634|gb|ABR61751.1| ATP synthase F1, beta subunit [Sinorhizobium medicae WSM419]
          Length = 509

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 187/412 (45%), Gaps = 19/412 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G ++ +      V     Q   + + +      +  + +V   +  + V    +   E +
Sbjct: 41  GRVTQVIGAVVDVAFEEGQLPKILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGL 100

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N +G+P+D    L K      I    P  +++  
Sbjct: 101 VRGQKVTDTGAPIAVPVGKETLGRIMNVIGEPVDEAGPL-KTSARRAIHQDAPAYVDQST 159

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 160 EAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 219

Query: 198 RGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +   + +        G    K+ +V    +E P  R    LT +T+AE F  +G
Sbjct: 220 RTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEQFRDEG 279

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +   KG+IT+
Sbjct: 280 QDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITS 337

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      +
Sbjct: 338 VQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEE 397

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 398 HYEVARKVQGTLQRYKALQDIIAILGMDELSEED-KIAVARARKIERFLSQP 448


>gi|24113316|ref|NP_707826.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 301]
 gi|26248210|ref|NP_754250.1| flagellum-specific ATP synthase [Escherichia coli CFT073]
 gi|30063381|ref|NP_837552.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 2457T]
 gi|110642047|ref|YP_669777.1| flagellum-specific ATP synthase [Escherichia coli 536]
 gi|227885630|ref|ZP_04003435.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|300975545|ref|ZP_07173056.1| flagellar protein export ATPase FliI [Escherichia coli MS 45-1]
 gi|301050699|ref|ZP_07197560.1| flagellar protein export ATPase FliI [Escherichia coli MS 185-1]
 gi|306814236|ref|ZP_07448402.1| flagellum-specific ATP synthase [Escherichia coli NC101]
 gi|331657987|ref|ZP_08358949.1| flagellar protein export ATPase FliI [Escherichia coli TA206]
 gi|26108614|gb|AAN80817.1|AE016762_70 Flagellum-specific ATP synthase [Escherichia coli CFT073]
 gi|24052326|gb|AAN43533.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 301]
 gi|30041633|gb|AAP17361.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 2457T]
 gi|110343639|gb|ABG69876.1| flagellum-specific ATP synthase [Escherichia coli 536]
 gi|227837203|gb|EEJ47669.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|281601381|gb|ADA74365.1| Flagellum-specific ATP synthase [Shigella flexneri 2002017]
 gi|300297622|gb|EFJ54007.1| flagellar protein export ATPase FliI [Escherichia coli MS 185-1]
 gi|300410314|gb|EFJ93852.1| flagellar protein export ATPase FliI [Escherichia coli MS 45-1]
 gi|305852395|gb|EFM52846.1| flagellum-specific ATP synthase [Escherichia coli NC101]
 gi|307553954|gb|ADN46729.1| flagellum-specific ATP synthase [Escherichia coli ABU 83972]
 gi|313650163|gb|EFS14576.1| flagellar protein export ATPase FliI [Shigella flexneri 2a str.
           2457T]
 gi|315290258|gb|EFU49636.1| flagellar protein export ATPase FliI [Escherichia coli MS 153-1]
 gi|320194346|gb|EFW68977.1| Flagellum-specific ATP synthase FliI [Escherichia coli WV_060327]
 gi|324005860|gb|EGB75079.1| flagellar protein export ATPase FliI [Escherichia coli MS 57-2]
 gi|331056235|gb|EGI28244.1| flagellar protein export ATPase FliI [Escherichia coli TA206]
 gi|332757288|gb|EGJ87625.1| flagellar protein export ATPase FliI [Shigella flexneri 2747-71]
 gi|332757507|gb|EGJ87842.1| flagellar protein export ATPase FliI [Shigella flexneri K-671]
 gi|332766679|gb|EGJ96883.1| flagellar protein export ATPase FliI [Shigella flexneri 2930-71]
 gi|333003314|gb|EGK22860.1| flagellar protein export ATPase FliI [Shigella flexneri K-218]
 gi|333017583|gb|EGK36895.1| flagellar protein export ATPase FliI [Shigella flexneri K-304]
          Length = 457

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|25808423|gb|AAN74338.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 353

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 4   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 64  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 122

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 123 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 182

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 183 YSGVAMGEYFRDHVRHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 242

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 243 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 302

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 303 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 353


>gi|295697747|ref|YP_003590985.1| ATP synthase F1, beta subunit [Bacillus tusciae DSM 2912]
 gi|295413349|gb|ADG07841.1| ATP synthase F1, beta subunit [Bacillus tusciae DSM 2912]
          Length = 472

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 11/366 (3%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  ++V    +   + +  G  V   GR   +       GR+ N LG+PID    + 
Sbjct: 53  AVHLGDNVVRTVAMSSTDGLVRGMEVVDTGRPIAVPVGEATLGRIFNVLGQPIDEQGPV- 111

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +L+  I    P    +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ L+  
Sbjct: 112 ATELTHPIHRPAPSFEEQSTKVEIFETGIKVVDLLAPYIKGGKVGLFGGAGVGKTVLIQE 171

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +         + + VGER RE  +   +      + K+V+V    +E P  R    L
Sbjct: 172 LIHNIAKQHGGFSVFAGVGERTREGNDLYHEMRESGVIDKTVMVFGQMNEPPGARMRVGL 231

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 232 TGLTFAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 291

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT++ ++ V  D++ DP   +  + LD    L R ++E G YP VDPLA
Sbjct: 292 RI--TSTKKGSITSIQAIYVPADDYTDPAPATTFAHLDATTNLERKISELGIYPAVDPLA 349

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   +   +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 350 STSRALSPDVVGQEHYDVARGVQQVLQRYRELQDIIAILGMDELTDED-KLTVARARKIQ 408

Query: 415 DFLKQS 420
           +FL Q 
Sbjct: 409 NFLSQP 414


>gi|124361814|gb|ABN09349.1| ATP synthase beta subunit [Careya arborea]
          Length = 455

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|315296475|gb|EFU55772.1| flagellar protein export ATPase FliI [Escherichia coli MS 16-3]
          Length = 457

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|311113893|ref|YP_003985114.1| ATP synthase F1 sector subunit alpha [Gardnerella vaginalis ATCC
           14019]
 gi|310945387|gb|ADP38091.1| ATP synthase F1 sector alpha subunit [Gardnerella vaginalis ATCC
           14019]
          Length = 553

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/421 (22%), Positives = 176/421 (41%), Gaps = 22/421 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + GY+ +       V  LS      + +  +    D LG    ++   + +  +G    I
Sbjct: 31  EVGYVVTAGDGIAHVAGLS-GCMANELLTFEN---DTLGLAFNLDAHEIGVVILGDFTGI 86

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V+  G    +     + GR ++ LG PIDG  ++   +  + + ++ P  ++R  
Sbjct: 87  EEGQEVYRTGEVLSVPVGDAYLGRTVDPLGNPIDGLGAIECKERRI-LEAQAPDVIHRHP 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++   TG++ ID  TP+  GQR  +      GK      T+++     +  D     + 
Sbjct: 146 VDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTIINQRTNWESGDPKKQVRC 205

Query: 191 IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +    +        K + +V + + +S   + +AP T   I +++   G
Sbjct: 206 IYVAIGQKGSTIAAVRQSLEEAGAMKYTTIVASPASDSAGFKYIAPYTGSAIGQHWMYNG 265

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G++
Sbjct: 266 KHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDDMGGGSM 325

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +    ++ +  I  +V SI DG I L   L   G+ P VD   SVSR+   A + 
Sbjct: 326 TGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRPAVDVGISVSRVGGAAQAK 385

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             KK+   L   + R++      +   +   +D      + +   + + LKQ      S 
Sbjct: 386 ALKKVSGMLKISLARYKSLESFAM---FASDLDAASKAQLTRGARLTELLKQKQFSPRSM 442

Query: 428 D 428
           +
Sbjct: 443 E 443


>gi|167043567|gb|ABZ08262.1| putative ATP synthase alpha/beta family, nucleotide-binding domain
           protein [uncultured marine microorganism
           HF4000_APKG2K17]
          Length = 462

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 161/433 (37%), Positives = 236/433 (54%), Gaps = 10/433 (2%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQ 61
           NL T     E +    V + G +  +    + V   +    +G           S    +
Sbjct: 15  NLGTYISEIEKFPA--VRKEGRVMQVIG--HMVEATNPGCSVGGMCKIYNPATKSSVTAE 70

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG 120
           V+    D + I P+     I     +    R   +       GRVI+ L +P+DG   L 
Sbjct: 71  VVGFRKDRMLIMPLHNAHGIGPKCRIIPEDRPAMVPVGDGLLGRVIDPLMRPMDGLGELS 130

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                + +  +V   MNRQR++K    G+R I+       GQRIG+ AGSG+GKS LL M
Sbjct: 131 TS-TEVPLYPEVVNPMNRQRIKKPLDVGVRSINACLTCGRGQRIGIMAGSGVGKSVLLGM 189

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR    D  +ISLVGERG+EVREFIED    + +++SVV+VATSD+ P+LR      A 
Sbjct: 190 MARYTDADINVISLVGERGKEVREFIEDNLGEEGMRRSVVIVATSDQPPLLRMRGAYIAT 249

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAE+F ++G +VLL +DS+TRFA + REI   +GE P  +GYP SVF+ LP LLER G 
Sbjct: 250 SIAEHFRNEGQDVLLSMDSLTRFAMAQREIGLAAGEPPTTKGYPPSVFALLPGLLERTGT 309

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
            +   G+IT   +VLV+GD+ NDPIAD++R+I+DGHI L+R +AE+G YP VD L+S SR
Sbjct: 310 HDGP-GSITGFYTVLVEGDDANDPIADAIRAIVDGHIYLSREIAEKGTYPAVDLLSSTSR 368

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +          KL   +   +  + E  D+  IG Y  G +  +D A+ + P+I +F++Q
Sbjct: 369 VMVDVVGEKHLKLNQIMRRTLATYREAEDLINIGAYVQGSNPEIDYAITKKPLIQEFIQQ 428

Query: 420 SPSDLSSEDVFQE 432
             ++ +     +E
Sbjct: 429 GMNEHTDLKECEE 441


>gi|14587183|gb|AAK70492.1| ATP synthase beta subunit [Hanguana malayana]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6687550|emb|CAB65004.1| ATP synthase beta subunit [Eremosyne pectinata]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 79  MSATDGLTRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             A    +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPAIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|212896664|gb|ACJ38535.1| membrane-bound ATP synthase subunit B [Tephrosia rhodesica]
          Length = 470

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIDQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|186886281|gb|ACC93543.1| ATPase F1 alpha subunit [Juncus przewalskii]
          Length = 361

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 91/359 (25%), Positives = 157/359 (43%), Gaps = 18/359 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 7   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 66

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 67  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 125

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   VG++   V + ++     N    SV+V AT
Sbjct: 126 TAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANALDYSVLVAAT 185

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 186 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 245

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L+  
Sbjct: 246 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLDTE 305

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D
Sbjct: 306 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLD 361


>gi|16943674|emb|CAD10772.1| atp synthase, beta subunit [Eustrephus latifolius]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718228|gb|AAK72852.1| ATP synthase beta subunit [Sparganium americanum]
          Length = 483

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDAVFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|14717984|gb|AAK72734.1| ATP synthase beta subunit [Callitriche heterophylla]
          Length = 483

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + V+ +G   D  GQ I +  ++        V    
Sbjct: 6   GRIVQIIGPVLDVAFPPGKMPNIYNAVIVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|6687199|emb|CAB64877.1| ATP synthase beta subunit [Callitriche heterophylla]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + V+ +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNAVIVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708446|emb|CAB89916.1| ATP synthase beta subunit [Impatiens repens]
          Length = 425

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+G + L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGXTVLIMELINNIAKAHGSVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER  E  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGXXERTPEXNDLYMEMKKSGVINEQNFGESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEEX-RLTVARARKIERFLSQP 420


>gi|306485983|gb|ADM92640.1| ATP synthase CF1 beta subunit [Franklinia alatamaha]
          Length = 471

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/433 (26%), Positives = 187/433 (43%), Gaps = 32/433 (7%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434

Query: 421 PS---DLSSEDVF 430
                D   E  F
Sbjct: 435 LFGELDGLPEQAF 447


>gi|260595802|ref|YP_003208373.1| F0F1 ATP synthase subunit beta [Cronobacter turicensis z3032]
 gi|260214979|emb|CBA26614.1| ATP synthase subunit beta [Cronobacter turicensis z3032]
          Length = 460

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +     N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPKVYDALEVTNGNEHLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G +V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLVVTDLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFREEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|170769431|ref|ZP_02903884.1| flagellar protein export ATPase FliI [Escherichia albertii TW07627]
 gi|170121755|gb|EDS90686.1| flagellar protein export ATPase FliI [Escherichia albertii TW07627]
          Length = 456

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/437 (36%), Positives = 239/437 (54%), Gaps = 19/437 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G +   T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLIRATGLVLEATGL--QLPLGATCVIERQNGTETREVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   + +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVDGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTAE-TGALITPPFNPLQRTPIEHVLDTGVRPINTLLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVNVGAYAKGSDPMLDKAIVLWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEI 433
           +Q   + +  ED  Q +
Sbjct: 433 QQGIFERADWEDSLQGL 449


>gi|157689164|gb|ABV65138.1| ATP synthase CF1 beta subunit [Plumbago auriculata]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFTPGKMPYIYNALVVKG--RDTSGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 PFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34539445|gb|AAQ74606.1| F1-ATPase alpha subunit [Stemona javanica]
          Length = 377

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 92/384 (23%), Positives = 161/384 (41%), Gaps = 21/384 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGLNE-IQAGEMVEFA---SGVKGIAMNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVR 203
           D   P+  GQR  +      GK+ +      +               +   +G++   V 
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSETLYCVHVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER      +   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   +
Sbjct: 296 SAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSLKLEL 355

Query: 381 HRFEETRDIRLIGGYRPGVDLILD 404
            ++ E   +     +   +D    
Sbjct: 356 AQYRE---VAAFAQFGSDLDAATQ 376


>gi|6689231|emb|CAB65406.1| ATP synthase beta subunit [Scrophularia californica]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQXLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|256823841|ref|YP_003147804.1| ATP synthase F1 subunit beta [Kangiella koreensis DSM 16069]
 gi|256797380|gb|ACV28036.1| ATP synthase F1, beta subunit [Kangiella koreensis DSM 16069]
          Length = 458

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/404 (27%), Positives = 185/404 (45%), Gaps = 10/404 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G I  I      V      V      +        L    ++   +V    +G  + + 
Sbjct: 3   TGKIVEIIGAVIDVEFPRDSVPKVYDALFVKATELTLEVQQQLGDGVVRCIAMGASDGLR 62

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G    + G   ++       GR+++ LG+PID    +G+ +  M I  K P        
Sbjct: 63  RGLEATNTGAPIQVPVGKETLGRIMDVLGEPIDQKGPIGEKE-RMSIHRKAPKLEELAPA 121

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER
Sbjct: 122 NELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGER 181

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VLL +D
Sbjct: 182 TREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFID 241

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V  
Sbjct: 242 NIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPA 299

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSL 376
           D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D      +   +   +
Sbjct: 300 DDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGSEHYDVARGV 359

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 360 QGVLQRYKELKDIIAILGMDELSEED-KQTVARARKIQRFLSQP 402


>gi|156598493|gb|ABU85505.1| ATP synthase CF1 beta subunit [Passiflora biflora]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+ S+   +V ++  +  +    +   E ++ G  V   G    +       GR+ N LG
Sbjct: 56  GQQSNVTCEVQQLLGNNRIRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLG 115

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 116 EPIDELGPVD-TRTTSPIHRSAPTFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGA 174

Query: 171 GIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +         + + VGER RE  +   +               K  +
Sbjct: 175 GVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYVEMKESGVINEKNITESKVAL 234

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 235 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 294

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++ +IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 295 AVGYQPTLSTEMGSLQERI--TSTKEASITSIQAVYVPADDLTDPAPATTFAHLDATTVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 353 SRRLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDE 412

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 413 LSEED-RLTVARARKIERFLSQP 434


>gi|14717958|gb|AAK72721.1| ATP synthase beta subunit [Bauera rubioides]
          Length = 481

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|4995177|emb|CAB44029.1| H(+)-transporting ATP synthase [Grewia occidentalis]
          Length = 484

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|78102542|ref|YP_358683.1| ATP synthase CF1 beta subunit [Nicotiana sylvestris]
 gi|81238327|ref|NP_054506.2| ATP synthase CF1 beta subunit [Nicotiana tabacum]
 gi|118573704|sp|Q3C1J5|ATPB_NICSY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|254777|gb|AAB23131.1| proton-adenosine triphosphatase beta subunit, proton-ATPase beta
           subunit, coupling factor-1 beta, CF1-beta [Nicotiana
           tabacum, var. Xanthi, tentoxin-resistant, Peptide
           Chloroplast, 498 aa]
 gi|76559641|emb|CAA77360.2| ATPase beta subunit [Nicotiana tabacum]
 gi|77799569|dbj|BAE46658.1| ATPase beta subunit [Nicotiana sylvestris]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATEGLTRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|298293437|ref|YP_003695376.1| ATP synthase F1 subunit beta [Starkeya novella DSM 506]
 gi|296929948|gb|ADH90757.1| ATP synthase F1, beta subunit [Starkeya novella DSM 506]
          Length = 477

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/433 (24%), Positives = 186/433 (42%), Gaps = 26/433 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +      +  + +V   +  + V    +   E + 
Sbjct: 5   GRITQVIGAVVDVQFEDHLPEILNALDTTNNGARLVLEVAQHLGENTVRTIAMDSTEGLV 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    +  G  +  I    P    +   
Sbjct: 65  RGAEVKDTGGPIAVPVGEATLGRIMNVIGEPVDEAGPVV-GTTTRGIHQPAPSYAEQSTE 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 124 AEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 183

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +   +              K  +V    +E P  R    LT +T+AEYF
Sbjct: 184 TREGNDLYHEMIESKVNVDPHENNGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEYF 243

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 244 RDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKG 301

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+     
Sbjct: 302 SITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPMI 361

Query: 366 -SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +   +   +   + R++  +DI  I G     +      V +   I  FL Q     
Sbjct: 362 LGEEHYNVARQVQQTLQRYKSLQDIIAILGMDELSEED-KTTVARARKIERFLSQP---F 417

Query: 425 SSEDVFQEITKKL 437
              +VF     KL
Sbjct: 418 HVAEVFTGSPGKL 430


>gi|289677531|ref|ZP_06498421.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. syringae
           FF5]
 gi|330898624|gb|EGH30043.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330976387|gb|EGH76444.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 514

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/442 (21%), Positives = 183/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLNNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +     +   +G++   +   +     +     ++VV A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIVVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E         +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|61968285|gb|AAX57069.1| ATP synthase beta subunit [Phyllanthus calycinus]
          Length = 479

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTFPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEDNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|257852930|gb|ACV71476.1| ATP synthase beta subunit [Endodesmia calophylloides]
          Length = 490

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|238752371|ref|ZP_04613849.1| secretion system apparatus ATP synthase ssaN [Yersinia rohdei ATCC
           43380]
 gi|238709412|gb|EEQ01652.1| secretion system apparatus ATP synthase ssaN [Yersinia rohdei ATCC
           43380]
          Length = 433

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 154/402 (38%), Positives = 218/402 (54%), Gaps = 10/402 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G I  +     +       V LG+       + D L +V+ I      + P     
Sbjct: 15  IESCGPILDVGPTLISAHL--PGVALGELCHI--GSVDMLAEVVAIEQQTALLSPFASST 70

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+ V   G   RI       GRV++ LG PID   +L       E+ +  P  + R
Sbjct: 71  GLRSGEWVRPLGHAHRIRVGPDLMGRVLDGLGVPIDSGPAL--TGYWRELDNSPPDPLTR 128

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           Q V+    TGIR ID       GQRIG+FA +G+GKS+LL M       D  +++L+GER
Sbjct: 129 QPVQHLLTTGIRAIDGVLSCGEGQRIGIFAAAGVGKSSLLGMLCAGCSADITVLALIGER 188

Query: 199 GREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+E     +   ++V+VVATSD   + R     TA T+AEYF   G  VLL+ D
Sbjct: 189 GREVREFLEQVLTPEARARTVIVVATSDRPALERLKGIYTATTVAEYFRECGLKVLLMAD 248

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REI   +GE+P    +P SVF+ LPRLLER G S   +G+ITA  +VLV+G
Sbjct: 249 SLTRYARAAREIGLAAGEIPAMGSFPASVFAALPRLLERAGNSA--QGSITAFYTVLVEG 306

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ N+P+AD VRS+LDGH+VL+R LA  G YP +D  AS+SR+  +  S     L   L 
Sbjct: 307 DDMNEPVADEVRSLLDGHLVLSRQLAGAGHYPAIDIAASISRIMPQIASVAHLALAQKLR 366

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   ++E   +  +G Y+ G DL  D+A+ + P I  FL+Q
Sbjct: 367 RMQSCYQEIELLVRVGEYQEGQDLQADEALARYPAIRAFLQQ 408


>gi|205354552|ref|YP_002228353.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|226740669|sp|B5RFW3|ATPB_SALG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|205274333|emb|CAR39357.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326629687|gb|EGE36030.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 460

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 187/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLSRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|167768338|ref|ZP_02440391.1| hypothetical protein CLOSS21_02894 [Clostridium sp. SS2/1]
 gi|317497734|ref|ZP_07956048.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709862|gb|EDS20441.1| hypothetical protein CLOSS21_02894 [Clostridium sp. SS2/1]
 gi|291560311|emb|CBL39111.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing
           bacterium SSC/2]
 gi|316894984|gb|EFV17152.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 467

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/411 (27%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 22  QGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           + G I+ +      +         + D +  Q K+   L  V+     +  D V    +G
Sbjct: 5   RTGKITQVIGAVLDIKFGSDNLPEINDAIDIQTKDGGKL--VVEVAQHLGDDTVRCIAMG 62

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG PID   +  +G   + I  K P  
Sbjct: 63  PTDGLVRGMEAQATGGPISVPVGEATLGRIFNVLGDPIDNKPA-PEGANRLPIHRKAPEF 121

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+ 
Sbjct: 122 SEQSTETEVLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVF 181

Query: 195 --VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +      + K+ +V    +E P  R    LT +TIAE F  +G  
Sbjct: 182 TGVGERTREGNDLYTEMSESGVIDKTAMVFGQMNEPPGARMRVGLTGLTIAEDFRDRGGK 241

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V
Sbjct: 242 DVLLFIDNIFRFTQAGSEVSALLGRVPSAVGYQPTLQTEMGALQERI--TSTKNGSITSV 299

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D      + 
Sbjct: 300 QAVYVPADDLTDPAPATTFAHLDATTVLSRAISEMGIYPAVDPLESTSRILDPKVVGEEH 359

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            K+   +  ++ +++E +DI  I G     +      V +   +  FL Q 
Sbjct: 360 YKVARGVQEILQKYKELQDIIAILGMDELSEDE-KLVVDRARKVQRFLSQP 409


>gi|119368192|dbj|BAF40439.1| ATP synthase beta subunit [Clusia rosea]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GRIAQIIGPVLDVAFRPGKMPNIYNSLVV---KGRDTVGQEINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|7708256|emb|CAB90052.1| ATP synthase beta subunit [Cinchona pubescens]
          Length = 490

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 12  SGRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|325576871|ref|ZP_08147486.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325161077|gb|EGC73195.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 457

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR++N LG+PID    +G  + +  I    P    +
Sbjct: 59  GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEQGEIGAEE-NWSIHRPAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|323148837|ref|YP_004221930.1| ATP synthase CF1 beta subunit [Erodium carvifolium]
 gi|316926301|gb|ADU58154.1| ATP synthase CF1 beta subunit [Erodium carvifolium]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V QG   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPKGKMPYIYNALVVQG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 DFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257095341|ref|YP_003168982.1| flagellar protein export ATPase FliI [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047865|gb|ACV37053.1| flagellar protein export ATPase FliI [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 472

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 155/444 (34%), Positives = 236/444 (53%), Gaps = 29/444 (6%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           N ++  G+++ I  +    + L   + LG    +     S    +V+  N + +++ P  
Sbjct: 28  NSLLPSGHLTRINGLVMEASGL--KLPLGSSCRITPLGGSPIEAEVVGFNGERLFLMPSE 85

Query: 77  IGEEISLGDLVFHW---------GRF------------RISPSACWCGRVINALGKPIDG 115
               +S G  V            GR              +       GRV++  G+P+D 
Sbjct: 86  DVYGLSPGARVVALETRHPPPQIGRLPPARRRSIDRAKLVPVGESLLGRVLDGAGRPLDK 145

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L    L   + S+    M+R  ++K    G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 146 LGPLHARSLR-PLQSRPVNPMSRAPIDKALDVGVRAINGLLCVGQGQRMGLFAGSGVGKS 204

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M AR    + +++ L+GERGREV+EFI +    + L++SVV+ A +D SP++R   
Sbjct: 205 VLLGMMARYTEAEIIVVGLIGERGREVKEFIEQILGEEGLRRSVVIAAPADVSPLMRLQG 264

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
              A  IAEYF  +G +VLLI+DS+TR+A + REIA   GE PV RGYP SVF+ LP+L+
Sbjct: 265 AAYATCIAEYFRDRGRHVLLIMDSLTRYAMAQREIALAIGEPPVTRGYPPSVFARLPQLV 324

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G      G+IT   +VL +GD+  DPIAD+ R+ILDGHIVL+R+LA+ G YP +D  
Sbjct: 325 ERAGNGADGGGSITGFYTVLAEGDDQQDPIADAARAILDGHIVLSRTLADAGHYPAIDIE 384

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            S+SR      S    + + +   L  R++ +RD+  +G Y  G D  LD+A+   P   
Sbjct: 385 QSISRAMVNLVSPGHLEQIRNFKRLFSRYQRSRDLISVGAYAAGSDPQLDQAIAIYPRFE 444

Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438
            FL+QS +  +    F    ++LQ
Sbjct: 445 SFLQQSLAQPAD---FASSLRELQ 465


>gi|224510811|pdb|3FKS|D Chain D, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510812|pdb|3FKS|E Chain E, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510813|pdb|3FKS|F Chain F, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510820|pdb|3FKS|M Chain M, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510821|pdb|3FKS|N Chain N, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510822|pdb|3FKS|O Chain O, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510829|pdb|3FKS|V Chain V, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510830|pdb|3FKS|W Chain W, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|224510831|pdb|3FKS|X Chain X, Yeast F1 Atpase In The Absence Of Bound Nucleotides
 gi|306991952|pdb|3OE7|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991953|pdb|3OE7|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991954|pdb|3OE7|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991961|pdb|3OE7|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991962|pdb|3OE7|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991963|pdb|3OE7|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991970|pdb|3OE7|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991971|pdb|3OE7|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991972|pdb|3OE7|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Gamma-I270t
 gi|306991979|pdb|3OEE|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991980|pdb|3OEE|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991981|pdb|3OEE|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991988|pdb|3OEE|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991989|pdb|3OEE|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991990|pdb|3OEE|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991997|pdb|3OEE|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991998|pdb|3OEE|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306991999|pdb|3OEE|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-F405s
 gi|306992033|pdb|3OFN|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992034|pdb|3OFN|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992035|pdb|3OFN|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992042|pdb|3OFN|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992043|pdb|3OFN|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992044|pdb|3OFN|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992051|pdb|3OFN|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992052|pdb|3OFN|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
 gi|306992053|pdb|3OFN|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase:
           Alpha-N67i
          Length = 484

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 16  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 75

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 76  LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 134

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 135 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 194

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 195 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 254

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 255 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 312

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 313 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 372

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 373 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 428

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 429 VFTGIPGKL 437


>gi|195183479|dbj|BAG66955.1| ATP synthase beta subunit [Anchietea selloviana]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTLGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDELGPVDTCTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEANFA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEEHYETAQKVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119389907|pdb|2HLD|D Chain D, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389908|pdb|2HLD|E Chain E, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389909|pdb|2HLD|F Chain F, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389916|pdb|2HLD|M Chain M, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389917|pdb|2HLD|N Chain N, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389918|pdb|2HLD|O Chain O, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389925|pdb|2HLD|V Chain V, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389926|pdb|2HLD|W Chain W, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|119389927|pdb|2HLD|X Chain X, Crystal Structure Of Yeast Mitochondrial F1-Atpase
 gi|300193118|pdb|2WPD|D Chain D, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193119|pdb|2WPD|E Chain E, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
 gi|300193120|pdb|2WPD|F Chain F, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase
          Length = 478

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 10  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 69

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 70  LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 128

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VG
Sbjct: 129 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVG 188

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 189 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 248

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 249 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 306

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 307 VQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 366

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 367 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 422

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 423 VFTGIPGKL 431


>gi|114216036|gb|ABI54629.1| ATPase alpha subunit [Coleochaete scutata]
          Length = 373

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/374 (23%), Positives = 157/374 (41%), Gaps = 19/374 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V          G  + +  + V I   G    I  GD+V
Sbjct: 1   SVGDGIARVYGLNK-IQAGEMVEFANG---VKGMALNLENENVGIVVFGSDTAIKEGDIV 56

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ALG PIDG D L  G +   +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPVGKSMLGRVVDALGVPIDGKDRLAXGIVRKRVEVKAPGIIARKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINASSRSDSEKLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++        + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVKILSEAGALEYSIIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ + + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDDTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR    A     K++
Sbjct: 297 IEPQAGDVSAYILTNVISITDGQIFLETELFYRGIRPAINVGLSVSRAGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEET 386
             SL   + ++ E 
Sbjct: 357 CGSLKLELAQYREV 370


>gi|4995059|emb|CAB43991.1| H(+)-transporting ATP synthase [Byttneria filipes]
          Length = 478

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 5   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 63  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHKPAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKXGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARAXKIERFLSQP 418


>gi|24940262|emb|CAD43389.1| ATP synthase beta subunit [Saccellium lanceolatum]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|66048347|ref|YP_238188.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. syringae
           B728a]
 gi|71737055|ref|YP_277282.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257485614|ref|ZP_05639655.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289628229|ref|ZP_06461183.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289649119|ref|ZP_06480462.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298489523|ref|ZP_07007532.1| ATP synthase alpha chain [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|302185825|ref|ZP_07262498.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. syringae
           642]
 gi|75499955|sp|Q4ZL22|ATPA_PSEU2 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|115312263|sp|Q48BG3|ATPA_PSE14 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|63259054|gb|AAY40150.1| ATP synthase F1, alpha subunit [Pseudomonas syringae pv. syringae
           B728a]
 gi|71557608|gb|AAZ36819.1| ATP synthase F1, alpha subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298155950|gb|EFH97061.1| ATP synthase alpha chain [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330870060|gb|EGH04769.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330890266|gb|EGH22927.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. mori str.
           301020]
 gi|330952350|gb|EGH52610.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae Cit 7]
 gi|330961488|gb|EGH61748.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330970310|gb|EGH70376.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330987004|gb|EGH85107.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011903|gb|EGH91959.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 514

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/442 (21%), Positives = 183/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLNNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +     +   +G++   +   +     +     ++VV A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIVVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E         +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYREL---AAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|304373019|ref|YP_003856228.1| ATP synthase subunit alpha [Mycoplasma hyorhinis HUB-1]
 gi|304309210|gb|ADM21690.1| ATP synthase subunit alpha [Mycoplasma hyorhinis HUB-1]
 gi|330723369|gb|AEC45739.1| F0F1 ATP synthase subunit alpha [Mycoplasma hyorhinis MCLD]
          Length = 508

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 107/439 (24%), Positives = 196/439 (44%), Gaps = 17/439 (3%)

Query: 6   ETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    E Y+K N++ + G + ++      V  + + V LG+ V  +    +  G  + 
Sbjct: 10  AIIKHQIETYNKKNVIAETGKVITVGDGVAIVYGIDK-VKLGELVAFKN---NTYGIALN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G    +  GD V                 RV+NALG+PIDG+  +    
Sbjct: 66  LEKDYVGVVIMGNENAVVEGDEVRRTNLTISTPVGDGMLSRVVNALGEPIDGNGDISFTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              E+ S+ P  M+R+ +++   TGI  ID   P+  GQR  +      GK+ +      
Sbjct: 126 -RREVFSEAPSIMSRKAIDRPLNTGILAIDSLVPIGLGQRELIIGDRQTGKTAIAIDTIL 184

Query: 184 SDCFDK--VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +  +     +   +G++   + + +     +     + VVVA++ E   L+ +AP   V+
Sbjct: 185 NQKYKNIRCVYVAIGQKNSTIAQIVSKLKKEGAMEYTTVVVASASELAPLQYIAPYVGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE +   G++VL+I D +T+ A + R ++      P    +P  +F +   LLER    
Sbjct: 245 IAEEWMYNGNDVLIIYDDLTKHAIAYRTLSLLLRRPPGREAFPGDIFYQHSYLLERASQL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +E   G+ITA+  V     + +  I  +V SI DG I +  SL   G+ P +D   SVS
Sbjct: 305 SEERGGGSITALPIVETQAGDISAYIPTNVISITDGQIFMRDSLFNSGQKPAIDVGFSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K+  SSL   + ++ E   I+    +   +     + + +   IY+ LK
Sbjct: 365 RVGSSAQTKAMKQASSSLKLQLAQYNE---IKAFAQFGSDLGESSQRLLDRGTKIYELLK 421

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q+  +  ++  F ++   L
Sbjct: 422 QNQYEHLTQ--FNQVMILL 438


>gi|155029317|dbj|BAF75542.1| ATP synthase beta subunit [Seidelia triandra]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   DN+GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDNVGQEINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 71  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRARSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21633393|gb|AAM52171.1| ATP synthase beta subunit [Porana volubilis]
          Length = 471

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 180/413 (43%), Gaps = 19/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V QG+ ++   +V ++  +  V    +   + +
Sbjct: 4   GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRETNVTCEVQQLLGNNRVRAVAMSDTDGL 63

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V        +       GR+ N LG P+D    +     S  I    P  +    
Sbjct: 64  TRGMEVIDTRAPISVPLGGSTLGRIFNVLGAPVDNLGPVDTNTTSSPIHRSAPAFIQLDT 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGE 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +   VGE
Sbjct: 124 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGE 183

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 184 RTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 243

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 244 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 301

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 302 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 361

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|62085215|gb|AAX63010.1| ATP synthase beta subunit [Dapania racemosa]
          Length = 486

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGDEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|24940162|emb|CAD43366.1| ATP synthase beta subunit [Borago officinalis]
          Length = 483

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   L +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFRLGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|94312425|ref|YP_585635.1| F0F1 ATP synthase subunit beta [Cupriavidus metallidurans CH34]
 gi|118573729|sp|Q1LHL0|ATPB_RALME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|93356277|gb|ABF10366.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 467

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    + + D
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMSVMSTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-EAD 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 EKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 350 QLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILGMDELS-PEDKLAVSRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|167838424|ref|ZP_02465283.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43]
          Length = 459

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 187/406 (46%), Gaps = 11/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V+G  +  I +V            + D ++ +G       Q  ++   +V    +G  + 
Sbjct: 2   VEGKIVQCIGAVIDVEFPRESMPKIYDALILEGSELTLEVQ-QQLGDGVVRTICLGASDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG+PID    +   +    I  K P      
Sbjct: 61  LRRGVVVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPIV-SEHKRSIHQKAPAFDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL  
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V V
Sbjct: 240 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      +   +  
Sbjct: 298 PADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 RVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 402


>gi|1073879|pir||D64071 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           Haemophilus influenzae (strain Rd KW20)
          Length = 468

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 13/411 (3%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +  V+  G I  I      V      V  + D +  +   +  + Q +     +V    +
Sbjct: 8   RGTVMSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIAL 65

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +     ++       GR++N LG+PID   ++G+ +    I    P 
Sbjct: 66  GTSDGLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPS 124

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     +
Sbjct: 125 YEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSV 184

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 185 FAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGR 244

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 245 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSV 302

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 303 QAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEH 362

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 YDVARGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 412


>gi|315650482|ref|ZP_07903552.1| ATP synthase F1 sector beta subunit [Eubacterium saburreum DSM
           3986]
 gi|315487278|gb|EFU77590.1| ATP synthase F1 sector beta subunit [Eubacterium saburreum DSM
           3986]
          Length = 463

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I+ I      +         + + +     +     +V   +  DIV    +G  + +
Sbjct: 7   GKITQIIGAVLDIQFSRGHLPQINEAIQIDTADGVLTVEVAQHLGDDIVRTIAMGSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+ ID  +   K +  + I  K P    +  
Sbjct: 67  VRGMEAKATGAPISVPVGENTLGRIFNVLGEVIDKKEP-PKVEEYLPIHRKAPSFEEQST 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 126 QTEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG  +VLL 
Sbjct: 186 RTREGNDLYHEMTESGVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPANTFAHLDATTVLDRSIVEMGIYPAVDPLGSTSRILSPHVVGEEHYEVAQ 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  + G     +      V +   I  FL Q 
Sbjct: 364 RVQEVLQKYKELQDIIAMLGMDELSEDD-KLTVARARKIQRFLSQP 408


>gi|166895602|ref|YP_001661396.1| ATPase subunit 1 [Cycas taitungensis]
 gi|166706934|dbj|BAF98398.1| ATPase subunit 1 [Cycas taitungensis]
          Length = 508

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/431 (20%), Positives = 162/431 (37%), Gaps = 24/431 (5%)

Query: 10  QLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           +   +Y  NL V G G +  +      V   S  +  G+ V      S   G  +    +
Sbjct: 16  RRITNYCTNLQVDGIGRVVPVGDGIARVYG-SNEIQAGEMVEFA---SGVKGIALNPENE 71

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GDLV   G    +       GRV++ALG PIDG  +L   +    
Sbjct: 72  NVGIVVSGSDTAIKEGDLVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDHE-RRR 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC- 186
           +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 131 VEVKAPGIIERKSVHEPMQTGLKAVDSPVPIGRGQREPIIGDRQTGKTAIAIDTISNQKR 190

Query: 187 ----------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
                         +   +G++     + ++   G D  +  ++V AT+ +   L+ +AP
Sbjct: 191 MNSKGTSDSEKLYRVYVAIGQKRSTAAQLVQILSGADASEYPIIVAATASDPAPLQFLAP 250

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                  EYF   G +  +I D  ++ A + R+++      P    +P  V     R  E
Sbjct: 251 YPGCAAGEYFRDNGMHASIIYDDPSKQAVAYRQMSLLLRRPPGREAFPGDVLYLHSRPSE 310

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V  I DG I     L   G  P ++ 
Sbjct: 311 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINV 370

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     +++  S    + ++ E   +         +D       ++   +
Sbjct: 371 GLSVSRVGSAAQLKAMRQVRGSSKPELAQYRE---VAASAQSGSDLDAATQAPSNRGARL 427

Query: 414 YDFLKQSPSDL 424
            +  KQ     
Sbjct: 428 TEVPKQPQYPP 438


>gi|90415394|ref|ZP_01223328.1| ATP synthase subunit B [marine gamma proteobacterium HTCC2207]
 gi|90332717|gb|EAS47887.1| ATP synthase subunit B [marine gamma proteobacterium HTCC2207]
          Length = 465

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 116/414 (28%), Positives = 187/414 (45%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +V  GK      Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFARDQVPSVYDALVVDGKGLTLEVQ-QQLGDGVVRTIAMGASE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S G  V +      +       GR+++ LG PID    +G+ +  M I  K P     
Sbjct: 60  GVSRGLGVVNTKAPISVPVGVETLGRIMDVLGNPIDEKGPIGEKE-RMAIHRKPPAYDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              +   +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 AASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYYEMQESGVVNIETPSESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 239 EGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     
Sbjct: 297 TSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASKGIYPAVDPLDSTSRQLDPLIIG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++ R++E +DI  I G     +     AV +   I  FL Q 
Sbjct: 357 TEHYAVARGVQSVLQRYKELKDIIAILGMDELSEED-KMAVARARKIERFLSQP 409


>gi|25808419|gb|AAN74336.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
              V + EYF     + L++ D +++ A + REI+      P    +P  VF  L RLLE
Sbjct: 186 YAGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYILSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|32477553|ref|NP_870547.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1]
 gi|32448107|emb|CAD77624.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1]
          Length = 467

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 168/439 (38%), Positives = 249/439 (56%), Gaps = 10/439 (2%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQ 61
            N ET+ Q     S  L    G ++S+T    TV  ++    LG    +        L +
Sbjct: 15  PNPETIRQSLG--SLVLSQIRGRVASVTGDAVTVQGMT--APLGAICELMPPDAKPTLAR 70

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI  +     + P+     ++ GD V    R   +      CGRVI+A G+PIDG   L 
Sbjct: 71  VIGFDDTRPILAPMEAISALAAGDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGK-PLS 129

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
              + +      P +++R  +++  +TG+R ID       GQR+G+FAGSG+GKSTLL M
Sbjct: 130 DDLVRVSASRAAPDSLDRPPIDEPLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLLGM 189

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R    D+++I++VGERGREV+EF++       LK+SVVVVATSD+    R  A  TA 
Sbjct: 190 LTRGTTADRIVIAMVGERGREVQEFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTAT 249

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE F  +G  VLL++DS+TRFA + RE+   +GE P  RGYP SVF+ LP+L+ER G 
Sbjct: 250 AIAEKFRDEGHRVLLLVDSVTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAGR 309

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           + K  G+ITA  +VLV+GD++N+PI+D+VR +LDGHIVLNR LA  G YPP+D   S+SR
Sbjct: 310 TTK--GSITAFYTVLVEGDDNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISR 367

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +A+   + +  +    +   + +++ + D+  IG YR G D  +D A+     I D L+Q
Sbjct: 368 VANHLVTPETYQATLGIREHMVQYQTSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQ 427

Query: 420 SPSDLSSEDVFQEITKKLQ 438
             ++++     Q   +KL 
Sbjct: 428 DANEITPIADSQARVQKLH 446


>gi|307823035|ref|ZP_07653265.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96]
 gi|307735810|gb|EFO06657.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96]
          Length = 459

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 20/411 (4%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G I  I      V    S    + D +  QGK     G V+     +   +V    +
Sbjct: 1   MSSGKIVQIIGAVVDVEFSRSDLPKVYDALNVQGK-----GLVLEVQQQLGDGVVRTIAM 55

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +S G  V +      +       GR++N LG+PID    +G+  +   I  + P 
Sbjct: 56  GTTDGLSRGLEVSNTNAPIAVPVGQETLGRIMNVLGEPIDEKGPIGE-KVKWGIHREAPS 114

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     +
Sbjct: 115 YAEQAAATELLETGIKVIDLVCPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSV 174

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AEYF  +G 
Sbjct: 175 FAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGR 234

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++
Sbjct: 235 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSI 292

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +AE G YP +DPL S SR  D      + 
Sbjct: 293 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEH 352

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++E RDI  I G     +      V +   +  FL Q 
Sbjct: 353 YDVARKVQGILQRYKELRDIIAILGMDELSEED-KLTVSRARKMQRFLSQP 402


>gi|297243085|ref|ZP_06927023.1| F0F1-type ATP synthase, alpha subunit [Gardnerella vaginalis AMD]
 gi|296889296|gb|EFH28030.1| F0F1-type ATP synthase, alpha subunit [Gardnerella vaginalis AMD]
          Length = 527

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/415 (22%), Positives = 175/415 (42%), Gaps = 22/415 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + GY+ +       V  LS      + +  +    D LG    ++   + +  +G    I
Sbjct: 5   EVGYVVTAGDGIAHVAGLS-GCMANELLTFEN---DTLGLAFNLDAHEIGVVILGDFTGI 60

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V+  G    +     + GR ++ LG PIDG  ++   +  + + ++ P  ++R  
Sbjct: 61  EEGQEVYRTGEVLSVPVGDAYLGRTVDPLGNPIDGLGAIECNERRI-LEAQAPDVIHRHP 119

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++   TG++ ID  TP+  GQR  +      GK      T+++  A  +  D     + 
Sbjct: 120 VDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTIINQRANWETGDPKKQVRC 179

Query: 191 IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +    +        K + +V + + +S   + +AP T   I +++   G
Sbjct: 180 IYVAIGQKGSTIASVRQSLEEAGAMKYTTIVASPASDSAGFKYIAPYTGSAIGQHWMYNG 239

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G++
Sbjct: 240 KHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDDLGGGSM 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +    ++ +  I  +V SI DG I L   L   G+ P VD   SVSR+   A + 
Sbjct: 300 TGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRPAVDVGISVSRVGGAAQAK 359

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             KK+   L   + R++      +   +   +D      + +   + + LKQ   
Sbjct: 360 ALKKVSGMLKISLARYKSLESFAM---FASDLDAASKAQLTRGARLTELLKQKQF 411


>gi|283782656|ref|YP_003373410.1| ATP synthase F1, alpha subunit [Gardnerella vaginalis 409-05]
 gi|283442053|gb|ADB14519.1| ATP synthase F1, alpha subunit [Gardnerella vaginalis 409-05]
          Length = 553

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/415 (22%), Positives = 175/415 (42%), Gaps = 22/415 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + GY+ +       V  LS      + +  +    D LG    ++   + +  +G    I
Sbjct: 31  EVGYVVTAGDGIAHVAGLS-GCMANELLTFEN---DTLGLAFNLDAHEIGVVILGDFTGI 86

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V+  G    +     + GR ++ LG PIDG  ++   +  + + ++ P  ++R  
Sbjct: 87  EEGQEVYRTGEVLSVPVGDAYLGRTVDPLGNPIDGLGAIECSERRI-LEAQAPDVIHRHP 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++   TG++ ID  TP+  GQR  +      GK      T+++  A  +  D     + 
Sbjct: 146 VDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTIINQRANWETGDPKKQVRC 205

Query: 191 IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +    +        K + +V + + +S   + +AP T   I +++   G
Sbjct: 206 IYVAIGQKGSTIASVRQSLEEAGAMKYTTIVASPASDSAGFKYIAPYTGSAIGQHWMYNG 265

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G++
Sbjct: 266 KHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDDLGGGSM 325

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +    ++ +  I  +V SI DG I L   L   G+ P VD   SVSR+   A + 
Sbjct: 326 TGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRPAVDVGISVSRVGGAAQAK 385

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             KK+   L   + R++      +   +   +D      + +   + + LKQ   
Sbjct: 386 ALKKVSGMLKISLARYKSLESFAM---FASDLDAASKAQLTRGARLTELLKQKQF 437


>gi|159155102|gb|AAI54660.1| Zgc:111961 [Danio rerio]
          Length = 517

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +   G++S  + +V   +  + V    +   E +
Sbjct: 49  SGRIVAVIGAVVDVQFDEGLPPILNALEVAGRDSRLVLEVAQHLGENTVRTIAMDGTEGL 108

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +     +  I ++ P   +   
Sbjct: 109 VRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPIS-TKQTAPIHAEAPEFTDMSV 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 168 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 227

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 228 RTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 287

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 288 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 345

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 346 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTE 405

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 406 HYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 461

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 462 VFTGHLGKL 470


>gi|7708215|emb|CAB90045.1| ATP synthase beta subunit [Corynocarpus laevigata]
          Length = 487

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|307942824|ref|ZP_07658169.1| ATP synthase F1, beta subunit [Roseibium sp. TrichSKD4]
 gi|307773620|gb|EFO32836.1| ATP synthase F1, beta subunit [Roseibium sp. TrichSKD4]
          Length = 474

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/411 (26%), Positives = 184/411 (44%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +    + +  + +V   +  + V    +   E + 
Sbjct: 7   GRVTQVIGAVVDVKFDDHLPLILNALEVDNQGTRLVLEVAQHLGENTVRTIAMDATEGLV 66

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    + K D    I    P  + +   
Sbjct: 67  RGQEVVDTGAPISVPVGVGTLGRIMNVIGEPVDEAGEI-KHDDKRGIHQDAPEFIEQSTE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 185

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    LT +TIAE F  +G 
Sbjct: 186 TREGNDLYWEMIESGVNKEGGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDQGQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTHKGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   S  + LD   VLNRS+AE+G YP VDPL S SR+        + 
Sbjct: 304 QAVYVPADDLTDPAPASTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLSANIIGEEH 363

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   ++   + R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 YETARAVQVTLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 413


>gi|290490142|gb|ADD31478.1| ATP synthase CF1 beta subunit protein [Antirrhinum majus]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTG-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257042663|gb|ACV32932.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/424 (22%), Positives = 171/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +   S  + GRV+NA              +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQXPVSDAYLGRVVNAXXXXXXXXXXXXXSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  G    +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGXXXXIIXDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|28872700|ref|NP_795319.1| ATP synthase F1 subunit alpha [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213968457|ref|ZP_03396600.1| ATP synthase F1, alpha subunit [Pseudomonas syringae pv. tomato T1]
 gi|237801679|ref|ZP_04590140.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|301384256|ref|ZP_07232674.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063893|ref|ZP_07255434.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. tomato
           K40]
 gi|302131977|ref|ZP_07257967.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|81728857|sp|Q87TT2|ATPA_PSESM RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|28855956|gb|AAO59014.1| ATP synthase F1, alpha subunit [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213926745|gb|EEB60297.1| ATP synthase F1, alpha subunit [Pseudomonas syringae pv. tomato T1]
 gi|330876338|gb|EGH10487.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964196|gb|EGH64456.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331017742|gb|EGH97798.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
 gi|331024538|gb|EGI04594.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 514

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/442 (21%), Positives = 184/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLNNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +     +   +G++   +   +     +     ++VV A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIVVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|332161339|ref|YP_004297916.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665569|gb|ADZ42213.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 454

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/446 (35%), Positives = 243/446 (54%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L ++ +  E  S++  + + G ++  T +    T L   + LG   + +    G+  +  
Sbjct: 9   LASMDKFEERISQSTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDNGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+     G      ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARITTGGASASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + SS +   +  K L
Sbjct: 426 QMEIFLQQGMFERSSYEDACQHLKSL 451


>gi|323715458|gb|ADY04797.1| ATP synthase beta subunit [Broussaisia arguta]
          Length = 481

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 10  GRIVQIIGPVLNVAFPPGKMPNIYNALVVKGQ--DTAGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|183217748|ref|YP_001837367.1| ATP synthase CF1 beta subunit [Guizotia abyssinica]
 gi|179366263|gb|ACB86534.1| ATP synthase CF1 beta subunit [Guizotia abyssinica]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMDVVDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDNS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|57868944|gb|AAW57468.1| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 493

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|191173266|ref|ZP_03034796.1| flagellar protein export ATPase FliI [Escherichia coli F11]
 gi|190906383|gb|EDV65992.1| flagellar protein export ATPase FliI [Escherichia coli F11]
 gi|324013496|gb|EGB82715.1| flagellar protein export ATPase FliI [Escherichia coli MS 60-1]
          Length = 457

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 158/441 (35%), Positives = 237/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE    +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPSATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|134294238|ref|YP_001117973.1| F0F1 ATP synthase subunit beta [Burkholderia vietnamiensis G4]
 gi|166201695|sp|A4JA35|ATPB_BURVG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134137395|gb|ABO53138.1| ATP synthase F1 subcomplex beta subunit [Burkholderia vietnamiensis
           G4]
          Length = 464

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 189/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    + + + +  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     +E 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 371 KLV-SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YTITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|225678914|gb|EEH17198.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb03]
          Length = 607

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 117/444 (26%), Positives = 188/444 (42%), Gaps = 33/444 (7%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI- 65
            L  LA  Y+     Q G I  +      V                G+   ++   +   
Sbjct: 135 ALRSLASRYASTSSGQVGKIHQVIGAVVDVK-------------FDGEQLPSILNALETT 181

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           N +   +  V   E +  G  V   G    I       GR++N  G PID    + K   
Sbjct: 182 NGNQKLVLEVAGTEGLVRGATVTDTGAPIMIPVGPGTLGRIMNVTGDPIDERGPI-KHSK 240

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +
Sbjct: 241 KAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINN 300

Query: 185 DCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAP 235
                   S+   VGER RE  +   +         D   K  +V    +E P  R    
Sbjct: 301 IAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARVA 360

Query: 236 LTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + 
Sbjct: 361 LTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQ 420

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL
Sbjct: 421 ERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPL 478

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D      +  ++ + +  ++  ++  +DI  I G     +      V +   +
Sbjct: 479 DSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKL 537

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q     +   VF  I  KL
Sbjct: 538 QRFLSQP---FTVAQVFTGIEGKL 558


>gi|4995191|emb|CAB44036.1| H(+)-transporting ATP synthase [Heliocarpus americanus]
          Length = 482

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHKSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|6689410|emb|CAB65478.1| ATP synthase beta subunit [Tagetes sp. Nickrent 3061]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D +GQ I +  ++        +    
Sbjct: 21  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRIRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDNS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758881|gb|AAD50855.1| ATP synthase beta subunit [Globba curtisii]
          Length = 496

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    I       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSIPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 PFIELDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|290490162|gb|ADD31488.1| ATP synthase CF1 beta subunit protein [Rhododendron simsii]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   S  +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPSGKMPNIYNALVVQG--RDTVGQPINVTCEVQQLVGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    L     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPLD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKETGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDKHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 434


>gi|290490148|gb|ADD31481.1| ATP synthase CF1 beta subunit protein [Ehretia acuminata]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|222356614|gb|ACM48837.1| ATPase alpha subunit [Tacca palmatifida]
          Length = 369

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 84/371 (22%), Positives = 153/371 (41%), Gaps = 19/371 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQIHSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 240 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQ 356

Query: 405 KAVHQVPIIYD 415
             +++   + +
Sbjct: 357 ALLNRGARLTE 367


>gi|139387437|ref|YP_001122791.1| ATP synthase CF1 beta subunit [Phaseolus vulgaris]
 gi|190358700|sp|A4GG90|ATPB_PHAVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112030959|gb|ABH88071.1| ATP synthase CF1 beta subunit [Phaseolus vulgaris]
 gi|158187164|gb|ABW22797.1| ATP synthase CF1 beta subunit [Phaseolus vulgaris]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 TFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34539183|gb|AAQ74475.1| F1-ATPase alpha subunit [Anemarrhena asphodeloides]
          Length = 390

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 88/397 (22%), Positives = 158/397 (39%), Gaps = 23/397 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLKNENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L      P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQICSETELFYRRIRPAINVGLSVSRVGSAAQLKAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           S    + ++ E   +     +   +D       ++  
Sbjct: 356 SSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGA 389


>gi|49147212|ref|YP_025805.1| ATP synthase F1 subunit alpha [Pseudendoclonium akinetum]
 gi|33439227|gb|AAQ18764.1| ATP synthase F1 subunit alpha [Pseudendoclonium akinetum]
          Length = 567

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 98/430 (22%), Positives = 168/430 (39%), Gaps = 34/430 (7%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIG 78
            +Q G I SI      V  L   V  G+ +   GK+   + G  + +  D V     G  
Sbjct: 63  YLQVGRIDSIGDGIARVYGL-DGVKAGELIEFVGKSGVVVKGMALNLEKDYVGSVLFGSD 121

Query: 79  EEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
            E+  GDL          P   +  GRV++ LG+P+D   +L      + +  K P   +
Sbjct: 122 SELVEGDLARRTKSIISVPVGLFLRGRVVDPLGQPLDDKGALVATKPEL-VERKAPGIKS 180

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC----------- 186
           R R+     TGIR +D   P+ +GQR  +      GK+ +                    
Sbjct: 181 RARINSPMATGIRAVDSLVPIGNGQRELIIGDRQTGKTAIAIDTILHQTRLRQLEANYIN 240

Query: 187 --------------FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
                             +   +G++   V +  +     N    + +V AT+ +   L+
Sbjct: 241 DSAAAKSSIGAQKEGATCVYVAIGQKRSSVAQLAKKLNEANAMAWTTIVAATASDPAPLQ 300

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP  A TIAEYF   G+  +++ D +++ A + R+++      P    +P  VF    
Sbjct: 301 FLAPYAACTIAEYFRDLGEPTVIVYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYCHS 360

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RLLER      +  ++TA+  +     + +  I  +V SI DG   L   L  +G  P +
Sbjct: 361 RLLERSANM-GKGYSLTALPIIETLAGDLSAYIPTNVISITDGQCALEAELFFKGIRPAI 419

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+   L  L+ ++ E         +   +D    + + +  
Sbjct: 420 NVGLSVSRVGSAAQIKAMKKVAGQLKLLLAQYREN---AAFAQFASDLDASTKQVLERGV 476

Query: 412 IIYDFLKQSP 421
            +   LKQ  
Sbjct: 477 RLTQILKQDQ 486


>gi|6689056|emb|CAB65372.1| ATP synthase beta subunit [Paulownia tomentosa]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|24940256|emb|CAD43386.1| ATP synthase beta subunit [Patagonula americana]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|332756097|gb|EGJ86450.1| flagellar protein export ATPase FliI [Shigella flexneri 4343-70]
          Length = 457

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 238/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QQLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|320321672|gb|EFW77771.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331125|gb|EFW87096.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330881923|gb|EGH16072.1| F0F1 ATP synthase subunit alpha [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 514

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/442 (21%), Positives = 184/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKGRIDKLDVTPQARNEGTVVSVSDGIVRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG P+DG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L   +    +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPLNNTETDA-VEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +     +   +G++   +   +     +     ++VV A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIVVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|7708550|emb|CAB89972.1| ATP synthase beta subunit [Plumbago zeylanica]
          Length = 491

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVVFTPGKMPYIYNALVVKG--RDTSGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
           P +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 PFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGDEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|108796670|ref|YP_636546.1| CF1 beta subunit of ATP synthase [Zygnema circumcarinatum]
 gi|118573783|sp|Q32RI0|ATPB_ZYGCR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|61393654|gb|AAX45796.1| CF1 beta subunit of ATP synthase [Zygnema circumcarinatum]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I       +    +   + + ++ +G+N      +   +V ++  D  V    + 
Sbjct: 19  GRITQIIGPVLDASFPPGKMPNIYNALIIKGQNPAGQEINITCEVQQLLGDNKVRAVAMS 78

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+PID    +     ++ I    P  
Sbjct: 79  ATDGLMRGMEVTDTGAPLSVPVGESTLGRIFNVLGEPIDNLGPVDAA-TTLPIHRSAPAF 137

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 138 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 197

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 198 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 257

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 258 FRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 315

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 316 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 375

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +       +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 WIVGTEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLVVARARKVERFLSQP 432


>gi|25808415|gb|AAN74334.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808417|gb|AAN74335.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|115522308|ref|YP_779219.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisA53]
 gi|122297999|sp|Q07UZ5|ATPB_RHOP5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115516255|gb|ABJ04239.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisA53]
          Length = 476

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 104/413 (25%), Positives = 188/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +  N+  + +V   +    V    +   E 
Sbjct: 7   QNGRITQVIGAVVDVQFEGHLPAILNAIETKNGNNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    +   +    I ++ P   ++ 
Sbjct: 67  LVRGQEVTDTGSPIMVPVGLGTLGRIMNVIGEPVDEQGPV-ANEGLRPIHAEAPLYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +  ++ +++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 364 EHYQTARMVQQVLQKYKSLQDIIAILGMDELSEED-KIAVARARKIERFLSQP 415


>gi|4995111|emb|CAB43998.1| H(+)-transporting ATP synthase [Colona floribunda]
          Length = 487

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|324997446|ref|ZP_08118558.1| F0F1 ATP synthase subunit alpha [Pseudonocardia sp. P1]
          Length = 545

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/449 (21%), Positives = 176/449 (39%), Gaps = 28/449 (6%)

Query: 6   ETLAQLAEDYSKNLV-----VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           E +      Y  +L       + G +S        V  L       + +  +G      G
Sbjct: 9   EEIRSAISSYVSSLESDTSRREVGAVSDTGDGIAHVEGL-PSAMTNELLEFEGG---VRG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + +  + +    +G    I  G  V   G    +     + GRV++ LG  IDG   +
Sbjct: 65  VALNLEQNEIGAVVLGDYTGIEEGQQVTRTGEVLSVPVGEGYLGRVVDPLGNAIDGLGDI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            + D    +  +    M RQ V +  +TGI+ ID  TP+  GQR  V      GK     
Sbjct: 125 -ETDSRRVLELQAASVMERQSVHEPLQTGIKAIDAMTPIGRGQRQLVIGDRKTGKTAVCV 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
            T+++        D     + I   VG++G  +    +        + + +V A + +  
Sbjct: 184 DTIINQKENWASGDPKKQVRCIYVAVGQKGSTIAGVRQSLEDAGALEYTTIVAAPASDPA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +++ A + R I+      P    YP  VF 
Sbjct: 244 GYKWLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++T +  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERCAKLSDDLGAGSMTGLPIIETKANDVSAYIPTNVISITDGQVFLESDLFNQG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K +  SL   + ++ E       G     +D     +
Sbjct: 364 VRPAINVGISVSRVGGDAQVKAMKTVSGSLRLDLSQYRELEAFAAFG---SDLDAASAAS 420

Query: 407 VHQVPIIYDFLKQSPS-DLSSEDVFQEIT 434
           + +   + + LKQ+    ++ +D    I 
Sbjct: 421 LGRGERLVELLKQAQYAPVAVQDQVVSIW 449


>gi|269219862|ref|ZP_06163716.1| ATP synthase F1, alpha subunit [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210767|gb|EEZ77107.1| ATP synthase F1, alpha subunit [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 543

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/435 (20%), Positives = 169/435 (38%), Gaps = 22/435 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +K++  + G+++        V  L       + +  +      LG  + +    + +  +
Sbjct: 25  AKSVSEEVGHVTLTADGIARVEGL-PGTMANELLTFEDG---TLGLAMNLEEREIGVVVL 80

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    I  G  V   G    +     + GR ++ LG+P+DG   +   +    +  + P 
Sbjct: 81  GEFSSIEEGQEVRRTGEVLSVPVGEGYLGRTVDPLGRPLDGLGEIQGVEGRRALELQAPG 140

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD- 188
            M R+ V +  +TGI+ ID   P+  GQR  +      GK      T+L+        D 
Sbjct: 141 VMMRKSVHEPLQTGIKAIDSMIPIGRGQRQLIIGDRQTGKTALAIDTILNQRENWLSGDP 200

Query: 189 ----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAE 243
               + I   +G++G  +               + +V + + +    + +AP T   I +
Sbjct: 201 KKQVRCIYVAIGQKGSTIASVRGTLEKAGAMDYTTIVASPASDPAGFKYLAPYTGSAIGQ 260

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           ++   G +VL++ D +++ A + R ++      P    YP  VF    RLLER      E
Sbjct: 261 HWMYNGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDE 320

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++T +  +    ++ +  I  +V SI DG I L   L    + P VD   SVSR+ 
Sbjct: 321 MGGGSMTGLPLIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVG 380

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     KK+  +L   + ++           +   +D    + + +   I   L+Q  
Sbjct: 381 GDAQIKAMKKVAGTLKITLAQYRAQ---AAFAMFASDLDATTRQQLTRGERIMQLLRQQQ 437

Query: 422 -SDLSSEDVFQEITK 435
            +    ED    +  
Sbjct: 438 YTPYKVEDQVASVWA 452


>gi|119368182|dbj|BAF40431.1| ATP synthase beta subunit [Ceratiosicyos laevis]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTHTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|34500014|gb|AAQ73589.1| ATP synthase beta subunit [Bisgaard Taxon 17]
          Length = 444

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 186/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR++N LG+PID    +G  + +  I    P    +
Sbjct: 59  GLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDERGEIGAEE-NWSIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +  A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMRSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFTHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|4995705|emb|CAB44230.1| H(+)-transporting ATP synthase [Microcos latistipulata]
          Length = 488

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|5758920|gb|AAD50894.1| ATP synthase beta subunit [Xanthorrhoea quadrangulata]
          Length = 496

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|75674631|ref|YP_317052.1| F0F1 ATP synthase subunit beta [Nitrobacter winogradskyi Nb-255]
 gi|118573709|sp|Q3SVJ1|ATPB_NITWN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|74419501|gb|ABA03700.1| ATP synthase F1 subcomplex beta subunit [Nitrobacter winogradskyi
           Nb-255]
          Length = 476

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 189/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +   +  + +V   +    V    +   E 
Sbjct: 7   QVGRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+   A   GR++N +G+P+D    +   DL   I ++ P   ++ 
Sbjct: 67  LVRGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLR-PIHAEAPSYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +  ++ R++  +DI  I G     +      V +   +  FL Q 
Sbjct: 364 EHYQTARLVQQVLQRYKSLQDIIAILGMDELSEED-KLTVARARKVERFLSQP 415


>gi|25808459|gb|AAN74356.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|320096091|ref|ZP_08027691.1| ATP synthase F1 sector alpha subunit [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319976971|gb|EFW08714.1| ATP synthase F1 sector alpha subunit [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 549

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 92/432 (21%), Positives = 168/432 (38%), Gaps = 23/432 (5%)

Query: 7   TLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
            L    E Y    V   + G++         +  L       + +     +   LG  + 
Sbjct: 14  ALDSFMESYRPAQVATEEVGHVIETADGIAHIEGL-PGTMANELLRF---DDGTLGLAMN 69

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++   +    +G    I  G  V   G    +     + GR ++ LG+PIDG   +   +
Sbjct: 70  LDQREIGAVILGDFGGIEEGQAVHRTGEVLSVPVGEGYLGRTVDPLGRPIDGLGEITAVE 129

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  + P  M R+ V +   TG++ ID   P+  GQR  +      GK      T+L
Sbjct: 130 GRRALELQAPGVMMRKSVHEPLATGLKAIDSMIPVGRGQRQLIIGDRKTGKTAIALDTIL 189

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +        D     + I   +G++G  +               + +V + + +    + 
Sbjct: 190 NQRDNWKSGDPAKQVRCIYVAIGQKGSTIASVRSTLEDAGAMEYTTIVASPASDPAGYKY 249

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           MAP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    R
Sbjct: 250 MAPYTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSR 309

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P 
Sbjct: 310 LLERCAKLSDELGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPA 369

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           VD   SVSR+   A     KK+  +L   + ++   R +     +   +D    + + + 
Sbjct: 370 VDVGISVSRVGGDAQPKAMKKVAGTLKLTLAQY---RSMAAFAMFASDLDAATRRQLTRG 426

Query: 411 PIIYDFLKQSPS 422
             + + LKQ  S
Sbjct: 427 ERLMELLKQPQS 438


>gi|253729564|ref|YP_003029747.1| AtpB [Bambusa oldhamii]
 gi|246367074|gb|ACS94685.1| AtpB [Bambusa oldhamii]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 180/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I  I      +T     +       VV   K+ D  G+ I +  ++        V 
Sbjct: 19  STGRIDQIIGPVLDITFPPGKLPYIYNALVV---KSRDTAGKQINVTCEVQQLLGNNRVR 75

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+PID    +     +  I  
Sbjct: 76  AVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHR 134

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 135 SAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 194

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 195 GVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTAL 254

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 255 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 313

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 314 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 372

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 373 TMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 431

Query: 418 KQS 420
            Q 
Sbjct: 432 SQP 434


>gi|222356616|gb|ACM48838.1| ATPase alpha subunit [Dioscorea bulbifera]
          Length = 369

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 153/371 (41%), Gaps = 19/371 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQMNSRGTSQSETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ MAP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 240 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQ 356

Query: 405 KAVHQVPIIYD 415
             +++   + +
Sbjct: 357 ALLNRGARLTE 367


>gi|4995053|emb|CAB43983.1| H(+)-transporting ATP synthase [Adansonia rubrostipa]
          Length = 485

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|86359451|ref|YP_471343.1| F0F1 ATP synthase subunit beta [Rhizobium etli CFN 42]
 gi|118573730|sp|Q2K3H0|ATPB_RHIEC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86283553|gb|ABC92616.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium
           etli CFN 42]
          Length = 475

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 184/414 (44%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G ++ +      V    +   + + +      +  + +V   +  + V    +   E
Sbjct: 7   RSVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSE 66

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR++N +G+P+D    L        I    P  + +
Sbjct: 67  GLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTA-HKRAIHQDAPAYVEQ 125

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 126 STEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 185

Query: 196 GERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +   + +        G    K+ +V    +E P  R    LT +T+AE+F  
Sbjct: 186 GERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRD 245

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +     +I
Sbjct: 246 QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTTTG--SI 303

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D     
Sbjct: 304 TSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVG 363

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 364 EEHYEVARKVQSTLQRYKALQDIIAILGMDELSEED-KLAVARARKIERFLSQP 416


>gi|25808481|gb|AAN74367.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|30959120|gb|AAO73319.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNSIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|307638075|gb|ADN80525.1| Flagellum-specific ATP synthase [Helicobacter pylori 908]
 gi|317014791|gb|ADU82227.1| flagellum-specific ATP synthase [Helicobacter pylori Gambia94/24]
 gi|325996678|gb|ADZ52083.1| Flagellum-specific ATP synthase [Helicobacter pylori 2018]
 gi|325998269|gb|ADZ50477.1| Flagellum-specific ATP synthase [Helicobacter pylori 2017]
          Length = 434

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 159/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FVEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLASIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|331653353|ref|ZP_08354358.1| flagellar protein export ATPase FliI [Escherichia coli M718]
 gi|331049451|gb|EGI21523.1| flagellar protein export ATPase FliI [Escherichia coli M718]
          Length = 457

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRMFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|108807199|ref|YP_651115.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua]
 gi|108812457|ref|YP_648224.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|108776105|gb|ABG18624.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516]
 gi|108779112|gb|ABG13170.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua]
          Length = 506

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 161/468 (34%), Positives = 242/468 (51%), Gaps = 34/468 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 39  LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 96

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF------------------ 93
            +   +V+  N   +++ P+   E I  G  V+      G                    
Sbjct: 97  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSF 156

Query: 94  ---RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
              ++       GRV++   KP+DG  +   G     +++     + R  + +    G+R
Sbjct: 157 ASKQLPLGPELLGRVLDGSAKPLDGLPAPETG-YRAPLITPPINPLQRTAIVQVLDVGVR 215

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ L
Sbjct: 216 TINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENIL 275

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G +   +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REI
Sbjct: 276 GAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREI 335

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R
Sbjct: 336 ALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSAR 395

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGH+VL+R LAE G YP +D  AS+SR        D    V     L+  ++  RD+
Sbjct: 396 AILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDL 455

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +G Y  G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 456 ISVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFDDACQHLKVL 503


>gi|24940182|emb|CAD43373.1| ATP synthase beta subunit [Ehretia cymosa]
          Length = 489

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850914|gb|AAC72149.1| ATP synthase beta subunit [Stirlingia latifolia]
          Length = 490

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|90418835|ref|ZP_01226746.1| ATP synthase, beta subunit [Aurantimonas manganoxydans SI85-9A1]
 gi|90336915|gb|EAS50620.1| ATP synthase, beta subunit [Aurantimonas manganoxydans SI85-9A1]
          Length = 484

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 194/441 (43%), Gaps = 26/441 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICP 74
           + N     G ++ +      V        + + +      +  + +V   +  + V    
Sbjct: 4   NANTTGSTGRVAQVIGAVVDVEFDEGLPAILNALECDNHGNRLVLEVAQHLGENTVRTIA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           + + E +  G  V   G    +       GR++N +G+PID    + K +    I  + P
Sbjct: 64  MDLTEGLVRGQPVTDTGGPIEVPVGDGTLGRIMNVIGEPIDEVGPI-KYESKRGIHQEAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             + +    +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 123 AYIEQSPESQILVTGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYS 182

Query: 191 IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLT 237
           + + VGER RE  +   + +   +              K+ +V    +E P  R    LT
Sbjct: 183 VFAGVGERTREGNDLYHEMIESGVNKDPHENNGSAEGSKAALVYGQMNEPPGARARVALT 242

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +TIAE+F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI
Sbjct: 243 GLTIAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI 302

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +   KG+IT+V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S 
Sbjct: 303 --TTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSN 360

Query: 358 SRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+        +   +   +  ++ +++  +DI  I G     +      V +   I  F
Sbjct: 361 SRMLSPMIIGEEHYDVARRVQEILQKYKSLQDIIAILGMDELSEED-KLTVARARKIERF 419

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L Q        +VF     +L
Sbjct: 420 LSQP---FFVAEVFTGAPGQL 437


>gi|86747391|ref|YP_483887.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris HaA2]
 gi|118573733|sp|Q2J3I4|ATPB_RHOP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86570419|gb|ABD04976.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris HaA2]
          Length = 476

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 188/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +  ++  + +V   +    V    +   E 
Sbjct: 7   QTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    +   +    I ++ P   ++ 
Sbjct: 67  LVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPV-ANEGLRPIHAEAPTYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +  ++ +++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 364 EHYQTARMVQQVLQKYKSLQDIIAILGMDELSEED-KLAVARARKIERFLSQP 415


>gi|6689562|emb|CAB65490.1| ATP synthase beta subunit [Verbascum thapsus]
          Length = 498

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TXEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|146305082|ref|YP_001185547.1| FliI/YscN family ATPase [Pseudomonas mendocina ymp]
 gi|145573283|gb|ABP82815.1| ATPase, FliI/YscN family [Pseudomonas mendocina ymp]
          Length = 452

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 153/436 (35%), Positives = 238/436 (54%), Gaps = 12/436 (2%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLD 68
           Q A   + + V   G +S+++ +     C      +G+   V +   S+ L +++    D
Sbjct: 15  QAARLGTLSAVQVSGRVSAVSGILL--ECQVPAAKVGELCEVSKADGSNMLAEIVGFTPD 72

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD--DSL-GKGDL 124
              +  +G  + I +G  +   G   RI       G V++  G+P+ G    +  G  D 
Sbjct: 73  CTLLSALGTPDGIQVGATIRPLGIAHRIGVDDSLLGSVLDGFGRPLLGQAQGAFAGPHDA 132

Query: 125 S--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              + +++   P   R R+     TGIR ID    L  GQR+G+FAG+G GK+TL++  A
Sbjct: 133 RQTLPVIADALPPTQRPRITTALPTGIRSIDSAMLLGEGQRVGLFAGAGCGKTTLMAELA 192

Query: 183 RSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R+   D ++  L+GERGRE+REF+  +      K+SV+V ATSD S + R  A  TA  I
Sbjct: 193 RNMACDVIVFGLIGERGRELREFLDHELDDTLRKRSVLVCATSDRSSMERARAAFTATAI 252

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE + ++G  VLL++DS+TRFA + REI   +GE     G P SV++ LP+L+ER G SE
Sbjct: 253 AEAYRARGLKVLLLIDSLTRFARAQREIGIAAGEPLGRGGLPPSVYTLLPQLVERAGMSE 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIV++R LAE+G YP +D  AS+SR+ 
Sbjct: 313 S--GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVMSRKLAEKGHYPAIDVPASISRVL 370

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                 + ++  + L  L+  + +   +  +G Y+PG D + D AV     I  FL+Q  
Sbjct: 371 SNVAPREHQRANNRLRRLMAAYRQVEMLLRLGEYQPGTDPVTDCAVQLHEPINAFLRQDL 430

Query: 422 SDLSSEDVFQEITKKL 437
            + S   V  E   +L
Sbjct: 431 REPSPLPVTLEALMQL 446


>gi|104784434|ref|YP_610932.1| F0F1 ATP synthase subunit beta [Pseudomonas entomophila L48]
 gi|122985703|sp|Q1I2I7|ATPB_PSEE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|95113421|emb|CAK18149.1| ATP synthase F1, beta subunit [Pseudomonas entomophila L48]
          Length = 458

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 191/408 (46%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDAVPSVYNALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G D+V       +       GR+++ LG PID    +G+ +    I  K P    +
Sbjct: 60  GLKRGLDVVDTKAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RRGIHRKAPSFAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V +   I  FL Q 
Sbjct: 357 RQVQYVLQRYKELKDIIAILGMDELS--ETDKQLVARARKIQRFLSQP 402


>gi|114322016|ref|YP_743699.1| F0F1 ATP synthase subunit beta [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310606|sp|Q0A4M8|ATPB_ALHEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114228410|gb|ABI58209.1| ATP synthase F1 subcomplex beta subunit [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 458

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  +      V      V  + D ++   +      Q  ++   +V    +G  +
Sbjct: 1   MSSGKIVQVIGAVVDVEFPQDQVPKIYDALIVDERGLTLEVQ-QQLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +   + V   G+   +       GR+++ LG+P+D   ++ + +    I    P    +
Sbjct: 60  GLKRSEKVSATGKPISVPVGKGTLGRIMDVLGEPVDEKGAV-ETEERWGIHRSAPSFAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGAELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHAGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  +G ++L+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILM 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V 
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL R +AE G YP VDPL S SR  D     +E   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLARGIAELGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E RDI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQGVLQRYKELRDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 402


>gi|331004505|ref|ZP_08327975.1| ATP synthase subunit beta [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330410683|gb|EGG90106.1| ATP synthase subunit beta [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 463

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I+ I      +         + + +     +     +V   +  DIV    +G  + +
Sbjct: 7   GKITQIIGAVLDIKFSRGHLPQINEAIKIDTADGVLTVEVAQHLGDDIVRTIAMGSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+ ID  +   K +  + I  K P    +  
Sbjct: 67  VRGMEAKATGAPISVPVGENTLGRIFNVLGEVIDKKEP-PKVEEYLPIHRKAPSFEEQST 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 126 QTEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G  +VLL 
Sbjct: 186 RTREGNDLYHEMTDSGVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPANTFAHLDATTVLDRSIVEMGIYPAVDPLGSTSRILSPHIVGEEHYQVAQ 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  + G     +      V +   I  FL Q 
Sbjct: 364 RVQEVLQKYKELQDIIAMLGMDELSEED-KLTVARARKIQRFLSQP 408


>gi|257853482|gb|ACV71743.1| ATP synthase beta subunit [Bergia texana]
          Length = 486

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+N+   GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRNTT--GQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|189183875|ref|YP_001937660.1| ATP synthase alpha chain [Orientia tsutsugamushi str. Ikeda]
 gi|226739920|sp|B3CSS9|ATPA_ORITI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|189180646|dbj|BAG40426.1| ATP synthase alpha chain [Orientia tsutsugamushi str. Ikeda]
          Length = 512

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 101/435 (23%), Positives = 183/435 (42%), Gaps = 28/435 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE   +L+E      + + GY+ SI      V  LS     G+ +     ++   G
Sbjct: 12  LKKQLEDFDELSE------LSEVGYVISIGDGIAKVYGLSNAYS-GEILQF---STGTKG 61

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
            V  +  +++    +G  ++I  G  V       ++       GRV++A+G PIDG    
Sbjct: 62  IVFSLKDNLIEAVVIGSDDQIKQGSQVKRTQTSLKVPTGKELLGRVVDAVGNPIDGKGEF 121

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 +++  K P  M R  V +   TGI+ ID   P+  GQR  +      GK+ +  
Sbjct: 122 I-NPTYLDVEVKAPSVMCRDSVNEPMYTGIKAIDALIPIGKGQRELIIGDRQTGKTAIAI 180

Query: 180 MFARSDC----------FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
               +                I   +G++   V + ++          + VV++++ ++ 
Sbjct: 181 DIILNQKRFHLSDQEREKVYCIYVAIGQKRSTVAQLVKKLQETGAMAYTTVVLSSASDAA 240

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP T   I EYF   G + L+I D +++ A + R+I+      P    YP  VF 
Sbjct: 241 SLQYLAPYTGCAIGEYFRDNGMHALVIYDDLSKHAIAYRQISLLLRRPPAREAYPGDVFY 300

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER     K   +G++TA+  V     + +  I  ++ SI DG I L   L  +G
Sbjct: 301 LHSRLLERAAKLNKAKGEGSLTALPIVETQNSDVSAYIPTNIISITDGQIFLESELFYKG 360

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A     K +  ++   + ++ E         +   +D    + 
Sbjct: 361 TKPALNVGISVSRVGAAAQIKAMKDIAGTVKLELAQYHEME---AFSQFGADLDSSSMQL 417

Query: 407 VHQVPIIYDFLKQSP 421
           +++   + + LKQS 
Sbjct: 418 INRGRRLSELLKQSQ 432


>gi|153853574|ref|ZP_01994954.1| hypothetical protein DORLON_00944 [Dorea longicatena DSM 13814]
 gi|149753729|gb|EDM63660.1| hypothetical protein DORLON_00944 [Dorea longicatena DSM 13814]
          Length = 506

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 180/423 (42%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  ++Y       + G + S+     +V  +  +   G+ V  +       G V 
Sbjct: 15  ISILKEEIKNYDVISRDQEVGTVISVGDGIASVYGI-DHAMYGEIVTLETG---LKGMVQ 70

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + +     G   EI  G  V   G+   I     + GR+++ALG PIDG   + K 
Sbjct: 71  DIKENEISCILFGDDSEIKQGTKVCRTGKKAGIPVGEGYIGRIVDALGAPIDGKGEI-KA 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    + ++ P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++ +   
Sbjct: 130 DGYRPVENEAPGIVDRKSVSVPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIATDTI 189

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V   + D    D L  + V  +T+ E   L+ + P +A 
Sbjct: 190 INQKGKDVICIYVAIGQKASTVARLVNDLKAHDALDYTTVFCSTASECAPLQYIVPYSAT 249

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +G +VL++ D +++ A + R I+   G  P    YP  VF    RLLER   
Sbjct: 250 ALAEYFMYQGKDVLIVYDDLSKHAVAYRAISLLLGRSPGREAYPGDVFYLHSRLLERSSR 309

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 310 LSEEAGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNAGMRPAVNVGLSV 369

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   S+   + +    R++     +   +D      +     + + L
Sbjct: 370 SRVGGAAQTKAMKKASGSVRIDLAQ---AREMESFTQFSSDLDEATKNQLKYGSCLTELL 426

Query: 418 KQS 420
           KQ 
Sbjct: 427 KQP 429


>gi|56675514|emb|CAB44250.2| H(+)-transporting ATP synthase [Pterospermum celebicum]
          Length = 482

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|30351921|emb|CAD48408.1| ATP synthase beta subunit [Scilla spetana]
          Length = 495

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/424 (26%), Positives = 186/424 (43%), Gaps = 29/424 (6%)

Query: 20  VVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------V 70
           V   G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V
Sbjct: 17  VKNLGRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRV 74

Query: 71  YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I 
Sbjct: 75  RAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIH 133

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
              P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +     
Sbjct: 134 RSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 193

Query: 190 VIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTA 238
             +S+ G   ER RE  +   +               K  +V    +E P  R    LTA
Sbjct: 194 GGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTA 253

Query: 239 VTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 254 LTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 313

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S 
Sbjct: 314 --TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST 371

Query: 358 SRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           S +        +  +    +   + R++E +DI  I G     +      V +   I  F
Sbjct: 372 STMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERF 430

Query: 417 LKQS 420
           L Q 
Sbjct: 431 LSQP 434


>gi|333004045|gb|EGK23579.1| flagellar protein export ATPase FliI [Shigella flexneri K-272]
 gi|333017818|gb|EGK37125.1| flagellar protein export ATPase FliI [Shigella flexneri K-227]
          Length = 457

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 157/432 (36%), Positives = 235/432 (54%), Gaps = 18/432 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG   
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGL-P 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
                 +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 133 FPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSSEDV 429
           +Q   + +  + 
Sbjct: 433 QQGIFERADWEA 444


>gi|327543131|gb|EGF29567.1| flagellum-specific ATP synthase [Rhodopirellula baltica WH47]
          Length = 467

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 168/439 (38%), Positives = 249/439 (56%), Gaps = 10/439 (2%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQ 61
            N ET+ Q     S  L    G ++S+T    TV  ++    LG    +        L +
Sbjct: 15  PNPETIRQSLG--SLVLSQIRGRVASVTGDAVTVQGMT--APLGAICELMPPDAKPTLAR 70

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           VI  +     + P+     ++ GD V    R   +      CGRVI+A G+PIDG   L 
Sbjct: 71  VIGFDDTRPILAPMEAISALAAGDRVRLVSRSLTLRVGDSLCGRVIDAFGRPIDGK-PLS 129

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
              + +      P +++R  +++  +TG+R ID       GQR+G+FAGSG+GKSTLL M
Sbjct: 130 DDLVRVSASRAAPDSLDRPPIDEPLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLLGM 189

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
             R    D+++I++VGERGREV+EF++       LK+SVVVVATSD+    R  A  TA 
Sbjct: 190 LTRGTTADRIVIAMVGERGREVQEFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTAT 249

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE F  +G  VLL++DS+TRFA + RE+   +GE P  RGYP SVF+ LP+L+ER G 
Sbjct: 250 AIAEQFRDEGHRVLLLVDSVTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAGR 309

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           + K  G+ITA  +VLV+GD++N+PI+D+VR +LDGHIVLNR LA  G YPP+D   S+SR
Sbjct: 310 TTK--GSITAFYTVLVEGDDNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISR 367

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +A+   + +  +    +   + +++ + D+  IG YR G D  +D A+     I D L+Q
Sbjct: 368 VANHLVTPETYQATLGIREHMVQYQTSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQ 427

Query: 420 SPSDLSSEDVFQEITKKLQ 438
             ++++     Q   +KL 
Sbjct: 428 DANEITPIADSQARVQKLH 446


>gi|212896666|gb|ACJ38536.1| membrane-bound ATP synthase subunit B [Ophrestia radicosa]
          Length = 461

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|57868930|gb|AAW57461.1| ATP synthase beta subunit [Impatiens auricoma]
          Length = 493

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 17  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHKSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNFGESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|260656827|gb|ACX47804.1| ATPase [Vibrio casei]
          Length = 464

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 94/422 (22%), Positives = 173/422 (40%), Gaps = 27/422 (6%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
           +     +  L+  V  G+ +   G         + +  D V    +G    +  G  V  
Sbjct: 1   SDGIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYANLQEGMKVTG 56

Query: 90  WGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            GR   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG
Sbjct: 57  TGRILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFI 206
            + +D   P+  GQR  +      GK+ +      +  D     I   +G++   +   +
Sbjct: 116 YKSVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQRDSGIFSIYVAIGQKASTIANVV 175

Query: 207 EDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
                      ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A +
Sbjct: 176 RKLEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVA 235

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVIS 312
            R+I+      P    +P  VF    RLLER     +               G++TA+  
Sbjct: 236 YRQISLLLKRPPGREAFPGDVFYLHSRLLERASRVSEHYVENFTKGEVKGKTGSLTALPI 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL
Sbjct: 296 IETQAGDVSAFVPTNVISITDGQIFLQTELFNAGIRPAVDPGISVSRVGGSAQTKIIKKL 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              +   + ++ E   +     +   +D    + ++    + + +KQ     +   VF +
Sbjct: 356 SGGIRTALAQYRE---LAAFAQFSSDLDATTKRQLNHGQKVTELMKQKQ--YAPFSVFDQ 410

Query: 433 IT 434
             
Sbjct: 411 AL 412


>gi|212896634|gb|ACJ38520.1| membrane-bound ATP synthase subunit B [Cajanus cajan]
          Length = 470

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   DN+GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|114564219|ref|YP_751733.1| F0F1 ATP synthase subunit alpha [Shewanella frigidimarina NCIMB
           400]
 gi|122298941|sp|Q07YM0|ATPA1_SHEFN RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|114335512|gb|ABI72894.1| ATP synthase F1, alpha subunit [Shewanella frigidimarina NCIMB 400]
          Length = 517

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 120/443 (27%), Positives = 189/443 (42%), Gaps = 17/443 (3%)

Query: 2   QKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++    L Q    +S  L   + G I+SI +    V+ L   V   + +      SD  G
Sbjct: 13  EQTFSILQQARRSFSPQLQPREIGTITSIATGIAKVSGL-PGVGFEEILKFP---SDIFG 68

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               ++ D +    +G    +  GD V   G    +       GR+IN +G+P+DG   L
Sbjct: 69  IAFNVDEDEIGAVLLGDYWHLQAGDEVERCGHLVDVPVGEGLLGRIINPIGEPLDGKGRL 128

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 + I    P  MNR  V    +TGI+VID   P+  GQR  +      GK+ +  
Sbjct: 129 IAS-ARLPIERPSPAIMNRAPVSVPLQTGIKVIDALIPVGLGQRELILGDRQTGKTAIAV 187

Query: 180 MFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
               +  D     +   +G+R   V + I         + +VVVV   ++ P L  +AP 
Sbjct: 188 DTILNQRDKNVLCVYCAIGQRASGVAKVIATLHEQGALEYTVVVVTEGNDPPGLAYIAPY 247

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF  +G NVL++ D +T  A + RE++      P    +P  +F    RLLER
Sbjct: 248 AATSIAEYFMQQGRNVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLER 307

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G++TA+  +  +  + +  I  ++ SI DG I L+ SL E G  P +D  
Sbjct: 308 ATHLSPNLGGGSLTALPIIETEAQDISAYIPTNLISITDGQIYLSPSLFELGVLPAIDVG 367

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+  KA  A  + + S+L     +FEE       G       L   K +     I 
Sbjct: 368 KSVSRVGGKAQRAAYRAVASNLKLAYAQFEELETFASFGARLDDSTL---KTIDHGRRIR 424

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
             LKQ+  + +   + ++I   L
Sbjct: 425 ACLKQA--ESTPISMIEQIAVLL 445


>gi|318605260|emb|CBY26758.1| flagellum-specific ATP synthase FliI [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 455

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 160/446 (35%), Positives = 243/446 (54%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L ++ +  E  S++  + + G ++  T +    T L   + LG   + +    G+  +  
Sbjct: 10  LASMDKFEERISQSTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDNGEVQEVE 67

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+     G      ++       GRV++   KP
Sbjct: 68  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARITTGGASASKQLPLGPELLGRVLDGSAKP 127

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 128 LDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 186

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 187 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLR 246

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 247 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 306

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 307 ALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 366

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+   P
Sbjct: 367 DIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIALYP 426

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + SS +   +  K L
Sbjct: 427 QMEIFLQQGMFERSSYEDACQHLKSL 452


>gi|313199709|ref|YP_004021323.1| ATP synthase CF1 beta subunit [Theobroma cacao]
 gi|309321273|gb|ADO64816.1| ATP synthase CF1 beta subunit [Theobroma cacao]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSTIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|65332600|gb|AAY42224.1| ATP synthase beta subunit [Anisophyllea disticha]
          Length = 479

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVXQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSFFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 416


>gi|61968287|gb|AAX57070.1| ATP synthase beta subunit [Phyllanthus cf. decipiens Hoffmann et
           al. 162]
          Length = 479

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTFPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|6689307|emb|CAB65433.1| ATP synthase beta subunit [Sesamum indicum]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6688527|emb|CAB65168.1| ATP synthase beta subunit [Solanum lycopersicum]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATEGLTRGMAVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|319780917|ref|YP_004140393.1| ATP synthase F1 subunit beta [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166805|gb|ADV10343.1| ATP synthase F1, beta subunit [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 477

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 187/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G +  +      V        + + +      +  + +V   +  + V    +   E + 
Sbjct: 10  GKVRQVIGAVVDVQFGDHLPAILNALETTNVGNRLVLEVAQHLGENTVRCIAMDSTEGLV 69

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+IN +G+P+D +  +   ++   I    P  + +   
Sbjct: 70  RGQEVRDTGAPITVPVGPGMLGRIINVIGEPVDEEGPVDAIEMR-SIHQPAPTYVEQSTE 128

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 129 AQILITGIKVLDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGER 188

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   +++        G    K+ +V    +E P  R    LT +T+AEYF  +G 
Sbjct: 189 TREGNDLYHEFIESGVNKKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQ 248

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 249 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSV 306

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            ++ V  D+  DP   +  + LD    LNR++AE+G YP VDPL S SR+ D     DE 
Sbjct: 307 QAIYVPADDLTDPAPATSFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPLVVGDEH 366

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +    + V +   I  FL Q 
Sbjct: 367 YGVARQVQSILQRYKSLQDIIAILGMDELSEED-KQTVARARKIERFLSQP 416


>gi|305671687|gb|ADM63153.1| ATP synthase beta subunit [Myodocarpus fraxinifolius]
          Length = 489

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|237729043|ref|ZP_04559524.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2]
 gi|226909665|gb|EEH95583.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2]
          Length = 460

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 182/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GK S  L    ++   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVMNGKESLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|167567363|ref|ZP_02360279.1| flagellum-specific ATP synthase [Burkholderia oklahomensis EO147]
          Length = 435

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 162/425 (38%), Positives = 229/425 (53%), Gaps = 11/425 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +    G ++ ++ +    +     +  G   V +    D +  QV+  N +  Y+ P  
Sbjct: 15  PVARLTGRLTGVSGLLLKASG--CPLETGRRCVIESSGGDWIDAQVVGFNREESYLMPFK 72

Query: 77  IGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               +  G  V      G  R      W GRVIN LG+PIDG   LG GD  +       
Sbjct: 73  KPVGLVAGAQVLARDRKGALR--VGRAWLGRVINGLGEPIDGHGPLG-GDQVLNEKPAAV 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + ++ V      G+R I+    L  GQR+G+ AGSG+GKS LL M  R+   D V++ 
Sbjct: 130 NPLRKRAVRDVLDVGVRAINGALTLGKGQRVGLMAGSGVGKSVLLGMMTRATAADVVVVG 189

Query: 194 LVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREF+E  LGD  L K+V+VVA +DESP++R  A      IA ++   G +V
Sbjct: 190 LIGERGREVREFVEHALGDEGLAKAVLVVAPADESPLMRLRAAELCHAIAAHYRDAGSDV 249

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  RGYP SVF  LP+L+E  G  E   G+++A+ +
Sbjct: 250 LLLVDSLTRYAMAQREIALSLGEPPATRGYPPSVFGMLPQLVETAGNGEGS-GSMSAIYT 308

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+ NDP+ D+ R+ILDGHIVL+R LAE G YP +D   SVSR   +   A     
Sbjct: 309 VLAEGDDQNDPVVDTARAILDGHIVLSRELAERGHYPAIDVTRSVSRCMAQIADARHVVR 368

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              L  +I R E+ RD+  +GGY  G D   D+AV     I  FL+Q   + +S D    
Sbjct: 369 AGQLKEMIGRHEQVRDLIPLGGYVQGADAATDRAVAMAERIGAFLRQPMHEAASFDETYA 428

Query: 433 ITKKL 437
             + L
Sbjct: 429 ALEAL 433


>gi|130076676|gb|ABO31958.1| ATPase alpha subunit [Altingia excelsa]
          Length = 377

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 157/381 (41%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKNLNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             S    + ++ E       G
Sbjct: 356 RGSSKLELAQYREVAAFAQFG 376


>gi|4995221|emb|CAB44060.1| H(+)-transporting ATP synthase [Hibiscus punaluuensis]
          Length = 485

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|21633389|gb|AAM52169.1| ATP synthase beta subunit [Calycobolus nutans]
          Length = 487

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 184/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + ++ QG+ ++   +V ++  +  V    +     +
Sbjct: 21  GRIVQIIGPVLDVAFSPGKMPNIYNALIVQGRETNVTCEVQQLLGNNRVRAVAMSDTNGL 80

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V   G    +       GR+ N LG+P+D   S+   + S  I    P  +    
Sbjct: 81  TRGMEVIDMGVPISVPVGGSTLGRIFNVLGEPVDNLGSVD-TNTSSPIHRSAPAFIQLDT 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 140 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 199

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 200 RTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 259

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 260 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 317

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 318 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 377

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|186886303|gb|ACC93554.1| ATPase F1 alpha subunit [Juncus turkestanicus]
          Length = 356

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   +       +   +G++   V + ++     N    SV+V AT
Sbjct: 124 TAIAIDTILNQKEMNSQGKESETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 183

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 184 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALMIYDDLSKQAVAYRQMSLLLRRPPGREAFP 243

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 244 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 303

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 304 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 355


>gi|114448860|gb|ABI74953.1| ATP synthase alpha subunit [Echeandia sp. C893]
          Length = 378

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 88/384 (22%), Positives = 157/384 (40%), Gaps = 22/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKATIGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  ++G++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGSLSDHE-RRRVEVKAPGIIERKSVHEPMQSGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNERGASSSETLYCVYVAIGQKRSTVAQLVQILPEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               +++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALDYTILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VA 354

Query: 391 LIGGYRPGVDLILDKAVHQVPIIY 414
               +   +D      +++   + 
Sbjct: 355 AFAQFGSDLDAATQALLNRGARLT 378


>gi|7708153|emb|CAB89913.1| ATP synthase beta subunit [Antirrhinum majus]
          Length = 489

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 19  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTG-TTFPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|319406291|emb|CBI79928.1| ATP synthase beta chain [Bartonella sp. AR 15-3]
          Length = 530

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 106/434 (24%), Positives = 189/434 (43%), Gaps = 25/434 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I  +      V    +   + + +  +   +  + +V   +  + V    +   E 
Sbjct: 56  SVGEIRQVIGAVVDVHFEGELPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTEG 115

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V+  G +  +       GR++N +G+P+D    +        I  + P  + + 
Sbjct: 116 LVRGQKVYDTGAQICVPVGEATLGRIMNVIGEPVDEFGPIMATK-KRSIHQEAPTYIEQS 174

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VG
Sbjct: 175 TESEILVTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVG 234

Query: 197 ERGREVREFIEDYLGDNL------------KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           ER RE  +   + +   +             K  +V    +E P  R    L+ +TIAE 
Sbjct: 235 ERTREGNDLYYEMIESRVNVDPRKHDSTAGSKCALVYGQMNEPPGARARVALSGLTIAES 294

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + 
Sbjct: 295 FRDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKT 352

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D  
Sbjct: 353 GSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPL 412

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q    
Sbjct: 413 IVGEEHYAVACQVQTILQRYKSLQDIIAILGMDELSEED-KLLVARARKIERFLSQP--- 468

Query: 424 LSSEDVFQEITKKL 437
               + F     KL
Sbjct: 469 FHVAEAFTGAPGKL 482


>gi|257462636|ref|ZP_05627046.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. D12]
 gi|317060283|ref|ZP_07924768.1| ATP synthase subunit beta [Fusobacterium sp. D12]
 gi|313685959|gb|EFS22794.1| ATP synthase subunit beta [Fusobacterium sp. D12]
          Length = 465

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEIS 82
           G I+ I S    V    +   + + +  Q    + + +V + +  ++V    +   + + 
Sbjct: 4   GKITQIISAVVDVEFKDELPKIYNALKVQVGERELVLEVQQHLGNNVVRTVAMDSTDGLL 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N LG+P+D    + + +  + I  + P    ++ V
Sbjct: 64  RGMEVRDTGLPITVPVGKAVLGRILNVLGEPVDEKGPI-ETEEYLPIHREAPKFEEQETV 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGER 182

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+   +     +  K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 183 TREGRDLYNEMTESGVLNKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGSLQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R +A  G YP VDPL S S+         +  ++   
Sbjct: 301 ADDLTDPAPATTFSHLDATTVLSRDIAALGIYPAVDPLDSTSKALSPEVVGREHYEVARE 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R+ E +DI  I G     D      V +   I  F  Q 
Sbjct: 361 VQRVLQRYTELQDIIAILGMDELGDED-KLVVSRARKIQRFFSQP 404


>gi|183206612|gb|ACC54504.1| ATP synthase beta subunit [Theilera guthriei]
          Length = 480

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      +     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 3   GRIVQIIGPVLDIAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAIA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKESGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 358 QPRIVSKEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKMERFLSQP 416


>gi|186886241|gb|ACC93523.1| ATPase F1 alpha subunit [Luzula sudetica]
          Length = 368

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/363 (24%), Positives = 156/363 (42%), Gaps = 18/363 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 8   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 67

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 68  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 126

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 127 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 186

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 187 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 246

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 247 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 306

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 307 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLGLAQYRE---VAAFAQFGSDLDA 363

Query: 402 ILD 404
              
Sbjct: 364 ATQ 366


>gi|118917366|dbj|BAF40473.1| ATP synthase beta subunit [Actinostemon concolor]
          Length = 489

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|9799486|gb|AAF98993.1| ATP synthase beta subunit [Paeonia californica]
          Length = 491

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G+  DN+GQ I +  ++        V    
Sbjct: 17  GRISQIIGPVLDVAFPPGKMPNIXNALVVKGQ--DNIGQPINVTCEVQQLLGNNRVRTVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|14718011|gb|AAK72747.1| ATP synthase beta subunit [Clivia nobilis]
          Length = 483

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|25808479|gb|AAN74366.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTGVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + RE++      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREMSLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|186886309|gb|ACC93557.1| ATPase F1 alpha subunit [Juncus monanthos]
          Length = 354

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ LG PID
Sbjct: 3   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPID 62

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 63  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 121

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 122 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 181

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 182 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALMIYDDLSKQAVAYRQMSLLLRRPPGREAFP 241

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 242 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 301

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  S    + ++ E       G
Sbjct: 302 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSFKLELAQYREVAAFAQFG 353


>gi|65332604|gb|AAY42226.1| ATP synthase beta subunit [Anisophyllea meniaudi]
          Length = 479

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVN-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLATKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 416


>gi|124361808|gb|ABN09346.1| ATP synthase beta subunit [Adinandra dumosa]
 gi|124361810|gb|ABN09347.1| ATP synthase beta subunit [Cleyera japonica]
          Length = 465

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|7708499|emb|CAB89937.1| ATP synthase beta subunit [Morus nigra]
          Length = 486

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V  G   D +GQ I +  ++        V    
Sbjct: 20  GRIAQIIGPVLDVAFPPGKMPNIYNALVVXG--RDTVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTXLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|254455836|ref|ZP_05069265.1| ATP synthase F1, beta subunit [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082838|gb|EDZ60264.1| ATP synthase F1, beta subunit [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 472

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 180/411 (43%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ +      V        +        G N   L     +    V    +   E + 
Sbjct: 4   GIITQVIGAVVDVKFDGDLPEILTALECKNGDNRLVLEVAQHLGESTVRTIAMDATEGLK 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            GD V +     ++       GR+IN +G+PID    + K   +  I    P   ++   
Sbjct: 64  RGDEVTNTNAPIQVPVGPETLGRIINVIGEPIDEKGEV-KTKETWPIHRSAPEFNDQSTE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 182

Query: 199 GREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +   +        K+ +V    +E P  R    LT +T+AEYF  +   
Sbjct: 183 TREGNDLYHEMIDSGVIKTDGEGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 242

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 243 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITSV 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     D  
Sbjct: 301 QAIYVPADDLTDPAPATSFAHLDATTVLSRQIAEIGIYPAVDPLDSTSRILDPRIVGDEH 360

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 361 YRVAREVQKVLQTYKSLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 410


>gi|15425564|emb|CAC60246.1| ATP synthase beta subunit [Crispiloba disperma]
          Length = 489

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|60391817|sp|P69369|ATPB_NICBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|60391818|sp|P69370|ATPB_NICPL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11746|emb|CAA43609.1| ATPase subunit beta [Nicotiana quadrivalvis var. bigelovii]
 gi|11757|emb|CAA43613.1| ATPase subunit beta [Nicotiana plumbaginifolia]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|85713719|ref|ZP_01044709.1| ATP synthase subunit B [Nitrobacter sp. Nb-311A]
 gi|85699623|gb|EAQ37490.1| ATP synthase subunit B [Nitrobacter sp. Nb-311A]
          Length = 476

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 189/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +  ++  + +V   +    V    +   E 
Sbjct: 7   QIGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+   A   GR++N +G+P+D    +   DL   I ++ P   ++ 
Sbjct: 67  LVRGQEVSDTGAPIRVPVGAGTLGRIMNVIGEPVDEGGPIKADDLR-PIHAEAPSYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +T+AE F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEQFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +  ++ R++  +DI  I G     +      V +   +  FL Q 
Sbjct: 364 EHYQTARMVQQVLQRYKSLQDIIAILGMDELSEED-KLTVARARKVERFLSQP 415


>gi|187764072|ref|YP_001876521.1| ATPase subunit 1 [Dictyostelium fasciculatum]
 gi|160688780|gb|ABX45195.1| ATPase subunit 1 [Dictyostelium fasciculatum]
          Length = 527

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 187/406 (46%), Gaps = 15/406 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G +  I      V+ L+  + +G+ V   GKN    G  + +    V I   G  + I 
Sbjct: 50  FGRVLYIKDGVVKVSGLN-SIKVGEKVEFIGKN--LFGMALNLESTGVGIVIFGEDKLIH 106

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQ 139
            G +V    + F I       GRV++ LG+PIDG  +      +  I    K P  + R+
Sbjct: 107 EGVIVKRCEQNFAIKIDRAMLGRVVDVLGQPIDGGVAFKDTKTTRLISLERKAPGIVTRK 166

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
            V +   TG++++D   P+  GQR  +      GKS++      +   +K I+ +   VG
Sbjct: 167 SVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSSIAIDAILNQKTNKDIVCVYVSVG 226

Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   +R  +E      +LK S+VVV+T+ ++  L+ +AP T   I EYF  KG++ L+I
Sbjct: 227 QKKSTIRRLVEMLNVKGSLKYSIVVVSTASDASPLQFLAPYTGCAIGEYFRDKGEHALII 286

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI--TAVISV 313
            D +++ A + R+++      P    YP  VF    RLLER      + GN   TA   V
Sbjct: 287 YDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERSAKLNAKYGNGSLTAFPIV 346

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  ++ SI DG I L + L  +G  P V+   SVSR+   A SA  KKL 
Sbjct: 347 ETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGLSVSRVGSAAQSAVMKKLA 406

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +L   + ++ E   +     +    D++  + + +   + + LKQ
Sbjct: 407 GALKLELAQYRE---LARFEQFSSNNDVVTLQLLKKGKNVIEILKQ 449


>gi|149911798|ref|ZP_01900402.1| ATP synthase subunit B [Moritella sp. PE36]
 gi|149805144|gb|EDM65166.1| ATP synthase subunit B [Moritella sp. PE36]
          Length = 461

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 186/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  I      V    Q V              S+ + +V + I   +V    +G 
Sbjct: 1   MSTGIIVQIIGAVVDVEFPQQSVPQVYDALTFDDTDLSELVLEVQQQIGGGVVRCIVMGS 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G    +       GR++N LG PIDG  ++   D+  EI    P   
Sbjct: 61  SDGLRRGLKVTNTGSAISVPVGDACLGRIVNVLGNPIDGKGAI-PTDVRYEIHRAAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TG++VID+  P   G ++G+F G+G+GK+  +     +         + +
Sbjct: 120 EQSLSNELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +     +  K  +V    +E P  R    LT +++AE F  +G +V
Sbjct: 180 GVGERTREGNDFYYEMEEAGVLDKVAMVYGQMNEPPGNRLRVALTGLSMAERFRDEGKDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +
Sbjct: 240 LLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGILQERI--TSTKSGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLNRNIASMGMYPAIDPLDSTSRQLDPLVVGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R+ E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 IARGVQGVLQRYTELKDIIAILGMDELSEED-KQIVSRARKIQRFLTQP 405


>gi|6687737|emb|CAB65057.1| ATP synthase beta subunit [Hydrolea ovata]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D+LGQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSLGQPINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAAISVPVGGSTLGRIFNVLGEPVDDLGPVDASTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESKVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYQTAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|57868928|gb|AAW57460.1| ATP synthase beta subunit [Pentamerista neotropica]
          Length = 486

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|238899337|ref|YP_002925020.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229467098|gb|ACQ68872.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 460

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 188/406 (46%), Gaps = 12/406 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
            G I  I      V    + V  + + +  +      + +V + +   +V    +G  + 
Sbjct: 3   TGKIIQIIGAVVDVEFPQEAVPKVYNALEVKNDAIKLVMEVQQQLGGGVVRCIAMGSSDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   ++       GR++N LG PID    +G+ +    I  + P      
Sbjct: 63  LQRGLTVTDLGHPIKVPVGKETLGRIMNVLGDPIDMKGPIGEQE-RWSIHRQPPSYEELA 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 122 NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 181

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +VLL 
Sbjct: 182 ERTREGNDFYHEMTESGVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF 241

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V V
Sbjct: 242 IDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYV 299

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R +A  G YP VDPL S SR  D      +   +  
Sbjct: 300 PADDLTDPSPATTFAHLDATAVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVAR 359

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +     AV +   I  FL Q 
Sbjct: 360 GVQSILQRYQELKDIIAILGMDELSEED-KLAVSRARKIQRFLSQP 404


>gi|261867032|ref|YP_003254954.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412364|gb|ACX81735.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 457

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 186/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVETGLTLEVQQQLG--GGVVRCIALGASD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +     ++       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEE-RWSIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|186886247|gb|ACC93526.1| ATPase F1 alpha subunit [Juncus capitatus]
          Length = 362

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 89/361 (24%), Positives = 156/361 (43%), Gaps = 18/361 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 6   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 66  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 124

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 125 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 184

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 185 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 244

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 245 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 304

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   ++ 
Sbjct: 305 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLEA 361

Query: 402 I 402
            
Sbjct: 362 A 362


>gi|14718230|gb|AAK72853.1| ATP synthase beta subunit [Spigelia marilandica]
          Length = 492

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 44  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 104 IFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 162

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 163 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 222

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 223 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 282

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 283 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 340

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 341 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 400

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 401 ILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|150015308|ref|YP_001307562.1| F0F1 ATP synthase subunit beta [Clostridium beijerinckii NCIMB
           8052]
 gi|190358655|sp|A6LQH6|ATPB_CLOB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149901773|gb|ABR32606.1| ATP synthase F1, beta subunit [Clostridium beijerinckii NCIMB 8052]
          Length = 463

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 118/406 (29%), Positives = 193/406 (47%), Gaps = 14/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S  +  L + +V +  + + + +V   +  DIV    +   E +
Sbjct: 6   GKVVQVIGPVIDIKFDSDSLPDLYNAIVIKAGDYELVAEVEQHVGDDIVRTIAMSATEGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V       +       GR+ N LGKPID    + +      I    P   ++  
Sbjct: 66  KRGMDAVDTGAPISVPVGEEVLGRLFNVLGKPIDKCGDI-EVKQEYPIHRPAPSFKDQSV 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 125 EPEMFETGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKQHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG +VLL +
Sbjct: 185 RSREGNDLYHEMRESGVIDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFI 244

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I R+  +  E++   G  P A GY  ++ +E+  L ERI  +    G+IT+V +V V 
Sbjct: 245 DNIFRYTQAGSEVSALLGRTPSAVGYQPTLATEMGALQERI--TSTVNGSITSVQAVYVP 302

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +  K+ + 
Sbjct: 303 ADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLESTSRILDPRIVGEEHYKVAAD 362

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
           + H++ ++++ +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 363 VKHVLEKYKQLQDIIAILGVDELGDE--DKAVVARARRIQRFLSQP 406


>gi|229002312|dbj|BAH57919.1| ATP synthase beta subunit [Potamogeton maackianus]
          Length = 491

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +G+ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGNMPNIYNALVV---KGRDTVGEQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 78  AMSATDGLRRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTHTTS-PIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPWIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|224830574|gb|ACN66382.1| ATP synthase beta chain [Sciadotenia toxifera]
          Length = 487

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|213691224|ref|YP_002321810.1| ATP synthase F1, alpha subunit [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254807679|sp|B7GTZ1|ATPA_BIFLI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|213522685|gb|ACJ51432.1| ATP synthase F1, alpha subunit [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457285|dbj|BAJ67906.1| ATP synthase alpha subunit [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 543

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 94/421 (22%), Positives = 174/421 (41%), Gaps = 21/421 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + GY+++       VT L       + +  +      LG    ++   + +  +G    I
Sbjct: 31  EVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAFNLDAREIGVVILGDFAGI 86

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV++ LGKPIDG   +   +    + ++ P  M+R  
Sbjct: 87  EEGQEVRRTGEVLSVPVGDGYLGRVVDPLGKPIDGLGEIQNIEGRRILEAQAPDVMHRHP 146

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++   TG++ ID  TP+  GQR  +      GK      T+++  A  +  D     + 
Sbjct: 147 VDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTIINQKANWESGDPKKQVRC 206

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +    +          + +V + + +S   + +AP T   I +++   G
Sbjct: 207 IYVAIGQKGSTIASVKQSLEDAGAMEYTTIVASPAADSAGFKYIAPYTGSAIGQHWMYNG 266

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G++
Sbjct: 267 KHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKVSDDLGGGSM 326

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  V    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A + 
Sbjct: 327 TGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAQTK 386

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             KK+  +L   + ++       +   +   +D      + +   + + LKQ      S 
Sbjct: 387 ALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLTRGAHLTELLKQPQFHPYSP 443

Query: 428 D 428
           +
Sbjct: 444 E 444


>gi|114448854|gb|ABI74950.1| ATP synthase alpha subunit [Hosta lancifolia]
 gi|114448856|gb|ABI74951.1| ATP synthase alpha subunit [Yucca glauca]
          Length = 383

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 87/384 (22%), Positives = 155/384 (40%), Gaps = 22/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 7   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 63

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 64  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 122

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 123 LIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 182

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 183 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 242

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 243 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 302

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 303 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VA 359

Query: 391 LIGGYRPGVDLILDKAVHQVPIIY 414
               +   +D       ++   + 
Sbjct: 360 AFAQFGSDLDAATQALPNRGARLT 383


>gi|115605029|ref|YP_784480.1| ATP synthase CF1 beta subunit [Piper cenocladum]
 gi|122164355|sp|Q06GQ3|ATPB_PIPCE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112253758|gb|ABI14479.1| ATP synthase CF1 beta subunit [Piper cenocladum]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G+  D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFSPGKMPNIYNALIVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718151|gb|AAK72814.1| ATP synthase beta subunit [Beaucarnea recurvata]
          Length = 483

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGVDELSEED-RLTVARARKIERFLSQP 427


>gi|332105881|gb|AEE01403.1| ATP synthase beta chain [Malva pusilla]
          Length = 486

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHKSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQKLGESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|212896616|gb|ACJ38511.1| membrane-bound ATP synthase subunit B [Cologania lemmonii]
          Length = 470

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|90581151|ref|ZP_01236950.1| ATP synthase subunit B [Vibrio angustum S14]
 gi|90437672|gb|EAS62864.1| ATP synthase subunit B [Vibrio angustum S14]
          Length = 468

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 190/416 (45%), Gaps = 20/416 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  I      V      V        V   +N   + +V + +   +V    +G 
Sbjct: 1   MATGKIVQIIGAVVDVEFPQDSVPQVYDALHVDAKENGTLVLEVQQQLGGGVVRGIAMGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + GR   +       GR++N LG+PID    +G+ +    I  + P   
Sbjct: 61  SDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQE-RYAIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++  V +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 DQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDFYYEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERF 239

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G
Sbjct: 240 RDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D   
Sbjct: 298 SITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLV 357

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  L+ R++E +DI  I G     +    +AV +   I  FL Q 
Sbjct: 358 VGQEHYDIARGVQSLLQRYKELKDIIAILGMDELSEED-KQAVSRARKIERFLTQP 412


>gi|212896650|gb|ACJ38528.1| membrane-bound ATP synthase subunit B [Mucuna sp. Doyle et al.
           s.n.]
          Length = 470

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|113910950|gb|ABI48207.1| ATPase beta subunit [Phyllocladus aspleniifolius]
          Length = 456

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ +  GQ+I++  ++        V    +   + +  G  V   G    +       GR
Sbjct: 12  KDQNTTGQLIQVTCEVQQLLGNNKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGGATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDDLGPVDAS-ARSPIHRPAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         + S VGER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIREQNIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|332105873|gb|AEE01399.1| ATP synthase beta chain [Fremontodendron californicum]
          Length = 493

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|119475220|ref|ZP_01615573.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2143]
 gi|119451423|gb|EAW32656.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2143]
          Length = 465

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 184/413 (44%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +   + +  L    ++   +V    +G  E 
Sbjct: 1   MSSGQIVQIIGAVIDVEFPRDSVPQVYDALTVTEKALTLEVQQQLGDGVVRTIAMGSSEG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +S G +V   G    +       GR+++ LG PID    +G+ +    I  K P      
Sbjct: 61  VSRGLVVESTGAPISVPVGIETLGRIMDVLGNPIDECGPIGEKE-RASIHRKAPAYDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             E   +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 ASEDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIALEHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +T+AE F  +
Sbjct: 180 ERTREGNDFYYEMQESGVVNIEEPSKSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDE 239

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 240 GKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQERI--TSTKTGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D      
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLIIGT 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +  ++ R++E +DI  I G     +    + V++   I  FL Q 
Sbjct: 358 EHYDTARGVQSVLQRYKELKDIIAILGMDELSEED-KQTVNRARKIERFLSQP 409


>gi|21633349|gb|AAM52149.1| ATP synthase beta subunit [Hildebrandtia valo]
 gi|21633357|gb|AAM52153.1| ATP synthase beta subunit [Sabaudiella aloysii]
          Length = 487

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++++ +    +V ++  +  V    +   
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQMNVACEVQQLLGNNRVRAVAMSDT 77

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 78  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TKTTSPIHRSAPAFIQ 136

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 137 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 196

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 197 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 256

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 257 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 314

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 315 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 374

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|154246023|ref|YP_001416981.1| F0F1 ATP synthase subunit beta [Xanthobacter autotrophicus Py2]
 gi|226740692|sp|A7IH31|ATPB_XANP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154160108|gb|ABS67324.1| ATP synthase F1, beta subunit [Xanthobacter autotrophicus Py2]
          Length = 478

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 191/433 (44%), Gaps = 26/433 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +    + +  + +V   +    V    +   E + 
Sbjct: 6   GRITQVIGAVVDVQFDGHLPEILNALETTNQGNRLVLEVAQHLGESTVRCIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++   A   GR++N +G+P+D    + + + +  I    P    +   
Sbjct: 66  RGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPI-EAEATRGIHQPAPSYAEQATE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 AEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +  N+              K  +V    +E P  R    LT +T+AE+F
Sbjct: 185 TREGNDLYHEMIESNVNKDPHENGGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEHF 244

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG
Sbjct: 245 RDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKG 302

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+   A 
Sbjct: 303 SITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAI 362

Query: 366 SADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             DE       +   + R++  +DI  I G     +      V +   I  FL Q     
Sbjct: 363 LGDEHYNTARQVQQTLQRYKALQDIIAILGMDELSEED-KITVARARKIERFLSQP---F 418

Query: 425 SSEDVFQEITKKL 437
              +VF     KL
Sbjct: 419 HVAEVFTGSPGKL 431


>gi|224830482|gb|ACN66336.1| ATP synthase beta chain [Albertisia papuana]
 gi|224830524|gb|ACN66357.1| ATP synthase beta chain [Curarea toxicofera]
          Length = 488

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|186886305|gb|ACC93555.1| ATPase F1 alpha subunit [Juncus compressus]
          Length = 358

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 124 TAIAIDTILNQKEMNSQGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 183

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 184 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 243

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 244 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 303

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 304 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 355


>gi|34539327|gb|AAQ74547.1| F1-ATPase alpha subunit [Hydrothrix gardneri]
          Length = 390

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 87/398 (21%), Positives = 157/398 (39%), Gaps = 23/398 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++    G+ V      S   G  + +  + V I   G    I  GDLV 
Sbjct: 1   VGEGIARVYGLNEIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIARKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVG 196
           G++ +D   P+  GQR  +      GK+ +      +                 +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     N  + S++V  T+ +   L+ + P +   + EYF   G + L+I
Sbjct: 176 QKRSTVAQLVQILPEANALEYSILVATTASDPAPLQFLXPYSGCAMGEYFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER          G+ TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSSTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVR 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
            S    + ++ E   +     +   +D      +++  
Sbjct: 356 GSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGA 390


>gi|16762461|ref|NP_458078.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16767149|ref|NP_462764.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29143949|ref|NP_807291.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62182347|ref|YP_218764.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161505610|ref|YP_001572722.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|161616985|ref|YP_001590950.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168263239|ref|ZP_02685212.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464800|ref|ZP_02698692.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194444846|ref|YP_002043111.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450391|ref|YP_002047894.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471110|ref|ZP_03077094.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194734293|ref|YP_002116806.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251677|ref|YP_002148800.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197263502|ref|ZP_03163576.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198245365|ref|YP_002217811.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387213|ref|ZP_03213825.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204928445|ref|ZP_03219644.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|207859088|ref|YP_002245739.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213052670|ref|ZP_03345548.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213427470|ref|ZP_03360220.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586049|ref|ZP_03367875.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213857970|ref|ZP_03384941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224585660|ref|YP_002639459.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238913118|ref|ZP_04656955.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289826259|ref|ZP_06545371.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|75505463|sp|Q57HX9|ATPB_SALCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81832703|sp|Q7CPE2|ATPB_SALTY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81849133|sp|Q8XGX4|ATPB_SALTI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081341|sp|A9MJR9|ATPB_SALAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081342|sp|A9MXA6|ATPB_SALPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740666|sp|B5EYZ6|ATPB_SALA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740667|sp|B5FN33|ATPB_SALDC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740668|sp|B5QUS4|ATPB_SALEP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740670|sp|B4TAX2|ATPB_SALHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740671|sp|B4SYD1|ATPB_SALNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740673|sp|B4TN31|ATPB_SALSV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808162|sp|C0Q2N2|ATPB_SALPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|25290439|pir||AF0954 ATP synthase beta chain [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16422439|gb|AAL22723.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|16504766|emb|CAD03130.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139585|gb|AAO71151.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62129980|gb|AAX67683.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|160866957|gb|ABX23580.1| hypothetical protein SARI_03786 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161366349|gb|ABX70117.1| hypothetical protein SPAB_04806 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403509|gb|ACF63731.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408695|gb|ACF68914.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457474|gb|EDX46313.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194709795|gb|ACF89016.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632484|gb|EDX50968.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197215380|gb|ACH52777.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197241757|gb|EDY24377.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197939881|gb|ACH77214.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604311|gb|EDZ02856.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204321878|gb|EDZ07076.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205348072|gb|EDZ34703.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710891|emb|CAR35255.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224470188|gb|ACN48018.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261249005|emb|CBG26863.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996152|gb|ACY91037.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301160397|emb|CBW19923.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914996|dbj|BAJ38970.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320088290|emb|CBY98051.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321222161|gb|EFX47234.1| ATP synthase beta chain [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322617222|gb|EFY14127.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619090|gb|EFY15976.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625157|gb|EFY21985.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322630208|gb|EFY26979.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634367|gb|EFY31101.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635251|gb|EFY31966.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642872|gb|EFY39457.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645076|gb|EFY41606.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322650425|gb|EFY46837.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653617|gb|EFY49944.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661555|gb|EFY57778.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322661637|gb|EFY57856.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669799|gb|EFY65941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671992|gb|EFY68111.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322674997|gb|EFY71083.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683687|gb|EFY79700.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686074|gb|EFY82059.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716839|gb|EFZ08410.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323132227|gb|ADX19657.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323192009|gb|EFZ77246.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200503|gb|EFZ85581.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202732|gb|EFZ87769.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208309|gb|EFZ93250.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211744|gb|EFZ96577.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323218606|gb|EGA03313.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220007|gb|EGA04477.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224778|gb|EGA09043.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323232514|gb|EGA16616.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235289|gb|EGA19374.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323241077|gb|EGA25114.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323241374|gb|EGA25406.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323248604|gb|EGA32534.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252097|gb|EGA35957.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258599|gb|EGA42262.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262369|gb|EGA45927.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323268206|gb|EGA51682.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270620|gb|EGA54065.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326625597|gb|EGE31942.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332990714|gb|AEF09697.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 460

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|130076698|gb|ABO31969.1| ATPase alpha subunit [Myriophyllum sp. Qiu 95020]
          Length = 379

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 156/381 (40%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L + +  G+ V      S   G  + +  + V I   G    I  G LV
Sbjct: 3   SVGDGIARVYGL-KGIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGGLV 58

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 59  KRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 117

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 118 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAI 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 178 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 238 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++
Sbjct: 298 IETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQV 357

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             S    + ++ E       G
Sbjct: 358 CGSSKLELAQYREVAAFAQFG 378


>gi|14718199|gb|AAK72838.1| ATP synthase beta subunit [Quercus rubra]
          Length = 496

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      VT   + +       VV   K  D  GQ I +  ++        V   
Sbjct: 19  GRIAQIIGPVLDVTFPPRKMPNIYNALVV---KGRDTAGQQINVTCEVQQLLGNNRVRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 76  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 135 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 313 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 372

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 373 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|89074728|ref|ZP_01161186.1| ATP synthase subunit B [Photobacterium sp. SKA34]
 gi|89049492|gb|EAR55053.1| ATP synthase subunit B [Photobacterium sp. SKA34]
          Length = 468

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 190/416 (45%), Gaps = 20/416 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  I      V      V        V   +N   + +V + +   +V    +G 
Sbjct: 1   MATGKIVQIIGAVVDVEFPQDSVPQVYDALHVDVKENGTLVLEVQQQLGGGVVRGIAMGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + GR   +       GR++N LG+PID    +G+ +    I  + P   
Sbjct: 61  SDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQE-RYAIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++  V +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 DQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDFYYEMQEAGVVNIENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERF 239

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G
Sbjct: 240 RDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D   
Sbjct: 298 SITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLV 357

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  L+ R++E +DI  I G     +    +AV +   I  FL Q 
Sbjct: 358 VGQEHYDIARGVQSLLQRYKELKDIIAILGMDELSEED-KQAVSRARKIERFLTQP 412


>gi|255961390|ref|YP_003097583.1| ATP synthase CF1 subunit beta [Dendrocalamus latiflorus]
 gi|255040267|gb|ACT99927.1| ATP synthase CF1 subunit beta [Dendrocalamus latiflorus]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQ-----GKNSDNLGQVIRINLDI-VYICP 74
             G I  I      +T    +   + + +V Q     GK  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDITFPPGKLPYIYNALVVQSRDTAGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|212896656|gb|ACJ38531.1| membrane-bound ATP synthase subunit B [Hardenbergia violacea]
          Length = 470

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|183206598|gb|ACC54497.1| ATP synthase beta subunit [Merciera tenuifolia]
          Length = 488

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 11  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVALTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|65332616|gb|AAY42232.1| ATP synthase beta subunit [Anisophyllea sororia]
          Length = 479

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLATKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 416


>gi|6561701|gb|AAF17045.1|AF197713_1 ATPase alpha subunit [Asparagus officinalis]
          Length = 410

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/402 (22%), Positives = 164/402 (40%), Gaps = 23/402 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 2   RVYGLNE-IQAGEMVEFA---SGVKGLALNLENENVGIVIYGSDTTIKKGDLVKRTGSIV 57

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 58  DVPAGKAMLGRVVDTLGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 116

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++   V
Sbjct: 117 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERSTSESETLYCVYVAIGQKRSTV 176

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N  + S++V AT+ ++  ++ +AP +  T+ EYF   G + L+I D +++
Sbjct: 177 AQLVQILPEANALEYSIIVAATASDAAPMQFVAPYSGCTMGEYFRDNGMHALIIYDDLSK 236

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R++A      P    +P  +F    RLLER      +   G+ TA+  +     +
Sbjct: 237 QAVAYRQMALLLRRPPGREAFPGDIFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGD 296

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S    
Sbjct: 297 VSAYIPTNVIPITDGQICSETELFYRGIRPAINIGLSVSRVGSAAQLKAMKQVRGSSKLE 356

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 LAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 395


>gi|6689113|emb|CAB65396.1| ATP synthase beta subunit [Rogiera suffrutescens]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 434


>gi|66276279|gb|AAY44154.1| ATP synthase beta subunit [Gynostemma pentaphyllum]
          Length = 488

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTKAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|84385785|ref|ZP_00988815.1| ATP synthase subunit B [Vibrio splendidus 12B01]
 gi|86145156|ref|ZP_01063487.1| ATP synthase subunit B [Vibrio sp. MED222]
 gi|84379101|gb|EAP95954.1| ATP synthase subunit B [Vibrio splendidus 12B01]
 gi|85836733|gb|EAQ54853.1| ATP synthase subunit B [Vibrio sp. MED222]
          Length = 461

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 187/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           +  G I  +      V      S  V     V  +  +S  L    ++   IV    +G 
Sbjct: 1   MSVGKIVKVIGAVVDVEFSGGNSPRVYDALKVTSEEASSLVLEVQQQLGGSIVRCIAMGT 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G    +       GR++N LG+PID    +G+ + S EI  + P   
Sbjct: 61  SDGLRRGLTVENTGSPITVPVGEETLGRIMNVLGQPIDECGEIGQKE-SYEIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 EQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFT 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +   +G+IT++ +
Sbjct: 240 LLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTRQGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   + R++E +DI  I G          + V +   I  FL Q 
Sbjct: 358 IAQKVQTTLQRYKELKDIIAILGMDELSTED-KQTVSRARKIERFLTQP 405


>gi|6687660|emb|CAB65033.1| ATP synthase beta subunit [Guettarda uruguensis]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085190|gb|AAX62999.1| ATP synthase beta subunit [Prockia sp. Alford 85]
          Length = 486

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFLPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|325135527|gb|EGC58145.1| ATP synthase F1, beta subunit [Neisseria meningitidis M0579]
          Length = 465

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 180/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVNNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSCAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|269961119|ref|ZP_06175487.1| ATP synthase subunit A [Vibrio harveyi 1DA3]
 gi|269834070|gb|EEZ88161.1| ATP synthase subunit A [Vibrio harveyi 1DA3]
          Length = 512

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L  +   N          G I S++    T+  L+  V  G+ +      
Sbjct: 1   MQLNSNEISELIRERIVNFNLESEARNEGTIVSVSDGIITIHGLAD-VMQGEMLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRFALALNLERHSVGAVVMGPYADLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAVSF-DRMDPVEVIAPGVIDRKSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDC--FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKELGVKCIYVAIGQKASTIANVVRKLEEHGALENTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    + +     + + +KQ  
Sbjct: 413 LDEATRRQLDHGEKVTELMKQKQ 435


>gi|195183481|dbj|BAG66956.1| ATP synthase beta subunit [Corynostylis arborea]
          Length = 489

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFRPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTCTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61968253|gb|AAX57053.1| ATP synthase beta subunit [Keayodendron bridelioides]
          Length = 477

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTH-ATYPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRHVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPQIVGTEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|52082866|gb|AAU26014.1| ATPase beta subunit [Piper aduncum]
          Length = 470

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + ++ +G+  D +GQ I +  ++        V    
Sbjct: 1   GRVVQIIGPVLDVAFSPGKMPNIYNALIVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|5758880|gb|AAD50854.1| ATP synthase beta subunit [Eustrephus latifolius]
          Length = 495

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|13473456|ref|NP_105023.1| F0F1 ATP synthase subunit beta [Mesorhizobium loti MAFF303099]
 gi|81855462|sp|Q98EV8|ATPB_RHILO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|14024205|dbj|BAB50809.1| ATP synthase beta subunit [Mesorhizobium loti MAFF303099]
          Length = 477

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 105/411 (25%), Positives = 186/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G +  +      V        + + +      +  + +V   +  + V    +   E + 
Sbjct: 10  GKVRQVIGAVVDVQFGDHLPAILNALETTNVGNRLVLEVAQHLGENTVRCIAMDSTEGLV 69

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+IN +G+P+D +  +   ++   I    P  + +   
Sbjct: 70  RGQEVRDTGAPITVPVGPGMLGRIINVIGEPVDEEGPVDAIEMR-SIHQPAPTYVEQSTE 128

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 129 AQILITGIKVLDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGER 188

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   +++        G    K+ +V    +E P  R    LT +T+AEYF  +G 
Sbjct: 189 TREGNDLYHEFIESGVNKKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQ 248

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 249 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSV 306

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD    LNR++AE+G YP VDPL S SR+ D      + 
Sbjct: 307 QAIYVPADDLTDPAPATSFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPMVVGEEH 366

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +    + V +   I  FL Q 
Sbjct: 367 YAVARQVQSILQRYKSLQDIIAILGMDELSEED-KQTVARARKIERFLSQP 416


>gi|332105887|gb|AEE01406.1| ATP synthase beta chain [Grewia orientalis]
          Length = 476

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 3   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|323173357|gb|EFZ58986.1| ATP synthase F1, beta subunit [Escherichia coli LT-68]
 gi|332997375|gb|EGK16991.1| ATP synthase F1, beta subunit [Shigella flexneri K-218]
          Length = 466

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|298245829|ref|ZP_06969635.1| ATP synthase F1, alpha subunit [Ktedonobacter racemifer DSM 44963]
 gi|297553310|gb|EFH87175.1| ATP synthase F1, alpha subunit [Ktedonobacter racemifer DSM 44963]
          Length = 510

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 91/407 (22%), Positives = 159/407 (39%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G + ++      V  L Q V   + V          G    +  + V    +G   +
Sbjct: 27  ASVGTVIAVQDGIARVYGL-QDVKYLELVEFPRTG--LFGLAFNLEEETVSCPILGDYTQ 83

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I   D V   GR   +       GRV+N+LG+ ID    +   D +  +    P  + RQ
Sbjct: 84  IREDDEVRTTGRIIEVPVGDALLGRVVNSLGQAIDDRGPIV-TDKTRPVERVAPGVITRQ 142

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGE 197
            V    +TGI+ ID   P+  GQR  +      GK+ +      +        I   +G+
Sbjct: 143 TVNTPVQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKDLFCIYVAIGQ 202

Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   +               +V+V A + +   L+ +AP     I E F   G + L+I 
Sbjct: 203 KNSSIARTRAILEQHGAMEYTVIVAAGASDPAPLKYLAPYAGCAIGEEFMESGRDALIIY 262

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +T+ A + R ++      P    +P  VF    RLLER     ++   G++TA+  + 
Sbjct: 263 DDLTKHAEAYRNMSLIIRRPPGREAFPGDVFYLHSRLLERAARLNEDYGGGSLTALPIIE 322

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
              ++ +  I  +V SI DG I L   L   G+ P ++   SVSR+   A +    ++  
Sbjct: 323 TKANDISAYIPTNVISITDGQIFLETDLFNAGQRPALNVGLSVSRVGSSAQTKGMSQVAG 382

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +L   + +F   R +     +   +D      + +   + + LKQ  
Sbjct: 383 TLRLDLAQF---RSLAAFAQFASDLDKATKARIDRGRRLTEILKQPQ 426


>gi|183206664|gb|ACC54530.1| ATP synthase beta subunit [Campanula cretica]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      VT    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRVVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|57868950|gb|AAW57471.1| ATP synthase beta subunit [Rhododendron impeditum]
          Length = 493

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   S  +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 17  GRIVQIIGPVLDVAFPSGKMPNIYNALVVQG--RDTVGQPINVTCEVQQLVGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    L     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPLD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIELETKLLIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYKEMKETGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGDKHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 430


>gi|322379808|ref|ZP_08054105.1| flagellum-specific ATP synthase [Helicobacter suis HS5]
 gi|321147776|gb|EFX42379.1| flagellum-specific ATP synthase [Helicobacter suis HS5]
          Length = 436

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 156/438 (35%), Positives = 239/438 (54%), Gaps = 8/438 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQV 62
           +LE L    + + ++L  + G +  I      V+       LGD V V +    + LG V
Sbjct: 2   SLEILRAQLQ-HKRDLSPRYGVVVKILPNMVFVSGFLP--SLGDMVQVERADGGECLGMV 58

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + +        P    E   +GD V                GRV++ LG P+D    +  
Sbjct: 59  VVVEKTQFGFTPFSFVEGCKVGDRVLFVKEGLSFPVGQGLLGRVLDPLGNPLDKLGFVRA 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +  +M      ++R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 SGFA-PVMLAPIKPLDRAIIDEPFSVGVKSIDGLLTCGKGQKMGIFAGSGVGKSTLMGMV 177

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            R       +I+L+GERGRE+ EFI   L  NL+ +V++VATSD++P++RK     A+++
Sbjct: 178 VRGCSASIKVIALIGERGREIPEFIHKNLQGNLENTVLIVATSDDAPLMRKYGAFCAMSV 237

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF ++G +VL ++DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E
Sbjct: 238 AEYFKNQGHDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSALTLLPQLMERAGK-E 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           + KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR++
Sbjct: 297 QNKGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSRELTDHGIYPPINILHSASRVS 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  S D          L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q  
Sbjct: 357 KEVSSHDHMLAARKFRKLYALLKENEVLIRIGSYQRGFDPDLDEAMDKKAKMDAFLAQEE 416

Query: 422 SD-LSSEDVFQEITKKLQ 438
            + + S    QE+ + +Q
Sbjct: 417 EEVVPSSQSIQELQEIMQ 434


>gi|260779314|ref|ZP_05888206.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605478|gb|EEX31773.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 448

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 151/427 (35%), Positives = 233/427 (54%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  +    G +  +T +      +     L    + +    D +  QV+  +  I Y+ P
Sbjct: 23  SIPVARVTGRLVKVTGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVVGFDHTIAYLMP 80

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V    G   +  S  W GRV+N LG+ +D D  + +G   + +  K  
Sbjct: 81  IRRLGGLFAGAKVIPLDGDSTVQLSENWMGRVVNGLGEALD-DGPVLQGGDRVSLEPKPI 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  ++   D +++ 
Sbjct: 140 NPLKRRPVDSPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLMGMITQNTEADVIVVG 199

Query: 194 LVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFIE     +   K++++ A +DESP++R  A L    +AEYF  KG +V
Sbjct: 200 LIGERGREVREFIESNLTPEARDKAIIIAAPADESPLMRLRAMLLCHRVAEYFRDKGKDV 259

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P  RGYP SVF+ LP+LLER G SE   G++TA+ +
Sbjct: 260 LLMVDSLTRYAMAQREIALSLGEPPATRGYPPSVFNALPQLLERAGNSENPNGSLTAIYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +L  GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  ASVSR            L
Sbjct: 320 ILAAGDDQQDPVVDSARAILDGHVVLSRKLAEQGHYPAIDVNASVSRCMTACSQPAHLTL 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQ 431
            +        + + +D+  +GGY+PG D  LD++V   P +  +L+Q+    +       
Sbjct: 380 ANEFRKTYSNYLQVKDLLPLGGYQPGQDPELDRSVALYPQLTAYLQQAADCSVDFPQSLT 439

Query: 432 EITKKLQ 438
           E+ +  Q
Sbjct: 440 ELAQLFQ 446


>gi|156530117|gb|ABU75155.1| AtpB [Castela erecta]
          Length = 493

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 185/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ+I +  ++        V   
Sbjct: 16  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQLINVTCEVQQLLGNNRVRAV 72

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I  + 
Sbjct: 73  AMSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKRA 131

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 132 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 191

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 192 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 251

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 252 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 309

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 310 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 369

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 370 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 428

Query: 420 S 420
            
Sbjct: 429 P 429


>gi|157964051|ref|YP_001504085.1| F0F1 ATP synthase subunit beta [Shewanella pealeana ATCC 700345]
 gi|189081346|sp|A8HAG3|ATPB_SHEPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157849051|gb|ABV89550.1| ATP synthase F1, beta subunit [Shewanella pealeana ATCC 700345]
          Length = 458

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 187/410 (45%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G +  +      V      V      V+      + G V+     +   +V    +G
Sbjct: 1   MSTGTVVQVIGAVVDVEFPHDAVPQ----VYDALEIKSEGLVLEVQQQLGGGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +   +   GR++N LG+P+D    +G+ D    I  + P  
Sbjct: 57  SSDGLRRGLEVVNSGSPITVPVGSATLGRIMNVLGEPVDEAGPIGEED-RYVIHREAPSY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 116 EDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + + +  ++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 354 DVANGVQTVLQRYKELKDIIAILGMDELSDED-KTTVFRARKIEKYLSQP 402


>gi|113170421|ref|YP_717213.1| AtpB [Ostreococcus tauri]
 gi|118573712|sp|Q0P3P2|ATPB_OSTTA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112806828|emb|CAL36335.1| AtpB - contains Intron II [Ostreococcus tauri]
          Length = 483

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 191/420 (45%), Gaps = 26/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKN--SDNL---GQVIRINLDIV-YICPVG 76
           G I+ I   V   V   ++   + + VV +GKN   D +    +V ++  D V     + 
Sbjct: 11  GRITQIIGPVIDAVFSPNKMPNIYNSVVIEGKNDVGDTIKCVAEVQQLLGDNVVRAVSMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D   ++   +  + I    P  
Sbjct: 71  ATDGLMRGMTVVDTGAALSVPVGKNTLGRIFNVLGEPVDELGAVSTPEGMLPIHRAAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV----- 190
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     ++   K      
Sbjct: 131 VDLDTNLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIVNNNIAKAHGGVS 190

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFAGVGERTREGNDLYQEMCESKVIDTANLANSKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNNQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 309 TKTGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML 368

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D       +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 369 QPWILGDDHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQP 427


>gi|14717935|gb|AAK72710.1| ATP synthase beta subunit [Androstachys johnsonii]
          Length = 485

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 187/421 (44%), Gaps = 28/421 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           +G  +  I  V   V    +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 13  RGRIVQIIGPVLDVVFPRGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRTV 70

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 71  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSA 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +      K F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   +
Sbjct: 130 PAFIELDTKLKIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGV 189

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 190 SVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 249

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 250 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 308 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTM 367

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 368 LQPNIVGDDHYEIAQKVKQTLQRYKELQDIIAILGLDELSEED-RLNVARARKIERFLSQ 426

Query: 420 S 420
            
Sbjct: 427 P 427


>gi|89280642|ref|YP_514859.1| ATP synthase CF1 beta chain [Solanum lycopersicum]
 gi|118573750|sp|Q2MI93|ATPB_SOLLC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|84371990|gb|ABC56307.1| ATP synthase CF1 beta subunit [Solanum lycopersicum]
 gi|89241678|emb|CAJ32400.1| ATP synthase CF1 beta chain [Solanum lycopersicum]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATEGLTRGMAVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|315126016|ref|YP_004068019.1| FliI, flagellum-specific ATP synthase [Pseudoalteromonas sp.
           SM9913]
 gi|315014530|gb|ADT67868.1| Putative FliI, flagellum-specific ATP synthase [Pseudoalteromonas
           sp. SM9913]
          Length = 449

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 158/443 (35%), Positives = 242/443 (54%), Gaps = 25/443 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINL 67
           + L       LV   G ++ +  +  T T   Q+   G+    +  +      +V+  N 
Sbjct: 11  SALTALTPPELVKSYGRLTRVNGLTLTATG-GQFAM-GEKYQVESVDGHWYDAEVVGFNQ 68

Query: 68  DIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGK----- 121
           D  Y+ P+   + +  G  V        ++ S    GRVI+A  +PID    L +     
Sbjct: 69  DEAYLMPLKKIQNLYSGGRVRPVIKNSHVAISEKLLGRVIDAQMQPIDNLGPLEQDSTMS 128

Query: 122 -----GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
                 D S+         + R+ V +    GIR I+    +  GQR+G+FAGSG+GKS 
Sbjct: 129 ACKLGNDYSLT-------PLERKGVTEPLDVGIRAINSLFSVGKGQRLGLFAGSGVGKSK 181

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAP 235
           LL M  R    D VI+SLVGERG EV++FI +    + LKK++V+ + +D+SP+LR  A 
Sbjct: 182 LLGMMTRFTSADVVIVSLVGERGWEVKDFIEQSLGKEGLKKAIVIASPADDSPLLRIKAA 241

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             +  +A YF  K  NVLL++DS+TR+A + REI  + GELP ++GYP SVFS+L +L+E
Sbjct: 242 ELSHKLAAYFRDKNSNVLLLMDSLTRYAQAQREIGLSVGELPASKGYPPSVFSKLTQLVE 301

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
             G SEK KG++TA+ +VL +GD+  DPIAD+ R+ILDGHIVL+R+LAE+G YP ++  +
Sbjct: 302 SSGNSEKSKGSMTAIYTVLAEGDDQQDPIADNARAILDGHIVLDRTLAEKGHYPAINISS 361

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+     S ++      L  L  R+ +  ++  +G Y+ G D  LD AV+  P I  
Sbjct: 362 SISRVMPNIVSDEQLSFCYKLKKLYSRYMQVHELIPLGAYQAGKDPELDSAVNLYPKIES 421

Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438
           FL Q  ++   +  F +   +L 
Sbjct: 422 FLCQGLNE---QVDFSQSVNQLN 441


>gi|257852980|gb|ACV71501.1| ATP synthase beta subunit [Viola pubescens]
          Length = 482

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + V+ +G   D +G+ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNAVIVKG--RDTIGEQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMQVVDTGAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEANIGESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPKIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|224283629|ref|ZP_03646951.1| F0F1 ATP synthase subunit alpha [Bifidobacterium bifidum NCIMB
           41171]
 gi|310288110|ref|YP_003939369.1| ATP synthase alpha chain [Bifidobacterium bifidum S17]
 gi|313140780|ref|ZP_07802973.1| ATP synthase subunit alpha [Bifidobacterium bifidum NCIMB 41171]
 gi|309252047|gb|ADO53795.1| ATP synthase alpha chain [Bifidobacterium bifidum S17]
 gi|313133290|gb|EFR50907.1| ATP synthase subunit alpha [Bifidobacterium bifidum NCIMB 41171]
          Length = 559

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 94/439 (21%), Positives = 177/439 (40%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y  +     + GY+++       VT L       + +  +      LG   
Sbjct: 13  KALDDFVESYKPSDTPTQEVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GR ++ LG PIDG   +   
Sbjct: 69  NLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRTVDPLGNPIDGLGEIKGI 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 129 EGRRILEAQAPDVMHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 189 INQKKNWETGDPKKQVRCIYVAIGQKGSTIASVRQSLEEAGAMEYTTIVASPASDSAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 249 YIAPYTGSAIGQHWMYHGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L    + P
Sbjct: 309 RLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      +++
Sbjct: 369 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKNQLNR 425

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 426 GSHLTELLKQPQFSPYSME 444


>gi|114509220|gb|ABI75178.1| ATPase alpha subunit [Phyllospadix scouleri]
          Length = 384

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 94/392 (23%), Positives = 165/392 (42%), Gaps = 22/392 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNATAKENEKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYSIIVAATASDPAPLQFFAPYSGCALGEYFLDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLEL 355

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
            ++ E   +     +   +D      +++   
Sbjct: 356 AQYRE---VAAFAQFGSDLDAATQALLNRGAR 384


>gi|7708514|emb|CAB89945.1| ATP synthase beta subunit [Napoleona vogelii]
          Length = 481

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRILQIIGPVLNVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|20269410|gb|AAM17932.1| ATP synthase beta subunit [Eurya sp. Chung & Anderberg 1406]
          Length = 490

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|108773137|ref|YP_635646.1| ATP synthase CF1 beta subunit [Solanum tuberosum]
 gi|118573751|sp|Q2VEH0|ATPB_SOLTU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|82754634|gb|ABB90048.1| ATP synthase CF1 beta chain [Solanum tuberosum]
 gi|88656811|gb|ABD47064.1| ATP synthase CF1 beta subunit [Solanum tuberosum]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G   R+       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMAVIDTGAPIRVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|113910842|gb|ABI48153.1| ATPase beta subunit [Buxbaumia aphylla]
          Length = 465

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 182/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   ++   +   + + ++ +G+N+   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVISSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMRGMKVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVD-VSTTFPIHRPAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 412


>gi|110680693|ref|YP_683700.1| F0F1 ATP synthase subunit beta [Roseobacter denitrificans OCh 114]
 gi|118573740|sp|Q162S9|ATPB_ROSDO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|109456809|gb|ABG33014.1| ATP synthase F1, beta subunit [Roseobacter denitrificans OCh 114]
          Length = 474

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 187/422 (44%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V        + + +      +  + +V   +  + V    +  
Sbjct: 1   MANAVGKITQVIGAVVDVQFADHLPEILNALETNNNGNRLVLEVAQHLGENTVRAIAMDA 60

Query: 78  GEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V    G   I       GR++N +G+PID    +   D +  I  + P   
Sbjct: 61  TEGLVRGQTVTDTDGPISIPVGNATLGRIMNVVGEPIDEKGPV-ATDETRSIHQEAPAFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 EQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +  +          K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMIESSVIVPDNLTESKVALVYGQMNEPPGARMRVALTGLTLAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + 
Sbjct: 240 RDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKA 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D  
Sbjct: 298 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPQ 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 358 VLGEEHYNVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|37721017|gb|AAN32511.1| ATP synthase beta subunit [Lomandra longifolia]
          Length = 494

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPSIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|66276269|gb|AAY44149.1| ATP synthase beta subunit [Coriaria sarmentosa]
          Length = 488

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 11  SGRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAV 68

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 69  AMSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 127

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 128 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 187

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 188 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 247

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 248 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 305

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 306 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 366 LQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 424

Query: 420 S 420
            
Sbjct: 425 P 425


>gi|321260596|ref|XP_003195018.1| ATP synthase beta chain, mitochondrial precursor [Cryptococcus
           gattii WM276]
 gi|317461490|gb|ADV23231.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 547

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 119/454 (26%), Positives = 196/454 (43%), Gaps = 28/454 (6%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQ---------YVCLGDFVVHQGKN 55
               A  A  Y+    +Q G I ++      V   S           V  G+        
Sbjct: 53  PAKAANAARTYATPAGLQTGSIKTVIGAVVDVHFDSDNLPPILNALDVQFGEGQTAPEGG 112

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
              L     +  + V    +   + +  G  V   G   +I       GR++N +G+PID
Sbjct: 113 RLVLEVAQHLGENTVRCIAMDGTDGLVRGQKVVDTGAPIKIPVGPATLGRIMNVIGQPID 172

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               + KG     I +  P  +++    +  +TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 173 QRGPI-KGVKEAPIHADAPEFVDQSTQAEILETGIKVVDLLAPYARGGKIGLFGGAGVGK 231

Query: 175 STLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSD 225
           + L+     +        S+   VGER RE  +   +         +   K  +V    +
Sbjct: 232 TVLIQELINNIAKAHGGYSVFTGVGERTREGNDLYHEMRETGVINLEGDSKVALVFGQMN 291

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 292 EPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 351

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+RS+AE
Sbjct: 352 TLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAE 409

Query: 345 EGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPL S SR+ D         ++ +    ++  ++  +DI  I G     +   
Sbjct: 410 LGIYPAVDPLDSKSRMLDPRVVGQRHYEIATKTQQILQSYKSLQDIIAILGMDELSEED- 468

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              V +   I  F+ Q     +   VF  I  +L
Sbjct: 469 KLTVERARKIQRFMSQP---FAVAQVFTGIEGRL 499


>gi|288939810|ref|YP_003442050.1| ATP synthase F1 subunit beta [Allochromatium vinosum DSM 180]
 gi|288895182|gb|ADC61018.1| ATP synthase F1, beta subunit [Allochromatium vinosum DSM 180]
          Length = 460

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G +  I      V     +   + D +  +        Q  ++   +V    +G  +
Sbjct: 1   MSSGNVVEIIGAVVDVQFPRGEMPKVYDALKIESTGLTLEVQ-QQLGDGVVRTIAMGSTD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   ++       GR+++ LG PID    + K +    I  + P   ++
Sbjct: 60  GLQRGVDVTATGAPIQVPVGQATLGRIMDVLGNPIDEQGEV-KSEARWSIHRQAPKLEDQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P+  G ++G+F G+G+GK+  L    R+   +     + + V
Sbjct: 119 AASTEILETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLMELIRNIAVEHSGFSVFAGV 178

Query: 196 GERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +   G  L K  +V    +E P  R    LT +T+AEYF  +G +VL+
Sbjct: 179 GERTREGNDFYHEMKDGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLM 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++ SE+  L ERI  +    G+IT+  +V 
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTRTGSITSFQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR+ D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGTEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   + R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 357 RAVQGTLQRYKELKDIIAILGMDELSEED-KLTVNRARKIQRFLSQP 402


>gi|114448850|gb|ABI74948.1| ATP synthase alpha subunit [Chlorogalum pomeridianum]
 gi|114448852|gb|ABI74949.1| ATP synthase alpha subunit [Hesperocallis undulata]
          Length = 384

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 87/384 (22%), Positives = 155/384 (40%), Gaps = 22/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILPEAN 183

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 184 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 244 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 303

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 304 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VA 360

Query: 391 LIGGYRPGVDLILDKAVHQVPIIY 414
               +   +D       ++   + 
Sbjct: 361 AFAQFGSDLDAATQALPNRGARLT 384


>gi|30351871|emb|CAD48088.1| ATP synthase beta subunit [Rhadamanthus mascarenensis]
          Length = 486

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|210613760|ref|ZP_03289874.1| hypothetical protein CLONEX_02081 [Clostridium nexile DSM 1787]
 gi|210150969|gb|EEA81977.1| hypothetical protein CLONEX_02081 [Clostridium nexile DSM 1787]
          Length = 463

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ I      +         + + +    ++   L  V+     +  D+V    +G  
Sbjct: 7   GKITQIIGAVLDIKYADGHLPEINEAIEITRQDKSRL--VVEVAQHLGDDVVRCIAMGPT 64

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N LG+PID   +    +    I  K P    
Sbjct: 65  DGLVRGMEAVATGAAISVPVGENTLGRIFNVLGEPIDEKPAPTDVEYE-PIHRKAPSFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+   
Sbjct: 124 QATEAEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG  +V
Sbjct: 184 VGERTREGNDLYYEMQESGVINKTAMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD  +VL+R++ E G YP VDPL S SR+ D      +  K
Sbjct: 302 VYVPADDLTDPAPATTFAHLDAKVVLSRAITELGIYPAVDPLDSSSRMLDPNIVGEEHYK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  + G     +      V +   I  FL Q 
Sbjct: 362 VARGVQEVLQKYKELQDIIAMLGMDELSEED-KLTVSRARKIQRFLSQP 409


>gi|187777253|ref|ZP_02993726.1| hypothetical protein CLOSPO_00805 [Clostridium sporogenes ATCC
           15579]
 gi|187774181|gb|EDU37983.1| hypothetical protein CLOSPO_00805 [Clostridium sporogenes ATCC
           15579]
          Length = 462

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
           +     +   + +V   I  D V    +   E +  G  V   G    +       GR+ 
Sbjct: 31  LEINAGDKKVIAEVEQHIGDDTVRAIAMESTEGLRRGMEVLDTGSPVSVPVGKEVLGRLF 90

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID        + S  I    P    +    + F+TGI+VID+  P   G +IG+
Sbjct: 91  NVLGNPIDEVGEFTSNE-SYPIHRSAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGL 149

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+ L+     +   +     + + VGER RE  +   +     + +K+ +V  
Sbjct: 150 FGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEKTALVFG 209

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 210 QMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 269

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+RS+
Sbjct: 270 QPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRSI 327

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           AE G YP VDPL S SR+ D      +   +   + +++ R+ E +DI  I G     + 
Sbjct: 328 AELGIYPAVDPLESSSRMLDPRIIGEEHYDVAIKVKNILERYRELQDIIAILGIDELSEE 387

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 388 D-KLVVGRARRIQRFLSQP 405


>gi|147679147|ref|YP_001213362.1| F0F1 ATP synthase subunit beta [Pelotomaculum thermopropionicum SI]
 gi|190358698|sp|A5CYE2|ATPB_PELTS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146275244|dbj|BAF60993.1| F0F1-type ATP synthase, beta subunit [Pelotomaculum
           thermopropionicum SI]
          Length = 470

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 22/404 (5%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           +       D  G+ I + L++        V    +   + +  G      G         
Sbjct: 30  IKITSDKEDAFGRKIDLTLEVAQHLGNNTVRTVAMSSTDGLVRGMKAVDTGAPITCPVGR 89

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+++ LG+PIDG   +   D    I    PP + +    +  +TGI+VID+  P  
Sbjct: 90  PTLGRLVDVLGQPIDGKGPII-SDKRYPIHRPAPPLVEQSTKAEQLETGIKVIDLLVPFL 148

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-K 215
            G +IG+F G+G+GK+ ++     +         + + VGER RE  +   +     +  
Sbjct: 149 KGGKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYREMTEAGVLD 208

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSG 274
           K+ +V    +E P  R    LT + +AEYF  +   + LL +D+I RF  +  E++   G
Sbjct: 209 KTTMVFGQMNEPPGARLRVALTGLCLAEYFRDEEGADTLLFIDNIFRFTQAGSEVSALLG 268

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++ +E+ ++ ERI  +   KG++T+V +V V  D+  DP   +  + LDG
Sbjct: 269 RMPSAVGYQPTLATEMGQMQERI--TSTVKGSVTSVQAVYVPADDLTDPAPATTFAHLDG 326

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP VDPL S SR+ D      +  +    +  ++ R++E +DI  I 
Sbjct: 327 TVVLSRQIAELGIYPAVDPLDSTSRILDPLVVGNEHYQTARGVQKVLQRYKELQDIIAIL 386

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           G     D      V +   +  FL Q        + F  ++ K 
Sbjct: 387 GMEELSDDD-KLVVARARKLQRFLSQP---FHVAEAFTGMSGKF 426


>gi|22298068|ref|NP_681315.1| F0F1 ATP synthase subunit beta [Thermosynechococcus elongatus BP-1]
 gi|81844966|sp|Q8DLG8|ATPB_THEEB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|22294246|dbj|BAC08077.1| ATP synthase beta subunit [Thermosynechococcus elongatus BP-1]
          Length = 482

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 191/421 (45%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNL-----GQVIRINLDI-VYIC 73
              G+I+ +      +   S  +  + + +  QGKN+  L      +V ++  D  V   
Sbjct: 8   TNVGFITQVIGPVVDIEFPSGKMPAIYNALRIQGKNAAGLDVAVTCEVQQLLGDNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D   ++   + ++ I    
Sbjct: 68  AMSSTDGLVRGMEVVDTGAPISVPVGTATLGRIFNVLGEPVDEKGAVNATE-TLPIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P     +     F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +        
Sbjct: 127 PSFTQLETKPSVFETGIKVIDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGV 186

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+
Sbjct: 187 SVFAGVGERTREGNDLYNEMIESGVIDKDDPSKSKIALVYGQMNEPPGARMRVGLSGLTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+IT++ +V V  D+  DP   +  + LDG  VL+RSLA +G YP VDPL S S +
Sbjct: 305 STTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRSLAAKGIYPAVDPLGSTSNM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +   ++   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 365 LQPDIVGEEHYQTARAVQATLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|6689564|emb|CAB65488.1| ATP synthase beta subunit [Vahlia capensis]
          Length = 498

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQTINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|296274002|ref|YP_003656633.1| FliI/YscN family ATPase [Arcobacter nitrofigilis DSM 7299]
 gi|296098176|gb|ADG94126.1| ATPase, FliI/YscN family [Arcobacter nitrofigilis DSM 7299]
          Length = 435

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 168/425 (39%), Positives = 249/425 (58%), Gaps = 8/425 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPV 75
           NL++  G I+ I+S   T+  +   V +GD V  + ++     LG +  +  D   I P 
Sbjct: 15  NLIIPFGRITHISST--TIKAVGIEVAVGDIVKIESQHHLYTVLGMIASVESDGFKIVPF 72

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E   + D VF       +       GRV+NALG+PID    +   + +  I     P
Sbjct: 73  SFIEGFRINDKVFLQKDGLTVKSGYGLLGRVVNALGEPIDKKGKVKDLEQNSAINKLSIP 132

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
           A+ R  +++ F TG++ ID       GQ++G+FAGSG+GKSTL+ M  +       +++L
Sbjct: 133 ALERGIIDERFSTGVKAIDSMLTSGKGQKVGIFAGSGVGKSTLMGMIVKGCEAQIKVVAL 192

Query: 195 VGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           +GERGRE+ EFI   L +NL+ ++++ ATSDES ++RK    TA+ IAE+F  KG +VLL
Sbjct: 193 IGERGREIPEFIHYNLNNNLENTIIIAATSDESALMRKYGAFTAMAIAEFFRDKGHDVLL 252

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + REI  + GE PV+RGYP SVF+ LP+L+ER G +E   G+ITA  +VL
Sbjct: 253 MMDSVTRFAMAQREIGLSIGEPPVSRGYPPSVFALLPQLMERAGNTEL--GSITAFFTVL 310

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           VDGD+ NDPIAD  RSILDGHIVL R L E+G+YPP+D L S SR+ DK  S +      
Sbjct: 311 VDGDDMNDPIADQSRSILDGHIVLTRELTEQGQYPPIDLLRSASRVMDKVVSPEHYNGFL 370

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEI 433
            L  ++   +E   +  +G Y+ G+D  LD A+ +   I  FL Q  S+    + +F + 
Sbjct: 371 KLKRVLSLIKENEILIRVGAYKQGMDKELDDALAKREKIKTFLFQGTSEKYDFNQIFNQF 430

Query: 434 TKKLQ 438
            + ++
Sbjct: 431 MEVIK 435


>gi|218676677|ref|YP_002395496.1| F0F1 ATP synthase subunit beta [Vibrio splendidus LGP32]
 gi|218324945|emb|CAV26767.1| ATP synthase subunit B [Vibrio splendidus LGP32]
          Length = 461

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 187/411 (45%), Gaps = 17/411 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQ-YVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICPV 75
           +  G I  +      V         + D +      + +L  V+ +       IV    +
Sbjct: 1   MSVGKIVKVIGAVVDVEFSGGNSPRVYDALKVTSDEASSL--VLEVQQQLGSSIVRCIAM 58

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID    +G+ + S EI  + P 
Sbjct: 59  GTSDGLRRGLTVENTGSPITVPVGEETLGRIMNVLGQPIDECGEIGQKE-SYEIHREAPS 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         +
Sbjct: 118 YEEQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSV 177

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 178 FTGVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGR 237

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +   +G+IT++
Sbjct: 238 DVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTRQGSITSI 295

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      + 
Sbjct: 296 QAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEH 355

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E +DI  I G          + V +   I  FL Q 
Sbjct: 356 YDIAQKVQTTLQRYKELKDIIAILGMDELSTED-KQTVSRARKIERFLTQP 405


>gi|16943664|emb|CAD10758.1| ATP synthase, beta subunit [Calibanus hookerii]
          Length = 493

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|270158437|ref|ZP_06187094.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968]
 gi|289166724|ref|YP_003456862.1| H+-transporting ATP synthase beta chain [Legionella longbeachae
           NSW150]
 gi|269990462|gb|EEZ96716.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968]
 gi|288859897|emb|CBJ13883.1| putative H+-transporting ATP synthase beta chain [Legionella
           longbeachae NSW150]
          Length = 458

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 14/405 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G +  I      V      V  + D +  +  + D + +V + +   +V    +G  E +
Sbjct: 4   GTVVEIIGAVVDVEFPRDNVPKINDAL--KLVDGDLVFEVQQQLGDGVVRTIAMGTTEGL 61

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G    + G   ++       GR+++ LG+P+D    +G  +    I  K P   ++  
Sbjct: 62  KRGLKAENTGDPIQVPVGKKTLGRIMDVLGRPVDEAGPIGAEE-HWSIHRKPPTYEDQAG 120

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGE
Sbjct: 121 SQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 180

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL +
Sbjct: 181 RTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFV 240

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V 
Sbjct: 241 DNIYRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVP 298

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSS 375
            D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D      +       
Sbjct: 299 ADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARR 358

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 359 VQQTLQRYKELKDIIAILGMDELSEED-KRVVTRARKIQRFLSQP 402


>gi|186886255|gb|ACC93530.1| ATPase F1 alpha subunit [Juncus prominens]
          Length = 355

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 4   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGAPID 63

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 64  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 122

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 123 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 182

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 183 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 242

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      + G  ++TA+  +     + +  I  +V SI DG I L   
Sbjct: 243 GDVFYLHSRLLERAAKRSDQTGAXSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 302

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 303 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 354


>gi|42559034|gb|AAS20203.1| ATP synthase beta subunit [Agapanthus africanus]
          Length = 490

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|57868920|gb|AAW57456.1| ATP synthase beta subunit [Hydrangea sp. JS-2005]
          Length = 492

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|293605024|ref|ZP_06687418.1| flagellum-specific ATP synthase FliI [Achromobacter piechaudii ATCC
           43553]
 gi|292816573|gb|EFF75660.1| flagellum-specific ATP synthase FliI [Achromobacter piechaudii ATCC
           43553]
          Length = 499

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 154/456 (33%), Positives = 235/456 (51%), Gaps = 33/456 (7%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S +  +  G I+  T +    T L   V     + + +G +     +V+  +   +
Sbjct: 38  IRAASTDPWLVSGKITRATGLVLHATGLRLPVGAAARIEIARGHDHWADAEVVGFDGHTL 97

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 98  YLMPQADISGLPPGARVVPGEPPVQRAIPLPRKAELNGNAKPQLGRHLPVGNALLGRVLD 157

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG   L   +L+  + ++    ++R  ++    TG+R I+    +  GQR+G+F
Sbjct: 158 GAGRPLDGLGPLTGAELA-PLSAQPINPLSRAPIDTVLDTGVRAINGLLTVGRGQRMGLF 216

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D 
Sbjct: 217 AGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADV 276

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S +LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SV
Sbjct: 277 SALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSV 336

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G        + G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R L
Sbjct: 337 FAKLPMLVERAGMGAPGPSGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHL 396

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      +  +  +V      + R++  RD+  +G Y  G D  
Sbjct: 397 AEAGHYPAIDIEASISRAMTSLITPQQFAIVRRFKQNLSRYQRNRDLIAVGAYAAGNDPQ 456

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           LD+A+ + P +  FL+Q   +    D   E   +L+
Sbjct: 457 LDEAIARYPRLEAFLQQDIGENIGYD---EAVNQLR 489


>gi|7708272|emb|CAB90057.1| ATP synthase beta subunit [Dichapetalum brownii]
          Length = 478

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      +     +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 8   SGRIAQIIGPVLDIAFPPGKMPNIYNALVVKG--RDAFGQQINVTCEVQQLLGNNRVRAV 65

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    
Sbjct: 66  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSA 124

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 125 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 184

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 185 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 244

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 245 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 302

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 303 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 362

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 363 LQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 421

Query: 420 S 420
            
Sbjct: 422 P 422


>gi|44969408|gb|AAS49605.1| mitochondrial ATP synthase alpha subunit [Danio rerio]
          Length = 364

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 160/365 (43%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR- 94
           V  L + V   + V     +S   G  + +  D V +   G  + I  GD+V   G    
Sbjct: 1   VYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVD 56

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +       GRV++ALG PIDG   LG  +    +  K P  + R  V +  +TGI+ +D 
Sbjct: 57  VPVGEELLGRVVDALGNPIDGKGPLGSKE-RRRVGLKAPGIIPRISVREPMQTGIKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +      +                I   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFNEGTEEKKKLYCIYVAIGQKRSTVAQ 175

Query: 205 FIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G + L+I D +++ A
Sbjct: 176 LVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    YP  VF    RLLER          G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDNFGGGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L  +G  P ++   SVSR+   A +   K++  ++   + 
Sbjct: 296 AYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|51891229|ref|YP_073920.1| F0F1 ATP synthase subunit beta [Symbiobacterium thermophilum IAM
           14863]
 gi|81826265|sp|Q67TB7|ATPB_SYMTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|51854918|dbj|BAD39076.1| ATP synthase beta subunit [Symbiobacterium thermophilum IAM 14863]
          Length = 472

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 186/417 (44%), Gaps = 17/417 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN------LDIVYI 72
           +    G I +I      V     ++   +  +      +     + +        + V  
Sbjct: 1   MSEPTGKILAIMGAVVDVEFPDGHLPKLNHALVIRNGGERGDINLTLEVAQHLGNNQVRC 60

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G+ V+       +       GR+ N LG+ IDG   +    +S+ I  +
Sbjct: 61  IAMDSTDGLRRGETVYDTQAPITVPVGEPVLGRIFNVLGETIDGKGPVN-SPVSLPIHRE 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FD 188
            P   N     +   TGI+VID+  P   G +IG+F G+G+GK+ ++     +       
Sbjct: 120 PPGVANVDPATEMLPTGIKVIDLLCPYARGGKIGLFGGAGVGKTVMIQELIHNIAYKFGG 179

Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             I + VGER RE  +   + +    + K  +V    +E P  R    LT +T+AEYF  
Sbjct: 180 YSIFAGVGERTREGNDLYHEMIEAGVIDKVAMVFGQMNEPPGARMRVALTGLTMAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+
Sbjct: 240 EQGLDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGYLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R++ E+  +P VDPL S SR+ D    
Sbjct: 298 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAVFEKAIFPAVDPLDSTSRILDPNIV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q   
Sbjct: 358 GREHYEVARGVQKVLQRYKELQDIIAILGMDELSDED-KLIVARARKIERFLSQPMF 413


>gi|228016557|gb|ACP51387.1| ATP synthase CF1 alpha subunit [Abies firma]
          Length = 507

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 95/424 (22%), Positives = 171/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ +         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELLEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  ++  S  + GRV+NAL             +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVKATGKIAQVPVSDAYLGRVVNALAXXXXXXXXXXXSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA- 182
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIP 185

Query: 183 -RSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            +       +   +G++   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQKASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|126134912|ref|XP_001383980.1| F1F0-ATPase complex, F1 beta subunit [Scheffersomyces stipitis CBS
           6054]
 gi|126091178|gb|ABN65951.1| F1F0-ATPase complex, F1 beta subunit [Scheffersomyces stipitis CBS
           6054]
          Length = 503

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/430 (26%), Positives = 190/430 (44%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
             G + ++      V     S    L    +  G N   L     +  + V    +   E
Sbjct: 34  AAGKVRAVIGAVVDVQFEEGSLPAILNALTLKNGDNDLVLEVAQHLGENTVRAIAMDGTE 93

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+IN +G+PID    + +      I ++ P  + +
Sbjct: 94  GLVRGAPVTDTGAPISVPVGRGTLGRIINVVGEPIDERGPI-ECKQRNPIHAEPPSFVEQ 152

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   V
Sbjct: 153 STAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGV 212

Query: 196 GERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           GER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  + 
Sbjct: 213 GERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEE 272

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T
Sbjct: 273 GQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVT 330

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-A 367
           +V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    
Sbjct: 331 SVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGK 390

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +   + +++   +  ++  +DI  I G     +      V +   I  FL Q     +  
Sbjct: 391 EHYDVATNVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP---FAVA 446

Query: 428 DVFQEITKKL 437
           +VF  I  +L
Sbjct: 447 EVFTGIPGRL 456


>gi|18077609|emb|CAD11927.1| ATP synthase beta subunit [Platyspermation crassifolium]
          Length = 490

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|330721486|gb|EGG99532.1| ATP synthase beta chain [gamma proteobacterium IMCC2047]
          Length = 464

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 187/414 (45%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      +  + D +    K+     Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSLPKVYDALKVTEKDLTLEVQ-QQLGDGVVRAIAMGSSE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S G  V + G    +       GR+++ LG PID    +G+ +  M I  K P     
Sbjct: 60  GVSRGLEVANTGAPVSVPVGEETLGRIMDVLGNPIDECGEIGEQE-RMPIHRKAPTYEEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              E+  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 AASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYHEMQEAGVVNVENFKESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 239 DGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     
Sbjct: 297 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASKGIYPAVDPLDSTSRQLDPLIIG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 TEHYEVARGVQGVLQRYKELKDIIAILGMDELSEED-KNTVARARKIERFLSQP 409


>gi|326200288|gb|ADZ52327.1| ATP synthase CF1 beta subunit [Asclepias syriaca]
          Length = 495

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V         + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFGPGNMPNIYNALVVKG--RDTLGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|212896628|gb|ACJ38517.1| membrane-bound ATP synthase subunit B [Erythrina sousae]
          Length = 470

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINKKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 417


>gi|113910840|gb|ABI48152.1| ATPase beta subunit [Archidium alternifolium]
          Length = 472

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  K    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYKTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|3273598|gb|AAC24781.1| F1-ATPase alpha subunit [Veratrum viride]
          Length = 421

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 92/409 (22%), Positives = 165/409 (40%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G            GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KXTGSIVDVXAGKTMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSXVPIGRGQRELIIGDRQTGKTAIAXDTILNQKQMNSRGTKESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYFS  G + L+
Sbjct: 177 GQKRSTVAQLVQIITEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFSDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGRGLFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPI 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|5758854|gb|AAD50828.1| ATP synthase beta subunit [Aloe vera]
          Length = 496

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVIXEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|153833317|ref|ZP_01985984.1| ATP synthase F1, alpha subunit [Vibrio harveyi HY01]
 gi|148870453|gb|EDL69374.1| ATP synthase F1, alpha subunit [Vibrio harveyi HY01]
          Length = 512

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 185/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L  +   N          G I S++    T+  L+  V  G+ +      
Sbjct: 1   MQLNSNEISELIRERIVNFNLESEARNEGTIISVSDGIITIHGLAD-VMQGEMLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRFALALNLERHSVGAVVMGPYADLSEGMKVKGTGRILEVPVGNGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAVSF-DRMDPVEVIAPGVIDRKSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDC--FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKELGVKCIYVAIGQKASTIANVVRKLEEHGALENTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +E              G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    + +     + + +KQ  
Sbjct: 413 LDEATRRQLDHGEKVTELMKQKQ 435


>gi|218767495|ref|YP_002342007.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis Z2491]
 gi|81857515|sp|Q9JW70|ATPB_NEIMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|121051503|emb|CAM07796.1| ATP synthase beta chain [Neisseria meningitidis Z2491]
          Length = 465

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 179/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   D S  I    P     
Sbjct: 60  GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKSRAIHQAAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGCLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|322378954|ref|ZP_08053368.1| flagellum-specific ATP synthase [Helicobacter suis HS1]
 gi|321148630|gb|EFX43116.1| flagellum-specific ATP synthase [Helicobacter suis HS1]
          Length = 434

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 156/438 (35%), Positives = 239/438 (54%), Gaps = 8/438 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQV 62
           +LE L    + + ++L  + G +  I      V+       LGD V V +    + LG V
Sbjct: 2   SLEILRAQLQ-HKRDLSPRYGVVVKILPNMVFVSGFLP--SLGDMVQVERADGGECLGMV 58

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + +        P    E   +GD V                GRV++ LG P+D    +  
Sbjct: 59  VVVEKTQFGFTPFSFVEGCKVGDRVLFVKEGLSFPVGQGLLGRVLDPLGNPLDKLGFVRA 118

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              +  +M      ++R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 119 SGFA-PVMLAPIKPLDRAIIDEPFSVGVKSIDGLLTCGKGQKMGIFAGSGVGKSTLMGMV 177

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            R       +I+L+GERGRE+ EFI   L  NL+ +V++VATSD++P++RK     A+++
Sbjct: 178 VRGCSASIKVIALIGERGREIPEFIHKNLQGNLENTVLIVATSDDAPLMRKYGAFCAMSV 237

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF ++G +VL ++DS+TRFA + REI    GE P ++GYP S  + LP+L+ER G  E
Sbjct: 238 AEYFKNQGHDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSALTLLPQLMERAGK-E 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           + KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR++
Sbjct: 297 QNKGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSRELTDHGIYPPINILHSASRVS 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  S D          L    +E   +  IG Y+ G D  LD+A+ +   +  FL Q  
Sbjct: 357 KEVSSHDHMLAARKFRKLYALLKENEVLIRIGSYQRGFDPDLDEAMDKKAKMDAFLAQEE 416

Query: 422 SD-LSSEDVFQEITKKLQ 438
            + + S    QE+ + +Q
Sbjct: 417 EEVVPSSQSIQELQEIMQ 434


>gi|130076706|gb|ABO31973.1| ATPase alpha subunit [Rhodoleia championii]
          Length = 377

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 157/381 (41%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
             S    + ++ E       G
Sbjct: 356 RGSSKLELAQYREVAAFAQFG 376


>gi|6017818|gb|AAF01643.1| ATP synthase beta subunit [Paeonia suffruticosa]
          Length = 489

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G+  D++GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DSIGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|157488193|gb|ABV57773.1| ATP synthase CF1 beta subunit [Isotoma fluviatilis subsp.
           fluviatilis]
          Length = 498

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + +V +G   D LGQ I +  ++        V   
Sbjct: 20  SGRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +   ++   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGDEHYETAQNVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|190893716|ref|YP_001980258.1| H(+)-transporting ATP synthase, beta subunit [Rhizobium etli CIAT
           652]
 gi|226740664|sp|B3PQ68|ATPB_RHIE6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190698995|gb|ACE93080.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium
           etli CIAT 652]
          Length = 475

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 184/414 (44%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G ++ +      V    +   + + +      +  + +V   +  + V    +   E
Sbjct: 7   RSVGKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSE 66

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR++N +G+P+D    L        I    P  + +
Sbjct: 67  GLVRGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTA-HKRAIHQDAPAYVEQ 125

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 126 STEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 185

Query: 196 GERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +   + +        G    K+ +V    +E P  R    LT +T+AE+F  
Sbjct: 186 GERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRD 245

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +     +I
Sbjct: 246 QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTTTG--SI 303

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D     
Sbjct: 304 TSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVG 363

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 364 EEHYEVARKVQSTLQRYKALQDIIAILGMDELSEED-KLAVARARKIERFLSQP 416


>gi|239828585|ref|YP_002951209.1| F0F1 ATP synthase subunit beta [Geobacillus sp. WCH70]
 gi|259585446|sp|C5D990|ATPB_GEOSW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|239808878|gb|ACS25943.1| ATP synthase F1, beta subunit [Geobacillus sp. WCH70]
          Length = 473

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID    + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDMQGEIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 DDARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G+IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPLA
Sbjct: 291 RI--TSTATGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R+ E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLQRYRELQDIIAILGMDELSDED-KLIVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|21633361|gb|AAM52155.1| ATP synthase beta subunit [Seddera hirsuta]
          Length = 485

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++++ +    +V ++  +  V    +   
Sbjct: 16  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQMNVACEVQQLLGNNRVRAVAMSDT 75

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 76  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TKTTSPIHRSAPAFIQ 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 135 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 194

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 195 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 254

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 255 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 312

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 313 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 372

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|15425574|emb|CAC60330.1| ATP synthase beta subunit [Echinops bannaticus]
          Length = 494

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V + G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 75  MSATDGLTRGMDVMNTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDAS-TTFPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYDIAQEVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|15804332|ref|NP_290371.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 EDL933]
 gi|15833928|ref|NP_312701.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           Sakai]
 gi|16131600|ref|NP_418188.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. MG1655]
 gi|24115035|ref|NP_709545.1| F0F1 ATP synthase subunit beta [Shigella flexneri 2a str. 301]
 gi|26250476|ref|NP_756516.1| F0F1 ATP synthase subunit beta [Escherichia coli CFT073]
 gi|30064963|ref|NP_839134.1| F0F1 ATP synthase subunit beta [Shigella flexneri 2a str. 2457T]
 gi|74314242|ref|YP_312661.1| F0F1 ATP synthase subunit beta [Shigella sonnei Ss046]
 gi|82546107|ref|YP_410054.1| F0F1 ATP synthase subunit beta [Shigella boydii Sb227]
 gi|89110275|ref|AP_004055.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. W3110]
 gi|91213257|ref|YP_543243.1| F0F1 ATP synthase subunit beta [Escherichia coli UTI89]
 gi|110644073|ref|YP_671803.1| F0F1 ATP synthase subunit beta [Escherichia coli 536]
 gi|110807556|ref|YP_691076.1| F0F1 ATP synthase subunit beta [Shigella flexneri 5 str. 8401]
 gi|117626005|ref|YP_859328.1| F0F1 ATP synthase subunit beta [Escherichia coli APEC O1]
 gi|157156404|ref|YP_001465223.1| F0F1 ATP synthase subunit beta [Escherichia coli E24377A]
 gi|168748538|ref|ZP_02773560.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753634|ref|ZP_02778641.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759932|ref|ZP_02784939.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766232|ref|ZP_02791239.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772219|ref|ZP_02797226.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|168779967|ref|ZP_02804974.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786575|ref|ZP_02811582.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869]
 gi|168798780|ref|ZP_02823787.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508]
 gi|170022231|ref|YP_001727185.1| F0F1 ATP synthase subunit beta [Escherichia coli ATCC 8739]
 gi|170083233|ref|YP_001732553.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170681189|ref|YP_001746062.1| F0F1 ATP synthase subunit beta [Escherichia coli SMS-3-5]
 gi|170766683|ref|ZP_02901136.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627]
 gi|187732921|ref|YP_001882431.1| F0F1 ATP synthase subunit beta [Shigella boydii CDC 3083-94]
 gi|188493678|ref|ZP_03000948.1| ATP synthase F1, beta subunit [Escherichia coli 53638]
 gi|191165806|ref|ZP_03027644.1| ATP synthase F1, beta subunit [Escherichia coli B7A]
 gi|191170404|ref|ZP_03031957.1| ATP synthase F1, beta subunit [Escherichia coli F11]
 gi|193063774|ref|ZP_03044861.1| ATP synthase F1, beta subunit [Escherichia coli E22]
 gi|193069207|ref|ZP_03050164.1| ATP synthase F1, beta subunit [Escherichia coli E110019]
 gi|194428061|ref|ZP_03060605.1| ATP synthase F1, beta subunit [Escherichia coli B171]
 gi|194431044|ref|ZP_03063337.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012]
 gi|194435783|ref|ZP_03067886.1| ATP synthase F1, beta subunit [Escherichia coli 101-1]
 gi|195936359|ref|ZP_03081741.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807011|ref|ZP_03249348.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812092|ref|ZP_03253421.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818898|ref|ZP_03259218.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400614|ref|YP_002273260.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209921213|ref|YP_002295297.1| F0F1 ATP synthase subunit beta [Escherichia coli SE11]
 gi|215489070|ref|YP_002331501.1| F0F1 ATP synthase subunit beta [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217324652|ref|ZP_03440736.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218551266|ref|YP_002385058.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ATCC 35469]
 gi|218556303|ref|YP_002389217.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI1]
 gi|218560807|ref|YP_002393720.1| F0F1 ATP synthase subunit beta [Escherichia coli S88]
 gi|218692020|ref|YP_002400232.1| F0F1 ATP synthase subunit beta [Escherichia coli ED1a]
 gi|218697458|ref|YP_002405125.1| F0F1 ATP synthase subunit beta [Escherichia coli 55989]
 gi|218702582|ref|YP_002410211.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI39]
 gi|218707378|ref|YP_002414897.1| F0F1 ATP synthase subunit beta [Escherichia coli UMN026]
 gi|227883954|ref|ZP_04001759.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|237703533|ref|ZP_04534014.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           3_2_53FAA]
 gi|238902823|ref|YP_002928619.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli BW2952]
 gi|253775633|ref|YP_003038464.1| F0F1 ATP synthase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038951|ref|ZP_04873003.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           1_1_43]
 gi|254163684|ref|YP_003046792.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606]
 gi|254795738|ref|YP_003080575.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021246|ref|ZP_05435111.1| F0F1 ATP synthase subunit beta [Shigella sp. D9]
 gi|256025537|ref|ZP_05439402.1| F0F1 ATP synthase subunit beta [Escherichia sp. 4_1_40B]
 gi|260846483|ref|YP_003224261.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O103:H2 str. 12009]
 gi|260857853|ref|YP_003231744.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O26:H11 str. 11368]
 gi|260870466|ref|YP_003236868.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O111:H- str. 11128]
 gi|261225889|ref|ZP_05940170.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261258934|ref|ZP_05951467.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291285156|ref|YP_003501974.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615]
 gi|293407369|ref|ZP_06651291.1| ATP synthase subunit beta [Escherichia coli FVEC1412]
 gi|293413182|ref|ZP_06655848.1| ATP synthase F1 [Escherichia coli B354]
 gi|293417205|ref|ZP_06659832.1| ATP synthase F1 [Escherichia coli B185]
 gi|293464058|ref|ZP_06664472.1| ATP synthase F1 [Escherichia coli B088]
 gi|298383111|ref|ZP_06992706.1| ATP synthase subunit beta [Escherichia coli FVEC1302]
 gi|300815013|ref|ZP_07095238.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1]
 gi|300824558|ref|ZP_07104668.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7]
 gi|300896061|ref|ZP_07114620.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1]
 gi|300902986|ref|ZP_07120929.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1]
 gi|300925562|ref|ZP_07141435.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1]
 gi|300940918|ref|ZP_07155444.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1]
 gi|300950648|ref|ZP_07164543.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1]
 gi|300958740|ref|ZP_07170857.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1]
 gi|300983828|ref|ZP_07176770.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1]
 gi|300984354|ref|ZP_07176960.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1]
 gi|301020868|ref|ZP_07184927.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1]
 gi|301047555|ref|ZP_07194627.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1]
 gi|301305619|ref|ZP_07211709.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1]
 gi|301324967|ref|ZP_07218522.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1]
 gi|301644408|ref|ZP_07244407.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1]
 gi|306815916|ref|ZP_07450054.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101]
 gi|307140432|ref|ZP_07499788.1| F0F1 ATP synthase subunit beta [Escherichia coli H736]
 gi|307313196|ref|ZP_07592821.1| ATP synthase F1, beta subunit [Escherichia coli W]
 gi|309795711|ref|ZP_07690126.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7]
 gi|331644459|ref|ZP_08345588.1| ATP synthase F1, beta subunit [Escherichia coli H736]
 gi|331649558|ref|ZP_08350644.1| ATP synthase F1, beta subunit [Escherichia coli M605]
 gi|331655394|ref|ZP_08356393.1| ATP synthase F1, beta subunit [Escherichia coli M718]
 gi|331660076|ref|ZP_08361014.1| ATP synthase F1, beta subunit [Escherichia coli TA206]
 gi|331665386|ref|ZP_08366287.1| ATP synthase F1, beta subunit [Escherichia coli TA143]
 gi|331670582|ref|ZP_08371421.1| ATP synthase F1, beta subunit [Escherichia coli TA271]
 gi|331675219|ref|ZP_08375972.1| ATP synthase F1, beta subunit [Escherichia coli TA280]
 gi|331679836|ref|ZP_08380506.1| ATP synthase F1, beta subunit [Escherichia coli H591]
 gi|331685459|ref|ZP_08386045.1| ATP synthase F1, beta subunit [Escherichia coli H299]
 gi|332282473|ref|ZP_08394886.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp.
           D9]
 gi|81175145|sp|P0ABB6|ATPB_ECO57 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81175146|sp|P0ABB5|ATPB_ECOL6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81175147|sp|P0ABB4|ATPB_ECOLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81175148|sp|P0ABB7|ATPB_SHIFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573529|sp|Q0TAX7|ATPB_ECOL5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573530|sp|Q1R4K2|ATPB_ECOUT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573744|sp|Q31UN2|ATPB_SHIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573746|sp|Q3YVN6|ATPB_SHISS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123146532|sp|Q0SYU4|ATPB_SHIF8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201701|sp|A1AHR4|ATPB_ECOK1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990367|sp|A7ZTU4|ATPB_ECO24 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081332|sp|B1IX06|ATPB_ECOLC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740192|sp|B7MGF2|ATPB_ECO45 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740193|sp|B5YXD6|ATPB_ECO5E RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740194|sp|B7NR34|ATPB_ECO7I RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740195|sp|B7M588|ATPB_ECO8A RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740196|sp|B1X9W0|ATPB_ECODH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740197|sp|B7NF48|ATPB_ECOLU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740198|sp|B6I3W9|ATPB_ECOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740199|sp|B1LL59|ATPB_ECOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740201|sp|B7LK77|ATPB_ESCF3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740676|sp|B2TUP3|ATPB_SHIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808149|sp|B7UMJ7|ATPB_ECO27 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808150|sp|B7L882|ATPB_ECO55 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808151|sp|B7N2H1|ATPB_ECO81 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585443|sp|C4ZZ10|ATPB_ECOBW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12518589|gb|AAG58935.1|AE005605_3 membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
           coli O157:H7 str. EDL933]
 gi|26110906|gb|AAN83090.1|AE016769_205 ATP synthase beta chain [Escherichia coli CFT073]
 gi|41038|emb|CAA23527.1| unnamed protein product [Escherichia coli]
 gi|42277|emb|CAA23594.1| unnamed protein product [Escherichia coli]
 gi|146325|gb|AAA83875.1| H+ ATPase F1 beta subunit [Escherichia coli]
 gi|148139|gb|AAA24737.1| ATP synthase beta subunit [Escherichia coli]
 gi|290581|gb|AAA62084.1| ATP synthase F1 beta subunit [Escherichia coli]
 gi|899257|emb|CAA25782.1| unnamed protein product [Escherichia coli]
 gi|1790170|gb|AAC76755.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. MG1655]
 gi|13364149|dbj|BAB38097.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli
           O157:H7 str. Sakai]
 gi|24054294|gb|AAN45252.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           flexneri 2a str. 301]
 gi|30043224|gb|AAP18945.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           flexneri 2a str. 2457T]
 gi|73857719|gb|AAZ90426.1| membrane-bound ATP synthase, F1 sector, beta subunit [Shigella
           sonnei Ss046]
 gi|81247518|gb|ABB68226.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           boydii Sb227]
 gi|85676306|dbj|BAE77556.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K12 substr. W3110]
 gi|91074831|gb|ABE09712.1| membrane-bound ATP synthase F1 sector beta-subunit [Escherichia
           coli UTI89]
 gi|110345665|gb|ABG71902.1| ATP synthase beta chain [Escherichia coli 536]
 gi|110617104|gb|ABF05771.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           flexneri 5 str. 8401]
 gi|115515129|gb|ABJ03204.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia
           coli APEC O1]
 gi|157078434|gb|ABV18142.1| ATP synthase F1, beta subunit [Escherichia coli E24377A]
 gi|169757159|gb|ACA79858.1| ATP synthase F1, beta subunit [Escherichia coli ATCC 8739]
 gi|169891068|gb|ACB04775.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170124121|gb|EDS93052.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627]
 gi|170518907|gb|ACB17085.1| ATP synthase F1, beta subunit [Escherichia coli SMS-3-5]
 gi|187429913|gb|ACD09187.1| ATP synthase F1, beta subunit [Shigella boydii CDC 3083-94]
 gi|187771754|gb|EDU35598.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016914|gb|EDU55036.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4113]
 gi|188488877|gb|EDU63980.1| ATP synthase F1, beta subunit [Escherichia coli 53638]
 gi|189002239|gb|EDU71225.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4076]
 gi|189359262|gb|EDU77681.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364495|gb|EDU82914.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369653|gb|EDU88069.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373310|gb|EDU91726.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869]
 gi|189378771|gb|EDU97187.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508]
 gi|190904130|gb|EDV63841.1| ATP synthase F1, beta subunit [Escherichia coli B7A]
 gi|190909212|gb|EDV68798.1| ATP synthase F1, beta subunit [Escherichia coli F11]
 gi|192930489|gb|EDV83096.1| ATP synthase F1, beta subunit [Escherichia coli E22]
 gi|192957531|gb|EDV87977.1| ATP synthase F1, beta subunit [Escherichia coli E110019]
 gi|194413819|gb|EDX30097.1| ATP synthase F1, beta subunit [Escherichia coli B171]
 gi|194420499|gb|EDX36575.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012]
 gi|194425326|gb|EDX41310.1| ATP synthase F1, beta subunit [Escherichia coli 101-1]
 gi|208726812|gb|EDZ76413.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733369|gb|EDZ82056.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739021|gb|EDZ86703.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4042]
 gi|209162014|gb|ACI39447.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           EC4115]
 gi|209753888|gb|ACI75251.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753890|gb|ACI75252.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753892|gb|ACI75253.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753894|gb|ACI75254.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209753896|gb|ACI75255.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli]
 gi|209914472|dbj|BAG79546.1| ATP synthase beta subunit [Escherichia coli SE11]
 gi|215267142|emb|CAS11590.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli O127:H6 str. E2348/69]
 gi|217320873|gb|EEC29297.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str.
           TW14588]
 gi|218354190|emb|CAV00818.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli 55989]
 gi|218358808|emb|CAQ91465.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           fergusonii ATCC 35469]
 gi|218363072|emb|CAR00710.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli IAI1]
 gi|218367576|emb|CAR05360.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli S88]
 gi|218372568|emb|CAR20442.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli IAI39]
 gi|218429584|emb|CAR10542.2| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli ED1a]
 gi|218434475|emb|CAR15402.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli UMN026]
 gi|222035445|emb|CAP78190.1| ATP synthase subunit beta [Escherichia coli LF82]
 gi|226838916|gb|EEH70943.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           1_1_43]
 gi|226902797|gb|EEH89056.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp.
           3_2_53FAA]
 gi|227839232|gb|EEJ49698.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972]
 gi|238861068|gb|ACR63066.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli BW2952]
 gi|242379270|emb|CAQ34077.1| ATP synthase, F1 complex, beta subunit, subunit of beta subunit
           complex, ATP synthase, F1 complex and ATP synthase
           [Escherichia coli BL21(DE3)]
 gi|253326677|gb|ACT31279.1| ATP synthase F1, beta subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975585|gb|ACT41256.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606]
 gi|253979741|gb|ACT45411.1| F0F1 ATP synthase subunit beta [Escherichia coli BL21(DE3)]
 gi|254595138|gb|ACT74499.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli O157:H7 str. TW14359]
 gi|257756502|dbj|BAI28004.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O26:H11 str. 11368]
 gi|257761630|dbj|BAI33127.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O103:H2 str. 12009]
 gi|257766822|dbj|BAI38317.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD
           [Escherichia coli O111:H- str. 11128]
 gi|260451411|gb|ACX41833.1| ATP synthase F1, beta subunit [Escherichia coli DH1]
 gi|281180790|dbj|BAI57120.1| ATP synthase beta subunit [Escherichia coli SE15]
 gi|281603130|gb|ADA76114.1| ATP synthase subunit beta [Shigella flexneri 2002017]
 gi|284923846|emb|CBG36945.1| ATP synthase beta subunit [Escherichia coli 042]
 gi|290765029|gb|ADD58990.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615]
 gi|291321690|gb|EFE61126.1| ATP synthase F1 [Escherichia coli B088]
 gi|291425660|gb|EFE98696.1| ATP synthase subunit beta [Escherichia coli FVEC1412]
 gi|291431236|gb|EFF04229.1| ATP synthase F1 [Escherichia coli B185]
 gi|291468315|gb|EFF10810.1| ATP synthase F1 [Escherichia coli B354]
 gi|294493929|gb|ADE92685.1| ATP synthase F1, beta subunit [Escherichia coli IHE3034]
 gi|298276947|gb|EFI18465.1| ATP synthase subunit beta [Escherichia coli FVEC1302]
 gi|300300541|gb|EFJ56926.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1]
 gi|300306857|gb|EFJ61377.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1]
 gi|300314621|gb|EFJ64405.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1]
 gi|300360047|gb|EFJ75917.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1]
 gi|300398393|gb|EFJ81931.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1]
 gi|300404981|gb|EFJ88519.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1]
 gi|300408390|gb|EFJ91928.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1]
 gi|300418336|gb|EFK01647.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1]
 gi|300450049|gb|EFK13669.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1]
 gi|300454348|gb|EFK17841.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1]
 gi|300522959|gb|EFK44028.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7]
 gi|300531905|gb|EFK52967.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1]
 gi|300839127|gb|EFK66887.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1]
 gi|300848138|gb|EFK75898.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1]
 gi|301077247|gb|EFK92053.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1]
 gi|305850312|gb|EFM50769.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101]
 gi|306906879|gb|EFN37388.1| ATP synthase F1, beta subunit [Escherichia coli W]
 gi|307555871|gb|ADN48646.1| ATP synthase beta chain [Escherichia coli ABU 83972]
 gi|307628806|gb|ADN73110.1| F0F1 ATP synthase subunit beta [Escherichia coli UM146]
 gi|308120590|gb|EFO57852.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7]
 gi|309704180|emb|CBJ03527.1| ATP synthase beta subunit [Escherichia coli ETEC H10407]
 gi|312948298|gb|ADR29125.1| F0F1 ATP synthase subunit beta [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313647652|gb|EFS12100.1| ATP synthase F1, beta subunit [Shigella flexneri 2a str. 2457T]
 gi|315063042|gb|ADT77369.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia
           coli W]
 gi|315138317|dbj|BAJ45476.1| ATP synthase subunit beta [Escherichia coli DH1]
 gi|315254575|gb|EFU34543.1| ATP synthase F1, beta subunit [Escherichia coli MS 85-1]
 gi|315285514|gb|EFU44956.1| ATP synthase F1, beta subunit [Escherichia coli MS 110-3]
 gi|315292848|gb|EFU52200.1| ATP synthase F1, beta subunit [Escherichia coli MS 153-1]
 gi|315296876|gb|EFU56165.1| ATP synthase F1, beta subunit [Escherichia coli MS 16-3]
 gi|320174622|gb|EFW49758.1| ATP synthase beta chain [Shigella dysenteriae CDC 74-1112]
 gi|320186285|gb|EFW61021.1| ATP synthase beta chain [Shigella flexneri CDC 796-83]
 gi|320191164|gb|EFW65814.1| ATP synthase beta chain [Escherichia coli O157:H7 str. EC1212]
 gi|320193723|gb|EFW68356.1| ATP synthase beta chain [Escherichia coli WV_060327]
 gi|320201236|gb|EFW75817.1| ATP synthase beta chain [Escherichia coli EC4100B]
 gi|320639460|gb|EFX09075.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           G5101]
 gi|320644900|gb|EFX13936.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str.
           493-89]
 gi|320650166|gb|EFX18662.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str. H
           2687]
 gi|320655515|gb|EFX23450.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661138|gb|EFX28574.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666267|gb|EFX33273.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323155413|gb|EFZ41596.1| ATP synthase F1, beta subunit [Escherichia coli EPECa14]
 gi|323380896|gb|ADX53164.1| ATP synthase F1, beta subunit [Escherichia coli KO11]
 gi|323934917|gb|EGB31295.1| ATP synthase F1 [Escherichia coli E1520]
 gi|323939205|gb|EGB35418.1| ATP synthase F1 [Escherichia coli E482]
 gi|323944208|gb|EGB40288.1| ATP synthase F1 [Escherichia coli H120]
 gi|323949975|gb|EGB45859.1| ATP synthase F1 [Escherichia coli H252]
 gi|323954973|gb|EGB50751.1| ATP synthase F1 [Escherichia coli H263]
 gi|323959798|gb|EGB55448.1| ATP synthase F1 [Escherichia coli H489]
 gi|323965800|gb|EGB61251.1| ATP synthase F1 [Escherichia coli M863]
 gi|323971211|gb|EGB66457.1| ATP synthase F1 [Escherichia coli TA007]
 gi|323975200|gb|EGB70304.1| ATP synthase F1 [Escherichia coli TW10509]
 gi|324008032|gb|EGB77251.1| ATP synthase F1, beta subunit [Escherichia coli MS 57-2]
 gi|324012762|gb|EGB81981.1| ATP synthase F1, beta subunit [Escherichia coli MS 60-1]
 gi|324018470|gb|EGB87689.1| ATP synthase F1, beta subunit [Escherichia coli MS 117-3]
 gi|324111631|gb|EGC05612.1| ATP synthase F1 [Escherichia fergusonii B253]
 gi|324115912|gb|EGC09838.1| ATP synthase F1 [Escherichia coli E1167]
 gi|325499538|gb|EGC97397.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ECD227]
 gi|326340520|gb|EGD64319.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1044]
 gi|326341586|gb|EGD65375.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1125]
 gi|327250884|gb|EGE62586.1| ATP synthase F1, beta subunit [Escherichia coli STEC_7v]
 gi|330908045|gb|EGH36564.1| ATP synthase beta chain [Escherichia coli AA86]
 gi|331036753|gb|EGI08979.1| ATP synthase F1, beta subunit [Escherichia coli H736]
 gi|331042056|gb|EGI14200.1| ATP synthase F1, beta subunit [Escherichia coli M605]
 gi|331047409|gb|EGI19487.1| ATP synthase F1, beta subunit [Escherichia coli M718]
 gi|331053291|gb|EGI25324.1| ATP synthase F1, beta subunit [Escherichia coli TA206]
 gi|331057896|gb|EGI29882.1| ATP synthase F1, beta subunit [Escherichia coli TA143]
 gi|331062644|gb|EGI34564.1| ATP synthase F1, beta subunit [Escherichia coli TA271]
 gi|331067664|gb|EGI39066.1| ATP synthase F1, beta subunit [Escherichia coli TA280]
 gi|331073008|gb|EGI44333.1| ATP synthase F1, beta subunit [Escherichia coli H591]
 gi|331077830|gb|EGI49042.1| ATP synthase F1, beta subunit [Escherichia coli H299]
 gi|332084602|gb|EGI89796.1| ATP synthase F1, beta subunit [Shigella boydii 5216-82]
 gi|332104825|gb|EGJ08171.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp.
           D9]
 gi|332345722|gb|AEE59056.1| ATP synthase F1, beta subunit AtpD [Escherichia coli UMNK88]
 gi|332750741|gb|EGJ81149.1| ATP synthase F1, beta subunit [Shigella flexneri 4343-70]
 gi|332750905|gb|EGJ81311.1| ATP synthase F1, beta subunit [Shigella flexneri K-671]
 gi|332998044|gb|EGK17649.1| ATP synthase F1, beta subunit [Shigella flexneri K-272]
          Length = 460

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|312881284|ref|ZP_07741082.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309371176|gb|EFP98630.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 439

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 162/420 (38%), Positives = 233/420 (55%), Gaps = 15/420 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
               G I  +T      T        G+         D   +V+ I  +  ++ P     
Sbjct: 27  SRHFGKILEVTPTLIRSTL--PGARQGELCTI---GEDLKAEVVAIRGEEAWLSPFRATT 81

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I     V   G   R+       G+V++ LG+ ++G   +       +   + P  + R
Sbjct: 82  GIGTDMRVEPVGHGHRVMVGDELLGKVVDGLGQSMEG---VRWHGEWKDNQGEAPDPLKR 138

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           + + +  +TG+R ID    +  GQRIG+FA +G GKSTLL M A     D V+++LVGER
Sbjct: 139 KLITQVMRTGVRAIDSTLTIGIGQRIGIFAAAGGGKSTLLGMLAGHCDADVVVLALVGER 198

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI         +K V+VVATSD+ P+ R  A +TA TIAEYF  KG NVLL++D
Sbjct: 199 GREVREFIEYCLPPSVREKMVLVVATSDKPPLERFKAAMTATTIAEYFRDKGQNVLLMVD 258

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA + REI   +GE PVA G+P SVF +L  LLER GP+    G+ITA+ +VLV+G
Sbjct: 259 SLTRFARAGREIGLAAGEPPVANGFPPSVFVQLASLLERAGPASV--GSITAIYTVLVEG 316

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           DN N+P+AD VRSILDGH+VL+R LA  G YP +D  ASVSR+ D+  +   K   + L 
Sbjct: 317 DNINEPVADEVRSILDGHVVLSRKLAGSGHYPAIDVNASVSRVMDQIVTGQHKANANHLR 376

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           HL+  ++E + +  +G Y+ G D   D+AV +   I  FL Q   + +    F+++ ++L
Sbjct: 377 HLLALYQEVQLLIRVGEYQVGQDSETDEAVDKYKQIERFLCQDTHEQTD---FEQVLEQL 433


>gi|186886325|gb|ACC93565.1| ATPase F1 alpha subunit [Juncus hallii]
          Length = 349

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 89/348 (25%), Positives = 152/348 (43%), Gaps = 15/348 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 120 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 179

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 180 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 239

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 240 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 299

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 300 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 347


>gi|241664766|ref|YP_002983126.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12D]
 gi|309780425|ref|ZP_07675175.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA]
 gi|240866793|gb|ACS64454.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12D]
 gi|308920818|gb|EFP66465.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA]
          Length = 469

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   D
Sbjct: 55  LGDGVVRTIALGSSDGLRRGMRVATTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-ASD 113

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 114 EKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 173

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 174 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 233

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 234 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 291

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 292 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 351

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 352 QLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILGMDELS-PEDKLAVGRARKIQRFLS 410

Query: 419 QS 420
           Q 
Sbjct: 411 QP 412


>gi|14718250|gb|AAK72863.1| ATP synthase beta subunit [Tetrameles nudiflora]
          Length = 481

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVLDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|53802691|ref|YP_112553.1| F0F1 ATP synthase subunit beta [Methylococcus capsulatus str. Bath]
 gi|81823727|sp|Q60CR4|ATPB_METCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|53756452|gb|AAU90743.1| ATP synthase F1, beta subunit [Methylococcus capsulatus str. Bath]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 188/410 (45%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I           + +      ++     D +G V+     +   +V    +G
Sbjct: 1   MSSGKIVQIIGAVVDAEFPRESLP----KIYDALRVDEVGLVLEVQQQLGDGVVRCIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG PID    +G+ +    I  K P  
Sbjct: 57  STDGVRRGVTVTNTGAPISVPVGTETLGRIMNVLGDPIDEKGPIGEKE-RWGIHRKAPSY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 116 QDQAAANELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F  +G +
Sbjct: 176 AGVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ 
Sbjct: 236 VLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPNLAEEMGILQERI--TSTKTGSITSIQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGHEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +   + R++E RDI  I G     +      V +   I  FL Q 
Sbjct: 354 ETTRRVQSTLQRYKELRDIIAILGMDELSEND-KLIVSRARKIQRFLSQP 402


>gi|50123428|ref|YP_052595.1| F0F1 ATP synthase subunit beta [Pectobacterium atrosepticum
           SCRI1043]
 gi|81826953|sp|Q6CYJ5|ATPB_ERWCT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49613954|emb|CAG77407.1| ATP synthase beta chain [Pectobacterium atrosepticum SCRI1043]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 187/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   IV    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLNVNNLGHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEE-RWAIHRSAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|257852954|gb|ACV71488.1| ATP synthase beta subunit [Cyrillopsis paraensis]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRAAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEDNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|238025753|ref|YP_002909984.1| F0F1 ATP synthase subunit beta [Burkholderia glumae BGR1]
 gi|237874947|gb|ACR27280.1| ATP synthase F1, beta subunit [Burkholderia glumae BGR1]
          Length = 464

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 189/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D +  +G       Q  ++   IV    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRESMPKIYDALTLEGTELTLEVQ-QQLGDGIVRTICL 60

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G LV + G+   +       GR+++ LG+PID    + + +    I  K P 
Sbjct: 61  GASDGLRRGVLVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHQRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     +E 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 371 KLV-SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G            V +   I  FL Q 
Sbjct: 358 YTITRGVQQTLQRYKELRDIIAILGMDELS-PEDKLTVARARKIQRFLSQP 407


>gi|16943747|emb|CAD10761.1| atp synthase, beta subunit [Hanguana malayana]
          Length = 486

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|237739747|ref|ZP_04570228.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31]
 gi|262066569|ref|ZP_06026181.1| ATP synthase F1, beta subunit [Fusobacterium periodonticum ATCC
           33693]
 gi|229423355|gb|EEO38402.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31]
 gi|291379704|gb|EFE87222.1| ATP synthase F1, beta subunit [Fusobacterium periodonticum ATCC
           33693]
          Length = 462

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 195/408 (47%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           +  G I+ I S    V    +   + + +  + ++ + + +V   +  ++V    +   +
Sbjct: 1   MNRGTITQIISAVVDVAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTD 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G+   +       GR++N LG+P+D    +   +  + I  + P   + 
Sbjct: 61  GLKRGMEVIDTGKPITVPVGKAVLGRILNVLGEPVDNQGPVN-AETVLPIHREAPEFDDL 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
           +   + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 120 ETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGV 179

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE R+   +      + K+ +V    +E P  R    LT +T+AE F  K   +VL
Sbjct: 180 GERTREGRDLYNEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKL 372
            V  D+  DP   +  S LD   VL+R++A  G YP VDPL S S+ L++     +  ++
Sbjct: 298 YVPADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGKEHYEI 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 358 ARKVQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIERFFSQP 404


>gi|6688962|emb|CAB65337.1| ATP synthase beta subunit [Petunia axillaris]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I ++ ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVSCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAAISVPVGGATLGRIFNVLGEPVDNLGPVDTSTMS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLSQP 434


>gi|6687280|emb|CAB64905.1| ATP synthase beta subunit [Codonopsis pilosula]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|57868960|gb|AAW57476.1| ATP synthase beta subunit [Shortia soldanelloides]
          Length = 493

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      VT  +  +       VV   ++ D +GQ I +  ++        V   
Sbjct: 17  GRIVQIIGPVLDVTFPTDKMPNIYNALVV---QSRDTVGQPINVTCEVQQLLGNNRVRAV 73

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 74  AMSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRAA 132

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 133 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 192

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 193 SVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 252

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 253 AEYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 310

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 311 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 370

Query: 361 ADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 371 LQPWILGEEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQ 429

Query: 420 S 420
            
Sbjct: 430 P 430


>gi|323715460|gb|ADY04798.1| ATP synthase beta subunit [Cardiandra alternifolia]
          Length = 481

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 5   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 63  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|317404545|gb|EFV84952.1| ATP synthase subunit beta [Achromobacter xylosoxidans C54]
          Length = 466

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    + + D
Sbjct: 52  LGDGVVRTIALGSSDGLRRGMKVAGTGAPISVPVGTGTLGRIMDVLGRPIDEAGEI-QHD 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 EKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 231 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSR 348

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +   +   + R++E RDI  I G          +AV +   I  FL 
Sbjct: 349 QLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILGMDELS-PEDKQAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|33440420|gb|AAQ19118.1| ATPase alpha subunit [Dioscorea communis]
          Length = 379

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 22/384 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 3   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 60  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 119 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSQSETLYCVYVAIGQKRSTVAQLVQILPEAN 178

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 179 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 238

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 239 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 298

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 299 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 355

Query: 391 LIGGYRPGVDLILDKAVHQVPIIY 414
               +   +D      +++   + 
Sbjct: 356 AFAQFGSDLDAATQALLNRGARLT 379


>gi|8517661|emb|CAB94382.1| ATP synthase beta subunit [Silene nutans]
          Length = 488

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V  L   +  + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 19  GRIAQIIGPVLDVXFLQXKMPNIYNALVVKGRDTASQPINVTCEVQQLLGNNRVRAVAMS 78

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G    +       GR+ N LG+P+D    +G    S  I    P  
Sbjct: 79  ATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVGTHTTS-PIHRSAPAF 137

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 138 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 197

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 198 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 257

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 258 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 315

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 316 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 375

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 RIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7582352|gb|AAF64291.1| ATP synthase beta subunit [Eustrephus latifolius]
          Length = 495

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|16943745|emb|CAD10760.1| atp synthase, beta subunit [Polygonatum hookeri]
          Length = 492

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|16943670|emb|CAD10763.1| atp synthase, beta subunit [Dianella ensifolia]
          Length = 497

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|313184000|ref|YP_004021157.1| ATP synthase CF1 beta subunit [Castanea mollissima]
 gi|75324403|sp|Q6QBP2|ATPB_CASSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|45268497|gb|AAS55870.1| ATP synthase [Castanea sativa]
 gi|309321527|gb|ADO65067.1| ATP synthase CF1 beta subunit [Castanea mollissima]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      VT   + +       VV   K  D  GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVTFPPRKMPNIYNALVV---KGRDTAGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|1929513|gb|AAB51466.1| ATP synthase subunit beta [Moorella thermoacetica]
          Length = 462

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 187/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G +  +      V   S  +  L + +  +    +   + ++ +  + V    +   + +
Sbjct: 4   GQVVQVIGPVVDVEFASDRLPDLYNAITIKTDKINITMEAMQHLGNNTVRCVALSSTDGL 63

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+PID    +   +  + I    P    +Q 
Sbjct: 64  QRGMKAVDTGQPITVPVGRATLGRLFNVLGEPIDNQGPVETTE-RLPIHRPAPSFEEQQP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+  ++     + S VGE
Sbjct: 123 STEVLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFSGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R    LT +T+ EYF      +VLL 
Sbjct: 183 RTREGNDLYLEMKESGVLEKTALVFGQMNEPPGARLRVGLTGLTMPEYFRDPEAQDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF     E++     +P A GY  ++ +E+  L ERI  +  +KG+IT+V ++ V
Sbjct: 243 IDNIFRFVQPGSEVSALLARMPSAVGYQPTLPTEMGPLQERI--TSTKKGSITSVQAIYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +  ++V 
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRVLGEEHYQVVR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 GVQQVLQRYKELQDIIAILGMDELSEDD-KLIVARARKIQRFLSQP 405


>gi|304313401|ref|YP_003812999.1| F1-ATP synthase, beta subunit [gamma proteobacterium HdN1]
 gi|301799134|emb|CBL47377.1| F1-ATP synthase, beta subunit [gamma proteobacterium HdN1]
          Length = 459

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+   N D++  V+     +   +V    +G
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVP----KVYDALNVDSVSTVLEVQQQLGDGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V +  +   +       GR+++ LG  ID    +G+ +    I  K P  
Sbjct: 57  STEGLRRGLNVQNTNKAISVPVGKETLGRIMDVLGNAIDEAGPIGEQE-RASIHRKSPTF 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 116 AEQAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ 
Sbjct: 236 VLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +V V  D+  DP   +  S LD  +VL+R +A +G YP +DPL S SR  D     DE  
Sbjct: 294 AVYVPADDLTDPSPATTFSHLDATVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGDEHY 353

Query: 372 -LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +    + V++   I  FL Q 
Sbjct: 354 TVARGVQTVLQRYKELKDIIAILGMDELSEED-KQVVNRARKIERFLSQP 402


>gi|195183501|dbj|BAG66964.1| ATP synthase beta subunit [Hybanthus calceolaria]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALIVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGNEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|155029339|dbj|BAF75553.1| ATP synthase beta subunit [Elateriospermum tapos]
          Length = 486

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|5001593|gb|AAD37043.1|AF092117_1 ATP synthase beta subunit [Coriaria myrtifolia]
          Length = 494

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 16  SGRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAV 73

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 74  AMSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 132

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 133 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 192

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 193 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 252

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 253 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 310

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 311 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 370

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 371 LQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQ 429

Query: 420 S 420
            
Sbjct: 430 P 430


>gi|57868958|gb|AAW57475.1| ATP synthase beta subunit [Galax urceolata]
          Length = 475

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPWILGEEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|34501408|ref|NP_904195.1| ATP synthase CF1 beta subunit [Physcomitrella patens subsp. patens]
 gi|38258930|sp|P80658|ATPB_PHYPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|34494778|dbj|BAC85045.1| ATP synthase beta subunit [Physcomitrella patens subsp. patens]
          Length = 494

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      VT    +   + + ++ +G+N+   GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVTFPPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMDVVDTGAALSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLSQP 434


>gi|118917394|dbj|BAF40503.1| ATP synthase beta subunit [Piriqueta cistoides]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 184/423 (43%), Gaps = 29/423 (6%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
              G I  I      V     +   + + +V +G+N   +GQ I +  ++        V 
Sbjct: 10  TNQGRIVQIIGPVLDVAFPPGRIPNIYNALVVKGRNP--IGQQIHVTCEVQKLLGNNRVR 67

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I  
Sbjct: 68  AVAMSATDGLTRGMQVIDTGAALTVPVGEATLGRIFNVLGEPVDDLGPVDTRTAS-PIHR 126

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 127 SAPAFIQLDTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 186

Query: 191 ---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
              + + VGER RE  +  ++               K  +V    +E P  R    LTA+
Sbjct: 187 GVSVFAGVGERTREGNDLYKEMKESGVINEENLTESKVALVYGQMNEPPGARMRVGLTAL 246

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 247 TMAEYFRDVNKQSVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI- 305

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 306 -TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 364

Query: 359 RLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +       D        +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 365 TMLQSQIVGDEHYDTAQRVKQTLQRYKELQDIIAIMGMDELTEED-RLTVARARKIERFL 423

Query: 418 KQS 420
            Q 
Sbjct: 424 SQP 426


>gi|30351899|emb|CAD48102.1| ATP synthase beta subunit [Ledebouria sp. MP H641]
          Length = 495

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVIKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|91208909|ref|YP_538942.1| ATP synthase CF1 beta subunit [Gossypium hirsutum]
 gi|325210937|ref|YP_004286011.1| ATP synthase CF1 beta subunit [Gossypium thurberi]
 gi|118573540|sp|Q2L917|ATPB_GOSHI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|85687423|gb|ABC73635.1| ATP synthase CF1 beta subunit [Gossypium hirsutum]
 gi|290775799|gb|ADD62295.1| ATP synthase CF1 beta subunit [Gossypium thurberi]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62902857|gb|AAY19343.1| ATP synthase beta subunit [Davidsonia pruriens]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 16  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 75

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 76  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 134

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 135 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 194

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 195 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 255 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 312

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 313 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 372

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 373 ILGLDELSEED-RLTVARARKIERFLSQP 400


>gi|332105877|gb|AEE01401.1| ATP synthase beta chain [Gossypium arboreum]
          Length = 493

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 16  GRISQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|307257728|ref|ZP_07539485.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863634|gb|EFM95560.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 467

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/415 (26%), Positives = 191/415 (46%), Gaps = 13/415 (3%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           + ++   V+  G I  I      V      V  + D +  +   +  + Q +     +V 
Sbjct: 3   QQFNGEQVMATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGLVR 60

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +G  + +     V + G   ++       GR++N LG+PID    +G+ +    I  
Sbjct: 61  CIALGTSDGLKRSLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGE-EARWNIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +  
Sbjct: 120 AAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHS 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 GYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVV 357

Query: 367 ADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +E   +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 GEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 411


>gi|284007073|emb|CBA72348.1| F0F1 ATP synthase subunit beta [Arsenophonus nasoniae]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 184/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GK    L    ++   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVINGKEKLILEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G D+V       +       GR++N LG PID    +G+ +    I    P   +
Sbjct: 61  DGLKRGLDVVDLAHPIEVPVGKATLGRIMNVLGDPIDMKGEIGEEE-RWAIHRAAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKAGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|4995103|emb|CAB44006.1| H(+)-transporting ATP synthase [Cola nitida]
          Length = 485

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TF 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|3273572|gb|AAC24768.1| F1-ATPase alpha subunit [Saruma henryi]
          Length = 421

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 91/412 (22%), Positives = 167/412 (40%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G            GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +
Sbjct: 58  KXTGSIVXVXAGKXMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SV R+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVXRVGSXAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 357 RGSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 405


>gi|7708276|emb|CAB90063.1| ATP synthase beta subunit [Dischidia lanceolata]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 20  GRIVQIIGPVLDVAFAPGKMPNIYNALVVKG--RDXLGQPINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKGGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPGIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|7708205|emb|CAB90047.1| ATP synthase beta subunit [Casuarina equisetifolia]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGASLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|323715504|gb|ADY04820.1| ATP synthase beta subunit [Mentzelia decapetala]
          Length = 479

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQAINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|118917382|dbj|BAF40491.1| ATP synthase beta subunit [Mascagnia rivularis]
          Length = 488

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|257042549|gb|ACV32822.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 96/424 (22%), Positives = 171/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I               +PIDG   +   +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVXXXXXXXXXXXXXQPIDGKGQISASE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|119368036|dbj|BAF40531.1| ATP synthase beta subunit [Orthion subsessile]
 gi|195183518|dbj|BAG66972.1| ATP synthase beta subunit [Mayanaea caudata]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|114329753|ref|YP_740572.1| ATP synthase CF1 beta subunit [Platanus occidentalis]
 gi|122166028|sp|Q09G39|ATPB_PLAOC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|114054391|gb|ABI49785.1| ATP synthase CF1 beta subunit [Platanus occidentalis]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|305671621|gb|ADM63120.1| ATP synthase beta subunit [Triosteum perfoliatum]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPGIVGKNHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|255067774|ref|ZP_05319629.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256]
 gi|255047985|gb|EET43449.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256]
          Length = 465

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 20/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIG 78
           +  G I  I      V      +  + D +           +V ++  D +V    +G  
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDAIPRVYDALKLDANGLTL--EVQQLLGDGVVRTIAMGSS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR+++ LG P+D    +   D    I    P    
Sbjct: 59  DGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TDKHRAIHQTAPKFDE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + 
Sbjct: 118 LSATTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD--- 250
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D   
Sbjct: 178 VGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESG 237

Query: 251 ---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+I
Sbjct: 238 KGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 296 TSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLG 355

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 356 QEHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|183206668|gb|ACC54532.1| ATP synthase beta subunit [Asyneuma virgatum]
          Length = 488

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFPPGKLPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G   RE     ++               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGHDLYKEMKESGVINEQKFVESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAQGIYPAVDPLDSTSTML 365

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +D   K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPLIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|311064983|ref|YP_003971709.1| ATP synthase subunit alpha [Bifidobacterium bifidum PRL2010]
 gi|310867303|gb|ADP36672.1| AtpA ATP synthase alpha chain [Bifidobacterium bifidum PRL2010]
          Length = 561

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 94/439 (21%), Positives = 177/439 (40%), Gaps = 23/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y  +     + GY+++       VT L       + +  +      LG   
Sbjct: 15  KALDDFVESYKPSDTPTQEVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 70

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GR ++ LG PIDG   +   
Sbjct: 71  NLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRTVDPLGNPIDGLGEIKGI 130

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 131 EGRRILEAQAPDVMHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 190

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 191 INQKKNWETGDPKKQVRCIYVAIGQKGSTIASVRQSLEEAGAMEYTTIVASPASDSAGFK 250

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 251 YIAPYTGSAIGQHWMYHGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 310

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L    + P
Sbjct: 311 RLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 370

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      +++
Sbjct: 371 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKNQLNR 427

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 428 GSHLTELLKQPQFSPYSME 446


>gi|212712645|ref|ZP_03320773.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM
           30120]
 gi|212684861|gb|EEB44389.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM
           30120]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GK    L    ++   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDNVPKVYDALEVINGKEKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V +      +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLSRGLEVVNLEHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEE-RWSIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LANSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|156530103|gb|ABU75148.1| AtpB [Ailanthus triphysa]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4063548|gb|AAC98332.1| ATP synthase beta subunit [Geranium sanguineum]
          Length = 456

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           +  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  RGKDTIGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGLEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         + + VGER RE  +  ++             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGVINDQKIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       A+  ++   +   + R++E +DI  
Sbjct: 321 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGAEHYEIAQRVKQTLQRYKELQDIIS 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|239623862|ref|ZP_04666893.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521893|gb|EEQ61759.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 502

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 98/405 (24%), Positives = 173/405 (42%), Gaps = 14/405 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  +      V  + ++   G+ V+ +       G V  I  D + +   G   EI
Sbjct: 29  ETGSVIWVGDGIAIVYGM-EHAMYGEIVIFENG---VRGMVQDIRKDEIGVILFGKDTEI 84

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S G  V     R  +   + + GRV+NALG PIDG   + + D    +  + P  ++R+ 
Sbjct: 85  SQGTKVVRTKKRAGVPVGSGFLGRVVNALGDPIDGLGPVKEEDYR-PVEEEAPGIVDRKS 143

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGER 198
           V    +TGI  ID   P+  GQR  +      GK+++      +        I   +G++
Sbjct: 144 VGVPMETGILAIDSMFPIGRGQRELIIGDRQTGKTSIAIDTILNQKGKDVVCIYVAIGQK 203

Query: 199 GREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + +           ++V+ +T+ E+  L+ +AP +   +AE+F  +G +VL++ D
Sbjct: 204 ASTVAKLVSTLKKSGAMDYTIVMSSTASEAAPLQYIAPYSGTAMAEFFMHQGKDVLIVYD 263

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R ++      P    YP  VF    RLLER          G+ITA+  +  
Sbjct: 264 DLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSRLSDAKGGGSITALPIIET 323

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V SI DG I L   L   G  P V+   SVSR+   A +   KK   S
Sbjct: 324 QAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSVSRVGGAAQTKAMKKASGS 383

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + ++ E     +   +   +D    + +     + + LKQ 
Sbjct: 384 IRIDLAQYREME---VFTQFSSDLDESTKEQLAYGKRLMELLKQP 425


>gi|155029331|dbj|BAF75549.1| ATP synthase beta subunit [Blachia siamensis]
          Length = 481

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 5   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQEINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|15600747|ref|NP_254241.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAO1]
 gi|107104656|ref|ZP_01368574.1| hypothetical protein PaerPA_01005735 [Pseudomonas aeruginosa PACS2]
 gi|116053705|ref|YP_794032.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152987192|ref|YP_001351667.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PA7]
 gi|218894657|ref|YP_002443527.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa LESB58]
 gi|296392421|ref|ZP_06881896.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAb1]
 gi|313111495|ref|ZP_07797296.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016]
 gi|81539357|sp|Q9HT20|ATPB_PSEAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122256275|sp|Q02DF4|ATPB_PSEAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990372|sp|A6VF32|ATPB_PSEA7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740662|sp|B7V791|ATPB_PSEA8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|9951894|gb|AAG08939.1|AE004967_10 ATP synthase beta chain [Pseudomonas aeruginosa PAO1]
 gi|115588926|gb|ABJ14941.1| ATP synthase beta chain [Pseudomonas aeruginosa UCBPP-PA14]
 gi|150962350|gb|ABR84375.1| ATP synthase F1, beta subunit [Pseudomonas aeruginosa PA7]
 gi|218774886|emb|CAW30704.1| ATP synthase beta chain [Pseudomonas aeruginosa LESB58]
 gi|310883798|gb|EFQ42392.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016]
          Length = 458

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 189/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDAVPSIYEALKVQGVETTLEVQ-QQLGDGVVRSIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +G+ +    I  + P   ++
Sbjct: 60  GLKRGLNVDSTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RWGIHREAPSYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V 
Sbjct: 239 FIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      D     
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQDHYDTA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEAD-KLLVARARKIQRFLSQP 402


>gi|148377622|ref|YP_001256498.1| F0F1 ATP synthase subunit beta [Mycoplasma agalactiae PG2]
 gi|148291668|emb|CAL59054.1| ATP synthase beta chain [Mycoplasma agalactiae PG2]
          Length = 487

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 120/420 (28%), Positives = 193/420 (45%), Gaps = 14/420 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINL 67
              ++   N +   G +  I      V      +   L   +++ G N+  L     I  
Sbjct: 4   DKIKNSENNNLSNKGKVVQIVGPVVDVRFPKGQLPSLLNALIINYGDNTYTLEVAQHIGD 63

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V    +     +  G  V+  G    +       GR+ + LG PID  D+       M
Sbjct: 64  DTVRAISMVSTSGLPRGIDVYDTGAPISVPVGNKVLGRMFDVLGNPIDLKDAPDAEK--M 121

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I +  P    +    + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 122 PIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKGGKIGLFGGAGVGKTVLVQELINNIA 181

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            +     + + VGER RE  +   + L   + +K+ +V    +E P  R    LT +T+A
Sbjct: 182 REHGGLSVFAGVGERTREGNDLYNEMLASGVLEKTALVFGQMNEPPGARMRVALTGLTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI    
Sbjct: 242 EYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIA--S 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V +V V  D+  DP   +  + LD   VL+R++A  G YP VDPL S SRL 
Sbjct: 300 TNKGSITSVQAVYVPADDLTDPAPATTFNHLDAKTVLDRNIAALGIYPAVDPLESSSRLL 359

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      +  +    +  ++ RF+E +DI  I G     +    K V +   I +FL Q 
Sbjct: 360 DSLVIGQEHYETARRVVSILQRFKELQDIIAILGIGELSEED-KKVVARARRIRNFLSQP 418


>gi|195183499|dbj|BAG66963.1| ATP synthase beta subunit [Hybanthus bigibbosus]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIIKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 71  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGKEHYETAQRVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|139522631|gb|ABO77717.1| ATP synthase beta subunit [Burmeistera lutosa]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG++I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGELINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|110456643|gb|ABG74762.1| ATPase beta subunit [Jasminum leratii]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDTVGQAINVTCEVQQLLGNNQVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|113910836|gb|ABI48150.1| ATPase beta subunit [Sphagnum capillifolium]
          Length = 472

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 184/418 (44%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +  G  +  I    P  
Sbjct: 59  ATDGLMRGMRVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAG-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|24940268|emb|CAD43390.1| ATP synthase beta subunit [Trichodesma scotti]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|8517408|emb|CAB94295.1| ATP synthase beta subunit [Clavija eggersiana]
          Length = 476

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 2   GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|261491751|ref|ZP_05988331.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495499|ref|ZP_05991946.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308833|gb|EEY10089.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312590|gb|EEY13713.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 463

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 13/412 (3%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           ++  V+  G I  I      V      V  + D +  +   +  + Q +     +V    
Sbjct: 2   NRGTVMATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIA 59

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P
Sbjct: 60  LGSSDGLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     
Sbjct: 119 SYEEQANSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYS 178

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G
Sbjct: 179 VFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEG 238

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 239 RDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITS 296

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E
Sbjct: 297 VQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEE 356

Query: 370 KK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 HYNVARGVQGTLQRYKELKDIIAILGMDELSEDD-KRLVARARKIERFLSQP 407


>gi|183206504|gb|ACC54450.1| ATP synthase beta subunit [Codonopsis lanceolata]
          Length = 482

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 5   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 63  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|156936112|ref|YP_001440028.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii ATCC BAA-894]
 gi|166201702|sp|A7MMW9|ATPB_ENTS8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|156534366|gb|ABU79192.1| hypothetical protein ESA_04006 [Cronobacter sakazakii ATCC BAA-894]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 185/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +     N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPKVYDALEVTNGNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLPVADLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|66276289|gb|AAY44159.1| ATP synthase beta subunit [Octomeles sumatrana]
          Length = 488

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|330850637|ref|YP_004376518.1| ATP synthase CF1 beta subunit [Ptilidium pulcherrimum]
 gi|302024766|gb|ADK89612.1| ATP synthase CF1 beta subunit [Ptilidium pulcherrimum]
          Length = 492

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 185/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S  +    G I+ I      V     +   + + +V QG+NS   GQ I +  ++     
Sbjct: 11  STLVAKNVGNITQIIGPVLDVAFSPGKMPNIYNSLVVQGQNSA--GQEINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +  G  V   G    +       GR+ N LG+P+D    +     +
Sbjct: 69  NNKVRAVAMSATDGLMRGMEVMDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +   +   +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYDIAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|14717962|gb|AAK72723.1| ATP synthase beta subunit [Begonia metallica x Begonia sanguinea]
          Length = 475

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V  G   D +GQ I +  ++        V    
Sbjct: 11  GHIAQIIGPVLDVAFSPGKMPNIYNALVVXG--RDTIGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RXTVARARKIERFLSQP 424


>gi|21633359|gb|AAM52154.1| ATP synthase beta subunit [Cladostigma hildebrandtioides]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++++ +    +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQMNVACEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TKTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|15425572|emb|CAC60324.1| ATP synthase beta subunit [Dialypetalum sp. Gustafsson 244]
          Length = 495

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 18  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYKEMRESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 431


>gi|7688425|emb|CAB89739.1| ATP synthase beta subunit [Vitis aestivalis]
          Length = 487

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|108802650|ref|YP_636306.1| ATP synthase CF1 beta subunit [Eucalyptus globulus subsp. globulus]
 gi|118573535|sp|Q49KZ1|ATPB_EUCGG RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|60460816|gb|AAX21036.1| ATP synthase CF1 beta subunit [Eucalyptus globulus subsp. globulus]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|269139490|ref|YP_003296191.1| flagellum-specific ATP synthase [Edwardsiella tarda EIB202]
 gi|267985151|gb|ACY84980.1| flagellum-specific ATP synthase [Edwardsiella tarda EIB202]
 gi|304559379|gb|ADM42043.1| Flagellum-specific ATP synthase FliI [Edwardsiella tarda FL6-60]
          Length = 452

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 152/429 (35%), Positives = 230/429 (53%), Gaps = 15/429 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPV 75
             + G ++  T +    T L   + +G     +  +     D   +V+  N   +++ P+
Sbjct: 25  ARRYGKLTRATGLVLEATGL--QLPIGATCRVERHDGHQVLDVEAEVVGFNGRQLFLMPL 82

Query: 76  GIGEEISLGDLV------FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
              E I  G  V       + G+ ++       GRV++   +P+DG     + D    + 
Sbjct: 83  EEVEGIVPGARVWAPAAALNSGK-QLPLGPALLGRVLDGSARPLDGLQPPDESD-HGGLS 140

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           S+    + R  + +    G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D 
Sbjct: 141 SQPFNPLQRTPITQVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADV 200

Query: 190 VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           +++ L+GERGREV++FIE+ LG+   ++SVV+ A +D SP+LR      A  IAE F  +
Sbjct: 201 IVVGLIGERGREVKDFIENILGEEGRQRSVVIAAPADVSPLLRMQGAAYATRIAEDFRDR 260

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+IT
Sbjct: 261 GQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSIT 320

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +D  AS+SR         
Sbjct: 321 AFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAEAGHYPAIDIEASISRAMTSLIDEA 380

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
               V S   L+  ++  RD+  +G Y  G D +LD+A+   P +  FL+Q   + S   
Sbjct: 381 HYARVRSFKQLLSSYQRNRDLISVGAYARGSDPLLDQAIALYPQLEAFLQQGIFERSDYQ 440

Query: 429 VFQEITKKL 437
                 + L
Sbjct: 441 QACTALQAL 449


>gi|227823626|ref|YP_002827599.1| F0F1 ATP synthase subunit beta [Sinorhizobium fredii NGR234]
 gi|254808160|sp|C3M9S1|ATPB_RHISN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|227342628|gb|ACP26846.1| ATP synthase F1, beta subunit [Sinorhizobium fredii NGR234]
          Length = 505

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 188/412 (45%), Gaps = 19/412 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G ++ +      V     Q   + + +    K +  + +V   +  + V    +   E +
Sbjct: 37  GRVTQVIGAVVDVAFEEGQLPQILNALETDNKGNRLVLEVAQHLGENAVRTIAMDSTEGL 96

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N +G+P+D    + +      I    P  + +  
Sbjct: 97  VRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPV-ETSSRRAIHQDAPAYVEQST 155

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 156 EAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 215

Query: 198 RGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +   + +        G    K+ +V    +E P  R    LT +TIAE+F  +G
Sbjct: 216 RTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTIAEHFRDEG 275

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +   KG+IT+
Sbjct: 276 QDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITS 333

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      +
Sbjct: 334 VQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEE 393

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 394 HYEVSRKVQSTLQRYKALQDIIAILGMDELSEED-KVAVARARKIERFLSQP 444


>gi|212550722|ref|YP_002309039.1| F0F1 ATP synthase subunit alpha [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|254807673|sp|B6YR06|ATPA_AZOPC RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|212548960|dbj|BAG83628.1| F-type ATP synthase alpha subunit [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 526

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 91/434 (20%), Positives = 165/434 (38%), Gaps = 36/434 (8%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  ++     +  L+     G+ +     +   +  V+ +  D V    +G   ++  
Sbjct: 30  GRVLQVSDGVARIFGLN-NAETGELLQFDSGD---MAVVMNLEEDNVGTVLLGETSKVQE 85

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD V    R   I       GRV+N  G P+DG   +   ++ M +  K P  + R  V 
Sbjct: 86  GDRVKRTKRIVSIPMKNGMLGRVVNPFGSPLDGKGPILGKEIDMPLERKAPGVIYRCPVV 145

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------KVIISLV 195
           +  +TGI+ ID   P+  GQR  +     +GK+T+      +   +         I   +
Sbjct: 146 EPLQTGIKSIDAMIPIGRGQRELIIGDRQVGKTTISIDTIINQKANYETGDPIYCIYVAI 205

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V   +           +++VVA + +   ++  AP     I E+F   G + L+
Sbjct: 206 GQKASTVANIVNTLKEYGALNYTIIVVAAASDPAAMQFYAPFAGAAIGEFFRDTGRHALV 265

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE----------- 303
           + D +++ A + RE++           YP  +F    RLLER                  
Sbjct: 266 VYDDLSKHAVAYREVSLVLRRPSGREAYPGDIFYLHSRLLERAAKIINNDSVAASMNDLP 325

Query: 304 ---------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G++TA+  +     + +  I  +V SI DG I L   L   G  P V+  
Sbjct: 326 NNLRGQVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETGLFNAGIRPAVNVG 385

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+  KA     KK+  +L     ++ E         +   +D +    + +     
Sbjct: 386 ISVSRVGGKAQIKAMKKVAGTLKIDQAQYRELE---AFTKFGGDMDAVTRATLDKGRKNV 442

Query: 415 DFLKQSPSDLSSED 428
           + L QS  +    +
Sbjct: 443 ELLIQSQYNPLPVE 456


>gi|89242538|gb|ABD64627.1| ATPase beta subunit [Cercis canadensis]
          Length = 436

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|30351875|emb|CAD48089.1| ATP synthase beta subunit [Charybdis hesperia]
 gi|30351877|emb|CAD48090.1| ATP synthase beta subunit [Charybdis aphylla]
          Length = 492

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TPTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKDSGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|12004143|gb|AAG43911.1|AF213780_1 ATP synthase beta subunit [Jacquinia keyensis]
          Length = 487

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633331|gb|AAM52140.1| ATP synthase beta subunit [Convolvulus assyricus]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V+    +   + + +V QG+N   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVSFPPGKMPNIYNALVVQGRNNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V + G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  NGLMRGMEVINTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMNESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|57868926|gb|AAW57459.1| ATP synthase beta subunit [Ilex repanda]
          Length = 493

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFAPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|11465725|ref|NP_053869.1| ATP synthase CF1 beta subunit [Porphyra purpurea]
 gi|1703717|sp|P51259|ATPB_PORPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1276725|gb|AAC08145.1| ATP synthase CF1 beta chain [Porphyra purpurea]
          Length = 475

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 20/419 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           +     G ++ I      +     Q   + + +  Q  +     +V ++  D  V    +
Sbjct: 3   STTKSTGSVTQIIGPVLDIAFPNGQLPKVFNALKVQSTDGTITCEVQQLLGDNKVRAVSM 62

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G    +       GR+ N LG+P+D    +   + ++ I    P 
Sbjct: 63  SSTEGLKRGVEVVDTGAPISVPVGTNTLGRIFNVLGEPVDNLGPVS-SESTLPIHRPAPA 121

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
               +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 122 FTKLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 181

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 182 FGGVGERTREGNDLYMEMKESKVINEDNLKESKVALVYGQMNEPPGARMRVGLTALTMAE 241

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 242 YFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TST 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +  
Sbjct: 300 TEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQ 359

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D       +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 360 PGIVGTDHYSTAQEVKSTLQRYKELQDIIAILGLDELSEED-RQTVSRARKIERFLSQP 417


>gi|323715476|gb|ADY04806.1| ATP synthase beta subunit [Hydrangea bretschneideri]
          Length = 485

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|219871749|ref|YP_002476124.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
           F(1) subunit beta [Haemophilus parasuis SH0165]
 gi|254808153|sp|B8F774|ATPB_HAEPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219691953|gb|ACL33176.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase,
           F(1) beta subunit [Haemophilus parasuis SH0165]
          Length = 457

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 186/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVETGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 ANSTELLETGIKVIDLIAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQKTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|82779076|ref|YP_405425.1| F0F1 ATP synthase subunit beta [Shigella dysenteriae Sd197]
 gi|118573745|sp|Q329S1|ATPB_SHIDS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81243224|gb|ABB63934.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella
           dysenteriae Sd197]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALAVQNGNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|62184038|gb|AAX73330.1| ATP synthase beta subunit [Banksia benthamiana]
          Length = 497

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|284921849|emb|CBG34924.1| flagellum-specific ATP synthase [Escherichia coli 042]
          Length = 457

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 241/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N+
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNV 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|222356612|gb|ACM48836.1| ATPase alpha subunit [Tacca plantaginea]
          Length = 369

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 84/371 (22%), Positives = 153/371 (41%), Gaps = 19/371 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQIHSRGTSESETLYCVYVAIGQKRSTVAQLVQIIPEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 240 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQ 356

Query: 405 KAVHQVPIIYD 415
             +++   + +
Sbjct: 357 ALLNRGARLTE 367


>gi|183206602|gb|ACC54499.1| ATP synthase beta subunit [Prismatocarpus schlechteri]
          Length = 480

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKESGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|56675874|emb|CAD43385.2| ATP synthase beta subunit [Pardoglossum cheirifolium]
          Length = 487

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75330509|sp|Q8MBQ4|ATPB_IPOCC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633251|gb|AAM52100.1| ATP synthase beta subunit [Ipomoea coccinea]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 182/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVN-TNTTSPIHKSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                  F+TGI+V+D+  P   G +IG+F G G+GK+ L+     +         +   
Sbjct: 140 LDTKLSIFETGIKVVDLLPPYRRGGKIGLFGGXGVGKTLLIMELINNIAKAHGGLSVFGG 199

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|6687377|emb|CAB64943.1| ATP synthase beta subunit [Delarbrea michieana]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GSITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|237799238|ref|ZP_04587699.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022093|gb|EGI02150.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 394

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 147/371 (39%), Positives = 216/371 (58%), Gaps = 7/371 (1%)

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPI 113
           +   +V+  +   V++ PVG    I+ G  V      GR          GRV++  G+P+
Sbjct: 6   EVEAEVMGFSGGKVFLMPVGSVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPL 63

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + K +  + +       + R  + +    GIR I+    +  GQR+G+FAG+G+G
Sbjct: 64  DGRSPI-KAEDWVPMDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVG 122

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           KS LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R 
Sbjct: 123 KSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRL 182

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+
Sbjct: 183 RAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPK 242

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G +EK  G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D
Sbjct: 243 LVERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAID 302

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+     S +          L  R+++TRD+  +G Y  G D   D A+   P+
Sbjct: 303 IEASISRVMPAVVSPEHMAQAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPV 362

Query: 413 IYDFLKQSPSD 423
           +  + +Q+  +
Sbjct: 363 LVRYQRQALRE 373


>gi|187930577|ref|YP_001901064.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12J]
 gi|187727467|gb|ACD28632.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12J]
          Length = 469

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   D
Sbjct: 55  LGDGVVRTIALGSSDGLRRGMRVATTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-ACD 113

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 114 EKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 173

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 174 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 233

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 234 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 291

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 292 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 351

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 352 QLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILGMDELS-PEDKLAVGRARKIQRFLS 410

Query: 419 QS 420
           Q 
Sbjct: 411 QP 412


>gi|37543470|gb|AAM08916.1| ATP synthase beta subunit [Purdiaea nutans]
          Length = 462

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+    ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTFQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|6688704|emb|CAB65233.1| ATP synthase beta subunit [Myoporum mauritianum]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDIS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|25808427|gb|AAN74340.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 337

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 94/336 (27%), Positives = 154/336 (45%), Gaps = 7/336 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G+V+ +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 2   GEVVNLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 62  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 120

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 121 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 180

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 181 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIPSRLLE 240

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 241 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 300

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
             SVSR+   A     K++  +L   + ++ E +  
Sbjct: 301 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQAF 336


>gi|305671639|gb|ADM63129.1| ATP synthase beta subunit [Citronella suaveolens]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQPINVACEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|224830496|gb|ACN66343.1| ATP synthase beta chain [Carronia protensa]
          Length = 473

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMKVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|183206652|gb|ACC54524.1| ATP synthase beta subunit [Campanula persicifolia]
          Length = 471

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRTVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTWPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|14718074|gb|AAK72778.1| ATP synthase beta subunit [Hippeastrum papilio]
          Length = 497

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYVEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917380|dbj|BAF40489.1| ATP synthase beta subunit [Hiraea fagifolia]
 gi|118917384|dbj|BAF40493.1| ATP synthase beta subunit [Tetrapterys glabrifolia]
 gi|118917386|dbj|BAF40495.1| ATP synthase beta subunit [Tristellateia australasiae]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|45593086|gb|AAS68130.1| ATP synthase alpha subunit [Bifidobacterium animalis subsp. lactis
           DSM 10140]
          Length = 546

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 182/439 (41%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y+ +     + G++++       VT L       + +  +      LG   
Sbjct: 13  KALDDFVEAYTPSETPTQEVGHVATGGDGIAHVTGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG+PIDG   + K 
Sbjct: 69  NLDAREIGVVILGDFVGIEEGQEVRRTGEVLSVPVGDGFLGRVVDPLGRPIDGMGEI-KS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDQPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +    +          + +V + + +S   +
Sbjct: 188 INQKKNWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEEAGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKDVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L   G+ P
Sbjct: 308 RLLERCARVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + R+       +   +   +D      +++
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLARYRSLESFAM---FASDLDAASKAQLNR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GARLTELLKQPQFSPYSME 443


>gi|24940170|emb|CAD43369.1| ATP synthase beta subunit [Cryptantha virgata]
          Length = 488

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|47218629|emb|CAG04958.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 517

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +   G++S  + +V   +  + V    +   E +
Sbjct: 49  NGRIVAVIGAVVDVQFDEGLPPILNALEVAGRDSRLVLEVAQHLGENTVRTIAMDGTEGL 108

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +     +  I ++ P   +   
Sbjct: 109 VRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPI-TTKQTAPIHAEAPEFTDMSV 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 168 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 227

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 228 RTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 287

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 288 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 345

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 346 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAE 405

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 406 HYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 461

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 462 VFTGHLGKL 470


>gi|283794975|ref|YP_003359366.1| ATPase beta subunit [Olea europaea]
 gi|330850750|ref|YP_004376428.1| ATPase beta subunit [Olea europaea subsp. europaea]
 gi|281428694|gb|ADA69933.1| ATPase beta subunit [Olea europaea]
 gi|291059260|gb|ADD72096.1| ATP synthase CF1 beta subunit [Olea europaea]
 gi|328795440|emb|CBR30322.1| ATPase beta subunit [Olea europaea subsp. europaea]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQAINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257852972|gb|ACV71497.1| ATP synthase beta subunit [Cassipourea lanceolata]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVN-SRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|167564618|ref|ZP_02357534.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis EO147]
 gi|167571760|ref|ZP_02364634.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis C6786]
          Length = 459

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 187/406 (46%), Gaps = 11/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V+G  +  I +V            + D ++  G       Q  ++   +V    +G  + 
Sbjct: 2   VEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICLGASDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V +  +   +       GR+++ LG+PID    + + + +  I  K P      
Sbjct: 61  LRRGLVVKNTNKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 PSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL  
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V
Sbjct: 240 VDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      +   +  
Sbjct: 298 PADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 RVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 402


>gi|156050413|ref|XP_001591168.1| ATP synthase beta chain, mitochondrial [Sclerotinia sclerotiorum
           1980]
 gi|154692194|gb|EDN91932.1| ATP synthase beta chain, mitochondrial [Sclerotinia sclerotiorum
           1980 UF-70]
          Length = 518

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 178/410 (43%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G I  +      V   ++ +   L       G N   L     +  ++V    +   E +
Sbjct: 41  GKIHQVIGAVVDVKFDTEKLPPILNALETDNGGNKLILEVAQHLGENVVRTIAMDGTEGL 100

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +   A   GR++N  G PID    + K D  + I +  PP   +  
Sbjct: 101 VRGHRATDTGSPIMVPVGAGTLGRIMNVTGDPIDERGPI-KTDKRLPIHADAPPFTEQST 159

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 160 TAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGE 219

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           R RE  +   +         D   K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 220 RTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTGLTLAEQFREEGQD 279

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +   KG+IT+V 
Sbjct: 280 VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGSMQERI--TTTTKGSITSVQ 337

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      D  
Sbjct: 338 AVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGQDHY 397

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              + +  ++  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 398 DTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQP 446


>gi|139389425|ref|YP_001123122.1| ATP synthase CF1 beta subunit [Olimarabidopsis pumila]
 gi|190358694|sp|A4QJU0|ATPB_OLIPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286319|dbj|BAF49946.1| ATPase beta subunit [Olimarabidopsis pumila]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|90413754|ref|ZP_01221742.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
 gi|90325223|gb|EAS41720.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
          Length = 468

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 190/416 (45%), Gaps = 20/416 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGK-NSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  I      V      V  + D +    K N   + +V + +   +V    +G 
Sbjct: 1   MATGKIVQIIGAVVDVEFPQDSVPRIYDALKVDAKENGILILEVQQQLGGGVVRGIAMGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + GR   +       GR++N LG+PID    +G+ +    I  + P   
Sbjct: 61  SDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGE-EQRYAIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 EQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDFYFEMQEAGVVNIENPSESKVAMVYGQMNEPPGNRLRVALTGLTMAERF 239

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G
Sbjct: 240 RDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D   
Sbjct: 298 SITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLV 357

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  L+ R++E +DI  I G     +    +AV +   I  FL Q 
Sbjct: 358 VGQEHYDIARGVQSLLQRYKELKDIIAILGMDELSEDD-KQAVSRARKIERFLTQP 412


>gi|21633461|gb|AAM52205.1| ATP synthase beta subunit [Schizanthus pinnatus]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGASISVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|7636090|emb|CAB88710.1| ATPase subunit I [Spinacia oleracea]
          Length = 431

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 98/354 (27%), Positives = 158/354 (44%), Gaps = 10/354 (2%)

Query: 75  VGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G G  I  G  V   GR  +I  S  + GRVINAL KPIDG   +   +  + I S  P
Sbjct: 1   MGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEITASESRL-IESPAP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI-- 191
             M+R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +     VI  
Sbjct: 60  GIMSRRSVYEPLQTGLIAIDAMIPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICV 119

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + + ++        ++VV  T+D    L+ +AP T   +AEYF  +  
Sbjct: 120 YVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRER 179

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNIT 308
           + L+I D +++ A + R+++      P    YP  VF    RLLER         +G++T
Sbjct: 180 HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMT 239

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A    
Sbjct: 240 ALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKA 299

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            KK+   L   + +F E         +   +D      + +   + + LKQ  S
Sbjct: 300 MKKVAGKLKLELAQFAELE---AFAQFASDLDKATQNQLARGQRLRELLKQPQS 350


>gi|126002169|ref|XP_001352282.1| ATPsyn-beta [Drosophila pseudoobscura pseudoobscura]
 gi|195173595|ref|XP_002027573.1| GL18400 [Drosophila persimilis]
 gi|54640128|gb|EAL29273.1| ATPsyn-beta [Drosophila pseudoobscura pseudoobscura]
 gi|194114485|gb|EDW36528.1| GL18400 [Drosophila persimilis]
          Length = 506

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +    ++   + +V   +  + V    +   E +
Sbjct: 38  NGKIVAVIGAVVDVQFDDDLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 97

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI   A   GR++N +G+PID    +   D +  I ++ P  +    
Sbjct: 98  VRGQKVLDTGYPIRIPVGAETLGRIMNVIGEPIDERGPI-PTDKTAPIHAEAPEFIEMSV 156

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 157 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 216

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 217 RTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 276

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 277 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITS 334

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 335 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQE 394

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 395 HYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 450

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 451 VFTGHAGKL 459


>gi|332976825|gb|EGK13651.1| ATP synthase F1 sector beta subunit [Psychrobacter sp. 1501(2011)]
          Length = 475

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +V  G ++    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFTRTDVPQVYDALVVDGTDTTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG+PID    +   D    I  + P    +
Sbjct: 60  GLKRGLPVTNTGAPITVPVGDSTLGRIMDVLGRPIDEQGPVNAED-HWSIHRQAPSYDEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 ANSTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AEYF  
Sbjct: 179 GERTREGNDFYHEMQEAGVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRD 238

Query: 248 KGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           + D         L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  + 
Sbjct: 239 QKDENGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  
Sbjct: 297 TQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQL 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      D   +   +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 357 DPLVIGEDHYNVARGVQEVLQRYKELKDIIAILGMDELSEED-KMVVYRARKIQRFLSQP 415


>gi|298735620|ref|YP_003728145.1| flagellum-specific ATP synthase [Helicobacter pylori B8]
 gi|298354809|emb|CBI65681.1| flagellum-specific ATP synthase [Helicobacter pylori B8]
          Length = 434

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + +EI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQKEIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|283836156|ref|ZP_06355897.1| hypothetical protein CIT292_10581 [Citrobacter youngae ATCC 29220]
 gi|291068349|gb|EFE06458.1| ATP synthase F1, beta subunit [Citrobacter youngae ATCC 29220]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 182/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GK S  L    ++   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVMNGKESLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGHPIDMKGDIGEEE-RWAIHRAAPTYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|257852940|gb|ACV71481.1| ATP synthase beta subunit [Tapura guianensis]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAFGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|146284502|ref|YP_001174655.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri A1501]
 gi|166201728|sp|A4VS62|ATPB_PSEU5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145572707|gb|ABP81813.1| ATP synthase beta chain [Pseudomonas stutzeri A1501]
 gi|327482891|gb|AEA86201.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri DSM 4166]
          Length = 458

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/407 (28%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  QG  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDLVPNVYDALKVQGAETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG PID    +G+ +    I    P    +
Sbjct: 60  GLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGPIGEEE-RWTIHRAAPSYSEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEQD-KQLVSRARKIQRFLSQP 402


>gi|331091995|ref|ZP_08340826.1| ATP synthase subunit beta [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330402196|gb|EGG81767.1| ATP synthase subunit beta [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 463

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 193/420 (45%), Gaps = 18/420 (4%)

Query: 24  GYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ I      +         + + +     N + L  V+     +  D V    +G  
Sbjct: 7   GKITQIIGAVLDIKYADGNLPEINEAIDITRSNGEKL--VVEVAQHLGDDTVRCIAMGPT 64

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + ++ G D V       +       GR+ N LG+ ID   +    + +  I  K P    
Sbjct: 65  DGLTRGMDAVATGAPISVPVGENTLGRIFNVLGEAIDEKPAPTDVEYA-PIHRKAPAFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   
Sbjct: 124 QATEAEMLETGIKVIDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   + +    + K+ +V    +E P  R    LT +T+AEYF  KG  +V
Sbjct: 184 VGERTREGNDLYYEMMESGVINKTAMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD  +VL+R++ E G YP VDPL S SR+ D      +  K
Sbjct: 302 VYVPADDLTDPAPATTFAHLDAKVVLSRAITELGIYPAVDPLESSSRMLDPHIVGEEHYK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +  ++ +++E +DI  + G     +      V +   I  FL Q     +    F+
Sbjct: 362 VARGVQEILQKYKELQDIIAMLGMDELSEED-KLTVSRARKIQRFLSQPFFVATQFTGFE 420


>gi|30351865|emb|CAD48085.1| ATP synthase beta subunit [Oziroe acaulis]
          Length = 457

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 12  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|7578491|gb|AAF64068.1|AF132886_1 ATP synthase, B subunit [Kerria japonica]
          Length = 495

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDAVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|255009227|ref|ZP_05281353.1| F0F1 ATP synthase subunit alpha [Bacteroides fragilis 3_1_12]
 gi|313146975|ref|ZP_07809168.1| ATP synthase F1 sector subunit alpha [Bacteroides fragilis 3_1_12]
 gi|313135742|gb|EFR53102.1| ATP synthase F1 sector subunit alpha [Bacteroides fragilis 3_1_12]
          Length = 527

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 98/446 (21%), Positives = 171/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  E     + + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  EILRQQLEGIETKVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G  V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDKIKEGFTVKRTKRIASIRVGESMLGRVIDPLGEPLDGKGLIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK      T++
Sbjct: 128 YEMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +  +  +  D    I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRSNYEAGDPVYCIYVAIGQKGSTVASIVNTLRQYGAMDYTIVVAATAGDPAALQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A S RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVSYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQEEVAREMNDLPESLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLDTDLFNQGNRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +    + +       L Q  
Sbjct: 425 SGDMDPVTALTIDKGQKNARLLVQPQ 450


>gi|189162278|ref|YP_001936524.1| ATP synthase CF1 beta subunit [Fagopyrum esculentum subsp.
           ancestrale]
 gi|166065364|gb|ABY79739.1| ATP synthase CF1 beta subunit [Fagopyrum esculentum subsp.
           ancestrale]
          Length = 498

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 316 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGEEHYKTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 434


>gi|62902806|gb|AAY19318.1| ATP synthase beta subunit [Canotia holacantha]
          Length = 488

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|2731646|gb|AAB93498.1| ATPase [Helicobacter pylori]
          Length = 434

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|254779933|ref|YP_003058040.1| flagellum-specific ATP synthase [Helicobacter pylori B38]
 gi|254001846|emb|CAX30094.1| Flagellum-specific ATP synthase [Helicobacter pylori B38]
          Length = 434

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 159/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDITSESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|222150025|ref|YP_002550982.1| ATP synthase F1, beta subunit [Agrobacterium vitis S4]
 gi|221737007|gb|ACM37970.1| ATP synthase F1, beta subunit [Agrobacterium vitis S4]
          Length = 485

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 189/443 (42%), Gaps = 26/443 (5%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYI 72
             +       G ++ +      V        + + +  +      + +V   +  ++V  
Sbjct: 3   RAATQTSPAAGKVTQVIGAVVDVKFDGVLPPILNALETENGGHRLILEVAQHLGENVVRT 62

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G    +       GR++N +G+P+D    +        I   
Sbjct: 63  IAMDSTEGLVRGQPVSDTGAPISVPVGDETLGRILNVIGEPVDELGPVTTT-ARRAIHQP 121

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 122 APEYVEQSTESQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 181

Query: 191 --IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAP 235
             + + VGER RE  +   + +   +              K  +V    +E P  R    
Sbjct: 182 YSVFAGVGERTREGNDLYHEMIESKVNVDPHENGGSAAGSKCALVYGQMNEPPGARARVA 241

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +TIAE F  KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L E
Sbjct: 242 LTGLTIAEDFRDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQE 301

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT+V ++ V  D+  DP   +  + LD   VLNRS+AE+G YP VDPL 
Sbjct: 302 RI--TTTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRSIAEKGIYPAVDPLD 359

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR+ D      +  ++   +   + R++  +DI  I G     +     AV +   I 
Sbjct: 360 STSRMLDPMVVGEEHYEVARKVQSTLQRYKSLQDIIAILGMDELSEDD-KIAVARARKIE 418

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            FL Q        ++F     KL
Sbjct: 419 RFLSQP---FHVAEIFTGSPGKL 438


>gi|212637833|ref|YP_002314358.1| F0F1 ATP synthase subunit beta [Shewanella piezotolerans WP3]
 gi|226740674|sp|B8CVU5|ATPB_SHEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|212559317|gb|ACJ31771.1| ATP synthase F1, beta subunit [Shewanella piezotolerans WP3]
          Length = 458

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G +  +      V      V      V+      + G V+     +   +V    +G
Sbjct: 1   MSTGTVVQVIGAVVDVEFPHDAVPQ----VYDALEIKSEGLVLEVQQQLGGGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+P+D    +G+ D    I  + P  
Sbjct: 57  SSDGLRRGLEVVNSGSPITVPVGEKTLGRIMNVLGQPVDEAGPIGEED-RYVIHREAPSY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 116 EDQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + + +  ++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 354 DVANGVQTVLQRYKELKDIIAILGMDELSDED-KTTVFRARKIEKYLSQP 402


>gi|119368006|dbj|BAF40494.1| ATP synthase beta subunit [Galphimia glauca]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|332186743|ref|ZP_08388485.1| ATP synthase F1, beta subunit [Sphingomonas sp. S17]
 gi|332013076|gb|EGI55139.1| ATP synthase F1, beta subunit [Sphingomonas sp. S17]
          Length = 490

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 117/451 (25%), Positives = 197/451 (43%), Gaps = 28/451 (6%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRI 65
           +A  AED          G I+ +      V        +   +      +  + +V   +
Sbjct: 1   MATAAEDIRPTTATNNVGTIAQVIGAVVDVHFPENLPAILSALETDNNGTRLVLEVAQHL 60

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             + V    +   E ++ G  V   G + ++       GR++N +G+PID    +   DL
Sbjct: 61  GENTVRTIAMDTTEGLTRGQTVTDTGNQIQVPVGPATLGRILNVVGEPIDERGPV-ATDL 119

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              I +K P  + +        TGI+VID+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 120 RAPIHAKAPEFIEQSTESAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINN 179

Query: 185 DCFDKV---IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESP 228
                    + + VGER RE  +   ++L   +              K  +V    +E P
Sbjct: 180 IAKGHGGTSVFAGVGERTREGNDLYHEFLDAGVIAKDAEGNAISEGSKVALVYGQMNEPP 239

Query: 229 ILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             R    L+ + IAEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ 
Sbjct: 240 GARARVALSGLAIAEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLS 299

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           +++  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VLNR+++E G 
Sbjct: 300 TDMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAISELGI 357

Query: 348 YPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           YP VDPL S SR+ +      +  +   ++  L+ R++  +DI  I G     +      
Sbjct: 358 YPAVDPLDSTSRVLEPRIVGQEHYETARAVQSLLQRYKALQDIIAILGMDELSEED-KLT 416

Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           V +   I  FL Q        +VF  I+ K 
Sbjct: 417 VQRARKIQRFLSQP---FHVAEVFTGISGKF 444


>gi|312371563|gb|EFR19714.1| hypothetical protein AND_21925 [Anopheles darlingi]
 gi|312371564|gb|EFR19715.1| hypothetical protein AND_21926 [Anopheles darlingi]
          Length = 503

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 115/428 (26%), Positives = 197/428 (46%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +  QG+ +  + +V   +  + V    +   E + 
Sbjct: 36  GKVVAVIGAVVDVQFDDNLPPILNALEVQGRTARLVLEVAQHLGENTVRTIAMDGTEGLV 95

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   RI   A   GR+IN +G+PID    + + +LS  I ++ P  +     
Sbjct: 96  RGQRVLDTGSPIRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIEMSVE 154

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 155 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 214

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 215 TREGNDLYNEMIEGGVISLKDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 274

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 275 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSV 332

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      + 
Sbjct: 333 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 392

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 393 YNIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEV 448

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 449 FTGHAGKL 456


>gi|260913589|ref|ZP_05920066.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC
           43325]
 gi|260632365|gb|EEX50539.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC
           43325]
          Length = 457

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 185/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+   N D  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYDALNVDT-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +      +       GR++N LG+PID    +G  + +  I    P  
Sbjct: 56  SSDGLKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGPIGAEE-NWSIHRAPPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     +E  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHY 352

Query: 372 -LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 NVARGVQTTLQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|118917328|dbj|BAF40448.1| ATP synthase beta subunit [Chaetocarpus africanus]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|4995759|emb|CAB44244.1| H(+)-transporting ATP synthase [Neurada procumbens]
          Length = 484

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|7708650|emb|CAB90009.1| ATP synthase beta subunit [Sophora toromiro]
          Length = 479

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +     + +V QG+  D +GQ I +  ++        V    +   + 
Sbjct: 16  IGPVLDVVFPPGKMPNFYNALVVQGQ--DTIGQQINVTCEVQQLLGNNRVRAVAMSATDG 73

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+PID    +     +  I    P  +   
Sbjct: 74  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLD 132

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 133 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 192

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 193 ERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 252

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 253 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 310

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 311 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 370

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 EEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|5758892|gb|AAD50866.1| ATP synthase beta subunit [Hippeastrum sp. Hahn 6875]
          Length = 496

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYVEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|320198631|gb|EFW73231.1| Flagellum-specific ATP synthase FliI [Escherichia coli EC4100B]
          Length = 457

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTME-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|307931020|dbj|BAJ21371.1| ATP synthase CF1 alpha subunit [Picocystis salinarum]
          Length = 362

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 11/365 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            +  L + V  G+ +  +      +G  + +  D V    +G G  I  G  V   G+  
Sbjct: 1   RIYGLER-VMAGELLEFEDG---TVGIALNLEADNVGAVLMGDGLNIQEGSSVKATGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++     + GRV++AL +PIDG   +   +  + I S  P  + R+ V +  +TG+  ID
Sbjct: 57  QVPVGEAFLGRVVDALARPIDGKGDITSSESRL-IESPAPGIIARRSVYEPLQTGLIAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+ + +    +        +   +G++   V + +     
Sbjct: 116 AMIPIGRGQRELIIGDRQTGKTAVATDTILNQKGKDVICVYVAIGQKASSVAQLVTTLEE 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV   +D S  L+ +AP T  ++AEYF     + L+I D +++ A + R+++
Sbjct: 176 RGAMDYTIVVAVNADASATLQYLAPYTGASLAEYFMYTNRHTLVIYDDLSKQAQAYRQMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER         +G++TA+  +   G + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSSALGEGSMTALPVIETQGGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  +   G  P ++   SVSR+   A     K++   L   + +F E   
Sbjct: 296 ISITDGQIFLSADIFNSGIRPAINVGISVSRVGSAAQVKAMKQVAGKLKLELAQFAELEA 355

Query: 389 IRLIG 393
                
Sbjct: 356 FAQFA 360


>gi|138896935|ref|YP_001127388.1| F0F1 ATP synthase subunit beta [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249752|ref|ZP_03148448.1| ATP synthase F1, beta subunit [Geobacillus sp. G11MC16]
 gi|166201707|sp|A4ITI9|ATPB_GEOTN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134268448|gb|ABO68643.1| ATP synthase beta subunit [Geobacillus thermodenitrificans NG80-2]
 gi|196210628|gb|EDY05391.1| ATP synthase F1, beta subunit [Geobacillus sp. G11MC16]
          Length = 473

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID  D + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVVDTGAPISVPVGDVTLGRVFNVLGEPIDLQDDIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 AEARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPLA
Sbjct: 291 RI--TSTSKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARRVQQTLQRYKELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|119368184|dbj|BAF40433.1| ATP synthase beta subunit [Kiggelaria africana]
          Length = 489

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTHTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 426


>gi|7708151|emb|CAB89904.1| ATP synthase beta subunit [Anthericum liliago]
          Length = 480

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 219 ESKVAIVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|3929531|gb|AAC79943.1| ATP synthase beta subunit [Anisoptera marginata]
          Length = 447

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104
           K  D LGQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 24  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGALLSVPVGGLTLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +   D +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPIDNLGPVD-TDTTSPIHRPAPAFIRLATKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|47605558|sp|Q9PTY0|ATPB_CYPCA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|5689156|dbj|BAA82837.1| ATP synthase beta-subunit [Cyprinus carpio]
          Length = 518

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/429 (25%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +   G+++  + +V   +  + V    +   E +
Sbjct: 50  SGRIVAVIGAVVDVQFDEDLPPILNALEVAGRDTRLVLEVAQHLGENTVRTIAMDGTEGL 109

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +     +  I ++ P   +   
Sbjct: 110 VRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPI-TTKQTAPIHAEAPEFTDMSV 168

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 169 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 228

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 229 RTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 288

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 289 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 346

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 347 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSE 406

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 407 HYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 462

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 463 VFTGHLGKL 471


>gi|167567833|ref|ZP_02360749.1| type III secretion system ATPase [Burkholderia oklahomensis EO147]
          Length = 445

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 153/419 (36%), Positives = 225/419 (53%), Gaps = 11/419 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           V+ G +  I       T     V  GD    +    D   +V+ ++ D   + P      
Sbjct: 28  VRFGRVVEIGPTLVRATL--PGVGFGDLCRLEPSGID--AEVVAVDGDAALLSPFAEPRG 83

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I+ G  V   GR  RI+      GRV++ +G+P+D   ++      +++    P  + R 
Sbjct: 84  IAAGSAVRALGRPHRIAVGDFLLGRVVDGVGRPLDDGPAIPDDATRIDLDRAAPDPLARA 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            ++     G+R ID       GQRIG+FA +G GKSTLL M       D  +++L+GERG
Sbjct: 144 VIDTPLPLGVRAIDGVLTCGRGQRIGIFAAAGGGKSTLLGMICDGSLADVTVLALIGERG 203

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REVREF+          ++VVVV+TSD   + R  A  TA  IAE+F  +G +VLL++DS
Sbjct: 204 REVREFLERTLTPQARARAVVVVSTSDRPALERLKAAYTATAIAEHFRDQGGDVLLMMDS 263

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P A  YP S F+ LPRLLER GP+    G+IT + +VLV+GD
Sbjct: 264 LTRFARAAREIGLAAGEKPAAGSYPPSFFARLPRLLERAGPAAT--GSITGLYTVLVEGD 321

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD VRSILDGHIVL+R LA+   YP +D  ASVSR+  +   A    L + L  
Sbjct: 322 DMNEPVADEVRSILDGHIVLSRKLAQANHYPAIDVGASVSRVMAQIVDARHLALAARLRR 381

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           L   + +   +  +G Y+PG D   D A+ +   I  FL Q  ++   ++ F++   +L
Sbjct: 382 LDAVYRDIELLVRVGEYQPGRDPEADDALARRDAIRRFLCQPVTE---KNTFEQTIDQL 437


>gi|8452620|emb|CAB94250.1| ATP synthase beta subunit [Bulbine succulenta]
          Length = 492

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 47  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 107 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 165

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 166 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 225

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 226 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 286 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 344 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIA 403

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 404 ILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|6689365|emb|CAB65457.1| ATP synthase beta subunit [Schizanthus pinnatus]
          Length = 498

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGASISVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|27375551|ref|NP_767080.1| F0F1 ATP synthase subunit beta [Bradyrhizobium japonicum USDA 110]
 gi|81842025|sp|Q89X74|ATPB_BRAJA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27348688|dbj|BAC45705.1| ATP synthase beta chain [Bradyrhizobium japonicum USDA 110]
          Length = 477

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 22/420 (5%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQ-YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           +  Q G ++ +      V         L       G N   L     +    V    +  
Sbjct: 1   MAAQSGRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRTIAMDT 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   R+       GR+IN +G+PID    + K +    I  + P   
Sbjct: 61  TEGLVRGQEVTDTGSPIRVPVGEGTLGRIINVIGEPIDEAGPV-KSEGLRAIHQEAPTYT 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 DQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN------------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            VGER RE  +   +++                 K  +V    +E P  R    LT +TI
Sbjct: 180 GVGERTREGNDLYHEFIESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTI 239

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 240 AEDFRDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TT 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT+V ++ V  D+  DP   +  + LD    L+RS+AE+G YP VDPL S SR+ 
Sbjct: 298 TQKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRML 357

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   +   +  ++ R++  +DI  I G     +      V +   +  F+ Q 
Sbjct: 358 SPLVVGEEHYAVARQVQQVLQRYKALQDIIAILGMDELSEED-KLTVARARKVERFMSQP 416


>gi|309790654|ref|ZP_07685207.1| ATP synthase F1, alpha subunit [Oscillochloris trichoides DG6]
 gi|308227320|gb|EFO80995.1| ATP synthase F1, alpha subunit [Oscillochloris trichoides DG6]
          Length = 522

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 99/424 (23%), Positives = 174/424 (41%), Gaps = 20/424 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           K   V  G + ++      +  L   V   L +F V  G++    G  + +  D V    
Sbjct: 22  KPRQVNVGTVVAVGDGVARIEGLENVVASELLEFPVKAGRSEAIFGIALNLESDGVAAIV 81

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + I  GD V   GR   +       GRV+N LG+P+DG   + K D    I    P
Sbjct: 82  LGDSQSIEEGDQVNSTGRVISVPVGQSLLGRVVNPLGQPVDGKGPI-KSDTLRPIERIAP 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVI 191
             + R+ V+   +TGI  ID   P+  GQR  +      GK+ +      +   +    I
Sbjct: 141 GVITRKSVDTPVQTGIVAIDALIPVGRGQRELIIGDRQTGKTAVALDTILNQKGEGMVCI 200

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
              +G+R  ++ + +           ++VV A++ ES  L+ +AP     + E     G 
Sbjct: 201 YVAIGQRRAQIAQVVGVLEKYGALDYTIVVSASASESAALQYIAPYAGCAMGEEIMENGV 260

Query: 250 -------DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
                   + L++ D +++ A + R+++      P    YP  VF    RLLER     +
Sbjct: 261 MVDGKLVKDALIVYDDLSKHAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARLNE 320

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G++TA+  +    ++ +  I  +V SI DG I L   L   G+ P ++   SVSR+
Sbjct: 321 ANGGGSLTALPVIETQANDVSAYIPTNVISITDGQIYLESDLFNAGQRPALNVGISVSRV 380

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +   + +   L   + +F   RD+     +   +D      + +   + + LKQ 
Sbjct: 381 GSSAQTRAMRSVAGKLKGELAQF---RDLAAFAQFASDLDATTKAQIDRGQRLQELLKQL 437

Query: 421 PSDL 424
             + 
Sbjct: 438 QYNP 441


>gi|290490150|gb|ADD31482.1| ATP synthase CF1 beta subunit protein [Ilex cornuta]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFAPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQEVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257853490|gb|ACV71747.1| ATP synthase beta subunit [Oxalis acetosella]
          Length = 485

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVDFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATEGLMRGMEVIDTGVPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EFFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|237747183|ref|ZP_04577663.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
 gi|229378534|gb|EEO28625.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS]
          Length = 458

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 171/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G ++ + G    +       GR++N LG+PID    + + +
Sbjct: 45  LGDGVVRTIALGSSDGLRRGMVIQNTGNPIMVPIGEATLGRIMNVLGEPIDEQGPI-QTE 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 ERASIHRKAPAYSELSPSQEILETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKQHSGLSVFAGVGERTREGNDFYHEMQESNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 224 TIAESFRDQGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 281

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +    G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 282 TSTNTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSR 341

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +  ++ R++E RDI  I G    +       V +   +  FL 
Sbjct: 342 QLDPHVVGEEHYNTARQVQGILQRYKELRDIIAILGMDE-LAPEDKLVVARARKMQRFLS 400

Query: 419 QS 420
           Q 
Sbjct: 401 QP 402


>gi|119368010|dbj|BAF40500.1| ATP synthase beta subunit [Galearia filiformis]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|56675896|emb|CAB89996.2| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 484

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 7   SGRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAV 64

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 65  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 123

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 124 PAFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 183

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 184 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 243

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 244 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 302 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 361

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 362 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 420

Query: 420 S 420
            
Sbjct: 421 P 421


>gi|109898986|ref|YP_662241.1| F0F1 ATP synthase subunit alpha [Pseudoalteromonas atlantica T6c]
 gi|123360629|sp|Q15SF1|ATPA1_PSEA6 RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|109701267|gb|ABG41187.1| ATP synthase F1, alpha subunit [Pseudoalteromonas atlantica T6c]
          Length = 528

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/432 (26%), Positives = 190/432 (43%), Gaps = 15/432 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q   E L Q  +    NLV+Q  G + S+++    V  L       + +   G   D  G
Sbjct: 14  QYLFEHLEQSRQRAQPNLVLQEIGSVKSVSAGIAIVHGL-PSAGFEELLRFPG---DIYG 69

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               I+   + +  +G   +++ GD V   GR   I   A   GRVI+ LG+ +DG  +L
Sbjct: 70  IAFNIDEHDIGVIMLGDYSQLNAGDEVKRTGRVVDIPVGADLIGRVIDPLGRTLDGKGNL 129

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TL 177
                 M I    P  M R  V +  +TG++V+D   P+  GQR  +      GK+   +
Sbjct: 130 -TSTQRMAIERPAPEIMTRSPVTEPLQTGLKVLDALIPIGKGQRELIMGDRQTGKTSIAI 188

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPL 236
            ++  + D     +   +G++   V + +      +  + +VV+V   ++ P L  +AP 
Sbjct: 189 DAILNQKDKNVLCVYCAIGQKSASVAKILATLKHHNAFEYTVVMVTEGNDPPGLDYIAPY 248

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +I EYF  +G +VL++ D +T+ A S RE++      P    +P  +F    RLLER
Sbjct: 249 AATSIGEYFMEQGRDVLIVYDDLTQHARSYRELSLLLRRPPGREAFPGDIFYLHSRLLER 308

Query: 297 --IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G++TA+  +  +  N +  I  ++ SI DG I L+  L   G  P VD  
Sbjct: 309 STHLNEAHGGGSMTALPIIETEEQNMSAYIPTNLISITDGQIYLSPDLFSLGILPAVDVG 368

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+  KA  +  +K+  +L     +FEE       G     +D    + +     I 
Sbjct: 369 KSVSRVGGKAQRSAFRKVSGALKLAYAQFEELETFARFG---ARLDANSLQTIEHGQRIR 425

Query: 415 DFLKQSPSDLSS 426
             LKQ+ S   S
Sbjct: 426 SCLKQAESSPLS 437


>gi|222356618|gb|ACM48839.1| ATPase alpha subunit [Dioscorea tokoro]
 gi|222356620|gb|ACM48840.1| ATPase alpha subunit [Dioscorea elephantipes]
 gi|222356622|gb|ACM48841.1| ATPase alpha subunit [Dioscorea sylvatica]
          Length = 369

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 84/371 (22%), Positives = 153/371 (41%), Gaps = 19/371 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQMNSRGTSQSETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 240 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQ 356

Query: 405 KAVHQVPIIYD 415
             +++   + +
Sbjct: 357 ALLNRGARLTE 367


>gi|139522553|gb|ABO77665.1| ATP synthase beta subunit [Lysipomia pumila]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|119367978|dbj|BAF40467.1| ATP synthase beta subunit [Croton insularis]
          Length = 488

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|52082860|gb|AAU26011.1| ATPase beta subunit [Piper hispidum]
          Length = 470

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G+  D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFSPGKMPNIYNALIVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|30351901|emb|CAD48103.1| ATP synthase beta subunit [Resnova humifusa]
          Length = 494

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|7708516|emb|CAB89943.1| ATP synthase beta subunit [Nemopanthus mucronatus]
          Length = 475

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRILQIIGPVLDVAFGPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 419


>gi|7708656|emb|CAB90003.1| ATP synthase beta subunit [Stachyurus praecox]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6706178|emb|CAB65908.1| ATP synthase beta subunit [Gerbera jamesonii]
          Length = 490

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|11034791|gb|AAG27084.1| ATP synthase beta subunit [Gnetum gnemon]
          Length = 484

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 184/417 (44%), Gaps = 24/417 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDN----LGQVIRINLDI-VYICPVGI 77
           G I+ I      V+        + + ++ +G+  D       +V ++  +  V    +  
Sbjct: 20  GQITQIIGPVLDVSFPPGNLPNIYNSLIVKGQKDDRAFSVTCEVQQLLGNNTVRAVAMSA 79

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + ++ G  V + G    +       GR+ N LG+P+D    +   D +  I    P   
Sbjct: 80  TDGLTRGMKVINTGASLSVPVGKATLGRIFNVLGEPVDNLGPVD-TDTTFPIHRPAPAFT 138

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 139 QLDTNLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 198

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+ +AEYF
Sbjct: 199 GVGERTREGNDLYMEMKESGVINERNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYF 258

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +K
Sbjct: 259 RDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKK 316

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 317 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPE 376

Query: 365 WSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 377 IVGEQHYEIAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|55056880|emb|CAF22240.1| ATP synthase beta subunit [Enkianthus chinensis]
          Length = 475

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|149366225|ref|ZP_01888260.1| flagellum-specific ATP synthase [Yersinia pestis CA88-4125]
 gi|162420008|ref|YP_001606482.1| flagellum-specific ATP synthase [Yersinia pestis Angola]
 gi|165925906|ref|ZP_02221738.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165938730|ref|ZP_02227285.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010789|ref|ZP_02231687.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166210732|ref|ZP_02236767.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400998|ref|ZP_02306501.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420359|ref|ZP_02312112.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425827|ref|ZP_02317580.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|218928948|ref|YP_002346823.1| flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|229896273|ref|ZP_04511443.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Pestoides A]
 gi|229897210|ref|ZP_04512366.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229897937|ref|ZP_04513088.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902832|ref|ZP_04517949.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Nepal516]
 gi|270486618|ref|ZP_06203692.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294504006|ref|YP_003568068.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|115347559|emb|CAL20468.1| flagellum-specific ATP synthase [Yersinia pestis CO92]
 gi|149292638|gb|EDM42712.1| flagellum-specific ATP synthase [Yersinia pestis CA88-4125]
 gi|162352823|gb|ABX86771.1| flagellar protein export ATPase FliI [Yersinia pestis Angola]
 gi|165913344|gb|EDR31966.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922110|gb|EDR39287.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990133|gb|EDR42434.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207912|gb|EDR52392.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962054|gb|EDR58075.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049387|gb|EDR60795.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055226|gb|EDR65023.1| flagellar protein export ATPase FliI [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229680279|gb|EEO76378.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Nepal516]
 gi|229688978|gb|EEO81043.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693547|gb|EEO83596.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701196|gb|EEO89225.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Pestoides A]
 gi|262366055|gb|ACY62612.1| flagellum-specific ATP synthase [Yersinia pestis D182038]
 gi|270335122|gb|EFA45899.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27]
 gi|294354465|gb|ADE64806.1| flagellum-specific ATP synthase [Yersinia pestis Z176003]
 gi|320015434|gb|ADV99005.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 484

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 161/468 (34%), Positives = 242/468 (51%), Gaps = 34/468 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 17  LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 74

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF------------------ 93
            +   +V+  N   +++ P+   E I  G  V+      G                    
Sbjct: 75  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSF 134

Query: 94  ---RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
              ++       GRV++   KP+DG  +   G     +++     + R  + +    G+R
Sbjct: 135 ASKQLPLGPELLGRVLDGSAKPLDGLPAPETG-YRAPLITPPINPLQRTAIVQVLDVGVR 193

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ L
Sbjct: 194 TINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENIL 253

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G +   +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REI
Sbjct: 254 GAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREI 313

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R
Sbjct: 314 ALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSAR 373

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGH+VL+R LAE G YP +D  AS+SR        D    V     L+  ++  RD+
Sbjct: 374 AILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDL 433

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +G Y  G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 434 ISVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFDDACQHLKVL 481


>gi|315128169|ref|YP_004070172.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913]
 gi|315016682|gb|ADT70020.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913]
          Length = 461

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/406 (27%), Positives = 188/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G +  I      +      V        V  G  +    +V + +   +V    +G  + 
Sbjct: 4   GKVVQIIGAVVDIEFPQDSVPAVYDALKVTDGDLAGLTLEVQQQLGGGVVRTIALGTTDG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G   ++       GR++N LG+PID    +G+ D  M I    P    + 
Sbjct: 64  LRRGAAVANTGEAIQVPVGTKTLGRIMNVLGEPIDEAGPIGE-DERMSIHRAAPTYEEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 123 SSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 182

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  
Sbjct: 183 ERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  ++   G+IT++ +V V
Sbjct: 243 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIASTKT--GSITSIQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVS 374
             D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     +E   +  
Sbjct: 301 PADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDPQVIGEEHYGIAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 361 GVQTVLQRYKELKDIIAILGMDELSDED-KQLVSRARKIQRFLSQP 405


>gi|294341481|emb|CAZ89898.1| ATP synthase subunit beta, sodium ion specific (Na(+)-translocating
           ATPase subunit beta) [Thiomonas sp. 3As]
          Length = 471

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 189/413 (45%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-------VIRINLDIVYIC 73
            QG  +  I +V       +    + D +V    N+ +L +         +I   +V   
Sbjct: 6   AQGKIVQCIGAVIDIEFPRNAIPKVYDALVLADNNASSLAESGLTFEVQQQIGDGVVRTI 65

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +G  + +  G LV + G   ++       GR+++ LG+PID    +   +    I    
Sbjct: 66  AMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPIATEE-RRSIHQSA 124

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P   +        +TGI+VID+  P   G ++G+F G+G+GK+  +     +        
Sbjct: 125 PKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGL 184

Query: 191 -IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +
Sbjct: 185 SVFAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDE 244

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT
Sbjct: 245 GRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQERI--TSTKTGSIT 302

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 303 SIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGE 362

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      ++  ++ R++E RDI  I G          +AV +   I  FL Q 
Sbjct: 363 EHYSTTRAVQGILQRYKELRDIIAILGMDELS-PEDKQAVARARKIQRFLSQP 414


>gi|288799870|ref|ZP_06405329.1| ATP synthase F1, alpha subunit [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333118|gb|EFC71597.1| ATP synthase F1, alpha subunit [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 528

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 173/447 (38%), Gaps = 38/447 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  +D+  +    + G + ++      V  L +     + +  +      +G V+ 
Sbjct: 12  EVLLQQLKDFEDSAKFDEVGTVLTVGDGVARVYGL-RNAEASELLEFENG---TMGIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  E I  G  V        I  +    GRVIN LG+ IDG   +   +
Sbjct: 68  LEEDNVGCILLGSTEGIKEGQTVKRTHHIASIRVNDNMLGRVINPLGEAIDGKGDIDLTE 127

Query: 124 -LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M +  K P  + RQ V++  +TGI+ +D   P+  GQR  +      GK+ +     
Sbjct: 128 SFEMPLDRKAPGVIYRQPVKEPLQTGIKSVDSMIPIGRGQRELIIGDRQTGKTAIAVDTI 187

Query: 183 RSDCF-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
            +             I   +G++   V   +++         ++VV AT+ +S  ++  A
Sbjct: 188 LNQKSFYEQGKPVYCIYVAIGQKASTVATLVQNLKERGAMPYTIVVAATAADSAAMQYYA 247

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     I EYF  +G + L++ D +++ A + RE++           YP  VF    RLL
Sbjct: 248 PFAGAAIGEYFRDRGHSALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLL 307

Query: 295 ERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ER      +                     G++TA+  +     + +  I  +V SI DG
Sbjct: 308 ERAARINDQQEVAEQMNDLPECMKGHVKGGGSLTALPVIETQAGDVSAYIPTNVISITDG 367

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L   L  +G  P ++   SVSR+   A     KK+  +L   + ++ E         
Sbjct: 368 QIYLESDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDMAQYRELE---AFSK 424

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +   +D +    + +       L Q  
Sbjct: 425 FSSDMDAVTAMTLDRGRKNNQLLIQPQ 451


>gi|183206506|gb|ACC54451.1| ATP synthase beta subunit [Codonopsis viridis]
          Length = 488

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+ 
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMG 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|156530119|gb|ABU75156.1| AtpB [Castela erecta]
          Length = 488

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 185/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ+I +  ++        V   
Sbjct: 19  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQLINVTCEVQQLLGNNRVRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I  + 
Sbjct: 76  AMSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKRA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 135 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 313 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 372

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 373 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|119368032|dbj|BAF40520.1| ATP synthase beta subunit [Erythroxylum novocaledonicum]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVSFHPGKMPNIYNALVVKG--RDTGGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75328434|sp|Q85V31|ATPB_SCHME RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351923|emb|CAD48409.1| ATP synthase beta subunit [Schnarfia messeniaca]
          Length = 495

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718269|gb|AAK72872.1| ATP synthase beta subunit [Zelkova serrata]
          Length = 479

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVTFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+             +S
Sbjct: 127 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINXIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E+    G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVPALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 423


>gi|14717950|gb|AAK72717.1| ATP synthase beta subunit [Barbeya oleoides]
          Length = 486

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|91786238|ref|YP_547190.1| F0F1 ATP synthase subunit beta [Polaromonas sp. JS666]
 gi|123060395|sp|Q12GQ0|ATPB_POLSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91695463|gb|ABE42292.1| ATP synthase F1 subcomplex beta subunit [Polaromonas sp. JS666]
          Length = 467

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/413 (27%), Positives = 186/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            QG  +  I +V        Q   + D +  +G       Q  ++   IV    +G  + 
Sbjct: 4   AQGKIVQCIGAVVDVEFARDQMPKIYDALKMEGSALTLEVQ-QQLGDGIVRTIALGTSDG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V++ G    +       GR+++ LG PID    + +  L+  I  K P      
Sbjct: 63  LRRGNTVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQT-LTAPIHRKAPAYDELS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +TIAE F  +
Sbjct: 182 ERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDE 241

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 242 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSIT 299

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 359

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      ++   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 360 DHYATARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 411


>gi|22126362|ref|NP_669785.1| flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45441383|ref|NP_992922.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|21959346|gb|AAM86036.1|AE013851_8 flagellum-specific ATP synthase [Yersinia pestis KIM 10]
 gi|45436243|gb|AAS61799.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 492

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 161/468 (34%), Positives = 242/468 (51%), Gaps = 34/468 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 25  LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 82

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF------------------ 93
            +   +V+  N   +++ P+   E I  G  V+      G                    
Sbjct: 83  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSF 142

Query: 94  ---RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
              ++       GRV++   KP+DG  +   G     +++     + R  + +    G+R
Sbjct: 143 ASKQLPLGPELLGRVLDGSAKPLDGLPAPETG-YRAPLITPPINPLQRTAIVQVLDVGVR 201

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ L
Sbjct: 202 TINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENIL 261

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G +   +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REI
Sbjct: 262 GAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREI 321

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R
Sbjct: 322 ALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSAR 381

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGH+VL+R LAE G YP +D  AS+SR        D    V     L+  ++  RD+
Sbjct: 382 AILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDL 441

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +G Y  G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 442 ISVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFDDACQHLKVL 489


>gi|25808435|gb|AAN74344.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDVAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|552857|gb|AAA84588.1| atpB gene product [Oryza sativa]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 180/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVV----HQGKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT     +       VV     +GK  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTEGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVIKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|313576713|gb|ADR66864.1| ATP synthase beta subunit [Ternstroemia sp. WH-2010]
          Length = 479

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|192359136|ref|YP_001984260.1| F0F1 ATP synthase subunit beta [Cellvibrio japonicus Ueda107]
 gi|226740176|sp|B3PIS7|ATPB_CELJU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190685301|gb|ACE82979.1| ATP synthase F1, beta subunit [Cellvibrio japonicus Ueda107]
          Length = 459

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 189/408 (46%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V       V+ +G  +  + Q +     +V    +G  
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDAVPKVYDALVISEGNLTLEVQQQLG--DGVVRTIALGSS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V +     ++       GR+++ LG PID    +G+ +  M+I    P    
Sbjct: 59  EGLRRGLSVTNTNEPIKVPVGTQTLGRIMDVLGNPIDEAGPIGEQE-RMQIHRAAPAYEE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               E+  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + 
Sbjct: 118 LAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 178 VGERTREGNDFYHEMKDSNVVDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 238 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKIGSITSVQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  D      +   +
Sbjct: 296 YVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDSTSRQLDPMVIGNEHYLV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 356 ARGVQSVLQRYKELKDIIAILGMDELSEED-KLTVNRARKIERFLSQP 402


>gi|118917350|dbj|BAF40461.1| ATP synthase beta subunit [Ricinus communis]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGGPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75336618|sp|Q9MU26|ATPB_NYMOD RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688029|emb|CAB89719.1| ATP synthase beta subunit [Nymphaea odorata]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V   +  +       VV      D  GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLXVAFSTGKMPNIYNSLVV---XGRDTAGQEINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|4995757|emb|CAB44246.1| H(+)-transporting ATP synthase [Pachira aquatica]
          Length = 487

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|14718167|gb|AAK72822.1| ATP synthase beta subunit [Pelliciera rhizophorae]
          Length = 486

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|183206596|gb|ACC54496.1| ATP synthase beta subunit [Prismatocarpus diffusus]
          Length = 488

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYKEMKESGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|187479684|ref|YP_787709.1| F0F1 ATP synthase subunit beta [Bordetella avium 197N]
 gi|118573510|sp|Q2KU36|ATPB_BORA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115424271|emb|CAJ50824.1| ATP synthase beta chain [Bordetella avium 197N]
          Length = 466

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   D
Sbjct: 52  LGDGVVRTIALGSSDGLRRGMPVSRTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIN-AD 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 EKRAIHQHAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 231 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSR 348

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G          +AV +   I  FL 
Sbjct: 349 QLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILGMDELS-PEDKQAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|323715492|gb|ADY04814.1| ATP synthase beta subunit [Platycrater arguta]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|254483182|ref|ZP_05096415.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2148]
 gi|214036553|gb|EEB77227.1| ATP synthase F1, beta subunit [marine gamma proteobacterium
           HTCC2148]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/414 (27%), Positives = 191/414 (46%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V    + V  + D +V   K+     Q  ++   +V    +G  E
Sbjct: 25  MSSGRIVQIIGAVIDVEFSREDVPQVYDALVVPEKDLTLEVQ-QQLGDGVVRAIAMGSSE 83

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S G  V + G    +       GR+++ LG PID    +G+ +    I  K P     
Sbjct: 84  GVSRGLAVENTGAPISVPVGIETLGRIMDVLGNPIDECGPIGEQE-RAAIHRKAPTYEEL 142

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 143 SASDELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGV 202

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +    N          K  +V    +E P  R    LT +T+AE F  
Sbjct: 203 GERTREGNDFYFEMQESNVVDVENFSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 262

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 263 EGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKVGSI 320

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 321 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAARGIYPAVDPLDSTSRQLDPLIIG 380

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            D  +    +  ++ R++E +DI  I G     +    ++V++   I  FL Q 
Sbjct: 381 NDHYETARGVQSVLQRYKELKDIIAILGMDELSEED-KQSVNRARKIERFLSQP 433


>gi|139522706|gb|ABO77767.1| ATP synthase beta subunit [Burmeistera crassifolia]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|156530109|gb|ABU75151.1| AtpB [Brucea guineensis]
          Length = 495

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|30351925|emb|CAD48410.1| ATP synthase beta subunit [Hyacinthella heldreichii]
          Length = 495

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6689000|emb|CAB65354.1| ATP synthase beta subunit [Proboscidea louisianica]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRNAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14717924|gb|AAK72705.1| ATP synthase beta subunit [Agave ghiesbreghtii]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G   R+       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAALRVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|7525040|ref|NP_051066.1| ATP synthase CF1 beta subunit [Arabidopsis thaliana]
 gi|6686269|sp|P19366|ATPB_ARATH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5881701|dbj|BAA84392.1| ATPase beta subunit [Arabidopsis thaliana]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|22128003|ref|NP_671426.1| F0F1 ATP synthase subunit beta [Yersinia pestis KIM 10]
 gi|45443751|ref|NP_995290.1| F0F1 ATP synthase subunit beta [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51598251|ref|YP_072442.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis IP
           32953]
 gi|108810156|ref|YP_654072.1| F0F1 ATP synthase subunit beta [Yersinia pestis Antiqua]
 gi|108814138|ref|YP_649905.1| F0F1 ATP synthase subunit beta [Yersinia pestis Nepal516]
 gi|145601152|ref|YP_001165228.1| F0F1 ATP synthase subunit beta [Yersinia pestis Pestoides F]
 gi|150260945|ref|ZP_01917673.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125]
 gi|153948511|ref|YP_001403118.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis IP
           31758]
 gi|162421072|ref|YP_001608472.1| F0F1 ATP synthase subunit beta [Yersinia pestis Angola]
 gi|165926118|ref|ZP_02221950.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939967|ref|ZP_02228504.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009572|ref|ZP_02230470.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213362|ref|ZP_02239397.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401612|ref|ZP_02307106.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422841|ref|ZP_02314594.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425526|ref|ZP_02317279.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170026430|ref|YP_001722935.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis YPIII]
 gi|186897468|ref|YP_001874580.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis PB1/+]
 gi|218931097|ref|YP_002348972.1| F0F1 ATP synthase subunit beta [Yersinia pestis CO92]
 gi|229839830|ref|ZP_04459989.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229841915|ref|ZP_04462071.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229896792|ref|ZP_04511955.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Pestoides A]
 gi|229904681|ref|ZP_04519792.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Nepal516]
 gi|270488391|ref|ZP_06205465.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27]
 gi|81825677|sp|Q663Q8|ATPB_YERPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573782|sp|Q1C095|ATPB_YERPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122979850|sp|Q1CCH5|ATPB_YERPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123776436|sp|Q7CFM8|ATPB_YERPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222427|sp|A4TSJ3|ATPB_YERPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990376|sp|A7FPE0|ATPB_YERP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740695|sp|B2K847|ATPB_YERPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740696|sp|A9R5T9|ATPB_YERPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740697|sp|B1JRN2|ATPB_YERPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21961151|gb|AAM87677.1|AE014015_2 membrane-bound ATP synthase, F1 sector, beta-subunit [Yersinia
           pestis KIM 10]
 gi|45438621|gb|AAS64167.1| ATP synthase beta subunit protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51591533|emb|CAH23205.1| ATP synthase beta subunit protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108777786|gb|ABG20305.1| ATP synthase beta subunit protein [Yersinia pestis Nepal516]
 gi|108782069|gb|ABG16127.1| ATP synthase beta subunit protein [Yersinia pestis Antiqua]
 gi|115349708|emb|CAL22689.1| ATP synthase beta subunit protein [Yersinia pestis CO92]
 gi|145212848|gb|ABP42255.1| ATP synthase beta subunit protein [Yersinia pestis Pestoides F]
 gi|149290353|gb|EDM40430.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125]
 gi|152960006|gb|ABS47467.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis IP
           31758]
 gi|162353887|gb|ABX87835.1| ATP synthase F1, beta subunit [Yersinia pestis Angola]
 gi|165912093|gb|EDR30733.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921978|gb|EDR39155.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991494|gb|EDR43795.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205660|gb|EDR50140.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958233|gb|EDR55254.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167048994|gb|EDR60402.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055540|gb|EDR65333.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752964|gb|ACA70482.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis YPIII]
 gi|186700494|gb|ACC91123.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis PB1/+]
 gi|229678799|gb|EEO74904.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Nepal516]
 gi|229691254|gb|EEO83307.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229696196|gb|EEO86243.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700230|gb|EEO88266.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis Pestoides A]
 gi|270336895|gb|EFA47672.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27]
 gi|320017455|gb|ADW01027.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 460

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  +G     + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVEGTTEKLVLEVQQQLGGGVVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V +      +       GR++N LG+PID    +G+ +    I  + P    
Sbjct: 61  DGLSRGLKVTNLEHPIEVPVGKATLGRIMNVLGEPIDMKGPIGEEE-RWAIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               +   +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVSRARKIQRFLSQP 404


>gi|313576707|gb|ADR66861.1| ATP synthase beta subunit [Ternstroemia gymnanthera]
          Length = 477

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|309322455|ref|YP_003933968.1| ATP synthase CF1 beta subunit [Eucalyptus grandis]
 gi|308223289|gb|ADO23597.1| ATP synthase CF1 beta subunit [Eucalyptus grandis]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|30351919|emb|CAD48407.1| ATP synthase beta subunit [Nectaroscilla hyacinthoides]
          Length = 493

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7708628|emb|CAB89991.1| ATP synthase beta subunit [Saintpaulia ionantha]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|88811293|ref|ZP_01126549.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231]
 gi|88791832|gb|EAR22943.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231]
          Length = 465

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/412 (26%), Positives = 189/412 (45%), Gaps = 21/412 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVI-RINLDIVYICPVGIGEEI 81
           G +  I      V    + V  + D ++  G+      +V  +I   +V    +G  + +
Sbjct: 4   GNVVQIIGAVVDVEFPYEAVPKVYDALLIDGQELTL--EVQHQIGGGVVRTIAMGSTDGL 61

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V + G    +       GR+++ LG+P+D    +G  + +M I  + P       
Sbjct: 62  RRGVKVSNTGAPISVPVGVKTLGRIMDVLGRPVDERGPVGAKE-TMSIHRQAPAFDELAA 120

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VGE
Sbjct: 121 STELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMLELINNIAKEHGGLSVFAGVGE 180

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +F  +               K  +V    +E P  R    L+ +T+AEYF  +G
Sbjct: 181 RTREGNDFYHEMAESGVIKLDDLPESKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDEG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+
Sbjct: 241 RDVLLFIDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +    LD  +VL+R +AE G YP VDPL S SR  D      +
Sbjct: 299 IQAVYVPADDLTDPSPATTFGHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +   + R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 359 HYQVARQVQGTLQRYKELKDIIAILGMDELSDED-KLIVARARKIQRFLSQP 409


>gi|86157817|ref|YP_464602.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774328|gb|ABC81165.1| type III secretion system ATPase, FliI/YscN [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 452

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 233/419 (55%), Gaps = 8/419 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
            G +  + +    V  L   V +G    +H    +  L +VI        + P+   + +
Sbjct: 22  TGTV--VRAAGLLVEALLPQVPVGTACEIHARDGAVVLAEVIGFQGGTARLMPLSGIQGV 79

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G +V       RI       GRV++A  +P+DG   +        + +  PPA++R+R
Sbjct: 80  AEGCVVVPRASADRIPVDEALLGRVVDASLRPVDG-GPVPILRQRTALHAAPPPALSRRR 138

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           VE+    GIR +D    +  GQR+ V AG G+GKS LL M ARS   D V++ LVGERGR
Sbjct: 139 VERPVPLGIRAVDACLTVGEGQRVAVMAGPGVGKSVLLGMLARSATADVVVVGLVGERGR 198

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EVREF+E  LG  L ++VVVVATSD SP+ R  A + A  +AE+F  +G  VLL++DS++
Sbjct: 199 EVREFVERDLGPGLARAVVVVATSDASPLERLRAAMAATAVAEWFRGRGRRVLLLVDSLS 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R A + REI   +GE P  RGYP S F+ LPRL+ER G      G+ITA  +VL +GD+H
Sbjct: 259 RVAQAQREIGLAAGEPPTTRGYPPSAFAILPRLVERAGNDAGP-GSITAFYTVLAEGDDH 317

Query: 321 -NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             DPIAD+ R+ LDGH+VL+R LAE G +P +D LASVSR+ +     + + L      +
Sbjct: 318 AGDPIADAARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPPEHRALAREAREV 377

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           +    E  D+  +G Y  G +  +D+A+  +  +  FL+Q P++ +   +    + + L
Sbjct: 378 LSAHREAADLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAERTPLPEALDRLARLL 436


>gi|24940172|emb|CAD43370.1| ATP synthase beta subunit [Cynoglossum officinale]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|150035729|gb|ABR67210.1| ATP synthase beta subunit [Pharus lappulaceus]
          Length = 484

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/423 (26%), Positives = 180/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I  I      VT     +       VV   K+ D  G+ I +  ++        V 
Sbjct: 6   STGRIDQIIGPVLDVTFPPGKLPYIYNALVV---KSRDTAGKQINVTCEVQQLLGNNRVR 62

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 63  AVAMSATDGLMRGMEVIDTGASLXVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHR 121

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 122 SAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 181

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 182 GVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTAL 241

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 242 TMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 300

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 301 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 359

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 360 TMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 418

Query: 418 KQS 420
            Q 
Sbjct: 419 SQP 421


>gi|56675813|emb|CAC60317.2| ATP synthase beta subunit [Villarsia capitata]
          Length = 479

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGEPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLKRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|9799484|gb|AAF98992.1| ATP synthase beta subunit [Paeonia brownii]
          Length = 490

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G+  D++GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DSIGQPINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|223939532|ref|ZP_03631408.1| ATP synthase F1, alpha subunit [bacterium Ellin514]
 gi|223891804|gb|EEF58289.1| ATP synthase F1, alpha subunit [bacterium Ellin514]
          Length = 510

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 94/458 (20%), Positives = 176/458 (38%), Gaps = 28/458 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   L+ +         ++  Q  G +  I      +  L+    L + +      +  +
Sbjct: 1   MSNLLQEIEAQISGVKTSVAKQNVGIVREIGDGVAKIEGLTD-AMLNEMLDF---GNGIV 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +  + V    +G    I  G  V   G+  ++       GRV+N+LG+P+DG   
Sbjct: 57  GLALNLEENEVGAIILGEYTSIREGQEVRTTGKLLQVPVGKGLLGRVVNSLGQPVDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   D+S  +    P  + R+ V +  +TGI  +D   P+  GQR  +      GK+T+ 
Sbjct: 117 I-TSDVSYPVEKIAPGIIKRRSVSQPVQTGIMAVDAMIPIGRGQRELIIGDRSTGKTTIG 175

Query: 179 SMFARSDCFD---------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVA 222
                +                     I   +G++   +   I           +++VVA
Sbjct: 176 VDTMINQARINKAAEAAGDKSFRPIYNIYVAIGQKQSNIARVINVLEEAGAMPYTIIVVA 235

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + +S   + +AP     + E+F   G + L+I D +++ A + R+++           Y
Sbjct: 236 AASDSATNQYLAPFAGAAMGEWFMDNGMDALIIYDDLSKHAVAYRQVSLVLKRPSGREAY 295

Query: 283 PTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     ++ GN   TA+  +     + +  I  +V SI DG I L  
Sbjct: 296 PGDVFYLHSRLLERSARVSEKYGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLET 355

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G  P +    SVSR+   A     K++   +   + +F E   +     +   +D
Sbjct: 356 DLFYQGVRPAISVGLSVSRVGSAAQIKAMKQVAGRIKGDLAQFRE---LAAFAQFGSDLD 412

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
                 + +   I +  KQ   +  + +V       +Q
Sbjct: 413 ARTQAQLERGKRIVEVFKQPQYNPIAVEVQAATLWTVQ 450


>gi|156530145|gb|ABU75169.1| AtpB [Nothospondias staudtii]
          Length = 495

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTRSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|24940200|emb|CAD43381.1| ATP synthase beta subunit [Myosotis arvensis]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62085192|gb|AAX63000.1| ATP synthase beta subunit [Ricinus communis]
          Length = 482

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGGPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|25808501|gb|AAN74377.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGISVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|25808437|gb|AAN74345.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPVIMDRKSVHEPLQTGIKAIDALVPVGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L++ D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIVYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|317182625|dbj|BAJ60409.1| flagellum-specific ATP synthase [Helicobacter pylori F57]
          Length = 434

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|305671631|gb|ADM63125.1| ATP synthase beta subunit [Lonicera japonica]
 gi|305671699|gb|ADM63159.1| ATP synthase beta subunit [Leycesteria formosa]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPGIVGKNHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|283768661|ref|ZP_06341573.1| ATP synthase F1, beta subunit [Bulleidia extructa W1219]
 gi|283105053|gb|EFC06425.1| ATP synthase F1, beta subunit [Bulleidia extructa W1219]
          Length = 462

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 17/410 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDIVYICPVGI 77
           + G I  +      +   S+++      +H     G  +  + Q +    D+V    +  
Sbjct: 3   EKGKIVQVIGPVIDIQFASEHLPAIRNAIHIPYQDGFMTAEVAQHVG--DDVVRCIAMSS 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G   ++       GR+ N LG+ IDG  S+ + D  + I  + P   
Sbjct: 61  TDGLVRGLECLDTGSPIQVPVGDEVLGRMFNVLGETIDGLGSI-QTDKRLPIHREAPSFS 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            ++      +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     +++
Sbjct: 120 EQRTTSDILETGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLMQELIHNIAIEHGGRSVVA 179

Query: 194 LVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +     + K +V+     +ESP  R    LTA+T+AEYF  +    
Sbjct: 180 GVGERTREGNDMYHEMKESGVLKNTVLTYGQMNESPGARMRVALTALTMAEYFRDEERQE 239

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT+V 
Sbjct: 240 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTDKGSITSVQ 297

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           ++ V  D+  DP   +  S LD  +VL+RS+A  G YP VDPL S SR+ D      +  
Sbjct: 298 AIYVPADDLTDPAPATTFSHLDARLVLDRSIAALGIYPAVDPLGSSSRMLDPLVIGEEHY 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ R++E +DI  I G     +    K V +   + +FL Q 
Sbjct: 358 QVARQVQEILQRYKELQDIIAILGMEELSEED-KKVVARARRVRNFLSQP 406


>gi|194267337|gb|ACF35655.1| ATP synthase beta subunit [Roupala montana]
          Length = 497

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|85712589|ref|ZP_01043636.1| F0F1-type ATP synthase, alpha subunit [Idiomarina baltica OS145]
 gi|85693580|gb|EAQ31531.1| F0F1-type ATP synthase, alpha subunit [Idiomarina baltica OS145]
          Length = 513

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 98/443 (22%), Positives = 183/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +A+L ++  +   V       G I S+      V  L+  +  G+ +   G  
Sbjct: 1   MQLNSNEIAELIKERIEKFEVTSEARNEGTIMSVQDGIIRVHGLADCL-QGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLQEGVKVKSTGRILEVPVGNKLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + +    +    P  ++RQ V++  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGPI-EAEAYEPVEKIAPGVIDRQSVDEPVQTGYKSIDSMIPVGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  +   K +   +G++   +   +         + ++VV A++ ES  L+
Sbjct: 176 TALAVDAIINQKNSGIKCVYVAIGQKNSTISAVVRKLEEHGALENTIVVAASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            ++  +  T+ E+F  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLSAYSGCTMGEFFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEKHTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETDLFNSGIRPAVNAGISVSRVGGAAQTKIIKKLGGGIRLALAQYRE---LAAFAQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDESTRAQLEHGQRVTELMKQKQ 435


>gi|114330304|ref|YP_746526.1| F0F1 ATP synthase subunit beta [Nitrosomonas eutropha C91]
 gi|122314650|sp|Q0AJB0|ATPB1_NITEC RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|114307318|gb|ABI58561.1| ATP synthase F1 subcomplex beta subunit [Nitrosomonas eutropha C91]
          Length = 460

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 185/407 (45%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
              G I         V   S+ +  + D +V +G       Q  ++   +V    +G  +
Sbjct: 2   SHQGKIVQCIGAVIDVEFASEGIPKVYDALVMEGSELTLEVQ-QQLGDGVVRTIALGSSD 60

Query: 80  EISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G +V +   +  +       GR+++ LG+PID    +G  +  M I    P     
Sbjct: 61  GLRRGMMVTNTQKQISVPVGTKTLGRIMDVLGRPIDEMGEIG-AESFMPIHRTAPAFDEL 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 SASTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 180 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLF 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  S+   G+IT++ +V 
Sbjct: 240 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSSKT--GSITSIQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      D     
Sbjct: 298 VPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEDHYNTA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 REVQQTLQRYKELRDIIAILGMDELS-PEDKLSVSRARKIQRFLSQP 403


>gi|317179598|dbj|BAJ57386.1| flagellum-specific ATP synthase [Helicobacter pylori F30]
          Length = 434

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|317013186|gb|ADU83794.1| flagellum-specific ATP synthase [Helicobacter pylori Lithuania75]
          Length = 434

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 232/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   S+ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID   +L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|323345604|ref|ZP_08085827.1| ATP synthase F1 sector alpha subunit [Prevotella oralis ATCC 33269]
 gi|323093718|gb|EFZ36296.1| ATP synthase F1 sector alpha subunit [Prevotella oralis ATCC 33269]
          Length = 528

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 92/444 (20%), Positives = 170/444 (38%), Gaps = 37/444 (8%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L +L +   +    + G + +++     +  L +     + +  +      +  V+ +  
Sbjct: 15  LQRLRQVNEREHFEEVGTVLTVSDGVARIYGL-RNAEANELLEFENG---TMAIVMNLEE 70

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LS 125
           D V    +G    I  G  V    R   I  +  + GRV+N LG+ IDG   +   D   
Sbjct: 71  DNVGCVLLGSTTGIKEGQSVKRTHRIASIRVNDNFLGRVVNPLGQAIDGSGDIDLTDAFE 130

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M +  K P  + RQ V++  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 131 MPLDRKAPGVIYRQPVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDTIINQ 190

Query: 186 CF-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
                       I   +G++   V   ++          +++V AT+ +   ++  AP  
Sbjct: 191 KSFYEAGKPVYCIYVAIGQKASTVATLVQTLKEHGAMPYTIIVSATAADPAAMQYYAPFA 250

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              I EYF  +G + L++ D +++ A + RE++           YP  VF    RLLER 
Sbjct: 251 GAAIGEYFRDRGYSALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERA 310

Query: 298 GPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
                +                     G++TA+  +     + +  I  +V SI DG I 
Sbjct: 311 ARINDQQEVAEQMNDLPECMKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIY 370

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L  +L  EG  P ++   SVSR+   A     KK+  +L     ++ E         +  
Sbjct: 371 LETNLFNEGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKFSS 427

Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421
            +D +    + +       L Q  
Sbjct: 428 DMDPVTAMTIDRGRKNNQLLIQPQ 451


>gi|258622519|ref|ZP_05717541.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
 gi|258585219|gb|EEW09946.1| flagellum-specific ATP synthase [Vibrio mimicus VM573]
          Length = 455

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 144/427 (33%), Positives = 233/427 (54%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  +    G +  +  +      +     L    + +    D +  QV+  +  + Y+ P
Sbjct: 29  SIPVARVTGRLVKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVVGFDHTVAYLMP 86

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V    G   +  S  W GRV+N LG+ +D    L +G+  + + SK  
Sbjct: 87  IRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPVLNEGE-RVSLESKPI 145

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  ++   D +++ 
Sbjct: 146 NPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVLMGMITQNTDADVIVVG 205

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +GERGREVREFI         KK++++ A +DESP++R  A L    + EYF  KG +V
Sbjct: 206 FIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATLLCHRVGEYFRDKGQDV 265

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G SE + G++TA+ +
Sbjct: 266 LLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLERAGNSENQDGSLTAIYT 325

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DP+ DS R+ILDG++VL+R LAE+G YP +D  AS+SR             
Sbjct: 326 VLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINASLSRCMMSCTQPTHSDT 385

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQ 431
            +        + + +++  +GGY+PG D  LD+++   P +  +L+Q+ +++        
Sbjct: 386 ANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAYLQQAANEVVDYSTSLA 445

Query: 432 EITKKLQ 438
           ++ +  Q
Sbjct: 446 DLAQIFQ 452


>gi|224830570|gb|ACN66380.1| ATP synthase beta chain [Pycnarrhena celebica]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPKIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +G    +  I    P
Sbjct: 73  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVG-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTLQRYKELQDIIXILGLDELSEED-RLTVARARXIERFLSQP 428


>gi|139522541|gb|ABO77657.1| ATP synthase beta subunit [Lobelia polyphylla]
 gi|139522544|gb|ABO77659.1| ATP synthase beta subunit [Lobelia excelsa]
 gi|139522547|gb|ABO77661.1| ATP synthase beta subunit [Lobelia tupa]
 gi|139522550|gb|ABO77663.1| ATP synthase beta subunit [Lobelia bridgesii]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|4995788|emb|CAB44264.1| H(+)-transporting ATP synthase [Rhopalocarpus sp. Chase 906]
          Length = 488

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|14718046|gb|AAK72764.1| ATP synthase beta subunit [Eucryphia lucida]
          Length = 482

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850980|gb|AAC72182.1| ATP synthase beta subunit [Lomatia myricoides]
          Length = 490

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      +     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDIAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|302669540|ref|YP_003829500.1| ATP synthase F1 beta subunit AtpD1 [Butyrivibrio proteoclasticus
           B316]
 gi|302394013|gb|ADL32918.1| ATP synthase F1 beta subunit AtpD1 [Butyrivibrio proteoclasticus
           B316]
          Length = 464

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 194/421 (46%), Gaps = 16/421 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           + G +  +T     +      +  L + +     +   + +V  ++  D+V    +   +
Sbjct: 5   RVGKVIQVTGPVLDIRYKEGELPDLHNAIEIMIDDRKLIAEVAQQVGDDVVRCVAMSSTD 64

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G D V       +       GR+ N LG P+D     G  +    I    P   ++
Sbjct: 65  GLVRGADAVDTGSPITVPVGDECLGRIFNLLGDPVDNGPDPGAKE-RWPIHRPAPAYEDQ 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       IS+   V
Sbjct: 124 VPATEIFETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGISVFTGV 183

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVL 253
           GER RE  +   +     +  K+ +V    +E P  R    L+ +T+AEYF   K  +VL
Sbjct: 184 GERTREGNDLYGEMKESGVLDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDVKNQDVL 243

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V
Sbjct: 244 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAV 301

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+        +  ++
Sbjct: 302 YVPADDLTDPAPATTFTHLDATTVLSRDIASKGIYPAVDPLDSTSRILSPDIVGKEHYEV 361

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
              +  ++ R+ E +DI  I G     +      V++   + +FL QS    S  + F  
Sbjct: 362 AKGVQQVLQRYRELQDIIAIMGMDELSEED-KLTVYRARKVQNFLSQS---FSVAEQFTG 417

Query: 433 I 433
           +
Sbjct: 418 L 418


>gi|290490152|gb|ADD31483.1| ATP synthase CF1 beta subunit protein [Lonicera japonica]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGKNHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|258624658|ref|ZP_05719593.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
 gi|258583050|gb|EEW07864.1| flagellum-specific ATP synthase [Vibrio mimicus VM603]
          Length = 449

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 144/427 (33%), Positives = 233/427 (54%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  +    G +  +  +      +     L    + +    D +  QV+  +  + Y+ P
Sbjct: 23  SIPVARVTGRLVKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVVGFDHTVAYLMP 80

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V    G   +  S  W GRV+N LG+ +D    L +G+  + + SK  
Sbjct: 81  IRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPVLNEGE-RVSLESKPI 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  ++   D +++ 
Sbjct: 140 NPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVLMGMITQNTDADVIVVG 199

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +GERGREVREFI         KK++++ A +DESP++R  A L    + EYF  KG +V
Sbjct: 200 FIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATLLCHRVGEYFRDKGQDV 259

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G SE + G++TA+ +
Sbjct: 260 LLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLERAGNSENQDGSLTAIYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DP+ DS R+ILDG++VL+R LAE+G YP +D  AS+SR             
Sbjct: 320 VLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINASLSRCMMSCTQPTHSDT 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQ 431
            +        + + +++  +GGY+PG D  LD+++   P +  +L+Q+ +++        
Sbjct: 380 ANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAYLQQAANEVVDYSTSLA 439

Query: 432 EITKKLQ 438
           ++ +  Q
Sbjct: 440 DLAQIFQ 446


>gi|186886215|gb|ACC93510.1| ATPase F1 alpha subunit [Luzula elegans]
          Length = 357

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 124 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQIMSEANALDYSVLVAAT 183

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 184 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 243

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 244 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 303

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K+   SL   + ++ E       G
Sbjct: 304 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQACGSLKLELAQYREVAAFAQFG 355


>gi|156530097|gb|ABU75145.1| AtpB [Ailanthus altissima var. tanakai]
          Length = 490

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|30351897|emb|CAD48101.1| ATP synthase beta subunit [Schizocarphus nervosus]
          Length = 495

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|30351907|emb|CAD48106.1| ATP synthase beta subunit [Daubenya aurea]
          Length = 494

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|6689233|emb|CAB65417.1| ATP synthase beta subunit [Stylidium graminifolium]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  G+ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|323715494|gb|ADY04815.1| ATP synthase beta subunit [Schizophragma hydrangeoides]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+ TP   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|294055639|ref|YP_003549297.1| ATP synthase F1, alpha subunit [Coraliomargarita akajimensis DSM
           45221]
 gi|293614972|gb|ADE55127.1| ATP synthase F1, alpha subunit [Coraliomargarita akajimensis DSM
           45221]
          Length = 514

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 96/461 (20%), Positives = 178/461 (38%), Gaps = 31/461 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   +E + +    +    V    G I +I      +  LS  V   + +          
Sbjct: 1   MSSIVEQIEKEIASFEAGAVKTNTGKIVTIADGVAKLEGLS-GVMYNEMIDF---GDGVY 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V    +G   ++  GD     G+   +       GRV++A+G P+DG   
Sbjct: 57  GLALNLEEDEVGCVILGDYSKLKEGDEAKTTGKLLSVPVGMGLLGRVVDAIGNPVDGKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   D S  +    P  + R+ V++  +TGI  ID   P+  GQR  +      GK+T+ 
Sbjct: 117 IN-SDESYPVDQIAPGIIPRKSVDQPMQTGIMAIDSMIPIGRGQRELIIGDRATGKTTIA 175

Query: 179 SMFARSDCF------------------DKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
                +                        I   VG++   +   I           +++
Sbjct: 176 IDTIINQAKINNQHRKEDGSFEEGFRPVYSIYVAVGQKNSNIARTINVLEKAGAMEYTII 235

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           V+A + ++P  + +AP +  ++ E+F + G + L++ D +++ A + R+I+         
Sbjct: 236 VMAPAADNPANQYIAPFSGASMGEFFMNNGMDALIVYDDLSKQAVAYRQISLILKRPAGR 295

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  VF    RLLER     ++ GN   TA+  +     + +  I  +V SI DG + 
Sbjct: 296 EAYPGDVFYLHSRLLERSARVNEDNGNGSLTALPIIETQAGDVSAYIPTNVISITDGQVF 355

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L  +G  P V    SVSR+   A     KK+   +   + +F E         +  
Sbjct: 356 LETDLFNQGIRPAVSVGLSVSRVGSAAQIKAIKKVAGKVKLQLAQFREL---AAFAQFGS 412

Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +D      + +   + +  KQ+  +    +V   +   +Q
Sbjct: 413 DLDAKTKAQLERGARVVELFKQTAFNPIPVEVQTSLIWSVQ 453


>gi|257852986|gb|ACV71504.1| ATP synthase beta subunit [Hua gabonii]
          Length = 491

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 119/443 (26%), Positives = 192/443 (43%), Gaps = 32/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNL 59
           M+ N  TL+       K      G I+ I      VT    +   + + +V +G   D +
Sbjct: 1   MRINPTTLSSGVSALEKK---NLGRIAQIIGPVLDVTFPRGKMPNIYNALVVKG--RDTV 55

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I +  ++        V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 56  GQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGVPLSVPVGEATLGRIFNVLG 115

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 116 EPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 174

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +  ++               K  +
Sbjct: 175 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNFAESKVAL 234

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 235 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 294

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 295 AVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDPAPATTFAHLDATTVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +  +    D   K    +   + R++E +DI  + G   
Sbjct: 353 SRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKTAQRVKQTLQRYKELQDIITVLGLDE 412

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 413 LSEED-RLTVERARKIERFLSQP 434


>gi|183206570|gb|ACC54483.1| ATP synthase beta subunit [Jasione heldreichii]
          Length = 488

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D LGQ I +  ++        V    
Sbjct: 11  GRIGQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYKEMKESGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|217032110|ref|ZP_03437610.1| hypothetical protein HPB128_16g70 [Helicobacter pylori B128]
 gi|216946258|gb|EEC24866.1| hypothetical protein HPB128_16g70 [Helicobacter pylori B128]
          Length = 434

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 159/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|66276265|gb|AAY44147.1| ATP synthase beta subunit [Coriaria nepalensis]
          Length = 488

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 11  SGRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAV 68

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 69  AMSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 127

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 128 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 187

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 188 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 247

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 248 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 305

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 306 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 366 LQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQ 424

Query: 420 S 420
            
Sbjct: 425 P 425


>gi|238788330|ref|ZP_04632124.1| Flagellum-specific ATP synthase [Yersinia frederiksenii ATCC 33641]
 gi|238723576|gb|EEQ15222.1| Flagellum-specific ATP synthase [Yersinia frederiksenii ATCC 33641]
          Length = 454

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 161/449 (35%), Positives = 241/449 (53%), Gaps = 21/449 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNS 56
           M K  E ++Q         + + G ++  T +    T L   + LG   + +    G+  
Sbjct: 12  MDKFEERISQ------STTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDNGEVQ 63

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINAL 109
           +   +V+  N   +++ P+   E I  G  V+     G      ++       GRV++  
Sbjct: 64  EVESEVVGFNGQRLFLMPLEEVEGIVPGARVYARVTTGGASASKQLPLGPELLGRVLDGS 123

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
            KP+DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAG
Sbjct: 124 AKPLDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAG 182

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
           SG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP
Sbjct: 183 SGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSP 242

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF+
Sbjct: 243 LLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFA 302

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G Y
Sbjct: 303 KLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHY 362

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+ 
Sbjct: 363 PAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIA 422

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             P +  FL+Q   + SS +   +  K L
Sbjct: 423 LYPQMEIFLQQGMFERSSYEDACQHLKSL 451


>gi|300916399|ref|ZP_07133139.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1]
 gi|300416303|gb|EFJ99613.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1]
          Length = 460

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNCNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|299140477|ref|ZP_07033615.1| ATP synthase F1, alpha subunit [Prevotella oris C735]
 gi|298577443|gb|EFI49311.1| ATP synthase F1, alpha subunit [Prevotella oris C735]
          Length = 528

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 91/430 (21%), Positives = 166/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L + V   + +  +      +  V+ +  D +    +G    I
Sbjct: 29  EVGTVLTVADGVARVYGL-RNVEASELLEFENG---TMAIVMNLEEDNIGCVLLGPTAGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +   D   M +  K P  + RQ
Sbjct: 85  KEGQTVKRTHRIASIRVNDNFLGRVVNPLGQAIDGLGDIDLTDAFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKSFYEAGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   ++          S++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVAALVQTLKEHGALPYSIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGYS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINNQQEIAEQMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L  +L  +G  P +
Sbjct: 325 DLPACMKGYVCGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETNLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQIKSMKKVAGTLKLDMAQYRELE---AFSKFSSDMDAVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|157144366|ref|YP_001451685.1| F0F1 ATP synthase subunit beta [Citrobacter koseri ATCC BAA-895]
 gi|166201697|sp|A8ACN6|ATPB_CITK8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157081571|gb|ABV11249.1| hypothetical protein CKO_00070 [Citrobacter koseri ATCC BAA-895]
          Length = 460

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNEHLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|152972641|ref|YP_001337787.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238897239|ref|YP_002921987.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae NTUH-K2044]
 gi|262040363|ref|ZP_06013609.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330005181|ref|ZP_08305143.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3]
 gi|166201714|sp|A6TG36|ATPB_KLEP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150957490|gb|ABR79520.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238549569|dbj|BAH65920.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042304|gb|EEW43329.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328536387|gb|EGF62746.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3]
          Length = 460

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYEALEVQNGNEVLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|50233978|ref|YP_052756.1| ATP synthase CF1 beta subunit [Oryza nivara]
 gi|68565033|sp|Q6ENG7|ATPB_ORYNI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148886912|sp|P0C2Z8|ATPB_ORYSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148886914|sp|P12085|ATPB_ORYSJ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148897909|sp|P0C2Z7|ATPB_ORYSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|49615002|dbj|BAD26785.1| ATPase beta subunit [Oryza nivara]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 179/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVV----HQGKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT     +       VV      GK  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|302346243|ref|YP_003814541.1| ATP synthase F1, alpha subunit [Prevotella melaninogenica ATCC
           25845]
 gi|302150641|gb|ADK96902.1| ATP synthase F1, alpha subunit [Prevotella melaninogenica ATCC
           25845]
          Length = 527

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 92/430 (21%), Positives = 166/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L +     + +  +      +  V+ +  D V    +G  E I
Sbjct: 29  EVGSVLTVGDGVARVYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCVLLGPTEGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +   D   M +  K P  + RQ
Sbjct: 85  KEGQSVKRTHRIASIRVNDNFLGRVVNPLGEAIDGKGEIDLTDSFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDAIINQKSFYEQGNPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   +++         +++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVATLVQNLKERGALPYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGYS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L+I D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVIYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINNQQEIAEKMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPECMKGHVRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQVKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDKVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|157689160|gb|ABV65136.1| ATP synthase CF1 beta subunit [Liquidambar styraciflua]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708552|emb|CAB89959.1| ATP synthase beta subunit [Plumeria obtusa]
          Length = 484

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 19  GHIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPGIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|114509194|gb|ABI75165.1| ATPase alpha subunit [Echinodorus osiris]
          Length = 361

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 161/365 (44%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L +    G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGLKEIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKALLGRVVDALGVPIDGKGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNQKAKENAKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     D L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSADALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|6687278|emb|CAB64899.1| ATP synthase beta subunit [Cephalanthus occidentalis]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQSINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|269798931|gb|ACZ43765.1| ATP synthase beta subunit [Corchoropsis crenata]
          Length = 473

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 5   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNLGESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|212896662|gb|ACJ38534.1| membrane-bound ATP synthase subunit B [Galactia striata]
          Length = 470

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIR--------INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I         +  + V    +   E +  G  V   G    +       GR
Sbjct: 33  KGRDTVGQQINVTWEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 93  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 151

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 152 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYTEMKESGVINEQNIA 211

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 212 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 271

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 272 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +  +    D   +    +   + R++E +DI  
Sbjct: 330 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQRWIVGDEHYETAQRVKQTLQRYKELQDIIA 389

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + G     +      V +   I  FL Q 
Sbjct: 390 VLGLDELSEED-RLTVARARKIERFLSQP 417


>gi|222356624|gb|ACM48842.1| ATPase alpha subunit [Dioscorea caucasica]
          Length = 369

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 83/371 (22%), Positives = 152/371 (40%), Gaps = 19/371 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ LG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQMNSRGTSQSETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 240 FYLHSRLLERAANRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D    
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQ 356

Query: 405 KAVHQVPIIYD 415
             +++   + +
Sbjct: 357 ALLNRGARLTE 367


>gi|157488196|gb|ABV57775.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007a]
 gi|157488199|gb|ABV57777.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007a]
 gi|157488202|gb|ABV57779.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b]
 gi|157488205|gb|ABV57781.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b]
 gi|157488208|gb|ABV57783.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b]
 gi|157488211|gb|ABV57785.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007c]
 gi|157488214|gb|ABV57787.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007d]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + +V +G   D LGQ I +  ++        V   
Sbjct: 20  SGRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +   ++   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGDEHYETAQNVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|30351873|emb|CAD48095.1| ATP synthase beta subunit [Charybdis undulata]
          Length = 493

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKDSGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|15422208|emb|CAC60323.1| ATP synthase beta subunit [Argophyllum sp. Telford 5462]
          Length = 493

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|6687625|emb|CAB65027.1| ATP synthase beta subunit [Griselinia littoralis]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718068|gb|AAK72775.1| ATP synthase beta subunit [Griselinia lucida]
          Length = 495

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|16943656|emb|CAD10775.1| ATP synthase, beta subunit [Chlorogalum pomeridianum]
          Length = 494

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085091|gb|AAX62952.1| ATP synthase beta subunit [Acridocarpus natalitius]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV    + D LGQ I +  ++        V   
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVV---NSRDTLGQQINVTCEVQQLLGNNRVRAV 65

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 66  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSA 124

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 125 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 184

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 185 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 244

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 245 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 302

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 303 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 362

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 363 LQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 421

Query: 420 S 420
            
Sbjct: 422 P 422


>gi|56415733|ref|YP_152808.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364661|ref|YP_002144298.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81599724|sp|Q5PKX2|ATPB_SALPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740672|sp|B5BIN6|ATPB_SALPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56129990|gb|AAV79496.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096138|emb|CAR61734.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 460

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVDFPQDAVPRVYDALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|186886291|gb|ACC93548.1| ATPase F1 alpha subunit [Juncus oxymeris]
          Length = 355

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 154/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 3   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 62

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG+ +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 63  GKGALGEHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 121

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 122 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 181

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 182 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 241

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 242 GDVFYLHSRLLERASKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 301

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 302 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 353


>gi|119368030|dbj|BAF40519.1| ATP synthase beta subunit [Crossostylis grandiflora]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVN-SRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|4995647|emb|CAB44210.1| H(+)-transporting ATP synthase [Malva canariensis]
          Length = 482

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENLGESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|62085171|gb|AAX62990.1| ATP synthase beta subunit [Panda oleosa]
          Length = 482

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALAMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|80091|pir||S17726 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           Bacillus firmus (strain OF4)
          Length = 469

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 107/415 (25%), Positives = 186/415 (44%), Gaps = 18/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD--------NLGQVIRINLDIVYI 72
           +  G+I+ +      V   S  +   +  +     +D         L   + +  D V  
Sbjct: 1   MNTGHITQVMGPVVDVKFKSGQLPEINNALKSTSGADKNAVDVTVTLEVALHLGDDSVRT 60

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +G  + +  G      G    +       GRV N LG+ ID  + +        I  +
Sbjct: 61  VAMGSTDGLVRGTEALDTGAPISVPVGEATLGRVFNVLGEAIDLGEPVAADVKRDPIHRE 120

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +  +
Sbjct: 121 APKFEELSTTTEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGV 180

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+   VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AE+F  
Sbjct: 181 ISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEHFRD 240

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+
Sbjct: 241 RDGQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGHLQERI--TSTKVGS 298

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           +T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLAS SR       
Sbjct: 299 VTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEIV 358

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + +++E +DI  I G     +      VH+   I  FL Q+
Sbjct: 359 GEEHYSVARQVQQTLQKYKELQDIIAILGMDELSEED-KLVVHRARRIQFFLSQN 412


>gi|167747404|ref|ZP_02419531.1| hypothetical protein ANACAC_02124 [Anaerostipes caccae DSM 14662]
 gi|317471135|ref|ZP_07930506.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
 gi|167652766|gb|EDR96895.1| hypothetical protein ANACAC_02124 [Anaerostipes caccae DSM 14662]
 gi|316901350|gb|EFV23293.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
          Length = 465

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/411 (28%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVG 76
             G I+ I      +     ++  + D +    K    L  V+ ++     D V    +G
Sbjct: 5   HTGKITQIIGAVLDIKFSDGHLPEINDAIDIMTKQGGKL--VVEVSQHLGDDTVRCIAMG 62

Query: 77  IGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G   V   G   +       GR+ N LG PID   +  +      I  K P  
Sbjct: 63  PTDGLVRGMEAVCTGGPISVPVGEQTLGRMFNVLGDPIDNKPA-PENAKRQPIHRKAPAF 121

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
            ++    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+ 
Sbjct: 122 KDQSTETEVLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVF 181

Query: 195 --VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +      + K+ +V    +E P  R    LT +TIAE F  +G  
Sbjct: 182 TGVGERTREGNDLYHEMSESGVIDKTAMVFGQMNEPPGARMRVGLTGLTIAENFRDEGGK 241

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V
Sbjct: 242 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKDGSITSV 299

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD   VL+R++ E+G YP VDPL S SR+ D      + 
Sbjct: 300 QAVYVPADDLTDPAPATTFAHLDATTVLSRAIVEQGIYPAVDPLESTSRILDPKIVGEEH 359

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 360 YQVARGVQEILQRYKELQDIIAILGMDELSDEE-KLIVDRARKIQRFLSQP 409


>gi|153008439|ref|YP_001369654.1| F0F1 ATP synthase subunit beta [Ochrobactrum anthropi ATCC 49188]
 gi|190358689|sp|A6WXX1|ATPB_OCHA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151560327|gb|ABS13825.1| ATP synthase F1, beta subunit [Ochrobactrum anthropi ATCC 49188]
          Length = 517

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 186/416 (44%), Gaps = 27/416 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG--QVIR----INLDIVYICPVGI 77
           G I+ +      V      + L    +     +DNLG   V+     +  + V    +  
Sbjct: 49  GKITQVIGAVVDVQFEDGQLPL----ILNALETDNLGSRLVLEVAQHLGENTVRTIAMDS 104

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GR++N +G+P+D    + K      I  + P  +
Sbjct: 105 TEGLVRGHEVRDTGNPIMVPVGEETLGRIMNVIGEPVDEAGPI-KTTARRAIHQEAPEYI 163

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 164 EQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA 223

Query: 194 LVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F
Sbjct: 224 GVGERTREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENF 283

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG
Sbjct: 284 RDKGQDVLFFVDNIFRFTQAGSELSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKG 341

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD    LNRS+AE+G YP VDPL S SR+ D   
Sbjct: 342 SITSVQAIYVPADDLTDPAPATSFAHLDATTTLNRSIAEKGIYPAVDPLESTSRMLDPMI 401

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 402 VGEEHYAVARQVQSILQRYKSLQDIIAILGMDELSEDD-KLTVARARKIERFLSQP 456


>gi|114706547|ref|ZP_01439448.1| ATP synthase subunit B [Fulvimarina pelagi HTCC2506]
 gi|114537939|gb|EAU41062.1| ATP synthase subunit B [Fulvimarina pelagi HTCC2506]
          Length = 484

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 194/436 (44%), Gaps = 26/436 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G ++ +      V        + + +      +  + +V   +  + V    + + E
Sbjct: 9   RPKGRVAQVIGPVVDVEFDDHLPAILNSLECDNNGNRLVLEVAQHLGENTVRTIAMDLTE 68

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   R+       GR++N +G+PID    +   + +  I    P  +++
Sbjct: 69  GLVRGQPVSDTGNPIRVPVGDATLGRILNVIGEPIDEVGPVNSNE-TRAIHQSAPDYIDQ 127

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+VID+ TP   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 128 SPESQILVTGIKVIDLLTPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGV 187

Query: 196 GERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           GER RE  +   + +   +              K+ +V    +E P  R    LT +TIA
Sbjct: 188 GERTREGNDLYHEMIESGVNVDPHKNDGSAEGSKAALVFGQMNEPPGARARVALTGLTIA 247

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F   G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  
Sbjct: 248 EHFRDAGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTT 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT+V ++ V  D+  DP   +  + LD   VLNRS++E+G YP VDPL S SR+  
Sbjct: 306 NKGSITSVQAIYVPADDLTDPAPATTFTHLDATTVLNRSISEKGIYPAVDPLDSTSRMLQ 365

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                 +  ++   +  ++ +++  +DI  I G     +      V +   I  F  Q  
Sbjct: 366 PMIVGEEHYQVAREVQEILQKYKSLQDIIAILGMDELSEED-KLTVQRARKIERFFSQP- 423

Query: 422 SDLSSEDVFQEITKKL 437
              +  ++F     +L
Sbjct: 424 --FAVAEIFTNTPGEL 437


>gi|229817111|ref|ZP_04447393.1| hypothetical protein BIFANG_02368 [Bifidobacterium angulatum DSM
           20098]
 gi|229784900|gb|EEP21014.1| hypothetical protein BIFANG_02368 [Bifidobacterium angulatum DSM
           20098]
          Length = 542

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 96/441 (21%), Positives = 181/441 (41%), Gaps = 23/441 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           +K L+   Q  +        + GY+++       VT L       + +  +       G 
Sbjct: 12  RKALDDFVQAYKPTDTPT-QEVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TQGL 66

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
              ++   + +  +G    I  G  V   G    +     + GRV++ LG+PIDG   + 
Sbjct: 67  AFNLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGRPIDGMGEI- 125

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----S 175
           K +    + ++ P  M+R  V++   TG++ ID  TP+  GQR  +      GK      
Sbjct: 126 KIEGRRILEAQAPDVMHRHPVDEPMSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAID 185

Query: 176 TLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           T+++  A  +  D     + I   +G++G  +    +          + +V + + +S  
Sbjct: 186 TIINQKANWESGDPKKQVRCIYVAIGQKGSTIASVKQSLEESGAMEYTTIVASPASDSAG 245

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
            + +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF  
Sbjct: 246 FKYIAPYTGSAIGQHWMYHGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYL 305

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +   G++T +  V    ++ +  I  +V SI DG I L   L    +
Sbjct: 306 HSRLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQ 365

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      +
Sbjct: 366 RPAVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQL 422

Query: 408 HQVPIIYDFLKQSPSDLSSED 428
           ++   + + LKQ      S +
Sbjct: 423 NRGAHLTELLKQPQFSPYSME 443


>gi|183206674|gb|ACC54535.1| ATP synthase beta subunit [Campanula rotundifolia]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|194267389|gb|ACF35680.1| ATP synthase beta subunit [Platanus occidentalis]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|139390159|ref|YP_001123732.1| ATP synthase CF1 beta subunit [Lobularia maritima]
 gi|190358677|sp|A4QLK1|ATPB_LOBMA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286936|dbj|BAF50556.1| ATPase beta subunit [Lobularia maritima]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAIA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 79  MSATEGLKRGMDVIDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESKVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|119367982|dbj|BAF40472.1| ATP synthase beta subunit [Schinziophyton rautanenii]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|305671685|gb|ADM63152.1| ATP synthase beta subunit [Dipelta yunnanensis]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TTKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPGIVGDKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|269798927|gb|ACZ43763.1| ATP synthase beta subunit [Corchoropsis psilocarpa]
          Length = 474

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNLGESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|193216472|ref|YP_001999714.1| F0F1 ATP synthase subunit beta [Mycoplasma arthritidis 158L3-1]
 gi|193001795|gb|ACF07010.1| ATP synthase beta subunit [Mycoplasma arthritidis 158L3-1]
          Length = 503

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 118/426 (27%), Positives = 199/426 (46%), Gaps = 17/426 (3%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR- 64
            + + A   +  +    GYIS I      V         + + +     + +   QV+  
Sbjct: 19  AINETAISETNEMPTNMGYISQILGAVIDVRFEENKAPRILNALEVVLDDPNAPRQVLEV 78

Query: 65  ---INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
              I  D V    + +   +  G  V   G    +        R+ N LG+PID   ++ 
Sbjct: 79  AQHIGNDTVRTIAMNLTIGLKRGMKVKDLGAPISVPVGKKVLSRMFNVLGEPID-TGAI- 136

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           + ++ M I    P    ++   + F+TGI+VID+  P   G +IG+F G+G+GK+ L+  
Sbjct: 137 EFNVKMPIHRTPPSYEEQKSTLEIFETGIKVIDLLMPYVKGGKIGLFGGAGVGKTVLIQE 196

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +     +  K+ +V    +E P  R  AP 
Sbjct: 197 LINNIAKEHGGLSVFAGVGERTREGNDLYHEMKASGVLDKTALVFGQMNEPPGARMRAPF 256

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 257 TALTMAEYFRDTMGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 316

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T+V ++ V  D+  DP   +  + LD   VL+R +A  G YP +DPLA
Sbjct: 317 RI--TSTNKGSVTSVQAIYVPADDLTDPAPATTFTHLDAKTVLDRDIAALGIYPAIDPLA 374

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR+ D      +   +   + +++ RF+E +DI  I G     +    K V +   I 
Sbjct: 375 SNSRMMDPNVIGLEHYNIARKVQNILQRFKELQDIIAILGMHELSEED-KKIVARARRIR 433

Query: 415 DFLKQS 420
           +FL Q 
Sbjct: 434 NFLSQP 439


>gi|14717933|gb|AAK72709.1| ATP synthase beta subunit [Ancistrocladus korupensis]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|21633365|gb|AAM52157.1| ATP synthase beta subunit [Evolvulus glomeratus]
 gi|21633367|gb|AAM52158.1| ATP synthase beta subunit [Evolvulus nuttallianus]
          Length = 490

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++++ +    +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQMNVACEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    +     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGTPISVPVGGATLGRIFNVLGKPVDNLGPVD-TKTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62184034|gb|AAX73328.1| ATP synthase beta subunit [Banksia coccinea]
          Length = 497

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|11466794|ref|NP_039390.1| ATP synthase CF1 beta subunit [Oryza sativa Japonica Group]
 gi|11991|emb|CAA34003.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|344014|dbj|BAA00334.1| ATP synthetase beta subunit [Oryza sativa Japonica Group]
 gi|226612|prf||1603356AJ ATPase beta
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 179/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVV----HQGKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT     +       VV      GK  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPRGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|26992088|ref|NP_747513.1| F0F1 ATP synthase subunit beta [Pseudomonas putida KT2440]
 gi|148550495|ref|YP_001270597.1| F0F1 ATP synthase subunit beta [Pseudomonas putida F1]
 gi|81439305|sp|Q88BX4|ATPB_PSEPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166990374|sp|A5WBA3|ATPB_PSEP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|24987230|gb|AAN70977.1|AE016742_6 ATP synthase F1, beta subunit [Pseudomonas putida KT2440]
 gi|148514553|gb|ABQ81413.1| ATP synthase F1, beta subunit [Pseudomonas putida F1]
 gi|313496403|gb|ADR57769.1| AtpB [Pseudomonas putida BIRD-1]
          Length = 458

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDVVPSVYNALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G D+V       +       GR+++ LG PID    +G+ +    I    P   ++
Sbjct: 60  GLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RRGIHQPAPSFADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEAD-KQLVARARKIQRFLSQP 402


>gi|139522595|gb|ABO77693.1| ATP synthase beta subunit [Centropogon aequatorialis]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|118918089|dbj|BAF40434.1| ATP synthase beta subunit [Balanops pancheri]
          Length = 487

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|113910864|gb|ABI48164.1| ATPase beta subunit [Hymenostylium recurvirostre]
          Length = 472

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 184/418 (44%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT   S+   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPSKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|14718136|gb|AAK72807.1| ATP synthase beta subunit [Mollugo verticillata]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|6688636|emb|CAB65223.1| ATP synthase beta subunit [Melanophylla alnifolia]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   DN+GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVN-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7687960|emb|CAB89700.1| ATP synthase beta subunit [Austrobaileya scandens]
          Length = 498

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + +F+V +G+  D +GQ I +  ++        V    
Sbjct: 21  GRIDQIIGPVLEVAFPPGKMPNIYNFLVVKGQ--DTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VSGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718124|gb|AAK72801.1| ATP synthase beta subunit [Melanophylla alnifolia]
          Length = 494

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   DN+GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVN-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|7620553|gb|AAF64663.1| F1 ATPase alpha subunit [Podocarpus macrophyllus]
          Length = 406

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 93/408 (22%), Positives = 162/408 (39%), Gaps = 23/408 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L+Q +  G+ V      S   G  +    + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNQ-IQAGEMVEFA---SGVKGIALNPENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSL--GKGDLSMEIMSKVPPAMNRQRVEKGFK 146
            G    +       GRV++ALG PIDG  +L   KG     + +K P  + R+ V +  +
Sbjct: 57  TGSIVDVPVGKALLGRVVDALGVPIDGKGALQVDKGAERRRVEAKAPGIIERKSVHEPPQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV----------IISLVG 196
           TG + +D   P+  GQR  +      GK+ +      +     +          +   +G
Sbjct: 117 TGSKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRSHLRSGTSDSVYRVYVAIG 176

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++     D L  +++  AT+ +   L+  AP +   + EY    G + L+I
Sbjct: 177 QKRSTVAQSVQIIAEADALGYTIINAATASDPAPLQFPAPYSGCAMGEYSRDNGMHALII 236

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P     P  VF    R LER      +   G++TA+  +
Sbjct: 237 YDDLSKQAVAYRQMSLLLRRPPGREASPGDVFYLHSRPLERAAKRSDQTGAGSLTALPVI 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +     +V SI DG I L   L   G  P ++   SVSR+   A S   K++ 
Sbjct: 297 ETQAGDVSAYTPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQSKAMKQVC 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            SL   + ++ E   +         +D       ++   + +  KQ  
Sbjct: 357 GSLKLELAQYRE---VAAFAQSGSDLDAATQAPSNRGARLTEVPKQPQ 401


>gi|3850946|gb|AAC72165.1| ATP synthase beta subunit [Banksia cuneata]
          Length = 490

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|224830588|gb|ACN66389.1| ATP synthase beta chain [Tiliacora funifera]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF   K  +VLL +D I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVKEQDVLLFIDHIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|183206508|gb|ACC54452.1| ATP synthase beta subunit [Codonopsis dicentrifolia]
          Length = 478

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 8   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|146309620|ref|YP_001190085.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina ymp]
 gi|166990373|sp|A4Y187|ATPB_PSEMY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145577821|gb|ABP87353.1| ATP synthase F1, beta subunit [Pseudomonas mendocina ymp]
          Length = 458

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 189/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDQVPNVYEALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G+   +       GR+++ LG PID    +G+ +   EI    P    +
Sbjct: 60  GLKRGLDVNSTGKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQ-WEIHRAAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEDD-KLLVARARKIQRFLSQP 402


>gi|4995763|emb|CAB44249.1| H(+)-transporting ATP synthase [Phaleria capitata]
          Length = 477

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 3   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGSTLGRIFNVLGEPIDNLGPVD-TRTTSPIHKSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARTRKIERFLSQP 416


>gi|62085133|gb|AAX62972.1| ATP synthase beta subunit [Galearia filiformis]
          Length = 482

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E    R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPAGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|62085124|gb|AAX62968.1| ATP synthase beta subunit [Dovyalis rhamnoides]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62085202|gb|AAX63005.1| ATP synthase beta subunit [Thryallis longifolia]
          Length = 483

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|212896648|gb|ACJ38527.1| membrane-bound ATP synthase subunit B [Desmodium pauciflorum]
          Length = 461

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|212896608|gb|ACJ38507.1| membrane-bound ATP synthase subunit B [Pachyrhizus erosus]
          Length = 470

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESRVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|194267333|gb|ACF35653.1| ATP synthase beta subunit [Floydia praealta]
          Length = 487

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKGGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917364|dbj|BAF40471.1| ATP synthase beta subunit [Neoboutonia mannii]
          Length = 489

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718147|gb|AAK72812.1| ATP synthase beta subunit [Neurada procumbens]
          Length = 476

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|62184004|gb|AAX73313.1| ATP synthase beta subunit [Banksia ilicifolia]
 gi|62184006|gb|AAX73314.1| ATP synthase beta subunit [Banksia cuneata]
 gi|62184008|gb|AAX73315.1| ATP synthase beta subunit [Banksia elegans]
 gi|62184010|gb|AAX73316.1| ATP synthase beta subunit [Banksia elderiana]
 gi|62184012|gb|AAX73317.1| ATP synthase beta subunit [Banksia lindleyana]
 gi|62184018|gb|AAX73320.1| ATP synthase beta subunit [Banksia candolleana]
 gi|62184020|gb|AAX73321.1| ATP synthase beta subunit [Banksia sceptrum]
 gi|62184022|gb|AAX73322.1| ATP synthase beta subunit [Banksia baxteri]
 gi|62184024|gb|AAX73323.1| ATP synthase beta subunit [Banksia speciosa]
 gi|62184026|gb|AAX73324.1| ATP synthase beta subunit [Banksia menziesii]
 gi|62184028|gb|AAX73325.1| ATP synthase beta subunit [Banksia baueri]
 gi|62184032|gb|AAX73327.1| ATP synthase beta subunit [Banksia ashbyi]
 gi|62184058|gb|AAX73340.1| ATP synthase beta subunit [Banksia foliosissima]
 gi|62184060|gb|AAX73341.1| ATP synthase beta subunit [Banksia serratuloides]
 gi|62184062|gb|AAX73342.1| ATP synthase beta subunit [Banksia calophylla]
 gi|62184064|gb|AAX73343.1| ATP synthase beta subunit [Banksia sessilis]
 gi|62184066|gb|AAX73344.1| ATP synthase beta subunit [Banksia splendida]
 gi|62184068|gb|AAX73345.1| ATP synthase beta subunit [Banksia formosa]
          Length = 497

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|282881586|ref|ZP_06290255.1| ATP synthase F1, alpha subunit [Prevotella timonensis CRIS 5C-B1]
 gi|281304572|gb|EFA96663.1| ATP synthase F1, alpha subunit [Prevotella timonensis CRIS 5C-B1]
          Length = 529

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 95/447 (21%), Positives = 170/447 (38%), Gaps = 38/447 (8%)

Query: 6   ETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  +    +L   + G + ++      +  L +     + +  +      +  V+ 
Sbjct: 12  EVLLQQLKGIQTDLKFEEVGTVLNVGDGVARLYGL-RNAEANELLEFENG---TMAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G    I  G       R   I  +    GRVIN LG+ IDG   L   +
Sbjct: 68  LEEDNVGCILLGPTSGIKEGMTAKRTHRIASIRVNDSMLGRVINPLGEAIDGLGELDLTE 127

Query: 124 -LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M +  K P  + RQ V++  +TGI+ +D   P+  GQR  +      GK+ +     
Sbjct: 128 SFEMPLERKAPGVIYRQPVKEPLQTGIKAVDSMIPIGRGQRELIVGDRQTGKTAIALDTI 187

Query: 183 RSDCF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
            +             +   +G++   V   ++          ++VV AT+ +   ++  A
Sbjct: 188 INQKSFYEEGKPVYCVYVAIGQKASTVANLVQILKEHGALPYTIVVSATAADPAAMQYYA 247

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P     I EYF  +G++ L++ D +++ A + REI+           YP  VF    RLL
Sbjct: 248 PFAGAAIGEYFRDRGESALVVYDDLSKQAVAYREISLILRRPSGREAYPGDVFYLHSRLL 307

Query: 295 ERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           ER      +                     G++TA+  +     + +  I  +V SI DG
Sbjct: 308 ERAARINDQQEVAEMMNDLPESLKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDG 367

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L  +L  +G  P ++   SVSR+   A     KK+  +L   + ++ E         
Sbjct: 368 QIYLETNLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDMAQYRELE---AFSK 424

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +   +D +    + +       L Q  
Sbjct: 425 FSSDMDSVTAMTLDRGRKNNQLLIQPQ 451


>gi|257852932|gb|ACV71477.1| ATP synthase beta subunit [Mammea siamensis]
          Length = 484

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPV-HTRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVIDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|148652009|ref|YP_001279102.1| F0F1 ATP synthase subunit beta [Psychrobacter sp. PRwf-1]
 gi|172048450|sp|A5WBW1|ATPB_PSYWF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148571093|gb|ABQ93152.1| ATP synthase F1, beta subunit [Psychrobacter sp. PRwf-1]
          Length = 475

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +V  G ++    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFNRTDVPQVYDALVVDGTDTTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG+PID    +   D    I  + P    +
Sbjct: 60  GLKRGLPVTNTGAPITVPVGEATLGRIMDVLGRPIDEQGPVNSED-KWSIHRQAPSYDEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 ANSTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AEYF  
Sbjct: 179 GERTREGNDFYHEMQEAGVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRD 238

Query: 248 KGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           + D         L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  + 
Sbjct: 239 QKDENGKGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  
Sbjct: 297 TQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQL 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      +   +   +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 357 DPLVIGEEHYNVARGVQEVLQRYKELKDIIAILGMDELSEDD-KMVVYRARKIQRFLSQP 415


>gi|52082864|gb|AAU26013.1| ATPase beta subunit [Piper umbellatum]
          Length = 477

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G+  D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFSPGKMPNIYNALIVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMQVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|24940198|emb|CAD43380.1| ATP synthase beta subunit [Lobostemon fruticosus]
          Length = 469

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRVVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|5758857|gb|AAD50831.1| ATP synthase beta subunit [Bowiea volubilis]
          Length = 495

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--HDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 79  MSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVD-TRITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|91975039|ref|YP_567698.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisB5]
 gi|123749423|sp|Q13DP2|ATPB_RHOPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91681495|gb|ABE37797.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisB5]
          Length = 476

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 188/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +  ++  + +V   +    V    +   E 
Sbjct: 7   QTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    +   +    I ++ P   ++ 
Sbjct: 67  LVRGQEVTDTGSPIMVPVGIGTLGRIMNVIGEPVDEQGPV-ANEGLRPIHAEAPLYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +  ++ +++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 364 EHYQTARMVQQVLQKYKSLQDIIAILGMDELSEED-KLAVARARKIERFLSQP 415


>gi|313576711|gb|ADR66863.1| ATP synthase beta subunit [Ternstroemia longipes]
          Length = 473

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|305671683|gb|ADM63151.1| ATP synthase beta subunit [Platysace lanceolata]
          Length = 489

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 13  GSITQIIGPVLDVAFPPGKMPNIYNALVVQG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|301168110|emb|CBW27696.1| putative flagellum-specific ATP synthase [Bacteriovorax marinus SJ]
          Length = 457

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 151/417 (36%), Positives = 233/417 (55%), Gaps = 7/417 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEIS 82
           G + +   + + V  LS+ V +G  V    +  +  LG+V+ IN       P      I+
Sbjct: 28  GKVFANKGMLFEVN-LSRAV-IGSNVEFVTEFGERCLGEVVAINGHKCMAMPYDEISGIN 85

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
               V+       I  S    GRVI+  G PIDG   +   + S  I       + R  +
Sbjct: 86  SETKVYLKDLTTTIKLSKNMLGRVIDFQGNPIDGKGPITDIEESRSIYGTALNPLERPPI 145

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++    G+  ++ F     GQR+ + AGSG+GKS  L M A++   D  +I+L+GERGRE
Sbjct: 146 KEPLDVGVHAVNCFMTAGKGQRMAIMAGSGVGKSVTLGMIAQNSSADVNVIALIGERGRE 205

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V EFIE  LG + +K+SVV+VATSD SP++R  A   A TI+E+F     +VLL++DSIT
Sbjct: 206 VLEFIESDLGPEGIKRSVVIVATSDTSPLIRMKAAYVATTISEFFRDDNKDVLLMMDSIT 265

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI+ ++GE P  +GY  SVF++LP+L+ER G      G IT + +VLV+G + 
Sbjct: 266 RFAMANREISLSAGEPPGQKGYTPSVFAQLPKLMERAGTKSNS-GTITGIYTVLVEGGDM 324

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           ++PIAD+VR+I DGHIVL+R LA   ++P +D L S+SR+ +K  + + K + S L  L+
Sbjct: 325 DEPIADAVRAIADGHIVLSRELASRNQFPAIDVLQSLSRVMNKVTTNEHKIVASHLRDLL 384

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             ++E  D+  +G Y  G +  +DKA+     +   LKQ    +S     + +  ++
Sbjct: 385 SAYKENEDLINVGAYARGSNPKVDKALVIYDDLMALLKQFQG-MSDYLTIEALYDQM 440


>gi|119368028|dbj|BAF40518.1| ATP synthase beta subunit [Carallia brachiata]
          Length = 489

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVN-SRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6017796|gb|AAF01632.1| ATP synthase beta subunit [Disanthus cercidifolius]
          Length = 486

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|327541724|gb|EGF28244.1| F0F1 ATP synthase subunit alpha [Rhodopirellula baltica WH47]
          Length = 508

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 190/431 (44%), Gaps = 15/431 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
                +A+  E ++  L ++  G I+++ +    V+ L   V   + V   G   D  G 
Sbjct: 10  NAFSQIAESREAFTPELSLREIGTITNVATGIAKVSGL-PNVGFEELVRFPG---DVYGI 65

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              ++   + +  +G    +  GD V+  GR           GRV++ LG+P+DG+  + 
Sbjct: 66  AFNVDEHEIGVVLLGDYSRLHAGDEVWRTGRVMDVAVGEGLLGRVVDPLGRPLDGNGVVH 125

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +  + I    PP M+R  V    +TGI+VID   P+  GQR  +      GK+ +   
Sbjct: 126 CNE-RLPIERPAPPIMDRAPVTVPLQTGIKVIDALIPIGRGQRELILGDRRTGKTAIALD 184

Query: 181 FARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
              +        +   +G+R   V + +      D ++ +VVVV+  ++ P L  +AP  
Sbjct: 185 TMINQRGQNTVCVYCAIGQRASAVAKAVAVLKENDAMEYTVVVVSEGNDPPGLAYIAPYA 244

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAEYF  KG +VL++ D +T+ A + RE++      P    +P  +F    RLLER 
Sbjct: 245 ATSIAEYFMEKGRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERS 304

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
               ++   G++TA+  +  +  + +  I  ++ SI DG I L+ SL E G  P VD   
Sbjct: 305 THLREDLGGGSLTALPIIETEAQDISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGK 364

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  KA  A  + +   L     +F+E       G     +D      +     I  
Sbjct: 365 SVSRVGGKAQRATYRSVAGDLKLAYAQFQELETFARFG---ARLDDSTRAIIANGQRIRS 421

Query: 416 FLKQSPSDLSS 426
            LKQ      S
Sbjct: 422 CLKQPEFSPVS 432


>gi|118917334|dbj|BAF40451.1| ATP synthase beta subunit [Clutia augustifolia]
          Length = 489

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRAAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21633339|gb|AAM52144.1| ATP synthase beta subunit [Aniseia cernua]
          Length = 487

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V   S  +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 18  GRIVKIIGPVLDVAFPSGKMPYIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 77

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 78  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQ 136

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 137 LDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 196

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 197 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 256

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 257 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 314

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 315 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 374

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|157502840|gb|ABV58386.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502843|gb|ABV58388.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502846|gb|ABV58390.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502849|gb|ABV58392.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502852|gb|ABV58394.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502855|gb|ABV58396.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502858|gb|ABV58398.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502861|gb|ABV58400.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502864|gb|ABV58402.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502867|gb|ABV58404.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502870|gb|ABV58406.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502873|gb|ABV58408.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502876|gb|ABV58410.1| ATP synthase CF1 beta subunit [Lobelia macrodon]
 gi|157502882|gb|ABV58414.1| ATP synthase CF1 beta subunit [Lobelia roughii]
 gi|157502885|gb|ABV58416.1| ATP synthase CF1 beta subunit [Lobelia roughii]
          Length = 498

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + ++ +G   D LGQ I +  ++        V   
Sbjct: 20  SGRIGQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMRESGVINEQNFSESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +   ++   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGDEHYETAQNVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|56675873|emb|CAD43384.2| ATP synthase beta subunit [Omphalodes verna]
          Length = 487

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718095|gb|AAK72787.1| ATP synthase beta subunit [Kiggelaria africana]
          Length = 484

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTHTTS-PIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 424


>gi|7708528|emb|CAB89946.1| ATP synthase beta subunit [Oncotheca balansae]
          Length = 490

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ+I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALLIKG--RDTVGQLINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62902877|gb|AAY19353.1| ATP synthase beta subunit [Ziziphus obtusifolia]
          Length = 479

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQKINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYIEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|62085110|gb|AAX62961.1| ATP synthase beta subunit [Clutia tomentosa]
          Length = 482

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRAAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|225544131|ref|YP_002720119.1| atpB [Jatropha curcas]
 gi|224979572|gb|ACN72699.1| atpB [Jatropha curcas]
          Length = 495

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|207091752|ref|ZP_03239539.1| flagellum-specific ATP synthase [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 434

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 159/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|167391812|ref|YP_001671690.1| ATP synthase CF1 beta subunit [Carica papaya]
 gi|190358275|sp|B1A942|ATPB_CARPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|166344139|gb|ABY86789.1| ATP synthase CF1 beta chain [Carica papaya]
          Length = 498

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|156530087|gb|ABU75140.1| AtpB [Meliaceae sp. NBGB 19514782]
          Length = 488

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|65332598|gb|AAY42223.1| ATP synthase beta subunit [Anisophyllea cinnamomoides]
          Length = 488

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVV---KRRDTVGQQINVTCEVQQLLGNNRVRAV 68

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 69  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 127

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 128 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 187

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 188 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 247

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 248 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 305

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 306 STKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 366 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQ 424

Query: 420 S 420
            
Sbjct: 425 P 425


>gi|24940190|emb|CAD43377.1| ATP synthase beta subunit [Lappula squarrosa]
          Length = 484

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6688863|emb|CAB65307.1| ATP synthase beta subunit [Nymphoides geminata]
          Length = 498

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   DN G+ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNSGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLKRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|16943757|emb|CAD10769.1| atp synthase, beta subunit [Herreria montevidensis]
          Length = 498

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+SI   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIASIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|186886237|gb|ACC93521.1| ATPase F1 alpha subunit [Luzula divulgata]
          Length = 353

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 2   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 62  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 120

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 121 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 181 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 240

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 241 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 300

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 301 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 352


>gi|41030|emb|CAA23519.1| unnamed protein product [Escherichia coli]
          Length = 513

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 103/443 (23%), Positives = 181/443 (40%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L   D    + +  P  + RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPLD-HDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TRLAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +A +    + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLARMPVALMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLER-------------IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLE               G  + + G++TA+  +     + +  +  +V SI DG    
Sbjct: 296 RLLEMLQRVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQXXX 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 EXNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFSQFASD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + LKQ  
Sbjct: 413 LDDATRKQLDHGQKVTELLKQKQ 435


>gi|323149089|ref|YP_004222653.1| ATP synthase CF1 beta subunit [Anthriscus cerefolium]
 gi|289645582|gb|ADD13645.1| ATP synthase CF1 beta subunit [Anthriscus cerefolium]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVNTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|212896658|gb|ACJ38532.1| membrane-bound ATP synthase subunit B [Apios americana]
          Length = 470

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 60

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 61  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 120 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 179

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+ +
Sbjct: 180 SVFGGVGERTREGNDLYMEMKESGVINXQNIAESKVALVYGQMNEPPGARMXVGLTALPM 239

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 240 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 298 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 357

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 358 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQ 416

Query: 420 S 420
            
Sbjct: 417 P 417


>gi|148827675|ref|YP_001292428.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG]
 gi|166201710|sp|A5UGY9|ATPB_HAEIG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148718917|gb|ABR00045.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG]
          Length = 457

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +     ++       GR++N LG+PID   ++G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNNPIQVPVGTKTLGRIVNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|118917416|dbj|BAF40523.1| ATP synthase beta subunit [Flacourtia indica]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTQTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|115564923|emb|CAJ70592.1| ATP synthase beta subunit [Maingaya malayana]
          Length = 465

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|62085141|gb|AAX62976.1| ATP synthase beta subunit [Homalanthus populneus]
          Length = 490

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|308064174|gb|ADO06061.1| flagellum-specific ATP synthase [Helicobacter pylori Sat464]
          Length = 434

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIQKKALMEQFLTQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|256848005|ref|ZP_05553449.1| ATP synthase F1, beta subunit [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715065|gb|EEU30042.1| ATP synthase F1, beta subunit [Lactobacillus coleohominis
           101-4-CHN]
          Length = 473

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 117/412 (28%), Positives = 190/412 (46%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSDNLGQV-IRINLDIVYICPV 75
              G +  +      V   +    L +      + +  +     +V + +   +V    +
Sbjct: 2   STTGKVVQVIGPVVDVEFPADE-KLPEINTALKIQEADDKTLTVEVALELGDGVVRTIAM 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + G    +       GRV N LG+PIDG    G+    M I    P 
Sbjct: 61  DGTDGLKRGMDVENTGASISVPVGDDTLGRVFNVLGEPIDGGPEFGEDAQRMPIHRDAPK 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
             +     +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+
Sbjct: 121 YDDLNNETEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISV 180

Query: 195 ---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
              VGER RE  +   +  G  +  K+ +V    +E P  R    LT +TIAEYF     
Sbjct: 181 FTGVGERSREGNDMYYEMKGSGVLDKTAMVYGQMNEPPGARMRVALTGLTIAEYFRDVKG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT+
Sbjct: 241 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSAD 368
           + +V V  D++ DP   +  + LD    L R L + G YP VDPLAS S  L  +    +
Sbjct: 299 IQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLASTSTALTPEIVGQE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++ + + H++ R+ E +DI  I G     D      V +   I +FL QS
Sbjct: 359 HYEVATEVQHVLQRYRELQDIISILGMDELSDEE-KTIVARARRIQNFLSQS 409


>gi|261367325|ref|ZP_05980208.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
 gi|282570083|gb|EFB75618.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
          Length = 464

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEI 81
           G +  +T     +     +   L + V  Q      + +V +   D V     +   + +
Sbjct: 7   GKVVQVTGPVLDIRFNDGELPALLNAVELQNHGKTLVVEVAQHIGDNVARCIAMAATDGL 66

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   V   G   +       GRV N LG+P+D   +  +      I    P    ++ 
Sbjct: 67  VRGTEAVDTGGPITVPVGDECLGRVFNLLGEPVDEKPA-PENMERWPIHRAAPAFDEQES 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        S+   VGE
Sbjct: 126 STEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIQELIYNIATAHNGYSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R    L+ +T+AEYF   K  +VLL 
Sbjct: 186 RTREGNDLYGEMQESGVLNKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKHQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTQKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A +G YP VDPL S SR+        +  K   
Sbjct: 304 PADDLTDPAPATTFTHLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYKTAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R+++ +DI  I G     +      V++   +  FL QS
Sbjct: 364 AVQQVLQRYKDLQDIIAIMGMDELSEED-KITVNRARKVQRFLSQS 408


>gi|139522565|gb|ABO77673.1| ATP synthase beta subunit [Centropogon baezanus]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|139522559|gb|ABO77669.1| ATP synthase beta subunit [Centropogon granulosus subsp. nutans]
 gi|139522562|gb|ABO77671.1| ATP synthase beta subunit [Centropogon granulosus subsp.
           granulosus]
 gi|139522568|gb|ABO77675.1| ATP synthase beta subunit [Centropogon solanifolius]
 gi|139522571|gb|ABO77677.1| ATP synthase beta subunit [Centropogon solanifolius]
 gi|139522574|gb|ABO77679.1| ATP synthase beta subunit [Siphocampylus tupaeformis]
 gi|139522577|gb|ABO77681.1| ATP synthase beta subunit [Siphocampylus ecuadorensis]
 gi|139522580|gb|ABO77683.1| ATP synthase beta subunit [Siphocampylus ecuadorensis]
 gi|139522583|gb|ABO77685.1| ATP synthase beta subunit [Centropogon sp. UCBG 902279]
 gi|139522586|gb|ABO77687.1| ATP synthase beta subunit [Centropogon tessmannii]
 gi|139522592|gb|ABO77691.1| ATP synthase beta subunit [Siphocampylus giganteus]
 gi|139522598|gb|ABO77695.1| ATP synthase beta subunit [Centropogon sodiroanus]
 gi|139522601|gb|ABO77697.1| ATP synthase beta subunit [Centropogon sodiroanus]
 gi|139522604|gb|ABO77699.1| ATP synthase beta subunit [Centropogon grandidentatus]
 gi|139522607|gb|ABO77701.1| ATP synthase beta subunit [Centropogon llanganatensis]
 gi|139522610|gb|ABO77703.1| ATP synthase beta subunit [Centropogon glabrifilis]
 gi|139522613|gb|ABO77705.1| ATP synthase beta subunit [Centropogon medusa]
 gi|139522616|gb|ABO77707.1| ATP synthase beta subunit [Centropogon salviiformis]
 gi|139522619|gb|ABO77709.1| ATP synthase beta subunit [Centropogon comosus]
 gi|139522622|gb|ABO77711.1| ATP synthase beta subunit [Centropogon nigricans]
 gi|139522634|gb|ABO77719.1| ATP synthase beta subunit [Burmeistera ceratocarpa]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|7708448|emb|CAB89912.1| ATP synthase beta subunit [Ipheion dialystemon]
          Length = 488

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|56477133|ref|YP_158722.1| F0F1 ATP synthase subunit beta [Aromatoleum aromaticum EbN1]
 gi|81357643|sp|Q5P4E2|ATPB_AZOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56313176|emb|CAI07821.1| F1-ATP synthase, beta subunit [Aromatoleum aromaticum EbN1]
          Length = 466

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 106/362 (29%), Positives = 170/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G+   I       GR+++ LG+PID    +   +
Sbjct: 52  LGDGVVRTIAMGSSDGLRRGMKVASTGKGISIPVGHGTLGRIMDVLGRPIDEAGPIEADE 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L   I +K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 LR-PIHAKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 231 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 348

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     +E   +   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 349 QLDPLVVGEEHYNVARQVQVTLQRYKELRDIIAILGMDELS-PEDKLAVSRARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|17548034|ref|NP_521436.1| F0F1 ATP synthase subunit beta [Ralstonia solanacearum GMI1000]
 gi|81592095|sp|Q8XU76|ATPB_RALSO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|17430340|emb|CAD17105.1| probable atp synthase beta chain protein [Ralstonia solanacearum
           GMI1000]
          Length = 467

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+PID    +   D
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMPVSNTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-AAD 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 EKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           AV +   I  FL 
Sbjct: 350 QLDPQIVGTEHYEVARRVQQTLQRYKELRDIIAILGMDELS-PEDKLAVGRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|269798933|gb|ACZ43766.1| ATP synthase beta subunit [Corchoropsis crenata]
          Length = 470

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNLGESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|269798929|gb|ACZ43764.1| ATP synthase beta subunit [Corchoropsis crenata]
          Length = 470

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNLGESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|183206606|gb|ACC54501.1| ATP synthase beta subunit [Prismatocarpus fruticosus]
          Length = 477

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARGRKIERFLSQP 413


>gi|157502825|gb|ABV58376.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007]
 gi|157502828|gb|ABV58378.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007]
 gi|157502831|gb|ABV58380.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007]
 gi|157502834|gb|ABV58382.1| ATP synthase CF1 beta subunit [Lobelia linnaeoides]
 gi|157502837|gb|ABV58384.1| ATP synthase CF1 beta subunit [Lobelia linnaeoides]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + ++ +G   D LGQ I +  ++        V   
Sbjct: 20  SGRIGQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMRESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +   ++   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGDEHYETAQNVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|139522670|gb|ABO77743.1| ATP synthase beta subunit [Burmeistera holm-nielsenii]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|30351889|emb|CAD48097.1| ATP synthase beta subunit [Pseudoprospero firmifolium]
          Length = 493

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 432


>gi|14718020|gb|AAK72751.1| ATP synthase beta subunit [Crossosoma californicum]
          Length = 483

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|14718265|gb|AAK72870.1| ATP synthase beta subunit [Xanthoceras sorbifolium]
          Length = 485

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRVAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTVGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|24940186|emb|CAD43375.1| ATP synthase beta subunit [Heliotropium lasiocarpum]
 gi|24940202|emb|CAD43402.2| ATP synthase beta subunit [Heliotropium messerschmidioides]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|312285255|gb|ADQ64369.1| ATP synthase beta subunit [Pycnarrhena novoguineensis]
          Length = 468

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|170699474|ref|ZP_02890517.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10]
 gi|170135623|gb|EDT03908.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10]
          Length = 464

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 187/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    + +   +  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTANPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESATTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|124361812|gb|ABN09348.1| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 465

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|118917346|dbj|BAF40459.1| ATP synthase beta subunit [Pera heteranthera]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|118917354|dbj|BAF40463.1| ATP synthase beta subunit [Trigonopleura malayana]
          Length = 486

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTLTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|42559046|gb|AAS20209.1| ATP synthase beta subunit [Luzuriaga radicans]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVDTCTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIT 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 DSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|158321580|ref|YP_001514087.1| F0F1 ATP synthase subunit beta [Alkaliphilus oremlandii OhILAs]
 gi|172048246|sp|A8MJV9|ATPB_ALKOO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158141779|gb|ABW20091.1| ATP synthase F1, beta subunit [Alkaliphilus oremlandii OhILAs]
          Length = 464

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/396 (28%), Positives = 185/396 (46%), Gaps = 15/396 (3%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
           +  +G +   + +V   I  D V    +   + +  G      G    +       GR+ 
Sbjct: 33  IEIEGPDGKIVVEVSQHIGDDTVRCVAMKSTDGLVRGMEAKDTGGPITVPVGRATLGRIF 92

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+P+D   ++   +    I    P   ++    +  +TGI+V+D+  P   G +IG+
Sbjct: 93  NVIGEPVDEKGAV-AAEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAPYLKGGKIGL 151

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           F G+G+GK+ L+     +   +     + S VGER RE  +   + +    + K+ +V  
Sbjct: 152 FGGAGVGKTVLIMELINNIAKEHGGLSVFSGVGERTREGNDLYNEMIESGVIDKTALVYG 211

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +E P  R    LT +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A G
Sbjct: 212 QMNEPPGARMRVGLTGLTMAEHFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG 271

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R 
Sbjct: 272 YQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQ 329

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           + E G YP VDPL S SR+ D A   DE   +   +  ++ R++E +DI  I G     D
Sbjct: 330 IVELGIYPAVDPLDSNSRVLDPAIVGDEHYSVARGVQEVLQRYKELQDIIAILGMDELSD 389

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
                 V +   I  FL Q     S  + F  +  K
Sbjct: 390 ED-KLTVSRARKIQRFLSQP---FSVAEQFTGMAGK 421


>gi|75338403|sp|Q9TMQ4|ATPB_ORNLO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5758903|gb|AAD50877.1| ATP synthase beta subunit [Ornithogalum longebracteatum]
 gi|30351883|emb|CAD48093.1| ATP synthase beta subunit [Stellarioides sp. MP H608]
          Length = 495

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|297837977|ref|XP_002886870.1| ATPase subunit I [Arabidopsis lyrata subsp. lyrata]
 gi|297332711|gb|EFH63129.1| ATPase subunit I [Arabidopsis lyrata subsp. lyrata]
          Length = 431

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 157/354 (44%), Gaps = 10/354 (2%)

Query: 75  VGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G G  I  G  V   G+  +I  S  + GRVINAL  PIDG   +   +  + I S  P
Sbjct: 1   MGDGLMIQEGSSVKATGKIAQIPVSEAYLGRVINALANPIDGRGKISASESRL-IESPAP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI-- 191
             ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    +     VI  
Sbjct: 60  GIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICV 119

Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + +           ++VV  T+D    L+ +AP T   +AEYF  +  
Sbjct: 120 YVAIGQKASSVAQVVTSLQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYREQ 179

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    YP  VF    RLLER      +  +G++T
Sbjct: 180 HTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMT 239

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  V     + +  I  +V SI DG I L+  L   G  P ++   SVSR+   A    
Sbjct: 240 ALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKA 299

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            K++   L   + +F E         +   +D      + +   + + LKQS S
Sbjct: 300 MKQVAGKLKLELAQFAELE---AFAQFSSDLDKATQNQLARGQRLRELLKQSQS 350


>gi|294679037|ref|YP_003579652.1| flagellar protein export ATPase FliI [Rhodobacter capsulatus SB
           1003]
 gi|294477857|gb|ADE87245.1| flagellar protein export ATPase FliI [Rhodobacter capsulatus SB
           1003]
          Length = 440

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 159/415 (38%), Positives = 241/415 (58%), Gaps = 3/415 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDI 69
            AE      V   G +  +      V+ L+    LGD      ++    G +VI +    
Sbjct: 10  QAEIADLGAVHPVGRVFEVGKGTIEVSGLTTRATLGDRARIHAQSGPVFGAEVIALRRGA 69

Query: 70  VYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
           V +      E +++GD V   G+  I+P   W GR+++  G+P+DG   L +G     I 
Sbjct: 70  VTLLADCAVEGVAIGDRVEVLGQAGIAPDDSWIGRIVDPFGRPLDGR-PLLRGGHDRNIR 128

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           +  PPA  R+R+ +  +TG+   +   PL  GQRIG+FAGSG+GKS+LL+ FA+    D 
Sbjct: 129 ATPPPAAFRRRLGERVETGLDAFNTLLPLVRGQRIGLFAGSGVGKSSLLAKFAKGVAADV 188

Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           V+I+L+GERGRE+REF+E  LG + + +SV+V ATSD+SP++R+     A+T+AEYF  +
Sbjct: 189 VVIALIGERGRELREFVEKTLGPEGMARSVIVAATSDQSPLVRRRCGWAAMTVAEYFRDQ 248

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL + DS+TRFA + RE+A  +GE P  RGYP S   ++  L ER GP  +  G+IT
Sbjct: 249 GKHVLFLADSVTRFAEAHREVALAAGEPPSLRGYPPSTSHQIMSLAERSGPGMEGAGDIT 308

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           AV SVLV G +  +P+AD +R  LDGH+VL+R +AE GR+P +D L SVSR   +A +  
Sbjct: 309 AVFSVLVAGSDMEEPVADILRGTLDGHVVLDRGIAERGRFPAIDLLRSVSRSLPEAATPA 368

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
           E +L++    L+  ++    +   G Y  G D ++D A+   P +  FL +  +D
Sbjct: 369 ENELIAKARKLLGAYDRAEMMIQAGLYAAGSDPVIDAAIKVWPALDGFLARDAAD 423


>gi|194770714|ref|XP_001967434.1| GF21882 [Drosophila ananassae]
 gi|190618410|gb|EDV33934.1| GF21882 [Drosophila ananassae]
          Length = 506

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 192/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +    +    + +V   +  + V    +   E +
Sbjct: 38  NGKIVAVIGAVVDVQFDDNLPPILNALEVDNRTPRLVLEVAQHLGENTVRTIAMDGTEGL 97

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI   A   GR+IN +G+PID    +   D +  I ++ P  +    
Sbjct: 98  VRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSV 156

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 157 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 216

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 217 RTREGNDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 276

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 277 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITS 334

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 335 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQE 394

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 395 HYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 450

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 451 VFTGHAGKL 459


>gi|186886217|gb|ACC93511.1| ATPase F1 alpha subunit [Luzula canariensis]
          Length = 355

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 2   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 62  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 120

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 121 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 181 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 240

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 241 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 300

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 301 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 352


>gi|113197030|gb|AAQ74506.2| F1-ATPase alpha subunit [Cephalostemon flavus]
          Length = 418

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 91/409 (22%), Positives = 162/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG PIDG  +L   +    +  K P  + R+       
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVXVKAPGIIERKSXHXPMX 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFA-----------GSGIGKSTLLSMFARSDCFDKVIISLV 195
           TG++ +D   P+  G R  +F             + +    ++S  A        +   +
Sbjct: 117 TGLKAVDSLVPIGXGXRXLIFGXRXXXXTAXAXDTXLXXXQMISRAASDSESLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G     V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GXXRSTVAQLVQXLSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--EKGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER          G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDLTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|37720979|gb|AAN32492.1| ATP synthase beta subunit [Asphodelus albus]
          Length = 497

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYVEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF       VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQXVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|91208995|ref|YP_538855.1| ATP synthase CF1 beta subunit [Solanum bulbocastanum]
 gi|118573749|sp|Q2MII0|ATPB_SOLBU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|84371902|gb|ABC56220.1| ATP synthase CF1 beta subunit [Solanum bulbocastanum]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMAVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|62085112|gb|AAX62962.1| ATP synthase beta subunit [Codiaeum variegatum]
          Length = 482

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|58268632|ref|XP_571472.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134113416|ref|XP_774733.1| hypothetical protein CNBF4120 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257377|gb|EAL20086.1| hypothetical protein CNBF4120 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227707|gb|AAW44165.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 547

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 120/454 (26%), Positives = 196/454 (43%), Gaps = 28/454 (6%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQ---------YVCLGDFVVHQGKN 55
               A  A  Y+    +Q G I ++      V   S           V  G+        
Sbjct: 53  PAKAANAARTYATPAGLQTGSIKTVIGAVVDVHFDSDNLPPILNALDVQFGEGQTAPEGG 112

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
              L     +  + V    +   + +  G  V   G   +I       GR++N +G+PID
Sbjct: 113 RLVLEVAQHLGENTVRCIAMDGTDGLVRGQKVVDTGAPIKIPVGPAALGRIMNVIGQPID 172

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               + KG     I +  PP +++    +  +TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 173 QRGPI-KGVREAPIHADAPPFVDQSTQAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGK 231

Query: 175 STLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSD 225
           + L+     +        S+   VGER RE  +   +         +   K  +V    +
Sbjct: 232 TVLIQELINNIAKAHGGYSVFTGVGERTREGNDLYHEMRETGVINLEGDSKVALVFGQMN 291

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 292 EPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 351

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+RS+AE
Sbjct: 352 TLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAE 409

Query: 345 EGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPL S SR+ D          + +    ++  ++  +DI  I G     +   
Sbjct: 410 LGIYPAVDPLDSKSRMLDPRVVGQRHYDIATKTQQILQSYKSLQDIIAILGMDELSEED- 468

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              V +   I  F+ Q     +   VF  I  +L
Sbjct: 469 KLTVERARKIQRFMSQP---FAVAQVFTGIEGRL 499


>gi|330719705|gb|EGG98244.1| ATP synthase alpha chain [gamma proteobacterium IMCC2047]
          Length = 514

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 98/442 (22%), Positives = 179/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   ++          G I +++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPAEISEIIKQRIESADVTSEARNEGTIVNVSDGVIRIHGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G   E+S G      GR   +       GRV+NALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAIVLGDYMELSEGMTARCTGRILEVPVGPELEGRVVNALGMPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    L+  +    P  + R+ V++  + G++VID   P+  GQR  +     IGK+
Sbjct: 119 RGPVNAA-LTDAVEKVAPGVIARKSVDQPVQIGLKVIDTMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      K I   VG++   V   +           + VV A + +   ++ 
Sbjct: 178 AVAIDAIINQKGTGVKCIYVAVGQKASSVAAVVRKLEEHGAMGHTTVVAANASDPASMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    ++ EY+  +G++ L+I D +T+ A + R+I+      P    YP  +F    R
Sbjct: 238 LAPFAGCSMGEYYRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDLFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNEEYVENFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A S   KKL   +   + ++ E   +     +   +
Sbjct: 358 ADMFNAGIRPAMNAGVSVSRVGGSAQSKIVKKLSGGIRTSLAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D      +     + + +KQ  
Sbjct: 415 DEATKAQLDHGERVTELMKQKQ 436


>gi|327482893|gb|AEA86203.1| F0F1 ATP synthase subunit alpha [Pseudomonas stutzeri DSM 4166]
          Length = 514

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 95/442 (21%), Positives = 184/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   +           G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKQRIEKSDVAAQARNEGTVVSVSDGIVRIYGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -IFGMALNLEQDSVGAVVLGNYLGLTEGMSAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPIN-AQATDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +   + +   +G++   +   +         + ++VV A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKNSGIRCVYVAIGQKQSTIANVVRKLEEHGALQNTIVVAASASESAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNAGIRPAVNAGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|312285217|gb|ADQ64350.1| ATP synthase beta subunit [Curarea candicans]
          Length = 469

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P  +   
Sbjct: 63  LTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSCTTS-PIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|146284504|ref|YP_001174657.1| F0F1 ATP synthase subunit alpha [Pseudomonas stutzeri A1501]
 gi|158514122|sp|A4VS64|ATPA_PSEU5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|145572709|gb|ABP81815.1| ATP synthase F1, alpha subunit [Pseudomonas stutzeri A1501]
          Length = 514

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 95/442 (21%), Positives = 184/442 (41%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   +           G + S++     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISEIIKQRIEKSNVAAQARNEGTVVSVSDGIVRIYGLAD-VMYGEMIEFPGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -IFGMALNLEQDSVGAVVLGNYLGLTEGMSAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPIN-AQATDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L   ++  + +   + +   +G++   +   +         + ++VV A++ ES  L+ 
Sbjct: 178 ALAIDAIINQKNSGIRCVYVAIGQKQSTIANVVRKLEEHGALQNTIVVAASASESAALQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNAGIRPAVNAGISVSRVGGAAQTKIVKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|91983091|gb|ABE68642.1| ATP synthase subunit B [Physocarpus opulifolius]
          Length = 482

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDAVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|50424093|ref|XP_460631.1| DEHA2F06226p [Debaryomyces hansenii CBS767]
 gi|49656300|emb|CAG88959.1| DEHA2F06226p [Debaryomyces hansenii]
          Length = 503

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/428 (25%), Positives = 185/428 (43%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G + ++      +          L    +  G     L     +  + V    +   + +
Sbjct: 36  GKVRAVIGAVVDIQFDEGNLPAILNALTLKNGDQDLVLEVAQHLGENTVRAIAMDGTDGL 95

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+IN +G+PID    + K      I +  P  + +  
Sbjct: 96  VRGAPVNDTGAPISVPVGRETLGRIINVIGEPIDERGPI-KTKQKNPIHADPPSFVEQST 154

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +         + + VGE
Sbjct: 155 SSEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAGVGE 214

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +   
Sbjct: 215 RTREGNDLYREMQETGVINLEGDSKVSLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQ 274

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V
Sbjct: 275 DVLLFVDNIYRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSV 332

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADE 369
            +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D      + 
Sbjct: 333 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDIAVVGKEH 392

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +V
Sbjct: 393 YDVASGVQQTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAEV 448

Query: 430 FQEITKKL 437
           F  I  KL
Sbjct: 449 FTGIPGKL 456


>gi|7708468|emb|CAB89924.1| ATP synthase beta subunit [Lactoris fernandeziana]
          Length = 491

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   +N+GQ I +  ++        V    
Sbjct: 14  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RENIGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNLTESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|330447618|ref|ZP_08311266.1| ATP synthase F1, alpha subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491809|dbj|GAA05763.1| ATP synthase F1, alpha subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 513

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 97/443 (21%), Positives = 184/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L                 G I S++     +  L+  V  G+ +      
Sbjct: 1   MQLNSNEISDLIRQRIATFNVTSQARNEGTIVSVSDGIIVINGLAD-VMQGEMIELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   +++ G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRYALALNLERHSVGAVVMGPYADLAEGMKVTGTGRILEVPVGKGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFAPVEIIAPGVIDRKSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + +     +   +G++   +   +     +   K ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKESGIYSVYVAIGQKASTIANVVRKLEENGALKNTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNAEYVERFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTNLFNAGLRPAVDPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDDATRKQLDHGEKVTELMKQKQ 435


>gi|263359637|gb|ACY70473.1| hypothetical protein DVIR88_6g0010 [Drosophila virilis]
          Length = 526

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 194/429 (45%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +    ++   + +V   +  + V    +   E +
Sbjct: 58  NGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 117

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI   A   GR++N +G+PID    +     S  I ++ P  ++   
Sbjct: 118 VRGQKVLDTGSPIRIPVGAETLGRIMNVIGEPIDERGPIPSAKTS-PIHAEAPEFVDMSV 176

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P C G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 177 EQEILVTGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 236

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 237 RTREGNDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEG 296

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 297 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 354

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 355 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQE 414

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 415 HYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 470

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 471 VFTGHAGKL 479


>gi|238764900|ref|ZP_04625840.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
 gi|238696919|gb|EEP89696.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638]
          Length = 454

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 161/446 (36%), Positives = 243/446 (54%), Gaps = 16/446 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L +L +  E  S++  + + G ++  T +    T L   + LG   + +    G+  +  
Sbjct: 9   LTSLDKFEERISQSTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDNGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+     G      ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARITTGGTSASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + SS +   +  K L
Sbjct: 426 QMEIFLQQGMYERSSYEDACQHLKSL 451


>gi|219552260|gb|ACL26845.1| ATP synthase beta chain [Phyllanthus ussuriensis]
          Length = 423

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 59  MSATEGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPV-ETRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|38531948|gb|AAR23266.1| atpB [Peridiscus lucidus]
          Length = 487

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|6687333|emb|CAB64912.1| ATP synthase beta subunit [Campsis radicans]
 gi|6689560|emb|CAB65487.1| ATP synthase beta subunit [Veronica anagallis-aquatica]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 21  GRIVQIIGPVLNVAFPPGKMPNIYNALVVKG--RDTVGQKMNVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|300904831|ref|ZP_07122657.1| flagellar protein export ATPase FliI [Escherichia coli MS 84-1]
 gi|301305284|ref|ZP_07211381.1| flagellar protein export ATPase FliI [Escherichia coli MS 124-1]
 gi|300403258|gb|EFJ86796.1| flagellar protein export ATPase FliI [Escherichia coli MS 84-1]
 gi|300839490|gb|EFK67250.1| flagellar protein export ATPase FliI [Escherichia coli MS 124-1]
 gi|315257227|gb|EFU37195.1| flagellar protein export ATPase FliI [Escherichia coli MS 85-1]
          Length = 457

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 160/441 (36%), Positives = 240/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAITALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|183206514|gb|ACC54455.1| ATP synthase beta subunit [Codonopsis kawakamii]
          Length = 478

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 1   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|195183529|dbj|BAG66977.1| ATP synthase beta subunit [Paypayrola grandiflora]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|189485469|ref|YP_001956410.1| F0F1-type ATP synthase alpha subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287428|dbj|BAG13949.1| F0F1-type ATP synthase alpha subunit [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 513

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/450 (25%), Positives = 185/450 (41%), Gaps = 25/450 (5%)

Query: 4   NLETLAQLAE-----DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
             E + Q  E        K  ++  G I ++       + LS      + +  +    ++
Sbjct: 2   KPEEIIQKIEKELYSTQVKPELINFGVIETVGDEIVKASGLS-NAGYYEEIEFE---DES 57

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G V+ I+ D V I  +     I  G  V   G+   I+ S    GRVIN LG+PIDG++
Sbjct: 58  IGFVLNIDEDYVSIVLLKNSGHIVRGMKVKSTGKVLSIAVSYKLIGRVINTLGQPIDGNE 117

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                 +   +    P  + R  V+   KTGI+ ID  TP+  GQR  +    G GK+ +
Sbjct: 118 LKHIDSVHYPVEKIAPGIIQRNSVDNPLKTGIKAIDAMTPIGRGQRELIIGDRGTGKTAI 177

Query: 178 LSMFARSDCF-------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
                 +             I   +G++   +         +     +VV+ AT+ E   
Sbjct: 178 AVDTIINQKKLDMGLKSVICIYCSIGQKKSNLASITAKLKEEGAMDYTVVIAATASEPAS 237

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           ++ +APL A  I EYF  KG +VL++ D +T+ A + R+I+           YP  +F  
Sbjct: 238 MQYIAPLAACAIGEYFMDKGKDVLVVYDDLTKHAWAYRQISLLIKRPAGREAYPGDIFYL 297

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +   G +TA+  +   G++ +  I  +V SI DG I L   L   G 
Sbjct: 298 HSRLLERAARMSDKNGGGTLTALPIIETQGNDMSAYIPTNVVSITDGQIYLEADLFNSGI 357

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A +   K+L   +   + +F E +       +   +D    K +
Sbjct: 358 RPAINVGLSVSRVGGAAQTKSMKQLAGPVRLELSQFRELQ---SFTQFGSDLDEYALKRL 414

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +   I + LKQ        D   EI    
Sbjct: 415 ERGKRITEILKQQQ--YKPYDEISEILSIF 442


>gi|139522637|gb|ABO77721.1| ATP synthase beta subunit [Burmeistera multiflora]
 gi|139522640|gb|ABO77723.1| ATP synthase beta subunit [Burmeistera multiflora]
 gi|139522646|gb|ABO77727.1| ATP synthase beta subunit [Burmeistera crispiloba]
 gi|139522649|gb|ABO77729.1| ATP synthase beta subunit [Burmeistera crispiloba]
 gi|139522652|gb|ABO77731.1| ATP synthase beta subunit [Burmeistera crispiloba]
 gi|139522655|gb|ABO77733.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522658|gb|ABO77735.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522661|gb|ABO77737.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522664|gb|ABO77739.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522667|gb|ABO77741.1| ATP synthase beta subunit [Burmeistera sodiroana]
 gi|139522673|gb|ABO77745.1| ATP synthase beta subunit [Burmeistera rubrosepala]
 gi|139522682|gb|ABO77751.1| ATP synthase beta subunit [Burmeistera oyacachensis]
 gi|139522685|gb|ABO77753.1| ATP synthase beta subunit [Burmeistera borjensis]
 gi|139522688|gb|ABO77755.1| ATP synthase beta subunit [Burmeistera refracta]
 gi|139522691|gb|ABO77757.1| ATP synthase beta subunit [Burmeistera refracta]
 gi|139522694|gb|ABO77759.1| ATP synthase beta subunit [Burmeistera refracta]
 gi|139522697|gb|ABO77761.1| ATP synthase beta subunit [Burmeistera glabrata]
 gi|139522700|gb|ABO77763.1| ATP synthase beta subunit [Burmeistera cylindrocarpa]
 gi|139522703|gb|ABO77765.1| ATP synthase beta subunit [Burmeistera cylindrocarpa]
 gi|139522709|gb|ABO77769.1| ATP synthase beta subunit [Burmeistera resupinata subsp.
           resupinata]
 gi|139522718|gb|ABO77775.1| ATP synthase beta subunit [Burmeistera succulenta]
 gi|139522721|gb|ABO77777.1| ATP synthase beta subunit [Burmeistera succulenta]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|156530111|gb|ABU75152.1| AtpB [Brucea javanica]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ + +  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTXMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|91983999|ref|YP_567083.1| ATP synthase CF1 beta subunit [Vitis vinifera]
 gi|118573777|sp|Q0ZJ13|ATPB_VITVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|91701657|gb|ABE47541.1| ATP synthase CF1 beta subunit [Vitis vinifera]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|195183486|dbj|BAG66958.1| ATP synthase beta subunit [Fusispermum laxiflorum]
 gi|195183489|dbj|BAG66959.1| ATP synthase beta subunit [Fusispermum minutiflorum]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVDFPPGKMPNIYNALVIKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|157689146|gb|ABV65129.1| ATP synthase CF1 beta subunit [Cornus florida]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 79  MSATEGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|150251476|ref|YP_001312209.1| ATP synthase CF1 beta chain [Cycas taitungensis]
 gi|190358665|sp|A6H5I4|ATPB_CYCTA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|149941526|dbj|BAF64950.1| ATP synthase CF1 beta chain [Cycas taitungensis]
 gi|156597989|gb|ABU85261.1| ATP synthase CF1 beta subunit [Cycas micronesica]
          Length = 492

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I   V   V        + + ++ +GK  D  GQ I +  ++        V    
Sbjct: 19  GHIVQIIGPVLDVVFSPGNMPNILNSLIIKGK--DTAGQEINVTCEVQQLLGNNKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 77  MSATDGLKRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-ARTTSPIHRPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +     +         K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYVEMKESGVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|21633439|gb|AAM52194.1| ATP synthase beta subunit [Cardiochlamys madagascariensis]
          Length = 487

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 182/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V QG+ ++   +V ++  +  V    +     +
Sbjct: 21  GRIVQIIGPVLDVAFPPGKLPFIYNALVVQGRETNVTCEVQQLLGNNRVRAVAMSDTNGL 80

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LGKP+D    +   + +  I    P  +    
Sbjct: 81  MRGLEVIDTGAPISVPVGGSTLGRIFNVLGKPVDNLGPVD-TNTTSPIHRSAPAFIQLDT 139

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 140 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 199

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 200 RTREGNDLYMEMKESGVINEETIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 259

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 260 EQDVLLFIDNIFRFVQAGSEVSALLGXMPSAVGYRPTLSTEMGTLQERI--TSTKEGSIT 317

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 318 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 377

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|21684909|emb|CAD11581.1| ATP synthase beta subunit [Pharus parvifolius]
          Length = 481

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 114/423 (26%), Positives = 180/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I  I      VT     +       VV   K+ D  G+ I +  ++        V 
Sbjct: 13  STGRIDQIIGPVLDVTFPPGKLPYIYNALVV---KSRDTAGKQINVTCEVQQLLGNNRVR 69

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 70  AVAMSATEGLMRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHR 128

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 129 SAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 188

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 189 GVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTAL 248

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 249 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 307

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 308 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 366

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 367 TMLQPRVVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 425

Query: 418 KQS 420
            Q 
Sbjct: 426 SQP 428


>gi|167856121|ref|ZP_02478862.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755]
 gi|167852762|gb|EDS24035.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755]
          Length = 457

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVETGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P   ++
Sbjct: 59  GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEDQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 ANSTELLETGIKVIDLIAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQKTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|113910824|gb|ABI48144.1| ATPase beta subunit [Blasia pusilla]
          Length = 461

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 108/394 (27%), Positives = 175/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           ++ QG+NS   GQ I +  ++        V    +   + +  G  V   G    +    
Sbjct: 14  LIVQGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVTDTGGPLSVPVGE 71

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P           F+TGI+V+D+  P  
Sbjct: 72  ATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 130

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 131 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 190

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 191 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 250

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 251 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 308

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 309 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKEL 368

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|8517656|emb|CAB94375.1| ATP synthase beta subunit [Polygala cruciata]
          Length = 481

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVQG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYTEMKESGVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGDEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21684869|emb|CAD11561.1| ATP synthase beta subunit [Anarthria scabra]
          Length = 491

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGELPNIYNALVVQG--RDLVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LGKP+D    +     S  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGKPVDNLGPVDTSTTS-PIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYIEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNKLNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKGGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGNEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|62085163|gb|AAX62986.1| ATP synthase beta subunit [Microdesmis puberula]
          Length = 482

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|229593481|ref|YP_002875600.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens SBW25]
 gi|259585448|sp|C3K1E6|ATPB_PSEFS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|229365347|emb|CAY53725.1| ATP synthase beta chain [Pseudomonas fluorescens SBW25]
          Length = 458

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 187/408 (45%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G D+V       +       GR+++ LG PID    +   +    I    P    +
Sbjct: 60  GLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEE-RWGIHRPAPSFAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVSRARKIQRFLSQP 402


>gi|155029369|dbj|BAF75569.1| ATP synthase beta subunit [Hippomane mancinella]
          Length = 488

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|61968289|gb|AAX57071.1| ATP synthase beta subunit [Phyllanthus cf. fuscoluridus Hoffmann et
           al. 246]
          Length = 479

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|5001567|gb|AAD37030.1|AF092104_1 ATP synthase beta subunit [Liquidambar styraciflua]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|1168569|sp|P42006|ATPB_BACST RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|534854|dbj|BAA07255.1| ATPase subunit beta [Geobacillus stearothermophilus]
          Length = 473

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G            GRV N LG+PID +  + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISRPVGEVTLGRVFNVLGEPIDLEGDIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+VID+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDPIHRPAPKFEELATEVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + +  GER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGFGERTREGNDLYHEMKDSGVISKTGMVFGQMNEPPGPRMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+  RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNNFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPLA
Sbjct: 291 RI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|312285277|gb|ADQ64380.1| ATP synthase beta subunit [Tiliacora acuminata]
          Length = 467

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|242371594|ref|ZP_04817168.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis
           M23864:W1]
 gi|242350661|gb|EES42262.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis
           M23864:W1]
          Length = 470

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 184/410 (44%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V         +     G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPDINNALHIEVPKEDGTLHLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G+   +       GRV N LG+ ID D+ +        I  + P   
Sbjct: 64  TDGVQRGMEVKNTGKDISVPVGDATLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  S   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 DVAREVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|157502879|gb|ABV58412.1| ATP synthase CF1 beta subunit [Lobelia arnhemiaca]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + +V +G   D LGQ I +  ++        V   
Sbjct: 20  SGRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMRESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +   ++   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGDEHYETAQNVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|155029371|dbj|BAF75570.1| ATP synthase beta subunit [Homalanthus nutans]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|4995798|emb|CAB44271.1| H(+)-transporting ATP synthase [Schoutenia glomerata]
          Length = 482

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 35  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 95  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 153

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 154 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 213

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 214 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 274 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 332 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 391

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 392 ILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|7708546|emb|CAB89971.1| ATP synthase beta subunit [Platytheca verticillata]
          Length = 474

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIS 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLIVARARKIERFLSQP 413


>gi|83944173|ref|ZP_00956629.1| flagellum-specific ATP synthase [Sulfitobacter sp. EE-36]
 gi|83845040|gb|EAP82921.1| flagellum-specific ATP synthase [Sulfitobacter sp. EE-36]
          Length = 463

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 172/428 (40%), Positives = 249/428 (58%), Gaps = 4/428 (0%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M      L +    YS       G + SIT +  TV+ L     +G             G
Sbjct: 1   MTSAFANLQKSI--YSCASAKISGTVRSITGMTLTVSGLEAMAAIGSQCRVYTPAGHIDG 58

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +V+      + + P G  E +S+G+ V        +SP   W G V++ALG+P+      
Sbjct: 59  EVVSAQGSDLCVLPFGTWEGVSVGNTVELIEHDDMVSPDDSWIGTVVDALGRPLTQYTRA 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +        +  P A +R++V +  +T I+ IDIFTP+C GQR+GVFAGSG+GKST+++
Sbjct: 119 RRPRRKTRFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKSTMMA 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D ++I L+GERGREV++FI++    + + ++VVVV+T DE+P+LRK A LT 
Sbjct: 179 MLARNTDADVIVIGLIGERGREVQQFIQEDLGEEGMARAVVVVSTGDEAPLLRKQAALTT 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF S G  VLL+LDS+TRFA + REI    GE P  RGYP SVFSELP LLER G
Sbjct: 239 TAIAEYFKSTGKQVLLLLDSVTRFAMAQREIGLARGEPPTLRGYPPSVFSELPHLLERAG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P    +G+IT + +VLVDGD+ N+PIAD+VR I+DGH+VL+R +AE+GR+P +D   S+S
Sbjct: 299 PGMAAEGDITGLYTVLVDGDDMNEPIADAVRGIVDGHLVLDRRIAEQGRFPAIDLQKSLS 358

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+     S +E ++       + R+ +  D+  +G Y+ G D   D+A+        FL 
Sbjct: 359 RMLPGCHSPEEYEITKVARKALGRYADMEDLIRLGAYKAGSDPETDQAITFFQAASPFLS 418

Query: 419 QSPSDLSS 426
           QS  D + 
Sbjct: 419 QSRGDKTP 426


>gi|186886223|gb|ACC93514.1| ATPase F1 alpha subunit [Luzula purpureosplendens]
          Length = 357

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 124 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 183

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 184 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 243

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 244 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 303

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 304 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 355


>gi|156530175|gb|ABU75184.1| AtpB [Samadera indica]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VL+ +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLVFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|119367988|dbj|BAF40476.1| ATP synthase beta subunit [Hura crepitans]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119367976|dbj|BAF40466.1| ATP synthase beta subunit [Codiaeum peltatum]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917426|dbj|BAF40529.1| ATP synthase beta subunit [Agation deplanchei]
 gi|195183466|dbj|BAG66949.1| ATP synthase beta subunit [Agatea schlechteri]
 gi|195183468|dbj|BAG66950.1| ATP synthase beta subunit [Agatea veillonii]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFRPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTCTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|115564921|emb|CAJ70591.1| ATP synthase beta subunit [Loropetalum chinense]
          Length = 466

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|3850918|gb|AAC72151.1| ATP synthase beta subunit [Synaphea media]
          Length = 490

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDXLSEED-RLXVARARKIERFLSQP 426


>gi|30248230|ref|NP_840300.1| F0F1 ATP synthase subunit beta [Nitrosomonas europaea ATCC 19718]
 gi|81838782|sp|Q82XP8|ATPB_NITEU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|30180115|emb|CAD84117.1| FoF1-type ATP synthase beta subunit [Nitrosomonas europaea ATCC
           19718]
          Length = 460

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 116/405 (28%), Positives = 186/405 (45%), Gaps = 11/405 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           QG  +  I +V        +   + D +V +G       Q  ++   +V    +G  + +
Sbjct: 4   QGKIVQCIGAVIDVEFTPGEIPKVYDALVMEGSELTLEVQ-QQLGDGVVRTIALGSSDGL 62

Query: 82  SLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G +V +   +  +       GR+++ LG+PID    +G   L M I    P       
Sbjct: 63  RRGMMVTNTQKQISVPVGTKTLGRIMDVLGRPIDEMGEIGANSL-MPIHRAAPAFDELSA 121

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+  +    R+   +     + + VGE
Sbjct: 122 STELLETGIKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 181

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  +
Sbjct: 182 RTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFV 241

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  S+   G+IT++ +V V 
Sbjct: 242 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERITSSKT--GSITSIQAVYVP 299

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSS 375
            D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      D       
Sbjct: 300 ADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLIIGEDHYNTARE 359

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 360 VQQTLQRYKELRDIIAILGMDELS-PEDKLSVSRARKIQRFLSQP 403


>gi|312285179|gb|ADQ64331.1| ATP synthase beta subunit [Albertisia laurifolia]
 gi|312285181|gb|ADQ64332.1| ATP synthase beta subunit [Albertisia porcata]
 gi|312285197|gb|ADQ64340.1| ATP synthase beta subunit [Beirnaertia cabindensis]
 gi|312285203|gb|ADQ64343.1| ATP synthase beta subunit [Carronia protensa]
 gi|312285209|gb|ADQ64346.1| ATP synthase beta subunit [Chondrodendron tomentosum]
 gi|312285263|gb|ADQ64373.1| ATP synthase beta subunit [Sciadotenia amazonica]
 gi|312285265|gb|ADQ64374.1| ATP synthase beta subunit [Sciadotenia toxifera]
 gi|312285285|gb|ADQ64384.1| ATP synthase beta subunit [Triclisia dictyophylla]
          Length = 469

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|308183513|ref|YP_003927640.1| flagellum-specific ATP synthase [Helicobacter pylori PeCan4]
 gi|308065698|gb|ADO07590.1| flagellum-specific ATP synthase [Helicobacter pylori PeCan4]
          Length = 434

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 159/423 (37%), Positives = 232/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   S+ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID   +L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|298370407|ref|ZP_06981723.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281867|gb|EFI23356.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 465

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 183/413 (44%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +   +N+  L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDAIPHVYDALKLDENNLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   +    I    P     
Sbjct: 60  GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPID-TNKHRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SATTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|257853460|gb|ACV71732.1| ATP synthase beta subunit [Dianella intermedia]
 gi|257853462|gb|ACV71733.1| ATP synthase beta subunit [Dianella montana]
 gi|257853464|gb|ACV71734.1| ATP synthase beta subunit [Dianella revoluta]
 gi|257853466|gb|ACV71735.1| ATP synthase beta subunit [Dianella sandwicensis]
 gi|257853468|gb|ACV71736.1| ATP synthase beta subunit [Dianella tasmanica]
 gi|257853470|gb|ACV71737.1| ATP synthase beta subunit [Eccremis coarctata]
          Length = 479

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|164688908|ref|ZP_02212936.1| hypothetical protein CLOBAR_02556 [Clostridium bartlettii DSM
           16795]
 gi|164602112|gb|EDQ95577.1| hypothetical protein CLOBAR_02556 [Clostridium bartlettii DSM
           16795]
          Length = 463

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 116/410 (28%), Positives = 190/410 (46%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
              G I SI  V   V   ++     L + +V +  + + + +V   I  D V    +  
Sbjct: 2   ANVGKIVSIVGVVLDVKFENEQSLPNLLNALVIKLGDQEIVAEVAQHIGDDTVRCIAMSA 61

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GR+ N LG+P+DG ++  K      I    P   
Sbjct: 62  TDGLVRGMEVIDTGKPIAVPVGDKTLGRIFNVLGEPVDGFEA-PKDAPRDPIHRPAPEFN 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + S
Sbjct: 121 EIAGSAEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNVAKQHGGISVFS 180

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
            VGER RE  +   +     +  K+ +V    +E P  R    L+ +T+AEYF   +  +
Sbjct: 181 GVGERTREGNDLYFEMKESGVLNKTALVFGQMNEPPGARMRVALSGLTMAEYFRDKENQD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V 
Sbjct: 241 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD   VL+RS+A  G YP VDPL S SR+ D      +  
Sbjct: 299 AVYVPADDLTDPAPATTFTHLDAKTVLSRSIASLGIYPAVDPLESTSRVLDPNIVGEEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 359 AVARGVQSILQRYKELQDIIAILGMDELGDED-KLIVARARKIQRFLSQP 407


>gi|119367974|dbj|BAF40457.1| ATP synthase beta subunit [Mercurialis leiocarpa]
          Length = 489

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708568|emb|CAB89973.1| ATP synthase beta subunit [Quisqualis indica]
          Length = 483

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQXINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 68  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|4995109|emb|CAB44011.1| H(+)-transporting ATP synthase [Dais cotinifolia]
          Length = 484

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGSTLGRIFNVLGEPIDNLGPVD-TRTTSPIHKSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|91214126|ref|YP_538748.1| ATP synthase CF1 beta subunit [Glycine max]
 gi|118573752|sp|Q2PMV0|ATPB_SOYBN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|83595727|gb|ABC25108.1| ATP synthase CF1 beta subunit [Glycine max]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        +    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRIRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATEGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|50346789|ref|YP_053162.1| ATP synthase CF1 beta subunit [Nymphaea alba]
 gi|75323455|sp|Q6EW72|ATPB_NYMAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50250334|emb|CAF28600.1| ATPase beta subunit [Nymphaea alba]
          Length = 498

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 181/429 (42%), Gaps = 31/429 (7%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI---- 69
           S  +    G I+ I      V      +       VV   K  D  GQ I +  ++    
Sbjct: 13  STLVEKNQGRIAQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTAGQEINVTCEVQQLL 69

Query: 70  ----VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     
Sbjct: 70  GNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRT 128

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 129 TSPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 188

Query: 185 DCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKM 233
                  +S+ G   ER RE  +   +               K  +V    +E P  R  
Sbjct: 189 IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMR 248

Query: 234 APLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  
Sbjct: 249 VGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGS 308

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VD
Sbjct: 309 LQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVD 366

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S S +        +  +    +   + R++E +DI  I G     +      V +  
Sbjct: 367 PLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARAR 425

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 426 KIERFLSQP 434


>gi|84515110|ref|ZP_01002473.1| ATP synthase subunit B [Loktanella vestfoldensis SKA53]
 gi|84511269|gb|EAQ07723.1| ATP synthase subunit B [Loktanella vestfoldensis SKA53]
          Length = 474

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 192/418 (45%), Gaps = 20/418 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + ++      + + +V   +  + +    +   E + 
Sbjct: 6   GKITQVIGAVVDVQFTDHLPAILNALITDNNGKELVLEVAQHLGENTIRAIAMDSTEGLV 65

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V        +       GR++N +G PID    +G+ +    I +  PP   +   
Sbjct: 66  RGQEVIDQDNTITVPVGDATLGRIMNVVGAPIDEKGPIGETE-RRSIHADAPPFEAQSTA 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   +++             K  +V    +E P  R    L+ +T+AE F  +  
Sbjct: 185 TREGNDLYYEFIESGVINIDDLTKSKVALVYGQMNEPPGARMRVALSGLTMAESFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+
Sbjct: 245 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKSGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SRL D A    +
Sbjct: 303 VQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
             K+ + + +++ R++  +DI  I G     +      V +   I  FL Q P D++ 
Sbjct: 363 HYKVAADVQNMLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQ-PFDVAQ 418


>gi|212896610|gb|ACJ38508.1| membrane-bound ATP synthase subunit B [Neonotonia wightii]
          Length = 470

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 33  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 93  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 151

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 152 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLXMEMKESGVINEQNIA 211

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+ +AEYF      +VLL +D+I RF  +  E++  
Sbjct: 212 ESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 271

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 272 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 330 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 389

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 390 ILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|312285287|gb|ADQ64385.1| ATP synthase beta subunit [Triclisia subcordata]
          Length = 469

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LTRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|293391130|ref|ZP_06635464.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951664|gb|EFE01783.1| F0F1 ATP synthase subunit beta [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 457

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 186/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVETGLTLEVQQQLG--SGVVRCIALGASD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +     ++       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGEPIDEQGPIGEEE-RWSIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRIPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|160872202|ref|ZP_02062334.1| ATP synthase F1, beta subunit [Rickettsiella grylli]
 gi|159121001|gb|EDP46339.1| ATP synthase F1, beta subunit [Rickettsiella grylli]
          Length = 463

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 194/409 (47%), Gaps = 14/409 (3%)

Query: 20  VVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +   G I  I      V     +   + D +   G   D + +V + +   IV    +G 
Sbjct: 5   IKPIGSIVEIIGAVIDVEFPRGEIPKVFDALTVDG--HDLVLEVQQQLGDGIVRTIAMGT 62

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V +      +       GR+++ LGKPID    + + ++ + I  K P   
Sbjct: 63  SDGLKRGTKVMNTKAPISVPVGKQTLGRIMDVLGKPIDEAGPIHE-EIRLPIHRKPPTFS 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +   E+  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 122 EQAVNEQLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFA 181

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  +G ++
Sbjct: 182 GVGERTREGNDFYHEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTVAEYFRDEGRDI 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 242 LLFIDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAAEMGALQERI--TSTKTGSITSIQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +AE G YP +DPL S SR  D      +   
Sbjct: 300 VYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAIDPLDSNSRQLDPLIVGQEHYD 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   + RF+E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARAVQKTLQRFKELKDIIAILGMDELSEHD-KLTVMRARKIQRFLSQP 407


>gi|155029355|dbj|BAF75561.1| ATP synthase beta subunit [Ostodes paniculata]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|139389649|ref|YP_001123206.1| ATPase beta subunit [Arabis hirsuta]
 gi|190358254|sp|A4QK25|ATPB_ARAHI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286404|dbj|BAF50030.1| ATPase beta subunit [Arabis hirsuta]
          Length = 498

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|66773080|ref|NP_001019600.1| mitochondrial ATP synthase beta subunit-like [Danio rerio]
 gi|66267496|gb|AAH95620.1| Zgc:111961 [Danio rerio]
          Length = 517

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +   G++S  + +V   +  + V    +   E +
Sbjct: 49  SGRIVAVIGAVVDVQFDEGLPPILNALEVAGRDSRLVLEVAQHLGENTVRTIAMDGTEGL 108

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +     +  I ++ P   +   
Sbjct: 109 VRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPIS-TKQTAPIHAEAPEFTDMSV 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 168 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 227

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 228 RTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 287

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 288 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 345

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 346 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTE 405

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 406 HYDVARGVQKILQDYKSLQDIIAILGMDELSEGD-KLTVARARKIQRFLSQP---FQVAE 461

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 462 VFTGHLGKL 470


>gi|118573511|sp|Q85V57|ATPB_BOWVO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351867|emb|CAD48086.1| ATP synthase beta subunit [Bowiea sp. MP H600]
          Length = 495

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--HDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 79  MSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVD-TRITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708313|emb|CAB90088.1| ATP synthase beta subunit [Geum sp. 'Chase 2507 K']
          Length = 473

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 116/421 (27%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I SI      V   +  +       VV   K  D +GQ I +  ++        V   
Sbjct: 6   GRIGSIIGPVLDVAFPTGKMPNIYNALVV---KGRDTVGQPINVACEVQQLLGNNRVRAV 62

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    
Sbjct: 63  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSA 121

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 122 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 181

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 182 SVFGGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTM 241

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 242 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--T 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 300 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 360 LQPRIVGEDHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 418

Query: 420 S 420
            
Sbjct: 419 P 419


>gi|15705380|gb|AAL05618.1| AtpB [Sarcococca confusa]
          Length = 487

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|3850934|gb|AAC72159.1| ATP synthase beta subunit [Carnarvonia araliifolia]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKLPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850904|gb|AAC72144.1| ATP synthase beta subunit [Toronia toru]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62184048|gb|AAX73335.1| ATP synthase beta subunit [Banksia quercifolia]
          Length = 497

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|218931460|gb|ACL12359.1| ATP synthase beta subunit [Myosotidium hortensia]
          Length = 473

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|254292529|ref|YP_003058552.1| ATP synthase F1 subunit beta [Hirschia baltica ATCC 49814]
 gi|254041060|gb|ACT57855.1| ATP synthase F1, beta subunit [Hirschia baltica ATCC 49814]
          Length = 475

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 104/412 (25%), Positives = 186/412 (45%), Gaps = 19/412 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V        + + +V     +  + +V   +  + V    +   E ++
Sbjct: 7   GKISQVIGAVVDVEFDGTLPDILNALVTDNNGNKLVLEVAQHLGENTVRTIAMDATEGLT 66

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+PID    +   +    I +  P  +++   
Sbjct: 67  RGHPVTDTGEPIMVPVGPATLGRIMNVIGEPIDEAGEIATSE-RRAIHASAPDFVDQNPE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 SEVLATGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAYGGYSVFAGVGER 185

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +        G    ++ +V    +E P  R    LT +  AEYF  +  
Sbjct: 186 TREGNDLYWEMIESKVNEEGGGGDSRATLVYGQMNEPPGARARVALTGLAQAEYFRDEEG 245

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+
Sbjct: 246 KDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERI--TSTHKGSITS 303

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        +
Sbjct: 304 VQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILSADVVGEE 363

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +  ++ +++E +DI  I G     +      V +   +  FL Q 
Sbjct: 364 HYQVSRDVQEILQKYKELQDIIAILGMDELSEDD-KMTVARARKVERFLSQP 414


>gi|206577341|ref|YP_002241287.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae 342]
 gi|288937926|ref|YP_003441985.1| ATP synthase F1 subunit beta [Klebsiella variicola At-22]
 gi|290511666|ref|ZP_06551034.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55]
 gi|226740210|sp|B5XZM4|ATPB_KLEP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|206566399|gb|ACI08175.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae 342]
 gi|288892635|gb|ADC60953.1| ATP synthase F1, beta subunit [Klebsiella variicola At-22]
 gi|289775456|gb|EFD83456.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55]
          Length = 460

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 185/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  Q      + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYEALEVQNGKEVLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLEVKDLEHPIEVPVGKATLGRIMNVLGQPVDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|194267339|gb|ACF35656.1| ATP synthase beta subunit [Carnarvonia araliifolia]
          Length = 497

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKLPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|139389957|ref|YP_001123557.1| ATPase beta subunit [Draba nemorosa]
 gi|190358668|sp|A4QL26|ATPB_DRANE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286759|dbj|BAF50381.1| ATPase beta subunit [Draba nemorosa]
          Length = 498

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGSPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|61968239|gb|AAX57046.1| ATP synthase beta subunit [Flueggea suffruticosa]
          Length = 479

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|21633265|gb|AAM52107.1| ATP synthase beta subunit [Ipomoea batatas]
          Length = 487

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+    ++   +V ++  +  V    +   
Sbjct: 18  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRGNEQTNVTCEVQQLLGNNRVRAVAMSDT 77

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    + + + +  I    P  + 
Sbjct: 78  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPV-ETNTTSPIHRSAPAFIQ 136

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 137 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 196

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 197 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 256

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 257 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 314

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 315 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 374

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|14718169|gb|AAK72823.1| ATP synthase beta subunit [Pereskia aculeata]
          Length = 473

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGXVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|62085151|gb|AAX62981.1| ATP synthase beta subunit [Kiggelaria sp. Alford 51]
          Length = 485

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTHTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 426


>gi|57868962|gb|AAW57477.1| ATP synthase beta subunit [Shortia uniflora]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      VT  +  +       VV   ++ D +GQ I +  ++        V   
Sbjct: 13  GRIVQIIGPVLDVTFPTGKMPNIYNALVV---QSRDTVGQPINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRAA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 367 LQPWILGEEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|49476187|ref|YP_034228.1| F0F1 ATP synthase subunit beta [Bartonella henselae str. Houston-1]
 gi|81827679|sp|Q6G1W9|ATPB_BARHE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49238995|emb|CAF28295.1| ATP synthase beta chain [Bartonella henselae str. Houston-1]
          Length = 531

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 106/436 (24%), Positives = 186/436 (42%), Gaps = 26/436 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I  +      V        + + +      +  + +V   +  + V    +   +
Sbjct: 55  AAVGVIKQVIGAVVDVQFEGPLPNILNALETDNLGNRLVLEVAQHLGENTVRTIAMDTTD 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  VF  G +  +       GR++N +G+P+D    +     +  I  + P  + +
Sbjct: 115 GLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSK-TRSIHQEAPEYVEQ 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +         + + V
Sbjct: 174 STASEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLGD-------------NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           GER RE  +   + +                  K  +V    +E P  R    L+ +TIA
Sbjct: 234 GERTREGNDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIA 293

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  
Sbjct: 294 ESFRDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TST 351

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D
Sbjct: 352 RTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLD 411

Query: 363 KAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                +E   +   +  ++ R+   +DI  I G     +      V +   I  FL Q  
Sbjct: 412 PLIVGEEHYTVACQVQTILQRYRSLQDIIAILGMDELSEDD-KLLVGRARKIERFLSQP- 469

Query: 422 SDLSSEDVFQEITKKL 437
                 + F     KL
Sbjct: 470 --FHVAEAFTGSPGKL 483


>gi|195183504|dbj|BAG66965.1| ATP synthase beta subunit [Hybanthus elatus]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYIEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGDEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850976|gb|AAC72180.1| ATP synthase beta subunit [Alloxylon wickhamii]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNITESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|66276259|gb|AAY44144.1| ATP synthase beta subunit [Begonia oxyloba]
          Length = 488

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|62184030|gb|AAX73326.1| ATP synthase beta subunit [Banksia attenuata]
          Length = 497

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|327264485|ref|XP_003217044.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Anolis
           carolinensis]
          Length = 528

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 195/431 (45%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G I ++      V        + + +  QG+++  + +V   +  + V    +   E
Sbjct: 58  VATGRIVAVIGAVVDVQFEEALPPILNALEVQGRDTRLVLEVAQHLGENTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    +     +  I ++ P  +  
Sbjct: 118 GLVRGQRVLDLGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPAFVEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 415 QEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP---FQV 470

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 471 AEVFTGYAGKL 481


>gi|291521330|emb|CBK79623.1| ATP synthase F1 subcomplex beta subunit [Coprococcus catus GD/7]
          Length = 462

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 190/408 (46%), Gaps = 17/408 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ I      +         + D +    K+   L  V+     +  D V    +G  
Sbjct: 7   GKITQIIGAVLDIKFADGNLPEINDAIRITRKDGSTL--VVEVAQHLGDDTVRCISMGPT 64

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N LG+ ID  ++  + +  + I  K P   +
Sbjct: 65  DGLVRGMEAIATGGPITVPVGEKTLGRIFNVLGEAIDNKEA-PQAEEHLPIHRKPPAFED 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
               ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   
Sbjct: 124 LSDEQEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AE+F   G +VL
Sbjct: 184 VGERTREGNDLYTEMSESGVINKTTMVFGQMNEPPGSRMRVGLTGLTMAEHFRDTGKDVL 243

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 244 LFIDNIFRFTQAGSEVSALLGRVPSAVGYQPTLQTEMGALQERI--TSTKTGSITSVQAV 301

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D      +  ++
Sbjct: 302 YVPADDLTDPAPATTFTHLDATTVLSRSIVELGIYPAVDPLESTSRMLDPHIVGEEHYRV 361

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             S+  ++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 362 ARSVQEILQRYKELQDIIAILGMDELSEED-KLVVSRARKVQRFLSQP 408


>gi|155573949|dbj|BAF75574.1| ATP synthase beta subunit [Triadica sebifera]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|155029367|dbj|BAF75567.1| ATP synthase beta subunit [Adenopeltis serrata]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6687120|emb|CAB64831.1| ATP synthase beta subunit [Cajophora acuminata]
          Length = 498

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633351|gb|AAM52150.1| ATP synthase beta subunit [Hildebrandtia promontorii]
          Length = 487

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V   S  +  + + +V QG++++ +    +V ++  +  V    +   
Sbjct: 18  GRIVQIIGPVLDVAFPSGKMPNIYNALVVQGRDNEQMNVACEVQQLLGNNRVRAVAMSDT 77

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +       P  + 
Sbjct: 78  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TKTTSPFHRSAPAFIQ 136

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 137 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 196

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER  E  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 197 VGERTXEGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 256

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 257 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 314

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 315 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 374

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|239909143|ref|YP_002955885.1| flagellum-specific ATP synthase [Desulfovibrio magneticus RS-1]
 gi|239799010|dbj|BAH77999.1| flagellum-specific ATP synthase [Desulfovibrio magneticus RS-1]
          Length = 441

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 160/419 (38%), Positives = 238/419 (56%), Gaps = 8/419 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNLGQVIRINLDIVYICPVGIGEEI 81
           G +S +  +      +   V     ++ QG+   ++   +V+          P G    I
Sbjct: 23  GKVSKVVGLIAEGRGIRAPVGSVCHMLPQGEAPGTEVPAEVVGFRDGACLFMPYGDLRGI 82

Query: 82  SLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G L+ +     +      + GRVI+A G PID  D +     +  I +  P  M+R R
Sbjct: 83  APGTLIRNTSTPPLFPVGRRYLGRVIDAFGNPIDNGDPVVPRRFN-PIFAPAPSPMDRPR 141

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           +      G+R I+    L  GQR+G+ AGSG+GKSTL+ M AR+   D  +I LVGERGR
Sbjct: 142 ICDPMDVGVRAINGCLTLGKGQRVGIMAGSGVGKSTLMGMIARNTVADVNVIGLVGERGR 201

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           E+REFI +D   + + +SVVVVATSD+SP++R  A   A  +AE+F  +G++V+L++DS+
Sbjct: 202 ELREFIEKDLGPEGMARSVVVVATSDQSPLIRMRAAYAATAMAEFFRDEGNDVILMMDSV 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + RE+   +GE P  RGY  SVF++LP+LLER G +    G+IT + +VLVDGD+
Sbjct: 262 TRFAMAGREVGLAAGEPPTTRGYTPSVFAQLPKLLERAGRNGL--GSITGIYTVLVDGDD 319

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PIADSVRSILDGHIVL R LA++G +P +D L S+SRL       D       L  L
Sbjct: 320 FNEPIADSVRSILDGHIVLTRDLADQGHFPAIDVLRSISRLRSDVTPKDALAASRELIRL 379

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           +  +    D+  IG Y  G +  +D+A+  +  I  FL+Q  ++  S E+ FQ +   +
Sbjct: 380 LATYRRVEDMVNIGAYARGANPEIDRAIDMIGPINTFLRQDVAERQSLEECFQAVIALI 438


>gi|155029341|dbj|BAF75554.1| ATP synthase beta subunit [Endospermum moluccanum]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|155029357|dbj|BAF75562.1| ATP synthase beta subunit [Ricinocarpos pinifolius]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        +    
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRIRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLRRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 SFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|153853572|ref|ZP_01994952.1| hypothetical protein DORLON_00942 [Dorea longicatena DSM 13814]
 gi|149753727|gb|EDM63658.1| hypothetical protein DORLON_00942 [Dorea longicatena DSM 13814]
          Length = 465

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 188/418 (44%), Gaps = 17/418 (4%)

Query: 24  GYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G I  +      V   S+     + D +         + +V   +  +I     +   E 
Sbjct: 4   GRIVQVMGPVVDVEFNSREELPFIKDALEVDNGGKRCVMEVAQHVGNNIARCIMLASSEG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   ++       GR+ N LG+ ID  + +   +    I  K P    + 
Sbjct: 64  LQKGMEVTATGAGIKVPVGEKTLGRLFNVLGETIDNGEPIKDSE-EWVIHRKAPSFEEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+VID+ TP   G +IG+F G+G+GK+ L+     +   +    S+   VG
Sbjct: 123 PAVEVLETGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVG 182

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLL 254
           ER RE  +   +     +  K+ +V    +E P  R     T +T+AEYF   +  NVLL
Sbjct: 183 ERSREGNDLWTEMRESGVLDKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDVEHQNVLL 242

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V 
Sbjct: 243 FIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLANEMGALQERIA--STKNGSVTSVQAVY 300

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  S LD   VL+R + E+G YP VDPL S SR+ + A    +  ++ 
Sbjct: 301 VPADDLTDPAPATTFSHLDATTVLSRKIVEQGIYPAVDPLDSTSRILEPAVVGEEHYQVA 360

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
             +  ++ +++E +DI  I G     +      V +   I  FL Q     S  + F 
Sbjct: 361 RKVQEILQKYKELQDIIAILGMEELSEED-KMTVARARKIQKFLSQP---FSVAETFT 414


>gi|62085188|gb|AAX62998.1| ATP synthase beta subunit [Poliothyrsis sp. Alford 44]
          Length = 484

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGEQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62085145|gb|AAX62978.1| ATP synthase beta subunit [Hura crepitans]
          Length = 482

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|323715474|gb|ADY04805.1| ATP synthase beta subunit [Hydrangea peruviana]
          Length = 485

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 219 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|269798925|gb|ACZ43762.1| ATP synthase beta subunit [Corchoropsis psilocarpa]
          Length = 470

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 5   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNLGESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|115564931|emb|CAJ70618.1| ATP synthase beta subunit [Sinowilsonia henryi]
          Length = 467

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+SI      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIASIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|108563771|ref|YP_628087.1| flagellum-specific ATP synthase [Helicobacter pylori HPAG1]
 gi|107837544|gb|ABF85413.1| flagellum-specific ATP synthase [Helicobacter pylori HPAG1]
          Length = 434

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 232/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   ++ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKNDGTECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID   +L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQIGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|33318661|gb|AAQ05214.1| ATP synthase beta subunit [Cycas revoluta]
          Length = 486

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I   V   V        + + ++ +GK  D  GQ I +  ++        V    
Sbjct: 13  GHIVQIIGPVLDVVFSPGNMPNILNSLIIKGK--DTAGQEINVTCEVQQLLGNNKVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLKRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-ARTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +     +         K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYVEMKESGVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|24940166|emb|CAD43367.1| ATP synthase beta subunit [Cerinthe major]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRVVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQSINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|4995792|emb|CAB44261.1| H(+)-transporting ATP synthase [Ruizia cordata]
          Length = 471

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 27  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 86

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 87  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 145

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 146 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 205

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+ +AEYF      +VLL +D+I RF  +  E++  
Sbjct: 206 ESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 265

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 266 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 323

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 324 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 383

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 384 ILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|317010211|gb|ADU80791.1| flagellum-specific ATP synthase [Helicobacter pylori India7]
          Length = 434

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 232/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   ++ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID   +L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|183206538|gb|ACC54467.1| ATP synthase beta subunit [Pseudonemacladus oppositifolius]
          Length = 498

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTAPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVIKEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|160895869|ref|YP_001561451.1| F0F1 ATP synthase subunit beta [Delftia acidovorans SPH-1]
 gi|226740187|sp|A9BPU7|ATPB_DELAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160361453|gb|ABX33066.1| ATP synthase F1, beta subunit [Delftia acidovorans SPH-1]
          Length = 469

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 176/374 (47%), Gaps = 18/374 (4%)

Query: 61  QVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
           +V ++  D +V    +G  + +  G +V + G    +       GR+++ LG PID    
Sbjct: 42  EVQQLLGDGVVRTIALGSSDGLRRGLMVSNTGNPITVPVGKATLGRIMDVLGNPIDERGP 101

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +  L+  I  K P        ++  +TGI+VID+ +P   G ++G+F G+G+GK+  +
Sbjct: 102 VDQA-LTAPIHRKAPAYDELSPSQELLETGIKVIDLISPFAKGGKVGLFGGAGVGKTVNM 160

Query: 179 SMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDES 227
                +         + + VGER RE  +F  +               K  +V    +E 
Sbjct: 161 MELINNIAKGHGGLSVFAGVGERTREGNDFYHEMSDAGVVNQESLNDSKVAMVYGQMNEP 220

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
           P  R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++ 
Sbjct: 221 PGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLA 280

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
            E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G 
Sbjct: 281 EEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGI 338

Query: 348 YPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           YP VDPL S SR  D      +  K+   +   + R++E RDI  I G    +       
Sbjct: 339 YPAVDPLDSTSRQLDPQVVGEEHYKVAREVQGTLQRYKELRDIIAILGMDE-LAPEDKLT 397

Query: 407 VHQVPIIYDFLKQS 420
           V +   I  FL Q 
Sbjct: 398 VARARKIQRFLSQP 411


>gi|7708319|emb|CAB90084.1| ATP synthase beta subunit [Goupia glabra]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|183206574|gb|ACC54485.1| ATP synthase beta subunit [Jasione crispa]
          Length = 480

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKESGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|90409883|ref|ZP_01217900.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
 gi|90329236|gb|EAS45493.1| ATP synthase subunit B [Photobacterium profundum 3TCK]
          Length = 461

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 186/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  +      V      V        +  G NS  + +V + I   +V    +G 
Sbjct: 1   MSTGKIVKVIGAVVDVEFDQDSVPRVYDALNIIDGDNSSLVLEVQQQIGSGVVRCIAMGS 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G    + G    +       GR++N LG PID    +G+   S  I  + P   
Sbjct: 61  SDGMRRGLTAVNTGEPITVPVGEETLGRIMNVLGHPIDECGEIGE-KTSYPIHREPPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 EQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFT 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +     +  K  +V    +E P  R    LT +TIAE F  +G +V
Sbjct: 180 GVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +   KG+IT++ +
Sbjct: 240 LLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTHKGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +  +
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGTEHYE 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 358 VARGVQTVLQRYKELKDIIAILGMDELSEDD-KLTVARARKVERFLTQP 405


>gi|61968315|gb|AAX57084.1| ATP synthase beta subunit [Savia dictyocarpa]
          Length = 479

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYREMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|6689309|emb|CAB65431.1| ATP synthase beta subunit [Billardiera heterophylla]
          Length = 498

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 50  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGTTLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +  +     F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPID-TRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIE 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|24940204|emb|CAD43392.1| ATP synthase beta subunit [Hydrolea sp. Chase 3245]
          Length = 485

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D+LGQ I +  ++        V    
Sbjct: 13  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSLGQPINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAAISVPVGGSTLGRIFNVLGEPVDDLGPVDASTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESKVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNNQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGDEHYQTAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850968|gb|AAC72176.1| ATP synthase beta subunit [Gevuina bleasdalei]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|325269440|ref|ZP_08136057.1| ATP synthase F1 sector alpha subunit [Prevotella multiformis DSM
           16608]
 gi|324988361|gb|EGC20327.1| ATP synthase F1 sector alpha subunit [Prevotella multiformis DSM
           16608]
          Length = 527

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 90/433 (20%), Positives = 168/433 (38%), Gaps = 37/433 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +++     V  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTVSDGVARVYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCILLGPTSGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G+ V    R   I  +  + GRV+N LG+ IDG   +   D   M +  K P  + RQ
Sbjct: 85  KEGESVKRTHRIASIRVNDNFLGRVVNPLGEAIDGKGDIDLADSFEMPLDRKAPGVIFRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKSFYEQGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   +++         +++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVATLVQNLKDHGALPYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGYS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINDQQEIAERMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPECMKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETDLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQVKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDKVTAMTLDRGR 441

Query: 412 IIYDFLKQSPSDL 424
                L Q   + 
Sbjct: 442 KNNQLLIQPQYNP 454


>gi|317406228|gb|EFV86474.1| flagellar biosynthesis ATPase FliI [Achromobacter xylosoxidans C54]
          Length = 477

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 152/457 (33%), Positives = 235/457 (51%), Gaps = 31/457 (6%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S +  +  G I+  T +    T L   V     + + +G +     +V+  +   +
Sbjct: 16  IRAASTDPWLVSGKITRATGLVLHATGLRLPVGAAARIEIARGHDHWADAEVVGFDGHTL 75

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 76  YLMPQADISGLPPGARVVPGEPPVQRQIPLPRKAELNGNAKPQLGRHLPVGNALLGRVLD 135

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG   L   +L+  + ++    ++R  ++    TG+R I+    +  GQR+G+F
Sbjct: 136 GAGRPLDGLGPLTGAELA-PLSAQPINPLSRAPIDTVLDTGVRAINGLLTVGRGQRMGLF 194

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D 
Sbjct: 195 AGSGVGKSVLLGMMARYTKADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADV 254

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S +LR      A  +AE+F  +G +VLLI+DS+TR+A + R IA   GE P  +GYP SV
Sbjct: 255 SALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQRGIALAIGEPPATKGYPPSV 314

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G        + G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R L
Sbjct: 315 FAKLPTLVERAGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHL 374

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      +  +  +V      + R++  RD+  +G Y  G D  
Sbjct: 375 AEAGHYPAIDIEASISRAMTSLITPQQFSVVRRFKQTLSRYQRNRDLIAVGAYAAGNDPQ 434

Query: 403 LDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438
           LD A+ + P +  FL+Q   + +  ED  +++    +
Sbjct: 435 LDDAIARYPRLEAFLQQDIGENVGYEDAVEQLRASFE 471


>gi|305671657|gb|ADM63138.1| ATP synthase beta subunit [Mackinlaya confusa]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GSITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTSTIS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|155029359|dbj|BAF75563.1| ATP synthase beta subunit [Suregada aequoreum]
 gi|155029361|dbj|BAF75564.1| ATP synthase beta subunit [Suregada glomerulata]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61968203|gb|AAX57028.1| ATP synthase beta subunit [Andrachne aspera]
          Length = 479

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I         +  + V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVICEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|34539201|gb|AAQ74484.1| F1-ATPase alpha subunit [Asparagus officinalis]
          Length = 407

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 89/404 (22%), Positives = 163/404 (40%), Gaps = 23/404 (5%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G 
Sbjct: 1   IARVYGLNE-IQAGEMVEFA---SGVKGLALNLENENVGIVIYGSDTTIKKGDLVKRTGS 56

Query: 93  FRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
               P      GRV++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ 
Sbjct: 57  IVDVPAGKAMLGRVVDTLGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGR 200
           +D   P+  GQR  +      GK+ +      +                 +   +G++  
Sbjct: 116 VDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERSTSESETLYCVYVAIGQKRS 175

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            V + ++     N  + S++V AT+ ++  ++ +AP +  T+ EYF   G + L+I D +
Sbjct: 176 TVAQLVQILPEANALEYSIIVAATASDAAPMQFVAPYSGCTMGEYFRDNGMHALIIYDDL 235

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R++A      P    +P  +F    RLLER      +   G+ TA+  +    
Sbjct: 236 SKQAVAYRQMALLLRRPPGREAFPGDIFYLHSRLLERAAKRSDQTGAGSSTALPVIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V  I  G I     L   G  P ++   SVSR+   A     K++  S  
Sbjct: 296 GDVSAYIPTNVIPITGGQICSETELFYRGIRPAINIGLSVSRVGSAAQLKAMKQVCGSSK 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 LELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 396


>gi|33312212|gb|AAQ04022.1| ATP synthase beta subunit [Stimpsonia chamaedryoides]
          Length = 487

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTAPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF       VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQXVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|30351917|emb|CAD48469.1| ATP synthase beta subunit [Polyxena ensifolia]
          Length = 456

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|183206540|gb|ACC54468.1| ATP synthase beta subunit [Azorina vidalii]
          Length = 476

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 119/420 (28%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 9   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 67  MSATEGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYKEMXDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +D   K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPXIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|21633405|gb|AAM52177.1| ATP synthase beta subunit [Dipteropeltis poranoides]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TKTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVIDEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|18075915|emb|CAD11914.1| ATP synthase beta subunit [Columellia oblonga]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V    + +  + + +V +G+  D LGQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPRKMPNIYNALVVKGQ--DTLGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMYVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPWIVGEEHYDIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850930|gb|AAC72157.1| ATP synthase beta subunit [Leucadendron salignum]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|13508337|ref|NP_110287.1| F0F1 ATP synthase subunit beta [Mycoplasma pneumoniae M129]
 gi|2493024|sp|Q50331|ATPB_MYCPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|1209766|gb|AAC43659.1| ATP synthase beta chain [Mycoplasma pneumoniae]
 gi|1673912|gb|AAB95892.1| ATP synthase beta chain [Mycoplasma pneumoniae M129]
 gi|301633266|gb|ADK86820.1| ATP synthase F1, beta subunit [Mycoplasma pneumoniae FH]
          Length = 475

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 121/411 (29%), Positives = 202/411 (49%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQVIRI-NLDIVYICPVGI 77
           +  G +  +      V  T  SQ   + D +  +    +   +  ++   DIV    +G 
Sbjct: 6   ITYGKVHQVIGPVVDVIFTESSQLPRIYDCLSVKLAGEELFLEAAQLIGDDIVRCIALGP 65

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E ++  + V ++     +       GR+ N LGKPIDG + L K    + I  K P   
Sbjct: 66  TEGLARNEKVTNYNHPIEVPVGKNVLGRMFNVLGKPIDGKEELPKKPQ-LPIHRKPPSFD 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    + F+TGI+VID+ TP   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 125 DQSNTLEIFETGIKVIDLLTPYARGGKIGLFGGAGVGKTVLVQELIHNIAKEHSGLSVFA 184

Query: 194 LVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDN 251
            VGER RE  +   +   G  + K+ +V    +E P  R    LTA+T+AEYF      +
Sbjct: 185 GVGERTREGNDLYYEMIQGGVIDKTALVFGQMNEPPGARMRVALTALTMAEYFRDHDNQD 244

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  ++   G+IT+V 
Sbjct: 245 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIASTKT--GSITSVQ 302

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           ++ V  D+  DP   +  + LD   VL+R++A  G +P ++PL S SRL D      +  
Sbjct: 303 AIYVPADDLTDPAPATTFTHLDAKTVLDRNIAALGIFPAINPLESTSRLLDPNIVGINHY 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQS 420
           K+   + +++ RF E +DI  I G     D   DK +  +   I +FL Q 
Sbjct: 363 KVALGVQNILQRFAELQDIIAILGIDELADE--DKIIVERARRIRNFLSQP 411


>gi|294786384|ref|ZP_06751638.1| ATP synthase F1, alpha subunit [Parascardovia denticolens F0305]
 gi|315225945|ref|ZP_07867733.1| ATP synthase F1 sector alpha subunit [Parascardovia denticolens DSM
           10105]
 gi|294485217|gb|EFG32851.1| ATP synthase F1, alpha subunit [Parascardovia denticolens F0305]
 gi|315120077|gb|EFT83209.1| ATP synthase F1 sector alpha subunit [Parascardovia denticolens DSM
           10105]
          Length = 556

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 95/439 (21%), Positives = 176/439 (40%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y  +     + GY+ +       V  L       + +  +      LG   
Sbjct: 13  QALNDFVESYKPSSAPTQEVGYVKTAGDGIAQVEGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + + 
Sbjct: 69  NLDAREIGVVILGDFIGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGHPIDGLGEI-QS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++  +TGI+ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDQPMETGIKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   VG++G  +               + +V + + +S   +
Sbjct: 188 INQKKNWETGDPSKQVRCIYVAVGQKGSTIASVRASLEDAGAMEYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCARLSDDMGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLTR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GARLMELLKQPQFSPYSSE 443


>gi|22651734|gb|AAM26939.1| ATP synthase beta subunit [Drosophyllum lusitanicum]
          Length = 476

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRTVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGVPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|7708311|emb|CAB89906.1| ATP synthase beta subunit [Hydnocarpus heterophyllus]
 gi|14718078|gb|AAK72780.1| ATP synthase beta subunit [Hydnocarpus heterophyllus]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      V     +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 13  SGRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAV 70

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 71  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSA 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 130 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 189

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 190 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 249

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 250 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 308 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 367

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 368 LQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 426

Query: 420 S 420
            
Sbjct: 427 P 427


>gi|3850908|gb|AAC72146.1| ATP synthase beta subunit [Symphionema montanum]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|260437517|ref|ZP_05791333.1| ATP synthase F1, beta subunit [Butyrivibrio crossotus DSM 2876]
 gi|292810150|gb|EFF69355.1| ATP synthase F1, beta subunit [Butyrivibrio crossotus DSM 2876]
          Length = 463

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/409 (27%), Positives = 190/409 (46%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVV-HQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ I      +   +  +   +  +    KN + L  V+     +  D V    +G  
Sbjct: 7   GKITQIIGAVLDIKFANGGLPEINTAINVYRKNGEKL--VVEVAQHLGDDTVRCIAMGTT 64

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N LG+ ID   +  + +  + I  K P    
Sbjct: 65  DGLVRGMEAESTGAPISVPVGEKTLGRIFNVLGEAIDNKPA-PEVEQYLPIHRKAPSFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   
Sbjct: 124 QSTSTEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G  +V
Sbjct: 184 VGERTREGNDLYHEMQESGVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D      +  K
Sbjct: 302 VYVPADDLTDPAPATTFAHLDATTVLDRSIVELGIYPAVDPLGSSSRILDPRIVGEEHYK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  I G     +      V +   +  FL Q 
Sbjct: 362 VARGVQEILQKYKELQDIIAILGMDELSEDD-KLVVARARKVQRFLSQP 409


>gi|213495654|gb|ACJ49079.1| AtpB [Acacia pulchella]
          Length = 428

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 6   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 66  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 125 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 184

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 185 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 245 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 302

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 303 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 362

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 363 ILGLDELSEED-RLTVARARKIERFLSQP 390


>gi|155029293|dbj|BAF75527.1| ATP synthase beta subunit [Adelia ricinella]
 gi|155029303|dbj|BAF75532.1| ATP synthase beta subunit [Lasiocroton macrophyllus]
 gi|155029305|dbj|BAF75533.1| ATP synthase beta subunit [Leucocroton microphyllus]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917378|dbj|BAF40488.1| ATP synthase beta subunit [Byrsonima crassifolia]
          Length = 485

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|62085097|gb|AAX62955.1| ATP synthase beta subunit [Atuna racemosa]
          Length = 486

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|58039763|ref|YP_191727.1| F0F1 ATP synthase subunit beta [Gluconobacter oxydans 621H]
 gi|81819085|sp|Q5FRC5|ATPB1_GLUOX RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|58002177|gb|AAW61071.1| ATP synthase beta chain [Gluconobacter oxydans 621H]
          Length = 487

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 186/432 (43%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +  Q  +   + +V   I    V    +   + + 
Sbjct: 17  GRVTQVRGPVVDVQFEGDLPFILNALHVQNGDHTLVLEVAQEIGERQVRCIAMDTTDGLV 76

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   +       GR++N +G+PID    +   +L   I    P    +   
Sbjct: 77  RGTEVRDTGKQIMVPVGPATLGRILNVVGEPIDERGPIS-SELRFPIHRPAPSFEEQAAA 135

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ ++     +         + + VGER
Sbjct: 136 SEILVTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGER 195

Query: 199 GREVREFIEDYLGDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            RE  +   +     +            K  +V    +E P  R    LT +++AEYF  
Sbjct: 196 TREGNDLYFEMQDAGVIKIAEDGSTEGSKVALVYGQMNEPPGARSRVALTGLSLAEYFRD 255

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+
Sbjct: 256 EEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGS 313

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V +V V  D+  DP   +  + LD   VLNRS+AE G YP VDPL S SR  D    
Sbjct: 314 ITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIV 373

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +  ++   +   +  ++  +DI  I G     +    K V +   I  FL Q      
Sbjct: 374 GEEHYQVARQVQQTLQTYKGLQDIIAILGMDELSEDD-KKIVGRARRIQRFLSQP---FH 429

Query: 426 SEDVFQEITKKL 437
             +VF     KL
Sbjct: 430 VAEVFTGAPGKL 441


>gi|81176257|ref|YP_398336.1| ATP synthase CF1 beta subunit [Lactuca sativa]
 gi|118573691|sp|Q332X1|ATPB_LACSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|78675175|dbj|BAE47601.1| ATP synthase CF1 beta chain [Lactuca sativa]
 gi|88656990|gb|ABD47240.1| ATP synthase CF1 beta subunit [Lactuca sativa]
          Length = 498

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-TTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYDTAQEVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|294673894|ref|YP_003574510.1| ATP synthase F1 subunit alpha [Prevotella ruminicola 23]
 gi|294472465|gb|ADE81854.1| ATP synthase F1, alpha subunit [Prevotella ruminicola 23]
          Length = 528

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 91/430 (21%), Positives = 163/430 (37%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +++     +  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTVSDGVARIYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCVLLGSTSGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G +V    R   I  +    GRVIN LG+ IDG   +   +   M +  K P  + RQ
Sbjct: 85  KEGMVVKRTKRIASIRVNDNMLGRVINPLGQAIDGKGDIDLTEAFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ ID   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAIDSMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKSFYEAGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   +           ++VV AT+ +   ++  AP     I EYF  +G  
Sbjct: 205 VAIGQKASTVAALVSTLQEHGAMPYTIVVAATAADPAAMQYYAPFAGAAIGEYFRDRGLP 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER     ++        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAAKMNEQQEVAEQMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPECMKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L     ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKFSSDMDAVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|194267356|gb|ACF35664.1| ATP synthase beta subunit [Gevuina avellana]
          Length = 492

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|121720620|ref|YP_001001541.1| ATP synthase CF1 beta subunit [Nuphar advena]
 gi|69214418|gb|AAZ03789.1| ATP synthase beta chain [Nuphar advena]
 gi|84682211|gb|ABC60465.1| ATP synthase CF1 beta subunit [Nuphar advena]
          Length = 495

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D  GQ I +  ++        V   
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTAGQEINVTCEVQQLLGNNRVRAV 74

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 75  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 134 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 193

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 194 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 253

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 254 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 311

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 312 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 371

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 372 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 430

Query: 420 S 420
            
Sbjct: 431 P 431


>gi|63091833|emb|CAH58767.1| ATP synthase alpha chain [Enterococcus italicus DSM 15952]
 gi|63091983|emb|CAH58849.1| ATP synthase alpha chain [Enterococcus italicus]
          Length = 367

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 155/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGEI-KTDKTRPVEAAAPGVMQRKSVHEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDAIINQKGQDMICIYVAIGQKDSTVRTQVETLRK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              L  ++VV A + +   +  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGALDYTIVVSAGASQPAPMLYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  F E   
Sbjct: 296 ISITDGQIFLESDLFYSGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASFRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|6467949|gb|AAF13248.1|AF197615_1 ATPase beta subunit [Persoonia katerae]
          Length = 487

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|7688341|emb|CAB89740.1| ATP synthase beta subunit [Turnera ulmifolia]
          Length = 485

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  + +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRNTIGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMQVIDTGAALSVPVGEATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDDLGPVDTC-TRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         + + VGER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKDSGVINADNIT 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQSVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRIPSAVGYQPTLSTEMGSLQERI--TSTQEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +   +    +       +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQRQIVGDEHYDTAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLPVARARKIERFLSQP 426


>gi|62085101|gb|AAX62957.1| ATP synthase beta subunit [Bischofia javanica]
          Length = 482

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|57868922|gb|AAW57457.1| ATP synthase beta subunit [Cornus sericea]
          Length = 486

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATEGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|308026072|emb|CBK33636.1| ATP synthetase beta subunit [Petenaea cordata]
          Length = 476

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVVFTPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|15425588|emb|CAC60262.1| ATP synthase beta subunit [Pentaphragma ellipticum]
          Length = 489

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21684925|emb|CAD11589.1| ATP synthase beta subunit [Leersia oryzoides]
          Length = 497

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 178/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVV----HQGKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT     +       VV      GK  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKXGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3850962|gb|AAC72173.1| ATP synthase beta subunit [Panopsis ferruginea]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|66276271|gb|AAY44150.1| ATP synthase beta subunit [Datisca glomerata]
          Length = 488

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNFGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFQDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|28476434|gb|AAO44523.1| ATP synthase alpha chain [Tropheryma whipplei str. Twist]
          Length = 554

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 90/426 (21%), Positives = 167/426 (39%), Gaps = 21/426 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +         +  L   +   + V          G  + ++ D+  +  +G  + I
Sbjct: 46  EVGRVVDAADGVAHIEGL-PALMASELVEFSNG---TFGVTLNLDEDLAGVVVLGEFDGI 101

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   GR   I     + GRV++ LG+P+DG   +   +   E+  +    M R+ 
Sbjct: 102 VEGMDVRSTGRVLSIPVGDAFLGRVVDPLGRPVDGLGEV-PHETYRELELQAAGVMQRRS 160

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--------KVII 192
           V +  +TGI+ ID   P+  GQR  +      GK+T+      +   +          I 
Sbjct: 161 VHEPIQTGIKAIDTMIPIGRGQRQLIIGDRQTGKTTIAIDTIINQKDNWSDPEKRVFCIY 220

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++G  +               + +V   + +    + +AP +   I +++  +G +
Sbjct: 221 VAIGQKGSTIAGVKRVLEEAGCMEYTTIVATPASDPAGFKYIAPYSGSAIGQHWMYQGRH 280

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
           VL++ D +++ A + R I+      P    YP  VF    RLLER      E   G++T 
Sbjct: 281 VLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDEMGGGSMTG 340

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A     
Sbjct: 341 LPIIETKANDISAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGDAQIKSI 400

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL-KQSPSDLSSED 428
           KK+   L   + ++           +   +D +  + + +   + + L +Q  S    ED
Sbjct: 401 KKVSGMLKLELAQYRALE---AFSMFASDLDAVSRRQLDRGARLSELLRQQQQSPYPVED 457

Query: 429 VFQEIT 434
               I 
Sbjct: 458 QVVSIW 463


>gi|49474710|ref|YP_032752.1| F0F1 ATP synthase subunit beta [Bartonella quintana str. Toulouse]
 gi|81827581|sp|Q6FYM3|ATPB_BARQU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49240214|emb|CAF26682.1| ATP synthase beta chain [Bartonella quintana str. Toulouse]
          Length = 536

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 106/433 (24%), Positives = 189/433 (43%), Gaps = 26/433 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I  +      V        + + +  +   +  + +V   +  + V    +   + ++
Sbjct: 63  GEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLT 122

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  VF    +  +       GR++N +G+P+D    +     +  I  K P  +++   
Sbjct: 123 RGQKVFDTETQICVPVGEATLGRIMNVIGEPVDNVGPIATTK-TRSIHQKAPEYVDQSTA 181

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 182 SEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 241

Query: 199 GREVREFIEDYLGD-------------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +                  K  +V    +E P  R    L+ +TIAE F
Sbjct: 242 TREGNDLYYEMIESRVNVNPKDNNGSTKGSKCALVYGQMNEPPGARARVALSGLTIAESF 301

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G
Sbjct: 302 RDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTG 359

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D   
Sbjct: 360 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLV 419

Query: 366 SADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             +E   +   +  ++ R+   +DI  I G     +      V +   I  FL Q     
Sbjct: 420 VGEEHYTVACQVQTILQRYRSLQDIIAILGMDELSEED-KLLVGRARKIERFLSQP---F 475

Query: 425 SSEDVFQEITKKL 437
              + F     KL
Sbjct: 476 HVAETFTGSPGKL 488


>gi|305671677|gb|ADM63148.1| ATP synthase beta subunit [Patrinia triloba]
          Length = 442

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 1   KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVSDTGAPLSVPVGGATLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 61  IFNVLGEPVDNLGPVD-TRTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 120 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQKIA 179

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 180 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVSAL 239

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 240 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 297

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       D   +    +   + R++E +DI  
Sbjct: 298 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGDKHYETAQRVKQTLQRYKELQDIIA 357

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 358 ILGLDELSEED-RLTVARARKIERFLSQP 385


>gi|3850958|gb|AAC72171.1| ATP synthase beta subunit [Macadamia jansenii]
 gi|3850960|gb|AAC72172.1| ATP synthase beta subunit [Brabejum stellatifolium]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850964|gb|AAC72174.1| ATP synthase beta subunit [Cardwellia sublimis]
          Length = 490

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62184080|gb|AAX73351.1| ATP synthase beta subunit [Macadamia integrifolia]
 gi|194267360|gb|ACF35666.1| ATP synthase beta subunit [Heliciopsis lanceolata]
 gi|194267362|gb|ACF35667.1| ATP synthase beta subunit [Hicksbeachia pinnatifolia]
          Length = 497

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62184014|gb|AAX73318.1| ATP synthase beta subunit [Banksia serrata]
 gi|62184016|gb|AAX73319.1| ATP synthase beta subunit [Banksia aemula]
          Length = 497

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEQHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|254515885|ref|ZP_05127945.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR5-3]
 gi|219675607|gb|EED31973.1| ATP synthase F1, alpha subunit [gamma proteobacterium NOR5-3]
          Length = 514

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 177/447 (39%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ L       L         G I S+T     +  L+  V  G+ +   G   
Sbjct: 3   QLNPSEISDLIRQRIDQLDVSSEARNVGTIVSVTDGIIRIHGLTD-VMYGEMIEFDGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  ++++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLERDSVGAVVLGDYKKLAEGQSCRCTGRILEVPVGPELQGRVVDALGTPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++  +    P  + RQ V++  + G++ ID   P+  GQR  +     IGK+
Sbjct: 119 KGPVNAA-MTDALEKVAPGVIERQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      K +   VG++   V   +           ++VV A + +   ++ 
Sbjct: 178 AIAIDAIINQKGTGIKCVYVAVGQKASSVASVVRKLEEHGAMDHTIVVAANASDPAAMQY 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEKFTDGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 TDMFNSGVRPAMNAGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DDATKAQLDHGERVTELMKQKQYSPQS 441


>gi|113910874|gb|ABI48169.1| ATPase beta subunit [Leptobryum pyriforme]
 gi|113910876|gb|ABI48170.1| ATPase beta subunit [Bartramia pomiformis]
          Length = 472

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|7708278|emb|CAB90064.1| ATP synthase beta subunit [Dischidia lanceolata]
          Length = 457

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      VT     +       VV   K  D LG+ I +  ++        V   
Sbjct: 1   GRIXQIIGPVLDVTFPPGKMPYIYNALVV---KGRDTLGEPINVTCEVQQLLGNNRVRTV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +     +  G  V   G    +   +   GR+ N LG+PID    +   D +  I    
Sbjct: 58  AMSATNGLMRGMEVVDTGSPLSVPVGSLTLGRIFNVLGQPIDNLGPV-ATDTTSPIHKSP 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--- 189
           P  +  +     F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +        
Sbjct: 117 PAFIQLETKLSIFETGIKVVDLLAPYRRGGKTGLFGGAGVGKTVLIMELINNIAKAHQGV 176

Query: 190 VIISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFAGVGERTREGNDLYKEMKESGVINEQNLSESKVALVYGQMNEPPGARMXVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPKIVGDEHYETAQQVKQTLQRYKEVQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|14717931|gb|AAK72708.1| ATP synthase beta subunit [Allium altaicum]
          Length = 481

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRITQIIGPVLDVVFPRGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|62085154|gb|AAX62982.1| ATP synthase beta subunit [Lasiocroton bahamensis]
          Length = 482

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|28378938|ref|NP_785830.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum WCFS1]
 gi|254557143|ref|YP_003063560.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum JDM1]
 gi|300769661|ref|ZP_07079544.1| ATP synthase F1 sector beta subunit [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181146|ref|YP_003925274.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|81840957|sp|Q88UU3|ATPB_LACPL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28271775|emb|CAD64681.1| H(+)-transporting two-sector ATPase, beta subunit [Lactobacillus
           plantarum WCFS1]
 gi|254046070|gb|ACT62863.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum JDM1]
 gi|300492704|gb|EFK27889.1| ATP synthase F1 sector beta subunit [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046637|gb|ADN99180.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 467

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 116/411 (28%), Positives = 188/411 (45%), Gaps = 14/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCL--SQYVCLGDFVVHQGKNSDNLG-QV-IRINLDIVYICPVG 76
           +  G +  +      V      +   + + ++ Q  N D L  +V + +   +V    + 
Sbjct: 1   MSTGKVVQVIGPVVDVEFSLNDKLPDINNALIIQKDNDDTLTVEVSLELGDGVVRTVAMD 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GRV N LG+ IDG    G       I    P  
Sbjct: 61  GTDGLRRGMTVEDTGSSITVPVGKETLGRVFNVLGETIDGGPEFGPDAERNPIHRDAPKY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   IS+ 
Sbjct: 121 DELTTSTEVLETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + K + +V    +E P  R    LT +TIAEYF      
Sbjct: 181 TGVGERTREGNDLYFEMKASGVLKNTAMVYGQMNEPPGARMRVALTGLTIAEYFRDVQGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D++ DP   +  + LD    L RSL E+G YP VDPLAS S   D      + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERSLTEQGIYPAVDPLASSSIALDPSIVGEEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 YQVATEVQRVLQRYRELQDIISILGMDELSDEE-KTTVARARRIQFFLSQN 408


>gi|323715488|gb|ADY04812.1| ATP synthase beta subunit [Kirengeshoma palmata]
          Length = 487

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 19  GRITQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTTGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRCAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLPPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G++P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGKMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|320454994|dbj|BAJ65643.1| ATP synthase beta subunit [Metzgeria furcata]
          Length = 492

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/428 (25%), Positives = 185/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S ++    G I+ I      +     +   + + +V +G+NS   GQ I +  ++     
Sbjct: 11  SISVTTNVGNITQIIGPVLDIAFSPGKMPSIYNCLVVRGQNSA--GQEINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +     V   G    +       GR+ N LG+P+D    +     +
Sbjct: 69  NNKVRAVAMSATDGLMREMEVVDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVNAS-TT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|225572597|gb|ACN93884.1| AtpD [Gallibacterium anatis]
          Length = 452

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/410 (27%), Positives = 185/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V++  N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYEALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+PID    +G+      I    P  
Sbjct: 56  SSDGLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +T I+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQANSTELLETDIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 293 AVYVPADDLTDPPPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|224826630|ref|ZP_03699731.1| flagellar protein export ATPase FliI [Lutiella nitroferrum 2002]
 gi|224601231|gb|EEG07413.1| flagellar protein export ATPase FliI [Lutiella nitroferrum 2002]
          Length = 464

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 150/445 (33%), Positives = 228/445 (51%), Gaps = 28/445 (6%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPV 75
             L    G +  +T +      L   V  G    V          +V+    D V++ P+
Sbjct: 23  TPLWSTRGKLVRVTGMVMEAVGLKLPV--GSACSVALPDGGRVEAEVVGFAGDKVFLMPL 80

Query: 76  GIGEEISLGDLVFHW---------------------GRFRISPSACWCGRVINALGKPID 114
              + +  G  V                        GR ++       GRV+++LG+P+D
Sbjct: 81  TNVQGLLPGSEVRPLAMQHAPAFGQATVPLSLNGVAGR-QVPVGFNLLGRVLDSLGRPLD 139

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               L   +    + S+    + R  V      G+R I+    +  GQR+G+FAGSG+GK
Sbjct: 140 EKGPLQP-EAYFPLYSQPLNPLERSPVRDVLDVGVRAINGLLTVGRGQRLGLFAGSGVGK 198

Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKM 233
           S LL M AR    D V++ L+GERGREV++FIE+ LG+    +SV+V A +D  P++R  
Sbjct: 199 SVLLGMMARFTKADIVVVGLIGERGREVKDFIENILGEEGRARSVIVAAPADTPPLMRLH 258

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
               A  +AEY+  +G +VLL++DS+TR+A + REIA   GE PV +GYP SVF+ LP+L
Sbjct: 259 GAAYATALAEYYREQGLDVLLLMDSVTRYAMAQREIALAIGEPPVTKGYPPSVFARLPQL 318

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           +ER G + +  G ITA  +VL +GD+  DPIAD+ R+ILDGH VL+R LAE G YP +D 
Sbjct: 319 IERAGNAARGGGAITAFYTVLSEGDDQQDPIADAARAILDGHFVLSRELAEAGHYPAIDI 378

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             S+SR+     +  +  L      L  R++  RD+  +G Y  G D +LD+A+ +   +
Sbjct: 379 EQSISRVMVDVVAPRQMDLARRFKQLYSRYQRNRDLISVGAYVAGSDPMLDEAIRRQLPM 438

Query: 414 YDFLKQSPSDLSSEDV-FQEITKKL 437
             FL Q   +    D   +++   L
Sbjct: 439 VGFLTQPMHESHGYDSCLEQLATTL 463


>gi|194267383|gb|ACF35677.1| ATP synthase beta subunit [Panopsis cinnamomea]
          Length = 497

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|73990915|emb|CAJ28932.1| ATPase B subunit [Vitis vinifera]
          Length = 489

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|330815046|ref|YP_004358751.1| ATP synthase F1, beta subunit [Burkholderia gladioli BSR3]
 gi|327367439|gb|AEA58795.1| ATP synthase F1, beta subunit [Burkholderia gladioli BSR3]
          Length = 464

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 114/411 (27%), Positives = 188/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D +   G       Q  ++   IV    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPRDSMPKIYDALTLDGSELTLEVQ-QQLGDGIVRTICL 60

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G+   +       GR+++ LG+PID    + + +    I  K P 
Sbjct: 61  GASDGLRRGVAVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHLRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D     +E 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 357

Query: 371 KLV-SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G          + V +   I  FL Q 
Sbjct: 358 YTITRGVQQTLQRYKELRDIIAILGMDELS-PEDKQTVARARKIQRFLSQP 407


>gi|313504227|gb|ADR63863.1| ATP synthase B subunit [Parallela transversalis]
          Length = 399

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 104/375 (27%), Positives = 170/375 (45%), Gaps = 19/375 (5%)

Query: 61  QVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
           +V ++  D  V    +   + +  G  V   G    +       GR+ N LG+P+D    
Sbjct: 4   EVQQLLGDSCVRAVSMNPTDGLMRGMEVIDTGTPLTVPVGKATLGRIFNVLGEPVDNLGP 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +G  + S+ I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+
Sbjct: 64  VGNQE-SLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLI 122

Query: 179 SMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDES 227
                +         + + VGER RE  +   +               K  +V    +E 
Sbjct: 123 MELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEP 182

Query: 228 PILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++
Sbjct: 183 PGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTL 242

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G
Sbjct: 243 ATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKG 300

Query: 347 RYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPL S S +       +       ++   + R++E +DI  I G     +     
Sbjct: 301 IYPAVDPLDSTSTMLQPWIVGEKHYDCAQNVKKTLQRYKELQDIIAILGLDELSEED-RL 359

Query: 406 AVHQVPIIYDFLKQS 420
            V +   I  FL Q 
Sbjct: 360 VVARARKIERFLSQP 374


>gi|186886297|gb|ACC93551.1| ATPase F1 alpha subunit [Juncus bulbosus]
          Length = 355

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 3   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 62

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG+ +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 63  GKGALGEHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 121

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   VG++   V + ++     N    SV+V AT
Sbjct: 122 TAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANALDYSVLVAAT 181

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 182 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 241

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 242 GDVFYLHSRLLERASKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 301

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 302 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 353


>gi|4995794|emb|CAB44265.1| H(+)-transporting ATP synthase [Rulingia sp. Chase 2196]
          Length = 488

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L  RI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQGRI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|3850906|gb|AAC72145.1| ATP synthase beta subunit [Agastachys odorata]
          Length = 483

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|62085200|gb|AAX63004.1| ATP synthase beta subunit [Tetrorchidium sp. Bell 93-204]
          Length = 482

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-SRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|281423283|ref|ZP_06254196.1| ATP synthase F1, alpha subunit [Prevotella oris F0302]
 gi|281402619|gb|EFB33450.1| ATP synthase F1, alpha subunit [Prevotella oris F0302]
          Length = 528

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 91/430 (21%), Positives = 166/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L + V   + +  +      +  V+ +  D +    +G    I
Sbjct: 29  EVGTVLTVADGVARVYGL-RNVEASELLEFENG---TMAIVMNLEEDNIGCVLLGPTAGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +   D   M +  K P  + RQ
Sbjct: 85  KEGQTVKRTHRIASIRVNDNFLGRVVNPLGQAIDGLGDIDLTDAFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKSFYEAGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   ++          S++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVATLVQTLKEHGALPYSIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGYS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINNQQEIAEQMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L  +L  +G  P +
Sbjct: 325 DLPACMKGHVRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETNLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQIKSMKKVAGTLKLDMAQYRELE---AFSKFSSDMDAVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|254470785|ref|ZP_05084188.1| ATP synthase F1, beta subunit [Pseudovibrio sp. JE062]
 gi|211959927|gb|EEA95124.1| ATP synthase F1, beta subunit [Pseudovibrio sp. JE062]
          Length = 475

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 188/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    +   + + +      +  + +V   +  + V    +   E + 
Sbjct: 8   GQITQVIGAVVDVHFDGELPAILNALETDNGGNRLVLEVAQHLGENTVRTICMDASEGLV 67

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    + + D    I  + P  + +   
Sbjct: 68  RGQEVRDTGEPIAVPVGDGTLGRIMNVIGEPVDEAGPI-EHDAKRGIHQEAPAFVEQSTE 126

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 127 AEILPTGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 186

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    LT +TIAE F  KG 
Sbjct: 187 TREGNDLYWEMIESGVNKEKGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDKGQ 246

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  + K  G+IT+V
Sbjct: 247 DVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGGMQERITTTSK--GSITSV 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            +V V  D+  DP   S  + LD   VLNR++AE+G YP VDPL S SR+ D     D  
Sbjct: 305 QAVYVPADDLTDPAPASTFAHLDATTVLNRAIAEKGIYPAVDPLDSSSRMLDPRIIGDEH 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ +++   + R++  +DI  I G     +      V +   I  F+ Q 
Sbjct: 365 YEVATAVQETLQRYKSLQDIIAILGMDELSEED-KLVVARARKIERFMSQP 414


>gi|126728278|ref|ZP_01744094.1| F0F1 ATP synthase subunit beta [Sagittula stellata E-37]
 gi|126711243|gb|EBA10293.1| F0F1 ATP synthase subunit beta [Sagittula stellata E-37]
          Length = 474

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 182/417 (43%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + +        N   L     +  + V    +   E + 
Sbjct: 6   GKVTQVIGAVVDVQFDDHLPEILNALTTINNGNKLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V    G   +       GR++N +G+P+D    + + D    I +  P   ++   
Sbjct: 66  RGQEVVDTDGPISVPVGTATLGRIMNVIGEPVDEKGPV-EADEYRPIHAPAPNFADQATE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 AEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGLSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    LT +T+AE F     
Sbjct: 185 TREGNDLYHEMIESGVLTPDNLTDSKIALVYGQMNEPPGARARIALTGLTMAEQFRDATG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPQVIGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|156741253|ref|YP_001431382.1| F0F1 ATP synthase subunit alpha [Roseiflexus castenholzii DSM
           13941]
 gi|190358197|sp|A7NIR1|ATPA_ROSCS RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|156232581|gb|ABU57364.1| ATP synthase F1, alpha subunit [Roseiflexus castenholzii DSM 13941]
          Length = 526

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 100/440 (22%), Positives = 176/440 (40%), Gaps = 24/440 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ---GKNSDN 58
           Q+ L+++ +  +   K  +V  G +  +      ++ L Q     + +      G++   
Sbjct: 12  QRLLKSIREGVDLQPK--MVNVGTVIQVGDGVAKISGLEQ-AMASELLEFPPKAGRSEPV 68

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V    +G    I  GD V   GR           GRV+NALG+PIDG  
Sbjct: 69  FGIALNLEKDAVSAIILGDYLGIEEGDQVNSTGRVISAPVGQALIGRVVNALGQPIDGKG 128

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        I    P  + R+ V+   +TGI  ID   P+  GQR  +      GK+ +
Sbjct: 129 PIQTTKYR-PIERIAPGVITRKSVDTPVQTGIIAIDAMIPIGRGQRELIIGDRQTGKTAV 187

Query: 178 LSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
                 +        I   +G++  +V + I           ++VV AT+ ES  L+ +A
Sbjct: 188 AIDTIINQKGKGMVCIYVAIGQKRAQVAQIINFLEKYGAMDYTIVVSATASESAALQYIA 247

Query: 235 PLTAVTIAEYFSSKG--------DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           P     + E     G         + L++ D +++ A + R+++      P    YP  V
Sbjct: 248 PYAGCAMGEEVMENGVIIDGQEVRDALIVYDDLSKHATAYRQVSLLLRRPPGREAYPGDV 307

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER     ++   G++TA+  +    ++ +  I  +V SI DG I L   L  
Sbjct: 308 FYLHSRLLERAARLNEDYGGGSLTALPIIETQANDVSAYIPTNVISITDGQIYLETDLFN 367

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A +   + +   L   + +F   RD+     +   +D    
Sbjct: 368 AGIRPALNVGISVSRVGGAAQTRAMRSVSDRLKIDMAQF---RDLAAFAQFASDLDATTR 424

Query: 405 KAVHQVPIIYDFLKQSPSDL 424
             + +   + + LKQ     
Sbjct: 425 AQIERGQRLQEVLKQPQFQP 444


>gi|7708578|emb|CAB89975.1| ATP synthase beta subunit [Rinorea bengalensis]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|81301573|ref|YP_398870.1| ATP synthase CF1 beta subunit [Nicotiana tomentosiformis]
 gi|118573705|sp|Q33C27|ATPB_NICTO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|80750932|dbj|BAE48008.1| ATPase beta subunit [Nicotiana tomentosiformis]
          Length = 498

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V Q  + D++GQ I +  ++        V    
Sbjct: 21  GRVIQIIGPVLDVAFPPGKMPNIYNALVVQ--DRDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +   + +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|148252015|ref|YP_001236600.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. BTAi1]
 gi|190358204|sp|A5E950|ATPB1_BRASB RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|146404188|gb|ABQ32694.1| ATP synthase F1 subcomplex beta subunit [Bradyrhizobium sp. BTAi1]
          Length = 480

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 108/417 (25%), Positives = 184/417 (44%), Gaps = 22/417 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +   +  + +V   +    V    +   E 
Sbjct: 7   QIGRITQVIGAVVDVQFEGHLPAILNSLETKNAGNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+       GR+IN +G+PID    + K D    I  + P   ++ 
Sbjct: 67  LVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPV-KADSLRAIHQEAPSYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYLGDN------------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           ER RE  +   +++                 K  +V    +E P  R    LT +TIAE 
Sbjct: 186 ERTREGNDLYHEFIESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAED 245

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 246 FRDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTK 303

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V ++ V  D+  DP   +  + LD    L+RS+AE+G YP VDPL S SR+    
Sbjct: 304 GSITSVQAIYVPADDLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPL 363

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +   +  ++ R++  +DI  I G     +      V +   +  F+ Q 
Sbjct: 364 VVGEEHYAVARQVQQVLQRYKALQDIIAILGMDELSEED-KLTVARARKVERFMSQP 419


>gi|212896626|gb|ACJ38516.1| membrane-bound ATP synthase subunit B [Macrotyloma uniflorum]
          Length = 469

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 TFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|212896620|gb|ACJ38513.1| membrane-bound ATP synthase subunit B [Vigna unguiculata]
          Length = 470

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GHIDQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMQVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 TFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|194267364|gb|ACF35668.1| ATP synthase beta subunit [Virotia neurophylla]
          Length = 497

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917358|dbj|BAF40465.1| ATP synthase beta subunit [Baloghia inophylla]
 gi|155029329|dbj|BAF75548.1| ATP synthase beta subunit [Bertya sharpeana]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|75298751|sp|Q85V44|ATPB_EUCBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75328447|sp|Q85V45|ATPB_EUCMO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351893|emb|CAD48099.1| ATP synthase beta subunit [Eucomis montana]
 gi|30351895|emb|CAD48100.1| ATP synthase beta subunit [Eucomis bicolor]
          Length = 495

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EY       +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYIRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3850936|gb|AAC72160.1| ATP synthase beta subunit [Sphalmium racemosum]
          Length = 490

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6017810|gb|AAF01639.1| ATP synthase beta subunit [Limeum sp. Hoot 983]
          Length = 494

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|3850974|gb|AAC72179.1| ATP synthase beta subunit [Telopea sp. Weston s.n.]
          Length = 490

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNITESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|145630340|ref|ZP_01786121.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
 gi|145632746|ref|ZP_01788480.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655]
 gi|145634523|ref|ZP_01790232.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA]
 gi|145636253|ref|ZP_01791922.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH]
 gi|145640453|ref|ZP_01796037.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
 gi|148825242|ref|YP_001289995.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE]
 gi|229846566|ref|ZP_04466674.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1]
 gi|260582255|ref|ZP_05850048.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127]
 gi|166201709|sp|A5UA11|ATPB_HAEIE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|144984075|gb|EDJ91512.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021]
 gi|144986941|gb|EDJ93493.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655]
 gi|145268068|gb|EDK08063.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA]
 gi|145270418|gb|EDK10352.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH]
 gi|145275039|gb|EDK14901.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.4-21]
 gi|148715402|gb|ABQ97612.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE]
 gi|229810659|gb|EEP46377.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1]
 gi|260094623|gb|EEW78518.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127]
 gi|309972365|gb|ADO95566.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus
           influenzae R2846]
          Length = 457

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +     ++       GR++N LG+PID   ++G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|183206568|gb|ACC54482.1| ATP synthase beta subunit [Jasione laevis]
          Length = 479

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D LGQ I +  ++        V    
Sbjct: 2   GRIGQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYKEMKESGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|119368016|dbj|BAF40507.1| ATP synthase beta subunit [Bischofia javanica]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708268|emb|CAB90065.1| ATP synthase beta subunit [Dicella nucifera]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 48  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|319898003|ref|YP_004136200.1| f1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae F3031]
 gi|317433509|emb|CBY81892.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae F3031]
          Length = 457

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +     ++       GR++N LG+PID   ++G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|228016997|gb|ACP51820.1| ATP synthase CF1 alpha subunit [Pinus canariensis]
          Length = 507

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 98/424 (23%), Positives = 170/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +P           
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPX-XXXXXXXXX 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 126 XXXXXXXXXXXXISRRSVXEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|61968269|gb|AAX57061.1| ATP synthase beta subunit [Margaritaria cyanosperma]
          Length = 479

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|30351909|emb|CAD48107.1| ATP synthase beta subunit [Merwilla plumbea]
          Length = 494

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EY       +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYIRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|25808409|gb|AAN74331.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 350

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PID    
Sbjct: 1   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDSKGE 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 61  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 119

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 120 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 179

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 180 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 239

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 240 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 299

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 300 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 350


>gi|52843175|ref|YP_096974.1| F0F1 ATP synthase subunit beta [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295820|ref|YP_128235.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Lens]
 gi|54298986|ref|YP_125355.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Paris]
 gi|148361322|ref|YP_001252529.1| ATP synthase F1 subunit beta [Legionella pneumophila str. Corby]
 gi|296108663|ref|YP_003620364.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
           2300/99 Alcoy]
 gi|81822284|sp|Q5WSG8|ATPB_LEGPL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81822477|sp|Q5X0P3|ATPB_LEGPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81823315|sp|Q5ZRA1|ATPB_LEGPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201715|sp|A5III3|ATPB_LEGPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|52630286|gb|AAU29027.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|53752771|emb|CAH14206.1| hypothetical protein lpp3053 [Legionella pneumophila str. Paris]
 gi|53755652|emb|CAH17154.1| hypothetical protein lpl2910 [Legionella pneumophila str. Lens]
 gi|148283095|gb|ABQ57183.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta
           [Legionella pneumophila str. Corby]
 gi|295650565|gb|ADG26412.1| F-type H -transporting ATPase beta chain [Legionella pneumophila
           2300/99 Alcoy]
 gi|307611866|emb|CBX01582.1| hypothetical protein LPW_32691 [Legionella pneumophila 130b]
          Length = 458

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 109/405 (26%), Positives = 191/405 (47%), Gaps = 14/405 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G +  +      V      V  + D +  +  +SD + +V + +   +V    +G  + +
Sbjct: 4   GTVVEVIGAVVDVEFPRDSVPKVNDAL--KLVDSDLVFEVQQQLGDGVVRTIAMGTTDGL 61

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G    + G   ++       GR+++ LG+P+D    +   + +  I  K P    +  
Sbjct: 62  KRGLKAENTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPIDAEE-TWAIHRKAPSYEEQAG 120

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGE
Sbjct: 121 SQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 180

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL +
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFI 240

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V 
Sbjct: 241 DNIYRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVP 298

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSS 375
            D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D      +       
Sbjct: 299 ADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARR 358

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 359 VQQTLQRYKELKDIIAILGMDELSEED-KRVVTRARKIQRFLSQP 402


>gi|22711896|ref|NP_683810.1| ATP synthase CF1 beta subunit [Chaetosphaeridium globosum]
 gi|23813703|sp|Q8SLY2|ATPB_CHAGL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|22416900|gb|AAM96500.1| CF1 beta subunit of ATP synthase [Chaetosphaeridium globosum]
          Length = 493

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 114/426 (26%), Positives = 187/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S     + G I+ I      V   S  +  + + +V +GKN+     D   +V ++  D 
Sbjct: 11  STVTSKKVGRITQIIGPVMDVAFPSGNMPNIYNALVVKGKNAAGQDIDVTCEVQQLLGDN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  
Sbjct: 71  KVRAVAMSATDGLMRGMDVIDTGSALSVPVGEVTLGRIFNVLGEPVDNMGPVNAT-VTSP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 190 AHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLGESKVALVYGQMNEPPGARMRVGL 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|315585806|gb|ADU40187.1| H(+)-transporting two-sector ATPase [Helicobacter pylori 35A]
          Length = 434

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|228961569|ref|ZP_04123178.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229050976|ref|ZP_04194525.1| ATP synthase subunit beta [Bacillus cereus AH676]
 gi|229130555|ref|ZP_04259511.1| ATP synthase subunit beta [Bacillus cereus BDRD-Cer4]
 gi|228652894|gb|EEL08776.1| ATP synthase subunit beta [Bacillus cereus BDRD-Cer4]
 gi|228722353|gb|EEL73749.1| ATP synthase subunit beta [Bacillus cereus AH676]
 gi|228798051|gb|EEM45055.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 459

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  L 
Sbjct: 39  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGELP 98

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 99  ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 158

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 159 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 218

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 219 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 278

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 279 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 336

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 337 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 395

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 396 FFLSQN 401


>gi|183206678|gb|ACC54537.1| ATP synthase beta subunit [Campanula spatulata subsp. filicaulis]
          Length = 498

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3850966|gb|AAC72175.1| ATP synthase beta subunit [Euplassa inaequalis]
          Length = 490

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESEVINKQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|16272426|ref|NP_438639.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae Rd KW20]
 gi|68249081|ref|YP_248193.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 86-028NP]
 gi|145628859|ref|ZP_01784659.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21]
 gi|145638605|ref|ZP_01794214.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII]
 gi|229844360|ref|ZP_04464500.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1]
 gi|260580457|ref|ZP_05848285.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW]
 gi|319775594|ref|YP_004138082.1| F1 sector of membrane-bound ATP synthase subunit beta [Haemophilus
           influenzae F3047]
 gi|329122360|ref|ZP_08250947.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC
           11116]
 gi|2506208|sp|P43715|ATPB_HAEIN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81336513|sp|Q4QN64|ATPB_HAEI8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|1573457|gb|AAC22137.1| ATP synthase F1, subunit beta (atpD) [Haemophilus influenzae Rd
           KW20]
 gi|68057280|gb|AAX87533.1| ATP synthase beta chain [Haemophilus influenzae 86-028NP]
 gi|144979329|gb|EDJ89015.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21]
 gi|145272200|gb|EDK12108.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII]
 gi|229812609|gb|EEP48298.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1]
 gi|260092799|gb|EEW76734.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW]
 gi|301169199|emb|CBW28796.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae 10810]
 gi|309750106|gb|ADO80090.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus
           influenzae R2866]
 gi|317450185|emb|CBY86401.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus
           influenzae F3047]
 gi|327473642|gb|EGF19061.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC
           11116]
          Length = 457

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +     ++       GR++N LG+PID   ++G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNNPIQVPVGTKTLGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|313204906|ref|YP_004043563.1| ATP synthase f1, alpha subunit [Paludibacter propionicigenes WB4]
 gi|312444222|gb|ADQ80578.1| ATP synthase F1, alpha subunit [Paludibacter propionicigenes WB4]
          Length = 530

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 170/436 (38%), Gaps = 36/436 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  ++     +  L +     + +  +         V+ +  D V    +G   +I
Sbjct: 29  EVGTVLQVSDGVVRIYGL-RNAEANELLEFENG---IKAIVMNLEEDNVGAVLLGPTSQI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V    R   I+      GRVIN LG+P+DG   +    + M +  K P  + RQ 
Sbjct: 85  KEGFTVKRTKRVASINVGEGMLGRVINPLGEPLDGKGKISGEMVEMPLERKAPGVIYRQP 144

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD--KVIIS 193
           V +  +TG++ +D   P+  GQR  +      GK      T+++  +  D  D    I  
Sbjct: 145 VNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTSVAIDTIINQRSNYDAGDPVYCIYV 204

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++G  V   +           +V+V AT+ +   L+  AP    +I E+F   G + 
Sbjct: 205 AIGQKGSTVASILNTLQEHGAMDYTVIVSATASDPAALQYYAPFAGASIGEFFRDTGRHA 264

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE----------- 301
           L++ D +++ A + RE++           YP  +F    RLLER                
Sbjct: 265 LVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAARVISQQEVAEQMND 324

Query: 302 ---------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
                    K  G++TA+  +     + +  I  +V SI DG I L+  L  +G  P ++
Sbjct: 325 LPDSLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLDTDLFNQGNRPAIN 384

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  +L     +F E         +   +D +    + +   
Sbjct: 385 VGISVSRVGGNAQIKAMKKVAGTLKIDQAQFRELE---AFTKFGGDMDAVTAMTIDKGQK 441

Query: 413 IYDFLKQSPSDLSSED 428
               L Q+  +    +
Sbjct: 442 NTRLLVQALHEPLPVE 457


>gi|294790385|ref|ZP_06755543.1| ATP synthase F1, alpha subunit [Scardovia inopinata F0304]
 gi|294458282|gb|EFG26635.1| ATP synthase F1, alpha subunit [Scardovia inopinata F0304]
          Length = 567

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 176/439 (40%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    E Y+       + GY+ +       V  L       + +  +      LG   
Sbjct: 13  QALDNFVESYTPTSAPTQEVGYVKTAGDGIAQVEGL-PGCMANELLTFEDG---TLGLAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGSPIDGLGPI-AS 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    + ++ P  M+R  V++  +TGI+ ID  TP+  GQR  +      GK      T+
Sbjct: 128 EGRRILEAQAPDVMHRHPVDQPMETGIKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++     +  D     + I   VG++G  +               + +V + + +S   +
Sbjct: 188 INQKKNWESGDPNKQVRCIYVAVGQKGSTIAAVRASLEDAGAMAYTTIVASPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  KG +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YIAPYTGSAIGQHWMYKGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCARLSDDMGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   KK+  +L   + ++       +   +   +D      + +
Sbjct: 368 AVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLTR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ      S +
Sbjct: 425 GARLMELLKQPQFSPYSSE 443


>gi|257852928|gb|ACV71475.1| ATP synthase beta subunit [Anthodiscus amazonicus]
          Length = 485

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   +   ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYSALIVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHKPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|226441961|gb|ACO57570.1| F1 ATP synthase beta subunit [Gillichthys seta]
          Length = 505

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 108/412 (26%), Positives = 188/412 (45%), Gaps = 18/412 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +  +G++S  + +V   +    V    +   E +
Sbjct: 37  SGRIVAVIGAVVDVQFDEGLPPILNALEVKGRDSRLVLEVAQHLGESTVRTIAMDGTEGL 96

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +     +  I ++ P   +   
Sbjct: 97  VRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPIS-TKQTAPIHAEAPEFTDMSV 155

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 156 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 215

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 216 RTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 275

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 276 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 333

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 334 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAE 393

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 394 HYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 444


>gi|195450700|ref|XP_002072595.1| GK13685 [Drosophila willistoni]
 gi|194168680|gb|EDW83581.1| GK13685 [Drosophila willistoni]
          Length = 506

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +    ++   + +V   +  + V    +   E +
Sbjct: 38  NGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 97

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI   A   GR+IN +G+PID    +   D +  I ++ P  +    
Sbjct: 98  VRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSV 156

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 157 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 216

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 217 RTREGNDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 276

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 277 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITS 334

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 335 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQE 394

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 395 HYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 450

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 451 VFTGHAGKL 459


>gi|155029337|dbj|BAF75552.1| ATP synthase beta subunit [Ditta myricoides]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-SRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|139389808|ref|YP_001123469.1| ATP synthase CF1 beta subunit [Crucihimalaya wallichii]
 gi|190358662|sp|A4QKT8|ATPB_CRUWA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286670|dbj|BAF50293.1| ATPase beta subunit [Crucihimalaya wallichii]
          Length = 498

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917356|dbj|BAF40464.1| ATP synthase beta subunit [Adenocline acuta]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-SRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPKIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14717948|gb|AAK72716.1| ATP synthase beta subunit [Balanops vieillardii]
          Length = 485

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|24940258|emb|CAD43387.1| ATP synthase beta subunit [Pentaglottis sempervirens]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62184040|gb|AAX73331.1| ATP synthase beta subunit [Banksia grandis]
          Length = 497

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKLPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085129|gb|AAX62970.1| ATP synthase beta subunit [Endospermum moluccanum]
          Length = 482

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|323715500|gb|ADY04818.1| ATP synthase beta subunit [Eucnide urens]
          Length = 486

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|257852968|gb|ACV71495.1| ATP synthase beta subunit [Froesia diffusa]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|208435290|ref|YP_002266956.1| flagellum-specific ATP synthase [Helicobacter pylori G27]
 gi|208433219|gb|ACI28090.1| flagellum-specific ATP synthase [Helicobacter pylori G27]
          Length = 434

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGAECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILK 434


>gi|34500018|gb|AAQ73591.1| ATP synthase beta subunit [Bisgaard Taxon 7]
          Length = 444

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 187/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+   N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYDALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +  +   +       GR++N LG+PID    +G  + +  I    P  
Sbjct: 56  TSDGLKRGLSVSNTNKPITVPVGTKTLGRIMNVLGEPIDEKGPIGAEE-NWSIHRAPPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    + L K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMSDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     +E  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGEEHY 352

Query: 372 -LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 NVARGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|15425584|emb|CAC60329.1| ATP synthase beta subunit [Levenhookia pauciflora]
          Length = 496

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  G+ + ++ ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGEPMNVSCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYKTAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7708464|emb|CAB89921.1| ATP synthase beta subunit [Koelreuteria paniculata]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V  L  +   + + +V +G+N   +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVDFLPGEMPNIYNALVVRGRN--TVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|5758921|gb|AAD50895.1| ATP synthase beta subunit [Zingiber gramineum]
          Length = 485

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    I       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSIPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKFLIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 434


>gi|5758907|gb|AAD50881.1| ATP synthase beta subunit [Ravenala madagascariensis]
          Length = 496

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPIDNLGPVDTSTTS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|23015479|ref|ZP_00055254.1| COG0055: F0F1-type ATP synthase, beta subunit [Magnetospirillum
           magnetotacticum MS-1]
          Length = 474

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/428 (25%), Positives = 191/428 (44%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    Q   +   +  + +    + +V   +    V    +   + ++
Sbjct: 7   GTITQVLGAVVDVRFDGQLPAILSALHLEHQGKKLVLEVAQHLGESTVRTIAMDSTDGLT 66

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR+IN +G+PID    +G    ++ I +  P  +++   
Sbjct: 67  RGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIG-NKTTLPIHADAPDFVDQSTE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P C G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 TEILVTGIKVIDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 185

Query: 199 GREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +   +        K  +V    +E P  R    L+ +T+AEYF      
Sbjct: 186 TREGNDLYHEMIESGVIKLDGPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDVEGQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VLNR +AE G YP VDPL S SR+ D      D 
Sbjct: 304 QAIYVPADDLTDPAPATSFAHLDATTVLNRQIAELGIYPAVDPLDSTSRVLDPRVVGNDH 363

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            +    +  ++  ++  +DI  I G     +      V +   I  FL Q        ++
Sbjct: 364 YQTARDVQRILQTYKSLQDIIAILGMDELSEED-KLVVTRARKIQRFLSQP---FHVAEI 419

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 420 FTGSPGKL 427


>gi|260466814|ref|ZP_05812999.1| ATP synthase F1, beta subunit [Mesorhizobium opportunistum WSM2075]
 gi|259029426|gb|EEW30717.1| ATP synthase F1, beta subunit [Mesorhizobium opportunistum WSM2075]
          Length = 524

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 106/411 (25%), Positives = 186/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G +  +      V        + + +      +  + +V   +  + V    +   E + 
Sbjct: 57  GQVRQVIGAVVDVQFGEHLPAILNALETTNVGNRLVLEVAQHLGENTVRCIAMDSTEGLV 116

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+IN +G+P+D    +   ++   I    P  + +   
Sbjct: 117 RGQEVRDTGAPITVPVGPGMLGRIINVIGEPVDEAGPVDAIEMR-SIHQPAPTYVEQSTE 175

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 176 AQILITGIKVLDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGER 235

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   +++        G    K+ +V    +E P  R    LT +T+AEYF  +G 
Sbjct: 236 TREGNDLYHEFIESGVNKKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQ 295

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 296 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSV 353

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            ++ V  D+  DP   +  + LD    LNR++AE+G YP VDPL S SR+ D     +E 
Sbjct: 354 QAIYVPADDLTDPAPATSFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPMVVGEEH 413

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +    + V +   I  FL Q 
Sbjct: 414 YGVARQVQSILQRYKSLQDIIAILGMDELSEED-KQTVARARKIERFLSQP 463


>gi|257852926|gb|ACV71474.1| ATP synthase beta subunit [Ploiarium alternifolium]
          Length = 488

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|170784769|ref|YP_001718685.1| ATP synthase CF1 beta subunit [Trachelium caeruleum]
 gi|156598793|gb|ABU85650.1| ATP synthase CF1 beta subunit [Trachelium caeruleum]
 gi|157267517|gb|ABV26510.1| ATP synthase CF1 beta subunit [Trachelium caeruleum]
 gi|183206660|gb|ACC54528.1| ATP synthase beta subunit [Trachelium caeruleum]
          Length = 498

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|155029347|dbj|BAF75557.1| ATP synthase beta subunit [Klaineanthus gaboniae]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRAKSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|90994450|ref|YP_536940.1| ATP synthase CF1 beta subunit [Porphyra yezoensis]
 gi|118573718|sp|Q1XDM8|ATPB_PORYE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|90819014|dbj|BAE92383.1| ATP synthase CF1 beta chain [Porphyra yezoensis]
          Length = 475

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 182/419 (43%), Gaps = 20/419 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           +     G ++ I      +     Q   + + +  Q        +V ++  D  V    +
Sbjct: 3   STTKSTGSVTQIIGPVLDIAFPNGQLPKVFNALKVQSSEGTITCEVQQLLGDNKVRAVSM 62

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G    +       GR+ N LG+P+D    +   + ++ I    P 
Sbjct: 63  SSTEGLQRGVEVIDTGSPISVPVGTDTLGRIFNVLGEPVDNLGPVD-SESTLPIHRPAPA 121

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
               +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 122 FTKLETKPNIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 181

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 182 FGGVGERTREGNDLYMEMKESKVIDADNLKESKVALVYGQMNEPPGARMRVGLTALTMAE 241

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 242 YFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TST 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP+  +  + LD   VL+R+LA +G YP VDPL S S +  
Sbjct: 300 TEGSITSIQAVYVPADDLTDPVPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQ 359

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +       +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 360 PGIVGTEHYSTAQEVKSTLQRYKELQDIIAILGLDELSEED-RQTVSRARKIERFLSQP 417


>gi|56675895|emb|CAB89929.2| ATP synthase beta subunit [Asparagus officinalis]
          Length = 487

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 184/422 (43%), Gaps = 29/422 (6%)

Query: 22  QGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYI 72
             G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V  
Sbjct: 17  SXGRIAQIIGPVLDVVFPPGKLPXIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRA 74

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I   
Sbjct: 75  VAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRS 133

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 134 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 193

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 194 VSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALT 253

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 254 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 311

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 312 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 371

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 372 MLQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLS 430

Query: 419 QS 420
           Q 
Sbjct: 431 QP 432


>gi|34500030|gb|AAQ73597.1| ATP synthase beta subunit [Pasteurella pneumotropica]
          Length = 444

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 13/403 (3%)

Query: 25  YISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
            I  I      V      V  + D +  +   +  + Q +     +V    +G  + +  
Sbjct: 5   KIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGTSDGLKR 62

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V + G   ++       GR++N LG+PID    +G  + +  I    P    +    
Sbjct: 63  GLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDERGEIGAEE-NWSIHRAAPSYEEQSNST 121

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERG 199
           +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGER 
Sbjct: 122 ELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERT 181

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  +D+
Sbjct: 182 REGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDN 241

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V  D
Sbjct: 242 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPAD 299

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLT 377
           +  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +   + 
Sbjct: 300 DLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQ 359

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 GILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|3850948|gb|AAC72166.1| ATP synthase beta subunit [Austromuellera trinervia]
 gi|3850970|gb|AAC72177.1| ATP synthase beta subunit [Helicia australasica]
 gi|3850972|gb|AAC72178.1| ATP synthase beta subunit [Hollandaea riparia]
          Length = 490

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|28940|emb|CAA27246.1| unnamed protein product [Homo sapiens]
 gi|219654|dbj|BAA00016.1| F1 beta subunit [Homo sapiens]
 gi|355039|prf||1202298A ATPase beta,F1
          Length = 539

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 68  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 127

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 128 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFMEM 186

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 187 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 246

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    ++ P  R    LT +T+AEYF  +
Sbjct: 247 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNQPPGARARVALTGLTVAEYFRDQ 306

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 307 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 365 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 424

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 425 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 477


>gi|113910866|gb|ABI48165.1| ATPase beta subunit [Grimmia sp. Qiu 01090]
          Length = 472

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVEGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGGPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|62184044|gb|AAX73333.1| ATP synthase beta subunit [Banksia ericifolia]
 gi|62184046|gb|AAX73334.1| ATP synthase beta subunit [Banksia brownii]
 gi|62184052|gb|AAX73337.1| ATP synthase beta subunit [Banksia nutans]
 gi|62184056|gb|AAX73339.1| ATP synthase beta subunit [Banksia pulchella]
 gi|62184074|gb|AAX73348.1| ATP synthase beta subunit [Musgravea heterophylla]
          Length = 497

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62184050|gb|AAX73336.1| ATP synthase beta subunit [Banksia dryandroides]
          Length = 497

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|114567888|ref|YP_755042.1| F0F1 ATP synthase subunit beta [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|122317245|sp|Q0AUD3|ATPB_SYNWW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114338823|gb|ABI69671.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 476

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/419 (26%), Positives = 192/419 (45%), Gaps = 23/419 (5%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDN----LGQV-IRIN------LD 68
           V  G ++ +      +     +   L + +  +    D     + ++ + +        D
Sbjct: 4   VTYGEVTQVIGAVVDIRFKPGELPDLMNAITIRSSEQDAGFTAVAEIDVMLEAMQLLGND 63

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +   + IS G    + G   +I       GR++N LG+P+D    +   D   E
Sbjct: 64  VVRCVALQPTDGISRGMKAVNTGAAIKIPVGEGCLGRILNVLGQPVDEAGPVNASDY-WE 122

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  K P  + +    +  +TGI+V D+  P   G +IG+F G+G+GK+ ++    R+  +
Sbjct: 123 IHRKPPALVEQLPATQQLETGIKVADLICPYAKGGKIGLFGGAGVGKTVIIQELIRNIAY 182

Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +    S+   VGER RE  +   +      + K  ++    +E P  R    LT +T+AE
Sbjct: 183 EHGGYSVFTGVGERTREGNDLWGEMTESGVIDKCALIFGQMNEPPGARLRVGLTGMTVAE 242

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VL+ +D+I RFA +  E++   G +P A GY  ++ +++  L ERI  +  
Sbjct: 243 YFRDFSGLDVLIFIDNIFRFAQAGNEVSALLGRMPSAVGYQPTLATDMGYLQERI--TST 300

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT+  +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D
Sbjct: 301 RKGSITSAQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRILD 360

Query: 363 KAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                D        +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 361 PQVVGDKHYDTARGVQKILQRYKELQDIIAILGMDELSDED-KLIVARARKIQRFLSQP 418


>gi|332969727|gb|EGK08741.1| ATP synthase F1 sector beta subunit [Kingella kingae ATCC 23330]
          Length = 465

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG P+D    +G  D
Sbjct: 45  LGDGVVRTIAMGSTDGLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGPIG-SD 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 QTRAIHQPAPKFDELSSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           ++AE+F  + D           +D+I R+  +  E++   G +P A GY  ++  E+ RL
Sbjct: 224 SMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 283

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 284 QERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDP 341

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR  D      +   +   +   + +++E RDI  I G     D      V +   
Sbjct: 342 LDSTSRQLDPMVLGQEHYDVARGVQATLQKYKELRDIIAILGMDELSDED-KLTVMRARK 400

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 401 IQRFLSQP 408


>gi|163869185|ref|YP_001610437.1| F0F1 ATP synthase subunit beta [Bartonella tribocorum CIP 105476]
 gi|190358258|sp|A9IYW6|ATPB_BART1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|161018884|emb|CAK02442.1| ATP synthase beta chain [Bartonella tribocorum CIP 105476]
          Length = 541

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/444 (24%), Positives = 194/444 (43%), Gaps = 29/444 (6%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVY 71
           E+ +K  V   G I  +      V        + + +  +   +  + +V   +  + V 
Sbjct: 61  EERAKGTV---GEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVR 117

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G +  +       GR++N +G+P+D    +     +  I  
Sbjct: 118 TIAMDTTDGLMRGQKVVDTGAQISVPVGEATLGRIMNVIGEPVDNVGPIASTK-TRSIHQ 176

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  + +  V +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 177 EAPEYVEQSTVSEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHG 236

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMA 234
              + + VGER RE  +   + +   +              K  +V    +E P  R   
Sbjct: 237 GYSVFAGVGERTREGNDLYYEMIESGVNVNPKENNGSTEGSKCALVYGQMNEPPGARARV 296

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            L+ +TIAE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L 
Sbjct: 297 ALSGLTIAESFRDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQ 356

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL
Sbjct: 357 ERI--TSTKIGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPL 414

Query: 355 ASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D     +E   +   +  ++ R+   +DI  I G     +      V +   I
Sbjct: 415 DSFSRMLDPLIVGEEHYTVACQVQTILQRYRALQDIIAILGMDELSEDD-KLLVGRARKI 473

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q        + F     KL
Sbjct: 474 ERFLSQP---FHVAEAFTGSPGKL 494


>gi|14718134|gb|AAK72806.1| ATP synthase beta subunit [Mitchella repens]
          Length = 478

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   +  +  + D +V    + D +GQ I +  ++        V    
Sbjct: 9   GRIVQIIGPVLDVAFPAGKMPNIYDALVV--XSRDTVGQSINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID          +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGP-XDTRTTAPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELITNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 422


>gi|15425570|emb|CAC60321.1| ATP synthase beta subunit [Dampiera spicigera]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G   D LGQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGQMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 70  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTSTTS-PIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYIEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNGQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|6017794|gb|AAF01631.1| ATP synthase beta subunit [Corylopsis pauciflora]
          Length = 482

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 5   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL  D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFXDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|121602257|ref|YP_988452.1| F0F1 ATP synthase subunit beta [Bartonella bacilliformis KC583]
 gi|190358257|sp|A1UR49|ATPB_BARBK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120614434|gb|ABM45035.1| ATP synthase F1, beta subunit [Bartonella bacilliformis KC583]
          Length = 537

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 107/433 (24%), Positives = 187/433 (43%), Gaps = 26/433 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I  +      V        + + +      S  + +V   +  + V    +   + + 
Sbjct: 64  GEIKQVIGAIVDVQFEGALPNILNALETDRLGSRLILEVAQHLGENTVRTIAMDTTDGLV 123

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  VF  G +  +       GR++N +G+P+D    +     +  I  K P  + +   
Sbjct: 124 RGQKVFDTGTQICVPVGEATLGRIMNVIGEPVDEVGPIVTTK-TRSIHQKAPEYIEQSTE 182

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 183 SEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 242

Query: 199 GREVREFIEDYLGD-------------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +                  K  +V    +E P  R    L+ +TIAE F
Sbjct: 243 TREGNDLYYEMIESRVNVNPKENDGSTKGSKCALVYGQMNEPPGARARVALSGLTIAENF 302

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G
Sbjct: 303 RDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTG 360

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D   
Sbjct: 361 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLV 420

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q     
Sbjct: 421 VGEEHYAVACQVQTILQRYKALQDIIAILGMDELSEED-KLLVGRARRIERFLSQP---F 476

Query: 425 SSEDVFQEITKKL 437
              + F     KL
Sbjct: 477 HVAEAFTGSPGKL 489


>gi|294789023|ref|ZP_06754263.1| ATP synthase F1, beta subunit [Simonsiella muelleri ATCC 29453]
 gi|294483125|gb|EFG30812.1| ATP synthase F1, beta subunit [Simonsiella muelleri ATCC 29453]
          Length = 465

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG P+D    +G  +
Sbjct: 45  LGDGVVRTIAMGSTDGLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGPIGSNE 104

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 105 -TRAIHQPAPKFDELSSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           ++AE+F  + D           +D+I R+  +  E++   G +P A GY  ++  E+ RL
Sbjct: 224 SMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 283

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 284 QERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDP 341

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR  D      +   +   +   + +++E RDI  I G     D      V +   
Sbjct: 342 LDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARK 400

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 401 IQRFLSQP 408


>gi|317048602|ref|YP_004116250.1| flagellar protein export ATPase FliI [Pantoea sp. At-9b]
 gi|316950219|gb|ADU69694.1| flagellar protein export ATPase FliI [Pantoea sp. At-9b]
          Length = 453

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 230/423 (54%), Gaps = 17/423 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICP 74
            V + G +   T +    T L   + LG   + +  +   +     +V+  N   +++ P
Sbjct: 24  TVRRYGRLVRATGLVLEATGL--QLPLGATCIIERHDGATITEVESEVVGFNGQKLFLMP 81

Query: 75  VGIGEEISLGDLVF--------HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           +   + I  G  V+        H G+  +        RV++  GKP+DG  S   G    
Sbjct: 82  LEEVDGILPGARVYARVTGDNAHSGKQLLLGPQLLG-RVLDGSGKPLDGLPSPDTG-YRA 139

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +++     + R  +E    TG+R I+    +  GQR+G+FAGSG+GKS LL M AR   
Sbjct: 140 PLITAPFNPLQRTPIEDVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTK 199

Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            D +++ L+GERGREV+EFIE+ LG +   +SVV+ A +D SP+LR      A  IAE F
Sbjct: 200 ADVIVVGLIGERGREVKEFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDF 259

Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
             +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G
Sbjct: 260 RDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGTHGGG 319

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR      
Sbjct: 320 SITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALI 379

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +    V     L+  F+  RD+  +G Y  G D +LD+A+   P +  FL+Q   + S
Sbjct: 380 DENHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDPMLDRAIKLYPQMEAFLQQGIFERS 439

Query: 426 SED 428
             D
Sbjct: 440 DYD 442


>gi|114509212|gb|ABI75174.1| ATPase alpha subunit [Limnocharis flava]
          Length = 361

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 161/365 (44%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L +    G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGLKEIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL + +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGKGSLSENE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+++     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNQKAKANEKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +    G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSESTGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|118917370|dbj|BAF40484.1| ATP synthase beta subunit [Lacistema aggregatum]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDDLGPVDTCTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNVAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|28572496|ref|NP_789276.1| F0F1 ATP synthase subunit alpha [Tropheryma whipplei TW08/27]
 gi|161486573|ref|NP_787554.2| F0F1 ATP synthase subunit alpha [Tropheryma whipplei str. Twist]
 gi|81629885|sp|Q83HY2|ATPA_TROW8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|109939722|sp|Q83G89|ATPA_TROWT RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|28410628|emb|CAD67014.1| ATP synthase alpha chain [Tropheryma whipplei TW08/27]
          Length = 542

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 90/426 (21%), Positives = 167/426 (39%), Gaps = 21/426 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +         +  L   +   + V          G  + ++ D+  +  +G  + I
Sbjct: 34  EVGRVVDAADGVAHIEGL-PALMASELVEFSNG---TFGVTLNLDEDLAGVVVLGEFDGI 89

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   GR   I     + GRV++ LG+P+DG   +   +   E+  +    M R+ 
Sbjct: 90  VEGMDVRSTGRVLSIPVGDAFLGRVVDPLGRPVDGLGEV-PHETYRELELQAAGVMQRRS 148

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--------KVII 192
           V +  +TGI+ ID   P+  GQR  +      GK+T+      +   +          I 
Sbjct: 149 VHEPIQTGIKAIDTMIPIGRGQRQLIIGDRQTGKTTIAIDTIINQKDNWSDPEKRVFCIY 208

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++G  +               + +V   + +    + +AP +   I +++  +G +
Sbjct: 209 VAIGQKGSTIAGVKRVLEEAGCMEYTTIVATPASDPAGFKYIAPYSGSAIGQHWMYQGRH 268

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
           VL++ D +++ A + R I+      P    YP  VF    RLLER      E   G++T 
Sbjct: 269 VLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDEMGGGSMTG 328

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A     
Sbjct: 329 LPIIETKANDISAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGDAQIKSI 388

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL-KQSPSDLSSED 428
           KK+   L   + ++           +   +D +  + + +   + + L +Q  S    ED
Sbjct: 389 KKVSGMLKLELAQYRALE---AFSMFASDLDAVSRRQLDRGARLSELLRQQQQSPYPVED 445

Query: 429 VFQEIT 434
               I 
Sbjct: 446 QVVSIW 451


>gi|7708187|emb|CAB90037.1| ATP synthase beta subunit [Carallia brachiata]
          Length = 489

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/417 (26%), Positives = 182/417 (43%), Gaps = 28/417 (6%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGI 77
           +  I  V        Q   + + +V +G+  D +GQ I +  ++        V    +  
Sbjct: 16  VXXIGPVLXVAFPPGQMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSA 73

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +
Sbjct: 74  TDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVN-SRTTSPIHRSAPAFI 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 133 QLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 192

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 193 GVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYF 252

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++
Sbjct: 253 RDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKE 310

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 311 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQ 370

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 IVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|171110|gb|AAA34444.1| F1-ATPase beta-subunit precursor [Saccharomyces cerevisiae]
          Length = 511

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 114/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G ++++      V    S+   + + +  +      + +V   +  + V    +   E 
Sbjct: 43  TGKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEG 102

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G+ V   G    +       GR+IN +G+PID    + K  L   I +  P    + 
Sbjct: 103 LVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQS 161

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +         + + VG
Sbjct: 162 TSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAGVG 221

Query: 197 ERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           ER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +  
Sbjct: 222 ERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEG 281

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+
Sbjct: 282 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTS 339

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    +
Sbjct: 340 VQAVYVPADDLTDPSPSTSFAHLDASSVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQE 399

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + S +   +  ++  +DI  I G     +      V +   I  FL Q     +  +
Sbjct: 400 HYDVASKVQETLQTYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAVAE 455

Query: 429 VFQEITKKL 437
           VF  I  KL
Sbjct: 456 VFTGIPGKL 464


>gi|66276287|gb|AAY44158.1| ATP synthase beta subunit [Neoalsomitra sarcophylla]
          Length = 484

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|62184054|gb|AAX73338.1| ATP synthase beta subunit [Banksia tricuspis]
          Length = 497

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|728922|sp|P41009|ATPB_BACCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|533290|dbj|BAA07248.1| ATPase subunit beta [Bacillus caldotenax]
          Length = 473

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID +  + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+ T++ ++ V  D++ DP   +  S LD    L R++AE G YP VDPLA
Sbjct: 291 RI--TSTAKGSTTSIQAIYVPADDYTDPAPATTFSHLDATTNLERNVAEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|28202179|ref|NP_777420.1| ATP synthase CF1 beta subunit [Anthoceros formosae]
 gi|3915617|sp|Q31794|ATPB_ANTFO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|2760294|dbj|BAA24160.1| ATPase beta subunit [Anthoceros formosae]
 gi|27807881|dbj|BAC55356.1| ATPase beta subunit [Anthoceros formosae]
 gi|27808010|dbj|BAC55452.1| ATPase beta subunit [Anthoceros formosae]
          Length = 492

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 188/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S  +    G+IS I      VT    +   + + ++ +G+N    GQ I +  ++     
Sbjct: 11  STLISKNVGHISQIIGPVLDVTFPPGKMPNIYNSLIVRGQNPA--GQEINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + ++ G  V   G    +       GR+ N LG+P+D   ++     +
Sbjct: 69  NNKVRAVAMSATDGLTRGMKVTDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGAID-VSTT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQDISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|257852944|gb|ACV71483.1| ATP synthase beta subunit [Moultonianthus leembruggianus]
          Length = 497

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|209545561|ref|YP_002277790.1| flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209533238|gb|ACI53175.1| ATPase, FliI/YscN family [Gluconacetobacter diazotrophicus PAl 5]
          Length = 455

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 175/445 (39%), Positives = 256/445 (57%), Gaps = 21/445 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIRINLDIV 70
           A  +   + V  G ++ ++ +  +++ L  +  +GD V   G    +   +++    D  
Sbjct: 7   APRHDVPVGVLEGRVTGLSGLTVSLSGLRDFTGVGDRVAIFGLDGRETDAEIVAFRGDTA 66

Query: 71  YICPVGIGEEISLGDL------------VFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
              P G  E I  G                  G      +  W GRVI+ +G+PIDG   
Sbjct: 67  IAMPYGSLEGIGSGCRAMFQLFDPEQRRRRAGGTL--VVNDAWQGRVIDPMGRPIDGKGP 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L    +  ++ +  P A  R R+      G+RV+++F     GQR+G+FAGSG+GKSTL+
Sbjct: 125 LPPDGVPQKLHAPPPEAALRARLGPRIDLGVRVLNLFATCREGQRLGLFAGSGVGKSTLM 184

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+LVGERGREVREF+ED LG + L KSVVVVATSD SP++R+ A   
Sbjct: 185 GMLARNTDCDVAVIALVGERGREVREFVEDDLGPEGLAKSVVVVATSDTSPLMRREAAYA 244

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A   AE+F  +G +VLL++DS+TRF  ++REI  +SGE P  RGYP SVF+ELPRLLER 
Sbjct: 245 ATAAAEHFRDQGKSVLLLMDSVTRFCQALREIGLSSGEPPATRGYPPSVFAELPRLLERA 304

Query: 298 GPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           GP     + + G ITA+ SVLV+GD+HN+P+AD+VR ILDGH+V+ R +AE GRYP ++ 
Sbjct: 305 GPGLPGPDGKAGQITAMFSVLVEGDDHNEPVADAVRGILDGHVVMERRIAESGRYPAINV 364

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR      SA+E  L       +  +EE +D+  +G YR G D  +D+A+   P I
Sbjct: 365 LRSLSRTVPGCNSAEENALTRDARADLSTWEEMQDMVRLGAYRAGNDPKVDQAIRIAPAI 424

Query: 414 YDFLKQSPSDLSS-EDVFQEITKKL 437
            + L+Q   + ++  + F  +   L
Sbjct: 425 EEILRQGRGEKATIAESFDALRAAL 449


>gi|61968219|gb|AAX57036.1| ATP synthase beta subunit [Bischofia javanica]
          Length = 479

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|62902849|gb|AAY19339.1| ATP synthase beta subunit [Anisophyllea fallax]
          Length = 483

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +E       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYGTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 420


>gi|33594186|ref|NP_881830.1| F0F1 ATP synthase subunit beta [Bordetella pertussis Tohama I]
 gi|81836194|sp|Q7VU44|ATPB_BORPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33564261|emb|CAE43553.1| ATP synthase beta chain [Bordetella pertussis Tohama I]
 gi|332383600|gb|AEE68447.1| F0F1 ATP synthase subunit beta [Bordetella pertussis CS]
          Length = 466

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   D
Sbjct: 52  LGDGVVRTIALGSSDGLRRGMQVAGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-ASD 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 EKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 231 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSR 348

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G          +AV +   I  FL 
Sbjct: 349 QLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILGMDELS-PEDKQAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|223667991|gb|ACN11591.1| F1-ATPase alpha subunit [Vanilla imperialis]
          Length = 418

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 92/401 (22%), Positives = 161/401 (40%), Gaps = 23/401 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG + +D 
Sbjct: 57  VPAGKAMLGRVVDALGVPIDGMGALSDHE-RRRVEVKAPGIIERQSVREPMQTGFKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVR 203
             P+  GQR  +      GK+ +      +                 +   +G++   V 
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILPEANAFSYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLEL 355

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 356 AQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 393


>gi|186886283|gb|ACC93544.1| ATPase F1 alpha subunit [Juncus stygius]
          Length = 358

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   VG++   V + ++     N    SV+V AT
Sbjct: 124 TAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANALDYSVLVAAT 183

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 184 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 243

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 244 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 303

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 304 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 355


>gi|4995790|emb|CAB44267.1| H(+)-transporting ATP synthase [Reevesia thyrsoidea]
          Length = 486

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 28/420 (6%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G  +  I  V        +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRXVQXIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|21633333|gb|AAM52141.1| ATP synthase beta subunit [Convolvulus mauritanicus]
          Length = 490

 Score =  282 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+++   +   +V ++  +  V    +   
Sbjct: 21  GRIIKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQANVTCEVQQLLGNNLVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLQRGMEVINTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-ANTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|294668638|ref|ZP_06733734.1| ATP synthase F1, beta subunit [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309400|gb|EFE50643.1| ATP synthase F1, beta subunit [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 463

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 181/413 (43%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +    F   +   +D   +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDAIPHV-FDALKLVENDLTLEVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D    +   + +  I  + P     
Sbjct: 60  GLKRGMAVNNTGAPITVPVGRETLGRIMDVLGNPVDEAGPVNASN-TRAIHQEAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|228942452|ref|ZP_04104989.1| ATP synthase subunit beta [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975384|ref|ZP_04135940.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982021|ref|ZP_04142314.1| ATP synthase subunit beta [Bacillus thuringiensis Bt407]
 gi|228777685|gb|EEM25959.1| ATP synthase subunit beta [Bacillus thuringiensis Bt407]
 gi|228784366|gb|EEM32389.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817194|gb|EEM63282.1| ATP synthase subunit beta [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326943103|gb|AEA18999.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 468

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  L 
Sbjct: 48  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGELP 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 346 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|183206666|gb|ACC54531.1| ATP synthase beta subunit [Campanula elatines]
          Length = 488

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|167615466|ref|ZP_02384101.1| type III secretion system ATPase [Burkholderia thailandensis Bt4]
          Length = 388

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 156/380 (41%), Positives = 221/380 (58%), Gaps = 5/380 (1%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+    ++  + P G   EI+ G  V    R   +       GRVI++ G+PIDG   
Sbjct: 10  AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 69

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +++  P  M+R+ V+    TG+R++D    L  GQR+G+FA +G+GKSTLL
Sbjct: 70  LDY-DALRPVIAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 128

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLT 237
            MFAR    D  +I+L+GERGREVREF+E     D + +SVVV ATSD S I R  A   
Sbjct: 129 GMFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 188

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAEYF  +G  VLL++DS+TRFA + REI   +GE P  RG+P SVF+ELPRLLER 
Sbjct: 189 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 248

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E  +G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A   +YP +D L S+
Sbjct: 249 GMGE--RGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 306

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +  + +       L  L+ +  E   +  +G Y+ G D   D+AV ++  I  FL
Sbjct: 307 SRIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 366

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q   + S  D       +L
Sbjct: 367 NQRTDEYSPPDATLAALHEL 386


>gi|156530159|gb|ABU75176.1| AtpB [Picrasma javanica]
          Length = 495

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|21633343|gb|AAM52146.1| ATP synthase beta subunit [Iseia luxurians]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V   S  +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPSGKMPYIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|21633337|gb|AAM52143.1| ATP synthase beta subunit [Aniseia martinicensis]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V   S  +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPSGKMPYIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S  G 
Sbjct: 140 LDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSXFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|21633431|gb|AAM52190.1| ATP synthase beta subunit [Erycibe hellwigii]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+++   +   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFTPGKMPNIYNALVVQGRDNEKANVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    +  G  S  I  + P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGKPVDNLGPVDTGTTS-PIHRRAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGPMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|268593514|ref|ZP_06127735.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131]
 gi|291310937|gb|EFE51390.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131]
          Length = 460

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GK    L    ++   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDDVPKVYDALEVVNGKEKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V +      +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLSRGLEVVNLEHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEE-RWSIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LANSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|194267381|gb|ACF35676.1| ATP synthase beta subunit [Brabejum stellatifolium]
          Length = 497

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|146337564|ref|YP_001202612.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. ORS278]
 gi|166201693|sp|A4YKE0|ATPB_BRASO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146190370|emb|CAL74366.1| ATP synthase subunit beta, membrane-bound, F1 sector
           [Bradyrhizobium sp. ORS278]
          Length = 480

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/417 (26%), Positives = 180/417 (43%), Gaps = 22/417 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQ-YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           Q G ++ +      V         L       G N   L     +    V    +   E 
Sbjct: 7   QIGRVTQVIGAVVDVQFEGHLPAILNSLETKNGGNRLVLEVAQHLGESTVRAIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   R+       GR+IN +G+PID    + K D    I  + P   ++ 
Sbjct: 67  LVRGQEVTDTGAPIRVPVGEGTLGRIINVIGEPIDEAGPV-KADNVRAIHQEAPTYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYLGDN------------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           ER RE  +   +++                 K  +V    +E P  R    LT +TIAE 
Sbjct: 186 ERTREGNDLYHEFIESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAED 245

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 246 FRDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTK 303

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V ++ V  D+  DP   +  + LD    L+RS+AE+G YP VDPL S SR+    
Sbjct: 304 GSITSVQAIYVPADDLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPL 363

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +   +  ++ R++  +DI  I G     +      V +   +  F+ Q 
Sbjct: 364 VVGEEHYAVARQVQQVLQRYKALQDIIAILGMDELSEED-KLTVARARKVERFMSQP 419


>gi|146188928|emb|CAJ34343.1| atp synthase subunit beta [Soyauxia talbotii]
          Length = 481

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|32815669|gb|AAP88231.1| ATP synthase beta subunit [Celtis philippensis]
          Length = 457

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +  +     F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLIVARARKIERFLSQP 408


>gi|6017822|gb|AAF01645.1| ATP synthase beta subunit [Phytolacca americana]
          Length = 494

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGGPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +    LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFGHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|62902815|gb|AAY19322.1| ATP synthase beta subunit [Lepuropetalon spathulatum]
          Length = 488

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLTRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|320454976|dbj|BAJ65631.1| ATP synthase beta subunit [Metzgeria americana]
          Length = 492

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 186/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S ++    G I+ I      +     +   + + +V +G+NS   GQ I +  ++     
Sbjct: 11  SISVTTNVGNITQIIGPVLDIAFSPGKMPSIYNCLVVRGQNSA--GQEINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +     V   G    +       GR+ N LG+P+D    +  G  +
Sbjct: 69  NNKVRAVAMSATDGLMREMEVVDTGAPLSVPVGEATLGRIFNVLGEPVDDLGPVNAG-TT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|297539943|ref|YP_003675712.1| ATP synthase F1 subunit beta [Methylotenera sp. 301]
 gi|297259290|gb|ADI31135.1| ATP synthase F1, beta subunit [Methylotenera sp. 301]
          Length = 479

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/424 (26%), Positives = 187/424 (44%), Gaps = 23/424 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLG----QVIR-INLDI 69
           + N+ V+ G +  I      V     Q   + + ++    +S+       +V + +   I
Sbjct: 3   TANVSVKIGKVVQIIGAVVDVEFPRDQMPKVFEALIIDDASSNAEAGLTLEVQQQLGDGI 62

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +G  + ++ G      G +  +       GR+++ LG+PID    +   D    I
Sbjct: 63  VRTIAMGSSDGLARGTSFKSTGDQITVPVGVGTLGRIMDVLGRPIDEAGPID-CDERRAI 121

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     +    
Sbjct: 122 HQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELINNIAKQ 181

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +F  +               K  +V    +E P  R    L+
Sbjct: 182 HSGLSVFAGVGERTREGNDFYHEMAEAGVIKLDDMKESKVAMVFGQMNEPPGNRLRVALS 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI
Sbjct: 242 GLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQERI 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S 
Sbjct: 302 --TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDST 359

Query: 358 SRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR  D     +E   +  S+   + R++E RDI  I G           AV +   I  F
Sbjct: 360 SRQLDPLVVGEEHYNVARSVQQTLQRYKELRDIIAILGMDELS-PEDKLAVGRARKIQRF 418

Query: 417 LKQS 420
           L Q 
Sbjct: 419 LSQP 422


>gi|157689154|gb|ABV65133.1| ATP synthase CF1 beta subunit [Ficus sp. Moore 315]
          Length = 498

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSSTDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLIVARARKIERFLSQP 434


>gi|155029353|dbj|BAF75560.1| ATP synthase beta subunit [Ophellantha spinosa]
          Length = 489

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21633433|gb|AAM52191.1| ATP synthase beta subunit [Erycibe glomerata]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+++   +   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEKANVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGKPVDNLGPVD-TNTTSPIHRPAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62184070|gb|AAX73346.1| ATP synthase beta subunit [Banksia bipinnatifida]
 gi|62184072|gb|AAX73347.1| ATP synthase beta subunit [Banksia falcata]
          Length = 493

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|330880573|gb|EGH14722.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 607

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 148/399 (37%), Positives = 220/399 (55%), Gaps = 15/399 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DN 58
           K L + A+     ++ +V   G +  +  +      L     +G   V    +S    + 
Sbjct: 10  KRLGSYAESISLPAQPVV--EGRLLRMVGLTLEAEGL--RAAMGSRCVVINDDSHHPVEV 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDG 115
             +V+  +   V++ PVG    I+ G  V      GR          GRV++  G+P+DG
Sbjct: 66  EAEVMGFSGGKVFLMPVGSVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDG 123

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              + K +  + +       + R  + +    GIR I+    +  GQR+G+FAG+G+GKS
Sbjct: 124 RSPI-KAEDWVPMDGPTINPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKS 182

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMA 234
            LL M  R    D +++ L+GERGREV+EFI      + LK+SVVV + +D++P++R  A
Sbjct: 183 VLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRA 242

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            +    IAEYF  KG NVLL++DS+TRFA + REIA   GE P  +GYP SVF+ LP+L+
Sbjct: 243 AMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLV 302

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G +E   G+ITA  +VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  
Sbjct: 303 ERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIE 362

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           AS+SR+     S +          L  R+++TRD+  +G
Sbjct: 363 ASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVG 401


>gi|317494643|ref|ZP_07953055.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917245|gb|EFV38592.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 459

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 11/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  +      V      V  + + +  +G     L    ++   +V    +G  +
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVKGGAKLVLEVQQQLGGGVVRCIAMGTSD 60

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G D+V       +       GR++N LG+PID    +G+ D    I  + P     
Sbjct: 61  GLRRGLDVVDLEHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEED-RWAIHREAPSYEEL 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 SNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 180 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 240 FIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 298 VPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RGVQSILQRYQELKDIIAILGMDELSEDD-KLVVARARKIQRFLSQP 403


>gi|312285185|gb|ADQ64334.1| ATP synthase beta subunit [Anisocycla linearis]
          Length = 461

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|253690617|ref|YP_003019807.1| ATP synthase F1, beta subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585447|sp|C6DJH2|ATPB_PECCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|251757195|gb|ACT15271.1| ATP synthase F1, beta subunit [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 460

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 187/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   IV    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLNVNNLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|228017689|gb|ACP52501.1| ATP synthase CF1 alpha subunit [Pinus pinaster]
          Length = 507

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 98/424 (23%), Positives = 170/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +P           
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALAQPX-XXXXXXXXX 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 126 XXXXXXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|157689148|gb|ABV65130.1| ATP synthase CF1 beta subunit [Berberidopsis corallina]
          Length = 498

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6686963|emb|CAB64786.1| ATP synthase beta subunit [Barleria prionitis]
          Length = 498

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3850938|gb|AAC72161.1| ATP synthase beta subunit [Knightia excelsa]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850910|gb|AAC72147.1| ATP synthase beta subunit [Eidothea zoexylocarya]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|323702636|ref|ZP_08114298.1| ATP synthase F1, beta subunit [Desulfotomaculum nigrificans DSM
           574]
 gi|323532455|gb|EGB22332.1| ATP synthase F1, beta subunit [Desulfotomaculum nigrificans DSM
           574]
          Length = 472

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 104/363 (28%), Positives = 177/363 (48%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G+   +       GR++N LG+ IDG + + K D
Sbjct: 54  LGNNRVRCVAMSSTEGLKRGMKVVDTGKPISVPVGRPVLGRLLNVLGEVIDGKEPV-KAD 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  +++    +  +TGI+VID+  P   G +IG+F G+G+GK+ ++     
Sbjct: 113 KYYPIHRPAPALIDQSTKAEVLETGIKVIDLMIPFLKGGKIGLFGGAGVGKTVIVMELIN 172

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +   +     +  K+++V    +E P  R    LT +
Sbjct: 173 NIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLDKTIMVFGQMNEPPGARLRVGLTGL 232

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   + LL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 233 TMAEYFRDEEGADTLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 291

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG++T+V ++ V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S S
Sbjct: 292 -TSTRKGSVTSVQAIYVPADDLTDPAPANAFAHLDATVVLSRQIAELGIYPAVDPLDSTS 350

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  +    +  ++ R++E +DI  I G     D      V +   +  FL
Sbjct: 351 RILDPQIVGKEHYECARGVQAVLQRYKELQDIIAILGMDELSDED-KLIVARARKLQRFL 409

Query: 418 KQS 420
            Q 
Sbjct: 410 SQP 412


>gi|229002314|dbj|BAH57920.1| ATP synthase beta subunit [Potamogeton compressus]
 gi|229002322|dbj|BAH57924.1| ATP synthase beta subunit [Potamogeton obtusifolius]
 gi|229002324|dbj|BAH57925.1| ATP synthase beta subunit [Potamogeton octandrus]
          Length = 491

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +G+ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGNMPNIYNALVV---KGRDTVGEQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLRRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPWIVGEEHYEIAQKVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|169794080|ref|YP_001718444.1| ATP synthase CF1 beta subunit [Manihot esculenta]
 gi|190358679|sp|B1NWF7|ATPB_MANES RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|157695892|gb|ABV66161.1| ATP synthase CF1 beta subunit [Manihot esculenta]
          Length = 500

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 23  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 80

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 81  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 140 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 199

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 200 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 259

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 260 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 317

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 318 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 377

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 436


>gi|157689168|gb|ABV65140.1| ATP synthase CF1 beta subunit [Staphylea colchica]
          Length = 498

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|62184076|gb|AAX73349.1| ATP synthase beta subunit [Austromuellera trinervia]
          Length = 496

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|33598626|ref|NP_886269.1| F0F1 ATP synthase subunit beta [Bordetella parapertussis 12822]
 gi|33603577|ref|NP_891137.1| F0F1 ATP synthase subunit beta [Bordetella bronchiseptica RB50]
 gi|81579009|sp|Q7W3B0|ATPB_BORPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81836821|sp|Q7WEM9|ATPB_BORBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33574755|emb|CAE39414.1| ATP synthase beta chain [Bordetella parapertussis]
 gi|33577702|emb|CAE34967.1| ATP synthase beta chain [Bordetella bronchiseptica RB50]
          Length = 466

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   D
Sbjct: 52  LGDGVVRTIALGSSDGLRRGMQVAGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-ASD 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 EKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 231 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSR 348

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G          +AV +   I  FL 
Sbjct: 349 QLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILGMDELS-PEDKQAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|1304067|dbj|BAA12667.1| proton ATPase beta subunit [Desulfovibrio vulgaris]
 gi|5811568|dbj|BAA83613.1| F1F0-ATPase beta subunit [Desulfovibrio vulgaris]
          Length = 471

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/415 (27%), Positives = 192/415 (46%), Gaps = 17/415 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSD---NLGQV-IRINLDIVYI 72
           +    G I  +      V   S  +   L    +    NSD    + +V   +  ++V  
Sbjct: 1   MSANIGKIVQVIGAVVDVEFPSGNLPNILSALDIKNPNNSDAPQLVCEVAQHLGDNVVRT 60

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G      G+   +       GR++N +G+P+D    + K D  + I   
Sbjct: 61  IAMDATEGLVRGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPI-KTDKYLPIHRP 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P    +    +  +TGI+V+D+  PL  G ++G+F G+G+GK+ +L     +       
Sbjct: 120 APEFTEQNTKVELLETGIKVVDLLIPLGKGGKMGLFGGAGVGKTVILMEMINNIAKQHGA 179

Query: 191 --IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  +   +     + +K+ ++    +E P  R    LTA+  AEYF  
Sbjct: 180 ISVFAGVGERTREGNDLYHEMKDAGVLEKAALIYGQMNEPPGARARVALTALACAEYFRD 239

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+
Sbjct: 240 IENQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERI--TSTVKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++  ++ ++++ +DI  I G     D      V +   I  FL Q 
Sbjct: 358 GPEHYSVARAVQQVLQKYKDLQDIIAILGMDELSDED-KLTVARARRIQRFLSQP 411


>gi|121999208|ref|YP_001003995.1| F0F1 ATP synthase subunit beta [Halorhodospira halophila SL1]
 gi|166201711|sp|A1WZT1|ATPB_HALHL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|121590613|gb|ABM63193.1| ATP synthase F1 subcomplex beta subunit [Halorhodospira halophila
           SL1]
          Length = 458

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  +      V      V  + D +V   +      Q  ++   +V    +G  +
Sbjct: 1   MSAGKIVQVIGAVVDVEFPRDQVPQIYDALVVDERGLTLEVQ-QQLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++  + V + G    +       GR+++ LG+P+D    + K D    I    P    +
Sbjct: 60  GLTRSEKVSNTGNPISVPVGQGTLGRIMDVLGEPVDEAGEV-KTDERWSIHRNAPSYEEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 SGGQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  +G +VL+
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLM 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  + +E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V 
Sbjct: 239 FIDNIYRYTLAGQEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  IVL+R +AE G YP VDPL S SR  D      +   + 
Sbjct: 297 VPADDLTDPAPATTFAHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGQEHYDVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQGVLQRYKELKDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 402


>gi|253998471|ref|YP_003050534.1| FliI/YscN family ATPase [Methylovorus sp. SIP3-4]
 gi|313200546|ref|YP_004039204.1| FliI/YscN family ATPase [Methylovorus sp. MP688]
 gi|253985150|gb|ACT50007.1| ATPase, FliI/YscN family [Methylovorus sp. SIP3-4]
 gi|312439862|gb|ADQ83968.1| ATPase, FliI/YscN family [Methylovorus sp. MP688]
          Length = 468

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 157/436 (36%), Positives = 231/436 (52%), Gaps = 27/436 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ +T +      +   + +G   V    +      +V+  + D + + P    E I 
Sbjct: 32  GRITKLTGLVMEAVGI--KLPIGSACVVPLAEGRRVEAEVVGFDGDKLLLMPQSGVEGIV 89

Query: 83  LGDLVF------------HWGRFR---------ISPSACWCGRVINALGKPIDGDDSLGK 121
            G  VF            H    R         +       GRV++  G+P+D    L  
Sbjct: 90  PGAKVFAMDVSDALPKPSHSNPPRRRTSDRARHLPVGDGLLGRVVDGAGRPLDDLGPLLT 149

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            + S+ + ++    + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 150 QN-SVPLNTRPLNPLMRAPITDVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVLLGMM 208

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D +++ L+GERGREV+EFIE  LG D L +SVVV A +D   ++R      A  
Sbjct: 209 ARYTTADVIVVGLIGERGREVKEFIEQILGTDGLARSVVVAAPADVPALMRLQGASYATA 268

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE+F ++G NVLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G  
Sbjct: 269 IAEFFRNQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNG 328

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP +D   S+SR 
Sbjct: 329 RPGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAIDIEQSISRA 388

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  + +KL   L  L  R+  + D+  +G Y  G D +LD+A+ +   I  FL+Q 
Sbjct: 389 MHNITLPEHQKLSRRLKQLNSRYTRSADLINVGAYEAGSDPVLDEAIAKHTKIEAFLQQD 448

Query: 421 PSDLS-SEDVFQEITK 435
            ++ S  E    E+  
Sbjct: 449 IAERSDVEHSIAELAA 464


>gi|253568448|ref|ZP_04845859.1| ATP synthase subunit alpha [Bacteroides sp. 1_1_6]
 gi|298385493|ref|ZP_06995051.1| ATP synthase F1, alpha subunit [Bacteroides sp. 1_1_14]
 gi|251842521|gb|EES70601.1| ATP synthase subunit alpha [Bacteroides sp. 1_1_6]
 gi|298261634|gb|EFI04500.1| ATP synthase F1, alpha subunit [Bacteroides sp. 1_1_14]
          Length = 527

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 97/446 (21%), Positives = 171/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINTNVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDRIKEGFIVKRTKRIASIRVGESMLGRVIDPLGEPLDGKGLIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+++      
Sbjct: 128 YEMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRNNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGAMDYTIVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R     KE                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIIKEEEVAREMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGVRPAINVGISVSRVGGNAQIKAMKKVAGTLKMDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITAMTIDKGRKNAQLLIQPQ 450


>gi|229002374|dbj|BAH57911.1| ATP synthase beta subunit [Potamogeton fryeri]
 gi|229002376|dbj|BAH57912.1| ATP synthase beta subunit [Potamogeton natans]
 gi|229002382|dbj|BAH57917.1| ATP synthase beta subunit [Potamogeton praelongus]
          Length = 491

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +G+ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGNMPNIYNALVV---KGRDTVGEQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLRRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPWIVGEEHYEIAQKVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|229002316|dbj|BAH57921.1| ATP synthase beta subunit [Potamogeton oxyphyllus]
 gi|229002318|dbj|BAH57922.1| ATP synthase beta subunit [Potamogeton pusillus]
 gi|229002320|dbj|BAH57923.1| ATP synthase beta subunit [Potamogeton pusillus]
 gi|229002326|dbj|BAH57926.1| ATP synthase beta subunit [Potamogeton cristatus]
          Length = 491

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +G+ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGNMPNIYNALVV---KGRDTVGEQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLRRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPWIVGEEHYEIAQKVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|65332610|gb|AAY42229.1| ATP synthase beta subunit [Anisophyllea polyneura]
          Length = 479

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 32  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+B+  P   G ++
Sbjct: 92  IFNVLGEPIDNLGPV-BTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVBLLAPYRRGGKV 150

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 151 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 211 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 271 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 329 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 388

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 389 ILGLDELSEED-RLIVARARKIERFLSQP 416


>gi|7706846|emb|CAB90056.1| ATP synthase beta subunit [Adinandra dumosa]
          Length = 483

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFXPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRXVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|62085159|gb|AAX62984.1| ATP synthase beta subunit [Lunania sp. Alford 69]
          Length = 486

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|57868934|gb|AAW57463.1| ATP synthase beta subunit [Fouquieria fasciculata]
          Length = 494

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVSDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|29346128|ref|NP_809631.1| F0F1 ATP synthase subunit alpha [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|81587109|sp|Q8A9U7|ATPA_BACTN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|29338022|gb|AAO75825.1| ATP synthase alpha chain [Bacteroides thetaiotaomicron VPI-5482]
          Length = 527

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 97/446 (21%), Positives = 171/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINTNVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDRIKEGFIVKRTKRIASIRVGESMLGRVIDPLGEPLDGKGLIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+++      
Sbjct: 128 YEMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRNNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGAMDYTIVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R     KE                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIIKEEEVAREMNDLPESLKGIVKVGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGVRPAINVGISVSRVGGNAQIKAMKKVAGTLKMDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITAMTIDKGRKNAQLLIQPQ 450


>gi|157163214|ref|YP_001460532.1| F0F1 ATP synthase subunit beta [Escherichia coli HS]
 gi|166990368|sp|A8A6J5|ATPB_ECOHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157068894|gb|ABV08149.1| ATP synthase F1, beta subunit [Escherichia coli HS]
          Length = 460

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  +   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGSERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|303252037|ref|ZP_07338207.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248695|ref|ZP_07530708.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|302649101|gb|EFL79287.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306854622|gb|EFM86812.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 457

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGLVRCIALGTSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V + G   ++       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRSLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGE-EARWNIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|229002370|dbj|BAH57909.1| ATP synthase beta subunit [Potamogeton alpinus]
 gi|229002372|dbj|BAH57910.1| ATP synthase beta subunit [Potamogeton distinctus]
 gi|229002380|dbj|BAH57916.1| ATP synthase beta subunit [Potamogeton perfoliatus]
 gi|229002386|dbj|BAH57915.1| ATP synthase beta subunit [Potamogeton malaianus]
          Length = 491

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +G+ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGNMPNIYNALVV---KGRDTVGEQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLRRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPWIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|261364179|ref|ZP_05977062.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996]
 gi|288567786|gb|EFC89346.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996]
          Length = 465

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 182/413 (44%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           +  G I  I      V      +      +    N   L +V ++  D +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDAIPHVYDALKLDANGLTL-EVQQLLGDGVVRTIAMGSSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG P+D   S+   D    I    P     
Sbjct: 60  GLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGSID-TDKHRAIHQTAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SATTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 239 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 357 EHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVMRARKIQRFLSQP 408


>gi|223667962|gb|ACN11580.1| F1-ATPase alpha subunit [Cyrtosia lindleyana]
          Length = 407

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 154/381 (40%), Gaps = 19/381 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 6   SGVKGIALNLENENVGIVVFGSDTAIQEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 66  GRGALSDHE-RRRVEVKAPGIIERQSVREPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 124

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           + +      +                 +   +G++   V + ++     N    S++V A
Sbjct: 125 TAIAIDTILNQKQMNSRGTSESDTLYCVYVAIGQKRSTVAQLVQILPEANAFSYSILVAA 184

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 185 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALMIYDDLSKQAVAYRQMSLLLRRPPGREAF 244

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I DG I    
Sbjct: 245 PGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSET 304

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 305 ELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLD 361

Query: 401 LILDKAVHQVPIIYDFLKQSP 421
                  ++   + +  KQ  
Sbjct: 362 AATQALPNRGARLTEVPKQPQ 382


>gi|186886289|gb|ACC93547.1| ATPase F1 alpha subunit [Juncus ensifolius]
          Length = 362

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 90/361 (24%), Positives = 157/361 (43%), Gaps = 18/361 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 6   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG+ +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 66  GKGALGEHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 124

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   VG++   V + ++     N    SV+V AT
Sbjct: 125 TAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANALDYSVLVAAT 184

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 185 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 244

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 245 GDVFYLHSRLLERASKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 304

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   ++ 
Sbjct: 305 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLEA 361

Query: 402 I 402
            
Sbjct: 362 A 362


>gi|5758870|gb|AAD50844.1| ATP synthase beta subunit [Cyanastrum cordifolium]
          Length = 496

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  LSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 IFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|289065096|ref|YP_003433982.1| ATP synthase CF1 beta subunit [Typha latifolia]
 gi|69214422|gb|AAZ03791.1| ATP synthase beta chain [Typha latifolia]
 gi|218175481|gb|ACK75682.1| ATP synthase beta subunit [Typha domingensis]
 gi|281371779|gb|ADA63706.1| ATP synthase CF1 beta subunit [Typha latifolia]
          Length = 498

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDAVFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085204|gb|AAX63006.1| ATP synthase beta subunit [Trigonostemon verrucosus]
          Length = 482

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYIEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|332674186|gb|AEE71003.1| flagellar protein export ATPase FliI [Helicobacter pylori 83]
          Length = 434

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECMGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLHARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|261346707|ref|ZP_05974351.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541]
 gi|282565107|gb|EFB70642.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541]
          Length = 460

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 183/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GK    L    ++   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDSVPKVYDALEVINGKEKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V +      +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLSRGLEVVNLEHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEE-RWSIHRSAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LANSTELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|183206672|gb|ACC54534.1| ATP synthase beta subunit [Campanula lusitanica]
          Length = 484

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 9   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|14718210|gb|AAK72843.1| ATP synthase beta subunit [Saxifraga mertensiana]
          Length = 483

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLKRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK  L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKXVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|3850984|gb|AAC72184.1| ATP synthase beta subunit [Opisthiolepis heterophylla]
 gi|3850986|gb|AAC72185.1| ATP synthase beta subunit [Buckinghamia celsissima]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850978|gb|AAC72181.1| ATP synthase beta subunit [Embothrium coccineum]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNITESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|237736350|ref|ZP_04566831.1| ATP synthase subunit beta [Fusobacterium mortiferum ATCC 9817]
 gi|229421392|gb|EEO36439.1| ATP synthase subunit beta [Fusobacterium mortiferum ATCC 9817]
          Length = 466

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/405 (27%), Positives = 189/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEIS 82
           G I+ I S    V    +   + + +  +  + + + +V +   + V     +   + + 
Sbjct: 5   GTITQIISAVVDVAFKDKLPNIYNALKVKVDDKELVLEVQQHLGNNVIRAVAMDSTDGLQ 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR++N LG+P+D +  + + D  + I    P    ++  
Sbjct: 65  RGMEVIDTGAPIKVPVGKAVLGRILNVLGQPVDDNGPV-ETDEYLPIHRDAPSFEEQETE 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 124 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGER 183

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+  ++     +  K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 184 TREGRDLYDEMTESGVLSKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFI 243

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 244 DNIFRFTQAGSEVSALLGRMPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVP 301

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSS 375
            D+  DP   +  S LD   VL+R +A  G YP VDPL S S+         +   +   
Sbjct: 302 ADDLTDPAPATTFSHLDATTVLSRQIASLGIYPAVDPLDSTSKALSADIVGTEHYNVARE 361

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 362 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIQRFFSQP 405


>gi|170747037|ref|YP_001753297.1| F0F1 ATP synthase subunit beta [Methylobacterium radiotolerans JCM
           2831]
 gi|170653559|gb|ACB22614.1| ATP synthase F1, beta subunit [Methylobacterium radiotolerans JCM
           2831]
          Length = 484

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +  +   +  + +V  ++  + V    +   E ++
Sbjct: 15  GKITQVIGPVVDVQFEGHLPEILNALETKNNGARLVLEVAQQLGENTVRCIAMDTSEGLT 74

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G   ++       GR++N +G+PID    + +      I    P    +   
Sbjct: 75  RGQECTDTGEPIKVPVGMNTLGRIMNVIGEPIDEAGPV-QATTYRAIHQPAPSYAEQSTE 133

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 134 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 193

Query: 199 GREVREFIEDYLG------------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            RE  +   + +                 K  +V    +ESP  R    LT +TIAE F 
Sbjct: 194 TREGNDLYHEMIESKVNVDPKEHGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEQFR 253

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+
Sbjct: 254 DDGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGS 311

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+   A  
Sbjct: 312 ITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAIL 371

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   +   +   + R++  +DI  I G     +      V +   I  F  Q     S
Sbjct: 372 GEEHYDVARRVQQTLQRYKALQDIIAILGMDELSEED-KLTVARARKIERFFSQP---FS 427

Query: 426 SEDVFQ 431
             +VF 
Sbjct: 428 VAEVFT 433


>gi|118917398|dbj|BAF40505.1| ATP synthase beta subunit [Aporusa papuana]
          Length = 489

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708167|emb|CAB90026.1| ATP synthase beta subunit [Bersama lucens]
          Length = 485

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|62085186|gb|AAX62997.1| ATP synthase beta subunit [Pogonophora schomburgkiana]
          Length = 482

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 35  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGTPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 95  IFNVLGEPVDDLGPVD-TRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 153

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 154 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEENIA 213

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 214 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 274 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 332 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 391

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 392 ILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|51596036|ref|YP_070227.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           32953]
 gi|51589318|emb|CAH20939.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           32953]
          Length = 466

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 160/462 (34%), Positives = 242/462 (52%), Gaps = 28/462 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 5   LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 62

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF---------------RIS 96
            +   +V+  N   +++ P+   E I  G  V+      G                 ++ 
Sbjct: 63  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSIPSKQSFASKQLP 122

Query: 97  PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156
                 GRV++   KP+DG  +  +      +++     + R  + +    G+R I+   
Sbjct: 123 LGPELLGRVLDGSAKPLDGLPA-PETGYRAPLITPPINPLQRTAIVQVLDVGVRTINALL 181

Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215
            +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   
Sbjct: 182 TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRA 241

Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275
           +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE
Sbjct: 242 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 301

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
            P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH
Sbjct: 302 PPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 361

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           +VL+R LAE G YP +D  AS+SR        D    V     L+  ++  RD+  +G Y
Sbjct: 362 VVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLVSVGAY 421

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 422 AAGSDPLLDKAIALYPQMEAFLQQGMFERSSFDDACQHLKGL 463


>gi|325127451|gb|EGC50381.1| ATP synthase F1, alpha subunit [Neisseria meningitidis N1568]
          Length = 464

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 21/384 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +  G  + +  D V    +G  E I  GD V   GR   +       GRV++ALG+PID
Sbjct: 6   GNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRELVGRVVDALGRPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +    L+  I    P  + R+ V++  +TG++ ID   P+  GQR  +      GK
Sbjct: 66  GKGPINTT-LTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVGRGQRELIIGDRQTGK 124

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  +       I   +G++   +   +         + ++VV AT+ E+  L+
Sbjct: 125 TAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAMEHTIVVAATASEAAALQ 184

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ E+F  +G++ L++ D +++ A + R+I+      P    YP  VF    
Sbjct: 185 YIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHS 244

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     + +             G++TA+  +     + +  +  +V SI DG I L
Sbjct: 245 RLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 304

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 305 ETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGGIRLALAQYRE---LAAFSQFASD 361

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +    ++ + +KQ   
Sbjct: 362 LDEATRKQLEHGEVVTELMKQKQF 385


>gi|262173385|ref|ZP_06041062.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
 gi|261890743|gb|EEY36730.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451]
          Length = 449

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 144/427 (33%), Positives = 233/427 (54%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  +    G +  +  +      +     L    + +    D +  QV+  +  + Y+ P
Sbjct: 23  SIPVARVTGRLVKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVVGFDHTVAYLMP 80

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V    G   +  S  W GRV+N LG+ +D    L +G+  + + SK  
Sbjct: 81  IRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPVLKEGE-RVSLESKPI 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M  ++   D +++ 
Sbjct: 140 NPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVLMGMITQNTDADVIVVG 199

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +GERGREVREFI         KK++++ A +DESP++R  A L    + EYF  KG +V
Sbjct: 200 FIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATLLCHRVGEYFRDKGQDV 259

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA   GE P +RGYP SVFS LP+LLER G SE + G++TA+ +
Sbjct: 260 LLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLERAGNSENQDGSLTAIYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DP+ DS R+ILDG++VL+R LAE+G YP +D  AS+SR             
Sbjct: 320 VLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINASLSRCMMSCTQPTHSDT 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQ 431
            +        + + +++  +GGY+PG D  LD+++   P +  +L+Q+ +++        
Sbjct: 380 ANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAYLQQAANEVVDYSTSLA 439

Query: 432 EITKKLQ 438
           ++ +  Q
Sbjct: 440 DLAQIFQ 446


>gi|183206670|gb|ACC54533.1| ATP synthase beta subunit [Heterochaenia ensifolia]
          Length = 483

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+N   LG+ I +  ++        V    
Sbjct: 16  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKGRN--TLGEPINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVVDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TPTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|254473200|ref|ZP_05086598.1| flagellar-specific H(+)-transporting ATP synthase [Pseudovibrio sp.
           JE062]
 gi|211957921|gb|EEA93123.1| flagellar-specific H(+)-transporting ATP synthase [Pseudovibrio sp.
           JE062]
          Length = 373

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 156/369 (42%), Positives = 233/369 (63%), Gaps = 3/369 (0%)

Query: 73  CPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P G  + +  G       R  I  PS+ W GRV+NALG+PIDG   L  G +  ++   
Sbjct: 1   MPFGELDGVRHGSKAKLISRESIVHPSSGWLGRVVNALGEPIDGKGPLPFGSIPRKLRDS 60

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            PPA  R RV      G+R ++ F   C GQR+G+FAGSG+GKS L+SM AR+   +  +
Sbjct: 61  PPPAAERARVGGPIDLGVRSLNSFVTCCQGQRLGIFAGSGVGKSVLMSMLARNAETEVSV 120

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I L+GERGREV+EFI +D   + L KSVVVVATSDES ++R+ A    +T++EYF  +G 
Sbjct: 121 IGLIGERGREVQEFIEDDLGEEGLAKSVVVVATSDESVLMRREAAYLTLTLSEYFRDEGK 180

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVL ++DS+TRFA + REI  + GE P ++GY  +VF+ELP+LLER GP    KG++TA+
Sbjct: 181 NVLCMMDSVTRFAMAQREIGLSVGEPPTSKGYTPTVFTELPKLLERAGPGAVGKGSVTAL 240

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLV+GDNHN+P+AD+VR ILDGHIV+ R +AE GRYP ++ L SVSR   +    +  
Sbjct: 241 FTVLVEGDNHNEPVADAVRGILDGHIVMERQIAERGRYPAINVLKSVSRTMPRCVPEEAL 300

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDV 429
            ++     L+  + +  ++  +G Y+ G D ++D+A+ +   +  +L Q   + ++ E+ 
Sbjct: 301 PILRRAKQLMSAYADMEELIRLGAYKEGADPLVDEAIAKYDALEAYLGQMKGEKTTIEEG 360

Query: 430 FQEITKKLQ 438
           + ++   L+
Sbjct: 361 YFQLAHLLE 369


>gi|155573943|dbj|BAF75538.1| ATP synthase beta subunit [Melanolepis multiglandulosa]
          Length = 489

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGTEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|37720993|gb|AAN32499.1| ATP synthase beta subunit [Iris missouriensis]
          Length = 497

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINLTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVY-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758916|gb|AAD50890.1| ATP synthase beta subunit [Strelitzia nicolai]
          Length = 496

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPIDNLGPVDTSTTS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5001565|gb|AAD37029.1|AF092103_1 ATP synthase beta subunit [Altingia excelsa]
          Length = 494

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVGFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|62184036|gb|AAX73329.1| ATP synthase beta subunit [Banksia media]
          Length = 485

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085118|gb|AAX62965.1| ATP synthase beta subunit [Croton alabamensis var. alabamensis]
          Length = 479

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|323715498|gb|ADY04817.1| ATP synthase beta subunit [Caiophora cirsiifolia]
          Length = 486

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|260770081|ref|ZP_05879014.1| ATP synthase alpha chain [Vibrio furnissii CIP 102972]
 gi|260615419|gb|EEX40605.1| ATP synthase alpha chain [Vibrio furnissii CIP 102972]
 gi|315182598|gb|ADT89511.1| ATP synthase F1, alpha subunit [Vibrio furnissii NCTC 11218]
          Length = 511

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 184/448 (41%), Gaps = 30/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L      N          G I S++    T+  LS  V  G+ +      
Sbjct: 1   MQLNSNEISELIRQRIVNFDLESEARNEGSIVSVSDGIITIHGLSD-VMQGEMLELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRFALALNLERHSVGAVVMGPYADLCEGMKVKGTGRILEVPVGNGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAV-TFDRMEPVEVIAPGVIDRKSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDC--FDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +      K I   +G++   +   +      N    +++VVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKSLGVKCIYVAIGQKASTIANVVRKLDEHNALDNTIIVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEAYVERATNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQTKVIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +D    + +     + + +KQ      S
Sbjct: 413 LDETTRRQLDHGEKVTELMKQKQYSPMS 440


>gi|195183546|dbj|BAG66984.1| ATP synthase beta subunit [Viola philippica]
          Length = 489

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMQVVDTGAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEANIGESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPKIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|139522589|gb|ABO77689.1| ATP synthase beta subunit [Siphocampylus affinis]
          Length = 498

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRXTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMEXINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|119368018|dbj|BAF40508.1| ATP synthase beta subunit [Breynia cernua]
          Length = 489

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|5001595|gb|AAD37044.1|AF092118_1 ATP synthase beta subunit [Daphniphyllum sp. SH1999]
          Length = 480

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVXXXTTS-PIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|57868948|gb|AAW57470.1| ATP synthase beta subunit [Empetrum hermaphroditum]
          Length = 493

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   S  +  + + ++ QG   D +GQ I +  ++        V    
Sbjct: 17  GRIVQIIGPVLDVAFPSGKMPNIYNALIVQG--RDTVGQPINVTCEVQQLVGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    L     S  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAALSVPVGGVTLGRIFNVLGEPVDNLGPLDTHTTS-PIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIELETKLLIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYKEMKETGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGTLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGDKHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 430


>gi|48478778|ref|YP_024386.1| ATP synthase CF1 beta subunit [Saccharum hybrid cultivar
           SP-80-3280]
 gi|50812535|ref|YP_054638.1| ATP synthase CF1 beta subunit [Saccharum officinarum]
 gi|75323362|sp|Q6ENV6|ATPB_SACOF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75324213|sp|Q6L392|ATPB_SACHY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|48478680|gb|AAT44700.1| ATP synthase CF1 beta chain [Saccharum hybrid cultivar SP80-3280]
 gi|49659519|dbj|BAD27300.1| ATP synthase beta subunit [Saccharum hybrid cultivar NCo 310]
          Length = 498

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      +T    +   + + ++ + +++     +   +V ++  +  V    
Sbjct: 19  SVGRIDQIIGPVLDITFPPGKLPNIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|320454991|dbj|BAJ65641.1| ATP synthase beta subunit [Metzgeria decipiens]
 gi|320454997|dbj|BAJ65645.1| ATP synthase beta subunit [Metzgeria temperata]
          Length = 492

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 186/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S ++    G I+ I      +     +   + + +V +G+NS   GQ I +  ++     
Sbjct: 11  SISVTTNVGNITQIIGPVLDIAFSPGKMPSIYNSLVVRGQNSA--GQEINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +     V   G    +       GR+ N LG+P+D    +  G  +
Sbjct: 69  NNKVRAVAMSATDGLMREMEVVDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVNAG-TT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|305671627|gb|ADM63123.1| ATP synthase beta subunit [Kolkwitzia amabilis]
 gi|305671635|gb|ADM63127.1| ATP synthase beta subunit [Heptacodium miconioides]
          Length = 489

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPGIVGKKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|296137183|ref|YP_003644425.1| ATP synthase F1, beta subunit [Thiomonas intermedia K12]
 gi|295797305|gb|ADG32095.1| ATP synthase F1, beta subunit [Thiomonas intermedia K12]
          Length = 471

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-------VIRINLDIVYIC 73
            QG  +  I +V       +    + D +V    N+ +L +         +I   +V   
Sbjct: 6   AQGKIVQCIGAVIDIEFPRNAIPKVYDALVLADNNASSLAESGLTFEVQQQIGDGVVRTI 65

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +G  + +  G LV + G   ++       GR+++ LG+PID    +   D    I    
Sbjct: 66  AMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPI-ATDERRSIHQSA 124

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P   +        +TGI+VID+  P   G ++G+F G+G+GK+  +     +        
Sbjct: 125 PKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGL 184

Query: 191 -IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +
Sbjct: 185 SVFAGVGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMAERFRDE 244

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT
Sbjct: 245 GRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQERI--TSTKTGSIT 302

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 303 SIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGE 362

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      ++  ++ R++E RDI  I G           AV +   I  FL Q 
Sbjct: 363 EHYSTTRAVQGILQRYKELRDIIAILGMDELS-PEDKLAVARARKIQRFLSQP 414


>gi|229076520|ref|ZP_04209480.1| ATP synthase subunit beta [Bacillus cereus Rock4-18]
 gi|229099738|ref|ZP_04230663.1| ATP synthase subunit beta [Bacillus cereus Rock3-29]
 gi|229118801|ref|ZP_04248150.1| ATP synthase subunit beta [Bacillus cereus Rock1-3]
 gi|228664602|gb|EEL20095.1| ATP synthase subunit beta [Bacillus cereus Rock1-3]
 gi|228683627|gb|EEL37580.1| ATP synthase subunit beta [Bacillus cereus Rock3-29]
 gi|228706553|gb|EEL58766.1| ATP synthase subunit beta [Bacillus cereus Rock4-18]
          Length = 469

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  L 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGELP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|183206572|gb|ACC54484.1| ATP synthase beta subunit [Leptocodon gracilis]
          Length = 460

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 26  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +  G  S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGEPIDNLGPVDSGTTS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNFA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYKELQDIIT 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLTVARARKIERFLSQP 410


>gi|118917362|dbj|BAF40469.1| ATP synthase beta subunit [Jatropha integerrima]
          Length = 486

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDDLGPVD-TRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINQENIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910884|gb|ABI48174.1| ATPase beta subunit [Hedwigia ciliata]
          Length = 472

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 184/416 (44%), Gaps = 25/416 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIG 78
           I+ I      VT    +   + + ++ +G+N+     +   +V ++  +  V    +   
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTADQEINVTCEVQQLLGNNKVRAVAMSAT 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P    
Sbjct: 61  DGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVD-ANTTFPIHRSAPAFTQ 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 120 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 179

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 180 VGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 239

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 240 DVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 298 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWI 357

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 VGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|15425586|emb|CAC60320.1| ATP synthase beta subunit [Moschopsis rosulata]
          Length = 478

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 75  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|16943658|emb|CAD10752.1| ATP synthase, beta subunit [Anemarrhena asphodeloides]
          Length = 493

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKLPNIYNALVVQG--RDIVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718244|gb|AAK72860.1| ATP synthase beta subunit [Terminalia catappa]
          Length = 481

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|3850942|gb|AAC72163.1| ATP synthase beta subunit [Neorites kevediana]
          Length = 490

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|330505856|ref|YP_004382725.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01]
 gi|328920142|gb|AEB60973.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01]
          Length = 458

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDQVPAVYEALKVVGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  +    +   +       GR+++ LG PID    +G+ +   EI    P    +
Sbjct: 60  GLKRGLDITRTNKAISVPVGKATLGRIMDVLGNPIDEAGPIGEEEQ-WEIHRAAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGTEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEAD-KQLVSRARKIQRFLSQP 402


>gi|163732295|ref|ZP_02139741.1| F0F1 ATP synthase subunit beta [Roseobacter litoralis Och 149]
 gi|161394593|gb|EDQ18916.1| F0F1 ATP synthase subunit beta [Roseobacter litoralis Och 149]
          Length = 474

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 187/422 (44%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V        + + +      +  + +V   +  + V    +  
Sbjct: 1   MANAVGKITQVIGAVVDVQFGDHLPEILNALETDNNGNRLVLEVAQHLGENTVRAIAMDA 60

Query: 78  GEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V    G   I       GR++N +G+PID    + + D    I  + P   
Sbjct: 61  TEGLVRGQTVTDTDGPISIPVGNATLGRIMNVVGEPIDEKGPV-ESDEKRSIHQEAPAFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 EQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +             K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMIESAVIVPDNLTESKVALVYGQMNEPPGARMRVALTGLTLAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + 
Sbjct: 240 RDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKA 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D  
Sbjct: 298 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPQ 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 358 VLGEEHYNVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|332285686|ref|YP_004417597.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
 gi|330429639|gb|AEC20973.1| ATP synthase beta chain [Pusillimonas sp. T7-7]
          Length = 473

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + +  G  V + G    +       GR+++ LG+PID    +   +
Sbjct: 52  LGDGIVRTIAMGSSDGLRRGMEVANSGAPISVPVGEGTLGRIMDVLGRPIDERGPIDSEE 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 VRA-IHQDAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 171 NIAKAHSGLSVFAGVGERTREGNDFYHEMAEAGVIKMDNLKESKVAMVFGQMNEPPGNRL 230

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              L+ +T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +
Sbjct: 231 RVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGK 290

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VD
Sbjct: 291 LQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVD 348

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      +   +   +   + R++E RDI  I G          +AV +  
Sbjct: 349 PLDSTSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILGMDELS-PEDKQAVARAR 407

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 408 KIQRFLSQP 416


>gi|312963998|ref|ZP_07778469.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6]
 gi|311282033|gb|EFQ60643.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6]
          Length = 458

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 60  GLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEE-RWGIHRPAPSFAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V++   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEAD-KQLVNRARKIQRFLSQP 402


>gi|294783123|ref|ZP_06748447.1| ATP synthase F1, beta subunit [Fusobacterium sp. 1_1_41FAA]
 gi|294480001|gb|EFG27778.1| ATP synthase F1, beta subunit [Fusobacterium sp. 1_1_41FAA]
          Length = 462

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 195/408 (47%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           +  G I+ I S    V    +   + + +  + ++ + + +V   +  ++V    +   +
Sbjct: 1   MNRGTITQIISAVVDVAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTD 60

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G+   +       GR++N LG+P+D    +   +  + I  + P   + 
Sbjct: 61  GLKRGMEVIDTGKPITVPVGKAVLGRILNVLGEPVDNQGPVN-AETVLPIHREAPEFDDL 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
           +   + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 120 ETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGV 179

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE R+   +      + K+ +V    +E P  R    LT +T+AE F  K   +VL
Sbjct: 180 GERTREGRDLYNEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKL 372
            V  D+  DP   +  S LD   VL+R++A  G YP VDPL S S+ L++     +  ++
Sbjct: 298 YVPADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGREHYEI 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 358 ARKVQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIERFFSQP 404


>gi|123442767|ref|YP_001006744.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089728|emb|CAL12581.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 443

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 161/449 (35%), Positives = 241/449 (53%), Gaps = 21/449 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNS 56
           M K  E ++Q         + + G ++  T +    T L   + LG   + +    G+  
Sbjct: 1   MDKFEERISQ------STTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDNGEVQ 52

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWG----RFRISPSACWCGRVINAL 109
           +   +V+  N   +++ P+   E I  G  V+     G      ++       GRV++  
Sbjct: 53  EVESEVVGFNGQRLFLMPLEEVEGIVPGARVYARITTGGASASKQLPLGPELLGRVLDGS 112

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
            KP+DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAG
Sbjct: 113 AKPLDGLPAPETG-YRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAG 171

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
           SG+GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP
Sbjct: 172 SGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSP 231

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF+
Sbjct: 232 LLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFA 291

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G Y
Sbjct: 292 KLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHY 351

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+ 
Sbjct: 352 PAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIA 411

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             P +  FL+Q   + SS +   +  K L
Sbjct: 412 LYPQMEIFLQQGMFERSSYEDACQHLKSL 440


>gi|62085180|gb|AAX62994.1| ATP synthase beta subunit [Pimelodendron zoanthogyne]
          Length = 482

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|53713467|ref|YP_099459.1| F0F1 ATP synthase subunit alpha [Bacteroides fragilis YCH46]
 gi|60681713|ref|YP_211857.1| F0F1 ATP synthase subunit alpha [Bacteroides fragilis NCTC 9343]
 gi|253565455|ref|ZP_04842910.1| ATP synthase subunit alpha [Bacteroides sp. 3_2_5]
 gi|265763734|ref|ZP_06092302.1| ATP synthase F1, alpha subunit [Bacteroides sp. 2_1_16]
 gi|81315222|sp|Q5LD82|ATPA_BACFN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|81608481|sp|Q64UA4|ATPA_BACFR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|52216332|dbj|BAD48925.1| ATP synthase alpha chain [Bacteroides fragilis YCH46]
 gi|60493147|emb|CAH07928.1| ATP synthase alpha chain [Bacteroides fragilis NCTC 9343]
 gi|251945734|gb|EES86141.1| ATP synthase subunit alpha [Bacteroides sp. 3_2_5]
 gi|263256342|gb|EEZ27688.1| ATP synthase F1, alpha subunit [Bacteroides sp. 2_1_16]
 gi|301163256|emb|CBW22806.1| ATP synthase alpha chain [Bacteroides fragilis 638R]
          Length = 527

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 97/446 (21%), Positives = 171/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L Q  E     + + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRQQLEGIETKVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G  V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDKIKEGFTVKRTKRIASIRVGESMLGRVIDPLGEPLDGKGLIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK      T++
Sbjct: 128 YEMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTSIAIDTII 187

Query: 179 SMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +  +  +  D    I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRSNYEAGDPVYCIYVAIGQKGSTVASIVNTLRQYGAMDYTIVVAATAGDPAALQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A S RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVSYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQEEVAREMNDLPESLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L+  L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLDTDLFNQGNRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +    + +       L Q  
Sbjct: 425 SGDMDPVTALTIDKGQKNARLLVQPQ 450


>gi|325275312|ref|ZP_08141265.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51]
 gi|324099560|gb|EGB97453.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51]
          Length = 458

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDVVPSVYNALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G D+V       +       GR+++ LG PID    +G+ +    I    P   ++
Sbjct: 60  GLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RRGIHQPAPSFADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSESD-KQLVARARKIQRFLSQP 402


>gi|305671693|gb|ADM63156.1| ATP synthase beta subunit [Symphoricarpos sp. Donoghue & Winkworth
           28]
          Length = 489

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPGIVGQNHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|194267341|gb|ACF35657.1| ATP synthase beta subunit [Orites diversifolia]
          Length = 497

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|124361636|gb|ABN09260.1| ATP synthase beta subunit [Diospyros confertiflora]
          Length = 465

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGGTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|61968211|gb|AAX57032.1| ATP synthase beta subunit [Aporusa frutescens]
 gi|61968217|gb|AAX57035.1| ATP synthase beta subunit [Baccaurea lanceolata]
 gi|61968267|gb|AAX57060.1| ATP synthase beta subunit [Maesobotrya vermeulenii]
          Length = 479

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|16943739|emb|CAD10753.1| ATP synthase, beta subunit [Paradisea liliastrum]
          Length = 448

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 5   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 65  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 124 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 183

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 184 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 244 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 302 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 361

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 362 ILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|16943763|emb|CAD10773.1| atp synthase, beta subunit [Lomandra ordii]
          Length = 498

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758913|gb|AAD50887.1| ATP synthase beta subunit [Maianthemum racemosum]
          Length = 495

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+ 
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMG 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRXVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|333024394|ref|ZP_08452458.1| putative F0F1 ATP synthase subunit alpha [Streptomyces sp. Tu6071]
 gi|332744246|gb|EGJ74687.1| putative F0F1 ATP synthase subunit alpha [Streptomyces sp. Tu6071]
          Length = 560

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 88/448 (19%), Positives = 173/448 (38%), Gaps = 25/448 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +++       +  L       + +  +      LG  +
Sbjct: 43  DALENFVQSYKPDAASREEVGTVTTAGDGIARIEGL-PSAMANELLKFEDG---TLGLAL 98

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    +  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 99  NLEEREIGAIVLGEFSGVEEGQPVTRTGEVLSVGVGDGYLGRVVDPLGNPIDGLGEIATS 158

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK      T+
Sbjct: 159 -GRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 217

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +             + + +V + + +    +
Sbjct: 218 INQRGNWESGDPKKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVASPASDPAGFK 277

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 278 YLAPYTGSAIGQHWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 337

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 338 RLLERCAKLSDDLGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 397

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D      + +
Sbjct: 398 ALNVGISVSRVGGSAQHKAMKQVSGRLRLDLAQYRELESFAAFG---SDLDAASKAQLGR 454

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITKK 436
              + + LKQ     +++ED    +   
Sbjct: 455 GQRLVELLKQDQYQPMATEDQVVSVWSA 482


>gi|217034565|ref|ZP_03439974.1| hypothetical protein HP9810_874g22 [Helicobacter pylori 98-10]
 gi|216942985|gb|EEC22468.1| hypothetical protein HP9810_874g22 [Helicobacter pylori 98-10]
          Length = 434

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISEPQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILK 434


>gi|195183544|dbj|BAG66983.1| ATP synthase beta subunit [Rinoreocarpus ulei]
 gi|195468859|dbj|BAG66952.1| ATP synthase beta subunit [Amphirrhox surinamensis]
          Length = 489

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119367990|dbj|BAF40477.1| ATP synthase beta subunit [Pimelodendron griffithianum]
          Length = 489

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75338776|sp|Q9XQX2|ATPB_TROAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5031147|gb|AAD38084.1|AF093423_1 ATP synthase beta subunit [Trochodendron aralioides]
 gi|157689170|gb|ABV65141.1| ATP synthase CF1 beta subunit [Trochodendron aralioides]
          Length = 498

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|183206582|gb|ACC54489.1| ATP synthase beta subunit [Feeria angustifolia]
          Length = 457

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 9   KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 68

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 69  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 127

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 128 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 187

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 188 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 247

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 248 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 305

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 306 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 365

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 366 ILGLDELSEED-RLTVARARKIERFLSQP 393


>gi|30351869|emb|CAD48087.1| ATP synthase beta subunit [Bowiea volubilis]
          Length = 498

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 24  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--HDTVGQQINVTCEVQQLLGNNRVRAVA 81

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 82  MSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVD-TRITSPIHRSAP 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 141 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 200

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 201 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 260

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 261 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 318

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 319 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 378

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 379 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 437


>gi|323715496|gb|ADY04816.1| ATP synthase beta subunit [Caiophora lateritia]
          Length = 487

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|237809867|ref|YP_002894307.1| F0F1 ATP synthase subunit beta [Tolumonas auensis DSM 9187]
 gi|259585455|sp|C4LDW0|ATPB_TOLAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|237502128|gb|ACQ94721.1| ATP synthase F1, beta subunit [Tolumonas auensis DSM 9187]
          Length = 462

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/410 (27%), Positives = 192/410 (46%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDF--VVHQGKNSDNLGQVIR-INLDIVYICPVG 76
           +  G I  +      V      V  + D   +V +G++   + +V + I   +V    +G
Sbjct: 1   MSNGIIVQVIGAVVDVQFPQDAVPKVYDALKIVSEGQSKGLVMEVQQQIGGGVVRCIAMG 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G   ++       GR++N LG+P+D    +G  D +  I  + P  
Sbjct: 61  TSDGLRRGAEVSNTGEAIKVPVGMKTLGRIMNVLGEPVDEQGPIGAED-NWVIHREAPSY 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 120 EDQSSATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 179

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 180 AGVGERTREGNDFYYEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 239

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ 
Sbjct: 240 VLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQ 297

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +  
Sbjct: 298 AVYVPADDLTDPSPATTFAHLDSTVTLSRQIAALGIYPAVDPLDSTSRQLDPLVVGQEHY 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ETARGVQTVLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 406


>gi|194267358|gb|ACF35665.1| ATP synthase beta subunit [Malagasia alticola]
          Length = 497

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|156530169|gb|ABU75181.1| AtpB [Quassia amara]
          Length = 471

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 23  KGRDIVGQPINMTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 82

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I +  P  +        F+TGI+V+D+  P   G +I
Sbjct: 83  IFNVLGEPVDNLGPVD-TRTTSPIHNPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 141

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 142 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 201

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 202 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 261

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 262 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 319

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 320 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 379

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 380 ILGLDELSEED-RLTVARARKIERFLSQP 407


>gi|111283722|gb|ABH09211.1| ATPase beta subunit [Paraschistochila tuloides]
          Length = 472

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V QG+NS   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVAFSPGKMPNIYNSLVVQGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMRGMEVIDTGAALSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRPAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|61968311|gb|AAX57082.1| ATP synthase beta subunit [Savia bahamensis]
          Length = 479

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPGTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|61968223|gb|AAX57038.1| ATP synthase beta subunit [Breynia cernua]
 gi|61968225|gb|AAX57039.1| ATP synthase beta subunit [Breynia stipitata]
 gi|61968243|gb|AAX57048.1| ATP synthase beta subunit [Glochidion puberum]
 gi|61968309|gb|AAX57081.1| ATP synthase beta subunit [Sauropus androgynus]
          Length = 479

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|37543468|gb|AAM08915.1| ATP synthase beta subunit [Cliftonia monophylla]
          Length = 464

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESRVINEENIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|7708315|emb|CAB90086.1| ATP synthase beta subunit [Globularia salicina]
          Length = 492

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 48  KXRDTVGQPINVXCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPXSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPIDNLGPVD-TRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|18075921|emb|CAD11922.1| ATP synthase beta subunit [Escallonia calcottiae]
 gi|18075923|emb|CAD11923.1| ATP synthase beta subunit [Escallonia illinita]
 gi|18075925|emb|CAD11924.1| ATP synthase beta subunit [Escallonia myrtoidea]
 gi|18075927|emb|CAD11925.1| ATP synthase beta subunit [Escallonia pulverulenta]
          Length = 490

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      V     +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 12  SGRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEQNIGESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|5758866|gb|AAD50840.1| ATP synthase beta subunit [Costus barbatus]
          Length = 496

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 28/420 (6%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G  +  I  V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRTVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|329939837|ref|ZP_08289138.1| ATP synthase subunit alpha [Streptomyces griseoaurantiacus M045]
 gi|329301407|gb|EGG45302.1| ATP synthase subunit alpha [Streptomyces griseoaurantiacus M045]
          Length = 554

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/447 (19%), Positives = 169/447 (37%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 38  DALENFVQSYQPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 93

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 94  NLEEREIGCVVLGEFSGIEEGQPVTRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 152

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 153 SGRRALELQAPGVMARKSVHEPMETGYKAVDAMTPVGRGQRQLIIGDRQTGKTALAVDTI 212

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + +   +G++G  +             + + +V A + +    +
Sbjct: 213 INQRDNWRSGDPKKQVRCVYVAIGQKGSTIASVRSALEESGALEYTTIVAAPASDPAGFK 272

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 273 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 332

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 333 RLLERCAKLSDDLGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 392

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D      + +
Sbjct: 393 ALNVGISVSRVGGSAQHKAMKQVSGRLRLDLAQYRELEAFAAFG---SDLDAASKSQLER 449

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ     + +ED    +  
Sbjct: 450 GQRLVELLKQPQYQPMPTEDQVVSVWA 476


>gi|170729216|ref|YP_001763242.1| F0F1 ATP synthase subunit beta [Shewanella woodyi ATCC 51908]
 gi|226740675|sp|B1KQ34|ATPB_SHEWM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169814563|gb|ACA89147.1| ATP synthase F1, beta subunit [Shewanella woodyi ATCC 51908]
          Length = 458

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G +  +      V      V  + D +  + +  D + +V + +   +V    +G  
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDAVPQVYDALEIKSE--DLVLEVQQQLGGGVVRTIAMGSS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG+P+D    +G+ +    I  + P   +
Sbjct: 59  DGLRRGLEVVNSGSPISVPVGEKTLGRIMNVLGQPVDEAGEIGEEE-RYVIHREAPSYED 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + 
Sbjct: 118 QSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 178 VGERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 238 FFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   +
Sbjct: 296 YVPADDLTDPSPATTFAHLDATVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + +  ++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 356 ANGVQTVLQRYKELKDIIAILGMDELSDED-KTTVSRARKIEKYLSQP 402


>gi|6687447|emb|CAB64950.1| ATP synthase beta subunit [Donatia sp. Morgan 2142]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 21  GRIVQIIGPVLDVAFPPDKMPNIYNALVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|5758894|gb|AAD50868.1| ATP synthase beta subunit [Liriope muscari]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|19114063|ref|NP_593151.1| F1-ATPase beta subunit Atp2 [Schizosaccharomyces pombe 972h-]
 gi|114565|sp|P22068|ATPB_SCHPO RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|6433997|emb|CAB60704.1| F1-ATPase beta subunit Atp2 [Schizosaccharomyces pombe]
          Length = 525

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/385 (27%), Positives = 177/385 (45%), Gaps = 19/385 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G    I       GR++N +G+P+D    +    
Sbjct: 100 VGENTVRTIAMDGTEGLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVK 159

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I +  P    +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 160 YS-PIHADAPSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 218

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         +   K+ +V    +E P  R   
Sbjct: 219 NIAKAHGGYSVFTGVGERTREGNDLYREMQETGVIKLEGESKAALVFGQMNEPPGARARV 278

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  +
Sbjct: 279 ALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAM 338

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+RS++E G YP VDP
Sbjct: 339 QERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVDP 396

Query: 354 LASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +   L  S+  ++  ++  +DI  I G     +      V +   
Sbjct: 397 LDSKSRMMDPRILGEEHYNLAGSVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 455

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +  +VF  I  +L
Sbjct: 456 VQRFLSQP---FAVAEVFTGIEGRL 477


>gi|30023337|ref|NP_834968.1| F0F1 ATP synthase subunit beta [Bacillus cereus ATCC 14579]
 gi|47569800|ref|ZP_00240471.1| ATP synthase F1, beta subunit [Bacillus cereus G9241]
 gi|218231162|ref|YP_002370080.1| F0F1 ATP synthase subunit beta [Bacillus cereus B4264]
 gi|229112719|ref|ZP_04242252.1| ATP synthase subunit beta [Bacillus cereus Rock1-15]
 gi|229147846|ref|ZP_04276187.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST24]
 gi|296505733|ref|YP_003667433.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis BMB171]
 gi|81837221|sp|Q814W2|ATPB_BACCR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739978|sp|B7HFK1|ATPB_BACC4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|29898898|gb|AAP12169.1| ATP synthase beta chain [Bacillus cereus ATCC 14579]
 gi|47553542|gb|EAL11922.1| ATP synthase F1, beta subunit [Bacillus cereus G9241]
 gi|218159119|gb|ACK59111.1| ATP synthase F1, beta subunit [Bacillus cereus B4264]
 gi|228635496|gb|EEK91985.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST24]
 gi|228670700|gb|EEL26011.1| ATP synthase subunit beta [Bacillus cereus Rock1-15]
 gi|296326785|gb|ADH09713.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis BMB171]
          Length = 468

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  L 
Sbjct: 48  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGELP 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 346 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|212896654|gb|ACJ38530.1| membrane-bound ATP synthase subunit B [Kennedia nigricans]
          Length = 474

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDMGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|118917404|dbj|BAF40510.1| ATP synthase beta subunit [Meineckia phyllanthoides subsp.
           somalensis]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVIKGRDTAGQQINVICEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|56236576|gb|AAV84655.1| ATP synthase beta subunit [Phyllocladus alpinus]
          Length = 424

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDAS-ARS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRPAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + S VGER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFSGVGERTREGNDLYMEMKESGVIREQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|3850944|gb|AAC72164.1| ATP synthase beta subunit [Orites lancifolia]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|56695106|ref|YP_165453.1| H+-transporting two-sector ATPase, flagellum-specific [Ruegeria
           pomeroyi DSS-3]
 gi|56676843|gb|AAV93509.1| H+-transporting two-sector ATPase, flagellum-specific [Ruegeria
           pomeroyi DSS-3]
          Length = 445

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 160/415 (38%), Positives = 245/415 (59%), Gaps = 3/415 (0%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVI 63
            + LA  AE  S +LV   G ++ +      +  L++   +GD V  +     +LG +V+
Sbjct: 4   PDPLALKAEFDSLSLVRHVGRVTGVAGGVIQIQGLARQAQIGDRVELKRNFGPSLGGEVL 63

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++    + + P    E +SLG+ V        +P   W GRV++  G+P+DG   L +G 
Sbjct: 64  QVEGSTINMLPDSAPEGVSLGNRVVLHPIPGFAPGRHWLGRVVDPFGRPLDGR-PLMRGS 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + ++M   PPA+ R+ + +   TG+  ++   P+  GQR+G+FAGSG+GKS+LL+  A+
Sbjct: 123 KARDLMRAPPPAVQRKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSLLATLAK 182

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           S   D V+++L+GERGREV EF+   LG + L +SV+V ATSD+S ++R+     A+T+A
Sbjct: 183 SMQADAVVVALIGERGREVNEFVAKALGPEGLARSVIVAATSDQSALVRRRCAWAAMTVA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E    +G NVL + DSITRFA + REI+   GE P  RGYP SV   +  L ER GP  +
Sbjct: 243 ESLRDEGLNVLYLADSITRFAEAHREISAAMGEAPALRGYPPSVTPLITGLCERAGPGTE 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT V SVLV G + ++P+AD +R +LDGHIVLNR +AE GR+P +D   SVSR   
Sbjct: 303 KQGDITGVFSVLVAGSDMDEPVADILRGVLDGHIVLNREIAERGRFPAIDISRSVSRSLP 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            A + ++  L+     LI  +E++  +   G Y  G D +LD+AV   P +  FL
Sbjct: 363 DAATPEQNALIGEARRLIGAYEQSEVMIKAGLYSEGADPLLDQAVRVWPELDAFL 417


>gi|297837941|ref|XP_002886852.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332693|gb|EFH63111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257452841|ref|ZP_05618140.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. 3_1_5R]
 gi|257466794|ref|ZP_05631105.1| F0F1 ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917942|ref|ZP_07914182.1| ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059382|ref|ZP_07923867.1| ATP synthase subunit beta [Fusobacterium sp. 3_1_5R]
 gi|313685058|gb|EFS21893.1| ATP synthase subunit beta [Fusobacterium sp. 3_1_5R]
 gi|313691817|gb|EFS28652.1| ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC 25563]
          Length = 465

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEIS 82
           G I+ I S    V    +   + + +  Q    + + +V + +  ++V    +   + + 
Sbjct: 4   GKITQIISAVVDVEFKDELPKIYNALKVQVGEKELVLEVQQHLGNNVVRTVAMDSTDGLL 63

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N LG+P+D    + + +  + I  + P    ++ V
Sbjct: 64  RGMEVMDTGAPITVPVGKAVLGRILNVLGEPVDQKGPV-ETEEYLPIHREAPKFEEQETV 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGER 182

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+   +     +  K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 183 TREGRDLYNEMTESGVLNKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R +A  G YP VDPL S S+         +  ++   
Sbjct: 301 ADDLTDPAPATTFSHLDATTVLSRDIASLGIYPAVDPLDSTSKALSPDIVGKEHYEVARE 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R+ E +DI  I G     D      V +   I  F  Q 
Sbjct: 361 VQRVLQRYTELQDIIAILGMDELGDED-KLVVSRARKIQRFFSQP 404


>gi|194267366|gb|ACF35669.1| ATP synthase beta subunit [Athertonia diversifolia]
          Length = 491

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|155029323|dbj|BAF75545.1| ATP synthase beta subunit [Tragia betonicifolia]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLD--------IVYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  +         V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTFGQEINVTCEAQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRVTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|126736547|ref|ZP_01752287.1| ATP synthase F1, beta subunit [Roseobacter sp. CCS2]
 gi|126713860|gb|EBA10731.1| ATP synthase F1, beta subunit [Roseobacter sp. CCS2]
          Length = 474

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 190/418 (45%), Gaps = 20/418 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +       +   +V   +  + V    +   E + 
Sbjct: 6   GKITQVIGAVVDVQFDDHLPEILNALTTDNNGKELTLEVAQHLGENTVRAIAMDSTEGLV 65

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G P+D    +G+ D    I ++ PP   +   
Sbjct: 66  RGQDVSDEGTTITVPVGDATLGRIMNVVGDPVDEKGPIGEKD-RRSIHAEAPPFEAQSTA 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   +++             K  +V    +E P  R    L+ +T+AE F  +  
Sbjct: 185 TREGNDLYYEFIESGVIDAEDLTKSKVALVYGQMNEPPGARMRVALSGLTMAESFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SRL D A    +
Sbjct: 303 VQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              + + +  ++ R++  +DI  I G     +      V +   I  FL Q P D++ 
Sbjct: 363 HYAVAADVQQMLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQ-PFDVAQ 418


>gi|119368506|ref|YP_913194.1| ATP synthase beta subunit [Gossypium barbadense]
 gi|125987718|sp|A0ZZ42|ATPB_GOSBA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|119224868|dbj|BAF41254.1| ATP synthase beta subunit [Gossypium barbadense]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGTALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYNELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|114107140|ref|YP_740124.1| ATP synthase CF1 beta subunit [Daucus carota]
 gi|122233834|sp|Q0G9V5|ATPB_DAUCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|113200915|gb|ABI32431.1| ATP synthase CF1 beta subunit [Daucus carota]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVMDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEDHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34539287|gb|AAQ74527.1| F1-ATPase alpha subunit [Eichhornia paniculata]
          Length = 384

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/392 (22%), Positives = 158/392 (40%), Gaps = 23/392 (5%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   
Sbjct: 1   DGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRT 56

Query: 91  GRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G     P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG+
Sbjct: 57  GSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGL 115

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGER 198
           + +D   P+  GQR  +      GK+ +      +                 +   +G++
Sbjct: 116 KAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQK 175

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D
Sbjct: 176 RSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYD 235

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +  
Sbjct: 236 DLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S
Sbjct: 296 QAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGS 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
               + ++ E   +     +   +D      +
Sbjct: 356 SKLELAQYRE---VAAFAQFGSDLDAATQALL 384


>gi|7708139|emb|CAB89935.1| ATP synthase beta subunit [Aextoxicon punctatum]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KSRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|139522676|gb|ABO77747.1| ATP synthase beta subunit [Burmeistera truncata]
 gi|139522679|gb|ABO77749.1| ATP synthase beta subunit [Burmeistera auriculata]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|89112854|gb|ABD61039.1| ATPase alpha subunit [Beaucarnea recurvata]
          Length = 375

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 153/376 (40%), Gaps = 19/376 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 4   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 123 IDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 182

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 183 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 242

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L  
Sbjct: 243 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 302

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +         +D    
Sbjct: 303 RGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VAAFAQLGSDLDAATQ 359

Query: 405 KAVHQVPIIYDFLKQS 420
              ++   + +  KQ 
Sbjct: 360 ALPNRGAGLTEVPKQP 375


>gi|61968215|gb|AAX57034.1| ATP synthase beta subunit [Baccaurea javanica]
          Length = 479

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|14718099|gb|AAK72789.1| ATP synthase beta subunit [Koeberlinia spinosa]
          Length = 480

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V   S    + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVVFPPSNMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|62902863|gb|AAY19346.1| ATP synthase beta subunit [Glycine max]
          Length = 479

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        +    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRIRAVA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATEGLMRGMEVIDTGAALSVPVGGATLGRIFNGLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|15616316|ref|NP_244621.1| F0F1 ATP synthase subunit beta [Bacillus halodurans C-125]
 gi|14916533|sp|Q9K6H5|ATPB_BACHD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|10176378|dbj|BAB07473.1| ATP synthase beta subunit [Bacillus halodurans C-125]
          Length = 470

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 189/416 (45%), Gaps = 19/416 (4%)

Query: 21  VQGGYISSITSVYYTVTCLS-QYVCLGDFVVHQGKNSD--------NLGQVIRINLDIVY 71
           +  G+I+ +      V   S Q   L + +  + K +D         L   + +  D V 
Sbjct: 1   MNTGHITQVMGPVVDVRFQSGQLPELNNALRVEQKGADQNAVDVNVTLEVALHLGDDTVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +G  + +  G  V   G    +       GRV N LG+ ID D+ +        I  
Sbjct: 61  TIAMGSTDGLVRGTEVVDTGAAISVPVGEVTLGRVFNVLGESIDLDEPIPADAERSPIHR 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +  
Sbjct: 121 EAPKFEELSTKTEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHG 180

Query: 191 ---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF 
Sbjct: 181 GISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFR 240

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            K   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  + G
Sbjct: 241 DKQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKVG 298

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           ++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLAS SR      
Sbjct: 299 SVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEI 358

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +   + +++E +DI  I G     +      V +   I  FL Q+
Sbjct: 359 VGEEHYNVARQVQQTLQKYKELQDIIAILGMDELSEED-KLIVARARRIQFFLSQN 413


>gi|34582340|sp|Q9MRR9|ATPB_BRASC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687964|emb|CAB89702.1| ATP synthase beta subunit [Brasenia schreberi]
 gi|14717968|gb|AAK72726.1| ATP synthase beta subunit [Brasenia schreberi]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV      D  GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNSLVV---XGRDTAGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +    C  GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGCTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|305671673|gb|ADM63146.1| ATP synthase beta subunit [Pterocephalodes hookeri]
          Length = 478

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 2   GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYKEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPEIVGQKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|253579147|ref|ZP_04856417.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849245|gb|EES77205.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39BFAA]
          Length = 464

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/406 (25%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +     +   L + +      +  + +V  ++  D+V    +   + +
Sbjct: 7   GEVVQVIGPVLDIRFAHDELPPLLNAIEIDNDGAKLVAEVAQQVGDDVVRCIAMNSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GRV N LG P+D   +  +      I  + P    +  
Sbjct: 67  VRGAKALDTGGPISVPVGEECLGRVFNLLGDPVDNLPA-PEAKERWSIHRQAPSYEEQMP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 126 ATEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF  +   +VLL 
Sbjct: 186 RTREGNDLYNEMKESGVIDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  S LD   VL+R ++ +G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFSHLDATTVLSREISSQGIYPAVDPLDSTSRILSPEIVGTEHYEIAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           S+  ++ R++E +DI  I G     +    + V +   +  FL QS
Sbjct: 364 SVQRVLQRYKELQDIIAIMGMDELSEED-KRTVSRARKVQRFLSQS 408


>gi|146185860|ref|XP_001032631.2| ATP synthase beta chain, mitochondrial precursor, putative
           [Tetrahymena thermophila]
 gi|146142891|gb|EAR84968.2| ATP synthase beta chain, mitochondrial precursor, putative
           [Tetrahymena thermophila SB210]
          Length = 497

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/428 (25%), Positives = 188/428 (43%), Gaps = 18/428 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
             +  A+  +   V   G +S +      V    +   + + +  QG     + +V +  
Sbjct: 13  AFSTTAKKEAPKTVKANGQVSQVIGAVVDVQFEGELPQILNALEVQGTQHRLVLEVAQHL 72

Query: 67  LD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
            D  V    +   E +  G  V   G    +       GR++N +G+PID    +    L
Sbjct: 73  GDSRVRTIAMDSTEGLVRGQPVVDTGLPISVPVGPGTLGRIMNVIGEPIDQRGPIKAAKL 132

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              I    P   ++    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 133 -YPIHRDAPSFTDQATSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINN 191

Query: 185 DCFDKV---IISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMA 234
                    + + VGER RE  +   + +        +   +  ++    +E P  R   
Sbjct: 192 VAKHHGGYSVFAGVGERTREGNDLYHEMMDSKVISVKEGESRCALIFGQMNEPPGARARV 251

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L
Sbjct: 252 GLTGLTVAEYFRDEEGKDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGAL 311

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VLNR L E G YP VDP
Sbjct: 312 QERI--TTTQKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLNRGLTELGIYPAVDP 369

Query: 354 LASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D     +E   +   +  L+  ++  +DI  I G     +      V +   
Sbjct: 370 LDSTSRMLDPITIGEEHYTVARGVQKLLQDYKSLQDIIAILGVDDLSEED-KLVVARARK 428

Query: 413 IYDFLKQS 420
           +  FL Q 
Sbjct: 429 VQKFLSQP 436


>gi|118917420|dbj|BAF40526.1| ATP synthase beta subunit [Lunania parviflora]
 gi|118917422|dbj|BAF40527.1| ATP synthase beta subunit [Scolopia spinosa]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|115564933|emb|CAJ70619.1| ATP synthase beta subunit [Distylium myricoides]
          Length = 466

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|61968307|gb|AAX57080.1| ATP synthase beta subunit [Richeriella gracilis]
          Length = 473

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|18077607|emb|CAD11920.1| ATP synthase beta subunit [Valdivia gayana]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      V     +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 13  SGRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAV 70

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 71  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 130 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 189

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 190 SVFGGVGERTREGNDLYMEMKESGVINEQNIGESKVALVYGQMNEPPGARMRVGLTALTM 249

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 250 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 308 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 367

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 368 LQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 426

Query: 420 S 420
            
Sbjct: 427 P 427


>gi|21633263|gb|AAM52106.1| ATP synthase beta subunit [Ipomoea tiliacea]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+    ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRGNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    + + + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPV-ETNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7578493|gb|AAF64069.1|AF132887_1 ATP synthase, B subunit [Retanilla trinervia]
          Length = 496

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQKMNVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYIEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|325126872|ref|YP_004286109.1| ATP synthase CF1 beta subunit [Fragaria vesca subsp. vesca]
 gi|324022784|gb|ADY15358.1| ATP synthase CF1 beta subunit [Fragaria vesca subsp. vesca]
          Length = 492

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|262400757|gb|ACY66246.1| ATP synthase CF1 beta subunit [Brassica napus]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTS-PIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6017838|gb|AAF01653.1| ATP synthase beta subunit [Heuchera sanguinea]
          Length = 496

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLRRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|6625703|gb|AAF19362.1|AF188265_8 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 460

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +D+  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDVIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|300871682|ref|YP_003786555.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Brachyspira pilosicoli 95/1000]
 gi|300689383|gb|ADK32054.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI
           [Brachyspira pilosicoli 95/1000]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 158/407 (38%), Positives = 235/407 (57%), Gaps = 8/407 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G +  +            +  LGD   +++  ++    +VI      V +   G    I+
Sbjct: 39  GKVKEVIGSLVVSEG--PFAKLGDICRIYKNDDTYIDAEVIGFRNQDVLLSTYGSVNGIT 96

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G++V+ +     I  S    G V+N +GKP+ G       +  + I       +NR R+
Sbjct: 97  FGNMVYSFDKPLSIICSEKILGTVLNGMGKPLSGGGH-KFYETPIPINHTSVNPLNRPRI 155

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           +K  +TG+R ID    +  GQR+ + +G+G+GKSTLLSM AR+   D  +I+L+GER RE
Sbjct: 156 KKNIQTGVRAIDGLLTVGKGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALIGERRRE 215

Query: 202 VREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V +FI  D   + LK+SVVVVATSD++P+LR  A  TA TIAEYF  +G +V+ ++DS+T
Sbjct: 216 VLDFIERDLGEEGLKRSVVVVATSDDAPLLRVRAAYTATTIAEYFRDQGKDVMFMVDSVT 275

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI  + GE P  RGY  SVFSEL +LLER G S K  G ITA  +VLV+GD+ 
Sbjct: 276 RFALAQREIGLSRGEPPTTRGYTPSVFSELAQLLERTGTSSK--GTITAFYNVLVEGDDL 333

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           ++PI D+VR ILDGHIVL+R LA  G +P +D   S+SR+ ++  S   KK       + 
Sbjct: 334 DEPITDAVRGILDGHIVLSRDLANRGHFPAIDINKSISRIMNEVVSNMHKKAAREFLKMS 393

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             + E +++ +IGGY  G    +D+A+   P++  +L+Q   +LSS 
Sbjct: 394 ADYNEVKELIMIGGYAKGSMPEVDRAIEYKPLMDRYLQQDMYELSSF 440


>gi|183206590|gb|ACC54493.1| ATP synthase beta subunit [Campanula erinus]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|183206588|gb|ACC54492.1| ATP synthase beta subunit [Campanula creutzburgii]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|183206586|gb|ACC54491.1| ATP synthase beta subunit [Campanula pinatzii]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|183206500|gb|ACC54448.1| ATP synthase beta subunit [Canarina canariensis]
          Length = 480

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKDSGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIISDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|113910828|gb|ABI48146.1| ATPase beta subunit [Pallavicinia lyellii]
          Length = 472

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  ++ GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRNSAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVTDTGAPLSVPVGEATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVDTG-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ISGLDELSEED-RLTVARARKIERFLSQP 412


>gi|33318669|gb|AAQ05218.1| ATP synthase beta subunit [Podocarpus chinensis]
          Length = 479

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V+     +       +V   K+ +  GQ+I++  ++        V   
Sbjct: 6   GRIAQIIGPVLDVSFPPDGMPFIYNSLIV---KDQNTTGQLIQVTCEVQQLLGNNKVRAV 62

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +        I    
Sbjct: 63  AMSATDGLMRGMRVIDTGAPLSVPVGGTTLGRIFNVLGEPVDDLGPVDAS-TRSPIHRPA 121

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        
Sbjct: 122 PAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 181

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + S VGER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 182 SVFSGVGERTREGNDLYMEMKESGVIREQNISESKVALVYGQMNEPPGARMRVGLTALTM 241

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 242 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--T 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 300 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTM 359

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 360 LQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 418

Query: 420 S 420
            
Sbjct: 419 P 419


>gi|18077601|emb|CAD11917.1| ATP synthase beta subunit [Paracryphia alticola]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708211|emb|CAB90049.1| ATP synthase beta subunit [Coriaria myrtifolia]
          Length = 494

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V   
Sbjct: 16  SGRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAV 73

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 74  AMSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 132

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 133 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 192

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 193 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 252

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 253 AEYFRDVNEQDVLLFIDNIXRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 310

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++  V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 311 STKEGSITSIQXVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 370

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 371 LQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLXVARARKIERFLSQ 429

Query: 420 S 420
            
Sbjct: 430 P 430


>gi|54310642|ref|YP_131662.1| F0F1 ATP synthase subunit beta [Photobacterium profundum SS9]
 gi|81828648|sp|Q6LLG8|ATPB1_PHOPR RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|46915085|emb|CAG21860.1| Putative AtpD, ATP synthase F1, beta subunit [Photobacterium
           profundum SS9]
          Length = 468

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 186/418 (44%), Gaps = 24/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G I  I      V      V  + D +    K    L  V+     +   +V    +
Sbjct: 1   MATGKIVQIIGAVVDVEFPQDSVPKVYDALKVDAKEKGTL--VLEVQQQLGGGVVRCIAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +  R   +       GR++N LG+PID    +G+ +    I  + P 
Sbjct: 59  GTSDGLRRGLSVENTDRPIEVPVGIATLGRIMNVLGEPIDECGEIGE-EQRYAIHREAPS 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         +
Sbjct: 118 YEEQSNETSLLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +F  +               K  +V    +E P  R    LT +T+AE
Sbjct: 178 FAGVGERTREGNDFYFEMQEAGVVNLENPSESKVAMVYGQMNEPPGNRLRVALTGLTMAE 237

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 238 RFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D 
Sbjct: 296 SGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +   +   +  L+ R++E +DI  I G     +    +AV +   I  FL Q 
Sbjct: 356 LVVGQEHYDIARGVQSLLQRYKELKDIIAILGMDELSEND-KQAVSRARKIERFLTQP 412


>gi|257852942|gb|ACV71482.1| ATP synthase beta subunit [Aneulophus africanus]
          Length = 478

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V+     +       VV   K  D  GQ I +  ++        V   
Sbjct: 10  GRIAQIIGPVLDVSFPPDKMPNIYNALVV---KGRDTGGQQINVTCEVQQLLGNNRVRAV 66

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 67  AMSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPV-ATRTTSPIHRSA 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 126 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 185

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 186 SVFGGVGERTREGNDLYMEMKESGVINEENITESKVALVYGQMNEPPGARMRVGLTALTM 245

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 246 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 304 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 364 LQPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQ 422

Query: 420 S 420
            
Sbjct: 423 P 423


>gi|183206548|gb|ACC54472.1| ATP synthase beta subunit [Symphyandra hofmannii]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/421 (27%), Positives = 187/421 (44%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + +V +G   DNLGQ I +  ++        V   
Sbjct: 10  SGRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 68  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 127 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 187 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 305 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 365 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|183206530|gb|ACC54463.1| ATP synthase beta subunit [Campanula carpatha]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIDQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|68164810|ref|YP_247606.1| ATP synthase CF1 beta subunit [Cucumis sativus]
 gi|67511405|emb|CAJ00765.1| ATP synthase CF1 beta chain [Cucumis sativus]
 gi|115498310|gb|ABI98752.1| ATP synthase CF1 beta subunit [Cucumis sativus]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DISGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLRRGMEVVDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34500004|gb|AAQ73584.1| ATP synthase beta subunit [Actinobacillus lignieresii]
          Length = 444

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/362 (29%), Positives = 176/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G   ++       GR++N LG+PID    +G+ +
Sbjct: 44  LGGGLVRCIALGTSDGLKRGLKVENTGNPIQVPVGTKTLGRIMNVLGEPIDEKGPIGE-E 102

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 103 ARWDIHRXAPSYEEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 162

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 163 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 222

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 223 TMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRIPSAVGYQPTLAEEMGVLQERI-- 280

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR
Sbjct: 281 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSR 340

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     +E   +   +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 341 QLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLS 399

Query: 419 QS 420
           Q 
Sbjct: 400 QP 401


>gi|12004119|gb|AAG43899.1|AF213768_1 ATP synthase beta subunit [Diospyros digyna]
          Length = 487

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|7578495|gb|AAF64070.1|AF132888_1 ATP synthase, B subunit [Quercus rubra]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      VT   + +       VV   K  D  GQ I +  ++        V   
Sbjct: 11  GSIAQIIGPVLDVTFPPRKMPNIYNALVV---KGRDTAGQQINVTCEVQQLLGNNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 68  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 127 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 187 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 247 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 365 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|152978010|ref|YP_001343639.1| F0F1 ATP synthase subunit beta [Actinobacillus succinogenes 130Z]
 gi|171472936|sp|A6VL57|ATPB_ACTSZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150839733|gb|ABR73704.1| ATP synthase F1, beta subunit [Actinobacillus succinogenes 130Z]
          Length = 458

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +   +    L    ++   +V    +G  + 
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQNAVPKVYDALKVEEGGLTLEVQQQLGGGVVRCIALGTSDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR++N LG+PID    +G  + +  I  + P   ++ 
Sbjct: 61  LKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEE-TWAIHREAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 120 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  
Sbjct: 180 ERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   +  
Sbjct: 298 PADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVAR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I       +      V +   I  FL Q 
Sbjct: 358 GVQGILQRYKELKDIIAILSMDELSEDD-KLVVARARKIERFLSQP 402


>gi|319944942|ref|ZP_08019204.1| ATP synthase F1 sector beta subunit [Lautropia mirabilis ATCC
           51599]
 gi|319741512|gb|EFV93937.1| ATP synthase F1 sector beta subunit [Lautropia mirabilis ATCC
           51599]
          Length = 474

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 168/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + +  G  V + G   ++       GRV++ LG+PID    + + +
Sbjct: 52  LGDGIVRTIAMGSSDGLRRGMPVKNTGANIQVPVGPAVLGRVMDVLGRPIDERGPI-QTE 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G +IG+F G+G+GK+  +     
Sbjct: 111 EHRGIHQPAPKFDELSPSVELLETGIKVIDLICPFAKGGKIGLFGGAGVGKTVNMLELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +   +     + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 171 NIAKEHSGLSVFAGVGERTREGNDFYHEMSDAKVIVQDDLSQSKVAMVFGQMNEPPGNRL 230

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ R
Sbjct: 231 RVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGR 290

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VD
Sbjct: 291 LQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVD 348

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      +   +   +   + R++E RDI  + G           AV +  
Sbjct: 349 PLDSTSRQIDPNIIGEEHYNVTRGVQATLQRYKELRDIIALLGMDELS-PEDKLAVARAR 407

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 408 KIQRFLSQP 416


>gi|7708470|emb|CAB89926.1| ATP synthase beta subunit [Lambertia inermis]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+ ++ + +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 44  GQQTNVICEVQQLLGNNRVRAVAMSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLG 103

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 104 EPVDNLGPV-ATRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 162

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +  ++               K  +
Sbjct: 163 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVAL 222

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 223 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 282

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 283 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 340

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 341 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDE 400

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +     AV +   I  FL Q 
Sbjct: 401 LSEED-RLAVARARKIERFLSQP 422


>gi|6017816|gb|AAF01642.1| ATP synthase beta subunit [Nepenthes alata]
          Length = 492

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 15  GRIDQIIGPVLDVAFPPGKMPNIYNALVVEG--RDTAGQPINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVVDTGSPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|114538|sp|P28250|ATPB_ANGLY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11190|emb|CAA41331.1| adenosinetriphosphatase [Angiopteris lygodiifolia]
          Length = 492

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/428 (26%), Positives = 186/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINL------- 67
           S  +    GYI+ I      V     +   + + ++ +G+N    GQ I +         
Sbjct: 11  STAVEKNAGYITQIIGPVLDVAFSPGKLPNIYNSLIVKGQNPA--GQEINVTCEVQQLLG 68

Query: 68  -DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S
Sbjct: 69  NDRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVDAGTTS 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 129 -PIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++ +SG +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSASSGRMPSAVGYQPTLATEMGSL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  +  D   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|305671681|gb|ADM63150.1| ATP synthase beta subunit [Zabelia tyaihyoni]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGNKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|156530101|gb|ABU75147.1| AtpB [Ailanthus integrifolia]
          Length = 468

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRATSPIHKPAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|124361670|gb|ABN09277.1| ATP synthase beta subunit [Diospyros fulvopilosa]
          Length = 465

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|114329975|ref|YP_740657.1| ATP synthase CF1 beta subunit [Nandina domestica]
 gi|122165954|sp|Q09FV4|ATPB_NANDO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|114054477|gb|ABI49870.1| ATP synthase CF1 beta subunit [Nandina domestica]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|29336977|sp|Q9MTG8|ATPB_RAPSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|8052352|emb|CAB92327.1| ATPase beta subunit [Raphanus sativus]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK++L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTSLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINELNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|301644600|ref|ZP_07244589.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
 gi|301077075|gb|EFK91881.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 239/441 (54%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGTETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPLGPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+  I+    +  GQR+G+FAGSG+GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVHPINALLTVGRGQRMGLFAGSGVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F+  RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|257852962|gb|ACV71492.1| ATP synthase beta subunit [Luxemburgia octandra]
          Length = 478

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVIFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|156530221|gb|ABU75207.1| AtpB [Soulamea terminalioides]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|115564929|emb|CAJ70617.1| ATP synthase beta subunit [Fortunearia sinensis]
 gi|115564943|emb|CAJ70599.1| ATP synthase beta subunit [Sycopsis sinensis]
          Length = 468

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|113910850|gb|ABI48157.1| ATPase beta subunit [Tetraphis pellucida]
          Length = 465

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMKVIDTGAPLTVPVGEATLGRIFNVLGEPVDNLGPVD-VSTTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|6688861|emb|CAB65308.1| ATP synthase beta subunit [Nolana humifusa]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVXAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 79  MSATDGLTXGMXVVXTGAPISVPVGEATLGRIFNVLGEPVDNLGPVDTSTMS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|14717990|gb|AAK72737.1| ATP synthase beta subunit [Carya glabra]
          Length = 483

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|24940180|emb|CAD43372.1| ATP synthase beta subunit [Echium vulgare]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRVVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718149|gb|AAK72813.1| ATP synthase beta subunit [Nolana humifusa]
          Length = 483

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 6   GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVXAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 64  MSATDGLTXGMXVVXTGAPISVPVGEATLGRIFNVLGEPVDNLGPVDTSTMS-PIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 419


>gi|5758908|gb|AAD50882.1| ATP synthase beta subunit [Riedelia aff. wrayii SBG 83-203]
          Length = 496

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    I       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSIPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVDTSTTS-PIHRPAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|224830598|gb|ACN66394.1| ATP synthase beta chain [Triclisia sp. SBH-2009]
          Length = 456

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGXEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|195183534|dbj|BAG66979.1| ATP synthase beta subunit [Rinorea dentata]
 gi|195183536|dbj|BAG66980.1| ATP synthase beta subunit [Rinorea ilicifolia]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|156530219|gb|ABU75206.1| AtpB [Soulamea sp. JWC-20007]
          Length = 470

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNISKSKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|61968331|gb|AAX57092.1| ATP synthase beta subunit [Drypetes madagascariensis]
          Length = 478

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V + +N   +GQ I +  ++        V    
Sbjct: 9   GRITQIIGPVLDVTFPPGKMPNIYNALVVKSQN--TVGQQINVTCEVQQLLGNNRVRTVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRITSPIHKSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINGENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPKIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|6017824|gb|AAF01646.1| ATP synthase beta subunit [Rheum rhaponticum]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G ++ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTSGHPINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 318 QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEAHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3850950|gb|AAC72167.1| ATP synthase beta subunit [Musgravea heterophylla]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYPRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|325266848|ref|ZP_08133519.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC
           33394]
 gi|324981589|gb|EGC17230.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC
           33394]
          Length = 465

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG P+D    +G  D
Sbjct: 45  LGDGVVRTIAMGSTDGLKRGLAVNNTGAPITVPVGKATLGRIMDVLGNPVDEAGPIG-SD 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 QTRAIHQPAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           ++AE+F  + D           +D+I R+  +  E++   G +P A GY  ++  E+ RL
Sbjct: 224 SMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 283

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 284 QERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDP 341

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR  D      +   +   +   + +++E RDI  I G     D      V +   
Sbjct: 342 LDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDED-KLTVIRARK 400

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 401 IQRFLSQP 408


>gi|303248343|ref|ZP_07334604.1| flagellar protein export ATPase FliI [Desulfovibrio fructosovorans
           JJ]
 gi|302490251|gb|EFL50165.1| flagellar protein export ATPase FliI [Desulfovibrio fructosovorans
           JJ]
          Length = 441

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 154/426 (36%), Positives = 236/426 (55%), Gaps = 14/426 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVH------QGKNSDNLGQVIRINLDIVYICPV 75
             G +S +  +            +G            G+  +   +V+          P 
Sbjct: 21  TFGKVSKVVGLIA--EGRGIRAPVGSVCQLLSDDGGNGQIREVPAEVVGFRDGACLFMPY 78

Query: 76  GIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    I+ G L+ +     +      + GRVI+A G PID   ++   + +  I +  P 
Sbjct: 79  GDLRGIAPGTLIRNTSTPPLFPVGRRYLGRVIDAFGNPIDDGAAITPANFN-PIFASAPM 137

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            M+R R+ +    G+R I+    L  GQR+G+ AGSG+GKSTL+ M AR+   D  +I L
Sbjct: 138 PMDRPRINEPMDVGVRAINGLLTLGKGQRVGIMAGSGVGKSTLMGMIARNTKADINVIGL 197

Query: 195 VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGRE+REFI +D   + + +SVVVVATSD+SP++R  A   A  +AE+F  +G +V+
Sbjct: 198 VGERGRELREFIEKDLGPEGMARSVVVVATSDQSPLIRMRAAYAATAMAEFFRDQGGDVI 257

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA + RE+   +GE P  RGY  SVF++LP+LLER G +   +G+IT + +V
Sbjct: 258 LMMDSVTRFAMAGREVGLAAGEPPTTRGYTPSVFAQLPKLLERAGKNN--QGSITGIYTV 315

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LVDGD+ N+PIAD+VRSILDGHIVL R LA++G +P +D L S+SRL       +     
Sbjct: 316 LVDGDDFNEPIADAVRSILDGHIVLTRDLADQGHFPAIDVLKSISRLRSDVTPKEALTAG 375

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQE 432
             +  L+  +    D+  IG Y  G +  +D+A+  +  I  FL+Q+  +  + D  F  
Sbjct: 376 REMIRLLATYRRVEDMVNIGAYARGANPEIDRAIDMIGPINGFLRQAVDESQTLDESFAA 435

Query: 433 ITKKLQ 438
           I + ++
Sbjct: 436 ILELMK 441


>gi|195183539|dbj|BAG66981.1| ATP synthase beta subunit [Rinorea neglecta]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|90023606|ref|YP_529433.1| F0F1 ATP synthase subunit beta [Saccharophagus degradans 2-40]
 gi|118573741|sp|Q21DK8|ATPB_SACD2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|89953206|gb|ABD83221.1| ATP synthase F1, beta subunit [Saccharophagus degradans 2-40]
          Length = 470

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 179/413 (43%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  E 
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPKVYDALTVADKGLTLEVQQQLGDGVVRAIAMGGSEG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +S G  V + G    +       GR+++ LG PID    + + +    I  K P      
Sbjct: 61  VSRGLAVENTGAPINVPVGTATLGRIMDVLGNPIDEKGPINETE-RASIHRKAPKYDELA 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             E+   TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 ASEELLATGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +T+AE F  +
Sbjct: 180 ERTREGNDFYFEMQEAGVVNVDKFDESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDE 239

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 240 GKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  D      
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDSSSRQLDPLIIGQ 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 EHYDTARGVQSVLQRYKELKDIIAILGMDELSEED-KLTVSRARKIERFLSQP 409


>gi|7688429|emb|CAB89730.1| ATP synthase beta subunit [Xanthophyllum sp. Coode 7760]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVEGRDTADQQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 73  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708185|emb|CAB90033.1| ATP synthase beta subunit [Boykinia rotundifolia]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLRRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|24940194|emb|CAD43379.1| ATP synthase beta subunit [Glandora diffusa]
          Length = 483

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 13  GRVVQIIGPVLDVAFSPGKMPNIYNALVVQG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61098498|gb|AAX37448.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098500|gb|AAX37449.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098502|gb|AAX37450.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098504|gb|AAX37451.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098506|gb|AAX37452.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098508|gb|AAX37453.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098510|gb|AAX37454.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098512|gb|AAX37455.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098514|gb|AAX37456.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098516|gb|AAX37457.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098518|gb|AAX37458.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098520|gb|AAX37459.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098522|gb|AAX37460.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098524|gb|AAX37461.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098526|gb|AAX37462.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098528|gb|AAX37463.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098530|gb|AAX37464.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098532|gb|AAX37465.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098534|gb|AAX37466.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098536|gb|AAX37467.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098538|gb|AAX37468.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098540|gb|AAX37469.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098542|gb|AAX37470.1| ATP synthase beta subunit [Phlomis lychnitis]
 gi|61098544|gb|AAX37471.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098546|gb|AAX37472.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098548|gb|AAX37473.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098550|gb|AAX37474.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098552|gb|AAX37475.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098554|gb|AAX37476.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098556|gb|AAX37477.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098558|gb|AAX37478.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098560|gb|AAX37479.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098562|gb|AAX37480.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098564|gb|AAX37481.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098566|gb|AAX37482.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098568|gb|AAX37483.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098570|gb|AAX37484.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana]
 gi|61098572|gb|AAX37485.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098574|gb|AAX37486.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098576|gb|AAX37487.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098578|gb|AAX37488.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098580|gb|AAX37489.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098582|gb|AAX37490.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098584|gb|AAX37491.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098586|gb|AAX37492.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita]
 gi|61098588|gb|AAX37493.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica]
 gi|61098590|gb|AAX37494.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica]
 gi|61098592|gb|AAX37495.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica]
 gi|61098594|gb|AAX37496.1| ATP synthase beta subunit [Phlomis purpurea]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 184/421 (43%), Gaps = 28/421 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           QG  I  I  V        +   + + +V +G+  D  GQ I +  ++        V   
Sbjct: 20  QGNIIQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|57868932|gb|AAW57462.1| ATP synthase beta subunit [Fouquieria columnaris]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVSDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|317181103|dbj|BAJ58889.1| flagellum-specific ATP synthase [Helicobacter pylori F32]
          Length = 434

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 233/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITMPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|305671679|gb|ADM63149.1| ATP synthase beta subunit [Centranthus ruber]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V+     +       VV   K  D  G+ I +  ++        V   
Sbjct: 13  GRIIQIIGPVLDVSFPPGNMPNIYNALVV---KGRDTAGEPINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  +   G    +       GR+ N LG+P+D    +        I    
Sbjct: 70  AMSATDGLTRGMEMSDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTRFPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              A   D   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPAIVGDKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|326319068|ref|YP_004236740.1| flagellar protein export ATPase FliI [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375904|gb|ADX48173.1| flagellar protein export ATPase FliI [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 474

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 155/453 (34%), Positives = 239/453 (52%), Gaps = 26/453 (5%)

Query: 8   LAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRI 65
           L+   E  ++   ++  G ++ +T +      +   V +G   + Q    +  L +V+  
Sbjct: 21  LSGARERLAEGTALETRGTLTRLTGLVLEAAGI--RVPVGSQCLVQMPGHEAVLAEVVGF 78

Query: 66  NLDIVYICPVGIGEEISLGDLVFHW-------------------GRFRISPSACWCGRVI 106
           + D  ++ P G    +S G  V                      G  R+       GRV+
Sbjct: 79  SGDRAFLMPAGDIHGLSSGASVVPAAPYVPVPRLGDSTRPSTAAGILRLPMGDGLLGRVV 138

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           ++ G P+D    +     S  +  +   AM+R  V +   TG+R I+    +  GQR+G+
Sbjct: 139 DSQGLPLDHGGPVQDVS-SEPMDRRQINAMDRDPVREMLDTGVRAINALLSVGRGQRLGL 197

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDE 226
           FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED LG+  ++  VVVA   +
Sbjct: 198 FAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGEQDRERAVVVAAPAD 257

Query: 227 SPILRKM-APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +P L +M     A  IAE+F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S
Sbjct: 258 APPLLRMQGAAYATAIAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPS 317

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
            F++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE 
Sbjct: 318 CFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADSARAILDGHIVLSRALAET 377

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G +P +D   S SR+     S +   L      +  R++++RD+  +G Y  G D  LD+
Sbjct: 378 GHFPAIDIEQSASRVMHNVASREHFDLARRFRAVYSRYQKSRDLIQVGAYMSGSDPALDE 437

Query: 406 AVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437
           A+   P +  FL+Q   + +  +D    +   L
Sbjct: 438 AIRLQPAMAAFLQQDMFEAAPMQDSLHAMAAVL 470


>gi|183206682|gb|ACC54539.1| ATP synthase beta subunit [Berenice arguta]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 5   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 63  MSATDGLMRGMEVVDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|183206614|gb|ACC54505.1| ATP synthase beta subunit [Musschia aurea]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/421 (27%), Positives = 187/421 (44%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G+I  I      V     +   + + +V +G   D LGQ I +  ++        V   
Sbjct: 10  TGHIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 68  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 127 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 187 SVFGGVGERTREGNDLYKEMKDSGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 305 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 365 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|183206498|gb|ACC54447.1| ATP synthase beta subunit [Campanula tubulosa]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917340|dbj|BAF40455.1| ATP synthase beta subunit [Ditaxis montevidensis]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINELNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75328431|sp|Q85V28|ATPB_HYAOR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351929|emb|CAD48412.1| ATP synthase beta subunit [Hyacinthus orientalis]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6687623|emb|CAB65029.1| ATP synthase beta subunit [Gelsemium sempervirens]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|15422204|emb|CAC60244.1| ATP synthase beta subunit [Acicarpha tribuloides]
 gi|15422206|emb|CAC60243.1| ATP synthase subunit beta [Anopterus macleayanus]
 gi|18072462|emb|CAD11921.1| ATP synthase beta subunit [Anopterus glandulosus]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|183206584|gb|ACC54490.1| ATP synthase beta subunit [Campanula hierapetrae]
          Length = 497

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 20  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|156530217|gb|ABU75205.1| AtpB [Soulamea amara]
          Length = 473

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|190358670|sp|A6BM09|ATPB_GNEPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|149941374|dbj|BAF64854.1| ATP synthase CF1 beta subunit [Gnetum parvifolium]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 184/417 (44%), Gaps = 24/417 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDN----LGQVIRINLDI-VYICPVGI 77
           G I+ I      V+        + + ++ +G+  D       +V ++  +  V    +  
Sbjct: 18  GQITQIIGPVLDVSFPPGNLPNIYNSLIVKGQKDDRAFSVTCEVQQLLGNNTVRAVAMSA 77

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + ++ G  V + G    +       GR+ N LG+P+D    +   D +  I    P   
Sbjct: 78  TDGLTRGMKVINTGACLSVPVGKATLGRIFNVLGEPVDNLGPVD-TDTTFPIHRPAPAFP 136

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 137 QLDTNLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 196

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+ +AEYF
Sbjct: 197 GVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYF 256

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +K
Sbjct: 257 RDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKK 314

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 315 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPE 374

Query: 365 WSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 IVGEQHYEIAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|113910860|gb|ABI48162.1| ATPase beta subunit [Rhabdoweisia fugax]
          Length = 456

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 12  KGQNTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGEATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|57868940|gb|AAW57466.1| ATP synthase beta subunit [Cantua buxifolia]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNITDSKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|75755666|ref|YP_319772.1| ATP synthase CF1 beta subunit [Acorus calamus]
 gi|161622317|ref|YP_001586189.1| ATP synthase CF1 beta subunit [Acorus americanus]
 gi|118573502|sp|Q3V527|ATPB_ACOCL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|69214414|gb|AAZ03787.1| ATP synthase beta chain [Acorus americanus]
 gi|74381716|emb|CAI53801.1| ATPase beta subunit [Acorus calamus]
 gi|160369860|gb|ABX38751.1| ATP synthase CF1 beta subunit [Acorus americanus]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEEKIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|15966787|ref|NP_387140.1| F0F1 ATP synthase subunit beta [Sinorhizobium meliloti 1021]
 gi|307301615|ref|ZP_07581374.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti BL225C]
 gi|307316361|ref|ZP_07595805.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti AK83]
 gi|81633814|sp|Q92LK8|ATPB_RHIME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|15076059|emb|CAC47613.1| Probable ATP synthase beta chain [Sinorhizobium meliloti 1021]
 gi|306898201|gb|EFN28943.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti AK83]
 gi|306903313|gb|EFN33902.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti BL225C]
          Length = 504

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 188/412 (45%), Gaps = 19/412 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G ++ +      V     Q   + + +      +  + +V   +  + V    +   E +
Sbjct: 36  GRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGL 95

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N +G+P+D    L K      I  + P  +++  
Sbjct: 96  VRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPL-KTSARRAIHQEAPAYVDQST 154

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 155 EAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 214

Query: 198 RGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +   + +        G    K+ +V    +E P  R    LT +T+AE F  +G
Sbjct: 215 RTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEQFRDEG 274

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +   KG+IT+
Sbjct: 275 QDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITS 332

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      +
Sbjct: 333 VQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEE 392

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 393 HYEVSRKVQSTLQRYKALQDIIAILGMDELSEED-KIAVARARKIERFLSQP 443


>gi|183206488|gb|ACC54442.1| ATP synthase beta subunit [Campanula bellidifolia]
          Length = 494

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  DNLGQ I +  ++        V   
Sbjct: 17  GRIGQIIGPVLDVAFPPGKMPYIYNALVV---KGRDNLGQPINVTCEVQQLLGNNRVRAV 73

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 74  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 132

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 133 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 192

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 193 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 252

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 253 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 310

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 311 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 370

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 371 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 429

Query: 420 S 420
            
Sbjct: 430 P 430


>gi|219552184|gb|ACL26807.1| ATP synthase beta chain [Glochidion rubrum]
          Length = 423

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLKRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|254447640|ref|ZP_05061106.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015]
 gi|198262983|gb|EDY87262.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 118/408 (28%), Positives = 192/408 (47%), Gaps = 15/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V           G   +  GQ   +   +V    +G+ 
Sbjct: 1   MSTGTIVQVIGAVVDVEFPRGSVPKVYDALKTESGLTLEVQGQ---LGDGVVRTIAMGVS 57

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +S G  V + G    +       GR++N LG+PID    + K D +  I  + P   +
Sbjct: 58  EGLSRGVNVENTGSAISVPVGQGTLGRIMNVLGEPIDHAGDV-KSDETRAIHQEAPSYED 116

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + 
Sbjct: 117 QSASSELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHSGFSVFAG 176

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL
Sbjct: 177 VGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVL 236

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 237 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 294

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKL 372
            V  D+  DP   +  + LD  +VLNRS+AE G YP VDPL S SR  D     D   ++
Sbjct: 295 YVPADDLTDPSPATTFAHLDATVVLNRSIAELGIYPAVDPLDSTSRQLDPLVVGDEHYEI 354

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 355 ARAVQGTLQRYKELKDIIAILGMDELSEED-KQTVARARKIQRFLSQP 401


>gi|194267368|gb|ACF35670.1| ATP synthase beta subunit [Catalepidia heyana]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|194267354|gb|ACF35663.1| ATP synthase beta subunit [Bleasdalea bleasdalei]
 gi|194267375|gb|ACF35673.1| ATP synthase beta subunit [Macadamia tetraphylla]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|115564927|emb|CAJ70616.1| ATP synthase beta subunit [Trichocladus crinitus]
          Length = 466

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|56675681|emb|CAB63705.2| atp synthase beta subunit [Stanleya pinnata]
          Length = 499

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6467950|gb|AAF13249.1|AF197616_1 ATPase beta subunit [Acorus gramineus]
          Length = 491

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEEKIEESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|21633385|gb|AAM52167.1| ATP synthase beta subunit [Falkia repens]
          Length = 466

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 183/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V QG+ +    +V ++  +  V    +   + +
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRETKVTCEVQQLLGNNRVRAVAMSDTDGL 60

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V   G    +       GR+ N LG+P+D    +    LS  I    P  +    
Sbjct: 61  TRGMGVIDMGAPISVPVGGSTLGRIFNVLGEPVDNLGPVDPTTLS-PIHRSAPAFVQLDT 119

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 120 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 179

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 180 RTREGNDLYMEMKESGVINEENIAQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 239

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 240 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 298 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|89898927|ref|YP_521398.1| F0F1 ATP synthase subunit beta [Rhodoferax ferrireducens T118]
 gi|118573732|sp|Q223D6|ATPB1_RHOFD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|89343664|gb|ABD67867.1| ATP synthase F1, beta subunit [Rhodoferax ferrireducens T118]
          Length = 474

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/423 (27%), Positives = 188/423 (44%), Gaps = 18/423 (4%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           +A+D   N  VQG  +  I +V        Q   + D +  +G       Q  ++   IV
Sbjct: 1   MAQDTQTNTAVQGKIVQCIGAVVDVEFPRDQMPKIYDALKLEGSALTLEVQ-QQLGDGIV 59

Query: 71  YICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +G  + +  G +V +      +       GR+++ LG PID    +   +    I 
Sbjct: 60  RTIALGSSDGLRRGLMVSNTANPIMVPVGTATLGRIMDVLGTPIDERGPVS-TEKYASIH 118

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
            K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +     
Sbjct: 119 RKAPTYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 178

Query: 190 V---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTA 238
               + + VGER RE  +F  +               K  +V    +E P  R    LT 
Sbjct: 179 SGLSVFAGVGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTG 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ RL ERI 
Sbjct: 239 LTIAESFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI- 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S S
Sbjct: 298 -TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTS 356

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R  D      D  +   ++   + R++E RDI  I G    +       V +   I  FL
Sbjct: 357 RQLDPNVVGQDHYETARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLTVARARKIQRFL 415

Query: 418 KQS 420
            Q 
Sbjct: 416 SQP 418


>gi|32815641|gb|AAP88217.1| ATP synthase beta subunit [Casuarina equisetifolia]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|7620551|gb|AAF64662.1| F1 ATPase alpha subunit [Araucaria heterophylla]
          Length = 413

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/407 (22%), Positives = 161/407 (39%), Gaps = 23/407 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G  + +    V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENANVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L +G     + +K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKVLLGRVVDALGVPIDGKGAL-QGAERRRVEAKAPGIIERKSVHEPLQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----------STLLSMFARSDCFDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK                +   S      +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRSHGLKGTSADSVYRVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++        + S++  AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILSEAAALEYSIINAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R++A      P    +P  V     RL ER      +   G++TA+  + 
Sbjct: 236 DDLSKQAVAYRQMALLLRRPPGREAFPGDVSYSHSRLSERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICPETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           S    + ++ E   +         +D      +++   + +  KQ  
Sbjct: 356 SSKPELAQYRE---VAASAQSGSDLDAATQALLNRGARLTEVPKQPQ 399


>gi|57868938|gb|AAW57465.1| ATP synthase beta subunit [Acanthogilia gloriosa]
          Length = 494

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYTEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|192910868|gb|ACF06542.1| ATP synthase beta subunit [Elaeis guineensis]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|130076704|gb|ABO31972.1| ATPase alpha subunit [Peridiscus lucidus]
          Length = 377

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 155/381 (40%), Gaps = 20/381 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++ALG P DG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDALGVPNDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMSSRATSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + SV+V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANALEYSVLVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R++       P    +P  VF    RLLER      +   G++TA+  
Sbjct: 236 IYDDLSKQAVAYRQMPLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIG 393
                  + ++ E       G
Sbjct: 356 CGRSKLELAQYREVAAFAQFG 376


>gi|305671659|gb|ADM63139.1| ATP synthase beta subunit [Tetraplasandra oahuensis]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|229002328|dbj|BAH57927.1| ATP synthase beta subunit [Stuckenia pectinata]
          Length = 491

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGNMPNIYNALVV---KGRDTVGQQISVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 78  AMSATDGLTRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|183206686|gb|ACC54541.1| ATP synthase beta subunit [Campanula jacquinii]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  DNLGQ I +  ++        V   
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPYIYNALVV---KGRDNLGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|194267348|gb|ACF35660.1| ATP synthase beta subunit [Sleumerodendron austrocaledonicum]
 gi|194267352|gb|ACF35662.1| ATP synthase beta subunit [Kermadecia pronyensis]
          Length = 479

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|291456005|ref|ZP_06595395.1| ATP synthase F1, alpha subunit [Bifidobacterium breve DSM 20213]
 gi|45593078|gb|AAS68123.1| ATP synthase alpha subunit [Bifidobacterium breve UCC2003]
 gi|291382414|gb|EFE89932.1| ATP synthase F1, alpha subunit [Bifidobacterium breve DSM 20213]
          Length = 543

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 93/421 (22%), Positives = 173/421 (41%), Gaps = 21/421 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + GY+++       VT L       + +  +      LG    ++   + +  +G    I
Sbjct: 31  EVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAFNLDAREIGVVILGDFAGI 86

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV++ LG PIDG   +   +    + ++ P  M+R  
Sbjct: 87  EEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPIDGLGEIQGIEGRRILEAQAPDVMHRHP 146

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++   TG++ ID  TP+  GQR  +      GK      T+++  A  +  D     + 
Sbjct: 147 VDEPLSTGLKAIDAMTPVGRGQRQLIIGDRQTGKTAIAIDTIINQKANWESGDPKKQVRC 206

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +    +          + +V + + +S   + +AP T   I +++   G
Sbjct: 207 IYVAIGQKGSTIASVKQSLEDAGAMEYTTIVASPAADSAGFKYIAPYTGSAIGQHWMYNG 266

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G++
Sbjct: 267 KHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKVSDDLGGGSM 326

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  V    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A + 
Sbjct: 327 TGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAQTK 386

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             KK+  +L   + ++       +   +   +D      + +   + + LKQ      S 
Sbjct: 387 ALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLTRGAHLTELLKQPQFHPYSM 443

Query: 428 D 428
           +
Sbjct: 444 E 444


>gi|37545708|gb|AAM97786.1| ATP synthase beta subunit [Tricoryne sp. Chase 2220]
          Length = 467

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G+++D  GQ I +  ++        V    
Sbjct: 4   GHIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTD--GQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D   S+     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGSVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|24940174|emb|CAD43371.1| ATP synthase beta subunit [Cystostemon heliocharis]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRVVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850926|gb|AAC72155.1| ATP synthase beta subunit [Isopogon buxifolius]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAXRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|158518590|sp|Q4VZI5|ATPB_CUCSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|74027108|gb|AAZ94658.1| ATPase beta subunit [Cucumis sativus]
 gi|115432811|gb|ABI97424.1| ATP synthase CF1 beta subunit [Cucumis sativus]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DISGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVVDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085122|gb|AAX62967.1| ATP synthase beta subunit [Dalechampia spathulata]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTC-ATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|77462850|ref|YP_352354.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides 2.4.1]
 gi|126461743|ref|YP_001042857.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17029]
 gi|221638720|ref|YP_002524982.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides KD131]
 gi|332557741|ref|ZP_08412063.1| F0F1 ATP synthase subunit beta' [Rhodobacter sphaeroides WS8N]
 gi|118573736|sp|Q3J431|ATPB1_RHOS4 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|190358214|sp|A3PIB9|ATPB1_RHOS1 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|77387268|gb|ABA78453.1| F1-ATP synthase beta subunit [Rhodobacter sphaeroides 2.4.1]
 gi|126103407|gb|ABN76085.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17029]
 gi|221159501|gb|ACM00481.1| ATP synthase subunit beta [Rhodobacter sphaeroides KD131]
 gi|332275453|gb|EGJ20768.1| F0F1 ATP synthase subunit beta' [Rhodobacter sphaeroides WS8N]
          Length = 475

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/420 (25%), Positives = 185/420 (44%), Gaps = 20/420 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G ++ +      V        + + +  +      + +V   +    V    +   E
Sbjct: 4   ASQGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATE 63

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR++N +G+PID    LG+   +  I    P    +
Sbjct: 64  GLVRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEA-STRAIHQPAPTFAEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 123 STTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGV 182

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +   + +             K  +V    +E P  R    LT +T+AE F  
Sbjct: 183 GERTREGNDLYHEMIESGVIKIDNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRD 242

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+
Sbjct: 243 QSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGS 300

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D    
Sbjct: 301 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIV 360

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   +  ++  ++ R++  +DI  I G     +     +V +   I  FL Q P D++
Sbjct: 361 GEEHYNVARAVQGILQRYKSLQDIIAILGMDELSEED-KLSVARARKIQRFLSQ-PFDVA 418


>gi|332995860|gb|AEF05915.1| F0F1 ATP synthase subunit beta [Alteromonas sp. SN2]
          Length = 461

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 187/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGD--FVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           +  G +  I      +      V  + D   V   G +   L    ++   +V    +G 
Sbjct: 1   MSQGKVVQIIGAVVDIEFPQTAVPRVYDALRVTEGGLSGLTLEVQQQLGGGVVRSIALGS 60

Query: 78  GEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V +      +       GR+++ LG PID    +G+ D  M I    P   
Sbjct: 61  TDGLQRGLAVENTENPIMVPVGTATLGRIMDVLGNPIDEAGPIGEED-RMSIHRAAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 DQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 VARGVQTVLQRYKELKDIIAILGMDELSEED-KQVVSRARKIQRFLSQP 405


>gi|323715444|gb|ADY04790.1| ATP synthase beta subunit [Curtisia dentata]
          Length = 474

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|313183924|ref|YP_004021778.1| ATP synthase CF1 beta subunit [Equisetum arvense]
 gi|281371644|gb|ADA63577.1| ATP synthase CF1 beta subunit [Equisetum arvense]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V   + +   + + +V +G+N    GQ I +  ++        V    
Sbjct: 15  GYITQIIGPVLDVAFPVGKMPNIFNSLVVKGQNPA--GQNINVTCEVQQLLGNNKVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +      I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNMGPV-EATTKSPIHKPAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFMELETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYTEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPWIVGEEHYEVAQGVKQTLQRYKELQDIIAILGLDELSEQD-RLLVARARKIERFLSQP 428


>gi|229002282|dbj|BAH57918.1| ATP synthase beta subunit [Potamogeton crispus]
          Length = 491

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V      +  + + +V +G+++D  G+ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGNMPNIYNALVVKGRDTD--GEQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLRRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|195183531|dbj|BAG66978.1| ATP synthase beta subunit [Rinorea apiculata]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|194267346|gb|ACF35659.1| ATP synthase beta subunit [Euplassa inaequalis]
          Length = 445

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINKQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|8439470|emb|CAB89934.1| ATP synthase beta subunit [Melianthus major]
          Length = 484

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|14718085|gb|AAK72783.1| ATP synthase beta subunit [Idesia polycarpa]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GHIAQIIGPVLDVAFPPGRMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|62184042|gb|AAX73332.1| ATP synthase beta subunit [Banksia oblongifolia]
          Length = 494

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085103|gb|AAX62958.1| ATP synthase beta subunit [Byrsonima crassifolia]
          Length = 487

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|11467199|ref|NP_043032.1| ATP synthase CF1 beta subunit [Zea mays]
 gi|114551|sp|P00827|ATPB_MAIZE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|552732|gb|AAA85356.1| coupling factor beta-subunit [Zea mays]
 gi|902229|emb|CAA60293.1| ATPase beta subunit [Zea mays]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      +T    +   + + ++ + +++     +   +V ++  +  V    
Sbjct: 19  SVGRIDQIIGPVLDITFPPGKLPYIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATEGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|183206562|gb|ACC54479.1| ATP synthase beta subunit [Campanula mirabilis]
          Length = 475

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 118/420 (28%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 7   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 65  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|156530167|gb|ABU75180.1| AtpB [Quassia africana]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVD-TRTTSPIHKPAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|139389271|ref|YP_001123037.1| ATPase beta subunit [Aethionema grandiflorum]
 gi|190358250|sp|A4QJK6|ATPB_AETGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286233|dbj|BAF49861.1| ATPase beta subunit [Aethionema grandiflorum]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917376|dbj|BAF40487.1| ATP synthase beta subunit [Bunchosia hookeriana]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMQVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718175|gb|AAK72826.1| ATP synthase beta subunit [Philydrella pygmaea]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62902839|gb|AAY19334.1| ATP synthase beta subunit [Quetzalia occidentalis]
          Length = 480

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 4   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGNQINVVCEVQQLLGNNQVRAVAMS 63

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P  
Sbjct: 64  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAPAF 122

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 123 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 182

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 183 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 242

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 243 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 300

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 301 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 360

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|62085143|gb|AAX62977.1| ATP synthase beta subunit [Spathiostemon javensis]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|62085093|gb|AAX62953.1| ATP synthase beta subunit [Aporusa frutescens]
          Length = 475

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|46116940|ref|XP_384488.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor
           [Gibberella zeae PH-1]
          Length = 513

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/448 (25%), Positives = 188/448 (41%), Gaps = 21/448 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLS-QYVCLGDFVVHQGKNSDNLGQV 62
               L         +  V  G I  +      V     +   + + +  Q      + +V
Sbjct: 24  RPSALRLPISSRWASTGVGAGKIHQVIGAVVDVKFDGAKLPAILNSLECQNNGQKLVLEV 83

Query: 63  -IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
              +   +V    +   E +  G  V   G    I       GR++N  G PID    + 
Sbjct: 84  SQHLGESVVRCIAMDGTEGLVRGATVQDTGAPITIPVGPATLGRIMNVTGDPIDERGPI- 142

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           K D  + I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +  
Sbjct: 143 KTDKRLPIHTEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQE 202

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILR 231
              +        S+   VGER RE  +   +         D   K  +V    +E P  R
Sbjct: 203 LINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGAR 262

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  ++
Sbjct: 263 ARVALTGLTVAEYFRDAEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDM 322

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP 
Sbjct: 323 GGMQERI--TTTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPA 380

Query: 351 VDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+ D      +     + +  ++  ++  +DI  I G     +      V +
Sbjct: 381 VDPLDSKSRMLDPRVVGQEHYDTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVER 439

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              I  FL Q     +   VF  I  KL
Sbjct: 440 ARKIQRFLSQP---FTVAQVFTGIEGKL 464


>gi|303256393|ref|ZP_07342407.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47]
 gi|331001480|ref|ZP_08325098.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT
           11859]
 gi|302859884|gb|EFL82961.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47]
 gi|329568209|gb|EGG50026.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT
           11859]
          Length = 467

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 182/411 (44%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQ-------VIRINLDIVYICPV 75
           G I  +      +     +   + D +V +   ++ L +         ++   +V    +
Sbjct: 4   GKIVQVIGAVVDIEFPRDEMPKVYDALVLEKDENNKLAEEGLTFEVQQQLGDGVVRTIAM 63

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  E +  G  V   G    +       GR+++ LG+P+D    +G+ +  M I    P 
Sbjct: 64  GSSEGLQRGMAVKALGHGIMVPVGPKTLGRIMDVLGRPVDEAGEIGE-EKRMPIHRAAPK 122

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                      +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 123 FDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAYGGYSV 182

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 183 FAGVGERTREGNDFYHEMGESKVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGR 242

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           ++LL +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI     + G+IT++
Sbjct: 243 DILLFIDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERIA--STKVGSITSI 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 301 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPHIIGEEH 360

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           AV +   I  FL Q 
Sbjct: 361 YSVTRRVQATLQRYKELRDIIAILGMDELS-PEDKLAVTRARKIQRFLSQP 410


>gi|228017559|gb|ACP52373.1| ATP synthase CF1 alpha subunit [Pinus parviflora var. pentaphylla]
          Length = 507

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/424 (23%), Positives = 173/424 (40%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G G  I  G  V   G+  +I  S  + GRV+NAL             +
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAQIPVSDAYLGRVVNALXXXXXXXXXXXXSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +     VI     +G+R   V + +  +        ++VV  T+D    L+ +AP T   
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLAPYTGAA 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I L+  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGIRPAINVGLSVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|222084181|ref|YP_002519775.1| ATP synthase CF1 beta chain [Gnetum parvifolium]
 gi|220983518|dbj|BAH11286.1| ATP synthase CF1 beta chain [Gnetum parvifolium]
          Length = 485

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 184/417 (44%), Gaps = 24/417 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDN----LGQVIRINLDI-VYICPVGI 77
           G I+ I      V+        + + ++ +G+  D       +V ++  +  V    +  
Sbjct: 21  GQITQIIGPVLDVSFPPGNLPNIYNSLIVKGQKDDRAFSVTCEVQQLLGNNTVRAVAMSA 80

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + ++ G  V + G    +       GR+ N LG+P+D    +   D +  I    P   
Sbjct: 81  TDGLTRGMKVINTGACLSVPVGKATLGRIFNVLGEPVDNLGPVD-TDTTFPIHRPAPAFP 139

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 140 QLDTNLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 199

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+ +AEYF
Sbjct: 200 GVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALAMAEYF 259

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +K
Sbjct: 260 RDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKK 317

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 318 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPE 377

Query: 365 WSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 IVGEQHYEIAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|22651726|gb|AAM26935.1| ATP synthase beta subunit [Drosera adelae]
          Length = 487

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      VT  S  +  + + ++ +G   D LGQ I +  ++        V    
Sbjct: 13  GRISQIIGPVLDVTFPSGKMPYIYNALIVKG--RDTLGQPINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V   G    +   +   GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATNGLMRGMEVVDTGAALSVPVGSVTLGRIFNVLGQPIDNLGPV-ATPTTSPIHRSPP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +  +     F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +         
Sbjct: 130 DFIQLETRLSIFETGIKVVDLLAPYRRGGKTGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFAGVGERTREGNDLYKEMKESGVINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPKIVGDEHYETAQQVKQTLQRYKEVQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|254463430|ref|ZP_05076846.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium HTCC2083]
 gi|206680019|gb|EDZ44506.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium HTCC2083]
          Length = 474

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/422 (26%), Positives = 187/422 (44%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V        + + +  Q +    + +V   +  + V    +  
Sbjct: 1   MANAVGKITQVIGAVVDVQFEDNLPEILNALETQNQGKTLVLEVAQHLGENTVRTIAMDG 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V + G +  +       GR++N  G P+D    +   D    I    P   
Sbjct: 61  SEGLVRGQEVTNTGNQISVPVGTATLGRIMNVTGDPVDEQGPV-AADARRPIHGDAPTFE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 QQSTATEILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGVSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +             K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMIESGVIVPDNLPDSKIALVYGQMNEPPGARMRVALTGLTLAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  S  + 
Sbjct: 240 RDDTGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--SSTKN 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D  
Sbjct: 298 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPL 357

Query: 365 WSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              D   K+ + +  ++ R++  +DI  I G     +     AV +   +  FL Q P D
Sbjct: 358 IIGDEHYKVATDVQQVLQRYKSLQDIIAILGMDELSEED-KLAVARARKLERFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|75328430|sp|Q85V27|ATPB_BRIAM RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351931|emb|CAD48413.1| ATP synthase beta subunit [Brimeura amethystina]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I         +  + V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVICEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14717980|gb|AAK72732.1| ATP synthase beta subunit [Caiophora acuminata]
          Length = 483

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|319409367|emb|CBI83011.1| ATP synthase beta chain [Bartonella schoenbuchensis R1]
          Length = 536

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/456 (24%), Positives = 203/456 (44%), Gaps = 30/456 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG--GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           NL   +  +   SK +  +G  G I  +      V    +   + + +  +   +  + +
Sbjct: 41  NLARTSSKSVSASKPVRGKGSVGEIRQVIGAVVDVQFEGELPNILNALETENMGNRLVLE 100

Query: 62  V-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           V   +  + V    +   + +  G  VF  G +  +       GR++N +G+P+D    +
Sbjct: 101 VAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQICVPVGEATLGRIMNVVGEPVDNAGPI 160

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +  I  + P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+ 
Sbjct: 161 IATK-TRSIHQEAPEYVEQSTESEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIM 219

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVAT 223
               +         + + VGER RE  +   + +   +              K  +V   
Sbjct: 220 ELINNVAKAHGGYSVFAGVGERTREGNDLYYEMIESRVNVNPKDNKGSAAGSKCALVYGQ 279

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
            +E P  R    L+ +T+AE F  +G +VL  +D++ RF  +  E++   G +P A GY 
Sbjct: 280 MNEPPGARARVALSGLTVAESFRDEGQDVLFFVDNMFRFTQAGSEVSALLGRIPSAVGYQ 339

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            ++ +E+  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R++A
Sbjct: 340 PTLATEMGALQERI--TSTKTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAIA 397

Query: 344 EEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           E+G YP VDPL S SR+ D      +   +   +  ++ R++  +DI  I G     +  
Sbjct: 398 EKGIYPAVDPLDSSSRMLDPMVVGEEHYAVACQVQTILQRYKSLQDIIAILGMDELSEE- 456

Query: 403 LDKA-VHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            DKA V +   I  FL Q        +VF     KL
Sbjct: 457 -DKALVGRARKIERFLSQP---FHVAEVFTGSPGKL 488


>gi|257454338|ref|ZP_05619601.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60]
 gi|257448241|gb|EEV23221.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60]
          Length = 466

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V    Q V  + D +  +G  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFDRQSVPRIYDALKVEGTETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG+PID    + +   +  I  + P    +
Sbjct: 60  GLKRGLPVSNTGAPISVPVGKGTLGRIMDVLGRPIDEAGPV-EHSNTWAIHREAPSYDEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D      
Sbjct: 297 SVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGE 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +  ++ RF+E +DI  I G     +      V++   I  FL Q 
Sbjct: 357 EHYAVARGVQEVLQRFKELKDIIAILGMDELSEDD-KLVVYRARKIQRFLSQP 408


>gi|194367283|ref|YP_002029893.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia
           R551-3]
 gi|226740679|sp|B4SJR9|ATPB_STRM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194350087|gb|ACF53210.1| ATP synthase F1, beta subunit [Stenotrophomonas maltophilia R551-3]
          Length = 468

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 188/414 (45%), Gaps = 20/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V    + V  + D +  +  N++   +V + +   +V    +G  
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRESVPKVYDALKVE--NTEITLEVQQQLGDGVVRCIALGST 58

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +    +  + GR   +   A   GR+++ LG+PID    +   D S EI    P   +
Sbjct: 59  DGLKRNLVAVNTGRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRDAPSYED 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + 
Sbjct: 118 QSPATELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D   
Sbjct: 178 VGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENG 237

Query: 254 ------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
                 L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 238 KGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  + L+RS+A  G YP VDPL S SR  D     
Sbjct: 296 TSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIG 355

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +       +   + +++E +DI  I G     +    +AV +   I  F  Q 
Sbjct: 356 HEHYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQAVSRARKIERFFSQP 408


>gi|118917352|dbj|BAF40462.1| ATP synthase beta subunit [Romanoa tamnoides]
 gi|155029291|dbj|BAF75526.1| ATP synthase beta subunit [Acidoton urens]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|5758912|gb|AAD50886.1| ATP synthase beta subunit [Ledebouria socialis]
          Length = 496

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62184078|gb|AAX73350.1| ATP synthase beta subunit [Hakea victoria]
          Length = 497

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|319954479|ref|YP_004165746.1| ATP synthase f1 subcomplex alpha subunit [Cellulophaga algicola DSM
           14237]
 gi|319423139|gb|ADV50248.1| ATP synthase F1 subcomplex alpha subunit [Cellulophaga algicola DSM
           14237]
          Length = 509

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/436 (25%), Positives = 193/436 (44%), Gaps = 17/436 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
              LA+  +D+   L   + G ++S+++    V+ L   V   + +   G   +  G   
Sbjct: 14  FNELAKHTKDHEFKLAPKEVGRVTSVSAGVVKVSGL-PNVGYEELLKFPG---NLYGIAF 69

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  D +    +G   +++ GDLV    R   +       GRVI  LG+P+D   ++   
Sbjct: 70  SIEEDEIGTILLGEDSDLNAGDLVERTNRVMDVPVGKALLGRVIGPLGQPMDEKGAISY- 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
           +  + I     P M+R  V    +TGI+VID   P+  GQR  +      GK+ +   ++
Sbjct: 129 EKRLPIERSATPIMDRSGVSIPLQTGIKVIDALIPIGRGQRELILGDRQTGKTAIALDTI 188

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATS-DESPILRKMAPLTAV 239
             + D     +   +G+R   V + + D   +   +  +V+ T  ++SP L+ +AP  A 
Sbjct: 189 VNQKDKDVICVYCAIGQRASAVAKVVADLKENGAMEYTIVMVTEGNDSPGLQYIAPYAAT 248

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAEYF  KG +VL++ D +T  A + RE++      P    +P  +F    RLLER   
Sbjct: 249 SIAEYFMQKGKDVLIVYDDLTNHARAYRELSLLLKRPPGREAFPGDIFYIHSRLLERSTH 308

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  +  +  N +  I  ++ SI DG I L+    E G  P V+   SV
Sbjct: 309 LSDELGGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPKQFELGILPAVEVGKSV 368

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  KA     + +   L     +FEE       G +   +D      +     I + L
Sbjct: 369 SRVGGKAQLPAYRAIAGDLKLGFSQFEELETFARFGSH---LDEETKSVIEHGKRIREIL 425

Query: 418 KQSPSDLSSEDVFQEI 433
           KQ  ++L      ++I
Sbjct: 426 KQ--NELQPLSALEQI 439


>gi|290490158|gb|ADD31486.1| ATP synthase CF1 beta subunit protein [Nerium oleander]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        +    
Sbjct: 21  GRIVQIIGPVLDVAFAPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRIRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|224179490|ref|YP_002601016.1| CF1 beta subunit of ATP synthase [Monomastix sp. OKE-1]
 gi|217314533|gb|ACK36876.1| CF1 beta subunit of ATP synthase [Monomastix sp. OKE-1]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/423 (27%), Positives = 187/423 (44%), Gaps = 25/423 (5%)

Query: 20  VVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYI 72
           V   G I+ I   V   V        + + +V +GKN          +V ++  D  V  
Sbjct: 5   VKNEGRITQIIGPVMDVVFSSGNIPNIYNALVVEGKNEAGDDLKITAEVQQLLGDNKVRA 64

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMS 130
             +   +    G  V   G    +       GR+ N LG+P+D    +  G + ++ I  
Sbjct: 65  VALSATDGSMRGMKVIDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVSTGKVKTLPIHR 124

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 125 TAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 184

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 185 GVSVFGGVGERTREGNDLYMEMKESKVINTDKMSESKVALVYGQMNEPPGARMRVGLTAL 244

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 245 TMAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 303

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S
Sbjct: 304 -TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTS 362

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        D  K   S+   + R++E +DI  I G     +      V +   +  FL
Sbjct: 363 TMLQPWIVGDDHYKAAQSVKRTLQRYKELQDIIAILGLDELSEDD-RLTVARARKVERFL 421

Query: 418 KQS 420
            Q 
Sbjct: 422 SQP 424


>gi|195468864|dbj|BAG66966.1| ATP synthase beta subunit [Hybanthus enneaspermus]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119367972|dbj|BAF40453.1| ATP synthase beta subunit [Dalechampia spathulata]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTC-ATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61968305|gb|AAX57079.1| ATP synthase beta subunit [Richeria grandis]
          Length = 479

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|61968199|gb|AAX57026.1| ATP synthase beta subunit [Actephila lindleyi]
          Length = 479

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 69  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTHTTS-PIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|14718236|gb|AAK72856.1| ATP synthase beta subunit [Sullivantia oregana]
          Length = 483

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLRRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|330505858|ref|YP_004382727.1| F0F1 ATP synthase subunit alpha [Pseudomonas mendocina NK-01]
 gi|328920144|gb|AEB60975.1| F0F1 ATP synthase subunit alpha [Pseudomonas mendocina NK-01]
          Length = 514

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 97/442 (21%), Positives = 181/442 (40%), Gaps = 30/442 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +   + L         G I S++     +  L+  V  G+ +       
Sbjct: 3   QLNPSEISEIIKGRIEKLDVASQARNEGTIVSVSDGIVRIYGLAD-VMYGEMIEFPDG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G    ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -VYGMALNLEQDSVGAVVLGAYTSLAEGMSAKCTGRILEVPVGPELLGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +     +  +    P  + R+ V++  +TG + +D   P+  GQR  +     IGK+
Sbjct: 119 KGPIN-AQATDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            L      +  +   K +   +G++   +   +           ++VV A++ ES  L+ 
Sbjct: 178 ALAVDAIINQKNSGIKCVYVAIGQKQSTIANVVRKLEETGALANTIVVAASASESAALQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER     +E              G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            ++   G  P V+   SVSR+   A +   KKL   +   + ++ E   +     +   +
Sbjct: 358 SAMFNSGIRPAVNAGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D    K +     + + +KQ  
Sbjct: 415 DEATRKQLEHGQRVTELMKQKQ 436


>gi|323715480|gb|ADY04808.1| ATP synthase beta subunit [Philadelphus mexicanus]
          Length = 484

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 8   GRITQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|315635259|ref|ZP_07890536.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC
           33393]
 gi|315476005|gb|EFU66760.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC
           33393]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 185/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALNVETGLTLEVQQQLG--GGVVRCIALGASD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +     ++       GR++N LG PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNDPIQVPVGTKTLGRIMNVLGDPIDEQGPIGEEE-RWSIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|313183829|ref|YP_004021672.1| ATP synthase CF1 beta subunit [Prunus persica]
 gi|309321441|gb|ADO64982.1| ATP synthase CF1 beta subunit [Prunus persica]
          Length = 492

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDAVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|139388101|ref|YP_001123293.1| ATPase beta subunit [Barbarea verna]
 gi|190358259|sp|A4QKB2|ATPB_BARVE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286492|dbj|BAF50117.1| ATPase beta subunit [Barbarea verna]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917406|dbj|BAF40511.1| ATP synthase beta subunit [Phyllanthus flexuosus]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|115564941|emb|CAJ70598.1| ATP synthase beta subunit [Parrotia persica]
          Length = 469

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|34539405|gb|AAQ74586.1| F1-ATPase alpha subunit [Philesia magellanica]
          Length = 390

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/389 (22%), Positives = 155/389 (39%), Gaps = 22/389 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G    +  + V I   G    I  GDLV   G     P      GR
Sbjct: 9   GEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 66  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 125 LIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 184

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 185 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     +    I  +V  
Sbjct: 245 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVAAYIPTNVIP 304

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 305 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
               +   +D       ++   + +  KQ
Sbjct: 362 AFAQFGSDLDAATQALPNRGARLTEVPKQ 390


>gi|24940248|emb|CAD43382.1| ATP synthase beta subunit [Nonea versicolor]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|20269434|gb|AAM17944.1| ATP synthase beta subunit [Planchonella obovata]
          Length = 470

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 6   GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGKPINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|114565195|ref|YP_752709.1| F0F1 ATP synthase subunit beta [Shewanella frigidimarina NCIMB 400]
 gi|122298241|sp|Q07VU4|ATPB1_SHEFN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|114336488|gb|ABI73870.1| ATP synthase F1, beta subunit [Shewanella frigidimarina NCIMB 400]
          Length = 463

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 189/411 (45%), Gaps = 16/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G +  +      V      V  + D +   G+ + N G V+     +   +V    +
Sbjct: 1   MSTGTVVQVIGAVVDVEFPQDSVPRVYDALKITGEGACN-GLVLEVQQQLGGGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + G    +       GR++N LG+PID    +G+ +    I    P 
Sbjct: 60  GSSDGLRRGLEVANSGSPITVPVGVATLGRIMNVLGEPIDEAGPIGEEE-RYVIHRAAPS 118

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 119 YEDQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 178

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +     +  K  +V    +E P  R    LT ++IAE F  +G 
Sbjct: 179 FAGVGERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLSIAEKFRDEGR 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V
Sbjct: 239 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 357 YDVANGVQTVLQRYKELKDIIAILGMDELSDDD-KTMVFRARKIERFLSQP 406


>gi|326909400|ref|YP_004327669.1| ATP synthase CF1 beta subunit [Hevea brasiliensis]
 gi|308523514|gb|ADO33564.1| ATP synthase CF1 beta subunit [Hevea brasiliensis]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|268609605|ref|ZP_06143332.1| F0F1 ATP synthase subunit beta [Ruminococcus flavefaciens FD-1]
          Length = 463

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/409 (28%), Positives = 193/409 (47%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIG 78
           ++ G I+ +      V     +   + D +  +      + +V +   + IV    +   
Sbjct: 1   MEKGKITQVIGPVIDVEFANGKLPMIRDALTVEVDGKQRVMEVAQHMGNHIVRCIMLATS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +S    V   G   ++       GR+ N LG+PID    +G  D   EI  K P   +
Sbjct: 61  EGLSKNMEVTATGSCIKVPVGEKTLGRMFNVLGEPIDKQGDVG-TDERWEIHRKAPTFQD 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +  V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   
Sbjct: 120 QSPVVEVLETGIKVIDLIAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNV 252
           VGER RE  +   +      + K+ +V    +E P  R     T +T+AEYF   +  +V
Sbjct: 180 VGERSREGNDLWNEMQESGVIAKTALVFGQMNEPPGSRMRVAQTGLTMAEYFRDCEHKDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 240 LLFIDNIFRYVQAGSEVSALLGRMPSAVGYQPTLATEVGELQERI--TSTKNGSITSVQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP      + LD   VL+R + E+G YP VDPL S SR+ +      +   
Sbjct: 298 VYVPADDLTDPAPAITFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEPEIVGEEHYN 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      L+ +++E +DI  I G    +D     AV++   I  FL Q 
Sbjct: 358 VARRTQELLQKYKELQDIIAILGMEE-LDEEDKLAVYRARKIQKFLSQP 405


>gi|32189394|ref|NP_001677.2| ATP synthase subunit beta, mitochondrial precursor [Homo sapiens]
 gi|114549|sp|P06576|ATPB_HUMAN RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|179281|gb|AAA51809.1| ATP synthase beta subunit precursor [Homo sapiens]
 gi|16741373|gb|AAH16512.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Homo sapiens]
 gi|119617358|gb|EAW96952.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Homo sapiens]
 gi|123981364|gb|ABM82511.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [synthetic construct]
 gi|123996207|gb|ABM85705.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [synthetic construct]
 gi|158255606|dbj|BAF83774.1| unnamed protein product [Homo sapiens]
 gi|224487773|dbj|BAH24121.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [synthetic construct]
          Length = 529

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|323715484|gb|ADY04810.1| ATP synthase beta subunit [Whipplea modesta]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLNVARARKIERFLSQP 426


>gi|226441959|gb|ACO57569.1| F1 ATP synthase beta subunit [Gillichthys mirabilis]
          Length = 505

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/412 (26%), Positives = 188/412 (45%), Gaps = 18/412 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +  +G++S  + +V   +    V    +   E +
Sbjct: 37  SGRIVAVIGAVVDVQFDEGLPPILNALEVKGRDSRLVLEVAQHLGESTVRTIAMDGTEGL 96

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +     +  I ++ P   +   
Sbjct: 97  VRGQQVLDTGAPIRIPVGPETLGRIMNVIGEPIDERGPIS-TKQTAPIHAEAPEFTDMSV 155

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 156 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 215

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 216 RTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 275

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 276 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 333

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 334 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAE 393

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 394 HYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 444


>gi|139389103|ref|YP_001123821.1| ATP synthase CF1 beta subunit [Nasturtium officinale]
 gi|190358687|sp|A4QLU0|ATPB_NASOF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134287026|dbj|BAF50645.1| ATPase beta subunit [Nasturtium officinale]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGSPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|139387259|ref|YP_001123380.1| ATP synthase CF1 beta subunit [Capsella bursa-pastoris]
 gi|190358274|sp|A4QKJ9|ATPB_CAPBU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286580|dbj|BAF50204.1| ATPase beta subunit [Capsella bursa-pastoris]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G+   +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGKPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYDTAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|99640676|emb|CAJ45106.1| putative beta subunit of chloroplast ATP synthase [Marsilea mutica]
          Length = 493

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/433 (25%), Positives = 190/433 (43%), Gaps = 25/433 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQV 62
           + L+ + SK +    GYI+ I      V     +   + + ++ +G+N      +   +V
Sbjct: 4   SSLSFEISKLVENNVGYITQIIGPVLDVAFSPGKMPNIYNSLIVKGRNPADQEINVTCEV 63

Query: 63  IRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D    + 
Sbjct: 64  QQLLGNNEVRAVAMSATDGLMRGMSVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNMGPV- 122

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +   +  I    P           F+TGI+V+D+  P   G +IG F G+G+GK+ L+  
Sbjct: 123 ESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIME 182

Query: 181 FARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPI 229
              +       +S+ G   ER RE  +   +               K  +V    +E P 
Sbjct: 183 LINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPG 242

Query: 230 LRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 243 ARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLST 302

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G Y
Sbjct: 303 EMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIY 360

Query: 349 PPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P VDPL S S +        +  +    +   + R++E +DI  I G     +      V
Sbjct: 361 PAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTV 419

Query: 408 HQVPIIYDFLKQS 420
            +   I  FL Q 
Sbjct: 420 ARARKIERFLSQP 432


>gi|75328429|sp|Q85V26|ATPB_HYANO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351933|emb|CAD48414.1| ATP synthase beta subunit [Hyacinthoides non-scripta]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I         +  + V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVICEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|75328432|sp|Q85V29|ATPB_OTHSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351927|emb|CAD48411.1| ATP synthase beta subunit [Othocallis siberica]
          Length = 495

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708165|emb|CAB90015.1| ATP synthase beta subunit [Berberidopsis corallina]
          Length = 487

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 40  KGRDTVGQPINVTCEVQXLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 219 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|24940168|emb|CAD43368.1| ATP synthase beta subunit [Cordia macrostachya]
          Length = 476

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|150035733|gb|ABR67212.1| ATP synthase beta subunit [Streptochaeta angustifolia]
          Length = 479

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVT-CLSQYVCLGDFVVHQ-----GKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V +     GK  +   +V ++  +  V    
Sbjct: 1   SAGRIDQIIGPVLDVTFSPGKLPYIYNALVVKSRDTAGKQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 357

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|186886327|gb|ACC93566.1| ATPase F1 alpha subunit [Juncus jacquinii]
          Length = 356

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 2   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 62  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 120

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 121 TAIAIDTILNQKEMNSQGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 181 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 240

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 241 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 300

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+         K++  SL   + ++ E      +G
Sbjct: 301 LFYRGIRPAINVGLSVSRVGSAGQLKTMKQVCGSLKLELAQYREVAAFAQLG 352


>gi|42559032|gb|AAS20202.1| ATP synthase beta subunit [Xyris jupicai]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/427 (26%), Positives = 186/427 (43%), Gaps = 29/427 (6%)

Query: 17  KNLVVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI------ 69
              V   G I+ I   V   V    +   + + ++ +G   D  GQ I +  ++      
Sbjct: 4   SPTVKNIGRIAQIIGPVLDVVFPPGKMPNIYNALIVKG--RDIAGQQITVTCEVQQLLGN 61

Query: 70  --VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
             V    +   E +     V   G    +       GR+ N LG+P+D    +     S 
Sbjct: 62  NRVRAVAMSATEGLMRRMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDTSTTS- 120

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +  +   + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 121 PIHRSAPAFVQLETRLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 180

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + + VGER RE  +   +               K  +V    +E P  R    
Sbjct: 181 KAHGGVSVFAGVGERTREGNDLYIEMKESGVINEKNLTKSKVALVYGQMNEPPGARMRVG 240

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 241 LTALTMAEYFRDVNNQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 300

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 301 ERI--TSTKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 358

Query: 355 ASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +   +    +  +    +   + R++E +DI  + G     +      V +   I
Sbjct: 359 DSTSTMLQLRIVGKEHYETAQRVKQTLQRYKELQDIIAVLGLDELTEED-RLTVARARKI 417

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 418 ERFLSQP 424


>gi|224830479|gb|ACN66335.1| ATP synthase beta chain [Nandina domestica]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 428


>gi|194267379|gb|ACF35675.1| ATP synthase beta subunit [Macadamia jansenii]
          Length = 480

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|124361708|gb|ABN09296.1| ATP synthase beta subunit [Diospyros mollis]
          Length = 465

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V  L  +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFLPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|119367968|dbj|BAF40444.1| ATP synthase beta subunit [Acalypha insulana]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21633345|gb|AAM52147.1| ATP synthase beta subunit [Odonellia hirtiflora]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V   S  +  + + +V QG+N   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPSGKMPYIYNALVVQGRNNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIPILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|66276281|gb|AAY44155.1| ATP synthase beta subunit [Hillebrandia sandwicensis]
          Length = 477

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/390 (27%), Positives = 172/390 (44%), Gaps = 26/390 (6%)

Query: 53  GKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCG 103
           GK  D  GQ I +  ++        V    +   + +  G  V   G    +       G
Sbjct: 29  GKGRDTXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDPGAPLSVPVGGATLG 88

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +
Sbjct: 89  RIFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 147

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN------- 213
           IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +            
Sbjct: 148 IGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNI 207

Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271
              K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++ 
Sbjct: 208 AESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSA 267

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + 
Sbjct: 268 LLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAH 325

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIR 390
           LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI 
Sbjct: 326 LDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDII 385

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            I G     +      V +   I  FL Q 
Sbjct: 386 AILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|319790625|ref|YP_004152258.1| ATP synthase F1, beta subunit [Thermovibrio ammonificans HB-1]
 gi|317115127|gb|ADU97617.1| ATP synthase F1, beta subunit [Thermovibrio ammonificans HB-1]
          Length = 481

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/375 (28%), Positives = 181/375 (48%), Gaps = 12/375 (3%)

Query: 54  KNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111
           +  D + +V   +  + V     G  E +  G  V   G   ++       GR+ N +GK
Sbjct: 47  EEGDLMLEVHQHLGENRVRCVAFGATEGLKRGMEVIDTGDYLKVPVGHATRGRIFNVVGK 106

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           PIDG   + + +    I    PP   ++ V + F+TGI+VID+  P   G + G+F G+G
Sbjct: 107 PIDGKGPV-EAEEYWPIHRPAPPLTEQKTVAEVFETGIKVIDLLEPYAKGGKTGLFGGAG 165

Query: 172 IGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
           +GK+ LL     +         + + VGER RE  +   +     + + +V+V    +E 
Sbjct: 166 VGKTVLLMELIHNVAMKHGGFSVFAGVGERTREGTDLWLEMQESGVLENTVLVYGQMNEP 225

Query: 228 PILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           P  R    +T VT+AEYF      +++  +D++ RF  +  E++   G +P   GY  ++
Sbjct: 226 PGNRWRVAMTGVTMAEYFRDVEGRDMMFFVDNMFRFIQAGAEVSALLGRIPSEVGYQPTL 285

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +E+  + ERI  +   KG+IT+V ++ V  D+  DP   ++ + LD   VL+R+LAE+G
Sbjct: 286 ATEVGAIQERI--TSTTKGSITSVQAIYVPADDFTDPAPFTLFAHLDATTVLSRALAEQG 343

Query: 347 RYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPL S SR+ D     +   ++   +   + R++E  +I  I G     +     
Sbjct: 344 IYPAVDPLESTSRMLDPHIVGERHYRVAREVQRYLQRYKELLEIIAILGMEELSEED-KL 402

Query: 406 AVHQVPIIYDFLKQS 420
            VH+   I  FL Q 
Sbjct: 403 VVHRARRIQLFLTQP 417


>gi|254483172|ref|ZP_05096405.1| ATP synthase F1, alpha subunit [marine gamma proteobacterium
           HTCC2148]
 gi|214036543|gb|EEB77217.1| ATP synthase F1, alpha subunit [marine gamma proteobacterium
           HTCC2148]
          Length = 514

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 95/447 (21%), Positives = 181/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++++ +     L         G + S+T     +  L++ V  G+ +  +G   
Sbjct: 3   QLNPSEISEIIKSRIDELDVSSEARNEGTVVSVTDGIIRIHGLAE-VMYGEMIEFEGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  + ++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -IYGMALNLERDSVGAVILGDYKSLAEGQSCRCTGRILEVPVGPELQGRVVDALGSPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +    ++  +    P  + RQ V++  + G++ +D   P+  GQR  +     IGK+
Sbjct: 119 KGPVNAA-MTDALEKVAPGVIARQSVDQPVQIGLKAVDAMVPIGRGQRELIIGDRQIGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRK 232
            +      +      K +   +G++   V   +         + ++VV AT+ +   ++ 
Sbjct: 178 AIAVDAIINQKGSGIKCVYVAIGQKASSVAAVVRKLEEHGAMEHTIVVAATASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +T+ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGEDALIIYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNAKYVEDFTNGEVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A +   KKL   +   + ++ E         +   +
Sbjct: 358 ADMFNAGVRPAMNAGISVSRVGGAAQAKIIKKLSGGIRTALAQYREL---AAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DDATKAQLDHGERVTELMKQKQYSPQS 441


>gi|186886249|gb|ACC93527.1| ATPase F1 alpha subunit [Juncus capensis]
          Length = 353

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 13/350 (3%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  +    + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 2   SGVKGIALNHENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGAPID 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 62  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 120

Query: 175 STLL--------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
           + +          M  + +     +   +G++   V + ++     N    SV+V AT+ 
Sbjct: 121 TAIAIDTILNQKEMNGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATAS 180

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  
Sbjct: 181 DPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 240

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 241 VFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELF 300

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
             G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 301 YRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 350


>gi|7708327|emb|CAB89910.1| ATP synthase beta subunit [Heisteria parvifolia]
          Length = 486

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     + + + + +V  G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFFPGKMLNIYNALVVXG--RDTVGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R     TA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGXTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|6467934|gb|AAF13233.1|AF197600_1 ATPase beta subunit [Potamogeton berchtoldii]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V      +  + + +V +G   D +G+ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGNMPNIYNALVVKGL--DTVGEQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLRRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYEIAQKVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62085178|gb|AAX62993.1| ATP synthase beta subunit [Phyllanthus epiphyllanthus]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGASLSVPVGGSTLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|23100430|ref|NP_693897.1| F0F1 ATP synthase subunit beta [Oceanobacillus iheyensis HTE831]
 gi|81845990|sp|Q8EM83|ATPB_OCEIH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|22778663|dbj|BAC14931.1| H(+)-transporting ATP synthase beta chain [Oceanobacillus iheyensis
           HTE831]
          Length = 464

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 195/407 (47%), Gaps = 13/407 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINL--DIVYICPVGIGEE 80
           G ++ +      V    ++   + + +V +  + + L   + ++L  + V    +   + 
Sbjct: 4   GRVTQLMGPVVDVRFEDAELPAVNNALVVRSDSGEELTLEVALHLGDNSVRTIAMSSTDG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
              G  V + GR   +       GRV N LG+ ID D+ L +G     I  + P   N  
Sbjct: 64  FKRGAEVENLGRPISVPVGDVTLGRVFNVLGEKIDLDEPLEEGVRRDPIHREAPDFENLS 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + + VG
Sbjct: 124 TETEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVG 183

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 184 ERTREGNDLYYEMSDSGVIAKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLL 243

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ ++ 
Sbjct: 244 FVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTDKGSVTSIQAIY 301

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D++ DP   +  + LD    L+R L+E+G YP VDPL S SR  D      +  ++ 
Sbjct: 302 VPADDYTDPAPATTFAHLDATTNLDRKLSEQGIYPAVDPLESTSRALDPEVVGKEHYEVA 361

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + +   + ++ E +DI  I G     D      V +   I  FL Q+
Sbjct: 362 TEVQQTLQKYRELQDIIAILGMDELSDED-KLVVARARRIQFFLSQN 407


>gi|331701229|ref|YP_004398188.1| ATP synthase subunit beta [Lactobacillus buchneri NRRL B-30929]
 gi|329128572|gb|AEB73125.1| ATP synthase subunit beta [Lactobacillus buchneri NRRL B-30929]
          Length = 478

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 120/429 (27%), Positives = 194/429 (45%), Gaps = 27/429 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD--------FVVHQGKNSDNLGQV-IRINLDIVY 71
              G +  +      V        L D          +H  ++ + + +V + +   +V 
Sbjct: 2   SSTGKVIQVIGPVVDVEF-----SLDDKLPEINTALAIHVSEDKNLIVEVALDLGDGVVR 56

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V +      +       GRV N LG PIDG    G       I  
Sbjct: 57  TIAMDGTDGLRRGMDVENTESSISVPVGKDTLGRVFNVLGDPIDGGPEFGPDAERWPIHR 116

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +      
Sbjct: 117 DAPKYDQLNPSTEILETGIKVIDLLEPYTRGGKVGLFGGAGVGKTVLIQELIHNIAQGHN 176

Query: 191 IISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            IS+   VGER RE  +   +  G  + +K+ +V    +E P  R    LT +TIAEYF 
Sbjct: 177 GISVFTGVGERTREGNDMYYEMKGSGVLEKTAMVYGQMNEPPGARMRVALTGLTIAEYFR 236

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG
Sbjct: 237 DEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKG 294

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
            IT++ +V V  D++ DP   +  + LD    L RSL ++G YP VDPLAS S   D A 
Sbjct: 295 AITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLASTSSALDPAI 354

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              +  ++ + + H++ R+ E +DI  I G     D      V++   I  FL QS    
Sbjct: 355 VGQEHYEVATEVQHVLQRYRELQDIISILGMDELSDEE-KTVVNRARRIQFFLSQS---F 410

Query: 425 SSEDVFQEI 433
           S  + F  +
Sbjct: 411 SVAEQFTGL 419


>gi|239832877|ref|ZP_04681206.1| ATP synthase F1, beta subunit [Ochrobactrum intermedium LMG 3301]
 gi|239825144|gb|EEQ96712.1| ATP synthase F1, beta subunit [Ochrobactrum intermedium LMG 3301]
          Length = 516

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 186/412 (45%), Gaps = 19/412 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G+I+ +      V     Q   + + +    + +  + +V   +  D V    +   E +
Sbjct: 48  GHITQVIGAVVDVKFPEGQLPLILNALEVDNQGNRLVLEVAQHLGEDTVRTIAMDATEGL 107

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR++N +G+P+D    + K   +  I    P  + +  
Sbjct: 108 VRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTTATRAIHQSAPEYIEQST 166

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 167 EAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 226

Query: 198 RGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G
Sbjct: 227 RTREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQG 286

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+
Sbjct: 287 QDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITS 344

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D     D 
Sbjct: 345 VQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGDE 404

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 405 HYAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 455


>gi|237744080|ref|ZP_04574561.1| ATP synthase subunit beta [Fusobacterium sp. 7_1]
 gi|256028115|ref|ZP_05441949.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. D11]
 gi|260494335|ref|ZP_05814466.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_33]
 gi|289766055|ref|ZP_06525433.1| ATP synthase subunit beta [Fusobacterium sp. D11]
 gi|229431309|gb|EEO41521.1| ATP synthase subunit beta [Fusobacterium sp. 7_1]
 gi|260198481|gb|EEW95997.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_33]
 gi|289717610|gb|EFD81622.1| ATP synthase subunit beta [Fusobacterium sp. D11]
          Length = 462

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/405 (27%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ I S    V    +   + + +  + ++ + + +V   +  ++V    +   + + 
Sbjct: 4   GTITQIISAVVDVAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLK 63

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   I       GR++N LG+P+D    +   +  + I  + P   + +  
Sbjct: 64  RGMEVIDTGKPITIPVGKVVLGRILNVLGEPVDNQGPIN-AETFLPIHREAPEFDDLETE 122

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 123 TEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGER 182

Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLIL 256
            RE R+   +      + K+ +V    +E P  R    LT +T+AE F  K   +VLL +
Sbjct: 183 TREGRDLYGEMTESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFI 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 243 DNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375
            D+  DP   +  S LD   VL+R++A  G YP VDPL S S+ L++     +  ++   
Sbjct: 301 ADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGKEHYEIARK 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 361 VQEVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIERFFSQP 404


>gi|183206690|gb|ACC54543.1| ATP synthase beta subunit [Campanula divaricata]
          Length = 485

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 8   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYKEMKDSGVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 363 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKMERFLSQP 421


>gi|139390355|ref|YP_001122953.1| ATPase beta subunit [Aethionema cordifolium]
 gi|190358249|sp|A4QJC2|ATPB_AETCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286148|dbj|BAF49777.1| ATPase beta subunit [Aethionema cordifolium]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|37721015|gb|AAN32510.1| ATP synthase beta subunit [Chlorophytum comosum]
          Length = 488

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|18075917|emb|CAD11915.1| ATP synthase beta subunit [Desfontainia spinosa]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +     ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFXGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718216|gb|AAK72846.1| ATP synthase beta subunit [Scoliopus hallii]
          Length = 487

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 427


>gi|7708183|emb|CAB90032.1| ATP synthase beta subunit [Blandfordia punicea]
          Length = 496

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVACEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGRATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|78185913|ref|YP_373956.1| F0F1 ATP synthase subunit beta [Chlorobium luteolum DSM 273]
 gi|78165815|gb|ABB22913.1| ATP synthase F1 subcomplex beta subunit [Chlorobium luteolum DSM
           273]
          Length = 482

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/432 (26%), Positives = 193/432 (44%), Gaps = 21/432 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVY 71
             + +Q G IS I      V     Q   + D +     +   L  V+     +  + V 
Sbjct: 17  HTVTMQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGSRL--VLETQQHLGEERVR 74

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V + GR  +        GR++N +G PIDG   +     +  I  
Sbjct: 75  TVAMESTDGLIRGLSVANTGRPIQAPVGEGVLGRMLNVVGDPIDGRGPVNATK-TYSIHR 133

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-- 188
             P   +     + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +      
Sbjct: 134 SAPKFEDLSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQS 193

Query: 189 -KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   + +    + K+ +V    +E P  R    LT ++IAEYF 
Sbjct: 194 GYSVFAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFR 253

Query: 247 SK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI  +  + G
Sbjct: 254 DEEHRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRI--TSTKNG 311

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 312 SVTSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNV 371

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              D      S+  ++ R+++ +DI  I G     D      V +   +  FL Q     
Sbjct: 372 IGDDHYDTAQSVKQILQRYKDLQDIIAILGMDELSDED-KLVVARARKVQRFLSQP---F 427

Query: 425 SSEDVFQEITKK 436
              + F  +  K
Sbjct: 428 FVAEAFTGLAGK 439


>gi|62085105|gb|AAX62959.1| ATP synthase beta subunit [Centroplacus glaucinus]
          Length = 489

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|227786|prf||1711264A CF1 ATPase:SUBUNIT=beta
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      +T    +   + + ++ + +++     +   +V ++  +  V    
Sbjct: 19  SVGRIDQIIGPVLDITFPPGKLPYIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14017579|ref|NP_114266.1| ATP synthase CF1 beta subunit [Triticum aestivum]
 gi|114574|sp|P20858|ATPB_WHEAT RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|473690|gb|AAA84726.1| ATP synthase beta subunit [Triticum aestivum]
 gi|13928212|dbj|BAB47041.1| ATPase beta subunit [Triticum aestivum]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++D        +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTDDKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257852948|gb|ACV71485.1| ATP synthase beta subunit [Eliea articulata]
          Length = 497

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/421 (27%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           GYI+ I      V    + +       VV   K  D +GQ I +  ++        V   
Sbjct: 21  GYITQIIGPVLDVAFPPRKMPNIYSALVV---KGRDTIGQEIYVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    L     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLG-LVDTRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 AD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              K    +  K    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQLKIVGEEHYKTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|139522628|gb|ABO77715.1| ATP synthase beta subunit [Burmeistera domingensis]
          Length = 498

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDPLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|119503555|ref|ZP_01625638.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium
           HTCC2080]
 gi|119460617|gb|EAW41709.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium
           HTCC2080]
          Length = 465

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 181/413 (43%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G +  +      V      V      +   +    L    ++   +V    +G  E 
Sbjct: 1   MSSGKVVQVIGAVIDVEFPRDNVPQVYDALSVSEKGLTLEVQQQLGDGVVRAIAMGSSEG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           IS G  V + G    +       GR+++ LG PID    +G+      I    P      
Sbjct: 61  ISRGLSVENTGAPISVPVGIETLGRIMDVLGNPIDEKGPIGE-QQRSAIHRAAPAYDELA 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             E+  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VG
Sbjct: 120 ASEEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +T+AE F  +
Sbjct: 180 ERTREGNDFYYEMQESGVVNIENMDQSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDE 239

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 240 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D      
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLVIGT 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 EHYDVARGVQSVLQRYKELKDIIAILGMDELSEED-KLTVSRARKIERFLSQP 409


>gi|112791340|gb|ABI21940.1| ATP synthase beta subunit [Enterobacter aerogenes]
          Length = 421

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   +V    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNESLVLEVQQQLGGGVVRAIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  L+ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|63091853|emb|CAH58777.1| ATP synthase alpha chain [Enterococcus asini]
          Length = 367

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +          G    +  + V I  +G  E+I  GD V   G+  
Sbjct: 1   RAHGL-EGAMSGELLEFANG---TFGMAQNLETNDVGIIILGDFEDIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + K D    + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEAMIGRVVNPLGQPIDGLGPI-KTDKFRPVETMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIEDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRAQVETLRK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 +++V A + +   +  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGAMDYTIIVSAGASQPAPMLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGVRPAIDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDQAT 367


>gi|37721001|gb|AAN32503.1| ATP synthase beta subunit [Phormium tenax]
          Length = 490

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTASQQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 WIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718252|gb|AAK72864.1| ATP synthase beta subunit [Retanilla trinervia]
          Length = 491

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQKMNVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYIEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|5758893|gb|AAD50867.1| ATP synthase beta subunit [Hyacinthus orientalis]
          Length = 496

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|52426401|ref|YP_089538.1| F0F1 ATP synthase subunit beta [Mannheimia succiniciproducens
           MBEL55E]
 gi|81825450|sp|Q65Q07|ATPB_MANSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|52308453|gb|AAU38953.1| AtpD protein [Mannheimia succiniciproducens MBEL55E]
          Length = 458

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 185/406 (45%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +   +    L    ++   IV    +G  + 
Sbjct: 1   MSAGKIVQIIGAVIDVEFPENAVPKVYDALKVAEGGLTLEVQQQLGGGIVRCIAMGSSDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G+   +       GR++N LG+P+D    +G  +    I  + P    + 
Sbjct: 61  LKRGLSVSNTGKPISVPVGTKTLGRIMNVLGEPVDEQGPIGAEE-EWAIHREAPSYEEQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 120 NSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL  
Sbjct: 180 ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V V
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   +  
Sbjct: 298 PADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVAR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 GVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 402


>gi|115564925|emb|CAJ70593.1| ATP synthase beta subunit [Ostrearia australiana]
          Length = 467

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|212896600|gb|ACJ38503.1| membrane-bound ATP synthase subunit B [Glycine max]
          Length = 470

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        +    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRIRAVA 61

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATEGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|254382326|ref|ZP_04997686.1| ATP synthase subunit A [Streptomyces sp. Mg1]
 gi|194341231|gb|EDX22197.1| ATP synthase subunit A [Streptomyces sp. Mg1]
          Length = 531

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/435 (20%), Positives = 164/435 (37%), Gaps = 24/435 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYQPDAASREEVGTVSVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAVVLGEFSGIEEGQPVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + ID   P+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPGVMVRKSVHEPMQTGYKAIDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEDAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYAGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRLDLAQYRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 425 GKRLVELLKQGQYQP 439


>gi|155029321|dbj|BAF75544.1| ATP synthase beta subunit [Sumbaviopsis albicans]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFTPGKMPNIYNALVVKG--RDTIGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGTEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|23464958|ref|NP_695561.1| F0F1 ATP synthase subunit alpha [Bifidobacterium longum NCC2705]
 gi|189439988|ref|YP_001955069.1| F0F1 ATP synthase subunit alpha [Bifidobacterium longum DJO10A]
 gi|227545746|ref|ZP_03975795.1| F0F1 ATP synthase subunit alpha [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239622551|ref|ZP_04665582.1| ATP synthase subunit alpha [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296453447|ref|YP_003660590.1| ATP synthase F1 subunit alpha [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312133383|ref|YP_004000722.1| atpa [Bifidobacterium longum subsp. longum BBMN68]
 gi|317481933|ref|ZP_07940958.1| ATP synthase F1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322688427|ref|YP_004208161.1| ATP synthase subunit alphalpha [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322690446|ref|YP_004220016.1| ATP synthase alpha subunit [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|81754475|sp|Q8G7B1|ATPA_BIFLO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|226739849|sp|B3DTV2|ATPA_BIFLD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|23325555|gb|AAN24197.1| ATP synthase alpha chain [Bifidobacterium longum NCC2705]
 gi|189428423|gb|ACD98571.1| F0F1-type ATP synthase alpha subunit [Bifidobacterium longum
           DJO10A]
 gi|227213862|gb|EEI81701.1| F0F1 ATP synthase subunit alpha [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239514548|gb|EEQ54415.1| ATP synthase subunit alpha [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291517460|emb|CBK71076.1| ATP synthase F1 subcomplex alpha subunit [Bifidobacterium longum
           subsp. longum F8]
 gi|296182878|gb|ADG99759.1| ATP synthase F1, alpha subunit [Bifidobacterium longum subsp.
           longum JDM301]
 gi|311772609|gb|ADQ02097.1| AtpA [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916500|gb|EFV37897.1| ATP synthase F1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455302|dbj|BAJ65924.1| ATP synthase alpha subunit [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320459763|dbj|BAJ70383.1| ATP synthase alpha subunit [Bifidobacterium longum subsp. infantis
           157F]
          Length = 543

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 93/421 (22%), Positives = 174/421 (41%), Gaps = 21/421 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + GY+++       VT L       + +  +      LG    ++   + +  +G    I
Sbjct: 31  EVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAFNLDAREIGVVILGDFAGI 86

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV++ LGKP+DG   +   +    + ++ P  M+R  
Sbjct: 87  EEGQEVRRTGEVLSVPVGDGYLGRVVDPLGKPLDGLGEIQGIEGRRILEAQAPDVMHRHP 146

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++   TG++ ID  TP+  GQR  +      GK      T+++  A  +  D     + 
Sbjct: 147 VDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTIINQKANWESGDPKKQVRC 206

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +    +          + +V + + +S   + +AP T   I +++   G
Sbjct: 207 IYVAIGQKGSTIASVKQSLEDAGAMEYTTIVASPAADSAGFKYIAPYTGSAIGQHWMYNG 266

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G++
Sbjct: 267 KHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKVSDDLGGGSM 326

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  V    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A + 
Sbjct: 327 TGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAQTK 386

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             KK+  +L   + ++       +   +   +D      + +   + + LKQ      S 
Sbjct: 387 ALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLTRGAHLTELLKQPQFHPYSP 443

Query: 428 D 428
           +
Sbjct: 444 E 444


>gi|227327856|ref|ZP_03831880.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 460

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   IV    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLNVNNLNHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEE-RWAIHRSAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|183206616|gb|ACC54506.1| ATP synthase beta subunit [Wahlenbergia angustifolia]
          Length = 479

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 2   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 60  MSATEGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|186886233|gb|ACC93519.1| ATPase F1 alpha subunit [Luzula spicata]
          Length = 351

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 152/351 (43%), Gaps = 15/351 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 2   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 62  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 120

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   +G++   V + ++     N    SV+V AT
Sbjct: 121 TAIAIDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAAT 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 181 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 240

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 241 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 300

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       
Sbjct: 301 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQF 351


>gi|241206625|ref|YP_002977721.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860515|gb|ACS58182.1| ATP synthase F1, beta subunit [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 478

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 185/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G ++ +      V    +   + + +      +  + +V   +  ++V    +   E 
Sbjct: 11  SVGRVTQVIGAVVDVAFEGELPKILNALETSNNGNRLVLEVAQHLGENVVRTIAMDSSEG 70

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    L        I  + P  + + 
Sbjct: 71  LVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTA-HKRSIHQEAPSYVEQS 129

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 130 TESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 189

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   + +        G    K+ +V    +E P  R    LT +T+AE+F  +
Sbjct: 190 ERTREGNDLYHEMIESNVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQ 249

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +     +IT
Sbjct: 250 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTTTG--SIT 307

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      
Sbjct: 308 SVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGE 367

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 368 EHYDVARKVQSTLQRYKALQDIIAILGMDELSEED-KIAVARARKIERFLSQP 419


>gi|155029319|dbj|BAF75543.1| ATP synthase beta subunit [Speranskia cantonensis]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119367994|dbj|BAF40480.1| ATP synthase beta subunit [Sacoglottis sp. Hammel 18390]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 SFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|8517653|emb|CAB94374.1| ATP synthase beta subunit [Phelline comosa]
          Length = 487

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850924|gb|AAC72154.1| ATP synthase beta subunit [Beauprea montana]
          Length = 490

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYIEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62085173|gb|AAX62991.1| ATP synthase beta subunit [Paradrypetes subintegrifolia]
          Length = 482

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V      +  + + +V +G+  D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGNMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVN-NRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|155029295|dbj|BAF75528.1| ATP synthase beta subunit [Argomuellera macrophylla]
          Length = 480

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAIA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G   R+       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGTPLRVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|118917412|dbj|BAF40521.1| ATP synthase beta subunit [Casearia sp. Tokuoka NC052]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGTEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708147|emb|CAB89956.1| ATP synthase beta subunit [Androsace spinulifera]
          Length = 478

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G   R+       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGTALRVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|14718193|gb|AAK72835.1| ATP synthase beta subunit [Prunus persica]
          Length = 480

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDAVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    L A+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINXQNIAESKVALVYGQMNEPPGARMRVGLXALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 424


>gi|71066578|ref|YP_265305.1| F0F1 ATP synthase subunit beta [Psychrobacter arcticus 273-4]
 gi|118573726|sp|Q4FQ37|ATPB_PSYA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71039563|gb|AAZ19871.1| ATP synthase F1, beta subunit [Psychrobacter arcticus 273-4]
          Length = 477

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/421 (25%), Positives = 182/421 (43%), Gaps = 26/421 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGRIVQIIGAVLDVEFNRNEVPRIYDALQVDGTETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V + G    +       GR+++ LG+PID +  + + D    I  + P    +
Sbjct: 60  GLKRNLSVTNTGGPISVPVGVGTLGRIMDVLGRPIDEEGPV-EADERWSIHREAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    L+ +T+AEYF  
Sbjct: 179 GERTREGNDFYHEMQEAGVVNTEDFSKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRD 238

Query: 248 KGDNVL-------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
             D          L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +
Sbjct: 239 TKDPATGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGMLQERI--T 296

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR 
Sbjct: 297 STQSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQ 356

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +   +   +  ++ R++E +DI  I G     +      V++   I  FL Q
Sbjct: 357 LDPLVIGEEHYNVARGVQEVLQRYKELKDIIAILGMDELSEED-KLVVYRARKIQRFLSQ 415

Query: 420 S 420
            
Sbjct: 416 P 416


>gi|305671691|gb|ADM63155.1| ATP synthase beta subunit [Angelica sylvestris]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917344|dbj|BAF40458.1| ATP synthase beta subunit [Necepsia afzelii]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKNSGVVNEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|23272966|gb|AAH37127.1| Atp5b protein [Mus musculus]
          Length = 533

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 62  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 121

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 122 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 180

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 181 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 240

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 241 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 300

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 301 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 358

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 359 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 418

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 419 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 471


>gi|312597797|gb|ADQ89912.1| RscN [Pseudomonas fluorescens]
          Length = 452

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 153/436 (35%), Positives = 234/436 (53%), Gaps = 14/436 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLD 68
           QLA       V+  G +  ++ +     C      +GD    +    +  L +++  +  
Sbjct: 16  QLAHLRRFAPVMVRGRVQRVSGILLQ--CRLPGAQIGDLCRVERDTREPLLAEIVGFDQH 73

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI-DGDDSLGKGDL-- 124
              +  +G  E I +G  V   G   R+       G+V++  G+P+ DG      G    
Sbjct: 74  DALLSALGGLEGIRVGAAVEPLGMPHRVCVGPELLGQVLDGFGRPLLDGGTGAFAGPHVL 133

Query: 125 -SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + E++ + P    R R+++  +TG+R ID    L  GQR+G+FAG+G GK+TLL+  AR
Sbjct: 134 HASEVIGEAPAPTARPRIQRPLRTGVRAIDGPLTLGEGQRVGLFAGAGCGKTTLLAEIAR 193

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D ++  L+GERGRE+REF+  +   +   ++V+V ATSD S + R  A  TA  +A
Sbjct: 194 NVDCDVIVFGLIGERGRELREFLDHELDDELRARAVLVCATSDRSSMERARAAFTATALA 253

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F ++G  VLL++DS+TRFA + REI   +GE     G P SV+  LPRL+ER G + +
Sbjct: 254 EGFRARGQRVLLLIDSLTRFARAQREIGLAAGEPLGRGGLPPSVYGLLPRLVERAGLTNE 313

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G ITA  +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D LAS+SR   
Sbjct: 314 --GAITAFYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVLASLSRTLA 371

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
               A+  +   +L  L+  +E+   +  +G Y+ G D + D AV     +  FL+Q   
Sbjct: 372 NVAEAEHLRAGINLRRLLSAYEQIELMLRLGEYQAGADPLTDLAVESRGALDAFLRQ--- 428

Query: 423 DLSSEDVFQEITKKLQ 438
           DL   + F      LQ
Sbjct: 429 DLREPEPFASTLAHLQ 444


>gi|296936678|gb|ADH94350.1| ATP synthase CF1 beta subunit [Syzygium cumini]
          Length = 498

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTIGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|157689158|gb|ABV65135.1| ATP synthase CF1 beta subunit [Heuchera sanguinea]
          Length = 498

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLRRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118917368|dbj|BAF40479.1| ATP synthase beta subunit [Humiria balsamifera var. balsamifera]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|34499996|gb|AAQ73580.1| ATP synthase beta subunit [Volucribacter psittacicida]
          Length = 444

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 186/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+   N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYDALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V    +   +       GR++N LG+PID    +G  + S  I    P  
Sbjct: 56  SSDGLKRGLSVTDTKKPISVPVGTKTLGRIMNVLGEPIDEKGEIGAEE-SWSIHRAPPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           + +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 VEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 293 AVYVPDDDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|305671667|gb|ADM63143.1| ATP synthase beta subunit [Polyscias guilfoylei]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|183206600|gb|ACC54498.1| ATP synthase beta subunit [Prismatocarpus sessilis]
          Length = 481

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 12  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|119368026|dbj|BAF40517.1| ATP synthase beta subunit [Bruguiera gymnorhiza]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVN-SRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910856|gb|ABI48160.1| ATPase beta subunit [Ceratodon purpureus]
          Length = 456

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 12  KGQNTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGEATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|24940164|emb|CAD43393.1| ATP synthase beta subunit [Buglossoides purpurocaerulea]
          Length = 480

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRVVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|5758906|gb|AAD50880.1| ATP synthase beta subunit [Phenakospermum guyannense]
          Length = 496

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF       VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQKVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLXVARARKIERFLSQP 434


>gi|312285229|gb|ADQ64356.1| ATP synthase beta subunit [Hypserpa decumbens]
 gi|312285231|gb|ADQ64357.1| ATP synthase beta subunit [Hypserpa nitida]
          Length = 469

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 182/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|170178350|gb|ACB10594.1| ATP synthase beta subunit [Cornus kousa]
          Length = 450

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTPGQPINVTCEVQQLLGTNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|194267377|gb|ACF35674.1| ATP synthase beta subunit [Macadamia ternifolia]
          Length = 483

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|119367984|dbj|BAF40474.1| ATP synthase beta subunit [Euphorbia humifusa]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVLDTEAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|8452779|emb|CAB90010.1| ATP synthase beta subunit [Staphylea trifolia]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      V     +   + + +V  G   D +GQ I +  ++        V   
Sbjct: 12  SGRIAQIIGPVLDVAFPPGKMPNIYNALVVXG--RDTVGQQINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|5758897|gb|AAD50871.1| ATP synthase beta subunit [Mayaca fluviatilis]
          Length = 496

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G+++D  G+ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVIFPPGRMPNIYNALVVKGRDTD--GRQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAALSVPVGGTTLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINENNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNGQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34500921|ref|NP_904106.1| ATP synthase CF1 beta subunit [Amborella trichopoda]
 gi|75325845|sp|Q70XZ6|ATPB_AMBTC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|34481636|emb|CAD45114.1| ATPase beta subunit [Amborella trichopoda]
          Length = 500

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/423 (26%), Positives = 180/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I+ I      V      +       VV   K  D  GQ I +  ++        V 
Sbjct: 21  SVGRIAQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTAGQQINVTCEVQQLLGNNRVR 77

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 78  TVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVD-TRTTSPIHR 136

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 137 SAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 196

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 197 GVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTAL 256

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 257 TMAEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 315

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 316 -TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 374

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 375 TMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGPDELSEED-RLTVARARKIERFL 433

Query: 418 KQS 420
            Q 
Sbjct: 434 SQP 436


>gi|297380580|gb|ADI35467.1| ATPase FliI/YscN family [Helicobacter pylori v225d]
          Length = 434

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 232/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   ++ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID   +L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLHARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|284504902|gb|ADB91400.1| ATP synthase alpha subunit [Lactococcus lactis subsp. lactis]
          Length = 382

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 96/388 (24%), Positives = 159/388 (40%), Gaps = 14/388 (3%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +         L +    G+ V         LG    +    V I  +G    I  GD V 
Sbjct: 3   VGDGIARAYGL-ENAMSGELVEFSNG---VLGMAQNLEATDVGIIVLGDFLSIREGDTVK 58

Query: 89  HWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G+   I       GRV+N LG+P+DG   L  G  +  + +K P  M R+ V +  +T
Sbjct: 59  RTGKIMEIQVGEELIGRVVNPLGQPVDGLGELNTGK-TRPVEAKAPGVMQRKSVSEPLQT 117

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREF 205
           G++ ID   P+  GQR  +      GK+++      +        I   +G++   VR  
Sbjct: 118 GLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQ 177

Query: 206 IEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +E       +  ++VV A++ +   L  +AP     +   F   G +VL++ D +++ A 
Sbjct: 178 VETLRKLGAMDYTIVVTASASQPSPLLYIAPYAGAAMGGEFMYNGKHVLVVYDDLSKQAV 237

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + RE++      P    YP  VF    RLLER      +   G++TA+  +     + + 
Sbjct: 238 AYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFIETQAGDISA 297

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            IA +V SI DG I L   L   G  P +D  +SVSR+   A     KK+  +L   +  
Sbjct: 298 YIATNVISITDGQIFLENDLFYSGVRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRLDLAS 357

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQV 410
           F E         +   +D      +++ 
Sbjct: 358 FRELE---AFTQFGSDLDEATQAKLNRG 382


>gi|170178357|gb|ACB10598.1| ATP synthase beta subunit [Cornus hongkongensis]
          Length = 450

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGPITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|139522643|gb|ABO77725.1| ATP synthase beta subunit [Burmeistera cyclostigmata]
          Length = 498

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDPLGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|155029301|dbj|BAF75531.1| ATP synthase beta subunit [Erythrococca anomala]
 gi|155029307|dbj|BAF75534.1| ATP synthase beta subunit [Lobanilia bakeriana]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|3850954|gb|AAC72169.1| ATP synthase beta subunit [Lambertia formosa]
          Length = 490

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+ ++ + +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 48  GQQTNVICEVQQLLGNNRVRAVAMSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLG 107

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 108 EPVDNLGPV-ATRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 166

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +  ++               K  +
Sbjct: 167 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVAL 226

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 227 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 286

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 287 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 345 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDE 404

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +     AV +   I  FL Q 
Sbjct: 405 LSEED-RLAVARARKIERFLSQP 426


>gi|332884317|gb|EGK04585.1| ATP synthase subunit alpha [Dysgonomonas mossii DSM 22836]
          Length = 528

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 102/450 (22%), Positives = 175/450 (38%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  LE+++   +        + G +  +      +  L +     + +         + 
Sbjct: 14  LKMQLESISSRVQ------FEEVGTVLYVGDGVVRIYGL-KNAEANELLEFDNG---IMA 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G  V   GR   I+      GRVIN LG+P+DG   +
Sbjct: 64  VVMNLEEDNVGAVLLGPSDQIKEGFTVKRTGRIASINVGEGMLGRVINPLGEPLDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
               L M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 124 AGELLEMPLERKAPGVIYRQPVTQPLQTGLKSVDAMIPIGRGQRELIIGDRQTGKTAIAI 183

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            T+++  +  D  D    I   +G++   V   +E          +VVV AT+ E   ++
Sbjct: 184 DTIINQRSNYDAGDPVYCIYVAIGQKASTVANIVETLKEKGALDYTVVVSATAAEPAAVQ 243

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A      I EYF   G + L++ D +++ A + RE++      P    YP  +F    
Sbjct: 244 YFAAFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPPGREAYPGDIFYLHS 303

Query: 292 RLLERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER      +                     G++TA+  +     + +  I  +V SI
Sbjct: 304 RLLERAAKIINQQEVAEQMNDLPASLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISI 363

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+  L   G  P +D   SVSR+   A     KK+  +L     ++ E      
Sbjct: 364 TDGQIFLDIDLFNAGMRPAIDVGISVSRVGGSAQVKAMKKVAGTLKIDQAQYRELEAFTQ 423

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            GG    +D +    + +       L Q  
Sbjct: 424 FGG---DMDPVTAMTIDKGKKNTVLLVQPQ 450


>gi|296282406|ref|ZP_06860404.1| F0F1 ATP synthase subunit beta [Citromicrobium bathyomarinum JL354]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/450 (24%), Positives = 200/450 (44%), Gaps = 27/450 (6%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRIN 66
           +A  A+  +K  +   G I+ +      V    +   +   +  +  +S  + +V   + 
Sbjct: 1   MATAAKTTTKPNLTGNGTIAQVIGAVVDVHFEGELPAILTALETKNGDSTLVLEVAQHLG 60

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + ++ G  V + G +  +       GR++N +G+ ID    +G  + +
Sbjct: 61  ENTVRTIAMDGTDGLTRGQEVTNTGAQISVPVGPKTLGRIMNVIGEAIDERGPIG-AEKT 119

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I ++ P  +++        TGI+VID+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 120 APIHAEAPEFVDQSTESSILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNI 179

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPI 229
                   + + VGER RE  +   ++L   +              K  +V    +E P 
Sbjct: 180 AKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKDAEGNATSEGSKVALVFGQMNEPPG 239

Query: 230 LRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R    L+ +T+AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 240 ARARVALSGLTMAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 299

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           ++  L ERI  +   KG+IT+V ++ V  D+  DP   +  + LD    LNR+++E G Y
Sbjct: 300 DMGNLQERI--TSTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLNRAISELGIY 357

Query: 349 PPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P VDPL S SR+ +      +  +    +   + +++  +DI  I G     +      V
Sbjct: 358 PAVDPLDSTSRVLEPRVVGEEHYETARKVQETLQKYKSLQDIIAILGMDELSEED-KLTV 416

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +   I  FL Q        +VF  I  + 
Sbjct: 417 ARARKIQRFLSQP---FHVAEVFTNIPGQF 443


>gi|254706313|ref|ZP_05168141.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10]
 gi|261313760|ref|ZP_05952957.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10]
 gi|261302786|gb|EEY06283.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10]
          Length = 390

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 193/382 (50%), Positives = 256/382 (67%), Gaps = 2/382 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+IT + SVLVDGD+HNDP++D++R  LDGHIVL+R++A +GR+P VD  ASVSRLA
Sbjct: 309 EAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLA 368

Query: 362 DKAWSADEKKLVSSLTHLIHRF 383
              W+ +++KLV  L  ++ RF
Sbjct: 369 KHNWTPEQRKLVMQLRSMVARF 390


>gi|224823532|ref|ZP_03696641.1| ATP synthase F1, beta subunit [Lutiella nitroferrum 2002]
 gi|224603987|gb|EEG10161.1| ATP synthase F1, beta subunit [Lutiella nitroferrum 2002]
          Length = 464

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +   A   GR+++ LG P+D    +   +
Sbjct: 45  LGDGVVRTIAMGSSDGLKRGMAVVNTGAAISVPVGAATLGRIMDVLGNPVDEAGPV-ATE 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 TRRAIHQPAPKFDELSSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           T+AE F  + D           +D+I R+  +  E++   G +P A GY  ++  E+ RL
Sbjct: 224 TMAEQFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 283

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 284 QERI--TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDP 341

Query: 354 LASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR  D     DE   +   +   + +++E RDI  I G     +      V +   
Sbjct: 342 LDSTSRQLDPLVVGDEHYSVARGVQTTLQKYKELRDIIAILGMDELSEED-KLVVARARK 400

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 401 IQRFLSQP 408


>gi|194267385|gb|ACF35678.1| ATP synthase beta subunit [Grevillea caleyi]
          Length = 487

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|153806525|ref|ZP_01959193.1| hypothetical protein BACCAC_00789 [Bacteroides caccae ATCC 43185]
 gi|149131202|gb|EDM22408.1| hypothetical protein BACCAC_00789 [Bacteroides caccae ATCC 43185]
          Length = 527

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 95/450 (21%), Positives = 168/450 (37%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE +    +      + + G +  ++     +  L +     + +           
Sbjct: 14  LRKQLEGINTHVQ------LDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKA 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  + I  G +V        I       GRVI+ LG+P+DG   +
Sbjct: 64  IVMNLEEDNVGAVLLGPTDRIKEGFIVKRTKHIASIRVGESMLGRVIDPLGEPLDGKGLI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G     M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 124 GGDLYEMPLERKAPGVIFRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 183

Query: 180 MFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
               +   +         I   +G++G  V   +           +VVV AT+ +   L+
Sbjct: 184 DTIINQRTNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGAMDYTVVVAATAGDPAALQ 243

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G + L++ D +++ A + RE++           YP  +F    
Sbjct: 244 YYAPFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 303

Query: 292 RLLERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER      +                     G++TA+  +     + +  I  +V SI
Sbjct: 304 RLLERAAKIINQEEVAREMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISI 363

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E      
Sbjct: 364 TDGQIFLETDLFNQGVRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---A 420

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +   +D I    + +       L Q  
Sbjct: 421 FSKFSSDMDPITALTIDKGRKNAQLLIQPQ 450


>gi|119368034|dbj|BAF40525.1| ATP synthase beta subunit [Idesia polycarpa]
          Length = 488

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGRMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708304|emb|CAB90081.1| ATP synthase beta subunit [Frankenia pulverulenta]
          Length = 487

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|5758861|gb|AAD50835.1| ATP synthase beta subunit [Canna tuerckheimii]
          Length = 496

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|305671701|gb|ADM63160.1| ATP synthase beta subunit [Pseudopanax colensoi]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|270313035|gb|ACZ73599.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 498

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|118917326|dbj|BAF40447.1| ATP synthase beta subunit [Caryodendron orinocense]
          Length = 480

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|21684907|emb|CAD11580.1| ATP synthase beta subunit [Mayaca fluviatilis]
          Length = 491

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G+++D  G+ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVIFPPGRMPNIYNALVVKGRDTD--GRQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAALSVPVGGTTLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINENNLAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNGQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|4063546|gb|AAC98331.1| ATP synthase beta subunit [Francoa appendiculata]
          Length = 456

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|3850912|gb|AAC72148.1| ATP synthase beta subunit [Cenarrhenes nitida]
          Length = 490

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRIKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|312958824|ref|ZP_07773343.1| type III secretion system rscN [Pseudomonas fluorescens WH6]
 gi|311286594|gb|EFQ65156.1| type III secretion system rscN [Pseudomonas fluorescens WH6]
          Length = 452

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 159/446 (35%), Positives = 238/446 (53%), Gaps = 13/446 (2%)

Query: 1   MQKNLET--LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSD 57
           +Q+ LE     Q     +   V   G I  ++ +     C      +GD   V +    D
Sbjct: 5   LQERLEAWQRKQSQALIAFAPVTARGRIQRVSGMLLQ--CRLPQARIGDLCRVEKNPGDD 62

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD 116
            L ++I  +     +  +G  E + +G  V   G   R+  S    G+V++  G+PI GD
Sbjct: 63  MLAEIIGFDQQDAVLSALGNLEGVRVGASVERLGVPHRVQVSDELLGQVLDGFGRPIAGD 122

Query: 117 DSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
                 D     +  ++ + P    R R+ +   TG+R ID    L  GQR+G+FAG+G 
Sbjct: 123 GPSAFADAQASDATPVLCEAPLPTERPRINRALATGVRSIDGLITLGEGQRVGLFAGAGC 182

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILR 231
           GK+TLL+  AR+   D ++  L+GERGRE+REF+  +       K+V+V ATSD S + R
Sbjct: 183 GKTTLLAEIARNVECDVIVFGLIGERGRELREFLDHELDDQLRAKAVLVCATSDRSSMER 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A  TA  +AE F  KG  VLL++DS+TRFA + REI   +GE     G P SV+S LP
Sbjct: 243 ARAAFTATALAEGFRRKGQRVLLLIDSLTRFARAQREIGLAAGEPLGRGGLPPSVYSLLP 302

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RL+ER G + +  G ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP V
Sbjct: 303 RLVERAGLTRE--GVITAIYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAV 360

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D LAS+SR+      + + +  ++L  L+  +++   +  +G Y+PG D + D AV    
Sbjct: 361 DVLASLSRILSNVARSADIQAGTALRRLLSAYQQIELMLKLGEYQPGSDALTDLAVDSRQ 420

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  FL+Q   + S      +  K L
Sbjct: 421 AVDGFLRQDLREPSPMLATLDQLKTL 446


>gi|188528185|ref|YP_001910872.1| flagellum-specific ATP synthase [Helicobacter pylori Shi470]
 gi|188144425|gb|ACD48842.1| flagellum-specific ATP synthase [Helicobacter pylori Shi470]
 gi|308062682|gb|ADO04570.1| flagellum-specific ATP synthase [Helicobacter pylori Cuz20]
          Length = 434

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 232/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   ++ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID   +L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLHARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|119368186|dbj|BAF40436.1| ATP synthase beta subunit [Licania elaeosperma]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|186477773|ref|YP_001859243.1| F0F1 ATP synthase subunit beta [Burkholderia phymatum STM815]
 gi|184194232|gb|ACC72197.1| ATP synthase F1, beta subunit [Burkholderia phymatum STM815]
          Length = 464

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 187/411 (45%), Gaps = 11/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++ +G       Q  ++   +V    +
Sbjct: 2   STTALVEGKIVQCIGAVIDVEFPREHMPKVYDALILEGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V +      +       GR+++ LG+PID    +   D    I  K P 
Sbjct: 61  GSSDGLRRGVIVKNTAKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ASDNMRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGL 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V
Sbjct: 240 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 298 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 358 YSITRGVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 407


>gi|14718153|gb|AAK72815.1| ATP synthase beta subunit [Nuphar variegata]
          Length = 474

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D  GQ I +  ++        V   
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTAGQEINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|21633381|gb|AAM52165.1| ATP synthase beta subunit [Wilsonia humilis]
          Length = 490

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V   +  +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPAGKMPNIYNALVVQGRDNEQTNVTCEVQQLVGNNRVRTVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TKTTSPIHRSAPAFVQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|14718090|gb|AAK72785.1| ATP synthase beta subunit [Ixonanthes icosandra]
          Length = 475

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|283782095|ref|YP_003372850.1| ATPase, FliI/YscN family [Pirellula staleyi DSM 6068]
 gi|283440548|gb|ADB18990.1| ATPase, FliI/YscN family [Pirellula staleyi DSM 6068]
          Length = 455

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 159/408 (38%), Positives = 229/408 (56%), Gaps = 11/408 (2%)

Query: 27  SSITSVYYTVTCLSQYVC-----LGDFVVHQGK-NSDNLGQVIRINLDIVYICPVGIGEE 80
           S I+        L+         LG   + + +  +    +VI    ++  + P+G    
Sbjct: 15  SRISGSIVRTEGLTAAAAGFPAPLGSLALIERQAGAPVEAEVIGFRDNLTLLFPLGDVIG 74

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G+ V      R +       GRVI+A G+ ID   +    D  + +  K P A +R 
Sbjct: 75  IRQGNRVTLARSTRSVRVGNQLLGRVIDARGRVIDNKPAPVLAD-RVPLDRKPPAATSRP 133

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R++  F TG+R ID       GQRIGVFAGSG+GKS  L M A+    D ++I L+GERG
Sbjct: 134 RIDTTFSTGVRAIDGLLTCGVGQRIGVFAGSGVGKSVTLGMMAKYSSADVIVIGLIGERG 193

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV EF+  D     L +SV VVATSDE  I+R  A  TA  +AEYF  +G NVLL++DS
Sbjct: 194 REVNEFLERDLGPTGLARSVCVVATSDEPAIMRVQAASTATAVAEYFRDQGKNVLLMMDS 253

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + REI   +GE P  RGYP SVF+ LPRL+ER G     +G+ITA+ SVLV+GD
Sbjct: 254 LTRFALAQREIGLAAGEPPTTRGYPPSVFALLPRLVERAGR--TPQGSITAIYSVLVEGD 311

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P++D+VR +LDGH++L+R LA +  YP ++ L S+SRL  +  +  ++   + +  
Sbjct: 312 DVNEPVSDTVRGLLDGHVILSRKLAAQSHYPAIEVLGSISRLFTEITTPQQRSAAAIVRE 371

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           L+  + E  D+  IG YR G +  +D A+     I  FLKQS  + + 
Sbjct: 372 LLSAYREHEDLISIGAYRTGANPTVDTAIAMRGEILQFLKQSIDEKTD 419


>gi|215400698|ref|YP_002327459.1| ATP synthase CF1 subunit b [Vaucheria litorea]
 gi|194441148|gb|ACF70876.1| ATP synthase CF1 subunit b [Vaucheria litorea]
          Length = 473

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 188/413 (45%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           GY++ I      V   S  +  + + +    K +  + +V ++  D  V    +   + +
Sbjct: 9   GYVTQIIGPVLDVVFPSGNLPKIYNAINVLNKKNIIVCEVQQLLGDNKVRAVAMSATDGL 68

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LG+P+D    +  G  ++ I  + P   + + 
Sbjct: 69  KRGIEVHDTGAPINVPVGEVTLGRIFNILGEPVDNLGEIS-GAPTLPIHREAPSFTDLET 127

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 128 TPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVEE 187

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    L+A+T+AEYF    
Sbjct: 188 RTREGNDLYMEMKESGVIQANNLTESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDIN 247

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT
Sbjct: 248 NQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTTQGSIT 305

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  ++    
Sbjct: 306 SIQAVYVPADDLTDPAPATTFAHLDTTTVLSRGLAAKGIYPAVDPLDSTSTMLQESIVGT 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  K   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 EHYKTAQAVKETLQRYKELQDIIAILGIDELSEDD-RLVVARARKIERFLSQP 417


>gi|75330483|sp|Q8MBM3|ATPB_CONAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633327|gb|AAM52138.1| ATP synthase beta subunit [Convolvulus arvensis]
          Length = 490

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMAVINTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|189345587|ref|YP_001942116.1| F0F1 ATP synthase subunit beta [Chlorobium limicola DSM 245]
 gi|226740177|sp|B3EDQ7|ATPB_CHLL2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189339734|gb|ACD89137.1| ATP synthase F1, beta subunit [Chlorobium limicola DSM 245]
          Length = 462

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 200/428 (46%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +     +   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGQLPSILDALYIVRPDGSRL--VLETQQHLGEERVRTVAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + G+  ++   +   GR++N +G+PIDG  ++     +  I    P 
Sbjct: 59  ESTDGLVRGLSVVNTGKSIQVPVGSEVLGRMLNVVGEPIDGKGAVN-TKKTYSIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             +     + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +    +    +
Sbjct: 118 FEDLSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-G 249
            + VGER RE  +   + +    ++K+ +V    +E P  R+   LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLYHEMMESGVIEKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEEN 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI  +  + G++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRI--TSTKNGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  ++ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYNTAQAVKQILQRYKDLQDIIAILGMDELSDED-KLVVSRARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|323715446|gb|ADY04791.1| ATP synthase beta subunit [Grubbia tomentosa]
          Length = 486

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|290473116|ref|YP_003465977.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289172410|emb|CBJ79177.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 460

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  +      + +V + +   IV    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDSVPKVYNALEVKNSEEKLVLEVQQQLGGGIVRCIAMGTS 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G D +       +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLDAIDLGHPIEVPVGKATLGRIMNVLGDPIDMKGEIGEEE-RWSIHRTAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSSSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|119368188|dbj|BAF40437.1| ATP synthase beta subunit [Parinari sp. Mlangwa et al. 1138]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118614499|ref|YP_899414.1| ATP synthase CF1 beta subunit [Sorghum bicolor]
 gi|125987720|sp|A1E9T1|ATPB_SORBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|118201133|gb|ABK79503.1| ATP synthase CF1 beta subunit [Sorghum bicolor]
          Length = 498

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      +T    +   + + ++ + +++     +   +V ++  +  V    
Sbjct: 19  SVGRIDQIIGPVLDITFPPGKLPYIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|115564935|emb|CAJ70620.1| ATP synthase beta subunit [Fothergilla major]
          Length = 464

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|120609075|ref|YP_968753.1| F0F1 ATP synthase subunit beta [Acidovorax citrulli AAC00-1]
 gi|326315260|ref|YP_004232932.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|190358284|sp|A1TJ41|ATPB_ACIAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120587539|gb|ABM30979.1| ATP synthase F1 subcomplex beta subunit [Acidovorax citrulli
           AAC00-1]
 gi|323372096|gb|ADX44365.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 476

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 117/422 (27%), Positives = 193/422 (45%), Gaps = 20/422 (4%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVY 71
           E+   N  VQG  +  I +V        Q   + D +  +G  S    +V + +   +V 
Sbjct: 4   ENTQVNAGVQGKIVQCIGAVVDVEFPRDQMPKVYDALKLEG--SPLTLEVQQQLGDGVVR 61

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +G  + +  G +V + G    +       GR+++ LG PID    + + +L+  I  
Sbjct: 62  TIALGSSDGLRRGLMVSNTGNPITVPVGKATLGRIMDVLGSPIDERGPVSQ-ELTASIHR 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +      
Sbjct: 121 KAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHS 180

Query: 191 ---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
              + + VGER RE  +F  +               K  +V    +E P  R    LT +
Sbjct: 181 GLSVFAGVGERTREGNDFYHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGL 240

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 241 TIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 298

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 299 TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSR 358

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G    +      AV +   I  FL 
Sbjct: 359 QLDPQVVGEEHYQVARGVQGTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLS 417

Query: 419 QS 420
           Q 
Sbjct: 418 QP 419


>gi|7708454|emb|CAB89918.1| ATP synthase beta subunit [Jasminum polyanthum]
          Length = 473

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I         V   S  +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 2   GRIVQFIGPVLDVAFPSGKMLNIYNALVVQG--RDTVGQAINVTCEVQQLLGNNQVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|7708512|emb|CAB89963.1| ATP synthase beta subunit [Planchonella pohlmaniana]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGKPINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7688337|emb|CAB89746.1| ATP synthase beta subunit [Trema micrantha]
          Length = 443

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 7   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGVPLSVPVGGATLGR 66

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 67  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 125

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 126 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 185

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 186 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 245

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 246 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPAPATTFAHL 303

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 304 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVXEEHYETAQRVKQTLQRYKELQDIIA 363

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 364 ILGLDELSEED-RLTVARARKIERFLSQP 391


>gi|150035727|gb|ABR67209.1| ATP synthase beta subunit [Pseudosasa japonica]
          Length = 482

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 179/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQ----GKNSDNLGQVIRINLDI-VYICP 74
             G I  I      +T     +       VV      GK  +   +V ++  +  V    
Sbjct: 4   STGRIDQIIGPVLDITFPPGKLPYIYNALVVKSRDTAGKEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +   + +  I    P
Sbjct: 64  MSATEGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-INATFPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 243 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 360

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|115564939|emb|CAJ70597.1| ATP synthase beta subunit [Molinadendron sinaloense]
          Length = 467

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 425


>gi|114644226|ref|XP_509149.2| PREDICTED: ATP synthase subunit beta, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 529

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|7708518|emb|CAB89942.1| ATP synthase beta subunit [Nepenthes alata]
          Length = 483

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRIDQIIGPVLDVAFPPGKMPNIYNALVVEG--RDTAGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLMRGMEVVDTGSPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|20269424|gb|AAM17939.1| ATP synthase beta subunit [Madhuca microphylla]
          Length = 462

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 7   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGKPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 65  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 420


>gi|305671653|gb|ADM63136.1| ATP synthase beta subunit [Schefflera delavayi]
 gi|305671675|gb|ADM63147.1| ATP synthase beta subunit [Tetrapanax papyrifer]
          Length = 489

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|86136463|ref|ZP_01055042.1| ATP synthase subunit B [Roseobacter sp. MED193]
 gi|85827337|gb|EAQ47533.1| ATP synthase subunit B [Roseobacter sp. MED193]
          Length = 474

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 187/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + V       + + +V   +  + V    +   E + 
Sbjct: 6   GKITQVIGAVVDVQFEDALPEILNAVTTDNNGKNLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    +   + +  I    P   ++   
Sbjct: 66  RGQDVTDTGAPISVPVGNATLGRILNVIGEPVDEKGPVEATE-TRGIHGDAPAFADQSTA 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 TEILTTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGVSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    L+ +T+AE F     
Sbjct: 185 TREGNDLYHEMIESGVIVPENLVDSKIALVYGQMNEPPGARMRVALSGLTLAEQFRDDSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  S  + G+IT+
Sbjct: 245 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--SSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V +V V  D+  DP   +  + LD   VL+R+++E+G YP VDPL S SRL D     +E
Sbjct: 303 VQAVYVPADDLTDPAPATSFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGEE 362

Query: 370 KK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              + + +  ++ R++  +DI  I G     +     AV +   I  FL Q P D++
Sbjct: 363 HYTVATDVQQILQRYKSLQDIIAILGMDELSEDD-KLAVARARKIERFLSQ-PFDVA 417


>gi|312285237|gb|ADQ64360.1| ATP synthase beta subunit [Legnephora moorei]
          Length = 469

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 110/417 (26%), Positives = 183/417 (43%), Gaps = 28/417 (6%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGI 77
           +  I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +  
Sbjct: 2   VQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSA 59

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +
Sbjct: 60  TDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFI 118

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 119 QLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 178

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 179 GVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYF 238

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++
Sbjct: 239 RDVNEQDVLLFIDNIXRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKE 296

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 297 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPR 356

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 IVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|269819625|gb|ACZ44925.1| F1-ATPase alpha subunit [Burmannia biflora]
          Length = 377

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/380 (23%), Positives = 156/380 (41%), Gaps = 22/380 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 5   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 61

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 62  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 120

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 121 LIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 180

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 181 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 240

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 241 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 301 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVCGSSKLELAQYRE---VA 357

Query: 391 LIGGYRPGVDLILDKAVHQV 410
               +   +D      +++ 
Sbjct: 358 AFAQFGSDLDAATQALLNRG 377


>gi|261838695|gb|ACX98461.1| flagellar export protein ATP synthase [Helicobacter pylori 51]
          Length = 434

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 232/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID    L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQIGNDKELDEAIKKKALMEQFLAQDENALHPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILK 434


>gi|116327838|ref|YP_797558.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116330720|ref|YP_800438.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
 gi|116120582|gb|ABJ78625.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116124409|gb|ABJ75680.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
          Length = 454

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 148/427 (34%), Positives = 228/427 (53%), Gaps = 8/427 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICP 74
              + + G +  ++              +G+ +  Q  GK      +++     +  + P
Sbjct: 23  TETIRKSGKVIRVSGNVIYSEGP-PDSKIGELMDVQKSGKEGYLQCEIVGFEGHVYTLMP 81

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  E I     VF  GR   I       GRV+N +G+PID    +   +      + VP
Sbjct: 82  LGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDKKGHIITKEERGP-DNDVP 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++R  +     TG+R ID    +  GQR+G+F+GSG+GKS+LL M AR    D  +I+
Sbjct: 141 NPLDRPIIRDILMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIARYTNADINVIA 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           LVGERGREV EFI  D   + L+KSVV+ ATSD   + +    L A +IAEYF  +G +V
Sbjct: 201 LVGERGREVNEFIEIDLGKEGLQKSVVLAATSDAPKMEQVNCALLATSIAEYFRDQGKHV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
            L++DS+TRFA + REI+ ++ E P+ RG+ +SVFS+L +L+ER G + K  G IT   +
Sbjct: 261 NLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSG-TSKSGGTITGFYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL + D   DPIAD+VR  +DGHIVLNR LAE+  YP +D  AS+SR+  +    ++   
Sbjct: 320 VLTEADEMEDPIADAVRGYIDGHIVLNRKLAEKNHYPAIDVPASLSRVMARIAPENQNLR 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQ 431
              +  LI  ++   ++  +  Y  G D  +D A+ +   I  +LKQ   + S+     Q
Sbjct: 380 AGMIRELISVYDSAEELIRLNAYVSGSDSRVDLAIRKKDKIDRYLKQKIQERSTYSKAVQ 439

Query: 432 EITKKLQ 438
            + + L+
Sbjct: 440 GLKEILE 446


>gi|34539459|gb|AAQ74613.1| F1-ATPase alpha subunit [Thismia rodwayi]
          Length = 413

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/408 (22%), Positives = 163/408 (39%), Gaps = 20/408 (4%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V      S   G  + +  + V +   G    I  GDLV 
Sbjct: 1   VGDGIARVYGLNE-IKAGEMVEFA---SGVKGIALNLENENVGLVVFGSDTAIKEGDLVK 56

Query: 89  HWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +T
Sbjct: 57  RTGSIVDVPAGKAMLGRVVDALGIPIDGRXALSDHE-RRRVEVKAPXIIERQSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--------KVIISLVGERG 199
            ++ +D   P+  GQR  +      GK+ +      +              +   +G++ 
Sbjct: 116 XLKAVDSLVPIXRGQRELIIGDRQTGKTAIAIXTILNQKQIXLIXXXTLYCVXVXIGQKR 175

Query: 200 REVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
             V + +      N  + S++V AT+ +   L+ M P +   + EYF   G +  +I D 
Sbjct: 176 STVAQLVXILXEANALEYSILVAATASDXAPLQFMXPYSGCAMGEYFRDNGXHAXIIYDD 235

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVD 316
           +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  +   
Sbjct: 236 LSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERATKRSDQTGAGSSTALPVIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S 
Sbjct: 296 AGDSSAYIPTNVIPITDGQICLETELFYRGIIPAINVGLSVSRVGSAAQLRAMKQVRGSS 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
              + ++ E   +     +   +D      +++   + +  KQ   + 
Sbjct: 356 KLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQYEP 400


>gi|260656823|gb|ACX47802.1| ATPase [Vibrio litoralis]
          Length = 458

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/423 (22%), Positives = 176/423 (41%), Gaps = 27/423 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           ++     +  L+  V  G+ +   G         + +  D V    +G    +  G  V 
Sbjct: 1   VSDGIIRIHGLAD-VMQGEMIELPGG---LYALALNLERDSVGAVVMGPYANLQEGMKVT 56

Query: 89  HWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             GR   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +T
Sbjct: 57  GTGRILEVPVGPELLGRVVNTLGQPIDGKGPID-AKLTSPVEMIAPGVIDRKSVDQPVQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREF 205
           G + +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   
Sbjct: 116 GYKSVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANV 175

Query: 206 IEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +           ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A 
Sbjct: 176 VRKLEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAV 235

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVI 311
           + R+I+      P    +P  VF    RLLER     +E              G++TA+ 
Sbjct: 236 AYRQISLLLKRPPGREAFPGDVFYLHSRLLERASRVSEEYVEKFTNGEVKGKTGSLTALP 295

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
            +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KK
Sbjct: 296 IIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKK 355

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           L   +   + ++ E   +     +   +D    K +     + + +KQ     +   VF 
Sbjct: 356 LSGGIRTALAQYRE---LAAFAQFSSDLDAATKKQLDHGQKVTELMKQKQ--YAPFSVFD 410

Query: 432 EIT 434
           +  
Sbjct: 411 QAL 413


>gi|254581048|ref|XP_002496509.1| ZYRO0D01760p [Zygosaccharomyces rouxii]
 gi|238939401|emb|CAR27576.1| ZYRO0D01760p [Zygosaccharomyces rouxii]
          Length = 505

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/434 (26%), Positives = 189/434 (43%), Gaps = 25/434 (5%)

Query: 20  VVQGGYISSITSVYYTV----TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
               G + ++      V      L + +   +    QGK    + Q +    + V    +
Sbjct: 34  AATNGKVRAVIGAVVDVQFDQENLPEILNALEIERPQGKLVLEVAQHLG--ENTVRAIAM 91

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                +  G  V   G    +       GR+IN +G+PID    +    +   I ++ P 
Sbjct: 92  DGTSGLVRGAPVSDTGAPISVPVGKETLGRIINVIGEPIDEAGPINTT-VRRPIHAEAPS 150

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+
Sbjct: 151 FVEQSTNSEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSV 210

Query: 195 ---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              VGER RE  +   + +           K  +V    +E P  R    LT +T+AEYF
Sbjct: 211 FTGVGERTREGNDLYREMMETGVIDLKGESKVALVFGQMNEPPGARARVALTGLTVAEYF 270

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI     +K
Sbjct: 271 RDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERIA--TTQK 328

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D  
Sbjct: 329 GSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAS 388

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +     S++   +  ++  +DI  I G     +      V +   I  FL Q    
Sbjct: 389 IVGEEHYNTASNVQMTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP--- 444

Query: 424 LSSEDVFQEITKKL 437
            ++  VF  I  KL
Sbjct: 445 FATAQVFTGIEGKL 458


>gi|183206496|gb|ACC54446.1| ATP synthase beta subunit [Campanula laciniata]
          Length = 498

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|219674018|ref|YP_002456502.1| ATP synthase CF1 beta subunit [Trifolium subterraneum]
 gi|193788987|gb|ACF20583.1| ATP synthase CF1 beta subunit [Trifolium subterraneum]
          Length = 492

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 27/419 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPV 75
           G I+ I      V      +    +   + +  D++GQ I +  ++        +    +
Sbjct: 21  GRITQIIGPVLDVDFPPGKMPYI-YNALRVQGRDSVGQQINVTCEVQQLLGNNRIRAVAM 79

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V   G    +       GR+ N LG+PID    +     +  I    P 
Sbjct: 80  SATDGLKRGLEVVDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAPA 138

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 139 FVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 198

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 199 FGGVGERTREGNDLYMEMKESGVINEKKIEESKVALVYGQMNEPPGARMRVGLTALTMAE 258

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 259 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TST 316

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 317 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 376

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 377 PRIVGEEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|167588175|ref|ZP_02380563.1| ATPase FliI/YscN [Burkholderia ubonensis Bu]
          Length = 407

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 143/381 (37%), Positives = 212/381 (55%), Gaps = 12/381 (3%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF----------RISPSACWCGRVINAL 109
            +V+    + +++ P      +  G  V+   R           R+       GRV++A 
Sbjct: 15  AEVVGFAGERLFLMPTTDVAGVLPGARVWPLERAPVADPLAGAKRLPVGWDMLGRVVDAS 74

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    L    +   + +     ++R+ +      G+R I+    +  GQR+G+FAG
Sbjct: 75  GRPLDNLGPL-TSKVDAPLSAASINPLDREPIHHVLDVGVRAINALLTVGRGQRMGLFAG 133

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESP 228
           SG+GKS LL   AR    + ++I L+GERGREV+EFI +    D L +SVVV A +D SP
Sbjct: 134 SGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVAAPADVSP 193

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +LR      A  +AE+F  +G +VLL++DS+TR+A + REIA   GE P  +GYP SVF+
Sbjct: 194 LLRMQGAAYATALAEWFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFA 253

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +LP L+ER G   +  G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R+LAE G Y
Sbjct: 254 KLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHY 313

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  AS+SR             V     ++ R++  RD+  +G Y PG D  LD+A+ 
Sbjct: 314 PAIDIEASISRAMTALIDDTHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRDAQLDRAIA 373

Query: 409 QVPIIYDFLKQSPSDLSSEDV 429
             P I  FL+Q   + +  D 
Sbjct: 374 LYPHIEAFLQQGFRECAPYDA 394


>gi|167036417|ref|YP_001671648.1| F0F1 ATP synthase subunit beta [Pseudomonas putida GB-1]
 gi|189081339|sp|B0KRA8|ATPB_PSEPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166862905|gb|ABZ01313.1| ATP synthase F1, beta subunit [Pseudomonas putida GB-1]
          Length = 458

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/407 (27%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDVVPSVYNALKVQGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G D+V       +       GR+++ LG PID    +G+ +    I    P   ++
Sbjct: 60  GLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RRGIHQPAPSFADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYDTA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEDD-KQLVARARKIQRFLSQP 402


>gi|124361686|gb|ABN09285.1| ATP synthase beta subunit [Diospyros longifolia]
          Length = 459

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V+     +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVSFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910844|gb|ABI48154.1| ATPase beta subunit [Diphyscium foliosum]
          Length = 448

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 11  KGQNTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGEATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|62902851|gb|AAY19340.1| ATP synthase beta subunit [Brunellia sp. Skinner et al. 43]
          Length = 452

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 5   KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 65  IFNVLGEPIDNLGPVDTCTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+             +S+ G   ER RE  +   +             
Sbjct: 124 GLFGGAGVGKTVLIMELINIIANAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 183

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 184 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 244 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 302 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 361

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 362 ILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|329894812|ref|ZP_08270612.1| ATP synthase beta chain [gamma proteobacterium IMCC3088]
 gi|328922706|gb|EGG30040.1| ATP synthase beta chain [gamma proteobacterium IMCC3088]
          Length = 465

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D ++ + K      Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDEVPQVYDALLVEEKGLTLEVQ-QQLGDGVVRAIAMGSSE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S G  V +     ++       GR+++ LG PID    +G+ +    I  K P     
Sbjct: 60  GVSRGLPVTNTKAPIQVPVGIATLGRIMDVLGNPIDEKGPIGEEE-RASIHRKAPTYEEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              E+  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 AASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYYEMQESKVVDVENFTNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +    G+I
Sbjct: 239 EGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTRVGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     
Sbjct: 297 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLVG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +       +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QEHYNAARGVQTVLQRYKELKDIIAILGMDELSEED-KLIVDRARKIERFLSQP 409


>gi|302567343|gb|ADL41370.1| ATP synthase B subunit [Parallela novae-zelandiae]
          Length = 401

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +G  + S+ I
Sbjct: 10  VRAVSMNPTDGLMRGMEVIDTGTPLTVPVGKATLGRIFNVLGEPVDNLGPVGNQE-SLPI 68

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 69  HRPAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 128

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 129 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 188

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 189 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 248

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 249 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 306

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 307 TSTMLQPWIVGEKHYETAQNVKRTLQRYKELQDIIAILGLDELSEED-RLVVARARKIER 365

Query: 416 FLKQS 420
           FL Q 
Sbjct: 366 FLSQP 370


>gi|170178348|gb|ACB10593.1| ATP synthase beta subunit [Cornus nuttallii]
          Length = 454

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|190345407|gb|EDK37286.2| ATP synthase beta chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/424 (26%), Positives = 190/424 (44%), Gaps = 21/424 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           I ++  V+Y    L          +  G  +  L     +  + V    +   E +  G 
Sbjct: 29  IGAVVDVHYEDGNL--PAIFNALTLKNGDQNLVLEVAQHLGENTVRTIAMDGTEGLVRGA 86

Query: 86  LVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
            V   G    +       GR+IN +G+PID    + +      I ++ P  + +    + 
Sbjct: 87  SVTDTGAPISVPVGRGTLGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEV 145

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGER RE
Sbjct: 146 LETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTRE 205

Query: 202 VREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
             +   +         +   K  +V    +E P  R    LT +TIAEYF  +   +VLL
Sbjct: 206 GNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLL 265

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V 
Sbjct: 266 FVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVY 323

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D      +   + 
Sbjct: 324 VPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVA 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           S++   +  ++  +DI  I G     +      V +   I  FL Q     +  +VF  I
Sbjct: 384 SNVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIERFLSQP---FAVAEVFTGI 439

Query: 434 TKKL 437
           + KL
Sbjct: 440 SGKL 443


>gi|56675703|emb|CAB65474.2| ATP synthase beta subunit [Titanotrichum oldhamii]
          Length = 496

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +G  I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGXPINVTCEVQPLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20269418|gb|AAM17936.1| ATP synthase beta subunit [Heliamphora sp. Anderberg s.n.]
          Length = 449

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|5758862|gb|AAD50836.1| ATP synthase beta subunit [Chlorophytum comosum]
          Length = 495

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|4063564|gb|AAC98340.1| ATP synthase beta subunit [Schinus molle]
          Length = 456

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVGQTINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIS 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|37729410|gb|AAN71671.1| ATP synthase beta subunit [Alnus viridis subsp. sinuata]
          Length = 469

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|257852974|gb|ACV71498.1| ATP synthase beta subunit [Trigoniastrum hypoleucum]
          Length = 486

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVDFPPGKLPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|229033937|ref|ZP_04188891.1| ATP synthase subunit beta [Bacillus cereus AH1271]
 gi|228728363|gb|EEL79385.1| ATP synthase subunit beta [Bacillus cereus AH1271]
          Length = 469

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|155029311|dbj|BAF75539.1| ATP synthase beta subunit [Paranecepsia alchorneifolia]
          Length = 486

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|157377616|ref|YP_001476216.1| F0F1 ATP synthase subunit beta [Shewanella sediminis HAW-EB3]
 gi|189081347|sp|A8G1W5|ATPB_SHESH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157319990|gb|ABV39088.1| ATP synthase F1, beta subunit [Shewanella sediminis HAW-EB3]
          Length = 458

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G +  +      V      V      V+      + G V+     +   +V    +G
Sbjct: 1   MSTGTVVQVIGAVVDVEFPHDAVPQ----VYDALEIKSEGLVLEVQQQLGGGVVRTIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+P+D    +G+ D    I  + P  
Sbjct: 57  SSDGLRRGLEVVNSGSPITVPVGEKTLGRIMNVLGEPVDEAGPIGEED-RYVIHREAPSY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + 
Sbjct: 116 EDQSSSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVF 175

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 AGVGERTREGNDFYYEMEDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + + +   + R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 354 DVATGVQTQLQRYKELKDIIAILGMDELSDDD-KTTVFRARKIEKYLSQP 402


>gi|149007585|ref|ZP_01831220.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP18-BS74]
 gi|147760944|gb|EDK67914.1| F0F1 ATP synthase subunit alpha [Streptococcus pneumoniae
           SP18-BS74]
          Length = 454

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 98/398 (24%), Positives = 170/398 (42%), Gaps = 13/398 (3%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGR 104
           G+ +  +  +    G    +    V I  +G   +I  GD +   G+   +       GR
Sbjct: 3   GELLNFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGESLIGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+  GQR 
Sbjct: 60  VVDPLGRPVDGLGEI-HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
            +      GK+T+   ++  + D     I   +G++   VR  +E          ++VV 
Sbjct: 119 LIIGDRQTGKTTIAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDYTIVVT 178

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P    
Sbjct: 179 ASASQPSPLLFLAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREA 238

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I L 
Sbjct: 239 FPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLG 298

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P +D  +SVSR+   A     KK+  +L   +  + E         +   +
Sbjct: 299 DGLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFGSDL 355

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           D      +++     + LKQ        +    I   L
Sbjct: 356 DAATQAKLNRGRRTVEVLKQPVHKPLPVEKQVTILYAL 393


>gi|119367998|dbj|BAF40482.1| ATP synthase beta subunit [Irvingia malayana]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7687958|emb|CAB89701.1| ATP synthase beta subunit [Astilbe taquetii]
          Length = 498

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708558|emb|CAB89954.1| ATP synthase beta subunit [Pouteria macrantha]
          Length = 485

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +G+ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 40  KGRDTVGKPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 219 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|3850902|gb|AAC72143.1| ATP synthase beta subunit [Placospermum coriaceum]
          Length = 490

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D          +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGP-XXXRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62085175|gb|AAX62992.1| ATP synthase beta subunit [Pera bicolor]
          Length = 482

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHKAAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 419


>gi|295109103|emb|CBL23056.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus obeum A2-162]
          Length = 464

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +     +   L + +  +   +    +V  +I  D+V    +   + +
Sbjct: 7   GEVVQVIGPVLDIRFAHDELPALLNAIEIESDGAKLTAEVAQQIGDDVVRCIAMNSTDGL 66

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   V   G   +       GRV N LG+P+D   +  +      I    P    +  
Sbjct: 67  VRGTKAVDTGGPITVPVGDVCLGRVFNLLGEPVDNQPA-PEAKERWSIHRPAPSYEEQMP 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 126 ATEILETGIKVVDLICPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF  +   +VLL 
Sbjct: 186 RTREGNDLYNEMKESGVIDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  S LD   VL+R ++ +G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFSHLDATTVLSREISSQGIYPAVDPLDSTSRILSPEIVGTEHYEIAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           S+  ++ R++E +DI  I G     +    + V +   +  +L QS
Sbjct: 364 SVQRVLQRYKELQDIIAIMGMDELSEDD-KRTVSRARKVQRYLSQS 408


>gi|163856455|ref|YP_001630753.1| flagellar biosynthesis ATPase FliI [Bordetella petrii DSM 12804]
 gi|163260183|emb|CAP42485.1| flagellar biosynthesis ATPase FliI [Bordetella petrii]
          Length = 482

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 153/457 (33%), Positives = 228/457 (49%), Gaps = 31/457 (6%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S    +  G I   T +    T L   V     + + +G +     +V+  +   +
Sbjct: 21  IRAASTEPWLASGRIIRATGLVLHATGLRLPVGAACRIEIARGHDHWADAEVVGFDGHTL 80

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 81  YLMPQADISGLPPGARVVPGEPPVQRAIPLPRRAELNGNAKPQLGRHLPVGNALLGRVLD 140

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG   L   +L+  + +     ++R  ++     G+R I+    +  GQR+G+F
Sbjct: 141 GAGRPLDGLGPLTGAELA-PLSAHPINPLSRAPIDTVLDVGVRAINGLLTVGRGQRMGLF 199

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFI  +   D L +SVVV A +D 
Sbjct: 200 AGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKEFIEHNLGADGLARSVVVAAPADV 259

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SV
Sbjct: 260 SPLLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSV 319

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F+ LP L+ER G        + G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R L
Sbjct: 320 FARLPALVERAGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHL 379

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      S  +  +V      + R++  RD+  +G Y  G D  
Sbjct: 380 AEAGHYPAIDIEASISRAMTSLISDQQYAVVRRFKQTLSRYQRNRDLIAVGAYSAGNDPQ 439

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSED-VFQEITKKLQ 438
           LD A+ + P +  FL+Q   D  S D    ++    +
Sbjct: 440 LDDAIARYPRLEAFLQQDIGDSVSYDAAVDQLRAAFE 476


>gi|124112038|ref|YP_001019150.1| CF1 beta subunit of ATP synthase [Chlorokybus atmophyticus]
 gi|190358288|sp|Q19V65|ATPB_CHLAT RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|124012154|gb|ABD62170.2| CF1 beta subunit of ATP synthase [Chlorokybus atmophyticus]
          Length = 485

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           GYI+ I      V     +   + + ++  GKN          +V ++  D  V    + 
Sbjct: 13  GYITQIIGPVMDVKFSPGKMPNIYNALIVNGKNEAGDEISVTCEVQQLLGDNKVRAISMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     ++ I    P  
Sbjct: 73  GTDGLMRGMEVLDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPV-ANKSTLPIHRDPPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 TELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  ++               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYQEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 252 FRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 WIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61968271|gb|AAX57062.1| ATP synthase beta subunit [Margaritaria discoidea]
 gi|61968273|gb|AAX57063.1| ATP synthase beta subunit [Margaritaria rhomboidalis]
          Length = 479

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINMTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|4995856|emb|CAB44275.1| H(+)-transporting ATP synthase [Sparrmannia ricinocarpa]
          Length = 480

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 31/420 (7%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G     +GQ I +  ++        V    
Sbjct: 8   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG----RVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|14718009|gb|AAK72746.1| ATP synthase beta subunit [Cleome hassleriana]
          Length = 498

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLTRGMEVIDMGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|66276257|gb|AAY44143.1| ATP synthase beta subunit [Begonia herbacea]
          Length = 479

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGTTLGR 91

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 92  IFNVLGEPIDNFGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 150

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 151 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 211 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 271 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 329 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 388

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 389 ILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|11465583|ref|NP_045025.1| ATP synthase CF1 beta subunit [Cyanidium caldarium]
 gi|14547924|sp|Q9TM41|ATPB_CYACA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|6466439|gb|AAF13020.1|AF022186_194 unknown [Cyanidium caldarium]
          Length = 490

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/431 (26%), Positives = 186/431 (43%), Gaps = 21/431 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL-GQVIR 64
            L Q  +  +   V   G +  I      +     Q   + + +     N++ +  +V +
Sbjct: 5   QLKQKQKTLAIAKVNNKGKVIQIIGPVLDIVFPDGQLPKVFNAIKINNSNNNWITCEVQQ 64

Query: 65  INLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +  D  V    +   E +  G      G    I       GR+ N LG+PID    +   
Sbjct: 65  LLGDNKVRAVAMSTTEGLKRGASAIDTGEPISIPVGKETLGRIFNVLGEPIDEKGPVISN 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D  + I    P     +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    
Sbjct: 125 D-KLPIHRPAPKFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELI 183

Query: 183 RSDCFDKVIISLVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILR 231
            +       +S+ G   ER RE  +  ++     +         K  +     +E P  R
Sbjct: 184 NNVAKAHGGVSVFGGVGERTREGNDLYQEMKESGVINEKDLNLSKVALCYGQMNEPPGAR 243

Query: 232 KMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+
Sbjct: 244 MRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEM 303

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +    G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP 
Sbjct: 304 GALQERI--TSTLDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPA 361

Query: 351 VDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S S +      +DE       +   + R++E +DI  I G     +      V +
Sbjct: 362 VDPLDSTSTMLQPGIVSDEHYTTARKVKETLQRYKELQDIIAILGLDELSEED-RLIVSR 420

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 421 ARKIEKFLSQP 431


>gi|123325721|gb|ABM74485.1| ATP synthase beta subunit [Toona ciliata]
          Length = 466

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 150 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+ +AEYF      +VLL +D+I RF  +  E++  
Sbjct: 210 ESKVALVYGQMNEPPGARMRVGLTALAMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|186886299|gb|ACC93552.1| ATPase F1 alpha subunit [Juncus subnodulosus]
          Length = 355

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 2   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 62  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 120

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   VG++   V + ++     N    SV+V AT
Sbjct: 121 TAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANALDYSVLVAAT 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 181 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 240

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 241 GDVFYLHSRLLERASKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 300

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 301 LFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 352


>gi|146419503|ref|XP_001485713.1| ATP synthase beta chain, mitochondrial precursor [Meyerozyma
           guilliermondii ATCC 6260]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/424 (26%), Positives = 190/424 (44%), Gaps = 21/424 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85
           I ++  V+Y    L          +  G  +  L     +  + V    +   E +  G 
Sbjct: 29  IGAVVDVHYEDGNL--PAIFNALTLKNGDQNLVLEVAQHLGENTVRTIAMDGTEGLVRGA 86

Query: 86  LVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
            V   G    +       GR+IN +G+PID    + +      I ++ P  + +    + 
Sbjct: 87  SVTDTGAPISVPVGRGTLGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEV 145

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201
            +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGER RE
Sbjct: 146 LETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTRE 205

Query: 202 VREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
             +   +         +   K  +V    +E P  R    LT +TIAEYF  +   +VLL
Sbjct: 206 GNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLL 265

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V +V 
Sbjct: 266 FVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVY 323

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D      +   + 
Sbjct: 324 VPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVA 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           S++   +  ++  +DI  I G     +      V +   I  FL Q     +  +VF  I
Sbjct: 384 SNVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIERFLSQP---FAVAEVFTGI 439

Query: 434 TKKL 437
           + KL
Sbjct: 440 SGKL 443


>gi|51246511|ref|YP_066395.1| flagellum-specific ATP synthase (FliI) [Desulfotalea psychrophila
           LSv54]
 gi|50877548|emb|CAG37388.1| probable flagellum-specific ATP synthase (FliI) [Desulfotalea
           psychrophila LSv54]
          Length = 434

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 152/425 (35%), Positives = 228/425 (53%), Gaps = 11/425 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPV 75
           N +   G ++ I  +   V     +  +G           S   G+V+      V + P+
Sbjct: 12  NTIKVWGKVTKIVGLV--VEGHCPHASIGSLCEISPVDHGSPIFGEVVGFRDGKVLLMPL 69

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    +  G L+        +       GRVI+ +  P D      +    +E+ +  P 
Sbjct: 70  GELRGLGAGSLIRVIRQSATMRVGPHLLGRVIDGMEVPQDTLPP-PELSEEVELYALPPN 128

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            M R  + +    G+R I+       GQR+G+ AGSG+GKS LL M A+    D  +I+L
Sbjct: 129 PMLRDNICQPIDLGVRAINGLLTCGLGQRMGIMAGSGVGKSVLLGMMAKYAQADINVIAL 188

Query: 195 VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREVREFI  D   + L +SV+VV TSD+SP+LR      A  IAE+F  +G NVL
Sbjct: 189 IGERGREVREFIERDLGPEGLARSVIVVVTSDQSPLLRMRGAFVATAIAEFFCKQGKNVL 248

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TRFA ++REI    GE P  +GY  SVF+ LP+LLER G  + + G+IT + +V
Sbjct: 249 LMMDSVTRFAMAMREIGLAIGEPPTTKGYTPSVFATLPKLLERAGRFKGQ-GSITGIYTV 307

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LVDGD+  +P+ADSVRSILDGHIVL+R++A +  +P +D LAS SR+     S +  +L 
Sbjct: 308 LVDGDDMTEPVADSVRSILDGHIVLSRAIAAKNHFPAIDILASASRVMRDIVSPEHIELA 367

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             L  ++  + E  D+  IG Y  G +  +D A+ ++     FLKQ  +  +      E 
Sbjct: 368 GKLRTVLADYREAEDLINIGAYVKGTNKNIDLAIEKIEQAKLFLKQGYNQTTD---MTET 424

Query: 434 TKKLQ 438
            ++L+
Sbjct: 425 LEQLE 429


>gi|139388917|ref|YP_001123644.1| ATP synthase CF1 beta subunit [Lepidium virginicum]
 gi|190358676|sp|A4QLB3|ATPB_LEPVR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134286847|dbj|BAF50468.1| ATPase beta subunit [Lepidium virginicum]
          Length = 502

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 25  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 82

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 83  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTKAPIHKSAP 141

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 142 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 201

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 202 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 261

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 262 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 319

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 320 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 379

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 380 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 438


>gi|113910812|gb|ABI48138.1| ATPase beta subunit [Frullania dilatata]
          Length = 463

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 25  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLTVPVGEATLGRIFNVLG 84

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +   + +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 85  EPVDNLGPVD-ANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 143

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 144 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISDSKVAL 203

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 204 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 263

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 264 AVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 321

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 322 SRGLASKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 381

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 382 LSEED-RLTVARARKIERFLSQP 403


>gi|7708572|emb|CAB89974.1| ATP synthase beta subunit [Rhabdodendron amazonicum]
          Length = 487

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 179/422 (42%), Gaps = 31/422 (7%)

Query: 23  GGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYI 72
            G I+ I      V      +       VV   K  D  GQ I +  ++        V  
Sbjct: 13  SGRIAQIIGPVLDVAFPPGKMPYIYNALVV---KGRDTAGQPINVTCEVQQLLGNNRVRA 69

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I   
Sbjct: 70  VAMSATDGLMRGMEVIDTGVPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRS 128

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 129 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 188

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 189 VSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALT 248

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 249 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 306

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 307 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 366

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 367 MLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLS 425

Query: 419 QS 420
           Q 
Sbjct: 426 QP 427


>gi|124361678|gb|ABN09281.1| ATP synthase beta subunit [Diospyros guianensis]
          Length = 465

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V+     +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVSFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|42559030|gb|AAS20201.1| ATP synthase beta subunit [Strelitzia reginae]
          Length = 478

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPIDNLGPVDTSTTS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEKNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|32526543|emb|CAD39203.1| ATP synthase subunit B [Pennantia cunninghamii]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7688339|emb|CAB89742.1| ATP synthase beta subunit [Trigonobalanus verticillata]
 gi|14718050|gb|AAK72766.1| ATP synthase beta subunit [Trigonobalanus verticillata]
          Length = 490

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      VT     +       VV   K  D  GQ I +  ++        V   
Sbjct: 19  GRIAQIIGPVLDVTFPPGKMPNIYNALVV---KXRDTAGQQINVTCEVQQLLGNNRVRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 76  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 135 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 313 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 372

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 373 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|8050870|gb|AAF71787.1|AF266738_1 ATP synthase beta subunit [Arbutus unedo]
          Length = 494

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 177/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 46  KGRDTVGQPINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 105

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +  +     F+TGI+V+D+  P   G +I
Sbjct: 106 IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIELETKLSIFETGIKVVDLLAPYRRGGKI 164

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 165 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYREMKESGVINEQNIA 224

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 225 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 284

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 285 LGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 342

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +  +    D   K+   +   + R++E +DI  
Sbjct: 343 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQRWIVGDEHYKIAQRVKQTLQRYKELQDIIT 402

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 403 ILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|159466892|ref|XP_001691632.1| beta subunit of mitochondrial ATP synthase [Chlamydomonas
           reinhardtii]
 gi|584796|sp|P38482|ATPBM_CHLRE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|18123|emb|CAA43808.1| H(+)-transporting ATP synthase [Chlamydomonas reinhardtii]
 gi|158278978|gb|EDP04740.1| beta subunit of mitochondrial ATP synthase [Chlamydomonas
           reinhardtii]
          Length = 574

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 186/413 (45%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           G++S +      V    +   +   +  QG N   + +V +   D  V    +   + + 
Sbjct: 38  GFVSQVIGPVVDVRFDGELPSILSALEVQGHNVRLVLEVAQHMGDNTVRCVAMDSTDGLV 97

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G   ++       GR++N +G+P+D    +   ++   I  + P    +   
Sbjct: 98  RGQKVVNTGSPIKVPVGRGTLGRIMNVIGEPVDEQGPIECSEV-WSIHREAPEFTEQSTE 156

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 157 QEILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 216

Query: 199 GREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
            RE  +   + +              K  +V    +E P  R    LT +T+AEYF    
Sbjct: 217 TREGNDLYREMIESGVIKLGDKRGESKCTLVYGQMNEPPGARARVALTGLTVAEYFRDVE 276

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT
Sbjct: 277 GQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSIT 334

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +      
Sbjct: 335 SVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLNPNIIGA 394

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 395 EHYNIARGVQKVLQDYKNLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 446


>gi|323493125|ref|ZP_08098256.1| flagellum-specific ATP synthase FliI [Vibrio brasiliensis LMG
           20546]
 gi|323312596|gb|EGA65729.1| flagellum-specific ATP synthase FliI [Vibrio brasiliensis LMG
           20546]
          Length = 447

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 148/427 (34%), Positives = 235/427 (55%), Gaps = 7/427 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
           S  +    G +  +  +      +     L    + +    D +  QV+  +  I Y+ P
Sbjct: 23  SIPVARVTGRLVKVNGLMLQ--AVGCRFKLEQRCLVETAEGDMIEAQVVGFDHTIAYLMP 80

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V    G   +  S  W GRV+N LG+ +D   +L  G+  + +     
Sbjct: 81  IRRLGGLFAGAKVIPLQGDSTVQLSDQWLGRVLNGLGEAMDDGPALQGGE-RVSLDPTPI 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R+ V+     G+R I+    +  GQRIG+ AGSG+GKS L+ M +++   D +++ 
Sbjct: 140 NPLKRRPVDSPLNVGVRAINGLMTVGKGQRIGLMAGSGVGKSVLMGMISQNTEADVIVVG 199

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREFI  +   +  KK++++ A +DESP++R  A L    ++EYF  KG +V
Sbjct: 200 LIGERGREVREFIERNLTEEARKKAIIIAAPADESPLMRLRATLLCHRVSEYFRDKGKDV 259

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TR+A + REIA + GE P +RGYP SVF+ LP+LLER G S  + G++TA+ +
Sbjct: 260 LLMMDSLTRYAMAQREIALSLGEPPASRGYPPSVFNVLPQLLERAGNSANQDGSLTAIYT 319

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +L  GD+  DP+ DS R+ILDGH+VL+R LAE+G YP +D  ASVSR            L
Sbjct: 320 ILAAGDDQQDPVVDSARAILDGHVVLSRKLAEQGHYPAIDINASVSRCMTACSQPAHLTL 379

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQ 431
            S        + + +++  +GGY+PG D  LD++V   P +  +L+QS    +  +    
Sbjct: 380 ASEFRKTYASYLQVKELLPLGGYQPGQDPELDRSVALYPQLVAYLQQSQHCSVDYQQSLT 439

Query: 432 EITKKLQ 438
           E+ +  Q
Sbjct: 440 ELAQLFQ 446


>gi|223043982|ref|ZP_03614023.1| ATP synthase F1, beta subunit [Staphylococcus capitis SK14]
 gi|314934172|ref|ZP_07841533.1| ATP synthase F1, beta subunit [Staphylococcus caprae C87]
 gi|222442697|gb|EEE48801.1| ATP synthase F1, beta subunit [Staphylococcus capitis SK14]
 gi|313653077|gb|EFS16838.1| ATP synthase F1, beta subunit [Staphylococcus caprae C87]
          Length = 470

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            +++  D+V    +   + +  G  V   G+   +       GRV N LG+ ID D+ + 
Sbjct: 48  ALQLGDDVVRTIAMDSTDGVQRGMEVKDTGKDISVPVGDATLGRVFNVLGETIDLDEKID 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 DSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R    L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 SGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  S   KG++T++ +V V  D++ DP   +  + LD    L R L E G YP VDPLA
Sbjct: 288 RI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR L       D   +   +   + ++ E +DI  I G     D    + V +   I 
Sbjct: 346 STSRALEPSIVGQDHYDVAREVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|242023574|ref|XP_002432207.1| ATP synthase subunit beta, putative [Pediculus humanus corporis]
 gi|212517604|gb|EEB19469.1| ATP synthase subunit beta, putative [Pediculus humanus corporis]
          Length = 550

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 195/430 (45%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I ++      V        + + +    ++   + +V   +  + V    +   E 
Sbjct: 82  TSGKIVAVIGAVVDVQFDENLPAILNALEVSNRSPRLILEVAQHLGENTVRTIAMDGTEG 141

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V   G   RI   A   GR++N +G+PID    + K D    I ++ P  ++  
Sbjct: 142 LVRGQVVTDTGYPIRIPVGAETLGRIMNVIGEPIDERGPI-KTDKFAAIHAEAPEFVDMS 200

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 201 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 260

Query: 197 ERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  + 
Sbjct: 261 ERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQE 320

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT
Sbjct: 321 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSIT 378

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      
Sbjct: 379 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGA 438

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q        
Sbjct: 439 EHYNIARGVQKILQDYKSLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP---FQVA 494

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 495 EVFTGHAGKL 504


>gi|195183524|dbj|BAG66975.1| ATP synthase beta subunit [Melicytus novae-zelandiae]
 gi|195468867|dbj|BAG66973.1| ATP synthase beta subunit [Melicytus latifolius]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFVQLETKLLIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|155029345|dbj|BAF75556.1| ATP synthase beta subunit [Hevea brasiliensis]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119367970|dbj|BAF40446.1| ATP synthase beta subunit [Agrostistachys borneensis]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVVDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718015|gb|AAK72749.1| ATP synthase beta subunit [Coccoloba uvifera]
          Length = 469

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 2   GRVAQIIGPXLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 297 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYKTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|14718165|gb|AAK72821.1| ATP synthase beta subunit [Pedicularis coronata]
          Length = 496

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTIGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|20269406|gb|AAM17930.1| ATP synthase beta subunit [Diapensia lapponica]
          Length = 470

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      VT    +   + + +V Q  + D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVTFPPGKMPNIYNALVVQ--SRDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRAAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPWILGEEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQP 434


>gi|5758879|gb|AAD50853.1| ATP synthase beta subunit [Eucharis x grandiflora]
          Length = 496

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G      G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEAIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085139|gb|AAX62975.1| ATP synthase beta subunit [Hirtella bicornis]
          Length = 482

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|323715472|gb|ADY04804.1| ATP synthase beta subunit [Hydrangea arborescens]
          Length = 496

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLCPVDTGTTS-PIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|282878917|ref|ZP_06287681.1| ATP synthase F1, alpha subunit [Prevotella buccalis ATCC 35310]
 gi|281298916|gb|EFA91321.1| ATP synthase F1, alpha subunit [Prevotella buccalis ATCC 35310]
          Length = 529

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/444 (22%), Positives = 171/444 (38%), Gaps = 37/444 (8%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L QL+   S N   + G + ++      V  L Q     + +  +      +  V+ +  
Sbjct: 15  LQQLSGVSSDNQFEETGTVLNVGDGVARVYGL-QNAEANELLEFENG---VMAIVMNLEE 70

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LS 125
           D V    +G    I  G +V    R   I  +    GRVIN LG+ IDG   L   +   
Sbjct: 71  DNVGCILLGSSSAIKEGMVVKRTHRIASIRVNDNMLGRVINPLGEAIDGLGELDLTESFE 130

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M +  K P  + RQ V++  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 131 MPLDRKAPGVIYRQPVKEPLQTGLKSVDSMIPIGRGQRELIIGDRQTGKTAIAVDTIINQ 190

Query: 186 CF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
                       I   +G++   V   ++          S++V AT+ +   ++  AP  
Sbjct: 191 KSFYDAGKPVYCIYVAIGQKASTVANLVQTLKERGALPYSIIVSATAADPAAMQYYAPFA 250

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              I EYF  +G++ L++ D +++ A + REI+           YP  VF    RLLER 
Sbjct: 251 GAAIGEYFRDRGESALVVYDDLSKQAVAYREISLILRRPSGREAYPGDVFYLHSRLLERA 310

Query: 298 GPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
                +                     G++TA+  +     + +  I  +V SI DG I 
Sbjct: 311 ARINDQQEVAEQMNDLPECLKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIY 370

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L  +L  +G  P V+   SVSR+   A     KK+  +L     ++ E         +  
Sbjct: 371 LESNLFNQGFRPAVNVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKFSS 427

Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421
            +D +    + +       L Q  
Sbjct: 428 DMDSVTAMTLDRGRKNNQLLIQPQ 451


>gi|170178346|gb|ACB10592.1| ATP synthase beta subunit [Cornus florida]
          Length = 445

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|169142694|ref|YP_001687121.1| ATP synthase beta subunit [Oenothera argillicola]
 gi|190358690|sp|B0Z4L0|ATPB_OENAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|159792932|gb|ABW98688.1| ATP synthase beta subunit [Oenothera argillicola]
          Length = 498

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 20  SGRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTGGQEINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPGIVGDEHYETAQRVKETLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|114509184|gb|ABI75160.1| ATPase alpha subunit [Baldellia ranunculoides]
          Length = 361

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 161/365 (44%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L +    G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGLKEIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGNDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P   C  GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKCLLGRVVDALGVPIDGKGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNQKAKENDKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|118917332|dbj|BAF40450.1| ATP synthase beta subunit [Chrozophora oblongifolia]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708161|emb|CAB90022.1| ATP synthase beta subunit [Barbacenia elegans]
          Length = 485

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLNMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|6689004|emb|CAB65366.1| ATP synthase beta subunit [Panax quinquefolius]
          Length = 498

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KDRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257853484|gb|ACV71744.1| ATP synthase beta subunit [Manihot grahamii]
          Length = 487

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|241953968|ref|XP_002419705.1| ATP synthase subunit beta, mitochondrial precursor, putative; F1F0
           ATP synthase beta subunit, putative [Candida
           dubliniensis CD36]
 gi|223643046|emb|CAX41920.1| ATP synthase subunit beta, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 504

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/432 (25%), Positives = 187/432 (43%), Gaps = 21/432 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
               G + ++      V          L    +  G     L     +  + V    +  
Sbjct: 33  AAAHGKVRAVIGAVVDVQFDEGNLPAILNALTLKNGDQDLVLEVAQHLGENTVRAIAMDG 92

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GR+IN +G+PID    +   +    I ++ P  +
Sbjct: 93  TEGLVRGTEVNDTGAPISVPVGRGTLGRIINVVGEPIDDRGPIECKEKK-PIHAEPPSFV 151

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
            +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+  
Sbjct: 152 EQSTAAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFT 211

Query: 195 -VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  
Sbjct: 212 GVGERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRD 271

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+
Sbjct: 272 EEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGS 329

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A  
Sbjct: 330 VTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVV 389

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   + + +   +  ++  +DI  I G     +      V +   I  FL Q     +
Sbjct: 390 GQEHYDVATGVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP---FA 445

Query: 426 SEDVFQEITKKL 437
             +VF  I  +L
Sbjct: 446 VAEVFTGIPGRL 457


>gi|183206494|gb|ACC54445.1| ATP synthase beta subunit [Campanula pelviformis]
          Length = 497

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLTVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|156530141|gb|ABU75167.1| AtpB [Holacantha emoryi]
          Length = 475

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I  + P
Sbjct: 61  MSATDGLRRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKRAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|114509186|gb|ABI75161.1| ATPase alpha subunit [Blyxa aubertii]
          Length = 362

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 162/366 (44%), Gaps = 19/366 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V     +S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEF---SSGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SLG  +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKSLLGRVVDALGVPIDGRGSLGDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAKENEKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   +
Sbjct: 296 SAYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|111283708|gb|ABH09204.1| ATPase beta subunit [Jackiella curvata]
          Length = 444

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G++ +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 34  GQDINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 93

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID    +   + +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 94  EPIDNLGPVD-VNTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 152

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 153 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 212

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P 
Sbjct: 213 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLSFIDNIFRFVQAGSEVSALLGRMPS 272

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 273 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 331 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 390

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 391 LSEED-RLTVARARKIERFLSQP 412


>gi|115401284|ref|XP_001216230.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114190171|gb|EAU31871.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 500

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/448 (25%), Positives = 192/448 (42%), Gaps = 23/448 (5%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV 62
            L  L  LA   S +  V  G I  +      V    + +  + + +  +      + +V
Sbjct: 28  KLNGLPSLARFASTDSSV--GKIHQVIGAVVDVKFEGEKLPAILNAIETENNGQKLVLEV 85

Query: 63  -IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
              +  ++V    +   E ++ G      G    I       GR++N  G PID    + 
Sbjct: 86  SQHLGENVVRTIAMDGTEGLTRGAAARDTGAPITIPVGPGTLGRILNVTGDPIDERGPV- 144

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           K    + I ++ PP   +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +  
Sbjct: 145 KATTYLPIHTEAPPFTEQSTEAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQE 204

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILR 231
              +         +   VGER RE  +   +         D   K  +V    +E P  R
Sbjct: 205 LINNIAKAHGGYSVFCGVGERTREGNDLYHEMQETGVIQLDGESKVSLVFGQMNEPPGAR 264

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++
Sbjct: 265 ARVALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDM 324

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP 
Sbjct: 325 GGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPA 382

Query: 351 VDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+ D      +     + +  ++  ++  +DI  I G     +      V +
Sbjct: 383 VDPLDSKSRMLDARIVGQEHYDTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVER 441

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              +  FL Q     +   VF  I  KL
Sbjct: 442 ARKLQRFLSQP---FTVAQVFTGIEGKL 466


>gi|323715486|gb|ADY04811.1| ATP synthase beta subunit [Jamesia americana]
          Length = 484

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAKSKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP +DPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAIDPLDSTSTML 364

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRVVGEGHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|319778925|ref|YP_004129838.1| ATP synthase beta chain [Taylorella equigenitalis MCE9]
 gi|317108949|gb|ADU91695.1| ATP synthase beta chain [Taylorella equigenitalis MCE9]
          Length = 467

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +S G  V        +       GR+++ LG+PID    + + +
Sbjct: 54  LGDGVVRTIALGSSDGLSRGMPVERTNAPISVPVGNGTLGRIMDVLGRPIDEAGPI-EHE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 EKRSIHQPAPKFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 172

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 173 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESNVLDKVAMVFGQMNEPPGNRLRVALTGL 232

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++LL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 233 TMAEKFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 290

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 291 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSSSR 350

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +  ++   + R+++ RDI  I G          + V +   I  FL 
Sbjct: 351 QLDPHVVGEEHYSVARAVQQTLQRYKDLRDIIAILGMDELS-PEDKQTVARARKIQRFLS 409

Query: 419 QS 420
           Q 
Sbjct: 410 QP 411


>gi|61968265|gb|AAX57059.1| ATP synthase beta subunit [Lingelsheimia sp. Rabenantoandro et al.
           1115]
          Length = 479

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I+ I      V     Q   + + +V +G+++D        +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQDTDGQQIHVTCEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|8452711|emb|CAB89950.2| ATP synthase beta subunit [Opilia sp. Chase 1902]
          Length = 481

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 51  GRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTGAPLSVPVGEATLGRI 110

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    PP +        F+TGI+V+D+  P   G +IG
Sbjct: 111 FNVLGEPVDNLGPVD-TRTTSPIHRSAPPFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 169

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 170 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINXXNIAE 229

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 230 SKVALVYGQMNEPPGARMRXGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVSALL 289

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 290 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 347

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 348 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 407

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 408 LGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6706141|emb|CAB65901.1| ATP synthase beta subunit [Convolvulus arvensis]
          Length = 490

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMAVINTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|86609936|ref|YP_478698.1| F0F1 ATP synthase subunit beta [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|118573768|sp|Q2JIV9|ATPB_SYNJB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|86558478|gb|ABD03435.1| ATP synthase F1, beta subunit [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 477

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/419 (26%), Positives = 191/419 (45%), Gaps = 18/419 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLG-----QVIRINLDI 69
           +       GYI+ +          S  +  + + +  +G     L      +V ++  D 
Sbjct: 4   ATATATNVGYITQVIGPVIDAEFPSGKLPEIYNALKVEGTTESGLKVNVTFEVQQLLGDN 63

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G    +       GR+ N LG+P+D  + +   + +  
Sbjct: 64  RVRAVAMSSTDGLVRGMPVVDTGAPITVPVGQPTLGRIFNVLGEPVDQGEPVQAQEFA-P 122

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    PP ++     + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   
Sbjct: 123 IHRSAPPLVDLTIKPEPFETGIKVIDLLAPFKKGGKVGLFGGAGVGKTVLIQELIHNIAE 182

Query: 188 DKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +   +     +  K  +V    +E P  R    LTA+T+AE
Sbjct: 183 EHSGLSVFAGVGERTREGNDLYNEMKESGVLDKVALVYGQMNEPPGARMRVGLTALTMAE 242

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 243 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERI--TST 300

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT+V +V V  D+  DP   +  + LD  +VL+RSLA +G YP VDPL S S +  
Sbjct: 301 KQGSITSVQAVYVPADDLTDPAPATTFAHLDSTVVLSRSLAAKGIYPAVDPLDSSSTILQ 360

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 ADIVGEEHYNTARAVKQTLQRYKELQDIIAILGLDELSEED-KLVVARARRIERFLSQP 418


>gi|23336546|ref|ZP_00121758.1| COG0056: F0F1-type ATP synthase, alpha subunit [Bifidobacterium
           longum DJO10A]
          Length = 545

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 93/421 (22%), Positives = 174/421 (41%), Gaps = 21/421 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + GY+++       VT L       + +  +      LG    ++   + +  +G    I
Sbjct: 33  EVGYVATAGDGIAHVTGL-PGCMANELLTFEDG---TLGLAFNLDAREIGVVILGDFAGI 88

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV++ LGKP+DG   +   +    + ++ P  M+R  
Sbjct: 89  EEGQEVRRTGEVLSVPVGDGYLGRVVDPLGKPLDGLGEIQGIEGRRILEAQAPDVMHRHP 148

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V++   TG++ ID  TP+  GQR  +      GK      T+++  A  +  D     + 
Sbjct: 149 VDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTIINQKANWESGDPKKQVRC 208

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +    +          + +V + + +S   + +AP T   I +++   G
Sbjct: 209 IYVAIGQKGSTIASVKQSLEDAGAMEYTTIVASPAADSAGFKYIAPYTGSAIGQHWMYNG 268

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    YP  VF    RLLER      +   G++
Sbjct: 269 KHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKVSDDLGGGSM 328

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  V    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A + 
Sbjct: 329 TGLPIVETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAQTK 388

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
             KK+  +L   + ++       +   +   +D      + +   + + LKQ      S 
Sbjct: 389 ALKKVSGTLKISLAQYRSLESFAM---FASDLDAASKAQLTRGAHLTELLKQPQFHPYSP 445

Query: 428 D 428
           +
Sbjct: 446 E 446


>gi|320455016|dbj|BAJ65655.1| ATP synthase beta subunit [Metzgeria nudifrons]
          Length = 492

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 186/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S ++    G I+ I      V     +   + + +V +G+NS   GQ I +  ++     
Sbjct: 11  SISVTTNVGNITQIIGPVLDVAFSPGKMPSIYNCLVVRGQNSA--GQEINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +     V   G    +       GR+ N LG+P+D    +  G  +
Sbjct: 69  NNKVRAVAMSATDGLMREMEVVDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVNAG-TT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|290490164|gb|ADD31489.1| ATP synthase CF1 beta subunit protein [Ximenia americana]
          Length = 498

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ+I +  ++        V    
Sbjct: 21  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQLINVTCEVQQLLGNSRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATYGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 ALIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYTEMKESGVINDQNIAESKVSLVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIIGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|155573941|dbj|BAF75536.1| ATP synthase beta subunit [Mallotus japonicus]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQEINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 71  MNATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRAIS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|148245074|ref|YP_001219768.1| F0F1 ATP synthase subunit beta [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166222425|sp|A5CVI6|ATPB_VESOH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146326901|dbj|BAF62044.1| F0F1-type ATP synthase beta subunit [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 459

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/404 (28%), Positives = 193/404 (47%), Gaps = 12/404 (2%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ I      V   +  +  + D +           Q  ++   IV    +G  E + 
Sbjct: 4   GKITQIIGAVIDVEFSADNMPKIYDALKVLETGLTLEVQ-QQLGDHIVRAIAMGGSEGLK 62

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G   ++       GR++N LG+PID    +G+ ++   I    P        
Sbjct: 63  RGLGVTNTGEPIKVPVGVKTLGRIMNVLGEPIDNAGEIGQ-EVDWTIHRSAPDYDELAPT 121

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+         + + VGER
Sbjct: 122 TELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIAHSGYSVFAGVGER 181

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  +G +VLL +D
Sbjct: 182 TREGNDFYHEMKESNVLNKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFID 241

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I R+  +  E++   G +P A GY  ++ SE+  L ERI  +  +KG+IT++ +V V  
Sbjct: 242 NIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYVPA 299

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSSL 376
           D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D     +E   +   +
Sbjct: 300 DDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGV 359

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++ R++E +DI  I G     +    ++V +   +  FL Q 
Sbjct: 360 QGVLQRYKELKDIIAILGMDELSEED-KRSVSRARKVQRFLSQP 402


>gi|30351863|emb|CAD48084.1| ATP synthase beta subunit [Oziroe biflora]
          Length = 495

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D + Q I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|75326812|sp|Q7H8M1|ATPB_IPOSE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633259|gb|AAM52104.1| ATP synthase beta subunit [Ipomoea setosa]
 gi|21633261|gb|AAM52105.1| ATP synthase beta subunit [Ipomoea arborescens]
          Length = 490

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+    ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRGNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|305671665|gb|ADM63142.1| ATP synthase beta subunit [Linnaea borealis]
          Length = 479

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708191|emb|CAB90036.1| ATP synthase beta subunit [Catalpa bignonioides]
          Length = 490

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIVQIIGPVXDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V + G    +       GR+ N LG+ +D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVINTGAPLSVPVGGATLGRIFNVLGEAVDNLGPVD-TRTTFPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|193211720|ref|YP_001997673.1| F0F1 ATP synthase subunit beta [Chlorobaculum parvum NCIB 8327]
 gi|1168573|sp|P42465|ATPB_CHLP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|560823|emb|CAA54200.1| ATPase beta-subunit [Prosthecochloris vibrioformis]
 gi|193085197|gb|ACF10473.1| ATP synthase F1, beta subunit [Chlorobaculum parvum NCIB 8327]
          Length = 462

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/428 (27%), Positives = 195/428 (45%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +    ++   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKL--VLETQQHLGEERVRTISM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + GR  +    A   GR++N +G+PIDG   +     S  I    P 
Sbjct: 59  EGTDGLVRGMSVANTGRPIQAPVGAEVLGRMLNVVGEPIDGKGPV-PSKKSYPIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVI 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +   +     +
Sbjct: 118 FDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGYSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   + +    + K+ +V    +E P  R    LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEG 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI     +KG++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGAEVSALLGRMPSAVGYQPTLGTEMGELQDRI--VSTKKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIIGND 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  ++ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYDTAQAVKQILQRYKDLQDIIAILGMDELSDED-KLVVARARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|262277907|ref|ZP_06055700.1| ATP synthase F1, beta subunit [alpha proteobacterium HIMB114]
 gi|262225010|gb|EEY75469.1| ATP synthase F1, beta subunit [alpha proteobacterium HIMB114]
          Length = 473

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 181/412 (43%), Gaps = 18/412 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I+ +      V        +   +      +  + +V   +    V    +   E +
Sbjct: 5   FGTITQVIGAVVDVKFDDHLPEINSALECDNNGNRLVLEVAQHLGEGTVRTISMDTTEGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V   G   R+       GR+IN +G+ ID    + K      I  + P  + +  
Sbjct: 65  KRGDKVTDTGDAIRVPVGPETLGRIINVIGEGIDQKGDV-KTKEQWPIHRQAPEFVEQST 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 ETEVLVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +   +        K+ +V    +E P  R    LT +T+AEYF  K  
Sbjct: 184 RTREGNDLYHEMIESGVIKTDGPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDKEG 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+
Sbjct: 244 QDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTTKGSITS 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V ++ V  D+  DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     D 
Sbjct: 302 VQAIYVPADDLTDPAPATSFSHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGDE 361

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 362 HYRVAREVQRILQTYKSLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 412


>gi|170178324|gb|ACB10581.1| ATP synthase beta subunit [Cornus walteri]
          Length = 450

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTPGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|221069420|ref|ZP_03545525.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1]
 gi|220714443|gb|EED69811.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1]
          Length = 469

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           VQG  +  I +V        Q   + D +  +G       Q  ++   +V    +G  + 
Sbjct: 4   VQGKIVQCIGAVVDVEFAHGQVPKVYDALKLEGTALTLEVQ-QQLGDGVVRTIALGSSDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG PID    + +  L+  I  K P      
Sbjct: 63  LKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGDVDQA-LTAPIHRKAPAYDELS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+VID+ +P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 122 PSQELLETGIKVIDLISPFAKGGKVGLFGGAGVGKTVNMMELINNIAKGHGGLSVFAGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +T+AE F  +
Sbjct: 182 ERTREGNDFYHEMSDAGVVNQANLNESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDE 241

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT
Sbjct: 242 GKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKVGSIT 299

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGE 359

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  K+   +   + R++E RDI  I G    +       V +   +  FL Q 
Sbjct: 360 EHYKVARQVQGTLQRYKELRDIIAILGMDE-LAPEDKLVVSRARKMQRFLSQP 411


>gi|24940192|emb|CAD43378.1| ATP synthase beta subunit [Lindelofia longiflora]
          Length = 489

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEIKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6689008|emb|CAB65351.1| ATP synthase beta subunit [Philadelphus lewisii]
          Length = 498

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|92116150|ref|YP_575879.1| F0F1 ATP synthase subunit beta [Nitrobacter hamburgensis X14]
 gi|118573706|sp|Q1QQS8|ATPB_NITHX RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91799044|gb|ABE61419.1| ATP synthase F1 subcomplex beta subunit [Nitrobacter hamburgensis
           X14]
          Length = 476

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +  ++  + +V   +    V    +   E 
Sbjct: 7   QTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    +   D+   I  + P   ++ 
Sbjct: 67  LVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRA-IHQEAPLYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    L+ +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ ++ V  D+  DP   +  + LD    LNR+++E+G YP VDPL S SR+        
Sbjct: 304 SIQAIYVPADDLTDPAPATSFAHLDATTTLNRAISEKGIYPAVDPLDSTSRMLSPLIVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +  ++ R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 364 EHYQTARMVQQVLQRYKSLQDIIAILGMDELSEED-KIAVARARKIERFLSQP 415


>gi|25808451|gb|AAN74352.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
 gi|25808473|gb|AAN74363.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +    V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEYSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|306485981|gb|ADM92639.1| ATP synthase CF1 beta subunit [Davidia involucrata]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|37720973|gb|AAN32489.1| ATP synthase beta subunit [Typha latifolia]
          Length = 484

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDAVFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|75330484|sp|Q8MBM4|ATPB_CALSE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633325|gb|AAM52137.1| ATP synthase beta subunit [Calystegia sepium]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V + G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  NGLMRGMEVINTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62085095|gb|AAX62954.1| ATP synthase beta subunit [Archytaea triflora]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIVGQEINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|74198645|dbj|BAE39797.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|31980648|ref|NP_058054.2| ATP synthase subunit beta, mitochondrial precursor [Mus musculus]
 gi|20455479|sp|P56480|ATPB_MOUSE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|12845667|dbj|BAB26846.1| unnamed protein product [Mus musculus]
 gi|26350917|dbj|BAC39095.1| unnamed protein product [Mus musculus]
 gi|28302366|gb|AAH46616.1| ATP synthase, H+ transporting mitochondrial F1 complex, beta
           subunit [Mus musculus]
 gi|74139742|dbj|BAE31720.1| unnamed protein product [Mus musculus]
 gi|74141200|dbj|BAE35911.1| unnamed protein product [Mus musculus]
 gi|74151428|dbj|BAE38829.1| unnamed protein product [Mus musculus]
 gi|74151806|dbj|BAE29691.1| unnamed protein product [Mus musculus]
 gi|74185118|dbj|BAE39161.1| unnamed protein product [Mus musculus]
 gi|74189002|dbj|BAE39267.1| unnamed protein product [Mus musculus]
 gi|74195964|dbj|BAE30540.1| unnamed protein product [Mus musculus]
 gi|74198581|dbj|BAE39769.1| unnamed protein product [Mus musculus]
 gi|74213430|dbj|BAE35529.1| unnamed protein product [Mus musculus]
 gi|74216691|dbj|BAE37764.1| unnamed protein product [Mus musculus]
 gi|74216945|dbj|BAE26587.1| unnamed protein product [Mus musculus]
 gi|74219911|dbj|BAE40537.1| unnamed protein product [Mus musculus]
 gi|74223230|dbj|BAE40749.1| unnamed protein product [Mus musculus]
 gi|74223633|dbj|BAE28692.1| unnamed protein product [Mus musculus]
 gi|74227679|dbj|BAE35689.1| unnamed protein product [Mus musculus]
 gi|148692595|gb|EDL24542.1| ATP synthase, H+ transporting mitochondrial F1 complex, beta
           subunit [Mus musculus]
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|331007714|ref|ZP_08330844.1| ATP synthase beta chain [gamma proteobacterium IMCC1989]
 gi|330418473|gb|EGG93009.1| ATP synthase beta chain [gamma proteobacterium IMCC1989]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 183/413 (44%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +   +    L    ++   +V    +G  E 
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPKVYDALTVSEKGLTLEVQQQLGDGVVRAIAMGSSEG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           IS G  V +      +       GR+++ LG PID    +G+ +  M I  K P      
Sbjct: 61  ISRGLEVANSEAPISVPVGTETLGRIMDVLGSPIDECGPIGEQE-RMPIHRKAPAYDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             E+  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 ASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +T+AE F  +
Sbjct: 180 ERTREGNDFYHEMQEAGVVDVETFSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDE 239

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL +D+I R+  +  E++   G +P A GY  ++  E+    ERI  +  + G+IT
Sbjct: 240 GKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVFQERI--TSTKTGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D      
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASKGIYPAVDPLGSTSRQLDPLIIGN 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +  ++ R++E +DI  I G     +    ++V +   I  FL Q 
Sbjct: 358 EHYDIARGVQTVLQRYKELKDIIAILGMDELSEED-KQSVTRARKIERFLSQP 409


>gi|317486591|ref|ZP_07945412.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
 gi|316922191|gb|EFV43456.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6]
          Length = 470

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 195/410 (47%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS----DNLGQV-IRINLDIVYICPVGI 77
           G I  +      V     ++  +   +  +  N+    D + +V   +  D+V    +  
Sbjct: 6   GKIVQVIGAVVDVAFPDGHLPNILTALEIKNPNNSDAPDLICEVAQHLGDDVVRTIAMDA 65

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G+       +   GR++N +G+P+D    + K +  + I  + P  +
Sbjct: 66  TEGLVRGMDVVDTGKPIMAPVGSASLGRIMNVVGRPVDEMGPI-KAEKYLPIHREAPSFV 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         + +
Sbjct: 125 EQNTSVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFA 184

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +     + +K+ +V    +E P  R    LTA+T AEYF  +   +
Sbjct: 185 GVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALTCAEYFRDEENQD 244

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V 
Sbjct: 245 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGSLQERI--TSTNKGSITSVQ 302

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D     +E  
Sbjct: 303 AVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHY 362

Query: 372 -LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 363 GVARGVQQVLQKYKELQDIIAILGMDELSDDD-KLVVARARRIQRFLSQP 411


>gi|194267350|gb|ACF35661.1| ATP synthase beta subunit [Turrillia lutea]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|195468861|dbj|BAG66953.1| ATP synthase beta subunit [Anchietea parvifolia]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVGERGREV---REFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G       +   +               K  +V    +E P+ R    LTA+T+A
Sbjct: 190 VFGGGGERPREGNDLYTEMKESGVLNEANFAESKVALVYGQMNEPPVARMKVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|155029343|dbj|BAF75555.1| ATP synthase beta subunit [Glycydendron amazonicum]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917418|dbj|BAF40524.1| ATP synthase beta subunit [Homalium foetidum]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHKSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917402|dbj|BAF40509.1| ATP synthase beta subunit [Flueggea virosa]
          Length = 481

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 34  KGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 93

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 94  IFNVLGEPVDELGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 152

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 153 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 212

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 213 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 272

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 273 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 330

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 331 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 390

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 391 ILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|33327753|gb|AAQ09240.1| ATP synthase beta subunit [Hydrangea macrophylla]
          Length = 495

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V  G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVXDVAFPPGKMPNIYNALVVXG--RDTVGQPINVXCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLPVARARKIERFLSQP 432


>gi|7708570|emb|CAB89977.1| ATP synthase beta subunit [Reinwardtia indica]
          Length = 491

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     + + + + ++  G+  D  GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMLNIYNALLVXGQ--DPAGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|32815637|gb|AAP88215.1| ATP synthase beta subunit [Ostryopsis davidiana]
          Length = 457

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVN-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|241765094|ref|ZP_04763085.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN]
 gi|241365286|gb|EER60114.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN]
          Length = 468

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/413 (28%), Positives = 188/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           VQG  +  I +V        Q   + D +  +G +     Q  ++   +V    +G  + 
Sbjct: 4   VQGKIVQCIGAVVDVEFPRDQMPKIYDALKLEGSSLTLEVQ-QQLGDGVVRTIALGSSDG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG PID    + + DL+  I  K P      
Sbjct: 63  LRRGIMVTNTGSAITVPVGKATLGRIMDVLGAPIDERGPVSQ-DLTASIHRKAPAYDELS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +TIAE F  +
Sbjct: 182 ERTREGNDFYHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDE 241

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 242 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSIT 299

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 359

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      ++   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 360 DHYATARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 411


>gi|254361677|ref|ZP_04977814.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153093199|gb|EDN74210.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 457

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 188/407 (46%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGSSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 ANSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KRLVARARKIERFLSQP 401


>gi|138752431|emb|CAM09324.1| ATP synthetase beta subunit [Metteniusa tessmanniana]
          Length = 482

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D +GQ+I +  ++        V    
Sbjct: 13  GRIDQIIGPVLDVAFPRGKMPNIYNALLVKG--RDTVGQLINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718042|gb|AAK72762.1| ATP synthase beta subunit [Chamerion angustifolium]
          Length = 475

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGGPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGDDHYETAQRVKETLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|7708159|emb|CAB90027.1| ATP synthase beta subunit [Balanites maughamii]
          Length = 487

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  + +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 47  KARNTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 107 IFNVLGEPVDNLGPVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 165

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 166 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKKLA 225

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 226 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 286 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPAPATTFAHL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 344 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 403

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 404 ILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|83859268|ref|ZP_00952789.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633]
 gi|83852715|gb|EAP90568.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633]
          Length = 436

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 164/429 (38%), Positives = 242/429 (56%), Gaps = 6/429 (1%)

Query: 14  DYSKNLVVQG--GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           D   NL  +   G +S++  +       +  + LG      G    +  +V+    +   
Sbjct: 6   DRISNLETRTFKGRVSAVNGLLVEAEGPAMALTLGARAHLDGPVKASF-EVVGFRGETAL 64

Query: 72  ICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           +        +  G +     R   I P   W GRV+++  +P D    L +GD+   +  
Sbjct: 65  MMAYDDLTGVRPGAIATLDPRGDAIRPHKAWLGRVMDSFCRPQDSLGFLPEGDVEYALKG 124

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P A +RQR+ +    G+R +++FTP+  GQR+GVFAGSG+GKS LLSM AR    D +
Sbjct: 125 RPPGAHSRQRLGERLDLGVRAMNVFTPMRLGQRLGVFAGSGVGKSVLLSMLARGSEADVI 184

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I L+GERGRE REF+ED LG +   +SVV+  TSD   + R+ A  T +  AEYF  +G
Sbjct: 185 VIGLIGERGREAREFVEDVLGPEGRARSVVITETSDAPALARRRACYTTMATAEYFRDQG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            NVL ++DSITRFA + REI   +GE P  RGY  SVF+ELP LLER GP  +  G IT 
Sbjct: 245 LNVLCLMDSITRFALAQREIGLAAGEPPTTRGYTPSVFAELPGLLERAGPGPQGTGTITG 304

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + +VLVDGD+HN+PIAD+VR ILDGHIV++RS+AE GR+P +D L S+SR A + ++ +E
Sbjct: 305 LFTVLVDGDDHNEPIADAVRGILDGHIVMSRSIAERGRFPAIDVLKSISRSAPEVYAPEE 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-D 428
             L      L+  + +  ++  +G Y  G +  +D+A+     +  FL Q   + SS  +
Sbjct: 365 APLAREARKLLAAYADMEELIRLGAYSSGSNPEVDRAIAVNEPLEAFLGQGKDETSSIGE 424

Query: 429 VFQEITKKL 437
            F  +   L
Sbjct: 425 SFAHLAGIL 433


>gi|299065197|emb|CBJ36363.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           CMR15]
          Length = 467

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+PID    +   D
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMPVSNTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-AAD 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 EKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           +V +   I  FL 
Sbjct: 350 QLDPQVVGTEHYEVADRVKKTLQRYKELRDIIAILGMDELS-PEDKLSVGRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|183206608|gb|ACC54502.1| ATP synthase beta subunit [Wahlenbergia gloriosa]
          Length = 488

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 11  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATEGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVGERGREV---REFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G       +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTPEGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|156530095|gb|ABU75144.1| AtpB [Ailanthus altissima]
          Length = 464

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 26  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGEPVDNLGPVD-TRATSPIHKPAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLTVARARKIERFLSQP 410


>gi|155029309|dbj|BAF75537.1| ATP synthase beta subunit [Mareya micrantha]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917338|dbj|BAF40454.1| ATP synthase beta subunit [Dicoelia beccariana]
          Length = 485

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|319404806|emb|CBI78407.1| ATP synthase beta chain [Bartonella rochalimae ATCC BAA-1498]
          Length = 530

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/432 (25%), Positives = 190/432 (43%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I  +      V    +   + + +  +   +  + +V   +  + V    +   E + 
Sbjct: 58  GEIRQVIGAVVDVHFEGELPHILNALETENLGNKLVLEVAQHLGENTVRTIAMDTTEGLV 117

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V+  G +  +       GR++N +G+P+D    L        I  + P  + +   
Sbjct: 118 RGQKVYDTGAQICVPVGEATLGRIMNVIGEPVDDAG-LIMATKKRSIHQEAPQYVEQSTE 176

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 177 SEILVTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 236

Query: 199 GREVREFIEDYLGDNL------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            RE  +   + +   +             K  +V    +E P  R    L+ +TIAE F 
Sbjct: 237 TREGNDLYYEMIESRVNVDPRENGSTVGSKCALVYGQMNEPPGARARVALSGLTIAENFR 296

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+
Sbjct: 297 DEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGS 354

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D    
Sbjct: 355 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIV 414

Query: 367 ADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
            +E   +   +  ++ R++  +DI  I G     +      V +   I  FL Q      
Sbjct: 415 GEEHYTVACQVQTILQRYKSLQDIIAILGMDELSEED-KLLVARARKIERFLSQP---FH 470

Query: 426 SEDVFQEITKKL 437
             + F     KL
Sbjct: 471 VAEAFTGAPGKL 482


>gi|300689832|ref|YP_003750827.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           PSI07]
 gi|299076892|emb|CBJ49505.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           PSI07]
          Length = 467

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    +   D
Sbjct: 53  LGDGVVRTIALGSSDGLRRGMAVKGTGAAISVPVGHGTLGRIMDVLGRPIDEAGPI-ACD 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 EKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 232 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 349

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           +V +   I  FL 
Sbjct: 350 QLDPQVVGTEHYEVADRVKKTLQRYKELRDIIAILGMDELS-PEDKLSVGRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|284032932|ref|YP_003382863.1| ATP synthase F1 subunit alpha [Kribbella flavida DSM 17836]
 gi|283812225|gb|ADB34064.1| ATP synthase F1, alpha subunit [Kribbella flavida DSM 17836]
          Length = 545

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/447 (21%), Positives = 177/447 (39%), Gaps = 24/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L +    Y      +   G +         V  L       + +V +       G  +
Sbjct: 13  DALDRFVSSYEPETATREEVGTVVDAGDGIAHVEGL-PSAMTNELLVFEDG---TQGIAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G+   +     + GRV++ +GKPIDG   +   
Sbjct: 69  NLDVRDIGVVVLGEFSGIEEGQQVRRTGQVLSVPVGEGYLGRVVDPMGKPIDGLGEITNL 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           + +  +  +    M+RQ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 129 EGTRALELQAAGVMDRQEVREPLQTGIKAIDGMIPIGRGQRQLIIGDRKTGKTAIAVDTI 188

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +               + +V + + +    +
Sbjct: 189 INQKANWESGDPQKQVRCIYVAIGQKGSTIASVRGALEEAGAMEYTTIVASPASDPAGFK 248

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +T+ A + R ++      P    YP  VF    
Sbjct: 249 YVAPYTGSAIGQHWMYQGKHVLIVFDDLTKQAEAYRSMSLLLRRPPGREAYPGDVFYLHS 308

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L      P
Sbjct: 309 RLLERCAKLSAELGGGSMTGLPMIETKANDVSAFIPTNVISITDGQIFLQSDLFNANIRP 368

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     KK+  SL   + +F   R +     +   +D    + + +
Sbjct: 369 AIDVGISVSRVGGAAQVKAMKKVSGSLKLDLAQF---RAMEAFAMFASDLDATSRRQLDR 425

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + L+Q   S    E+    I  
Sbjct: 426 GQRLVELLRQPQYSPYPVEEQVVSIWA 452


>gi|183206486|gb|ACC54441.1| ATP synthase beta subunit [Michauxia tchihatchewii]
          Length = 482

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 8   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|118917400|dbj|BAF40506.1| ATP synthase beta subunit [Astrocasia tremula]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708325|emb|CAB89907.1| ATP synthase beta subunit [Hedera helix]
          Length = 481

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|15425568|emb|CAC60247.1| ATP synthase beta subunit [Cyphia rogersii]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 13  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGKPINMTCEVQKLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +   +   GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGSATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|1890178|emb|CAA69911.1| F0/F1-ATPase [Helicobacter pylori]
          Length = 434

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 159/423 (37%), Positives = 231/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   S+ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID    L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFEQSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|156618839|ref|YP_001430121.1| ATP synthase CF1 beta subunit [Cuscuta reflexa]
 gi|231596|sp|P30399|ATPB_CUSRE RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|58333|emb|CAA43866.1| H(+)-transporting ATP synthase [Cuscuta reflexa]
 gi|156556024|emb|CAM98407.1| ATP synthase CF1 beta chain [Cuscuta reflexa]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/439 (25%), Positives = 191/439 (43%), Gaps = 26/439 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL 59
           M+ N  T         K      G+I  I      V     +   + + ++ +G++++ +
Sbjct: 1   MRINPPTYGSEISSIEKK---NRGHIVQIIGPVLDVAFPPGKMPNIYNALIVKGRDTEQM 57

Query: 60  ---GQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
               +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 58  NVTCEVQQLLGNNRVRAVAMNDTDGLMRGMEVIDTGTPITVPVGGSTLGRIFNVLGEPVD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   + +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 118 NLGPVD-TNTTFTIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 176

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 177 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQ 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 237 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 297 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 354

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 355 AAKGIYPAVDPLDSTSMMLQPRLVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEE 414

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 415 D-RLTVARARKIERFLSQP 432


>gi|238922550|ref|YP_002936063.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
 gi|238874222|gb|ACR73929.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
 gi|291526387|emb|CBK91974.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale DSM
           17629]
 gi|291526832|emb|CBK92418.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale
           M104/1]
          Length = 463

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/409 (28%), Positives = 187/409 (45%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I  + S    +         + D V    KN   L  V+     +  D V    +G  
Sbjct: 7   GKIIQVISAVLDIKFSEGNLPEINDAVEVPLKNGGKL--VVEVAQHLGDDTVRCIAMGPT 64

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N LG+PID  +   + +    I    P    
Sbjct: 65  DGLVRGMDAIATGAPISVPVGENTLGRMFNVLGEPIDEVEP-PQTEEKWAIHRPAPSFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +   ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        S+   
Sbjct: 124 QATSQEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATQHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    L  +T+AEYF  +G  +V
Sbjct: 184 VGERTREGNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALAGLTMAEYFRDRGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371
           V V  D+  DP   +  + LD   VL RS+AE G YP VDPLAS SR+ D      E  +
Sbjct: 302 VYVPADDLTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLASTSRILDPRIVGQEHFE 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++  ++ +++E +DI  I G     +      V +   +  FL Q 
Sbjct: 362 VAHAVQEILQKYKELQDIIAILGMDELSEED-KLVVSRARKVQRFLSQP 409


>gi|194267371|gb|ACF35671.1| ATP synthase beta subunit [Lasjia whelanii]
          Length = 475

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|119367986|dbj|BAF40475.1| ATP synthase beta subunit [Excoecaria cochinchinensis]
          Length = 486

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|63091855|emb|CAH58778.1| ATP synthase alpha chain [Enterococcus moraviensis]
 gi|63091883|emb|CAH58793.1| ATP synthase alpha chain [Enterococcus haemoperoxidus]
          Length = 367

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 155/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLETNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + K D +  + +  P  M R+ V++  +TG++ ID
Sbjct: 57  EVPVGEAMIGRVVNPLGQPIDGLGEI-KTDKTRPVEAAAPGVMQRKSVDQPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDVICIYVAIGQKESTVRNQVETLRA 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 +++V A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGALDYTIIVNAGASQPAPLLYIAPYAGAAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|30351937|emb|CAD48416.1| ATP synthase beta subunit [Scilla scilloides]
          Length = 495

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I         +  + V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVICEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|12004113|gb|AAG43896.1|AF213765_1 ATP synthase beta subunit [Grammadenia sp. Stahl 1579]
          Length = 477

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633401|gb|AAM52175.1| ATP synthase beta subunit [Calycobolus glaber]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   +D   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPKIYNALVVQGRDKEQTDVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLKRGMQVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTXXIHISAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P  HG +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRHGGKIGLFGGAGLGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|255692512|ref|ZP_05416187.1| ATP synthase F1, alpha subunit [Bacteroides finegoldii DSM 17565]
 gi|260621787|gb|EEX44658.1| ATP synthase F1, alpha subunit [Bacteroides finegoldii DSM 17565]
          Length = 527

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 170/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINANVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  + I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDRIKEGFIVKRTKRIASIRVGEGMLGRVIDPLGEPLDGKGLVGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 128 YDMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAIDAII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +     +     ++VV AT+ +   L+  AP
Sbjct: 188 NQRSNFLAGDPVYCIYVAIGQKGSTVASIVNTLRENGALDYTIVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIISQEEVAREMNDLPDSLKDIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGVRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITALTIDKGRKNAQLLIQPQ 450


>gi|225024609|ref|ZP_03713801.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC
           23834]
 gi|224942623|gb|EEG23832.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC
           23834]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/411 (26%), Positives = 182/411 (44%), Gaps = 20/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G I  I      V      +  + D +  +  ++D   +V + +   +V    +G  + +
Sbjct: 4   GKIVQIIGAVVDVEFPRTAIPRVYDAL--KLVDTDLTLEVQQQLGDGVVRTIAMGSTDGL 61

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V + G    +       GR+++ LG P+D    +G  D +  I    P       
Sbjct: 62  KRGLAVQNTGAPITVPVGKATLGRIMDVLGNPVDEQGPIG-SDQTRAIHQFAPKFDELSS 120

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VGE
Sbjct: 121 TTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE 180

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL--- 253
           R RE  +F  +    N+  K  +V    +E P  R    LT +++AEYF  + D      
Sbjct: 181 RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLSMAEYFRDEKDENGKGR 240

Query: 254 ---LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
                +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT++
Sbjct: 241 DVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 299 QAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + +++E RDI  I G     D      V +   I  FL Q 
Sbjct: 359 YDVARGVQSTLQKYKELRDIIAILGMDELSDED-KMTVMRARKIQRFLSQP 408


>gi|6687485|emb|CAB64957.1| ATP synthase beta subunit [Eucnide bartonioides]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQPINVTCEVHQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D    L+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTGLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758899|gb|AAD50873.1| ATP synthase beta subunit [Musa acuminata]
          Length = 496

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62902821|gb|AAY19325.1| ATP synthase beta subunit [Parnassia glauca]
          Length = 488

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLTRGMEVIDTGVPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|62085194|gb|AAX63001.1| ATP synthase beta subunit [Scyphostegia borneensis]
          Length = 483

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|74204509|dbj|BAE35331.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|74197074|dbj|BAE35088.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|330812735|ref|YP_004357197.1| ATP synthase subunit beta [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380843|gb|AEA72193.1| putative ATP synthase, beta chain [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 458

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 186/407 (45%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  QG  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALKVQGAETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +   +    I    P    +
Sbjct: 60  GLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEE-RWGIHRPAPSFAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSEAD-KQLVSRARKIQRFLSQP 402


>gi|183206662|gb|ACC54529.1| ATP synthase beta subunit [Campanula aizoides]
          Length = 495

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 47  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGRATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 107 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 165

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 166 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 225

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 226 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 286 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 344 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 403

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 404 ILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|110915598|gb|ABH02587.1| ATP synthase beta subunit [Briza minor]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q K++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSKDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910766|gb|ABI48115.1| ATPase beta subunit [Ricciocarpos natans]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 31  GQEINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGAPLSVPVGEATLGRIFNVLG 90

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 91  EPVDNLGPV-EATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 149

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 150 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 210 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 270 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 328 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 387

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 388 LSEED-RLTVARARKIERFLSQP 409


>gi|56236578|gb|AAV84656.1| ATP synthase beta subunit [Saxegothaea conspicua]
          Length = 424

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 162/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVNAS-TRS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + S VGER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFSGVGERTREGNDLYMEMKESGVIKEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGCLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|296802108|gb|ADH51552.1| mitochondrial H+-transporting ATP synthase F1 complex beta
           polypeptide [Miniopterus fuliginosus]
          Length = 486

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 32  VATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 91

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 92  GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 150

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 151 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 210

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 211 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 270

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 271 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 328

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 329 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 388

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 389 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 441


>gi|183206610|gb|ACC54503.1| ATP synthase beta subunit [Craterocapsa tarsodes]
          Length = 476

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LG+ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGEPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSNEHYETAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   +  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKMERFLSQP 413


>gi|183206554|gb|ACC54475.1| ATP synthase beta subunit [Edraianthus graminifolius]
          Length = 473

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 144 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|170178344|gb|ACB10591.1| ATP synthase beta subunit [Cornus disciflora]
          Length = 455

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMKLINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|119367980|dbj|BAF40470.1| ATP synthase beta subunit [Manihot esculenta]
          Length = 486

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|112791338|gb|ABI21939.1| ATP synthase beta subunit [Enterobacter cloacae subsp. dissolvens]
          Length = 421

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  L+ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|63091799|emb|CAH58750.1| ATP synthase alpha chain [Enterococcus pseudoavium]
 gi|63091829|emb|CAH58765.1| ATP synthase alpha chain [Enterococcus pseudoavium]
 gi|63091965|emb|CAH58840.1| ATP synthase alpha chain [Enterococcus pseudoavium]
          Length = 367

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIVLGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   + +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGENMIGRVVNPLGQPIDGMGPIETTN-TRPVEAMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKESTVRSQVETLRK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 +++V A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIIVTAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLVIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|81846246|sp|Q8EWY8|ATPB_MYCPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|26453520|dbj|BAC43852.1| ATP synthase subunit beta [Mycoplasma penetrans HF-2]
          Length = 778

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 120/412 (29%), Positives = 195/412 (47%), Gaps = 14/412 (3%)

Query: 19  LVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIV-YICPV 75
           L    G I  I      V    +Q   + D +  +  N+  L  +V  +  D V     +
Sbjct: 295 LKSDKGIIYQIFGPVVDVKFARNQMPNINDCLEVKLPNNKKLVLEVALLEGDDVARCISM 354

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  E +  G  V +          +   GR+ N +G+PID      K + S  I  K P 
Sbjct: 355 GSTEGLYRGLEVINTKNPIMAPVGSAVLGRMFNVVGEPIDNKPMPEKVEYS-PIHKKPPS 413

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         I
Sbjct: 414 FDEQSTKTEIFETGIKVIDLLVPYVKGGKIGLFGGAGVGKTVLVQELIHNIATGHGGLSI 473

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKG 249
            + VGER RE  +   +   G  + ++ +V    +E P  R    LTA+T+AE+F  +  
Sbjct: 474 FAGVGERTREGNDLYHEMIDGGVINQTALVFGQMNEPPGARMRVALTALTMAEHFRENNK 533

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF+ +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+
Sbjct: 534 QDVLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLAFEMGQLQERI--TSTKSGSITS 591

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R +A  G YP ++PL S SR+ D +    +
Sbjct: 592 VQAVYVPADDLTDPAPSTTFAHLDAKTVLDRKIASLGIYPAINPLESSSRMLDPSIVGIE 651

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             K+  S+  ++ +FEE +DI  I G     +      V +   I +FL Q 
Sbjct: 652 HYKVARSVQTILQKFEELQDIIAILGIDELSEED-KLTVSRARKIRNFLSQP 702


>gi|87121037|ref|ZP_01076928.1| ATP synthase subunit B [Marinomonas sp. MED121]
 gi|86163529|gb|EAQ64803.1| ATP synthase subunit B [Marinomonas sp. MED121]
          Length = 458

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +  +GK  + + +V + +   IV    +G  
Sbjct: 1   MSSGQIVQIIGAVIDVEFPRDSVPKVYDALTIEGK--ELVLEVQQQLGDGIVRAIAMGST 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G +V +      +       GR+++ LG PID    +G+ +    I  + P    
Sbjct: 59  EGMKRGLVVDNTNNPVSVPVGTKTLGRIMDVLGNPIDEKGPIGEEE-RWAIHREAPSYAE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 118 QSSDNALLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 177

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 178 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 237

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 238 FFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAV 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  S LD  +VL+R +A  G YP +DPL S SR  D      +   +
Sbjct: 296 YVPADDLTDPSPATTFSHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +     +V++   I  F+ Q 
Sbjct: 356 ARGVQTVLQRYKELKDIIAILGMDELSEED-KLSVNRSRKIQRFMSQP 402


>gi|323715434|gb|ADY04785.1| ATP synthase beta subunit [Mastixia caudatilimba]
          Length = 481

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 5   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 418


>gi|290490154|gb|ADD31484.1| ATP synthase CF1 beta subunit protein [Meliosma aff. cuneifolia
           Moore 333]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|213406065|ref|XP_002173804.1| ATP synthase subunit beta [Schizosaccharomyces japonicus yFS275]
 gi|212001851|gb|EEB07511.1| ATP synthase subunit beta [Schizosaccharomyces japonicus yFS275]
          Length = 518

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/444 (25%), Positives = 192/444 (43%), Gaps = 23/444 (5%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           QLA   S   + + G I  +             +    L             + +V +  
Sbjct: 34  QLARFASTESLKKAGTIKQVIGAVVDCQFDDAQALPTILNALETKLPDGRRLVLEVAQHM 93

Query: 67  LDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
            +  V    +   E +  G  V   G    +       GR++N +G+PID    +     
Sbjct: 94  GENTVRTIAMDGTEGLVRGSKVIDTGAPIAVPVGPGTLGRIMNVIGEPIDERGPIKAAKY 153

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           S  I ++ P    +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +
Sbjct: 154 S-PIHAEAPSFEEQSTSPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINN 212

Query: 185 DCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAP 235
                   S+   VGER RE  +   +         D   K+ +V    +E P  R    
Sbjct: 213 IAKAHGGYSVFTGVGERTREGNDLYREMQETGVIKLDGESKAALVFGQMNEPPGARARVA 272

Query: 236 LTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + 
Sbjct: 273 LTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQ 332

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+RS++E G YP VDPL
Sbjct: 333 ERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISEMGIYPAVDPL 390

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D      +   L SS+  ++  ++  +DI  I G     +      V +   +
Sbjct: 391 DSKSRMMDPRIVGEEHYNLASSVQRMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKV 449

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q     +  +VF  +  + 
Sbjct: 450 QRFLSQP---FAVAEVFTGLEGRF 470


>gi|195402199|ref|XP_002059694.1| ATPsyn-beta [Drosophila virilis]
 gi|194155908|gb|EDW71092.1| ATPsyn-beta [Drosophila virilis]
          Length = 506

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 194/429 (45%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +    ++   + +V   +  + V    +   E +
Sbjct: 38  NGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 97

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI   A   GR++N +G+PID    +     S  I ++ P  ++   
Sbjct: 98  VRGQKVLDTGSPIRIPVGAETLGRIMNVIGEPIDERGPIPSAKTS-PIHAEAPEFVDMSV 156

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P C G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 157 EQEILVTGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 216

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 217 RTREGNDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEG 276

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 277 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITS 334

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 335 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQE 394

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 395 HYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 450

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 451 VFTGHAGKL 459


>gi|61968213|gb|AAX57033.1| ATP synthase beta subunit [Astrocasia neurocarpa]
 gi|61968283|gb|AAX57068.1| ATP synthase beta subunit [Petalodiscus platyrachis]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|15425576|emb|CAC60327.1| ATP synthase beta subunit [Escallonia rubra]
          Length = 462

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 15  KGRDTGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 74

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 75  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 133

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 134 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIG 193

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 194 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 253

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 254 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 311

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 312 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 371

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 372 ILGLDELSEED-RLTVARARKIERFLSQP 399


>gi|74220566|dbj|BAE31497.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   ++       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKVPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT + +AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLAVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|54301816|ref|YP_131809.1| F0F1 ATP synthase subunit beta [Photobacterium profundum SS9]
 gi|81828635|sp|Q6LKZ6|ATPB2_PHOPR RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|46915236|emb|CAG22009.1| putative ATP synthase F1, beta subunit [Photobacterium profundum
           SS9]
          Length = 461

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 188/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  +      V      V        +  G NS  + +V + I   IV    +G 
Sbjct: 1   MSTGKIVKVIGAVVDVEFDQDSVPRVYDALNIIDGNNSSLVLEVQQQIGSGIVRCIAMGS 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G +  + G    +       GR++N LG+PID    +G+   S  I  + P   
Sbjct: 61  SDGMRRGLVAVNTGEPITVPVGEETLGRIMNVLGQPIDECGEIGQ-KTSYPIHREPPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 DQANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFT 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +     +  K  +V    +E P  R    LT +TIAE F  +G +V
Sbjct: 180 GVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +   KG+IT++ +
Sbjct: 240 LLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTHKGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGVEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 358 VARGVQTVLQRYKELKDIIAILGMDELSEDD-KLTVARARKVERFLTQP 405


>gi|47575824|ref|NP_001001256.1| mitochondrial ATP synthase beta subunit [Xenopus (Silurana)
           tropicalis]
 gi|45767611|gb|AAH67388.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Xenopus (Silurana) tropicalis]
 gi|89269884|emb|CAJ83426.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Xenopus (Silurana) tropicalis]
          Length = 525

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/431 (25%), Positives = 195/431 (45%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+++  + +V   +  + V    +   E
Sbjct: 55  TAVGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDTRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    +     +  I ++ P  +  
Sbjct: 115 GLVRGQKVLDAGTPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +  ++   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 412 LEHYEVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQV 467

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 468 AEVFTGHLGKL 478


>gi|239928883|ref|ZP_04685836.1| F0F1 ATP synthase subunit alpha [Streptomyces ghanaensis ATCC
           14672]
 gi|291437210|ref|ZP_06576600.1| F0F1 ATP synthase subunit alpha [Streptomyces ghanaensis ATCC
           14672]
 gi|291340105|gb|EFE67061.1| F0F1 ATP synthase subunit alpha [Streptomyces ghanaensis ATCC
           14672]
          Length = 530

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 91/447 (20%), Positives = 174/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVTRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + I   +G++G  +         +   + + +V A + +    +
Sbjct: 188 INQRDNWRTGDPKKQVRCIYVAIGQKGSTIASVRRALEENGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKAQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ+  + +++ED    I  
Sbjct: 425 GQRMVELLKQNQYEPMATEDQVVSIWA 451


>gi|227113923|ref|ZP_03827579.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 460

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   IV    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLNVNNLDHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEE-RWAIHRSAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|183206556|gb|ACC54476.1| ATP synthase beta subunit [Campanula bononiensis]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  DNLGQ I +  ++        V   
Sbjct: 2   GRIGQIIGPVLDVAFPPGKMPYIYNALVV---KGRDNLGQPINVTCEVQQLLGNNRVRAV 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 59  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 118 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 177

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 178 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 237

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 238 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 295

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 296 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 355

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 356 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 414

Query: 420 S 420
            
Sbjct: 415 P 415


>gi|222109523|ref|YP_002551787.1| f0f1 ATP synthase subunit beta [Acidovorax ebreus TPSY]
 gi|254808148|sp|B9MBA3|ATPB_ACIET RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|221728967|gb|ACM31787.1| ATP synthase F1, beta subunit [Acidovorax ebreus TPSY]
          Length = 468

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/414 (27%), Positives = 188/414 (45%), Gaps = 20/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGE 79
           VQG  +  I +V        Q   + D +  +G  S    +V + +   +V    +G  +
Sbjct: 4   VQGKIVQCIGAVVDVEFPRDQMPKVYDALKLEG--SPLTLEVQQQLGDGVVRTIALGSSD 61

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G +V + G    +       GR+++ LG PID    + +  L+  I  K P     
Sbjct: 62  GLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQS-LTASIHRKAPAYDEL 120

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 121 SPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 180

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +TIAE F  
Sbjct: 181 GERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRD 240

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+I
Sbjct: 241 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSI 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 299 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVG 358

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +   + R++E RDI  I G    +       V +   I  FL Q 
Sbjct: 359 EEHYQVARQVQGTLQRYKELRDIIAILGMDE-LAPEDKLVVARARKIQRFLSQP 411


>gi|155029325|dbj|BAF75546.1| ATP synthase beta subunit [Tragiella anomala]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-IRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910870|gb|ABI48167.1| ATPase beta subunit [Bryum argenteum]
          Length = 449

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 12  KGQNTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVVDTGAPLSVPVGEATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|15425580|emb|CAC60328.1| ATP synthase beta subunit [Forstera bellidifolia]
          Length = 495

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  G+ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGEPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|6687629|emb|CAB65019.1| ATP synthase beta subunit [Fendlera rupicola]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|228988529|ref|ZP_04148616.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158866|ref|ZP_04286923.1| ATP synthase subunit beta [Bacillus cereus ATCC 4342]
 gi|228624477|gb|EEK81247.1| ATP synthase subunit beta [Bacillus cereus ATCC 4342]
 gi|228771146|gb|EEM19625.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|183206560|gb|ACC54478.1| ATP synthase beta subunit [Symphyandra armena]
          Length = 471

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELMNNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEKKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|183206558|gb|ACC54477.1| ATP synthase beta subunit [Campanula lanata]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  DNLGQ I +  ++        V   
Sbjct: 6   GRIGQIIGPVLDVAFPPGKMPYIYNALVV---KGRDNLGQPINVTCEVQQLLGNNRVRAV 62

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 63  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 121

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 122 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 181

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 182 SVFGGVXERTREXNDLYXEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 241

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 242 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 300 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 360 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 418

Query: 420 S 420
            
Sbjct: 419 P 419


>gi|156530115|gb|ABU75154.1| AtpB [Castela coccinea]
          Length = 485

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I  + 
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKRA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|155029349|dbj|BAF75558.1| ATP synthase beta subunit [Micrandra spruceana]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDDLGPVD-TRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917428|dbj|BAF40530.1| ATP synthase beta subunit [Ionidium commune]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G+  D LGQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTLGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYIEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGDEHYETAQRVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|115564937|emb|CAJ70621.1| ATP synthase beta subunit [Matudaea trinervia]
          Length = 470

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|4995181|emb|CAB44038.1| H(+)-transporting ATP synthase [Helicteres baruensis]
          Length = 472

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K    +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGRXTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|21633309|gb|AAM52129.1| ATP synthase beta subunit [Xenostegia tridentata]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNLVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLKRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|14718126|gb|AAK72802.1| ATP synthase beta subunit [Meliosma veitchiorum]
          Length = 474

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|42784475|ref|NP_981722.1| F0F1 ATP synthase subunit beta [Bacillus cereus ATCC 10987]
 gi|206976897|ref|ZP_03237799.1| ATP synthase F1, beta subunit [Bacillus cereus H3081.97]
 gi|217962793|ref|YP_002341371.1| F0F1 ATP synthase subunit beta [Bacillus cereus AH187]
 gi|222098776|ref|YP_002532834.1| f0f1 ATP synthase subunit beta [Bacillus cereus Q1]
 gi|229142046|ref|ZP_04270571.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST26]
 gi|81830903|sp|Q72XE8|ATPB_BACC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739979|sp|B7HY64|ATPB_BACC7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808131|sp|B9IRT7|ATPB_BACCQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|42740407|gb|AAS44330.1| ATP synthase F1, beta subunit [Bacillus cereus ATCC 10987]
 gi|206744863|gb|EDZ56268.1| ATP synthase F1, beta subunit [Bacillus cereus H3081.97]
 gi|217063479|gb|ACJ77729.1| ATP synthase F1, beta subunit [Bacillus cereus AH187]
 gi|221242835|gb|ACM15545.1| ATP synthase F1, beta subunit [Bacillus cereus Q1]
 gi|228641335|gb|EEK97641.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST26]
          Length = 468

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 48  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVP 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 346 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|326499079|dbj|BAK06030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 517

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/441 (25%), Positives = 187/441 (42%), Gaps = 21/441 (4%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           L++ ++       G +  +      V          L       G     L     +  +
Sbjct: 35  LSQRFASTASNTDGRVHQVIGAVVDVKFDGEQLPAILNAVTTENGGQKLVLEVAQHLGEN 94

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +   E +  G  V   G    I       GR++N  G PID    + KG     
Sbjct: 95  VVRCIAMDGTEGLVRGRKVVDTGAPIMIPVGPGCLGRIMNVTGDPIDERGPI-KGTKLAP 153

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I ++ P  +++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 154 IHAEAPEFVDQSTSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 213

Query: 188 DKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTA 238
                S+   VGER RE  +   +         D   K  +V    +E P  R    LT 
Sbjct: 214 AHGGYSVFTGVGERTREGNDLYHEMQETGVIQLDGESKVALVFGQMNEPPGARARVALTG 273

Query: 239 VTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI
Sbjct: 274 LTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI 333

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S 
Sbjct: 334 --TTTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSK 391

Query: 358 SRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+ D      +     S +  ++  ++  +DI  I G     +      V +   +  F
Sbjct: 392 SRMLDPRIVGQEHYDTASKVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRF 450

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L Q     +   VF  I  KL
Sbjct: 451 LSQP---FTVAQVFTGIEGKL 468


>gi|113910754|gb|ABI48109.1| ATPase beta subunit [Monoclea forsteri]
          Length = 456

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G++ +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQDINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGGPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPV-EATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|32526541|emb|CAD39202.1| ATP synthase subunit B [Pennantia corymbosa]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|24940188|emb|CAD43376.1| ATP synthase beta subunit [Hydrophyllum canadense]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708173|emb|CAB90023.1| ATP synthase beta subunit [Bougainvillea glabra]
          Length = 448

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 16  KGRDTVGQPINVACEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 75

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 76  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 134

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 135 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 194

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 195 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 255 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 312

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 313 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 372

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 373 ILGLDELSEED-RLTVARARKIERFLSQP 400


>gi|41179057|ref|NP_958414.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
 gi|336667|gb|AAA84146.1| ATP synthase beta subunit [Chlamydomonas reinhardtii]
 gi|28269780|tpg|DAA00958.1| TPA_inf: CF1 ATP synthase beta subunit [Chlamydomonas reinhardtii]
 gi|213517439|gb|ACJ50145.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
 gi|217315587|gb|ACK37278.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
 gi|217315589|gb|ACK37279.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii]
          Length = 491

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/418 (27%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I  I   V   V    Q   + + +  + KNS         +V ++  D  V    + 
Sbjct: 21  GRIVQIIGPVLDIVFAKGQVPNIYNALTIRAKNSAGTEMAVTCEVQQLLGDNCVRAVSMN 80

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I    P  
Sbjct: 81  PTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 140 VDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 AGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 318 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQP 377

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +       S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 WILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|74225421|dbj|BAE31630.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT + +AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLAVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|114509206|gb|ABI75171.1| ATPase alpha subunit [Hydrocleys nymphoides]
          Length = 361

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 161/365 (44%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L +    G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGLKEIQS-GEMVEFA---SGVKGIALNLENENVGIVVFGSDTTIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL + +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGKGSLSENE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNQKAKENEKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|148543702|ref|YP_001271072.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri DSM 20016]
 gi|184153112|ref|YP_001841453.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri JCM 1112]
 gi|194468265|ref|ZP_03074251.1| ATP synthase F1, beta subunit [Lactobacillus reuteri 100-23]
 gi|227363319|ref|ZP_03847448.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri MM2-3]
 gi|227544493|ref|ZP_03974542.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri CF48-3A]
 gi|300909319|ref|ZP_07126780.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri SD2112]
 gi|325682073|ref|ZP_08161591.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri MM4-1A]
 gi|166990370|sp|A5VIR1|ATPB_LACRD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740212|sp|B2G691|ATPB_LACRJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148530736|gb|ABQ82735.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus reuteri DSM
           20016]
 gi|183224456|dbj|BAG24973.1| ATP synthase beta subunit [Lactobacillus reuteri JCM 1112]
 gi|194453118|gb|EDX42016.1| ATP synthase F1, beta subunit [Lactobacillus reuteri 100-23]
 gi|227071626|gb|EEI09920.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri MM2-3]
 gi|227185516|gb|EEI65587.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri CF48-3A]
 gi|300893184|gb|EFK86543.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri SD2112]
 gi|324978717|gb|EGC15666.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri MM4-1A]
          Length = 475

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 189/411 (45%), Gaps = 14/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCL--SQYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVG 76
           +  G +  +      V      +   + D +  +  +   L   + + L   +V    + 
Sbjct: 1   MSSGKVLQVIGPVVDVEFPLDEKLPEINDALKIKESDGKTLTTEVALELGDGVVRTIAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GRV N LG+P+D     G     M I    P  
Sbjct: 61  GTDGLQRGMEVENTGASISVPVGDDTLGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
            +     +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+ 
Sbjct: 121 DDLNNATEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + +K+ +V    +E P  R    LT +TIAEYF      
Sbjct: 181 TGVGERTREGNDMYYEMKASGVLEKTAMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSITSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            +V V  D++ DP   +  + LD    L R L + G YP VDPLAS S  L  +    + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLASTSTALTPEIVGKEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + + H++ R+ E +DI  I G     D      V +   I +FL QS
Sbjct: 359 YEVATQVQHVLQRYHELQDIISILGMDELSDEE-KTIVARARRIQNFLSQS 408


>gi|319761166|ref|YP_004125103.1| ATP synthase f1, beta subunit [Alicycliphilus denitrificans BC]
 gi|330823024|ref|YP_004386327.1| ATP synthase F1 subunit beta [Alicycliphilus denitrificans K601]
 gi|317115727|gb|ADU98215.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans BC]
 gi|329308396|gb|AEB82811.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans K601]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/413 (27%), Positives = 188/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           VQG  +  I +V        Q   + D +  +G       Q  ++   IV    +G  + 
Sbjct: 4   VQGKIVQCIGAVVDVEFPRDQMPKVYDALKLEGSALTLEVQ-QQLGDGIVRTIALGSSDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG PID    + + +L+  I  K P      
Sbjct: 63  LKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVSQ-ELTASIHRKAPAYDELS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +TIAE F  +
Sbjct: 182 ERTREGNDFYHEMSDSKVVVQEDLSQSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDE 241

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 242 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSIT 299

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     +
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPHVVGE 359

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E   +  ++   + R++E RDI  I G    +       V +   I  FL Q 
Sbjct: 360 EHYGVARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLTVARARKIQRFLSQP 411


>gi|183206626|gb|ACC54511.1| ATP synthase beta subunit [Githopsis diffusa]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 186/421 (44%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + ++ +G   D LGQ I +  ++        V   
Sbjct: 1   TGRIGQIIGPVLDVAFPPGKMPNIYNALLVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +    ++  I    
Sbjct: 59  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRITAPIHRSA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 118 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 177

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 178 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 237

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 238 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--T 295

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 296 STKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 355

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S D  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 356 LQPRIVSDDHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 414

Query: 420 S 420
            
Sbjct: 415 P 415


>gi|183206490|gb|ACC54443.1| ATP synthase beta subunit [Campanula aucheri]
          Length = 491

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  DNLGQ I +  ++        V   
Sbjct: 16  GRIGQIIGPVLDVAFPPGKMPYIYNALVV---KGRDNLGQPINVTCEVQQLLGNNRVRAV 72

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 73  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 131

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 132 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKTHGGV 191

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 192 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 251

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 252 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 309

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 310 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 369

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 370 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 428

Query: 420 S 420
            
Sbjct: 429 P 429


>gi|124361804|gb|ABN09344.1| ATP synthase beta subunit [Madhuca macrophylla]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 1   GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGKPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|24940260|emb|CAD43388.1| ATP synthase beta subunit [Phacelia grandiflora]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718163|gb|AAK72820.1| ATP synthase beta subunit [Paropsia madagascariensis]
          Length = 477

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GHIAQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTIGQQINVACEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 66  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYIEMKESGVINEENITESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPQIVGKEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|3850916|gb|AAC72150.1| ATP synthase beta subunit [Conospermum mitchellii]
          Length = 488

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQKINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    + H + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKHTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|3850988|gb|AAC72186.1| ATP synthase beta subunit [Grevillea baileyana]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQIAVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62085089|gb|AAX62951.1| ATP synthase beta subunit [Acalypha californica]
          Length = 482

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVVDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|229087793|ref|ZP_04219913.1| ATP synthase subunit beta [Bacillus cereus Rock3-44]
 gi|228695521|gb|EEL48386.1| ATP synthase subunit beta [Bacillus cereus Rock3-44]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKPISVPVGDATLGRVFNVLGDAIDLDGEVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|61968255|gb|AAX57054.1| ATP synthase beta subunit [Lachnostylis bilocularis]
 gi|61968257|gb|AAX57055.1| ATP synthase beta subunit [Leptopus cordifolius]
 gi|61968259|gb|AAX57056.1| ATP synthase beta subunit [Leptopus colchicus]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEANIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|18075919|emb|CAD11916.1| ATP synthase beta subunit [Forgesia racemosa]
          Length = 458

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIG 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|21633383|gb|AAM52166.1| ATP synthase beta subunit [Wilsonia backhousei]
          Length = 478

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 182/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     Q   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 9   GRIVQIIGPVLDVAFPPGQMPNIYNALVVQGRDNEQTNVTCEVQQLVGNNRVRAVAMSDT 68

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 69  AGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TKTTSPIHRSAPAFVQ 127

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 128 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 187

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 188 VGERTREGNDLYMEMKESGVINEEDIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 247

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 248 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 305

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 306 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 365

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|5758895|gb|AAD50869.1| ATP synthase beta subunit [Maranta bicolor]
          Length = 496

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVDTSTTS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|305671661|gb|ADM63140.1| ATP synthase beta subunit [Diervilla sessilifolia]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKGGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGKKHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61968313|gb|AAX57083.1| ATP synthase beta subunit [Savia bojeriana]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|61968297|gb|AAX57075.1| ATP synthase beta subunit [Poranthera corymbosa]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTSGQQINVVCEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  S  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--SSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G +T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGFLTSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|7708491|emb|CAB89939.1| ATP synthase beta subunit [Megacarpaea polyandra]
          Length = 482

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDILGQEINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|14718013|gb|AAK72748.1| ATP synthase beta subunit [Cneorum pulverulentum]
          Length = 476

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 10  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 66

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 67  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPID-TRTTSPIHKSA 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 126 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 185

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 186 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 245

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 246 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 304 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 364 LQPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 422

Query: 420 S 420
            
Sbjct: 423 P 423


>gi|6467935|gb|AAF13234.1|AF197601_1 ATPase beta subunit [Triglochin maritima]
          Length = 476

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    L     +  I    P
Sbjct: 64  MSATDGLRRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPLD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|7708317|emb|CAB90085.1| ATP synthase beta subunit [Gonocaryum litorale]
 gi|11558458|emb|CAC17758.1| ATP synthase subunit B [Gonocaryum litorale]
          Length = 485

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQPINVTCEVQXLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|7708181|emb|CAB90031.1| ATP synthase beta subunit [Betula pendula]
          Length = 492

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 170/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 49  GRDTAGQXINVTCEVQQLLGNXRVRAVAMSATDGLTRGMEVIDTGASLSVPVGGATLGRI 108

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 109 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 167

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 168 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 227

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 228 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 287

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD
Sbjct: 288 GRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPAPATTFAHLD 345

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 346 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 405

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 406 LGLDELSEED-RLTVARARKIERFLSQP 432


>gi|37729412|gb|AAN71672.1| ATP synthase beta subunit [Betula platyphylla]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKEXGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|11583|emb|CAA25114.1| ATPase, beta subunit [Hordeum vulgare]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 183/426 (42%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S +     G I  I      VT    +   + + +V Q +++     +   +V ++  + 
Sbjct: 13  STSEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNN 72

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G    +       GR+ N LG+P+D    +     +  
Sbjct: 73  RVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFP 131

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 132 IHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 191

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 192 AHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGL 251

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 252 TALTMAEYFRDVNKQDVLLFIDDIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQE 311

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 312 RIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLD 369

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 370 STSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIE 428

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 429 RFLSQP 434


>gi|50401827|sp|P62614|ATPB_AEGCR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50401828|sp|P62626|ATPB_AEGCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|343981|dbj|BAA01870.1| ATP synthase beta subunit [Aegilops columnaris]
 gi|343984|dbj|BAA01872.1| ATP synthase beta subunit [Aegilops crassa]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|325662851|ref|ZP_08151420.1| ATP synthase subunit beta [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086567|ref|ZP_08335645.1| ATP synthase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470903|gb|EGC74132.1| ATP synthase subunit beta [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330410400|gb|EGG89832.1| ATP synthase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 463

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 190/420 (45%), Gaps = 18/420 (4%)

Query: 24  GYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ I      V     Q   + + +     N + L  V+     +  D V    +G  
Sbjct: 7   GKITQIIGAVLDVKYAEGQLPEINEAIEITRSNGEKL--VVEVAQHLGDDTVRCIAMGPT 64

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G D V       +       GR+ N LG+ ID   +    +    I  K P    
Sbjct: 65  DGLVRGMDAVATGAPITVPVGEHTLGRIFNVLGEAIDEKPAPTDVEYE-PIHRKAPTFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   
Sbjct: 124 QATEAEMLETGIKVIDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG  +V
Sbjct: 184 VGERTREGNDLYYEMTESGVINKTAMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD  +VL+R++ E G YP VDPL S SR+ D      +   
Sbjct: 302 VYVPADDLTDPAPATTFAHLDAKVVLSRAITELGIYPAVDPLESSSRMLDPHIVGEEHYN 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +  ++ +++E +DI  + G     +      V +   I  FL Q     +    F+
Sbjct: 362 VARGVQEILQKYKELQDIIAMLGMDELSEDD-KLTVSRARKIQRFLSQPFFVATQFTGFE 420


>gi|156598339|gb|ABU85430.1| ATP synthase CF1 beta subunit [Musa acuminata]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|124361632|gb|ABN09258.1| ATP synthase beta subunit [Diospyros cayennensis]
          Length = 454

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V+     +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVSFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910858|gb|ABI48161.1| ATPase beta subunit [Dicranella heteromalla]
          Length = 470

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 26  KGQNTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGEATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGEPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEEKIS 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLTVARARKIERFLSQP 410


>gi|303237172|ref|ZP_07323742.1| ATP synthase F1, alpha subunit [Prevotella disiens FB035-09AN]
 gi|302482559|gb|EFL45584.1| ATP synthase F1, alpha subunit [Prevotella disiens FB035-09AN]
          Length = 527

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 89/433 (20%), Positives = 166/433 (38%), Gaps = 37/433 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +I+     +  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTISDGVARIYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCILLGPTAGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +   +   M +  K P  + RQ
Sbjct: 85  KEGQSVKRTHRIASIRVNDNFLGRVVNPLGQAIDGKGEIDLSESFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKGVDSMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKGFYEQGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   ++          +++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVANLVQTLRDHGALPYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGHS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINDQQEIAEKMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPECMKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQVKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDKVTAMTLDRGR 441

Query: 412 IIYDFLKQSPSDL 424
                L Q   + 
Sbjct: 442 KNNQLLIQPQYNP 454


>gi|183206654|gb|ACC54525.1| ATP synthase beta subunit [Hanabusaya asiatica]
          Length = 472

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V   +  +       VV   K  D LGQ I +  ++        V   
Sbjct: 2   GRIGQIIGPVLDVAFPAGKMPNIYNALVV---KGRDTLGQPINVTCEVQQLLGNNRVRAV 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 59  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 118 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 177

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 178 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 237

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 238 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 295

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 296 STKKGSITSIQAVXVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 355

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 356 LQPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 414

Query: 420 S 420
            
Sbjct: 415 P 415


>gi|61968277|gb|AAX57065.1| ATP synthase beta subunit [Meineckia phyllanthoides]
 gi|61968329|gb|AAX57091.1| ATP synthase beta subunit [Zimmermanniopsis uzungwaensis]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVIKGRDTAGQQINVICEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|5758873|gb|AAD50847.1| ATP synthase beta subunit [Cymbocarpa refracta]
          Length = 496

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRITQIIGPVLDVIFPPGKMPNIYNALVIKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMKVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|319902308|ref|YP_004162036.1| ATP synthase F1, alpha subunit [Bacteroides helcogenes P 36-108]
 gi|319417339|gb|ADV44450.1| ATP synthase F1, alpha subunit [Bacteroides helcogenes P 36-108]
          Length = 528

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/457 (21%), Positives = 175/457 (38%), Gaps = 42/457 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE +    +      + + G +  ++     +  L +     + +           
Sbjct: 15  LRKQLEGIDTRVQ------LDEIGTVLQVSDGVARIYGL-RNAEANELLEFDNG---IKA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G  V    R   I       GRVI+ LG+P+DG   +
Sbjct: 65  IVMNLEEDNVGAVLLGPTDKIKEGYTVKRTKRIASIMVGESMLGRVIDPLGEPLDGKGLI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
           G     M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 125 GGELCEMPLERKAPGVIFRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 184

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            T+++     +  D    I   +G++G  V   +           ++VV AT+ +   L+
Sbjct: 185 DTIINQRKNYEAGDPVYCIYVAIGQKGSTVASIVNTLRQYGAMDYTIVVAATAGDPAALQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G + L+I D +++ A + RE++           YP  +F    
Sbjct: 245 YYAPFAGAAIGEYFRDTGRHALVIYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 304

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 305 RLLERAAKIISQEEVAREMNDLPDSLKSKVKGGGSLTALPIIETQAGDVSAYIPTNVISI 364

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+ +L  +G  P +D   SVSR+   A     KK+  +L     ++ E      
Sbjct: 365 TDGQIFLDTNLFNQGNRPAIDVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---A 421

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +D +    + +       L Q      S +
Sbjct: 422 FTKFSGDMDPVTALTIDKGQKNTRLLVQPQYSPMSVE 458


>gi|270313031|gb|ACZ73597.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KSRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        D  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|229105898|ref|ZP_04236522.1| ATP synthase subunit beta [Bacillus cereus Rock3-28]
 gi|228677472|gb|EEL31725.1| ATP synthase subunit beta [Bacillus cereus Rock3-28]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGDVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|62085114|gb|AAX62963.1| ATP synthase beta subunit [Conceveiba martiana]
          Length = 480

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|88705417|ref|ZP_01103128.1| ATP synthase beta chain [Congregibacter litoralis KT71]
 gi|88700507|gb|EAQ97615.1| ATP synthase beta chain [Congregibacter litoralis KT71]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 185/414 (44%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G +  I      V      V  + D +    K+     Q  ++   +V    +G  E
Sbjct: 1   MSSGRVVQIIGAVIDVEFPRDSVPRVYDALKITEKDITLEVQ-QQLGDGVVRTIAMGSSE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S G  V + G    +       GR+++ LG PID    +G+ +    I    P     
Sbjct: 60  GLSRGLGVDNTGAPIAVPVGGETLGRIMDVLGNPIDERGPIGEKE-RASIHRAAPTYEEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              +   +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYYEMQESKVVDIENPSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 239 EGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGALQERI--TSTKTGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     
Sbjct: 297 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLIG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 NEHYEAARGVQNVLQRYKELKDIIAILGMDELSEED-KQTVDRARKIERFLSQP 409


>gi|297840991|ref|XP_002888377.1| ATPase beta subunit [Arabidopsis lyrata subsp. lyrata]
 gi|297334218|gb|EFH64636.1| ATPase beta subunit [Arabidopsis lyrata subsp. lyrata]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +++I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFINNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|291333931|gb|ADD93610.1| ATP synthase F1 alpha subunit [uncultured marine bacterium
           MedDCM-OCT-S04-C40]
          Length = 508

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/444 (21%), Positives = 178/444 (40%), Gaps = 26/444 (5%)

Query: 1   MQKNLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   L+ + AQ+A   +       G +  I      +  L+    + + +      +   
Sbjct: 1   MSNLLQDIEAQIAGAKTDVARENVGVVREIGDGVAKIEGLT-GAMMNEMLDF---GNGVT 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +    V    +G    I+ G  V   G+   +       GRV++ALG+PID    
Sbjct: 57  GLALNLEETEVGAVILGDHTGIAEGQEVRTTGKLLSVPVGKSLLGRVVDALGRPIDDKGD 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           LG  + +  +    P  ++RQ V++  +TGI  +D   P+  GQR  +      GK+ + 
Sbjct: 117 LG-AETNYPVEKIAPGIVSRQSVDQPLQTGIMPVDAMIPIGRGQRELIIGDRQTGKTAVA 175

Query: 179 SMFARSDCF-------------DKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATS 224
                ++                  I   VG++   V + I+D       + ++VV AT+
Sbjct: 176 IDAIINNARINKENEGVEGFRPVYSIYVAVGQKRANVAKVIQDLTDAGAMEHTIVVAATA 235

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            +S   + +AP +  ++ E+F     + L++ D +++ A + R+++           YP 
Sbjct: 236 SDSATNQYLAPFSGASMGEWFMDNNMDALIVYDDLSKHAVAYRQVSLVLKRPSGREAYPG 295

Query: 285 SVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L
Sbjct: 296 DVFYLHSRLLERAARLRADAGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDL 355

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P +    SVSR+   A     K++  ++   + +F E   +     +   +D  
Sbjct: 356 FYQGVRPAISVGLSVSRVGSAAQVKAMKQVAGTVKLELAQFRE---LAAFAQFGSDLDDA 412

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS 426
               + +   I +  KQ      S
Sbjct: 413 TKAKLERGKRIVEVFKQPQFKPVS 436


>gi|258422897|ref|ZP_05685797.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9635]
 gi|257846921|gb|EEV70935.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9635]
          Length = 470

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 186/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + + +      I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISESVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|183206646|gb|ACC54521.1| ATP synthase beta subunit [Campanula peregrina]
          Length = 473

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|163854647|ref|YP_001628945.1| F0F1 ATP synthase subunit beta [Bordetella petrii DSM 12804]
 gi|190358261|sp|A9HY42|ATPB_BORPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|163258375|emb|CAP40674.1| ATP synthase beta chain [Bordetella petrii]
          Length = 466

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G    +       GR+++ LG+PID    + + D
Sbjct: 52  LGDGVVRTIALGSSDGLRRGMKVVGTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-ESD 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 EKRAIHQTAPRFDELSPSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +     +  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMEESKVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 231 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIAALGIYPAVDPLDSSSR 348

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +   +   + R++E RDI  I G          +AV +   I  FL 
Sbjct: 349 QLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILGMDELS-PDDKQAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|150005516|ref|YP_001300260.1| F0F1 ATP synthase subunit alpha [Bacteroides vulgatus ATCC 8482]
 gi|254884065|ref|ZP_05256775.1| ATP synthase F1 sector subunit alpha [Bacteroides sp. 4_3_47FAA]
 gi|294778718|ref|ZP_06744137.1| ATP synthase F1, alpha subunit [Bacteroides vulgatus PC510]
 gi|319640739|ref|ZP_07995452.1| ATP synthase subunit alpha [Bacteroides sp. 3_1_40A]
 gi|158513741|sp|A6L4M4|ATPA_BACV8 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|149933940|gb|ABR40638.1| ATP synthase alpha chain [Bacteroides vulgatus ATCC 8482]
 gi|254836858|gb|EET17167.1| ATP synthase F1 sector subunit alpha [Bacteroides sp. 4_3_47FAA]
 gi|294447374|gb|EFG15955.1| ATP synthase F1, alpha subunit [Bacteroides vulgatus PC510]
 gi|317387551|gb|EFV68417.1| ATP synthase subunit alpha [Bacteroides sp. 3_1_40A]
          Length = 530

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 98/446 (21%), Positives = 173/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  +    +L   + G +  ++     +  L +     + +  +      +  V+ 
Sbjct: 12  EVLLQQLKGIDTHLQFDEVGNVLQVSDGVARIYGL-RNAEANELLEFENG---IMAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V    R   I+      GRVI+ LG P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDQIKEGMVVKRTKRIASINVGEGMLGRVIDPLGVPLDGRGQIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK      T+L
Sbjct: 128 CEMPLERKAPGVIFRQPVNQPLQTGLKSVDAMIPIGRGQRELIIGDRQTGKTSIAIDTIL 187

Query: 179 SMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +  +  +       I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQKSNYEAGKPVYCIYVAIGQKGSTVASLVNTLRERGAMDYTIVVAATAADPAALQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRDALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQQEVAEQMNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +   A+ +       L Q  
Sbjct: 425 SSDMDPVTAMAIDRGRKNNQLLIQPQ 450


>gi|124361710|gb|ABN09297.1| ATP synthase beta subunit [Diospyros montana]
 gi|124361730|gb|ABN09307.1| ATP synthase beta subunit [Diospyros rhombifolia]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQSINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910846|gb|ABI48155.1| ATPase beta subunit [Atrichum angustatum]
          Length = 472

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GK  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 34  GKEVNVTCEVQQLLGNNKVRAVAMSATDGLRRGLKVIDTGAPLSVPVGEATLGRIFNVLG 93

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 94  EPVDNLGPVDAS-TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 152

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 153 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 212

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 213 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 272

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 273 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 331 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDE 390

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 391 LSEED-RLTVARARKIERFLSQP 412


>gi|33327745|gb|AAQ09236.1| ATP synthase beta subunit [Cornus mas]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLXVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLIVARARKIERFLSQP 426


>gi|212896630|gb|ACJ38518.1| membrane-bound ATP synthase subunit B [Psophocarpus tetragonolobus]
          Length = 466

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|212695023|ref|ZP_03303151.1| hypothetical protein BACDOR_04561 [Bacteroides dorei DSM 17855]
 gi|237710541|ref|ZP_04541022.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. 9_1_42FAA]
 gi|237727037|ref|ZP_04557518.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. D4]
 gi|265750317|ref|ZP_06086380.1| ATP synthase F1, alpha subunit [Bacteroides sp. 3_1_33FAA]
 gi|212662339|gb|EEB22913.1| hypothetical protein BACDOR_04561 [Bacteroides dorei DSM 17855]
 gi|229433893|gb|EEO43970.1| F0F1 ATP synthase subunit alpha [Bacteroides dorei 5_1_36/D4]
 gi|229455263|gb|EEO60984.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. 9_1_42FAA]
 gi|263237213|gb|EEZ22663.1| ATP synthase F1, alpha subunit [Bacteroides sp. 3_1_33FAA]
          Length = 530

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 98/446 (21%), Positives = 174/446 (39%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           E L Q  +  + +L   + G +  ++     +  L +     + +  +      +  V+ 
Sbjct: 12  EVLLQQLKGINTHLQFDEVGNVLQVSDGVARIYGL-RNAEANELLEFENG---IMAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V    R   I+      GRVI+ LG P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDQIKEGMVVKRTKRIASINVGEGMLGRVIDPLGVPLDGRGQIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK      T+L
Sbjct: 128 CEMPLERKAPGVIFRQPVNQPLQTGLKSVDAMIPIGRGQRELIIGDRQTGKTSIAIDTIL 187

Query: 179 SMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +  +  +       I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQKSNYEAGKPVYCIYVAIGQKGSTVASLVNTLRERGAMDYTIVVAATAADPAALQYFAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRDALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R      +                     G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIINQQEVAEQMNDLPPSLKGKVKAGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D +   A+ +       L Q  
Sbjct: 425 SSDMDPVTAMAIDRGRKNNQLLIQPQ 450


>gi|157325537|ref|YP_001468315.1| ATP synthase CF1 beta subunit [Ipomoea purpurea]
 gi|190358672|sp|A7Y3E6|ATPB_IPOPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|157056765|gb|ABV02355.1| ATP synthase CF1 beta subunit [Ipomoea purpurea]
          Length = 499

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|313760420|dbj|BAJ41240.1| ATP synthase beta subunit [Mesocricetus auratus]
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFVEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|4731151|gb|AAD28365.1|AF095731_1 ATP synthase beta subunit [Berzelia lanuginosa]
          Length = 467

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 37  KGRDTVGQSINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 96

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 97  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 155

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 156 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 215

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 216 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 275

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 276 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 333

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 334 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 393

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 394 ILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|238917847|ref|YP_002931364.1| ATP synthase [Eubacterium eligens ATCC 27750]
 gi|238873207|gb|ACR72917.1| ATP synthase [Eubacterium eligens ATCC 27750]
          Length = 475

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 14/407 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G I+ +      +      +   +  ++         + +V   +  D+V    +G  + 
Sbjct: 18  GKITQVIGAVIDIKFTDGNLPEINSAINIKTNDGGKLVVEVAQHLGDDVVRCIAMGPTDG 77

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR+ N LG+PID   +  +    M I  K P    + 
Sbjct: 78  LVRGMEAEATGAPISVPVGEQTLGRMFNVLGEPIDNKPA-PEVQEHMPIHRKAPAFAEQA 136

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VG
Sbjct: 137 TNTEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVG 196

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   + +    ++K+ +V    +E P  R    L  +T+AEYF  KG  +VLL
Sbjct: 197 ERTREGNDLYHEMMESGVIEKTTMVFGQMNEPPGARMRVGLAGLTMAEYFRDKGGKDVLL 256

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V 
Sbjct: 257 FIDNIYRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVY 314

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D      +  K+ 
Sbjct: 315 VPADDLTDPAPATTFAHLDATTVLSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVA 374

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            S+  ++ +++E +DI  I G     +      V +   +  FL Q 
Sbjct: 375 RSVQEILQKYKELQDIIAILGMDELSEDD-KLVVSRARKVQRFLSQP 420


>gi|312437479|gb|ADQ76550.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 470

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 186/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V    + V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHKEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|183206676|gb|ACC54536.1| ATP synthase beta subunit [Campanula rotundifolia]
          Length = 477

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKLA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|219552240|gb|ACL26835.1| ATP synthase beta chain [Phyllanthus amarus]
          Length = 423

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVSFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|12004133|gb|AAG43906.1|AF213775_1 ATP synthase beta subunit [Androsace sp. Anderberg s.n.]
          Length = 483

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V+     +       VV   K  D  GQ I +  ++        V   
Sbjct: 21  GRIIQIIGPVLDVSFPPGNMPNIYNALVV---KGRDTAGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G   R+       GR+ N LG+P+D    +     S  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGTALRVPVGGATLGRIFNVLGEPVDNLGPVDTXTTS-PIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFGQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|3023341|sp|O03069|ATPB_EQUAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1934690|gb|AAB51732.1| ATP synthase beta chain [Equisetum arvense]
          Length = 473

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V   + +   + +  + +G+N    GQ I +  ++        V    
Sbjct: 21  GYITQIIGPVLDVAFPVGKMPNIFNSFIVKGQNPA--GQSINVTCEVQQLLGNNKVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +      I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNMGPV-EATAKSPIHKPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             M+ +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFMDLETTVSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGCLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYEVAQGVKQTLQRYKELQDIIAILGLDELSEQD-RLLVARARKIERFLSQP 434


>gi|195183507|dbj|BAG66967.1| ATP synthase beta subunit [Hybanthus galeottii]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTSGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMAVVDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|164597807|ref|NP_084663.2| ATP synthase CF1 beta subunit [Oenothera elata subsp. hookeri]
 gi|169142844|ref|YP_001687267.1| ATP synthase beta subunit [Oenothera glazioviana]
 gi|169142929|ref|YP_001687351.1| ATP synthase beta subunit [Oenothera biennis]
 gi|169143015|ref|YP_001687435.1| ATP synthase beta subunit [Oenothera parviflora]
 gi|172045790|sp|Q9MTP7|ATPB_OENEH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|190358691|sp|B0Z4U4|ATPB_OENBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|190358692|sp|B0Z528|ATPB_OENGL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|190358693|sp|B0Z5B2|ATPB_OENPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|159793102|gb|ABW98856.1| ATP synthase beta subunit [Oenothera biennis]
 gi|159895456|gb|ABX10021.1| ATP synthase beta subunit [Oenothera glazioviana]
 gi|159895541|gb|ABX10105.1| ATP synthase beta subunit [Oenothera parviflora]
 gi|162423674|emb|CAB67128.2| ATP synthase beta subunit [Oenothera elata subsp. hookeri]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V   
Sbjct: 20  SGRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTGGQEINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGDEHYETAQRVKETLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|110915686|gb|ABH02631.1| ATP synthase beta subunit [Podagrostis thurberiana]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVAJVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118430395|ref|YP_874660.1| ATP synthase CF1 beta subunit [Hordeum vulgare subsp. vulgare]
 gi|126302525|sp|P00828|ATPB_HORVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|118201049|gb|ABK79420.1| ATP synthase CF1 beta subunit [Hordeum vulgare subsp. vulgare]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 184/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S +     G I  I      VT    +   + + +V Q +++     +   +V ++  + 
Sbjct: 13  STSEEKSTGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNN 72

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G    +       GR+ N LG+P+D    +     +  
Sbjct: 73  RVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFP 131

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 132 IHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 191

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 192 AHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGL 251

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 252 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQE 311

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 312 RIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLD 369

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 370 STSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIE 428

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 429 RFLSQP 434


>gi|21633321|gb|AAM52135.1| ATP synthase beta subunit [Merremia peltata]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V    + +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPRKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|145342447|ref|XP_001416194.1| ATP synthase beta chain, mitochondrial precursor [Ostreococcus
           lucimarinus CCE9901]
 gi|144576419|gb|ABO94487.1| ATP synthase beta chain, mitochondrial precursor [Ostreococcus
           lucimarinus CCE9901]
          Length = 530

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/425 (25%), Positives = 188/425 (44%), Gaps = 20/425 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIV 70
           A  Y+    +  G ++ +      V    Q   +   +  +G +   + +V   +  + V
Sbjct: 49  ARTYASAKSIGAGKVTQVIGAVVDVQFDDQLPPILSALEVEGHDVRLVLEVAQHLGENTV 108

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   E +  G  V + G   +I       GR++N +G+PID    +     S+ I 
Sbjct: 109 RTIAMDTTEGLVRGQTVNNTGSPIQIPVGRATLGRIMNVIGEPIDECGPISTS-TSLGIH 167

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
            + PP +++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +     
Sbjct: 168 REAPPFVDQSTEMEMLVTGIKVVDLLAPYQKGGKIGLFGGAGVGKTVFIMELINNIAKGH 227

Query: 190 V---IISLVGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLT 237
               + + VGER RE  +   + +              K  +V    +E P  R    LT
Sbjct: 228 GGFSVFAGVGERTREGNDLYHEMIEGGVIKLGDQASDSKCTLVYGQMNEPPGARARVGLT 287

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ ++L  L ER
Sbjct: 288 GLTVAEYFRDFEGQDVLFFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQER 347

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S
Sbjct: 348 I--TTTTKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRSIAEIGIYPAVDPLDS 405

Query: 357 VSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            SR+       DE       +  ++  ++  +DI  I G     +      V +   +  
Sbjct: 406 TSRMLSPLTLGDEHYNTARGVQKILQDYKNLQDIIAILGMDELSEDD-KLTVSRARKVQR 464

Query: 416 FLKQS 420
           FL Q 
Sbjct: 465 FLSQP 469


>gi|118917410|dbj|BAF40516.1| ATP synthase beta subunit [Drypetes littoralis]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V + +N   +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNALVVKSQN--TVGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHKSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINGENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPKIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|24940184|emb|CAD43374.1| ATP synthase beta subunit [Emmenanthe penduliflora]
          Length = 485

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|7708658|emb|CAB89995.1| ATP synthase beta subunit [Stackhousia minima]
          Length = 486

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 174/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  + +G+V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 47  GQTINVIGEVQQLLGNNQVRAVAMSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLG 106

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +  +     F+TGI+V+D+  P   G +IG+F G+
Sbjct: 107 EPVDNLGPVD-TRTTSPIHKSAPAFIELETKFSIFETGIKVVDLLAPYRRGGKIGLFGGA 165

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 166 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVAL 225

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 226 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 285

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 286 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 343

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 344 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDE 403

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 404 LSEED-RLTVARARKIERFLSQP 425


>gi|5758877|gb|AAD50851.1| ATP synthase beta subunit [Dimerocostus strobilaceus]
          Length = 496

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    L     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPLDTSTTS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|23011134|ref|ZP_00051589.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase
           [Magnetospirillum magnetotacticum MS-1]
          Length = 339

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 186/335 (55%), Positives = 253/335 (75%)

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           RV++ALG+P+DG   L +G  S+ + +  P AM R RV+    TG+R ID+FTPLC GQR
Sbjct: 4   RVVDALGRPVDGLGPLQEGGDSVALDADPPSAMTRARVKTPLLTGVRAIDLFTPLCAGQR 63

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223
           IG+FAGSG+GKSTLL+M A ++ FD V+++LVGERGREVREF+E  +     ++V+VV+T
Sbjct: 64  IGIFAGSGVGKSTLLAMLAGAEGFDSVVVALVGERGREVREFLEGPIAAVRDRAVIVVST 123

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
            DESP++R+ AP  A+ +AE F  +G++VLLI+DS+TR+AH+ R++A  +GE  VARGYP
Sbjct: 124 GDESPMMRRQAPKVALAVAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYP 183

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SVFS+LPRLLER GP  + KG IT + SVLVDGD+HNDP+ADS+R  LDGH+VL+R++A
Sbjct: 184 PSVFSDLPRLLERAGPGAEGKGAITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIA 243

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E+GRYP +D L S+SRLA + WS D+++LV  L  ++ RFEETRD+RL+GGYR G D  L
Sbjct: 244 EQGRYPAIDLLGSISRLAGEVWSGDQRELVRKLKTMMARFEETRDLRLMGGYRAGSDPDL 303

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           D+AV  VP IY+ L+Q P    S D F E+ + L+
Sbjct: 304 DQAVTLVPRIYEALRQEPGQPPSRDAFLELAQSLR 338


>gi|183206632|gb|ACC54514.1| ATP synthase beta subunit [Githopsis pulchella]
          Length = 485

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/423 (27%), Positives = 187/423 (44%), Gaps = 29/423 (6%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
            + G I  I      V     +   + + ++ +G   D LGQ I +  ++        V 
Sbjct: 5   TKSGRIGQIIGPVLDVAFPPGKMPNIYNALLVKG--RDTLGQPINVTCEVQQLLGNNRVR 62

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+PID    +    ++  I  
Sbjct: 63  AVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRITAPIHR 121

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 122 SAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 181

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+
Sbjct: 182 GVSVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTAL 241

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 242 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI- 300

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 301 -TSTKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 359

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +      S D  +   S+   + R++E +DI  I G     +      V +   I  FL
Sbjct: 360 TMLQPRIVSDDHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFL 418

Query: 418 KQS 420
            Q 
Sbjct: 419 SQP 421


>gi|61968323|gb|AAX57088.1| ATP synthase beta subunit [Uapaca littoralis]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFRPGKMPNIYNALVVRG--RDIAGQEINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  ++    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALIYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|16943743|emb|CAD10756.1| ATP synthase, beta subunit [Iphigenia indica]
          Length = 488

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVVFSPGRMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +         +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSILETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEKNITDSKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|73968434|ref|XP_857891.1| PREDICTED: similar to ATP synthase beta chain, mitochondrial
           precursor isoform 3 [Canis familiaris]
          Length = 527

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/440 (25%), Positives = 196/440 (44%), Gaps = 25/440 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLV------VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           ++ +   L Q A DY+             G I ++      V        + + +  QG+
Sbjct: 32  LRASPAAL-QSARDYATQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGR 90

Query: 55  NSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKP 112
            +  + +V   +    V    +   E +  G  V   G   +I       GR++N +G+P
Sbjct: 91  ETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEP 150

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           ID    + K      I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+
Sbjct: 151 IDERGPI-KTKQLWAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 209

Query: 173 GKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVA 222
           GK+ L+     +         + + VGER RE  +   + +        D   K  +V  
Sbjct: 210 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVTLVYG 269

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A G
Sbjct: 270 QMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVG 329

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R+
Sbjct: 330 YQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 387

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +AE G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G     +
Sbjct: 388 IAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILGMDELSE 447

Query: 401 LILDKAVHQVPIIYDFLKQS 420
                 V +   I  FL Q 
Sbjct: 448 ED-KLTVSRARKIQRFLSQP 466


>gi|259503682|ref|ZP_05746584.1| ATP synthase F1 sector subunit beta [Lactobacillus antri DSM 16041]
 gi|259168314|gb|EEW52809.1| ATP synthase F1 sector subunit beta [Lactobacillus antri DSM 16041]
          Length = 475

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 14/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCL--SQYVCLGD-FVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +  G +  +      V      +   + D   + +  +     +V + +   +V    + 
Sbjct: 1   MSSGKVVQVIGPVVDVEFPLDEKLPEINDALKIKESDDKTLTTEVALELGDGVVRTIAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GRV N LG+P+D     G     M I    P  
Sbjct: 61  GTDGLQRGMEVENTGASISVPVGDDTLGRVFNVLGEPVDNGPEFGPDAKRMPIHRDAPKY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+ 
Sbjct: 121 DELNNNTEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + +K+ +V    +E P  R    LT +TIAEYF      
Sbjct: 181 TGVGERTREGNDMYYEMKASGVLEKTAMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSITSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            +V V  D++ DP   +  + LD    L R L + G YP VDPL S S  L  +    + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLESTSTALTPEIVGKEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + + H++ R+ E +DI  I G     D      V +   I +FL QS
Sbjct: 359 YEVATQVQHVLQRYHELQDIISILGMDELSDEE-KTIVARARRIQNFLSQS 408


>gi|188589828|ref|YP_001919898.1| F0F1 ATP synthase subunit beta [Clostridium botulinum E3 str.
           Alaska E43]
 gi|251780163|ref|ZP_04823083.1| ATP synthase F1, beta subunit [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|226740180|sp|B2UZK0|ATPB_CLOBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|188500109|gb|ACD53245.1| ATP synthase F1, beta subunit [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243084478|gb|EES50368.1| ATP synthase F1, beta subunit [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 463

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 119/406 (29%), Positives = 192/406 (47%), Gaps = 14/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S  +  L + +         + +V   +  DIV    +   E +
Sbjct: 6   GKVVQVIGPVVDIKFDSDSLPNLYNAISIDMGERTLIAEVEQHVGDDIVRTIAMEATEGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V       +       GR+ N LGKPID    +   ++   I    P   ++  
Sbjct: 66  KRGMDAVDTEKAISVPVGDKVLGRLFNVLGKPIDNAGEVEAEEI-YPIHRPAPSFKDQAV 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 125 EPEMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG +VLL +
Sbjct: 185 RSREGNDLYHEMRESGVIDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFI 244

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 245 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVP 302

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  S LD   VL+RS+ E G YP VDPL S SR+ D      +   + + 
Sbjct: 303 ADDLTDPAPATTFSHLDATTVLSRSIVELGIYPAVDPLESSSRILDPRLVGEEHYNVATK 362

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
           + +++ R++E +DI  I G     D   DKA V +   +  FL Q 
Sbjct: 363 VKNILERYKELQDIIAILGVDELSDE--DKAVVSRARKVQRFLSQP 406


>gi|156530107|gb|ABU75150.1| AtpB [Brucea ferruginea]
          Length = 467

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 1   GHIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|155029333|dbj|BAF75550.1| ATP synthase beta subunit [Cnidoscolus aconitifolius]
          Length = 489

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910880|gb|ABI48172.1| ATPase beta subunit [Ptychomitrium incurvum]
          Length = 472

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|6689235|emb|CAB65397.1| ATP synthase beta subunit [Symphoricarpos albus]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTQLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGQNHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|317178126|dbj|BAJ55915.1| flagellum-specific ATP synthase [Helicobacter pylori F16]
          Length = 434

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 157/424 (37%), Positives = 232/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID    L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   +  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|305671619|gb|ADM63119.1| ATP synthase beta subunit [Cussonia spicata]
          Length = 477

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|258647879|ref|ZP_05735348.1| ATP synthase F1, alpha subunit [Prevotella tannerae ATCC 51259]
 gi|260851711|gb|EEX71580.1| ATP synthase F1, alpha subunit [Prevotella tannerae ATCC 51259]
          Length = 527

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 174/443 (39%), Gaps = 36/443 (8%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L QL +   K    + G + ++      V  LS  V   + V  +      +G  + +  
Sbjct: 15  LQQLKDINIKVKFEEVGVVLTVGDGVSRVYGLS-NVTENELVQFENG---VMGVAMNLEE 70

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V +  +G  E I  G  V    R   I  S    GRVIN LG P+DG  ++G     M
Sbjct: 71  DNVGVVLLGPSEGIKEGQSVKRTDRVASIEVSDEMLGRVINPLGTPLDGAGAIGGEKYLM 130

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +      +  
Sbjct: 131 PLDRKAPGVIYRQPVNQALQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQR 190

Query: 187 FD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238
            +         I   +G++   V   +E    +     +++V AT+ E   L+  AP   
Sbjct: 191 ENFEKGDPVYCIYVAIGQKASTVAATVETLKKNGAMPYTIIVSATASEPAALQYFAPFAG 250

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             I EYF  +G + L++ D +++ A + RE++           YP  VF    RLLER  
Sbjct: 251 AAIGEYFRDRGLSALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAA 310

Query: 299 PSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
               +                     G++TA+  +     + +  I  +V SI DG I L
Sbjct: 311 KINNQDEVAANMNDLPECMQGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYL 370

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           + +L   G+ P +D   SVSR+   A     KK+  +L     ++ E         +   
Sbjct: 371 DTNLFNRGQRPAIDVGISVSRVGGAAQIKSMKKVAGTLKIDQAQYRELE---SFAKFSSD 427

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D +    + +       L Q  
Sbjct: 428 MDPVTAMTIDRGRKNNVLLIQKQ 450


>gi|229164252|ref|ZP_04292185.1| ATP synthase subunit beta [Bacillus cereus R309803]
 gi|228619192|gb|EEK76085.1| ATP synthase subunit beta [Bacillus cereus R309803]
          Length = 468

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 48  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGDVP 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 346 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|281420259|ref|ZP_06251258.1| ATP synthase F1, alpha subunit [Prevotella copri DSM 18205]
 gi|281405754|gb|EFB36434.1| ATP synthase F1, alpha subunit [Prevotella copri DSM 18205]
          Length = 528

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 92/442 (20%), Positives = 169/442 (38%), Gaps = 37/442 (8%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           QL E        + G + +++     +  L +     + +  +      +  V+ +  D 
Sbjct: 17  QLQEVNGSQQFDEVGTVLTVSDGVARIYGL-RNAEANELLEFENG---TMAIVMNLEEDN 72

Query: 70  VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSME 127
           V    +G    I  G  V    R   I  +  + GRV+N LG+ IDG   +   D   M 
Sbjct: 73  VGCVLLGPTAGIKEGQSVKRTHRIASIRVNDNFLGRVVNPLGQAIDGLGDIDLTDSFEMP 132

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V++  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 133 LDRKAPGVIYRQPVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKS 192

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
                     I   +G++   V   +++         +++V AT+ +   ++  AP    
Sbjct: 193 FYEAGKPVYCIYVAIGQKASTVAALVQNLKEHGALPYTIIVSATAADPAAMQYYAPFAGA 252

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF  +G + L++ D +++ A + RE++           YP  VF    RLLER   
Sbjct: 253 AIGEYFRDRGYSALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAAR 312

Query: 300 SEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
              +                     G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 313 INDQQEVAEQMNDLPECMKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 372

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L  +G  P ++   SVSR+   A     KK+  +L   + ++ E         +   +
Sbjct: 373 TDLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDMAQYRELE---AFSKFSSDM 429

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D +    + +       L Q  
Sbjct: 430 DAVTAMTLDRGRKNDQLLVQPQ 451


>gi|139522712|gb|ABO77771.1| ATP synthase beta subunit [Burmeistera smaragdi]
 gi|139522715|gb|ABO77773.1| ATP synthase beta subunit [Burmeistera succulenta]
          Length = 498

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  G+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTRGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|156530161|gb|ABU75177.1| AtpB [Picrasma excelsa]
          Length = 496

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|113910794|gb|ABI48129.1| ATPase beta subunit [Scapania nemorea]
          Length = 470

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + ++ QG+N+   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVAFSPGKMPNIYNSLIVQGQNAA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRAAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|61968205|gb|AAX57029.1| ATP synthase beta subunit [Andrachne ovalis]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 188/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTAGQQINVICEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|52082862|gb|AAU26012.1| ATPase beta subunit [Piper excelsum]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G+  D +G+ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTVGKQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|14718076|gb|AAK72779.1| ATP synthase beta subunit [Humulus lupulus]
          Length = 496

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 432


>gi|6688901|emb|CAB65316.1| ATP synthase beta subunit [Olea europaea]
 gi|6688960|emb|CAB65348.1| ATP synthase beta subunit [Phyla lanceolata]
          Length = 497

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTIGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085099|gb|AAX62956.1| ATP synthase beta subunit [Austrobuxus megacarpus]
          Length = 482

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+NS   GQ I +  ++        V    
Sbjct: 6   GRIVQIIGPVLDVAFPRGKMPNIYNALVVKGRNST--GQQINVTCEVQQLLGNNRVRTVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPTIVGKEHYETAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|320166885|gb|EFW43784.1| ATP synthase subunit beta [Capsaspora owczarzaki ATCC 30864]
          Length = 544

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/432 (25%), Positives = 193/432 (44%), Gaps = 21/432 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
            V  G +  +      V   ++   + + +  Q   +  + +V   +  + V    +   
Sbjct: 71  SVGSGRVVQVIGAVVDVQFDNELPAILNALEVQRDGARLVLEVAQHLGENTVRTIAMDGT 130

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G L    G    I       GR++N +G+PID    +      + I  + PP + 
Sbjct: 131 EGLTRGQLCLDLGNPIEIPVGPECLGRIMNVIGEPIDERGPIN-AKKKLPIHVEAPPFVE 189

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + 
Sbjct: 190 MSTQQQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAG 249

Query: 195 VGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           VGER RE  +   + +   +        K  +V    +E P  R    LT +T+AEYF  
Sbjct: 250 VGERTREGNDLYHEMIESGVIQLGKPGSKVALVYGQMNEPPGARARVALTGLTVAEYFRD 309

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+
Sbjct: 310 EEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTRKGS 367

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D    
Sbjct: 368 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPRIV 427

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   +  ++  ++  ++  +DI  I G     +      V +   +  FL Q     S
Sbjct: 428 GQEHYDVARAVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKMQRFLSQP---FS 483

Query: 426 SEDVFQEITKKL 437
             +VF     KL
Sbjct: 484 VAEVFTGTPGKL 495


>gi|269794329|ref|YP_003313784.1| ATP synthase F1 subcomplex subunit alpha [Sanguibacter keddieii DSM
           10542]
 gi|269096514|gb|ACZ20950.1| ATP synthase F1 subcomplex alpha subunit [Sanguibacter keddieii DSM
           10542]
          Length = 543

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/447 (21%), Positives = 174/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
             L    + Y    VV  + G +         V  L       + +  +      LG  +
Sbjct: 13  AALDSFVKSYEPESVVTEEVGRVVLAGDGIAQVEGL-PGAMANELLRFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G +V   G    ++    + GRV++ LG PIDG   +   
Sbjct: 69  NLDVRTIGVVILGEFTGIEEGQVVRRTGEVLSVAVGDGYLGRVVDPLGAPIDGLGEIETV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 129 -GRRALELQAPGVMARKSVHEPLQTGLKAIDAMIPIGRGQRQLIIGDRQTGKTAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++     +  D     + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQKENWETGDPSKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYEGKHVLIIFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPVIETKANDVSAYIPTNVISITDGQIFLQSDLFNADQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     KK+  +L   + +F           +   +D      + +
Sbjct: 368 AVDVGISVSRVGGSAQIKAMKKVSGTLKLDLAQFRSLE---AFAMFASDLDPASRAQLAR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   S    ED    I  
Sbjct: 425 GARLLELLKQPQYSPYPIEDQVASIWA 451


>gi|261253523|ref|ZP_05946096.1| ATP synthase alpha chain [Vibrio orientalis CIP 102891]
 gi|260936914|gb|EEX92903.1| ATP synthase alpha chain [Vibrio orientalis CIP 102891]
          Length = 513

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L +   +   V       G I SI     T+  L   V  G+ +      
Sbjct: 1   MQLNSTEISDLIKQRIETFNVSTQARNEGTIVSICDGIITINGLVD-VMQGEMIELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   ++S G  V   GR   +       GRV+N LG+PID
Sbjct: 57  DNRYALALNLERHSVGAVVMGPYADLSEGMTVMGTGRILEVPVGPELLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     +  +    P  ++R+ V+   +TG + +D   P+  GQR  V      GK
Sbjct: 117 GLGQIDAKQYNA-VEIIAPGVIDRKSVDTPIQTGYKAVDSMVPIGRGQRELVIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           + L   ++  + D   K I   +G++   +   +      D LK ++VVVA++ ES  L+
Sbjct: 176 TALAIDAIINQKDSGVKSIYVAIGQKASTIANVVRKLAEHDALKNTIVVVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +             + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNEAYVERLTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTQLFNSGLRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    + +     + + +KQ  
Sbjct: 413 LDDATRRQIDHGERVTELMKQKQ 435


>gi|212896632|gb|ACJ38519.1| membrane-bound ATP synthase subunit B [Bolusafra bituminosa]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   DN+GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|183206552|gb|ACC54474.1| ATP synthase beta subunit [Campanula medium]
          Length = 471

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|193214200|ref|YP_001995399.1| F0F1 ATP synthase subunit beta [Chloroherpeton thalassium ATCC
           35110]
 gi|226740179|sp|B3QUP6|ATPB_CHLT3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|193087677|gb|ACF12952.1| ATP synthase F1, beta subunit [Chloroherpeton thalassium ATCC
           35110]
          Length = 465

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/409 (28%), Positives = 189/409 (46%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ I      V  +  Q   + D ++ +  +   L  V+     +  + V    +   
Sbjct: 4   GKITQIIGPVVDVDFVDGQLPSIMDALIVERPDGTEL--VLETQQHLGEERVRTIAMEAT 61

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V +     +        GR++N +GKPIDG   +     +  I    P    
Sbjct: 62  EGLVRGMKVVNTKNPIQTPVGENVLGRMLNVVGKPIDGLGEVHATK-TYSIHRPSPAFDE 120

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISL 194
                + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         + + 
Sbjct: 121 LSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAG 180

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNV 252
           VGER RE  +  E+      + K+ +V    +E P  R    LTA++IAEYF  +   +V
Sbjct: 181 VGERTREGNDLWEEMKESGVIDKTALVFGQMNEPPGARARVALTALSIAEYFRDEENRDV 240

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     +KG+IT+V +
Sbjct: 241 LLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--VSTKKGSITSVQA 298

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      D   
Sbjct: 299 IYVPADDLTDPAPATTFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIIGRDHYD 358

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              ++  ++ R+++ +DI  I G     D      V +   +  FL Q 
Sbjct: 359 TAQAVKQILQRYKDLQDIIAILGMDELSDED-KLLVARARKVQRFLSQP 406


>gi|61968241|gb|AAX57047.1| ATP synthase beta subunit [Flueggea virosa]
          Length = 479

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDELGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|18075929|emb|CAD11926.1| ATP synthase beta subunit [Escallonia resinosa]
          Length = 467

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 186/419 (44%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL-----GQVIRINLDI-VYICPV 75
            G I+ I      V     +   + + +V +G+++D        +V ++  +  V    +
Sbjct: 12  SGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTDRQPINVTCEVQQLLGNNRVRAVAM 71

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P 
Sbjct: 72  SATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPA 130

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 131 FIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 190

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 191 FGGVGERTREGNDLYMEMKESGVINEQNIGESKVALVYGQMNEPPGARMRVGLTALTMAE 250

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 251 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 308

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 309 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 368

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 PRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6017806|gb|AAF01637.1| ATP synthase beta subunit [Itea ilicifolia]
          Length = 494

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 75  MSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|110915622|gb|ABH02599.1| ATP synthase beta subunit [Desmazeria sicula]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESSATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIKESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|8452718|emb|CAB89961.2| ATP synthase beta subunit [Parnassia palustris]
          Length = 490

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGVPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
               ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 XGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|30265328|ref|NP_847705.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Ames]
 gi|47530867|ref|YP_022216.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188141|ref|YP_031394.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Sterne]
 gi|49481141|ref|YP_039296.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140257|ref|YP_086574.1| F0F1 ATP synthase subunit beta [Bacillus cereus E33L]
 gi|65317282|ref|ZP_00390241.1| COG0055: F0F1-type ATP synthase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118480344|ref|YP_897495.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis str. Al
           Hakam]
 gi|165873338|ref|ZP_02217941.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0488]
 gi|167636395|ref|ZP_02394695.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0442]
 gi|167642060|ref|ZP_02400286.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0193]
 gi|170689704|ref|ZP_02880881.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0465]
 gi|170709426|ref|ZP_02899834.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0389]
 gi|177656024|ref|ZP_02937131.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0174]
 gi|196036290|ref|ZP_03103688.1| ATP synthase F1, beta subunit [Bacillus cereus W]
 gi|196045693|ref|ZP_03112923.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB108]
 gi|225867282|ref|YP_002752660.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB102]
 gi|227818068|ref|YP_002818077.1| ATP synthase F1, beta subunit [Bacillus anthracis str. CDC 684]
 gi|228936590|ref|ZP_04099384.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949026|ref|ZP_04111298.1| ATP synthase subunit beta [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124809|ref|ZP_04253987.1| ATP synthase subunit beta [Bacillus cereus 95/8201]
 gi|229187531|ref|ZP_04314671.1| ATP synthase subunit beta [Bacillus cereus BGSC 6E1]
 gi|229603044|ref|YP_002869520.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0248]
 gi|254686272|ref|ZP_05150131.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. CNEVA-9066]
 gi|254724268|ref|ZP_05186052.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. A1055]
 gi|254735233|ref|ZP_05192942.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744437|ref|ZP_05202117.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Kruger B]
 gi|254755741|ref|ZP_05207774.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Vollum]
 gi|254759526|ref|ZP_05211551.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Australia
           94]
 gi|300117815|ref|ZP_07055582.1| F0F1 ATP synthase subunit beta [Bacillus cereus SJ1]
 gi|81824106|sp|Q630U3|ATPB_BACCZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81828124|sp|Q6HAY0|ATPB_BACHK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81837543|sp|Q81JZ5|ATPB_BACAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201691|sp|A0RL95|ATPB_BACAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808128|sp|C3P1F4|ATPB_BACAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808129|sp|C3LFH9|ATPB_BACAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808130|sp|C1F0M8|ATPB_BACC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|30260006|gb|AAP29191.1| ATP synthase F1, beta subunit [Bacillus anthracis str. Ames]
 gi|47506015|gb|AAT34691.1| ATP synthase F1, beta subunit [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49182068|gb|AAT57444.1| ATP synthase F1, beta subunit [Bacillus anthracis str. Sterne]
 gi|49332697|gb|AAT63343.1| ATP synthase F1, beta subunit [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973726|gb|AAU15276.1| ATP synthase F1, beta subunit [Bacillus cereus E33L]
 gi|118419569|gb|ABK87988.1| ATP synthase F1 subcomplex beta subunit [Bacillus thuringiensis
           str. Al Hakam]
 gi|164710935|gb|EDR16509.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0488]
 gi|167509978|gb|EDR85398.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0193]
 gi|167528229|gb|EDR91011.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0442]
 gi|170125659|gb|EDS94578.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0389]
 gi|170666346|gb|EDT17132.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0465]
 gi|172079879|gb|EDT64988.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0174]
 gi|195991082|gb|EDX55052.1| ATP synthase F1, beta subunit [Bacillus cereus W]
 gi|196023524|gb|EDX62201.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB108]
 gi|225788702|gb|ACO28919.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB102]
 gi|227002506|gb|ACP12249.1| ATP synthase F1, beta subunit [Bacillus anthracis str. CDC 684]
 gi|228595898|gb|EEK53578.1| ATP synthase subunit beta [Bacillus cereus BGSC 6E1]
 gi|228658600|gb|EEL14262.1| ATP synthase subunit beta [Bacillus cereus 95/8201]
 gi|228810599|gb|EEM56948.1| ATP synthase subunit beta [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823025|gb|EEM68863.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229267452|gb|ACQ49089.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0248]
 gi|298724679|gb|EFI65354.1| F0F1 ATP synthase subunit beta [Bacillus cereus SJ1]
          Length = 469

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|183206550|gb|ACC54473.1| ATP synthase beta subunit [Campanula latifolia]
          Length = 475

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 8   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|186886229|gb|ACC93517.1| ATPase F1 alpha subunit [Luzula glabrata]
          Length = 346

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 15/346 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 2   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPIDGKGA 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 62  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 120

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 121 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 180

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 181 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 240

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 241 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 300

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           G  P ++   SVSR+   A     K++  SL   + ++ E      
Sbjct: 301 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQ 346


>gi|196039564|ref|ZP_03106869.1| ATP synthase F1, beta subunit [Bacillus cereus NVH0597-99]
 gi|218906482|ref|YP_002454316.1| ATP synthase F1, beta subunit [Bacillus cereus AH820]
 gi|228917914|ref|ZP_04081450.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930312|ref|ZP_04093316.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229094415|ref|ZP_04225487.1| ATP synthase subunit beta [Bacillus cereus Rock3-42]
 gi|301056772|ref|YP_003794983.1| ATP synthase subunit B [Bacillus anthracis CI]
 gi|226739976|sp|B7JGN0|ATPB_BACC0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|196029724|gb|EDX68326.1| ATP synthase F1, beta subunit [Bacillus cereus NVH0597-99]
 gi|218536432|gb|ACK88830.1| ATP synthase F1, beta subunit [Bacillus cereus AH820]
 gi|228688952|gb|EEL42779.1| ATP synthase subunit beta [Bacillus cereus Rock3-42]
 gi|228829298|gb|EEM74931.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841711|gb|EEM86822.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300378941|gb|ADK07845.1| ATP synthase subunit B [Bacillus cereus biovar anthracis str. CI]
          Length = 469

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|110225680|ref|YP_665685.1| ATP synthase F1 subunit alpha [Mesostigma viride]
 gi|17222551|gb|AAL36724.1|AF353999_4 ATP synthase F1 subunit alpha [Mesostigma viride]
          Length = 519

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/438 (23%), Positives = 182/438 (41%), Gaps = 26/438 (5%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNLGQV 62
           L  L +       N     G +  +      +  +     +G+ V       NSD  G  
Sbjct: 13  LSKLTKKRTKKGTNP-KTYGNVLFVKDGIAQIYGI-LNCRIGEKVRFLTSDSNSDLFGLA 70

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL-- 119
           + I  ++  +  +G    +  G +V   G   ++       GRV++ALG PIDG  +L  
Sbjct: 71  LNIRDEVTDVVILGNPIAVKQGSMVLTMGTSLQVGVGPHMLGRVVDALGTPIDGLGALSG 130

Query: 120 --GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK--- 174
             G      ++ SK P  + RQ V +  +TG++ +D   P+  GQR  +      GK   
Sbjct: 131 QKGTAMPEWDVESKAPGILKRQPVREPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI 190

Query: 175 --STLLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSD 225
               +L+    ++           I   +G++   V + ++        K + +V AT+ 
Sbjct: 191 AIDAILNQKITNEAATSDNQKLFCIYVAIGQKRSTVAQLVKILQKAGAMKYTSIVAATAS 250

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           ++  L+ +AP T  TI EYF   G + L+I D +++ A + R+++      P    +P  
Sbjct: 251 DAAALQFLAPYTGCTIGEYFRENGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 310

Query: 286 VFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      + G+   TA+  +     + +  I  +V SI DG I L   L 
Sbjct: 311 VFYLHSRLLERAAKLSADSGSGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETELF 370

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            +G  P ++   SVSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 371 YKGIRPAINVGLSVSRVGSAAQPKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 427

Query: 404 DKAVHQVPIIYDFLKQSP 421
              +++   + + LKQ+ 
Sbjct: 428 QYLLNRGARLTEVLKQAQ 445


>gi|75332461|sp|Q95AD7|ATPB_PHOTN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943755|emb|CAD10768.1| atp synthase, beta subunit [Phormium tenax]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTASQQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G++IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGRKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 WIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|226698718|sp|P06541|ATPB_CHLRE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
          Length = 481

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/418 (27%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I  I   V   V    Q   + + +  + KNS         +V ++  D  V    + 
Sbjct: 11  GRIVQIIGPVLDIVFAKGQVPNIYNALTIRAKNSAGTEMAVTCEVQQLLGDNCVRAVSMN 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I    P  
Sbjct: 71  PTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 130 VDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 AGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +       S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 WILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 424


>gi|183206524|gb|ACC54460.1| ATP synthase beta subunit [Legousia speculum-veneris]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDALGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTSLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEEKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRVVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|149203131|ref|ZP_01880102.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. TM1035]
 gi|149143677|gb|EDM31713.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. TM1035]
          Length = 444

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 165/432 (38%), Positives = 251/432 (58%), Gaps = 4/432 (0%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINL 67
           A  AE  S  L    G +S++      ++ LS    LGD V  + ++   L G+VIR+  
Sbjct: 3   ALRAELSSLRLSRVIGRVSAVQGNTLRISGLSSEARLGDRVDIRRRSGAPLSGEVIRLEA 62

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
             V + P    E ++LGD V       I+PS  W GR+I+  G P+DG   L +G  +  
Sbjct: 63  ASVMVLPESSPEGVALGDRVILGQAEAIAPSHGWLGRIIDPFGAPLDGR-PLLRGAETRA 121

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           + ++ P    R+ +    +TG+   +   P+  GQR+G+FAGSG+GK+ LL   AR    
Sbjct: 122 LRAEPPAPARRRALGARLETGMAAFNTVLPIVRGQRVGLFAGSGVGKTMLLGHLARHMQA 181

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D V+I+L+GERGRE+REF+E  LG + ++++V+V ATSD SP++R+    TA+ +AE+F 
Sbjct: 182 DVVVIALIGERGRELREFVEHVLGPEGMRRAVIVAATSDRSPLVRRRCAWTAMAVAEFFR 241

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G  VL + DSITRFA + RE+AT +GE+P  RG+P S    +  L ER GP E   G+
Sbjct: 242 DQGQQVLFLADSITRFAEAHREVATAAGEMPALRGFPASTSHLIMSLCERAGPGEDGAGD 301

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           ITA+++VLV G +  +PIAD +R +LDGH+VL+R +AE GRYP +D L SVSR   +A +
Sbjct: 302 ITALLTVLVAGSDMEEPIADILRGVLDGHVVLDRQIAERGRYPAIDLLRSVSRSLPRAAT 361

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +E  L+S    L+  +  +  +   G Y  G D  LD+A+   P +  FL      +S+
Sbjct: 362 DEENTLISRTRSLLGNYARSETMIKAGLYAEGSDPELDQAIRIWPELDGFLA-EKEAVSA 420

Query: 427 EDVFQEITKKLQ 438
           ++ F  +   L+
Sbjct: 421 KNSFARLGVILR 432


>gi|109946732|ref|YP_663960.1| flagellum-specific ATP synthase [Helicobacter acinonychis str.
           Sheeba]
 gi|109713953|emb|CAJ98961.1| flagellum-specific ATP synthase [Helicobacter acinonychis str.
           Sheeba]
          Length = 434

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 233/423 (55%), Gaps = 9/423 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+ +  +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYANGFNPSV--GDVVKIEKSDGTECVGMVVVVEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGHNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLVPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLQGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E  KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEEG-KGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
              L    +E   +  IG Y+ G D  LD+A+++  ++  FL Q  + L     F++  K
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAINKKALMEQFLVQDENALQ---PFEQSAK 427

Query: 436 KLQ 438
           +L+
Sbjct: 428 QLE 430


>gi|20269438|gb|AAM17946.1| ATP synthase beta subunit [Shortia exappendiculata]
          Length = 490

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      VT    +   + + +V Q  + D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVTFPPGKMPNIYNALVVQ--SRDTVGQPINVTCEVQQLLGXNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRXAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G   RE     ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGTDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPWILGEEHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQP 434


>gi|14717997|gb|AAK72740.1| ATP synthase beta subunit [Celosia argentea]
          Length = 483

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTTGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|323715456|gb|ADY04796.1| ATP synthase beta subunit [Hydrostachys goudotiana]
          Length = 493

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTXGQPINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINENNISESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 429


>gi|305671645|gb|ADM63132.1| ATP synthase beta subunit [Weigela hortensis]
          Length = 489

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGDKHYQTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|257852978|gb|ACV71500.1| ATP synthase beta subunit [Fusispermum laxiflorum]
          Length = 497

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVDFPPGKMPNIYNALVIKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRFAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|156530083|gb|ABU75138.1| AtpB [Melia azedarach]
          Length = 492

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLTRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|119350485|gb|ABL63193.1| AtpB [Elakatothrix viridis]
          Length = 392

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 5   VRAVAMNPTEGLMRGMEVLDTGKPLSVPVGKITLGRIFNVLGEPVDNLGPVETKE-KLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + PP ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRQAPPFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSESKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       S+   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYDCAQSVKRTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|63091881|emb|CAH58791.1| ATP synthase alpha chain [Enterococcus italicus]
 gi|63091985|emb|CAH58850.1| ATP synthase alpha chain [Enterococcus italicus]
          Length = 367

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 155/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + + I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDIGIIILGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGEI-KTDKTRPVEAAAPGVMQRKSVHEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDAIINQKGQDMICIYVAIGQKDSTVRTQVETLRK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              L  ++VV A + +   +  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGALDYTIVVSAGASQPAPMLYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  F E   
Sbjct: 296 ISITDGQIFLESDLFYSGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASFRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|75338439|sp|Q9TMU1|ATPB_CONMJ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5758865|gb|AAD50839.1| ATP synthase beta subunit [Convallaria majalis]
          Length = 495

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSGP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|25808469|gb|AAN74361.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 356

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 10/354 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 7   GVAANLEEDSVGVIVFGFGNNIKEGIGVKRTKNLMKVPVGDAVVGRVLNALGEPIDGKGE 66

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 67  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 125

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 126 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 185

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 186 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 245

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 246 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 305

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
             SVSR+   A     K++  +L   + ++ E +       +   +D    K +
Sbjct: 306 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQ---AFTQFASDLDEASKKQL 356


>gi|283471320|emb|CAQ50531.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 470

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTLQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|259487710|tpe|CBF86592.1| TPA: ATP synthase beta chain, mitochondrial (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 518

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/431 (25%), Positives = 185/431 (42%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
             GG I  +      V    + +  + + +  +      + +V   +  ++V    +   
Sbjct: 46  AAGGKIHQVIGAVVDVKFEGEKLPAILNAIETENNGQKLVLEVSQHLGENVVRTIAMDGT 105

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G      G    I       GR++N  G PID    + K      I ++ P    
Sbjct: 106 EGLTRGAPARDTGAPITIPVGPGTLGRIVNVTGDPIDERGPI-KATKYAPIHAEAPEFTE 164

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   
Sbjct: 165 QSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG 224

Query: 195 VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           VGER RE  +   +         D   K  +V    +E P  R    LT +TIAEYF  +
Sbjct: 225 VGERTREGNDLYHEMQETGVIQLDGESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDE 284

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +   KG+I
Sbjct: 285 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSI 342

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     
Sbjct: 343 TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVG 402

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +     + +  ++  ++  +DI  I G     +      V +   +  FL Q     + 
Sbjct: 403 EEHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLERFLSQP---FTV 458

Query: 427 EDVFQEITKKL 437
             VF  I  KL
Sbjct: 459 AQVFTGIEGKL 469


>gi|155029297|dbj|BAF75529.1| ATP synthase beta subunit [Discoglypremna caloneura]
          Length = 489

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|115564945|emb|CAJ70600.1| ATP synthase beta subunit [Tiarella cordifolia]
          Length = 445

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLRRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|22094585|gb|AAM91922.1|AF525277_1 ATPase beta subunit [Populus tomentosa]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D + Q I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 79  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMSVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|52220817|ref|YP_086973.1| ATP synthase CF1 beta subunit [Panax ginseng]
 gi|75322810|sp|Q68RZ9|ATPB_PANGI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|51235320|gb|AAT98516.1| ATPase beta subunit [Panax ginseng]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KDRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER R   +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTRGGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62902827|gb|AAY19328.1| ATP synthase beta subunit [Parnassia tenella]
          Length = 478

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 2   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGVPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|62902819|gb|AAY19324.1| ATP synthase beta subunit [Parnassia faberi]
          Length = 488

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLTRGMEVIDTGVPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|108796774|ref|YP_636388.1| CF1 beta subunit of ATP synthase [Staurastrum punctulatum]
 gi|118573758|sp|Q32RY8|ATPB_STAPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|61393542|gb|AAX45683.1| CF1 beta subunit of ATP synthase [Staurastrum punctulatum]
          Length = 493

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/426 (26%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S       G I+ I         L  Q   + + ++ +G+N      +   +V ++  D 
Sbjct: 11  STVTTKNVGRITQIIGPVLDAAFLPGQMPNIYNAIIVKGQNPAGQEINVTCEVQQLLGDN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + ++ G  VF  G    +       GR+ N LG+P+D    +    ++  
Sbjct: 71  RVRAVAMSATDGLTRGMEVFDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVNAT-ITSV 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 190 AHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGL 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGGLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGAEHYETAQGVKKTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|323715420|gb|ADY04778.1| ATP synthase beta subunit [Alangium kurzii]
 gi|323715422|gb|ADY04779.1| ATP synthase beta subunit [Alangium chinense]
 gi|323715424|gb|ADY04780.1| ATP synthase beta subunit [Alangium salviifolium]
          Length = 483

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|302334941|ref|YP_003800148.1| ATP synthase F1 subcomplex alpha subunit [Olsenella uli DSM 7084]
 gi|301318781|gb|ADK67268.1| ATP synthase F1 subcomplex alpha subunit [Olsenella uli DSM 7084]
          Length = 551

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 183/440 (41%), Gaps = 31/440 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDN 58
           +++ L  +    +D   ++      ++ +      V+ L +    G+ +     G     
Sbjct: 14  LRERLAQVNATVDDQEASV------VTEVGDGIAHVSGL-KTAMAGELLEFTSSGSGRSV 66

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G    +++D V     G  + +  GD     GR   I       GRV+N LG+P+DG  
Sbjct: 67  FGLAQNLDVDEVGAVLFGEVDAVKEGDECRTTGRVMDIPVGNAMLGRVVNPLGQPVDGLG 126

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           ++   D    I  K P  M RQ V +  +TG+  ID   P+  GQR  +      GK+ +
Sbjct: 127 AID-TDARRPIEFKAPGIMERQPVCEPVQTGLIAIDAMVPIGRGQRELIIGDRKTGKTAI 185

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
              ++  + D     I   +G++   V    E +    +  K+++V AT+ +S  ++ +A
Sbjct: 186 AIDAIVNQRDTDMICIYVAIGQKASTVAAIKETFARQGVLDKTIIVAATAADSAPMQYIA 245

Query: 235 PLTAVTIAEYFS------------SKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           P+    I EYF               G +VL++ D +++ A + R+++      P    Y
Sbjct: 246 PMAGAAIGEYFMYNDESGNPADRDHPGRHVLVVYDDLSKQAVAYRQMSLTLHRPPGREAY 305

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  +F    RLLER          G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 306 PGDIFYLHSRLLERACKMSDANGGGSLTALPIIETQEGDVSAYIPTNVISITDGQIYLQS 365

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L  +G+ P VD   SVSR+   A     K++  +L   +  + E +       +   +D
Sbjct: 366 NLFFQGQRPAVDVGISVSRVGGAAQIKAMKQVAGTLRLDLASYREKQ---AFAQFGSDLD 422

Query: 401 LILDKAVHQVPIIYDFLKQS 420
                 ++    + + LKQ 
Sbjct: 423 ATTQYQLNHGAHMMEMLKQG 442


>gi|183206656|gb|ACC54526.1| ATP synthase beta subunit [Petromarula pinnata]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFTPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|194267335|gb|ACF35654.1| ATP synthase beta subunit [Lambertia formosa]
          Length = 494

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+ ++ + +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 56  GQQTNVICEVQQLLGNNRVRAVAMSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLG 115

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 116 EPVDNLGPV-ATRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 174

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +  ++               K  +
Sbjct: 175 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVAL 234

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 235 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 294

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 295 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 352

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 353 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDE 412

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +     AV +   I  FL Q 
Sbjct: 413 LSEED-RLAVARARKIERFLSQP 434


>gi|119368024|dbj|BAF40515.1| ATP synthase beta subunit [Scagea oligostemon]
          Length = 489

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/423 (26%), Positives = 186/423 (43%), Gaps = 29/423 (6%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
              G I  I      V     +   + + +V +G   D+ GQ I +  ++        V 
Sbjct: 10  TNRGRIVQIIGPVLDVAFPRGKMPNIYNALVVKG--RDSTGQQINVTCEVQQLLGNNRVR 67

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 68  TVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHR 126

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +      + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +  
Sbjct: 127 SAPAFIQLDTKLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHG 186

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+
Sbjct: 187 GVSVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTAL 246

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 247 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 305

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 306 -TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTS 364

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +   S+   + R++E +DI  I G     +      V +   I  FL
Sbjct: 365 TMLQSNIVGKEHYETAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 423

Query: 418 KQS 420
            Q 
Sbjct: 424 SQP 426


>gi|61968209|gb|AAX57031.1| ATP synthase beta subunit [Apodiscus chevalieri]
          Length = 479

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|7708333|emb|CAB90092.1| ATP synthase beta subunit [Humiria balsamifera]
          Length = 475

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|4063532|gb|AAC98324.1| ATP synthase beta subunit [Brownlowia elata]
          Length = 456

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 102/388 (26%), Positives = 165/388 (42%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +     +  G  V   G    +       GR+
Sbjct: 25  GQDXXGQPINVTCEVQQLLGNXRVRAVAMSATVGLMRGMEVIDTGAPLSVPVGGATLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE---FIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G  G   RE      +              
Sbjct: 144 LFGGAGVGKTVLIMELINTIAKAHGCVSVFGGVGERTREGNDLYXEMXESGVINEQNLAE 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    L+A+T+AEYF       V L +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNEQXVXLFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 322 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKIERFLSQP 408


>gi|183206592|gb|ACC54494.1| ATP synthase beta subunit [Microcodon glomeratum]
          Length = 486

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 115/423 (27%), Positives = 188/423 (44%), Gaps = 29/423 (6%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
           V+ G I  I      V     +   + + +V +G   D LGQ I +  ++        V 
Sbjct: 6   VKPGRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVR 63

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+PID    +     +  I  
Sbjct: 64  AVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHR 122

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 123 SAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 182

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+
Sbjct: 183 GVSVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTAL 242

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 243 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 302 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 360

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +      + +  +   S+   + R++E +DI  I G     +      V +   +  FL
Sbjct: 361 TMLQPRIVSHEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKMERFL 419

Query: 418 KQS 420
            Q 
Sbjct: 420 SQP 422


>gi|218887916|ref|YP_002437237.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226740189|sp|B8DRD2|ATPB_DESVM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218758870|gb|ACL09769.1| ATP synthase F1, beta subunit [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 471

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/415 (26%), Positives = 191/415 (46%), Gaps = 17/415 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSD---NLGQV-IRINLDIVYI 72
           +    G I  +      V   S  +   L    +    NSD    + +V   +  ++V  
Sbjct: 1   MSANIGKIVQVIGAVVDVEFPSGNLPNILSALDIKNPNNSDAPQLVCEVAQHLGDNVVRT 60

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G      G+   +       GR++N +G+P+D    + K D  + I   
Sbjct: 61  IAMDATEGLVRGMEAVDTGKPIMVPVGKASLGRIMNVVGRPVDEMGPI-KTDKYLPIHRP 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P    +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +       
Sbjct: 120 APEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGG 179

Query: 191 --IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  +   +     + +K+ ++    +E P  R    LTA+  AEYF  
Sbjct: 180 ISVFAGVGERTREGNDLYHEMKDAGVLEKAALIYGQMNEPPGARARVALTALACAEYFRD 239

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+
Sbjct: 240 IENQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERI--TSTVKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++  ++ ++++ +DI  I G     D      V +   I  FL Q 
Sbjct: 358 GPEHYSVARAVQQVLQKYKDLQDIIAILGMDELSDED-KLTVARARRIQRFLSQP 411


>gi|61968333|gb|AAX57093.1| ATP synthase beta subunit [Putranjiva zeylanica]
          Length = 478

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V + +N   +GQ I +  ++        V    
Sbjct: 9   GRITQIIGPVLDVAFPPGKMPNIYNALVVKSQN--TVGQQINVTCEVQQLLGNNRVRTVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHKSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINGENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPKIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|34500026|gb|AAQ73595.1| ATP synthase beta subunit [Actinobacillus rossii]
          Length = 445

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +        Q  ++   +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKIYDALKVEDAGLTLEVQ-QQLGGGVVRCIALGTSD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR++N LG+PID    +G  + +  I    P    +
Sbjct: 60  GLKRGLKVNNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEE-NWAIHRAAPSYEEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 179 GERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 402


>gi|74139650|dbj|BAE40961.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFGEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|183206594|gb|ACC54495.1| ATP synthase beta subunit [Wahlenbergia hederacea]
          Length = 467

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQKFS 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   +  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKMERFLSQP 413


>gi|197132374|gb|ACH47705.1| ATP synthase CF1 beta subunit [Geranium carolinianum]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V  GK  D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDIVFPKGKMPYIYNALVVTGK--DTIGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +   +++  I    P
Sbjct: 79  MSATDGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TEITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 DFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 A+  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGAEHYEIAQRVKETLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|152990964|ref|YP_001356686.1| F0F1 ATP synthase subunit beta [Nitratiruptor sp. SB155-2]
 gi|166201722|sp|A6Q4C0|ATPB_NITSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151422825|dbj|BAF70329.1| F0F1-type ATP synthase, beta subunit [Nitratiruptor sp. SB155-2]
          Length = 469

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 191/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-VIR----INLDIVYICPVGIG 78
           G I  +      V        + + +  + +  D   + V+     +  + V    + + 
Sbjct: 6   GKIIQVMGPVVDVDFEDYLPAINEALEMELEVEDKKIRLVLEVAAHLGDNRVRTIAMDMT 65

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G   ++       GR+ N +G  ID  + L +      I    PP   
Sbjct: 66  DGLVRGMEVKATGDSIKVPVGEEVLGRIFNVIGDTIDEGEPL-QAKTYWSIHRSAPPFEE 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +   E+ F+TGI+V+D+  P   G + G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKEEIFETGIKVVDLLAPYKKGGKTGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYYEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A +  E++   G +P A GY  ++ SE+ RL ERI  +  +KG+IT++ +
Sbjct: 245 LMFIDNIFRYAQAGAEMSALLGRIPSAVGYQPTLASEMGRLQERI--TSTKKGSITSIQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      +  K
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRRIAEKGIYPAVDPLDSTSRMLDPNIVGEEHYK 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 363 VARGVQAVLQKYKDLQDIIAILGMDELSEED-KLTVERARKIERFLSQP 410


>gi|124361742|gb|ABN09313.1| ATP synthase beta subunit [Diospyros tetrandra]
          Length = 453

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V+     +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVSFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|283046836|ref|NP_001164361.1| ATP synthase subunit beta, mitochondrial [Tribolium castaneum]
 gi|270009266|gb|EFA05714.1| hypothetical protein TcasGA2_TC015322 [Tribolium castaneum]
          Length = 518

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 193/430 (44%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G + ++      V        + + +  Q ++   + +V   +  + V    +   E 
Sbjct: 49  PNGKVVAVIGAVVDVQFDDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEG 108

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   RI   A   GR+IN +G+PID    +   D    I ++ P  +   
Sbjct: 109 LVRGQAVSDTGYPIRIPVGAETLGRIINVIGEPIDERGPV-PTDKLAPIHAEAPEFVEMS 167

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 168 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 227

Query: 197 ERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  + 
Sbjct: 228 ERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQE 287

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT
Sbjct: 288 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSIT 345

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      
Sbjct: 346 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQ 405

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q        
Sbjct: 406 EHYNVARGVQKILQDYKSLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP---FQVA 461

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 462 EVFTGHAGKL 471


>gi|7708680|emb|CAB90013.1| ATP synthase beta subunit [Tofieldia calyculata]
          Length = 490

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 15  GRIXQIXGPVLDVAFPXGKMPNIYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 74

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 75  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 134 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 193

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 194 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 253

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 254 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 311

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 312 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 371

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|62085147|gb|AAX62979.1| ATP synthase beta subunit [Hybanthus sp. Alford 89]
          Length = 485

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|283786637|ref|YP_003366502.1| T3SS translocator EscN [Citrobacter rodentium ICC168]
 gi|282950091|emb|CBG89725.1| T3SS translocator EscN [Citrobacter rodentium ICC168]
          Length = 446

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 157/406 (38%), Positives = 226/406 (55%), Gaps = 7/406 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I++I               +G F  ++ +    L +VI IN D V++ P      +  
Sbjct: 36  GKITNIGGTIIKARL--PNARIGAF--YKIEPGQRLAEVIAINGDEVFLLPFEHVSGMYC 91

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  + + G  F+I       GR+++ +G+P+  + +         + ++ P  + RQ ++
Sbjct: 92  GQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNIATLYLPFKRSLYAEPPDPLLRQVID 151

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           + F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERGREV
Sbjct: 152 QPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERGREV 211

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+TR+
Sbjct: 212 NEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSVTRY 271

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN ND
Sbjct: 272 ARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDNVND 329

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PI D VRSILDGHIVL R LAEE  +P +D   S SR+      ++  +  +    LI  
Sbjct: 330 PIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKLIAT 389

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++    +  IG Y  G D   DKA+     I  FL+QS  D+SS +
Sbjct: 390 YKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFLQQSTKDISSYE 435


>gi|186886307|gb|ACC93556.1| ATPase F1 alpha subunit [Juncus imbricatus]
          Length = 343

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 15/341 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 120 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 179

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 180 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGEVF 239

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 240 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 299

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           G  P ++   SVSR+   A     K++  SL   + ++ E 
Sbjct: 300 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREV 340


>gi|153940743|ref|YP_001389519.1| F0F1 ATP synthase subunit beta [Clostridium botulinum F str.
           Langeland]
 gi|170756277|ref|YP_001779784.1| F0F1 ATP synthase subunit beta [Clostridium botulinum B1 str. Okra]
 gi|190358657|sp|B1IE34|ATPB_CLOBK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358658|sp|A7G9Q9|ATPB_CLOBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|152936639|gb|ABS42137.1| ATP synthase F1, beta subunit [Clostridium botulinum F str.
           Langeland]
 gi|169121489|gb|ACA45325.1| ATP synthase F1, beta subunit [Clostridium botulinum B1 str. Okra]
 gi|295317619|gb|ADF97996.1| ATP synthase F1, beta subunit [Clostridium botulinum F str. 230613]
          Length = 463

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
           +     +   + +V   I  D +    +   E +  G      G+   +       GR+ 
Sbjct: 31  LEINAGDRKVIAEVEQHIGDDTIRAIAMEDTEGLKRGMEALDTGKSVSVPVGKEVLGRLF 90

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LGKPIDG       + S  I    P    +    + F+TGI+VID+  P   G +IG+
Sbjct: 91  NVLGKPIDGAGEF-TSEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGL 149

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+ L+     +   +     + + VGER RE  +   +     + +K+ +V  
Sbjct: 150 FGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEKTALVFG 209

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 210 QMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 269

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+R++
Sbjct: 270 QPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAI 327

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E G YP VDPL S SR+ D      +  ++   + +++ R+ E +DI  I G     + 
Sbjct: 328 TELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAILGIDELSEE 387

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 388 D-KLVVGRARKIQRFLSQP 405


>gi|160896090|ref|YP_001561672.1| flagellar protein export ATPase FliI [Delftia acidovorans SPH-1]
 gi|160361674|gb|ABX33287.1| flagellar protein export ATPase FliI [Delftia acidovorans SPH-1]
          Length = 480

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 240/429 (55%), Gaps = 28/429 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEIS 82
           G ++ +T +    T L   V +G     + +  D  L +V+    +  ++ P G  + +S
Sbjct: 43  GTLTRLTGLVLEATGL--QVPVGSQCWIRQQGQDPVLAEVVGFAGERAFLMPAGDIQGLS 100

Query: 83  LGDLVFHW---------------------GRFRISPSACWCGRVINALGKPIDGDDSLGK 121
            G +V                        G  R+   +   GRV+++ G+P+D    L  
Sbjct: 101 SGAIVTPAEPFVAPLRFGDGVEPPVSLAAGVLRLPIGSGLLGRVVDSQGQPLDHGGPL-- 158

Query: 122 GDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            D+S +++ + P  AM+R  V +   TG+R ++    +  GQR+G+FAGSG+GKS LL M
Sbjct: 159 ADVSADLLDRNPINAMDRDPVRETLDTGVRSLNALLTVGRGQRLGLFAGSGVGKSVLLGM 218

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAV 239
            AR    D +++ L+GERGREV+EF+ED LG  +  ++VVV A +D  P+LR      A 
Sbjct: 219 MARYTQADVIVVGLIGERGREVKEFVEDILGAQDRSRAVVVAAPADAPPLLRMQGAAYAT 278

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            IAE+F  KG +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP L+ER G 
Sbjct: 279 AIAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSGN 338

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
                G+ITA  +VL +GD+  DPIAD+ R+ILDGH+VL+R+LAE G YP +D   S SR
Sbjct: 339 GLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHVVLSRALAESGHYPAIDIEQSASR 398

Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           +     S +  +L      +  R+++ RD+  +G Y  G D  +D+A+   P +  FL+Q
Sbjct: 399 VMHNVVSREHFELARRFRAVYSRYQKGRDLVQVGAYMAGSDPQMDEAIRLQPAMAAFLQQ 458

Query: 420 SPSDLSSED 428
           S  + +S D
Sbjct: 459 SMFESASMD 467


>gi|113910816|gb|ABI48140.1| ATPase beta subunit [Lejeunea cavifolia]
          Length = 455

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 19  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGAPLSVPVGEATLGRIFNVLG 78

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 79  EPVDNLGPV-EASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 137

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 138 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESKVINEENISDSKVAL 197

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 198 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 257

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 258 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 315

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 316 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 375

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 376 LSEED-RLTVARARKIERFLSQP 397


>gi|110227086|ref|YP_665565.1| ATP synthase beta subunit [Populus alba]
 gi|118573717|sp|Q14FF0|ATPB_POPAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|109945524|dbj|BAE97212.1| ATP synthase beta subunit [Populus alba]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D + Q I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|61968221|gb|AAX57037.1| ATP synthase beta subunit [Blotia leandriana]
          Length = 479

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|118573507|sp|Q85V24|ATPB_BARSC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351935|emb|CAD48415.1| ATP synthase beta subunit [Scilla scilloides]
          Length = 495

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I         +  + V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVICEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVLDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20146564|gb|AAM12436.1| ATP synthase alpha subunit [Diospyros digyna]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 19/362 (5%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V I   G    I  GDLV   G     P      GRV++ALG PIDG  SL   +    
Sbjct: 1   NVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRR 59

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +   
Sbjct: 60  VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQ 119

Query: 188 D-----------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++    G+ L+ S++V AT  +   L+ +AP
Sbjct: 120 MNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATPSDPAPLQFLAP 179

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 180 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 239

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 240 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 299

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  SL   + ++ E   +  +  +   +D      +++   +
Sbjct: 300 GLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAALAQFGSDLDAATQALLNKGAXL 356

Query: 414 YD 415
            +
Sbjct: 357 TE 358


>gi|6467948|gb|AAF13247.1|AF197614_1 ATPase beta subunit [Cocculus trilobus]
          Length = 491

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 18  GRITQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|28261724|ref|NP_783239.1| ATP synthase CF1 beta subunit [Atropa belladonna]
 gi|50400576|sp|Q8S8W8|ATPB_ATRBE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|20068338|emb|CAC88051.1| ATPase beta subunit [Atropa belladonna]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 79  MSATDGLTRGMEVIDKGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTMS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|260590647|ref|ZP_05856105.1| ATP synthase F1, alpha subunit [Prevotella veroralis F0319]
 gi|260537388|gb|EEX20005.1| ATP synthase F1, alpha subunit [Prevotella veroralis F0319]
          Length = 527

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 91/430 (21%), Positives = 166/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTVGDGVARVYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCILLGPTTGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +   D   M +  K P  + RQ
Sbjct: 85  KEGQSVKRTHRIASIRVNDNFLGRVVNPLGEAIDGKGDIDLTDSFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDTILNQKSFYEQGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   +++         ++VV AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVATLVQNLKERGALPYTIVVSATAADPAAMQYYAPFAGAAIGEYFRDRGYS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINDQQEIAEQMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L  +L  +G  P +
Sbjct: 325 DLPECMKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESNLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQVKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDQVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|229199429|ref|ZP_04326092.1| ATP synthase subunit beta [Bacillus cereus m1293]
 gi|228584005|gb|EEK42160.1| ATP synthase subunit beta [Bacillus cereus m1293]
 gi|324329253|gb|ADY24513.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 468

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 48  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVP 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 SDVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 346 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|183206546|gb|ACC54471.1| ATP synthase beta subunit [Campanula alliariifolia]
          Length = 487

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   DNLGQ I +  ++        V    
Sbjct: 10  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDNLGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGTPLSVPVGGSTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|111283718|gb|ABH09209.1| ATPase beta subunit [Temnoma pulchellum]
          Length = 449

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVMDTGAPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPIDTS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|91776327|ref|YP_546083.1| ATPase FliI/YscN [Methylobacillus flagellatus KT]
 gi|91710314|gb|ABE50242.1| ATPase FliI/YscN [Methylobacillus flagellatus KT]
          Length = 472

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 154/428 (35%), Positives = 232/428 (54%), Gaps = 26/428 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
             G I+ +T +      +   + +G    V   +      +V+  +   + + P    E 
Sbjct: 30  VSGRITKLTGLVMEAVGI--KLPIGSACYVPLAEGRRVEAEVVGFDGGRMLLMPQSGVEG 87

Query: 81  ISLGDLVFHWG--------------------RFR-ISPSACWCGRVINALGKPIDGDDSL 119
           +  G  VF                       R R +       GRVI+A G+P+D    L
Sbjct: 88  VVPGAKVFALEVADALPKPNQAKHPRRRAIDRARHLPVGEALLGRVIDAAGRPLDELGPL 147

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + S+ + ++    ++R  +E+    G+R I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 148 N-SEHSVPLNTRPLNPLSRAPIEEVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVLLG 206

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    + +++ L+GERGREV+EFIE  LG + L ++VVV A +D   ++R      A
Sbjct: 207 MMARYTTAEVIVVGLIGERGREVKEFIEQILGPEGLARAVVVAAPADVPALMRLQGASYA 266

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF ++G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G
Sbjct: 267 TAIAEYFRNQGKDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAG 326

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP +D   S+S
Sbjct: 327 NGKPGEGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEQSIS 386

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R      S + +K    L  L  R+   +D+  +G Y  G D +LD+A+ +   I  FL+
Sbjct: 387 RAMHNITSPEHQKNARKLKQLNSRYTRNQDLINVGAYESGSDPVLDEAIMRHEAIEAFLQ 446

Query: 419 QSPSDLSS 426
           Q   + +S
Sbjct: 447 QDIKESAS 454


>gi|7708260|emb|CAB90054.1| ATP synthase beta subunit [Cobaea scandens]
          Length = 484

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRVIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTTSPIHKSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 424


>gi|32815635|gb|AAP88214.1| ATP synthase beta subunit [Corylus avellana]
          Length = 457

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|62085212|gb|AAX63009.1| ATP synthase beta subunit [Celastrus scandens]
          Length = 482

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      VT    +   + + +  +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVTFSPGKMPNIYNALAVKGRDTSGHAINLICEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATEGLMRGMSVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|330812434|ref|YP_004356896.1| type III secretion protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380542|gb|AEA71892.1| putative type III secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 452

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 153/436 (35%), Positives = 233/436 (53%), Gaps = 14/436 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLD 68
           QLA       V+  G +  ++ +     C      +GD    +    +  L +++  +  
Sbjct: 16  QLAHLRRFAPVMVRGRVQRVSGILLQ--CRLPGAQIGDLCRVERDTREPLLAEIVGFDQH 73

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI-DGDDSLGKGDL-- 124
              +  +G  E I +G  V   G   R+       G+V++  G+P+ DG      G    
Sbjct: 74  DALLSALGGLEGIRVGAAVEPLGMPHRVCVGPELLGQVLDGFGRPLLDGGTGAFAGPHVL 133

Query: 125 -SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            + E++ + P    R R+++   TG+R ID    L  GQR+G+FAG+G GK+TLL+  AR
Sbjct: 134 HASEVIGEAPAPTARPRIQRPLMTGVRAIDGPLTLGEGQRVGLFAGAGCGKTTLLAEIAR 193

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   D ++  L+GERGRE+REF+  +   +   ++V+V ATSD S + R  A  TA  +A
Sbjct: 194 NVDCDVIVFGLIGERGRELREFLDHELDDELRARAVLVCATSDRSSMERARAAFTATALA 253

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E F ++G  VLL++DS+TRFA + REI   +GE     G P SV+  LPRL+ER G + +
Sbjct: 254 EGFRARGQRVLLLIDSLTRFARAQREIGLAAGEPLGRGGLPPSVYGLLPRLVERAGLTNE 313

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G ITA  +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D LAS+SR   
Sbjct: 314 --GAITAFYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVLASLSRTLA 371

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
               A+  +   +L  L+  +E+   +  +G Y+ G D + D AV     +  FL+Q   
Sbjct: 372 NVAEAEHLRAGINLRRLLSAYEQIELMLRLGEYQAGADPLTDLAVESRGALDAFLRQ--- 428

Query: 423 DLSSEDVFQEITKKLQ 438
           DL   + F      LQ
Sbjct: 429 DLREPEPFASTLAHLQ 444


>gi|302901641|ref|XP_003048480.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729413|gb|EEU42767.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 514

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/441 (25%), Positives = 189/441 (42%), Gaps = 21/441 (4%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLS-QYVCLGDFVVHQGKNSDNLGQV-IRINLD 68
           ++  ++    V  G I  +      V     +   + + +  Q      + +V   +  +
Sbjct: 32  ISSRWASTASVGSGKIHQVIGAVVDVKFDGAKLPAILNSLETQNNGQKLVLEVSQHLGEN 91

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           +V    +   E +  G      G    I       GR++N  G PID    + K D  + 
Sbjct: 92  VVRCIAMDGTEGLVRGAPAVDTGAPITIPVGPQTLGRIMNVTGDPIDERGPI-KSDKRLP 150

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  + P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 151 IHQEAPEFVEQSTSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 210

Query: 188 DKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTA 238
                S+   VGER RE  +   +         D   K  +V    +E P  R    LT 
Sbjct: 211 AHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGARARVALTG 270

Query: 239 VTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI
Sbjct: 271 LTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI 330

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S 
Sbjct: 331 --TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSK 388

Query: 358 SRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+ D      D     + +  ++  ++  +DI  I G     +      V +   I  F
Sbjct: 389 SRMLDPRVVGQDHYDTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRF 447

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L Q     +   VF  I   L
Sbjct: 448 LSQP---FTVAQVFTGIEGAL 465


>gi|261823738|ref|YP_003261844.1| F0F1 ATP synthase subunit beta [Pectobacterium wasabiae WPP163]
 gi|261607751|gb|ACX90237.1| ATP synthase F1, beta subunit [Pectobacterium wasabiae WPP163]
          Length = 460

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   IV    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVENGAEKLVLEVQQQLGGGIVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLNVNNLDHPIEVPVGKATLGRIMNVLGDPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|110915652|gb|ABH02614.1| ATP synthase beta subunit [Helictotrichon convolutum]
 gi|110915654|gb|ABH02615.1| ATP synthase beta subunit [Helictotrichon mortonianum]
          Length = 490

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 177/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSD----NLGQVIRINLDI-VYICP 74
             G I  I      VT     +       VV     SD       +V ++  +  V    
Sbjct: 11  SAGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTSDKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|42559064|gb|AAS20218.1| ATP synthase beta subunit [Wurmbea pygmaea]
          Length = 489

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFSPGRMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNITDSKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|91983089|gb|ABE68641.1| ATP synthase subunit B [Turpinia paniculata]
          Length = 474

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 414


>gi|7687980|emb|CAB89710.1| ATP synthase beta subunit [Gyrocarpus americanus]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLEVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6687664|emb|CAB65053.1| ATP synthase beta subunit [Halesia diptera]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDIGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6689006|emb|CAB65350.1| ATP synthase beta subunit [Phyllonoma laticuspis]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVTFRPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPXSVPVGGATLGRIFNVLGEPVDNLGPVDTXTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 434


>gi|5758898|gb|AAD50872.1| ATP synthase beta subunit [Monocostus uniflorus]
          Length = 496

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    L     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPLDTSTTS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|11466709|ref|NP_039305.1| ATP synthase CF1 beta subunit [Marchantia polymorpha]
 gi|114552|sp|P06284|ATPB_MARPO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11679|emb|CAA28091.1| atpB [Marchantia polymorpha]
          Length = 492

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 187/433 (43%), Gaps = 29/433 (6%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI 69
           LA   S  +    G I+ +      V     +   + + ++ + +NS   G+ I +  ++
Sbjct: 6   LAFGMSTLVAKNIGSITQVIGPVLDVAFSPGKMPNIYNSLIVKDQNSA--GEEINVTCEV 63

Query: 70  --------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
                   V    +   + +  G  V   G    +       GR+ N LG+P+D    + 
Sbjct: 64  QQLLGNNKVRAVAMSATDGMMRGMKVIDTGAPLTVPVGEATLGRIFNVLGEPVDNLGPV- 122

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +   +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 123 EVTTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIME 182

Query: 181 FARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPI 229
              +       +S+ G   ER RE  +   +               K  +V    +E P 
Sbjct: 183 LINNILKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPG 242

Query: 230 LRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 243 ARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLST 302

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G Y
Sbjct: 303 EMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIY 360

Query: 349 PPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P VDPL S S +        +  +    +   + R++E +DI  I G     +      V
Sbjct: 361 PAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTV 419

Query: 408 HQVPIIYDFLKQS 420
            +   I  FL Q 
Sbjct: 420 ARARKIERFLSQP 432


>gi|221078773|gb|ACL99461.1| ATP synthase beta subunit [Diospyros toposia]
          Length = 459

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|61968261|gb|AAX57057.1| ATP synthase beta subunit [Leptopus diplospermus]
          Length = 479

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|37720963|gb|AAN32484.1| ATP synthase beta subunit [Mayaca fluviatilis]
          Length = 482

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G+++D  G+ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVIFPPGRMPNIYNALVVKGRDTD--GRQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAALSVPVGGTTLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINENNLAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNGQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|4063552|gb|AAC98334.1| ATP synthase beta subunit [Muntingia calabura]
          Length = 456

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTIGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D   S+     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGSVD-TRTTAPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|12004145|gb|AAG43912.1|AF213781_1 ATP synthase beta subunit [Maesa tenera]
          Length = 487

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GHIIQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLHMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708286|emb|CAB90071.1| ATP synthase beta subunit [Eucryphia milliganii]
          Length = 490

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 48  KGRDTVGQQINVXCEVQQLLGNNRVRAVAMSATDXLMRGMEVIDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYPRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62085135|gb|AAX62973.1| ATP synthase beta subunit [Hevea sp. Gillespie 4272]
          Length = 482

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 35  KGRDTAGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 95  IFNVLGEPVDDLGPVD-TRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 153

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 154 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 213

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 214 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 274 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 332 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 391

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 392 ILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|183206692|gb|ACC54544.1| ATP synthase beta subunit [Campanula arvatica]
          Length = 487

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 10  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYKEMKDSGVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVGRARKIERFLSQP 423


>gi|156530121|gb|ABU75157.1| AtpB [Castela retusa]
          Length = 496

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 185/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ+I +  ++        V   
Sbjct: 19  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQLINVTCEVQQLLGNNRVRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I  + 
Sbjct: 76  AMSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKRA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 135 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 313 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 372

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 373 LQPRIVGEEHYETAQRVKQTLXRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|118430309|ref|YP_874743.1| ATP synthase CF1 beta subunit [Agrostis stolonifera]
 gi|125987717|sp|A1EA15|ATPB_AGRST RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|118201218|gb|ABK79587.1| ATP synthase CF1 beta subunit [Agrostis stolonifera]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPV 75
            G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    +
Sbjct: 20  TGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVAM 79

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P 
Sbjct: 80  SATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAPA 138

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 139 FIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 198

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 199 FGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAE 258

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     
Sbjct: 259 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--ST 316

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 317 KKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQ 376

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 377 PRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7688427|emb|CAB89733.1| ATP synthase beta subunit [Vochysia rufescens]
          Length = 491

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVKAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|229020524|ref|ZP_04177270.1| ATP synthase subunit beta [Bacillus cereus AH1273]
 gi|229026744|ref|ZP_04183077.1| ATP synthase subunit beta [Bacillus cereus AH1272]
 gi|228734539|gb|EEL85200.1| ATP synthase subunit beta [Bacillus cereus AH1272]
 gi|228740771|gb|EEL91023.1| ATP synthase subunit beta [Bacillus cereus AH1273]
          Length = 469

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGDVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|309322239|ref|YP_003934317.1| ATP synthase CF1 beta subunit [Monsonia speciosa]
 gi|197132380|gb|ACH47708.1| ATP synthase CF1 beta subunit [Monsonia speciosa]
 gi|300069332|gb|ADJ66452.1| ATP synthase CF1 beta subunit [Monsonia speciosa]
          Length = 498

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIDQIIGPVLDVVFPPGKLPYIYNALVVQG--RDTVGQQIHVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINDQKLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   ++   +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGDEHYEIAQRVKQTLQRYKELQDIIAILGLDELTEED-RLTVARARKMERFLSQP 434


>gi|7708217|emb|CAB90048.1| ATP synthase beta subunit [Crassula marnierana]
          Length = 490

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V        + + VV +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFSPGNMPNIYNAVVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G ++  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTG-ITSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  F  Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFFSQP 426


>gi|157285099|gb|ABV31289.1| ATPase [Vibrio gazogenes]
          Length = 439

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L + V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGL-KDVMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGTKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  + R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIERKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +      +  D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDSIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALSNTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERASRVSEGYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    + +     + + +KQ     S   VF++  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDTTKRQLDHGQKVTELMKQKQ--YSPMSVFEQAL 410


>gi|118917374|dbj|BAF40486.1| ATP synthase beta subunit [Sclerolinon digynum]
          Length = 489

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++  G++ D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVTGQDPD--GQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGTALSVPVGGATLGRIFNVLGEPIDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910750|gb|ABI48107.1| ATPase beta subunit [Riella helicophylla]
          Length = 456

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 108/394 (27%), Positives = 176/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           ++ +G+NS   GQ I +  ++        V    +   + +  G LV   G    +    
Sbjct: 9   LIVKGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMLVIDTGAPLTVPVGE 66

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P           F+TGI+V+D+  P  
Sbjct: 67  ATLGRIFNVLGEPVDNLGPVD-VSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 186 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 304 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 363

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|6467947|gb|AAF13246.1|AF197613_1 ATPase beta subunit [Cissampelos pareira]
          Length = 487

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D LGQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|54792127|ref|NP_599191.1| ATP synthase subunit beta, mitochondrial precursor [Rattus
           norvegicus]
 gi|114562|sp|P10719|ATPB_RAT RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|71681130|gb|AAH99743.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Rattus norvegicus]
          Length = 529

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ S  + +V   +    V    +   E
Sbjct: 58  TATGQIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|328785025|ref|XP_624156.3| PREDICTED: ATP synthase subunit beta, mitochondrial [Apis
           mellifera]
          Length = 516

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 119/448 (26%), Positives = 201/448 (44%), Gaps = 24/448 (5%)

Query: 7   TLAQLAEDYSKNLVVQGG---YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV- 62
            L+  + DY+K    +GG    I ++      V        + + +  Q +    + +V 
Sbjct: 31  ALSVNSRDYAKAASSKGGAQGKIVAVIGAVVDVQFDDALPPILNALEVQNRTPRLVLEVA 90

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
             +  + V    +   E +  G  V   G   RI   A   GR+IN +G+PID    +  
Sbjct: 91  QHLGENTVRTIAMDGTEGLVRGQSVLDSGYPIRIPVGAETLGRIINVIGEPIDERGPI-P 149

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            D    I +  P  ++    ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+   
Sbjct: 150 TDKLAPIHADAPEFVDMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMEL 209

Query: 182 ARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILR 231
             +         + + VGER RE  +   + +        D   K  +V    +E P  R
Sbjct: 210 INNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGAR 269

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 270 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 329

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP 
Sbjct: 330 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 387

Query: 351 VDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+ D      +   +   +  ++  ++  +DI  I G     +      V +
Sbjct: 388 VDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVAR 446

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              I  FL Q        +VF     KL
Sbjct: 447 ARKIQRFLSQP---FQVAEVFTGHAGKL 471


>gi|312869606|ref|ZP_07729757.1| ATP synthase F1, beta subunit [Lactobacillus oris PB013-T2-3]
 gi|311094892|gb|EFQ53185.1| ATP synthase F1, beta subunit [Lactobacillus oris PB013-T2-3]
          Length = 475

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 187/411 (45%), Gaps = 14/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCL--SQYVCLGD-FVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +  G +  +      V      +   + D   + +  +     +V + +   +V    + 
Sbjct: 1   MSSGKVVQVIGPVVDVEFPLDEKLPEINDALKIKESDDKTLTTEVALELGDGVVRTIAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GRV N LG+P+D     G     M I    P  
Sbjct: 61  GTDGLQRGMEVENTGASISVPVGDDTLGRVFNVLGEPVDNGPEFGPDAKRMPIHRDAPKY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+ 
Sbjct: 121 DELNNNTEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + +K+ +V    +E P  R    LT +TIAEYF      
Sbjct: 181 TGVGERTREGNDMYYEMKASGVLEKTAMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSITSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            +V V  D++ DP   +  + LD    L R L + G YP VDPL S S  L  +    + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLESTSTALTPEIVGKEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + + H++ R+ E +DI  I G     D      V +   I +FL QS
Sbjct: 359 YEVATQVQHVLQRYHELQDIISILGMDELSDEE-KTIVARARRIQNFLSQS 408


>gi|305671669|gb|ADM63144.1| ATP synthase beta subunit [Arctopus dregei]
          Length = 489

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GSITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|124361756|gb|ABN09320.1| ATP synthase beta subunit [Diospyros yatesiana]
          Length = 465

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910804|gb|ABI48134.1| ATPase beta subunit [Nowellia curvifolia]
          Length = 454

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/394 (27%), Positives = 175/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           +V +G+N+   GQ I +  ++        V    +   + +  G  V   G    +    
Sbjct: 9   LVVRGQNAA--GQEINVTCEVQQLLGNHKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGE 66

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P           F+TGI+V+D+  P  
Sbjct: 67  ATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 186 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 304 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 363

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|61968275|gb|AAX57064.1| ATP synthase beta subunit [Martretia quadricornis]
          Length = 479

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|75330508|sp|Q8MBQ3|ATPB_IPOQU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633253|gb|AAM52101.1| ATP synthase beta subunit [Ipomoea quamoclit]
          Length = 490

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|5758876|gb|AAD50850.1| ATP synthase beta subunit [Dietes flavida]
          Length = 496

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RFA +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFAQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|115349966|ref|YP_764399.1| CF1 beta subunit of ATP synthase [Stigeoclonium helveticum]
 gi|122165149|sp|Q06SG7|ATPB_STIHE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|98990180|gb|ABF60147.1| CF1 beta subunit of ATP synthase [Stigeoclonium helveticum]
          Length = 484

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/419 (26%), Positives = 182/419 (43%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPV 75
            G +  I      +   +  V  + + VV  GKN+         +V ++  D  V    +
Sbjct: 11  TGRLIQIIGPVVDIAFPAGNVPNIYNAVVISGKNTAGEDMCVTCEVQQLLGDRCVRAVAM 70

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G      G    +       GR+ N LG+P+D    + + +  + I    P 
Sbjct: 71  NPTEGLMRGMDATDTGTPLMVPVGKTTLGRIFNVLGEPVDNLGPV-ETEQKLPIHRSAPA 129

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 130 FTDLDTRLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 189

Query: 192 ISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 190 FAGVGERTREGNDLYMEMKESGVINESNLSESKVALVYGQMNEPPGARMRVGLTALTMAE 249

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 250 YFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TST 307

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 308 KDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 367

Query: 363 KAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                DE       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 PWIVGDEHYACAQKVKETLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 425


>gi|110006294|gb|ABG48642.1| ATP synthase subunit B [Euscaphis japonica]
          Length = 468

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           +YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 KYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 415


>gi|63091841|emb|CAH58771.1| ATP synthase alpha chain [Lactobacillus plantarum]
          Length = 367

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 154/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L      G+ +          G V  +  + V I  +G  + I  GD V   GR  
Sbjct: 1   RAHGL-DNALQGELLEFSNG---VYGMVQNLESNDVGIVVLGDFDGIREGDTVKRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+P+DG   + K   +  I  K P  M RQ V +  +TGI+ ID
Sbjct: 57  EVPVGDAMIGRVVNPLGQPVDGLGEI-KTTNTRPIEHKAPGIMQRQSVSEPLQTGIKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+   + ++  + D     +   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRKTGKTSVAIDAILNQKDQDMICVYVAIGQKDSTVRAQVETLKK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +  ++VV A   E   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 LGAMDYTIVVTAGPAEPAPLLYLAPYAGAAMGEEFMMNGKHVLIVYDDLSKQATAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  +     + +  I  +V
Sbjct: 236 LILRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPIIETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+      G  P +D  ASVSR+   A     K +  +L   +  + E   
Sbjct: 296 ISITDGQIFLDSDSFYSGVRPAIDAGASVSRVGGDAQIKAMKSVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --SFSQFGSDLDAAT 367


>gi|61968299|gb|AAX57076.1| ATP synthase beta subunit [Poranthera microphylla]
          Length = 479

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTSGQQINVVCEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|7708189|emb|CAB90039.1| ATP synthase beta subunit [Carpenteria californica]
          Length = 481

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V   S  +  + + +V +G+  D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPSGKMPNIYNALVVKGQ--DTAGQPINVACEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|305671637|gb|ADM63128.1| ATP synthase beta subunit [Aralia spinosa]
          Length = 489

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KDRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|217968672|ref|YP_002353906.1| F0F1 ATP synthase subunit beta [Thauera sp. MZ1T]
 gi|217505999|gb|ACK53010.1| ATP synthase F1, beta subunit [Thauera sp. MZ1T]
          Length = 466

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 171/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G +  +       GR+++ LG+PID    +   +
Sbjct: 52  LGDGVVRTIAMGSSDGLRRGMKVANTGTQISVPVGMGTLGRIMDVLGRPIDDAGPIETDE 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L   I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 112 LRA-IHQKAPKFDELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 231 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 348

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     +E   +   +   + +++E RDI  I G           +V +   I  FL 
Sbjct: 349 QLDPLVVGEEHYNVARQVQMTLQKYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|130076694|gb|ABO31967.1| ATPase alpha subunit [Kalanchoe pinnata]
          Length = 390

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 153/366 (41%), Gaps = 19/366 (5%)

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            I   G    I  GDLV   G     P      GRVI+ALG PIDG  +L   +    + 
Sbjct: 1   GIVVFGSDTAIKEGDLVTRSGSIVDVPAGKAMLGRVIDALGVPIDGRGALSDHE-RRRVE 59

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD- 188
            K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +     
Sbjct: 60  VKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMN 119

Query: 189 ----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
                       +   +G++   V + ++     N    S++V AT+ +   L+ +AP +
Sbjct: 120 SRATSDSETLYCVYVAIGQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYS 179

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER 
Sbjct: 180 GCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERA 239

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                +   G++TA+  +     + +  I  +V  I DG I L   L   G  P ++   
Sbjct: 240 AKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGL 299

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A     K++  SL   + ++ E   +     +   +D      +++   + +
Sbjct: 300 SVSRVGSAAQLKTMKQVRGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTE 356

Query: 416 FLKQSP 421
            LKQ  
Sbjct: 357 VLKQPQ 362


>gi|110915688|gb|ABH02632.1| ATP synthase beta subunit [Polypogon monspeliensis]
          Length = 490

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|121592742|ref|YP_984638.1| F0F1 ATP synthase subunit beta [Acidovorax sp. JS42]
 gi|190358248|sp|A1W2T7|ATPB_ACISJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|120604822|gb|ABM40562.1| ATP synthase F1 subcomplex beta subunit [Acidovorax sp. JS42]
          Length = 468

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 188/414 (45%), Gaps = 20/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGE 79
           VQG  +  I +V        +   + D +  +G  S    +V + +   +V    +G  +
Sbjct: 4   VQGKIVQCIGAVVDVEFPRDRMPKVYDALKLEG--SPLTLEVQQQLGDGVVRTIALGSSD 61

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G +V + G    +       GR+++ LG PID    + +  L+  I  K P     
Sbjct: 62  GLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQS-LTASIHRKAPAYDEL 120

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 121 SPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 180

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +TIAE F  
Sbjct: 181 GERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRD 240

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+I
Sbjct: 241 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSI 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 299 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVG 358

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +   + R++E RDI  I G    +       V +   I  FL Q 
Sbjct: 359 EEHYQVARQVQGTLQRYKELRDIIAILGMDE-LAPEDKLVVARARKIQRFLSQP 411


>gi|57868952|gb|AAW57472.1| ATP synthase beta subunit [Camellia sinensis]
          Length = 494

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|183206512|gb|ACC54454.1| ATP synthase beta subunit [Cyananthus lobatus]
          Length = 488

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 184/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I  I      V     +   + + +V +G   D LGQ I +  ++        V   
Sbjct: 10  SGRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    
Sbjct: 68  AMSATDGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 127 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 187 SVFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 305 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   ++   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 365 LQPRIVSDEHYETAQNVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKVERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|187935792|ref|YP_001884711.1| F0F1 ATP synthase subunit beta [Clostridium botulinum B str. Eklund
           17B]
 gi|226740181|sp|B2TK00|ATPB_CLOBB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|187723945|gb|ACD25166.1| ATP synthase F1, beta subunit [Clostridium botulinum B str. Eklund
           17B]
          Length = 463

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 119/406 (29%), Positives = 192/406 (47%), Gaps = 14/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S  +  L + +         + +V   +  DIV    +   E +
Sbjct: 6   GKVVQVIGPVVDIKFDSDSLPNLYNAISIDMGERTLIAEVEQHVGDDIVRTIAMEATEGL 65

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V       +       GR+ N LGKPID    +   ++   I    P   ++  
Sbjct: 66  KRGMDAVDTEKAISVPVGDQVLGRLFNVLGKPIDNAGEVEAEEI-YPIHRPAPSFKDQAV 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 125 EPEMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG +VLL +
Sbjct: 185 RSREGNDLYHEMRESGVIDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFI 244

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 245 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVP 302

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  S LD   VL+RS+ E G YP VDPL S SR+ D      +   + + 
Sbjct: 303 ADDLTDPAPATTFSHLDATTVLSRSIVELGIYPAVDPLESSSRILDPRLVGEEHYNVATK 362

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
           + +++ R++E +DI  I G     D   DKA V +   +  FL Q 
Sbjct: 363 VKNILERYKELQDIIAILGVDELSDE--DKAVVSRARKVQRFLSQP 406


>gi|111283728|gb|ABH09214.1| ATPase beta subunit [Neogrollea notabilis]
          Length = 443

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 10  GQEIDVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 69

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 70  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 128

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 129 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 188

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 189 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 248

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 249 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 306

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 307 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 366

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 367 LSEED-RSTVARARKIERFLSQP 388


>gi|119350543|gb|ABL63222.1| AtpB [Parallela transversalis]
          Length = 392

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 165/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +G  + S+ I
Sbjct: 5   VRAVSMNPTDGLMRGMEVIDTGTPLTVPVGKATLGRIFNVLGEPVDNLGPVGNQE-SLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRPAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYDCAQNVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|113910806|gb|ABI48135.1| ATPase beta subunit [Odontoschisma denudatum]
          Length = 454

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|56675902|emb|CAB89967.2| ATP synthase beta subunit [Fallopia sachalinensis]
          Length = 488

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIP 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R+LA +G YP VDPL S S +        +  K+   +   + R++E +DI  
Sbjct: 338 DATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|15422202|emb|CAC60316.1| ATP synthase beta subunit [Abrophyllum ornans]
          Length = 496

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   K    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGDEHYKTAQRVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|5758884|gb|AAD50858.1| ATP synthase beta subunit [Hedychium flavum]
          Length = 496

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    I       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMDVIDTGAPLSIPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|296393127|ref|YP_003658011.1| ATP synthase F1 subunit alpha [Segniliparus rotundus DSM 44985]
 gi|296180274|gb|ADG97180.1| ATP synthase F1, alpha subunit [Segniliparus rotundus DSM 44985]
          Length = 543

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/453 (22%), Positives = 179/453 (39%), Gaps = 28/453 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  +   +    E Y  +   +      G +   +     V+ L   V   + +   G  
Sbjct: 4   LTISPAEIQSAIEQYVASFTPESAREEIGEVIDTSDGIAHVSGL-PSVMTNELLEFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + +  D V +  +G  E I  G  V   G    +     + GRV+N LG+PID
Sbjct: 62  --VLGVALNLEEDAVGVVILGDFEGIEAGQQVKRTGDVLSVPVGDAFLGRVVNPLGQPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   + +  +  +    + RQ VE+   TGI  ID  T +  GQR  +      GK
Sbjct: 120 GLGDI-ASEQNRVLELQAASVLQRQPVEESLATGITAIDAMTAIGRGQRQLIIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                  +L+  +  +  D     + I   +G++G  +             + + +V A 
Sbjct: 179 TAVCIDAILNQKSNWESGDPSKQVRCIYVAIGQKGSTIAGVKTALEEAGALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP T   I +++   G +VL++ D +T+ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPYTGSAIGQHWMYAGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDEMGGGSMTGLPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   K +  SL   + ++ E         +   +D 
Sbjct: 359 LFNKGVRPAINVGISVSRVGGAAQTKGLKTVSGSLRLELAQYRELE---AFAAFASDLDA 415

Query: 402 ILDKAVHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
                + +     + LKQ   S +  ED    I
Sbjct: 416 ASKAQLERGARWVELLKQDQYSPVPVEDQIVSI 448


>gi|118917424|dbj|BAF40528.1| ATP synthase beta subunit [Xylosma congesta]
          Length = 489

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQQINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTQTTS-PIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|7708636|emb|CAB89985.1| ATP synthase beta subunit [Santalum album]
          Length = 469

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ+I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 26  KGRDTMGQLINVACEVQQLLGNYRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGEATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEDD-RLTVARARKIERFLSQP 410


>gi|6706180|emb|CAB65904.1| ATP synthase beta subunit [Gilia capitata]
          Length = 491

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|16943741|emb|CAD10754.1| ATP synthase, beta subunit [Kniphofia uvaria]
          Length = 495

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 50  KGRDIVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLIVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNIGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|270313041|gb|ACZ73602.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 465

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KSRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        D  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|284025137|ref|ZP_06379535.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           132]
          Length = 470

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPEEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|219552244|gb|ACL26837.1| ATP synthase beta chain [Reverchonia arenaria]
          Length = 423

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVSFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRTVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|20269416|gb|AAM17935.1| ATP synthase beta subunit [Halesia carolina]
          Length = 471

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 5   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIAGQPINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYEXAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|8517628|emb|CAB94373.1| ATP synthase beta subunit [Maesa myrsinoides]
          Length = 476

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 2   GHIIQIIGPVLDVXFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|270313033|gb|ACZ73598.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 476

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 6   GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 62

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 63  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSA 121

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 122 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 181

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 182 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTM 241

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 242 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 300 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 360 LQPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 418

Query: 420 S 420
            
Sbjct: 419 P 419


>gi|124361646|gb|ABN09265.1| ATP synthase beta subunit [Diospyros dasyphylla]
 gi|124361650|gb|ABN09267.1| ATP synthase beta subunit [Diospyros diepenhorstii]
 gi|124361652|gb|ABN09268.1| ATP synthase beta subunit [Diospyros digyna]
 gi|124361664|gb|ABN09274.1| ATP synthase beta subunit [Diospyros filipendula]
 gi|124361680|gb|ABN09282.1| ATP synthase beta subunit [Diospyros insidiosa]
 gi|124361740|gb|ABN09312.1| ATP synthase beta subunit [Diospyros tahanensis]
 gi|221078693|gb|ACL99421.1| ATP synthase beta subunit [Diospyros buxifolia]
 gi|221078771|gb|ACL99460.1| ATP synthase beta subunit [Diospyros sumatrana]
          Length = 465

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|89242540|gb|ABD64628.1| ATPase beta subunit [Lamium sp. Qiu 95019]
          Length = 436

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|15603359|ref|NP_246433.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|17372630|sp|Q9CKW1|ATPB_PASMU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12721878|gb|AAK03578.1| AtpD [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 457

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 185/410 (45%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+   N +  G V+     +   +V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYDALNVET-GLVLEVQQQLGGGVVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +      +       GR++N LG+PID    +G  + +  I    P  
Sbjct: 56  SSDGLKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPIDEQGEIGAEE-NWSIHRAPPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     +E  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHY 352

Query: 372 -LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 NVARGVQTTLQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|313678539|ref|YP_004056279.1| ATP synthase F1 subunit alpha [Mycoplasma bovis PG45]
 gi|312950786|gb|ADR25381.1| ATP synthase F1, alpha subunit [Mycoplasma bovis PG45]
          Length = 528

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/448 (24%), Positives = 186/448 (41%), Gaps = 21/448 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  +         + GYI +I      +  L      G+ V  +   
Sbjct: 1   MANKSTDISAIIKDRIRRFDSKIDYSEIGYIVTIGDGIALINGL-DNAKNGEIVKFK--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +  G V+ +  ++V +   G    +S GDL    G    +       GRVINA+G+PID
Sbjct: 57  DNITGLVLNLEEEVVGVAIFGNANALSEGDLCTRTGEVISVPVGNQLTGRVINAIGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L       EI    P  M+R  V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPLNNTK-RREIFKVAPGVMSRVEVNEPLETGIIAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +   + ++  + D   K I   +G++   V +  +          + V+V+ + E    +
Sbjct: 176 TSIAIDTIINQKDKNVKCIYVAIGQKNSTVAQITKKLQDAGAMDYTTVIVSGASELAPQQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   IAE + S+G + L+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGTAIAEEWMSEGKDCLIIYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER     S    G+ITA+  +     + +  I  +V SI DG I    +L   G+ P
Sbjct: 296 QLLERAAKVNSSYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTRENLFHSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K++ SSL   + ++ E +       +   +D      +  
Sbjct: 356 AVDVGFSVSRVGSSAQTKAMKEVSSSLKLELAQYNEMQ---AFAQFGSDLDDSTIAILKH 412

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              +Y+ LKQ        D F +    L
Sbjct: 413 GLKVYELLKQEQ--YYPIDHFSQTAILL 438


>gi|291537138|emb|CBL10250.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           M50/1]
          Length = 465

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 116/410 (28%), Positives = 186/410 (45%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN------LDIVYICPVGI 77
           G I+ I      +      +   +  +      D  G+ + +        D V    +G 
Sbjct: 6   GKITQIIGAVLDIKFTEGNLPEINDAIRIPLRGDQAGKELTVEVSQHLGDDTVRCIAMGS 65

Query: 78  GEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G D V   G   +       GR+ N LG PID  D    G     I    P   
Sbjct: 66  TDGLVRGMDAVATGGPISVPVGENTLGRMFNVLGDPIDEIDP-PAGVEKWPIHRPAPAFE 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
            +   ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+  
Sbjct: 125 EQATSQEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFT 184

Query: 195 -VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG  +
Sbjct: 185 GVGERTREGNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKD 244

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V 
Sbjct: 245 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQ 302

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL RS+AE G YP VDPL S SR+ D      E  
Sbjct: 303 AVYVPADDLTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHF 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     +      V +   +  FL Q 
Sbjct: 363 EVARGVQEILQKYKELQDIIAILGMDELSEDD-KLVVSRARKVQRFLSQP 411


>gi|110915684|gb|ABH02630.1| ATP synthase beta subunit [Poa billardierei]
          Length = 490

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|37721021|gb|AAN32513.1| ATP synthase beta subunit [Muilla maritima]
          Length = 494

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVIFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|124361714|gb|ABN09299.1| ATP synthase beta subunit [Diospyros oblonga]
          Length = 458

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQSINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910762|gb|ABI48113.1| ATPase beta subunit [Lunularia cruciata]
          Length = 470

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 32  GQEINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGAPLTVPVGEATLGRIFNVLG 91

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +   + +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 92  EPVDNLGPVD-ANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 150

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 151 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVAL 210

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 211 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 270

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 271 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 328

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 329 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 388

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 389 LSEED-RLTVARARKIERFLSQP 410


>gi|56675900|emb|CAB90089.2| ATP synthase beta subunit [Hymenanthera alpina]
          Length = 486

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFVQLETKLLIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708444|emb|CAB89911.1| ATP synthase beta subunit [Ilex crenata]
          Length = 485

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V  G   D +GQ I +  ++        V    
Sbjct: 13  GRISQIIGPVLDVAFPPGKIPNIYNALVVXG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +     +V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQKVKETLQRYKELQDIIAILGLDELSEDD-RLSVARARKIERFLSQP 426


>gi|4063568|gb|AAC98342.1| ATP synthase beta subunit [Pavonia multiflora]
          Length = 456

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|93007151|ref|YP_581588.1| F0F1 ATP synthase subunit beta [Psychrobacter cryohalolentis K5]
 gi|118573727|sp|Q1Q899|ATPB_PSYCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|92394829|gb|ABE76104.1| ATP synthase F1, beta subunit [Psychrobacter cryohalolentis K5]
          Length = 477

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/421 (25%), Positives = 183/421 (43%), Gaps = 26/421 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D ++  G  +    Q  ++   IV    +G  E
Sbjct: 1   MSSGRIVQIIGAVLDVEFNRNEVPKIFDALLVDGTETTLEVQ-QQLGDGIVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V + G    +       GR+++ LG+PID +  + + D    I  + P    +
Sbjct: 60  GLKRNLPVTNTGGPISVPVGIGTLGRIMDVLGRPIDEEGPV-QADERWSIHREAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    L+ +T+AEYF  
Sbjct: 179 GERTREGNDFYHEMQEAGVVNTEDFSKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRD 238

Query: 248 KGDNVL-------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
             D          L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +
Sbjct: 239 TKDPATGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGMLQERI--T 296

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR 
Sbjct: 297 STQSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQ 356

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +   +   +  ++ R++E +DI  I G     +      V++   I  FL Q
Sbjct: 357 LDPLVIGEEHYNVARGVQEVLQRYKELKDIIAILGMDELSEED-KLVVYRARKIQRFLSQ 415

Query: 420 S 420
            
Sbjct: 416 P 416


>gi|183206650|gb|ACC54523.1| ATP synthase beta subunit [Adenophora divaricata]
          Length = 470

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V   +  +       VV   K  D LGQ I +  ++        V   
Sbjct: 4   GRIGQIIGPVLDVAFPAGKMPNIYNALVV---KGRDTLGQPINVTCEVQQLLGNNRVRAV 60

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 61  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGXVD-TRTTSPIHRSA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 120 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 179

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 180 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 239

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 240 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 298 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 357

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 358 LQPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 416

Query: 420 S 420
            
Sbjct: 417 P 417


>gi|156530153|gb|ABU75173.1| AtpB [Picrasma quassioides]
          Length = 498

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMGVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|157368257|ref|YP_001476246.1| F0F1 ATP synthase subunit beta [Serratia proteamaculans 568]
 gi|166990375|sp|A8G7M8|ATPB_SERP5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157320021|gb|ABV39118.1| ATP synthase F1, beta subunit [Serratia proteamaculans 568]
          Length = 460

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 184/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  G N   L    ++   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVENGANKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P   +
Sbjct: 61  DGLRRGLKVTDLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEE-RWAIHRPAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               +   +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LANSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|4063556|gb|AAC98336.1| ATP synthase beta subunit [Ochroma pyramidale]
          Length = 456

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|260775671|ref|ZP_05884567.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608087|gb|EEX34256.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 450

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 147/436 (33%), Positives = 227/436 (52%), Gaps = 16/436 (3%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH-QGKNSDNLGQVIRINLDI 69
           LAE     L+   G ++SI          +    +GD       K++  L +V+  + + 
Sbjct: 18  LAEMKQAALIRVEGQVTSIQGTLIVSRFPAP--RIGDLCEVWPNKSATLLAEVVAFDDEK 75

Query: 70  VYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG-------K 121
           V++  +   + +  G  LV  +   R+       GRV++  G+  D     G        
Sbjct: 76  VWLSALNPLDGVEAGAKLVPLYLPHRVRVGDFALGRVLDGFGR--DMKGEGGVFSLLDVT 133

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              S +++       ++ R+     TG+R ID    L  GQR+G+FAG+G GK+TL++  
Sbjct: 134 QSGSAKVLIDDIDPTDKPRISHPMPTGVRAIDALLTLGEGQRVGLFAGAGCGKTTLIAEI 193

Query: 182 ARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D ++  L+GERGRE+ EFI  +   +   ++V+V ATSD S   R  A  TA  
Sbjct: 194 ARGMPCDVIVFGLIGERGRELNEFIEYELDEELQARTVLVCATSDRSSTERARAAFTATA 253

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  +G  VLL++DS+TRFA + REI   +GE P   G+P SV + +PRLLER GPS
Sbjct: 254 IAEAFRDQGKKVLLMIDSLTRFARAQREIGLAAGEPPGRGGFPPSVAALMPRLLERAGPS 313

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            K  G+ITA+ +VL++ D+  DP+AD  RS+LDGHI+L+R LA+ G YP +D L S+SR 
Sbjct: 314 SK--GSITAIYTVLIEQDSMADPVADEARSLLDGHIILSRKLADRGHYPAIDVLPSLSRT 371

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                + + +        L+  + +   +  +G Y+PG D + D AV Q   +  FL+QS
Sbjct: 372 MSNVTTQEHQIAARRFRELLAAYRDVELLIKLGEYQPGSDPLTDVAVDQHAAMMTFLQQS 431

Query: 421 PSDLSSEDVFQEITKK 436
             +    +   E  K+
Sbjct: 432 LHEPQPFENCLEQFKQ 447


>gi|197132376|gb|ACH47706.1| ATP synthase CF1 beta subunit [Geranium macrorrhizum]
          Length = 501

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 184/421 (43%), Gaps = 28/421 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      +      +       VV   +  D +GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDIVFPKGKMPYIYNALVVVVVQGRDTVGQKIYVTCEVQQLLGNNRVRAV 80

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 81  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 139

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 140 PDFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 199

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 200 SVFGGVGERTREGNDLYKEMKESGVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTM 259

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 260 AEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--T 317

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 318 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTM 377

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 SA+  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 378 LQPRIVSAEHYEIAQRVKETLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQ 436

Query: 420 S 420
            
Sbjct: 437 P 437


>gi|5001573|gb|AAD37033.1| ATP synthase beta subunit [Austrobaileya scandens]
          Length = 483

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 6   GRITQIIGPVLDVAFPPGKMPNIYNSLVV---KGQDTVGQQINVTCEVQQLLGNNRVRAV 62

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 63  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPA 121

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 122 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 181

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 182 SVSGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARLRVGLTALTM 241

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
            EYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 242 XEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 300 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 359

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 360 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 418

Query: 420 S 420
            
Sbjct: 419 P 419


>gi|319997188|gb|ADV91188.1| mitochondrial ATP synthase F1 beta subunit-like protein 1
           [Karlodinium micrum]
          Length = 514

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 186/416 (44%), Gaps = 19/416 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
              GG +S +      V        + + +  +G  +  + +V   +  ++V    +   
Sbjct: 40  AAPGGKVSQVIGAVVDVQFDGALPPILNALEVRGFENRLVLEVAQHLGENMVRTIAMDGT 99

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + ++ G  V   G   R+       GR+IN +G+PID    +   + S  I    P    
Sbjct: 100 DGLTRGQPVEDTGAPIRVPVGEGTLGRIINIIGEPIDELGPID-SNKSYPIHRPAPVFTE 158

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                    TGI+V+D+  P   G +IG+F G+G+GK+ ++     +         + + 
Sbjct: 159 MNTSAAQLLTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELIHNIALKHGGYSVFAG 218

Query: 195 VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +   + +   +         K+ +V    +E P  R    LT +T+AEYF 
Sbjct: 219 VGERTREGNDLYHEMMASGVIKENKAPGSKAALVYGQMNEPPGARARVALTGLTVAEYFR 278

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG
Sbjct: 279 DEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDLASLQERI--TTTQKG 336

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D + 
Sbjct: 337 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPSI 396

Query: 366 SAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  S   ++  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 397 VGQRHYDVARSTQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKVQRFLSQP 451


>gi|167755038|ref|ZP_02427165.1| hypothetical protein CLORAM_00542 [Clostridium ramosum DSM 1402]
 gi|237735237|ref|ZP_04565718.1| ATP synthase subunit beta [Mollicutes bacterium D7]
 gi|167705088|gb|EDS19667.1| hypothetical protein CLORAM_00542 [Clostridium ramosum DSM 1402]
 gi|229380982|gb|EEO31073.1| ATP synthase subunit beta [Coprobacillus sp. D7]
          Length = 468

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 191/407 (46%), Gaps = 13/407 (3%)

Query: 24  GYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G I S       +     +    L   +  Q  +   + +V   I  D+V    +G  + 
Sbjct: 6   GKIISAKGPVIDIQFDGDNNLPALNTAIEIQNGDELLVVEVAQHIGDDVVRCVAMGPTDG 65

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G    + G    +       GR+ N LG+PIDG ++LG     M I    P    ++
Sbjct: 66  VKRGMDALNTGNPISVPVGNETLGRMFNVLGQPIDGKEALGDSTKKMPIHRSAPTYAEQR 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  F  +   +     + + VG
Sbjct: 126 TETEILETGIKVVDLICPFIKGGKIGLFGGAGVGKTVLIQEFINNIATEHGGLSVFAGVG 185

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   +     +  K+ +V    +E P  R    LT +T+AE F  +   +VLL
Sbjct: 186 ERSREGNDLYYEMKESGVLSKTTLVFGQMNEPPGARLRVALTGLTMAEEFRDEQGQDVLL 245

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P   GY  ++ +E+  L ERI  +  +KG+IT+V +V 
Sbjct: 246 FIDNIFRFTQAGSEVSALLGRVPSQAGYQPTLATEMGALQERI--TSTKKGSITSVQAVY 303

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+RS+A  G YP VDPL S SR  D      +  ++ 
Sbjct: 304 VPADDLTDPAPATTFAHLDAKVVLDRSIAALGIYPAVDPLNSSSRALDPLVVGTEHYEVA 363

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ RF+E +DI  I G     +      V +   + ++L Q 
Sbjct: 364 HGVQQILQRFQELQDIIAILGMDELGEED-KLTVARARRVRNYLSQP 409


>gi|113910848|gb|ABI48156.1| ATPase beta subunit [Polytrichum juniperinum]
          Length = 448

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GK  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 17  GKEVNVTCEVQQLLGNNKVRAVAMSATDGLRRGLKVIDTGAPLSVPVGEATLGRIFNVLG 76

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 77  EPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 135

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 136 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 195

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 196 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 255

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 256 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 313

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 314 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDE 373

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 374 LSEED-RLTVARARKIERFLSQP 395


>gi|56675679|emb|CAB63702.2| atp synthase beta subunit [Pistacia vera]
          Length = 499

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI--------CP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++  +          
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRFRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|37721007|gb|AAN32506.1| ATP synthase beta subunit [Xeronema callistemon]
          Length = 497

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718115|gb|AAK72797.1| ATP synthase beta subunit [Limonium arborescens]
          Length = 472

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G +S I      V   S  +       VV   K  D  GQ I +  ++        V   
Sbjct: 8   GRVSQIIGPVLDVVFKSGKMPNIYNALVV---KGRDTSGQPINVTCEVQQLLGNNRVRTV 64

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 65  AISATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHKSA 123

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 124 PDFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 183

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 184 SVFGGVGERTREGNDLYKEMKESGVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTM 243

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 244 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 302 STKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 361

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 362 LQPRIVGDKHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 420

Query: 420 S 420
            
Sbjct: 421 P 421


>gi|4206600|gb|AAD11731.1| ATP synthase beta subunit [Skimmia anquetilia]
          Length = 474

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GHIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTSLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|259416515|ref|ZP_05740435.1| ATP synthase F1, beta subunit [Silicibacter sp. TrichCH4B]
 gi|259347954|gb|EEW59731.1| ATP synthase F1, beta subunit [Silicibacter sp. TrichCH4B]
          Length = 474

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V    +   + + +         + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVQFDGELPAILNSLTTDNNGKKLVLEVAQHLGENSVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    I       GR++N +G+P+D  + +   + +  I    P    +   
Sbjct: 66  RGQEVTDTGAPITIPVGNATLGRILNVVGEPVDEGEPIVAKE-TRAIHQPAPEFNEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+ S +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYKVASDVQQILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|207722132|ref|YP_002252570.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2]
 gi|206587307|emb|CAQ17891.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2]
          Length = 469

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+PID    +   D
Sbjct: 55  LGDGVVRTIALGSSDGLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGPI-ACD 113

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 114 EKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 173

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 174 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 233

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 234 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 291

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 292 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 351

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           +V +   I  FL 
Sbjct: 352 QLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILGMDELS-PEDKLSVGRARKIQRFLS 410

Query: 419 QS 420
           Q 
Sbjct: 411 QP 412


>gi|116254139|ref|YP_769977.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv. viciae
           3841]
 gi|118573731|sp|Q1MAZ2|ATPB_RHIL3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|115258787|emb|CAK09893.1| putative ATP synthase beta chain [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 478

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 185/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G ++ +      V    +   + + +      +  + +V   +  ++V    +   E 
Sbjct: 11  SVGRVTQVIGAVVDVAFEGELPKILNALETSNNGNRLVLEVAQHLGENVVRTIAMDSSEG 70

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    L        I    P  + + 
Sbjct: 71  LVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTA-HKRAIHQDAPSYVEQS 129

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 130 TESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 189

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   + +        G    K+ +V    +E P  R    LT +T+AE+F  +
Sbjct: 190 ERTREGNDLYHEMIESNVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQ 249

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +     +IT
Sbjct: 250 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTTTG--SIT 307

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      
Sbjct: 308 SVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGE 367

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 368 EHYEVARKVQSTLQRYKALQDIIAILGMDELSEDD-KIAVARARKIERFLSQP 419


>gi|113910808|gb|ABI48136.1| ATPase beta subunit [Radula complanata]
          Length = 464

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 26  GQEINVTCEVQQLLGNNKVRAVAMSGTDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 85

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 86  EPVDDLGPVN-VSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 144

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 145 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQKISESKVAL 204

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 205 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 264

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 265 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 322

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +       +   + R++E +DI  I G   
Sbjct: 323 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDE 382

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 383 LSEED-RLTVARARKIERFLSQP 404


>gi|14718201|gb|AAK72839.1| ATP synthase beta subunit [Quiina pteridophylla]
          Length = 486

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|4206590|gb|AAD11726.1| ATP synthase beta subunit [Clausena excavata]
          Length = 476

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 186/419 (44%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPV 75
            G+IS I      V     +   + + +V +G+++     +   +V ++  +  V    +
Sbjct: 4   SGHISQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAM 63

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P 
Sbjct: 64  SATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHKSAPA 122

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 123 FIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 182

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 183 FGGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAE 242

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 243 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 300

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 301 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 360

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 PRIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|66276285|gb|AAY44157.1| ATP synthase beta subunit [Marah macrocarpus]
          Length = 488

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTAGQEINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|55056890|emb|CAF21946.1| ATP synthase beta subunit [Araucaria araucana]
          Length = 448

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ +  GQ+I++  ++        V    +   + +  G  VF  G    +   A   GR
Sbjct: 23  KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 82

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P           F+TGI+V+D+  P   G +I
Sbjct: 83  IFNVLGEPVDDLGPVN-ARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKI 141

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         + S VGER RE  +   +             
Sbjct: 142 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNIS 201

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 202 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 261

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 262 LGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 319

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 320 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 379

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 380 ILGLDELSEED-RLTVARARKIERFLSQP 407


>gi|255733192|gb|ACU31053.1| F1F0-ATP synthase beta subunit [Procambarus clarkii]
          Length = 525

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/414 (25%), Positives = 191/414 (46%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G + ++      V    +   + + +  + +    + +V   +  + V    +   E
Sbjct: 55  VANGKVVAVIGAVVDVQFDGELPPILNSLEVENRTPRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G++V   G    I       GR+IN +G+PID    +   +    I ++ P  ++ 
Sbjct: 115 GLVRGNVVRDTGGPISIPVGPGTLGRIINVIGEPIDERGPV-PTEFYSTIHAEAPDFVDM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNAAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDPNIIG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++  ++   +  +DI  I G     +      V +   I  FL Q 
Sbjct: 412 AEHYNVARAVQKILQDHKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 464


>gi|311105957|ref|YP_003978810.1| flagellar protein export ATPase FliI [Achromobacter xylosoxidans
           A8]
 gi|310760646|gb|ADP16095.1| flagellar protein export ATPase FliI [Achromobacter xylosoxidans
           A8]
          Length = 491

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 152/447 (34%), Positives = 232/447 (51%), Gaps = 30/447 (6%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S +  +  G I+  T +    T L   V     + + +G +     +V+  +   +
Sbjct: 30  IRAASTDPWLVSGKITRATGLVLHATGLRLPVGAAARIEIARGHDHWADAEVVGFDGHTL 89

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 90  YLMPQADISGLPPGARVVPGEPPVQRQIPLPRKAELNGNAKPQLGRHLPVGNALLGRVLD 149

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG   L   +L+  + ++    ++R  ++    TG+R I+    +  GQR+G+F
Sbjct: 150 GAGRPLDGLGPLTGAELA-PLSAQPINPLSRAPIDTVLDTGVRAINGLLTVGRGQRMGLF 208

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D 
Sbjct: 209 AGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADV 268

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S +LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SV
Sbjct: 269 SALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSV 328

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G        + G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R L
Sbjct: 329 FAKLPMLVERAGMGAPGASGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHL 388

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      + ++  +V      + RF+  RD+  +G Y  G D  
Sbjct: 389 AEAGHYPAIDIEASISRAMTSLITPEQFAVVRRFKQSLSRFQRNRDLIAVGAYAAGNDPQ 448

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDV 429
           LD+A+ + P +  FL+Q   +    + 
Sbjct: 449 LDEAIARYPRLEAFLQQDIGENVGYEA 475


>gi|260222427|emb|CBA31980.1| Flagellum-specific ATP synthase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 478

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 161/437 (36%), Positives = 234/437 (53%), Gaps = 27/437 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEE 80
             G ++ +T +    + +   V +G   V   K  +  L +V+  + D  Y+ P G    
Sbjct: 36  VRGTLTKLTGLVLEASGI--RVPVGSQCVVTMKAREPVLAEVVGFSGDRAYLMPAGDVHG 93

Query: 81  IS----------------LGDLVFHW-----GRFRISPSACWCGRVINALGKPIDGDDSL 119
           +S                LG+          G  R+       GRV+++ G P+D    L
Sbjct: 94  LSSGAGVAAAAAFVPVPRLGEKTVPADAASAGMLRLPLGDGLLGRVVDSQGFPMDRMGPL 153

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 + +  K   AM+R  V +   TG+R I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 154 ADVSARV-LDRKPINAMDRAPVREALDTGVRSINALLTVGRGQRLGLFAGSGVGKSVLLG 212

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR    D +++ L+GERGREV+EFIED LG D  ++SVVV A +D  P+LR      A
Sbjct: 213 MMARYTQADVIVVGLIGERGREVKEFIEDILGVDGRERSVVVAAPADAPPLLRMQGASYA 272

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G +VLL++DS+TR+A + REIA   GE P  +GYP S F++LP+L+ER G
Sbjct: 273 TAIAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPQLVERSG 332

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP +D   S S
Sbjct: 333 NGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAIDVEQSAS 392

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+          +       L  ++++ RD+  IG Y PG D +LD+A+   P +  FL+
Sbjct: 393 RVMHNVVDRGHFEQARRFRSLYSKYQKGRDLVQIGAYAPGSDPVLDEAIALQPGMIQFLQ 452

Query: 419 QSPSDLSS-EDVFQEIT 434
           Q   + +  E    E+ 
Sbjct: 453 QDMQEAAPMEQALAELA 469


>gi|302558370|ref|ZP_07310712.1| ATP synthase F1, alpha subunit [Streptomyces griseoflavus Tu4000]
 gi|302475988|gb|EFL39081.1| ATP synthase F1, alpha subunit [Streptomyces griseoflavus Tu4000]
          Length = 530

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 90/447 (20%), Positives = 174/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVTRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + I   +G++G  +         +   + + +V A + +    +
Sbjct: 188 INQRDNWRTGDPKKQVRCIYVAIGQKGSTIASVRRALEENGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKAQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ+  + +++ED    +  
Sbjct: 425 GQRMVELLKQNQYEPMATEDQVVSVWA 451


>gi|110915608|gb|ABH02592.1| ATP synthase beta subunit [Calotheca brizoides]
 gi|110915612|gb|ABH02594.1| ATP synthase beta subunit [Briza subaristata]
 gi|110915632|gb|ABH02604.1| ATP synthase beta subunit [Echinopogon caespitosus]
 gi|110915650|gb|ABH02613.1| ATP synthase beta subunit [Gymnachne koelerioides]
          Length = 490

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62902873|gb|AAY19351.1| ATP synthase beta subunit [Oxalis stricta]
          Length = 479

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   E +  G  V   G    +       GR+ N LG
Sbjct: 38  GQQIDVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLG 97

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 98  EPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 156

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 157 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVAL 216

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 217 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 276

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 277 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 334

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 335 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDE 394

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 395 LSEED-RLTVARARKIERFLSQP 416


>gi|110915600|gb|ABH02588.1| ATP synthase beta subunit [Bromus inermis]
 gi|110915602|gb|ABH02589.1| ATP synthase beta subunit [Bromus suksdorfii]
          Length = 490

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|323715454|gb|ADY04795.1| ATP synthase beta subunit [Hydrostachys polymorpha]
          Length = 493

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGXEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINENNISESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 429


>gi|37721005|gb|AAN32505.1| ATP synthase beta subunit [Xanthorrhoea resinosa]
          Length = 497

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKXLQDIIAILGLDELSEXD-RLTVARARKIERFLSQP 434


>gi|113910788|gb|ABI48126.1| ATPase beta subunit [Solenostoma hyalinum]
          Length = 472

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V QG+N+   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVAFSPGKMPNIYNSLVVQGQNAA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     S  I    P      
Sbjct: 63  LMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TSFPIHRSAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEQNISESKVALVYGQXNEPPGARMRVGLTALTMAEYFRDI 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|32815633|gb|AAP88213.1| ATP synthase beta subunit [Carpinus betulus]
          Length = 457

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKSGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|1168577|sp|P42466|ATPB_HERAU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|560837|emb|CAA54203.1| ATPase beta-subunit [Herpetosiphon aurantiacus]
          Length = 471

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/417 (27%), Positives = 196/417 (47%), Gaps = 21/417 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNL-GQVIR-INLDIVYICPVG 76
           +  G I  IT V       +  +        +  G+   +L  +V + +   +V    + 
Sbjct: 1   MATGKILQITGVVIDAEFPADSLPQIYNALEIPLGQGRPSLICEVQQQLGDSVVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GRV +  G+PIDG+  +G    +M I    P  
Sbjct: 61  TTDGLVRGMDVINTGAPISVPVGPETLGRVFDVQGRPIDGEGPVGTTK-TMPIHRPAPTF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVII 192
             +    + F+TGI+VID+  P   G + GVF G+G+GK+ ++     +   +     + 
Sbjct: 120 EEQSNRAELFETGIKVIDLIAPFTKGGKTGVFGGAGVGKTVIIQELISNIAKEQSGYSVF 179

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  + I +               K+V+V    +E P  R    L+A+T+AEY
Sbjct: 180 AGVGERSREGNDLIHEMKDSKIPGTDQTVFDKTVMVFGQMNEPPGARLRVALSALTMAEY 239

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VLL +D+I RF  +  E++   G +P   GY  ++ +E+  L ERI  +  + 
Sbjct: 240 FREEGRDVLLFVDNIFRFTQAGSEVSALLGRMPSQVGYQPTLGTEMGELQERI--TSTKT 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D++ DP   +  + LD  I L RS++E+G YP VDPLAS SR+ D  
Sbjct: 298 GSITSLQAVYVPADDYTDPAPATTFAHLDATISLERSISEKGIYPAVDPLASTSRILDPN 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++ + +  ++ R+++ +DI  I G     D      V +   +  F  Q 
Sbjct: 358 IVGEEHYRVATEVQRMLQRYKDLQDIIAILGVEELSDDD-KLTVSRARKLERFFSQP 413


>gi|329955014|ref|ZP_08295995.1| ATP synthase F1, alpha subunit [Bacteroides clarus YIT 12056]
 gi|328526304|gb|EGF53319.1| ATP synthase F1, alpha subunit [Bacteroides clarus YIT 12056]
          Length = 528

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 99/450 (22%), Positives = 175/450 (38%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE +    +      + + G +  ++     +  L +     + +           
Sbjct: 15  LRKQLEGIDTRVQ------LDEIGTVLQVSDGVARIYGL-RNAEANELLEFDNG---IKA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G +V    R   I       GRVI+ LG P+DG   +
Sbjct: 65  IVMNLEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIMVGEGMLGRVIDPLGAPLDGKGLI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
           G     M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 125 GGELCEMPLERKAPGVIFRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 184

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            T+++  A  +  D    I   +G++G  V   +     +     ++VV AT+ +   L+
Sbjct: 185 DTIINQRANYEAGDPVYCIYVAIGQKGSTVASIVNTLRENGAMDYTIVVAATAGDPAALQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G + L++ D +++ A + RE++           YP  +F    
Sbjct: 245 YYAPFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 304

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 305 RLLERAAKIISQEEVAREMNDLPESLKGRVKGGGSLTALPIIETQAGDVSAYIPTNVISI 364

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+ +L  +G  P +D   SVSR+   A     KK+  +L     ++ E      
Sbjct: 365 TDGQIFLDTNLFNQGNRPAIDVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---A 421

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +   +D +    + +       L Q  
Sbjct: 422 FTKFSGDMDPVTALTIDKGQKNTRLLVQPQ 451


>gi|323715448|gb|ADY04792.1| ATP synthase beta subunit [Hydrostachys multifida]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 16  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVS 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 429


>gi|257852960|gb|ACV71491.1| ATP synthase beta subunit [Lophira lanceolata]
          Length = 479

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|210135582|ref|YP_002302021.1| flagellum-specific ATP synthase [Helicobacter pylori P12]
 gi|308185180|ref|YP_003929313.1| flagellum-specific ATP synthase [Helicobacter pylori SJM180]
 gi|210133550|gb|ACJ08541.1| flagellar protein export ATPase FliI [Helicobacter pylori P12]
 gi|308061100|gb|ADO02996.1| flagellum-specific ATP synthase [Helicobacter pylori SJM180]
          Length = 434

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 159/424 (37%), Positives = 232/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGSECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID    L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLVQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|110915616|gb|ABH02596.1| ATP synthase beta subunit [Cynosurus cristatus]
          Length = 490

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESSATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|149029718|gb|EDL84889.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide, isoform CRA_a [Rattus norvegicus]
          Length = 529

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ S  + +V   +    V    +   E
Sbjct: 58  TATGQIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|83646778|ref|YP_435213.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
 gi|83634821|gb|ABC30788.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396]
          Length = 416

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 159/407 (39%), Positives = 234/407 (57%), Gaps = 7/407 (1%)

Query: 36  VTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-R 92
           + C      LG+       G+ +    +V+      V + P+G    I +G  V   G  
Sbjct: 9   LECAGPDAFLGEVCEVFSPGQLTSIAAEVVGFRHGRVLLMPLGRVTGIHVGSEVVATGLP 68

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
             ++ +    G+V+NA G P+DG   L     S  +  +    M R   ++    G+RVI
Sbjct: 69  ASVTVNDGMLGKVVNAFGTPLDG-GVLSSPGKSYPLYREPINPMERAPCDEPLNLGVRVI 127

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211
           D F  +  GQR+G+FAGSG+GKSTLL M A+    +  +I+L+GERGREV EFI+D LG 
Sbjct: 128 DAFCAMAKGQRVGIFAGSGVGKSTLLGMIAKQCDAEVNVIALIGERGREVSEFIQDNLGS 187

Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271
           D LKKSVVV AT+DE  ++R  A   A  IAEYF  KG +V+L +DSITR A + REI  
Sbjct: 188 DGLKKSVVVAATADEPALVRVHAAFVATAIAEYFKDKGKHVMLYMDSITRLATAQREIGL 247

Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331
             GE P +RGY  S FS LPRL ER G   K  G+I+A+ +VLV+GD+ N+P++D+VRSI
Sbjct: 248 AIGEPPTSRGYTPSTFSLLPRLTERAG-IFKSGGSISALYTVLVEGDDFNEPVSDTVRSI 306

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           LDGHI+L R LA +G +P +D   S+SRL  +    +++  V  L  L   ++E++++  
Sbjct: 307 LDGHIMLKRQLAHQGIFPAIDIRESMSRLFPRVTGKEQQMAVRELIRLESLYQESKELIE 366

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITKKL 437
           +G Y+ G D  +D+A+     +  F+ QS  +  S+ D+   + + L
Sbjct: 367 LGAYKQGGDPEIDQAIRVHKALNKFISQSEGESGSNRDIVTALKQVL 413


>gi|160890316|ref|ZP_02071319.1| hypothetical protein BACUNI_02757 [Bacteroides uniformis ATCC 8492]
 gi|270296886|ref|ZP_06203085.1| ATP synthase F1, alpha subunit [Bacteroides sp. D20]
 gi|317479138|ref|ZP_07938278.1| ATP synthase F1 [Bacteroides sp. 4_1_36]
 gi|156860048|gb|EDO53479.1| hypothetical protein BACUNI_02757 [Bacteroides uniformis ATCC 8492]
 gi|270272873|gb|EFA18736.1| ATP synthase F1, alpha subunit [Bacteroides sp. D20]
 gi|316904710|gb|EFV26524.1| ATP synthase F1 [Bacteroides sp. 4_1_36]
          Length = 528

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 100/450 (22%), Positives = 174/450 (38%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE +    +      + + G +  ++     +  L +     + +           
Sbjct: 15  LRKQLEGIDTRVQ------LDEIGTVLQVSDGVARIYGL-RNAEANELLEFDNG---IKA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G +V    R   I       GRVI+ LG P+DG   +
Sbjct: 65  IVMNLEEDNVGAVLLGPTDKIKEGFIVKRTKRIASIMVGEGMLGRVIDPLGAPLDGKGLI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
           G     M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 125 GGELYEMPLERKAPGVIFRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 184

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            T+++  A  D  D    I   +G++G  V   +           ++VV AT+ +   L+
Sbjct: 185 DTIINQRANFDAGDPVYCIYVAIGQKGSTVASIVNTLHQYGAMDYTIVVAATAGDPAALQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G + L++ D +++ A + RE++           YP  +F    
Sbjct: 245 YYAPFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 304

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 305 RLLERAAKIISQEEVAREMNDLPDSLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISI 364

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+ +L  +G  P +D   SVSR+   A     KK+  +L     ++ E      
Sbjct: 365 TDGQIFLDTNLFNQGNRPAIDVGISVSRVGGNAQVKAMKKVAGTLKIDQAQYRELE---A 421

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +   +D +    + +       L Q  
Sbjct: 422 FTKFSGDMDPVTALTIDKGQKNTRLLVQPQ 451


>gi|115345328|ref|NP_001041705.1| H+ transporting ATP synthase beta subunit isoform 2 [Bombyx mori]
 gi|95102940|gb|ABF51411.1| H+ transporting ATP synthase beta subunit isoform 2 [Bombyx mori]
          Length = 513

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 195/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +  Q ++   + +V   +  + V    +   E + 
Sbjct: 47  GKVVAVIGAVVDVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 106

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   RI   A   GR+IN +G+PID    +   D +  I ++ P  ++    
Sbjct: 107 RGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQ 165

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 166 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 225

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 226 TREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 285

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 286 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 343

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      + 
Sbjct: 344 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 403

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 404 YNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEV 459

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 460 FTGHAGKL 467


>gi|7708141|emb|CAB89940.1| ATP synthase beta subunit [Afrostyrax sp. Cheek 5007]
          Length = 491

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 47  KGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGVPLSVPVGEATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 107 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 165

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 166 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNFA 225

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 226 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G IT++ +V V  D+  DP   +  + L
Sbjct: 286 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDPAPATTFAHL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +  +    D   K    +   + R++E +DI  
Sbjct: 344 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKTAQRVKQTLQRYKELQDIIT 403

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + G     +      V +   I  FL Q 
Sbjct: 404 VLGLDELSEED-RLTVERARKIERFLSQP 431


>gi|24940250|emb|CAD43383.1| ATP synthase beta subunit [Ogastemma pusillum]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     Q   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGQMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVVDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|333030312|ref|ZP_08458373.1| ATP synthase subunit alpha [Bacteroides coprosuis DSM 18011]
 gi|332740909|gb|EGJ71391.1| ATP synthase subunit alpha [Bacteroides coprosuis DSM 18011]
          Length = 528

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 97/457 (21%), Positives = 177/457 (38%), Gaps = 42/457 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +Q+ LE +    +      + + G I  ++     +  L +     + +  +        
Sbjct: 14  LQRQLEGIDTKVQ------LDEIGTILQVSDGVVRIYGL-KNAEANELLELENG---IKA 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  +++  GD++    R   IS      GRVI+ LG+P+DG  ++
Sbjct: 64  IVMNLEEDNVGAVLLGPTDKVKEGDIIKRTKRIAAISVGENMLGRVIDPLGQPLDGKGAI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
           G     M +  K P  + RQ V +  +TGI+ +D   P+  GQR  +      GK+ +  
Sbjct: 124 GGDLCRMPLERKAPGVIFRQPVSEPLQTGIKAVDAMIPIGRGQRELIIGDRQTGKTAIAL 183

Query: 180 MFARSDCFD-------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
               +   +         I   +G++   V   +E    +     ++VV AT+ E   L+
Sbjct: 184 DAIINQRTNYEEGKPVYCIYVAIGQKASTVASIVETLAKNKAMEYTIVVAATAGEPAALQ 243

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A      I EYF   G + L++ D +++ A + RE++           YP  +F    
Sbjct: 244 YFAAFAGAAIGEYFRDTGKHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 303

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 304 RLLERAAKIISQQEVAEKMNDLPESLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISI 363

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+  L  +G  P ++   SVSR+   A     KK+  +L     ++ E      
Sbjct: 364 TDGQIFLDTDLFNQGNRPAINVGISVSRVGGNAQIKSMKKVAGTLKIDQAQYRELE---A 420

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +D +    + +       L Q   +    +
Sbjct: 421 FSKFSGDMDPVTAMTLDKGKKNTQLLIQPQYEPVPVE 457


>gi|311086391|gb|ADP66472.1| flagellum-specific ATP synthase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311086971|gb|ADP67051.1| flagellum-specific ATP synthase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087547|gb|ADP67626.1| flagellum-specific ATP synthase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 463

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 155/449 (34%), Positives = 244/449 (54%), Gaps = 21/449 (4%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDN 58
           KN+ +     E  S   ++  G + SI  +   V  L+    +G   + +    GKN++ 
Sbjct: 20  KNISSFESRIEKLSD--IINYGRLVSINGLILEVVGLNT--SIGSECLIERTIDGKNANI 75

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------RISPSACWCGRVINAL 109
             +VI  + +  ++        I  G  VF   +          ++       GRV++  
Sbjct: 76  NAEVIGFSGEKTFLLSFEDIHGIFPGARVFS--KIASNSNFFIKKLPLGMELLGRVLDGR 133

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    +        I +     +NR  + +   TGIR I+    +  GQ+IG+F+ 
Sbjct: 134 GQPLDQLPKID-HKYYSTIKNYSINPLNRTPITEVLDTGIRAINGLLTIGRGQKIGIFSS 192

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
           SGIGKS LL M AR    D ++I+L+GERGREV++FIE+ LG   L +SV++ A +D SP
Sbjct: 193 SGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVIIAAPADVSP 252

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +L+  A   A  IAEYF     +VLLI+DS+TR+A + REI+ + GELPV++GYP+S+FS
Sbjct: 253 LLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSKGYPSSIFS 312

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           ++P L+ER G   K KG+IT+  +VL +G++  DP++   RS+LDGHI+L+R  A+ G Y
Sbjct: 313 KIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSRYYADLGHY 372

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  +S+SR+     +A +         L+  ++  RD+  IG Y  G D+ILD A+ 
Sbjct: 373 PAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTDVILDHAIK 432

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             P +  FL+Q  S+ S      E   K+
Sbjct: 433 IWPKLEKFLQQEISEKSDYLFSCEALNKI 461


>gi|269925185|ref|YP_003321808.1| ATP synthase F1, beta subunit [Thermobaculum terrenum ATCC BAA-798]
 gi|269788845|gb|ACZ40986.1| ATP synthase F1, beta subunit [Thermobaculum terrenum ATCC BAA-798]
          Length = 471

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/409 (27%), Positives = 184/409 (44%), Gaps = 14/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G I  IT     V      +   L    V +      + +V   +  D V    +   + 
Sbjct: 9   GRIVQITGPVVDVEFPDGNLPEILNAVRVEREDGEPVVLEVQAHLGNDWVRCVSMRSTDG 68

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR+ + LG+P+D    +   D    I    P    + 
Sbjct: 69  LYRGMEAIDTGEPIAVPVGPATLGRIFDVLGQPVDEKGPVN-ADERWPIHRPAPEFEEQS 127

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              + F+TG++VID+  P   G + GVF G+G+GK+ ++     +         + + VG
Sbjct: 128 TEAEVFETGLKVIDLIAPFTRGGKTGVFGGAGVGKTVIIMELINNVAKQHSGVSVFAGVG 187

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +  E+     +   +V+V    +E P  R    LT +T+AEYF      +VLL
Sbjct: 188 ERTREGTQLYEEMTESGVLGSTVLVFGQMNEPPGARLRVGLTGLTMAEYFRDVEGRDVLL 247

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  ++G IT+V +V 
Sbjct: 248 FMDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKRGAITSVQAVY 305

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D++ DP   +  + LD  I L RS+AE G YP VDPLAS SR+ D      +  ++ 
Sbjct: 306 VPADDYTDPAPATTFAHLDATIALERSIAERGIYPAVDPLASTSRILDPRIVGEEHYEVA 365

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             +  ++ R+++ +DI  I G     D      V +   I  FL Q   
Sbjct: 366 RGVQRVLQRYKDLQDIIAILGVEELSDED-KLIVARARKIERFLSQPMF 413


>gi|170724356|ref|YP_001752044.1| F0F1 ATP synthase subunit beta [Pseudomonas putida W619]
 gi|226740663|sp|B1JFU1|ATPB_PSEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169762359|gb|ACA75675.1| ATP synthase F1, beta subunit [Pseudomonas putida W619]
          Length = 458

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + + +  +G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDGVPSVYNALKVEGAETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+++ LG PID    +G+ +    I    P   ++
Sbjct: 60  GLKRGLNVIDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RWGIHRDAPSFADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G++VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  +  
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELSESD-KQLVSRARKIQRFLSQP 402


>gi|23503589|dbj|BAC20391.1| ATP synthase beta-subunit [Scenedesmus quadricauda]
          Length = 376

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  VF  G+   +       GR+ N LG+P+D    + K + S+ I   
Sbjct: 1   VAMNPTDGLMRGMEVFDTGKPLSVPVGKATLGRIFNVLGEPVDNLGPV-KNEESLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLTDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYGCAQSVKRTLQRYKELQDIIAILGLDELSEED-RLVVARARRIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|146278237|ref|YP_001168396.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17025]
 gi|189081340|sp|A4WUM7|ATPB_RHOS5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145556478|gb|ABP71091.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17025]
          Length = 475

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 105/420 (25%), Positives = 185/420 (44%), Gaps = 20/420 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G ++ +      V        + + +     +   + +V   +  + V    +   E
Sbjct: 4   ASQGKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATE 63

Query: 80  EISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V    G   +       GR++N +G+PID    +  GD +  I    P    +
Sbjct: 64  GLVRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVS-GDSTRAIHQPAPTFAEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 123 STTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGV 182

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +   + +             K  +V    +E P  R    LT +T+AE F  
Sbjct: 183 GERTREGNDLYHEMIDSGVIKIDNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRD 242

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+
Sbjct: 243 QSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGS 300

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D    
Sbjct: 301 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIV 360

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   +  ++  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 361 GEEHYNVARAVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 418


>gi|323715426|gb|ADY04781.1| ATP synthase beta subunit [Alangium platanifolium]
          Length = 483

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRTVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|305671649|gb|ADM63134.1| ATP synthase beta subunit [Heteromorpha arborescens var.
           abyssinica]
          Length = 482

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/425 (26%), Positives = 184/425 (43%), Gaps = 29/425 (6%)

Query: 19  LVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-------- 69
           L    G I+ I      V     +   + + +V +G   D  GQ I +  ++        
Sbjct: 1   LEKNLGNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNR 58

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I
Sbjct: 59  VRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPI 117

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 118 HRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 177

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 178 HGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLT 237

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 238 ALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 298 I--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 355

Query: 357 VSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +    +   + R++E +DI  I G     +      V +   I  
Sbjct: 356 TSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIER 414

Query: 416 FLKQS 420
           FL Q 
Sbjct: 415 FLSQP 419


>gi|183206684|gb|ACC54540.1| ATP synthase beta subunit [Campanula herminii]
          Length = 465

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKLA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|183206628|gb|ACC54512.1| ATP synthase beta subunit [Legousia falcata]
          Length = 462

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 14  KGRDPLGQPINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 73

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 74  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 132

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 133 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 192

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 193 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 252

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 253 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTFAHL 310

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 311 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRLVSDEHYKTAQSVKQTLQRYKELQDIIT 370

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 371 ILGLDELSEED-RLTVARARKIERFLSQP 398


>gi|195183541|dbj|BAG66982.1| ATP synthase beta subunit [Rinorea subintegrifolia]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V   +  +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GRIAQIIGPVLDVAFPTGKMPNIYNALVV---KGRDTVGQQINVTCEVQQLLGNNRVRTV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  +E       +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPQIVGEEHYGTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|194033156|ref|YP_002000494.1| ATP synthase CF1 beta subunit [Brachypodium distachyon]
 gi|193075564|gb|ACF08647.1| ATPase beta subunit [Brachypodium distachyon]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMRESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|154001284|gb|ABS57117.1| ATP synthase beta subunit [Wollemia nobilis]
          Length = 424

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  VF  G    +       GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMKVFDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-ARAKS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + S VGER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGCLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|156846713|ref|XP_001646243.1| hypothetical protein Kpol_1013p57 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116917|gb|EDO18385.1| hypothetical protein Kpol_1013p57 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 505

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 115/428 (26%), Positives = 195/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G + ++      V    + +  + + +  Q  N   + +V   +  + V    +   E +
Sbjct: 38  GKVRAVIGAIVDVQFEQENLPAILNALEIQTPNGKLVLEVSQHLGENTVRTIAMDGTEGL 97

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G+ V   G    +       GR+IN +G+PID    + K  L   I ++ P  + +  
Sbjct: 98  VRGENVIDTGAPISVPVGRETLGRIINVIGEPIDERGPI-KSKLRKPIHAEPPSFVEQST 156

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 157 EAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGE 216

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +   
Sbjct: 217 RTREGNDLYREMRETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQ 276

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V
Sbjct: 277 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSV 334

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    + 
Sbjct: 335 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEH 394

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             + + +   +  ++  +DI  I G     +      V +   I  FL Q     +  +V
Sbjct: 395 YDVATRVQETLQAYKSLQDIIAILGMDELSEQD-KITVERARKIQRFLSQP---FAVAEV 450

Query: 430 FQEITKKL 437
           F  I  KL
Sbjct: 451 FTGIPGKL 458


>gi|34500000|gb|AAQ73582.1| ATP synthase beta subunit [Mannheimia haemolytica]
          Length = 444

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGSSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 ANSTXLLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KRLVARARKIERFLSQP 401


>gi|4206568|gb|AAD11715.1| ATP synthase beta subunit [Dictamnus sp. M.W.Chase-1820K]
          Length = 473

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 8   GHIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTSLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|21675043|ref|NP_663108.1| F0F1 ATP synthase subunit beta [Chlorobium tepidum TLS]
 gi|25452812|sp|Q8KAC9|ATPB2_CHLTE RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|21648279|gb|AAM73450.1| ATP synthase F1, beta subunit [Chlorobium tepidum TLS]
          Length = 462

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 193/428 (45%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +    ++   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKL--VLETQQHLGEERVRTIAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G    + G+  ++       GR++N +G PIDG   +     +  I    P 
Sbjct: 59  EGTDGLVRGMSAVNTGKPIQVPVGGEVLGRMLNVVGDPIDGKGPV-PAKKTYSIHRAAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVI 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         +
Sbjct: 118 FDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   + +    + K+ +V    +E P  R    LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFREEEG 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI  +  +KG++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRI--TSTKKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  ++ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYNTAQAVKQILQRYKDLQDIIAILGMDELSDED-KLVVARARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|152965236|ref|YP_001361020.1| F0F1 ATP synthase subunit alpha [Kineococcus radiotolerans
           SRS30216]
 gi|189081303|sp|A6W7G7|ATPA_KINRD RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|151359753|gb|ABS02756.1| ATP synthase F1, alpha subunit [Kineococcus radiotolerans SRS30216]
          Length = 552

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 98/447 (21%), Positives = 177/447 (39%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L      Y      +   G ++        V  L   V   + +  Q      LG   
Sbjct: 13  DALDAFVASYDPGTAAREEVGRVTDAGDGIAHVEGL-PSVMANELLRFQDG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    +     + GRV++ LG PIDG   + + 
Sbjct: 69  NLDVRDIGVVVLGDYAGIEEGQEVHRTGEVLSVPVGDNFLGRVVDPLGAPIDGLGPI-EA 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +    +  + P  M RQ V +  +TGI+ ID   P+  GQR  +      GK      T+
Sbjct: 128 ETRRALELQAPSVMQRQEVREPLQTGIKAIDAMIPVGRGQRQLIIGDRQTGKSAIAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           ++  A  +  D     + I   +G++G  +               + +V A + +    +
Sbjct: 188 INQKANWESGDPKQQVRCIYVAIGQKGSTIAAVRRSLEEAGAMEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T  +I +++   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSSIGQHWMYGGKHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +   G++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGGGSMTGLPFIETKGNDVSAYIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A +   K +  +L   + +F   R +     +   +D      + +
Sbjct: 368 AIDVGISVSRVGGAAQTKAIKGISGTLKLDLAQF---RAMEAFAMFASDLDQASRNQLAR 424

Query: 410 VPIIYDFLKQSP-SDLSSEDVFQEITK 435
              + + LKQ   +  S E+    I  
Sbjct: 425 GARLVELLKQPQYTPFSLEEQVVSIWA 451


>gi|322835102|ref|YP_004215129.1| ATP synthase F1 subunit beta [Rahnella sp. Y9602]
 gi|321170303|gb|ADW76002.1| ATP synthase F1, beta subunit [Rahnella sp. Y9602]
          Length = 460

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 189/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  +   S  + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPNVYNALEVENGTSKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG+PID   ++G+ +    I    P    
Sbjct: 61  DGLRRGLKVNNLEHPIEVPVGKATLGRIMNVLGEPIDMKGAIGEEE-RRAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LANSQELLETGIKVMDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGALQERI--TSTKSGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVSRARKIQRFLSQP 404


>gi|257471130|ref|ZP_05635129.1| flagellum-specific ATP synthase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|311085818|gb|ADP65900.1| flagellum-specific ATP synthase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 453

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 155/449 (34%), Positives = 244/449 (54%), Gaps = 21/449 (4%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDN 58
           KN+ +     E  S   ++  G + SI  +   V  L+    +G   + +    GKN++ 
Sbjct: 10  KNISSFESRIEKLSD--IINYGRLVSINGLILEVVGLNT--SIGSECLIERTIDGKNANI 65

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------RISPSACWCGRVINAL 109
             +VI  + +  ++        I  G  VF   +          ++       GRV++  
Sbjct: 66  NAEVIGFSGEKTFLLSFEDIHGIFPGARVFS--KIASNSNFFIKKLPLGMELLGRVLDGR 123

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    +        I +     +NR  + +   TGIR I+    +  GQ+IG+F+ 
Sbjct: 124 GQPLDQLPKID-HKYYSTIKNYSINPLNRTPITEVLDTGIRAINGLLTIGRGQKIGIFSS 182

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
           SGIGKS LL M AR    D ++I+L+GERGREV++FIE+ LG   L +SV++ A +D SP
Sbjct: 183 SGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVIIAAPADVSP 242

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +L+  A   A  IAEYF     +VLLI+DS+TR+A + REI+ + GELPV++GYP+S+FS
Sbjct: 243 LLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSKGYPSSIFS 302

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           ++P L+ER G   K KG+IT+  +VL +G++  DP++   RS+LDGHI+L+R  A+ G Y
Sbjct: 303 KIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSRYYADLGHY 362

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  +S+SR+     +A +         L+  ++  RD+  IG Y  G D+ILD A+ 
Sbjct: 363 PAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTDVILDHAIK 422

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             P +  FL+Q  S+ S      E   K+
Sbjct: 423 IWPKLEKFLQQEISEKSDYLFSCEALNKI 451


>gi|170178363|gb|ACB10601.1| ATP synthase beta subunit [Cornus unalaschkensis]
          Length = 455

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEDD-RLTVARARKIERFLSQP 395


>gi|55957070|emb|CAB64876.2| ATP synthase beta subunit [Cyrtandra hawaiensis]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+N   +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLNVAFPPGKMPNIYNALVVKGRN--TVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMDVIDTEAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6687282|emb|CAB64900.1| ATP synthase beta subunit [Cornus officinalis]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLIVARARKIERFLSQP 434


>gi|319795604|ref|YP_004157244.1| type III secretion apparatus h+-transporting two-sector atpase
           [Variovorax paradoxus EPS]
 gi|315598067|gb|ADU39133.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Variovorax paradoxus EPS]
          Length = 457

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 164/418 (39%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEIS 82
           G +S         T +  +V  G+ V          L +V+    +   + P+G    IS
Sbjct: 38  GRVSKAVGTLIDATGIQAHV--GELVELVTPGEPPLLAEVVGFRGNTAVLTPLGPITGIS 95

Query: 83  -LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            L ++V   G       +   GRV++A+G+PIDG   L        +  +    + R+ +
Sbjct: 96  ALTEVVPTGGGHSCPVGSQLLGRVLDAMGQPIDGRGGLAAA-ARQPVHREPVNPLARRMI 154

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           +    TGIR ID    L  GQRIGVF+  G+GKSTLL M AR    D  +I+L+GERGRE
Sbjct: 155 DAPLPTGIRAIDALLTLGEGQRIGVFSPPGVGKSTLLGMLARGSSADVNVIALIGERGRE 214

Query: 202 VREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V+EFI      + + KSV+VV+TS+  P+ R  +   A TIAEYF  +G  VLL++DS++
Sbjct: 215 VKEFIEHSLGPEGMAKSVIVVSTSERPPMERIKSAHVATTIAEYFRDQGKKVLLLMDSLS 274

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REI   SGE P  R YP S+FS LP+LLER G  E   G+ITA+ SVL +GD  
Sbjct: 275 RFARAQREIGLASGEPPTRRSYPPSIFSMLPQLLERAGQGES--GSITAIYSVLTEGDEE 332

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           NDPIA+ VRSILDGH+VL+R LA   RYP +D LAS+SR+         +   + L  L+
Sbjct: 333 NDPIAEEVRSILDGHVVLSRKLAAANRYPAIDVLASISRVMPLVTDPAHRAAAAHLRELL 392

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +++E   +  IG Y+PG D   D AV   P I +FL Q+P        + +    L 
Sbjct: 393 SKYQEMELLVQIGEYKPGGDAQADAAVRARPAILEFLAQAPG---QSVPYAQTLAALH 447


>gi|325981216|ref|YP_004293618.1| ATP synthase F1, beta subunit [Nitrosomonas sp. AL212]
 gi|325530735|gb|ADZ25456.1| ATP synthase F1, beta subunit [Nitrosomonas sp. AL212]
          Length = 459

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 105/362 (29%), Positives = 173/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G +V + G+   +       GR+++ LG+PID    +G  +
Sbjct: 45  LGDGVVRTIALGSSDGLRRGMIVQNSGKQINVPVGTKTLGRIMDVLGRPIDEMGDIG-AE 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I  + P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 104 QHMSIHREAPAFDELAASTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +     +  K  +V    +E P  R    LT +
Sbjct: 164 NIAIEHSGYSVFAGVGERTREGNDFYHEMKESKVLDKVALVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 224 TMAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 281

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 282 TSTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSR 341

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +      ++   + R++E RDI  I G           AV +   I  FL 
Sbjct: 342 QLDPQVVGEEHYNTARAVQQTLQRYKELRDIIAILGMDELS-PEDKLAVSRARKIQRFLS 400

Query: 419 QS 420
           Q 
Sbjct: 401 QP 402


>gi|183206576|gb|ACC54486.1| ATP synthase beta subunit [Campanula rumeliana]
          Length = 475

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 118/421 (28%), Positives = 184/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  DNLGQ I +  ++        V   
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPYIYNALVV---KGRDNLGQPINVTCEVQQLLGNNRVRAV 59

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 60  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 118

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 119 PAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 178

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 179 SVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTM 238

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 239 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 296

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 297 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 356

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                 S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 357 LQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQ 415

Query: 420 S 420
            
Sbjct: 416 P 416


>gi|118917360|dbj|BAF40468.1| ATP synthase beta subunit [Fontainea venosa]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|110456744|gb|ABG74839.1| ATPase beta subunit [Menodora longiflora]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V QG+++     +   +V ++  D  V    + 
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIFNALVVQGRDTVGPGINVTCEVQQLLGDNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 81  ATEGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVDTCTTS-PIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGPEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|113910756|gb|ABI48110.1| ATPase beta subunit [Targionia hypophylla]
          Length = 456

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGGPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPV-EATTTFPIHRSAPAFTQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|90578414|ref|ZP_01234225.1| ATP synthase subunit A [Vibrio angustum S14]
 gi|90441500|gb|EAS66680.1| ATP synthase subunit A [Vibrio angustum S14]
          Length = 513

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 99/443 (22%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   ++ L                 G I S++     +  L+  V  G+ +      
Sbjct: 1   MQLNSNEISDLIRQRIATFNVTSQARNEGTIVSVSDGIIVINGLAD-VMQGEMIELP--- 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +    V    +G   +++ G  V   GR  ++       GRV+N LG+PID
Sbjct: 57  DNRYALALNLERHSVGAVVMGPYADLAEGMKVTGTGRILQVPVGKGLLGRVVNTLGQPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  ++   D    +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGAID-NDGFAPVEIIAPGVIDRKSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
           + +   ++  + D     +   +G++   +   +     +   K ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQKDSGIYSVYVAIGQKASTIANVVRKLEENGALKNTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNANYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 QTNLFNAGLRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D    K +     + + +KQ  
Sbjct: 413 LDDATRKQLDHGEKVTELMKQKQ 435


>gi|19033087|gb|AAL83528.1|AF408800_1 ATP synthase beta subunit [Mougeotia sp. UTEX LB 758]
          Length = 402

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 167/370 (45%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVN-NK 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFAGVGERTREGNDLYIEMKESKVINEENIGESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  ++  ++   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGTEHYEIAQAVKETLQRYKELQDIIAILGLDELSEED-RLVVARA 357

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 358 RKVERFLSQP 367


>gi|20467409|gb|AAL27835.1| ATPase beta subunit [Araucaria araucana]
          Length = 452

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ +  GQ+I++  ++        V    +   + +  G  VF  G    +   A   GR
Sbjct: 21  KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 80

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P           F+TGI+V+D+  P   G +I
Sbjct: 81  IFNVLGEPVDDLGPVN-ARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKI 139

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         + S VGER RE  +   +             
Sbjct: 140 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNIS 199

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 200 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 259

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 260 LGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 317

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 318 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 377

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 378 ILGLDELSEED-RLTVARARKIERFLSQP 405


>gi|77920721|ref|YP_358536.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380]
 gi|118573500|sp|Q39ZU1|ATPB3_PELCD RecName: Full=ATP synthase subunit beta 3; AltName: Full=ATP
           synthase F1 sector subunit beta 3; AltName:
           Full=F-ATPase subunit beta 3
 gi|77546804|gb|ABA90366.1| ATP synthase F1 subcomplex beta subunit [Pelobacter carbinolicus
           DSM 2380]
          Length = 468

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 199/420 (47%), Gaps = 30/420 (7%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV------------CLGDFVVHQGKNSDNLGQV-IRINL 67
           +  G I+ +      V   +  +             LGD      +  + + +V   +  
Sbjct: 1   MSNGKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGD------EPWNLVAEVAQHLGE 54

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V + GR   +       GR++N +G+P+D    + + D + 
Sbjct: 55  NTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPV-ETDTTW 113

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           EI    P  +++    + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 114 EIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIHNIA 173

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  + + VGER RE  +   +    N+  K+ +V    +E P  R    L+A+T+A
Sbjct: 174 KKHGGFSVFAGVGERTREGNDLWNEMKESNVLDKTALVYGQMNEPPGARARVALSALTVA 233

Query: 243 EYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 234 EYFRDQENQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGELQERI--TT 291

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ 
Sbjct: 292 TKHGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSSSRIL 351

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      +  ++   + +++ R+++ +DI  I G     +    + V +   I  FL Q 
Sbjct: 352 DPQVLGEEHYQVARDVQYVLQRYKDLQDIIAILGMDELSEED-KQTVSRARKIQRFLSQP 410


>gi|62085161|gb|AAX62985.1| ATP synthase beta subunit [Micrantheum hexandrum]
          Length = 488

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/424 (26%), Positives = 185/424 (43%), Gaps = 30/424 (7%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------V 70
              G I  I      V      +       V+ +G+NS   GQ I +  ++        V
Sbjct: 10  TNQGRIVQIIGPVLDVAFPRGKMPNIYNALVIVKGRNST--GQQINVTCEVQQLLGNNRV 67

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I 
Sbjct: 68  RTVAMSATEGLMRGMEVIDTGGPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIH 126

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
              P  +      + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   + 
Sbjct: 127 RSAPAFIQLDTKLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKEY 186

Query: 190 VIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTA 238
             +S+ G   ER RE  +  ++               K  +V    +E P  R    LTA
Sbjct: 187 GGVSVFGGVGERTREGNDLYKEMKQSRVINEENIAESKVALVYGQMNEPPGARMRVGLTA 246

Query: 239 VTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 247 LTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI 306

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S 
Sbjct: 307 --TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAVKGIYPAVDPLDST 364

Query: 358 SRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           S +        +  +   S+   + R++E +DI  I G     +      V +   I  F
Sbjct: 365 STMLQPNIVGKEHYETAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERF 423

Query: 417 LKQS 420
           L Q 
Sbjct: 424 LSQP 427


>gi|67523719|ref|XP_659919.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
 gi|40745270|gb|EAA64426.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor
           [Aspergillus nidulans FGSC A4]
          Length = 513

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/431 (25%), Positives = 185/431 (42%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
             GG I  +      V    + +  + + +  +      + +V   +  ++V    +   
Sbjct: 41  AAGGKIHQVIGAVVDVKFEGEKLPAILNAIETENNGQKLVLEVSQHLGENVVRTIAMDGT 100

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G      G    I       GR++N  G PID    + K      I ++ P    
Sbjct: 101 EGLTRGAPARDTGAPITIPVGPGTLGRIVNVTGDPIDERGPI-KATKYAPIHAEAPEFTE 159

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   
Sbjct: 160 QSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG 219

Query: 195 VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           VGER RE  +   +         D   K  +V    +E P  R    LT +TIAEYF  +
Sbjct: 220 VGERTREGNDLYHEMQETGVIQLDGESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDE 279

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +   KG+I
Sbjct: 280 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSI 337

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     
Sbjct: 338 TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVG 397

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +     + +  ++  ++  +DI  I G     +      V +   +  FL Q     + 
Sbjct: 398 EEHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLERFLSQP---FTV 453

Query: 427 EDVFQEITKKL 437
             VF  I  KL
Sbjct: 454 AQVFTGIEGKL 464


>gi|225712758|gb|ACO12225.1| ATP synthase subunit beta, mitochondrial precursor [Lepeophtheirus
           salmonis]
          Length = 505

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 186/418 (44%), Gaps = 18/418 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPV 75
             +    G + ++      V        + + +  + +    + +V   +  + V    +
Sbjct: 28  SAVSAANGQVVAVIGAVVDVQFDDSLPEILNALRVENREPKLILEVAQHLGENTVRCIAM 87

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   +I       GR+IN +G PID    +        I ++ PP
Sbjct: 88  DGTEGLVRGQKVLDTGSPIKIPVGEETLGRIINVIGDPIDERGPVN-SKSKASIHAEAPP 146

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                  ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 147 FSEMSVQQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSV 206

Query: 192 ISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
            + VGER RE  +   + +        D   K  +V    +E P  R    LT +T+AEY
Sbjct: 207 FAGVGERTREGNDLYHEMIEGGVISLKDKSSKVALVYGQMNEPPGARARVALTGLTVAEY 266

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   
Sbjct: 267 FRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTT 324

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D 
Sbjct: 325 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDP 384

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               A+  ++  ++  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 385 NVIGAEHYQIARNIQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 441


>gi|61968319|gb|AAX57086.1| ATP synthase beta subunit [Spondianthus preussii]
          Length = 479

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 422


>gi|287945|emb|CAA50332.1| ATP synthase beta subunit [Drosophila melanogaster]
          Length = 500

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 117/454 (25%), Positives = 201/454 (44%), Gaps = 25/454 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           +  L  L QL+  ++           G I ++      V        + + +    ++  
Sbjct: 7   KNLLPFLGQLSRSHAAKAAKAAAAANGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPR 66

Query: 58  NLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
            + +V   +  + V    +   E +  G  V   G   RI   A   GR+IN +G+PID 
Sbjct: 67  LVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDE 126

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D +  I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+
Sbjct: 127 RGPID-TDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 185

Query: 176 TLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSD 225
            L+     +         + + VGER RE  +   + +        D   K  +V    +
Sbjct: 186 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMN 245

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 246 EPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 305

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE
Sbjct: 306 TLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAE 363

Query: 345 EGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G     +   
Sbjct: 364 LGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED- 422

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              V +   I  FL Q        +VF     KL
Sbjct: 423 KLTVARARKIQRFLSQP---FQVAEVFTGHAGKL 453


>gi|6017808|gb|AAF01638.1| ATP synthase beta subunit [Menispermum canadense]
          Length = 490

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRVAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSSTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62902869|gb|AAY19349.1| ATP synthase beta subunit [Lagenaria breviflora]
 gi|66276283|gb|AAY44156.1| ATP synthase beta subunit [Lagenaria breviflora]
          Length = 488

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTAGQEINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVVDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|148654681|ref|YP_001274886.1| F0F1 ATP synthase subunit beta [Roseiflexus sp. RS-1]
 gi|166222410|sp|A5UQN3|ATPB_ROSS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148566791|gb|ABQ88936.1| ATP synthase F1, beta subunit [Roseiflexus sp. RS-1]
          Length = 471

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 189/414 (45%), Gaps = 19/414 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
             G ++ I  V                   +        + +V + +   +V    +   
Sbjct: 4   ATGVVTDIIGVVLNAKFPEDQTPEIYNALEIRLENGKRLVAEVQQQLGGGVVKAVAMSST 63

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      GR   +       GRV + LG PIDG+  +   +    I    P   +
Sbjct: 64  DGMRRGVKAIDTGRPIAVPVGPGTLGRVFDVLGDPIDGEGPVQATEYR-PIHRPPPALED 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G + G+F G+G+GK+ ++     +   ++    + + 
Sbjct: 123 QSTTAQIFETGIKVIDLIAPFTRGGKTGIFGGAGVGKTVVIQELIANVAKEQSGFSVFAG 182

Query: 195 VGERGREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           VGER RE  + I +              K+V+V    +E P  R    LTA+T+AEYF  
Sbjct: 183 VGERSREGNDLIHEMKEARIDEQTRVFDKTVMVFGQMNEPPGARLRVALTAMTMAEYFRD 242

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I RF  +  E++   G +P   GY  ++ +E+  L ERI  +  +KG+I
Sbjct: 243 EGRDVLLFIDNIFRFVQAGSEVSALLGRMPSQVGYQPTLGTEMGELQERI--TSTKKGSI 300

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D++ DP   +V S LD  I L RS+A +G YP VDPLAS SR+ D     
Sbjct: 301 TSMQAVYVPADDYTDPAPATVFSHLDATITLERSIAAKGIYPAVDPLASTSRILDPNIVG 360

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +  ++ R+++ +DI  I G     D      V +   I  F  Q 
Sbjct: 361 AEHYRVAREVQRVLQRYKDLQDIIAILGVEELSDDD-KLTVARARKIERFFSQP 413


>gi|5758859|gb|AAD50833.1| ATP synthase beta subunit [Calectasia intermedia]
          Length = 496

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V    + +       VV   K  D LGQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVVFPPEKMPNIYNALVV---KGRDTLGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V        +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|57868956|gb|AAW57474.1| ATP synthase beta subunit [Bruinsmia styracoides]
          Length = 492

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/386 (27%), Positives = 173/386 (44%), Gaps = 26/386 (6%)

Query: 57  DNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           D  GQ I +  ++        V    +   + ++ G  V + G    +       GR+ N
Sbjct: 48  DTGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGRIFN 107

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F
Sbjct: 108 VLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 166

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKK 216
            G+G+GK+ L+     +       +S+ G   ER RE  +  ++               K
Sbjct: 167 GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIAESK 226

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++   G 
Sbjct: 227 VALVYGQMNEPPGARMRVGLTALTMAEYFRDVNAQNVLLFIDNIFRFVQAGSEVSALLGR 286

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD  
Sbjct: 287 MPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDAT 344

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R LA +G YP VDPL S S +       +   +    +   + R++E +DI  I G
Sbjct: 345 TVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYETAQRVKQTLQRYKELQDIIAILG 404

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      V +   I  FL Q 
Sbjct: 405 LDELSEED-RLTVARARKIERFLSQP 429


>gi|323483073|ref|ZP_08088466.1| ATP synthase subunit alpha [Clostridium symbiosum WAL-14163]
 gi|323403613|gb|EGA95918.1| ATP synthase subunit alpha [Clostridium symbiosum WAL-14163]
          Length = 500

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/429 (24%), Positives = 176/429 (41%), Gaps = 15/429 (3%)

Query: 5   LETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  E+Y      Q  G + S+      +  +  +   G+ +  +       G V 
Sbjct: 7   ISILKEEIENYDDICKEQETGTVISVGDGIARIYGM-DHAMYGEVITFECG---LKGMVQ 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  D +     G   EI  G      G+   +       GRVI+ALG PIDG   + K 
Sbjct: 63  DIRQDSIGCILFGKDTEIGEGTRASRTGKKAGVPVGDACIGRVIDALGAPIDGKGEI-KT 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  + P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++ +   
Sbjct: 122 DDYRPVEEEAPGIIDRQAVNQPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIATDTI 181

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   + + +  +      + + V+ +T+ +   L+ +AP    
Sbjct: 182 LNQKGKGVICIYVAIGQKASTIAKLVSTFEKYGALEYTTVMASTASDCAPLQYIAPYAGT 241

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER   
Sbjct: 242 ALAEYFMHKGKDVLIVYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLERSSR 301

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 302 LSSALGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSV 361

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK   S+   + ++ E     +   +   +D    + +     + + L
Sbjct: 362 SRVGGAAQFKAMKKASGSIRIDLAQYREME---VFTQFSSDLDAATKEQLQYGKSLMELL 418

Query: 418 KQSPSDLSS 426
           KQ      S
Sbjct: 419 KQPLYHPLS 427


>gi|224830506|gb|ACN66348.1| ATP synthase beta chain [Cissampelos capensis]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D LGQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|183206680|gb|ACC54538.1| ATP synthase beta subunit [Campanula hawkinsiana]
          Length = 463

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|197132384|gb|ACH47710.1| ATP synthase CF1 beta subunit [Pelargonium cotyledonis]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V      +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPRGKMPYIYNALVVQG--RDTVGQEIHVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQKVSESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDQHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|187775646|ref|ZP_02797343.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188024746|ref|ZP_02773677.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189404737|ref|ZP_02810590.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC869]
 gi|189405700|ref|ZP_02823671.2| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC508]
 gi|193070354|ref|ZP_03051296.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E110019]
 gi|187771370|gb|EDU35214.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188016937|gb|EDU55059.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189374706|gb|EDU93122.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC869]
 gi|189378721|gb|EDU97137.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC508]
 gi|192956293|gb|EDV86754.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E110019]
          Length = 438

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 156/409 (38%), Positives = 230/409 (56%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I +I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 25  RYEGKIINIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 80

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P++ + +         + ++ P  + RQ
Sbjct: 81  MYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPMESNIAAPYLPFERSLYAEPPDPLLRQ 140

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 141 VIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 200

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 201 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSV 260

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 261 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 318

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 319 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 378

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+    +I +F++QS  D+SS +
Sbjct: 379 IATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYE 427


>gi|139439330|ref|ZP_01772772.1| Hypothetical protein COLAER_01788 [Collinsella aerofaciens ATCC
           25986]
 gi|133775354|gb|EBA39174.1| Hypothetical protein COLAER_01788 [Collinsella aerofaciens ATCC
           25986]
          Length = 532

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 176/439 (40%), Gaps = 28/439 (6%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNL 59
           +K  E L  L+     + V     +  +      V+ L +    G+ +  +         
Sbjct: 12  KKLQEQLTSLSATVDTHEVS---TVDEVGDGIARVSGL-KSAMAGELLEFKSSDTGETVF 67

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G    ++ D V     G  + I  GD     GR   I  S    GRV+N LG+PIDG   
Sbjct: 68  GLAQNLDRDEVGAVLFGAVDSIKEGDECRTTGRVMDIPVSRAMLGRVVNPLGQPIDGLGD 127

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        I  K P  ++R  V +  +TG+  ID   P+  GQR  +      GK+ + 
Sbjct: 128 IVAT-HRRPIEFKAPGVIDRTPVCEPVQTGLLAIDSMVPIGRGQRELIIGDRKTGKTAIA 186

Query: 179 SMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
                +        I   +G++   V    E          +++V AT+ +S  ++ +AP
Sbjct: 187 IDAILNQRGKGMVCIYVAIGQKASTVANIRETLAQHGALDYTIIVSATAADSAPMQYIAP 246

Query: 236 LTAVTIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +    I E+F   G+            +VL+I D +++ A + R+++      P    YP
Sbjct: 247 MAGAAIGEFFMYNGEDGKPASETNPGGHVLVIYDDLSKQAVAYRQMSLTLHRPPGREAYP 306

Query: 284 TSVFSELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             +F    RLLER     K+ G   +TA+  +     + +  I  +V SI DG I L   
Sbjct: 307 GDIFYLHSRLLERAVKMSKKNGYGSMTALPIIETQDGDVSAYIPTNVISITDGQIYLQSE 366

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G+ P VD   SVSR+   A +   K++  +L   +  +   +++     +   +D 
Sbjct: 367 LFFQGQRPAVDVGISVSRVGGDAQTKAMKQVAGNLRLDLASY---QELAGFTQFGSDLDE 423

Query: 402 ILDKAVHQVPIIYDFLKQS 420
              K +     + + LKQ 
Sbjct: 424 ATQKQLTHGARMTELLKQP 442


>gi|118917414|dbj|BAF40522.1| ATP synthase beta subunit [Dovyalis macrocalyx]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|32815659|gb|AAP88226.1| ATP synthase beta subunit [Castanea seguinii]
 gi|32815661|gb|AAP88227.1| ATP synthase beta subunit [Castanopsis tibetana]
          Length = 457

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|62902845|gb|AAY19337.1| ATP synthase beta subunit [Tripterococcus brunonis]
          Length = 488

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGQTINVICEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLETKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|157371190|ref|YP_001479179.1| flagellum-specific ATP synthase [Serratia proteamaculans 568]
 gi|157322954|gb|ABV42051.1| ATPase, FliI/YscN family [Serratia proteamaculans 568]
          Length = 453

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 156/446 (34%), Positives = 243/446 (54%), Gaps = 17/446 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           +L+TL +      K  V + G ++  T +    T L   + +G   + +    G+  +  
Sbjct: 11  SLDTLEKRITHAPK--VRRYGRLTRATGLVLEATGL--QLPIGATCLIERHDGGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFH-------WGRFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+            ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARVSPEGQSASKQLPLGPALLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPETG-YRAPLITAPFNPLQRTPIEQVLDVGVRTINGLLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAEAGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +  + V +   ++  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDEEHYRRVRNFKQMLASYQRNRDLISVGAYVSGSDPLLDKAMALYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  +L+Q   + S  D   +  ++L
Sbjct: 426 QMEAYLQQGIFERSGYDDACQQLQQL 451


>gi|63091961|emb|CAH58838.1| ATP synthase alpha chain [Enterococcus phoeniculicola]
          Length = 367

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 99/375 (26%), Positives = 154/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGLDNAMS-GELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGESLIGRVVNPLGQPIDGLGEI-KTDKTRPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQNMICIYVAIGQKDSTVRAQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + E   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGALDYTIVVTAGASEPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|14718248|gb|AAK72862.1| ATP synthase beta subunit [Tetracarpaea tasmanica]
          Length = 483

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V         + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GQITQIIGPVLDVAFSPGNMPNINNXLVVKG--RDTTGQEINVTCEVQQLLGNNRVRAIA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 427


>gi|7708294|emb|CAB90076.1| ATP synthase beta subunit [Elaeagnus sp. Chase 2414]
          Length = 469

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DN GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 48  KGRDNXGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K        +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVAXXYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|148223359|ref|NP_001080126.1| mitochondrial ATP synthase beta subunit [Xenopus laevis]
 gi|28436792|gb|AAH46741.1| Atp5b protein [Xenopus laevis]
          Length = 525

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/431 (25%), Positives = 194/431 (45%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+++  + +V   +  + V    +   E
Sbjct: 55  TASGRIVAVIGAVVDVQFDEDLPPILNALEVQGRDTRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    +     +  I ++ P  +  
Sbjct: 115 GLVRGQKVLDAGTPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 412 LEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 467

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 468 AEVFTGHLGKL 478


>gi|323715438|gb|ADY04787.1| ATP synthase beta subunit [Davidia involucrata]
          Length = 452

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 17  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEDD-RLTVARARKIERFLSQP 401


>gi|323691481|ref|ZP_08105752.1| ATP synthase subunit alpha [Clostridium symbiosum WAL-14673]
 gi|323504454|gb|EGB20245.1| ATP synthase subunit alpha [Clostridium symbiosum WAL-14673]
          Length = 500

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 103/429 (24%), Positives = 176/429 (41%), Gaps = 15/429 (3%)

Query: 5   LETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  E+Y      Q  G + S+      +  +  +   G+ +  +       G V 
Sbjct: 7   ISILKEEIENYDDICKEQETGTVISVGDGIARIYGM-DHAMYGEVITFECG---LKGMVQ 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  D +     G   EI  G      G+   +       GRVI+ALG PIDG   + K 
Sbjct: 63  DIRQDSIGCILFGKDTEIGEGTRASRTGKKAGVPVGDACIGRVIDALGAPIDGKGEI-KT 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  + P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++ +   
Sbjct: 122 DDYRPVEEEAPGIIDRQAVNQPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIATDTI 181

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   + + +  +      + + V+ +T+ +   L+ +AP    
Sbjct: 182 LNQKGKGVICIYVAIGQKASTIAKLVSTFEKYGALEYTTVMASTASDCAPLQYIAPYAGT 241

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++   G  P    YP  VF    RLLER   
Sbjct: 242 ALAEYFMHKGKDVLIVYDDLSKHAVAYRALSLLLGRSPGREAYPGDVFYLHSRLLERSSR 301

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 302 LSSALGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFFSGMRPAVNVGLSV 361

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A     KK   S+   + ++ E     +   +   +D    + +     + + L
Sbjct: 362 SRVGGAAQFKAMKKASGSIRIDLAQYREME---VFTQFSSDLDAATKEQLQYGKSLMELL 418

Query: 418 KQSPSDLSS 426
           KQ      S
Sbjct: 419 KQPLYHPLS 427


>gi|261840095|gb|ACX99860.1| flagellum-specific ATP synthase [Helicobacter pylori 52]
          Length = 434

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 158/424 (37%), Positives = 232/424 (54%), Gaps = 7/424 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   ++ +G V+    +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID    L    L+  +++     
Sbjct: 73  FIEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEIT 434
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ 
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLVQDENALQPFEQSFQQLE 430

Query: 435 KKLQ 438
           + L+
Sbjct: 431 EILR 434


>gi|124361802|gb|ABN09343.1| ATP synthase beta subunit [Argania spinosa]
          Length = 465

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGKPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 414


>gi|113910888|gb|ABI48176.1| ATPase beta subunit [Fontinalis antipyretica var. gigantea]
          Length = 472

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMPVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAT-TTFPIHRPAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|24940246|emb|CAD43397.1| ATP synthase beta subunit [Nemophila insignis]
          Length = 475

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 3   GRIVQIIGPVLDVAFPPGEMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|5758889|gb|AAD50863.1| ATP synthase beta subunit [Heliconia rostrata]
          Length = 496

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|316931855|ref|YP_004106837.1| ATP synthase F1 subunit beta [Rhodopseudomonas palustris DX-1]
 gi|315599569|gb|ADU42104.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris DX-1]
          Length = 476

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +  ++  + +V   +    V    +   E 
Sbjct: 7   QTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    + K +    I  + P   ++ 
Sbjct: 67  LVRGQEVTDTGAPISVPVGDGTLGRIMNVIGEPVDEQGPI-KSEGLRAIHQEAPAYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    LT +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+   +   +
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSASIVGE 363

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E       +  ++ +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 EHYTTARMVQQILQKYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQP 415


>gi|183206542|gb|ACC54469.1| ATP synthase beta subunit [Campanula edulis]
          Length = 466

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQNFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|110915708|gb|ABH02642.1| ATP synthase beta subunit [Vahlodea atropurpurea]
          Length = 490

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|124361722|gb|ABN09303.1| ATP synthase beta subunit [Diospyros pilosula]
          Length = 463

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|118917324|dbj|BAF40445.1| ATP synthase beta subunit [Adriana quadripartita]
          Length = 482

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVTFPPGKMPNIYNALVIKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|113910948|gb|ABI48206.1| ATPase beta subunit [Araucaria araucana]
          Length = 456

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ +  GQ+I++  ++        V    +   + +  G  VF  G    +   A   GR
Sbjct: 12  KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P           F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDDLGPVN-ARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         + S VGER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 IPGLDELSEED-RLTVARARKIERFLSQP 396


>gi|113910872|gb|ABI48168.1| ATPase beta subunit [Mnium hornum]
          Length = 472

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVEGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG F G+G+GK+  +     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVPIMELINNIAKAHGGVSVS 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V   ++E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQTNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 SRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|20269426|gb|AAM17940.1| ATP synthase beta subunit [Monotheca buxifolia]
          Length = 448

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +G+ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 15  KGRDTVGKPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 74

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 75  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 133

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 134 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 193

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 194 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 253

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 254 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 311

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 312 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 371

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 372 ILGLDELSEDD-RLIVARARKIERFLSQP 399


>gi|5758878|gb|AAD50852.1| ATP synthase beta subunit [Ensete ventricosum]
          Length = 496

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVT 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|74151565|dbj|BAE38888.1| unnamed protein product [Mus musculus]
 gi|74189077|dbj|BAE39301.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGRMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|83746948|ref|ZP_00943994.1| ATP synthase beta chain [Ralstonia solanacearum UW551]
 gi|300702513|ref|YP_003744113.1| ATP synthase, f1 sector subunit beta [Ralstonia solanacearum
           CFBP2957]
 gi|83726368|gb|EAP73500.1| ATP synthase beta chain [Ralstonia solanacearum UW551]
 gi|299070174|emb|CBJ41465.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum
           CFBP2957]
          Length = 469

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+PID    +   +
Sbjct: 55  LGDGVVRTIALGSSDGLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIACEE 114

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 115 KRG-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 173

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 174 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 233

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 234 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 291

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 292 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 351

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           +V +   I  FL 
Sbjct: 352 QLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILGMDELS-PEDKLSVGRARKIQRFLS 410

Query: 419 QS 420
           Q 
Sbjct: 411 QP 412


>gi|156530157|gb|ABU75175.1| AtpB [Picrasma crenata]
          Length = 484

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|12004129|gb|AAG43904.1|AF213773_1 ATP synthase beta subunit [Cyclamen hederifolium]
          Length = 482

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGSALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIGESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLPVARARKIERFLSQP 434


>gi|264676597|ref|YP_003276503.1| flagellar protein export ATPase FliI [Comamonas testosteroni CNB-2]
 gi|262207109|gb|ACY31207.1| flagellar protein export ATPase FliI [Comamonas testosteroni CNB-2]
          Length = 462

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 160/463 (34%), Positives = 249/463 (53%), Gaps = 28/463 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDN 58
           M    + ++Q    Y++ + ++  G ++ +T +    + L   V +G    +HQ      
Sbjct: 1   MNPWQQFMSQARARYAEPVPLECQGRLTRLTGMVLEASGL--RVPVGAQCHIHQHGQEPV 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---------------------WGRFRISP 97
           L +V+    +  ++ P G  + +S G +V                        G  R+  
Sbjct: 59  LAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVVETEKVSQTVGVLRLPM 118

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
                GRV+++ G P+D    LG   +   +      AM+R  V +   TG++ ++    
Sbjct: 119 GDGLLGRVVDSQGTPLDHAGELGSV-VPEVLDRNPINAMDRDPVRESLDTGVKALNALLT 177

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKK 216
           +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED LG  +  +
Sbjct: 178 VGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGAQDRSR 237

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + REIA   GE 
Sbjct: 238 AVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEP 297

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGH+
Sbjct: 298 PATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADAARAILDGHV 357

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R+LAE G YP +D   S SR+     S +  +L      +  R+++ RD+  +G Y 
Sbjct: 358 VLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKGRDLVQVGAYV 417

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           PG D  LD+A+   P +  FL+QS  + SS E     + + +Q
Sbjct: 418 PGSDPQLDEAIALQPAMTGFLQQSMFESSSMEQSLAGMAQAMQ 460


>gi|257852924|gb|ACV71473.1| ATP synthase beta subunit [Erythrospermum phytolaccoides]
          Length = 488

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|183206640|gb|ACC54518.1| ATP synthase beta subunit [Wahlenbergia linifolia]
          Length = 470

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 3   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+ ID    +  G  S  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGETIDNLGPVDTGTTS-PIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|197132370|gb|ACH47703.1| ATP synthase CF1 beta subunit [Erodium chrysanthum]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V QG   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPKGKMPYIYNALVVQG--RDPAGQQIHVTCEVQQLLGNNRVRAIA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLMRGMEVIDLGAPLSVPVGGATLGRIFNVLGEPVDSLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 138 DFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFAGVGERTREGNDLYKEMKESGVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|124361626|gb|ABN09255.1| ATP synthase beta subunit [Diospyros castanea]
          Length = 454

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|15425578|emb|CAC60250.1| ATP synthase beta subunit [Nephrophyllidium crista-galli]
          Length = 479

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G IS I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GRISQIIGPVLDVAFPPGKMPNIYNALVVKGRDTADQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D        +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGDEHYDTAQMVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|12004165|gb|AAG43922.1|AF213791_1 ATP synthase beta subunit [Soldanella montana]
          Length = 487

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTSGQPINVTCEVXQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLXMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708292|emb|CAB90070.1| ATP synthase beta subunit [Eurya japonica]
 gi|14718048|gb|AAK72765.1| ATP synthase beta subunit [Eurya japonica]
          Length = 483

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTLGQPINVTCEVQXLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I R   +  E++  
Sbjct: 219 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEDD-RLTVARARKIERFLSQP 424


>gi|6017802|gb|AAF01635.1| ATP synthase beta subunit [Hydrangea arborescens]
          Length = 496

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVXCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNXCPVDTGTTS-PIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|283958883|ref|ZP_06376328.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|283789601|gb|EFC28424.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           A017934/97]
          Length = 470

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|282859098|ref|ZP_06268229.1| ATP synthase F1, alpha subunit [Prevotella bivia JCVIHMP010]
 gi|282588128|gb|EFB93302.1| ATP synthase F1, alpha subunit [Prevotella bivia JCVIHMP010]
          Length = 527

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 90/430 (20%), Positives = 165/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +++     +  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTVSDGVARIYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCILLGSTTGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +       M +  K P  + RQ
Sbjct: 85  KEGQSVKRTHRIASIRVNDNFLGRVVNPLGEAIDGKGDIDLTNSFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAVAIDTIINQKSFYEQGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   ++          +++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVAALVQTLSDHGALPYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGLS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      E        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINNEQEIAEQMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPEALKGHVRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQIKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDTVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L QS 
Sbjct: 442 KNNQLLIQSQ 451


>gi|113910772|gb|ABI48118.1| ATPase beta subunit [Ptilidium pulcherrimum]
          Length = 472

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V QG+NS   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVAFSPGKMPNIYNSLVVQGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMRGMEVMDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYDIAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|113910830|gb|ABI48147.1| ATPase beta subunit [Hymenophyton flabellatum]
          Length = 416

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/393 (27%), Positives = 174/393 (44%), Gaps = 28/393 (7%)

Query: 50  VHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSAC 100
           V QG+NS   GQ I +  ++        V    +   + +  G  V   G    +     
Sbjct: 1   VVQGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGEA 58

Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160
             GR+ N LG+P+D    +     +  I    P           F+TGI+V+D+  P   
Sbjct: 59  TLGRIFNVLGEPVDNLGPVDTV-TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 117

Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN---- 213
           G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +         
Sbjct: 118 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDE 177

Query: 214 ----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268
                 K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E
Sbjct: 178 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 237

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328
           ++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   + 
Sbjct: 238 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETR 387
            + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +
Sbjct: 296 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQ 355

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           DI  I G     +      V +   I  FL Q 
Sbjct: 356 DIIAILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|61968327|gb|AAX57090.1| ATP synthase beta subunit [Zimmermannia capillipes]
          Length = 479

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 173/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  + + +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 44  GQQINVICEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLG 103

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     S  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 104 EPVDDLGPVDTCTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 162

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 163 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVAL 222

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 223 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 282

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 283 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 340

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 341 SRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDE 400

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 401 LSEED-RLTVARARKIERFLSQP 422


>gi|114572|sp|P00826|ATPB_TOBAC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11789|emb|CAA43612.1| ATPase subunit beta [Nicotiana tabacum]
 gi|552954|gb|AAA84676.1| ATPase beta subunit [Nicotiana tabacum]
 gi|225208|prf||1211235AN ATPase beta
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAIA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATEGLTRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIEVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|329729255|gb|EGG65663.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           21193]
          Length = 470

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNQVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|254689952|ref|ZP_05153206.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 6 str. 870]
 gi|256258207|ref|ZP_05463743.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|260755487|ref|ZP_05867835.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260884508|ref|ZP_05896122.1| ATP synthase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|297249056|ref|ZP_06932764.1| ATP synthase F1, beta subunit [Brucella abortus bv. 5 str. B3196]
 gi|260675595|gb|EEX62416.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 6 str.
           870]
 gi|260874036|gb|EEX81105.1| ATP synthase subunit beta [Brucella abortus bv. 9 str. C68]
 gi|297174189|gb|EFH33546.1| ATP synthase F1, beta subunit [Brucella abortus bv. 5 str. B3196]
          Length = 521

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 105/412 (25%), Positives = 185/412 (44%), Gaps = 19/412 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G+I+ +      V     Q   + + +    +    + +V   +  D V    +   E +
Sbjct: 53  GHITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGL 112

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR++N +G+P+D    + K   +  I    P  + +  
Sbjct: 113 VRGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQST 171

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 172 EAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 231

Query: 198 RGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G
Sbjct: 232 RTREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQG 291

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+
Sbjct: 292 QDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITS 349

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      +
Sbjct: 350 VQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMIDPKVVGEE 409

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 410 HYAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 460


>gi|145597809|ref|YP_001161885.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
 gi|145209505|gb|ABP38912.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F]
          Length = 442

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 154/427 (36%), Positives = 225/427 (52%), Gaps = 22/427 (5%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
           +L    G +  +T +      +   + +G     +  +   +  QV+  + DI Y+ P  
Sbjct: 18  HLARVAGRLVRVTGLLL--ESVGCRLAIGQRCRIESVDETFIEAQVVGFDRDITYLMPFK 75

Query: 77  IGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               +  G  VF     G   I     W GRVIN LG+P+DG   LG    S  +  ++P
Sbjct: 76  HPGGVLGGARVFPSEQDGELLI--GDSWLGRVINGLGEPLDGKGQLGG---STPLQQQLP 130

Query: 134 --PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ V+     G+  I+    +  GQR+G+ AGSG+GKS LL M  R    D V+
Sbjct: 131 QIHPLQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVLLGMITRYTQADVVV 190

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREV+EFI        + KSVVV A +DESP++R  A      IA Y+  KG 
Sbjct: 191 VGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATELCHAIATYYRDKGH 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TR+A + REIA + GE P  +GYP S FS +PRL E  G S      +TA+
Sbjct: 251 DVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESAGNS-----TMTAI 305

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPI D  R++LDGHIVL+R LAE G YP +D   S+SR   +   + + 
Sbjct: 306 YTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQSISRCMSQVIGSQQA 365

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           K  S L      +   + +  +GGY  G D + D+AVH  P I  FL+Q   ++    +F
Sbjct: 366 KAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQFLRQ---EVGHPALF 422

Query: 431 QEITKKL 437
               ++L
Sbjct: 423 SASVEQL 429


>gi|119350551|gb|ABL63226.1| AtpB [Sphaeroplea soleirolii var. crassisepta]
          Length = 392

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 5   VRAVSMNPTEGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEPVDNMGPVN-NEETLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYSCAQTIKKTLQRYKELQDIIAILGLDELSEED-RLIVTRARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|315453870|ref|YP_004074140.1| ATP synthase F1 sector subunit beta [Helicobacter felis ATCC 49179]
 gi|315132922|emb|CBY83550.1| ATP synthase F1 sector beta subunit [Helicobacter felis ATCC 49179]
          Length = 474

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 192/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V        + + +       G++ + + +V     D  V    + + 
Sbjct: 3   GKIVQIMGPVVDVEFEDYLPAIYEALDVDYEFDGESKNLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G+   +       GR+ N +G+ ID  + L K   +  I    P    
Sbjct: 63  EGLTRGQKVVARGKMIEVPVGEEVLGRIFNVVGEVIDNQEPL-KAPTTWPIHRAAPSFEQ 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   ++
Sbjct: 182 VGERTREGNDLYHEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDI 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  + G+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      +  +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQVIGDEHYR 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   +  FL Q 
Sbjct: 360 VATGIQQILQKYKDLQDIIAILGMDELSEED-KKIVERARKVEKFLSQP 407


>gi|329962154|ref|ZP_08300163.1| ATP synthase F1, alpha subunit [Bacteroides fluxus YIT 12057]
 gi|328530559|gb|EGF57426.1| ATP synthase F1, alpha subunit [Bacteroides fluxus YIT 12057]
          Length = 528

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 98/450 (21%), Positives = 174/450 (38%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE +    +      + + G +  ++     +  L +     + +           
Sbjct: 15  LRKQLEGIDTRVQ------LDEIGTVLQVSDGVARIYGL-RNAEASELLEFDNG---IKA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G +V    R   I       GRVI+ LG+P+DG   +
Sbjct: 65  IVMNLEEDNVGAVLLGPTDKIKEGYIVKRTKRIASIMVGEGMLGRVIDPLGEPLDGKGLI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
           G     M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 125 GGELCEMPLERKAPGVIFRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 184

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            T+++     +  D    I   +G++G  V   +           ++VV AT+ +   L+
Sbjct: 185 DTIINQRENYEAGDPVYCIYVAIGQKGSTVASIVNTLRQYGAMDYTIVVAATAGDPAALQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G + L++ D +++ A + RE++           YP  +F    
Sbjct: 245 YYAPFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 304

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 305 RLLERAAKIISQEEVAREMNDLPDSLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISI 364

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+ +L  +G  P +D   SVSR+   A     KK+  +L     ++ E      
Sbjct: 365 TDGQIFLDTNLFNQGNRPAIDVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---A 421

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +   +D +    + +       L Q  
Sbjct: 422 FTKFSGDMDPVTALTIDKGQKNTRLLVQPQ 451


>gi|293395600|ref|ZP_06639883.1| flagellum-specific ATP synthase FliI [Serratia odorifera DSM 4582]
 gi|291421919|gb|EFE95165.1| flagellum-specific ATP synthase FliI [Serratia odorifera DSM 4582]
          Length = 453

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 157/446 (35%), Positives = 241/446 (54%), Gaps = 17/446 (3%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           +L+TL Q         V + G ++  T +    T L   + LG   + +    G+  +  
Sbjct: 11  SLDTLEQRI--AQAPTVRRYGRLTRATGLVLEATGL--QLPLGATCLIERHHAGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF---RISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+      G+    ++       GRV++   KP
Sbjct: 67  SEVVGFNGQHLFLMPLEDVEGIVPGARVYARVAPEGQHAGKQLPLGPALLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     + +     + R  + +    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPDTG-YRAPLFTAPFNPLQRTPIAQVLDVGVRTINGLLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG     +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAAGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAEAGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +  + V +   ++  ++  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTALIDDEHYRRVRNFKQMLASYQRNRDLISVGAYAAGSDPLLDKAMTLYP 425

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            +  +L+Q   + S  D   +  ++L
Sbjct: 426 QMEAYLQQGIFERSGYDDACDQLRQL 451


>gi|219552262|gb|ACL26846.1| ATP synthase beta chain [Phyllanthus virgatus]
          Length = 423

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPV-ETRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|158602283|gb|ABW74608.1| ATP synthase beta subunit [Nigella damascena]
          Length = 476

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGHDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +  +     F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       D   +    +   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYETAQRVKQTLQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|149390547|ref|YP_001294191.1| ATP synthase CF1 beta subunit [Buxus microphylla]
 gi|190358266|sp|A6MM43|ATPB_BUXMI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|146762292|gb|ABQ45256.1| ATP synthase CF1 beta subunit [Buxus microphylla]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|37720971|gb|AAN32488.1| ATP synthase beta subunit [Talbotia elegans]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I++  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQIKVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718109|gb|AAK72794.1| ATP synthase beta subunit [Licania tomentosa]
          Length = 475

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLXVARARKIERFLSQP 421


>gi|54023030|ref|YP_117272.1| F0F1 ATP synthase subunit alpha [Nocardia farcinica IFM 10152]
 gi|81602990|sp|Q5Z0Y3|ATPA_NOCFA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|54014538|dbj|BAD55908.1| putative ATP synthase alpha subunit [Nocardia farcinica IFM 10152]
          Length = 545

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 101/448 (22%), Positives = 181/448 (40%), Gaps = 28/448 (6%)

Query: 6   ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E Y+++      + + G ++  +     V+ L       + +   G     LG
Sbjct: 9   DEIRSAIESYTQSYTPETSIEEVGVVTDTSDGIAHVSGL-PSAMANELLEFPGG---VLG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + +    +    +G   EI  G  V   G    +     + GRV+N LG+PIDG   +
Sbjct: 65  VALNLEDREIGAVILGEFAEIEEGQQVRRTGDVLSVPVGDKFLGRVVNPLGQPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +  + +  +    + RQ VE+   TGI  ID  T +  GQR  +      GK     
Sbjct: 125 EAEEQRV-LELQAATVLQRQPVEEPLATGITAIDALTAIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
             +L+  A  +  D     + I   +G++G  +             + + +V A + +S 
Sbjct: 184 DAILNQKANWETGDPTKQVRCIYVAIGQKGSTIAGVKAALEEHGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +    ++ +  I  +V SI DG + L   L  +G
Sbjct: 304 LHSRLLERCAKLSDEMGGGSMTGLPIIETKANDISAFIPTNVISITDGQVFLESDLFNKG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P ++   SVSR+   A +   KK+  SL   + ++ E         +   +D      
Sbjct: 364 VRPAINVGTSVSRVGGAAQTKGMKKVAGSLRLEMAQYRELE---AFSAFASDLDAASLAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
           + +     + LKQ   S +  ED    I
Sbjct: 421 LERGARWVELLKQDQYSPVPVEDQIVSI 448


>gi|15804229|ref|NP_290268.1| hypothetical protein Z5119 [Escherichia coli O157:H7 EDL933]
 gi|15833822|ref|NP_312595.1| EscN [Escherichia coli O157:H7 str. Sakai]
 gi|168753518|ref|ZP_02778525.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4401]
 gi|168759815|ref|ZP_02784822.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4501]
 gi|168766115|ref|ZP_02791122.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4486]
 gi|168779850|ref|ZP_02804857.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4076]
 gi|195936251|ref|ZP_03081633.1| EscN [Escherichia coli O157:H7 str. EC4024]
 gi|208807966|ref|ZP_03250303.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208813614|ref|ZP_03254943.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208819394|ref|ZP_03259714.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209396453|ref|YP_002273166.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326243|ref|ZP_03442327.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254795643|ref|YP_003080480.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225787|ref|ZP_05940068.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258832|ref|ZP_05951365.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291285056|ref|YP_003501874.1| escN [Escherichia coli O55:H7 str. CB9615]
 gi|12518459|gb|AAG58832.1|AE005596_2 escN [Escherichia coli O157:H7 str. EDL933]
 gi|3414902|gb|AAC31513.1| L0034 [Escherichia coli]
 gi|13364043|dbj|BAB37991.1| type III secretion system protein EscN [Escherichia coli O157:H7
           str. Sakai]
 gi|54311615|emb|CAG17530.1| EscN protein [Escherichia coli]
 gi|189002580|gb|EDU71566.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4076]
 gi|189359190|gb|EDU77609.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4401]
 gi|189364526|gb|EDU82945.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4486]
 gi|189369772|gb|EDU88188.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4501]
 gi|195957519|gb|ACG59630.1| type III secretion system protein EscN [Escherichia coli O157:H7]
 gi|195957578|gb|ACG59688.1| type III secretion system protein EscN [Escherichia coli]
 gi|195957635|gb|ACG59744.1| EscN [Escherichia coli]
 gi|208727767|gb|EDZ77368.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208734891|gb|EDZ83578.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208739517|gb|EDZ87199.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209157853|gb|ACI35286.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217322464|gb|EEC30888.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254595043|gb|ACT74404.1| LEE-encoded type III secretion system factor [Escherichia coli
           O157:H7 str. TW14359]
 gi|255348316|gb|ACU09458.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli]
 gi|290764929|gb|ADD58890.1| escN [Escherichia coli O55:H7 str. CB9615]
 gi|320191258|gb|EFW65908.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. EC1212]
 gi|320639359|gb|EFX08974.1| escN hypothetical protein [Escherichia coli O157:H7 str. G5101]
 gi|320644803|gb|EFX13839.1| escN [Escherichia coli O157:H- str. 493-89]
 gi|320650067|gb|EFX18563.1| escN [Escherichia coli O157:H- str. H 2687]
 gi|320655414|gb|EFX23349.1| escN [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661041|gb|EFX28477.1| escN [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666166|gb|EFX33172.1| escN [Escherichia coli O157:H7 str. LSU-61]
 gi|326337309|gb|EGD61144.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. 1044]
 gi|326341682|gb|EGD65471.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           O157:H7 str. 1125]
          Length = 446

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 156/409 (38%), Positives = 230/409 (56%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I +I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKIINIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 88

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P++ + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPMESNIAAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+    +I +F++QS  D+SS +
Sbjct: 387 IATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYE 435


>gi|123325663|gb|ABM74456.1| ATP synthase beta subunit [Flindersia australis]
          Length = 466

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|197122672|ref|YP_002134623.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
 gi|196172521|gb|ACG73494.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
          Length = 435

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 159/418 (38%), Positives = 229/418 (54%), Gaps = 11/418 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82
           G ++ +T +          V  G+ V  +    + L  +V+ +  D   + P G    + 
Sbjct: 22  GRVTRLTGLVLEAAV--GGVRQGEAVEIRAPGREPLQAEVVGLRDDRAVLVPFGDLGGVG 79

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
           L   V   GR   I       GRV++ LG+P+DG   L  G     +    P  + R+ V
Sbjct: 80  LDAEVVPTGRPHTIRAGPGLLGRVLDGLGRPLDGA-PLPAGLEEWAVDRPAPNPLTRRAV 138

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
                 G+RV+D       GQRIG+FAGSG+GKSTLL   AR    D  ++ LVGERGRE
Sbjct: 139 AAPLPLGVRVLDGLLTAGEGQRIGLFAGSGVGKSTLLGQLARGARADLCVVCLVGERGRE 198

Query: 202 VREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           VREF+E     + L +SVVV ATSD   ++R  A   A  +AE+F+ +GD VLL++DS+T
Sbjct: 199 VREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAHVATAVAEWFAERGDRVLLLVDSVT 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R+A ++RE+   +GE P  +GYP SVF+ LPRLLER G   + +G ITAV +VLV G + 
Sbjct: 259 RYARALREVGLAAGEPPARQGYPPSVFAALPRLLERAGN--RARGGITAVYTVLVAGGDL 316

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            +PIAD VR ILDGH+VL+R++A  GR+P VDPL S+SR+     +         +  L+
Sbjct: 317 EEPIADEVRGILDGHVVLDRAVAAGGRFPAVDPLQSLSRVMPAVAAPAHLAAAGRVRALL 376

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
                 RD+  +G YR G D   D A+ ++P I  FL+Q   + +     +E   +L+
Sbjct: 377 AAHARVRDLVALGAYRAGADPEADLALARLPAIEAFLRQPLGEAA---PLEETLGRLE 431


>gi|115531922|ref|YP_784078.1| ATP synthase CF1 beta subunit [Pelargonium x hortorum]
 gi|122164272|sp|Q06FV3|ATPB_PELHO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112382076|gb|ABI17269.1| ATP synthase CF1 beta subunit [Pelargonium x hortorum]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V      +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPRGKMPYIYNALVVQG--RDTVGQQIHVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTTSPIHKSPP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQKVAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3850900|gb|AAC72142.1| ATP synthase beta subunit [Bellendena montana]
          Length = 490

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      +     +   + + +V +G   D + Q I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDIAFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|262281306|ref|ZP_06059087.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
 gi|262257132|gb|EEY75869.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202]
          Length = 464

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLNVTSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  S+ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARSVQNILQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|170178322|gb|ACB10580.1| ATP synthase beta subunit [Cornus oblonga]
          Length = 455

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|218130974|ref|ZP_03459778.1| hypothetical protein BACEGG_02576 [Bacteroides eggerthii DSM 20697]
 gi|317476285|ref|ZP_07935535.1| ATP synthase F1 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986846|gb|EEC53178.1| hypothetical protein BACEGG_02576 [Bacteroides eggerthii DSM 20697]
 gi|316907559|gb|EFV29263.1| ATP synthase F1 [Bacteroides eggerthii 1_2_48FAA]
          Length = 528

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 98/450 (21%), Positives = 174/450 (38%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++K LE +    +      + + G +  ++     +  L +     + +           
Sbjct: 15  LRKQLEGIDTRVQ------LDEIGTVLQVSDGVARIYGL-RNAEANELLEFDNG---IKA 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G +V    R   I       GRVI+ LG P+DG   +
Sbjct: 65  IVMNLEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIMVGEGMLGRVIDPLGAPLDGKGLI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
           G     M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 125 GGELCEMPLERKAPGVIFRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 184

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            T+++  A  +  D    I   +G++G  V   +           ++VV AT+ +   L+
Sbjct: 185 DTIINQRANYEAGDPVYCIYVAIGQKGSTVASIVNTLREYGAMDYTIVVAATAGDPAALQ 244

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             AP     I EYF   G + L++ D +++ A + RE++           YP  +F    
Sbjct: 245 YYAPFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHS 304

Query: 292 RLLERIGPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER      +                     G++TA+  +     + +  I  +V SI
Sbjct: 305 RLLERAAKIINQEEVAREMNDLPESLRGKVKGGGSLTALPIIETQAGDVSAYIPTNVISI 364

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+ +L  +G  P +D   SVSR+   A     KK+  +L     ++ E      
Sbjct: 365 TDGQIFLDTNLFNQGNRPAIDVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---A 421

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +   +D +    + +       L Q  
Sbjct: 422 FTKFSGDMDPVTALTIDKGQKNTRLLVQPQ 451


>gi|110915574|gb|ABH02575.1| ATP synthase beta subunit [Alopecurus magellanicus]
          Length = 490

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|124361658|gb|ABN09271.1| ATP synthase beta subunit [Diospyros ferox]
          Length = 464

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGIPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|37720983|gb|AAN32494.1| ATP synthase beta subunit [Blandfordia punicea]
          Length = 497

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGRATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNXAXAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER  E  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTXEGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633403|gb|AAM52176.1| ATP synthase beta subunit [Neuropeltis acuminata]
          Length = 490

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 182/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V      +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPCKMPHIYNALVVQGRDNEQTNVTCEVQQLLGNHRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    +   + +  I    P  + 
Sbjct: 81  DGLKRGMEVIDTGAPISVPVGGSTLGRIFNVLGKPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVIHEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 366 -SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI          +      V +   I  FL Q 
Sbjct: 378 LGEEHYETAQRVKQTLQRYKELQDIIAXXXLDELSEED-RLTVARARKIERFLSQP 432


>gi|219552238|gb|ACL26834.1| ATP synthase beta chain [Phyllanthus gneissicus]
          Length = 423

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|219552222|gb|ACL26826.1| ATP synthase beta chain [Phyllanthus chamaecerasus]
 gi|219552224|gb|ACL26827.1| ATP synthase beta chain [Phyllanthus bourgeoisii]
 gi|219552228|gb|ACL26829.1| ATP synthase beta chain [Phyllanthus koniamboensis]
 gi|219552230|gb|ACL26830.1| ATP synthase beta chain [Phyllanthus caudatus]
 gi|219552232|gb|ACL26831.1| ATP synthase beta chain [Phyllanthus aeneus]
 gi|219552234|gb|ACL26832.1| ATP synthase beta chain [Phyllanthus guillauminii]
 gi|219552236|gb|ACL26833.1| ATP synthase beta chain [Phyllanthus vulcani]
 gi|219552248|gb|ACL26839.1| ATP synthase beta chain [Phyllanthus oligospermus]
 gi|219552252|gb|ACL26841.1| ATP synthase beta chain [Phyllanthus reticulatus]
 gi|219552254|gb|ACL26842.1| ATP synthase beta chain [Phyllanthus sp. Kawakita 23]
 gi|219552256|gb|ACL26843.1| ATP synthase beta chain [Phyllanthus liukiuensis]
 gi|219552258|gb|ACL26844.1| ATP synthase beta chain [Phyllanthus pulchroides]
          Length = 423

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|126725129|ref|ZP_01740972.1| F0F1 ATP synthase subunit beta [Rhodobacterales bacterium HTCC2150]
 gi|126706293|gb|EBA05383.1| F0F1 ATP synthase subunit beta [Rhodobacterales bacterium HTCC2150]
          Length = 474

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 184/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +       + + +V   +  + V    +   E + 
Sbjct: 6   GKITQVIGAVVDVQFAGDLPQILNALTTSNNGKNLVLEVAQHLGENTVRAIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G +  +       GR++N  G P+D    + K   S  I    P    +   
Sbjct: 66  RGQDVTDTGGQIMVPVGTATLGRIMNVTGDPVDEKGPV-KTKESRAIHGDAPAFAEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 TEILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGLSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    L+ +T+AE F     
Sbjct: 185 TREGNDLYHEMIESGVIVPDDLEKSKIALVYGQMNEPPGARMRIALSGLTLAEQFRDDSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI     + G+IT+
Sbjct: 245 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERIA--STKSGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D      +
Sbjct: 303 VQAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIIGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+ + +  ++ R++  +DI  I G     +     AV +   +  FL Q P D++
Sbjct: 363 HYKVATDVQQVLQRYKSLQDIIAILGMDELSEDD-KLAVARARKLERFLSQ-PFDVA 417


>gi|119416492|emb|CAI34837.1| ATP synthase beta chain, mitochondrial precursor [Polytomella sp.
           Pringsheim 198.80]
          Length = 574

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/421 (25%), Positives = 187/421 (44%), Gaps = 20/421 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICP 74
                +  GY+S +      V    +   +   +  +G +   + +V +   D  V    
Sbjct: 30  EPAPAIDAGYVSQVIGPVVDVRFDGELPSILSSLEVEGHSVRLVLEVAQHMGDNTVRCIA 89

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G   ++       GR++N +G+P+D    +   D+   I  + P
Sbjct: 90  MDSTDGLVRGQKVVDTGSPIKVPVGRGTLGRIMNVIGEPVDEQGPIDAADI-WSIHREAP 148

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +   ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 149 EFTEQSTEQEILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFS 208

Query: 191 IISLVGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           + + VGER RE  +   + +              K  +V    +E P  R    LT +T+
Sbjct: 209 VFAGVGERTREGNDLYREMIESGVIKLGAERGNSKCTLVYGQMNEPPGARARVALTGLTV 268

Query: 242 AEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +
Sbjct: 269 AEYFRDIEGQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--T 326

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              KG+IT+V +V V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+
Sbjct: 327 TTTKGSITSVQAVYVPADDLTDPGPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRM 386

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +     A+   +   +  ++  ++  +DI  I G     +      V +   I  FL Q
Sbjct: 387 RNPNVIGAEHYNVARGVQKVLQDYKNLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ 445

Query: 420 S 420
            
Sbjct: 446 P 446


>gi|114216032|gb|ABI54627.1| ATPase alpha subunit [Klebsormidium flaccidum]
          Length = 364

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 154/369 (41%), Gaps = 19/369 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L+  +  G+ V     ++   G  + +  + V I   G    I  GD+V
Sbjct: 1   SVGDGIARVYGLN-NIQAGEMVEF---STGVKGMALNLESENVGIVVFGSDTAIKEGDIV 56

Query: 88  FHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G    +       GRV++ALG PIDG   LG  D    ++ K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVPVGKEVLGRVVDALGVPIDGKGPLGTKD-RRRVVVKAPGIIARKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGK----------STLLSMFARSDCFDKVIISLVG 196
           TG++ +D   P+  G R  +      GK            + +  +        +   +G
Sbjct: 116 TGLKAVDSLVPIGRGPRELIIGDRQTGKTAIAIDAILNQRMNNKGSIEADKLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
            +   V + +     +   + +++V AT+ +   L+ +AP     +AEYF     + L+I
Sbjct: 176 RKRSTVAQLVRILEQEGALEYTLIVAATASDPAPLQFLAPYAGCAMAEYFRDNKMHSLII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NITAVISV 313
            D +++ A + R+++      P    +P  VF    RLLER       +G  ++TA+  +
Sbjct: 236 YDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDAEGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVTSITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQMKAMKQVC 355

Query: 374 SSLTHLIHR 382
            SL   + +
Sbjct: 356 GSLKLELAQ 364


>gi|110004066|emb|CAK98405.1| atp synthase beta chain protein [Spiroplasma citri]
          Length = 465

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 116/407 (28%), Positives = 190/407 (46%), Gaps = 13/407 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
            G +  +      V    +Y+  L + +      +  + +V++ I  D V    +G  E 
Sbjct: 4   NGKVVQVLGPVVDVRFTEEYLPELYNAITVNNNGTKLVLEVVQHIGDDTVRAIALGPTEG 63

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V        +       GR+ N LG+ ID      K  L   I  + P    +Q
Sbjct: 64  MVRGMDVIDTKAPITVPVGEEVLGRMFNVLGEAIDEK-PQPKTKLMRPIHREAPSYEEQQ 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
                 +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 123 TTAAILETGIKVVDLLVPFAKGGKIGLFGGAGVGKTVLVQELINNVAKAHGGISVFAGVG 182

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  +   + +    + K+ +V    +E+P  R    LT +TIAEYF      +VLL
Sbjct: 183 ERTREGNDLYYEMIEAGVIDKTALVFGQMNETPGARMRVALTGLTIAEYFRDDKNQDVLL 242

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V 
Sbjct: 243 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSIQAVY 300

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SRL D      +  ++ 
Sbjct: 301 VPSDDLTDPAPATTFAHLDAKVVLDREIAALGIYPAVDPLGSSSRLLDPLVVGEEHYEVA 360

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ +F+E + I  I G     D     AV +   I +FL QS
Sbjct: 361 RGVQEILQKFKELQSIIAILGMDELSDED-KLAVARARKIRNFLSQS 406


>gi|12004139|gb|AAG43909.1|AF213778_1 ATP synthase beta subunit [Lysimachia minoricensis]
          Length = 487

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|14718267|gb|AAK72871.1| ATP synthase beta subunit [Xyris sp. Chase 154]
          Length = 483

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVVFPPGKMPNIYNALIVKG--RDIAGQQITVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +     V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 72  MSATEGLMRRMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +  +   + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 131 AFVQLETRLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFAGVGERTREGNDLYIEMKESGVINEKNLTKSKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNNQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 D-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +  +    +   + R++E +DI  + G     +      V +   I  FL Q 
Sbjct: 369 QLRIVGKEHYETAQRVKQTLQRYKELQDIIAVLGLDELTEED-RLTVARARKIERFLSQP 427


>gi|12004127|gb|AAG43903.1|AF213772_1 ATP synthase beta subunit [Ardisiandra wettsteinii]
          Length = 487

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLHMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|15925093|ref|NP_372627.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927677|ref|NP_375210.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283756|ref|NP_646844.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49484327|ref|YP_041551.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486896|ref|YP_044117.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652125|ref|YP_186910.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           COL]
 gi|82751704|ref|YP_417445.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus RF122]
 gi|87160880|ref|YP_494704.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196007|ref|YP_500820.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148268554|ref|YP_001247497.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394618|ref|YP_001317293.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           JH1]
 gi|151222219|ref|YP_001333041.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980418|ref|YP_001442677.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510310|ref|YP_001575969.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253315771|ref|ZP_04838984.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253731059|ref|ZP_04865224.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253733063|ref|ZP_04867228.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006891|ref|ZP_05145492.2| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257426242|ref|ZP_05602657.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428900|ref|ZP_05605294.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431509|ref|ZP_05607882.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257434218|ref|ZP_05610568.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257437131|ref|ZP_05613171.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257793861|ref|ZP_05642840.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9781]
 gi|258422051|ref|ZP_05684968.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9719]
 gi|258433580|ref|ZP_05688653.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9299]
 gi|258440475|ref|ZP_05690645.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A8115]
 gi|258445683|ref|ZP_05693861.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6300]
 gi|258450137|ref|ZP_05698232.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6224]
 gi|258453187|ref|ZP_05701178.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A5948]
 gi|258453408|ref|ZP_05701390.1| ATP synthase F1, beta subunit [Staphylococcus aureus A5937]
 gi|262049270|ref|ZP_06022145.1| ATP synthase subunit B [Staphylococcus aureus D30]
 gi|262052606|ref|ZP_06024800.1| ATP synthase subunit B [Staphylococcus aureus 930918-3]
 gi|282894747|ref|ZP_06302973.1| ATP synthase F1, beta subunit [Staphylococcus aureus A8117]
 gi|282904772|ref|ZP_06312646.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906447|ref|ZP_06314298.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909416|ref|ZP_06317231.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911668|ref|ZP_06319467.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914952|ref|ZP_06322732.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917452|ref|ZP_06325205.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920281|ref|ZP_06328005.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923091|ref|ZP_06330776.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9765]
 gi|282925492|ref|ZP_06333146.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282929027|ref|ZP_06336612.1| ATP synthase F1, beta subunit [Staphylococcus aureus A10102]
 gi|283771271|ref|ZP_06344160.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus H19]
 gi|293509020|ref|ZP_06667807.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510935|ref|ZP_06669634.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547537|ref|ZP_06672212.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294850073|ref|ZP_06790810.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|295407033|ref|ZP_06816835.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295428690|ref|ZP_06821316.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296275418|ref|ZP_06857925.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297210076|ref|ZP_06926469.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246032|ref|ZP_06929889.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297589830|ref|ZP_06948470.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|304379284|ref|ZP_07362023.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54036785|sp|P63680|ATPB_STAAW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|54036794|sp|P99112|ATPB_STAAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|54040855|sp|P63679|ATPB_STAAM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|60389598|sp|Q6G7K7|ATPB_STAAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|60389623|sp|Q6GEX2|ATPB_STAAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81170378|sp|Q5HE97|ATPB_STAAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573754|sp|Q2FF24|ATPB_STAA3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573755|sp|Q2FWF0|ATPB_STAA8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573756|sp|Q2YUK1|ATPB_STAAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166222418|sp|A7X4U3|ATPB_STAA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|172048985|sp|A6QIU7|ATPB_STAAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081349|sp|A6U3I8|ATPB_STAA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081350|sp|A5IUP8|ATPB_STAA9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189081351|sp|A8YY70|ATPB_STAAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|13701897|dbj|BAB43189.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus N315]
 gi|14247876|dbj|BAB58265.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205198|dbj|BAB95892.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus MW2]
 gi|49242456|emb|CAG41172.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245339|emb|CAG43814.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286311|gb|AAW38405.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           COL]
 gi|82657235|emb|CAI81676.1| ATP synthase beta chain [Staphylococcus aureus RF122]
 gi|87126854|gb|ABD21368.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203565|gb|ABD31375.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741623|gb|ABQ49921.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947070|gb|ABR53006.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375019|dbj|BAF68279.1| ATP synthase, beta subunit [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722553|dbj|BAF78970.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369119|gb|ABX30090.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating
           F-type ATPase beta subunit [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253725186|gb|EES93915.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253728971|gb|EES97700.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257270947|gb|EEV03120.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274242|gb|EEV05759.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277750|gb|EEV08420.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257280857|gb|EEV11002.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283524|gb|EEV13651.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M876]
 gi|257787833|gb|EEV26173.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9781]
 gi|257841951|gb|EEV66383.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9719]
 gi|257849311|gb|EEV73290.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9299]
 gi|257852544|gb|EEV76462.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A8115]
 gi|257855522|gb|EEV78459.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6300]
 gi|257856611|gb|EEV79517.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6224]
 gi|257859133|gb|EEV81990.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A5948]
 gi|257864389|gb|EEV87135.1| ATP synthase F1, beta subunit [Staphylococcus aureus A5937]
 gi|259159476|gb|EEW44526.1| ATP synthase subunit B [Staphylococcus aureus 930918-3]
 gi|259162635|gb|EEW47202.1| ATP synthase subunit B [Staphylococcus aureus D30]
 gi|269941702|emb|CBI50109.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus TW20]
 gi|282312893|gb|EFB43294.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316141|gb|EFB46522.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318654|gb|EFB49011.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321155|gb|EFB51486.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324433|gb|EFB54746.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326686|gb|EFB56984.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330397|gb|EFB59915.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282589333|gb|EFB94425.1| ATP synthase F1, beta subunit [Staphylococcus aureus A10102]
 gi|282593282|gb|EFB98279.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9765]
 gi|282594805|gb|EFB99782.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           C160]
 gi|282762835|gb|EFC02969.1| ATP synthase F1, beta subunit [Staphylococcus aureus A8117]
 gi|283459476|gb|EFC06569.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus H19]
 gi|285817767|gb|ADC38254.1| ATP synthase beta chain [Staphylococcus aureus 04-02981]
 gi|290919657|gb|EFD96730.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094724|gb|EFE24996.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466220|gb|EFF08747.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           M809]
 gi|294823021|gb|EFG39453.1| ATP synthase F1 [Staphylococcus aureus A9754]
 gi|294968058|gb|EFG44085.1| ATP synthase F1 [Staphylococcus aureus A8819]
 gi|295127360|gb|EFG57000.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296885276|gb|EFH24216.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177031|gb|EFH36286.1| ATP synthase F1 [Staphylococcus aureus A8796]
 gi|297576958|gb|EFH95672.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695377|gb|ADI98599.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus ED133]
 gi|302333749|gb|ADL23942.1| ATP synthase subunit beta, AtpB [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|304342143|gb|EFM08043.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312830455|emb|CBX35297.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128774|gb|EFT84774.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315193268|gb|EFU23666.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315196963|gb|EFU27305.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140725|gb|EFW32577.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143701|gb|EFW35478.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323439348|gb|EGA97072.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus O11]
 gi|323442443|gb|EGB00072.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus O46]
 gi|329314788|gb|AEB89201.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723987|gb|EGG60511.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726363|gb|EGG62831.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus
           21172]
          Length = 470

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|323698505|ref|ZP_08110417.1| ATPase, FliI/YscN family [Desulfovibrio sp. ND132]
 gi|323458437|gb|EGB14302.1| ATPase, FliI/YscN family [Desulfovibrio desulfuricans ND132]
          Length = 474

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 150/410 (36%), Positives = 221/410 (53%), Gaps = 8/410 (1%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
             G ++ +  +      +     LG    +    +     +V+          P      
Sbjct: 18  TFGKVTKVVGLIAEGHGI--KAPLGSVCYLLPSGHEPIPAEVVGFRDGACLFMPYSDMRG 75

Query: 81  ISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G L+ +      +       GR ++A G P+DG   +     +  +  + P  + R 
Sbjct: 76  IGPGSLIQNAATPPHVPVGPALLGRAVDAFGAPLDGKGPIHAQTFA-PLHREPPNPLERP 134

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +    GIR ++    L  GQR+G+ AGSG+GKST L M AR    D  +I+LVGERG
Sbjct: 135 RINQPLDVGIRSVNALLTLGKGQRVGIMAGSGVGKSTTLGMMARYTKADVNVIALVGERG 194

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV EF+  D   + + +SV+VVATSD+SP++R  A   A  +AEYF  +G +VLL++DS
Sbjct: 195 REVVEFMERDLGPEGMARSVLVVATSDKSPLIRMRAAYAATAVAEYFRDQGKDVLLMMDS 254

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+   +GE P   GY  SVF+ LP+LLER G + K  G+IT V +VLVDGD
Sbjct: 255 VTRFAMAGREVGLAAGEPPTRGGYTPSVFAHLPQLLERAGKNRK--GSITGVYTVLVDGD 312

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +PIADS RSILDGHIVL R LA+ G YP +D L S+SRL     + + +    +L  
Sbjct: 313 DFTEPIADSTRSILDGHIVLTRELADLGHYPAIDVLRSISRLRSDITTKEAQADGRALLR 372

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            +  F+   D+  IG Y+ G +  +DKA++ V  I  FL+Q   +  + D
Sbjct: 373 HMATFKRVEDMVNIGAYQKGANPEVDKAINMVGPINRFLRQLVEEQETLD 422


>gi|319796134|ref|YP_004157774.1| ATP synthase f1, beta subunit [Variovorax paradoxus EPS]
 gi|315598597|gb|ADU39663.1| ATP synthase F1, beta subunit [Variovorax paradoxus EPS]
          Length = 466

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            +G  +  I +V        Q   + D +  +G       Q  ++   +V    +G  + 
Sbjct: 2   AEGKIVQCIGAVVDVEFPRDQMPKVYDALKFEGGGLTLEVQ-QQLGDGVVRTIALGSSDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG+PID    + + DL+  I  K P      
Sbjct: 61  LRRGLIVTNTGAPITVPVGKATLGRIMDVLGRPIDERGDVSQ-DLTASIHRKAPAYDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             +   +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 PSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +TIAE F  +
Sbjct: 180 ERTREGNDFYHEMADSGVVNLDNLPESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDE 239

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 240 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 EHYNVARAVQGTLQRYKELRDIIAILGMDE-LAPDDKLAVARARKIQRFLSQP 409


>gi|221078695|gb|ACL99422.1| ATP synthase beta subunit [Diospyros calciphila]
 gi|221078697|gb|ACL99423.1| ATP synthase beta subunit [Diospyros cherrieri]
 gi|221078699|gb|ACL99424.1| ATP synthase beta subunit [Diospyros cherrieri]
 gi|221078711|gb|ACL99430.1| ATP synthase beta subunit [Diospyros flavocarpa]
 gi|221078713|gb|ACL99431.1| ATP synthase beta subunit [Diospyros flavocarpa]
 gi|221078717|gb|ACL99433.1| ATP synthase beta subunit [Diospyros labillardierei]
 gi|221078719|gb|ACL99434.1| ATP synthase beta subunit [Diospyros labillardierei]
 gi|221078723|gb|ACL99436.1| ATP synthase beta subunit [Diospyros minimifolia]
 gi|221078725|gb|ACL99437.1| ATP synthase beta subunit [Diospyros minimifolia]
 gi|221078735|gb|ACL99442.1| ATP synthase beta subunit [Diospyros pancheri]
 gi|221078737|gb|ACL99443.1| ATP synthase beta subunit [Diospyros pancheri]
 gi|221078739|gb|ACL99444.1| ATP synthase beta subunit [Diospyros parviflora]
 gi|221078741|gb|ACL99445.1| ATP synthase beta subunit [Diospyros parviflora]
 gi|221078743|gb|ACL99446.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078745|gb|ACL99447.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078747|gb|ACL99448.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078749|gb|ACL99449.1| ATP synthase beta subunit [Diospyros pustulata]
 gi|221078751|gb|ACL99450.1| ATP synthase beta subunit [Diospyros revolutissima]
 gi|221078753|gb|ACL99451.1| ATP synthase beta subunit [Diospyros revolutissima]
 gi|221078777|gb|ACL99463.1| ATP synthase beta subunit [Diospyros umbrosa]
 gi|221078779|gb|ACL99464.1| ATP synthase beta subunit [Diospyros umbrosa]
 gi|221078783|gb|ACL99466.1| ATP synthase beta subunit [Diospyros veillonii]
 gi|221078799|gb|ACL99474.1| ATP synthase beta subunit [Diospyros yaouhensis]
 gi|221078801|gb|ACL99475.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
 gi|221078803|gb|ACL99476.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
 gi|221078805|gb|ACL99477.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
 gi|221078807|gb|ACL99478.1| ATP synthase beta subunit [Diospyros sp. SD-2009]
          Length = 465

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|118917396|dbj|BAF40504.1| ATP synthase beta subunit [Antidesma pentandrum]
          Length = 489

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708678|emb|CAB90018.1| ATP synthase beta subunit [Thymelaea hirsuta]
          Length = 471

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/388 (27%), Positives = 170/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   E +  G  V   G    +       GR+
Sbjct: 25  GRDTAGQQINVTCEVQQLLGNNRVRTVAMSATEGLMRGMEVIDTGTPLSVPVGGATLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGEPIDNLGPVD-TRTTAPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 144 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKDLAE 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDXTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 322 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKIERFLSQP 408


>gi|21633369|gb|AAM52159.1| ATP synthase beta subunit [Breweria rotundifolia]
          Length = 480

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 182/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++++ +    +V ++  +  V    +   
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQMNVACEVQQLLGNNRVRAVAMSDT 70

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 71  NGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TKTTSPIHRSAPAFIQ 129

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 130 LDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 189

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 190 VGERTREGNDLYMEMKESRVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 249

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 250 DVNEQDVLLFIDNIFRFVQAGSEVSALMGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 307

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 308 SITLIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 367

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|62902867|gb|AAY19348.1| ATP synthase beta subunit [Lacistema aggregatum]
          Length = 479

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDDLGPVDTCTTS-PIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEKNVAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EFFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|326794367|ref|YP_004312187.1| ATPase, FliI/YscN family [Marinomonas mediterranea MMB-1]
 gi|326545131|gb|ADZ90351.1| ATPase, FliI/YscN family [Marinomonas mediterranea MMB-1]
          Length = 468

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 154/443 (34%), Positives = 241/443 (54%), Gaps = 13/443 (2%)

Query: 1   MQKNLETLAQ--LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-D 57
           +++ L+  +   L     + +V   G ++ I  +   V        +GD    QG+ +  
Sbjct: 20  IKQRLKNWSSERLQTVQDEPIVKVIGRVTKINGIL--VESRIADARIGDLCTIQGRGNHR 77

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGD 116
            L ++I  + DIV +  +G  E IS+G  +  H+    I       G V++  G+ + G 
Sbjct: 78  VLAEIIGFSSDIVLLSALGALEGISVGASIMPHYQAHCIDSDESLLGSVLDGFGRLLQGK 137

Query: 117 DS---LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
                L + + + +++        R R+     TG+R ID    +  GQRIGVFAG+G G
Sbjct: 138 RDAFTLEESEHTSKVIRDAIAPTQRPRISAPMPTGVRAIDGLLTIGEGQRIGVFAGAGCG 197

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRK 232
           K+TLL+  AR+   D ++  L+GERGRE+REF+  +   +   +SV+V +TSD + + R 
Sbjct: 198 KTTLLAELARNMPCDVIVFGLIGERGRELREFLDHELDEELRSRSVLVCSTSDRTSMERA 257

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
            A  TA  IAE F ++G  VLL++DS+TRFA + REI   +GE P   G+P SV++ LPR
Sbjct: 258 RAASTATAIAEGFRAQGKRVLLLIDSLTRFARAQREIGLAAGEPPGRGGFPPSVYTMLPR 317

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNH-NDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           L+ER G  E   G+ITA+ +VL++GD    DP+AD VRS+LDGHI+L+R LAE+  YP +
Sbjct: 318 LVERAGNMEG-AGSITALYTVLIEGDVIAGDPVADEVRSLLDGHIILSRKLAEKNHYPAI 376

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D L S+SR        +  +  + L +L+  ++E   +  +G Y  G D + D AV    
Sbjct: 377 DVLGSISRTMPNVTDPNHIQSAAVLRNLMSAYKEVEMLIRLGEYEQGNDPLTDTAVALNG 436

Query: 412 IIYDFLKQSPSDLSS-EDVFQEI 433
            I +FL+QS    SS +D    +
Sbjct: 437 TILEFLQQSMRSPSSIQDTLHAL 459


>gi|290490156|gb|ADD31485.1| ATP synthase CF1 beta subunit protein [Nelumbo nucifera]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|271963207|ref|YP_003337403.1| H(+)-transporting two-sector ATPase [Streptosporangium roseum DSM
           43021]
 gi|270506382|gb|ACZ84660.1| H(+)-transporting two-sector ATPase [Streptosporangium roseum DSM
           43021]
          Length = 549

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 88/448 (19%), Positives = 181/448 (40%), Gaps = 28/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG------GYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           +    + +    E + +    +G      G +         V+ L       + +  +  
Sbjct: 4   LTIRPDEIRDALERFVQAYEPEGAAREEIGTVVDCGDGIAHVSGL-PSAMANELLEFEDG 62

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
                G  + +++  + +  +G   +I  G  V   G    +     + GRV++ LG P+
Sbjct: 63  ---TRGLALNLDVREIGVVVLGDFSKIEEGQSVRRTGEVLSVPVGDAFLGRVVDPLGVPM 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG  ++ + +    +  + P  + RQ V++  +TG++ +D  TP+  GQR  +    G G
Sbjct: 120 DGKGAI-ESEGLRALELQAPSVVQRQPVKEPLQTGLKAVDAMTPIGRGQRQLIIGDRGTG 178

Query: 174 KSTLLSMFARS----------DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVA 222
           K+ +      +          D   + +   VG++G  + +             + +V A
Sbjct: 179 KTAIAVDTILNQRENWLSGDPDKQVRCVYVAVGQKGSTIAQVKGRLEEAGAMEYTTIVAA 238

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + +    + +AP T   I +++  +G +VL++ D +T+ A + R ++      P    +
Sbjct: 239 PASDPAGYKYLAPYTGSAIGQHWMYQGKHVLIVFDDLTKQADAYRAVSLLLRRPPGREAF 298

Query: 283 PTSVFSELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     K+ G+  +T +  +   G++ +  I  +V SI DG   L  
Sbjct: 299 PGDVFYLHSRLLERCAKLSKDMGSGSMTGLPIIETKGNDVSAFIPTNVISITDGQCFLET 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     +K+  +L   + +F   RD+     +   +D
Sbjct: 359 DLFNSGVRPAINVGVSVSRVGGSAQVKAMRKVAGTLRLSLSQF---RDLEAFASFASDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +   + + LKQ+       +
Sbjct: 416 AASRAQLERGQRLVELLKQAQYSPLPVE 443


>gi|119350503|gb|ABL63202.1| AtpB [Golenkinia brevispicula]
          Length = 389

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   + S
Sbjct: 2   DNCVRAVAMNPTDGLMRGMEVLDTGKPLTVPVGKATLGRIFNVLGEPVDNMGPVDANE-S 60

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 61  LPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 120

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   +               K  +V    +E P  R   
Sbjct: 121 AKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRV 180

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AE+F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 181 ALTALTMAEFFRDINKQDVLFSMDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTL 240

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 241 QERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 298

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +       +       S+   + R++E +DI  I G     +      V +   
Sbjct: 299 LDSTSTMLQPWILGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARK 357

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 358 IERFLSQP 365


>gi|5758910|gb|AAD50884.1| ATP synthase beta subunit [Ruscus aculeatus]
          Length = 496

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4206592|gb|AAD11727.1| ATP synthase beta subunit [Lunasia amara]
          Length = 465

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GHVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|114558|sp|P26531|ATPB_NICSP RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11766|emb|CAA43610.1| ATPase subunit beta [Nicotiana sp.]
          Length = 498

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L  +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLDAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|327399150|ref|YP_004340019.1| ATP synthase subunit beta [Hippea maritima DSM 10411]
 gi|327181779|gb|AEA33960.1| ATP synthase subunit beta [Hippea maritima DSM 10411]
          Length = 468

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 12/378 (3%)

Query: 51  HQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
            +G  +D + +V + +    V    +   + +  G  V +              GR++N 
Sbjct: 38  IEGATADLILEVQQHLGEKRVRTIAMDSTDGLVRGTEVENTNNYITTPVGEPVLGRIMNV 97

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+P+D    +   D+   I    PP   +    + F+TGI+VID+  P   G + G+F 
Sbjct: 98  VGEPVDELGPIS-SDVRWPIHRDAPPLEEQSTSSEMFETGIKVIDLLCPYAKGGKTGLFG 156

Query: 169 GSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATS 224
           G+G+GK+ L+     +         +   VGER RE  +   +     +  K+ ++    
Sbjct: 157 GAGVGKTVLIMELIHNVAMHHGGYSVFCGVGERTREGNDLWNEMKESGVLDKAALIYGQM 216

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +E P  R    LT +T+AEYF  +   +VL+ +D+I RF  +  E++   G +P A GY 
Sbjct: 217 NEPPGARARVGLTGLTVAEYFRDEKHLDVLIFIDNIFRFTQAGSEVSALLGRIPSAVGYQ 276

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            ++ +++  L ERI  +  +KG+IT+V ++ V  D+  DP   +  S LD   VL+R LA
Sbjct: 277 PTLGTDMGELQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRKLA 334

Query: 344 EEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           E G YP VDPL S SR+ D A    +  +    +  ++ R++E +DI  I G     +  
Sbjct: 335 ELGIYPAVDPLDSTSRILDPAVVGREHYETARQVQEILQRYKELQDIIAILGMEELSEED 394

Query: 403 LDKAVHQVPIIYDFLKQS 420
               V++   I  FL Q 
Sbjct: 395 -KVIVNRARKIQRFLSQP 411


>gi|183206580|gb|ACC54488.1| ATP synthase beta subunit [Campanula grossheimii]
          Length = 465

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|170178340|gb|ACB10589.1| ATP synthase beta subunit [Cornus sessilis]
          Length = 454

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLIVARARKIERFLSQP 395


>gi|221132854|ref|XP_002156597.1| PREDICTED: similar to ATP synthase beta subunit [Hydra
           magnipapillata]
          Length = 534

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 194/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V   S    + + +  QG+ S  + +V   +  +IV    +   E + 
Sbjct: 68  GKVVAVIGAVVDVQFESNLPSILNALEVQGRESRLVLEVAQHLGENIVRTIAMDGTEGLV 127

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G+LV   G    I       GR++N +G+PID    +        I ++ P  +     
Sbjct: 128 RGNLVVDSGSPICIPVGPETLGRIMNVIGEPIDERGPII-TKTKAPIHAEAPAFVEMSVQ 186

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 187 QEILITGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 246

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   +++        D   K  +V    +E P  R    LT +T+AEYF      
Sbjct: 247 TREGNDLYHEFMETGVINLKDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQ 306

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 307 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSV 364

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            ++ V  D+  DP   +  + LD + VL+R +AE G YP VDPL S SR+ D        
Sbjct: 365 QAIYVPADDLTDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSNSRILDPNIVGQKH 424

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +  S+  ++  ++  +DI  I G     +      V +   I  FL Q        ++
Sbjct: 425 YDVARSVQKILQDYKSLQDIIAILGMDELSEED-KNIVARARKIQKFLSQP---FQVAEI 480

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 481 FTGHAGKL 488


>gi|239817829|ref|YP_002946739.1| F0F1 ATP synthase subunit beta [Variovorax paradoxus S110]
 gi|239804406|gb|ACS21473.1| ATP synthase F1, beta subunit [Variovorax paradoxus S110]
          Length = 466

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            +G  +  I +V        Q   + D +  +G       Q  ++   +V    +G  + 
Sbjct: 2   AEGKIVQCIGAVVDVEFPRDQMPKVYDALKFEGGGLTLEVQ-QQLGDGVVRTIALGSSDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V + G    +       GR+++ LG+PID    + + DL+  I  K P      
Sbjct: 61  LRRGLIVTNTGAPITVPVGKATLGRIMDVLGRPIDERGDVSQ-DLTASIHRKAPAYDELS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             +   +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 PSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +TIAE F  +
Sbjct: 180 ERTREGNDFYHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDE 239

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 240 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 298 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGE 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 EHYNVARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 409


>gi|110915638|gb|ABH02607.1| ATP synthase beta subunit [Festuca subverticillata]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADTQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|148378162|ref|YP_001252703.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. ATCC
           3502]
 gi|153930870|ref|YP_001382563.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A str. ATCC
           19397]
 gi|153935797|ref|YP_001386115.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A str. Hall]
 gi|168177489|ref|ZP_02612153.1| ATP synthase F1, beta subunit [Clostridium botulinum NCTC 2916]
 gi|168182234|ref|ZP_02616898.1| ATP synthase F1, beta subunit [Clostridium botulinum Bf]
 gi|237793475|ref|YP_002861027.1| ATP synthase F1, beta subunit [Clostridium botulinum Ba4 str. 657]
 gi|190358654|sp|A7FQH9|ATPB_CLOB1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358656|sp|A5HY52|ATPB_CLOBH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585441|sp|C3KYJ3|ATPB_CLOB6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148287646|emb|CAL81711.1| ATP synthase beta chain [Clostridium botulinum A str. ATCC 3502]
 gi|152926914|gb|ABS32414.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. ATCC
           19397]
 gi|152931711|gb|ABS37210.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. Hall]
 gi|182671405|gb|EDT83379.1| ATP synthase F1, beta subunit [Clostridium botulinum NCTC 2916]
 gi|182674532|gb|EDT86493.1| ATP synthase F1, beta subunit [Clostridium botulinum Bf]
 gi|229260674|gb|ACQ51707.1| ATP synthase F1, beta subunit [Clostridium botulinum Ba4 str. 657]
 gi|322804426|emb|CBZ01976.1| ATP synthase beta chain [Clostridium botulinum H04402 065]
          Length = 463

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
           +     +   + +V   I  D +    +   E +  G      G+   +       GR+ 
Sbjct: 31  LEINAGDRKVIAEVEQHIGDDTIRAIAMEDTEGLKRGMEALDTGKSVSVPVGKEVLGRLF 90

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LGKPIDG       + S  I    P    +    + F+TGI+VID+  P   G +IG+
Sbjct: 91  NVLGKPIDGAGEFI-SEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGL 149

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+ L+     +   +     + + VGER RE  +   +     + +K+ +V  
Sbjct: 150 FGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEKTALVFG 209

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 210 QMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 269

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+RS+
Sbjct: 270 QPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSI 327

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E G YP VDPL S SR+ D      +  ++   + +++ R+ E +DI  I G     + 
Sbjct: 328 TELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAILGIDELSEE 387

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 388 D-KLVVGRARKIQRFLSQP 405


>gi|12004141|gb|AAG43910.1|AF213779_1 ATP synthase beta subunit [Hymenandra wallichii]
          Length = 487

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA T+A
Sbjct: 198 VFGGVGERTREGNDLHMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTAGTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4206604|gb|AAD11733.1| ATP synthase beta subunit [Ptaeroxylon obliquum]
          Length = 483

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQPINVACEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        D  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|28630330|gb|AAM93477.1| H+-transporting ATP synthase alpha subunit isoform 1 [Myxine
           glutinosa]
          Length = 364

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 155/341 (45%), Gaps = 15/341 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  D V +   G  + I  GD+V   G    +       GRV +ALG PIDG  +
Sbjct: 21  GMALNLEPDNVGVVVFGNDKLIKEGDVVKRTGAIVGVPVGEELLGRVADALGNPIDGKGA 80

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           L  G     +  K P  + R  V +  +TGI+ +D   P+  GQR  +      GK    
Sbjct: 81  LI-GKQRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIA 139

Query: 175 -STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227
             T+++    ++  D       I   +G++   V + ++     D +K ++VV AT+ ++
Sbjct: 140 VDTIINQKRFNEGKDEKKKLYCIYVAIGQKRSTVAQLVKRLSDADAMKYTIVVSATASDA 199

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +  ++ EYF   G + L+I D +++ A + R+++      P    YP  VF
Sbjct: 200 APLQYLAPYSGCSMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 259

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER          G++TA+  +     + +  I  +V SI DG I L   L  +
Sbjct: 260 YLHSRLLERAAKMNDNFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYK 319

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           G  P ++   SVSR+   A +   K++  S+   + ++ E 
Sbjct: 320 GIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREV 360


>gi|254708799|ref|ZP_05170610.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis B2/94]
 gi|256030325|ref|ZP_05443939.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|261316292|ref|ZP_05955489.1| ATP synthase subunit beta [Brucella pinnipedialis B2/94]
 gi|265987359|ref|ZP_06099916.1| ATP synthase subunit beta [Brucella pinnipedialis M292/94/1]
 gi|261295515|gb|EEX99011.1| ATP synthase subunit beta [Brucella pinnipedialis B2/94]
 gi|264659556|gb|EEZ29817.1| ATP synthase subunit beta [Brucella pinnipedialis M292/94/1]
          Length = 521

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 105/411 (25%), Positives = 185/411 (45%), Gaps = 19/411 (4%)

Query: 25  YISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           +I+ +      V     Q   + + +    +    + +V   +  D V    +   E + 
Sbjct: 54  HITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLV 113

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR++N +G+P+D    + K   +  I    P  + +   
Sbjct: 114 RGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTE 172

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+  F  +         + + VGER
Sbjct: 173 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMEFINNVAKAHGGYSVFAGVGER 232

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 233 TREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 293 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      + 
Sbjct: 351 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEH 410

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 411 YAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 460


>gi|195183491|dbj|BAG66960.1| ATP synthase beta subunit [Gloeospermum dichotomum]
 gi|195183494|dbj|BAG66961.1| ATP synthase beta subunit [Gloeospermum longifolium]
 gi|195183514|dbj|BAG66970.1| ATP synthase beta subunit [Leonia crassa]
 gi|195183516|dbj|BAG66971.1| ATP synthase beta subunit [Leonia glycycarpa var. racemosa]
          Length = 489

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110915676|gb|ABH02626.1| ATP synthase beta subunit [Parapholis incurva]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    + 
Sbjct: 13  GRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P  
Sbjct: 73  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESSATFPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     +
Sbjct: 252 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--STK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75330464|sp|Q8MBK3|ATPB_CRETR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633371|gb|AAM52160.1| ATP synthase beta subunit [Cressa truxillensis]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V      +  + + +V QG++++ +    +V +I  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPYIYNALVVQGRDNEQMNVTCEVQQILGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGVSISVPVGGATLGRIFNVLGEPVDKLGPVD-TKTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|15616698|ref|NP_239910.1| flagellum-specific ATP synthase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681455|ref|YP_002467840.1| flagellum-specific ATP synthase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682011|ref|YP_002468395.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|11386785|sp|P57178|FLII_BUCAI RecName: Full=Flagellum-specific ATP synthase
 gi|25290463|pir||D84938 H+-transporting two-sector ATPase (EC 3.6.3.14), flagellum-specific
           [imported] - Buchnera sp. (strain APS)
 gi|10038761|dbj|BAB12796.1| flagellum-specific ATP synthase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621744|gb|ACL29900.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624298|gb|ACL30453.1| flagellum-specific ATP synthase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 467

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 155/449 (34%), Positives = 244/449 (54%), Gaps = 21/449 (4%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDN 58
           KN+ +     E  S   ++  G + SI  +   V  L+    +G   + +    GKN++ 
Sbjct: 24  KNISSFESRIEKLSD--IINYGRLVSINGLILEVVGLNT--SIGSECLIERTIDGKNANI 79

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------RISPSACWCGRVINAL 109
             +VI  + +  ++        I  G  VF   +          ++       GRV++  
Sbjct: 80  NAEVIGFSGEKTFLLSFEDIHGIFPGARVFS--KIASNSNFFIKKLPLGMELLGRVLDGR 137

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    +        I +     +NR  + +   TGIR I+    +  GQ+IG+F+ 
Sbjct: 138 GQPLDQLPKID-HKYYSTIKNYSINPLNRTPITEVLDTGIRAINGLLTIGRGQKIGIFSS 196

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228
           SGIGKS LL M AR    D ++I+L+GERGREV++FIE+ LG   L +SV++ A +D SP
Sbjct: 197 SGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVIIAAPADVSP 256

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
           +L+  A   A  IAEYF     +VLLI+DS+TR+A + REI+ + GELPV++GYP+S+FS
Sbjct: 257 LLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSKGYPSSIFS 316

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           ++P L+ER G   K KG+IT+  +VL +G++  DP++   RS+LDGHI+L+R  A+ G Y
Sbjct: 317 KIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSRYYADLGHY 376

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P +D  +S+SR+     +A +         L+  ++  RD+  IG Y  G D+ILD A+ 
Sbjct: 377 PAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTDVILDHAIK 436

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             P +  FL+Q  S+ S      E   K+
Sbjct: 437 IWPKLEKFLQQEISEKSDYLFSCEALNKI 465


>gi|290490146|gb|ADD31480.1| ATP synthase CF1 beta subunit protein [Dillenia indica]
          Length = 498

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V        +       GR
Sbjct: 50  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTEAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|260911867|ref|ZP_05918433.1| ATP synthase F1 [Prevotella sp. oral taxon 472 str. F0295]
 gi|260633983|gb|EEX52107.1| ATP synthase F1 [Prevotella sp. oral taxon 472 str. F0295]
          Length = 529

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 90/428 (21%), Positives = 164/428 (38%), Gaps = 37/428 (8%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + ++      V  L +     + +  +      +  V+ +  D V    +G    I  
Sbjct: 31  GTVLTVGDGVARVYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCVLLGPTSGIKE 86

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRV 141
           G +V    R   I  +    GRVIN LG+ IDG   +   +   M +  K P  + RQ V
Sbjct: 87  GQVVKRTHRIASIRMNDNMLGRVINPLGEAIDGLGEIDLTNAFEMPLDRKAPGVIYRQPV 146

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVIISL 194
           ++  +TG++ +D   P+  GQR  +      GK+ +      +             I   
Sbjct: 147 KEPLQTGLKGVDSMIPIGRGQRELIIGDRQTGKTAIALDTIINQKSFYDAGKPVYCIYVA 206

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V   ++          +++V AT+ +   ++  AP     I EYF  +G++ L
Sbjct: 207 IGQKASTVATLVQTLKERGALDYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGEHAL 266

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE---------- 303
           ++ D +++ A + RE++           YP  VF    RLLER      +          
Sbjct: 267 VVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINDQQEVAEQMNDL 326

Query: 304 ----------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
                      G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++ 
Sbjct: 327 PECLKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETDLFNQGFRPAINV 386

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     KK+  +L   + ++ E         +   +D +    + +    
Sbjct: 387 GISVSRVGGSAQIKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDAVTAMTLDRGRKN 443

Query: 414 YDFLKQSP 421
              L Q  
Sbjct: 444 TQLLIQPQ 451


>gi|257785098|ref|YP_003180315.1| ATP synthase F1, alpha subunit [Atopobium parvulum DSM 20469]
 gi|257473605|gb|ACV51724.1| ATP synthase F1, alpha subunit [Atopobium parvulum DSM 20469]
          Length = 557

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/454 (24%), Positives = 185/454 (40%), Gaps = 31/454 (6%)

Query: 6   ETLAQLAEDYSK--NLVVQGGY--ISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNL 59
             +AQL E  SK  + V Q     ++ +      V  L +    G+ +            
Sbjct: 16  AVMAQLRERLSKVNSTVSQQEVSAVTEVADGIARVAGL-RSAMAGELLEFTSSVTGHSVF 74

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDS 118
           G    ++   V     G   EI  GD     GR    P+     GRV+N LG+PIDG  +
Sbjct: 75  GLAQNLDETSVGAVLFGEVSEIKEGDECRTTGRVMDIPAGYDMLGRVVNPLGQPIDGLGA 134

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        I  K P  M RQ V +  +TG+  ID   P+  GQR  +      GK+ + 
Sbjct: 135 IHAT-HRRPIEFKAPGIMQRQPVCEPVQTGLLAIDAMVPVGRGQRELIIGDRKTGKTAIA 193

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
             ++  + +     I   +G++   V    E      +  K+V+V AT+ +S  ++ +AP
Sbjct: 194 IDAIVNQKNTDMICIYVAIGQKASTVANIRESLSRHGVLDKTVIVAATAADSAPMQYIAP 253

Query: 236 LTAVTIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +    I E+F                 +VL++ D +++ A + R+++      P    YP
Sbjct: 254 MAGAAIGEFFMYNDKDGKPADKDHPGGHVLVVYDDLSKQAVAYRQMSLTLHRPPGREAYP 313

Query: 284 TSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             +F    RLLER      E G  ++TA+  +     + +  I  +V SI DG I L  +
Sbjct: 314 GDIFYLHSRLLERACKLSDENGAGSLTALPIIETQEGDVSAYIPTNVISITDGQIYLQSN 373

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G+ P VD   SVSR+   A     K++  +L   +  + E +       +   +D 
Sbjct: 374 LFFQGQRPAVDVGISVSRVGGDAQVKAMKQVAGTLRLDLASYREKQ---AFSQFGSDLDA 430

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
                ++    + + LKQ     S+ DV  +I  
Sbjct: 431 TTQYQLNHGAHMMELLKQPR--YSALDVVDQICA 462


>gi|195183484|dbj|BAG66957.1| ATP synthase beta subunit [Decorsella paradoxa]
          Length = 489

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I+   P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPILRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110915578|gb|ABH02577.1| ATP synthase beta subunit [Amphibromus scabrivalvis]
 gi|110915604|gb|ABH02590.1| ATP synthase beta subunit [Calamagrostis arundinacea]
 gi|110915702|gb|ABH02639.1| ATP synthase beta subunit [Torreyochloa pallida var. pauciflora]
 gi|110915704|gb|ABH02640.1| ATP synthase beta subunit [Triplachne nitens]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|111283716|gb|ABH09208.1| ATPase beta subunit [Triandrophyllum subtrifidum]
          Length = 470

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V +G+N+   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVAFSPGKMPNIYNSLVVRGQNAA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRAAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|20269402|gb|AAM17928.1| ATP synthase beta subunit [Clethra arborea]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDTAGQPMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708624|emb|CAB89982.1| ATP synthase beta subunit [Roussea simplex]
          Length = 480

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRITQIIGPVLDVAFSPGKMPNIYNALVVKG--RDIXGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TQKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGKEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|302692110|ref|XP_003035734.1| hypothetical protein SCHCODRAFT_65406 [Schizophyllum commune H4-8]
 gi|300109430|gb|EFJ00832.1| hypothetical protein SCHCODRAFT_65406 [Schizophyllum commune H4-8]
          Length = 538

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/423 (26%), Positives = 191/423 (45%), Gaps = 19/423 (4%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDI 69
            +Y+       G + ++      V   +  +   L    V        + +V   +  + 
Sbjct: 58  RNYATEAKGNVGSVKTVIGAVVDVQFDTDNLPPILNALEVQDFSGGRLVLEVASHLGENS 117

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G   +I       GR++N +G+PID    + KGD  + I
Sbjct: 118 VRTIAMDGTEGLVRGQKVVDTGAPIQIPVGKATLGRIMNVIGEPIDERGPI-KGDKLLPI 176

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +  P  +++    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 177 HADPPAFVDQSTTAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKA 236

Query: 189 KV---IISLVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAV 239
                I   VGER RE  +   + +       +   K  +V    +E P  R    LT +
Sbjct: 237 HGGFSIFCGVGERTREGNDLYHEMIETGVINLEGDSKVALVFGQMNEPPGARARVALTGL 296

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI 
Sbjct: 297 TIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI- 355

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S
Sbjct: 356 -TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSKS 414

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +   + +++  ++  ++  +DI  I G     +      V +   I  F+
Sbjct: 415 RMLDPRIVGQEHYAIATAVQKILQDYKSLQDIIAILGMDELSEED-KLTVERARKIQRFM 473

Query: 418 KQS 420
            Q 
Sbjct: 474 SQP 476


>gi|258407029|ref|ZP_05680179.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9763]
 gi|257841362|gb|EEV65806.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9763]
          Length = 470

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|240143395|ref|ZP_04741996.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|257204664|gb|EEV02949.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|291540378|emb|CBL13489.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           XB6B4]
          Length = 465

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 116/410 (28%), Positives = 186/410 (45%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN------LDIVYICPVGI 77
           G I+ I      +      +   +  +      D  G+ + +        D V    +G 
Sbjct: 6   GKITQIIGAVLDIKFTEGNLPEINDAIRIPLRGDQAGKELTVEVSQHLGDDTVRCIAMGS 65

Query: 78  GEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G D V   G   +       GR+ N LG PID  D    G     I    P   
Sbjct: 66  TDGLVRGMDAVAAGGPISVPVGENTLGRMFNVLGDPIDEIDP-PAGVEKWPIHRPAPAFE 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
            +   ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+  
Sbjct: 125 EQATSQEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFT 184

Query: 195 -VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG  +
Sbjct: 185 GVGERTREGNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKD 244

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V 
Sbjct: 245 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQ 302

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370
           +V V  D+  DP   +  + LD   VL RS+AE G YP VDPL S SR+ D      E  
Sbjct: 303 AVYVPADDLTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHF 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     +      V +   +  FL Q 
Sbjct: 363 EVARGVQEILQKYKELQDIIAILGMDELSEDD-KLVVSRARKVQRFLSQP 411


>gi|156741251|ref|YP_001431380.1| F0F1 ATP synthase subunit beta [Roseiflexus castenholzii DSM 13941]
 gi|190358702|sp|A7NIQ9|ATPB_ROSCS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|156232579|gb|ABU57362.1| ATP synthase F1, beta subunit [Roseiflexus castenholzii DSM 13941]
          Length = 471

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/414 (27%), Positives = 188/414 (45%), Gaps = 19/414 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
             G ++ I  V                   +        + +V + +   +V    +   
Sbjct: 4   ATGIVTDIIGVVINAKFPEHETPEIYNALEIRLENGKRLVAEVQQQLGGGVVKAVAMSST 63

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      GR   +       GRV + LG PIDG+  +   +    I    P   +
Sbjct: 64  DGMRRGVKAIDTGRPIAVPVGPGTLGRVFDVLGDPIDGEGPVQTTEYR-PIHRPPPALED 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISL 194
           +    + F+TGI+VID+  P   G + G+F G+G+GK+ ++     +   +     + + 
Sbjct: 123 QSTTAQIFETGIKVIDLIAPFTRGGKTGIFGGAGVGKTVIIQELIANVAKEQSGYSVFAG 182

Query: 195 VGERGREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           VGER RE  + I +              K+V+V    +E P  R    LTA+T+AEYF  
Sbjct: 183 VGERSREGNDLIHEMKEARIDEKTRVFDKTVMVFGQMNEPPGARLRVGLTAMTMAEYFRD 242

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I RF  +  E++   G +P   GY  ++ +E+  L ERI  +  +KG+I
Sbjct: 243 EGRDVLLFIDNIFRFVQAGSEVSALLGRMPSQVGYQPTLGTEMGELQERI--TSTKKGSI 300

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D++ DP   +V S LD  I L RS+A +G YP VDPLAS SR+ D     
Sbjct: 301 TSMQAVYVPADDYTDPAPATVFSHLDATITLERSIAAKGIYPAVDPLASTSRILDPNIVG 360

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +  ++ R+++ +DI  I G     D      V +   I  F  Q 
Sbjct: 361 EEHYRVAREVQRVLQRYKDLQDIIAILGVEELSDED-KLTVARARKIERFFSQP 413


>gi|6724287|gb|AAB51733.2| ATP synthase beta chain [Ophioglossum reticulatum]
          Length = 458

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/383 (27%), Positives = 174/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + ++ G  VF  G    +       GR+ N LG
Sbjct: 20  GQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMQVFDTGAPLVVPVGESTLGRIFNVLG 79

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +   + S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 80  EPVDELGPVDADETS-PIHKPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 138

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 139 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNVSESKVAL 198

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 199 VYGQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLSIDNIFRFVQAGSEVSALLGRMPS 258

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 259 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 316

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  K    +   + R++E +DI  I G   
Sbjct: 317 SRGLAAKGIYPAVDPLDSTSTMLQPLIVGEEHYKTAQGVKQTLQRYKELQDIIAILGLDE 376

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 377 LSEED-RLTVARARKIERFLSQP 398


>gi|7688031|emb|CAB89721.1| ATP synthase beta subunit [Peltoboykinia tellimoides]
          Length = 498

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPYIYNALVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|3850982|gb|AAC72183.1| ATP synthase beta subunit [Stenocarpus salignus]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLXMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|4206610|gb|AAD11736.1| ATP synthase beta subunit [Trichilia emetica]
 gi|7708682|emb|CAB90017.1| ATP synthase beta subunit [Trichilia emetica]
          Length = 477

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 36  KGRDTVGQPINVTCEVQQLLGNNRVRAVXMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 96  IFNVLGEPVDNLGPVD-TRTTSPIHKPSPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 154

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 155 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 215 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 274

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 275 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 332

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 333 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 392

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 393 ILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|322436128|ref|YP_004218340.1| alternate F1F0 ATPase, F1 subunit alpha [Acidobacterium sp.
           MP5ACTX9]
 gi|321163855|gb|ADW69560.1| alternate F1F0 ATPase, F1 subunit alpha [Acidobacterium sp.
           MP5ACTX9]
          Length = 521

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/427 (26%), Positives = 190/427 (44%), Gaps = 15/427 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            + L      YS +LV +  G I+S+++   T++ L   +   + V  +    D LG   
Sbjct: 16  FDELTHACATYSPSLVPEEIGIITSLSTGIATISGL-PNLGNEELVSFK---DDRLGLAF 71

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   V +  +   +++ +GD V   GR   I       GRV++ LG+PIDG       
Sbjct: 72  NVDEGEVGLILLCDYQDLHVGDEVRRTGRVMDIGVGNGLLGRVLDPLGRPIDGKPP-PLT 130

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +  + +    P  M+R  V    +TG++V+D   P+  GQR  +      GK+ + +   
Sbjct: 131 EHRLPVERPAPAIMDRAPVSVPLQTGLKVVDAMIPIGRGQRELILGDRQTGKTAIATDTI 190

Query: 183 RSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        +   +G+R   V + I +         +VVVVA  + +P L  + P  A 
Sbjct: 191 LNQRGQNVVCVYCAIGQRASSVAKVIANLEEKGAMEYTVVVVAEGNNAPGLVYITPYAAT 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +IAEYF  +G +VL++ D +T+ A + RE++      P    YP  +F    R+LER   
Sbjct: 251 SIAEYFMEQGRDVLIVYDDLTQHAQAYRELSLLLRRPPGREAYPGDIFYIHSRMLERSTH 310

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             K+   G++TA+  +  D  + +  I  ++ SI DG I L+ +L E G  P VD   SV
Sbjct: 311 LIKDLGGGSLTALPIIETDAQDISAYIPTNLISITDGQIYLSPTLFELGVLPAVDVALSV 370

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +A     + +   L     +FEE       G +   +D    K +     I   L
Sbjct: 371 SRVGSQAQKPAYRAVAGDLKLAYSQFEELETFAKFGTH---LDDATRKTIDHGQRIRACL 427

Query: 418 KQSPSDL 424
           KQ  S  
Sbjct: 428 KQPQSQP 434


>gi|75339191|sp|Q4PLI6|ATPB_BETVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|67527182|gb|AAY68361.1| ATP synthase beta subunit [Beta vulgaris]
          Length = 498

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++  G+  D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVTGQ--DTTGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|15612380|ref|NP_224033.1| flagellum-specific ATP synthase [Helicobacter pylori J99]
 gi|9973201|sp|Q9ZJJ3|FLII_HELPJ RecName: Full=Flagellum-specific ATP synthase
 gi|4155920|gb|AAD06888.1| FLAGELLUM-SPECIFIC ATP SYNTHASE [Helicobacter pylori J99]
          Length = 434

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 231/423 (54%), Gaps = 7/423 (1%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGI 77
           L  + G +  I          +  V  GD V + +   ++ +G V+    +     P   
Sbjct: 16  LSPRYGSVKKIMPNIVYADGFNPSV--GDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNF 73

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E    GD V                GRV+N LG+ ID    L    L+  +++     +
Sbjct: 74  IEGARAGDKVLFLKEGLNFPVGRNLLGRVLNPLGQVIDNKGVLDYERLA-PVITTPIAPL 132

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+G
Sbjct: 133 KRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIG 192

Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           ERGRE+ EFIE  L  +L   V+VVATSD+SP++RK     A+++AEYF ++G +VL I+
Sbjct: 193 ERGREIPEFIEKNLKGDLSSCVLVVATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E+ KG+ITA  SVLV+
Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK-EENKGSITAFFSVLVE 311

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR+A    S  +       
Sbjct: 312 GDDLSDPIADQARSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKF 371

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435
             L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L   E  FQ++ +
Sbjct: 372 RRLYALLKENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLVQDENALQPFEQSFQQLEE 431

Query: 436 KLQ 438
            L+
Sbjct: 432 ILR 434


>gi|110915572|gb|ABH02574.1| ATP synthase beta subunit [Aira cupaniana]
          Length = 481

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 169/382 (44%), Gaps = 19/382 (4%)

Query: 54  KNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGK 111
           K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+
Sbjct: 40  KQHNVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGE 99

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G
Sbjct: 100 PVDNLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAG 158

Query: 172 IGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVV 220
           +GK+ L+     +       +S+ G   ER RE  +   +               K  +V
Sbjct: 159 VGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALV 218

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVA 279
               +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A
Sbjct: 219 YGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSA 278

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            GY  ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+
Sbjct: 279 VGYQPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLS 336

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G    
Sbjct: 337 RGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDEL 396

Query: 399 VDLILDKAVHQVPIIYDFLKQS 420
            +      V +   I  FL Q 
Sbjct: 397 SEED-RLTVARARKIERFLSQP 417


>gi|110915634|gb|ABH02605.1| ATP synthase beta subunit [Elymus trachycaulus]
 gi|110915662|gb|ABH02619.1| ATP synthase beta subunit [Littledalea tibetica]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910776|gb|ABI48120.1| ATPase beta subunit [Trichocolea tomentella]
          Length = 453

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G++ +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 15  GQDINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 74

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 75  EPVDNLGPVDAS-TSFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 133

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 134 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 193

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 194 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 253

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 254 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 311

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 312 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAISGLDE 371

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 372 LSEED-RLTVARARKIERFLSQP 393


>gi|7687984|emb|CAB89713.1| ATP synthase beta subunit [Hedyosmum arborescens]
          Length = 498

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLNVAFPPGKMPNINNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +ESP  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNESPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|9799480|gb|AAF98990.1| ATP synthase beta subunit [Crassula aff. perforata Fishbein 3778]
          Length = 487

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V        + + VV +G   D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVVFSPGNMPNIYNAVVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G ++  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTG-ITSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      + LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDXLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  F  Q 
Sbjct: 367 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFFSQP 425


>gi|296802112|gb|ADH51554.1| mitochondrial H+-transporting ATP synthase F1 complex beta
           polypeptide [Rousettus leschenaultii]
          Length = 479

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 193/431 (44%), Gaps = 24/431 (5%)

Query: 10  QLAEDYSKNLV------VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV- 62
           Q A DY+             G I ++      V        + + +  QG+++  + +V 
Sbjct: 14  QSARDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDTRLVLEVA 73

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
             +    V    +   E +  G  V   G   +I       GR++N +G+PID    + K
Sbjct: 74  QHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-K 132

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 I ++ P  M     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+   
Sbjct: 133 TKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMEL 192

Query: 182 ARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILR 231
             +         + + VGER RE  +   + +        D   K  +V    +E P  R
Sbjct: 193 INNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGAR 252

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 253 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 312

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP 
Sbjct: 313 GTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 370

Query: 351 VDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+ D      +   +   +  ++  ++  +DI  I G     +      V +
Sbjct: 371 VDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSR 429

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 430 ARKIQRFLSQP 440


>gi|294631411|ref|ZP_06709971.1| ATP synthase F1, alpha subunit [Streptomyces sp. e14]
 gi|292834744|gb|EFF93093.1| ATP synthase F1, alpha subunit [Streptomyces sp. e14]
          Length = 530

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 174/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    +  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAIVLGEFSGVEEGQPVTRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 DGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPVGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +         +   + + +V A + +    +
Sbjct: 188 INQRDNWRTGDPNKQVRCIYVAIGQKGSTIASVRRALEENGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKSQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ     +S+ED    +  
Sbjct: 425 GQRMVELLKQDQYQPMSTEDQVVSVWA 451


>gi|262376922|ref|ZP_06070149.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145]
 gi|262308267|gb|EEY89403.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145]
          Length = 464

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/430 (26%), Positives = 189/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MNSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG+PID    +   +  + I    P    +
Sbjct: 60  GLKRGLNVVNTGAPISVPVGTATLGRIMDVLGRPIDEAGPV-ATEARLPIHRSAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  S+ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARSVQNVLQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|224830558|gb|ACN66374.1| ATP synthase beta chain [Parabaena sagittata]
          Length = 489

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTTFPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|124361620|gb|ABN09252.1| ATP synthase beta subunit [Diospyros borneensis]
 gi|221078775|gb|ACL99462.1| ATP synthase beta subunit [Diospyros cf. ulo Duangjai et al. 021]
          Length = 465

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQTINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|85060392|ref|YP_456094.1| F0F1 ATP synthase subunit beta [Sodalis glossinidius str.
           'morsitans']
 gi|118573748|sp|Q2NQ86|ATPB_SODGM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|84780912|dbj|BAE75689.1| ATP synthase beta subunit [Sodalis glossinidius str. 'morsitans']
          Length = 460

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 182/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G +  +      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MATGNVIQVIGAVVDVEFPQDAVPKVYNALEVENGAAKLVLEVEQQLGGGVVRCIAMGSS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V    R   +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLKVTDLERAIEVPVGKATLGRIMNVLGEPVDMKGDIGEEE-RWSIHRPAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               +   +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LASSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVSRARKIQRFLSQP 404


>gi|291320297|ref|YP_003515559.1| ATP synthase subunit alpha [Mycoplasma agalactiae]
 gi|290752630|emb|CBH40603.1| ATP synthase alpha chain [Mycoplasma agalactiae]
          Length = 528

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/432 (24%), Positives = 179/432 (41%), Gaps = 19/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +D  +         + GYI +I      V  L      G+ V  +   
Sbjct: 1   MTSKSTDISAIIKDRIRRFDSKIDYSEIGYIVTIGDGIALVNGL-DNAKNGEIVKFKN-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
            +  G V+ +  ++V +   G    +S GDL    G    +       GRVINA+G PID
Sbjct: 58  -NITGLVLNLEEEVVGVAIFGDANMLSEGDLCTRTGEVIAVPVGDELTGRVINAIGNPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +       EI    P  M+R  V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGPINSTK-RREIFKVAPGVMSRVEVNEPLETGIIAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 S--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +   + ++  + D   K I   +G++   V +  +          + V+V+ + E    +
Sbjct: 176 TSIAIDTIINQKDKNVKCIYVAIGQKNSTVAQIAKKLQDSGAMEYTTVIVSGASELAPQQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   IAE + S+G + L+I D +++ A + R ++      P    YP  VF    
Sbjct: 236 YIAPYSGTAIAEEWMSEGKDCLIIYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER          G+ITA+  +     + +  I  +V SI DG I    +L   G+ P
Sbjct: 296 QLLERAAKVNYSYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTRENLFHSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A     K++ SSL   + ++ E +       +   +D      +  
Sbjct: 356 AVDVGFSVSRVGSSAQIKAMKEVSSSLKLELAQYNEMQ---AFAQFGSDLDDSTIAILKH 412

Query: 410 VPIIYDFLKQSP 421
              +Y+ LKQ  
Sbjct: 413 GHKVYELLKQEQ 424


>gi|183206636|gb|ACC54516.1| ATP synthase beta subunit [Siphocodon debilis]
          Length = 472

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+  D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTLGQPINVTCEVQQLLGNNRVRAVS 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKASGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|156530171|gb|ABU75182.1| AtpB [Samadera baileyana]
          Length = 459

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIR--------INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           +  D +GQ I         +  + V    +   + ++ G  V   G    +       GR
Sbjct: 11  RGRDTVGQPINMICEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|111283720|gb|ABH09210.1| ATPase beta subunit [Geocalyx caledonicus]
          Length = 449

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 11  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 70

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 71  EPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 129

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 130 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 189

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 190 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 249

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 250 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 307

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 308 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 367

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 368 LSEED-RLTVARARKIERFLSQP 389


>gi|56675678|emb|CAB63585.2| atp synthase beta subunit [Brassica balearica]
          Length = 499

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMDVVDMGNPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNXA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14717970|gb|AAK72727.1| ATP synthase beta subunit [Brassica balearica]
          Length = 475

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMDVVDMGNPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNXA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|323715468|gb|ADY04802.1| ATP synthase beta subunit [Deinanthe bifida]
          Length = 488

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPTVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|323715450|gb|ADY04793.1| ATP synthase beta subunit [Hydrostachys angustisecta]
          Length = 489

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINENNISESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 429


>gi|312285279|gb|ADQ64381.1| ATP synthase beta subunit [Tinomiscium petiolare]
          Length = 469

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQKINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A  Y  ++ +E+    ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVSYQPTLSTEMGSWQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|195183471|dbj|BAG66951.1| ATP synthase beta subunit [Allexis obanensis]
          Length = 489

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVVDTGAPLSVPVGGTTLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEANIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|91983087|gb|ABE68640.1| ATP synthase subunit B [Guamatela tuerckheimii]
          Length = 462

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|7708686|emb|CAB90021.1| ATP synthase beta subunit [Tricyrtis latifolia]
          Length = 490

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISS-ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +   I  V   +    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GRVEQXIGPVLDVIFPPGKMPNIYNALVVEG--RDTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|305671651|gb|ADM63135.1| ATP synthase beta subunit [Triplostegia glandulifera]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVACEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGNKHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|156622723|dbj|BAF76342.1| ATP synthase beta subunit [Piper kadsura]
          Length = 487

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G+  D  G+ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTAGKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|29726118|gb|AAD00586.2| ATP synthase beta subunit [Euptelea polyandra]
 gi|33327749|gb|AAQ09238.1| ATP synthase beta subunit [Euptelea polyandra]
          Length = 492

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GRVTQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D   ++     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGAVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G  P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXXPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPWIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|21633299|gb|AAM52124.1| ATP synthase beta subunit [Merremia dissecta]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAAISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|21633301|gb|AAM52125.1| ATP synthase beta subunit [Merremia aegyptia]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|12004111|gb|AAG43895.1|AF213764_1 ATP synthase beta subunit [Myrsine africana]
          Length = 486

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFSPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   D               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMDXXESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFMDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|183206644|gb|ACC54520.1| ATP synthase beta subunit [Rhigiophyllum squarrosum]
          Length = 480

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVS 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|183206544|gb|ACC54470.1| ATP synthase beta subunit [Campanula mollis]
          Length = 467

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 177/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|150035723|gb|ABR67207.1| ATP synthase beta subunit [Phragmites australis]
          Length = 472

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 104/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+PID
Sbjct: 35  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMQVIDTGAPLSVPVGGATLGRIFNVLGEPID 94

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 95  NLGPVDTS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 153

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 154 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 213

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 214 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 273

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 274 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 331

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 332 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 391

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 392 D-RLTVARARKIERFLSQP 409


>gi|190575942|ref|YP_001973787.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia K279a]
 gi|226740680|sp|B2FHY8|ATPB_STRMK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190013864|emb|CAQ47502.1| putative ATP synthase beta chain [Stenotrophomonas maltophilia
           K279a]
          Length = 468

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 188/414 (45%), Gaps = 20/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V    + V  + D +  +  N++   +V + +   +V    +G  
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRESVPKVYDALKVE--NTEITLEVQQQLGDGVVRTIALGST 58

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +    +  + GR   +   A   GR+++ LG+PID    +   D S EI    P   +
Sbjct: 59  DGLKRNLVAVNTGRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRAAPSYED 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + 
Sbjct: 118 QSPATELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D   
Sbjct: 178 VGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENG 237

Query: 254 ------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
                 L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 238 KGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  + L+RS+A  G YP VDPL S SR  D     
Sbjct: 296 TSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIG 355

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +       +   + +++E +DI  I G     +    +AV +   I  F  Q 
Sbjct: 356 HEHYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQAVSRARKIERFFSQP 408


>gi|124361608|gb|ABN09246.1| ATP synthase beta subunit [Diospyros andamanica]
          Length = 453

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|77918557|ref|YP_356372.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380]
 gi|118573499|sp|Q3A605|ATPB1_PELCD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|77544640|gb|ABA88202.1| ATP synthase F1 subcomplex beta subunit [Pelobacter carbinolicus
           DSM 2380]
          Length = 468

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 199/420 (47%), Gaps = 30/420 (7%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV------------CLGDFVVHQGKNSDNLGQV-IRINL 67
           +  G I+ +      V   +  +             LGD      +  + + +V   +  
Sbjct: 1   MSNGKITQVIGPVIDVEFEAGELPEIYYALKVSNPSLGD------EPWNLVAEVAQHLGE 54

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V + GR   +       GR++N +G+P+D    + + D + 
Sbjct: 55  NTVRAIAMDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPV-ETDTTW 113

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
           EI    P  +++    + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 114 EIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIHNIA 173

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  + + VGER RE  +   +    N+  K+ +V    +E P  R    L+A+T+A
Sbjct: 174 KKHGGFSVFAGVGERTREGNDLWNEMKESNVLDKTALVYGQMNEPPGARARVALSALTVA 233

Query: 243 EYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 234 EYFRDQENQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGELQERI--TT 291

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ 
Sbjct: 292 TKNGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSSSRIL 351

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      +  ++   + +++ R+++ +DI  I G     +    + V +   I  FL Q 
Sbjct: 352 DPQVLGEEHYQVARDVQYVLQRYKDLQDIIAILGMDELSEED-KQTVSRARKIQRFLSQP 410


>gi|323715432|gb|ADY04784.1| ATP synthase beta subunit [Mastixia euonymoides]
          Length = 474

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 414


>gi|225028203|ref|ZP_03717395.1| hypothetical protein EUBHAL_02475 [Eubacterium hallii DSM 3353]
 gi|224954515|gb|EEG35724.1| hypothetical protein EUBHAL_02475 [Eubacterium hallii DSM 3353]
          Length = 464

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 189/408 (46%), Gaps = 14/408 (3%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNL-GQ-VIRINLDIVYICPVGIGE 79
            G I+ +      +         + D V  + K+   L  +    +  DI+    +G  +
Sbjct: 6   TGKITQVIGAVLDIRFDQGVLPEINDAVEIRRKDGSKLVAETAQHLGDDIIRCIAMGPTD 65

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G      G    +       GR+ N LG+PID    + +G     I  K P    +
Sbjct: 66  GLVRGMEAIATGGPITVPVGEVTLGRIFNVLGEPIDKK-PVPEGVKRNPIHRKAPTFAEQ 124

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   V
Sbjct: 125 ATETEILETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNVATEHGGYSVFTGV 184

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   +      + K+ +V    +E P  R    LT +TIAE F  +G  +VL
Sbjct: 185 GERTREGNDLYTEMSESGVIDKTAMVFGQMNEPPGARMRVGLTGLTIAENFRDEGGKDVL 244

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 245 LFIDNIFRFTQAGSEVSALLGRVPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAV 302

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+R++ E+G YP VDPL S SR+ D      +  ++
Sbjct: 303 YVPADDLTDPAPATTFAHLDATTVLSRAIVEQGIYPAVDPLESTSRILDPRIVGEEHYQV 362

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 363 ARGVQEILQRYKELQDIIAILGMDELSEEE-KVLVARARKVQRFLSQP 409


>gi|186886225|gb|ACC93515.1| ATPase F1 alpha subunit [Luzula sylvatica]
          Length = 345

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 15/341 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 4   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPIDGKGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 123 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 182

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 183 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 242

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 243 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 302

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           G  P ++   SVSR+   A     K++  SL   + ++ E 
Sbjct: 303 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREV 343


>gi|110915582|gb|ABH02579.1| ATP synthase beta subunit [Anthoxanthum odoratum]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61968207|gb|AAX57030.1| ATP synthase beta subunit [Antidesma alexiteria]
 gi|61968249|gb|AAX57051.1| ATP synthase beta subunit [Hieronyma oblonga]
          Length = 479

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|56675812|emb|CAC60248.2| ATP synthase beta subunit [Carpodetus serratus]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPEIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|12004135|gb|AAG43907.1|AF213776_1 ATP synthase beta subunit [Aegiceras corniculatum]
          Length = 487

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDMAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLHMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|17224793|gb|AAL37117.1| ATP synthase beta subunit [Pandanus tectorius]
          Length = 504

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 27  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 84

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 85  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 143

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 144 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 203

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 204 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 263

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 264 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 321

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 322 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 381

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 382 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 440


>gi|4063534|gb|AAC98325.1| ATP synthase beta subunit [Bursera inaguensis]
          Length = 456

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 25  GRDTVGQTINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 144 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 322 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKIERFLSQP 408


>gi|82470762|gb|ABB77414.1| HrcN [Pantoea stewartii subsp. stewartii]
          Length = 454

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 153/451 (33%), Positives = 246/451 (54%), Gaps = 20/451 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + L Q + ++ + L     + + G ++ I  +   + C      +GD  + Q   
Sbjct: 3   MDTLSQDLKQWSLNHQQRLARYKPIRRYGKVTGINGIL--IECSLPGARIGDLCLIQRSE 60

Query: 56  SD-NLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPI 113
            D  L +++  + + + +  +G  + IS G L+        I  S    G V++  G+ +
Sbjct: 61  GDAVLSEIVGFSAEHILLSALGALDGISQGALITPLYLPHSICVSERLMGSVLDGFGRAL 120

Query: 114 DGDDSLGKGD-----LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +        +      ++ +++  PP   R R++    TG+R ID    +  GQR+GVFA
Sbjct: 121 EPGGYSAFAEPGLQCTTVPVLNDAPPPTERPRIDTVLPTGLRAIDGLLTIGKGQRVGVFA 180

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDES 227
           G+G GK+TLL+  AR+   D ++  L+GERGRE+REF+  +      K+++++ ATSD S
Sbjct: 181 GAGCGKTTLLAELARNSPCDVIVFGLIGERGRELREFLDHELDDTLRKRTILLCATSDRS 240

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A  TA  IAE F ++G +VLLI+DS+TRFA + REI    GE P   G P SV+
Sbjct: 241 SMERARAAFTATAIAEAFRAEGKSVLLIIDSLTRFARAQREIGLALGEPPGRGGLPPSVY 300

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           + LPRL+ER G  +  KG ITA+ SVL++ D+  DP+AD VRS++DGHIVL+R LAE   
Sbjct: 301 TLLPRLVERAG--QTRKGAITALYSVLIEQDSMGDPVADEVRSLIDGHIVLSRRLAERNH 358

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D LAS+SR           K V ++  LI  +++   +  +G Y+PG D++ D AV
Sbjct: 359 YPAIDILASLSRTMSNVVDQVHLKQVGNIRSLIAAYKQVEVLIRLGEYQPGHDILTDAAV 418

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +    I  FL+Q+   + + + F+ I  +L 
Sbjct: 419 NANDTINHFLRQT---MRTPEPFEHILSQLN 446


>gi|183206534|gb|ACC54465.1| ATP synthase beta subunit [Lobelia cardinalis]
          Length = 488

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/421 (27%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D LGQ I +  ++        V   
Sbjct: 11  GRIGQIIGPVLDVAFPPGKMPYIYNALVV---KGRDTLGQPIHVTCEVQQLLGNNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 68  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 127 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 187 SVFGGVGERTREGNDLYKEMRESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 305 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   +   S+   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 365 LQPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|219552264|gb|ACL26847.1| ATP synthase beta chain [Flueggea suffruticosa]
 gi|219552270|gb|ACL26850.1| ATP synthase beta chain [Margaritaria indica]
 gi|219552272|gb|ACL26851.1| ATP synthase beta chain [Margaritaria discoidea]
          Length = 423

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|242280912|ref|YP_002993041.1| ATP synthase F1, beta subunit [Desulfovibrio salexigens DSM 2638]
 gi|242123806|gb|ACS81502.1| ATP synthase F1, beta subunit [Desulfovibrio salexigens DSM 2638]
          Length = 467

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/415 (27%), Positives = 191/415 (46%), Gaps = 17/415 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS----DNLGQV-IRINLDIVYI 72
           +    G I  +      V     Q   +   V     N+    D + +V   +  ++V  
Sbjct: 1   MSKVSGKIVQVIGAVVDVEFPEGQLPNILTAVEIDNPNNTDAPDLVCEVAQHLGDNVVRT 60

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR++N +G+P+D    +   + S+ I   
Sbjct: 61  IAMDATEGLVRGMEVVATGKSISVPVGDGVLGRILNVVGRPVDEMGPIDAKE-SLPIHRA 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P    +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +       
Sbjct: 120 APEFTEQSTKVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGG 179

Query: 191 --IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
               + VGER RE  +   +     + +KS +V    +E P  R    LTA+TIAEYF  
Sbjct: 180 KSCFAGVGERTREGNDLYHEMKDAGVLEKSALVYGQMNEPPGARARVALTALTIAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
              ++VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+
Sbjct: 240 VEGEDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERI--TSTNKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNIL 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +       +  ++ ++++ +DI  I G     D    + V +   I  FL Q 
Sbjct: 358 GVEHYNTAREVQMVLQKYKDLQDIIAILGMDELSDED-KQTVARARRIQRFLSQP 411


>gi|156530179|gb|ABU75186.1| AtpB [Samadera sp. C-Ford 4679]
          Length = 497

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I         +  + V    
Sbjct: 20  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMICEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDNKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|156622721|dbj|BAF76341.1| ATP synthase beta subunit [Ceratophyllum demersum]
          Length = 488

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTKSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|42559020|gb|AAS20196.1| ATP synthase beta subunit [Ecdeiocolea monostachya]
          Length = 477

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 174/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GK  +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 36  GKQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLG 95

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 96  EPVDSLGPVDTS-ATFPIHRSAPAFIELDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGA 154

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +  ++               K  +
Sbjct: 155 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEKNLAESKVAL 214

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P 
Sbjct: 215 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPS 274

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 275 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 332

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +   S+   + R++E +DI  I G   
Sbjct: 333 SRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQSVKQTLQRYKELQDIIAILGLDE 392

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 393 LSEED-RLTVARARKIERFLSQP 414


>gi|4995179|emb|CAB44030.1| H(+)-transporting ATP synthase [Gossypium hirsutum]
          Length = 476

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/419 (26%), Positives = 183/419 (43%), Gaps = 29/419 (6%)

Query: 25  YISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPV 75
            IS I      V     +   + + +V +G+  D  GQ I +  ++        V    +
Sbjct: 1   RISQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P 
Sbjct: 59  SATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPA 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 118 FIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 177

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 178 FGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAE 237

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 238 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TST 295

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 296 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 355

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 PRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|320582839|gb|EFW97056.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia angusta DL-1]
          Length = 503

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/431 (26%), Positives = 188/431 (43%), Gaps = 22/431 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
             G I ++      V          L    + QG N   + +V   +  + V    +   
Sbjct: 33  ASGKIRAVIGAVVDVQFEQGELPAILNALTIDQGNNQKLVLEVAQHLGENAVRAIAMDGT 92

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G    +       GR+IN +G+PID    + +      I +  P  + 
Sbjct: 93  EGLVRGQTVVDTGAPISVPVGRGTLGRIINVVGEPIDERGPI-ECKQRNPIHADPPSFVE 151

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   
Sbjct: 152 QSTEAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG 211

Query: 195 VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +
Sbjct: 212 VGERTREGNDLYREMKETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDE 271

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG++
Sbjct: 272 EGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTRKGSV 329

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWS 366
           T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D     
Sbjct: 330 TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVSVVG 389

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   + + +   +  ++  +DI  I G     +      V +   I  FL Q     + 
Sbjct: 390 QEHYDVATGVQQTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FAV 445

Query: 427 EDVFQEITKKL 437
            +VF  I  KL
Sbjct: 446 AEVFTGIEGKL 456


>gi|300115592|ref|YP_003762167.1| ATP synthase F1 subunit beta [Nitrosococcus watsonii C-113]
 gi|299541529|gb|ADJ29846.1| ATP synthase F1, beta subunit [Nitrosococcus watsonii C-113]
          Length = 458

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+P+D    +G+ +
Sbjct: 45  LGDGVVRTIAMGGSDGLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGPIGEEE 104

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 105 -RWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +     +  K  +V    +E P  R    LT +
Sbjct: 164 NIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLDKVSLVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE+F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 224 TMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 281

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR
Sbjct: 282 TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSR 341

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++  ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 342 QLDPLIVGQEHYQVARAVQGNLQRYKELKDIIAILGMDELSEED-KLTVSRARKIQRFLS 400

Query: 419 QS 420
           Q 
Sbjct: 401 QP 402


>gi|111283724|gb|ABH09212.1| ATPase beta subunit [Trichotemnoma corrugatum]
          Length = 452

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 14  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 73

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 74  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 132

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 133 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 192

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 193 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 252

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 253 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 310

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 311 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 370

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 371 LSEED-RLTVARARKIERFLSQP 392


>gi|37720987|gb|AAN32496.1| ATP synthase beta subunit [Molineria capitulata]
          Length = 497

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34499998|gb|AAQ73581.1| ATP synthase beta subunit [Mannheimia sp. P373]
          Length = 444

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGSSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P    +
Sbjct: 59  GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 ANSTEFLETGIKVIDLVPPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  +   E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTFAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LV 373
           V  D+  +P   +  + LD  +VL+R++A  G YP VDPL S SR  D     +E   + 
Sbjct: 296 VPADDLTEPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 356 RGVQGTLQRYKELKDIIAILGMDELSEDD-KRLVARARKIERFLSQP 401


>gi|24940178|emb|CAD43395.1| ATP synthase beta subunit [Echiochilon kotschyi]
          Length = 484

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMEVVDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 423


>gi|5758875|gb|AAD50849.1| ATP synthase beta subunit [Dasypogon bromeliifolius]
          Length = 496

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|295065735|ref|YP_003587675.1| ATP synthase CF1 beta subunit [Anomochloa marantoidea]
 gi|251765259|gb|ACT15413.1| ATP synthase CF1 beta subunit [Anomochloa marantoidea]
          Length = 498

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      VT    +   + + +V + +++         +V ++  +  V    + 
Sbjct: 21  GRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTASKQITVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 377

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|221078787|gb|ACL99468.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078789|gb|ACL99469.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078791|gb|ACL99470.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078793|gb|ACL99471.1| ATP synthase beta subunit [Diospyros vieillardii]
 gi|221078795|gb|ACL99472.1| ATP synthase beta subunit [Diospyros vieillardii]
          Length = 465

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|37721009|gb|AAN32507.1| ATP synthase beta subunit [Allium textile]
          Length = 497

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV      D  GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVVFPRGKMPNIYNALVVI---GRDTAGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|75330506|sp|Q8MBQ1|ATPB_IPOAQ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633257|gb|AAM52103.1| ATP synthase beta subunit [Ipomoea aquatica]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVSDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|327394268|dbj|BAK11690.1| flagellum-specific ATP synthase FliI [Pantoea ananatis AJ13355]
          Length = 453

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 154/421 (36%), Positives = 226/421 (53%), Gaps = 15/421 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ----VIRINLDIVYICPV 75
           + + G ++  T +    T L   + LG   V +  +  ++ +    V+  N   + + P+
Sbjct: 25  IRRYGRLTRATGLVLEATGL--QLPLGSTCVIERNDGKSISEIESEVVGFNGQKLLMMPL 82

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCG-------RVINALGKPIDGDDSLGKGDLSMEI 128
              + I  G  V+         +            RV++  G+P+DG  S   G     +
Sbjct: 83  EEVDGILPGARVYARATGENPQAGKQLLLGPQLLGRVLDGSGRPLDGLPSPETG-YRAAL 141

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +     + R  +     TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    D
Sbjct: 142 NTPPFNPLQRTPITDVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQAD 201

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F  
Sbjct: 202 VIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRLQGAAYATRIAEDFRD 261

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+I
Sbjct: 262 RGKHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIDGGGSI 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR        
Sbjct: 322 TAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTSLIDE 381

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +    V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + S  
Sbjct: 382 NHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDPMLDKAIQLYPQMEAFLQQGIFERSEY 441

Query: 428 D 428
           D
Sbjct: 442 D 442


>gi|297618429|ref|YP_003703588.1| ATP synthase F1 subunit beta [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146266|gb|ADI03023.1| ATP synthase F1, beta subunit [Syntrophothermus lipocalidus DSM
           12680]
          Length = 476

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/363 (28%), Positives = 177/363 (48%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  DIV    V   + +  G      G   ++       GR++N +G P+D    +   +
Sbjct: 60  LGNDIVRCVAVQPTDGVMRGMKAVATGAPIKVPVGPATLGRILNVVGNPVDELGPVDATE 119

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              EI  K P  +++    +  +TG++V+D+  P   G ++G+F G+G+GK+ ++    R
Sbjct: 120 Y-WEIHRKPPALVDQVPSREMLETGVKVLDLICPYAKGGKVGMFGGAGVGKTVIIMELIR 178

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +  ++    S+   VGER RE  +   +      ++K  ++    +E P  R    LT +
Sbjct: 179 NIAYEHGGYSVFTGVGERSREGNDLWNEMKESGVIEKCALIYGQMNEPPGARLRVGLTGL 238

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VL+ +D+I RFA +  E++   G +P A GY  ++ +++  L ERI 
Sbjct: 239 TVAEYFRDVEGQDVLIFIDNIFRFAQAGNEVSALLGRMPSAVGYQPTLATDMGLLQERI- 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+  +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S
Sbjct: 298 -TSTKKGSITSAQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTS 356

Query: 359 RLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  +    +  ++ R++E +DI  I G     D      V +   I  FL
Sbjct: 357 RILDPLVLGKEHYECARGVQKVLQRYKELQDIIAILGMDELTDED-KLIVARARKIQRFL 415

Query: 418 KQS 420
            Q 
Sbjct: 416 SQP 418


>gi|237751983|ref|ZP_04582463.1| ATP synthase subunit beta [Helicobacter winghamensis ATCC BAA-430]
 gi|229376550|gb|EEO26641.1| ATP synthase subunit beta [Helicobacter winghamensis ATCC BAA-430]
          Length = 467

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/409 (28%), Positives = 192/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I  +      V   S    + + +       G++   + +V     D  V    + + 
Sbjct: 3   GKIIQVMGPVVDVDFESYLPAINEALDIDFEIDGQSRKLVLEVAAHIGDNRVRAIAMDMT 62

Query: 79  EEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G+ V        +       GR+ N  G  IDG + L   +    I    P   N
Sbjct: 63  EGLTRGEKVSARGNPITVPVGEQVLGRIFNVTGDVIDGGEELNNPE-KWSIHRSAPTFEN 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + +S+  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 VATSVQQVLQKYKDLQDIIAILGMDELSEED-KKVVERARKIEKFLSQP 407


>gi|183206642|gb|ACC54519.1| ATP synthase beta subunit [Campanula lactiflora]
          Length = 466

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQNFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|208751250|gb|ACI31230.1| ATP synthase CF1 beta subunit [Volvox carteri]
 gi|261888140|gb|ACY05995.1| ATP synthase CF1 beta subunit [Volvox carteri f. nagariensis]
          Length = 491

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I  I   V   V    Q   + + +  + KN+         +V ++  D  V    + 
Sbjct: 21  GRIVQIIGPVLDIVFAKGQVPNIYNALTIRAKNAAGQEMAVTCEVQQLLGDNSVRAVSMN 80

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I    P  
Sbjct: 81  PTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 140 VDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 AGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 318 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQP 377

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +       S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 WIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLSQP 434


>gi|17367090|sp|Q9TMV0|ATPB_BEARE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5758856|gb|AAD50830.1| ATP synthase beta subunit [Beaucarnea recurvata]
          Length = 495

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|226947193|ref|YP_002802266.1| F0F1 ATP synthase subunit beta [Azotobacter vinelandii DJ]
 gi|226722120|gb|ACO81291.1| ATP synthase F1, beta subunit [Azotobacter vinelandii DJ]
          Length = 458

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 188/408 (46%), Gaps = 14/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDQVPNVYDALKVEGAQTTLEVQ-QQLGDGVVRSIAMGSTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG PID    +G+ +    I    P    +
Sbjct: 60  GLKRGLNVNNTGAGIAVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RWTIHRAAPTYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIVMEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +     
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
             + +++ R++E +DI  I G         DK  V +   I  FL Q 
Sbjct: 357 RGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVSRARKIQRFLSQP 402


>gi|254719787|ref|ZP_05181598.1| F0F1 ATP synthase subunit beta [Brucella sp. 83/13]
 gi|265984806|ref|ZP_06097541.1| ATP synthase subunit beta [Brucella sp. 83/13]
 gi|306839484|ref|ZP_07472292.1| ATP synthase F1, beta subunit [Brucella sp. NF 2653]
 gi|306841512|ref|ZP_07474211.1| ATP synthase F1, beta subunit [Brucella sp. BO2]
 gi|264663398|gb|EEZ33659.1| ATP synthase subunit beta [Brucella sp. 83/13]
 gi|306288423|gb|EFM59780.1| ATP synthase F1, beta subunit [Brucella sp. BO2]
 gi|306405429|gb|EFM61700.1| ATP synthase F1, beta subunit [Brucella sp. NF 2653]
          Length = 521

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 184/411 (44%), Gaps = 19/411 (4%)

Query: 25  YISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           +I+ +      V     Q   + + +    +    + +V   +  D V    +   E + 
Sbjct: 54  HITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLV 113

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR++N +G+P+D    + K   +  I    P  + +   
Sbjct: 114 RGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTKATRAIHQSAPEYIEQSTE 172

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 173 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 233 TREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 293 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      + 
Sbjct: 351 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEH 410

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 411 YAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 460


>gi|242241509|ref|ZP_04795954.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis W23144]
 gi|242235052|gb|EES37363.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis W23144]
 gi|319399587|gb|EFV87842.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis FRI909]
          Length = 470

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/410 (27%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH------QGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V   +  +H       G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPEINNALHIEVPKEDGTLQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   GR   +       GRV N LG+ ID D+ +        I  + P   
Sbjct: 64  TDGVQRGMEVKDTGRDISVPVGDVTLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  S   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATTFAHLDSTTNLERKLTEMGIYPAVDPLASTSRALEPSVVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 DVAREVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|183206620|gb|ACC54508.1| ATP synthase beta subunit [Heterocodon rariflorum]
          Length = 484

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      +     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 7   GRIGQIIGPVLDIAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 65  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTLTTS-PIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|182677217|ref|YP_001831363.1| F0F1 ATP synthase subunit beta [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633100|gb|ACB93874.1| ATP synthase F1, beta subunit [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 482

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 189/441 (42%), Gaps = 26/441 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICP 74
              L    G+I+ +      V        + + +  Q   +  + +V   +    V    
Sbjct: 3   DAALNGPTGHITQVIGAVIDVKFDGHLPAILNALETQNNGNRLVLEVAQHLGESEVRCIA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           + + + +  G  V   G    +       GR++N +G+P+D    +        I    P
Sbjct: 63  MDVTDGLIRGQAVIDTGAPISVPVGEECLGRILNVIGEPVDELGPVNTT-ARRAIHQLAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +    +   TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         
Sbjct: 122 AYDEQSTEAQILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELINNIAKAHGGYS 181

Query: 191 IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLT 237
           + + VGER RE  +   + +  ++              K  +V    +E P  R    L+
Sbjct: 182 VFAGVGERTREGNDLYHEMIESHVNVDPHEHGGSAKGSKCALVYGQMNEPPGARARVALS 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +TIAE F  KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI
Sbjct: 242 GLTIAEDFRDKGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +   KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S 
Sbjct: 302 --TTTTKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDST 359

Query: 358 SRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+       +E   +   +  L+ R++  +DI  I G     +      V +   I  F
Sbjct: 360 SRILSPLIVGEEHYNVARQVQQLLQRYKSLQDIIAILGMDELSEED-KLTVARARRIERF 418

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L Q        ++F     KL
Sbjct: 419 LSQP---FHVAEIFTGSPGKL 436


>gi|21633329|gb|AAM52139.1| ATP synthase beta subunit [Convolvulus sagittatus]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVINTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|331695532|ref|YP_004331771.1| ATP synthase subunit alpha [Pseudonocardia dioxanivorans CB1190]
 gi|326950221|gb|AEA23918.1| ATP synthase subunit alpha [Pseudonocardia dioxanivorans CB1190]
          Length = 547

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 96/454 (21%), Positives = 179/454 (39%), Gaps = 28/454 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  + E +      Y  +L  Q      G +         V  L       + +  +G  
Sbjct: 4   LTISPEEIRSAISSYVSSLESQTSREEVGAVVDTGDGIAHVEGL-PSAMTNELLEFEGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G  + ++  ++    +G    I  G  V        +     + GRVI+ LG  ID
Sbjct: 62  --VRGVALNLDQRVIGAVVLGDYAGIEEGQPVRRTNSILSVPVGDGFLGRVIDPLGNAID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + +  +    + RQ V++  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 120 GLGDIEAEEQRV-LELQAASVVERQSVKEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                 T+++        D     + I   +G++G  +    +        + + +V A 
Sbjct: 179 TAVCVDTIINQKDNWASGDPAKQVRCIYVAIGQKGSTIAGVRQALEDAGALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +    + +AP T   + +++  +G +VL++ D +++ A + R I+      P    YP
Sbjct: 239 ASDPAGFKWLAPYTGSALGQHWMYQGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDELGGGSMTGLPIIETKANDVSAYIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A     + +  SL   + ++ E       G     +D 
Sbjct: 359 LFNQGVRPAINVGISVSRVGGSAQVRAMRTVSGSLRLDLSQYRELEAFAAFG---SDLDD 415

Query: 402 ILDKAVHQVPIIYDFLKQSP-SDLSSEDVFQEIT 434
              +A+ +   + + LKQ+  S  S ED    I 
Sbjct: 416 ASARALGRGERLVELLKQAQYSPFSVEDEVVAIW 449


>gi|323715482|gb|ADY04809.1| ATP synthase beta subunit [Philadelphus californicus]
          Length = 486

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|159106871|ref|YP_001531290.1| ATP synthase CF1 beta subunit [Lolium perenne]
 gi|190358678|sp|A8Y9H7|ATPB_LOLPR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|158934405|emb|CAO85983.1| ATP synthase CF1 beta subunit [Lolium perenne]
          Length = 498

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQ-----GKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q      K  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSIDTANKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|159161167|ref|YP_001542454.1| ATP synthase CF1 beta subunit [Ceratophyllum demersum]
 gi|190358277|sp|A8SEB0|ATPB_CERDE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148508450|gb|ABQ81457.1| ATP synthase CF1 beta subunit [Ceratophyllum demersum]
 gi|227481126|emb|CAP62505.1| ATPase beta subunit [Ceratophyllum demersum]
          Length = 498

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTKSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|138277481|gb|AAQ09243.2| ATP synthase beta subunit [Phytolacca americana]
          Length = 495

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 48  KGRDTAGQPINVXCEVQQLLGNNRVRAVAMSATDGLTRGMEVSDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|159045474|ref|YP_001534268.1| F0F1 ATP synthase subunit beta [Dinoroseobacter shibae DFL 12]
 gi|190358233|sp|A8LJR4|ATPB2_DINSH RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|157913234|gb|ABV94667.1| ATP synthase subunit beta [Dinoroseobacter shibae DFL 12]
          Length = 474

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +  +      + +V   +  + V    +   E + 
Sbjct: 6   GKVTQVIGAVVDVQFEDTLPEILNALNTENNGKKLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    I       GR++N +G+PID    +   + S  I    P    +   
Sbjct: 66  RGAEVTDTGGPITIPVGNATLGRIMNVIGEPIDEKGPVEASE-SRAIHQPAPEFSEQSTG 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKGGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPGIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|112791372|gb|ABI21956.1| ATP synthase beta subunit [Brenneria nigrifluens]
          Length = 421

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           D +  +      + +V + +   +V    +G  + +  G  V + G    +       GR
Sbjct: 3   DALEVENGAEKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLKVTNQGHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ D    I  + P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGDIGEED-RWAIHREAPSYEELSSSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EDD-KLVVSRARKIQRFLSQP 379


>gi|32815667|gb|AAP88230.1| ATP synthase beta subunit [Hamamelis japonica]
          Length = 457

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTVGQQINVTCEVQQLLGNNRVKAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|55056886|emb|CAF21944.1| ATP synthase beta subunit [Gnetum gnemon]
          Length = 447

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/401 (25%), Positives = 174/401 (43%), Gaps = 24/401 (5%)

Query: 40  SQYVCLGDFVVHQGKNSDN-----LGQVIRINLDI-VYICPVGIGEEISLGDLVFHWGR- 92
            Q   + + ++ +G+  D        +V ++  +  V    +   + ++ G  V + G  
Sbjct: 10  GQSANIYNXLIVKGQKDDRAFSXVTCEVQQLLGNNTVRAVAMSATDGLTRGMKVINTGAC 69

Query: 93  FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
             +       GR+ N LG+P+D    +   D +  I    P           F+TGI+V+
Sbjct: 70  LSVPVGKATLGRIFNVLGEPVDNLGPVD-TDTTFPIHRPAPAFPQLDTNLSIFETGIKVV 128

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDY 209
           D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   + 
Sbjct: 129 DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEM 188

Query: 210 LGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260
                         K  +V    +E P  R          AEYF      +VLL +D+I 
Sbjct: 189 KESGVINEKNIAESKVALVYGQMNEPPGARMRVGXLPXAKAEYFRDVNDQDVLLFIDNIF 248

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+ 
Sbjct: 249 RFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDL 306

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHL 379
            DP   +  + LD   VL+R LA +G YP VDPL S S +       +   ++   +   
Sbjct: 307 TDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGEQHYEIAQGVKQT 366

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 LQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 406


>gi|332529017|ref|ZP_08404983.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624]
 gi|332041567|gb|EGI77927.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624]
          Length = 471

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 185/418 (44%), Gaps = 18/418 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
             N  VQG  +  I +V            + D +  +G       Q  ++   +V    +
Sbjct: 3   QANTQVQGKIVQCIGAVVDVEFPRDHMPKVYDALKMEGSALTLEVQ-QQLGDGVVRTIAL 61

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G+   +       GR+++ LG PID    + +   +  I  K P 
Sbjct: 62  GSSDGLRRGLMVTNTGKAITVPVGKATLGRIMDVLGNPIDERGPVAQT-QTASIHRKAPA 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                  ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 121 YDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 180

Query: 192 ISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +F  +               K  +V    +E P  R    LT +T+AE
Sbjct: 181 FAGVGERTREGNDFYHEMSDAGVVNQESLGDSKVAMVYGQMNEPPGNRLRVALTGLTMAE 240

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  +
Sbjct: 241 AFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 299 VGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                D      ++   + R++E RDI  I G    +       V +   I  FL Q 
Sbjct: 359 QVVGEDHYTTARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLTVARARKIQRFLSQP 415


>gi|311113393|ref|YP_003984615.1| ATP synthase F1 sector subunit alpha [Rothia dentocariosa ATCC
           17931]
 gi|310944887|gb|ADP41181.1| ATP synthase F1 sector alpha subunit [Rothia dentocariosa ATCC
           17931]
          Length = 541

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 90/421 (21%), Positives = 167/421 (39%), Gaps = 23/421 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
           +     V  L   V   + +  +      LG    ++   + +  +G    I  G  V  
Sbjct: 39  SDGIARVEGL-PSVMANELLRFEDG---TLGLAQNLDTRDIGVIILGDFTGIEEGQPVHR 94

Query: 90  WGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +     + GRV++ LG PID    + K +    +  + P    R+ V +  +TG
Sbjct: 95  TGEVLSVPVGEAYLGRVVDPLGNPIDDLGPI-KDEGRRALELQAPGVTQRKSVHEPLQTG 153

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGER 198
           ++ ID   P+  GQR  +      GK      T+L+  A  +  D     + +   VG++
Sbjct: 154 LKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTILNQKANWETGDPSKQVRCVYVAVGQK 213

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              +             + + +V A + ++   + +AP T   I +++   G +VL+I D
Sbjct: 214 ASTIAAVRHTLETRGALEYTTIVAAPASDAAGFKYLAPYTGSAIGQHWMYGGKHVLIIFD 273

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R ++      P    YP  VF    RLLER      E   G++T    +  
Sbjct: 274 DLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSMTGFPIIET 333

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
             ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A +   KK+  +
Sbjct: 334 KANDVSAFIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAQTKAMKKVSGT 393

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLSSEDVFQEIT 434
           L   + ++   R +     +   +D      + +   + + L+Q   +  + E+    I 
Sbjct: 394 LKLDLAQY---RAMEAFAMFASDLDDASKAQLTRGARLTELLRQPQYTPYAVEEQVVSIW 450

Query: 435 K 435
            
Sbjct: 451 A 451


>gi|195469417|ref|XP_002099634.1| ATPsyn-beta [Drosophila yakuba]
 gi|194185735|gb|EDW99346.1| ATPsyn-beta [Drosophila yakuba]
          Length = 505

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/454 (25%), Positives = 201/454 (44%), Gaps = 25/454 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           +  L  L QL+  ++           G I ++      V        + + +    ++  
Sbjct: 12  KNLLPFLGQLSRSHAAKAAKAAAAANGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPR 71

Query: 58  NLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
            + +V   +  + V    +   E +  G  V   G   RI   A   GR+IN +G+PID 
Sbjct: 72  LVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDE 131

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D +  I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+
Sbjct: 132 RGPID-TDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 190

Query: 176 TLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSD 225
            L+     +         + + VGER RE  +   + +        D   K  +V    +
Sbjct: 191 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMN 250

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 251 EPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 310

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE
Sbjct: 311 TLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAE 368

Query: 345 EGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G     +   
Sbjct: 369 LGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED- 427

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              V +   I  FL Q        +VF     KL
Sbjct: 428 KLTVARARKIQRFLSQP---FQVAEVFTGHAGKL 458


>gi|118573714|sp|Q3B6W8|ATPB1_PELLD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
          Length = 462

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/428 (26%), Positives = 192/428 (44%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +     +   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGSRL--VLETQQHLGEERVRTVAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + GR  +        GR++N +G PIDG   +     +  I    P 
Sbjct: 59  ESTDGLIRGLSVANTGRPIQAPVGEGVLGRMLNVVGDPIDGRGPVNATK-TYSIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVI 191
             +     + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         +
Sbjct: 118 FEDLSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-G 249
            + VGER RE  +   + +    + K+ +V    +E P  R    LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEH 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI  +  + G++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRI--TSTKNGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 S+  ++ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYDTAQSVKQILQRYKDLQDIIAILGMDELSDED-KLVVARARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|63091861|emb|CAH58781.1| ATP synthase alpha chain [Enterococcus mundtii]
 gi|63091913|emb|CAH58811.1| ATP synthase alpha chain [Enterococcus mundtii]
 gi|63091945|emb|CAH58830.1| ATP synthase alpha chain [Enterococcus mundtii]
          Length = 367

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDAMIGRVVNPLGQPIDGLGEIV-TDKTRPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|52082881|gb|AAU26021.1| ATPase beta subunit [Aristolochia gigantea]
          Length = 477

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQVNVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGTEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|15705382|gb|AAL05619.1| AtpB [Ceratophyllum submersum]
          Length = 487

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTKSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|21633441|gb|AAM52195.1| ATP synthase beta subunit [Dinetus truncatus]
          Length = 487

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 180/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKN--SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V      +       VV  G N  ++   +V ++  +  V    +   
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPYIYNALVVQGGDNEQTNVTCEVQQLLGNNRVRAVAMSDT 77

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    +   + +  I    P  + 
Sbjct: 78  DGLMRGLEVIDTGAPISVPVGGSTLGRIFNVLGKPVDNLGPVD-TNTTSPIHRSAPAFIQ 136

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 137 LDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 196

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 197 VGERTREGNDLYMEMKESGVINEETVAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 256

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 257 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 314

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 315 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 374

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|7708308|emb|CAB90082.1| ATP synthase beta subunit [Garrya elliptica]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDIAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGSTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6017826|gb|AAF01647.1| ATP synthase beta subunit [Coptis trifolia]
          Length = 478

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+  +  +  + + +V +G+  D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|27468618|ref|NP_765255.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis ATCC
           12228]
 gi|57867649|ref|YP_189274.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis RP62A]
 gi|251812184|ref|ZP_04826657.1| H(+)-transporting two-sector ATPase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876489|ref|ZP_06285355.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis SK135]
 gi|293366067|ref|ZP_06612755.1| ATP synthase F1 sector beta subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38604812|sp|Q8CNJ7|ATPB_STAES RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81170379|sp|Q5HMB9|ATPB_STAEQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27316165|gb|AAO05299.1|AE016749_245 ATP synthase beta chain [Staphylococcus epidermidis ATCC 12228]
 gi|57638307|gb|AAW55095.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis RP62A]
 gi|251804281|gb|EES56938.1| H(+)-transporting two-sector ATPase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294741|gb|EFA87269.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis SK135]
 gi|291319790|gb|EFE60148.1| ATP synthase F1 sector beta subunit [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726160|gb|EGG62632.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU144]
 gi|329734118|gb|EGG70436.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU045]
 gi|329735661|gb|EGG71944.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU028]
          Length = 470

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/410 (27%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH------QGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V   +  +H       G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPEINNALHIEVPKEDGALQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   GR   +       GRV N LG+ ID D+ +        I  + P   
Sbjct: 64  TDGVQRGMEVKDTGRDISVPVGDVTLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  S   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATTFAHLDSTTNLERKLTEMGIYPAVDPLASTSRALEPSVVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 DVAREVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|194033266|ref|YP_002000428.1| ATP synthase CF1 beta subunit [Oedogonium cardiacum]
 gi|156618960|gb|ABU88157.1| ATP synthase CF1 beta subunit [Oedogonium cardiacum]
 gi|186968883|gb|ACC97206.1| CF1 beta subunit of ATP synthase [Oedogonium cardiacum]
          Length = 482

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      +   +  V  + + +V +GKN+         +V ++  D  +    + 
Sbjct: 11  GSIVQIIGPVVDIIFPTGNVPNIYNALVIKGKNTAGQDMSVTCEVQQLLGDRCIRAVAMN 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    +       GR+ N LG+P+D    + + +  + I    P  
Sbjct: 71  PTEGLMRGMEVVDTGNPLLVPVGKDTLGRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            +       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 130 TDLDTRLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 193 SLVGERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 AGVGERTREGNDLYMEMKESKVIVEDNLGESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  S LD   VL+R LA +G YP VDPLAS S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D        +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 WIVGDAHYNCAQKVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 424


>gi|89242544|gb|ABD64630.1| ATPase beta subunit [Philodendron hederaceum var. oxycardium]
          Length = 436

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I++  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTVGQQIQVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|119503667|ref|ZP_01625750.1| ATPase FliI/YscN [marine gamma proteobacterium HTCC2080]
 gi|119460729|gb|EAW41821.1| ATPase FliI/YscN [marine gamma proteobacterium HTCC2080]
          Length = 477

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 163/442 (36%), Positives = 247/442 (55%), Gaps = 15/442 (3%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           + LE L++  +  +    V+ G +  ++ +   V  L     +G   + QGK      +V
Sbjct: 17  QRLEGLSEKLQAPNP---VETGQLVHLSGMRLEVAGLRSP--IGSRCLIQGK-VPVEAEV 70

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           I  + D + +   G  E +  G  V    G  RI       GRVI+  G+P+DG      
Sbjct: 71  IGFHGDRLVMMCEGSAEGLRPGARVEPLEGSDRIPVGPGLLGRVIDGAGRPLDGFSP-PT 129

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            D+++ +  +    M+R  ++K    GIR I+    +  GQRIG+FAGSG+GKSTLL M 
Sbjct: 130 SDITVPMQGEPLNPMDRGALQKPLDVGIRAINSLLTVARGQRIGLFAGSGVGKSTLLGMM 189

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
            R    D V++ LVGERGREVREF+ED LG + LKK+VVV   +D SP++R      A  
Sbjct: 190 TRFTEADVVVVGLVGERGREVREFVEDSLGPEGLKKAVVVATPADTSPLMRVAGCWRATA 249

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAEY+ ++G NVLL++DS+TRFA + REI   +GE PV+RGY  SVFS +P L+ER G  
Sbjct: 250 IAEYYRAQGLNVLLLVDSLTRFAQAQREIGLAAGEPPVSRGYTPSVFSLMPNLIERAGNL 309

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+ITAV +VL +GD+  DPIADS R+ILDGH+VL+R +A+ G +P +D  AS+SR 
Sbjct: 310 --GSGSITAVYTVLTEGDDLQDPIADSARAILDGHVVLSRKMADSGLFPAIDIEASISRA 367

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +     ++     +  +   ++  RD+  +G YR G D  +D A+     ++  ++Q 
Sbjct: 368 MLQITDDAQQAHARKVRDVYATYQANRDLIAMGAYRAGTDPQIDLAIRHHNAVHQLIEQP 427

Query: 421 PSDLSSEDV----FQEITKKLQ 438
               +S D       ++++ +Q
Sbjct: 428 LDQPASFDSSLSELAQVSEAMQ 449


>gi|119503557|ref|ZP_01625640.1| Sodium-transporting two-sector ATPase [marine gamma proteobacterium
           HTCC2080]
 gi|119460619|gb|EAW41711.1| Sodium-transporting two-sector ATPase [marine gamma proteobacterium
           HTCC2080]
          Length = 514

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 99/447 (22%), Positives = 179/447 (40%), Gaps = 30/447 (6%)

Query: 2   QKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS 56
           Q N   ++ +       L         G I S+T     +  L++ V  G+ +  QG   
Sbjct: 3   QLNPSEISDIIRQRIDQLDVTSQATNEGTIVSVTDGIIRIHGLNE-VQYGEMIEFQGG-- 59

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDG 115
              G  + +  D V    +G  ++++ G      GR   +       GRV++ALG PIDG
Sbjct: 60  -IFGLALNLERDSVGAVILGDYKQLAEGQTCRCTGRILEVPVGPALQGRVVDALGNPIDG 118

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             S+   +    I    P  + RQ V++  + G++ ID   P+  GQR  +     +GK+
Sbjct: 119 RGSIDTDETDA-IEKIAPGVIARQSVDQPVQIGLKAIDAMVPIGRGQRELIIGDRQVGKT 177

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
            +      +      K +   VG++   V   +           ++VV A + +   ++ 
Sbjct: 178 AIAVDAIINQKGTGIKCVYVAVGQKASSVAAVVRKLEEHGAMDHTIVVAANASDPAAMQF 237

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    T+ EY+  +G++ L+I D +++ A + R+I+      P    YP  VF    R
Sbjct: 238 LAPFAGCTMGEYYRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSR 297

Query: 293 LLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           LLER                   + G++TA+  +     + +  +  +V SI DG I L 
Sbjct: 298 LLERAARVNADYVEKFTDGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLE 357

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             +   G  P ++   SVSR+   A S   KKL   +   + ++ E   +     +   +
Sbjct: 358 ADMFNAGVRPAMNAGISVSRVGGAAQSKIVKKLSGGIRTALAQYRE---LAAFSQFASDL 414

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D      +     + + +KQ      S
Sbjct: 415 DDATKAQLDHGERVTELMKQKQYAPLS 441


>gi|33327763|gb|AAQ09245.1| ATP synthase beta subunit [Pittosporum verrucosum]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 19  IVPVLDVAFSTGKMANIYNALVVKGQ--DTVGQPINVACEVQQLLGNNRVRAVAMSATDG 76

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +  +
Sbjct: 77  LTRGMEVVDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLE 135

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 136 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 195

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 196 ERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 256 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 313

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 314 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 373

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 EEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21633355|gb|AAM52152.1| ATP synthase beta subunit [Hildebrandtia africana]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++++ +    +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQMNVACEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTKTTSX-IHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRXGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62902810|gb|AAY19320.1| ATP synthase beta subunit [Empleuridium juniperinum]
          Length = 488

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSTGKMPNIYNALVVKGRDTSGHTMNVICEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|221078781|gb|ACL99465.1| ATP synthase beta subunit [Diospyros umbrosa]
          Length = 465

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|226947380|ref|YP_002802471.1| ATP synthase F1, beta subunit [Clostridium botulinum A2 str. Kyoto]
 gi|254808140|sp|C1FQP5|ATPB_CLOBJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226842430|gb|ACO85096.1| ATP synthase F1, beta subunit [Clostridium botulinum A2 str. Kyoto]
          Length = 463

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
           +     +   + +V   I  D +    +   E +  G      G+   +       GR+ 
Sbjct: 31  LEINAGDRKVIAEVEQHIGDDTIRAIAMEDTEGLKRGMEALDTGKSVSVPVGKEVLGRLF 90

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LGKPIDG       + S  I    P    +    + F+TGI+VID+  P   G +IG+
Sbjct: 91  NVLGKPIDGAGEFI-SEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYEKGGKIGL 149

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+ L+     +   +     + + VGER RE  +   +     + +K+ +V  
Sbjct: 150 FGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEKTALVFG 209

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 210 QMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 269

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+RS+
Sbjct: 270 QPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSI 327

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E G YP VDPL S SR+ D      +  ++   + +++ R+ E +DI  I G     + 
Sbjct: 328 TELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAILGIDELSEE 387

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 388 D-KLVVGRARKIQRFLSQP 405


>gi|110915692|gb|ABH02634.1| ATP synthase beta subunit [Rostraria pubescens]
 gi|110915706|gb|ABH02641.1| ATP synthase beta subunit [Trisetum cernuum subsp. canescens]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  SAGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910796|gb|ABI48130.1| ATPase beta subunit [Schistochila nobilis]
          Length = 456

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/394 (27%), Positives = 174/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99
           +V +G+NS   GQ I +  ++        V    +   + +  G  V   G    +    
Sbjct: 9   LVVRGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAALSVPVGE 66

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P           F+TGI+V+D+  P  
Sbjct: 67  ATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 186 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDP  S S +        +  +    +   + R++E 
Sbjct: 304 TFAHLDATTVLSRGLAAKGIYPAVDPSDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 363

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QDIIAILGLDESSEED-RLTVARARKIERFLSQP 396


>gi|21684889|emb|CAD11571.1| ATP synthase beta subunit [Mesanthemum radicans]
          Length = 475

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 2   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTANQQINVICEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG PID    +     S  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGSPLSVPVGGTTLGRIFNVLGDPIDNLGPVDPSTTS-PIHRSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYIEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|7708501|emb|CAB89930.1| ATP synthase beta subunit [Morella cerifera]
          Length = 469

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V       + + + +V +G   D  GQ I +  ++        V    
Sbjct: 5   GRIVQIIGPVLDVAFPPGXMLNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLMRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|5758896|gb|AAD50870.1| ATP synthase beta subunit [Marantochloa atropurpurea]
          Length = 496

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7524659|ref|NP_042413.1| ATP synthase CF1 beta subunit [Pinus thunbergii]
 gi|1168580|sp|P41622|ATPB_PINTH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1262653|dbj|BAA04370.1| H+-ATPase beta subunit [Pinus thunbergii]
 gi|228016394|gb|ACP51227.1| ATP synthase CF1 beta subunit [Pinus thunbergii]
          Length = 492

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S ++    G I+ I      V+     +  + + ++ +G+ +   
Sbjct: 1   MRKNPLVLG-----VSASVETNVGRIAQIIGPVLDVSFPPGNMPNIYNSLIVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|21223731|ref|NP_629510.1| F0F1 ATP synthase subunit alpha [Streptomyces coelicolor A3(2)]
 gi|256785176|ref|ZP_05523607.1| F0F1 ATP synthase subunit alpha [Streptomyces lividans TK24]
 gi|289769069|ref|ZP_06528447.1| ATP synthase F1, alpha subunit [Streptomyces lividans TK24]
 gi|81622855|sp|Q9K4D5|ATPA_STRCO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|8568793|emb|CAB94542.1| ATP synthase alpha chain [Streptomyces coelicolor A3(2)]
 gi|289699268|gb|EFD66697.1| ATP synthase F1, alpha subunit [Streptomyces lividans TK24]
          Length = 529

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 173/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGCVVLGEFSGIEEGQPVSRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 SGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +         +   + + +V A + +    +
Sbjct: 188 INQRDNWRTGDPNKQVRCIYVAIGQKGSTIASVRGALEENGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER       +G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDAEGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKSQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ+    +S+ED    +  
Sbjct: 425 GQRMVELLKQNQYQPMSTEDQVVSVWA 451


>gi|305671695|gb|ADM63157.1| ATP synthase beta subunit [Sambucus caerulea]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATEGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYDTAQMVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|222356610|gb|ACM48835.1| ATPase alpha subunit [Afrothismia gabonensis]
          Length = 376

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 152/377 (40%), Gaps = 24/377 (6%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GD V   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLEKENVGIVVFGSDTAIKDGDPVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L        +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LASDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 120

Query: 179 SMFARS-----------------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220
                +                 +     +   +G++   V + ++     +  + ++++
Sbjct: 121 IDTILNQNIPPRAHHPEALLGTSETSVYCVYVAIGQKRSTVAQLVQILPEAHAFEYTILL 180

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
            AT+ +   L  +AP +   + EYF  K  + L+I D +++ A + R+++      P   
Sbjct: 181 AATASDPAPLLFLAPYSGCAMGEYFRDKSMHALIIYDDLSKQAVAYRQMSLLLRRPPGRE 240

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I DG I  
Sbjct: 241 AFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICS 300

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P ++   SVSR+   A S   K++  S    + ++ E   +     +   
Sbjct: 301 ETELFYRGLRPAINVGLSVSRVGSAAQSRAMKQVCGSSKLELAQYRE---VAAFAQFGSD 357

Query: 399 VDLILDKAVHQVPIIYD 415
           +D      +++   + +
Sbjct: 358 LDAATQALLNRGARLTE 374


>gi|254486561|ref|ZP_05099766.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101]
 gi|214043430|gb|EEB84068.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101]
          Length = 479

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 189/423 (44%), Gaps = 20/423 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           ++    G ++ +      V        + + +  + +    + +V   +  + V    + 
Sbjct: 5   DMAQAVGKVTQVIGAVVDVQFEDHLPEILNAITTENQGKKLILEVAQHLGENTVRTIAMD 64

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    I       GR++N +G+ ID    +   +    I +  P  
Sbjct: 65  ATEGLVRGQRVEDTGAPISIPVGNATLGRIMNVVGEAIDEKGEIASAE-RRSIHADAPEF 123

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 124 AEQSTSSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVF 183

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   + +  N          +  +V    +E P  R    LT +T+AE 
Sbjct: 184 AGVGERTREGNDLYHEMIESNVINPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQ 243

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +
Sbjct: 244 FRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTK 301

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D 
Sbjct: 302 AGSITSVQAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDP 361

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +   +   +  ++ R++  +DI  I G     +     AV +   I  FL Q P 
Sbjct: 362 SIVGEEHYNVARDVQGVLQRYKSLQDIIAILGMDELSEDD-KLAVARARKIERFLSQ-PF 419

Query: 423 DLS 425
           D++
Sbjct: 420 DVA 422


>gi|156530177|gb|ABU75185.1| AtpB [Samadera sp. B-Fernando 1538]
          Length = 491

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I         +  + V    
Sbjct: 14  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMICEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDNKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|32815665|gb|AAP88229.1| ATP synthase beta subunit [Lithocarpus henryi]
          Length = 456

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|5758886|gb|AAD50860.1| ATP synthase beta subunit [Heliconia irrasa]
          Length = 496

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|24638766|ref|NP_726631.1| ATP synthase-beta, isoform A [Drosophila melanogaster]
 gi|194913430|ref|XP_001982694.1| GG16404 [Drosophila erecta]
 gi|47606749|sp|Q05825|ATPB_DROME RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|7304361|gb|AAF59391.1| ATP synthase-beta, isoform A [Drosophila melanogaster]
 gi|21392084|gb|AAM48396.1| RE10864p [Drosophila melanogaster]
 gi|190647910|gb|EDV45213.1| GG16404 [Drosophila erecta]
 gi|220947936|gb|ACL86511.1| ATPsyn-beta-PA [synthetic construct]
 gi|220957230|gb|ACL91158.1| ATPsyn-beta-PA [synthetic construct]
          Length = 505

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/454 (25%), Positives = 201/454 (44%), Gaps = 25/454 (5%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           +  L  L QL+  ++           G I ++      V        + + +    ++  
Sbjct: 12  KNLLPFLGQLSRSHAAKAAKAAAAANGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPR 71

Query: 58  NLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115
            + +V   +  + V    +   E +  G  V   G   RI   A   GR+IN +G+PID 
Sbjct: 72  LVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDE 131

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              +   D +  I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+
Sbjct: 132 RGPID-TDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKT 190

Query: 176 TLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSD 225
            L+     +         + + VGER RE  +   + +        D   K  +V    +
Sbjct: 191 VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMN 250

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 251 EPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 310

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE
Sbjct: 311 TLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAE 368

Query: 345 EGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G     +   
Sbjct: 369 LGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED- 427

Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              V +   I  FL Q        +VF     KL
Sbjct: 428 KLTVARARKIQRFLSQP---FQVAEVFTGHAGKL 458


>gi|224830566|gb|ACN66378.1| ATP synthase beta chain [Pericampylus glaucus]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRPAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|154001280|gb|ABS57115.1| ATP synthase beta subunit [Agathis robusta]
          Length = 424

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  VF  G    +       GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMKVFDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPV-AARAKS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRAAPDFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + S VGER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGCLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|156622717|dbj|BAF76339.1| ATP synthase beta subunit [Nelumbo nucifera]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|111283714|gb|ABH09207.1| ATPase beta subunit [Lepidolaena taylorii]
          Length = 449

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/394 (27%), Positives = 175/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           +V QG+NS   GQ I +  ++        +    +   + +  G  V   G    +    
Sbjct: 2   LVVQGQNSA--GQEINVTCEVQQLLGNNKIRAVAMSATDGLMRGMKVIDTGAPLSVPVGE 59

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +  G  +  I    P           F+TGI+V+D+  P  
Sbjct: 60  ATLGRIFNVLGEPVDELGPVEAG-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 118

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 119 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 178

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K   V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 179 EQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 238

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 239 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 296

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 297 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 356

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|14717942|gb|AAK72713.1| ATP synthase beta subunit [Aristea glauca]
          Length = 483

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIXAPVLDVVFPPGKMPKIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|57868924|gb|AAW57458.1| ATP synthase beta subunit [Aucuba japonica]
          Length = 494

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIAGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|305671629|gb|ADM63124.1| ATP synthase beta subunit [Morina longifolia]
          Length = 437

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 1   GRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRI 60

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 61  FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIG 119

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +  ++              
Sbjct: 120 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIAE 179

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++   
Sbjct: 180 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVSALL 239

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD
Sbjct: 240 GRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLD 297

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 298 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGNNHYETAQRVKQTLQRYKELQDIIAI 357

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 358 LGLDELSEED-RLTVARARKIERFLSQP 384


>gi|302542482|ref|ZP_07294824.1| ATP synthase F1, alpha subunit [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460100|gb|EFL23193.1| ATP synthase F1, alpha subunit [Streptomyces himastatinicus ATCC
           53653]
          Length = 523

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 93/447 (20%), Positives = 172/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQAYKPDAASREEVGTVSVAGDGIARVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAVVLGEFSGIEEGQQVHRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M+R+ V +  +TG + +D  TP+  GQR  V      GK+ L     
Sbjct: 128 EGRRALELQAPTVMDRKSVHEPMETGYKAVDAMTPIGRGQRQLVIGDRQTGKTALCVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + I   VG++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDPKKQVRCIYVAVGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G+  +T +  V    ++ +  I  +V SI DG   L   L    + P
Sbjct: 308 RLLERCAKLSDEMGSGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + ++ E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHRAMRQVSGRLRVDLAQYRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSPS-DLSSEDVFQEITK 435
              + + LKQ      S+ED    I  
Sbjct: 425 GARMVELLKQGQYAPYSTEDEIVSIWA 451


>gi|221078687|gb|ACL99418.1| ATP synthase beta subunit [Diospyros apiculata]
          Length = 462

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRTV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|186886245|gb|ACC93525.1| ATPase F1 alpha subunit [Juncus maritimus]
          Length = 350

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 89/348 (25%), Positives = 152/348 (43%), Gaps = 15/348 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  ++   + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 3   GIAVKAENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGKGA 62

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 63  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 121

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 122 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 181

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 182 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 241

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 242 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 301

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 302 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 349


>gi|34539267|gb|AAQ74517.1| F1-ATPase alpha subunit [Costus lateriflorus]
          Length = 374

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 89/382 (23%), Positives = 157/382 (41%), Gaps = 21/382 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVRE 204
              P+  GQR  +      GK+ +      +               +   +G++   V +
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER      +   G+ TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S    + 
Sbjct: 296 AYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELA 355

Query: 382 RFEETRDIRLIGGYRPGVDLIL 403
           ++ E   +     +   +D   
Sbjct: 356 QYRE---VAAFAQFGSDLDAAT 374


>gi|7708522|emb|CAB89944.1| ATP synthase beta subunit [Nyssa sylvatica]
          Length = 463

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        +    +   + ++ G  V   G    +       GR
Sbjct: 16  KGRDTAGQPINVACEVQQLLGNNRIRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 75

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 76  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 134

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 135 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 194

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 195 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 255 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 312

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 313 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 372

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 373 ILGLDELSEED-RLTVARARKIERFLSQP 400


>gi|6687662|emb|CAB65035.1| ATP synthase beta subunit [Helianthus annuus]
          Length = 498

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/394 (27%), Positives = 176/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           VV  G+N+   GQ I +  ++        V    +   + ++ G  V   G    +    
Sbjct: 47  VVIXGRNTA--GQPINVTXEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGG 104

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+PID    +     +  I    P  +        F+TGI+V+D+  P  
Sbjct: 105 ATLGRIFNVLGEPIDNLGPVDNS-TTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 223

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 224 EQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGS 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 284 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPVT 341

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +       D   +    +   + R++E 
Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKEL 401

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 402 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758904|gb|AAD50878.1| ATP synthase beta subunit [Pandanus utilis]
          Length = 496

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|118573538|sp|Q2PQH4|ATPB_FUCVE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|83596390|gb|ABC25543.1| ATP synthase CF1 beta subunit [Fucus vesiculosus]
 gi|269991277|emb|CAX12455.1| ATP synthase CF1 beta chain [Fucus vesiculosus]
          Length = 476

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 184/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           GYI+ +   V   V        + + +  +GK+   + +V ++  D  V    +   + +
Sbjct: 10  GYITQVIGPVIDAVFSSGVLPKIYNALEVEGKDGPIICEVQQLLGDNRVRAISMSATDGL 69

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V+       +       GR+ N LG+PID        + ++ I    P   + + 
Sbjct: 70  QRGVKVYDTKAPISVPVGKTTLGRIFNVLGQPIDNLGD-TPSNETLPIHRSAPAFTDLET 128

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 129 RPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 188

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 189 RTREGNDLYMEMKESGVINEKNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDIN 248

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT
Sbjct: 249 KQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTNQGSIT 306

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       D
Sbjct: 307 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGD 366

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              K    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 EHYKTAQLVKETLQRYKELQDIIAILGIDELSEED-RLVVDRARKIERFLSQP 418


>gi|306774115|ref|NP_001182423.1| ATP synthase subunit beta, mitochondrial [Macaca mulatta]
          Length = 529

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|228968432|ref|ZP_04129422.1| ATP synthase subunit beta [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791248|gb|EEM38860.1| ATP synthase subunit beta [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 459

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  L 
Sbjct: 39  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGELP 98

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 99  ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 158

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 159 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 218

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 219 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 278

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 279 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 336

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 337 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 395

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 396 FFLSQN 401


>gi|155573945|dbj|BAF75568.1| ATP synthase beta subunit [Chamaesyce atoto]
          Length = 489

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVLDTEAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|114509196|gb|ABI75166.1| ATPase alpha subunit [Egeria najas]
          Length = 361

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V     +S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEF---SSGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAKENEKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|7708616|emb|CAB89980.1| ATP synthase beta subunit [Rheum pinchonii]
          Length = 484

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G ++ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 12  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTSGHPINVTCEVQQLLGNNRVRTVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 309 QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEAHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|52082893|gb|AAU26027.1| ATPase beta subunit [Aristolochia grandiflora]
          Length = 477

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQVNVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|6017814|gb|AAF01641.1| ATP synthase beta subunit [Nelumbo lutea]
 gi|33327755|gb|AAQ09241.1| ATP synthase beta subunit [Nelumbo lutea]
 gi|194267387|gb|ACF35679.1| ATP synthase beta subunit [Nelumbo lutea]
          Length = 491

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTS-PIHKSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|323715440|gb|ADY04788.1| ATP synthase beta subunit [Nyssa sinensis]
          Length = 483

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D  GQ I +  ++        +   
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPYIYNALVV---KGRDTAGQPINVTCEVQQLLGNNRIRAV 66

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 67  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 126 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 185

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 186 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 245

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 246 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 304 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 364 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 422

Query: 420 S 420
            
Sbjct: 423 P 423


>gi|183206622|gb|ACC54509.1| ATP synthase beta subunit [Campanula robinsiae]
          Length = 476

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGQDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVDTSTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S D  +   ++   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDDHYETAQNVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|139522625|gb|ABO77713.1| ATP synthase beta subunit [Burmeistera sp. Muchhala 142]
          Length = 498

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  G+ I +  ++        V    
Sbjct: 21  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDPRGEPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMRESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|110915646|gb|ABH02611.1| ATP synthase beta subunit [Gaudinia hispanica]
          Length = 490

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  SAGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQMNVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|221135161|ref|ZP_03561464.1| F0F1 ATP synthase subunit beta [Glaciecola sp. HTCC2999]
          Length = 460

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 186/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I      +      V        V  G  +    +V + +   +V    +G 
Sbjct: 1   MSQGKVVQIIGAVVDIEFPQDAVPRVYDALKVTDGDLAGLTLEVQQQLGGGVVRSIALGT 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V +     ++       GR+++ LG PID    +G+ +  M I  + P   
Sbjct: 61  TDGLRRGLAVDNTNAPIQVPVGTKTLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 EQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 TAQGVQTTLQRYKELKDIIAILGMDELSEED-KQVVTRARKIQRFLSQP 405


>gi|63091975|emb|CAH58845.1| ATP synthase alpha chain [Enterococcus faecium]
          Length = 367

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 154/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGEIV-TDKARPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLDSDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|12004115|gb|AAG43897.1|AF213766_1 ATP synthase beta subunit [Douglasia nivalis]
          Length = 487

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G   R+       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLPRGMEVIDTGTALRVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFXQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|83313238|ref|YP_423502.1| F0F1 ATP synthase subunit beta [Magnetospirillum magneticum AMB-1]
 gi|118573694|sp|Q2VZN2|ATPB_MAGSA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|82948079|dbj|BAE52943.1| F0F1-type ATP synthase, beta subunit [Magnetospirillum magneticum
           AMB-1]
          Length = 474

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 110/428 (25%), Positives = 190/428 (44%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    Q   +   +  + +    + +V   +    V    +   + ++
Sbjct: 7   GTITQVLGAVVDVRFDGQLPAILSALHLEHQGKKLVLEVAQHLGESTVRTIAMDSTDGLT 66

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR+IN +G+PID    +G    ++ I +  P  +++   
Sbjct: 67  RGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIG-NKTTLPIHADAPEFVDQSTE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P C G +IG+  G+G+GK+ L+     +         + + VGER
Sbjct: 126 TEILVTGIKVIDLLAPYCKGGKIGLCGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 185

Query: 199 GREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +   +        K  +V    +E P  R    L+ +T+AEYF      
Sbjct: 186 TREGNDLYHEMIESGVIKLDGPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDVEGQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VLNR +AE G YP VDPL S SR+ D      D 
Sbjct: 304 QAIYVPADDLTDPAPATSFAHLDATTVLNRQIAELGIYPAVDPLDSTSRVLDPRVVGNDH 363

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            +    +  ++  ++  +DI  I G     +      V +   I  FL Q        ++
Sbjct: 364 YQTARDVQRILQTYKSLQDIIAILGMDELSEED-KLVVSRARKIQRFLSQP---FHVAEI 419

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 420 FTGSPGKL 427


>gi|260174642|ref|ZP_05761054.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. D2]
 gi|315922906|ref|ZP_07919146.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. D2]
 gi|313696781|gb|EFS33616.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. D2]
          Length = 527

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 170/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINANVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIRVGEGMLGRVIDPLGEPLDGKGLIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 128 YDMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRSNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGALDYTIVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIISQEEVAREMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGTRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITALTIDKGRKNGQLLIQPQ 450


>gi|224830512|gb|ACN66351.1| ATP synthase beta chain [Cissampelos pareira]
          Length = 487

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D LGQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718140|gb|AAK72809.1| ATP synthase beta subunit [Moringa oleifera]
          Length = 479

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|7708262|emb|CAB90053.1| ATP synthase beta subunit [Cyrilla racemiflora]
          Length = 464

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 107/388 (27%), Positives = 173/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 24  GRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPXSVPVGGATLGRI 83

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 84  FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 142

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +  ++              
Sbjct: 143 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEENIAE 202

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++   
Sbjct: 203 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALL 262

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD
Sbjct: 263 GRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLD 320

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 321 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQRYKELQDIIAI 380

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 381 LGLDELSEED-RLTVARARKIERFLSQP 407


>gi|62085107|gb|AAX62960.1| ATP synthase beta subunit [Cespedesia spathulata]
          Length = 483

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVTFSPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|238751778|ref|ZP_04613266.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
 gi|238710049|gb|EEQ02279.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380]
          Length = 454

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 159/447 (35%), Positives = 244/447 (54%), Gaps = 17/447 (3%)

Query: 5   LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L +L +  E  +++ +++  G ++  T +    T L   + +G   + +    G+  +  
Sbjct: 9   LTSLDKFEERITQSTIIRRYGRLTRATGLVLEATGL--QLPIGATCLIERHDNGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFH-------WGRFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+            ++       GRV++   KP
Sbjct: 67  SEVVGFNGQHLFLMPLEEVEGIVPGARVYARVTSGGASASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +  +      +++     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPA-PETSYCAPLITPPINPLQRTAIEQVLDVGVRTINSLLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  F+  RD+  +G Y  G D +LDKA+   P
Sbjct: 366 DIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDPLLDKAIALYP 425

Query: 412 IIYDFLKQSPSDLSS-EDVFQEITKKL 437
            +  FL+Q   + SS ED  Q +T   
Sbjct: 426 QMEIFLQQGMFERSSYEDACQHLTSLF 452


>gi|124361638|gb|ABN09261.1| ATP synthase beta subunit [Diospyros consolatae]
          Length = 455

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|114777383|ref|ZP_01452380.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1]
 gi|114552165|gb|EAU54667.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1]
          Length = 462

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 106/362 (29%), Positives = 173/362 (47%), Gaps = 9/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  + V    +G  + +  G  V   G    +       GR++N LG  ID      + +
Sbjct: 44  IGNNTVRAVAMGSTDGLKRGMAVEDTGNAIMVPVGQGTLGRIMNVLGTGIDFQGEAVECE 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  + P         +  +TGI+VID+  P+  G ++G+F G+G+GK+  +     
Sbjct: 104 ERWAIHREPPRFEELAPASEILETGIKVIDLMAPIAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKAHGGFSVFAGVGERTREGNDFYYEMKESNVLDKVALVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AEYF  +G +VL+ +D+I R++ +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 224 TMAEYFRDEGRDVLIFIDNIYRYSLAGVEVSALLGRMPSAVGYQPTLAEEMGKLQERIAS 283

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           ++   G+IT+V +V V  D+  DP   +  + LD  IVL+R +AE G YP VDPL S SR
Sbjct: 284 TKT--GSITSVQAVYVPADDLTDPAPATTFAHLDSTIVLSRQIAELGIYPAVDPLDSTSR 341

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     ++   +  ++   + R++E +DI  I G     D      V +   I  FL 
Sbjct: 342 QLDPKVVGSEHYDIAINVQQTLQRYKELQDIIAILGMDELSDDD-KLLVTRARKIQRFLS 400

Query: 419 QS 420
           Q 
Sbjct: 401 QP 402


>gi|56236582|gb|AAV84658.1| ATP synthase beta subunit [Araucaria bidwillii]
          Length = 424

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  VF  G    +   A   GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMKVFDTGAPLSVPVGAATLGRIFNVLGEPVDDLGPVN-ARAKS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + S VGER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGCLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|292493904|ref|YP_003529343.1| ATP synthase F1 subunit beta [Nitrosococcus halophilus Nc4]
 gi|291582499|gb|ADE16956.1| ATP synthase F1, beta subunit [Nitrosococcus halophilus Nc4]
          Length = 458

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/362 (29%), Positives = 177/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +S G  V + G    +   A   GR+++ LG P+D    +G+ +
Sbjct: 45  LGDGVVRTIAMGSSDGLSRGMAVTNTGSPISVPVGAKTLGRIMDVLGDPVDEAGPVGEEE 104

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P         +  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R
Sbjct: 105 -RWAIHRKAPTYEELSPATELLETGIKVVDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +     +  K  +V    +E P  R    LT +
Sbjct: 164 NIATEHAGYSVFAGVGERTREGNDFYHEMKESQVLDKVSLVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AEYF  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 224 TMAEYFREEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 281

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR
Sbjct: 282 TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSR 341

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++  S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 342 QLDPLIVGQEHYQVARSVQGNLQRYKELKDIIAILGMDELSEED-KLIVARARKIQRFLS 400

Query: 419 QS 420
           Q 
Sbjct: 401 QP 402


>gi|221078701|gb|ACL99425.1| ATP synthase beta subunit [Diospyros dictyonema]
          Length = 463

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSSIHRPA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|170178361|gb|ACB10600.1| ATP synthase beta subunit [Cornus suecica]
          Length = 455

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DVTTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEDD-RLTVARARKIERFLSQP 395


>gi|56675512|emb|CAB44028.2| H(+)-transporting ATP synthase [Fremontodendron californicum x
           Fremontodendron mexicanum]
          Length = 485

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+I ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSIISIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|21684883|emb|CAD11568.1| ATP synthase beta subunit [Ecdeiocolea monostachya]
          Length = 484

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 174/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GK  +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 50  GKQINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLG 109

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 110 EPVDSLGPVDTS-ATFPIHRSAPAFIELDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGA 168

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +  ++               K  +
Sbjct: 169 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEKNLAESKVAL 228

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P 
Sbjct: 229 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPS 288

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 289 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 346

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +   S+   + R++E +DI  I G   
Sbjct: 347 SRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQSVKQTLQRYKELQDIIAILGLDE 406

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 407 LSEED-RLTVARARKIERFLSQP 428


>gi|14718072|gb|AAK72777.1| ATP synthase beta subunit [Heteropyxis natalensis]
          Length = 445

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 5   KGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 65  IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 124 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 183

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 184 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 244 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 302 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 361

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 362 ILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|7708290|emb|CAB90073.1| ATP synthase beta subunit [Euphorbia polychroma]
          Length = 486

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVMDTKAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRATSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|18860318|ref|NP_569636.1| ATP synthase CF1 beta subunit [Psilotum nudum]
 gi|20141186|sp|O03081|ATPB_PSINU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|18389471|dbj|BAB84223.1| ATP synthase beta subunit [Psilotum nudum]
          Length = 492

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 185/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S  +    GYI+ I            +   + + ++ +G+N    GQ I +  ++     
Sbjct: 11  STLVERNIGYITQIIGPVLDAAFPPGKMPNIYNSLIVKGQNPA--GQQINVTCEVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + ++ G  V   G    +       GR+ N LG+P+D    +   D  
Sbjct: 69  NNKVRAIAMSATDGLTRGMEVIDTGAPLSVPVGQATLGRIFNVLGEPVDNLGPIN-ADKK 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 128 SSIHEPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYTEMKESKVINEQNLSESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTIAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|312145152|gb|ADQ28319.1| ATPase subunit 1 [Arisaema amurense]
          Length = 350

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGK-----STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KK 216
            +      GK      T+L+    +   +    +   +G++   V + ++     N  + 
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQINSSSETLYCVYVAIGQKRSTVAQLVQILSEANALEY 177

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      
Sbjct: 178 SILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRP 237

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V SI DG
Sbjct: 238 PGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDG 297

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            I L   L   G  P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 298 QICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYREV 349


>gi|260771027|ref|ZP_05879955.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|260613916|gb|EEX39107.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|315178661|gb|ADT85575.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
          Length = 467

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/415 (26%), Positives = 182/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V + K    L    ++   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSAVPGVYDALTVAEAKERLVLEVQQQLGGGVVRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  +L   I  + P    
Sbjct: 61  DGLRRGMSVENTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEL-YSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYHEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARGVQQTLQRYKELKDIIAILGMDELSESD-KQVVARARKIERFLTQP 411


>gi|226952190|ref|ZP_03822654.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244]
 gi|294648871|ref|ZP_06726327.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837028|gb|EEH69411.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244]
 gi|292825262|gb|EFF84009.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC
           19194]
          Length = 464

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 189/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLNVTSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEE-RLPIHREAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  S+ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARSVQNVLQRYKELKDIIAILGMDELSEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|124361618|gb|ABN09251.1| ATP synthase beta subunit [Diospyros bipindensis]
 gi|124361640|gb|ABN09262.1| ATP synthase beta subunit [Diospyros cooperi]
 gi|124361660|gb|ABN09272.1| ATP synthase beta subunit [Diospyros ferrea]
 gi|124361676|gb|ABN09280.1| ATP synthase beta subunit [Diospyros gracilipes]
 gi|124361694|gb|ABN09289.1| ATP synthase beta subunit [Diospyros malabarica f. atrata]
 gi|124361696|gb|ABN09290.1| ATP synthase beta subunit [Diospyros malabarica f. malabarica]
 gi|124361702|gb|ABN09293.1| ATP synthase beta subunit [Diospyros melocarpa]
 gi|124361706|gb|ABN09295.1| ATP synthase beta subunit [Diospyros mindanaensis]
 gi|124361712|gb|ABN09298.1| ATP synthase beta subunit [Diospyros natalensis]
 gi|124361758|gb|ABN09321.1| ATP synthase beta subunit [Diospyros sp. FS1637]
 gi|124361760|gb|ABN09322.1| ATP synthase beta subunit [Diospyros sp. FS2217]
 gi|124361766|gb|ABN09325.1| ATP synthase beta subunit [Diospyros sp. K20616]
 gi|124361768|gb|ABN09326.1| ATP synthase beta subunit [Diospyros sp. RNF 970]
 gi|124361770|gb|ABN09327.1| ATP synthase beta subunit [Diospyros sp. W36]
 gi|124361788|gb|ABN09336.1| ATP synthase beta subunit [Maba myriophylla]
 gi|221078691|gb|ACL99420.1| ATP synthase beta subunit [Diospyros borbonica]
 gi|221078707|gb|ACL99428.1| ATP synthase beta subunit [Diospyros ferrea]
 gi|221078709|gb|ACL99429.1| ATP synthase beta subunit [Diospyros ferrea]
          Length = 465

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|63091789|emb|CAH58745.1| ATP synthase alpha chain [Enterococcus avium]
 gi|63091805|emb|CAH58753.1| ATP synthase alpha chain [Enterococcus avium]
 gi|63091823|emb|CAH58762.1| ATP synthase alpha chain [Enterococcus avium]
 gi|63091931|emb|CAH58823.1| ATP synthase alpha chain [Enterococcus avium]
          Length = 367

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 93/375 (24%), Positives = 154/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIVLGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+P+DG   +   + +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGENMIGRVVNPLGQPVDGMGPIETTN-TRPVEAMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKESTVRSQVETLRK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +  ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGAMDYTIVVTAGASQPAPLLFIAPYAGTAMGEEFMYNGKHVLVVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYAGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|34539463|gb|AAQ74615.1| F1-ATPase alpha subunit [Tofieldia calyculata]
          Length = 399

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 157/377 (41%), Gaps = 19/377 (5%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV +ALG PIDG  +
Sbjct: 11  GXALNLENENVGIVVFGSDTXIKEGDLVKRTGSIVDVPAGKAMLGRVXDALGVPIDGRGA 70

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 71  LSDHE-RRRVEVKAPGIIERKSVHEXMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 129

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 130 IDTILNQKQLNSRGTSESETLYCVYVAIGQKRSTVXQLVQILSEANALEYSILVAATASD 189

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 190 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 249

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 250 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLXTELFY 309

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D +  
Sbjct: 310 RGIRPAINVGLSVSRVGSAAQLXAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAVTQ 366

Query: 405 KAVHQVPIIYDFLKQSP 421
              ++   + +  KQ  
Sbjct: 367 ALPNRGARLTEVPKQPQ 383


>gi|320201520|gb|EFW76099.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           EC4100B]
          Length = 438

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 156/409 (38%), Positives = 229/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I++I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 25  RYEGKITNIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 80

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P++ + +         + ++ P  + RQ
Sbjct: 81  MYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPMESNIAAPYLPFERSLYAEPPDPLLRQ 140

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 141 VIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 200

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 201 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSV 260

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 261 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 318

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 319 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 378

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  +     +  IG Y  G D   DKA+    +I  F++QS  D+SS +
Sbjct: 379 IATYNNVELLIRIGEYTMGQDPEADKAIKNRKLIQSFIQQSTKDISSYE 427


>gi|150035735|gb|ABR67213.1| ATP synthase beta subunit [Joinvillea plicata]
          Length = 427

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 166/367 (45%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATF 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +  ++               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYKEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVXRARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|110915644|gb|ABH02610.1| ATP synthase beta subunit [Gaudinia fragilis]
          Length = 490

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  SAGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910764|gb|ABI48114.1| ATPase beta subunit [Dumortiera hirsuta]
          Length = 469

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 31  GQEINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGAPLSVPVGEATLGRIFNVLG 90

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 91  EPVDNLGPV-EVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 149

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 150 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 210 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 270 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 328 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 387

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 388 LSEED-RLTVARARKIERFLSQP 409


>gi|63091813|emb|CAH58757.1| ATP synthase alpha chain [Enterococcus gilvus]
 gi|63091831|emb|CAH58766.1| ATP synthase alpha chain [Enterococcus gilvus]
          Length = 367

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIVLGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDNMIGRVVNPLGQPIDGMGPI-ETSKTRPVEAMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKESTVRSQVETLRK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGAMDYTIVVTAGASQPAPLLFIAPYAGTAMGEEFMYNGKHVLVVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYAGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|7708536|emb|CAB89951.1| ATP synthase beta subunit [Passiflora coccinea]
          Length = 470

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/383 (27%), Positives = 173/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+ S+   +V ++  +  V    +   E ++ G  V   G    +       GR+ N LG
Sbjct: 36  GQPSNVACEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLNVPVGGATLGRIFNVLG 95

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 96  EPIDELGPVD-TRTTSSIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 154

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 155 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVAL 214

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+++AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 215 VYGQMNEPPGARMRVGLTALSMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 274

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 275 AVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 332

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  K   S+   + R++E +DI  I G   
Sbjct: 333 SRGLAAKGIYPAVDPLDSTSTMLQPQIVGSEHYKTAQSVKQTLQRYKELQDIIAILGLDE 392

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 393 LSEED-RLTVARARKIERFLSQP 414


>gi|15425566|emb|CAC60322.1| ATP synthase beta subunit [Cuttsia viburnea]
          Length = 489

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V   +  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPAADLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGDEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|302834718|ref|XP_002948921.1| hypothetical protein VOLCADRAFT_80433 [Volvox carteri f.
           nagariensis]
 gi|300265666|gb|EFJ49856.1| hypothetical protein VOLCADRAFT_80433 [Volvox carteri f.
           nagariensis]
          Length = 580

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/413 (25%), Positives = 185/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           G++S +      V    +   +   +  QG +   + +V +   D  V    +   + + 
Sbjct: 44  GFVSQVIGPVVDVRFDGELPSILSSLEVQGHSVRLVMEVAQHMGDNTVRCIAMDSTDGLV 103

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G   ++       GR++N +G+P+D    +   ++   I    P    +   
Sbjct: 104 RGQKVLNTGAPIKVPVGRGTLGRIMNVIGEPVDEQGPIDAAEV-WSIHRDAPEFTEQSTE 162

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 163 QEILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 222

Query: 199 GREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
            RE  +   + +              K  +V    +E P  R    LT +T+AEYF    
Sbjct: 223 TREGNDLYREMIESGVIKLGDKRGESKCTLVYGQMNEPPGARARVALTGLTVAEYFRDVE 282

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT
Sbjct: 283 GQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSIT 340

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ +      
Sbjct: 341 SVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLNPNIIGA 400

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 401 EHYNVARGVQKVLQDYKNLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 452


>gi|260677426|ref|YP_003208194.1| ATP synthase CF1 beta subunit [Coix lacryma-jobi]
 gi|209361364|gb|ACI43279.1| ATP synthase CF1 beta subunit [Coix lacryma-jobi]
          Length = 498

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      +T    +   + + ++ + +++     +   +V ++  +  V    
Sbjct: 19  SVGRIDQIIGPVLDITFPPGKLPYIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E   L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTERGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|229064956|ref|ZP_04200254.1| ATP synthase subunit beta [Bacillus cereus AH603]
 gi|228716257|gb|EEL67969.1| ATP synthase subunit beta [Bacillus cereus AH603]
          Length = 469

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGDVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR        +E   +   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYGVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|254515887|ref|ZP_05127947.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3]
 gi|219675609|gb|EED31975.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3]
          Length = 465

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 184/414 (44%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G +  I      V      V  + D +    K+     Q  ++   +V    +G  E
Sbjct: 1   MSSGRVVQIIGAVIDVEFPRDAVPRVYDALKITEKDITLEVQ-QQLGDGVVRTIAMGSSE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S G  V + G    +       GR+++ LG PID    +G+ +    I    P     
Sbjct: 60  GLSRGLSVDNTGAPIAVPVGNETLGRIMDVLGNPIDERGPIGEQE-RASIHRAAPTYEEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              +   +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SASDDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYYEMQESKVVDLENPANSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 239 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D     
Sbjct: 297 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLIG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +       + +++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 NEHYDTARGVQNVLQRYKELKDIIAILGMDELSEED-KQTVDRARKIERFLSQP 409


>gi|150035725|gb|ABR67208.1| ATP synthase beta subunit [Brachyelytrum aristosum]
          Length = 457

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 179/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I  I      VT     +       VV   K+ D  G  I +  ++        V 
Sbjct: 2   STGRIDQIIGPVLDVTFPPGKLPYIYNALVV---KSRDTAGSQINVTCEVQQLLGNNRVR 58

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 59  AVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHR 117

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 118 SAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 177

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 178 GVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTAL 237

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 238 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 297 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTS 355

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 356 TMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 414

Query: 418 KQS 420
            Q 
Sbjct: 415 SQP 417


>gi|113910752|gb|ABI48108.1| ATPase beta subunit [Sphaerocarpos donnellii]
          Length = 457

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 108/394 (27%), Positives = 176/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           ++ +G+NS   GQ I +  ++        V    +   + +  G LV   G    +    
Sbjct: 10  LIVKGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMLVIDTGAPLTVPVGE 67

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +    +   I    P           F+TGI+V+D+  P  
Sbjct: 68  ATLGRIFNVLGEPVDNLGPVDVSTI-FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 126

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 127 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 186

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 187 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 246

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 247 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 304

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 305 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 364

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 397


>gi|63091795|emb|CAH58748.1| ATP synthase alpha chain [Enterococcus malodoratus]
 gi|63091803|emb|CAH58752.1| ATP synthase alpha chain [Enterococcus raffinosus]
 gi|63091817|emb|CAH58759.1| ATP synthase alpha chain [Enterococcus malodoratus]
 gi|63091907|emb|CAH58808.1| ATP synthase alpha chain [Enterococcus raffinosus]
 gi|63091925|emb|CAH58818.1| ATP synthase alpha chain [Enterococcus malodoratus]
 gi|72534379|emb|CAH58820.1| ATP synthase alpha chain [Enterococcus sp. LMG 13603]
 gi|72534381|emb|CAH58822.1| ATP synthase alpha chain [Enterococcus sp. LMG 14595]
          Length = 367

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 154/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIVLGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDNMIGRVVNPLGQPIDGMGPI-ETSKTRPVEAMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKESTVRSQVETLRK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +  ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGAMDYTIVVTAGASQPAPLLFIAPYAGTAMGEEFMYNGKHVLVVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYAGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|33327761|gb|AAQ09244.1| ATP synthase beta subunit [Piper betle]
 gi|56675690|emb|CAB89720.2| ATP synthase beta subunit [Piper betle]
          Length = 498

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D  G+ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALIVKGP--DTAGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21684927|emb|CAD11590.1| ATP synthase beta subunit [Streptochaeta spicata]
          Length = 451

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVT-CLSQYVCLGDFVVHQ-----GKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V +     GK  +   +V ++  +  V    
Sbjct: 13  SAGRIDQIIGPVLDVTFSPGKLPYIYNALVVKSRDTAGKQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGDEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|62902843|gb|AAY19336.1| ATP synthase beta subunit [Stackhousia monogyna]
          Length = 488

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFYPGKMPNIYNALVVKGRDTSGQTINVICEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IELETKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|291320299|ref|YP_003515561.1| ATP synthase subunit beta [Mycoplasma agalactiae]
 gi|290752632|emb|CBH40605.1| ATP synthase beta chain [Mycoplasma agalactiae]
          Length = 487

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 118/420 (28%), Positives = 192/420 (45%), Gaps = 14/420 (3%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINL 67
              ++   N +   G +  I      V      +   L   +++   N+  L     +  
Sbjct: 4   DKIKNSENNNIGNKGKVVQIVGPVVDVRFPKGQLPSLLNALIINYDDNTYTLEVAQHVGD 63

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V    +     +  G  V+  G    +       GR+ + LG PID  D+       M
Sbjct: 64  DTVRAISMVSTSGLPRGIDVYDTGAPISVPVGNKVLGRMFDVLGNPIDLKDAPDAEK--M 121

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I +  P    +    + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 122 PIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKGGKIGLFGGAGVGKTVLVQELINNIA 181

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            +     + + VGER RE  +   + L   + +K+ +V    +E P  R    LT +T+A
Sbjct: 182 REHGGLSVFAGVGERTREGNDLYNEMLASGVLEKTALVFGQMNEPPGARMRVALTGLTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI    
Sbjct: 242 EYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIA--S 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V +V V  D+  DP   +  + LD   VL+R++A  G YP VDPL S SRL 
Sbjct: 300 TNKGSITSVQAVYVPADDLTDPAPATTFNHLDAKTVLDRNIAALGIYPAVDPLESSSRLL 359

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      +  +    +  ++ RF+E +DI  I G     +    K V +   I +FL Q 
Sbjct: 360 DPLVIGQEHYETARRVVSILQRFKELQDIIAILGIGELSEED-KKVVARARRIRNFLSQP 418


>gi|224438542|ref|ZP_03659462.1| F0F1 ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818]
 gi|313144968|ref|ZP_07807161.1| ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818]
 gi|313129999|gb|EFR47616.1| ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818]
          Length = 466

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 194/409 (47%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I+ +      V   S    + + +      +G+ +  + +V     D  V    + + 
Sbjct: 3   GKITQVMGPVVDVEFESYLPMINEAIDVIFDVEGRENRLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G+   +       GR+ N  G  IDG   L   DL   I  + P   N
Sbjct: 63  EGLTRGQEVKARGKMIEVPVGEAVLGRIFNVTGDVIDG-GELLATDLKWAIHREAPSFEN 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTRTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV S LD   VLNR ++E+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPASVFSHLDATTVLNRKISEKGIYPAVDPLDSTSRILDPQVVGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    + V +   I  FL Q 
Sbjct: 360 VATGIQQVLQKYKDLQDIIAILGMDELSEED-KQIVDRARKIEKFLSQP 407


>gi|183206694|gb|ACC54545.1| ATP synthase beta subunit [Campanula scouleri]
          Length = 477

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +    G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTXNGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|170077372|ref|YP_001734010.1| F0F1 ATP synthase subunit beta [Synechococcus sp. PCC 7002]
 gi|169885041|gb|ACA98754.1| ATP synthase beta chain [Synechococcus sp. PCC 7002]
          Length = 483

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I          S  +  + + +  QGKN    GQ I +  ++        V    
Sbjct: 10  GKITQIIGPVIDAEFPSGKMPRIYNALKIQGKNP--YGQEINLTCEVQQLLGDNQVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  +   G    +       GR+ N LG+P+D    +G  + S  I    P
Sbjct: 68  MSSTDGLVRGMDILDTGAPISVPVGKKTLGRIFNVLGEPVDEKGEVGAEETS-PIHRPAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                      F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +   +     
Sbjct: 127 KLTELDTAPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATNHGGVS 186

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 187 VFAGVGERTREGNDLYNEMIESGVINPDNLNDSKIALVYGQMNEPPGARMRVGLSGLTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 247 EYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LDG  VL+R+LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPSIVGEDHYNTARAVQSTLQRYKELQDIIAILGLDELSEED-RLTVDRARKIERFLSQP 423


>gi|170087348|ref|XP_001874897.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650097|gb|EDR14338.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 540

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 190/424 (44%), Gaps = 19/424 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLD 68
           +  Y+       G + ++      V   +  +   L    V        + +V   +  +
Sbjct: 59  SRTYATEAKGAVGSVKTVIGAVVDVQFETDNLPPILNALEVQNFSGGRLVLEVASHLGEN 118

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   E +  G  V   G    +       GR++N +G+PID    + KG     
Sbjct: 119 SVRTIAMDGTEGLVRGTKVVDTGSPIMVPVGTATLGRIMNVIGEPIDERGPI-KGVKLCP 177

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  PP +++    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 178 IHADPPPFVDQSTTAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAK 237

Query: 188 DKV---IISLVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTA 238
                 I   VGER RE  +   + +       +   K  +V    +E P  R    LT 
Sbjct: 238 AHGGFSIFCGVGERTREGNDLYHEMIETGVINLEGDSKVALVFGQMNEPPGARARVALTG 297

Query: 239 VTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI
Sbjct: 298 LTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI 357

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S 
Sbjct: 358 --TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSK 415

Query: 358 SRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+ D      +   + +++  ++  ++  +DI  I G     +      V +   I  F
Sbjct: 416 SRMLDPRIVGQEHYDVATAVQKILQDYKSLQDIIAILGMDELSEED-KLTVERARKIQRF 474

Query: 417 LKQS 420
           + Q 
Sbjct: 475 MSQP 478


>gi|161784199|ref|YP_001595515.1| ATPase beta subunit [Lemna minor]
 gi|190358674|sp|A9L9A3|ATPB_LEMMI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|88696777|gb|ABD48502.1| ATPase beta subunit [Lemna minor]
          Length = 498

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 188/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G+++D  GQ I++  ++        V    
Sbjct: 21  GRVAQIIGPVLDVVFPPGKMPNIYNALVVKGQDAD--GQEIKVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPGIVGEDHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|221361483|emb|CAX18653.1| Type III secretion system, ATPase, LEE associated [Escherichia
           coli]
 gi|221361543|emb|CAX18733.1| Type III secretion system, ATPase, LEE associated [Escherichia
           coli]
          Length = 446

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 156/409 (38%), Positives = 230/409 (56%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I +I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKIINIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 88

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P++ + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPMETNIAAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+    +I +F++QS  D+SS +
Sbjct: 387 IATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYE 435


>gi|163733137|ref|ZP_02140581.1| flagellum-specific ATP synthase [Roseobacter litoralis Och 149]
 gi|161393672|gb|EDQ17997.1| flagellum-specific ATP synthase [Roseobacter litoralis Och 149]
          Length = 449

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 161/428 (37%), Positives = 242/428 (56%), Gaps = 3/428 (0%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           A+    N V   G +  + +    +  L+    +GD VV   +     G++++++ D + 
Sbjct: 12  AQITELNPVRSIGRVCRVEAGVIHIAGLAGKARIGDLVVVYRQGDPLSGEILQLDGDTLV 71

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           I P    E ++L D         I+PS  W GR+I+  G PIDG   L +G  +  + S 
Sbjct: 72  ILPDQDAEGVALNDRAALLEARGIAPSEGWIGRIIDPFGNPIDGK-PLLRGAHARSLRSA 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P    R+ +     TG+ V++   P+  GQR+G+FAGSG+GKS+LL   A++   D V+
Sbjct: 131 PPEPALRRSMGARLNTGMSVLNTMLPVVKGQRVGLFAGSGVGKSSLLGHLAQNMTADVVV 190

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++LVGERGRE+R F+E+ LG + LK+SVVV ATSD+SP++R+     A+++AE+F   G 
Sbjct: 191 VALVGERGRELRHFVEEVLGSEGLKRSVVVCATSDQSPLIRRRCAWAAMSVAEHFRDMGL 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL++ DSITRFA + RE+A  SGE PV RGYP S    +  L ER GP E  +G+IT +
Sbjct: 251 SVLILADSITRFAEAHREVAVASGEAPVLRGYPPSTAHLIMSLCERAGPGEGSQGDITGI 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVLV G +  +PIAD +R +LDGHIVLNR +AE GRYP +D L S+SR    A    E 
Sbjct: 311 FSVLVAGSDMEEPIADILRGVLDGHIVLNREIAERGRYPAIDVLKSISRSLPAAADDIEN 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +L+S +   +  +E+   +   G Y  G D  +D A+     +  F    P      + F
Sbjct: 371 ELISIVRRYLSVYEQNEMMIRAGLYSQGSDPEIDAAIQVWSELDAFFA-KPEKQDVTNSF 429

Query: 431 QEITKKLQ 438
            ++   L+
Sbjct: 430 SQLELLLR 437


>gi|21633319|gb|AAM52134.1| ATP synthase beta subunit [Merremia umbellata]
          Length = 490

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V    + +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPRKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIXRFLSQP 432


>gi|9799472|gb|AAF98986.1| ATP synthase beta subunit [Mytilaria laosensis]
          Length = 479

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|7688035|emb|CAB89722.1| ATP synthase beta subunit [Sarcandra grandifolia]
          Length = 498

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|49574636|ref|NP_848067.2| ATP synthase CF1 beta subunit [Adiantum capillus-veneris]
 gi|56757347|sp|O03062|ATPB_ADICA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|48476006|gb|AAB51749.3| ATP synthase CF1 beta chain [Adiantum capillus-veneris]
          Length = 493

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/437 (25%), Positives = 189/437 (43%), Gaps = 29/437 (6%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
            ++ L  + S+ +    GYI+ I      V     +   + + +V +G+NS   GQ I +
Sbjct: 2   KISSLLFEISELVEKNVGYITQIIGPVLDVAFSPGEMPSIYNSLVVKGRNSA--GQEINV 59

Query: 66  NLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD 116
             ++        V    +   + +  G      G    +       GR+ N LG+P+D  
Sbjct: 60  TCEVQQLLGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNL 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ 
Sbjct: 120 GPV-QNSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 178

Query: 177 LLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSD 225
           L+     +       +S+ G   ER RE  +   +               K  +V    +
Sbjct: 179 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMN 238

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LTA+T+AEYF       +L  +D+I RF  +  E++   G +P A GY  
Sbjct: 239 EPPGARMRVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQP 298

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA 
Sbjct: 299 TLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAA 356

Query: 345 EGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           +G YP VDPL S S +        +  +    +   + R++E +DI  I G     +   
Sbjct: 357 KGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED- 415

Query: 404 DKAVHQVPIIYDFLKQS 420
              V +   I  FL Q 
Sbjct: 416 RLTVARARKIERFLSQP 432


>gi|1352033|sp|P29707|ATPB_PROMO RecName: Full=ATP synthase subunit beta, sodium ion specific;
           AltName: Full=Na(+)-translocating ATPase subunit beta
 gi|897798|emb|CAA41374.1| beta subunit [Propionigenium modestum]
          Length = 467

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 190/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G I+ I      VT  ++   + +   + +G     + +V + +   +V    +   + +
Sbjct: 5   GVITQIIGPVVDVTFENELPRIYNALKIDRGNGEYLVAEVQQHLGNSVVRAVAMDATDGL 64

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N LG+P+D    + K +    I  + P   ++  
Sbjct: 65  QRGMEVVDTGPAITVPVGKAVLGRILNVLGEPVDEAGEV-KAEEYAPIHREAPAFEDQGT 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++ F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 EKEVFETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAQGHGGLSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE R+  ++ L   +  K+ +V    +E P  R    LT +T+AE F  K   +VL  
Sbjct: 184 RTREGRDLYDEMLESGVLDKTSLVYGQMNEPPGARLRVGLTGLTMAENFRDKEGQDVLFF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V
Sbjct: 244 VDNIFRFTQAPSEVSALLGRMPSAVGYQPNLATDMGALQERI--TSTKTGSITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A  G YP VDPL S S  L  +    +      
Sbjct: 302 PADDLTDPAPATTFTHLDATTVLSRRIASLGIYPAVDPLDSTSTALEPQIIGHEHYNTAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D      V++   I  F  Q 
Sbjct: 362 EVQQILQRYKELQDIIAILGMDELSDED-KVTVNRARKIERFFSQP 406


>gi|290957354|ref|YP_003488536.1| ATP synthase subunit alpha [Streptomyces scabiei 87.22]
 gi|260646880|emb|CBG69977.1| ATP synthase alpha chain [Streptomyces scabiei 87.22]
          Length = 544

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 90/447 (20%), Positives = 170/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 26  DALENFVQSYQPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 81

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 82  NLEEREIGAIVLGEFSGIEEGQPVSRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 140

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 141 SGRRALELQAPGVMARKSVHEPMETGYKAVDAMTPVGRGQRQLIIGDRQTGKTALAVDTI 200

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + +   +G++G  +             + + +V A + +    +
Sbjct: 201 INQRDNWRSGDVNKQVRCVYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 260

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 261 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 320

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 321 RLLERCAKLSDELGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 380

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D      + +
Sbjct: 381 ALNVGISVSRVGGSAQHKAMKQVSGRLRLDLAQYRELEAFAAFG---SDLDAASKSQLER 437

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ     + +ED    +  
Sbjct: 438 GQRLVELLKQPQYQPMPTEDQVVSVWA 464


>gi|260429606|ref|ZP_05783583.1| flagellum-specific ATP synthase [Citreicella sp. SE45]
 gi|260420229|gb|EEX13482.1| flagellum-specific ATP synthase [Citreicella sp. SE45]
          Length = 454

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 163/414 (39%), Positives = 233/414 (56%), Gaps = 4/414 (0%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
            +  L    E      V   G + S+      V  L+   C+GD +          G+V+
Sbjct: 5   EIAGLRSRIEQIQP--VRAVGRVRSVDGTVIWVRGLAHVACIGDRLRLFRGGDTLDGEVL 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           RI  D+V + P    E +S GD V   G   ++PS  W GRVI+  G+P+D    L  G 
Sbjct: 63  RIRDDLVAMLPDEGAEGVSQGDRVAVLGAPTLAPSDSWIGRVIDPYGQPLDDM-PLNPGP 121

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
                 +  PPA  R+ +     TG+   D   P+  GQR+G+FAGSG+GKS LL+  A+
Sbjct: 122 QRRPFRASPPPAARRRGLGARLPTGLSAFDTLLPIVRGQRVGLFAGSGVGKSRLLASLAQ 181

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D V+++LVGERGREV +F+   LG D + +SVVV ATSD SP+ R+  PL A+TIA
Sbjct: 182 GMAADVVVLALVGERGREVHDFVHTVLGEDGMARSVVVAATSDRSPLERRRCPLAAMTIA 241

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           E+F   G +VL + DSITRFA + RE+A  +GE P  RG+P S   ++ RL ER GP   
Sbjct: 242 EHFRDNGRHVLFLADSITRFAEAHREVAVAAGETPALRGFPPSTAHQIMRLAERAGPGLP 301

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT V SVLV G +  +PIAD +R +LDGH+VL+R ++E GR+P +D L SVSR   
Sbjct: 302 GQGDITGVFSVLVAGSDMEEPIADILRGVLDGHVVLSREISERGRFPAIDVLRSVSRSLP 361

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +A + +E  ++    HL+  +  +  +   G YR G D +LD+A+   P +  F
Sbjct: 362 EAATEEENAVLLQARHLLGAYARSETMIRAGLYREGEDPVLDQAIRAWPELDAF 415


>gi|237714632|ref|ZP_04545113.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. D1]
 gi|262406497|ref|ZP_06083046.1| ATP synthase F1, alpha subunit [Bacteroides sp. 2_1_22]
 gi|294646111|ref|ZP_06723774.1| ATP synthase F1, alpha subunit [Bacteroides ovatus SD CC 2a]
 gi|294808294|ref|ZP_06767052.1| ATP synthase F1, alpha subunit [Bacteroides xylanisolvens SD CC 1b]
 gi|298481158|ref|ZP_06999352.1| ATP synthase F1, alpha subunit [Bacteroides sp. D22]
 gi|229445401|gb|EEO51192.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. D1]
 gi|262355200|gb|EEZ04291.1| ATP synthase F1, alpha subunit [Bacteroides sp. 2_1_22]
 gi|292638555|gb|EFF56910.1| ATP synthase F1, alpha subunit [Bacteroides ovatus SD CC 2a]
 gi|294444513|gb|EFG13222.1| ATP synthase F1, alpha subunit [Bacteroides xylanisolvens SD CC 1b]
 gi|295084028|emb|CBK65551.1| proton translocating ATP synthase, F1 alpha subunit [Bacteroides
           xylanisolvens XB1A]
 gi|298272732|gb|EFI14299.1| ATP synthase F1, alpha subunit [Bacteroides sp. D22]
          Length = 527

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 97/446 (21%), Positives = 170/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINANVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIRVGEGMLGRVIDPLGEPLDGKGLIGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 128 YDMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +           +VVV AT+ +   L+  AP
Sbjct: 188 NQRTNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGALDYTVVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIISQEEVAREMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGTRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITALTIDKGRKNGQLLIQPQ 450


>gi|150035731|gb|ABR67211.1| ATP synthase beta subunit [Anomochloa marantoidea]
          Length = 479

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      VT    +   + + +V + +++         +V ++  +  V    + 
Sbjct: 2   GRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTASKQITVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 358

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|119368180|dbj|BAF40430.1| ATP synthase beta subunit [Camptostylus mannii]
          Length = 489

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917388|dbj|BAF40496.1| ATP synthase beta subunit [Diporidium greveanum]
          Length = 489

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|118917390|dbj|BAF40497.1| ATP synthase beta subunit [Gomphia serrata]
 gi|119368008|dbj|BAF40498.1| ATP synthase beta subunit [Ochna serrulata]
          Length = 489

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|1352029|sp|P07137|ATPB_IPOBA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|58336|emb|CAA29393.1| unnamed protein product [Ipomoea batatas]
          Length = 490

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+    ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRGNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGYLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETARGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|58699771|ref|ZP_00374411.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58533712|gb|EAL58071.1| ATP synthase F1, alpha subunit [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 402

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 99/396 (25%), Positives = 176/396 (44%), Gaps = 20/396 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E +   +  +  G + S+T     V  L +    G+ V      S   G V+ 
Sbjct: 12  SIIREKVETFDNPIKRENIGEVISVTDGIALVYGLEK-AKFGEKVFFA---SGVEGIVLD 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++ D   I  +G   ++  GD+V   G   ++       GRV+NALG P+D    + +  
Sbjct: 68  LDHDTAGIVVLGNDRDVKEGDVVKCSGDVVQVPVGHELLGRVVNALGHPMDDGGEI-RAK 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL------ 177
             M+I SK P  ++R+ V +  +TGI++ID+  P+  GQR  +     IGK+T+      
Sbjct: 127 NRMDIESKAPGIIDRKSVHEPLQTGIKIIDLLIPIGRGQRELIIGDRQIGKTTIALDTII 186

Query: 178 ----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
               ++     +     +   +G++   V + +         + + VVVA++ +   ++ 
Sbjct: 187 NQKKINDEVNENQKVYCVYVAIGQKISTVAKVVNKLKESGALEYTTVVVASASDCAPMQF 246

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP    TI E+F   G + L+I D +++ A + R+++      P    YP  +F    R
Sbjct: 247 LAPYAGCTIGEFFRDNGMHCLIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDIFYVHSR 306

Query: 293 LLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +KG    TA+  V     + +  +  +V SI DG I L   L  +G  P 
Sbjct: 307 LLERAAKMSDKKGQGSLTALPIVETQAGDVSAYVPTNVISITDGQIFLESELFYKGFRPA 366

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           V+   SVSR+   A     KK+  S+   + ++ E 
Sbjct: 367 VNIGLSVSRVGSAAQLKSVKKVAGSIKLSLAQYREL 402


>gi|319407766|emb|CBI81413.1| ATP synthase beta chain [Bartonella sp. 1-1C]
          Length = 530

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 108/432 (25%), Positives = 189/432 (43%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I  +      V    +   + + +      +  + +V   +  + V    +   E + 
Sbjct: 58  GEIRQVIGAVVDVHFEGELPHILNALETDNLGNKLVLEVAQHLGENTVRTIAMDTTEGLV 117

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V+  G +  +       GR++N +G+P+D    L        I  + P  + +   
Sbjct: 118 RGQKVYDTGAQICVPVGEATLGRIMNVIGEPVDDAG-LIMATKKRSIHQEAPQYVEQSTE 176

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 177 SEILVTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 236

Query: 199 GREVREFIEDYLGDNL------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            RE  +   + +   +             K  +V    +E P  R    L+ +TIAE F 
Sbjct: 237 TREGNDLYYEMIESRVNVDPRENGSTIGSKCALVYGQMNEPPGARARVALSGLTIAENFR 296

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+
Sbjct: 297 DEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGS 354

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D    
Sbjct: 355 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIV 414

Query: 367 ADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
            +E   +   +  ++ R++  +DI  I G     +      V +   I  FL Q      
Sbjct: 415 GEEHYTVACQVQTILQRYKSLQDIIAILGMDELSEED-KLLVARARKIERFLSQP---FH 470

Query: 426 SEDVFQEITKKL 437
             + F     KL
Sbjct: 471 VAEAFTGAPGKL 482


>gi|110677657|ref|YP_680664.1| flagellum-specific ATP synthase [Roseobacter denitrificans OCh 114]
 gi|109453773|gb|ABG29978.1| flagellum-specific ATP synthase [Roseobacter denitrificans OCh 114]
          Length = 449

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 158/428 (36%), Positives = 242/428 (56%), Gaps = 3/428 (0%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           A+    N V   G +  + +    ++ L+    +GD VV   +     G++++++ D + 
Sbjct: 12  AQITELNPVRSIGRVCRVEAGVIHISGLAGKARIGDLVVVYRQGEPLSGEILQLDGDTLV 71

Query: 72  ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
           I P    E ++L D         I+PS  W GR+I+  G PIDG   L +G  +  + S 
Sbjct: 72  ILPDQDAEGVALNDRAALLEARGIAPSQGWIGRIIDPFGNPIDGK-PLLRGAEARSLRSA 130

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P    R+ +     TG+ V++   P+  GQR+G+FAGSG+GKS+LL   A++   D V+
Sbjct: 131 PPEPALRRPMGTRLNTGMSVLNTMLPVVKGQRVGLFAGSGVGKSSLLGHLAQNMTADVVV 190

Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           ++L+GERGRE+R F+E+ LG + LK+SVV+ ATSD+SP++R+     A+++AE+F   G 
Sbjct: 191 VALIGERGRELRHFVEEVLGPEGLKRSVVICATSDQSPLIRRRCAWAAMSVAEHFRDMGL 250

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           + L++ DSITRFA + RE+A  SGE PV RGYP S    +  L ER GP E  +G+IT +
Sbjct: 251 SALILADSITRFAEAHREVAVASGEAPVLRGYPPSTAHLIMSLCERAGPGEGAQGDITGI 310

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            SVLV G +  +PIAD +R +LDGHIVLNR +AE GRYP +D L S+SR    A    E 
Sbjct: 311 FSVLVAGSDMEEPIADILRGVLDGHIVLNREIAERGRYPAIDVLKSISRSLPAAADDIEN 370

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +L+S +   +  +E+   +   G Y  G D  +D A+     +  F    P      + F
Sbjct: 371 ELISIVRRYLSIYEQNEMMIRAGLYSQGSDPDIDAAIQVWSDLDAFFA-KPEKQDVSNSF 429

Query: 431 QEITKKLQ 438
            ++   L+
Sbjct: 430 SQLELLLR 437


>gi|14718240|gb|AAK72858.1| ATP synthase beta subunit [Tamarix pentandra]
          Length = 488

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 43  GRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRI 102

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 103 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 161

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 162 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 221

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 222 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 281

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 282 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 339

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I
Sbjct: 340 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAI 399

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 400 LGLDELSEED-RLTVARARKIERFLSQP 426


>gi|32815645|gb|AAP88219.1| ATP synthase beta subunit [Carya ovata]
          Length = 457

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTTGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|5758917|gb|AAD50891.1| ATP synthase beta subunit [Tapeinochilos ananassae]
          Length = 496

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    L     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPLDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085219|gb|AAX63012.1| ATP synthase beta subunit [Dillenia philippinensis]
          Length = 482

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V        +       GR
Sbjct: 41  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTEAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|317011553|gb|ADU85300.1| flagellum-specific ATP synthase [Helicobacter pylori SouthAfrica7]
          Length = 434

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 158/423 (37%), Positives = 231/423 (54%), Gaps = 9/423 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76
           +L  + G +  I          +  V  GD V + +   S+ +G V+ +  +     P  
Sbjct: 15  DLSPRYGSVKKIMPNIVYANGFNPSV--GDVVKIEKSDGSECVGMVVVVEKEQFGFTPFN 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E    GD V                GRV+N LG+ ID   +L    L+  +++     
Sbjct: 73  FIEGSRAGDKVLFLKEGLNFPVGHNLLGRVLNPLGQVIDNKGALDYERLA-PVITTPIAP 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           + R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M  R       +I+L+
Sbjct: 132 LKRGLIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALI 191

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GERGRE+ EFIE  L  +L   V+V ATSD+SP++RK     A+++AEYF ++G +VL I
Sbjct: 192 GERGREIPEFIEKNLQGDLSSCVLVAATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFI 251

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + REI    GE P ++GYP S  S LP+L+ER G  E  KG+ITA  SVLV
Sbjct: 252 MDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGKEEG-KGSITAFFSVLV 310

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ +DPIAD  RSILDGHIVL+R L + G YPPV+ L S SR+A    S  +      
Sbjct: 311 EGDDLSDPIADQARSILDGHIVLSRELTDYGIYPPVNILNSASRVAKDIISESQNLYARK 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
              L    +E   +  IG Y+ G D  LD+A+ +  ++  FL Q  + L     F++  K
Sbjct: 371 FRRLYALLKENEMLIRIGSYQMGNDKELDEAISKKALMEQFLAQDENALQ---PFEQSVK 427

Query: 436 KLQ 438
           +L+
Sbjct: 428 QLE 430


>gi|260869686|ref|YP_003236088.1| translocator EscN [Escherichia coli O111:H- str. 11128]
 gi|221361425|emb|CAX18578.1| Type III secretion system, ATPase, LEE associated [Escherichia
           coli]
 gi|257766042|dbj|BAI37537.1| translocator EscN [Escherichia coli O111:H- str. 11128]
 gi|323178908|gb|EFZ64484.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 1180]
          Length = 446

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 156/409 (38%), Positives = 229/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I++I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKITNIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 88

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P++ + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPMESNIAAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  +     +  IG Y  G D   DKA+    +I  F++QS  D+SS +
Sbjct: 387 IATYNNVELLIRIGEYTMGQDPEADKAIKNRKLIQSFIQQSTKDISSYE 435


>gi|155029289|dbj|BAF75525.1| ATP synthase beta subunit [Neoscortechinia kingii]
          Length = 489

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF       VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQYVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|124361734|gb|ABN09309.1| ATP synthase beta subunit [Diospyros rigida]
          Length = 464

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|30351887|emb|CAD48096.1| ATP synthase beta subunit [Dipcadi heterocuspe]
          Length = 497

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708143|emb|CAB89948.1| ATP synthase beta subunit [Alangium sp. Chase 2541]
          Length = 489

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVXDVAFPPGKMPNIYNALVVKG--RDTAGQPINVXCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7708478|emb|CAB89928.1| ATP synthase beta subunit [Lloydia serotina]
          Length = 494

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ QG   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMXNIYNALIVQG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL++D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLVIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|6815115|dbj|BAA90397.1| ATP synthase beta subunit [Oryza sativa (japonica cultivar-group)]
          Length = 498

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 178/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVV----HQGKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT     +       VV      GK  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTVAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|164424839|ref|XP_963253.2| ATP synthase beta chain, mitochondrial precursor [Neurospora crassa
           OR74A]
 gi|114555|sp|P23704|ATPB_NEUCR RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|14126|emb|CAA37756.1| unnamed protein product [Neurospora crassa]
 gi|168763|gb|AAA33562.1| mitochondrial ATPase beta-subunit [Neurospora crassa]
 gi|7801084|emb|CAB91479.1| H+-transporting ATP synthase (EC 3.6.1.34) beta chain [Neurospora
           crassa]
 gi|157070684|gb|EAA34017.2| ATP synthase beta chain, mitochondrial precursor [Neurospora crassa
           OR74A]
          Length = 519

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 186/428 (43%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V     +   + + +  Q      + +V   +  ++V    +   E +
Sbjct: 49  GKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGL 108

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    I       GR+IN  G PID    + K D    I ++ P  + +  
Sbjct: 109 VRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPI-KTDKFRPIHAEAPEFVEQST 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 168 TAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGE 227

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   +         D   K  +V    +E P  R    LT +TIAEYF  +   
Sbjct: 228 RTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQ 287

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++  ++ ++ ERI  +   KG+IT+V
Sbjct: 288 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGQMQERI--TTTTKGSITSV 345

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      + 
Sbjct: 346 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEH 405

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            +  + +  ++  ++  +DI  I G     +      V +   I  FL Q     +   V
Sbjct: 406 YETATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP---FTVAQV 461

Query: 430 FQEITKKL 437
           F  I  KL
Sbjct: 462 FTGIEGKL 469


>gi|110915568|gb|ABH02572.1| ATP synthase beta subunit [Agrostis tenerrima]
          Length = 490

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITXIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910800|gb|ABI48132.1| ATPase beta subunit [Plagiochila porelloides]
          Length = 456

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEIDVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL--------KKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +     +         K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEQNISZSKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALPGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAISGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|37721013|gb|AAN32509.1| ATP synthase beta subunit [Asparagus officinalis]
          Length = 476

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 31/420 (7%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G     +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG----RVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|5758867|gb|AAD50841.1| ATP synthase beta subunit [Costus malortieanus]
 gi|5758887|gb|AAD50861.1| ATP synthase beta subunit [Heliconia latispatha]
          Length = 496

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085116|gb|AAX62964.1| ATP synthase beta subunit [Croizatia brevipetiolata]
          Length = 482

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|62085217|gb|AAX63011.1| ATP synthase beta subunit [Denhamia celastroides]
          Length = 481

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 11  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 71  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|228994024|ref|ZP_04153925.1| ATP synthase subunit beta [Bacillus pseudomycoides DSM 12442]
 gi|228765672|gb|EEM14325.1| ATP synthase subunit beta [Bacillus pseudomycoides DSM 12442]
          Length = 464

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 181/406 (44%), Gaps = 12/406 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G ++ I      V      +        + Q   +  L   + +  D V    +   + +
Sbjct: 4   GRVTQIMGPVVDVKFDGGKLPEIYNALRIKQDAVNLTLEVALHLGDDTVRTVAMSSTDGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G+   +       GRV N LG  ID D  +        I  + P       
Sbjct: 64  VRGTAVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVPADVRRDPIHRQAPAFEELST 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 124 KVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGE 183

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      +KK+ +V    +E P  R+   LT +T+AE+F  +   +VLL 
Sbjct: 184 RTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG+IT++ +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D++ DP   +  + LD    L R L + G YP VDPLAS SR         +  ++  
Sbjct: 302 PADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R++E +DI  I G     +      V +   I  FL Q+
Sbjct: 362 QVQQTLQRYKELQDIIAILGMDEISEED-KLVVQRARRIQFFLSQN 406


>gi|158602247|gb|ABW74590.1| ATP synthase beta subunit [Anemone americana]
          Length = 493

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|32815655|gb|AAP88224.1| ATP synthase beta subunit [Pterocarya hupehensis]
          Length = 456

 Score =  280 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 27/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTTGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +  L   V +   I  FL Q 
Sbjct: 381 ILGLDELSEDRL--TVARARKIERFLSQP 407


>gi|183206634|gb|ACC54515.1| ATP synthase beta subunit [Nesocodon mauritianus]
          Length = 467

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LG+ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGEPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|157285057|gb|ABV31268.1| ATPase [Vibrio tubiashii]
          Length = 441

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|119350449|gb|ABL63175.1| AtpB [Ascochloris multinucleata]
          Length = 392

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 167/368 (45%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + +  G  V   G+   +       GR+ N LG+P+D    +  G+ +
Sbjct: 2   DNAVRAVSMQPTDGLMRGMEVIDTGKPLSVPVGRDTLGRIFNVLGEPVDNLGPVKPGE-T 60

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I    P   +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 61  LPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 120

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   +               K  +V    +E P  R   
Sbjct: 121 AKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLPDSKVALVYGQMNEPPGARMRV 180

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 181 ALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTL 240

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDP
Sbjct: 241 QERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDP 298

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +       +       S+   + R++E +DI  I G     +      V +   
Sbjct: 299 LESTSTMLQPWIVGEKHYSTAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARK 357

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 358 IERFLSQP 365


>gi|62902802|gb|AAY19316.1| ATP synthase beta subunit [Bhesa paniculata]
 gi|62902804|gb|AAY19317.1| ATP synthase beta subunit [Bhesa robusta]
          Length = 479

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 92  IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 150

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 151 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 211 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 271 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 329 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 388

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 389 ILGLDELSEED-RLIVARARKIERFLSQP 416


>gi|224830504|gb|ACN66347.1| ATP synthase beta chain [Cissampelos andromorpha]
          Length = 468

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D LGQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEXNXVESKVALVYGXMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|217976537|ref|YP_002360684.1| F0F1 ATP synthase subunit beta [Methylocella silvestris BL2]
 gi|217501913|gb|ACK49322.1| ATP synthase F1, beta subunit [Methylocella silvestris BL2]
          Length = 483

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/441 (24%), Positives = 186/441 (42%), Gaps = 26/441 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICP 74
                   GY++ +      V        + + +  +   +  + +V   +  + V    
Sbjct: 3   DAATNTPTGYVTQVIGAVVDVKFDGVLPEILNALETENGGNRLVLEVAQHLGENSVRCLA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           + + E ++ G  V   G    +       GR++N +G+ +D    +   D    I    P
Sbjct: 63  MDVSEGLTRGQAVRDTGAPITVPVGEGTLGRIMNVIGESVDEAGPILASDFRA-IHQLAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 122 TYAEQATEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 181

Query: 191 IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLT 237
           + + VGER RE  +   + +   +              K  +V     E P  R    LT
Sbjct: 182 VFAGVGERTREGNDLYYEMIESKVNLNPRENNGSAAGSKCALVYGQMSEPPGARARVALT 241

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +TIAE F  KG +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI
Sbjct: 242 GLTIAEDFRDKGQDVLFFVDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGALQERI 301

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +   KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S 
Sbjct: 302 --TTTTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDST 359

Query: 358 SRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+        +   +   +   + R++  +DI  I G     +      V +   I  F
Sbjct: 360 SRMLSPLIVGEEHYAVARQVQQTLQRYKGLQDIIAILGMDELSEED-KLTVARARKIERF 418

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L Q        +VF     KL
Sbjct: 419 LSQP---FHVAEVFTGSPGKL 436


>gi|186895141|ref|YP_001872253.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis PB1/+]
 gi|186698167|gb|ACC88796.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis PB1/+]
          Length = 472

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 160/468 (34%), Positives = 242/468 (51%), Gaps = 34/468 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 5   LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 62

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF------------------ 93
            +   +V+  N   +++ P+   E I  G  V+      G                    
Sbjct: 63  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSF 122

Query: 94  ---RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
              ++       GRV++   KP+DG  +  +      +++     + R  + +    G+R
Sbjct: 123 ASKQLPLGPELLGRVLDGSAKPLDGLPA-PETGYRAPLITPPINPLQRTAIVQVLDVGVR 181

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ L
Sbjct: 182 TINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENIL 241

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G +   +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REI
Sbjct: 242 GAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREI 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R
Sbjct: 302 ALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSAR 361

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGH+VL+R LAE G YP +D  AS+SR        D    V     L+  ++  RD+
Sbjct: 362 AILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDL 421

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +G Y  G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 422 VSVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFDDACQHLKGL 469


>gi|113910826|gb|ABI48145.1| ATPase beta subunit [Pellia epiphylla]
          Length = 464

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 108/394 (27%), Positives = 175/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           +V QG+N    GQ I +  ++        V    +   + +  G  V   G    +    
Sbjct: 17  LVIQGQNCA--GQEINVTCEVQQLLGNHRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGE 74

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + +  I    P           F+TGI+V+D+  P  
Sbjct: 75  ATLGRIFNVLGEPVDNLGPVD-ANTTFPIHRCAPAFTQLDTKLSIFETGIKVVDLLAPYR 133

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 134 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 193

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 194 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 253

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 254 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 311

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 312 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 371

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 404


>gi|20146550|gb|AAM12429.1| ATP synthase alpha subunit [Chimaphila umbellata]
          Length = 378

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 156/381 (40%), Gaps = 22/381 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   GI   I  GDLV   G     P      GR
Sbjct: 5   GEMVEFA---SGVKGIPLNLENENVGIVVFGIDTAIKEGDLVKRTGSIVDVPAGKAMLGR 61

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG PIDG  SL        +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 62  VVNGLGVPIDGRGSLSNH-XRRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRE 120

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 121 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 180

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++  AT+ +   L+ + P +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 181 ALEYSILXAATASDPAPLQFLGPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 240

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLE+      +   G++TA+  +     + +  I  +V S
Sbjct: 241 LRRPPGREAFPGDVFYLHSRLLEKAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 300

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + ++ E   + 
Sbjct: 301 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VA 357

Query: 391 LIGGYRPGVDLILDKAVHQVP 411
               +   +D      +++  
Sbjct: 358 AFAQFGSDLDAATQALLNRGA 378


>gi|300932367|ref|ZP_07147632.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1]
 gi|300459872|gb|EFK23365.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1]
          Length = 460

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 185/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q  N   + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP V PL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVAPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|296413156|ref|XP_002836282.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630095|emb|CAZ80473.1| unnamed protein product [Tuber melanosporum]
          Length = 480

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 188/432 (43%), Gaps = 21/432 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
             + G I  +      V    + +   L      +  N   L     +  ++V    +  
Sbjct: 7   SSRVGRIHQVIGAVVDVKFDGEQLPPILNALNTDKNGNKLVLEVAQHLGENVVRCIAMDG 66

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   +I       GR++N  G PID    +    ++  I ++ PP +
Sbjct: 67  TEGLVRGRAVHDTGAPIKIPVGPGTLGRIMNVTGDPIDERGPIKAAKMA-PIHAEAPPFV 125

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
           ++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+  
Sbjct: 126 DQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFT 185

Query: 195 -VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VGER RE  +   +         D   K  +V    +E P  R    LT +T+AEYF  
Sbjct: 186 GVGERTREGNDLYHEMQETRVIQLDGDSKVALVFGQMNEPPGARARVALTGLTVAEYFRD 245

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++ ++ ERI  +  +KG+
Sbjct: 246 EEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSVDMGQMQERI--TTTKKGS 303

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D    
Sbjct: 304 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPKIV 363

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +     + +  ++  ++  +DI  I G     +      V +   +  FL Q     +
Sbjct: 364 GEEHYNTATRVQRMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQP---FA 419

Query: 426 SEDVFQEITKKL 437
              VF  I   L
Sbjct: 420 VAQVFTGIEGAL 431


>gi|283853244|ref|ZP_06370495.1| ATPase, FliI/YscN family [Desulfovibrio sp. FW1012B]
 gi|283571349|gb|EFC19358.1| ATPase, FliI/YscN family [Desulfovibrio sp. FW1012B]
          Length = 441

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 156/419 (37%), Positives = 235/419 (56%), Gaps = 8/419 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVGI 77
               G +S +  +      +   V     ++    NS  +   +V+          P G 
Sbjct: 19  ARTFGKVSKVVGLIAEGRGIRSPVGSVCHLLSDDGNSVREVPAEVVGFRDGACLFMPYGD 78

Query: 78  GEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              I+ G L+ +     +      + GRVI+A G PIDG + +     +  + +  P  M
Sbjct: 79  LRGIAPGTLIRNTSTPPLFPVGRRYLGRVIDAFGTPIDGGEPIFPARFN-PVFADAPMPM 137

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           +R R+ +    G+R I+    L  GQR+G+ AGSG+GKSTL+ M AR+   D  +I LVG
Sbjct: 138 DRPRISEPMDVGVRAINGLLTLGKGQRVGIMAGSGVGKSTLMGMIARNTKADVNVIGLVG 197

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGRE+REFI +D   + + +SVVVVATSD+SP++R  A   A  +AE+F   G++V+L+
Sbjct: 198 ERGRELREFIEKDLGPEGMARSVVVVATSDQSPLIRMRAAYAATAMAEFFRDAGNDVILM 257

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA + RE+   +GE P  RGY  SVF++LP+LLER G +    G+IT + +VLV
Sbjct: 258 MDSVTRFAMAGREVGLAAGEPPTTRGYTPSVFAQLPKLLERAGRNNN--GSITGIYTVLV 315

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+ N+PIAD+VRSILDGHIVL R LA++G +P +D L S+SRL       D       
Sbjct: 316 DGDDFNEPIADAVRSILDGHIVLTRDLADQGHFPAIDVLKSISRLRSDVTPKDALAAGRD 375

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           L  L+  +    D+  IG Y  G +  +D+A+  +  I  +L+Q  ++  S E+ F  +
Sbjct: 376 LIRLLATYRRVEDMVNIGAYARGANPEIDRAIDMIGPINGYLRQEVAESQSLEESFAAV 434


>gi|227510137|ref|ZP_03940186.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190342|gb|EEI70409.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 487

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 117/392 (29%), Positives = 186/392 (47%), Gaps = 14/392 (3%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           VH   +   + +V + +   +V    +   + +  G  V +      +       GRV N
Sbjct: 39  VHVSDDKTLVVEVALDLGDGVVRTIAMDGTDGLRRGMEVENTESSISVPVGNDTLGRVFN 98

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG    G       I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 99  VLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRGGKVGLF 158

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+ L+     +       IS+   VGER RE  +   +  G  +  K+ +V   
Sbjct: 159 GGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKTAMVYGQ 218

Query: 224 SDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 219 MNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 279 QPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 336

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D      +   + + + H++ R+ E +DI  I G     D 
Sbjct: 337 TQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISILGMDELSDE 396

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                V++   I  FL QS    S  + F  +
Sbjct: 397 E-KTIVNRARRIQFFLSQS---FSVAEQFTGL 424


>gi|219552212|gb|ACL26821.1| ATP synthase beta chain [Phyllanthus acidus]
          Length = 423

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 115/431 (26%), Positives = 186/431 (43%), Gaps = 32/431 (7%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414

Query: 421 PSDLSSEDVFQ 431
                  DVF 
Sbjct: 415 ---FFVADVFT 422


>gi|154001282|gb|ABS57116.1| ATP synthase beta subunit [Araucaria cunninghamii]
          Length = 419

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  VF  G    +       GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMKVFDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-ARAKS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + S VGER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGCLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  ++   +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYEIAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|118917342|dbj|BAF40456.1| ATP synthase beta subunit [Macaranga tanarius]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MNATDGLTRGMEVIDTGTPLSVPVGGVTLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|37720961|gb|AAN32483.1| ATP synthase beta subunit [Hydrothrix gardneri]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRVAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|62085196|gb|AAX63002.1| ATP synthase beta subunit [Suregada boiviniana]
          Length = 482

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDAGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|37729416|gb|AAN71674.1| ATP synthase beta subunit [Rhoiptelea chiliantha]
          Length = 472

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KGRDTTGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGASLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 99  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYPRGGKI 157

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 158 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 218 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 336 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 395

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 396 ILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|227513066|ref|ZP_03943115.1| F0F1 ATP synthase subunit beta [Lactobacillus buchneri ATCC 11577]
 gi|227083641|gb|EEI18953.1| F0F1 ATP synthase subunit beta [Lactobacillus buchneri ATCC 11577]
          Length = 487

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 117/392 (29%), Positives = 186/392 (47%), Gaps = 14/392 (3%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           VH   +   + +V + +   +V    +   + +  G  V +      +       GRV N
Sbjct: 39  VHVSDDKTLVVEVALDLGDGVVRTIAMDGTDGLRRGMEVENTESSISVPVGNDTLGRVFN 98

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG    G       I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 99  VLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRGGKVGLF 158

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+ L+     +       IS+   VGER RE  +   +  G  +  K+ +V   
Sbjct: 159 GGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKTAMVYGQ 218

Query: 224 SDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 219 MNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 279 QPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 336

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D      +   + + + H++ R+ E +DI  I G     D 
Sbjct: 337 TQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISILGMDELSDE 396

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                V++   I  FL QS    S  + F  +
Sbjct: 397 E-KTIVNRARRIQFFLSQS---FSVAEQFTGL 424


>gi|155573939|dbj|BAF75535.1| ATP synthase beta subunit [Macaranga aleuritoides]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MNATDGLTRGMEVIDTGTPLSVPVGGVTLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|124361666|gb|ABN09275.1| ATP synthase beta subunit [Diospyros flavocarpa]
 gi|124361684|gb|ABN09284.1| ATP synthase beta subunit [Diospyros labillardierei]
          Length = 453

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVIKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|113910798|gb|ABI48131.1| ATPase beta subunit [Lophocolea heterophylla]
          Length = 472

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V +G+N+   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVAFSPGKMPNIYNSLVVRGQNAA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRAAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|7708538|emb|CAB89952.1| ATP synthase beta subunit [Phytolacca dioica]
          Length = 485

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 48  KGRDTAGQPINVXCEVQQLLGNNRVRAVAMSATDGLTRGMEVSDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|15425590|emb|CAC60270.1| ATP synthase beta subunit [Phyllachne uliginosa]
          Length = 470

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  G+ I +  ++        V    +   + ++ G  V        +       GR
Sbjct: 22  KGRDTAGEPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTEAPLSVPVGGATLGR 81

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 82  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 140

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 141 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 200

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 201 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 260

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 261 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 318

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 319 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 378

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 379 ILGLDELSEED-RLTVARARKIERFLSQP 406


>gi|5758919|gb|AAD50893.1| ATP synthase beta subunit [Typha latifolia]
          Length = 496

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D  GQ + +  ++        V    
Sbjct: 21  GRITQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTAGQQMNLTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4206574|gb|AAD11718.1| ATP synthase beta subunit [Phellodendron amurense]
          Length = 477

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDPVGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|39933253|ref|NP_945529.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris CGA009]
 gi|192288604|ref|YP_001989209.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris TIE-1]
 gi|81829803|sp|Q6NDD2|ATPB_RHOPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|39652878|emb|CAE25620.1| putative H+-transporting ATP synthase beta chain [Rhodopseudomonas
           palustris CGA009]
 gi|192282353|gb|ACE98733.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris TIE-1]
          Length = 476

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           Q G I+ +      V        + + +  +  ++  + +V   +    V    +   E 
Sbjct: 7   QTGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEG 66

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +   A   GR++N +G+P+D    + K +    I  + P   ++ 
Sbjct: 67  LVRGQEVTDTGAPISVPVGAGTLGRIMNVIGEPVDEQGPI-KSEGLRAIHQEAPAYTDQS 125

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 126 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAGVG 185

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +++        G    K  +V    +E P  R    LT +T+AE+F  +
Sbjct: 186 ERTREGNDLYHEFIESGVNKKGGGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQ 245

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 246 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSIT 303

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        
Sbjct: 304 SVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSASIVGE 363

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +  ++ +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 364 EHYNTARMVQQILQKYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQP 415


>gi|210075206|ref|XP_500475.2| YALI0B03982p [Yarrowia lipolytica]
 gi|199425131|emb|CAG82701.2| YALI0B03982p [Yarrowia lipolytica]
          Length = 509

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 114/432 (26%), Positives = 190/432 (43%), Gaps = 22/432 (5%)

Query: 21  VQGGYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           V  G I ++      V     +    L    + +G+ +  + +V   +  + V    +  
Sbjct: 38  VGSGKIRTVIGAVVDVQFEQDNLPAILNALTIDRGEGNKLVLEVAQHLGENTVRTIAMDG 97

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    I       GR+IN  G+PID    +      + I +  P   
Sbjct: 98  TEGLVRGTSVADTGAPITIPVGRGTLGRIINVCGEPIDERGPIEATKF-LPIHADPPTFA 156

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +         +  
Sbjct: 157 EQSTTAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFC 216

Query: 194 LVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  
Sbjct: 217 GVGERTREGNDLYREMKETGVINLEGESKVTLVFGQMNEPPGARARVALTGLTIAEYFRD 276

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+
Sbjct: 277 EEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGS 334

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAW 365
           +T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D    
Sbjct: 335 VTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDIDVV 394

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   + S++   +  ++  +DI  I G     +      V +   I  FL Q     +
Sbjct: 395 GQEHYDVASNVQQTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FT 450

Query: 426 SEDVFQEITKKL 437
             +VF  I  +L
Sbjct: 451 VAEVFTGIEGRL 462


>gi|306922408|ref|NP_001182454.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Equus caballus]
          Length = 528

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 193/431 (44%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +  ++   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 415 TEHYEVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 470

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 471 AEVFTGHLGKL 481


>gi|305671633|gb|ADM63126.1| ATP synthase beta subunit [Coriandrum sativum]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMGVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910760|gb|ABI48112.1| ATPase beta subunit [Conocephalum conicum]
          Length = 472

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 34  GQEINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGAPLSVPVGESTLGRIFNVLG 93

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 94  EPVDNLGPV-EATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 152

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 153 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVAL 212

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 213 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 272

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 273 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 331 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 390

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 391 LSEED-RLTVARARKIERFLSQP 412


>gi|63091863|emb|CAH58782.1| ATP synthase alpha chain [Enterococcus canis]
 gi|63091865|emb|CAH58783.1| ATP synthase alpha chain [Enterococcus canis]
 gi|63091867|emb|CAH58784.1| ATP synthase alpha chain [Enterococcus canis]
          Length = 367

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 156/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+ +DG   + K D +  + +  P  M+RQ V++  +TG++ ID
Sbjct: 57  EVPVGEAMIGRVVNPLGQAVDGLGEI-KTDKTRPVEAPAPGVMDRQSVKEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKESTVRTQVETLKK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +  ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGAMDYTIVVTAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLNDKLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYSGVRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|24940176|emb|CAD43394.1| ATP synthase beta subunit [Echiochilon collenettei]
          Length = 483

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRVVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVXDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKXSGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNXQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|20146548|gb|AAM12428.1| ATP synthase alpha subunit [Actinidia arguta]
          Length = 368

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 90/373 (24%), Positives = 154/373 (41%), Gaps = 20/373 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + S+      V  L++ +  G+ V      S   G  + +    V I   G    I  
Sbjct: 1   GRVVSVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENKNVGIVVFGSDTYIKE 56

Query: 84  GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GDLV   G     P      GRV++ LG PIDG  SL   +    +  K P  + R+ V 
Sbjct: 57  GDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVH 115

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVI 191
           +  +TG++ +D   P+  GQR  +      GK+ +      +                 +
Sbjct: 116 EPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCV 175

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G 
Sbjct: 176 YVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGM 235

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G++T
Sbjct: 236 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLT 295

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V  I DG I L   L   G  P ++   SVSR+   A    
Sbjct: 296 ALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKA 355

Query: 369 EKKLVSSLTHLIH 381
            K++  S    + 
Sbjct: 356 MKQVCGSSKLELA 368


>gi|305671703|gb|ADM63161.1| ATP synthase beta subunit [Sinadoxa corydalifolia]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYDTAQMVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|255070295|ref|XP_002507229.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
 gi|226522504|gb|ACO68487.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas sp. RCC299]
          Length = 536

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 184/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V    +   +   +   G +   + +V   +  + V    +   E + 
Sbjct: 67  GRVTQVIGAVVDVQFDGELPPIMSALEVDGHDVRLVLEVAQHLGENTVRTIAMDTTEGLV 126

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G   +I       GR++N +G+PID    + +   ++ I  + PP +++   
Sbjct: 127 RGQGVVNTGSPIQIPVGRATLGRIMNVIGEPIDECGPI-ETSSTLAIHREAPPFVDQSTE 185

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +         + + VGER
Sbjct: 186 MEMLVTGIKVVDLLAPYQKGGKIGLFGGAGVGKTVFIMELINNIAKAHGGFSVFAGVGER 245

Query: 199 GREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
            RE  +   + +              K  +V    +E P  R    LT +T+AEYF    
Sbjct: 246 TREGNDLYHEMIEGGVIKLGNQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFE 305

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT
Sbjct: 306 GQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSIT 363

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+    A   
Sbjct: 364 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRMLSPLALGE 423

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +  ++  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 424 EHYATARGVQKVLQDYKNLQDIIAILGMDELSEED-KMTVSRARKVQRFLSQP 475


>gi|183206536|gb|ACC54466.1| ATP synthase beta subunit [Cyphia elata]
          Length = 487

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 10  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGKPINMTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYKEMKDSGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|119350457|gb|ABL63179.1| AtpB [Bracteacoccus minor]
          Length = 392

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 5   VRAVAMTPTDGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEPVDNMGPVNNQE-TLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLGDSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDANKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGVLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYDCAQNVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|113204646|gb|ABI34071.1| F1-ATP synthase beta subunit [Pacifastacus leniusculus]
          Length = 525

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 190/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G + ++      V    +   + + +  + +    + +V   +  + V    +   E
Sbjct: 55  VATGKVVAVIGAVVDVQFEGELPPILNSLEVENRTPRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+ V   G    I       GR+IN +G+PID    +   +    I ++ P  +N 
Sbjct: 115 GLVRGNAVRDTGSPISIPVGPGTLGRIINVIGEPIDERGPV-PTEFYSAIHAEAPDFVNM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDPNIIG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++  ++   +  +DI  I G     +      V +   I  FL Q 
Sbjct: 412 AEHYNVARAVQKILQDHKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 464


>gi|111283619|gb|ABH09181.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 356

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 89/356 (25%), Positives = 152/356 (42%), Gaps = 19/356 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V   G      G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFAGG---VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLG-D 212
            +      GK+ +      +                 +   +G++   V + ++     D
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKELNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAD 176

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREV 352


>gi|61968293|gb|AAX57073.1| ATP synthase beta subunit [Phyllanthus nummulariifolius]
 gi|61968295|gb|AAX57074.1| ATP synthase beta subunit [Phyllanthus nummulariifolius]
          Length = 479

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I+ I      V     Q   + + +V +G+++         +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQDTAGQQIYVTCEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|12004167|gb|AAG43923.1|AF213792_1 ATP synthase beta subunit [Theophrasta americana]
          Length = 487

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTEAALSVPVGGETLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 D-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QLRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758900|gb|AAD50874.1| ATP synthase beta subunit [Musella lasiocarpa]
          Length = 496

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G ++ I      V      +      FVV   K  D  GQ I +  ++        V   
Sbjct: 21  GRVAQIIGPVLDVFFPPGKMPNIYNAFVV---KGRDTAGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|224539742|ref|ZP_03680281.1| hypothetical protein BACCELL_04651 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518642|gb|EEF87747.1| hypothetical protein BACCELL_04651 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 528

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 94/427 (22%), Positives = 165/427 (38%), Gaps = 36/427 (8%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  ++     +  L +     + +            V+ +  D V    +G  ++I  
Sbjct: 31  GTVLQVSDGVARIYGL-RNAEANELLEFDNG---IKAIVMNLEEDNVGAVLLGPTDKIKE 86

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V    R   I       GRVI+ LG P+DG   +G     M +  K P  + RQ V 
Sbjct: 87  GYVVKRTKRIASIMVGEGMLGRVIDPLGSPLDGKGLIGGELCEMPLERKAPGVIFRQPVN 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD--KVIISLV 195
           +  +TG++ +D   P+  GQR  +      GK      T+++  A  +  D    I   +
Sbjct: 147 QPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAVDTIINQRANYEAGDPVYCIYVAI 206

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++G  V   +     +     ++VV AT+ +   L+  AP     I EYF   G + L+
Sbjct: 207 GQKGSTVATIVNTLRENGAMDYTIVVAATAGDPAALQYYAPFAGAAIGEYFRDTGRHALV 266

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE----------- 303
           + D +++ A + RE++           YP  +F    RLLER      +           
Sbjct: 267 VYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAARIINQEEVAREMNDLP 326

Query: 304 ---------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G++TA+  +     + +  I  +V SI DG I L+  L  +G  P ++  
Sbjct: 327 ESLKGRVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLDTDLFNQGNRPAINVG 386

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     KK+  +L     ++ E         +   +D +    + +     
Sbjct: 387 ISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFTKFSGDMDPVTALTIDKGQKNT 443

Query: 415 DFLKQSP 421
             L Q  
Sbjct: 444 RLLVQPQ 450


>gi|218900431|ref|YP_002448842.1| ATP synthase F1, beta subunit [Bacillus cereus G9842]
 gi|228903779|ref|ZP_04067896.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 4222]
 gi|228911144|ref|ZP_04074950.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 200]
 gi|226739977|sp|B7IQV8|ATPB_BACC2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218541996|gb|ACK94390.1| ATP synthase F1, beta subunit [Bacillus cereus G9842]
 gi|228848507|gb|EEM93355.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 200]
 gi|228855868|gb|EEN00411.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 4222]
          Length = 468

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  L 
Sbjct: 48  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGELP 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 346 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|156530091|gb|ABU75142.1| AtpB [Zanthoxylum sp. Clayton 15]
          Length = 480

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 32  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 91

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + + LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 92  IFDVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 150

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 151 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 211 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 271 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 329 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 388

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 389 ILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|113910818|gb|ABI48141.1| ATPase beta subunit [Leucolejeunea clypeata]
          Length = 468

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 32  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGAPLSVPVGEATLGRIFNVLG 91

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D   S+ +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 92  EPVDNLGSV-EASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 150

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 151 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEESISDSKVAL 210

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 211 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 270

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 271 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 328

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 329 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 388

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 389 LSEED-RLTVARARKIERFLSQP 410


>gi|5758885|gb|AAD50859.1| ATP synthase beta subunit [Heliconia indica]
          Length = 496

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|77166520|ref|YP_345045.1| F0F1 ATP synthase subunit beta [Nitrosococcus oceani ATCC 19707]
 gi|254435893|ref|ZP_05049400.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27]
 gi|118573708|sp|Q3J6N1|ATPB_NITOC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|76884834|gb|ABA59515.1| ATP synthase F1 subcomplex beta subunit [Nitrosococcus oceani ATCC
           19707]
 gi|207089004|gb|EDZ66276.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27]
          Length = 458

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 176/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+P+D    +G+ +
Sbjct: 45  LGDGVVRTIAMGGSDGLRRGMAVTNTGAPISVPVGTKTLGRIMDVLGEPVDEAGPVGEEE 104

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 105 -RWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +     +  K  +V    +E P  R    LT +
Sbjct: 164 NIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLDKVSLVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE+F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 224 TMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 281

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR
Sbjct: 282 TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSR 341

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++  ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 342 QLDPLIVGQEHYQVARAVQGNLQRYKELKDIIAILGMDELSEED-KLTVSRARKIQRFLS 400

Query: 419 QS 420
           Q 
Sbjct: 401 QP 402


>gi|290490144|gb|ADD31479.1| ATP synthase CF1 beta subunit protein [Aucuba japonica]
          Length = 498

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|269203739|ref|YP_003283008.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           ED98]
 gi|262076029|gb|ACY12002.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           ED98]
          Length = 470

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   +  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRMQFFLSQN 410


>gi|209551224|ref|YP_002283141.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|226740665|sp|B5ZSN7|ATPB_RHILW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|209536980|gb|ACI56915.1| ATP synthase F1, beta subunit [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 478

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/413 (24%), Positives = 183/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G ++ +      V    +   + + +         + +V   +  + V    +   E 
Sbjct: 11  SVGRVTQVIGAVVDVAFEGELPKILNALETTNNGVRLVLEVAQHLGENEVRTIAMDSSEG 70

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR++N +G+P+D    L        I    P  + + 
Sbjct: 71  LVRGQEVSDTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTA-HKRAIHQDAPSYVEQS 129

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 130 TEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 189

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   + +        G    K+ +V    +E P  R    LT +T+AE+F  +
Sbjct: 190 ERTREGNDLYHEMIESNVNKHGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQ 249

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +     +IT
Sbjct: 250 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTTTG--SIT 307

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      
Sbjct: 308 SVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGE 367

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +   + R++  +DI  I G     +     AV +   I  FL Q 
Sbjct: 368 EHYEVARKVQSTLQRYKALQDIIAILGMDELSEED-KIAVARARKIERFLSQP 419


>gi|155029313|dbj|BAF75540.1| ATP synthase beta subunit [Philyra brasiliensis]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|37720959|gb|AAN32482.1| ATP synthase beta subunit [Dasypogon hookeri]
          Length = 488

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|312210461|emb|CBX90548.1| similar to mitochondrial ATP synthase beta subunit [Leptosphaeria
           maculans]
          Length = 519

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/436 (25%), Positives = 182/436 (41%), Gaps = 21/436 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQVIRINLDIVYIC 73
           ++    + G I ++      V   ++     L       G N   L     +  +IV   
Sbjct: 42  TEASSTKEGKIHTVIGAVVDVKFDTEQLPAILNALTTDNGGNKLVLEVAQHLGENIVRCI 101

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   E +  G      G   ++       GR++N  G PID    + K      I +  
Sbjct: 102 AMDGTEGLVRGAKATDTGSPIKVPVGHGTLGRIMNVTGDPIDERGPI-KATKYAPIHADP 160

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P    +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        
Sbjct: 161 PAFTEQATSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGF 220

Query: 193 SL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           S+   VGER RE  +   +         D   K  +V    +E P  R    LT +T+ E
Sbjct: 221 SVFTGVGERTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGARARVALTGLTLCE 280

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  + K
Sbjct: 281 YFRDVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAIDMGLMQERITTTSK 340

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D
Sbjct: 341 --GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLD 398

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                 D     + +  ++  ++  +DI  I G     +      V +   I  FL Q  
Sbjct: 399 PRVIGDDHYNTATKVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP- 456

Query: 422 SDLSSEDVFQEITKKL 437
              +   VF  I  KL
Sbjct: 457 --FAVAQVFTGIEGKL 470


>gi|291617851|ref|YP_003520593.1| FliI [Pantoea ananatis LMG 20103]
 gi|291152881|gb|ADD77465.1| FliI [Pantoea ananatis LMG 20103]
          Length = 463

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 153/421 (36%), Positives = 226/421 (53%), Gaps = 15/421 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ----VIRINLDIVYICPV 75
           + + G ++  T +    T L   + LG   V +  +  ++ +    V+  N   + + P+
Sbjct: 35  IRRYGRLTRATGLVLEATGL--QLPLGSTCVIERNDGKSISEIESEVVGFNGQKLLMMPL 92

Query: 76  GIGEEISLGDLVFHWGRFRISPSACWCG-------RVINALGKPIDGDDSLGKGDLSMEI 128
              + I  G  V+         +            RV++  G+P+DG  S  +      +
Sbjct: 93  EEVDGILPGARVYARATGENPQAGKQLLLGPQLLGRVLDGSGRPLDGLPS-PETGYRAAL 151

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            +     + R  +     TG+R I+    +  GQR+G+FAGSG+GKS LL M AR    D
Sbjct: 152 NTPPFNPLQRTPITDVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQAD 211

Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR      A  IAE F  
Sbjct: 212 VIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRLQGAAYATRIAEDFRD 271

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G      G+I
Sbjct: 272 RGKHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIDGGGSI 331

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR        
Sbjct: 332 TAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTSLIDE 391

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +    V     L+  F+  RD+  +G Y  G D +LDKA+   P +  FL+Q   + S  
Sbjct: 392 NHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDPMLDKAIQLYPQMEAFLQQGIFERSEY 451

Query: 428 D 428
           D
Sbjct: 452 D 452


>gi|224830526|gb|ACN66358.1| ATP synthase beta chain [Cyclea burmanii]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D LGQ I +  ++        V    +   + 
Sbjct: 21  IGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVAMSATDG 78

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 79  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 137

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 138 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 197

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 198 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 257

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 258 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 316 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 375

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|219552188|gb|ACL26809.1| ATP synthase beta chain [Glochidion obovatum]
 gi|219552192|gb|ACL26811.1| ATP synthase beta chain [Phyllanthus roseus]
 gi|219552194|gb|ACL26812.1| ATP synthase beta chain [Breynia disticha]
 gi|219552196|gb|ACL26813.1| ATP synthase beta chain [Breynia oblongifolia]
 gi|219552198|gb|ACL26814.1| ATP synthase beta chain [Breynia vitis-idaea]
 gi|219552200|gb|ACL26815.1| ATP synthase beta chain [Breynia retusa]
 gi|219552202|gb|ACL26816.1| ATP synthase beta chain [Breynia fruticosa]
 gi|219552204|gb|ACL26817.1| ATP synthase beta chain [Sauropus granulosus]
 gi|219552206|gb|ACL26818.1| ATP synthase beta chain [Sauropus androgynus]
 gi|219552208|gb|ACL26819.1| ATP synthase beta chain [Sauropus brevipes]
 gi|219552210|gb|ACL26820.1| ATP synthase beta chain [Sauropus quadrangularis]
 gi|219552214|gb|ACL26822.1| ATP synthase beta chain [Phyllanthus emblica]
 gi|219552216|gb|ACL26823.1| ATP synthase beta chain [Phyllanthus lepidocarpus]
 gi|219552218|gb|ACL26824.1| ATP synthase beta chain [Phyllanthus humbertii]
 gi|219552220|gb|ACL26825.1| ATP synthase beta chain [Phyllanthus marojejiensis]
          Length = 423

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|156530143|gb|ABU75168.1| AtpB [Leitneria floridana]
          Length = 487

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 20  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINMTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKAAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|113910758|gb|ABI48111.1| ATPase beta subunit [Reboulia hemisphaerica]
          Length = 472

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 34  GZEINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGAPLTVPVGEATLGRIFNVLG 93

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 94  EPVDNLGPV-EVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 152

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 153 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 212

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 213 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 272

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 273 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 331 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 390

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 391 LSEED-RLTVARARKIERFLSQP 412


>gi|313899126|ref|ZP_07832651.1| ATP synthase F1, beta subunit [Clostridium sp. HGF2]
 gi|312956066|gb|EFR37709.1| ATP synthase F1, beta subunit [Clostridium sp. HGF2]
          Length = 466

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 116/419 (27%), Positives = 198/419 (47%), Gaps = 28/419 (6%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDF------VVHQGKNSDNLGQVIR----INLD 68
           +    G I  +      V   +     GD       +    K+S++L  V+     I  +
Sbjct: 1   MSKNTGKIVQVIGPVVDVAFEN-----GDLPQLLTAIEIPLKDSESL--VVEVAQHIGDE 53

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +G  + +  G      G   R+       GR+ N LG+ IDG   +G  + ++ 
Sbjct: 54  RVRCIAMGGTDGLVRGMEAIDTGSAIRVPVGKEILGRMFNVLGREIDGLGPVG-TENTLP 112

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  + P    +Q   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 113 IHRQAPGFEEQQTSAEMLETGIKVIDLLCPYSKGGKIGLFGGAGVGKTVLIQELIHNIAK 172

Query: 188 DKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     +++ VGER RE  +   +     +  K+V+V    +ESP  R    LT +T+AE
Sbjct: 173 EHGGMSVVTGVGERTREGNDMYHEMKDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAE 232

Query: 244 YFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  
Sbjct: 233 YFRDHDHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TST 290

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT+V ++ V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ D
Sbjct: 291 KDGSITSVQAIYVPADDLTDPAPATAFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILD 350

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  ++   +  ++ R++E +DI  I G     +      V++   + +FL Q 
Sbjct: 351 PLVVGEEHYEVARGVQTILQRYKELQDIIAILGMDELSEED-KIIVNRARRVRNFLSQP 408


>gi|119368040|dbj|BAF40533.1| ATP synthase beta subunit [Oxalis corniculata]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  +    +   E +  G  V   G    +       GR+ N LG
Sbjct: 48  GQQIDVTCEVQQLLGNNRIRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLG 107

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +PID    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 108 EPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 166

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 167 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVAL 226

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 227 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 286

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 287 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 345 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDE 404

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 405 LSEED-RLTVARARKIERFLSQP 426


>gi|8132536|gb|AAF73294.1| ATP synthase beta subunit [Zamia furfuracea]
          Length = 486

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGQDTAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-ARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDIS 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 RSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|4731153|gb|AAD28366.1|AF095732_1 ATP synthase beta subunit [Dillenia retusa]
          Length = 487

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 29/422 (6%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYI 72
             G I+ I      V     +   + + ++  G   D  GQ I +  ++        V  
Sbjct: 17  SXGRIAQIIGPVLDVAFPPGKMPNIYNALLVXG--RDTAGQXINVTCEVQQLLGNNRVRA 74

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V        +       GR+ N LG+PID    +     +  I   
Sbjct: 75  VAMSATDGLMRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRS 133

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 134 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 193

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 194 VSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALT 253

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 254 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 311

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 312 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 371

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 372 MLQPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLS 430

Query: 419 QS 420
           Q 
Sbjct: 431 QP 432


>gi|5758882|gb|AAD50856.1| ATP synthase beta subunit [Glomeropitcairnia penduliflora]
          Length = 496

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|194037554|ref|XP_001929445.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Sus scrofa]
          Length = 528

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 192/431 (44%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 470

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 471 AEVFTGHLGKL 481


>gi|8452749|emb|CAB89990.1| ATP synthase beta subunit [Simarouba glauca]
          Length = 477

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V  L  +   + + +V +G   B +GQ I +  ++        V    
Sbjct: 7   GHIAQIIGPVLDVAFLPGKMPNIYNALVVKG--RBTVGQPINMTCEVQQLLGNNRVXAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G      G    +       G + N LG+P+D    +     +  I    P
Sbjct: 65  MXATDGLTRGMEXIDTGAPLXVPVGGATLGXIFNVLGEPVDNLGPV-BTRTTSPIHKPAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +        F+TGI+V+B+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 124 AFIQLDTKLSIFETGIKVVBLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           I   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 IFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|14718036|gb|AAK72759.1| ATP synthase beta subunit [Duckeodendron cestroides]
          Length = 486

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 14  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDRGAPISVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 427


>gi|42559038|gb|AAS20205.1| ATP synthase beta subunit [Pandanus copelandii]
          Length = 484

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVN-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708302|emb|CAB90078.1| ATP synthase beta subunit [Eucommia ulmoides]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V    + +       VV      D  GQ I +  ++        V   
Sbjct: 19  GRIAQIIGPVLDVAFPPRKMPNIYNALVV---XGRDTAGQPINVTCEVQQLLGNNRVRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    
Sbjct: 76  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 135 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 313 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 372

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                       +   +   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 373 LQPGIVGAGHYNIAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|8452756|emb|CAB89994.1| ATP synthase beta subunit [Swietenia macrophylla]
          Length = 477

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  B +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 36  KGXBTVGQPINVTCEVQQLLGNNRVXAVAMIATDGLTRGMEVIDTGAPLSVPVGGATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 96  IFNVLGEPVDNLGPVDTLTTS-PIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 154

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 155 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 215 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 274

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 275 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 332

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 333 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 392

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 393 ILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|28193539|emb|CAD48597.1| F1F0-ATPase subunit beta [Lactobacillus hilgardii]
          Length = 481

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 117/392 (29%), Positives = 186/392 (47%), Gaps = 14/392 (3%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           VH   +   + +V + +   +V    +   + +  G  V +      +       GRV N
Sbjct: 33  VHVSDDKTLVVEVALDLGDGVVRTIAMDGTDGLRRGMEVENTESSISVPVGNDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG    G       I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+ L+     +       IS+   VGER RE  +   +  G  +  K+ +V   
Sbjct: 153 GGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKTAMVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D      +   + + + H++ R+ E +DI  I G     D 
Sbjct: 331 TQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISILGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                V++   I  FL QS    S  + F  +
Sbjct: 391 E-KTIVNRARRIQFFLSQS---FSVAEQFTGL 418


>gi|6467941|gb|AAF13240.1|AF197607_1 ATPase beta subunit [Kadsura japonica]
          Length = 487

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 18  GRITQIIGPVLDVAFPRGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 74

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 75  AMSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 134 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 193

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 194 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 253

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 254 AEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 311

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 312 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 371

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 372 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 430

Query: 420 S 420
            
Sbjct: 431 P 431


>gi|57868942|gb|AAW57467.1| ATP synthase beta subunit [Palaquium ferox]
          Length = 493

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 17  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGKPINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 430


>gi|50083469|ref|YP_044979.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ADP1]
 gi|299771942|ref|YP_003733968.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. DR1]
 gi|81393960|sp|Q6FFK0|ATPB_ACIAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|49529445|emb|CAG67157.1| membrane-bound ATP synthase , F1 sector, beta-subunit
           [Acinetobacter sp. ADP1]
 gi|298702030|gb|ADI92595.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. DR1]
          Length = 464

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLNVTSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  S+ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARSVQNVLQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|114571|sp|P07677|ATPB_BACP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|77453|pir||A25504 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           thermophilic bacterium PS-3
 gi|2981977|pdb|1SKY|E Chain E, Crystal Structure Of The Nucleotide Free Alpha3beta3 Sub-
           Complex Of F1-Atpase From The Thermophilic Bacillus Ps3
 gi|45804|emb|CAA28277.1| unnamed protein product [Bacillus sp. PS3]
 gi|45817|emb|CAA30655.1| unnamed protein product [Bacillus sp. PS3]
 gi|217147|dbj|BAA00066.1| thermophilic proton ATPase beta subunit [Bacillus sp. PS3]
          Length = 473

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID +  + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGQVTLGRVFNVLGEPIDLEGDIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   + LL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDGLLFIDNIFRFTQAGSEVSALLGRMPSAIGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPL 
Sbjct: 291 RI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLV 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLERYKELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|270313039|gb|ACZ73601.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 495

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 18  GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 74

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 75  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSA 133

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 134 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTXLIMELINNIAKAHGGV 193

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 194 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTM 253

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 254 AEYFRDGNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 311

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 312 STKEGSITSIQAVYVPADDLTDPAPATXFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 371

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 372 LQPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 430

Query: 420 S 420
            
Sbjct: 431 P 431


>gi|238755310|ref|ZP_04616653.1| Flagellum-specific ATP synthase [Yersinia ruckeri ATCC 29473]
 gi|238706446|gb|EEP98820.1| Flagellum-specific ATP synthase [Yersinia ruckeri ATCC 29473]
          Length = 454

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 161/447 (36%), Positives = 241/447 (53%), Gaps = 17/447 (3%)

Query: 5   LETLAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNL 59
           L TL +L E       V + G ++  T +    T L   + LG   + +    G+  +  
Sbjct: 9   LSTLDKLEERIVQSPTVRRYGRLTRATGLVLEATGL--QLPLGATCLIERHDGGEVQEVE 66

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVF-------HWGRFRISPSACWCGRVINALGKP 112
            +V+  N   +++ P+   E I  G  V+       +    ++       GRV++   KP
Sbjct: 67  SEVVGFNGQRLFLMPLEEVEGIVPGARVYARITANGNSASKQLPLGPELLGRVLDGSAKP 126

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +   G     +M+     + R  +E+    G+R I+    +  GQR+G+FAGSG+
Sbjct: 127 LDGLPAPETG-YRAPLMTPPVNPLQRTAIEQVLDVGVRTINALLTVGRGQRMGLFAGSGV 185

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A +D SP+LR
Sbjct: 186 GKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLLR 245

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 246 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 305

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LAE G YP +
Sbjct: 306 ALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLAESGNYPAI 365

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR        +    V     L+  ++  RD+  +G Y  G D +LD+A+   P
Sbjct: 366 DIEASISRAMTSLIDDNHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDPLLDRAILLYP 425

Query: 412 IIYDFLKQSPSDLSS-EDVFQEITKKL 437
            +  FL+Q   + S  ED  + +   L
Sbjct: 426 QMETFLQQGMFERSDYEDACKHLNALL 452


>gi|269118842|ref|YP_003307019.1| ATP synthase F1 subunit beta [Sebaldella termitidis ATCC 33386]
 gi|268612720|gb|ACZ07088.1| ATP synthase F1, beta subunit [Sebaldella termitidis ATCC 33386]
          Length = 465

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G +  I           +   + + ++ +       + +V + +  ++V    +   + +
Sbjct: 5   GTLLQIIGPVIDARFEEKLPAIYNALIIKFEDGRQLVAEVQQHLGNNVVRAVAMDGTDGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   ++       GR+ N LG+ +D      K +    I  + P    +  
Sbjct: 65  KRGLEVIDTGNPIKVPVGRETLGRIFNVLGEVVD-KGPAVKTEEYHSIHREAPSFEEQGT 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 GTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE R+   +      + K+ ++    +E P  R    LTA+T+AEYF  +   +VLL 
Sbjct: 184 RTREGRDLYNEMKESGVIDKTALIYGQMNEPPGARLRVGLTALTMAEYFRDREGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRMPSAVGYQPNLATEMGTLQERI--TSTKKGSITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  S LD   VL+RS++  G YP VDPL S SR+ +      +      
Sbjct: 302 PADDFTDPAPATTFSHLDATTVLSRSISSLGIYPAVDPLESTSRILEPEIVGVEHYNTAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  L+ R++E +DI  I G     D      V++   I  F  Q 
Sbjct: 362 EVQRLLQRYKELQDIIAILGMDELSDED-KLTVNRARKIQRFFSQP 406


>gi|224830508|gb|ACN66349.1| ATP synthase beta chain [Cissampelos grandifolia]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D LGQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARXIERFLSQP 428


>gi|219552182|gb|ACL26806.1| ATP synthase beta chain [Glochidion lanceolatum]
 gi|219552186|gb|ACL26808.1| ATP synthase beta chain [Glochidion zeylanicum]
          Length = 423

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRITSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|171316792|ref|ZP_02906003.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171098050|gb|EDT42866.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 386

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 151/380 (39%), Positives = 223/380 (58%), Gaps = 8/380 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +VI     +  + P    + +S    V   GR   +       GRV+++LG PIDG   
Sbjct: 5   AEVIGFTRHVALLSPFARVDRVSRTTRVVALGRPLSVPVGRMLLGRVVDSLGWPIDGGAP 64

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +  GDL   + ++ P  M R  +     TG+R +D    L  GQR+G+FA +G+GKSTLL
Sbjct: 65  VQAGDLR-SVFAEPPAPMRRCPIAVPLATGVRAVDAMLTLAEGQRMGIFAPAGVGKSTLL 123

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D  +I+L+GERGREVREF+E  LG + + +SVVV ATSD S I R  A   
Sbjct: 124 GMLARGAHCDVNVIALIGERGREVREFVETILGREGMARSVVVCATSDRSAIERAKAAYV 183

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G  VLL++DS+TRFA ++RE+   +GE PV RG+P SVF+ELPRLLER 
Sbjct: 184 ATAIAESFRDEGQRVLLMMDSLTRFARALREVGLAAGESPVRRGFPPSVFAELPRLLERA 243

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G  E  +G+ITA+ +VL + D   DP+++ VR I+DGH+VL+R++A + +YP +D L S+
Sbjct: 244 GMGE--RGSITALYTVLEEDDAGGDPVSEEVRGIVDGHMVLSRAIAAKNQYPAIDVLGSL 301

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  +    D  +    +  L+ ++ E   +  IG Y+ G + I D+A+ ++ +I  FL
Sbjct: 302 SRVMSQVVPPDHVEAAGRVRRLLAQYGEIEALLQIGEYQGGTNAIADEAIAKIDVIRAFL 361

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q      + + F+E    L
Sbjct: 362 SQRAG---TYEGFEETRDAL 378


>gi|155029315|dbj|BAF75541.1| ATP synthase beta subunit [Plukenetia polyadenia]
          Length = 489

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDAGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21684897|emb|CAD11575.1| ATP synthase beta subunit [Joinvillea gaudichaudiana]
          Length = 491

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 114/423 (26%), Positives = 182/423 (43%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I  I      VT     +       VV   K+ D  G+ I +  ++        V 
Sbjct: 13  STGXIDQIIGPVLDVTFPQGKLPYIYNALVV---KSRDTAGKQINVTCEVQQLLGNNRVR 69

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 70  AVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHR 128

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 129 SAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 188

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+
Sbjct: 189 GVSVFGGVGERTREGNDLYKEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTAL 248

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 249 TMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 307

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 308 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 366

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 367 TMLQPRIVGEEHYEXAQRVKQTLXRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 425

Query: 418 KQS 420
            Q 
Sbjct: 426 SQP 428


>gi|7708199|emb|CAB90041.1| ATP synthase beta subunit [Corokia cotoneaster]
          Length = 459

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 28  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQMVKQTLQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|323715506|gb|ADY04821.1| ATP synthase beta subunit [Mentzelia dispersa]
          Length = 487

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|323715436|gb|ADY04786.1| ATP synthase beta subunit [Camptotheca acuminata]
          Length = 468

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 325 DATXVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|251791748|ref|YP_003006469.1| F0F1 ATP synthase subunit beta [Dickeya zeae Ech1591]
 gi|247540369|gb|ACT08990.1| ATP synthase F1, beta subunit [Dickeya zeae Ech1591]
          Length = 460

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 107/408 (26%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPNVYDALEVENGAEKLVLEVQQQLGGGLVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLKVTNLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|207744812|ref|YP_002261204.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609]
 gi|206596222|emb|CAQ63149.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609]
          Length = 439

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+PID    +   +
Sbjct: 55  LGDGVVRTIALGSSDGLRRGMRVANTGAPISVPVGHGTLGRIMDVLGRPIDEAGPIACEE 114

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 115 KRG-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 173

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 174 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 233

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 234 TMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI-- 291

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 292 TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSR 351

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +   + R++E RDI  I G           +V +   I  FL 
Sbjct: 352 QLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILGMDELS-PEDKLSVGRARKIQRFLS 410

Query: 419 QS 420
           Q 
Sbjct: 411 QP 412


>gi|14718007|gb|AAK72745.1| ATP synthase beta subunit [Clarkia xantiana]
          Length = 458

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGDEHYETAQRVKETLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|32815657|gb|AAP88225.1| ATP synthase beta subunit [Annamocarya sinensis]
          Length = 457

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTTGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGVSLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|32815643|gb|AAP88218.1| ATP synthase beta subunit [Comptonia peregrina]
          Length = 449

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 16  KGRNTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGASLSVPVGGATLGR 75

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 76  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 134

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 135 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 194

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 195 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 255 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 312

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 313 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 372

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 373 ILGLDELSEED-RLTVARARKIERFLSQP 400


>gi|158602257|gb|ABW74595.1| ATP synthase beta subunit [Caltha palustris]
          Length = 485

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V QG+  D +GQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVSFPPGKMPNIYNALVVQGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|123325589|gb|ABM74419.1| ATP synthase beta subunit [Choisya ternata]
          Length = 466

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|113910814|gb|ABI48139.1| ATPase beta subunit [Cololejeunea biddlecomiae]
          Length = 471

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 35  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGAPLSVPVGEATLGRIFNVLG 94

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 95  EPVDNLGPV-EASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 153

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 154 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESKVINEENIPDSKVAL 213

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 214 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 273

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 274 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 331

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 332 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 391

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 392 LSEED-RLTVARARKIERFLSQP 413


>gi|7708574|emb|CAB90096.1| ATP synthase beta subunit [Rhamnus cathartica]
          Length = 488

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQQINVTCEVQQLLGNNRVRAV 70

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 71  AMSATDGLMRGMEVVDTGAPLSVPVGGTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 130 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 189

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 190 SVFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTM 249

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 250 AEYFRDVNEQDVLLFIDNIFRXVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 308 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 367

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 368 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 426

Query: 420 S 420
            
Sbjct: 427 P 427


>gi|292492384|ref|YP_003527823.1| ATPase, FliI/YscN family [Nitrosococcus halophilus Nc4]
 gi|291580979|gb|ADE15436.1| ATPase, FliI/YscN family [Nitrosococcus halophilus Nc4]
          Length = 480

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 154/441 (34%), Positives = 243/441 (55%), Gaps = 8/441 (1%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG 60
           Q   E   +L +D +  L V+G  I  +     T+  +   + +G    + +        
Sbjct: 17  QTLAECRERLLQDEAPLLRVEGRLIRMVG---LTLEAVGCQLPVGGRCHILRPGKPPVEA 73

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119
           +V+    + +++ P G    +     V        ++  A   GRV++  G+P+DG   L
Sbjct: 74  EVVGFAGERLFLMPTGDPRGLVPNAPVIPLPHGGGVAVGAGLLGRVLDGGGRPLDGLGPL 133

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +    + +  +    + RQ + +    G+  I+    +  GQR+G+FAGSG+GKS LL 
Sbjct: 134 -RTPHHVSLDGQPINPLARQPIREPLDVGVAAINGLITIGRGQRMGLFAGSGVGKSILLG 192

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D +++ L+GERGREV+EFIE  LG + L +SVVV   +D SP++R    + A
Sbjct: 193 MMTRYAKADVIVVGLIGERGREVQEFIESTLGPEGLARSVVVATPADHSPLMRLHGAMLA 252

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  +G  VLL++DS+TRFAH+ RE+A   GE P  RGYP SVF+++P+L+ER G
Sbjct: 253 TSIAEYFRDQGRQVLLLMDSLTRFAHAQRELALAIGEPPATRGYPPSVFAKVPQLVERAG 312

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA  +VL +GD+ NDP+AD+ R+ILDGHIVL+R LAE G YP +D  ASVS
Sbjct: 313 NGRSGSGSITAFYTVLTEGDDANDPVADAARAILDGHIVLSRRLAEAGHYPAIDIEASVS 372

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+  +  + + ++       +   +++ RD+  +G YR G D  LD+A+ + P    FL+
Sbjct: 373 RVMSQITTPEHRQAAQQFKQIYSLYQQNRDLISVGAYRRGGDPRLDEAIDRQPRFQTFLQ 432

Query: 419 QSPSDLSSED-VFQEITKKLQ 438
           Q      S D   + + + L+
Sbjct: 433 QGMFQSFSIDQSLKGLQQALR 453


>gi|289423325|ref|ZP_06425133.1| ATP synthase F1, beta subunit [Peptostreptococcus anaerobius 653-L]
 gi|289156256|gb|EFD04913.1| ATP synthase F1, beta subunit [Peptostreptococcus anaerobius 653-L]
          Length = 465

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 184/410 (44%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
              G I  +      V          L + +  +      + +V   +  D V    +  
Sbjct: 2   ANVGKIVQVLGAVLDVRFEDSKNLPNLLNALKIELNGKTIVAEVAQHVGNDTVRCIAMSA 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG+ ID  D+    ++S  I    P   
Sbjct: 62  TDGLVRGMDVIDTGAPISVPVGTGTLGRVFNVLGEAIDQKDAPTDVEVS-PIHKPAPKYD 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
             +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + S
Sbjct: 121 ELETKAEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFS 180

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    LT +T+AEYF  +   +
Sbjct: 181 GVGERTREGNDLYGEMTESGVIKKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDQAGQD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V 
Sbjct: 241 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  S LD   VL+R ++  G YP VDPL S SR+ D      +  
Sbjct: 299 AVYVPADDLTDPAPATTFSHLDAKTVLSRQISSLGIYPAVDPLESTSRVLDPNIVGQEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 EVARGVQSILQRYKELQDIIAILGMDELSEED-KVTVARARKIQRFLSQP 407


>gi|269104944|ref|ZP_06157640.1| ATP synthase alpha chain [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268161584|gb|EEZ40081.1| ATP synthase alpha chain [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 493

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 97/424 (22%), Positives = 177/424 (41%), Gaps = 25/424 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
               G I S++    T+  L+  V  G+ +       +     + +    V    +G   
Sbjct: 5   ARNEGTIVSVSDGIITINGLAD-VMQGEMIELP---DNRFALALNLERHSVGAVVMGPYA 60

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
           +++ G  V   GR   +       GRV+N LG+PIDG   L + D    +    P  ++R
Sbjct: 61  DLAEGMKVKGTGRILEVPVGKGLLGRVVNTLGQPIDGKGPL-EHDGFSPVEVIAPGVIDR 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVG 196
           + V++  +TG + +D   P+  GQR  +      GK+ +      +  D     I   +G
Sbjct: 120 KSVDQPIQTGYKAVDSMVPIGRGQRELIIGDRQTGKTAMAIDAIINQRDTGIYSIYVAIG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   +   +     +   + ++VVVA++ E+  L+ +AP +   + EYF  +G++ L+I
Sbjct: 180 QKASTIANVVRKLEENGALQNTIVVVASASEAAALQYLAPYSGCAMGEYFRDRGEDALII 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------K 302
            D +++ A + R+I+      P    +P  VF    RLLER                   
Sbjct: 240 YDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHSRLLERAARVNSDYVERFTKGEVKG 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G++TA+  +     + +  +  +V SI DG I L   L   G  P VDP  SVSR+  
Sbjct: 300 QTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTHLFNAGLRPAVDPGISVSRVGG 359

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            A +   KKL   +   + ++ E   +     +   +D    K +     + + +KQ   
Sbjct: 360 AAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSDLDDATRKQLDHGEKVTELMKQKQY 416

Query: 423 DLSS 426
              S
Sbjct: 417 SPMS 420


>gi|158602263|gb|ABW74598.1| ATP synthase beta subunit [Clematis hexapetala]
          Length = 489

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|148787941|gb|ABR12220.1| ATP synthase beta subunit [Eichhornia crassipes]
          Length = 479

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GRVAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 415


>gi|110915664|gb|ABH02620.1| ATP synthase beta subunit [Lolium perenne]
 gi|110915666|gb|ABH02621.1| ATP synthase beta subunit [Lolium rigidum]
          Length = 472

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 30  NKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLG 89

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 90  EPVDNLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 148

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 149 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVAL 208

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 209 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 269 AVGYQPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 327 SRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDE 386

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 387 LSEED-RLTVARARKIERFLSQP 408


>gi|114216030|gb|ABI54626.1| ATPase alpha subunit [Chlorokybus atmophyticus]
          Length = 357

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 19/362 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V     +S   G  + +  D V +   G    I  GD+V   G   
Sbjct: 1   RVYGLNK-IQAGEMVEF---SSGVKGMALNLENDNVGVVLFGSDTGIKEGDIVKRTGSIV 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ALG PIDG   L     S  +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPVGKGMLGRVVDALGNPIDGKGRLTDVSRSR-VEVKAPGIIARKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KVIISLVGERGREVR 203
              P+  GQR  +      GK+ +      +                +   VG++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKEVNSGTDSTKKLYCVYVAVGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++        + S++V AT+ +   L+ +AP     + EYF     + L+I D +++ 
Sbjct: 176 QLVKTLSEKGALEYSIIVAATASDPAPLQFLAPYAGCAMGEYFRDNKMHSLIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNH 320
           + + R+++      P    +P  VF    RLLER      +KG  ++TA+  +     + 
Sbjct: 236 SVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDQKGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   +
Sbjct: 296 SAYIPTNVISITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVSGSLKLEL 355

Query: 381 HR 382
            +
Sbjct: 356 AQ 357


>gi|12045263|ref|NP_073074.1| F0F1 ATP synthase subunit alpha [Mycoplasma genitalium G37]
 gi|255660086|ref|ZP_05405495.1| F0F1 ATP synthase subunit alpha [Mycoplasma genitalium G37]
 gi|1352027|sp|P47641|ATPA_MYCGE RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|3844993|gb|AAC71629.1| ATP synthase F1, alpha subunit [Mycoplasma genitalium G37]
 gi|166078840|gb|ABY79458.1| ATP synthase F1, alpha subunit [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 518

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 101/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + + +  +    + YSK     + G + S+      V+ L +   L + +  +    +  
Sbjct: 5   LNEYVALIKTEIKKYSKKIFNSEIGQVISVADGIAKVSGL-ENALLNELIQFEN---NIQ 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V+ +  + V I   G    +  G          +        GR++NALG+ IDG   
Sbjct: 61  GIVLNLEQNTVGIALFGDYSSLREGSTAKRTHSVMKTPVGDVMLGRIVNALGEAIDGRGD 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +   +I    P  M R+ V +  +TGI  ID   P+  GQR  +      GK+ + 
Sbjct: 121 IKATEYD-QIEKIAPGVMKRKSVNQPLETGILTIDALFPIGKGQRELIVGDRQTGKTAIA 179

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
             ++  + D     +   +G++   V + +      D++K + VV AT+ +S  +  ++P
Sbjct: 180 IDTIINQKDKDVYCVYVAIGQKNSSVAQIVHQLEVNDSMKYTTVVCATASDSDSMVYLSP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T +TIAEY+  KG +VL++ D +++ A + R ++      P    +P  VF    RLLE
Sbjct: 240 FTGITIAEYWLKKGKDVLIVFDDLSKHAVAYRTLSLLLKRPPGREAFPGDVFYLHSRLLE 299

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G+ITA+  +     + +  I  +V SI DG + +  SL   G+ P +  
Sbjct: 300 RACKLNDENGGGSITALPIIETQAGDISAYIPTNVISITDGQLFMVSSLFNAGQRPAIQI 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A +   K+   SL   + ++ E         +   +D    K +     +
Sbjct: 360 GLSVSRVGSAAQTKAIKQQTGSLKLELAQYSELD---SFSQFGSDLDENTKKVLEHGKRV 416

Query: 414 YDFLKQSPSDLSSE 427
            + +KQ      S+
Sbjct: 417 MEMIKQPNGKPYSQ 430


>gi|83941355|ref|ZP_00953817.1| ATP synthase subunit B [Sulfitobacter sp. EE-36]
 gi|83847175|gb|EAP85050.1| ATP synthase subunit B [Sulfitobacter sp. EE-36]
          Length = 474

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 187/422 (44%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V        + + VV +      + +V   +  + V    +  
Sbjct: 1   MANAVGKITQVIGAVVDVQFEDHLPEILNAVVTENHGKKLILEVAQHLGENTVRTIAMDA 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    I       GR++N +G+ ID    +   +    I +  P   
Sbjct: 61  TEGLVRGQRVEDTGAPISIPVGNATLGRIMNVVGEAIDEKGDIQSAE-RRSIHADAPEFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 EQSTTSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +  N          +  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMIESNVINPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + 
Sbjct: 240 RDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKS 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D  
Sbjct: 298 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPS 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 358 IVGEEHYNVARDVQGILQRYKSLQDIIAILGMDELSEDD-KLTVARARKIERFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|256061823|ref|ZP_05451958.1| F0F1 ATP synthase subunit beta [Brucella neotomae 5K33]
 gi|261325827|ref|ZP_05965024.1| ATP synthase subunit beta [Brucella neotomae 5K33]
 gi|261301807|gb|EEY05304.1| ATP synthase subunit beta [Brucella neotomae 5K33]
          Length = 521

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 185/411 (45%), Gaps = 19/411 (4%)

Query: 25  YISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           +I+ +      V     Q   + + +    ++   + +V   +  D V    +   E + 
Sbjct: 54  HITQVIGAVVDVKFPEGQLPLILNALEVDNQSHRLVLEVAQHLGEDTVRTIAMDATEGLV 113

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR++N +G+P+D    + K   +  I    P  + +   
Sbjct: 114 RGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTE 172

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 173 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 233 TREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 293 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      + 
Sbjct: 351 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEH 410

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 411 YAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 460


>gi|158602259|gb|ABW74596.1| ATP synthase beta subunit [Ceratocephala pungens]
          Length = 497

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V + G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 78  MSATEGLMRGMEVINTGAPLSVPVGGATLGRIFNFLGEPVDNLGPVXTGTTS-PIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEENLGESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|8452663|emb|CAB90091.2| ATP synthase beta subunit [Loeseneriella barbata]
          Length = 484

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G ++ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRVAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 XGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +D+  I G     +      V +   I  FL Q 
Sbjct: 366 RIVGEEHYETAQRVKQTLQRYKELQDLIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|62085221|gb|AAX63013.1| ATP synthase beta subunit [Elaeodendron orientale]
          Length = 486

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 10  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 70  ATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 129 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 189 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|62085131|gb|AAX62971.1| ATP synthase beta subunit [Euphronia guianensis]
          Length = 497

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVTFPRGKMPNIYNALVVKG--RDAAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGEPVDELGPVD-SRTTYPIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLATKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESRVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G LP A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     K    +  ++ R++E +D+  I G            V +   +  FL Q 
Sbjct: 376 QPDIVGKKHYKTAQRVKQILQRYKELQDVISILGMDELSQED-RLTVARARKVERFLSQP 434


>gi|17986535|ref|NP_539169.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M]
 gi|23502652|ref|NP_698779.1| F0F1 ATP synthase subunit beta [Brucella suis 1330]
 gi|148559326|ref|YP_001259638.1| F0F1 ATP synthase subunit beta [Brucella ovis ATCC 25840]
 gi|161619719|ref|YP_001593606.1| F0F1 ATP synthase subunit beta [Brucella canis ATCC 23365]
 gi|163845375|ref|YP_001623030.1| F0F1 ATP synthase subunit beta [Brucella suis ATCC 23445]
 gi|225628353|ref|ZP_03786387.1| ATP synthase F1, beta subunit [Brucella ceti str. Cudo]
 gi|225853243|ref|YP_002733476.1| F0F1 ATP synthase subunit beta [Brucella melitensis ATCC 23457]
 gi|254700443|ref|ZP_05162271.1| F0F1 ATP synthase subunit beta [Brucella suis bv. 5 str. 513]
 gi|254703564|ref|ZP_05165392.1| F0F1 ATP synthase subunit beta [Brucella suis bv. 3 str. 686]
 gi|254708349|ref|ZP_05170177.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis M163/99/10]
 gi|254714641|ref|ZP_05176452.1| F0F1 ATP synthase subunit beta [Brucella ceti M644/93/1]
 gi|254717539|ref|ZP_05179350.1| F0F1 ATP synthase subunit beta [Brucella ceti M13/05/1]
 gi|256045395|ref|ZP_05448289.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256114363|ref|ZP_05455096.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 3 str.
           Ether]
 gi|256160496|ref|ZP_05458185.1| F0F1 ATP synthase subunit beta [Brucella ceti M490/95/1]
 gi|256255702|ref|ZP_05461238.1| F0F1 ATP synthase subunit beta [Brucella ceti B1/94]
 gi|256263269|ref|ZP_05465801.1| ATP synthase subunit beta [Brucella melitensis bv. 2 str. 63/9]
 gi|260167999|ref|ZP_05754810.1| F0F1 ATP synthase subunit beta [Brucella sp. F5/99]
 gi|260565713|ref|ZP_05836196.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M]
 gi|260568870|ref|ZP_05839338.1| ATP synthase subunit beta [Brucella suis bv. 4 str. 40]
 gi|261219373|ref|ZP_05933654.1| ATP synthase subunit beta [Brucella ceti M13/05/1]
 gi|261222913|ref|ZP_05937194.1| ATP synthase subunit beta [Brucella ceti B1/94]
 gi|261315848|ref|ZP_05955045.1| ATP synthase subunit beta [Brucella pinnipedialis M163/99/10]
 gi|261322435|ref|ZP_05961632.1| ATP synthase subunit beta [Brucella ceti M644/93/1]
 gi|261750944|ref|ZP_05994653.1| ATP synthase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261754198|ref|ZP_05997907.1| ATP synthase subunit beta [Brucella suis bv. 3 str. 686]
 gi|261757444|ref|ZP_06001153.1| ATP synthase subunit beta [Brucella sp. F5/99]
 gi|265991824|ref|ZP_06104381.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995663|ref|ZP_06108220.1| ATP synthase subunit beta [Brucella melitensis bv. 3 str. Ether]
 gi|265998872|ref|ZP_06111429.1| ATP synthase subunit beta [Brucella ceti M490/95/1]
 gi|294851037|ref|ZP_06791713.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
 gi|306844779|ref|ZP_07477364.1| ATP synthase F1, beta subunit [Brucella sp. BO1]
 gi|81752067|sp|Q8FYR5|ATPB_BRUSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81852461|sp|Q8YJ35|ATPB_BRUME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358262|sp|A9M837|ATPB_BRUC2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358263|sp|A5VSE1|ATPB_BRUO2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358264|sp|A9WWS2|ATPB_BRUSI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|17982141|gb|AAL51433.1| ATP synthase beta chain [Brucella melitensis bv. 1 str. 16M]
 gi|23348660|gb|AAN30694.1| ATP synthase F1, beta subunit [Brucella suis 1330]
 gi|148370583|gb|ABQ60562.1| ATP synthase F1, beta subunit [Brucella ovis ATCC 25840]
 gi|161336530|gb|ABX62835.1| ATP synthase F1, beta subunit [Brucella canis ATCC 23365]
 gi|163676098|gb|ABY40208.1| ATP synthase F1, beta subunit [Brucella suis ATCC 23445]
 gi|225616199|gb|EEH13247.1| ATP synthase F1, beta subunit [Brucella ceti str. Cudo]
 gi|225641608|gb|ACO01522.1| ATP synthase F1, beta subunit [Brucella melitensis ATCC 23457]
 gi|260151086|gb|EEW86181.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M]
 gi|260154254|gb|EEW89336.1| ATP synthase subunit beta [Brucella suis bv. 4 str. 40]
 gi|260921497|gb|EEX88150.1| ATP synthase subunit beta [Brucella ceti B1/94]
 gi|260924462|gb|EEX91030.1| ATP synthase subunit beta [Brucella ceti M13/05/1]
 gi|261295125|gb|EEX98621.1| ATP synthase subunit beta [Brucella ceti M644/93/1]
 gi|261304874|gb|EEY08371.1| ATP synthase subunit beta [Brucella pinnipedialis M163/99/10]
 gi|261737428|gb|EEY25424.1| ATP synthase subunit beta [Brucella sp. F5/99]
 gi|261740697|gb|EEY28623.1| ATP synthase subunit beta [Brucella suis bv. 5 str. 513]
 gi|261743951|gb|EEY31877.1| ATP synthase subunit beta [Brucella suis bv. 3 str. 686]
 gi|262553561|gb|EEZ09330.1| ATP synthase subunit beta [Brucella ceti M490/95/1]
 gi|262766947|gb|EEZ12565.1| ATP synthase subunit beta [Brucella melitensis bv. 3 str. Ether]
 gi|263002780|gb|EEZ15183.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093233|gb|EEZ17330.1| ATP synthase subunit beta [Brucella melitensis bv. 2 str. 63/9]
 gi|294821680|gb|EFG38676.1| ATP synthase F1 [Brucella sp. NVSL 07-0026]
 gi|306274951|gb|EFM56721.1| ATP synthase F1, beta subunit [Brucella sp. BO1]
 gi|326409802|gb|ADZ66867.1| F0F1 ATP synthase subunit beta [Brucella melitensis M28]
 gi|326539519|gb|ADZ87734.1| ATP synthase F1, beta subunit [Brucella melitensis M5-90]
          Length = 521

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 184/411 (44%), Gaps = 19/411 (4%)

Query: 25  YISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           +I+ +      V     Q   + + +    +    + +V   +  D V    +   E + 
Sbjct: 54  HITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLV 113

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR++N +G+P+D    + K   +  I    P  + +   
Sbjct: 114 RGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTE 172

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 173 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 233 TREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 293 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      + 
Sbjct: 351 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEH 410

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 411 YAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 460


>gi|260431754|ref|ZP_05785725.1| flagellum-specific ATP synthase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415582|gb|EEX08841.1| flagellum-specific ATP synthase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 445

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 156/414 (37%), Positives = 246/414 (59%), Gaps = 3/414 (0%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVI 63
           L+ L   +E    + V Q G +S +      +  L+    +GD   + + +  D  G+V+
Sbjct: 4   LDPLILKSEFDRLSPVRQMGVVSGVARGMIEIDGLATVARIGDHLTLRRPQGPDLAGEVL 63

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
            +  D+V++ P    + + LGD V+       +P   W GRV++  G P+DG   L  G 
Sbjct: 64  NVESDVVHMLPSAAPDGVRLGDRVYLEPTPAFAPGMHWLGRVVDPFGTPLDGK-PLLPGM 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              ++++  P A++R+ + +   TG+ +++   P+  GQR+G+FAGSG+GKSTLL+  A+
Sbjct: 123 HERDVLAAPPRAVDRKPLGERMATGLAIMNTVLPIVRGQRVGLFAGSGVGKSTLLATLAK 182

Query: 184 SDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           S   D V+++L+GERGREV EF+E+    + LK+S+VV ATSD+S + R+    +A+T A
Sbjct: 183 SMEADAVVVALIGERGREVNEFVENALGREGLKRSIVVAATSDQSALARRRCAWSAMTAA 242

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EY   +G +VL + DS+TRFA + REIA   GE P  RG+P SV   +  L ER GP  +
Sbjct: 243 EYLRDQGLSVLFLADSVTRFAEAHREIAVAMGESPSLRGFPPSVTPMIAGLCERAGPGTE 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+ITAV SVLV G + ++PIAD +R +LDGHIVL+R +AE GR+P +D   SVSR   
Sbjct: 303 NQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLSREIAERGRFPAIDVSRSVSRSLP 362

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            A + +E +L++    L+  +E++  +   G Y PG D +LD+A+     +  F
Sbjct: 363 DAATPEENQLIAETRRLVGSYEQSEVMIKAGLYTPGTDPLLDQAMRVHDELDGF 416


>gi|170178338|gb|ACB10588.1| ATP synthase beta subunit [Cornus chinensis]
          Length = 453

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEDD-RLIVARARKIERFLSQP 395


>gi|111283617|gb|ABH09180.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 356

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/356 (24%), Positives = 151/356 (42%), Gaps = 19/356 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V   G      G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFAGG---VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 176

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREV 352


>gi|4206596|gb|AAD11729.1| ATP synthase beta subunit [Correa pulchella]
          Length = 476

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 182/422 (43%), Gaps = 31/422 (7%)

Query: 23  GGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYI 72
            G+I+ I      V      +       VV   K+ D  GQ I +  ++        V  
Sbjct: 5   SGHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTTGQPINVTCEVQQLLGNNRVRA 61

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I   
Sbjct: 62  VAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKS 120

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 121 APAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 180

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 181 VSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALT 240

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 241 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 298

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 299 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 358

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 359 MLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLS 417

Query: 419 QS 420
           Q 
Sbjct: 418 QP 419


>gi|5001583|gb|AAD37038.1|AF092112_1 ATP synthase beta subunit [Cercidiphyllum japonicum]
          Length = 480

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGDPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIXRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|11497535|ref|NP_054943.1| ATP synthase CF1 beta subunit [Spinacia oleracea]
 gi|1703723|sp|P00825|ATPB_SPIOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|733448|gb|AAB60294.1| CF1 ATP synthase beta subunit [Spinacia oleracea]
 gi|7636116|emb|CAB88736.1| ATP synthase beta subunit [Spinacia oleracea]
 gi|33327771|gb|AAQ09249.1| ATP synthase beta subunit [Spinacia oleracea]
          Length = 498

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D  GQ + +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTAGQPMNVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|295136904|ref|YP_003587736.1| ATP synthase CF1 beta subunit [Lathyrus sativus]
 gi|293338626|gb|ADE43598.1| ATP synthase CF1 beta subunit [Lathyrus sativus]
          Length = 491

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ QG   D +GQ IR+  ++             
Sbjct: 21  GRITQIIGPVLDIVFPPGKMPYIYNALIVQG--RDTVGQQIRVTCEVQRLLGNNRARAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLKRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTQLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +D+  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDMISILGLDEVSEED-RLTVARARKMERFLSQP 434


>gi|315497308|ref|YP_004086112.1| ATP synthase f1, beta subunit [Asticcacaulis excentricus CB 48]
 gi|315415320|gb|ADU11961.1| ATP synthase F1, beta subunit [Asticcacaulis excentricus CB 48]
          Length = 481

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 107/416 (25%), Positives = 185/416 (44%), Gaps = 25/416 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-VIR----INLDIVYICPVGIG 78
           G IS +      V        +      +  N+ +  + V+     +  + V    +   
Sbjct: 12  GRISQVIGAVVDVEFDGNLPAI--LNALETTNTASGARLVLEVAQHLGENAVRTIAMDAT 69

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G    +       GR++N +G+PID    +     +  I +  P   +
Sbjct: 70  EGLVRGQEVTDLGAPITVPVGPATLGRIMNVIGEPIDEAGPIETTYFN-PIHADAPAFED 128

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +   TGI+VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 129 QATSAEILVTGIKVIDLICPYAKGGKIGLFGGAGVGKTVTIQELINNIAKAYGGYSVFAG 188

Query: 195 VGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +   + +        G    +  +V    +E P  R    LT +  AEYF 
Sbjct: 189 VGERTREGNDLYHEMIESKVNEHGGGGNSRCTLVYGQMNEPPGARARVALTGLAQAEYFR 248

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG
Sbjct: 249 DQEGKDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGKLQERI--TSTKKG 306

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V +V V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D   
Sbjct: 307 SITSVQAVYVPADDLTDPAPATSFAHLDATTVLSRSIAEQGIYPAVDPLDSTSRILDPRI 366

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ + +  ++ +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 367 VGEEHYQVATRVQEILQQYKALKDIIAILGMDELSEED-KLIVARARKIQRFLSQP 421


>gi|195134016|ref|XP_002011434.1| GI14045 [Drosophila mojavensis]
 gi|193912057|gb|EDW10924.1| GI14045 [Drosophila mojavensis]
          Length = 506

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 193/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +    ++   + +V   +  + V    +   E +
Sbjct: 38  NGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 97

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI   A   GR+IN +G+PID    +   D +  I ++ P  +    
Sbjct: 98  IRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVEMSV 156

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 157 EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 216

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 217 RTREGNDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 276

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 277 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITS 334

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 335 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQE 394

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 395 HYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAE 450

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 451 VFTGHAGKL 459


>gi|118918091|dbj|BAF40435.1| ATP synthase beta subunit [Euphronia guianensis]
          Length = 488

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTGGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRPAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYKEMKESRVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G LP A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     K    +  ++ R++E +D+  I G            V +   +  FL Q 
Sbjct: 367 QPDIVGKKHYKTAQRVKQILQRYKELQDVISILGMDELSQED-RLTVARARKVERFLSQP 425


>gi|61968251|gb|AAX57052.1| ATP synthase beta subunit [Hymenocardia acida]
          Length = 479

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|75336483|sp|Q9MRV8|ATPB_ARIMA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687956|emb|CAB89699.1| ATP synthase beta subunit [Aristolochia macrophylla]
 gi|33327739|gb|AAQ09233.1| ATP synthase beta subunit [Aristolochia macrophylla]
          Length = 498

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ + +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQVNVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7688023|emb|CAB89716.1| ATP synthase beta subunit [Liriodendron tulipifera]
          Length = 498

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62085229|gb|AAX63017.1| ATP synthase beta subunit [Paxistima canbyi]
          Length = 483

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|15828739|ref|NP_326099.1| F0F1 ATP synthase subunit alpha [Mycoplasma pulmonis UAB CTIP]
 gi|81620611|sp|Q98QU3|ATPA1_MYCPU RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|14089681|emb|CAC13441.1| ATP SYNTHASE ALPHA CHAIN [Mycoplasma pulmonis]
          Length = 528

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 191/445 (42%), Gaps = 21/445 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-----GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M    + ++ + ++  +N  ++      G + SI      V+ L + V  G+ ++    N
Sbjct: 1   MALKNKDISSIIKERIRNYKIEKINDEVGKVISIGDGIALVSGL-KNVKNGELIIF---N 56

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPID 114
               G  + + +D + +  +G    +  GD          I       GRVINALG+PID
Sbjct: 57  ESVYGLTLNLEIDYIGVAILGNDTLLKEGDEAKRTFEVISIKVGPEILGRVINALGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++  +I    P  M R+ V +   TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGEID-SEIHRQIFRVAPGVMARESVNEALSTGILAIDSMIPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +      +      K I   +G++   V + +           + VV A++ E   ++
Sbjct: 176 TAIAIDAIINQKGKNVKCIYVAIGQKNSTVAQIVRKLENHGAMEYTSVVSASASELSPMQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTIAE F   G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 236 YLAPYTGVTIAEEFMETGQDVLIVYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER     KE   G+ITA+  +     + +  IA +V SI DG I    SL   G+ P
Sbjct: 296 QLLERAAKVNKENGGGSITALPIIETQQGDISAYIATNVISITDGQIFTKESLFNSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A  +  K++ SSL   + ++ E   +     +   +D      +  
Sbjct: 356 AIDVGFSVSRVGSSAQISAMKEVTSSLKLQLAQYNE---MLAFSQFGSDLDDSTKAILEN 412

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEIT 434
              IY+ LKQ     S  D + ++ 
Sbjct: 413 GSKIYEILKQDQ--YSPIDQYTQVI 435


>gi|270313037|gb|ACZ73600.1| ATP synthase beta subunit [Harrisonia abyssinica]
          Length = 463

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/388 (27%), Positives = 171/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 25  GQDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 144 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        D  +    +   + R++E +DI  I
Sbjct: 322 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYKELQDIIAI 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKIERFLSQP 408


>gi|7688431|emb|CAB89731.1| ATP synthase beta subunit [Xeronema callistemon]
          Length = 486

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       GR
Sbjct: 44  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGR 103

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 104 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 162

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 163 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 222

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 223 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 282

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 283 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 340

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 341 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 400

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 401 ILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|1934688|gb|AAB51731.1| ATP synthase beta chain [Tmesipteris tannensis]
          Length = 443

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGQATLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +   D    I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPIN-ADKKSPIHEPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYTEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLSTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|4206594|gb|AAD11728.1| ATP synthase beta subunit [Zanthoxylum sp. Chase 1348]
          Length = 471

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 90  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 148

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 149 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYXEMKESGVINEQNIA 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 209 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 268

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 269 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 326

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 327 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 386

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 387 ILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|20269422|gb|AAM17938.1| ATP synthase beta subunit [Lissocarpa guianensis]
          Length = 435

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGXRMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|19920171|gb|AAM08603.1|AC092750_37 Putative atpB; ATPase beta subunit from chromosome 10 chloroplast
           insertion [Oryza sativa Japonica Group]
 gi|21327363|gb|AAM48268.1|AC122148_21 Putative atpB; ATPase beta subunit from chromosome 10 chloroplast
           insertion [Oryza sativa Japonica Group]
 gi|110288944|gb|ABB47307.2| ATP synthase beta chain, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 498

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 179/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVV----HQGKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT     +       VV      GK  +   +V ++  +  V    
Sbjct: 19  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVKSRDTDGKQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPTVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|239944299|ref|ZP_04696236.1| F0F1 ATP synthase subunit alpha [Streptomyces roseosporus NRRL
           15998]
 gi|239990753|ref|ZP_04711417.1| F0F1 ATP synthase subunit alpha [Streptomyces roseosporus NRRL
           11379]
 gi|291447766|ref|ZP_06587156.1| F0F1 ATP synthase subunit alpha [Streptomyces roseosporus NRRL
           15998]
 gi|291350713|gb|EFE77617.1| F0F1 ATP synthase subunit alpha [Streptomyces roseosporus NRRL
           15998]
          Length = 523

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 90/432 (20%), Positives = 166/432 (38%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALDNFVQSYQPDAASREEVGTVSVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  + P  M R+ V +  +TG + +D   P+  GQR  +      GK+ L     
Sbjct: 128 DSRRALELQAPGVMVRKSVHEPMQTGYKAVDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQYRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GKRMVELLKQPQ 436


>gi|114052072|ref|NP_001040450.1| H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori]
 gi|95102938|gb|ABF51410.1| H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori]
          Length = 516

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 195/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +  Q ++   + +V   +  + V    +   E + 
Sbjct: 50  GKVVAVIGAVVDVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 109

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   RI   A   GR+IN +G+PID    +   D +  I ++ P  ++    
Sbjct: 110 RGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQ 168

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 169 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 228

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 229 TREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 288

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 289 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 346

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      + 
Sbjct: 347 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 406

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 407 YNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEV 462

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 463 FTGHAGKL 470


>gi|20269448|gb|AAM17951.1| ATP synthase beta subunit [Sladenia celastrifolia]
          Length = 437

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 105/385 (27%), Positives = 171/385 (44%), Gaps = 26/385 (6%)

Query: 58  NLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINA 108
            LGQ I +  ++        V    +   + ++ G  V   G    +       GR+ N 
Sbjct: 1   TLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNV 60

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F 
Sbjct: 61  LGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFG 119

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKS 217
           G+G+GK+ L+     +       +S+ G   ER RE  +   +               K 
Sbjct: 120 GAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKV 179

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 180 ALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRM 239

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   
Sbjct: 240 PSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATT 297

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G 
Sbjct: 298 VLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGL 357

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
               +      V +   I  FL Q 
Sbjct: 358 DELSEED-RLTVARARKIERFLSQP 381


>gi|62085169|gb|AAX62989.1| ATP synthase beta subunit [Omphalea diandra]
          Length = 482

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-IRATSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLGTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 419


>gi|266620417|ref|ZP_06113352.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
 gi|288867994|gb|EFD00293.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479]
          Length = 468

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 114/423 (26%), Positives = 190/423 (44%), Gaps = 17/423 (4%)

Query: 24  GYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G I  +      V      +  C+ D +         + +V   +  + V    +   E 
Sbjct: 4   GKIVQVLGPVVDVEFEEGVELPCIKDALEVDNDGKRCVMEVSQHLGNNTVRCIMLASSEG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V   G   R+       GR+ N LG+ ID  + L +G+    I    P    + 
Sbjct: 64  LCRDMEVTATGSGIRVPVGEQTLGRLFNVLGETIDNGEPLKEGE-KWVIHRDPPSFEEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
            V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VG
Sbjct: 123 PVAEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVG 182

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  +   +      ++K+ +V    +E P  R     T +T+AEYF  +   NVLL
Sbjct: 183 ERSREGNDLWTEMGESGVIEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHKNVLL 242

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G++T+V +V 
Sbjct: 243 FIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGELQERI--TSTKNGSVTSVQAVY 300

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ 
Sbjct: 301 VPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEPDVVGEEHYEVA 360

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             +   + ++ E +DI  I G     D      V++   I  FL Q     S  + F  +
Sbjct: 361 RMVQETLQKYRELQDIIAILGMEELGDED-KTTVNRARKIQKFLSQP---FSVAENFTGV 416

Query: 434 TKK 436
             K
Sbjct: 417 AGK 419


>gi|219552226|gb|ACL26828.1| ATP synthase beta chain [Phyllanthus mangenotii]
          Length = 420

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 182/415 (43%), Gaps = 22/415 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN--SDNLGQVIRINLDI-VYICPVGIGE 79
           G I+ I      V     Q   + + +V +G++       +V ++  +  V    +   +
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQDTAGQLTCEVQQLLGNNLVRAVAMSATD 60

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +  
Sbjct: 61  GLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAPAFIQL 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG-- 196
                 F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  
Sbjct: 120 DTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGV 179

Query: 197 -ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF  
Sbjct: 180 GERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRD 239

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+
Sbjct: 240 VNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +      
Sbjct: 298 ITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 GEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|155029299|dbj|BAF75530.1| ATP synthase beta subunit [Droceloncia rigidifolia]
          Length = 489

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAIA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--IS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119350505|gb|ABL63203.1| AtpB [Haematococcus lacustris]
          Length = 392

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 169/368 (45%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + +  G  V   G+   +       GR+ N LG+P+D    +  G+ +
Sbjct: 2   DNAVRAVSMQQTDGLMRGMEVIDTGKPLSVPVGRDTLGRIFNVLGEPVDNLGPVNTGE-T 60

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I  + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 61  LPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 120

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   +               K  +V    +E P  R   
Sbjct: 121 AKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLPESKVALVYGQMNEPPGARMRV 180

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 181 ALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTL 240

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDP
Sbjct: 241 QERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDP 298

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +       +       ++   + R++E +DI  I G     +      V +   
Sbjct: 299 LESTSTMLQPWIVGEKHYSTAQNVKKTLQRYKELQDIIAILGLDELSEED-RLVVTRARK 357

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 358 IERFLSQP 365


>gi|113910810|gb|ABI48137.1| ATPase beta subunit [Porella pinnata]
          Length = 473

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 28/418 (6%)

Query: 26  ISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      V  L  +   + + +V QG+  ++ GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVAFLPGKMPNIYNSLVVQGQ-KNSAGQDINVTCEVQQLLGNNKVRAVAMS 59

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     ++ I    P  
Sbjct: 60  ATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTLPIHRSAPAF 118

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 119 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 178

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 179 GGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 238

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 239 FRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 296

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 297 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 356

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 WIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|56236580|gb|AAV84657.1| ATP synthase beta subunit [Agathis australis]
          Length = 410

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  VF  G    +       GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMKVFDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPV-AARAKS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRAAPDFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                  + S VGER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGCLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|21684905|emb|CAD11579.1| ATP synthase beta subunit [Rostkovia magellanica]
          Length = 498

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 178/418 (42%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQ----GKNSDNLGQVIRINLDI-VYICPVG 76
           G+I  I      V  L   +       VV      G N     +V ++  +  V    + 
Sbjct: 21  GHIVQIIGPVLDVVFLPGGLPNIYNALVVKDRDTVGPNIHVTCEVQQLLGNNRVRAVAMX 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 81  ATDGLXRGMEVIDTGAPLSVPVGGATLGRIFNVLGQPIDNLGPVDTS-TTFPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 140 IELNTELSIFQTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVF 199

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +  ++               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 AGVGERTREGNDLYKEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V+PL S S +   
Sbjct: 318 KGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAAKGIYPAVNPLDSTSTMLQS 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +D+  + G     +      V +   I  FL Q 
Sbjct: 378 NIVGKEHYETAQRVKQTSQRYKELQDVISVLGLDELSEED-RLIVARARKIERFLSQP 434


>gi|7708642|emb|CAB90008.1| ATP synthase beta subunit [Schima superba]
          Length = 482

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       G++ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGQIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|50604352|gb|AAT79518.1| ATP synthase [Nothofagus truncata]
 gi|50604354|gb|AAT79519.1| ATP synthase [Nothofagus fusca]
 gi|50604366|gb|AAT79525.1| ATP synthase [Nothofagus solandri]
          Length = 451

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 13  KGRDTVGQQIDVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 72

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 73  IFNVLGEPVDNLGPVDAS-TRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 131

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 132 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQNIA 191

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 192 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 251

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 252 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 309

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 310 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 369

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 370 ILGLDELSEED-RLTVARARKIERFLSQP 397


>gi|291389459|ref|XP_002711130.1| PREDICTED: mitochondrial ATP synthase beta subunit [Oryctolagus
           cuniculus]
          Length = 528

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           +  G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  LATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|118917330|dbj|BAF40449.1| ATP synthase beta subunit [Chondrostylis kunstleri]
          Length = 487

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVVGEPVDDLGPVD-TRATSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|8452730|emb|CAB89965.1| ATP synthase beta subunit [Pterostemon rotundifolius]
          Length = 490

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   B +GQ I +  ++        V    
Sbjct: 13  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGX--BTVGQKINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E I  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQEXI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|50604350|gb|AAT79517.1| ATP synthase [Nothofagus alessandri]
 gi|50604356|gb|AAT79520.1| ATP synthase [Nothofagus glauca]
 gi|50604358|gb|AAT79521.1| ATP synthase [Nothofagus gunnii]
 gi|50604362|gb|AAT79523.1| ATP synthase [Nothofagus moorei]
 gi|50604364|gb|AAT79524.1| ATP synthase [Nothofagus obliqua]
 gi|50604368|gb|AAT79526.1| ATP synthase [Nothofagus cunninghamii]
 gi|58294354|gb|AAW70093.1| ATP synthase CF1 beta chain [Nothofagus nitida]
          Length = 451

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 13  KGRDTVGQQIDVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 72

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 73  IFNVLGEPVDNLGPVDAS-TRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 131

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 132 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQNIA 191

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 192 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 251

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 252 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 309

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 310 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 369

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 370 ILGLDELSEED-RLTVARARKIERFLSQP 397


>gi|3850928|gb|AAC72156.1| ATP synthase beta subunit [Adenanthos obovatus]
          Length = 490

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNITESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +     D   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTXGHXDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|262374657|ref|ZP_06067930.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205]
 gi|262310447|gb|EEY91538.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205]
          Length = 464

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLNVTSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  S+ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARSVQNVLQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|183206528|gb|ACC54462.1| ATP synthase beta subunit [Legousia pentagonia]
          Length = 497

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 20  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDALGQPINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 78  MSATDGLMRGLEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYKEMKDSGVINEQKFGESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRVVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|124361816|gb|ABN09350.1| ATP synthase beta subunit [Halesia carolina]
          Length = 465

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGRDIGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 90  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 148

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 149 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 209 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 268

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 269 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 326

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 327 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 386

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 387 ILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|124361656|gb|ABN09270.1| ATP synthase beta subunit [Diospyros fasciculosa]
 gi|221078705|gb|ACL99427.1| ATP synthase beta subunit [Diospyros fasciculosa]
          Length = 465

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V + G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVINTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|124361806|gb|ABN09345.1| ATP synthase beta subunit [Manilkara zapota]
          Length = 465

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDKPINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 61  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 414


>gi|12005284|gb|AAG44369.1| ATP synthase beta subunit [Amborella trichopoda]
          Length = 491

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 116/439 (26%), Positives = 185/439 (42%), Gaps = 38/439 (8%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVI 63
             L+ LAE          G I+ I      V      +       VV   K  D  GQ I
Sbjct: 4   SGLSTLAE-------KSVGRIAQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTAGQQI 53

Query: 64  RINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
            +  ++        V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 54  NVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVD 113

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 114 NLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGGKIGLFGGAGVGK 172

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 173 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQ 232

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I+RF  +  E++   G +P A GY
Sbjct: 233 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGY 292

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 293 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 350

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 351 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGPDELSEE 410

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 411 D-RLTVARARKIERFLSQP 428


>gi|170178326|gb|ACB10582.1| ATP synthase beta subunit [Cornus racemosa]
          Length = 450

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|118918087|dbj|BAF40432.1| ATP synthase beta subunit [Dasylepis brevipedicellata]
          Length = 489

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDTTTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910780|gb|ABI48122.1| ATPase beta subunit [Lepidozia reptans]
          Length = 472

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 34  GQEIDVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 93

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 94  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 152

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K   
Sbjct: 153 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEQNISESKVAS 212

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 213 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 272

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 273 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 331 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 390

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 391 LSEED-RSTVARARKIERFLSQP 412


>gi|7708648|emb|CAB89998.1| ATP synthase beta subunit [Solanum americanum subsp. nodiflorum]
          Length = 479

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      +     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 10  GRVVXIIGPVLXIAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 68  MSATDGLTRGMEVIDKGAPISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINKENIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 423


>gi|158602289|gb|ABW74611.1| ATP synthase beta subunit [Ranunculus lyallii]
          Length = 483

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|157689150|gb|ABV65131.1| ATP synthase CF1 beta subunit [Bulnesia arborea]
          Length = 491

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      V     +   + + +V + +N   +GQ I +  ++        V    
Sbjct: 21  GHIVQIIGPVLDVAFPPGKMPKIYNALVVKAEN--TVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVDTSTTS-PIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINETNLSESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|110915660|gb|ABH02618.1| ATP synthase beta subunit [Leucopoa kingii]
          Length = 474

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 32  NKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLG 91

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 92  EPVDNLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 150

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 151 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVAL 210

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 211 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 270

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 271 AVGYQPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 328

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 329 SRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDE 388

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 389 LSEED-RLTVARARKIERFLSQP 410


>gi|12004159|gb|AAG43919.1|AF213788_1 ATP synthase beta subunit [Primula veitchiana]
          Length = 441

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTPGQPINVTCEVXQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|16943660|emb|CAD10755.1| ATP synthase, beta subunit [Campynema lineare]
          Length = 488

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITS-VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  IT  V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQITGPVLDVVFTPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708284|emb|CAB90069.1| ATP synthase beta subunit [Erythroxylum confusum]
          Length = 492

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E +  G  V   G    +       GR
Sbjct: 48  KGRDTGGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPVDELGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E   L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEXGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|99081926|ref|YP_614080.1| F0F1 ATP synthase subunit beta [Ruegeria sp. TM1040]
 gi|118573747|sp|Q1GEU8|ATPB_SILST RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|99038206|gb|ABF64818.1| ATP synthase F1 beta subunit [Ruegeria sp. TM1040]
          Length = 474

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V    +   + + +         + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVQFDGELPAILNALTTDNNGKKLVLEVAQHLGENSVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    I       GR++N +G+P+D  + +   + +  I    P   ++   
Sbjct: 66  RGQEVTDTGAPISIPVGNATLGRILNVVGEPVDEGEPIVAKE-TRAIHQPAPEFNDQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+ S +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYKVASDVQQILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|301761023|ref|XP_002916040.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281353277|gb|EFB28861.1| hypothetical protein PANDA_004098 [Ailuropoda melanoleuca]
          Length = 528

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|156598640|gb|ABU85576.1| ATP synthase CF1 beta subunit [Scaevola aemula]
          Length = 498

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 183/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K+ D  GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTAGQTINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+PID   ++     S  I    
Sbjct: 78  AMSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGTVDTSTTS-PIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  K    +   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 375 LQPRIVGEEHYKTAQEVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|7708335|emb|CAB89909.1| ATP synthase beta subunit [Humulus lupulus]
          Length = 489

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V  G   D +GQ I +  ++        V    
Sbjct: 19  GRIVQIIGPVLDVAFPPGKMPNIYNALVVXG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 432


>gi|18077603|emb|CAD11918.1| ATP synthase beta subunit [Polyosma cunninghamii]
          Length = 487

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVV---KDRDTVGQPISVTCEVQQLLGNNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 68  AMSATDGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 127 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 187 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 247 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 365 LQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|291165819|gb|EFE27867.1| ATP synthase F1, beta subunit [Filifactor alocis ATCC 35896]
          Length = 465

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 16/422 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      +   ++++  L + ++ +    + + +V   I  D+V    +   + +
Sbjct: 7   GKVVQIIGAVLDIRFDAEHLPSLKNAIIIKNGEKEVVVEVAQHIGEDMVRCIAMSSTDGL 66

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D +   G   +       GR+ N LG+PID    L +G+    I    P    +Q 
Sbjct: 67  VRGMDAIDTGGAISVPVGKNTLGRIFNLLGQPIDEAGDLEEGE-KWPIHRDPPAYEEQQT 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ ++     +         + + VGE
Sbjct: 126 NAEILETGIKVIDLICPYQKGGKIGLFGGAGVGKTVIIMELINNIAKQHGGLSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R    LT +T+AEYF  +   +VLL 
Sbjct: 186 RTREGNDLYYEMKESGVLDKTALVFGQMNEPPGARMRVGLTGLTMAEYFRDRAGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTQKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRQIASLGIYPAVDPLDSTSRILSPEVVGEEHYEVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +  ++ + ++ +DI  I G     +      V +   +  FL Q     S  + F  + 
Sbjct: 364 GVQSILQKMKDLQDIIAILGMDELSEED-KIIVSRARKVQRFLSQP---FSVAEQFTGMA 419

Query: 435 KK 436
            K
Sbjct: 420 GK 421


>gi|308800050|ref|XP_003074806.1| AtpB ATP synthase beta chain, mitochondrial precursor (IC)
           [Ostreococcus tauri]
 gi|119358798|emb|CAL52064.2| AtpB ATP synthase beta chain, mitochondrial precursor (IC)
           [Ostreococcus tauri]
          Length = 530

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 190/428 (44%), Gaps = 20/428 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINL 67
           + +A +YS    +  G ++ +      V        +   +  +G +   + +V   +  
Sbjct: 46  STIARNYSATNPIATGKVTQVIGAVVDVQFDDHLPSILSALEVEGHDVRLVLEVAQHLGE 105

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   E +  G  V + G   +I       GR++N +G+PID    +     S+
Sbjct: 106 NTVRTIAMDTTEGLVRGQPVQNMGSPIQIPVGRATLGRIMNVIGEPIDECGPISTT-TSL 164

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I  + PP +++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +  
Sbjct: 165 AIHREAPPFVDQSTEMQMLVTGIKVVDLLAPYQKGGKIGLFGGAGVGKTVFIMELINNIA 224

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMA 234
                  + + VGER RE  +   + +              K  +V    +E P  R   
Sbjct: 225 KGHGGFSVFAGVGERTREGNDLYHEMIEGGVIKLGDQASDSKCTLVYGQMNEPPGARARV 284

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ ++L  L
Sbjct: 285 GLTGLTVAEYFRDFEGQDVLFFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGL 344

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDP
Sbjct: 345 QERI--TTTTKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRSIAEIGIYPAVDP 402

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+    A   +       +  ++  ++  +DI  I G     +      V +   
Sbjct: 403 LDSTSRMLSPLALGDEHYNTARGVQKILQDYKNLQDIIAILGMDELSEDD-KLTVSRARK 461

Query: 413 IYDFLKQS 420
           +  FL Q 
Sbjct: 462 VQRFLSQP 469


>gi|62085227|gb|AAX63016.1| ATP synthase beta subunit [Gymnosporia senegalensis]
          Length = 483

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|270264094|ref|ZP_06192361.1| ATP synthase subunit beta [Serratia odorifera 4Rx13]
 gi|270041743|gb|EFA14840.1| ATP synthase subunit beta [Serratia odorifera 4Rx13]
          Length = 460

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 184/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  G +   L    ++   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVENGTDKLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P   +
Sbjct: 61  DGLRRGLKVIDLDHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEE-RWAIHRPAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               +   +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LANSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|253997694|ref|YP_003049758.1| ATP synthase F1 subunit beta [Methylotenera mobilis JLW8]
 gi|253984373|gb|ACT49231.1| ATP synthase F1, beta subunit [Methylotenera mobilis JLW8]
          Length = 475

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 169/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + ++ G      G + ++       GR+++ LG+PID    + + D
Sbjct: 54  LGDGIVRTIAMGSSDGLARGTAFKSTGAQIQVPVGTGTLGRIMDVLGRPIDEAGPI-ESD 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 ERRSIHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELIN 172

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 173 NIAKQHSGLSVFAGVGERTREGNDFYHEMAEAGVIKLDDMKESKVAMVFGQMNEPPGNRL 232

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              L+ +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ R
Sbjct: 233 RVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGR 292

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VD
Sbjct: 293 LQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVD 350

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      +  ++  S+   + R++E RDI  I G           AV +  
Sbjct: 351 PLDSTSRQLDPLVVGEEHYQVARSVQQTLQRYKELRDIIAILGMDELS-PEDKLAVGRAR 409

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 410 KIQRFLSQP 418


>gi|225554645|gb|EEH02941.1| ATP synthase subunit beta [Ajellomyces capsulatus G186AR]
 gi|240276989|gb|EER40499.1| mitochondrial ATP synthase [Ajellomyces capsulatus H143]
 gi|325094927|gb|EGC48237.1| mitochondrial ATP synthase [Ajellomyces capsulatus H88]
          Length = 522

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 182/431 (42%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
            Q G I  +      V      +   L       G     L     +  ++V    +   
Sbjct: 50  AQSGKIHQVIGAVVDVKFDGDQLPSILNALETTNGGQKLVLEVAQHLGENVVRTIAMDGT 109

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G    I       GR++N  G PID    + K      I ++ P  + 
Sbjct: 110 EGLVRGAAVTDTGAPIMIPVGPGTLGRIMNVTGDPIDERGPI-KHTKKAPIHAEAPEYVE 168

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   
Sbjct: 169 QATSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG 228

Query: 195 VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           VGER RE  +   +         D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 229 VGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDE 288

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +   KG+I
Sbjct: 289 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSI 346

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     
Sbjct: 347 TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVG 406

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   + + +  ++  ++  +DI  I G     +      V +   +  FL Q     + 
Sbjct: 407 EEHYNVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQP---FTV 462

Query: 427 EDVFQEITKKL 437
             VF  I  KL
Sbjct: 463 AQVFTGIEGKL 473


>gi|183206688|gb|ACC54542.1| ATP synthase beta subunit [Campanula parryi]
          Length = 484

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 14  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGTPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYKEMKDSGVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|197286889|ref|YP_002152761.1| F0F1 ATP synthase subunit beta [Proteus mirabilis HI4320]
 gi|227354878|ref|ZP_03839293.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
 gi|226740661|sp|B4F0E7|ATPB_PROMH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194684376|emb|CAR46024.1| ATP synthase beta chain [Proteus mirabilis HI4320]
 gi|227165031|gb|EEI49867.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906]
          Length = 460

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 183/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +             V        V  GK    L    ++   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDAEFPQDSVPKVYDALEVMNGKEKLVLEVQQQLGGGIVRCIAMGTS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V   G    +       GR++N LG PID    + + +    I  + P    
Sbjct: 61  DGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDMKGEI-ETEERWSIHREAPTYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|169832274|ref|YP_001718256.1| F0F1 ATP synthase subunit beta [Candidatus Desulforudis audaxviator
           MP104C]
 gi|226740188|sp|B1I6J7|ATPB_DESAP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169639118|gb|ACA60624.1| ATP synthase F1, beta subunit [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 472

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I  V   V     Q   + + +  +    D  G+   + L++        V    
Sbjct: 4   GEVVQIIGVVVDVRFPPGQVPEIYNALTIETDKVDAFGRKFNLTLEVAQHLGNNVVRTVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G   ++       GR+I+ LG PIDG   + K +    I    P
Sbjct: 64  MSTTDGLVRGAKVVDTGAPIKVPVGRPVLGRLIDVLGMPIDGLGDI-KAETYYPIHRPAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +++    +  +TG++VID+  P   G +IG+F G+G+GK+ ++     +         
Sbjct: 123 ALVDQSTKVEQLETGLKVIDLLVPFMKGGKIGMFGGAGVGKTVIVMELINNIAKQHGGIS 182

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  E + +     +  K+++V    +E P  R    LT + +AEYF  + 
Sbjct: 183 VFAGVGERTREGNELLLEMTEAGVLDKTMMVFGQMNEPPGCRLRVGLTGLCLAEYFRDEE 242

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VL+ +D+I RFA +  E++   G +P A GY  ++ +E+ +L ERI  +   KG+IT
Sbjct: 243 GADVLIFIDNIFRFAQAGTEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSIT 300

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL SVSR+ D      
Sbjct: 301 SVQAVYVPADDLTDPAPANTFAHLDGTVVLSRQIAELGIYPAVDPLDSVSRILDPNVVGQ 360

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +  ++ R++E +DI  I G     +      V +   +  +L Q 
Sbjct: 361 EHYQVARGVQKVLQRYKELQDIIAILGMEELSEED-KLIVARARKLQRYLSQP 412


>gi|5758855|gb|AAD50829.1| ATP synthase beta subunit [Aponogeton crispus]
          Length = 491

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|288554385|ref|YP_003426320.1| F0F1 ATP synthase subunit beta [Bacillus pseudofirmus OF4]
 gi|14916961|sp|P22478|ATPB_BACPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12061046|gb|AAG48363.1|AF330160_10 ATP synthase beta subunit [Bacillus pseudofirmus OF4]
 gi|288545545|gb|ADC49428.1| ATP synthase beta subunit [Bacillus pseudofirmus OF4]
          Length = 470

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +G  + +  G      G    +       GRV N LG+ ID  + + 
Sbjct: 51  ALHLGDDSVRTVAMGSTDGLVRGTEALDTGAPISVPVGEATLGRVFNVLGEAIDLGEPVA 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADVKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 SGLTMAEHFRDRDGQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   +   +   + +++E +DI  I G     +      VH+   I 
Sbjct: 349 STSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAILGMDELSEED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|293611147|ref|ZP_06693445.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826398|gb|EFF84765.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124141|gb|ADY83664.1| F0F1 ATP synthase subunit beta [Acinetobacter calcoaceticus PHEA-2]
          Length = 464

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/430 (25%), Positives = 188/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLNVTSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  ++ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARAVQNVLQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|194132105|gb|ACF33359.1| ATP synthase CF1 beta subunit [Gonystylus bancanus]
          Length = 498

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDRGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|8439268|emb|CAB90043.3| ATP synthase beta subunit [Chrysosplenium iowense]
          Length = 497

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 20  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLMRGMDVIDTGAALSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 433


>gi|284007028|emb|CBA72303.1| type III secretion cytoplasmic ATP synthase
           (YscN,SpaL,MxiB,HrcN,EscN) [Arsenophonus nasoniae]
          Length = 457

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 158/416 (37%), Positives = 226/416 (54%), Gaps = 12/416 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  +++    VT        G+  +   +      +V+ I     ++ P      +  
Sbjct: 51  GKVQEVSTNLVKVTL--PGAKQGELCLIDNR---LAAEVVTIKAQEAWLSPFDSTIGLVS 105

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G   R+       G +++ LG+P++     G+        +  P  + RQ + 
Sbjct: 106 GACVERLGHGHRVRVGEHLLGGIVDGLGRPLEKMPIAGE---WRSNHNAAPDPLTRQLIS 162

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +   TGI+ ID    L  GQRIG+FA +G GKSTLL M AR    D V+++LVGERGREV
Sbjct: 163 EVLPTGIKAIDGILTLGVGQRIGIFAAAGGGKSTLLGMLARGCEADVVVLALVGERGREV 222

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+         KK+++VVATSD  P+ R  A LTA TIAEYF  +G  VLL++DS+TR
Sbjct: 223 REFLDNHLPATARKKTILVVATSDRPPLERMKASLTATTIAEYFRDQGKQVLLLVDSLTR 282

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + REI   +GE PVA G+P SVF  +  LLER GP++   G+I+A+ +VLV+GDN N
Sbjct: 283 FARAAREIGLAAGEPPVANGFPPSVFVHMAALLERAGPAKV--GSISAIYTVLVEGDNMN 340

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD VRSILDGHIVL+R LA  G +P +D  ASVSR+ D   S         L  L  
Sbjct: 341 EPVADEVRSILDGHIVLSRQLAAAGHFPAIDVNASVSRVMDNIVSKTHSLHARRLRQLRA 400

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            F++ + +  +G Y+ G D   D+A+ +   I  FL+Q   +  S     E   +L
Sbjct: 401 LFQDVQLLIRVGEYQSGQDKDTDEAIEKNHPINQFLRQDSDEWVSFYQTIENLNQL 456


>gi|228017024|gb|ACP51847.1| ATP synthase CF1 beta subunit [Pinus canariensis]
 gi|228017716|gb|ACP52528.1| ATP synthase CF1 beta subunit [Pinus pinaster]
          Length = 492

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 193/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S  +    G I+ I      V+     +  + + ++ +G+ +   
Sbjct: 1   MRKNPLVLG-----VSARVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLIVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|123444373|ref|YP_001008338.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166222426|sp|A1JTC6|ATPB_YERE8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122091334|emb|CAL14220.1| ATP synthase beta subunit protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|330861780|emb|CBX71953.1| ATP synthase subunit beta [Yersinia enterocolitica W22703]
          Length = 460

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  +G     + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVEGAAEKLVLEVQQQLGGGVVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V +      +       GR++N LG PID    +G+ +    I  + P   +
Sbjct: 61  DGLSRGLKVINLEHPIEVPVGKSTLGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               +   +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVSRARKIQRFLSQP 404


>gi|21684871|emb|CAD11562.1| ATP synthase beta subunit [Lyginia barbata]
          Length = 491

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGELPNIYNALVVQG--RDLVGQEINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LGKP+D    +    +S  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGKPVDNLGPVDTSTIS-PIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIELETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYIEMKESGVINERNLAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|15705376|gb|AAL05616.1| AtpB [Daphnandra micrantha]
          Length = 487

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|69214424|gb|AAZ03792.1| ATP synthase beta chain [Yucca schidigera]
          Length = 495

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTRAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|293369739|ref|ZP_06616315.1| ATP synthase F1, alpha subunit [Bacteroides ovatus SD CMC 3f]
 gi|292635161|gb|EFF53677.1| ATP synthase F1, alpha subunit [Bacteroides ovatus SD CMC 3f]
          Length = 527

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 170/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINANVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIRVGEDMLGRVIDPLGEPLDGKGLVGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 128 YDMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRSNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGALDYTIVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIISQEEVAREMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGTRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITALTIDKGRKNGQLLIQPQ 450


>gi|254464046|ref|ZP_05077457.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium Y4I]
 gi|206684954|gb|EDZ45436.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium Y4I]
          Length = 474

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 108/417 (25%), Positives = 188/417 (45%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V        + + +  + +    + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVQFDDHLPAILNALHTENEGKTLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    I       GR++N +G+P+D    +   + +  I    P    +   
Sbjct: 66  RGRAVSDTGAPISIPVGNATLGRILNVVGEPVDEKGPVNATE-TRAIHQPAPEFSEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYWEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+ S +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYKVASDVQQILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|110915620|gb|ABH02598.1| ATP synthase beta subunit [Deschampsia cespitosa subsp. cespitosa]
          Length = 472

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 34  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 93

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 94  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 152

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 153 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 273 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 331 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 391 D-RLTVARARKIERFLSQP 408


>gi|124361790|gb|ABN09337.1| ATP synthase beta subunit [Royena cordata]
          Length = 459

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAALSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|7582350|gb|AAF64290.1| ATP synthase beta subunit [Iriartea deltoidea]
          Length = 498

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNSRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708329|emb|CAB89908.1| ATP synthase beta subunit [Helwingia japonica]
 gi|14718070|gb|AAK72776.1| ATP synthase beta subunit [Helwingia japonica]
          Length = 486

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKETLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVSRARKIERFLSQP 426


>gi|124361762|gb|ABN09323.1| ATP synthase beta subunit [Diospyros sp. K20600]
 gi|124361786|gb|ABN09335.1| ATP synthase beta subunit [Maba magnifolia]
          Length = 453

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|119367992|dbj|BAF40478.1| ATP synthase beta subunit [Synadenium grantii]
          Length = 489

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTEAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|157136033|ref|XP_001656737.1| ATP synthase beta subunit [Aedes aegypti]
 gi|108881105|gb|EAT45330.1| ATP synthase beta subunit [Aedes aegypti]
          Length = 504

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 114/426 (26%), Positives = 196/426 (46%), Gaps = 21/426 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLG 84
           + ++      V        + + +  Q + S  + +V   +  + V    +   E +  G
Sbjct: 39  VVAVIGAVVDVQFDDNLPPILNALEVQERGSRLVLEVAQHLGENTVRTIAMDGTEGLVRG 98

Query: 85  DLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
             V   G   RI   A   GR+IN +G+PID    + + +LS  I ++ P  ++    ++
Sbjct: 99  QRVLDTGSPIRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQE 157

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200
              TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER R
Sbjct: 158 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 217

Query: 201 EVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           E  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +V
Sbjct: 218 EGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDV 277

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +
Sbjct: 278 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQA 335

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   
Sbjct: 336 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYN 395

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +VF 
Sbjct: 396 IARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEVFT 451

Query: 432 EITKKL 437
               KL
Sbjct: 452 GHAGKL 457


>gi|56675898|emb|CAB90095.2| ATP synthase beta subunit [Cornus mas]
          Length = 464

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 4   GRIVXIIGPVLXVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATEGLTRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLIVARARKIERFLSQP 417


>gi|8452720|emb|CAB89968.1| ATP synthase beta subunit [Penthorum sedoides]
          Length = 497

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V         + + +V +G   D  GQ I +  ++        V    
Sbjct: 20  GRITQIIGPVLDVAFSPGNMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAIA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKXGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 433


>gi|27435860|gb|AAO13253.1| ATP synthase beta subunit [Ascarina lucida]
          Length = 491

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 180/420 (42%), Gaps = 27/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V   K  D +GQ + +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVVVKGRDTVGQQMNVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|4063528|gb|AAC98322.1| ATP synthase beta subunit [Berrya javanica]
          Length = 456

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 170/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 25  GQDTXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVTDTGAPLSVPVGGATLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 144 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAE 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 322 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKIERFLSQP 408


>gi|124265390|ref|YP_001019394.1| F0F1 ATP synthase subunit beta [Methylibium petroleiphilum PM1]
 gi|190358680|sp|A2SC70|ATPB_METPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|124258165|gb|ABM93159.1| Sodium-transporting two-sector ATPase [Methylibium petroleiphilum
           PM1]
          Length = 471

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 115/418 (27%), Positives = 185/418 (44%), Gaps = 19/418 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
            N     G I         V     Q   + D +  +G       Q  ++   +V    +
Sbjct: 2   ANTQAAVGKIVQCIGAVVDVEFPRDQMPRVYDALKMEGSALTLEVQ-QQLGDGVVRTIAL 60

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V + G    +       GR+++ LG PID    +   +LSM I  K P 
Sbjct: 61  GSSDGLRRGLMVSNTGAAITVPVGKATLGRIMDVLGSPIDERGPVS-AELSMPIHRKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                  ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 120 YDELSPSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 179

Query: 192 ISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +F  +               K  +V    +E P  R    LT +TIAE
Sbjct: 180 FAGVGERTREGNDFYHEMSDSKVVVQEDLTQSKVAMVYGQMNEPPGNRLRVALTGLTIAE 239

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  +
Sbjct: 240 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 298 VGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      ++  ++ R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 358 NVVGEEHYNTTRAVQQVLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 414


>gi|300741313|ref|ZP_07071334.1| ATP synthase F1, alpha subunit [Rothia dentocariosa M567]
 gi|300380498|gb|EFJ77060.1| ATP synthase F1, alpha subunit [Rothia dentocariosa M567]
          Length = 552

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 90/421 (21%), Positives = 167/421 (39%), Gaps = 23/421 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
           +     V  L   V   + +  +      LG    ++   + +  +G    I  G  V  
Sbjct: 50  SDGIARVEGL-PSVMANELLRFEDG---TLGLAQNLDTRDIGVIILGDFTGIEEGQPVHR 105

Query: 90  WGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +     + GRV++ LG PID    + K +    +  + P    R+ V +  +TG
Sbjct: 106 TGEVLSVPVGDAYLGRVVDPLGNPIDDLGPI-KDEGRRALELQAPGVTQRKSVHEPLQTG 164

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGER 198
           ++ ID   P+  GQR  +      GK      T+L+  A  +  D     + +   VG++
Sbjct: 165 LKAIDAMIPIGRGQRQLIIGDRQTGKTAIAVDTILNQKANWETGDPSKQVRCVYVAVGQK 224

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              +             + + +V A + ++   + +AP T   I +++   G +VL+I D
Sbjct: 225 ASTIAAVRHTLETRGALEYTTIVAAPASDAAGFKYLAPYTGSAIGQHWMYGGKHVLIIFD 284

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLV 315
            +++ A + R ++      P    YP  VF    RLLER      E   G++T    +  
Sbjct: 285 DLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSMTGFPIIET 344

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
             ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A +   KK+  +
Sbjct: 345 KANDVSAFIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAQTKAMKKVSGT 404

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLSSEDVFQEIT 434
           L   + ++   R +     +   +D      + +   + + L+Q   +  + E+    I 
Sbjct: 405 LKLDLAQY---RAMEAFAMFASDLDDASKAQLTRGARLTELLRQPQYTPYAVEEQVVSIW 461

Query: 435 K 435
            
Sbjct: 462 A 462


>gi|170178359|gb|ACB10599.1| ATP synthase beta subunit [Cornus canadensis]
          Length = 455

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGTNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVVGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEDD-RLTVARARKIERFLSQP 395


>gi|158602277|gb|ABW74605.1| ATP synthase beta subunit [Krapfia ranunculina]
          Length = 486

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|155029373|dbj|BAF75571.1| ATP synthase beta subunit [Monadenium crispum]
          Length = 489

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTEAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910790|gb|ABI48127.1| ATPase beta subunit [Leiomylia anomala]
          Length = 456

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 108/394 (27%), Positives = 174/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           +V QGKNS   GQ I +  ++        V    +   + +  G  V   G    +    
Sbjct: 9   LVVQGKNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGE 66

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +   + +  I    P           F+TGI+V+D+  P  
Sbjct: 67  ATLGRIFNVLGEPVDNLGPVD-ANTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 186 EQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             +  D   VL+R LA +G YP VDP  S S +        +  +    +   + R++E 
Sbjct: 304 TFAHSDATTVLSRGLAAKGIYPAVDPSDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 363

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|62902817|gb|AAY19323.1| ATP synthase beta subunit [Mortonia greggii]
          Length = 488

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSPGKMPNIYNALVVRGQDTTGHKINVICEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLXMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|12045261|ref|NP_073072.1| F0F1 ATP synthase subunit beta [Mycoplasma genitalium G37]
 gi|2506209|sp|P47639|ATPB_MYCGE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|3844991|gb|AAC71627.1| ATP synthase F1, beta subunit [Mycoplasma genitalium G37]
 gi|166078639|gb|ABY79257.1| ATP synthase F1, beta subunit [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 476

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 122/408 (29%), Positives = 199/408 (48%), Gaps = 16/408 (3%)

Query: 24  GYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQVIRI-NLDIVYICPVGIGEE 80
           G +  +      V  +   Q   + D +  Q K S+   +  ++   DIV    +G  E 
Sbjct: 10  GKVHQVIGPVVDVIFSESKQLPRVYDCLSVQLKKSELFLEATQLIGDDIVRCIALGPTEG 69

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++    V ++     +       GR+ N LG+PIDG + L K    + I    P    + 
Sbjct: 70  LARNVKVTNYNHPIEVPVGKNVLGRMFNVLGEPIDGKEPLPKKP-KLSIHRNPPAFDEQP 128

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
                F+TGI+VID+ TP   G +IG+F G+G+GK+ L+     +   +     + + VG
Sbjct: 129 NTVDIFETGIKVIDLLTPYVRGGKIGLFGGAGVGKTVLVQELIHNIAKEHSGLSVFAGVG 188

Query: 197 ERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLL 254
           ER RE  +   +   G  + K+V+V    +E P  R    LTA+T+AEYF      NVLL
Sbjct: 189 ERTREGNDLYYEMIQGGVIDKTVLVFGQMNEPPGARMRVALTALTMAEYFRDHDNQNVLL 248

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  ++   G+IT+V ++ 
Sbjct: 249 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLAIEMGKLQERIASTKT--GSITSVQAIY 306

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD   VL+R++A  G +P ++PL S SRL D +    +  K+ 
Sbjct: 307 VPADDLTDPAPATTFTHLDAKTVLDRNIAALGIFPAINPLESTSRLLDPSVVGINHYKVA 366

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQS 420
             + +++ RF E +DI  I G     D   DK +  +   I +FL Q 
Sbjct: 367 LGVQNILQRFAELQDIIAILGIDELSDE--DKIIVERARRIRNFLSQP 412


>gi|260551344|ref|ZP_05825545.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624]
 gi|260405658|gb|EEW99149.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624]
          Length = 464

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/430 (25%), Positives = 188/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERTSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLTVTSTNAPISVPVGTATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  ++ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARAVQNVLQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|253574262|ref|ZP_04851604.1| ATP synthase F1, beta subunit [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846739|gb|EES74745.1| ATP synthase F1, beta subunit [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 463

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 189/409 (46%), Gaps = 17/409 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G + S+      +     Q   + + +  + ++  +   V+     +  ++V    +   
Sbjct: 4   GRVVSVMGPVVDIEFERGQLPEIYNAIKIEKQDGQS-ALVLEASNHLGDNLVRCIAMAST 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +   +    RV N LG+PID        +L   I  + P   +
Sbjct: 63  DGLVRGTEAIDLGAPISVPVGSATLSRVFNVLGEPIDNKGE-ANSELRYPIHREPPKFED 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+VID+  P   G +IG+F G+G+GK+  +     +   +     + + 
Sbjct: 122 LSTQAEMLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVTIQELIHNIAQEHGGISVFAG 181

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      ++K+ +V    +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYMEMTESGVIEKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++ +
Sbjct: 242 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAWSADEKK 371
           + V  D++ DP   +  + LD    L R ++E+G +P VDPLAS SR+   +    +   
Sbjct: 300 IYVPADDYTDPAPATTFAHLDATTNLERKISEKGIFPAVDPLASSSRILTPEIVGEEHYA 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 360 VAQGVKQILARYKELQDIIAILGMDELSDDD-KTLVARARKIERFLSQP 407


>gi|110915700|gb|ABH02638.1| ATP synthase beta subunit [Sphenopus divaricatus]
          Length = 471

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 33  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 92

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               + +   +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 93  NLGPV-ESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 151

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 152 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 211

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 212 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 271

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 272 XPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 329

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 330 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 389

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 390 D-RLTVARARKIERFLSQP 407


>gi|157285019|gb|ABV31249.1| ATPase [Aliivibrio logei]
          Length = 431

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G    +  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYANLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     +   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIYSVYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    YP  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAYPGDVFYLHSRLLERAARVSEAYVENFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 410


>gi|14327833|gb|AAF98987.2| ATP synthase beta subunit [Rhodoleia championii]
          Length = 478

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D + Q I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|309775243|ref|ZP_07670253.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916995|gb|EFP62725.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 466

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 108/363 (29%), Positives = 181/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  + V    +G  + +  G      G   R+       GR+ N LG+ IDG   +G  D
Sbjct: 50  IGDERVRCIAMGGTDGLVRGMEAIDTGSAIRVPVGKEILGRMFNVLGREIDGLGPVG-TD 108

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I  + P    +Q   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 109 NTLPIHRQAPGFEEQQTSAEMLETGIKVIDLLCPYSKGGKIGLFGGAGVGKTVLIQELIH 168

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     +++ VGER RE  +   +     +  K+V+V    +ESP  R    LT +
Sbjct: 169 NIAKEHGGMSVVTGVGERTREGNDMYHEMKDSGVLDKTVLVYGQMNESPGARMRVGLTGL 228

Query: 240 TIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 229 TMAEYFRDHDHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 287

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R +A  G YP VDPL S S
Sbjct: 288 -TSTKDGSITSVQAIYVPADDLTDPAPATAFTHLDAKTVLDRDIAALGIYPAVDPLESSS 346

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   +  ++ R++E +DI  I G     +      V++   + +FL
Sbjct: 347 RILDPLVVGEEHYEVARGVQTILQRYKELQDIIAILGMDELSEED-KIIVNRARRVRNFL 405

Query: 418 KQS 420
            Q 
Sbjct: 406 SQP 408


>gi|307181472|gb|EFN69064.1| ATP synthase subunit beta, mitochondrial [Camponotus floridanus]
          Length = 515

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 191/428 (44%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +  Q +    + +V   +  + V    +   E + 
Sbjct: 50  GKVVAVIGAVVDVQFEDALPPILNALEVQNRTPRLVLEVAQHLGENTVRTIAMDGTEGLV 109

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   RI   A   GR+IN +G+PID    +   D    I +  P  +     
Sbjct: 110 RGQNVLDSGYPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKLAPIHADAPEFVEMSVE 168

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 169 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 228

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 229 TREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 288

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 289 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 346

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      + 
Sbjct: 347 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 406

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 407 YNIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEV 462

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 463 FTGHAGKL 470


>gi|270339749|ref|ZP_06005902.2| ATP synthase [Prevotella bergensis DSM 17361]
 gi|270333900|gb|EFA44686.1| ATP synthase [Prevotella bergensis DSM 17361]
          Length = 528

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 91/430 (21%), Positives = 168/430 (39%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +++     +  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTVSDGVARIYGL-RNCEANELLEFENG---TMAIVMNLEEDNVGCILLGSAIGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   +   +   M +  K P  + RQ
Sbjct: 85  KEGQSVKRTHRIASIRVNDNFLGRVVNPLGEAIDGKGEIDLTESFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-------VII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +   +         I 
Sbjct: 145 PVKEPLQTGLKSVDSMIPIGRGQRELIIGDRQTGKTAIAVDTIINQKGNYEAGKPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   +E   G      S++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVANLVETLRGYGALPYSIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGYH 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFFLHSRLLERAARINNQQEVAEQMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L  +L  +G  P +
Sbjct: 325 DLPECLEGHVRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETNLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQVKSMKKIAGTLKIDMAQYRELE---SFSKFASDMDPVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|237718121|ref|ZP_04548602.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. 2_2_4]
 gi|229452542|gb|EEO58333.1| F0F1 ATP synthase subunit alpha [Bacteroides sp. 2_2_4]
          Length = 527

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 170/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINANVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIRVGEDMLGRVIDPLGEPLDGKGLVGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 128 YDMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRSNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGALDYTIVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIISQEEVAREMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGTRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITALTIDKGRKNGQLLIQPQ 450


>gi|124302913|ref|YP_001023708.1| ATP synthase CF1 beta subunit [Angiopteris evecta]
 gi|190358253|sp|A2T340|ATPB_ANGEV RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|110628311|gb|ABG79607.1| ATP synthase CF1 beta subunit [Angiopteris evecta]
          Length = 492

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 115/428 (26%), Positives = 186/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINL------- 67
           S  +    GYI+ I      V     +   + + ++ +G+N    GQ I +         
Sbjct: 11  STAVEKNAGYITQIIGPVLDVAFSPGKLPNIYNSLIVKGQNPA--GQEINVTCEVQQLLG 68

Query: 68  -DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S
Sbjct: 69  NDRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVDAGTTS 128

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 129 -PIHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++ +SG +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSASSGRMPSAVGYQPTLATEMGSL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  +  D   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 425 IERFLSQP 432


>gi|52082885|gb|AAU26023.1| ATPase beta subunit [Gymnotheca involucrata]
          Length = 476

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|5758915|gb|AAD50889.1| ATP synthase beta subunit [Stichoneuron caudatum]
          Length = 496

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G ++ I      V      +      FVV   K  D  GQ I +  ++        V   
Sbjct: 21  GRVAQIIGPVLDVFFPPGKMPNIYNAFVV---KGRDTAGQQINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|62085206|gb|AAX63007.1| ATP synthase beta subunit [Tripterygium regelii]
          Length = 487

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINLICEVQQLLGNNQVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708654|emb|CAB90002.1| ATP synthase beta subunit [Chorigyne pendula]
          Length = 490

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|27435901|gb|AAO13279.1| ATP synthase beta subunit [Schisandra chinensis]
          Length = 483

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLMRGMKVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|293375573|ref|ZP_06621847.1| ATP synthase F1, beta subunit [Turicibacter sanguinis PC909]
 gi|325836771|ref|ZP_08166238.1| ATP synthase F1, beta subunit [Turicibacter sp. HGF1]
 gi|292645790|gb|EFF63826.1| ATP synthase F1, beta subunit [Turicibacter sanguinis PC909]
 gi|325491149|gb|EGC93438.1| ATP synthase F1, beta subunit [Turicibacter sp. HGF1]
          Length = 467

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 188/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCL-----GDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           +  G+I ++      V   L     +      D+ V   + S  L   +++   +V    
Sbjct: 1   MATGHIVAVIGPVVDVKFGLDHLPAIYNALTVDYEVGGERKSLTLEVAVQLGDGVVRTVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G     I  + P
Sbjct: 61  MDATDGLVRGLEVVDTGNAISVPVGEATLGRIFNVLGQPVDNKGEVPAGTPHEGIHKEAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     
Sbjct: 121 KFEELSTTVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGIS 180

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK- 248
           + + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  + 
Sbjct: 181 VFAGVGERTREGNDLYHEMTESGVINKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEL 240

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  ++G+IT
Sbjct: 241 KQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKEGSIT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D++ DP   +  + LD    L R +A  G YP VDPLAS SR         
Sbjct: 299 SIQAVYVPADDYTDPAPATTFAHLDATTNLERRIAAMGIYPAVDPLASTSRALSPDIVGQ 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +  ++ R+ E +DI  I G     +    K VH+   +  FL QS
Sbjct: 359 EHYDVARRVQMMLQRYRELQDIIAILGMDELSEED-KKVVHRARRVQLFLSQS 410


>gi|224830502|gb|ACN66346.1| ATP synthase beta chain [Chondrodendron tomentosum]
          Length = 445

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 184/422 (43%), Gaps = 29/422 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFXTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPXTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I   L Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERLLSQP 428

Query: 421 PS 422
             
Sbjct: 429 XF 430


>gi|21684893|emb|CAD11573.1| ATP synthase beta subunit [Flagellaria indica]
          Length = 491

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V   S  +       VV   K  D +G  I +  ++        V   
Sbjct: 15  GSIIQIIGPVLDVNFPSGKLPNIYNALVV---KGRDTVGHQINVTCEVQQLLGNNRVRAV 71

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 72  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATSPIHRSA 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 131 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 190

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 191 SVFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 250

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 251 AEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 309 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTM 368

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 369 LQPRIVGDEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 427

Query: 420 S 420
            
Sbjct: 428 P 428


>gi|6017836|gb|AAF01652.1| ATP synthase beta subunit [Saururus cernuus]
          Length = 489

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|73968432|ref|XP_531639.2| PREDICTED: similar to ATP synthase beta chain, mitochondrial
           precursor isoform 1 [Canis familiaris]
          Length = 527

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/440 (25%), Positives = 196/440 (44%), Gaps = 25/440 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLV------VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           ++ +   L Q A DY+             G I ++      V        + + +  QG+
Sbjct: 32  LRASPAAL-QSARDYATQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGR 90

Query: 55  NSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKP 112
            +  + +V   +    V    +   E +  G  V   G   +I       GR++N +G+P
Sbjct: 91  ETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEP 150

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           ID    + K      I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+
Sbjct: 151 IDERGPI-KTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 209

Query: 173 GKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVA 222
           GK+ L+     +         + + VGER RE  +   + +        D   K  +V  
Sbjct: 210 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYG 269

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARG 281
             +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A G
Sbjct: 270 QMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVG 329

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           Y  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R+
Sbjct: 330 YQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 387

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +AE G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G     +
Sbjct: 388 IAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILGMDELSE 447

Query: 401 LILDKAVHQVPIIYDFLKQS 420
                 V +   I  FL Q 
Sbjct: 448 ED-KLTVSRARKIQRFLSQP 466


>gi|315048499|ref|XP_003173624.1| ATP synthase subunit beta [Arthroderma gypseum CBS 118893]
 gi|311341591|gb|EFR00794.1| ATP synthase subunit beta [Arthroderma gypseum CBS 118893]
          Length = 520

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 188/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  L   Y+       G I  +      V   ++ +   L   V   G     L     
Sbjct: 34  ALQALTARYASTDSANIGKIHQVIGAVVDVKFDTETLPSILNGLVTDNGGQKLVLEVAQH 93

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +   E +  G  V   G   +I       GR++N  G PID    + KG 
Sbjct: 94  LGERVVRTIAMDGTEGLVRGAKVTDTGLPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGV 152

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 153 KMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 212

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 213 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 272

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 273 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 332

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 333 QERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 390

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      D     + +  ++  ++  +DI  I G     +      V +   
Sbjct: 391 LDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 449

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I   L
Sbjct: 450 MQRFLSQP---FTVAQVFTGIEGAL 471


>gi|242241387|ref|YP_002989568.1| F0F1 ATP synthase subunit beta [Dickeya dadantii Ech703]
 gi|242133444|gb|ACS87746.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech703]
          Length = 460

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 107/408 (26%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPNVYDALEVENGAEKLVLEVQQQLGGGVVRCIAMGSS 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  +V       +       GR++N LG P+D    +G+ +    I    P   +
Sbjct: 61  DGLRRGLSVVNLEHPIEVPVGKATLGRIMNVLGDPVDMKGPIGEEE-RWSIHRAAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|241895225|ref|ZP_04782521.1| F0F1 ATP synthase subunit beta [Weissella paramesenteroides ATCC
           33313]
 gi|241871531|gb|EER75282.1| F0F1 ATP synthase subunit beta [Weissella paramesenteroides ATCC
           33313]
          Length = 466

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 116/428 (27%), Positives = 196/428 (45%), Gaps = 19/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSDNLGQV-IRINLDIVYICPV 75
           +  G +  +      +   S    + D     ++ +G +     +V + +   +V    +
Sbjct: 1   MNTGQVVQVIGPVVDIAFPSDS-KIPDINNALIIDKGDDQTLTVEVSLSLGDGVVRTIAM 59

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G       +   +       GRV N LG+P+DG ++LG       I    P 
Sbjct: 60  DSTDGLRRGMTATDTEKSISVPVGEATLGRVFNVLGEPVDGGEALGDDVQRDPIHRDAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
                   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+
Sbjct: 120 YDELSTSTEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISV 179

Query: 195 ---VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
              VGER RE  +   +  G  + K + +V    +E P  R    LT +TIAE+F     
Sbjct: 180 FTGVGERTREGNDMYYEMQGSGVLKQTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVNG 239

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T+
Sbjct: 240 QDVLLFIDNIYRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSAD 368
           + +V V  D++ DP   +  + LD    L RSL ++G YP VDPLAS S  LA +    +
Sbjct: 298 IQAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLASTSTALAPEIVGQE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              + + + H + R+ E +DI  I G     D      V++   I  FL Q     S  +
Sbjct: 358 HYDVATEVQHTLQRYRELQDIISILGMDELSDEE-KTIVNRARRIQFFLSQP---FSVAE 413

Query: 429 VFQEITKK 436
            F  +  +
Sbjct: 414 TFTGLPGQ 421


>gi|219552250|gb|ACL26840.1| ATP synthase beta chain [Phyllanthus flexuosus]
          Length = 423

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 414


>gi|297192042|ref|ZP_06909440.1| F0F1 ATP synthase subunit alpha [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197719508|gb|EDY63416.1| F0F1 ATP synthase subunit alpha [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 530

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 88/435 (20%), Positives = 163/435 (37%), Gaps = 24/435 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYQPDAASREEVGTVSLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFNGIEEGQPVTRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D   P+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPGVMARKSVHEPMQTGYKAVDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDPKKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQYRELEAFAAFG---SDLDAASKAQMER 424

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ+    
Sbjct: 425 GKRMVELLKQAQYQP 439


>gi|124361798|gb|ABN09341.1| ATP synthase beta subunit [Tetraclis baroni]
          Length = 465

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|90578412|ref|ZP_01234223.1| ATP synthase subunit B [Vibrio angustum S14]
 gi|90441498|gb|EAS66678.1| ATP synthase subunit B [Vibrio angustum S14]
          Length = 461

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  +      V      V        +   ++++ + +V + I   +V    +G 
Sbjct: 1   MSTGKIVKVIGAVVDVEFDQDSVPRVYDALTLSDSEHAELVLEVQQQIGSGVVRCIAMGS 60

Query: 78  GEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G D+V       +       GR++N LG PID    +G+      I  + P   
Sbjct: 61  SDGLRRGLDVVNTKAPITVPVGEETLGRIMNVLGTPIDECGEIGE-KTKYAIHREAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 EQSNSSELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFT 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +     +  K  +V    +E P  R    LT +TIAE F  +G +V
Sbjct: 180 GVGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +
Sbjct: 240 LLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      D   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGQDHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 VARGVQTVLQRYKELKDIIAILGMDELSEED-KQTVSRARKIERFLTQP 405


>gi|37721027|gb|AAN32516.1| ATP synthase beta subunit [Yucca glauca]
          Length = 494

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTRAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|326479862|gb|EGE03872.1| ATP synthase subunit beta [Trichophyton equinum CBS 127.97]
          Length = 520

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 188/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  L   Y+       G I  +      V   ++ +   L   V   G     L     
Sbjct: 34  ALQALTARYASTDAANIGKIHQVIGAVVDVKFDTETLPSILNGLVTDNGGQKLVLEVAQH 93

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +   E +  G  V   G   +I       GR++N  G PID    + KG 
Sbjct: 94  LGERVVRTIAMDGTEGLVRGAKVTDTGLPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGV 152

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 153 KMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 212

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 213 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 272

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 273 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 332

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 333 QERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 390

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      D     + +  ++  ++  +DI  I G     +      V +   
Sbjct: 391 LDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 449

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I   L
Sbjct: 450 MQRFLSQP---FTVAQVFTGIEGAL 471


>gi|327300803|ref|XP_003235094.1| ATP synthase subunit beta [Trichophyton rubrum CBS 118892]
 gi|326462446|gb|EGD87899.1| ATP synthase subunit beta [Trichophyton rubrum CBS 118892]
          Length = 520

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 188/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  L   Y+       G I  +      V   ++ +   L   V   G     L     
Sbjct: 34  ALQALTARYASTDAANIGKIHQVIGAVVDVKFDTETLPSILNGLVTDNGGQKLVLEVAQH 93

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +   E +  G  V   G   +I       GR++N  G PID    + KG 
Sbjct: 94  LGERVVRTIAMDGTEGLVRGAKVTDTGLPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGV 152

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 153 KMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 212

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 213 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 272

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 273 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 332

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 333 QERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 390

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      D     + +  ++  ++  +DI  I G     +      V +   
Sbjct: 391 LDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 449

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I   L
Sbjct: 450 MQRFLSQP---FTVAQVFTGIEGAL 471


>gi|300719162|ref|YP_003743965.1| ATP synthase, F1 complex, beta subunit [Erwinia billingiae Eb661]
 gi|299064998|emb|CAX62118.1| ATP synthase, F1 complex, beta subunit [Erwinia billingiae Eb661]
          Length = 460

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 184/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSS 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G + V       +       GR++N LG+PID    +G+ +    I    P   +
Sbjct: 61  DGLKRGLETVDLEHPIEVPVGVATLGRIMNVLGEPIDMKGDIGEEE-RWAIHRAAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 QSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLSQP 404


>gi|170178332|gb|ACB10585.1| ATP synthase beta subunit [Cornus alternifolia]
          Length = 455

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|147905995|ref|NP_001083034.1| mitochondrial ATP synthase beta subunit [Danio rerio]
 gi|133778774|gb|AAI34216.1| Zgc:163069 protein [Danio rerio]
          Length = 524

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 194/431 (45%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I+++      V    Q   + + +  QG++   + +V   +  + V    +   E
Sbjct: 55  TSNGQITAVIGAVVDVQFEDQLPPILNALEVQGRSPRLILEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    +   D    I +  P  +  
Sbjct: 115 GLVRGQNVLDTGAPIKIPVGPETLGRIMNVIGEPIDERGPIV-TDKFAAIHADAPEFVEM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVQQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRILDPNIIG 411

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 412 EEHYNIARGVQKILQDYKSLQDIIAILGMDELSEED-KLIVSRARKIQRFLSQP---FQV 467

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 468 AEVFTGHAGKL 478


>gi|94468834|gb|ABF18266.1| F0F1-type ATP synthase beta subunit [Aedes aegypti]
          Length = 504

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 114/426 (26%), Positives = 196/426 (46%), Gaps = 21/426 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLG 84
           + ++      V        + + +  Q + S  + +V   +  + V    +   E +  G
Sbjct: 39  VVAVIGAVVDVQFDDNLPPILNALEVQERGSRLVLEVAQHLGENTVRTIAMDGTEGLVRG 98

Query: 85  DLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
             V   G   RI   A   GR+IN +G+PID    + + +LS  I ++ P  ++    ++
Sbjct: 99  QRVLDTGSPIRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQE 157

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200
              TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER R
Sbjct: 158 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 217

Query: 201 EVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           E  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +V
Sbjct: 218 EGNDLYNEMIEGGVIPLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDV 277

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +
Sbjct: 278 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQA 335

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   
Sbjct: 336 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYN 395

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +VF 
Sbjct: 396 IARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEVFT 451

Query: 432 EITKKL 437
               KL
Sbjct: 452 GHAGKL 457


>gi|49617846|gb|AAT67604.1| ATP synthase CF1 beta subunit B [Hesperocallis undulata]
          Length = 463

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 11  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 71  ATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|224830528|gb|ACN66359.1| ATP synthase beta chain [Cyclea hypoglauca]
          Length = 473

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D LGQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|224418195|ref|ZP_03656201.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT
           98-5491]
 gi|253827522|ref|ZP_04870407.1| ATP synthase F1 sector beta subunit [Helicobacter canadensis MIT
           98-5491]
 gi|253510928|gb|EES89587.1| ATP synthase F1 sector beta subunit [Helicobacter canadensis MIT
           98-5491]
          Length = 471

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 194/409 (47%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I  +      +   S    + + +       G++   + +V     D  V    + + 
Sbjct: 7   GKIVQVMGPVVDIDFESYLPAINEALDIDFSIDGQSRKLVLEVAAHIGDNRVRAIAMDMT 66

Query: 79  EEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G+ V        +       GR+ N  G  IDG ++L   +    I  + P   N
Sbjct: 67  EGLTRGEKVVARGNPIMVPVGEQVLGRIFNVTGDVIDGGEALNNPE-KWSIHREAPTFEN 125

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 126 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAG 185

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 186 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 245

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +
Sbjct: 246 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQA 303

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      D  +
Sbjct: 304 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYR 363

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + +S+  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 364 VATSVQQVLQKYKDLQDIIAILGMDELSEED-KKVVERARKIEKFLSQP 411


>gi|160884436|ref|ZP_02065439.1| hypothetical protein BACOVA_02420 [Bacteroides ovatus ATCC 8483]
 gi|299146007|ref|ZP_07039075.1| ATP synthase F1, alpha subunit [Bacteroides sp. 3_1_23]
 gi|156110175|gb|EDO11920.1| hypothetical protein BACOVA_02420 [Bacteroides ovatus ATCC 8483]
 gi|298516498|gb|EFI40379.1| ATP synthase F1, alpha subunit [Bacteroides sp. 3_1_23]
          Length = 527

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 96/446 (21%), Positives = 170/446 (38%), Gaps = 37/446 (8%)

Query: 6   ETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           + L +  E  + N+ + + G +  ++     +  L +     + +            V+ 
Sbjct: 12  DILRKQLEGINANVQLDEIGTVLQVSDGVVRIYGL-RNAEANELLEFDNG---IKAIVMN 67

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G  ++I  G +V    R   I       GRVI+ LG+P+DG   +G   
Sbjct: 68  LEEDNVGAVLLGPTDKIKEGFVVKRTKRIASIRVGEGMLGRVIDPLGEPLDGKGLVGGEL 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 128 YDMPLERKAPGVIYRQPVNQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAIDTII 187

Query: 184 SDCFD-------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
           +   +         I   +G++G  V   +           ++VV AT+ +   L+  AP
Sbjct: 188 NQRSNFLAGDPVYCIYVAIGQKGSTVASIVNTLREYGALDYTIVVAATAGDPAALQYYAP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
                I EYF   G + L++ D +++ A + RE++           YP  +F    RLLE
Sbjct: 248 FAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLE 307

Query: 296 RIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           R                         K  G++TA+  +     + +  I  +V SI DG 
Sbjct: 308 RAAKIISQEEVAREMNDLPESLKGIVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQ 367

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I L   L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +
Sbjct: 368 IFLETDLFNQGTRPAINVGISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFSKF 424

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D I    + +       L Q  
Sbjct: 425 SSDMDPITALTIDKGRKNGQLLIQPQ 450


>gi|124361746|gb|ABN09315.1| ATP synthase beta subunit [Diospyros texana]
          Length = 465

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPINVTCEVQQLLGNNRVRTV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|119350451|gb|ABL63176.1| AtpB [Atractomorpha echinata]
          Length = 392

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 5   VRAVSMNPTDGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEPVDNMGPVN-NEETLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       S+   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYSCAQSIKKTLQRYKELQDIIAILGLDELSEED-RLVVTRARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|4995796|emb|CAB44269.1| H(+)-transporting ATP synthase [Sterculia apetala]
          Length = 481

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GXISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR++N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRILNVLGEPVDNFGPVD-TRTTSPIHKPAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+ K+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVXKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|24940160|emb|CAD43364.1| ATP synthase beta subunit [Anchusa officinalis]
          Length = 483

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|5758872|gb|AAD50846.1| ATP synthase beta subunit [Cyclanthus bipartitus]
          Length = 496

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|257853488|gb|ACV71746.1| ATP synthase beta subunit [Dissiliaria muelleri]
          Length = 489

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 185/423 (43%), Gaps = 29/423 (6%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
              G I  I      V     +   + + +V +G   D+ GQ I +  ++        V 
Sbjct: 10  TNRGRIVQIIGPVLDVAFPRGKMPNIYNALVVKG--RDSTGQQINVTCEVQQLLGNNRVR 67

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 68  TVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHR 126

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +  
Sbjct: 127 SAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHG 186

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+
Sbjct: 187 GVSVFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTAL 246

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 247 TMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 305

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 306 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTS 364

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +   S+   + R++E +DI  I G     +      V +   I  FL
Sbjct: 365 TMLQPNIVGTEHYETAQSVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 423

Query: 418 KQS 420
            Q 
Sbjct: 424 SQP 426


>gi|226324289|ref|ZP_03799807.1| hypothetical protein COPCOM_02069 [Coprococcus comes ATCC 27758]
 gi|225206737|gb|EEG89091.1| hypothetical protein COPCOM_02069 [Coprococcus comes ATCC 27758]
          Length = 611

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 115/407 (28%), Positives = 190/407 (46%), Gaps = 14/407 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V       C+ D +  +      + +V   +  D V    +   E +
Sbjct: 8   GRIVQVMGPVVDVVFEDGNLPCIKDALQVENNGKTCIMEVAQHLGNDEVRCLMLAASEGL 67

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ ID  + + +      I    P   ++  
Sbjct: 68  CKDMEVTATGSGIKVPVGEQTLGRLFNVLGETIDNGEEIKEDTEHWVIHRDPPSFEDQSP 127

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 128 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGE 187

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 188 RSREGNDLWTEMKASGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLF 247

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 248 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 305

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ +
Sbjct: 306 PADDLTDPAPATTFAHLDATTVLSRKVVEQGIYPAVDPLESNSRILEADIVGEEHYEVAN 365

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +T ++ +++E +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 366 RVTEVLQKYKELQDIIAILGMEELSDE--DKATVMRARKIQKFLSQP 410


>gi|158602267|gb|ABW74600.1| ATP synthase beta subunit [Enemion biternatum]
          Length = 489

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|124361772|gb|ABN09328.1| ATP synthase beta subunit [Euclea crispa]
 gi|124361774|gb|ABN09329.1| ATP synthase beta subunit [Euclea divinorum]
 gi|124361776|gb|ABN09330.1| ATP synthase beta subunit [Euclea natalensis]
 gi|124361792|gb|ABN09338.1| ATP synthase beta subunit [Royena glabra]
 gi|124361794|gb|ABN09339.1| ATP synthase beta subunit [Royena lucida]
 gi|124361796|gb|ABN09340.1| ATP synthase beta subunit [Royena lycioides]
 gi|221078809|gb|ACL99479.1| ATP synthase beta subunit [Euclea undulata]
          Length = 465

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAALSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|34539305|gb|AAQ74536.1| F1-ATPase alpha subunit [Globba winitii]
          Length = 371

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 153/371 (41%), Gaps = 20/371 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 8   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 65  VVDALGVPIDGFGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL- 214
            +      GK+ +      +               +   +G++   V + ++     N  
Sbjct: 124 LIIGDRQTGKTAIAIDTILNQKQMFSRGTSETLYCVYVAIGQKRSTVAQLVQILSEANAL 183

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + S++V AT+ +   L  +AP +   + EYF   G + L+I D +++ A + R+++    
Sbjct: 184 EYSILVAATASDPAPLLFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 243

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V SI 
Sbjct: 244 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISIT 303

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
            G I L   L   G  P ++   SVSR+   A     K++  S    + ++ E   +   
Sbjct: 304 VGQICLETELFYRGIRPAINVGFSVSRVGSAAQLRAMKEVCGSFKLELAQYRE---VAAF 360

Query: 393 GGYRPGVDLIL 403
             +   +D   
Sbjct: 361 AQFGSDLDAAT 371


>gi|7708321|emb|CAB90087.1| ATP synthase beta subunit [Guaiacum sanctum]
          Length = 475

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I      VT    +   + + +V    N   +GQ I +  ++        V    
Sbjct: 7   GHIXQIIGPVLDVTFPPGKMPXIYNALVVNXXN--TVGQZINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 65  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVDTSTTS-PIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|21684913|emb|CAD11583.1| ATP synthase beta subunit [Elegia asperiflora]
          Length = 491

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKLPNIYNALVIKG--RDIVGQQINVTCEVQQLLGNNRVRTVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATEGLMRGMEVIDTGAPLSVPVGKATLGRIFNVLGEPVDNLGPVDTS-ATSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +K +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKKASITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPQIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 428


>gi|74185232|dbj|BAE30095.1| unnamed protein product [Mus musculus]
          Length = 529

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 188/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG++S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATNFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|6729935|pdb|1MAB|B Chain B, Rat Liver F1-Atpase
 gi|93279423|pdb|2F43|B Chain B, Rat Liver F1-Atpase
          Length = 479

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ S  + +V   +    V    +   E
Sbjct: 8   TATGQIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTE 67

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 68  GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 126

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 127 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 186

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 187 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 246

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 247 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 304

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 305 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 364

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 365 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 417


>gi|321479063|gb|EFX90019.1| hypothetical protein DAPPUDRAFT_309746 [Daphnia pulex]
          Length = 533

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 191/429 (44%), Gaps = 21/429 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V    Q   + + +    ++   + +V   +  + V    +   E +
Sbjct: 65  NGKIVAVIGAVVDVQFEDQLPPILNALEVSNRSPRLILEVAQHLGENTVRTIAMDGTEGL 124

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +   D    I ++ P  +    
Sbjct: 125 IRGQPVLDTGSPIRIPVGPETLGRIMNVIGEPIDERGPIV-TDKFAAIHAEAPEFVEMNV 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 184 AQEILITGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 243

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 244 RTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+
Sbjct: 304 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITS 361

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     D 
Sbjct: 362 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMMDPNIIGDV 421

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                  +  ++  ++  +DI  I G     +      V +   I  FL Q        +
Sbjct: 422 HYNAARGVQKILQDYKSLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP---FQVAE 477

Query: 429 VFQEITKKL 437
           VF     KL
Sbjct: 478 VFTGHAGKL 486


>gi|227524281|ref|ZP_03954330.1| F0F1 ATP synthase subunit beta [Lactobacillus hilgardii ATCC 8290]
 gi|227088512|gb|EEI23824.1| F0F1 ATP synthase subunit beta [Lactobacillus hilgardii ATCC 8290]
          Length = 487

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 117/392 (29%), Positives = 186/392 (47%), Gaps = 14/392 (3%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           VH   +   + +V + +   +V    +   + +  G  V +      +       GRV N
Sbjct: 39  VHVSDDKTLVVEVALDLGDGVVRTIAMDGTDGLRRGMEVENTESSISVPVGNDTLGRVFN 98

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG    G       I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 99  VLGEPIDGGPEFGSDAERWPIHREAPKYDELSPSTEILETGIKVIDLLEPYIRGGKVGLF 158

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+ L+     +       IS+   VGER RE  +   +  G  +  K+ +V   
Sbjct: 159 GGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKTAMVYGQ 218

Query: 224 SDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF  + G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 219 MNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 278

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 279 QPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 336

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D      +   + + + H++ R+ E +DI  I G     D 
Sbjct: 337 TQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISILGMDELSDE 396

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                V++   I  FL QS    S  + F  +
Sbjct: 397 E-KTIVNRARRIQFFLSQS---FSVAEQFTGL 424


>gi|162286755|ref|YP_001083240.2| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ATCC 17978]
 gi|169632167|ref|YP_001705903.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii SDF]
 gi|169797644|ref|YP_001715437.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AYE]
 gi|184156498|ref|YP_001844837.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ACICU]
 gi|213155562|ref|YP_002317607.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB0057]
 gi|215484998|ref|YP_002327239.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294]
 gi|239503042|ref|ZP_04662352.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB900]
 gi|260557587|ref|ZP_05829801.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606]
 gi|301345728|ref|ZP_07226469.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB056]
 gi|301512770|ref|ZP_07238007.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB058]
 gi|301594499|ref|ZP_07239507.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB059]
 gi|332852654|ref|ZP_08434308.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150]
 gi|332869370|ref|ZP_08438748.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113]
 gi|332875632|ref|ZP_08443444.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059]
 gi|190358287|sp|A3M144|ATPB_ACIBT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739963|sp|B7H294|ATPB_ACIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739964|sp|B7I1W4|ATPB_ACIB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739965|sp|B2I102|ATPB_ACIBC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739966|sp|B0VNK4|ATPB_ACIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226739967|sp|B0VBP3|ATPB_ACIBY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169150571|emb|CAM88480.1| membrane-bound ATP synthase , F1 sector, beta-subunit
           [Acinetobacter baumannii AYE]
 gi|169150959|emb|CAO99574.1| membrane-bound ATP synthase , F1 sector, beta-subunit
           [Acinetobacter baumannii]
 gi|183208092|gb|ACC55490.1| F0F1-type ATP synthase, beta subunit [Acinetobacter baumannii
           ACICU]
 gi|193076046|gb|ABO10638.2| membrane-bound ATP synthase F1 sector, beta-subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213054722|gb|ACJ39624.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB0057]
 gi|213988424|gb|ACJ58723.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294]
 gi|260408760|gb|EEX02064.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606]
 gi|322506367|gb|ADX01821.1| atpD [Acinetobacter baumannii 1656-2]
 gi|323516235|gb|ADX90616.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332729122|gb|EGJ60469.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150]
 gi|332732788|gb|EGJ64004.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113]
 gi|332736205|gb|EGJ67220.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059]
          Length = 464

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/430 (25%), Positives = 188/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERTSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLTVTSTNAPISVPVGTATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  ++ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARAVQNVLQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|110915588|gb|ABH02582.1| ATP synthase beta subunit [Avenella flexuosa]
          Length = 470

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 32  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 91

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 92  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 150

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 151 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 210

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 211 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 270

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 271 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 328

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 329 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 388

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 389 D-RLTVARARKIERFLSQP 406


>gi|51599163|gb|AAU08239.1| ATP synthase alpha chain [Nonomuraea sp. ATCC 39727]
          Length = 549

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 90/448 (20%), Positives = 180/448 (40%), Gaps = 28/448 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG------GYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           +    + +    E + +    +G      G +         V+ L       + +  +  
Sbjct: 4   LTIRPDEIRDALERFVQAYEPEGAAREEIGTVVDAGDGIAHVSGL-PSAMANELLEFENG 62

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113
                G  + ++   + +  +G    I  G  V   G    +     + GRV++ LG P+
Sbjct: 63  ---TRGLALNLDTREIGVVILGEFSGIEEGQTVRRTGEVLSVPVGDNFLGRVVDPLGNPL 119

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG  ++ + +    +  + P  + RQ V++   TGI+ ID  T +  GQR  +    G G
Sbjct: 120 DGKGAI-EAEGVRALELQAPTVVQRQPVKESLATGIKAIDAMTAIGRGQRQLIIGDRGTG 178

Query: 174 K-----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVA 222
           K      T+L+        D     + +   VG++G  V +             + +V A
Sbjct: 179 KTAIAVDTILNQRENWASGDPTKQVRCVYVAVGQKGSTVAQVRARLEEAGAMEYTTIVAA 238

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            + E+   + +AP     I +++  +G +VL++ D +T+ A + R ++      P    +
Sbjct: 239 PASEAAGFKYIAPYAGSAIGQHWMYQGKHVLIVFDDLTKQADAYRAVSLLLRRPPGREAF 298

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++T +  +   G++ +  I  +V SI +G + L  
Sbjct: 299 PGDVFYLHSRLLERCAKLSDDLGGGSMTGLPVIETKGNDVSAVIPTNVISITEGQVFLET 358

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A +   +K+  +L   + ++   RD+     +   +D
Sbjct: 359 DLFNAGVRPAINVGVSVSRVGGSAQAKAMRKVAGTLRLSLSQY---RDLEAFAAFASDLD 415

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 + +   + + LKQ+     S +
Sbjct: 416 AASKAQLERGQRLVELLKQAQYSPFSLE 443


>gi|87200415|ref|YP_497672.1| F0F1 ATP synthase subunit beta [Novosphingobium aromaticivorans DSM
           12444]
 gi|118573710|sp|Q2G5N5|ATPB_NOVAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|87136096|gb|ABD26838.1| ATP synthase F1 subcomplex beta subunit [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 481

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 190/424 (44%), Gaps = 24/424 (5%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPV 75
             ++   G IS +      VT   +   +   +      +  + +V   +  + V    +
Sbjct: 2   ATVLSSTGKISQVIGAVVDVTFDGELPAILSALETDNNGNRLVLEVAQHLGENTVRTIAM 61

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + ++ G  V + G +  +       GR++N +G+PID    +G  + +  I +K P 
Sbjct: 62  DSTDGLTRGQPVTNTGAQISVPVGPKTLGRIMNVIGEPIDERGPVG-AEQTAPIHAKAPE 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
            + +        TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 121 FIEQSTEAAILVTGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSV 180

Query: 192 ISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTA 238
            + VGER RE  +   ++L   +              K  +V    +E P  R    L+ 
Sbjct: 181 FAGVGERTREGNDLYHEFLDAGVIAKDADGNPTPDGSKVALVFGQMNEPPGARARVALSG 240

Query: 239 VTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI
Sbjct: 241 LTMAEYFRDQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQLQERI 300

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +   KG+IT+V ++ V  D+  DP   +  + LD    LNR+++E G YP VDPL S 
Sbjct: 301 --TSTTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLNRAISELGIYPAVDPLDST 358

Query: 358 SRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+   A    +  +    +   + +++  +DI  I G     +      V +   I  F
Sbjct: 359 SRVLTPAVVGQEHYETARRVQETLQKYKSLQDIIAILGMDELSEED-KLTVARARKIQRF 417

Query: 417 LKQS 420
           L Q 
Sbjct: 418 LSQP 421


>gi|255717400|ref|XP_002554981.1| KLTH0F18304p [Lachancea thermotolerans]
 gi|238936364|emb|CAR24544.1| KLTH0F18304p [Lachancea thermotolerans]
          Length = 508

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/440 (25%), Positives = 194/440 (44%), Gaps = 21/440 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDI 69
           A   +       G + ++      V     Q   + + +    K    + +V   +  + 
Sbjct: 29  ARTMATQAAAAHGKVRAVIGAIVDVQFEQGQLPEILNALEIDTKQGKLVLEVSQHLGENT 88

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G+ V   G    +       GR+IN +G+PID    +     +  I
Sbjct: 89  VRTIAMDGTEGLVRGEQVVDTGAPISVPVGRETLGRIINVVGEPIDERGPILTKKRN-PI 147

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
            ++ P  + +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +    
Sbjct: 148 HAEPPAFVEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKA 207

Query: 189 KVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAV 239
               S+   VGER RE  +   +         +   K  +V    +E P  R    LT +
Sbjct: 208 HGGFSVFTGVGERTREGNDLYREMRETGVINLEGDSKVALVFGQMNEPPGARARVALTGL 267

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI 
Sbjct: 268 TIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI- 326

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S S
Sbjct: 327 -TTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKS 385

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           RL D +    +   + + +   +  ++  +DI  I G     +      V +   I  FL
Sbjct: 386 RLLDASVVGQEHYDVATQVQQTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFL 444

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q     +  +VF  I  +L
Sbjct: 445 SQP---FAVAEVFTGIPGRL 461


>gi|183206648|gb|ACC54522.1| ATP synthase beta subunit [Campanula fragilis]
          Length = 461

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIR--------INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I         +  + V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTLGQPINVICEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|170759729|ref|YP_001785485.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A3 str. Loch
           Maree]
 gi|190358659|sp|B1KSS8|ATPB_CLOBM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169406718|gb|ACA55129.1| ATP synthase F1, beta subunit [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 463

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106
           +     +   + +V   I  D +    +   E +  G      G+   +       GR+ 
Sbjct: 31  LEINAGDRKVIAEVEQHIGDDTIRAIAMEDTEGLKRGMEALDTGKSVSVPVGKEVLGRLF 90

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LGKPIDG       + S  I    P    +    + F+TGI+VID+  P   G +IG+
Sbjct: 91  NVLGKPIDGAGEFI-SEESYPIHRSAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGL 149

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+ L+     +   +     + + VGER RE  +   +     + +K+ +V  
Sbjct: 150 FGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEKTALVFG 209

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T++EYF  +G +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 210 QMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 269

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+RS+
Sbjct: 270 QPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSI 327

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E G YP VDPL S SR+ D      +  ++   + +++ R+ E +DI  I G     + 
Sbjct: 328 TELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAILGIDELSEE 387

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 388 D-KLVVGRARKIQRFLSQP 405


>gi|220913729|ref|YP_002489038.1| ATPase, FliI/YscN family [Arthrobacter chlorophenolicus A6]
 gi|219860607|gb|ACL40949.1| ATPase, FliI/YscN family [Arthrobacter chlorophenolicus A6]
          Length = 446

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 172/418 (41%), Positives = 244/418 (58%), Gaps = 9/418 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G ++++  +   V  L   V  GD +   GK      +V+      +   P+G    +
Sbjct: 23  RTGTVTAVLGLGLEVAGLDCAV--GDLITV-GKPPGLDAEVVASVSGGLRCMPLGRLTGV 79

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + GD     G+   +       GRV++ LG+PIDG   L  G   +   ++ P AM+R R
Sbjct: 80  AAGDPARSKGKPLMVPTGTGLFGRVLDGLGRPIDGKGPLVTG-RHVPADNESPSAMHRAR 138

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           VE    TG+RV+D    L  GQR+G+FAGSG+GKS+LLSM AR    +  +I+LVGERGR
Sbjct: 139 VEAPLHTGVRVLDTMATLGRGQRMGLFAGSGVGKSSLLSMVARGTDAEVSVIALVGERGR 198

Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EVREF+ED LG + L +SVVVVATSDE  ++R    +TA  IAE F   G +V+L++DS+
Sbjct: 199 EVREFLEDDLGAEGLARSVVVVATSDEPALMRLRCAVTATRIAESFREAGRDVVLMMDSL 258

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR A + REI  ++GE P  RGYP S FS L RLLER G +E   G++T + +VLVDGD+
Sbjct: 259 TRVAMAQREIGLSAGEPPATRGYPPSTFSLLARLLERAGTAET--GSVTGIYTVLVDGDD 316

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
           HN+PIAD+ RSILDGH+VL+R LA  G +P VD L SVSR+A K  +     + + L   
Sbjct: 317 HNEPIADAARSILDGHVVLDRKLAVAGHFPSVDVLGSVSRVASKVNAPGNTAVAAVLRKT 376

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEITKK 436
           +      +D+  +G Y  G + ++D A+     I  FL+Q   D +   D +Q +T  
Sbjct: 377 LAARRNAQDLIDVGAYHRGTNPLVDAALDNEAAINSFLQQRMDDSTPHRDSWQALTAL 434


>gi|37721023|gb|AAN32514.1| ATP synthase beta subunit [Muscari comosum]
          Length = 494

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+  G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLXPYRRGGKIGLXGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|13236798|gb|AAK14704.1| ATP synthase beta subunit [Beccariophoenix madagascariensis]
          Length = 494

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|158602297|gb|ABW74615.1| ATP synthase beta subunit [Trautvetteria caroliniensis]
          Length = 490

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|155029287|dbj|BAF75524.1| ATP synthase beta subunit [Neoscortechinia forbesii]
          Length = 489

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|94495684|ref|ZP_01302264.1| ATP synthase F1, beta subunit [Sphingomonas sp. SKA58]
 gi|94425072|gb|EAT10093.1| ATP synthase F1, beta subunit [Sphingomonas sp. SKA58]
          Length = 481

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 113/434 (26%), Positives = 195/434 (44%), Gaps = 27/434 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      VT       +   +         + +V   +  + V    +   + ++
Sbjct: 8   GRISQVIGAVVDVTFPDALPAILSALETSNNGQRLVLEVAQHLGENTVRTIAMDSTDGLT 67

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G +  +       GR++N +G+PID    + + +L   I +K P  +++   
Sbjct: 68  RGQEVTDTGAQISVPVGPATLGRILNVVGEPIDERGPV-QTELRSPIHAKAPEFIDQSTD 126

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 127 ASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGER 186

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   ++L  N+              K  +V    +E P  R    L+ +TIAEYF
Sbjct: 187 TREGNDLYHEFLDANVIAKDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYF 246

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
              +  +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 247 RDVENQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTNK 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SR+ +  
Sbjct: 305 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPR 364

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +  +   ++  ++ +++  +DI  I G     +      V +   I  FL Q    
Sbjct: 365 VVGQEHYETARAVQSILQKYKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP--- 420

Query: 424 LSSEDVFQEITKKL 437
               +VF  I+ K 
Sbjct: 421 FHVAEVFTGISGKF 434


>gi|7708542|emb|CAB90093.1| ATP synthase beta subunit [Pittosporum fairchildii]
          Length = 474

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 19  IVPVLDVAFSTGKMANIYNALVVKGQ--DTVGQPINVACEVQQLLGNNRVRAVAMSATDG 76

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +  +
Sbjct: 77  LTRGMEVVDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLE 135

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 136 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 195

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 196 ERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 255

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 256 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 313

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 314 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 373

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 EEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|27904519|ref|NP_777645.1| F0F1 ATP synthase subunit alpha [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|32171342|sp|Q89B41|ATPA_BUCBP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|27903916|gb|AAO26750.1| ATP synthase subunit alpha [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 514

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 99/443 (22%), Positives = 187/443 (42%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ +   + +L         +       G + S++     +  LS  V  G+ +   G  
Sbjct: 1   MQISSSEICELISKKIAKFDIISSMHNEGRVISVSDGIIQIYGLSD-VMQGEMLSLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            D     + +  ++V    +G    I+ G  +   GR   I   + + GRVINALG PID
Sbjct: 58  -DKYAIALNLEKNVVGAIVMGEYTHITEGTKIISTGRIFEIPVGSKFLGRVINALGVPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +    + +    P  ++RQ++ +  +TG + ID   P+  GQR  +      GK
Sbjct: 117 GKGRIQEEKF-LPVEINAPGVIDRQKISEPLQTGYKSIDAMVPIGKGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           ++L      +  +   K I   +G++   +   +        L  ++V+VA++ ES  L+
Sbjct: 176 TSLAIDTIINQRNTKIKCIYVAIGQKFSTIVNLVRQLEDNQALNHTIVIVASASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            + P +  ++ E+F  +G + L++ D +++ A + R+I+      P    +P  +F    
Sbjct: 236 YLVPYSGCSLGEFFRDQGKDALIVYDDLSKHAIAYRQISLLLRRPPGREAFPGDIFYLHA 295

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                     G++TA+  +     + +  I  +V SI DG I L
Sbjct: 296 RLLERACRVNSNYLKNILGTVNKFSTGSLTALPIIETQDGDVSSFIPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P ++P  SVSR+   A     +KL S +   + ++   +++     +   
Sbjct: 356 ESNLFNSGIRPAINPGISVSRVGGAAQCQIIRKLSSGIRTSLAQY---QELIAFSQFSSE 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D I    +     + + LKQ  
Sbjct: 413 LDEITRNQLIHGKKLIEILKQKQ 435


>gi|313141730|ref|ZP_07803923.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT
           98-5491]
 gi|313130761|gb|EFR48378.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT
           98-5491]
          Length = 467

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 194/409 (47%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I  +      +   S    + + +       G++   + +V     D  V    + + 
Sbjct: 3   GKIVQVMGPVVDIDFESYLPAINEALDIDFSIDGQSRKLVLEVAAHIGDNRVRAIAMDMT 62

Query: 79  EEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G+ V        +       GR+ N  G  IDG ++L   +    I  + P   N
Sbjct: 63  EGLTRGEKVVARGNPIMVPVGEQVLGRIFNVTGDVIDGGEALNNPE-KWSIHREAPTFEN 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      D  +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYR 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + +S+  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 VATSVQQVLQKYKDLQDIIAILGMDELSEED-KKVVERARKIEKFLSQP 407


>gi|299531258|ref|ZP_07044668.1| flagellar protein export ATPase FliI [Comamonas testosteroni S44]
 gi|298720665|gb|EFI61612.1| flagellar protein export ATPase FliI [Comamonas testosteroni S44]
          Length = 462

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 160/463 (34%), Positives = 249/463 (53%), Gaps = 28/463 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDN 58
           M    + ++Q    Y++ + ++  G ++ +T +    + L   V +G    +HQ      
Sbjct: 1   MNPWQQFMSQARARYAEPVPLECQGRLTRLTGMVLEASGL--RVPVGAQCHIHQHGQEPV 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---------------------WGRFRISP 97
           L +V+    +  ++ P G  + +S G +V                        G  R+  
Sbjct: 59  LAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVMETEKVSQTVGVLRLPM 118

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
                GRV+++ G P+D    LG   +   +      AM+R  V +   TG++ ++    
Sbjct: 119 GDGLLGRVVDSQGIPLDHAGELGSV-VPEVLDRNPINAMDRDPVRESLDTGVKALNALLT 177

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKK 216
           +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED LG  +  +
Sbjct: 178 VGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGAQDRSR 237

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + REIA   GE 
Sbjct: 238 AVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEP 297

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGH+
Sbjct: 298 PATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADAARAILDGHV 357

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R+LAE G YP +D   S SR+     S +  +L      +  R+++ RD+  +G Y 
Sbjct: 358 VLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKGRDLVQVGAYV 417

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
           PG D  LD+A+   P +  FL+QS  + SS E     + + +Q
Sbjct: 418 PGSDPQLDEAIALQPAMTGFLQQSMFESSSMEQSLAGMAQAMQ 460


>gi|110915570|gb|ABH02573.1| ATP synthase beta subunit [Aira caryophyllea]
          Length = 499

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 169/382 (44%), Gaps = 19/382 (4%)

Query: 54  KNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGK 111
           K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+
Sbjct: 58  KQHNVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGE 117

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G
Sbjct: 118 PVDNLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAG 176

Query: 172 IGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVV 220
           +GK+ L+     +       +S+ G   ER RE  +   +               K  +V
Sbjct: 177 VGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALV 236

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVA 279
               +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A
Sbjct: 237 YGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSA 296

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            GY  ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+
Sbjct: 297 VGYQPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLS 354

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G    
Sbjct: 355 RGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDEL 414

Query: 399 VDLILDKAVHQVPIIYDFLKQS 420
            +      V +   I  FL Q 
Sbjct: 415 SEED-RLTVARARKIERFLSQP 435


>gi|111283615|gb|ABH09179.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 356

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 19/356 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKELNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 176

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREV 352


>gi|16943765|emb|CAD10774.1| atp synthase, beta subunit [Lanaria lanata]
          Length = 498

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3929533|gb|AAC79944.1| ATP synthase beta subunit [Zanthoxylum monophyllum]
          Length = 413

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|113910902|gb|ABI48183.1| ATPase beta subunit [Hypnum imponens]
          Length = 465

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|14718179|gb|AAK72828.1| ATP synthase beta subunit [Photinia x fraseri]
          Length = 479

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDAVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLKRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +     ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFXGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL + +I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIXNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLXVARARKIERFLSQP 423


>gi|142006|gb|AAA21993.1| ATPase beta-subunit [Anabaena sp.]
          Length = 471

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 107/409 (26%), Positives = 187/409 (45%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V   +  +  + + +  +G N    GQ + + +++        +    
Sbjct: 11  GYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEA--GQQLNLTVEVQQLLGDNQIRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +   + ++ I    P
Sbjct: 69  MSSTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +       +S
Sbjct: 128 KLTELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVS 187

Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
           +    G   RE  + Y      K+ +V    +E P  R    L+ +T+AEYF      +V
Sbjct: 188 VFAGVGERTREGNDLYNEMIDSKNALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDV 247

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +   +G+IT++ +
Sbjct: 248 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTTEGSITSIQA 305

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK- 371
           V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +       DE   
Sbjct: 306 VYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYN 365

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 TARAVQSTLQRYKELQDIIAILGLDELSEED-RLLVARARKVERFLSQP 413


>gi|62085165|gb|AAX62987.1| ATP synthase beta subunit [Neoscortechinia kingii]
          Length = 482

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQEINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|305671625|gb|ADM63122.1| ATP synthase beta subunit [Hydrocotyle vulgaris]
          Length = 464

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 20  KGRDTVGQQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 79

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D   S+     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 80  IFNVLGEPVDNLGSVDTHTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 138

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 139 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 198

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 199 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 258

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 259 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 316

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 317 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 376

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 377 ILGLDELSEED-RLTVARARKIERFLSQP 404


>gi|229193557|ref|ZP_04320501.1| ATP synthase subunit beta [Bacillus cereus ATCC 10876]
 gi|228589862|gb|EEK47737.1| ATP synthase subunit beta [Bacillus cereus ATCC 10876]
          Length = 459

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 39  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKPISVPVGDVTLGRVFNVLGDAIDLDGEVP 98

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 99  ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 158

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 159 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 218

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 219 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 278

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 279 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 336

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 337 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 395

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 396 FFLSQN 401


>gi|183206618|gb|ACC54507.1| ATP synthase beta subunit [Siphocodon spartioides]
          Length = 443

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 5   KGRDTLGQPINVTCEVQQLLGNNRVRAVSMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 65  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 124 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 183

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 184 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 244 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 302 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYKELQDIIT 361

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 362 ILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|219552190|gb|ACL26810.1| ATP synthase beta chain [Glochidion acuminatum]
          Length = 423

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGRMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|119368190|dbj|BAF40438.1| ATP synthase beta subunit [Trigonia boliviana]
          Length = 486

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKLPNIYNALVVKG--RDAVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|111283609|gb|ABH09176.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 356

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 19/356 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 176

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREV 352


>gi|7708622|emb|CAB89979.1| ATP synthase beta subunit [Rourea minor]
          Length = 471

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 48  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPXSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFXXLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|75332460|sp|Q95AD6|ATPB_WHIBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|16943759|emb|CAD10770.1| atp synthase, beta subunit [Whiteheadia bifolia]
          Length = 498

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISS-ITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+  I  V   V  L +     + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQLIGPVLDVVFPLGKMPNNYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRALAMS 80

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|32815649|gb|AAP88221.1| ATP synthase beta subunit [Engelhardia fenzelii]
          Length = 457

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTTGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVLDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|66276261|gb|AAY44145.1| ATP synthase beta subunit [Coccinia sessilifolia]
          Length = 479

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DIAGQEINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVVDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|56697994|ref|YP_168365.1| F0F1 ATP synthase subunit beta [Ruegeria pomeroyi DSS-3]
 gi|81819934|sp|Q5LNP1|ATPB_SILPO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56679731|gb|AAV96397.1| ATP synthase F1, beta subunit [Ruegeria pomeroyi DSS-3]
          Length = 474

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 187/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V        + + +  +      + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVQFDDALPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G +V   G    +   A   GR++N +G+P+D    +   + +  I    P    +   
Sbjct: 66  RGAVVTDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATE-TRAIHQPAPSFDEQSTS 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SDILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKLENLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKAGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPQVVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|85706173|ref|ZP_01037268.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. 217]
 gi|85669337|gb|EAQ24203.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius
           sp. 217]
          Length = 444

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 159/429 (37%), Positives = 250/429 (58%), Gaps = 4/429 (0%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQVIRINLDIV 70
           AE  +   +   G +S++      ++ LS    LGD VV Q + +    G+VIR+    +
Sbjct: 6   AEISALRPMRMMGRVSAVQGSSLQISGLSAEARLGDRVVIQRRSDGALHGEVIRLEAASL 65

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            + P    + ++LGD V       ++PS  W GR+I+  G+P+DG   L   ++   + +
Sbjct: 66  VVLPDTSPDGVALGDRVILGQENSVAPSHSWLGRIIDPFGEPLDGRPLLRGANIRA-LRA 124

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P    R+ +    +TG+   +   P+  GQR+G+FAGSG+GKS LL   AR    D V
Sbjct: 125 DPPAPTRRRTLGARLETGMVAFNTVLPIVRGQRVGLFAGSGVGKSMLLGHLARHMQADVV 184

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+L+GERGRE+REF+E  LG + +++SV+V ATSD SP++R+    TA+ +AE+F  +G
Sbjct: 185 VIALIGERGRELREFVETVLGPEGMRRSVIVAATSDRSPLIRRRCAWTAMAVAEFFRDEG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
             VL + DSITRFA + RE+AT +GE+P  RG+P+S    +  L ER GP  +  G+ITA
Sbjct: 245 KQVLFLADSITRFAEAHREVATAAGEMPALRGFPSSTAHLIMSLCERAGPGAESMGDITA 304

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +++VLV G + ++PIAD +R +LDGH++L+R +AE GRYP +D L SVSR   +A S +E
Sbjct: 305 LLTVLVAGSDMDEPIADILRGVLDGHVILDRQIAERGRYPAIDLLRSVSRSLPRAASDEE 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             L++    L+  +  +  +   G Y  G D  LD+A+   P +  FL      +S ++ 
Sbjct: 365 NALIARARALLSSYSRSETMIRAGLYAEGSDPELDQAIRIWPDLDGFLA-DKEAVSVKNS 423

Query: 430 FQEITKKLQ 438
           F  +   L+
Sbjct: 424 FARLGVILR 432


>gi|296809027|ref|XP_002844852.1| ATP synthase beta chain [Arthroderma otae CBS 113480]
 gi|238844335|gb|EEQ33997.1| ATP synthase beta chain [Arthroderma otae CBS 113480]
          Length = 520

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 119/449 (26%), Positives = 192/449 (42%), Gaps = 29/449 (6%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
            L  L   Y+       G I  +      V   ++ +      +  G  +DN GQ + + 
Sbjct: 34  ALQALTARYASTNAANIGRIHQVIGAVVDVKFDTETLP----SILNGLETDNGGQKLVLE 89

Query: 67  ------LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
                   +V    +   E +  G  V   G   +I       GR++N  G PID    +
Sbjct: 90  VAQHLGERVVRTIAMDGTEGLVRGAKVTDTGLPIQIPVGPGTLGRIMNVTGDPIDERGPI 149

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            KG     I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  + 
Sbjct: 150 -KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQ 208

Query: 180 MFARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPIL 230
               +        S+   VGER RE  +   +         D   K  +V    +E P  
Sbjct: 209 ELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGA 268

Query: 231 RKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R    LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  +
Sbjct: 269 RARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVD 328

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +  + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP
Sbjct: 329 MGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYP 386

Query: 350 PVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
            VDPL S SR+ D      D     + +  ++  ++  +DI  I G     +      V 
Sbjct: 387 AVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVE 445

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   +  FL Q     +   VF  I   L
Sbjct: 446 RARKMQRFLSQP---FTVAQVFTGIEGAL 471


>gi|229175979|ref|ZP_04303475.1| ATP synthase subunit beta [Bacillus cereus MM3]
 gi|228607472|gb|EEK64798.1| ATP synthase subunit beta [Bacillus cereus MM3]
          Length = 469

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGEVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|196232471|ref|ZP_03131324.1| ATP synthase F1, alpha subunit [Chthoniobacter flavus Ellin428]
 gi|196223543|gb|EDY18060.1| ATP synthase F1, alpha subunit [Chthoniobacter flavus Ellin428]
          Length = 508

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 93/456 (20%), Positives = 173/456 (37%), Gaps = 26/456 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           M   L+ L +       +      G +  +      +  LS  V L + +   G      
Sbjct: 1   MSSILQELEKQIGGLKTSTAKSNVGIVREVGDGVAKIEGLS-GVMLNEMIEFPGG---LY 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G  + +    V    +G  + +  G  V   GR   +       GRV++ LG P+D    
Sbjct: 57  GLALNLEESEVGAILLGDEKGVVEGTEVKTTGRLLSVPVGKGLLGRVVDTLGNPVDNKGP 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +   S  +    P  + R+ V +  +TGI  ID   P+  GQR  +      GK+T+ 
Sbjct: 117 I-QATASYPVEKIAPGIIKRKSVSQPVQTGIMAIDAMIPIGRGQRELIIGDRATGKTTIA 175

Query: 179 SMFARSDCFD-------------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATS 224
                +                   I   +G++   V   I           ++++ AT+
Sbjct: 176 IDAIINQARINKANEGKPNFRPLYSIYVAIGQKQSNVARSIAVLEQAGAMQYTIIICATA 235

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
            ++   + +AP +   + E+F   G + L++ D +++ A + R+++           YP 
Sbjct: 236 SDTATNQYLAPFSGAAMGEWFMDNGMDALIVFDDLSKHAVAYRQVSLLLKRPSGREAYPG 295

Query: 285 SVFSELPRLLERIGPSEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
            VF    RLLER    +++ GN   TA+  +     + +  I  +V SI DG I L   L
Sbjct: 296 DVFYLHSRLLERSARVDEKNGNGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLETDL 355

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
             +G  P V    SVSR+   A     K++   +   + +F E   +     +   +D  
Sbjct: 356 FYQGIRPAVSVGLSVSRVGSAAQIKAVKQVAGKIKGDLAQFRE---LAAFAQFGSDLDAK 412

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
               + +   I +  KQ   +  + +V   +   +Q
Sbjct: 413 TKSMLDRGARIVELFKQVQYNPLATEVMVAVLWSMQ 448


>gi|16943761|emb|CAD10771.1| atp synthase, beta subunit [Orthrosanthus polistachus]
          Length = 498

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5001601|gb|AAD37047.1|AF092121_1 ATP synthase beta subunit [Schumacheria sp. SH1999]
          Length = 494

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V        +       GR
Sbjct: 46  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTEAPLSVPVGGATLGR 105

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 106 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 164

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 165 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIE 224

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 225 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 284

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +    L
Sbjct: 285 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPXTTFXHL 342

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 343 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 402

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 403 ILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|62902861|gb|AAY19345.1| ATP synthase beta subunit [Fagus grandifolia]
          Length = 488

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ + +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQMNVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|186886313|gb|ACC93559.1| ATPase F1 alpha subunit [Juncus trifidus]
          Length = 343

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 15/340 (4%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119
             + +  + V I   G    I  GDLV   G     P      GRV++ LG PIDG  +L
Sbjct: 1   IALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGKGAL 60

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-- 177
           G  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 61  GDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAI 119

Query: 178 --------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
                   ++   + +     +   +G++   V + ++     N    SV+V AT+ +  
Sbjct: 120 DTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDPA 179

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF 
Sbjct: 180 PLQFLAPYSGCAMGEYFRDNGMHALMIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFY 239

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G
Sbjct: 240 LHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRG 299

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
             P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 300 IRPAINVGLSVSRVGSAAQLKTMKQVCGSFKLELAQYREV 339


>gi|157285123|gb|ABV31301.1| ATPase [Vibrio neptunius]
 gi|157285135|gb|ABV31307.1| ATPase [Vibrio neptunius]
 gi|157285241|gb|ABV31360.1| ATPase [Vibrio neptunius]
          Length = 441

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|134102718|ref|YP_001108379.1| F0F1 ATP synthase subunit alpha [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007825|ref|ZP_06565798.1| F0F1 ATP synthase subunit alpha [Saccharopolyspora erythraea NRRL
           2338]
 gi|158513552|sp|A4FN29|ATPA_SACEN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|133915341|emb|CAM05454.1| ATP synthase alpha chain [Saccharopolyspora erythraea NRRL 2338]
          Length = 548

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 97/442 (21%), Positives = 176/442 (39%), Gaps = 27/442 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E Y  +   +      G ++        V  L   V   + +   G      G
Sbjct: 9   DEIRSAIEKYVSSYSPEVSREEVGVVTDTGDGIAHVEGL-PSVMTEELLEFPGG---IYG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + +    V    +G  ++I  G  V   G+   +     + GRV+N LG+PIDG   +
Sbjct: 65  VAMNLEAQEVGAVILGESDKIEEGQEVRRTGKVLSVPVGDDFLGRVVNPLGEPIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              + +  +  +    + RQ V +  +TGI+ ID  TP+  GQR  +      GK+T+  
Sbjct: 125 -TAEENRALELQAATVVQRQGVSEPMQTGIKAIDSMTPIGRGQRQLLIGDRKTGKTTVAV 183

Query: 180 MFARSDCFD----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
               +   +          + I   +G++G  +             + + +V A + +SP
Sbjct: 184 DTIINQKGNWESGDPQKQVRCIYVAIGQKGSTIAGVKRSLEEAGALEYTTIVAAPASDSP 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            L+ +AP     I +++  +G +VL++ D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GLKWLAPYAGSAIGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E G  ++T +  +    ++ +  I  +V SI DG   L   L   G
Sbjct: 304 LHSRLLERCAKLSDEMGAGSMTGLPIIETKANDVSAYIPTNVISITDGQCFLQSDLFNSG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           + P +D   SVSR+   A     +K+  SL   + +F E         +   +D      
Sbjct: 364 QRPAIDVGISVSRVGGSAQINAIRKVTGSLKIDLAQFRELE---AFSAFASDLDATSKAQ 420

Query: 407 VHQVPIIYDFLKQSPSDLSSED 428
           + +   + + LKQ   +    +
Sbjct: 421 LDRGARLMEVLKQGQGEPLPVE 442


>gi|114216038|gb|ABI54630.1| ATPase alpha subunit [Chara contraria]
          Length = 364

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 20/369 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           +      V  L++ +  G+ V     +S   G  + +  + V I   G    I  GD+V 
Sbjct: 1   VGDGIARVYGLNK-IQAGEMVEF---SSGVKGMALNLENESVGIVVFGSDTAIKEGDIVK 56

Query: 89  HWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G    +       GRV++ALG PIDG  +LG  +    +  K P  ++R+ V +  +T
Sbjct: 57  RTGSIVDVPVGRSMLGRVVDALGVPIDGKGALGAVE-RRRVEVKAPGIISRKSVHEPMQT 115

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD------KVIISLVG 196
           G++ +D   P+  GQR  +      GK      T+L+    +            +   +G
Sbjct: 116 GLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINAKGASEKEKLYCVYVAIG 175

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ++   V + ++        + S++V AT+ +   L+ +AP     + E+F   G + L+I
Sbjct: 176 QKRSTVAQLVKILSEAGALEYSIIVAATASDPAPLQFLAPYAGCAMGEFFRDNGMHALII 235

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NITAVISV 313
            D +++ + + R+++      P    +P  VF    RLLER      + G  ++TA+  +
Sbjct: 236 YDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDQAGAGSLTALPVI 295

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++ 
Sbjct: 296 ETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVC 355

Query: 374 SSLTHLIHR 382
            SL   + +
Sbjct: 356 GSLKLELAQ 364


>gi|113910770|gb|ABI48117.1| ATPase beta subunit [Blepharostoma trichophyllum]
          Length = 455

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 105/384 (27%), Positives = 173/384 (45%), Gaps = 21/384 (5%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAALSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKA-VHQVPIIYDFLKQS 420
             +   D+A V +   I  FL Q 
Sbjct: 375 LSEE--DRATVSRARKIERFLSQP 396


>gi|6467944|gb|AAF13243.1|AF197610_1 ATPase beta subunit [Orontium aquaticum]
          Length = 487

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTSTTS-PIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQKIADSKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|56461719|ref|YP_157000.1| F0F1 ATP synthase subunit beta [Idiomarina loihiensis L2TR]
 gi|81600226|sp|Q5QZI6|ATPB_IDILO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56180729|gb|AAV83451.1| F0F1-type ATP synthase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 461

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 185/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I      +      V        V +G     + +V + +   IV    +G 
Sbjct: 1   MSQGKVVQIIGAVVDLEFPQDAVPKVYDALKVTEGGLEGLVLEVQQQLGGGIVRAIAMGT 60

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G    + G    +       GR+++ LG PID    +G+ +  M I    P   
Sbjct: 61  TDGLRRGITAKNTGESIMVPVGKKTLGRIMDVLGNPIDEAGPIGEEE-KMSIHRAAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 EQSNTNELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD  +VLNR +A  G YP VDPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLNRDIASLGIYPAVDPLDSTSRQLDPQVIGDEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++ R++E +DI  I G     +     +V +   I  FL Q 
Sbjct: 358 TAMGVQEVLQRYKELKDIIAILGMDELSEED-KLSVSRARKIQRFLSQP 405


>gi|170178334|gb|ACB10586.1| ATP synthase beta subunit [Swida controversa]
          Length = 451

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|221141622|ref|ZP_03566115.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|302751984|gb|ADL66161.1| ATP synthase subunit beta, AtpB [Staphylococcus aureus subsp.
           aureus str. JKD6008]
          Length = 470

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVACDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|158602291|gb|ABW74612.1| ATP synthase beta subunit [Ranunculus trichophyllus]
          Length = 477

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|118917336|dbj|BAF40452.1| ATP synthase beta subunit [Crotonogynopsis usambarica]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        +    +   + +  G  V   G    +       GR
Sbjct: 42  KGRDTVGQEINVTCEVQQLLGNNRIRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   +  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|12004155|gb|AAG43917.1|AF213786_1 ATP synthase beta subunit [Primula cortusoides]
          Length = 464

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTXTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLXMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLLVARAEKIERFLSQP 434


>gi|62085225|gb|AAX63015.1| ATP synthase beta subunit [Gymnosporia arbutifolia]
          Length = 484

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|225420333|ref|ZP_03762636.1| hypothetical protein CLOSTASPAR_06677 [Clostridium asparagiforme
           DSM 15981]
 gi|225041019|gb|EEG51265.1| hypothetical protein CLOSTASPAR_06677 [Clostridium asparagiforme
           DSM 15981]
          Length = 467

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 190/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   +   +    + D +         + +V   I  D V    +   E +
Sbjct: 4   GKIVQVLGPVVDVLFEHNNLPDIKDALEVDNAGKRCVMEVAQHIGNDTVRCIMLASSEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   ++       GR+ N LG+ IDG DSL       EI  + P   ++  
Sbjct: 64  YRGMEVIATGSGIKVPVGDATLGRLFNVLGETIDGGDSLTDSPQ-WEIHREPPAFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 VVEMLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL 
Sbjct: 183 RSREGNDLWTEMKESGVLEKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDEEHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  + G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  +   
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEAEVVGQEHYETAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 QVQQILQKYKELQDIIAILGMEELSEED-KTTVNRARKIQRFLSQP 405


>gi|8517623|emb|CAB94372.1| ATP synthase beta subunit [Ixiolirion tataricum]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I SI   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 18  GRIXSIIGPVLDVVFPPGKMPNIYNALVVKGQ--DIVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +D+  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDMIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|7708664|emb|CAB90004.1| ATP synthase beta subunit [Stewartia pseudocamellia]
          Length = 482

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       G++ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGQIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|224830534|gb|ACN66362.1| ATP synthase beta chain [Fibraurea tinctoria]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|224830532|gb|ACN66361.1| ATP synthase beta chain [Diploclisia glaucescens]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|134095079|ref|YP_001100154.1| flagellum-specific ATP synthase [Herminiimonas arsenicoxydans]
          Length = 426

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 149/412 (36%), Positives = 218/412 (52%), Gaps = 24/412 (5%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR- 94
             +   + +G        N   +  +V+    D +++ P    E I  G  VF     + 
Sbjct: 2   EAVGLKLAVGSACTIPLANGARIEAEVVGFEDDRLFLMPQSDVEGIVPGTRVFPVEVVQS 61

Query: 95  --------------------ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                               +       GRV++  G+P+D    L     S  +  +   
Sbjct: 62  LPKPGAVSHPRRRPSDRTRHLPVGMELLGRVLDGAGRPLDSLGPLHAT-HSGPLNVRAAN 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R  +      G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L
Sbjct: 121 PLTRAPITDVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGL 180

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREV+EFIE  LG + L +SVVV A +D  P++R         IAE+F  +G +VL
Sbjct: 181 IGERGREVKEFIEQILGPEGLARSVVVAAPADTPPLMRLQGAAYTTAIAEHFRDEGKDVL 240

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           LI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G  ++  G+ITA  +V
Sbjct: 241 LIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGKEGGGSITAFYTV 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L +GD+  DPIAD+ R+ILDGHIVLNRSLAE G YP +D   S+SR      + + +K  
Sbjct: 301 LTEGDDQQDPIADAARAILDGHIVLNRSLAEAGHYPAIDIEQSISRAMHNITTPEHQKQT 360

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             L  L  R++  RD+  +G Y  G D +LD+A+     I  FL+Q  ++ S
Sbjct: 361 RKLKQLTSRYQRNRDLISVGAYSAGSDPVLDEAIALNTKIESFLQQDITERS 412


>gi|113910838|gb|ABI48151.1| ATPase beta subunit [Andreaea rothii]
          Length = 456

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMZVIDTGAPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVD-VSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGXGERTREGNDLYMEMKESKVIDEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+    ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLGTEMGTSQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|24939899|emb|CAD43365.1| ATP synthase beta subunit [Antiphytum hintoniorum]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVVDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAQAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|14718254|gb|AAK72865.1| ATP synthase beta subunit [Trigonia nivea]
          Length = 455

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLD--------IVYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  +         V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKLPNIYNALVVKG--RDAVGQQINVTCEXQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L  RI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQXRI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|21633303|gb|AAM52126.1| ATP synthase beta subunit [Merremia vitifolia]
          Length = 486

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 17  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 76

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 77  DGLMRGMGVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 136 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 195

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 196 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 255

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 256 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 314 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 373

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|83944756|ref|ZP_00957122.1| ATP synthase subunit B [Oceanicaulis alexandrii HTCC2633]
 gi|83851538|gb|EAP89393.1| ATP synthase subunit B [Oceanicaulis alexandrii HTCC2633]
          Length = 479

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 106/423 (25%), Positives = 186/423 (43%), Gaps = 25/423 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEIS 82
           G I+ +T     V        + + +  +  +   + +V   +  ++V    +   E + 
Sbjct: 6   GRIAQVTGAVVDVEFEGGLPDILNALETKNGDQKLVLEVASHLGENMVRTIAMDATEGLK 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+++  G+PID    +    +   I    P    +   
Sbjct: 66  RGSEVTDTGSPIMVPVGPGTLGRIMSVTGEPIDEAGDVQAA-MMAPIHRPAPAFEEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 AEILPTGIKVVDLLCPYAKGGKIGLFGGAGVGKTVLIQELINNIAKLFGGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK-------------SVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   + +   + K               +V    +E P  R    L+ +  AEYF
Sbjct: 185 TREGNDLYYEMIESGVNKDPKENGGSAEGSRCALVFGQMNEPPGARARVALSGLAQAEYF 244

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +K
Sbjct: 245 RDEEGKDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTKK 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VLNRS+AE+G YP VDPL S SR+ +  
Sbjct: 303 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRILEPR 362

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +  +    +  ++ R++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 363 IVGEEHYQTARRVQEILQRYKALQDIIAILGMDELSEED-KLVVARARKIERFLSQ-PFD 420

Query: 424 LSS 426
           ++ 
Sbjct: 421 VAE 423


>gi|260770079|ref|ZP_05879012.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|260615417|gb|EEX40603.1| ATP synthase beta chain [Vibrio furnissii CIP 102972]
 gi|315182596|gb|ADT89509.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218]
          Length = 460

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/405 (27%), Positives = 184/405 (45%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G I  +      V    +Q   + D +   G NS  + +V + +   IV    +G  + +
Sbjct: 4   GKIVKVIGAVVDVEFEQNQGPKVYDALKVVGGNSSLVLEVQQQMGGGIVRCIAMGSSDGL 63

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G       G   +       GR++N LG PID    +G+ +    I    P    +  
Sbjct: 64  KRGIQCETTGGPITVPVGEKTLGRIMNVLGDPIDECGPIGE-ETKYGIHRAAPSYEEQAN 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
                +TGI+VID+  P   G +IG+F G+G+GK+  +     +         + + VGE
Sbjct: 123 STALLETGIKVIDLICPFSKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +F  +     +  K  +V    +E P  R    LT +TIAE F  +G +VLL +
Sbjct: 183 RTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFV 242

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V 
Sbjct: 243 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVP 300

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSS 375
            D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   +   
Sbjct: 301 ADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPQIVGQEHYDVAQR 360

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 361 VQMTLQRYKELKDIIAILGMDELSEED-KRLVSRARKVERFLTQP 404


>gi|197103703|ref|YP_002129080.1| ATP synthase F1, beta subunit atpD [Phenylobacterium zucineum HLK1]
 gi|196477123|gb|ACG76651.1| ATP synthase F1, beta subunit atpD [Phenylobacterium zucineum HLK1]
          Length = 511

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 107/427 (25%), Positives = 181/427 (42%), Gaps = 32/427 (7%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ----VIR----INLDIVYI 72
           V  G I  +      V        + + +     +    GQ    V+     +  + V  
Sbjct: 30  VATGKIVQVIGAVVDVEFEGHLPAIMNALETSNTDQRT-GQPFRLVLEVAQHLGENTVRT 88

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E ++ G  V   G    +       GR++N +G+PID    +   + +  I  +
Sbjct: 89  IAMDTTEGLTRGQPVTDTGASISVPVGPATLGRIMNVIGEPIDEAGPIKTTEYA-PIHRE 147

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P    +    +   TGI+VID+  P   G +IG+F G+G+GK+  +     +       
Sbjct: 148 APSFAEQSTSAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGG 207

Query: 192 ISL---VGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAP 235
            S+   VGER RE  +   + +  N+              K  +V    +E P  R    
Sbjct: 208 YSVLAGVGERTREGNDLYHEMIESNVNVDPKKNNGSTEGSKCALVYGQMNEPPGARARVA 267

Query: 236 LTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LT +T AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 268 LTGLTQAEYFRDVEGKDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQ 327

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R +A +  +P VDPL
Sbjct: 328 ERI--TSTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPL 385

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D      +  ++      ++ +++  +DI  I G     +      V +   I
Sbjct: 386 DSTSRIMDPLVIGEEHYQVARRTQEILQQYKALKDIIAILGMDELSEED-KLTVARARKI 444

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 445 QRFLSQP 451


>gi|195064082|ref|XP_001996493.1| GH23965 [Drosophila grimshawi]
 gi|193892039|gb|EDV90905.1| GH23965 [Drosophila grimshawi]
          Length = 506

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/426 (26%), Positives = 192/426 (45%), Gaps = 21/426 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLG 84
           I ++      V        + + +    ++   + +V   +  + V    +   E +  G
Sbjct: 41  IVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRG 100

Query: 85  DLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
             V   G   RI   A   GR+IN +G+PID    +   D +  I ++ P  +     ++
Sbjct: 101 QKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSVEQE 159

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200
              TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER R
Sbjct: 160 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 219

Query: 201 EVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           E  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +V
Sbjct: 220 EGNDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDV 279

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +
Sbjct: 280 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQA 337

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   
Sbjct: 338 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYN 397

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +VF 
Sbjct: 398 VARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEVFT 453

Query: 432 EITKKL 437
               KL
Sbjct: 454 GHAGKL 459


>gi|155029351|dbj|BAF75559.1| ATP synthase beta subunit [Micrandropsis scleroxylon]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNTLVVKG--RDTAGQEINVTCEVQKLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLNTKLSIFETGIKVVDLLAPYRRGGKTGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|124361736|gb|ABN09310.1| ATP synthase beta subunit [Diospyros ropourea]
          Length = 459

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|37720985|gb|AAN32495.1| ATP synthase beta subunit [Coelogyne cristata]
          Length = 499

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 23  GRIAQIIGPVLDVIFPPGKMPNIYNALVIQG--RDTVGQQINVTCEVQQLLGNNRVRTVA 80

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 81  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVN-TRTTSPIHRSAP 139

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 140 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 199

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 200 VFGGVGERTREGNDLYMEMKESGVINEKDIAESKVALVYGQMNEPPGARMRVGLTALTMA 259

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I  F  +  E++     +P A GY  ++ +E+  L ERI  + 
Sbjct: 260 EYFRDVNEQDVLLFIDNIFXFVQAGSEVSALLXRMPSAVGYQPTLSTEMGSLQERI--TS 317

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 318 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 377

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 436


>gi|7708306|emb|CAB90080.1| ATP synthase beta subunit [Fuchsia procumbens]
          Length = 456

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 17  GRDTVGQEINVACEVQQLLGNNRVRALAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRI 76

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 77  FNVLGEPVDELGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 135

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 136 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 195

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 196 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 255

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 256 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 313

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 314 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAI 373

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 374 LGLDELSEED-RLTVARARKIERFLSQP 400


>gi|4063542|gb|AAC98329.1| ATP synthase beta subunit [Cupaniopsis anacardioides]
          Length = 456

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           +  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  RGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|300721114|ref|YP_003710382.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297627599|emb|CBJ88118.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 460

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 185/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   IV    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDSVPKVYDALEVKNGEEKLVLEVQQQLGGGIVRCIAMGTS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +     V   G    +       GR++N LG PID    +G+ +    I    P    
Sbjct: 61  DGLRRHLEVTDLGHPIEVPVGKATLGRIMNVLGDPIDMKGEIGEEE-RWSIHRTAPTYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVARARKIQRFLSQP 404


>gi|157285065|gb|ABV31272.1| ATPase [Vibrio navarrensis]
          Length = 441

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  K ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALKNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNADYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + ++    + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|114107053|ref|YP_740209.1| ATP synthase CF1 beta subunit [Liriodendron tulipifera]
 gi|125987796|sp|Q9MU43|ATPB_LIRTU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|113201001|gb|ABI32516.1| ATP synthase CF1 beta subunit [Liriodendron tulipifera]
          Length = 498

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34447120|dbj|BAC84975.1| mitochondrial ATPase beta-subunit [Zygosaccharomyces rouxii]
          Length = 506

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/434 (25%), Positives = 189/434 (43%), Gaps = 25/434 (5%)

Query: 20  VVQGGYISSITSVYYTV----TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
               G + ++      V      L + +   +    QGK    + Q +    + V    +
Sbjct: 35  AASTGKVRAVIGAVVDVQFDQENLPEILNALEIERPQGKLVLEVAQHLG--ENTVRAIAM 92

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                +  G  V   G    +       GR+IN +G+PID    +   +    I ++ P 
Sbjct: 93  DGTSGLVRGAAVTDTGAPISVPVDKETLGRIINVIGEPIDEAGPINTKE-RRPIHAEPPS 151

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +++    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+
Sbjct: 152 FVDQSTNSEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSV 211

Query: 195 ---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              VGER RE  +   + +           K  +V    +E P  R    LT +T+AEYF
Sbjct: 212 FTGVGERTREGNDLYREMMETGVIDLKGDSKVALVFGQMNEPPGARARVALTGLTVAEYF 271

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VLL +D+I RF  +  E++   G +P A  Y  ++ +++  L ERI     +K
Sbjct: 272 RDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVAYQPTLSTDMGALQERIA--TTQK 329

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D  
Sbjct: 330 GSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAS 389

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   + S +   +  ++  +DI  I G     +      V +   I  FL Q    
Sbjct: 390 IVGEEHYNIASDVQMTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP--- 445

Query: 424 LSSEDVFQEITKKL 437
            ++  VF  I  KL
Sbjct: 446 FATAQVFTGIEGKL 459


>gi|44300|emb|CAA45549.1| adenosinetriphosphatase [Mycoplasma gallisepticum]
          Length = 518

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 169/432 (39%), Gaps = 18/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  NL   + L +D  K         Q GYI +I      V+ L   V L + V  +   
Sbjct: 1   MAINLNEYSLLIKDQIKKYANKIISDQKGYIITIGDGIVRVSGLDD-VLLNELVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G  + +  + V +  +    ++  G  V   G+  +        GRVI+ +G PID
Sbjct: 59  --AYGIALNLEPNSVGVVMLSDYYDLKEGSSVKRTGKVIQAPVGDGLLGRVIDPIGLPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L        I       M R+ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGELKNISGYAPIERLAYGVMQRKSVHQPLETGILAIDSMLPIGKGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        I   +G++   V +             + +V AT+ E   L 
Sbjct: 177 TTIALDTIINQKGKNVNCIYVAIGQKNSSVAQITRLLEETGAMAYTTIVSATASELAALS 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VTI E +  +G +VL++ D +++ A + R ++      P    YP  +F    
Sbjct: 237 YIAPFAGVTIGEEWMRQGKDVLIVYDDLSKHAVAYRALSLLLRRPPGREAYPGDIFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER G    E   G+ITA+  +     + +  I  +V SI DG +    SL   G+ P
Sbjct: 297 RLLERAGKLSDELGAGSITALPIIETQAGDISAYIPTNVISITDGQLFTTTSLFNSGQRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++  SL   + ++ E         +   +D      +  
Sbjct: 357 AIHVGLSVSRVGSAAQLKSIKQVSGSLKLELAQYRELD---TFSQFSSDLDAETKIVLEH 413

Query: 410 VPIIYDFLKQSP 421
              + +  KQ  
Sbjct: 414 GARVMEMFKQPQ 425


>gi|7706835|emb|CAB89987.1| ATP synthase beta subunit [Acorus calamus]
          Length = 475

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 48  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFXTGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEKIE 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       +   +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEGHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|73662090|ref|YP_300871.1| F0F1 ATP synthase subunit beta [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|118573759|sp|Q49Z50|ATPB_STAS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|72494605|dbj|BAE17926.1| F0F1-type ATP synthase beta subunit [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 470

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G  S  L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPEINNALVVDVERDEGTVSLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG  ID D+ L        I  + P   
Sbjct: 64  TDGVKRGTEVRDSGDSISVPVGDATLGRVFNVLGDTIDLDEKLDTSVKRDPIHREAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 QLSTKVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AE+F      +
Sbjct: 184 GVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEHFRDVQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D++ DP   +V + LD    L R L E G YP VDPLAS SR  D      D  
Sbjct: 302 AVFVPADDYTDPAPAAVFAHLDATTNLERKLTEMGIYPAVDPLASTSRALDPTIVGQDHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     +    + V +   I  FL Q+
Sbjct: 362 EIARDVQSTLQKYRELQDIIAILGMDELSEED-KQTVERARRIQFFLSQN 410


>gi|303245589|ref|ZP_07331872.1| ATP synthase F1, beta subunit [Desulfovibrio fructosovorans JJ]
 gi|302492852|gb|EFL52717.1| ATP synthase F1, beta subunit [Desulfovibrio fructosovorans JJ]
          Length = 470

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 194/410 (47%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS----DNLGQV-IRINLDIVYICPVGI 77
           G I  +      V     +   + + +  +  N+    D + +V   +  ++V    +  
Sbjct: 9   GKIVQVIGAVLDVEFPEGKLPSILNALEIKNPNNPHAEDLVVEVAQHLGDNVVRCIAMDS 68

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G    +       GR++N +G+P+D    + +   S+ I    PP +
Sbjct: 69  TDGLVRGMEAKDTGAPISVPVGNGTLGRILNVVGRPVDEMGPI-EATASLPIHRPAPPFV 127

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         + +
Sbjct: 128 DQSTSIELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMELINNIAKHHGGLSVFA 187

Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   ++   D L K+ +V    +E P  R    LT +T AEYF  +   +
Sbjct: 188 GVGERTREGNDLYNEFKEADILGKACLVYGQMNEPPGARSRVALTGLTCAEYFRDEEGQD 247

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V 
Sbjct: 248 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTKKGSITSVQ 305

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D     AD  
Sbjct: 306 AVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPQVLGADHY 365

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++ ++++ +DI  I G     D      V +   I  FL Q 
Sbjct: 366 GTAREVQQILQKYKDLQDIIAILGMDELSDED-KLTVSRARKIQRFLSQP 414


>gi|226941275|ref|YP_002796349.1| FliI1 [Laribacter hongkongensis HLHK9]
 gi|226716202|gb|ACO75340.1| FliI1 [Laribacter hongkongensis HLHK9]
          Length = 463

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 155/446 (34%), Positives = 231/446 (51%), Gaps = 24/446 (5%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           A      L    GY++ +T +      +   V  G +V           +V+  N D++Y
Sbjct: 17  ATAGQAVLDRPRGYLTRVTGLVMEAVGVRLPVGGGAWVTLP-DGRRIEAEVVGFNGDVLY 75

Query: 72  ICPVGIGEEISLGDLVFH------------------WGRFRISPSACWCGRVINALGKPI 113
           + PV   + +  G  V                     G  R+       GR++++LG+P+
Sbjct: 76  LMPVSSVQGLLPGAAVEPDWPVSPPVFGHAATLDAAQGGRRVPVGMKLLGRIVDSLGRPL 135

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    +   D    + +     ++R  V      G+R I+    +  GQR+G+FAGSG+G
Sbjct: 136 DEAGPVHP-DTFYPLHAAPINPLDRDPVRSSMDVGVRAINGLLTVGRGQRLGLFAGSGVG 194

Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRK 232
           KS LL M A+    D V++ L+GERGREV++FIE+ LG+  L ++VVV A +D  P++R 
Sbjct: 195 KSVLLGMMAKYTRADVVVVGLIGERGREVKDFIENILGEEGLARAVVVAAPADTPPLMRL 254

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
                A  +AEY+  +G +VLL++DS+TR+A + REIA   GE PV RGYP SVF++LP+
Sbjct: 255 HGAAYATALAEYYRDQGLDVLLLMDSVTRYAMAQREIALAIGEPPVTRGYPPSVFAKLPQ 314

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L+ER G      G+ITA  +VL +GD+  DP+ADS R+ILDGH VLNR LAE G YP +D
Sbjct: 315 LIERAGNGRAGGGSITAFYTVLSEGDDQQDPVADSSRAILDGHFVLNRRLAEAGHYPAID 374

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              S+SR+     SAD             R++   D+  +G Y  G D +LD+A+ +  +
Sbjct: 375 IEQSISRVMVDVVSADHVASARRFKQFYSRYQRNLDLISVGAYVSGADPMLDEAIRRHDM 434

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438
           +  FL Q     S    F E    L 
Sbjct: 435 MESFLIQPAHKASF---FAESVTALN 457


>gi|126739852|ref|ZP_01755543.1| F0F1 ATP synthase subunit beta [Roseobacter sp. SK209-2-6]
 gi|126719084|gb|EBA15795.1| F0F1 ATP synthase subunit beta [Roseobacter sp. SK209-2-6]
          Length = 474

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 187/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V        + + +  +    + + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVQFDDHLPAILNALNTENNGKNLVLEVSQHLGENTVRCIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V        I       GR++N +G+P+D    +   + +  I    P   ++   
Sbjct: 66  RGQEVTDTDAPISIPVGNATLGRILNVVGEPVDEKGPVNATE-TRAIHQPAPEFNDQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYWEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              + S +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYAVASDVQQILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|119368004|dbj|BAF40492.1| ATP synthase beta subunit [Stigmaphyllon diversifolium]
          Length = 486

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGSTLGR 98

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI V+D+  P   G +I
Sbjct: 99  IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGINVVDLLAPYRRGGKI 157

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 158 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 218 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 336 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 395

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 396 ILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|15705384|gb|AAL05620.1| AtpB [Carludovica palmata]
          Length = 487

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|4063540|gb|AAC98328.1| ATP synthase beta subunit [Cistus x revolii]
          Length = 456

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 185/414 (44%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V  G+  D LGQ I +  ++        V    +   + 
Sbjct: 1   IGPVLDVVFPPGKMPNIYNALVVXGQ--DTLGQQINVTCEVQQLLGNNRVRAVAMSATDG 58

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +  G  +  I +  P  +  +
Sbjct: 59  LMRGMSVIDTGTPLSVPVGGVTLGRIFNVLGEPVDNLGPVDTG-TTAPIHNSAPAFVQLE 117

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 118 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVG 177

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 178 ERTREGNDLYMEMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 237

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+I
Sbjct: 238 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 296 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVG 355

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +   + R++E +DI  + G     +      V +   +  FL Q 
Sbjct: 356 KEHYEIAQQVKQTLQRYKELQDIIAVLGLDELSEED-RLTVARARKMERFLSQP 408


>gi|11034793|gb|AAG27085.1| ATP synthase beta subunit [Saururus cernuus]
 gi|33327773|gb|AAQ09250.1| ATP synthase beta subunit [Stewartia pseudocamellia]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|305671697|gb|ADM63158.1| ATP synthase beta subunit [Azorella caespitosa]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GSITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 71  MSATDGLTRGMEVIDMGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTS-ITSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|198285477|gb|ACH85277.1| ATP synthase H+ transporting mitochondrial F1 complex beta [Salmo
           salar]
          Length = 495

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 193/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I ++      V        + + +   G+ S  + +V   +  + V    +   E + 
Sbjct: 28  GRIVAVIGAVVDVQFDEGLPPILNALEVAGRESRLVLEVAQHLGENTVRTIAMDGTEGLV 87

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   RI       GR++N +G+PID    +     +  I ++ P   +    
Sbjct: 88  RGQKVVDTGDPIRIPVGPETLGRIMNVIGEPIDERGPIS-TKQTAAIHAEAPEFTDMSVE 146

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 147 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 206

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 207 TREGNDLYHEMIESGVINLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 267 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 324

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      + 
Sbjct: 325 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEH 384

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 385 YDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLIVSRARKIQRFLSQP---FQVAEV 440

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 441 FTGHAGKL 448


>gi|110915640|gb|ABH02608.1| ATP synthase beta subunit [Hookerochloa eriopoda]
          Length = 471

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 33  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 92

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 93  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 151

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 152 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 211

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 212 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 271

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 272 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 329

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 330 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGXDELSEE 389

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 390 D-RLTVARARKIERFLSQP 407


>gi|113910768|gb|ABI48116.1| ATPase beta subunit [Riccia sorocarpa]
          Length = 456

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEINVTCEVQQLLGNNKVRAVAMSATDGMMRGMKVIDTGAPLSVPVGEVTLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPV-EATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|4063536|gb|AAC98326.1| ATP synthase beta subunit [Capparis spinosa]
          Length = 456

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDMGTPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLP 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|68139361|gb|AAY86045.1| ATP synthase beta subunit [Alisma plantago-aquatica]
          Length = 452

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + ++ +G   D  GQ I +  ++        V    +   E 
Sbjct: 1   IGPVLDVVFSPGKMPNIYNALIVKG--RDTAGQQINVTCEVQQLLGNNRVRAVAMSATEG 58

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P  +   
Sbjct: 59  LTRGMQVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAPAFIQLD 117

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 118 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 177

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 178 ERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 237

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 238 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 296 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 355

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 EEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|221078785|gb|ACL99467.1| ATP synthase beta subunit [Diospyros venosa]
          Length = 459

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|110915668|gb|ABH02622.1| ATP synthase beta subunit [Mibora minima]
          Length = 472

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 34  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 93

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 94  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 152

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 153 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 273 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 331 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 391 D-RLTVARARKIERFLSQP 408


>gi|110915694|gb|ABH02635.1| ATP synthase beta subunit [Festuca arundinacea]
          Length = 490

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQ-----GKNSDNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q      K  +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSIDTANKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  ++
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIAXTK 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K  G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 K--GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708179|emb|CAB90006.1| ATP synthase beta subunit [Buddleja auriculata]
          Length = 457

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + VV +G   D +GQ I +  ++        V    
Sbjct: 8   GRIVQIIXPVXDVAFPPGKMXNIYNAVVIKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 66  MSATDGLTRGMEVIDTGAPXSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTXPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNQQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYETAPRVKQTLQRYKELQDIIAILGLDELSEXD-RLTVARXRKIERFLSQP 421


>gi|158602293|gb|ABW74613.1| ATP synthase beta subunit [Thalictrum minus]
          Length = 479

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|126656480|ref|ZP_01727741.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110]
 gi|126622166|gb|EAZ92873.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110]
          Length = 483

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 188/421 (44%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
              G I+ +          S  +  + + +  +GKNS         +V ++  D  V   
Sbjct: 8   TSVGKITQVIGPVVDAEFPSGKLPRIYNALKVEGKNSAGNTVSVTCEVQQLLGDNQVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  +   G    +       GR+ N LG+P+D    +G  + S  I    
Sbjct: 68  AMSGTDGLVRGMEIVDTGAPISVPVGKATLGRIFNVLGEPVDEMGDVGNEETS-PIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P         K F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +        
Sbjct: 127 PKLTELSTKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGV 186

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+
Sbjct: 187 SVFAGVGERTREGNDLYNEMIESKVINPDNLSESKIALVYGQMNEPPGARMRVGLSGLTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LDG  VL+R+LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D       ++   + R++E +DI  I G     +    + V +   I  FL Q
Sbjct: 365 LQPNIVGDEHYDTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|119350527|gb|ABL63214.1| AtpB [Ourococcus multisporus]
          Length = 392

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + +  G  V   G+   +       GR+ N LG+P+D    + K + S
Sbjct: 1   DNCVRAVAMNPTDGLMRGMEVLDTGKPLSVPVGQATLGRIFNVLGEPVDELGPV-KNESS 59

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 60  LPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 119

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   +               K  +V    +E P  R   
Sbjct: 120 AKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRV 179

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 180 ALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGSL 239

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 240 QERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDP 297

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +       D        +   + R++E +DI  I G     +      V +   
Sbjct: 298 LDSTSTMLQPWIVGDKHYDCAQRVKSTLQRYKELQDIIAILGLDELSEED-RLIVARARK 356

Query: 413 IYDFLKQS 420
           I   L Q 
Sbjct: 357 IERLLSQP 364


>gi|52082891|gb|AAU26026.1| ATPase beta subunit [Cinnamosma madagascariensis]
          Length = 477

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|14718056|gb|AAK72769.1| ATP synthase beta subunit [Flagellaria indica]
          Length = 481

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +G  I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGRDTVGHQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVDTS-ATSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEKNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       D   ++   +   + R++E +DI  
Sbjct: 338 DATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|32815663|gb|AAP88228.1| ATP synthase beta subunit [Quercus multinervis]
          Length = 457

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +     +  G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVXAVAMSATXGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|291298838|ref|YP_003510116.1| ATP synthase F1 subunit alpha [Stackebrandtia nassauensis DSM
           44728]
 gi|290568058|gb|ADD41023.1| ATP synthase F1, alpha subunit [Stackebrandtia nassauensis DSM
           44728]
          Length = 545

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 89/429 (20%), Positives = 168/429 (39%), Gaps = 23/429 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +++       V  L       + +         +G    +NL  + +  +G    I
Sbjct: 30  EVGTVTTCGDGIAIVEGL-PSTMFNEILEFADG---TIGIAQNLNLRDIGVVVLGDYAGI 85

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G+   +     + GRV++ALG PID    + + + + E+  + P  M RQ 
Sbjct: 86  EEGQQVKRTGKVLSVPVGDKFLGRVVDALGNPIDELGDI-EAEATRELELQAPNVMARQS 144

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------KV 190
           V +  +TGI+ ID  T +  GQR  +      GK+ +      +   +          + 
Sbjct: 145 VFEPVETGIKAIDSMTAIGRGQRQLIIGDRKTGKTQVCIDTIINQKKNWESGDPKKQLRC 204

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   +               + +V + + +   L+ +AP T  +I +++   G
Sbjct: 205 IYVAIGQKASTIASVKGMLEAHGAMEYTTIVASPASDPAGLKYLAPYTGSSIGQHWMYGG 264

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R I+      P    +P  VF    RLLER      E   G++
Sbjct: 265 KHVLIVFDDLSKQAEAYRAISLLLRRPPGREAFPGDVFYLHSRLLERCAKLSDEMGGGSM 324

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +     + +  I  +V SI DG + L   L   G  P ++   SVSR+   A   
Sbjct: 325 TGLPIIETKAGDISQFIPTNVISITDGQVFLEEGLFNSGVRPAINVGTSVSRVGGAAQPK 384

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS-PSDLSS 426
             +K+  SL   + ++ E         +   +D      + +   + + LKQ        
Sbjct: 385 AMRKVAGSLRLDLAQYRELE---AFAAFASDLDDASLAQLGRGQRLVELLKQGVAQPYPM 441

Query: 427 EDVFQEITK 435
           E+    I  
Sbjct: 442 EEEIASIWA 450


>gi|124361720|gb|ABN09302.1| ATP synthase beta subunit [Diospyros philippinensis]
          Length = 465

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|14718224|gb|AAK72850.1| ATP synthase beta subunit [Siphonodon celastrineus]
          Length = 485

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 173/383 (45%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G   + + +V ++  +  V   P+   + +  G  V   G    +       GR+ N LG
Sbjct: 48  GHTINVICEVQQLLGNNPVRAVPMSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLG 107

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +  +     F+TGI+V+D+  P   G +IG+F G+
Sbjct: 108 EPVDNLGPVD-TRTTSPIHKSAPAFIQLETKFSIFETGIKVVDLLAPYRRGGKIGLFGGA 166

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 167 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVAL 226

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 227 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 286

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 287 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 345 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDE 404

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 405 LSEED-RLTVARARKIERFLSQP 426


>gi|7708632|emb|CAB90005.1| ATP synthase beta subunit [Salix reticulata]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 13  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTASQQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|1374715|gb|AAB02288.1| ATP synthase beta subunit [Rattus norvegicus]
          Length = 475

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 187/416 (44%), Gaps = 18/416 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
                G I ++      V        + + +  QG+ S  + +V   +    V    +  
Sbjct: 2   FRTATGQIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDG 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +
Sbjct: 62  TEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFI 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 121 EMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA 180

Query: 194 LVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            VGER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF 
Sbjct: 181 GVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFR 240

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG
Sbjct: 241 DQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKG 298

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D   
Sbjct: 299 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI 358

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 359 VGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 413


>gi|305671647|gb|ADM63133.1| ATP synthase beta subunit [Adoxa moschatellina]
          Length = 481

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYDTAQMVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|290490160|gb|ADD31487.1| ATP synthase CF1 beta subunit protein [Phoradendron serotinum]
          Length = 497

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 48  KGRDPVGQPITVTCEVQQLLGYHRVRAVAMSATDGLKRGMEVIDTGAPLSVPVGKATLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+VID+  P   G +I
Sbjct: 108 IFNVLGEPVDNLGPVN-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVIDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETSQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEDD-RLTVARARKIERFLSQP 432


>gi|224830490|gb|ACN66340.1| ATP synthase beta chain [Burasaia madagascariensis]
          Length = 489

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|156622713|dbj|BAF76337.1| ATP synthase beta subunit [Cycas revoluta]
          Length = 481

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I  I   V   V        + + ++ +GK  D  GQ I +  ++        V    
Sbjct: 8   GHIVQIIGPVLDVVFSPGNMPNILNSLIIKGK--DTAGQEINVTCEVQQLLGNNKVRAVA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 66  MSATDGLKRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-ARTTSPIHRPAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +     +         K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYVEMKESGVINEQDISGSKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPXAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGXYPAVDPLDSTSTML 362

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|124361610|gb|ABN09247.1| ATP synthase beta subunit [Diospyros artanthifolia]
 gi|124361616|gb|ABN09250.1| ATP synthase beta subunit [Diospyros bejaudii]
 gi|124361630|gb|ABN09257.1| ATP synthase beta subunit [Diospyros cavalcantei]
 gi|124361634|gb|ABN09259.1| ATP synthase beta subunit [Diospyros celebica]
 gi|124361648|gb|ABN09266.1| ATP synthase beta subunit [Diospyros dichroa]
 gi|124361662|gb|ABN09273.1| ATP synthase beta subunit [Diospyros ferruginescens var.
           ferruginescens]
 gi|124361668|gb|ABN09276.1| ATP synthase beta subunit [Diospyros fragrans]
 gi|124361704|gb|ABN09294.1| ATP synthase beta subunit [Diospyros mespiliformis]
 gi|124361732|gb|ABN09308.1| ATP synthase beta subunit [Diospyros ridleyi]
 gi|221078765|gb|ACL99457.1| ATP synthase beta subunit [Diospyros scalariformis]
          Length = 465

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910906|gb|ABI48185.1| ATPase beta subunit [Hylocomium splendens]
          Length = 472

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMELINNIAKAHGGVSVS 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVIDEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|157132308|ref|XP_001655991.1| ATP synthase beta subunit [Aedes aegypti]
 gi|108881686|gb|EAT45911.1| ATP synthase beta subunit [Aedes aegypti]
          Length = 504

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 114/426 (26%), Positives = 196/426 (46%), Gaps = 21/426 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLG 84
           + ++      V        + + +  Q + S  + +V   +  + V    +   E +  G
Sbjct: 39  VVAVIGAVVDVQFDDNLPPILNALEVQERGSRLVLEVAQHLGENTVRTIAMDGTEGLVRG 98

Query: 85  DLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
             V   G   RI   A   GR+IN +G+PID    + + +LS  I ++ P  ++    ++
Sbjct: 99  QRVLDTGSPIRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQE 157

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200
              TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER R
Sbjct: 158 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 217

Query: 201 EVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           E  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +V
Sbjct: 218 EGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDV 277

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +
Sbjct: 278 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQA 335

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   
Sbjct: 336 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYN 395

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +VF 
Sbjct: 396 IARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEVFT 451

Query: 432 EITKKL 437
               KL
Sbjct: 452 GHAGKL 457


>gi|63091825|emb|CAH58763.1| ATP synthase alpha chain [Enterococcus faecalis]
 gi|63091857|emb|CAH58779.1| ATP synthase alpha chain [Enterococcus faecalis]
 gi|63091889|emb|CAH58796.1| ATP synthase alpha chain [Enterococcus faecalis]
 gi|63091897|emb|CAH58800.1| ATP synthase alpha chain [Enterococcus faecalis]
 gi|63091917|emb|CAH58813.1| ATP synthase alpha chain [Enterococcus faecalis]
 gi|63091919|emb|CAH58814.1| ATP synthase alpha chain [Enterococcus faecalis]
 gi|63091963|emb|CAH58839.1| ATP synthase alpha chain [Enterococcus faecalis]
 gi|63091969|emb|CAH58842.1| ATP synthase alpha chain [Enterococcus faecalis]
          Length = 367

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 100/375 (26%), Positives = 155/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ V     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELVEFSNGS---YGMAQNLETNDVGIIILGDFETIREGDKVQRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+P+DG   + K D +  + +  P  M RQ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPLDGLGEI-KTDKTRPVEATAPGVMQRQSVAEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDVICIYVAIGQKESTVRNQVETLRK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              L  ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 FGALDYTIVVTAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|15425592|emb|CAC60263.1| ATP synthase beta subunit [Pseudonemacladus oppositifolius]
          Length = 482

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 115/418 (27%), Positives = 184/418 (44%), Gaps = 29/418 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 19  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTAPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYKEMKDSGVIKEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 374 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLS 430


>gi|312285251|gb|ADQ64367.1| ATP synthase beta subunit [Parabaena sagittata]
          Length = 467

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTTFPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|17066857|gb|AAF13244.2|AF197611_1 ATPase beta subunit [Berberis bealei]
          Length = 488

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      VT    +   + + +V +G+  D + Q I +  ++        V    
Sbjct: 18  GRIIQIIGPVLDVTFPPGKMPNIYNALVVKGQ--DTVAQZINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGVPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 372

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGDEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|156618911|ref|YP_001430047.1| ATP synthase CF1 beta subunit [Cuscuta gronovii]
 gi|75330427|sp|Q8MBG3|ATPB_CUSGR RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633451|gb|AAM52200.1| ATP synthase beta subunit [Cuscuta gronovii]
 gi|156555949|emb|CAM98333.1| ATP synthase CF1 beta chain [Cuscuta gronovii]
          Length = 494

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 115/416 (27%), Positives = 186/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           GYI  I      V         + + +V QG+++   +   +V ++  +  V    +   
Sbjct: 20  GYIVQIIGPVLDVAFSPGMMPSIYNALVVQGRHNQEPNVTCEVQQLLGNNRVRAVAMSDT 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +    LS  I    PP + 
Sbjct: 80  DGLMRGMEVIDTGTPISVPVGGSTLGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLK 138

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S+ G 
Sbjct: 139 LDTRLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGG 198

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 199 VGERTREGNDLYMEMKESGVINQQKLDESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 258

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 259 DVNRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 316

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +     
Sbjct: 317 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQI 376

Query: 366 SAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   K    +   + R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 377 VGEQHYKTAQRVKQTLQRYKELQDIIAILGLDELSDDD-RLTVARARKIERFLSQP 431


>gi|20091265|ref|NP_617340.1| F0F1 ATP synthase subunit alpha [Methanosarcina acetivorans C2A]
 gi|19916387|gb|AAM05820.1| H(+)-transporting ATP synthase, subunit alpha [Methanosarcina
           acetivorans C2A]
          Length = 533

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 115/427 (26%), Positives = 181/427 (42%), Gaps = 15/427 (3%)

Query: 3   KNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
                + Q+ +  +  L   + G I ++++    V+ L   V   + V   G   D  G 
Sbjct: 12  NAFNEINQVRKSSTPTLTPREVGTILTVSTDIANVSGL-PGVGYEEIVKFPG---DVFGI 67

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              ++   V +  +G    +  GD V   GR           GRVI+ LG+P+DG   + 
Sbjct: 68  AFNVDEKEVGVILLGEYSHLHAGDEVERTGRVMDVSVGESLLGRVIDPLGRPLDGKGPVI 127

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-- 178
            G   + I     P M+R  V    +TGI+VID   P+  GQR  +      GK+ +   
Sbjct: 128 SGK-RLPIERSSAPIMDRAPVTVPLQTGIKVIDALIPIGRGQRELILGDRQTGKTAIAID 186

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
           ++  + D     +   +G+R   V   +           +VVVV   ++   L  +AP  
Sbjct: 187 TILNQRDYNVLCVYCAIGQRASAVARAVATLREKGAMDYTVVVVTEGNDPSGLTYIAPYA 246

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAEYF   G +VL++ D +T  A + RE++      P    YP  +F    RLLER 
Sbjct: 247 ATSIAEYFMEAGRDVLIVYDDLTNHARAYRELSLLLRRPPGREAYPGDIFYIHSRLLERA 306

Query: 298 --GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                E   G++TA+  +  +  N +  I  ++ SI DG I L+ SL E G  P VD   
Sbjct: 307 THLLGELGGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGK 366

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  KA  A  +++  +L     +FEE         +   +D    K +     I  
Sbjct: 367 SVSRVGGKAQLAVYREVAGALKLAYSQFEELE---AFTRFGARLDENTRKIIEHGRRIRA 423

Query: 416 FLKQSPS 422
            LKQ   
Sbjct: 424 LLKQPEF 430


>gi|13508339|ref|NP_110289.1| F0F1 ATP synthase subunit alpha [Mycoplasma pneumoniae M129]
 gi|2493019|sp|Q50329|ATPA_MYCPN RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|1209764|gb|AAC43657.1| ATP synthase alpha chain [Mycoplasma pneumoniae]
 gi|1673910|gb|AAB95890.1| ATP synthase alpha chain [Mycoplasma pneumoniae M129]
          Length = 518

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 94/434 (21%), Positives = 183/434 (42%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + + +  +    + YSK     + G + S+      V+ L +   L + +  +    +  
Sbjct: 5   LNEYVALIKNEIKKYSKQIFNSEIGKVISVADGIAKVSGL-ENALLNELIEFEN---NVQ 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G  + +  + V +   G   +I  G          +        GR++NALG+P+DG   
Sbjct: 61  GIALNLEQNTVGVALFGDYSKIREGSTAKRTHNVMQTPVGDVMLGRIVNALGEPVDGRGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +   ++    P  M R+ V +  +TGI  ID   P+  GQR  +      GK+++ 
Sbjct: 121 IKAEEFD-QVEKIAPGVMTRKTVNQPLETGILTIDALFPIGKGQRELIVGDRQTGKTSIA 179

Query: 179 SMFARSDCF--DKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
                +        +   +G++   V + +      D++K + VV AT+ +   +  + P
Sbjct: 180 IDTIINQRGKDVYCVYVAMGQKNSSVAQIVHQLEVTDSMKYTTVVCATASDPASMIYLTP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T +TIAEY+  +G +VL++ D +++ A + R ++      P    +P  VF    RLLE
Sbjct: 240 FTGITIAEYWLKQGKDVLIVFDDLSKHAIAYRTLSLLLRRPPGREAFPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +E   G+ITA+  +     + +  I  +V SI DG + +  +L   G+ P +  
Sbjct: 300 RACRLNEEHGGGSITALPIIETQAGDISAYIPTNVISITDGQLFMVSNLFNSGQRPAIHV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K+   SL   + ++ E         +   +D    + + +   +
Sbjct: 360 GLSVSRVGSAAQIKAIKQQTGSLKLELAQYSELD---SFSQFGSDLDENTKQILERGKRV 416

Query: 414 YDFLKQSPSDLSSE 427
            + +KQ      S+
Sbjct: 417 MEMIKQPNGKPYSQ 430


>gi|110915614|gb|ABH02595.1| ATP synthase beta subunit [Cutandia memphitica]
          Length = 475

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 37  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 96

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               + +   +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 97  NLGPV-ESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 155

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 156 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIEESKVALVYGQ 215

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 216 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 275

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 276 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 333

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 334 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 393

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 394 D-RLTVARARKIERFLSQP 411


>gi|124361644|gb|ABN09264.1| ATP synthase beta subunit [Diospyros curranii]
          Length = 464

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910886|gb|ABI48175.1| ATPase beta subunit [Leucodon julaceus]
 gi|113910908|gb|ABI48186.1| ATPase beta subunit [Climacium americanum]
 gi|113910912|gb|ABI48188.1| ATPase beta subunit [Myurium hochstetteri]
          Length = 472

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|7708476|emb|CAB89925.1| ATP synthase beta subunit [Leea guineensis]
          Length = 491

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMXNIYNALVVKG--RDIVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|75336457|sp|Q9MRR1|ATPB_CINCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687972|emb|CAB89704.1| ATP synthase beta subunit [Cinnamomum camphora]
          Length = 498

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|330718988|ref|ZP_08313588.1| F0F1 ATP synthase subunit beta [Leuconostoc fallax KCTC 3537]
          Length = 466

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 114/425 (26%), Positives = 189/425 (44%), Gaps = 19/425 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSDNLGQV-IRINLDIVYICPV 75
           +  G +  +      V    Q   + D     V+ +G N+    +V + +   IV    +
Sbjct: 1   MSTGKVVQVIGPVVDV-AFEQGQTVPDINNALVIDKGDNTTLTVEVSLALGDGIVRTIAM 59

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G      G    +       GRV N LG P+D    +  G     I  + P 
Sbjct: 60  DSTDGLQRGMAATDTGEAISVPVGEATLGRVFNVLGNPVDNAGDIDAGVKRNPIHREAPQ 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
                   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+
Sbjct: 120 YDELTTSTEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISV 179

Query: 195 ---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
              VGER RE  +   +     +  ++ +V    +E P  R    LT +T+AE F     
Sbjct: 180 FTGVGERTREGNDMYHEMKESGVLAQTAMVYGQMNEPPGARMRVALTGLTMAENFRDNEG 239

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T+
Sbjct: 240 KDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D++ DP   +  + LD    L R+L ++G YP VDPLAS S   D      +
Sbjct: 298 IQAVYVPADDYTDPAPATTFAHLDATTNLERALTQQGIYPAVDPLASTSSALDPQIVGQE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
             ++ + +   + R+ E +DI  I G     D      V++   I  FL Q     S  +
Sbjct: 358 HYEVATEVQRTLQRYRELQDIISILGMDELSDEE-KTTVNRARRIQFFLSQP---FSVAE 413

Query: 429 VFQEI 433
            F  I
Sbjct: 414 TFTGI 418


>gi|157285129|gb|ABV31304.1| ATPase [Enterovibrio norvegicus]
 gi|157285219|gb|ABV31349.1| ATPase [Enterovibrio norvegicus]
 gi|157285227|gb|ABV31353.1| ATPase [Enterovibrio norvegicus]
 gi|157285229|gb|ABV31354.1| ATPase [Enterovibrio norvegicus]
 gi|289498331|gb|ADC99204.1| ATP synthase F1 alpha subunit [Enterovibrio norvegicus]
 gi|289498333|gb|ADC99205.1| ATP synthase F1 alpha subunit [Enterovibrio norvegicus]
 gi|289498361|gb|ADC99219.1| ATP synthase F1 alpha subunit [Enterovibrio norvegicus]
          Length = 441

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 177/418 (42%), Gaps = 27/418 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+     G+ +   G   +     + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-AMQGEMIELPG---NRFALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  + RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIARQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 AVDAMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               D LK +VVVVA++ E+  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHDALKNTVVVVASASEAAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQSELFNAGIRPAVDPGISVSRVGGSAQTKIMKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF++
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 408


>gi|119350453|gb|ABL63177.1| AtpB [Atractomorpha porcata]
          Length = 391

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 4   VRAVSMNPTDGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEPVDNMGPVN-NEETLPI 62

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 63  HRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 122

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 123 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 182

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 183 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 242

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 243 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDS 300

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       S+   + R++E +DI  I G     +      V +   I  
Sbjct: 301 TSTMLQPWIVGEKHYSCAQSIKKTLQRYKELQDIIAILGLDELSEED-RLVVTRARKIER 359

Query: 416 FLKQS 420
           FL Q 
Sbjct: 360 FLSQP 364


>gi|7688335|emb|CAB89745.1| ATP synthase beta subunit [Tetramerista sp. Coode 7925]
          Length = 477

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+N   +GQ I +  ++        V    
Sbjct: 7   GRIVQIIGPVLDVAFSPGKMPNIYNALVVKGRN--TVGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       G++ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGQIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|310815415|ref|YP_003963379.1| ATP synthase F1, beta subunit [Ketogulonicigenium vulgare Y25]
 gi|308754150|gb|ADO42079.1| ATP synthase F1, beta subunit [Ketogulonicigenium vulgare Y25]
          Length = 473

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 185/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    Q   + + +  +      + +V   +    V    +   E + 
Sbjct: 5   GKITQVIGAVVDVQFEDQLPAILNALTTENNGKKLVLEVAQHLGEGTVRTIAMDATEGLV 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    +   + +  I +  P    +   
Sbjct: 65  RGGPVEDTGAPISVPVGDATLGRILNVIGEPVDEKGPVISTE-TRPIHNTAPAFDEQSTS 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 124 SEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 183

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    LT +TIAE F     
Sbjct: 184 TREGNDLYHEMIESGVIKPDNLTESKVALVYGQMNEPPGARSRVALTGLTIAEQFRDTSG 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+
Sbjct: 244 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITS 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD    L+R+++E G YP VDPL S SRL D A    +
Sbjct: 302 VQAIYVPADDLTDPAPAATFAHLDATTTLSRAISEMGIYPAVDPLDSTSRLMDPAIVGEE 361

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              +  S+  ++ +++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 362 HYAVARSVQIILQKYKSLQDIIAILGMDELSEDD-KLTVTRARKIQRFLSQ-PFDVA 416


>gi|170516114|gb|ACB15067.1| ATPase alpha subunit [Lepidothamnus laxifolius]
          Length = 358

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 19/361 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL--GKGDLSM 126
           V I   G    I  GDLV   G    +       GRV++ALG PIDG  +L   KG    
Sbjct: 1   VGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKALLGRVVDALGVPIDGKGALQVDKGAERR 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +  
Sbjct: 61  RVEAKAPGIIERKSVHEPLQTGLKAVDSLVPIGRGQREPIIGDRQTGKTAIAIDIISNQK 120

Query: 187 ----------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     D L  ++V  AT+ +   L+ +AP
Sbjct: 121 RSHLRSGTSDSVYCVYVAIGQKRSTVAQLVQIISEADALGYTIVCAATASDPAPLQFLAP 180

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 181 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 240

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 241 RAAKRSDQSGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 300

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  SL   + ++ E   +     +   +D      +++   +
Sbjct: 301 GLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARL 357

Query: 414 Y 414
            
Sbjct: 358 T 358


>gi|238782824|ref|ZP_04626853.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
 gi|238716247|gb|EEQ08230.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970]
          Length = 424

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 155/408 (37%), Positives = 231/408 (56%), Gaps = 13/408 (3%)

Query: 37  TCLSQYVCLGDFVVHQ---GKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFH--- 89
             +   + +G   + +   G  +D +  +V+  N +I+Y+ P+   + I  G  V+    
Sbjct: 4   EAVGLKLPIGTLCIVERNRGNGTDKIESEVVGFNGEILYLMPLENVDGILPGARVYAFES 63

Query: 90  ----WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
                   ++       GRV++A  +P+DG    G       + ++    + R  ++   
Sbjct: 64  GAGITKGKQLPLGPELLGRVLDASARPLDGLPPPGCAK-HGSLFTQPVNPLLRDPIKHVL 122

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREF 205
             G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++F
Sbjct: 123 DVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDF 182

Query: 206 IEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           IE+ LG+    +SVV+ A +D SPILR    + A  IAE F  +G +VLLI+DS+TR+A 
Sbjct: 183 IENILGEEGRTRSVVIAAPADVSPILRMQGAVYATRIAEDFRDRGMDVLLIMDSLTRYAM 242

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324
           + REIA   GE P  +GYP SVF++LP L+ER G   KE G+ITA  +VL +GD+  DPI
Sbjct: 243 AQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVKEGGSITAFYTVLTEGDDQQDPI 302

Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
           ADS R+ILDGHIVL+R LAE G YP +D  AS+SR   +   A   K V S   L+  ++
Sbjct: 303 ADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIDATHYKKVQSFKQLLSSYQ 362

Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
             RD+  +G Y  G D +LDKA+   P +  FL+Q   + S  +   +
Sbjct: 363 RNRDLVSVGAYAAGSDPLLDKAIRLYPDMERFLQQVIYESSGYEEACD 410


>gi|224830542|gb|ACN66366.1| ATP synthase beta chain [Hypserpa laurina]
          Length = 482

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTQLSIFETGIKVVDLLAPYRRGGKIGLFWGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|224830536|gb|ACN66363.1| ATP synthase beta chain [Haematocarpus validus]
          Length = 489

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|157285289|gb|ABV31384.1| ATPase [Aliivibrio wodanis]
          Length = 441

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G    +  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYANLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     +   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSVYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    YP  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAYPGDVFYLHSRLLERAARVSEAYVENFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 410


>gi|124361726|gb|ABN09305.1| ATP synthase beta subunit [Diospyros pubicalyx]
          Length = 455

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|17224784|gb|AAL37113.1| ATP synthase beta subunit [Stichoneuron caudatum]
          Length = 480

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G ++ I      V      +      FVV   K  D  GQ I +  ++        V   
Sbjct: 10  GRVAQIIGPVLDVFFPPGKMPNIYNAFVV---KGRDTAGQQINVTCEVQQLLGNNRVRAV 66

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 67  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 126 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 185

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 186 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 245

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 246 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 304 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 364 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 422

Query: 420 S 420
            
Sbjct: 423 P 423


>gi|75336452|sp|Q9MRQ5|ATPB_CALFL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687966|emb|CAB89706.1| ATP synthase beta subunit [Calycanthus floridus]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758864|gb|AAD50838.1| ATP synthase beta subunit [Colocasia esculenta]
          Length = 496

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I++  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFTPGKMPNIYNALVVKG--RDTAGQQIKVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EFFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|31544508|ref|NP_853086.1| F0F1 ATP synthase subunit alpha [Mycoplasma gallisepticum str.
           R(low)]
 gi|33860131|sp|P33252|ATPA_MYCGA RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|31541353|gb|AAP56654.1| ATP synthase F1 subunit alpha [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930562|gb|ADC30501.1| ATP synthase F1 subunit alpha [Mycoplasma gallisepticum str.
           R(high)]
 gi|284931523|gb|ADC31461.1| ATP synthase F1 subunit alpha [Mycoplasma gallisepticum str. F]
          Length = 518

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 169/432 (39%), Gaps = 18/432 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M  NL   + L +D  K         Q GYI +I      V+ L   V L + V  +   
Sbjct: 1   MAINLNEYSLLIKDQIKKYANKIISDQKGYIITIGDGIVRVSGLDD-VLLNELVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G  + +  + V +  +    ++  G  V   G+  +        GRVI+ +G PID
Sbjct: 59  --AYGIALNLEPNSVGVVMLSDYYDLKEGSSVKRTGKVIQAPVGDGLLGRVIDPIGLPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   L        I       M R+ V +  +TGI  ID   P+  GQR  +      GK
Sbjct: 117 GKGELKNISGYAPIERLAYGVMQRKSVHQPLETGILAIDSMLPIGKGQRELIIGDRQTGK 176

Query: 175 STLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+      +        I   +G++   V +             + +V AT+ E   L 
Sbjct: 177 TTIALDTIINQKGKNVNCIYVAIGQKNSSVAQITRLLEETGAMAYTTIVSATASELAALS 236

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP   VTI E +  +G +VL++ D +++ A + R ++      P    YP  +F    
Sbjct: 237 YIAPFAGVTIGEEWMRQGKDVLIVYDDLSKHAVAYRALSLLLRRPPGREAYPGDIFYLHS 296

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER G    E   G+ITA+  +     + +  I  +V SI DG +    SL   G+ P
Sbjct: 297 RLLERAGKLSDELGAGSITALPIIETQAGDISAYIPTNVISITDGQLFTTTSLFNSGQRP 356

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +    SVSR+   A     K++  SL   + ++ E         +   +D      +  
Sbjct: 357 AIHVGLSVSRVGSAAQLKSIKQVSGSLKLELAQYRELD---TFSQFSSDLDAETKIVLEH 413

Query: 410 VPIIYDFLKQSP 421
              + +  KQ  
Sbjct: 414 GARVMEMFKQPQ 425


>gi|34582314|sp|Q8MBF7|ATPB_MONCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633463|gb|AAM52206.1| ATP synthase beta subunit [Montinia caryophyllacea]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D+ GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDSAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDMGAAISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6467943|gb|AAF13242.1|AF197609_1 ATPase beta subunit [Thottea tomentosa]
          Length = 493

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D LGQ IR+  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTLGQQIRVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|62902835|gb|AAY19332.1| ATP synthase beta subunit [Perrottetia ovata]
          Length = 479

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIXKSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|1168571|sp|P42468|ATPB_BURCE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|587502|emb|CAA54204.1| ATPase beta-subunit [Burkholderia cepacia]
          Length = 463

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 188/411 (45%), Gaps = 12/411 (2%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           S   +V+G  +  I +V            + D ++  G       Q  ++   +V    +
Sbjct: 2   STAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQ-QQLGDGVVRTICL 60

Query: 76  GIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V +      +       GR+++ LG+PID    + + + +  I  K P 
Sbjct: 61  GASDGLRRGLTVKNTSKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPA 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     +
Sbjct: 120 FDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSV 179

Query: 192 ISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G 
Sbjct: 180 FAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRV-LTGLTMAEHFRDEGL 238

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V
Sbjct: 239 DVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKKGSITSV 296

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  D      + 
Sbjct: 297 QAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEH 356

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   + R++E RDI  I G           +V +   I  FL Q 
Sbjct: 357 YSITRRVQQTLQRYKELRDIIAILGMDELS-PEDKLSVARARKIQRFLSQP 406


>gi|297157188|gb|ADI06900.1| F0F1 ATP synthase subunit alpha [Streptomyces bingchenggensis
           BCW-1]
          Length = 523

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 90/447 (20%), Positives = 173/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQAYKPDAASREEVGTVTVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAVVLGEFSGIEEGQQVQRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDPKKQVRCIYVAIGQKGSTIAGVRAALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G+  +T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGSGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + +F E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSPS-DLSSEDVFQEITK 435
              + + LKQ+     ++ED    I  
Sbjct: 425 GSRMVELLKQTQYAPYATEDQVVSIWA 451


>gi|224830550|gb|ACN66370.1| ATP synthase beta chain [Menispermum dauricum]
          Length = 442

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 182/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 15  IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 72

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+ N LG+P+D    +     S  I    P  +   
Sbjct: 73  LMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSSTTS-PIHRSAPAFIQLD 131

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 132 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 191

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 192 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 251

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 252 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 309

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 310 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 369

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|42559024|gb|AAS20198.1| ATP synthase beta subunit [Flagellaria indica]
          Length = 479

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V   S  +       VV   K  D +G  I +  ++        V   
Sbjct: 4   GSIIQIIGPVLDVNFPSGKLPNIYNALVV---KGRDTVGHQINVTCEVQQLLGNNRVRAV 60

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 61  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATSPIHRSA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 120 PAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 179

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 180 SVFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 239

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 240 AEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 298 STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTM 357

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 358 LQPRIVGDEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 416

Query: 420 S 420
            
Sbjct: 417 P 417


>gi|63091793|emb|CAH58747.1| ATP synthase alpha chain [Enterococcus durans]
 gi|63091819|emb|CAH58760.1| ATP synthase alpha chain [Enterococcus durans]
 gi|63091893|emb|CAH58798.1| ATP synthase alpha chain [Enterococcus durans]
 gi|63091939|emb|CAH58827.1| ATP synthase alpha chain [Enterococcus durans]
 gi|63091941|emb|CAH58828.1| ATP synthase alpha chain [Enterococcus durans]
          Length = 367

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGEI-ATDKARPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTILNQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|7687970|emb|CAB89705.1| ATP synthase beta subunit [Cinnamodendron ekmanii]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|326693459|ref|ZP_08230464.1| F0F1 ATP synthase subunit beta [Leuconostoc argentinum KCTC 3773]
          Length = 466

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/424 (26%), Positives = 188/424 (44%), Gaps = 17/424 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV--CLGDFVVHQGKNSDNLG-QV-IRINLDIVYICPVG 76
           +  G +  +      V      V   + + +     N   L  +V + +   +V    + 
Sbjct: 1   MSTGKVVQVIGPVVDVAFEPGDVIPEINNALKIDKGNGQTLTVEVSLALGDGVVRTIAMD 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G   ++       GRV N LG+P+D +  +        I    P  
Sbjct: 61  STDGLQRGMSVTDTGAAIQVPVGDATLGRVFNVLGEPVDNNGPVAPDTPRHSIHRAAPKY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+ 
Sbjct: 121 DELASSTEILETGIKVIDLLAPYIRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     +  ++ +V    +E P  R    LT +T+AE F      
Sbjct: 181 TGVGERTREGNDMYHEMAESGVLSQTAMVYGQMNEPPGARMRVALTGLTMAESFRDNEGK 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D++ DP   +  + LD    L RSL ++G YP VDPLAS S   D      + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLASTSSALDPQVVGQEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++ + +   + R+ E +DI  I G     D      V++   I  FL Q     S  + 
Sbjct: 359 YEVATEVQRTLQRYRELQDIISILGMDELSDEE-KTTVNRARRIQFFLSQP---FSVAET 414

Query: 430 FQEI 433
           F  I
Sbjct: 415 FTGI 418


>gi|270313029|gb|ACZ73596.1| ATP synthase beta subunit [Cneorum tricoccon]
          Length = 470

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KXRDTVGQPINVTCEVQQLLGNNRVRAV 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 59  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 118 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 177

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 178 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMXVGLTALTM 237

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 238 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 295

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+ T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 296 STKEGSXTSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 355

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 356 LQPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 414

Query: 420 S 420
            
Sbjct: 415 P 415


>gi|157285215|gb|ABV31347.1| ATPase [Vibrio hepatarius]
          Length = 441

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 172/420 (40%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +      +  +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQRNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|124361784|gb|ABN09334.1| ATP synthase beta subunit [Lissocarpa ronliesneri]
          Length = 455

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|118594197|ref|ZP_01551544.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181]
 gi|118439975|gb|EAV46602.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181]
          Length = 474

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 23/420 (5%)

Query: 20  VVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLG----QVIR-INLDIVYIC 73
             Q G +         V     Q   + D ++   K+S        +V + +   IV   
Sbjct: 3   AKQIGKVVQCIGAVVDVEFPRDQLPKVYDALIIDDKDSTAEAGLTLEVQQQLGDGIVRTI 62

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +G  + +S G      G   ++       GR+++ LG+PID    +   +    I  K 
Sbjct: 63  AMGSSDGLSRGTQFSSTGAPIQVPVGEGTLGRIMDVLGRPIDEVGEIDSKEFR-SIHQKA 121

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P   +     +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +        
Sbjct: 122 PAFNDLSPSIELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMLELINNIAKQHSGL 181

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +F  +               K  +V    +E P  R    L+ +T+
Sbjct: 182 SVFAGVGERTREGNDFYHEMAEAGVIQLKNMKESKVAMVFGQMNEPPGNRLRVALSGLTM 241

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  + 
Sbjct: 242 AEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGRLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR  
Sbjct: 300 TKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVDPLDSTSRQL 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D      +   +  ++   + R++E RDI  I G           AV +   I  FL Q 
Sbjct: 360 DPQVVGEEHYSVARAVQSTLQRYKELRDIIAILGMDELS-PEDKLAVGRARRIQRFLSQP 418


>gi|123325719|gb|ABM74484.1| ATP synthase beta subunit [Toddalia asiatica]
          Length = 466

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVD-TRTTSPIHKSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|124361778|gb|ABN09331.1| ATP synthase beta subunit [Lissocarpa benthamii]
          Length = 465

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|75330428|sp|Q8MBG4|ATPB_CUSSA RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633449|gb|AAM52199.1| ATP synthase beta subunit [Cuscuta sandwichiana]
 gi|66876462|gb|AAY58014.1| AtpB [Cuscuta sandwichiana]
          Length = 494

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 115/416 (27%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           GYI  I      V         + + +V QG++    +   +V ++  +  V    +   
Sbjct: 20  GYIVQIIGPVLDVAFSPGMMPSIYNALVVQGRHKQEPNVTCEVQQLLGNNRVRAVAMSDT 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +    LS  I    PP + 
Sbjct: 80  DGLMRGMEVIDTGTPISVPVGGSTLGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLK 138

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S+ G 
Sbjct: 139 LDTRLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGG 198

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 199 VGERTREGNDLYMEMKESGVINQQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 258

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 259 DVNRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 316

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +     
Sbjct: 317 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQI 376

Query: 366 SAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   K    +   + R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 377 VGEQHYKTAQRVKQTLQRYKELQDIIAILGLDELSDDD-RLTVARARKIERFLSQP 431


>gi|21633313|gb|AAM52131.1| ATP synthase beta subunit [Operculina pteripes]
          Length = 490

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V    + +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPRKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMGVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|75336517|sp|Q9MS49|ATPB_BRANA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|8745523|gb|AAF78949.1|AF267641_1 ATP synthase beta subunit [Brassica napus]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P++    +     S  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVNNLGPVDTLTTS-PIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSAEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|78486502|ref|YP_392427.1| F0F1 ATP synthase subunit beta [Thiomicrospira crunogena XCL-2]
 gi|118573773|sp|Q31DM0|ATPB_THICR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78364788|gb|ABB42753.1| ATP synthase F1, beta subunit [Thiomicrospira crunogena XCL-2]
          Length = 459

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 105/405 (25%), Positives = 183/405 (45%), Gaps = 12/405 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
            G I  I      V      +  + D +     +     Q  ++  ++V    +G  + +
Sbjct: 2   NGKIVQIIGPVIDVEFKGADLPKIYDALKVDELDLTLEVQ-QQVGDNVVRAIAMGSSDGL 60

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V + G    +       GR+ + LG PID    + + +  M I    P       
Sbjct: 61  KRGMAVSNTGEAISVPVGKPTLGRIFDVLGNPIDNAGPV-ESEEKMTIHRPAPAFDELAA 119

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            ++  +TG++VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VGE
Sbjct: 120 SQELLETGVKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGE 179

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +F  +     +  K  +V    +E P  R    LT +T+AEYF  +G ++L  +
Sbjct: 180 RTREGNDFYYEMEESGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILFFV 239

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I R+  +  E++   G +P A GY  ++  E+ ++ ERI  +  + G+IT++ +V V 
Sbjct: 240 DNIYRYTLAGTEVSALLGRMPSAVGYQPTLSQEMGQIQERI--TSTKTGSITSIQAVYVP 297

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSS 375
            D+  DP   +  + LD  +VLNRS+AE G YP +DPL S SR  D      +       
Sbjct: 298 ADDLTDPAPATTFAHLDATVVLNRSIAETGIYPAIDPLDSTSRQLDPLVVGSEHYDTARG 357

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + R++E +DI  I G     +      V +   +  F  Q 
Sbjct: 358 VQETLQRYKELKDIIAILGMDELSEED-RSLVARARKMQRFFSQP 401


>gi|113910894|gb|ABI48179.1| ATPase beta subunit [Hookeria acutifolia]
          Length = 472

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + +V +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLVVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +    ++  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDTS-ITFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEEKISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|112791336|gb|ABI21938.1| ATP synthase beta subunit [Citrobacter freundii]
          Length = 421

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 176/379 (46%), Gaps = 10/379 (2%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
             V  GK S  L    ++   IV    +G  + +  G  V        +       GR++
Sbjct: 5   LEVMNGKESLVLEVQQQLGGGIVRTIAMGSSDGLRRGLEVKDLEHPIEVPVGKATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++G+
Sbjct: 65  NVLGHPIDMKGDIGEEE-RWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +       +  L+ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELSEE 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVARARKIQRFLSQP 379


>gi|37720949|gb|AAN32477.1| ATP synthase beta subunit [Japonolirion osense]
          Length = 489

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|71909723|ref|YP_287310.1| F0F1 ATP synthase subunit beta [Dechloromonas aromatica RCB]
 gi|118573524|sp|Q477Z1|ATPB_DECAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71849344|gb|AAZ48840.1| ATP synthase F1 subcomplex beta subunit [Dechloromonas aromatica
           RCB]
          Length = 466

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR+++ LG+PID    +   +
Sbjct: 53  LGDGVVRTIAMGSSDGLRRGMKVNNTGAGISVPVGMGTLGRIMDVLGRPIDEAGPIDSTE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L + I    P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 LRV-IHQPAPKFDELSSSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHAGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F   G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 232 TMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSTSR 349

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +  ++   + R++E RDI  I G           AV +   I  FL 
Sbjct: 350 QLDPQVVGEEHYSVARAVQMNLQRYKELRDIIAILGMDELS-PEDKLAVSRARKIQRFLS 408

Query: 419 QS 420
           Q 
Sbjct: 409 QP 410


>gi|312285211|gb|ADQ64347.1| ATP synthase beta subunit [Cissampelos andromorpha]
          Length = 469

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D LGQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|124361654|gb|ABN09269.1| ATP synthase beta subunit [Diospyros ehretioides]
 gi|124361700|gb|ABN09292.1| ATP synthase beta subunit [Diospyros maritima]
 gi|124361716|gb|ABN09300.1| ATP synthase beta subunit [Diospyros olen]
 gi|124361738|gb|ABN09311.1| ATP synthase beta subunit [Diospyros styraciformis]
 gi|221078715|gb|ACL99432.1| ATP synthase beta subunit [Diospyros frutescens]
 gi|221078727|gb|ACL99438.1| ATP synthase beta subunit [Diospyros olen]
 gi|221078729|gb|ACL99439.1| ATP synthase beta subunit [Diospyros olen]
 gi|221078757|gb|ACL99453.1| ATP synthase beta subunit [Diospyros samoensis]
 gi|221078759|gb|ACL99454.1| ATP synthase beta subunit [Diospyros samoensis]
 gi|221078761|gb|ACL99455.1| ATP synthase beta subunit [Diospyros samoensis]
 gi|221078797|gb|ACL99473.1| ATP synthase beta subunit [Diospyros wallichii]
          Length = 465

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|309322400|ref|YP_003934480.1| ATP synthase CF1 beta chain [Cathaya argyrophylla]
 gi|307683326|dbj|BAJ19633.1| ATP synthase CF1 beta chain [Cathaya argyrophylla]
          Length = 492

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+     +  + + +  +G+ +   GQ I++  ++        V    
Sbjct: 19  GRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA--GQEIQVTCEVQQLLGNHKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 77  MSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARITSPIHRPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINKQKISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKETLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 432


>gi|156573703|gb|ABU85184.1| ATP synthase CF1 beta subunit [Anethum graveolens]
          Length = 459

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTDGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D   S+     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGSVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        D  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAKRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|110915576|gb|ABH02576.1| ATP synthase beta subunit [Alopecurus textilis]
          Length = 472

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 34  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 93

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 94  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 152

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 153 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 273 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 331 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 391 D-RLTVARARKIERFLSQP 408


>gi|157285291|gb|ABV31385.1| ATPase [Aliivibrio wodanis]
          Length = 441

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G    +  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYANLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    YP  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAYPGDVFYLHSRLLERAARVSEAYVENFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 410


>gi|159106801|ref|YP_001531221.1| ATP synthase CF1 beta subunit [Cuscuta obtusiflora]
 gi|190358664|sp|A8W3J1|ATPB_CUSOB RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|158142525|gb|ABW20566.1| ATP synthase CF1 beta subunit [Cuscuta obtusiflora]
          Length = 494

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 115/416 (27%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           GYI  I      V         + + +V QG++    +   +V ++  +  V    +   
Sbjct: 20  GYIVQIIGPVLDVAFSPGMMPSIYNALVVQGRHKQEPNVTCEVQQLLGNNRVRAVAMSDT 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +    LS  I    PP + 
Sbjct: 80  DGLMRGMEVIDTGTPISVPVGGSTLGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLK 138

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S+ G 
Sbjct: 139 LDTRLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGG 198

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 199 VGERTREGNDLYMEMKESGVINQQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 258

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 259 DVNRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 316

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +     
Sbjct: 317 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQI 376

Query: 366 SAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   K    +   + R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 377 VGEQHYKTAQRVKQTLQRYKELQDIIAILGLDELSDDD-RLTVARARKIERFLSQP 431


>gi|63091905|emb|CAH58807.1| ATP synthase alpha chain [Enterococcus columbae]
 gi|63091909|emb|CAH58809.1| ATP synthase alpha chain [Enterococcus columbae]
 gi|63091911|emb|CAH58810.1| ATP synthase alpha chain [Enterococcus columbae]
          Length = 367

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   GR  
Sbjct: 1   RAHGL-ENAMSGELLQFSNGS---FGMAQNLESNDVGIIILGDFETIREGDKVKRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGPI-ETTKTRPVEAMAPGVMQRKSVHEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRAQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A S +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGSSQPAPLLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGIRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|34500028|gb|AAQ73596.1| ATP synthase beta subunit [Pasteurella caballi]
          Length = 445

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/410 (27%), Positives = 184/410 (44%), Gaps = 18/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+      + G V+     +   +V    +G
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVP----KVYDALKVTDAGLVLEVQQQLGGGVVRCIALG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+PID    +G  + +  I    P  
Sbjct: 57  TSDGLKRGLSVTNTGNPISVPVGTKTLGRIMNVLGEPIDQKGDIGAEE-TWAIHRAAPSY 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS-- 193
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +    S  
Sbjct: 116 EEQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSDS 175

Query: 194 -LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             VGER  E  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 176 LXVGERTPEGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +  
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 354 DVARGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 402


>gi|7687982|emb|CAB89712.1| ATP synthase beta subunit [Hedycarya arborea]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|28630332|gb|AAM93478.1| H+-transporting ATP synthase alpha subunit isoform 1 [Petromyzon
           marinus]
          Length = 363

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 86/365 (23%), Positives = 161/365 (44%), Gaps = 18/365 (4%)

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
                G  + I  GD+V   G    +       GRV++ALG  IDG   LG   +   + 
Sbjct: 1   GAVVFGNDKLIKEGDIVKRTGAIVDVPVGVELLGRVVDALGNAIDGKGPLGSS-IRRRVG 59

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARS 184
            K P  + R  V++  +TGI+ +D   P+  GQR  +      GK      T+++    +
Sbjct: 60  LKAPGIIPRISVKEPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIINQKRFN 119

Query: 185 DCFD-----KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTA 238
           +  D       I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP + 
Sbjct: 120 EGKDEKKKLYCIYVAIGQKRSTVAKLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSG 179

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            ++ E+F   G + L+I D +++ A + R+++      P    YP  VF    RLLER  
Sbjct: 180 CSMGEFFRDNGKHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAA 239

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
                   G++TA+  +     + +  I  +V S  D  I L   L  +G  P ++   S
Sbjct: 240 KMHDNFGGGSLTALPVIETQAGDVSAYIPTNVISNTDEQIFLETELFYKGIRPAINVGLS 299

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+   A +   K++  ++   + ++ E   +     +   +D    + +++   + + 
Sbjct: 300 VSRVGSAAQTKAMKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLNRGVRLTEL 356

Query: 417 LKQSP 421
           LKQ  
Sbjct: 357 LKQRQ 361


>gi|307327917|ref|ZP_07607099.1| ATP synthase F1, alpha subunit [Streptomyces violaceusniger Tu
           4113]
 gi|306886435|gb|EFN17439.1| ATP synthase F1, alpha subunit [Streptomyces violaceusniger Tu
           4113]
          Length = 523

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 93/447 (20%), Positives = 173/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQAYKPDAASREEVGTVSVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAVVLGEFSGIEEGQQVHRTGEVLSVAVGEGYLGRVVDPLGAPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M+R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPTVMDRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALCVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDPKKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + +F E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHRAMRQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSPS-DLSSEDVFQEITK 435
              + + LKQ      S+ED    I  
Sbjct: 425 GARMVELLKQGQYAPFSTEDEIVSIWA 451


>gi|122893997|ref|YP_001004193.1| ATP synthase CF1 beta subunit [Ranunculus macranthus]
 gi|69214420|gb|AAZ03790.1| ATP synthase beta chain [Ranunculus macranthus]
 gi|85540811|gb|ABC70763.1| ATP synthase CF1 beta subunit [Ranunculus macranthus]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DAVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|37720941|gb|AAN32473.1| ATP synthase beta subunit [Scheuchzeria palustris]
          Length = 481

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGRMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATEGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|7688433|emb|CAB89729.1| ATP synthase beta subunit [Xerosicyos danguyi]
          Length = 487

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V        +       GR
Sbjct: 42  KGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPIDNLGPVD-TRTTSPIHRSAPCFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLTVARARXIERFLSQP 426


>gi|119386525|ref|YP_917580.1| F0F1 ATP synthase subunit beta [Paracoccus denitrificans PD1222]
 gi|190358696|sp|A1B8P0|ATPB_PARDP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119377120|gb|ABL71884.1| ATP synthase F1 subcomplex beta subunit [Paracoccus denitrificans
           PD1222]
          Length = 474

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 188/422 (44%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V    Q   + + +  +      + +V   +  + V    +  
Sbjct: 1   MAEANGKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDA 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GR++N +G+P+D    + +   +  I  + P   
Sbjct: 61  TEGLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPV-EATQTRAIHQQAPDFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 AQATASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +   + K          +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMVESGVIKPDDLSKSQVALVYGQMNEPPGARMRVALTGLTVAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + 
Sbjct: 240 RDATGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKN 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D A
Sbjct: 298 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRILDPA 357

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +  ++   +  ++ +++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 358 VVGEEHYQVARDVQGILQKYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|332828934|gb|EGK01617.1| ATP synthase subunit alpha [Dysgonomonas gadei ATCC BAA-286]
          Length = 528

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 101/450 (22%), Positives = 172/450 (38%), Gaps = 42/450 (9%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           ++  LE ++   +        + G +  +      +  L +     + +         + 
Sbjct: 14  LKMQLENISNRVQFD------EVGTVLEVGDGVVRIYGL-KNAEANELLEFDNG---IMA 63

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
            V+ +  D V    +G  ++I  G  V    R   I+      GRVI  LG+P+DG   +
Sbjct: 64  VVMNLEEDNVGAVLLGPSDQIKEGFSVKRTKRIASINVGDGMLGRVITPLGQPLDGKGPI 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
               L M +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK     
Sbjct: 124 TGELLEMPLERKAPGVIYRQPVAQPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAI 183

Query: 175 STLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231
            T+++  +  +  D    I   +G++   V   +E        K +VVV AT+ E   L+
Sbjct: 184 DTIINQKSNYEAGDPVYCIYVAIGQKASTVANIVETLREKGAMKYTVVVSATAAEPAALQ 243

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                    I EYF   G + L++ D +++ A + RE++      P    YP  VF    
Sbjct: 244 YFGAFAGAAIGEYFRDTGRHALVVYDDLSKQAVAYREVSLILRRPPGREAYPGDVFYLHS 303

Query: 292 RLLERIGPSE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSI 331
           RLLER                         K  G++TA+  +     + +  I  +V SI
Sbjct: 304 RLLERAAKIISQQEVAEQMNDLPESLKGRVKAGGSLTALPIIETQAGDVSAYIPTNVISI 363

Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391
            DG I L+  L   G  P ++   SVSR+   A     KK+  +L     ++ E      
Sbjct: 364 TDGQIFLDVDLFNSGLRPAINVGISVSRVGGSAQVKAMKKVAGTLKIDQAQYRELEAFTQ 423

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            GG    +D +    + +       L Q  
Sbjct: 424 FGG---DLDAVTAMTIDKGKKNTQLLVQPQ 450


>gi|312285219|gb|ADQ64351.1| ATP synthase beta subunit [Cyclea hypoglauca]
          Length = 469

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D LGQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|156839682|ref|XP_001643529.1| hypothetical protein Kpol_1008p8 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114144|gb|EDO15671.1| hypothetical protein Kpol_1008p8 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 504

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 194/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G + ++      V    + +  + + +  Q  N   + +V   +  + V    +   E +
Sbjct: 37  GKVRAVIGAIVDVQFEQENLPAILNALEIQTPNGKLVLEVSQHLGENTVRTIAMDGTEGL 96

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G+ V   G    +       GR+IN +G+PID    +    L   I ++ P  + +  
Sbjct: 97  VRGENVIDTGAPISVPVGRETLGRIINVIGEPIDERGPIN-SKLRKPIHAEPPSFVEQST 155

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 156 EAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGE 215

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  +   
Sbjct: 216 RTREGNDLYREMRETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQ 275

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG++T+V
Sbjct: 276 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSV 333

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A    + 
Sbjct: 334 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEH 393

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             + + +   +  ++  +DI  I G     +      V +   I  FL Q     +  +V
Sbjct: 394 YDVATRVQETLQAYKSLQDIIAILGMDELSEQD-KITVERARKIQRFLSQP---FAVAEV 449

Query: 430 FQEITKKL 437
           F  I  KL
Sbjct: 450 FTGIPGKL 457


>gi|34500032|gb|AAQ73598.1| ATP synthase beta subunit [Avibacterium gallinarum]
          Length = 444

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 183/410 (44%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+   N +  G V+     +   IV    +G
Sbjct: 1   MATGKIVQIIXAVIDVEFPQDAVP----KVYDALNVET-GLVLEVQQQLGGGIVRCIAMG 55

Query: 77  IGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V +      +       GR++N LG+PID    +G  + +  I    P  
Sbjct: 56  SSDGLKRGLSVSNTAKPISVPVGTKTLGRIMNVLGEPIDEQGPIGAEE-TWSIHRPAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EDQANSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGALQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +     R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGTYKRYRELKDIIAILGMDELSEED-KLVVARATKIERFLSQP 401


>gi|7708298|emb|CAB90074.1| ATP synthase beta subunit [Erica sicula]
          Length = 475

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V QG+++     + + +V ++  +  V    + 
Sbjct: 6   GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDTAGQPINVICEVQQLVGNNRVRAVAMS 65

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    L     +  I    P  
Sbjct: 66  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPLD-TRTTSPIHRSAPAF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 125 IELETKLCIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 184

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  ++               K  +V    +E P  R    LTA+T+AEY
Sbjct: 185 GGVGERTREGNDLYKEMKETGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 244

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 245 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTK 302

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 303 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 362

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 RIVGHKHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRARKIKRFLSQP 419


>gi|163942993|ref|YP_001647877.1| F0F1 ATP synthase subunit beta [Bacillus weihenstephanensis KBAB4]
 gi|226739980|sp|A9VSA3|ATPB_BACWK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|163865190|gb|ABY46249.1| ATP synthase F1, beta subunit [Bacillus weihenstephanensis KBAB4]
          Length = 469

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGDVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|85704182|ref|ZP_01035285.1| ATP synthase subunit B [Roseovarius sp. 217]
 gi|85671502|gb|EAQ26360.1| ATP synthase subunit B [Roseovarius sp. 217]
          Length = 474

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 102/417 (24%), Positives = 185/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +         + +V   +  + V    +   E + 
Sbjct: 6   GKVTQVIGAVVDVHFDGDLPAILNALQTDNNGKKLILEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    +   +    I    P    +   
Sbjct: 66  RGQPVSDTGAPISVPVGNATLGRILNVIGEPVDEGAPIKATEYR-SIHQPAPEFSEQSTA 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  ++G+IT+
Sbjct: 245 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKQGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRLMDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|312967946|ref|ZP_07782158.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 2362-75]
 gi|312287507|gb|EFR15415.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 2362-75]
 gi|320193811|gb|EFW68444.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli
           WV_060327]
          Length = 446

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 156/409 (38%), Positives = 229/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I +I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKIINIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 88

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P++ +           + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPMESNIVAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+    +I +F++QS  D+SS +
Sbjct: 387 IATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYE 435


>gi|158602295|gb|ABW74614.1| ATP synthase beta subunit [Thalictrum thalictroides]
          Length = 479

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|158602287|gb|ABW74610.1| ATP synthase beta subunit [Ranunculus hispidus]
          Length = 497

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 20  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DAVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|206970293|ref|ZP_03231246.1| ATP synthase F1, beta subunit [Bacillus cereus AH1134]
 gi|228924040|ref|ZP_04087316.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955552|ref|ZP_04117555.1| ATP synthase subunit beta [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229072772|ref|ZP_04205971.1| ATP synthase subunit beta [Bacillus cereus F65185]
 gi|229082519|ref|ZP_04214982.1| ATP synthase subunit beta [Bacillus cereus Rock4-2]
 gi|229153468|ref|ZP_04281646.1| ATP synthase subunit beta [Bacillus cereus m1550]
 gi|229181552|ref|ZP_04308878.1| ATP synthase subunit beta [Bacillus cereus 172560W]
 gi|206734870|gb|EDZ52039.1| ATP synthase F1, beta subunit [Bacillus cereus AH1134]
 gi|228601920|gb|EEK59415.1| ATP synthase subunit beta [Bacillus cereus 172560W]
 gi|228630072|gb|EEK86723.1| ATP synthase subunit beta [Bacillus cereus m1550]
 gi|228700951|gb|EEL53474.1| ATP synthase subunit beta [Bacillus cereus Rock4-2]
 gi|228710263|gb|EEL62238.1| ATP synthase subunit beta [Bacillus cereus F65185]
 gi|228804114|gb|EEM50730.1| ATP synthase subunit beta [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228835530|gb|EEM80895.1| ATP synthase subunit beta [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 468

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 48  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKPISVPVGDVTLGRVFNVLGDAIDLDGEVP 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 108 ADVHRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 168 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 346 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|113910898|gb|ABI48181.1| ATPase beta subunit [Thuidium recognitum]
          Length = 472

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q   
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQPSF 414


>gi|75330507|sp|Q8MBQ2|ATPB_IPOWR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633255|gb|AAM52102.1| ATP synthase beta subunit [Ipomoea wrightii]
          Length = 490

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMGVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|6686866|emb|CAB64753.1| ATP synthase beta subunit [Arctostaphylos uva-ursi]
 gi|6687203|emb|CAB64874.1| ATP synthase beta subunit [Couroupita guianensis]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   + +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RETVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +I +F G G GK+ L+             +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIRLFGGXGXGKTVLIMEVINXIAKAHGXVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGXGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|319650867|ref|ZP_08005004.1| F0F1 ATP synthase subunit beta [Bacillus sp. 2_A_57_CT2]
 gi|317397465|gb|EFV78166.1| F0F1 ATP synthase subunit beta [Bacillus sp. 2_A_57_CT2]
          Length = 473

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+ ID D ++ 
Sbjct: 51  ALHLGDDTVRTIAMSSTDGLQRGSEVVDTGASISVPVGDVTLGRVFNVLGESIDLDPAIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDSIHREAPKFEQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEFFRDDQGQDVLFFMDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   +   +   + R+ E +DI  I G     D      V +   I 
Sbjct: 349 STSRALSPEIVGEEHYSVARQVQQTLQRYRELQDIIAILGMDELSDED-KLVVARARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|221078703|gb|ACL99426.1| ATP synthase beta subunit [Diospyros ebenum]
          Length = 465

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  +   +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|170178336|gb|ACB10587.1| ATP synthase beta subunit [Cornus eydeana]
          Length = 454

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGTNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEDD-RLIVARARKIERFLSQP 395


>gi|212640520|ref|YP_002317040.1| F0F1 ATP synthase subunit beta [Anoxybacillus flavithermus WK1]
 gi|226739973|sp|B7GMF3|ATPB_ANOFW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|212562000|gb|ACJ35055.1| F0F1-type ATP synthase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 473

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 169/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID  + + 
Sbjct: 51  ALHLGDDTVRTIAMSTTDGLVRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLGEEIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDAIHRPAPKFEQLSTQVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVINKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTAVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 349 STSRALSPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|124361754|gb|ABN09319.1| ATP synthase beta subunit [Diospyros virginiana]
          Length = 465

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 414


>gi|119350447|gb|ABL63174.1| AtpB [Ankyra starrii]
          Length = 388

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 5   VRAVSMNPTEGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEPVDNMGPVN-NEETLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       S+   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYSCAQSIKKTLQRYKELQDIIAILGLDELSEED-RLVVTRARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|52082883|gb|AAU26022.1| ATPase beta subunit [Gymnotheca chinensis]
          Length = 476

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|37720943|gb|AAN32474.1| ATP synthase beta subunit [Triantha glutinosa]
          Length = 489

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVX-TRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|63091797|emb|CAH58749.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091843|emb|CAH58772.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091901|emb|CAH58802.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091935|emb|CAH58825.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091943|emb|CAH58829.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091947|emb|CAH58831.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091949|emb|CAH58832.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091951|emb|CAH58833.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091953|emb|CAH58834.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091955|emb|CAH58835.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091957|emb|CAH58836.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091959|emb|CAH58837.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091973|emb|CAH58844.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091977|emb|CAH58846.1| ATP synthase alpha chain [Enterococcus faecium]
 gi|63091979|emb|CAH58847.1| ATP synthase alpha chain [Enterococcus faecium]
          Length = 367

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGEIV-TDKARPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|21633317|gb|AAM52133.1| ATP synthase beta subunit [Operculina turpethum]
          Length = 490

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMGVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|6689010|emb|CAB65359.1| ATP synthase beta subunit [Petalonyx nitidus]
          Length = 498

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|4206558|gb|AAD11710.1| ATP synthase beta subunit [Pilocarpus pennatifolius]
          Length = 444

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 12  KGRDTVGQPINVTCEVQQLLGNNRVRAIAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQNIA 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRELAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|331268171|ref|YP_004347820.1| ATP synthase CF1 beta subunit [Chlorella variabilis]
 gi|325296348|gb|ADZ05068.1| ATP synthase CF1 beta subunit [Chlorella variabilis]
          Length = 481

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V+  +  +  + + +  QGKN          +V ++  D  V    + 
Sbjct: 11  GRITQIIGPVLDVSFPAGKMPNIYNALTVQGKNEAGQEISVTCEVQQLLGDHCVRAVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+   +       GR+ N LG+P+D    +   D  + I    P  
Sbjct: 71  ATDGLMRGMEVMDSGKPLNVPVGPTTLGRIFNVLGEPVDNLGPVNNKDQ-LPIHRSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 VDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESGVINESNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D   +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 WIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 424


>gi|291615580|ref|YP_003518322.1| AtpD [Pantoea ananatis LMG 20103]
 gi|291150610|gb|ADD75194.1| AtpD [Pantoea ananatis LMG 20103]
          Length = 473

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/417 (27%), Positives = 186/417 (44%), Gaps = 15/417 (3%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYIC 73
            +   +  G I  I      V      V        V  G     L    ++   +V   
Sbjct: 4   GRGFKMAAGKIVQIIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTI 63

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM----EI 128
            +G  + +  G  V    +  ++       GR++N LG+PID    L + D S      I
Sbjct: 64  AMGTSDGLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLTEEDGSAVEVSSI 123

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P   ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +
Sbjct: 124 HRPAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAE 183

Query: 189 KV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                + + VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE 
Sbjct: 184 HSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEK 243

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + 
Sbjct: 244 FRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKT 301

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D  
Sbjct: 302 GSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPL 361

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +   +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 VVGQEHYDVARGVQSLLQRYQELKDIIAILGMDELSEED-KLLVARARKIQRFLSQP 417


>gi|226326989|ref|ZP_03802507.1| hypothetical protein PROPEN_00849 [Proteus penneri ATCC 35198]
 gi|225204826|gb|EEG87180.1| hypothetical protein PROPEN_00849 [Proteus penneri ATCC 35198]
          Length = 460

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/408 (27%), Positives = 182/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +             V        V  GK    L    ++   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDAEFPQDSVPKVYDALEVMNGKEKLVLEVQQQLGGGIVRCIAMGTS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +S G  V   G    +       GR++N LG PID    +   +    I  + P    
Sbjct: 61  DGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDMKGDIATEE-RWSIHREAPTYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|124361622|gb|ABN09253.1| ATP synthase beta subunit [Diospyros brandisiana]
 gi|124361628|gb|ABN09256.1| ATP synthase beta subunit [Diospyros cauliflora]
          Length = 463

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910882|gb|ABI48173.1| ATPase beta subunit [Orthotrichum sordidum]
          Length = 473

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/416 (25%), Positives = 181/416 (43%), Gaps = 25/416 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIG 78
           I+ I      VT    +   + + ++ +G+N+     +   +V ++  +  V    +   
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTANQEINVTCEVQQLLGNNKVRAVAMSAT 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P    
Sbjct: 61  DGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAFTQ 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 120 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 179

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 180 VGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 239

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 240 DVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 298 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWI 357

Query: 366 SA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 VGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|7620545|gb|AAF64659.1| F1 ATPase alpha subunit [Illicium lanceolatum]
          Length = 385

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 90/390 (23%), Positives = 158/390 (40%), Gaps = 23/390 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V  L++ +  G+ V      S   G    +  + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYGLNE-IQAGEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G     P      GRV++ALG PIDG  +L   +    +  K P  + RQ V +  +TG
Sbjct: 57  TGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQ 175

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I 
Sbjct: 176 KRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  + 
Sbjct: 236 DDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V  I DG I     L   G  P ++  +SVSR+   A     K++  
Sbjct: 296 TQAGDVSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGSSVSRVGSAAQLRAMKQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           S    + ++ E   +  +  +   +D    
Sbjct: 356 SSKLELAQYRE---VAALAQFGSDLDAATQ 382


>gi|241912924|gb|ACS72140.1| AtpB [Stenoptera acuta]
          Length = 489

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110915592|gb|ABH02584.1| ATP synthase beta subunit [Beckmannia syzigachne]
          Length = 472

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 34  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 93

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 94  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 152

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 153 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 273 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 331 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 391 D-RLTVARARKIERFLSQP 408


>gi|154484980|ref|ZP_02027428.1| hypothetical protein EUBVEN_02698 [Eubacterium ventriosum ATCC
           27560]
 gi|149733933|gb|EDM50052.1| hypothetical protein EUBVEN_02698 [Eubacterium ventriosum ATCC
           27560]
          Length = 453

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 163/383 (42%), Gaps = 13/383 (3%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWC 102
             G+ V+ +       G V  I  D V     G   EI  G  V    +   I     + 
Sbjct: 1   MYGEIVIFENG---VKGMVQDIKRDQVGCIIFGKDTEIKEGTKVTRTKKKAGIPVGDAFL 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++NALG PIDG   + K D    I  + P  ++RQ V +  +TGI  ID   P+  GQ
Sbjct: 58  GRIVNALGAPIDGKGEI-KADDYRAIEQEAPGIVDRQSVSQPMETGILAIDSMLPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           R  +      GK+++      +        I   +G++   V + +           S+V
Sbjct: 117 RELIIGDRQTGKTSIAIDTILNQKGKDVICIYVAIGQKASTVAKLVNTLKKHGAMDYSIV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           + +T+ ES  L+ +AP     +AEYF  KG +VL++ D +++ A + R ++      P  
Sbjct: 177 LSSTASESASLQYIAPYAGTALAEYFMYKGKDVLIVYDDLSKHAVAYRALSLLLERSPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  VF    RLLER      E   G+ITA+  +     + +  I  +V SI DG I 
Sbjct: 237 EAYPGDVFYLHSRLLERSSKLSDELGGGSITALPIIETQDGDVSAYIPTNVISITDGQIF 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L   G  P ++   SVSR+   A +   KK   ++   + ++ E     +   +  
Sbjct: 297 LESDLFFSGMRPAINVGISVSRVGGAAQTKAMKKAAGTIRIDLAQYREME---VFTQFSS 353

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
            +D    + +     + + LKQ 
Sbjct: 354 DLDDTTKEQLQYGKGLMELLKQP 376


>gi|14718195|gb|AAK72836.1| ATP synthase beta subunit [Puya raimondii]
          Length = 488

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+N   +GQ I +  ++        V    +   + 
Sbjct: 25  IGPVLDVVFPPGKMPNIYNALVVKGRN--TVGQQINVTCEVQQLLGNNRVRAVAMSATDG 82

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 83  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLD 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 142 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 201

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 202 ERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 261

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 262 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 319

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 320 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 379

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 380 EEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|14718024|gb|AAK72753.1| ATP synthase beta subunit [Cucurbita pepo]
          Length = 483

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DIAGQEINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V +      +       GR+ N LG+PID    +     +  I    P
Sbjct: 72  MSATDGLKRGMEVVNTRAPLSVPVGGATLGRIFNVLGEPIDNXGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVEQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|301633127|gb|ADK86681.1| ATP synthase F1, alpha subunit [Mycoplasma pneumoniae FH]
          Length = 518

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 94/434 (21%), Positives = 182/434 (41%), Gaps = 15/434 (3%)

Query: 1   MQKNLETLAQLAEDYSKN-LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + + +  +    + YSK     + G + S+      V+ L +   L + +  +    +  
Sbjct: 5   LNEYVALIKNEIKKYSKQIFNSEIGKVISVADGIAKVSGL-ENALLNELIEFEN---NVQ 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G  + +  + V +   G   +I  G          +        GR++NALG+P+DG   
Sbjct: 61  GIALNLEQNTVGVALFGDYSKIREGSTAKRTHNVMQTPVGDVMLGRIVNALGEPVDGRGP 120

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +   ++    P  M R+ V +  +TGI  ID   P+  GQR  +      GK+++ 
Sbjct: 121 IKAEEFD-QVEKIAPGVMTRKTVNQPLETGILTIDALFPIGKGQRELIVGDRQTGKTSIA 179

Query: 179 SMFARSDCF--DKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
                +        +   +G++   V + +      D++K + VV AT+     +  + P
Sbjct: 180 IDTIINQRGKDVYCVYVAMGQKNSSVAQIVHQLEVTDSMKYTTVVCATASNPASMIYLTP 239

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            T +TIAEY+  +G +VL++ D +++ A + R ++      P    +P  VF    RLLE
Sbjct: 240 FTGITIAEYWLKQGKDVLIVFDDLSKHAIAYRTLSLLLRRPPGREAFPGDVFYLHSRLLE 299

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +E   G+ITA+  +     + +  I  +V SI DG + +  +L   G+ P +  
Sbjct: 300 RACRLNEEHGGGSITALPIIETQAGDISAYIPTNVISITDGQLFMVSNLFNSGQRPAIHV 359

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K+   SL   + ++ E         +   +D    + + +   +
Sbjct: 360 GLSVSRVGSAAQIKAIKQQTGSLKLELAQYSELD---SFSQFGSDLDENTKQILERGKRV 416

Query: 414 YDFLKQSPSDLSSE 427
            + +KQ      S+
Sbjct: 417 MEMIKQPNGKPYSQ 430


>gi|124361692|gb|ABN09288.1| ATP synthase beta subunit [Diospyros maingayi]
 gi|124361728|gb|ABN09306.1| ATP synthase beta subunit [Diospyros puncticulosa]
          Length = 465

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRYAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|20269400|gb|AAM17927.1| ATP synthase beta subunit [Chimaphila umbellata]
          Length = 482

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V   S  +  + + +V +G+N   +GQ I +  ++        V    
Sbjct: 20  GRIVQIIGPVLDVAFPSGKMPNIYNALVVKGRN--TVGQPINVTCEVQQLLGNNRVRTVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  ++    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYKEIKESGVINEQNIAESKVALIYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLGTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +    D   K+   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QRRIVGDEHYKIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|32815647|gb|AAP88220.1| ATP synthase beta subunit [Cyclocarya paliurus]
          Length = 457

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTTGQQINVTCEVQQLLGNNRVKAVAMSATDGLMRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVN-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|5758901|gb|AAD50875.1| ATP synthase beta subunit [Orchidantha fimbriata]
          Length = 496

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +      + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNVGKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEKHYEIAQRVKQTSQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|261856899|ref|YP_003264182.1| ATP synthase F1 subunit beta [Halothiobacillus neapolitanus c2]
 gi|261837368|gb|ACX97135.1| ATP synthase F1, beta subunit [Halothiobacillus neapolitanus c2]
          Length = 462

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/411 (28%), Positives = 188/411 (45%), Gaps = 20/411 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V+     +  G ++     I   +V    +G
Sbjct: 1   MSSGKIVEIIGAVIDVEFPRDAVP----KVYDAIKIEQTGLIVEVQQQIGDGVVRGIAMG 56

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G    + G   ++       GR+++ LG PID    +   D    I  K P  
Sbjct: 57  SSDGLKRGMTAVNTGSPIQVPVGKGTLGRIMDVLGHPIDNAGDV-ACDEKWSIHRKPPTF 115

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 116 DEQANSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVF 175

Query: 193 SLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +   G  L K  +V    +E P  R    LT +T+AE+F  +G +
Sbjct: 176 AGVGERTREGNDFYHEMKDGGVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRD 235

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 236 VLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 293

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D     D   
Sbjct: 294 AVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAIDPLDSTSRQLDPQVVGDTHY 353

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +  S+   + R++E +DI  I G     D   DKA V +   I  F+ Q 
Sbjct: 354 SVARSVQKTLQRYKELKDIIAILGMDELSDD--DKATVSRARKIQRFMSQP 402


>gi|157285031|gb|ABV31255.1| ATPase [Vibrio campbellii]
 gi|157285067|gb|ABV31273.1| ATPase [Vibrio campbellii]
 gi|157285251|gb|ABV31365.1| ATPase [Vibrio campbellii]
          Length = 441

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|134093206|ref|YP_001109508.1| ATP synthase CF1 beta subunit [Populus trichocarpa]
 gi|190358701|sp|A4GYR7|ATPB_POPTR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|133712068|gb|ABO36711.1| ATPase beta subunit [Populus trichocarpa]
          Length = 498

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D + Q I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TQITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6688706|emb|CAB65227.1| ATP synthase beta subunit [Montinia caryophyllacea]
          Length = 498

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D+ GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDSAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDMGAAISVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758853|gb|AAD50827.1| ATP synthase beta subunit [Aechmea chantinii]
          Length = 496

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+N   +GQ I +  ++        V    +   + 
Sbjct: 27  IGPVLDVVFPPGKMPNIYNALVVKGRN--AVGQQINVTCEVQQLLGNNRVRAVAMSATDG 84

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 85  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLD 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 144 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 203

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 204 ERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 263

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 264 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 322 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 382 EEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|229002378|dbj|BAH57913.1| ATP synthase beta subunit [Potamogeton dentatus]
 gi|229002384|dbj|BAH57914.1| ATP synthase beta subunit [Potamogeton gramineus]
          Length = 488

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 104/388 (26%), Positives = 173/388 (44%), Gaps = 19/388 (4%)

Query: 48  FVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
            V   G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+
Sbjct: 48  VVKTVGEQINVTCEVQQLLGNNRVRAVAMSATDGLRRGMAVIDTGAPLSVPVGGATLGRI 107

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 108 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 166

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 167 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 226

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 227 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVSALL 286

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 287 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 344

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I
Sbjct: 345 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYEIAQRVKETLQRYKELQDIIAI 404

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 405 LGLDELSEED-RLTVARARKIERFLSQP 431


>gi|110915590|gb|ABH02583.1| ATP synthase beta subunit [Helictotrichon hookeri]
          Length = 477

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 39  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 98

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 99  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 157

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 158 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 217

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 218 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 277

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 278 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 335

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 336 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 395

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 396 D-RLTVARARKIERFLSQP 413


>gi|156530173|gb|ABU75183.1| AtpB [Samadera bidwillii]
          Length = 491

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I         +  + V    
Sbjct: 14  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMICEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDNKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 427


>gi|66276273|gb|AAY44151.1| ATP synthase beta subunit [Dendrosicyos socotranus]
          Length = 488

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTAGQEINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVVDTRAPLSVPVGGTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|169260963|gb|ACA52083.1| ATP synthase beta subunit [Sphagnum sp. Lafarge Swamp 28-07-02]
          Length = 413

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +  G  + 
Sbjct: 2   NKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAG-TTF 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|157285139|gb|ABV31309.1| ATPase [Vibrio harveyi]
          Length = 441

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|228016009|gb|ACP50848.1| ATP synthase CF1 beta subunit [Pinus resinosa]
          Length = 492

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/443 (25%), Positives = 193/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S ++    G I+ I      V+     +  + + ++ +G+ +   
Sbjct: 1   MRKNPLVLG-----VSASVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLIVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVD-ARITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|296138980|ref|YP_003646223.1| ATP synthase F1 subunit alpha [Tsukamurella paurometabola DSM
           20162]
 gi|296027114|gb|ADG77884.1| ATP synthase F1, alpha subunit [Tsukamurella paurometabola DSM
           20162]
          Length = 544

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/425 (24%), Positives = 175/425 (41%), Gaps = 23/425 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +S        VT L       + +   G     LG  + ++ D +    +G  E +  
Sbjct: 32  GTVSDTADGIAHVTGL-PGAMANELLEFPGG---VLGVALNLDEDEIGAVILGNYESLEE 87

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G    +     + GRV+N LG+PIDG   +   +  + +  +    + RQ VE
Sbjct: 88  GQQVRRTGDVLSVPVGDKFLGRVVNPLGQPIDGLGDIEAEEQRV-LELQAATVLERQPVE 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVII 192
           +   TGI+ ID  T +  GQR  V      GK      T+L+  A  +  D     + I 
Sbjct: 147 ESLATGIKAIDAMTAIGRGQRQLVIGDRKTGKTAVCVDTILNQKANWETGDPTKQVRCIY 206

Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++G  +               + +V A + +S   + +AP T   + +++  +G +
Sbjct: 207 VAIGQKGSTIAGVKSALDEAGAMEYTTIVAAPASDSAGFKWLAPYTGSALGQHWMYQGKH 266

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITA 309
           VL++ D +++ A + R I+      P    YP  VF    RLLER          G++TA
Sbjct: 267 VLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSRLLERSAKLSDALGGGSMTA 326

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           +  +    ++ +  I  +V SI DG + L   L  +G  P ++   SVSR+   A +   
Sbjct: 327 LPIIETKANDVSAFIPTNVISITDGQVFLESDLFNKGVRPAINVGTSVSRVGGAAQTKGL 386

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLSSED 428
           KK+  SL   + +F E         +   +D      + +     + LKQ   S +S ED
Sbjct: 387 KKVSGSLRLELAQFRELE---AFSAFASDLDDASKAQLARGARWVELLKQDQYSPVSVED 443

Query: 429 VFQEI 433
               I
Sbjct: 444 EIVSI 448


>gi|114509230|gb|ABI75183.1| ATPase alpha subunit [Stratiotes aloides]
          Length = 360

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 160/365 (43%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V     +S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEF---SSGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAKENAKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILESANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREI 360


>gi|119024594|dbj|BAF40442.1| ATP synthase beta subunit [Symphonia tanalensis]
          Length = 489

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     D   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQEFDVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|7708503|emb|CAB89932.1| ATP synthase beta subunit [Myriophyllum sibiricum]
          Length = 488

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V         +   +V +G   DN GQ I +  ++        V    
Sbjct: 11  GRITQIIGPVLDVAFSPGNMPNIYSALVVKG--RDNAGQQINMTCEVQQLLGNNRVRAIA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVDTRTIS-PIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|7708532|emb|CAB89958.1| ATP synthase beta subunit [Paeonia mlokosewitschii]
 gi|14718159|gb|AAK72818.1| ATP synthase beta subunit [Paeonia suffruticosa]
          Length = 481

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIR--------INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D++GQ I         +  + V    +   E +  G  V   G    +       GR
Sbjct: 41  KGQDSVGQPINVTWEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGSTLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I  F  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFHFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEDD-RLTVARARKIEXFLSQP 425


>gi|32815651|gb|AAP88222.1| ATP synthase beta subunit [Juglans mandshurica]
          Length = 457

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTTGQQINVTCEVQQLLGNNRVKAVAMSATDGLMRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|62902825|gb|AAY19327.1| ATP synthase beta subunit [Parnassia palustris]
          Length = 470

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 2   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGVPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V   +  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 KGSITSIQAVYVPAXDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|28461221|ref|NP_786990.1| ATP synthase subunit beta, mitochondrial precursor [Bos taurus]
 gi|114543|sp|P00829|ATPB_BOVIN RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|262118383|pdb|2W6E|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118384|pdb|2W6E|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118385|pdb|2W6E|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           1.
 gi|262118390|pdb|2W6F|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118391|pdb|2W6F|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118392|pdb|2W6F|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           2.
 gi|262118397|pdb|2W6I|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118398|pdb|2W6I|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118399|pdb|2W6I|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4b.
 gi|262118406|pdb|2W6J|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118407|pdb|2W6J|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262118408|pdb|2W6J|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           5.
 gi|262306977|pdb|2W6G|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306978|pdb|2W6G|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306979|pdb|2W6G|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           3.
 gi|262306984|pdb|2W6H|D Chain D, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306985|pdb|2W6H|E Chain E, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|262306986|pdb|2W6H|F Chain F, Low Resolution Structures Of Bovine Mitochondrial
           F1-Atpase During Controlled Dehydration: Hydration State
           4a.
 gi|162711|gb|AAA30395.1| F-1-ATPase beta-subunit precursor [Bos taurus]
 gi|94574271|gb|AAI16100.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Bos taurus]
 gi|296487629|gb|DAA29742.1| mitochondrial ATP synthase beta subunit precursor [Bos taurus]
          Length = 528

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 192/431 (44%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  ATTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFVEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 470

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 471 AEVFTGHLGKL 481


>gi|311281703|ref|YP_003943934.1| ATP synthase F1, beta subunit [Enterobacter cloacae SCF1]
 gi|308750898|gb|ADO50650.1| ATP synthase F1, beta subunit [Enterobacter cloacae SCF1]
          Length = 460

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  Q      + +V + +   IV    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGKERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G +V        +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLVVNDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|294638351|ref|ZP_06716604.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685]
 gi|291088604|gb|EFE21165.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685]
          Length = 460

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 188/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  +G  +  + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVKGGATKLVLEVQQQLGGGVVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G +V        +       GR++N LG P+D    +G+ +    I    P   +
Sbjct: 61  DGLRRGLVVEDQDHPIEVPVGKATLGRIMNVLGDPVDMKGEIGEEE-RWAIHRAAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|257852934|gb|ACV71478.1| ATP synthase beta subunit [Montrouziera cauliflora]
          Length = 497

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEIDVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|7688411|emb|CAB89743.1| ATP synthase beta subunit [Utricularia gibba]
          Length = 481

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 28/420 (6%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G  +  I  V        +   + + ++ QG     +G+ I +  ++        V    
Sbjct: 11  GRXVQFIGPVIDVAFLPGKMPNIYNALIVQG--RATVGEPINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 69  MSATDVLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|7708280|emb|CAB90060.1| ATP synthase beta subunit [Dryas drummondii]
          Length = 484

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRXVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 425


>gi|172058681|ref|YP_001815141.1| F0F1 ATP synthase subunit beta [Exiguobacterium sibiricum 255-15]
 gi|171991202|gb|ACB62124.1| ATP synthase F1, beta subunit [Exiguobacterium sibiricum 255-15]
          Length = 472

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 172/366 (46%), Gaps = 11/366 (3%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D+V    +   + +  G  V   G    +       GRV N LG PID    L 
Sbjct: 54  ALHLGDDVVRTIAMDSTDGVRRGVEVLDTGAPISVPVGEATLGRVFNVLGNPIDEK-ELD 112

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                + I  K P   N     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 113 ASVERLPIHKKAPTFDNLSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 172

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +     + K + +V    +E P  R    L
Sbjct: 173 LINNIAQEHSGISVFAGVGERTREGNDLYHEMTDSGVIKQTAMVFGQMNEPPGARLRVAL 232

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I R+  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 233 TGLTMAEYFRDEQGQDVLLFVDNIFRYTQAGSEVSALLGRMPSAVGYQPTLATEMGMLQE 292

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T++ +V V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 293 RI--TSTNKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLSEMGIYPAVDPLA 350

Query: 356 SVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR        +E   +   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 351 STSRALSPEIVGEEHYGVARQVQETLQRYKELQDIIAILGMDELSEED-KLTVHRARRIQ 409

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 410 FFLSQN 415


>gi|183206510|gb|ACC54453.1| ATP synthase beta subunit [Platycodon grandiflorum]
          Length = 488

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 11  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPIHVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDLGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  ++  S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVSDEHYEIAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|170178342|gb|ACB10590.1| ATP synthase beta subunit [Cornus volkensii]
          Length = 455

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMIATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    + +   +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPV-ETRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEDD-RLIVARARKIERFLSQP 395


>gi|119367966|dbj|BAF40441.1| ATP synthase beta subunit [Montrouziera sphaeroidea]
          Length = 489

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEIDVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|94496764|ref|ZP_01303339.1| type III secretion system ATPase [Sphingomonas sp. SKA58]
 gi|94423777|gb|EAT08803.1| type III secretion system ATPase [Sphingomonas sp. SKA58]
          Length = 436

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 159/421 (37%), Positives = 240/421 (57%), Gaps = 10/421 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVV--HQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           Q G +         V+ ++  V +GD             L +V+ ++     + P+G   
Sbjct: 22  QRGKVRGAIGTAIRVSGVT--VRIGDICELASPAGRHSLLAEVVGLSEHEAILSPMGDLR 79

Query: 80  EISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S    V    G  R+  S    GRV++A  +P+DG   + +   S  + +  P  M R
Sbjct: 80  GLSGETEVMVRVGEDRVPVSGALLGRVLDARLQPLDGRPPV-ETPASQPLYAAAPNPMER 138

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           QR+++  +TG+R ID   PL  GQRIGVFA +G GKSTLL   AR    D ++I+L+GER
Sbjct: 139 QRIDRQVETGVRAIDGLLPLGRGQRIGVFAAAGGGKSTLLGTLARQAQADVIVIALIGER 198

Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFIED LG + L +SVV+ +TSD   + R  A   A  IAE F ++G +VLL++D
Sbjct: 199 GREVREFIEDNLGSEGLARSVVIASTSDRPALERARAAHAATAIAEGFRAEGKHVLLLMD 258

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TRFA ++REI   SGE PV RG+P SVF+ELPRL ER G      G IT + +VL++ 
Sbjct: 259 SVTRFARALREIGLASGEPPVRRGFPPSVFAELPRLFERAG--CDACGEITGIYTVLLE- 315

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           +  +DP+ + VRS+LDGH++L+R LA  G YP +D L S SRL  +     E++   S  
Sbjct: 316 EEEDDPVGEEVRSLLDGHVILSRKLAARGHYPAIDILVSQSRLMGQLMEDGERRAALSFR 375

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            ++ + +E   +  +G Y+PG D + D+A+ +   +  FL+QS  + +S  + + I +  
Sbjct: 376 AMLAKLDEIELLLQVGDYKPGQDALADRAIARRDEMDGFLRQSTHETASLPMTRAILRGF 435

Query: 438 Q 438
           +
Sbjct: 436 E 436


>gi|63091885|emb|CAH58794.1| ATP synthase alpha chain [Enterococcus cecorum]
          Length = 367

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   GR  
Sbjct: 1   RAHGL-ENAMSGELLQFSNGS---FGMAQNLESNDVGIIILGDFETIREGDKVKRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGPI-ETTKTRPVEAMAPGVMQRKSVHEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRAQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A S +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVAAGSSQPAPLLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGIRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|61968279|gb|AAX57066.1| ATP synthase beta subunit [Pentabrachion reticulatum]
          Length = 479

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATYSIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EFFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|37720957|gb|AAN32481.1| ATP synthase beta subunit [Cartonema philydroides]
          Length = 489

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|15430308|gb|AAK95912.1| ATP synthase beta subunit [Aiphanes horrida]
          Length = 498

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|157285033|gb|ABV31256.1| ATPase [Vibrio harveyi]
 gi|157285049|gb|ABV31264.1| ATPase [Vibrio harveyi]
 gi|157285097|gb|ABV31288.1| ATPase [Vibrio harveyi]
 gi|157285155|gb|ABV31317.1| ATPase [Vibrio campbellii]
 gi|157285157|gb|ABV31318.1| ATPase [Vibrio rotiferianus]
 gi|157285159|gb|ABV31319.1| ATPase [Vibrio harveyi]
 gi|157285195|gb|ABV31337.1| ATPase [Vibrio harveyi]
 gi|157285223|gb|ABV31351.1| ATPase [Vibrio harveyi]
 gi|157285253|gb|ABV31366.1| ATPase [Vibrio harveyi]
          Length = 441

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|56675904|emb|CAB90001.2| ATP synthase beta subunit [Salacia pallescens]
          Length = 482

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 11  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 71  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|6688708|emb|CAB65231.1| ATP synthase beta subunit [Mentzelia lindleyi]
          Length = 498

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34496127|ref|NP_900342.1| F0F1 ATP synthase subunit beta [Chromobacterium violaceum ATCC
           12472]
 gi|81656847|sp|Q7P095|ATPB_CHRVO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|34101981|gb|AAQ58348.1| H+-transporting two-sector ATPase, beta subunit [Chromobacterium
           violaceum ATCC 12472]
          Length = 465

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +   A   GR+++ LG P+D    +   D
Sbjct: 45  LGDGVVRTIAMGSSDGLKRGMAVANTGAPISVPVGAATLGRIMDVLGNPVDEAGPV-ATD 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 ARRAIHQAAPKFDELSAAADILETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           T+AE+F  + D         L +D+I R+  +  E++   G +P A GY  ++  E+ RL
Sbjct: 224 TMAEHFRDEKDENGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 283

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 284 QERI--TSTKDGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDP 341

Query: 354 LASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR  D     DE   +   +   + R++E RDI  I G     +      V +   
Sbjct: 342 LDSTSRQLDPLVVGDEHYTVARGVQSTLQRYKELRDIIAILGMDELSEED-KLVVARARK 400

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 401 IQRFLSQP 408


>gi|27364454|ref|NP_759982.1| F0F1 ATP synthase subunit beta [Vibrio vulnificus CMCP6]
 gi|37681435|ref|NP_936044.1| F0F1 ATP synthase subunit beta [Vibrio vulnificus YJ016]
 gi|320154858|ref|YP_004187237.1| ATP synthase subunit beta [Vibrio vulnificus MO6-24/O]
 gi|81756325|sp|Q7MGI0|ATPB_VIBVY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81844741|sp|Q8DDG8|ATPB_VIBVU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27360573|gb|AAO09509.1| ATP synthase F1, beta subunit [Vibrio vulnificus CMCP6]
 gi|37200187|dbj|BAC96015.1| F0F1-type ATP synthase, beta subunit [Vibrio vulnificus YJ016]
 gi|319930170|gb|ADV85034.1| ATP synthase beta chain [Vibrio vulnificus MO6-24/O]
          Length = 467

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 183/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +  +      + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSDVPSVYDALNVKDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  +L   I    P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEL-YSIHRPAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYHEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +       +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDTARGVQQTLQRYKELKDIIAILGMDELSESD-KQVVARARKIERFLTQP 411


>gi|63091915|emb|CAH58812.1| ATP synthase alpha chain [Enterococcus cecorum]
          Length = 367

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   GR  
Sbjct: 1   RAHGL-ENAMSGELLQFSNGS---FGMAQNLESNDVGIIILGDFETIREGDKVKRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGPI-ETTKTRPVEAMAPGVMQRKSVHEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQGMICIYVAIGQKDSTVRAQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A S +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVAAGSSQPAPLLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGIRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|227874106|ref|ZP_03992312.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
 gi|227840018|gb|EEJ50442.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268]
          Length = 463

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/409 (28%), Positives = 196/409 (47%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +Q G I  +      V  + +    +   +V          +V   +  + V    +   
Sbjct: 1   MQTGKIVQVMGPVVDVEFMEAPLPKIKTAMVVDNHGVTGTMEVAEHLGENTVRCIMLAPS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N LG+ IDG D +  G+   EI  K P  ++
Sbjct: 61  EGLERDMEVRSTGKGISVPVGEQTLGRLFNVLGETIDGKDPITDGE-EWEIHRKPPAFVD 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +  V++  +TGI+VID+  P   G ++G+F G+G+GK+ L+    R+   +    S+   
Sbjct: 120 QSPVQEVLETGIKVIDLIAPYAKGGKVGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
           VGER RE  +   +      +K + +V    +ESP  R     T +T+AEYF   +  +V
Sbjct: 180 VGERSREGNDLYMEMTESGVIKNTALVFGQMNESPGARMRVAETGLTMAEYFRDVQKKDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E+++  G +P A GY  ++ SE+ +L ERI     ++G++T+V +
Sbjct: 240 LLFIDNIFRFVQAGSEVSSLLGRMPSAVGYQPTLASEMGQLQERIA--STKEGSVTSVQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKK 371
           V V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR L +     +   
Sbjct: 298 VYVPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEESIVGKEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              S+  ++ +++E +DI  I G     +      V++   I +FL Q 
Sbjct: 358 TAQSVLQILQKYKELQDIIAILGMEELSEED-KLLVYRARKIRNFLSQP 405


>gi|170178330|gb|ACB10584.1| ATP synthase beta subunit [Cornus peruviana]
          Length = 455

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +     +  G  V   G    +       GR
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATAGLMRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|37720955|gb|AAN32480.1| ATP synthase beta subunit [Ananas comosus]
          Length = 490

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+N   +GQ I +  ++        V    +   + 
Sbjct: 27  IGPVLDVVFPPGKMPNIYNALVVKGRN--TVGQQINVTCEVQQLLGNNRVRAVAMSATDG 84

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 85  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLD 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 144 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 203

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 204 ERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 263

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 264 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 322 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 382 EEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633323|gb|AAM52136.1| ATP synthase beta subunit [Calystegia macrostegia]
          Length = 490

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 186/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVINTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRI 377

Query: 366 SADE-KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +E  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEQYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|293977774|ref|YP_003543204.1| proton translocating ATP synthase, F1 subunit alpha [Candidatus
           Sulcia muelleri DMIN]
 gi|292667705|gb|ADE35340.1| proton translocating ATP synthase, F1 alpha subunit [Candidatus
           Sulcia muelleri DMIN]
          Length = 526

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/421 (24%), Positives = 167/421 (39%), Gaps = 36/421 (8%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L      G+ VV +       G V+ +  + V I  +G  + I  GD V   
Sbjct: 37  DGVANVYGL-FNAKYGEIVVFENG---LKGIVLNLEEENVGIILIGSSKGIKEGDKVIRT 92

Query: 91  GRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G    I+   C  GRVIN+LG PIDG   +      M +  K P  + R+ V +  +TGI
Sbjct: 93  GMISSINVGECMLGRVINSLGVPIDGKGPIYGNLFLMPLERKAPGVIYREPVIEPLQTGI 152

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVIISLVGERGREV 202
           + ID   P+  GQR  +      GK+TL      +             I   +G++   +
Sbjct: 153 KCIDSMIPIGRGQRELIIGDRQTGKTTLAIDTIINQKKFYDMGNPVYCIYVSIGKKASTI 212

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
              ++     D L  +V++ A + +S  ++  AP +   I E+F   G + L+I D +++
Sbjct: 213 ASIVKLLEENDALSYTVILTANASDSAAMQVFAPFSGTAIGEFFRDTGRSALIIYDDLSK 272

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE------------------ 303
            A + REI+      P    YP  +F    RLLER      +                  
Sbjct: 273 QAVAYREISLLLRRPPGREAYPGDIFYLHSRLLERSSKIISDNKIASKMNDVPKSIEKKI 332

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++T++  +     + +  I  +V SI DG I L  +L   G  P ++   SVSR+ 
Sbjct: 333 LGGGSLTSLPIIETQFGDVSSYIPTNVISITDGQIFLETNLFNSGIRPAINSGISVSRVG 392

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     KK+  +      +F E         +   +D      + +     + LKQS 
Sbjct: 393 ASAQIKSMKKISGTFKLDQAQFRELE---SFSQFGSDLDSTTKNIIEKGKRNIEILKQSI 449

Query: 422 S 422
           +
Sbjct: 450 N 450


>gi|188535583|ref|YP_001909380.1| F0F1 ATP synthase subunit beta [Erwinia tasmaniensis Et1/99]
 gi|226740200|sp|B2VCA4|ATPB_ERWT9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|188030625|emb|CAO98521.1| ATP synthase, F1 complex, beta subunit [Erwinia tasmaniensis
           Et1/99]
          Length = 460

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSS 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G + V       +       GR++N LG+PID    +G+ +    I    P   +
Sbjct: 61  DGLKRGLETVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEE-RWAIHRSAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +   +   +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 QSNSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLSQP 404


>gi|110915596|gb|ABH02586.1| ATP synthase beta subunit [Brachypodium pinnatum]
          Length = 490

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q  ++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSIDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMRESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|157285207|gb|ABV31343.1| ATPase [Vibrio brasiliensis]
 gi|157285235|gb|ABV31357.1| ATPase [Vibrio brasiliensis]
          Length = 441

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|75336630|sp|Q9MU41|ATPB_MAGTR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688025|emb|CAB89718.1| ATP synthase beta subunit [Magnolia tripetala]
          Length = 498

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|261213283|ref|ZP_05927565.1| ATP synthase beta chain [Vibrio sp. RC341]
 gi|262190641|ref|ZP_06048876.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93]
 gi|262402102|ref|ZP_06078666.1| ATP synthase beta chain [Vibrio sp. RC586]
 gi|260837557|gb|EEX64260.1| ATP synthase beta chain [Vibrio sp. RC341]
 gi|262033479|gb|EEY51982.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93]
 gi|262351748|gb|EEZ00880.1| ATP synthase beta chain [Vibrio sp. RC586]
          Length = 467

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 181/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V   K    L    ++   ++    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I    P    
Sbjct: 61  DGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEV-YSIHRPAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +     +         K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDVARGVQATLQRYKELKDIIAILGMDELSEAD-KQVVARARKIERFLTQP 411


>gi|251793675|ref|YP_003008405.1| ATP synthase F1 subunit beta [Aggregatibacter aphrophilus NJ8700]
 gi|247535072|gb|ACS98318.1| ATP synthase F1, beta subunit [Aggregatibacter aphrophilus NJ8700]
          Length = 457

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQLG--GGVVRCIALGASD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V +  +   +       GR++N LG+PID    +G  +    I    P    +
Sbjct: 59  GLKRSLSVENTNKPISVPVGVKTLGRIMNVLGEPIDERGPIGAEE-EWAIHRSAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|224830494|gb|ACN66342.1| ATP synthase beta chain [Calycocarpum lyonii]
          Length = 489

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|154276988|ref|XP_001539339.1| ATP synthase beta chain, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150414412|gb|EDN09777.1| ATP synthase beta chain, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 522

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 183/431 (42%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
            Q G I  +      V      +   L       G     L     +  ++V    +   
Sbjct: 50  AQSGKIHQVIGAVVDVKFDGDQLPSILNALETTNGGQKLVLEVAQHLGENVVRTIAMDGT 109

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G    I       GR++N  G PID    + K  +   I ++ P  + 
Sbjct: 110 EGLVRGAPVTDTGAPIMIPVGPGTLGRIMNVTGDPIDERGPI-KHTMKAPIHAEAPEYVE 168

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   
Sbjct: 169 QATSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG 228

Query: 195 VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           VGER RE  +   +         D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 229 VGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDE 288

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +   KG+I
Sbjct: 289 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSI 346

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     
Sbjct: 347 TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVG 406

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   + + +  ++  ++  +DI  I G     +      V +   +  FL Q     + 
Sbjct: 407 EEHYNVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQP---FTV 462

Query: 427 EDVFQEITKKL 437
             VF  I  KL
Sbjct: 463 AQVFTGIEGKL 473


>gi|63091869|emb|CAH58785.1| ATP synthase alpha chain [Enterococcus malodoratus]
          Length = 367

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIVLGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG     +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDNMIGRVVNPLGQPIDGMGPF-ETSKTRPVEAMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKESTVRSQVETLRK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +  ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGAMDYTIVVTAGASQPAPLLFIAPYAGTAMGEEFMYNGKHVLVVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYAGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|7708576|emb|CAB89978.1| ATP synthase beta subunit [Rhodohypoxis milloides]
          Length = 493

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRALA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF H+  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVHAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|307931026|dbj|BAJ21374.1| ATP synthase CF1 alpha subunit [Pedinophyceae sp. YPF-701]
          Length = 363

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 154/365 (42%), Gaps = 11/365 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            +  L + V  G+ +         +G  + +    V    +G G  I  G  V   G+  
Sbjct: 1   RIYGLEK-VMAGELLEFADG---TIGIALNLESKNVGAVLMGEGRSIQEGSSVSATGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I     + GRV+NAL +PIDG   +   +  + I S  P  ++R+ V +   TG+  ID
Sbjct: 57  QIPVGDAYLGRVVNALAQPIDGKGDIAATETRL-IESPAPGIISRRSVHEPLSTGLVAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+ +      +        +   +G++   + + +     
Sbjct: 116 AMIPIGRGQRELIIGDRQTGKTAIAVDTILNQKGKDVICVYVAIGQKASSIAQVVNTLEE 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 S++V AT+D    L+ +AP T  T+AEYF   G + L+I D +T+ A + RE++
Sbjct: 176 RGAMDYSIIVAATADTPATLQYLAPYTGATLAEYFMYTGRHTLVIYDDLTKQAQAYREMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER          G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGSGSMTALPVVETQEGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  L   G  P ++   SVSR+   A     K++   L   + +F E   
Sbjct: 296 ISITDGQIFLSADLFNSGLRPAINVGISVSRVGSAAQPKAMKQVAGKLKLELAQFAELEA 355

Query: 389 IRLIG 393
                
Sbjct: 356 FAQFA 360


>gi|42559040|gb|AAS20206.1| ATP synthase beta subunit [Carludovica drudei]
          Length = 489

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910904|gb|ABI48184.1| ATPase beta subunit [Heterophyllium affine]
          Length = 472

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|37721003|gb|AAN32504.1| ATP synthase beta subunit [Sisyrinchium montanum]
          Length = 495

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFTPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 LFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|6467940|gb|AAF13239.1|AF197606_1 ATPase beta subunit [Mauloutchia chapelieri]
          Length = 487

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|18033075|gb|AAL56979.1|AF326331_1 ATP synthase [Pasteurella canis]
          Length = 431

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/371 (28%), Positives = 174/371 (46%), Gaps = 14/371 (3%)

Query: 60  GQVIR----INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           G V+     +   IV    +G  + +  G  V +      +       GR++N LG+PID
Sbjct: 24  GLVLEVQQQLGGGIVRCIAMGSSDGLKRGLTVTNTNSPISVPVGTKTLGRIMNVLGEPID 83

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +G  + +  I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK
Sbjct: 84  EQGPIGAEE-NWSIHRAPPSYEEQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGK 142

Query: 175 STLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           +  +    R+   +     + + VGER RE  +F  +    N+  K   V    +E P  
Sbjct: 143 TVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSPVYGQMNEPPGN 202

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+
Sbjct: 203 RLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 262

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP 
Sbjct: 263 GVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPA 320

Query: 351 VDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR  D     +E   +   +   + R++E +DI  I G     +      V +
Sbjct: 321 VDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILGMDELSEDD-KLVVAR 379

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 380 ARKIERFLSQP 390


>gi|15430312|gb|AAK95914.1| ATP synthase beta subunit [Desmoncus orthacanthos]
          Length = 498

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633287|gb|AAM52118.1| ATP synthase beta subunit [Turbina oenotheroides]
          Length = 490

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      VT    +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVTFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|14587181|gb|AAK70491.1| ATP synthase beta subunit [Pontederia cordata]
          Length = 485

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRVAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGXLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|7708660|emb|CAB89992.1| ATP synthase beta subunit [Stemona japonica]
          Length = 497

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D   Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 49  KGRDTAAQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 109 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 167

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 168 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 227

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 228 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 287

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 288 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 345

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 346 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 405

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 406 ILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|75336398|sp|Q9MRI8|ATPB_GALBE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687978|emb|CAB89711.1| ATP synthase beta subunit [Galbulimima belgraveana]
          Length = 498

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|303239773|ref|ZP_07326297.1| ATP synthase F1, beta subunit [Acetivibrio cellulolyticus CD2]
 gi|302592710|gb|EFL62434.1| ATP synthase F1, beta subunit [Acetivibrio cellulolyticus CD2]
          Length = 464

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 13/411 (3%)

Query: 19  LVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVG 76
           +V   G I  +      V         + + +  + +    + +VI+ +  D V    + 
Sbjct: 1   MVQNKGKIIQVIGPVLDVRFERGSLPKIYNAIEIEVEGKKVVAEVIQYVGNDTVRCISMA 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG P+D    + K +  + I    P  
Sbjct: 61  ASDGLMRGMDAIDTGNPIMVPVGKEVLGRLFNVLGDPVDNMGEV-KTEKRLPIHRPAPVL 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
            + +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+ 
Sbjct: 120 EDLKPATEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVF 179

Query: 195 --VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   D      ++K+ +V    +E P  R    L+ +T+AEYF  +   
Sbjct: 180 TGVGERTREGNDLWNDMNDSGVIEKTALVFGQMNEPPGSRMRVGLSGLTMAEYFRDEMGQ 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT+V
Sbjct: 240 DVLLFIDNIFRFVQAGSEVSALLGRVPSAVGYQPTLATDVGALQERI--TSTRKGSITSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ D      + 
Sbjct: 298 QAVYVPADDLTDPAPATTFAHLDATTVLSRQIVEQGIYPAVDPLDSTSRVLDPSVVGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            K+   +  ++ R++E +DI  I G     D      V +   I  +L Q 
Sbjct: 358 YKVARRVQEILQRYKELQDIIAILGLEELADED-KLTVFRARKIQRYLSQP 407


>gi|284999825|dbj|BAI67813.1| ATP synthase beta-subunit [Asterococcus korschikoffii]
          Length = 376

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    + K D ++ I  K
Sbjct: 1   VAMNATEGLQRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNLGPV-KTDQTLPIHRK 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    L+A+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALSALT 179

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNGQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPSTTFVHLDATTVLSRNLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGDKHYNCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLVVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|12004163|gb|AAG43921.1|AF213790_1 ATP synthase beta subunit [Trientalis europaea]
          Length = 468

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMETKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLPVARARKIERFLSQP 434


>gi|224830552|gb|ACN66371.1| ATP synthase beta chain [Odontocarya tripetala]
          Length = 486

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|110915648|gb|ABH02612.1| ATP synthase beta subunit [Graphephorum wolfii]
          Length = 474

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 36  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 95

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 96  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 154

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 155 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 214

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 215 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 274

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 275 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 332

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 333 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 392

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 393 D-RLTVARARKIERFLSQP 410


>gi|61968227|gb|AAX57040.1| ATP synthase beta subunit [Bridelia ferruginea]
          Length = 479

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGRDTAGQQINVTCEVQQLVGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDDLGPVD-TRATYPIHRSAPAFIELDTELSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSGVINKENIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +           +   S+   + R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGTKHYETAQSVKQTLQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|21684887|emb|CAD11570.1| ATP synthase beta subunit [Mesanthemum sp. van der Werff and
           McPherson 13574]
          Length = 464

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            +  + + +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 22  NQQINVICEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGSPLSVPVGGTTLGRIFNVLG 81

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
            PID    +     S  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 82  DPIDNLGPVDPSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 140

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 141 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNLAESKVAL 200

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 201 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 260

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 261 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 318

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 319 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDE 378

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 379 LSEED-RLTVARARKIERFLSQP 400


>gi|14718005|gb|AAK72744.1| ATP synthase beta subunit [Chrysolepis sempervirens]
          Length = 470

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      VT   + +       VV   K  D  GQ I +  ++        V   
Sbjct: 8   GRIAQIIGPVLDVTFPPRKMPNIYNALVV---KGRDIAGQQINVTCEVQQLLGNNRVRAV 64

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 65  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 123

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 124 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 183

Query: 193 SLVGERGREVREF---IEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G  G   RE      +               K  +V    +E P  R    LTA+T+
Sbjct: 184 SVFGGVGERTREGNDPYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 243

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 244 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 302 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 361

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 362 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLPVARARKIERFLSQ 420

Query: 420 S 420
            
Sbjct: 421 P 421


>gi|3850932|gb|AAC72158.1| ATP synthase beta subunit [Protea neriifolia]
          Length = 490

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P++    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVENLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6467939|gb|AAF13238.1|AF197605_1 ATPase beta subunit [Chimonanthus praecox]
          Length = 487

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|62902865|gb|AAY19347.1| ATP synthase beta subunit [Humiria balsamifera]
          Length = 479

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLPPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLYSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|220936460|ref|YP_002515359.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sp. HL-EbGR7]
 gi|254808172|sp|B8GRB8|ATPB_THISH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219997770|gb|ACL74372.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sp. HL-EbGR7]
          Length = 459

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +    +   L    ++   +V    +G  + 
Sbjct: 1   MSAGNIVEIIGAVVDVEFPRDAVPNVYDALRVEDSGLTLEVQQQLGDGVVRTIAMGSTDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GRV++ LG P+D    + + +    I    P    + 
Sbjct: 61  MRRGVTVANTGAPISVPVGKGTLGRVMDVLGNPVDNAGDV-QTEERWSIHRPAPSFDEQA 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + VG
Sbjct: 120 GSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL+ 
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V
Sbjct: 240 IDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D      +      
Sbjct: 298 PADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPQVIGNEHYDTAR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++ + + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 AVQNTLQRYKELKDIIAILGMDELSEDD-KLIVARARKIQRFLSQP 402


>gi|124361752|gb|ABN09318.1| ATP synthase beta subunit [Diospyros vestita]
          Length = 451

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|21633373|gb|AAM52161.1| ATP synthase beta subunit [Cressa depressa]
          Length = 486

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/416 (25%), Positives = 181/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V      +  + + +V QG++++ +    +V +I  +  V    +   
Sbjct: 17  GRIVQIIGPVLDVAFPPGKMPYIYNALVVQGRDNEQMNVTCEVQQILGNNRVRAVAMSDT 76

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 77  DGLMRGMEVIDTGVSISVPVGGATLGRIFNVLGEPVDKLGPVD-TKTTSPIHRSAPAFIX 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 136 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTELIMELINNIAKAHGGVSVFGG 195

Query: 198 RGREV---REFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            G       +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 196 XGERTPEGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 255

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 256 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 314 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 373

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 VGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|215488979|ref|YP_002331410.1| translocator EscN [Escherichia coli O127:H6 str. E2348/69]
 gi|2865290|gb|AAC38383.1| EscN [Escherichia coli]
 gi|215267051|emb|CAS11496.1| translocator EscN [Escherichia coli O127:H6 str. E2348/69]
          Length = 446

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 157/409 (38%), Positives = 229/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I +I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKIINIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 88

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+I+ +G+P++ +           + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGDEFKIRVGDALLGRLIDGIGRPMESNIVAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+    +I +F++QS  D+SS +
Sbjct: 387 IATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYE 435


>gi|323715508|gb|ADY04822.1| ATP synthase beta subunit [Gentiana saponaria]
          Length = 483

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 35  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 95  IFNVLGEPVDNLGPVDTRTIS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 153

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 154 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINQENIA 213

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 214 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 274 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 332 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 391

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 392 ILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|302306746|ref|NP_983117.2| ABR169Wp [Ashbya gossypii ATCC 10895]
 gi|299788666|gb|AAS50941.2| ABR169Wp [Ashbya gossypii ATCC 10895]
          Length = 505

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 186/432 (43%), Gaps = 21/432 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
               G + ++      V          L    ++       L     +  + V    +  
Sbjct: 34  AASEGKVRAVIGAVVDVQFEQGNLPAILNALEINTADGKLVLEVAQHLGENTVRTIAMDG 93

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G+ V   G    I       GR++N +G PID    +      M I +  P  +
Sbjct: 94  TEGLVRGERVVDTGAPISIPVGRETLGRILNVVGDPIDERGPIN-SKTRMPIHADPPAYV 152

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
            +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+  
Sbjct: 153 EQSTEAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFT 212

Query: 195 -VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  
Sbjct: 213 GVGERTREGNDLYREMRETGVINLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRD 272

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+
Sbjct: 273 EEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGS 330

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D +  
Sbjct: 331 VTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVV 390

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   + + +   +  ++  +DI  I G     +      V +   I  FL Q     +
Sbjct: 391 GQEHYDVATKVQQTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FA 446

Query: 426 SEDVFQEITKKL 437
             +VF  I  +L
Sbjct: 447 VAEVFTGIPGRL 458


>gi|262371347|ref|ZP_06064665.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
 gi|262313684|gb|EEY94733.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046]
          Length = 464

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 189/430 (43%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERNSVPKIYDALHVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +      +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLNVTNTNAPISVPVGTATLGRIMDVLGRPIDEAGPV-ATEARLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGA 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  S+ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARSVQNVLQRYKELKDIIAILGMDELAEED-KLTVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|219552266|gb|ACL26848.1| ATP synthase beta chain [Flueggea virosa]
          Length = 423

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 30  KGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 90  IFNVLGEPVDELGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 148

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 149 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 209 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 268

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 269 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 326

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 327 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 386

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 387 ILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|158602285|gb|ABW74609.1| ATP synthase beta subunit [Ficaria verna]
          Length = 486

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|194267373|gb|ACF35672.1| ATP synthase beta subunit [Lasjia claudiensis]
          Length = 483

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQIDVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLATKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|78356032|ref|YP_387481.1| F0F1 ATP synthase subunit beta [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|118573527|sp|Q313W0|ATPB_DESDG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78218437|gb|ABB37786.1| ATP synthase F1 subcomplex beta subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 470

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 192/410 (46%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSD---NLGQV-IRINLDIVYICPVGI 77
           G I+ +      V      +   L   V+    N+D    + +V   +  ++V    +  
Sbjct: 5   GKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDA 64

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +   +   GR++N +G+P+D    +     S+ I    P   
Sbjct: 65  TEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAK-SLPIHRPAPEFN 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         + +
Sbjct: 124 EQNTNVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +     + +K+ +V    +E P  R    LTA+  AEYF  +   +
Sbjct: 184 GVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALACAEYFRDEENQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V 
Sbjct: 244 VLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERI--TSTTKGSITSVQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D     A+  
Sbjct: 302 AVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ ++++ +DI  I G     D    + V +   I  FL Q 
Sbjct: 362 SVAREVQMVLQKYKDLQDIIAILGMDELSDED-KQTVARARRIQRFLSQP 410


>gi|312884802|ref|ZP_07744494.1| flagellum-specific ATP synthase FliI [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367454|gb|EFP95014.1| flagellum-specific ATP synthase FliI [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 447

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 150/422 (35%), Positives = 236/422 (55%), Gaps = 10/422 (2%)

Query: 26  ISSITSVYYTVTCL-----SQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGE 79
           ++ +T     V  L          L    + +    + +  QV+  + +I Y+ P+    
Sbjct: 26  VAKVTGRLVKVNGLMLQAVGCRFKLEQRCMVETAEGNMIEAQVVGFDHNIAYLMPIRRLG 85

Query: 80  EISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V    G   +  S  W GRV++ LG P+D D  +  G+  + +  +    + R
Sbjct: 86  GLFAGAKVIPLDGDSTVQLSDKWLGRVLDGLGHPLDDDGKIIGGE-RVSLEPRRINPLKR 144

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
           + V+     GI+ I+    +  GQRIG+ AGSG+GKS LL M  ++   D +++ L+GER
Sbjct: 145 RPVDTPLNVGIKAINGLITVGKGQRIGLMAGSGVGKSILLGMMCKNTEADVIVVGLIGER 204

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI ++   +   K+V++ A +DESP++R  A L    +AEYF  KG +VLL++D
Sbjct: 205 GREVREFIEKNLTPEARAKAVIIAAPADESPLMRLKATLLCHRVAEYFRDKGKDVLLMMD 264

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A + REIA + GE P  RGYP SVF+ LP+LLER G +E  +G++TA+ ++L   
Sbjct: 265 SLTRYAMAQREIALSLGEPPATRGYPPSVFNILPQLLERAGNAENPQGSLTAIYTILAVS 324

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+  DP+ DS R+ILDGHIVL+R LAE+G YP +D  AS+SR            L S   
Sbjct: 325 DDQQDPVVDSARAILDGHIVLSRHLAEQGHYPAIDINASISRCMGTCVETAHLTLASEFR 384

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQEITKK 436
                + + +D+  +GGY+PG D  LD++V   PI+ ++LKQ  +  ++  +   E+   
Sbjct: 385 RHYSAYLQVKDLIPLGGYQPGQDPELDRSVGLYPILSEYLKQPQNSSVNYHESLVELANI 444

Query: 437 LQ 438
            +
Sbjct: 445 FK 446


>gi|224830484|gb|ACN66337.1| ATP synthase beta chain [Anamirta cocculus]
          Length = 488

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|110915630|gb|ABH02603.1| ATP synthase beta subunit [Dupontia fisheri]
          Length = 474

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 36  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 95

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 96  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 154

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 155 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 214

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 215 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 274

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 275 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 332

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 333 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 392

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 393 D-RLTVARARKIERFLSQP 410


>gi|124361698|gb|ABN09291.1| ATP synthase beta subunit [Diospyros mannii]
          Length = 453

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|75336641|sp|Q9MU82|ATPB_CALUS RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582344|gb|AAF64287.1| ATP synthase beta subunit [Calamus usitatus]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVEG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718130|gb|AAK72804.1| ATP synthase beta subunit [Milligania stylosa]
          Length = 491

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|116618945|ref|YP_819316.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431390|ref|ZP_03913441.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122270855|sp|Q03V29|ATPB_LEUMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28193535|emb|CAD48595.1| F1F0-ATPase subunit beta [Leuconostoc mesenteroides subsp.
           mesenteroides]
 gi|116097792|gb|ABJ62943.1| ATP synthase F1 subcomplex beta subunit [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|227352853|gb|EEJ43028.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 466

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/394 (27%), Positives = 181/394 (45%), Gaps = 14/394 (3%)

Query: 48  FVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
            V+ +G       +V + +   +V    +   + +  G  V   G    +       GRV
Sbjct: 31  LVIDKGNGQSLTVEVSLALGDGVVRTIAMDSTDGLQRGMGVVDTGNPIEVPVGEATLGRV 90

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D + ++        I    P         +  +TGI+VID+  P   G +IG
Sbjct: 91  FNVLGEPVDNNGAIASDVRRSSIHRDAPKYDELTSSTEILETGIKVIDLLAPYVRGGKIG 150

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK-SVVVV 221
           +F G+G+GK+ L+     +       IS+   VGER RE  +   +     + K + +V 
Sbjct: 151 LFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMEESGVLKQTAMVY 210

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +T+AE F      +VLL +D+I RF  +  E++   G +P A 
Sbjct: 211 GQMNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 270

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L R
Sbjct: 271 GYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLER 328

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           +L ++G YP VDPLAS S   D      +  ++ + +   + R+ E +DI  I G     
Sbjct: 329 ALTQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDIISILGMDELS 388

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
           D      V++   I  FL Q     S  + F  I
Sbjct: 389 DEE-KTTVNRARRIQFFLSQP---FSVAETFTGI 418


>gi|308051489|ref|YP_003915055.1| ATP synthase F1, alpha subunit [Ferrimonas balearica DSM 9799]
 gi|307633679|gb|ADN77981.1| ATP synthase F1, alpha subunit [Ferrimonas balearica DSM 9799]
          Length = 513

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 98/443 (22%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +   +           G I S++     +  L+  V  G+ +   G  
Sbjct: 1   MQLNSTEISELIKSRIEQFNVVSEARNEGTIVSVSDGIVRIHGLAD-VMQGEMIELPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG+ ID
Sbjct: 58  -NRFAIALNLERDSVGAVVMGPYADLAEGVKVKSTGRILEVPVGRGLLGRVVNTLGEAID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   D    +    P  ++R+ V +  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPID-NDGFAPVEVIAPGVIDREGVSQPVQTGYKSVDAMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +      +  D   K +   +G++   +   +         + ++VVVA++ E+  L+
Sbjct: 176 TAMAIDAIINQRDSGIKCVYVAIGQKASTIANVVRKLEEHGALQNTIVVVASASEAAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER              G  + + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERASRVNAEYVERFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 356 ETNLFNAGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 412

Query: 399 VDLILDKAVHQVPIIYDFLKQSP 421
           +D      +     + + +KQ  
Sbjct: 413 LDDATRAQLEHGERVTELMKQKQ 435


>gi|110915674|gb|ABH02625.1| ATP synthase beta subunit [Parafestuca albida]
          Length = 473

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 35  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 94

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 95  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 153

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 154 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 213

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 214 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 273

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 274 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 331

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 332 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 391

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 392 D-RLTVARARKIERFLSQP 409


>gi|34539383|gb|AAQ74575.1| F1-ATPase alpha subunit [Neolitsea cassia]
          Length = 417

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 89/412 (21%), Positives = 164/412 (39%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGEXVEFX---SGVKGIALNLENENVGIVVXGSDTVIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV++A   PIDG  +L   +    +  K    + R+ V +  +
Sbjct: 57  KRTGSIVDVPAGKAMLGRVVDAXXVPIDGRGALSDHE-RRRVEVKALGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILPESNALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D       ++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 404


>gi|21633315|gb|AAM52132.1| ATP synthase beta subunit [Operculina sp. Romero 1701]
          Length = 490

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V    S+   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPSKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMGVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER  E  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTXEGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62902847|gb|AAY19338.1| ATP synthase beta subunit [Zinowiewia concinna]
          Length = 488

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGNQINVVCEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLMRGMEVIDAGAPLSVPVGGATLGRIFNVLGEPVDNLGPVN-TRTTSPIHKSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|62902808|gb|AAY19319.1| ATP synthase beta subunit [Dicarpellum pancheri]
          Length = 488

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLETQLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|62085137|gb|AAX62974.1| ATP synthase beta subunit [Heywoodia lucens]
          Length = 482

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|32480850|ref|NP_862761.1| ATP synthase CF1 beta subunit [Calycanthus floridus var. glaucus]
 gi|75327712|sp|Q7YJW5|ATPB_CALFG RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|32399386|emb|CAD28728.1| ATPase beta subunit [Calycanthus floridus var. glaucus]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|329847480|ref|ZP_08262508.1| ATP synthase F1, beta subunit [Asticcacaulis biprosthecum C19]
 gi|328842543|gb|EGF92112.1| ATP synthase F1, beta subunit [Asticcacaulis biprosthecum C19]
          Length = 482

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 182/422 (43%), Gaps = 23/422 (5%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYI 72
           + + V  G IS I      V        + + +      S     V+     +  + V  
Sbjct: 5   QKISVATGRISQIIGAVVDVEFDGALPSILNALETTNTASGTR-LVLEVAQHLGENTVRT 63

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G    +       GR++N +G+PID    +     +  I + 
Sbjct: 64  IAMDATEGLVRGQPVKDLGMPITVPVGPATLGRIMNVIGEPIDEAGPIETTFFN-PIHAD 122

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P   ++    +   TGI+VID+  P   G ++G+F G+G+GK+  +     +       
Sbjct: 123 APAFADQATSAELLVTGIKVIDLICPYAKGGKVGLFGGAGVGKTVTIQELINNIAKAYGG 182

Query: 191 --IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   + +        G    +  +V    +E P  R    LT + 
Sbjct: 183 YSVFAGVGERTREGNDLYHEMIESNVNQKGGGGTSRCTLVYGQMNEPPGARARVALTGLA 242

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ RL ERI  
Sbjct: 243 QAEYFRDVEGKDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGRLQERI-- 300

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +   KG+IT+V +V V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR
Sbjct: 301 TSTNKGSITSVQAVYVPADDLTDPAPANSFAHLDATTVLSRSIAEQGIYPAVDPLDSTSR 360

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           + D      +     + +  ++ +++  +DI  I G     +      V +   I  F+ 
Sbjct: 361 ILDPRVVGQEHYDTATRVQEILQQYKALKDIIAILGMDELSEED-KSTVARARKIQRFMS 419

Query: 419 QS 420
           Q 
Sbjct: 420 QP 421


>gi|118917392|dbj|BAF40499.1| ATP synthase beta subunit [Sauvagesia africana]
          Length = 488

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G   D  GQ + +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVIFPPGKMPNIYNALVVKG--RDTAGQQLNVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|148554211|ref|YP_001261793.1| FliI/YscN family ATPase [Sphingomonas wittichii RW1]
 gi|148499401|gb|ABQ67655.1| ATPase, FliI/YscN family [Sphingomonas wittichii RW1]
          Length = 432

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 219/422 (51%), Gaps = 10/422 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
            + G ++S   +    T     V     V+        L +V+    +   +  +     
Sbjct: 13  RRIGRLASYDGLMLEATGFPMPVGSNARVI-DADGHAALAEVVGFRGNRTLLMALDADAP 71

Query: 81  ISLGDLV---FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
            S G  V      G   +       GRV++ALG PIDG   +   +    +  +    ++
Sbjct: 72  HSAGARVEPDRRGGS--VDVGETLLGRVMDALGNPIDGLGPIATAE-RWPLAGRRGNPLD 128

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R RV + F  G+R I+       GQRI + AGSG+GKS L+         D +++ LVGE
Sbjct: 129 RARVTEPFDMGVRAINALLTAGVGQRIAIAAGSGVGKSVLMGQMIAGADADIIVVGLVGE 188

Query: 198 RGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R REV +F+     G   +KSVVV   +D  P+LR  A + A  IAEYF ++G  VLL++
Sbjct: 189 RSREVSDFLATKLAGPVRQKSVVVAVPADHPPVLRLRAAMRATAIAEYFRAQGKRVLLLI 248

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR AH+ REI  + GE P  +GYP S    +PRL+ER G      G+ITA+ +VL D
Sbjct: 249 DSLTRVAHAQREIGLSLGEPPTMKGYPPSALGLIPRLIERAGVDAHSGGSITALYTVLAD 308

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+ +DPI D+ R+I+DGHI+L+RSLAE+G +P +D   S+SR+     + + ++    L
Sbjct: 309 GDDTDDPIVDTARAIVDGHIILSRSLAEQGVFPAIDVGKSLSRVMSDIVTPEHQQAAQIL 368

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
             L   +EE RD+ L+G YR G D I+D A+ +   I +F+ Q   D    D  Q +   
Sbjct: 369 RRLWAVYEENRDLILMGAYRAGSDPIVDVAIARHDHILEFISQGQKDR--IDYAQSVQAL 426

Query: 437 LQ 438
           L+
Sbjct: 427 LE 428


>gi|12004123|gb|AAG43901.1|AF213770_1 ATP synthase beta subunit [Coris monspeliensis]
          Length = 487

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLHMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20269412|gb|AAM17933.1| ATP synthase beta subunit [Fouquieria sp. Anderberg s.n.]
          Length = 469

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 28/420 (6%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GG +  I  V        +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GGIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVSDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVGERGREVREF-----------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G   RE            + +       K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMAIQESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|1827812|pdb|1COW|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827813|pdb|1COW|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1827814|pdb|1COW|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B
 gi|1942371|pdb|1EFR|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942372|pdb|1EFR|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1942373|pdb|1EFR|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The Peptide
           Antibiotic Efrapeptin
 gi|1943083|pdb|1BMF|D Chain D, Bovine Mitochondrial F1-Atpase
 gi|1943084|pdb|1BMF|E Chain E, Bovine Mitochondrial F1-Atpase
 gi|1943085|pdb|1BMF|F Chain F, Bovine Mitochondrial F1-Atpase
 gi|6573683|pdb|1QO1|D Chain D, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573684|pdb|1QO1|E Chain E, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|6573685|pdb|1QO1|F Chain F, Molecular Architecture Of The Rotary Motor In Atp Synthase
           From Yeast Mitochondria
 gi|9256941|pdb|1E1Q|D Chain D, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256942|pdb|1E1Q|E Chain E, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256943|pdb|1E1Q|F Chain F, Bovine Mitochondrial F1-Atpase At 100k
 gi|9256948|pdb|1E1R|D Chain D, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256949|pdb|1E1R|E Chain E, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|9256950|pdb|1E1R|F Chain F, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And
           Aluminium Fluoride
 gi|11514060|pdb|1E79|E Chain E, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|11514061|pdb|1E79|F Chain F, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
 gi|14278507|pdb|1H8H|D Chain D, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278508|pdb|1H8H|E Chain E, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|14278509|pdb|1H8H|F Chain F, Bovine Mitochondrial F1-Atpase Crystallised In The
           Presence Of 5mm Amppnp
 gi|15825705|pdb|1H8E|D Chain D, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825706|pdb|1H8E|E Chain E, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|15825707|pdb|1H8E|F Chain F, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic
           Sites Occupied)
 gi|33357744|pdb|1OHH|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|33357745|pdb|1OHH|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|33357746|pdb|1OHH|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The
           Inhibitor Protein If1
 gi|51247972|pdb|1W0J|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247973|pdb|1W0J|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247974|pdb|1W0J|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247979|pdb|1W0K|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247980|pdb|1W0K|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|51247981|pdb|1W0K|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase
 gi|109157333|pdb|2CK3|D Chain D, Azide Inhibited Bovine F1-Atpase
 gi|109157334|pdb|2CK3|E Chain E, Azide Inhibited Bovine F1-Atpase
 gi|109157335|pdb|2CK3|F Chain F, Azide Inhibited Bovine F1-Atpase
 gi|145579794|pdb|2JDI|D Chain D, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579795|pdb|2JDI|E Chain E, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|145579796|pdb|2JDI|F Chain F, Ground State Structure Of F1-Atpase From Bovine Heart
           Mitochondria (Bovine F1-Atpase Crystallised In The
           Absence Of Azide)
 gi|158428985|pdb|2JIZ|D Chain D, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428986|pdb|2JIZ|E Chain E, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428987|pdb|2JIZ|F Chain F, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428992|pdb|2JIZ|K Chain K, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428993|pdb|2JIZ|L Chain L, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158428994|pdb|2JIZ|M Chain M, The Structure Of F1-Atpase Inhibited By Resveratrol.
 gi|158429002|pdb|2JJ1|D Chain D, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429003|pdb|2JJ1|E Chain E, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429004|pdb|2JJ1|F Chain F, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429009|pdb|2JJ1|K Chain K, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429010|pdb|2JJ1|L Chain L, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429011|pdb|2JJ1|M Chain M, The Structure Of F1-Atpase Inhibited By Piceatannol.
 gi|158429016|pdb|2JJ2|D Chain D, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429017|pdb|2JJ2|E Chain E, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429018|pdb|2JJ2|F Chain F, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429023|pdb|2JJ2|K Chain K, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429024|pdb|2JJ2|L Chain L, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158429025|pdb|2JJ2|M Chain M, The Structure Of F1-Atpase Inhibited By Quercetin.
 gi|158431069|pdb|2V7Q|D Chain D, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431070|pdb|2V7Q|E Chain E, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|158431071|pdb|2V7Q|F Chain F, The Structure Of F1-Atpase Inhibited By I1-60his, A
           Monomeric Form Of The Inhibitor Protein, If1.
 gi|268612201|pdb|2WSS|D Chain D, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612202|pdb|2WSS|E Chain E, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612203|pdb|2WSS|F Chain F, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612210|pdb|2WSS|M Chain M, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612211|pdb|2WSS|N Chain N, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
 gi|268612212|pdb|2WSS|O Chain O, The Structure Of The Membrane Extrinsic Region Of Bovine
           Atp Synthase
          Length = 482

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 192/431 (44%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 12  ATTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 71

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 72  GLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFVEM 130

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 131 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 190

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 191 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 250

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 251 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 309 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 368

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 369 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 424

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 425 AEVFTGHLGKL 435


>gi|124361780|gb|ABN09332.1| ATP synthase beta subunit [Lissocarpa guianensis]
          Length = 450

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|4206580|gb|AAD11721.1| ATP synthase beta subunit [Diplolaena dampieri]
          Length = 480

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+++ I      V      +       VV   K+ D  GQ I +  ++        V   
Sbjct: 10  GHVAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTAGQPINVACEVQQLLGNNRVRAV 66

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 67  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSA 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 126 PAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 185

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 186 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 245

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 246 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 304 STKGGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 364 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQ 422

Query: 420 S 420
            
Sbjct: 423 P 423


>gi|6017792|gb|AAF01630.1| ATP synthase beta subunit [Haloragis erecta]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D  GQ I +  ++        V   
Sbjct: 12  GRITQIIGPVLDVAFPPGXMPNIYXALVV---KGRDTAGQQINVTCEVQQLLGNNRVRAI 68

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    
Sbjct: 69  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVDTRTIS-PIHRSA 127

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 128 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 187

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 188 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 247

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 248 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 305

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 306 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 366 LQPRIVGEEHYEIAXRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 424

Query: 420 S 420
            
Sbjct: 425 P 425


>gi|302536954|ref|ZP_07289296.1| ATP synthase F1, alpha subunit [Streptomyces sp. C]
 gi|302445849|gb|EFL17665.1| ATP synthase F1, alpha subunit [Streptomyces sp. C]
          Length = 531

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 89/435 (20%), Positives = 164/435 (37%), Gaps = 24/435 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALETFVQSYQPDAASREEVGTVSVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D   P+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPGVMVRKSVHEPMQTGYKAVDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYAGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQYRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ     
Sbjct: 425 GKRMVELLKQGQYQP 439


>gi|224830498|gb|ACN66344.1| ATP synthase beta chain [Chasmanthera dependens]
          Length = 483

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK  L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKXVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|124361672|gb|ABN09278.1| ATP synthase beta subunit [Diospyros glandulosa]
 gi|124361682|gb|ABN09283.1| ATP synthase beta subunit [Diospyros kaki]
          Length = 465

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYSALVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRITSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|124361750|gb|ABN09317.1| ATP synthase beta subunit [Diospyros venosa]
          Length = 444

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 19  KGRDTVGQPISVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 78

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 79  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 137

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 138 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 198 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 257

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 258 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 315

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 316 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 375

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 376 ILGLDELSEED-RLTVARARKIERFLSQP 403


>gi|94501602|ref|ZP_01308119.1| ATP synthase F1, beta subunit [Oceanobacter sp. RED65]
 gi|94426285|gb|EAT11276.1| ATP synthase F1, beta subunit [Oceanobacter sp. RED65]
          Length = 458

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +G     L    ++   +V    +G  E
Sbjct: 1   MSSGKIVQIIGAVIDVEFPRDSVPKVYDALKVEG-GKITLEVQQQLGDGMVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G +  +     ++       GR+++ LG PID    +G+ +    I  K P    +
Sbjct: 60  GLKRGLVAENTNQPIQVPVGKETLGRIMDVLGDPIDEKGPIGEQE-RASIHRKAPSYDEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++  +TG++VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AGGQELLETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 179 GERTREGNDFYHEMSESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A +G YP +DPL S SR  D      +   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ RF+E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 RGVQTVLQRFKELKDIIAILGMDELSEED-KLTVARARKIERFLSQP 402


>gi|75326846|sp|Q7HHY4|ATPB_SALZA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582356|gb|AAF64293.1| ATP synthase beta subunit [Metroxylon vitiense]
 gi|13236730|gb|AAK14670.1| ATP synthase beta subunit [Salacca zalacca]
 gi|13236732|gb|AAK14671.1| ATP synthase beta subunit [Mauritia flexuosa]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVEG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|89363533|emb|CAJ82100.1| ATP synthase beta chain [Bergenia crassifolia]
          Length = 468

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +  P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNXPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|330928210|ref|XP_003302169.1| hypothetical protein PTT_13892 [Pyrenophora teres f. teres 0-1]
 gi|311322642|gb|EFQ89755.1| hypothetical protein PTT_13892 [Pyrenophora teres f. teres 0-1]
          Length = 517

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/441 (26%), Positives = 185/441 (41%), Gaps = 21/441 (4%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQVIRINLD 68
           L+  ++     + G I ++      V   +      L       G     L     +  +
Sbjct: 35  LSTRFASTDASKDGKIHAVIGAIVDVKFDTDQLPAILNAITTQNGDQKLILEVAQHLGEN 94

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
           IV    +   E +  G      G   +I       GR++N  G+PID    + K      
Sbjct: 95  IVRCIAMDGTEGLVRGSKASDTGAPIKIPVGHGTLGRIMNVTGEPIDERGPI-KATKYAP 153

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  P    +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 154 IHADPPEFTEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAK 213

Query: 188 DKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTA 238
                S+   VGER RE  +   +         D   K  +V    +E P  R    LT 
Sbjct: 214 AHGGFSVFTGVGERTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTG 273

Query: 239 VTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI
Sbjct: 274 LTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAIDMGIMQERI 333

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S 
Sbjct: 334 --TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSK 391

Query: 358 SRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+ D      D     + +  ++  ++  +DI  I G     +      V +   I  F
Sbjct: 392 SRMLDPRVIGEDHYNTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRF 450

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L Q     +   VF  I  KL
Sbjct: 451 LSQP---FAVAQVFTGIEGKL 468


>gi|257095876|ref|YP_003169517.1| ATP synthase F1 subunit beta [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048400|gb|ACV37588.1| ATP synthase F1, beta subunit [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 466

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/373 (28%), Positives = 173/373 (46%), Gaps = 13/373 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + +  G  V + G    +       GR++N LG+PID    +   +
Sbjct: 53  LGDGIVRTIAMGSSDGLRRGMKVNNTGAGISVPVGNATIGRIMNVLGRPIDEAGPIATEE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              EI    P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 113 -RREIHQLAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 172 NIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVLDKVAMVFGQMNEPPGNRLRVALTGL 231

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F   G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 232 TMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 289

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 290 TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSTSR 349

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     +E   +  ++   + +++E RDI  I G           AV++   I  FL 
Sbjct: 350 QLDPQVVGEEHYGVARAVQMTLQKYKELRDIIAILGMDELS-PEDKLAVYRARKIQRFLS 408

Query: 419 QSPSDLSSEDVFQ 431
           Q     S  +VF 
Sbjct: 409 QP---FSVAEVFT 418


>gi|21684923|emb|CAD11588.1| ATP synthase beta subunit [Xyris involucrata]
          Length = 482

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVXFPXGKMPNIYNALIVKG--RDTXGQXINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 62  MSATDGLXRGMEVIDTGAPLSVPVGXVTLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +   + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 TFIELETRLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYVEMKESGVINEKNLTESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGTEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|21633417|gb|AAM52183.1| ATP synthase beta subunit [Jacquemontia reclinata]
          Length = 486

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 17  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRTVAMSDT 76

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P    
Sbjct: 77  DGLMRGMDVIDMGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TKITSPIHRSAPAFTQ 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 136 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 195

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 196 VGERTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 255

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 256 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 314 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 373

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 VGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|17224786|gb|AAL37114.1| ATP synthase beta subunit [Croomia japonica]
          Length = 478

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRVAQIIGPVLDVFFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|78189967|ref|YP_380305.1| F0F1 ATP synthase subunit beta [Chlorobium chlorochromatii CaD3]
 gi|118573520|sp|Q3AP13|ATPB_CHLCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78172166|gb|ABB29262.1| ATP synthase F1 subcomplex beta subunit [Chlorobium chlorochromatii
           CaD3]
          Length = 462

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/428 (27%), Positives = 199/428 (46%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     +   + D +  + ++   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGRLPSILDALTVKREDGSKL--VLETQQHLGEERVRTVAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + G   ++   A   GR++N +G PIDG   +     +  I    P 
Sbjct: 59  ESTDGLVRGMGVVNTGAAIQVPVGAEVLGRMLNVVGDPIDGRGPVN-SKKTYSIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             +     + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +    +    +
Sbjct: 118 FEDISTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-G 249
            + VGER RE  +   + +    + K+ +V    +E P  R+   LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEEN 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L +RI     +KG++T+
Sbjct: 238 RDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQDRI--VSTKKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNVVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  L+ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYNTAQAVKQLLQRYKDLQDIIAILGMDELSDED-KLVVSRARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|1703668|sp|P50001|ATPA_STRLI RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|405799|emb|CAA80325.1| H(+)-transporting ATP synthase [Streptomyces lividans]
          Length = 529

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 174/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++ +  + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGCVVLGEFSGIEEGQPVSRTGEVLSVAVAEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 SGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +         +   + + +V A + +    +
Sbjct: 188 INQRDNWRTGDPNKQVRCIYVAIGQKGSTIASVRGALEENGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER       +G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDAEGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKSQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ+    +S+ED    +  
Sbjct: 425 GQRMVELLKQNQYQPMSTEDQVVSVWA 451


>gi|257852964|gb|ACV71493.1| ATP synthase beta subunit [Sauvagesia erecta]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G   D  GQ + +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVVKG--RDTAGQQLNVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110915586|gb|ABH02581.1| ATP synthase beta subunit [Avena sativa]
          Length = 474

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 36  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 95

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 96  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 154

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 155 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 214

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 215 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 274

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 275 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 332

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 333 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 392

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 393 D-RLTVARARKIERFLSQP 410


>gi|4206576|gb|AAD11719.1| ATP synthase beta subunit [Calodendrum capense]
          Length = 476

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|5758863|gb|AAD50837.1| ATP synthase beta subunit [Colchicum autumnale]
          Length = 496

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVVFSPGRMPNIYNALVVKGRDTVGQQNNVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNITDSKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|3850920|gb|AAC72152.1| ATP synthase beta subunit [Franklandia fucifolia]
          Length = 481

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V        +       GR
Sbjct: 33  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 93  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQXDTKLSIFETGIKVVDLLAPYRRGGKI 151

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 152 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 211

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 212 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 271

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 272 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 330 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 389

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 390 ILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|57868936|gb|AAW57464.1| ATP synthase beta subunit [Polemonium pauciflorum]
          Length = 494

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|50307119|ref|XP_453538.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1703697|sp|P49376|ATPB_KLULA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|1255776|gb|AAA96150.1| F1 ATPase beta subunit [Kluyveromyces lactis]
 gi|49642672|emb|CAH00634.1| KLLA0D10703p [Kluyveromyces lactis]
          Length = 505

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 190/432 (43%), Gaps = 21/432 (4%)

Query: 20  VVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
               G + ++      V     Q   + + +         + +V   +  + V    +  
Sbjct: 34  ASSQGKVRAVIGAIVDVQFEQGQLPAILNALEIDTPEGKLVLEVAQHLGENTVRTIAMDG 93

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G+ V   G    +       GR+IN +G+PID    +    +   I +  P  +
Sbjct: 94  TEGLVRGENVSDTGAPISVPVGRETLGRIINVIGEPIDERGPIN-SKMRKPIHADPPLFV 152

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
            +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+  
Sbjct: 153 EQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFT 212

Query: 195 -VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  
Sbjct: 213 GVGERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRD 272

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+
Sbjct: 273 EEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGS 330

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           +T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D A  
Sbjct: 331 VTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVV 390

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   + + +   +  ++  +DI  I G     +      V +   I  FL Q     +
Sbjct: 391 GQEHYDVATQVQQTLQAYKSLQDIIAILGMDELSEQD-KLTVERARKIQRFLSQP---FA 446

Query: 426 SEDVFQEITKKL 437
             +VF  I  +L
Sbjct: 447 VAEVFTGIPGRL 458


>gi|238921743|ref|YP_002935258.1| F0F1 ATP synthase subunit beta [Edwardsiella ictaluri 93-146]
 gi|269140874|ref|YP_003297575.1| F0F1-type ATP synthase, beta subunit [Edwardsiella tarda EIB202]
 gi|259585444|sp|C5BF40|ATPB_EDWI9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|238871312|gb|ACR71023.1| ATP synthase subunit beta [Edwardsiella ictaluri 93-146]
 gi|267986535|gb|ACY86364.1| F0F1-type ATP synthase, beta subunit [Edwardsiella tarda EIB202]
 gi|304560632|gb|ADM43296.1| ATP synthase beta chain [Edwardsiella tarda FL6-60]
          Length = 460

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 188/408 (46%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  +G  +  + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVKGGATKLVLEVQQQLGGGVVRCIAMGSS 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G D+        +       GR++N LG P+D    +G+ +    I    P   +
Sbjct: 61  DGLRRGLDVEDQNHPIEVPVGKATLGRIMNVLGDPVDMKGEIGEEE-RWAIHRAAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLSQP 404


>gi|257125432|ref|YP_003163546.1| F0F1 ATP synthase subunit beta [Leptotrichia buccalis C-1013-b]
 gi|257049371|gb|ACV38555.1| ATP synthase F1, beta subunit [Leptotrichia buccalis C-1013-b]
          Length = 465

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/381 (29%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRV 105
             V+  K    + +V   N + V     +   E +  G  V   G+  ++       GR+
Sbjct: 29  LEVYNEKGEKLVAEVHAHNGNNVVRAVAMSGTEGLRRGLEVVDTGKPIQVPVGRATLGRI 88

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+ +D  + L +  L   I    P    +    +  +TGI+V+D+  P   G +IG
Sbjct: 89  FNVLGEAVDEGEKLDEDVLRESIHKDAPSFEQQGTDSEILETGIKVVDLLAPYLKGGKIG 148

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           +F G+G+GK+ L+     +         + + VGER RE R+   +      + K+ +V 
Sbjct: 149 LFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMTESGVIDKTALVY 208

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LTA+T+AEYF  K   NVLL +D+I RF  +  E++   G +P A 
Sbjct: 209 GQMNEPPGARLRVGLTALTMAEYFRDKEGQNVLLFIDNIFRFTQAGSEVSALLGRMPSAV 268

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +E+  L ERI  +    G+IT+V +V V  D+  DP   +  + LD   VL+R
Sbjct: 269 GYQPNLATEMGALQERI--TSTNTGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR 326

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR+ +      +  K+      ++ R++E +DI  I G    +
Sbjct: 327 QIASLGIYPAVDPLDSTSRILEPEIVGNEHYKIARETQKVLQRYKELQDIIAILGMDE-L 385

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V++   I  F  Q 
Sbjct: 386 DENDKLTVNRARKIQRFFSQP 406


>gi|157285249|gb|ABV31364.1| ATPase [Vibrio orientalis]
          Length = 441

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 172/420 (40%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +      +  +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQRNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSQEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|14718187|gb|AAK72832.1| ATP synthase beta subunit [Pontederia cordata]
          Length = 480

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRVAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGXLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|66276277|gb|AAY44153.1| ATP synthase beta subunit [Gurania tubulosa]
          Length = 480

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/423 (26%), Positives = 183/423 (43%), Gaps = 29/423 (6%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
           V  G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V 
Sbjct: 1   VHLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTAGQEINVTCEVQQLLGNNRVR 58

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V        +       GR+ N LG+PID    +     +  I  
Sbjct: 59  AVAMSATDGLMRGMEVVDTRAPLSVPVGGTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHR 117

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 118 SAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 177

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 178 GVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTAL 237

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 238 TMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 297 -TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 355

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 356 TMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFL 414

Query: 418 KQS 420
            Q 
Sbjct: 415 SQP 417


>gi|332637150|ref|ZP_08416013.1| F0F1 ATP synthase subunit beta [Weissella cibaria KACC 11862]
          Length = 466

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/424 (27%), Positives = 194/424 (45%), Gaps = 17/424 (4%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGD-FVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +  G +  +      V   S  Q   + +  ++ +G+      +V + +   +V    + 
Sbjct: 1   MNTGRVVQVIGPVVDVAFPSGTQVPDINNALIIDKGEQGSLTVEVSLALGDGVVRTIAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V        +       GRV N LG P+DG ++LG+      I    P  
Sbjct: 61  STDGLQRGMAVEDTNAPISVPVGEATLGRVFNVLGNPVDGGEALGEDVPRDPIHRDAPAY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+ 
Sbjct: 121 DQLATSTEILETGIKVIDLLAPYIRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + K + +V    +E P  R    LT +TIAE+F      
Sbjct: 181 TGVGERTREGNDMYHEMKDSGVLKQTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVNGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTQKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            +V V  D++ DP   +  + LD    L RSL ++G YP VDPLAS S  L  +    + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLASTSTALTPEIVGQEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++ + +   + R+ E +DI  I G     D      V++   I  FL Q     S  + 
Sbjct: 359 YEVATEVQRTLQRYRELQDIISILGMDELSDEE-KTIVNRARRIQFFLSQP---FSVAET 414

Query: 430 FQEI 433
           F  +
Sbjct: 415 FTGL 418


>gi|323715490|gb|ADY04813.1| ATP synthase beta subunit [Pileostegia viburnoides]
          Length = 483

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTGGQPINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 68  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPHRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPALVTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|307133303|ref|YP_003885319.1| F1 sector of membrane-bound ATP synthase, subunit beta [Dickeya
           dadantii 3937]
 gi|306530832|gb|ADN00763.1| F1 sector of membrane-bound ATP synthase, beta subunit [Dickeya
           dadantii 3937]
          Length = 460

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/408 (26%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPNVYDALEVENGAERLVLEVQQQLGGGLVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V +      +       GR++N LG+P+D    +G+ +    I    P    
Sbjct: 61  DGLRRGLKVANLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|228016461|gb|ACP51293.1| ATP synthase CF1 beta subunit [Pinus torreyana subsp. insularis]
          Length = 492

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 192/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S  +    G I+ I      V+     +  + + +  +G+ +   
Sbjct: 1   MRKNPLVLG-----VSARVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|171060196|ref|YP_001792545.1| F0F1 ATP synthase subunit beta [Leptothrix cholodnii SP-6]
 gi|170777641|gb|ACB35780.1| ATP synthase F1, beta subunit [Leptothrix cholodnii SP-6]
          Length = 474

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 184/413 (44%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
             G  +  I +V       +Q   + D +  +G       Q  ++   +V    +G  + 
Sbjct: 10  AVGKIVQCIGAVVDVEFPRNQMPRIYDALKLEGTALTLEVQ-QQLGDGVVRTIALGSSDG 68

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+++ LG PID    +   +LS  I  K P      
Sbjct: 69  LRRGLEVKNTGLPITVPVGPATLGRIMDVLGNPIDERGPVSM-ELSASIHRKAPAYDELS 127

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             +   +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 128 PSQDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 187

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +TIAE F  +
Sbjct: 188 ERTREGNDFYHEMADSGVVNLESLGESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDE 247

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 248 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSIT 305

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 306 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSNSRQVDPNVVGE 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      ++  ++ R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 366 EHYNTTRAVQQVLQRYKELRDIIAILGMDE-LAPEDKLAVSRARKIQRFLSQP 417


>gi|157285077|gb|ABV31278.1| ATPase [Vibrio chagasii]
 gi|157285079|gb|ABV31279.1| ATPase [Vibrio chagasii]
 gi|157285127|gb|ABV31303.1| ATPase [Vibrio chagasii]
          Length = 441

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEHYVETFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|14718062|gb|AAK72772.1| ATP synthase beta subunit [Gladiolus buckerveldii]
          Length = 479

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|21633445|gb|AAM52197.1| ATP synthase beta subunit [Porana commixta]
          Length = 486

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V      +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 17  GRIVQIIGPVLDVAFPPGKMPYIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 76

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V   G    +       GR+ N LGKP+D    +   + +  I    P  + 
Sbjct: 77  NGLMRGLEVIDTGAPISVPVGGSTLGRIFNVLGKPVDNLGPVD-TNTTSPIHRSAPAFIQ 135

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 136 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 195

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 196 VGERTREGNDLYMEMKESGVINEETIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 255

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 256 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 313

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 314 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 373

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|312285241|gb|ADQ64362.1| ATP synthase beta subunit [Menispermum dauricum]
          Length = 469

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 182/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+ N LG+P+D    +     S  I    P  +   
Sbjct: 63  LMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSSTTS-PIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|297837989|ref|XP_002886876.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Arabidopsis lyrata subsp. lyrata]
 gi|297332717|gb|EFH63135.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI--------CP 74
           G I+ I      V     +   + + +V +G   D LGQ I +  ++  +          
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQEINVTCEVQQLLGNNRVRDVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|110915656|gb|ABH02616.1| ATP synthase beta subunit [Holcus annuus]
 gi|110915678|gb|ABH02627.1| ATP synthase beta subunit [Phleum pratense]
          Length = 476

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 38  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 97

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 98  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 156

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 157 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 216

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 217 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 276

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 277 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 334

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 335 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 394

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 395 D-RLTVARARKIERFLSQP 412


>gi|114509210|gb|ABI75173.1| ATPase alpha subunit [Limnobium laevigatum]
          Length = 361

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V          G  + +  D V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEFACG---VKGIALNLENDNVGIVIFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS----------DCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +      +          +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKEKENEKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|37720989|gb|AAN32497.1| ATP synthase beta subunit [Cypripedium passerinum]
          Length = 497

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVIFPPGKMPNIYNALVIKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  ++    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIGESKVALIYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21684915|emb|CAD11584.1| ATP synthase beta subunit [Restio paludosus]
          Length = 491

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKLPNIYNALVIQG--RDIVGQQINVTCEVQQLLGNNRVKTVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATEGLMRGMEVIDTGAPLSVPVGKATLGRIFNVLGEPVDNLGPVDTS-ATSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +K +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKKASITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPQIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 428


>gi|84683667|ref|ZP_01011570.1| ATP synthase subunit B [Maritimibacter alkaliphilus HTCC2654]
 gi|84668410|gb|EAQ14877.1| ATP synthase subunit B [Rhodobacterales bacterium HTCC2654]
          Length = 474

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 183/417 (43%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +      +  + +V   +  + V    +   E + 
Sbjct: 6   GKVTQVIGAVVDVQFEDHLPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   +       GR++N  G P+D    + + D    I +  P    +   
Sbjct: 66  RGHEVADTGKPISVPVGTATLGRILNVTGDPVDEKGPI-EADEYRPIHADAPDFDEQATE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 AEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGLSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    LT +T+AE F     
Sbjct: 185 TREGNDLYHEMIESGVLTPDNLPDSKIALVYGQMNEPPGARARIALTGLTLAEQFRDATG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D     D 
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPLVIGDE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYKVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|330937325|gb|EGH41327.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 430

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/363 (28%), Positives = 172/363 (47%), Gaps = 12/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  E +  G  V   G    +       GR+++ LG PID    +   +
Sbjct: 17  LGDGVVRTIAMGSTEGLKRGLEVTDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIATEE 76

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    +       +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 77  -RWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIR 135

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 136 NIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGL 195

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G++VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 196 TMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI-- 253

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 254 TSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 313

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFL 417
             D      +       + +++ R++E +DI  I G         DK  V++   I  FL
Sbjct: 314 QLDPNVIGQEHYDTARGVQYVLQRYKELKDIIAILGMDELS--ETDKQLVNRARKIQRFL 371

Query: 418 KQS 420
            Q 
Sbjct: 372 SQP 374


>gi|271502665|ref|YP_003335691.1| ATP synthase F1 subunit beta [Dickeya dadantii Ech586]
 gi|270346220|gb|ACZ78985.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech586]
          Length = 460

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/408 (25%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + + +  +      + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPNVYEALEVENGAEKLVLEVQQQLGGGLVRCIAMGSS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+P+D    +G+ +    I    P   +
Sbjct: 61  DGLRRGLKVTSLAHPIEVPVGKATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 404


>gi|14718097|gb|AAK72788.1| ATP synthase beta subunit [Knema latericia]
          Length = 490

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|61968247|gb|AAX57050.1| ATP synthase beta subunit [Heywoodia lucens]
          Length = 479

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|7688421|emb|CAB89737.1| ATP synthase beta subunit [Viscainoa geniculata]
          Length = 487

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRI-NLDIVYICPVG 76
           G I+ I      V      +  + + ++ + +N+     +   +V ++   + V    + 
Sbjct: 20  GRIAQIIGPVLEVAFPPGNMPNIYNALIVKARNTFGXPINVTCEVQQLLGXNRVRAVAMS 79

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 80  ATDGLMRGMEVIDTGAPXSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAPAF 138

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 139 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 198

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 199 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQXNEPPGARMRVGLTALTMAEY 258

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 259 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 316

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 317 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 376

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 377 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|21633347|gb|AAM52148.1| ATP synthase beta subunit [Tetralocularia pennellii]
          Length = 485

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 16  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 75

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 76  NGLMRGMGVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHRSAPAFIQ 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 135 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 194

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 195 VGERTREGNDLYLEMKESRVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 254

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 255 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 312

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 313 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 372

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|28630334|gb|AAM93479.1| H+-transporting ATP synthase alpha subunit isoform 1 [Scyliorhinus
           canicula]
          Length = 364

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 164/365 (44%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR- 94
           V  L + V   + V     +S   G  + +  D V +   G  + I  GD+V   G    
Sbjct: 1   VYGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDVVKRTGAIVD 56

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +       GRV++ALG  IDG   LG   +   +  K P  + R  V +  +TGI+ +D 
Sbjct: 57  VPVGEELLGRVVDALGNAIDGKGPLG-AKIRRRVGLKAPGIIPRISVREPMQTGIKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVIISLVGERGREVRE 204
             P+  GQR  +      GK      T+++    +D  D       I   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTGIAIDTIINQKRFNDGTDEKKKLYRIYVAIGQKRSTVAQ 175

Query: 205 FIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G + L+I D +++ A
Sbjct: 176 LVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    YP+ VF    RLLER          G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAYPSDVFYLHSRLLERAAKMNDNFGGGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L  +G  P ++   SVSR+   A +   K++  ++   + 
Sbjct: 296 AYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGTMKLELA 355

Query: 382 RFEET 386
           +F E 
Sbjct: 356 QFREV 360


>gi|326386949|ref|ZP_08208563.1| FliI/YscN family ATPase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208629|gb|EGD59432.1| FliI/YscN family ATPase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 442

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 147/440 (33%), Positives = 224/440 (50%), Gaps = 6/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +      L ++A  +      + G +S+       V+ LS  + +G              
Sbjct: 2   LNPAFPLLDRMASTHPDLSPRRYGVVSACDGGLLEVSGLS--LPIGAQCRIAHGRGTLSA 59

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           + I        +  +G    +  G  V   GR   +     + GR ++  G+PIDG   +
Sbjct: 60  EAIGFRNGRTLMMLLGDPVLLRPGARVRPEGRPGMLPVGEAFLGRAVDGEGQPIDGGPPI 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G            A++R  V   F  G+R ++  T    GQRIG+ AGSG+GKS LL 
Sbjct: 120 MSG-REWPSGGIRAGALDRSPVRATFDVGVRALNALTTFGVGQRIGIMAGSGVGKSVLLD 178

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M A     + VI+ L+GER REV +F+     G   ++S+VV   +D +P LR    + A
Sbjct: 179 MIAHGAEAEIVIVGLIGERAREVSDFVERHMQGPKRERSIVVAVPADHAPNLRIRGAMLA 238

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            ++AEYF   G  VLLI+DS+TR AH+ REIA   GE   ARGYP S  + + +L+ER G
Sbjct: 239 TSMAEYFRKAGRRVLLIMDSLTRVAHAGREIALLLGEPGAARGYPPSALATITKLVERAG 298

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S +  G++T + +VL DGDN +DP+ D+ RSILDGH+VL+R LA+ G+YP +D  AS+S
Sbjct: 299 NSAESGGSVTGLYTVLADGDNQDDPVVDTARSILDGHVVLSRDLAQRGQYPAIDIAASLS 358

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ +   + D  ++      LI  +E  RD+ L+G YR G D  LD+A+     +  FL 
Sbjct: 359 RVMNDIVAPDHARIARKFRALIATYEANRDLVLMGAYRQGADPQLDRAIAMHDRLTAFLA 418

Query: 419 QSPSD-LSSEDVFQEITKKL 437
           QS  + +   D   ++   +
Sbjct: 419 QSQKEIVPLADSIAQLVALI 438


>gi|325854950|ref|ZP_08171666.1| ATP synthase F1, alpha subunit [Prevotella denticola CRIS 18C-A]
 gi|327313283|ref|YP_004328720.1| ATP synthase F1 subunit alpha [Prevotella denticola F0289]
 gi|325483928|gb|EGC86868.1| ATP synthase F1, alpha subunit [Prevotella denticola CRIS 18C-A]
 gi|326945293|gb|AEA21178.1| ATP synthase F1, alpha subunit [Prevotella denticola F0289]
          Length = 527

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/430 (21%), Positives = 164/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      V  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTVGDGVARVYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCILLGPTAGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG  IDG   L   D   M +  K P  + RQ
Sbjct: 85  KEGQSVRRTHRIASIRVNDSFLGRVVNPLGVAIDGKGDLDLTDAFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TG++ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDAIINQKSFYEQGQPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   +++         +++V AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVAALVQNLKDHGALPYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGYS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      +        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINDQQEIAEKMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPECMKGHVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESDLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQVKSMKKVAGTLKIDMAQYRELE---AFSKFSSDMDKVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L Q  
Sbjct: 442 KNNQLLIQPQ 451


>gi|254496584|ref|ZP_05109452.1| flagellum-specific ATP synthase FliI [Legionella drancourtii
           LLAP12]
 gi|254354208|gb|EET12875.1| flagellum-specific ATP synthase FliI [Legionella drancourtii
           LLAP12]
          Length = 446

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 150/435 (34%), Positives = 240/435 (55%), Gaps = 5/435 (1%)

Query: 5   LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
           ++ ++++  +    L +  G +S    +       +Q V    F ++  ++     +V+ 
Sbjct: 9   IKIMSEMRVEEHSGL-LHCGRVSRAVGLTLEAQGFNQAVGAHCF-INVNESHSIEAEVVG 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD 123
              + VY+  +G  + ++ G ++   GR  ++       GR++N  G  ID    +   +
Sbjct: 67  FGNERVYLMSIGNIQGLAPGMIITPTGRVAQVEIGWSLLGRIVNGSGTLIDDGPPIELSE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  +       + R  ++     GIR I+    +  GQRIG+FAGSG+GKS LL M  R
Sbjct: 127 -TYPLECAAINPLKRAAIDTYLDVGIRAINGLITIGRGQRIGLFAGSGVGKSVLLGMMTR 185

Query: 184 SDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
               D V++ L+GERGREV+EFI      + LK++VVV A +DESP+ R      A +IA
Sbjct: 186 FTKADVVVVGLIGERGREVKEFIECSLGEEGLKRAVVVAAPADESPLRRLHGAKVATSIA 245

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF  +G +VLL++DS+TRFA + REIA + GE P  +GYP SVF++LP+L+ER G    
Sbjct: 246 EYFRDQGKHVLLLMDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAGNGAL 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAEEG+YP +D  AS+SR+  
Sbjct: 306 GSGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLAEEGQYPAIDLEASISRVMQ 365

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                 +   +      +  +E+ +D  L+G Y  G D  LDKA+     I  +++Q  +
Sbjct: 366 TVVPEQQMNDMLLFKKYLSLYEKNKDFILLGAYVKGSDPNLDKAILARDKIRKYMEQGMN 425

Query: 423 DLSSEDVFQEITKKL 437
           +  + +    +  +L
Sbjct: 426 EQFNYNDSVSLLSQL 440


>gi|11467760|ref|NP_050811.1| ATP synthase CF1 beta subunit [Nephroselmis olivacea]
 gi|17432924|sp|Q9TL34|ATPB_NEPOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|5880689|gb|AAD54782.1|AF137379_5 CF1 beta subunit of ATP synthase [Nephroselmis olivacea]
          Length = 491

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 189/420 (45%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLD-IVYICP 74
           Q G I  I      V      +  + + ++ +G+N        + +V ++  D +V    
Sbjct: 10  QAGKIVQIVGPVMDVAFQPGSMPNIYNALIVKGRNGAGQEVSVVCEVQQLLGDGLVRAVS 69

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   GR   +       GR+ N LG+P+D    +G  + ++ I  + P
Sbjct: 70  MSATDGLMRGMEVTDTGRALSVPVGPTTLGRIFNVLGEPVDNMGPVG-NEKTLPIHREAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMCESKVINKADVKSSKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 307 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPWILGDDHYGTAQRVKQTLQRYKELQDIIAILGLDELSEED-RMIVARARKIERFLSQP 425


>gi|254569858|ref|XP_002492039.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia pastoris GS115]
 gi|238031836|emb|CAY69759.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase
           [Pichia pastoris GS115]
 gi|328351470|emb|CCA37869.1| F-type H+-transporting ATPase subunit beta [Pichia pastoris CBS
           7435]
          Length = 503

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/448 (25%), Positives = 189/448 (42%), Gaps = 21/448 (4%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQ 61
                 Q             G + ++      V      +   L    +  G     L  
Sbjct: 16  QTARANQRLARGLATAAASTGKVRAVIGAVVDVQFEQGQLPDILNALELQNGDQKLVLEV 75

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
              +  + V    +   E +  G  V   G    +       GR+IN +G+PID    + 
Sbjct: 76  AQHLGENTVRTIAMDGTEGLVRGTSVTDTGSPISVPVGRGTLGRIINVIGEPIDERGPI- 134

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I +  P  +N+    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +  
Sbjct: 135 ECKQRNPIHADPPSFVNQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQE 194

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILR 231
              +        S+   VGER RE  +   +         +   K  +V    +E P  R
Sbjct: 195 LINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGAR 254

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++
Sbjct: 255 ARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 314

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  +KG++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP 
Sbjct: 315 GLLQERI--TTTQKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPA 372

Query: 351 VDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SRL D      +  ++ + +   +  ++  +DI  I G     +      V +
Sbjct: 373 VDPLDSKSRLLDVAVVGQEHYEVATQVQQTLQAYKSLQDIIAILGMDELSEQD-KLTVER 431

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              I  FL Q     +  +VF  I  +L
Sbjct: 432 ARKIQRFLSQP---FAVAEVFTGIPGRL 456


>gi|110915594|gb|ABH02585.1| ATP synthase beta subunit [Bellardiochloa variegata]
          Length = 475

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 37  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 96

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 97  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 155

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 156 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 215

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 216 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 275

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 276 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 333

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 334 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 393

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 394 D-RLTVARARKIERFLSQP 411


>gi|37545702|gb|AAM97783.1| ATP synthase beta subunit [Corynotheca micrantha]
          Length = 469

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75326849|sp|Q7HHY7|ATPB_LICGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236710|gb|AAK14660.1| ATP synthase beta subunit [Licuala grandis]
 gi|13236714|gb|AAK14662.1| ATP synthase beta subunit [Pritchardiopsis jeanneneyi]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  S LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|13236782|gb|AAK14696.1| ATP synthase beta subunit [Hydriastele pinangoides]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDAVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4206582|gb|AAD11722.1| ATP synthase beta subunit [Casimiroa edulis]
          Length = 474

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 65  MSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTMS-PIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTSLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALAMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|241912886|gb|ACS72121.1| AtpB [Porphyrostachys pilifera]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|237688540|ref|YP_002905158.1| ATP synthase CF1 beta subunit [Pinus contorta]
 gi|226875368|gb|ACO89106.1| ATP synthase CF1 beta subunit [Pinus contorta]
          Length = 492

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 192/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S  +    G I+ I      V+     +  + + +  +G+ +   
Sbjct: 1   MRKNPLVLG-----VSARVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|212703958|ref|ZP_03312086.1| hypothetical protein DESPIG_02011 [Desulfovibrio piger ATCC 29098]
 gi|212672661|gb|EEB33144.1| hypothetical protein DESPIG_02011 [Desulfovibrio piger ATCC 29098]
          Length = 473

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/410 (27%), Positives = 187/410 (45%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSD---NLGQV-IRINLDIVYICPVGI 77
           G I  +      V     ++   L    +    NSD    + +V   +  ++V    +  
Sbjct: 6   GKIVQVIGAVVDVEFSDGHLPDILTALEIKNPNNSDAPELVCEVAQHLGDNVVRTIAMDA 65

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GR++N +G+P+D    +   +    I    P   
Sbjct: 66  TEGLVRGMEVVDTGNPIMVPVGKAAVGRILNVIGRPVDEMGPVN-AEKYYPIHRPAPEFT 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         + +
Sbjct: 125 EQNTKVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFA 184

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +     + +++ +V    +E P  R    LTA+  AEYF  +   +
Sbjct: 185 GVGERTREGNDLYNELKEAGVLERATLVYGQMNEPPGARARVALTALACAEYFRDEENQD 244

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V 
Sbjct: 245 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTNKGSITSVQ 302

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D      +  
Sbjct: 303 AVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHY 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 363 SVARQVQMVLQKYKELQDIIAILGMDELSDED-KLTVARARRIQRFLSQP 411


>gi|110915636|gb|ABH02606.1| ATP synthase beta subunit [Festuca rubra]
          Length = 471

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 42  LGNNXVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS- 100

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 101 ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 160

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 161 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARM 220

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 221 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 280

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 281 SLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAV 338

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 339 DPLDSTSTMLQPRIVGNEHYETAQRVKXTLQRYKELQDIIAILGLDELSEED-RLTVARA 397

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 398 RKIERFLSQP 407


>gi|42559048|gb|AAS20210.1| ATP synthase beta subunit [Medeola virginiana]
          Length = 477

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V   S+   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPSKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|24940266|emb|CAD43399.1| ATP synthase beta subunit [Tiquilia plicata]
          Length = 480

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 178/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D  GQ I +  ++        V   
Sbjct: 10  GRIVQIIGPVLDVAFPPXKMPNIYNALVV---KGRDTAGQPINVTCEVQQLLGNNRVRAV 66

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 67  AMSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTS-PIHRSA 125

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 126 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 185

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 186 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 245

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 246 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 303

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 304 STKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 363

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 364 LQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 422

Query: 420 S 420
            
Sbjct: 423 P 423


>gi|320160783|ref|YP_004174007.1| ATP synthase subunit beta [Anaerolinea thermophila UNI-1]
 gi|319994636|dbj|BAJ63407.1| ATP synthase subunit beta [Anaerolinea thermophila UNI-1]
          Length = 466

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 13/410 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
             G +  I      V   +  +        V        + +V + +    V    +   
Sbjct: 5   ATGRVVQIQGSVVDVEFPADDLPTIYEALEVLPPSGEPLVLEVQKYLGDSWVRTVAMDTT 64

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N +GKPIDG  S+ + D+   I    P   +
Sbjct: 65  DGLQRGIPVRRTGAPITVPVGPSTLGRIFNVIGKPIDGKGSV-ESDIYYPIHRPAPRFED 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISL 194
           +    + F+TG++VID+  P   G + G+F G+G GK+ ++    RS         + + 
Sbjct: 124 QSTRVEVFETGLKVIDLIAPFTKGGKTGIFGGAGTGKTVIIMELIRSIATVHKGNSVFAG 183

Query: 195 VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +   + L   + K +V+V    +E   +R    LTA+ +AEYF  +G +VL
Sbjct: 184 VGERTREGTQLYREMLESGVMKDTVMVFGQMNEPSGVRLRVALTALAMAEYFRDQGRDVL 243

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  S  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V
Sbjct: 244 LFIDNIFRFTMSGSEVSALLGRMPSAVGYQPTLATEMGELQERI--TSTHQGSITSMQAV 301

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+++DP   +  + LD  I L+R++ E+G +P VDPL S SR+ D      +  + 
Sbjct: 302 YVPADDYSDPAPVATFAHLDATIALDRAIVEKGIFPAVDPLVSTSRILDPLIVGEEHYRT 361

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
              +  ++ R+++ +DI  I G+    +      V +   I  F  Q   
Sbjct: 362 AREVQRVLQRYKDLQDIIAILGFDELSEDD-KLIVSRARKIERFFSQPMF 410


>gi|319936635|ref|ZP_08011048.1| ATP synthase subunit beta [Coprobacillus sp. 29_1]
 gi|319808192|gb|EFW04757.1| ATP synthase subunit beta [Coprobacillus sp. 29_1]
          Length = 468

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/406 (27%), Positives = 187/406 (46%), Gaps = 11/406 (2%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G  + ++  V            L   +    +      +V   I  DIV    +G  + +
Sbjct: 5   GKIVRAVGPVVDIAFNADFLPALNTAIQIDNQGESLTVEVAQHIGDDIVRCIAMGPTDGL 64

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D +       +       GR+ N LG PIDG + L    ++M I    P    ++ 
Sbjct: 65  IRGLDAIDTGAPISVPVGNETLGRMFNVLGNPIDGKEPLDSSVMAMPIHRSAPTYAQQRT 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 125 ETEILETGIKVIDLICPYIKGGKIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGE 184

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R    LT +T+AEYF   +  +VLL 
Sbjct: 185 RSREGNDLYYEMKESGVLNKTTLVFGQMNEPPGSRLRVALTGLTMAEYFRDEQNQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P   GY  ++ +E+ +L ERI  +  +KG+IT+V +V V
Sbjct: 245 IDNIFRFTQAGSEVSALLGRVPSQAGYQPTLATEMGQLQERI--TSTKKGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVS 374
             D+  DP   +  + LD  +VL+RS+A  G YP VDPL S SR  D         ++  
Sbjct: 303 PADDLTDPAPATTFAHLDAKVVLDRSIAALGIYPAVDPLNSSSRALDPLVVGQVHYEVAH 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +F+E +DI  I G     +      V +   I ++L Q 
Sbjct: 363 GVQQILQKFQELQDIIAILGMDELSEED-KITVARARRIRNYLSQP 407


>gi|307244067|ref|ZP_07526186.1| ATP synthase F1, beta subunit [Peptostreptococcus stomatis DSM
           17678]
 gi|306492591|gb|EFM64625.1| ATP synthase F1, beta subunit [Peptostreptococcus stomatis DSM
           17678]
          Length = 466

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 180/408 (44%), Gaps = 15/408 (3%)

Query: 24  GYISSITSVYYTVTCLSQ---YVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           G I  I      +    +      L    +     +  + +V   I  D V    +   +
Sbjct: 5   GKIVQIVGAVLDIRFEDEKNLPNLLNALEIKLENGNKIVAEVAQHIGNDTVRCIAMSATD 64

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G      G    +       GRV N LG+ ID    + +G     I  + P     
Sbjct: 65  GLVRGMEAVDTGAPISVPVGKETLGRVFNVLGEAIDLK-PMPEGVSLSPIHKEAPAYDEL 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
           +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + S V
Sbjct: 124 ETKAEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGV 183

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   +      + K+ +V    +E P  R    LT +T+AE+F  +   +VL
Sbjct: 184 GERTREGNDLYGEMTESGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDQEGQDVL 243

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V
Sbjct: 244 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAV 301

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  S LD   VL+R ++  G YP VDPL S SR+ D      +  ++
Sbjct: 302 YVPADDLTDPAPATTFSHLDAKTVLSRQISSLGIYPAVDPLESTSRVLDPNIVGKEHYEV 361

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R+ E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 ARGVQSILQRYRELQDIIAILGMDELSDED-KVTVARARKIQRFLSQP 408


>gi|221078755|gb|ACL99452.1| ATP synthase beta subunit [Diospyros samoensis]
          Length = 465

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+TI
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTI 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|219552242|gb|ACL26836.1| ATP synthase beta chain [Phyllanthus debilis]
          Length = 423

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSAIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|110915626|gb|ABH02601.1| ATP synthase beta subunit [Dichelachne micrantha]
          Length = 490

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +      FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDEXSEED-RLTVARARKXERFLSQP 426


>gi|37720991|gb|AAN32498.1| ATP synthase beta subunit [Hemerocallis littorea]
          Length = 497

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|33327741|gb|AAQ09234.1| ATP synthase beta subunit [Berberis aquifolium]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      VT    +   + + +V +G+  D + Q I +  ++        V    
Sbjct: 13  GRIIQIIGPVLDVTFPPGKMPNIYNALVVKGQ--DTVAQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGVPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGDEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|13236716|gb|AAK14663.1| ATP synthase beta subunit [Washingtonia filifera]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISS-ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+  I  V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQNIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14587179|gb|AAK70490.1| ATP synthase beta subunit [Anigozanthos flavidus]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 434


>gi|62085210|gb|AAX63008.1| ATP synthase beta subunit [Celastrus orbiculatus]
          Length = 486

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINLICEVQQLLGNNQVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|225619607|ref|YP_002720864.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Brachyspira hyodysenteriae WA1]
 gi|225214426|gb|ACN83160.1| flagellar biosynthesis/type III secretory pathway ATPase
           [Brachyspira hyodysenteriae WA1]
          Length = 484

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 162/439 (36%), Positives = 248/439 (56%), Gaps = 13/439 (2%)

Query: 2   QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG 60
           +K  +   ++ +D +  L+   G +  +            +  LGD   ++   NS    
Sbjct: 14  KKTFDKYRKVVDDVA--LLKSYGKVKEVIGSLVISEG--PFCKLGDMCRIYMNDNSYLDA 69

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
           + I      V +   G    I+ G++V+ + R   +       G V++A GKP+ G    
Sbjct: 70  EAIGFRNQDVLLATYGPVNGITFGNMVYSFERPLSVMCCDEILGTVLDARGKPLAGGGH- 128

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              +  + +       MNR R+ K  +TG+R ID    +  GQR+ + +G+G+GKSTLLS
Sbjct: 129 NFYETPIPVSHSAVNPMNRPRINKHIQTGVRAIDGLLTVGQGQRMAIMSGTGVGKSTLLS 188

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           M AR+   D  +I+L+GER REVR+FI  D   + LK+S++VVATSD++P+LR  A  TA
Sbjct: 189 MIARNTNADVNVIALIGERRREVRDFIERDLGEEGLKRSILVVATSDDAPLLRVRAAYTA 248

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            TIAEYF  KG NV+ ++DS+TRFA + REI  + GE P  RGY  SVFSEL +LLER G
Sbjct: 249 TTIAEYFRDKGKNVMFMVDSVTRFALAQREIGLSRGEPPTTRGYTPSVFSELAKLLERTG 308

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            S K  G+ITA  +VLV+GD+ ++PI D+VR ILDGHIVL+R LA  G +P +D   S+S
Sbjct: 309 TSSK--GSITAFYNVLVEGDDLDEPITDAVRGILDGHIVLSRDLANRGHFPAIDVNKSIS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+ ++  S   K+       +   + E +++ +IGGY  G    +D+A+   P++  +L+
Sbjct: 367 RIMNEVVSNMHKRAAREFLKMSADYNEAKELIMIGGYAKGSMPEVDRAIDYKPMMDRYLQ 426

Query: 419 QSPSDLSSEDVFQEITKKL 437
           Q   ++SS   F +  + L
Sbjct: 427 QDVYEVSS---FADSKEAL 442


>gi|183206518|gb|ACC54457.1| ATP synthase beta subunit [Physoplexis comosa]
          Length = 472

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + J  G  V   G    +       GR
Sbjct: 29  KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGJMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAV 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|159900585|ref|YP_001546832.1| F0F1 ATP synthase subunit beta [Herpetosiphon aurantiacus ATCC
           23779]
 gi|226740209|sp|A9AVV4|ATPB_HERA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|159893624|gb|ABX06704.1| ATP synthase F1, beta subunit [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 471

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/417 (27%), Positives = 196/417 (47%), Gaps = 21/417 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNL-GQVIR-INLDIVYICPVG 76
           +  G I  IT V       +  +        +  G+   +L  +V + +   +V    + 
Sbjct: 1   MATGKILQITGVVIDAEFPADGLPQIYNALEIPLGEGRSSLICEVQQQLGDSVVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GRV +  G+PIDG+ ++G    +M I    P  
Sbjct: 61  TTDGLVRGMDVIDTGAPISVPVGPETLGRVFDVQGRPIDGEGAVGTTK-TMPIHRPAPTF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVII 192
             +    + F+TGI+VID+  P   G + GVF G+G+GK+ ++     +   +     + 
Sbjct: 120 EEQSNRAELFETGIKVIDLIAPFTKGGKTGVFGGAGVGKTVIIQELISNIAKEQSGYSVF 179

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  + I +               K+V+V    +E P  R    L+A+T+AEY
Sbjct: 180 AGVGERSREGNDLIHEMKDSKIPGTDQTVFDKTVMVFGQMNEPPGARLRVALSALTMAEY 239

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VLL +D+I RF  +  E++   G +P   GY  ++ +E+  L ERI  +  + 
Sbjct: 240 FREEGRDVLLFVDNIFRFTQAGSEVSALLGRMPSQVGYQPTLGTEMGELQERI--TSTKT 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D++ DP   +  + LD  I L RS++E+G YP VDPLAS SR+ D  
Sbjct: 298 GSITSLQAVYVPADDYTDPAPATTFAHLDATISLERSISEKGIYPAVDPLASTSRILDPN 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++ + +  ++ R+++ +DI  I G     D      V +   +  F  Q 
Sbjct: 358 IVGEEHYRVATEVQRMLQRYKDLQDIIAILGVEELSDDD-KLTVSRARKLERFFSQP 413


>gi|111283605|gb|ABH09174.1| ATP synthase subunit 1 [Silene latifolia]
 gi|111283607|gb|ABH09175.1| ATP synthase subunit 1 [Silene uniflora]
 gi|111283611|gb|ABH09177.1| ATP synthase subunit 1 [Silene vulgaris]
 gi|111283613|gb|ABH09178.1| ATP synthase subunit 1 [Silene vulgaris]
 gi|111283621|gb|ABH09182.1| ATP synthase subunit 1 [Silene vulgaris]
          Length = 356

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 88/356 (24%), Positives = 151/356 (42%), Gaps = 19/356 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 176

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQYREV 352


>gi|34582342|sp|Q9MU80|ATPB_CHASI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582348|gb|AAF64289.1| ATP synthase beta subunit [Chamaedorea seifrizii]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|326382092|ref|ZP_08203785.1| F0F1 ATP synthase subunit alpha [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199518|gb|EGD56699.1| F0F1 ATP synthase subunit alpha [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 544

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/444 (22%), Positives = 177/444 (39%), Gaps = 24/444 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +A   ED       +  G ++        V+ L       + +   G      G  + 
Sbjct: 13  SAIASYTEDVGNQASREEIGTVTDTGDGIAHVSGL-PGAMANELLEFPGG---IRGVALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           ++LD V    +G  E I  G  V   G    +     + GRVI+ LG PIDG  ++ + +
Sbjct: 69  LDLDEVGAVILGDSENIEEGQEVKRTGNVLSVPVGDKFLGRVIDPLGAPIDGLGAI-ESE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
               +  +    + RQ VE+   TGI+ +D  T +  GQR  V      GK       +L
Sbjct: 128 GDRVLELQAASVLERQPVEESLATGIKAVDAMTAIGRGQRQLVIGDRKTGKTALCIDAIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +  A     D     + I   VG++G  +               + +V A + +S   + 
Sbjct: 188 NQKANWATGDPEKQVRCIYVAVGQKGSTIAGVKSALEEAGAMEYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T   + +++  +G +VL++ D +++ A + R I+      P    YP  VF    R
Sbjct: 248 LAPYTGSALGQHWMYQGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      E   G++T +  +    ++ +  I  +V SI DG + L   L  +G  P 
Sbjct: 308 LLERCAKLSDELGGGSMTGLPIIETKANDVSAFIPTNVISITDGQVFLESDLFNKGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A +   K +  SL   + +F E         +   +D      + + 
Sbjct: 368 INVGISVSRVGGAAQTKGLKDVSGSLRLELAQFRELE---AFSAFASDLDAASKAQLERG 424

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEI 433
               + LKQ   S ++ ED    +
Sbjct: 425 ARWVELLKQDQYSPVAVEDQIVSL 448


>gi|42559066|gb|AAS20219.1| ATP synthase beta subunit [Petermannia cirrosa]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIADSKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|20269428|gb|AAM17941.1| ATP synthase beta subunit [Marcgraviastrum mixtum]
          Length = 448

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +G  I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 13  KGRDTVGHPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 72

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 73  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKI 131

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 132 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNFA 191

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E+   
Sbjct: 192 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVFAL 251

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G++P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 252 LGKMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 309

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 310 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 369

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 370 ILGLDELSEED-RLXVARARKIERFLSQP 397


>gi|13236750|gb|AAK14680.1| ATP synthase beta subunit [Orania trispatha]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708548|emb|CAB89970.1| ATP synthase beta subunit [Pleea tenuifolia]
          Length = 488

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAXPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|75326821|sp|Q7HDI4|ATPB_ACRAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75326826|sp|Q7HHW4|ATPB_COCNU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75326836|sp|Q7HHX4|ATPB_ROYRE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|75326847|sp|Q7HHY5|ATPB_HYPCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582354|gb|AAF64292.1| ATP synthase beta subunit [Podococcus barteri]
 gi|13236724|gb|AAK14667.1| ATP synthase beta subunit [Borassus flabellifer]
 gi|13236726|gb|AAK14668.1| ATP synthase beta subunit [Hyphaene coriacea]
 gi|13236734|gb|AAK14672.1| ATP synthase beta subunit [Pseudophoenix vinifera]
 gi|13236736|gb|AAK14673.1| ATP synthase beta subunit [Ravenea hildebrandtii]
 gi|13236746|gb|AAK14678.1| ATP synthase beta subunit [Socratea exorrhiza]
 gi|13236752|gb|AAK14681.1| ATP synthase beta subunit [Manicaria saccifera]
 gi|13236758|gb|AAK14684.1| ATP synthase beta subunit [Dypsis lastelliana]
 gi|13236762|gb|AAK14686.1| ATP synthase beta subunit [Roystonea regia]
 gi|13236764|gb|AAK14687.1| ATP synthase beta subunit [Chambeyronia macrocarpa]
 gi|13236766|gb|AAK14688.1| ATP synthase beta subunit [Kentiopsis oliviformis]
 gi|13236776|gb|AAK14693.1| ATP synthase beta subunit [Ptychosperma burretianum]
 gi|13236778|gb|AAK14694.1| ATP synthase beta subunit [Veitchia sessilifolia]
 gi|13236780|gb|AAK14695.1| ATP synthase beta subunit [Areca vestiaria]
 gi|13236788|gb|AAK14699.1| ATP synthase beta subunit [Calyptrocalyx stenocrista]
 gi|13236790|gb|AAK14700.1| ATP synthase beta subunit [Cyphophoenix nucele]
 gi|13236796|gb|AAK14703.1| ATP synthase beta subunit [Oncosperma tigillarium]
 gi|13236800|gb|AAK14705.1| ATP synthase beta subunit [Cocos nucifera]
 gi|13236806|gb|AAK14708.1| ATP synthase beta subunit [Astrocaryum alatum]
 gi|13236808|gb|AAK14709.1| ATP synthase beta subunit [Calyptronoma rivalis]
 gi|15430304|gb|AAK95910.1| ATP synthase beta subunit [Oenocarpus bataua]
 gi|15430306|gb|AAK95911.1| ATP synthase beta subunit [Acrocomia aculeata]
 gi|15430314|gb|AAK95915.1| ATP synthase beta subunit [Gastrococos crispa]
 gi|15430316|gb|AAK95916.1| ATP synthase beta subunit [Barcella odora]
 gi|15430318|gb|AAK95917.1| ATP synthase beta subunit [Allagoptera arenaria]
 gi|15430320|gb|AAK95918.1| ATP synthase beta subunit [Butia eriospatha]
 gi|15430322|gb|AAK95919.1| ATP synthase beta subunit [Lytocaryum weddellianum]
 gi|15430324|gb|AAK95920.1| ATP synthase beta subunit [Syagrus glaucescens]
 gi|15430326|gb|AAK95921.1| ATP synthase beta subunit [Voanioala gerardii]
 gi|17933334|gb|AAL48247.1| ATP synthase beta subunit [Archontophoenix alexandrae]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4206566|gb|AAD11714.1| ATP synthase beta subunit [Choisya mollis]
          Length = 444

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 12  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G + 
Sbjct: 72  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKK 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|320008538|gb|ADW03388.1| ATP synthase F1, alpha subunit [Streptomyces flavogriseus ATCC
           33331]
          Length = 523

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 88/432 (20%), Positives = 164/432 (37%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALDSFVQSYQPDAASREEVGTVSVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D   P+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPGVMVRKSVHEPMQTGYKAVDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQYRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GKRMVELLKQPQ 436


>gi|241912856|gb|ACS72106.1| AtpB [Gomphichis crassilabia]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQKINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110915628|gb|ABH02602.1| ATP synthase beta subunit [Dielsiochloa floribunda]
          Length = 475

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 37  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 96

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 97  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 155

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 156 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 215

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 216 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 275

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 276 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 333

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 334 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 393

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 394 D-RLTVARARKIERFLSQP 411


>gi|124361800|gb|ABN09342.1| ATP synthase beta subunit [Tetraclis cf. clusiifolia RNF 959]
          Length = 465

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|61968231|gb|AAX57042.1| ATP synthase beta subunit [Bridelia retusa]
          Length = 479

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGRDTAGQQINVTCEVQQLVGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDDLGPVD-TRATYPIHRSAPAFIELDTELSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSGVINEENIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNTQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +           +    +   + R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGTKHYETAQRVKQTLQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|27435885|gb|AAO13269.1| ATP synthase beta subunit [Magnolia stellata]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|187763109|ref|YP_001876584.1| ATP synthase CF1 beta subunit [Welwitschia mirabilis]
 gi|163311639|gb|ABY26797.1| ATP synthase CF1 beta subunit [Welwitschia mirabilis]
 gi|220983452|dbj|BAH11221.1| ATP synthase CF1 beta chain [Welwitschia mirabilis]
          Length = 483

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/425 (26%), Positives = 179/425 (42%), Gaps = 24/425 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVV---HQGKNSDNLGQVIRINLDI- 69
           S       G I+ I      V+     +       +V     G+      +V ++  +  
Sbjct: 11  STKPEKSVGQITQIIGPVLDVSFSPGNLPNIYNSLIVKGQIDGREISVTCEVQQLLGNNT 70

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    + + D +  I
Sbjct: 71  VRAVAMSATDGLKRGMKVIDTGAPLSVPVGKATLGRIFNVLGEPVDNLGPV-ETDKTSPI 129

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 130 HRSAPTFPELDTNLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 189

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R     T
Sbjct: 190 HGGVSVFGGVGERTREGNDLYMEMKQSGVINEKNITESKVALVYGQMNEPPGARMRVGFT 249

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+ +AEYF      +VLL +D+I RF  +  EI+   G +P A GY  ++ +E+  L ER
Sbjct: 250 ALAMAEYFRDVNKQDVLLFIDNIFRFVQAGSEISALLGRMPSAVGYQPTLSTEMGSLQER 309

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 310 I--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 367

Query: 357 VSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +    +   + R++E +DI  I G     +      V +   I  
Sbjct: 368 TSTMLQPGIVGEEHYETAQGVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIER 426

Query: 416 FLKQS 420
           FL Q 
Sbjct: 427 FLSQP 431


>gi|110915580|gb|ABH02578.1| ATP synthase beta subunit [Aniselytron treutleri]
          Length = 490

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  +  +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSXLLGRMPXAXGYQPTFSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAIXGLDELSEED-RLTVARARKIERFLSQP 426


>gi|37720995|gb|AAN32500.1| ATP synthase beta subunit [Ixiolirion tataricum]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DIVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +D+  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDMIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|296117269|ref|ZP_06835860.1| F0F1 ATP synthase subunit beta [Gluconacetobacter hansenii ATCC
           23769]
 gi|295976162|gb|EFG82949.1| F0F1 ATP synthase subunit beta [Gluconacetobacter hansenii ATCC
           23769]
          Length = 493

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/431 (25%), Positives = 181/431 (41%), Gaps = 24/431 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V        + D +         + +V   I    V    +   + +S
Sbjct: 24  GRVTQIRGAVVDVQFEGTLPHILDALHVSLNGQTLVLEVAQEIGEHEVRCIAMDTTDGLS 83

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+PID    +        I    P    +   
Sbjct: 84  RGTEVVATGSQITVPVGPGTLGRILNVIGEPIDDRGPVL-AKGRSPIHRSAPAFDEQAAA 142

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         + + VGER
Sbjct: 143 TEILPTGIKVVDLLCPYLKGGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGER 202

Query: 199 GREVREFIEDYLGDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            RE  +   +     +           K  +V    +E P  R    L+ VT+AEYF   
Sbjct: 203 TREGNDLYYEMQDAGVIKLDGDSTEGSKVALVYGQMNEPPGARARVALSGVTVAEYFRDV 262

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+I
Sbjct: 263 EGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSI 320

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V +V V  D+  DP   +  + LD   VLNRS+AE G YP VDPL S SR  D     
Sbjct: 321 TSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVG 380

Query: 368 D-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           D   ++   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 381 DEHYQVARDVQRILQTYKSLQDIIAILGMDELSEDD-KLVVARARRIQRFLSQP---FHV 436

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 437 AEVFTGAPGKL 447


>gi|254498170|ref|ZP_05110920.1| hypothetical protein LDG_2536 [Legionella drancourtii LLAP12]
 gi|254352609|gb|EET11394.1| hypothetical protein LDG_2536 [Legionella drancourtii LLAP12]
          Length = 445

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 174/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G    + G   ++       GR+++ LG+P+D    +   D
Sbjct: 32  LGDGVVRTIAMGTTDGLKRGLKAQNTGHPIQVPVGKKTLGRIMDVLGRPVDDAGPID-AD 90

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P    +   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 91  EHWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIR 150

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 151 NIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 210

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 211 TMAEKFRDEGRDVLLFVDNIYRYTLAGVEVSALLGRMPSAVGYQPTLAEEMGMLQERI-- 268

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR
Sbjct: 269 TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSR 328

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +   + R++E +DI  I G     +    + V +   I  FL 
Sbjct: 329 QLDPLVVGQEHYDTARRVQQTLQRYKELKDIIAILGMDELSEED-KRVVTRARKIQRFLS 387

Query: 419 QS 420
           Q 
Sbjct: 388 QP 389


>gi|242806501|ref|XP_002484756.1| ATP synthase F1, beta subunit, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218715381|gb|EED14803.1| ATP synthase F1, beta subunit, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 520

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 117/449 (26%), Positives = 190/449 (42%), Gaps = 24/449 (5%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQ 61
             L  L+        NLV   G I  +      V   S+ +  + + +         + +
Sbjct: 32  NALPALSARFASTDANLV---GKIHQVIGAVVDVKFDSESLPPILNALETDNNGQKLVLE 88

Query: 62  V-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           V   +   +V    +   E ++ G      G    I       GR++N  G PID    +
Sbjct: 89  VAQHLGESVVRTIAMDGTEGLTRGAPAKDTGSPISIPVGPGTLGRIMNVTGDPIDERGPI 148

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            K      I ++ P    +    +   TGI+V+D+  P   G +IG+F G+G+GK+  + 
Sbjct: 149 -KATKYAPIHTEPPSFAEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQ 207

Query: 180 MFARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPIL 230
               +        S+   VGER RE  +   +         +   K  +V    +E P  
Sbjct: 208 ELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETGVIQLEGESKVALVFGQMNEPPGA 267

Query: 231 RKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R    LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  +
Sbjct: 268 RARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVD 327

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +  + ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP
Sbjct: 328 MGVMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYP 385

Query: 350 PVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
            VDPL S SR+ D      D  +  S +  ++  ++  +DI  I G     +      V 
Sbjct: 386 AVDPLDSKSRMLDPRVVGEDHYQTASRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVE 444

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   +  FL Q     +   VF  I  KL
Sbjct: 445 RARKLQRFLSQP---FTVAQVFTGIEGKL 470


>gi|134096552|ref|YP_001101627.1| F0F1 ATP synthase subunit beta [Herminiimonas arsenicoxydans]
 gi|166201712|sp|A4GAG9|ATPB_HERAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|133740455|emb|CAL63506.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Herminiimonas arsenicoxydans]
          Length = 466

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 168/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + +  G ++ + G    +       GR+++ LG PID    +   +
Sbjct: 45  LGDGIVRTIALGTSDGLRRGMIIQNTGNPITVPVGKATLGRIMDVLGNPIDECGPVS-HE 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  K P        +   +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 RTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDY--------LGDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPENSKVAMVYGQMNEPPGNRL 223

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ R
Sbjct: 224 RVALTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGR 283

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VD
Sbjct: 284 LQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVD 341

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      D      ++   + R++E RDI  I G    +       V +  
Sbjct: 342 PLDSTSRQLDPLVVGQDHYDTARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLLVARAR 400

Query: 412 IIYDFLKQS 420
            +  FL Q 
Sbjct: 401 KMQRFLSQP 409


>gi|13236794|gb|AAK14702.1| ATP synthase beta subunit [Hydriastele wendlandiana]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDXVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|295136979|ref|YP_003587525.1| ATP synthase CF1 beta subunit [Pisum sativum]
 gi|114560|sp|P05037|ATPB_PEA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|12148|emb|CAA27481.1| unnamed protein product [Pisum sativum]
 gi|293338551|gb|ADE43524.1| ATP synthase CF1 beta subunit [Pisum sativum]
          Length = 491

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ QG   D +G+ I +  ++        +    
Sbjct: 21  GRITQIIGPVLDVVFPPGKMPYIYNALIVQG--RDTVGKQINVTCEVQQLLGNNRIRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLKRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTQLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESRVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +D+  I G     +      V +   I  F  Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDMIAILGLDEVSEED-RLTVARARKIERFFSQP 434


>gi|194333725|ref|YP_002015585.1| F0F1 ATP synthase subunit alpha [Prosthecochloris aestuarii DSM
           271]
 gi|194311543|gb|ACF45938.1| alternate F1F0 ATPase, F1 subunit alpha [Prosthecochloris aestuarii
           DSM 271]
          Length = 508

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/432 (25%), Positives = 191/432 (44%), Gaps = 15/432 (3%)

Query: 2   QKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +  L  + +  E Y  ++  V+ GYI+++++    V  L   V   + +   G   +  G
Sbjct: 10  ESALGRIEKARERYVADIRPVEAGYITTVSNGIARVEGL-PGVGFEELLRFPG---NLYG 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               I++D + +  +G    ++ GD V   GR   +       GRVI+ LG  +DG    
Sbjct: 66  IAFNIDIDDIGVVLLGDYSCLNAGDRVERTGRVMDVPVGERLIGRVIDPLGNSLDGKGPP 125

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
                 + I    PP M+R  V    +TGI V+D   P+  GQR  +      GK+ +  
Sbjct: 126 DCHK-RLPIERPAPPIMDRAPVRVPLQTGIMVVDALVPVGRGQRELILGDRQTGKTAVAI 184

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
            ++  + D     I   +G++   V + + +         ++VVV   ++   ++ ++P 
Sbjct: 185 SAILNQHDKDVLCIYCAIGQKASGVAKVVAELRRRGAMDYTIVVVTEGNDPSGMQYISPY 244

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +I EYF  +G +VL++ D +T  A + RE++      P    YP  +F    RLLER
Sbjct: 245 AATSIGEYFMEQGRDVLIVYDDLTNHARAYRELSLLLKRPPGREAYPGDIFYIHSRLLER 304

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                 +   G++TA+  +  +  N +  I  ++ SI DG I L+  L E G  P +D  
Sbjct: 305 ATHLGPDLGGGSMTALPVIETEAQNISAYIPTNLISITDGQIFLSPRLFELGILPAIDIG 364

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+  KA  +  +++  +L     +FEE  +    G     +D    K +     I 
Sbjct: 365 KSVSRVGGKAQLSAYREVTGALKLGFSQFEELENFARFG---ARLDEGTRKVLRHGERIR 421

Query: 415 DFLKQSPSDLSS 426
           +  KQ   +L +
Sbjct: 422 ECFKQDEYELLT 433


>gi|327395850|dbj|BAK13272.1| ATP synthase beta chain AtpD [Pantoea ananatis AJ13355]
          Length = 465

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/412 (27%), Positives = 185/412 (44%), Gaps = 15/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MAAGKIVQIIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM----EIMSKVP 133
           + +  G  V    +  ++       GR++N LG+PID    L + D S      I    P
Sbjct: 61  DGLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLTEEDGSAVEVSSIHRPAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     
Sbjct: 121 SYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYS 180

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G
Sbjct: 181 VFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 241 RDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +
Sbjct: 299 VQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 HYDVARGVQSLLQRYQELKDIIAILGMDELSEED-KLLVARARKIQRFLSQP 409


>gi|317502825|ref|ZP_07960928.1| ATP synthase F1 sector alpha subunit [Prevotella salivae DSM 15606]
 gi|315666065|gb|EFV05629.1| ATP synthase F1 sector alpha subunit [Prevotella salivae DSM 15606]
          Length = 528

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/428 (21%), Positives = 166/428 (38%), Gaps = 37/428 (8%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + ++      V  L + V   + +  +      +  V+ +  D +    +G    I  
Sbjct: 31  GTVLTVADGVARVYGL-RNVEASELLEFENG---TMAIVMNLEEDNIGCILLGPTSGIKE 86

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRV 141
           G+ V    R   I  +  + GRV+N LG+ IDG   +   D   M +  K P  + RQ V
Sbjct: 87  GETVKRTHRIASIMVNDNFLGRVVNPLGQAIDGLGDIDLTDAFEMPLDRKAPGVIYRQPV 146

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVIISL 194
           ++  +TG++ +D   P+  GQR  +      GK+ +      +             I   
Sbjct: 147 KEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAIDTILNQKSFYDAGKPVYCIYVA 206

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +G++   V   ++          +++V AT+ +   ++  AP     I EYF  +G + L
Sbjct: 207 IGQKASTVATLVQTLKDHGALPYTIIVSATAADPAAMQYYAPFAGAAIGEYFRDRGLSAL 266

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE---------- 303
           ++ D +++ A + RE++           YP  VF    RLLER      +          
Sbjct: 267 VVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINNQQEIAEQMNDL 326

Query: 304 ----------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
                      G++TA+  V     + +  I  +V SI DG I L  +L  +G  P ++ 
Sbjct: 327 PESMKGHVRGGGSLTALPIVETQAGDVSAYIPTNVISITDGQIYLETNLFNQGFRPAINV 386

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     KK+  +L   + ++ E         +   +D +    + +    
Sbjct: 387 GISVSRVGGSAQIKSMKKVAGTLKLDMAQYRELE---AFSKFSSDMDAVTAMTLDRGRKN 443

Query: 414 YDFLKQSP 421
              L Q  
Sbjct: 444 NQLLIQPQ 451


>gi|258652335|ref|YP_003201491.1| F0F1 ATP synthase subunit alpha [Nakamurella multipartita DSM
           44233]
 gi|258555560|gb|ACV78502.1| ATP synthase F1, alpha subunit [Nakamurella multipartita DSM 44233]
          Length = 547

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/455 (21%), Positives = 176/455 (38%), Gaps = 28/455 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  + + +    E Y  N   +      G ++       TV  L       + +   G  
Sbjct: 4   LTISPDEIRSAIETYVSNYAPEVTREEVGIVAETGDGIATVEGL-PSAMANELLSFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + +++  +    +G    I  G  V   G    +     + GRV+N LG+PID
Sbjct: 62  --VLGVALNLDVRHIGAVLLGDATSIEEGQQVTRTGEVLSVPVGDAFLGRVVNPLGQPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   ++   +  +    + RQ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 120 GLGEIASDEVRA-LELQAATVVERQGVSEPLQTGIKAIDAMTPIGRGQRQLIIGDRKTGK 178

Query: 175 STLLSMFARSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +      +              + I   VG++G  +    +        + + +V + 
Sbjct: 179 TAVCVDTIINQKQFWETGDPKQQVRCIYVAVGQKGTTIAGVRQSLEDAGALEYTTIVASP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP T   + +++  +G +VL+I D +++ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPYTGSALGQHWMYQGKHVLIIFDDLSKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      E   G++T +  +     + +  I  +V SI DG   L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDELGAGSMTGLPIIETKAGDVSAYIPTNVISITDGQCFLEGD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P V+   SVSR+   A     + +  +L   +  + E       G     +D 
Sbjct: 359 LFNAGVRPAVNVGISVSRVGGAAQIKAMRSVSGTLRLDLSAYRELEAFAAFG---SDLDD 415

Query: 402 ILDKAVHQVPIIYDFLKQSPS-DLSSEDVFQEITK 435
           +  +A+ +   + + LKQ        E+    I  
Sbjct: 416 VSKRALSRGSRLVELLKQPQFTPYPVEEQVVSIWA 450


>gi|224830572|gb|ACN66381.1| ATP synthase beta chain [Sarcopetalum harveyanum]
          Length = 469

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 1   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 58

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 59  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 117

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 118 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 177

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 178 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 237

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 238 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 296 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 355

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|210623313|ref|ZP_03293730.1| hypothetical protein CLOHIR_01680 [Clostridium hiranonis DSM 13275]
 gi|210153714|gb|EEA84720.1| hypothetical protein CLOHIR_01680 [Clostridium hiranonis DSM 13275]
          Length = 464

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 178/408 (43%), Gaps = 15/408 (3%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGE 79
           G +  +      V   +            +        + +V + I  D      +   +
Sbjct: 5   GKVVQVIGAVIDVKFNSGRELPNLFNAIEIEMKDGHKVVAEVTQHIGDDTARCISMNATD 64

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G      G    +       GRV N LG  +D    L +G   M I  + P     
Sbjct: 65  GMVRGADAIDTGAPISVPVGKETLGRVFNVLGNAVDRKGEL-EGVERMPIHRQSPDFDEL 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
           +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + S V
Sbjct: 124 ETHAEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGV 183

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253
           GER RE  +  ++     +  K+ +V    +E P  R    LT +T+AEYF  +   +VL
Sbjct: 184 GERTREGNDLYQEMTESGVLSKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEHQDVL 243

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 244 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSVQAV 301

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  S LD   VL+R ++ +G YP VDPL S SR+ D      +  K 
Sbjct: 302 YVPADDLTDPAPATTFSHLDAKTVLSRQISSQGIYPAVDPLESTSRVLDPKIVGEEHYKT 361

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R+ E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 AREVQSILQRYRELQDIIAILGMDELSDED-KLTVARARKIQKFLSQP 408


>gi|164685656|gb|ABY66774.1| atp1 [Zamia furfuracea]
          Length = 413

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 86/410 (20%), Positives = 154/410 (37%), Gaps = 23/410 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V   S  +  G+ V      S   G  +    + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYG-SNEIQAGEMVEFA---SGVKGIALNPENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSPVPIGRGQREPIIGDRQTGKTAIAIDTISNQKRMNSKGTSESEKLYRVYVAIGQ 175

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++   G D  +  ++V AT+ +    + +AP       EYF   G +  +I 
Sbjct: 176 KRSTVAQLVQILSGADASEYPIIVAATASDPAPPQFLAPYPGCAAGEYFRDNGMHASIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D  ++ A + R+++      P     P  V     RL ER      +   G++TA+  + 
Sbjct: 236 DDPSKQAVAYRQMSLLLRRPPGREASPGDVLYLHSRLSERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     +++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQIRSETELFYRGIRPAINVGLSVSRVGSAAQLKAMRQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           S    + ++ E   +     +   +D       ++   + +  KQ     
Sbjct: 356 SSKPELAQYRE---VAASAQFGSDLDAATQAPSNRGARLTEVPKQPQYPP 402


>gi|155029285|dbj|BAF75523.1| ATP synthase beta subunit [Cheilosa montana]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 D-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPPIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|114509202|gb|ABI75169.1| ATPase alpha subunit [Hydrilla verticillata]
          Length = 361

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 159/365 (43%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR- 94
           V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTTIKEGDLVKRTGSIAD 56

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
           +       GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPVGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAQENAKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L   AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSMIVAATASDPAPLPFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     SE   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSSETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKRVCGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|193212726|ref|YP_001998679.1| F0F1 ATP synthase subunit alpha [Chlorobaculum parvum NCIB 8327]
 gi|193086203|gb|ACF11479.1| alternate F1F0 ATPase, F1 subunit alpha [Chlorobaculum parvum NCIB
           8327]
          Length = 508

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/433 (26%), Positives = 191/433 (44%), Gaps = 15/433 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + K L+++ Q  E +S +L  V+ G + ++ +    V  L   V   + V     + +  
Sbjct: 9   LDKALDSVRQAREGWSADLALVEEGVVRTVLNGIVKVDGL-PGVGYEELVRF---HENLY 64

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G    I+   V +  +G    +  GD  +  GR   +       GRVI+ LG+P+D    
Sbjct: 65  GIAFNIDPGEVGVVLLGDYARLRTGDRAWRTGRVTDVPVGEQLIGRVIDPLGQPLDELGP 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--T 176
           + K      I    PP M+R  V    +TGI+VID   P+  GQR  +      GK+   
Sbjct: 125 V-KTTKRWPIERPAPPIMDRDPVTVPLQTGIKVIDAIVPVGRGQRELILGDRQTGKTSVA 183

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATS-DESPILRKMAP 235
           L +M  +       I   +G++   V + +         +  +V+ T  ++ P L+ +AP
Sbjct: 184 LSAMINQRQNEVLCIYCAIGQKAASVAKAVAVLRDHGAMEHTIVLVTEGNDPPGLQYIAP 243

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A +IAEYF  +G +VL++ D +T  A + RE++      P    +P  +F    RLLE
Sbjct: 244 YAATSIAEYFMQQGRDVLIVYDDLTNHARAYRELSLLLKRPPGREAFPGDIFYIHSRLLE 303

Query: 296 RIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  +  +  N +  I  ++ SI DG + L+ +L E G  P VD 
Sbjct: 304 RATHLRRELGGGSLTALPIIETEAQNISAYIPTNLISITDGQLYLSPTLFELGILPAVDI 363

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  KA  A  + +  SL     +FEE  +    G     +D      +     I
Sbjct: 364 GKSVSRVGGKAQLAAYRAVTGSLKLAYAQFEELENFARFG---TRLDEASRNIIEHGQRI 420

Query: 414 YDFLKQSPSDLSS 426
            +  KQ   D+ S
Sbjct: 421 RECFKQDEFDVLS 433


>gi|75332769|sp|Q95FL8|ATPB_POPTM RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|14718189|gb|AAK72833.1| ATP synthase beta subunit [Populus tremuloides]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I   V   V    +   + + +V +G   D + Q I +  ++        V    
Sbjct: 21  GHIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 79  MSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLRPVDTGTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|213495617|gb|ACJ49078.1| AtpB [Acacia schweinfurthii]
          Length = 428

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        +    +   + +  G  V        +       GR
Sbjct: 6   KGQDTVGQQINVTCEVQQLLGNNRIRAVAMSATDGLMRGMEVIDTKVPLSVPVGGATLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 66  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 125 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 184

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 185 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 245 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 302

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 303 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 362

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 363 ILGLDELSEED-RLTVARARKIERFLSQP 390


>gi|186886287|gb|ACC93546.1| ATPase F1 alpha subunit [Juncus triglumis]
          Length = 358

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 15/352 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVQGLALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GKGALGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          ++   + +     +   VG++   V + ++     N    SV+V AT
Sbjct: 124 TAIAIDTILNQKEMNSKGKENETLYCVYVAVGQKRSTVAQLVQILSEANALDYSVLVAAT 183

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 184 ASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 243

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   
Sbjct: 244 GDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETE 303

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           L   G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 304 LFYRGXRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQXG 355


>gi|110915696|gb|ABH02636.1| ATP synthase beta subunit [Sclerochloa dura]
          Length = 472

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 34  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 93

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 94  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 152

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 153 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 273 QPTLSTEMGSLQERIA--FTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 331 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 391 D-RLTVARARKIERFLSQP 408


>gi|157285255|gb|ABV31367.1| ATPase [Vibrio superstes]
 gi|157285263|gb|ABV31371.1| ATPase [Vibrio superstes]
          Length = 441

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L++ V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAE-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPFADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R
Sbjct: 176 LEESGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDETTKKQLDHGAKVTELMKQKQ--YAPMSVFDQAL 410


>gi|63091887|emb|CAH58795.1| ATP synthase alpha chain [Enterococcus dispar]
          Length = 367

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---FGMAQNLETNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   + +  + +  P  M RQ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGEID-TNKTRPVETLAPGVMQRQSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQNMICIYVAIGQKDSTVRAQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGVRPAIDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDQAT 367


>gi|52082875|gb|AAU26018.1| ATPase beta subunit [Saururus chinensis]
          Length = 475

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 30  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 90  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 148

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 149 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 209 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 268

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 269 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 326

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 327 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 386

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 387 ILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|33327767|gb|AAQ09247.1| ATP synthase beta subunit [Ribes aureum]
          Length = 494

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 170/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 48  GRDTXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGLEVIDTGAPLSVPVGGATLGRI 107

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 108 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGGKIG 166

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 167 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 226

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 227 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 286

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 287 GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 344

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 345 ATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 404

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 405 LGLDELSEED-RLTVARARKIERFLSQP 431


>gi|75333233|sp|Q9BA69|ATPB_ELAOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236804|gb|AAK14707.1| ATP synthase beta subunit [Elaeis oleifera]
          Length = 498

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633411|gb|AAM52180.1| ATP synthase beta subunit [Jacquemontia tamnifolia]
          Length = 490

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRTVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P    
Sbjct: 81  DGLMRGMDVIDMGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TKITSPIHRSAPAFTQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|158602269|gb|ABW74601.1| ATP synthase beta subunit [Eranthis hyemalis]
          Length = 476

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGLEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFXTGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|37720947|gb|AAN32476.1| ATP synthase beta subunit [Narthecium ossifragum]
          Length = 489

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPIDNLGPVDTSTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNPAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|6467936|gb|AAF13235.1|AF197602_1 ATPase beta subunit [Cryptocarya meisneriana]
          Length = 481

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|124361674|gb|ABN09279.1| ATP synthase beta subunit [Diospyros glaucifolia]
 gi|124361688|gb|ABN09286.1| ATP synthase beta subunit [Diospyros lotus]
          Length = 465

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYSALVV---KGRDTVGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRITSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|113910832|gb|ABI48148.1| ATPase beta subunit [Riccardia latifrons]
          Length = 472

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 182/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      +     +   + + ++ +G+NS   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDIAFSPGKMPSIYNSLIVRGQNSA--GQEINVTCEVQQLLGNNEVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +     V   G    +       GR+ N LG+P+D    +   +++  I    P  
Sbjct: 59  ATDGLMREMEVLDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVN-ANITFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +    LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFGHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGDEHYETAQGVKQTLQRYKELQDIIAISGLDELSEED-RSTVARARRIERFLSQP 412


>gi|11034787|gb|AAG27082.1| ATP synthase beta subunit [Cabomba caroliniana]
          Length = 437

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 169/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 2   NVTCEVQQLLGNNRVRAVAMSATDGLRRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVD 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 62  NLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 120

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 121 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQ 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 181 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 240

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 241 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 298

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 299 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 358

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 359 D-RLTVARARKIERFLSQP 376


>gi|289616256|emb|CBI57052.1| unnamed protein product [Sordaria macrospora]
          Length = 519

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 185/428 (43%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V     +   + + +  Q      + +V   +  ++V    +   E +
Sbjct: 49  GKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGL 108

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    I       GR+IN  G PID    + K D    I +  P  + +  
Sbjct: 109 VRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPI-KTDKFRSIHADAPEFVEQST 167

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 168 TAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGE 227

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   +         D   K  +V    +E P  R    LT +TIAEYF  +   
Sbjct: 228 RTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQ 287

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++  ++ ++ ERI  +   KG+IT+V
Sbjct: 288 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGQMQERI--TTTTKGSITSV 345

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      + 
Sbjct: 346 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEH 405

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            +  + +  ++  ++  +DI  I G     +      V +   I  FL Q     +   V
Sbjct: 406 YETATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP---FTVAQV 461

Query: 430 FQEITKKL 437
           F  I  KL
Sbjct: 462 FTGIEGKL 469


>gi|228016960|gb|ACP51784.1| ATP synthase CF1 beta subunit [Pinus banksiana]
          Length = 492

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 117/443 (26%), Positives = 194/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S  +    G I+ I      V+     +  + + +  +G+ +   
Sbjct: 1   MRKNPLVLG-----VSARVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P  HG +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRHGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++T  G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSTLLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|156530085|gb|ABU75139.1| AtpB [Swietenia mahagoni]
          Length = 439

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 170/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG+P+D
Sbjct: 1   NVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 60

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     S  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 61  NLGPVDTLTTS-PIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 119

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 120 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQ 179

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 180 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 239

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 240 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 297

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 298 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 357

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 358 D-RLTVARARKIERFLSQP 375


>gi|113910778|gb|ABI48121.1| ATPase beta subunit [Lepidogyna hodgsoniae]
          Length = 468

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 178/414 (42%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + ++ QG+NS   GQ I +  ++        +    +   + 
Sbjct: 1   IGPVLDAAFSPGKMPNIYNSLIVQGQNSA--GQEINVTCEVQQLLGNNKIRAVAMSATDG 58

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +    +   I    P      
Sbjct: 59  LMRGMRVIDTGGPLSVPVGEATLGRIFNVLGEPVDELGPVEASTI-FPIHRSAPAFTQLD 117

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 118 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG 177

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA T+AEYF   
Sbjct: 178 ERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDI 237

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 238 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  +  D   VL+R LA +G YP VDPL S S +       
Sbjct: 296 TSIQAVYVPADDLTDPAPATTFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 355

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|33327765|gb|AAQ09246.1| ATP synthase beta subunit [Platanus occidentalis]
          Length = 490

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D          S  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGXXXXRTXS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|150035717|gb|ABR67204.1| ATP synthase beta subunit [Aristida adscensionis]
          Length = 432

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+PID    +    
Sbjct: 4   LGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPIDNLGPVDTS- 62

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 63  ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 122

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 123 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARM 182

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 183 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 242

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 243 SLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAV 300

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 301 DPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARA 359

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 360 RKIERFLSQP 369


>gi|18311169|ref|NP_563103.1| F0F1 ATP synthase subunit beta [Clostridium perfringens str. 13]
 gi|110800751|ref|YP_696866.1| F0F1 ATP synthase subunit beta [Clostridium perfringens ATCC 13124]
 gi|168205576|ref|ZP_02631581.1| ATP synthase F1, beta subunit [Clostridium perfringens E str.
           JGS1987]
 gi|168210117|ref|ZP_02635742.1| ATP synthase F1, beta subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|168213709|ref|ZP_02639334.1| ATP synthase F1, beta subunit [Clostridium perfringens CPE str.
           F4969]
 gi|168215816|ref|ZP_02641441.1| ATP synthase F1, beta subunit [Clostridium perfringens NCTC 8239]
 gi|169344156|ref|ZP_02865138.1| ATP synthase F1, beta subunit [Clostridium perfringens C str.
           JGS1495]
 gi|182623961|ref|ZP_02951749.1| ATP synthase F1, beta subunit [Clostridium perfringens D str.
           JGS1721]
 gi|20137355|sp|Q8XID4|ATPB_CLOPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123148561|sp|Q0TNC4|ATPB_CLOP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|18145852|dbj|BAB81893.1| ATP synthase beta subunit [Clostridium perfringens str. 13]
 gi|110675398|gb|ABG84385.1| ATP synthase F1, beta subunit [Clostridium perfringens ATCC 13124]
 gi|169297614|gb|EDS79714.1| ATP synthase F1, beta subunit [Clostridium perfringens C str.
           JGS1495]
 gi|170662906|gb|EDT15589.1| ATP synthase F1, beta subunit [Clostridium perfringens E str.
           JGS1987]
 gi|170711767|gb|EDT23949.1| ATP synthase F1, beta subunit [Clostridium perfringens B str. ATCC
           3626]
 gi|170714819|gb|EDT27001.1| ATP synthase F1, beta subunit [Clostridium perfringens CPE str.
           F4969]
 gi|177910854|gb|EDT73208.1| ATP synthase F1, beta subunit [Clostridium perfringens D str.
           JGS1721]
 gi|182382316|gb|EDT79795.1| ATP synthase F1, beta subunit [Clostridium perfringens NCTC 8239]
          Length = 465

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/406 (28%), Positives = 189/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G +  +      +   +  +        +        + +V   +  DIV    +   E 
Sbjct: 6   GKVVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEG 65

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +    C  GR+ N LGKP+D    +   +    I    P    + 
Sbjct: 66  LRRGVEAVDTGAPISVPVGECVLGRIFNVLGKPLDSGAEVN-NEEKYPIHRPAPSFEEQS 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
            V + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VG
Sbjct: 125 VVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVG 184

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +   + +    +K + +V    +E P  R    LT +T+AEYF  +G +VLL 
Sbjct: 185 ERSREGNDLYYEMMESGVIKNTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT+V +V V
Sbjct: 245 IDNIFRFSQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTTHGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +  ++ S
Sbjct: 303 PADDLTDPAPATTFNHLDAKTVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVAS 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + H++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 363 KVKHILERYKELQDIIAILGVDELADED-KLIVARARRIQKFLSQP 407


>gi|224830576|gb|ACN66383.1| ATP synthase beta chain [Sinomenium acutum]
          Length = 471

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 67  MSATDGLMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSSTTS-PIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 422


>gi|52082868|gb|AAU26015.1| ATPase beta subunit [Piper arborescens]
          Length = 468

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + ++ +G+++     +   +V ++  +  V    + 
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGKQINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 61  ATDGLTRGMEVIDTGTPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|7687974|emb|CAB89708.1| ATP synthase beta subunit [Degeneria vitiensis]
          Length = 498

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   + +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RETVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|17933336|gb|AAL48248.1| ATP synthase beta subunit [Clinostigma savoryanum]
          Length = 497

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|289498341|gb|ADC99209.1| ATP synthase F1 alpha subunit [Vibrio crassostreae]
          Length = 441

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEHYVEEFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|239982325|ref|ZP_04704849.1| F0F1 ATP synthase subunit alpha [Streptomyces albus J1074]
 gi|291454170|ref|ZP_06593560.1| F0F1 ATP synthase subunit alpha [Streptomyces albus J1074]
 gi|291357119|gb|EFE84021.1| F0F1 ATP synthase subunit alpha [Streptomyces albus J1074]
          Length = 530

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 90/447 (20%), Positives = 171/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQAYKPDAASREEVGTVTVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    +  G  V   G    +     + GRV++ LG+PIDG   + + 
Sbjct: 69  NLEEREIGAIVLGEFSGVEEGQPVTRTGEVLSVPVGEGYLGRVVDPLGQPIDGLGEI-ES 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK      T+
Sbjct: 128 TGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 178 LSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++        D       I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRENWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYVHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E         +   +D    + + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRLDLAQFREME---AFATFGSDLDAASKQQLAR 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ     + +ED    +  
Sbjct: 425 GQRLVELLKQDQYQPMPTEDQVVSVWA 451


>gi|183206578|gb|ACC54487.1| ATP synthase beta subunit [Campanula rapunculoides]
          Length = 466

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DNLGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 23  KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGIPLSVPVGGATLGR 82

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 83  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 141

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
            +F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 142 XLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 201

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 202 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 261

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 262 FGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 319

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +   S+   + R++E +DI  
Sbjct: 320 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIIT 379

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 380 ILGLDELSEED-RLTVARARKIERFLSQP 407


>gi|219552268|gb|ACL26849.1| ATP synthase beta chain [Flueggea jullienii]
          Length = 423

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTKAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|123325697|gb|ABM74473.1| ATP synthase beta subunit [Micromelum minutum]
          Length = 462

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|220917661|ref|YP_002492965.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955515|gb|ACL65899.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 452

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 156/407 (38%), Positives = 229/407 (56%), Gaps = 7/407 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEI 81
            G +  + +    V  L   V +G       ++    L +VI        + P+   + +
Sbjct: 22  TGTV--VRAAGLLVEALLPQVPVGTACEIHAQDGAVVLAEVIGFQGGTARLMPLSGIQGV 79

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V       RI+      GRV++A  +P+DG  ++        + +  PPA++R+R
Sbjct: 80  AEGCAVVPRASADRIAVGEALLGRVVDASLRPVDG-GAVPMLRQRTALHASPPPALSRRR 138

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           VE+    GIR ID    +  GQRI V AG G+GKS LL M ARS   D V++ L+GERGR
Sbjct: 139 VERAVPLGIRAIDACLTVGEGQRIAVMAGPGVGKSVLLGMLARSATADVVVVGLIGERGR 198

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EVREF+E  LG  L ++VVVVATSD SP+ R  A + A   AE+F  +G  VLL++DS++
Sbjct: 199 EVREFVERDLGPGLARAVVVVATSDASPLERLRAAMAATAAAEWFRGRGRRVLLLVDSLS 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R A + REI   +GE P  RGYP S F+ LPRL+ER G      G+ITA  +VL +GD+H
Sbjct: 259 RVAQAQREIGLAAGEPPTTRGYPPSAFAILPRLVERAGNDAGP-GSITAFYTVLAEGDDH 317

Query: 321 -NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             DPIAD+ R+ LDGH+VL+R LAE G +P +D LASVSR+ +    A+ + L      +
Sbjct: 318 AGDPIADAARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPAEHRALAREAREV 377

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +    E  D+  +G Y  G +  +D+A+  +  +  FL+Q P++ + 
Sbjct: 378 LSAHREAADLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAERTP 424


>gi|13236702|gb|AAK14656.1| ATP synthase beta subunit [Rhapis subtilis]
          Length = 498

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758891|gb|AAD50865.1| ATP synthase beta subunit [Hemerocallis lilioasphodelus]
          Length = 496

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|110801467|ref|YP_699462.1| F0F1 ATP synthase subunit beta [Clostridium perfringens SM101]
 gi|122956535|sp|Q0SQZ5|ATPB_CLOPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110681968|gb|ABG85338.1| ATP synthase F1, beta subunit [Clostridium perfringens SM101]
          Length = 465

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 116/406 (28%), Positives = 189/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G +  +      +   +  +        +        + +V   +  DIV    +   E 
Sbjct: 6   GKVVQVIGPVVDIKFANDELPNIFNAIHIKMDDGKILVCEVEQHVGDDIVRTIAMEATEG 65

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +    C  GR+ N LGKP+D    +   +    I    P    + 
Sbjct: 66  LRRGVEAVDTGAPISVPVGECVLGRIFNVLGKPLDSGAEVN-NEEKYPIHRPAPSFEEQS 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
            V + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VG
Sbjct: 125 VVPQMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVG 184

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +   + +    +K + +V    +E P  R    LT +T+AEYF  +G +VLL 
Sbjct: 185 ERSREGNDLYYEMMESGVIKNTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT+V +V V
Sbjct: 245 IDNIFRFSQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTTHGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +  ++ S
Sbjct: 303 PADDLTDPAPATTFNHLDAKTVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVAS 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + H++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 363 KVKHILERYKELQDIIAILGVDELADED-KLIVARARRIQKFLSQP 407


>gi|56675525|emb|CAF21942.2| ATP synthase beta subunit [Fagus grandifolia]
          Length = 464

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ + +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQMNVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|37545704|gb|AAM97784.1| ATP synthase beta subunit [Pasithea coerulea]
          Length = 421

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 9   LGXNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TR 67

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 68  TTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 127

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 128 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARM 187

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 188 RVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 247

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 248 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 305

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 306 DPLDSTSTMLQPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 364

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 365 RKIERFLSQP 374


>gi|7708460|emb|CAB90104.1| ATP synthase beta subunit [Kedrostis nana]
          Length = 485

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTAGQEINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVVDTRAPLSVPVGGTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 SFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|7708524|emb|CAB89949.1| ATP synthase beta subunit [Ochna multiflora]
          Length = 484

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGIAVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G LP A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|155573947|dbj|BAF75572.1| ATP synthase beta subunit [Pedilanthus tithymaloides]
          Length = 489

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 71  MSATDGLTRGMGVIDTEAPLSVPVGGTTLGRIFNVLGEPIDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7687962|emb|CAB89703.1| ATP synthase beta subunit [Zygogynum pauciflorum]
          Length = 498

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLEVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTRSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVHGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGSDELSEED-RLTVARARKIERFLSQP 434


>gi|7708620|emb|CAB89983.1| ATP synthase beta subunit [Ribes speciosum]
          Length = 492

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 170/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 48  GRDTXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGLEVIDTGAPLSVPVGGATLGRI 107

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 108 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGGKIG 166

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 167 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 226

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 227 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 286

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 287 GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 344

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 345 ATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 404

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 405 LGLDELSEED-RLTVARARKIERFLSQP 431


>gi|14717976|gb|AAK72730.1| ATP synthase beta subunit [Burmannia biflora]
          Length = 483

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D LGQ I +  ++        V    
Sbjct: 11  GRITQIIGPVLDVVFPPGRLPNIYNALVV--KSRDTLGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMDVIDTGSPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|303325905|ref|ZP_07356348.1| ATP synthase F1, beta subunit [Desulfovibrio sp. 3_1_syn3]
 gi|302863821|gb|EFL86752.1| ATP synthase F1, beta subunit [Desulfovibrio sp. 3_1_syn3]
          Length = 473

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/410 (26%), Positives = 187/410 (45%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS----DNLGQV-IRINLDIVYICPVGI 77
           G +  +      V      +  +   +  +  N+    D + +V   +  ++V    +  
Sbjct: 6   GKVVQVIGAVVDVEFSDGNLPDIFTALEIKNPNNSDAPDLICEVAQHLGDNVVRTIAMDA 65

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GR++N +G+P+D    +   +    I    P   
Sbjct: 66  TEGLVRGMDVVDTGQPIMVPVGKAAVGRILNVIGRPVDELGPVN-AEKYYPIHRPAPGFT 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         + +
Sbjct: 125 DQNTKVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFA 184

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +     + +++ +V    +E P  R    LTA+  AEYF  +   +
Sbjct: 185 GVGERTREGNDLYNELKEAGVLERATLVYGQMNEPPGARARVALTALACAEYFRDEEHQD 244

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +    G+IT+V 
Sbjct: 245 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTNSGSITSVQ 302

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D      +  
Sbjct: 303 AVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHY 362

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 363 SVARRVQMVLQKYKELQDIIAILGMDELSDED-KLTVARARRIQRFLSQP 411


>gi|228016834|gb|ACP51660.1| ATP synthase CF1 beta subunit [Pinus attenuata]
          Length = 492

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 193/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S  +    G I+ I      V+     +  + + +  +G+ +   
Sbjct: 1   MRKNPLVLG-----VSARVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYEIAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|37720951|gb|AAN32478.1| ATP synthase beta subunit [Stemona tuberosa]
          Length = 482

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 35  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 95  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 153

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 154 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 213

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 214 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 274 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 332 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 391

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 392 ILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|17933338|gb|AAL48249.1| ATP synthase beta subunit [Linospadix longicruris]
          Length = 493

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 16  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 73

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    L A+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLIALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|4206512|gb|AAD11687.1| ribulose 1,5-bisphosphate carboxylase [Chloroxylon swietenia]
 gi|4206570|gb|AAD11716.1| ATP synthase beta subunit [Chloroxylon swietenia]
          Length = 464

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 29  KGQDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPVDNFGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|15896119|ref|NP_349468.1| F0F1 ATP synthase subunit beta [Clostridium acetobutylicum ATCC
           824]
 gi|20137589|sp|Q9Z687|ATPB_CLOAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|15025911|gb|AAK80808.1|AE007784_5 FoF1-type ATP synthase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|4323568|gb|AAD16426.1| ATP synthase subunit beta [Clostridium acetobutylicum ATCC 824]
 gi|325510273|gb|ADZ21909.1| F0F1 ATP synthase subunit beta [Clostridium acetobutylicum EA 2018]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 194/423 (45%), Gaps = 16/423 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G I  +      +   ++ +        +  G N   + +V   +  DIV    +   + 
Sbjct: 6   GKIVQVIGPVVDIKFDAENLPDIYNSIEIDMGDNKKLIAEVEQHVGDDIVRTIAMEGTDG 65

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G    + G+   +       GR+ N LG+ ID    +   D    I    P    + 
Sbjct: 66  LKRGMEAVNTGKPISVPVGENVLGRLFNVLGQTIDEAGDMN-ADKYYPIHRPAPTFEEQS 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VG
Sbjct: 125 VQPEMFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVG 184

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG +VLL 
Sbjct: 185 ERTREGNDLYYEMKDSGVINKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V
Sbjct: 245 IDNIFRFTQAGSEVSALLGRIPSAVGYQPTLANEMGALQERI--TSTKQGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R ++  G YP V PL S SR+ D      +  ++ +
Sbjct: 303 PADDLTDPAPATTFTHLDATTVLSREISNLGIYPAVSPLESTSRILDPRIVGEEHYEVAN 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            + H++ R++E +DI  I G     D      V +   +  FL Q+    S  + F  + 
Sbjct: 363 KVKHILERYQELQDIIAILGVDELSDED-RLLVGRARRVQRFLSQA---FSVAEQFTGMK 418

Query: 435 KKL 437
            + 
Sbjct: 419 GQF 421


>gi|183206502|gb|ACC54449.1| ATP synthase beta subunit [Jasione montana]
          Length = 469

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +    D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALIVKA--RDTLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVXERTREGNDLYKEMKESGVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G++  A  Y     +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGKMASAVXYQPXXSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|114509218|gb|ABI75177.1| ATPase alpha subunit [Nechamandra alternifolia]
          Length = 362

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 19/366 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIA 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPTGQSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAKDNAKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   +
Sbjct: 296 SAYIPTNVISITDGQIFLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKRVCGSLKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|63091927|emb|CAH58819.1| ATP synthase alpha chain [Enterococcus hermanniensis]
 gi|63091981|emb|CAH58848.1| ATP synthase alpha chain [Enterococcus hermanniensis]
          Length = 367

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIVLGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGENMIGRVVNPLGQPIDGMGPI-ETSKTRPVEAMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGLDMICIYVAIGQKESTVRSQVETLRK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGAMDYTIVVTAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLVVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGIRPSVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|33318655|gb|AAQ05211.1| ATP synthase beta subunit [Bowenia serrulata]
          Length = 484

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGQDTAGQEIHVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDNLGPVD-ARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL------- 214
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +     +       
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDIS 218

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 219 GSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      + +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTIARARKIERFLSQP 424


>gi|62290664|ref|YP_222457.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 1 str. 9-941]
 gi|82700579|ref|YP_415153.1| F0F1 ATP synthase subunit beta [Brucella melitensis biovar Abortus
           2308]
 gi|189024876|ref|YP_001935644.1| F0F1 ATP synthase subunit beta [Brucella abortus S19]
 gi|237816165|ref|ZP_04595160.1| ATP synthase F1, beta subunit [Brucella abortus str. 2308 A]
 gi|254694444|ref|ZP_05156272.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 3 str. Tulya]
 gi|254698103|ref|ZP_05159931.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254730987|ref|ZP_05189565.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 4 str. 292]
 gi|260547100|ref|ZP_05822838.1| ATP synthase subunit beta [Brucella abortus NCTC 8038]
 gi|260758710|ref|ZP_05871058.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260762544|ref|ZP_05874881.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261214758|ref|ZP_05929039.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 3 str.
           Tulya]
 gi|81309373|sp|Q57B88|ATPB_BRUAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573512|sp|Q2YLE6|ATPB_BRUA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|62196796|gb|AAX75096.1| AtpD, ATP synthase F1, beta subunit [Brucella abortus bv. 1 str.
           9-941]
 gi|82616680|emb|CAJ11763.1| Antifreeze protein, type I:H+-transporting two-sector ATPase,
           alpha/beta subunit, central region:H+-transporting
           two-sector A [Brucella melitensis biovar Abortus 2308]
 gi|189020448|gb|ACD73170.1| ATP synthase subunit B [Brucella abortus S19]
 gi|237788627|gb|EEP62840.1| ATP synthase F1, beta subunit [Brucella abortus str. 2308 A]
 gi|260095465|gb|EEW79343.1| ATP synthase subunit beta [Brucella abortus NCTC 8038]
 gi|260669028|gb|EEX55968.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 4 str.
           292]
 gi|260672970|gb|EEX59791.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260916365|gb|EEX83226.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 3 str.
           Tulya]
          Length = 521

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 184/411 (44%), Gaps = 19/411 (4%)

Query: 25  YISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           +I+ +      V     Q   + + +    +    + +V   +  D V    +   E + 
Sbjct: 54  HITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLV 113

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G    +       GR++N +G+P+D    + K   +  I    P  + +   
Sbjct: 114 RGQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTE 172

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 173 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 233 TREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 293 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      + 
Sbjct: 351 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMIDPKVVGEEH 410

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 411 YAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 460


>gi|461568|sp|Q05373|ATPB_SYNP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|480499|pir||S36972 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain -
           Synechococcus sp. (PCC 6716)
 gi|49227|emb|CAA49882.1| ATP synthase (beta) [Synechococcus sp.]
          Length = 482

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/421 (25%), Positives = 188/421 (44%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNL-----GQVIRINLDI-VYIC 73
              G+I+ +      +   S  +  + + +  QGKN+  L      +V ++  D  V   
Sbjct: 8   TNVGFITQVIGPVIDIEFPSGKMPAIYNALRIQGKNAAGLDVAVTCEVQQLLGDNRVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G      G    +       GR+ N LG+P+D    +   + ++ I    
Sbjct: 68  AMSSTDGLVRGMEAVDTGAPISVPVGTATLGRIFNVLGEPVDEKGEVNISE-TLPIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P     +     F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +        
Sbjct: 127 PSFTELETKPSVFETGIKVIDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGV 186

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+
Sbjct: 187 SVFAGVGERTREGNDLYNEMIESGVIDKDDPSKSKIALVYGQMNEPPGARMRVGLSGLTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +
Sbjct: 305 STMEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSNM 364

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +   ++   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 365 LQPDIVGSEHYQTARAVQATLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|329296425|ref|ZP_08253761.1| F0F1 ATP synthase subunit beta [Plautia stali symbiont]
          Length = 465

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 114/412 (27%), Positives = 185/412 (44%), Gaps = 15/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MAAGKIVQIIGAVVDVEFPQDAVPQVYSALEVKNGDTRLVLEVQQQLGGGVVRTIAMGSS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM----EIMSKVP 133
           + +  G  V    +  ++       GR++N LG+PID    L + D S      I    P
Sbjct: 61  DGLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSAVEVSSIHRAAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     
Sbjct: 121 SYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYS 180

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G
Sbjct: 181 VFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 241 RDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +
Sbjct: 299 VQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 HYDVARGVQSLLQRYQELKDIIAILGMDELSEED-KLLVARARKIQRFLSQP 409


>gi|14717946|gb|AAK72715.1| ATP synthase beta subunit [Asteropeia micraster]
          Length = 483

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G+  D  GQ + +  ++        V    
Sbjct: 10  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTAGQPVSVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQKVKQTLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|14717956|gb|AAK72720.1| ATP synthase beta subunit [Batis maritima]
          Length = 483

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D + Q I +  ++        V    
Sbjct: 14  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVSQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRITSPIHKSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+ K+ L+     +       +S
Sbjct: 131 AFIQLHTKLSIFETGIKVVDLLAPYRXGGKIGLFGGAGVCKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARRIERFLSQP 427


>gi|3660251|pdb|1NBM|D Chain D, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
 gi|3660253|pdb|1NBM|F Chain F, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
          Length = 480

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 192/431 (44%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 12  ATTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 71

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 72  GLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFVEM 130

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 131 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 190

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 191 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 250

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 251 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 309 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 368

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 369 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 424

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 425 AEVFTGHLGKL 435


>gi|157285037|gb|ABV31258.1| ATPase [Vibrio diazotrophicus]
 gi|157285073|gb|ABV31276.1| ATPase [Vibrio diazotrophicus]
 gi|157285125|gb|ABV31302.1| ATPase [Vibrio diazotrophicus]
 gi|157285257|gb|ABV31368.1| ATPase [Vibrio diazotrophicus]
          Length = 441

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 93/420 (22%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDAMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEVYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|157678801|dbj|BAF80641.1| ATP synthase CF1 alpha chain [Pavlova lutheri]
          Length = 357

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 11/361 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            V  L Q V  G+ +         +G  + +  D V +  +G G +I  G  V   G+  
Sbjct: 1   RVYGLEQ-VMAGELLEFADG---TVGIALNLETDNVGVVLMGDGRDILEGSTVKATGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I     + GRV++AL +PIDG  ++   +  + I S  P  + RQ V +  +TGI  ID
Sbjct: 57  QIPVGESYLGRVVDALARPIDGKGNISTSETRL-IESMAPGIIARQSVFEPLQTGITAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+ +      +   +    +   +G++   V + +     
Sbjct: 116 AMIPIGRGQRELIIGDRQTGKTAVAIDTIINQKSEDCVCVYIAIGQKASSVAQVVTALDE 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 +++V A +++   L+ +AP T   +AEYF   G   L++ D +++ A + R ++
Sbjct: 176 AGALGYTIIVAANTNDPATLQYIAPYTGAALAEYFMYNGRATLVVYDDLSKQASAYRPMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER          G++TA+  +     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLNSALGGGSMTALPIIETQAGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  L   G  P ++   SVSR+   A +   K++   L   + +F E   
Sbjct: 296 ISITDGQIFLSGDLFNSGIRPAINVGISVSRVGSAAQTKAMKQVAGRLKLELAQFAELEA 355

Query: 389 I 389
            
Sbjct: 356 F 356


>gi|63091791|emb|CAH58746.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|63091811|emb|CAH58756.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|63091821|emb|CAH58761.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|63091895|emb|CAH58799.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|63091929|emb|CAH58821.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|72534375|emb|CAH58806.1| ATP synthase alpha chain [Enterococcus sp. LMG 12310]
 gi|157850678|gb|ABV90179.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|157850680|gb|ABV90180.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|157850682|gb|ABV90181.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|157850684|gb|ABV90182.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|157850686|gb|ABV90183.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|157850688|gb|ABV90184.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|157850690|gb|ABV90185.1| ATP synthase alpha chain [Enterococcus casseliflavus]
 gi|157850692|gb|ABV90186.1| ATP synthase alpha chain [Enterococcus casseliflavus]
          Length = 367

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + + D S  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGPI-ETDKSRPVEAAAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+T+      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTTIAIDAIINQKGQDMICIYVAIGQKDSTVRAQVETLRR 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPLLYIAPYAGAAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYSGVRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|61968201|gb|AAX57027.1| ATP synthase beta subunit [Amanoa strobilacea]
          Length = 479

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGDPLSVPVGGVTLGRIFNVLGEPVDDLGPID-TRATYPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKDSGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAVKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGPEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|75336622|sp|Q9MU30|ATPB_MYRFG RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688027|emb|CAB89717.1| ATP synthase beta subunit [Myristica fragrans]
 gi|14718145|gb|AAK72811.1| ATP synthase beta subunit [Myristica fragrans]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758869|gb|AAD50843.1| ATP synthase beta subunit [Molineria capitulata]
          Length = 496

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRLVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|307566509|ref|ZP_07628939.1| ATP synthase F1, alpha subunit [Prevotella amnii CRIS 21A-A]
 gi|307344791|gb|EFN90198.1| ATP synthase F1, alpha subunit [Prevotella amnii CRIS 21A-A]
          Length = 527

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 93/430 (21%), Positives = 165/430 (38%), Gaps = 37/430 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + +++     +  L +     + +  +      +  V+ +  D V    +G    I
Sbjct: 29  EVGTVLTVSDGVARIYGL-RNAEANELLEFENG---TMAIVMNLEEDNVGCILLGPTTGI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQ 139
             G  V    R   I  +  + GRV+N LG+ IDG   L       M +  K P  + RQ
Sbjct: 85  KEGQSVKRTHRIASIRVNDNFLGRVVNPLGEAIDGKGELDLTNSFEMPLDRKAPGVIYRQ 144

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVII 192
            V++  +TGI+ +D   P+  GQR  +      GK+ +      +             I 
Sbjct: 145 PVKEPLQTGIKAVDSMIPIGRGQRELIIGDRQTGKTAVAIDTIINQKSFYEEGNPVYCIY 204

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             +G++   V   ++          ++VV AT+ +   ++  AP     I EYF  +G +
Sbjct: 205 VAIGQKASTVAALVQTLSDHGALPYTIVVSATAADPAAMQYYAPFAGAAIGEYFRDRGLS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-------- 303
            L++ D +++ A + RE++           YP  VF    RLLER      E        
Sbjct: 265 ALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERAARINNEQEIAEKMN 324

Query: 304 ------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
                        G++TA+  +     + +  I  +V SI DG I L   L  +G  P +
Sbjct: 325 DLPESLKGHVRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIYLESHLFNQGFRPAI 384

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           +   SVSR+   A     KK+  +L   + ++ E         +   +D +    + +  
Sbjct: 385 NVGISVSRVGGSAQIKSMKKVAGTLKIDMAQYRELE---TFSKFSSDMDNVTAMTLDRGR 441

Query: 412 IIYDFLKQSP 421
                L QS 
Sbjct: 442 KNNQLLIQSQ 451


>gi|61968291|gb|AAX57072.1| ATP synthase beta subunit [Phyllanthus lokohensis]
          Length = 479

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     Q   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSAIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  D    +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDLAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARAQKIERFLSQP 422


>gi|5001577|gb|AAD37035.1|AF092109_1 ATP synthase beta subunit [Podophyllum peltatum]
          Length = 492

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+  D LGQ I +  ++        +    
Sbjct: 15  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRIRAVA 72

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|4206560|gb|AAD11711.1| ATP synthase beta subunit [Melicope ternata]
          Length = 468

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E I  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQEXI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|11467696|ref|NP_050748.1| ATP synthase CF1 beta subunit [Guillardia theta]
 gi|5915725|sp|O78491|ATPB_GUITH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|3603021|gb|AAC35682.1| ATP synthase CF1 subunit b [Guillardia theta]
          Length = 475

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 20/420 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICP 74
            N     GYI+ I      V     +   + + ++     +    +V ++  +  V    
Sbjct: 2   TNTATNIGYITQIIGPVVDVEFTTGKLPQIYNAIIIGSGENAVTCEVQQLLGNNKVRAVS 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +   D ++ I    P
Sbjct: 62  MTSTDGLKRGMEVTDTQAPISVPVGKATLGRIFNVLGQPVDNMGDVAL-DQTLPIHRGSP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFTQLETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESKVINESNLGESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  S LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 299 TTEGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRNLAAKGIYPAVDPLDSTSTML 358

Query: 362 D-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +      ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 359 QINIVGQEHYSCAQNVKETLQRYKELQDIIAILGLDELSEED-RQIVARARKIERFLSQP 417


>gi|255280303|ref|ZP_05344858.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
 gi|255269394|gb|EET62599.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
          Length = 463

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 187/409 (45%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I+ I      +     +   + D +     +   L  V+     +  D V    +G  
Sbjct: 7   GKITQIIGAVLDIKFPEGKLPGIYDAIHIPTADGKTL--VVEVAQHLGDDTVKCIAMGPT 64

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N +G+PID  ++  K    + I    P    
Sbjct: 65  DGLVRGMEAISTGAPIMVPVGEKTLGRIFNVIGEPIDNKEA-PKDVQYLPIHRDAPDFEE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +    +  +TGI+V+D+  P   G + G+F G+G+GK+ L+    R+   +    S+   
Sbjct: 124 QATSTEMLETGIKVVDLLCPYQKGGKTGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G  +V
Sbjct: 184 VGERTREGNDLYHEMSESGVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDEGGKDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKHGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D      +  K
Sbjct: 302 VYVPADDLTDPAPATTFAHLDATTVLSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 VARGVQEILQKYKELQDIIAILGMDELSEDE-KLIVSRARKIQRFLSQP 409


>gi|309322170|ref|YP_003934085.1| ATP synthase CF1 beta subunit [Geranium palmatum]
 gi|197132378|gb|ACH47707.1| ATP synthase CF1 beta subunit [Geranium palmatum]
 gi|300069263|gb|ADJ66384.1| ATP synthase CF1 beta subunit [Geranium palmatum]
          Length = 497

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 119/428 (27%), Positives = 190/428 (44%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
              L  + G I+ I   V   V    +   + + +V QG   D +GQ I +  ++     
Sbjct: 12  DSTLKKKRGRIAQIIGPVLDIVFPKGKMPYIYNALVVQG--RDTVGQQIYVTCEVQQLLG 69

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +  G  V   G    +       GR+ N LG+PID    +     S
Sbjct: 70  NNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTLTTS 129

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 130 -PIHRSAPDFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 188

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +  ++               K  +V    +E P  R   
Sbjct: 189 AKAHGGVSVFGGVGERTREGNDLYKEMKESGVINDQKIAESKVALVYGQMNEPPGARMRV 248

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 249 GLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSL 308

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 309 QERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDP 366

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +      SA+  ++   +   + R++E +DI  I G     +      V +   
Sbjct: 367 LDSTSTMLQPRIVSAEHYEIAQRVKETLQRYKELQDIISILGLDELSEDD-RLTVARARK 425

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 426 IERFLSQP 433


>gi|169351551|ref|ZP_02868489.1| hypothetical protein CLOSPI_02331 [Clostridium spiroforme DSM 1552]
 gi|169291773|gb|EDS73906.1| hypothetical protein CLOSPI_02331 [Clostridium spiroforme DSM 1552]
          Length = 468

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/363 (29%), Positives = 176/363 (48%), Gaps = 10/363 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  DIV    +G  + +  G           +       GR+ N LG+PIDG ++LG   
Sbjct: 50  IGDDIVRCVAMGPTDGVKRGMEAIDTRQPISVPVGNATLGRMFNVLGQPIDGKEALGDDV 109

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I    P    ++   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  F  
Sbjct: 110 KKMPIHRSAPTYAQQRTETEILETGIKVVDLICPFIKGGKIGLFGGAGVGKTVLIQEFIN 169

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +   +     +  K+ +V    +E P  R    LT +
Sbjct: 170 NIATQHGGLSVFAGVGERSREGNDLYYEMKESGVLSKTTLVFGQMNEPPGARLRVALTGL 229

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AE F  +   +VLL +D+I RF  +  E++   G +P   GY  ++ +E+  L ERI 
Sbjct: 230 TMAEEFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRVPSQAGYQPTLATEMGALQERI- 288

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V +V V  D+  DP   +  + LD  +VL+RS+A  G YP VDPL S S
Sbjct: 289 -TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDAKVVLDRSIAALGIYPAVDPLNSSS 347

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R  D      +  ++   +  ++ RF+E +DI  I G     +      V +   + ++L
Sbjct: 348 RALDPLVVGKEHYEVAHGVQQILQRFQELQDIIAILGMDELGEED-KLTVARARRVRNYL 406

Query: 418 KQS 420
            Q 
Sbjct: 407 SQP 409


>gi|61968245|gb|AAX57049.1| ATP synthase beta subunit [Gonatogyne brasiliensis]
          Length = 479

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQIYVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYREMKESGVINEENLAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|17224782|gb|AAL37112.1| ATP synthase beta subunit [Stemona japonica]
          Length = 497

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D   Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 49  KGRDTAAQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 109 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 167

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 168 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 227

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 228 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 287

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 288 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 345

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 346 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 405

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 406 ILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|17224753|gb|AAL37098.1| ATP synthase beta subunit [Tacca palmata]
          Length = 489

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVVFSPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|220932616|ref|YP_002509524.1| ATP synthase F1, beta subunit [Halothermothrix orenii H 168]
 gi|219993926|gb|ACL70529.1| ATP synthase F1, beta subunit [Halothermothrix orenii H 168]
          Length = 487

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/378 (28%), Positives = 184/378 (48%), Gaps = 12/378 (3%)

Query: 51  HQGKNSDNLGQVI-RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINA 108
             G+    + +V+ ++  + V    +   + +  G      G    +       GR+ N 
Sbjct: 54  EPGEPIRLMAEVMHQLGDNRVRCVAMSSTDGLVRGMEARDLGEPITVPVGEEVLGRLFNV 113

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PID    +   +  + I    P    ++   + F+TGI+VID+  P   G ++G+F 
Sbjct: 114 LGEPIDKQGPVDTEE-KLPIHRPAPSYEEQETTTEVFETGIKVIDLLAPYAKGGKVGLFG 172

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-DNLKKSVVVVATS 224
           G+G+GK+ L+     +   +     + S VGER RE  +   ++   D L K  +V    
Sbjct: 173 GAGVGKTVLIQELIHNIAIEHGGYSVFSGVGERTREGNDLWLEFQEADILDKVALVFGQM 232

Query: 225 DESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +P A GY 
Sbjct: 233 NEPPGARMRVGLTGLTMAEYFRDKEGQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQ 292

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            ++  ++ +L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +A
Sbjct: 293 PTLAVDVGQLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQIA 350

Query: 344 EEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           E+G YP VDPL S SR+ +      +  K+   +  ++ ++++ +DI  I G     D  
Sbjct: 351 EKGIYPAVDPLDSTSRILEPGVIGEEHYKVARQVQEVLQQYKDLQDIIAILGMDELSDED 410

Query: 403 LDKAVHQVPIIYDFLKQS 420
               V++   I  FL Q 
Sbjct: 411 -KIIVNRARRIERFLSQP 427


>gi|23499892|ref|NP_699332.1| flagellum-specific ATP synthase [Brucella suis 1330]
 gi|23463467|gb|AAN33337.1| flagellum-specific ATP synthase FliI [Brucella suis 1330]
          Length = 422

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 202/437 (46%), Positives = 267/437 (61%), Gaps = 33/437 (7%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQV 62
            L    +      + L   GG +S ++     V  LS+   LGD V  + G+ + +L ++
Sbjct: 9   RLAAFVRQQTIAPEPLTGIGGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEI 68

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           IR+    V + P       SLG  VF  G  RI P+  W GRVINALG  IDG  +L  G
Sbjct: 69  IRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKLG 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
              M   S  P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M  
Sbjct: 129 TRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMT 188

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           R+  FD V+++L GERGREVRE +E+ +  +L K++ VVAT DESP++R++AP TA  IA
Sbjct: 189 RAADFDTVVLALTGERGREVREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIA 248

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE- 301
           EYF   G NVLLI+DS+TRFAH+ RE+A  + E PVARGYP SVFS+LPRLLER GP   
Sbjct: 249 EYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSA 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           +  G+I  + SVLVDGD+HNDP                               ASVSRLA
Sbjct: 309 EAGGSIAGIYSVLVDGDDHNDP-------------------------------ASVSRLA 337

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              W+ +++KLV  L  ++ RFEETRD+R IG Y+ G D +LD+AV  VP IY+ L+QSP
Sbjct: 338 KHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSP 397

Query: 422 SDLSSEDVFQEITKKLQ 438
               S+D + ++   L+
Sbjct: 398 ETGLSDDPYNDLAAALR 414


>gi|114557|sp|P26530|ATPB_NICRU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11764|emb|CAA43611.1| ATPase subunit beta [Nicotiana rustica]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V QG   D++GQ I +  ++        V    
Sbjct: 21  GRVVQIIGPVLDVAFPPGKMPNIYNALVVQG--RDSVGQPINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++ G  V   G    +       GR+ N LG  +D    +     S  I    P
Sbjct: 79  MSATEGLTRGMEVIDTGAPISVPVGGATLGRIFNVLGAAVDNLGPVDTSTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 434


>gi|326403872|ref|YP_004283954.1| ATP synthase subunit beta [Acidiphilium multivorum AIU301]
 gi|325050734|dbj|BAJ81072.1| ATP synthase subunit beta [Acidiphilium multivorum AIU301]
          Length = 476

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/416 (25%), Positives = 183/416 (43%), Gaps = 21/416 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I+ I      V    +   + + +  +  +   + +V   I    V    +   + 
Sbjct: 5   VTGRITQIMGPVVDVQFEGELPYILNALETRVGDRRLVLEVAQEIGERTVRCIAMDSTDG 64

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ GD V   G    +       GR++N +G+PID    +     +  I  + P    + 
Sbjct: 65  LARGDEVRDTGEAIAVPVGPETLGRILNVIGEPIDERGPIPTT-RTAPIHRQAPSFDEQA 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 124 TSAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVG 183

Query: 197 ERGREVREFIEDYLGDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           ER RE  +   + +   +           K  +V    +E P  R    L+ +T+AEYF 
Sbjct: 184 ERTREGNDLYHEMIDAGVIKLGDNTTEGSKVALVYGQMNEPPGARMRVGLSGLTMAEYFR 243

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG
Sbjct: 244 DEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKG 301

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  S LD    LNR++AE+G YP VDPL S SR  D   
Sbjct: 302 SITSVQAIYVPADDLTDPAPATSFSHLDATTTLNRAIAEKGIYPAVDPLDSTSRALDPRI 361

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 362 VGEEHYNVAREVQRILQSYKSLQDIIAILGMDELSEDD-KLTVARARKIERFLSQP 416


>gi|254468235|ref|ZP_05081641.1| ATP synthase F1, beta subunit [beta proteobacterium KB13]
 gi|207087045|gb|EDZ64328.1| ATP synthase F1, beta subunit [beta proteobacterium KB13]
          Length = 477

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 168/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + ++ G      G   ++       GR+++ LG+PID    +   +
Sbjct: 57  LGDGIVRAIAMGSTDGLARGTQFTSTGAPIQVPVGEGTLGRIMDVLGRPIDEVGKIDTKE 116

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 117 -HRSIHQKAPEFSELSPSVELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMLELIN 175

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 176 NIAKQHSGLSVFAGVGERTREGNDFYHEMSDAGVIKLDDMKESKVAMVFGQMNEPPGNRL 235

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              L+ +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ R
Sbjct: 236 RVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGR 295

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VD
Sbjct: 296 LQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVVLSRDIASLGIYPAVD 353

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      D  ++   +   + +++E RDI  I G           AV++  
Sbjct: 354 PLDSTSRQLDPQIVGEDHYQVARRVQATLQKYKELRDIIAILGMDELS-PEDKLAVNRAR 412

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 413 KIQRFLSQP 421


>gi|13236774|gb|AAK14692.1| ATP synthase beta subunit [Drymophloeus litigiosus]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21684911|emb|CAD11582.1| ATP synthase beta subunit [Rapatea circasiana]
          Length = 492

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGDPVDNLGPVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|258512716|ref|YP_003186150.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479442|gb|ACV59761.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 467

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/414 (25%), Positives = 178/414 (42%), Gaps = 26/414 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCL----------GDFVVHQGKNSDNLGQVIRINLDIVYIC 73
           GY+  +      V      +            GD  VH           + +  ++V   
Sbjct: 4   GYVVQVMGPVVDVRFPEGQLPAINNALRIDYEGDLPVHLTLEV-----ALHLGDNVVRTI 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+ ID    +   +    I    
Sbjct: 59  AMSSTDGLVRGVEVVDTGQPISMPVGPGTLGRIFNVLGETIDERGPVDAPE-RWPIHRPA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P   +     + F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +    
Sbjct: 118 PAFGDLTTKTEIFETGIKVVDLLAPYVKGGKVGLFGGAGVGKTVLIQELIHNIAKEHGGY 177

Query: 191 -IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            + + VGER RE  +   +     +  K+ +V    +E P  R    L+ +T+AEYF   
Sbjct: 178 SVFAGVGERTREGNDLYHEMKESGVLDKTCMVFGQMNEPPGARLRVALSGLTLAEYFRDV 237

Query: 249 GDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
               +   +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI      +G+I
Sbjct: 238 EQRDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIA--STVRGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D++ DP   +  + LD   VL R +A+ G YP VDPLAS SR        
Sbjct: 296 TSIQAVYVPADDYTDPAPANTFTHLDATTVLERRIADMGLYPAVDPLASTSRALQPDIVG 355

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +  ++ R+ E +DI  I G     D      V +   I +FL Q 
Sbjct: 356 EEHYQVARGVQAVLQRYRELQDIIAILGMDELTDED-RLIVSRARKIQNFLSQP 408


>gi|229917035|ref|YP_002885681.1| F0F1 ATP synthase subunit beta [Exiguobacterium sp. AT1b]
 gi|229468464|gb|ACQ70236.1| ATP synthase F1, beta subunit [Exiguobacterium sp. AT1b]
          Length = 472

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 171/366 (46%), Gaps = 11/366 (3%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG PID    + 
Sbjct: 54  AVHLGDDTVRTIAMDSTDGVRRGMEVLDLGSPISVPVGEATLGRVFNVLGNPIDDK-EVA 112

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
              L   I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 113 ADVLRAPIHRQAPTFDELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 172

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +     + K + +V    +E P  R    L
Sbjct: 173 LINNIAQEHSGISVFAGVGERTREGNDLFHEMTDSGVIKQTAMVFGQMNEPPGARLRVAL 232

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 233 TGLTMAEYFRDEQGQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGMLQE 292

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T++ +V V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 293 RI--TSTAKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLSEMGIYPAVDPLA 350

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++  ++   + R++E +DI  I G     +      VH+   I 
Sbjct: 351 STSRALSPEIVGKEHYEVARNVQQTLQRYKELQDIIAILGMDELSEDD-KLTVHRARRIQ 409

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 410 FFLSQN 415


>gi|156530163|gb|ABU75178.1| AtpB [Picrolemma sprucei]
          Length = 496

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINMTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 ALIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|63091891|emb|CAH58797.1| ATP synthase alpha chain [Enterococcus hirae]
 gi|63091923|emb|CAH58816.1| ATP synthase alpha chain [Enterococcus hirae]
 gi|63091971|emb|CAH58843.1| ATP synthase alpha chain [Enterococcus hirae]
 gi|72534371|emb|CAH58792.1| ATP synthase alpha chain [Enterococcus sp. LMG 19843]
          Length = 367

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGEIV-TDKARPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTILNQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|62085182|gb|AAX62995.1| ATP synthase beta subunit [Podocalyx loranthoides]
          Length = 476

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ + +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTTGQQLNVTCEVQQLLGNNRVRTVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVVDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYKEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 360

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPKIVGDKHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|17366676|sp|Q9BA84|ATPB_HYOLA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236738|gb|AAK14674.1| ATP synthase beta subunit [Hyophorbe lagenicaulis]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|315649870|ref|ZP_07902952.1| ATP synthase F1, beta subunit [Paenibacillus vortex V453]
 gi|315274669|gb|EFU38051.1| ATP synthase F1, beta subunit [Paenibacillus vortex V453]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 194/413 (46%), Gaps = 22/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQY-------VCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           G + SIT     +     +       V + +  +  G++ D   +V     D  V    +
Sbjct: 4   GRVVSITGAVVDIEFERGHLPEIFNAVKI-EATLEGGRSVDLTLEVSNHLGDNLVRCIAM 62

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G      GR   +   +   GRV N LG+PID    +   +++  I  + PP
Sbjct: 63  SSTDGLIRGIEAVDLGRPITVPVGSATLGRVFNVLGEPIDNAGDVV-SEINNPIHREAPP 121

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G +IG+F G+G+GK+  +     +   +     +
Sbjct: 122 YDELSTQAEMLETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVAIQELINNIAQEHGGISV 181

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +  
Sbjct: 182 FAGVGERTREGNDLYHEMSDSGVINKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEG 241

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ SE+ RL ERI  +  +KG++T+
Sbjct: 242 KDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGRLQERI--TSTKKGSVTS 299

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAWSAD 368
           + ++ V  D++ DP   +  + LD    L R ++E G YP VDPLAS SR+   +    +
Sbjct: 300 IQAIYVPADDYTDPAPATTFAHLDATTNLERKISEMGIYPAVDPLASSSRILAPEIVGEE 359

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQS 420
              +   +  ++ R+ E +DI  I G     +   DKA+  +   +  FL Q+
Sbjct: 360 HYNVAQGVKKILARYNELQDIIAILGMDELSEE--DKAIVGRARRVQRFLSQA 410


>gi|42559044|gb|AAS20208.1| ATP synthase beta subunit [Calochortus apiculatus]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 5   GRIAQIIGPVLDVVFSPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 63  MSATDGLMRGLEVVDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|61968235|gb|AAX57044.1| ATP synthase beta subunit [Cleistanthus suarezensis]
          Length = 479

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        +    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRIRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGTPLSVPVGGSTLGRIFNVLGEPVDDLGPVD-TRATYPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|15430302|gb|AAK95909.1| ATP synthase beta subunit [Geonoma oxycarpa]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633379|gb|AAM52164.1| ATP synthase beta subunit [Stylisma patens]
          Length = 490

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   +   +V QG++++ +    +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYSALVIQGRDNEQMNVTCEVQQLLGNNRVRAVAMSAT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG P+D   ++     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGAPVDNLGAVD-TKTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESRVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|4063522|gb|AAC98319.1| ATP synthase beta subunit [Acer saccharum]
          Length = 456

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGIEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|356768|prf||1211283A ATPase beta F1
          Length = 473

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID +  + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGQVTLGRVFNVLGEPIDLEGDIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G GK+ L+  
Sbjct: 111 ADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGDGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAIGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPL 
Sbjct: 291 RI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLV 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLERYKELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|254798618|ref|YP_003058270.1| CF1 beta subunit of ATP synthase [Parachlorella kessleri]
 gi|229915566|gb|ACQ90909.1| CF1 beta subunit of ATP synthase [Parachlorella kessleri]
          Length = 482

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I       +    +   + + +V QGKN          +V ++  D  V    + 
Sbjct: 11  GRITQIIGPVLDASFPPGKMPNIYNALVVQGKNQAGQDISVTCEVQQLLGDHCVRAVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+   +       GR+ N LG+P+D    +   +  + I    P  
Sbjct: 71  ATDGLMRGMDVIDTGKPLSVPVGQATLGRIFNVLGEPVDNLGPVNNKE-ELPIHRSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 VDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +            +  K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESRVIDEDNISASKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D   +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 WIVGDTHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 424


>gi|155029365|dbj|BAF75566.1| ATP synthase beta subunit [Vernicia montana]
          Length = 489

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRVMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|42559054|gb|AAS20213.1| ATP synthase beta subunit [Prosartes trachycarpa]
          Length = 486

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 423


>gi|62085149|gb|AAX62980.1| ATP synthase beta subunit [Ixonanthes chinensis]
          Length = 484

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTVGEQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+ ID    L     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGETIDDLG-LIDTRTTSPIHRAAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|332527643|ref|ZP_08403689.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2]
 gi|332112046|gb|EGJ12022.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 169/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G +V   G    +       GR+++ LG PID    + +  
Sbjct: 45  LGDGVVRTIALGSSDGLRRGLMVTDTGAGITVPVGKATLGRIMDVLGNPIDERGPVDQT- 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 HTATIHRKAPAYDELSPSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +    N          K  +V    +E P  R 
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMSDSNVVVQENLSESKVAMVYGQMNEPPGNRL 223

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ R
Sbjct: 224 RVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGR 283

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VD
Sbjct: 284 LQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVD 341

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      +      ++   + R++E RDI  I G           AV +  
Sbjct: 342 PLDSTSRQIDPNVVGEEHYSTTRAVQATLQRYKELRDIIAILGMDELS-PEDKLAVARAR 400

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 401 KIQRFLSQP 409


>gi|228017198|gb|ACP52018.1| ATP synthase CF1 beta subunit [Pinus leiophylla var. chihuahuana]
          Length = 492

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S  +    G I+ I      V+     +  + + +  +G+ +   
Sbjct: 1   MRKNPLVLG-----VSARVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSAIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|254520882|ref|ZP_05132937.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14]
 gi|219718473|gb|EED36998.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14]
          Length = 468

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 186/414 (44%), Gaps = 20/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V    + V  + D +     N++   +V + +   +V    +G  
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRESVPKVYDALKV--DNTEITLEVQQQLGDGVVRTIALGST 58

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +    +  +  R   +   A   GR+++ LG+PID    +   D S EI    P   +
Sbjct: 59  DGLKRNLIATNTNRGISVPVGAGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRAAPSYED 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + 
Sbjct: 118 QSPATELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D   
Sbjct: 178 VGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENG 237

Query: 254 ------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
                 L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 238 KGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  + L+RS+A  G YP VDPL S SR  D     
Sbjct: 296 TSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIG 355

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +       +   + +++E +DI  I G     +    +AV +   I  F  Q 
Sbjct: 356 HEHYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQAVSRARKIERFFSQP 408


>gi|63091807|emb|CAH58754.1| ATP synthase alpha chain [Enterococcus gallinarum]
 gi|63091809|emb|CAH58755.1| ATP synthase alpha chain [Enterococcus gallinarum]
 gi|63091899|emb|CAH58801.1| ATP synthase alpha chain [Enterococcus gallinarum]
 gi|63091933|emb|CAH58824.1| ATP synthase alpha chain [Enterococcus gallinarum]
 gi|63091967|emb|CAH58841.1| ATP synthase alpha chain [Enterococcus gallinarum]
          Length = 367

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGEFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D S  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGPID-TDKSRPVEAAAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+T+      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTTIAIDTIINQKGQNMICIYVAIGQKDSTVRAQVETLRR 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPLLYIAPYAGAAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYSGVRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|8439276|emb|CAB90072.1| ATP synthase beta subunit [Euclea natalensis]
          Length = 476

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRIVQIIGPVLBVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MIATDGLTRGMEVIDTGAALSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER  E  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTXEGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TGEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|15723719|gb|AAL05075.1| ATP synthase beta subunit [Trichodiadema barbatum]
          Length = 472

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVSDTGAPLSVPVGGATLGRIFNVLGEPVDNLXPVD-TRTTSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVXERTREGNDLYMEMKESGVITEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|4063544|gb|AAC98330.1| ATP synthase beta subunit [Floerkea proserpinacoides]
          Length = 456

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVSQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-IRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|224830500|gb|ACN66345.1| ATP synthase beta chain [Chasmanthera welwitschii]
          Length = 470

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|148787949|gb|ABR12224.1| ATP synthase beta subunit [Hanguana malayana]
          Length = 429

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+PID    +    
Sbjct: 1   LGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLGPVD-TR 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|21633375|gb|AAM52162.1| ATP synthase beta subunit [Bonamia spectabilis]
          Length = 490

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   +   +V QG++++ +    +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYSALVIQGRDNEQMNVTCEVQQLLGNNRVRAVAMSAT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG P+D   ++     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGAPVDNLGAVD-TKTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESRVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|14718092|gb|AAK72786.1| ATP synthase beta subunit [Japonolirion osense]
          Length = 472

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|284928846|ref|YP_003421368.1| ATP synthase F1 subcomplex subunit beta [cyanobacterium UCYN-A]
 gi|284809305|gb|ADB95010.1| ATP synthase F1 subcomplex beta subunit [cyanobacterium UCYN-A]
          Length = 482

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 191/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G ++ I          S  +  + + +  +GKNS         +V ++  D  V    + 
Sbjct: 11  GKVTQIIGPVIDAEFPSGKLPRIYNSLTVEGKNSAGETIKITCEVQQLLGDNQVRAVSMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +G  + S  I    P  
Sbjct: 71  GTDGLIRGMSVTDSGSPISVPVGKETLGRIFNVLGEPVDQRGEVGNKEFS-PIHRPAPKL 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            + +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +         + 
Sbjct: 130 TDLETKPQVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVF 189

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   + +             K  +V    +E P  R    L+A+T+AEY
Sbjct: 190 AGVGERTREGNDLYNEMMESGVINSENLNDSKIALVYGQMNEPPGARMRVALSALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 250 FRDVNKQDVLLFVDNIFRFVQAGAEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LDG  VL+R+LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 NIVGQEHYDTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIERFLSQP 424


>gi|260574407|ref|ZP_05842411.1| ATPase, FliI/YscN family [Rhodobacter sp. SW2]
 gi|259023303|gb|EEW26595.1| ATPase, FliI/YscN family [Rhodobacter sp. SW2]
          Length = 437

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 170/433 (39%), Positives = 254/433 (58%), Gaps = 6/433 (1%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
             LA++A   + +LV   G I+ I      V  L++   LGD V+ +G  +   G+V+R+
Sbjct: 7   ALLAEIAGVQTTSLV---GRIAEIGRGTLRVAGLTEASALGDRVLIRGSGAVLGGEVLRL 63

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
             + V + P G  E +++GD V   GR  I+P   W GR+I+  GKP+DG  +L +G   
Sbjct: 64  AREGVTVLPDGSAEGLAIGDAVELVGRAEIAPDDSWIGRIIDPFGKPLDGR-ALFRGPKP 122

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +    P A  R+R+ +   T + V D   PL  GQRIG+FAGSG+GKS+LL+ FAR  
Sbjct: 123 RPLRDAAPAAATRRRLGERLSTSVAVFDTLLPLVRGQRIGLFAGSGVGKSSLLAKFARGV 182

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEY 244
             D V+I+LVGERGRE+REF +  LG     +SVVV ATSD+SP++R+    TA+ +AE+
Sbjct: 183 TADVVVIALVGERGRELREFTDRVLGPQGMARSVVVTATSDQSPLIRRRCAWTAMAVAEH 242

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
           F  +G +VL + DSITRFA + RE+   +GE    RG+P S    +  L ER GP  +  
Sbjct: 243 FRDQGLHVLFLADSITRFAEAHREVVLAAGEEGNLRGFPPSTSHTIMSLAERAGPGPEGM 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+ITAV SVLV G + ++P+AD +R +LDGH+V++R +AE GRYP +D L SVSR   +A
Sbjct: 303 GDITAVFSVLVAGSDMDEPVADILRGVLDGHVVMDRKIAERGRYPAIDLLRSVSRSLPEA 362

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
            +  E  +++    L+  ++    +   G Y  G D ++D A+   P +  FL +  +D 
Sbjct: 363 ANLAENAMIAEARRLLGAYDRAEMMIQAGLYAKGSDPMVDAAIRVWPALDAFLAEDAAD- 421

Query: 425 SSEDVFQEITKKL 437
             E  F+++   L
Sbjct: 422 GVEGSFRKLAACL 434


>gi|218282096|ref|ZP_03488395.1| hypothetical protein EUBIFOR_00970 [Eubacterium biforme DSM 3989]
 gi|218216889|gb|EEC90427.1| hypothetical protein EUBIFOR_00970 [Eubacterium biforme DSM 3989]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 114/383 (29%), Positives = 189/383 (49%), Gaps = 18/383 (4%)

Query: 49  VVHQGKNSDNLGQVIRINLDI----VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCG 103
           +  +  N +NL  ++ +  DI    V    +G  + +  G      G+  +        G
Sbjct: 32  IEIERPNEENL--IVEVEQDIGSDRVRCIAMGSTDGLVRGMDAIDTGKPIQAPVGENVLG 89

Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163
           R+ N LGKPIDG   +     +M I  K P    +    +  +TGI+VID+  P   G +
Sbjct: 90  RMFNVLGKPIDGLGDVDAN--TMPIHRKAPAFDEQSTTSEPLETGIKVIDLLCPYAKGGK 147

Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL-KKSVV 219
           IG+F G+G+GK+ L+     +   +    S+V    ER RE  +   +     +  K+V+
Sbjct: 148 IGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVVGVGERTREGNDMYHEMKDSGVLDKTVL 207

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +ESP  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +P 
Sbjct: 208 VYGQMNESPGARMRVGLTGLTMAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGRVPS 267

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+ +L ERI  +  + G+IT+V ++ V  D+  DP   +  S LD   VL
Sbjct: 268 AVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPATTFSHLDAKTVL 325

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R +A  G YP VDPL S SR+ D     +   K+   + +++ R+++ +DI  I G   
Sbjct: 326 DRDIAALGIYPAVDPLESSSRILDPLVVGEKHYKVARGVQNILQRYKDLQDIIAILGMDE 385

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +    K V++   + +FL Q 
Sbjct: 386 LSEED-KKVVNRARRVRNFLSQP 407


>gi|156622737|dbj|BAF76349.1| ATP synthase beta subunit [Gomortega keule]
          Length = 488

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|42559036|gb|AAS20204.1| ATP synthase beta subunit [Doryanthes palmeri]
          Length = 477

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|75326833|sp|Q7HHX1|ATPB_BALSE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236744|gb|AAK14677.1| ATP synthase beta subunit [Dictyocaryum lamarckianum]
 gi|13236748|gb|AAK14679.1| ATP synthase beta subunit [Wettinia hirsuta]
 gi|13236754|gb|AAK14682.1| ATP synthase beta subunit [Leopoldinia pulchra]
 gi|13236772|gb|AAK14691.1| ATP synthase beta subunit [Balaka seemannii]
 gi|13236784|gb|AAK14697.1| ATP synthase beta subunit [Bentinckia nicobarica]
 gi|15430300|gb|AAK95908.1| ATP synthase beta subunit [Calyptronoma occidentalis]
 gi|15430310|gb|AAK95913.1| ATP synthase beta subunit [Bactris humilis]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|15642757|ref|NP_232390.1| F0F1 ATP synthase subunit beta [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121591160|ref|ZP_01678465.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80]
 gi|121729382|ref|ZP_01682049.1| ATP synthase F1, beta subunit [Vibrio cholerae V52]
 gi|147674488|ref|YP_001218421.1| F0F1 ATP synthase subunit beta [Vibrio cholerae O395]
 gi|153212975|ref|ZP_01948569.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587]
 gi|153803370|ref|ZP_01957956.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3]
 gi|153823452|ref|ZP_01976119.1| ATP synthase F1, beta subunit [Vibrio cholerae B33]
 gi|153827188|ref|ZP_01979855.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2]
 gi|153829668|ref|ZP_01982335.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39]
 gi|227082876|ref|YP_002811427.1| ATP synthase F1, beta subunit [Vibrio cholerae M66-2]
 gi|229508277|ref|ZP_04397781.1| ATP synthase beta chain [Vibrio cholerae BX 330286]
 gi|229508629|ref|ZP_04398124.1| ATP synthase beta chain [Vibrio cholerae B33]
 gi|229515969|ref|ZP_04405426.1| ATP synthase beta chain [Vibrio cholerae TMA 21]
 gi|229517155|ref|ZP_04406601.1| ATP synthase beta chain [Vibrio cholerae RC9]
 gi|229520153|ref|ZP_04409580.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80]
 gi|229524893|ref|ZP_04414298.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426]
 gi|229606551|ref|YP_002877199.1| F0F1 ATP synthase subunit beta [Vibrio cholerae MJ-1236]
 gi|254226932|ref|ZP_04920498.1| ATP synthase F1, beta subunit [Vibrio cholerae V51]
 gi|254291148|ref|ZP_04961945.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226]
 gi|254851555|ref|ZP_05240905.1| ATP synthase subunit beta [Vibrio cholerae MO10]
 gi|255746826|ref|ZP_05420772.1| ATP synthase beta chain [Vibrio cholera CIRS 101]
 gi|262155906|ref|ZP_06029028.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1]
 gi|262167080|ref|ZP_06034795.1| ATP synthase beta chain [Vibrio cholerae RC27]
 gi|14547933|sp|Q9KNH5|ATPB_VIBCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|172047489|sp|A5F459|ATPB_VIBC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808173|sp|C3LSI9|ATPB_VIBCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|9657365|gb|AAF95903.1| ATP synthase F1, beta subunit [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546977|gb|EAX57122.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80]
 gi|121628663|gb|EAX61135.1| ATP synthase F1, beta subunit [Vibrio cholerae V52]
 gi|124116201|gb|EAY35021.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587]
 gi|124121094|gb|EAY39837.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3]
 gi|125620537|gb|EAZ48905.1| ATP synthase F1, beta subunit [Vibrio cholerae V51]
 gi|126519021|gb|EAZ76244.1| ATP synthase F1, beta subunit [Vibrio cholerae B33]
 gi|146316371|gb|ABQ20910.1| ATP synthase F1, beta subunit [Vibrio cholerae O395]
 gi|148874844|gb|EDL72979.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39]
 gi|149738911|gb|EDM53235.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2]
 gi|150422993|gb|EDN14943.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226]
 gi|227010764|gb|ACP06976.1| ATP synthase F1, beta subunit [Vibrio cholerae M66-2]
 gi|227012008|gb|ACP08218.1| ATP synthase F1, beta subunit [Vibrio cholerae O395]
 gi|229338474|gb|EEO03491.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426]
 gi|229342747|gb|EEO07738.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80]
 gi|229346218|gb|EEO11190.1| ATP synthase beta chain [Vibrio cholerae RC9]
 gi|229347069|gb|EEO12031.1| ATP synthase beta chain [Vibrio cholerae TMA 21]
 gi|229354343|gb|EEO19271.1| ATP synthase beta chain [Vibrio cholerae B33]
 gi|229354550|gb|EEO19472.1| ATP synthase beta chain [Vibrio cholerae BX 330286]
 gi|229369206|gb|ACQ59629.1| ATP synthase beta chain [Vibrio cholerae MJ-1236]
 gi|254847260|gb|EET25674.1| ATP synthase subunit beta [Vibrio cholerae MO10]
 gi|255735583|gb|EET90982.1| ATP synthase beta chain [Vibrio cholera CIRS 101]
 gi|262024466|gb|EEY43152.1| ATP synthase beta chain [Vibrio cholerae RC27]
 gi|262030358|gb|EEY49000.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1]
 gi|327485232|gb|AEA79639.1| ATP synthase beta chain [Vibrio cholerae LMA3894-4]
          Length = 467

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 181/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V   K    L    ++   ++    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I    P    
Sbjct: 61  DGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEV-YSIHRPAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +     +         K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDVARGVQATLQRYKELKDIIAILGMDELSEAD-KQVVARARKIERFLTQP 411


>gi|241912854|gb|ACS72105.1| AtpB [Gomphichis traceyae]
          Length = 489

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQKINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P     +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|224830492|gb|ACN66341.1| ATP synthase beta chain [Burasaia apetala]
          Length = 489

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHXSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|164657588|ref|XP_001729920.1| hypothetical protein MGL_2906 [Malassezia globosa CBS 7966]
 gi|159103814|gb|EDP42706.1| hypothetical protein MGL_2906 [Malassezia globosa CBS 7966]
          Length = 439

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/385 (28%), Positives = 177/385 (45%), Gaps = 19/385 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G    I       GR++N +G+PID    + K D
Sbjct: 15  LGENTVRCIAMDGTEGLVRGQKVLDTGAPITIPVGDGTLGRILNVIGEPIDERGPV-KTD 73

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 74  SYRPIHRDPPAFVEQSTDAEILETGIKVVDLIAPYARGGKIGLFGGAGVGKTVLIQELIN 133

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   + +       +   K  +V    +E P  R   
Sbjct: 134 NIAKAHGGFSVFTGVGERTREGNDLYHEMIETGVINLEGDSKVSLVFGQMNEPPGARARV 193

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF  +   +VLL +D+I RF  +  E +   G +P A GY  ++ +++  +
Sbjct: 194 ALTGLTVAEYFRDEQGQDVLLFIDNIFRFTQAGSETSALLGRIPSAVGYQPTLSTDMGSM 253

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+RS+AE G YP VDP
Sbjct: 254 QERI--TTTRKGSITSVQAVYVPADDVTDPAPATTFAHLDATTVLDRSIAELGIYPAVDP 311

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +   + S +  L+  ++  +DI  I G     +      V +   
Sbjct: 312 LNSQSRMLDPDVVGQEHYDVASGVQKLLQDYKSLQDIIAILGMDELSEED-KLTVERARK 370

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  F+ Q     +   VF  I  +L
Sbjct: 371 MQRFMSQP---FAVAQVFTGIEGRL 392


>gi|33318665|gb|AAQ05216.1| ATP synthase beta subunit [Encephalartos barteri]
          Length = 475

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGQDMAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-ARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL------- 214
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +     +       
Sbjct: 150 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDIS 209

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 210 GSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|17224765|gb|AAL37104.1| ATP synthase beta subunit [Burmannia coelestis]
          Length = 480

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D LGQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVVFPPGRMPNIYNALVV--KSRDTLGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|6467946|gb|AAF13245.1|AF197612_1 ATPase beta subunit [Podophyllum peltatum]
          Length = 485

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+  D LGQ I +  ++        +    
Sbjct: 16  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRIRAVA 73

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 74  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 132

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 133 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 192

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 193 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 252

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 253 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 310

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 311 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 370

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|167522261|ref|XP_001745468.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775817|gb|EDQ89439.1| predicted protein [Monosiga brevicollis MX1]
          Length = 495

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/421 (26%), Positives = 191/421 (45%), Gaps = 18/421 (4%)

Query: 20  VVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
            V  G I S+      V     +   + + +   G+    + +V   +  + V    +  
Sbjct: 26  AVANGKIVSVIGAVVDVKFDDGRLPPILNGLEVAGREQRLVLEVAQHLGENTVRTIAMDG 85

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   ++       GR++N +G+PID    + K D    I ++ P   
Sbjct: 86  TEGLVRGQPVVDTGDAIKVPVGEATLGRIMNVIGEPIDERGPI-KADKYAPIHAEAPELE 144

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           + +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 145 DMKTEAEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHSGFSVFA 204

Query: 194 LVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VGER RE  +   + +       +   K  +V    +E P  R    LT +T+AE F  
Sbjct: 205 GVGERTREGNDLYHEMIEGGVIQLEGDSKVALVYGQMNEPPGARARVALTGLTVAESFRD 264

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+I
Sbjct: 265 QGRDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTVGSI 322

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWS 366
           T+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     
Sbjct: 323 TSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDVSVVG 382

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               K    +  ++  ++  +DI  I G     +      V +   I  FL Q P ++++
Sbjct: 383 ERHYKTARDVQKILQDYKSLQDIIAILGMDELSEDD-KMTVARARKIQRFLSQ-PFEVAA 440

Query: 427 E 427
            
Sbjct: 441 P 441


>gi|110915610|gb|ABH02593.1| ATP synthase beta subunit [Catabrosa aquatica]
          Length = 458

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 34  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 93

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 94  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 152

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 153 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 273 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 331 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 391 D-RLTVARARKIERFLSQP 408


>gi|146318826|ref|YP_001198538.1| F0F1 ATP synthase subunit beta [Streptococcus suis 05ZYH33]
 gi|146321035|ref|YP_001200746.1| F0F1 ATP synthase subunit beta [Streptococcus suis 98HAH33]
 gi|145689632|gb|ABP90138.1| F0F1-type ATP synthase, beta subunit [Streptococcus suis 05ZYH33]
 gi|145691841|gb|ABP92346.1| F0F1-type ATP synthase, beta subunit [Streptococcus suis 98HAH33]
 gi|292558487|gb|ADE31488.1| ATP synthase F1, beta subunit [Streptococcus suis GZ1]
          Length = 481

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/427 (27%), Positives = 198/427 (46%), Gaps = 18/427 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSD---NLG 60
           + Q   + ++   +  G I+ +      V   ++   L +     VV++  +S     L 
Sbjct: 1   MPQPLSNRNRGNRMSSGKITQVVGPVVDVAFAAED-KLPEINNALVVYKNDDSKQKVVLE 59

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID ++S 
Sbjct: 60  VALELGDGVVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEESF 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                   I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+ 
Sbjct: 120 PADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQ 179

Query: 180 MFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
               +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    
Sbjct: 180 ELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVA 239

Query: 236 LTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L 
Sbjct: 240 LTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQ 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPL
Sbjct: 300 ERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQLGIYPAVDPL 357

Query: 355 ASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           AS SR LA +    +   +   +  ++ R++E +DI  I G     D      V +   I
Sbjct: 358 ASSSRALAPQIVGEEHYAVAMEVKRVLQRYQELQDIIAILGMDELSDEE-KTLVGRARRI 416

Query: 414 YDFLKQS 420
             FL Q+
Sbjct: 417 QFFLSQN 423


>gi|20467355|gb|AAL27808.1| ATPase beta subunit [Zamia pumila]
          Length = 445

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGQDTAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-ARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
            +F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 XLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDIS 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 RSKVALVYGQMNEPPXARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|7706852|emb|CAB90066.1| ATP synthase beta subunit [Apium graveolens]
          Length = 491

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 48  KGRDTAGQQINVXCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 107

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D   S+     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 108 IFNVLGEPVDNLGSVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 166

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 167 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 226

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+ EYF      +V L +D+I RF  +  E++  
Sbjct: 227 ESKVALVYGQMNEPPGARMRVGLTALTMXEYFRDVNEQDVXLFIDNIFRFVQAGXEVSAL 286

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 287 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPXTTFAHL 344

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        D  +    +   + R++E +DI  
Sbjct: 345 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYKELQDIIA 404

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 405 ILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|5001591|gb|AAD37042.1|AF092116_1 ATP synthase beta subunit [Circaeaster agrestis]
          Length = 486

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   DN+GQ + +  ++        V    
Sbjct: 9   GRIVQIIGPVLDVAFSPGKMPNIYNALIVKG--RDNVGQQVNMTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPXSVPVGGATLGRIXNVLGEPVDNLGPVXTXTTS-PIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  K   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYKTAQNVKQTLQRYKELQDIIAILGLDELSEED-RLTVARAXKIERFLSQP 422


>gi|4206564|gb|AAD11713.1| ATP synthase beta subunit [Cneorum pulverulentum]
          Length = 475

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KSRDTVGQPINVACEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 99  IFNVLGEPVDNLGPID-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 157

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 158 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 218 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTXAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        D  +    +   + R++E +DI  
Sbjct: 336 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYKELQDIIA 395

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 396 ILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|158602279|gb|ABW74606.1| ATP synthase beta subunit [Laccopetalum giganteum]
          Length = 494

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTQLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIXRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|218290061|ref|ZP_03494228.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239895|gb|EED07083.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 467

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/414 (25%), Positives = 177/414 (42%), Gaps = 26/414 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCL----------GDFVVHQGKNSDNLGQVIRINLDIVYIC 73
           GY+  +      V      +            GD  VH           + +  ++V   
Sbjct: 4   GYVVQVMGPVVDVRFPEGQLPAINNALRIDYEGDLPVHLTLEV-----ALHLGDNVVRTI 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+ ID    +        I    
Sbjct: 59  AMSSTDGLVRGVEVVDTGQPISMPVGPGTLGRIFNVLGETIDEKGPVQAA-QRWPIHRPA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P   +     + F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +    
Sbjct: 118 PAFGDLTTKTEIFETGIKVVDLLAPYVKGGKVGLFGGAGVGKTVLIQELIHNIAKEHGGY 177

Query: 191 -IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            + + VGER RE  +   +     +  K+ +V    +E P  R    L+ +T+AEYF   
Sbjct: 178 SVFAGVGERTREGNDLYHEMKESGVLDKTCMVFGQMNEPPGARLRVALSGLTLAEYFRDV 237

Query: 249 GDNVL-LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
               +   +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI      +G+I
Sbjct: 238 EQRDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIA--STVRGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D++ DP   +  + LD   VL R +A+ G YP VDPLAS SR        
Sbjct: 296 TSIQAVYVPADDYTDPAPANTFTHLDATTVLERRIADMGLYPAVDPLASTSRALQPDIVG 355

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +  ++ R+ E +DI  I G     D      V +   I +FL Q 
Sbjct: 356 EEHYQVARGVQAVLQRYRELQDIIAILGMDELTDED-RLIVSRARKIQNFLSQP 408


>gi|34500022|gb|AAQ73593.1| ATP synthase beta subunit [Lonepinella koalarum]
          Length = 426

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/362 (29%), Positives = 177/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR++N LG+PID    +G  +
Sbjct: 38  LGGGVVRFIALGSSDGLKRGLKVENTGHPISVPVGVKTLGRIMNVLGEPIDEKGEIGAEE 97

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  + P   ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 98  -NWAIHRQAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 156

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 157 NIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGL 216

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 217 TMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 274

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR
Sbjct: 275 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSR 334

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     +E   +   +  ++ R++E +DI  I G     +      V +   I  FL 
Sbjct: 335 QLDPLVVGEEHYNVARGVQGILQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLS 393

Query: 419 QS 420
           Q 
Sbjct: 394 QP 395


>gi|7708177|emb|CAB90029.1| ATP synthase beta subunit [Brexia madagascariensis]
          Length = 478

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 24/418 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G ++  I  V        +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRFVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTSGQPINVICEVQQLLGNNQVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|17224780|gb|AAL37111.1| ATP synthase beta subunit [Stemona tuberosa]
          Length = 478

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 33  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 92

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 93  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 151

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 152 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 211

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 212 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 271

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 272 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 329

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 330 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 389

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 390 ILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|4206584|gb|AAD11723.1| ATP synthase beta subunit [Chorilaena quercifolia]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D  GQ I +  ++        V   
Sbjct: 1   GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTAGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|71897237|ref|NP_001026562.1| ATP synthase subunit beta, mitochondrial precursor [Gallus gallus]
 gi|82082513|sp|Q5ZLC5|ATPB_CHICK RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|53130278|emb|CAG31468.1| hypothetical protein RCJMB04_6l18 [Gallus gallus]
          Length = 533

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 187/412 (45%), Gaps = 18/412 (4%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
            G I ++      V        + + +  QG+ +  + +V   +  + V    +   E +
Sbjct: 65  TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGL 124

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   RI       GR++N +G+PID    +     +  I ++ P  +    
Sbjct: 125 VRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSV 183

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
            +K   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 184 EQKILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGE 243

Query: 198 RGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           R RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +  
Sbjct: 244 RTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG 303

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+
Sbjct: 304 QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITS 361

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +
Sbjct: 362 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGPE 421

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 422 HYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 472


>gi|61968233|gb|AAX57043.1| ATP synthase beta subunit [Cleistanthus perrieri]
          Length = 479

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        +    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRIRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGTPLSVPVGGSTLGRIFNVLGEPVDDLGPVD-TRATYPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|307546952|ref|YP_003899431.1| flagellar protein export ATPase FliI [Halomonas elongata DSM 2581]
 gi|307218976|emb|CBV44246.1| flagellar protein export ATPase FliI [Halomonas elongata DSM 2581]
          Length = 464

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 150/426 (35%), Positives = 225/426 (52%), Gaps = 17/426 (3%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLG-----DFVVHQGKNSDNLGQ--VIRINLDIV 70
                 G +   T +   V  L   V LG     +     G+ +    +  V+    D +
Sbjct: 29  PTSRASGRVVRATGMVIEVVGL--RVALGNAFRIELPDVPGQPATRYAEAEVVGFAGDRL 86

Query: 71  YICPVGIGEEISLGDLVFHWGRF------RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
           ++ P+     +  G  V            R        GRV++  G P+D    L +   
Sbjct: 87  FLMPLAGISGLMPGARVHPLAENSTDAARRFPLGDSLLGRVVDGNGDPLDDLGPLEEAP- 145

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              +       + R  ++     GIR I+    +  GQR+G+FAGSG+GKS LL M AR 
Sbjct: 146 RAPLAQPPFNPLARAPIDTQIDVGIRAINALLSVGRGQRMGLFAGSGVGKSVLLGMMARY 205

Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D +++ L+GERGREV++FI++ LG    +++VVV A +D SP+ R      A  IAE
Sbjct: 206 TRADVIVVGLIGERGREVQDFIDNILGAHGRERAVVVAAPADTSPLQRLQGASYATRIAE 265

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G +E+ 
Sbjct: 266 GFRDQGHDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPNLVERAGNAERG 325

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R+LAE G YP +D  AS+SR  + 
Sbjct: 326 GGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRTLAEAGHYPAIDIEASISRAMNA 385

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
                +++       L  R++  RD+  +G Y PG D  LD+AV + P +  FL+Q   +
Sbjct: 386 VIDDTQRRQAQRFKGLFSRYQRNRDLISVGAYHPGNDERLDEAVRRYPDLEAFLQQDIDE 445

Query: 424 LSSEDV 429
            +  + 
Sbjct: 446 CADIEA 451


>gi|291615436|ref|YP_003525593.1| ATP synthase F1, subunit beta [Sideroxydans lithotrophicus ES-1]
 gi|291585548|gb|ADE13206.1| ATP synthase F1, beta subunit [Sideroxydans lithotrophicus ES-1]
          Length = 473

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 168/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V   G   ++       GR+++ LG+PID    + K D
Sbjct: 52  LGDGVVRTIAMGSSDGLRRGMAVNATGNPIQVPVGTGTLGRIMDVLGRPIDEVGPI-KSD 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 EKRSIHQAAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMSDAGVIDKEDFTKSKVAMVFGQMNEPPGNRL 230

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              L+ +T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ R
Sbjct: 231 RVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGR 290

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +    LD  +VL+R +A  G YP VD
Sbjct: 291 LQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIASLGIYPAVD 348

Query: 353 PLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D     +E   +  S+   + R++E RDI  I G    +      AV +  
Sbjct: 349 PLDSTSRQLDPLVVGEEHYSVARSVQQTLQRYKELRDIIAILGMDE-LAPEDKLAVARAR 407

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 408 KIQRFLSQP 416


>gi|238757861|ref|ZP_04619043.1| secretion system apparatus ATP synthase ssaN [Yersinia aldovae ATCC
           35236]
 gi|238703846|gb|EEP96381.1| secretion system apparatus ATP synthase ssaN [Yersinia aldovae ATCC
           35236]
          Length = 409

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 152/412 (36%), Positives = 224/412 (54%), Gaps = 13/412 (3%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           I +   T       V +G+      +    L +V+ I+     + P      +  G  + 
Sbjct: 4   IGATLLTAYL--PGVFMGEVCCLLPQG--ALAEVVGIDGTHALLSPFISTAGLYCGQQIQ 59

Query: 89  HW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
               R R+       GRVI+ +G+ +D    L       +  +  P  + RQ +E+   T
Sbjct: 60  PLARRHRVPVGQDLLGRVIDGMGQALDRGPELQGP--WRDYDAPPPSPLTRQLIERPMLT 117

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI- 206
           GIR ID       GQRIG+FA +G+GKSTLLSM  RS   +  ++ L+GERGREVREFI 
Sbjct: 118 GIRAIDSLLTCGEGQRIGIFAAAGVGKSTLLSMLCRSPDSEINVLVLIGERGREVREFIE 177

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
           +    +  ++ V+VV+T+D   + R  A   A TIAE F  +G  VLL  DS+TR+A + 
Sbjct: 178 QTLGEEVRRRCVIVVSTADRPALERMRALFVATTIAEAFRDQGKRVLLFADSLTRYARAA 237

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REIA  SGE+ V   YP  VF+ LPRLLER G  E  +G+ITA  +VLV+GD+ N+P+AD
Sbjct: 238 REIALASGEVAVPGSYPPCVFAALPRLLERAGKGE--RGSITAFYTVLVEGDDMNEPLAD 295

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            VRS+LDGHIVL+R LAE   +P +D LAS+SR+     SA+ +   ++L   +  + + 
Sbjct: 296 EVRSLLDGHIVLSRRLAESAHFPAIDVLASLSRIMPMVTSAEHRAQANALRSQLSVYRDV 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             +  +G ++ G D   D AV   P I  FL+Q  ++  + D   E+  +L+
Sbjct: 356 ELLVRVGEFKRGEDSQADHAVDSYPAICHFLQQQGNEPCNID---ELLPQLR 404


>gi|254427887|ref|ZP_05041594.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881]
 gi|196194056|gb|EDX89015.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881]
          Length = 460

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V    + V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRETVPKVYDALSVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   ++       GR+++ LG+PID    +G+ D  M I    P   ++
Sbjct: 60  GLKRGLGVTDNGEPIQVPVGTKTLGRIMDVLGRPIDEAGPIGE-DERMPIHRAAPTYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AATNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  + L+R +A +G YP +DPL S SR  D      +   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDSTVSLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ RF+E +DI  I G     +      V +   I  +L Q 
Sbjct: 357 RGVQTVLQRFKELKDIIAILGMDELSEDD-KLTVSRARKIERYLSQP 402


>gi|110915642|gb|ABH02609.1| ATP synthase beta subunit [Gastridium ventricosum]
          Length = 490

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +         +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIXETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|300313646|ref|YP_003777738.1| F0F1-type ATP synthase subunit beta [Herbaspirillum seropedicae
           SmR1]
 gi|124483594|emb|CAM32670.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
           seropedicae]
 gi|300076431|gb|ADJ65830.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum
           seropedicae SmR1]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 18/381 (4%)

Query: 54  KNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111
           + SD   +V + +   +V    +G  + +  G  + + G+   +       GR+++ LG 
Sbjct: 33  EGSDLTLEVQQQLGDGVVRTIALGSSDGLRRGLTISNTGKPITVPVGTATLGRIMDVLGN 92

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           PID    +   + +  I  K P        ++  +TGI+VID+  P   G ++G+F G+G
Sbjct: 93  PIDECGPVS-HEQTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAG 151

Query: 172 IGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVV 220
           +GK+  +     +         + + VGER RE  +F  +               K  +V
Sbjct: 152 VGKTVNMMELINNIAKAHSGLSVFAGVGERTREGNDFYHEMAEAKVVDLENPTNSKVAMV 211

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +TIAE F  +G +VL  +D+I R+  +  E++   G +P A 
Sbjct: 212 YGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAV 271

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+ RL ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R
Sbjct: 272 GYQPTLAEEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSR 329

Query: 341 SLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +  +   ++   + R++E RDI  I G    +
Sbjct: 330 DIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGTLQRYKELRDIIAILGMDE-L 388

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
                  V +   +  FL Q 
Sbjct: 389 APEDKLIVARARKMQRFLSQP 409


>gi|111283730|gb|ABH09215.1| ATPase beta subunit [Leiomitra lanata]
          Length = 471

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 179/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V +G+N+   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVAFSPGKMPNIYNSLVVRGQNAA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMRGMEVMDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPIDTS-TTFPIHRAAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +        + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGAKQTLQRYKELQDIIAILGLDELSEED-RLTVARAREIERFLSQP 412


>gi|34500010|gb|AAQ73587.1| ATP synthase beta subunit [Haemophilus parasuis]
          Length = 444

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 186/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVETGLTLEVQQQLG--GGVVRCIALGTSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V +  +   +       GR++N LG+PID    +G+ +    I    P   ++
Sbjct: 59  GLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEDQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 ANSTELLETGIKVIDLIAPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V S L
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVPSGL 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
              D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   + 
Sbjct: 296 RSADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAIDPLNSTSRQLDPLVVVQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQKTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLSQP 401


>gi|21633341|gb|AAM52145.1| ATP synthase beta subunit [Aniseia argentina]
          Length = 490

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V   S  +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPSGKMPYIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TNTTSPIHISAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+G + L+     +       +S+ G 
Sbjct: 140 LDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGNTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +                  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENMAQSTVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|50604360|gb|AAT79522.1| ATP synthase [Nothofagus menziesii]
          Length = 451

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 13  KGRDTVGQQIDVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 72

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 73  IFNVLGEPVDNLGPVDAS-TRSSIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 131

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 132 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQNIA 191

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 192 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 251

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 252 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 309

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 310 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 369

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 370 ILGLDELSEED-RLTVARARKIERFLSQP 397


>gi|3850952|gb|AAC72168.1| ATP synthase beta subunit [Roupala macrophylla]
          Length = 490

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D          S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGXXXXXXXS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G  P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKGGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|8388947|gb|AAF74823.1|AF156882_1 ATP synthase beta subunit [Eriostemon brevifolius]
          Length = 471

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D  GQ I +  ++        V   
Sbjct: 1   GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTAGQPINVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|153949483|ref|YP_001401262.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP
           31758]
 gi|152960978|gb|ABS48439.1| flagellar protein export ATPase FliI [Yersinia pseudotuberculosis
           IP 31758]
          Length = 472

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 160/468 (34%), Positives = 242/468 (51%), Gaps = 34/468 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 5   LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 62

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF------------------ 93
            +   +V+  N   +++ P+   E I  G  V+      G                    
Sbjct: 63  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSF 122

Query: 94  ---RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
              ++       GRV++   KP+DG  +  +      +++     + R  + +    G+R
Sbjct: 123 ASKQLPLGPELLGRVLDGSAKPLDGLPA-PETGYRAPLITPPINPLQRTAIVQVLDVGVR 181

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ L
Sbjct: 182 TINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENIL 241

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G +   +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REI
Sbjct: 242 GAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREI 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R
Sbjct: 302 ALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSAR 361

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGH+VL+R LAE G YP +D  AS+SR        D    V     L+  ++  RD+
Sbjct: 362 AILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDL 421

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +G Y  G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 422 VSVGAYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSFDDACQHLKSL 469


>gi|323388132|gb|ADX60328.1| type III secretion cytoplasmic ATPase RscN [Pseudomonas
           fluorescens]
          Length = 452

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 153/435 (35%), Positives = 233/435 (53%), Gaps = 13/435 (2%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSD 57
           +Q  LE   Q       S   V   G I  +  +     C      +GD   V +     
Sbjct: 5   LQARLEAWEQRQSSALVSFAPVSVRGRIQRVNGMLLQ--CRLPQARIGDLCQVEKSIGEY 62

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI--D 114
            L ++I  +     +  +G  E + +G  V   G   R+       G+V++  G+PI  D
Sbjct: 63  MLAEIIGFDQQDAVLSALGNLEGVRVGASVQRLGVPHRVRVGDDLLGQVLDGFGRPIAGD 122

Query: 115 GDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           G  +  + D++    ++ + P    R R+ +   TG+R ID    L  GQR+G+FAG+G 
Sbjct: 123 GPSAFVEADIAEASTVLCEAPLPTERPRISRALSTGVRSIDGLITLGEGQRVGLFAGAGC 182

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILR 231
           GK+TLL+  AR+   D ++  L+GERGRE+REF+  +       K+V+V ATSD S + R
Sbjct: 183 GKTTLLAEIARNVECDVIVFGLIGERGRELREFLDHELDDQLRAKAVLVCATSDRSSMER 242

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A  TA  +AE F  KG  VLL++DS+TRFA + REI   +GE     G P SV+S +P
Sbjct: 243 ARAAFTATALAEGFRRKGQRVLLLIDSLTRFARAQREIGLAAGEPLGRGGLPPSVYSLMP 302

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           RL+ER G +    G ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP V
Sbjct: 303 RLVERAGLTRD--GVITAIYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAV 360

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D L S+SR+     + +  +  ++L  L+  +++   +  +G Y+PG D + D AV    
Sbjct: 361 DVLGSLSRILSNVATPEHIRAGTALRRLLSAYQQIELMLKLGEYQPGSDALTDLAVDSRQ 420

Query: 412 IIYDFLKQSPSDLSS 426
            +  FL+Q   + ++
Sbjct: 421 AVDGFLRQDLREPAA 435


>gi|156598147|gb|ABU85338.1| ATP synthase CF1 beta subunit [Elaeis oleifera]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|156530099|gb|ABU75146.1| AtpB [Ailanthus fordii]
          Length = 440

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 169/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 2   NVTCEVQQLLGNNRVRAVAMSATDGLMRGTEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 62  NLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 120

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 121 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQ 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 181 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 240

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 241 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 298

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 299 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 358

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 359 D-RLTVARARKIERFLSQP 376


>gi|15430298|gb|AAK95907.1| ATP synthase beta subunit [Aphandra natalia]
          Length = 495

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|224830592|gb|ACN66391.1| ATP synthase beta chain [Tinospora esiangkara]
          Length = 489

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 73  MSATDGLMRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|225569928|ref|ZP_03778953.1| hypothetical protein CLOHYLEM_06023 [Clostridium hylemonae DSM
           15053]
 gi|225161398|gb|EEG74017.1| hypothetical protein CLOHYLEM_06023 [Clostridium hylemonae DSM
           15053]
          Length = 504

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 175/423 (41%), Gaps = 15/423 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  E+Y       + G++ S+     TV  +  +   G+ +  +       G V 
Sbjct: 13  ISILREEIENYDMVCRDRETGFVVSVGDGIATVYGI-DHAMYGEIITLETG---LKGMVQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + +     G   +I  G      G R  +     + GR+++ALG PIDG   + + 
Sbjct: 69  DIRQNEISCILFGDDSDIKEGTKAARTGKRAGVPVGEKYIGRIVDALGAPIDGLGGI-EA 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    +  + P  + R+ V    +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 128 DDYRPVEQEAPGIVERRSVSVPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSIAVDTI 187

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +           + V  +T+ E   L+ + P +A 
Sbjct: 188 LNQKGKDVICIYVAIGQKASTVAQLVNTLRSYGALDYTTVFCSTASECAPLQYIVPYSAT 247

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  +G +VL++ D +++ A + R I+   G  P    YP  VF    RLLER   
Sbjct: 248 ALAEYFMYQGKDVLIVYDDLSKHAVAYRAISLLLGRSPGREAYPGDVFYLHSRLLERSSR 307

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +E   G+ITA+  +     N +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 308 LSEEAGGGSITALPVIETQAGNVSAYIPTNVISITDGQIFLESDLFNAGMRPAVNVGLSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   S+   + +    R++     +   +D      +     + + L
Sbjct: 368 SRVGGAAQTKAMKKASGSVRIDLAQ---AREMESFTQFSSDLDDATKMQLKYGACLTELL 424

Query: 418 KQS 420
           KQ 
Sbjct: 425 KQP 427


>gi|254509593|ref|ZP_05121660.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium KLH11]
 gi|221533304|gb|EEE36292.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium KLH11]
          Length = 474

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 187/418 (44%), Gaps = 20/418 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V    Q   + + +  +      + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVHFEDQLPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G PID    +   +    I    P    +   
Sbjct: 66  RGAEVTDMGAPISVPVGNATLGRILNVVGDPIDEKGPVEASEARA-IHQPAPTFDEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKSGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SRL D A    +
Sbjct: 303 VQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSSSRLLDPAIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
              + + +  ++ R++  +DI  I G     +      V +   I  FL Q P D++ 
Sbjct: 363 HYAVATDVQQILQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQ-PFDVAE 418


>gi|241729762|ref|XP_002413810.1| F0F1-type ATP synthase, beta subunit, putative [Ixodes scapularis]
 gi|215507626|gb|EEC17118.1| F0F1-type ATP synthase, beta subunit, putative [Ixodes scapularis]
          Length = 563

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/414 (25%), Positives = 185/414 (44%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G I ++      V        + + +  +G+    + +V   +  ++V    +   E
Sbjct: 93  VGNGQIVAVIGAVVDVQFEDNLPSILNALEVEGRKPRLVLEVAQHLGENVVRTIAMDGTE 152

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR++N +G+PID    +   D  + I    P  +  
Sbjct: 153 GLVRGQKVTDTQSPIMVPVGPETLGRIMNVIGEPIDERGPI-PSDKFLSIHQDAPEFVEM 211

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 212 SVEQEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 271

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +++AEYF  +
Sbjct: 272 GERTREGNDLYHEMIEGGVISLKDKTSKVSLVYGQMNEPPGARARVALTGLSVAEYFRDQ 331

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 332 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 389

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     
Sbjct: 390 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNVVG 449

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 450 QEHYDIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 502


>gi|229816332|ref|ZP_04446639.1| hypothetical protein COLINT_03382 [Collinsella intestinalis DSM
           13280]
 gi|229808088|gb|EEP43883.1| hypothetical protein COLINT_03382 [Collinsella intestinalis DSM
           13280]
          Length = 538

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/444 (22%), Positives = 175/444 (39%), Gaps = 30/444 (6%)

Query: 4   NLETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NS 56
           N E + Q+      +L       +  +++ +      +  L +    G+ +         
Sbjct: 6   NAENIEQILRQRLYDLSATVDTQEVSHVAEVGDGIAHIFGL-KSAMAGELLEFTSSITGK 64

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDG 115
              G    ++ + V     G  + I  GD     GR   I       GRV+N LG+PIDG
Sbjct: 65  TVYGLAQNLDREEVGAVLFGDVDSIKEGDACRTTGRVMDIPVGRGMLGRVVNPLGQPIDG 124

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
             S+G+      I  K P  + R  V +  +TG+  +D   P+  GQR  +      GK+
Sbjct: 125 KGSVGET-HRRPIEFKAPGVIERTPVCEPVQTGLLAVDAMIPIGRGQRELIIGDRKTGKT 183

Query: 176 TLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
            +      +        +   +G++   V    E          +V+V AT+ +S  L+ 
Sbjct: 184 AIAIDAIINQRGKGMICVYVAIGQKASTVANIRETLAQHGALDYTVIVSATAADSAPLQY 243

Query: 233 MAPLTAVTIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVAR 280
           +AP+    I EYF   G+            +VL+I D +++ A + R+++      P   
Sbjct: 244 IAPMAGAAIGEYFMYNGEDGQPASATNPGGHVLVIYDDLSKQAVAYRQMSLTLRRPPGRE 303

Query: 281 GYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
            YP  +F    RLLER     ++   G++TA+  +     + +  I  +V SI DG I L
Sbjct: 304 AYPGDIFYLHSRLLERACKLSEKNGGGSLTALPIIETQDGDVSAYIPTNVISITDGQIYL 363

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L  +G+ P VD   SVSR+   A +   K+   +L   +  + E         +   
Sbjct: 364 QSELFHQGQRPAVDVGISVSRVGGSAQTKAMKQQAGNLRLDLASYREL---AGFTQFGSD 420

Query: 399 VDLILDKAVHQVPIIYDFLKQSPS 422
           +D    K +     + + LKQ   
Sbjct: 421 LDATTQKQLTHGARMTELLKQGRF 444


>gi|15612125|ref|NP_223777.1| F0F1 ATP synthase subunit beta [Helicobacter pylori J99]
 gi|9910638|sp|Q9ZK81|ATPB_HELPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|4155651|gb|AAD06639.1| ATP synthase F1, subunit beta [Helicobacter pylori J99]
          Length = 469

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I  +      V   S    + + + ++   N      V+     +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKALVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 410


>gi|289498345|gb|ADC99211.1| ATP synthase F1 alpha subunit [Vibrio crassostreae]
          Length = 441

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEHYVEEFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|29726122|gb|AAD00588.2| ATP synthase beta subunit [Platanus occidentalis]
          Length = 488

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D          S  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGXXXXRTXS-PIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|4206598|gb|AAD11730.1| ATP synthase beta subunit [Sarcomelicope simplicifolia]
          Length = 471

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESVVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|34556938|ref|NP_906753.1| F0F1 ATP synthase subunit beta [Wolinella succinogenes DSM 1740]
 gi|1168583|sp|P42470|ATPB_WOLSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|587588|emb|CAA54207.1| ATPase beta-subunit [Wolinella succinogenes]
 gi|34482653|emb|CAE09653.1| ATP SYNTHASE F1 SECTOR BETA SUBUNIT [Wolinella succinogenes]
          Length = 467

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 117/409 (28%), Positives = 193/409 (47%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVV----HQGKNSDNLGQVIRINLD-IVYICPVGIG 78
           G I+ +      V   S    + + +      +G     + +V     D  V    + + 
Sbjct: 3   GRITQVMGPVVDVDFDSYLPAINEALDVNYDIEGHPKKLVLEVAAHIGDSRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G+   +       GR+ N +G  IDG D L K  +   I    P   N
Sbjct: 63  EGLTRGTKVVARGKSIEVPVGEQVLGRIFNVVGDVIDGGDEL-KEPVKWSIHRTAPTFEN 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      D  K
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + +  ++ ++++ +DI  I G     +    + V +   I  FL Q 
Sbjct: 360 TATGVQQVLQKYKDLQDIIAILGMDELSEED-KRVVERARRIEKFLSQP 407


>gi|15430328|gb|AAK95922.1| ATP synthase beta subunit [Attalea butyracea]
          Length = 496

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQGVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7708566|emb|CAB89955.1| ATP synthase beta subunit [Pyrenacantha malvifolia]
          Length = 489

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTAGQSINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I R   +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|13236802|gb|AAK14706.1| ATP synthase beta subunit [Orbignya barbosiana]
          Length = 494

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQGVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|225572845|ref|ZP_03781600.1| hypothetical protein RUMHYD_01036 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039771|gb|EEG50017.1| hypothetical protein RUMHYD_01036 [Blautia hydrogenotrophica DSM
           10507]
          Length = 465

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 16/419 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGEEI 81
           G I  +      V     +   + D +       + + +V +   + IV    +   E +
Sbjct: 4   GKIVQVMGPVVDVEFKDGELPSIQDALKVNNGGKECVMEVSQHMGNHIVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ IDG + L   +   EI  + P    +  
Sbjct: 64  CRDMEVTATGSGIQVPVGDQVLGRLFNVLGQTIDGKEPLDNAE-HWEIHREPPTFEEQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    ++   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +      +KK+ +V    +E P  R     T +T+AEYF   +  +VLL 
Sbjct: 183 RSREGNDLWTEMSESGVIKKTALVFGQMNEPPGARMRVAETGLTMAEYFRDKENQDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLANEMGALQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  +   
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYETAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            +  ++ +++E +DI  I G     +    K V +   I  FL Q        + F  I
Sbjct: 361 KVQEILQKYKELQDIIAILGMEELSEDD-KKIVFRARKIQKFLSQP---FHVAETFTGI 415


>gi|157285075|gb|ABV31277.1| ATPase [Vibrio hispanicus]
          Length = 441

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|157285035|gb|ABV31257.1| ATPase [Vibrio cincinnatiensis]
          Length = 441

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++S G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLSEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDAMIPIGRGQRELIIGDRQTGKTALAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  K ++VVVA++ ES  L+ +AP +   + E+F  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALKNTIVVVASASESAALQYLAPYSGCAMGEFFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVSEEYVERFTQGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E         +   +D    + ++    + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYREL---AAFAQFASDLDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|124361748|gb|ABN09316.1| ATP synthase beta subunit [Diospyros undulata]
          Length = 465

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLYTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|63091877|emb|CAH58789.1| ATP synthase alpha chain [Enterococcus pallens]
          Length = 367

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 154/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIVLGEFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+P+DG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDNMIGRVVNPLGQPVDGLGPI-ETSKTRPVETLAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKESTVRSQVETLRK 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              L  ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGALDYTIVVTAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLVVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  F E   
Sbjct: 296 ISITDGQIFLENDLFYSGIRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASFRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|13236760|gb|AAK14685.1| ATP synthase beta subunit [Prestoea acuminata]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|85712587|ref|ZP_01043634.1| ATP synthase subunit B [Idiomarina baltica OS145]
 gi|85693578|gb|EAQ31529.1| ATP synthase subunit B [Idiomarina baltica OS145]
          Length = 461

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/409 (27%), Positives = 185/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G +  I             V        V +G     + +V + +   IV    +G 
Sbjct: 1   MSQGKVVQIIGAVVDFEFPQDAVPKVYDALKVTEGNLEGLVLEVQQQLGGGIVRAIAMGT 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G +  + G    +       GR++N LG+PID    +G+ +  M I    P   
Sbjct: 61  TDGLRRGIIAENTGEPIMVPVGKKTLGRIMNVLGQPIDEAGPIGEEE-RMSIHRAAPTYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +       +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + +
Sbjct: 120 EQSNTSDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F  +G +V
Sbjct: 180 GVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +
Sbjct: 240 LFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD  +VLNR +A  G YP VDPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLNRDIASLGIYPAVDPLDSTSRQLDPLVIGEEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 TAMGVQEVLQRYKELKDIIAILGMDELSEED-KRTVARARKIQRFLSQP 405


>gi|270291020|ref|ZP_06197243.1| ATP synthase F1, beta subunit [Pediococcus acidilactici 7_4]
 gi|304385296|ref|ZP_07367641.1| ATP synthase F1 sector beta subunit [Pediococcus acidilactici DSM
           20284]
 gi|270280416|gb|EFA26251.1| ATP synthase F1, beta subunit [Pediococcus acidilactici 7_4]
 gi|304328503|gb|EFL95724.1| ATP synthase F1 sector beta subunit [Pediococcus acidilactici DSM
           20284]
          Length = 469

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/424 (27%), Positives = 194/424 (45%), Gaps = 17/424 (4%)

Query: 21  VQGGYISSITSVYYTVTCL--SQYVCLGD-FVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +  G +  +      V      +   + +   + +   +  + +V + +   +V    + 
Sbjct: 1   MSTGKVVQVIGPVIDVEFPLDEEIPTINNALKIKKADGTILVSEVTLELGDGVVRTIAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G   ++       GRV N LG+ IDG   LG       I    P  
Sbjct: 61  GTEGLQRGLEVEDTGDSIKVPVGDETLGRVFNVLGETIDGGKELGPDIKRDPIHRDPPEY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   IS+ 
Sbjct: 121 DELNPSTEILETGIKVIDLLAPYIRGGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + +++ +V    +E P  R    LT +TIAE+F      
Sbjct: 181 TGVGERTREGNDLYFEMKESGVLERTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVEGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D++ DP   +  + LD    L RSL ++G YP VDPLAS S   D      + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLASTSTALDPEIVGEEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++ S + H++ R++E +DI  I G     D      V +   I  FL Q   D S    
Sbjct: 359 YEVASEVQHVLQRYKELQDIISILGMDELSDEE-KTVVARARRIQLFLSQ---DFSVAAQ 414

Query: 430 FQEI 433
           F  +
Sbjct: 415 FTGL 418


>gi|242310682|ref|ZP_04809837.1| ATP synthase subunit beta [Helicobacter pullorum MIT 98-5489]
 gi|239523080|gb|EEQ62946.1| ATP synthase subunit beta [Helicobacter pullorum MIT 98-5489]
          Length = 467

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 192/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I  +      +   S    + + +    V   ++   + +V     D  V    + + 
Sbjct: 3   GKIIQVMGPVVDIDFESYLPAINEALDIDFVVDNQSRKLVLEVAAHIGDNRVRAIAMDMT 62

Query: 79  EEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G+ V        +       GR+ N  G  IDG + L   +    I    P   N
Sbjct: 63  EGLTRGEKVVARGNPITVPVGEQVLGRIFNVTGDVIDGGEELNNPE-KWSIHRAAPTFEN 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + +S+  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 IATSVQQVLQKYKDLQDIIAILGMDELSEED-KKVVERARKIEKFLSQP 407


>gi|119479209|ref|XP_001259633.1| ATP synthase F1, beta subunit, putative [Neosartorya fischeri NRRL
           181]
 gi|119407787|gb|EAW17736.1| ATP synthase F1, beta subunit, putative [Neosartorya fischeri NRRL
           181]
          Length = 519

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 190/438 (43%), Gaps = 21/438 (4%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVY 71
            ++ +     G I  +      V      +  + + +  +      + +V   +  ++V 
Sbjct: 39  RFASSEAGSVGKIHQVIGAVVDVKFDGDNLPAILNAIETENNGQKLVLEVSQHLGENVVR 98

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   E ++ G      G   +I       GR++N  G PID    +     +  I +
Sbjct: 99  TIAMDGTEGLTRGAPARDTGAPIKIPVGPATLGRIVNVTGDPIDERGPIKATKFA-PIHA 157

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +      
Sbjct: 158 EAPEFIEQSTSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHG 217

Query: 191 IISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
             S+   VGER RE  +   +         +   K  +V    +E P  R    LT +TI
Sbjct: 218 GYSVFTGVGERTREGNDLYHEMQETGVIQLEGESKVALVFGQMNEPPGARARVALTGLTI 277

Query: 242 AEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +
Sbjct: 278 AEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--T 335

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 336 TTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRM 395

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +   + + +  ++  ++  +DI  I G     +      V +   +  FL Q
Sbjct: 396 LDPRIVGEEHYAVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQ 454

Query: 420 SPSDLSSEDVFQEITKKL 437
                +   VF  I  KL
Sbjct: 455 P---FTVAQVFTGIEGKL 469


>gi|90415349|ref|ZP_01223283.1| flagellum-specific ATP synthase FliI [marine gamma proteobacterium
           HTCC2207]
 gi|90332672|gb|EAS47842.1| flagellum-specific ATP synthase FliI [marine gamma proteobacterium
           HTCC2207]
          Length = 444

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 150/441 (34%), Positives = 219/441 (49%), Gaps = 7/441 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDN 58
           M      +            +  G +  +  +      +     LG     +     +  
Sbjct: 1   MHDFAADIDSQIAQLKAPETIASGKLVRVVGLTLEAKGI--IAPLGAHCRVENIDMGTVV 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
             +V+  N D +Y+ P      I  G  V+   R  + S      GRVI+ LG+P+D   
Sbjct: 59  DAEVVGFNDDTLYLMPFSEPVGIGPGARVWVVSRHAKASLGEAMLGRVIDGLGQPLDEGG 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   +  + +       M R  + K   TGI+ I+    L  GQRIG+ AGSG+GKS L
Sbjct: 119 PIAYSEQ-LGLEGLAINPMERGPISKILDTGIKAINTCLTLGQGQRIGLVAGSGVGKSVL 177

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M  R+   D V+I L+GERGREV+EFI      + L KSVVV A ++ SP+LR  A  
Sbjct: 178 LGMLTRNTEADVVVIGLIGERGREVQEFIQHTLGEEGLAKSVVVAAPANISPVLRLKATY 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
               IAEYF  +G NVL++ DS+TR AH+ REI    GE P A+GYP SVF+ LPRL+ER
Sbjct: 238 LTHLIAEYFRDRGKNVLMLCDSLTRVAHAQREIGLAIGEPPTAKGYPPSVFAMLPRLIER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G   K  G+ITA+ +VL +GD+  DPI D  R+ LDG ++L+RSLA+   YP +D   S
Sbjct: 298 TGVGRKGHGSITAIYTVLAEGDDRADPIVDIARASLDGQVLLSRSLADAAHYPAIDLSGS 357

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+     + D  K  +    L   +++  D+  +G Y  G +  LD+A+     +   
Sbjct: 358 ISRVMPNLVAPDVFKAANRFRRLWTLYQQNEDLIQVGAYEAGTNPDLDEAIRLRLGMEAI 417

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           L+Q   +       Q I  +L
Sbjct: 418 LRQGSDESVPLAQSQAIVMQL 438


>gi|13236700|gb|AAK14655.1| ATP synthase beta subunit [Chelyocarpus repens]
          Length = 498

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  ++    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALIYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|46579188|ref|YP_009996.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603238|ref|YP_967638.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris DP4]
 gi|81830486|sp|Q72E04|ATPB_DESVH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|166201699|sp|A1VFJ5|ATPB_DESVV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|46448601|gb|AAS95255.1| ATP synthase, F1 beta subunit [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563467|gb|ABM29211.1| ATP synthase F1 subcomplex beta subunit [Desulfovibrio vulgaris
           DP4]
 gi|311233026|gb|ADP85880.1| ATP synthase F1, beta subunit [Desulfovibrio vulgaris RCH1]
          Length = 470

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/415 (26%), Positives = 192/415 (46%), Gaps = 17/415 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS----DNLGQV-IRINLDIVYI 72
           +    G I  +      V   S  +  + + +  +  N+    D + +V   +  +IV  
Sbjct: 1   MSANIGKIVQVIGAVVDVEFPSGQLPNILNALDIKNPNNTDAPDLVCEVAQHLGDNIVRT 60

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G      G+   +       GR++N +G+P+D    +   D S+ I   
Sbjct: 61  IAMDATEGLVRGMEASDTGKPIMVPVGKASLGRIMNVVGRPVDELGPIN-ADKSLPIHRA 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P    +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +       
Sbjct: 120 APEFTEQNTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGG 179

Query: 191 --IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  +   +     + +K+ ++    +E P  R    LTA+  AEYF  
Sbjct: 180 ISVFAGVGERTREGNDLYHEMKDAGVLEKAALIYGQMNEPPGARARVALTALACAEYFRD 239

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+
Sbjct: 240 VENQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTTKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +  ++ ++++ +DI  I G     D      V +   I  FL Q 
Sbjct: 358 GVEHYGVARQVQQVLQKYKDLQDIIAILGMDELSDED-KLTVARARRIQRFLSQP 411


>gi|72534373|emb|CAH58804.1| ATP synthase alpha chain [Enterococcus sp. LMG 14161]
          Length = 367

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   GR  
Sbjct: 1   RAHGL-ENAMSGELLQFSNGS---FGMAQNLESNDVGIIILGDFETIREGDKVKRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + +   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPIDGLGPI-ETTKTRPVEAMAPGVMQRKSVHEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRAQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A S +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVAAGSSQPAPLLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGIRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDTAT 367


>gi|148260678|ref|YP_001234805.1| F0F1 ATP synthase subunit beta [Acidiphilium cryptum JF-5]
 gi|190358247|sp|A5FZ54|ATPB_ACICJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146402359|gb|ABQ30886.1| ATP synthase F1 subcomplex beta subunit [Acidiphilium cryptum JF-5]
          Length = 476

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/416 (25%), Positives = 183/416 (43%), Gaps = 21/416 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I+ I      V    +   + + +  +  +   + +V   I    V    +   + 
Sbjct: 5   VTGRITQIMGPVVDVQFEGELPYILNALETRVGDRRLVLEVAQEIGERTVRCIAMDSTDG 64

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ GD V   G    +       GR++N +G+PID    +     +  I  + P    + 
Sbjct: 65  LARGDEVRDTGEAIAVPVGPETLGRILNVIGEPIDERGPIPTT-RTAPIHRQAPSFDEQA 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 124 TSAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVG 183

Query: 197 ERGREVREFIEDYLGDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           ER RE  +   + +   +           K  +V    +E P  R    L+ +T+AEYF 
Sbjct: 184 ERTREGNDLYHEMIDAGVIKLGEGTTEGSKVALVYGQMNEPPGARMRVGLSGLTMAEYFR 243

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG
Sbjct: 244 DEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKG 301

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  S LD    LNR++AE+G YP VDPL S SR  D   
Sbjct: 302 SITSVQAIYVPADDLTDPAPATSFSHLDATTTLNRAIAEKGIYPAVDPLDSTSRALDPRI 361

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 362 VGEEHYNVAREVQRILQSYKSLQDIIAILGMDELSEDD-KLTVARARKIERFLSQP 416


>gi|289498381|gb|ADC99229.1| ATP synthase F1 alpha subunit [Vibrio splendidus]
          Length = 441

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  + R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIERKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|121713468|ref|XP_001274345.1| ATP synthase F1, beta subunit, putative [Aspergillus clavatus NRRL
           1]
 gi|119402498|gb|EAW12919.1| ATP synthase F1, beta subunit, putative [Aspergillus clavatus NRRL
           1]
          Length = 520

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/430 (25%), Positives = 187/430 (43%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
             G I  +      V      +  + + +  +      + +V   +  ++V    +   E
Sbjct: 47  SVGKIHQVIGAVVDVKFDGDKLPAILNAIETENNGQKLVLEVSQHLGENVVRTIAMDGTE 106

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G      G   +I       GR++N  G PID    +     +  I ++ P  + +
Sbjct: 107 GLTRGAPAHDTGAPIKIPVGPATLGRIVNVTGDPIDERGPIKATKFA-PIHAEAPEFIEQ 165

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   V
Sbjct: 166 STSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGV 225

Query: 196 GERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           GER RE  +   +         D   K  +V    +E P  R    LT +TIAEYF  + 
Sbjct: 226 GERTREGNDLYHEMQETGVIKLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEE 285

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +  +KG+IT
Sbjct: 286 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSIT 343

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      
Sbjct: 344 SVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGE 403

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  +  + +  ++  ++  +DI  I G     +      V +   +  FL Q     +  
Sbjct: 404 EHYQTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQP---FTVA 459

Query: 428 DVFQEITKKL 437
            VF  I  KL
Sbjct: 460 QVFTGIEGKL 469


>gi|113910878|gb|ABI48171.1| ATPase beta subunit [Rhizogonium paramattense]
          Length = 456

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 12  KGQNTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGESTLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++ +
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAS 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|7687976|emb|CAB89709.1| ATP synthase beta subunit [Eupomatia bennettii]
          Length = 498

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIE 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|78103257|ref|YP_358583.1| ATP synthase CF1 beta subunit [Phalaenopsis aphrodite subsp.
           formosana]
 gi|118573716|sp|Q3BAN5|ATPB_PHAAO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|58802787|gb|AAW82507.1| ATP synthase CF1 beta chain [Phalaenopsis aphrodite subsp.
           formosana]
          Length = 498

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V   S  +  + + ++ +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVIFPSGKMPNIYNALIIKGRDTVGHQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|302880125|ref|YP_003848689.1| ATP synthase F1, beta subunit [Gallionella capsiferriformans ES-2]
 gi|302582914|gb|ADL56925.1| ATP synthase F1, beta subunit [Gallionella capsiferriformans ES-2]
          Length = 465

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/362 (29%), Positives = 169/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V +      +   A   GR+++ LG+PID    +   +
Sbjct: 52  LGDGVVRTIAMGSSDGLQRGMAVVNTNAPISVPVGAGTLGRIMDVLGRPIDDAGEI-PCE 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P            +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 ERRPIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 171 NIAKQHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVSMVFGQMNEPPGNRLRVALTGL 230

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G ++L  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  
Sbjct: 231 TMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI-- 288

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +    LD  +VL+R +A  G YP VDPL S SR
Sbjct: 289 TSTKVGSITSVQAVYVPADDLTDPAPATTFLHLDSTVVLSRDIASLGIYPAVDPLDSSSR 348

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D     +E   +   +   + R++E RDI  I G    +      AV +   I  FL 
Sbjct: 349 QLDPLVVGEEHYSVARRVQQNLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLS 407

Query: 419 QS 420
           Q 
Sbjct: 408 QP 409


>gi|183206520|gb|ACC54458.1| ATP synthase beta subunit [Triodanis perfoliata]
          Length = 468

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D+LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 20  KGRDSLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGLEVIDTGTPLSVPVGGATLGR 79

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 80  IFNVLGEPIDNLGPVDTLTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 138

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 139 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQNFA 198

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 199 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 258

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 259 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTFAHL 316

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 317 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 376

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 377 ILGLDELSEDD-RLTVARARKIERFLSQP 404


>gi|13236786|gb|AAK14698.1| ATP synthase beta subunit [Burretiokentia hapala]
          Length = 498

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYXRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708544|emb|CAB89969.1| ATP synthase beta subunit [Plagiopteron suaveolens]
          Length = 487

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 183/412 (44%), Gaps = 24/412 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIGEEIS 82
           I  V        +   + + +V +G+++     + + +V ++  +  V    +   + + 
Sbjct: 21  IGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMSATDGLM 80

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +     +  I    P  +  +  
Sbjct: 81  RGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLETK 139

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   ER
Sbjct: 140 LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGER 199

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 200 TREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNE 259

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+
Sbjct: 260 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITS 317

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        +
Sbjct: 318 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEE 377

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 HYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|295311736|ref|YP_003587472.1| ATP synthase CF1 subunit beta [Oncidium Gower Ramsey]
 gi|254833113|gb|ACT83116.1| ATP synthase CF1 subunit beta [Oncidium Gower Ramsey]
          Length = 498

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V QG   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVIFPPGKMPNIYNALVIQG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTNLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKDIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|156622733|dbj|BAF76347.1| ATP synthase beta subunit [Chimonanthus praecox]
          Length = 487

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|113910834|gb|ABI48149.1| ATPase beta subunit [Metzgeria conjugata]
          Length = 472

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 178/414 (42%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V        +   + + +V +G+NS   GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDIAFSPGKMPSIYNCLVVRGQNSA--GQEINVTCEVQQLLGNNKVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V   G    +       GR+ N LG+P+D    +     +  I    P      
Sbjct: 63  LMREMEVADTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVNAV-TTFPIHRSAPAFTQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDX 241

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+I
Sbjct: 242 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVG 359

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 EEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIXRFLSQP 412


>gi|269796395|ref|YP_003315850.1| type III secretion system ATPase, FliI/YscN [Sanguibacter keddieii
           DSM 10542]
 gi|269098580|gb|ACZ23016.1| type III secretion system ATPase, FliI/YscN [Sanguibacter keddieii
           DSM 10542]
          Length = 459

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 164/423 (38%), Positives = 244/423 (57%), Gaps = 14/423 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDIVYICPVGI 77
           + G +S+   +   V  L     LGD +      +G ++  L +V+ +        P+G 
Sbjct: 35  RVGQVSAAVGLSLDVVGLDC--ALGDVLALGETGRGSDASMLAEVVAVTGSTARCMPLGA 92

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              I  G      G   ++   +   GRV++ LG+P+DG   L  G  ++ +  + P  +
Sbjct: 93  MRGIRPGLQARTTGGALQVPVGSGLLGRVVDGLGRPLDGRGPLV-GTTTVPLDGRAPHPL 151

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            RQRV +    G+R +D  T +  GQR+G+FAGSG+GKSTLLSM AR       +I+LVG
Sbjct: 152 ERQRVAQPLTLGVRTLDTLTTVGRGQRMGLFAGSGVGKSTLLSMVARGTDAAVSVIALVG 211

Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREF+ED LG + L +SVVVVATSDE  ++R  A   A  IAE F   G++V+L+
Sbjct: 212 ERGREVREFLEDDLGPEGLARSVVVVATSDEPALVRLRAAFVATRIAESFRESGEDVVLM 271

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TR A + REI  + GE P  RGYP S FS L  LLER G S   +G++T + +VLV
Sbjct: 272 MDSLTRVAMAQREIGLSVGEPPATRGYPPSTFSVLAELLERAGTSA--RGSVTGIYTVLV 329

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+HN+PIAD+ RSILDGH+VL+R LA  G +P +D L S+SR+A +  SA ++   ++
Sbjct: 330 DGDDHNEPIADAARSILDGHVVLDRRLAVAGHFPSIDALGSISRVATRVTSAAQRADATA 389

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L  ++      +D+  +G Y  G + ++D A+     I  FL+Q   + +     ++   
Sbjct: 390 LRKVMSARRAVQDLVDVGAYVQGSNPLVDAALAHQGAIDAFLQQGVDEPAPS---EQSWA 446

Query: 436 KLQ 438
            L+
Sbjct: 447 ALR 449


>gi|237688477|ref|YP_002905096.1| ATP synthase CF1 beta subunit [Picea sitchensis]
 gi|237688609|ref|YP_002905226.1| ATP synthase CF1 beta subunit [Pinus gerardiana]
 gi|324986376|ref|YP_004276248.1| ATP synthase CF1 beta subunit [Pinus lambertiana]
 gi|226875305|gb|ACO89044.1| ATP synthase CF1 beta subunit [Picea sitchensis]
 gi|226876069|gb|ACO89325.1| ATP synthase CF1 beta subunit [Pinus gerardiana]
 gi|228016133|gb|ACP50970.1| ATP synthase CF1 beta subunit [Pinus sibirica]
 gi|228016199|gb|ACP51035.1| ATP synthase CF1 beta subunit [Pinus squamata]
 gi|228016260|gb|ACP51095.1| ATP synthase CF1 beta subunit [Pinus strobus]
 gi|228016640|gb|ACP51469.1| ATP synthase CF1 beta subunit [Pinus albicaulis]
 gi|228016771|gb|ACP51598.1| ATP synthase CF1 beta subunit [Pinus armandii]
 gi|228016895|gb|ACP51720.1| ATP synthase CF1 beta subunit [Pinus ayacahuite]
 gi|228017141|gb|ACP51962.1| ATP synthase CF1 beta subunit [Pinus cembra]
 gi|228017264|gb|ACP52083.1| ATP synthase CF1 beta subunit [Pinus flexilis]
 gi|228017329|gb|ACP52147.1| ATP synthase CF1 beta subunit [Pinus lambertiana]
 gi|228017522|gb|ACP52337.1| ATP synthase CF1 beta subunit [Pinus monticola]
 gi|228017585|gb|ACP52399.1| ATP synthase CF1 beta subunit [Pinus parviflora var. pentaphylla]
 gi|228017649|gb|ACP52462.1| ATP synthase CF1 beta subunit [Pinus peuce]
 gi|323514225|gb|ADX89772.1| ATP synthase CF1 beta subunit [Pinus lambertiana]
          Length = 492

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V+    Y+  + + +  QG+ +   GQ I++  ++        V    
Sbjct: 19  GYIAQIIGPVLDVSFSPGYMPNIYNSLKVQGQGTA--GQEIQVTCEVQQLLGNHKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 77  MSATDGLTRGMTVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARITSPIHRTAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 432


>gi|75330429|sp|Q8MBG5|ATPB_CUSPE RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633447|gb|AAM52198.1| ATP synthase beta subunit [Cuscuta pentagona]
          Length = 487

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/416 (27%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           GYI  I      V         + + +V QG++    +   +V ++  +  V    +   
Sbjct: 20  GYIVQIIGPVLDVPFSPGMXPSIYNALVVQGRHKQEPNVTCEVQQLLGNNRVRAVAMSDT 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +    LS  I    PP + 
Sbjct: 80  DGLMRGMEVIDTGTPISVPVGGSTLGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLK 138

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S+ G 
Sbjct: 139 LDTRLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGG 198

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 199 VGERTREGNDLYMEMKESGVINQQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 258

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 259 DVNRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 316

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +     
Sbjct: 317 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQI 376

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 K    +   + R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 377 VGKQHYKTAQRVKQTLQRYKELQDIIAILGLDELSDDD-RLTVARARKIERFLSQP 431


>gi|71894420|ref|YP_278528.1| F0F1 ATP synthase subunit beta [Mycoplasma synoviae 53]
 gi|118573701|sp|Q4A604|ATPB_MYCS5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71851208|gb|AAZ43817.1| ATP synthase beta chain [Mycoplasma synoviae 53]
          Length = 464

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/363 (30%), Positives = 174/363 (47%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  D V    +     +  G  V   G+   +       GR+ + LG PID    L +G 
Sbjct: 51  IGDDTVRCISMVSTNGLRRGLTVEDTGKAIMVPVGKQVLGRMFDVLGNPIDEL-PLEEGG 109

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I   +P    ++   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 110 EKSSIHGPIPTYEQQKTTSEILETGIKVIDLLIPYAKGGKIGLFGGAGVGKTVLVQELIN 169

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +   +     +  K+ +V    +E P  R    LT +
Sbjct: 170 NIATQHNGLSVFTGVGERTREGNDLYYEMKAAGVLDKTALVFGQMNEPPGARMRVALTGL 229

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 230 TMAEYFRDKQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI- 288

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +    G+IT+V +V V  D+  DP   +  S LD   VL+R++A  G YP +DPL S S
Sbjct: 289 -TSTRSGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVLDRNVAALGIYPAIDPLESSS 347

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           RL D      +  K+   + +++ RF+E +DI  I G     +    K V +   I +FL
Sbjct: 348 RLLDPLVVGQEHYKVAQDVINILQRFKELQDIIAILGMGELSEED-KKIVARARKIRNFL 406

Query: 418 KQS 420
            Q 
Sbjct: 407 SQP 409


>gi|307294136|ref|ZP_07573980.1| ATP synthase F1, beta subunit [Sphingobium chlorophenolicum L-1]
 gi|306880287|gb|EFN11504.1| ATP synthase F1, beta subunit [Sphingobium chlorophenolicum L-1]
          Length = 481

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 27/434 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      VT       +   +         + +V   +  + V    +   + ++
Sbjct: 8   GRISQVIGAVVDVTFPDALPAILSALETSNNGQRLVLEVAQHLGENTVRTIAMDSTDGLT 67

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G +  +       GR++N +G+PID    + +  LS  I +K P  +++   
Sbjct: 68  RGQEVTDTGAQISVPVGPATLGRILNVVGEPIDERGPV-ETTLSAPIHAKAPEFVDQSTD 126

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 127 ASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGER 186

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   ++L   +              K  +V    +E P  R    L+ +TIAEYF
Sbjct: 187 TREGNDLYHEFLDAGVIAKDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYF 246

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 247 RDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTNK 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SR+ +  
Sbjct: 305 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPR 364

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +  +   ++  ++ +++  +DI  I G     +      V +   I  FL Q    
Sbjct: 365 VVGQEHYETARAVQAILQKYKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP--- 420

Query: 424 LSSEDVFQEITKKL 437
               +VF  I+ K 
Sbjct: 421 FHVAEVFTGISGKF 434


>gi|228015941|gb|ACP50781.1| ATP synthase CF1 beta subunit [Pinus ponderosa]
          Length = 492

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 193/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S ++    G I+ I      V+     +  + + +  +G+ +   
Sbjct: 1   MRKNPLVLG-----VSASVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPTDDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|156720265|dbj|BAF76781.1| beta subunit of ATP synthesis [Davallia chaerophylloides]
          Length = 464

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEDD-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|124361782|gb|ABN09333.1| ATP synthase beta subunit [Lissocarpa kating]
          Length = 451

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 414


>gi|119182499|ref|XP_001242378.1| ATP synthase beta chain, mitochondrial [Coccidioides immitis RS]
          Length = 521

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 190/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQVIR 64
            L  L+  Y+     + G I  +      V   ++     L       G     L     
Sbjct: 34  ALRALSARYASTEAGKTGKIHQVIGAVVDVKFDTEQLPAILNALETENGGQRLVLEVAQH 93

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G      G   +I       GR++N  G PID    + KG 
Sbjct: 94  LGENVVRTIAMDGTEGLVRGAKAVDTGAPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGV 152

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 153 KLAPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 212

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 213 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 272

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 273 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGVM 332

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 333 QERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 390

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D     D   ++ + +  +I  ++  +DI  I G     +      V +   
Sbjct: 391 LDSKSRMLDPRIVGDEHYQVATRVQQMIQEYKSLQDIIAILGMDELSEAD-KLTVERARK 449

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I  KL
Sbjct: 450 LQRFLSQP---FAVAQVFTGIEGKL 471


>gi|7706844|emb|CAB90038.1| ATP synthase beta subunit [Actinidia chinensis]
          Length = 489

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 177/389 (45%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 41  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G ++  I    P  +  +     F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVDTG-ITSPIHRSAPAFVQLETKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSNEHYETAQRVKQTLQRYKELQDIIT 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEDD-RLTVARARKIERFLSQP 425


>gi|20978445|gb|AAC79946.2| ATP synthase beta subunit [Biebersteinia orphanidis]
          Length = 456

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVGQQINVTCEVQQLLGNNRVKAVAMSATDXLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      BVLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQBVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTXEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|6017840|gb|AAF01654.1| ATP synthase beta subunit [Schisandra chinensis]
          Length = 480

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 3   GRITQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 59

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 60  AMSATDGLMRGMKVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVDTLTTS-PIHRSA 118

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 119 PAFIQLDTKLSIFXTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 178

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 179 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 238

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 239 AEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 296

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 297 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 356

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 357 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 415

Query: 420 S 420
            
Sbjct: 416 P 416


>gi|194332903|ref|YP_002014763.1| F0F1 ATP synthase subunit beta [Prosthecochloris aestuarii DSM 271]
 gi|194310721|gb|ACF45116.1| ATP synthase F1, beta subunit [Prosthecochloris aestuarii DSM 271]
          Length = 462

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/412 (28%), Positives = 190/412 (46%), Gaps = 18/412 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +     +   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGQLPSILDALTVARPDGSKL--VLETQQHLGDERVRAIAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V + G+  ++       GR++N +G+PIDG   +   D +  I    P 
Sbjct: 59  EGTEGLVRGIPVINTGKPIQVPVGQNVLGRMLNVVGEPIDGMGDID-SDTTRSIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVI 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         +
Sbjct: 118 FDELSTKSEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            + VGER RE  +  E+      + K+ +V    +E P  R    LT ++IAEYF   + 
Sbjct: 178 FAGVGERTREGNDLWEEMKESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDVEH 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI     + G++T+
Sbjct: 238 RDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTEMGELQDRI--VSTKDGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATTFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 ++  ++ R+++ +DI  I G     D      V +   I  FL Q 
Sbjct: 356 HYDTAQAVKEILQRYKDLQDIIAILGMDELSDED-KLVVSRARKIQRFLSQP 406


>gi|257853472|gb|ACV71738.1| ATP synthase beta subunit [Johnsonia pubescens]
          Length = 479

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATEGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|241912884|gb|ACS72120.1| AtpB [Porphyrostachys parviflora]
          Length = 489

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+G++ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|158602243|gb|ABW74588.1| ATP synthase beta subunit [Actaea pachypoda]
          Length = 478

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATEGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|123325583|gb|ABM74416.1| ATP synthase beta subunit [Bergera koenigii]
 gi|123325655|gb|ABM74452.1| ATP synthase beta subunit [Clausena harmandiana]
          Length = 466

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|113910786|gb|ABI48125.1| ATPase beta subunit [Lophozia gillmani]
          Length = 456

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   V 
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVS 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAISGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|112791376|gb|ABI21958.1| ATP synthase beta subunit [Pectobacterium atrosepticum]
 gi|112791378|gb|ABI21959.1| ATP synthase beta subunit [Pectobacterium betavasculorum]
          Length = 421

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 177/379 (46%), Gaps = 10/379 (2%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
             V  G     L    ++   IV    +G  + +  G  V + G    +       GR++
Sbjct: 5   LEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLGHPIEVPVGKATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGDIGEEE-RWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSEE 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|3273574|gb|AAC24769.1| F1-ATPase alpha subunit [Piper nigrum]
          Length = 421

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 89/412 (21%), Positives = 164/412 (39%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVIFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G             RV++ALG PIDG  +    +    +  K P  + R+ V +  +
Sbjct: 58  KXTGSIVDVLAGKXMLXRVVDALGVPIDGRGAXSDHE-RRRVEVKAPGIIERKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 117 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTDESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVS     A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSXXGSAAQLKAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +  +  +   +D +     H+   + +  KQ   + 
Sbjct: 357 RGSSKLELAQYRE---VAALAQFGSDLDAVTQALPHRGARLTEVPKQPQYEP 405


>gi|11908164|gb|AAD11742.2| ATP synthase beta subunit [Swietenia macrophylla]
          Length = 477

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDIVYI--------CPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  B +GQ I +  ++  +          +   + ++ G  V   G    +       GR
Sbjct: 36  KGXBTVGQPINVTCEVQQLLGNNRXXAVAMIATDGLTRGMEVIDTGAPLSVPVGGATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 96  IFNVLGEPVDNLGPVDTLTTS-PIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 154

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 155 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 215 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 274

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 275 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 332

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 333 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 392

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 393 ILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|71833742|emb|CAH58805.1| ATP synthase alpha chain [Enterococcus canintestini]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---FGMAQNLETNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +     +  + +  P  M RQ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGEISTT-STRPVETLAPGVMQRQSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQNMICIYVAIGQKDSTVRAQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGVRPAIDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDQAT 367


>gi|329114830|ref|ZP_08243587.1| ATP synthase subunit beta [Acetobacter pomorum DM001]
 gi|326695961|gb|EGE47645.1| ATP synthase subunit beta [Acetobacter pomorum DM001]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/432 (26%), Positives = 184/432 (42%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ I      V    +   + +   V  G  +  L     I    V    +   + + 
Sbjct: 20  GRITEIKGPVVDVQFEGELPKILNALHVKLGDQTLVLEVAQEIGEHEVRCIAMDSTDGLV 79

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G +  +       GR++N +G+PID    +        I  + P   ++   
Sbjct: 80  RGAEVADTGAQITVPVGPETLGRILNVIGEPIDEKGPIPTS-RRAPIHRQAPSFEDQAAA 138

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ ++     +         + + VGER
Sbjct: 139 SEILMTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGER 198

Query: 199 GREVREFIEDYLGDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            RE  +   +     +            K  +V    +E P  R    LT +T+AEYF  
Sbjct: 199 TREGNDLYYEMQDAGVIKLGENGSTEGSKVALVFGQMNEPPGARARVALTGLTLAEYFRD 258

Query: 248 K-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+
Sbjct: 259 EENQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGS 316

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD   VLNRS+AE G YP VDPL S SR  D    
Sbjct: 317 ITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRALDPQIV 376

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q      
Sbjct: 377 GQEHYDVACEVQRILQTYKSLQDIIAILGMDELSEDD-KLIVARARRIQRFLSQP---FH 432

Query: 426 SEDVFQEITKKL 437
             +VF     KL
Sbjct: 433 VAEVFTGAPGKL 444


>gi|300789596|ref|YP_003769887.1| F-type H+-transporting ATPase subunit alpha [Amycolatopsis
           mediterranei U32]
 gi|299799110|gb|ADJ49485.1| F-type H+-transporting ATPase subunit alpha [Amycolatopsis
           mediterranei U32]
          Length = 546

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/449 (22%), Positives = 176/449 (39%), Gaps = 28/449 (6%)

Query: 6   ETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E+Y  +        + G +         V  L       + +   G     LG
Sbjct: 9   DEIRSAIENYVSSYAPDVSREEVGVVIDAGDGIAHVEGL-PSAMANELLEFPGG---VLG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G  E I  G  V   G+   +     + GRV+N LG+ IDG   +
Sbjct: 65  VALNLDARSIGAAILGDFESIEEGQQVKRTGQVLSVPVGDGYLGRVVNPLGQAIDGLGDI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              D    +  K    + RQ V +  +TGI  ID  TP+  GQR  +      GK     
Sbjct: 125 ETTD-RRALELKAASVVERQPVSEPLQTGITAIDAMTPIGRGQRQLIIGDRKTGKTAVAV 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
            T+++  A  +  D     + I   VG++G  +    +          + +V A + +S 
Sbjct: 184 DTIINQKANWETGDPKKQVRCIYVAVGQKGSTIAAVKKSLEDSGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    +P  VF 
Sbjct: 244 GFKWIAPYTGSAIGQHWMYEGKHVLIVFDDLTKQADAYRAISLLLRRPPGREAFPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +    ++ +  I  +V SI DG       L   G
Sbjct: 304 LHSRLLERCAKLSDELGAGSLTGLPIIETKANDVSAYIPTNVISITDGQCFFQSDLFNAG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           + P +D   SVSR+   A     K +  SL   + ++ E         +   +D      
Sbjct: 364 QRPAIDVGISVSRVGGAAQVKAMKSVSGSLRIDLSQYRELE---AFAAFASDLDDASKAQ 420

Query: 407 VHQVPIIYDFLKQSP-SDLSSEDVFQEIT 434
           + +   +Y+ LKQ   S +  E+    + 
Sbjct: 421 LERGARLYEVLKQPQYSPIPVEEQVCTVW 449


>gi|257852952|gb|ACV71487.1| ATP synthase beta subunit [Vismia rubescens]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/421 (27%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           GYI+ I      +    + +       VV   K  D LGQ I +  ++        V   
Sbjct: 21  GYITQIIGPVLDIAFPPRKMPNIYNALVV---KGRDTLGQEIHVTCEVQQLLGNNRVRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+PID    L     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDDLG-LIDTRTTSPIHRSP 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+TI
Sbjct: 197 SVFGGVGERTREGNDLYQEMKESGVINQENIAESKVALVYGQMNEPPGARMRVGLTALTI 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +D   I G     +      V +   I  FL Q
Sbjct: 375 LQPKIVGTEHYETAQRVKQTLQRYKELQDTIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|149390275|ref|YP_001294105.1| ATP synthase CF1 beta subunit [Chloranthus spicatus]
 gi|190358279|sp|A6MMC9|ATPB_CHLSC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|146744195|gb|ABQ43267.1| ATP synthase CF1 beta subunit [Chloranthus spicatus]
          Length = 498

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 434


>gi|34500008|gb|AAQ73586.1| ATP synthase beta subunit [Actinobacillus succinogenes]
          Length = 439

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 175/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR++N LG+PID    +G  +
Sbjct: 39  LGGGVVRCIALGTSDGLKRGLAVKNTGNPISVPVGTKTLGRIMNVLGEPIDQKGEIGAEE 98

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  + P   ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 99  -TWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 157

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 158 NIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVALTGL 217

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 218 TMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 275

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR
Sbjct: 276 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSR 335

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +   +  ++ R++E +DI  I       +      V +   I  FL 
Sbjct: 336 QLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILSMDELSEDD-KLVVARARKIERFLS 394

Query: 419 QS 420
           Q 
Sbjct: 395 QP 396


>gi|68139363|gb|AAY86046.1| ATP synthase beta subunit [Cananga odorata]
          Length = 454

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 22  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 81

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 82  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 140

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 141 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVINEQNIA 200

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 201 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQAGSEVSAL 260

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 261 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 318

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 319 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 378

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 379 ILGLDELSEED-RLTVARARKIERFLSQP 406


>gi|292491964|ref|YP_003527403.1| alternate F1F0 ATPase, F1 subunit alpha [Nitrosococcus halophilus
           Nc4]
 gi|291580559|gb|ADE15016.1| alternate F1F0 ATPase, F1 subunit alpha [Nitrosococcus halophilus
           Nc4]
          Length = 503

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 183/424 (43%), Gaps = 14/424 (3%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           + L  +     + + G  + ++     +  L   +   + +   G   + LG  I +  +
Sbjct: 15  SALERNIPALQIRETGTATYVSGGIARIKGL-PGITAEELIAFPG---NLLGIAINLEPE 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            + +  +G   E++ G  V   GR           GRVI+  G+ +D    L   +    
Sbjct: 71  EIGVALLGDSPELTAGAEVHATGRLTDAPVGKGLLGRVIDPTGRVLDDGGPLQVSE-RRP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSD 185
           I    P  M+R  V    +TG++ +D   P+  GQR  +      GK+T+   ++  + D
Sbjct: 130 IERDAPAIMDRAPVSVPLQTGLKAVDALIPIGRGQRELILGDRQTGKTTVAVDTILNQWD 189

Query: 186 CFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
                I   +G+RG  V   I +       + S+VVVA+ ++ P L+ + P  A T+AEY
Sbjct: 190 KEVICIYCAIGQRGTAVARVINELRSQGANRYSIVVVASGEDPPGLQFITPYAATTMAEY 249

Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--PSEK 302
           F  +G +VL++ D +TR A + RE++      P    YP  +F    RLLER      EK
Sbjct: 250 FMEQGQDVLVVYDDLTRHARAYRELSLLLRRPPGREAYPGDIFYIHSRLLERATHLRQEK 309

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+ITA+  V     + +  I  ++ SI DG I L+  L  +G  P VD   SVSR+  
Sbjct: 310 GGGSITALPIVETQAQDISAYIPTNLISITDGQIYLSPELFHKGLMPAVDVGKSVSRVGG 369

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           K      + +   L     +FEE         +   +D    + + +   + + LKQ+  
Sbjct: 370 KTQLPAHRAVAGDLRLSYTQFEELETFAR---FATRLDEATRQTIERGRRVREILKQAEH 426

Query: 423 DLSS 426
           +  S
Sbjct: 427 EPLS 430


>gi|259910316|ref|YP_002650672.1| F0F1 ATP synthase subunit beta [Erwinia pyrifoliae Ep1/96]
 gi|292490160|ref|YP_003533055.1| membrane-bound ATP synthase, F1 sector subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292901162|ref|YP_003540531.1| ATP synthase subunit beta [Erwinia amylovora ATCC 49946]
 gi|224965938|emb|CAX57471.1| ATP synthase, F1 complex, beta subunit [Erwinia pyrifoliae Ep1/96]
 gi|283480439|emb|CAY76355.1| membrane-bound ATP synthase, F1 sector,beta-subunit [Erwinia
           pyrifoliae DSM 12163]
 gi|291201010|emb|CBJ48149.1| ATP synthase beta subunit [Erwinia amylovora ATCC 49946]
 gi|291555602|emb|CBA24220.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
           amylovora CFBP1430]
 gi|312174353|emb|CBX82606.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia
           amylovora ATCC BAA-2158]
          Length = 460

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MATGKIVQVIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGSS 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G + V       +       GR++N LG+PID    +G+ +    I    P   +
Sbjct: 61  DGLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEE-RWAIHRSAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +   +   +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 QSNSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +    
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDT 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  L+ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 358 ARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLSQP 404


>gi|56682985|gb|AAW21824.1| ATP synthase beta subunit [Macrozamia moorei]
          Length = 424

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 166/367 (45%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +     +         K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDISGSKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|63091849|emb|CAH58775.1| ATP synthase alpha chain [Lactobacillus salivarius]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 153/364 (42%), Gaps = 13/364 (3%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGR 104
           G+ V     +    G    +  + V I  +G  + I  GD V   GR   +       GR
Sbjct: 11  GELVEF---DDGTYGMAQNLESNDVGIIILGSFKGIREGDTVKRTGRIMEVPVGEELIGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+PIDG   + K + +  +  K P  M RQ V +  +TG++ ID   P+  GQR 
Sbjct: 68  VVNPLGQPIDGLGEI-KTNKTRPVERKAPGVMERQSVTEPLQTGLKAIDALVPIGRGQRE 126

Query: 165 GVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
            V      GK+   + ++  + D     I   +G++   VR  +E       +  ++VV 
Sbjct: 127 LVIGDRKTGKTSVAIDTIINQKDQDMICIYVAIGQKDSTVRTSVETLRKFGAMDYTIVVS 186

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A       L  +AP     + E F   G +VL++ D +++ A + RE++      P    
Sbjct: 187 AGPSSPAPLLYLAPYAGAAMGEEFMFNGKHVLIVYDDLSKQADAYRELSLILRRPPGREA 246

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E   G++TA+  +     + +  I  +V SI DG I L+
Sbjct: 247 YPGDVFYLHSRLLERAAKLSDELGGGSMTALPFIETKAGDVSAYIPTNVISITDGQIFLD 306

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
                 G  P +D   SVSR+   A     KK+  +L   +  + E       G     +
Sbjct: 307 SDRFYSGIRPAIDAGTSVSRVGGNAQVKAMKKVAGTLRTDLASYSELESFAQFG---SDL 363

Query: 400 DLIL 403
           D   
Sbjct: 364 DEAT 367


>gi|5001579|gb|AAD37036.1|AF092110_1 ATP synthase beta subunit [Buxus sempervirens]
          Length = 479

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 2   GRIXQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|269114800|ref|YP_003302563.1| ATP synthase subunit beta [Mycoplasma hominis]
 gi|268322425|emb|CAX37160.1| ATP synthase beta chain [Mycoplasma hominis ATCC 23114]
          Length = 495

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 119/433 (27%), Positives = 191/433 (44%), Gaps = 22/433 (5%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTV---TCLSQYV-----CLGDFVVHQGK 54
           +N E   +             G IS I      V      +  +      + +      +
Sbjct: 8   ENQEIQEEQNPVDESKNSENYGVISKILGSVIDVRFEEGHTPKILNALKIIDEDKKFSNE 67

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI 113
               + Q +    D V    + +   +  G  V   G   +         R+ N LG+PI
Sbjct: 68  QILEVAQHVG--NDTVRTIAMNLTIGLKRGMKVLDLGSPIKAPVGKEVLSRMFNVLGEPI 125

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           D    + K    M I    P    ++   + F+TGI+VID+  P   G +IG+F G+G+G
Sbjct: 126 DQKGGVFKHK--MPIHRAAPSYEEQKSTLEIFETGIKVIDLLVPYIKGGKIGLFGGAGVG 183

Query: 174 KSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPI 229
           K+ L+     +         + + VGER RE  +   +     + +K+ +V    +E P 
Sbjct: 184 KTVLIQELINNIAKQHGGLSVFAGVGERTREGNDLYHEMQASGVLEKTALVFGQMNEPPG 243

Query: 230 LRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R  AP TA+TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  
Sbjct: 244 ARMRAPFTALTIAEYFRDVMHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLAV 303

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           E+ +L ERI  +    G+IT+V +V V  D+  DP   +  + LD   VL+R +A  G Y
Sbjct: 304 EMGQLQERI--TSTNNGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVLDRDIAALGIY 361

Query: 349 PPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P +DPLAS SR+ D      +      ++ +++ RF+E +DI  I G     +    K V
Sbjct: 362 PAIDPLASSSRMVDPNIIGLEHYNTARAVQNILQRFKELQDIIAILGMHELSEED-KKVV 420

Query: 408 HQVPIIYDFLKQS 420
            +   I +FL Q 
Sbjct: 421 ARARRIRNFLSQP 433


>gi|156530093|gb|ABU75143.1| AtpB [Cneorum tricoccon]
          Length = 480

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K+ D +GQ I +  ++        V   
Sbjct: 3   GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTVGQPINVTCEVQQLLGNNRVRAV 59

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 60  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIXKSA 118

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 119 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 178

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 179 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRXGLTALTM 238

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 239 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 296

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 297 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 356

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 357 LQPRIVGEDHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 415

Query: 420 S 420
            
Sbjct: 416 P 416


>gi|13236770|gb|AAK14690.1| ATP synthase beta subunit [Howea belmoreana]
          Length = 498

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|29565615|ref|NP_817194.1| ATP synthase CF1 beta subunit [Pinus koraiensis]
 gi|75328468|sp|Q85X24|ATPB_PINKO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|29469714|gb|AAO74042.1| H+-ATPase beta subunit [Pinus koraiensis]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V+    Y+  + + +  QG+ +   GQ I++  ++        V    
Sbjct: 19  GYIAQIIGPVLDVSFSPGYMPNIYNSLKVQGQGTA--GQEIQVTCEVQQLLGNHKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 77  MSATDGLTRGMTVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARITSPIHRTAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 432


>gi|62902871|gb|AAY19350.1| ATP synthase beta subunit [Larrea tridentata]
          Length = 474

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I  I      V     +   + + +V Q  N+     D   +V ++  +  V    + 
Sbjct: 3   GHIVQIIGPVLDVAFPPGKMPKIYNALVVQSANTVGQQIDVTCEVQQLLGNNRVRTVAMS 62

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 63  ATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHKSAPAF 121

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 122 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 181

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 182 GGVGERTREGNDLYMEMKESGVINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 241

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 242 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 299

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 300 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 359

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 RIVGEEHYETAQQVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|25808441|gb|AAN74347.1| ATP synthase F1 alpha subunit [Helicobacter pylori]
          Length = 336

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 7/336 (2%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G    +  D V +   G G  I  G  V       ++       GRV+NALG+PIDG   
Sbjct: 1   GVAANLEEDSVGVIVFGFGNNIKEGTSVKRTKSLMKVPVGDAVVGRVLNALGEPIDGKGE 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   + S+ I  K P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+T+ 
Sbjct: 61  IETNEFSL-IEQKAPGIMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDKQTGKTTVA 119

Query: 179 SMFARSDCFDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     VI     +G++   V + +           SVV+ A++ +S  ++ +AP
Sbjct: 120 IDAIINQKGQNVICIYVAIGQKESTVAQVVRKLEEYGAMEYSVVINASASDSAAMQYLAP 179

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            + V + EYF     + L+I D +++ A + REI+      P    +P  VF    RLLE
Sbjct: 180 YSGVAMGEYFRDHARHALIIYDDLSKHAVAYREISLILRRPPGREAFPGDVFYIHSRLLE 239

Query: 296 RIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      EK  G++TA+  V     + +  I  ++ SI DG I L   L   G  P ++ 
Sbjct: 240 RAAKLCDEKGAGSLTALPIVETQAGDVSAYIPTNIISITDGQIFLETDLFYSGIRPAINV 299

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
             SVSR+   A     K++  +L   + ++ E +  
Sbjct: 300 GLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQAF 335


>gi|262363809|gb|ACY60530.1| ATP synthase beta subunit protein [Yersinia pestis D106004]
 gi|262367745|gb|ACY64302.1| ATP synthase beta subunit protein [Yersinia pestis D182038]
          Length = 435

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG+PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|224830486|gb|ACN66338.1| ATP synthase beta chain [Arcangelisia flava]
          Length = 489

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVXXXTTS-PIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAXRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|157285141|gb|ABV31310.1| ATPase [Vibrio coralliilyticus]
 gi|157285161|gb|ABV31320.1| ATPase [Vibrio coralliilyticus]
 gi|157285197|gb|ABV31338.1| ATPase [Vibrio coralliilyticus]
 gi|157285199|gb|ABV31339.1| ATPase [Vibrio coralliilyticus]
 gi|157285201|gb|ABV31340.1| ATPase [Vibrio coralliilyticus]
 gi|157285205|gb|ABV31342.1| ATPase [Vibrio coralliilyticus]
          Length = 441

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSAEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|65332608|gb|AAY42228.1| ATP synthase beta subunit [Anisophyllea obtusifolia]
          Length = 473

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +++G  V   G    +       GR
Sbjct: 26  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTIGMEVIDTGAPLSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P D    +     +  I    P  +        F+TGI+V+D+  P   G ++
Sbjct: 86  IFNVLGEPXDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGGKV 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKZTLQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLIVARARKIERFLSQP 410


>gi|124361744|gb|ABN09314.1| ATP synthase beta subunit [Diospyros tetrasperma]
          Length = 463

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       +V   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLIV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIIGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|62902831|gb|AAY19330.1| ATP synthase beta subunit [Peripterygia marginata]
          Length = 485

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 9   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V        +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLMRGMDVIDTEAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|297202401|ref|ZP_06919798.1| ATP synthase F1, alpha subunit [Streptomyces sviceus ATCC 29083]
 gi|197710078|gb|EDY54112.1| ATP synthase F1, alpha subunit [Streptomyces sviceus ATCC 29083]
          Length = 529

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 91/447 (20%), Positives = 171/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGCVILGEFSGIEEGQPVTRTGEVLSVAVGEGYLGRVVDPLGAPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 SGRRALELQAPGVMARKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + +   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDPKKQVRCVYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKAQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ+    +++ED    +  
Sbjct: 425 GQRMVELLKQAQYQPMATEDQVVSVWA 451


>gi|157285265|gb|ABV31372.1| ATPase [Enterovibrio coralii]
 gi|157285313|gb|ABV31396.1| ATPase [Enterovibrio coralii]
          Length = 441

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 178/418 (42%), Gaps = 27/418 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+     G+ +   G   +     + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-AMQGEMIELPG---NRYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  + RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPINAA-LTSPVEVIAPGVIARQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + +     I   +G++   +   +  
Sbjct: 116 AVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               D LK ++VVVA++ E+  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHDALKNTIVVVASASEAAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVNATYVEKFTNGEVTGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNSGIRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            +   + ++ E   +     +   +D    K ++    + + +KQ     +   VF++
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLNHGQKVTELMKQKQ--YAPMSVFEQ 408


>gi|312285215|gb|ADQ64349.1| ATP synthase beta subunit [Cocculus orbiculatus]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|238023073|ref|ZP_04603499.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147]
 gi|237865456|gb|EEP66596.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147]
          Length = 465

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + +  G  V + G    +       GR+++ LGKP+D   ++    
Sbjct: 45  LGDGIVRTIAMGATDGLKRGYAVENTGAPITVPVGTATLGRIVDVLGKPVDEAGAIDAS- 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 HTRAIHQIAPKFDELSSATELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVL------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           T+AEYF  + D           +D+I R+  +  E++   G +P A GY  ++  E+ RL
Sbjct: 224 TMAEYFRDEKDETGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 283

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDP
Sbjct: 284 QERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDP 341

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR  D      +   +   +   + +++E RDI  I G     D      V +   
Sbjct: 342 LDSTSRQLDPMVLGQEHYDVARGVQATLQKYKELRDIIAILGMDELSDED-KLTVARARK 400

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 401 IQRFLSQP 408


>gi|7708674|emb|CAB90012.1| ATP synthase beta subunit [Tetracera asiatica]
          Length = 483

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/388 (27%), Positives = 167/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + +  G  V        +       GR+
Sbjct: 49  GRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTEAPLSVPVGGATLGRI 108

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+PID    +     +  I    P           F TGI+V+D+  P   G +IG
Sbjct: 109 FNVLGEPIDNLGPVD-TRTTSPIHRSAPAFXQLDTKLSIFDTGIKVVDLLAPYRRGGKIG 167

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 168 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 227

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 228 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 287

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD
Sbjct: 288 GRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLD 345

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 346 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 405

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 406 LGLDELSEED-RLTVARARKIERFLSQP 432


>gi|37729418|gb|AAN71675.1| ATP synthase beta subunit [Fagus grandifolia]
          Length = 472

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ + +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQMNVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 364

Query: 362 DKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIXGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|119355899|ref|YP_910543.1| F0F1 ATP synthase subunit beta [Chlorobium phaeobacteroides DSM
           266]
 gi|166201696|sp|A1BCJ2|ATPB_CHLPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|119353248|gb|ABL64119.1| ATP synthase F1 subcomplex beta subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 462

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/428 (27%), Positives = 193/428 (45%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +     +   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGQLPSILDALTITRPDGTKL--VLETQQHLGEERVRTVAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V +  R  ++       GR++N +G PIDG  S+     +  I    P 
Sbjct: 59  ESTDGLIRGLSVTNTERPIQVPVGPEVLGRMLNVVGDPIDGRGSVHTSK-TYSIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVI 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         +
Sbjct: 118 FDELSTKTEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-G 249
            + VGER RE  +   + +    + K+ +V    +E P  R    LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEN 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI     +KG++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRI--VSTKKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  ++ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYDTAQAVKQILQRYKDLQDIIAILGMDELSDED-KLVVSRARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|221128055|ref|XP_002155577.1| PREDICTED: similar to ATP synthase beta subunit [Hydra
           magnipapillata]
 gi|260222684|emb|CBA32489.1| ATP synthase subunit beta 1 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 471

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 186/418 (44%), Gaps = 18/418 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
             N  VQG  +  I +V        +   + D +  +G       Q  ++   IV    +
Sbjct: 3   QANSQVQGKIVQCIGAVVDVEFPRDKMPGIYDALKMEGSTLTLEVQ-QQLGDGIVRTIAL 61

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G +V +  +   +       GR+++ LG PID    +   +L+  I  K P 
Sbjct: 62  GSSDGLRRGMIVSNTEKPIMVPVGQATLGRIMDVLGAPIDERGPV-ASELTASIHRKAPT 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                  ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         +
Sbjct: 121 YDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSV 180

Query: 192 ISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +F  +               K  +V    +E P  R    LT +TIAE
Sbjct: 181 FAGVGERTREGNDFYHEMADSGVVNLEDLPKSKVAMVYGQMNEPPGNRLRVALTGLTIAE 240

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  +
Sbjct: 241 SFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D 
Sbjct: 299 VGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      ++   + R++E RDI  I G    +       V +   I  FL Q 
Sbjct: 359 NVVGEEHYNTARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLTVARARKIQRFLSQP 415


>gi|113910802|gb|ABI48133.1| ATPase beta subunit [Tylimanthus saccatus]
          Length = 456

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 18  GQEIDVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYEIAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|119715996|ref|YP_922961.1| F0F1 ATP synthase subunit alpha [Nocardioides sp. JS614]
 gi|158513100|sp|A1SHI9|ATPA_NOCSJ RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|119536657|gb|ABL81274.1| ATP synthase F1 subcomplex alpha subunit [Nocardioides sp. JS614]
          Length = 547

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 94/428 (21%), Positives = 175/428 (40%), Gaps = 23/428 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G ++        V+ L       + +  +      +G  + ++   + +  +G  E I
Sbjct: 31  EVGTVAQAGDGIARVSGL-PSAMANELLEFEDG---TMGLALNLDTREIGVVILGDFEGI 86

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV++ LGKPIDG   + + +    +  + P  M R+ 
Sbjct: 87  EEGQTVRRTGEILSVPVGDNFMGRVVDPLGKPIDGLGEI-EAETRRALELQAPTVMQRKS 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +   TGI+ ID  TP+  GQR  +      GK      T+++     +  D     + 
Sbjct: 146 VHEPLATGIKAIDSMTPIGRGQRQLIIGDRATGKTTIAIDTIINQKQNWESGDPAKQVRC 205

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +             + + +V + + +S   + +AP T   I +++   G
Sbjct: 206 IYVAIGQKGSTIASVRGALEEAGALEYTTIVASPASDSAGFKYLAPYTGSAIGQHWMYDG 265

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG--NI 307
            +VL+I D +T+ A + R ++      P    YP  VF    RLLER      + G  ++
Sbjct: 266 KHVLIIFDDLTKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDDMGAGSM 325

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +    ++ +  I  +V SI DG I L   L    + P +D   SVSR+   A + 
Sbjct: 326 TGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFASNQRPAIDVGVSVSRVGGSAMTK 385

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLSS 426
             K +  SL   + +F   R +     +   +D    + + +   +   LKQ   S    
Sbjct: 386 AMKAVTGSLKVDLAQF---RAMEAFAMFASDLDAASRQQLDRGQRLMALLKQPAYSPYPV 442

Query: 427 EDVFQEIT 434
           E++   + 
Sbjct: 443 EEMTVSLW 450


>gi|312285273|gb|ADQ64378.1| ATP synthase beta subunit [Syntriandrium preussii]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D  GQ I +  ++        V    +   + 
Sbjct: 4   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQHINVTCEVQQLLGNNRVRAVAMSATDG 61

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P  +   
Sbjct: 62  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAPAFIQLD 120

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 121 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 180

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 181 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 240

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 241 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 299 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 358

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|210135291|ref|YP_002301730.1| F0F1 ATP synthase subunit beta [Helicobacter pylori P12]
 gi|226740207|sp|B6JMX2|ATPB_HELP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|210133259|gb|ACJ08250.1| ATP synthase F1 subunit beta [Helicobacter pylori P12]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQVVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 VATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 410


>gi|157285171|gb|ABV31325.1| ATPase [Vibrio cholerae]
 gi|157285267|gb|ABV31373.1| ATPase [Vibrio cholerae]
 gi|157285269|gb|ABV31374.1| ATPase [Vibrio cholerae]
 gi|157285271|gb|ABV31375.1| ATPase [Vibrio cholerae]
 gi|157285273|gb|ABV31376.1| ATPase [Vibrio cholerae]
 gi|157285275|gb|ABV31377.1| ATPase [Vibrio cholerae]
 gi|157285277|gb|ABV31378.1| ATPase [Vibrio cholerae]
 gi|157285279|gb|ABV31379.1| ATPase [Vibrio cholerae]
 gi|157285281|gb|ABV31380.1| ATPase [Vibrio cholerae]
          Length = 441

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G   +     + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPG---NRYALALNLERDSVGAVVMGPYADLREGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +G    +  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPIG-AKQTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  K ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALKNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|56682987|gb|AAW21825.1| ATP synthase beta subunit [Microcycas calocoma]
          Length = 424

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 165/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDISRSKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|18140083|gb|AAL60251.1|AF459637_1 putative EscN [Escherichia coli]
          Length = 446

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 156/409 (38%), Positives = 229/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I +I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKIINIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHVSG 88

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P++ + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPMESNIAAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            ++  F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDPPFILGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPGLERMKAAFTATTIAEYFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERSGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+    +I +F++QS  D+SS +
Sbjct: 387 IATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYE 435


>gi|21633285|gb|AAM52117.1| ATP synthase beta subunit [Turbina oblongata]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|223932788|ref|ZP_03624785.1| ATP synthase F1, beta subunit [Streptococcus suis 89/1591]
 gi|253751912|ref|YP_003025053.1| ATP synthase beta chain [Streptococcus suis SC84]
 gi|253753735|ref|YP_003026876.1| ATP synthase beta chain [Streptococcus suis P1/7]
 gi|253755387|ref|YP_003028527.1| ATP synthase beta chain [Streptococcus suis BM407]
 gi|302023926|ref|ZP_07249137.1| F0F1 ATP synthase subunit beta [Streptococcus suis 05HAS68]
 gi|330832977|ref|YP_004401802.1| F0F1 ATP synthase subunit beta [Streptococcus suis ST3]
 gi|190358731|sp|A4W1V7|ATPB_STRS2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358732|sp|A4VVJ9|ATPB_STRSY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|223898497|gb|EEF64861.1| ATP synthase F1, beta subunit [Streptococcus suis 89/1591]
 gi|251816201|emb|CAZ51828.1| ATP synthase beta chain [Streptococcus suis SC84]
 gi|251817851|emb|CAZ55604.1| ATP synthase beta chain [Streptococcus suis BM407]
 gi|251819981|emb|CAR46125.1| ATP synthase beta chain [Streptococcus suis P1/7]
 gi|319758273|gb|ADV70215.1| F0F1 ATP synthase subunit beta [Streptococcus suis JS14]
 gi|329307200|gb|AEB81616.1| F0F1 ATP synthase subunit beta [Streptococcus suis ST3]
          Length = 468

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/414 (28%), Positives = 193/414 (46%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSD---NLGQVIRINLDIVYIC 73
           +  G I+ +      V   ++   L +     VV++  +S     L   + +   +V   
Sbjct: 1   MSSGKITQVVGPVVDVAFAAED-KLPEINNALVVYKNDDSKQKVVLEVALELGDGVVRTI 59

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   GR   +       GRV N LG  ID ++S         I  K 
Sbjct: 60  AMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEESFPADFEREPIHKKA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   I
Sbjct: 120 PAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGI 179

Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           S+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF   
Sbjct: 180 SVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDV 239

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++
Sbjct: 240 EGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSV 297

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWS 366
           T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +   
Sbjct: 298 TSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQLGIYPAVDPLASSSRALAPQIVG 357

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++ R++E +DI  I G     D      V +   I  FL Q+
Sbjct: 358 EEHYAVAMEVKRVLQRYQELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|312285221|gb|ADQ64352.1| ATP synthase beta subunit [Diploclisia glaucescens]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|312285195|gb|ADQ64339.1| ATP synthase beta subunit [Aspidocarya uvifera]
 gi|312285223|gb|ADQ64353.1| ATP synthase beta subunit [Disciphania killipii]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|229000091|ref|ZP_04159661.1| ATP synthase subunit beta [Bacillus mycoides Rock3-17]
 gi|229007611|ref|ZP_04165205.1| ATP synthase subunit beta [Bacillus mycoides Rock1-4]
 gi|228753622|gb|EEM03066.1| ATP synthase subunit beta [Bacillus mycoides Rock1-4]
 gi|228759628|gb|EEM08604.1| ATP synthase subunit beta [Bacillus mycoides Rock3-17]
          Length = 455

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 35  ALHLGDDTVRTVAMSSTDGLVRGTAVEDTGKAISVPVGDATLGRVFNVLGDAIDLDGEVP 94

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 95  ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 154

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 155 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 214

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 215 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 274

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 275 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 332

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      V +   I 
Sbjct: 333 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDEISEED-KLVVQRARRIQ 391

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 392 FFLSQN 397


>gi|189314215|gb|ACD89007.1| ATP synthase beta subunit [Coscinium blumeanum]
 gi|312285183|gb|ADQ64333.1| ATP synthase beta subunit [Anamirta cocculus]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|7708652|emb|CAB90011.1| ATP synthase beta subunit [Spathiphyllum wallisii]
          Length = 491

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V         + + +V +G+++         +V ++  +  V    + 
Sbjct: 20  GRIXQIIGPVLDVAFPPGXXPYIYNALVVKGRDTXXQEIKVTCEVQQLLGNNRVRAVAMS 79

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 80  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 138

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 139 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 198

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 199 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 258

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 259 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 316

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 317 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 376

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 377 RIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|75336372|sp|Q9MRF3|ATPB_IDIAU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687986|emb|CAB89714.1| ATP synthase beta subunit [Idiospermum australiense]
          Length = 498

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVACEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 434


>gi|4063530|gb|AAC98323.1| ATP synthase beta subunit [Bixa orellana]
          Length = 456

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVLDTGAPLSVPVGGTTLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQIVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|312285201|gb|ADQ64342.1| ATP synthase beta subunit [Calycocarpum lyonii]
 gi|312285213|gb|ADQ64348.1| ATP synthase beta subunit [Cocculus carolinus]
 gi|312285227|gb|ADQ64355.1| ATP synthase beta subunit [Hyperbaena domingensis]
 gi|312285261|gb|ADQ64372.1| ATP synthase beta subunit [Sarcopetalum harveyanum]
 gi|312285269|gb|ADQ64376.1| ATP synthase beta subunit [Stephania longa]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|315453781|ref|YP_004074051.1| flagellum-specific ATP synthase [Helicobacter felis ATCC 49179]
 gi|315132833|emb|CBY83461.1| flagellum-specific ATP synthase [Helicobacter felis ATCC 49179]
          Length = 436

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 158/438 (36%), Positives = 239/438 (54%), Gaps = 8/438 (1%)

Query: 4   NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQV 62
           +LE+L    +   ++L  + G +  I      V      V  GD V V +G   + LG V
Sbjct: 2   SLESLKARLQLV-RDLSPRYGMVCKILPNMVFVQGFLPSV--GDVVKVERGDGKECLGMV 58

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + +        P    E   +GD V                GRV++ LG P+D    + +
Sbjct: 59  VVVEQTQFGFAPFSFVEGCKVGDRVLFVKEGLSFPVGEGLLGRVLDPLGNPLDELGFV-R 117

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 +M +    ++R  +++ F  G++ ID       GQ++G+FAGSG+GKSTL+ M 
Sbjct: 118 ASAFAPVMVEPMKPLDRGVIDEPFGVGVKSIDALLTCGKGQKLGIFAGSGVGKSTLMGMV 177

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241
            R       +I+L+GERGRE+ EFI   L  NL  +V+VVATSD+SP++RK     A+++
Sbjct: 178 VRGCSAPIKVIALIGERGREIPEFIHKNLQGNLDNTVLVVATSDDSPLMRKYGAFCAMSV 237

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AEYF ++G +VL ++DSITRFA + REI    GE P ++GYP S  + LP+L+ER G  E
Sbjct: 238 AEYFKNQGHDVLFMMDSITRFAMAQREIGLAMGEPPTSKGYPPSALTLLPQLMERAGK-E 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
           K KG+ITA  +VLV+GD+ +DPIAD  RSILDGHIVL+R L + G YPP++ L S SR++
Sbjct: 297 KNKGSITAFFTVLVEGDDLSDPIADQARSILDGHIVLSRELTDHGIYPPINILNSASRVS 356

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +  + +          L    +E   +  IG Y+PG D  LD+A+ +   +  F+ Q  
Sbjct: 357 KEVSATEHMLAARKFRKLHALLKENEVLIRIGSYQPGFDADLDEAIAKKAGMEAFMLQEE 416

Query: 422 SD-LSSEDVFQEITKKLQ 438
            + + S    Q++   +Q
Sbjct: 417 EEIVPSNTSIQQLIALMQ 434


>gi|307128540|ref|YP_003880570.1| ATP synthase F1 subunit alpha [Candidatus Sulcia muelleri CARI]
 gi|306483002|gb|ADM89872.1| ATP synthase F1, alpha subunit [Candidatus Sulcia muelleri CARI]
          Length = 528

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/421 (23%), Positives = 168/421 (39%), Gaps = 36/421 (8%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L+  +  G+ V  + K     G V+ +  + V I  +   + I  GD V   
Sbjct: 37  DGVANVYGLNNAI-YGEIVEFENK---IKGIVLNLEEENVGILLIENFKGIKEGDKVIRT 92

Query: 91  GRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G    I+      GRVIN+LG PIDG   +      M +  K P  + R+ V +  +TGI
Sbjct: 93  GMIFSINVGEGMLGRVINSLGVPIDGKGPISGEVFLMPLERKAPGVIFREPVIEPLQTGI 152

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVIISLVGERGREV 202
           + ID   P+  GQR  +      GK+T+      +             I   +G++   +
Sbjct: 153 KCIDSMIPIGRGQRELIIGDRQTGKTTIAIDTIINQKKFNDMGKTVYCIYVSIGQKASTL 212

Query: 203 REFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
              ++     D L  +V++ A + +S  ++  AP +   I E+F   G + L+I D +++
Sbjct: 213 ASIVKLLEKNDALSYTVILTANASDSAAMQVFAPFSGTAIGEFFRDTGRSSLIIYDDLSK 272

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE------------------ 303
            A + REI+      P    YP  +F    RLLER      +                  
Sbjct: 273 QAVAYREISLLLRRPPGREAYPGDIFYLHSRLLERSSKIISDNKVASQMNDIPKSIKTKI 332

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++T++  +     + +  I  +V SI DG I L  +L   G  P ++   SVSR+ 
Sbjct: 333 LGGGSLTSLPIIETQSGDVSSYIPTNVISITDGQIFLETNLFNSGIRPAINEGISVSRVG 392

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     KK+  +      +F E         +   +D I    + +     + LKQS 
Sbjct: 393 ASAQIKSMKKISGTFKLDQAQFRELE---SFSQFGSDLDFITKNIIEKGKRNIEILKQSI 449

Query: 422 S 422
           +
Sbjct: 450 N 450


>gi|306833169|ref|ZP_07466299.1| ATP synthase F1 sector beta subunit [Streptococcus bovis ATCC
           700338]
 gi|304424743|gb|EFM27879.1| ATP synthase F1 sector beta subunit [Streptococcus bovis ATCC
           700338]
          Length = 468

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 114/413 (27%), Positives = 196/413 (47%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLDI----VYICP 74
           +  G I+ +      V   +  +   + + ++    +  +   V+ + L++    V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFAAGEKLPEINNALIVYKDSDKSQKIVLEVALELGDGLVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  VF  GR   +       GRV N LG+ ID D+   +      I  K P
Sbjct: 61  MESTDGLTRGLEVFDTGRAISVPVGKETLGRVFNVLGETIDLDEPFAEDAPREPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 AFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQ 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYEVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|157285247|gb|ABV31363.1| ATPase [Vibrio rotiferianus]
          Length = 424

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|157850696|gb|ABV90188.1| ATP synthase alpha chain [Enterococcus casseliflavus]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + + D S  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGPI-ETDKSRPVEAAAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+T+      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTTIAIDAIINQKGQDMICIYVAIGQKDSTVRAQVETLRR 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPLLYIAPYAGAAVGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYSGVRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|62085120|gb|AAX62966.1| ATP synthase beta subunit [Ctenolophon englerianus]
          Length = 482

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQISVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 64  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPV-ETRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|255320598|ref|ZP_05361775.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82]
 gi|262380769|ref|ZP_06073922.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164]
 gi|255302214|gb|EET81454.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82]
 gi|262297717|gb|EEY85633.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164]
          Length = 464

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/430 (26%), Positives = 190/430 (44%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR+++ LG+PID    +   +  + I  + P    +
Sbjct: 60  GLKRGLPVTNSGAPISVPVGTACLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 AASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGK 238

Query: 254 -----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
                L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQ 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +  ++  S+ +++ R++E +DI  I G     +      V++   I  F  Q        
Sbjct: 357 EHYEIARSVQNVLQRYKELKDIIAILGMDELAEED-KLVVYRARKIQRFFSQP---FHVA 412

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 413 EVFTGAPGKL 422


>gi|158602249|gb|ABW74591.1| ATP synthase beta subunit [Anemone canadensis]
          Length = 474

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 26  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLTVARARKIERFLSQP 410


>gi|21633275|gb|AAM52112.1| ATP synthase beta subunit [Turbina corymbosa]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|9799476|gb|AAF98988.1| ATP synthase beta subunit [Aphanopetalum resinosum]
          Length = 483

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +     ++ G  V   G    +       GR
Sbjct: 38  KGRDTTGQQINVTCEVQQLLGNNRVRAIAMSATNGLTRGMEVIDTGAPLSVPVGGVTLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|14717964|gb|AAK72724.1| ATP synthase beta subunit [Behnia reticulata]
          Length = 484

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 183/412 (44%), Gaps = 24/412 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIGEEIS 82
           I  V   V    +   + + +V +G+++     +   +V ++  +  V    +   + ++
Sbjct: 25  IGPVLDVVFPPGKMPNIYNALVVKGRDTVXQQINVTCEVQQLLGNNRVRAVAMSATDGLT 84

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +     +  I    P  +     
Sbjct: 85  RGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTK 143

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   ER
Sbjct: 144 LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGER 203

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 204 TREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNE 263

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 264 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMVSLQERI--TSTKEGSITS 321

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        +
Sbjct: 322 IPAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEE 381

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 382 HYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|189314207|gb|ACD89003.1| ATP synthase beta subunit [Fibraurea chloroleuca]
 gi|312285199|gb|ADQ64341.1| ATP synthase beta subunit [Burasaia madagascariensis]
 gi|312285253|gb|ADQ64368.1| ATP synthase beta subunit [Penianthus longifolius]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|45657126|ref|YP_001212.1| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|294828180|ref|NP_712957.2| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar Lai
           str. 56601]
 gi|81568536|sp|Q72SX9|ATPB_LEPIC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|302393678|sp|Q8F2J5|ATPB_LEPIN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|45600364|gb|AAS69849.1| ATP synthase beta chain [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|293386027|gb|AAN49975.2| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 189/410 (46%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQ----GKNSDNLGQVIR-INLDIVYICPVGI 77
           G I  I      +     +   + + +  +    GK    + +V   I    V    +  
Sbjct: 4   GKIKQIIGSVLDIEFENGELPEIYNALEIETNVSGKKETIIAEVQTHIGGKAVRAIALSS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G+   +       GR+ N LGK ID   ++     +  I    P   
Sbjct: 64  TDGLIRGQEVSNTGKPISVPVGDATLGRIFNVLGKTIDEGPAI-TVKETRPIHRAAPSFD 122

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         + +
Sbjct: 123 ELTSKTEVFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFA 182

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +      + K+V+     +E P  R    L+A+T+AE+F    G +
Sbjct: 183 GVGERTREGNDLWREMKESGVIDKTVLCYGQMNEPPGARLRVALSALTMAEHFRDSIGTD 242

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V 
Sbjct: 243 VLLFVDNIFRFSQAGSEVSALLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITSVQ 300

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           ++ V  D+  DP   +  + LD   VL+R+++++G YP VDPL S SR+ +     +E  
Sbjct: 301 AIYVPADDLTDPAPANAFAHLDATTVLSRAISDKGIYPAVDPLDSTSRVMNAQVLGEEHY 360

Query: 372 -LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R+++ +DI  I G     +      V +   I  FL Q 
Sbjct: 361 LVAREVQRILQRYKDLQDIIAILGMDELSEDD-KVLVARARKIEKFLSQP 409


>gi|183206658|gb|ACC54527.1| ATP synthase beta subunit [Legousia hybrida]
          Length = 497

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 20  GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDALGQPINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+ ID    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGETIDNLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYKEMKDSGVINEEKFAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLXSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRVVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|110915606|gb|ABH02591.1| ATP synthase beta subunit [Calamagrostis canadensis]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVXVGGATLGRIFNVLGEPVDNLGPVDSS-ATFPIHRXAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110915680|gb|ABH02628.1| ATP synthase beta subunit [Poa alpina]
          Length = 471

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 33  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 92

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 93  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 151

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 152 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 211

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 212 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 271

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 272 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLXDPAPATTFAHLDATTVLSRGL 329

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 330 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 389

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 390 D-RLTVARARKIERFLSQP 407


>gi|157285211|gb|ABV31345.1| ATPase [Vibrio fortis]
 gi|157285231|gb|ABV31355.1| ATPase [Listonella pelagia]
 gi|157285239|gb|ABV31359.1| ATPase [Vibrio fortis]
 gi|157285305|gb|ABV31392.1| ATPase [Vibrio fortis]
          Length = 440

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 178/420 (42%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLTD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALENTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|42559042|gb|AAS20207.1| ATP synthase beta subunit [Alstroemeria aurea]
          Length = 489

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNITDSKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718242|gb|AAK72859.1| ATP synthase beta subunit [Tapiscia sinensis]
          Length = 472

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVDFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|4063560|gb|AAC98338.1| ATP synthase beta subunit [Rhus copallina]
          Length = 456

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V + G    +       G+
Sbjct: 24  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVINTGAPLSVPVGGATLGQ 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|312285259|gb|ADQ64371.1| ATP synthase beta subunit [Rhigiocarya racemifera]
          Length = 468

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D  GQ I +  ++        V    +   + 
Sbjct: 4   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVAMSATDG 61

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P  +   
Sbjct: 62  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAPAFIQLD 120

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 121 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 180

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 181 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 240

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 241 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 299 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 358

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|289743389|gb|ADD20442.1| F0F1-type ATP synthase beta subunit [Glossina morsitans morsitans]
          Length = 507

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/386 (28%), Positives = 180/386 (46%), Gaps = 20/386 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V   G   RI   A   GR+IN +G+PID    +   D
Sbjct: 82  LGENVVRTIAMDGTEGLVRGQKVLDTGFPIRIPVGAETLGRIINVIGEPIDERGPV-PTD 140

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 141 KRAPIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 200

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D   K  +V    +E P  R  
Sbjct: 201 NVAKAHGGYSVFAGVGERTREGNDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARAR 260

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 261 VALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGS 320

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VD
Sbjct: 321 MQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVD 378

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +   +   +  ++  ++  +DI  I G     +      V +  
Sbjct: 379 PLDSTSRIMDPNIIGHEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARAR 437

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL Q        +VF     KL
Sbjct: 438 KIQRFLSQP---FQVAEVFTGHAGKL 460


>gi|155029327|dbj|BAF75547.1| ATP synthase beta subunit [Wetria insignis]
          Length = 489

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        +    
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRIRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGESVDELGPVD-TRATSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|154424943|emb|CAL18574.1| ATP synthase alpha subunit [Streptococcus hyointestinalis]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 157/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G   EI  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---VYGMAQNLESNDVGIIILGDFSEIREGDEVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   + K  ++  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGEI-KTTVTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|15375070|gb|AAK94782.1| ATP synthase beta subunit [Micranthes integrifolia]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGPQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|4063524|gb|AAC98320.1| ATP synthase beta subunit [Aesculus pavia]
          Length = 456

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/388 (26%), Positives = 170/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 25  GRDTVGQPINVACEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 144 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAE 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +V+L +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVILFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 322 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAI 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKIERFLSQP 408


>gi|66276291|gb|AAY44160.1| ATP synthase beta subunit [Schizopepon bryoniifolius]
          Length = 481

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 182/422 (43%), Gaps = 29/422 (6%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYI 72
             G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V  
Sbjct: 3   HSGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTTGQEINVTCEVQQLLGNNRVRA 60

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V        +       GR+ N LG+PID    +     +  I   
Sbjct: 61  VAMSATDGLMRGLEVIDTKAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRS 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 120 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 179

Query: 192 ISLVGERGREVREFIEDYLGDNLK-----------KSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G  G   RE  + Y G               K  +V    +E P  R    LTA+T
Sbjct: 180 VSVFGGVGERTREGNDLYTGMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALT 239

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 240 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 297

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 298 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 357

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 358 MLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLS 416

Query: 419 QS 420
           Q 
Sbjct: 417 QP 418


>gi|24460025|dbj|BAC22613.1| F1-ATPase beta subunit [Synechococcus sp. PCC 7002]
          Length = 483

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I          S  +  + + +  QGKN    GQ I +  ++        V    
Sbjct: 10  GKITQIIGPVIDAEFPSGKMPRIYNALKIQGKNP--YGQEINLTCEVQQLLGDNQVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  +   G    +       GR+ N LG+P+D    +G  + S  I    P
Sbjct: 68  MSSTDGLVRGMDILDTGAPISVPVGKKTLGRIFNVLGEPVDEKGEVGAEETS-PIHRPAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                      F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +   +     
Sbjct: 127 KLTELDTAPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATNHGGVS 186

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 187 VFAGVGERTREGNDLYNEMIESGVINPDNLNDSKIALVYGQMNEPPGARMRVGLSGLTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 247 EYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LDG  VL+R+LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVLADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPSIVGEDHYNTARAVQSTLQRYKELQDIIAILGLDELSEED-RLTVDRARKIERFLSQP 423


>gi|300910439|ref|ZP_07127891.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|300888281|gb|EFK83472.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 470

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G     L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID  + +        I  + P   
Sbjct: 64  TDGVQRGMDVKDIGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVQILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     D    + V +   I  FL Q+
Sbjct: 362 EVARDVQSTLQKYRELQDIIAILGMDELSDED-KQTVERARRIQFFLSQN 410


>gi|153811248|ref|ZP_01963916.1| hypothetical protein RUMOBE_01640 [Ruminococcus obeum ATCC 29174]
 gi|149832746|gb|EDM87830.1| hypothetical protein RUMOBE_01640 [Ruminococcus obeum ATCC 29174]
          Length = 463

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 187/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +  +      + +V   +  D+V    +   E +
Sbjct: 4   GKIVQVMGPVVDVVFEDGDLPDIKDALEVENNGKKCVMEVSQHLGNDVVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++    C  GR+ N LG+ +DG +SL   +    I    P    ++ 
Sbjct: 64  QRDREVIATGSGIKVPVGDCTLGRLFNVLGETVDGGESLDDAE-HWVIHRDPPSFEEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    ++   +    S+   VGE
Sbjct: 123 AVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + KK+ +V    +E P  R     T +T+AEYF   +  +VLL 
Sbjct: 183 RSREGNDLWSEMKESGVLKKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDTEHRDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI       G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STTSGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 361 RVQEILQKYKELQDIIAILGMEELSDED-KNTVFRARKIQKFLSQP 405


>gi|7708458|emb|CAB89919.1| ATP synthase beta subunit [Kalanchoe daigremontiana]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V        + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFSPGNMPNIYNALVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +  G  S  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINAKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +  A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMXSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  F  Q 
Sbjct: 368 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFFSQP 426


>gi|14718177|gb|AAK72827.1| ATP synthase beta subunit [Phoenix canariensis]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|320102102|ref|YP_004177693.1| ATP synthase F1 subcomplex subunit beta [Isosphaera pallida ATCC
           43644]
 gi|319749384|gb|ADV61144.1| ATP synthase F1 subcomplex beta subunit [Isosphaera pallida ATCC
           43644]
          Length = 479

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/417 (27%), Positives = 186/417 (44%), Gaps = 24/417 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDN----LGQVIR-INLDIVYICPVGI 77
           G I+ +    + V      +  + + +    +++       G+V + +  + V    +G 
Sbjct: 8   GKITQVIGSTFDVEFPENQLPDIYNALTIDTESAGVPIKLTGEVQQQLGGNQVRCVALGS 67

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GRV N LG PIDG   +   +    I    P   
Sbjct: 68  TEGLVRGMPVHDTGGPVSVPVGKETLGRVFNLLGDPIDGRGPVNVSE-RWRIHRHAPDFD 126

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 + F+TGI+VID+ TP   G +IG+F G+G+GK+ +L               + +
Sbjct: 127 KLSPKTEVFETGIKVIDLLTPFVRGGKIGLFGGAGLGKTVILQELIARIAKVHSGFSVFA 186

Query: 194 LVGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   +     +          +V+     +E P  R    L+A+T AE+F
Sbjct: 187 GVGERTREGNDLWLEMQETKIGATGKSVIDSTVMYFGQMNEPPGARLRVALSALTSAEWF 246

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF+ +  E++   G +P   GY  ++ +E+  L ERI  +    
Sbjct: 247 RDSTGADVLLFIDNIFRFSQAGSEVSALLGRMPSNVGYQPTLATEMGALQERI--TSTVN 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G IT+V +V V  D+  DP   +    LD  IVL RS+AE+G YP +DPL S SR+ D  
Sbjct: 305 GAITSVQAVYVPADDLTDPAPATTFGFLDAFIVLQRSIAEKGIYPAIDPLGSSSRILDPQ 364

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  ++   +  ++ R+ E RDI  I G     +    + VH+   I  FL Q 
Sbjct: 365 YVGEEHYEVARRVQSILQRYRELRDIIAILGVDELSEED-KQIVHRARRIERFLSQP 420


>gi|315617528|gb|EFU98134.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli 3431]
          Length = 439

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 156/406 (38%), Positives = 225/406 (55%), Gaps = 7/406 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I++I               +G F  ++ +    L +VI IN D V++ P      +  
Sbjct: 29  GKITNIGGTIIKARL--PKARIGAF--YKIEPGQRLAEVIAINEDEVFLLPFEHVSGMYC 84

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  + + G  F+I       GR+++ +G+P+  +           + ++ P  + RQ ++
Sbjct: 85  GQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNIDALYLPFERSLYAEPPDPLLRQVID 144

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           + F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERGREV
Sbjct: 145 QPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERGREV 204

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+TR+
Sbjct: 205 NEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSVTRY 264

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN ND
Sbjct: 265 ARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDNVND 322

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PI D VRSILDGHIVL R LAEE  +P +D   S SR+      ++  +  +    LI  
Sbjct: 323 PIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKLIAT 382

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++    +  IG Y  G D   DKA+     I  F++QS  D+SS +
Sbjct: 383 YKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFIQQSTKDISSYE 428


>gi|56682983|gb|AAW21823.1| ATP synthase beta subunit [Lepidozamia hopei]
          Length = 424

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 166/367 (45%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +     +         K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDISGSKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|33318659|gb|AAQ05213.1| ATP synthase beta subunit [Ceratozamia miqueliana]
          Length = 484

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 181/429 (42%), Gaps = 31/429 (7%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI---- 69
           S  +    G I  I      V      +       +V   K  D  GQ I +  ++    
Sbjct: 3   STLVEKNVGRIVQIIGPVLDVAFPPGNMPNIFNSLIV---KGQDTAGQEIHVTCEVQQLL 59

Query: 70  ----VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     
Sbjct: 60  GNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ART 118

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 119 TSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 178

Query: 185 DCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKM 233
                  +S+ G   ER RE  +   +               K  +V    +E P  R  
Sbjct: 179 IAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDISRSKVALVYGQMNEPPGARMR 238

Query: 234 APLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  
Sbjct: 239 VGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGS 298

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VD
Sbjct: 299 LQERI--TSTKEGSITSIQAVYVPADDLTDPAPXTTFAHLDATTVLSRGLAAKGIYPAVD 356

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S S +        +  +    +   + R++E +DI  I G     +      V +  
Sbjct: 357 PLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARAR 415

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 416 KIERFLSQP 424


>gi|21633305|gb|AAM52127.1| ATP synthase beta subunit [Hewittia sublobata]
 gi|21633307|gb|AAM52128.1| ATP synthase beta subunit [Hewittia scandens]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNLVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|1146265|gb|AAB04681.1| flagellar export protein [Borrelia burgdorferi]
          Length = 436

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 146/441 (33%), Positives = 233/441 (52%), Gaps = 11/441 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M    E   +  +D     V   G +  I  +   V  L     +GD  +   +N   + 
Sbjct: 1   MSNFFENYLRQVDDIET--VSFVGRVQKIKGLL--VESLGPQCAIGDLCLIDQRNGKKVC 56

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
            +V+  N   V +        I +G+ V+   +   I+ S    GRVI++LG+PID   S
Sbjct: 57  AEVLGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGS 116

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
                    I  K+ P +NR   E    TG++V+D F P+    +  VF   G+G S L 
Sbjct: 117 FFNNSYKELIFQKINP-INRSIFEDQILTGVKVLDGFLPVAKRTKELVFFWFGVGNSYLC 175

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M A++   D  +I+ +GERGRE+ EFI  +   + LKKSV+VV+TSDESPI R     
Sbjct: 176 LGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAY 235

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  IAEYF  +G +VL   DSIT FA++ +   +     PVA+GYP SVF E+P LLER
Sbjct: 236 VATMIAEYFREQGKDVL-CFDSITWFANAKKRDVSFFRGAPVAKGYPPSVFVEIPILLER 294

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G      G++T   +VLV+GD+  +P+ D+++++LDGHI+L+R L + G YP ++ L+S
Sbjct: 295 SG-FNGNGGSVTGFYTVLVEGDDFTEPVDDNIKAVLDGHIILDRDLFDRGIYPSINVLSS 353

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            SR   +  S +++KL+    +L+  +++  D+   G Y  G +  +D A+ + P I +F
Sbjct: 354 TSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINF 413

Query: 417 LKQSPSDLSSEDVFQEITKKL 437
           + Q  ++    +  ++  K++
Sbjct: 414 ISQGINETFDFENLEDEIKEI 434


>gi|72534377|emb|CAH58817.1| ATP synthase alpha chain [Enterococcus villorum]
          Length = 367

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGESLIGRVVNPLGQPIDGLGEIV-TDKARPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTILNQKGQNMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|224830562|gb|ACN66376.1| ATP synthase beta chain [Penianthus longifolius]
          Length = 461

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 4   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 61

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 62  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 120

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 121 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 180

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 181 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 240

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 241 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 299 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 358

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|183220215|ref|YP_001838211.1| F0F1 ATP synthase subunit beta [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910333|ref|YP_001961888.1| F0F1 ATP synthase subunit beta [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|226740649|sp|B0SDA5|ATPB_LEPBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740650|sp|B0SLC8|ATPB_LEPBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167775009|gb|ABZ93310.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778637|gb|ABZ96935.1| ATP synthase F1, beta subunit [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 468

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQ----GKNSDNLGQVIRINLDI-VYICPVGI 77
           G I  I      ++  S  +  + + V  Q    GK+     +V +   D  V    +  
Sbjct: 4   GKIKQIIGSVMDISFESGNMPEIYNAVEIQTKVNGKDVTITAEVQQHIGDNTVRAISLQS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LG+ ID    L K    M I    P   
Sbjct: 64  TDGLKRGLEVTDTGIPISVPVGTKTLGRIFNVLGEAIDELGDLPKDVKKMPIHRNAPTYE 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
             +   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         + +
Sbjct: 124 EIKPKTEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+V+     +E P  R    L+A+T+AE F  +   +
Sbjct: 184 GVGERTREGNDLWNEMKESGVIDKTVLCFGQMNEPPGARLRVALSALTMAENFRDESGSD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           +LL +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT+V 
Sbjct: 244 ILLFVDNIFRFSQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTTRGSITSVQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           ++ V  D+  DP   +  + LD   VL+R+++E+G YP VDPL S SR+ +      +  
Sbjct: 302 AIYVPADDLTDPAPATAFTHLDATTVLSRAISEKGIYPAVDPLDSTSRIMNPQIVGEEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++ R+++ +DI  I G     +      V +   +  FL Q 
Sbjct: 362 STAREVQRILQRYKDLQDIIAILGMDELSEDD-KILVARARRLEKFLSQP 410


>gi|110915670|gb|ABH02623.1| ATP synthase beta subunit [Milium vernale]
          Length = 472

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 34  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 93

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 94  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 152

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 153 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+    ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 273 QXTLSTEMGSXQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  ++   +   + R++E +DI  I G     + 
Sbjct: 331 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYEIAQRVKETLQRYKELQDIIAILGLDELSEE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 391 D-RLTVARARKIERFLSQP 408


>gi|152993354|ref|YP_001359075.1| F0F1 ATP synthase subunit beta [Sulfurovum sp. NBC37-1]
 gi|190358707|sp|A6QB59|ATPB_SULNB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151425215|dbj|BAF72718.1| F0F1-type ATP synthase, beta subunit [Sulfurovum sp. NBC37-1]
          Length = 466

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/410 (27%), Positives = 188/410 (45%), Gaps = 16/410 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGI 77
            G I  +      V        + + +    + +GK    + +V   +  + V    + +
Sbjct: 2   TGKIVQVLGPVIDVDFTDYLPEINEALETTFMFEGKEQKLVLEVAAQLGDNRVRTIAMDM 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   ++       GR+ N +G+ ID    + +      I    PP  
Sbjct: 62  SEGVVRGQEVKATGDSIQVPVGEEVLGRIFNVIGEAIDEAGPV-EAKTHWSIHRDPPPFE 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         + +
Sbjct: 121 DQSTKTEVFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELINNVAMKHSGYSVFA 180

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +    N+  K  +      E P  R    LT +T+AEYF  +   +
Sbjct: 181 GVGERTREGNDLYYEMKESNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEMGLD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I RFA S  E++   G +P A GY  ++  E+  L ERI  +   KG+IT+V 
Sbjct: 241 VLMFIDNIFRFAQSGSEMSALLGRIPSAVGYQPTLSREMGALQERI--TSTTKGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   SV + LD   VLNRS+AE+G YP VDPL S SR+ D      +  
Sbjct: 299 AVYVPADDLTDPAPASVFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ ++++ +DI  I G     +      V +   I  +L Q 
Sbjct: 359 NVARGVQQILQKYKDLQDIIAILGMDELSEDD-KLVVERARKIEKYLSQP 407


>gi|75326810|sp|Q7H8L9|ATPB_IPOOB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|21633273|gb|AAM52111.1| ATP synthase beta subunit [Turbina corymbosa]
 gi|21633277|gb|AAM52113.1| ATP synthase beta subunit [Ipomoea obscura]
 gi|21633293|gb|AAM52121.1| ATP synthase beta subunit [Argyreia splendens]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|293393689|ref|ZP_06637998.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582]
 gi|291423811|gb|EFE97031.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582]
          Length = 460

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  +      V      V  + D +  +      + +V + +   +V    +G  
Sbjct: 1   MATGKIIQVIGAVVDVEFPQDAVPKVYDALEVENGTETLVLEVQQQLGGGVVRCIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR++N LG+PID    +G+ +    I    P    
Sbjct: 61  DGLRRGLKVNDLQHPIEVPVGKATLGRIMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
               +   +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + + 
Sbjct: 120 LSNSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      +   +
Sbjct: 298 YVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ARGVQSILQRYQELKDIIAILGMDELSEDD-KLVVSRARKIQRFLSQP 404


>gi|183206526|gb|ACC54461.1| ATP synthase beta subunit [Campanula reverchonii]
          Length = 480

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDPLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGLEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYKTAQNVKQTLQRYKELQDIITILGLDELSEDD-RLTVARARKIERFLSQP 416


>gi|42559060|gb|AAS20216.1| ATP synthase beta subunit [Tricyrtis sp. Waterway s.n.]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|21633283|gb|AAM52116.1| ATP synthase beta subunit [Stictocardia incomta]
          Length = 490

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|4206572|gb|AAD11717.1| ATP synthase beta subunit [Adenandra uniflora]
          Length = 468

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G+I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 4   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|12004157|gb|AAG43918.1|AF213787_1 ATP synthase beta subunit [Primula sieboldii]
 gi|57868918|gb|AAW57455.1| ATP synthase alpha subunit [Primula elatior]
          Length = 463

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 26  KGRNTAGQPINVTCEVXQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLHMEMKESGVINEENIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 323 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLTVARARKIERFLSQP 410


>gi|4995715|emb|CAB44231.1| H(+)-transporting ATP synthase [Matisia cordata]
          Length = 482

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + +  V +G   D+ GQ I +  ++        V    
Sbjct: 6   GRISQIIGPVLDVAFPPGKMPNIYNAXVVKG--RDSAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPXSVPVGGATLGRIFNVLGEPVDNLRPVD-TRTTSPIHKPAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|29726126|gb|AAD00590.2| ATP synthase beta subunit [Stylophorum diphyllum]
          Length = 496

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +       P
Sbjct: 77  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPXHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G  P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXXPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|229014475|ref|ZP_04171593.1| ATP synthase subunit beta [Bacillus mycoides DSM 2048]
 gi|229170013|ref|ZP_04297705.1| ATP synthase subunit beta [Bacillus cereus AH621]
 gi|228613438|gb|EEK70571.1| ATP synthase subunit beta [Bacillus cereus AH621]
 gi|228746825|gb|EEL96710.1| ATP synthase subunit beta [Bacillus mycoides DSM 2048]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGDVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR        +E   +   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYGVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|124361612|gb|ABN09248.1| ATP synthase beta subunit [Diospyros australis]
 gi|124361614|gb|ABN09249.1| ATP synthase beta subunit [Diospyros australis]
 gi|124361624|gb|ABN09254.1| ATP synthase beta subunit [Diospyros brassica]
 gi|124361690|gb|ABN09287.1| ATP synthase beta subunit [Diospyros macrocarpa]
 gi|221078689|gb|ACL99419.1| ATP synthase beta subunit [Diospyros balansae]
 gi|221078721|gb|ACL99435.1| ATP synthase beta subunit [Diospyros macrocarpa]
 gi|221078731|gb|ACL99440.1| ATP synthase beta subunit [Diospyros oubatchensis]
 gi|221078733|gb|ACL99441.1| ATP synthase beta subunit [Diospyros oubatchensis]
          Length = 465

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V + G    +       GR+ N LG+P+D    +        I    P  
Sbjct: 61  ATDGLTRGMEVINTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTRSPIHRSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|119368000|dbj|BAF40483.1| ATP synthase beta subunit [Ixonanthes reticulata]
          Length = 489

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVRG--RDTVGEQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+ ID    L     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGETIDDLG-LVDTRTTSPIHRAAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|114216226|gb|ABI54723.1| ATPase alpha subunit [Phyllocladus aspleniifolius]
          Length = 375

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 86/370 (23%), Positives = 155/370 (41%), Gaps = 18/370 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G    +       GRV++ALG PIDG  +
Sbjct: 9   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKALLGRVVDALGVPIDGRGT 68

Query: 119 L--GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
           L   KG     + +K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ 
Sbjct: 69  LQVDKGAERRRVEAKAPGIIERKSVHEPLQTGLKAVDSLVPIGRGQRELIIGDRQTGKTA 128

Query: 177 LLSMFARSDC---------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           +      +               +   +G++   V + ++     D L  +++  AT+ +
Sbjct: 129 IAIDIILNQKRSHLSGTSDSVYCVYVAIGQKRSTVAQLVQIISEADALGYTIINAATASD 188

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 189 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 248

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I     L  
Sbjct: 249 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICPETELFY 308

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G  P ++   SVSR+   A     K++  SL     ++ E   +     +   +D    
Sbjct: 309 RGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKPEPAQYRE---VAAFAQFGSDLDAATQ 365

Query: 405 KAVHQVPIIY 414
             +++   + 
Sbjct: 366 ALLNRGARLT 375


>gi|21684891|emb|CAD11572.1| ATP synthase beta subunit [Paepalanthus fasciculatus]
          Length = 485

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  +    + 
Sbjct: 15  GRIAQIIGPVLDVVFSPGKMPNIYNALVVKGRDNADQQINVTCEVQQLLGNNRIRAVAMS 74

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG PID    +     +  I    P  
Sbjct: 75  ATDGLTRGMEVIDTGSPLSVPVGGATLGRIFNVLGDPIDNLGPVDSS-ATSPIHRSAPAF 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 134 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 193

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 194 GGVGERTREGNDLYMEMKESGVINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 253

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 254 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 311

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 312 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 371

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 RIVGNEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|224552896|gb|ACN54686.1| ATP synthase F1 subunit 1 [Araucaria araucana]
          Length = 404

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 89/402 (22%), Positives = 163/402 (40%), Gaps = 23/402 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L++ +  G+ V      S   G  + +    V I   G    I  GDLV   G   
Sbjct: 1   RVYGLNE-IQAGEMVEFA---SGVKGIALNLENANVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ALG PIDG  +L +G     + +K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPVGKVLLGRVVDALGVPIDGKGAL-QGAERRRVEAKAPGIIERKSVHEPLQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----------IISLVGERGREV 202
              P+  GQR  +      GK+ +      +     +           +   +G++   V
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRFHLLDGTSADSVYRVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++        + S++  AT+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQIPSEAAALEYSIINAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R++A      P    +P  V     RL ER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMALLLRRPPGREAFPGDVSYSHSRLSERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V SI DG I     L   G  P ++   SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVISITDGQICPETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKPE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +         +D      +++   + +  KQ  
Sbjct: 356 LAQYRE---VAASAQSGSDLDAATQALLNRGARLTEVPKQPQ 394


>gi|241912876|gb|ACS72116.1| AtpB [Pachyplectron arifolium]
          Length = 489

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFSPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|323339972|ref|ZP_08080239.1| ATP synthase F1 sector beta subunit [Lactobacillus ruminis ATCC
           25644]
 gi|323092614|gb|EFZ35219.1| ATP synthase F1 sector beta subunit [Lactobacillus ruminis ATCC
           25644]
          Length = 467

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/375 (29%), Positives = 179/375 (47%), Gaps = 11/375 (2%)

Query: 54  KNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111
             +D + +V + +   I+    +   + +  G  V   GR   +       GRV N LG+
Sbjct: 37  DGTDLIIEVTLELGDGIMRTIAMDSTDGLKRGAEVVDTGRSISVPVGKDTLGRVFNVLGE 96

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           PID      +      I    P         +  +TGI+VID+  P   G +IG+F G+G
Sbjct: 97  PIDNGPEFEEDHRRDPIHRDAPSYEELSTGTEILETGIKVIDLLAPYIKGGKIGLFGGAG 156

Query: 172 IGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
           +GK+ L+     +   +   IS+   VGER RE  +   +     + +K+ +V    +E 
Sbjct: 157 VGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYYEMKESGVLEKTAMVFGQMNEP 216

Query: 228 PILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++
Sbjct: 217 PGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 276

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L R+L ++G
Sbjct: 277 ATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERALTQQG 334

Query: 347 RYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPLAS S          +  ++ + + H++ R+ E +DI  I G     D     
Sbjct: 335 IYPAVDPLASTSSALSPEIVGEEHYQVATEVQHVLQRYRELQDIISILGMDELSDEE-KV 393

Query: 406 AVHQVPIIYDFLKQS 420
            V +   I  FL Q+
Sbjct: 394 IVARARRIQFFLSQN 408


>gi|119350461|gb|ABL63181.1| AtpB [Carteria crucifera]
          Length = 392

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 166/368 (45%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   + +
Sbjct: 2   DNCVRAVAMQPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGPVETQE-T 60

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 61  LPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 120

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   +               K  +V    +E P  R   
Sbjct: 121 AKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPXARMRV 180

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 181 ALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGAL 240

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 241 QERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 298

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +       +       S+   + R++E +DI  I G     +      V +   
Sbjct: 299 LDSTSTMLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLLVARARK 357

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 358 IERFLSQP 365


>gi|37720969|gb|AAN32487.1| ATP synthase beta subunit [Roystonea princeps]
          Length = 497

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVX-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7688413|emb|CAB89735.1| ATP synthase beta subunit [Valeriana officinalis]
          Length = 488

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  G+ I +  ++        V    
Sbjct: 19  GRIIQIIGPVIDVVFPPGKMPNIYNALVVKG--RDTAGEPINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG P+D    +     +  I    P
Sbjct: 77  MSATDVLTRGMEVXDTGXPISVPVGGATLGRIFNVLGAPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGDXHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|312285205|gb|ADQ64344.1| ATP synthase beta subunit [Caryomene grandifolia]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+PID    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|294505644|ref|YP_003569706.1| ATP synthase beta subunit protein [Yersinia pestis Z176003]
 gi|294356103|gb|ADE66444.1| ATP synthase beta subunit protein [Yersinia pestis Z176003]
          Length = 447

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 17  LEVEGTTEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIM 76

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG+PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 77  NVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 135

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 136 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 195

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 196 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 255

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 256 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 313

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 314 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 373

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 374 D-KLVVSRARKIQRFLSQP 391


>gi|6724285|gb|AAB51730.2| ATP synthase beta chain [Psilotum nudum]
          Length = 460

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 16  KGQNPAGQQINVTCEVQQLLGNNKVRAIAMSATDGLTRGMEVIDTGAPLSVPVGQATLGR 75

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +   D    I    P           F+TGI+V+D+  P   G +I
Sbjct: 76  IFNVLGEPVDNLGPIN-ADKKSSIHEPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 134

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 135 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYTEMKESKVINEQNLS 194

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+TIAEYF      +VLL +D+I RF  +  E++  
Sbjct: 195 ESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 255 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 312

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 313 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 372

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 373 ILGLDELSEED-RLTVARARKIERFLSQP 400


>gi|312285267|gb|ADQ64375.1| ATP synthase beta subunit [Sinomenium acutum]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 182/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+ N LG+P+D    +     S  I    P  +   
Sbjct: 63  LMRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSSTTS-PIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 412


>gi|224830548|gb|ACN66369.1| ATP synthase beta chain [Tinospora esiangkara]
          Length = 477

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 73  MSATDGLMRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|198284879|ref|YP_002221200.1| ATP synthase F1 subunit beta [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665303|ref|YP_002427559.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198249400|gb|ACH84993.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517516|gb|ACK78102.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 469

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/404 (27%), Positives = 186/404 (46%), Gaps = 12/404 (2%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G+I  +      V     Q   + + +V    N     Q  ++   +     +G  E + 
Sbjct: 12  GHIVQVIGPVIDVAFSRGQVPEIMEAIVVDANNLTIEVQA-QLGDGVARGIAMGPSEGLK 70

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N LG+P+DG   +   D    I    P        
Sbjct: 71  RGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAAS 129

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+ L+    R+   +     + + VGER
Sbjct: 130 TEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGER 189

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            RE  +F  +     +  K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D
Sbjct: 190 TREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFID 249

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  
Sbjct: 250 NIFRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPA 307

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSL 376
           D+  DP   +  + LD  +VL+R +AE G YP +DPL S SR  D      +   +  S 
Sbjct: 308 DDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSC 367

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              + R++E +DI  I G     +      V +   I  +L Q 
Sbjct: 368 QKTLQRYKELQDIIAILGMDELSEDD-KLLVSRARKIQRYLSQP 410


>gi|119350511|gb|ABL63206.1| AtpB [Microspora sp. UTEX LB 472]
          Length = 392

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 165/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +G  + ++ I
Sbjct: 5   VRAVSMNPTDGLMRGMEVLDTGTPLTVPVGKATLGRIFNVLGEPVDELGPVGNQE-TLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLAESKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYGTAQNVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|56675901|emb|CAB89914.2| ATP synthase beta subunit [Ipomoea mauritiana]
          Length = 486

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 24/418 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN-----SDNLGQVIRINLDI-VYICPVG 76
           G  +  I  V        +   + + +V QG++     ++   +V ++  +  V    + 
Sbjct: 16  GRXVQIIGPVIDVAFPPGKMPNIYNALVVQGRDXXXEQTNVXCEVQQLLGNNRVRAVAMS 75

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  
Sbjct: 76  DTDGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAF 134

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 135 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 194

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 195 GGVGERTREGNDLYLEMKESGVINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEY 254

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 255 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 312

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 313 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 372

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLXVARARKIERFLSQP 429


>gi|5031143|gb|AAD38082.1|AF093421_1 ATP synthase beta subunit [Styloceras laurifolium]
          Length = 484

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D          S  I    P
Sbjct: 65  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGXXXXXXXS-PIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|323715442|gb|ADY04789.1| ATP synthase beta subunit [Nyssa ogeche]
          Length = 492

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D  GQ I +  ++        +   
Sbjct: 15  GRIAQIIGPVLDVAFPPGKMPYIYNALVV---KGRDTAGQPINVTCEVQQLLGNNRIRAV 71

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 72  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 131 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 190

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 191 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 250

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G++P A GY  ++ +E+  L ERI  +
Sbjct: 251 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGKMPSAVGYQPTLSTEMGSLQERI--T 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 309 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPTVDPLDSTSTM 368

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 369 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 427

Query: 420 S 420
            
Sbjct: 428 P 428


>gi|308183236|ref|YP_003927363.1| F0F1 ATP synthase subunit beta [Helicobacter pylori PeCan4]
 gi|308065421|gb|ADO07313.1| F0F1 ATP synthase subunit beta [Helicobacter pylori PeCan4]
          Length = 469

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQVVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLNPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 410


>gi|258541222|ref|YP_003186655.1| F0F1 ATP synthase subunit beta [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632300|dbj|BAH98275.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-01]
 gi|256635357|dbj|BAI01326.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-03]
 gi|256638412|dbj|BAI04374.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-07]
 gi|256641466|dbj|BAI07421.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-22]
 gi|256644521|dbj|BAI10469.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-26]
 gi|256647576|dbj|BAI13517.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-32]
 gi|256650629|dbj|BAI16563.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256653620|dbj|BAI19547.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-12]
          Length = 490

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/432 (26%), Positives = 184/432 (42%), Gaps = 25/432 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ I      V    +   + +   V  G  +  L     I    V    +   + + 
Sbjct: 20  GRITEIKGPVVDVQFEGELPKILNALHVKLGDQTLVLEVAQEIGEHEVRCIAMDSTDGLV 79

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G +  +       GR++N +G+PID    +        I  + P   ++   
Sbjct: 80  RGAEVADTGAQITVPVGPETLGRILNVIGEPIDEKGPIPTS-RRAPIHRQAPAFEDQAAA 138

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ ++     +         + + VGER
Sbjct: 139 SEILMTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGER 198

Query: 199 GREVREFIEDYLGDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            RE  +   +     +            K  +V    +E P  R    LT +T+AEYF  
Sbjct: 199 TREGNDLYYEMQDAGVIKLGENGSTEGSKVALVFGQMNEPPGARARVALTGLTLAEYFRD 258

Query: 248 K-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+
Sbjct: 259 EENQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGS 316

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD   VLNRS+AE G YP VDPL S SR  D    
Sbjct: 317 ITSVQAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRALDPQIV 376

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q      
Sbjct: 377 GQEHYDVACEVQRILQTYKSLQDIIAILGMDELSEDD-KLIVARARRIQRFLSQP---FH 432

Query: 426 SEDVFQEITKKL 437
             +VF     KL
Sbjct: 433 VAEVFTGAPGKL 444


>gi|157285179|gb|ABV31329.1| ATPase [Vibrio pectenicida]
 gi|157285295|gb|ABV31387.1| ATPase [Vibrio pectenicida]
          Length = 441

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 99/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGS---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ L   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP    T+ EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNADYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNSGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|157285173|gb|ABV31326.1| ATPase [Vibrio fischeri]
 gi|315583682|gb|ADU34071.1| AtpA [Aliivibrio fischeri]
          Length = 441

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 178/420 (42%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GIINIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +A  + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALAYTIVVVASASESAALQYLAPYSACAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVERFTNGEVTGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 410


>gi|113910822|gb|ABI48143.1| ATPase beta subunit [Fossombronia pusilla]
          Length = 472

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 34  GQEINVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGETTLGRIFNVLG 93

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +   D    I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 94  EPVDNLGPVS-SDTMFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 152

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 153 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDEQNISQSKVAL 212

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 213 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 272

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 273 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 331 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 390

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 391 LSEED-RLIVSRARKIERFLSQP 412


>gi|75336422|sp|Q9MRM0|ATPB_CANWI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7687968|emb|CAB89707.1| ATP synthase beta subunit [Canella winterana]
 gi|33327743|gb|AAQ09235.1| ATP synthase beta subunit [Canella winterana]
          Length = 498

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + ++ +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+PID          +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGP-ADTRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|12004137|gb|AAG43908.1|AF213777_1 ATP synthase beta subunit [Lysimachia maxima]
          Length = 482

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDMAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLHMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|261253521|ref|ZP_05946094.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
 gi|260936912|gb|EEX92901.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
          Length = 461

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/408 (26%), Positives = 185/408 (45%), Gaps = 17/408 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G I  I      V    +    + D +    +    L  V+     +   IV    +G  
Sbjct: 4   GKIVKIIGAVVDVEFEHNTGPRVYDALRVVDQEFSAL--VLEVQQQLGGGIVRCIVMGSS 61

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR++N LG+PID    +G+  ++  I    P    
Sbjct: 62  DGLRRGLSVQSTGEPITVPVGEETLGRIMNVLGEPIDECGPIGE-KMNYGIHRSAPSYEE 120

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 121 QSNSSELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG 180

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +VL
Sbjct: 181 VGERTREGNDFYYEMKEAGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVL 240

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 241 LFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAV 298

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   +
Sbjct: 299 YVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPMIVGQEHYDV 358

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   + R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 359 AQNVQMTLQRYKELKDIIAILGMDELSEED-KQLVSRARKVERFLTQP 405


>gi|262201858|ref|YP_003273066.1| ATP synthase F1 subunit alpha [Gordonia bronchialis DSM 43247]
 gi|262085205|gb|ACY21173.1| ATP synthase F1, alpha subunit [Gordonia bronchialis DSM 43247]
          Length = 542

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/453 (22%), Positives = 182/453 (40%), Gaps = 28/453 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           +  + + + +  E Y  +   +      G I+        V+ L       + +   G  
Sbjct: 4   LTISPDEIKRAIEQYVSSFEAEASRDEVGTITDTADGIAHVSGL-PGAMANELLQFPGG- 61

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
              LG  + ++ D +    +G   ++  G  V   G    +     + GRV++ LG PID
Sbjct: 62  --VLGVALNLDEDKIGAVILGEYADLEEGQEVSRTGEVLSVPVGDKFLGRVVDPLGAPID 119

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +   +  + +  +    + RQ VE+   TGI+ ID  T +  GQR  V      GK
Sbjct: 120 GLGDIEAEEQRV-LELQAASVLERQPVEESLATGIKAIDAMTAIGRGQRQLVIGDRKTGK 178

Query: 175 -----STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
                  +L+  A  +  D     + I   +G++G  +             + + +V A 
Sbjct: 179 TAVCIDAILNQKANWESGDPDKQVRCIYVAIGQKGSTIAGVKTALEEAGALEYTTIVAAP 238

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +S   + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    YP
Sbjct: 239 ASDSAGFKWLAPYTGSAIGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYP 298

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER      +   G++T +  +    ++ +  I  +V SI DG + L   
Sbjct: 299 GDVFYLHSRLLERCAKLSDDMGGGSMTGLPIIETKANDVSAFIPTNVISITDGQVFLESD 358

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L  +G  P ++   SVSR+   A +   KK+  SL   + +F E         +   +D 
Sbjct: 359 LFNKGVRPAINVGTSVSRVGGAAQTKGLKKVSGSLRLELAQFRELE---AFSAFASDLDD 415

Query: 402 ILDKAVHQVPIIYDFLKQSP-SDLSSEDVFQEI 433
                + +     + LKQ   S  S ED    I
Sbjct: 416 ASKAQLERGARWVEMLKQDQYSPYSVEDEIVSI 448


>gi|156622729|dbj|BAF76345.1| ATP synthase beta subunit [Amborella trichopoda]
          Length = 487

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 110/423 (26%), Positives = 178/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I+ I      V      +       VV   K  D  GQ I +  ++        V 
Sbjct: 11  SVGRIAQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTAGQQINVTCEVQQLLGNNRVR 67

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 68  TVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVD-TRTTSPIHR 126

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +I +F  +G+GK+ L+     +      
Sbjct: 127 SAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIALFGRAGVGKTVLIMELINNIAKAHG 186

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+
Sbjct: 187 GVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTAL 246

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 247 TMAEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 305

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 306 -TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTS 364

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI  I G     +      V +   I  FL
Sbjct: 365 TMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGPDELSEED-RLTVARARKIERFL 423

Query: 418 KQS 420
            Q 
Sbjct: 424 SQP 426


>gi|8452708|emb|CAB89947.2| ATP synthase beta subunit [Oncidium excavatum]
          Length = 483

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 182/422 (43%), Gaps = 29/422 (6%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYI 72
             G I+ I      V     +   + + +V +G   D +GQ I +  ++        V  
Sbjct: 19  SXGRIAQIIGPVLDVXFPPGKMPXIYNALVIKG--RDTVGQQINVTCEVQQLLGNNRVRA 76

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I   
Sbjct: 77  VAMSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRS 135

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 136 APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 195

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 196 VSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALT 255

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 256 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 313

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 314 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 373

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +     R++E +DI  I G     +      V +   I  FL 
Sbjct: 374 MVQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLS 432

Query: 419 QS 420
           Q 
Sbjct: 433 QP 434


>gi|66821913|gb|AAY57284.1| ATPase alpha subunit [Hernandia ovigera]
          Length = 366

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 84/367 (22%), Positives = 154/367 (41%), Gaps = 18/367 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 4   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++           +   +G++   V + ++     N  + S++V AT+ + 
Sbjct: 123 IDTILNQKQMNEKGTESETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASDP 182

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 183 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 242

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L   
Sbjct: 243 YLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYR 302

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G  P ++  +SVSR+   A     K++  S    + ++ E   +  +  +   +D +   
Sbjct: 303 GIRPAINVGSSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAVTQA 359

Query: 406 AVHQVPI 412
             ++   
Sbjct: 360 LPNRGAR 366


>gi|288925060|ref|ZP_06418996.1| ATP synthase F1, alpha subunit [Prevotella buccae D17]
 gi|315608099|ref|ZP_07883092.1| ATP synthase F1 sector alpha subunit [Prevotella buccae ATCC 33574]
 gi|288338250|gb|EFC76600.1| ATP synthase F1, alpha subunit [Prevotella buccae D17]
 gi|315250568|gb|EFU30564.1| ATP synthase F1 sector alpha subunit [Prevotella buccae ATCC 33574]
          Length = 528

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 92/444 (20%), Positives = 170/444 (38%), Gaps = 37/444 (8%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L QL +    +   + G + +++     +  L +     + +  +      +  V+ +  
Sbjct: 15  LQQLRQINGDDQFDEVGTVLTVSDGVARIYGL-RNAEANELLEFENG---TMAIVMNLEE 70

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLG-KGDLS 125
           D V    +G    I  G  V    R   I  +  + GRV+N LG+ IDG   +   G   
Sbjct: 71  DNVGCILLGPTAGIKEGQSVKRTHRIASIQVNDNFLGRVVNPLGQAIDGLGDIDLTGAFE 130

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M +  K P  + RQ V++  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 131 MPLDRKAPGVIYRQPVKEPLQTGLKAVDSMIPIGRGQRELIIGDRQTGKTAIAVDAIINQ 190

Query: 186 CF-------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
                       I   +G++   V   ++          +++V AT+ +   ++  AP  
Sbjct: 191 KSFYEAGNPVYCIYVAIGQKASTVATLVQTLKEHGALPYTIIVSATAADPAAMQYYAPFA 250

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              I EYF  +G + L++ D +++ A + RE++           YP  VF    RLLER 
Sbjct: 251 GAAIGEYFRDRGLSALVVYDDLSKQAVAYREVSLILRRPSGREAYPGDVFYLHSRLLERA 310

Query: 298 GPSEKE--------------------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
                +                     G++TA+  +     + +  I  +V SI DG I 
Sbjct: 311 ARINDQQEVAEQMNDLPECMKGHVRGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIY 370

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L  +L  +G  P ++   SVSR+   A     KK+  +L     ++ E         +  
Sbjct: 371 LETNLFNQGFRPAINVGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKFSS 427

Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421
            +D +    + +       L Q  
Sbjct: 428 DMDAVTAMTLDRGRKNNQLLIQPQ 451


>gi|224830516|gb|ACN66353.1| ATP synthase beta chain [Cocculus balfourii]
          Length = 445

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 2   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 59

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 60  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 118

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 119 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 178

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 179 ERTREGNDLYMEMKESGVINEENIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 239 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 297 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 356

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|157285107|gb|ABV31293.1| ATPase [Vibrio diazotrophicus]
          Length = 441

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDAMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDDATKRQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|157285101|gb|ABV31290.1| ATPase [Vibrio halioticoli]
          Length = 441

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 171/407 (42%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L++ V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAE-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPINAA-LTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDTTKKQLDHGAKVTELMKQKQ 399


>gi|124361642|gb|ABN09263.1| ATP synthase beta subunit [Diospyros crassinervis]
          Length = 465

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       +V   K  D +GQ I +  ++        V   
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNSLIV---KGRDTVGQPISVTCEVQQLLGNNRVRAV 57

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 58  AMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 116

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 117 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 176

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 177 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 236

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 237 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 294

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 295 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 354

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 355 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 413

Query: 420 S 420
            
Sbjct: 414 P 414


>gi|7708666|emb|CAB89993.1| ATP synthase beta subunit [Styrax japonicus]
          Length = 478

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 178/418 (42%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSD----NLGQVIRINLDI-VYICPVG 76
           G I  I      V      +       VV      D       +V ++  +  V    + 
Sbjct: 7   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKVRDTVDQPINVTCEVQQLLGNNRVRAVAMS 66

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P  
Sbjct: 67  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAPAF 125

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 126 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 185

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 186 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 245

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 246 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 304 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 363

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|17224778|gb|AAL37110.1| ATP synthase beta subunit [Pentastemona sumatrana]
          Length = 497

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   +    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 20  GRIAQIIGPVLDVIFPPGKMPNIYNALVVKGRDTIVQQINVTCEVQQLLGNNRVRAVAMS 79

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 80  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAPAF 138

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 139 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 198

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+TIAEY
Sbjct: 199 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTIAEY 258

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 259 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 316

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 317 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 376

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 377 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|328885070|emb|CCA58309.1| ATP synthase alpha chain [Streptomyces venezuelae ATCC 10712]
          Length = 532

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 91/435 (20%), Positives = 166/435 (38%), Gaps = 24/435 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYQPDAASREEVGTVSLAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQSVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 EGRRALELQAPGVMARKSVHEPMETGYKAVDAMTPVGRGQRQLIIGDRQTGKTALCVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   VG++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAVGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYQGKHVLIVFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDELGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQISGRLRVDLAQFRELEAFAAFG---SDLDAASKAQLER 424

Query: 410 VPIIYDFLKQSPSDL 424
              + + LKQ+    
Sbjct: 425 GQRMVELLKQAQYQP 439


>gi|223585573|gb|ACM91676.1| F1F0-ATP synthase beta subunit [Marsupenaeus japonicus]
          Length = 525

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 190/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G + ++      V    +   + + +    ++   + +V   +  + V    +   E
Sbjct: 55  VPNGSVVAVIGAVVDVQFDGELPPILNALEVANRSPRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+ V   G    I       GR+IN +G+PID    +     S  I ++ P  +  
Sbjct: 115 GLIRGNAVVDTGSPISIPVGPGTLGRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RFA +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFAQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  S+  ++   +  +DI  I G     +      V +   I  FL Q 
Sbjct: 412 HEHYNVARSVQKILQDHKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 464


>gi|183206624|gb|ACC54510.1| ATP synthase beta subunit [Campanula exigua]
          Length = 477

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LG  I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTLGHPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|254509752|ref|ZP_05121819.1| H+-transporting two-sector ATPase, flagellum-specific
           [Rhodobacteraceae bacterium KLH11]
 gi|221533463|gb|EEE36451.1| H+-transporting two-sector ATPase, flagellum-specific
           [Rhodobacteraceae bacterium KLH11]
          Length = 454

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 160/418 (38%), Positives = 243/418 (58%), Gaps = 3/418 (0%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M  + + +    E      V   G +S +T     +  L+Q   +GD   + +    D  
Sbjct: 1   MMSDPDPMRLKCELDRMRAVRHTGRVSGVTGGVIRIDGLAQRARIGDHLTLRRNSGPDLQ 60

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+ ++ D +++ P    + +SLGD V        +P   W GRVI+  G P+DG   L
Sbjct: 61  GEVLHVDADQIHMLPGAAPDGVSLGDPVSLDQLPAFAPGMHWLGRVIDPFGAPLDGK-PL 119

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G    ++M   P A++R+ +    +TG+ +++   P+  GQRIG+FAGSG+GKSTLL+
Sbjct: 120 LPGTQECDLMQTPPAAVSRKPLGARMETGLAILNTMLPIVQGQRIGLFAGSGVGKSTLLA 179

Query: 180 MFARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTA 238
             AR+   D V+++LVGERGREV EF+E     D +++SVVV ATSD+S + R+    +A
Sbjct: 180 TLARTMQADAVVVALVGERGREVNEFVETALGADGMRRSVVVAATSDQSALARRRCAWSA 239

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AEY   +G NVL + DS+TRFA + REIA  +GE    RG+P SV   +  L ER G
Sbjct: 240 MSVAEYLRDQGLNVLFLADSVTRFAEAHREIAVATGESASLRGFPPSVTPLIANLCERAG 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P   ++G+ITAV SVLV G + ++PIAD +R +LDGHIVL+R +AE GRYP +D   SVS
Sbjct: 300 PGTAQQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLSRDIAERGRYPAIDLSKSVS 359

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           R    A + DE ++++    L+  +E++  +   G Y  G D +LD+AV     +  F
Sbjct: 360 RSLPGAATEDENQVITDARKLVGSYEQSEVMIKAGLYAEGADPLLDRAVRVHDELDAF 417


>gi|18033065|gb|AAL56974.1|AF326326_1 ATP synthase [Pasteurella multocida subsp. multocida]
 gi|18033067|gb|AAL56975.1|AF326327_1 ATP synthase [Pasteurella multocida subsp. gallicida]
 gi|18033069|gb|AAL56976.1|AF326328_1 ATP synthase [Pasteurella multocida subsp. gallicida]
 gi|18033071|gb|AAL56977.1|AF326329_1 ATP synthase [Pasteurella multocida subsp. septica]
          Length = 431

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 175/371 (47%), Gaps = 14/371 (3%)

Query: 60  GQVIR----INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           G V+     +   +V    +G  + +  G  V +      +       GR++N LG+PID
Sbjct: 24  GLVLEVQQQLGGGVVRCIAMGSSDGLKRGLSVTNTNNPISVPVGTKTLGRIMNVLGEPID 83

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +G  + +  I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK
Sbjct: 84  EQGEIGAEE-NWSIHRAPPSYEEQSNSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGK 142

Query: 175 STLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           +  +    R+   +     + + VGER RE  +F  +    N+  K  +V    +E P  
Sbjct: 143 TVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGN 202

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+
Sbjct: 203 RLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 262

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP 
Sbjct: 263 GVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPA 320

Query: 351 VDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR  D     +E   +   +   + R++E +DI  I G     +      V +
Sbjct: 321 VDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILGMDELSEED-KLVVAR 379

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 380 ARKIERFLSQP 390


>gi|17224749|gb|AAL37096.1| ATP synthase beta subunit [Trichopus zeylanicus]
          Length = 475

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V Q  N D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVQ--NRDTAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMXVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|257853476|gb|ACV71740.1| ATP synthase beta subunit [Stawellia dimorphantha]
          Length = 479

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|228016707|gb|ACP51535.1| ATP synthase CF1 beta subunit [Pinus aristata]
          Length = 492

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G +V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMIVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVD-ARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|110835587|ref|YP_694446.1| F0F1 ATP synthase subunit beta [Alcanivorax borkumensis SK2]
 gi|118573503|sp|Q0VKX4|ATPB_ALCBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110648698|emb|CAL18174.1| ATP synthase, beta subunit [Alcanivorax borkumensis SK2]
          Length = 460

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 189/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V    + V  + D +   G  +    Q  ++   +V    +G  E
Sbjct: 1   MSSGRIVQIIGAVIDVEFPREAVPKVYDALSVDGTETTLEVQ-QQLGDGVVRTIAMGSTE 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   ++       GR+++ LG+PID    +G+ +  M I    P   ++
Sbjct: 60  GLKRGLGVTDNGEPIQVPVGTKTLGRIMDVLGRPIDEAGPIGEEE-RMPIHRAAPTYADQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AATNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  + L+R +A +G YP +DPL S SR  D      +   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDSTVSLSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ RF+E +DI  I G     +      V +   I  +L Q 
Sbjct: 357 RGVQTVLQRFKELKDIIAILGMDELSEDD-KLIVSRARKIERYLSQP 402


>gi|5758890|gb|AAD50864.1| ATP synthase beta subunit [Helmholtzia acorifolia]
          Length = 496

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|312971976|ref|ZP_07786150.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70]
 gi|310334353|gb|EFQ00558.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70]
          Length = 441

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|170178328|gb|ACB10583.1| ATP synthase beta subunit [Cornus oligophlebia]
          Length = 454

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  G  I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 11  KGRDTAGHPINVTCEVPQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 308 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|169335794|ref|ZP_02862987.1| hypothetical protein ANASTE_02219 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258532|gb|EDS72498.1| hypothetical protein ANASTE_02219 [Anaerofustis stercorihominis DSM
           17244]
          Length = 470

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 11/385 (2%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACW 101
            L + +       + + +V     D  V    +   + +  G      G    +      
Sbjct: 27  KLNEAIKIDNHGEELIIEVSEHIGDNTVRCIAMDTTDGLVRGMEAVSTGSPIMVPVGDKT 86

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GR++N LG+PIDG +          I  + P     Q V + F+TGI+V+D+  P   G
Sbjct: 87  LGRMVNVLGQPIDGKEMDLSDVKLSPIHREAPSFEEMQTVPEIFETGIKVVDLICPYTKG 146

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKS 217
            +IG+F G+G+GK+ L+     +   +     + + VGER RE  +   +     +  K+
Sbjct: 147 GKIGLFGGAGVGKTVLIQELISNIATEHGGLSVFAGVGERTREGNDLYYEMKESGVLDKT 206

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276
            +     +E P  R    LT +T+AE+F  +   +VLL +D+I RF  +  E++   G +
Sbjct: 207 SLCFGQMNEPPGARMRVALTGLTMAEHFRDEENQDVLLFIDNIFRFTQAGSEVSALLGRM 266

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD   
Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R+++E+G YP VDPL S SR+ D      +  ++   +  ++ R++E +DI  I G 
Sbjct: 325 VLDRAISEKGIYPAVDPLGSTSRILDPKVVGEEHYQIARGVQEILQRYKELQDIIAILGM 384

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
               +      V +   I  FL Q 
Sbjct: 385 EELSEED-KLIVGRARRIERFLSQP 408


>gi|112791348|gb|ABI21944.1| ATP synthase beta subunit [Salmonella sp. ICMP 15669]
          Length = 421

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNEKLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|75333248|sp|Q9BA85|ATPB_NYPFR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236728|gb|AAK14669.1| ATP synthase beta subunit [Nypa fruticans]
          Length = 498

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708640|emb|CAB90007.1| ATP synthase beta subunit [Saxifraga retusa]
          Length = 491

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDIVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMDVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|71018215|ref|XP_759338.1| hypothetical protein UM03191.1 [Ustilago maydis 521]
 gi|46099188|gb|EAK84421.1| hypothetical protein UM03191.1 [Ustilago maydis 521]
          Length = 523

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/399 (28%), Positives = 184/399 (46%), Gaps = 19/399 (4%)

Query: 51  HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINAL 109
             G     L     +  + V    +   E +  G  V   G   +I       GR++N +
Sbjct: 86  VTGGGRLVLEVAQHLGENTVRAIAMEGTEGLVRGQKVVDTGLPIQIPVGPGTLGRIMNVI 145

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    + KG+    I  + P  +++    +  +TGI+V+D+  P   G +IG+F G
Sbjct: 146 GEPMDERGPI-KGNKLAPIHVEPPAFVDQSTKAEVLETGIKVVDLLAPYARGGKIGLFGG 204

Query: 170 SGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVV 220
           +G+GK+ L+     +        S+   VGER RE  +   + +       +   K  +V
Sbjct: 205 AGVGKTVLIQELINNVAKAHGGYSVFTGVGERTREGNDLYHEMIETGVINLEGDSKVALV 264

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVA 279
               +E P  R    LT +TIAEYF  +   +VLL +D+I RF  +  E +   G +P A
Sbjct: 265 FGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSETSALLGRIPSA 324

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            GY  ++ +++  + ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+
Sbjct: 325 VGYQPTLATDMGVMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLS 382

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           R +AE G YP VDPL S SR+ D A    +   + + +  L+  ++  +DI  I G    
Sbjct: 383 RGIAELGIYPAVDPLDSKSRMLDPAVVGREHYDIATGVQKLLQDYKSLQDIIAILGMDEL 442

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
            +      V +   I  F+ Q     +   VF  I  KL
Sbjct: 443 SEED-KLTVERARKIQRFMSQP---FAVAQVFTGIEGKL 477


>gi|306991567|pdb|2XND|D Chain D, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991568|pdb|2XND|E Chain E, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
 gi|306991569|pdb|2XND|F Chain F, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp
           Synthase
          Length = 467

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/430 (26%), Positives = 192/430 (44%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I ++      V        + + +  QG+ +  + +V   +    V    +   E 
Sbjct: 1   TTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   RI       GR++N +G+PID    + K      I ++ P  +   
Sbjct: 61  LVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFVEMS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 120 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 179

Query: 197 ERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  + 
Sbjct: 180 ERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQE 239

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT
Sbjct: 240 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSIT 297

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      
Sbjct: 298 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGS 357

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q        
Sbjct: 358 EHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQVA 413

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 414 EVFTGHLGKL 423


>gi|183206638|gb|ACC54517.1| ATP synthase beta subunit [Wahlenbergia berteroi]
          Length = 462

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 117/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D LG+ I +  ++        V    
Sbjct: 3   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGEPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+ ID    +  G  S  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGETIDNLGPVDTGTTS-PIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA  G YP VDPL S S + 
Sbjct: 298 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAXXGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  +   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYETAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|7688417|emb|CAB89734.1| ATP synthase beta subunit [Verbena scabrido-glandulosa]
          Length = 442

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ + +  +         V    +   + ++ G  V   G    +       GR
Sbjct: 8   KGRDTVGQPMNVACEEQQLLGNNRVRAVAMSATDVLTRGMEVIDTGAPLSVPVGGATLGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 68  IFNVLGEPVDNLGPVD-TRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 126

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 127 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 186

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 187 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 246

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 247 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 304

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 305 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 364

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 365 ILGLDELSEED-RLTVARARKIERFLSQP 392


>gi|256370203|ref|YP_003107714.1| ATP synthase subunit B [Brucella microti CCM 4915]
 gi|256000366|gb|ACU48765.1| ATP synthase subunit B [Brucella microti CCM 4915]
          Length = 521

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 183/411 (44%), Gaps = 19/411 (4%)

Query: 25  YISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           +I+ +      V     Q   + + +    +    + +V   +  D V    +   E + 
Sbjct: 54  HITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLV 113

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G           +       GR++N +G+P+D    + K   +  I    P  + +   
Sbjct: 114 RGQEARDTSEPIMVPVGVETLGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTE 172

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 173 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232

Query: 199 GREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +   + +        G    K+ +V    +E P  R    L+ +T+AE F  +G 
Sbjct: 233 TREGNDLYHEMIESGVNKLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT+V
Sbjct: 293 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VDPL S SR+ D      + 
Sbjct: 351 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEH 410

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 411 YAVARQVQSILQRYKALQDIIAILGMDELSEED-KLTVARARKIERFLSQP 460


>gi|170024619|ref|YP_001721124.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis YPIII]
 gi|169751153|gb|ACA68671.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII]
          Length = 472

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 160/468 (34%), Positives = 241/468 (51%), Gaps = 34/468 (7%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--- 56
           + + L +L +  E  S+   + + G ++  T +    T L   + LG   + +  N    
Sbjct: 5   LSRWLTSLDKFEERISQTTTIRRYGRLTRATGLVLEATGL--QLPLGATCLIERHNGGEV 62

Query: 57  -DNLGQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRF------------------ 93
            +   +V+  N   +++ P+   E I  G  V+      G                    
Sbjct: 63  QEVESEVVGFNGQHLFLMPLEDVEGIVPGARVYARVTTSGTSASKQSISSKQSIPSKQSF 122

Query: 94  ---RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
              ++       GRV++   KP+DG  +  +      +++     + R  + +    G+R
Sbjct: 123 ASKQLPLGPELLGRVLDGSAKPLDGLPA-PETGYRAPLITPPINPLQRTAIVQVLDVGVR 181

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210
            I+    +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ L
Sbjct: 182 TINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENIL 241

Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
           G +   +SVV+ A +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REI
Sbjct: 242 GAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREI 301

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329
           A   GE P  +GYP SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R
Sbjct: 302 ALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSAR 361

Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
           +ILDGH+VL+R LAE G YP +D  AS+SR        D    V     L   ++  RD+
Sbjct: 362 AILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLFASYQRNRDL 421

Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             +G Y  G D +LDKA+   P +  FL+Q   + SS D   +  K L
Sbjct: 422 VSVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFDDACQHLKGL 469


>gi|89242526|gb|ABD64621.1| ATPase beta subunit [Cananga odorata]
          Length = 436

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVINEQNIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|33440414|gb|AAQ19115.1| ATPase alpha subunit [Cymodocea serrulata]
 gi|114509190|gb|ABI75163.1| ATPase alpha subunit [Cymodocea serrulata]
          Length = 367

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 155/368 (42%), Gaps = 19/368 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 4   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGRVVDALGVPID 63

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 64  GRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 122

Query: 175 -----------STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                        L +M    +     +   +G++   V + ++     N  + S++V A
Sbjct: 123 TAIAVDTILNQKELNAMAKEENAKLYCVYVAIGQKRSTVAQLVQILSSANALEYSILVAA 182

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 183 TASDPAPLQFLAPYSGCALGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 242

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER     +E   G++TA+  +     + +  I  +V  I DG I L  
Sbjct: 243 PGDVFYLHSRLLERAVKRSEETGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLET 302

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 303 ELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VAAFAQFGSDLD 359

Query: 401 LILDKAVH 408
                 ++
Sbjct: 360 AATQALLN 367


>gi|7708442|emb|CAB90105.1| ATP synthase beta subunit [Fouquieria columnaris]
          Length = 477

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G+N   +GQ I +  ++        V    
Sbjct: 7   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRN--TVGQPINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       G++ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVSDTGAPLSVPVGGATLGQIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|282861128|ref|ZP_06270193.1| ATP synthase F1, alpha subunit [Streptomyces sp. ACTE]
 gi|282563786|gb|EFB69323.1| ATP synthase F1, alpha subunit [Streptomyces sp. ACTE]
          Length = 523

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 88/432 (20%), Positives = 165/432 (38%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALDNFVQSYQPDAASREEVGTVSVAGDGIAKVEGL-PSAQANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQSVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D   P+  GQR  +      GK+ L     
Sbjct: 128 ESRRALELQAPGVMVRKSVHEPMQTGYKAVDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYAGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDLGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + ++ E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQYRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ+ 
Sbjct: 425 GKRMVELLKQAQ 436


>gi|221078763|gb|ACL99456.1| ATP synthase beta subunit [Diospyros sandwicensis]
          Length = 465

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVSQPINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 61  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|219552246|gb|ACL26838.1| ATP synthase beta chain [Phyllanthus tenellus]
          Length = 423

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I+ I      V     Q   + + +V +G+++         +V ++  +  V    + 
Sbjct: 1   GRIAQIIGPVLDVAFPPGQMPNIYNALVVKGQDTAGQQIYVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 61  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDELGPVD-TRTTSPIHRSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|194335228|ref|YP_002017022.1| ATP synthase F1, beta subunit [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|226740658|sp|B4SAN6|ATPB_PELPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194307705|gb|ACF42405.1| ATP synthase F1, beta subunit [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 462

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 117/428 (27%), Positives = 195/428 (45%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     +   + D +     +   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGRLPSILDALTVTRADGTKL--VLETQQHLGEERVRTVAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V H G+  ++       GR++N +G PIDG   +     S  I    P 
Sbjct: 59  ESTDGLVRGMNVTHTGKPIQVPVGLEVLGRMLNVVGDPIDGRGPVN-TKKSYSIHRLAPR 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +    +    +
Sbjct: 118 FDEISTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   + +    + K+ +V    +E P  R+   LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEEG 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI     +KG++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRI--VSTKKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  L+ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYDTAQAVKQLLQRYKDLQDIIAILGMDELSDED-KLVVSRARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|312285207|gb|ADQ64345.1| ATP synthase beta subunit [Chasmanthera welwitschii]
 gi|312285239|gb|ADQ64361.1| ATP synthase beta subunit [Leptoterantha mayumbensis]
 gi|312285243|gb|ADQ64363.1| ATP synthase beta subunit [Odontocarya tripetala]
 gi|312285245|gb|ADQ64364.1| ATP synthase beta subunit [Odontocarya truncata]
          Length = 469

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D  GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|269101119|ref|YP_003289267.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus]
 gi|266631627|emb|CAV31298.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus]
 gi|270118757|emb|CAT18848.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus]
          Length = 481

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/416 (27%), Positives = 185/416 (44%), Gaps = 20/416 (4%)

Query: 21  VQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           +  GYI+ +   V   V        + + +  QGK    + +V ++  D  V    +   
Sbjct: 12  INSGYITQVIGPVIDAVFSSGILPKIYNALEVQGKEGPIICEVQQLLGDNRVRAIAMSAT 71

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D   +   G+ ++ I    P   +
Sbjct: 72  DGLQRGVTVIDMKSPISVPVGKPTLGRIFNVLGQPVDDLSA-SVGEETLPIHRPAPAFTD 130

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
            +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 131 LETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 190

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 191 VGERTREGNDLYMEMKESGVINEKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 250

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G
Sbjct: 251 DINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTNQG 308

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 309 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLI 368

Query: 366 SAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D   K    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 VGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEED-RLVVDRARKIERFLSQP 423


>gi|170767133|ref|ZP_02901586.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia albertii TW07627]
 gi|170124571|gb|EDS93502.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia albertii TW07627]
          Length = 446

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 156/406 (38%), Positives = 225/406 (55%), Gaps = 7/406 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I++I               +G F  ++ +    L +VI IN D V++ P      +  
Sbjct: 36  GKITNIGGTIIKARL--PKARIGAF--YKIEPGQRLAEVIAINEDEVFLLPFEHVSGMYC 91

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  + + G  F+I       GR+++ +G+P+  +           + ++ P  + RQ ++
Sbjct: 92  GQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNIDALYLPFERSLYAEPPDPLLRQVID 151

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           + F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERGREV
Sbjct: 152 QPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERGREV 211

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVLL++DS+TR+
Sbjct: 212 NEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSVTRY 271

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN ND
Sbjct: 272 ARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDNVND 329

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PI D VRSILDGHIVL R LAEE  +P +D   S SR+      ++  +  +    LI  
Sbjct: 330 PIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKLIAT 389

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++    +  IG Y  G D   DKA+     I  F++QS  D+SS +
Sbjct: 390 YKNIELLIRIGEYTVGQDPEADKAIKNRKAIQSFIQQSTKDISSYE 435


>gi|56675903|emb|CAB89964.2| ATP synthase beta subunit [Punica protopunica]
          Length = 478

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       G+
Sbjct: 40  KGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTGAPLSVPVGGATLGQ 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K   V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 219 ESKVXXVYGQMNEPPGARMRXGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGXMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|21633297|gb|AAM52123.1| ATP synthase beta subunit [Ipomoea pes-tigridis]
          Length = 490

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVVDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|62085232|gb|AAX63018.1| ATP synthase beta subunit [Ruptiliocarpon caracolito]
          Length = 490

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMEVIDMGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|228016078|gb|ACP50916.1| ATP synthase CF1 beta subunit [Pinus rzedowskii]
          Length = 492

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G +V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMIVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVD-ARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|303273232|ref|XP_003055977.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
 gi|226462061|gb|EEH59353.1| H+-or Na+-translocating f-type, v-type and A-type ATPase
           superfamily [Micromonas pusilla CCMP1545]
          Length = 534

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 181/413 (43%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        +   +   G     + +V   +  + V    +   E + 
Sbjct: 65  GRVTQVIGAVVDVQFDGDLPPIMSALEVDGHEIRLVLEVAQHLGENTVRTIAMDTTEGLV 124

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G   ++       GR++N +G+PID    +     S+ I  + PP +++   
Sbjct: 125 RGQGVLNTGNPIQVPVGRATLGRIMNVIGEPIDECGPIETAS-SLAIHREAPPFVDQSTE 183

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +         + + VGER
Sbjct: 184 MEMLVTGIKVVDLLAPYQKGGKIGLFGGAGVGKTVFIMELINNIAKGHGGFSVFAGVGER 243

Query: 199 GREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
            RE  +   + +              K  +V    +E P  R    LT +T+AEYF    
Sbjct: 244 TREGNDLYHEMIEGGVIKLGAQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFE 303

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT
Sbjct: 304 GQDVLLFVDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTMKGSIT 361

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+    A   
Sbjct: 362 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRMLSPLALGD 421

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +  ++  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 422 EHYATARGVQKVLQDYKNLQDIIAILGMDELSEED-KMTVSRARKVQRFLSQP 473


>gi|157285185|gb|ABV31332.1| ATPase [Vibrio ezurae]
 gi|157285193|gb|ABV31336.1| ATPase [Vibrio ezurae]
 gi|157285309|gb|ABV31394.1| ATPase [Vibrio ezurae]
          Length = 441

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 170/407 (41%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---KYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPINAA-LTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDAMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDTTKKQLDHGAKVTELMKQKQ 399


>gi|158602265|gb|ABW74599.1| ATP synthase beta subunit [Delphinium tricorne]
          Length = 478

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGE--DTIGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGAKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++  V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQPVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|6467942|gb|AAF13241.1|AF197608_1 ATPase beta subunit [Anemopsis californica]
          Length = 487

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLTRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|23503637|dbj|BAC20415.1| ATP synthase beta-subunit [Rusalka fusiformis]
          Length = 376

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    +  G+ ++ I  +
Sbjct: 1   VSMQQTDGLMRGMEVIDTGKPLSVPVGRDTLGRIFNVLGEPVDNLGPVKTGE-TLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLTESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYATAQTVKKTLQRYKELQDIIAILGLDELSEED-RLVVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|416680|sp|Q03235|ATPB_PECFR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|581446|emb|CAA45841.1| ATPase (beta-subunit) [Pectinatus frisingensis]
          Length = 470

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDN----LGQVIRINLD-IVYICPVGI 77
           G I  +      +   ++ +  + + +  +GK+ D       +V++   D I     +  
Sbjct: 4   GKIVQVIGPVVDIEFPAEELPSILNAITIKGKSGDIDINLTVEVMQHLGDGITRCIAMSS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + ++ G      G   ++       GRV N LG+ +D + +         I    P   
Sbjct: 64  TDGLTRGMEAVDTGSPIKVPVGEETLGRVFNVLGQTVDHNPAPVGNKEFWPIHRPAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            ++   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + S
Sbjct: 124 EQETSTQILETGIKVVDLIAPYSRGGKIGLFGGAGVGKTVLIMELIHNIATQHGGYSVFS 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF   +  +
Sbjct: 184 GVGERTREGNDLWSEMTESGVINKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQHQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V 
Sbjct: 244 VLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D  
Sbjct: 302 AVYVPADDLTDPGPAATFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPHVIGEDHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 EVARGVQAVLQKYKELQDIIAILGMEELSDAD-KLTVARARKIQRFLSQP 410


>gi|62902813|gb|AAY19321.1| ATP synthase beta subunit [Lepidobotrys staudtii]
          Length = 480

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 4   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMS 63

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 64  ATDGLMRGMEVIDMGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 122

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 123 IQLDSKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 182

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 183 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 242

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 243 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 300

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 301 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 360

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 RIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|303232561|ref|ZP_07319247.1| ATP synthase F1, alpha subunit [Atopobium vaginae PB189-T1-4]
 gi|302481348|gb|EFL44422.1| ATP synthase F1, alpha subunit [Atopobium vaginae PB189-T1-4]
          Length = 551

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/440 (22%), Positives = 175/440 (39%), Gaps = 31/440 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDN 58
           +++ L  ++   +    +LVV+      +      +  L +    G+ +           
Sbjct: 14  LREQLSQISDTVDRQQASLVVE------VGDGIAYINGL-KSAMAGELLQFTSSSSGKSV 66

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G    ++ D +     G    I  GD     G    I       GRV+N LG+PIDG  
Sbjct: 67  YGLAQNLDEDQIGAVLFGDVNSIREGDECRTTGHVMDIPVGHAMLGRVVNPLGEPIDGLG 126

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        I  K P  M RQ V +  +TG+  ID   P+  GQR  +      GK+ +
Sbjct: 127 VIPTT-HRRPIEFKAPGIMERQPVCEPVQTGLVAIDAMVPIGRGQRELIIGDRKTGKTAI 185

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
              S+  + +     I   +G++   V           +  K+++V AT+ +S  L+ +A
Sbjct: 186 AIDSIVNQKNSDTICIYVAIGQKASTVAAIRHVLKDKGVLDKTIIVAATAADSAPLQYIA 245

Query: 235 PLTAVTIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGY 282
           P+    I EYF                 +VL+I D +++ A + R+++      P    Y
Sbjct: 246 PMAGAAIGEYFMYNDKNGHPADATHPGGHVLVIYDDLSKQAVAYRQMSLTLHRPPGREAY 305

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  +F    RLLER      E   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 306 PGDIFYLHSRLLERACKLSDELGAGSLTALPIIETQEGDVSAYIPTNVISITDGQIYLQS 365

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L  +G+ P VD   SVSR+   A     K++  +L   +  + E +       +   +D
Sbjct: 366 NLFFQGQRPAVDVGISVSRVGGAAQIKAMKQVAGTLRLDLASYREKQ---AFSQFGSDLD 422

Query: 401 LILDKAVHQVPIIYDFLKQS 420
                 ++    + + LKQ 
Sbjct: 423 ATTQYQLNHGAHMTELLKQP 442


>gi|301019812|ref|ZP_07183955.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1]
 gi|312967858|ref|ZP_07782070.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75]
 gi|299882071|gb|EFI90282.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1]
 gi|312287419|gb|EFR15327.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75]
 gi|320180086|gb|EFW55028.1| ATP synthase beta chain [Shigella boydii ATCC 9905]
 gi|323161016|gb|EFZ46935.1| ATP synthase F1, beta subunit [Escherichia coli E128010]
 gi|323167006|gb|EFZ52745.1| ATP synthase F1, beta subunit [Shigella sonnei 53G]
 gi|323177752|gb|EFZ63336.1| ATP synthase F1, beta subunit [Escherichia coli 1180]
 gi|323189535|gb|EFZ74815.1| ATP synthase F1, beta subunit [Escherichia coli RN587/1]
 gi|332084755|gb|EGI89941.1| ATP synthase F1, beta subunit [Shigella dysenteriae 155-74]
 gi|332089325|gb|EGI94429.1| ATP synthase F1, beta subunit [Shigella boydii 3594-74]
 gi|332751757|gb|EGJ82155.1| ATP synthase F1, beta subunit [Shigella flexneri 2747-71]
 gi|332995979|gb|EGK15606.1| ATP synthase F1, beta subunit [Shigella flexneri VA-6]
 gi|333013459|gb|EGK32830.1| ATP synthase F1, beta subunit [Shigella flexneri K-304]
 gi|333013706|gb|EGK33071.1| ATP synthase F1, beta subunit [Shigella flexneri K-227]
          Length = 435

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|241912888|gb|ACS72122.1| AtpB [Prescottia stachyodes]
          Length = 489

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V + +  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIKSQ--DTIGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPV-HIRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLNVARARKIERFLSQP 426


>gi|224830520|gb|ACN66355.1| ATP synthase beta chain [Cocculus pendulus]
          Length = 444

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 2   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 59

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 60  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 118

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 119 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 178

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 179 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 239 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 297 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 356

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|18033073|gb|AAL56978.1|AF326330_1 ATP synthase [Avibacterium gallinarum]
          Length = 431

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 173/371 (46%), Gaps = 14/371 (3%)

Query: 60  GQVIR----INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPID 114
           G V+     +   IV    +G  + +  G  V +      +       GR++N LG+PID
Sbjct: 24  GLVLEVQQQLGGGIVRCIAMGSSDGLKRGLSVSNTAKPISVPVGTKTLGRIMNVLGEPID 83

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +G  + +  I    P   ++    +  +TGI+VID+  P   G ++G+F G+G+GK
Sbjct: 84  EQGPIGAEE-TWSIHRPAPSYEDQANSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGK 142

Query: 175 STLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
           +  +    R+   +     + + VGER RE  +F  +    N+  K  +V    +E P  
Sbjct: 143 TVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGN 202

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R    LT +T+AE F  +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+
Sbjct: 203 RLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM 262

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP 
Sbjct: 263 GALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPA 320

Query: 351 VDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR  D      +   +   +     R+ E +DI  I G     +      V +
Sbjct: 321 VDPLDSTSRQLDPLVVGQEHYDVARGVQGTYKRYRELKDIIAILGMDELSEED-KLVVAR 379

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 380 ATKIERFLSQP 390


>gi|110915672|gb|ABH02624.1| ATP synthase beta subunit [Molineriella laevis]
          Length = 475

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 37  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPVD 96

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 97  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 155

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 156 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 215

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 216 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 275

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 276 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 333

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 334 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 393

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 394 D-RLTVARARKIERFLSQP 411


>gi|157285039|gb|ABV31259.1| ATPase [Vibrio fluvialis]
 gi|157285041|gb|ABV31260.1| ATPase [Vibrio fluvialis]
 gi|157285243|gb|ABV31361.1| ATPase [Vibrio fluvialis]
          Length = 441

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G+ V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RFALALNLERDSVGAVVMGPYADLKEGEKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   L    L+  +    P  ++RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPLNAT-LTSPVEVIAPGVIDRQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  K ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALKNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E         +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYREL---AAFAQFSSDLDDATKRQLEHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|75333259|sp|Q9BA96|ATPB_CHAHU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236698|gb|AAK14654.1| ATP synthase beta subunit [Chamaerops humilis]
          Length = 498

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   + +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RETVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4063558|gb|AAC98337.1| ATP synthase beta subunit [Pelargonium cotyledonis]
          Length = 456

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           +  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  QGRDTVGQEIHVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQKVS 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       D   ++   +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDQHYEIAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|37720975|gb|AAN32490.1| ATP synthase beta subunit [Xiphidium caeruleum]
          Length = 489

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 71  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRITSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|324986447|ref|YP_004276318.1| ATP synthase CF1 beta subunit [Pinus monophylla]
 gi|323522542|gb|ADX94884.1| ATP synthase CF1 beta subunit [Pinus monophylla]
          Length = 492

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G +V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMIVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVD-ARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|7708562|emb|CAB89953.1| ATP synthase beta subunit [Pterocarya fraxinifolia]
          Length = 486

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       G++ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGASLSVPVGGATLGQIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718017|gb|AAK72750.1| ATP synthase beta subunit [Colchicum speciosum]
          Length = 483

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 182/412 (44%), Gaps = 24/412 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIGEEIS 82
           I  V   V    +   + + +V +G+++     +   +V ++  +  V    +   + ++
Sbjct: 20  IGPVLDVVFSPGRMPNIYNALVVKGRDTVGQQNNVTCEVQQLLGNNRVRAVAMSATDGLT 79

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +     +  I    P  +     
Sbjct: 80  RGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTK 138

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   ER
Sbjct: 139 LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGER 198

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 199 TREGNDLYMEMKESGVINEKNITDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNE 258

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 259 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITS 316

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        +
Sbjct: 317 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEE 376

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 377 HYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|55056914|emb|CAF21958.1| ATP synthase beta subunit [Cycas taiwaniana]
          Length = 442

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 19  KGKDTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLKRGMKVIDTGAPLSVPVGGATLGR 78

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N +G+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 79  IFNVIGEPVDNLGPVD-ARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 137

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL------- 214
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +     +       
Sbjct: 138 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDIS 197

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+A         +VLL +D+I RF  +  E++  
Sbjct: 198 GSKVALVYGQMNEPPGARMRVGLTALTMAXXXXXXXEQDVLLFIDNIFRFVQAGSEVSAL 257

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 258 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 315

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 316 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 375

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 376 ILGLDELSEED-RLTVARARKIERFLSQP 403


>gi|296217690|ref|XP_002755124.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like
           [Callithrix jacchus]
          Length = 529

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHTEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 NVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I  F  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFGFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+ ++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSCAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V     I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDKLSEED-KLTVSHARKIQRFLSQP 467


>gi|293399933|ref|ZP_06644079.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306333|gb|EFE47576.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 466

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 116/414 (28%), Positives = 195/414 (47%), Gaps = 18/414 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL----GQVIRINLDIVYIC 73
           +    G I  +      V   +  +  L   +    KN D+L     Q I    + V   
Sbjct: 1   MSKNTGKIVQVIGPVVDVAFENGELPQLLSAIEIPLKNQDSLIVEVAQHIG--DERVRCI 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +G  + +  G      G   ++       GR+ N LG+ IDG   + K    + I  K 
Sbjct: 59  AMGGTDGLVRGMDAIDTGAPIQVPVGDEVLGRMFNVLGREIDGLGEV-KTSKRLPIHRKA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P    +Q   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    
Sbjct: 118 PSFDEQQTSAEMLETGIKVIDLLCPYSKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGK 177

Query: 191 -IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
            +++ VGER RE  +   +     +  K+V+V    +ESP  R    LT +T+AEYF   
Sbjct: 178 SVVTGVGERTREGNDMYHEMKDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEYFRDV 237

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  + G+I
Sbjct: 238 EHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKDGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ D     
Sbjct: 296 TSVQAIYVPADDLTDPAPATAFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVG 355

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++   +  ++ R++E +DI  I G     +      V++   + +FL Q 
Sbjct: 356 EEHYEVARGVQQILQRYKELQDIIAILGMDELSEED-KIIVNRARRVRNFLSQP 408


>gi|258623013|ref|ZP_05718027.1| ATP synthase subunit B [Vibrio mimicus VM573]
 gi|258625009|ref|ZP_05719932.1| ATP synthase subunit B [Vibrio mimicus VM603]
 gi|262166762|ref|ZP_06034499.1| ATP synthase beta chain [Vibrio mimicus VM223]
 gi|262172741|ref|ZP_06040419.1| ATP synthase beta chain [Vibrio mimicus MB-451]
 gi|258582707|gb|EEW07533.1| ATP synthase subunit B [Vibrio mimicus VM603]
 gi|258584716|gb|EEW09451.1| ATP synthase subunit B [Vibrio mimicus VM573]
 gi|261893817|gb|EEY39803.1| ATP synthase beta chain [Vibrio mimicus MB-451]
 gi|262026478|gb|EEY45146.1| ATP synthase beta chain [Vibrio mimicus VM223]
          Length = 467

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 181/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V   K    L    ++   ++    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I    P    
Sbjct: 61  DGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEV-YSIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +     +         K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDVARGVQATLQRYKELKDIIAILGMDELSEAD-KQVVARARKIERFLTQP 411


>gi|157285209|gb|ABV31344.1| ATPase [Vibrio diabolicus]
          Length = 441

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  ++  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKMTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQIGKTALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALQNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|37720967|gb|AAN32486.1| ATP synthase beta subunit [Philydrum lanuginosum]
          Length = 497

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|13236792|gb|AAK14701.1| ATP synthase beta subunit [Dictyosperma album]
          Length = 498

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MNATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|32815653|gb|AAP88223.1| ATP synthase beta subunit [Platycarya strobilacea]
          Length = 457

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTTGQQINVTCEVQQLLGNNRVKAVAMSATDGLMRGMEVIDTGVSLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
            +F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 XLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|4206606|gb|AAD11734.1| ATP synthase beta subunit [Glycosmis pentaphylla]
          Length = 487

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 19  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVACEVQQLLGNNRVRAVAMS 78

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 79  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 137

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 138 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 197

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 198 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 257

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 258 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 315

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 316 EGSITSIQAVYVPADDLTDPAPAXTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 375

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|323715466|gb|ADY04801.1| ATP synthase beta subunit [Deutzia setchuenensis]
          Length = 486

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V + +++     +   +V ++  +  V    + 
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKSQDTASQPINVTCEVQQLLGNNRVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P  
Sbjct: 70  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRCAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 129 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 189 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 RIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|290475706|ref|YP_003468595.1| flagellum-specific ATP synthase [Xenorhabdus bovienii SS-2004]
 gi|289175028|emb|CBJ81831.1| flagellum-specific ATP synthase [Xenorhabdus bovienii SS-2004]
          Length = 454

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 165/447 (36%), Positives = 243/447 (54%), Gaps = 18/447 (4%)

Query: 5   LETLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           L TL  L +   K   V + G ++  T +    T +   + LG   + + +N   + +V 
Sbjct: 9   LATLDSLEKRLEKTPRVRRYGRLTRATGLVLEATGI--QMPLGATCLIERQNGSTVEEVE 66

Query: 64  ----RINLDIVYICPVGIGEEISLGDLVFH--------WGRFRISPSACWCGRVINALGK 111
                 N + + + P+   E I  G  V+          GR R+       GRV++  G+
Sbjct: 67  SEVVGFNGEKLLLMPLEELEGIVPGARVYARSYGEDSAGGR-RLPLGTELLGRVLDGSGR 125

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
           P+DG  +   G     + +     + R  +      G+R I+    +  GQR+G+FAGSG
Sbjct: 126 PLDGFPAPDTG-YRALLTTPPINPLQRTPISDVLDVGVRAINSLLTVGRGQRMGLFAGSG 184

Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           +GKS LL M AR    D +++ L+GERGREV++FIE+ LG + L +SVVV A +D SP+L
Sbjct: 185 VGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGVEGLARSVVVAAPADVSPLL 244

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R      A  IAE F  +G +VLLI+DS+TR++ + REIA   GE P  +GYP SVF++L
Sbjct: 245 RMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAKL 304

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           P L+ER G    + G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+RSLAE G YP 
Sbjct: 305 PALVERAGNGVSDGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPA 364

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           +D  AS+SR        D  + V     L+  ++  RD+  +G Y  G D +LD+A+   
Sbjct: 365 IDIEASISRAMTSLIDNDHYRRVQQFKQLLASYQRNRDLINVGAYAAGSDPLLDRAIQLY 424

Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437
           P +  FL+Q  S+ S  D      ++L
Sbjct: 425 PHMAQFLQQGMSERSEYDAACIQLQQL 451


>gi|110915690|gb|ABH02633.1| ATP synthase beta subunit [Puccinellia distans]
          Length = 471

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 33  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 92

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 93  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 151

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 152 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 211

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 212 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 271

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 272 QPTLSTEMGSLQERIA--SXKKGSITSIQAVYVPADDLTDPAPATTFAHLDAXTVLSRGL 329

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 330 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 389

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 390 D-RLTVARARKIERFLSQP 407


>gi|157285081|gb|ABV31280.1| ATPase [Vibrio splendidus]
 gi|157285083|gb|ABV31281.1| ATPase [Vibrio splendidus]
 gi|157285145|gb|ABV31312.1| ATPase [Vibrio splendidus]
 gi|157285149|gb|ABV31314.1| ATPase [Vibrio tasmaniensis]
 gi|157285151|gb|ABV31315.1| ATPase [Vibrio tasmaniensis]
 gi|157285153|gb|ABV31316.1| ATPase [Vibrio cyclitrophicus]
 gi|157285175|gb|ABV31327.1| ATPase [Vibrio cyclitrophicus]
 gi|157285181|gb|ABV31330.1| ATPase [Vibrio kanaloae]
 gi|157285217|gb|ABV31348.1| ATPase [Vibrio tasmaniensis]
 gi|157285311|gb|ABV31395.1| ATPase [Vibrio cyclitrophicus]
 gi|289498321|gb|ADC99199.1| ATP synthase F1 alpha subunit [Vibrio splendidus]
 gi|289498339|gb|ADC99208.1| ATP synthase F1 alpha subunit [Vibrio kanaloae]
 gi|289498385|gb|ADC99231.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498387|gb|ADC99232.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498389|gb|ADC99233.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498391|gb|ADC99234.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498393|gb|ADC99235.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498395|gb|ADC99236.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498397|gb|ADC99237.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498399|gb|ADC99238.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
 gi|289498401|gb|ADC99239.1| ATP synthase F1 alpha subunit [Vibrio cyclitrophicus]
          Length = 441

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 177/420 (42%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|112791342|gb|ABI21941.1| ATP synthase beta subunit [Shigella flexneri]
 gi|112791346|gb|ABI21943.1| ATP synthase beta subunit [Escherichia coli DSM 30083]
          Length = 421

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|75328452|sp|Q85V50|ATPB_PSECV RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30351885|emb|CAD48094.1| ATP synthase beta subunit [Pseudogaltonia clavata]
          Length = 495

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIYNIAKAHGGVS 197

Query: 194 LVGE---RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G    R RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGVRTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758902|gb|AAD50876.1| ATP synthase beta subunit [Orchidantha siamensis]
          Length = 496

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +      + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLEIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNVGKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRLVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGEKHYEIAQRVKQTSQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|289498379|gb|ADC99228.1| ATP synthase F1 alpha subunit [Vibrio crassostreae]
          Length = 439

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 94/406 (23%), Positives = 171/406 (42%), Gaps = 25/406 (6%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
             ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   GR
Sbjct: 1   ILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGR 56

Query: 93  F-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
              +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + 
Sbjct: 57  ILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEIIAPGVIDRKSVDQPVQTGYKS 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDY 209
           +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +   
Sbjct: 116 VDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKL 175

Query: 210 LGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
                   +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+
Sbjct: 176 EEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQ 235

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLV 315
           I+      P    +P  VF    RLLER     +               G++TA+  +  
Sbjct: 236 ISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEHYVEEFTKGEVKGKTGSLTALPIIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   
Sbjct: 296 QAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGG 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 IRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ 398


>gi|197122869|ref|YP_002134820.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
 gi|196172718|gb|ACG73691.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K]
          Length = 452

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 155/407 (38%), Positives = 229/407 (56%), Gaps = 7/407 (1%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEI 81
            G +  + +    V  L   V +G       ++    L +VI        + P+   + +
Sbjct: 22  TGTV--VRAAGLLVEALLPQVPVGTACEIHAQDGAVVLAEVIGFQGGTARLMPLSGIQGV 79

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V       RI+      GRV++A  +P+DG  ++        + +  PPA++R+R
Sbjct: 80  AEGCAVVPRASADRIAVGEALLGRVVDASLRPVDG-GAVPMLRQRTALHASPPPALSRRR 138

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           VE+    GIR +D    +  GQRI V AG G+GKS LL M ARS   D V++ L+GERGR
Sbjct: 139 VERAVPLGIRAVDACLTVGEGQRIAVMAGPGVGKSVLLGMLARSATADVVVVGLIGERGR 198

Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           EVREF+E  LG  L ++VVVVATSD SP+ R  A + A   AE+F  +G  VLL++DS++
Sbjct: 199 EVREFVERDLGPGLARAVVVVATSDASPLERLRAAMAATAAAEWFRGRGRRVLLLVDSLS 258

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           R A + REI   +GE P  RGYP S F+ LPRL+ER G      G+ITA  +VL +GD+H
Sbjct: 259 RVAQAQREIGLAAGEPPTTRGYPPSAFAILPRLVERAGNDAGP-GSITAFYTVLAEGDDH 317

Query: 321 -NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
             DPIAD+ R+ LDGH+VL+R LAE G +P +D LASVSR+ +    A+ + L      +
Sbjct: 318 AGDPIADAARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPAEHRALAREAREV 377

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +    E  D+  +G Y  G +  +D+A+  +  +  FL+Q P++ + 
Sbjct: 378 LSAHREAADLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAERTP 424


>gi|303319229|ref|XP_003069614.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|111606563|gb|ABH10645.1| ATP synthase beta chain [Coccidioides posadasii]
 gi|240109300|gb|EER27469.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320040970|gb|EFW22903.1| ATP synthase subunit beta [Coccidioides posadasii str. Silveira]
          Length = 521

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 191/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  L+  Y+     + G I  +      V   ++ +   L       G     L     
Sbjct: 34  ALRALSARYASTEAGKTGKIHQVIGAVVDVKFDTEQLPPILNALETENGGQRLVLEVAQH 93

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G      G   +I       GR++N  G PID    + KG 
Sbjct: 94  LGENVVRTIAMDGTEGLVRGAKAVDTGAPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGV 152

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 153 KMAPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 212

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 213 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 272

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 273 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGVM 332

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 333 QERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 390

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D     D   ++ + +  +I  ++  +DI  I G     +      V +   
Sbjct: 391 LDSKSRMLDPRIVGDEHYQVATRVQQMIQEYKSLQDIIAILGMDELSEAD-KLTVERARK 449

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I  KL
Sbjct: 450 LQRFLSQP---FAVAQVFTGIEGKL 471


>gi|56675682|emb|CAB63710.2| atp synthase beta subunit [Xerophyllum tenax]
          Length = 499

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVXDVVFPPGKMPXIYNALVVKG--RDTIGQKINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708201|emb|CAB90040.1| ATP synthase beta subunit [Cypripedium calceolus]
          Length = 484

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLG 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  ++    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +     R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|329118580|ref|ZP_08247284.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465315|gb|EGF11596.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 465

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 183/414 (44%), Gaps = 20/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIG 78
           +  G I  I      V      +  + D +  +   +D   +V ++  D +V    +G  
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRDAIPHVYDAL--KLVETDLTLEVQQLLGDGVVRTIAMGSS 58

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR+++ LGKP+D   ++     +  I  + P    
Sbjct: 59  DGLKRGMAVNNTGAPITVPVGKETLGRIMDVLGKPVDEAGAVD-SKHTRSIHQEAPKFDE 117

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + 
Sbjct: 118 LSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG 177

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D   
Sbjct: 178 VGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENG 237

Query: 254 ------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
                   +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+I
Sbjct: 238 KGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSI 295

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 296 TSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLG 355

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +   + +++E RDI  I G            V +   I  FL Q 
Sbjct: 356 QEHYDVARGVQSTLQKYKELRDIIAILGMDELS-AEDKLTVMRARKIQRFLSQP 408


>gi|116328613|ref|YP_798333.1| F0F1 ATP synthase subunit beta [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331342|ref|YP_801060.1| F0F1 ATP synthase subunit beta [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280912|sp|Q04S18|ATPB_LEPBJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122283600|sp|Q04ZU5|ATPB_LEPBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116121357|gb|ABJ79400.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector
           [Leptospira borgpetersenii serovar Hardjo-bovis L550]
 gi|116125031|gb|ABJ76302.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector
           [Leptospira borgpetersenii serovar Hardjo-bovis JB197]
          Length = 467

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/415 (25%), Positives = 187/415 (45%), Gaps = 27/415 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF----------VVHQGKNSDNLGQVIR-INLDIVYI 72
           G I  I      +   +     G+               GK    + +V   I    +  
Sbjct: 4   GKIKQIIGSVLDIEFEN-----GELPEIYNALEIEATVSGKREILIAEVQTHIGGKAIRA 58

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V + G+   +       GR+ N LGK ID   ++     +  I   
Sbjct: 59  IALSSTDGLIRGQEVTNTGKPISVPVGDATLGRIFNVLGKTIDEGPAI-TVKETRPIHRP 117

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P         + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +       
Sbjct: 118 APAFDELTSKTEVFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIQELINNIAKQHGG 177

Query: 191 --IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  +   +      + K+V+     +E P  R    L+A+T+AE+F  
Sbjct: 178 FSVFAGVGERTREGNDLWREMKESGVIDKTVLCYGQMNEPPGARLRVALSALTMAEHFRD 237

Query: 248 K-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G +VLL +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+
Sbjct: 238 SIGTDVLLFVDNIFRFSQAGSEVSALLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGS 295

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAW 365
           IT+V ++ V  D+  DP   +  + LD   VL+R+++++G YP VDPL S SR+ + +  
Sbjct: 296 ITSVQAIYVPADDLTDPAPANAFAHLDATTVLSRAISDKGIYPAVDPLDSTSRVMNAQVL 355

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +  ++ R+++ +DI  I G     +      V +   I  FL Q 
Sbjct: 356 GEEHYTVAREVQRILQRYKDLQDIIAILGMDELSEDD-KVLVARARKIEKFLSQP 409


>gi|62902841|gb|AAY19335.1| ATP synthase beta subunit [Ruptiliocarpon caracolito]
          Length = 485

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 10  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 70  ATDGLMRGMEVIDMGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 129 IPLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 189 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 RIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|284999823|dbj|BAI67812.1| ATP synthase beta-subunit [Asterococcus superbus]
          Length = 376

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    + K D ++ I   
Sbjct: 1   VAMNATEGLQRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNLGPV-KTDQTLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    L+A+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALSALT 179

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNGQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +    LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPSTTFVHLDATTVLSRNLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGDKHYNCAQAVKKTLQRYKELQDIIAILGLDELSEED-RLVVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|312285189|gb|ADQ64336.1| ATP synthase beta subunit [Anomospermum grandifolium]
          Length = 469

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 182/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+PID    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  ++ E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAVSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|119350535|gb|ABL63218.1| AtpB [Pleurastrum insigne]
          Length = 388

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 168/365 (46%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    + + + ++ I
Sbjct: 3   VRAVSMQPTEGLMRGMNVVDTGKPLNVPVGRNTLGRIFNVLGEPVDNLGPVKQSE-TLPI 61

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 62  HRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 121

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 122 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLPESKVALVYGQMNEPPGARMRVALT 181

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 182 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 241

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 242 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLES 299

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       S+   + R++E +DI  I G     +      V +   I  
Sbjct: 300 TSTMLQPWIVGEKHYSTAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 358

Query: 416 FLKQS 420
           FL Q 
Sbjct: 359 FLSQP 363


>gi|63091801|emb|CAH58751.1| ATP synthase alpha chain [Enterococcus villorum]
 gi|63091827|emb|CAH58764.1| ATP synthase alpha chain [Enterococcus villorum]
 gi|63091871|emb|CAH58786.1| ATP synthase alpha chain [Enterococcus villorum]
 gi|63091875|emb|CAH58788.1| ATP synthase alpha chain [Enterococcus villorum]
          Length = 367

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGESLIGRVVNPLGQPIDGLGEIV-TDKARPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTILNQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|224830582|gb|ACN66386.1| ATP synthase beta chain [Stephania rotunda]
          Length = 445

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 2   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 59

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 60  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 118

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 119 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 178

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 179 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 239 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 297 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 356

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|115604941|ref|YP_784393.1| ATP synthase CF1 beta subunit [Drimys granadensis]
 gi|122164434|sp|Q06GZ0|ATPB_DRIGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|112032669|gb|ABH88304.1| ATP synthase CF1 beta subunit [Drimys granadensis]
          Length = 498

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVHGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGSDELSEED-RLTVARARKIERFLSQP 434


>gi|13236742|gb|AAK14676.1| ATP synthase beta subunit [Arenga pinnata]
          Length = 498

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MCATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|312285235|gb|ADQ64359.1| ATP synthase beta subunit [Kolobopetalum leonense]
          Length = 466

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D  GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|294012671|ref|YP_003546131.1| F-type H+-transporting ATPase beta chain [Sphingobium japonicum
           UT26S]
 gi|292676001|dbj|BAI97519.1| F-type H+-transporting ATPase beta chain [Sphingobium japonicum
           UT26S]
          Length = 481

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 27/434 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      VT       +   +         + +V   +  + V    +   + ++
Sbjct: 8   GRISQVIGAVVDVTFPDALPAILSALETSNNGQRLVLEVAQHLGENTVRTIAMDSTDGLT 67

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G +  +       GR++N +G+PID    + +  LS  I +K P  +++   
Sbjct: 68  RGQEVTDTGAQISVPVGPATLGRILNVVGEPIDERGPV-ETTLSAPIHAKAPEFVDQSTD 126

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 127 ASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGER 186

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   ++L   +              K  +V    +E P  R    L+ +TIAEYF
Sbjct: 187 TREGNDLYHEFLDAGVIAKDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYF 246

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 247 RDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTNK 304

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SR+ +  
Sbjct: 305 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPR 364

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +  +   ++  ++ +++  +DI  I G     +      V +   I  FL Q    
Sbjct: 365 VVGQEHYETARAVQAILQKYKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP--- 420

Query: 424 LSSEDVFQEITKKL 437
               +VF  I+ K 
Sbjct: 421 FHVAEVFTGISGKF 434


>gi|170017975|ref|YP_001728894.1| ATP synthase F1, beta subunit [Leuconostoc citreum KM20]
 gi|226740651|sp|B1MW85|ATPB_LEUCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|169804832|gb|ACA83450.1| ATP synthase F1, beta subunit [Leuconostoc citreum KM20]
          Length = 466

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/424 (26%), Positives = 190/424 (44%), Gaps = 17/424 (4%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGD-FVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +  G +  +      V   S  Q   + +   + +G       +V + +   IV    + 
Sbjct: 1   MSTGKVVQVIGPVVDVAFESGQQVPDINNALKIDKGDGQTLTVEVSLALGDGIVRTIAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G   ++       GRV N LG+P+D +  +        I    P  
Sbjct: 61  STDGLQRGMSVTDTGDAIKVPVGEATLGRVFNVLGEPVDNNGEIAAETPRHSIHRDAPSY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
            +     +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+ 
Sbjct: 121 DDLANSTEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + K + +V    +E P  R    LT +T+AE F      
Sbjct: 181 TGVGERTREGNDMYHEMAESGVLKQTAMVYGQMNEPPGARMRVALTGLTMAENFRDSEGK 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D++ DP   +  + LD    L R+L ++G YP VDPLAS S   D      + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERALTQQGIYPAVDPLASTSSALDPQVVGQEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++ + +   + R+ E +DI  I G     D      V++   I  FL Q     S  + 
Sbjct: 359 YEVATEVQRTLQRYRELQDIISILGMDELSDEE-KTTVNRARRIQFFLSQP---FSVAET 414

Query: 430 FQEI 433
           F  I
Sbjct: 415 FTGI 418


>gi|89095631|ref|ZP_01168525.1| F0F1 ATP synthase subunit beta [Bacillus sp. NRRL B-14911]
 gi|89089377|gb|EAR68484.1| F0F1 ATP synthase subunit beta [Bacillus sp. NRRL B-14911]
          Length = 473

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 170/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + ++ G  V   G    +       GRV N LG+ ID D +L 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLTRGAEVIDTGAPISVPVGDITLGRVFNVLGETIDLDPALQ 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G     I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 AGIRRDSIHREAPKFEQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ RL E
Sbjct: 231 TGLTMAEFFRDDQGQDVLFFMDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGRLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   +   +   + R+ E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALSPEIVGEEHYSVARQVQSTLQRYRELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            +L Q+
Sbjct: 408 FYLSQN 413


>gi|116204743|ref|XP_001228182.1| ATP synthase beta chain, mitochondrial precursor [Chaetomium
           globosum CBS 148.51]
 gi|88176383|gb|EAQ83851.1| ATP synthase beta chain, mitochondrial precursor [Chaetomium
           globosum CBS 148.51]
          Length = 519

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/385 (28%), Positives = 176/385 (45%), Gaps = 19/385 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G      G    I       GR++N  G PID    + K D
Sbjct: 92  LGENVVRCIAMDGTEGLVRGAKAADTGAPITIPVGPATLGRIMNVTGDPIDERGPI-KTD 150

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I ++ P  +++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 151 KFLPIHAEAPEFVDQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 210

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 211 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGARARV 270

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 271 ALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGM 330

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 331 QERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 388

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +   + S +  ++  ++  +DI  I G     +      V +   
Sbjct: 389 LDSKSRMLDPRIVGQEHYDIASRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARK 447

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           I  FL Q     +   VF  I  KL
Sbjct: 448 IQRFLSQP---FTVAQVFTGIEGKL 469


>gi|124361764|gb|ABN09324.1| ATP synthase beta subunit [Diospyros sp. K20613]
          Length = 465

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQSINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G      G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEAIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|89242542|gb|ABD64629.1| ATPase beta subunit [Xanthosoma mafaffa]
          Length = 436

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I++  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTAGQQIKVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AE+F      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|119350445|gb|ABL63173.1| AtpB [Ankyra judayi]
          Length = 392

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 164/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   D S+ I
Sbjct: 5   VRAVSMNPTEGLMRGMEVLDTGKALTVPVGKATLGRIFNVLGEPVDNMGPVN-NDESLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    L 
Sbjct: 124 HGGVSVFAGVGERTREGNDLYAEMRESGVIVEKNLADSKVALVYGQMNEPPGARMRVALP 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       S+   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYSCAQSIKKTLQRYKELQDIIAILGLDELSEED-RLVVSRARKIER 360

Query: 416 FLKQS 420
            L Q 
Sbjct: 361 LLSQP 365


>gi|13236768|gb|AAK14689.1| ATP synthase beta subunit [Cyrtostachys renda]
          Length = 498

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+ +A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALPMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNDQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|7708560|emb|CAB89960.1| ATP synthase beta subunit [Prostanthera ovalifolia]
          Length = 492

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V      +       VV      D +GQ I +  ++        V   
Sbjct: 20  GRIIQIIGPVLDVAFPPGKMPNIYNALVVXX---RDTVGQPINVTCEVQQLLGNNRVRAV 76

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 77  AMSATDGLTRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLVPVD-ARTTFPIHRSA 135

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 136 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 195

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 196 SVFGGVGERTREGNDLYMEMKESGVINEGNIAESKVALVYGQMNEPPGARMRVGLTALTM 255

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 256 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 313

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 314 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 373

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 374 LQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 432

Query: 420 S 420
            
Sbjct: 433 P 433


>gi|7708634|emb|CAB89997.1| ATP synthase beta subunit [Sambucus nigra]
          Length = 467

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V  G   D  GQ I +  ++        V    
Sbjct: 1   GRIIQIIGPVLDVAFPPGKMPNIYNALVVXG--RDTAGQPINVTCEVQQLLGNHRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYDTAQMVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|20269446|gb|AAM17950.1| ATP synthase beta subunit [Vaccinium uliginosum]
          Length = 432

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           +  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 6   QGRDTVGQPINVTCEVQQLVGNNRVRAVAMSATDGLTRGMGVIDTGAPLSVPVGEATLGR 65

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +  +     F+TGI+V+D+  P   G +I
Sbjct: 66  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIELETKLSIFETGIKVVDLLAPYRRGGKI 124

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  +              
Sbjct: 125 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKXMKETGVINEQNIA 184

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 185 ESKVALVYGQMNEPPGARMRVXXTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 244

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + L
Sbjct: 245 LGRIPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 302

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       D   K+   +   + R++E +DI  
Sbjct: 303 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQKVKQTLQRYKELQDIIA 362

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 363 ILGLDELSEED-RLTVSRARKIERFLSQP 390


>gi|1071643|gb|AAA82637.1| ATPase [Escherichia coli]
          Length = 457

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 159/441 (36%), Positives = 237/441 (53%), Gaps = 19/441 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINL 67
           A+      V + G ++  T +    T L   + LG   V + +N     +   +V+  N 
Sbjct: 17  AKMAQLPAVRRYGRLTRATGLVLEATGL--QLPLGATCVIERQNGSETHEVESEVVGFNG 74

Query: 68  DIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWCGRVINALGKPIDGDDS 118
             +++ P+   E +  G  V+           G+ ++       GRV++  GKP+DG  S
Sbjct: 75  QRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGK-QLPSVPALLGRVLDGSGKPLDGLPS 133

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
               + +  +++     + R  +E    TG+R I+    +  GQR+G+FAGS +GKS LL
Sbjct: 134 PDTTE-TGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSAVGKSVLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR    D +++ L+GERGREV++FIE+ LG +   +SVV+ A  D SP+LR   P  
Sbjct: 193 GMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPRDVSPLLRMRMPAY 252

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A  IAE F  +G +VLLI+DS+TR+  + REIA   GE P  +GYP SVF++LP L+ER 
Sbjct: 253 ATRIAEDFRDRGQHVLLIMDSLTRYGMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 312

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
           G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+
Sbjct: 313 GNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 372

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR      S      V +   L+  F   RD+  +G Y  G D +LDKA+   P +  +L
Sbjct: 373 SRAMTALISEQHYARVRTFKQLLSSFHGNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYL 432

Query: 418 KQSPSDLSS-EDVFQEITKKL 437
           +Q   + +  E   Q + +  
Sbjct: 433 QQGIFERADWEASLQGLERIF 453


>gi|253580460|ref|ZP_04857725.1| F0F1 ATP synthase, alpha subunit [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848190|gb|EES76155.1| F0F1 ATP synthase, alpha subunit [Ruminococcus sp. 5_1_39BFAA]
          Length = 502

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/429 (23%), Positives = 175/429 (40%), Gaps = 15/429 (3%)

Query: 5   LETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +  L +  ++Y +     + G + S+     TV  +  +   G+ V  +       G V 
Sbjct: 10  ISILKEEIKNYDEISKDQEVGTVISVGDGIATVHGI-DHAMYGEVVTFENG---LKGMVQ 65

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + +     G    I  G  V     +  +     + GR++NALG PIDG   + K 
Sbjct: 66  DIRANSIGCILFGKDTGIKEGTKVARTQKQAGVPVGDAFIGRIVNALGAPIDGKGEI-KA 124

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           D    + +  P  ++R+ V    +TGI  ID   P+  GQR  +      GK+++     
Sbjct: 125 DGYRPVENPAPGIIDRKSVTVPLETGILSIDSMFPIGRGQRELIIGDRQTGKTSVALDTI 184

Query: 183 RSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
            +        I   +G++   V + +           + V  +T+ +   L+ + P    
Sbjct: 185 LNQKGKDVICIYVAIGQKASTVAKIVSTLEKHGAMDYTTVFSSTASDCAPLQYIVPYAGT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AEYF  KG +VL++ D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 245 ALAEYFMYKGKDVLMVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERSSR 304

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             ++   G+ITA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 305 LNEKVGGGSITALPIIETQAGDLSAYIPTNVISITDGQIFLESDLFNSGMRPAVNVGLSV 364

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   KK   S+   + ++ E     +   +   +D    + +     + + L
Sbjct: 365 SRVGGAAQAKAMKKAAGSVRIDLAQYREME---IFTQFSSDLDEATTQQLKYGSGLMELL 421

Query: 418 KQSPSDLSS 426
           KQ  S   S
Sbjct: 422 KQPLSSPLS 430


>gi|152980404|ref|YP_001355317.1| F0F1 ATP synthase subunit beta [Janthinobacterium sp. Marseille]
 gi|166201713|sp|A6T470|ATPB_JANMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|151280481|gb|ABR88891.1| F-type H+-transporting ATPase beta chain [Janthinobacterium sp.
           Marseille]
          Length = 466

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 168/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + +  G ++ + G    +       GR+++ LG PID    +   +
Sbjct: 45  LGDGIVRTIALGTSDGLRRGMIIQNTGNPITVPVGTATLGRIMDVLGNPIDECGPVS-HE 103

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I  K P        +   +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 104 RTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDY--------LGDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 164 NIAKAHSGLSVFAGVGERTREGNDFYHEMADAKVVDLENPANSKVAMVYGQMNEPPGNRL 223

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ R
Sbjct: 224 RVALTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGR 283

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VD
Sbjct: 284 LQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVD 341

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      D      ++   + R++E RDI  I G    +       V +  
Sbjct: 342 PLDSTSRQLDPLVVGQDHYDTARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLLVARAR 400

Query: 412 IIYDFLKQS 420
            +  FL Q 
Sbjct: 401 KMQRFLSQP 409


>gi|14718171|gb|AAK72824.1| ATP synthase beta subunit [Petrosavia stellaris]
          Length = 483

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 178/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D  GQ I +  ++        V   
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPYIYNTLVV---KGRDTTGQQINVTCEVQQLLGNNRVRAV 70

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 71  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSA 129

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 130 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 189

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 190 SVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTM 249

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 250 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--T 307

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 308 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 367

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 368 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 426

Query: 420 S 420
            
Sbjct: 427 P 427


>gi|5001581|gb|AAD37037.1|AF092111_1 ATP synthase beta subunit [Pachysandra procumbens]
          Length = 495

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTXXXS-PIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMXESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|66276275|gb|AAY44152.1| ATP synthase beta subunit [Ecballium elaterium]
          Length = 478

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/421 (25%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I      V     +   + + ++ + +++D  GQ I +  ++        V   
Sbjct: 1   SGRIAQIIGPVLDVAFPPGKMPNIYNALIVKSQDTD--GQEINVTCEVQQLLGNNRVRAV 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V        +       GR+ N LG+PID    +     +  I    
Sbjct: 59  AMSATDGLMRGLEVIDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 118 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 177

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 178 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 237

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 238 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 295

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 296 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 355

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 356 LQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 414

Query: 420 S 420
            
Sbjct: 415 P 415


>gi|317011330|gb|ADU85077.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SouthAfrica7]
          Length = 466

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 3   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + +    L+  I  K P    
Sbjct: 63  EGLVRNQVVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPIKPS-LTWPIHRKAPSFEQ 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  K   +V
Sbjct: 182 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDKKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 407


>gi|229136124|ref|ZP_04264877.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST196]
 gi|228647283|gb|EEL03365.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST196]
          Length = 469

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG  ID D  + 
Sbjct: 49  ALHLGDDTVRTVAMSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGDVP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADVRRDPIHRQAPAFEELSTRIEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 289 RI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 347 STSRALSPEIVGEEHYEVARQVQQTLQRYKELQDIIAILGMDELSEED-KLVVHRARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|5758858|gb|AAD50832.1| ATP synthase beta subunit [Calathea loeseneri]
          Length = 496

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIRLDTKLSIFETGIKVVDLLPPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E I  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQEGI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|157285069|gb|ABV31274.1| ATPase [Vibrio parahaemolyticus]
 gi|157285115|gb|ABV31297.1| ATPase [Vibrio parahaemolyticus]
          Length = 441

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|6706286|emb|CAB65915.1| ATP synthase beta subunit [Phlox longifolia]
          Length = 491

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVHXLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRXMEVXDTGAAISVPVGEATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNAQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEXHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|307931014|dbj|BAJ21368.1| ATP synthase CF1 alpha subunit [Pseudoscourfieldia marina]
          Length = 355

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 95/355 (26%), Positives = 155/355 (43%), Gaps = 10/355 (2%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSA 99
           + V  G+ V  +    ++ G  + +  D V    +G G  I  G  V   G+  +I    
Sbjct: 4   ENVMAGELVEFE---DNSRGIALNLEQDNVGAVLMGDGRAIQEGSSVRATGKIAQIPVGE 60

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
            + GRV+NAL +PIDG   +   D  + I S  P  + R+ V +  +TG+  ID   P+ 
Sbjct: 61  KFLGRVVNALAEPIDGKGEIAADDSRL-IESPAPGIVARRSVYEPLQTGLIAIDAMIPIG 119

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-K 216
            GQR  +      GK+ + S    +   +    +   +G++   V +             
Sbjct: 120 RGQRELIIGDRQTGKTAVASDTILNQKGNGVICVYVAIGQKASSVAQLRTTLEERGAMDY 179

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           S++V  T+D    L+ +AP T   +AEYF   G + L+I D +++ A + RE+A      
Sbjct: 180 SIIVSQTADTPATLQYLAPYTGAALAEYFMYTGRHTLIIYDDLSKQASAYREMALLLRRP 239

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V SI DG
Sbjct: 240 PGREAYPGDVFYLHSRLLERAAKLNDELGGGSMTALPVVETQEGDVSAYIPTNVISITDG 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389
            + L+  +   G  P ++   SVSR+   A     K++   L   + +F E    
Sbjct: 300 QVFLSGDIFNAGIRPAINVGISVSRVGSAAQVKAMKQVAGKLKLELAQFAELEAF 354


>gi|257853478|gb|ACV71741.1| ATP synthase beta subunit [Hemerocallis minor]
          Length = 479

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V Q  + D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVVFPPGKMPNIYNALVVQ--SRDTAGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|257056930|ref|YP_003134762.1| F0F1 ATP synthase subunit alpha [Saccharomonospora viridis DSM
           43017]
 gi|256586802|gb|ACU97935.1| ATP synthase F1 subcomplex alpha subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 548

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 99/435 (22%), Positives = 175/435 (40%), Gaps = 27/435 (6%)

Query: 6   ETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +A   E+Y  +        + G +         V  L       + +   G     LG
Sbjct: 9   DEIANAIENYVSSYSPDVSREEVGVVVDTGDGVAHVEGL-PGTMANELLEFPGG---VLG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
               +    + +  +G  E I  G  V   G+   I     + GRVI+ LGKP+DG   +
Sbjct: 65  VAQNLEPRQIGVVILGDFESIEEGQEVKRTGQILSIPVGDNFLGRVIDPLGKPLDGLGDI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
              +    +  +    + RQ V +  +TGI  ID  TP+  GQR  +      GK     
Sbjct: 125 EATE-RRALELQAASVVERQPVSEPLQTGITAIDAMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
            T+++  A  +  D     + I   +G++G  +    +          + +V A + +S 
Sbjct: 184 DTIINQKANWETGDPKKQVRCIYVAIGQKGSTIASVRKSLEDAGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP +   + +++  +G +VL++ D +T+ A + R I+      P    +P  VF 
Sbjct: 244 GFKWLAPYSGSALGQHWMYQGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAFPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +    ++ +  I  +V SI DG       L   G
Sbjct: 304 LHSRLLERCAKLSDELGGGSLTGLPVIETKANDISAYIPTNVISITDGQCFFQSDLFNSG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           + P VD   SVSR+   A     KK+  SL   + ++EE +       +   +D      
Sbjct: 364 QRPAVDVTTSVSRVGGDAQIKAMKKVSGSLRIDLSQYEELK---AFAAFASDLDAASKAQ 420

Query: 407 VHQVPIIYDFLKQSP 421
           + +   +Y+ LKQ  
Sbjct: 421 LDRGARLYELLKQPQ 435


>gi|158602299|gb|ABW74616.1| ATP synthase beta subunit [Trollius ledebouri]
          Length = 471

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 23  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVLDTGAPLSVPVGGATLGR 82

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+     +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 83  IFNVLGEPVXNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 141

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 142 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 201

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 202 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 261

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 262 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 319

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 320 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 379

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 380 ILGLDELSEED-RLTVARARKIERFLSQP 407


>gi|123325677|gb|ABM74463.1| ATP synthase beta subunit [Glycosmis trichanthera]
          Length = 462

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDP-RTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|42559016|gb|AAS20194.1| ATP synthase beta subunit [Helmholtzia glaberrima]
          Length = 489

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|63091873|emb|CAH58787.1| ATP synthase alpha chain [Enterococcus ratti]
 gi|63091879|emb|CAH58790.1| ATP synthase alpha chain [Enterococcus ratti]
          Length = 367

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEELIGRVVNPLGQPIDGLGEIV-TDKARPVEAMAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTILNQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|309784443|ref|ZP_07679082.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617]
 gi|308927950|gb|EFP73418.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617]
          Length = 435

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALAVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|21684873|emb|CAD11563.1| ATP synthase beta subunit [Centrolepis strigosa]
          Length = 489

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKLPNIFNALVIKG--RDIVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +    +S  I    P
Sbjct: 73  MSATEGLMRGMEVVDTGAPLSVPVGKATLGRIFNVLGEPVDNLGPVDTSAMS-PIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYIEMKESGVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +K +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKKASITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPQIVGNEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 428


>gi|4063570|gb|AAC98343.1| ATP synthase beta subunit [Tropaeolum tricolor]
          Length = 456

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDMGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|37729414|gb|AAN71673.1| ATP synthase beta subunit [Ticodendron incognitum]
          Length = 472

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTASQQINVTCEVQQLLGNNRVRAVAMS 69

Query: 77  IGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 70  ATDGLTRGMEVIDTGAXXSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 129 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K   V    +E P  R    LTA+T+AEY
Sbjct: 189 GGVGERTREGNDLYMEMKESGVINEQNIAESKVAXVYGQMNEPPGARMRVGLTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 AGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 367 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 423


>gi|289498347|gb|ADC99212.1| ATP synthase F1 alpha subunit [Vibrio crassostreae]
          Length = 440

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/419 (23%), Positives = 176/419 (42%), Gaps = 27/419 (6%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
             ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   GR
Sbjct: 1   ILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGR 56

Query: 93  F-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
              +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + 
Sbjct: 57  ILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKS 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDY 209
           +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +   
Sbjct: 116 VDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKL 175

Query: 210 LGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
                   +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+
Sbjct: 176 EEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQ 235

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLV 315
           I+      P    +P  VF    RLLER     +               G++TA+  +  
Sbjct: 236 ISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEHYVEEFTKGEVKGKTGSLTALPIIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   
Sbjct: 296 QAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGG 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 IRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 409


>gi|254520283|ref|ZP_05132339.1| ATP synthase F1 sector subunit beta [Clostridium sp. 7_2_43FAA]
 gi|226914032|gb|EEH99233.1| ATP synthase F1 sector subunit beta [Clostridium sp. 7_2_43FAA]
          Length = 463

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 115/407 (28%), Positives = 190/407 (46%), Gaps = 12/407 (2%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           + G +  +      +   S  +     +  +  G+    +     +  DIV    +   +
Sbjct: 4   RVGKVVQVIGPVVDIKFDSDALPNIYNEIRIDMGEKLLIVEVEQHMGDDIVRTIAMESTD 63

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G      GR   +       GRV N LG PID    +   ++   I    P    +
Sbjct: 64  GLKRGMKATDMGRCISVPVGREVLGRVFNVLGHPIDNAGDVEIKEM-YPIHRPAPSFKEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + V
Sbjct: 123 SLEPQMFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGV 182

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +   +      + K+ +V    +ESP  R    LT +T+AEYF  +G +VLL
Sbjct: 183 GERSREGNDLYYEMKESGVIDKTALVFGQMNESPGARMRVSLTGLTMAEYFRDQGQDVLL 242

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V 
Sbjct: 243 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVY 300

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +   + 
Sbjct: 301 VPADDLTDPAPATTFTHLDATTVLSRSIAELGIYPAVDPLESNSRILDPRVVGREHYDVA 360

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +++ R++E +DI  I G     D    K V +   +  FL Q 
Sbjct: 361 TEVKNILERYKELQDIIAILGVDELSDED-KKVVARARRVQRFLSQP 406


>gi|186886333|gb|ACC93569.1| ATPase F1 alpha subunit [Marsippospermum grandiflorum]
          Length = 351

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 87/339 (25%), Positives = 149/339 (43%), Gaps = 15/339 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 4   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGAPIDGKGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +   TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LGDHE-RRRVEVKAPGIIERKSVHEPMPTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 123 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 182

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 183 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 242

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 243 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 302

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384
           G  P ++   SVSR+   A     K++  SL   + ++ 
Sbjct: 303 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYR 341


>gi|157285043|gb|ABV31261.1| ATPase [Vibrio furnissii]
 gi|157285045|gb|ABV31262.1| ATPase [Vibrio furnissii]
 gi|157285047|gb|ABV31263.1| ATPase [Vibrio furnissii]
 gi|157285111|gb|ABV31295.1| ATPase [Vibrio furnissii]
          Length = 441

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G+ V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGEKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDAMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  K ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALKNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVSADYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDDATKRQLEHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|42559052|gb|AAS20212.1| ATP synthase beta subunit [Philesia magellanica]
          Length = 488

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDAVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|14718022|gb|AAK72752.1| ATP synthase beta subunit [Cucumis sativus]
          Length = 483

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DISGQEINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+PID    +     +  I    P
Sbjct: 72  MSATDGLTRGMEVVDTRAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEENFAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I   L Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEKD-RLTVARARKIERVLSQP 427


>gi|13236810|gb|AAK14710.1| ATP synthase beta subunit [Phytelephas aequatorialis]
          Length = 498

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +         +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSISETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +  G            K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKGSGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|55056878|emb|CAF22239.1| ATP synthase beta subunit [Serenoa repens]
          Length = 466

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|33318671|gb|AAQ05219.1| ATP synthase beta subunit [Stangeria eriopus]
          Length = 424

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 165/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDISRSKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|289498353|gb|ADC99215.1| ATP synthase F1 alpha subunit [Vibrio sp. F6]
          Length = 434

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 176/418 (42%), Gaps = 27/418 (6%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             +  L+  V  G+ +   G +       + +  D V    +G   ++  G  V   GR 
Sbjct: 1   IRIHGLAD-VMQGEMIELPGGH---YALALNLERDSVGAVVMGPYVDLQEGMKVTGTGRI 56

Query: 94  -RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
             +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +
Sbjct: 57  LEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYL 210
           D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +    
Sbjct: 116 DSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLE 175

Query: 211 GDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269
                  +VVVVA++ ES  L+ +AP +   + EYF  +G++ L+I D +++ A + R+I
Sbjct: 176 EHGALANTVVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQI 235

Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVD 316
           +      P    +P  VF    RLLER     +               G++TA+  +   
Sbjct: 236 SLLLKRPPGREAFPGDVFYLHSRLLERAARVSEVYVEKFTNGEVKGKTGSLTALPIIETQ 295

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
             + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +
Sbjct: 296 AGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGI 355

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
              + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 RTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 408


>gi|225012512|ref|ZP_03702948.1| ATP synthase F1, alpha subunit [Flavobacteria bacterium MS024-2A]
 gi|225003489|gb|EEG41463.1| ATP synthase F1, alpha subunit [Flavobacteria bacterium MS024-2A]
          Length = 525

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/445 (23%), Positives = 173/445 (38%), Gaps = 36/445 (8%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
            QL+   S + + + G +  +      V  LS     G+ V     +++  G V+ +  D
Sbjct: 15  KQLSGYSSASALDEVGTVLEVGDGIARVFGLS-NAQYGELVAF---DNNLEGMVLNLEED 70

Query: 69  IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V +  +G  +++  GD V    R   I+      GRV+N LG PIDG  +L      M 
Sbjct: 71  HVGVVLLGPSKDVKEGDTVKRTQRIASINVGEGVVGRVVNTLGNPIDGKGALEGELFEMP 130

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +  K P  + RQ V +  +TGI+ ID   P+  GQR  V      GK+T+      +   
Sbjct: 131 LERKAPGVIFRQPVNEPLQTGIKSIDAMIPVGRGQRELVIGDRQTGKTTVCIDTILNQKE 190

Query: 188 -------DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAV 239
                     +   +G++   V    +          + +V A + +   ++  AP    
Sbjct: 191 FYDAGEPVYCVYVAIGQKASTVAGIAKTLEDKGAMAYTTIVAANASDPAPMQVYAPFAGA 250

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            I EYF   G   L+I D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 251 AIGEYFRDTGRPALIIYDDLSKQAVAYREVSLLLRRPPGREAYPGDVFYLHSRLLERAAK 310

Query: 300 SE--------------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
                                 K  G++TA+  +     + +  I  +V SI DG I L 
Sbjct: 311 VIADDNIAKEMNDLPASLKSKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLE 370

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A     KK+  +L     +F E         +   +
Sbjct: 371 SDLFNSGVRPAINVGISVSRVGGSAQIKSMKKVSGTLKLDQAQFRELE---AFAKFGSDL 427

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDL 424
           D      + +     + LKQ+ +D 
Sbjct: 428 DAATLNVIEKGRRNVEILKQAQNDP 452


>gi|238917402|ref|YP_002930919.1| F-type H+-transporting ATPase beta chain [Eubacterium eligens ATCC
           27750]
 gi|238872762|gb|ACR72472.1| F-type H+-transporting ATPase beta chain [Eubacterium eligens ATCC
           27750]
          Length = 470

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V    + +  + D +     +   + +V   I  D V    +   E +
Sbjct: 12  GKIIQVMGPVVDVAFEDENLPAIRDALEVNNGDKKCVMEVAQHIGNDTVRCIMLASSEGL 71

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   +        GR+ N LG+ IDG +     +   EI  + P    +  
Sbjct: 72  CRDMEVTATGSGIKTPVGEKTLGRLFNVLGEAIDGKEQ-PDAEEKWEIHREPPTFEEQNP 130

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
            E+  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 131 AEEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGE 190

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL 
Sbjct: 191 RSREGNDLWTEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLLF 250

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 251 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 308

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 309 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLDSTSRILEPDIVGEEHYEVAR 368

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 369 KVQEILQKYKELQDIIAILGMEELADED-KVTVFRARKIQKFLSQP 413


>gi|157285053|gb|ABV31266.1| ATPase [Vibrio mimicus]
 gi|157285283|gb|ABV31381.1| ATPase [Vibrio mimicus]
 gi|157285285|gb|ABV31382.1| ATPase [Vibrio mimicus]
 gi|157285287|gb|ABV31383.1| ATPase [Vibrio mimicus]
          Length = 441

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 177/420 (42%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  +  G+ +   G   +     + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-IMQGEMIELPG---NRYALALNLERDSVGAVVMGPYADLREGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +G   L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPIG-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  K ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALKNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|149390449|ref|YP_001294277.1| ATP synthase CF1 beta subunit [Illicium oligandrum]
 gi|190358671|sp|A6MMV1|ATPB_ILLOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|147917402|gb|ABQ52526.1| ATP synthase CF1 beta subunit [Illicium oligandrum]
          Length = 498

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        +   
Sbjct: 21  GRITQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRIRAV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVSGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTM 374

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  +   +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEKHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|119350455|gb|ABL63178.1| AtpB [Bracteacoccus giganteus]
          Length = 383

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I  +
Sbjct: 1   VAMTPTDGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEPVDNMGPVNNQE-TLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLGDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDANKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGVLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQNVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|6017800|gb|AAF01634.1| ATP synthase beta subunit [Hamamelis virginiana]
          Length = 490

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D             I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGP-XXXXXXXXIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110915710|gb|ABH02643.1| ATP synthase beta subunit [Vulpia microstachys]
          Length = 490

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATXGRIFNVLGEPVDNLGPVDSS-ATFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELQDIIAILGXDELSEED-RLTVARARKIERFLSQP 426


>gi|157285203|gb|ABV31341.1| ATPase [Vibrio pomeroyi]
          Length = 441

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEVYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|17224757|gb|AAL37100.1| ATP synthase beta subunit [Tacca artocarpifolia]
          Length = 483

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|23503629|dbj|BAC20411.1| ATP synthase beta-subunit [Haematococcus lacustris]
          Length = 376

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    +  G+ ++ I  +
Sbjct: 1   VSMQQTDGLMRGMEVIDTGKPLSVPVGRDTLGRIFNVLGEPVDNLGPVNTGE-TLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLPESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYSTAQNVKKTLQRYKELQDIIAILGLDELSEED-RLVVTRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|195183496|dbj|BAG66962.1| ATP synthase beta subunit [Gloeospermum sphaerocarpum]
          Length = 489

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTIGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPINRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G   +E      +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTQEGNDLYIEMKESGVINEENIVESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|7708193|emb|CAB90042.1| ATP synthase beta subunit [Ceratophyllum demersum]
          Length = 463

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 15  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 74

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 75  IFNVLGEPVDNLGPVD-TRTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 133

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   +R RE  +   +             
Sbjct: 134 GLFRGAGVGKTVLIMELINNIAKAHGGVSVFGGVGQRTREGNDLYMEMKESGVINEQNLA 193

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 194 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 253

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 254 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 311

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 312 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 371

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 372 ILGLDELSEED-RLTVARARKIERFLSQP 399


>gi|55056884|emb|CAF21943.1| ATP synthase beta subunit [Persea americana]
          Length = 466

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 424


>gi|21684885|emb|CAD11569.1| ATP synthase beta subunit [Lachnocaulon anceps]
          Length = 491

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I  I      V   S  +       VV   K  D +G  I +  ++        V   
Sbjct: 15  GSIIQIIGPVLDVNFPSGKLPNIYNALVV---KGRDTVGHQINVTCEVQQLLGNNRVRAV 71

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG PID    +     +  I    
Sbjct: 72  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGXPIDNLGPVDTS-ATSPIHRSA 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 131 PAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 190

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 191 SVFGGVGERTREGNDLYMEMKESGVINENNLAESKVALVYGQMNEPPGARMRVGLTALTM 250

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 251 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 309 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 368

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  D   ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 369 LQPRIVGDEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQ 427

Query: 420 S 420
            
Sbjct: 428 P 428


>gi|307931018|dbj|BAJ21370.1| ATP synthase CF1 alpha subunit [Tetraselmis chuii]
          Length = 365

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 14/373 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            +  L + V  G+ +  +      +G  + +    V    +G G  +  G  V   G+  
Sbjct: 1   RIYGLEK-VMAGELLEFEDG---TVGIALNLEAKNVGAVLMGEGLTVQEGSSVKATGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++     + GR++++L +PIDG   +   D  + I +  P  ++R+ V +  +TG+  ID
Sbjct: 57  QVPVGEAFLGRIVDSLARPIDGKGDIKADDTRL-IEASAPGIISRRSVYEPMQTGLIAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+ +      +   +    +   +G++   + + +     
Sbjct: 116 AMIPIGRGQRELIIGDRQTGKTAIAVDTILNQKGNGVICVYVAIGQKASSIAQVVNTLDE 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 S++V AT+D    L+ +AP T   +AEYF   G + L+I D +T+ A + RE++
Sbjct: 176 RGALDYSIIVAATADTPATLQYLAPYTGAALAEYFMYTGRHTLVIYDDLTKQAQAYREMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +  +G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDMGEGSMTALPIVETQEGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  +   G  P ++   SVSR+   A     K++   L   + +F E   
Sbjct: 296 ISITDGQIFLSADIFNSGIRPAINVGISVSRVGSAAQVKAMKQVAGKLKLELAQFAELE- 354

Query: 389 IRLIGGYRPGVDL 401
                 +   +D 
Sbjct: 355 --AFSQFASDLDK 365


>gi|312285191|gb|ADQ64337.1| ATP synthase beta subunit [Anomospermum solimoesanum]
          Length = 468

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+PID    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|298530640|ref|ZP_07018042.1| ATPase, FliI/YscN family [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510014|gb|EFI33918.1| ATPase, FliI/YscN family [Desulfonatronospira thiodismutans ASO3-1]
          Length = 471

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 159/431 (36%), Positives = 236/431 (54%), Gaps = 12/431 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVV----HQGKNSDNLGQVIRINLDIV 70
              N V+  G ++ +  +   V        LG           ++S    +V+      V
Sbjct: 13  RDMNPVMTYGKVTKVVGLV--VEGRGLKAPLGAICQLLPDEAHEDSAINAEVVGFRDGAV 70

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
              P G    I  G L+ +          + + G+ ++A G P++ D S+        + 
Sbjct: 71  LFMPYGDMRGIKPGSLIRNSSMPPLFPVGSKYLGKAVDAFGTPLEDDGSIIPQKY-YPLY 129

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           +     M R R+++    GI+ I+    L  GQR+G+ AGSG+GKST + M AR    D 
Sbjct: 130 AAPLNPMQRPRIDEPLDVGIKSINSLLTLGKGQRVGIMAGSGVGKSTAMGMMARYTEADV 189

Query: 190 VIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            +I+LVGERGREV EFI+ D   + + +SV+VVATSD+ P++R  A   A  +AEYF  +
Sbjct: 190 NVIALVGERGREVLEFIDKDLGPEGMARSVLVVATSDQGPLIRMRAAYAATAMAEYFRDQ 249

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VLL++DS+TRFA + RE+   +GE P  RGY  +VFS LP+LLER G S K  G+IT
Sbjct: 250 GKDVLLMMDSVTRFAMAAREVGLAAGEPPTTRGYTPTVFSHLPKLLERTGKSGK--GSIT 307

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
            + +VLV+GD+ N+P+AD+VRSILDGHIVL R LA++G +P +D L SVSRL       D
Sbjct: 308 GIYTVLVEGDDFNEPVADAVRSILDGHIVLTRELADQGHFPAIDVLKSVSRLRKDVTPED 367

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSE 427
             K    +  L+  +E+  D+  IG Y  G +  +D+AV  V  I DFL+Q   +  + +
Sbjct: 368 VVKAGQKVIRLLAAYEKVEDMINIGAYVKGSNQEIDQAVRLVRPINDFLRQDIEEKFTLQ 427

Query: 428 DVFQEITKKLQ 438
             FQ++   L 
Sbjct: 428 QSFQQMQALLH 438


>gi|61968321|gb|AAX57087.1| ATP synthase beta subunit [Thecacoris madagascariensis]
          Length = 479

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDITGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G            V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTVQRYKELQDIIAILGLDELSQED-RLTVARARKIERFLSQP 422


>gi|317050178|ref|YP_004117826.1| ATP synthase F1 subunit beta [Pantoea sp. At-9b]
 gi|316951795|gb|ADU71270.1| ATP synthase F1, beta subunit [Pantoea sp. At-9b]
          Length = 465

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 114/412 (27%), Positives = 186/412 (45%), Gaps = 15/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MAAGKIVQIIGAVVDVEFPQDAVPQVYSALEVKNGDARLVLEVQQQLGGGVVRTIAMGTS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVP 133
           + +  G  V    +  ++       GR++N LG+PID    L + D S+     I    P
Sbjct: 61  DGLKRGLEVADLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEEDGSVPEVSSIHRAAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     
Sbjct: 121 SYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYS 180

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G
Sbjct: 181 VFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 241 RDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +
Sbjct: 299 VQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 HYDVARGVQSLLQRYQELKDIIAILGMDELSEDD-KLLVARARKIQRFLSQP 409


>gi|254476168|ref|ZP_05089554.1| ATP synthase F1, beta subunit [Ruegeria sp. R11]
 gi|214030411|gb|EEB71246.1| ATP synthase F1, beta subunit [Ruegeria sp. R11]
          Length = 474

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/417 (25%), Positives = 187/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V        + + +         + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVQFDDHLPAILNALTTDNNGKQLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    I       GR++N +G+P+D    +   + +  I    P   ++   
Sbjct: 66  RGQAVADTGAPISIPVGNATLGRILNVVGEPVDEQGPVVAAE-TRAIHQPAPEFSDQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPSIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+ S +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYKVASDVQQILQRYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQ-PFDVA 417


>gi|156622715|dbj|BAF76338.1| ATP synthase beta subunit [Acorus gramineus]
          Length = 487

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEEKIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++     +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLXRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +  V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAXYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI +I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIVIPGLDELSEED-RXTVARARKIERFLSQP 426


>gi|56675899|emb|CAB90061.2| ATP synthase beta subunit [Delosperma echinatum]
          Length = 496

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 48  GRDTVGQPINVXCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRI 107

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +IG
Sbjct: 108 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIG 166

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 167 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 226

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 227 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 286

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 287 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 344

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 345 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAPRVKQTLQRYKELQDIIAI 404

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 405 LGLDELSEEDX-LPVARARKIERFLSQP 431


>gi|34500006|gb|AAQ73585.1| ATP synthase beta subunit [Pasteurella aerogenes]
          Length = 444

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 185/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPRVYDALKVESGLTLEVQQQLG--GGVVRCIALGSSD 58

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR++N LG+PID    +G  D    I    P    +
Sbjct: 59  GLKRGLKVENTGNPISVPVGTKTLGRIMNVLGEPIDEKGPIGAEDA-WAIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R   PLT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTESNVLDKVSLVYGQMNEPPGNRLRVPLTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  ++ E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAVTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A  G YP V P+   SR  D      +   + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYPAVGPIRFTSRQLDPLVVGQEHYDVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|5031153|gb|AAD38087.1|AF093426_1 ATP synthase beta subunit [Pseudowintera colorata]
          Length = 494

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRXAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVHGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGSDELSEED-RLTVARARKIERFLSQP 430


>gi|5758909|gb|AAD50883.1| ATP synthase beta subunit [Rhipogonum elseyanum]
          Length = 496

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|62902823|gb|AAY19326.1| ATP synthase beta subunit [Parnassia laxmannii]
          Length = 473

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 2   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNQVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDRGVPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|34582341|sp|Q9MTX9|ATPB_SCHSP RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688039|emb|CAB89724.1| ATP synthase beta subunit [Schisandra sphenanthera]
          Length = 498

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINL--------DIVYICP 74
           G I+ I      V     +   + + +  +G   D +GQ I +          + V    
Sbjct: 21  GRITQIIGPVLDVAFPPGKMPNINNSLXVKG--RDTVGQQINVTCXVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|260654864|ref|ZP_05860352.1| ATP synthase F1, alpha subunit [Jonquetella anthropi E3_33 E1]
 gi|260630366|gb|EEX48560.1| ATP synthase F1, alpha subunit [Jonquetella anthropi E3_33 E1]
          Length = 504

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 184/424 (43%), Gaps = 15/424 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           +E L +    +   L   + G + S+     TV  L + V  G+ VV +    D+LG  +
Sbjct: 7   IEELRERIRSFDMKLDARETGQVVSLADGIATVYGLDR-VTYGELVVFE---DDSLGMAM 62

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  D V +     G  +  G L    G+   +S      GRV+N LG+ IDG   +  G
Sbjct: 63  NLESDRVGVVLFSDGGGLREGTLCRRGGQAASVSCGDGLIGRVVNPLGEAIDGGAPIV-G 121

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
              M +  +    M+R+ V    KTGI  +D   P+  GQR  +      GK+T+   ++
Sbjct: 122 QKDMPVEREASGVMSRKPVNVPLKTGILAVDALVPVGRGQRELIIGDRQTGKTTIAVDAI 181

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++   + +             + +V + + +SP L+ +AP  A 
Sbjct: 182 LNQKDQNVICIYCAIGQKNSSIAQIHASLRAAGALDYTFIVSSPASDSPSLQYLAPYAAT 241

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            + EYF  +G +VL+I D +++ A + R ++      P    YP  VF    RLLER   
Sbjct: 242 AMGEYFMDQGRDVLIIYDDLSKHAVAYRALSLLLRRSPGREAYPGDVFYLHSRLLERSCR 301

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
            E     G++TA+  +     + +  I  +V SI DG I L   L   G  P V+   SV
Sbjct: 302 LEDHWGGGSMTALPIIETQAGDVSAYIPTNVISITDGQIYLESHLFRSGVRPAVNTGLSV 361

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A  A  + L  +L   + RF E     +   +   +D    +A+     + + L
Sbjct: 362 SRVGGAAQPAGIRALAGNLRVTLARFAELE---VFTQFAGDLDDATREALDSGHRLTEVL 418

Query: 418 KQSP 421
           KQ+P
Sbjct: 419 KQTP 422


>gi|130076692|gb|ABO31966.1| ATPase alpha subunit [Itea virginica]
          Length = 366

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 85/370 (22%), Positives = 153/370 (41%), Gaps = 19/370 (5%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL 124
             + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L   + 
Sbjct: 1   ENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE- 59

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +
Sbjct: 60  RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILN 119

Query: 185 DCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232
                            +   +G++   V + ++     N  + S++V AT+ +   L+ 
Sbjct: 120 QKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQF 179

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    R
Sbjct: 180 LAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 239

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +     + +  I  +V  I DG I     L   G  P 
Sbjct: 240 LLERAAKRSDQTGAGSLTALPVIETQAGDLSAYIPTNVIPITDGQICSETELFYRGIRPA 299

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D       ++ 
Sbjct: 300 INVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRG 356

Query: 411 PIIYDFLKQS 420
             + +  KQ 
Sbjct: 357 ARLTEVPKQP 366


>gi|157285091|gb|ABV31285.1| ATPase [Vibrio ichthyoenteri]
 gi|157285131|gb|ABV31305.1| ATPase [Vibrio ichthyoenteri]
 gi|157285133|gb|ABV31306.1| ATPase [Vibrio ichthyoenteri]
 gi|157285297|gb|ABV31388.1| ATPase [Vibrio scophthalmi]
          Length = 440

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPFADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|63091835|emb|CAH58768.1| ATP synthase alpha chain [Enterococcus hirae]
          Length = 367

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +   D    + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGEIV-TDKVRPVEAMAPGVMQRKSVNEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTILNQKGQDMICIYVAIGQKDSTVRTQVETLKK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL+I D +++ A + RE++
Sbjct: 176 YGAMDYTIVVNAGASQPAPLLYIAPYAGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P VD   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYAGTRPAVDAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|11514059|pdb|1E79|D Chain D, Bovine F1-Atpase Inhibited By Dccd
           (Dicyclohexylcarbodiimide)
          Length = 482

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 191/431 (44%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 12  ATTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 71

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 72  GLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFVEM 130

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 131 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 190

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +     +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 191 GERTREGNDLYHXMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 250

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 251 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 309 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 368

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 369 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 424

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 425 AEVFTGHLGKL 435


>gi|4063554|gb|AAC98335.1| ATP synthase beta subunit [Nicotiana tabacum]
          Length = 456

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           +  D++GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 24  QGRDSVGQPINVACEVQQLLGNNRVRAIAMSATEGLTRGMEVIDTGAPISVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIEVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLLVARARKIERFLSQP 408


>gi|261409677|ref|YP_003245918.1| ATP synthase F1 subunit beta [Paenibacillus sp. Y412MC10]
 gi|329923666|ref|ZP_08279091.1| ATP synthase F1, beta subunit [Paenibacillus sp. HGF5]
 gi|261286140|gb|ACX68111.1| ATP synthase F1, beta subunit [Paenibacillus sp. Y412MC10]
 gi|328941143|gb|EGG37443.1| ATP synthase F1, beta subunit [Paenibacillus sp. HGF5]
          Length = 466

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 22/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQY-------VCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           G + SIT     +     +       V + +  +  G++ D   +V     D  V    +
Sbjct: 4   GRVVSITGAVVDIEFERGHLPEIFNAVKI-EATLEGGRSVDLTLEVSNHLGDNLVRCIAM 62

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G      GR   +   +   GRV N LG+PID   ++   +++  I  + P 
Sbjct: 63  SSTDGLVRGIEAVDLGRPITVPVGSATLGRVFNVLGEPIDNAGAVV-SEVNNPIHREAPA 121

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+VID+  P   G +IG+F G+G+GK+  +     +   +     +
Sbjct: 122 YDELSTQAEMLETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVAIQELINNIAQEHGGISV 181

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +  
Sbjct: 182 FAGVGERTREGNDLYHEMSDSGVINKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEG 241

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ SE+ RL ERI  +  +KG++T+
Sbjct: 242 KDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGRLQERI--TSTKKGSVTS 299

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAWSAD 368
           + ++ V  D++ DP   +  + LD    L R ++E G YP VDPLAS SR+   +    +
Sbjct: 300 IQAIYVPADDYTDPAPATTFAHLDATTNLERKISEMGIYPAVDPLASSSRILAPEIVGEE 359

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQS 420
              +   +  ++ R+ E +DI  I G     +   DKA+  +   +  FL Q+
Sbjct: 360 HYNVAQGVKKILARYNELQDIIAILGMDELSEE--DKAIVGRARRVQRFLSQA 410


>gi|326776582|ref|ZP_08235847.1| ATP synthase F1, alpha subunit [Streptomyces cf. griseus XylebKG-1]
 gi|326656915|gb|EGE41761.1| ATP synthase F1, alpha subunit [Streptomyces cf. griseus XylebKG-1]
          Length = 523

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 90/432 (20%), Positives = 164/432 (37%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALDNFVQSYQPDAASREEVGTVSVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D   P+  GQR  +      GK+ L     
Sbjct: 128 ESRRALELQAPGVMVRKSVHEPMQTGYKAVDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GKRMVELLKQPQ 436


>gi|119350479|gb|ABL63190.1| AtpB [Chlorococcum ellipsoideum]
          Length = 392

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + +  G  V   G+   +       GR+ N LG+P+D    + +G+ +
Sbjct: 2   DNAVRAVSMQPTDGLMRGMDVLDTGKPLNVPVGRDTLGRIFNVLGEPVDNLGPVKQGE-T 60

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I  + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 61  LPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 120

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   +               K  +V    +E P  R   
Sbjct: 121 AKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLPESKVALVYGQMNEPPGARMRV 180

Query: 235 PLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 181 ALTALTMAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTL 240

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDP
Sbjct: 241 QERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDP 298

Query: 354 LASVSRLADKAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +       ++  +   S+   + R++E +DI  I G     +      V +   
Sbjct: 299 LESTSTMLQPWIVGEKHYVTAQSVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARK 357

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 358 IERFLSQP 365


>gi|307195440|gb|EFN77326.1| ATP synthase subunit beta, mitochondrial [Harpegnathos saltator]
          Length = 518

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 193/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +  Q +    + +V   +  + V    +   E + 
Sbjct: 54  GKVVAVIGAVVDVQFEDALPPILNALEVQNRTPRLVLEVAQHLGENTVRTIAMDGTEGLV 113

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  VF  G   RI   A   GR+IN +G+PID    +   D    I +  P  ++    
Sbjct: 114 RGQNVFDSGYPIRIPVGAETLGRIINVIGEPIDERGPI-ATDKLAAIHADAPEFVDMSVE 172

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 233 TREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 292

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 293 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 350

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      + 
Sbjct: 351 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGMEH 410

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 411 YNIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP---FQVAEV 466

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 467 FTGHAGKL 474


>gi|42559056|gb|AAS20214.1| ATP synthase beta subunit [Rhipogonum elseyanum]
          Length = 489

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|17224755|gb|AAL37099.1| ATP synthase beta subunit [Tacca leontopetaloides]
          Length = 484

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|11276511|gb|AAG33879.1| HrcN [Pseudomonas syringae pv. tomato]
          Length = 419

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 152/412 (36%), Positives = 222/412 (53%), Gaps = 13/412 (3%)

Query: 34  YTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG- 91
             + C      +GD   V +   S  L +++    +   +  +G  + I +G  +   G 
Sbjct: 4   ILLECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQVGAPIRPLGI 63

Query: 92  RFRISPSACWCGRVINALGKPI--DGDDSLGKGDLSM---EIMSKVPPAMNRQRVEKGFK 146
             RI       G V++  G+P+  D   +    D       +++   P   R R+ +   
Sbjct: 64  AHRIGVDDTLLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPTQRPRITRSLP 123

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206
           TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++  L+GERGRE+REF+
Sbjct: 124 TGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLIGERGRELREFL 183

Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265
             +       +SV+V ATSD S + R  A  TA  IAE F ++G  VLL+LDS+TRFA +
Sbjct: 184 DHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLLLDSLTRFARA 243

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325
            REI   SGE     G P SV++ LPRL+ER G SE   G+ITA+ +VL++ D+ NDP+A
Sbjct: 244 QREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVLIEQDSMNDPVA 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
           D VRS+LDGHIVL+R LAE G YP +D  AS+SR+       D ++  + L  L+  +++
Sbjct: 302 DEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRDHQRANNRLRQLLAAYKQ 361

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              +  +G Y+ G D + D AV     I  FL+Q   DL      QE    L
Sbjct: 362 VEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ---DLREPVPLQETLDGL 410


>gi|241912858|gb|ACS72107.1| AtpB [Gonatostylis vieillardii]
          Length = 489

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   +    +   + + +V + +++     +   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIKSRDTVSQQMNVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|224178028|ref|YP_002600926.1| CF1 beta subunit of ATP synthase [Pyramimonas parkeae]
 gi|215882695|gb|ACJ71068.1| CF1 beta subunit of ATP synthase [Pyramimonas parkeae]
          Length = 488

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S ++    G I+ I      V         + + ++ +GKN        + +V  +  D 
Sbjct: 9   STSVKNNVGTITQIIGPVLDVAFTPGNMPSIYNAIIVEGKNEAGEDLKVVCEVQTLLGDN 68

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G    +       GR+ N LG+P+D    +   ++++ 
Sbjct: 69  LVRAISMSATDGLMRGMKVVDTGDALSVPVGTSTLGRIFNVLGEPVDEMGPV-ANEMTLP 127

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I  + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 128 IHREAPAFVDLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 187

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 188 AHGGVSVFGGVGERTREGNDLYMEMKESGVINANKLSESKVALVYGQMNEPPGARMRVGL 247

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 248 TALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQE 307

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 308 RI--TSTKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLD 365

Query: 356 SVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +       D        +   + R++E +DI  I G     +      V +   + 
Sbjct: 366 STSTMLQPWILGDEHYDTAQGVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARKVE 424

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 425 RFLSQP 430


>gi|4063562|gb|AAC98339.1| ATP synthase beta subunit [Ruta graveolens]
          Length = 456

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTGGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +       +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQRVKETLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|587507|emb|CAA54205.1| ATPase beta-subunit [Peptococcus niger]
          Length = 427

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 105/363 (28%), Positives = 180/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  +IV    +   + +  G +V        +       GR++N +G PID    +   +
Sbjct: 57  LGGNIVRAIAMSSTDGLMRGMVVTDQESPITVPVGDATLGRLMNVVGDPIDEAGEV-PSE 115

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + +   ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R
Sbjct: 116 TRWPIHRSAPTYVQQNPSKEILETGIKVVDLLCPYVKGGKIGLFGGAGVGKTVLIQELIR 175

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +  ++     + + VGER RE ++ + +      + K+ +V    +E P  R    LT +
Sbjct: 176 NIAYEHGGYSVFAGVGERTREGKDLLVEMRESGVIDKTSLVFGQMNEPPGARMRIALTGL 235

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI 
Sbjct: 236 TVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGTMQERI- 294

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V +V V  D+  DP   +  + LD   VL RS++E+G YP VDPLAS S
Sbjct: 295 -TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLERSISEKGIYPAVDPLASTS 353

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   +  ++  + E +DI  I G     D      V +   I  FL
Sbjct: 354 RILDPRIVGEEHYEIARDVQEVLQEYRELQDIISILGMDELSDEE-KLTVARARRIERFL 412

Query: 418 KQS 420
            QS
Sbjct: 413 SQS 415


>gi|118579045|ref|YP_900295.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379]
 gi|190358211|sp|A1ALL7|ATPB1_PELPD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|118501755|gb|ABK98237.1| ATP synthase F1 subcomplex beta subunit [Pelobacter propionicus DSM
           2379]
          Length = 471

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 18/416 (4%)

Query: 19  LVVQGGYISSITSVYYTVTC-------LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           +    G I+ +      V         +   + + +  ++  +N+  L     +  + V 
Sbjct: 1   MSQNTGKITQVIGAVVDVEFEPGKLPEIYHALRVTNPAINDSENNLVLEVAQHLGENSVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G+           GR+IN +G+P+D    +G  D    I  
Sbjct: 61  TIAMDSTDGLKRGQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIG-NDKENPIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + PP  ++    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 120 EAPPFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARQHG 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +     + +K+ +V    +E P  R    LTA++IAE+F 
Sbjct: 180 GFSVFAGVGERTREGNDLWMEMKETGVLEKTALVYGQMNEPPGARARVALTALSIAEHFR 239

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G
Sbjct: 240 DDEGLDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTKNG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 298 SITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 358 IGEEHYAIARQVQYILQKYKDLQDIIAILGMDELSEED-KLIVARARKIQRFLSQP 412


>gi|112791350|gb|ABI21945.1| ATP synthase beta subunit [Klebsiella pneumoniae]
          Length = 421

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNEVLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGQPVDMKGDIGEEE-RWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|5758905|gb|AAD50879.1| ATP synthase beta subunit [Pentastemona egregia]
          Length = 496

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   +    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVIFPPGKMPNIYNALVVKGRDTIVQQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+TIAEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTIAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|231597|sp|P30158|ATPB_DICDH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|11474|emb|CAA47370.1| atpB [Dictyota dichotoma]
          Length = 481

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/427 (25%), Positives = 190/427 (44%), Gaps = 21/427 (4%)

Query: 11  LAEDYSKNLVVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIR-INL 67
           ++E+ ++   +  GYI+ +   V   V    Q   + + +  + K+   +  +V +  N 
Sbjct: 1   MSENLNREPELNIGYITQVIGPVIDAVFSAGQLPKIYNALEVKSKDGTTIICEVQQLFND 60

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V        +       GR+ N LG+ +D    +G G+  +
Sbjct: 61  NRVRAIAMSATDGLQRGVEVIDTQAPILVPVGKATLGRIFNVLGQTVDNI-EIGTGEDRL 119

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P   + +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 120 PIHRPAPSFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 179

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 180 KAHGGVSVFGGVGERTREGNDLYMEMKESGVINESNLSESKVALVYGQMNEPPGARMRVG 239

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 240 LTALTMAEYFRDINRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQ 299

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +   +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 300 ERI--TSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 357

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +       +   + R++E +DI  I G     +      V +   I
Sbjct: 358 DSTSTMLQPVIVGSEHYDTAQLVKKTLQRYKELQDIIAILGIDELSEED-RLVVDRARKI 416

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 417 ERFLSQP 423


>gi|302747342|gb|ADL63152.1| Atp1 [Antirrhinum majus]
          Length = 349

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQFNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|229577383|ref|NP_001153366.1| ATP synthase subunit beta, mitochondrial [Nasonia vitripennis]
          Length = 517

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 190/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-VIRINLDIVYICPVGIGE 79
           V  G + ++      V    +   + + +  Q ++   + +    +  + V    +   E
Sbjct: 49  VAQGKVVAVIGAVVDVQFDDELPPILNALEVQDRSPRLVLEIAQHLGENTVRTIAMDGTE 108

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI   A   GR+IN +G+PID    +   D    I +  P  ++ 
Sbjct: 109 GLVRGQNVLDTGFPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKLASIHADAPEFVDM 167

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 168 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 227

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +  ++ +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 228 GERTREGNDLYQEMIESGVISLKDKTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQ 287

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 288 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 345

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 346 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIG 405

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 406 AEHYNIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 458


>gi|170076621|ref|YP_001733260.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7002]
 gi|169887483|gb|ACB01191.1| ATP synthase F1, alpha subunit [Synechococcus sp. PCC 7002]
          Length = 512

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 185/434 (42%), Gaps = 15/434 (3%)

Query: 3   KNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ---GKNSDN 58
           + L+ + Q    +   L   + G + S+      V  L   V   + V            
Sbjct: 14  EALQQIQQTLATFPAQLTFRETGVVESVRPGIARVKGL-PNVQADELVYFSRSSAGGEPL 72

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
           LG    ++ D V +  +G    +  GD V+   R   +       GRV+  LG+P+DG  
Sbjct: 73  LGIAFNLDPDEVGVILLGDSHALQAGDEVYRTERVMDVPVGEVLLGRVLTVLGQPLDGRG 132

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L   +    +  +    ++R  V    +TG++V+D   P+  GQR  +      GK+T+
Sbjct: 133 ALKAVEWK-PVEREAAAILDRAPVTVPLQTGLKVVDALIPIGRGQRELIIGDRQTGKTTI 191

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
              ++  + D     +   +G+R   + + I           ++V+VA   +   L+ + 
Sbjct: 192 AIDTILNQKDQDVICLYCAIGQRSAAIAKVIATLREQGAMDYTIVIVAAGQDPLGLQYIT 251

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P  A T+AEYF  +G +VL++ D +T  A + RE++      P    YP  +F    RLL
Sbjct: 252 PYGATTMAEYFMEQGRDVLIVYDDLTHHARTYRELSLLLRRPPGREAYPGDIFYLHSRLL 311

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER     +    G++TA+  +     N +  I  ++ SI DG I L+  L ++  +P VD
Sbjct: 312 ERATHLAEALGGGSLTALPIIETQAQNLSAYIPTNLISITDGQIYLSPELFQKSIFPAVD 371

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+  K   A  + +  +L     +F+E       G     +D    + + +   
Sbjct: 372 VGKSVSRVGGKTQLAAYQAVSGALRLAYAQFQEVEVFARFG---TQLDEQTKQTLQRGKR 428

Query: 413 IYDFLKQSPSDLSS 426
           I + LKQ+ S L +
Sbjct: 429 IREVLKQNQSQLLT 442


>gi|15705378|gb|AAL05617.1| AtpB [Doryphora sassafras]
          Length = 487

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQMNVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|68139365|gb|AAY86047.1| ATP synthase beta subunit [Hernandia ovigera]
          Length = 458

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPTIVGEEHYETAQRVKQTSQRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|114563|sp|P05440|ATPB_RHOBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|45980|emb|CAA77303.1| ATPase beta subunit [Rhodobacter blasticus]
          Length = 478

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 105/424 (24%), Positives = 185/424 (43%), Gaps = 20/424 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
              V  G ++ +      V        + + +         + +V   +  + V    + 
Sbjct: 4   ATTVSKGKVTQVIGAVVDVQFEGVLPAILNALETTNNGKKLILEVAQHLGENTVRCIAMD 63

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    +       GR++N +G+PID    +   +    I  K P  
Sbjct: 64  ATEGLVRGAPVSDSGTPISVPVGNATLGRILNVVGEPIDERGPIAATEKRA-IHQKAPDF 122

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 123 QSQSTESQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGYSVF 182

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +++             K  +V    +E P  R    LT +T+AE 
Sbjct: 183 AGVGERTREGNDLYHEFIESGVINIDDLEKSKVALVYGQMNEPPGARARVALTGLTLAEQ 242

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  +
Sbjct: 243 FRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTK 300

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V ++ V  D+  DP   +  + LD    L+R+++E G YP VDPL S SRL D 
Sbjct: 301 AGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRLMDP 360

Query: 364 AW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +      ++  ++ R++  +DI  I G     +      V +   I  FL Q P 
Sbjct: 361 QILGEEHYNTARAVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PF 418

Query: 423 DLSS 426
           D++ 
Sbjct: 419 DVAQ 422


>gi|28188331|gb|AAL92545.1| ATP synthase beta subunit [Coleochaete sp. 18b3]
          Length = 402

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSPTDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGKEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|3660252|pdb|1NBM|E Chain E, The Structure Of Bovine F1-Atpase Covalently Inhibited
           With 4-Chloro-7-Nitrobenzofurazan
          Length = 480

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 113/431 (26%), Positives = 192/431 (44%), Gaps = 21/431 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 12  ATTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 71

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   RI       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 72  GLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFVEM 130

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 131 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 190

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 191 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 250

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 251 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 308

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 309 TSVQAIXVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 368

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q       
Sbjct: 369 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQV 424

Query: 427 EDVFQEITKKL 437
            +VF     KL
Sbjct: 425 AEVFTGHLGKL 435


>gi|83854832|ref|ZP_00948362.1| ATP synthase subunit B [Sulfitobacter sp. NAS-14.1]
 gi|83842675|gb|EAP81842.1| ATP synthase subunit B [Sulfitobacter sp. NAS-14.1]
          Length = 474

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 107/422 (25%), Positives = 186/422 (44%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V        + + VV +      + +V   +  + V    +  
Sbjct: 1   MANAVGKITQVIGAVVDVQFEDHLPEILNAVVTENHGKKLILEVAQHLGENTVRTIAMDA 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V        I       GR++N +G+ ID    +   +    I +  P   
Sbjct: 61  TEGLVRGQRVEDTDAPISIPVGNATLGRIMNVVGEAIDEKGDIQSAE-RRSIHADAPEFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 EQSTTSEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +  N          +  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMIESNVINPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + 
Sbjct: 240 RDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKS 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D  
Sbjct: 298 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPS 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +   +   +  ++ R++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 358 IVGEEHYNVARDVQGILQRYKSLQDIIAILGMDELSEDD-KLTVARARKIERFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|68485407|ref|XP_713381.1| hypothetical protein CaO19.13098 [Candida albicans SC5314]
 gi|68485502|ref|XP_713334.1| hypothetical protein CaO19.5653 [Candida albicans SC5314]
 gi|46434817|gb|EAK94217.1| hypothetical protein CaO19.5653 [Candida albicans SC5314]
 gi|46434865|gb|EAK94264.1| hypothetical protein CaO19.13098 [Candida albicans SC5314]
          Length = 512

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/402 (26%), Positives = 181/402 (45%), Gaps = 19/402 (4%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
             +  G     L     +  + V    +   E +  G  V   G    +       GR+I
Sbjct: 71  LTLKNGDQDLVLEVAQHLGENTVRAIAMDGTEGLVRGTEVNDTGAPISVPVGRGTLGRII 130

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+PID    +   +    I ++ P  + +    +  +TGI+V+D+  P   G +IG+
Sbjct: 131 NVVGEPIDDRGPIECKEKK-PIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGGKIGL 189

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKS 217
           F G+G+GK+  +     +        S+   VGER RE  +   +         +   K 
Sbjct: 190 FGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGDSKV 249

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +
Sbjct: 250 ALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRI 309

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  L ERI  +  +KG++T+V +V V  D+  DP   +  + LD   
Sbjct: 310 PSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 367

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R ++E G YP VDPL S SRL D +    +   + + +   +  ++  +DI  I G 
Sbjct: 368 VLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATGVQQTLQAYKSLQDIIAILGM 427

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
               +      V +   I  FL Q     +  +VF  I  +L
Sbjct: 428 DELSEAD-KLTVERARKIQRFLSQP---FAVAEVFTGIPGRL 465


>gi|119350545|gb|ABL63223.1| AtpB [Selenastrum capricornutum]
          Length = 387

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + +  G  V   G+   +       GR+ N LG+P+D    + K + +
Sbjct: 2   DNRVRAVAMNPTDGLMRGMEVLDTGKPLSVPVGQATLGRIFNVLGEPVDELGPV-KNEAT 60

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 61  LPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 120

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                   + + VGER RE  +   +               K  +V    +E P  R   
Sbjct: 121 AKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRV 180

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 181 ALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGSL 240

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 241 QERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDP 298

Query: 354 LASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +       D        +   + R++E +DI  I G     +      V +   
Sbjct: 299 LDSTSTMLQPWIVGDKHYDCAQRVKITLQRYKELQDIIAILGLDELSEED-RLVVARARK 357

Query: 413 IYDFLKQS 420
           I   L Q 
Sbjct: 358 IERLLSQP 365


>gi|14718208|gb|AAK72842.1| ATP synthase beta subunit [Sassafras albidum]
          Length = 486

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+G + L+     +        S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGXTVLIMELINNIAKAHGGXS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGXVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|310659420|ref|YP_003937141.1| f1 sector of membrane-bound ATP synthase subunit beta [Clostridium
           sticklandii DSM 519]
 gi|308826198|emb|CBH22236.1| F1 sector of membrane-bound ATP synthase, beta subunit [Clostridium
           sticklandii]
          Length = 465

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 193/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      +   ++ +  L + V  +      + +V   +  D V    +   + +
Sbjct: 7   GTVVQIIGPVLDIKFPTEELPNLLNAVEIEHDGRKIVVEVSQHVGNDTVRCIAMSSTDGL 66

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+P+D  + +G G+  + I  + P   +++ 
Sbjct: 67  VRGIKAVDTGESITVPVGRDTLGRIFNLLGEPVDNMEYVGTGN-RLPIHREAPAYEDQET 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   IS+   VGE
Sbjct: 126 STEILETGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKEHGGISVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +  E+      + K+V+V    +E P  R    L+ +T+AEYF  +   +VLL 
Sbjct: 186 RTREGNDLYEEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGLTMAEYFRDQEGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R++A  G YP VDPL S SR+        +   +  
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRNIASLGIYPAVDPLDSTSRILSADIVGKEHYDVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 364 DVQSILQRYKELQDIIAILGMDELSDED-KLTVSRARKIQRFLSQP 408


>gi|221078767|gb|ACL99458.1| ATP synthase beta subunit [Diospyros senensis]
 gi|221078769|gb|ACL99459.1| ATP synthase beta subunit [Diospyros squarrosa]
          Length = 465

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G      G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEAIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|182435958|ref|YP_001823677.1| F0F1 ATP synthase subunit alpha [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|226739943|sp|B1W0A5|ATPA_STRGG RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|178464474|dbj|BAG18994.1| putative ATP synthase alpha chain [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 523

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 90/432 (20%), Positives = 164/432 (37%), Gaps = 24/432 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALDNFVQSYQPDAASREEVGTVSVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    +     + GRV++ LG PIDG   +   
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVQRTGEVLSVGVGEGYLGRVVDPLGNPIDGLGEI-AT 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  M R+ V +  +TG + +D   P+  GQR  +      GK+ L     
Sbjct: 128 ESRRALELQAPGVMVRKSVHEPMQTGYKAVDAMVPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++   G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYDGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++   L   + +F E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMKQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSP 421
              + + LKQ  
Sbjct: 425 GKRMVELLKQPQ 436


>gi|157285105|gb|ABV31292.1| ATPase [Listonella pelagia]
          Length = 430

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 178/420 (42%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLTD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALENTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|111283726|gb|ABH09213.1| ATPase beta subunit [Goebelobryum unguiculatum]
          Length = 449

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 11  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 70

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 71  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 129

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K   
Sbjct: 130 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAS 189

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 190 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 249

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 250 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 307

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDP  S S +        +  +    +   + R++E +DI  I G   
Sbjct: 308 SRGLAAKGIYPAVDPPDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 367

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 368 LSEED-RLTVARARKIERFLSQP 389


>gi|19033083|gb|AAL83526.1|AF408798_1 ATP synthase beta subunit [Mesotaenium caldariorum]
          Length = 402

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGENRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVNTS- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTLPIHRSAPEFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGSEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLVVARA 357

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 358 RKVERFLSQP 367


>gi|13236756|gb|AAK14683.1| ATP synthase beta subunit [Reinhardtia simplex]
          Length = 498

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--GDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMDSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|19033059|gb|AAL83514.1|AF408786_1 ATP synthase beta subunit [Nitella opaca]
          Length = 402

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGIPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|156622719|dbj|BAF76340.1| ATP synthase beta subunit [Asarum takaoi]
          Length = 484

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|227529637|ref|ZP_03959686.1| H(+)-transporting two-sector ATPase [Lactobacillus vaginalis ATCC
           49540]
 gi|227350427|gb|EEJ40718.1| H(+)-transporting two-sector ATPase [Lactobacillus vaginalis ATCC
           49540]
          Length = 474

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/366 (30%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + +  G  V + G    +       GRV N LG+P+D     G
Sbjct: 46  ALELGDGVVRTIAMDGTDGLQRGMEVENTGAPISVPVGDDTLGRVFNVLGEPVDNGPKFG 105

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                M I    P         +  +TGI+VID+  P   G +IG+F G+G+GK+ L+  
Sbjct: 106 PDAKRMPIHRDAPKYDELNNNTEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQE 165

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
              +       IS+   VGER RE  +   +     + +K+ +V    +E P  R    L
Sbjct: 166 LIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKTAMVYGQMNEPPGARMRVAL 225

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 226 TGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQE 285

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 286 RI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLA 343

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S  L  +    +  ++ + + H++ R+ E +DI  I G     D      V +   I 
Sbjct: 344 STSTALTPEIVGKEHYEVATEVQHVLQRYHELQDIISILGMDELSDDE-KVIVARARRIQ 402

Query: 415 DFLKQS 420
           +FL QS
Sbjct: 403 NFLSQS 408


>gi|157285233|gb|ABV31356.1| ATPase [Vibrio pacinii]
 gi|157285307|gb|ABV31393.1| ATPase [Vibrio pacinii]
          Length = 441

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 171/420 (40%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +             + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPNG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +   S  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKQSSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEVYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|29726124|gb|AAD00589.2| ATP synthase beta subunit [Sanguinaria canadensis]
          Length = 491

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 309 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +D+  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTSQRYKELQDMIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|292559515|ref|YP_003540938.1| ATP synthase CF1 beta chain [Phoenix dactylifera]
 gi|28195665|gb|AAO27799.1| ATP synthase beta subunit [Phoenix dactylifera]
 gi|290790923|gb|ADD63178.1| ATP synthase CF1 beta chain [Phoenix dactylifera]
 gi|294620584|gb|ADF28153.1| ATP synthase CF1 beta chain [Phoenix dactylifera]
          Length = 498

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4519346|dbj|BAA75588.1| ATP synthase beta-subunit [Chlamydomonas moewusii]
          Length = 376

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I  K
Sbjct: 1   VSMQPTDGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGPV-KVEDTLPIHRK 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D   +   ++   + R++E +DI  I G     +    + V +   I  FL 
Sbjct: 298 MLQPWILGDKHYQTAQNVKKTLQRYKELQDIIAILGLDELSEDD-RQTVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|332764011|gb|EGJ94248.1| ATP synthase F1, beta subunit [Shigella flexneri 2930-71]
          Length = 435

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFTHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|17224761|gb|AAL37102.1| ATP synthase beta subunit [Tacca plantaginea]
          Length = 481

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|85860961|ref|YP_463163.1| F0F1 ATP synthase subunit alpha [Syntrophus aciditrophicus SB]
 gi|124007205|sp|Q2LY34|ATPA2_SYNAS RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|85724052|gb|ABC78995.1| F0F1-type ATP synthase, alpha subunit [Syntrophus aciditrophicus
           SB]
          Length = 519

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/442 (24%), Positives = 193/442 (43%), Gaps = 16/442 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +++   TL  +    +  L   + G +S +       + L  +V   + VV  G   + L
Sbjct: 15  LEQTFSTLDAVLSGQNARLQEKEVGTVSFVGQGIVRASGL-PHVRSEELVVFPG---NLL 70

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G V  ++LD + I  +   E+IS G  V   GR   +       GRV++ +G+P+D    
Sbjct: 71  GLVFNVDLDEIGIITLDHTEDISAGSAVRRTGRVLDVPVGEALLGRVLDPMGRPLDNRGE 130

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      + +  + P  M+R  V    +TGI+VID    +  GQR  +      GK+ ++
Sbjct: 131 VAAA-RRLPLEREAPAVMDRAPVSVPLQTGIKVIDSLIAIGRGQRELILGDRQTGKTAII 189

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
             ++  + D     I   +G++  +    +        L   ++VVA  ++ P L+ +AP
Sbjct: 190 LDTIINQHDKNVICIYCAIGKQSADTARVVSVLESFRTLPYCIIVVAAGEDPPGLQYIAP 249

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A ++ EYF  +G +VL+I D +TR A + RE++      P    YP  +F    R+LE
Sbjct: 250 YAATSMGEYFMKRGKDVLVIYDDLTRHARAYRELSLLLRRPPGREAYPGDIFYIHARMLE 309

Query: 296 RIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  +  +  + +  I  ++ SI DG I L+  L ++G  P +D 
Sbjct: 310 RATHLREELGGGSLTAIPIIETEAQDISAYIPTNLISITDGQIYLSSRLFQKGILPAIDV 369

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  K      + +   L     +FEE       G     +D    + + +   +
Sbjct: 370 GKSVSRVGGKTQLPAYRTVAGDLRLSYSQFEELETFSRFG---TRLDEETRRKLERGRRV 426

Query: 414 YDFLKQSP-SDLSSEDVFQEIT 434
            + LKQ   + L   D    + 
Sbjct: 427 REILKQKQYNPLCVADQIAALL 448


>gi|584810|sp|Q08807|ATPB_GALSU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|396525|emb|CAA47241.1| H(+)-transporting ATP synthase [Cyanidium caldarium]
          Length = 476

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 115/413 (27%), Positives = 186/413 (45%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           GYIS I      +   +  +  + + +  + KN     +V ++  D  V    +   E +
Sbjct: 9   GYISQIIGPVIDIEFPNGTLPKIYNAISIKHKNKTITCEVQQLLGDNRVRTVAMNSTEGL 68

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +    C  GR+ N LG+P+D   ++   D  + I    P     + 
Sbjct: 69  QRGIEAIDTGSAITVPVGKCTLGRIFNVLGEPVDELGAIS-TDRKLPIHRASPLFTQLET 127

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 128 KPSIFETGIKVIDLLAPYKRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVGE 187

Query: 198 RGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SK 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF  + 
Sbjct: 188 RTREGNDLYVEMKESKVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDNN 247

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 248 KQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKEGSIT 305

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       D
Sbjct: 306 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPQIVGD 365

Query: 369 EKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 EHYVTAQRVKENLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|205375345|ref|ZP_03228135.1| F0F1 ATP synthase subunit beta [Bacillus coahuilensis m4-4]
          Length = 470

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-----CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           G++  +T     V   S  +      +       G  +D   +V + +  D V    +  
Sbjct: 4   GHVIQVTGPVVDVKFPSGQLPELYNAIRVVSQANGVTTDLTLEVALHLGDDTVRTIAMDS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + ++ G  V   G    +       GRV N LG+ ID D  +  G     I    P   
Sbjct: 64  TDGLTRGMDVIDTGAPITVPVGDVTLGRVFNVLGETIDLDAPIEAGARRDPIHRTAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 QLSTETEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    LT +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLFHEMTDSGVIKKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +    G++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGQLQERI--TSTNVGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           ++ V  D++ DP   +  + LD    L R L+E G YP VDPLAS SR         +  
Sbjct: 302 AIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + R++E +DI  I G     D      VH+   +  FL Q+
Sbjct: 362 SIARQVQSTLQRYKELQDIIAILGMDELSDDD-KLVVHRARRVQFFLSQN 410


>gi|37720965|gb|AAN32485.1| ATP synthase beta subunit [Palisota bogneri]
          Length = 484

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 8   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAIA 65

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 66  MSATDGLMRGMEVIDTGVPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRITSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +   K F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLETKLKIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYIEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKGGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                     +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGAKHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|118579930|ref|YP_901180.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379]
 gi|190358235|sp|A1AP52|ATPB2_PELPD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|118502640|gb|ABK99122.1| ATP synthase F1 subcomplex beta subunit [Pelobacter propionicus DSM
           2379]
          Length = 471

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 18/416 (4%)

Query: 19  LVVQGGYISSITSVYYTVTC-------LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
           +    G I+ +      V         +   + + +  ++  +N+  L     +  + V 
Sbjct: 1   MSQNTGKITQVIGAVVDVEFEPGKLPEIYHALRVTNPAINDSENNLVLEVAQHLGENSVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G+           GR+IN +G+P+D    +G  D    I  
Sbjct: 61  TIAMDSTDGLKRGQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIG-NDKENPIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + PP  ++    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 120 EAPPFEDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARQHG 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +     + +K+ +V    +E P  R    LTA++IAE+F 
Sbjct: 180 GFSVFAGVGERTREGNDLWMEMKETGVLEKTALVYGQMNEPPGARARVALTALSIAEHFR 239

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G
Sbjct: 240 DDEGLDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTKNG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 298 SITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQI 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 358 IGEEHYAIARQVQYILQKYKDLQDIIAILGMDELSEED-KLIVARARKIQRFLSQP 412


>gi|170779040|gb|ACB36913.1| F1-ATP synthase beta subunit [Litopenaeus vannamei]
          Length = 525

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 189/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G + ++      V    +   + + +    ++   + +V   +  + V    +   E
Sbjct: 55  VANGSVVAVIGAVVDVQFDGELPPILNALEVANRSPRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+ V   G    I       GR+IN +G+PID    +     S  I ++ P  +  
Sbjct: 115 GLIRGNAVVDTGSPISIPVGPGTLGRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  S+  ++   +  +DI  I G     +      V +   I  FL Q 
Sbjct: 412 HEHYNVARSVQKILQDHKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 464


>gi|157285093|gb|ABV31286.1| ATPase [Vibrio penaeicida]
          Length = 409

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +      +  D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDSIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGQKVTELMKQKQ 399


>gi|317178566|dbj|BAJ56354.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F30]
          Length = 469

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQVVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|114509204|gb|ABI75170.1| ATPase alpha subunit [Hydrocharis morsus-ranae]
          Length = 358

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 93/363 (25%), Positives = 156/363 (42%), Gaps = 19/363 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V      S   G  + +  D V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEFA---SGVKGIALNLENDNVGIVIFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS----------DCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +      +          +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKEKENDKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELA 355

Query: 382 RFE 384
           ++ 
Sbjct: 356 QYR 358


>gi|21684877|emb|CAD11565.1| ATP synthase beta subunit [Chorizandra enodis]
          Length = 487

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 72

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   +  + G  V   G   R+       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGXTRGMEVIDTGAALRVPVGGVTLGRIFNVLGEPVDNLGPVDTS-TTFPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFVQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYIEMKESGVINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V PL S S + 
Sbjct: 310 TKKGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPNIVGEEHYETAQEVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|324986420|ref|YP_004276291.1| ATP synthase CF1 alpha subunit [Pinus monophylla]
 gi|323522515|gb|ADX94857.1| ATP synthase CF1 alpha subunit [Pinus monophylla]
          Length = 507

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 95/430 (22%), Positives = 168/430 (39%), Gaps = 19/430 (4%)

Query: 4   NLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
            ++ ++ +     K       V   G +  +      +  L + V  G+ V         
Sbjct: 5   QIDEISNIIRKKIKQYNDAVGVGNLGTVLQVGDGIVRIHGLYE-VMAGELVEF---GDGT 60

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
           +G  + +  D V    +G G  I  G  V   G+  +I  S  + GRV+NAL +      
Sbjct: 61  VGIALNLESDNVGAVLMGDGLMIKEGSSVRATGKIAQIPVSDAYLGRVVNALAQXX-XXX 119

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
                             ++R+ V +  +TG+  ID   P+  GQR  +      GK+ +
Sbjct: 120 XXXXXXXXXXXXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAV 179

Query: 178 LSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234
            +    +        +   +G+R   V + +  +        ++VV  T+D    L+ +A
Sbjct: 180 ATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPATLQYLA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLL
Sbjct: 240 PYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLL 299

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +  +G+ITA+  V     + +  I  +  SI DG I  +  L   G  P ++
Sbjct: 300 ERAAKLSSQLGEGSITALPIVETQAGDVSAYIPTNAISITDGQIFSSADLFNAGIRPAIN 359

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     K++   L   + +F E         +   +D      + +   
Sbjct: 360 VGISVSRVGSAAQIKAMKEVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQR 416

Query: 413 IYDFLKQSPS 422
           + + LKQS S
Sbjct: 417 LRELLKQSQS 426


>gi|224830518|gb|ACN66354.1| ATP synthase beta chain [Cocculus orbiculatus]
          Length = 489

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRITQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P++    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVENLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|157285087|gb|ABV31283.1| ATPase [Vibrio halioticoli]
 gi|157285183|gb|ABV31331.1| ATPase [Vibrio halioticoli]
 gi|157285189|gb|ABV31334.1| ATPase [Vibrio halioticoli]
 gi|157285259|gb|ABV31369.1| ATPase [Vibrio neonatus]
          Length = 441

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 170/407 (41%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---KYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPINAA-LTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDTTKKQLDHGAKVTELMKQKQ 399


>gi|89242532|gb|ABD64624.1| ATPase beta subunit [Hernandia ovigera]
          Length = 436

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTVGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPTIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|21633453|gb|AAM52201.1| ATP synthase beta subunit [Cuscuta sp. RGO 90-12]
          Length = 489

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 181/413 (43%), Gaps = 22/413 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           GYI  I      V         + + +V Q  N     +V ++  +  V    +   + +
Sbjct: 20  GYIVQIIGPVLDVAFSPGTMPSIFNALVVQELN--VTCEVQQLLGNNQVRAVAMSDTDGL 77

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LG+P+D    +    +S  I    P  +    
Sbjct: 78  MRGMEVIDTGGPISVPVGGSTLGRIFNVLGEPVDQLGPVEIHKMS-PIHRSAPAFIKLDT 136

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 137 RLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGE 196

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 197 RTREGNDLYMEMKESGVINQQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 256

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 257 RQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSIT 314

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +       +
Sbjct: 315 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGE 374

Query: 369 EK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              K    +   + R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 375 HHYKTAQRVKQTLQRYKELQDIIAILGLDELSDED-RLTVARARKIERFLSQP 426


>gi|157285063|gb|ABV31271.1| ATPase [Vibrio pacinii]
          Length = 441

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 94/420 (22%), Positives = 171/420 (40%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +             + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPNG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +   S  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKQSSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEVYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|112791370|gb|ABI21955.1| ATP synthase beta subunit [Brenneria alni]
          Length = 421

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           D +         + +V + +   +V    +G  + +  G  V + G    +       GR
Sbjct: 3   DALEVDNDTEKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLNVTNLGHAIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGDPVDMKGDIGEEE-RWAIHRPAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ RF+E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRFQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|27435896|gb|AAO13276.1| ATP synthase beta subunit [Sagittaria latifolia]
          Length = 489

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   D  GQ I +  ++        V    
Sbjct: 13  GRIDQIIGPVLDVAFSPGKMPYIYNALIVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  MSATDGLTRGMEVMDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENITKSKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 426


>gi|312285281|gb|ADQ64382.1| ATP synthase beta subunit [Tinospora esiangkara]
 gi|312285283|gb|ADQ64383.1| ATP synthase beta subunit [Tinospora smilacina]
          Length = 469

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D  GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P  +   
Sbjct: 63  LMRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|312285257|gb|ADQ64370.1| ATP synthase beta subunit [Rhaptonema sp. McPherson 18854]
          Length = 469

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 412


>gi|291549096|emb|CBL25358.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus torques
           L2-14]
          Length = 464

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 188/407 (46%), Gaps = 15/407 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +         + +V   +  + V    +   E +
Sbjct: 4   GRIVQVMGPVVDVVFENGDLPFIKDALEVDNNGKKCIMEVAQHLGNNEVRCLMLAASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ ID  + +        I  + P   ++  
Sbjct: 64  CKDMEVTATGAGIQVPVGEQTLGRLFNVLGETIDNGEPITDSK-KWVIHRQPPTFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWTEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ +
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVAN 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 361 KVIAILQKYKELQDIIAILGMEELSDE--DKATVMRARKIQKFLSQP 405


>gi|288816879|gb|ADC55252.1| mitochondrial ATP synthase subunit beta precursor [Litopenaeus
           vannamei]
          Length = 525

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 189/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G + ++      V    +   + + +    ++   + +V   +  + V    +   E
Sbjct: 55  VANGSVVAVIGAVVDVQFDGELPPILNALEVANRSPRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+ V   G    I       GR+IN +G+PID    +     S  I ++ P  +  
Sbjct: 115 GLIRGNAVVDTGSPISIPVGPGTLGRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLYHEMIESGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  S+  ++   +  +DI  I G     +      V +   I  FL Q 
Sbjct: 412 HEHYNVARSVQKILQDHKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 464


>gi|7708274|emb|CAB90062.1| ATP synthase beta subunit [Diospyros kaki]
          Length = 486

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 42  KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 101

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 102 IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 160

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 161 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 220

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I R   +  E++  
Sbjct: 221 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRXVQAGSEVSAL 280

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 281 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 338

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 339 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 398

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 399 ILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|13236708|gb|AAK14659.1| ATP synthase beta subunit [Trithrinax campestris]
          Length = 497

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGDPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|148787945|gb|ABR12222.1| ATP synthase beta subunit [Philydrella drummondii]
          Length = 431

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 3   LGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TR 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  TTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 121

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 122 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARM 181

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 182 RVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 241

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 242 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 299

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 300 DPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 358

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 359 RKIERFLSQP 368


>gi|124361818|gb|ABN09351.1| ATP synthase beta subunit [Styrax benzoin]
          Length = 465

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 178/418 (42%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSD----NLGQVIRINLDI-VYICPVG 76
           G I  I      V      +       VV      D       +V ++  +  V    + 
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKVRDTVDQPINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P  
Sbjct: 61  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|7706854|emb|CAB90083.1| ATP synthase beta subunit [Aucuba japonica]
          Length = 484

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 173/385 (44%), Gaps = 19/385 (4%)

Query: 51  HQGKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINA 108
             G+  + + +V ++  +  V    +   + ++ G  V   G    +       GR+ N 
Sbjct: 47  IAGQPINVICEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGSTLGRIFNV 106

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +IG+F 
Sbjct: 107 LGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFG 165

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKS 217
           G+G+GK+ L+     +       +S+ G   ER RE  +   +               K 
Sbjct: 166 GAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKV 225

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LTA+ +AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 226 ALVYGQMNEPPGARMRVGLTALPMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRM 285

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   
Sbjct: 286 PSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATT 343

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G 
Sbjct: 344 VLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGL 403

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
               +      V +   I  FL Q 
Sbjct: 404 DELSEED-RLTVARARKIERFLSQP 427


>gi|323715462|gb|ADY04799.1| ATP synthase beta subunit [Deutzia scabra]
 gi|323715464|gb|ADY04800.1| ATP synthase beta subunit [Deutzia corymbosa]
          Length = 483

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V + +++     +   +V ++  +  V    + 
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKSQDTASQPINVTCEVQQLLGNNRVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P  
Sbjct: 70  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRCAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 129 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 189 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 RIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|288904998|ref|YP_003430220.1| F0F1 ATP synthase beta chain [Streptococcus gallolyticus UCN34]
 gi|306831069|ref|ZP_07464230.1| ATP synthase F1 sector beta subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977965|ref|YP_004287681.1| F0F1 ATP synthase subunit beta [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731724|emb|CBI13285.1| F0F1 ATP synthase beta chain [Streptococcus gallolyticus UCN34]
 gi|304426635|gb|EFM29746.1| ATP synthase F1 sector beta subunit [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177893|emb|CBZ47937.1| F0F1 ATP synthase subunit beta [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 468

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 114/413 (27%), Positives = 194/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLDI----VYICP 74
           +  G I+ +      V   +  +   + + ++       +   V+ + L++    V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFAAGEKLPEINNALIVYKDGDKSQKIVLEVALELGDGLVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  VF  GR   +       GRV N LG  ID D+   +      I  K P
Sbjct: 61  MESTDGLTRGLEVFDTGRAISVPVGKETLGRVFNVLGDTIDLDEPFAEDAPREPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 AFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQ 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYEVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|254491137|ref|ZP_05104318.1| ATP synthase F1, beta subunit [Methylophaga thiooxidans DMS010]
 gi|224463650|gb|EEF79918.1| ATP synthase F1, beta subunit [Methylophaga thiooxydans DMS010]
          Length = 458

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      +  + D +  +        Q  ++   +V    +G  +
Sbjct: 1   MSSGKIVQIIGAVVDVEFPHDALPKVYDALTVEEAGLTLEVQ-QQLGDGVVRAIAMGTTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V + G    +       GR+++ LGKPID    +G+ +    I  K P     
Sbjct: 60  GLKRDLAVSNTGEAISVPVGQKTLGRIMDVLGKPIDEKGDIGEEE-RWGIHRKAPKFDEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 119 AASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N + K  +V    +E P  R    LT +T+AE+F  +G +VL 
Sbjct: 179 GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLF 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+RS+AE G YP +DPL S SR  D      D   + 
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRSIAELGIYPAIDPLDSTSRQLDPLVVGNDHYNIA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + + R++E +DI  I G     +     +V +   I  F+ Q 
Sbjct: 357 RGVQNTLQRYKELKDIIAILGMDELSEED-KMSVSRARKIQRFMSQP 402


>gi|89242536|gb|ABD64626.1| ATPase beta subunit [Ranunculus sp. Qiu 95024]
          Length = 436

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|114329663|ref|YP_740482.1| ATP synthase CF1 beta subunit [Citrus sinensis]
 gi|122166176|sp|Q09MH1|ATPB_CITSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|113952629|gb|ABI49027.1| ATP synthase CF1 beta subunit [Citrus sinensis]
          Length = 498

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|52082879|gb|AAU26020.1| ATPase beta subunit [Houttuynia cordata]
          Length = 474

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 28/417 (6%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGI 77
           +  I  V        +   + + +V +G+  D +GQ I +  ++        V    +  
Sbjct: 1   VQIIGPVLDVAFSPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSA 58

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +
Sbjct: 59  TDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFI 117

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 118 QLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 177

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 178 GVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 237

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++
Sbjct: 238 RDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKE 295

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 296 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPR 355

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 IVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|7708296|emb|CAB90079.1| ATP synthase beta subunit [Ercilla volubilis]
          Length = 490

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D +GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 48  GRDTVGQPINVXCEVQQLLGNNRVRAVAMSATDVLTRGMEVIDTGAPLSVPVGGATLGRI 107

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +IG
Sbjct: 108 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIG 166

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 167 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 226

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 227 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 286

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 287 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 344

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 345 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 404

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 405 LGLDELSEED-RLTVARARKIERFLSQP 431


>gi|461565|sp|P35110|ATPB_CHLLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|299279|gb|AAB25774.1| F-ATPase beta subunit [Chlorobium limicola]
          Length = 462

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 195/428 (45%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +    ++   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFAEGQLPSILDALTVTRQDGSKL--VLETQQHLGEERVRRIAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G    + G+  ++       GR++N +G PIDG   +     S  I    P 
Sbjct: 59  EGTDGLVRGMSAKNTGKPIQVPVGEEVLGRMLNVVGDPIDGKGPVL-SKKSYSIHRTAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +   ++    +
Sbjct: 118 FDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGFSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   + +    + K+ +V    +E P  R    LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEG 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI  +  +KG++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGELQDRI--TSTKKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  ++ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYDTAQAVKQILQRYKDLQDIIAILGMDELSDDD-KLVVARARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|324986519|ref|YP_004276389.1| ATP synthase CF1 beta subunit [Pinus nelsonii]
 gi|323522707|gb|ADX94955.1| ATP synthase CF1 beta subunit [Pinus nelsonii]
          Length = 492

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G +V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMIVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +   I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVD-ARIKSPIHRPAPTFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|112791360|gb|ABI21950.1| ATP synthase beta subunit [Serratia marcescens]
          Length = 421

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 105/381 (27%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  +      + +V + +   +V    +G  + +  G  V +      +       GR
Sbjct: 3   DALEVENGTEKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNLDHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+PID    +G+ +    I    P        ++  +TGI+V+D+  P   G ++
Sbjct: 63  IMNVLGQPIDMKGDIGEEE-RWAIHRAAPSYEELSSSQELLETGIKVMDLICPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           ++A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 NIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|269123790|ref|YP_003306367.1| ATP synthase F1, beta subunit [Streptobacillus moniliformis DSM
           12112]
 gi|268315116|gb|ACZ01490.1| ATP synthase F1, beta subunit [Streptobacillus moniliformis DSM
           12112]
          Length = 464

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 182/381 (47%), Gaps = 12/381 (3%)

Query: 48  FVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRV 105
             ++       + +V   +  ++V    +   + +  G D++   G  ++       GR+
Sbjct: 29  LEIYYEDGKKIVAEVQAHLGNNVVRAVSMTSTDGLKRGVDVIDTGGPIKVPVGKETLGRI 88

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+ +D  D +   +    I  K P    ++   +  +TGI+V+D+  P   G +IG
Sbjct: 89  FNVLGETVDNGDEIITEE-RHSIHKKAPEFEEQETHSEILETGIKVVDLLAPYLKGGKIG 147

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           +F G+G+GK+ L+     +         + + VGER RE R+   +      + K+ +V 
Sbjct: 148 LFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMRESGVINKTALVY 207

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    L+A+T+AEYF  K   NVLL +D+I RF  +  E++   G +P A 
Sbjct: 208 GQMNEPPGARLRVALSALTMAEYFRDKEGQNVLLFIDNIFRFTQAGSEVSALLGRMPSAV 267

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +++  L ERI  +  +KG+IT+V +V V  D+  DP   +  S LD   VL+R
Sbjct: 268 GYQPNLATDMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSR 325

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPLAS SR+ +      +  K+      ++ R++E +DI  I G     
Sbjct: 326 QIASLGIYPAVDPLASTSRILEAEIVGNEHYKVARETVKVLQRYKELQDIIAILGMDELG 385

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  F  Q 
Sbjct: 386 DED-KVIVSRARKIQRFFSQP 405


>gi|309322341|ref|YP_003934192.1| ATP synthase CF1 beta chain [Cedrus deodara]
 gi|228017084|gb|ACP51906.1| ATP synthase CF1 beta subunit [Cedrus deodara]
 gi|307683267|dbj|BAJ19575.1| ATP synthase CF1 beta chain [Cedrus deodara]
          Length = 492

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+     +  + + ++ +G+ +   GQ I++  ++        V    
Sbjct: 19  GRIAQIIGPVLDVSFPPGNMPNIYNSLIVKGQGTA--GQEIQVTCEVQQLLGNHKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 77  MSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARVTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  +  D   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 432


>gi|224830522|gb|ACN66356.1| ATP synthase beta chain [Coscinium fenestratum]
          Length = 489

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGAPVDNLGPVD-SRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|112791410|gb|ABI21975.1| ATP synthase beta subunit [Erwinia psidii]
          Length = 421

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 176/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G + V       +       GR++N LG+PID    +G+ +
Sbjct: 22  LGGGVVRTIAMGSSDGLKRGLETVDLEHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEE 81

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 82  -RWAIHRSAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 140

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 141 NIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 200

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 201 TMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 258

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 259 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 318

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  ++   +  L+ R++E +DI  I G     +      V +   +  FL 
Sbjct: 319 QLDPLVVGQEHYEVARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLS 377

Query: 419 QS 420
           Q 
Sbjct: 378 QP 379


>gi|112791344|gb|ABI21942.1| ATP synthase beta subunit [Shigella dysenteriae]
          Length = 421

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  Q  N   + +V + +   IV    +G  + +  G  V        +       GR
Sbjct: 3   DALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNYQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVARARKIQRFLSQP 379


>gi|75333249|sp|Q9BA86|ATPB_PHODC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236722|gb|AAK14666.1| ATP synthase beta subunit [Phoenix dactylifera]
          Length = 498

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 434


>gi|728923|sp|P41168|ATPB_THIFE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154674|gb|AAA53127.1| F1F0-ATPase beta subunit [Acidithiobacillus ferrooxidans]
          Length = 468

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 111/404 (27%), Positives = 186/404 (46%), Gaps = 12/404 (2%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G+I  +      V     Q   + + +V    N     Q  ++   +     +G  E + 
Sbjct: 11  GHIVQVIGPVIDVAFSRGQVPEIMEAIVVDANNLTIEVQA-QLGDGVARGIAMGPSEGLK 69

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N LG+P+DG   +   D    I    P        
Sbjct: 70  RGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAAS 128

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+ L+    R+   +     + + VGER
Sbjct: 129 TEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGER 188

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            RE  +F  +     +  K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D
Sbjct: 189 TREGNDFYHEMTDSGVLDKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFID 248

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  
Sbjct: 249 NIFRYPLAGTEVSALLGRMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPA 306

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSL 376
           D+  DP   +  + LD  +VL+R +AE G YP +DPL S SR  D      +   +  S 
Sbjct: 307 DDLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSC 366

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              + R++E +DI  I G     +      V +   I  +L Q 
Sbjct: 367 QKTLQRYKELQDIIAILGMDELSEDD-KLLVSRARKIQRYLSQP 409


>gi|238753980|ref|ZP_04615339.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473]
 gi|238707732|gb|EEQ00091.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473]
          Length = 435

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G  S  + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGTASKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVTNLEHPIEVPVGKATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|112791374|gb|ABI21957.1| ATP synthase beta subunit [Brenneria salicis ATCC 15712]
          Length = 421

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 106/381 (27%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           D +  +      + +V  ++   +V    +G  + +  G  V + G    +       GR
Sbjct: 3   DALEVKNGAEKLVLEVEQQLGGGVVRCIAMGSSDGLRRGLDVANLGHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGDIGEEE-RWAIHRAAPTYEELSSSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EDD-KLVVSRARKIQRFLSQP 379


>gi|257852958|gb|ACV71490.1| ATP synthase beta subunit [Elvasia calophyllea]
          Length = 481

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 184/422 (43%), Gaps = 29/422 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      VT    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVTFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + L+   VL+R L+ +G YPPVDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLNATTVLSRGLSAKGIYPPVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426

Query: 421 PS 422
             
Sbjct: 427 LF 428


>gi|123325675|gb|ABM74462.1| ATP synthase beta subunit [Glycosmis sp. RJB GH06-111]
          Length = 463

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|163792320|ref|ZP_02186297.1| F1-ATP Synthase Beta Chain [alpha proteobacterium BAL199]
 gi|159182025|gb|EDP66534.1| F1-ATP Synthase Beta Chain [alpha proteobacterium BAL199]
          Length = 474

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/430 (25%), Positives = 184/430 (42%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQ-YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
             G I+ +      V    +    L       G N   L     +  + V    +   E 
Sbjct: 5   ATGKITQVIGAVIDVKFDGELPAILNALHTKIGDNLLVLEVAQHLGENTVRTIAMDSTEG 64

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
              G  V   G    +       GR++N +G P+D    + +  L   I    P  +++ 
Sbjct: 65  AVRGQSVSDTGGPITVPVGPETLGRILNVIGDPVDERPPV-ETKLRFPIHRPAPAYIDQS 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 124 TESEILITGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 183

Query: 197 ERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +   +        K+ +V    +E P  R    LT +T+AEYF  + 
Sbjct: 184 ERTREGNDLYHEMVESGVIVPDGPGSKAALVYGQMNEPPGARARVGLTGLTLAEYFRDEE 243

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT
Sbjct: 244 GQDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGALQERI--TTTKKGSIT 301

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      
Sbjct: 302 SVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGD 361

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           +   +   +  ++ ++   +DI  I G     +      V +   I  FL Q        
Sbjct: 362 EHYNIARRVQEVLQQYRSLQDIIAILGMDELSEED-RLTVARARKIQRFLSQP---FHVA 417

Query: 428 DVFQEITKKL 437
           ++F     KL
Sbjct: 418 EIFTGSPGKL 427


>gi|119350563|gb|ABL63232.1| AtpB [Trochiscia hystrix]
          Length = 392

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 5   VRAVAMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGPVETQE-TLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYDGAQNVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARRIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|7708472|emb|CAB89927.1| ATP synthase beta subunit [Lapageria rosea]
          Length = 494

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISS-ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I   I  V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GRIXQXIGPVLDAVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVSAVA 77

Query: 75  VGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGALLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|224830546|gb|ACN66368.1| ATP synthase beta chain [Limacia blumei]
          Length = 475

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|197302622|ref|ZP_03167676.1| hypothetical protein RUMLAC_01351 [Ruminococcus lactaris ATCC
           29176]
 gi|197298204|gb|EDY32750.1| hypothetical protein RUMLAC_01351 [Ruminococcus lactaris ATCC
           29176]
          Length = 467

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 187/407 (45%), Gaps = 15/407 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +  +      + +V   +  + V    +   E +
Sbjct: 4   GRIVQVMGPVVDVVFENGDLPFIKDALEVENNGKKCIMEVAQHLGNNEVRCLMLAASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ ID  + +        I  + P    +  
Sbjct: 64  CKDMEVTATGAGIQVPVGEQTLGRLFNVLGETIDNGEPITDSK-KWVIHREPPTFEEQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWTEMKASGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ +
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVAN 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 361 KVIAILQKYKELQDIIAILGMEELSDE--DKATVMRARKIQRFLSQP 405


>gi|189017694|gb|ACD71516.1| F1-ATPase alpha subunit [Burmannia oblonga]
          Length = 364

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 87/370 (23%), Positives = 152/370 (41%), Gaps = 22/370 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V          G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFARGGE---GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTLLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   + 
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VA 354

Query: 391 LIGGYRPGVD 400
               +   +D
Sbjct: 355 AFAQFGSDLD 364


>gi|7708646|emb|CAB89986.1| ATP synthase beta subunit [Sloanea berteroana]
          Length = 476

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V        +       G+
Sbjct: 37  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGQ 96

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 97  IFNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 155

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 156 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 215

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 216 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 275

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 276 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 333

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 334 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 393

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 394 ILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|289498371|gb|ADC99224.1| ATP synthase F1 alpha subunit [Aliivibrio fischeri]
          Length = 441

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 177/420 (42%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GIINIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVERFTNGEVTGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 410


>gi|241912874|gb|ACS72115.1| AtpB [Myrosmodes paludosa]
          Length = 489

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + ++   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFSPGKMPNIYNALII--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|149202397|ref|ZP_01879370.1| F0F1 ATP synthase subunit beta [Roseovarius sp. TM1035]
 gi|149144495|gb|EDM32526.1| F0F1 ATP synthase subunit beta [Roseovarius sp. TM1035]
          Length = 474

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 102/417 (24%), Positives = 185/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +         + +V   +  + V    +   E + 
Sbjct: 6   GKVTQVIGAVVDVQFDGDLPAILNALQTDNHGKKLILEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    +   +    I    P    +   
Sbjct: 66  RGQAVSDTGAPISVPVGNATLGRILNVIGEPVDEGAPIKATEYR-SIHQPAPEFSEQSTA 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  ++G+IT+
Sbjct: 245 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKQGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRLMDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|7708145|emb|CAB89976.1| ATP synthase beta subunit [Anagallis tenella]
          Length = 484

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   E ++ G  V   G    +       GR
Sbjct: 40  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDIGAALSVPVGGATLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I R   +  E++  
Sbjct: 219 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|21633413|gb|AAM52181.1| ATP synthase beta subunit [Jacquemontia ovalifolia subsp.
           sandwicensis]
          Length = 484

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 180/413 (43%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V QG+ ++   +V ++  +  V    +   + +
Sbjct: 18  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRQTNVTCEVQQLLGNNRVRTVAMSDTDGL 77

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LG+P+D    +    ++  I    P       
Sbjct: 78  MRGMDVIDMGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TKITSPIHRSAPAFTQLDT 136

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE--- 197
               F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G    
Sbjct: 137 KLSIFETGIEVVDLLAPHRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVFGGVGX 196

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 197 RTREGNDLYMEMQESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 256

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 257 EQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSIT 314

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        
Sbjct: 315 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGK 374

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|189017660|gb|ACD71499.1| F1-ATPase alpha subunit [Afrothismia hydra]
          Length = 387

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 85/386 (22%), Positives = 152/386 (39%), Gaps = 28/386 (7%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V I   G    I  GD V   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLEKDNVGIVVFGSDTAIKDGDPVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +  K    + R+ V +  +TG++ +D   P+  GQR  +      GK+ L 
Sbjct: 61  L-ASDQRRRVEVKATGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTALA 119

Query: 179 SMFARSDCF--------------------DKVIISLVGERGREVREFIEDYLGDNL-KKS 217
                +                          +   +G++   V + ++        + +
Sbjct: 120 IDTILNQKNIPPIAHPAEAALLGTSDTSPVYCVYVAIGQKRSTVAQLVQILPEARALEYT 179

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +++ AT+ +   L  +AP +   + EYF  K  + L+I D +++ A + R+++      P
Sbjct: 180 ILLAATASDPAPLLFLAPYSGCAMGEYFRDKSMHALIIFDDLSKQAVAYRQMSLLLRRPP 239

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I DG 
Sbjct: 240 GREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQ 299

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I     L   G  P ++   SVSR+   A S   K++  S    + ++ E   +     +
Sbjct: 300 ICSETELFYRGLRPAINVGLSVSRVGSAAQSRAMKQVCGSSKLELAQYRE---VAAFAQF 356

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSP 421
              +D      +++   + +  KQ  
Sbjct: 357 GSDLDAATQALLNRGARLTEVPKQPQ 382


>gi|21633443|gb|AAM52196.1| ATP synthase beta subunit [Tridynamia megalantha]
          Length = 490

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 182/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V      +  + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPYIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    + K + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGKPVDNLGPV-KTNXTSPIQRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
                  F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIXVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 198 RGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
            G   RE      +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGEXTREGNDLYMEMKESGVINEETIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|150388193|ref|YP_001318242.1| F0F1 ATP synthase subunit beta [Alkaliphilus metalliredigens QYMF]
 gi|172052470|sp|A6TK65|ATPB_ALKMQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|149948055|gb|ABR46583.1| ATP synthase F1, beta subunit [Alkaliphilus metalliredigens QYMF]
          Length = 464

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 190/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      +   S+ +  L   +  QG +     +V   I  D      +   + +
Sbjct: 7   GKLVQIIGAVVDIRFSSEEIPALLSAITIQGPDGLVTVEVAQHIGDDTARCVAMRSTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+ +D    + +  + + I  + P    ++ 
Sbjct: 67  VRGMEAIDTGAPITVPVGRETLGRIFNVLGEVVDEGKPV-EAKMHLPIHREAPSFEEQEA 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 126 ATEIFETGIKVVDLIAPYARGGKVGLFGGAGVGKTVLIMELINNIAKEHGGLSVFAGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   + +    + K+ +V    +E P  R    LT +T+AEYF  +   +VLL 
Sbjct: 186 RTREGNDLYHEMIESGVIDKTSLVYGQMNEPPGARMRVGLTGLTMAEYFRDQEGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D A    +  ++  
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSNSRILDPATVGQEHYEVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D      V +   +  FL Q 
Sbjct: 364 GVQEVLQRYKELQDIIAILGMDELSDED-KLTVARARRVQRFLSQP 408


>gi|258571577|ref|XP_002544592.1| ATP synthase F1, beta subunit [Uncinocarpus reesii 1704]
 gi|237904862|gb|EEP79263.1| ATP synthase F1, beta subunit [Uncinocarpus reesii 1704]
          Length = 521

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 188/445 (42%), Gaps = 21/445 (4%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  L+  ++       G I  +      V   S+ +   L       G     L     
Sbjct: 34  ALRALSARWASTETGNVGKIHQVIGAVVDVKFDSETLPPILNALETTNGGQKLVLEVAQH 93

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +   E +  G      G   +I       GR++N  G PID    + KG 
Sbjct: 94  LGESVVRTIAMDGTEGLVRGAKAIDTGAPIKIPVGPGTLGRIMNVTGDPIDERGPI-KGV 152

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 153 KMAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 212

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 213 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 272

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  +
Sbjct: 273 ALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGAM 332

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDP
Sbjct: 333 QERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDP 390

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      D  +  S +  ++  ++  +DI  I G     +      V +   
Sbjct: 391 LDSKSRMLDPRIVGDDHYQTASRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARK 449

Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437
           +  FL Q     +   VF  I  KL
Sbjct: 450 LQRFLSQP---FTVAHVFTGIEGKL 471


>gi|156622725|dbj|BAF76343.1| ATP synthase beta subunit [Chloranthus spicatus]
          Length = 487

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RFTVSRARKMERFLSQP 426


>gi|29829425|ref|NP_824059.1| F0F1 ATP synthase subunit alpha [Streptomyces avermitilis MA-4680]
 gi|81719753|sp|Q82J82|ATPA_STRAW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|29606532|dbj|BAC70594.1| putative F-type proton-transporting ATPase alpha chain
           [Streptomyces avermitilis MA-4680]
          Length = 529

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 90/447 (20%), Positives = 171/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYKPDAASREEVGTVTVAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAVVLGEFSGIEEGQPVHRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M+R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 SGRRALELQAPTVMDRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RSD----------CFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +              + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRTGDPKKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKSQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ+    + +ED    +  
Sbjct: 425 GQRMVELLKQAQYQPMPTEDQVVSVWA 451


>gi|14718105|gb|AAK72792.1| ATP synthase beta subunit [Laurelia novae-zelandiae]
          Length = 477

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 64  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 361 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 419


>gi|114571341|ref|YP_758021.1| F0F1 ATP synthase subunit beta [Maricaulis maris MCS10]
 gi|122315071|sp|Q0AKW0|ATPB_MARMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114341803|gb|ABI67083.1| ATP synthase F1 subcomplex beta subunit [Maricaulis maris MCS10]
          Length = 479

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/428 (24%), Positives = 183/428 (42%), Gaps = 25/428 (5%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I  IT     V        + + +     +     +V   +  + V    +  
Sbjct: 1   MSTSQGRIVQITGAVVDVEFDGTLPDILNALETTNDDKTLTLEVAQHLGENTVRTIAMDA 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G +V   G    +       GR+++  G+PID    +    +   I    P   
Sbjct: 61  TEGLQRGTVVTDTGGPIMVPVGPGTLGRIMSVTGQPIDEAGDV-PHTMKAPIHRPAPSFD 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIIS 193
            +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 EQATEAEVLPTGIKVVDLLCPYAKGGKIGLFGGAGVGKTVLIQELINNIAKLFGGYSVFA 179

Query: 194 LVGERGREVREFIEDYLGDNLKK-------------SVVVVATSDESPILRKMAPLTAVT 240
            VGER RE  +   + +   + K               +V    +E P  R    L+ + 
Sbjct: 180 GVGERTREGNDLYWEMIESGVNKDPKEHDGSTEGSRCALVFGQMNEPPGARARVALSGLA 239

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  
Sbjct: 240 QAEYFRDEEGKDVLFFVDNIFRFTQAGSELSALLGRIPSAVGYQPTLATDMGALQERI-- 297

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +   KG+IT+V +V V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR
Sbjct: 298 TSTTKGSITSVQAVYVPADDMTDPAPATTFAHLDATTVLNRAISEKGIYPAVDPLDSTSR 357

Query: 360 LADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           + +     +E       +  ++ R++  +DI  I G     +      V +   +  FL 
Sbjct: 358 ILEPRIVGEEHYGTARRVQEILQRYKALQDIIAILGMDELSEED-KLTVARARKVERFLS 416

Query: 419 QSPSDLSS 426
           Q P D++ 
Sbjct: 417 Q-PFDVAE 423


>gi|1168579|sp|P42467|ATPB_PEPNI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 427

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/363 (28%), Positives = 180/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  +IV    +   + +  G +V        +       GR++N +G PID    +   +
Sbjct: 57  LGGNIVRAIAMSSTDGLMRGMVVTDQESPITVPVGDATLGRLMNVVGDPIDEAGEV-PSE 115

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + +   ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R
Sbjct: 116 TRWPIHRSAPTYVQQNPSKEILETGIKVVDLLCPYVKGGKIGLFGGAGVGKTVLIQELIR 175

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +  ++     + + VGER RE ++ + +      + K+ +V    +E P  R    LT +
Sbjct: 176 NIAYEHGGYSVFAGVGERTREGKDLLVEMRESGVIDKTSLVFGQMNEPPGARMRIALTGL 235

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI 
Sbjct: 236 TVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGTMQERI- 294

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V +V V  D+  DP   +  + LD   VL RS++E+G YP VDPLAS S
Sbjct: 295 -TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLERSISEKGIYPAVDPLASTS 353

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   +  ++  + E +DI  I G     D      V +   I  FL
Sbjct: 354 RILDPRIVGEEHYEIARDVQEVLQEYRELQDIISILGMDELSDEE-KLTVARARRIERFL 412

Query: 418 KQS 420
            QS
Sbjct: 413 SQS 415


>gi|320546479|ref|ZP_08040794.1| ATP synthase F1 sector beta subunit [Streptococcus equinus ATCC
           9812]
 gi|320448864|gb|EFW89592.1| ATP synthase F1 sector beta subunit [Streptococcus equinus ATCC
           9812]
          Length = 468

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 114/413 (27%), Positives = 194/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLDI----VYICP 74
           +  G I+ +      V   +  +   + + ++       +   V+ + L++    V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFAAGDKLPEINNALIVYKNGDKSQKIVLEVALELGDGLVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  VF  GR   +       GRV N LG  ID D+   +      I  K P
Sbjct: 61  MESTDGLTRGLEVFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAEDAPRESIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 AFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQ 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYEVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVERARRIQFFLSQN 410


>gi|254283668|ref|ZP_04958636.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B]
 gi|219679871|gb|EED36220.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B]
          Length = 461

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 113/407 (27%), Positives = 186/407 (45%), Gaps = 19/407 (4%)

Query: 28  SITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDL 86
            I      V    + V  + D +   GK+     Q  ++   IV    +G  E IS G  
Sbjct: 3   QIIGAVIDVEFPRESVPQVYDALTISGKDLTLEVQ-QQLGDGIVRTIAMGSSEGISRGLE 61

Query: 87  VFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V + G    +       GR+++ LG+PID    +G+ +    I    P        E+  
Sbjct: 62  VENTGAPVSVPVGVETLGRIMDVLGRPIDERGDIGEKE-RASIHRDAPAYDELAASEELL 120

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202
           +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + VGER RE 
Sbjct: 121 ETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREG 180

Query: 203 REFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
            +F  +               K  +V    +E P  R    LT +T+AE F  +G +VLL
Sbjct: 181 NDFYYEMQESGVVDIENPSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 240

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V 
Sbjct: 241 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVY 298

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D      +  ++ 
Sbjct: 299 VPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLVIGNEHYEVA 358

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RGVQSVLQRYKELKDIIAILGMDELSEED-KMTVARARKIERFLSQP 404


>gi|124361718|gb|ABN09301.1| ATP synthase beta subunit [Diospyros pentamera]
          Length = 457

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V + G    +       GR+ N LG+P+D    +        I    P  
Sbjct: 61  ATDGLTRGMEVINTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTRSPIHRSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 414


>gi|7708644|emb|CAB89999.1| ATP synthase beta subunit [Sedum nudum]
          Length = 457

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 20  KGRDITGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTGAPLSVPVGGVTLGR 79

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 80  IFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 138

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 139 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 198

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 199 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 258

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 259 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 316

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 317 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIA 376

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  F  Q 
Sbjct: 377 ILGLDELSEED-RLTVARARKIERFFSQP 404


>gi|7708254|emb|CAB90050.1| ATP synthase beta subunit [Celastrus orbiculatus]
          Length = 484

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 11  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTSGHTINWIWEVQKLLGNNQVRAVAMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 71  ATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 XGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|301168587|emb|CBW28177.1| ATP synthase beta chain [Bacteriovorax marinus SJ]
          Length = 479

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 114/411 (27%), Positives = 195/411 (47%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           GYI  +      V   S  +        L + V+ + KN+  +     +  ++V    + 
Sbjct: 13  GYIKQVMGPVVDVEFPSGKLPSIYNALTLTNKVISEEKNNLVVEVAQHLGDNVVRCIAMD 72

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G+  +        GR+IN  G+PID   S+G  + S +I    P  
Sbjct: 73  ATEGLARGLEVVDTGKAIQAPVGKEVLGRIINVTGQPIDERGSIGNKE-SSDIHRDAPTF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++   ++ F TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 132 EDQSTTKEPFFTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIATQHGGFSVF 191

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250
           + VGER RE R+  ++      + K+ +V    +E P  R    LT +T+AEYF   +  
Sbjct: 192 AGVGERTREGRDLYDEMSESGVIDKTALVYGQMNEPPGARARVALTGLTVAEYFRDVEKQ 251

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  + ERI  +  + G+IT++
Sbjct: 252 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGAMQERI--TSTKDGSITSI 309

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D++ DP   +  + LD    L+R++AE G YP VDPL S S +       DE 
Sbjct: 310 QAVYVPADDYTDPAPATTFAHLDATTELSRAIAEIGIYPAVDPLTSSSTILSAEVLGDEH 369

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                ++  ++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 370 YNTARAVQEILQRYKELQDIIAILGMDELSEED-KLVVARARKVQKFLSQP 419


>gi|209965526|ref|YP_002298441.1| F0F1 ATP synthase subunit beta [Rhodospirillum centenum SW]
 gi|209958992|gb|ACI99628.1| ATP synthase F1, beta subunit [Rhodospirillum centenum SW]
          Length = 484

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 183/417 (43%), Gaps = 22/417 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I+ +      V        + + +    +    + +V   +  + V    +   + 
Sbjct: 11  TAGRITQVLGAVVDVQFDGDLPPILNALRTTNEGKPLVLEVAQHLGENTVRCIAMDTTDG 70

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR++N  G+PID    + K + +  I    P  + + 
Sbjct: 71  LTRGQDVVDTGAPISMPVGPATLGRILNVTGEPIDERGPV-KAEKTYPIHRSAPEFIEQS 129

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+VID+  P   G +IG+F G+G+GK+  +     +         + + VG
Sbjct: 130 TEAQILVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVTIQELINNIAKAHGGVSVFAGVG 189

Query: 197 ERGREVREFIEDYLGDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
           ER RE  +   + +   +            K  +V    +E P  R    L+ +TIAEYF
Sbjct: 190 ERTREGNDLYHEMIDSGVIKLNESGDTAGSKVALVYGQMNEPPGARARVGLSGLTIAEYF 249

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +K
Sbjct: 250 RDEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTKK 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VLNR++AE+  +P VDPL S SR  D  
Sbjct: 308 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAIAEQAIFPAVDPLDSTSRALDPR 367

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  K+   +  ++ +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 368 IVGEEHYKVARDVQKVLQQYKSLQDIIAILGMDELSEED-KLIVARARKIQRFLSQP 423


>gi|260845697|ref|YP_003223475.1| translocator EscN [Escherichia coli O103:H2 str. 12009]
 gi|57434457|emb|CAI43874.1| EscN protein [Escherichia coli]
 gi|257760844|dbj|BAI32341.1| translocator EscN [Escherichia coli O103:H2 str. 12009]
          Length = 446

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 155/409 (37%), Positives = 226/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I++I               +G F   +   S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKITNIGGTIIKARL--PKARIGAFYRIE--PSQRLAEVIAIDEDEVFLLPFEHISG 88

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P+  + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGDEFKIRVGDELLGRLVDGIGRPMGSNITAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAE+F  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEFFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+     +++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+     I  F++QS  D+SS +
Sbjct: 387 IATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFIQQSTKDISSYE 435


>gi|21633295|gb|AAM52122.1| ATP synthase beta subunit [Argyreia nervosa]
          Length = 487

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 18  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 77

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 78  DGLMRGMEVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRFAPAFIQ 136

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 137 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 196

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 197 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 256

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 257 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 314

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 315 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 374

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|73670551|ref|YP_306566.1| F0F1 ATP synthase subunit alpha [Methanosarcina barkeri str.
           Fusaro]
 gi|72397713|gb|AAZ71986.1| H(+)-transporting ATP synthase, subunit alpha [Methanosarcina
           barkeri str. Fusaro]
          Length = 571

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/427 (25%), Positives = 177/427 (41%), Gaps = 15/427 (3%)

Query: 3   KNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           K    + Q  E  +  L   + G I ++++    V+ L   V   + +   G   D  G 
Sbjct: 12  KVFTEIHQARESVTPTLTPKEVGRILTVSTGIANVSGL-PTVGFDELIKFPG---DLFGI 67

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              ++   +    +G    +  GD V    R           GRVI+ LG+P+D    + 
Sbjct: 68  AFNVDEKEIGTVLLGEYSHLHAGDQVERTQRVMDVAVGEELLGRVIDPLGRPLDNKGPIV 127

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-- 178
                + I    P  M+R  V    +TG++VID   P+  GQR  +      GK+ +   
Sbjct: 128 SSK-RLPIERPSPAIMDRAPVTVPLQTGVKVIDALIPIGRGQRELILGDRQTGKTAIAID 186

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
           ++  + +     +   +G+R   V   + +         ++VVV   ++   L  +AP  
Sbjct: 187 TILNQRNFNVLCVYCAIGQRASAVARAVANLRERGAMDYTIVVVTEGNDPSGLIYIAPYA 246

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAEYF   G +VL++ D +T  A + RE++      P    YP  +F    RLLER 
Sbjct: 247 ATSIAEYFMEAGRDVLIVYDDLTNHARAYRELSLLLRRPPGREAYPGDIFYIHSRLLERS 306

Query: 298 GPS--EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                E   G++TA+  +  +  N +  I  ++ SI DG I L+ SL E G  P VD   
Sbjct: 307 THLLKELGGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGK 366

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  KA  A  + +   +     +FEE         +   +D    K +     I  
Sbjct: 367 SVSRVGGKAQLAAYRAVAGDIKLAYSQFEELE---AFTRFGARLDENTRKLIEHGRRIRA 423

Query: 416 FLKQSPS 422
            LKQ  +
Sbjct: 424 LLKQPQN 430


>gi|254779683|ref|YP_003057789.1| F0F1 ATP synthase subunit beta [Helicobacter pylori B38]
 gi|254001595|emb|CAX29662.1| ATP synthase F1, subunit beta (ATPase subunit beta) (ATP synthase
           F1 sector subunit beta) [Helicobacter pylori B38]
          Length = 469

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 410


>gi|212538521|ref|XP_002149416.1| ATP synthase F1, beta subunit, putative [Penicillium marneffei ATCC
           18224]
 gi|210069158|gb|EEA23249.1| ATP synthase F1, beta subunit, putative [Penicillium marneffei ATCC
           18224]
          Length = 519

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 115/449 (25%), Positives = 190/449 (42%), Gaps = 24/449 (5%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQ 61
             L  L+        NLV   G I  +      V   ++ +  + + +  +      + +
Sbjct: 31  NALPALSARFASTDANLV---GKIHQVIGAVVDVKFDTESLPPILNALETENNGQKLVLE 87

Query: 62  V-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
           V   +   +V    +   E +S G      G    I       GR++N  G PID    +
Sbjct: 88  VAQHLGESVVRTIAMDGTEGLSRGAPCKDTGSPISIPVGPGTLGRIMNVTGDPIDERGPI 147

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                +  I ++ P    +    +   TGI+V+D+  P   G +IG+F G+G+GK+  + 
Sbjct: 148 KATKFA-PIHAEPPSFAEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQ 206

Query: 180 MFARSDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPIL 230
               +        S+   VGER RE  +   +         +   K  +V    +E P  
Sbjct: 207 ELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETGVIQLEGESKVALVFGQMNEPPGA 266

Query: 231 RKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R    LT +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  +
Sbjct: 267 RARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVD 326

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +  + ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP
Sbjct: 327 MGIMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYP 384

Query: 350 PVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
            VDPL S SR+ D      D     + +  ++  ++  +DI  I G     +      V 
Sbjct: 385 AVDPLDSKSRMLDPRVVGEDHYHTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVE 443

Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +   +  FL Q     +   VF  I  KL
Sbjct: 444 RARKLQRFLSQP---FTVAQVFTGIEGKL 469


>gi|34500024|gb|AAQ73594.1| ATP synthase beta subunit [Bisgaard Taxon 14]
          Length = 445

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +G N   L    ++   +V    +G  +
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDSVPKVYDALKVEGDNGLTLEVQQQLGGGVVRCIAMGSXD 60

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V   G    +       GR++N LG+PID    +G+ +    I  + P    +
Sbjct: 61  GLKRNLKVDDLGHPISVPVGVKTLGRIMNVLGEPIDELGPIGEEE-RWSIHRERPSYEEQ 119

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P     ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 120 SNSTELLETGIKVIDLVCPFAKRGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 179

Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           GER RE  +F  +    N+   V +V      P   ++   T +TIAE F  +G +VL  
Sbjct: 180 GERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVRTGLTIAEKFRDEGRDVLFF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V V
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD  +VL+R +A  G YP VDP  S SR  D      +  ++  
Sbjct: 298 PADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPFDSTSRQFDPLVVGKEHYEVAR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + R+++ +DI  I G     +      V +   I  FL Q 
Sbjct: 358 GVQSTLQRYKDLKDIIAILGMDELSEED-KLVVARARKIERFLSQP 402


>gi|285019666|ref|YP_003377377.1| ATP synthase subunit beta [Xanthomonas albilineans GPE PC73]
 gi|283474884|emb|CBA17383.1| probable atp synthase , beta subunit protein [Xanthomonas
           albilineans]
          Length = 468

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V    +    + D +  +G       Q  ++   +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFARADVPKIYDALKVEGTAITLEVQ-QQLGDGVVRTIALGSTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +    +  + GR   +   A   GR+++ LG+PID    +   D   EI    P   ++
Sbjct: 60  GLKRNLVATNTGRAIAVPVGAGTLGRIMDVLGRPIDEAGEVQATD-HWEIHRAAPTYEDQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSATELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPNVIGH 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +   + +++E +DI  I G     +    +AV +   I  F  Q 
Sbjct: 357 EHYDTARRVQSTLQKYKELKDIIAILGMDELSEED-KQAVSRARKIERFFSQP 408


>gi|11467384|ref|NP_043241.1| ATP synthase CF1 beta subunit [Cyanophora paradoxa]
 gi|1352028|sp|P48081|ATPB_CYAPA RecName: Full=ATP synthase subunit beta, cyanelle; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1016185|gb|AAA81272.1| beta subunit of the F1 portion of ATP synthase [Cyanophora
           paradoxa]
          Length = 485

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 189/421 (44%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
              GY++ +      V+    Q   + + +  +GKN          +V ++  D  V   
Sbjct: 8   TNTGYVTQVIGPVLDVSFPNGQLPKIYNAITVKGKNEAGQDITVTCEVQQLLGDNQVRAV 67

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + I  G  V   G    +       GR+ N LG+P+D   ++   D ++ I    
Sbjct: 68  SMSTTDGILRGMEVTDSGAAISVPVGTPTLGRIFNVLGEPVDELGAVV-CDSTLPIHRPS 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P     +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 127 PAFTQLETKSSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++     +         K  +V    +E P  R    LTA+T+
Sbjct: 187 SVFGGVGERTREGNDLYQEMKESKVIDENNLPASKVALVYGQMNEPPGARMRVALTALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 247 AEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              KG+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +
Sbjct: 305 STTKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  +        +  ++ R++E +DI  I G     +     AV +   +  FL Q
Sbjct: 365 LQPGIVGEKHYACAQRVKGILQRYKELQDIISILGLDELSEDD-RLAVARARRVERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|261366298|ref|ZP_05979181.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
 gi|282571896|gb|EFB77431.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176]
          Length = 465

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 113/406 (27%), Positives = 182/406 (44%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G I+ +      V      +  + + +V +      + +V R I    V    +  GE +
Sbjct: 5   GVIAQVLGPVVDVQFAEGSLPQINEELVVEKDGEHRVMEVAREIGHGAVRCILLSPGEGL 64

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V   G            GR+ N LG+PID    +   +    I    P    +  
Sbjct: 65  GRGDEVIATGHTIETPVGEATLGRMFNVLGEPIDEKGPVETPE-KWSIHRDPPAFDKQSP 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 124 TTEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 183

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R    LT +T+AEYF  +   NVLL 
Sbjct: 184 RTREGNDLWREMGESGVLSKTALVFGQMNEPPGARMRVALTGLTMAEYFRDRQKQNVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G IT+V +V V
Sbjct: 244 IDNIFRYVQAGSEVSALMGRMPSAVGYQPTLADEVGALQERI--TSTKDGAITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  S LD   VL+R + E+G YP VDPL S SR+ +         ++  
Sbjct: 302 PADDLTDPAPATTFSHLDATTVLSRKIVEQGIYPAVDPLESTSRILEPDIVGRRHYEIAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               L+ R+ + +DI  I G     +    + V +   +  F  Q 
Sbjct: 362 GAQELLQRYRDLQDIIAILGMEELSEDD-RRTVARARRMQQFFSQP 406


>gi|224830584|gb|ACN66387.1| ATP synthase beta chain [Strychnopsis thouarsii]
          Length = 489

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSSIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 428


>gi|4995850|emb|CAB44293.1| H(+)-transporting ATP synthase [Triplochiton zambesiacus]
          Length = 440

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 2   GQQXNVXXEVQQLLGNNRVRAVAMXATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLG 61

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 62  EPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 120

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 121 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVAL 180

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 181 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 240

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 241 AVGYQPTLSTEMGSLQERI--TSTXEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 298

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADE-KKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +E  +    +   + R++E +DI  I G   
Sbjct: 299 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEXYETAQRVKQTLQRYKELQDIIAILGLDE 358

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 359 LSEED-RLTVARARKIERFLSQP 380


>gi|291546602|emb|CBL19710.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus sp. SR1/5]
          Length = 465

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 191/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V    Q   + D +  +      + +V   +  +IV    +G  E +
Sbjct: 4   GKIVQVMGPVVDVVFEDGQLPDIKDALEVENNGKRCVMEVSQHLGNNIVRCIMLGASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG  +DG DSL  G+    I    P    ++ 
Sbjct: 64  QRDREVTATGSGIKVPVGDKTLGRLFNVLGDTVDGGDSLD-GEEHWVIHRDPPSFEEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    ++   +    S+   VGE
Sbjct: 123 AVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGNDLWTEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHRDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     ++G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKEGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADIVGEEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 361 RVQEILQKYKELQDIIAILGMEELSEED-KQTVFRARKIQKFLSQP 405


>gi|15723922|gb|AAL06369.1|AF311901_21 EscN [Citrobacter rodentium]
          Length = 446

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 155/406 (38%), Positives = 224/406 (55%), Gaps = 7/406 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I++I               +G F  ++ +    L +VI IN D V++ P      +  
Sbjct: 36  GKITNIGGTIIKARL--PNARIGAF--YKIEPGQRLAEVIAINGDEVFLLPFEHVSGMYC 91

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  + + G  F+I       GR+++ +G+P+  + +         + ++ P  + RQ ++
Sbjct: 92  GQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNIATLYLPFKRSLYAEPPDPLLRQVID 151

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           + F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERGREV
Sbjct: 152 QPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERGREV 211

Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
            EF+       L K V+VV TSD   + R  A  TA TIAEYF  +G NVL ++DS+TR+
Sbjct: 212 NEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLFMMDSVTRY 271

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322
           A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN ND
Sbjct: 272 ARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDNVND 329

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           PI D VRSILDGHIVL R LAEE  +P +D   S SR+      ++  +  +    LI  
Sbjct: 330 PIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKLIAT 389

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           ++    +  IG Y  G D   DKA+     I   L+QS  D+SS +
Sbjct: 390 YKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSSLQQSTKDISSYE 435


>gi|154424941|emb|CAL18573.1| ATP synthase alpha subunit [Streptococcus gordonii]
          Length = 366

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 161/367 (43%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +V +    D+ G    +  + V I  +G   +I  GD +   G+   +      
Sbjct: 7   AMSGELLVFEN---DSYGMAQNLESNDVGIIILGDFTDIREGDTIRRTGKIMEVPVGEAL 63

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 64  IGRVVDPLGRPVDGLGDI-ATDKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 122

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+T+      +        I   +G++   VR  +E          ++
Sbjct: 123 QRELIIGDRQTGKTTIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTI 182

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 183 VVTASASQPSPLLYLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 242

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 243 REAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQI 302

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 303 FLSDSLFNAGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFG 359

Query: 397 PGVDLIL 403
             +D   
Sbjct: 360 SDLDAAT 366


>gi|121607476|ref|YP_995283.1| F0F1 ATP synthase subunit beta [Verminephrobacter eiseniae EF01-2]
 gi|190358710|sp|A1WF58|ATPB_VEREI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|121552116|gb|ABM56265.1| ATP synthase F1, beta subunit [Verminephrobacter eiseniae EF01-2]
          Length = 471

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 18/414 (4%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
            VQG  +  I +V        +   + D +  +G       Q  ++   +V    +G  +
Sbjct: 6   AVQGKIVQCIGAVVDVEFPRDKMPKIYDALKFEGSALTLEVQ-QQLGDGVVRTIALGSSD 64

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G +V +      +       GR+++ LG PID    + +  L+  I  K P     
Sbjct: 65  GLRRGLIVTNTQAPITVPVGKATLGRIMDVLGAPIDERGPVDQT-LTASIHRKAPAYDEL 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              +   +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 124 SPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 183

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +TIAE F  
Sbjct: 184 GERTREGNDFYHEMADSGVVNLEKLENSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRD 243

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+I
Sbjct: 244 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSI 301

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 302 TSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVG 361

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++   + R++E RDI  I G    +      AV +   I  FL Q 
Sbjct: 362 QEHYNVARAVQGTLQRYKELRDIIAILGMDE-LAPEDKLAVARARKIQRFLSQP 414


>gi|332702975|ref|ZP_08423063.1| ATPase, FliI/YscN family [Desulfovibrio africanus str. Walvis Bay]
 gi|332553124|gb|EGJ50168.1| ATPase, FliI/YscN family [Desulfovibrio africanus str. Walvis Bay]
          Length = 436

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 150/424 (35%), Positives = 231/424 (54%), Gaps = 10/424 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIG 78
           V   G I+ +  +      +   V     +V      ++L  +++          P G  
Sbjct: 16  VRNFGKITKVVGLVAEGRGIKAPVGAVCHLVPHEPGGESLAAEIVGFRDGACLFMPYGDM 75

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G L+ +            + GR ++A G P+DG D+    +    + ++ P  + 
Sbjct: 76  RGVRPGSLIQNSSNPPHFPVGFGFLGRALDAFGAPLDGRDA-PAPEAYYPLHTEPPNPLT 134

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R R+ +    G+R ++    L  GQR+G+ AGSG+GKST++ M AR    D  +I+LVGE
Sbjct: 135 RPRINEPLDVGVRAVNALLTLGKGQRVGIMAGSGVGKSTVMGMMARYTKADVNVIALVGE 194

Query: 198 RGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREV EF+  D   + +K+SV+VVATSD SP++R  A   A  +AE+F  +G +VLL++
Sbjct: 195 RGREVVEFMERDLGPEGMKRSVLVVATSDTSPLVRMRAAYAATAMAEFFRDQGKDVLLMM 254

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TRF  + RE+   +GE P   G+  SVF+ LP+LLER G S K  G+IT + +VLVD
Sbjct: 255 DSVTRFCMAGREVGLAAGEPPTRGGFTPSVFAHLPKLLERAGKSAK--GSITGIYTVLVD 312

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           GD+  +P+AD+ RSILDGHIVL R LA+ G YP +D L SVSRL     S + +    +L
Sbjct: 313 GDDFTEPVADATRSILDGHIVLTRELADAGHYPSIDVLKSVSRLRSDITSPEAQVAGRTL 372

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD----LSSEDVFQE 432
              +  F+   D+  IG Y  G +  +DKA+  +  I DFL+Q   +     +S    Q+
Sbjct: 373 IRHMATFKRVEDMVNIGAYAQGSNPEIDKALKMIGPINDFLRQGVDENADLPTSFKAMQD 432

Query: 433 ITKK 436
           + ++
Sbjct: 433 LARR 436


>gi|241912860|gb|ACS72108.1| AtpB [Goodyera pubescens]
          Length = 489

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V Q  + D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIQ--SRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|20269436|gb|AAM17945.1| ATP synthase beta subunit [Schima superba]
          Length = 479

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMXVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVGERGREVR---EFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G       +   +               K  VV    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGEXTXEGXDLYMEXXESGVINEQNIAESKVAVVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+  RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNXFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDX-LXVARARKIERFLSQP 434


>gi|68139369|gb|AAY86049.1| ATP synthase beta subunit [Siparuna brasiliensis]
          Length = 456

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIS 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   +  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKMERFLSQP 408


>gi|66826095|ref|XP_646402.1| ATP synthase beta chain, mitochondrial [Dictyostelium discoideum
           AX4]
 gi|74997414|sp|Q55CS9|ATPB_DICDI RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|60474371|gb|EAL72308.1| ATP synthase beta chain, mitochondrial [Dictyostelium discoideum
           AX4]
          Length = 651

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 18/374 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    + I + +  G LV + G    +       GR++N +G+PIDG   +   +
Sbjct: 153 LGDGIVRCVALDITDGLGRGALVLNTGSPLMVPVGQATLGRIMNVIGEPIDGCGPIPATE 212

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    PP  +        +TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 213 -KRPIWRAPPPFADLAPSASILETGIKVIDLLAPYSRGGKIGLFGGAGVGKTVLIQELIN 271

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKM 233
           +        S+   VGER RE  +   + +   +        K  +V    +E P  R  
Sbjct: 272 NIAKAHGGFSVFTGVGERTREGNDLYHEMVEAGVIKKEGPGSKVALVFGQMNEPPGARAR 331

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 332 VTLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGC 391

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  ++K  G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VD
Sbjct: 392 MQERIATTKK--GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPCVD 449

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S S + D      +  K+ + +  ++  ++  +DI  I G    +       V +  
Sbjct: 450 PLDSTSLMMDPNIIGVEHYKVATDVQKILQEYKSLQDIIAILGMD-DLSEDQKATVFRAR 508

Query: 412 IIYDFLKQSPSDLS 425
            I  FL Q P +++
Sbjct: 509 KIQRFLSQ-PFEVA 521


>gi|295400692|ref|ZP_06810669.1| ATP synthase F1, beta subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112618|ref|YP_003990934.1| ATP synthase F1 subunit beta [Geobacillus sp. Y4.1MC1]
 gi|294977273|gb|EFG52874.1| ATP synthase F1, beta subunit [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217719|gb|ADP76323.1| ATP synthase F1, beta subunit [Geobacillus sp. Y4.1MC1]
          Length = 473

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 170/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G    +       GRV N LG+PID    + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEITLGRVFNVLGEPIDLQGEIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +     +IT++ ++ V  D++ DP   +  S LD    L R LAE G YP VDPLA
Sbjct: 291 RITSTSTG--SITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +  ++   +   + R+ E +DI  I G     D      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYQVARKVQQTLQRYRELQDIIAILGMDELSDED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|118573528|sp|Q24MP1|ATPB_DESHY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 465

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 15/408 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV----CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           G I  I      V   S+ +          V + K    L     +  + V    +   +
Sbjct: 4   GKIVQIMGAVVDVEFASEALPEIYSAVKVTVPEQKIDLTLEVAQHLGNNTVRCVAMSSTD 63

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G    + G    +       GR+ N LGK ID  + +   D S  I    P  +++
Sbjct: 64  GLQRGMAALNTGAPITVPVGPATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + V
Sbjct: 123 DPSTVMLETGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGV 182

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVL 253
           GER RE  +   +      + K  +V    +E P  R    LT +T+AEYF   +  +VL
Sbjct: 183 GERTREGNDLWNEMRESGVIDKMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT+V ++
Sbjct: 243 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAI 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        +  K+
Sbjct: 301 YVPADDLTDPAPATAFAHLDATTVLNRAISEKGIYPAVDPLDSNSRILSPQIIGEEHYKV 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ +++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 ARDVQQILQKYKELQDIIAILGMDELSEDE-KLVVSRARRIERFLSQP 407


>gi|19033057|gb|AAL83513.1|AF408785_1 ATP synthase beta subunit [Nitellopsis obtusa]
          Length = 402

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|323715502|gb|ADY04819.1| ATP synthase beta subunit [Loasa vulcanica]
          Length = 483

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGTNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPHRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPALVTTFAHLDVTTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|238918891|ref|YP_002932405.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146]
 gi|84663099|gb|ABC60081.1| EsaN [Edwardsiella ictaluri 93-146]
 gi|238868459|gb|ACR68170.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146]
          Length = 438

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 153/402 (38%), Positives = 226/402 (56%), Gaps = 12/402 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + +I +           V LG+       +     +V+ I  D   + P      ++ 
Sbjct: 28  GRLLTIGATLLRAHL--PGVGLGEQCTLPDGSP---AEVVAIEGDQALLSPYQPPLGLAN 82

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G LV   G +  I  S    GRVI+ALG+P DG     +      + S  P  M R  ++
Sbjct: 83  GMLVTPLGAQACIGVSEALLGRVIDALGQPADGKPP-AQATQWRSLDSPPPDPMQRAPID 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
                G+R ID    +  GQR+G+F+ +G GKSTLL M A +   D VI++L+GERGREV
Sbjct: 142 TLLPMGVRAIDATLSVGVGQRLGIFSPAGCGKSTLLGMMATNSQADVVILALIGERGREV 201

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REF+ +    +   +SVV++ATSD   + R  A  TA  IAEYF  +G NVLL++DS+TR
Sbjct: 202 REFLEQIMSPELRARSVVILATSDRPALERIKAADTATVIAEYFRDRGHNVLLLVDSLTR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           +A +IREIA  +GE  V+ GYP S+++ LPRLLER GP+    G+ITA  +VLV+    +
Sbjct: 262 YARAIREIALAAGEPTVSGGYPPSLYARLPRLLERAGPAA--CGSITAFYTVLVEQK--S 317

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           DP+A+ VRS+LDGHIVL+R LAE   YP +D +AS+SR+  +  +   ++  + L HL+ 
Sbjct: 318 DPLAEEVRSLLDGHIVLSRRLAEASHYPAIDIMASISRVMSQIVTPQHRQAANRLRHLMA 377

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            ++E   +  +G YR G D   D+A+ +   I + L Q   +
Sbjct: 378 TWQEIALLVRVGEYRAGQDTDADEAIARREAIDNLLCQKTDE 419


>gi|157285061|gb|ABV31270.1| ATPase [Grimontia hollisae]
 gi|157285169|gb|ABV31324.1| ATPase [Grimontia hollisae]
 gi|157285177|gb|ABV31328.1| ATPase [Grimontia hollisae]
          Length = 441

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 97/418 (23%), Positives = 176/418 (42%), Gaps = 27/418 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+     G+ +   G   +     + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-AMQGEMIELPG---NRFALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  + RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPINAS-LTSPVEVIAPGVIARQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + +     I   +G++   +   +  
Sbjct: 116 AVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               D LK ++VVVA++ E+  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHDALKNTIVVVASASEAAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLRRPPGREAFPGDVFYLHSRLLERAARVNADYVEKFTNGEVTGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF++
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFEQ 408


>gi|317009744|gb|ADU80324.1| F0F1 ATP synthase subunit beta [Helicobacter pylori India7]
          Length = 469

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQVVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|317506177|ref|ZP_07963998.1| ATP synthase F1 [Segniliparus rugosus ATCC BAA-974]
 gi|316255522|gb|EFV14771.1| ATP synthase F1 [Segniliparus rugosus ATCC BAA-974]
          Length = 543

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 177/444 (39%), Gaps = 24/444 (5%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q    ++     +  G +   +     V+ L   V   + +   G     LG  + 
Sbjct: 13  SAIEQYVASFTPESAREEIGEVIDTSDGIAHVSGL-PSVMTNELLEFPGG---ILGVALN 68

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V +  +G  E I  G  V   G    +     + GRV+N LG+PIDG   +   +
Sbjct: 69  LEEDAVGVVILGDFESIEAGQQVKRTGDVLSVPVGDAFLGRVVNPLGQPIDGLGDI-ASE 127

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLL 178
            +  +  +    + RQ VE+   TGI  ID  T +  GQR  V      GK       +L
Sbjct: 128 SNRVLELQAATVLERQPVEESLATGITAIDAMTAIGRGQRQLVIGDRKTGKTAVCIDAIL 187

Query: 179 SMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232
           +  A  +  D     + I   VG++G  +               + +V A + +S   + 
Sbjct: 188 NQKANWETGDPTKQVRCIYVAVGQKGSTIAGVKAALDAAGAMEYTTIVAAPASDSAGFKW 247

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP T  +I +++   G +VL++ D +T+ A + R I+      P    YP  VF    R
Sbjct: 248 LAPYTGSSIGQHWMYAGKHVLIVFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFYLHSR 307

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER          G++T +  +    ++ +  I  +V SI DG + L   L  +G  P 
Sbjct: 308 LLERCAKLSDAMGGGSMTGLPIIETKANDVSAFIPTNVISITDGQVFLESDLFNKGVRPA 367

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A +   KK+  SL   + ++ E         +   +D      + + 
Sbjct: 368 INVGISVSRVGGAAQTKGLKKVSGSLRLELAQYRELE---AFAAFASDLDAASKAQLERG 424

Query: 411 PIIYDFLKQSP-SDLSSEDVFQEI 433
               + LKQ   S +  ED    I
Sbjct: 425 ARWVELLKQDQYSPVKVEDQIVSI 448


>gi|241912912|gb|ACS72134.1| AtpB [Spiranthes romanzoffiana]
          Length = 489

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/421 (26%), Positives = 183/421 (43%), Gaps = 29/421 (6%)

Query: 23  GGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
            G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V   
Sbjct: 12  FGRITQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    
Sbjct: 70  AMSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIKLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|157285085|gb|ABV31282.1| ATPase [Vibrio proteolyticus]
          Length = 441

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++RQ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRQSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNAEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|37720953|gb|AAN32479.1| ATP synthase beta subunit [Anticlea elegans]
          Length = 483

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DN+GQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 38  KGRDNVGQQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|12004147|gb|AAG43913.1|AF213782_1 ATP synthase beta subunit [Manilkara zapota]
          Length = 482

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 25/420 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   +   +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYTALVVKGRDTVDKPINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 81  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLHMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q   
Sbjct: 378 RIVGEEHYETAKEVKQTLQRYKELQDIIAILGLDELSEED-RLFVARARKIERFLSQPVF 436


>gi|21633279|gb|AAM52114.1| ATP synthase beta subunit [Lepistemon owariensis]
          Length = 490

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMDVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7708466|emb|CAB89920.1| ATP synthase beta subunit [Krameria ixine]
          Length = 462

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  + +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KARNTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGVTLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVDTSTTS-PIHRPAPDFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I R   +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLLFIDNIFRLVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|241912852|gb|ACS72104.1| AtpB [Gomphichis valida]
          Length = 489

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQKINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINTIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|89242554|gb|ABD64635.1| ATPase beta subunit [Stegolepis sp. Qiu 97132]
          Length = 436

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGDPVDNLGPVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|61196966|gb|AAX39468.1| ATP synthase beta subunit [Nitellopsis obtusa]
          Length = 402

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|52630923|gb|AAU84925.1| putative flagellum-specific ATP synthase [Toxoptera citricida]
          Length = 451

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 167/453 (36%), Positives = 250/453 (55%), Gaps = 20/453 (4%)

Query: 1   MQKNLETLAQLA---EDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--- 52
           M+     L       E+   NL  +   GY+ SI      V  L     +G   + +   
Sbjct: 1   MKLKCSKLFDKIDYFENKINNLSDISIYGYVVSINGSILEVVGL--KAPIGSECIVERII 58

Query: 53  -GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRF----RISPSACWCGRV 105
            GK  + L +V++ N +   +  +     I  G  V    +       ++       GRV
Sbjct: 59  DGKVLNILSRVVKFNKEKTLLFSLEETYGILPGAKVFLKTFKNINFIKKVPLGMSLLGRV 118

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
           +N  G P+D   +L     ++ I  K    ++R+ ++K   TGI  I+    +  GQRIG
Sbjct: 119 LNGKGDPLDNLPNLDPQCFTI-IKKKYINPLHRRPIKKILDTGICAINGLLTIGRGQRIG 177

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATS 224
           +F+ +GIGKS LL M ++    D V+I L+GERGREVR+FI++ LG D L KSVV+ A +
Sbjct: 178 IFSSTGIGKSILLGMMSKYTEADVVVIGLIGERGREVRDFIDNILGSDGLLKSVVIAAPA 237

Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           D SP+L+  A L A +IAEYF  K  NVLLI+DS+TR+A + RE++ + GELPV+RGYP+
Sbjct: 238 DVSPLLQIEAALYATSIAEYFRDKNKNVLLIMDSLTRYAMAQREVSLSLGELPVSRGYPS 297

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           SVFS +P L+ER G  +  +G+ITA  +VL + +   DPI+   RSILDGHI+L+R  AE
Sbjct: 298 SVFSNIPLLVERSGNIDN-EGSITAFYTVLTEYEEEQDPISQICRSILDGHIILSRYYAE 356

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G YP +D  +S+SR+  +  S  +         LI  ++  +D+  IG Y  G D+ILD
Sbjct: 357 LGHYPAIDIESSISRVMPEIISQQQYLKACYFKKLIASYQRNKDLINIGAYIKGNDVILD 416

Query: 405 KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +A+ + P +  FL+Q PS+ S+  +  E   KL
Sbjct: 417 EAIQKWPNLEKFLQQKPSEKSNYLISCEKLNKL 449


>gi|19033055|gb|AAL83512.1|AF408784_1 ATP synthase beta subunit [Lychnothamnus barbatus]
 gi|61196964|gb|AAX39467.1| ATP synthase beta subunit [Lychnothamnus barbatus]
          Length = 402

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|222139893|ref|YP_002519961.1| ATP synthase CF1 beta chain [Ephedra equisetina]
 gi|220983562|dbj|BAH11329.1| ATP synthase CF1 beta chain [Ephedra equisetina]
          Length = 489

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 111/425 (26%), Positives = 186/425 (43%), Gaps = 24/425 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQG----KNSDNLGQVIRINLDI- 69
           S  +    G+I+ I      V+  L     + + ++ +G    K  +   +V ++  +  
Sbjct: 18  STKIQKNVGHITQIIGPVLDVSFPLGNLPNIYNSLIVKGQIGSKEINITCEVQQLLGNNT 77

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I
Sbjct: 78  VRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLGEPVDNLGPIDTS-TTFPI 136

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 137 HRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 196

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 197 HGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIIESKVALVYGQMNEPPGARMRVGLT 256

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 257 ALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQER 316

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 317 I--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 374

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +   ++   +   + R++E +DI  I G     +      V +   I  
Sbjct: 375 TSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIER 433

Query: 416 FLKQS 420
           FL Q 
Sbjct: 434 FLSQP 438


>gi|108563495|ref|YP_627811.1| F0F1 ATP synthase subunit beta [Helicobacter pylori HPAG1]
 gi|107837268|gb|ABF85137.1| ATP synthase F1, subunit beta [Helicobacter pylori HPAG1]
 gi|307637801|gb|ADN80251.1| ATP synthase beta chain [Helicobacter pylori 908]
 gi|325996399|gb|ADZ51804.1| ATP synthase beta chain [Helicobacter pylori 2018]
 gi|325997987|gb|ADZ50195.1| ATP synthase beta subunit [Helicobacter pylori 2017]
          Length = 469

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQIVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|114561|sp|P26532|ATPB_PYLLI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|14181|emb|CAA42899.1| beta subunit of ATPase [Pylaiella littoralis]
          Length = 481

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 112/416 (26%), Positives = 183/416 (43%), Gaps = 20/416 (4%)

Query: 21  VQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           +  GYI+ +   V   V        + + +  Q K    + +V ++  D  V    +   
Sbjct: 12  INNGYITQVIGPVIDAVFSSGILPKIYNALEVQSKEGPIICEVQQLLGDNRVRAIAMSAT 71

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D       G+ ++ I    P   +
Sbjct: 72  DGLQRGVTVIDTQAPIAVPVGKATLGRIFNVLGQPVDNLSD-SVGEDTLPIHRSAPAFTD 130

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
            +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 131 LETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 190

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 191 VGERTREGNDLYMEMKESGVINETNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 250

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G
Sbjct: 251 DINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTTQG 308

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 309 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLI 368

Query: 366 SAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D   K    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 VGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEED-RLVVDRARKIERFLSQP 423


>gi|28188335|gb|AAL92547.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 395

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|88797167|ref|ZP_01112757.1| ATP synthase subunit B [Reinekea sp. MED297]
 gi|88780036|gb|EAR11221.1| ATP synthase subunit B [Reinekea sp. MED297]
          Length = 466

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 184/414 (44%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I+ I      V      V  + D +           Q  ++   +V    +G  E
Sbjct: 1   MSSGRITQIIGAVVDVEFPRDSVPKVYDALKIDANGITLEVQ-QQLGDGVVRTIAMGTTE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G    +       GR++N LG+PID    +   + S+ I +  P    +
Sbjct: 60  GLKRGLDVSNTGEGIAVPVGTGTLGRIMNVLGEPIDERGEIQTDERSV-IHADAPSYAEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +   +     + + V
Sbjct: 119 AHSQEILETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMLELINNIATEHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +               K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYHEMSDAGVIQLEKLEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 239 EGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D     
Sbjct: 297 TSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAALGIYPAVDPLDSSSRQLDPQIIG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            D       +  ++ +++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 357 NDHYNTARGVQGVLQKYKELKDIIAILGMDELSDED-KQTVSRARKIERFLSQP 409


>gi|228016323|gb|ACP51157.1| ATP synthase CF1 beta subunit [Pinus taeda]
          Length = 492

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 192/443 (43%), Gaps = 34/443 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL 59
           M+KN   L       S  +    G I+ I      V+     +  + + +  +G+ +   
Sbjct: 1   MRKNPLVLG-----VSARVEKNVGRIAQIIGPVLDVSFPPGNMPNIYNSLTVKGQGTA-- 53

Query: 60  GQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GQ I++  ++        V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVDAG-ITSAIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|322385223|ref|ZP_08058870.1| ATP synthase F1 sector beta subunit [Streptococcus cristatus ATCC
           51100]
 gi|321270847|gb|EFX53760.1| ATP synthase F1 sector beta subunit [Streptococcus cristatus ATCC
           51100]
          Length = 468

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKITQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D           I  K P
Sbjct: 61  MESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFADDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQFFLSQN 410


>gi|269819628|gb|ACZ44926.1| F1-ATPase alpha subunit [Burmannia flava]
          Length = 356

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 86/360 (23%), Positives = 151/360 (41%), Gaps = 19/360 (5%)

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK 121
           + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L  
Sbjct: 1   LNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGIPIDGRGALSD 60

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            +    +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +    
Sbjct: 61  HE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDT 119

Query: 182 ARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPI 229
             +                 +   +G++   V + ++     N  + S++V AT+ +   
Sbjct: 120 LLNQKQINSRSTSESETLYCVYVAIGQKRSTVAQLVKILSEANALEYSILVAATASDPAP 179

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF  
Sbjct: 180 LQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYL 239

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G 
Sbjct: 240 HSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGI 299

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K++  S    + ++ E   +     +   +D      +
Sbjct: 300 RPAINVGLSVSRVGSAAQLRAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALL 356


>gi|157285147|gb|ABV31313.1| ATPase [Vibrio pomeroyi]
          Length = 430

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEVYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|157285055|gb|ABV31267.1| ATPase [Vibrio splendidus]
 gi|289498327|gb|ADC99202.1| ATP synthase F1 alpha subunit [Vibrio splendidus]
 gi|289498335|gb|ADC99206.1| ATP synthase F1 alpha subunit [Vibrio splendidus]
 gi|289498359|gb|ADC99218.1| ATP synthase F1 alpha subunit [Vibrio splendidus]
 gi|289498377|gb|ADC99227.1| ATP synthase F1 alpha subunit [Vibrio splendidus]
          Length = 423

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 98/420 (23%), Positives = 177/420 (42%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|119368194|dbj|BAF40440.1| ATP synthase beta subunit [Garcinia subelliptica]
          Length = 489

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     D   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQEIDVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDDLGPVD-ARTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|158524736|gb|ABW71262.1| mitochondrial ATP synthase beta subunit [Sagitta setosa]
          Length = 428

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/401 (26%), Positives = 183/401 (45%), Gaps = 21/401 (5%)

Query: 51  HQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINA 108
            +G+++  + +V   +  ++V    +   E +  G       G   I       GR+IN 
Sbjct: 11  VEGRDTKLILEVAQHLGENVVRTIAMDGTEGLVRGQPCKDMGGPITIPVGPATLGRIINV 70

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+PID    + + D  + I  + P        ++  +TGI+V+D+  P   G +IG+F 
Sbjct: 71  IGEPIDERGPI-ETDKFLPIHQEAPEFTEMSTEQEILETGIKVVDLLAPYAKGGKIGLFG 129

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSV 218
           G+G+GK+ L+     +         + + VGER RE  +   + +        D   K  
Sbjct: 130 GAGVGKTVLIMELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVISLTDKTSKVA 189

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P
Sbjct: 190 LVYGQMNEPPGARARVCLTGLTVAEYFRDYEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 249

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   V
Sbjct: 250 SAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTV 307

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R +AE G YP VDPL S SR+ D      +       +  ++  ++  +DI  I G  
Sbjct: 308 LSRGIAELGIYPAVDPLDSSSRILDPNIVGHEHYACARGVQKILQDYKSLQDIIAILGMD 367

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              +      V +   I  FL Q        +VF     KL
Sbjct: 368 ELSEED-KLTVSRARKIQRFLSQP---FQVAEVFTGHAGKL 404


>gi|148927462|ref|ZP_01810965.1| ATP synthase F1, beta subunit [candidate division TM7 genomosp.
           GTL1]
 gi|147887186|gb|EDK72653.1| ATP synthase F1, beta subunit [candidate division TM7 genomosp.
           GTL1]
          Length = 460

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 117/410 (28%), Positives = 194/410 (47%), Gaps = 17/410 (4%)

Query: 22  QGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           Q G ++ +  V   V     Q   + D +    KNS  L  V+     +N   V    + 
Sbjct: 6   QMGKVTQVIGVVVDVEFSKEQLPAIFDALEVDRKNSGVL--VLEVAQHLNETTVRAIAMA 63

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  GD +   G    +       GR+ N +G+PIDG  ++ K      I  + P  
Sbjct: 64  NTDGLRRGDEMRATGGPITVPVGKETQGRMFNVVGEPIDGK-AISKNAHVAPIHKEPPAF 122

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P+  G ++G+F G+G+GK+ L+     +         + 
Sbjct: 123 TDQSGKTEILETGIKVIDLIAPIAKGGKVGLFGGAGVGKTVLIQELISNIAKFHSGSSVF 182

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +  E+     +  K+ +V    +E P  R    L+ + +AE F  +G +
Sbjct: 183 AGVGERTREGNDLYEEMXASGVLDKTSLVFGQMNEPPGARLRVALSGLAMAEAFRDEGKD 242

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G LP A GY  ++  E+  L ERI  +  +KG++T+V 
Sbjct: 243 VLLFIDNIFRFTQAGSEVSALLGRLPSAVGYQPNLQQEMGALQERI--TSTKKGSVTSVQ 300

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  IVLNR+L E G YP VDPL S S + D      +  
Sbjct: 301 AVYVPADDLTDPAPATTFAHLDSTIVLNRALTEIGIYPAVDPLDSSSTILDAEIVGQEHY 360

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     D    + V +   I  FL Q 
Sbjct: 361 EVAREVQRVLQQYKELQDIIAILGMEELSDDQ-KQIVGRARRIQRFLSQP 409


>gi|228474924|ref|ZP_04059653.1| ATP synthase F1, beta subunit [Staphylococcus hominis SK119]
 gi|314935948|ref|ZP_07843298.1| ATP synthase F1, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271156|gb|EEK12536.1| ATP synthase F1, beta subunit [Staphylococcus hominis SK119]
 gi|313655954|gb|EFS19696.1| ATP synthase F1, beta subunit [Staphylococcus hominis subsp.
           hominis C80]
          Length = 470

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 186/411 (45%), Gaps = 16/411 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
            G ++ +      V      V       + +   + G     L   +++  D+V    + 
Sbjct: 3   NGRVTQVMGPVIDVRFEHNEVPEINNALIIEVPKNDGTFKLTLEVALQLGDDVVRTIAMD 62

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G+   +       GRV N LG+ ID ++ +        I  + P  
Sbjct: 63  STDGVQRGMQVVNTGKDISVPVGEETLGRVFNVLGETIDLNEKIDSSVRRDPIHRRQPNF 122

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                  +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + 
Sbjct: 123 DELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVF 182

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   +      + K+ +V    +E P  R    L+A+T+AEYF  +   
Sbjct: 183 AGVGERTREGNDLYYEMSDSGVINKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQ 242

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++
Sbjct: 243 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSI 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       + 
Sbjct: 301 QAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEH 360

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +   + ++ E +DI  I G     +      V +   I  FL Q+
Sbjct: 361 YEVAREVQSTLQKYRELQDIIAILGMDELSEED-KLTVERARRIQFFLSQN 410


>gi|112791386|gb|ABI21963.1| ATP synthase beta subunit [Samsonia erythrinae]
          Length = 421

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 105/381 (27%), Positives = 182/381 (47%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  +  ++  + +V + +   +V    +G  + +  G  V +      +       GR
Sbjct: 3   DALEVENGSAKLVLEVQQQLGGGVVRCISMGSSDGLRRGLTVENLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGDIGEEE-RWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|219670787|ref|YP_002461222.1| F0F1 ATP synthase subunit beta [Desulfitobacterium hafniense DCB-2]
 gi|254808146|sp|B8FZ34|ATPB_DESHD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219541047|gb|ACL22786.1| ATP synthase F1, beta subunit [Desulfitobacterium hafniense DCB-2]
          Length = 465

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 183/408 (44%), Gaps = 15/408 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV----CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           G I  I      V   S+ +          V + K    L     +  + V    +   +
Sbjct: 4   GKIVQIMGAVVDVEFASEALPEIYSAVKVTVPEKKIDLTLEVAQHLGNNTVRCVAMSSTD 63

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G    + G    +       GR+ N LGK ID  + +   D S  I    P  +++
Sbjct: 64  GLQRGMAALNTGAPITVPVGPATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + V
Sbjct: 123 DPSTVMLETGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGV 182

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVL 253
           GER RE  +   +      + K  +V    +E P  R    LT +T+AEYF   +  +VL
Sbjct: 183 GERTREGNDLWNEMRESGVIDKMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT+V ++
Sbjct: 243 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAI 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKL 372
            V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR+        +  K+
Sbjct: 301 YVPADDLTDPAPATAFAHLDATTVLNRAISEKGIYPAVDPLDSNSRILSPQILGEEHYKV 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ +++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 ARDVQQILQKYKELQDIIAILGMDELSEDE-KLVVSRARRIERFLSQP 407


>gi|241912850|gb|ACS72103.1| AtpB [Microchilus arietinus]
          Length = 489

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|210634568|ref|ZP_03298164.1| hypothetical protein COLSTE_02086 [Collinsella stercoris DSM 13279]
 gi|210158753|gb|EEA89724.1| hypothetical protein COLSTE_02086 [Collinsella stercoris DSM 13279]
          Length = 539

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 102/429 (23%), Positives = 174/429 (40%), Gaps = 27/429 (6%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNLGQVIRINLDIVYICPVGIGEEISL 83
           ++ +      V  L +    G+ +            G    ++ D V     G  + I  
Sbjct: 33  VAEVGDGIAHVFGL-KSAMAGELLEFTSSVTGRTVYGLAQNLDRDEVGAVLFGEVDSIKE 91

Query: 84  GDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           GD     GR   I       GRV+N LG+PIDG  S+G+      I  K P  + R  V 
Sbjct: 92  GDACRTTGRVMDIPVGRGMLGRVVNPLGQPIDGKGSIGQT-SRRPIEFKAPGVIERTPVC 150

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGR 200
           +  +TG+  +D   P+  GQR  +      GK+ +      +   +    +   VG++  
Sbjct: 151 EPVQTGLLAVDSMIPIGRGQRELIIGDRKTGKTAIAVDAIINQRGEGMICVYVAVGQKAS 210

Query: 201 EVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD--------- 250
            V    E     N    +V+V AT+ +S  L+ +AP+    I EYF   G+         
Sbjct: 211 TVAAVRETLAAHNALDYTVIVSATAADSAALQYIAPMAGAAIGEYFMYNGEDGQPASATN 270

Query: 251 ---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KG 305
              +VL++ D +++ A + R+++      P    YP  +F    RLLER     +    G
Sbjct: 271 PGGHVLVVYDDLSKQAVAYRQMSLTLRRPPGREAYPGDIFYLHSRLLERACKLSEANGGG 330

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +     + +  I  +V SI DG I L   L  +G+ P VD   SVSR+   A 
Sbjct: 331 SLTALPIIETQDGDVSAYIPTNVISITDGQIYLQSELFHQGQRPAVDVGISVSRVGGSAQ 390

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   K+   +L   +  + E   +     +   +D    K +     + + LKQ      
Sbjct: 391 TKAMKQQAGNLRLDLASYRE---LAGFMQFGSDLDAATQKQLTHGARMTELLKQGR--YK 445

Query: 426 SEDVFQEIT 434
           + DV +++ 
Sbjct: 446 ALDVVEQVA 454


>gi|182420269|ref|ZP_02951498.1| ATP synthase F1, beta subunit [Clostridium butyricum 5521]
 gi|237666447|ref|ZP_04526432.1| ATP synthase F1, beta subunit [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182375864|gb|EDT73456.1| ATP synthase F1, beta subunit [Clostridium butyricum 5521]
 gi|237657646|gb|EEP55201.1| ATP synthase F1, beta subunit [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 463

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 118/407 (28%), Positives = 192/407 (47%), Gaps = 16/407 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G +  +      +   S  +        ++ G+++  + +V   +  DIV    +   E 
Sbjct: 6   GKVVQVIGPVIDIKFDSDSLPNLYNSIHINMGEHT-LVAEVEQHVGDDIVRAIAMEATEG 64

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      GR   +       GR+ N LG PID    +   + S  I    P   ++ 
Sbjct: 65  LKRGMEAIDTGRPISVPVGKEVLGRLFNVLGNPIDNAGGVDAKE-SYPIHRPAPSFKDQA 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +   +     + + VG
Sbjct: 124 VEPEMFETGIKVIDLLAPYQKGGKTGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVG 183

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG +VLL 
Sbjct: 184 ERSREGNDLYHEMKDSGVIDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G  P A GY  ++ +E+  L ERI  +    G+IT+V +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRTPSAVGYQPTLATEMGALQERI--TSTVNGSITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVS 374
             D+  DP   +  + LD   VL+RS+ E G YP VDPL S SR+ D     D   K+ +
Sbjct: 302 PADDLTDPAPATTFTHLDAKTVLSRSIVELGIYPAVDPLESSSRMLDPRIVGDEHYKVAT 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            + +++ ++++ +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 362 EVKNVLEKYKQLQDIIAILGVDELGDE--DKAVVARARRIQRFLSQP 406


>gi|148377620|ref|YP_001256496.1| F0F1 ATP synthase subunit alpha [Mycoplasma agalactiae PG2]
 gi|226739915|sp|A5IYE3|ATPA_MYCAP RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|148291666|emb|CAL59052.1| ATP synthase alpha chain [Mycoplasma agalactiae PG2]
          Length = 528

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 104/423 (24%), Positives = 174/423 (41%), Gaps = 15/423 (3%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +      +   +   + GYI +I      V  L      G+ V  +    +  G V+ 
Sbjct: 10  AIIKDRIRRFDSKIDYSEIGYIVTIGDGIALVNGL-DNAKNGEIVKFKN---NITGLVLN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V +   G    +S  DL    G    +       GRVINA+G PIDG   +    
Sbjct: 66  LEEEVVGVAIFGDANMLSEADLCTRTGEVIAVPVGDELTGRVINAIGNPIDGKGPINSTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMF 181
              EI    P  M+R  V +  +TGI  ID   P+  GQR  +      GK+   + ++ 
Sbjct: 126 -RREIFKVAPGVMSRVEVNEPLETGIIAIDSMIPIGKGQRELIIGDRQTGKTSIAIDTII 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
            + D   K I   +G++   V +  +          + V+V+ + E    + +AP +   
Sbjct: 185 NQKDKNVKCIYVAIGQKNSTVAQITKKLQDSGAMEYTTVIVSGASELAPQQYIAPYSGTA 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE + S+G + L+I D +++ A + R ++      P    YP  VF    +LLER    
Sbjct: 245 IAEEWMSEGKDCLIIYDDLSKHAIAYRTLSLLLRRPPGREAYPGDVFYLHSQLLERAAKV 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITA+  +     + +  I  +V SI DG I    +L   G+ P VD   SVS
Sbjct: 305 NYSYGGGSITALPIIETQQGDISAYIPTNVISITDGQIFTRENLFHSGQRPAVDVGFSVS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     K++ SSL   + ++ E +       +   +D      +     +Y+ LK
Sbjct: 365 RVGSSAQIKAMKEVSSSLKLELAQYNEMQ---AFAQFGSDLDDSTIAILKHGHKVYELLK 421

Query: 419 QSP 421
           Q  
Sbjct: 422 QEQ 424


>gi|1703680|sp|P50002|ATPB_ACEWO RecName: Full=ATP synthase subunit beta, sodium ion specific;
           AltName: Full=Na(+)-translocating ATPase subunit beta
 gi|501149|gb|AAA79908.1| F1FO ATPase beta subunit [Acetobacterium woodii DSM 1030]
 gi|1096934|prf||2113197B Na ATPase:ISOTYPE=beta
          Length = 466

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 106/402 (26%), Positives = 180/402 (44%), Gaps = 12/402 (2%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      V     +   L + V  +      + +V  ++  DIV    +   + +
Sbjct: 6   GKVVQVIGPVVDVKFQKDKLPKLNNAVNIELNGHTLVIEVAQQLGDDIVRCIAMDSTDGL 65

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                    G   ++       GR+ N LG+PIDG     K  +   I    P    +Q 
Sbjct: 66  MRNQEAVDTGSAIQVPVGKATLGRMFNVLGEPIDGKPFDTKDVVMHPIHRHPPSFEEQQT 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 126 QPEMFETGIKVVDLICPYVRGGKIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   + +    + K+ +     +E P  R    L  +T+AEYF      +VLL 
Sbjct: 186 RTREGNDLYYEMMESGVINKTALCFGQMNEPPGARMRIALAGLTMAEYFRDDEGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V  
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTSKGSITSVQAVYD 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R++ E+G YP VDPL S SR+ D      +  +   
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRAITEKGIYPAVDPLDSTSRILDPKIVGQEHYETAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            +  ++ R++E +DI  I G     D      V +   +   
Sbjct: 364 EVQEILQRYKELQDIIAILGMDELSDAD-KITVSRARKVERL 404


>gi|312285249|gb|ADQ64366.1| ATP synthase beta subunit [Pachygone valida]
          Length = 468

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDPTTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|308062408|gb|ADO04296.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Cuz20]
          Length = 469

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GRIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|113910782|gb|ABI48123.1| ATPase beta subunit [Bazzania trilobata]
          Length = 472

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 178/412 (43%), Gaps = 24/412 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIGEEIS 82
           I  V        Q   + + +V +G+N+     D   +V ++  +  V    +   + + 
Sbjct: 5   IGPVLDVAFSPGQMPNIYNSLVVRGQNAAGQEIDVTCEVQQLLGNNKVRAVAMSATDGLM 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +     +  I    P        
Sbjct: 65  RGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRAAPAFTQLDTK 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ER 198
              F+TGI+V+D+  P   G +IG F G+G+GK+ L+     +       +S+ G   ER
Sbjct: 124 LSIFETGIKVVDLSAPYRRGGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVGER 183

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA T+AEYF     
Sbjct: 184 TREGNDLYMEMKESKVIDEQNISESKVALVYGQMNEPPGARMRVGLTASTMAEYFRDINK 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 244 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITS 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        +
Sbjct: 302 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEE 361

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 HYETAQGVKQTLQRYKELQDIIAISGLDESSEED-RLTVARARKIERFLSQP 412


>gi|112791352|gb|ABI21946.1| ATP synthase beta subunit [Erwinia americana]
 gi|112791354|gb|ABI21947.1| ATP synthase beta subunit [Hafnia alvei]
          Length = 421

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 178/379 (46%), Gaps = 10/379 (2%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
             V  G +   L    ++   +V    +G  + +  G  V +      +       GR++
Sbjct: 5   LEVENGASKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNLEHPIEVPVGKATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG+PID    +G+ +    I    P        ++  +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGEPIDMKGEIGEEE-RRAIHRPAPSYEELANSQELLETGIKVMDLMCPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|14718256|gb|AAK72866.1| ATP synthase beta subunit [Trillium erectum]
          Length = 483

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V   +  D +GQ I +  ++        V    
Sbjct: 20  GRIDQIXGPVLEVLXPPGKMPNIYNALVVTSQ--DTVGQKINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|189314225|gb|ACD89012.1| ATP synthase beta subunit [Borismene japurensis]
          Length = 467

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 179/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + L    VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLHATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI    G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIATLGLDELSEED-RLTVARARKIERFLSQP 412


>gi|167463135|ref|ZP_02328224.1| F0F1 ATP synthase subunit beta [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322383102|ref|ZP_08056929.1| F0F1 ATP synthase subunit beta-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321152764|gb|EFX45390.1| F0F1 ATP synthase subunit beta-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 468

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 180/368 (48%), Gaps = 11/368 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            +++  ++V    +   + +  G  V   G    +       GRV N LG+PIDGD    
Sbjct: 51  ALQLGDNLVRCVAMSSTDGLVRGMEVVDTGAPIMVPVGPSTLGRVYNVLGEPIDGDGEAD 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +  L+  I    P   +     +  +TGI+V+D+  P   G +IG+F G+G+GK+  +  
Sbjct: 111 RT-LTSPIHKPAPEYSDLTTQAEMLETGIKVVDLLAPYMKGGKIGLFGGAGVGKTVTMQE 169

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 170 LIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVIAKTAMVFGQMNEPPGARLRVAL 229

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 230 SGLTMAEYFRDEEGRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 289

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L RS+A +G +P VDPLA
Sbjct: 290 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATTNLERSIAAKGIFPAVDPLA 347

Query: 356 SVSRLA-DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR+   +    +  ++   +  ++ R++E +DI  I G     +      V++   I 
Sbjct: 348 STSRILTPQIVGEEHYEVAQGVKEILQRYKELQDIIAILGMDELSEED-KITVNRARRIE 406

Query: 415 DFLKQSPS 422
            FL Q   
Sbjct: 407 RFLSQPLH 414


>gi|157285025|gb|ABV31252.1| ATPase [Vibrio alginolyticus]
 gi|157285027|gb|ABV31253.1| ATPase [Vibrio alginolyticus]
 gi|157285029|gb|ABV31254.1| ATPase [Vibrio alginolyticus]
 gi|157285137|gb|ABV31308.1| ATPase [Vibrio alginolyticus]
 gi|157285303|gb|ABV31391.1| ATPase [Vibrio alginolyticus]
          Length = 441

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  ++  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKMTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQIGKTALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALQNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|119368476|sp|Q1CSD5|ATPB_HELPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 466

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 3   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 63  EGLVRNQIVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 407


>gi|6467938|gb|AAF13237.1|AF197604_1 ATPase beta subunit [Atherosperma moschatum]
          Length = 487

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQMNVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 431


>gi|4063538|gb|AAC98327.1| ATP synthase beta subunit [Carica papaya]
          Length = 456

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTVRQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|2623222|gb|AAB86421.1| ATP synthase beta-subunit [Mus musculus]
          Length = 529

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 186/414 (44%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ S  + +V   +    V    +   E
Sbjct: 58  TATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  +  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GE+ RE  +   + +        D   K  +V    +E P       LT +T+AEYF  +
Sbjct: 237 GEKTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGAPTRVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 NEHYDVARGVQKILQDYKFFQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|222823236|ref|YP_002574809.1| ATP synthase F1 sector, beta subunit [Campylobacter lari RM2100]
 gi|254808137|sp|B9KES3|ATPB_CAMLR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222538457|gb|ACM63558.1| ATP synthase F1 sector, beta subunit [Campylobacter lari RM2100]
          Length = 484

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVEFKDYLPQINEAIVVNYELEGKECKLVLEVAAHLGDNKVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N  G  ID  + +   D    I    PP   
Sbjct: 63  DGLVRGLTAVATGNPISVPVGEKVLGRIFNVTGDLIDEGEEINF-DKHWSIHRDPPPFEE 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNRS+AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLIVERARKIEKFLSQP 407


>gi|259417146|ref|ZP_05741065.1| flagellum-specific ATP synthase [Silicibacter sp. TrichCH4B]
 gi|259346052|gb|EEW57866.1| flagellum-specific ATP synthase [Silicibacter sp. TrichCH4B]
          Length = 447

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 169/440 (38%), Positives = 265/440 (60%), Gaps = 6/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M K+++ L+Q  E  +  L    G ++ I+     V+ L     +GD  V+ +GK  D  
Sbjct: 6   MMKSIQALSQ--ELANTRLAAPMGRVTGISGGEIEVSGLETQARIGDRLVLRRGKKDDLH 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+ I  + + + P    E  S+GD V  +     +P   W GRVI+  G+P+DG   L
Sbjct: 64  GEVLAIGANHIRMLPDTAPERASIGDAVLLFETPEFAPDNSWIGRVIDPFGEPLDGKPML 123

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G  S ++M   P A  R+ + K   TG+ +++   P+  GQRIG+FAGSG+GKSTL++
Sbjct: 124 -RGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQRIGLFAGSGVGKSTLMA 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+++ LG + +K++VVV ATSD+S ++R+    +A
Sbjct: 183 QLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVVVAATSDQSALVRRRCAWSA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AE+F  +G NVL + DSITRFA + REIA  SGE P  RG+P SV   +  L ER G
Sbjct: 243 MSVAEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAPALRGFPPSVTPLITGLCERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P +D   SVS
Sbjct: 303 PGLEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A + +E +++ ++   +  +E++  +   G Y  G DL+LD+AV   P +  F  
Sbjct: 363 RSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAGLYSEGNDLVLDQAVKIWPELDSFFG 422

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           +  +D  ++  F  +   L+
Sbjct: 423 RDETD-GTQGSFNRLALLLR 441


>gi|183206516|gb|ACC54456.1| ATP synthase beta subunit [Phyteuma spicatum]
          Length = 480

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D LGQ I +  ++        V    
Sbjct: 3   GRIGQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTLGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDMGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++     +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLXRIPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +  YP VDPL S S + 
Sbjct: 298 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKXIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S +  K   S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVSDEHYKTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|119350477|gb|ABL63189.1| AtpB [Chlorococcum echinozygotum]
          Length = 390

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 168/365 (46%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I
Sbjct: 3   VRAVSMQPTDGLMRGMEVLDTGKPLIVPVGKVTLGRIFNVLGEPVDNMGPV-KIEDTLPI 61

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 62  HRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 121

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P       LT
Sbjct: 122 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPXXXXXVALT 181

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 182 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQER 241

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 242 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLES 299

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 300 TSTMLQPWILGEKHYQTAQNVKKTLQRYKELQDIIAILGLDELSEED-RLTVARARKIER 358

Query: 416 FLKQS 420
           FL Q 
Sbjct: 359 FLSQP 363


>gi|11558464|emb|CAC17750.1| ATP synthase subunit B [Deutzia rubens]
          Length = 487

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 171/379 (45%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG+P+D
Sbjct: 53  NVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 112

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +    ++  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 113 NLGPVD-TRITSPIHRCAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 171

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 172 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQ 231

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 232 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 291

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 292 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 349

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 350 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 409

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 410 D-RLTVARARKIERFLSQP 427


>gi|70997705|ref|XP_753589.1| ATP synthase F1, beta subunit [Aspergillus fumigatus Af293]
 gi|66851225|gb|EAL91551.1| ATP synthase F1, beta subunit, putative [Aspergillus fumigatus
           Af293]
 gi|159126680|gb|EDP51796.1| ATP synthase F1, beta subunit, putative [Aspergillus fumigatus
           A1163]
          Length = 519

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 189/438 (43%), Gaps = 21/438 (4%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVY 71
            ++ +     G I  +      V      +  + + +  +      + +V   +  ++V 
Sbjct: 39  RFASSEAGSVGKIHQVIGAVVDVKFDGDNLPAILNAIETENNGQKLVLEVSQHLGENVVR 98

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   E ++ G      G   +I       GR++N  G PID    +     +  I +
Sbjct: 99  TIAMDGTEGLTRGAPARDTGAPIKIPVGPGTLGRIVNVTGDPIDERGPIKATKFA-PIHA 157

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P    +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +      
Sbjct: 158 EAPEFTEQSTSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHG 217

Query: 191 IISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
             S+   VGER RE  +   +         +   K  +V    +E P  R    LT +TI
Sbjct: 218 GYSVFTGVGERTREGNDLYHEMQETGVIQLEGESKVALVFGQMNEPPGARARVALTGLTI 277

Query: 242 AEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +
Sbjct: 278 AEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--T 335

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 336 TTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRM 395

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +   + + +  ++  ++  +DI  I G     +      V +   +  FL Q
Sbjct: 396 LDPRIVGEEHYAVATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQ 454

Query: 420 SPSDLSSEDVFQEITKKL 437
                +   VF  I  KL
Sbjct: 455 P---FTVAQVFTGIEGKL 469


>gi|189017702|gb|ACD71520.1| F1-ATPase alpha subunit [Cymbocarpa refracta]
          Length = 378

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 154/373 (41%), Gaps = 19/373 (5%)

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122
            +  + V I   G    I  GDLV   G     P      GRV++A+G PIDG  +L   
Sbjct: 1   NLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVHAMGVPIDGRGALSDH 60

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +     
Sbjct: 61  E-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 119

Query: 183 RSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
            +                 +   +G++   V + ++     N  + S++V AT+ +   L
Sbjct: 120 LNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPL 179

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF   
Sbjct: 180 QFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLH 239

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G+ TA+  +     + +  I  +V SI DG I     L   G  
Sbjct: 240 SRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGIR 299

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P ++   SVSR+   A     K++  S    + ++ E   +     +   +D      ++
Sbjct: 300 PAINVGLSVSRVGSAAQLRTMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAATQALLN 356

Query: 409 QVPIIYDFLKQSP 421
           +   + +  KQ  
Sbjct: 357 RGARLTEVPKQPQ 369


>gi|113910854|gb|ABI48159.1| ATPase beta subunit [Bryoxiphium norvegicum]
          Length = 472

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPIDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  +  D   VL+R LA +G YP VDPL   S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDPLDPTSTMLQP 355

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 RIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|52082877|gb|AAU26019.1| ATPase beta subunit [Anemopsis californica]
          Length = 469

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDMGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|149912828|ref|ZP_01901362.1| flagellum-specific ATP synthase [Roseobacter sp. AzwK-3b]
 gi|149813234|gb|EDM73060.1| flagellum-specific ATP synthase [Roseobacter sp. AzwK-3b]
          Length = 474

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 162/417 (38%), Positives = 241/417 (57%), Gaps = 4/417 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G +S+I S    +  LS+   LGD V    +++  LG +V+R++ D+  + P    + + 
Sbjct: 23  GRVSAIQSQLLGIAGLSRVAKLGDRVEIACRDAVILGGEVLRLDGDLANVMPDFPPDRVH 82

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           +GD V       I PS  W GR+++  G+P+DG   L KG     + +  P A +R+   
Sbjct: 83  IGDRVRIADSALIRPSDRWIGRIVDPFGQPLDGR-PLPKGATGSALRADPPSAASRRGFG 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
              +TG+   +   P+  GQRIG+FAGSG+GKSTLL+   R+   D V+ +L+GERGRE+
Sbjct: 142 PRLETGLAAFNTLLPIVRGQRIGLFAGSGVGKSTLLATLGRNTQADVVVFALIGERGREL 201

Query: 203 REFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           R FIE  LG     +SVVV ATSD+SP+ R+    TA+ +AEYF   G  VLL+ DSITR
Sbjct: 202 RHFIETGLGPEGMLRSVVVAATSDQSPLARRRCAWTAMAVAEYFRDAGKQVLLMFDSITR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
           FA + RE+A  +GELP  RG+P S    +  L ER GP  +   +ITA+ SVLV G + +
Sbjct: 262 FAEAHREVAIAAGELPTMRGFPASTSHMIMSLCERAGPGAQGCADITALFSVLVAGSDLD 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +P+AD +R +LDGH+VL+R +AE GRYP +D L SVSR   +A S  E +++     L+ 
Sbjct: 322 EPVADILRGVLDGHVVLDRQIAERGRYPAIDLLRSVSRSLPQAASDAENQMILRARALLG 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            +  +  +   G Y  G D  LD+A+   P +  FL      +S+++ F  +   L+
Sbjct: 382 AYARSETMLRAGLYNEGSDPELDQAIRAWPELDAFLS-ETEPVSAQNSFDRLNLILR 437


>gi|75336640|sp|Q9MU81|ATPB_CARMI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7582346|gb|AAF64288.1| ATP synthase beta subunit [Caryota mitis]
          Length = 498

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TG +V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGXKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|16943668|emb|CAD10762.1| atp synthase, beta subunit [Caesia contorta]
          Length = 494

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG P+D    +     +  I    P
Sbjct: 79  MSATDGLTRRMEVIDTGAPLSVPVGGATLGRIFNVLGDPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLETKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINQKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5758888|gb|AAD50862.1| ATP synthase beta subunit [Heliconia paka]
          Length = 496

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMGVIDTGAPLSVPVGGATLGRISNVLGEPVDNLGPVDTSTTS-PIHRPAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|149384745|gb|ABR25181.1| ATP synthase beta chain [Saccoloma inaequale]
          Length = 426

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPV-ENS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  ITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         +    GER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA T+AEYF      +VLL +D+I RF  +  E++ + G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSASLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|133917168|emb|CAJ33225.1| ATP synthase alpha subunit [Lactobacillus curvatus]
          Length = 355

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 96/352 (27%), Positives = 152/352 (43%), Gaps = 10/352 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGD 116
           + G    +  + V I  +G  E I  GD V   GR   +       GRV+N LG+P+DG 
Sbjct: 8   SYGVAQNLETNDVGIIILGEYENIREGDQVKRTGRIMEVPVGDALIGRVVNPLGQPVDGK 67

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
             + K D +  I  K P  M RQ V +  +TG++ ID   P+  GQR  +      GK+ 
Sbjct: 68  GEI-KTDKTRPIEKKAPGVMARQSVSEPLQTGLKAIDALVPIGRGQRELIIGDRKTGKTS 126

Query: 176 -TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233
             + ++  + D     I   +G++   VR  +E          ++VV A   +   L  +
Sbjct: 127 VAIDTIINQKDQDMICIYVAIGQKESTVRAQVETLRRYGAMDYTIVVEAGPSQPAPLLYI 186

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + REI+      P    YP  +F    RL
Sbjct: 187 APYAGAAMGEEFMYNGKHVLIVYDDLSKQAAAYREISLLLRRPPGREAYPGDIFYLHSRL 246

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      E   G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 247 LERAAKLSDELGGGSMTALPIIETQAGDISAYIPTNVISITDGQIFLESDLFYSGTRPAI 306

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           D  +SVSR+   A +   KK+  +L   +  + E         +   +D   
Sbjct: 307 DAGSSVSRVGGAAQTKAMKKVSGTLRLDLSSYRELE---AFTQFGSDLDAAT 355


>gi|109066521|ref|XP_001091520.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Macaca
           mulatta]
          Length = 529

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 186/414 (44%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+P D    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPFDERGPI-KTKQFAAIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLTTDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|27435914|gb|AAO13287.1| ATP synthase beta subunit [Welwitschia mirabilis]
          Length = 461

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 105/385 (27%), Positives = 169/385 (43%), Gaps = 19/385 (4%)

Query: 51  HQGKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINA 108
             G+      +V ++  +  V    +   + +  G  V   G    +       GR+ N 
Sbjct: 29  IDGREISVTCEVQQLLGNNTVRAVAMSATDGLKRGMKVIDTGAPLSVPVGKATLGRIFNV 88

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+P+D    + + D +  I    P           F+TGI+V+D+  P   G +IG+F 
Sbjct: 89  LGEPVDNLGPV-ETDKTSPIHRSAPTFPELDTNLAIFETGIKVVDLLAPYRRGGKIGLFG 147

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKS 217
           G+G+GK+ L+     +       +S+ G   ER RE  +   +               K 
Sbjct: 148 GAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKQSGVINEKNITESKV 207

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R     TA+ +AEYF      +VLL +D+I RF  +  EI+   G +
Sbjct: 208 ALVYGQMNEPPGARMRVGFTALAMAEYFRDVNKQDVLLFIDNIFRFVQAGSEISALLGRM 267

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 268 PSAVGYQPTLSTEMGSLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 325

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G 
Sbjct: 326 VLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQGVKQTLQRYKELQDIITILGL 385

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
               +      V +   I  FL Q 
Sbjct: 386 DELSEED-RLTVARARKIERFLSQP 409


>gi|19033063|gb|AAL83516.1|AF408788_1 ATP synthase beta subunit [Coleochaete orbicularis]
 gi|37543303|gb|AAL92716.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 402

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|6017804|gb|AAF01636.1| ATP synthase beta subunit [Hydrastis canadensis]
          Length = 496

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V   +  +  + + +V +G+  D  G+ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPAGKMPNIYNALVVKGQ--DTAGRQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATEGLMRGMEVMDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKXGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|75330424|sp|Q8MBG0|ATPB_CUSJA RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|21633457|gb|AAM52203.1| ATP synthase beta subunit [Cuscuta japonica]
          Length = 490

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 189/439 (43%), Gaps = 26/439 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL 59
           M+ N  T         K      G I  I      V     +   + + +V +G++++ +
Sbjct: 1   MRINPPTYGSEISSIEKK---NRGCIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTEQM 57

Query: 60  ---GQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
               +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 58  NVTCEVQQLLGNNRVRAVAMNDTDGLMRGMEVIDTGTPITVPVGGSTLGRIFNVLGEPVD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   + +  I    P  +        F+TGI+V+D   P   G +IG+F G+G+GK
Sbjct: 118 NFGPVD-TNTTSTIHRSAPAFIQLDTKLSIFETGIKVVDFLAPYRRGGKIGLFGGAGVGK 176

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 177 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINENNITESKVALVYGQ 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 237 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 297 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 354

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 355 AAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEE 414

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 415 D-RLTVARARKIERFLSQP 432


>gi|29726136|gb|AAD00594.2| ATP synthase beta subunit [Argemone mexicana]
          Length = 490

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGAALGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|296112610|ref|YP_003626548.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4]
 gi|295920304|gb|ADG60655.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4]
 gi|326560870|gb|EGE11235.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 7169]
 gi|326563892|gb|EGE14143.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 46P47B1]
 gi|326566901|gb|EGE17040.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 103P14B1]
 gi|326569769|gb|EGE19819.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC8]
 gi|326570800|gb|EGE20825.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC1]
 gi|326571625|gb|EGE21640.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC7]
 gi|326575096|gb|EGE25024.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis CO72]
 gi|326576818|gb|EGE26725.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 101P30B1]
 gi|326577729|gb|EGE27605.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis O35E]
          Length = 473

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 178/418 (42%), Gaps = 24/418 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G I  I      V      V      +H       L    ++   +V    +G  E + 
Sbjct: 2   SGRIVQIIGAVIDVEFSRGDVPQIFDALHVDGTETTLEVQQQLGDGVVRTIAMGSTEGLK 61

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G    +       GR+++ LG+PID    +   +    I  + P    +   
Sbjct: 62  RGLPVSNSGAPISVPVGQATLGRIMDVLGRPIDEAGPVN-AEQKWSIHREAPSYDEQSNS 120

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VGER
Sbjct: 121 TELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGER 180

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +F  +               K  +V    +E P  R    LT +T+AEYF  + D
Sbjct: 181 TREGNDFYHEMQEAGVVNTEDFTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKD 240

Query: 251 NVL-------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                     L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 241 EATGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTQ 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S SR  D 
Sbjct: 299 SGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +   +   +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 359 QVIGEEHYSVARGVQEVLQRYKELKDIIAILGMDELSEED-KLVVYRARKIQRFLSQP 415


>gi|254440915|ref|ZP_05054408.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 307]
 gi|198250993|gb|EDY75308.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 307]
          Length = 474

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 185/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    +   + + +       D + +V   +  + V    +   E + 
Sbjct: 6   GKITQVIGAVVDVQFDKELPAILNALKTSNNGKDLVLEVAQHLGENTVRAIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N  G P+D    + K D    I  + P   ++   
Sbjct: 66  RGQEVADQGSPITVPVGVGTLGRILNVTGDPVDEKGPV-KSDQRRSIHGEAPKFEDQSTA 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 TEILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGVSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    LT +++AE F     
Sbjct: 185 TREGNDLYHEMIESGVINLENLEESKIALVYGQMNEPPGARMRIALTGLSLAEQFRDDTG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI     + G+IT+
Sbjct: 245 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERIA--STKGGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V +V V  D+  DP   +  + LD   VL+R+++E+G YP VDPL S SRL D     D 
Sbjct: 303 VQAVYVPADDLTDPAPATSFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGDE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+ + +  ++ R++  +DI  I G     +      V +   +  FL Q P D++
Sbjct: 363 HYKVATDVQQILQRYKSLQDIIAILGMDELSEDD-KMTVTRARKLERFLSQ-PFDVA 417


>gi|89242546|gb|ABD64631.1| ATPase beta subunit [Hydrocleys nymphoides]
          Length = 436

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVDTSTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEENIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|29726130|gb|AAD00592.2| ATP synthase beta subunit [Eschscholzia californica]
          Length = 484

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 36  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMGVIDTGAPLSVPVGGATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 96  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 154

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 155 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 215 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 274

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 275 LGXXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 332

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +     R++E +DI  
Sbjct: 333 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRYKELQDIIA 392

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 393 ILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|12004151|gb|AAG43915.1|AF213784_1 ATP synthase beta subunit [Primula gaubaeana]
          Length = 450

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIR--------INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I         +  + V    +   + ++ G  V   G    +       GR
Sbjct: 19  KGRDTAGQPINVPCEVHQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 78

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 79  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 137

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE---FIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G  G   RE      +             
Sbjct: 138 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGXDLPMEMKESGVINEENIA 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 198 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 257

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 258 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 315

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 316 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRYKELQDIIA 375

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 376 ILGLDELSEED-RLTVARARKIERFLSQP 403


>gi|20467393|gb|AAL27827.1| ATPase beta subunit [Pinus peuce]
          Length = 442

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 28  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMTVIDTGAPLSVPVGGATLGRIFNVLG 87

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 88  EPVDNLGPVD-ARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 146

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 147 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 206

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 207 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 266

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 267 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 324

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 325 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 384

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 385 LSEED-RLIVARARKIERFLSQP 406


>gi|330447620|ref|ZP_08311268.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491811|dbj|GAA05765.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 461

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 107/409 (26%), Positives = 186/409 (45%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           +  G I  +      V      V        +   ++++ + +V + I   +V    +G 
Sbjct: 1   MSTGKIVKVIGAVVDVEFDQDSVPRVYDALNLVDSEHAELVLEVQQQIGSGVVRCIAMGS 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V +      +       GR++N LG PID    +G+      I    P   
Sbjct: 61  SDGLRRGLEVVNTKAPITVPVGEETLGRIMNVLGTPIDECGEIGE-KKKYAIHRAAPSYE 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + +
Sbjct: 120 DQSNSSELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFT 179

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            VGER RE  +F  +     +  K  +V    +E P  R    LT +TIAE F  +G +V
Sbjct: 180 GVGERTREGNDFYYEMKEAGVLDKVSMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +
Sbjct: 240 LLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D      +   
Sbjct: 298 VYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYD 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 VARGVQTVLQRYKELKDIIAILGMDELSEED-KQTVSRARKIERFLTQP 405


>gi|238925243|ref|YP_002938760.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
 gi|238876919|gb|ACR76626.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656]
          Length = 463

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G I  +      V    + +  + D +     +  ++ +V   I  + V    +   E 
Sbjct: 3   TGKIIQVMGPVVDVEFEDENLPAIRDALEVLNGDKKSVMEVAQHIGNNTVRCIMLASSEG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V   G   +        GR+ N LG+ IDG  +    +   EI  + P    + 
Sbjct: 63  LHRDMEVTATGAGIKTPVGEQTLGRLFNVLGEAIDG-GAQPDTEEKWEIHREPPTFEEQN 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
             E+  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VG
Sbjct: 122 PAEEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVG 181

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL
Sbjct: 182 ERSREGNDLWTEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLL 241

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V 
Sbjct: 242 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVY 299

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ 
Sbjct: 300 VPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEPDIVGEEHYQVA 359

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ +++E +DI  I G     D      V++   I  FL Q 
Sbjct: 360 RKVQEILQKYKELQDIIAILGMEELADED-KVLVYRARKIQKFLSQP 405


>gi|124361606|gb|ABN09245.1| ATP synthase beta subunit [Diospyros abyssinica]
          Length = 464

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 29  KGRDTVGQSINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEAIDTGAPLSVPVGGVTLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|5758871|gb|AAD50845.1| ATP synthase beta subunit [Cyanella hyacinthoides]
          Length = 496

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  LSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|224830530|gb|ACN66360.1| ATP synthase beta chain [Dioscoreophyllum cumminsii]
          Length = 489

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQDTVGHQINVTCEVQQLLGNNRVRAVAMS 74

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 75  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAF 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 134 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 193

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 194 GGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEY 253

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 254 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 311

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 312 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 371

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 RIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|121605228|ref|YP_982557.1| F0F1 ATP synthase subunit alpha [Polaromonas naphthalenivorans CJ2]
 gi|190358157|sp|A1VPQ8|ATPA2_POLNA RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|120594197|gb|ABM37636.1| ATP synthase F1, alpha subunit [Polaromonas naphthalenivorans CJ2]
          Length = 520

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 112/433 (25%), Positives = 182/433 (42%), Gaps = 15/433 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + +   +L    E Y+  L   + G I+ +++    V+ L   V   + V   G   +  
Sbjct: 12  LDRTFASLRHGLETYTAQLTPHEVGTITRVSTGIAMVSGL-PGVGFEELVSFSG---NVF 67

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDS 118
           G    ++   + +  +G    +  GD V   GR           GRVI+ LG+P+D    
Sbjct: 68  GIAFNVDETEIGVVLLGDYGHLHAGDPVRRTGRVMDVAVGEGLLGRVIDPLGRPLDSLGP 127

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +      + +     P M+R  V    +TG++V+D   P+  GQR  +      GK+ + 
Sbjct: 128 VVSS-ARLALERPAAPIMDRAPVTVPLQTGLKVVDALIPIGRGQRELILGDRQTGKTAIA 186

Query: 179 SMFARSDCFDKV--IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +     V  +   +G+R   V   I           +VVVV   ++ P L  +AP
Sbjct: 187 VDTILNQRGQDVLCVYCAIGQRAAAVARTIAVLREKGAMEYTVVVVTEGNDPPGLAYIAP 246

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A +IAE+F   G +VL++ D +T+ A + RE++      P    +P  +F    RLLE
Sbjct: 247 YAATSIAEHFMEMGRDVLVVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLE 306

Query: 296 RIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E+  G++TA+  +  +  N +  I  ++ SI DG I L+ SL E G  P VD 
Sbjct: 307 RATHLRPERGGGSLTALPIIETEAQNMSAYIPTNLISITDGQIYLSPSLFELGVLPAVDV 366

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  KA  A  + +   L     +FEE       G     +D    K +     I
Sbjct: 367 SKSVSRVGGKAQRAAYRAVTGDLKLAYAQFEELETFARFG---ARLDENTQKIIEHGRRI 423

Query: 414 YDFLKQSPSDLSS 426
              L+Q  S   S
Sbjct: 424 RACLQQPESAPVS 436


>gi|149913696|ref|ZP_01902229.1| ATP synthase F1, beta subunit [Roseobacter sp. AzwK-3b]
 gi|149812816|gb|EDM72645.1| ATP synthase F1, beta subunit [Roseobacter sp. AzwK-3b]
          Length = 474

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 185/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +         + +V   +  + V    +   E + 
Sbjct: 6   GTITQVIGAVVDVQFEDHLPEILNALDTDNNGKRLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    I       GR++N +G+P+D    +   +    I    P    +   
Sbjct: 66  RGQTVTDTGGPITIPVGDVTLGRILNVVGEPVDEGAPIVAKE-RRSIHQPAPEFSEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLPDSQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKAGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPSIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYKVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|42559018|gb|AAS20195.1| ATP synthase beta subunit [Cyperus papyrus]
          Length = 468

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 109/389 (28%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 28  KGRDTVGQQINVTCEVQQLLGNSLVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +    +S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPIDNLGPVDISTIS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLS 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP V PL S S +   +   D   +    +     R++E +DI  
Sbjct: 325 DATTVLSRPLAAKGIYPAVSPLDSTSTMLQPSIVGDEHYETAQRVKQTSQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|16801734|ref|NP_472002.1| F0F1 ATP synthase subunit beta [Listeria innocua Clip11262]
 gi|81853853|sp|Q927W4|ATPB2_LISIN RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|16415209|emb|CAC97899.1| atpD [Listeria innocua Clip11262]
          Length = 473

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 177/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            I++  D+V    +   + +  G  V   G    +       GRV N LG  ID D+ L 
Sbjct: 51  AIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                 +I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 SDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++ + +  L+ R++E +DI  I G     D    ++V +   + 
Sbjct: 349 STSRALSPDIVGEEHYEVATEVQRLLQRYKELQDIIAILGMDELSDED-KQSVSRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|241912902|gb|ACS72129.1| AtpB [Pterostylis oliveri]
          Length = 489

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|157689152|gb|ABV65132.1| ATP synthase CF1 beta subunit [Euonymus americanus]
          Length = 498

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     S+ I    P  
Sbjct: 81  ATDGLMRGMDVIDTGAPLSVPVGVATLGRIFNVLGEPVDNLGPVDTRTTSL-IHKSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLNVARARKIERFLSQP 434


>gi|112791408|gb|ABI21974.1| ATP synthase beta subunit [Erwinia tracheiphila]
          Length = 421

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 175/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G + V       +       GR++N LG+PID    +G+ +
Sbjct: 22  LGGGVVRTIAMGSSDGLKRGLETVDLEHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEE 81

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 82  -RWAIHRSAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 140

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 141 NIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 200

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 201 TMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 258

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 259 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 318

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +   +   +  L+ R++E +DI  I G     +      V +   +  FL 
Sbjct: 319 QLDPLVVGQEHYDVARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLS 377

Query: 419 QS 420
           Q 
Sbjct: 378 QP 379


>gi|7688419|emb|CAB89736.1| ATP synthase beta subunit [Viburnum opulus]
          Length = 492

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V  G+++     +   +V ++  +  V    + 
Sbjct: 19  GRIVQIIGPVXDVAFPPGKMPNIYNALVVXGRDTAVQPMNVXCEVQQLLGNNRVRAVAMS 78

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 79  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 137

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 138 IQLDTKLSIFETGIKVVDLLAPXRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 197

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 198 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 257

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 258 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 315

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 316 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 375

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 432


>gi|297380310|gb|ADI35197.1| ATP synthase F1, beta subunit [Helicobacter pylori v225d]
          Length = 469

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GRIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + +    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPIKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|291524473|emb|CBK90060.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale DSM
           17629]
 gi|291527484|emb|CBK93070.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale
           M104/1]
          Length = 463

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 187/407 (45%), Gaps = 13/407 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G I  +      V    + +  + D +     +  ++ +V   I  + V    +   E 
Sbjct: 3   TGKIIQVMGPVVDVEFEDENLPAIRDALEVLNGDKKSVMEVAQHIGNNTVRCIMLASSEG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V   G   +        GR+ N LG+ IDG  +    +   EI  + P    + 
Sbjct: 63  LHRDMEVTATGAGIKTPVGEQTLGRLFNVLGEAIDG-GAQPDTEEKWEIHREPPTFEEQN 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
             E+  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VG
Sbjct: 122 PAEEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVG 181

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL
Sbjct: 182 ERSREGNDLWTEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLL 241

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V 
Sbjct: 242 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVY 299

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ 
Sbjct: 300 VPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEPDIVGEEHYQVA 359

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ +++E +DI  I G     D      V++   I  FL Q 
Sbjct: 360 RKVQEILQKYKELQDIIAILGMEELADED-KVLVYRARKIQKFLSQP 405


>gi|150035715|gb|ABR67203.1| ATP synthase beta subunit [Chasmanthium latifolium]
          Length = 422

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + +    +   + +  G  V   G    +       GR+ N LG+PID    +    
Sbjct: 4   LGNNRIRAVAMSATDGLMRGMEVIDTGAALCVPVGGATLGRIFNVLGEPIDNLGPVDTS- 62

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 63  ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 122

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 123 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARM 182

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 183 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 242

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 243 SLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAV 300

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 301 DPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARA 359

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 360 RKIERFLSQP 369


>gi|112361349|gb|ABI15720.1| putative ATP synthase F1 alpha subunit [Pseudomonas veronii]
          Length = 515

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 15/420 (3%)

Query: 8   LAQLAEDYSKNLVV-QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           + Q  + +  +L + + G + S+++    V  L  +V   + +   G  S   G    ++
Sbjct: 20  IGQRLQAFKPHLALHEVGTVVSVSTGIARVHGL-PHVGFEELLTFPGGLS---GIAFNLD 75

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V +  +G    +  G  V   GR           GRVI+ LG+ +DG  +       
Sbjct: 76  EEGVDVVLLGDSAHLRAGQEVRRTGRVMDVAVGDGLLGRVIDPLGRALDG-GAQPVTRSR 134

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFAR 183
           + I     P M+R  V +  +TG++VID   P+  GQR  +      GK+ +   ++F +
Sbjct: 135 LPIERPAAPIMDRAPVTEPLQTGLKVIDALIPIGRGQRELILGDRQTGKTAIAIDAIFNQ 194

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            D     +   +G+R   V + + +         +VVVVA  +E+P L  +AP  A +IA
Sbjct: 195 RDKNVLCVYCAIGQRASAVAKAVANLRERGALAYTVVVVAEGNEAPGLSYIAPYAATSIA 254

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS-- 300
           E+F   G +VL++ D +T  A + RE++      P    +P  +F    R+LER      
Sbjct: 255 EHFMEAGRDVLVVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRMLERATHLSQ 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           E+  G++TA+  +  +  N +  I  ++ SI DG IVL+ SL E G  P +D   SVSR+
Sbjct: 315 ERGGGSMTALPIIETEAQNISAYIPTNLISITDGQIVLSPSLFELGVLPAIDVGRSVSRV 374

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             KA     + +   L     +FEE       G     +D     ++     I   L QS
Sbjct: 375 GGKAQRPAYRAVAGDLKLAYAQFEELETFARFG---ARLDEDTRLSIVHGQRIRACLGQS 431


>gi|16943753|emb|CAD10767.1| atp synthase, beta subunit [Trillium erectum]
          Length = 498

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V   +  D +GQ I +  ++        V    
Sbjct: 21  GRIDQIIGPVLEVLFPPGKMPNIYNALVVTSQ--DTVGQKINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|52082887|gb|AAU26024.1| ATPase beta subunit [Takhtajania perrieri]
          Length = 472

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGSDELSEED-RLTVARARKIERFLSQP 409


>gi|241912914|gb|ACS72135.1| AtpB [Spiranthes spiralis]
          Length = 489

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V Q  + D +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVIFPPGKMPNIYNALVIQ--SRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIKLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|186886257|gb|ACC93531.1| ATPase F1 alpha subunit [Juncus regelii]
          Length = 345

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 88/348 (25%), Positives = 152/348 (43%), Gaps = 18/348 (5%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +LG  +   
Sbjct: 2   ENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGAPIDGKGALGDHE-RR 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL--------- 177
            +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +         
Sbjct: 61  RVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQK 120

Query: 178 -LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAP 235
            ++   + +     +   +G++   V + ++     N    SV+V AT+ +   L+ +AP
Sbjct: 121 EMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDPAPLQFLAP 180

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLE
Sbjct: 181 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 240

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 241 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 300

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
             SVSR+   A     K++  SL   + ++ E   +     +   +D 
Sbjct: 301 GLSVSRVGSAAQLKTMKQVCGSLKLELAQYRE---VAAFAQFGSDLDA 345


>gi|157285221|gb|ABV31350.1| ATPase [Vibrio natriegens]
          Length = 441

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RFALALNLERDSVGAVVMGPYADLREGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  ++  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKMTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQIGKTALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALQNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|75336583|sp|Q9MTY2|ATPB_SARHE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7688037|emb|CAB89723.1| ATP synthase beta subunit [Saruma henryi]
 gi|33327769|gb|AAQ09248.1| ATP synthase beta subunit [Saruma henryi]
          Length = 498

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +      FVV   K  D  GQ I +  ++        V   
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNAFVV---KGRDTAGQQINVTCEVQQLLGNNRVRTV 77

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 78  AMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 136

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 137 PAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 196

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 197 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTM 256

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 257 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 314

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 315 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 374

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 375 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 433

Query: 420 S 420
            
Sbjct: 434 P 434


>gi|157285213|gb|ABV31346.1| ATPase [Vibrio splendidus]
          Length = 441

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 95/405 (23%), Positives = 173/405 (42%), Gaps = 25/405 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            +   + ++ E   +     +   +D    K +     + + +KQ
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQ 397


>gi|112791368|gb|ABI21954.1| ATP synthase beta subunit [Brenneria rubrifaciens]
          Length = 416

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 106/381 (27%), Positives = 181/381 (47%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           D +  +      + +V + +   +V    +G  + +  G  V + G    +       GR
Sbjct: 1   DALEVENGAERLVLEVQQQLGGGVVRCISMGSSDGLRRGLNVSNLGHAIEVPVGKATLGR 60

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 61  IMNVLGEPVDMKGDIGEEEC-WPIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 119

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 120 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 179

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 180 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 239

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 240 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 297

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 298 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSVLQRYQELKDIIAILGMDELS 357

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 358 EED-KLVVSRARKIQRFLSQP 377


>gi|332146781|dbj|BAK19938.1| ApNa+ATPase alpha subunit [Aphanothece halophytica]
          Length = 514

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 180/407 (44%), Gaps = 14/407 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + S++S   TV+ L     L + +         LG    ++ + + +  +G  E +
Sbjct: 34  EVGIVKSVSSGIATVSGL-FGARLDELIEFPEG---LLGIAFNLDAEEIGVILLGDSEGV 89

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD V+  GR   +       GRV++ LG+P+D    +   +  +         M R  
Sbjct: 90  QAGDKVYRLGRILDVPVGEALLGRVVDGLGRPLDNKGEIETSE-RLPTERPARGIMERAP 148

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGER 198
           VE   +TGI+VID   P+  GQR  +     IGK+ +   ++  +       I   + +R
Sbjct: 149 VEVPLQTGIKVIDALIPVGRGQRELIVGDRQIGKTAIAVDTILNQKQHNVICIYCAIAQR 208

Query: 199 GREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           G  V + I+          +VVVVA  +  P L+ + P  A +I EYF  +G +VL+I D
Sbjct: 209 GAAVAKVIDRLRQHQAMDYTVVVVAPGESPPGLKYITPYAATSIGEYFRDQGRDVLIIYD 268

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLV 315
            +T+ A + RE++      P    YP  +F    RLLER      E   G++TA+  V  
Sbjct: 269 DLTQHAWAYRELSLLLRRPPGREAYPGDIFYIHSRLLERATHLRDELGGGSLTALPLVET 328

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              N +  I  ++ SI DG I L+ +L ++G  P VD   SVSR+  K      +++ S 
Sbjct: 329 QAQNISAYIPTNLISITDGQIYLSPNLFQQGILPAVDVGKSVSRVGGKTQLPAYRRVSSD 388

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           L     +F+E       G     +D      + +   + + LKQ  S
Sbjct: 389 LRLSYSQFQEVEVFARFG---TRLDEQTRHTLERGRRVREVLKQKES 432


>gi|153805610|ref|YP_001382193.1| ATP synthase CF1 beta subunit [Leptosira terrestris]
 gi|190358675|sp|A6YGB6|ATPB_LEPTE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134270141|gb|ABO69330.1| CF1 beta subunit of ATP synthase [Leptosira terrestris]
          Length = 482

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVV----HQGKNSDNLGQVIRINLDI-VYICPVG 76
           G I+ I      +T  +  V       VV      G       +V ++  D  V    + 
Sbjct: 11  GRITQIIGPVLDITFSAGKVPNIYNALVVTGKTPSGDEIRVTCEVQQLLGDNCVRAVSMN 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D   ++G     + I    P  
Sbjct: 71  ATDGLMRGLEVIDTGTALTVPVGEATLGRIFNVLGETVDNLGTVG-NKQGLPIHRPAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 VDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESKVINAENLSESKVALVYGQMNEPPGARMRVALTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ERI  +  +
Sbjct: 250 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              S +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 WIVSKEHYECAQNVKQTLQRYKELQDIIAILGLDELAEED-RLLVARARKIERFLSQP 424


>gi|20467397|gb|AAL27829.1| ATPase beta subunit [Pinus strobus]
          Length = 442

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 27  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMTVIDTGAPLSVPVGGATLGRIFNVLG 86

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 87  EPVDNLGPVD-ARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 145

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 146 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 205

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 206 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 265

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 266 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 323

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 324 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 383

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 384 LSEED-RLIVARARKIERFLSQP 405


>gi|62085223|gb|AAX63014.1| ATP synthase beta subunit [Euonymus alatus]
          Length = 470

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 5   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 64

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    +       GR+ N LG+P+D    +     S+ I    P  
Sbjct: 65  ATEGLMRGMDVIDTGAPLSVPVGVATLGRIFNVLGEPVDNLGPVDTRTTSL-IHKSAPAF 123

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 124 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 183

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 184 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 243

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 244 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 301

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 302 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 361

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|15645746|ref|NP_207923.1| F0F1 ATP synthase subunit beta [Helicobacter pylori 26695]
 gi|2493023|sp|P55988|ATPB_HELPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2314283|gb|AAD08174.1| ATP synthase F1, subunit beta (atpD) [Helicobacter pylori 26695]
          Length = 469

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    ++   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQVIKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 VATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 410


>gi|302670522|ref|YP_003830482.1| ATP synthase F1 alpha subunit AtpA2 [Butyrivibrio proteoclasticus
           B316]
 gi|302394995|gb|ADL33900.1| ATP synthase F1 alpha subunit AtpA2 [Butyrivibrio proteoclasticus
           B316]
          Length = 604

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 104/427 (24%), Positives = 179/427 (41%), Gaps = 15/427 (3%)

Query: 3   KNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           K +  L+   E++   +   + G +  +      +  + ++   G+ +  +       G 
Sbjct: 95  KIISMLSDKVENFDLAVEDKEVGSVVWVGDGIANIDGI-EHAFYGEIIEFEDGTK---GM 150

Query: 62  VIRINLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120
              I  D +     G    I  G   V  +    I     + GRVI+ALG PIDG   + 
Sbjct: 151 AQDIRDDHIGCILFGNDAGIRQGTRAVRTYKEAGIPVGEAFIGRVIDALGAPIDGQGDI- 209

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           K      +    P  ++RQ V +  +TGI  ID   P+  GQR  +      GK+++   
Sbjct: 210 KESGYRPVEGPAPGIIDRQSVNEPMETGILSIDTMFPIGRGQRELIIGDRQTGKTSIALD 269

Query: 181 FARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
              +        I   VG++   V + I+          ++VV +T+ +S  L+ +AP +
Sbjct: 270 TIINQKGKDVICIYVAVGQKASTVAKIIQILKKTGAMDYTIVVSSTASDSAPLQYIAPYS 329

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              +AEYF  +G +VL++ D +++ A + R ++      P    YP  VF    RLLER 
Sbjct: 330 GTAMAEYFMHEGKDVLIVYDDLSKHAVAYRALSLLLERSPGREAYPGDVFYLHSRLLERS 389

Query: 298 GP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
               SE   G+ITA+  +     + +  I  +V SI DG I L   L  EG  P V+   
Sbjct: 390 SKLSSELGGGSITALPIIETLAGDVSAYIPTNVISITDGQIFLESDLFFEGMRPAVNVGL 449

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A +   KK   S+   + ++ E   + +   +   +D      +    ++ +
Sbjct: 450 SVSRVGSAAQTKAMKKAAGSIRVDLAQYRE---MAVFTQFSSDLDETTKNQLAHGNVLME 506

Query: 416 FLKQSPS 422
            LKQ   
Sbjct: 507 LLKQPLE 513


>gi|160938925|ref|ZP_02086276.1| hypothetical protein CLOBOL_03819 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437888|gb|EDP15648.1| hypothetical protein CLOBOL_03819 [Clostridium bolteae ATCC
           BAA-613]
          Length = 466

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 192/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V      +  + D +V   +    + +V   +  ++V    +   + +
Sbjct: 4   GKIIQVMGPVVDVAFEDDGLPHIKDALVVDNQGKKCVMEVAQHVGGNVVRCIMLASSDGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ IDG +SL +G+    I    P   ++  
Sbjct: 64  CKDMEVEPTGAGIQVPVGEKTLGRLFNVLGETIDGGESL-EGEDKWVIHRDPPSFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 VVEMLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELITNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWTEMRESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDVEHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEVGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR L +     +  ++ +
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEEDVVGKEHYEVAN 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 KVQQMLQKYKELQDIIAILGMEELSEDD-KLTVNRARKIQRFLSQP 405


>gi|89242530|gb|ABD64623.1| ATPase beta subunit [Siparuna brasiliensis]
          Length = 436

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIS 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   +  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKMERFLSQP 387


>gi|28188325|gb|AAL92542.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 402

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|145218847|ref|YP_001129556.1| F0F1 ATP synthase subunit beta [Prosthecochloris vibrioformis DSM
           265]
 gi|189081338|sp|A4SC45|ATPB_PROVI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|145205011|gb|ABP36054.1| ATP synthase F1 subcomplex beta subunit [Chlorobium phaeovibrioides
           DSM 265]
          Length = 462

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 112/412 (27%), Positives = 189/412 (45%), Gaps = 18/412 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     Q   + D +     +   +  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGQLPAILDALSIAKPDGTKI--VLETQQHLGEERVRTVAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + GR  +        GR++N +G PIDG   +     +  I    P 
Sbjct: 59  ESTDGLIRGMAVENTGRPIQAPVGEGVLGRMLNVVGDPIDGRGPVD-AKKTYSIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVI 191
             +     + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +         +
Sbjct: 118 FEDLSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-G 249
            + VGER RE  +   + +    + K+ +V    +E P  R    LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEN 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI  +  + G++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRI--TSTKNGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 ++  ++ R+++ +DI  I G     D      V +   +  FL Q 
Sbjct: 356 HYDTAQAVKMILQRYKDLQDIIAILGMDELSDED-KLVVSRARKVQRFLSQP 406


>gi|256380131|ref|YP_003103791.1| F0F1 ATP synthase subunit alpha [Actinosynnema mirum DSM 43827]
 gi|255924434|gb|ACU39945.1| ATP synthase F1, alpha subunit [Actinosynnema mirum DSM 43827]
          Length = 548

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 94/435 (21%), Positives = 171/435 (39%), Gaps = 27/435 (6%)

Query: 6   ETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +    E Y  +   +      G ++        V  L       + +   G     LG
Sbjct: 9   DEIRSAIEKYVSSYSPEVNREEVGVVAETYDGIAIVEGL-PGTMTNELLEFPGG---VLG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + + +  +    +G  ++I  G  V   G+   +     + GRV+N LG+PIDG   +
Sbjct: 65  VALNLEVREIGAVILGDFDKIEEGQEVKRTGQVLSVPVGDGFLGRVVNPLGQPIDGLGDI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              D +  +  +    + RQ V +  +TGI+ ID  TP+  GQR  +      GK+ +  
Sbjct: 125 VADD-NRALELQAATVLQRQPVGEPMQTGIKAIDSMTPIGRGQRQLIIGDRKTGKTAVCI 183

Query: 180 MFARSDCF----------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
               +              + +   +G++G  +             + + +V A + +S 
Sbjct: 184 DTIINQKKAWESGDPQQQVRCVYVAIGQKGSTIAGVKSALEEAGALEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL+I D +T+ A + R I+      P    YP  VF 
Sbjct: 244 GFKWLAPYTGSAIGQHWMYEGKHVLIIFDDLTKQAEAYRAISLLLRRPPGREAYPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      +   G++T +  +    ++ +  I  +V SI DG   L   L   G
Sbjct: 304 LHSRLLERCAKLSDDLGGGSMTGLPIIETKANDVSAYIPTNVISITDGQCFLESDLFNAG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
             P V+   SVSR+   A +   K +  SL   + +F E         +   +D      
Sbjct: 364 VRPAVNVGISVSRVGGAAQTKAMKTVSGSLRLDLSQFRELE---AFSAFASDLDAASRAQ 420

Query: 407 VHQVPIIYDFLKQSP 421
           + +   + + LKQ  
Sbjct: 421 LDRGARLVELLKQGQ 435


>gi|12004153|gb|AAG43916.1|AF213785_1 ATP synthase beta subunit [Primula palinuri]
          Length = 444

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 9   KGRDTAGQPINVTCEVPQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 68

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 69  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTELSIFETGIKVVDLLAPYRRGGKI 127

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV---REFIEDYLGDN-------- 213
           G+F G+G+GK+ L+             +S+ G  G       +   +             
Sbjct: 128 GLFGGAGVGKTVLIMELINXIAKAHGGVSVFGGVGERTGEGNDLYMEMKESGVINEENIA 187

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 188 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 247

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 248 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 305

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 306 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIA 365

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 366 ILGLDELSEED-RLTVARARKIERFLSQP 393


>gi|315923929|ref|ZP_07920157.1| ATP synthase F1 sector beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622769|gb|EFV02722.1| ATP synthase F1 sector beta subunit [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 469

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 113/406 (27%), Positives = 189/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR--INLDIVYICPVGIGEEI 81
           G I+ +      V      +      +    N  +    +   I  + V    +   E +
Sbjct: 4   GKITQVMGSVIDVAFAGGKLPAVKNALVADYNDRHYTMEVSQHIGDNTVRCILLDAAEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V   G+   +       GR+ N  G P+DG D L +     EI  + P   ++  
Sbjct: 64  ARGIDVADTGKSIDVPVGEAVLGRLFNVTGGPLDGGDPLTEAP-RWEIHREPPKFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 AVEMLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R + P T +T+AEYF  +   NVLL 
Sbjct: 183 RSREGNDLYTEMRESGVLEKTALVFGQMNEPPGSRMLVPETGLTMAEYFRDEKHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +    G+IT+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLANEMGQLQERI--TSTRNGSITSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  +   
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYQTAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D      V++   I  FL Q 
Sbjct: 361 RVQAILQKYQELQDIIAILGMEELSDED-KLTVNRARKIQRFLSQP 405


>gi|222446757|gb|ACM51416.1| ATP synthase CF1 beta subunit [Caulerpa filiformis]
          Length = 453

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 192/418 (45%), Gaps = 20/418 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVG 76
           + +  G I+ I      V+ L  Q   + + ++ QG  ++ + +V ++  D  V    + 
Sbjct: 1   MSLNKGQITQIIGPVLDVSFLPGQMPNIFNALIVQGGETEVVCEVQQLLGDHCVRAVSMS 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G +V   G+   +       GR+ N L +P+D    +        I  + P  
Sbjct: 61  ATDGLTRGMVVIDTGKPINVPVGKTTLGRIFNVLREPVDNLGDVSDSK-RSSIHREAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++ +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 VDLETTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE+
Sbjct: 180 GGVGERTREGNDLYMEMKESKVIDEQNLSESKVTLVYGQMNEPPGARMRVALTALTLAEF 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F   +  +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ERI  +  +
Sbjct: 240 FRDVQKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ ++ V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 DGSITSIQAIYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 357

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +E      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 WIVGEEHYNCAQNVQQTLQRYKELQDIIAILGLDELSEQD-RLTVARARKIERFLSQP 414


>gi|126343750|ref|XP_001364069.1| PREDICTED: similar to ATP synthase subunit beta, mitochondrial
           [Monodelphis domestica]
          Length = 525

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 187/410 (45%), Gaps = 18/410 (4%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISL 83
            I ++      V        + + +  QG+++  + +V   +    V    +   E +  
Sbjct: 59  RIVAVIGAVVDVQFDEGLPPILNALEVQGRDTRLVLEVAQHLGESTVRTIAMDGTEGLVR 118

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G   +I       GR++N +G+PID    + K      I ++ P  M     +
Sbjct: 119 GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFMEMSVEQ 177

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERG 199
           +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER 
Sbjct: 178 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 237

Query: 200 REVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
           RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +
Sbjct: 238 REGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQD 297

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V 
Sbjct: 298 VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQ 355

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +  
Sbjct: 356 AIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHY 415

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 416 DVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 464


>gi|119944246|ref|YP_941926.1| F0F1 ATP synthase subunit alpha [Psychromonas ingrahamii 37]
 gi|190358146|sp|A1SS62|ATPA1_PSYIN RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|119862850|gb|ABM02327.1| ATP synthase F1, alpha subunit [Psychromonas ingrahamii 37]
          Length = 519

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 184/426 (43%), Gaps = 15/426 (3%)

Query: 4   NLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           +   LA     +   L   + G ISS++     V+ L+      + +   G   D  G  
Sbjct: 11  SFAALAASRTTFRAQLKAREIGIISSVSFGVAQVSGLANVASE-EVLKFSG---DIYGIA 66

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGK 121
             ++ D + +  +G   ++  GD V   GR           GRVI+ LG+P+D    +  
Sbjct: 67  FNVDQDSIGVVLLGDYWQLQSGDEVERTGRVMDVAVGLGLLGRVIDPLGRPLDDKGPIES 126

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--S 179
            +  + +     P M+R  V    +TG++VID   P+  GQR  +      GK+T+   +
Sbjct: 127 SE-RLPVERPAAPIMDRAPVTVPLQTGLKVIDALIPIGRGQRELILGDRQTGKTTIAIDT 185

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTA 238
           +  + D     +   +G+R   V + I           ++V+V+  +  P    +AP  A
Sbjct: 186 ILNQHDQNVLCVYCAIGQRASAVAKTIAILKAKGALDYTLVMVSEGNAPPGFAYIAPYAA 245

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +IAEYF  KG +VL++ D +T+ A + RE++      P    +P  +F    RLLER  
Sbjct: 246 TSIAEYFMEKGRDVLIVYDDLTQHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERAT 305

Query: 299 --PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
                 + G++TA+  +  +  N +  I  ++ SI DG I L+ +L E G  P VD   S
Sbjct: 306 CLKQRHKGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPTLFELGILPAVDVGRS 365

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           VSR+  KA     + + ++L     +FEE       G     +D      +     I   
Sbjct: 366 VSRVGGKAQRPMYRAVAANLKLTYAQFEELETFARFG---ARLDQNSQDIITNGRRIRAS 422

Query: 417 LKQSPS 422
           LKQ  S
Sbjct: 423 LKQPQS 428


>gi|268575600|ref|XP_002642779.1| C. briggsae CBR-ATP-2 protein [Caenorhabditis briggsae]
 gi|187022807|emb|CAP38046.1| CBR-ATP-2 protein [Caenorhabditis briggsae AF16]
          Length = 537

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 104/413 (25%), Positives = 185/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I ++      V        + + +   G++   + +V   +  ++V    +   E 
Sbjct: 68  ASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEG 127

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   +I       GR++N +G+PID    +   + +  I ++ P  +   
Sbjct: 128 LVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIPSKNFA-PIHAEAPEFVEMS 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 187 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 246

Query: 197 ERGREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +            K  +V    +E P  R    LT +T+AEYF  + 
Sbjct: 247 ERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQE 306

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT
Sbjct: 307 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTKKGSIT 364

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VL+R +AE   YP VDPL S SR+ D      
Sbjct: 365 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNIVGQ 424

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 425 NHYDIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQKFLSQP 476


>gi|330889058|gb|EGH21719.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 407

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 146/386 (37%), Positives = 213/386 (55%), Gaps = 13/386 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
           V  G +  +  +      L     +G   V    +S    +   +V+  +   V++ PVG
Sbjct: 26  VVEGRLLRMVGLTLEAEGL--RAAMGSRCVVINDDSHHPVEVEAEVMGFSGGKVFLMPVG 83

Query: 77  IGEEISLGDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               I+ G  V      GR          GRV++  G+P+DG   + K +  + +     
Sbjct: 84  SVAGIAPGARVVPLADTGRL--PMGMSMLGRVLDGAGRPLDGRSPI-KAEDWVPMDGPTI 140

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + R  + +    GIR I+    +  GQR+G+FAG+G+GKS LL M  R    D +++ 
Sbjct: 141 NPLKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVG 200

Query: 194 LVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREV+EFI      + LK+SVVV + +D++P++R  A +    IAEYF  KG NV
Sbjct: 201 LIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNV 260

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL++DS+TRFA + REI    GE P  +GYP SVF+ LP+L+ER G +E   G+ITA  +
Sbjct: 261 LLLMDSLTRFAQAQREIPLAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYT 320

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL +GD+  DPIADS R +LDGHIVL+R LAEEG YP +D  AS+SR+     S +    
Sbjct: 321 VLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMAR 380

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPG 398
                 L  R+++TRD+  +G Y  G
Sbjct: 381 AQHFKQLWSRYQQTRDLISVGAYVAG 406


>gi|296111398|ref|YP_003621780.1| ATP synthase subunit B [Leuconostoc kimchii IMSNU 11154]
 gi|295832930|gb|ADG40811.1| ATP synthase subunit B [Leuconostoc kimchii IMSNU 11154]
          Length = 466

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 108/392 (27%), Positives = 182/392 (46%), Gaps = 14/392 (3%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           + +G+      +V + +   +V    +   + +  G  V   G    +       GRV N
Sbjct: 33  IDKGEGQTLTVEVSLALGDGVVRTIAMDSTDGLQRGMSVTDTGDAITVPVGESTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+P+D + ++        I  + P         +  +TGI+VID+  P   G +IG+F
Sbjct: 93  VLGEPVDNNGAIADDTPRNSIHREAPKYDELASSTEILETGIKVIDLLAPYVRGGKIGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK-SVVVVAT 223
            G+G+GK+ L+     +       IS+   VGER RE  +   +     + K + +V   
Sbjct: 153 GGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMEESGVLKQTAMVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AE F      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L R+L
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERAL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D      +  ++ + +   + R+ E +DI  I G     D 
Sbjct: 331 TQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDIISILGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                V++   I  FL Q     S  + F  I
Sbjct: 391 E-KTTVNRARRIQFFLSQP---FSVAETFTGI 418


>gi|62902829|gb|AAY19329.1| ATP synthase beta subunit [Parnassia trinervis]
          Length = 474

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 6   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTAGQQINVVCEVQQLLGNNXVRAVAMS 65

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 66  ATDGLTRGMEVIDTGVPLNVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 125 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 184

Query: 196 G---ERGREVREFIEDYLGDNLKKSVVV--------VATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +     +     +            +E P  R    L A+T AEY
Sbjct: 185 GGVGERTREGNDLYXEMKESGVINEQNIXXSXVALAYGQMNEPPGARMRVGLXALTXAEY 244

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 245 FRDVNEQDVLLXIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 302

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 303 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 362

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|157678799|dbj|BAF80640.1| ATP synthase CF1 alpha chain [Isochrysis galbana]
          Length = 357

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 157/361 (43%), Gaps = 11/361 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            +  L Q V  G+ +  Q      +G  + +  D V    +G G  I  G  V   G+  
Sbjct: 1   RIYGLDQ-VMAGELLEFQ---DSTIGIALNLENDNVGAVLMGPGLGILEGSAVRSTGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I     + GRV+N+L KPIDG   +   +  + + S  P  + R+ V +  +TGI  ID
Sbjct: 57  QIPVGEGFLGRVVNSLAKPIDGKGDISSTETRL-VESMAPGIITRKSVCEPVQTGITAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +   D    +   +G++   V   +     
Sbjct: 116 AMIPIGRGQRELIIGDRQTGKTSVAIDTIINQKTDDVICVYVAIGQKASSVASVVTTLEE 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 +++V A +DE   L+ +AP T   +AEYF  KG   +++ D +T+ A + R+++
Sbjct: 176 KGALGYTIIVAANADEPATLQYIAPYTGAALAEYFMYKGKATVIVYDDLTKQASAYRQMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER          G++TA+  +     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSMTALPIIETQAGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  L   G  P ++   SVSR+   A +   K++   L   + +F E   
Sbjct: 296 ISITDGQIFLSGDLFNAGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFAELEA 355

Query: 389 I 389
            
Sbjct: 356 F 356


>gi|187478207|ref|YP_786231.1| flagellum-specific ATP synthase [Bordetella avium 197N]
 gi|115422793|emb|CAJ49321.1| flagellum-specific ATP synthase [Bordetella avium 197N]
          Length = 479

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 155/454 (34%), Positives = 234/454 (51%), Gaps = 30/454 (6%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S    +  G I+  T +    T L   V     + + +G +     +V+  +   +
Sbjct: 18  IRAASTEPALSTGRITRATGLVLHATGLRLPVGAACRIEIARGHDLWADAEVVGFDGQTL 77

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 78  YLMPQADISGLPPGARVMPAEPVVQRSVPLPRKAELNGNAKPQLGRHLPVGNALLGRVVD 137

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+D    L   +L+  + ++    ++R  ++     G+R I+    +  GQR+G+F
Sbjct: 138 GAGRPLDDLGPLTGAELA-PLAAQPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLF 196

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D 
Sbjct: 197 AGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADV 256

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+LR      A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SV
Sbjct: 257 SPLLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSV 316

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G          G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R+L
Sbjct: 317 FAKLPMLVERTGMGAPGPNGRAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRTL 376

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      +  +  LV     ++ R++  RD+  +G Y PG D  
Sbjct: 377 AEAGHYPAIDIEASISRAMTSLITPQQFNLVRRFKQMLSRYQRNRDLISVGAYVPGADPQ 436

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
           LD+A+ + P +  FL+Q   +  S     EI + 
Sbjct: 437 LDEAIARYPRLEAFLQQEIGENISYGDAVEILRA 470


>gi|113197032|gb|AAQ74595.2| F1-ATPase alpha subunit [Rhipogonum discolor]
          Length = 417

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 86/412 (20%), Positives = 159/412 (38%), Gaps = 23/412 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+        S   G  + +  + V I        I  GDLV
Sbjct: 1   SVGDGIARVYGLNE-IQAGELXEFA---SGVKGXALNLEXENVGIVVFVSDTAIKEGDLV 56

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G            GRV++A    IDG  +L   +    +  K P  + R+ V +  +
Sbjct: 57  KRTGSIVDVXAGKAMLGRVVDAXXVXIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQ 115

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
           TG++ +D   P+  GQR  +      GK+ +      +                 +   +
Sbjct: 116 TGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAI 175

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 176 GQKRSTVAQLVQILSEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 235

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 236 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 295

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 296 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 355

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             S    + ++ E   +     +   +D       ++   + +  KQ   + 
Sbjct: 356 RGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQYEP 404


>gi|34539453|gb|AAQ74610.1| F1-ATPase alpha subunit [Tapeinochilos sp. L-86.0039]
          Length = 364

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 152/371 (40%), Gaps = 20/371 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGYMVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL- 214
            +      GK+ +      +               +   +G++   V + ++     N  
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQKRSTVAQLVQILPEANAL 176

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++    
Sbjct: 177 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 236

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I 
Sbjct: 237 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPIT 296

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I     L   G  P ++   SVSR+   A     K++  S    + ++ E   +   
Sbjct: 297 DGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAF 353

Query: 393 GGYRPGVDLIL 403
             +   +D   
Sbjct: 354 AQFGSDLDAAT 364


>gi|208435029|ref|YP_002266695.1| ATP synthase F1, subunit beta [Helicobacter pylori G27]
 gi|226740208|sp|B5Z8D0|ATPB_HELPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2197129|gb|AAB61298.1| F1F0-ATPase beta subunit [Helicobacter pylori]
 gi|208432958|gb|ACI27829.1| ATP synthase F1, subunit beta [Helicobacter pylori G27]
          Length = 469

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 410


>gi|156622735|dbj|BAF76348.1| ATP synthase beta subunit [Magnolia praecocissima]
          Length = 488

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYXELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|124361724|gb|ABN09304.1| ATP synthase beta subunit [Diospyros pseudomespilus]
          Length = 458

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQSINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G      G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLMRGMETIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|113910892|gb|ABI48178.1| ATPase beta subunit [Weymouthia cochlearifolia]
          Length = 456

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 104/394 (26%), Positives = 173/394 (43%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           ++ +G+N+   GQ I +  ++        V    +   + +  G  V   G    +    
Sbjct: 9   LIVEGQNTA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGE 66

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+ +D    +     +  I    P           F+TGI+V+D+  P  
Sbjct: 67  ATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 125

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVID 185

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 186 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 245

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             +  D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 304 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 363

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|21633335|gb|AAM52142.1| ATP synthase beta subunit [Polymeria pusilla]
          Length = 490

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG+++   +   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDTEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  NGLMRGMGVIDTGAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIXILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|17224788|gb|AAL37115.1| ATP synthase beta subunit [Aletris farinosa]
          Length = 468

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNFGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLG 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|12004121|gb|AAG43900.1|AF213769_1 ATP synthase beta subunit [Cortusa turkestanica]
          Length = 487

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRRMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLHMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|285018177|ref|YP_003375888.1| flagellum-specific ATP synthase [Xanthomonas albilineans GPE PC73]
 gi|283473395|emb|CBA15900.1| probable flagellum-specific atp synthase protein [Xanthomonas
           albilineans]
          Length = 458

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 143/410 (34%), Positives = 224/410 (54%), Gaps = 3/410 (0%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
            +V  T+  +     +G     +        +V+  + +   + P      +     V  
Sbjct: 45  RAVGLTLEAVGCEAPMGAICRVEVDGGWVDAEVVGFSGERTSLMPSAETHGLLPNARVVP 104

Query: 90  WGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
             R   +       GRVI++ G P+DG   + + + S+ +       + R+ +      G
Sbjct: 105 LHRRGGVEVGEGLLGRVIDSDGVPLDGKGPI-RAEGSVGMAGVSINPLAREPITTPLDVG 163

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-E 207
           +R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+  
Sbjct: 164 VRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRYTAADIIVVGLIGERGREVRDFVET 223

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               + L+++VVV A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + R
Sbjct: 224 TLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQR 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+
Sbjct: 284 EIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADA 343

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +  + +L  L+  +   R
Sbjct: 344 ARAILDGHILLSRRVADSGLYPAIDIESSVSRVVQDIADEPWRLRIRALKRLVSAYSSNR 403

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           D+  IG Y+ G D  +D+A+ + P I +FL Q  +  +     Q+  K+L
Sbjct: 404 DLITIGAYQRGNDPAVDEALERWPEIMEFLGQDVAKAADLPHSQDALKRL 453


>gi|157285187|gb|ABV31333.1| ATPase [Vibrio neonatus]
          Length = 415

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 170/407 (41%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---KYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPINAA-LTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDTTKKQLDHGAKVTELMKQKQ 399


>gi|113910896|gb|ABI48180.1| ATPase beta subunit [Anomodon attenuatus]
          Length = 465

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 SRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q   
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQPSF 414


>gi|323715452|gb|ADY04794.1| ATP synthase beta subunit [Hydrostachys insignis]
          Length = 485

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V QG+++         +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVQGRDNACQPISVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G   ++       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMEVIDMGAPLKVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINENNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|295098944|emb|CBK88033.1| ATP synthase F1 subcomplex beta subunit [Eubacterium cylindroides
           T2-87]
          Length = 467

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 189/409 (46%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
           G +  I      ++    ++   D +    + +      + +V   I  D V    +G  
Sbjct: 6   GKVVQIIGPVVDISFDEDHLP--DLLTAIEIKRPDEESLIVEVAQGIGADRVRCIAMGST 63

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G+  +        GR+ N LG+PIDG   +   +    I    P    
Sbjct: 64  DGLVRGMDAIDTGKPIQAPVGDAILGRMFNVLGRPIDGLGEVKDVEYE-PIHRPAPAFDE 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
           +  V    +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+V  
Sbjct: 123 QSTVSVPLETGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVVG 182

Query: 197 --ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             ER RE  +   +     +  K+V+V    +ESP  R    LT +T+AE+F   +  +V
Sbjct: 183 VGERTREGNDMYHEMKESGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEHFRDKEHQDV 242

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +    G+IT+V +
Sbjct: 243 LLFIDNIFRFTQAGSEVSALLGRVPSAVGYQPTLATEMGQLQERI--TSTNDGSITSVQA 300

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           + V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ D     +    
Sbjct: 301 IYVPADDLTDPAPATAFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGERHYN 360

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +    K V++   + +FL Q 
Sbjct: 361 VARGVQSILQRYKELQDIIAILGMDELSEED-KKVVNRARRVRNFLSQP 408


>gi|123325665|gb|ABM74457.1| ATP synthase beta subunit [Citrus japonica]
          Length = 466

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTXS-PIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|89242550|gb|ABD64633.1| ATPase beta subunit [Hydrocharis morsus-ranae]
          Length = 436

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTLGQQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLESTSTMLQPRIVGEEHYEIAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   +  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKMERFLSQP 387


>gi|17224790|gb|AAL37116.1| ATP synthase beta subunit [Metanarthecium luteo-viride]
          Length = 471

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 27  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 86

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 87  IFNVLGEPVDNFGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 145

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 146 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLA 205

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 206 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 265

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 266 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 323

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 324 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 383

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 384 ILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|29726138|gb|AAD00595.2| ATP synthase beta subunit [Papaver orientale]
          Length = 491

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V+    +   + + +V +G+N+D  G++I +  ++        V    
Sbjct: 14  GRVAQIIGPVLDVSFPPGKMPNIYNALVVKGRNTD--GELINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLKRGMEVIDTGAALSVPVGGATLGRIXNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPXAVGYQPTLSTEMGXLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVXADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|4206586|gb|AAD11724.1| ATP synthase beta subunit [Aegle marmelos]
          Length = 477

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 7   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 66

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 67  ATEGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 125

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 126 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 185

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 186 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 245

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 246 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 304 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 363

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|291333878|gb|ADD93559.1| sodium transporting two sector ATPase [uncultured marine bacterium
           MedDCM-OCT-S04-C293]
          Length = 514

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 95/445 (21%), Positives = 187/445 (42%), Gaps = 30/445 (6%)

Query: 4   NLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           N   ++++ +    +L         G I  ++     V  LS     G+ +  +G  S  
Sbjct: 5   NPSEISEIIKGRIDSLETSTTESNEGTIVFLSDGIARVHGLSD-AMYGELIEFEGGVS-- 61

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
            G  + +  D V +   G  ++++ G +    G+   +       GRV++ALG PIDG  
Sbjct: 62  -GMALNLERDSVGVVIFGDYKQLAEGGVAKCTGKILEVPVGPELVGRVVDALGNPIDGKG 120

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            + K  L+  +    P  M R+ V++  + G++ +D   P+  GQR  +      GK+ +
Sbjct: 121 PI-KTKLTAPVEKVAPGVMTRKPVDEPVQIGLKAVDSMVPIGRGQRELIIGDRQTGKTAI 179

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMA 234
              ++  +       +   VG++   +   +         + +++V A + +   ++ +A
Sbjct: 180 ALDAIINQKGTGVTCVYVAVGQKQSSIAAVVRKLEEYGAMEHTIIVAAAAADPAPMQFLA 239

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +  ++ EYF  KG++ L+I D +++ A + R+I+      P    YP  +F    RLL
Sbjct: 240 PYSGCSMGEYFRDKGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDIFYLHSRLL 299

Query: 295 ERI-------------GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER              G  + + G++TA+  +     + +  +  +V SI DG I L  S
Sbjct: 300 ERGCRVNEDYVEEQTEGKVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETS 359

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
              +G  P ++P  SVSR+   A +   KKL   +   + +F E         +   +D 
Sbjct: 360 YFNKGLLPAMNPGISVSRVGGAAQTPLIKKLGGGVRIALAQFRELE---AFAQFASDLDD 416

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426
              + +     + + +KQ      S
Sbjct: 417 ASREQLELGQKVTELMKQKQYSPMS 441


>gi|157285119|gb|ABV31299.1| ATPase [Vibrio ordalii]
 gi|157285245|gb|ABV31362.1| ATPase [Vibrio ordalii]
          Length = 441

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +      S      + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELP---SGRYALALNLERDSVGAVVMGPYADLKEGMKVIGSG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGQPIDGKGPI-EAKLSSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E         +   +D    + ++    + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYREL---AAFAQFSSDLDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|224830594|gb|ACN66392.1| ATP synthase beta chain [Tinospora smilacina]
          Length = 471

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 67  MSATDGLMRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|157285089|gb|ABV31284.1| ATPase [Vibrio scophthalmi]
 gi|157285237|gb|ABV31358.1| ATPase [Vibrio scophthalmi]
          Length = 411

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPFADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|62902853|gb|AAY19341.1| ATP synthase beta subunit [Casearia javitensis]
          Length = 448

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 14  KGRDTIGQQIXVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVXGATLGR 73

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 74  IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 132

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 133 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 192

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 193 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 252

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 253 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 310

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 311 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 370

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   +  FL Q 
Sbjct: 371 ILGLDELSEED-RLTVARARKMERFLSQP 398


>gi|23503621|dbj|BAC20407.1| ATP synthase beta-subunit [Carteria cerasiformis]
          Length = 376

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 162/362 (44%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G    +       GR+ N LG+P+D    +   + ++ I   
Sbjct: 1   VAMQPTEGLMRGMEVLDTGNPLTVPVGKVTLGRIFNVLGEPVDNMGPVETQE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGSLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  S LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRGLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +        +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQKVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|295394658|ref|ZP_06804877.1| ATP synthase F1 sector alpha subunit [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294972551|gb|EFG48407.1| ATP synthase F1 sector alpha subunit [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 544

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 89/439 (20%), Positives = 177/439 (40%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           E L +  E Y+       + G + +       V+ L       + +  +      LG   
Sbjct: 13  EALGKFVESYTPGSADKTEVGKVVTAGDGIAQVSGL-PGTMANELLRFEDG---TLGLAQ 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            ++   + +  +G    I+    V+  G    I     + GRV++ LG P+DG   + + 
Sbjct: 69  NLDEREIGVVILGEFAGIAEEQNVYRTGEVLSIPVGDGYLGRVVDPLGNPVDGLGEI-ES 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
           +   E+  +    M+R+ V++  +TG++ ID   P+  GQR  +      GK      T+
Sbjct: 128 EGRRELELQAAGVMDRKEVKEPLQTGLKSIDAMIPIGRGQRQLIIGDRKTGKTALALDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++  A  +  D     + I    G++G  +         +   + + +V + + +    +
Sbjct: 188 INQRANWESGDPKKQVRCIYVACGQKGSTIASVRRSLEENGALEYTTIVSSPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     I +++  +G +VL++ D +++ A + R I+      P    YP  VF    
Sbjct: 248 YLAPYAGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAISLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G++T +  +    ++    I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDELGGGSMTGLPIIETKANDVGAFIPTNVISITDGQIFLQSDLFNANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   + +  +L   + ++           +   +D    + + +
Sbjct: 368 AVDVGISVSRVGGSAQTKPLRGVSGTLKISLAQYRSLE---AFAMFASDLDAATKRQLDR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              + + LKQ   +  S +
Sbjct: 425 GARLTELLKQGQFEPMSAE 443


>gi|189314203|gb|ACD89001.1| ATP synthase beta subunit [Limacia blumei]
          Length = 468

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|157285021|gb|ABV31250.1| ATPase [Listonella anguillarum]
 gi|157285103|gb|ABV31291.1| ATPase [Listonella anguillarum]
 gi|289498351|gb|ADC99214.1| ATP synthase F1 alpha subunit [Vibrio ordalii]
 gi|289498363|gb|ADC99220.1| ATP synthase F1 alpha subunit [Vibrio ordalii]
 gi|289498365|gb|ADC99221.1| ATP synthase F1 alpha subunit [Vibrio ordalii]
 gi|289498367|gb|ADC99222.1| ATP synthase F1 alpha subunit [Vibrio ordalii]
          Length = 441

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +      S      + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELP---SGRYALALNLERDSVGAVVMGPYADLKEGMKVTGSG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGQPIDGKGPI-EAKLSSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    + ++    + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|17224747|gb|AAL37095.1| ATP synthase beta subunit [Trichopus sempervirens]
          Length = 476

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 178/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K+ D  GQ I +  ++        V   
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVV---KSRDTAGQQINVTCEVQQLLGNNPVXAV 59

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D          +  I    
Sbjct: 60  AMSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGP-ADTRTTSPIHRSA 118

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 119 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 178

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 179 SVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTM 238

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 239 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 296

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 297 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 356

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 357 LQPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 415

Query: 420 S 420
            
Sbjct: 416 P 416


>gi|217032681|ref|ZP_03438167.1| hypothetical protein HPB128_202g15 [Helicobacter pylori B128]
 gi|298735865|ref|YP_003728390.1| F-type H+-transporting ATPase beta chain [Helicobacter pylori B8]
 gi|216945611|gb|EEC24262.1| hypothetical protein HPB128_202g15 [Helicobacter pylori B128]
 gi|298355054|emb|CBI65926.1| F-type H+-transporting ATPase beta chain [Helicobacter pylori B8]
          Length = 466

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 3   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 63  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKTVERARKIEKFLSQP 407


>gi|221069295|ref|ZP_03545400.1| ATPase FliI/YscN [Comamonas testosteroni KF-1]
 gi|220714318|gb|EED69686.1| ATPase FliI/YscN [Comamonas testosteroni KF-1]
          Length = 462

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 159/463 (34%), Positives = 251/463 (54%), Gaps = 28/463 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDN 58
           M    + ++Q    Y++ + ++  G+++ +T +    + L   V +G    +HQ      
Sbjct: 1   MNAWQQFMSQARARYAEPVPLECQGHLTRLTGMVLEASGL--RVPVGAQCHIHQHGQEPV 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFH---------------------WGRFRISP 97
           L +V+    +  ++ P G  + +S G +V                        G  R+  
Sbjct: 59  LAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVAETEKVRQTVGVLRLPM 118

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
                GRV+++ G P+D   +L +G +   +      AM+R  V +   TG++ ++    
Sbjct: 119 GDGLLGRVVDSQGIPLDRGPAL-EGVVPEVLDRNPINAMDRDPVRESLDTGVKALNSLLT 177

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKK 216
           +  GQR+G+FAGSG+GKS LL M AR    D +++ L+GERGREV+EF+ED LG  +  +
Sbjct: 178 VGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGAQDRSR 237

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           +VVV A +D  P+LR      A  IAE+F  KG +VLL++DS+TR+A + REIA   GE 
Sbjct: 238 AVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEP 297

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P  +GYP S F++LP L+ER G      G+ITA  +VL +GD+  DPIAD+ R+ILDGH+
Sbjct: 298 PATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADAARAILDGHV 357

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           VL+R+LAE G YP +D   S SR+     S +  +L      +  R+++ RD+  +G Y 
Sbjct: 358 VLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKGRDLVQVGAYV 417

Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEITKKLQ 438
           PG D  LD+A+   P +  FL+QS  + SS       + + +Q
Sbjct: 418 PGSDPQLDEAIALQPAMTGFLQQSMFESSSMGQSLAGMAQAMQ 460


>gi|12004149|gb|AAG43914.1|AF213783_1 ATP synthase beta subunit [Omphalogramma delavayi]
          Length = 483

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIIQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTSGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R+++ +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIGGEEHYETGQRVKETLQRYKKLQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633415|gb|AAM52182.1| ATP synthase beta subunit [Jacquemontia blanchetii]
          Length = 488

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 181/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 19  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRTVAMSDT 78

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P    
Sbjct: 79  DGLMRGMDVIDMGAPISVPVGGSTLGRIFNVLGEPVDNLGPVDTXTTS-PIHRSAPAFTQ 137

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 138 LDTKLSIFVTGIKVVDLLAPYPRGGKIGLFGGAGVGKTVLIMELINNIAQAHGGVSVFGG 197

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 198 VGERTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 257

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 258 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 315

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 316 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 375

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 VGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|17224759|gb|AAL37101.1| ATP synthase beta subunit [Tacca chantieri]
          Length = 496

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 20  GRITQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLMRGMEVIDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVD-TRTTFPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 QPRIVGEEHYETAQRVKQTSQRYQELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|317014518|gb|ADU81954.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Gambia94/24]
          Length = 469

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQIVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHGKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKVVERARKIEKFLSQP 410


>gi|260886479|ref|ZP_05897742.1| ATP synthase F1, beta subunit [Selenomonas sputigena ATCC 35185]
 gi|330839673|ref|YP_004414253.1| ATP synthase subunit beta [Selenomonas sputigena ATCC 35185]
 gi|260863622|gb|EEX78122.1| ATP synthase F1, beta subunit [Selenomonas sputigena ATCC 35185]
 gi|329747437|gb|AEC00794.1| ATP synthase subunit beta [Selenomonas sputigena ATCC 35185]
          Length = 470

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 189/410 (46%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGK----NSDNLGQVIRINLDIV-YICPVGI 77
           G +  +      +     +   + + +  QGK    + D + +V++   D V     +  
Sbjct: 4   GKVVQVIGPVVDIEFSAGELPAILNAITIQGKVEDLDIDLVVEVMQHLGDSVTRCIAMSS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G   ++       GRV N LG+ +D + +      S  I    P   
Sbjct: 64  TDGLMRGMEAEDTGAPIKVPVGDACLGRVFNVLGRTVDHNPAPVGNKESWPIHRPAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            ++   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 EQETSTQILETGIKVVDLIAPYSRGGKIGLFGGAGVGKTVLIMELIHNIATEHGGYSVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF      +
Sbjct: 184 GVGERTREGNDLWSEMTESGVIDKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V 
Sbjct: 244 VLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D  
Sbjct: 302 AVYVPADDLTDPAPAATFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGEDHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 EVARGVQAVLQKYKELQDIIAILGMEELSDED-KLTVARARKIQRFLSQP 410


>gi|21684881|emb|CAD11567.1| ATP synthase beta subunit [Coleochloa abyssinica]
          Length = 480

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +G+ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTMGEQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+PID    +     S  I    P
Sbjct: 67  MSATDGLTRGMEVIDTGAALSVPVGGTTLGRIFNVLGEPIDDLGPVDTSTTS-PIHRPAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFVELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYIEMKESGVINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V PL S S + 
Sbjct: 304 TKKGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTML 363

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPNIVGDEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|315221776|ref|ZP_07863690.1| ATP synthase F1, beta subunit [Streptococcus anginosus F0211]
 gi|319939415|ref|ZP_08013775.1| ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV]
 gi|315189162|gb|EFU22863.1| ATP synthase F1, beta subunit [Streptococcus anginosus F0211]
 gi|319811401|gb|EFW07696.1| ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV]
          Length = 468

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 114/413 (27%), Positives = 192/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID +   G+      I  K P
Sbjct: 61  MESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFGEDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALAPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQFFLSQN 410


>gi|289209746|ref|YP_003461812.1| ATP synthase F1 subunit beta [Thioalkalivibrio sp. K90mix]
 gi|288945377|gb|ADC73076.1| ATP synthase F1, beta subunit [Thioalkalivibrio sp. K90mix]
          Length = 458

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 188/407 (46%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  E
Sbjct: 1   MSSGKIVEIIGAVVDVEFPHGEVPKVYDALTLENGLTLEVQQQLG--DGVVRTIAMGTTE 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V   G+   +       GRV++ LG+P+D    +   + +  I    P    +
Sbjct: 59  GVKRQTPVTATGKPISVPVGKGTLGRVMDVLGRPVDNAGDVEAQE-TWSIHRAAPTFDEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 AGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV 177

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE+F  +G +VL+
Sbjct: 178 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLM 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT++ +V 
Sbjct: 238 FIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR  D      +     
Sbjct: 296 VPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPQIIGQEHYDTA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + + R++E +DI  I G     +      V +   I  +L Q 
Sbjct: 356 RAVQNTLQRYKELKDIIAILGMDELSEDD-KLVVARARKIQRYLSQP 401


>gi|224830554|gb|ACN66372.1| ATP synthase beta chain [Orthomene schomburgkii]
          Length = 476

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +    +   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQXDTILSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVIKEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|330996914|ref|ZP_08320779.1| ATP synthase F1, alpha subunit [Paraprevotella xylaniphila YIT
           11841]
 gi|329571988|gb|EGG53659.1| ATP synthase F1, alpha subunit [Paraprevotella xylaniphila YIT
           11841]
          Length = 528

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 99/429 (23%), Positives = 166/429 (38%), Gaps = 36/429 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  ++     +  L  +    + +  +      +G V+ +  D V    +G  + I
Sbjct: 29  EVGAVLQVSDGVARIYGL-LHAEANELLEFENG---VMGVVMNLEEDNVGAVLLGATDLI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G +V   GR   I  S    GRVI+ LG P+DG  ++G     M +  K P  + RQ 
Sbjct: 85  KEGMIVKRTGRIASIRVSENMLGRVIDPLGVPLDGRGTVGGELFEMPLERKAPGVIYRQP 144

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD-------CFDKVIIS 193
           V +  +TGI+ ID   P+  GQR  +      GK+ +      +             I  
Sbjct: 145 VSEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQRSAYEAGKPVYCIYV 204

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++G  V   +           +VVV AT+ +   L+  AP     I EYF   G + 
Sbjct: 205 AIGQKGSTVANIVNTLREKGAMDYTVVVAATAADPAALQYFAPFAGAAIGEYFRDTGRHA 264

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE----------- 301
           L++ D +++ A + RE++           YP  +F    RLLER                
Sbjct: 265 LVVFDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAAKIINQQEVAEQMND 324

Query: 302 ---------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
                    K  G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++
Sbjct: 325 LPESLKGKVKCGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNQGFRPAIN 384

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+ S+L     ++ E         +   +D +    + +   
Sbjct: 385 VGISVSRVGGSAQIKSMKKVASTLKIDQAQYRELE---AFSKFSNDMDSVTVMTIDRGRK 441

Query: 413 IYDFLKQSP 421
               L Q  
Sbjct: 442 NNQLLIQPQ 450


>gi|325920571|ref|ZP_08182493.1| ATPase FliI/YscN family [Xanthomonas gardneri ATCC 19865]
 gi|325548964|gb|EGD19896.1| ATPase FliI/YscN family [Xanthomonas gardneri ATCC 19865]
          Length = 460

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 144/429 (33%), Positives = 226/429 (52%), Gaps = 6/429 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           E  +   +++ G +     +    T       +G     +        +V+    +  Y+
Sbjct: 32  EPTAGRTLIREGILRRAVGLTLEATG--CEAPMGATCKVEVDGGWVDAEVVGFAGERTYL 89

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      +     V    R   +       GRVI++ G P+DG   + +G+ S+ +   
Sbjct: 90  MPSAELHGLLPNARVVPSRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RGEGSVSMAGV 148

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ +      G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D ++
Sbjct: 149 SINPLAREPITTSLDVGVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIV 208

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVR+F+      + L+++VVV A +D  P+ R      A  IAE+F  +G 
Sbjct: 209 VGLIGERGREVRDFVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGL 268

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA 
Sbjct: 269 NVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAF 328

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +
Sbjct: 329 YTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDVESSVSRVVQDIADDTWR 388

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDV 429
             +  L  L+  +   RD+  IG Y+ G D   D+A+ + P I +FL Q     +   D 
Sbjct: 389 LRIRKLKRLLSAYSSNRDLIAIGAYQRGSDPATDEALARWPDIVEFLGQDVHKAAHLPDS 448

Query: 430 FQEITKKLQ 438
              + + ++
Sbjct: 449 LSALQRLVE 457


>gi|297585419|ref|YP_003701199.1| ATP synthase F1 subunit beta [Bacillus selenitireducens MLS10]
 gi|297143876|gb|ADI00634.1| ATP synthase F1, beta subunit [Bacillus selenitireducens MLS10]
          Length = 472

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 192/416 (46%), Gaps = 25/416 (6%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQV---------IRINLDIVY 71
           G ++ +T     V         +     +VH+ ++S   G+V         + +  D V 
Sbjct: 4   GRVTQVTGPVIDVQFERGQLPEINNAVRIVHEAQSS---GEVDIDLVLEVALHLGDDTVR 60

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + I  G      G    +       GRV N LG+ ID  + + +G+    I  
Sbjct: 61  TVAMSSTDGIVRGMECVDQGAPISVPVGENTLGRVFNVLGQEIDLQEPIPEGERRDPIHR 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P   +     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +  
Sbjct: 121 QAPAYDDLSTNTEILETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIQELINNIAQEHG 180

Query: 191 ---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF 
Sbjct: 181 GISVFAGVGERTREGNDLYFEMKDSGVITKTAMVFGQMNEPPGARMRVALTGLTMAEYFR 240

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG
Sbjct: 241 DEKGADVLLFIDNIFRFTQAGMEVSALLGRMPSAVGYQPTLSTEMGQLQERI--TSTKKG 298

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLAS SR      
Sbjct: 299 SVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEI 358

Query: 366 SADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             DE   +   +   + +++E +DI  I G     +    + V +   I  FL Q+
Sbjct: 359 VGDEHYSVAREVQETLQKYKELQDIIAILGMDELSEED-RQTVSRARRIQFFLSQN 413


>gi|157285167|gb|ABV31323.1| ATPase [Vibrio cholerae]
          Length = 438

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 176/417 (42%), Gaps = 27/417 (6%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            +  L+  V  G+ +   G   +     + +  D V    +G   ++  G  V   GR  
Sbjct: 1   RIHGLAD-VMQGEMIELPG---NRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRIL 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   +G    +  +    P  ++R+ V++  +TG + +D
Sbjct: 57  EVPVGPELLGRVVNTLGEPIDGKGPIG-AKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+ L   ++  + +     I   +G++   +   +     
Sbjct: 116 SMIPIGRGQRELIIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEE 175

Query: 212 DNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
               K ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+
Sbjct: 176 HGALKNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQIS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDG 317
                 P    +P  VF    RLLER     +E              G++TA+  +    
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQA 295

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   + 
Sbjct: 296 GDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIR 355

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 TALAAYRE---LAAFAQFSSDLDEATKRQLTHGQKVTELMKQKQ--YAPMSVFDQAL 407


>gi|23503641|dbj|BAC20417.1| ATP synthase beta-subunit [Characiochloris sasae]
          Length = 376

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I  +
Sbjct: 1   VSMQPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNLGPVEANE-TLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLPDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYSCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|262273112|ref|ZP_06050929.1| ATP synthase beta chain [Grimontia hollisae CIP 101886]
 gi|262222868|gb|EEY74176.1| ATP synthase beta chain [Grimontia hollisae CIP 101886]
          Length = 467

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 188/415 (45%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V    + V  + D +  + +    + +V + +   IV    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQESVPQVYDALNVKREGERLVLEVQQQLGGGIVRTIAMGSS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G+   +       GR++N LG  ID    +G+ +    I  + P   +
Sbjct: 61  DGLRRGLEVENTGKPIEVPVGVETLGRIMNVLGDAIDERGDIGEKE-RYSIHREAPSYED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNATELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYYEMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VL+R++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVI 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 GQEHYDVARGVQSVLQRYKELKDIIAILGMDELSEDD-KLVVARARKIERFLTQP 411


>gi|253559486|gb|ACT32428.1| ATP synthase beta subunit [Trithuria filamentosa]
          Length = 426

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+PID    +  G  + 
Sbjct: 2   NRVRAVALSATDGLMRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPIDNLGPVDTG-TTF 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +  
Sbjct: 61  SIHRSAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQDIAKSKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNQQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   +
Sbjct: 299 DSTSTMLQPWIVGEEHYETAQRVKQTLQRYKELQDIISILGLDELSEED-RLIVARARKM 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|293596677|ref|ZP_05263440.2| ATP synthase F1 [Listeria monocytogenes J2818]
 gi|293591435|gb|EFF99769.1| ATP synthase F1 [Listeria monocytogenes J2818]
 gi|308445540|gb|ADO32958.1| AtpD [Listeria monocytogenes]
          Length = 479

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 176/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            I++  D+V    +   + +  G  V   G    +       GRV N LG  ID D+ L 
Sbjct: 57  AIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLP 116

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                 +I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 117 SDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQE 176

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 177 LIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 236

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 237 TGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 296

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 297 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLA 354

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  L+ R++E +DI  I G     D    ++V +   + 
Sbjct: 355 STSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDELSDED-KQSVSRARRVQ 413

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 414 FFLSQN 419


>gi|149183570|ref|ZP_01861992.1| F0F1 ATP synthase subunit beta [Bacillus sp. SG-1]
 gi|148848711|gb|EDL62939.1| F0F1 ATP synthase subunit beta [Bacillus sp. SG-1]
          Length = 472

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 185/412 (44%), Gaps = 18/412 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQ------VIRINLDIVYICPV 75
           G++  +      V   S  +       VV Q   +D  G        + +  D V    +
Sbjct: 4   GHVLQVMGPVVDVKFESGQLPDIFNALVVKQEAKADAKGIDLTLEVALHLGDDTVRTIAM 63

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + ++ G  V   G    +       GRV N LG+ ID ++ + K      I  + P 
Sbjct: 64  DSTDGLTRGIEVADTGAPISVPVGDVTLGRVFNVLGETIDLEEEIDKSARRDPIHREAPK 123

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     +
Sbjct: 124 FDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSV 183

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   +      +KK+ +V    +E P  R    LT +T+AEYF  +  
Sbjct: 184 FAGVGERTREGNDLYHEMSDSGVIKKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQG 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +    G++T+
Sbjct: 244 QDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGQLQERI--TSTNVGSVTS 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + ++ V  D++ DP   +  + LD    L R L+E G YP VDPLAS SR         +
Sbjct: 302 IQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEE 361

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + R++E +DI  I G     D      V +   +  FL Q+
Sbjct: 362 HYNVARQVQQTLQRYKELQDIIAILGMDELSDED-KLIVSRARRVQFFLSQN 412


>gi|304413049|ref|ZP_07394522.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus
           Regiella insecticola LSR1]
 gi|304283892|gb|EFL92285.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus
           Regiella insecticola LSR1]
          Length = 462

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 182/410 (44%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  +      V    + V      +           V+     +   +V    +G
Sbjct: 1   MATGKIIQVIGAVVDVEFDQKRVPKVYSALEVDLKDSAAKLVLEVQQQLGGGVVRCIVMG 60

Query: 77  IGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V        +   A   GR++N LG PID    +G+ +    I  + P  
Sbjct: 61  SSDGLRRGLKVTDLAHPIEVPVGAATLGRIMNVLGDPIDMKGPIGEKE-RWAIHREAPSY 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                 +   +TGI+V+D+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 120 EELASSQDLLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 179

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  + +  N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 180 AGVGERTREGNDFYHEMMDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 239

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 240 VLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQ 297

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      +  
Sbjct: 298 AVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHY 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 NVARGVQSILQRYQELKDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 406


>gi|302529784|ref|ZP_07282126.1| ATP synthase F1, alpha subunit [Streptomyces sp. AA4]
 gi|302438679|gb|EFL10495.1| ATP synthase F1, alpha subunit [Streptomyces sp. AA4]
          Length = 545

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 172/435 (39%), Gaps = 27/435 (6%)

Query: 6   ETLAQLAEDYSKNLVV-----QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           + +A   E+Y  +        + G ++        V  L       + +   G     LG
Sbjct: 9   DEIAHAIENYVSSYAPSVEREEVGVVADAGDGIAHVEGL-PSAMANELLEFPGG---VLG 64

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119
             + ++   +    +G  E I  G  V   G+   +     + GRV+N LG+ IDG   +
Sbjct: 65  VALNLDARSIGAAILGDFESIEEGQQVKRTGQVLSVPVGDGYLGRVVNPLGQAIDGLGEI 124

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK----- 174
            +      +  K    + RQ V +  +TGI  ID  TP+  GQR  +      GK     
Sbjct: 125 -ETTGRRALELKAASVVERQPVSEPLQTGITAIDAMTPIGRGQRQLIIGDRKTGKTAVAV 183

Query: 175 STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228
            T+++  A  +  D     + I   VG++G  +               + +V A + +S 
Sbjct: 184 DTIINQKANWETGDPKKQVRCIYVAVGQKGSTIASVKSALEDAGAMEYTTIVAAPASDSA 243

Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
             + +AP T   I +++  +G +VL++ D +T+ A + R I+      P    +P  VF 
Sbjct: 244 GFKWIAPYTGSAIGQHWMYEGKHVLIVFDDLTKQADAYRAISLLLRRPPGREAFPGDVFY 303

Query: 289 ELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
              RLLER      E   G++T +  +    ++ +  I  +V SI DG       L   G
Sbjct: 304 LHSRLLERCAKLSDELGAGSLTGLPIIETKANDVSAYIPTNVISITDGQCFFQSDLFNAG 363

Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           + P +D   SVSR+   A     K +  SL   + ++ E         +   +D      
Sbjct: 364 QRPAIDVGISVSRVGGAAQVKAMKNVAGSLRIDLSQYRELE---AFAAFASDLDDASKAQ 420

Query: 407 VHQVPIIYDFLKQSP 421
           + +   +Y+ LKQ  
Sbjct: 421 LERGARLYEVLKQPQ 435


>gi|7708684|emb|CAB90019.1| ATP synthase beta subunit [Thesium humile]
          Length = 453

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V        +       GR+ N LG+PID    +    
Sbjct: 29  LGNNRVRAVAMSATDGLMRGMEVIDTEAPLSVPVGEATLGRIFNVLGEPIDNLGPID-TR 87

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 88  TTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 147

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 148 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARM 207

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 208 RVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 267

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 268 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 325

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 326 DPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 384

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 385 RKIERFLSQP 394


>gi|302747642|gb|ADL63302.1| Atp1 [Scrophularia marilandica]
          Length = 349

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|224830540|gb|ACN66365.1| ATP synthase beta chain [Hypserpa decumbens]
          Length = 468

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +     +  G  V   G    +       GR
Sbjct: 27  KGQDTVGQQINVTCEVQQLLGKNRVXAVAMSATXGLMRGMEVIDTGAPLSVPVGGATLGR 86

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 87  IFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLDTQLSIFETGIKVVDLLAPYRRGGKI 145

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 146 GLFWGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIV 205

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 206 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 265

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 266 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 323

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 324 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRYKELQDIIA 383

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 384 ILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|225621097|ref|YP_002722355.1| F0F1-type ATP synthase subunit alpha [Brachyspira hyodysenteriae
           WA1]
 gi|254807680|sp|C0QW65|ATPA_BRAHW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|225215917|gb|ACN84651.1| F0F1-type ATP synthase, alpha subunit [Brachyspira hyodysenteriae
           WA1]
          Length = 499

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 171/409 (41%), Gaps = 18/409 (4%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                +  L  +V   + ++ +   S  +G    +  + +    +G    I  G  V   
Sbjct: 36  DGIARIIGL-PHVMANEMILFE---SGAVGLAFNLEEETIGAIVLGDYYGIKEGSKVSRL 91

Query: 91  GRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            R   +       GRV+N LG PIDG   +   D    I    P   +RQ V++  +TGI
Sbjct: 92  KRILEVPVGDALLGRVVNPLGVPIDGHGEI-TTDKRRVIEFPAPGIADRQAVKQPLQTGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           + ID  TP+  GQR  +    G GK+   L ++  +       I   +G++   V   ++
Sbjct: 151 KAIDSMTPIGRGQRQLIIGDRGTGKTSIALDAIINQKGTGVICIYVAIGQKASTVAGVVD 210

Query: 208 DYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL-LILDSITRFAHS 265
                   + ++VV AT+ +S  L+ +AP     +AEYF  +      +I D +T+ A++
Sbjct: 211 TLRQHGALEYTIVVAATAADSAPLQYIAPYGGCAMAEYFMYEQKKDTLIIYDDLTKQANA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDP 323
            R+I+      P    +P  VF    RLLER      E   G++TA+  +    +  +  
Sbjct: 271 YRQISLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDELGGGSLTALPIIETQDNEVSAY 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           I  +V SI DG I L  SL   G  P +D   SVSR+   A +   KK+  +L   +  +
Sbjct: 331 IPTNVISITDGQIYLLTSLFMSGVRPAIDVGISVSRVGGNAQTKAMKKVAGTLRLDLASY 390

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
                   +G    G+D      + +   + + LKQ      S   F+E
Sbjct: 391 RSLEAFSQLGI---GLDKATLAQLDRGAKMVELLKQKQY---SPIPFEE 433


>gi|110915618|gb|ABH02597.1| ATP synthase beta subunit [Dactylis glomerata subsp. hackelii]
          Length = 471

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 33  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 92

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 93  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 151

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 152 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 211

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 212 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 271

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             +  +E+  L ERI  ++K  G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 272 QPTXSTEMGXLQERIAXTKK--GSITSIQAVYVPADDXTDPAPATTFAHLDATTVLSRGL 329

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 330 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 389

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 390 D-RLTVARARKIERFLSQP 407


>gi|7708638|emb|CAB89989.1| ATP synthase beta subunit [Sarracenia flava]
          Length = 482

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I    ++        V    +   + ++ G  V   G    +       G+
Sbjct: 41  KGRNTGGQPINXTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGQ 100

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 101 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 159

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 160 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 219

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 220 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 279

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 280 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 337

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 338 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 397

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 398 ILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|7708258|emb|CAB90051.1| ATP synthase beta subunit [Clidemia petiolaris]
          Length = 463

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 26  KGRDTIGQEINVACEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPXSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGEPVDELGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPXRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLIVARARKIERFLSQP 410


>gi|317177882|dbj|BAJ55671.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F16]
          Length = 469

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|123325683|gb|ABM74466.1| ATP synthase beta subunit [Merrillia caloxylon]
          Length = 466

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|157285191|gb|ABV31335.1| ATPase [Vibrio neonatus]
          Length = 417

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 97/407 (23%), Positives = 170/407 (41%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---KYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPINAA-LTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ L   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDTTKKQLDHGAKVTELMKQKQ 399


>gi|150011015|gb|ABR57164.1| F0F1-type ATP synthase beta subunit [Staphylococcus xylosus]
          Length = 470

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 113/410 (27%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + D    +G  S  L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPEINNALVLDVEKDEGTVSLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG  ID D+ L        I  + P   
Sbjct: 64  TDGVKRGTEVRDSGSSISVPVGDATLGRVFNVLGDTIDLDEKLDSSVERDPIHRESPAFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 QLSTKVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AE+F      +
Sbjct: 184 GVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEHFRDVQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D++ DP   +V + LD    L R L E G YP VDPLAS SR  D      D  
Sbjct: 302 AVFVPADDYTDPAPAAVFAHLDATTNLERKLTEMGIYPAVDPLASTSRALDPTIVGQDHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     +    + V +   I  FL Q+
Sbjct: 362 EIARDVQSTLQKYRELQDIIAILGMDELSEED-KQTVERARRIQFFLSQN 410


>gi|14718111|gb|AAK72795.1| ATP synthase beta subunit [Lilium superbum]
          Length = 491

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 16  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVGPQINVTCEVQQLLGNNRVRAVAMS 75

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 76  ATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 134

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 135 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 194

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 195 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 254

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 255 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 312

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 313 EGSITSIQAVYVPADDLTDPAPAATFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 372

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 RIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 429


>gi|16943749|emb|CAD10765.1| atp synthase, beta subunit [Heloniopsis orientalis]
          Length = 498

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|189465903|ref|ZP_03014688.1| hypothetical protein BACINT_02266 [Bacteroides intestinalis DSM
           17393]
 gi|189434167|gb|EDV03152.1| hypothetical protein BACINT_02266 [Bacteroides intestinalis DSM
           17393]
          Length = 528

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 92/427 (21%), Positives = 163/427 (38%), Gaps = 36/427 (8%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  ++     +  L +     + +            V+ +  D V    +G  ++I  
Sbjct: 31  GTVLQVSDGVARIYGL-RNAEANELLEFDNG---IKAIVMNLEEDNVGAVLLGSTDKIKE 86

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G +V    R   I       GRVI+ LG P+DG   +G     M +  K P  + RQ V 
Sbjct: 87  GYVVKRTKRIASIMAGEGMLGRVIDPLGAPLDGKGLIGGELCEMPLERKAPGVIFRQPVN 146

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD--KVIISLV 195
           +  +TG++ +D   P+  GQR  +      GK      T+++  A  +  +    I   +
Sbjct: 147 QPLQTGLKAVDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQRANYEAGNPVYCIYVAI 206

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V   +           ++VV AT+ +   L+  AP     I EYF   G + L+
Sbjct: 207 GQKASTVATIVNTLREYGAMDYTIVVAATAGDPAALQYYAPFAGAAIGEYFRDTGRHALV 266

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE----------- 303
           + D +++ A + RE++           YP  +F    RLLER      +           
Sbjct: 267 VYDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAARIINQEEVAREMNDLP 326

Query: 304 ---------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                     G++TA+  +     + +  I  +V SI DG I L+  L  +G  P ++  
Sbjct: 327 ESLKGKVKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLDTDLFNQGNRPAINVG 386

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     KK+  +L     ++ E         +   +D +    + +     
Sbjct: 387 ISVSRVGGNAQIKAMKKVAGTLKIDQAQYRELE---AFTKFSGDMDPVTALTIDKGQKNT 443

Query: 415 DFLKQSP 421
             L Q  
Sbjct: 444 RLLVQPQ 450


>gi|157285261|gb|ABV31370.1| ATPase [Vibrio gallicus]
          Length = 441

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +      S      + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELP---SGRFALALNLERDSVGAVVMGPYADLQEGMKVIGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    ++  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKITSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMVPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQVELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGAKVTELMKQKQ--YAPMSVFDQAL 410


>gi|21633269|gb|AAM52109.1| ATP synthase beta subunit [Astripomoea grantii]
          Length = 490

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMGVIDTRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|17224721|gb|AAL37082.1| ATP synthase beta subunit [Dioscorea sylvatica]
          Length = 477

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 36  KGRXXXGQQINVTCEVXQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 96  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 154

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 155 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 215 ESKVALVYGQMNEPPGARMRVGWTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 274

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 275 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 332

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 333 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 392

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 393 ILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|37729420|gb|AAN71676.1| ATP synthase beta subunit [Nothofagus antarctica]
          Length = 472

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 10  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQIDVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 68  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDAS-TRSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+++  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVNLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYIEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSXML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|294939284|ref|XP_002782393.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239893999|gb|EER14188.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 524

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 187/413 (45%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLS-QYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G IS +      V   S +   + + +  QG     + +V   +  + V    +   + +
Sbjct: 51  GKISQVIGAVVDVHFASGRLPPVLNSLEVQGFEHRLVLEVAQHLGENTVRTIAMDGTDGL 110

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N +G+PID    + + +    I    P       
Sbjct: 111 VRGQKVVDTGAPISVPVGQGTLGRIMNVIGEPIDELGPI-ECNTRWPIHRPAPTFSEMDT 169

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
           V +   TGI+V+D+  P   G +IG+F G+G+GK+ ++     +         + + VGE
Sbjct: 170 VARQLYTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVVIMELINNIAMKHGGFSVFAGVGE 229

Query: 198 RGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +   + +   +         K+ +V    +E P  R    LT +T+AEYF  + 
Sbjct: 230 RTREGNDLYHEMIAGGVIKKDKAPGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDEE 289

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  + G+IT
Sbjct: 290 GQDVLLFIDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSIT 347

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LD + VL+R +AE G YP VDPL S SR+ D +    
Sbjct: 348 SVQAVYVPADDLTDPAPATTFAHLDANTVLSRHIAELGIYPAVDPLDSTSRMLDPSIVGQ 407

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  S+  ++  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 408 EHYDVARSVQKVLQDYKSLQDIIAILGMDELSEDD-KLTVSRARKMQKFLSQP 459


>gi|112791388|gb|ABI21964.1| ATP synthase beta subunit [Pectobacterium cacticida]
          Length = 421

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 105/381 (27%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  +      + +V + +   +V    +G  + +  G  V +      +       GR
Sbjct: 3   DALEVKNGAEKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLAVNNLDHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGEPVDMKGDIGEEE-RWAIHRPAPTYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|14588839|emb|CAC43015.1| HrcN protein [Pantoea agglomerans]
          Length = 454

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 234/426 (54%), Gaps = 15/426 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V + G ++ I  +   + C      +GD   + +      L +++  +   + +  +G  
Sbjct: 27  VRRFGRVTGINGIL--IECSLPGARIGDLCRIERSGGGSVLSEIVGFSPQKILLSALGAL 84

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD-----SLGKGDLSMEIMSKV 132
           + IS G L+        I  S    G V++  G+ ++          G    +  ++S  
Sbjct: 85  DGISQGALITPLYLPHSICVSTRLLGSVLDGFGRGLEPGGCSAFAEPGLQRNTSPVLSDA 144

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           PP   R R++    TG+R ID    + +GQR+G+FAG+G GK+TLL+  AR+   D ++ 
Sbjct: 145 PPPTERPRIDTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCGKTTLLAELARNTPCDVIVF 204

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGRE+REFI  +      K++V++ ATSD S + R  A  TA  IAE F ++G +
Sbjct: 205 GLIGERGRELREFIDHELDETLGKRTVLLCATSDRSSMERARAAFTATAIAEAFRAEGKS 264

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLLI+DS+TRF  + REI    GE P   G P SV++ L RL+ER G  +  +G ITA+ 
Sbjct: 265 VLLIIDSLTRFERAQREIGIALGEPPGRGGLPPSVYTLLLRLVERAG--QTRQGAITALY 322

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           SVL++ D+ NDP+AD VRS++DGHIVL+R LAE   YP +D LAS+SR        +  +
Sbjct: 323 SVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAIDILASLSRTMSNVVDQEHLR 382

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
              S+  L+  +++   +  +G Y+PG D + D AV+   +I  FL+QS   + + +  +
Sbjct: 383 QAGSIRSLMAAYKQVEMLIRLGEYQPGHDSLADAAVNANDVINHFLRQS---MRTPEPLE 439

Query: 432 EITKKL 437
           ++  +L
Sbjct: 440 QVLTQL 445


>gi|157285059|gb|ABV31269.1| ATPase [Vibrio ordalii]
          Length = 436

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +      S      + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELP---SGRYALALNLERDSVGAVVMGPYADLKEGMKVIGSG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGQPIDGKGPI-EAKLSSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    + ++    + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|113910792|gb|ABI48128.1| ATPase beta subunit [Marsupella emarginata]
          Length = 472

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 34  GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATPGRIFNVLG 93

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 94  EPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 152

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 153 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 212

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 213 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 272

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 273 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 330

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 331 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAISGLDE 390

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 391 LSEED-RLTVARARKIERFLSQP 412


>gi|114509200|gb|ABI75168.1| ATPase alpha subunit [Halophila sp. C864]
          Length = 362

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 19/366 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V     +S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEF---SSGVKGIALNLENENVGIVIFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAKENEKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALQYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A +           P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYXXXXXXXXXXPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  SL   +
Sbjct: 296 SAYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|61196960|gb|AAX39465.1| ATP synthase beta subunit [Chara australis]
          Length = 402

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|17224727|gb|AAL37085.1| ATP synthase beta subunit [Dioscorea hamiltonii]
          Length = 478

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +   A    +  +    +     R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPAIVGEEHYETAQKVKQTSQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|3913118|sp|O47037|ATPB_PICAB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|2764568|emb|CAA04458.1| H+-ATP synthase subunit B [Picea abies]
          Length = 488

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+     +  + + ++ +G+ +   GQ I++  ++        V    
Sbjct: 19  GRIAQIIGPVLDVSFPPGNMPNIYNSLIVKGQGTA--GQEIQVTCEVQQLLGNHKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 77  MSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARITSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLSFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDPL S S + 
Sbjct: 314 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 432


>gi|262283120|ref|ZP_06060887.1| F0F1 ATP synthase subunit beta [Streptococcus sp. 2_1_36FAA]
 gi|262261372|gb|EEY80071.1| F0F1 ATP synthase subunit beta [Streptococcus sp. 2_1_36FAA]
          Length = 468

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 115/413 (27%), Positives = 191/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKITQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D   G       I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFGDDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALAPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQFFLSQN 410


>gi|123325585|gb|ABM74417.1| ATP synthase beta subunit [Burkillanthus malaccensis]
          Length = 462

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKPAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|23503595|dbj|BAC20394.1| ATP synthase beta-subunit [Chloromonas asteroidea]
 gi|23503599|dbj|BAC20396.1| ATP synthase beta-subunit [Chlamydomonas mutabilis]
          Length = 376

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPSDGLTRGMEVLDTGKPLSVPVGKATLGRIFNVLGEPVDNLGPV-KAETTLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E +DI  I G     +      V +   I  +L 
Sbjct: 298 MLQPWIVGEKHYSVAQDVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERYLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|189499031|ref|YP_001958501.1| F0F1 ATP synthase subunit beta [Chlorobium phaeobacteroides BS1]
 gi|226740178|sp|B3EJK9|ATPB_CHLPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189494472|gb|ACE03020.1| ATP synthase F1, beta subunit [Chlorobium phaeobacteroides BS1]
          Length = 462

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 118/412 (28%), Positives = 191/412 (46%), Gaps = 18/412 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V         + D +     +   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFQEGGLPAILDALTVARPDGTKL--VLETQQHLGEERVRTISM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + G+  ++       GR++N +G PIDG   + K + S  I    P 
Sbjct: 59  DATDGLVRGMPVINTGKPIQVPVGPNVLGRMLNVVGDPIDGKGPV-KSEKSYSIHRPTPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +    +    +
Sbjct: 118 FDVLSTKSEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-G 249
            + VGER RE  +  E+      + K+ +V    +E P  R    LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWEEMKESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEN 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L +RI      KG++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTEMGELQDRI--VSTNKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D     DE
Sbjct: 296 VQAIYVPADDLTDPAPATAFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDE 355

Query: 370 KK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 ++  L+ R+++ +DI  I G     D      V +   I  FL Q 
Sbjct: 356 HYNTAQAVKSLLQRYKDLQDIIAILGMDELSDED-KLTVSRARKIQRFLSQP 406


>gi|217034727|ref|ZP_03440128.1| hypothetical protein HP9810_3g12 [Helicobacter pylori 98-10]
 gi|216942810|gb|EEC22309.1| hypothetical protein HP9810_3g12 [Helicobacter pylori 98-10]
          Length = 466

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 3   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGAQKSLVLEVAAHLGGNRVRAIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 63  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 407


>gi|113910910|gb|ABI48187.1| ATPase beta subunit [Plagiothecium laetum]
          Length = 456

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 167/389 (42%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 12  KGQNTAGQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPSSVPVGEATLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+ +D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGETVDNSGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K   V    +E P  R    LTA+T+AEY       +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVASVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|7708493|emb|CAB89941.1| ATP synthase beta subunit [Menyanthes trifoliata]
          Length = 461

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 180/412 (43%), Gaps = 24/412 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIGEEIS 82
           I  V        +   + + +V +G+++     +   +V ++  +  V    +   + + 
Sbjct: 1   IGPVLDVAFPPGKMPKIYNALVVKGRDTADQPINVACEVQQLLGNNRVRAVAMSATDGLK 60

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +     +  I    P  +     
Sbjct: 61  RGMEVIDTGAPXSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTK 119

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   ER
Sbjct: 120 LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGER 179

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 180 TREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNE 239

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 240 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       D 
Sbjct: 298 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 HYDTAQMVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|29726144|gb|AAD00598.2| ATP synthase beta subunit [Hunnemannia fumariifolia]
          Length = 486

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 178/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATAGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA  +A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTAXXMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGEEHYETAQRVXQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|75908515|ref|YP_322811.1| F0F1 ATP synthase subunit beta [Anabaena variabilis ATCC 29413]
 gi|118573506|sp|Q3MAS0|ATPB_ANAVT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|75702240|gb|ABA21916.1| ATP synthase F1 subcomplex beta subunit [Anabaena variabilis ATCC
           29413]
          Length = 482

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V   S  +  + + +  +G N    GQ + + +++        +    
Sbjct: 11  GYITQIIGPVVDVKFPSGKLPQIYNALTIKGTNEA--GQELNLTVEVQQLLGDNQIRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +   + ++ I    P
Sbjct: 69  MSSTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +         
Sbjct: 128 KLTELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 188 VFAGVGERTREGNDLYNEMIESGVINKDNLNESKIALVYGQMNEPPGARMRVGLSGLTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S + 
Sbjct: 306 TTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTML 365

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 DE      ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 QPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGLDELSEED-RLIVARARKVERFLSQP 424


>gi|34536477|dbj|BAC87672.1| beta subunit of ATP synthase [Chlamydomonas noctigama]
          Length = 376

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I  K
Sbjct: 1   VSMQPTDGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGPV-KIEDTLPIHRK 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLQDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D       S+   + R++E +DI  I G     +    + V +   I  FL 
Sbjct: 298 MLQPWILGDKHYSAAQSVKKTLQRYKELQDIIAILGLDELSEED-RQTVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|241912900|gb|ACS72128.1| AtpB [Pterichis acuminata]
          Length = 489

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G    +       GR+ N +G+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMKVINTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVDICTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|112791382|gb|ABI21961.1| ATP synthase beta subunit [Pectobacterium carotovorum]
          Length = 421

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           D +  +      + +V + +   IV    +G  + +  G  V +      +       GR
Sbjct: 3   DALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLNHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGDPIDMKGDIGEEE-RWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|20146562|gb|AAM12435.1| ATP synthase alpha subunit [Diapensia lapponica]
          Length = 356

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 19/360 (5%)

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            I   G    I  GDLV   G     P      GRV++ LG PIDG   LG  +    + 
Sbjct: 1   GIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGPLGDHE-RRRVE 59

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD- 188
            K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +     
Sbjct: 60  VKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMN 119

Query: 189 ----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
                       +   +G++   V + ++     N    S++V AT  +   L+ +AP +
Sbjct: 120 SRSTSESETLYCVYVAIGQKRSTVAQLVKILSKANAMEYSILVAATPSDPAPLQFIAPYS 179

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER 
Sbjct: 180 GCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERA 239

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                +   G++TA+  +     + +  I  +V  I DG I L   L   G  P ++   
Sbjct: 240 AKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINVGL 299

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+   A     K++  S    + ++ E   +  +  +   +D      +++   + +
Sbjct: 300 SVSRVGSAAQLKTMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNRGARLTE 356


>gi|19033061|gb|AAL83515.1|AF408787_1 ATP synthase beta subunit [Tolypella prolifera]
          Length = 402

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVVDTGVPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQDNISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|241912838|gb|ACS72097.1| AtpB [Chloraea reticulata]
          Length = 489

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V Q  + D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIQ--SRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVSRARKIERFLSQP 426


>gi|150187209|emb|CAK30196.1| ATP synthase alpha subunit [Streptococcus equinus]
          Length = 367

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 154/367 (41%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AFGMAQNLESNDVGIIILGDFSSIREGDEVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   + +   +  + +  P  M R+ V +  +TGI+ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDI-ETTATRPVETPAPGVMQRKSVSEPLQTGIKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|113910868|gb|ABI48166.1| ATPase beta subunit [Physcomitrella patens]
          Length = 417

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NKVRAVAMSATDGLMRGMDVVDTGAALSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTF 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLVVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|7620567|gb|AAF64670.1| F1 ATPase alpha subunit [Cycas revoluta]
          Length = 392

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 84/400 (21%), Positives = 151/400 (37%), Gaps = 23/400 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V   S  +  G+ V      S   G  +    + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYG-SNEIQAGEMVEFA---SGVKGIALNPENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSPVPIGRGQREPIIGDRQTGKTAIAIDTISNQKRMNSKGTSESEKLYRVYVAIGQ 175

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +     + ++   G D  +  ++V AT+ +   L+ +AP       EYF   G +  +I 
Sbjct: 176 KRSTAAQLVQILSGADASEYPIIVAATASDPAPLQFLAPYPGCAAGEYFRDNGMHASIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D  ++ A + R+++      P     P  V     RL ER      +   G++TA+  + 
Sbjct: 236 DDPSKQAVAYRQMSLLLRRPPGREASPGDVLYLHSRLSERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     +++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMRQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S    + ++ E   +     +   +D       ++   + 
Sbjct: 356 SSKPELAQYRE---VAAFAQFGSDLDAATQAPSNRGARLT 392


>gi|310798044|gb|EFQ32937.1| ATP synthase F1 [Glomerella graminicola M1.001]
          Length = 517

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 181/428 (42%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQ--YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           G I  +      V   +      L             L     +  ++V    +   E +
Sbjct: 48  GKIYQVIGAVVDVKFDTAKLPAILNALETTNNDQKLVLEVAQHLGENVVRCIAMDGTEGL 107

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    I       GR++N  G PID    + K    + I ++ P  +++  
Sbjct: 108 VRGRPATDTGAPITIPVGPETLGRIMNVTGDPIDERGPI-KSSKRLPIHTEPPEFIDQST 166

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   VGE
Sbjct: 167 TAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGE 226

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   +         D   K  +V    +E P  R    LT +TIAEYF  +   
Sbjct: 227 RTREGNDLYHEMQETSVIQLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQ 286

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +  +KG+IT+V
Sbjct: 287 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAIDMGGMQERI--TTTKKGSITSV 344

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      D 
Sbjct: 345 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQDH 404

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
               + +  ++  ++  +DI  I G     +      V +   I  FL Q     +   V
Sbjct: 405 YDTATRVQQILQEYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP---FTVAQV 460

Query: 430 FQEITKKL 437
           F  I  KL
Sbjct: 461 FTGIEGKL 468


>gi|261839863|gb|ACX99628.1| F0F1 ATP synthase subunit beta [Helicobacter pylori 52]
 gi|315587020|gb|ADU41401.1| ATP synthase F1 sector beta subunit [Helicobacter pylori 35A]
 gi|317012909|gb|ADU83517.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Lithuania75]
 gi|317180864|dbj|BAJ58650.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F32]
 gi|317182385|dbj|BAJ60169.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F57]
 gi|332673930|gb|AEE70747.1| ATP synthase F1 sector beta subunit [Helicobacter pylori 83]
          Length = 469

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|114448846|gb|ABI74946.1| ATP synthase alpha subunit [Polianthes geminiflora]
 gi|114448848|gb|ABI74947.1| ATP synthase alpha subunit [Camassia leichtlinii]
          Length = 362

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 153/366 (41%), Gaps = 20/366 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKAMLGRVVDALGVPIDGKGALSNHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVR 203
             P+  GQR  +      GK+ +      +                 +   +G++   V 
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNERGTSESETLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER      +   G+ TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|63253179|dbj|BAD98358.1| beta subunit of ATP synthesis [Davallia denticulata]
 gi|63253183|dbj|BAD98361.1| beta subunit of ATP synthesis [Davallia denticulata]
 gi|63253191|dbj|BAD98367.1| beta subunit of ATP synthesis [Davallia embolostegia]
          Length = 464

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEDD-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|302388467|ref|YP_003824289.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
 gi|302199095|gb|ADL06666.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1]
          Length = 464

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 115/423 (27%), Positives = 190/423 (44%), Gaps = 17/423 (4%)

Query: 24  GYISSITSVYYTVTCL--SQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGEE 80
           G I  +      V     S    + D +         + +V +   +  V    +   E 
Sbjct: 4   GKIVQVLGPVVDVEFFEGSDLPRMKDALEVDNDGKRCVMEVAQHMGNSTVRCIMLASSEG 63

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   ++       GR+ N LG+ ID    L +G     I    P    + 
Sbjct: 64  LYKGMEVMATGEGIKVPVGEQTLGRLFNVLGETIDHGGDL-EGGPQWVIHRDPPAFEEQS 122

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
            V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VG
Sbjct: 123 PVAEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVG 182

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  +   +      + K+ +V    +E P  R     T +T+AEYF  +   NVLL
Sbjct: 183 ERSREGNDLWTEMGESGVISKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHKNVLL 242

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G++T+V +V 
Sbjct: 243 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERI--TSTKNGSVTSVQAVY 300

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R + E+G YP VDPLAS SR+ +      +  ++ 
Sbjct: 301 VPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLASNSRILEPDVVGEEHYEVA 360

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             +  ++ +++E +DI  I G     D      V++   I  FL Q     S  + F  +
Sbjct: 361 RKVQEILQKYKELQDIIAILGMEELGDED-KTTVYRARKIQKFLSQP---FSVAENFTGV 416

Query: 434 TKK 436
             K
Sbjct: 417 AGK 419


>gi|239586335|gb|ACR83542.1| ATP synthase beta subunit [Pectobacterium carotovorum]
          Length = 421

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  +      + +V + +   IV    +G  + +  G  V +      +       GR
Sbjct: 3   DALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLDHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGDPIDMKGEIGEEE-RWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|75333255|sp|Q9BA92|ATPB_TRAFO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|13236706|gb|AAK14658.1| ATP synthase beta subunit [Trachycarpus fortunei]
          Length = 496

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS---DNLGQVIRINLDI-VYICPVGIG 78
           G I+ I   V   V    +   + + +V +G+++   +   +V ++  +  V    +   
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVQINVTCEVQQLLGNNRVRAVAMSAT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|312285233|gb|ADQ64358.1| ATP synthase beta subunit [Jateorhiza macrantha]
          Length = 469

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D  GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TNLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|241912868|gb|ACS72112.1| AtpB [Myrosmodes cochlearis]
 gi|241912870|gb|ACS72113.1| AtpB [Myrosmodes cochlearis]
          Length = 489

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + ++   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALII--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R     TA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGFTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|157151073|ref|YP_001450821.1| F0F1 ATP synthase subunit beta [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189081352|sp|A8AYG1|ATPB_STRGC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157075867|gb|ABV10550.1| ATP synthase F1, beta subunit [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 468

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 115/413 (27%), Positives = 191/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKITQVIGPVVDVAFAAGDRLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D   G       I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFGDDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALAPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQFFLSQN 410


>gi|7708618|emb|CAB89981.1| ATP synthase beta subunit [Rheum pinchonii]
          Length = 489

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 181/421 (42%), Gaps = 29/421 (6%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           GG I  I      V     +   +   +V  G   D  GQ I +  ++        V   
Sbjct: 18  GGRIVQIIGPVLDVAFPPGKMPNIYSALVVXG--RDTAGQPINVXCEVQQLLGNNRVRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 76  AMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNFGPVDTC-TTFPIHRSA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 135 PAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G IT++ +V V  D+  DP   +  + LD   VL R LA +G YP VDPL S S +
Sbjct: 313 STKEGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLARGLAAKGIYPAVDPLDSTSTM 372

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +T ++ R++E +DI  I G     +      V +   I  FL Q
Sbjct: 373 LQPRIVGKEHYETAQRVTQILQRYKELQDIITILGLDELSEED-RVTVARARKIERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|55056888|emb|CAF21945.1| ATP synthase beta subunit [Welwitschia mirabilis]
          Length = 449

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    + + D
Sbjct: 41  LGNNTVRAVAMSATDGLKRGMKVIDTGAPLSVPVGKATLGRIFNVLGEPVDNLGPV-ETD 99

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 100 KTSPIHRSAPTFPELDTNLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 159

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 160 NIAKAHGGVSVFGGVGERTREGNDLYMEMKQSGVINEKNITESKVALVYGQMNEPPGARM 219

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               +A+ +AEYF      +VLL +D+I RF  +  EI+   G +P A GY  ++ +E+ 
Sbjct: 220 RVGFSALAMAEYFRDVNKQDVLLFIDNIFRFVQAGSEISALLGRMPSAVGYQPTLSTEMG 279

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 280 SLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 337

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 338 DPLDSTSTMLQPGIVGEEHYETAQGVKQTLQRYKELQDIITILGLDELSEED-RLTVARA 396

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 397 RKIERFLSQP 406


>gi|308473481|ref|XP_003098965.1| CRE-ATP-2 protein [Caenorhabditis remanei]
 gi|308267929|gb|EFP11882.1| CRE-ATP-2 protein [Caenorhabditis remanei]
          Length = 551

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I ++      V        + + +   G++   + +V   +  ++V    +   E 
Sbjct: 78  ASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEG 137

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   +I       GR++N +G+PID    +     +  I ++ P  +   
Sbjct: 138 LVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKHFAA-IHAEAPEFIEMS 196

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 197 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 256

Query: 197 ERGREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +            K  +V    +E P  R    LT +T+AEYF  + 
Sbjct: 257 ERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQE 316

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT
Sbjct: 317 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSIT 374

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VL+R +AE   YP VDPL S SR+ D      
Sbjct: 375 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNIVGQ 434

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 435 NHYDIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 486


>gi|238759558|ref|ZP_04620720.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236]
 gi|238702217|gb|EEP94772.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236]
          Length = 435

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G  S  + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGTASKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|320354320|ref|YP_004195659.1| type III secretion system ATPase, FliI/YscN [Desulfobulbus
           propionicus DSM 2032]
 gi|320122822|gb|ADW18368.1| type III secretion system ATPase, FliI/YscN [Desulfobulbus
           propionicus DSM 2032]
          Length = 459

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 146/422 (34%), Positives = 227/422 (53%), Gaps = 11/422 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL-GQVIRINLDIVYICPVGI 77
           +   G +  I  +   V        +G    +   ++ + +  +++  + +   + P+G 
Sbjct: 14  IRVYGQVHRIVGLV--VEGTCARSSIGSLCELFPLQDGEVIPAEIVGYSNNRALLMPLGE 71

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
              +  G  +        IS      GRV++ + +P+D    L        + S  P  M
Sbjct: 72  LRGLGPGSRIRVKKEQATISVGDGLLGRVLDGMAQPLDQGPPLYL-PHEKALYSLPPGPM 130

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  + +    GIR I+       GQR+G+ AGSG+GKS LL M A+    D  +I+L+G
Sbjct: 131 QRDAITQPLDLGIRAINGLLTCGIGQRMGIMAGSGVGKSVLLGMMAKYAKADINVIALIG 190

Query: 197 ERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV+EFI  D   ++L  SV+V  TSD+SP+LR      A  IAEYF  +G NVLL+
Sbjct: 191 ERGREVKEFIERDLGKESLAHSVIVAVTSDQSPLLRMRGAFVATAIAEYFCQRGKNVLLM 250

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DS+TRFA ++REI  + GE P  +GY  SVF+ LP+LLER G  +  +G+IT + +VLV
Sbjct: 251 MDSVTRFAMAMREIGLSIGEPPTTKGYTPSVFATLPKLLERAGNFQ-HQGSITGLYTVLV 309

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           DGD+  +P+ADSVRSILDGHIVL+RS+A +  YP +D + S SR+     ++  ++L   
Sbjct: 310 DGDDLTEPVADSVRSILDGHIVLSRSIAAKNHYPAIDVMMSTSRVMRDITTSRHRELAGK 369

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
              ++  + E+ D+  IG Y  G +  +D A+ ++  I  FL Q   + S     +E   
Sbjct: 370 ARSVMAIYRESEDLINIGAYATGSNKKIDYAISRMDAINAFLTQGFEESS---TLEETIA 426

Query: 436 KL 437
            +
Sbjct: 427 AM 428


>gi|89242552|gb|ABD64634.1| ATPase beta subunit [Alstroemeria sp. Qiu 96143]
          Length = 436

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGSTLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIT 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 DSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|63091921|emb|CAH58815.1| ATP synthase alpha chain [Enterococcus saccharolyticus]
          Length = 367

 Score =  275 bits (704), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +          G    +  + V I  +G  E I  GD V   GR  
Sbjct: 1   RAHGL-ENAMSGELLEFSNG---AFGMAQNLESNDVGIIILGDFETIREGDTVKRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + K D    + ++ P  M+R+ V +  +TG++ ID
Sbjct: 57  EVPVGDSLIGRVVNPLGQPIDGYGPI-KTDTFRPVEAEAPGVMDRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRTQVETLRR 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     I E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGAMDYTIVVSAGASQPAPLLYIAPYAGTAIGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGVRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|307153843|ref|YP_003889227.1| ATP synthase F1 subunit beta [Cyanothece sp. PCC 7822]
 gi|306984071|gb|ADN15952.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7822]
          Length = 483

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 189/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ +          S  +  + + +  +G N      +   +V ++  D  V    + 
Sbjct: 10  GKITQVIGPVVDAEFPSGKLPRIYNALKVKGTNPSGAEVNITCEVQQLLGDNQVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +S G  +   G    +    C  GR+ N LG+P+D    +   + +  I    P  
Sbjct: 70  STDGLSRGMDIVDTGAPISVPVGKCTLGRIFNVLGEPVDEKGPVNVTE-TFPIHRPAPKL 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            + +   K F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +S+ 
Sbjct: 129 TDLETKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   + +             K  +V    +E P  R    L+A+T+AEY
Sbjct: 189 GGVGERTREGNDLYNEMIESKVINSDNPEESKIALVYGQMNEPPGARMRVGLSALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 249 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +   
Sbjct: 307 EGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 GIVGKEHYDTARAVQSTLQRYKELQDIIAILGLDELSEED-RLTVDRARKIERFLSQP 423


>gi|19033051|gb|AAL83510.1|AF408782_1 ATP synthase beta subunit [Chara connivens]
          Length = 402

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGSPLSVPVGETTLGRIFNVLGEPVDNLGPVDTS- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|241912872|gb|ACS72114.1| AtpB [Myrosmodes nubigena]
          Length = 489

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + ++   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALII--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|222152000|ref|YP_002561160.1| ATP synthase beta subunit [Macrococcus caseolyticus JCSC5402]
 gi|254808156|sp|B9E8E6|ATPB_MACCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222121129|dbj|BAH18464.1| ATP synthase beta subunit [Macrococcus caseolyticus JCSC5402]
          Length = 471

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 188/411 (45%), Gaps = 12/411 (2%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +++   G +  +   +  +  L+  + L D    +G  +    +V + +  D V    + 
Sbjct: 5   HVIQVMGPVIDVRFEHGQLPALNNALTL-DIERGEGNTTKLTLEVALHLGDDAVRTIAMS 63

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GRV N LG+ ID +  L        I  + P  
Sbjct: 64  STDGVQRGAQVTDTGAPISVPVGDATLGRVFNVLGEKIDLEPELDGTVRRDPIHRQAPKF 123

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                  +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + 
Sbjct: 124 EELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVF 183

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   
Sbjct: 184 AGVGERTREGNDLFHEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQ 243

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +    G++T++
Sbjct: 244 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSI 301

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       + 
Sbjct: 302 QAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALTPAVVGEEH 361

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +   + ++ E +DI  I G     D    K V +   I  FL Q+
Sbjct: 362 YEVARQVQATLQKYRELQDIIAILGMDELSDED-KKTVSRARRIQFFLSQN 411


>gi|114762158|ref|ZP_01441626.1| H+-transporting two-sector ATPase, alpha/beta subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114545182|gb|EAU48185.1| H+-transporting two-sector ATPase, alpha/beta subunit [Roseovarius
           sp. HTCC2601]
          Length = 453

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 164/437 (37%), Positives = 248/437 (56%), Gaps = 3/437 (0%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62
           + LE    LA+          G + S+      V  L+   C+GD +     + +  G+V
Sbjct: 2   EKLELDGLLAQITQIRPARAVGRVRSVDGTVIWVRGLAHLACIGDRLRLYHADGELGGEV 61

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122
           +RI  D+V + P    E +S  D V   G   ++PS  W GRVI+  G+P+DG  SL  G
Sbjct: 62  LRIRDDLVAMLPDEGPEGVSQDDRVAVLGPPVLAPSNDWVGRVIDPYGQPLDGR-SLSSG 120

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
            L     +  PPA  R+ +    ++G+   D F P+  GQR+G+FAGSG+GKS LL+  A
Sbjct: 121 SLRRPFRASPPPAAQRRGLGGRLRSGLAAFDTFLPIVRGQRVGLFAGSGVGKSRLLASLA 180

Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
           R    D V+++L+GERGREV +F+ D LG + + +SVV+ A+SD SP+ R+   L A+T+
Sbjct: 181 RGVEADVVVLALIGERGREVHDFVHDVLGPEGMARSVVIAASSDRSPLERRRCALAAMTV 240

Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           AE+F   G  VL + DSITRFA + RE+A  +GE+P  RG+P S  +++ RL ER GP  
Sbjct: 241 AEHFRDTGRQVLFLADSITRFAEAHREVAVAAGEMPALRGFPPSTANQIMRLAERAGPGL 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G+ITA+ SVLV G +  +PIAD +R +LDGH+VL+R +AE GR+P ++ L SVSR  
Sbjct: 301 AGSGDITAIFSVLVAGSDMEEPIADILRGVLDGHVVLSREIAERGRFPAINVLRSVSRSL 360

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +A + +E  ++    HL+  +  +  +   G YR G D +LD+A+   P +  F     
Sbjct: 361 PEAATEEENDVLLQARHLLGAYARSETMIRAGLYREGEDPLLDQAIRAWPDLDTFFS-EA 419

Query: 422 SDLSSEDVFQEITKKLQ 438
           +       F ++   L+
Sbjct: 420 APHGPHAAFNQLRLILR 436


>gi|193062173|ref|ZP_03043269.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E22]
 gi|194426383|ref|ZP_03058938.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli B171]
 gi|17384650|emb|CAC81862.1| EscN protein [Escherichia coli]
 gi|192932393|gb|EDV84991.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli E22]
 gi|194415691|gb|EDX31958.1| type III secretion apparatus H+-transporting two-sector ATPase
           [Escherichia coli B171]
 gi|195183198|dbj|BAG66743.1| translocator EscN [Escherichia coli O111:H-]
 gi|254692340|emb|CAR47981.1| EscN protein [Escherichia coli]
 gi|254692408|emb|CAR48051.1| EscN protein [Escherichia coli]
          Length = 446

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 155/409 (37%), Positives = 227/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I++I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKITNIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHISG 88

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P+  + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNITAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAE+F  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEFFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+      ++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+     I  F++QS  D+SS +
Sbjct: 387 IATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFIQQSTKDISSYE 435


>gi|61968317|gb|AAX57085.1| ATP synthase beta subunit [Securinega durissima]
          Length = 479

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFSPGKMPNIYNALVVKG--RDTAGQQITVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGDPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYKEMKESRVINEENIGESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPKIVGEEHYETAQRVKQTLQRYKEVQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|47459046|ref|YP_015908.1| F0F1 ATP synthase subunit alpha [Mycoplasma mobile 163K]
 gi|81697070|sp|Q6KI79|ATPA_MYCMO RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|47458375|gb|AAT27697.1| ATP synthase alpha chain [Mycoplasma mobile 163K]
          Length = 523

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/438 (25%), Positives = 188/438 (42%), Gaps = 19/438 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M      ++ + +   K+  V       G I ++      V+ L +   LG+ VV + +N
Sbjct: 1   MSIKASDISSIIKQQIKDFNVTSDKKEIGEILTVGDGIAYVSGL-ENARLGELVVFENEN 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
               G V+ +    V +  +    ++  G  V   G+   +       GRV+N LG+PID
Sbjct: 60  ---YGLVLNLEEYAVGVAIMDGSNDLIEGQKVRRTGKVISVKVGDQLIGRVLNGLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     + +I    P  M R+ V     TGI  ID   P+  GQR  +      GK
Sbjct: 117 GLGQI-TSTKTRKIFQIAPGVMTRKEVNVPLDTGIITIDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILR 231
           + +      +  D     I   +G++   + + ++     D +K + V+ +++ E   L+
Sbjct: 176 TAIAMDTIINQKDKDVLCIYVAIGQKNSSIAQIVQKLKDHDAMKYTTVINSSASELAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T VTIAE + + G +VL++ D +++ A + R ++      P    +P  VF    
Sbjct: 236 YIAPYTGVTIAEEWMANGKDVLIVYDDLSKHAIAYRTLSLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           +LLER     KE   G+ITA+  V     + +  I  ++ SI DG I    SL + G+ P
Sbjct: 296 QLLERAARVTKEFGGGSITALPIVETQSGDISAYIPTNIISITDGQIFTIESLFKSGQRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A     K   SSL   + ++ E +       +   +D      +  
Sbjct: 356 AIDIGFSVSRVGSAAQIPAIKSFASSLKLELAQYNEVK---AFAQFGSDLDETTTNILKH 412

Query: 410 VPIIYDFLKQSPSDLSSE 427
              IY+ LKQS     S+
Sbjct: 413 GQKIYEILKQSQYSPISQ 430


>gi|89897658|ref|YP_521145.1| F0F1 ATP synthase subunit beta [Desulfitobacterium hafniense Y51]
 gi|89337106|dbj|BAE86701.1| ATP synthase F1 beta subunit [Desulfitobacterium hafniense Y51]
          Length = 456

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/363 (28%), Positives = 172/363 (47%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G    + G    +       GR+ N LGK ID  + +   D
Sbjct: 40  LGNNTVRCVAMSSTDGLQRGMAALNTGAPITVPVGPATLGRIFNVLGKAIDNGEEV-HTD 98

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I    P  +++       +TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 99  TSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELIN 158

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +   +      + K  +V    +E P  R    LT +
Sbjct: 159 NIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVIDKMAMVFGQMNEPPGARLRVGLTGL 218

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 219 TMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI- 277

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +    G+IT+V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S S
Sbjct: 278 -TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLNRAISEKGIYPAVDPLDSNS 336

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+        +  K+   +  ++ +++E +DI  I G     +      V +   I  FL
Sbjct: 337 RILSPQIIGEEHYKVARDVQQILQKYKELQDIIAILGMDELSEDE-KLVVSRARRIERFL 395

Query: 418 KQS 420
            Q 
Sbjct: 396 SQP 398


>gi|21672302|ref|NP_660369.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|4033705|sp|Q07232|ATPB_BUCAP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2827018|gb|AAC38110.1| ATP synthase subunit beta [Buchnera aphidicola]
 gi|21622900|gb|AAM67580.1| ATP synthase beta chain [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 466

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 116/412 (28%), Positives = 185/412 (44%), Gaps = 15/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + + +  + K    + +V + +   IV    +G  
Sbjct: 2   IATGKIIQIIGAVVDVEFDQNSVPKIYNALEVKNKKIQLILEVQQQLGAGIVRTIAMGST 61

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVP 133
             +  G +V   G   ++       GR+IN LGK ID    L   D S     EI    P
Sbjct: 62  NGLKRGLIVIDLGHYIKVPVGQATLGRIINVLGKTIDNKGPLKNLDNSKLEYWEIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               +   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +    S
Sbjct: 122 SYQEQASSQEILETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYS 181

Query: 194 L---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +F  +     +  K  +V    +E P  R     T +TIAE F  +G
Sbjct: 182 VFTGVGERTREGNDFYHEMKDSKVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEG 241

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+IT+
Sbjct: 242 RDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTKEGSITS 299

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V +V V  D+  DP   +  + LD  + L+R +A  G YP +DPL S SR  D     D 
Sbjct: 300 VQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIAALGIYPAIDPLNSTSRQLDPYIVGDE 359

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++ R++E +DI  I G            V +   I  FL Q 
Sbjct: 360 HYDTARGVQSILQRYQELKDIIAILGMDELSQED-KILVSRARKIQRFLSQP 410


>gi|14718173|gb|AAK72825.1| ATP synthase beta subunit [Peumus boldus]
          Length = 488

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 12  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 71

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 72  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 130

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 131 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 190

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 191 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEY 250

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 251 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 308

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 309 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 368

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 369 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 425


>gi|7708195|emb|CAB90034.1| ATP synthase beta subunit [Clethra arborea]
          Length = 484

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 24/415 (5%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR------INLDIVYICPVGIGE 79
           +  I  V        +   + + ++ +G+++     ++       +  + V    +   +
Sbjct: 14  VQIIGPVLDVAFPTGKMPNIYNALIVRGRDTAGQPMIVTCEVQQLLGNNRVRAVAMSATD 73

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  +  
Sbjct: 74  GLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQL 132

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG-- 196
                 F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G  
Sbjct: 133 DTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGV 192

Query: 197 -ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF  
Sbjct: 193 GERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRD 252

Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+
Sbjct: 253 VNEQDVLLFIDNIFRXVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGS 310

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +      
Sbjct: 311 ITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIV 370

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 GEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|23503617|dbj|BAC20405.1| ATP synthase beta-subunit [Chlamydomonas tetragama]
          Length = 376

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 169/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + +G+ ++ I  +
Sbjct: 1   VSMQPTDGLMRGMEVVDSGKPLSVPVGRDTLGRIFNVLGEPVDNLGPVKQGE-TLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APLFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLPDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYQTAQSVKKTLQRYKELQDIIAILGLDELSEED-RLVVSRARRIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|13236740|gb|AAK14675.1| ATP synthase beta subunit [Wendlandiella gracilis var. polyclada]
          Length = 498

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPAGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633437|gb|AAM52193.1| ATP synthase beta subunit [Poranopsis paniculata]
          Length = 490

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSD---NLGQVIRINLDI-VYICPVGIG 78
           G I  I      V      +  + + +V QG++++      +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPYIYNALVVQGRDNEQTKVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGLEVIDTGAPISVPVGGSTLGRIFNVLGKPVDHLGPVD-TNTTSHIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEETIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|291276667|ref|YP_003516439.1| ATP synthase F1 sector subunit beta [Helicobacter mustelae 12198]
 gi|290963861|emb|CBG39697.1| ATP synthase F1 sector beta subunit [Helicobacter mustelae 12198]
          Length = 466

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 196/409 (47%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I+ +      V   +    + + +       G+    + +V     D  +    + + 
Sbjct: 3   GKITQVIGPVVDVDFDAYLPAINEALDVDYQIDGEKKKLVLEVAAHLGDHRIRAIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G+   +       GR+ N +G+ IDG + L K   +  I  + P   N
Sbjct: 63  EGLTRGQKVTARGKMIEVPVGEKVLGRIFNVIGEVIDGGEEL-KDVQTWPIHREAPSFEN 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV S LD   VLNR +AE+G YP VDPL S SR+ D      +  +
Sbjct: 300 VYVPADDLTDPAPASVFSHLDAKTVLNRKIAEKGIYPAVDPLDSSSRILDPQIVGEEHYR 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   +  FL Q 
Sbjct: 360 IATGIQQILQKYKDLQDIIAILGMDELSEED-KKTVERARKVEKFLSQP 407


>gi|312285177|gb|ADQ64330.1| ATP synthase beta subunit [Abuta rufescens]
          Length = 469

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFLPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+PID    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-SRTTSPIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KXHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|37720997|gb|AAN32501.1| ATP synthase beta subunit [Lanaria lanata]
          Length = 497

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKXLQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|302747318|gb|ADL63140.1| Atp1 [Acanthus mollis]
          Length = 349

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQCYSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKEVCGSLKLELAQ 349


>gi|7708452|emb|CAB89915.1| ATP synthase beta subunit [Irvingia malayana]
 gi|14718087|gb|AAK72784.1| ATP synthase beta subunit [Irvingia malayana]
          Length = 490

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 169/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 58  NVXCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAXLSVPVGGATLGRIFNVLGEPVD 117

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 118 DLGPVD-TRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 176

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 177 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQ 236

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 237 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 296

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 297 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 354

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 355 AAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 414

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 415 D-RLTVARARKIERFLSQP 432


>gi|302747644|gb|ADL63303.1| Atp1 [Sesamum triphyllum]
          Length = 349

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKAKGESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|21684899|emb|CAD11576.1| ATP synthase beta subunit [Distichia acicularis]
          Length = 465

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/421 (25%), Positives = 181/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I  I      V  L   +       VV   K+ D +GQ I +  ++        +   
Sbjct: 15  GHIVQIIGPVLDVVFLPGGLPNIYNALVV---KDQDTVGQDIXVTCEVQQLLGNNRIRAV 71

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+PID    +     ++ I    
Sbjct: 72  AMNATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGQPIDNLGPVDTS-TTLPIHRSA 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P  +         +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        
Sbjct: 131 PAFIELDTKLSILETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGV 190

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 191 SVFAGVGERTREGNDLYKEMKESGVINEKKISESKVALVYGQMNEPPGARMRVGLTALTM 250

Query: 242 AEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF       +L  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 251 AEYFRDVNQKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V+PL S S +
Sbjct: 309 STKKGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAAKGIYPAVNPLDSTSTI 368

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +D+  + G    ++      V +   I  FL Q
Sbjct: 369 LQSNIVGKEHYETAQRVKQTSQRYKELQDVISVLGLDELLEED-RLIVARARKIERFLSQ 427

Query: 420 S 420
            
Sbjct: 428 P 428


>gi|161833662|ref|YP_001597858.1| ATP synthase F1 subunit alpha [Candidatus Sulcia muelleri GWSS]
 gi|189081325|sp|A8Z5R1|ATPA_SULMW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|152206151|gb|ABS30461.1| ATP synthase F1, alpha subunit [Candidatus Sulcia muelleri GWSS]
          Length = 526

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/421 (23%), Positives = 166/421 (39%), Gaps = 36/421 (8%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L      G+ V  +       G V+ +  + V I  +G  + I  GD V   
Sbjct: 37  DGVANVYGL-FNAIYGEIVEFENG---LKGIVLNLEEENVGIILIGSSKGIKEGDKVIRT 92

Query: 91  GRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
           G    I+   C  GRVIN+LG PIDG   +      M +  K P  + R+ V +  +TGI
Sbjct: 93  GMISSINVGECMLGRVINSLGVPIDGKGPIYGNLFLMPLERKAPGVIYREPVIEPLQTGI 152

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF-------DKVIISLVGERGREV 202
           + ID   P+  GQR  +      GK+TL      +             I   +G++   +
Sbjct: 153 KCIDSMIPIGRGQRELIIGDRQTGKTTLAIDTIINQKKFYDMGNPVYCIYVSIGKKASTI 212

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
              ++     D L  +V++ A + +S  ++  AP +   I E+F   G + L+I D +++
Sbjct: 213 ASIVKLLEENDALSYTVILTANASDSAAMQVFAPFSGTAIGEFFRDTGRSALIIYDDLSK 272

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE------------------ 303
            A + REI+      P    YP  +F    RLLER      +                  
Sbjct: 273 QAVAYREISLLLRRPPGREAYPGDIFYLHSRLLERSSKIISDNKIASKMNDVPKSIEKKI 332

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
              G++T++  +     + +  I  +V SI DG I L  +L   G  P ++   SVSR+ 
Sbjct: 333 LGGGSLTSLPIIETQFGDVSSYIPTNVISITDGQIFLETNLFNSGIRPAINEGISVSRVG 392

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     KK+  +      +F E         +   +D      + +     + LKQS 
Sbjct: 393 ASAQIKSMKKISGTFKLDQAQFRELE---SFSQFGSDLDSTTKNIIEKGKRNIEILKQSI 449

Query: 422 S 422
           +
Sbjct: 450 N 450


>gi|254255070|ref|ZP_04948387.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
 gi|124899715|gb|EAY71558.1| Flagellar biosynthesis/type III secretory pathway ATPase
           [Burkholderia dolosa AUO158]
          Length = 476

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 156/425 (36%), Positives = 235/425 (55%), Gaps = 8/425 (1%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76
            +  Q G +  ++ +    T        G     +  + + +  +V+    D+  + P  
Sbjct: 56  PVATQVGRLIGVSGILLQATGYPFET--GANARIETASGEWIDARVVGFRDDVTQLMPFR 113

Query: 77  IGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G  V   G  R ++  A W GR+++ +G+P DG   L  GD  +++       
Sbjct: 114 APAGLFAGARVMPAGAGRQLTIGAAWRGRIVDGMGEPFDGGGPL-TGDAPLDLRPPRINP 172

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           M ++ V      G+R I+    +  GQR+G+FAGSG+GKS LL M  R    D V++ L+
Sbjct: 173 MKKRPVAGVLDVGVRAINGMLTIGRGQRVGLFAGSGVGKSVLLGMITRQTAADVVVVGLI 232

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREVREF+E  LG D ++K++VVVA +DESP++R MA      IA +F  +GDNVLL
Sbjct: 233 GERGREVREFVEHALGPDGMRKAIVVVAPADESPLMRLMATELCHAIAAHFRDRGDNVLL 292

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TR+A + RE+A   GE P  +GYP SVF  LP L+ER G  E   G+++A+ +VL
Sbjct: 293 LVDSLTRYAMAQRELALALGEPPATKGYPPSVFGMLPALVERAGNGEGS-GSMSAIYTVL 351

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +GD+  DP+ D+ R+ILDGHI+L+R LA +G YP +D   SVSR      S+ +    S
Sbjct: 352 AEGDDEQDPVVDTARAILDGHIMLSRELAAQGHYPAIDVTRSVSRCMSLVASSAQCAAAS 411

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEI 433
            L  L+ R  + RD+  +GGY  G D   D+AV   P I  FL Q+  D +   D   ++
Sbjct: 412 ELKDLLSRHVQVRDLIPLGGYVAGADPATDRAVELHPRIAAFLSQAQGDAAPYDDTVAQM 471

Query: 434 TKKLQ 438
              L+
Sbjct: 472 LALLE 476


>gi|289435790|ref|YP_003465662.1| ATP synthase F1, beta subunit [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172034|emb|CBH28580.1| ATP synthase F1, beta subunit [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 473

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 176/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            I++  D+V    +   + +  G  V   G    +       GRV N LG  ID D+ L 
Sbjct: 51  AIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                 +I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 SDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  L+ R++E +DI  I G     D    ++V +   + 
Sbjct: 349 STSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDELSDED-KQSVSRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|116873893|ref|YP_850674.1| F0F1 ATP synthase subunit beta [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466611|sp|A0ALL3|ATPB2_LISW6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|116742771|emb|CAK21895.1| ATP synthase F1, beta subunit [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 473

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 176/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            I++  D+V    +   + +  G  V   G    +       GRV N LG  ID D+ L 
Sbjct: 51  AIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                 +I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 SDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  L+ R++E +DI  I G     D    ++V +   + 
Sbjct: 349 STSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDELSDED-KQSVSRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|14718119|gb|AAK72799.1| ATP synthase beta subunit [Malesherbia linearifolia]
          Length = 467

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/398 (27%), Positives = 176/398 (44%), Gaps = 29/398 (7%)

Query: 45  LGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRI 95
             D VV   K  D +G+ I +  ++        V    +   + ++ G  V   G    +
Sbjct: 21  YNDLVV---KGRDIIGKQINVTCEVQQLLGNNRVRXVAMSATDGLTRGMEVIDTGAPLSV 77

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GR+ N LG+P+D    +  G  S  I    P  +        F+TGI+V D+ 
Sbjct: 78  PVGGATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQSDTKLSIFETGIKVXDLL 136

Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGD 212
            P   G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +    
Sbjct: 137 APHRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 196

Query: 213 N--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263
                      K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF 
Sbjct: 197 GVINEENITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 256

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP
Sbjct: 257 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 314

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHR 382
              +  + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R
Sbjct: 315 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQR 374

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++E +DI  I G     +      V +   I  FL Q 
Sbjct: 375 YKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 411


>gi|13236720|gb|AAK14665.1| ATP synthase beta subunit [Sabal domingensis]
          Length = 497

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDAGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|223585571|gb|ACM91675.1| F1F0-ATP synthase beta subunit [Fenneropenaeus chinensis]
          Length = 525

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 189/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G + ++      V    +   + + +    ++   + +V   +  + V    +   E
Sbjct: 55  VPNGSVVAVIGAVVDVQFDGELPPILNALEVANRSPRLVLEVAQHLGENTVRTIAMDGTE 114

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G+ V   G    I       GR+IN +G+PID    +     S  I ++ P  +  
Sbjct: 115 GLIRGNAVVDTGSPISIPVGPGTLGRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEM 173

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 174 SVEQEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 233

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 234 GERTREGNDLCHEMIESGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQ 293

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 294 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSI 351

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S+SR+ D     
Sbjct: 352 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIG 411

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  S+  ++   +  +DI  I G     +      V +   I  FL Q 
Sbjct: 412 HEHYNVARSVQKILQDHKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 464


>gi|16804567|ref|NP_466052.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes EGD-e]
 gi|46908701|ref|YP_015090.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47094108|ref|ZP_00231832.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|47096952|ref|ZP_00234528.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|217963368|ref|YP_002349046.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23]
 gi|224499882|ref|ZP_03668231.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes Finland
           1988]
 gi|224503231|ref|ZP_03671538.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL R2-561]
 gi|226225077|ref|YP_002759184.1| H+-transporting ATP synthase chain beta [Listeria monocytogenes
           Clip81459]
 gi|254825348|ref|ZP_05230349.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J1-194]
 gi|254828104|ref|ZP_05232791.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           N3-165]
 gi|254831048|ref|ZP_05235703.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 10403S]
 gi|254853942|ref|ZP_05243290.1| atpD [Listeria monocytogenes FSL R2-503]
 gi|254900333|ref|ZP_05260257.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes J0161]
 gi|254932229|ref|ZP_05265588.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes
           HPB2262]
 gi|254937809|ref|ZP_05269506.1| ATP synthase F1 [Listeria monocytogenes F6900]
 gi|254994238|ref|ZP_05276428.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-064]
 gi|255025914|ref|ZP_05297900.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-003]
 gi|255519775|ref|ZP_05387012.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J1-175]
 gi|284802967|ref|YP_003414832.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578]
 gi|284996108|ref|YP_003417876.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923]
 gi|290892692|ref|ZP_06555684.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J2-071]
 gi|300764971|ref|ZP_07074959.1| ATP synthase F1, beta subunit [Listeria monocytogenes FSL N1-017]
 gi|81830121|sp|Q71WP9|ATPB2_LISMF RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|81849742|sp|Q8Y4C1|ATPB2_LISMO RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP
           synthase F1 sector subunit beta 2; AltName:
           Full=F-ATPase subunit beta 2
 gi|16412017|emb|CAD00607.1| atpD [Listeria monocytogenes EGD-e]
 gi|46881973|gb|AAT05267.1| ATP synthase F1, beta subunit [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47014662|gb|EAL05619.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47017515|gb|EAL08324.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b
           H7858]
 gi|217332638|gb|ACK38432.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23]
 gi|225877539|emb|CAS06253.1| Putative H+-transporting ATP synthase chain beta [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258600489|gb|EEW13814.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           N3-165]
 gi|258607331|gb|EEW19939.1| atpD [Listeria monocytogenes FSL R2-503]
 gi|258610413|gb|EEW23021.1| ATP synthase F1 [Listeria monocytogenes F6900]
 gi|284058529|gb|ADB69470.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578]
 gi|284061575|gb|ADB72514.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923]
 gi|290557752|gb|EFD91274.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J2-071]
 gi|293583786|gb|EFF95818.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes
           HPB2262]
 gi|293594591|gb|EFG02352.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL
           J1-194]
 gi|300514271|gb|EFK41330.1| ATP synthase F1, beta subunit [Listeria monocytogenes FSL N1-017]
 gi|307572056|emb|CAR85235.1| ATP synthase F1, beta subunit [Listeria monocytogenes L99]
 gi|328465133|gb|EGF36401.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 1816]
 gi|328471139|gb|EGF42043.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 220]
 gi|332312959|gb|EGJ26054.1| ATP synthase subunit beta [Listeria monocytogenes str. Scott A]
          Length = 473

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 176/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            I++  D+V    +   + +  G  V   G    +       GRV N LG  ID D+ L 
Sbjct: 51  AIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                 +I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 SDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  L+ R++E +DI  I G     D    ++V +   + 
Sbjct: 349 STSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDELSDED-KQSVSRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|154424875|emb|CAL18540.1| ATP synthase alpha subunit [Streptococcus gallolyticus]
          Length = 367

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 154/367 (41%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AFGMAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   + K   +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDI-KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDTLGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|20384957|gb|AAM19145.1| ATP synthase beta subunit [Nitella praelonga]
          Length = 402

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGIPLSVPVGETTLGRIFNVLGEPVDNLGPVNTS- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDNISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEY       +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYLRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|20269444|gb|AAM17949.1| ATP synthase beta subunit [Camellia sinensis]
          Length = 394

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V        +       GR
Sbjct: 8   KGXDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTEAPLSVPVGGATLGR 67

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 68  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 126

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 127 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 186

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 187 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 246

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 247 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 304

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 305 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 364

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +      FL Q 
Sbjct: 365 ILGLDELSEED-RLTVARARKXERFLSQP 392


>gi|68139367|gb|AAY86048.1| ATP synthase beta subunit [Hortonia floribunda]
          Length = 456

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGRDTGGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|16330679|ref|NP_441407.1| F0F1 ATP synthase subunit beta [Synechocystis sp. PCC 6803]
 gi|114570|sp|P26527|ATPB_SYNY3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|47516|emb|CAA41137.1| ATPase subunit beta [Synechocystis sp. PCC 6803]
 gi|1653171|dbj|BAA18087.1| ATP synthase b subunit [Synechocystis sp. PCC 6803]
          Length = 483

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 113/422 (26%), Positives = 191/422 (45%), Gaps = 25/422 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYI 72
               G I+ +          S  +  + + +  QG+NS         +V ++  D  V  
Sbjct: 7   ATNVGKITQVIGPVIDAQFPSGKLPRIYNALKVQGRNSAGNEVAVTCEVQQLLGDNQVRA 66

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G    +       GR+ N LG+P+D    +  G+ +  I   
Sbjct: 67  VAMSSTDGLVRGMDVVDTGAPISVPVGTGTLGRIFNVLGEPVDNKGPVPAGE-TFPIHRP 125

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  ++ +   + F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       
Sbjct: 126 APKLVDLETKPQVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGG 185

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   + +  N          K  +V    +E P  R    LTA+T
Sbjct: 186 VSVFGGVGERTREGNDLYNEMIESNVINADKPEESKIALVYGQMNEPPGARMRVGLTALT 245

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  
Sbjct: 246 MAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI-- 303

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S 
Sbjct: 304 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLDSTST 363

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +   +    +       +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 364 MLQPSIVGSEHYDTAREVQSTLQRYKELQDIIAILGLDELSEED-RLTVDRARKIERFLS 422

Query: 419 QS 420
           Q 
Sbjct: 423 QP 424


>gi|325295434|ref|YP_004281948.1| ATP synthase subunit beta [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065882|gb|ADY73889.1| ATP synthase subunit beta [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 481

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 177/374 (47%), Gaps = 12/374 (3%)

Query: 55  NSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKP 112
             D + +V  ++    V     G  E +  G  V   G   ++       GR+ N +G+P
Sbjct: 48  TGDLMLEVHQQLGEGRVRCVAFGATEGLKRGMEVIDTGDYLKVPVGHATRGRIFNVVGEP 107

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           ID    + + +    I    PP   ++   + F+TGI+VID+  P   G + G+F G+G+
Sbjct: 108 IDEQGPV-EAEEYWPIHRPTPPLTEQKSTAEIFETGIKVIDLLEPYAKGGKTGLFGGAGV 166

Query: 173 GKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESP 228
           GK+ LL     +         + + VGER RE  +   +     +   +V+V    +E P
Sbjct: 167 GKTVLLMELIHNVAMKHGGFSVFAGVGERTREGTDLWLEMKESGVLPNTVLVYGQMNEPP 226

Query: 229 ILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             R    +T VT+AEYF      +VL  +D++ RF  +  E++   G +P   GY  ++ 
Sbjct: 227 GNRWRVAMTGVTMAEYFRDVEGRDVLFFVDNMFRFIQAGSEVSALLGRIPSEVGYQPTLS 286

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           +E+  + ERI  +   KG+IT+V ++ V  D+  DP   ++ + LD   VL+R+LAE+G 
Sbjct: 287 TEVGAIQERI--TSTNKGSITSVQAIYVPADDFTDPAPFTLFAHLDATTVLSRALAEQGI 344

Query: 348 YPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           YP VDPL S SR+ D     +   ++   +   + R++E  +I  I G     +      
Sbjct: 345 YPAVDPLESTSRMLDPQIVGERHYRVAREVQRYLQRYKELLEIIAILGMEELSEED-KLV 403

Query: 407 VHQVPIIYDFLKQS 420
           VH+   I  FL Q 
Sbjct: 404 VHRARRIQLFLTQP 417


>gi|241912846|gb|ACS72101.1| AtpB [Exalaria parviflora]
          Length = 489

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V Q  + D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIQ--SRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVDICTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|237749342|ref|ZP_04579822.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
 gi|229380704|gb|EEO30795.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13]
          Length = 458

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 169/362 (46%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G ++ + G    +       GR++N LG PID    +   D
Sbjct: 45  LGDGVVRTIALGSSDGLRRGMVIQNTGNPIMVPTGEATLGRIMNVLGDPIDEQGPIATED 104

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 105 -RASIHRKAPAYDELSPSQEILETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIN 163

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +F  +    N+  K  +V    +E P  R    LT +
Sbjct: 164 NIAKQHSGLSVFAGVGERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGL 223

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  
Sbjct: 224 TIAESFRDQGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITS 283

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +     +IT++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 284 TTTG--SITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSR 341

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +  +    +  ++ R++E RDI  I G    +       V +   +  FL 
Sbjct: 342 QLDPLVVGEEHYQTARQVQGILQRYKELRDIIAILGMDE-LAPEDKLVVARARKMQRFLS 400

Query: 419 QS 420
           Q 
Sbjct: 401 QP 402


>gi|296127003|ref|YP_003634255.1| ATP synthase F1, alpha subunit [Brachyspira murdochii DSM 12563]
 gi|296018819|gb|ADG72056.1| ATP synthase F1, alpha subunit [Brachyspira murdochii DSM 12563]
          Length = 499

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/409 (25%), Positives = 169/409 (41%), Gaps = 18/409 (4%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                V  L  +V   + ++ +   S  +G    +  + +    +G    I  G  V   
Sbjct: 36  DGIARVIGL-PHVMANEMILFE---SGAVGLAFNLEEETIGAIVLGDYYGIKEGSKVSRL 91

Query: 91  GRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            R   +       GRV+N LG PIDG   +   D    I    P   +RQ V++  +TGI
Sbjct: 92  KRILEVPVGEALLGRVVNPLGVPIDGHGEV-ATDKRRVIEFPAPGIADRQAVKQPLQTGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           + ID  TP+  GQR  +    G GK+   L ++  +       +   +G++   V   ++
Sbjct: 151 KAIDSMTPVGRGQRQLIIGDRGTGKTSIALDAIINQKGTGVICVYVAIGQKASTVAGVVD 210

Query: 208 DYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL-LILDSITRFAHS 265
                     ++VV AT+ +S  L  +AP     +AEYF  +      +I D +T+ A++
Sbjct: 211 TLRQHGALDYTIVVAATAADSAPLLYIAPYAGCAMAEYFMYEQKKDTLIIYDDLTKQANA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDP 323
            R+I+      P    +P  VF    RLLER      E   G++TA+  +    +  +  
Sbjct: 271 YRQISLLLRRPPGREAFPGDVFYLHSRLLERAAKLSDELGGGSLTALPIIETQDNEVSAY 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           I  +V SI DG I L  SL   G  P +D   SVSR+   A +   KK+  +L   +  +
Sbjct: 331 IPTNVISITDGQIYLLTSLFMSGVRPAIDVGISVSRVGGNAQTKAMKKVAGTLRLDLASY 390

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
                   +G    G+D      + +   + + LKQ      S   F+E
Sbjct: 391 RSLEAFSQLGI---GLDKATLAQLDRGAKMVELLKQKQY---SPIPFEE 433


>gi|158602253|gb|ABW74593.1| ATP synthase beta subunit [Anemonopsis macrophylla]
          Length = 476

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFLDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|13236712|gb|AAK14661.1| ATP synthase beta subunit [Livistona speciosa]
          Length = 498

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVV--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TG +V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGXKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  S LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5001587|gb|AAD37040.1|AF092114_1 ATP synthase beta subunit [Sarcandra glabra]
          Length = 474

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 26  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 86  IFNVLGXPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 145 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLTVARARKIERFLSQP 410


>gi|332017324|gb|EGI58074.1| ATP synthase subunit beta, mitochondrial [Acromyrmex echinatior]
          Length = 489

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 187/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +  Q +    + +V   +  + V    +   E + 
Sbjct: 55  GKVVAVIGAVVDVQFDDALPPILNALEVQNRTPRLVLEVAQHLGENTVRTIAMDGTEGLV 114

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   RI   A   GR+IN +G+PID    +   D    I +  P  ++    
Sbjct: 115 RGQNVLDSGFPIRIPVGAETLGRIINVIGEPIDERGPI-ATDKVAPIHADAPEFVHMSVE 173

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 174 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 233

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 234 TREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 293

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 294 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 351

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      + 
Sbjct: 352 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 411

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 412 YNIARDVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 461


>gi|42559022|gb|AAS20197.1| ATP synthase beta subunit [Elegia fenestrata]
          Length = 478

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVVFPPGKLPNIYNALVIKG--RDIVGQQIYVTCEVQQLLGNNRVRTVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATEGLMRGMEVIDTGAPLSVPVGKATLGRIFNVLGEPVDNLGPVDTS-ATSPIHRSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +K +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKKASITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPQIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 420


>gi|37543315|gb|AAL92722.1| ATP synthase beta subunit [Coleochaete sp. 40D2]
          Length = 391

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 162/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + I  G  V   G    +       GR+ N LG+P+D    +    LS  I
Sbjct: 1   VRAVSMSATDGIMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDTTKLS-PI 59

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 60  HRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 119

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 120 HGGVSVFGGVGERTREGNDLYMEMKESKVINSDNISESKVALVYGQMNEPPGARMRVGLT 179

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 180 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQER 239

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 240 I--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 297

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +       +   + R++E +DI  I G     +      V +   I  
Sbjct: 298 TSTMLQPWIVGEEHYDTAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARARKIER 356

Query: 416 FLKQS 420
           FL Q 
Sbjct: 357 FLSQP 361


>gi|301632657|ref|XP_002945398.1| PREDICTED: ATP synthase subunit beta-like [Xenopus (Silurana)
           tropicalis]
          Length = 469

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 183/413 (44%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           VQG  +  I +V        Q   + D +   G       Q  ++   +V    +G  + 
Sbjct: 4   VQGKIVQCIGAVVDVEFPRDQMPKVYDALKLDGSALTLEVQ-QQLGDGVVRTIALGSSDG 62

Query: 81  ISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G +V +      +       GR+++ LG PID    + +  L   I  K P      
Sbjct: 63  LKRGIMVTNTANPITVPVGKATLGRIMDVLGNPIDERGPVDQT-LRASIHRKAPAYDELS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 122 PSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +F  +               K  +V    +E P  R    LT +TIAE F  +
Sbjct: 182 ERTREGNDFYHEMADSGVVNLENLGESKVSMVYGQMNEPPGNRLRVALTGLTIAESFRDE 241

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
           G +VL  +D+I R+  +  E++   G +P A GY  ++  E+ RL ERI  +  + G+IT
Sbjct: 242 GRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSIT 299

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR  D      
Sbjct: 300 SIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGE 359

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +   + R++E RDI  I G    +       V +   I  FL Q 
Sbjct: 360 EHYRVARDVQGTLQRYKELRDIISILGMDE-LAPEDKLVVARARKIQRFLSQP 411


>gi|241912892|gb|ACS72124.1| AtpB [Prescottia oligantha]
          Length = 489

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|148887707|gb|ABR15430.1| ATP synthase beta subunit [Biebersteinia heterostemon]
          Length = 473

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R +E +DI  I G     +   D  V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKETLQRXKELQDIIAILGLDELSEED-DLTVARAXXIVRFLSQP 420


>gi|14718271|gb|AAK72873.1| ATP synthase beta subunit [Zostera noltii]
          Length = 477

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 179/418 (42%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVV----HQGKNSDNLGQVIRINLDI-VYICPVG 76
           G I  I      V      +       VV      G+ S+   +V ++  +  V    + 
Sbjct: 8   GRIVQIIGPVLDVAFPPGNMPNIYNALVVKSRDSDGQPSNVTCEVQQLLGNNRVRAVAMS 67

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +  G  S  I    P  
Sbjct: 68  ATDGLTRGMAVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPTF 126

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+             +S+ 
Sbjct: 127 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINXIAKAHGGVSVF 186

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AZY
Sbjct: 187 GGVGERTREGNDLYMEMKESGVINKDKIAESKVALVYGQMNEPPGARMRVGLTALTMAZY 246

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 247 FRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 304

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 305 QGSITSIQAVYVPADDLTDPAPAXTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 364

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R +E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 WIVGEEHYEIAQRVKETLQRNKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|261838460|gb|ACX98226.1| ATP synthase F1 beta chain [Helicobacter pylori 51]
          Length = 469

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGTQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+      S    +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMISEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|159161266|ref|YP_001542544.1| ATP synthase CF1 beta subunit [Cuscuta exaltata]
 gi|190358663|sp|A8W3D7|ATPB_CUSEX RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|158938691|gb|ABW83708.1| ATP synthase CF1 beta subunit [Cuscuta exaltata]
          Length = 490

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V +G++++ +    +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTEQMNVTCEVQQLLGNNRVRAVAMNDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDMGTPITVPVGGSTLGRIFNVLGEPVDNFGPVD-TNTTSTIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|89242528|gb|ABD64622.1| ATPase beta subunit [Hortonia floribunda]
          Length = 436

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTGGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVHGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|14718001|gb|AAK72742.1| ATP synthase beta subunit [Chamaelirium luteum]
          Length = 492

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ + +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFTPGKMPNIYNALVVKG--RDTVGQQMNVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 434


>gi|296125411|ref|YP_003632663.1| ATPase, FliI/YscN family [Brachyspira murdochii DSM 12563]
 gi|296017227|gb|ADG70464.1| ATPase, FliI/YscN family [Brachyspira murdochii DSM 12563]
          Length = 485

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 162/446 (36%), Positives = 250/446 (56%), Gaps = 19/446 (4%)

Query: 3   KNLETLAQLAEDYSK--------NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQG 53
           +N++ + ++ + + K         L+   G +  +            +  LGD   ++  
Sbjct: 5   ENVDFIKEVRKTFDKYRKVVDDVALLKSYGKVKEVIGSLVISEG--PFCKLGDMCRIYMN 62

Query: 54  KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKP 112
            ++    + I      V +   G    I+ G++V+ + R   +       G V++A GKP
Sbjct: 63  DDTYLDAEAIGFRNQDVLLATYGPVNGITFGNMVYSFERPLSVMCCDEILGTVLDARGKP 122

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           + G       +  + +       MNR R++K  +TG+R ID    +  GQR+ + +G+G+
Sbjct: 123 LAGGGH-NFYETPVAVSHNAVNPMNRPRIKKHIQTGVRAIDGLLTVGQGQRMAIMSGTGV 181

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILR 231
           GKSTLLSM AR+   D  +I+L+GER REVR+FI  D   + LK+SV+VVATSD++P+LR
Sbjct: 182 GKSTLLSMIARNTNADVNVIALIGERRREVRDFIERDLGEEGLKRSVLVVATSDDAPLLR 241

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
             A  TA TIAEYF  KG NV+ ++DS+TRFA + REI  + GE P  RGY  SVFSEL 
Sbjct: 242 VRAAYTATTIAEYFRDKGKNVMFMVDSVTRFALAQREIGLSRGEPPTTRGYTPSVFSELA 301

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           +LLER G S K  G ITA  +VLV+GD+ ++PI D+VR ILDGHIVL+R LA  G +P +
Sbjct: 302 KLLERTGTSNK--GTITAFYNVLVEGDDLDEPITDTVRGILDGHIVLSRDLANRGHFPAI 359

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D   S+SR+ ++  S   KK       +   + E +++ +IGGY  G    +D+A+   P
Sbjct: 360 DVNKSISRIMNEVVSNMHKKAAREFLKMSADYNEAKELIMIGGYAKGSMPEVDRAIDYKP 419

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
           ++  +L+Q   ++SS   F +  + L
Sbjct: 420 MMDRYLQQDVYEVSS---FADSKEAL 442


>gi|114509222|gb|ABI75179.1| ATPase alpha subunit [Posidonia australis]
          Length = 363

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 19/367 (5%)

Query: 34  YTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF 93
             V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G  
Sbjct: 1   ARVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSI 56

Query: 94  RISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152
              P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +
Sbjct: 57  VDVPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAV 115

Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREV 202
           D   P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V
Sbjct: 116 DSLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAMAKENAKLYCVYVAIGQKRSTV 175

Query: 203 REFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++
Sbjct: 176 AQLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCALGEYFLDNGMHALIIYDDLSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    
Sbjct: 296 VSAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLE 355

Query: 380 IHRFEET 386
           + ++ E 
Sbjct: 356 LAQYREV 362


>gi|63253195|dbj|BAD98370.1| beta subunit of ATP synthesis [Davallia epiphylla]
          Length = 464

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +            +  K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESRVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEDD-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|4206578|gb|AAD11720.1| ATP synthase beta subunit [Severinia buxifolia]
          Length = 474

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 10  GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVACEVQQLLGNNRVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 70  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 129 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 189 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|323148913|ref|YP_004222468.1| ATP synthase CF1 beta subunit [Smilax china]
 gi|308742604|gb|ADO33455.1| ATP synthase CF1 beta subunit [Smilax china]
          Length = 498

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRVAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSSP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|150187338|emb|CAK30231.1| ATP synthase alpha subunit [Streptococcus infantis ATCC 700779]
          Length = 366

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 161/370 (43%), Gaps = 13/370 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSA 99
           +    G+ ++ +  +    G    +    V I  +G   +I  GD +   G+   +    
Sbjct: 4   ENAMSGELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGD 60

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+ 
Sbjct: 61  SLIGRVVDPLGRPVDGLGPIN-TDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIG 119

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KK 216
            GQR  +      GK+T+      +        I   +G++   VR  +E          
Sbjct: 120 RGQRELIIGDRQTGKTTIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDY 179

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      
Sbjct: 180 TIVVTASASQPSPLLFLAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRP 239

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG
Sbjct: 240 PGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDG 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E         
Sbjct: 300 QIFLSDSLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTK 356

Query: 395 YRPGVDLILD 404
           +   +D    
Sbjct: 357 FGSDLDAATQ 366


>gi|254387512|ref|ZP_05002751.1| ATP synthase subunit alpha [Streptomyces clavuligerus ATCC 27064]
 gi|294815101|ref|ZP_06773744.1| ATP synthase subunit alpha [Streptomyces clavuligerus ATCC 27064]
 gi|326443463|ref|ZP_08218197.1| F0F1 ATP synthase subunit alpha [Streptomyces clavuligerus ATCC
           27064]
 gi|197701238|gb|EDY47050.1| ATP synthase subunit alpha [Streptomyces clavuligerus ATCC 27064]
 gi|294327700|gb|EFG09343.1| ATP synthase subunit alpha [Streptomyces clavuligerus ATCC 27064]
          Length = 532

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 172/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G +S        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQSYQPDAASREEVGTVSLAGDGIAKVEGL-PSAMANELLRFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAIILGEFSGIEEGQSVTRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 TGRRALELQAPTVMQRKSVHEPMETGYKAVDAMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDVNKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + +F E       G     +D     ++ +
Sbjct: 368 ALNVGISVSRVGGSAQHKAMRQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKASLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ+    + +ED    +  
Sbjct: 425 GKRMVELLKQAQYQPMRTEDQVVSVWA 451


>gi|63091903|emb|CAH58803.1| ATP synthase alpha chain [Enterococcus sulfureus]
          Length = 367

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 154/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFANGS---FGMAQNLESNDVGIIILGDFESIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N+LG+PIDG   + K   +  + +  P  M R+ V++  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNSLGQPIDGLGDI-KTTRTRPVEAAAPGVMQRKSVDEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTSIAIDTIINQKGQDMICIYVAIGQKDSTVRAQVETLRR 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   +  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPMLYIAPYAGAAMGEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGIRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|61196970|gb|AAX39470.1| ATP synthase beta subunit [Tolypella nidifica]
 gi|61196972|gb|AAX39471.1| ATP synthase beta subunit [Tolypella porteri]
          Length = 402

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVVDTGLPLNVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDNISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYDTAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|157285117|gb|ABV31298.1| ATPase [Vibrio mytili]
          Length = 415

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 174/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLREGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ L      +  D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQIGKTALAIDSIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALQNTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     ++              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEDYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|63091937|emb|CAH58826.1| ATP synthase alpha chain [Enterococcus casseliflavus]
          Length = 367

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 152/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  G  V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGXKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + + D S  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGPI-ETDKSRPVEAAAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+T+      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTTIAIDAIINQKGQDMICIYVAIGQKDSTVRAQVETLRR 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPLLYIAPYAGAAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYSGVRPAVAAGLSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|7688021|emb|CAB89715.1| ATP synthase beta subunit [Laurus nobilis]
          Length = 498

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVRQQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|299821861|ref|ZP_07053749.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Listeria
           grayi DSM 20601]
 gi|299817526|gb|EFI84762.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Listeria
           grayi DSM 20601]
          Length = 473

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            I++  D+V    +   + I  G  V        +       GRV N LG+ ID D+ + 
Sbjct: 51  AIQLGDDVVRTIAMESTDGIQRGMAVRDTESPITVPVGNITLGRVFNVLGETIDLDEPIA 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                 +I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADIQRNKIHRPAPTFDELATKTEILETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTIAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  L+ R+ E +DI  I G     D     AV +   + 
Sbjct: 349 STSRALSPEIVGEEHYNIATGVQRLLQRYRELQDIIAILGMDELSDED-KLAVSRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|325117227|emb|CBZ52779.1| ATP synthase subunit beta, related [Neospora caninum Liverpool]
          Length = 561

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 188/419 (44%), Gaps = 26/419 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    Q   + + +  QG ++  + +V   +  + V    +   E + 
Sbjct: 84  GRITQVIGAVVDVHFDEQLPPILNSLEVQGHSNRLVLEVAQHLGENTVRTIAMDATEGLV 143

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR++N +G+P+D    +     +  I    P   ++   
Sbjct: 144 RGQKVVDTGAPIQVPVGVETLGRIMNVIGEPVDECGPV-PAKKTYSIHRAAPLFADQSTE 202

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
               +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 203 PGLLQTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVANKHGGFSVFAGVGER 262

Query: 199 GREVREFIEDYLGDNL---------------KKSVVVVATSDESPILRKMAPLTAVTIAE 243
            RE  +   + +   +                K+ +V    +E P  R    LTA+++AE
Sbjct: 263 TREGNDLYHEMMTTGVIKRKKLEDGKFDFTGSKAALVYGQMNEPPGARARVALTALSVAE 322

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++L +L ERI  +  
Sbjct: 323 YFRDEQGQDVLLFIDNIYRFTQAGSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTT 380

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA- 361
           +KG+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+  
Sbjct: 381 KKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLA 440

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +    +      +   L+  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 441 PEIVGQEHYDTARATQKLLQDYKSLQDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 498


>gi|269103803|ref|ZP_06156500.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163701|gb|EEZ42197.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 468

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 184/418 (44%), Gaps = 24/418 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +  G I  I      V      V  + D +    K    L  V+     +   +V    +
Sbjct: 1   MATGKIVQIIGAVVDVEFPQDSVPQVYDALHVDAKEQGTL--VLEVQQQLGGGVVRGIAM 58

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  + +  G  V + GR   +       GR++N LG  ID    +G+ +    I    P 
Sbjct: 59  GTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGDAIDERGDIGEEE-RYAIHRAAPS 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         +
Sbjct: 118 YEEQSNTTEMLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAIQHSGLSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +F  +               K  +V    +E P  R    LT +T+AE
Sbjct: 178 FAGVGERTREGNDFYFEMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMAE 237

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 238 KFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP +DPL S SR+ D 
Sbjct: 296 SGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +   +   +  ++ R++E +DI  I G     +     +V +   I  FL Q 
Sbjct: 356 LVVGQEHYDIARGVQSILQRYKELKDIIAILGMDELSEDD-KLSVSRARKIERFLTQP 412


>gi|255263993|ref|ZP_05343335.1| ATP synthase F1, beta subunit [Thalassiobium sp. R2A62]
 gi|255106328|gb|EET49002.1| ATP synthase F1, beta subunit [Thalassiobium sp. R2A62]
          Length = 477

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 187/420 (44%), Gaps = 20/420 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I+ +      V        + + +         + +V   +  + V    +   E
Sbjct: 6   AATGKITQVIGAVVDVQFEGDLPEILNSLNTDNNGKKLVLEVAQHLGENTVRAIAMDSTE 65

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    +       GR++N +G+P+D    + K D    I +  P    +
Sbjct: 66  GLVRGQAVTDTGGPITVPVGNATLGRILNVVGEPVDEGAPV-KADEHRSIHADAPEFAEQ 124

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 125 STESVVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGV 184

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +   + +             K  +V    +E P  R    LT +T+AE F  
Sbjct: 185 GERTREGNDLYHEMIESGVIVPDNLVDSKVALVYGQMNEPPGARMRVALTGLTLAEQFRD 244

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  + G+
Sbjct: 245 QSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKSGS 302

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SRL D +  
Sbjct: 303 ITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLMDPSIV 362

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +  ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 GAEHYQVARDVQGILQRYKSLQDIIAILGMDELSEDD-KLTVARARKIERFLSQ-PFDVA 420


>gi|63091839|emb|CAH58770.1| ATP synthase alpha chain [Streptococcus thermophilus]
 gi|150187197|emb|CAK30193.1| ATP synthase alpha subunit [Streptococcus thermophilus]
 gi|154424873|emb|CAL18539.1| ATP synthase alpha subunit [Streptococcus thermophilus]
 gi|154424885|emb|CAL18545.1| ATP synthase alpha subunit [Streptococcus thermophilus]
          Length = 367

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---VFGMAQNLESNDVGIIILGDFYTIREGDEVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + K   +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPIDGLGDI-KTTATRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+   + ++  +       I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDVICIYVAIGQKESTVRTQVETLRKHGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|20467351|gb|AAL27806.1| ATPase beta subunit [Encephalartos villosus]
          Length = 444

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 102/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ IR+  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 21  KGQDMAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 80

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 81  IFNVLGEPVDNLGPVD-ARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 139

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL------- 214
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +     +       
Sbjct: 140 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDIS 199

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+ EYF       VLL +D+I RF  +  +++  
Sbjct: 200 GSKVALVYGQMNEPPXARMRVGXTALTMXEYFRXVXXQXVLLFIDNIFRFVQAGSKVSAL 259

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
              +P   GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 260 LXXMPSXVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 317

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 318 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 377

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 378 ILGLDELSEED-RLTVARARKIERFLSQP 405


>gi|5001569|gb|AAD37031.1|AF092105_1 ATP synthase beta subunit [Hedera helix]
          Length = 488

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GNITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D          S  I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNXXXXXXXTTS-PIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|289449740|ref|YP_003475404.1| ATP synthase F1 subunit beta [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184287|gb|ADC90712.1| ATP synthase F1, beta subunit [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 466

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 12/413 (2%)

Query: 19  LVVQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +    G I++I+         +     + + +     +   + +V   I    V    +G
Sbjct: 1   MSTVCGKITAISGPVIDCEFPMHTLPKIKEAIKVTVNDETRIMEVAQHIGHGRVRCILLG 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G+   +       GR+ N LG  IDG+  L        I    P  
Sbjct: 61  SSEGMYRGMPVTSEGQGITVPVGKNILGRMFNVLGNTIDGEGDLPPETPQSPIHRTAPGF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             ++   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+ 
Sbjct: 121 AEQKPAAEILETGIKVIDLLEPYPKGGKIGLFGGAGVGKTVLIQELIHNVAMEHGGYSVF 180

Query: 195 --VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250
             VGER RE  +   +        K+ +V    +ESP +R    L  +T+AE+F      
Sbjct: 181 TGVGERSREGNDLWNEMRESGVSDKTALVFGQMNESPGVRMRVALAGLTMAEHFRDVDHK 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++T  G +P A GY  ++  E+  L ERI  +    G++T+V
Sbjct: 241 DVLLFIDNIFRFVQAGSEVSTLLGRMPSAVGYQPTLAEEMGALQERI--TSTRDGSVTSV 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            +V V  D+  DP   +  + LD   VL+R +AE+G YP VDPLAS SR+ + A   D  
Sbjct: 299 QAVYVPADDLTDPAPATTFTHLDATTVLSRQIAEQGIYPAVDPLASTSRILEPAVVGDEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
            ++   +  ++ +++E +DI  I G     +      V +   +  FL Q   
Sbjct: 359 YRVARKVQEILQKYKELQDIIAILGMDELSEDD-RITVIRARKVQRFLAQPTH 410


>gi|112791384|gb|ABI21962.1| ATP synthase beta subunit [Pectobacterium carotovorum subsp.
           odoriferum]
          Length = 421

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  +      + +V + +   IV    +G  + +  G  V +      +       GR
Sbjct: 3   DALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLDHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGDPIDMKGDIGEEE-RWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|86139477|ref|ZP_01058046.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. MED193]
 gi|85823980|gb|EAQ44186.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. MED193]
          Length = 442

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 167/441 (37%), Positives = 260/441 (58%), Gaps = 8/441 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M   L+ L +     SK L    G +S I+     ++ L +   +GD  V+ +G   +  
Sbjct: 1   MIPELKALTEQI--ASKKLATSMGRVSGISGGEIEISGLEREARIGDRLVLVRGPGDELH 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V++I+ + + + P    + +++ D V        +P   W GRVI+  G+P+DG   L
Sbjct: 59  GEVLKIDSNKISMLPDRSPDRVAINDRVKLMPAPDFAPGDNWIGRVIDPFGEPLDGR-PL 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G+ + ++M+  P A  R+ +     TG+ V +   P+  GQRIG+FAGSG+GKSTLL+
Sbjct: 118 LRGEKARDLMAPPPKAAGRRHMGARLDTGLSVFNTILPIVQGQRIGLFAGSGVGKSTLLA 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A+    D V+++L+GERGREV  F++D LG + +K++VVV ATSD+S ++R+ +   A
Sbjct: 178 KMAQFMQADVVVMALIGERGREVNHFVKDVLGPEGMKRAVVVAATSDQSALVRRRSAWAA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  +G NVL + DS+TRFA + REI+  SGE P  RG+P SV   +  L ER G
Sbjct: 238 MTIAEHFRDQGKNVLFMADSVTRFAEAHREISAASGEAPSLRGFPPSVTPLITGLCERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD   SVS
Sbjct: 298 PGSEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL- 417
           R    A + +E   +  +   +  +E++  +   G Y  G D++LD+AV   P +  F  
Sbjct: 358 RSLPAAATDEENATILEVRKFLGSYEQSEVMIRAGLYSEGNDVVLDQAVKIWPELDAFFG 417

Query: 418 KQSPSDLSSEDVFQEITKKLQ 438
           K+ P  +S  + F  +   L+
Sbjct: 418 KEDPQGVS--NSFSRLQLMLR 436


>gi|260858262|ref|YP_003232153.1| T3SS structure protein EscN [Escherichia coli O26:H11 str. 11368]
 gi|257756911|dbj|BAI28413.1| T3SS structure protein EscN [Escherichia coli O26:H11 str. 11368]
          Length = 446

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 154/409 (37%), Positives = 227/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I++I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKITNIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHISG 88

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P+  + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNITAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAE+F  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEFFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVF+ LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFASLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+      ++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+     I  F++QS  D+SS +
Sbjct: 387 IATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFIQQSTKDISSYE 435


>gi|237751193|ref|ZP_04581673.1| ATP synthase subunit beta [Helicobacter bilis ATCC 43879]
 gi|229372559|gb|EEO22950.1| ATP synthase subunit beta [Helicobacter bilis ATCC 43879]
          Length = 469

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/409 (26%), Positives = 194/409 (47%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I+ +      V   +    + + +        +    + +V   +  ++V    + + 
Sbjct: 5   GKITQVMGPVVDVEFENYLPEINEALDVNYKFDSEEKQLVLEVAAHLGDNVVRTIAMDMT 64

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G    +       GR+ N +G+ +D  + + K  +   I  + P   N
Sbjct: 65  EGLTRGQEVKARGAMIEVPVGEEVLGRIFNVIGEVVDDGEPV-KAAVKWPIHRESPSFDN 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 124 QSTKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAG 183

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 184 VGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  + G+IT+V +
Sbjct: 244 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV S LD   VLNR +AE+G YP VDPL S SR+ D      +  K
Sbjct: 302 VYVPADDLTDPAPASVFSHLDAKTVLNRKIAEKGIYPAVDPLDSSSRILDPQVVGEEHYK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  + G     +    + V +   I  FL Q 
Sbjct: 362 IATGIQQVLQKYKDLQDIIALLGMDELSEED-KRTVERARKIEKFLSQP 409


>gi|188527915|ref|YP_001910602.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Shi470]
 gi|188144155|gb|ACD48572.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Shi470]
 gi|308063917|gb|ADO05804.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Sat464]
          Length = 469

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEINGTQKSLVLEVAAHLGANRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +     V   G+   +       GR+ N +G+ ID  + L    L+  I  K P    
Sbjct: 66  EGLVRNQAVKARGKMIEVPVGEEVLGRIFNVVGESIDNLEPLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGSEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|38422324|emb|CAE45326.1| unnamed protein product [Magnetospirillum gryphiswaldense]
 gi|144898923|emb|CAM75787.1| F1-ATP synthase, beta subunit [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 474

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/434 (25%), Positives = 191/434 (44%), Gaps = 27/434 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
              G I+ +      V    Q   + +  +H   N + L  V+     +  + V    + 
Sbjct: 4   TNVGTITQVLGAVVDVRFEGQLPAILN-ALHTTNNGNLL--VLEVAQHLGENTVRAIAMD 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G   ++       GR++N +G PID    +G    +  I ++ P  
Sbjct: 61  STDGMVRGQEVTDTGSAIQMPVGPETLGRILNVIGDPIDERGPVGNT-QTRPIHAEAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           +++    +   TGI+VID+  P   G +IG+F G+G+GK+  +     +         + 
Sbjct: 120 IDQSTDAEILVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVTIMELINNVAKAHGGVSVF 179

Query: 193 SLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
           + VGER RE  +   + +   +        K  +V    +E P  R    L+ +T+AEYF
Sbjct: 180 AGVGERTREGNDLYHEMMESGVIKIDGPGSKVALVYGQMNEPPGARARVALSGLTVAEYF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +K
Sbjct: 240 RDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKK 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE   +P VDPL S SR  D  
Sbjct: 298 GSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEMAIFPAVDPLDSTSRALDPR 357

Query: 365 WSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              +E   +   +  ++  ++  +DI  I G     +      V +   I  FL Q    
Sbjct: 358 IVGEEHYGVAREVQRILQTYKSLQDIIAILGMDELSEED-KLVVTRARKIQRFLSQP--- 413

Query: 424 LSSEDVFQEITKKL 437
               +VF     KL
Sbjct: 414 FHVAEVFTGSPGKL 427


>gi|24940264|emb|CAD43398.1| ATP synthase beta subunit [Echiochilon pauciflorum]
          Length = 482

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 180/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 6   GRIVQIIGPVLXVAFPPGKMPNIYNALVVKGRDTXGQPNNVTCEVQQLLGNNRVRAVAMS 65

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 66  ATXGLTRGMEVIDTGAPXXVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L      +       +S+ 
Sbjct: 125 XQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLXMELINNIAKAHGGVSVF 184

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 185 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 244

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 245 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 302

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 303 AGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 362

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 RIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 419


>gi|103487769|ref|YP_617330.1| F0F1 ATP synthase subunit beta [Sphingopyxis alaskensis RB2256]
 gi|118573753|sp|Q1GQS5|ATPB_SPHAL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|98977846|gb|ABF53997.1| ATP synthase F1, beta subunit [Sphingopyxis alaskensis RB2256]
          Length = 513

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/420 (24%), Positives = 187/420 (44%), Gaps = 24/420 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I+ +      V    +   + + +      +  + +V   +  + V    +   +
Sbjct: 38  AATGRIAQVIGAVVDVQFTGELPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATD 97

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G  V   G +  +       GR++N +G+PID    +   D++  I +K P  +++
Sbjct: 98  GLTRGQPVRDTGAQISVPVGPQTLGRILNVIGEPIDERGPVN-SDMTAPIHAKAPEFVDQ 156

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 157 STEASILVTGIKVIDLIAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGV 216

Query: 196 GERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           GER RE  +   ++L   +              K  +V    +E P  R    L+ +T+A
Sbjct: 217 GERTREGNDLYHEFLDAGVIAKDADGNPTPDGSKVALVFGQMNEPPGARARVALSGLTMA 276

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 277 EYFRDQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TS 334

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V ++ V  D+  DP   +  + LD    L+R+++E G YP VDPL S SR+ 
Sbjct: 335 TTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVL 394

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             A    +  +    +   + +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 395 TPAIVGQEHYETARRVQETLQKYKSLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 453


>gi|319956203|ref|YP_004167466.1| ATP synthase f1 subcomplex beta subunit [Nitratifractor salsuginis
           DSM 16511]
 gi|319418607|gb|ADV45717.1| ATP synthase F1 subcomplex beta subunit [Nitratifractor salsuginis
           DSM 16511]
          Length = 468

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/410 (27%), Positives = 190/410 (46%), Gaps = 16/410 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQV-IRINLDIVYICPVGI 77
            G I  +      V        + + +      + K    + +V I++  + V    + +
Sbjct: 2   TGKIIQVMGPVVDVEFSDYLPEINEALETTLKTETKEQKLVLEVAIQLGDNRVRTIAMDM 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   ++       GR+ + +G  ID  + + +      I    P   
Sbjct: 62  TEGLVRGQEVRATGAPIKVPVGEEVLGRIFDVVGNVIDDGEPV-EAKTKWSIHRTPPAFD 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         + +
Sbjct: 121 VQSTKAEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELINNVAMKHSGYSVFA 180

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +
Sbjct: 181 GVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I RFA S  E++   G +P A GY  ++ SE+ +L ERI  +   KG+IT+V 
Sbjct: 241 VLMFIDNIFRFAQSGAEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTTKGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EK 370
           +V V  D+  DP   SV + LD   VLNRS+AE+G YP VDPL S SR+ D     D   
Sbjct: 299 AVYVPADDLTDPAPASVFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPVIIGDEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ ++++ +DI  I G     +      V +   +  FL Q 
Sbjct: 359 QVARGVQAILQKYKDLQDIIAILGMDELSEED-KLIVERARKVEKFLSQP 407


>gi|319893054|ref|YP_004149929.1| ATP synthase beta chain [Staphylococcus pseudintermedius HKU10-03]
 gi|317162750|gb|ADV06293.1| ATP synthase beta chain [Staphylococcus pseudintermedius HKU10-03]
 gi|323463891|gb|ADX76044.1| ATP synthase F1, beta subunit [Staphylococcus pseudintermedius
           ED99]
          Length = 470

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/410 (26%), Positives = 182/410 (44%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      +       L D        S  L   + +  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEIPNINNALLIDVSRDGETESLTLEVALHLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG+ ID ++ +        I  + P   
Sbjct: 64  TDGVQRGAEVRDTGAAISVPVGDATLGRVFNVLGEHIDLEEPIDAAVRRDPIHREAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYYEMKDSGVIAKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D++ DP   +  + LD    L R L+E G YP VDPLAS SR  +      +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDATTNLERKLSEMGIYPAVDPLASTSRALEPTIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + ++ E +DI  I G     +    K V +   I  FL Q+
Sbjct: 362 DVARQVQSTLQKYRELQDIIAILGMDELSEED-KKTVERARRIQFFLSQN 410


>gi|29726142|gb|AAD00597.2| ATP synthase beta subunit [Macleaya cordata]
          Length = 488

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 178/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D             I    P
Sbjct: 69  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGP-XXXXXXXPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|123325701|gb|ABM74475.1| ATP synthase beta subunit [Murraya paniculata]
          Length = 466

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+PID    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPIDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 415


>gi|16943672|emb|CAD10764.1| atp synthase, beta subunit [Amianthium muscitoxicum]
          Length = 498

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  DN+G+ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 50  KGRDNVGRQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|241912827|gb|ACS72092.1| AtpB [Aa paleacea]
          Length = 489

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + ++   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALII--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|13236704|gb|AAK14657.1| ATP synthase beta subunit [Thrinax radiata]
          Length = 498

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLVPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|251799778|ref|YP_003014509.1| ATP synthase F1 subunit beta [Paenibacillus sp. JDR-2]
 gi|247547404|gb|ACT04423.1| ATP synthase F1, beta subunit [Paenibacillus sp. JDR-2]
          Length = 467

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 11/366 (3%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  ++V    +   + +  G      G    I   A   GRV N LG+PID      
Sbjct: 50  AVHLGDNLVRAVAMSTTDGLVRGMEAVDTGAPITIPVGAATLGRVFNVLGEPIDQAGE-A 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             + ++ I  + P         +  +TGI+VID+  P   G +IG+F G+G+GK+  +  
Sbjct: 109 VSETNLPIHRQAPAFDELSTQSEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVTIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +     +  K+ +V    +E P  R+   L
Sbjct: 169 LINNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVLPKTAMVFGQMNEPPGARQRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEYFRDAEGKDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R ++E G +P VDPLA
Sbjct: 289 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKISEMGIFPAVDPLA 346

Query: 356 SVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SRL +      +   +   +  ++ R++E +DI  I G     +      V +   I 
Sbjct: 347 SSSRLLNPEILGEEHYNVAQGVKRILQRYKELQDIIAILGMDELTEED-KLTVSRARRIQ 405

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 406 LFLSQP 411


>gi|224543580|ref|ZP_03684119.1| hypothetical protein CATMIT_02789 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523507|gb|EEF92612.1| hypothetical protein CATMIT_02789 [Catenibacterium mitsuokai DSM
           15897]
          Length = 466

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/363 (30%), Positives = 183/363 (50%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  DIV    +G  + ++ G D V       +       GR+ N LG  IDG D L + +
Sbjct: 50  IGDDIVRCIAMGPTDGLTRGMDAVDTNAPISVPVGNKTLGRMFNVLGHSIDGKDELTE-E 108

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I    P   +++   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  F  
Sbjct: 109 KHMPIHRSAPTFADQRTETEILETGIKVVDLICPFIKGGKIGLFGGAGVGKTVLIQEFIN 168

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +   +     +  K+ +V    +E P  R    L+A+
Sbjct: 169 NIATEHNGLSVFAGVGERSREGNDLYYEMKESGVLDKTTLVFGQMNEPPGSRLRVALSAL 228

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P   GY  ++ +E+ +L ERI 
Sbjct: 229 TMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRVPSQAGYQPTLATEMGQLQERI- 287

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  ++G+IT+V +V V  D+  DP   +  + LD  +VL+RS+A  G YP VDPL S S
Sbjct: 288 -TSTKQGSITSVQAVYVPADDMTDPAPATTFTHLDARVVLDRSIAALGIYPAVDPLNSSS 346

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R  D      +  ++   +T ++ +++E +DI  I G     +      V +   I +FL
Sbjct: 347 RGLDPNVVGKEHYEVAHGVTQMLQKYQELQDIIAILGMDELSEED-KLIVARARRIRNFL 405

Query: 418 KQS 420
            Q 
Sbjct: 406 SQP 408


>gi|119368038|dbj|BAF40532.1| ATP synthase beta subunit [Euonymus hamiltonianus var.
           sieboldianus]
          Length = 477

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     + + +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFSPGKMPNIYNALVVKGRDTSGHTINVICEVQQLLGNNQVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     S+ I    P  
Sbjct: 73  ATDGLMRGMDVIDTGAPLSVPVGVATLGRIFNVLGEPVDNLGPVDTRTTSL-IHKSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|17224735|gb|AAL37089.1| ATP synthase beta subunit [Dioscorea brachybotrya]
          Length = 472

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/417 (26%), Positives = 180/417 (43%), Gaps = 28/417 (6%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGI 77
           +  I  V   V    +   + + +V +G   D  GQ I +  ++        V    +  
Sbjct: 3   VQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIAGQQINVTCEVQQLLGNNRVRAVAMSA 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +
Sbjct: 61  TDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFI 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 120 QLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 179

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 180 GVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 239

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++
Sbjct: 240 RDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKE 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 298 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPG 357

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 IVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|315283679|ref|ZP_07871797.1| ATP synthase F1, beta subunit [Listeria marthii FSL S4-120]
 gi|313612678|gb|EFR86702.1| ATP synthase F1, beta subunit [Listeria marthii FSL S4-120]
          Length = 473

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 176/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            I++  D+V    +   + +  G  V   G    +       GRV N LG  ID D+ L 
Sbjct: 51  AIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNTIDLDEPLP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                 +I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 SDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 171 LIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  L+ R++E +DI  I G     D    ++V +   + 
Sbjct: 349 STSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDELSDED-KQSVSRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|123325657|gb|ABM74453.1| ATP synthase beta subunit [Clymenia polyandra]
          Length = 461

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATEGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|55056904|emb|CAF21953.1| ATP synthase beta subunit [Picea spinulosa]
          Length = 474

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+     +  + + ++ +G+ +   GQ I++  ++        V    
Sbjct: 21  GRIAQIIGPVLDVSFPPGNMPNIYNSLIVKGQGTA--GQEIQVTCEVQQLLGNHKVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 79  MSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDPL S S + 
Sbjct: 316 TKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 434


>gi|7524904|ref|NP_045906.1| ATP synthase CF1 beta subunit [Chlorella vulgaris]
 gi|416678|sp|P32978|ATPB_CHLVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|391651|dbj|BAA01769.1| ATPase F1 beta subunit ['Chlorella' ellipsoidea]
 gi|2224498|dbj|BAA57982.1| ATP synthase CF1 beta chain [Chlorella vulgaris]
          Length = 481

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I+ I      V+  +  +  + + +   GKN          +V ++  D  V    
Sbjct: 9   SSGRITQIIGPVLDVSFPAGKMPNIYNALTVGGKNEAGQEISVTCEVQQLLGDHCVRAVA 68

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G+   +   A   GR+ N LG+P+D    +   D  + I    P
Sbjct: 69  MSATDGLMRGMEVLDSGKPLNVPVGAATLGRIFNVLGEPVDNLGPVNTKDQ-LPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFVDLDTKLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINESNISESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EFFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 306 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTML 365

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPWIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 424


>gi|310778011|ref|YP_003966344.1| ATP synthase F1 subcomplex beta subunit [Ilyobacter polytropus DSM
           2926]
 gi|309747334|gb|ADO81996.1| ATP synthase F1 subcomplex beta subunit [Ilyobacter polytropus DSM
           2926]
          Length = 467

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 188/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCL-GDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEI 81
           G ++ I      V+  S+   +     + +G     + +V + +   +V    +   E +
Sbjct: 5   GILTQIIGPVVDVSFDSELPKIYNSLRIDRGNGEVLIAEVQQHLGNSVVRAICMDGSEGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N LG+PID    + K +    I  + P   ++  
Sbjct: 65  QRGMEVIDTGAPITVPVGKAVLGRILNVLGEPIDQAGEV-KAEEYSSIHREAPAFEDQGT 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 EVEIFETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE R+  ++     +  K+ +V    +E P  R    LT +T+AE F  K   +VLL 
Sbjct: 184 RTREGRDLFDEMTESGVLSKTSLVYGQMNEPPGARLRVALTGLTMAENFRDKEGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R +A  G YP VDPL S S       +  +      
Sbjct: 302 PADDLTDPAPATTFTHLDATTVLSRRIASLGIYPAVDPLDSTSTALQPGITGHEHYTAAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D     AV++   I  F  Q 
Sbjct: 362 EVQSVLQRYKELQDIIAILGMDELSDED-KIAVNRARKIERFFSQP 406


>gi|299537992|ref|ZP_07051278.1| F0F1 ATP synthase subunit beta [Lysinibacillus fusiformis ZC1]
 gi|298726574|gb|EFI67163.1| F0F1 ATP synthase subunit beta [Lysinibacillus fusiformis ZC1]
          Length = 471

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG+ ID  + + 
Sbjct: 49  ALHLGDDSVRTIAMSSTDGLQRGAEVTDLGKAISVPVGEVTLGRVFNVLGEVIDLGEEIP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P   N     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADARRDSIHREAPTFENLSTTVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      +K++ +V    +E P  R    L
Sbjct: 169 LINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQTAMVFGQMNEPPGARMRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 289 RI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR        A+   + + +   I R+ E +DI  I G     D    + V +   I 
Sbjct: 347 STSRALSPEIVGAEHYAIATGVQRTIQRYRELQDIIAILGMDELSDED-KQTVERARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|8452704|emb|CAB90097.2| ATP synthase beta subunit [Nomocharis pardanthina]
          Length = 479

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 10  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVGPQINVTCEVQQLLGNNRVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 70  ATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 129 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 189 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 249 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 307 EGSITSIQAVYVPADDLTDPAPAATFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 366

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 RIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|224830514|gb|ACN66352.1| ATP synthase beta chain [Cissampelos tropaeolifolia]
          Length = 489

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 180/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D LGQ I +  ++        V    +   + 
Sbjct: 21  IGPVLDVVFPPGKMPNIYNALVVKGQ--DTLGQQINVTCEVQQLLGNNRVRAVAMSATDG 78

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 79  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLD 137

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 138 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIXNIAKAHGGVSVFGGVG 197

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 198 ERTREGNDLYMEMKESGVINEHNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 257

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 258 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+  LA +G YP VDPL S S +       
Sbjct: 316 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSXGLAAKGIYPAVDPLDSTSTMLQPRIVG 375

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|218176251|ref|YP_002364508.1| ATP synthase CF1 beta subunit [Festuca arundinacea]
 gi|215882335|gb|ACJ70765.1| ATP synthase CF1 beta subunit [Festuca arundinacea]
          Length = 499

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 170/384 (44%), Gaps = 20/384 (5%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 56  NKQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLG 115

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 116 EPVDNLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 174

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 175 GVGKTVLIMELINNTAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVAL 234

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 235 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKADVLLFIDNIFRFVQAGSEVSALLGRMPS 294

Query: 279 ARGYPTSVFSEL-PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
           A GY  ++ +E+  +L ERI     +KG+IT++ +V V  D+  DP   +  + LD   V
Sbjct: 295 AVGYQPTLSTEMGSKLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTV 352

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G  
Sbjct: 353 LSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLD 412

Query: 397 PGVDLILDKAVHQVPIIYDFLKQS 420
              +      V +   I  FL Q 
Sbjct: 413 ELSEED-RLTVARARKIERFLSQP 435


>gi|154503952|ref|ZP_02041012.1| hypothetical protein RUMGNA_01778 [Ruminococcus gnavus ATCC 29149]
 gi|153795379|gb|EDN77799.1| hypothetical protein RUMGNA_01778 [Ruminococcus gnavus ATCC 29149]
          Length = 464

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 190/407 (46%), Gaps = 15/407 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +  +      + +V   +  + V    +   E +
Sbjct: 4   GRIVQVMGPVVDVVFEDGNLPYIKDALEVENNGKKCIMEVAQHLGNNEVRCLMLAASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ ID  + +   +    I  + P   ++  
Sbjct: 64  HKDMEVTATGAGIKVPVGEKTLGRLFNVLGETIDNGEQIEDAE-KWVIHREPPTFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWSEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ +
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVAN 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 361 KVIAILQKYKELQDIIAILGMEELSDE--DKATVMRARKIQRFLSQP 405


>gi|312285271|gb|ADQ64377.1| ATP synthase beta subunit [Strychnopsis thouarsii]
          Length = 469

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+  D +GQ I +  ++        V    +   + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 62

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 63  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSSIHRSAPAFIQLD 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 122 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 181

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 182 ERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 241

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 242 NEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 299

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 300 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 359

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 412


>gi|241912829|gb|ACS72093.1| AtpB [Aa calceata]
          Length = 489

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|21633281|gb|AAM52115.1| ATP synthase beta subunit [Stictocardia tiliifolia]
          Length = 490

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V        +       GR+ N LG+P+D    +   + +  I    P  + 
Sbjct: 81  DGLMRGMEVIDMRAPISVPVGGSTLGRIFNVLGQPVDNLGPVD-TNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|7706848|emb|CAB90075.1| ATP synthase beta subunit [Amaranthus hypochondriacus]
          Length = 456

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG+P+D
Sbjct: 36  NVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVD 95

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 96  NLGPVDTSTTS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 154

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 155 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQ 214

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 215 MNEPPGARMRVGXTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 274

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 275 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 332

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 333 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 392

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 393 D-RLTVARARKIERFLSQP 410


>gi|237832039|ref|XP_002365317.1| ATP synthase beta chain, putative [Toxoplasma gondii ME49]
 gi|78057343|gb|ABB17195.1| mitochondrial F1-ATP synthase beta subunit precursor [Toxoplasma
           gondii]
 gi|211962981|gb|EEA98176.1| ATP synthase beta chain, putative [Toxoplasma gondii ME49]
 gi|221486827|gb|EEE25073.1| ATP synthase beta chain, putative [Toxoplasma gondii GT1]
 gi|221506525|gb|EEE32142.1| ATP synthase beta chain, putative [Toxoplasma gondii VEG]
          Length = 560

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 187/419 (44%), Gaps = 26/419 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    Q   + + +  QG  +  + +V   +  + V    +   E + 
Sbjct: 82  GRITQVIGAVVDVHFDEQLPPILNSLEVQGHTNRLVLEVAQHLGENTVRTIAMDATEGLV 141

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   ++       GR++N +G+P+D    +     +  I    P   ++   
Sbjct: 142 RGQKVVDTGAPIQVPVGVETLGRIMNVIGEPVDECGPV-PAKKTYSIHRAAPLFADQSTE 200

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
               +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 201 PGLLQTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVANKHGGFSVFAGVGER 260

Query: 199 GREVREFIEDYLGDNL---------------KKSVVVVATSDESPILRKMAPLTAVTIAE 243
            RE  +   + +   +                K+ +V    +E P  R    LTA+++AE
Sbjct: 261 TREGNDLYHEMMTTGVIKRKKLEDGKFDFTGSKAALVYGQMNEPPGARARVALTALSVAE 320

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++L +L ERI  +  
Sbjct: 321 YFRDEQGQDVLLFIDNIYRFTQAGSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTT 378

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA- 361
           +KG+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+  
Sbjct: 379 KKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLA 438

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +    +      +   L+  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 439 PEIVGQEHYDTARATQKLLQDYKSLQDIIAILGMDELSEED-KLVVSRARKIQRFLSQP 496


>gi|324512115|gb|ADY45028.1| ATP synthase subunit beta [Ascaris suum]
          Length = 549

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/411 (25%), Positives = 184/411 (44%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGEEIS 82
           G I ++      V        + + +   G+    + +V +   D +V    +   E + 
Sbjct: 82  GKIVAVIGAVVDVQFDENLPPILNALEVTGRKPRLILEVAQHLGDSVVRTIAMDGTEGLV 141

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G+ V   G    I       GR++N +G+PID    +     +  I ++ P  ++    
Sbjct: 142 RGNEVVDTGNPIMIPVGPETLGRIMNVIGEPIDERGPIPAKHFA-PIHAEAPAFVDMSVE 200

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 201 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 260

Query: 199 GREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +            K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 261 TREGNDLYHEMIEGGVIDLKGNNSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQ 320

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 321 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSV 378

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            ++ V  D+  DP   +  + LD   VL+R +AE   YP VDPL S SR+ D        
Sbjct: 379 QAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNIVGQKH 438

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 439 YDIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 488


>gi|300174065|ref|YP_003773231.1| ATP synthase F1 subunit beta [Leuconostoc gasicomitatum LMG 18811]
 gi|299888444|emb|CBL92412.1| ATP synthase F1, beta subunit [Leuconostoc gasicomitatum LMG 18811]
          Length = 466

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 14/392 (3%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           + +G+      +V + +   IV    +   + +  G  V   G    +       GRV N
Sbjct: 33  IDKGEGQTLTVEVSLALGNGIVRTIAMDSTDGLQRGMSVTDTGDAITVPVGEATLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+P+D +  +        I    P         +  +TGI+VID+  P   G +IG+F
Sbjct: 93  VLGEPVDNNGDISAETPRHSIHRDAPKYDELANSTEILETGIKVIDLLAPYVRGGKIGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK-SVVVVAT 223
            G+G+GK+ L+     +       IS+   VGER RE  +   +     + K + +V   
Sbjct: 153 GGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAESGVLKQTAMVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AE F      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTMAENFRDDEGKDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D      +  ++ + +   + R+ E +DI  I G     D 
Sbjct: 331 TQQGIYPAVDPLASTSSALDPQIVGQEHYEIATEVQRTLQRYRELQDIISILGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                V++   I  FL Q     S  + F  I
Sbjct: 391 E-KTTVNRARRIQFFLSQP---FSVAETFTGI 418


>gi|255954579|ref|XP_002568042.1| Pc21g10070 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589753|emb|CAP95904.1| Pc21g10070 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 518

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 181/438 (41%), Gaps = 21/438 (4%)

Query: 14  DYSKNLVVQGGYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVY 71
            ++ +     G +  +      V  +                     L     +  ++V 
Sbjct: 38  RFASSDATLTGKVHQVIGAVVDVKFSGEKLPAIYNAITTTNNGQKLVLEVAQHLGENVVR 97

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   E +S G      G    I       GR+IN  G PID    +     +  I +
Sbjct: 98  TIAMDGTEGLSRGVAAEDTGAPITIPVGPSTLGRIINVTGDPIDERGPIKATKFA-PIHA 156

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  +++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +      
Sbjct: 157 EPPAFVDQSTSAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHG 216

Query: 191 ---IISLVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTI 241
              +   VGER RE  +   +         +   K  +V    +E P  R    LT +TI
Sbjct: 217 GYSVFCGVGERTREGNDLYHEMQETGVIQLEGDSKVALVFGQMNEPPGARARVALTGLTI 276

Query: 242 AEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +
Sbjct: 277 AEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGVMQERI--T 334

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+
Sbjct: 335 TTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRM 394

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +     S +  ++  ++  +DI  I G     +      V +   +  FL Q
Sbjct: 395 LDPRIIGEEHYATASRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQ 453

Query: 420 SPSDLSSEDVFQEITKKL 437
                +   VF  I   L
Sbjct: 454 P---FAVAQVFTGIEGTL 468


>gi|150187187|emb|CAK30190.1| ATP synthase alpha subunit [Streptococcus lutetiensis]
 gi|150187194|emb|CAK30192.1| ATP synthase alpha subunit [Streptococcus pasteurianus]
 gi|150187206|emb|CAK30195.1| ATP synthase alpha subunit [Streptococcus macedonicus]
 gi|150187234|emb|CAK30202.1| ATP synthase alpha subunit [Streptococcus gallolyticus subsp.
           gallolyticus]
 gi|150187238|emb|CAK30203.1| ATP synthase alpha subunit [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|150187306|emb|CAK30223.1| ATP synthase alpha subunit [Streptococcus lutetiensis]
 gi|154424877|emb|CAL18541.1| ATP synthase alpha subunit [Streptococcus gallolyticus]
 gi|154424879|emb|CAL18542.1| ATP synthase alpha subunit [Streptococcus gallolyticus]
 gi|154424881|emb|CAL18543.1| ATP synthase alpha subunit [Streptococcus gallolyticus]
 gi|154424887|emb|CAL18546.1| ATP synthase alpha subunit [Streptococcus pasteurianus]
 gi|154424889|emb|CAL18547.1| ATP synthase alpha subunit [Streptococcus pasteurianus]
 gi|154424937|emb|CAL18571.1| ATP synthase alpha subunit [Streptococcus gallolyticus subsp.
           gallolyticus]
 gi|154424939|emb|CAL18572.1| ATP synthase alpha subunit [Streptococcus gallolyticus subsp.
           gallolyticus]
          Length = 367

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 154/367 (41%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AFGMAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   + K   +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDI-KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|112791356|gb|ABI21948.1| ATP synthase beta subunit [Rahnella aquatilis]
          Length = 421

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +   S  + +V + +   +V    +G  + +  G  V +      +       GR++
Sbjct: 5   LEVENGTSKLVLEVQQQLGGGVVRCIAMGTSDGLRRGLKVNNLEHPIEVPVGKATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG+PID    +G+ +    I    P        ++  +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGEPIDMKGEIGEEE-RRAIHRAAPSYEELANSQELLETGIKVMDLMCPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|11034789|gb|AAG27083.1| ATP synthase beta subunit [Dioscorea bulbifera]
          Length = 487

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 46  GQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLG 105

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 106 EPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 164

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 165 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIAESKVAL 224

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 225 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 284

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 285 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 342

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +     R++E +DI  I G   
Sbjct: 343 SRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDE 402

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 403 LSEED-RLTVARARKIERFLSQP 424


>gi|241912906|gb|ACS72131.1| AtpB [Sarcoglottis grandiflora]
          Length = 489

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|158338428|ref|YP_001519605.1| F0F1 ATP synthase subunit beta [Acaryochloris marina MBIC11017]
 gi|158308669|gb|ABW30286.1| ATP synthase F1, beta subunit [Acaryochloris marina MBIC11017]
          Length = 484

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 116/419 (27%), Positives = 191/419 (45%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPV 75
            GYIS I      V   S  +  + + +  +GKN+         +V ++  D  V    +
Sbjct: 9   TGYISQIIGPVLDVEFPSGKLPKIYNALKAKGKNAAGDDVSVTCEVQQLLGDNQVRAVSM 68

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V   G    I       GR+ N LG+P+D    +G  D +  I    P 
Sbjct: 69  SSTDGLVRGMEVEDTGAPISIPVGKATLGRIFNVLGEPVDNQGDVG-TDETFPIHRPAPK 127

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
             + +     F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +   +   +S+
Sbjct: 128 LTDLETKPSVFETGIKVIDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATNHGGVSV 187

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   + +             K  +     +E P  R    L+A+T+AE
Sbjct: 188 FGGVGERTREGNDLYNEMMESGVINKDNLNDSKIALCYGQMNEPPGARMRVGLSALTMAE 247

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  
Sbjct: 248 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TST 305

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +  
Sbjct: 306 TEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSASTMLQ 365

Query: 363 KAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +D   +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 PGIVSDEHYETARAVQSTLQRYKELQDIIAILGLDELSEDD-RLVVARARKIERFLSQP 423


>gi|161723286|ref|NP_757448.2| F0F1 ATP synthase subunit beta [Mycoplasma penetrans HF-2]
          Length = 489

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 120/412 (29%), Positives = 195/412 (47%), Gaps = 14/412 (3%)

Query: 19  LVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIV-YICPV 75
           L    G I  I      V    +Q   + D +  +  N+  L  +V  +  D V     +
Sbjct: 6   LKSDKGIIYQIFGPVVDVKFARNQMPNINDCLEVKLPNNKKLVLEVALLEGDDVARCISM 65

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G  E +  G  V +          +   GR+ N +G+PID      K + S  I  K P 
Sbjct: 66  GSTEGLYRGLEVINTKNPIMAPVGSAVLGRMFNVVGEPIDNKPMPEKVEYS-PIHKKPPS 124

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
              +    + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         I
Sbjct: 125 FDEQSTKTEIFETGIKVIDLLVPYVKGGKIGLFGGAGVGKTVLVQELIHNIATGHGGLSI 184

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKG 249
            + VGER RE  +   +   G  + ++ +V    +E P  R    LTA+T+AE+F  +  
Sbjct: 185 FAGVGERTREGNDLYHEMIDGGVINQTALVFGQMNEPPGARMRVALTALTMAEHFRENNK 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF+ +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+
Sbjct: 245 QDVLLFIDNIFRFSQAGSEVSALLGRIPSAVGYQPTLAFEMGQLQERI--TSTKSGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R +A  G YP ++PL S SR+ D +    +
Sbjct: 303 VQAVYVPADDLTDPAPSTTFAHLDAKTVLDRKIASLGIYPAINPLESSSRMLDPSIVGIE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             K+  S+  ++ +FEE +DI  I G     +      V +   I +FL Q 
Sbjct: 363 HYKVARSVQTILQKFEELQDIIAILGIDELSEED-KLTVSRARKIRNFLSQP 413


>gi|17232531|ref|NP_489079.1| F0F1 ATP synthase subunit beta [Nostoc sp. PCC 7120]
 gi|20141199|sp|P06540|ATPB_ANASP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|17134177|dbj|BAB76738.1| ATP synthase beta subunit [Nostoc sp. PCC 7120]
          Length = 482

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V   +  +  + + +  +G N    GQ + + +++        +    
Sbjct: 11  GYITQIIGPVVDVKFPNGKLPQIYNALTIKGTNEA--GQQLNLTVEVQQLLGDNQIRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +   + ++ I    P
Sbjct: 69  MSSTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +         
Sbjct: 128 KLTELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 188 VFAGVGERTREGNDLYNEMIESGVINNENLNESKIALVYGQMNEPPGARMRVGLSGLTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S + 
Sbjct: 306 TTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTML 365

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 DE      ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 QPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGLDELSEED-RLIVARARKVERFLSQP 424


>gi|332880276|ref|ZP_08447954.1| ATP synthase F1, alpha subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681721|gb|EGJ54640.1| ATP synthase F1, alpha subunit [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 528

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/429 (22%), Positives = 164/429 (38%), Gaps = 36/429 (8%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G +  ++     +  L  +    + +  +      +G V+ +  D V    +G    I
Sbjct: 29  EVGAVLQVSDGVARIYGL-LHAEANELLEFENG---VMGVVMNLEEDNVGAVLLGATGLI 84

Query: 82  SLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G +V   GR   I  S    GRVI+ LG P+DG  ++G     M +  K P  + RQ 
Sbjct: 85  KEGMIVKRTGRIASIRVSENMLGRVIDPLGVPLDGRGTVGGELFEMPLERKAPGVIYRQP 144

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD-------CFDKVIIS 193
           V +  +TGI+ ID   P+  GQR  +      GK+ +      +             I  
Sbjct: 145 VSEPLQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAIDTIINQRSAYEAGKPVYCIYV 204

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
            +G++G  V   +           +VVV AT+ +   L+  AP     I EYF   G + 
Sbjct: 205 AIGQKGSTVANIVNTLREKGAMDYTVVVAATAADPAALQYFAPFAGAAIGEYFRDTGRHA 264

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE----------- 301
           L++ D +++ A + RE++           YP  +F    RLLER                
Sbjct: 265 LVVFDDLSKQAVAYREVSLILRRPSGREAYPGDIFYLHSRLLERAAKIINQQEVAEQMND 324

Query: 302 ---------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
                    K  G++TA+  +     + +  I  +V SI DG I L   L  +G  P ++
Sbjct: 325 LPESLKGKVKCGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNQGFRPAIN 384

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
              SVSR+   A     KK+  +L     ++ E         +   +D +    + +   
Sbjct: 385 VGISVSRVGGSAQIKSMKKVAGTLKIDQAQYRELE---AFSKFSSDMDSVTVMTIDRGRK 441

Query: 413 IYDFLKQSP 421
               L Q  
Sbjct: 442 NNQLLIQPQ 450


>gi|123325633|gb|ABM74441.1| ATP synthase beta subunit [Citrus macroptera]
          Length = 466

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATEGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|186886221|gb|ACC93513.1| ATPase F1 alpha subunit [Luzula nivea]
          Length = 352

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 88/348 (25%), Positives = 150/348 (43%), Gaps = 15/348 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  +    +   I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 3   GIALNPENENARIGAFGSDTAIKEGDLVKRTGSIVDVPAGRALLGRVVDALGVPIDGKGA 62

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177
           LG  +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 63  LGDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 121

Query: 178 ---------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227
                    ++   + +     +   +G++   V + ++     N    SV+V AT+ + 
Sbjct: 122 IDTILNQKEMNSKGKENETLYCVYVAIGQKRSTVAQLVQILSEANALDYSVLVAATASDP 181

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF
Sbjct: 182 APLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVF 241

Query: 288 SELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
               RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L   
Sbjct: 242 YLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYR 301

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G  P ++   SVSR+   A     K++  SL   + ++ E       G
Sbjct: 302 GIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQYREVAAFAQFG 349


>gi|184154917|ref|YP_001843257.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum IFO 3956]
 gi|227514481|ref|ZP_03944530.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum ATCC 14931]
 gi|260663296|ref|ZP_05864187.1| ATP synthase F1, beta subunit [Lactobacillus fermentum 28-3-CHN]
 gi|183226261|dbj|BAG26777.1| F1F0-ATPase beta subunit [Lactobacillus fermentum IFO 3956]
 gi|227087167|gb|EEI22479.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum ATCC 14931]
 gi|260552148|gb|EEX25200.1| ATP synthase F1, beta subunit [Lactobacillus fermentum 28-3-CHN]
          Length = 473

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + +  G  V +      +       GRV N LG+P+D     G
Sbjct: 47  ALELGDGVVRTIAMDGTDGLKRGMAVENTDASISVPVGDDTLGRVFNVLGEPVDNGPEFG 106

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                M I    P   +     +  +TGI+VID+  P   G +IG+F G+G+GK+ L+  
Sbjct: 107 PDAQRMPIHRDAPKYEDLSNTTEVLETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQE 166

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
              +       IS+   VGER RE  +   +     + +K+ +V    +E P  R    L
Sbjct: 167 LIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKTAMVYGQMNEPPGARMRVAL 226

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 227 TGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQE 286

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 287 RI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLA 344

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S  L  +    +  ++ + + H++ R+ E +DI  I G     D      V +   I 
Sbjct: 345 STSTALTPEVVGQEHYEVATGVQHVLQRYRELQDIISILGMDELSDEE-KTIVARARRIQ 403

Query: 415 DFLKQS 420
           +FL QS
Sbjct: 404 NFLSQS 409


>gi|167768302|ref|ZP_02440355.1| hypothetical protein CLOSS21_02858 [Clostridium sp. SS2/1]
 gi|317497767|ref|ZP_07956080.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709826|gb|EDS20405.1| hypothetical protein CLOSS21_02858 [Clostridium sp. SS2/1]
 gi|291560278|emb|CBL39078.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing
           bacterium SSC/2]
 gi|316894956|gb|EFV17125.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 462

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 200/422 (47%), Gaps = 16/422 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLG-DFVVHQGKNSDNLGQVIRINLD-IVYICPVGIG 78
           ++ G I  I      V   ++ + L  D +    K  + + +V +   +  V    +   
Sbjct: 1   MEKGKIVQILGPVIDVEFETEQLPLIHDALTVVNKGKEVVMEVEQHMGNRTVRCILLAAS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G   ++       GR+ N LG+ ID  + + + +    I  + P   +
Sbjct: 61  EGLHKGMEVTATGGPIKVPVGKQTLGRMFNVLGEAIDKGEPV-ESEEKWAIHREPPKFED 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +  V + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   
Sbjct: 120 QSPVVEMFETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +      +K + +V    +E P  R     T +T+AEYF  +   NV
Sbjct: 180 VGERSREGNDLWNEMTESGVIKNTALVFGQMNEPPGSRMRVAQTGLTMAEYFRDQEKQNV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 240 LLFIDNIFRYVQAGSEVSALLGRMPSAVGYQPTLANEVGALQERI--TSTKNGSITSVQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+R+++E+G YP VDPL S SR+ +      +  +
Sbjct: 298 VYVPADDLTDPAPATTFAHLDATTVLSRAISEQGIYPAVDPLESSSRILEPDIVGEEHYE 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +   + R++E +DI  I G    +D      V++   I  FL Q     +  + F 
Sbjct: 358 VARRVEEALQRYKELQDIIAILGMEE-LDEEDKITVYRARKIQKFLSQP---FNVAETFT 413

Query: 432 EI 433
            I
Sbjct: 414 GI 415


>gi|29726152|gb|AAD00602.2| ATP synthase beta subunit [Dendromecon rigidum]
          Length = 480

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S       P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVXXXTXS-PXHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLXDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|157285225|gb|ABV31352.1| ATPase [Vibrio rumoiensis]
          Length = 428

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 175/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G    +  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---LYALALNLERDSVGAVVMGPYANLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   L    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGQPIDGKG-LIDAKLTSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     ++              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEDYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K ++    + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDAATKKQLNHGQKVTELMKQKQ--YAPFSVFDQAL 410


>gi|52082899|gb|AAU26029.1| ATPase beta subunit [Peperomia sp. MAJ-2004]
          Length = 479

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 27/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ + K  D + Q I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALIVKVKGQDTVDQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYIEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSSML 357

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEKHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|160914778|ref|ZP_02076992.1| hypothetical protein EUBDOL_00785 [Eubacterium dolichum DSM 3991]
 gi|158433318|gb|EDP11607.1| hypothetical protein EUBDOL_00785 [Eubacterium dolichum DSM 3991]
          Length = 466

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 18/409 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVGIG 78
           G I  +      +T    +   L   +    K+ D+L  V+ ++     D V    +G  
Sbjct: 6   GKIVQVIGPVVDITFEDGELPALLTAIEIPLKDQDSL--VVEVSQHTGDDRVRCIAMGST 63

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N LG+ IDG   +      + I    P    
Sbjct: 64  DGLVRGMEAIDTGAPISVPVGKEVLGRMFNVLGREIDGLGKVEAA-TKLPIHRAAPTFDE 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +Q   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     +++ 
Sbjct: 123 QQTSAEMLETGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVVTG 182

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNV 252
           VGER RE  +   +     +  K+V+V    +ESP  R    LT +T+AE+F      +V
Sbjct: 183 VGERTREGNDMYHEMKDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEHFRDHDHQDV 242

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  + G+IT+V +
Sbjct: 243 LLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKNGSITSVQA 300

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ D      +  +
Sbjct: 301 IYVPADDLTDPAPATAFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYE 360

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ R++E +DI  I G     +      V++   + +FL Q 
Sbjct: 361 VARGVQEILQRYKELQDIIAILGMDELSEED-KIIVNRARRVRNFLSQP 408


>gi|20467395|gb|AAL27828.1| ATPase beta subunit [Pinus mugo]
          Length = 432

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 16  GEEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 75

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 76  EPVDNLGPVDAC-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 134

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 135 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQKISESKVAL 194

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 195 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 254

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 255 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 312

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 313 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 372

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 373 LSEED-RLIVARARKIERFLSQP 394


>gi|308184872|ref|YP_003929005.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SJM180]
 gi|308060792|gb|ADO02688.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SJM180]
          Length = 469

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 6   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 65

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  +SL    L+  I  K P    
Sbjct: 66  EGLVRNQVVKARGKMIEVPVGEEVLGRIFNVVGESIDNLESLKPS-LTWPIHRKAPSFEQ 124

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 125 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 184

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 185 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 244

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 245 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 302

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 303 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 362

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 363 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 410


>gi|241912862|gb|ACS72109.1| AtpB [Goodyera repens]
          Length = 489

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V Q  + D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIQ--SRDTVGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+G++ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|163738066|ref|ZP_02145482.1| ATP synthase FliI/YscN [Phaeobacter gallaeciensis BS107]
 gi|163742538|ref|ZP_02149924.1| H+-transporting two-sector ATPase, flagellum-specific [Phaeobacter
           gallaeciensis 2.10]
 gi|161384123|gb|EDQ08506.1| H+-transporting two-sector ATPase, flagellum-specific [Phaeobacter
           gallaeciensis 2.10]
 gi|161388682|gb|EDQ13035.1| ATP synthase FliI/YscN [Phaeobacter gallaeciensis BS107]
          Length = 442

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 168/438 (38%), Positives = 260/438 (59%), Gaps = 5/438 (1%)

Query: 4   NLETLAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQ 61
            +  +  L +D  +K L    G +S I+    TV+ L+    +GD ++ +   SD L G+
Sbjct: 1   MISAINALTQDLANKKLSSAVGRVSEISGGAITVSGLNGQARIGDRLILRRAGSDPLEGE 60

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121
           V+RI+   V + P    + +++GD V        +P+  W GRVI+  G P+DG   + +
Sbjct: 61  VMRISGSEVSMLPDTAPDRVAVGDAVLLHPTPDFAPADSWIGRVIDPFGAPLDGR-PMMR 119

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
           G+ + ++M+  P A +R+ + +   TG+ V +   P+  GQR+G+FAGSG+GKSTLL+  
Sbjct: 120 GEATRDLMAAPPKAASRRPMGERLATGLAVFNTILPIVKGQRVGLFAGSGVGKSTLLATL 179

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           A++   D V+I+L+GERGREV  F++D LGD    ++VVV ATSD+S ++R+    +A+ 
Sbjct: 180 AQNMEADVVVIALIGERGREVNHFVKDVLGDEGMQRAVVVAATSDQSALVRRRCAWSAMA 239

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +G NVL + DS+TRFA + REIA +SGE P  RGYP SV   +  L ER GP 
Sbjct: 240 VAEHFRDQGKNVLFLADSVTRFAEAHREIAVSSGEAPALRGYPPSVTPLITGLCERAGPG 299

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+ITA+ SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD   SVSR 
Sbjct: 300 SGDQGDITAIFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRS 359

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A +ADE   +  +   +  +E++  +   G Y  G D+ LD+AV   P +  F  +S
Sbjct: 360 LPAAATADENSAILDVRKYLGAYEQSEVMIRAGLYSEGNDVTLDQAVKLWPELDSFFGRS 419

Query: 421 PSDLSSEDVFQEITKKLQ 438
                 +  F  +   ++
Sbjct: 420 -DPEGVQSSFNRLMLMMR 436


>gi|4995055|emb|CAB43987.1| H(+)-transporting ATP synthase [Bombax ceiba]
          Length = 469

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 25  KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVDNLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNXQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTXEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +       +E  +    +     R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLXSTSTMLQPRIVGEEHXETAQRVKQTXXRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|52082870|gb|AAU26016.1| ATPase beta subunit [Zippelia begoniifolia]
          Length = 475

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPKIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 59  MSATDGLMRGMEVIDTRASLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF    ++ +L  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEHDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +     +V +   +  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLSVARARKMERFLSQP 414


>gi|28188339|gb|AAL92549.1| ATP synthase beta subunit [Coleochaete divergens]
          Length = 401

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDST- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +++ I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  ITLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|189314211|gb|ACD89005.1| ATP synthase beta subunit [Dioscoreophyllum cumminsii]
          Length = 468

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 24/412 (5%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVGIGEEIS 82
           I  V   V    +   + + +V +G+++     +   +V ++  +  V    +   + + 
Sbjct: 5   IGPVLDVVFPPGKMPNIYNALVVKGQDTVGHQINVTCEVQQLLGNNRVRAVAMSATDGLM 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +     +  I    P  +     
Sbjct: 65  RGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAPAFIQLDTK 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   ER
Sbjct: 124 LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGER 183

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 184 TREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNE 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 244 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITS 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        +
Sbjct: 302 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKE 361

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 HYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|246880751|gb|ACS95063.1| ATP synthase CF1 beta subunit [Dunaliella salina]
          Length = 480

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 113/425 (26%), Positives = 186/425 (43%), Gaps = 25/425 (5%)

Query: 17  KNLVVQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-----GQVIRINLDI- 69
            N     G +  +   V   V    Q   + + +  + KN+  L      +V ++  D  
Sbjct: 2   TNETANIGRVVQVIGPVLDIVFAKGQVPNIYNALTIKSKNAAGLEVAVTVEVQQLLGDNA 61

Query: 70  VYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V        +       GR+ N LG+P+D    +  G  S  I
Sbjct: 62  VRAVSMLPTEGLMRGMEVLDTQKPLTVPVGPDTLGRIFNVLGEPVDNLGPVNAG-QSNPI 120

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 121 HRQAPTFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 180

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 181 HGGVSVFAGVGERTREGNDLYGEMKESGVIQENNLPESKVALVYGQMNEPPGARMRVGLT 240

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 241 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 300

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP + +  + LD   VL+R LA +G YP VDPL S
Sbjct: 301 I--TSTKDGSITSIQAVYVPADDLTDPASATTFTHLDACTVLSRGLASKGIYPAVDPLDS 358

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +      S++   + R++E +DI  I G     +    + V +   I  
Sbjct: 359 TSTMLQPWIIGEKHYSAASNVKETLQRYKELQDIIAILGLDELSEED-RQTVARARRIER 417

Query: 416 FLKQS 420
           FL Q 
Sbjct: 418 FLSQP 422


>gi|2605826|gb|AAC38056.1| ATP synthase alpha subunit [Methanosarcina barkeri]
          Length = 588

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/427 (25%), Positives = 178/427 (41%), Gaps = 15/427 (3%)

Query: 3   KNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61
           K    + Q+ E  +  L   + G I ++++    V+ L   V   + +   G   D  G 
Sbjct: 27  KVFTEIHQVRESVTPTLTPKEVGRILTVSTGIANVSGL-PTVGFDELIKFPG---DLFGI 82

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLG 120
              ++   +    +G    +  GD V    R           GRVI+ LG+P+D    + 
Sbjct: 83  AFNVDEKEIGTVLLGEYSHLHAGDQVERTRRVMDVAVGEELLGRVIDPLGRPLDNKGPIV 142

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-- 178
                + I    P  M+R  V    +TG++VID   P+  GQR  +      GK+ +   
Sbjct: 143 SSK-RLPIERPSPAIMDRAPVTVPLQTGVKVIDALIPIGRGQRELILGDRQTGKTAIAID 201

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237
           ++  + +     +   +G+R   V   + +         ++VVV   ++   L  + P  
Sbjct: 202 TILNQRNFNVLCVYCAIGQRASAVARAVANLRERGAMDYTIVVVTEGNDPSGLIYITPYA 261

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A +IAEYF   G +VL++ D +T  A + RE++      P    YP  +F    RLLER 
Sbjct: 262 ATSIAEYFMESGRDVLIVYDDLTNHARAYRELSLLLRRPPGREAYPGDIFYIHSRLLERS 321

Query: 298 GPS--EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                E   G++TA+  +  +  N +  I  ++ SI DG I L+ SL E G  P VD   
Sbjct: 322 THLLKEFGGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGK 381

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           SVSR+  KA  A  +++   L     +FEE         +   +D    + +     I  
Sbjct: 382 SVSRVGGKAQLAAYREVAGDLKLAYSQFEELE---TFTRFGAKLDENTRRLIEHGRRIRA 438

Query: 416 FLKQSPS 422
            LKQ  +
Sbjct: 439 LLKQPHN 445


>gi|289498337|gb|ADC99207.1| ATP synthase F1 alpha subunit [Vibrio sp. SPR145]
          Length = 415

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 170/409 (41%), Gaps = 26/409 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACW 101
           V  G+ +   G         + +  D V    +G    +  G  V   GR   +      
Sbjct: 5   VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYANLQEGMKVTGTGRILEVPVGPEM 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + +D   P+  G
Sbjct: 62  LGRVVNTLGEPIDGKGPIN-AQLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+ +      +  D     I   +G++   +   +           ++
Sbjct: 121 QRELIIGDRQTGKTAMAIDAIINQRDSGIYSIYVAIGQKASTIANVVRKLEEHGALANTI 180

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      P 
Sbjct: 181 VVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPG 240

Query: 279 ARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER     +             + G++TA+  +     + +  + 
Sbjct: 241 REAFPGDVFYLHSRLLERASRVSEAYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E
Sbjct: 301 TNVISITDGQIFLQTELFNAGIRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE 360

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
              +     +   +D    + ++    + + +KQ     +   VF +  
Sbjct: 361 ---LAAFAQFSSDLDATTKRQLNHGQKVTELMKQKQ--YAPFSVFDQAL 404


>gi|237688512|ref|YP_002905130.1| ATP synthase CF1 alpha subunit [Pinus contorta]
 gi|226875341|gb|ACO89079.1| ATP synthase CF1 alpha subunit [Pinus contorta]
          Length = 507

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 97/424 (22%), Positives = 169/424 (39%), Gaps = 15/424 (3%)

Query: 6   ETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  E Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIEQYNNEVRVGNLGTVLQVGDGIARIHGLDE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +G G  I  G  V   G+      S  + GRV+NAL             +
Sbjct: 67  LGSDNVGAVLMGDGLMIQEGSSVRATGKIXXXXVSDAYLGRVVNALXXXXXXXXXXXXXE 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I       ++R+ V +  +TG+  ID   P+  GQR  +      GK+ + +    
Sbjct: 127 FRL-IXXXXXXXISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTIL 185

Query: 184 SD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G+R   V + +  +        ++VV  T+D    L+ +AP T  T
Sbjct: 186 NQKSQNVICVYVAIGQRASSVAQVVNTFRERGAMAYTIVVAETADSPATLQYLAPYTGAT 245

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AEYF  K  +  +I D +++ A + R+++      P    YP  VF    RLLER    
Sbjct: 246 LAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL 305

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +  +G++TA+  V     + +  I  +  SI DG I  +  L   G  P ++   SVS
Sbjct: 306 SSQLGEGSVTALPIVETQAGDVSAYIPTNAISITDGQIFSSSDLFNAGIRPAINVGISVS 365

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A     KK+   L   + +F E         +   +D      + +   + + LK
Sbjct: 366 RVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQLARGQRLRELLK 422

Query: 419 QSPS 422
           QS S
Sbjct: 423 QSQS 426


>gi|123325627|gb|ABM74438.1| ATP synthase beta subunit [Citrus latipes]
          Length = 457

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|163737805|ref|ZP_02145222.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis BS107]
 gi|163742889|ref|ZP_02150273.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis 2.10]
 gi|161383853|gb|EDQ08238.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis 2.10]
 gi|161389331|gb|EDQ13683.1| ATP synthase subunit beta [Phaeobacter gallaeciensis BS107]
          Length = 474

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 185/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V        + + +         + +V   +  + V    +   E + 
Sbjct: 6   GKVTQIIGAVVDVQFDGHLPAILNALTTDNNGKTLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V        I       GR++N +G+P+D    +   + +  I    P   ++   
Sbjct: 66  RGQAVADTDAPISIPVGNATLGRILNVVGEPVDEQGPVVAAE-TRAIHQPAPEFSDQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNRS++E G YP VDPL S SRL D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRSISELGIYPAVDPLDSTSRLMDPSIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              + S +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYAVASDVQQILQRYKSLQDIIAILGMDELSEED-KLTVTRARKIQRFLSQ-PFDVA 417


>gi|37720939|gb|AAN32472.1| ATP synthase beta subunit [Butomus umbellatus]
          Length = 483

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V + G    +       GR+ N LG+P+D    +   D +  I    P
Sbjct: 71  MSATDGLTRGMEVINTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TDTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +          R++  +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRXKQTSQRYKXLQDIIAILGLDELSEED-RLIVARARKIERFLSQP 426


>gi|55056912|emb|CAF21957.1| ATP synthase beta subunit [Torreya californica]
          Length = 441

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 104/370 (28%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +G   
Sbjct: 36  LGNNKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGETTLGRIFNVLGEPVDDLGPVGALT 95

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 96  TS-PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 154

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +  ++               K  +V    +E P  R 
Sbjct: 155 NIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARM 214

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 215 RVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 274

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 275 SLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 332

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 333 DPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 391

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 392 RKIERFLSQP 401


>gi|189095386|ref|YP_001936399.1| ATP synthase CF1 beta subunit [Heterosigma akashiwo]
 gi|157694729|gb|ABV66005.1| ATP synthase CF1 beta chain [Heterosigma akashiwo]
 gi|157777960|gb|ABV70146.1| ATP synthase CF1 beta chain [Heterosigma akashiwo]
          Length = 474

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 180/413 (43%), Gaps = 19/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           GY   I      +   S  +  + + +  +  +   + +V ++  D  V    +   + +
Sbjct: 9   GYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGL 68

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG P+D    +     ++ I    P     + 
Sbjct: 69  KRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELET 128

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGE 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +   VGE
Sbjct: 129 KPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 188

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +  E+               K  +V    +E P  R    LTA+T+AE+F    
Sbjct: 189 RTREGNDLYEEMKESGVINKQNLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVN 248

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+IT
Sbjct: 249 KQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSIT 306

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  K+   +
Sbjct: 307 SIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGE 366

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 367 LHYATAQAVQKTLQRYKELQDIIAILGIDELSEED-RLLVARARKVERFLSQP 418


>gi|63253287|dbj|BAD98439.1| beta subunit of ATP synthesis [Scyphularia triphylla]
          Length = 464

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+NS     D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNSAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +    + V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RQTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|17224717|gb|AAL37080.1| ATP synthase beta subunit [Dioscorea mcvaughii]
          Length = 482

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPGIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|326387009|ref|ZP_08208619.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208190|gb|EGD58997.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 481

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/424 (25%), Positives = 188/424 (44%), Gaps = 24/424 (5%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPV 75
             ++   G IS +      V    +   +   +      +  + +V   +  + V    +
Sbjct: 2   ATVLTSTGKISQVIGAVVDVQFDGELPAILTALETDNNGNRLVLEVAQHLGENTVRTIAM 61

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + ++ G  V + G +  +       GR++N +G PID +  +G  D+   I +K P 
Sbjct: 62  DSTDGLTRGQPVSNTGAQISVPVGPKTLGRILNVVGDPIDDNGPVG-ADMFAPIHAKAPE 120

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
            + +        TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 121 FIEQSTEAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSV 180

Query: 192 ISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTA 238
            + VGER RE  +   ++L   +              K  +V    +E P  R    L+ 
Sbjct: 181 FAGVGERTREGNDLYHEFLDAGVIAKDAEGNATSDGSKVALVFGQMNEPPGARARVALSG 240

Query: 239 VTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI
Sbjct: 241 LTMAEYFRDQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQLQERI 300

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +   KG+IT+V ++ V  D+  DP   +  + LD    L+RS+AE G YP VDPL S 
Sbjct: 301 --TSTTKGSITSVQAIYVPADDLTDPAPAASFAHLDATTTLSRSIAELGIYPAVDPLDST 358

Query: 358 SRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           SR+ +     +        +   + +++  +DI  I G     +      V +   I  F
Sbjct: 359 SRVLEPRIVGEVHYSTARRVQETLQKYKSLQDIIAILGMDELSEED-KLTVARARKIQRF 417

Query: 417 LKQS 420
           L Q 
Sbjct: 418 LSQP 421


>gi|283795522|ref|ZP_06344675.1| ATP synthase F1, beta subunit [Clostridium sp. M62/1]
 gi|291077188|gb|EFE14552.1| ATP synthase F1, beta subunit [Clostridium sp. M62/1]
 gi|295091202|emb|CBK77309.1| ATP synthase F1 subcomplex beta subunit [Clostridium cf.
           saccharolyticum K10]
          Length = 462

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 192/408 (47%), Gaps = 17/408 (4%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           G I  +      V     +  ++   D +  +  +   + +V   +    V    +   E
Sbjct: 4   GRIVQVMGPVVDVLFEDGVLPHIK--DALKVKNGDRTCVMEVSQHLGNSTVRCIMLAASE 61

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +     V   G+  ++       GR+ N LG+ IDG +SL +G+    I    P   ++
Sbjct: 62  GLCRDMEVEATGKGIQVPVGDKTLGRLFNVLGETIDGGESL-EGEEHWVIHRDPPSFADQ 120

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
           + V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    ++   +    S+   V
Sbjct: 121 KPVVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGV 180

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253
           GER RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   +VL
Sbjct: 181 GERSREGNDLWTEMKESGVLSKTALVFGQMNEPPGARMRVAETGLTMAEYFRDREHQDVL 240

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     ++G++T+V +V
Sbjct: 241 LFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKEGSVTSVQAV 298

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  + 
Sbjct: 299 YVPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYET 358

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ +++E +DI  I G     +      V++   I  FL Q 
Sbjct: 359 ARRVQEVLQKYKELQDIIAILGMEELSEED-KNTVYRARKIQKFLSQP 405


>gi|254452564|ref|ZP_05066001.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 238]
 gi|198266970|gb|EDY91240.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 238]
          Length = 474

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 105/417 (25%), Positives = 183/417 (43%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V    +   + + +       D + +V   +  + V    +   E + 
Sbjct: 6   GKITQVIGAVVDVQFDKELPAILNALKTSNNGKDLVLEVAQHLGENTVRAIAMDATEGLV 65

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V        +       GR++N  G P+D    + K D    I  + P   ++   
Sbjct: 66  RGQEVIDQDSQITVPVGVATLGRILNVTGDPVDEKGPV-KTDQRRSIHGEAPKFEDQSTA 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 TEILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGVSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    LT +++AE F     
Sbjct: 185 TREGNDLYHEMIESGVINLDNLEESKIALVYGQMNEPPGARMRIALTGLSLAEQFRDDSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI       G+IT+
Sbjct: 245 SDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERIA--STRGGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R+++E+G YP VDPL S SRL D      +
Sbjct: 303 VQAVYVPADDLTDPAPATSFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             K+ + +  ++ R++  +DI  I G     +      V +   +  FL Q P D++
Sbjct: 363 HYKVATDVQQILQRYKSLQDIIAILGMDELSEDD-KMTVTRARKLERFLSQ-PFDVA 417


>gi|63253239|dbj|BAD98403.1| beta subunit of ATP synthesis [Davallia tasmani]
          Length = 464

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + ++ G      G    +       GR+ N LG+P+D    +  G     
Sbjct: 71  EVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TRFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +    + V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RQTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|330809240|ref|YP_004353702.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377348|gb|AEA68698.1| Putative flagellum-specific ATP synthase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 450

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 159/431 (36%), Positives = 249/431 (57%), Gaps = 8/431 (1%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG-QVIRINLD 68
           + +     L  + G +SSI  +    T L   V LG+ V +H  +  + +  +V+ +  +
Sbjct: 12  ITQLSQARLCRRLGRLSSIQGMVLHATGLD--VRLGELVDIHPARGGEVIAAEVVGLRSE 69

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
              + P G  + + L   V   G  + +   A   GRV++A   P+D   +  +G     
Sbjct: 70  STLLMPYGPVDGLCLASEVHARGTPYTVPVGASLLGRVLDATCNPLDDLPA-PEGLTRKP 128

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
                   ++R  ++    TG++ +D+FTPL  GQRIG+FAGSG+GKSTLL M ++    
Sbjct: 129 RFVAPINPLHRSPIDTTLLTGVKAVDVFTPLGRGQRIGIFAGSGVGKSTLLGMMSKYADA 188

Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           D ++I+L+GERGREV +FI D LG + LKK+VV+ A +++  +LR+ A  TA TIAE+F 
Sbjct: 189 DVIVIALIGERGREVGDFIRDSLGPEGLKKAVVIAAAAEQPAVLRRQAAYTATTIAEWFR 248

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           ++G +VLLI+DSITRFA + REI  ++GE   +RGY  SVF+ LP L+ER G    + G+
Sbjct: 249 AQGKHVLLIMDSITRFALAQREIGLSTGEPMGSRGYTPSVFALLPPLMERAGALNGQ-GS 307

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT V +VLV+GD+ N+P+AD +R+ILDGHIVL+RS+A  G +P +D L S+SRL     +
Sbjct: 308 ITGVYTVLVEGDDMNEPVADHMRAILDGHIVLSRSVAARGHWPAIDVLHSISRLVGALHT 367

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            + K  V  L   +  ++ + D+  +G Y  G   +LD  +   P     L+Q+P +  S
Sbjct: 368 PERKTQVERLRSALGNYQNSVDLIELGAYEKGSQPLLDTMIDLKPEFDALLQQTPQEHFS 427

Query: 427 EDVFQEITKKL 437
                +  ++L
Sbjct: 428 ASSTWQTVQQL 438


>gi|302747666|gb|ADL63314.1| Atp1 [Tamarix sp. Qiu 95034]
          Length = 349

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 152/352 (43%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGD 212
            +      GK+ +      +                 +   +G++   V + ++    G+
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSDSETLYCVYVAIGQKRSTVAQLVQILSEGN 177

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSLKLELAQ 349


>gi|51209972|ref|YP_063636.1| ATP synthase CF1 beta subunit [Gracilaria tenuistipitata var. liui]
 gi|75323126|sp|Q6B8S4|ATPB_GRATL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50657726|gb|AAT79711.1| ATP synthase CF1 beta subunit [Gracilaria tenuistipitata var. liui]
          Length = 475

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/417 (26%), Positives = 182/417 (43%), Gaps = 20/417 (4%)

Query: 20  VVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGI 77
           +   G ++ I      +     Q   + + +  +G  +    +V ++  D  V    +  
Sbjct: 6   IKNQGCVTQIIGPVLDIEFPNGQLPKVFNALKVKGPENIITCEVQQLLGDNRVRAVAMSS 65

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G    +       GR+ N LG+P+D    +   D S+ I    P   
Sbjct: 66  TEGLKRGIEVTDTGAPITVPVGIPTLGRIFNVLGEPVDNLGDIQSED-SLPIHRAAPSFT 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
             +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 125 QLETKPSIFETGIKVVDLLAPYRKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 184

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +  E+               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 185 GVGERTREGNDLYEEMKESKVINADNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYF 244

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    
Sbjct: 245 RDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTTD 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +   +
Sbjct: 303 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPS 362

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 IVGSQHYSTAQQIKSTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 418


>gi|33318657|gb|AAQ05212.1| ATP synthase beta subunit [Cedrus deodara]
          Length = 473

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 35  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 94

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 95  EPVDNLGPVD-ARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 153

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 154 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIPESKVAL 213

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 214 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 273

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 274 AVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 331

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 332 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 391

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 392 LSEED-RLIVARARKIERFLSQP 413


>gi|13236718|gb|AAK14664.1| ATP synthase beta subunit [Corypha utan]
          Length = 498

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFHPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDAGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|21633311|gb|AAM52130.1| ATP synthase beta subunit [Merremia hastata]
          Length = 467

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVKIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNLVRAVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P++    + + + +  I    P  + 
Sbjct: 81  DGLKRGMEVIDTGAPISVPVGGSTLGRIFNVLGQPVENLGPV-ETNTTSPIHRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 198 RGREVREFIEDYLGDNLKKSVV-----------VVATSDESPILRKMAPLTAVTIAEYFS 246
            G   RE  + YL       +            V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYLEXKESGXIXEDNXXXXXXXXVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|5758868|gb|AAD50842.1| ATP synthase beta subunit [Cryptanthus zonatus]
          Length = 496

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 179/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V +G+N   +GQ I +  ++        V    +   + 
Sbjct: 27  IGPVLDVVFPPGKMPNIYNALVVKGRN--TVGQQINVTCEVQQLLGNNRVRAVAMSATDG 84

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  +   
Sbjct: 85  LMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLD 143

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 144 TKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 203

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 204 ERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 263

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I R   +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+I
Sbjct: 264 NEQDVLLFIDNIFRLVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSI 321

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD    L+R LA +G YP VDPL S S +       
Sbjct: 322 TSIQAVYVPADDLADPAPATTFAHLDATTALSRGLAAKGIYPAVDPLDSTSTMLQPRIVG 381

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 382 EEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|295107875|emb|CBL21828.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus obeum A2-162]
          Length = 463

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +  +      + +V   +  D+V    +   E +
Sbjct: 4   GKIVQVMGPVVDVVFENGDLPDIKDALEVENNGKRCVMEVSQHLGNDVVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++    C  GR+ N LG  +DG D L   +    I    P    ++ 
Sbjct: 64  QRDREVIATGSGIKVPVGDCTLGRLFNVLGDTVDGGDQLDDAE-HWVIHRDPPSFEEQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    ++   +    S+   VGE
Sbjct: 123 AVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGNDLWSEMKESGVLEKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDQEHRDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI       G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STTSGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 361 RVQEILQKYKELQDIIAILGMEELSDED-KNTVFRARKIQKFLSQP 405


>gi|260780659|ref|YP_003227076.1| ATP synthase CF1 beta subunit [Bryopsis hypnoides]
 gi|260176737|gb|ACX33746.1| ATP synthase CF1 beta subunit [Bryopsis hypnoides]
          Length = 482

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/419 (26%), Positives = 184/419 (43%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPV 75
            G I+ I      V+   S+   + + +  +GKN          +V ++  D  V    +
Sbjct: 10  TGRITQIIGPVLDVSFPPSKMPNIYNSLKIEGKNGSGEDVCVTCEVQQLLGDHCVRAVSM 69

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V   G    +       GR+ N LG+ +D    +   +   +I    P 
Sbjct: 70  SATDGLMRGMEVIDTGNPLTVPVGETTLGRIFNVLGETVDNLGPVN-TETGFQIHRSAPA 128

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 129 FVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 188

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 189 FGGVGERTREGNDLYMEMKESKVINEDQLSESKVALVYGQMNEPPGARMRVGLTALTMAE 248

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ERI  +  
Sbjct: 249 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TST 306

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ ++ V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 307 KDGSITSIQAIYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQ 366

Query: 363 KAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +E      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 PWIVGEEHYACAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 424


>gi|289804513|ref|ZP_06535142.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 426

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 171/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    +G  + +  G  V        +       GR++N LG+P+D    +G+ +
Sbjct: 10  LGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEE 69

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P        ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 70  -RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 128

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 129 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 188

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 189 TMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 246

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 247 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 306

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +  ++ R++E +DI  I G     +      V +   I  FL 
Sbjct: 307 QLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEED-KLVVARARKIQRFLS 365

Query: 419 QS 420
           Q 
Sbjct: 366 QP 367


>gi|123325611|gb|ABM74430.1| ATP synthase beta subunit [Citrus gracilis]
          Length = 466

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATEGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|169786011|ref|XP_001827466.1| ATP synthase F1-sector subunit beta [Aspergillus oryzae RIB40]
 gi|238506943|ref|XP_002384673.1| ATP synthase F1, beta subunit, putative [Aspergillus flavus
           NRRL3357]
 gi|83776214|dbj|BAE66333.1| unnamed protein product [Aspergillus oryzae]
 gi|220689386|gb|EED45737.1| ATP synthase F1, beta subunit, putative [Aspergillus flavus
           NRRL3357]
          Length = 517

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/430 (25%), Positives = 185/430 (43%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
             G +  +      V    + +  + + +  +      + +V   +  ++V    +   E
Sbjct: 45  ATGKVHQVIGAVVDVKFEGEKLPAILNAIETENNGQKLVLEVSQHLGENVVRTIAMEGTE 104

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G      G    I       GR++N  G P+D    + K      I ++ P  + +
Sbjct: 105 GLTRGAAARDTGAPITIPVGPGTLGRILNVTGDPVDERGPV-KATKYAPIHAEAPEFVEQ 163

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+   V
Sbjct: 164 STEGEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGV 223

Query: 196 GERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           GER RE  +   +         +   K  +V    +E P  R    LT +TIAEYF  + 
Sbjct: 224 GERTREGNDLYHEMQETGVIQLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEE 283

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +   KG+IT
Sbjct: 284 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSIT 341

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D      
Sbjct: 342 SVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQ 401

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
           D     + +  ++  ++  +DI  I G     +      V +   +  FL Q     +  
Sbjct: 402 DHYDTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKLQRFLSQP---FTVA 457

Query: 428 DVFQEITKKL 437
            VF  I  KL
Sbjct: 458 QVFTGIEGKL 467


>gi|15828737|ref|NP_326097.1| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP]
 gi|81855822|sp|Q98QU5|ATPB1_MYCPU RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|14089679|emb|CAC13439.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis]
          Length = 475

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 187/408 (45%), Gaps = 17/408 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLG----DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           G I  I      ++   Q +       + V    K +  + Q I    ++V    +    
Sbjct: 7   GKIVQILGPVVDISFAGQKIPAIYNNLELVFENNKYNFEVAQHIG--DEVVRTISMVSTN 64

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +S G  V   G    +        R+ N LG+ ID    +   +    I +  P    +
Sbjct: 65  GLSRGLEVIDTGAPIMVPVGKEVLSRMFNVLGQTIDNKGEIEAKEFR-SIHASAPSYEEQ 123

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 124 NDSSEILETGIKVIDLLVPYSKGGKIGLFGGAGVGKTVLVQELINNIATQHGGLSVFAGV 183

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   + +   +  K+ +V    +E P  R    LT +T+AEYF  K   +VL
Sbjct: 184 GERTREGNDLYHEMIASGVLDKTTLVFGQMNEPPGARMRVALTGLTMAEYFRDKFKQDVL 243

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  + G+IT+V +V
Sbjct: 244 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKNGSITSVQAV 301

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD   VL R++A  G YP +DPLAS SR+ D      +   +
Sbjct: 302 YVPADDLTDPAPATTFTHLDAKTVLERNIAALGIYPAIDPLASSSRMLDPLIIGNEHYLV 361

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              + +++ RF+E +DI  I G     +    K V +   I +FL Q 
Sbjct: 362 ALEVQNILQRFKELQDIIAILGIGELSEED-KKLVFRARKIRNFLSQP 408


>gi|241912848|gb|ACS72102.1| AtpB [Cyclopogon peruvianus]
          Length = 489

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|171779638|ref|ZP_02920594.1| hypothetical protein STRINF_01475 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281740|gb|EDT47174.1| hypothetical protein STRINF_01475 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 468

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/413 (27%), Positives = 194/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLDI----VYICP 74
           +  G I+ +      V   +  +   + + ++       +   V+ + L++    V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFAAGDKLPEINNALIVYKNGDKSQKIVLEVALELGDGLVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  VF  GR   +       GRV N LG  ID D+   +      I  K P
Sbjct: 61  MESTDGLTRGLEVFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAEDAPRETIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 AFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQ 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYEVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|112791380|gb|ABI21960.1| ATP synthase beta subunit [Pectobacterium wasabiae]
          Length = 421

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGR 104
           D +  +      + +V + +   IV    +G  + +  G  V +      +       GR
Sbjct: 3   DALEVENGAEKLVLEVQQQLGGGIVRCIAMGSSDGLRRGLNVNNLDHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG PID    +G+ +    I    P        ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGDPIDMKGDIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|42559062|gb|AAS20217.1| ATP synthase beta subunit [Trillium grandiflorum]
          Length = 482

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
           + D +GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 43  SQDTVGQKINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRI 102

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 103 FNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 161

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 162 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAE 221

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 222 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 281

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 282 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 339

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  I
Sbjct: 340 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAI 399

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 400 LGLDELSEED-RLTVARARKIERFLSQP 426


>gi|110598291|ref|ZP_01386566.1| ATP synthase F1, beta subunit [Chlorobium ferrooxidans DSM 13031]
 gi|110340099|gb|EAT58599.1| ATP synthase F1, beta subunit [Chlorobium ferrooxidans DSM 13031]
          Length = 462

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 194/428 (45%), Gaps = 21/428 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPV 75
           +Q G IS I      V     +   + D +     +   L  V+     +  + V    +
Sbjct: 1   MQEGKISQIIGPVVDVDFPEGRLPSILDALTITRPDGTKL--VLETQQHLGEERVRTVSM 58

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + G   ++        R++N +G+PIDG   +     +  I    P 
Sbjct: 59  ESTDGLVRGTSVANTGMPIQVPVGPEVLSRMMNVVGEPIDGRGPVHTAK-TYSIHRSAPK 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
                   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +    +    +
Sbjct: 118 FDEISTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSV 177

Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            + VGER RE  +   + +    + K+ +V    +E P  R+   LT ++IAEYF  +  
Sbjct: 178 FAGVGERTREGNDLWHEMMESGVIDKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEEG 237

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L +RI     +KG++T+
Sbjct: 238 RDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQDRI--VSTKKGSVTS 295

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D
Sbjct: 296 VQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGDD 355

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
                 ++  L+ R+++ +DI  I G     D      V +   +  FL Q        +
Sbjct: 356 HYDTAQAVKQLLQRYKDLQDIIAILGMDELSDED-KLVVSRARKVQRFLSQP---FFVAE 411

Query: 429 VFQEITKK 436
            F  +  K
Sbjct: 412 AFTGLAGK 419


>gi|37720977|gb|AAN32491.1| ATP synthase beta subunit [Alania endlicheri]
          Length = 497

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    Q   + + ++ +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGQMPNIYNALIVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVX-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+ +  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVXLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|327441428|dbj|BAK17793.1| F0F1-type ATP synthase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 471

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 170/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V + G    +       GRV N LG+ ID  + + 
Sbjct: 49  ALHLGDDSVRTIAMSSTDGLQRGAEVTNSGAPISVPVGEATLGRVFNVLGEVIDLGEEIP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 AEVRRDSIHREAPTFDELSTTVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      +K++ +V    +E P  R    L
Sbjct: 169 LINNIAQEHAGISVFAGVGERTREGNDLFFEMTDSGVIKQTAMVFGQMNEPPGARMRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEFFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 289 RI--TSTTKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +   I R+ E +DI  I G     D    K V +   I 
Sbjct: 347 STSRALSPEIVGPEHYAIATGVQRTIQRYRELQDIIAILGMDELGDED-KKTVERARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|61196968|gb|AAX39469.1| ATP synthase beta subunit [Nitella hyalina]
          Length = 402

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGQTTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|17224707|gb|AAL37075.1| ATP synthase beta subunit [Dioscorea nipponica]
          Length = 474

 Score =  275 bits (702), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 10  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVA 67

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 68  MSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 126

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 127 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 186

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 187 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 246

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 247 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 304

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 305 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 364

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 365 QPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|241912908|gb|ACS72132.1| AtpB [Sauroglossum corymbosum]
          Length = 489

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|241912904|gb|ACS72130.1| AtpB [Sarcoglottis acaulis]
          Length = 489

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|172036418|ref|YP_001802919.1| F0F1 ATP synthase subunit alpha [Cyanothece sp. ATCC 51142]
 gi|171697872|gb|ACB50853.1| ATP synthase F1, alpha subunit [Cyanothece sp. ATCC 51142]
          Length = 502

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/433 (26%), Positives = 193/433 (44%), Gaps = 15/433 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           ++  L  L +   +Y   +   + G + SI      V  L   V   + V   G   D L
Sbjct: 9   LENTLTQLDETLNNYQAKIQPREIGILKSIDQGVAKVIGL-PNVKADELVRFPG---DIL 64

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G    +++D + +  +G  E +  G  V   G+  +I       GR+++ LG+P+D   +
Sbjct: 65  GIAFNLDVDELGVILLGNSEHLEAGQEVKRTGKIVQIPVGEALLGRIVDGLGRPLDNQGT 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    I  K PP ++R  V    +TG++V+D   P+  GQR  +     IGK+ + 
Sbjct: 125 IS-TETQFPIERKAPPFIHRAPVTVPLQTGLKVVDALIPVGRGQRELIIGDRQIGKTAIA 183

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAP 235
             ++  + D     I   +G+R   V + IE     + L  S+VVVA  ++ P L+ + P
Sbjct: 184 VDTILNQKDKDVICIYCAIGQRTSAVAKVIEQLRQAEALDYSIVVVADGEDPPGLQYITP 243

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A +I EYF  KG +VL++ D +TR A + RE++      P    YP  +F    RLLE
Sbjct: 244 YAATSIGEYFMEKGRDVLIVYDDLTRHAWAYRELSLLLRRPPGREAYPGDIFYIHSRLLE 303

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +E   G++TA+  +     + +  I  ++ SI DG I L+  L ++G  P V  
Sbjct: 304 RSTHLREEWGGGSLTALPIIETQAQSISAYIPTNLISITDGQIYLSPDLYQKGILPAVSV 363

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  K       ++   L     +F+E       G     +D    + + +   +
Sbjct: 364 GKSVSRVGGKTQLRAYGEVAGDLRLSYSQFQEVEVFARFG---TQLDEDTRQTLERGRRV 420

Query: 414 YDFLKQSPSDLSS 426
            + LKQ  S   S
Sbjct: 421 REILKQPQSHPLS 433


>gi|158340806|ref|YP_001521974.1| F0F1 ATP synthase subunit alpha [Acaryochloris marina MBIC11017]
 gi|190358149|sp|A8ZNS4|ATPA2_ACAM1 RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|158311047|gb|ABW32660.1| ATP synthase F1, alpha subunit [Acaryochloris marina MBIC11017]
          Length = 513

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 181/431 (41%), Gaps = 15/431 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +Q       Q+  +Y   L  Q  G ++S+       T L Q     + V   G   D +
Sbjct: 13  LQHIFAAFDQVEGEYPFELQSQEIGIVTSLGHGIARATGLLQVQSE-ELVKFPG---DRM 68

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G    ++ D V +  +  G  +  G  V   GR   +       GRV++A G+P+D    
Sbjct: 69  GLAFNLDPDEVGLILLDDGHSLKAGCEVQRTGRVLDVPVGEGLLGRVVDATGRPLDQRG- 127

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L        +  + P  M+R  V    +TGI+ ID   P+  GQR  +      GK+ + 
Sbjct: 128 LVTAQERRPVEREAPAIMDRAPVTVPLQTGIKAIDALIPIGRGQRELIVGDRQTGKTAIA 187

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDE-SPILRKMAP 235
             ++  + D     +   +G+R   V + I +          +VV    E SP L+ + P
Sbjct: 188 VDTILNQKDQDVICVYCAIGQRSSAVAKLIAELRNRGAMDYCIVVVAEGEASPGLQYITP 247

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A T+AEYF  +G +VL++ D + + A + RE++      P    +P  +F    RLLE
Sbjct: 248 YAATTMAEYFMEQGQDVLIVYDDLIQHARAYRELSLLLRRPPGREAFPGDIFYIHARLLE 307

Query: 296 RIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  V  +  N +  I  ++ SI DG I L   L ++G +P VD 
Sbjct: 308 RATCLRPELGGGSLTALPIVETEAQNLSAYIPTNLVSITDGQIYLTPDLFQKGIFPAVDV 367

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  KA     + +   L     +FEE       G     ++    +++ +   +
Sbjct: 368 GKSVSRVGGKAQLPAYRDVAGDLRLSYTQFEELESFARFG---TRLEESTRQSLERGRRV 424

Query: 414 YDFLKQSPSDL 424
            + L+Q     
Sbjct: 425 REVLQQPQFQP 435


>gi|7620565|gb|AAF64669.1| F1 ATPase alpha subunit [Zamia furfuracea]
          Length = 392

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 84/400 (21%), Positives = 151/400 (37%), Gaps = 23/400 (5%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
                 V   S  +  G+ V      S   G  +    + V I   G    I  GDLV  
Sbjct: 1   GDGIARVYG-SNEIQAGEMVEFA---SGVKGIALNPENENVGIVVFGSDTAIKEGDLVKR 56

Query: 90  WGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
            G    +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG
Sbjct: 57  TGSIVDVPVGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTG 115

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGE 197
           ++ +D   P+  GQR  +      GK+ +      +                 +   +G+
Sbjct: 116 LKAVDSPVPIGRGQREPIIGDRQTGKTAIAIDTISNQKRMNSKGTSESEKLYRVYVAIGQ 175

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           +   V + ++   G D  +  ++V AT+ +    + +AP       EYF   G +  +I 
Sbjct: 176 KRSTVAQLVQILSGADASEYPIIVAATASDPAPPQFLAPYPGCAAGEYFRDNGMHASIIY 235

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D  ++ A + R+++      P     P  V     RL ER      +   G++TA+  + 
Sbjct: 236 DDPSKQAVAYRQMSLLLRRPPGREASPGDVLYLHSRLSERAAKRSDQTGAGSLTALPVIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  I  +V SI DG I     L   G  P ++   SVSR+   A     +++  
Sbjct: 296 TQAGDVSAYIPTNVISITDGQIRSETELFYRGIRPAINVGLSVSRVGSAAQLKAMRQVRG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S    + ++ E   +     +   +D       ++   + 
Sbjct: 356 SSKPELAQYRE---VAASAQFGSDLDAATQAPFNRGARLT 392


>gi|260576484|ref|ZP_05844474.1| ATP synthase F1, beta subunit [Rhodobacter sp. SW2]
 gi|259021367|gb|EEW24673.1| ATP synthase F1, beta subunit [Rhodobacter sp. SW2]
          Length = 476

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/423 (24%), Positives = 182/423 (43%), Gaps = 20/423 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
            +    G I+ +      V        + + +         + +V   +    V    + 
Sbjct: 2   AIAKATGKITQVIGAVVDVQFEGDLPAILNALETHNNGKRLILEVAQHLGESTVRTIAMD 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G+ V   G    +       GR++N +G+P+D    +   +    I    P  
Sbjct: 62  ATEGLVRGEPVADTGAPISVPVGDATLGRILNVIGEPVDEKGPVNATEYRA-IHQPAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +        TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 121 SEQATESLILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVF 180

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   + +             K  +V    +E P  R    L+ +T+AE 
Sbjct: 181 AGVGERTREGNDLYHEMIESGVINIDNLAESKVALVYGQMNEPPGARLRVALSGLTLAEQ 240

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 241 FRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D 
Sbjct: 299 AGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDP 358

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +  +   ++  ++ R++  +DI  I G     +      V +   I  FL Q P 
Sbjct: 359 VVVGVEHYETARAVQGVLQRYKSLQDIIAILGMDELSEDD-KLTVSRARKIQRFLSQ-PF 416

Query: 423 DLS 425
           D++
Sbjct: 417 DVA 419


>gi|255281451|ref|ZP_05346006.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
 gi|255267939|gb|EET61144.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469]
          Length = 466

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 186/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  I      V    + V  + + +  + +      +V  ++    V    +   E +
Sbjct: 4   GKIIRIMGPVVDVRFADEKVPKIKEALTVEAEGQKRTMEVAQQLGDGEVRCIMLDASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S G  V   G    +       GR+ N LG+ ID  ++  KG+ +  I  K P    +  
Sbjct: 64  SKGMPVSATGSGISVPVGKDTLGRMFNVLGEAIDEKET-PKGEETWCIHRKAPAFEKQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 AVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL-I 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  K    +L  
Sbjct: 183 RSREGNDLYLEMKDSGVLDKTALVFGQMNEVPGARMRVAQTGLTMAEYFRDKKQQDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +EL  L ERI  +    G+IT+V +V V
Sbjct: 243 IDNIYRFVQAGSEVSALLGRMPSAVGYQPTLANELGELQERI--TSTTDGSITSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +      
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEAEIVGEEHYDTAM 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  L+ +++E +DI  I G    +D     AV++   I  FL Q 
Sbjct: 361 KVQQLLQKYQELQDIISILGMDE-LDEEDKTAVYRARKIQKFLSQP 405


>gi|162147452|ref|YP_001601913.1| flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786029|emb|CAP55611.1| Flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 455

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 175/445 (39%), Positives = 258/445 (57%), Gaps = 21/445 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG-KNSDNLGQVIRINLDIV 70
           A  +   + V  G ++ ++ +  +++ L  +  +GD V   G    +    ++  +++  
Sbjct: 7   APRHDVPVGVLEGRVTGLSGLTVSLSGLRDFTGVGDRVTIFGLDGRETDADILPFHINTA 66

Query: 71  YICPVGIGEEISLGDL------------VFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
            I P G  E I  G                  G      +  W GRVI+ +G+PIDG   
Sbjct: 67  IIMPYGSLEGIGSGCRAMFQLFDPEQRRRRAGGTL--VVNDAWQGRVIDPMGRPIDGKGP 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L    +  ++ +  P A  R R+      G+RV+++F     GQR+G+FAGSG+GKSTL+
Sbjct: 125 LPPDGVPQKLHAPPPEAALRARLGPRIDLGVRVLNLFATCREGQRLGLFAGSGVGKSTLM 184

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237
            M AR+   D  +I+LVGERGREVREF+ED LG + L KSVVVVATSD SP++R+ A   
Sbjct: 185 GMLARNTDCDVAVIALVGERGREVREFVEDDLGPEGLAKSVVVVATSDTSPLMRREAAYA 244

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           A   AE+F  +G +VLL++DS+TRF  ++REI  +SGE P  RGYP SVF+ELPRLLER 
Sbjct: 245 ATAAAEHFRDQGKSVLLLMDSVTRFCQALREIGLSSGEPPATRGYPPSVFAELPRLLERA 304

Query: 298 GPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           GP     + + G ITA+ SVLV+GD+HN+P+AD+VR ILDGH+V+ R +AE GRYP ++ 
Sbjct: 305 GPGLPGPDGKAGQITAMFSVLVEGDDHNEPVADAVRGILDGHVVMERRIAESGRYPAINV 364

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
           L S+SR      SA+E  L       +  +EE +D+  +G YR G D  +D+A+   P I
Sbjct: 365 LRSLSRTVPGCNSAEENALTRDARADLSTWEEMQDMVRLGAYRAGNDPKVDQAIRIAPAI 424

Query: 414 YDFLKQSPSDLSS-EDVFQEITKKL 437
            + L+Q   + ++  + F  +   L
Sbjct: 425 EEILRQGRGEKATIAESFDALRAAL 449


>gi|28188329|gb|AAL92544.1| ATP synthase beta subunit [Coleochaete sp. 327d3]
          Length = 399

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDST- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|28188337|gb|AAL92548.1| ATP synthase beta subunit [Coleochaete nitellarum]
          Length = 400

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDST- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  ITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGKEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|239637396|ref|ZP_04678378.1| ATP synthase F1, beta subunit [Staphylococcus warneri L37603]
 gi|239596996|gb|EEQ79511.1| ATP synthase F1, beta subunit [Staphylococcus warneri L37603]
 gi|330684792|gb|EGG96485.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU121]
          Length = 470

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + +     G  +  L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPDINNALIIEVPKEDGTLNLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G+   +       GRV N LG+ ID ++ +        I  + P   
Sbjct: 64  TDGVQRGMDVKDTGKDISVPVGDETLGRVFNVLGETIDLEEKIDDSVRRDPIHRQSPGFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVEILETGIKVVDLLAPYIKGGKVGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+ +T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDSTTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +   + ++ E +DI  I G     +    + V +   I  FL Q+
Sbjct: 362 EVARGVQSTLQKYRELQDIIAILGMDELSEED-RQTVERARRIQFFLSQN 410


>gi|3273594|gb|AAC24779.1| F1-ATPase alpha subunit [Trillium grandiflorum]
          Length = 421

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/409 (21%), Positives = 160/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V I   G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G            GRV+ ALG PIDG  +L   +    +  K P  +  + V +  +
Sbjct: 58  KRTGSIVDVXAGKAMLGRVVXALGVPIDGRGALSDHE-RRRVEVKAPGIIEXKSVHEPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLV 195
            G++ +D    +  GQR  +      GK+ +      +                 +   +
Sbjct: 117 XGLKAVDSXVXIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N    S++V AT+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANAMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G+ TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGRGLFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D      +++   + +  KQ  
Sbjct: 357 XGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQPQ 402


>gi|253680875|ref|ZP_04861678.1| ATP synthase F1, beta subunit [Clostridium botulinum D str. 1873]
 gi|253562724|gb|EES92170.1| ATP synthase F1, beta subunit [Clostridium botulinum D str. 1873]
          Length = 463

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/405 (28%), Positives = 191/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S  +  + + +     +   + +V   I  D+V    +   E +
Sbjct: 6   GKVVQVIGPVIDIKFDSDCLPNIYNAIEIDMGDKVLITEVEQHIGDDVVRTIAMESTEGL 65

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G    + G+   +       GR+ N LGK ID D +  K +    I    P    +  
Sbjct: 66  KRGMKAVNTGKPISVPVGTEILGRLFNVLGKTIDEDGNF-KAEQYYPIHRPAPTFEEQSV 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 125 EPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G +VLL +
Sbjct: 185 RTREGNDLYYEMKESGVINKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFI 244

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V 
Sbjct: 245 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVP 302

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +   +   
Sbjct: 303 ADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDIAIK 362

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + H++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 363 VKHILERYKELQDIIAILGVDELSEED-KLVVSRARKVQRFLSQP 406


>gi|241912866|gb|ACS72111.1| AtpB [Manniella cypripedioides]
          Length = 489

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|309812184|ref|ZP_07705942.1| ATP synthase F1, alpha subunit [Dermacoccus sp. Ellin185]
 gi|308433871|gb|EFP57745.1| ATP synthase F1, alpha subunit [Dermacoccus sp. Ellin185]
          Length = 546

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 93/447 (20%), Positives = 174/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y      +   G +         V  L       + +  +      LG   
Sbjct: 15  DALNGYVQSYEPGAASREEVGRVVDAADGIAHVEGL-PSAMTNELLQFEDG---TLGIAQ 70

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +++  + +  +G    I  G  V   G    +     + GRV+N LG+PIDG   + + 
Sbjct: 71  NLDVHEIGVVILGEFGGIEEGQSVKRTGEVLSVPVGDAFMGRVVNPLGQPIDGLGDI-EA 129

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  + P  + R+ V +   TGI+ ID  TP+  GQR  +      GK+T+ +   
Sbjct: 130 EGRRALELQAPTVVQRKSVHEPLMTGIKAIDAMTPVGRGQRQLIIGDRKTGKTTIATDTI 189

Query: 183 RSDCFD----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
            +   +          + I   VG++   V E             + +V A + ++   +
Sbjct: 190 INQKQNWETGDPSKQVRCIYVAVGQKNSTVAEVRATLEEAGAMEYTTIVNAPAGDAAGFK 249

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +++ A + R ++      P    YP  VF    
Sbjct: 250 YLAPFTGSAIGQHWMYQGKHVLIVFDDLSKQAEAYRAMSLLLRRPPGREAYPGDVFYLHS 309

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++T +  +     + +  I  +V SI DG I L   L    + P
Sbjct: 310 RLLERCAKLSDDLGAGSMTGLPIIETKAGDVSAYIPTNVISITDGQIFLQADLFNANQRP 369

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            VD   SVSR+   A +   K +  S+   + +F E +       +   +D    + + +
Sbjct: 370 AVDVGISVSRVGGAAMTKAMKAVTGSIKVDLAQFREMQ---AFAMFASDLDAASRRQLAR 426

Query: 410 VPIIYDFLKQSPS-DLSSEDVFQEITK 435
              + +  KQ  +     ED    +  
Sbjct: 427 GERLMEMFKQPQNSPYPVEDQVASLWA 453


>gi|296876800|ref|ZP_06900848.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432302|gb|EFH18101.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 15912]
          Length = 468

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 118/415 (28%), Positives = 188/415 (45%), Gaps = 26/415 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD--------FVVHQG---KNSDNLGQVIRINLDIVYI 72
           G IS +      V        +GD         VV++    K+   L   + +   +V  
Sbjct: 4   GKISQVVGPVVDVAF-----SVGDKLPEINNALVVYKNDQQKSKVVLEVALELGDGVVRT 58

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   GR   +       GRV N LG  ID D    +      I  K
Sbjct: 59  IAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDQPFAEDAPRDSIHKK 118

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P        E+  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   
Sbjct: 119 APSFDELSTSEEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGG 178

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF  
Sbjct: 179 ISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRD 238

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+
Sbjct: 239 VEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGS 296

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           +T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR       
Sbjct: 297 VTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIV 356

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + S +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 357 GEEHYAVASEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQFFLSQN 410


>gi|6017828|gb|AAF01648.1| ATP synthase beta subunit [Xanthorhiza simplicissima]
          Length = 477

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 183/419 (43%), Gaps = 29/419 (6%)

Query: 25  YISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICPV 75
            I+ I      V+  +  +  + + +V +G+  D +GQ I +  ++        V    +
Sbjct: 1   RIAQIIGPVLDVSFPAGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVAM 58

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P 
Sbjct: 59  SATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPA 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +        F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 118 FIQLDTKLSIFETGIXVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 177

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 178 FGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAE 237

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 238 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 295

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 296 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 355

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 PRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 413


>gi|302747370|gb|ADL63166.1| Atp1 [Byblis liniflora]
          Length = 349

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AVEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|254229975|ref|ZP_04923376.1| ATP synthase F1, beta subunit [Vibrio sp. Ex25]
 gi|262392804|ref|YP_003284658.1| ATP synthase subunit beta [Vibrio sp. Ex25]
 gi|269965297|ref|ZP_06179418.1| ATP synthase subunit B [Vibrio alginolyticus 40B]
 gi|114573|sp|P12986|ATPB_VIBAL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|48339|emb|CAA34181.1| unnamed protein product [Vibrio alginolyticus]
 gi|151937477|gb|EDN56334.1| ATP synthase F1, beta subunit [Vibrio sp. Ex25]
 gi|262336398|gb|ACY50193.1| ATP synthase beta chain [Vibrio sp. Ex25]
 gi|269830098|gb|EEZ84326.1| ATP synthase subunit B [Vibrio alginolyticus 40B]
          Length = 467

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 183/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSNVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I    P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEVGAEEV-YSIHRSAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNEIALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYYEMQEAGVVNVEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D  ++   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQDHYEVARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|315618560|gb|EFU99146.1| ATP synthase F1, beta subunit [Escherichia coli 3431]
          Length = 429

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/376 (28%), Positives = 177/376 (47%), Gaps = 11/376 (2%)

Query: 52  QGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINAL 109
           Q  N   + +V + +   IV    +G  + +  G  V        +       GR++N L
Sbjct: 2   QNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVL 61

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++G+F G
Sbjct: 62  GEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGG 120

Query: 170 SGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           +G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V    +
Sbjct: 121 AGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMN 180

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  +
Sbjct: 181 EPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPT 240

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           +  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  
Sbjct: 241 LAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASL 298

Query: 346 GRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           G YP VDPL S SR  D      +       +  ++ R++E +DI  I G     +    
Sbjct: 299 GIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEED-K 357

Query: 405 KAVHQVPIIYDFLKQS 420
             V +   I  FL Q 
Sbjct: 358 LVVARARKIQRFLSQP 373


>gi|119350523|gb|ABL63212.1| AtpB [Oedogonium cardiacum]
          Length = 392

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 164/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           +    +   E +  G  V   G    +       GR+ N LG+P+D    + + +  + I
Sbjct: 5   IRAVAMNPTEGLMRGMEVVDTGNPLLVPVGKDTLGRIFNVLGEPVDNMGPV-QTEEKLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P   +       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRPAPAFTDLDTRLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYMEMKESKVIVEDNLGESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  S LD   VL+R LA +G YP VDPLAS
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRGLAAKGIYPAVDPLAS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D        +   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGDAHYNCAQKVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|23503627|dbj|BAC20410.1| ATP synthase beta-subunit [Pseudocarteria mucosa]
          Length = 376

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 168/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   GR   +       GR+ N LG+P+D    + + + ++ I  +
Sbjct: 1   VAMNPTDGLTRGMEVLDTGRPLSVPVGKVTLGRIFNVLGEPVDNLGPV-ETEETLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVSLVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP      S LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPAVTFSHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   S+   + R++E +DI  I G     +      V +   I  +L 
Sbjct: 298 MLQPWILGEKHYECAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERYLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|123325613|gb|ABM74431.1| ATP synthase beta subunit [Citrus halimii]
 gi|123325635|gb|ABM74442.1| ATP synthase beta subunit [x Citrofortunella microcarpa]
 gi|123325659|gb|ABM74454.1| ATP synthase beta subunit [Limonia acidissima]
 gi|123325693|gb|ABM74471.1| ATP synthase beta subunit [Microcitrus papuana]
          Length = 461

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|157678803|dbj|BAF80642.1| ATP synthase CF1 alpha chain [Proteomonas sulcata]
          Length = 357

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 11/361 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            V  L Q V  G+ +  + +    +G  + +  D V +  +G G  I  G  V   G+  
Sbjct: 1   RVYGLDQ-VMAGELLEFEDQ---TVGIALNLESDNVGVVLMGEGRAILEGSSVKATGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           ++     + GRV+NALG PIDG   +   D  + I S  P  + R+ V +  +TGI  ID
Sbjct: 57  QVPVGDGYLGRVVNALGVPIDGKGDIQTTDSRL-IESGAPGIIARKSVCEPIQTGITAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+   + ++  +       +   +G++   V     D   
Sbjct: 116 SMIPIGRGQRELIIGDRQTGKTSVAIDTIINQQTEDVVCVYVAIGQKAAGVAAVAGDLEE 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            N    +V+V A +D+   L+ +AP T   IAEYF  KG   L+I D +++ A + R+++
Sbjct: 176 RNALSYTVIVAANADDPATLQYIAPYTGAAIAEYFMYKGQATLVIYDDLSKQASAYRQMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERAPKLSDKLGGGSMTALPIIETQAGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  L   G  P ++   SVSR+   A     K++   L   + +F E   
Sbjct: 296 ISITDGQIFLSGDLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEA 355

Query: 389 I 389
            
Sbjct: 356 F 356


>gi|6634488|emb|CAB64375.1| ATP synthase [Citrus trifoliata]
          Length = 482

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 40  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 99

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 100 IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 158

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 159 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLS 218

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 219 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 278

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 279 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 336

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 337 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 396

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 397 ILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|114695|sp|P25075|ATPB_BACFI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 467

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 169/368 (45%), Gaps = 16/368 (4%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFH---WG-RFRISPSACWCGRVINALGKPIDGDD 117
            I +  D V    +G  + +     V+     G    +       GRV N LG+ ID  +
Sbjct: 50  AIALGDDSVRTVAMGSTDGLY----VYRGTDTGAPISVPVGEATLGRVFNVLGEAIDLGE 105

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D    I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L
Sbjct: 106 PVAADDKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYIIGGKIGLFGGAGVGKTVL 165

Query: 178 LSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           +     +   +  +IS+   VGER RE  +   +      +KKS +V    +E P  R  
Sbjct: 166 IQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIKKSAMVFGQMNEPPGARMA 225

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
             L+ +T+AE+F  +    +L+      F  +  E++   G +P A GY  ++ +E+ +L
Sbjct: 226 VALSGLTMAEHFRDRDGQDVLLFVDNISFTQAGSEVSALLGRMPSAVGYQPTLATEMGQL 285

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDP
Sbjct: 286 QERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDP 343

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           LAS SR         +   +   +   + +++E +DI  I G     +      VH+   
Sbjct: 344 LASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAILGMDELSEED-KLVVHRARR 402

Query: 413 IYDFLKQS 420
           I  FL Q+
Sbjct: 403 IQFFLSQN 410


>gi|304398017|ref|ZP_07379892.1| ATP synthase F1, beta subunit [Pantoea sp. aB]
 gi|308188719|ref|YP_003932850.1| membrane-bound ATP synthase, F1 sector, beta- subunit [Pantoea
           vagans C9-1]
 gi|304354303|gb|EFM18675.1| ATP synthase F1, beta subunit [Pantoea sp. aB]
 gi|308059229|gb|ADO11401.1| membrane-bound ATP synthase, F1 sector, beta- subunit [Pantoea
           vagans C9-1]
          Length = 465

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/412 (27%), Positives = 184/412 (44%), Gaps = 15/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V  G     L    ++   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQDAVPQVYSALEVMNGDARLVLEVQQQLGGGVVRTIAMGTS 60

Query: 79  EEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM----EIMSKVP 133
           + +  G  V       ++       GR++N LG+PID    L + D S      I    P
Sbjct: 61  DGLKRGLNVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     
Sbjct: 121 SYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYS 180

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +F  +    N + K  +V    +E P  R    LT +T+AE F  +G
Sbjct: 181 VFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 241 RDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL S SR  D      +
Sbjct: 299 VQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  L+ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 HYDVARGVQSLLQRYQELKDIIAILGMDELSEED-KLLVARARKIQRFLSQP 409


>gi|260774524|ref|ZP_05883437.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14]
 gi|260610430|gb|EEX35636.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14]
          Length = 467

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 183/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +  Q      + +V + +   I+    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSSVPSVYDALNVQDSKERLVLEVQQQLGGGIIRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + +  I    P    
Sbjct: 61  DGLRRGMTVENTGGPISVPVGIKTLGRIMNVLGDAIDERGEIGAEE-TYSIHRLAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYHEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDVARGVQSTLQRYKELKDIIAILGMDELSESD-KQVVARARKIERFLTQP 411


>gi|6017812|gb|AAF01640.1| ATP synthase beta subunit [Myrothamnus flabellifolia]
          Length = 479

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 178/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVAFPRGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D          S  I    P
Sbjct: 60  MXATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPXXXXTXS-PIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+  LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSXGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|110915682|gb|ABH02629.1| ATP synthase beta subunit [Nicoraepoa andina]
          Length = 474

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 166/379 (43%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 36  NVTCEVQQLLGNNRVXAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 95

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 96  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 154

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 155 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 214

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 215 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 274

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+ T++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 275 QPTLSTEMGSLQERIA--STKKGSXTSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 332

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 333 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 392

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  F  Q 
Sbjct: 393 D-RLTVARARKIERFXSQP 410


>gi|123325579|gb|ABM74414.1| ATP synthase beta subunit [Atalantia monophylla]
 gi|123325587|gb|ABM74418.1| ATP synthase beta subunit [Citrus x paradisi]
 gi|123325591|gb|ABM74420.1| ATP synthase beta subunit [x Citrofortunella sp. PI 539802]
 gi|123325597|gb|ABM74423.1| ATP synthase beta subunit [Citrus maxima]
 gi|123325599|gb|ABM74424.1| ATP synthase beta subunit [Citrus sp. 'amboinensis']
 gi|123325605|gb|ABM74427.1| ATP synthase beta subunit [Citrus aurantium]
 gi|123325607|gb|ABM74428.1| ATP synthase beta subunit [Citrus bergamia]
 gi|123325609|gb|ABM74429.1| ATP synthase beta subunit [Citrus celebica]
 gi|123325615|gb|ABM74432.1| ATP synthase beta subunit [Citrus hystrix]
 gi|123325619|gb|ABM74434.1| ATP synthase beta subunit [Citrus indica]
 gi|123325621|gb|ABM74435.1| ATP synthase beta subunit [Citrus jambhiri]
 gi|123325625|gb|ABM74437.1| ATP synthase beta subunit [Citrus latifolia]
 gi|123325637|gb|ABM74443.1| ATP synthase beta subunit [Citrus maxima]
 gi|123325639|gb|ABM74444.1| ATP synthase beta subunit [Citrus medica]
 gi|123325641|gb|ABM74445.1| ATP synthase beta subunit [Citrus myrtifolia]
 gi|123325643|gb|ABM74446.1| ATP synthase beta subunit [Citrus obovoidea]
 gi|123325645|gb|ABM74447.1| ATP synthase beta subunit [Citrus x paradisi]
 gi|123325647|gb|ABM74448.1| ATP synthase beta subunit [Citrus reticulata]
 gi|123325661|gb|ABM74455.1| ATP synthase beta subunit [Feroniella oblata]
 gi|123325671|gb|ABM74460.1| ATP synthase beta subunit [Citrus hybrid cultivar]
 gi|123325685|gb|ABM74467.1| ATP synthase beta subunit [Microcitrus australasica]
 gi|123325695|gb|ABM74472.1| ATP synthase beta subunit [Microcitrus warburgiana]
          Length = 466

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|7708672|emb|CAB90094.1| ATP synthase beta subunit [Tecophilaea cyanocrocus]
          Length = 493

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAIA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 77  LSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTS-PIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|6017785|gb|AAF01627.1| ATP synthase beta subunit [Corydalis nobilis]
          Length = 489

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 70  MSATDGLMRGMDVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRXXXPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGQEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|284504908|gb|ADB91403.1| ATP synthase alpha subunit [Lactococcus garvieae]
          Length = 383

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/388 (24%), Positives = 159/388 (40%), Gaps = 14/388 (3%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF 88
           I         L +    G+ V          G    ++   V I  +G    I  GD V 
Sbjct: 3   IGDGIARAYGL-ENAMSGELVEFDNG---VYGMAQNLDSTDVGIIVLGDFLSIREGDTVK 58

Query: 89  HWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
             G+   I       GRV+NALG+P+DG   +  G  +  + +     M R+ V +  +T
Sbjct: 59  RTGKIMEIQVGEELIGRVVNALGQPVDGLGDINTGK-TRPVEAPASGVMQRKSVSEPLQT 117

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREF 205
           G++ ID   P+  GQR  +      GK+++      +        I   +G++   VR  
Sbjct: 118 GLKAIDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGKDIICIYVAIGQKESTVRTQ 177

Query: 206 IEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           +E       +  ++VV A++ +   L  +AP     + E F   G +VL++ D +++ A 
Sbjct: 178 VEALRKLGAMDYTIVVTASASQPSPLLYIAPYAGAAMGEEFMYNGKHVLVVYDDLSKQAV 237

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + RE++      P    YP  VF    RLLER      +   G++TA+  +     + + 
Sbjct: 238 AYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAQLSDDLGGGSMTALPFIETQAGDISA 297

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            IA +V SI DG I L   L   G  P +D  +SVSR+   A     KK+  +L   +  
Sbjct: 298 YIATNVISITDGQIFLENDLFYSGIRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRLDLAS 357

Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQV 410
           F E         +   +D      +++ 
Sbjct: 358 FRELE---AFTQFGSDLDEATQAKLNRG 382


>gi|123325653|gb|ABM74451.1| ATP synthase beta subunit [Citrus tachibana]
 gi|123325689|gb|ABM74469.1| ATP synthase beta subunit [Microcitrus garrowayae]
          Length = 462

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|119350521|gb|ABL63211.1| AtpB [Neochloris vigensis]
          Length = 390

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 165/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+ +D    +   + ++ I
Sbjct: 4   VRAVAMNPTDGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEAVDNMGPVQNME-TLPI 62

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 63  HRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 122

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 123 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALT 182

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 183 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 242

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 243 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 300

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +   +   S+   + R++E +DI  I G     +      V +   +  
Sbjct: 301 TSTMLQPWILGEKHYECAQSVKRTLQRYKELQDIIAILGLDELSEED-RLIVARARKVER 359

Query: 416 FLKQS 420
           FL Q 
Sbjct: 360 FLSQP 364


>gi|61196962|gb|AAX39466.1| ATP synthase beta subunit [Lamprothamnium heraldii]
          Length = 402

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRAAPAFTQLDTQLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|17224729|gb|AAL37086.1| ATP synthase beta subunit [Dioscorea schimperiana]
          Length = 481

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDNLGPVD-TRTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|70725933|ref|YP_252847.1| F0F1 ATP synthase subunit beta [Staphylococcus haemolyticus
           JCSC1435]
 gi|118573757|sp|Q4L7Y4|ATPB_STAHJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|68446657|dbj|BAE04241.1| ATP synthase beta chain [Staphylococcus haemolyticus JCSC1435]
          Length = 470

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           +  G ++ +      V      V       + +     G     L   +++  D+V    
Sbjct: 1   MSNGRVTQVMGPVIDVRFEHNEVPEINNALIIEVPKEDGTFELTLEVALQLGDDVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V + G+   +       GRV N LG  ID +D L        I  + P
Sbjct: 61  MDSTDGVQRGMEVQNTGKDISVPVGEVTLGRVFNVLGDTIDLEDKLDGSVRRDPIHRQSP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     
Sbjct: 121 NFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGIS 180

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +   +      +KK+ +V    +E P  R    L+A+T+AEYF  + 
Sbjct: 181 VFAGVGERTREGNDLYYEMRDSGVIKKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQ 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR  + A    
Sbjct: 299 SIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSRALEPAIVGQ 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +   + ++ E +DI  I G     +      V +   I  FL Q+
Sbjct: 359 EHYEVARDVQSTLQKYRELQDIIAILGMDELSEED-KLTVERARRIQFFLSQN 410


>gi|55056902|emb|CAF21952.1| ATP synthase beta subunit [Cedrus libani]
          Length = 462

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 41  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 100

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 101 EPVDNLGPVD-ARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 159

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 160 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIPESKVAL 219

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 220 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 279

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 280 AVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVL 337

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 338 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 397

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 398 LSEED-RLIVARARKIERFLSQP 419


>gi|94968677|ref|YP_590725.1| ATPase FliI/YscN [Candidatus Koribacter versatilis Ellin345]
 gi|94550727|gb|ABF40651.1| type III secretion system ATPase, FliI/YscN [Candidatus Koribacter
           versatilis Ellin345]
          Length = 437

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 154/416 (37%), Positives = 228/416 (54%), Gaps = 8/416 (1%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICP 74
             + +   G ++ +               LGD         D   G+++    + V    
Sbjct: 15  GASTLRWHGRVTKVVGNLIESEG--PLSSLGDSCEVISSKGDVYPGEIVGFRDNAVLSMT 72

Query: 75  VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + I  GD V        I+      GRV++A G P+DG     +   S  +    P
Sbjct: 73  LQPPKGIRFGDSVVGLAQPPSIAVGDEILGRVLDATGAPLDGITP-ARPRGSRPVDGSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               R  V +    GIR ID F     GQRIG+F GSG+GKSTL+ M  R    D  +++
Sbjct: 132 LPYARIPVREVMPCGIRAIDGFVTCGRGQRIGIFGGSGVGKSTLIGMLTRGSAADVTVLA 191

Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
           L+GERGREVREF+E+ +G+    ++VV+V+TSD+SP+LR  A + A  +AE+F+++G +V
Sbjct: 192 LIGERGREVREFVEESIGEEGMQRAVVIVSTSDQSPLLRLRAAMAATAVAEHFAAEGKHV 251

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL+LDS+TRF  + REI   +GE P A+GY  SVF+ L RL+ER G  E  +G+IT   +
Sbjct: 252 LLVLDSLTRFGMAQREIGLAAGEPPTAKGYTPSVFTLLARLVERAGNFE--RGSITGFYT 309

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           VL++GD+  DP+ D+VRS+LDGHIVL+R LA +G YPP+  L S+SRLA    S    + 
Sbjct: 310 VLMEGDDLQDPLVDAVRSLLDGHIVLDRKLASDGHYPPIQILESLSRLASAVCSVQHLQA 369

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
              L   +  +  + D+  IG Y+ G D +LD+AV  +P I   L Q   + +S +
Sbjct: 370 SRKLRAWLASYVRSEDLIRIGAYQRGGDPVLDQAVSAMPEIRKLLIQGALERTSLE 425


>gi|83952825|ref|ZP_00961555.1| ATP synthase subunit B [Roseovarius nubinhibens ISM]
 gi|83835960|gb|EAP75259.1| ATP synthase subunit B [Roseovarius nubinhibens ISM]
          Length = 474

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 186/417 (44%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +         + +V   +  + V    +   E + 
Sbjct: 6   GTITQVIGAVVDVQFGDHLPEILNALTTDNNGKKLVLEVAQHLGENTVRTIAMDSTEGLV 65

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V    G   +       GR++N +G+P+D    +   + +  I  + P    +   
Sbjct: 66  RGQEVTDTDGPITVPVGNATLGRILNVVGEPVDEGAPIKATE-TRAIHQEAPEFQEQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 SEVLVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N          +  +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVINPDNLEESQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKSGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           V +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D A    +
Sbjct: 303 VQAVYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPAIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|7706850|emb|CAB90046.1| ATP synthase beta subunit [Androcymbium ciliolatum]
          Length = 465

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIR--------INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I         +  + V    +   + ++ G  V   G    +       GR
Sbjct: 19  KGRDTVGQQINDTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 78

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 79  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 137

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 138 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIT 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 198 DSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 257

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 258 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 315

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 316 DATTVLSRGLAAKGIYPRVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 375

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 376 ILGLDELSEED-RLTVARARKIERFLSQP 403


>gi|4063550|gb|AAC98333.1| ATP synthase beta subunit [Helianthemum grandiflorum]
          Length = 456

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D LGQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 25  GQDTLGQEINVTCEVQQLLGNNRVRAVAMSATDGLMRGMAVIDTGAPLSVPVGGVTLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+ +D    +  G  +  I    P  +  +     F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGETVDSLGPVDTG-TTAPIHKPAPAFIQLETKLSIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +         + + VGER RE  +   +              
Sbjct: 144 LFGGAGVGKTVLIMELINNIAKSHGGVSVFAGVGERTREGNDLYMEMKESGVINEENLSK 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRIPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +       D   +    +   + R++E +DI  +
Sbjct: 322 ATTVLSRPLASKGIYPAVDPLDSKSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDIISV 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   +  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKVERFLSQP 408


>gi|5001585|gb|AAD37039.1|AF092113_1 ATP synthase beta subunit [Chloranthus oldhamii]
 gi|7708207|emb|CAB90044.1| ATP synthase beta subunit [Chloranthus japonicus]
          Length = 492

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E + I  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTSQRYKELQXIIAILGLDELSEED-RLTVSRARKIERFLSQP 428


>gi|85709193|ref|ZP_01040259.1| ATP synthase beta subunit [Erythrobacter sp. NAP1]
 gi|85690727|gb|EAQ30730.1| ATP synthase beta subunit [Erythrobacter sp. NAP1]
          Length = 485

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/433 (24%), Positives = 190/433 (43%), Gaps = 27/433 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G IS +      V    +   +   +  +      + +V   +  + V    +   E
Sbjct: 10  TTNGTISQVIGAVVDVQFPGELPAILTALETKNDGKTLVLEVAQHLGENTVRTIAMDATE 69

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G +  +       GR++N +G+ ID    +G  D++  I ++ P  +++
Sbjct: 70  GLVRGQEVINTGAQISVPVGPKTLGRIMNVVGEAIDERGPVG-ADMTSPIHAEAPAFVDQ 128

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 129 STEADILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGV 188

Query: 196 GERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           GER RE  +   ++L   +              K  +V    +E P  R    L+ +T+A
Sbjct: 189 GERTREGNDLYHEFLDAGVIAKDEDGNAISEGSKVALVFGQMNEPPGARARVALSGLTMA 248

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 249 EYFRDQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGNLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V ++ V  D+  DP   +  + LD    L+R+++E G YP VDPL S SR+ 
Sbjct: 307 TTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVL 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      +  +    +   + +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 367 EPRVVGQEHYETARRVQETLQKYKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 425

Query: 421 PSDLSSEDVFQEI 433
                  +VF  I
Sbjct: 426 ---FHVAEVFTNI 435


>gi|308746006|ref|YP_003934565.1| ATP synthase CF1 beta subunit [Cheilanthes lindheimeri]
 gi|302375439|gb|ADL29813.1| ATP synthase CF1 beta subunit [Cheilanthes lindheimeri]
          Length = 493

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/435 (25%), Positives = 188/435 (43%), Gaps = 29/435 (6%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           + L  + S+ +    GYI+ I      V     +   + + +V +G+NS   GQ I +  
Sbjct: 4   SSLLFEISELVEKNVGYITQIIGPVLDVAFSPGEMPNIYNSLVVKGRNSA--GQEINVTC 61

Query: 68  DI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
           ++        V        + +  G      G    +       GR+ N LG+P+D    
Sbjct: 62  EVQQLLGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGP 121

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+
Sbjct: 122 V-RNSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLI 180

Query: 179 SMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDES 227
                +       +S+ G   ER RE  +   +               K  +V    +E 
Sbjct: 181 MELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEP 240

Query: 228 PILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           P  R     TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++
Sbjct: 241 PGARMRVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL 300

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G
Sbjct: 301 GTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKG 358

Query: 347 RYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPL S S ++       +  +    +   + R++E +DI  I G     +     
Sbjct: 359 IYPAVDPLDSTSTMSQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RL 417

Query: 406 AVHQVPIIYDFLKQS 420
            V +   I  FL Q 
Sbjct: 418 TVARARKIERFLSQP 432


>gi|19033097|gb|AAL83533.1|AF408805_1 ATP synthase beta subunit [Chlorokybus atmophyticus]
          Length = 402

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAISMSGTDGLMRGMEVLDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPV-ANK 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  STLPIHRDPPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +  ++               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYQEMKESKVINEENLSESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSREMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|55056894|emb|CAF21948.1| ATP synthase beta subunit [Hesperocyparis arizonica]
          Length = 443

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           KN+D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 19  KNNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 78

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 79  IFNVLGEPVDNLGPVDALTTS-PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKI 137

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 138 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIS 197

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 198 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 257

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 258 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 315

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 316 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 375

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 376 ILGLDELSEDD-RLIVARARKIERFLSQP 403


>gi|123325669|gb|ABM74459.1| ATP synthase beta subunit [Fortunella polyandra]
          Length = 465

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|4206602|gb|AAD11732.1| ATP synthase beta subunit [Eremocitrus glauca]
          Length = 470

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 34  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 93

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 94  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 152

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 153 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLS 212

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 213 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 272

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 273 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 330

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 331 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 390

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 391 ILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|312867283|ref|ZP_07727493.1| ATP synthase F1, beta subunit [Streptococcus parasanguinis F0405]
 gi|322389187|ref|ZP_08062748.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 903]
 gi|311097412|gb|EFQ55646.1| ATP synthase F1, beta subunit [Streptococcus parasanguinis F0405]
 gi|321144092|gb|EFX39509.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis
           ATCC 903]
          Length = 468

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 118/415 (28%), Positives = 188/415 (45%), Gaps = 26/415 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD--------FVVHQG---KNSDNLGQVIRINLDIVYI 72
           G IS +      V        +GD         VV++    K+   L   + +   +V  
Sbjct: 4   GKISQVVGPVVDVAF-----SVGDKLPEINNALVVYKNDQQKSKVVLEVALELGDGVVRT 58

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   GR   +       GRV N LG  ID D    +      I  K
Sbjct: 59  IAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDQPFAEDAPRDSIHKK 118

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P        E+  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   
Sbjct: 119 APSFDELSTSEEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGG 178

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF  
Sbjct: 179 ISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRD 238

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+
Sbjct: 239 VEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGS 296

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           +T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR       
Sbjct: 297 VTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIV 356

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + S +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 357 GEEHYAVASEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQFFLSQN 410


>gi|63253135|dbj|BAD98325.1| beta subunit of ATP synthesis [Oleandra wallichii]
          Length = 464

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 190/433 (43%), Gaps = 25/433 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQV 62
           + L+ + S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V
Sbjct: 4   SSLSFEISELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEV 63

Query: 63  IRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            ++  +  V    +   + +  G      G    +       GR+ N LG+P+D    + 
Sbjct: 64  QQLLGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVR 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G  +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++ 
Sbjct: 124 SG-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITE 182

Query: 181 FARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPI 229
              +       +S+ G   ER RE  +   +               K  +V    +E P 
Sbjct: 183 SINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPG 242

Query: 230 LRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 243 ARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGT 302

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G Y
Sbjct: 303 EMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIY 360

Query: 349 PPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P VDPL S S +        +  +    +   + R++E +DI  I G     +      V
Sbjct: 361 PAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTV 419

Query: 408 HQVPIIYDFLKQS 420
            +   I  FL Q 
Sbjct: 420 ARARKIERFLSQP 432


>gi|17224741|gb|AAL37092.1| ATP synthase beta subunit [Dioscorea guerrerensis]
          Length = 483

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 70  MSATDGLMRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPGIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|302747630|gb|ADL63296.1| Atp1 [Saintpaulia magungensis]
          Length = 349

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|218135023|ref|ZP_03463827.1| hypothetical protein BACPEC_02928 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990408|gb|EEC56419.1| hypothetical protein BACPEC_02928 [Bacteroides pectinophilus ATCC
           43243]
          Length = 465

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  ++     V    S    + + +         + +V   I  + V    +   E +
Sbjct: 5   GKIVQVSGPVVDVEFEDSNLPSIKEALYVINNGHKCVMEVAQHIGHNTVRCIMLAASEGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   ++       GR+ N LG  IDG + L   +    I  + P   ++  
Sbjct: 65  SRDMTVVATGDSIQVPVGEKTLGRLFNVLGDTIDGGEKLDD-ETHWSIHREPPTFEDQSP 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         I + VGE
Sbjct: 124 VVEMLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATERGGYSIFTGVGE 183

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF   K  +VLL 
Sbjct: 184 RSREGNDLWTEMKESGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFRDVKHQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  ++   G++T+V +V V
Sbjct: 244 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLANDVGELQERIASTKD--GSVTSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +   +  
Sbjct: 302 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYNVAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D      V++   I  FL Q 
Sbjct: 362 RVQAILQKYKELQDIIAILGMEDLSDED-KTTVYRARKIQRFLSQP 406


>gi|78355397|ref|YP_386846.1| ATPase FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans
           str. G20]
 gi|78217802|gb|ABB37151.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 440

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 148/419 (35%), Positives = 229/419 (54%), Gaps = 9/419 (2%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74
           +   LV   G ++ I  +      +   +     ++ +  ++    +V+      +   P
Sbjct: 11  HDVQLVDTYGKVNKIVGLVAEGCGVKAPLGAVCHIIPEDGSAPLPAEVVGFRDGNILFMP 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSMEIMSK 131
            G    +  G L+ +              GR  +A G P+DG     +   +    I ++
Sbjct: 71  YGDMRGVQSGSLIRNTSMPPLFPVGESMLGRAFDAFGAPMDGSTMPPVAGHN---PIYAQ 127

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  ++R R++     G+R I+    L  GQR+G+ AGSG+GKSTL+ M AR    D  +
Sbjct: 128 PPNPLSRPRIDDPLDVGVRCINSLITLGKGQRVGIMAGSGVGKSTLMGMMARYTSADVNV 187

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I+L+GERGREV EF+ +D   + + +SV+++ATSD+SP++R  A   A  +AE+F  +G 
Sbjct: 188 IALIGERGREVVEFMEKDLGPEGMARSVLIIATSDQSPLVRMRAAYAATAVAEFFRDQGK 247

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TRFA + RE+    GE P  +GY  +VF++LP+LLER G +    G IT +
Sbjct: 248 DVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPTVFAQLPKLLERAGRNR--HGTITGI 305

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VRSILDGHIVL R LA+ G YP +D L S+SRL       +  
Sbjct: 306 YTVLVDGDDFNEPIADAVRSILDGHIVLTRDLADMGHYPAIDVLRSISRLRTDICPQEVI 365

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
               +LT  +  F +  D+  IG Y  G +  +D+A+  VP I  FL+Q   D  + D 
Sbjct: 366 AAGRTLTRHLATFRKVEDMINIGAYAQGSNPDIDQAIGMVPRINQFLQQQVQDKQAIDA 424


>gi|238750324|ref|ZP_04611826.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380]
 gi|238765107|ref|ZP_04626041.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638]
 gi|238696659|gb|EEP89442.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638]
 gi|238711557|gb|EEQ03773.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380]
          Length = 435

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGAAEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|238793102|ref|ZP_04636730.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909]
 gi|238727475|gb|EEQ19001.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909]
          Length = 435

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGTAEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|123325629|gb|ABM74439.1| ATP synthase beta subunit [Citrus limon]
 gi|123325651|gb|ABM74450.1| ATP synthase beta subunit [Citrus sinensis]
          Length = 463

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|229915399|gb|ACQ90744.1| CF1 beta subunit of ATP synthase [Oocystis solitaria]
          Length = 480

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + +V  GKN          +V ++  D  V    + 
Sbjct: 11  GRIIQIIGPVIDVAFPPGKMPSIYNALVVSGKNGASEEISVTCEVQQLLGDHCVRAVSMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P  
Sbjct: 71  ATDGLMRGMDVLDTGNPLTVPVGQATLGRIFNVLGEPVDNLGPV-ENKEAFPIHRSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 VDLDTKLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 WIVGEEHYECAQNVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|108796901|ref|YP_636199.1| CF1 beta subunit of ATP synthase [Pseudendoclonium akinetum]
 gi|118573722|sp|Q3ZJ68|ATPB_PSEAK RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|56159599|gb|AAV80623.1| CF1 beta subunit of ATP synthase [Pseudendoclonium akinetum]
          Length = 481

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 192/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V        Q   + + +V +G N    GQ + +  ++        V    
Sbjct: 12  GSITQIIGPVIDAAFAPGQLPNIYNALVIKGTNQA--GQEVAVTCEVQQLLGDHCVRAVA 69

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  +   G+   +       GR+ N LG+P+DG +++   + S+ I  K P
Sbjct: 70  MNATDGLMRGMNIVDTGKPLTVPVGKVTLGRIFNVLGEPVDGLEAVDSKE-SLPIHRKAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFVDLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +     +         K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVIQEKNMSASKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +E      ++   + R++E +DI  I G     +    K V +   I  FL Q 
Sbjct: 367 QPWIVGEEHYSCAQNVKETLQRYKELQDIIAILGLDELSEED-RKVVARARKIERFLSQP 425


>gi|66276267|gb|AAY44148.1| ATP synthase beta subunit [Coriaria ruscifolia]
          Length = 473

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 26  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAALSVPVGGATLGR 85

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P D    +     +  I    P  +        F+TG +V+D+  P   G +I
Sbjct: 86  IFNVLGEPXDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGXKVVDLLAPYRRGGKI 144

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +                 
Sbjct: 145 GLFGGAGVGKTVLIXELINNIAKAHGGVSVFGGVGERTREGNDLYMXMKESGVINEQNIA 204

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 205 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 264

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 265 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 322

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 323 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIA 382

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 383 ILGLDELSEED-RLTVARARKIERFLSQP 410


>gi|186684534|ref|YP_001867730.1| F0F1 ATP synthase subunit beta [Nostoc punctiforme PCC 73102]
 gi|226740655|sp|B2IUL2|ATPB_NOSP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|186466986|gb|ACC82787.1| ATP synthase F1, beta subunit [Nostoc punctiforme PCC 73102]
          Length = 482

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V      +  + + +   G N    GQ I I +++        V    
Sbjct: 11  GYITQIIGPVVDVKFPGGKLPQIYNALKIVGTNES--GQEINITVEVQQLLGDNQVRTVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+ N LG+P+D    +   + S+ I    P
Sbjct: 69  MSSTEGLVRGFEVTDTGAPITVPVGKATLGRIFNVLGEPVDNRGPVN-AEASLPIHRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              + +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +         
Sbjct: 128 KFTDLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 188 VFAGVGERTREGNDLYNEMIESGVINNENLNESKIALVYGQMNEPPGARMRVGLSGLTVA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S + 
Sbjct: 306 TTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTML 365

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 DE      ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 QPNIVGDEHYNTARAVQSTLQRYKELQDIIAILGLDELSEED-RLIVARARKVERFLSQP 424


>gi|123325681|gb|ABM74465.1| ATP synthase beta subunit [Merope angulata]
          Length = 466

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|7708300|emb|CAB90077.1| ATP synthase beta subunit [Escallonia sp. 'Chase 2499 K']
          Length = 470

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRV 105
             D  GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 31  GRDTGGQPINVTCEVQQLLGNNRVRAVAMSATDVLTRGMEVIDTGVLLSVPVGGATLGRI 90

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 91  FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 149

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 150 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIGE 209

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 210 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 269

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 270 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 327

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I
Sbjct: 328 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAI 387

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 388 LGLDELSEED-RLTVARARKIERFLSQP 414


>gi|123325715|gb|ABM74482.1| ATP synthase beta subunit [Pleiospermium latialatum]
          Length = 467

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|17224719|gb|AAL37081.1| ATP synthase beta subunit [Dioscorea elephantipes]
          Length = 479

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 38  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 97

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 98  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 156

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 157 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 216

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 217 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 276

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 277 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 334

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 335 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 394

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 395 ILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|4206588|gb|AAD11725.1| ATP synthase beta subunit [Atalantia ceylanica]
          Length = 472

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 186/419 (44%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPV 75
            G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    +
Sbjct: 6   SGHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAM 65

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P 
Sbjct: 66  SATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPA 124

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 125 FIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 184

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 185 FGGVGERTREGNDLYMEMKESGVINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAE 244

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 245 YFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TST 302

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 303 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 362

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 PRIVGEEHYESAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|17224715|gb|AAL37079.1| ATP synthase beta subunit [Dioscorea minima]
          Length = 469

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 2   GRIVQIIGPVLDVVFPPGKMPNIYNALVVKG--RDIAGQXINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGVGERTREGNDLYIEMKESGVINEKXIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPGIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|6017842|gb|AAF01655.1| ATP synthase beta subunit [Simmondsia chinensis]
          Length = 480

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPISVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S       P
Sbjct: 61  MSATDGLMRGMEVIDTGAPLNVPVGGATLGRIFNVLGEPVDNLGPVDTRXXS-PXHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFTQLDTKLSXFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSNEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|319412286|gb|ADV41823.1| ATP synthase F1 subunit alpha [Bigelowiella natans]
          Length = 532

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/427 (23%), Positives = 177/427 (41%), Gaps = 30/427 (7%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I S+     TV+ L +    G+ V+    +    G V+ +   +V +   G   E
Sbjct: 22  AHVGRILSVGDGVVTVSGLDR-ARSGEMVLFPNGDK---GMVLNLETSVVKVVLFGPERE 77

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMN 137
           ++ GD VF       I   A   GRV++++G PIDG+      + + E  +  K P  + 
Sbjct: 78  VTQGDYVFRTQSIVSIRTGAFLLGRVVDSVGNPIDGEPLSFSEEDTSEQLVDIKAPGIIV 137

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV------- 190
           RQ V +  +TGI+ ID   P+  GQR  +      GK+ +      +             
Sbjct: 138 RQSVFEPVQTGIKAIDAMIPIGRGQRELIIGDRQTGKTAIAVDAMINQSKTINSGPDAAE 197

Query: 191 -----IISLVGERGREVREFIEDYLGDN------LKKSVVVVATSDESPILRKMAPLTAV 239
                +   +G+R   V   +E            +  + VV ATS +S  L+ +AP T  
Sbjct: 198 KGLFSVYVAIGQRRSTVVNIVEALKEYGAEGSLAMDYTSVVAATSSDSAALQYLAPYTGC 257

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+ E+F   G + +   D +++ A + R+++      P    +P  VF    RLLER   
Sbjct: 258 TVGEWFRDNGMHAIATYDDLSKQAVAYRQMSLLLRRPPARDAFPGDVFYLHSRLLERAAK 317

Query: 300 SEKEKGNI--TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              + G+   TA   +     + +  +  +V SI DG I LN  L + G  P VD   SV
Sbjct: 318 LNPDNGSGSLTAFPVIETQAGDVSAFVPTNVISITDGQIFLNPDLFKAGIRPAVDVGISV 377

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+   A +   K++  SL   + ++ E +       +   +D +    + +   + + L
Sbjct: 378 SRVGSAAQAKGMKEVSGSLKLELAQYREAQ---AFEKFGSDLDPVTKFKLMRGVRLVEIL 434

Query: 418 KQSPSDL 424
           +Q   + 
Sbjct: 435 RQGQYEP 441


>gi|33327747|gb|AAQ09237.1| ATP synthase beta subunit [Euonymus alatus]
          Length = 490

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G   +   +V ++  +  V    +   E +  G  V   G    +       GR+ N LG
Sbjct: 49  GHTINVTCEVQQLLGNNQVRAVAMSATEGLMRGMDVIDTGAPLSVPVGVATLGRIFNVLG 108

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     S+ I    P  +  +     F+TGI+V+D+  P   G +IG+F G+
Sbjct: 109 EPVDNLGPVDTSTTSL-IHKSAPAFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 167

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 168 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVAL 227

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 228 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 287

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 288 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 345

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 346 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDE 405

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 406 LSEED-RLTVARARKIERFLSQP 427


>gi|25144756|ref|NP_498111.2| ATP synthase subunit family member (atp-2) [Caenorhabditis elegans]
 gi|21431750|sp|P46561|ATPB_CAEEL RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|17976515|gb|AAA19068.2| Atp synthase subunit protein 2 [Caenorhabditis elegans]
          Length = 538

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/413 (25%), Positives = 185/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I ++      V        + + +   G++   + +V   +  ++V    +   E 
Sbjct: 68  ASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEG 127

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G   +I       GR++N +G+PID    +   + +  I ++ P  +   
Sbjct: 128 LVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAA-IHAEAPEFVEMS 186

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 187 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 246

Query: 197 ERGREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +            K  +V    +E P  R    LT +T+AEYF  + 
Sbjct: 247 ERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQE 306

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT
Sbjct: 307 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSIT 364

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VL+R +AE   YP VDPL S SR+ D      
Sbjct: 365 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNVVGQ 424

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 425 NHYDIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 476


>gi|326332917|ref|ZP_08199174.1| ATP synthase F1, alpha subunit [Nocardioidaceae bacterium Broad-1]
 gi|325949275|gb|EGD41358.1| ATP synthase F1, alpha subunit [Nocardioidaceae bacterium Broad-1]
          Length = 546

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/439 (21%), Positives = 174/439 (39%), Gaps = 24/439 (5%)

Query: 6   ETLAQLAEDYSKNLVV--QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + LA+   DY        + G ++        V+ L       + +  +      LG  +
Sbjct: 13  DALAKYVADYKPEAAKTEEVGTVARTADGIAQVSGL-PSAMANELLEFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    + +  +G  ++I  G  V   G    +     + GRV++ LG  IDG   +   
Sbjct: 69  NLETREIGVVILGDFDKIEEGQSVRRTGEVLSVPVGDGYLGRVVDPLGNAIDGLGDIETV 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STL 177
                +  + P  M R+ V +   TGI+ ID  TP+  GQR  +      GK      T+
Sbjct: 129 -GRRALELQAPGVMQRKSVHEPLATGIKAIDAMTPIGRGQRQLIIGDRATGKTTVAIDTI 187

Query: 178 LSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           ++     D  D     + I   +G++G  +             + + +V A + +S   +
Sbjct: 188 INQKQNWDSGDPDKQVRCIYVAIGQKGSTIASVRGALEEAGALEYTTIVAAPASDSAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I +++  +G +VL++ D +T+ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQHWMYEGKHVLIVFDDLTKQAEAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      + G  ++T +  +    ++ +  I  +V SI DG I L   L    + P
Sbjct: 308 RLLERCAKLSDDMGAGSMTGLPIIETKANDVSAFIPTNVISITDGQIFLQSDLFAANQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            +D   SVSR+   A +   K +  SL   + ++   R +     +   +D    + + +
Sbjct: 368 AIDVGVSVSRVGGAAMTKALKAVTGSLKVDLAQY---RAMEAFAMFASDLDAASKQQLAR 424

Query: 410 VPIIYDFLKQSPSDLSSED 428
              +   LKQ        D
Sbjct: 425 GQRLMALLKQPAYSPYPID 443


>gi|154424883|emb|CAL18544.1| ATP synthase alpha subunit [Streptococcus thermophilus]
          Length = 367

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 156/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---VFGMAQNLESNDVGIIILGDFYTIREGDEVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + K   +  + +  P  M R+ V +  +TG++ +D   P+  G
Sbjct: 65  IGRVVNPLGQPIDGLGDI-KTTATRPVEAPAPGVMQRKSVSEPLQTGLKAVDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+   + ++  +       I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDVICIYVAIGQKESTVRTQVESLRKHGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKLSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|33318663|gb|AAQ05215.1| ATP synthase beta subunit [Dioon purpusii]
          Length = 475

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGQDTAGQEIHVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-ARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL------- 214
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +     +       
Sbjct: 150 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQDIS 209

Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 210 GSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L  RI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPSAVGYQPTLSTEMGSLQXRI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKXTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|17224709|gb|AAL37076.1| ATP synthase beta subunit [Dioscorea glabra]
          Length = 480

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 99  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 157

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 158 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 218 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 336 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 395

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 396 ILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|302747450|gb|ADL63206.1| Atp1 [Eremosyne pectinata]
          Length = 349

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|238783022|ref|ZP_04627049.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970]
 gi|238716023|gb|EEQ08008.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970]
          Length = 435

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGTAQKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|222084091|ref|YP_002519544.1| ATP synthase CF1 beta chain [Keteleeria davidiana]
 gi|220983643|dbj|BAH11409.1| ATP synthase CF1 beta chain [Keteleeria davidiana]
          Length = 487

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+     +  + + ++ +G+ +   GQ I++  ++        V    
Sbjct: 19  GRIAQIIGPVLDVSFPPGNMPYIYNSLIVKGQGTA--GQEIQVTCEVQQLLGNNKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDANEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDPL S S + 
Sbjct: 314 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 432


>gi|123325595|gb|ABM74422.1| ATP synthase beta subunit [Citropsis schweinfurthii]
          Length = 466

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|91226238|ref|ZP_01261078.1| F0F1 ATP synthase subunit beta [Vibrio alginolyticus 12G01]
 gi|91189249|gb|EAS75528.1| F0F1 ATP synthase subunit beta [Vibrio alginolyticus 12G01]
          Length = 467

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 183/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSDVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I    P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEVGAEEV-YSIHRSAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNEIALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYYEMQEAGVVNVEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D  ++   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQDHYEVARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|123325703|gb|ABM74476.1| ATP synthase beta subunit [Naringi crenulata]
          Length = 461

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|302747608|gb|ADL63285.1| Atp1 [Qualea sp. Chase 168]
          Length = 349

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLG-D 212
            +      GK+ +      +                 +   +G++   V + ++     D
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAD 177

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|157285293|gb|ABV31386.1| ATPase [Vibrio ordalii]
          Length = 419

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +      S      + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELP---SGRYALALNLERDSVGAVVMGPYADLKEGMKVIGSG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  LS  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGQPIDGKGPI-EAKLSSPVEMIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEEYVERFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    + ++    + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKRQLNHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|61196976|gb|AAX39473.1| ATP synthase beta subunit [Chlorokybus atmophyticus]
          Length = 402

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAISMSGTDGLMRGMEVLDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPV-ANK 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  STLPIHRDPPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +  ++               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYQEMKESKVINEENLSESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSREMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYDTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|123325699|gb|ABM74474.1| ATP synthase beta subunit [Monanthocitrus cornuta]
          Length = 461

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|119350519|gb|ABL63210.1| AtpB [Neochloris aquatica]
          Length = 393

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 165/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+ +D    +   + ++ I
Sbjct: 5   VRAVAMNPTDGLMRGMEVLDTGKPLSVPVGKATLGRIFNVLGEAVDNMGPVQNME-TLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGALQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +   +   S+   + R++E +DI  I G     +      V +   +  
Sbjct: 302 TSTMLQPWILGEKHYECAQSVKRTLQRYKELQDIIAILGLDELSEED-RLIVARARKVER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|23503631|dbj|BAC20412.1| ATP synthase beta-subunit [Gungnir neglectum]
          Length = 376

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + + + ++ I  +
Sbjct: 1   VSMQPTDGLMRGMEVVDTGKPLSVPVGRDTLGRIFNVLGEPVDNLGPV-QANSTLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLPDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYASAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|237688677|ref|YP_002905293.1| ATP synthase CF1 beta subunit [Pinus krempfii]
 gi|226951134|gb|ACO94197.1| ATP synthase CF1 beta subunit [Pinus krempfii]
          Length = 492

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 186/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V+    Y+  + + +  QG+ +   GQ I++  ++        V    
Sbjct: 19  GYIAQIIGPVLDVSFSPGYMPNIYNSLKVQGQGTA--GQEIQVTCEVQQLLGNHKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 77  MSATDGLTRGMTVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARITSPIHRTAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDPL S S + 
Sbjct: 314 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIERFLSQP 432


>gi|113910890|gb|ABI48177.1| ATPase beta subunit [Thamnobryum alleghaniense]
          Length = 472

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 182/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTSSPGKMPNIYNSLIVEGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPLSVPVGEATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V   ++E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQTNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP  S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPSDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|308189785|ref|YP_003922716.1| ATP synthase beta chain [Mycoplasma fermentans JER]
 gi|319777003|ref|YP_004136654.1| ATP synthase subunit beta [Mycoplasma fermentans M64]
 gi|238809784|dbj|BAH69574.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624527|gb|ADN68832.1| ATP synthase beta chain [Mycoplasma fermentans JER]
 gi|318038078|gb|ADV34277.1| ATP synthase subunit beta [Mycoplasma fermentans M64]
          Length = 502

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 122/421 (28%), Positives = 197/421 (46%), Gaps = 17/421 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRIN 66
            +L E  +KN V   G I  +      V     ++   L    V+       L     I 
Sbjct: 25  KKLTEKINKNNV---GKIIQVLGPVVDVKFNKGFLPSLLNALKVYSNDEVYTLEVAQHIG 81

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D V    +     ++ G  V   G    +       GR+ + LG+PID  ++  K  L 
Sbjct: 82  DDTVRTISMVSTNGLARGLDVIDTGAPISVPVGDKVLGRMFDVLGQPIDLQEA-PKAPL- 139

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           M I +  P    ++ V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 140 MPIHASAPSYEEQKTVSEVLETGIKVIDLLIPYAKGGKIGLFGGAGVGKTVLVQELINNI 199

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTI 241
             +     + + VGER RE  +   +     +  K+ +V    +E P  R    LT +T+
Sbjct: 200 ATEHGGLSVFAGVGERTREGNDLYHEMKAAGVLDKTALVFGQMNEPPGARMRVALTGLTM 259

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +
Sbjct: 260 AEYFRDKENQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--T 317

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+IT+V +V V  D+  DP   +  S LD   VL+R++A  G YP VDPL S SRL
Sbjct: 318 STRRGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVLDRNIAALGIYPAVDPLESNSRL 377

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +  ++   + +++ RF+E +DI  I G     +      V +   I +FL Q
Sbjct: 378 LDPLVVGQEHYEVAHGVVNILQRFKELQDIIAILGMGELSEED-KLLVARARRIRNFLSQ 436

Query: 420 S 420
            
Sbjct: 437 P 437


>gi|169826600|ref|YP_001696758.1| F0F1 ATP synthase subunit beta [Lysinibacillus sphaericus C3-41]
 gi|226740652|sp|B1HM56|ATPB_LYSSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|168991088|gb|ACA38628.1| ATP synthase subunit beta [Lysinibacillus sphaericus C3-41]
          Length = 471

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG+ ID  + + 
Sbjct: 49  ALHLGDDSVRTIAMSSTDGLQRGAEVTDSGKAISVPVGEVTLGRVFNVLGEVIDLGEEIP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADARRDSIHREAPTFEELSTTVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      +K++ +V    +E P  R    L
Sbjct: 169 LINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQTAMVFGQMNEPPGARMRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 289 RI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR        A+   + + +   I R+ E +DI  I G     D    + V +   I 
Sbjct: 347 STSRALSPEIVGAEHYAVATGVQRTIQRYRELQDIIAILGMDELSDED-KQTVERARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|189426219|ref|YP_001953396.1| F0F1 ATP synthase subunit beta [Geobacter lovleyi SZ]
 gi|226740205|sp|B3EA01|ATPB_GEOLS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|189422478|gb|ACD96876.1| ATP synthase F1, beta subunit [Geobacter lovleyi SZ]
          Length = 471

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/411 (26%), Positives = 191/411 (46%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTC-------LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           G IS +      V         +   + + +  +   +N+  L     +  + V    + 
Sbjct: 6   GKISQVIGAVIDVEFEPGKLPEIYHALRVTNPAIDDRENNLVLEVAQHLGENSVRTIAMD 65

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+           GR++N +G+P+D    +G  +    I  + P  
Sbjct: 66  STDGLKRGQAVIDTGKQICAPVGRKTLGRIMNVIGEPVDEMGPIG-NEKEYGIHREAPAF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 125 EDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGYSVF 184

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GD 250
           + VGER RE  +   +     +  K+ +V    +E P  R    LTA+++AEYF  +   
Sbjct: 185 AGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALTALSVAEYFRDEENQ 244

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V
Sbjct: 245 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTKKGSITSV 302

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      + 
Sbjct: 303 QAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEH 362

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  S+ +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 363 YAVARSVQYVLQKYKDLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 412


>gi|63253227|dbj|BAD98394.1| beta subunit of ATP synthesis [Davallia solida]
          Length = 464

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTCAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +    + V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RQTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|21633435|gb|AAM52192.1| ATP synthase beta subunit [Cordisepalum phalanthopetalum]
          Length = 484

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSD---NLGQVIRINLDI-VYICPVGIG 78
           G I  I      V      +  + + +V QG++++      +V ++  +  V    +   
Sbjct: 15  GRIVQIIGPVLDVAFPPGKMPYIYNALVVQGRDNEQTKVTCEVQQLLGNNRVRAVAMSDT 74

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LGKP+D    +   + +  I    P  + 
Sbjct: 75  DGLMRGLEVIDTGAPISVPVGGSTLGRIFNVLGKPVDHLGPVD-TNTTSPIHRSAPAXIQ 133

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 134 LDTKLSIFETGIKVXDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVXGG 193

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 194 VGERTREGNDLYMEMKESGVINEETIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 253

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 254 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 311

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 312 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 371

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 VGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|19033053|gb|AAL83511.1|AF408783_1 ATP synthase beta subunit [Lamprothamnium macropogon]
          Length = 402

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRAAPAFTQLDTQLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|7708169|emb|CAB90025.1| ATP synthase beta subunit [Bomarea hirtella]
          Length = 497

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ +      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 20  GRVAQLLGPVLEVRFPPGKMPNIYNAMVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 77

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++    V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 78  MSATDGLTRAMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 136

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 137 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 196

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 197 VFGGVGERTREGNDLYMEMKESGVINEKNITDSKVALVYGQMNEPPGARMRVGLTALTMA 256

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 257 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 314

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 315 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 374

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 375 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 433


>gi|20269414|gb|AAM17934.1| ATP synthase beta subunit [Polyspora axillaris]
          Length = 482

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V+    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIVQIIGPVLDVSFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    L A+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLAALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R +E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTLQRXKELQDIIAILGXDELSEKD-RLTVARARKIERFLSQP 434


>gi|62085156|gb|AAX62983.1| ATP synthase beta subunit [Leonia glycycarpa]
          Length = 434

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 169/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 2   NVTCEVQQLLGNNRVQTVAMSATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVD 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 62  DLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 120

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 121 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQ 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 181 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 240

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 241 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 298

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 299 AAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 358

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 359 D-RLTVARARKIERFLSQP 376


>gi|126661078|ref|ZP_01732160.1| F0F1-type ATP synthase, alpha subunit [Cyanothece sp. CCY0110]
 gi|126617622|gb|EAZ88409.1| F0F1-type ATP synthase, alpha subunit [Cyanothece sp. CCY0110]
          Length = 505

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 115/433 (26%), Positives = 193/433 (44%), Gaps = 15/433 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           ++  +  L +   +Y   +  Q  G + SI      V  L   V   + V   G   D L
Sbjct: 9   LENTITQLDKKLNNYQAKIQPQEIGILKSIDQGVAKVIGL-PNVKADELVRFPG---DIL 64

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118
           G    +++D + +  +G  E +  G  V   G+  +I       GR+++ LG+P+D   +
Sbjct: 65  GIAFNLDVDELGVILLGNSEHLEAGQEVKRTGKIVQIPVGEALLGRIVDGLGRPLDNKGT 124

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +        I  K PP ++R  V    +TG++V+D   P+  GQR  +     IGK+ + 
Sbjct: 125 IS-TQTQFPIERKAPPFIHRAPVTVPLQTGLKVVDALIPVGRGQRELIIGDRQIGKTAIA 183

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAP 235
             ++  + D     I   +G+R   V + IE     D L  S+VVVA  ++ P L+ + P
Sbjct: 184 VDTILNQKDKDVICIYCAIGQRTSAVAKVIEQLRQADALDYSIVVVADGEDPPGLQYITP 243

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A +I EYF  +G +VL++ D +TR A + RE++      P    YP  +F    RLLE
Sbjct: 244 YAATSIGEYFMERGRDVLIVYDDLTRHAWAYRELSLLLRRPPGREAYPGDIFYIHSRLLE 303

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +E   G++TA+  +     + +  I  ++ SI DG I L+  L ++G  PPV  
Sbjct: 304 RSTHLREEWGGGSLTALPIIETQAQSISAYIPTNLISITDGQIYLSPDLYQKGILPPVSV 363

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  K       ++   L     +F+E       G     +D    + + +   +
Sbjct: 364 GKSVSRVGGKTQLRAYGEVAGDLRLSYSQFQEVEVFARFG---TQLDEDTRQTLERGRRV 420

Query: 414 YDFLKQSPSDLSS 426
            + LKQ  S   S
Sbjct: 421 REILKQPQSQPFS 433


>gi|302747530|gb|ADL63246.1| Atp1 [Medicago sativa]
          Length = 349

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTSIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|123325601|gb|ABM74425.1| ATP synthase beta subunit [Citrus aurantiifolia]
          Length = 466

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 150 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLS 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 210 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|189017712|gb|ACD71525.1| F1-ATPase alpha subunit [Gymnosiphon aphyllus]
          Length = 356

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 86/356 (24%), Positives = 152/356 (42%), Gaps = 19/356 (5%)

Query: 81  ISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P  + R+
Sbjct: 1   IKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERK 59

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD----------- 188
            V +  +TG++ +D   P+  GQR  +      GK+ +      +               
Sbjct: 60  SVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETL 119

Query: 189 KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + EYF  
Sbjct: 120 YCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRD 179

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KG 305
            G + L+I D +++ A + R+++      P    +P  VF    RLLER      +   G
Sbjct: 180 NGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAG 239

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           ++TA+  +     + +  I  +V SI DG I L   L   G  P  +   SVSR+   A 
Sbjct: 240 SLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAYNVGLSVSRVGSAAQ 299

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
               K++  SL   + ++ E   +     +   +D      +++   + + LKQ  
Sbjct: 300 LRAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVLKQPQ 352


>gi|130076688|gb|ABO31964.1| ATPase alpha subunit [Exbucklandia longipetala]
          Length = 349

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 16/349 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 61  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 119

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 120 IDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 180 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V  I DG I     L  
Sbjct: 240 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFY 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            G  P ++   SVSR+   A     K++  S    + ++ E       G
Sbjct: 300 RGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYREVAAFAQFG 348


>gi|149390361|ref|YP_001294359.1| ATP synthase CF1 beta subunit [Dioscorea elephantipes]
 gi|190358667|sp|A6MML4|ATPB_DIOEL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|148668053|gb|ABR01437.1| ATP synthase CF1 beta subunit [Dioscorea elephantipes]
          Length = 496

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 54  GQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIAESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 293 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +     R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLTVARARKIERFLSQP 432


>gi|7708487|emb|CAB89931.1| ATP synthase beta subunit [Malpighia coccigera]
          Length = 470

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 167/389 (42%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 35  KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 94

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 95  IFNVLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 153

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 154 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 213

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K   V     E P  R     TA+ +AEY    K  +VLL + +I RF  +  E++  
Sbjct: 214 ESKVAXVYGQMXEPPGARXRVGXTALXMAEYXRDVKEQDVLLFIXNIFRFVQAGSEVSAL 273

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 274 LGRMPSAVGYQPTLSTEMXSLQERI--TXTKEGSITSIQAVYVPADDLTDPAPATTFAHL 331

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 332 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIA 391

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 392 ILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|296317258|ref|NP_001171729.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Saccoglossus kowalevskii]
          Length = 523

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/428 (25%), Positives = 193/428 (45%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGEEIS 82
           G + ++      V        + + +   G+    + +V +   + V     +   E + 
Sbjct: 57  GKVVAVIGAVVDVQFEDNLPPMLNALEVVGRQPRLVLEVAQHLGESVCRTIAMDGTEGLV 116

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G+ V   G   +I       GR+IN +G+PID    +   D    I  + P  +  +  
Sbjct: 117 RGNSVTDTGSPIKIPVGPETLGRIINVIGEPIDERGPI-PTDRRSGIHQEAPEFVEMKVE 175

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++  +TGI+V+D+  P C G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 176 QEILETGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 235

Query: 199 GREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +   +        K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 236 TREGNDLYHEMIESGVIDLKGDGSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 295

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 296 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 353

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      + 
Sbjct: 354 QAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNIVGNNH 413

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++   +  ++   +  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 414 YEIARGVQKILQDHKSLQDIIAILGMDELSEED-KLTVARARKIEKFLSQP---FQVAEV 469

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 470 FTGSPGKL 477


>gi|123325593|gb|ABM74421.1| ATP synthase beta subunit [Citropsis daweana]
 gi|123325717|gb|ABM74483.1| ATP synthase beta subunit [Swinglea glutinosa]
          Length = 466

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|167628982|ref|YP_001679481.1| ATP synthase f1, beta subunit [Heliobacterium modesticaldum Ice1]
 gi|254808154|sp|B0THN2|ATPB_HELMI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167591722|gb|ABZ83470.1| ATP synthase f1, beta subunit [Heliobacterium modesticaldum Ice1]
          Length = 471

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/363 (28%), Positives = 176/363 (48%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +   A   GR+ N LG PID    +   +
Sbjct: 56  LGNNAVRCVAMSSTDGLMRGMKALDTGAPISVPVGAEILGRMFNVLGDPIDEAGQVAAKE 115

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   I  K P   N +   +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     
Sbjct: 116 V-WPIHRKAPTFENLEPSTEVLETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIQELIN 174

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNLKKSV-VVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +   ++    + K+V +V    +E P  R    L+ +
Sbjct: 175 NIAMEYSGYSVFAGVGERTREGNDLYNEFKESGILKNVAMVFGQMNEPPGARMRVALSGL 234

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 235 VMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGQLQERI- 293

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S S
Sbjct: 294 -TSTKNGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRAIAELGIYPAVDPLDSTS 352

Query: 359 RLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D     DE   +   +  ++ R++E +DI  I G     +      V +   I  FL
Sbjct: 353 RILDPHVVGDEHYSVARGVQKILQRYKELQDIIAILGMDELSEDD-KIVVARARKIQRFL 411

Query: 418 KQS 420
            Q 
Sbjct: 412 SQP 414


>gi|113910954|gb|ABI48209.1| ATPase beta subunit [Cephalotaxus harringtonia]
          Length = 467

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/389 (28%), Positives = 174/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K++D  GQ IR+  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KDNDTTGQPIRVTCEVQQLLGNNKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGETTLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +G    S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDDLGPVGALTTS-PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIS 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      NVLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLIVSRARKIERFLSQP 408


>gi|241912910|gb|ACS72133.1| AtpB [Sauroglossum aurantiacum]
          Length = 489

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|238787862|ref|ZP_04631659.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641]
 gi|238724205|gb|EEQ15848.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641]
          Length = 435

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGTAEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVVNLEHPIEVPVGKSTLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|149798745|gb|ABR32063.1| ATP synthase beta chain [Radiovittaria gardneriana]
          Length = 426

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMSAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    
Sbjct: 60  TTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLITELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTNEKNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF       +L  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|319411542|emb|CBQ73586.1| probable ATP2-F1F0-ATPase complex, F1 beta subunit [Sporisorium
           reilianum]
          Length = 540

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 23/432 (5%)

Query: 22  QGGYISSITSVYYTV----TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           Q G + ++      V      L   +   +    QG     L     +  + +    +  
Sbjct: 70  QTGAVKTVIGPVVDVQFDTEQLPAILNALEVQDVQGGGRLVLEVAQHLGENTIRAIAMEG 129

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   +I       GR++N +G+P+D    + KG     I  + P  +
Sbjct: 130 TEGLVRGQKVVDTGLPIQIPVGPGTLGRIMNVIGEPMDERGPI-KGAKLAPIHVEPPAFV 188

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
           ++    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        S+  
Sbjct: 189 DQSTKAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFT 248

Query: 195 -VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            VGER RE  +   + +       +   K  +V    +E P  R    LT +TIAEYF  
Sbjct: 249 GVGERTREGNDLYHEMIETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRD 308

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL +D+I RF  +  E +   G +P A GY  ++ +++  + ERI  +  +KG+
Sbjct: 309 EEGQDVLLFIDNIFRFTQAGSETSALLGRIPSAVGYQPTLATDMGVMQERI--TTTKKGS 366

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D A  
Sbjct: 367 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPAIV 426

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   + +S   L+  ++  +DI  I G     +      V +   I  F+ Q     +
Sbjct: 427 GREHYDIATSTQKLLQDYKSLQDIIAILGMDELSEED-KLTVERARKIQRFMSQP---FA 482

Query: 426 SEDVFQEITKKL 437
              VF  I  KL
Sbjct: 483 VAQVFTGIEGKL 494


>gi|241912896|gb|ACS72126.1| AtpB [Pristiglottis montana]
          Length = 489

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQIHVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|77464910|ref|YP_354414.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77389328|gb|ABA80513.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 436

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 169/414 (40%), Positives = 244/414 (58%), Gaps = 2/414 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           LAE  + +L  + G ++ I     +V  L Q   LGD V   G      G+V+R++   V
Sbjct: 9   LAEIAAISLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  E +++GD V   G   I+P   W GR+++ LG+P+DG   L +G  +  + +
Sbjct: 69  TILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P A  R+ +     TG+ V D   PL  GQRIG+FAGSG+GKS+LL+ FARS   D V
Sbjct: 128 AAPQAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I LVGERGRE+REF E  LG   + ++VVV ATSD+SP++R+     A+ +AE+F  +G
Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+A   GE    RG+P S    +  L ER GP  +  G+ITA
Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V SVLV G +  +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR   +A S  E
Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASTAE 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L++    L+  ++    +   G Y  G D ++D A+   P +  FL +  SD
Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDASD 421


>gi|148887703|gb|ABR15428.1| ATP synthase beta subunit [Biebersteinia multifida]
          Length = 477

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 7   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 64

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 65  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 123

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 124 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 183

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 184 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 243

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 244 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 301

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 302 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 361

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 QPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDEXXEEDD-LTVARAXXIVRFLSQP 420


>gi|116333888|ref|YP_795415.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis ATCC 367]
 gi|122269425|sp|Q03QY8|ATPB_LACBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28193537|emb|CAD48596.1| F1F0-ATPase subunit beta [Lactobacillus brevis]
 gi|116099235|gb|ABJ64384.1| F0F1-type ATP synthase, beta subunit [Lactobacillus brevis ATCC
           367]
          Length = 471

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 115/386 (29%), Positives = 185/386 (47%), Gaps = 12/386 (3%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           + +   S  + +V + +   ++    +   + +  G  V + G    +       GRV N
Sbjct: 33  IKKDDGSVLVTEVALELGDGVMRTIAMDGTDGLRRGLEVENTGASISVPVGDDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG PIDG    G     M I    P         +  +TGI+VID+  P   G +IG+F
Sbjct: 93  VLGDPIDGGAEFGPDAERMPIHRDAPKYDELNPTTEILETGIKVIDLLEPYVRGGKIGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK-SVVVVAT 223
            G+G+GK+ L+     +       IS+   VGER RE  +   +  G  + K + +V   
Sbjct: 153 GGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYWEMKGSGVLKQTAMVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L R+L
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERAL 330

Query: 343 AEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S  LA +    +   + + +  ++ R+ E +DI  I G     D 
Sbjct: 331 TQQGIYPAVDPLASTSTALAPEIIGQEHYDVATEVQRVLQRYHELQDIISILGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSE 427
                V +   I  FL Q P  ++S+
Sbjct: 391 E-QTIVQRARRIQFFLSQ-PFSVASQ 414


>gi|904123|gb|AAA70374.1| adenosine triphosphatase [Lardizabala biternata]
          Length = 498

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDAVDQQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 81  ATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTXTXS-PIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|239815259|ref|YP_002944169.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
 gi|239801836|gb|ACS18903.1| ATPase, FliI/YscN family [Variovorax paradoxus S110]
          Length = 460

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 164/450 (36%), Positives = 239/450 (53%), Gaps = 25/450 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSD--------- 57
           A        +L  + G++  +      +  L     +G+    + +              
Sbjct: 6   ASRKALKETDLRRRIGWVREMQG--LAIDALGPDAAVGELCRIMVRSHGGPAEGGAAPAS 63

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116
            L +V+ +    V + P G  E I+ G  V   G   +I       GRVI+  G+P+DG 
Sbjct: 64  VLAEVVGLKPGRVTLMPYGPVEGIAAGCEVHALGADSQIGVGPAMLGRVIDGFGEPLDGL 123

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
                      + +     M R  + +  +TG+R ID    L  GQRIG+FAGSG+GKST
Sbjct: 124 PKPVAI-QRRPLKAAPINPMQRPPIRRILETGVRAIDGLLTLGQGQRIGIFAGSGVGKST 182

Query: 177 LLSMFARSDCFD--------KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDES 227
           LL + AR               +I+L+GERGREVREFIE  LG + L +SVVVVATSD+ 
Sbjct: 183 LLGLLARHVKAQGGADGSGGINVIALIGERGREVREFIEKQLGPEGLARSVVVVATSDQP 242

Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
            + R  A   A++IAEYF  +G NVLL +DSITRFA + RE+  ++GE P ARGY  SVF
Sbjct: 243 ALARLRAAYAALSIAEYFRDEGRNVLLTMDSITRFAMARREVGLSAGEPPTARGYTPSVF 302

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           +ELP L ER G +    G+ITA+++VLV+GD+ N+P++D++R+ILDGHIVL+R LA  G 
Sbjct: 303 AELPELCERCGMAPG-GGSITALLTVLVEGDDLNEPVSDALRAILDGHIVLSRQLAHRGH 361

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           YP +D L SVSRL  +     ++ L  +    +   E  R +  IG Y  G +  LD+A+
Sbjct: 362 YPAIDVLKSVSRLMPELADEAQRSLAVAAMQHLAVLERNRQMIDIGAYEKGANAELDRAI 421

Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              P +  +L+QS   +   +   ++   L
Sbjct: 422 DTEPGLQAWLRQSVGGVGRMEAIHDLRAIL 451


>gi|99082806|ref|YP_614960.1| ATP synthase FliI/YscN [Ruegeria sp. TM1040]
 gi|99039086|gb|ABF65698.1| flagellum-specific ATP synthase [Ruegeria sp. TM1040]
          Length = 442

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 169/440 (38%), Positives = 262/440 (59%), Gaps = 6/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M K+++ L+Q  E  +  L    G ++ I+     V+ L     +GD   + +GK  D  
Sbjct: 1   MMKSIQALSQ--ELANTRLAAPMGRVTGISGGEIEVSGLESQARIGDRLTLRRGKKDDLH 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+ I  D + + P    E  S+GD V  +     +P   W GRVI+  G+P+DG   L
Sbjct: 59  GEVLAIGSDHIRMLPDTAPERASIGDAVLLFQTPEFAPDDSWVGRVIDPFGEPLDGKPML 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G  S ++M   P A  R+ + K   TG+ +++   P+  GQRIG+FAGSG+GKSTL++
Sbjct: 119 -RGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQRIGLFAGSGVGKSTLMA 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+++ LG + +K++VVV ATSD+S ++R+     A
Sbjct: 178 QLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVVVAATSDQSALVRRRCAWAA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +++AE+F  +G NVL + DSITRFA + REIA  SGE P  RG+P SV   +  L ER G
Sbjct: 238 MSVAEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAPALRGFPPSVTPLITGLCERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P +D   SVS
Sbjct: 298 PGLEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A + +E +++ ++   +  +E++  +   G Y  G DL+LD+AV   P +  F  
Sbjct: 358 RSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAGLYSEGNDLVLDQAVKIWPELDSFFG 417

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           ++  D   +  F  +   L+
Sbjct: 418 RNELD-GIKGSFNRLALLLR 436


>gi|313673547|ref|YP_004051658.1| ATP synthase f1 subcomplex beta subunit [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940303|gb|ADR19495.1| ATP synthase F1 subcomplex beta subunit [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 468

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 181/411 (44%), Gaps = 15/411 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGK--NSDNLGQV-IRINLDIVYICPVG 76
              G I  +      +   S  +  + + V  + K   +  + +V   +  + V    + 
Sbjct: 2   TNVGKIVQVIGPVVDIKFDSGVLPEIYNAVKIENKATGTTVICEVEQHLGENTVRAVSMT 61

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+           GR++N +G P+D    +   D    I    P  
Sbjct: 62  STDGLVRGMEVIDTGKAITAPVGKGALGRILNVVGDPVDEKGPVDAVDY-WPIHRPAPKL 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++       +TGI+VID+  P   G + G+F G+G+GK+ L+     +         + 
Sbjct: 121 EDQDTGSNILETGIKVIDLLEPYTKGGKTGLFGGAGVGKTVLIMELINNIAKQHGGYSVF 180

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     +  K  +V    +E P  R    LT +TIAEYF      
Sbjct: 181 CGVGERTREGNDLYLEMKESGVLDKVALVYGQMNEPPGARMRVGLTGLTIAEYFRDVEGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKKGSITSV 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      + 
Sbjct: 299 QAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIVGVEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 YTVAREVQKILQRYKELQDIIAILGMEELTEED-KLIVARARKIQRFLSQP 408


>gi|238797873|ref|ZP_04641365.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969]
 gi|238718289|gb|EEQ10113.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969]
          Length = 447

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 17  LEVEGAAQKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIM 76

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P        +   +TGI+V+D+  P   G ++G+
Sbjct: 77  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKGGKVGL 135

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 136 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 195

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 196 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 255

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 256 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 313

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 314 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 373

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 374 D-KLVVSRARKIQRFLSQP 391


>gi|17224711|gb|AAL37077.1| ATP synthase beta subunit [Dioscorea japonica]
          Length = 481

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 99  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 157

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 158 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 218 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 336 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 395

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 396 ILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|241912916|gb|ACS72136.1| AtpB [Stenoptera ecuadorana]
          Length = 489

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   KN D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KNRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P     +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|157850694|gb|ABV90187.1| ATP synthase alpha chain [Enterococcus casseliflavus]
          Length = 367

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 153/375 (40%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  E I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESNDVGIIILGDFETIREGDKVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+PIDG   + + + S  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPIDGLGPI-ETNKSRPVEAAAPGVMQRKSVSEPMQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+T+      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTTIAIDAIINQKGQDMICIYVAIGQKDSTVRAQVETLRR 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A + +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVSAGASQPAPLLYIAPYAGAAMGEEFMYNGKHVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P V    SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLENDLFYSGVRPAVAAGLSVSRVGGSAQIKAMKKVAGTLCLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|332702727|ref|ZP_08422815.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay]
 gi|332552876|gb|EGJ49920.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay]
          Length = 467

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/413 (25%), Positives = 188/413 (45%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS----DNLGQV-IRINLDIVYICP 74
              G I  +      V     +   + + +  +  N+    + + +V   +  ++V    
Sbjct: 2   ANTGKIVQVIGAVVDVEFPEGKLPNILNALEIKNPNNQDAPELVCEVAQHLGDNVVRTIA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G      G    +       GR++N +G+P+D    +   D    I    P
Sbjct: 62  MDATEGLVRGMAAIDTGAPIAVPVGTASLGRIMNVVGRPVDELGPVAAKDF-WPIHRPAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         
Sbjct: 121 AFTEQSTKVEVLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGKS 180

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +   +     +  K+ ++    +E P  R    LTA+T+AEYF    
Sbjct: 181 VFAGVGERTREGNDLYHEMKDAGVLPKAALIYGQMNEPPGARARVALTALTVAEYFRDVD 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
            ++VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT
Sbjct: 241 GEDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTNKGSIT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S SR+ D      
Sbjct: 299 SVQAVYVPADDLTDPAPATTFAHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVLGV 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      ++  ++ ++++ +DI  I G     D      V +   I  FL Q 
Sbjct: 359 EHYGTARAVQQILQKYKDLQDIIAILGMDELSDED-KITVARARRIQRFLSQP 410


>gi|312882261|ref|ZP_07742007.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370105|gb|EFP97611.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 467

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/415 (26%), Positives = 181/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V + K    L    ++   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSSVPSVYDALNVTEAKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + S  I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEE-SYSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|89574029|gb|ABD77240.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Homo sapiens]
          Length = 445

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/407 (26%), Positives = 185/407 (45%), Gaps = 18/407 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDL 86
           ++      V        + + +  QG+ +  + +V   +    V    +   E +  G  
Sbjct: 1   AVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQK 60

Query: 87  VFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G   +I       GR++N +G+PID    + K      I ++ P  M     ++  
Sbjct: 61  VLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFMEMSVEQEIL 119

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202
            TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE 
Sbjct: 120 VTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 179

Query: 203 REFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
            +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 180 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 240 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   + 
Sbjct: 298 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 403


>gi|84500100|ref|ZP_00998366.1| ATP synthase subunit B [Oceanicola batsensis HTCC2597]
 gi|84392034|gb|EAQ04302.1| ATP synthase subunit B [Oceanicola batsensis HTCC2597]
          Length = 467

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 183/414 (44%), Gaps = 20/414 (4%)

Query: 27  SSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGD 85
           + +      V        + + +      +  + +V   +  + V    +   E +  G 
Sbjct: 2   TQVIGAVVDVQFDDHLPEILNALTTDNNGTKLVLEVAQHLGENTVRTIAMDATEGLVRGQ 61

Query: 86  LVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
            V    G   +       GR++N +G+P+D    + + D    I +  P   ++    + 
Sbjct: 62  EVTDTDGPISVPVGTATLGRILNVIGEPVDEKGPV-EADEFRPIHAPAPDFADQATEAEV 120

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
             TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE
Sbjct: 121 LVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGLSVFAGVGERTRE 180

Query: 202 VREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
             +   + +             K  +V    +E P  R    LT +T+AE F      +V
Sbjct: 181 GNDLYHEMIESGVLTPDNLPDSKIALVYGQMNEPPGARARIALTGLTLAEQFRDATGTDV 240

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT++ +
Sbjct: 241 LFFVDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQA 298

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SRL D      +  +
Sbjct: 299 VYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPQIVGEEHYQ 358

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
           +   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 359 VARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 410


>gi|288959333|ref|YP_003449674.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510]
 gi|288911641|dbj|BAI73130.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510]
          Length = 473

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/413 (25%), Positives = 185/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G I+ +T     V        + + +  Q      + +V   +    V    +   + 
Sbjct: 6   SVGKITQVTGAVVDVQFDGDLPAILNALHTQNDGKTLVLEVAQHLGESTVRTIAMDSTDG 65

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    +       GR+IN +G+PID   ++     S+ I  + P  +++ 
Sbjct: 66  LVRGAEVSDTGAPIAVPVGPETLGRIINVIGEPIDERGAVNAA-RSLPIHRQAPDFVDQS 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+VID+  P   G +IG+F G+G+GK+  +     +         + + VG
Sbjct: 125 TDAEVLITGIKVIDLLAPYAKGGKIGLFGGAGVGKTVTIMELINNVAKAHGGVSVFAGVG 184

Query: 197 ERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +   +        K  +V    +E P  R    L+ +T+AEYF  + 
Sbjct: 185 ERTREGNDLYHEMIESGVIKLDGPGSKVALVYGQMNEPPGARARVALSGLTLAEYFRDEE 244

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT
Sbjct: 245 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGALQERI--TSTKKGSIT 302

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VL+RS+AE   +P VDPL S SR+ D     D
Sbjct: 303 SVQAIYVPADDLTDPAPAASFAHLDATTVLSRSIAEMAIFPAVDPLDSTSRILDPRVVGD 362

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E   +  S+  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 363 EHYSVARSVQKVLQTYKSLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 414


>gi|123325573|gb|ABM74411.1| ATP synthase beta subunit [Aeglopsis chevalieri]
 gi|123325575|gb|ABM74412.1| ATP synthase beta subunit [Afraegle paniculata]
 gi|123325581|gb|ABM74415.1| ATP synthase beta subunit [Balsamocitrus dawei]
 gi|123325709|gb|ABM74479.1| ATP synthase beta subunit [Pamburus missionis]
 gi|123325723|gb|ABM74486.1| ATP synthase beta subunit [Triphasia trifolia]
          Length = 466

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|209559136|ref|YP_002285608.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes NZ131]
 gi|226740684|sp|B5XKQ1|ATPB_STRPZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|209540337|gb|ACI60913.1| ATP synthase beta chain [Streptococcus pyogenes NZ131]
          Length = 468

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 191/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + ++    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG+ ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF   +
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 SQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTQKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|14718058|gb|AAK72770.1| ATP synthase beta subunit [Freycinetia scandens]
          Length = 483

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIVQIIGPVLDVVFPPGKMPNINNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+             +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIXXXXXXXAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           ++G   ER R+  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VIGGVGERTRKGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L  +I  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQRKI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|118445003|ref|YP_878996.1| F0F1 ATP synthase subunit beta [Clostridium novyi NT]
 gi|171472992|sp|A0Q2Z4|ATPB_CLONN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118135459|gb|ABK62503.1| ATP synthase F1, beta subunit [Clostridium novyi NT]
          Length = 464

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 114/405 (28%), Positives = 189/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S  +  + + +     +   + +V   I  D+V    +   E +
Sbjct: 7   GRVVQVIGPVIDIKFDSDCLPNIYNAIEIDMGDRILITEVEQHIGDDVVRTIAMESTEGL 66

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   V       +   +   GR+ N LGK ID +    K +    I    P    +  
Sbjct: 67  KRGMKAVNTEKPISVPVGSEILGRLFNVLGKTIDEEGEF-KAEEYYPIHRPAPTFEEQSV 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 126 EPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G NVLL +
Sbjct: 186 RTREGNDLYYEMKESGVINKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQNVLLFI 245

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 246 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVP 303

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +   +  +
Sbjct: 304 ADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDVAIN 363

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + H++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 364 VKHILERYKELQDIIAILGVDELSEED-KLVVSRARKVQRFLSQP 407


>gi|7708288|emb|CAB90068.1| ATP synthase beta subunit [Euonymus alatus]
          Length = 484

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G   +   +V ++  +  V    +   E +  G  V   G    +       GR+ N LG
Sbjct: 49  GHTINVTCEVQQLLGNNQVRAVAMSATEGLMRGMDVIDTGAPLSVPVGVATLGRIFNVLG 108

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     S+ I    P  +  +     F+TGI+V+D+  P   G +IG+F G+
Sbjct: 109 EPVDNLGPVDTSTTSL-IHKSAPAFIQLETKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 167

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 168 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVAL 227

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 228 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 287

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 288 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 345

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 346 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDE 405

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 406 LSEED-RLTVARARKIERFLSQP 427


>gi|224830538|gb|ACN66364.1| ATP synthase beta chain [Hyperbaena ilicifolia]
          Length = 472

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL   S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDXTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|20384955|gb|AAM19144.1| ATP synthase beta subunit [Chara rusbyana]
          Length = 402

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTS- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQRTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|66276293|gb|AAY44161.1| ATP synthase beta subunit [Seyrigia humbertii]
          Length = 480

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 109/421 (25%), Positives = 184/421 (43%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
           V  G I+ I      V     +   + + ++ +G+++     +   +V ++  +  V   
Sbjct: 1   VHLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGKEINVTCEVQQLLGNNRVRAV 60

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V        +       GR+ N LG+PID    +     +  I    
Sbjct: 61  AMSATDGLMRGMEVVDTRAPLSVPVGGTTLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 120 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 179

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 180 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 239

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 240 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 297

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 298 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 357

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R +E +DI  I G     +     AV +   I  FL Q
Sbjct: 358 LQPRIVGEEHYETAQRVKQTLQRXKELQDIIAILGLDELSEED-RLAVARARKIERFLSQ 416

Query: 420 S 420
            
Sbjct: 417 P 417


>gi|55056900|emb|CAF21951.1| ATP synthase beta subunit [Abies alba]
          Length = 473

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+     +  + + ++ QG+ +   GQ I++  ++        V    
Sbjct: 21  GRIAQIIGPVLDVSFPPGNMPYIYNSLIVQGQGTT--GQEIQVTCEVQQLLGNHKVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDASTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    ++ P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQKISESKVALVYGQMNDPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EHFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPWIVGEEHYEIAQGVKQTLQRYKELQDIIAIPGLDELSEDD-RLIVARARKIERFLSQP 434


>gi|150187334|emb|CAK30230.1| ATP synthase alpha subunit [Streptococcus equinus]
          Length = 356

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 92/353 (26%), Positives = 151/353 (42%), Gaps = 10/353 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGD 116
             G    +  + V I  +G    I  GD V   G+   +       GRV+N LG+P+DG 
Sbjct: 8   TFGMAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGL 67

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + K   +  + +  P  M R+ V +  +TG++ ID   P+  GQR  +      GK++
Sbjct: 68  GDI-KTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTS 126

Query: 177 LLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
           +      +        I   +G++   VR  +E          ++VV A++ +   L  +
Sbjct: 127 VAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYI 186

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP   V +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RL
Sbjct: 187 APYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRL 246

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER          G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +
Sbjct: 247 LERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAI 306

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           D  +SVSR+   A     KK+  +L   +  + E         +   +D    
Sbjct: 307 DAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDAATQ 356


>gi|19033069|gb|AAL83519.1|AF408791_1 ATP synthase beta subunit [Coleochaete sieminskiana]
          Length = 402

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + I  G      G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGIMRGMEAIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDTTK 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  VS-PIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINSDNISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYDTAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|13447716|gb|AAK26715.1|AF200363_23 EscN [Escherichia coli]
 gi|18034520|gb|AAL57542.1|AF453441_26 EscN [Escherichia coli]
          Length = 446

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 155/409 (37%), Positives = 227/409 (55%), Gaps = 7/409 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G I++I               +G F  ++ + S  L +VI I+ D V++ P      
Sbjct: 33  RYEGKITNIGGTIIKARL--PKARIGAF--YKIEPSQRLAEVIAIDEDEVFLLPFEHISG 88

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  + + G  F+I       GR+++ +G+P+  + +         + ++ P  + RQ
Sbjct: 89  MYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNITAPYLPFERSLYAEPPDPLLRQ 148

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
            +++ F  G+R ID       GQRIG+FAGSG+GKSTLL M       D ++++L+GERG
Sbjct: 149 VIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERG 208

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV EF+       L K V+VV TSD   + R  A  TA TIAE+F  +G NVLL++DS+
Sbjct: 209 REVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAEFFRDQGKNVLLMMDSV 268

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR+A + R++   SGE  V  G+P SVFS LP+LLER GP+ K  G+ITA+ +VL++ DN
Sbjct: 269 TRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGPAPK--GSITAIYTVLLESDN 326

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            NDPI D VRSILDGHIVL R LAEE  +P +D   S SR+      ++  +  +    L
Sbjct: 327 VNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVKSEHLRAAAECKKL 386

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           I  ++    +  IG Y  G D   DKA+     I  F++QS  D+SS +
Sbjct: 387 IATYKNIELLIRIGEYTMGQDPGADKAIKNRKAIQSFIQQSTKDISSYE 435


>gi|78049323|ref|YP_365498.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|118573779|sp|Q3BP15|ATPB_XANC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78037753|emb|CAJ25498.1| ATP synthase beta chain [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 468

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 185/413 (44%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +G       Q  ++   +V    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFQRNEVPKVYDALKVEGTAITLEVQ-QQLGDGVVRTIALGSTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +    +  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++
Sbjct: 60  GLKRNLVATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRSAPSYEDQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 ASTTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGH 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 357 EHYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|134300981|ref|YP_001114477.1| F0F1 ATP synthase subunit beta [Desulfotomaculum reducens MI-1]
 gi|190358666|sp|A4J999|ATPB_DESRM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134053681|gb|ABO51652.1| ATP synthase F1 subcomplex beta subunit [Desulfotomaculum reducens
           MI-1]
          Length = 472

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/363 (27%), Positives = 178/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G+   +       GR++N LG+  DG + + K +
Sbjct: 54  LGNNRVRCIAMSSTEGLKRGMKVVSTGKAISVPVGRPVLGRLLNVLGEEADGLEPI-KAE 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  +++    +  +TGI+VID+  P   G +IG+F G+G+GK+ ++     
Sbjct: 113 KYYPIHRPAPALVDQSTKAEMLETGIKVIDLMIPFLKGGKIGLFGGAGVGKTVIVMELIN 172

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +   +     + +K+++V    +E P  R    LT +
Sbjct: 173 NIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLEKTIMVFGQMNEPPGARLRVGLTGL 232

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AE+F  +   + LL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 233 TMAEFFRDEEGADTLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 291

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG++T+V ++ V  D+  DP   +  + LD  +VL+R+++E G YP VDPL S S
Sbjct: 292 -TSTRKGSVTSVQAIYVPADDLTDPAPANAFAHLDATVVLSRAISELGIYPAVDPLDSTS 350

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  +    +  ++ R++E +DI  I G     D      V +   +  FL
Sbjct: 351 RILDPQVVGKEHYECARGVQSVLQRYKELQDIIAILGMDELSDED-KLTVARARKLQRFL 409

Query: 418 KQS 420
            Q 
Sbjct: 410 SQP 412


>gi|67924174|ref|ZP_00517617.1| ATP synthase F1, beta subunit [Crocosphaera watsonii WH 8501]
 gi|67853990|gb|EAM49306.1| ATP synthase F1, beta subunit [Crocosphaera watsonii WH 8501]
          Length = 483

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 192/421 (45%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKN--SDNL---GQVIRINLDI-VYIC 73
              G I+ I          S  +  + + +  +G+N   D +    +V ++  D  V   
Sbjct: 8   TSVGKITQIIGPVVDAEFPSGNLPRIYNALKVEGQNFAGDTVSVTCEVQQLLGDNQVRAV 67

Query: 74  PVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G D+V       +       GR+ N LG+P+D    +G  + S  I    
Sbjct: 68  AMSGTDGLVRGMDIVDSGSPISVPVGKATLGRIFNVLGEPVDEMGDVGNEETS-PIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P   + +   K F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +        
Sbjct: 127 PKLTDLETKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGV 186

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+
Sbjct: 187 SVFAGVGERTREGNDLYNEMIESKVINPENLSESKIALVYGQMNEPPGARMRVGLSGLTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +   D       ++   + R++E +DI  I G     +    + V +   I  FL Q
Sbjct: 365 LQPSVVGDEHYDTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|23503633|dbj|BAC20413.1| ATP synthase beta-subunit [Chlorogonium elongatum]
          Length = 376

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + + + ++ I  K
Sbjct: 1   VSMQQTDGLMRGMEVVDTGKPLSVPVGRDTLGRIFNVLGEPVDNLGPVQQ-NQTLPIHRK 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APLFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLPESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYATAQSVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|317153721|ref|YP_004121769.1| FliI/YscN family ATPase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943972|gb|ADU63023.1| ATPase, FliI/YscN family [Desulfovibrio aespoeensis Aspo-2]
          Length = 475

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 151/411 (36%), Positives = 223/411 (54%), Gaps = 8/411 (1%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
             G ++ +  +      +     LG    +   ++     +V+          P      
Sbjct: 18  TFGKVTKVVGLIAEGHGI--RAPLGSVCYLIPEESPPIAAEVVGFRDGACLFMPYSDMRG 75

Query: 81  ISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G+L+ +      +  +    GR ++  G P+DG   +   D  + +  + P  + R 
Sbjct: 76  IGPGNLIQNAATPPHMPVAKAMLGRALDCFGTPMDGKGPITP-DAFVPLHREPPNPLERP 134

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +    GIR ++    L  GQR+G+ AGSG+GKST L M AR    D  +I+LVGERG
Sbjct: 135 RINEPLDVGIRSVNALLTLGKGQRVGIMAGSGVGKSTTLGMMARYTKADINVIALVGERG 194

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV EF+  D   + + +SV+VVATSD+SP++R  A   A  +AEYF  +G +VLL++DS
Sbjct: 195 REVVEFMERDLGPEGMARSVLVVATSDKSPLIRMRAAYAATAVAEYFRDQGKDVLLMMDS 254

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+   +GE P   GY  SVF+ LP+LLER G S K  G+IT + +VLVDGD
Sbjct: 255 VTRFAMAGREVGLAAGEPPTRGGYTPSVFAHLPQLLERAGKSAK--GSITGIYTVLVDGD 312

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           +  +PIADS RSILDGHIVL R LA+ G YP +D L SVSRL     +   +    +L  
Sbjct: 313 DFTEPIADSTRSILDGHIVLTRELADLGHYPAIDVLRSVSRLRGDITTNQAQADGQALLR 372

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            +  F+   D+  IG Y+ G ++ +DKA+  V  I  FL+Q  ++    D 
Sbjct: 373 HMATFKRVEDMVNIGAYQKGANVEVDKAIAMVAPINGFLRQLVTEREPLDS 423


>gi|159045786|ref|YP_001534580.1| flagellum-specific ATP synthase [Dinoroseobacter shibae DFL 12]
 gi|157913546|gb|ABV94979.1| flagellum-specific ATP synthase [Dinoroseobacter shibae DFL 12]
          Length = 450

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 162/440 (36%), Positives = 248/440 (56%), Gaps = 6/440 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNL 59
           M  +  +LA   E    +     G++S+++     VT L+++  LGD VV  G    +  
Sbjct: 1   MTPDFSSLAAQIE--GASFHRISGHVSALSEAVVEVTGLNRHARLGDRVVLTGATGAEVG 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+ ++   + + P    E  +L D  +  GR  + PS  W G+VI+  G+  DG    
Sbjct: 59  GEVVTLSGSHIEVLPEARLEGFALRDRAYFQGRSEVRPSEDWIGKVIDPFGRCHDGTIP- 117

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G  +  +    P A+ R+ +    +TG  V + F PL  GQR+G+FAGSG+GKSTLL 
Sbjct: 118 APGPTAYPLRGTPPSAITRKPLGHRLETGTAVFNTFLPLVRGQRLGLFAGSGVGKSTLLG 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
              RS   D  +++L+GERGREVREF+      D +K+++VV ATSD++P+L++ A   A
Sbjct: 178 KLTRSVQADIAVVALIGERGREVREFVDRTLGADGMKRAIVVAATSDQAPLLKRRAAWLA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           ++IAEYF   G +VL + DS+TRFA + RE+A  +GE P  RG+P S    +  L ER G
Sbjct: 238 MSIAEYFRDLGGHVLFLTDSVTRFAEAHREVALTAGEAPSMRGFPPSTGQMIMDLAERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + KG+IT + SVLV G + ++P+AD +R +LDGH+VL+R +AE GR+P VD L SVS
Sbjct: 298 PGPEGKGDITGIFSVLVAGSDMDEPVADILRGVLDGHVVLSREIAERGRFPAVDVLQSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R    A SA E +L+      +  +E +R +   G Y  G D  +D A+     +  FL 
Sbjct: 358 RSLPDAASAAENELLQLARRTMGIYERSRLMIQSGLYTQGSDAEIDAAITAHRELEGFLA 417

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
                 ++ D F+ + + L+
Sbjct: 418 -RVETGTAADSFEHLAQALR 436


>gi|170516124|gb|ACB15072.1| ATPase alpha subunit [Microcachrys tetragona]
          Length = 363

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 82/365 (22%), Positives = 151/365 (41%), Gaps = 18/365 (4%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG-KGD 123
             + V I   G    I  GDLV   G    +       GRV++ALG PIDG  +L   G 
Sbjct: 1   ENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKALLGRVVDALGVPIDGKGALQVDGA 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               + +K P  + R+   +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 61  ERRRVEAKAPGIIERKSAHEPLQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIIL 120

Query: 184 SDCFDKV----------IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232
           +     +          +   +G++   V + ++     D L  +++  AT+ +   L+ 
Sbjct: 121 NQKRSHLRSGTSDSVYRVYVAIGQKRSTVAQLVQIIPEADALGYTIINAATASDPAPLQF 180

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
           +AP     + EYF     + ++I D +++ A + R+++      P    +P  VF    R
Sbjct: 181 LAPYPGCAMGEYFRDNKMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSR 240

Query: 293 LLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
           LLER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P 
Sbjct: 241 LLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIRLETELFYRGIRPA 300

Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           ++   SVSR+   A     K++  SL   + ++ E   +     +   +D       ++ 
Sbjct: 301 INVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQAPSNRG 357

Query: 411 PIIYD 415
             + +
Sbjct: 358 ARLTE 362


>gi|156972756|ref|YP_001443663.1| F0F1 ATP synthase subunit beta [Vibrio harveyi ATCC BAA-1116]
 gi|190358215|sp|A7N0Y1|ATPB1_VIBHB RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP
           synthase F1 sector subunit beta 1; AltName:
           Full=F-ATPase subunit beta 1
 gi|156524350|gb|ABU69436.1| hypothetical protein VIBHAR_00421 [Vibrio harveyi ATCC BAA-1116]
          Length = 467

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 182/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEV-YSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYYEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQDHYDTARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|89242548|gb|ABD64632.1| ATPase beta subunit [Najas gracillima]
          Length = 436

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ + +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 3   KGRDTLGQQMNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+ +D    +        I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGESVDNLGPVD-TRTRSPIHRSAPTFIELDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +D   
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKEHYETAQRVKETLQRYKELQDTIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|507390|gb|AAA81942.1| HrpJ4 [Pseudomonas syringae]
 gi|148562535|gb|ABQ88354.1| HrcN [Pseudomonas syringae pv. syringae]
          Length = 449

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 153/426 (35%), Positives = 222/426 (52%), Gaps = 15/426 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           V   G +S++  +     C      +GD   V +   S  L +++    +   +  +G  
Sbjct: 22  VRVIGRVSAVRRILL--ECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPP 79

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----- 132
           + I +G  +   G   RI       G V++  G+P+ G                      
Sbjct: 80  DGIQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGRLPRRVRRPRRPPHDSAGDRRR 139

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P A        G  TGIR ID    L  GQR+G+FAG+G GK+TL++  AR+   D ++ 
Sbjct: 140 PAADPATAHHPGLATGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVF 199

Query: 193 SLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
            L+GERGRE+REF+  +      ++SV+V ATSD S + R  A  TA  IAE F ++G  
Sbjct: 200 GLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQK 259

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL+LDS+TRFA + REI   SGE     G P SV++ LPRL+ER G SE   G+ITA+ 
Sbjct: 260 VLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALY 317

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371
           +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D  AS+SR+         ++
Sbjct: 318 TVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRKHQR 377

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
             + L  L+  +++   +  +G Y+ G D + D AV     I  FL+Q   DL      Q
Sbjct: 378 ANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQ 434

Query: 432 EITKKL 437
           E   +L
Sbjct: 435 ETLDRL 440


>gi|170040305|ref|XP_001847944.1| ATP synthase beta subunit [Culex quinquefasciatus]
 gi|167863871|gb|EDS27254.1| ATP synthase beta subunit [Culex quinquefasciatus]
          Length = 511

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 113/435 (25%), Positives = 196/435 (45%), Gaps = 28/435 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +  QG+ +  + +V   +  + V    +   E + 
Sbjct: 37  GKVVAVIGAVVDVQFDDNLPPILNALEVQGRQARLVLEVAQHLGENTVRTIAMDGTEGLV 96

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   RI   A   GR+IN +G+PID    + + +LS  I ++ P  +     
Sbjct: 97  RGQGVLDTGSPIRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFVEMSVE 155

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 156 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 215

Query: 199 GREVREFIEDYLGDNLKK--------------SVVVVATSDESPILRKMAPLTAVTIAEY 244
            RE  +   + +   +                  +V    +E P  R    LT +T+AEY
Sbjct: 216 TREGNDLYNEMIEGGVISLKDKTSKVVSIEALVALVYGQMNEPPGARARVALTGLTVAEY 275

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +
Sbjct: 276 FRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTK 333

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D 
Sbjct: 334 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDP 393

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q   
Sbjct: 394 NIIGAEHYNIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP-- 450

Query: 423 DLSSEDVFQEITKKL 437
                +VF     KL
Sbjct: 451 -FQVAEVFTGHAGKL 464


>gi|114509232|gb|ABI75184.1| ATPase alpha subunit [Syringodium filiforme]
 gi|312145160|gb|ADQ28323.1| ATPase subunit 1 [Syringodium isoetifolium]
          Length = 362

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 156/366 (42%), Gaps = 20/366 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGK-----------STLLSMFARSDCFDKVIISLVGERGREVR 203
             P+  GQR  +      GK             L +M    +     +   +G++   V 
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAMAKEENAKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYSILVAATASDPAPLQFLAPYSGCALGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|150187280|emb|CAK30215.1| ATP synthase alpha subunit [Streptococcus macacae NCTC 11558]
          Length = 367

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 152/368 (41%), Gaps = 13/368 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +    V I  +G    I  GD V   G+   +      
Sbjct: 5   AMSGELLEFSNG---VYGMAQNLESTDVGIIILGDFSGIREGDEVKRTGKIMEVPVGDAL 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N +G+P+DG   + +   +  + +  P  M RQ V +  +TG++ ID   P+  G
Sbjct: 62  IGRVVNPIGQPVDGLGDI-ETTATRPVEAPAPGVMQRQSVSEPLQTGLKAIDALVPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 121 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRAQVETLRKYGALDYTI 180

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 181 VVTASASQPSPLLFIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 240

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 241 REAYPGDVFYLHSRLLERSAKLSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 300

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L   L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 301 FLQEDLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 357

Query: 397 PGVDLILD 404
             +D    
Sbjct: 358 SDLDAATQ 365


>gi|113910926|gb|ABI48195.1| ATPase beta subunit [Anemia phyllitidis]
          Length = 419

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 172/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G++ +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 12  GQDINVTCEVQQLLGNNEVRAVAMSATDGLTRGMSVTDTGSPLSVPVGEITLGRIFNVLG 71

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 72  EPVDNLGPVDSS-ATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 130

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV----------- 219
           G+GK+  ++    +       +S+ G  G   RE  + Y+     K +            
Sbjct: 131 GVGKTVPITELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNVSESKVAL 190

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++ + G +P 
Sbjct: 191 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSASLGRMPS 250

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 251 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTSAHLDATTVL 308

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 309 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 368

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 369 SSEED-RLTVSRARKIERFLSQP 390


>gi|63253279|dbj|BAD98433.1| beta subunit of ATP synthesis [Scyphularia pentaphylla]
 gi|63253283|dbj|BAD98436.1| beta subunit of ATP synthesis [Scyphularia pycnocarpa]
          Length = 464

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAIDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +    + V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RQTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|123325673|gb|ABM74461.1| ATP synthase beta subunit [Glycosmis mauritiana]
          Length = 464

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|112791402|gb|ABI21971.1| ATP synthase beta subunit [Erwinia persicina]
          Length = 421

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G + V       +       GR++N LG+PID    +G+ +
Sbjct: 22  LGGGVVRTIAMGSSDGLKRGLETVDLKHPIEVPVGVATLGRIMNVLGEPIDMKGDIGEEE 81

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 82  -RWAIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 140

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 141 NIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 200

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 201 TMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 258

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 259 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 318

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +  L+ R++E +DI  I G     +      V +   +  FL 
Sbjct: 319 QLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLS 377

Query: 419 QS 420
           Q 
Sbjct: 378 QP 379


>gi|19033075|gb|AAL83522.1|AF408794_1 ATP synthase beta subunit [Onychonema sp. UTEX LB 832]
          Length = 402

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNRVRAVAMSATDGLTRGMEVLDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVNATT 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  TS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDNISDSKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGAEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|23503619|dbj|BAC20406.1| ATP synthase beta-subunit [Carteria crucifera]
          Length = 376

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 164/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I   
Sbjct: 1   VAMQPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGPVETQE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLGTEMGALQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|114509208|gb|ABI75172.1| ATPase alpha subunit [Lilaea scilloides]
          Length = 362

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 159/366 (43%), Gaps = 19/366 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNATAKENDKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V AT+ +   L+ ++P +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILESANALEYSILVAATASDPAPLQFLSPYSGCALGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|302747402|gb|ADL63182.1| Atp1 [Clethra barbinervis]
          Length = 349

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|119350459|gb|ABL63180.1| AtpB [Bulbochaete rectangularis var. hiloensis]
          Length = 392

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 164/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           +    +   E +  G  V   G    +       GR+ N LG+P+D    +   +  + I
Sbjct: 5   IRAVAMNPTEGLMRGMEVVDTGNPLLVPVGKDTLGRIFNVLGEPVDNMGPVNTEE-KLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTRLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYMEMKESKVIVEDNLGESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGCLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  S LD   VL+R LA +G YP VDPLAS
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRGLAAKGIYPAVDPLAS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D        +   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGDTHYNCAQKVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|179184247|gb|ACB78141.1| ATPase [Aliivibrio finisterrensis]
          Length = 416

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 92/407 (22%), Positives = 171/407 (42%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALAXTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFTAGVSPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ 399


>gi|150187314|emb|CAK30225.1| ATP synthase alpha subunit [Streptococcus agalactiae ATCC 13813]
 gi|154424903|emb|CAL18554.1| ATP synthase alpha subunit [Streptococcus agalactiae]
 gi|154424905|emb|CAL18555.1| ATP synthase alpha subunit [Streptococcus agalactiae]
          Length = 367

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G   EI  GD+V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AYGMAQNLESNDVGIIILGDFSEIREGDVVKRTGKIMEVPVGEAM 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   + +   +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGEI-ETTATRPVETPAPGVMQRKSVFEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     K++  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGAAQIKAMKRVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|123325713|gb|ABM74481.1| ATP synthase beta subunit [Paramignya scandens]
          Length = 466

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTGDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|20467411|gb|AAL27836.1| ATPase beta subunit [Cedrus libani]
          Length = 433

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/394 (26%), Positives = 176/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           ++ +G+ +   GQ I++  ++        V    +   + ++ G  V   G    +    
Sbjct: 12  LIVKGQGTA--GQEIQVTCEVQQLLXNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGG 69

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +    ++  I    P           F+TGI+V+D+  P  
Sbjct: 70  ATLGRIFNVLGEPVDNLGPVD-ARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 128

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 129 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 188

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 189 EQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 248

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 249 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 306

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             +  D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 307 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 366

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QDIIAIPGLDELSEED-RLIVARARKIERFLSQP 399


>gi|4206608|gb|AAD11735.1| ATP synthase beta subunit [Pleiospermium alatum]
          Length = 485

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 47  KGRDTVDQPINVACEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 107 IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 165

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 166 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNIS 225

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 226 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 286 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 344 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 403

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 404 ILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|83592562|ref|YP_426314.1| F0F1 ATP synthase subunit beta [Rhodospirillum rubrum ATCC 11170]
 gi|114564|sp|P05038|ATPB_RHORU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573735|sp|Q2RV18|ATPB_RHORT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|46368|emb|CAA26340.1| unnamed protein product [Rhodospirillum rubrum]
 gi|83575476|gb|ABC22027.1| ATP synthase F1, beta subunit [Rhodospirillum rubrum ATCC 11170]
          Length = 474

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/428 (25%), Positives = 183/428 (42%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +T     V    +   +   +      +  + +V   +   +V    +   E + 
Sbjct: 7   GTITQVTGAVVDVKFEGELPSILSALETDNHGNRLVLEVAQHLGESVVRTIAMDSTEGLV 66

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    +        I  + P    +   
Sbjct: 67  RGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTA-QRYPIHRQAPTFAEQATE 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 TEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELINNVAKGHGGYSVFAGVGER 185

Query: 199 GREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +         +  K  +V    +E P  R    L  +T AEYF  +   
Sbjct: 186 TREGNDLYHEMIDAGIIDLEGDKSKVALVYGQMNEPPGARARVALAGLTQAEYFRDEEGQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V
Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD    LNRS+AE G YP VDPL S SR  D      + 
Sbjct: 304 QAIYVPADDLTDPAPAASFAHLDATTTLNRSIAELGIYPAVDPLDSTSRALDPLVVGEEH 363

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            K+   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 364 YKVAREVQRVLQTYKSLQDIIAILGMDELSEED-RLVVARARKIQRFLSQP---FHVAEV 419

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 420 FTGSPGKL 427


>gi|282896620|ref|ZP_06304635.1| ATP synthase F1, beta subunit [Raphidiopsis brookii D9]
 gi|281198490|gb|EFA73376.1| ATP synthase F1, beta subunit [Raphidiopsis brookii D9]
          Length = 482

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ +      V      +  + + +  +G N    GQ I + +++        V    
Sbjct: 11  GYITQVIGPVVDVKYPGGKLPRIYNALTIKGTNEA--GQTINLTVEVQQLLGDNQVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +   + ++ I  + P
Sbjct: 69  MSTTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNQGPVN-NEETLPIHRESP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              + +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +         
Sbjct: 128 KLTDLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 188 VFAGVGERTREGNDLYNEMIESGVINKENLNESKIALVYGQMNEPPGARMRVGLSGLTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S + 
Sbjct: 306 TTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   +  S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPSIVGKEHYDIARSVQATLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 424


>gi|17224705|gb|AAL37074.1| ATP synthase beta subunit [Dioscorea decipiens]
          Length = 471

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 36  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 95

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 96  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 154

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 155 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 214

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 215 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 274

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 275 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 332

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 333 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 392

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 393 ILGLDELSEED-RLTVARARKIERFLSQP 420


>gi|2493028|sp|Q25117|ATPB_HEMPU RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|391913|dbj|BAA04178.1| H(+)-transporting ATPase beta subunit [Hemicentrotus pulcherrimus]
 gi|1094359|prf||2105433A H ATPase:SUBUNIT=beta
          Length = 523

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 115/440 (26%), Positives = 194/440 (44%), Gaps = 21/440 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIV 70
           A +   +     G I ++      V        + + +  QG+ S  + +V   +  + V
Sbjct: 44  AAEAKTSAAPVSGQIVAVIGAVVDVQFEDDLPPILNALEVQGRTSRLVLEVAQHLGENTV 103

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   E +  G      G    I       GR+IN +G+PID    +G  D    I 
Sbjct: 104 RTIAMDGTEGLIRGQKCVDTGSPISIPVGPETLGRIINVIGEPIDERGPIG-TDRRSAIH 162

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +     
Sbjct: 163 AEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 222

Query: 190 V---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAV 239
               + + VGER RE  +   + +        D+  K  +V    +E P  R    LT +
Sbjct: 223 GGYSVFAGVGERTREGNDLYHEMIEGGVISLKDDTSKVALVYGQMNEPPGARARVALTGL 282

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI 
Sbjct: 283 TVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI- 341

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S
Sbjct: 342 -TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSSS 400

Query: 359 RLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D     +    +   +  ++   +  +DI  I G     +      V +   I  FL
Sbjct: 401 RIMDPNVVGERHYSIARGVQKILQDNKTLQDIIAILGMDELSEDD-KLTVSRARKIQRFL 459

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q        +VF     KL
Sbjct: 460 SQP---FQVAEVFTGSPGKL 476


>gi|308238043|emb|CBK55612.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 424

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 11/387 (2%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPS 98
            Q   + + +V    N     Q  ++   +     +G  E +  G  V   G    +   
Sbjct: 4   GQVPEIMEAIVVDANNLTIEVQA-QLGDGVARGIAMGPSEGLKRGLAVTRTGAPISVPVG 62

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR++N LG+P+DG   +   D    I    P         +  +TGI+VID+  P 
Sbjct: 63  HATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +     + 
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      +   +  S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G     +      V +   I  +L Q 
Sbjct: 360 GMDELSEDD-KLLVSRARKIQRYLSQP 385


>gi|251782142|ref|YP_002996444.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390771|dbj|BAH81230.1| ATP synthase beta chain [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 468

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 190/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + ++    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG+ ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTQKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|150187295|emb|CAK30219.1| ATP synthase alpha subunit [Streptococcus urinalis 2285-97]
          Length = 367

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 154/368 (41%), Gaps = 13/368 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 7   AMSGELLEFSNG---AFGMAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 63

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 64  IGRVVNPLGQPVDGLGEIKTTGFR-PVETPAPGVMERKSVSEPLQTGLKAIDALVPIGRG 122

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E       L  ++
Sbjct: 123 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKFGALDYTI 182

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 183 VVTASASQPSPLLFIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 242

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 243 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 302

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 303 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 359

Query: 397 PGVDLILD 404
             +D    
Sbjct: 360 SDLDAATQ 367


>gi|269962672|ref|ZP_06177017.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
 gi|269832595|gb|EEZ86709.1| ATP synthase subunit B [Vibrio harveyi 1DA3]
          Length = 467

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 182/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEV-YSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQDHYDTARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|150187220|emb|CAK30199.1| ATP synthase alpha subunit [Streptococcus agalactiae]
          Length = 367

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 13/368 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G   EI  GD+V   G+   +      
Sbjct: 6   AMSGELLEFSNG---AYGMAQNLESNDVGIIILGDFSEIREGDVVKRTGKIMEVPVGEAM 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   + +   +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 63  IGRVVNPLGQPVDGLGEI-ETTATRPVETPAPGVMQRKSVFEPLQTGLKAIDALVPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 122 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 181

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A + +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 182 VVTAPASQPSPLLFIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 241

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  +F    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 242 REAYPGDIFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 301

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     K++  +L   +  + E         + 
Sbjct: 302 FLQENLFNSGIRPAIDAGSSVSRVGGAAQIKAMKRVAGTLRLDLASYRELE---AFTQFG 358

Query: 397 PGVDLILD 404
             +D    
Sbjct: 359 SDLDAATQ 366


>gi|37720999|gb|AAN32502.1| ATP synthase beta subunit [Amerorchis rotundifolia]
          Length = 497

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + ++   K+ D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVIFPPGKMPNIYNALII--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +E       +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYGTAQMVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|17224723|gb|AAL37083.1| ATP synthase beta subunit [Dioscorea hispida]
          Length = 480

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 37  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTGAPLSVPVGGATLGR 96

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 97  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 155

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 156 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 215

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 216 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 275

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 276 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 333

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 334 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 393

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 394 ILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|221078811|gb|ACL99480.1| ATP synthase beta subunit [Maba tropophylla]
          Length = 465

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQSINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G           +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEAIDTRAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|145503262|ref|XP_001437608.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404759|emb|CAK70211.1| unnamed protein product [Paramecium tetraurelia]
          Length = 499

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 192/433 (44%), Gaps = 18/433 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M+       + AE   K      G I+ +      V        + + +  QG +   + 
Sbjct: 10  MRLGFSAAKKQAET-GKAATATTGQIAQVIGAVVDVQFDGPLPPILNALQVQGTSHKLIL 68

Query: 61  QVIRINLD-IVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDS 118
           +V +   D  V    +   E +  G  V    G   I       GR++N +G PID    
Sbjct: 69  EVAQHLGDSRVRTIAMDSTEGLIRGQPVSDLGGPITIPVGPETLGRIMNVIGDPIDERGP 128

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +  +   I  + P  +++    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+
Sbjct: 129 I-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGGKIGLFGGAGVGKTVLI 187

Query: 179 SMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL------KKSVVVVATSDESPI 229
                +         + + VGER RE  +   + +   +       +  ++    +E P 
Sbjct: 188 QELINNVAKAHGGYSVFAGVGERTREGNDLYHEMVASGVINLSGGSRCALIYGQMNEPPG 247

Query: 230 LRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 248 ARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSALLGRIPSAVGYQPTLAT 307

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           +L +L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R+L E G Y
Sbjct: 308 DLGQLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRALTELGIY 365

Query: 349 PPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P VDPL S SR+ D     +    +   +  L+  ++  +DI  I G     +      V
Sbjct: 366 PAVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQDYKSLQDIIAILGMDELSEDD-KLTV 424

Query: 408 HQVPIIYDFLKQS 420
            +   +  FL Q 
Sbjct: 425 ARARKVQRFLSQP 437


>gi|112791394|gb|ABI21967.1| ATP synthase beta subunit [Pantoea ananatis]
          Length = 426

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 13/366 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V    +  ++       GR++N LG+PID    L + D
Sbjct: 22  LGGGVVRTIAMGTSDGLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLTEED 81

Query: 124 LSM----EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            S      I    P   ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  + 
Sbjct: 82  GSAVEVSSIHRPAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 141

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
              R+   +     + + VGER RE  +F  +    N + K  +V    +E P  R    
Sbjct: 142 ELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVA 201

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L E
Sbjct: 202 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 261

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT+V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL 
Sbjct: 262 RI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLD 319

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR  D      +   +   +  L+ R++E +DI  I G     +      V +   I 
Sbjct: 320 STSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDIIAILGMDELSEED-KLLVARARKIQ 378

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 379 RFLSQP 384


>gi|19745847|ref|NP_606983.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS8232]
 gi|50913944|ref|YP_059916.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10394]
 gi|94990145|ref|YP_598245.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10270]
 gi|94994061|ref|YP_602159.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10750]
 gi|81822768|sp|Q5XCY0|ATPB_STRP6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81847967|sp|Q8P1K5|ATPB_STRP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573763|sp|Q1JHN5|ATPB_STRPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573764|sp|Q1J7F9|ATPB_STRPF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|19747995|gb|AAL97482.1| putative proton-translocating ATPase, beta subunit [Streptococcus
           pyogenes MGAS8232]
 gi|50903018|gb|AAT86733.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10394]
 gi|94543653|gb|ABF33701.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10270]
 gi|94547569|gb|ABF37615.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10750]
          Length = 468

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 190/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + ++    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG+ ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTQKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|318042250|ref|ZP_07974206.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CB0101]
          Length = 486

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 187/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I  +      V   +  +  + + +   GKNS         +V ++  D  V    + 
Sbjct: 11  GIIRQVIGPVIDVEFPAGKLPKIYNALRVTGKNSAGQDVALTAEVQQLLGDHRVRAVAMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +     +  I  + P  
Sbjct: 71  STDGLVRGMEAMDTGASISVPVGEATLGRIFNVLGEPVDEQGPVSTT-TTAPIHREAPKL 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            + +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +     + 
Sbjct: 130 TDLETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 189

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 190 AGVGERTREGNDLYEEFKESGVINPDDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 250 FRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTL 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   D   +   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 AVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIEKFLSQP 424


>gi|283853224|ref|ZP_06370476.1| ATP synthase F1, beta subunit [Desulfovibrio sp. FW1012B]
 gi|283571397|gb|EFC19405.1| ATP synthase F1, beta subunit [Desulfovibrio sp. FW1012B]
          Length = 470

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 190/411 (46%), Gaps = 19/411 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQ--VIR----INLDIVYICPVG 76
           G I  +      V     +   + + +  +  N +   +  V+     +  ++V    + 
Sbjct: 9   GKIVQVIGAVLDVEFPEGKLPSILNALEIKNTN-NIYAEDLVVEVAQHLGDNVVRCIAMD 67

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G   R+       GR++N +G+P+D    +    +   I    P  
Sbjct: 68  STDGLVRGMPATDTGSPIRVPVGKAALGRILNVVGRPVDEMGPVDAAAM-WPIHRPAPAF 126

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           +++    +  +TGI+VID+  P   G ++G+F G+G+GK+ +L     +         + 
Sbjct: 127 VDQSTSIELLETGIKVIDLLIPFPKGGKMGLFGGAGVGKTVVLMELINNIAKHHGGLSVF 186

Query: 193 SLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   ++   D L K+ +V    +E P  R    LTA+T AEYF  +   
Sbjct: 187 AGVGERTREGNDLYNEFKEADILGKASLVYGQMNEPPGARARVALTALTCAEYFRDEEGQ 246

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+V
Sbjct: 247 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTKKGSITSV 304

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADE 369
            +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D      D 
Sbjct: 305 QAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPLVLGGDH 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   + ++++ +DI  I G     D      V +   I  FL Q 
Sbjct: 365 YATAREVQMSLQKYKDLQDIIAILGMDELSDED-KLIVARARKIQRFLSQP 414


>gi|126653441|ref|ZP_01725537.1| F0F1 ATP synthase subunit beta [Bacillus sp. B14905]
 gi|126589797|gb|EAZ83930.1| F0F1 ATP synthase subunit beta [Bacillus sp. B14905]
          Length = 471

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V   G+   +       GRV N LG+ ID  + + 
Sbjct: 49  ALHLGDDSVRTIAMSSTDGLQRGAEVTDSGKAISVPVGEVTLGRVFNVLGEVIDLGEEIP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 ADARRDSIHREAPTFEELSTTVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      +K++ +V    +E P  R    L
Sbjct: 169 LINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQTAMVFGQMNEPPGARMRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 TGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 289 RI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR        A+   + + +   I R+ E +DI  I G     D    + V +   I 
Sbjct: 347 STSRALSPEIVGAEHYAIATGVQRTIQRYRELQDIIAILGMDELSDED-KQTVERARRIQ 405

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 406 FFLSQN 411


>gi|332163550|ref|YP_004300127.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318608057|emb|CBY29555.1| ATP synthase beta chain [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325667780|gb|ADZ44424.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 435

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGAAEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P   +    +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|222152834|ref|YP_002562011.1| F0F1 ATP synthase subunit beta [Streptococcus uberis 0140J]
 gi|254808167|sp|B9DRT6|ATPB_STRU0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|222113647|emb|CAR41560.1| ATP synthase beta chain [Streptococcus uberis 0140J]
          Length = 468

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG+ ID D+   
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLDEPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 ADAAREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTNKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLA 345

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++ + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALSPEIVGQEHYEVATEVQRVLQRYRELQDIIAILGMDELSDDE-KVLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|229542495|ref|ZP_04431555.1| ATP synthase F1, beta subunit [Bacillus coagulans 36D1]
 gi|229326915|gb|EEN92590.1| ATP synthase F1, beta subunit [Bacillus coagulans 36D1]
          Length = 473

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 167/366 (45%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + I  G  V   G    +       GRV N LG+ ID D  L 
Sbjct: 51  ALHLGDDAVRTIAMASTDGIRRGMEVVDTGAPISVPVGEATLGRVFNVLGEVIDLDGELK 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 GNVRRDPIQKPAPSFEQLSTQVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LINNVAQEHGGISVFAGVGERTREGNDLYYEMKDSGVIAKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTNKGSITSIQAIYVPADDYTDPAPATTFAHLDATTNLERRLSEMGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   +   +   + R+ E +DI  I G     +      V +   I 
Sbjct: 349 STSRALSPEIVGEEHYNVARQVQQTLQRYRELQDIIAILGMDELSEDD-KMIVARARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|119221374|gb|ABL61892.1| ATP synthase beta-subunit [Cylindrocapsa geminella]
          Length = 395

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 5   VRAVAMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNLGPVETQE-TLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               PP ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRTAPPFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    ++ P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNDPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+ EYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMGEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V PL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALASKGIYPAVSPLES 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       S+  ++ R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYDCARSVQSILQRYKELQDIIAILGLDELSEED-RLVVSRARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|308238031|emb|CBK55606.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 419

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 11/387 (2%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPS 98
            Q   + + +V    N     Q  ++   +     +G  E +  G  V   G    +   
Sbjct: 4   GQVPEIMEAIVVDANNLTIEVQA-QLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVG 62

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR++N LG+P+DG   +   D    I    P         +  +TGI+VID+  P 
Sbjct: 63  HATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +     + 
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      +   +  S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G     +      V +   I  +L Q 
Sbjct: 360 GMDELSEDD-KLLVSRARKIQRYLSQP 385


>gi|123325691|gb|ABM74470.1| ATP synthase beta subunit [Microcitrus inodora]
          Length = 460

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 25  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLS 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|313903636|ref|ZP_07837026.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466189|gb|EFR61713.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 469

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   + +  G   V   G   +       GR+ N LG+PIDG +   +  
Sbjct: 54  LGNNVVRCVAMASTDGLQRGMPAVDTGGPISVPVGREVLGRMFNVLGEPIDGKEP-PQAK 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   +     +  +TGI+VID+  P   G ++G+F G+G+GK+ ++     
Sbjct: 113 KRYPIHRPAPDVADVNPATEILETGIKVIDLICPFARGGKVGLFGGAGVGKTVIIMELIH 172

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +  +      + + VGER RE  +   +     +  K+ +V    +E P  R    LT +
Sbjct: 173 NIAYKHGGFSVFAGVGERTREGNDLYHELKESGVLDKTALVFGQMNEPPGARLRVGLTGL 232

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +AEYF  +   ++LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 233 AMAEYFRDEEGQDLLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERI- 291

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG+IT+V +V V  D++ DP   +  + LD  + L R++AE G YP VDPLAS S
Sbjct: 292 -TTTRKGSITSVQAVYVPADDYTDPAPVTTFAHLDSTVRLERAIAERGIYPAVDPLASTS 350

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   +  ++ R+++ +DI  I G     +      V +   +  FL
Sbjct: 351 RILDPNIVGQEHYEVARGVQQVLQRYKDLQDIIAILGMDELTEED-KLIVQRARKLERFL 409

Query: 418 KQS 420
            Q 
Sbjct: 410 SQP 412


>gi|157888989|dbj|BAF80943.1| beta subunit of ATP synthesis [Humata heterophylla]
          Length = 464

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|109947169|ref|YP_664397.1| F0F1 ATP synthase subunit beta [Helicobacter acinonychis str.
           Sheeba]
 gi|123362703|sp|Q17Y78|ATPB_HELAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|109714390|emb|CAJ99398.1| ATP synthase F1 sector beta subunit [Helicobacter acinonychis str.
           Sheeba]
          Length = 466

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 187/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV----VHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I  +      V   S    + + +       G     + +V   +  + V    + + 
Sbjct: 3   GKIIQVLGPVVDVEFESYLPAIFEALDINFEVNGVQKSLVLEVAAHLGGNRVRAIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +    +V   G+   +       GR+ N +G+ ID  + L    +   I  K P    
Sbjct: 63  EGLVRNQVVKARGKMIEVPVGEGVLGRIFNVVGESIDNLEPLKPSLI-WPIHRKAPSFEQ 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYFEMKEGGVLDKVALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++  E+ +L ERI     + G+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRIPSAVGYQPTLAGEMGKLQERIA--STKNGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+       +   +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYE 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + + +  ++ ++++ +DI  I G     +    K V +   I  FL Q 
Sbjct: 360 IATGIQQVLQKYKDLQDIIAILGLDELSEED-KKIVERARKIEKFLSQP 407


>gi|37543305|gb|AAL92717.1| ATP synthase beta subunit [Coleochaete scutata]
          Length = 402

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVDAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|20467401|gb|AAL27831.1| ATPase beta subunit [Thuja plicata]
          Length = 448

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K++D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 17  KDNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVDALTKS-PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 136 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEDD-RLIVARARKIERFLSQP 401


>gi|5758874|gb|AAD50848.1| ATP synthase beta subunit [Cyperus albostriatus]
          Length = 487

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 47  KGRDTVGQQINVTCEVQQLLGNSLVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 107 IFNVLGEPIDNLGPVDISTTS-PIHRSAPAFIELDTRLSIFETGIKVVDLLAPYRRGGKI 165

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 166 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKTLS 225

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 226 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  +KG IT++ +V V  D+  DP   +  + L
Sbjct: 286 LGRMPSAVGYQPTLSTEMGSLQERI--TSTQKGAITSIQAVYVPADDLTDPAPATTFAHL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP V PL S S +        +  +   ++     R++E +DI  
Sbjct: 344 DATTVLSRPLAAKGIYPAVSPLDSTSTMLQPNIVGEEHYQTAQNVKQTSQRYKELQDIIA 403

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 404 ILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|184186105|ref|NP_001116974.1| ATP synthase beta subunit [Strongylocentrotus purpuratus]
 gi|115966189|ref|XP_001177551.1| PREDICTED: similar to H(+)-transporting ATPase beta subunit
           [Strongylocentrotus purpuratus]
          Length = 523

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 115/440 (26%), Positives = 194/440 (44%), Gaps = 21/440 (4%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIV 70
           A +   +     G I ++      V        + + +  QG+ S  + +V   +  + V
Sbjct: 44  AAEAKTSASPVSGQIVAVIGAVVDVQFEDDLPPILNALEVQGRTSRLVLEVAQHLGENTV 103

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   E +  G      G    I       GR+IN +G+PID    +G  D    I 
Sbjct: 104 RTIAMDGTEGLIRGQKCVDTGSPISIPVGPETLGRIINVIGEPIDERGPIG-TDKRSAIH 162

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +     
Sbjct: 163 AEAPAFVEMSVNQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 222

Query: 190 V---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAV 239
               + + VGER RE  +   + +        D+  K  +V    +E P  R    LT +
Sbjct: 223 GGYSVFAGVGERTREGNDLYHEMIEGGVISLKDDTSKVALVYGQMNEPPGARARVALTGL 282

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI 
Sbjct: 283 TVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI- 341

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S
Sbjct: 342 -TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSSS 400

Query: 359 RLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D     +    +   +  ++   +  +DI  I G     +      V +   I  FL
Sbjct: 401 RIMDPNVVGERHYGIARGVQKILQDNKTLQDIIAILGMDELSEDD-KLTVSRARKIQRFL 459

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q        +VF     KL
Sbjct: 460 SQP---FQVAEVFTGSPGKL 476


>gi|305671663|gb|ADM63141.1| ATP synthase beta subunit [Cardiopteris sp. van der Werff et al.
           17270]
          Length = 443

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 171/384 (44%), Gaps = 26/384 (6%)

Query: 59  LGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINAL 109
           +GQ I +  ++        V    +   + +  G  V   G    +       GR+ N L
Sbjct: 1   VGQPINVTCEVQQLLGNSRVRAVAMSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVL 60

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G
Sbjct: 61  GEPVDNLGPVD-TRATSPIHRCAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGG 119

Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSV 218
           +G+GK+ L+     +       +S+ G   ER RE  +   +               K  
Sbjct: 120 AGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVA 179

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P
Sbjct: 180 LVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMP 239

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   V
Sbjct: 240 SAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTV 297

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I G  
Sbjct: 298 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLD 357

Query: 397 PGVDLILDKAVHQVPIIYDFLKQS 420
              +      V +   I  FL Q 
Sbjct: 358 ELSEED-RLTVARARKIERFLSQP 380


>gi|254499110|ref|ZP_05111800.1| flagellar protein export ATPase FliI [Legionella drancourtii
           LLAP12]
 gi|254351649|gb|EET10494.1| flagellar protein export ATPase FliI [Legionella drancourtii
           LLAP12]
          Length = 430

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 153/415 (36%), Positives = 236/415 (56%), Gaps = 8/415 (1%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77
           + + G I     +            +G+      +N   +   +VI      VY+ P   
Sbjct: 11  IERLGEIEQFVGLKLVANGP-PQTFIGEVCDILDQNQQTVMQAEVIGFEQGKVYLMPYDS 69

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + + +G  V   G    I+      G V++A  +PID    L      +    K+ P +
Sbjct: 70  VQ-VCMGYKVRATGNHLSIAVGEALLGHVVDAFAQPIDEQIKLTYTQRVLTKNKKINP-L 127

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            R  + +   TGI+ ID   PL  GQRIG+FAGSG+GKSTLL    ++   +  +I+L+G
Sbjct: 128 TRMPINERLTTGIQAIDSLLPLGKGQRIGIFAGSGVGKSTLLGTMVQNLQSEINVIALIG 187

Query: 197 ERGREVREF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREV +F +       LKKSV+VV+ SDES ++R+ A  TA  IAEYF  +   V+L 
Sbjct: 188 ERGREVNDFIVNHLDEATLKKSVLVVSCSDESALMRRQAVYTATAIAEYFCQQSKQVMLF 247

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +DSITRFA + REI+ + GE P ARGY  SVF+ LP ++ER G  +++ G+I+A+ +VLV
Sbjct: 248 MDSITRFAMAQREISLSLGEPPTARGYTPSVFALLPGIIERTGNFKEQ-GSISALYTVLV 306

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +GD+ N+P+AD +R++LDGHIVL R LA+ G YP +  L SVSRLA    + +E++L++ 
Sbjct: 307 EGDDFNEPLADHMRALLDGHIVLTRELAQRGHYPAISILQSVSRLAKHIVAPEEQQLINQ 366

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           +   +  +++ +D+  +G Y+PG + +LD+AV ++P I   L Q  +   S D  
Sbjct: 367 IIATLSLYQQNKDLIEVGAYKPGNNALLDEAVERLPAINQLLIQDKNHFLSFDEL 421


>gi|218441980|ref|YP_002380309.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 7424]
 gi|226740185|sp|B7KGV4|ATPB_CYAP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218174708|gb|ACK73441.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7424]
          Length = 482

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/418 (26%), Positives = 190/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ +          S  +  + + +  +G N      +   +V ++  D  V    + 
Sbjct: 10  GKITQVIGPVVDAEFPSGKLPRIYNALTVKGTNPAGAEVNITCEVQQLLGDNQVRAVAMS 69

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  +   G    +       GR+ N LG+P+D   S+   + +  I    P  
Sbjct: 70  STDGLVRGMEIIDTGAPISVPVGKSTLGRIFNVLGEPVDEKGSVNVNE-TFPIHRPAPKL 128

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            + +   K F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +S+ 
Sbjct: 129 TDLETKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVF 188

Query: 196 G---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   + +             K  +V    +E P  R    L+A+T+AEY
Sbjct: 189 GGVGERTREGNDLYNEMIESKVINPDNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEY 248

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 249 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTK 306

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +   
Sbjct: 307 EGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQP 366

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  K   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 367 NIVGQEHYKTARAVQSTLQRYKELQDIIAILGLDELSEED-RQTVDRARKIERFLSQP 423


>gi|112791358|gb|ABI21949.1| ATP synthase beta subunit [Yersinia enterocolitica]
          Length = 421

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  +G     + +V + +   +V    +G  + +S G  V +      +       GR++
Sbjct: 5   LEVEGAAEKLVLEVQQQLGGGVVRCIAMGSSDGLSRGLKVINLEHPIEVPVGKSTLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG PID    +G+ +    I  + P   +    +   +TGI+V+D+  P   G ++G+
Sbjct: 65  NVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N+  K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSED 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|89574027|gb|ABD77239.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Tadarida brasiliensis]
          Length = 429

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 106/407 (26%), Positives = 186/407 (45%), Gaps = 18/407 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDL 86
           ++      V        + + +  QG+++  + +V   +    V    +   E +  G  
Sbjct: 1   AVIGAVVDVQFDEGLPPILNALEVQGRDTRLVLEVAQHLGESTVRTIAMDGTEGLVRGQK 60

Query: 87  VFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G   +I       GR++N +G+PID    + K      I ++ P  +     ++  
Sbjct: 61  VLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEMSVEQEIL 119

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202
            TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE 
Sbjct: 120 VTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 179

Query: 203 REFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
            +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 180 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 240 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   + 
Sbjct: 298 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 403


>gi|297538197|ref|YP_003673966.1| flagellar protein export ATPase FliI [Methylotenera sp. 301]
 gi|297257544|gb|ADI29389.1| flagellar protein export ATPase FliI [Methylotenera sp. 301]
          Length = 510

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 156/438 (35%), Positives = 232/438 (52%), Gaps = 27/438 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I+ +T +      +   + +G    V   +      +V+  + + + + P    + + 
Sbjct: 71  GRITKLTGLVMEAAGI--KLPIGSACYVPLAEGRRVEAEVVGFDGERMLLMPQSSVDGVM 128

Query: 83  LGDLVFH--------------------WGRFR-ISPSACWCGRVINALGKPIDGDDSLGK 121
            G  VF                       R R +       GRV++  G P+D    +  
Sbjct: 129 PGAKVFALEVAEALPKPHHGNPPRRRVTDRARHLPVGNELLGRVVDGAGNPLDDLGKIVA 188

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              S  + ++    + R  +E+    G+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 189 A-QSSPLNARPMNPLMRAPIEEILDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVLLGMM 247

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D +++ L+GERGREV+EFIE  LG   L +SVVV A +D   ++R      A T
Sbjct: 248 ARYTTADVIVVGLIGERGREVQEFIEQILGPVGLARSVVVAAPADAPALMRLQGANYATT 307

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F  +G NVLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G  
Sbjct: 308 IAENFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNG 367

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           ++ +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP +D   S+SR 
Sbjct: 368 KRGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAIDVEQSISRA 427

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S + +KL   L  L  R+  + D+  +G Y  G D +LD+A+ +   I  FL+Q 
Sbjct: 428 MHNITSPEHQKLARKLKQLNSRYMRSVDLINVGAYEAGSDAVLDQAIARHDKIDAFLQQG 487

Query: 421 PSDLS-SEDVFQEITKKL 437
            S+ S  E+    +   L
Sbjct: 488 ISERSGVEESIGHLAHVL 505


>gi|4519350|dbj|BAA75590.1| ATP synthase beta-subunit [Chlorogonium kasakii]
          Length = 376

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR++N LG+P+D    + K + S+ I  +
Sbjct: 1   VAMQPTDGLMRGMEVVDSGKPLTVPVGKDTLGRILNVLGEPVDNLGPV-KANSSLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+DI  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDILAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLPDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYATAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|294501860|ref|YP_003565560.1| ATP synthase F1 subunit beta [Bacillus megaterium QM B1551]
 gi|295707208|ref|YP_003600283.1| ATP synthase F1 subunit beta [Bacillus megaterium DSM 319]
 gi|302393677|sp|P12698|ATPB_BACMQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|294351797|gb|ADE72126.1| ATP synthase F1, beta subunit [Bacillus megaterium QM B1551]
 gi|294804867|gb|ADF41933.1| ATP synthase F1, beta subunit [Bacillus megaterium DSM 319]
          Length = 473

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            I +  + V    +   + +  G  V   G    +       GRV N LG+ ID D  + 
Sbjct: 51  AIHLGDNTVRTVAMSSTDGLVRGLEVEDTGAAISVPVGDVTLGRVFNVLGEKIDLDAPID 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G     I  + P   N     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 AGARRDPIHRQAPKFENLSTQAEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARQRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   +   +   + R++E +DI  I G     D      V +   + 
Sbjct: 349 STSRALSPEIVGEEHYAIARQVQQTLQRYKELQDIIAILGMDELSDED-KLVVQRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|149190474|ref|ZP_01868745.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
 gi|148835728|gb|EDL52694.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1]
          Length = 467

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 184/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSDVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + S  I  + P    
Sbjct: 61  DGLRRGVTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-SYAIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNEVALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYEVARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|63091837|emb|CAH58769.1| ATP synthase alpha chain [Lactococcus lactis subsp. lactis]
          Length = 367

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 156/369 (42%), Gaps = 13/369 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSA 99
           +    G+ V         LG    ++   V I  +G    I  GD V   G+   I    
Sbjct: 6   ENAMSGELVEFSNG---VLGMAQNLDATDVGIIVLGDFLSIREGDTVKRTGKIMEIQVGE 62

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+N LG+P+DG   L  G  +  + +K P  M R+ V +  +TG++ ID   P+ 
Sbjct: 63  ELIGRVVNPLGQPVDGLGELNTGK-TRPVEAKAPGVMQRKSVSEPLQTGLKAIDALVPIG 121

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKK 216
            GQR  +      GK+++      +        I   +G++   VR  +E       +  
Sbjct: 122 RGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKLGAMDY 181

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A++ +   L  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 182 TIVVTASASQPSPLLYIAPYAGAAMGEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRP 241

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER      +   G++TA+  +     + +  IA +V SI DG
Sbjct: 242 PGREAYPGDVFYLHSRLLERAAKLSDDLGGGSMTALPFIETQAGDISAYIATNVISITDG 301

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L   L   G  P +D  +SVSR+   A     KK+  +L   +  F E         
Sbjct: 302 QIFLENDLFYSGVRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRLDLASFRELE---AFTQ 358

Query: 395 YRPGVDLIL 403
           +   +D   
Sbjct: 359 FGSDLDEAT 367


>gi|19033081|gb|AAL83525.1|AF408797_1 ATP synthase beta subunit [Spirogyra maxima]
          Length = 402

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEVVDTGAALSVPVGEVTLGRIFNVLGEPVDNLGPVDAV- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              EI    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TKFEIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGPEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLVVARA 357

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 358 RKVERFLSQP 367


>gi|58424949|gb|AAW73986.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 512

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 45  MSQGKIVQIIGAVVDVEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDG 104

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 105 LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQS 163

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 164 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 223

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD----- 250
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 224 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKG 283

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 284 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 341

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 342 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 401

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 402 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 452


>gi|302035755|ref|YP_003796077.1| ATP synthase F1 subunit beta [Candidatus Nitrospira defluvii]
 gi|300603819|emb|CBK40151.1| ATP synthase F1, beta subunit [Candidatus Nitrospira defluvii]
          Length = 480

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 174/370 (47%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+IN LG+P+D    + K  
Sbjct: 55  LGENRVRGIAMSTTDGLTRGMDVQDTGAPISVPVGRETLGRLINVLGEPVDEKGPI-KAK 113

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P   ++    +  +TGI+V+D+  P   G ++G+F G+G+GK+ ++     
Sbjct: 114 KTYPIHRPAPRLEDQDTKTEVLETGIKVVDLLEPYSKGGKVGLFGGAGVGKTVIIMELIN 173

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   +               K+ +V    +E P  R 
Sbjct: 174 NIALHHGGFSVFAGVGERTREGNDLWHEMQESKVIDPDDHTKSKAALVYGQMNEPPGARL 233

Query: 233 MAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LT + +AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 234 RVALTGLAVAEFFRDEENQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPNLSTEMG 293

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R LAE G YP V
Sbjct: 294 ALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQLAELGIYPAV 351

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S SR+ D      +  K+   +  ++ R+++ +DI  I G     +     AV + 
Sbjct: 352 DPLDSTSRILDPQVIGEEHYKVARGVQSVLQRYKDLQDIIAILGMDELSEDD-KMAVARA 410

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 411 RKIQRFLSQP 420


>gi|299066538|emb|CBJ37728.1| Flagellum-specific ATP synthase [Ralstonia solanacearum CMR15]
          Length = 472

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 165/458 (36%), Positives = 248/458 (54%), Gaps = 32/458 (6%)

Query: 8   LAQLA-EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-------------- 52
           L QL  E     L  + G ++ ++ +          V +G+                   
Sbjct: 6   LRQLRSELRDAELTRRIGTVARLSGLAIVAQG--PNVQVGELCAILPSGRQASADHAASN 63

Query: 53  -----------GKNSD-NLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSA 99
                      G N+D  L +V+ I+   + + P G  + ++ G+ V    GR       
Sbjct: 64  VAARHASASLAGANADHVLAEVVGIDGGQIILMPFGSVQGLAAGNEVIALGGRAEFRVGE 123

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRVI+A G P+DG  +      + ++ +     M R R++   +TG+R ID    L 
Sbjct: 124 ALLGRVIDAFGAPLDGLAAPVLLPEARKLKAAPINPMRRPRIDTILETGVRSIDALLTLG 183

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218
            GQRIG+FAGSG+GKSTLL M AR    +  +I+L+GERGREV+EFI+  LG D LK+SV
Sbjct: 184 RGQRIGIFAGSGVGKSTLLGMIARHMDAEVNVIALIGERGREVKEFIDKQLGADGLKRSV 243

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V+VAT+D+  + R  A   A+TIAEYF   G  V+L +DSITRFA + REI   +GE P 
Sbjct: 244 VIVATADQPALSRVRAVYAALTIAEYFRDLGKQVVLTMDSITRFAMARREIGLAAGEPPT 303

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           ARGY  SVF+ELP L ER G +    G ITA+++VLV+GD+ N+PI+D++R+ILDGH+VL
Sbjct: 304 ARGYTPSVFAELPELCERCG-TAPSGGAITALLTVLVEGDDLNEPISDALRAILDGHVVL 362

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           +R +A +G+YP +D L S SRL     + +E+ +      ++   E  R +  +G Y  G
Sbjct: 363 SRQIAHQGQYPAIDVLKSASRLLPDLSTPEERAVGGRAIQILAMLERNRQMVELGAYERG 422

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436
            +  LD+A+   P +  +L Q+      ++  Q++   
Sbjct: 423 TNPELDRALACAPHLKTWLSQAEGGARRDEAMQQLAAA 460


>gi|150187229|emb|CAK30201.1| ATP synthase alpha subunit [Streptococcus dysgalactiae subsp.
           equisimilis]
          Length = 367

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 156/368 (42%), Gaps = 13/368 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 6   AMSGELLEFENG---AYGMAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 63  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 122 QRELIIGDRQTGKTSVAIDAILNQKGQNMICIYVAIGQKESTVRTQVETLRRYGALDYTI 181

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 182 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 241

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 242 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQI 301

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 302 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 358

Query: 397 PGVDLILD 404
             +D    
Sbjct: 359 SDLDAATQ 366


>gi|75318982|sp|O98766|ATPB_ASACA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|4099327|gb|AAD00585.1| ATP synthase beta subunit [Asarum canadense]
          Length = 498

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V     E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQXXEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVXEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAXKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|20384961|gb|AAM19147.1| ATP synthase beta subunit [Coleochaete sp. 18a1]
          Length = 402

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDQLGPVDST- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|149384413|gb|ABR25029.1| ATP synthase beta chain [Asplenium praemorsum]
          Length = 426

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|313665019|ref|YP_004046890.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50]
 gi|312949426|gb|ADR24022.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50]
          Length = 476

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 117/422 (27%), Positives = 188/422 (44%), Gaps = 14/422 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRI 65
           +    +   KN     G I  +      V      +  + D ++        + +V   I
Sbjct: 1   MVSSKKTIDKNKTQVIGKIIQVLGPVVDVKFSENNIPKIYDALIVDNNGKKLVLEVEQNI 60

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             +IV    +G  E +  G  V +              GR+ N LG PID    L     
Sbjct: 61  GDEIVRTIAMGPTEGLKRGLDVINTNSPITAPVGNEVLGRMFNVLGDPIDEKPDLDV--K 118

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +
Sbjct: 119 RLPIHRDAPIYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINN 178

Query: 185 DCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
                    + + VGER RE  +   +++   +  K+ +V    +E P  R    LT +T
Sbjct: 179 IAKAHNGVSVFAGVGERTREGNDLYHEFIEAGVLNKTCLVFGQMNEPPGARMRVALTGLT 238

Query: 241 IAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           IAEYF  K   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 239 IAEYFRDKKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  IVL+RS+A  G YP VDPLAS SR
Sbjct: 297 TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASSSR 356

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           + D      +   +   +   + +++E + I  I G     +      V +   I +FL 
Sbjct: 357 VLDPEIVGQEHYDIALKVQITLQKYQELQSIIAILGMDELSEED-KLIVQRARKIRNFLS 415

Query: 419 QS 420
           QS
Sbjct: 416 QS 417


>gi|260586964|ref|ZP_05852877.1| ATP synthase F1, beta subunit [Blautia hansenii DSM 20583]
 gi|260542648|gb|EEX23217.1| ATP synthase F1, beta subunit [Blautia hansenii DSM 20583]
          Length = 462

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 184/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V    Q +  + D ++ +      + +V   I    V    +   + +
Sbjct: 4   GKIVQVMGPVVDVEFQEQDLPSIKDALIVELNGKKVVMEVAQHIGNHTVRCIMLASSDGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G+   +       GR+ N LG+ ID  + L   +    I    P    +  
Sbjct: 64  CKDMEVTATGQGISVPVGKETLGRLFNVLGETIDKGEQLDDAE-HWVIHRDPPAFDEQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWSEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEADVVGQEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + +++E +DI  I G     D    K V +   +  FL Q 
Sbjct: 361 KVQEYLQKYKELQDIIAILGMEELSDED-KKVVARARKLQKFLSQP 405


>gi|123325617|gb|ABM74433.1| ATP synthase beta subunit [Citrus ichangensis]
          Length = 466

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++         +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPISVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|168185932|ref|ZP_02620567.1| ATP synthase F1, beta subunit [Clostridium botulinum C str. Eklund]
 gi|169295978|gb|EDS78111.1| ATP synthase F1, beta subunit [Clostridium botulinum C str. Eklund]
          Length = 464

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 114/405 (28%), Positives = 188/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S  +  + + +     +   + +V   I  D+V    +   E +
Sbjct: 7   GRVVQVIGPVIDIKFDSDCLPNIYNAIEIDMGDRILITEVEQHIGDDVVRTIAMESTEGL 66

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   V       +       GR+ N LGK ID +    K +    I    P    +  
Sbjct: 67  KRGMKAVNTEKPISVPVGNEILGRLFNVLGKTIDEEGEF-KAEEYYPIHRPAPTFEEQSV 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 126 EPEMFETGIKVIDLVAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G NVLL +
Sbjct: 186 RTREGNDLYYEMKESGVINKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQNVLLFI 245

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 246 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVP 303

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +   +  +
Sbjct: 304 ADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDVAIN 363

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + H++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 364 VKHILERYKELQDIIAILGVDELSEED-KLVVSRARKVQRFLSQP 407


>gi|130750318|gb|ABO32264.1| ATP synthase subunit B [Aphelia brizula]
          Length = 427

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 166/367 (45%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   E +  G  V   G    +       GR+ N LG+P+D    +    ++ 
Sbjct: 2   NRVRAVAMSATEGLMRGMEVVDTGAPLSVPVGKATLGRIFNVLGEPVDNLGPVDTS-VTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKDLAESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +K +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKKASITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  ++   +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPQIVGNEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|11908163|gb|AAD11741.2| ATP synthase beta subunit [Amaroria soulameoides]
          Length = 433

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 168/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  B  V    +   + ++ G  V   G    +       GR+ N LG+P+D
Sbjct: 2   NMXCEVQQLLGBNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATXGRIFNVLGEPVD 61

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 62  NLGPVD-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 120

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 121 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQ 180

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF    + N+LL +D+I  F  +  E++   G +P A GY
Sbjct: 181 MNEPPGARMRVGLTALTMAEYFRDVNEXNLLLFIDNIFXFVQAGSEVSALLGXMPSAVGY 240

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L +RI  +   +G+IT++ +V V  D+  DP      + LD   VL+R L
Sbjct: 241 HPTLSTEMGSLXQRI--TSTXEGSITSIQAVYVPADDLTDPAPAXTFAHLDATTVLSRGL 298

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 299 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 358

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 359 D-RLTVARARKIERFLSQP 376


>gi|296532596|ref|ZP_06895301.1| ATP synthase F1 sector beta subunit [Roseomonas cervicalis ATCC
           49957]
 gi|296267087|gb|EFH13007.1| ATP synthase F1 sector beta subunit [Roseomonas cervicalis ATCC
           49957]
          Length = 480

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 99/423 (23%), Positives = 183/423 (43%), Gaps = 22/423 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICP 74
           S  +    G ++ +      V   S+   + + +  +      + +V   +    V    
Sbjct: 2   STAMKNNVGKVTQVLGAVVDVQFPSELPGIQNALQVKIGERTLVLEVAQHLGERTVRTIA 61

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR++N +G+PID    +     +  I  + P
Sbjct: 62  MDTTDGLVRGAEVVDTGAGIAVPVGEGTLGRILNVIGEPIDERGPVPHAK-TYTIHREAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              ++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +         
Sbjct: 121 AFEDQATAAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVTIQELINNIAKGHGGVS 180

Query: 191 IISLVGERGREVREFIEDYLGDNL-----------KKSVVVVATSDESPILRKMAPLTAV 239
           + + VGER RE  +   + +   +            K  +V    +E P  R    L+ +
Sbjct: 181 VFAGVGERTREGNDLYHEMVDAGVIKLGENGSTEGSKVALVYGQMNEPPGARARVALSGL 240

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           ++AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI 
Sbjct: 241 SMAEYFRDEQGQDVLFFIDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI- 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+  +P VDPL S S
Sbjct: 300 -TSTKKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEQAIFPAVDPLDSTS 358

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R  D      +  K    +  ++  ++  +DI  I G     +      V +   +  FL
Sbjct: 359 RALDPRIIGEEHYKTAREVQRILQTYKSLQDIIAILGMDELSEED-KLVVARARKLQRFL 417

Query: 418 KQS 420
            Q 
Sbjct: 418 SQP 420


>gi|226487052|emb|CAX75391.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Schistosoma japonicum]
          Length = 517

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 186/418 (44%), Gaps = 18/418 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-VIRINLDIVYICPV 75
            +     G + ++      V        + + +  +G+    + +    +  + V    +
Sbjct: 43  SSTAASTGRVVAVIGAVVDVQFDDNLPPILNALEVKGRTPRLILEIAQHLGENTVRTIAM 102

Query: 76  GIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G   V   G   I       GR++N +G+PID    + K  +   I    P 
Sbjct: 103 DGTEGLVRGQQCVDTGGPICIPVGPETLGRIMNVIGEPIDERGPI-KTKMMSGIHQDAPN 161

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
            ++    ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 162 FIDMSTEQEILETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSV 221

Query: 192 ISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
            + VGER RE  +   + +         N  K  +V    +E P  R    LT +T+AEY
Sbjct: 222 FAGVGERTREGNDLYHEMITTGVIDLKGNNSKVSLVYGQMNEPPGARARVALTGLTVAEY 281

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +
Sbjct: 282 FRDQEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTK 339

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D 
Sbjct: 340 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDP 399

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +E   +   +  ++      +DI  I G     +      V +   I  FL Q 
Sbjct: 400 NIVGEEHYSVARGVRKILQENRSLQDIIAILGMDELSEED-RLTVSRARKIQRFLSQP 456


>gi|308238027|emb|CBK55604.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
 gi|308238037|emb|CBK55609.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 421

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 11/387 (2%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPS 98
            Q   + + +V    N     Q  ++   +     +G  E +  G  V   G    +   
Sbjct: 4   GQVPEIMEAIVVDENNLTIEVQA-QLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVG 62

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR++N LG+P+DG   +   D    I    P         +  +TGI+VID+  P 
Sbjct: 63  HATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +     + 
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      +   +  S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G     +      V +   I  +L Q 
Sbjct: 360 GMDELSEDD-KLLVSRARKIQRYLSQP 385


>gi|119350547|gb|ABL63224.1| AtpB [Spermatozopsis similis]
          Length = 393

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 168/365 (46%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           +    +   E +  G  V   G+   +       GR+ N LG+P+D    + +   ++ I
Sbjct: 5   IRAVSMNPTEGLMRGMDVVDTGKSLSVPVGKVTLGRIFNVLGEPVDNMGPV-EVKETLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRKSPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKSLADSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D   +   S+   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGDKHYQGAQSVKRTLQRYKELQDIIAILGLDELSEED-RLVVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|326526259|dbj|BAJ97146.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 494

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 190/426 (44%), Gaps = 18/426 (4%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68
           AQ     +    ++ G IS +      V    +   + + +  +G ++  + +V +   D
Sbjct: 10  AQCLFSTANAAALKKGQISQVIGAVVDVQFEGEIPPILNALEVEGVDNRLVLEVAQHLGD 69

Query: 69  -IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
             V    +   E +  G  V   G    I       GR++N +G PID    + +     
Sbjct: 70  SRVRTIAMDSTEGLVRGQGVIDTGAPISIPVGPETLGRIMNVIGDPIDERGPI-ETKKRY 128

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I  + P    +    +   TGI+V+D+  P   G +IG+F G+G+GK+ ++     +  
Sbjct: 129 PIHREAPSFDEQGSGAEILITGIKVVDMLAPYARGGKIGLFGGAGVGKTVVIQELINNVA 188

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPL 236
                  + + VGER RE  +   + +   +        +  ++    +E P  R    L
Sbjct: 189 KAHGGYSVFAGVGERTREGNDLYHEMIESGVIKINQPGSRCALIYGQMNEPPGARARVGL 248

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L E
Sbjct: 249 TGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGALQE 308

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R+L E G YP VDPL 
Sbjct: 309 RI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAFLDATTVLSRALTELGIYPAVDPLD 366

Query: 356 SVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR+ D     +   ++   +  L+  ++  +DI  I G     +      V +   I 
Sbjct: 367 STSRILDPTVVGEKHYQVARGVQKLLQDYKSLQDIIAILGMDELSEDD-KLTVARARKIQ 425

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 426 KFLSQP 431


>gi|123325649|gb|ABM74449.1| ATP synthase beta subunit [Citrus reticulata]
          Length = 466

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSSSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|157888985|dbj|BAF80940.1| beta subunit of ATP synthesis [Paradavallodes multidentatum]
          Length = 464

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N+     D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNTAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+PID    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPIDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|150187318|emb|CAK30226.1| ATP synthase alpha subunit [Streptococcus alactolyticus]
 gi|154424907|emb|CAL18556.1| ATP synthase alpha subunit [Streptococcus alactolyticus]
          Length = 367

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 158/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ +          G    +  + V I  +G    I  GD+V   G+  
Sbjct: 1   RARGLDNTMS-GELLEFSNG---AFGMAQNLETNDVGIIILGDFSTIREGDVVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+P+DG   + K   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPVDGLGDI-KTTATRPVEAPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLQENLFNSGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|37720945|gb|AAN32475.1| ATP synthase beta subunit [Burmannia capitata]
          Length = 477

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V   K+ D LGQ I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVVFPPGRMPNIYNALVV--KSRDTLGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+ +D    +     +  I    P
Sbjct: 59  MSATDGLMRGMEVIDTGSPLSVPVGGATLGRIFNVLGETVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|6689074|emb|CAB65380.1| ATP synthase beta subunit [Roridula gorgonias]
          Length = 498

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V         + + ++ +G   D  GQ I +  ++        V    
Sbjct: 21  GRIVQIMGPVLDVAFSPGXMPNIYNALIVKG--RDTAGQPINVTXEVQQLLGNNRVXXVX 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   +    G      G    +       GR+ N LG+P+D    +   D +  I    P
Sbjct: 79  MSATDGXMRGMXXIDTGDPLSVPVGXATLGRIFNVLGEPVDNLGPVD-TDRTWPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLNSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPQIVGKEHYETAQKVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|34536479|dbj|BAC87673.1| beta subunit of ATP synthase [Chlamydomonas chlorococcoides]
          Length = 376

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + S+ I   
Sbjct: 1   VSMNPTDGLTRGVEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEASLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  S+ SE+ +L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPSLSSEMGQLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPSVTFAHLDATTVLSRGLASKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYESAQNVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|302747452|gb|ADL63207.1| Atp1 [Escallonia rubra]
          Length = 349

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAVDTILNQKEMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQ 349


>gi|89574031|gb|ABD77241.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Aotus trivirgatus]
          Length = 433

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 107/407 (26%), Positives = 185/407 (45%), Gaps = 18/407 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDL 86
           ++      V        + + +  QG+ +  + +V   +    V    +   E +  G  
Sbjct: 1   AVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQK 60

Query: 87  VFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G   +I       GR++N +G+PID    + K      I ++ P  M     ++  
Sbjct: 61  VLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFMEMSVEQEIL 119

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202
            TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE 
Sbjct: 120 VTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 179

Query: 203 REFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
            +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 180 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 240 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   + 
Sbjct: 298 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 403


>gi|15674808|ref|NP_268982.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes M1 GAS]
 gi|71910394|ref|YP_281944.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS5005]
 gi|81856117|sp|Q9A0I7|ATPB_STRP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|13621938|gb|AAK33703.1| putative proton-translocating ATPase, beta subunit [Streptococcus
           pyogenes M1 GAS]
 gi|71853176|gb|AAZ51199.1| ATPase, beta subunit [Streptococcus pyogenes MGAS5005]
          Length = 468

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 190/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + ++    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG+ ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTQKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|21910035|ref|NP_664303.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS315]
 gi|28896267|ref|NP_802617.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes SSI-1]
 gi|71903225|ref|YP_280028.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS6180]
 gi|94988266|ref|YP_596367.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS9429]
 gi|94992140|ref|YP_600239.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS2096]
 gi|306827633|ref|ZP_07460913.1| ATP synthase F1 sector beta subunit [Streptococcus pyogenes ATCC
           10782]
 gi|81847483|sp|Q8K826|ATPB_STRP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573761|sp|Q1JCL3|ATPB_STRPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573762|sp|Q1JMI9|ATPB_STRPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573765|sp|Q48UD3|ATPB_STRPM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21904225|gb|AAM79106.1| putative proton-translocating ATPase beta subunit [Streptococcus
           pyogenes MGAS315]
 gi|28811518|dbj|BAC64450.1| putative proton-translocating ATPase, beta subunit [Streptococcus
           pyogenes SSI-1]
 gi|71802320|gb|AAX71673.1| ATPase, beta subunit [Streptococcus pyogenes MGAS6180]
 gi|94541774|gb|ABF31823.1| ATP synthase beta chain [Streptococcus pyogenes MGAS9429]
 gi|94545648|gb|ABF35695.1| ATP synthase beta chain [Streptococcus pyogenes MGAS2096]
 gi|304430196|gb|EFM33225.1| ATP synthase F1 sector beta subunit [Streptococcus pyogenes ATCC
           10782]
          Length = 468

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 190/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + ++    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG+ ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTQKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|257042720|gb|ACV32987.1| ATP synthase CF1 alpha subunit [Pinus monticola]
          Length = 507

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/435 (21%), Positives = 168/435 (38%), Gaps = 37/435 (8%)

Query: 6   ETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + +  + Y+  + V   G +  +      +  L + V  G+ V         +G  + 
Sbjct: 11  SIIRKQIKQYNDAVGVGNLGTVLQVGDGIARIHGLYE-VMAGELVEF---GDGTVGIALN 66

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKP------------ 112
           +  D V +  +G G  I  G  V   G+    P                           
Sbjct: 67  LGSDNVGVVLMGDGLMIQEGSSVRATGKIAXIPXXXX-----------XXXXXXXXXXXX 115

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           IDG   +   +  + I S  P  ++R+ V +  +TG+  ID   P+  GQR  +      
Sbjct: 116 IDGKGQIXASEFRL-IESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQT 174

Query: 173 GKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229
           GK+ + +    +        +   +G+R   V + +  +        ++VV  T+D    
Sbjct: 175 GKTAVATDTILNQKSQNVICVYVAIGQRASSVAQVVNTFQERGAMEYTIVVAETADSPAT 234

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP T   +AEYF  K  +  +I D +++ A + R+++      P    YP  VF  
Sbjct: 235 LQYLAPYTGAALAEYFMYKKQHTSIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYL 294

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +  +G++TA+  V     + +  I  +  SI DG I L+  L   G 
Sbjct: 295 HSRLLERAAKLSSQLGEGSLTALPIVETQAGDVSAYIPTNAISITDGQIFLSADLFNAGI 354

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     KK+   L   + +F E         +   +D      +
Sbjct: 355 RPAINVGLSVSRVGSAAQIKAMKKVAGKLKLELAQFAELE---AFAQFASDLDKATQDQL 411

Query: 408 HQVPIIYDFLKQSPS 422
            +   + + LKQS S
Sbjct: 412 ARGQRLRELLKQSQS 426


>gi|251772441|gb|EES53008.1| flagellar protein export ATPase FliI [Leptospirillum
           ferrodiazotrophum]
          Length = 457

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 150/436 (34%), Positives = 246/436 (56%), Gaps = 11/436 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65
           E +  L  D+S +   +GG +  +  V   +      + +G+             +V+  
Sbjct: 20  EKMEALLSDFSPD--QEGGLV--VQGVGLMIEAKGMSLGVGEICTLLSD-PPVDAEVVGF 74

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
                 + P+G  E +  G  +    R   +  S  W GRV++ LG+P+DG   L  G +
Sbjct: 75  REGRTLLMPLGDLEGVRPGTRLVRKSRITSVRISPHWLGRVLDPLGRPMDGR-PLPPGTV 133

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + +  +    + R+R+E+     +R I+    +  GQ+IG+FAG G+GKSTL+ M AR+
Sbjct: 134 EVPLRGRPLNPLLRRRIERPLDLSVRSINALATVGEGQKIGIFAGPGVGKSTLMGMMARN 193

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+L+GERGREVREF+  D   + L ++V+VVAT +  P+L+  A   A+ IAE
Sbjct: 194 ASVDVNVIALIGERGREVREFLERDLGPEGLSRTVLVVATGELPPLLKTRATHFAMAIAE 253

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
            F  +G NVL ++DS+TR+A ++REI   +GE P ARG+  SVF++LPRL+ER G +E  
Sbjct: 254 MFRDRGQNVLFMMDSLTRYAGALREIGLATGEPPSARGFTPSVFAQLPRLVERAGCAEGP 313

Query: 304 KGNITAVISVLVDGDNH-NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            G+IT + +VLV+G++  +DP+++++ +ILDGHI L+R+LA EG +P V+P+ S+SR+  
Sbjct: 314 -GSITGIYTVLVEGEDLPDDPLSEALTAILDGHIHLSRTLAHEGVFPAVEPMGSLSRVMA 372

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                D + L      L   +  + D+  IG Y  G D  LD+AV     +  FL+Q   
Sbjct: 373 DIVDEDRQVLAREWRRLYGLYRRSEDLIRIGAYVAGGDPELDRAVRLHESMTGFLRQGRE 432

Query: 423 D-LSSEDVFQEITKKL 437
           + +  E+ F+++ + L
Sbjct: 433 ERVGLEEAFEDLARSL 448


>gi|302875870|ref|YP_003844503.1| ATP synthase F1, beta subunit [Clostridium cellulovorans 743B]
 gi|307689303|ref|ZP_07631749.1| F0F1 ATP synthase subunit beta [Clostridium cellulovorans 743B]
 gi|302578727|gb|ADL52739.1| ATP synthase F1, beta subunit [Clostridium cellulovorans 743B]
          Length = 466

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 114/408 (27%), Positives = 190/408 (46%), Gaps = 17/408 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVGIG 78
           G +  +      +   ++ +  + + V    +N + L  V  I      DIV    +   
Sbjct: 6   GKVVQVIGPVIDIKFSTETLPNIFNAVEVDLENGEKL--VAEIEQHMGDDIVRAISMQAT 63

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G      G    +       GR+ N LG+PID    +   D    I    P   +
Sbjct: 64  EGVRRGMKAIDTGAPITVPVGEATLGRLFNTLGQPIDNKGEVV-SDTMYPIHRNPPSFED 122

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +   ++ F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + 
Sbjct: 123 QSSKQEMFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTG 182

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AE F  KG +VL
Sbjct: 183 VGERTREGNDLYHEMSDSGVISKTALVFGQMNEPPGARMRVALTGLTMAENFRDKGQDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 243 LFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAV 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+R++ E G YP VDPL S SR+ D      +  + 
Sbjct: 301 YVPADDLTDPAPATTFAHLDATTVLSRAIVEIGIYPAVDPLESTSRILDPRIVGKEHYET 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              + +++ R++E +DI  I G     +      V +   +  FL QS
Sbjct: 361 ALEVKNILERYKELQDIIAILGVDELSEED-KLIVGRARKVQRFLSQS 407


>gi|218248404|ref|YP_002373775.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 8801]
 gi|257061470|ref|YP_003139358.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 8802]
 gi|226740186|sp|B7K2R8|ATPB_CYAP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|218168882|gb|ACK67619.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 8801]
 gi|256591636|gb|ACV02523.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 8802]
          Length = 483

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 189/421 (44%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
              G I+ +          S  +  + + +  QGKN          +V ++  D  V   
Sbjct: 8   TNVGKITQVIGPVVDAEFPSGKLPRIYNALKIQGKNPAGNDVSVTCEVQQLLGDNQVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  +   G    +       GR+ N LG+P+D    +    L+  I    
Sbjct: 68  AMSGTDGLVRGMDIVDTGAPISVPVGKVTLGRIFNVLGEPVDEKGDVDMS-LTSPIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P  ++ +   K F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +   +    
Sbjct: 127 PKLIDLETKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAINHGGV 186

Query: 191 -IISLVGERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+
Sbjct: 187 SVFAGVGERTREGNDLYNEMIESKVINPDNPEESKIALVYGQMNEPPGARMRVGLSGLTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT+V +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSVQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +      ++   + R++E +DI  I G     +    + V +   I  FL Q
Sbjct: 365 LQPGIVGEEHYNTARAVQSTLQRYKELQDIIAILGLDELSEED-RRTVDRARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|139474050|ref|YP_001128766.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes str.
           Manfredo]
 gi|166222419|sp|A2RFC2|ATPB_STRPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|134272297|emb|CAM30551.1| ATP synthase beta chain [Streptococcus pyogenes str. Manfredo]
 gi|323126996|gb|ADX24293.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 468

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 190/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + ++    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG+ ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTQKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|7708337|emb|CAB89905.1| ATP synthase beta subunit [Hydrophyllum canadense]
          Length = 489

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
           + D  GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 49  SRDTAGQPINVXCEVQQLLGNNRVRAVAMSATDVLTRGMEVIDTGAPLSVPVGGATLGRI 108

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 109 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 167

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 168 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAE 227

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 228 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 287

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 288 GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPXTTFAHLD 345

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 346 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 405

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 406 LGLDELSEDD-RLTVARARKIERFLSQP 432


>gi|302747646|gb|ADL63304.1| Atp1 [Sphenoclea zeylanica]
          Length = 349

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 152/352 (43%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKALLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGLPIDGRGALSAHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGD 212
            +      GK+ +      +                 +   +G++   V + ++    G+
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEGN 177

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|33318667|gb|AAQ05217.1| ATP synthase beta subunit [Metasequoia glyptostroboides]
          Length = 478

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+        + + ++   K++D  GQ I +  ++        V    
Sbjct: 6   GRIAQIIGPVLDVSFPPGNMPRIYNSLIV--KDNDTTGQPISVTCEVQQLLGNNKVRAVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 64  MSATDGLMRGMRVIDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPVDALTTS-PIHRSAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 123 AFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 182

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 183 VFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 242

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 243 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 300

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 301 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 360

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 QPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEDD-RLIVARARKIERFLSQP 419


>gi|308238033|emb|CBK55607.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 420

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 11/387 (2%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPS 98
            Q   + + +V    N     Q  ++   +     +G  E +  G  V   G    +   
Sbjct: 4   GQVPEIMEAIVVDANNLTIEVQA-QLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVG 62

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR++N LG+P+DG   +   D    I    P         +  +TGI+VID+  P 
Sbjct: 63  HATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +     + 
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      +   +  S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G     +      V +   I  +L Q 
Sbjct: 360 GMDELSEDD-KLLVSRARKIQRYLSQP 385


>gi|149384389|gb|ABR25017.1| ATP synthase beta chain [Asplenium contiguum]
          Length = 426

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|153834312|ref|ZP_01986979.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
 gi|148869320|gb|EDL68334.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01]
          Length = 467

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 183/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEV-YSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYYEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|119350463|gb|ABL63182.1| AtpB [Carteria obtusa]
          Length = 392

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 168/366 (45%), Gaps = 20/366 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 5   VRAVAMNPTEGLMRGMEVLDTGKPICVPVGKVTLGRIFNVLGEPVDNLGPVNAEE-KLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             K P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYAEMKESGVIVEKNLPDSKVALVYGQMNEPPGARMRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+ +DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLSDPAPSTTFTHLDATTVLSRNLAAKGIYPAVDPLES 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIY 414
            S +       +       S+   + R++E +DI  I G     +   D+ V  +   I 
Sbjct: 302 TSTMLQPWIVGEKHYDSARSVKKTLQRYKELQDIIAILGLDELSEE--DRLVDARARRIE 359

Query: 415 DFLKQS 420
             L Q 
Sbjct: 360 RLLSQP 365


>gi|222053555|ref|YP_002535917.1| ATP synthase F1, beta subunit [Geobacter sp. FRC-32]
 gi|254808152|sp|B9LZ84|ATPB_GEOSF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|221562844|gb|ACM18816.1| ATP synthase F1, beta subunit [Geobacter sp. FRC-32]
          Length = 470

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/411 (26%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTC-------LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           G IS +      V         +   + + +  +   +N+  L     +  + V    + 
Sbjct: 6   GKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDNENNLVLEVAQHLGENSVRTIAMD 65

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+   +       GR++N +G+P+D    +   D    I  + P  
Sbjct: 66  STDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVN-ADKEYGIHREAPEF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           +++    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 125 VDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVF 184

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   +     +  K+ +V    +E P  R    L+A++IAEYF  +   
Sbjct: 185 AGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQ 244

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V
Sbjct: 245 NVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTNKGSITSV 302

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      + 
Sbjct: 303 QAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEH 362

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 363 YAIARQVQYVLQKYKDLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 412


>gi|300669387|dbj|BAJ11492.1| ATP synthase beta-subunit [Chloromonas pseudoplatyrhyncha]
          Length = 376

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + S+ I   
Sbjct: 1   VSMNPTDGLTRGVEVMDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEASLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|7708155|emb|CAB89966.1| ATP synthase beta subunit [Apostasia stylidioides]
          Length = 494

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRV 105
             D++GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 49  GQDSIGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAXLSVPVGGTTLGRI 108

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 109 FNVLGEPVDNLGPVD-TRTTSPIHRSAPTFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 167

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 168 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESGVINEKNLAE 227

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 228 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 287

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 288 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 345

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  I
Sbjct: 346 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAI 405

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 406 LGLDELSEED-RLTVARARKIERFLSQP 432


>gi|4519274|dbj|BAA75552.1| ATP synthase beta-subunit [Volvox carteri]
          Length = 376

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P       LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGACMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|166033116|ref|ZP_02235945.1| hypothetical protein DORFOR_02838 [Dorea formicigenerans ATCC
           27755]
 gi|166027473|gb|EDR46230.1| hypothetical protein DORFOR_02838 [Dorea formicigenerans ATCC
           27755]
          Length = 470

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 189/407 (46%), Gaps = 14/407 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   +    +   + D +     +   + +V   +    V    +   E +
Sbjct: 8   GRIVQVMGPVVDVLFEDGELPNIKDALEVDNGDKTCIMEVAQHLGNSEVRCLMLAASEGL 67

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ ID    + K     EI  + P    +  
Sbjct: 68  HKDMEVRATGSGIKVPVGDQTLGRLFNVLGQTIDDGKEIEKDAERWEIHRQAPTFEEQSP 127

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 128 AVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGE 187

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 188 RSREGNDLWTEMKASGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLF 247

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 248 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 305

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  K+ +
Sbjct: 306 PADDLTDPAPATTFAHLDATTVLSRKVVEQGIYPAVDPLESNSRILEADIVGEEHYKVAN 365

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +T ++ +++E +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 366 QVTEILQKYKELQDIIAILGMEELSDE--DKATVMRARKIQKFLSQP 410


>gi|255020241|ref|ZP_05292310.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756]
 gi|254970383|gb|EET27876.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756]
          Length = 469

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 191/421 (45%), Gaps = 23/421 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDF---VVHQGKNSDNLGQVIRI 65
           AQ AE    ++V   G +  I      V  + + V + D    +  Q +  D + + I  
Sbjct: 4   AQAAEKAVGHIVQVIGPVIDIAFPRGEVPEIMEAVVVEDRQLTIEIQTQLGDGVARGIA- 62

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
                    +G  E +  G  V   G    +       GR++N LG P+DG   + + D 
Sbjct: 63  ---------MGASEGLKRGLKVRRTGAAISVPVGHGTLGRIMNVLGDPVDGKGEV-QCDQ 112

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
              I    P         +  +TG++VID+  P   G ++G+F G+G+GK+ L+    R+
Sbjct: 113 RTPIHRAAPAFDELAASTEILETGVKVIDLVCPFAKGGKVGLFGGAGVGKTVLMMELIRN 172

Query: 185 DCFDK---VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
              +     + + +GER RE  +F  +     +  K  +     +E P  R    LT +T
Sbjct: 173 IAIEHTGYSVFAGIGERTREGNDFYHEMTESKVLDKVALCYGQMNEPPGNRLRVGLTGLT 232

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           +AE+F  +G ++L+ +D+I R+  +  E++   G +P A GY  ++  E+ +L ERI  +
Sbjct: 233 MAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--T 290

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             + G+IT+V +V V  D+  DP   +  + LD  +VL+R +AE G YP +DPL S SR 
Sbjct: 291 STKVGSITSVQAVYVPADDITDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQ 350

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
            D      +   +  +    + R++E +DI  I G            V +   I  FL Q
Sbjct: 351 LDPQIVGQEHYDVARACQKTLQRYKELQDIIAILGMDELS-ADDKVLVARARKIQRFLSQ 409

Query: 420 S 420
            
Sbjct: 410 P 410


>gi|114509236|gb|ABI75186.1| ATPase alpha subunit [Triglochin palustris]
          Length = 361

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 159/365 (43%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNATAKENXKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ ++P +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILESANALEYSILVAATASDPAPLQFLSPYSGCALGEYFRDHGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    + 
Sbjct: 296 AYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|77921155|gb|ABB05343.1| AtpD [Micavibrio sp. EPB]
          Length = 425

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 165/368 (44%), Gaps = 16/368 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+++ +G PID   +     
Sbjct: 28  LGENTVRCIAMDTTDGLVRGQEVLDTGDAISVPVGPEVLGRILDVIGNPIDNLPA-PNAK 86

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  +++    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 87  KRYPIHRPAPEFVDQATEAEQLVTGIKVVDLLCPYLKGGKIGLFGGAGVGKTVTIQELIN 146

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +         + + VGER RE  +   + +       D   K  +V    +E P  R   
Sbjct: 147 NIAKGHGGVSVFAGVGERTREGNDLYHEMMDAGVIKLDGESKVGLVFGQMNEPPGARARV 206

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +++AEYF  +   +VL  +D++ RF  +  E++   G +P A GY  ++ +++  L
Sbjct: 207 ALTGLSMAEYFRDEEGQDVLFFMDNVFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGAL 266

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V +V V  D+  DP   +  S LD   VL+R +AE G YP VDP
Sbjct: 267 QERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRQIAELGIYPAVDP 324

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +  K  + +   +  ++  +DI  I G     +      V +   
Sbjct: 325 LDSTSRILDPRIVGEEHYKCAADVQKTLQTYKALQDIIAILGMDELSEED-KLVVARARK 383

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 384 IQRFLSQP 391


>gi|30351891|emb|CAD48098.1| ATP synthase beta subunit [Merwilla sp. Puff H219]
          Length = 493

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQIHVTCEVQQLLGYNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +  +    GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDALTRGMEVIDTGAALSVPVAGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+T I+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTTLSIFETAIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIANAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVVERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|308238035|emb|CBK55608.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
 gi|308238041|emb|CBK55611.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 419

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 11/387 (2%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPS 98
            Q   + + +V    N     Q  ++   +     +G  E +  G  V   G    +   
Sbjct: 4   GQVPEIMEAIVVDENNLTIEVQA-QLGDGVARGIAMGSSEGLKRGLAVTRTGAPISVPVG 62

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR++N LG+P+DG   +   D    I    P         +  +TGI+VID+  P 
Sbjct: 63  HATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +     + 
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      +   +  S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G     +      V +   I  +L Q 
Sbjct: 360 GMDELSEDD-KLLVSRARKIQRYLSQP 385


>gi|311743981|ref|ZP_07717787.1| ATP synthase F1 sector alpha subunit [Aeromicrobium marinum DSM
           15272]
 gi|311313111|gb|EFQ83022.1| ATP synthase F1 sector alpha subunit [Aeromicrobium marinum DSM
           15272]
          Length = 546

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 91/417 (21%), Positives = 167/417 (40%), Gaps = 22/417 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G ++        V  L       + +  +      LG  + +++  + +  +G    I
Sbjct: 31  EVGIVAEAGDGIARVEGL-PSAMANELLEFEDG---TLGLALNLDVREIGVVILGEFSGI 86

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +     + GRV++ LG PIDG   + +      +  + P  M R+ 
Sbjct: 87  EEGQKVRRTGEVLSVPVGDAYLGRVVDPLGSPIDGLGEI-ESSKRRALELQAPNVMQRKS 145

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFDK-----V 190
           V +   TG++ ID  TP+  GQR  +      GK      T+++  A  +  D+      
Sbjct: 146 VHEPLMTGLKSIDSLTPIGRGQRQLIIGDRQTGKTAIAIDTIINQKAFWESGDESKQVRC 205

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++G  +             + + +V A + +S   + +AP T   I + +   G
Sbjct: 206 IYVAIGQKGSTIAAVRGALEEAGALEYTTIVAAPASDSAGFKYLAPYTGSAIGQEWMYAG 265

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            +VL++ D +++ A + R ++      P    YP  VF    RLLER      E   G++
Sbjct: 266 KHVLIVFDDLSKQAEAYRAVSLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDELGAGSM 325

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T +  +    ++ +  I  +V SI DG I L   L    + P VD   SVSR+   A   
Sbjct: 326 TGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNANQRPAVDVGISVSRVGGAAMQK 385

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             K +  SL   + ++   R +     +   +D    + + +   I +  KQ   + 
Sbjct: 386 SMKAVTGSLKVELAQY---RAMEAFAMFASDLDAASKQQLARGQRIMELFKQGQYEP 439


>gi|123325707|gb|ABM74478.1| ATP synthase beta subunit [Oxanthera sp. V 7758]
          Length = 461

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 150 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLS 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 210 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|138277483|gb|AAQ09252.2| ATP synthase beta subunit [Taxus brevifolia]
          Length = 478

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I+ I      V+        + + ++ +  N++        +V ++  +  V    + 
Sbjct: 6   GRIAQIIGPVLDVSFPPGNMPKIYNSLIVKDNNTNGQPICVTCEVQQLLGNNKVRAVAMS 65

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G +V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 66  ATDGLMRGMIVIDTGAPLSVPVGETTLGRIFNVLGEPVDDLGPVNALTTS-PIHRSAPAF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 125 TQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 184

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  ++               K  +V    +E P  R    LTA+T+AEY
Sbjct: 185 GGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 244

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 245 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 302

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S +   
Sbjct: 303 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQP 362

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 SIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|301632661|ref|XP_002945400.1| PREDICTED: ATP synthase subunit alpha-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 465

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 91/388 (23%), Positives = 163/388 (42%), Gaps = 21/388 (5%)

Query: 51  HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINAL 109
           H+     + G  + +  D V    +G  E I  GD V   GR   +       GRV+NAL
Sbjct: 3   HRRDGQPSFGLALNLERDSVGAVILGEYEHICEGDTVKCTGRILEVPVGPELVGRVVNAL 62

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+PIDG   +    ++  I    P  + RQ V++   TG++ ID   P+  GQR  +   
Sbjct: 63  GQPIDGKGPIN-AKMTDVIEKVAPGVIARQSVDQPLATGLKSIDSMVPIGRGQRELIIGD 121

Query: 170 SGIGKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDE 226
              GK+ +      +        I   +G++   ++  +           ++VV A++ E
Sbjct: 122 RQTGKTAVAVDTIINQKGQGVTCIYVAIGQKASSIKNVVRALEQAGAMDYTIVVAASASE 181

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S  ++ ++  +  T+ EYF  +G + L++ D +++ A + R+++      P    YP  V
Sbjct: 182 SAAMQYVSAYSGCTMGEYFRDRGQDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDV 241

Query: 287 FSELPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           F    RLLER                   + G++TA+  +     + +  +  +V SI D
Sbjct: 242 FYLHSRLLERAARVNADYVEAFTQGQVKGKTGSLTALPVIETQAGDVSAFVPTNVISITD 301

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           G I L  SL   G  P ++   SVSR+   A +   K L   +   + ++ E   +    
Sbjct: 302 GQIFLETSLFNAGIRPAINAGISVSRVGGAAQTKLIKGLSGGIRTDLAQYRE---LAAFA 358

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   +D    K + +   + + LKQ  
Sbjct: 359 QFASDLDDATRKQLDRGARVTELLKQPQ 386


>gi|123325667|gb|ABM74458.1| ATP synthase beta subunit [Fortunella margarita]
          Length = 466

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRI-NLDIVYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++   + V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLXNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|133917162|emb|CAJ33222.1| ATP synthase alpha subunit [Lactobacillus amylovorus]
          Length = 367

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 161/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L+  V  G+ +     +    G    +  + V I  +G  + I  GD V   GR  
Sbjct: 1   RAHGLND-VLAGELLKFDNGS---YGIAQNLESNDVGIIILGQFDNIREGDRVQRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+P+DG+  + K D +  I +K P  M+RQ V++  +TGI+ ID
Sbjct: 57  EVPVGDALIGRVVNPLGQPVDGEGEI-KADKTRPIEAKAPGVMDRQSVKQPLQTGIKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+   + ++  +       I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRKTGKTSLAIDTILNQKGQDVICIYVAIGQKESTVRTQVETLKR 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +  ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  +  +  + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLQSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRELES 355

Query: 389 IRLIGGYRPGVDLIL 403
               G     +D   
Sbjct: 356 FAQFG---SDLDQAT 367


>gi|119350559|gb|ABL63230.1| AtpB [Asterochloris magna]
          Length = 391

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 168/365 (46%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V + G+   +       GR+ N LG+P+D    +   D S  I
Sbjct: 5   VRAVSMNATDGLMRGMEVKNTGKPLTVPVGQATLGRIFNVLGEPVDNLGPVDNKD-SFPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVIDSSNISESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGCLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D       ++   + R++E +DI  I G     +    + V +   I  
Sbjct: 302 TSTMLQPWIVGDEHYDCAQNVKQTLQRYKELQDIIAILGLDELSEED-RQIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|112791366|gb|ABI21953.1| ATP synthase beta subunit [Dickeya paradisiaca]
          Length = 421

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 103/381 (27%), Positives = 179/381 (46%), Gaps = 11/381 (2%)

Query: 47  DFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104
           D +  +      + +V + +   +V    +G  + +  G  +V       +       GR
Sbjct: 3   DALEVENGAEKLVLEVQQQLGGGVVRCIAMGSSDGLRRGLSVVNLEHPIEVPVGKATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           ++N LG P+D    +G+ +    I    P   +    ++  +TGI+VID+  P   G ++
Sbjct: 63  IMNVLGDPVDMKGPIGEEE-RWSIHRAAPSYEDLSNSQELLETGIKVIDLICPFAKGGKV 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220
           G+F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V
Sbjct: 122 GLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLV 181

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
               +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A 
Sbjct: 182 YGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAV 241

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  + L+R
Sbjct: 242 GYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSR 299

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            +A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     
Sbjct: 300 QIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELS 359

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           +      V +   I  FL Q 
Sbjct: 360 EED-KLVVSRARKIQRFLSQP 379


>gi|74146998|dbj|BAE27439.1| unnamed protein product [Mus musculus]
          Length = 518

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 99/390 (25%), Positives = 165/390 (42%), Gaps = 30/390 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             GD+V   G    +       GRV++ALG  IDG   +G       +  K P  + R  
Sbjct: 126 KEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIG-SKTRRRVGLKAPGIIPRIS 184

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KV 190
           V +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       
Sbjct: 185 VREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYC 244

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           I   +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G
Sbjct: 245 IYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNG 304

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNI 307
            + L+I D +++ A + R+++      P    YP  VF    RLLER          G++
Sbjct: 305 KHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSL 364

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           TA+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A   
Sbjct: 365 TALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAT-- 422

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
                      L+ R     ++   G Y P
Sbjct: 423 ---------QQLLSRGVRLTELLKQGQYSP 443


>gi|323493009|ref|ZP_08098145.1| F0F1 ATP synthase subunit beta [Vibrio brasiliensis LMG 20546]
 gi|323312745|gb|EGA65873.1| F0F1 ATP synthase subunit beta [Vibrio brasiliensis LMG 20546]
          Length = 467

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 182/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + +  I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-TYSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +       +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDTARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|209878622|ref|XP_002140752.1| ATP synthase F1, beta subunit [Cryptosporidium muris RN66]
 gi|209556358|gb|EEA06403.1| ATP synthase F1, beta subunit, putative [Cryptosporidium muris
           RN66]
          Length = 558

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 187/428 (43%), Gaps = 35/428 (8%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEIS 82
           GYIS I      V        + + +  Q   +  + +V +   D  V    + + E + 
Sbjct: 73  GYISQIIGAVVDVKFDHILPSVLNALEVQDHPNKLVLEVAQHLGDNCVRTIAMDVTEGLM 132

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    + +  + + I  K P    +   
Sbjct: 133 RGQAVLDTGNPISVPVGDATLGRIMNVIGEPVDECGPI-ESTIRLPIHRKAPEYTEQGTD 191

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 192 PSILITGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKRHGGYSVFAGVGER 251

Query: 199 GREVREFIEDY------------------------LGDNLKKSVVVVATSDESPILRKMA 234
            RE  +   +                               K+ +V    +E P  R   
Sbjct: 252 TREGNDLYHEMLITGVNKKKFISMELDYKGNKYTKCDFTGSKTALVYGQMNEPPGARARV 311

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L
Sbjct: 312 ALTGLTVAEYFRDEKGQDVLLFIDNIYRFTQAGSEVSALLGRMPSAVGYQPTLATDLGSL 371

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  +KG+IT+V +V V  D+  DP + +  + LD   VL+R +AE G YP VDP
Sbjct: 372 QERI--TTTKKGSITSVQAVYVPADDLTDPASAATFAHLDATTVLSRKIAEFGIYPAVDP 429

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D +    +   +   +  L+  ++  +DI  I G     D    + V +   
Sbjct: 430 LDSTSRMLDPSIIDYEHYHVAREVQKLLQDYKSLQDIIAILGIDELNDED-RQTVTRARK 488

Query: 413 IYDFLKQS 420
           +  FL Q 
Sbjct: 489 VQKFLSQP 496


>gi|156720269|dbj|BAF76784.1| beta subunit of ATP synthesis [Davallia plumosa]
          Length = 442

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAIDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +    + V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RQTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|113910900|gb|ABI48182.1| ATPase beta subunit [Brachythecium rutabulum]
          Length = 462

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 103/394 (26%), Positives = 171/394 (43%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           ++ +G+N+   GQ I +  ++        V    +   + +  G  V   G    +    
Sbjct: 15  LIVEGQNTA--GQEINVTCEVQQLLGNNKVRAVAMSATDGLMRGMQVIDTGAPLSVPVGE 72

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+ +D    +     +  I    P           F+TGI+V+D+  P  
Sbjct: 73  ATLGRIFNVLGETVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 131

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 132 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 191

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  
Sbjct: 192 EENISESKVALVYGQMNEPPGARMRVGSTASTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 251

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 252 EVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 309

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   V +R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 310 TFAHLDATTVSSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 369

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 402


>gi|21684903|emb|CAD11578.1| ATP synthase beta subunit [Marsippospermum grandiflorum]
          Length = 491

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 110/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLG-------QVIRINLDI-VYIC 73
           G+I  I      V  L   +       VV   K+ D +G       +V ++  +  V   
Sbjct: 15  GHIVQIIGPVLDVVFLPGGLPNIYNALVV---KDRDTVGPDIHVTCEVQQLLGNNRVRAV 71

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+PID    +     +  I    
Sbjct: 72  AMNATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGQPIDNLGPVDTS-TTFPIHRSA 130

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        
Sbjct: 131 PAFIELNTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGV 190

Query: 191 -IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
            + + VGER RE  +  ++               K  +V    +E P  R    LTA+T+
Sbjct: 191 SVFAGVGERTREGNDLYKEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTM 250

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 251 AEYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 308

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             +KG IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V PL S S +
Sbjct: 309 STKKGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTM 368

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +D+  + G     +      V +   I  F  Q
Sbjct: 369 LQSNIVGKEHYETAQRVKQTSQRYKELQDVISVLGLDELSEED-RLIVARARKIERFFSQ 427

Query: 420 S 420
            
Sbjct: 428 P 428


>gi|904147|gb|AAA74404.1| adenosine triphosphatase [Sinofranchetia chinensis]
          Length = 498

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G ++ I      V     +   + + +V +G+++     D   +V ++  +  V    + 
Sbjct: 21  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQQIDVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             +    G  V   G    +       GR+ N LG+P+D    +    +S  I    P  
Sbjct: 81  ATDGXMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTIS-PIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|63253199|dbj|BAD98373.1| beta subunit of ATP synthesis [Davallia fejeensis]
 gi|63253231|dbj|BAD98397.1| beta subunit of ATP synthesis [Davallia pyxidata]
 gi|63253235|dbj|BAD98400.1| beta subunit of ATP synthesis [Davallia solida]
          Length = 464

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +    + V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RQTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|296282263|ref|ZP_06860261.1| FliI/YscN family ATPase [Citromicrobium bathyomarinum JL354]
          Length = 443

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 144/406 (35%), Positives = 211/406 (51%), Gaps = 6/406 (1%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
            + G +++       V+ L   V +G    +  G    +  + I        +  +G   
Sbjct: 22  RRFGRVAACDGGLIEVSGLG--VPIGSVCSIVHGGGQRHFAEAIGFRNGNTIMMMLGDTV 79

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G +V   GR   +     + GR ++A G+PIDG   +               A++R
Sbjct: 80  LLRPGAMVRPEGRPGMVPVGREFLGRAVDASGQPIDGGGPVL-ARREWPAGGWRTGALDR 138

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
             V + F TGIR ++  T L  GQR+G+ AGSG+GKS L+ M       D +++ L+GER
Sbjct: 139 ASVSQPFDTGIRSLNALTTLGVGQRVGIMAGSGVGKSVLMDMIVGGAEADAIVVGLIGER 198

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            REV +F+     G   +++ +V   +D +  LR    + A +IAE   S+G  VLLILD
Sbjct: 199 AREVSDFVSRHMNGPAGERTAIVAVPADHAANLRLRGAMLATSIAEEMRSQGKKVLLILD 258

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR AH+ REI    GE   ARGYP S  S + +L+ER G S +  G IT + +VL DG
Sbjct: 259 SLTRVAHAAREIGMLLGEPGAARGYPPSALSTITKLIERAGNSAETGGAITGIYTVLADG 318

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ NDP+ D+ RSILDGHIVL+R +A+ GRYP VD  AS+SR+ +               
Sbjct: 319 DDQNDPVVDTARSILDGHIVLSRDIAQRGRYPAVDVGASLSRVMNDIVPPAHVVAARKFR 378

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            L   +EE RD+ L+G YRPG D  LDKA+     +  FL Q  ++
Sbjct: 379 ALNATYEENRDLVLMGAYRPGQDATLDKAIAMHAGMSAFLGQDIAE 424


>gi|194397468|ref|YP_002038137.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae G54]
 gi|226740681|sp|B5E670|ATPB_STRP4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|194357135|gb|ACF55583.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae G54]
          Length = 468

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 10/368 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQSPS 422
            FL Q+ +
Sbjct: 405 FFLSQNXN 412


>gi|61968325|gb|AAX57089.1| ATP synthase beta subunit [Wielandia elegans]
          Length = 479

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+  LA +G YP VDPL S S + 
Sbjct: 304 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSIGLAAKGIYPTVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|34536481|dbj|BAC87674.1| beta subunit of ATP synthase [Hafniomonas laevis]
          Length = 376

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G    +       GR+ N LG+P+D    +   + S+ I   
Sbjct: 1   VSMTSTDGLMRGMEVIDTGNPLSVPVGKATLGRIFNVLGEPVDNMGPVS-AENSLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  SPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLAESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF  +   +VLL +D++ R   +  E++   G +P A GY  ++ +E+  + ERI  
Sbjct: 180 MAEYFRDQNKQDVLLFIDNVFRLVQAGAEVSALLGRMPSAVGYQPTLATEMGAVQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +V + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATVFAHLDATTVLSRNLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGDKHYDCAQSVKRTLQRYKELQDIIAILGLDELSEAD-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|149384387|gb|ABR25016.1| ATP synthase beta chain [Asplenium auritum]
          Length = 426

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G   V   G   +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|157285051|gb|ABV31265.1| ATPase [Vibrio mediterranei]
 gi|157285143|gb|ABV31311.1| ATPase [Vibrio mediterranei]
 gi|157285163|gb|ABV31321.1| ATPase [Vibrio mediterranei]
          Length = 440

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQIGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L       G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTEAFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLSHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|154424909|emb|CAL18557.1| ATP synthase alpha subunit [Streptococcus alactolyticus]
          Length = 367

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 158/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ +          G    +  + V I  +G    I  GD+V   G+  
Sbjct: 1   RARGLDNTMS-GELLEFSNG---AFGMAQNLETNDVGIIILGDFSTIREGDVVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG+P+DG   + K   +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGQPVDGLGDI-KTTATRPVEAPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITAIPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLQENLFNSGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|149384423|gb|ABR25034.1| ATP synthase beta chain [Asplenium sandersonii]
          Length = 426

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G   V   G   +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K   V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAPVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|294085411|ref|YP_003552171.1| F1-ATP synthase subunit beta [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664986|gb|ADE40087.1| F1-ATP Synthase Beta Chain [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 474

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 185/430 (43%), Gaps = 21/430 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G +S +      V        + + +         + +V   +    V    +   E 
Sbjct: 5   SVGKVSQVIGAVVDVVFDGSLPAIQNALEVDNNGQRLVLEVAQHLGESSVRTIAMDATEG 64

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR++N +G+P+D    + K      I    P  +++ 
Sbjct: 65  LVRGAAATDTGAPITVPVGPETLGRILNVIGEPVDEGKPV-KAKKYYPIHRAAPDYVDQS 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 124 TEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 183

Query: 197 ERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +   +        K+ +V    +E P  R    LT +T+AEYF  + 
Sbjct: 184 ERTREGNDLYHEMVESGVIMPDGEGSKAALVYGQMNEPPGARSRVALTGLTLAEYFRDEE 243

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   KG+IT
Sbjct: 244 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSIT 301

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     D
Sbjct: 302 SVQAIYVPADDLTDPAPAASFAHLDATTVLSRQIAELGIYPAVDPLDSSSRMLDPRIVGD 361

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
               +   +  ++ +++  +DI  I G     +      V++   I  FL Q        
Sbjct: 362 HHYSIARQVQEVLQQYKSLQDIIAILGMDELSEED-KLTVYRARKIQRFLSQP---FHVA 417

Query: 428 DVFQEITKKL 437
           +VF     KL
Sbjct: 418 EVFTGAPGKL 427


>gi|112791364|gb|ABI21952.1| ATP synthase beta subunit [Enterobacter cancerogenus]
          Length = 421

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 104/379 (27%), Positives = 175/379 (46%), Gaps = 10/379 (2%)

Query: 48  FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
             V  G     L    ++   +V    +G  + +  G  V        +       GR++
Sbjct: 5   LEVENGAEKLVLEVQQQLGGGLVRCIAMGSSDGLRRGLKVTSLAHPIEVPVGKATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG+P+D    +G+ +    I    P        ++  +TGI+VID+  P   G ++G+
Sbjct: 65  NVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD  + L+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  ++ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSEE 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 362 D-KLVVSRARKIQRFLSQP 379


>gi|308238029|emb|CBK55605.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 419

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 11/387 (2%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPS 98
            Q   + + +V    N     Q  ++   +     +G  E +  G  V   G    +   
Sbjct: 4   GQVPEIMEAIVVDANNLTIEVQA-QLGDGVARGIAMGPSEGLKRGLAVTRTGAPISVPVG 62

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR++N LG+P+DG   +   D    I    P         +  +TGI+VID+  P 
Sbjct: 63  HATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +     + 
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      +   +  S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G     +      V +   I  +L Q 
Sbjct: 360 GMDELSEDD-KLLVSRARKIQRYLSQP 385


>gi|154424931|emb|CAL18568.1| ATP synthase alpha subunit [Streptococcus dysgalactiae subsp.
           equisimilis]
          Length = 367

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFENG---AYGMAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQNMICIYVAIGQKESTVRTQVETLRRYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|317121018|ref|YP_004101021.1| ATP synthase F1 subcomplex subunit beta [Thermaerobacter
           marianensis DSM 12885]
 gi|315590998|gb|ADU50294.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 469

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   + +  G   V   G   +       GR+ N LG+PIDG +   +  
Sbjct: 54  LGNNVVRCVAMASTDGLQRGMPAVDTGGPISVPVGREVLGRMFNVLGEPIDGKEP-PQAK 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   +     +  +TGI+VID+  P   G ++G+F G+G+GK+ ++     
Sbjct: 113 KRYPIHRPAPDVADVNPATEILETGIKVIDLICPFARGGKVGLFGGAGVGKTVIIMELIH 172

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +  +      + + VGER RE  +   +     +  K+ +V    +E P  R    LT +
Sbjct: 173 NIAYKHGGFSVFAGVGERTREGNDLYHELKESGVLDKTALVFGQMNEPPGARLRVGLTGL 232

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
            +AEYF  +   ++LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 233 AMAEYFRDEEGQDLLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGNLQERI- 291

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG+IT+V +V V  D++ DP   +  + LD  + L R++AE G YP VDPLAS S
Sbjct: 292 -TTTRKGSITSVQAVYVPADDYTDPAPVTTFAHLDSTVRLERAIAERGIYPAVDPLASTS 350

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   +  ++ R+++ +DI  I G     +      V +   +  FL
Sbjct: 351 RILDPNIVGQEHYEVARGVQQVLQRYKDLQDIIAILGMDELTEED-KLIVQRARKLERFL 409

Query: 418 KQS 420
            Q 
Sbjct: 410 SQP 412


>gi|306825329|ref|ZP_07458670.1| ATP synthase F1 sector beta subunit [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|306829408|ref|ZP_07462598.1| ATP synthase F1 sector beta subunit [Streptococcus mitis ATCC 6249]
 gi|304428494|gb|EFM31584.1| ATP synthase F1 sector beta subunit [Streptococcus mitis ATCC 6249]
 gi|304432461|gb|EFM35436.1| ATP synthase F1 sector beta subunit [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 468

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID D    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|270292835|ref|ZP_06199046.1| ATP synthase F1, beta subunit [Streptococcus sp. M143]
 gi|270278814|gb|EFA24660.1| ATP synthase F1, beta subunit [Streptococcus sp. M143]
          Length = 468

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID D    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|157285023|gb|ABV31251.1| ATPase [Vibrio aestuarianus]
          Length = 441

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 93/407 (22%), Positives = 174/407 (42%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASAAESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +               G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEHYVDEFTKGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A S   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGAAQSKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    + ++    + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDEATKRQLNHGQKVTELMKQKQ 399


>gi|322833199|ref|YP_004213226.1| flagellar protein export ATPase FliI [Rahnella sp. Y9602]
 gi|321168400|gb|ADW74099.1| flagellar protein export ATPase FliI [Rahnella sp. Y9602]
          Length = 454

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 159/451 (35%), Positives = 239/451 (52%), Gaps = 21/451 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M   L  L +  +D  K +     V + G ++  T +    T L   + LG   + +  +
Sbjct: 1   MTARLSRLLKTLDDAEKRMARTPSVRRYGRLTRATGLVLEATGL--QLPLGATCLIERHD 58

Query: 56  SDNLGQVI----RINLDIVYICPVGIGEEISLGDLVFH-------WGRFRISPSACWCGR 104
              + +V       N   +++ P+   E I  G  V+            ++       GR
Sbjct: 59  GPVVQEVESEVVGFNGQSLFLMPLEEVEGILPGARVYARIAADGQTAGKQLPLGTQLLGR 118

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++   KP+DG      G     +++     + R  +      G+R I+    +  GQR+
Sbjct: 119 VLDGSAKPLDGLPPPDTG-YRAALITPPFNPLQRTPITDVLDVGVRAINALLTVGRGQRM 177

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVAT 223
           G+FAGSG+GKS LL M AR    D +++ L+GERGREV++FIE+ LGD    +SVV+ A 
Sbjct: 178 GLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGDEGRARSVVIAAP 237

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           +D SP+LR      A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP
Sbjct: 238 ADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYP 297

Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
            SVF++LP L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R LA
Sbjct: 298 PSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRRLA 357

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           E G YP +D  AS+SR         +   V +   L+  ++  RD+  +G Y  G D +L
Sbjct: 358 ESGHYPAIDIEASISRAMTSLIDDAQYGRVRNFKQLLSSYQRNRDLISVGAYAAGSDPML 417

Query: 404 DKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433
           D+A+   P + +FL+Q   + S+ ED   E+
Sbjct: 418 DRAIKLYPQMENFLQQDIMERSTYEDACLEL 448


>gi|302747596|gb|ADL63279.1| Atp1 [Pinguicula vulgaris]
          Length = 349

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDTLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQCYSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|225159358|ref|ZP_03725655.1| ATP synthase F1, beta subunit [Opitutaceae bacterium TAV2]
 gi|224802064|gb|EEG20339.1| ATP synthase F1, beta subunit [Opitutaceae bacterium TAV2]
          Length = 476

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 185/429 (43%), Gaps = 29/429 (6%)

Query: 24  GYISSITSVYYTVTCLSQY------VCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVG 76
           G I  +      V                +F V+  K    L +V +   D V     + 
Sbjct: 3   GKIVQVIGAVVDVQFAETAMPPIYQALTVEFEVNAKKERLTL-EVQQHLGDGVLRAIAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G    +       GR+ N  G P+D    + K D    I    P  
Sbjct: 62  SSEGLRRGMPVMDTGAPISVPVGDGVLGRIFNVTGDPVDNKGPV-KFDKKYPIHRPAPSI 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    +  +TGI+V+D+  P   G + G+F G+G+GK+ ++     +         + 
Sbjct: 121 AEQDTKAEILETGIKVLDLICPFTKGGKAGIFGGAGVGKTVVILELINNIAKAHGGYSVF 180

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   +               K  +V    +E P  R    L+A+ + EY
Sbjct: 181 AGVGERSREGNDLYHEMSEAGVINQDDLSKSKVALVYGQMNEPPGARMRVALSALAMTEY 240

Query: 245 FSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF+ +  E++   G  P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDEKNQDVLLFIDNIFRFSQAGSEVSALLGRSPSAVGYQPTLANEMGILQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V +V V  D+  DP   +  + LD  IVL RS+AE G YP VDPLAS S+  D 
Sbjct: 299 KGSITSVQAVYVPADDLTDPAPANTFAHLDSTIVLERSIAELGIYPAVDPLASTSKALDP 358

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           A   +E   +   +  ++ R+++ +DI  I G          + V++   +  FL Q   
Sbjct: 359 AIVGEEHYTVAREVQRVLQRYKDLQDIIAILGLDELS-PEDKQTVYRARKLQRFLSQP-- 415

Query: 423 DLSSEDVFQ 431
             S  +VF 
Sbjct: 416 -FSVAEVFT 423


>gi|170742092|ref|YP_001770747.1| flagellum-specific ATP synthase [Methylobacterium sp. 4-46]
 gi|168196366|gb|ACA18313.1| flagellar protein export ATPase FliI [Methylobacterium sp. 4-46]
          Length = 451

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 166/412 (40%), Positives = 238/412 (57%), Gaps = 8/412 (1%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLG---DFVVH-QGKNSDNLGQVIRINLDIVYICPVGI 77
             G + +I  +   V      + LG   D  V  +G       ++I  +       P G 
Sbjct: 26  VFGRVVAIRGLLVEVAGPVAAMRLGGRLDIAVEGRGGEGSVPCEIIGFSGSHALAMPFGS 85

Query: 78  GEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
            + +  G    V       I PS  W GRV++ALG+P+DG   L  G L   + +  PPA
Sbjct: 86  LQGVRRGCPARVGAEEAGAIRPSPAWLGRVVDALGRPVDGRGPLPPGPLPYPLRADPPPA 145

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
             R RV      G+R I+ F  +C GQR+G+FAGSG+GKS LLSM AR+   D  +I LV
Sbjct: 146 HARARVGPPLDLGVRCINTFLTMCVGQRMGIFAGSGVGKSVLLSMLARAAACDVAVIGLV 205

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GERGREV+EF++D LG + L +SVVVVATSDE  ++R+ A    + +AE F   G  VL 
Sbjct: 206 GERGREVQEFLQDDLGPEGLARSVVVVATSDEPALMRRNAAYVTLALAESFRDAGAQVLC 265

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
           ++DS+TRFA + R++   +GE P A+GY  +VFSELPRLLER GP     G+I+ + +VL
Sbjct: 266 MIDSVTRFAMAQRDVGLAAGEPPTAKGYTPTVFSELPRLLERAGPGTG-AGSISGLFTVL 324

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
           V+GD+HN+P+AD+VR ILDGHIV+ R +AE GRYP ++ L SVSR   +A        V 
Sbjct: 325 VEGDDHNEPVADAVRGILDGHIVMERRIAEGGRYPAINVLRSVSRTMPRACDPAFLPTVQ 384

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
               L+  + +  ++  +G YRPG    +D+A+  +P +  F++Q   + +S
Sbjct: 385 RARWLLSTYADMEELIRLGAYRPGSSPDVDEAIGLMPDLEAFMRQGKEEATS 436


>gi|14717966|gb|AAK72725.1| ATP synthase beta subunit [Borya septentrionalis]
          Length = 483

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    Q   + + +V +G   D +GQ I +  ++        V    
Sbjct: 14  GRIAQIIGPVLDVVFPPGQMPNIYNALVVKG--RDIVGQQINVTCEVQQLLGNNRVRTVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 72  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G Y  VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYSAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|5031145|gb|AAD38083.1|AF093422_1 ATP synthase beta subunit [Tetracentron sinense]
          Length = 498

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 79  MSATDGLTRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVXXX-XXXXIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLXAPYRRGGKXGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|904156|gb|AAA70388.1| adenosine triphosphatase [Stauntonia hexaphylla]
          Length = 498

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVDQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIP 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|328768905|gb|EGF78950.1| hypothetical protein BATDEDRAFT_20257 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 507

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 195/411 (47%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G + S+      V   S  +  + + +  QG +   + +V   +  + V    +   + +
Sbjct: 40  GAVRSVIGAVVDVQFESGNLPPILNALEVQGHSVRLVLEVAQHLGENTVRTIAMDGTDGL 99

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V   G    I       GR++N +G+P+D    + K    + I +  P  +++  
Sbjct: 100 TRGQKVLDTGAPICIPVGPECLGRIMNVIGEPVDERGPI-KTKQLLPIHASPPEFVDQST 158

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
           V +  +TGI+V+D+  P   G +IG+F G+G+GK+ L++    +         +   VGE
Sbjct: 159 VPELLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLITELINNVAKAHGGYSVFCGVGE 218

Query: 198 RGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           R RE  +   + +       +   K+ +V    +E P  R    LT +TIAEYF  +   
Sbjct: 219 RTREGNDLYHEMITAGVIKLEGGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDQEGQ 278

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++ ++ ERI  +  +KG+IT+V
Sbjct: 279 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTKKGSITSV 336

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            ++ V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D     D  
Sbjct: 337 QAIYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRILDPRIVGDHH 396

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + + +  ++  ++  +DI  I G     +      V +   I  F+ Q 
Sbjct: 397 YGIATGVQKILQNYKSLQDIIAILGMDELSEED-KLTVERARKIQRFMSQP 446


>gi|241912834|gb|ACS72095.1| AtpB [Baskervilla colombiana]
          Length = 489

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGTTLGRIFNVIGEPVDNLGPVDICTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|149798657|gb|ABR32019.1| ATP synthase beta chain [Antrophyum latifolium]
          Length = 426

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGVIDTGAPLNVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLITELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTNEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF       +L  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|150187258|emb|CAK30208.1| ATP synthase alpha subunit [Streptococcus orisratti]
          Length = 367

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 153/367 (41%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AYGMAQNLESNDVGIIILGDFSAIREGDEVKRTGKIMEVPVGESL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +     +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGEIVTT-ATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|119350483|gb|ABL63192.1| AtpB [Draparnaldia plumosa]
          Length = 388

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 164/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G D V       +       GR+ N LG+P+D    + + +  + I
Sbjct: 1   VRAVAMNPTEGLMRGMDAVDTGNPLMVPVGKTTLGRIFNVLGEPVDNLGPV-EAEQKLPI 59

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P   +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 60  HRSAPAFTDLDTRLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 119

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 120 HGGVSVFAGVGERTREGNDLYMEMKESGVINESNLSESKVALVYGQMNEPPGARMRVGLT 179

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 180 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 239

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 240 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 297

Query: 357 VSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       DE       +   + R++E +DI  I G     +      V +   I  
Sbjct: 298 TSTMLQPWIVGDEHYGCAQQVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIER 356

Query: 416 FLKQS 420
           FL Q 
Sbjct: 357 FLSQP 361


>gi|149384427|gb|ABR25036.1| ATP synthase beta chain [Asplenium tenerum]
          Length = 426

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G   V   G   +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQDISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|150187224|emb|CAK30200.1| ATP synthase alpha subunit [Streptococcus dysgalactiae subsp.
           dysgalactiae]
          Length = 367

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 156/368 (42%), Gaps = 13/368 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 6   AMSGELLEFENG---AYGMAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 63  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 122 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTI 181

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 182 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 241

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 242 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQI 301

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 302 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 358

Query: 397 PGVDLILD 404
             +D    
Sbjct: 359 SDLDAATQ 366


>gi|7708670|emb|CAB90014.1| ATP synthase beta subunit [Tacca chantieri]
          Length = 490

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K+ D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 49  KSRDTAGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGEVTLGR 108

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 109 IFNVLGEPVDNLGPVD-TRTTFPIHRSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 167

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 168 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 227

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 228 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 287

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 288 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 345

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 346 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYKELQDIIA 405

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 406 ILGLDELSEED-RLTVARARKIERFLSQP 433


>gi|130076678|gb|ABO31959.1| ATPase alpha subunit [Aphanopetalum resinosum]
          Length = 345

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 144/345 (41%), Gaps = 16/345 (4%)

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122
            +  + V I   G    I  GDLV   G     P      GRV++ LG PIDG  +L   
Sbjct: 1   NLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDGLGVPIDGRGALSDH 60

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
           +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +     
Sbjct: 61  E-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 119

Query: 183 RSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPIL 230
            +                 +   +G++   V + ++     N  + S++V AT+ +   L
Sbjct: 120 LNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPL 179

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           + +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF   
Sbjct: 180 QFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLH 239

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  +     + +  I  +V  I DG I L   L   G  
Sbjct: 240 SRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIR 299

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
           P ++   SVSR+   A     K++  S    + ++ E       G
Sbjct: 300 PAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYREVAAFAQFG 344


>gi|69214416|gb|AAZ03788.1| ATP synthase beta chain [Ginkgo biloba]
          Length = 492

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 179/429 (41%), Gaps = 31/429 (7%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI---- 69
           S  +    G I+ I      VT     +       +V   K  D  GQ I +  ++    
Sbjct: 11  STLVEKNVGRIAQIIGPVLDVTFPPGNMPNIFNSLIV---KGQDTAGQEIHVTCEVQQLL 67

Query: 70  ----VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V    +   + +  G  V   G    +       GR+ N LG+P+D    +     
Sbjct: 68  GNNRVRAVAMNATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ART 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 127 TSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 186

Query: 185 DCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKM 233
                  +S+ G   ER RE  +   +               K  +V    +E P  R  
Sbjct: 187 IAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQNISESKVALVYGQMNEPPGARMR 246

Query: 234 APLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LTA+T+AEY       +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  
Sbjct: 247 VGLTALTMAEYSRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGS 306

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VD
Sbjct: 307 LQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVD 364

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S S +        +  +    +     R++E +DI  I G     +      V +  
Sbjct: 365 PLDSTSTMLQPWIVGEEHYETAQGVKQTSQRYKELQDIIAILGLDELSEED-RLTVARAR 423

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 424 KIERFLSQP 432


>gi|319947322|ref|ZP_08021555.1| ATP synthase F1 sector beta subunit [Streptococcus australis ATCC
           700641]
 gi|319746564|gb|EFV98824.1| ATP synthase F1 sector beta subunit [Streptococcus australis ATCC
           700641]
          Length = 468

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 189/410 (46%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICPVGI 77
           G IS +      V   +  +   + + +V    +      V+ + L+    +V    +  
Sbjct: 4   GKISQVVGPVVDVAFAAGDKLPEINNALVVYKNDQQKSKVVLEVALELGDGVVRTIAMES 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + ++ G  V   GR   +       GRV N LG  ID +++  +      I  K P   
Sbjct: 64  TDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEEAFPEDAPRESIHKKAPSFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                E+  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS+  
Sbjct: 124 ELSTSEEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFT 183

Query: 195 -VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF      +
Sbjct: 184 GVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         +  
Sbjct: 302 AIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPDIVGEEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            + S +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 362 AVASEVKRVLQRYHELQDIIAILGMDELSDDE-KTLVARARRIQFFLSQN 410


>gi|34539369|gb|AAQ74568.1| F1-ATPase alpha subunit [Monocostus uniflorus]
          Length = 365

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 86/371 (23%), Positives = 151/371 (40%), Gaps = 20/371 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIGDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL- 214
            +      GK+ +      +               +   +G++   V + ++     N  
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQKRSTVAQLVQILPEANAL 177

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
           + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++    
Sbjct: 178 EYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLR 237

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSIL 332
             P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I 
Sbjct: 238 RPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPIT 297

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392
           DG I     L   G  P ++   SVSR+   A     K++  S    +  + +   +   
Sbjct: 298 DGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAEYRQ---VAAF 354

Query: 393 GGYRPGVDLIL 403
             +   +D   
Sbjct: 355 AQFGSDLDAAT 365


>gi|56751796|ref|YP_172497.1| F0F1 ATP synthase subunit beta [Synechococcus elongatus PCC 6301]
 gi|81301124|ref|YP_401332.1| F0F1 ATP synthase subunit beta [Synechococcus elongatus PCC 7942]
 gi|114569|sp|P07890|ATPB_SYNP6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573769|sp|Q31KS4|ATPB_SYNE7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|48024|emb|CAA29362.1| unnamed protein product [Synechococcus elongatus PCC 6301]
 gi|56686755|dbj|BAD79977.1| ATP synthase beta subunit [Synechococcus elongatus PCC 6301]
 gi|81170005|gb|ABB58345.1| ATP synthase F1, beta subunit [Synechococcus elongatus PCC 7942]
          Length = 484

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 190/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLD-IVYICPVG 76
           GYI  +      V   +  +  + + +V +GKN          +V ++  D  V    + 
Sbjct: 11  GYIRQVIGPVVDVEFPAGKLPQIYNALVIKGKNEAGQDLSVTCEVQQLLGDRKVRAVSMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 71  TTDGLVRGLEVIDTGAPISVPVGEATLGRIFNVLGEPVDELGPVNAATTS-PIHRDAPKL 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            + +   K F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 130 TDLETKPKVFETGIKVIDLLAPYRQGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  +++              K  +V    +E P  R    L+A+T+AE+
Sbjct: 190 GGVGERTREGNDLYQEFKESGVIDEKNIANSKVALVYGQMNEPPGARMRVGLSALTMAEH 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +   
Sbjct: 250 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTL 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 SIVGEEHYRTARAVQSTLQRYKELQDIIAILGLDELSEED-RQTVARARKIEKFLSQP 424


>gi|6467937|gb|AAF13236.1|AF197603_1 ATPase beta subunit [Palmeria scandens]
          Length = 490

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 76

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 77  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSSPAF 135

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 136 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 195

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 196 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMAEY 255

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 256 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 313

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 314 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 373

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 374 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 430


>gi|5758918|gb|AAD50892.1| ATP synthase beta subunit [Tradescantia ohiensis]
          Length = 496

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTADQQINVTCEVQQLLGNNRVRAIAMS 80

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P  
Sbjct: 81  ATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRITSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|150187286|emb|CAK30217.1| ATP synthase alpha subunit [Streptococcus pyogenes]
 gi|154424897|emb|CAL18551.1| ATP synthase alpha subunit [Streptococcus pyogenes]
 gi|154424977|emb|CAL18591.1| ATP synthase alpha subunit [Streptococcus pyogenes]
 gi|154424979|emb|CAL18592.1| ATP synthase alpha subunit [Streptococcus pyogenes]
          Length = 367

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFENG---AYGMAQNLESNDVGIIILGDFSAIREGDVVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|123325725|gb|ABM74487.1| ATP synthase beta subunit [Wenzelia dolichophylla]
          Length = 466

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVIKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKTGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|32815639|gb|AAP88216.1| ATP synthase beta subunit [Ostrya virginiana]
          Length = 457

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 167/389 (42%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIR--------INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I         +  + V    +   + ++ G  V   G    +       GR
Sbjct: 24  KGRDTAGQQINVTWEVQQLLGNNRVKAAAMSATDGLTRGMEVIDTGASLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVN-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF    +  +L  +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNERDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT + +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKSGSITFIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I   L Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERLLSQP 408


>gi|322411477|gb|EFY02385.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 468

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 190/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + ++    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG+ ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTQKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|123325623|gb|ABM74436.1| ATP synthase beta subunit [Citrus junos]
          Length = 461

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLPPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|156118598|gb|ABU49841.1| ATPase beta subunit [Ginkgo biloba]
          Length = 499

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 112/429 (26%), Positives = 179/429 (41%), Gaps = 31/429 (7%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI---- 69
           S  +    G I+ I      VT     +       +V   K  D  GQ I +  ++    
Sbjct: 11  STLVEKNVGRIAQIIGPVLDVTFPPGNMPNIFNSLIV---KGQDTAGQEIHVTCEVQQLL 67

Query: 70  ----VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
               V    +   + +  G  V   G    +       GR+ N LG+P+D    +     
Sbjct: 68  GNNRVRAVAMNATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ART 126

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 127 TSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN 186

Query: 185 DCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKM 233
                  +S+ G   ER RE  +   +               K  +V    +E P  R  
Sbjct: 187 IAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQNISESKVALVYGQMNEPPGARMR 246

Query: 234 APLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LTA+T+AEY       +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  
Sbjct: 247 VGLTALTMAEYSRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGS 306

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VD
Sbjct: 307 LQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVD 364

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S S +        +  +    +     R++E +DI  I G     +      V +  
Sbjct: 365 PLDSTSTMLQPWIVGEEHYETAQGVKQTSQRYKELQDIIAILGLDELSEED-RLTVARAR 423

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 424 KIERFLSQP 432


>gi|114509214|gb|ABI75175.1| ATPase alpha subunit [Najas guadalupensis]
 gi|114509216|gb|ABI75176.1| ATPase alpha subunit [Najas sp. C113]
          Length = 361

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 162/365 (44%), Gaps = 19/365 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V     +S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEL---SSGVKGIALNLENENVGIVIFGSDTAIQEGDLVKRTGSIAD 56

Query: 96  SPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P+     GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGTSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGILERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTIFNQKELNAKAKDNEKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDHGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  SL   + 
Sbjct: 296 AYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKRVRGSLKLELA 355

Query: 382 RFEET 386
           ++ E 
Sbjct: 356 QYREV 360


>gi|34500012|gb|AAQ73588.1| ATP synthase beta subunit [Pasteurella bettyae]
          Length = 444

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 108/407 (26%), Positives = 185/407 (45%), Gaps = 13/407 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +  +   +  + Q +     +V    +G  +
Sbjct: 1   MSAGKIVQIIGAVIDVEFPQDAVPKVYDALKVETGLTLEVQQQLG--GGVVRCIAMGTSD 58

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G+   +       GR++N LG+P+D    +G  +    I    P    +
Sbjct: 59  GLKRGLSVSNTGKAISVPVGTKTLGRIMNVLGEPVDERGPIGAEE-EWAIHRAAPSYEEQ 117

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + + V
Sbjct: 118 SNSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIATEHNGYSVFAGV 177

Query: 196 GERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           GER RE  +F  +    + + K  +V    +E P  R    LT +T+AE F  +G +VL 
Sbjct: 178 GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLF 237

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V +V 
Sbjct: 238 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVY 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D          + 
Sbjct: 296 VPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGXXXLNVA 355

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +      FL Q 
Sbjct: 356 RGVQGILQRYKELKDIIAILGMDELSEND-KLVVARARKXERFLSQP 401


>gi|32490806|ref|NP_871060.1| hypothetical protein WGLp057 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166012|dbj|BAC24203.1| fliI [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 458

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 156/429 (36%), Positives = 236/429 (55%), Gaps = 18/429 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVGI 77
           Q G +   T +      L   + +G     + K  +++     +V+  N   +++ P+  
Sbjct: 27  QYGKLVRATGMVMEAIGL--QLPIGSTCFIEKKEENSITNIECEVVGFNGQNLFLMPLEG 84

Query: 78  GEEISLGDLVFHWG----RFR---ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            + I  G  V        +     +       GRV+N+ GK +D    + K      + +
Sbjct: 85  VDGICPGARVHSQDLYNSKISTRLLPIGYSLLGRVLNSSGKFLD-KLPVPKTYKKKSLYT 143

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           K    + R  ++K    G+R I+    +  GQR+G+F+GSG+GKS LL M A+    D +
Sbjct: 144 KPINPLLRDPIKKVLDVGVRAINGLLTVGIGQRMGIFSGSGVGKSILLGMMAKYTKADII 203

Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ L+GERGREV++FIE+ LG+  + +SVV+ A +D SP+LR    + A  IAEYF  KG
Sbjct: 204 VVGLIGERGREVKDFIENILGEKGISRSVVIAAPADVSPMLRIQGAIYATRIAEYFRDKG 263

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLLI+DS+TR+A + REI+   GE P  +GYP SVF++L  L+ER G     KG+ITA
Sbjct: 264 KHVLLIMDSLTRYAMAQREISLAIGEPPATKGYPPSVFAKLSELVERTGNGTDNKGSITA 323

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL +GD+  DPIADS RSILDGHIVL+R L+E G YP +D  +S+SR      +   
Sbjct: 324 FYTVLTEGDDQQDPIADSSRSILDGHIVLSRFLSESGHYPSIDIESSISRTMSNIVTESH 383

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            K V  +  LI  +++ RD+  +G Y  G D ILD A+   P I  +LKQ   DL+    
Sbjct: 384 FKCVQKVKQLISSYQKNRDLLSVGAYSSGSDPILDIAIKNYPKIEKYLKQ---DLNQSCS 440

Query: 430 FQEITKKLQ 438
           ++E   +L 
Sbjct: 441 YEESCLQLN 449


>gi|150187212|emb|CAK30197.1| ATP synthase alpha subunit [Streptococcus canis]
 gi|154424917|emb|CAL18561.1| ATP synthase alpha subunit [Streptococcus canis]
 gi|154424919|emb|CAL18562.1| ATP synthase alpha subunit [Streptococcus canis]
          Length = 367

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFENG---AYGMAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDTILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|283955273|ref|ZP_06372773.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793187|gb|EFC31956.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           414]
          Length = 465

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 113/409 (27%), Positives = 191/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N  G  ID  + +   D    I    P    
Sbjct: 63  DGLVRGLKVEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISF-DKKWAIHRDPPAFEE 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  + + +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMELDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLVVERARKIEKFLSQP 407


>gi|17224737|gb|AAL37090.1| ATP synthase beta subunit [Dioscorea pentaphylla]
          Length = 477

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 181/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKN-----SDNLGQVIRINLDI-VYICPVG 76
           G I  I   V   +    +   + + +V +G+      +D   +V ++  +  V    + 
Sbjct: 7   GRIVQIIGPVLDVIFPPGKMPNIYNALVVKGRAXXQQINDVTCEVQQLLGNNRVRAVAMS 66

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 67  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 125

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 126 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 185

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 186 GGVGERTREGNDLYIEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 245

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL  D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 246 FRDVNEQDVLLFXDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 303

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 304 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQA 363

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 GIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVXRARKIERFLSQP 420


>gi|7708323|emb|CAB90090.1| ATP synthase beta subunit [Haloragis aspera]
          Length = 466

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 104/388 (26%), Positives = 171/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 28  GPDTAGQQINVTCEVQQLLGNNRVRAIAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRI 87

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +    +S  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 88  FNVLGEPVDNLGPVDTRTIS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 146

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 147 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 206

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
               +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 207 SXVXLVYXQMNEPPGARMRVGXTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 266

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 267 GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 324

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I
Sbjct: 325 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAI 384

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 385 LGLDELSEED-RLTVARARKIERFLSQP 411


>gi|302390542|ref|YP_003826363.1| ATP synthase F1 subcomplex beta subunit [Thermosediminibacter
           oceani DSM 16646]
 gi|302201170|gb|ADL08740.1| ATP synthase F1 subcomplex beta subunit [Thermosediminibacter
           oceani DSM 16646]
          Length = 489

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 111/363 (30%), Positives = 176/363 (48%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V    +   + +  G  V + GR   +       GRV N LG+PID    + +  
Sbjct: 70  LGDDTVRAIAMSSTDGLVRGMKVKNTGRPIEVPVGEGVLGRVFNVLGEPIDDIRGV-EVR 128

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    PP   ++  E+ F+TGI+V+D+  P   G +IG+F G+G+GK+ L+    R
Sbjct: 129 ERWPIHRPAPPFEEQETGEEIFETGIKVLDLLAPYPRGGKIGLFGGAGVGKTVLIMELIR 188

Query: 184 SDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +   +    S+    G   RE    ++       L+K+V+V    +E P  R    LTA+
Sbjct: 189 NIATEHRGYSVFAGVGERTREGNELWLGMKASGVLEKTVLVFGQMNEPPGARMRVALTAL 248

Query: 240 TIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  + G +VLL +D+I R+  +  E++   G +P A GY  ++  ++  L ERI 
Sbjct: 249 TMAEYFRDELGQDVLLFIDNIFRYIQAGSEVSALLGRIPSAVGYQPTLAVDVGMLQERI- 307

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S
Sbjct: 308 -TSTKKGAITSVQAVYVPADDLTDPAPATAFAHLDATTVLSRQVAEMGLYPAVDPLDSTS 366

Query: 359 RLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D     +    +   +  ++ R+ E +DI  I G     +      V +   I  FL
Sbjct: 367 RILDPRIVGEKHYAVAMGVQKILQRYRELQDIIAILGMDELSEED-KLTVSRARKIQRFL 425

Query: 418 KQS 420
            Q 
Sbjct: 426 TQP 428


>gi|17224743|gb|AAL37093.1| ATP synthase beta subunit [Dioscorea communis]
          Length = 483

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 39  KGRXXAGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 98

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 99  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKI 157

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 158 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 217

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 218 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 277

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 278 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 335

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 336 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQKVKQTSQRYKELQDIIA 395

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 396 ILGLDELSEED-RLTVARARKIERFLSQP 423


>gi|21633377|gb|AAM52163.1| ATP synthase beta subunit [Bonamia thunbergiana]
          Length = 490

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 182/416 (43%), Gaps = 23/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL---GQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   +   +V QG++++ +    +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYSALVIQGRDNEQMNVTCEVQQLLGNNRVRAVAMSAT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG P+D   ++     +  I    P  + 
Sbjct: 81  DGLMRGMEVIDTGAPISVPVGGATLGRIFNVLGAPVDNLGAVD-TKTTSPIYRSAPAFIQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGINVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESRVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|55056896|emb|CAF21949.1| ATP synthase beta subunit [Juniperus chinensis]
          Length = 439

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           KN+D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 15  KNNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 74

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P            +TGI+V+D+  P   G +I
Sbjct: 75  IFNVLGEPVDNLGPVDALTTS-PIHRSAPAFTQLDIKFSILETGIKVVDLLAPYRRGGKI 133

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 134 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIS 193

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 194 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 253

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 254 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 311

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 312 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGKEHYETAQGVKQTLQRYKELQDIIA 371

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 372 ILGLDELSEDD-RLIVARARKIERFLSQP 399


>gi|241912890|gb|ACS72123.1| AtpB [Prescottia sp. Hajeckt s.n.]
          Length = 489

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V + +  D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIKSQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPV-HIRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLNVARARKIERFLSQP 426


>gi|63253211|dbj|BAD98382.1| beta subunit of ATP synthesis [Davallia mariesii]
 gi|63253219|dbj|BAD98388.1| beta subunit of ATP synthesis [Davallia mariesii var. stenolepis]
          Length = 464

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 186/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N+     D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNTAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|293365289|ref|ZP_06612006.1| ATP synthase F1 sector beta subunit [Streptococcus oralis ATCC
           35037]
 gi|307703829|ref|ZP_07640770.1| ATP synthase F1, beta subunit [Streptococcus oralis ATCC 35037]
 gi|315613058|ref|ZP_07887969.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis ATCC
           49296]
 gi|322374416|ref|ZP_08048930.1| ATP synthase F1, beta subunit [Streptococcus sp. C300]
 gi|331266489|ref|YP_004326119.1| proton-translocating ATPase, F1 sector,beta-subunit [Streptococcus
           oralis Uo5]
 gi|291316739|gb|EFE57175.1| ATP synthase F1 sector beta subunit [Streptococcus oralis ATCC
           35037]
 gi|307622664|gb|EFO01660.1| ATP synthase F1, beta subunit [Streptococcus oralis ATCC 35037]
 gi|315315168|gb|EFU63209.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis ATCC
           49296]
 gi|321279916|gb|EFX56955.1| ATP synthase F1, beta subunit [Streptococcus sp. C300]
 gi|326683161|emb|CBZ00779.1| proton-translocating ATPase, F1 sector,beta-subunit [Streptococcus
           oralis Uo5]
          Length = 468

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID D    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|91202301|emb|CAJ75361.1| strongly similar to ATPA gene encoding subunit alpha of ATP
           synthase [Candidatus Kuenenia stuttgartiensis]
          Length = 513

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 191/431 (44%), Gaps = 15/431 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           + K  +   Q+ E     L + + G ++ +      V  L   V   + V+  G      
Sbjct: 14  INKAFDAFGQILEKKEYPLEIRETGTVTYVGKGIARVNGL-WNVKSEEMVLFSGS---LP 69

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118
           G V  ++     I  +   ++I  G  V   G+   +       GRVI+A+G+P+D    
Sbjct: 70  GLVFNLDHGEAGIILLDEDDDIKAGGEVQRTGKVIDVPVGKMLLGRVIDAVGRPLDNYGP 129

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           + +      I  + P  ++R  V    +TGI+VID   P+  GQR  +      GK+T+ 
Sbjct: 130 V-RTTHRQIIEREAPAIIDRSPVNIPLQTGIKVIDALIPIGRGQRELILGDRQTGKTTIA 188

Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAP 235
             ++  + D     +   +G+R   V + I D    D L  +++VVA  + +P ++ +AP
Sbjct: 189 LDTIINQKDKGVICVYCAIGQRSSSVAKLIADLRKNDVLDNTIIVVAAGESTPGMKYIAP 248

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A  +AEYF  KG++VL++ D +T  A + RE++      P    +P  +F    RLLE
Sbjct: 249 YAATAMAEYFMYKGEDVLIVYDDLTNHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLE 308

Query: 296 R--IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++T++  +  +  N +  I  ++ SI DG I L+  LA++G  P V+ 
Sbjct: 309 RSTHLKKELGGGSLTSLPIIETEAQNISAYIPTNLISITDGQIYLSPELAQKGIMPAVNV 368

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  KA     + + S L     +FEE         +   +D    K + +   +
Sbjct: 369 GRSVSRVGGKAQFPSYRMVASDLRLSYAQFEELE---RFARFSTRLDESTRKIIERGKRV 425

Query: 414 YDFLKQSPSDL 424
            + LKQ     
Sbjct: 426 REILKQPQFQP 436


>gi|63253143|dbj|BAD98331.1| beta subunit of ATP synthesis [Araiostegia hymenophylloides]
          Length = 464

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|89070092|ref|ZP_01157422.1| ATP synthase subunit B [Oceanicola granulosus HTCC2516]
 gi|89044313|gb|EAR50456.1| ATP synthase subunit B [Oceanicola granulosus HTCC2516]
          Length = 474

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 103/417 (24%), Positives = 181/417 (43%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I+ +      V        + + +         + +V   +  + V    +   E + 
Sbjct: 6   GKITQVIGAVVDVQFDDHLPAILNALTTDNNGKTLVLEVAQHLGENTVRTIAMDATEGLV 65

Query: 83  LGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G +V        +       GR++N +G+P+D    +   D    I +  P    +   
Sbjct: 66  RGGVVTDRGEPISVPVGNATLGRILNVVGEPVDEKGPIS-ADERRPIHAPAPDFAQQSTE 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 AEILVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYYEMIEGGVINPDNLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +    G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTRSGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD    LNR+++E G YP VDPL S SRL D      +
Sbjct: 303 VQAIYVPADDLTDPAPATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRLMDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|16943751|emb|CAD10766.1| atp synthase, beta subunit [Paris tetraphylla]
          Length = 498

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 104/386 (26%), Positives = 170/386 (44%), Gaps = 26/386 (6%)

Query: 57  DNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           D +GQ I +  ++        V    +   + ++ G  V   G    +       GR+ N
Sbjct: 53  DTVGQKINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFN 112

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F
Sbjct: 113 VLGEPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLF 171

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKK 216
            G+G+GK+ L+     +       +S+ G   ER RE  +   +               K
Sbjct: 172 GGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESK 231

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +   ++   G 
Sbjct: 232 VALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSXVSALLGR 291

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD  
Sbjct: 292 MPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 349

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  I G
Sbjct: 350 TVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILG 409

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      V +   I  FL Q 
Sbjct: 410 LDELSEED-RLTVARARKIERFLSQP 434


>gi|6017787|gb|AAF01628.1| ATP synthase beta subunit [Geranium cinereum]
          Length = 489

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      +      +  + + +V QG   D +GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDIXFPKGKMPYIYNALVVQG--RDTVGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID          S  I    P
Sbjct: 70  MSATDGLMRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNXXXXXXXTXS-PIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 DFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYKEMKESGVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 A+  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 367 QPRIVGAEHYETAQRVKQTLQRYKELQDIISILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|261250659|ref|ZP_05943234.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
 gi|260939228|gb|EEX95215.1| ATP synthase beta chain [Vibrio orientalis CIP 102891]
          Length = 467

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 183/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSDVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + +  I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-TYSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNEIALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|221195039|ref|ZP_03568095.1| ATP synthase F1, alpha subunit [Atopobium rimae ATCC 49626]
 gi|221184942|gb|EEE17333.1| ATP synthase F1, alpha subunit [Atopobium rimae ATCC 49626]
          Length = 558

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 171/439 (38%), Gaps = 31/439 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDN 58
           ++K L  +  + +    ++      ++ +      V  L +    G+ +           
Sbjct: 22  LRKRLSEVNSMVDQQEVSV------VTEVADGIARVAGL-RTAMAGELLQFTSSSTGHTV 74

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G    ++   V     G   +I  GD     G    I       GRV+N+LG+PIDG  
Sbjct: 75  YGLAQNLDETEVGAVLFGDVSDIREGDECRTTGHVMDIPVDHDMLGRVVNSLGQPIDGLG 134

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        +  K P  M RQ V +  +TG+  ID   P+  GQR  +      GK+ +
Sbjct: 135 PIHTT-HRRPVEFKAPGIMERQPVNQPVQTGLLAIDAMVPIGRGQRELIIGDRKTGKTAI 193

Query: 178 LSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                 +        I   +G++   V    E      +  K+V+V AT+ +S  ++ +A
Sbjct: 194 AIDAIVNQAKTDMVCIYVAIGQKASTVAAIKESLARHGVLNKTVIVAATAADSAPMQYIA 253

Query: 235 PLTAVTIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGY 282
           P+    I EYF                 +VL++ D +++ A + R+++      P    Y
Sbjct: 254 PMAGAAIGEYFMYNDKEGNPADEKHPGGHVLVVYDDLSKQAVAYRQMSLTLHRPPGREAY 313

Query: 283 PTSVFSELPRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  +F    RLLER        G  ++TA+  +     + +  I  +V SI DG I L  
Sbjct: 314 PGDIFYLHSRLLERACKLSDANGAGSLTALPIIETQEGDVSAYIPTNVISITDGQIYLQS 373

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L  +G+ P VD   SVSR+   A     K++  +L   +  + E +       +   +D
Sbjct: 374 NLFFQGQRPAVDVGISVSRVGGDAQIKAMKQVAGTLRLDLASYREKQ---AFSQFGSDLD 430

Query: 401 LILDKAVHQVPIIYDFLKQ 419
                 ++      + LKQ
Sbjct: 431 ATTQYQLNHGAHTMELLKQ 449


>gi|149384395|gb|ABR25020.1| ATP synthase beta chain [Asplenium formosae]
          Length = 426

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G   V   G   +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQDISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|118917372|dbj|BAF40485.1| ATP synthase beta subunit [Adenolinum lewisii]
          Length = 489

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + ++ +G++S     +   +V ++  +  +    + 
Sbjct: 13  GHIAQIIGPVLDVAFPRGKMPNIYNALLVKGQDSTGPQINVTCEVQQLLGNNRIRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ ID    +     S  I    P  
Sbjct: 73  ATDGLMRGMEVSDTGAPLSVPVGGATLGRIFNVLGEAIDDLGPVDTQTTS-PIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  ++               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYKEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 EIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|89574015|gb|ABD77233.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Mus musculus]
          Length = 445

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 18/407 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDL 86
           ++      V        + + +  QG++S  + +V   +    V    +   E +  G  
Sbjct: 1   AVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTEGLVRGQK 60

Query: 87  VFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G   +I       GR++N +G+PID    + K      I ++ P  +     ++  
Sbjct: 61  VLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFIEMSVEQEIL 119

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202
            TGI+V+D+  P   G +IG+F G+G+G + L+     +         + + VGER RE 
Sbjct: 120 VTGIKVVDLLAPYAKGGKIGLFGGAGVGXTVLIMELINNVAKAHGGYSVFAGVGERTREG 179

Query: 203 REFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
            +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 180 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 240 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   + 
Sbjct: 298 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 403


>gi|296134373|ref|YP_003641620.1| ATP synthase F1, beta subunit [Thermincola sp. JR]
 gi|296032951|gb|ADG83719.1| ATP synthase F1, beta subunit [Thermincola potens JR]
          Length = 474

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 103/363 (28%), Positives = 180/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++     +   + +  G      G    +       GR++N LG  ID    + + D
Sbjct: 56  LGNNMCRCVAMSSTDGLVRGMKAIDTGAPITVPVGRPALGRLMNVLGDSIDHKGPI-ESD 114

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   I    P   +++   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R
Sbjct: 115 VRYPIHRPAPAFEDQETATEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIR 174

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAV 239
           +  ++     + + VGER RE  +   + + G  + K+ +V    +E P  R    LT +
Sbjct: 175 NIAYEHGGFSVFAGVGERTREGNDLYHEMIAGGVIDKTAMVFGQMNEPPGARLRVALTGL 234

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AE+F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 235 TVAEFFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 293

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S
Sbjct: 294 -TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTS 352

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   + +++ R++E +DI  I G     D      V +   I  FL
Sbjct: 353 RVLDPRIVGEEHYRVARDVQNILQRYKELQDIIAILGMDELSDED-KLIVARARKIQRFL 411

Query: 418 KQS 420
            Q 
Sbjct: 412 SQP 414


>gi|260774962|ref|ZP_05883862.1| ATP synthase beta chain [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609052|gb|EEX35211.1| ATP synthase beta chain [Vibrio coralliilyticus ATCC BAA-450]
          Length = 467

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 185/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V    S+   + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + +  I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-TYSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARNVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|110915624|gb|ABH02600.1| ATP synthase beta subunit [Diarrhena obovata]
          Length = 490

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 179/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      VT    +   + + +V Q +++     +   +V ++  +  V    
Sbjct: 11  STGRIDQIIGPVLDVTFPPGKLPYIYNALVVQSRDTADKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDSS-TTFPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER  E  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTXEGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  +  +E+  L ERI    
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTXSTEMGSLQERIA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E  DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGNEHYETAQRVKETLQRYKELXDIXAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|89242534|gb|ABD64625.1| ATPase beta subunit [Lardizabala biternata]
          Length = 436

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGRDTVDQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGGATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 63  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIP 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|20467405|gb|AAL27833.1| ATPase beta subunit [Thujopsis dolabrata]
          Length = 452

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 173/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K++D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 21  KDNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 80

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 81  IFNVLGEPVDNLGPVDALTTS-PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKI 139

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 140 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIS 199

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 200 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 259

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 260 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 317

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 318 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIA 377

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 378 ILGLDELSEDD-RLIVARARKIERFLSQP 405


>gi|17224725|gb|AAL37084.1| ATP synthase beta subunit [Dioscorea dumetorum]
          Length = 466

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLRPGIVGEEHYETAQKVKQTSQRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|302747428|gb|ADL63195.1| Atp1 [Desfontainia spinosa]
          Length = 349

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQ 349


>gi|154424913|emb|CAL18559.1| ATP synthase alpha subunit [Streptococcus anginosus]
          Length = 367

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 162/375 (43%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ ++ +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGLDNAMS-GELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ LG+P+DG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVDPLGRPVDGLGEI-KTDKTRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYSGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLSDSLFNAGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|289550281|ref|YP_003471185.1| ATP synthase beta chain [Staphylococcus lugdunensis HKU09-01]
 gi|315660259|ref|ZP_07913114.1| ATP synthase F1 sector beta subunit [Staphylococcus lugdunensis
           M23590]
 gi|289179813|gb|ADC87058.1| ATP synthase beta chain [Staphylococcus lugdunensis HKU09-01]
 gi|315494686|gb|EFU83026.1| ATP synthase F1 sector beta subunit [Staphylococcus lugdunensis
           M23590]
          Length = 470

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC------LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77
           G ++ +      V      V       + +        S  L   +++  D+V    +  
Sbjct: 4   GRVTQVMGPVIDVRFEHNEVPEINNALIVEIPKSDTTISLTLEVALQLGDDVVRTIAMDS 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V + G+   +       GRV N LG+ ID ++ L        I    P   
Sbjct: 64  TDGVQRGMEVQNTGKDISVPVGDETLGRVFNVLGESIDLEEKLDDSVRRDPIHRLAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +  +TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +     + +
Sbjct: 124 ELSTEVEILETGIKVVDLLAPYIKGGKVGLFGGAGVGKTVLIQELINNIAQEHGGISVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      +KK+ +V    +E P  R    L+A+T+AEYF  +   +
Sbjct: 184 GVGERTREGNDLYYEMSDSGVIKKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG++T++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370
           +V V  D++ DP   +  + LD    L R L E G YP VDPLAS SR L       +  
Sbjct: 302 AVFVPADDYTDPAPATAFAHLDSTTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   + ++ E +DI  I G     +    + V +   I  FL Q+
Sbjct: 362 DVARQVQSTLQKYRELQDIIAILGMDELSEED-KQTVERARRIQFFLSQN 410


>gi|63253139|dbj|BAD98328.1| beta subunit of ATP synthesis [Araiostegia faberiana]
 gi|63253147|dbj|BAD98334.1| beta subunit of ATP synthesis [Araiostegia parvipinnula]
 gi|63253151|dbj|BAD98337.1| beta subunit of ATP synthesis [Araiostegia perdurans]
          Length = 464

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVKKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+PID    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPIDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|254553613|gb|ACT67265.1| ATP synthase CF1 beta subunit [Joinvillea plicata]
          Length = 491

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 112/423 (26%), Positives = 180/423 (42%), Gaps = 31/423 (7%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCL--GDFVVHQGKNSDNLGQVIRINLDI--------VY 71
             G I  I      VT     +       VV   K+ D  G+ I +  ++        V 
Sbjct: 13  STGXIDQIIGPVLDVTFPQGKLPYIYNALVV---KSRDTAGKQINVTCEVQQLLGNNRVR 69

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I  
Sbjct: 70  AVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHR 128

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 129 SAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHG 188

Query: 191 IISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAV 239
            +S+ G   ER RE  +  ++               K  +V    +E P  R    LTA+
Sbjct: 189 GVSVFGGVGERTREGNDLYKEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTAL 248

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 249 TMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI- 307

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S
Sbjct: 308 -TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGXYPAVDPLDSTS 366

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
            +        +  +    +   + R++E +DI    G     +      V +   I  F 
Sbjct: 367 TMLQPRIVGEEHYEXAQRVKQTLXRYKELQDIIAXLGXXELSEED-RLTVARARKIERFX 425

Query: 418 KQS 420
            Q 
Sbjct: 426 SQP 428


>gi|302747432|gb|ADL63197.1| Atp1 [Diospyros virginiana]
          Length = 349

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGD 212
            +      GK+ +      +                 +   +G++   V + ++    G+
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEGN 177

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQ 349


>gi|228017396|gb|ACP52213.1| ATP synthase CF1 beta subunit [Larix occidentalis]
          Length = 487

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GK      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 54  GKEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 113

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 114 EPVDNLGPVD-ARITSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 172

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 173 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQSISESKVAL 232

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 233 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 292

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +  D   V 
Sbjct: 293 AVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHSDATTVP 350

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I G   
Sbjct: 351 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYEIAQGVKQTLQRYKELQDIIAIPGLDE 410

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 411 LSEED-RLIVARARKIERFLSQP 432


>gi|30410813|ref|NP_660429.2| flagellum-specific ATP synthase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 455

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 160/457 (35%), Positives = 242/457 (52%), Gaps = 26/457 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV----VH 51
           M+     L      + K +     +   G + S+  +   V  L+    +G       + 
Sbjct: 3   MKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLT--APIGSRCYVERII 60

Query: 52  QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWC 102
            GK  +   +V+    +   +  +     +  G  VF           G+     S    
Sbjct: 61  DGKILNISAEVVGFKKEKTLLFSLEETYGVFPGTRVFLKCFKNTYSITGKI--PLSTELL 118

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+++ G+P+DG   L     +  + S V   +NR+ + +   TGIR I+    +  GQ
Sbjct: 119 GRVLDSKGRPLDGRSQLNPKFFTF-LKSNVVNPLNRKPITEVLDTGIRAINALITVGRGQ 177

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+F+ SG+GKS LL M A+    D VII L+GERGREV++FIE+ LG + L +SVV+ 
Sbjct: 178 RIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIA 237

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+L+  A   A +IAEYF  K  +VLLI+DS+TR+A + R ++ + GELPV++G
Sbjct: 238 APADVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKG 297

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD-NHNDPIADSVRSILDGHIVLNR 340
           YP+SVFS++P L+ER G ++   G+IT+  +VL + + +  DPIA   RSILDGHIVL+R
Sbjct: 298 YPSSVFSKIPILVERTGNTDNY-GSITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSR 356

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
             AE G YP +D   S+SR+     S  +         LI  ++  RD+  IG Y  G D
Sbjct: 357 HYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLINIGAYLKGTD 416

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             LD A+   PI+  FL+Q  S+ SS     E   ++
Sbjct: 417 STLDHAIKIWPILERFLQQKQSEKSSYLSSCEELNQI 453


>gi|25008474|sp|Q8KA42|FLII_BUCAP RecName: Full=Flagellum-specific ATP synthase
 gi|21622966|gb|AAM67640.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 466

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 160/457 (35%), Positives = 242/457 (52%), Gaps = 26/457 (5%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV----VH 51
           M+     L      + K +     +   G + S+  +   V  L+    +G       + 
Sbjct: 14  MKLRFSELLNNISSFEKKVNNLSDIFSYGCLISVNGLLLEVIGLT--APIGSRCYVERII 71

Query: 52  QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH---------WGRFRISPSACWC 102
            GK  +   +V+    +   +  +     +  G  VF           G+     S    
Sbjct: 72  DGKILNISAEVVGFKKEKTLLFSLEETYGVFPGTRVFLKCFKNTYSITGKI--PLSTELL 129

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+++ G+P+DG   L     +  + S V   +NR+ + +   TGIR I+    +  GQ
Sbjct: 130 GRVLDSKGRPLDGRSQLNPKFFTF-LKSNVVNPLNRKPITEVLDTGIRAINALITVGRGQ 188

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           RIG+F+ SG+GKS LL M A+    D VII L+GERGREV++FIE+ LG + L +SVV+ 
Sbjct: 189 RIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSNGLSRSVVIA 248

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A +D SP+L+  A   A +IAEYF  K  +VLLI+DS+TR+A + R ++ + GELPV++G
Sbjct: 249 APADVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLSLGELPVSKG 308

Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD-NHNDPIADSVRSILDGHIVLNR 340
           YP+SVFS++P L+ER G ++   G+IT+  +VL + + +  DPIA   RSILDGHIVL+R
Sbjct: 309 YPSSVFSKIPILVERTGNTDNY-GSITSFYTVLTESEEDPQDPIAHICRSILDGHIVLSR 367

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
             AE G YP +D   S+SR+     S  +         LI  ++  RD+  IG Y  G D
Sbjct: 368 HYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLINIGAYLKGTD 427

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             LD A+   PI+  FL+Q  S+ SS     E   ++
Sbjct: 428 STLDHAIKIWPILERFLQQKQSEKSSYLSSCEELNQI 464


>gi|116493065|ref|YP_804800.1| F0F1 ATP synthase subunit beta [Pediococcus pentosaceus ATCC 25745]
 gi|122265471|sp|Q03EL4|ATPB_PEDPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116103215|gb|ABJ68358.1| ATP synthase F1 subcomplex beta subunit [Pediococcus pentosaceus
           ATCC 25745]
          Length = 469

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 114/424 (26%), Positives = 194/424 (45%), Gaps = 17/424 (4%)

Query: 21  VQGGYISSITSVYYTVTCL--SQYVCLGD-FVVHQGKNSDNLGQV-IRINLDIVYICPVG 76
           +  G +  +      V      +   + +   + +   +  + +V + +   +V    + 
Sbjct: 1   MSTGKVVQVIGPVIDVEFPLDEELPTINNALKIKKADGTVLVSEVTLELGDGVVRTIAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G   ++       GRV N LG  IDG   LG       I    P  
Sbjct: 61  GTDGLQRGLDVEDTGDSIKVPVGKETLGRVFNVLGDTIDGGKELGPDIKRDPIHRDPPDY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   IS+ 
Sbjct: 121 DELNPSTEVLETGIKVIDLLAPYIRGGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +  G  + +++ +V    +E P  R    LT +TIAE+F      
Sbjct: 181 TGVGERTREGNDLYFEMKGSGVLERTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVEGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D++ DP   +  + LD    L R+L ++G YP VDPLAS S   D      + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERALTQQGIYPAVDPLASTSTALDPQIVGEEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++ + + H++ R++E +DI  I G     D      V +   I  FL Q   D S    
Sbjct: 359 YEVATEVQHVLQRYKELQDIISILGMDELSDEE-KTVVARARRIQLFLSQ---DFSVAAQ 414

Query: 430 FQEI 433
           F  +
Sbjct: 415 FTGL 418


>gi|67906678|gb|AAY82766.1| predicted F0F1-type ATP synthase beta subunit [uncultured bacterium
           eBACred22E04]
          Length = 459

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 191/406 (47%), Gaps = 10/406 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           ++ G +  I      V      +      +   ++   L    +I   IV    +G  + 
Sbjct: 1   METGKVVEIIGAVIDVQFARDSMPKVFDALKVDESGLTLEVQQQIGDGIVRTIAMGSTDG 60

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR++N LG+P+D    + K + +M I    P    + 
Sbjct: 61  LKRGLSVNNTGAPINVPVGEKTLGRIMNVLGEPVDNAGDI-KAEKTMPIHRAAPTFSEQA 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L    R+   +     + + VG
Sbjct: 120 SEVEILETGIKVVDLICPFAKGSKVGLFGGAGVGKTVILMELIRNIAAEHSGFSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  +      + K  +V    +E P  R    LT +T+AE+F  +G + LL 
Sbjct: 180 ERTREGNDFFHEMTDAKVIDKVALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGSDTLLF 239

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V V
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYV 297

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD  +VL+R++AE G YP VDPL S SR  D      +      
Sbjct: 298 PADDLTDPSPATTFAHLDATVVLSRNIAELGIYPAVDPLDSTSRQLDPLIIGQEHYDTTR 357

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ +++E +DI  I G     +     AV++   I  +L Q 
Sbjct: 358 AVQGVLQKYKELKDIIAILGMDELSEDD-KLAVNRARKIQRYLSQP 402


>gi|37543313|gb|AAL92721.1| ATP synthase beta subunit [Coleochaete pulvinata]
          Length = 399

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVDST- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGKEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|189017716|gb|ACD71527.1| F1-ATPase alpha subunit [Gymnosiphon breviflorus]
          Length = 352

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 16/349 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +
Sbjct: 4   GIALNLENENVRIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
                +                 +   +G++   V + ++     N  + S++V AT+ +
Sbjct: 123 IDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASD 182

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 183 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 242

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G+ TA+  +     + +  I  +V SI DG I     L  
Sbjct: 243 FYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICSETELFY 302

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            G  P ++   SVSR+   A     K++  S    + ++ E       G
Sbjct: 303 RGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYREVAAFAQFG 351


>gi|172037726|ref|YP_001804227.1| F0F1 ATP synthase subunit beta [Cyanothece sp. ATCC 51142]
 gi|171699180|gb|ACB52161.1| ATP synthase F1, beta subunit [Cyanothece sp. ATCC 51142]
          Length = 483

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 189/421 (44%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
              G I+ +          S  +  + + +  +GKNS         +V ++  D  V   
Sbjct: 8   TSVGKITQVIGPVVDAEFPSGKLPRIYNALKIEGKNSAGDTVSVTCEVQQLLGDNQVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  +   G    +       GR+ N LG+P+D    +G  + S  I    
Sbjct: 68  AMSGTDGLVRGMDIVDTGAPISVPVGKATLGRIFNVLGEPVDEMGDVG-NEESSPIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P         K F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +
Sbjct: 127 PKLTELSTKPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   + +             K  +V    +E P  R    L+A+T+
Sbjct: 187 SVFGGVGERTREGNDLYNEMIESKVINPDNLSESKIALVYGQMNEPPGARMRVGLSALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LDG  VL+R+LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +      ++   + R++E +DI  I G     +    + V +   I  FL Q
Sbjct: 365 LQPNIVGQEHYDTARAVQSTLQRYKELQDIIAILGLDELSEED-RRTVDRARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|154424927|emb|CAL18566.1| ATP synthase alpha subunit [Streptococcus dysgalactiae subsp.
           dysgalactiae]
 gi|154424929|emb|CAL18567.1| ATP synthase alpha subunit [Streptococcus dysgalactiae subsp.
           dysgalactiae]
          Length = 367

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFENG---AYGMAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|37544933|gb|AAN07065.1| ATP synthase beta subunit [Trimenia moorei]
          Length = 427

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 166/367 (45%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +  +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIQLETKLLIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        D  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPEIVGTDHYETAQRIKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|15901355|ref|NP_345959.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae TIGR4]
 gi|15903403|ref|NP_358953.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae R6]
 gi|111657410|ref|ZP_01408163.1| hypothetical protein SpneT_02001380 [Streptococcus pneumoniae
           TIGR4]
 gi|116516544|ref|YP_816797.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae D39]
 gi|148984851|ref|ZP_01818104.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP3-BS71]
 gi|149007587|ref|ZP_01831222.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP18-BS74]
 gi|149021774|ref|ZP_01835781.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP23-BS72]
 gi|168487559|ref|ZP_02712067.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1087-00]
 gi|168575963|ref|ZP_02721878.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae MLV-016]
 gi|169833283|ref|YP_001694914.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           Hungary19A-6]
 gi|221232220|ref|YP_002511373.1| ATP synthase beta chain [Streptococcus pneumoniae ATCC 700669]
 gi|307127712|ref|YP_003879743.1| ATP synthase F1 subunit beta [Streptococcus pneumoniae 670-6B]
 gi|81588075|sp|Q8DP44|ATPB_STRR6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81854993|sp|Q97PT6|ATPB_STRPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122277705|sp|Q04HT9|ATPB_STRP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740682|sp|B1ICS9|ATPB_STRPI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808166|sp|B8ZLA9|ATPB_STRPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|14972998|gb|AAK75599.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae TIGR4]
 gi|15459007|gb|AAL00164.1| Proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus
           pneumoniae R6]
 gi|116077120|gb|ABJ54840.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae D39]
 gi|147760946|gb|EDK67916.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP18-BS74]
 gi|147922873|gb|EDK73989.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP3-BS71]
 gi|147930010|gb|EDK80997.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP23-BS72]
 gi|168995785|gb|ACA36397.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae
           Hungary19A-6]
 gi|183569628|gb|EDT90156.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1087-00]
 gi|183578206|gb|EDT98734.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae MLV-016]
 gi|220674681|emb|CAR69254.1| ATP synthase beta chain [Streptococcus pneumoniae ATCC 700669]
 gi|301800344|emb|CBW32973.1| ATP synthase beta chain [Streptococcus pneumoniae OXC141]
 gi|306484774|gb|ADM91643.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae 670-6B]
 gi|332073842|gb|EGI84320.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA41301]
 gi|332074258|gb|EGI84735.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA17545]
 gi|332199551|gb|EGJ13626.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA41317]
          Length = 468

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|319785938|ref|YP_004145413.1| ATP synthase F1 subunit beta [Pseudoxanthomonas suwonensis 11-1]
 gi|317464450|gb|ADV26182.1| ATP synthase F1, beta subunit [Pseudoxanthomonas suwonensis 11-1]
          Length = 465

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 183/413 (44%), Gaps = 18/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V      V  + D +   G       Q  ++   IV    +G  +
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRAEVPKVYDALKVDGTAITLEVQ-QQLGDGIVRTIALGSTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +    +  + GR   +   A   GR+++ LG  ID    +   D   EI    P   ++
Sbjct: 60  GLKRNLVATNTGRAISVPVGAGTLGRIMDVLGNAIDEAGPVQASD-HWEIHRAAPSYEDQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 SSATELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT
Sbjct: 239 GKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           ++ +V V  D+  DP   +  + LD  +VL+R++A  G YP VDPL S SR  D      
Sbjct: 297 SIQAVYVPADDLTDPSPATTFAHLDATVVLSRNIAALGIYPAVDPLDSTSRQLDPNVIGH 356

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +   + +++E +DI  I G     +     AV +   I  F  Q 
Sbjct: 357 EHYDTARRVQATLQKYKELKDIIAILGMDELSEED-KLAVSRARKIERFFSQP 408


>gi|21633455|gb|AAM52202.1| ATP synthase beta subunit [Cuscuta europaea]
          Length = 448

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG P+D    +    
Sbjct: 25  LGNNRVRAVAMSDTDGLMRGMEVIDTGAPISVPVGGSTLGRIFNVLGHPVDNLGPVNTNK 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  KS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRCGGKIGLFGGAGVGKTVLIMELIN 143

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 144 NIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINDQNIAESKVALVYGQMNEPPGARM 203

Query: 233 MAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 204 RVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 263

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 264 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 321

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 322 DPLDSTSMMLQPRIIGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLNVARA 380

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 381 RKIERFLSQP 390


>gi|123325603|gb|ABM74426.1| ATP synthase beta subunit [Citrus aurantium]
          Length = 466

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 150 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLS 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 210 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLXIDNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|328954797|ref|YP_004372130.1| ATP synthase F1 subcomplex alpha subunit [Coriobacterium glomerans
           PW2]
 gi|328455121|gb|AEB06315.1| ATP synthase F1 subcomplex alpha subunit [Coriobacterium glomerans
           PW2]
          Length = 570

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 104/457 (22%), Positives = 181/457 (39%), Gaps = 33/457 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDN 58
           + + L+TL    +    ++      +  +      V+ L +    G+ +  +        
Sbjct: 29  LSERLDTLTAAVDTQEVSV------VDEVGDGIARVSGL-RSAMSGELLEFKSDETGQTV 81

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117
            G    ++ + V     G    I  GD     GR   I       GRV+N+LG+PIDG  
Sbjct: 82  FGLAQNLDRNEVGAVLFGEVSLIREGDECRTTGRIMDIPVGRSMLGRVVNSLGQPIDGGP 141

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +        I  K P  + R  V +  +TG+  ID   P+  GQR  +      GK+++
Sbjct: 142 DIVTT-HRRPIEFKAPGVIARTPVSEPVQTGLLAIDSMIPIGRGQRELIIGDRKTGKTSI 200

Query: 178 LSMFARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
                 +        I   +G++   V          D L  +V+V AT+ +S  ++ +A
Sbjct: 201 AVDAIINQRGKDMICIYVAIGQKASTVANIRATLAAHDALDYTVIVSATAADSAPMQYIA 260

Query: 235 PLTAVTIAEYFSSKGD------------NVLLILDSITRFAHSIREIATNSGELPVARGY 282
           P+    I E+F   G+            +VL+I D +++ A + R+++      P    Y
Sbjct: 261 PMAGAAIGEFFMYNGEDDRPASADNHGGHVLIIYDDLSKQAVAYRQMSLTLRRPPGREAY 320

Query: 283 PTSVFSELPRLLERIGPSEKEKGN--ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  +F    RLLER     +E G   +TA+  +     + +  I  +V SI DG I L  
Sbjct: 321 PGDIFYLHSRLLERACKLSEENGFGSMTALPLIETQDGDVSAYIPTNVISITDGQIYLQS 380

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L  +G+ P VD   SVSR+   A +   K++  SL   +  +   +++     +   +D
Sbjct: 381 ELFHQGQRPAVDVGISVSRVGGAAQTKAMKQVSGSLRLDLASY---QELAGFAQFGSDLD 437

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
               K +     + + LKQ        DV  +I    
Sbjct: 438 SATQKQLTHGSHMTELLKQPRFKPL--DVVDQIAALF 472


>gi|325915883|ref|ZP_08178179.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537850|gb|EGD09550.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 468

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/412 (25%), Positives = 178/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFQRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRTAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL-- 253
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239

Query: 254 ----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
               L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGTE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|213852796|ref|ZP_03382328.1| F0F1 ATP synthase subunit alpha [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 409

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 172/408 (42%), Gaps = 27/408 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           MQ N   +++L +       V       G I S++     +  L+     G+ +   G  
Sbjct: 1   MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLAD-CMQGEMISLPG-- 57

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
            +     + +  D V    +G   +++ G  V   GR   +       GRV+N LG PID
Sbjct: 58  -NRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   +     S  + +  P  ++RQ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 117 GKGPVDNDGFSA-VEAIAPGVIDRQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGK 175

Query: 175 STLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + L      +  D   K I   +G++   +   +           ++VVVAT+ ES  L+
Sbjct: 176 TALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     + EYF  +G++ L+I D +++ A + R+I+      P    +P  VF    
Sbjct: 236 YLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHS 295

Query: 292 RLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER                   + G++TA+  +     + +  +  +V SI DG I L
Sbjct: 296 RLLERAARVNADYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 355

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
             +L   G  P V+P  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 356 ESNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYREL 403


>gi|112791412|gb|ABI21976.1| ATP synthase beta subunit [Erwinia mallotivora]
          Length = 420

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/379 (27%), Positives = 182/379 (48%), Gaps = 11/379 (2%)

Query: 49  VVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVI 106
           +  Q  ++  + +V + +   +V    +G  + +  G +         +       GR++
Sbjct: 5   LEVQNGDARLVLEVQQQLGGGVVRTIAMGSSDGLKRGLVATDLEHPIEVPVGTATLGRIM 64

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N LG+PID    +G+ +    I    P   ++   ++  +TGI+VID+  P   G ++G+
Sbjct: 65  NVLGEPIDMKGDIGEEE-RWAIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGL 123

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222
           F G+G+GK+  +    R+   +     + + VGER RE  +F  +    N + K  +V  
Sbjct: 124 FGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYG 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
             +E P  R    LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY
Sbjct: 184 QMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGY 243

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++  E+  L ERI  +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +
Sbjct: 244 QPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQI 301

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A  G YP VDPL S SR  D      +   +   +  L+ R++E +DI  I G     + 
Sbjct: 302 ASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDIIAILGMDELSEE 361

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   +  FL Q 
Sbjct: 362 D-KLVVARSRKMQRFLSQP 379


>gi|34500020|gb|AAQ73592.1| ATP synthase beta subunit [Actinobacillus delphinicola]
          Length = 444

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN----LDIVYICPVG 76
           +  G I  I      V      V      V      +  G ++ +        V    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVFDALKVET-GLILEVEQQLGGGAVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+PID    +G  +    I    P  
Sbjct: 56  TSDGLKRGLSVENLGHPISVPVGTKTLGRIMNVLGQPIDQKGPIGAEE-EWSIHRAAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EDQANSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +     +  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMTDSKVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTLAGTEVSALLGRMPSAGGYQPTLAEEMGGLQERI--TSTKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G  P VDPL S SR  D      +  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGILPAVDPLDSTSRQLDPLVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 353 DVARGVQGMLQRYKELKDIIAILGMDELSEED-KLVVARARKVERFLSQP 401


>gi|904109|gb|AAA70371.1| adenosine triphosphatase [Holboellia latifolia]
          Length = 498

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 50  KGRDTVDQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGGATLGR 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIP 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEDD-RLTVARARKIERFLSQP 434


>gi|15616638|ref|NP_239850.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681397|ref|YP_002467782.1| ATP synthase subunit B [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219681953|ref|YP_002468337.1| ATP synthase subunit B [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471070|ref|ZP_05635069.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11131216|sp|P57124|ATPB_BUCAI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808135|sp|B8D8H3|ATPB_BUCA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808136|sp|B8D6S7|ATPB_BUCAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|25290462|pir||H84930 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain
           [imported] - Buchnera sp. (strain APS)
 gi|10038701|dbj|BAB12736.1| ATP synthase beta chain [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621686|gb|ACL29842.1| ATP synthase subunit B [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624240|gb|ACL30395.1| ATP synthase subunit B [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311085758|gb|ADP65840.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086335|gb|ADP66416.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311086910|gb|ADP66990.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087501|gb|ADP67580.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 465

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 112/412 (27%), Positives = 185/412 (44%), Gaps = 15/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + + +  + K    + +V + +   +V    +G  
Sbjct: 1   MATGKIIQIIGAVVDVEFNQDSVPKIYNALEVKNKQYKLILEVQQQLGSGVVRTIAMGSS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD----LSMEIMSKVP 133
             +  G +V   G   ++       GR+IN LG+ ID   +L           EI    P
Sbjct: 61  NGLKRGLIVTDLGHYIKVPVGEATLGRIINVLGETIDNKGALKNNQSDKIEYWEIHRSPP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
              ++    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +    S
Sbjct: 121 SYRDQASCREILETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYS 180

Query: 194 L---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +F  +     +  K  +V    +E P  R     T +TIAE F  +G
Sbjct: 181 VFTGVGERTREGNDFYHEMNDSQVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRDEG 240

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 241 KDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTKNGSITS 298

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           V +V V  D+  DP   +  + LD  + L+R +A  G YP +DPL S SR  D     D 
Sbjct: 299 VQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAIDPLNSTSRQLDPYIVGDE 358

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 HYETALGVQSILQRYQELKDIIAILGMDELAEKD-KLLVSRARKIQRFLSQP 409


>gi|282899706|ref|ZP_06307670.1| ATP synthase F1, beta subunit [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195585|gb|EFA70518.1| ATP synthase F1, beta subunit [Cylindrospermopsis raciborskii
           CS-505]
          Length = 482

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ +      V      +  + + +  +G N    GQ I + +++        V    
Sbjct: 11  GYITQVIGPVVDVKYPGGKLPQIYNALTIKGTNEA--GQEINLTVEVQQLLGDNQVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +   + ++ I  + P
Sbjct: 69  MSTTDGLVRGLEVVDTGAPISVPVGKATLGRIFNVLGEPVDNQGPVN-NEETLPIHRESP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              + +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +         
Sbjct: 128 KLTDLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 188 VFAGVGERTREGNDLYNEMIESGVINKENLNESKIALVYGQMNEPPGARMRVGLSGLTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 248 EYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S + 
Sbjct: 306 TTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   +  S+   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPSIVGKEHYDIARSVQSTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 424


>gi|63253155|dbj|BAD98340.1| beta subunit of ATP synthesis [Araiostegia pulchra]
          Length = 464

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 191/433 (44%), Gaps = 25/433 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQV 62
           ++L+ + S+ +    GYI+ I      V +   +   + + +V +G+N+     D   +V
Sbjct: 4   SRLSFEISELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNTAGQQIDVTCEV 63

Query: 63  IRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            ++  +  V    +   + +  G      G    +       GR+ N LG+P+D    + 
Sbjct: 64  QQLLGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQ 123

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G  +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +  
Sbjct: 124 SG-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIME 182

Query: 181 FARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPI 229
              +       +S+ G   ER RE  +   +               K  +V    +E P 
Sbjct: 183 SINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPG 242

Query: 230 LRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 243 ARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGT 302

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G Y
Sbjct: 303 EMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIY 360

Query: 349 PPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P VDPL S S +        +  +    +   + R++E +DI  I G     +      V
Sbjct: 361 PAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTV 419

Query: 408 HQVPIIYDFLKQS 420
            +   I  FL Q 
Sbjct: 420 ARARKIERFLSQP 432


>gi|5758883|gb|AAD50857.1| ATP synthase beta subunit [Gymnostachys anceps]
          Length = 493

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 30/419 (7%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVGERGREVRE--FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           + G  G   RE     +               K  +V    +E P  R    LTA+T+AE
Sbjct: 198 VFGGVGERTREGKLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAE 257

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +        G +P A GY  ++ +E+  L ERI  +  
Sbjct: 258 YFRDVNEQDVLLFIDNIFRFVQAGS--DALLGRMPSAVGYQPTLSTEMGTLQERI--TST 313

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 314 KEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ 373

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 PRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|163745700|ref|ZP_02153060.1| F0F1 ATP synthase subunit beta [Oceanibulbus indolifex HEL-45]
 gi|161382518|gb|EDQ06927.1| F0F1 ATP synthase subunit beta [Oceanibulbus indolifex HEL-45]
          Length = 474

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 186/422 (44%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V        + + +  Q +    + +V   +  + V    +  
Sbjct: 1   MANAVGKITQVIGAVVDVQFEGDLPEILNALHTQNQGKTLVLEVAQHLGENTVRAIAMDA 60

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G + R+       GR++N  G  +D    +   + +  I    P   
Sbjct: 61  TEGLVRGQAVNDTGDQIRVPVGTATLGRIMNVTGDAVDEKGPVN-SEATRAIHGDAPEFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 EQSTETQILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGLSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +             K  +V    +E P  R    LT +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMIESGVIVPDNLVESKIALVYGQMNEPPGARMRIALTGLTLAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI     + 
Sbjct: 240 RDESGSDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGVMQERIA--STKS 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D  
Sbjct: 298 GSITSVQAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPL 357

Query: 365 WSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              D   K+ + +  ++ R++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 358 IIGDEHYKVATDVQQVLQRYKSLQDIIAILGMDELSEED-KLTVARARKIERFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|56236586|gb|AAV84660.1| ATP synthase beta subunit [Torreya californica]
          Length = 423

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +G    S 
Sbjct: 2   NKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGETTLGRIFNVLGEPVDDLGPVGALTTS- 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +  ++               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|327540204|gb|EGF26794.1| F0F1 ATP synthase subunit alpha [Rhodopirellula baltica WH47]
          Length = 507

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 98/437 (22%), Positives = 174/437 (39%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N + +A + +   +       V + G +  +      V  LS  V  G+ V     +
Sbjct: 1   MKFNSDEIASVLQAEIEQFDNKIDVREVGTVLEVGDGIARVYGLS-GVMAGEMVEFANGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G    +  + V +  +G    I  G  V   G     P      GRV++ LG P+D
Sbjct: 60  ---IGLAFNLEENSVGVIILGDYLTIEEGQEVKALGTLLSVPAGDAVIGRVLDPLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D++  +         R+ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 117 GKGPV-QTDITRPVEIIATGVAERKPVTEPLQTGIKAIDSMTPIGRGQRELIIGDRKTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K     +G++   V   ++          + V+ A +     L+
Sbjct: 176 TAIAIDAILNQKGQGVKCFYIAIGQKDSAVASVVDVLERHGAMEYTTVIAAGASAPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     +AE+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 236 YVAPYAGTAMAEHFMFNGGHALVVYDDLSKQATAYRQMSLLMRRPPGREAYPGDVFYCHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+IT++  +       +  I  +V SI DG I +   L   G  P
Sbjct: 296 RLLERSSKLSDELGGGSITSLPIIETLEGEVSAYIPTNVISITDGQIYVQPDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++P  SVSR+   A +   KK+   L   +  F        +G     +D      + +
Sbjct: 356 AMNPGISVSRVGGAAQTKAMKKVSGGLRLQLAAFRALEAFAQLG---TDLDPATQAELDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      S
Sbjct: 413 GYRMVELLKQPQYQPLS 429


>gi|166713524|ref|ZP_02244731.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 468

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRSAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD----- 250
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKG 239

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|149003278|ref|ZP_01828174.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP14-BS69]
 gi|237649213|ref|ZP_04523465.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae CCRI 1974]
 gi|237821822|ref|ZP_04597667.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147758738|gb|EDK65735.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP14-BS69]
          Length = 468

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|42558324|gb|AAS19871.1| ATP synthase beta chain [Ctenopteris heterophylla]
          Length = 422

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSTIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|75319564|sp|Q40612|ATPB_OCHNE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|1430917|emb|CAA67541.1| subunit beta of ATPase [Ochrosphaera neapolitana]
          Length = 475

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 20/419 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           ++  + G IS I      V   S  +  + + +V    +     +V ++  +  V    +
Sbjct: 3   DVASKTGIISQIIGPVVDVEFSSGDLPKVYNAIVIDAGDKKVTCEVQQLLGNNKVRAVSM 62

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V   G    +       GR+ N LG+P+D        +  + I    P 
Sbjct: 63  TSTDGLKRGASVLDTGSPITVPVGVPTLGRIFNVLGEPVDELGPCN-AESGLPIHRPAPS 121

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
               +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 122 FTELETKPSVFETGIKVVDLLAPYKRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 181

Query: 195 VG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 182 FGGVGERTREGNDLYAEMKESKVIDEDKLENSKVALVYGQMNEPPGARMRVGLTALTMAE 241

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 242 YFRDVNKQDVLLFIDHIFRFVQAGSEVSALLGSMPSAVGYQPTLATEMGVLQERI--TST 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 300 NEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQ 359

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +       +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 360 PEIVGTEHYATAQRIKETLQRYKELQDIIAILGLDELSEDD-RLTVSRARKVERFLSQP 417


>gi|323149174|ref|YP_004222003.1| ATP synthase CF1 beta subunit [Coccomyxa sp. C-169]
 gi|317467230|gb|ADV29851.1| ATP synthase CF1 beta subunit [Coccomyxa sp. C-169]
          Length = 483

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +GKN          +V ++  D  V    + 
Sbjct: 11  GRITQIIGPVLDVAFSPGKMPNIYNALVIRGKNEAGDEISLTCEVQQLLGDHCVRAISMN 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G+   +       GR+ N LG+P+D    +   +  + I    P  
Sbjct: 71  ATDGLMRGMDVVDTGKPLTVPVGQGTLGRIFNVLGEPVDNLGPVDSKEG-LPIHRSAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 VDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +     +         K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYAEMKESKVIDEDNLSASKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 WIVGEEHYQCAQNVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 424


>gi|310765896|gb|ADP10846.1| F0F1 ATP synthase subunit beta [Erwinia sp. Ejp617]
          Length = 435

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G + V       +       GR++N LG+PID    +G+ +
Sbjct: 22  LGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEE 81

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++   +   +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 82  -RWAIHRSAPSYEDQSNSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 140

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 141 NIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 200

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 201 TMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 258

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 259 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 318

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +  L+ R++E +DI  I G     +      V +   +  FL 
Sbjct: 319 QLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLS 377

Query: 419 QS 420
           Q 
Sbjct: 378 QP 379


>gi|292670131|ref|ZP_06603557.1| ATP synthase F1 sector subunit beta [Selenomonas noxia ATCC 43541]
 gi|292648230|gb|EFF66202.1| ATP synthase F1 sector subunit beta [Selenomonas noxia ATCC 43541]
          Length = 470

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 189/410 (46%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDN----LGQVIRINLD-IVYICPVGI 77
           G +  +      +   +  +  + + +   GK +D       +V++   D I     +  
Sbjct: 4   GKVVQVIGPVVDIEFPAGELPEILNAIKITGKAADREVNLTVEVMQHLGDSITRCIAMSS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G    +       GRV N LG+P+D + +      S  I    P   
Sbjct: 64  TDGLMRGMEADDTGAPIMVPVGEATLGRVFNVLGEPVDHNPAPVGNKESWPIHRPAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           N++   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + +
Sbjct: 124 NQETSTQILETGIKVVDLIAPYSRGGKIGLFGGAGVGKTVLIMELIHNIATEHGGYSVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF      +
Sbjct: 184 GVGERTREGNDLWSEMTESGVIDKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDVQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V 
Sbjct: 244 VLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +  
Sbjct: 302 AVYVPADDLTDPAPAATFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPLVIGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 EVARGVQAVLQKYKELQDIIAILGMEELSDED-KLTVSRARKIQRFLSQP 410


>gi|197334159|ref|YP_002157351.1| ATP synthase F1, beta subunit [Vibrio fischeri MJ11]
 gi|226740689|sp|B5FCZ1|ATPB_VIBFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|197315649|gb|ACH65096.1| ATP synthase F1, beta subunit [Vibrio fischeri MJ11]
          Length = 467

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 179/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V   +    L    +I   +V    +G  
Sbjct: 1   MTTGKIVQIIGAVVDVEFPQGEVPRVYDALNVVDAQERLVLEVQQQIGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +   +    I  + P    
Sbjct: 61  DGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGDIDAEE-HYAIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNSTELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDVARGVQSTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIEKFLTQP 411


>gi|195564346|ref|XP_002105781.1| ATPsyn-beta [Drosophila simulans]
 gi|194201657|gb|EDX15233.1| ATPsyn-beta [Drosophila simulans]
          Length = 439

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 178/380 (46%), Gaps = 20/380 (5%)

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            +  +   E +  G  V   G   RI   A   GR+IN +G+PID    +   D +  I 
Sbjct: 20  QLFAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPID-TDKTAAIH 78

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +     
Sbjct: 79  AEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 138

Query: 190 V---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAV 239
               + + VGER RE  +   + +        D   K  +V    +E P  R    LT +
Sbjct: 139 GGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGL 198

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI 
Sbjct: 199 TVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI- 257

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S S
Sbjct: 258 -TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 316

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +   +   +  ++  ++  +DI  I G     +      V +   I  FL
Sbjct: 317 RIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFL 375

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q        +VF     KL
Sbjct: 376 SQP---FQVAEVFTGHAGKL 392


>gi|21633409|gb|AAM52179.1| ATP synthase beta subunit [Jacquemontia pentanthos]
          Length = 489

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 24/416 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKN---SDNLGQVIRINLDI-VYICPVGIG 78
           G I  I      V     +   + + +V QG++   ++   +V ++  +  V    +   
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVQGRDNEQTNVTCEVQQLLGNNRVRTVAMSDT 80

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P    
Sbjct: 81  DGLMRGMDVIDMGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TKITSPIHRSAPAFTQ 139

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG- 196
                  F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G 
Sbjct: 140 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 199

Query: 197 --ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF 
Sbjct: 200 VGERTREGNDLYMEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFR 259

Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G
Sbjct: 260 DVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEG 317

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +     
Sbjct: 318 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRI 377

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 VGKEHYETAQRVKQ-LQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|326792679|ref|YP_004310500.1| ATP synthase F1 subunit beta [Clostridium lentocellum DSM 5427]
 gi|326543443|gb|ADZ85302.1| ATP synthase F1, beta subunit [Clostridium lentocellum DSM 5427]
          Length = 463

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 184/407 (45%), Gaps = 15/407 (3%)

Query: 24  GYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G+I  I      V   +++         V +   ++ + +V   +  DIV    +   E 
Sbjct: 6   GHIVQIIGPVLDVKFSAEHMPAIYNAIEVKKQDGTNLVVEVAQHLGDDIVRCIAMSATEG 65

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR+ N  G  +DG            I  + P    + 
Sbjct: 66  LVRGMEAVDTGAPISVPVGEQTLGRIFNVTGHAVDGKP--DPQVEKWPIHREAPSFEEQS 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +     + + VG
Sbjct: 124 TSAEILETGIKVVDLICPYLKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVG 183

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 184 ERTREGNDLYHEMTDSGVIAKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDQSGQDVLL 243

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G  P A GY  ++ +E+  L ERI  +  +KG+IT+V +V 
Sbjct: 244 FVDNIFRFTQAGSEVSALLGRTPSAVGYQPTLATEMGTLQERI--TSTKKGSITSVQAVY 301

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R++ E+G YP VDPL S SR+ D      +   + 
Sbjct: 302 VPADDLTDPAPATTFAHLDAKTVLSRAIVEQGIYPAVDPLESSSRVLDPQIVGEEHYSVA 361

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 RGVQSILQRYKELQDIIAILGMDELSEED-KLTVGRARKIQKFLSQP 407


>gi|125717636|ref|YP_001034769.1| F0F1 ATP synthase subunit beta [Streptococcus sanguinis SK36]
 gi|166222420|sp|A3CM14|ATPB_STRSV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|125497553|gb|ABN44219.1| Proton-translocating ATPase, F1 sector, beta subunit, putative
           [Streptococcus sanguinis SK36]
 gi|324990540|gb|EGC22476.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK353]
 gi|324993286|gb|EGC25206.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK405]
 gi|327461557|gb|EGF07888.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1]
 gi|327473281|gb|EGF18701.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK408]
 gi|327489411|gb|EGF21204.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1058]
 gi|328945463|gb|EGG39614.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1087]
          Length = 468

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D           I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFPADAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDDE-KTLVARARRIQFFLSQN 410


>gi|29726120|gb|AAD00587.2| ATP synthase beta subunit [Illicium parviflorum]
          Length = 496

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        +   
Sbjct: 19  GRITQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRIRAV 75

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+   LG+P+D    +     S  I    
Sbjct: 76  AMSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFXVLGEPVDNLGPVDTCTTS-PIHRSA 134

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 135 PAFIQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 194

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 195 SVSGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 254

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 255 AEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 312

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 313 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTM 372

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 373 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 431

Query: 420 S 420
            
Sbjct: 432 P 432


>gi|294678490|ref|YP_003579105.1| ATP synthase F1 subunit beta [Rhodobacter capsulatus SB 1003]
 gi|2493025|sp|P72247|ATPB_RHOCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|1524324|emb|CAA67910.1| FoF1 ATP synthase [Rhodobacter capsulatus]
 gi|294477310|gb|ADE86698.1| ATP synthase F1, beta subunit [Rhodobacter capsulatus SB 1003]
          Length = 472

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 103/417 (24%), Positives = 183/417 (43%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +         + +V   +  + V    +   E + 
Sbjct: 5   GKVTQVIGAVVDVQFEDGLPAILNALETTNNGKRLVLEVAQHLGENTVRTIAMDATEGLV 64

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N +G+P+D    + K +    I    P    +   
Sbjct: 65  RGAAVSDTGGPITVPVGNATLGRILNVIGEPVDERGDVSKAEARA-IHQPAPDFAAQSTE 123

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 124 SQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 183

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +             K  +V    +E P  R    LT +T+AE F  +  
Sbjct: 184 TREGNDLYHEMIESGVINLEKLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 243

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+
Sbjct: 244 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITS 301

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR+ D      +
Sbjct: 302 VQAIYVPADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQVVGEE 361

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 362 HYQVARDVQGMLQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 416


>gi|325688349|gb|EGD30368.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK72]
          Length = 468

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D    +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFSEDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDDE-KTLVARARRIQFFLSQN 410


>gi|323352614|ref|ZP_08087584.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis VMC66]
 gi|322121650|gb|EFX93396.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis VMC66]
 gi|325690056|gb|EGD32060.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK115]
 gi|325693989|gb|EGD35907.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK150]
 gi|325696691|gb|EGD38579.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK160]
 gi|327458645|gb|EGF04993.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1057]
 gi|327468900|gb|EGF14372.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK330]
 gi|332361632|gb|EGJ39436.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1056]
 gi|332362656|gb|EGJ40454.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK49]
 gi|332363078|gb|EGJ40865.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK355]
 gi|332365946|gb|EGJ43702.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis
           SK1059]
          Length = 468

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D    +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFAEDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDDE-KTLVARARRIQFFLSQN 410


>gi|28899843|ref|NP_799448.1| F0F1 ATP synthase subunit beta [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260361991|ref|ZP_05774996.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus K5030]
 gi|260876522|ref|ZP_05888877.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AN-5034]
 gi|260897421|ref|ZP_05905917.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus Peru-466]
 gi|260901306|ref|ZP_05909701.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ4037]
 gi|81839718|sp|Q87KA8|ATPB_VIBPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28808095|dbj|BAC61332.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087912|gb|EFO37607.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus Peru-466]
 gi|308090432|gb|EFO40127.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AN-5034]
 gi|308109863|gb|EFO47403.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ4037]
 gi|308114172|gb|EFO51712.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus K5030]
 gi|328471195|gb|EGF42097.1| F0F1 ATP synthase subunit beta [Vibrio parahaemolyticus 10329]
          Length = 467

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 183/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTDSKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  ++   I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEEV-YSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQDHYDIARGVQQTLQRYKELKDIIAILGMDELSESD-KQVVSRARKIERFLTQP 411


>gi|301794520|emb|CBW36962.1| ATP synthase beta chain [Streptococcus pneumoniae INV104]
          Length = 468

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|241912836|gb|ACS72096.1| AtpB [Brachystele polyantha]
          Length = 489

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGTTLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIKLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|241912832|gb|ACS72094.1| AtpB [Altensteinia fimbriata]
          Length = 489

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDIVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLIRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|112791406|gb|ABI21973.1| ATP synthase beta subunit [Erwinia pyrifoliae DSM 12163]
          Length = 421

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G + V       +       GR++N LG+PID    +G+ +
Sbjct: 22  LGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEE 81

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++   +   +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 82  -RWAIHRSAPSYEDQSNSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 140

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 141 NIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 200

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 201 TMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 258

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 259 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 318

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +  L+ R++E +DI  I G     +      V +   +  FL 
Sbjct: 319 QLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLS 377

Query: 419 QS 420
           Q 
Sbjct: 378 QP 379


>gi|37544906|gb|AAN07056.1| ATP synthase beta subunit [Lilium superbum]
          Length = 487

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   V    +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 14  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGRDTVGPQINVTCEVQQLLGNNRVRAVAMS 73

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 74  ATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 132

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+G + L+     +       +S+ 
Sbjct: 133 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGXTVLIMELINNIAXAHGGVSVF 192

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 193 GGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 252

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 253 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 310

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 311 EGSITSIQAVYVPADDLTDPAPAATFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 370

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 371 RIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|14715606|gb|AAK72443.1|AF283808_8 ATP synthase beta subunit [Clostridium pasteurianum]
          Length = 465

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 117/423 (27%), Positives = 196/423 (46%), Gaps = 17/423 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S+ +  + + +     +   + +V   I  D+V    +   + +
Sbjct: 6   GKVVQVIGPVIDIKFASENLPNIYNALEIGMGDKILIAEVEQHIGDDVVRAISMEPTDGL 65

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   V       +       GR+ N LGK ID    L K D    I    P    +  
Sbjct: 66  RRGAKAVDTEKPISVPVGKPVLGRLFNVLGKTIDEAGDL-KDDEYYPIHRLPPSFEEQSV 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
           V + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 125 VPEMFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AE F  +G +VLL +
Sbjct: 185 RTREGNDLYYEMKESGVIDKTALVFGQMNEPPGARMRVALTGLTMAEKFRDEGQDVLLFI 244

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 245 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVP 302

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS++E G YP V PL S SR+ D      +  ++ S 
Sbjct: 303 ADDLTDPAPATTFTHLDATTVLSRSISELGIYPAVSPLESSSRILDPNIVGEEHYQVASK 362

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +  ++ R+ E +DI  I G     +   D+A+ ++   I  FL Q     S  + F  + 
Sbjct: 363 VKLILERYNELQDIIAILGVDELSEE--DRAIVNRARRIQRFLSQP---FSVAEQFTGMQ 417

Query: 435 KKL 437
            K 
Sbjct: 418 GKF 420


>gi|331083911|ref|ZP_08333020.1| ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330403336|gb|EGG82896.1| ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 462

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 183/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V    Q +  + D +  +      + +V   I    V    +   + +
Sbjct: 4   GKIVQVMGPVVDVEFQEQDLPNIKDALTVELNGKKVVMEVAQHIGNHTVRCIMLASSDGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G+   +       GR+ N LG+ ID  + L   +    I    P    +  
Sbjct: 64  CKDMEVTATGQGISVPVGKETLGRLFNVLGETIDKGEQLDNAE-HWVIHRDPPAFDEQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWSEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGQEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + +++E +DI  I G     D    K V +   +  FL Q 
Sbjct: 361 KVQEYLQKYKELQDIIAILGMEELSDED-KKVVARARKLQKFLSQP 405


>gi|241912898|gb|ACS72127.1| AtpB [Pterichis triloba]
          Length = 489

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVDICTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P     +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|179184018|gb|ACB78133.1| ATPase [Vibrio inusitatus]
          Length = 400

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 94/396 (23%), Positives = 168/396 (42%), Gaps = 24/396 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACW 101
           V  G+ +   G         + +  D V    +G   ++  G  V   GR   +      
Sbjct: 6   VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEL 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  G
Sbjct: 63  LGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+ +   ++  + D     I   +G++   +   +           ++
Sbjct: 122 QRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEESGALANTI 181

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+      P 
Sbjct: 182 VVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPG 241

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER     +E              G++TA+  +     + +  + 
Sbjct: 242 REAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVP 301

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E
Sbjct: 302 TNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE 361

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +     +   +D    K +     + + +KQ  
Sbjct: 362 ---LAAFAQFSSDLDETTKKQLDHGAKVTELMKQKQ 394


>gi|112791400|gb|ABI21970.1| ATP synthase beta subunit [Erwinia rhapontici]
          Length = 418

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G + V       +       GR++N LG+PID    +G+ +
Sbjct: 22  LGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGVATLGRIMNVLGEPIDMKGDIGEEE 81

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 82  -RWAIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 140

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 141 NIAAEHSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 200

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 201 TMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 258

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 259 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 318

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +  L+ R++E +DI  I G     +      V +   +  FL 
Sbjct: 319 QLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLS 377

Query: 419 QS 420
           Q 
Sbjct: 378 QP 379


>gi|55820567|ref|YP_139009.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus LMG
           18311]
 gi|81820501|sp|Q5M5J1|ATPB_STRT2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|55736552|gb|AAV60194.1| H+-translocating ATPase beta subunit [Streptococcus thermophilus
           LMG 18311]
          Length = 468

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V       +   V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFATGDKLPEINNALVVYTDEEKSRRIVLEVALELGEGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID +           I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDMEAPFADDAEREPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERSREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDED-KTLVARARRIQFFLSQN 410


>gi|220905450|ref|YP_002480762.1| F0F1 ATP synthase subunit beta [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254808145|sp|B8J439|ATPB_DESDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219869749|gb|ACL50084.1| ATP synthase F1, beta subunit [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 473

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 102/363 (28%), Positives = 173/363 (47%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G D V       +       GR++N +G+P+D    +   +
Sbjct: 53  LGDNVVRTIAMDATEGLVRGMDAVDTGQPIMVPVGKPSVGRILNVIGRPVDEMGPIN-AE 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     
Sbjct: 112 KYYPIHRPAPAFTDQNTKVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMIN 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +   +     + +++ +V    +E P  R    LTA+
Sbjct: 172 NIAKQHGGSSVFAGVGERTREGNDLYHELKDAGVLERATLVYGQMNEPPGARARVALTAL 231

Query: 240 TIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI 
Sbjct: 232 ACAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGSLQERI- 290

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +    G+IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S S
Sbjct: 291 -TSTNTGSITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTS 349

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +   +   +  ++ +++E +DI  I G     D      V +   I  FL
Sbjct: 350 RILDPNVVGEEHYAVARRVQMVLQKYKELQDIIAILGMDELSDED-KLTVARARRIQRFL 408

Query: 418 KQS 420
            Q 
Sbjct: 409 SQP 411


>gi|32476315|ref|NP_869309.1| F0F1 ATP synthase subunit alpha [Rhodopirellula baltica SH 1]
 gi|81712366|sp|Q7UFB7|ATPA2_RHOBA RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|32446860|emb|CAD78766.1| protein ATP synthase alpha chain [Rhodopirellula baltica SH 1]
          Length = 507

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 98/437 (22%), Positives = 174/437 (39%), Gaps = 19/437 (4%)

Query: 1   MQKNLETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+ N + +A + +   +       V + G +  +      V  LS  V  G+ V     +
Sbjct: 1   MKFNSDEIASVLQAEIEQFDNKIDVREVGTVLEVGDGIARVYGLS-GVMAGEMVEFANGS 59

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
              +G    +  + V +  +G    I  G  V   G     P      GRV++ LG P+D
Sbjct: 60  ---IGLAFNLEENSVGVIILGDYLTIEEGQEVKALGTLLSVPAGDAVIGRVLDPLGNPLD 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + + D++  +         R+ V +  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 117 GKGPV-QTDITRPVEIIATGVAERKPVTEPLQTGIKAIDSMTPIGRGQRELIIGDRKTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           + +   ++  +     K     +G++   V   ++          + V+ A +     L+
Sbjct: 176 TAIAIDAILNQKGQGVKCFYIAIGQKDSAVASVVDVLERHGAMEYTTVIAAGASAPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP     +AE+F   G + L++ D +++ A + R+++      P    YP  VF    
Sbjct: 236 YVAPYAGTAMAEHFMFNGGHALVVYDDLSKQATAYRQMSLLMRRPPGREAYPGDVFYCHS 295

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E   G+IT++  +       +  I  +V SI DG I +   L   G  P
Sbjct: 296 RLLERSSKLSDELGGGSITSLPIIETLEGEVSAYIPTNVISITDGQIYVQPDLFFSGVRP 355

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++P  SVSR+   A +   KK+   L   +  F        +G     +D      + +
Sbjct: 356 AMNPGISVSRVGGAAQTKAMKKVSGGLRLQLAAFRALEAFAQLG---TDLDPATQAELDR 412

Query: 410 VPIIYDFLKQSPSDLSS 426
              + + LKQ      S
Sbjct: 413 GYRMVELLKQPQYQPLS 429


>gi|4519354|dbj|BAA75592.1| ATP synthase beta-subunit [Phacotus lenticularis]
          Length = 376

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   GR   +       GR+ N LG+P+D    + K D ++ I  +
Sbjct: 1   VSMQPTEGLMRGMEVIDTGRPLSVPVGKVTLGRIFNVLGEPVDDMGPV-KVDETLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLVDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGVLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGAAQTVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|23503625|dbj|BAC20409.1| ATP synthase beta-subunit [Carteria obtusa]
          Length = 376

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    +   +  + I  K
Sbjct: 1   VAMNPTEGLMRGMEVLDTGKPICVPVGKVTLGRIFNVLGEPVDNLGPVNAEE-KLPIHRK 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLPDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+ +DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLSDPAPSTTFTHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I   L 
Sbjct: 298 MLQPWIVGEKHYDSARSVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARRIERLLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|308238142|emb|CBK55610.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans]
          Length = 420

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 11/387 (2%)

Query: 40  SQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPS 98
            Q   + + +V    N     Q  ++   +     +G  E +  G  V   G    +   
Sbjct: 4   GQVPEIMEAIVVDENNLTIEVQA-QLGDGVARGIAMGASEGLKRGLAVTRTGAPISVPVG 62

Query: 99  ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158
               GR++N LG+P+DG   +   D    I    P         +  +TGI+VID+  P 
Sbjct: 63  HATLGRIMNVLGEPVDGKGPVQTED-RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121

Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214
             G ++G+F G+G+GK+ L+    R+   +     + + VGER RE  +F  +     + 
Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274
            K  +V    +E P  R  A LT +T+AE+F  +G ++L+ +D+I R+  +  E++   G
Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241

Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334
            +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  D+  DP   +  + LD 
Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393
            +VL+R +AE G YP +DPL S SR  D      +   +  S    + R++E +DI  I 
Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359

Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420
           G     +      V +   I  +L Q 
Sbjct: 360 GMDELSEDD-KLLVSRARKIQRYLSQP 385


>gi|226487050|emb|CAX75390.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Schistosoma japonicum]
          Length = 517

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 186/418 (44%), Gaps = 18/418 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-VIRINLDIVYICPV 75
            +     G + ++      V        + + +  +G+    + +    +  + V    +
Sbjct: 43  SSTAASTGRVVAVIGAVVDVQFDDNLPPILNALEVKGRTPRLILEIAQHLGENTVRTIAM 102

Query: 76  GIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G   V   G   I       GR++N +G+PID    + K  +   I    P 
Sbjct: 103 DGTEGLVRGQQCVDTGGPICIPVGPETLGRIMNVIGEPIDERGPI-KTKMMSGIHQDAPN 161

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
            ++    ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 162 FIDMSTEQEILETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSV 221

Query: 192 ISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
            + VGER RE  +   + +         N  K  +V    +E P  R    LT +T+AEY
Sbjct: 222 FAGVGERTREGNDLYHEMITTGVIDLKGNNSKVSLVYGQMNEPPGARARVALTGLTVAEY 281

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +
Sbjct: 282 FRDQEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTK 339

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D 
Sbjct: 340 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDP 399

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +E   +   +  ++      +DI  I G     +      V +   I  FL Q 
Sbjct: 400 NIVGEEHYSVARGVQKILQENRSLQDIIAILGMDELSEED-RLTVSRARKIQRFLSQP 456


>gi|241912825|gb|ACS72091.1| AtpB [Aa leucantha]
          Length = 489

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVADLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|222356608|gb|ACM48834.1| ATPase alpha subunit [Afrothismia hydra]
          Length = 378

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  D V I   G    I  GD V   G     P      GRV++ALG PIDG  +
Sbjct: 1   GIALNLEKDNVGIVVFGSDTAIKDGDPVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGA 60

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   D    +  K    + R+ V +  +TG++ +D   P+  GQR  +      GK+ L 
Sbjct: 61  L-ASDQRRRVEVKATGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTALA 119

Query: 179 SMFARSDCF--------------------DKVIISLVGERGREVREFIEDYLGDNL-KKS 217
                +                          +   +G++   V + ++        + +
Sbjct: 120 IDTILNQKNIPPIAHPAEAALLGTSDTSPVYCVYVAIGQKRSTVAQLVQILPEARALEYT 179

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           +++ AT+ +   L  +AP +   + EYF  K  + L+I D +++ A + R+++      P
Sbjct: 180 ILLAATASDPAPLLFLAPYSGCAMGEYFRDKSMHALIIFDDLSKQAVAYRQMSLLLRRPP 239

Query: 278 VARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
               +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I DG 
Sbjct: 240 GREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQ 299

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           I     L   G  P ++   SVSR+   A S   K++  S    + ++ E   +     +
Sbjct: 300 ICSETELFYRGLRPAINVGLSVSRVGSAAQSRAMKQVCGSSKLELAQYRE---VAAFAQF 356

Query: 396 RPGVDLILDKAVHQVPIIYD 415
              +D      +++   + +
Sbjct: 357 GSDLDAATQALLNRGARLTE 376


>gi|4519352|dbj|BAA75591.1| ATP synthase beta-subunit [Pteromonas angulosa]
          Length = 376

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G    +       GR+ N LG+P+D    + K D ++ I  +
Sbjct: 1   VSMQPTEGLMRGMEVIDTGSPLSVPVGKVTLGRIFNVLGEPVDNMGPV-KVDETLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLVDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGVLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGAAQTVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|269784248|emb|CBH50769.1| alpha subunit of ATPase [Vibrio sp. Rd2L5]
          Length = 414

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 173/409 (42%), Gaps = 26/409 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACW 101
           V  G+ +   G         + +N D V    +G   ++  G  V   GR   +      
Sbjct: 5   VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEM 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  G
Sbjct: 62  LGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  V      GK+ +   ++  + D     I   +G++   +   +           +V
Sbjct: 121 QRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTV 180

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P 
Sbjct: 181 VVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPG 240

Query: 279 ARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER     +             + G++TA+  +     + +  + 
Sbjct: 241 REAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E
Sbjct: 301 TNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE 360

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
              +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 361 ---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 404


>gi|148988552|ref|ZP_01819985.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP6-BS73]
 gi|148992608|ref|ZP_01822276.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP9-BS68]
 gi|148997432|ref|ZP_01825037.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP11-BS70]
 gi|149011742|ref|ZP_01832938.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP19-BS75]
 gi|168483883|ref|ZP_02708835.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1873-00]
 gi|168489668|ref|ZP_02713867.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae SP195]
 gi|168492577|ref|ZP_02716720.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC0288-04]
 gi|168493409|ref|ZP_02717552.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC3059-06]
 gi|182684462|ref|YP_001836209.1| ATP synthase subunit B [Streptococcus pneumoniae CGSP14]
 gi|225854952|ref|YP_002736464.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae JJA]
 gi|225857133|ref|YP_002738644.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae P1031]
 gi|225859265|ref|YP_002740775.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae 70585]
 gi|303254154|ref|ZP_07340267.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae BS455]
 gi|303260730|ref|ZP_07346690.1| ATP synthase subunit B [Streptococcus pneumoniae SP-BS293]
 gi|303263057|ref|ZP_07348989.1| ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292]
 gi|303264461|ref|ZP_07350381.1| ATP synthase subunit B [Streptococcus pneumoniae BS397]
 gi|303267439|ref|ZP_07353293.1| ATP synthase subunit B [Streptococcus pneumoniae BS457]
 gi|303269786|ref|ZP_07355535.1| ATP synthase subunit B [Streptococcus pneumoniae BS458]
 gi|307068152|ref|YP_003877118.1| F0F1-type ATP synthase subunit beta [Streptococcus pneumoniae
           AP200]
 gi|226740683|sp|B2IQX0|ATPB_STRPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808168|sp|C1CF93|ATPB_STRZJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808169|sp|C1CLK6|ATPB_STRZP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585452|sp|C1C899|ATPB_STRP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|147756487|gb|EDK63528.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP11-BS70]
 gi|147764173|gb|EDK71105.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP19-BS75]
 gi|147925753|gb|EDK76828.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP6-BS73]
 gi|147928625|gb|EDK79639.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP9-BS68]
 gi|172042786|gb|EDT50832.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1873-00]
 gi|182629796|gb|ACB90744.1| ATP synthase subunit B [Streptococcus pneumoniae CGSP14]
 gi|183571943|gb|EDT92471.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae SP195]
 gi|183573274|gb|EDT93802.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC0288-04]
 gi|183576634|gb|EDT97162.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC3059-06]
 gi|225721547|gb|ACO17401.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae 70585]
 gi|225722310|gb|ACO18163.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae JJA]
 gi|225725216|gb|ACO21068.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae P1031]
 gi|301802228|emb|CBW34978.1| ATP synthase beta chain [Streptococcus pneumoniae INV200]
 gi|302598880|gb|EFL65913.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae BS455]
 gi|302635820|gb|EFL66323.1| ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292]
 gi|302638133|gb|EFL68608.1| ATP synthase subunit B [Streptococcus pneumoniae SP-BS293]
 gi|302640679|gb|EFL71077.1| ATP synthase subunit B [Streptococcus pneumoniae BS458]
 gi|302643030|gb|EFL73323.1| ATP synthase subunit B [Streptococcus pneumoniae BS457]
 gi|302646273|gb|EFL76500.1| ATP synthase subunit B [Streptococcus pneumoniae BS397]
 gi|306409689|gb|ADM85116.1| F0F1-type ATP synthase, beta subunit [Streptococcus pneumoniae
           AP200]
 gi|332072299|gb|EGI82782.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA17570]
 gi|332200067|gb|EGJ14140.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA47368]
 gi|332200947|gb|EGJ15018.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA47901]
          Length = 468

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|157164647|ref|YP_001466345.1| F0F1 ATP synthase subunit beta [Campylobacter concisus 13826]
 gi|190358267|sp|A7ZC37|ATPB_CAMC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|112800107|gb|EAT97451.1| ATP synthase F1, beta subunit [Campylobacter concisus 13826]
          Length = 465

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 116/409 (28%), Positives = 191/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G IS +      V        + + +      +GK    + +V     D  V    + + 
Sbjct: 3   GVISQVMGPVVDVDFNDYLPKINEAIEVFFEVEGKKHKLILEVAAHLGDNRVRTIAMDMS 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G      G    +       GR+ N +G  ID  + +   D    I    PP   
Sbjct: 63  EGLTRGLEAKALGAPISVPVGEKVLGRIFNVVGDLIDEGEGINF-DKHWSIHRDPPPFEE 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGAEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKK 371
           V V  D+  DP   +V + LD   VLNRS+AE+G YP VDPL S SR+ D     AD  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPQILGADHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQAVLQKYKDLQDIIAILGMDELSEED-KLTVDRARKIERFLSQP 407


>gi|20269440|gb|AAM17947.1| ATP synthase beta subunit [Styrax officinalis]
          Length = 488

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 179/420 (42%), Gaps = 28/420 (6%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GG +  I  V        +   + + +V   K  D + Q I +  ++        V    
Sbjct: 21  GGIVQIIGPVLDVAFPPGKMPNIYNALVV--KVRDTVDQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRITSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    L A+ + 
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLXALPMX 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL + +I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVXDQDVLLFIANIFRFVQAGSEVSALLGRMPFAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|14718197|gb|AAK72837.1| ATP synthase beta subunit [Qualea sp. Anderson 13660]
          Length = 496

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 180/416 (43%), Gaps = 29/416 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 19  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQKINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+++A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALSMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D   DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADXLTDPAXATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
                  +  +    +   + R++E +DI  I G     +      V +   I  F
Sbjct: 374 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERF 428


>gi|150187327|emb|CAK30228.1| ATP synthase alpha subunit [Streptococcus cristatus ATCC 51100]
          Length = 367

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 158/368 (42%), Gaps = 13/368 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ ++ +  +    G    +    V I  +G   +I  GD +   G+   +      
Sbjct: 7   AMSGELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDAL 63

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ LG+P+DG   L     +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 64  IGRVVDPLGRPVDGLGELATTK-TRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 122

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 123 QRELIIGDRQTGKTSIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTI 182

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 183 VVTASASQPSPLLFLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 242

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 243 REAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQI 302

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 303 FLSDSLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFG 359

Query: 397 PGVDLILD 404
             +D    
Sbjct: 360 SDLDAATQ 367


>gi|111283712|gb|ABH09206.1| ATPase beta subunit [Balantiopsis diplophylla]
          Length = 426

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 167/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 3   NVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGEPVD 62

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 63  NLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGK 121

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 122 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQ 181

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 182 MNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 241

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 242 QPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 299

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDP  S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 300 AAKGIYPAVDPSDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEE 359

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 360 D-RLTVARARKIERFLSQP 377


>gi|19033085|gb|AAL83527.1|AF408799_1 ATP synthase beta subunit [Zygnema peliosporum]
          Length = 402

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  +   G    +       GR+ N LG+P+D    +   +
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMEIIDTGAALSVPVGEVTLGRIFNVLGEPVDELGPVN-AN 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              EI    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TKFEIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +   +   +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGVEHYDIAQGVKQTLQRYKELQDIIAILGLDELSEED-RLVVARA 357

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 358 RKVERFLSQP 367


>gi|20467415|gb|AAL27838.1| ATPase beta subunit [Picea asperata]
          Length = 443

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 21  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 80

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 81  EPVDNLGPVD-ARITSPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 139

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 140 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIDEQNISESKVAL 199

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P 
Sbjct: 200 VYGQMNEPPGARMXVGLTALTMAEYFRDVNEQDVLSFIDNIFRFVQAGSEVSALLGRMPS 259

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   V 
Sbjct: 260 AVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHLDATTVP 317

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 318 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 377

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 378 LSEED-RLIVARARKIERFLSQP 399


>gi|332971779|gb|EGK10727.1| ATP synthase F1 sector beta subunit [Desmospora sp. 8437]
          Length = 469

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 177/368 (48%), Gaps = 11/368 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            +++  + V    +G  + +  G      G+   I       GRV N LG PID  D + 
Sbjct: 51  ALQLGDNTVRCIAMGSTDGVVRGMEAVDTGKPITIPVGRPTLGRVFNVLGDPIDEQDQV- 109

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           + +    I    P   N    E+  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 110 QSETHYSIHRPAPSYENLSTQEEVLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQE 169

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
              +         + + VGER RE  +   +     + +K+ +V    +E P  R    L
Sbjct: 170 LINNVALQHGGLSVFAGVGERTREGNDLYHEMKDAGVLEKTTMVFGQMNEPPGARMRVAL 229

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 230 TGLTMAEFFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 289

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L RSLA +  +P VDPLA
Sbjct: 290 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERSLAAKAIFPAVDPLA 347

Query: 356 SVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR+   A   +E   +   +  ++ R++E +DI  I G     +      V +   I 
Sbjct: 348 STSRILTPAVVGEEHYSVARGVQEVLQRYKELQDIIAILGMDELSEED-KLIVGRARRIE 406

Query: 415 DFLKQSPS 422
            FL Q   
Sbjct: 407 KFLSQPMH 414


>gi|307931024|dbj|BAJ21373.1| ATP synthase CF1 alpha subunit [Prasinococcus capsulatus]
          Length = 357

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/362 (24%), Positives = 160/362 (44%), Gaps = 11/362 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            +  L++ V  G+ +  +  +   +G  + +  D V    +  G  I  G  V   G+  
Sbjct: 1   RIYGLNK-VMAGELLEFEDGS---IGIALNLEADNVGAVLMSEGLSIQEGSSVKGTGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I     + GR++NAL +PIDG   +   +  + I S  P  + R+ V +  +TGI  ID
Sbjct: 57  QIPVGENFLGRIVNALAQPIDGKGEVPSTESRL-IESMAPGIIARRSVYEPMQTGIVSID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+ +   ++  + +     +   +G++   V + +     
Sbjct: 116 AMIPIGRGQRELIIGDRQTGKTAVAIDTILNQKETGVICVYVAIGQKASSVAQIVGTLEE 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
           +     +++V   +D    L+ +AP T   +AEYF   G + L+I D +++ A + R+++
Sbjct: 176 NGAMDYTIIVAENADAPAPLQYLAPYTGAALAEYFMYTGRHTLVIYDDLSKQAAAYRQMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +  +G++TA+  +     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLNNQLGEGSMTALPIIETQAGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  L   G  P ++   SVSR+   A     KK+   L   + +F E   
Sbjct: 296 ISITDGQIFLSGDLFNSGVRPAINVGISVSRVGSAAQVKAMKKVAGKLKLELAQFAELEA 355

Query: 389 IR 390
             
Sbjct: 356 FA 357


>gi|113910928|gb|ABI48196.1| ATPase beta subunit [Azolla sp. Qiu 02051]
          Length = 407

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 5   KGRNPAGQEINVTREVQQLLGNNEVRAVAMSATDGLTRGMSVVDTGAPLSVPVGEITLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    + +  +   I    P           F+TGI+V+D+  P   G +I
Sbjct: 65  IFNVLGEPVDNMGPV-ESSIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 124 GLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEENIS 183

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VL  +D+I RF  +  E++  
Sbjct: 184 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSAL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
           SG +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 244 SGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHL 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R  A +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 302 DATTVLSRGSAAKGIYPAVDPLDSTSTMLQPWIVGAEHYETAQGVKQTLQRYKELQDIIA 361

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 362 ILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|308234029|ref|ZP_07664766.1| ATP synthase F1 subcomplex alpha subunit [Atopobium vaginae DSM
           15829]
 gi|328944383|ref|ZP_08241845.1| ATP synthase F1 sector alpha subunit [Atopobium vaginae DSM 15829]
 gi|327490967|gb|EGF22744.1| ATP synthase F1 sector alpha subunit [Atopobium vaginae DSM 15829]
          Length = 551

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 172/432 (39%), Gaps = 25/432 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNLGQVIRIN 66
            QL++  +     Q   ++ +      ++ L +    G+ +            G    ++
Sbjct: 16  RQLSQINATVDRQQASVVTEVGDGIAHISGL-KAAMAGELLQFTSSSSGKSVYGLAQNLD 74

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            D +     G    I  GD     G    I       GRV+N LG PIDG  ++      
Sbjct: 75  EDEIGAVLFGDVNSIREGDECRTTGHVMSIPVGHAMLGRVVNPLGVPIDGLGAIPTT-HE 133

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS- 184
             I  K P  M RQ V +  +TG+  ID   P+  GQR  +      GK+ +      + 
Sbjct: 134 RPIEFKAPGIMERQPVCEPVQTGLLAIDAMVPIGRGQRELIIGDRKTGKTAIAIDAIVNQ 193

Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
            +     I   +G++   V    E      +  K+++V AT+ +S  L+ +AP++   I 
Sbjct: 194 LNTDMICIYVAIGQKASTVASIRETLHQKGVLDKTIIVAATAADSAPLQYIAPMSGAAIG 253

Query: 243 EYFS------------SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           EYF               G +VL++ D +++ A + R+++      P    YP  +F   
Sbjct: 254 EYFMYNDVNGNPADENHPGGHVLVVYDDLSKQAVAYRQMSLTLHRPPGREAYPGDIFYLH 313

Query: 291 PRLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER       +G  ++TA+  +     + +  I  +V SI DG I L  +L  +G+ 
Sbjct: 314 SRLLERACKLSDARGAGSLTALPIIETQEGDVSAYIPTNVISITDGQIYLQSNLFFQGQR 373

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
           P VD   SVSR+   A     K++  +L   +  + E +       +   +D      + 
Sbjct: 374 PAVDVGISVSRVGGAAQIKSMKQVAGTLRLDLASYREKQ---AFSQFGSDLDATTQYQLT 430

Query: 409 QVPIIYDFLKQS 420
               + + LKQ 
Sbjct: 431 HGAHMTEMLKQP 442


>gi|254421831|ref|ZP_05035549.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335]
 gi|196189320|gb|EDX84284.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335]
          Length = 486

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 183/421 (43%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
              GYI+ I      V     +   + + +   G N          +V ++  D  V   
Sbjct: 8   TNTGYITQIIGPVLDVKFPNGELPKIYNAIKVTGTNPAGQEVTVTCEVQQLLGDSQVRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G      G    +       GR+ N LG+P+D    +   + S+ I    
Sbjct: 68  SMSSTDGLVRGMEAEDLGSPINVPVGKATLGRIFNVLGEPVDEKGPVD-AESSLPIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  ++ +     F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +   +
Sbjct: 127 PELVDLETKPAVFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIQELINNIAKEHSGV 186

Query: 193 SLVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G  G   RE      +++             K  +V    +E P  R    L+A+T+
Sbjct: 187 SVFGGVGERTREGNDLYNEFIESGVINADDLSQSKVALVYGQMNEPPGARMRVALSALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI   
Sbjct: 247 AEYFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDMGDLQERIA-- 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
               G+IT++ +V V  D+  DP   +  + LD    L+R+LA +G YP VDPL S S +
Sbjct: 305 STTDGSITSIQAVYVPADDLTDPAPATTFAHLDATTTLSRALASKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                  +E      ++   + R++E +DI  I G     +    + V +   I  FL Q
Sbjct: 365 LQPDIVGEEHYGTARAVQSTLQRYKELQDIIAILGLDELSEED-RQVVARARKIEKFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|195478613|ref|XP_002086515.1| GE23170 [Drosophila yakuba]
 gi|194186305|gb|EDW99916.1| GE23170 [Drosophila yakuba]
          Length = 627

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 186/416 (44%), Gaps = 23/416 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGI 77
           + G I ++      V    +   + + +  Q    DNL  V+     +  +IV    +  
Sbjct: 104 RKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIDNL--VLEVFHHLGNNIVRCVAMDS 161

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   R++      GR++N +G PID    + K D    I ++ P   
Sbjct: 162 TEGLRRGQPVIDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEI-KSDYYSFIHNEAPELT 220

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           +     +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +  
Sbjct: 221 DLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFV 280

Query: 194 LVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             GER RE  +   + +        D   K V+V    +E P  R    LT +TIAEYF 
Sbjct: 281 GAGERTREGNDLYHEMIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFR 340

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G
Sbjct: 341 DVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNG 398

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 399 SITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDV 458

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++   +  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 459 VGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEDD-KLTVARARKMQRFLSQP 513


>gi|331221317|ref|XP_003323333.1| ATP synthase subunit beta [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309302323|gb|EFP78914.1| ATP synthase subunit beta [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 542

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 112/440 (25%), Positives = 200/440 (45%), Gaps = 22/440 (5%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIV 70
             Y+     Q G I ++      V   S+ +  + + +  Q      + +V   +  + V
Sbjct: 61  RSYASEAKAQIGQIKTVIGAVVDVQFDSENLPPILNALEVQDFGQRLVLEVAQHLGENTV 120

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   E +  G  V   G   +I       GR++N +G+PID    + K    M I 
Sbjct: 121 RTIAMDGTEGLVRGQKVVDTGAPIQIPVGPECLGRIMNVIGEPIDERGPI-KTKTMMPIH 179

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
           ++ P  +++  + +   TGI+V+D+  P   G +IG+  G+G+GK+  +     +     
Sbjct: 180 AEPPEFIDQSTIPEVLVTGIKVVDLLAPYARGGKIGLLGGAGVGKTVFIQELINNVAKAH 239

Query: 190 V---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAV 239
               +   VGER RE  +   + +        ++  K+ +V    +E P  R    LT +
Sbjct: 240 GGYSVFCGVGERTREGNDLYHEMIETGVIQLNNDKSKAALVFGQMNEPPGARARVALTGL 299

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI 
Sbjct: 300 TLAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI- 358

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S S
Sbjct: 359 -TTTRKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKS 417

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           RL D      +   L +++  L+  ++  +DI  I G     +      V +   +  F+
Sbjct: 418 RLLDPRIVGPEHYNLATAVQKLLQDYKGLQDIIAILGMDELSEDD-KLTVERARKVQRFM 476

Query: 418 KQSPSDLSSEDVFQEITKKL 437
            Q     +  +VF  +  +L
Sbjct: 477 SQP---FAVAEVFTGLEGRL 493


>gi|307701971|ref|ZP_07638979.1| ATP synthase F1, beta subunit [Streptococcus mitis NCTC 12261]
 gi|307705146|ref|ZP_07642022.1| ATP synthase F1, beta subunit [Streptococcus mitis SK597]
 gi|307706796|ref|ZP_07643601.1| ATP synthase F1, beta subunit [Streptococcus mitis SK321]
 gi|322376875|ref|ZP_08051368.1| ATP synthase F1, beta subunit [Streptococcus sp. M334]
 gi|307616616|gb|EFN95805.1| ATP synthase F1, beta subunit [Streptococcus mitis NCTC 12261]
 gi|307617881|gb|EFN97043.1| ATP synthase F1, beta subunit [Streptococcus mitis SK321]
 gi|307621307|gb|EFO00368.1| ATP synthase F1, beta subunit [Streptococcus mitis SK597]
 gi|321282682|gb|EFX59689.1| ATP synthase F1, beta subunit [Streptococcus sp. M334]
          Length = 468

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|254509073|ref|ZP_05121176.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus 16]
 gi|219548006|gb|EED25028.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus 16]
          Length = 467

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 184/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V    S+   + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTESKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + +  I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-TYSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNEIALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|19033091|gb|AAL83530.1|AF408802_1 ATP synthase beta subunit [Klebsormidium subtilissimum]
          Length = 402

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAISMSATDGLMRGMKVTDTGAALSVPVGEATLGRIFNVLGEPVDNLGPVNNTK 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  -TFPIHRAAPAFTQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQDISQSKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  ++   +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYEIAQGVKETLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|302747348|gb|ADL63155.1| Atp1 [Arbutus canariensis]
          Length = 349

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLKLELAQ 349


>gi|8517431|emb|CAB94297.1| ATP synthase beta subunit [Ginkgo biloba]
          Length = 468

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 24  KGQDTAGQEIHVTCEVQQLLGNNRVRAVAMNATDGLMRGMKVIDTGAPLSVPVGGATLGR 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVD-ARTTSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVINEQNIS 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEY       +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 321 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTSQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|37522139|ref|NP_925516.1| F0F1 ATP synthase subunit beta [Gloeobacter violaceus PCC 7421]
 gi|81709449|sp|Q7NHG7|ATPB_GLOVI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|35213139|dbj|BAC90511.1| ATP synthase beta subunit [Gloeobacter violaceus PCC 7421]
          Length = 478

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 183/418 (43%), Gaps = 18/418 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNL-----GQVIRINLDI- 69
                  GYI+ I                + + ++ +GK    L      +V ++  D  
Sbjct: 3   TTTAKNVGYITQIIGPVVDAEFPEGDLPAIYNALLIEGKTDSGLDIRLTCEVQQLLGDKK 62

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G      G    +       GR+ N LG+PID    +   D    I
Sbjct: 63  VRAVSMSTTDGMVRGMKAIDTGAPITVPVGKSTLGRIFNVLGEPIDELGPVEIVD-KFSI 121

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P   +     + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +
Sbjct: 122 HRSAPKFTDLVTQPEIFETGIKVIDLLAPYRKGGKIGLFGGAGVGKTVLIQELIHNIAKE 181

Query: 189 KVIISLVGERGREVRE---FIEDYLGDNLKKSVV-VVATSDESPILRKMAPLTAVTIAEY 244
              +S+ G  G   RE      ++   N+   V  V    +E P  R    LTA+T+AEY
Sbjct: 182 HSGVSVFGGVGERTREGNDLYNEFKESNVLGQVALVYGQMNEPPGARMRVGLTALTMAEY 241

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   
Sbjct: 242 FRDVSKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGDLQERI--TSTN 299

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT+V +V V  D+  DP   +  + LD   VL+R LA  G YP VDPL+S S +   
Sbjct: 300 EGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQLASLGIYPAVDPLSSTSTMLQP 359

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   +E   +   +   + R+++ +DI  I G            V++   +  FL Q 
Sbjct: 360 AVVGEEHYNIARGVQSTLQRYKDLQDIIAILGLDELS-PEDKLVVNRARKLQRFLSQP 416


>gi|15988217|pdb|1FX0|B Chain B, Crystal Structure Of The Chloroplast F1-Atpase From
           Spinach
 gi|20150924|pdb|1KMH|B Chain B, Crystal Structure Of Spinach Chloroplast F1-Atpase
           Complexed With Tentoxin
 gi|343355|gb|AAA84626.1| ATPase beta subunit [Spinacia oleracea]
 gi|223530|prf||0811259A ATPase beta
          Length = 498

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + ++ +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLNVAFPPGKMPNIYNALIVKGRDTAGQPMNVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 81  ATDGLTRGMEVIDTGAPLSVPVGGPTLGRIFNVLGEPVDNLRPVD-TRTTSPIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+++  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 TQLDTKLSIFETGIKVVNLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|113910960|gb|ABI48212.1| ATPase beta subunit [Abies homolepis]
          Length = 472

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      V+     +  + + ++ QG+ +   GQ I++  ++        V    + 
Sbjct: 1   ITQIIGPVLDVSFPPGNMPYIYNSLIVQGQGTT--GQEIQVTCEVQQLLGNHKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P  
Sbjct: 59  ATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDASTTS-PIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE+
Sbjct: 178 GGVGERTREGNDLYMEMKESGVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEH 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDPL S S +   
Sbjct: 296 KGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYEIAQGVKQTLQRYKELQDIIAIPGLDELSEDD-RLIVARARKIERFLSQP 412


>gi|34536483|dbj|BAC87675.1| beta subunit of ATP synthase [Hafniomonas montana]
          Length = 376

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G    +       GR+ N LG+P+D    +   + S+ I   
Sbjct: 1   VSMTSTDGLMRGMEVIDTGNPLSVPVGKATLGRIFNVLGEPVDNMGPVS-AENSLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  SPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLAESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF  +   +VLL +D++ R   +  E++   G +P A GY  ++ +E+  + ERI  
Sbjct: 180 MAEYFRDQNKQDVLLFIDNVFRLVQAGAEVSALLGRMPSAVGYQPTLATEMGAVQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +V + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATVFAHLDATTVLSRNLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGDKHYDCAQSVKRTLQRYKELQDIIAILGLDELSESD-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|42558322|gb|AAS19870.1| ATP synthase beta chain [Ctenopteris heterophylla]
          Length = 422

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSTIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|83319730|ref|YP_424079.1| F0F1 ATP synthase subunit beta [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|118573698|sp|Q2ST34|ATPB_MYCCT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|83283616|gb|ABC01548.1| ATP synthase F1, beta subunit [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 476

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 118/422 (27%), Positives = 188/422 (44%), Gaps = 14/422 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRI 65
           +    +   KN     G I  +      V      +  + D +V        + +V   I
Sbjct: 1   MVSSKKTIDKNKTQVIGKIIQVLGPVVDVKFSENNIPKIYDALVVDNNGKKLVLEVEQNI 60

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             +IV    +G  E +  G  V +              GR+ N LG PID    L     
Sbjct: 61  GDEIVRTIAMGPTEGLRRGLDVINTNSPITAPVGNEVLGRMFNVLGDPIDEKPDLDV--K 118

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
            + I    P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +
Sbjct: 119 RLPIHRDAPIYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINN 178

Query: 185 DCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
                    + + VGER RE  +   +++   +  K+ +V    +E P  R    LT +T
Sbjct: 179 IAKAHNGVSVFAGVGERTREGNDLYHEFIEAGVLNKTCLVFGQMNEPPGARMRVALTGLT 238

Query: 241 IAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           IAEYF  K   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 239 IAEYFRDKKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 296

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  IVL+RS+A  G YP VDPLAS SR
Sbjct: 297 TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASSSR 356

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           + D      +   +   +   + +++E + I  I G     +      V +   I +FL 
Sbjct: 357 VLDPEIVGQEHYDIALKVQITLQKYQELQSIIAILGMDELSEED-KLIVQRARKIRNFLS 415

Query: 419 QS 420
           QS
Sbjct: 416 QS 417


>gi|323490921|ref|ZP_08096116.1| F0F1 ATP synthase subunit beta [Planococcus donghaensis MPA1U2]
 gi|323395401|gb|EGA88252.1| F0F1 ATP synthase subunit beta [Planococcus donghaensis MPA1U2]
          Length = 471

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G +V   GR   +       GRV N LG+ ID  + + 
Sbjct: 49  ALHLGDDSVRTIAMESTDGLQRGSVVTDLGRAISVPVGDVTLGRVFNVLGEIIDLGEEIP 108

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +    I    P   +     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 109 LTERRDPIHRSAPTFEHLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 168

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R    L
Sbjct: 169 LINNIAQEHGGLSVFAGVGERTREGNDLFHEMSESGVIKKTAMVFGQMNEPPGARMRVAL 228

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 229 SGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 288

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 289 RITTTS--AGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 346

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR        A+   +   +   + R+ E +DI  I G     D      V++   + 
Sbjct: 347 STSRALSPEIVGAEHYAISREVQETLQRYRELQDIIAILGMDELSDED-KLTVNRARRVQ 405

Query: 415 DFLKQS 420
           +FL Q+
Sbjct: 406 NFLSQN 411


>gi|157285121|gb|ABV31300.1| ATPase [Vibrio shilonii]
          Length = 415

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQIGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L       G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTEAFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLSHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|154424925|emb|CAL18565.1| ATP synthase alpha subunit [Streptococcus cristatus]
          Length = 366

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 158/367 (43%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ ++ +  +    G    +    V I  +G   +I  GD +   G+   +      
Sbjct: 7   AMSGELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGDAL 63

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV++ LG+P+DG   L     +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 64  IGRVVDPLGRPVDGLGELATTK-TRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 122

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 123 QRELIIGDRQTGKTSIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDYTI 182

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 183 VVTASASQPSPLLFLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 242

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 243 REAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQI 302

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 303 FLSDSLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTKFG 359

Query: 397 PGVDLIL 403
             +D   
Sbjct: 360 SDLDAAT 366


>gi|113910862|gb|ABI48163.1| ATPase beta subunit [Leucobryum glaucum]
          Length = 472

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 181/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNSLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVIDTGAPSSVPVGEATLGRIFNVLGEPVDNLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D   P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDPSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  +  D   VL+R LA +G YP VDPL S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTSAHSDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|324995411|gb|EGC27323.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK678]
          Length = 468

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVIGPVVDVAFAAGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D           I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDTPFPADAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDDE-KTLVARARRIQFFLSQN 410


>gi|179183972|gb|ACB78131.1| ATPase [Vibrio comitans]
          Length = 400

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 96/402 (23%), Positives = 170/402 (42%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L++ V  G+ +   G         + +  D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAE-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEESG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               +VVVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+  
Sbjct: 176 ALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           +  + E   +     +   +D    K +     + + +KQ  
Sbjct: 356 LAAYRE---LAAFAQFSSDLDEATKKQLDHGAKVTELMKQKQ 394


>gi|119350467|gb|ABL63184.1| AtpB [Chaetophora incrassata]
          Length = 390

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 162/362 (44%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G D V       +       GR+ N LG+P+D    + + +  + I   
Sbjct: 8   VAMNPTEGLMRGMDAVDTGNPLMVPVGKTTLGRIFNVLGEPVDNLGPV-ETEQKLPIHRS 66

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P   +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 67  APAFTDLDTRLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 126

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 127 VSVFAGVGERTREGNDLYMEMKESGVINESNLGESKVALVYGQMNEPPGARMRVGLTALT 186

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I  F  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 187 MAEYFRDINKQDVLLFIDNIFPFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 244

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 245 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 304

Query: 360 LADKAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       DE       +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 305 MLQPWIVGDEHYACAQQVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLS 363

Query: 419 QS 420
           Q 
Sbjct: 364 QP 365


>gi|325921269|ref|ZP_08183129.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325548236|gb|EGD19230.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 468

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 105/412 (25%), Positives = 178/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFQRHEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL-- 253
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239

Query: 254 ----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
               L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|14718026|gb|AAK72754.1| ATP synthase beta subunit [Davidsonia pruriens]
          Length = 407

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 162/362 (44%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G    +       GR+ N LG+PID    +     +  I   
Sbjct: 1   VAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRS 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 297

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLPVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|332284039|ref|YP_004415950.1| flagellum-specific ATP synthase FliI [Pusillimonas sp. T7-7]
 gi|330427992|gb|AEC19326.1| flagellum-specific ATP synthase FliI [Pusillimonas sp. T7-7]
          Length = 496

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 147/429 (34%), Positives = 226/429 (52%), Gaps = 30/429 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
             G ++  T +    T L   V       +  G+      +V+  +   +Y+ P      
Sbjct: 34  VSGRVTRATGLVLEATGLRLAVGAACKIEISPGRKHWADAEVVGFHGHTLYLMPQSDISG 93

Query: 81  ISLGDLVFHWGRF-----------------------RISPSACWCGRVINALGKPIDGDD 117
           +  G  V                              +       GRV++  G+P+DG  
Sbjct: 94  LPPGARVVPVEPSIQKRVPLPHYASGEDTVATVLSRHLPVGDGLLGRVLDGAGQPLDGLG 153

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +L        + ++    + R  ++     G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 154 ALDNV-RPAPLFAQTINPLARAPIDTVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVL 212

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D ++++L+GERGREV+EFI  +   + L++SVVV A +D SP+LR    +
Sbjct: 213 LGMMARYTRADVIVVALIGERGREVKEFIEHNLGAEGLQRSVVVAAPADVSPLLRLQGAV 272

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A  +AE+F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER
Sbjct: 273 YATRLAEHFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVER 332

Query: 297 IGPSE----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
            G       +  G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+RSLAE G YP +D
Sbjct: 333 AGNGAPVAGRPAGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRSLAESGHYPAID 392

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             AS+SR+       D+ KLV     ++ R++   D+  +G Y PG D  +D+A+ + P 
Sbjct: 393 IEASISRVMSAIVPGDQFKLVHRFKQMLSRYQRNHDLIAVGAYTPGNDPQIDEAIEKHPW 452

Query: 413 IYDFLKQSP 421
           +  +L+Q  
Sbjct: 453 LEAYLQQGM 461


>gi|150187201|emb|CAK30194.1| ATP synthase alpha subunit [Streptococcus salivarius]
          Length = 367

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 155/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFENG---AYGMAQNLETNDVGIIILGDFVAIREGDIVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKHGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|113910932|gb|ABI48198.1| ATPase beta subunit [Pteris ensiformis]
          Length = 457

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 166/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V        + +  G      G    +       GR+ N LG
Sbjct: 18  GQEIDVTCEVQQLLGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVHNS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVLIMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGSTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|4519288|dbj|BAA75559.1| ATP synthase beta-subunit [Pleodorina indica]
          Length = 376

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKRTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|21230029|ref|NP_635946.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66769977|ref|YP_244739.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|81304070|sp|Q4UQF4|ATPB_XANC8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|81860399|sp|Q8PCZ5|ATPB_XANCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21111549|gb|AAM39870.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575309|gb|AAY50719.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 468

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 105/412 (25%), Positives = 179/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +     +  L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFQRNEVPKVYHALKVEGTAITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL-- 253
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239

Query: 254 ----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
               L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|302747376|gb|ADL63169.1| Atp1 [Cannabis sativa]
 gi|302747544|gb|ADL63253.1| Atp1 [Morus alba]
          Length = 349

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G    +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|307709043|ref|ZP_07645503.1| ATP synthase F1, beta subunit [Streptococcus mitis SK564]
 gi|307620379|gb|EFN99495.1| ATP synthase F1, beta subunit [Streptococcus mitis SK564]
          Length = 468

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|226315033|ref|YP_002774929.1| ATP synthase beta chain [Brevibacillus brevis NBRC 100599]
 gi|254808134|sp|C0Z776|ATPB_BREBN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226097983|dbj|BAH46425.1| ATP synthase beta chain [Brevibacillus brevis NBRC 100599]
          Length = 469

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   + +  G      G    +   A   GRV N LG+PID    LG+ D
Sbjct: 54  LGDNLVRTVAMSSTDGLVRGMEAVDTGAAISVPVGAITLGRVFNVLGEPID-LQELGQVD 112

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  K P  +++    +  +TGI+VID+  P   G +IG+F G+G+GK+  +     
Sbjct: 113 RRDPIHRKAPEFVDQATTVEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVTIQELIN 172

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +   +     +  K+ +V    +E P  R    LT +
Sbjct: 173 NIAQEHGGISVFAGVGERTREGNDLYHEMKDAGVLPKTAMVFGQMNEPPGARLRVALTGL 232

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 233 TMAEYFRDEEGRDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 291

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG++T++ ++ V  D++ DP   +  + LD    L RS+AE G +P VDPLAS S
Sbjct: 292 -TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERSIAELGIFPAVDPLASTS 350

Query: 359 R-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R LA      +   +  S+  ++ R++E +DI  I G     D    + V +   I  FL
Sbjct: 351 RALAPDIVGQEHYDVARSVQKILQRYKELQDIIAILGMDELSDDD-KQVVGRARRIQRFL 409

Query: 418 KQS 420
            QS
Sbjct: 410 SQS 412


>gi|149384663|gb|ABR25140.1| ATP synthase beta chain [Odontosoria aculeata]
          Length = 426

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    +  G 
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMSAVDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPVESG- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEKNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT+  +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSTQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 357 RKVERFLSQP 366


>gi|310644377|ref|YP_003949136.1| strongly ATP synthase subunit beta [Paenibacillus polymyxa SC2]
 gi|309249328|gb|ADO58895.1| Strongly ATP synthase subunit beta [Paenibacillus polymyxa SC2]
          Length = 466

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/363 (26%), Positives = 167/363 (46%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GRV N LG PID    + +  
Sbjct: 52  LGDNRVRCIAMSSTDGLVRGAEAIDLGAPISVPVGEATLGRVFNVLGTPIDNGADMSEA- 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  + P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 ARNPIHRQAPSFEELTTQAEMLETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVTIQELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +   +      + K+ +V    +E P  R    LT +
Sbjct: 171 NIAQEHGGISVFAGVGERTREGNDLYHEMRDSGVINKTAMVFGQMNEPPGARLRVALTGL 230

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 231 TMAEYFRDQEGRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 289

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG++T++ ++ V  D++ DP   +  + LD    L R ++E G YP VDPLAS S
Sbjct: 290 -TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKISEMGIYPAVDPLASSS 348

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+        +   +   +  ++ R+ E +DI  I G     +      V +   I  FL
Sbjct: 349 RILSPDVVGEEHYNVAQGVKQILARYNELQDIIAILGMDELSEED-KMLVARARKIQRFL 407

Query: 418 KQS 420
            Q 
Sbjct: 408 SQP 410


>gi|272886758|gb|ACZ96454.1| ATP synthase subunit 1 [Didymium iridis]
 gi|272886760|gb|ACZ96455.1| ATP synthase subunit 1 [Didymium iridis]
          Length = 516

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/410 (23%), Positives = 177/410 (43%), Gaps = 17/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G + ++      V  L   + +G+ V   GK+    G  + +  D V     G  +EI  
Sbjct: 20  GQVITVKDGVAFVAGL-DNLRVGEMVEFTGKS--IFGMALNLEKDQVGCIVFGDDQEIKQ 76

Query: 84  GDLVFHWGRFRIS-PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
            D V    R           GRV++ LG  IDG + +           K P  + R+ V 
Sbjct: 77  DDQVIALNRLVDVAVGEELLGRVVDGLGLLIDGKNEITATLERKNAERKAPGVITRKSVA 136

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-------VIISLV 195
           +   TG +++D   P+  GQR  +      GK+T+      +  F          +   +
Sbjct: 137 EPLLTGYKIVDSMLPIGRGQRELIVGDRQTGKTTIAIDTILNQKFYNQEDIEVFCVYVGI 196

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   +          N  + + +V AT+ +S  L+ MAP T   IAEYF   G + L+
Sbjct: 197 GQKKSSILNLQHLLEKQNALRYTTIVAATAAQSASLQYMAPYTGCAIAEYFRDNGKHALI 256

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER     +    G++TA+  
Sbjct: 257 IYDDLSKHAAAYRQLSLLLRRPPGREAFPGDVFYAHSRLLERACKLNENFGLGSLTALPI 316

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           V     + +  I  ++ SI DG I + + L  +G  P V+  +SVSR+  KA     K +
Sbjct: 317 VETQAGDLSGYIPTNIISITDGQIFMEKDLFFKGIRPAVNVGSSVSRVGSKAQPYALKLV 376

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             +L + + ++ E +   +   +   +D +    +++  ++ + LKQ+P+
Sbjct: 377 TGNLRYQLAQYREYQ---VFAQFDNDIDDVTRGVLNRGALLTEVLKQAPN 423


>gi|312145158|gb|ADQ28322.1| ATPase subunit 1 [Amphibolis griffithii]
          Length = 362

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 156/366 (42%), Gaps = 20/366 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGK-----------STLLSMFARSDCFDKVIISLVGERGREVR 203
             P+  GQR  +      GK             L +M    +     +   +G++   V 
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELHAMAKEENEKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + +++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYAMIVAATASDPAPLQFLAPYSGCALGEYFRDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|289168148|ref|YP_003446417.1| proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus
           mitis B6]
 gi|288907715|emb|CBJ22552.1| proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus
           mitis B6]
          Length = 468

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|268619096|gb|ACZ13324.1| ATP synthase beta chain [Bursaphelenchus xylophilus]
          Length = 533

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 186/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G I ++      V        + + +   G++S  + +V   +  ++V    +   E + 
Sbjct: 68  GRIVAVIGAVVDVQFDENLPPILNALQVSGRSSRLILEVSQHLGDNVVRTIAMDGTEGLI 127

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    I   A   GR+IN +G+PID    +   + +  I +  P  +     
Sbjct: 128 RGQEVIDTGNPITIPVGAETLGRIINVIGEPIDERGPIPTQNFA-PIHADAPEFVEMSVE 186

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 187 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 246

Query: 199 GREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +            K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 247 TREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQ 306

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 307 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTKKGSITSV 364

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            ++ V  D+  DP   +  + LD   VL+R +AE   YP VDPL S SR+ D     +  
Sbjct: 365 QAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNVVGERH 424

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 425 YNIARGVQKILQDYKSLQDIIAILGMDELSEDD-KLVVSRARKIQRFLSQP 474


>gi|123325679|gb|ABM74464.1| ATP synthase beta subunit [Luvunga sp. TT 364]
          Length = 462

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTVDQSINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-TRTTSPIHKYAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 150 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNIA 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 210 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|322379226|ref|ZP_08053617.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS1]
 gi|322379701|ref|ZP_08054014.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS5]
 gi|321147850|gb|EFX42437.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS5]
 gi|321148366|gb|EFX42875.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS1]
          Length = 474

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 191/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVV----HQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G I  +      V   +    + + +      + +  + + +V     D  V    + + 
Sbjct: 3   GKIIQVMGPVVDVEFENYLPAIYEALDVSYHFEDQARELVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G  V   G+   +       GR+ N +G  ID  + L K  +   I    P    
Sbjct: 63  EGLTRGQKVMARGKMIEVPVGEEVLGRIFNVVGDVIDNQEPL-KEPIKWPIHRAAPSFEQ 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+VID+  P   G ++G+F G+G+GK+ ++     +  +      + + 
Sbjct: 122 QSTKTEMFETGIKVIDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +     +  K  +     +E P  R     T +T+AEYF  +   ++
Sbjct: 182 VGERTREGNDLYHEMKEGGVLDKVALCYGQMNEPPGARNRIVFTGLTMAEYFRDEKGLDI 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I R+A S  E++   G +P A GY  ++ SE+ +L ERI  +  + G+IT+V +
Sbjct: 242 LMFIDNIFRYAQSGAEMSALLGRVPSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+ D +    +  +
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILDAQVIGNEHYR 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + +    ++ ++++ +DI  I G     +    K V +   +  FL Q 
Sbjct: 360 IATGTQQILQKYKDLQDIIAILGMDELSEED-KKIVERARKVEKFLSQP 407


>gi|289498325|gb|ADC99201.1| ATP synthase F1 alpha subunit [Vibrio tasmaniensis]
 gi|289498329|gb|ADC99203.1| ATP synthase F1 alpha subunit [Vibrio tasmaniensis]
 gi|289498357|gb|ADC99217.1| ATP synthase F1 alpha subunit [Vibrio tasmaniensis]
          Length = 400

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 96/402 (23%), Positives = 171/402 (42%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L+  V  G+ +   G         + +N D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+  
Sbjct: 176 ALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +             + G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 LAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ 394


>gi|241912840|gb|ACS72098.1| AtpB [Cranichis longipetiolata]
          Length = 489

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + +  G  V   G    +       GR+ N +G
Sbjct: 48  GQQIDVTCEVQQLLGNNRVRAVAMSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIG 107

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     S  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 108 EPVDNLGPVDICTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 166

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 167 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVAL 226

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 227 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 286

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 287 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 344

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +     R++E +DI  I G   
Sbjct: 345 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDE 404

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 405 LSEED-RLTVARARKIERFLSQP 426


>gi|94676869|ref|YP_588610.1| F0F1 ATP synthase subunit beta [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|118573508|sp|Q1LTV4|ATPB_BAUCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|94220019|gb|ABF14178.1| ATP synthase F1, beta subunit [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 457

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 117/408 (28%), Positives = 183/408 (44%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  +      V      V        V  GKN   L    ++   IV    +G+ 
Sbjct: 1   MTTGKIIQVIGAVVDVEFPQNIVPKVYNALEVTNGKNKLILEVEQQLGSGIVRCIAMGVS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V   G   ++        R++N LG+PID    +   +    I    P    
Sbjct: 61  EGLRRGLTVIDLGHAIKVPVGKSTLSRIMNVLGEPIDMKGIINAEE-HWSIHRSAPRYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
               ++  +TGI+VID+  PL  G + G+F G+G+GK+  +    R+   +    S+   
Sbjct: 120 LALSQEILETGIKVIDLMCPLVKGGKAGLFGGAGVGKTVNMMELIRNIAIEHAGYSVFTG 179

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +F  +    N+  K  +V    +E P  R    LT +TIAE F  +G +VL
Sbjct: 180 VGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRFRVALTGLTIAEKFRDEGHDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT++ +V
Sbjct: 240 LFIDNIYRYTLAGAEVSALLGRMPSAVGYQPTLSEEMGLLQERI--TSTKYGSITSIQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKL 372
            V  D+  DP   +  S LD  IVL+R +A  G YP +DPL S SR  D          +
Sbjct: 298 YVPADDLTDPAPATTFSHLDATIVLSRQIASLGIYPAIDPLESTSRQLDPLVVGQKHYDV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 ALGVQGILQRYQELKDIIAILGIDELSEDD-KMVVSRARKIQRFLSQP 404


>gi|309790652|ref|ZP_07685205.1| F0F1 ATP synthase subunit beta [Oscillochloris trichoides DG6]
 gi|308227318|gb|EFO80993.1| F0F1 ATP synthase subunit beta [Oscillochloris trichoides DG6]
          Length = 459

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 16/384 (4%)

Query: 50  VHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           +  G  +    +V + +    V    +G  + +  G      GR   +       GRV N
Sbjct: 21  IPLGDGTTLTCEVQQQLGDGYVKAVAMGTTDGLRRGLEAIDTGRPIAVPVGPATLGRVFN 80

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG   +        I ++ P    +    + F+TGI+VID+  P   G +  +F
Sbjct: 81  VLGQPIDGAGPVAASVERRPIHNEPPSFEEQSTEAQVFETGIKVIDLIAPFTRGGKTAIF 140

Query: 168 AGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-------LKKS 217
            G+G+GK+ ++     +   ++    + + VGER RE  + I +              K+
Sbjct: 141 GGAGVGKTVVIQELIANIAKEQSGFSVFAGVGERSREGNDLIAEMKEAQIDDKTTVFDKT 200

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277
           V+V    +E P  R    LTA+T+AEYF  +G ++LL +D+I RF  +  E+++  G +P
Sbjct: 201 VMVFGQMNEPPGARLRVGLTALTMAEYFRDEGRDILLFVDNIFRFVQAGSEVSSLLGRMP 260

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
              GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D++ DP   +V + LD  I 
Sbjct: 261 SQVGYQPTLGTEMGELQERI--TSTKRGSITSMQAVYVPADDYTDPAPATVFAHLDATIS 318

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L RS+AE   +P VDPLAS SR+ D      +  ++   +  ++ R+ + +DI  I G  
Sbjct: 319 LERSIAERAIFPAVDPLASTSRILDPHVVGEEHYRVAQDVKRVLQRYRDLKDIIAILGME 378

Query: 397 PGVDLILDKAVHQVPIIYDFLKQS 420
              D      V +   I  F  Q 
Sbjct: 379 ELGDDD-KLTVSRARKIELFFSQP 401


>gi|195495396|ref|XP_002095249.1| GE22293 [Drosophila yakuba]
 gi|194181350|gb|EDW94961.1| GE22293 [Drosophila yakuba]
          Length = 627

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 185/416 (44%), Gaps = 23/416 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGI 77
           + G I ++      V    +   + + +  Q    DNL  V+     +  +IV    +  
Sbjct: 104 RKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIDNL--VLEVFHHLGNNIVRCVAMDS 161

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   R++      GR++N +G PID    + K D    I +  P   
Sbjct: 162 TEGLRRGQPVIDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEI-KSDYYSFIHNDAPELT 220

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           +     +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +  
Sbjct: 221 DLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFV 280

Query: 194 LVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             GER RE  +   + +        D   K V+V    +E P  R    LT +TIAEYF 
Sbjct: 281 GAGERTREGNDLYHEMIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFR 340

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G
Sbjct: 341 DVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNG 398

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 399 SITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDV 458

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++   +  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 459 VGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEDD-KLTVARARKMQRFLSQP 513


>gi|148787947|gb|ABR12223.1| ATP synthase beta subunit [Helmholtzia acorifolia]
          Length = 427

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +     R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|133917200|emb|CAJ33241.1| ATP synthase alpha subunit [Lactobacillus amylolyticus DSM 11664]
          Length = 367

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 161/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
               L+  +   + +  +  +    G    +  + V I  +G  ++I  GD V   G+  
Sbjct: 1   RAHGLNNVLS-NELLEFENGS---YGIAQNLEANDVGIIILGNFDDIREGDRVKRTGQIM 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           R+       GRV+N LG+P+DG   + K D +  I SK P  M+RQ V++  +TGI+ ID
Sbjct: 57  RVPVGDALIGRVVNPLGQPVDGLGEI-KTDKTRPIESKAPGVMDRQSVDEPLQTGIKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK++L      +        I   VG++   VR  +E    
Sbjct: 116 ALVPIGKGQRELIIGDRKTGKTSLAIDTILNQKGKDVICIYVSVGQKESTVRTQVETLKR 175

Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
              +  ++VV A   E   +  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 FGAMDYTIVVEAGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  +  +  + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERSAKLSDKLGGGSMTALPFIQTEAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D   SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLRSDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --SFAEFGSDLDQAT 367


>gi|21684895|emb|CAD11574.1| ATP synthase beta subunit [Trithuria submersa]
          Length = 492

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G   D+ GQ I +  ++        V    
Sbjct: 15  GCITQIIGPVLDVAFRPGKMPNIYNSLIVRG--RDSAGQEINVTCEVQQLIGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     S+ I    P
Sbjct: 73  LSATDGLMRGMEVIDTGSPLSVPVGGATLGRIFNVLGEPMDNLGPVDTRTTSV-IHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +       +S
Sbjct: 132 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYIEMKESGVINEQDIAKSKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNQQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGEEHYETAQRVKQTLQRYKELQDIISILGLDELSEED-RLIVARARKIERFLSQP 428


>gi|326566564|gb|EGE16710.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 12P80B1]
          Length = 473

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 179/418 (42%), Gaps = 24/418 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
            G I  I      V      V      +H       L    ++   +V    +G  E + 
Sbjct: 2   SGRIVQIIGAVIDVEFSRGDVPQIFDALHVDGTETTLEVQQQLGDGVVRTIAMGSTEGLK 61

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G    +       GR+++ LG+PID    +   +    I  + P    +   
Sbjct: 62  RGLPVSNSGAPISVPVGQATLGRIMDVLGRPIDEAGPVN-AEQKWSIHREAPSYDEQSNS 120

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VGER
Sbjct: 121 TELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGER 180

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +F  +               K  +V    +E P  R    LT +T+AEYF  + D
Sbjct: 181 TREGNDFYHEMQEAGVVNTEDFTQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKD 240

Query: 251 NVL-------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
                     L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  +
Sbjct: 241 EATGKGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTQ 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLAD 362
            G+IT+V +V V  D+  DP   +  + LD  +VL+R +A +G YP VDPL S S +L  
Sbjct: 299 SGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSHQLDP 358

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +   +   +  ++ R++E +DI  I G     +      V++   I  FL Q 
Sbjct: 359 QVIGEEHYSVARGVQEVLQRYKELKDIIAILGMDELSEED-KLVVYRARKIQRFLSQP 415


>gi|239623864|ref|ZP_04666895.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521895|gb|EEQ61761.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 466

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 191/406 (47%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V    +++  + D ++   +    + +V   +  ++V    +   + +
Sbjct: 4   GKIIQVMGPVVDVAFEDEHLPHIKDALIVDNQGKKCVMEVAQHVGGNVVRCIMLASSDGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG  IDG  SL + +    I    P   ++  
Sbjct: 64  CKDMEVEPTGAGIKVPVGKKTLGRLFNVLGDTIDGGQSL-EDEEKWVIHRDPPSFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VGE
Sbjct: 123 VVEMLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELITNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWTEMGESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDVEHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEVGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR L +     +  ++ +
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEEDVVGKEHYEVAN 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     +      V++   I  FL Q 
Sbjct: 361 KVQQMLQKYKELQDIIAILGMEELSEDD-KLTVNRARKIQRFLSQP 405


>gi|209696443|ref|YP_002264374.1| F0F1 ATP synthase subunit beta [Aliivibrio salmonicida LFI1238]
 gi|226739970|sp|B6EHG4|ATPB_ALISL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|208010397|emb|CAQ80743.1| ATP synthase beta chain [Aliivibrio salmonicida LFI1238]
          Length = 467

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 111/415 (26%), Positives = 178/415 (42%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V   K    L    +I   +V    +G  
Sbjct: 1   MTTGKIVQIIGAVVDVEFPQGSVPRVYDALNVVDAKERLVLEVQQQIGGGVVRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  +    I    P    
Sbjct: 61  DGLRRGLTVENTGAPITVPVGTKTLGRIMNVLGDAIDECGEIGAEE-HYSIHRAAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QANSTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNIEHPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +    G+
Sbjct: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTRSGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARNVQSTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIEKFLTQP 411


>gi|27904521|ref|NP_777647.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|32171341|sp|Q89B39|ATPB_BUCBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|27903918|gb|AAO26752.1| ATP synthase beta chain [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 465

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 117/410 (28%), Positives = 185/410 (45%), Gaps = 15/410 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
            G I  I      V    Q V  + + +    + S  + +V + +   IV    +G    
Sbjct: 3   TGKIVQIIGAVVDVEFSQQSVPKIFNALKVDNQGSILILEVQQQLGSGIVRTIAMGSSNG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPA 135
           +  G LV       ++       GR++N LG+PID    L   D S     EI  K P  
Sbjct: 63  LKRGLLVVDLEHGIKVPVGTATLGRIVNVLGQPIDMKGPLKNHDNSDIEYWEIHRKAPSY 122

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +    S+ 
Sbjct: 123 SEQLTSYEVLETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVF 182

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             VGER RE  +F  +     +  K  +V    +E P  R     T +TIAE F ++G +
Sbjct: 183 TGVGERTREGNDFYHEMSDSRVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRNEGHD 242

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +   KG+IT++ 
Sbjct: 243 VLLFIDNIYRYTLAGTEVSALLGRIPSAVGYQPTLSEEMGVLQERI--TSTNKGSITSIQ 300

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EK 370
           +V V  D+  DP   +  S LD  I L+R +   G YP +DPL S SR  D         
Sbjct: 301 AVYVPADDLTDPSPATTFSHLDSTITLSRQIVSLGIYPAIDPLNSTSRQLDPRIVGQLHY 360

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 DVALGVRSILQRYQELKDIIAILGMDELSEDD-KILVSRARKIQKFLSQP 409


>gi|23503597|dbj|BAC20395.1| ATP synthase beta-subunit [Chloromonas macrostellata]
 gi|23503609|dbj|BAC20401.1| ATP synthase beta-subunit [Chloromonas rosae]
          Length = 376

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K D ++ I   
Sbjct: 1   VSMNPTDGLTRGVEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KADTALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|298490974|ref|YP_003721151.1| ATP synthase F1 subunit beta ['Nostoc azollae' 0708]
 gi|298232892|gb|ADI64028.1| ATP synthase F1, beta subunit ['Nostoc azollae' 0708]
          Length = 482

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 180/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVV----HQGKNSDNLGQVIRINLDI-VYICPVG 76
           GYI+ I      V      +        +      G+N     +V ++  D  V    + 
Sbjct: 11  GYITQIIGPVVDVKFPGGKLPQIYNALTITGTNEAGQNISLTVEVQQLLGDNQVRAVAMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG P+D    +   +  + I    P  
Sbjct: 71  STDGLVRGLEAVDTGAPITVPVGKATLGRIFNVLGNPVDNQGPVN-AEARLPIHRDAPKF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
              +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +         + 
Sbjct: 130 TELETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVF 189

Query: 193 SLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           + VGER RE  +   + +             K  +V    +E P  R    L+ +T+AEY
Sbjct: 190 AGVGERTREGNDLYNEMIESGVINKDNLNESKIALVYGQMNEPPGARMRVGLSGLTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 250 FRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTT 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQP 367

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               DE      S+   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 NIVGDEHYNTARSVQSTLQRYKELQDIIAILGLDELSEED-RLIVARARKVERFLSQP 424


>gi|194873278|ref|XP_001973175.1| GG15949 [Drosophila erecta]
 gi|190654958|gb|EDV52201.1| GG15949 [Drosophila erecta]
          Length = 630

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 113/416 (27%), Positives = 186/416 (44%), Gaps = 23/416 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGI 77
           + G I ++      V    +   + + +  Q    +NL  V+     +  +IV    +  
Sbjct: 104 RKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIENL--VLEVFHHLGNNIVRCVAMDS 161

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   R++      GR++N +G PID    + K D    I ++ P   
Sbjct: 162 TEGLRRGQPVIDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEI-KSDFYSFIHNEAPELT 220

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           +     +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +  
Sbjct: 221 DLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFV 280

Query: 194 LVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             GER RE  +   + +        D   K V+V    +E P  R    LT +TIAEYF 
Sbjct: 281 GAGERTREGNDLYHEMIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFR 340

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G
Sbjct: 341 DVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNG 398

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 399 SITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDV 458

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++   +  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 459 VGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEDD-KLTVARARKMQRFLSQP 513


>gi|111283710|gb|ABH09205.1| ATPase beta subunit [Herzogianthus vaginatus]
          Length = 448

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 167/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 31  GQEIHVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLG 90

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 91  EPVDNLGPVDAS-TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPHRRGGKIGLFGGA 149

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K   
Sbjct: 150 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAS 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 210 VYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 270 AVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHLDATTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDP  S S +        +  +    +   + R++E +DI  I G   
Sbjct: 328 SRGLAAKGIYPAVDPPDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 387

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 388 LSEED-RLTVARARKIERFLSQP 409


>gi|113910956|gb|ABI48210.1| ATPase beta subunit [Juniperus sp. Qiu 96270]
          Length = 448

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K++D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 5   KDNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     S  I    P            +TGI+V+D+  P   G +I
Sbjct: 65  IFNVLGEPVDNLGPVDALTTS-PIHRSAPAFTQLDIKFSILETGIKVVDLLAPYRRGGKI 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 124 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNIS 183

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 184 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 244 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 302 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGKEHYETAQGVKQTLQRYKELQDIIA 361

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 362 ILGLDELSEDD-RLIVARARKIERFLSQP 389


>gi|260771029|ref|ZP_05879957.1| ATP synthase alpha chain [Vibrio furnissii CIP 102972]
 gi|260613918|gb|EEX39109.1| ATP synthase alpha chain [Vibrio furnissii CIP 102972]
 gi|315178659|gb|ADT85573.1| F0F1 ATP synthase subunit alpha [Vibrio furnissii NCTC 11218]
          Length = 466

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 95/408 (23%), Positives = 171/408 (41%), Gaps = 26/408 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G         + +  D V    +G   ++  G+ V   GR   +       
Sbjct: 1   MQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGEKVTGTGRILEVPVGPELL 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  L+  +    P  ++RQ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRQSVDQPVQTGYKSVDAMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVV 219
           R  V      GK+ +   ++  + D     I   +G++   +   +         K ++V
Sbjct: 117 RELVIGDRQTGKTAMAIDAIINQKDSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIAD 326
             +P  VF    RLLER                   + G++TA+  +     + +  +  
Sbjct: 237 EAFPGDVFYLHSRLLERAARVSADYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   +  + E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE- 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 --LAAFAQFSSDLDDATKRQLEHGQKVTELMKQKQ--YAPMSVFDQAL 399


>gi|209525902|ref|ZP_03274437.1| ATP synthase F1, beta subunit [Arthrospira maxima CS-328]
 gi|209493711|gb|EDZ94031.1| ATP synthase F1, beta subunit [Arthrospira maxima CS-328]
          Length = 485

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 190/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           GYI+ +      +     +   + + +   GKN        + +V ++  D  V    + 
Sbjct: 11  GYITQVIGPVVDIKFPDGKLPEIYNALKISGKNEAGQEISVVCEVQQLLGDNQVRSVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      GR  ++   +   GR+ N +G+PID    +   D +  I    P  
Sbjct: 71  GTDGLVRGMEATDTGRAIQVPVGSGTLGRIFNVVGEPIDNLGPV-PNDETSSIHRPAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++ +     F+TGI+V+D+  P   G +IG+F G+G+GK+ ++     +       +S+ 
Sbjct: 130 VDLETSPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   + +             K  +V    +E P  R    L+A+T+AEY
Sbjct: 190 GGVGERTREGNDLYNEMIESGVINKEDLGQSKVALVYGQMNEPPGARMRVALSALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVSKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+RSLA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLASKGIYPAVDPLDSSSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 SVVGEEHYQTARAVQSTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLSQP 424


>gi|188993189|ref|YP_001905199.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           campestris str. B100]
 gi|190358711|sp|B0RWC2|ATPB_XANCB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167734949|emb|CAP53161.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris]
          Length = 468

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 182/412 (44%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +     +  L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFQRNEVPKVYHALKVEGTAITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD----- 250
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKG 239

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|154424953|emb|CAL18579.1| ATP synthase alpha subunit [Streptococcus intermedius]
          Length = 367

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 162/375 (43%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ ++ +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGLDNAMS-GELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ LG+P+DG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVDPLGRPVDGLGEV-KTDKTRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLSDSLFNGGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|302554175|ref|ZP_07306517.1| ATP synthase F1, alpha subunit [Streptomyces viridochromogenes DSM
           40736]
 gi|302471793|gb|EFL34886.1| ATP synthase F1, alpha subunit [Streptomyces viridochromogenes DSM
           40736]
          Length = 529

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 92/447 (20%), Positives = 171/447 (38%), Gaps = 25/447 (5%)

Query: 6   ETLAQLAEDYSKNLVVQ--GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
           + L    + Y  +   +   G ++        V  L       + +  +      LG  +
Sbjct: 13  DALENFVQAYKPDAASREEVGTVTFAGDGIAKVEGL-PSAMANELLKFEDG---TLGLAL 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122
            +    +    +G    I  G  V   G    ++    + GRV++ LG PIDG   + + 
Sbjct: 69  NLEEREIGAIVLGEFSGIEEGQPVSRTGEVLSVAVGEGYLGRVVDPLGNPIDGLGEI-ET 127

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  + P  M R+ V +  +TG + +D  TP+  GQR  +      GK+ L     
Sbjct: 128 QGRRALELQAPTVMERKSVHQPMETGYKAVDTMTPIGRGQRQLIIGDRQTGKTALAVDTI 187

Query: 183 RS----------DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
            +          +   + I   +G++G  +             + + +V A + +    +
Sbjct: 188 INQRDNWRSGDPEKQVRCIYVAIGQKGSTIAGVRGALEEAGALEYTTIVAAPASDPAGFK 247

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP T   I + +  +G +VL+I D +++ A + R ++      P    YP  VF    
Sbjct: 248 YLAPYTGSAIGQQWMYEGKHVLIIFDDLSKQADAYRAVSLLLRRPPGREAYPGDVFYLHS 307

Query: 292 RLLERIGPSEKEKG--NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      E G  ++T +  V    ++ +  I  +V SI DG   L   L   G+ P
Sbjct: 308 RLLERCAKLSDEMGAGSMTGLPIVETKANDVSAFIPTNVISITDGQCFLESDLFNAGQRP 367

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     +++   L   + +F E       G     +D      + +
Sbjct: 368 ALNVGISVSRVGGSAQHKAIRQVSGRLRVDLAQFRELEAFAAFG---SDLDAASKAQLER 424

Query: 410 VPIIYDFLKQSPSD-LSSEDVFQEITK 435
              + + LKQ     +++ED    I  
Sbjct: 425 GQRMVELLKQPQYQPMATEDQVVSIWA 451


>gi|4100657|gb|AAD00918.1| proton-translocating ATPase beta subunit [Streptococcus sanguinis]
          Length = 468

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   S  +   + + +V    +      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVIGPVVDVAFASGDKLPEINNALVVYKNDEKKSKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D           I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLDAPFADDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDDE-KTLVARARRIQFFLSQN 410


>gi|108792415|emb|CAJ44669.1| ATP synthase alpha-subunit [Lactobacillus acidipiscis]
          Length = 367

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 151/369 (40%), Gaps = 13/369 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSA 99
           +    G+ +     +    G    +  + V I  +G  + I  G  V   GR   +    
Sbjct: 6   ENALAGELLEF---SDGTYGMAQNLESNDVGIVILGTYDNIREGQTVKRTGRIMEVPVGE 62

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+N LG+ IDG   + K D +  I  K P  M RQ V +  +TG++ ID   P+ 
Sbjct: 63  EMIGRVVNPLGQAIDGQGEI-KTDKTRPIEKKAPGVMERQSVFEPLQTGLKAIDALVPIG 121

Query: 160 HGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216
            GQR  V      GK+   + ++  + D     I   +G++   VR  +E          
Sbjct: 122 RGQRELVIGDRKTGKTSVAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRKYGAMDY 181

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A       L  +AP     + E F   G +VL++ D +++ A + RE++      
Sbjct: 182 TIVVSAGPSSPAPLLWLAPYAGAAMGEEFMYNGKHVLVVYDDLSKQADAYRELSLILRRP 241

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER      E   G++TA+  +     + +  I  +V SI DG
Sbjct: 242 PGREAYPGDVFYLHSRLLERAAKLNDELGGGSMTALPFIETKAGDVSAYIPTNVISITDG 301

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L+      G  P +D   SVSR+   A     KK+  +L   +  + E       G 
Sbjct: 302 QIFLDSDNFYSGVRPAIDAGTSVSRVGGDAQIKAMKKVAGTLRLDLASYRELESFAQFG- 360

Query: 395 YRPGVDLIL 403
               +D   
Sbjct: 361 --SDLDEAT 367


>gi|63253167|dbj|BAD98349.1| beta subunit of ATP synthesis [Davallodes burbidgei]
 gi|63253171|dbj|BAD98352.1| beta subunit of ATP synthesis [Davallodes gymnocarpum]
 gi|63253215|dbj|BAD98385.1| beta subunit of ATP synthesis [Davallia aff. mariesii CT1018]
 gi|63253223|dbj|BAD98391.1| beta subunit of ATP synthesis [Davallia petelotii]
 gi|63253243|dbj|BAD98406.1| beta subunit of ATP synthesis [Davallia trichomanoides]
 gi|63253247|dbj|BAD98409.1| beta subunit of ATP synthesis [Davallia tyermannii]
          Length = 464

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|241912878|gb|ACS72117.1| AtpB [Pelexia maculata]
          Length = 489

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +G+ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGKQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|241912844|gb|ACS72100.1| AtpB [Cranichis ciliata]
          Length = 489

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGIKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVDICTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|149384659|gb|ABR25138.1| ATP synthase beta chain [Lindsaea madagascariensis]
          Length = 426

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPV-ESS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV-----------VVATSDESPILRK 232
           +       +S+ G  G   RE  + Y+     K +            V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINEKNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT+  +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSTQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAISGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 357 RKVERFLSQP 366


>gi|253702620|ref|YP_003023809.1| F0F1 ATP synthase subunit beta [Geobacter sp. M21]
 gi|259585445|sp|C6E9F1|ATPB_GEOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|251777470|gb|ACT20051.1| ATP synthase F1, beta subunit [Geobacter sp. M21]
          Length = 470

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 18/416 (4%)

Query: 19  LVVQGGYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVY 71
           +    G IS +      V         +     V +   +      V+     +  + V 
Sbjct: 1   MSQNFGKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G+   +       GR++N +G+P+D    +G  +    I  
Sbjct: 61  TIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIG-NEKEYGIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  +N+    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 120 EAPAFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHG 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +     +  K+ +V    +E P  R    L+A++IAEYF 
Sbjct: 180 GFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFR 239

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG
Sbjct: 240 DEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTNKG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 298 SITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 358 IGDEHYAIARQVQYVLQKYKDLQDIIAILGMDELSEED-KLVVARARKIQKFLSQP 412


>gi|149384405|gb|ABR25025.1| ATP synthase beta chain [Asplenium nidus]
          Length = 426

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|4519336|dbj|BAA75583.1| ATP synthase beta-subunit [Pandorina unicocca]
          Length = 376

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+PID   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLTVPVGKVTLGRIFNVLGEPIDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFVDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|323496906|ref|ZP_08101934.1| F0F1 ATP synthase subunit beta [Vibrio sinaloensis DSM 21326]
 gi|323317980|gb|EGA70963.1| F0F1 ATP synthase subunit beta [Vibrio sinaloensis DSM 21326]
          Length = 467

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 184/415 (44%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V    S+   + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVTESKERLVLEVQQQLGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  + +  I  + P    
Sbjct: 61  DGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDECGDIGAEE-TYSIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNEIALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARGVQQTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIERFLTQP 411


>gi|241912880|gb|ACS72118.1| AtpB [Platythelys querceticola]
          Length = 489

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGTPLSVPFGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+G++ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|119511018|ref|ZP_01630139.1| H(+)-transporting ATP synthase, subunit alpha [Nodularia spumigena
           CCY9414]
 gi|119464363|gb|EAW45279.1| H(+)-transporting ATP synthase, subunit alpha [Nodularia spumigena
           CCY9414]
          Length = 516

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 185/431 (42%), Gaps = 15/431 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +     T  Q+  +Y   +   + G I S+T     ++ L   V   + +   G   D L
Sbjct: 10  LNNTFTTFEQVLNNYQPQIQTREIGIIKSLTQGIANISGL-PNVKADELLRFSG---DIL 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G    ++ + + +  +G  + ++ G  V   GR   +       GRV+N  G+ +D   +
Sbjct: 66  GIAFNLDANEIGVILLGNSQHLAAGQEVQRTGRVLDVPVGEGLLGRVLNVTGQALDNQGA 125

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +   +    +  +    M+R  V    +TGI+V+D   P+  GQR  +     IGK+ + 
Sbjct: 126 IQVTE-RRPVERQAAAIMDRAPVTIPLQTGIKVVDALVPIGRGQRELIVGDRQIGKTAIA 184

Query: 179 SMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           +    +        I   +G+R   V + I D    N    ++VVVA+ ++ P L+ + P
Sbjct: 185 TDTIINQKQQNVICIYCAIGKRASSVAKVIADLRQHNAMDYTIVVVASGEDPPGLQYITP 244

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A TIAEYF  KG +VL++ D +T  A + RE++      P    YP  +F    RLLE
Sbjct: 245 YAATTIAEYFMEKGRDVLIVYDDLTHHAWAYRELSLLLRRPPGREAYPGDIFYIHSRLLE 304

Query: 296 RIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R     +E   G++TA+  V     N +  I  ++ SI DG I L+  L ++G  P VD 
Sbjct: 305 RATHLRAELGGGSLTALPIVETQAQNLSAYIPTNLISITDGQIYLSPDLFQKGVLPAVDV 364

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  K        +   L     +F+E       G     +D    + + +   +
Sbjct: 365 GKSVSRVGGKTQLPAYSAVAGDLRLSYSQFQEVEVFARFG---TQLDEETRQTLERGRRV 421

Query: 414 YDFLKQSPSDL 424
            + LKQ     
Sbjct: 422 REILKQPQYQP 432


>gi|63253207|dbj|BAD98379.1| beta subunit of ATP synthesis [Davallia griffithiana]
          Length = 464

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|119350517|gb|ABL63209.1| AtpB [Picochlorum eukaryotum]
          Length = 392

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 163/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +   D  + I
Sbjct: 5   VRAVAMSATDGLMRGMEVLDTGAPLSVPVGPATLGRIFNVLGEPVDNLGPVDAPD-RLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESGVINESKLSESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +               ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGKTHYDCAQNVKQTLQRYKELQDIIAILGLDELTEED-RLVVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|21956132|dbj|BAC06429.1| ATP synthase beta-subunit [Volvox carteri f. nagariensis]
 gi|116256368|dbj|BAF35215.1| ATP synthase beta subunit [Pleodorina thompsonii]
          Length = 376

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|904161|gb|AAA70390.1| adenosine triphosphatase [Tinospora caffra]
          Length = 498

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPV-ESRTTSPIHXSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G + G+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLXTKLSIFETGIKVVDLLAPYRRGGKXGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXXAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLXRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|4519286|dbj|BAA75558.1| ATP synthase beta-subunit [Pleodorina japonica]
 gi|4519340|dbj|BAA75585.1| ATP synthase beta-subunit [Platydorina caudata]
 gi|21956006|dbj|BAC06373.1| ATP synthase beta-subunit [Volvox obversus]
          Length = 376

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|241912842|gb|ACS72099.1| AtpB [Cranichis engelii]
          Length = 489

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGIKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVDICTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|158602251|gb|ABW74592.1| ATP synthase beta subunit [Anemone occidentalis]
          Length = 473

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+     +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVXNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
            +F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 ALFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|195927674|gb|ACG55502.1| ATP synthase alpha subunit [Aliivibrio salmonicida]
          Length = 395

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 91/403 (22%), Positives = 167/403 (41%), Gaps = 25/403 (6%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              +  L+  V  G+ +   G +       + +  D V    +G   ++  G  V   GR
Sbjct: 1   IIRIHGLAD-VMQGEMIELPGGH---YALALNLERDSVGAVVMGPYADLQEGMKVTGTGR 56

Query: 93  F-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
              +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + 
Sbjct: 57  ILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPLQTGYKS 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDY 209
           +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +   
Sbjct: 116 VDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIFAIYVAIGQKASTIANVVRKL 175

Query: 210 LGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
                   ++VVVA++ ES  L   AP     + EYF  +G++ L++ D +++ A + R+
Sbjct: 176 EEHGALANTIVVVASASESAALHIFAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQ 235

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVLV 315
           I+      P    +P  VF    RLLER                   + G++TA+  +  
Sbjct: 236 ISLLLKRPPGREAFPGDVFYLHSRLLERAARVSVAYVEKFTNGEVKGKTGSLTALPIIET 295

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
              + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   
Sbjct: 296 QAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGAAQTKIIKKLSGG 355

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +   + ++ E   +     +   +D    K +     + + +K
Sbjct: 356 IRTALAQYRE---LAAFAQFSSDLDEATKKQLDHGEKVTELMK 395


>gi|89242556|gb|ABD64636.1| ATPase beta subunit [Vriesea splendens]
          Length = 411

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 7   LGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TR 65

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 66  TTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 125

Query: 184 SDCFDKVIISLVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G  G   RE      +               K  +V    +E P  R 
Sbjct: 126 NIAKAHGGVSVFGGVGERTREGKDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARM 185

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 186 RVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 245

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 246 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 303

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +     R++E +DI  I G     +      V + 
Sbjct: 304 DPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARA 362

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 363 RKIERFLSQP 372


>gi|302747506|gb|ADL63234.1| Atp1 [Icacina mannii]
          Length = 349

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCF-----------DKVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETFYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|157285071|gb|ABV31275.1| ATPase [Vibrio mediterranei]
          Length = 429

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 95/420 (22%), Positives = 176/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +     IGK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQIGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                  + ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVL 314
           +I+      P    +P  VF    RLLER     +E              G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L       G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTEAFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAAYRE---LAAFAQFSSDLDEATKRQLSHGQKVTELMKQKQ--YAPMSVFDQAL 410


>gi|30265987|gb|AAM33458.1| ATP synthase beta subunit [Coleochaete sp. 489a1]
          Length = 388

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDAIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDTSK 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  VS-PIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINSDNLSESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  ++   +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYEIAQGVKKTLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|189017672|gb|ACD71505.1| F1-ATPase alpha subunit [Burmannia coelestis]
          Length = 357

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 84/360 (23%), Positives = 149/360 (41%), Gaps = 19/360 (5%)

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGK 121
           + +  + V I   G    I  GDLV   G     P      GRV++ALG PIDG  +L  
Sbjct: 2   LNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSD 61

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
            +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +    
Sbjct: 62  HE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDT 120

Query: 182 ARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPI 229
             +                 +   +G++   V + ++     N  + S++V AT+ +   
Sbjct: 121 LLNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAP 180

Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF  
Sbjct: 181 LQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYL 240

Query: 290 LPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
             RLLER      +   G+ TA+  +     + +  I  +V SI DG I     L   G 
Sbjct: 241 HSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVISITDGQICSETELFYRGI 300

Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
            P ++   SVSR+   A     K++  S    + ++ E   +     +   +D      +
Sbjct: 301 SPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALL 357


>gi|23503623|dbj|BAC20408.1| ATP synthase beta-subunit [Carteria radiosa]
          Length = 376

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 164/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG PID    +   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGDPIDNLGPVNAEE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+ +DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLSDPAPSTTFTHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D       S+   + R++E +DI  I G     +      V +   I   L 
Sbjct: 298 MLQPWIVGDKHYDCARSVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARRIERLLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|14718226|gb|AAK72851.1| ATP synthase beta subunit [Smilax glauca]
          Length = 491

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 47  KGRDIAGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 106

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 107 IFNVLGDPVDDLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 165

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 166 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 225

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 226 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 285

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 286 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 343

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +   +    +  +    +     R++E +DI  
Sbjct: 344 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQXRIVGEEHYETAQRVKQTSQRYKELQDIIA 403

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 404 ILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|318610455|dbj|BAJ61697.1| ATP synthase beta-subunit [Volvulina compacta]
          Length = 403

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 169/370 (45%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G+   +       GR+ N LG+P+D   ++   +
Sbjct: 2   LGDNCVRAVSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVL-VE 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 GLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +       +       S+   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLESTSTMLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|299890928|gb|ADJ57427.1| ATP synthase CF1 beta subunit [uncultured prymnesiophyte C19847]
          Length = 475

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 177/419 (42%), Gaps = 20/419 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           N   + G+IS I      +     +   + + +V          +V ++  +  V    +
Sbjct: 3   NTAAKTGFISQIIGPVVDIEFPTGELPKIYNALVVSTDTESITCEVQQLLGNNKVRAVSM 62

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G      G    +       GR+ N LG P+D          S  I    P 
Sbjct: 63  TSTDGLKRGASALDTGAPISVPVGKSTLGRIFNVLGVPVDEMGPCDNSSTS-PIHRPSPQ 121

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
             +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 122 FTDLDTKPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 181

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 182 FGGVGERTREGNDLYCEMKESGVINENKLDDSKVALVYGQMNEPPGARMRVGLTALTMAE 241

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 242 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGVLQERI--TST 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 300 NEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQ 359

Query: 363 KAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +        +   + R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 360 PGIVGELHYGTAQRIKETLQRYKELQDIIAILGLDELSEED-RQTVARARKVERFLSQP 417


>gi|289498383|gb|ADC99230.1| ATP synthase F1 alpha subunit [Vibrio tasmaniensis]
          Length = 399

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 24/396 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACW 101
           V  G+ +   G         + +N D V    +G   ++  G  V   GR   +      
Sbjct: 5   VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEM 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  G
Sbjct: 62  LGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  V      GK+ +   ++  + D     I   +G++   +   +           +V
Sbjct: 121 QRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTV 180

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P 
Sbjct: 181 VVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPG 240

Query: 279 ARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER     +             + G++TA+  +     + +  + 
Sbjct: 241 REAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E
Sbjct: 301 TNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE 360

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +     +   +D    K +     + + +KQ  
Sbjct: 361 ---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ 393


>gi|18253303|gb|AAL66415.1|AF368465_5 proton-translocating ATPase beta subunit [Streptococcus pneumoniae]
          Length = 468

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + L+    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLNSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|84999258|ref|XP_954350.1| ATP synthase beta chain, mitochondrial precursor [Theileria
           annulata]
 gi|65305348|emb|CAI73673.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Theileria annulata]
          Length = 583

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 112/425 (26%), Positives = 186/425 (43%), Gaps = 29/425 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGE 79
           ++ GYIS +      V        + + +      +    +V +   D V     +G  E
Sbjct: 102 MRKGYISQVIGAVVDVRFDGPPPPILNALWVDNDGTRLSLEVAQHLGDGVARSIAMGATE 161

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    I       GR++N  G  IDG   + K +  + I    P    +
Sbjct: 162 GLMRGQEVLDTGSPITIPVGTATLGRIMNVTGDAIDGFGPI-KSEHQLPIHRPAPTFEEQ 220

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
           +  E    TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         I + V
Sbjct: 221 KSDEALLITGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVANKHGGYSIFAGV 280

Query: 196 GERGREVREFIEDYLGDNL------------------KKSVVVVATSDESPILRKMAPLT 237
           GER RE  E   + +   +                   K+ +V    +E P  R    LT
Sbjct: 281 GERTREGNELYHEMMSTGVIKRALKPNGKGDEADFTGSKASLVYGQMNEPPGARARVALT 340

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ER
Sbjct: 341 GLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDLGSLQER 400

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S
Sbjct: 401 I--TTTKKGSITSVQAIYVPADDITDPAPATTFTHLDATTVLSRQIAELGIYPAVDPLDS 458

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            SR+       + +  +  ++  ++  ++  +DI  I G     +      V +   +  
Sbjct: 459 TSRMLSSHIVGERQYNVARAVQKILQDYKSLQDIIAILGMDELSEDD-KFVVARARKVQR 517

Query: 416 FLKQS 420
           FL Q 
Sbjct: 518 FLSQP 522


>gi|58582227|ref|YP_201243.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624120|ref|YP_451492.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188576787|ref|YP_001913716.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188576979|ref|YP_001913908.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58426821|gb|AAW75858.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368060|dbj|BAE69218.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188521239|gb|ACD59184.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521431|gb|ACD59376.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 458

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 144/429 (33%), Positives = 225/429 (52%), Gaps = 6/429 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           E  +   +++ G +     +    T       +G     +        +V+    +  Y+
Sbjct: 30  EPTAGRTLIREGILRRAVGLTLEATG--CEAPMGATCKVEVDGGWLDAEVVGFAGERTYL 87

Query: 73  CPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      +     V     R  +       GRVI++ G P+DG   + + + S+ +   
Sbjct: 88  MPSAELHGLLPNARVVPSRHRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RAEGSVGMAGV 146

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ +      G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D ++
Sbjct: 147 SINPLAREPITTSLDVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTAADVIV 206

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVR+F+      + L+++VVV A +D  P+ R      A  IAE+F  +G 
Sbjct: 207 VGLIGERGREVRDFVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGL 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA 
Sbjct: 267 NVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAF 326

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +
Sbjct: 327 YTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWR 386

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDV 429
             +  L  L+  +   RD+  IG Y+ G D   D+A+ + P I +FL Q     S   D 
Sbjct: 387 LRIRKLKRLLSAYTANRDLIAIGAYQRGSDPATDEALARWPEIVEFLGQDVHKASVLSDS 446

Query: 430 FQEITKKLQ 438
              + + ++
Sbjct: 447 LSALQQLVE 455


>gi|284999817|dbj|BAI67809.1| ATP synthase beta-subunit [Gloeomonas kupfferi]
          Length = 376

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGLEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEAALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|195126431|ref|XP_002007674.1| GI13073 [Drosophila mojavensis]
 gi|193919283|gb|EDW18150.1| GI13073 [Drosophila mojavensis]
          Length = 618

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 115/433 (26%), Positives = 189/433 (43%), Gaps = 26/433 (6%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGI 77
           + G I ++      V    +   + + +  Q      L  V+     +  ++V    +  
Sbjct: 70  REGIIHAVIGPVIDVYFPDEMPEVLNAMEVQDAPIGRL--VLEVFHHLGNNVVRCVAMDS 127

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G   R+       GR+IN +G PID    + K +    I ++ P   
Sbjct: 128 TDGLKRGQKVIDTGYPIRVPVGKTVLGRIINVVGDPIDERGEI-KSEFYSFIHNEAPLLE 186

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
                 +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +  
Sbjct: 187 ELSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFV 246

Query: 194 LVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             GER RE  +   + +        D+  K  +V    +E P  R    LT +TIAEYF 
Sbjct: 247 GAGERTREGNDLYHEMIETKVISLEDDTSKVALVYGQMNEPPGARSRVVLTGLTIAEYFR 306

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G
Sbjct: 307 DIDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTKNG 364

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365
           +IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 365 SITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRVLDPDI 424

Query: 366 SADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
             DE   +  ++   +  ++  +DI  I G     +      V +   +  FL Q     
Sbjct: 425 VGDEHYNVARAVQKTLQGYKSLQDIIAILGMDELSEED-KLTVARARKMQRFLSQP---F 480

Query: 425 SSEDVFQEITKKL 437
              +VF     KL
Sbjct: 481 QVAEVFTGTPGKL 493


>gi|157285095|gb|ABV31287.1| ATPase [Vibrio pectenicida]
          Length = 408

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 98/409 (23%), Positives = 171/409 (41%), Gaps = 26/409 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACW 101
           V  G+ +   G         + +  D V    +G   ++  G  V   GR   +      
Sbjct: 5   VMQGEMIELPGS---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPEL 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + +  LS  +    P  ++RQ V++  +TG + +D   P+  G
Sbjct: 62  LGRVVNTLGEPIDGKGPI-EAKLSSPVEVIAPGVIDRQSVDQPVQTGYKSVDSMIPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  V      GK+ L   ++  + +     I   +G++   +   +           ++
Sbjct: 121 QRELVIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALANTI 180

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP    T+ EYF  +G++ L++ D +++ A + R+I+      P 
Sbjct: 181 VVVASASESAALQYLAPYAGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPG 240

Query: 279 ARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER                   + G++TA+  +     + +  + 
Sbjct: 241 REAFPGDVFYLHSRLLERAARVNADYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   +  + E
Sbjct: 301 TNVISITDGQIFLQTELFNSGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE 360

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
              +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 361 ---LAAFAQFSSDLDDATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 404


>gi|23503603|dbj|BAC20398.1| ATP synthase beta-subunit [Chloromonas reticulata]
          Length = 376

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGVEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAETALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|59713171|ref|YP_205947.1| F0F1 ATP synthase subunit beta [Vibrio fischeri ES114]
 gi|81310858|sp|Q5E1N7|ATPB_VIBF1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|59481272|gb|AAW87059.1| ATP synthase F1, beta subunit [Vibrio fischeri ES114]
          Length = 467

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 179/415 (43%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +  G I  I      V      V        V   +    L    +I   +V    +G  
Sbjct: 1   MTTGKIVQIIGAVVDVEFPQGEVPRVYDALNVVDAQERLVLEVQQQIGGGVVRCIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +   +    I  + P    
Sbjct: 61  DGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGDIDAEE-HYAIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    +  +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNSTELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 358 GQEHYDIARGVQSTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIEKFLTQP 411


>gi|23503635|dbj|BAC20414.1| ATP synthase beta-subunit [Chlorogonium euchlorum]
          Length = 376

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 99/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + + + ++ I  +
Sbjct: 1   VSMQQTDGLMRGMEVVDTGKPLSVPVGRDTLGRIFNVLGEPVDNLGPVQQ-NQTLPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APLFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLPESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYTTAQNVKKTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|322392085|ref|ZP_08065547.1| ATP synthase F1 sector beta subunit [Streptococcus peroris ATCC
           700780]
 gi|321144985|gb|EFX40384.1| ATP synthase F1 sector beta subunit [Streptococcus peroris ATCC
           700780]
          Length = 468

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 177/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   ++    +   + ++ G  V   GR   +       GRV N LG  ID +   G
Sbjct: 48  ALELGDGMIRTIAMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFG 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +   A+   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGAEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|167648692|ref|YP_001686355.1| F0F1 ATP synthase subunit beta [Caulobacter sp. K31]
 gi|190358276|sp|B0T335|ATPB_CAUSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|167351122|gb|ABZ73857.1| ATP synthase F1, beta subunit [Caulobacter sp. K31]
          Length = 542

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 179/419 (42%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
            G +  +      V    +   +    + V               +  + V    +   E
Sbjct: 68  TGKLVQVIGAVVDVEFTGELPAILNALETVNIATGQRLVFEVAQHLGQNTVRAIAMDATE 127

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   R+       GR++N +G+PID    + K D+   I    P    +
Sbjct: 128 GLVRGQEVRDTGQSIRVPVGPGTLGRIMNVIGEPIDEQGPI-KSDIFRTIHRDAPTFAEQ 186

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
               +   TGI+VID+  P   G +IG+F G+G+GK+  +     +        S+   V
Sbjct: 187 TNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAGV 246

Query: 196 GERGREVREFIEDYLGDNL------------KKSVVVVATSDESPILRKMAPLTAVTIAE 243
           GER RE  +   + +  N+             +  +V    +E P  R    LT ++IAE
Sbjct: 247 GERTREGNDLYHEMIESNVNVDPKINGSTEGSRCALVYGQMNEPPGARARVALTGLSIAE 306

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 307 YFRDEEGKDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TST 364

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            KG+IT+V ++ V  D+  DP   +  + LD   VL+R +A +  +P VDPL S SR+ D
Sbjct: 365 NKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMD 424

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +  S+  ++ +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 425 PLIIGQEHYDVARSVQEVLQQYKSLKDIIAILGMDELSEED-KLTVARARKISRFLSQP 482


>gi|37543307|gb|AAL92718.1| ATP synthase beta subunit [Chaetosphaeridium sp. 7c2]
 gi|37543309|gb|AAL92719.1| ATP synthase beta subunit [Chaetosphaeridium sp. 539a3]
          Length = 402

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMDVIDTGSALSVPVGEVTLGRIFNVLGEPVDNMGPVNAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLGESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|158602281|gb|ABW74607.1| ATP synthase beta subunit [Myosurus minimus]
          Length = 479

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V QG+  D +GQ I +  ++        V    
Sbjct: 2   GRIAQIIGPVLDVSFPPGKMPNIYNALVVQGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 59

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 60  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 118

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 119 AFIQLDTQLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 178

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 179 VFGGXGERTREGNDLYKEMKESGVINEEKIAESKVALVYGQMNEPPGARMRVGLTALTMA 238

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY T++ +E+  L ERI  + 
Sbjct: 239 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQTTLSTEMGSLQERI--TS 296

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD     +R LA +G YP VDPL S S + 
Sbjct: 297 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATXXXSRVLAAKGIYPAVDPLDSTSTML 356

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QPRIVGKEHYETAQRVKXTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|24940196|emb|CAD43396.1| ATP synthase beta subunit [Buglossoides arvensis]
          Length = 478

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  I      V     +   + + +V  G   D +GQ I +  ++        V    
Sbjct: 8   GRVVQIIGPVLDVAFXPGKMPNIYNALVVXG--RDXVGQPINVXCEVQQLLGNNRVXAXA 65

Query: 75  VGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     ++ G  V   G    +       GR+ N LG P+D    +     +  I    P
Sbjct: 66  MSATXGLTXGMEVIDTGAXXSVPVGGATLGRIFNVLGXPVDNLGPVD-TRTTSPIHRSAP 124

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 125 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 184

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 185 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 244

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 245 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 302

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 303 TKAGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 362

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 QPRIVGEEHYEIAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 421


>gi|179279|gb|AAA51808.1| ATP synthase beta subunit [Homo sapiens]
          Length = 529

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 108/414 (26%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G + +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGDQLKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    ++ P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNQPPGARARVALTGLTVAEYFRDQ 296

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+I
Sbjct: 297 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSI 354

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     
Sbjct: 355 TSVQAIYVPADDLTDPAPATTFADLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVG 414

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++  ++   DI  I G     +      V +   I  FL Q 
Sbjct: 415 SEHYDVARGVQKILQDYKSLHDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 467


>gi|322372413|ref|ZP_08046949.1| ATP synthase F1, beta subunit [Streptococcus sp. C150]
 gi|321277455|gb|EFX54524.1| ATP synthase F1, beta subunit [Streptococcus sp. C150]
          Length = 468

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V       +   V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFAAGEKLPEINNALVVYTDEEKSKRIVLEVALELGEGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID D           I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKDTLGRVFNVLGDTIDLDAPFADDAEREPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|89574051|gb|ABD77251.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Sus scrofa]
          Length = 437

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 190/424 (44%), Gaps = 21/424 (4%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDL 86
           ++      V        + + +  QG+ +  + +V   +    V    +   E +  G  
Sbjct: 1   AVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQK 60

Query: 87  VFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145
           V   G   +I       GR++N +G+PID    + K      I ++ P  M     ++  
Sbjct: 61  VLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAAIHAEAPEFMEMSVEQEIL 119

Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202
            TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE 
Sbjct: 120 VTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 179

Query: 203 REFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
            +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +VLL
Sbjct: 180 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 239

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ 
Sbjct: 240 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 297

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLV 373
           V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   + 
Sbjct: 298 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 357

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             +  ++  ++  +DI  I G     +      V +   I  FL Q        +VF   
Sbjct: 358 RGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP---FQVAEVFTGH 413

Query: 434 TKKL 437
             KL
Sbjct: 414 LGKL 417


>gi|94987296|ref|YP_595229.1| flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731545|emb|CAJ54908.1| Flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 439

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 151/422 (35%), Positives = 229/422 (54%), Gaps = 8/422 (1%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK--NSDNLGQVIRINLDIVYI 72
              N +   G ++ +  +    T L   +     ++            +V+      +  
Sbjct: 13  KESNPLRVYGKVNKVVGLVAEGTGLKSPLGAVCHMLSGNDEHGEAIAAEVVGFREGNLLF 72

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P G    I  G L+ +              G   NA G+P+ G + +    L + + S 
Sbjct: 73  MPYGEMRGIQPGSLIRNTSLPPVFPVGKEILGHAFNAFGEPLSGGNPIIPEKL-IPLYSN 131

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P  + R R++     G+R I+    L  GQR+G+ AGSG+GKSTL+ M AR    D  +
Sbjct: 132 PPSPLERPRIKDPLDVGVRAINSMITLGKGQRVGIMAGSGVGKSTLMGMMARYTSADVNV 191

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           I L+GERGREV EF+ ++   + + +SV+++ATSD+SP++R  A   A  +AEYF  +G 
Sbjct: 192 IGLIGERGREVVEFMEKELGPEGMTRSVLIIATSDQSPLVRMRAAYAATAVAEYFRDQGK 251

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL++DS+TRFA + REI    GE P  +GY  +VF++LP+LLER G S    G IT +
Sbjct: 252 DVLLMMDSVTRFAMAAREIGLAVGEPPTTKGYTPTVFAQLPKLLERTGRSNT--GTITGI 309

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VLVDGD+ N+PIAD+VRSILDGHIVL R LA++  +P +D L S+SRL     + ++ 
Sbjct: 310 YTVLVDGDDFNEPIADAVRSILDGHIVLTRDLADQDHFPAIDVLRSISRLRSDICTPEQV 369

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDV 429
           +    +   +  F +  D+  IG Y  G +  +DKA+     I  FLKQ+ SD S+ ED 
Sbjct: 370 QDGRIVGRYMATFRKAEDMINIGAYIQGSNEEIDKAITMHGPIESFLKQNISDRSTLEDS 429

Query: 430 FQ 431
           F+
Sbjct: 430 FR 431


>gi|142564|gb|AAA22253.1| ATP synthase beta subunit (atpD) (EC 3.6.1.3) [Bacillus firmus]
          Length = 467

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 169/368 (45%), Gaps = 16/368 (4%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFH---WG-RFRISPSACWCGRVINALGKPIDGDD 117
            I +  D V    +G  + +     V+     G    +       GRV N LG+ ID  +
Sbjct: 50  AIALGDDSVRTVAMGSTDGLY----VYRGTDTGAPISVPVGEATLGRVFNVLGEAIDLGE 105

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +   D    I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L
Sbjct: 106 PVAADDKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYIIGGKIGLFGGAGVGKTVL 165

Query: 178 LSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           +     +   +  +IS+   VGER RE  +   +      +KKS +V    +E P  R  
Sbjct: 166 IQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIKKSAMVFGQMNEPPGARMA 225

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
             L+ +T+AE+F  +    +L+      F  +  E++   G +P A GY  ++ +E+ +L
Sbjct: 226 VALSGLTMAEHFRDRDGQDVLLFVVNISFTQAGSEVSALLGRMPSAVGYQPTLATEMGQL 285

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDP
Sbjct: 286 QERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDP 343

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           LAS SR         +   +   +   + +++E +DI  I G     +      VH+   
Sbjct: 344 LASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAILGMDELSEED-KLVVHRARR 402

Query: 413 IYDFLKQS 420
           I  FL Q+
Sbjct: 403 IQFFLSQN 410


>gi|4519272|dbj|BAA75551.1| ATP synthase beta-subunit [Volvox aureus]
 gi|21956000|dbj|BAC06370.1| ATP synthase beta-subunit [Volvox aureus]
 gi|21956002|dbj|BAC06371.1| ATP synthase beta-subunit [Volvox aureus]
          Length = 376

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|328852582|gb|EGG01727.1| hypothetical protein MELLADRAFT_45062 [Melampsora larici-populina
           98AG31]
          Length = 542

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 199/443 (44%), Gaps = 22/443 (4%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINL 67
                Y+     Q G I ++      V+   + +  + + +  Q      + +V   +  
Sbjct: 58  DQTRSYATEAKGQIGQIKTVIGAVVDVSFDGENLPPILNALEVQDFGQRLVLEVAQHLGE 117

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   E +  G  V   G   +I       GR++N +G+PID    +      M
Sbjct: 118 NTVRTIAMDGTEGLVRGQKVIDTGAPIQIPVGPECLGRIMNVIGEPIDERGPIN-TKTQM 176

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I ++ P  +++  + +   TGI+V+D+  P   G +IG+  G+G+GK+  +     +  
Sbjct: 177 PIHAEPPSFIDQSTIPEVLVTGIKVVDLLAPYARGGKIGLLGGAGVGKTVFIQELINNVA 236

Query: 187 FDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPL 236
                  +   VGER RE  +   + +        ++  K+ +V    +E P  R    L
Sbjct: 237 KAHGGYSVFCGVGERTREGNDLYHEMIETGVIQLKNDKSKAALVFGQMNEPPGARARVAL 296

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + E
Sbjct: 297 TGLTLAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQE 356

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL 
Sbjct: 357 RI--TTTRKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLD 414

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SRL D      +   L +++  L+  ++  +DI  I G     +      V +   + 
Sbjct: 415 SKSRLLDPRIVGEEHYNLATAIQKLLQDYKGLQDIIAILGMDELSEDD-KLTVERARKVQ 473

Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437
            F+ Q     +  +VF  +  +L
Sbjct: 474 RFMSQP---FAVAEVFTGLEGRL 493


>gi|289524796|emb|CBJ94454.1| alpha subunit of ATPase [Vibrio sp. Rd 14.14]
          Length = 423

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/408 (23%), Positives = 172/408 (42%), Gaps = 26/408 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G         + +N D V    +G   ++  G  V   GR   +       
Sbjct: 1   MQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEML 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  +      GK+ +   ++  + D     I   +G++   +   +           +VV
Sbjct: 117 RELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIAD 326
             +P  VF    RLLER     +               G++TA+  +     + +  +  
Sbjct: 237 EAFPGDVFYLHSRLLERAARVSEVYVERFTNGEVTGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE- 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 --LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 399


>gi|20467371|gb|AAL27816.1| ATPase beta subunit [Ephedra sp. CR33]
          Length = 446

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 26  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 85

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 86  EPVDNLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 144

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 145 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVAL 204

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 205 VYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 264

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 265 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 322

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 323 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 382

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 383 LSEED-RLTVARARKIERFLSQP 404


>gi|148553547|ref|YP_001261129.1| F0F1 ATP synthase subunit beta [Sphingomonas wittichii RW1]
 gi|190358706|sp|A5V3X5|ATPB_SPHWW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|148498737|gb|ABQ66991.1| ATP synthase F1, beta subunit [Sphingomonas wittichii RW1]
          Length = 484

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/434 (25%), Positives = 189/434 (43%), Gaps = 27/434 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V+       + + +      +  + +V   +    V    +   + ++
Sbjct: 11  GRISQVIGAVVDVSFDGSLPAILNALETTNNGNRLVLEVAQHLGEGTVRTIAMDATDGLT 70

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   R+       GR++N +G+PID    +     S  I ++ P  +++   
Sbjct: 71  RGQEVTDTGSQIRVPVGPQTLGRILNVIGEPIDERGPVNATQTS-PIHAEAPLFVDQSTD 129

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 130 ASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGER 189

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   ++L   +              K  +V    +E P  R    L+ +TIAEYF
Sbjct: 190 TREGNDLYHEFLDAGVIAKDADGNPTPEGSKVALVFGQMNEPPGARARVALSGLTIAEYF 249

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   K
Sbjct: 250 RDVEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTNK 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V ++ V  D+  DP   +  + LD    LNR+++E G YP VDPL S SR+ +  
Sbjct: 308 GSITSVQAIYVPADDLTDPAPATSFAHLDATTNLNRAISELGIYPAVDPLDSTSRMLEPR 367

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               +  +   ++   + +++  +DI  I G     +      V +   I  FL Q    
Sbjct: 368 IVGQEHYETARAVQETLQKYKSLQDIIAILGMDELSEED-KLTVQRARKIQRFLSQP--- 423

Query: 424 LSSEDVFQEITKKL 437
               +VF  I  K 
Sbjct: 424 FHVAEVFTGIAGKF 437


>gi|115443579|ref|YP_778598.1| ATP synthase CF1 beta chain [Bigelowiella natans]
 gi|122239917|sp|Q06J29|ATPB_BIGNA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|110810224|gb|ABG91430.1| ATP synthase CF1 beta chain [Bigelowiella natans]
          Length = 477

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/438 (25%), Positives = 189/438 (43%), Gaps = 27/438 (6%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQY---VCLGDFVVHQGKNS--DNLGQVIRI-NLDIVYI 72
           +    G ++ I      +T   +    V + D VV + K        ++ ++     V  
Sbjct: 1   MTTNTGKVTQIIGPVIDITFPIEAMSSVNIYDAVVIEDKTEKLSVTCEIQQLIGSQSVRT 60

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + I  G  V   G    +        R+ N LG+PID    + K + +  I   
Sbjct: 61  VSMSSTDRIKRGMDVVQTGTAIAVPVGKSTLRRIFNVLGQPIDNLGDV-KNEETRPIHRS 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++     + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +       
Sbjct: 120 APEFVDLDIRLEIFETGIKVIDLLAPYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGG 179

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    L A+T
Sbjct: 180 VSVFAGVGERTREGNDLYAEMKESGVIVEDNLLESKVTLVYGQMNEPPGARMRVGLAALT 239

Query: 241 IAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AE+F      +VLL +D++ RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 240 MAEFFRDSSKQDVLLFIDNVFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 297

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP A +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 298 TSTKDGSITSIQAVYVPADDLTDPAAATTFAHLDATTVLSRGLASKGIYPAVDPLGSTST 357

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       D   +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 358 MLQPWIVGDSHYECAQKVKQTLQRYKELQDIIAILGLEELSEED-RLTVDRARKIERFLS 416

Query: 419 QSPSDLSSEDVFQEITKK 436
           Q        ++F  +  K
Sbjct: 417 QP---FFVAEIFTGLAGK 431


>gi|4519282|dbj|BAA75556.1| ATP synthase beta-subunit [Volvox rousseletii]
          Length = 376

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|208659520|gb|ACI31190.1| AtpA [Vibrio breoganii]
 gi|208659522|gb|ACI31191.1| AtpA [Vibrio breoganii]
 gi|208659524|gb|ACI31192.1| AtpA [Vibrio breoganii]
 gi|208659526|gb|ACI31193.1| AtpA [Vibrio breoganii]
 gi|289498323|gb|ADC99200.1| ATP synthase F1 alpha subunit [Vibrio sp. 1C10]
 gi|289498355|gb|ADC99216.1| ATP synthase F1 alpha subunit [Vibrio breoganii]
 gi|289498373|gb|ADC99225.1| ATP synthase F1 alpha subunit [Vibrio breoganii]
          Length = 400

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/402 (23%), Positives = 170/402 (42%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L++ V  G+ +   G         + +  D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAE-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPFADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPELLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEESG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+  
Sbjct: 176 ALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 LAQYRE---LAAFAQFSSDLDETTKKQLDHGAKVTELMKQKQ 394


>gi|22266799|gb|AAM94913.1|AF522463_8 subunit beta [Ilyobacter tartaricus]
          Length = 467

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/406 (26%), Positives = 188/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIR-INLDIVYICPVGIGEEI 81
           G ++ I      V+  ++   + + +     N + L  +V + +  ++V    +   E +
Sbjct: 5   GILTQIIGPVVDVSFDNELPKIYNAIKIDRGNGEILVAEVQQHLGNNVVRAICMDGSEGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR++N LG+ ID  + L   + +  I  + P   ++  
Sbjct: 65  QRGMEVIDTGAPITVPVGKAVLGRILNVLGEAIDQKEELNAEEFA-PIHREAPAFEDQGT 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 DVEIFETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE R+  ++     +  K+ +V    +E P  R    LT +T+AE F  K   +VLL 
Sbjct: 184 RTREGRDLFDEMTESGVLDKTSLVYGQMNEPPGARLRVALTGLTMAENFRDKEGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V +V V
Sbjct: 244 VDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R +A  G YP VDPL S S       +  +      
Sbjct: 302 PADDLTDPAPATTFTHLDATTVLSRRIASLGIYPAVDPLDSTSTALQPGVTGHEHYTTAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R++E +DI  I G     D      V +   I  F  Q 
Sbjct: 362 EVQSVLQRYKELQDIIAILGMDELSDED-KITVSRARKIERFFSQP 406


>gi|904085|gb|AAA84057.1| adenosine triphosphatase [Boquila trifoliolata]
          Length = 498

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 180/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 80

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D          S  I    P  
Sbjct: 81  ATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPXXXXTTS-PIHRSAPAF 139

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 140 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 199

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 200 GGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEY 259

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  +  +
Sbjct: 260 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXXAVGYQPTLSTEMGSLQERI--TSTK 317

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 318 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 377

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 378 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|33596155|ref|NP_883798.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis
           12822]
 gi|33573158|emb|CAE36809.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis]
          Length = 491

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 151/457 (33%), Positives = 233/457 (50%), Gaps = 31/457 (6%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S    +  G I+    +    T L   V     + + +G +     +V+  +   +
Sbjct: 30  IRAASTEPWLVSGRITRAAGLVLHATGLRLPVGAACRIELARGHDHWADAEVVGFDGHTL 89

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 90  YLMPQSDISGLPPGARVVPAEPAVQRPVPLPRKAELNGNAKPQVGRHLPVGNAMLGRVVD 149

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG   L   + +  + +     ++R  ++     G+R I+    +  GQR+G+F
Sbjct: 150 GAGRPLDGLGPLAGAEQA-PLTALPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLF 208

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D 
Sbjct: 209 AGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADV 268

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+LR      A  +AE+F  +G +VLLI+DS+TRFA + REIA   GE P  +GYP SV
Sbjct: 269 SPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPATKGYPPSV 328

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G        + G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R L
Sbjct: 329 FAKLPALVERTGMGAPSPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHL 388

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      + ++ + V     ++ R++  RD+  +G Y  G D  
Sbjct: 389 AEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGAYVAGADPQ 448

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEITKKLQ 438
           LD A+ + P +  +L+Q+  D         ++ + L+
Sbjct: 449 LDDAIARYPRLEAYLQQNIGDSVDYGTAIDQLQRSLE 485


>gi|37543311|gb|AAL92720.1| ATP synthase beta subunit [Coleochaete sp. 201d1]
          Length = 402

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDAIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDTTK 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  VS-PIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINADNISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|121997297|ref|YP_001002084.1| flagellar protein export ATPase FliI [Halorhodospira halophila SL1]
 gi|121588702|gb|ABM61282.1| flagellar protein export ATPase FliI [Halorhodospira halophila SL1]
          Length = 449

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 155/434 (35%), Positives = 228/434 (52%), Gaps = 12/434 (2%)

Query: 6   ETLAQLAEDYSKNLVVQGGYISSITS---------VYYTVTCLSQYVCLGDFVVHQGKNS 56
             ++ L +D++  +  +  ++ ++           V  T+        LG     +    
Sbjct: 2   SVVSGLGQDWTARVRRRVEHVEAVRPPVEGVLRRMVGLTLEAEGCRAPLGARCTIEDGQG 61

Query: 57  DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG 115
               +V+    D +Y+ P G    +     V   G   +        GRVI+  G+PIDG
Sbjct: 62  GVEAEVVGFAGDRLYLMPTGDLRGVMPNARVIPRGSGAQARVGEELLGRVIDGGGQPIDG 121

Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175
              L K      +M++    + R  +      G+R I+    +  GQR+G+FAGSG+GKS
Sbjct: 122 GGPL-KARERTPLMAEPINPLERAPIAAPLDVGVRSINALFTVGRGQRMGLFAGSGVGKS 180

Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234
            LL M  R    D V++ L+GERGREVREFI + LG   L ++VVV A +D SP+ R   
Sbjct: 181 VLLGMMTRYTTADVVVVGLIGERGREVREFITEILGRHGLARAVVVAAPADTSPLFRLHG 240

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            + A +IAEYF  +G NVLL++DS+TR+A + REI    GE P  +GYP SVF  LPRL+
Sbjct: 241 AMRATSIAEYFRDQGYNVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFGLLPRLV 300

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ER G      G+ITA  +VLV+GD+  +PIADS R+ILDGH+VL+RSLA+ G YP VD  
Sbjct: 301 ERAGNGPDGGGSITAFYTVLVEGDDQQEPIADSARAILDGHLVLSRSLADSGVYPAVDVE 360

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           AS+SR          +K       L   + +  D+  +G Y+ G D ++D+A+   P + 
Sbjct: 361 ASISRAMMAITEGRHQKAAQRFRELYAAYRQNEDLISVGAYQRGSDPLVDQAIQYQPRLR 420

Query: 415 DFLKQSPSDLSSED 428
            FL+Q  S+    D
Sbjct: 421 AFLQQDVSEAVDFD 434


>gi|284999821|dbj|BAI67811.1| ATP synthase beta-subunit [Gloeomonas lateperforata]
          Length = 376

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGLEVVDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEAALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|149384375|gb|ABR25010.1| ATP synthase beta chain [Anemia rotundifolia]
          Length = 426

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMSVTDTGSPLSVPVGEITLGRIFNVLGEPVDNLGPVDSS- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITELIN 119

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV-----------VVATSDESPILRK 232
           +       +S+ G  G   RE  + Y+     K +            V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNVSESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VL  +D+I RF  +  E++ + G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSASLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDESSEED-RLTVSRA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|125624725|ref|YP_001033208.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493533|emb|CAL98514.1| ATP synthase F1, beta subunit [Lactococcus lactis subsp. cremoris
           MG1363]
          Length = 486

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 117/435 (26%), Positives = 194/435 (44%), Gaps = 22/435 (5%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNS 56
           M +N   + Q  +   K L    G I+ +      V        L +     +V++  N 
Sbjct: 1   MNRN-SVVRQKIKTGGKTLS--SGKITQVIGPVVDVE-FGSDAKLPEINNALIVYKDVNG 56

Query: 57  ----DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111
                 L   + +    V    +   + ++ G  V   G+   +       GRV N LG 
Sbjct: 57  LKTKITLEVALELGDGAVRTIAMESTDGLTRGLEVLDTGKAVSVPVGESTLGRVFNVLGD 116

Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171
            IDG +          I  K P         +   TGI+V+D+  P   G ++G+F G+G
Sbjct: 117 VIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKGGKVGLFGGAG 176

Query: 172 IGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227
           +GK+ L+     +   +   IS+   VGER RE  +   +      ++K+ +V    +E 
Sbjct: 177 VGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEP 236

Query: 228 PILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++
Sbjct: 237 PGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTL 296

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G
Sbjct: 297 ATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATTNLERRLTQMG 354

Query: 347 RYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPLAS SR L  +    +  ++   +  ++ R++E +DI  I G     D     
Sbjct: 355 IYPAVDPLASSSRALTPEIVGEEHYEVAMEVQRVLQRYKELQDIIAILGMDELSDDE-KI 413

Query: 406 AVHQVPIIYDFLKQS 420
            V +   I  FL Q+
Sbjct: 414 LVGRARRIQFFLSQN 428


>gi|7688409|emb|CAB89741.1| ATP synthase beta subunit [Urtica dioica]
          Length = 481

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/388 (27%), Positives = 169/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             DN GQ I    ++        V    +   + +  G  V   G    +       GR+
Sbjct: 49  GRDNXGQQINXTCEVQQLLGNNRVRAVAMSATDCLMRGMEVIDTGAPLSVPVGGATLGRI 108

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI V+D+  P   G +IG
Sbjct: 109 FNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIXVVDLLAPYRRGGKIG 167

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 168 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 227

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 228 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 287

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 288 GRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 345

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 346 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 405

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 406 LGLDELSEED-RLTVARARKIERFLSQP 432


>gi|332375360|gb|AEE62821.1| unknown [Dendroctonus ponderosae]
          Length = 515

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 18/410 (4%)

Query: 25  YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISL 83
            I ++      V        + + +    ++   + +V   +  + V    +   E +  
Sbjct: 50  RIVAVIGAVVDVQFEDDLPPILNALEVANRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 109

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V   G   RI       GR++N +G+PID    +   D    I ++ P  ++    +
Sbjct: 110 GQNVLDTGYPIRIPVGVETLGRIMNVIGEPIDERGPI-PTDKLAAIHAEAPEFVDMSVEQ 168

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERG 199
           +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER 
Sbjct: 169 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 228

Query: 200 REVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
           RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +   +
Sbjct: 229 REGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQD 288

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V 
Sbjct: 289 VLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQ 346

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +  
Sbjct: 347 AIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHY 406

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 407 NIARGVQKILQDYKSLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 455


>gi|299782958|gb|ADJ40956.1| ATP synthase F1, beta subunit [Lactobacillus fermentum CECT 5716]
          Length = 473

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 174/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + +  G    +      +       GRV N LG+P+D     G
Sbjct: 47  ALELGDGVVRTIAMDGTDGLKRGMAAENTDASISVPVGDDTLGRVFNVLGEPVDNGPEFG 106

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                M I    P   +     +  +TGI+VID+  P   G +IG+F G+G+GK+ L+  
Sbjct: 107 PDAQRMPIHRDAPKYEDLSNTTEVLETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQE 166

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236
              +       IS+   VGER RE  +   +     + +K+ +V    +E P  R    L
Sbjct: 167 LIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKTAMVYGQMNEPPGARMRVAL 226

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 227 TGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQE 286

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT++ +V V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 287 RI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERRLTQIGIYPAVDPLA 344

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S  L  +    +  ++ + + H++ R+ E +DI  I G     D      V +   I 
Sbjct: 345 STSTALTPEVVGQEHYEVATGVQHVLQRYRELQDIISILGMDELSDEE-KTIVARARRIQ 403

Query: 415 DFLKQS 420
           +FL QS
Sbjct: 404 NFLSQS 409


>gi|28625013|emb|CAD56145.1| F1F0-ATPase subunit beta [Pediococcus damnosus]
          Length = 470

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 180/379 (47%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           + +   S  + +V + +   +V    +   + +  G  V   G    +       GRV N
Sbjct: 33  IKKLDGSILVAEVALELGDGVVRTIAMDGTDGLQRGAEVEDTGSSITVPVGDKTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG  ID  +  G       I    P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGDTIDNGEEFGPEAKRNPIHRDPPKYDELNPSMEILETGIKVIDLLAPYIRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+ L+     +   +   IS+   VGER RE  +   +     + +K+ +V   
Sbjct: 153 GGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLEKTAMVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D A    +  K+ + + H++ R+ E +DI  I G     D 
Sbjct: 331 TQQGIYPAVDPLASTSSALDPAVVGEEHYKVATDVQHVLQRYRELQDIISILGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KTIVGRARRIQFFLSQN 408


>gi|22537026|ref|NP_687877.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae 2603V/R]
 gi|76786779|ref|YP_329608.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae A909]
 gi|76799295|ref|ZP_00781462.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 18RS21]
 gi|77406467|ref|ZP_00783523.1| ATP synthase F1, beta subunit [Streptococcus agalactiae H36B]
 gi|77407968|ref|ZP_00784718.1| ATP synthase F1, beta subunit [Streptococcus agalactiae COH1]
 gi|77410721|ref|ZP_00787080.1| ATP synthase F1, beta subunit [Streptococcus agalactiae CJB111]
 gi|77414099|ref|ZP_00790267.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 515]
 gi|81845446|sp|Q8E072|ATPB_STRA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573760|sp|Q3K1J5|ATPB_STRA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|22533883|gb|AAM99749.1|AE014231_7 ATP synthase F1, beta subunit [Streptococcus agalactiae 2603V/R]
 gi|76561836|gb|ABA44420.1| ATP synthase F1, beta subunit [Streptococcus agalactiae A909]
 gi|76585355|gb|EAO61946.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 18RS21]
 gi|77159851|gb|EAO70994.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 515]
 gi|77163257|gb|EAO74209.1| ATP synthase F1, beta subunit [Streptococcus agalactiae CJB111]
 gi|77173426|gb|EAO76545.1| ATP synthase F1, beta subunit [Streptococcus agalactiae COH1]
 gi|77174936|gb|EAO77749.1| ATP synthase F1, beta subunit [Streptococcus agalactiae H36B]
 gi|319744882|gb|EFV97216.1| ATP synthase F1 sector beta subunit [Streptococcus agalactiae ATCC
           13813]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 176/366 (48%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID ++   
Sbjct: 48  ALELGDGLVRTIAMESTDGLTRGLEVLDTGRAISVPVGKDTLGRVFNVLGDAIDLEEPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR L  +    +  ++ + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALTPEIVGDEHYEVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|300870200|ref|YP_003785071.1| F0F1-ATP synthase subunit alpha [Brachyspira pilosicoli 95/1000]
 gi|300687899|gb|ADK30570.1| F0F1-ATP synthase, subunit alpha [Brachyspira pilosicoli 95/1000]
          Length = 499

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/398 (23%), Positives = 163/398 (40%), Gaps = 15/398 (3%)

Query: 31  SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90
                +  L  ++   + +  +      +G    +  + +    +G    I  G  V   
Sbjct: 36  DGIARIVGL-PHIMANEMIKFECG---AIGIAFNLEEETIGAIVLGDYVGIKEGSKVSRL 91

Query: 91  GRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149
            R   +       GRV+N LG P+DG   +      + I    P   +RQ V++  +TGI
Sbjct: 92  KRILEVPVGEELLGRVVNPLGVPLDGKGDINTSKRRV-IEYPAPGIADRQAVKQPLQTGI 150

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIE 207
           + ID  TP+  GQR  +      GK+   L ++  + D     +   +G++   V   +E
Sbjct: 151 KAIDSMTPIGRGQRQLIIGDRSTGKTSIALDTIINQKDTGVICVYVAIGQKASTVAGVVE 210

Query: 208 DYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL-LILDSITRFAHS 265
                     ++VV AT+ +S  L  +AP     +AEYF  +      +I D +++ A++
Sbjct: 211 TLRQHGALDYTIVVAATASDSAPLLYIAPYAGCAMAEYFMYEEKKDTLIIYDDLSKQANA 270

Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDP 323
            R+I+      P    +P  VF    RLLER      E   G++TA+  +    +  +  
Sbjct: 271 YRQISLLLRRPPGREAFPGDVFYLHSRLLERASKLSDELGGGSLTALPIIETQDNEVSAY 330

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           I  +V SI DG I L  SL   G  P +D   SVSR+   A +   KK+  +L   +  +
Sbjct: 331 IPTNVISITDGQIYLLPSLFMSGVRPAIDVGISVSRVGGNAQTKAMKKVAGTLRLDLASY 390

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                   +G    G+D      + +   + + LKQ  
Sbjct: 391 RSLEAFSQLGI---GLDKATLAQLDRGAKMVELLKQKQ 425


>gi|291568724|dbj|BAI90996.1| ATP synthase beta chain [Arthrospira platensis NIES-39]
          Length = 485

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 190/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           GYI+ +      +     +   + + +   GKN        + +V ++  D  V    + 
Sbjct: 11  GYITQVIGPVVDIKFPDGKLPEIYNALKISGKNEAGQEISVVCEVQQLLGDNQVRSVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      GR  ++   +   GR+ N +G+PID    +   D +  I    P  
Sbjct: 71  GTDGLVRGMEATDTGRAIQVPVGSGTLGRIFNVVGEPIDNLGPV-PNDETSSIHRPAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++ +     F+TGI+V+D+  P   G +IG+F G+G+GK+ ++     +       +S+ 
Sbjct: 130 VDLETSPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   + +             K  +V    +E P  R    L+A+T+AEY
Sbjct: 190 GGVGERTREGNDLYNEMIESGVINKEDLPQSKVALVYGQMNEPPGARMRVALSALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVSKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALASKGIYPAVDPLDSSSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 SVVGEEHYQTARAVQSTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLSQP 424


>gi|226487056|emb|CAX75393.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta
           polypeptide [Schistosoma japonicum]
          Length = 517

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 187/418 (44%), Gaps = 18/418 (4%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-VIRINLDIVYICPV 75
            +     G + ++      V        + + +  +G+    + +    +  + V    +
Sbjct: 43  SSTAASTGRVVAVIGAVVDVQFDDNLPPILNALEVKGRTPRLILEIAQHLGENTVRTIAM 102

Query: 76  GIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G   V   G   I       GR++N +G+PID    + K  +   I    P 
Sbjct: 103 DGTEGLVRGQQCVDTGGPICIPVGPETLGRIMNVIGEPIDERGPI-KTKMMSGIHQDAPN 161

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
            ++    ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 162 FIDMSTEQEILETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSV 221

Query: 192 ISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
            + VGER RE  +   + +         N  K  +V    +E P  R    LT +T+AEY
Sbjct: 222 FAGVGERTREGNDLYHEMITTGVIDLKGNNSKVSLVYGQMNEPPGARARVALTGLTVAEY 281

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++  SG +P A GY  ++ +++  + ERI  +  +
Sbjct: 282 FRDQEGQDVLLFVDNIFRFTQAGSEVSALSGRIPSAVGYQPTLATDMGSMQERI--TSTK 339

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D 
Sbjct: 340 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDP 399

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +E   +   +  ++      +DI  I G     +      V +   I  FL Q 
Sbjct: 400 NIVGEEHYSVARGVQKILQENRSLQDIIAILGMDELSEED-RLTVSRARKIQRFLSQP 456


>gi|302747414|gb|ADL63188.1| Atp1 [Crossosoma californicum]
          Length = 348

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/351 (24%), Positives = 149/351 (42%), Gaps = 19/351 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V     +S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEF---SSGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKKMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + 
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELA 348


>gi|302747694|gb|ADL63328.1| Atp1 [Viola sp. Qiu 95018]
          Length = 349

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|229825576|ref|ZP_04451645.1| hypothetical protein GCWU000182_00938 [Abiotrophia defectiva ATCC
           49176]
 gi|229790139|gb|EEP26253.1| hypothetical protein GCWU000182_00938 [Abiotrophia defectiva ATCC
           49176]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 189/411 (45%), Gaps = 13/411 (3%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINL-DIVYICPVG 76
           + ++ G I  +      V    + V  + D ++        L +V      +IV    + 
Sbjct: 1   MRMKNGKIIQVMGPVVDVLFSDEDVPKIKDALIVDNHGKKCLMEVSSHQGGNIVRCIMLT 60

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +S    V   G   ++       GR+ N  G  IDG  SL + +    I  + P  
Sbjct: 61  ASEGLSRDMEVTATGSGIKVPVGEATLGRLFNVFGDTIDGGVSL-ENEEHWTIHREPPKF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
            ++    +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+ 
Sbjct: 120 SDQSPAVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIF 179

Query: 195 --VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250
             VGER RE  +   +      + K+ +V    +E P  R     T +T+AEYF  + + 
Sbjct: 180 TGVGERSREGNDLWTEMKESGVIAKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKNA 239

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++ +++  L ERI     + G++T+V
Sbjct: 240 DVLLFIDNIFRYVQAGSEVSALLGRMPSAVGYQPTLATDVGELQERIA--STKSGSVTSV 297

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      + 
Sbjct: 298 QAVYVPADDITDPAPATTFTHLDATTVLSRKIVEQGIYPAVDPLESSSRVLEADVVGEEH 357

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  ++ ++ E +DI  I G     +    + V++   I  FL Q 
Sbjct: 358 YNTARKVQEMLQKYRELQDIIAILGMEELSEAD-KQTVNRARKIQRFLSQP 407


>gi|123325577|gb|ABM74413.1| ATP synthase beta subunit [Atalantia citroides]
          Length = 466

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLXTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+I ++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSIXSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|56675712|emb|CAB64365.2| ATP synthase [Citrus x paradisi]
          Length = 477

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/388 (26%), Positives = 171/388 (44%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D + Q I +  ++        V    +   + ++ G  V   G    +       GR+
Sbjct: 45  GRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPXSVPVGGVTLGRI 104

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 105 FNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIG 163

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 164 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLSE 223

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 224 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 283

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 284 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 341

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 342 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 401

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 402 LGLDELSEED-RLTVARARKIERFLSQP 428


>gi|6017832|gb|AAF01650.1| ATP synthase beta subunit [Sargentodoxa cuneata]
          Length = 492

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 182/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 15  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQQINVTCEVQQLLGNNRVRAVAMS 74

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 75  ATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 133

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 134 IQLDTKLSIFETGIXVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 193

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 194 GGVGERTREGNDLYMEMKESGVINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEY 253

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 254 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 311

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 312 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 371

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 428


>gi|4063526|gb|AAC98321.1| ATP synthase beta subunit [Ailanthus altissima]
          Length = 456

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 169/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +   +        V    +     ++ G  V   G    +       GR+
Sbjct: 25  GRDTSGQPINVXCGVQQLLGNXRVRAVAMSATVXLTRGMEVIDTGAPLSVPVGGATLGRI 84

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 85  FNVLGEPVDNLGPVD-TRATSPIHKPAPAFIQLDTKLAIFETGIKVVDLLAPYRRGGKIG 143

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 144 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 203

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 204 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 263

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 264 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 321

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I
Sbjct: 322 ATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAI 381

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 382 LGLDELSEED-RLTVARARKIERFLSQP 408


>gi|291531909|emb|CBK97494.1| ATP synthase F1 subcomplex beta subunit [Eubacterium siraeum 70/3]
          Length = 465

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 188/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      +    +++  L + +  + +      +V   I  D V    +G  + +
Sbjct: 6   GTVVQIIGAVLDIKFPPEHLPNLLNAIEIEHEGKKLTVEVAQHIGDDTVRCIAMGSTDGL 65

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G   ++       GR+ N LG+ +D      + +   EI    P    ++ 
Sbjct: 66  VRGLPAVDTGASIKVPVGRQTLGRIFNLLGEAVDNK-PQPETEEKWEIHRPAPSFEEQEG 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 125 STQVLETGIKVVDLIAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKQHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      ++K+ +V    +E P  R    L+ +T+AEYF  K   +VLL 
Sbjct: 185 RTREGNDLYNEMTESGVIEKTTLVYGQMNEPPGARMRVALSGLTMAEYFRDKEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 245 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R+++  G +P VDPL S SR+   +    +  ++  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRNISSMGIFPAVDPLDSTSRILTPEIVGEEHYEVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R+ E +DI  I G    +D      V +   I  FL Q 
Sbjct: 363 QVQSILQRYNELQDIIAILGMD-DLDDNDKLTVSRARKIQRFLSQP 407


>gi|254517010|ref|ZP_05129068.1| flagellar protein export ATPase FliI [gamma proteobacterium NOR5-3]
 gi|219674515|gb|EED30883.1| flagellar protein export ATPase FliI [gamma proteobacterium NOR5-3]
          Length = 456

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 153/444 (34%), Positives = 241/444 (54%), Gaps = 13/444 (2%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           +Q+  + L  LA   +   +++ G +  +  +            +G+       ++    
Sbjct: 12  IQRLAQRLQTLAVQVNAPELLREGRLMRMVGMKLEAEGCDG--AIGERCRVVSGSTVVDA 69

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119
           +++    + + + P G    + LG  V   G    ++      GRVI+  G+ +DG    
Sbjct: 70  EIVGFADNRLVLMPEGDVSGLQLGARVQPLGEHASVAVDEQLFGRVIDGAGRFLDG-GPA 128

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
                 + + +K    ++R+ + +    G+R I+ F  +  GQR+G+FAGSG+GKSTLL 
Sbjct: 129 PHCSHRVALRAKALNPLDRRPIREPLDVGVRAINGFLTMGKGQRLGLFAGSGVGKSTLLG 188

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
           M  R    D +++ LVGERGREVREFIED LG   L +++VV   +D  P++R      A
Sbjct: 189 MMTRHTEADVIVVGLVGERGREVREFIEDILGPAGLARAIVVATPADYPPLMRVHGAWRA 248

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAE+F  +G +VLL++DS+TRFA + REI    GE PV++GYP SVFS LP L+ER G
Sbjct: 249 TAIAEHFRDQGRDVLLLMDSLTRFAQAQREIGLAVGEPPVSKGYPPSVFSLLPNLVERAG 308

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ITAV +VLV+GD+HNDPIAD+ R+ILDGHIVL+R +A+ G +P +D  ASVS
Sbjct: 309 NGPT--GSITAVYTVLVEGDDHNDPIADAARAILDGHIVLSRQVADSGLFPAIDLEASVS 366

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R         +++L  +L  L   + + RD+  IG Y  G D  +D+A+     +   ++
Sbjct: 367 RAMPSIAQESQQELARALKELYSVYRQNRDLISIGAYEHGSDPKIDQALRAHEPLRQLIR 426

Query: 419 QSPS-----DLSSEDVFQEITKKL 437
           Q        + S  D+   + ++L
Sbjct: 427 QPQHQKVGMEQSVNDLLN-MAQQL 449


>gi|110915584|gb|ABH02580.1| ATP synthase beta subunit [Arctagrostis latifolia]
          Length = 475

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 166/379 (43%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 37  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 96

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 97  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 155

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 156 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 215

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 216 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 275

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 276 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 333

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
             +G YP V PL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 334 XSKGIYPAVXPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 393

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 394 D-RLTVARARKIERFLSQP 411


>gi|154484982|ref|ZP_02027430.1| hypothetical protein EUBVEN_02700 [Eubacterium ventriosum ATCC
           27560]
 gi|149733935|gb|EDM50054.1| hypothetical protein EUBVEN_02700 [Eubacterium ventriosum ATCC
           27560]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 180/406 (44%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V      +  + D +         + +V   I  + V    +   E +
Sbjct: 4   GKIVQVMGPVVDVEFADNNLPYIKDALEVDNNGKRCVMEVAQHIGNNTVRCIMLAASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    +       GR+ N LG  +D  + L  G+    I    P   ++  
Sbjct: 64  HKGMEVVATGSGISVPVGEKTLGRLFNVLGDTLDNGEKLD-GEQHWCIHRDPPSFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +        S+   VGE
Sbjct: 123 VVEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELITNIATQHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   NVLL 
Sbjct: 183 RSREGNDLWTEMKESGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR L +     +  +   
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ ++ E +DI  I G     D      V++   I  FL Q 
Sbjct: 361 RVQEILQKYTELQDIISILGMEELSDED-KLVVYRARKIQKFLSQP 405


>gi|119487855|ref|ZP_01621352.1| ATP synthase F1, beta subunit [Lyngbya sp. PCC 8106]
 gi|119455431|gb|EAW36569.1| ATP synthase F1, beta subunit [Lyngbya sp. PCC 8106]
          Length = 482

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 188/421 (44%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
              GYI+ +      V     +   + + +  +G+N          +V ++  D  +   
Sbjct: 8   TNVGYITQVIGPVVDVKFSAGKMPEIYNALTIKGQNEAGQEVSVTCEVQQLLGDHQIRAV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +   + +  I    
Sbjct: 68  SMSTTDGLVRGMEVIDTGTAISVPVGPATLGRIFNVLGEPVDNLGPVN-AETTFSIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P     +     F+TGI+V+D+  P   G +IG+F G+G+GK+ ++     +       +
Sbjct: 127 PAFTELETKPAVFETGIKVLDLLAPYRRGGKIGLFGGAGVGKTVIMMELVNNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++ +             K  +V    +E P  R    L+A+ +
Sbjct: 187 SVFGGVGERTREGNDLYQEMIESGVINLEDRTKSKIALVYGQMNEPPGARMRVGLSALAM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVSKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDMGELQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT+V +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              +   D   +   ++   + R++E +DI  I G     +    + V +   I  FL Q
Sbjct: 365 LQSSVVGDEHYQTARAVQATLQRYKELQDIIAILGLDELSEED-RRTVSRARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|4995187|emb|CAB44032.1| H(+)-transporting ATP synthase [Gonystylus macrophyllus]
          Length = 473

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 4   GRISQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTXGQQINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               + +  G  V   G    +       GR+ + LG+P+D    +     +  I    P
Sbjct: 62  XXATDGLMRGMEVIDTGAPLSVPVGGATLGRIFHVLGEPVDNLGPVD-TRTTSPIHKSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIXVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVGE---RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G    R RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGARTREGNDLYMEMKESGVINEKDLAESKVALVYGQMNEPPGARMTVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|313890576|ref|ZP_07824204.1| ATP synthase F1, beta subunit [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121093|gb|EFR44204.1| ATP synthase F1, beta subunit [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGDTIDLEKPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVATEVQRVLQRYRELQDIIAILGMDELSDDE-KTLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|42558342|gb|AAS19880.1| ATP synthase beta chain [Grammitis deplanchei]
          Length = 422

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|302747626|gb|ADL63294.1| Atp1 [Roussea simplex]
          Length = 349

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 152/352 (43%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKALLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGD 212
            +      GK+ +      +                 +   +G++   V +F++    G+
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQFVQILSEGN 177

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            ++ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFIAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQ 349


>gi|224004780|ref|XP_002296041.1| F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335]
 gi|209586073|gb|ACI64758.1| F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335]
          Length = 500

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 28/444 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICP 74
           S  +    G ++ +      V    +   + + +  +      + +V   +  + V    
Sbjct: 19  SAAVSASVGRVTQVIGAVVDVQFDEKLPKILNALEVETTGDRLVLEVAQHLGENTVRTIA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130
           +   + +  G      G   ++       GR+IN +G+P+D    +    K +    +  
Sbjct: 79  MESTDGLVRGQKCTDTGAPIQVPVGPETLGRIINVIGEPVDEKGPIFTDKKMEKFAPLHR 138

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P    + + ++   TGI+V+D+  P   G +IG+F G+G+GK+ ++     +   +  
Sbjct: 139 SAPTFTEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHG 198

Query: 191 ---IISLVGERGREVREFIEDYLGDNL------------KKSVVVVATSDESPILRKMAP 235
              + + VGER RE  +   + +   +             K+ +V    +E P  R    
Sbjct: 199 GYSVFAGVGERTREGNDLYHEMIEGGVIKINKDTGSTEGSKAALVYGQMNEPPGARARVA 258

Query: 236 LTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LT + IAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L 
Sbjct: 259 LTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQ 318

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R++AE G YP VDPL
Sbjct: 319 ERI--TSTAKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPL 376

Query: 355 ASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D     D   ++  +   L+  ++  +DI  I G     +      V +   +
Sbjct: 377 DSTSRMLDPRVIGDKHYQVARATQKLLQDYKGLQDIIAILGMDELSEDD-KLVVSRARKV 435

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             F+ Q        +VF     K 
Sbjct: 436 QKFMSQP---FHVAEVFTGTAGKF 456


>gi|23503607|dbj|BAC20400.1| ATP synthase beta-subunit [Chloromonas palmelloides]
 gi|23503611|dbj|BAC20402.1| ATP synthase beta-subunit [Chloromonas rosae]
          Length = 376

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGVEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAETALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|325677814|ref|ZP_08157456.1| ATP synthase F1, beta subunit [Ruminococcus albus 8]
 gi|324110368|gb|EGC04542.1| ATP synthase F1, beta subunit [Ruminococcus albus 8]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      V    +++  L + +      +  + +V   I  D+V    +   + +
Sbjct: 7   GKVVQIVGAVVDVRFDKEHMPNLLNALEIDNNGTKLVVEVAQHIGDDVVRCIAMSSTDGL 66

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V       +        R+ N LG+P+D   +    +   EI  + P    +  
Sbjct: 67  VRGVDAVDTGKAISVPVGRATLSRMFNLLGEPVDNLPAPENAE-RWEIHREPPTYEEQTA 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+   VGE
Sbjct: 126 ANEILETGIKVIDLIAPYLKGGKIGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      + K+V+V    +E P  R    L+ +T+AEYF      +VLL 
Sbjct: 186 RTREGNDLYWEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+RS+A  G +P VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R+ E +DI  I G     D      V +   I  FL Q 
Sbjct: 364 QVQSILQRYVELQDIIAIMGMDELSDED-KLTVSRARKIQRFLSQP 408


>gi|317130747|ref|YP_004097029.1| ATP synthase F1 subunit beta [Bacillus cellulosilyticus DSM 2522]
 gi|315475695|gb|ADU32298.1| ATP synthase F1, beta subunit [Bacillus cellulosilyticus DSM 2522]
          Length = 470

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 170/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G  V        +       GRV N LG+ ID D  + 
Sbjct: 51  ALHLGDDTVRTVAMSSTDGVVRGMEVTDTAKPIAVPVGDDTLGRVFNVLGENIDLDAPIP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 DSVRRDPIHRQAPVYEELSTETEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      + K+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVINKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 231 SGLTMAEYFRDEKGADVLLFIDNIFRFTQAGGEVSALLGRMPSAVGYQPTLATEMGMLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 348

Query: 356 SVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +  ++   +   + +++E +DI  I G     +      VH+   I 
Sbjct: 349 STSRALSPEVCGDEHYEVARQVQQTLQKYKELQDIIAILGMDELSEDD-KLTVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|34539325|gb|AAQ74546.1| F1-ATPase alpha subunit [Heteranthera rotundifolia]
          Length = 367

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 84/364 (23%), Positives = 148/364 (40%), Gaps = 19/364 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V +   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 6   SGVKGIALXLENENVGVVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 66  GRGALSDHE-RRXVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 124

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 125 TAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAA 184

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 185 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 244

Query: 283 PTSVFSELPRLLERIGPSEK--EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER          G+ TA+  +     + +  I  +V  I DG I    
Sbjct: 245 PGDVFYLHSRLLERAAKRSDLTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSET 304

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 305 ELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLD 361

Query: 401 LILD 404
               
Sbjct: 362 AATQ 365


>gi|332980984|ref|YP_004462425.1| ATP synthase F1 subcomplex subunit beta [Mahella australiensis 50-1
           BON]
 gi|332698662|gb|AEE95603.1| ATP synthase F1 subcomplex beta subunit [Mahella australiensis 50-1
           BON]
          Length = 472

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 116/419 (27%), Positives = 195/419 (46%), Gaps = 16/419 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQ-VIRINLDIVYICPVGIGEEI 81
           G++ SI      +   + Y+  L + +     N   + +    +  D+V    +   + +
Sbjct: 10  GHVISIIGPVVDIRFNNGYLPNLNNALEISADNRKVVVETAQYLGSDVVRCIALASTDGL 69

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G   ++       GR+ N LG+PID    +   D  M I  + P    +Q 
Sbjct: 70  QRGMEAADTGGPIKVPVGRGVLGRLFNVLGQPIDDSGDVEATDY-MPIHREAPAFSEQQP 128

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
           V + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     I + VGE
Sbjct: 129 VSQVFETGIKVVDLLAPYPRGGKIGLFGGAGVGKTVLIMELIHNIATEHGGFSIFTGVGE 188

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  E   +     +  K+ +V    +E P  R    LT +T+AEYF   +  +VL+ 
Sbjct: 189 RTREGNELWNEMKESGVLDKTAMVFGQMNEPPGARMRVALTGLTLAEYFRDVEHQDVLMF 248

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  ++  L ERI  +  + G+IT+V +V V
Sbjct: 249 IDNIFRYVQAGSEVSALLGRMPSAVGYQPTLAQDVGSLEERI--TSTKSGSITSVQAVYV 306

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVS 374
             D+  DP   ++ + LD   VL+R + E G YP VDPL+S SR+ D      +      
Sbjct: 307 PADDLTDPAPAAIFAHLDAMTVLSRDIVEMGIYPAVDPLSSTSRILDARILGEEHYNTAR 366

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            +  ++ R++E +DI  I G     D      V++   I  FL Q     S  + F  I
Sbjct: 367 HVQEILERYKELQDIIAILGIEELSDND-KLTVYRARKIQRFLSQP---FSVAESFTGI 421


>gi|158602241|gb|ABW74587.1| ATP synthase beta subunit [Aconitum napellus]
          Length = 478

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 30  KGQDTIGQQINVTCEVQQLLGNNKVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D             I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 90  IFNVLGEPVDNXGX-XXXXXXXPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 148

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 149 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIA 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 209 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQAGSEVSAL 268

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 269 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 326

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 327 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 386

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 387 ILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|33601562|ref|NP_889122.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica
           RB50]
 gi|33575998|emb|CAE33078.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica
           RB50]
          Length = 491

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 151/457 (33%), Positives = 233/457 (50%), Gaps = 31/457 (6%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S    +  G I+    +    T L   V     + + +G +     +V+  +   +
Sbjct: 30  IRAASTEPWLVSGRITRAAGLVLHATGLRLPVGAACRIELARGHDHWADAEVVGFDGHTL 89

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 90  YLMPQSDISGLPPGARVVPAEPAVQRPVPLPRKAELNGNAKPQVGRHLPVGNAMLGRVVD 149

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG   L   + +  + +     ++R  ++     G+R I+    +  GQR+G+F
Sbjct: 150 GAGRPLDGLGPLAGAEQA-PLTALPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLF 208

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D 
Sbjct: 209 AGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADV 268

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+LR      A  +AE+F  +G +VLLI+DS+TRFA + REIA   GE P  +GYP SV
Sbjct: 269 SPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPATKGYPPSV 328

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G        + G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R L
Sbjct: 329 FAKLPALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHL 388

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      + ++ + V     ++ R++  RD+  +G Y  G D  
Sbjct: 389 AEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGAYVAGADPQ 448

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEITKKLQ 438
           LD A+ + P +  +L+Q+  D         ++ + L+
Sbjct: 449 LDDAIARYPRLEAYLQQNIGDSVDYGTAIDQLQRSLE 485


>gi|302747562|gb|ADL63262.1| Atp1 [Ochna serrulata]
          Length = 349

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|114216082|gb|ABI54652.1| ATPase alpha subunit [Leiomylia anomala]
          Length = 344

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 82/342 (23%), Positives = 147/342 (42%), Gaps = 16/342 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +
Sbjct: 2   GMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGA 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           L   +    +  K P  + R+ V +  +TG++ +D   P+  G R  +      GK    
Sbjct: 62  LSAVE-RRRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGXRELIIGDRQTGKTAIA 120

Query: 175 -STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
             T+L+    +            +   +G++   V + ++        + S++V AT+ +
Sbjct: 121 IDTILNQKQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASD 180

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ + + R+++      P    +P  V
Sbjct: 181 PAPLQFLAPYSGRAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDV 240

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 241 FYLHSRLLERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY 300

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            G  P ++   SVSR+   A     K++  S    + ++ E 
Sbjct: 301 RGSRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREV 342


>gi|112791396|gb|ABI21968.1| ATP synthase beta subunit [Pectobacterium cypripedii]
          Length = 426

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 174/366 (47%), Gaps = 13/366 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V    +  ++       GR++N LG+PID    L + D
Sbjct: 22  LGGGVVRTIAMGTSDGLKRGLEVTDLKKPIQVPVGKATLGRIMNVLGEPIDMKGDLKEED 81

Query: 124 LSM----EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            S      I    P    +   ++  +TGI+VID+  P   G ++G+F G+G+GK+  + 
Sbjct: 82  GSAVEVSSIHRAAPSYEEQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 141

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
              R+   +     + + VGER RE  +F  +    N + K  +V    +E P  R    
Sbjct: 142 ELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVA 201

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L E
Sbjct: 202 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 261

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT+V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL 
Sbjct: 262 RI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLD 319

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR  D      +   +   +  L+ R++E +DI  I G     +      V +   I 
Sbjct: 320 STSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDIIAILGMDELSEDD-KLLVARARKIQ 378

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 379 RFLSQP 384


>gi|42558338|gb|AAS19878.1| ATP synthase beta chain [Grammitis billardierei]
 gi|42558340|gb|AAS19879.1| ATP synthase beta chain [Grammitis ciliata]
 gi|42558354|gb|AAS19886.1| ATP synthase beta chain [Grammitis pseudociliata]
          Length = 422

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|42558358|gb|AAS19888.1| ATP synthase beta chain [Grammitis poeppigiana]
          Length = 422

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|12004131|gb|AAG43905.1|AF213774_1 ATP synthase beta subunit [Anagallis arvensis]
          Length = 413

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/361 (27%), Positives = 165/361 (45%), Gaps = 18/361 (4%)

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
           P+   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 4   PMSATKGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 62

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 63  PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELITNIAKAHGGV 122

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 123 SVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTM 182

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 183 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 240

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 241 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 300

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  ++   +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 301 LQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 359

Query: 420 S 420
            
Sbjct: 360 P 360


>gi|289524784|emb|CBJ94448.1| alpha subunit of ATPase [Vibrio sp. Vb 11.8]
 gi|289524792|emb|CBJ94452.1| alpha subunit of ATPase [Vibrio sp. Cmf 11.16]
          Length = 419

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/408 (23%), Positives = 172/408 (42%), Gaps = 26/408 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G         + +N D V    +G   ++  G  V   GR   +       
Sbjct: 1   MQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEML 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  +      GK+ +   ++  + D     I   +G++   +   +           +VV
Sbjct: 117 RELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIAD 326
             +P  VF    RLLER     +               G++TA+  +     + +  +  
Sbjct: 237 EAFPGDVFYLHSRLLERAARVSEVYVERFTNGEVTGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE- 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 --LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 399


>gi|223038732|ref|ZP_03609025.1| ATP synthase F1, beta subunit [Campylobacter rectus RM3267]
 gi|222880134|gb|EEF15222.1| ATP synthase F1, beta subunit [Campylobacter rectus RM3267]
          Length = 465

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 192/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G IS +      V        + + V      +GK +  + +V     D  V    + + 
Sbjct: 3   GIISQVMGPVVDVDFTDYLPKINEAVEVNFEVEGKQNRLVLEVAAHLGDNRVRTIAMDMS 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G      G    +       GR+ N +G  ID  + + + D    I    PP   
Sbjct: 63  EGLTRGLEATALGAPISVPVGEKVLGRIFNVVGDLIDEGEGI-EFDKKWSIHRDPPPFEE 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGAEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPQILGGEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQAVLQKYKDLQDIIAILGMDELSEED-KVTVDRARKIERFLSQP 407


>gi|63253131|dbj|BAD98322.1| beta subunit of ATP synthesis [Arthropteris backleri]
          Length = 464

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 110/433 (25%), Positives = 190/433 (43%), Gaps = 25/433 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQV 62
           + L+ + S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V
Sbjct: 4   SSLSFEISELVEKNVGYITQIIGPVLDVASSPGKMPNIYNSLVVRGRNPAGQQIDVTCEV 63

Query: 63  IRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            ++  +  V    +   + +  G      G    +       GR+ N LG+P+D    + 
Sbjct: 64  QQLLGNNEVRAVAMSATDGLMRGMGAIDTGAPLTVPVGETTLGRISNVLGEPVDNLGPV- 122

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +   +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++ 
Sbjct: 123 QSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITE 182

Query: 181 FARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPI 229
              +       +S+ G   ER RE  +   +               K  +V    +E P 
Sbjct: 183 SINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPG 242

Query: 230 LRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288
            R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +
Sbjct: 243 ARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGT 302

Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
           E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G Y
Sbjct: 303 EMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIY 360

Query: 349 PPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407
           P VDPL S S +        +  +    +   + R++E +DI  I G     +      V
Sbjct: 361 PAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTV 419

Query: 408 HQVPIIYDFLKQS 420
            +   I  FL Q 
Sbjct: 420 ARARKIERFLSQP 432


>gi|17224713|gb|AAL37078.1| ATP synthase beta subunit [Dioscorea lanata]
          Length = 471

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K     GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 32  KGRXXXGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGVTLGR 91

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 92  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 150

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 151 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNIA 210

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 211 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 270

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 271 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 328

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 329 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQKVKQTSQRYKELQDIIA 388

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 389 ILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|167750158|ref|ZP_02422285.1| hypothetical protein EUBSIR_01127 [Eubacterium siraeum DSM 15702]
 gi|167656901|gb|EDS01031.1| hypothetical protein EUBSIR_01127 [Eubacterium siraeum DSM 15702]
 gi|291556548|emb|CBL33665.1| ATP synthase F1 subcomplex beta subunit [Eubacterium siraeum
           V10Sc8a]
          Length = 465

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 187/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      +    +++  L + +  + +      +V   I  D V    +G  + +
Sbjct: 6   GTVVQIIGAVLDIKFPPEHLPNLLNAIEIEHEGKKLTVEVAQHIGDDTVRCIAMGSTDGL 65

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G   ++       GR+ N LG+ +D      + +   EI    P    ++ 
Sbjct: 66  VRGLPAVDTGASIKVPVGRQTLGRIFNLLGEAVDNK-PQPETEEKWEIHRPAPSFEEQEG 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 125 STQVLETGIKVVDLIAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKQHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      ++K+ +V    +E P  R    L+ +T+AEYF  K   +VLL 
Sbjct: 185 RTREGNDLYNEMTESGVIEKTTLVYGQMNEPPGARMRVALSGLTMAEYFRDKEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V
Sbjct: 245 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAWSADEKKLVS 374
             D+  DP   +  + LD   VL+R+++  G +P VDPL S SR+   +    +  ++  
Sbjct: 303 PADDLTDPAPATTFAHLDATTVLSRNISSMGIFPAVDPLDSTSRILTPEIVGEEHYEVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R+ E +DI  I G     D      V +   I  FL Q 
Sbjct: 363 QVQSILQRYNELQDIIAILGMDELDDND-KLTVSRARKIQRFLSQP 407


>gi|95929971|ref|ZP_01312711.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684]
 gi|95133940|gb|EAT15599.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/363 (30%), Positives = 181/363 (49%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G +  +       GR++N +G+P+D    + + D
Sbjct: 52  LGENTVRAIAMDSTEGLVRGQEVLATGDQIVMPVGRKTLGRILNVVGEPVDEAGPV-EAD 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L   I    P  +N+    + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 111 LQWGIHRPAPEFVNQSTKVESFETGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +  E+     +  K+ +V    +E P  R    L+A+
Sbjct: 171 NIAQQHGGFSVFAGVGERTREGNDLWEEMKESGVLDKAALVYGQMNEPPGARARVALSAL 230

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 231 TVAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGELQERI- 289

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S
Sbjct: 290 -TTTDKGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSSS 348

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  KL   +  ++ R+++ +DI  I G     +    + V +   I  FL
Sbjct: 349 RILDPQVVGEEHYKLARDVQFVLQRYKDLQDIIAILGMDELSEDD-KQVVARARKIQRFL 407

Query: 418 KQS 420
            Q 
Sbjct: 408 SQP 410


>gi|289524786|emb|CBJ94449.1| alpha subunit of ATPase [Vibrio sp. C15.18]
 gi|289524788|emb|CBJ94450.1| alpha subunit of ATPase [Vibrio sp. Cmf 5.9]
 gi|289524790|emb|CBJ94451.1| alpha subunit of ATPase [Vibrio sp. Cmf 6.5]
 gi|289524794|emb|CBJ94453.1| alpha subunit of ATPase [Vibrio sp. Rd 14.3]
          Length = 406

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/408 (23%), Positives = 173/408 (42%), Gaps = 26/408 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G         + +N D V    +G   ++  G  V   GR   +       
Sbjct: 1   MQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEML 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  +      GK+ +   ++  + D     I   +G++   +   +           +VV
Sbjct: 117 RELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIAD 326
             +P  VF    RLLER     +             + G++TA+  +     + +  +  
Sbjct: 237 EAFPGDVFYLHSRLLERAARVSEVYVERFTNGEVTGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE- 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
             +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 --LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 399


>gi|150187345|emb|CAK30233.1| ATP synthase alpha subunit [Streptococcus parasanguinis ATCC 15912]
          Length = 367

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 159/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ ++ +  +    G    +    V I  +G   +I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLIFENGS---YGMAQNLETTDVGIIILGDFTDIREGDSVRRTGKIM 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV+N LG+P+DG   +   D    + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPAGDALIGRVVNPLGQPVDGLGEIV-TDKFRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDTILNQKGQDMICIYVAIGQKESTVRTQVETLRK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGAMDYTIVVTASASQPSPLLYLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPIIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L  SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLQDSLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|194379304|dbj|BAG63618.1| unnamed protein product [Homo sapiens]
          Length = 531

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 91/413 (22%), Positives = 167/413 (40%), Gaps = 42/413 (10%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + SI      V  L + V   + V     +S   G  + +  D V +   G  + I
Sbjct: 70  ETGRVLSIGDGIARVHGL-RNVQAEEMVEF---SSGLKGMSLNLEPDNVGVVVFGNDKLI 125

Query: 82  SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
             GD+V   G     P                              +  K P  + R  V
Sbjct: 126 KEGDIVKRTGAIVDVPIGS----------------------KTRRRVGLKAPGIIPRTSV 163

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK-----STLLSMFARSDCFD-----KVI 191
            +  +TGI+ +D   P+  GQR  +      GK      T+++    +D  D       I
Sbjct: 164 REPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGSDEKKKLYCI 223

Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
              +G++   V + ++     D +K ++VV AT+ ++  L+ +AP +  ++ EYF   G 
Sbjct: 224 YVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGK 283

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNIT 308
           + L+I D +++ A + R+++      P    YP  VF    RLLER    +     G++T
Sbjct: 284 HALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMDDAFGGGSLT 343

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           A+  +     + +  I  +V SI DG I L   L  +G  P ++   SVSR+   A +  
Sbjct: 344 ALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRA 403

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            K++  ++   + ++ E   +     +   +D    + + +   + + LKQ  
Sbjct: 404 MKQVAGTMKLELAQYRE---VAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQ 453


>gi|149384417|gb|ABR25031.1| ATP synthase beta chain [Asplenium auritum var. rigidum]
          Length = 426

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G   +   G   +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAIDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|157737829|ref|YP_001490513.1| F0F1 ATP synthase subunit beta [Arcobacter butzleri RM4018]
 gi|315637619|ref|ZP_07892825.1| ATP synthase F1 sector beta subunit [Arcobacter butzleri JV22]
 gi|226739974|sp|A8EV70|ATPB_ARCB4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157699683|gb|ABV67843.1| ATP synthase F1 sector, beta subunit [Arcobacter butzleri RM4018]
 gi|315478073|gb|EFU68800.1| ATP synthase F1 sector beta subunit [Arcobacter butzleri JV22]
          Length = 464

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/408 (26%), Positives = 180/408 (44%), Gaps = 14/408 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           G +  +      V        +    D  +        + +V     D  V    + + E
Sbjct: 3   GKVIQVMGPVVDVEFDGYLPEINEAIDVTLADASKDRLVLEVAAHIGDSRVRTIAMDMTE 62

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G      G   ++       GR+ N +G P+D   ++        I    P    +
Sbjct: 63  GLVRGQECIATGGPIKVPVGEAVLGRIFNVIGDPVDEGSAIPADTERWSIHRSAPTFEEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLV 195
               + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + V
Sbjct: 123 STKTEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGV 182

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   +    N+  K  +      E P  R    LT +T+AEYF  +   +VL
Sbjct: 183 GERTREGNDLYHEMKDSNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           + +D+I RFA S  E++   G +P A GY  ++ SE+ +L ERI  +   KG+IT+V +V
Sbjct: 243 MFIDNIFRFAQSGSEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTSKGSITSVQAV 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+        +    
Sbjct: 301 YVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSADIIGQEHYNT 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 361 ARGVQSVLQKYKDLQDIIAILGMDELSESD-KLVVARARKIERFLSQP 407


>gi|28188333|gb|AAL92546.1| ATP synthase beta subunit [Chaetosphaeridium globosum]
          Length = 402

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMDVIDTGSALSVPVGEVTLGRIFNVLGEPVDNMGPVNAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLGESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|90409081|ref|ZP_01217205.1| ATP synthase subunit B [Psychromonas sp. CNPT3]
 gi|90309808|gb|EAS37969.1| ATP synthase subunit B [Psychromonas sp. CNPT3]
          Length = 465

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 19/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +  G I  I      V    Q +  +   ++   KN     Q  +I   +V    +G  E
Sbjct: 1   MSSGKIVQIIGAVVDVEFSQQDIPNIYSALIVTEKNLTMEVQ-QQIGGGVVRCIAMGATE 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V        +       GR++N LG+P+D    +   +   EI  + P    +
Sbjct: 60  GLRRGLEVTDTKHAITVPVGTATLGRILNVLGEPVDECGPVEATE-HYEIHREAPSYEEQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                  + GI+VID+  P   G +IG+F G+G+GK+  +     +         + + V
Sbjct: 119 AISVDTLEVGIKVIDLICPFARGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +F  +     +         K  +V    +E P  R    LT +T+AE F  
Sbjct: 179 GERTREGNDFYYEMQEAGVVNVENPELSKVAMVYGQMNEPPGCRLRVALTGLTMAERFRD 238

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
           +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+I
Sbjct: 239 EGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKLGSI 296

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD  IVL+R +A  G YP +DPL S SR+ D     
Sbjct: 297 TSIQAVYVPADDLTDPSPATTFAHLDATIVLSRQIASLGLYPAIDPLDSTSRMLDPLVVG 356

Query: 368 -DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +   +  ++ R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 357 QEHYDIARGVQSILQRYKELKDIIAILGMDELSEED-KQIVSRARKVEKFLTQP 409


>gi|39995224|ref|NP_951175.1| F0F1 ATP synthase subunit beta [Geobacter sulfurreducens PCA]
 gi|81832140|sp|Q74GY0|ATPB_GEOSL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|39981986|gb|AAR33448.1| ATP synthase F1, beta subunit [Geobacter sulfurreducens PCA]
 gi|298504228|gb|ADI82951.1| ATP synthase F1, beta subunit [Geobacter sulfurreducens KN400]
          Length = 470

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/416 (25%), Positives = 188/416 (45%), Gaps = 18/416 (4%)

Query: 19  LVVQGGYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVY 71
           +    G IS +      V         +     V +   +      V+     +  + V 
Sbjct: 1   MSQNFGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENAVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G+   +       GR++N +G+P+D    +   +    I  
Sbjct: 61  TIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVN-AEKEYGIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  +++    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 120 EAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHG 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +     +  K+ +V    +E P  R    L+A++IAEYF 
Sbjct: 180 GFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFR 239

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG
Sbjct: 240 DEEGQNVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTTKG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 298 SITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 358 IGEEHYSIARQVQYVLQKYKDLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 412


>gi|11559338|dbj|BAB18827.1| ATP synthase beta-subunit [Volvulina steinii]
          Length = 376

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMG-IVKVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|4519284|dbj|BAA75557.1| ATP synthase beta-subunit [Pleodorina californica]
          Length = 376

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|302747356|gb|ADL63159.1| Atp1 [Begonia sp. Qiu 05009]
          Length = 349

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|256077755|ref|XP_002575166.1| ATP synthase beta subunit [Schistosoma mansoni]
 gi|238660396|emb|CAZ31399.1| ATP synthase beta subunit, putative [Schistosoma mansoni]
          Length = 517

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/413 (25%), Positives = 184/413 (44%), Gaps = 18/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ-VIRINLDIVYICPVGIGEE 80
             G + ++      V        + + +  +G+    + +    +  + V    +   E 
Sbjct: 48  STGRVVAVIGAVVDVQFDDNLPPILNALEVKGRTPRLILEIAQHLGENTVRTIAMDGTEG 107

Query: 81  ISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G   V   G  RI       GR++N +G+PID    + K  +   I    P  +   
Sbjct: 108 LVRGQQCVDTGGPIRIPVGPETLGRIMNVIGEPIDERGPI-KTKMMSGIHQDAPDFIEMS 166

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 167 TEQEILETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVG 226

Query: 197 ERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ER RE  +   + +         N  K  +V    +E P  R    LT +T+AEYF  + 
Sbjct: 227 ERTREGNDLYHEMITTGVIDLKGNNSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQE 286

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +   KG+IT
Sbjct: 287 GQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTRKGSIT 344

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D     +
Sbjct: 345 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGE 404

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E   +   +  ++      +DI  I G     +      V +   I  FL Q 
Sbjct: 405 EHYSVARGVQKILQENRSLQDIIAILGMDELSEED-RLTVSRARKIQRFLSQP 456


>gi|42559026|gb|AAS20199.1| ATP synthase beta subunit [Kingia australis]
          Length = 413

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +     R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|113910918|gb|ABI48191.1| ATPase beta subunit [Lycopodium clavatum var. clavatum]
          Length = 416

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 3   KGKNPAGQEINLTCEVQQLLGNNKVRAVAMSATDGLKRGLEVIDTGAPLSVPVGEATLGR 62

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +  G  S  I    P           F+TGI+V+D   P   G +I
Sbjct: 63  IFNVLGEPVDSLGPVDVGTTS-PIHRNAPAFAQLDTKLSIFETGIKVVDPLAPYRRGGKI 121

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 122 GLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 181

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 182 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 241

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 242 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 299

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S   +       +   +    +   + R++E +DI  
Sbjct: 300 DATTVLSRGLAAKGIYPAVDPLDSTPTMLQPWIVGEQHYETAQEVKQTLQRYKELQDIIA 359

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 360 ILGLDELSEED-RLTVARARKIERFLSQP 387


>gi|584797|sp|P37399|ATPBM_DAUCA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|18322|emb|CAA42844.1| ATP synthase b subunit [Daucus carota]
          Length = 547

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 180/411 (43%), Gaps = 20/411 (4%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  I      V     L   +   + +  + +    +   +    + V    +   E 
Sbjct: 81  GQVCQIIGAVVDVKFEEGLPPIMTALEVIDFEIRLVLEVAPSLG--ENTVRTIAMDGTEG 138

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    I       GR+IN +G+PID    + K D  + I  + P  +++ 
Sbjct: 139 LVRGQKVLNTGAPITIPVGRATLGRIINVIGEPIDHRGEI-KTDQYLPIHREAPTFVDQA 197

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
             ++   TGI+V+D+  P   G +IG+F G  +GK+ L+     +      + + VGER 
Sbjct: 198 TEQQILVTGIKVVDLLAPYQKGGKIGLFGGDWVGKTVLIMELINNVAKAHAVFAGVGERT 257

Query: 200 REVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
           RE  +  ++ +              K  +V    +E P  R    LT +T+AE+F     
Sbjct: 258 REGNDLYKEMMESGVIKLGDQQAESKCALVYGQMNEPPGSRARVGLTGLTVAEHFRDAEG 317

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
           ++VLL +D   RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT+
Sbjct: 318 EDVLLFVDKRFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITS 375

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+       + 
Sbjct: 376 VQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLTPESGEEH 435

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 436 YNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 485


>gi|302341729|ref|YP_003806258.1| ATP synthase F1, subunit beta [Desulfarculus baarsii DSM 2075]
 gi|301638342|gb|ADK83664.1| ATP synthase F1, beta subunit [Desulfarculus baarsii DSM 2075]
          Length = 469

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 197/430 (45%), Gaps = 21/430 (4%)

Query: 21  VQGGYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYIC 73
           +  G I+ +      V         +     V ++G N      V+     +  ++V   
Sbjct: 1   MSVGKITQVIGPVIDVEFPEGELPEILTALLVTNKGINDQEDNLVVEVAQHLGDNVVRCI 60

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            + + E +  G  V + G+  ++       GRV+N +G+P+DG   +   +    I    
Sbjct: 61  AMDVTEGLQRGLPVKNTGKPIQMPVGDAILGRVLNVVGRPVDGLGPVNAKEY-FPIHRPA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-- 190
           P  +++       +TG++VID+  P   G ++G+F G+G+GK+ ++     +        
Sbjct: 120 PSLVDQDTSVNVLETGVKVIDLLVPFPRGGKMGMFGGAGVGKTVIMMEMIHNIAMQHGGI 179

Query: 191 -IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            + + VGER RE  +   +      + K+ +V     E P  R    ++A+T AEY+   
Sbjct: 180 SVFAGVGERTREGNDLYHEMKDSGVISKAALVYGQMTEPPGARARVAISALTTAEYYRDV 239

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+I
Sbjct: 240 QGQDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGELQERI--TSTTKGSI 297

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T+V  V V  D+  DP   +  + LDG +VL+R ++E G YP VDPL S SR+ D  +  
Sbjct: 298 TSVQCVYVPADDLTDPAPATTFAHLDGTVVLSRQISELGIYPAVDPLDSTSRILDPNYLG 357

Query: 368 DEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           +E   +   +  ++ ++++ +DI  I G     D      VH+   I  FL Q       
Sbjct: 358 EEHYGVARKVQMILQKYKDLQDIIAILGMDELSDED-KITVHRARRIQRFLSQP---FHV 413

Query: 427 EDVFQEITKK 436
            +VF  +   
Sbjct: 414 AEVFTGMAGA 423


>gi|291286803|ref|YP_003503619.1| ATP synthase F1, beta subunit [Denitrovibrio acetiphilus DSM 12809]
 gi|290883963|gb|ADD67663.1| ATP synthase F1, beta subunit [Denitrovibrio acetiphilus DSM 12809]
          Length = 467

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 185/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      V     Q   + + +     +   + +V   +  +IV    +   E +
Sbjct: 6   GKVVQVIGPVIDVKFETGQLPEIYNALEVTIGDHTVICEVEQHLGENIVRTVAMSSTEGL 65

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G+           GR+IN  G P+D    L + +    I    P   ++  
Sbjct: 66  VRGSQAKDTGQAITAPVGKNVLGRIINVTGDPVDEAGPL-ETETRWPIHRPAPTLEDQDT 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G + G+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 125 GTEILETGIKVIDLLEPYTKGGKTGLFGGAGVGKTVLIMELINNIAQEHGGYSVFAGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE ++ +E+      + K  +V    +E P  R    LT +T+AEYF  +   +VLL 
Sbjct: 185 RTREGKDLLEEMEESGVISKVALVYGQMNEPPGARMRVALTGLTVAEYFRDEEGQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 245 VDNIFRFSQAGSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTSKGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + +D   VL+R +AE G YP VDPL S SR+ D      +   +  
Sbjct: 303 PADDLTDPAPATTFAHIDATTVLSRQIAELGIYPAVDPLDSTSRILDPGVVGEEHYAVAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     +      V +   I  FL Q 
Sbjct: 363 GVQAVLQKYKELQDIIAILGMEELTEED-KMTVARARKIQRFLSQP 407


>gi|154424961|emb|CAL18583.1| ATP synthase alpha subunit [Streptococcus parasanguinis]
 gi|154424963|emb|CAL18584.1| ATP synthase alpha subunit [Streptococcus parasanguinis]
          Length = 367

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 159/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ ++ +  +    G    +    V I  +G   +I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLIFENGS---YGMAQNLETTDVGIIILGDFTDIREGDSVRRTGKIM 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV+N LG+P+DG   +   D    + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPAGDALIGRVVNPLGQPVDGLGEIV-TDKFRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDTILNQKGQDMICIYVAIGQKESTVRTQVETLRK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGAMDYTIVVTASASQPSPLLYLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPIIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L  SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLQDSLFNAGIRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|119350473|gb|ABL63187.1| AtpB [Chlorella sorokiniana]
          Length = 389

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   D  + I
Sbjct: 2   VRAVAMSATDGLMRGMEVVDSGKPLNVPVGQATLGRIFNVLGEPVDNLGPVNTKDQ-LPI 60

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 61  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 120

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 121 HGGVSVFGGVGERTREGNDLYMEMKESGVINESNISESKVALVYGQMNEPPGARMRVGLT 180

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 181 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 240

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 241 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDS 298

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 299 TSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 357

Query: 416 FLKQS 420
           FL Q 
Sbjct: 358 FLSQP 362


>gi|86438838|emb|CAJ43384.1| ATP synthase alpha subunit [Lactobacillus helveticus]
          Length = 364

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 13/364 (3%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGR 104
           G+ +     +    G    ++   V I  +G  + I  GD V   GR   +       GR
Sbjct: 8   GELLKFDNGS---YGIAQNLDSSDVGIIILGQFDNIREGDRVQRTGRIMSVPVGDALIGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG+P+DG   + K D +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR 
Sbjct: 65  VVNPLGQPVDGLGEI-KSDKTRPIEEKAPGVMDRQSVNQPLQTGIKAIDALAPIGRGQRE 123

Query: 165 GVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
            +      GK+   + ++  + +     I   +G++   VR  +E       +  ++VV 
Sbjct: 124 LIIGDRKTGKTSLAIDTILNQKNQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVE 183

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A   E   +  +AP     + E F   G +VL++ D +++ A + RE++      P    
Sbjct: 184 AGPSEPAPMLYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREA 243

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      +   G++TA+  +  +  + +  I  +V SI DG I L 
Sbjct: 244 YPGDVFYLHSRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQ 303

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P +D   SVSR+   A     KK+  +L   +  + E       G     +
Sbjct: 304 SDLFFAGTRPAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAYRELESFAQFG---SDL 360

Query: 400 DLIL 403
           D   
Sbjct: 361 DQAT 364


>gi|56236584|gb|AAV84659.1| ATP synthase beta subunit [Cephalotaxus harringtonia]
          Length = 423

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +G    S 
Sbjct: 2   NKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGETTLGRIFNVLGEPVDDLGPVGALTTS- 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +  ++               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLIVSRARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|6561611|gb|AAF16955.1|AF197623_1 ATPase alpha subunit [Cycas revoluta]
          Length = 403

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 84/405 (20%), Positives = 152/405 (37%), Gaps = 23/405 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V   S  +  G+ V      S   G  +    + V I   G    I  GDLV   G   
Sbjct: 1   RVYG-SNEIQAGEMVEFA---SGVKGIALNPENENVGIVVSGSDTAIKEGDLVKRTGSIV 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPVGKAMLGRVVDALGVPIDGKGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----------FDKVIISLVGERGREV 202
              P+  GQR  +      GK+ +      +                 +   +G++    
Sbjct: 116 SPVPIGRGQREPIIGDRQTGKTAIAIDTISNQKRMNSKGTSDSEKLYRVYVAIGQKRSTA 175

Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
            + ++   G D  +  ++V AT+ +   L+ +AP       EYF   G +  +I D  ++
Sbjct: 176 AQLVQILSGADASEYPIIVAATASDPAPLQFLAPYPGCAAGEYFRDNGMHASIIYDDPSK 235

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDN 319
            A + R+++      P    +P  V     R  ER      +   G++TA+  +     +
Sbjct: 236 QAVAYRQMSLLLRRPPGREAFPGDVLYLHSRPSERAAKRSDQTGAGSLTALPVIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  I  +V  I DG I     L   G  P ++   SVSR+   A     +++  S    
Sbjct: 296 VSAYIPTNVIPITDGQIRSETELFYRGIRPAINVGLSVSRVGSAAQLKAMRQVRGSSKPE 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424
           + ++ E   +         +D       ++   + +  KQ     
Sbjct: 356 LAQYRE---VAASAQSGSDLDAATQAPSNRGARLTEVPKQPQYPP 397


>gi|62902875|gb|AAY19352.1| ATP synthase beta subunit [Rinorea pubiflora]
          Length = 479

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRTVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMXESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP      +  D    L+R LA +G YP VDPL S S + 
Sbjct: 298 TXEGSITSIQAVXVPADDLTDPAPAXXFAHXDAXTXLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEZD-RLTVARARKIERFLSQP 416


>gi|123325631|gb|ABM74440.1| ATP synthase beta subunit [Citrus limonia]
          Length = 429

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 170/379 (44%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG+P+D
Sbjct: 4   NVTCEVQQLLGNNRVRFVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVD 63

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 64  NLGPVD-TRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 122

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 123 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLSESKVALVYGQ 182

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 183 MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 242

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 243 QPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 300

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 301 AAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEE 360

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 361 D-RLTVARARKIERFLSQP 378


>gi|149798693|gb|ABR32037.1| ATP synthase beta chain [Hecistopteris pumila]
          Length = 426

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF       +L  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149071996|ref|YP_001293559.1| ATP synthase subunit B [Rhodomonas salina]
 gi|190358718|sp|A6MVY0|ATPB_RHDSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|134302947|gb|ABO70751.1| ATP synthase subunit B [Rhodomonas salina]
          Length = 471

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 182/419 (43%), Gaps = 24/419 (5%)

Query: 18  NLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           N     G+I+ I      +     +   + + V+     SD   +V ++  +  V    +
Sbjct: 3   NTATNTGFITQIIGPVIDIEFPNGKLPPIYNSVIV----SDVTCEVQQLLGNNRVRAVSM 58

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V        +       GR+ N LG P+D    +   + ++ I    P 
Sbjct: 59  TSTDGLKRGMEVTDLNAPISVPVGKSTLGRIFNVLGVPVDEMGEVSM-ETTLPIHRLSPR 117

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
               +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 118 FTELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 177

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 178 FGGVGERTREGNDLYMEMKESGVINASNLSESKVALVYGQMNEPPGARMRVGLTALTMAE 237

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 238 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TST 295

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP   +  S LD   VL+R+LA +G YP VDPL S S +  
Sbjct: 296 REGSITSIQAVYVPADDLTDPAPATTFSHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQ 355

Query: 363 -KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                ++       +   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 356 INIVGSEHYDTAQDVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQP 413


>gi|228478238|ref|ZP_04062846.1| ATP synthase F1, beta subunit [Streptococcus salivarius SK126]
 gi|312864308|ref|ZP_07724542.1| ATP synthase F1, beta subunit [Streptococcus vestibularis F0396]
 gi|322517276|ref|ZP_08070153.1| ATP synthase F1 sector beta subunit [Streptococcus vestibularis
           ATCC 49124]
 gi|228249917|gb|EEK09187.1| ATP synthase F1, beta subunit [Streptococcus salivarius SK126]
 gi|311100309|gb|EFQ58518.1| ATP synthase F1, beta subunit [Streptococcus vestibularis F0396]
 gi|322124106|gb|EFX95645.1| ATP synthase F1 sector beta subunit [Streptococcus vestibularis
           ATCC 49124]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V       +   V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFAAGDKLPEINNALVVYTDEQKSKRIVLEVALELGEGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID +           I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKDTLGRVFNVLGDTIDLEAPFADDAEREPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQFFLSQN 410


>gi|89053540|ref|YP_508991.1| F0F1 ATP synthase subunit beta [Jannaschia sp. CCS1]
 gi|118573688|sp|Q28TJ6|ATPB_JANSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|88863089|gb|ABD53966.1| ATP synthase F1 subcomplex beta subunit [Jannaschia sp. CCS1]
          Length = 474

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 184/422 (43%), Gaps = 20/422 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGI 77
           +    G I+ +      V        + + +  +      + +V   +    V    +  
Sbjct: 1   MANAVGKITQVIGAVVDVQFNDHLPEILNALETENDGKRLVLEVAQHLGEGTVRTIAMDS 60

Query: 78  GEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V    G   +       GR++N +G+P+D    +   +    I    P   
Sbjct: 61  SEGLVRGQEVTDTDGPITVPVGPGTLGRILNVVGEPVDEGGPVDAEE-RRGIHQDAPEFA 119

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           ++    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + +
Sbjct: 120 DQSTEAEVLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGVSVFA 179

Query: 194 LVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            VGER RE  +   + +             K  +V    +E P  R    L+ +T+AE F
Sbjct: 180 GVGERTREGNDLYHEMIESGVIVPDNLPESKIALVYGQMNEPPGARMRIALSGLTLAEQF 239

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  ++
Sbjct: 240 RDATGADVLFFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TSTKR 297

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SRL D  
Sbjct: 298 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRLMDPT 357

Query: 365 WSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
              D   ++   +  ++ R++  +DI  I G     +      V +   I  FL Q P D
Sbjct: 358 IVGDEHYQVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFD 415

Query: 424 LS 425
           ++
Sbjct: 416 VA 417


>gi|291518502|emb|CBK73723.1| ATP synthase F1 subcomplex beta subunit [Butyrivibrio fibrisolvens
           16/4]
          Length = 466

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/423 (26%), Positives = 188/423 (44%), Gaps = 16/423 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  ++     V    +    + D +  +      + +V   I L +V    +   E +
Sbjct: 6   GRIVQVSGPVVDVEFTENDLPAIRDALYVKVGEEKRVMEVSQHIGLGVVRCIMLAPSEGL 65

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G    +       GR+ N LG  +DG ++L   +    I  + P    +  
Sbjct: 66  CRDMEVIATGESISVPVGEKTLGRLFNVLGDTLDGGENLDSAE-HWSIHREPPTFEEQSP 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGE 197
           V +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +         I + VGE
Sbjct: 125 VVEMLETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIQELIHNIATESGGYSIFTGVGE 184

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF   K  +VLL 
Sbjct: 185 RSREGNDLWTEMAESGVLDKTALVFGQMNEPPGARMRVAETGLTMAEYFRDVKNQDVLLF 244

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI     + G+IT+V +V V
Sbjct: 245 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLANDLGELQERIA--STKNGSITSVQAVYV 302

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  S LD   VL+R + E+G YP VDPL S SR+ +      +      
Sbjct: 303 PADDLTDPAPATTFSHLDATTVLSRKIVEQGIYPAVDPLESTSRILEPDVVGEEHYNTAR 362

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +  ++ +++E +DI  I G     D      V++   +  FL Q     S  + F  + 
Sbjct: 363 GVQEILQKYKELQDIIAILGMEELSDED-KLTVYRARKVQRFLSQP---FSVAENFTGVK 418

Query: 435 KKL 437
            + 
Sbjct: 419 GQF 421


>gi|198464543|ref|XP_001353265.2| GA18845 [Drosophila pseudoobscura pseudoobscura]
 gi|198149765|gb|EAL30768.2| GA18845 [Drosophila pseudoobscura pseudoobscura]
          Length = 675

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 184/414 (44%), Gaps = 23/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIGE 79
           G+I S+      V    +   + + +  +      L  V+     +  +IV    +   E
Sbjct: 130 GHIHSVIGPVIDVYFPEEVPDILNAIEVEDAPIGRL--VLEVFQHLGNNIVRCVAMDATE 187

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G   R++      GR++N +G PID    + K +    I ++ P     
Sbjct: 188 GIKRGQKVVDTGYPIRVAVGKAVLGRILNVVGDPIDERGEV-KSEYHSFIHTEAPVLTEL 246

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +    
Sbjct: 247 SVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFVGA 306

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        ++  K V+V    +E P  R    LT +TIAEYF   
Sbjct: 307 GERTREGNDLYHEMIESKVISLEEDTSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDI 366

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+I
Sbjct: 367 DGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSI 424

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+ +DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     
Sbjct: 425 TSVQAVYVPADDLSDPAPAATFTHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVG 484

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++   +  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 485 EEHYNVARAVQKTLQGYKSLQDIIAILGMDELSEED-KITVARARKIQRFLSQP 537


>gi|63253267|dbj|BAD98424.1| beta subunit of ATP synthesis [Humata polypodioides]
 gi|63253271|dbj|BAD98427.1| beta subunit of ATP synthesis [Humata aff. polypodioides CT1052]
          Length = 464

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|23503613|dbj|BAC20403.1| ATP synthase beta-subunit [Chloromonas serbinowi]
          Length = 376

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGVEVVDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEAALPIHRS 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKRTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|320102104|ref|YP_004177695.1| ATP synthase F1 subcomplex subunit alpha [Isosphaera pallida ATCC
           43644]
 gi|319749386|gb|ADV61146.1| ATP synthase F1 subcomplex alpha subunit [Isosphaera pallida ATCC
           43644]
          Length = 556

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/484 (20%), Positives = 171/484 (35%), Gaps = 71/484 (14%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG-----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M+   + +  + +   +    +      G +  +      V  LS+ V  G+ V  +   
Sbjct: 1   MKFRTDEITSVIQREIEQFTAEATPQVIGRVLEVGDGIARVYGLSE-VMAGEMVEFENG- 58

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
               G    +    V I  +G    I  G+ V    +  R+       GRV+N LG+PID
Sbjct: 59  --VKGIAFNLEESSVGIIILGDFTGIHEGETVRATRQLLRVPVGDALIGRVVNPLGEPID 116

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +   +  + + S  P    RQ V++  +TGI+ ID  TP+  GQR  +      GK
Sbjct: 117 DAGPIVTTESRL-VESPAPGISERQPVDEPLQTGIKAIDAMTPIGRGQRELIIGDRKTGK 175

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILR 231
           +T+   ++  +       +   +G++       +E          ++VV A + +   L+
Sbjct: 176 TTIAIDTILNQKGTGVICVYVAIGQKESTTASLVEVLRSHGAMDYTIVVAAGASDPAPLQ 235

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
            +AP     +AEYF        L I D +++ A + RE++      P    +P  +F   
Sbjct: 236 YLAPYAGTAMAEYFMYGQGKATLCIYDDLSKQAVAYRELSLLMRRPPGREAFPGDIFYCH 295

Query: 291 PRLLERIGPSEKE----------------------------------------------- 303
            RLLER                                                      
Sbjct: 296 SRLLERSAKLANRYVILNRQPDPSELIEDHSGVNGKTYVGVPGLEEAKHDLQTLGEGHHI 355

Query: 304 ------KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
                  G++TA+  +       +  I  +V SI DG I L   L   G  P +D   SV
Sbjct: 356 VKVTKSGGSLTALPIIETLEGEVSAYIPTNVISITDGQIYLQPDLFFAGVRPAIDVGISV 415

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  KA     KK+   L   +  F E      +G     +D    + + +   + + L
Sbjct: 416 SRVGGKAQIPAMKKVAGGLRLDLSAFRELEAFAQLG---TDLDKATQRQLDRGYRMVEIL 472

Query: 418 KQSP 421
           KQ  
Sbjct: 473 KQGA 476


>gi|63091845|emb|CAH58773.1| ATP synthase alpha chain [Lactococcus plantarum]
          Length = 367

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 155/375 (41%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +    + I  +G   +I  GD V   G+  
Sbjct: 1   RAHGL-ENAMSGELLEFSNGS---YGMAQNLESTDIGIIVLGEFGDIREGDTVKRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV+N LG P+DG   + K D +  + S  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGEALIGRVVNPLGIPVDGLGDI-KTDKTRPVESVAPGVMQRKSVAEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+T+      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTTIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRK 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP     + E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFIAPYAGAAMGEEFMYNGKHVLVVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      E   G++TA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGSMTALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D  +SVSR+   A     KK+  +L   +  F E   
Sbjct: 296 ISITDGQIFLENDLFYSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASFRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDAAT 367


>gi|4519356|dbj|BAA75593.1| ATP synthase beta-subunit [Paulschulzia pseudovolvox]
          Length = 376

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 168/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    L K + ++ I  K
Sbjct: 1   VSMNPTEGLMRGMDVLDTGKPLAVPVGKVTLGRIFNVLGEPVDNMG-LVKVEETLPIHRK 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFVDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYEKAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|289498375|gb|ADC99226.1| ATP synthase F1 alpha subunit [Vibrio breoganii]
          Length = 400

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/402 (23%), Positives = 169/402 (42%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L+  V  G+ +   G         + +  D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPFADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPELLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEESG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+  
Sbjct: 176 ALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 LAQYRE---LAAFAQFSSDLDETTKKQLDHGAKVTELMKQKQ 394


>gi|256376470|ref|YP_003100130.1| ATPase, FliI/YscN family [Actinosynnema mirum DSM 43827]
 gi|255920773|gb|ACU36284.1| ATPase, FliI/YscN family [Actinosynnema mirum DSM 43827]
          Length = 439

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 165/418 (39%), Positives = 248/418 (59%), Gaps = 8/418 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G ++ +  +  TV  +S    +GD V       + L +V+ +    +   P+G    I L
Sbjct: 22  GRVTGVVGLSVTVAGIS--ARIGDLVRIGSGGQEVLAEVVALGAGKITCLPLGALGGIGL 79

Query: 84  GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V    R  +I+      GRV++ LG+P+DG   L  G  S+ +    P A+ RQ ++
Sbjct: 80  GAEVVSTNRPLQIAVGEQLRGRVLDGLGRPMDGGPPLV-GLESVTVDMTPPSALQRQLID 138

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           K  + G+R +D   P   GQRIG+FAGSG+GKS+LLSM  R    +  +++L+GERGREV
Sbjct: 139 KPLQLGVRALDTMVPCGQGQRIGIFAGSGVGKSSLLSMITRGTEAEITVVALIGERGREV 198

Query: 203 REFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFI  D   + L +SVVVVATSD+ P++R  A   A  IAE++  +G N LL++DS+TR
Sbjct: 199 REFIENDLGPEGLARSVVVVATSDQPPMVRLRAGFVATRIAEWYRDRGANALLMMDSLTR 258

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
            A + RE+  ++GE P  RG+P SVF+ +P LLER GP+E  +G+IT + +VLV+GD+HN
Sbjct: 259 IAMAQREVGLSAGEPPATRGFPPSVFALMPTLLERAGPAE--RGSITGLYTVLVEGDDHN 316

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD+ RSILDGH+VL+R LA  G +P +D L SVSR+     + +++   + L  L+ 
Sbjct: 317 EPIADTARSILDGHVVLDRRLATSGHFPSIDVLESVSRVTGAVTTPEQRADAAQLRRLLA 376

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438
              + R++  IG Y  G +L  D+A+   P I   L Q     +S E  ++E+ + L 
Sbjct: 377 ARRDVRELVEIGAYVGGTNLDADRAMALEPRINGLLTQDIHARTSAESSWEELRELLH 434


>gi|14020807|dbj|BAB47548.1| ATP synthase beta-subunit [Eudorina elegans]
          Length = 376

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYESAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|313681887|ref|YP_004059625.1| ATP synthase f1 subcomplex beta subunit [Sulfuricurvum kujiense DSM
           16994]
 gi|313154747|gb|ADR33425.1| ATP synthase F1 subcomplex beta subunit [Sulfuricurvum kujiense DSM
           16994]
          Length = 466

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 115/410 (28%), Positives = 192/410 (46%), Gaps = 18/410 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF----VVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           G I+ +      V        + +     V  +G  +  + +V   +    V    + + 
Sbjct: 3   GKIAQVIGPVVDVDFEGYLPTVNEAIEVNVSVEGNTTRLVLEVASHLGNGRVRTIAMDMS 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G      G   ++       GR+ N +G+ IDG D +   D +  I    PP ++
Sbjct: 63  EGLVRGMAAKATGAPIKVPVGEKVLGRIFNVIGETIDGGDQITDCD-TWSIHRDPPPLVD 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         + + 
Sbjct: 122 QSTKTEMFETGIKVVDLLAPYGKGGKVGLFGGAGVGKTVIIMELINNVAQGHSGLSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    ++  K  +      E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESSVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RFA S  E++   G +P A GY  ++  E+  L +RI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFAQSGSEMSALLGRIPSAVGYQPTLAREMGALQDRI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SRL D      +   
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRLLDPQIIGEEHYN 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
           +   +   + ++++ +DI  I G     +   DKA V +   I  FL Q 
Sbjct: 360 VARGVQKTLQKYKDLQDIIAILGMDELSED--DKATVERARKIEKFLSQP 407


>gi|23503601|dbj|BAC20397.1| ATP synthase beta-subunit [Chloromonas radiata]
          Length = 376

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 98/362 (27%), Positives = 164/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPSDGLTRGMEVVDTGKPLSVPVGKATLGRIFNVLGEPVDNLGPV-KAETTLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S   
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTPT 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E +DI  I G     +      V +   I  +L 
Sbjct: 298 MLQPWIVGEKHYSVAQDVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERYLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|307697217|gb|ADN86063.1| ATP synthase CF1 beta subunit [Chasmanthium latifolium]
          Length = 498

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/420 (25%), Positives = 179/420 (42%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICP 74
             G I  I      +T    +   + + ++ Q +++     +   +V ++  +  +    
Sbjct: 19  SAGRIDQIIGPVLDITFPPGKLPYIYNALIVQSRDTADKQINVTCEVQQLLGNNRIRAVA 78

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGAALCVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +    GY  ++  E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMXSXVGYQPTLSXEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++  V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQVVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPTVDPLDSTSTML 375

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRVVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEEDH-LTVARAQKIERFLSQP 434


>gi|157678797|dbj|BAF80639.1| ATP synthase CF1 alpha chain [Cricosphaera roscoffensis]
          Length = 357

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 157/361 (43%), Gaps = 11/361 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF- 93
            V  L Q V  G+ +  Q      +G  + +  D V    +G G +I  G  V   G+  
Sbjct: 1   RVYGLEQ-VMAGELLEFQDG---TVGIALNLENDNVGAVLMGTGLDILEGGPVRSTGKIA 56

Query: 94  RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
           +I     + GRV+NAL  PIDG   +   D  + + +  P  + R+ V +  +TGI  ID
Sbjct: 57  QIPVGDKFLGRVVNALAVPIDGKGDIVPDDSRL-VEAMAPGIITRKSVCEPVQTGITAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        +   +G++   V   +     
Sbjct: 116 AMIPIGRGQRELIIGDRQTGKTSVAVDTVINQKSEDVICVYVAIGQKASSVASIVTTLEE 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
               + +++V A +D+   L+ +AP T   +AEYF  KG   L+I D +++ A + R+++
Sbjct: 176 KGALEYTIIVAANADDPATLQYIAPYTGAALAEYFMYKGKATLIIYDDLSKQASAYRQMS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER          G++TA+  +     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDALGGGSMTALPIIETQAGDVSAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+  L   G  P ++   SVSR+   A +   K++   L   + +F E   
Sbjct: 296 ISITDGQIFLSGDLFNAGIRPAINVGISVSRVGSAAQTKAMKQVAGKLKLELAQFAELEA 355

Query: 389 I 389
            
Sbjct: 356 F 356


>gi|6561608|gb|AAF16952.1|AF197620_1 ATPase alpha subunit [Podocarpus macrophyllus]
          Length = 390

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 86/382 (22%), Positives = 153/382 (40%), Gaps = 19/382 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPID 114
           S   G  +    + V I   G    I  GDLV   G    +       GRV++ALG PID
Sbjct: 4   SGVKGIALNPENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKALLGRVVDALGVPID 63

Query: 115 GDDSL--GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           G  +L   +G     + +K P  + R+ V +  +TG + +D   P+  GQR  +      
Sbjct: 64  GKGALQVDRGAERRRVEAKAPGIIERKSVHEPPQTGSKAVDSLVPIGRGQREPIIGDRQT 123

Query: 173 GKSTLLSMFARSDCFDKV----------IISLVGERGREVREFIEDYLG-DNLKKSVVVV 221
           GK+ +      +     +          +   +G++   V + ++     D L  +++  
Sbjct: 124 GKTAIAIDIISNQKRSHLRSGTSDSVYRVYVAIGQKRSTVAQSVQIIAEADALGYTIINA 183

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           AT+ +   L+  AP +   + EY    G + L+I D +++ A + R+++      P    
Sbjct: 184 ATASDPAPLQFPAPYSGCAMGEYPRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREA 243

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            P  VF    R LER      +   G++TA+  +     + +     +V S  DG I L 
Sbjct: 244 SPGDVFYLHSRPLERAAKRSDQTGAGSLTALPVIETQAGDVSAYTPTNVISTTDGQICLE 303

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
             L   G  P ++   SVSR+   A S   K++  SL   + ++ E   +         +
Sbjct: 304 TELLYRGIRPAINVGLSVSRVGSAAQSKAMKQVCGSLKLELAQYRE---VAASAQSGSDL 360

Query: 400 DLILDKAVHQVPIIYDFLKQSP 421
           D       ++   + +  KQ  
Sbjct: 361 DAATQAPSNRGARLTEVPKQPQ 382


>gi|19033065|gb|AAL83517.1|AF408789_1 ATP synthase beta subunit [Coleochaete soluta]
          Length = 402

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVDCT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGKEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|84393416|ref|ZP_00992173.1| ATP synthase subunit B [Vibrio splendidus 12B01]
 gi|84375932|gb|EAP92822.1| ATP synthase subunit B [Vibrio splendidus 12B01]
          Length = 467

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/440 (25%), Positives = 186/440 (42%), Gaps = 26/440 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQGEVPRVYDALNVNEVKERLVLEVQQQLGGGVVRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  +    I  + P    
Sbjct: 61  DGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-HYAIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETSLLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNIENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKAGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS----- 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q      
Sbjct: 358 GQEHYDIARGVQSTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIEKFLTQPYHVAE 416

Query: 421 --PSDLSSEDVFQEITKKLQ 438
               D       +E  +  Q
Sbjct: 417 VFTGDPGVYVPLKETLRGFQ 436


>gi|260429053|ref|ZP_05783030.1| ATP synthase F1, beta subunit [Citreicella sp. SE45]
 gi|260419676|gb|EEX12929.1| ATP synthase F1, beta subunit [Citreicella sp. SE45]
          Length = 474

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 183/417 (43%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +         + +V   +    V    +   E + 
Sbjct: 6   GKVTQVIGAVVDVKFDDHLPEILNALTTTNDGKTLVLEVAQHLGESTVRTIAMDSTEGLV 65

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V    G   +       GR++N +G+P+D    + + D    I    P    +   
Sbjct: 66  RGQEVTDTQGPISVPVGNATLGRILNVVGEPVDEQGPV-EADEYRAIHQPAPEFDEQATD 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 TEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SR+ D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSNSRILDPQIVGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              +   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYNVARDVQGILQRYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQ-PFDVA 417


>gi|42558356|gb|AAS19887.1| ATP synthase beta chain [Grammitis poeppigiana]
          Length = 422

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|331270433|ref|YP_004396925.1| ATP synthase F1 subunit beta [Clostridium botulinum BKT015925]
 gi|329126983|gb|AEB76928.1| ATP synthase F1, beta subunit [Clostridium botulinum BKT015925]
          Length = 463

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 114/405 (28%), Positives = 189/405 (46%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   S  +  + + +     +   + +V   I  D+V    +   E +
Sbjct: 6   GKVVQVIGPVIDIKFDSDCLPNIYNAIEIDMGDRVLITEVEQHIGDDVVRTIAMESTEGL 65

Query: 82  SLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G   V       +       GR+ N LGK ID D +  K +    I    P    +  
Sbjct: 66  KRGMKAVNTEKPISVPVGTEILGRLFNVLGKTIDEDGNF-KAEQYYPIHRPAPTFEEQSV 124

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 125 EPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 184

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +G +VLL +
Sbjct: 185 RTREGNDLYYEMKESGVINKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFI 244

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V 
Sbjct: 245 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVP 302

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +   +   
Sbjct: 303 ADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDIAIK 362

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + H++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 363 VKHILERYKELQDIIAILGVDELSEED-KLVVSRSRKVQRFLSQP 406


>gi|313894311|ref|ZP_07827876.1| ATP synthase F1, beta subunit [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441135|gb|EFR59562.1| ATP synthase F1, beta subunit [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 474

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 177/381 (46%), Gaps = 14/381 (3%)

Query: 51  HQGKNSDNLGQVIR----INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
           H  K  D    V+     +  D V    +   + ++        G    +       GR+
Sbjct: 36  HDHKAHDRQKIVVEVMQHLGDDTVRCVAMSSTDGMTRNMEAEDTGNPISVPVGEGVLGRI 95

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G +IG
Sbjct: 96  FNVLGETVDHDPAPVAADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKGGKIG 155

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           +F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+ +V 
Sbjct: 156 LFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKTALVY 215

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +P A 
Sbjct: 216 GQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRMPSAV 275

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   VL+R
Sbjct: 276 GYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLSR 333

Query: 341 SLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           S+AE G YP VDPL S SR+ D      +  ++   +  ++ ++++ +DI  I G     
Sbjct: 334 SIAELGIYPAVDPLDSTSRILDPHVLGEEHYEVARGVQEVLQKYKDLQDIIAILGMEELS 393

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  FL Q 
Sbjct: 394 DED-KLTVSRARKIQRFLSQP 413


>gi|195378829|ref|XP_002048184.1| GJ13823 [Drosophila virilis]
 gi|194155342|gb|EDW70526.1| GJ13823 [Drosophila virilis]
          Length = 611

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/415 (26%), Positives = 187/415 (45%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIR-INLDIVYICPVGIG 78
            + G I ++      V    +   + + +  Q       + +V+  +  ++V    +   
Sbjct: 40  RREGIIHAVIGPVIDVYFPEEVPEVLNAMEIQDAPIGRLVLEVLHHLGNNVVRCVAMDST 99

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G   R+       GR++N +G PID    + K +    I ++ P  + 
Sbjct: 100 DGLRRGQKVLDTGFPIRVPVGKVVLGRIVNVVGDPIDERGEI-KSEFYSFIHNEAPELIE 158

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
                +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +   
Sbjct: 159 LNVKPEILETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELISNIAKTHGGYSVFVG 218

Query: 195 VGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
            GER RE  +   + +        D+  K  +V    +E P  R    LT +TIAEYF  
Sbjct: 219 AGERTREGNDLYHEMIETKVISLEDDSSKVALVYGQMNEPPGARSRVVLTGLTIAEYFRD 278

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+
Sbjct: 279 IDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGMMQERI--TSTKNGS 336

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D    
Sbjct: 337 ITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSTSRVLDPEIV 396

Query: 367 ADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            DE   +  ++   +  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 397 GDEHYNVARAVQKTLQGYKSLQDIIAILGMDELSEED-KLTVARARKMQRFLSQP 450


>gi|294624654|ref|ZP_06703325.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601048|gb|EFF45114.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 468

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRNEVPKVYRALKVDGTEITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    +  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLVATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD----- 250
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKG 239

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|326203255|ref|ZP_08193120.1| ATP synthase F1, beta subunit [Clostridium papyrosolvens DSM 2782]
 gi|325986513|gb|EGD47344.1| ATP synthase F1, beta subunit [Clostridium papyrosolvens DSM 2782]
          Length = 464

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/408 (25%), Positives = 183/408 (44%), Gaps = 13/408 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGE 79
             G I  +      +   +  +  + + +     +     +V++ +  D V    +   +
Sbjct: 4   SSGVIVQVIGPVLDIRFENGILPNIYNAIKIPTDSGTVTAEVMQHLGNDTVRCVAMSSTD 63

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G      G    +       GR+ N LG+P+D    +      + I  + P    +
Sbjct: 64  GLVRGMSAEDTGDAITVPVGKEVLGRIFNVLGEPVDKAGPVTPT-AYLPIHREAPSLEEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
           +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   V
Sbjct: 123 RPSTEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSIFTGV 182

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   D      ++K+ +V    +E P  R    LT +T+AEYF  +   +VL
Sbjct: 183 GERTREGNDLWHDMNDSGVIEKTAMVFGQMNEPPGARMRVGLTGLTMAEYFRDQMGQDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +++  L ERI      KG+IT+V +V
Sbjct: 243 LFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLATDVGALQERIA--STNKGSITSVQAV 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+R +   G YP VDPL S SR+ D      +   +
Sbjct: 301 YVPADDLTDPAPATTFAHLDATTVLSRDIVAMGIYPAVDPLESTSRILDPKVVGEEHYAV 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R +E +DI  I G     +      V +   I  +L Q 
Sbjct: 361 ARRVQEILQRNKELQDIIAILGMDELPEED-KLTVFRARKIQRYLSQP 407


>gi|150187390|emb|CAK30247.1| ATP synthase alpha subunit [Streptococcus marimammalium]
          Length = 362

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/357 (27%), Positives = 157/357 (43%), Gaps = 10/357 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + + I  +G    I  GDLV   G+   +      
Sbjct: 8   AMSGELLEFENG---VFGMAQNLESNDIGIIILGDFSSIREGDLVKRTGKIMEVPVGEEL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG P+DG   + K D +  + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGIPVDGLGDI-KTDKTRPVETPAPGVMERKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+ +   ++  + D     I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTAVAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRRHGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393
            L  SL   G  P +D  +SVSR+   A     KK+  +L   +  + E       G
Sbjct: 304 FLQESLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELEAFTQFG 360


>gi|17224745|gb|AAL37094.1| ATP synthase beta subunit [Stenomeris borneensis]
          Length = 473

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 25  KGXDTAGQQINVACEVHQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 84

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 85  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDPKLSIFETGIKVVDLLAPXRRGGKI 143

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F  +G GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 144 GLFGEAGXGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 203

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 204 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 263

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 264 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 321

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 322 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTSQRYKELQDIIA 381

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 382 ILGLDELSEED-RLTVARARKIERFLSQP 409


>gi|172072905|ref|YP_001806666.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
 gi|171854924|dbj|BAG16664.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
 gi|239794293|dbj|BAH73290.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
 gi|239794375|dbj|BAH73371.1| ATP synthase CF1 beta subunit [Cryptomeria japonica]
          Length = 491

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V+        + + ++   K++D  GQ I +  ++        V    
Sbjct: 19  GRIDQIIGPVLDVSFPPGNMPRIYNSLIV--KDNDTTGQPISVTCEVQQLLGNNKVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 77  MSATDGLMRGMKVIDTGGPLSVPVGETTLGRIFNVLGEPVDDLGPVDAL-TRSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFTQLDTRFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEDD-RLIVARARKIERFLSQP 432


>gi|156622731|dbj|BAF76346.1| ATP synthase beta subunit [Schisandra repanda]
          Length = 487

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 179/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G I+ I      V      +       VV   K  D +GQ I +  ++        V   
Sbjct: 13  GRITQIIGPVLDVAFPPGKMPNIYNSLVV---KGRDTVGQQINVTCEVQQLLGNNRVRAV 69

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 70  AMSATDGLMRGMEVIDTGAPLSVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSA 128

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 129 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGV 188

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 189 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTM 248

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I+RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 249 AEYFRDVNEQDVLLFIDNISRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 306

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 307 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 366

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R +E +DI  I G     +      V +   I  FL Q
Sbjct: 367 LQPRIVGEEHYETAQRVKQTSQRXKELQDIIAILGLDELSEED-RFTVARARKIERFLXQ 425

Query: 420 S 420
            
Sbjct: 426 P 426


>gi|37543301|gb|AAL92715.1| ATP synthase beta subunit [Chaetosphaeridium sp. 314c2]
          Length = 402

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMDVIDTGAALSVPVGEVTLGRIFNVLGEPVDNMGPVNAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLGESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|300250972|gb|ADJ95799.1| ATP synthase [Helicoverpa zea]
          Length = 516

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 112/426 (26%), Positives = 194/426 (45%), Gaps = 21/426 (4%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLG 84
           + ++      V        + + +  Q +    + +V   +  + V    +   E +  G
Sbjct: 53  VVAVIGAVVDVQFEDNLPPILNALEVQNRQPRLVLEVAQHLGENTVRTIAMDGTEGLVRG 112

Query: 85  DLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143
             V   G   RI   A   GR+IN +G+PID    +   D +  I ++ P  ++    ++
Sbjct: 113 QPVQDCGSPIRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQE 171

Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200
              TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER R
Sbjct: 172 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 231

Query: 201 EVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           E  +  ++ +        D   K  +V    +E P  R    LT +T+AEYF  +   +V
Sbjct: 232 EGNDLYQEMIESGVISLKDKTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDV 291

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +
Sbjct: 292 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQA 349

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      +   
Sbjct: 350 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYN 409

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431
           +   +  ++  ++  +DI  I G     +      V +   I  FL Q        +VF 
Sbjct: 410 VARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLFQP---FQVAEVFT 465

Query: 432 EITKKL 437
               KL
Sbjct: 466 GHAGKL 471


>gi|304322983|ref|YP_003795521.1| CF1 beta subunit of ATP synthase [Floydiella terrestris]
 gi|270048182|gb|ACZ58477.1| CF1 beta subunit of ATP synthase [Floydiella terrestris]
          Length = 489

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 115/419 (27%), Positives = 186/419 (44%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNL-----GQVIRINLDI-VYICPV 75
            G I+ I      +   +  V  + + +V +GKN+  +      +V ++  D  V    +
Sbjct: 11  TGNITQIIGPVVDMVFPAGSVPNIYNALVIRGKNTAGIEMLVTCEVQQLLGDRLVRAVSM 70

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   ++       GR+ N LG+P+D    +   +  + I    P 
Sbjct: 71  SPTEGLMRGMEVVDTGNPLQVPVGKQTLGRIFNVLGEPVDNLGPVNTEE-KLPIHRPAPA 129

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 130 FTDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 189

Query: 192 ISLVGERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 190 FAGVGERTREGNDLYMEMKESRVIVEENLGESKVALVYGQMNEPPGARMRVGLTALTMAE 249

Query: 244 YFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ERI  +  
Sbjct: 250 YFRDMNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGSLQERI--TST 307

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ +V V  D+  DP + +  + LD   VL+R+LA +G YP VDPL S S +  
Sbjct: 308 KDGSITSIQAVYVPADDLTDPSSVATFAHLDATTVLSRNLAAKGIYPAVDPLDSNSVMLQ 367

Query: 363 KAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                DE       +   + R +E  DI  I G     +      V +   I  FL Q 
Sbjct: 368 PYIVGDEHYSCAQRVKGTLQRLKELNDIIAILGLDELSEED-RLTVARARKIERFLSQP 425


>gi|12004161|gb|AAG43920.1|AF213789_1 ATP synthase beta subunit [Samolus repens]
          Length = 432

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E ++ G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 14  LGTNRVRAVAMSASEGLTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVD-TR 72

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 73  TTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 132

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 133 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARM 192

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 193 RVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 252

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 253 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 310

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  ++   +   + R +E +DI  I G     +      V + 
Sbjct: 311 DPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRXKELQDIIAILGLDELSEED-RLTVARA 369

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 370 RKIERFLSQP 379


>gi|225861341|ref|YP_002742850.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230577|ref|ZP_06964258.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255872|ref|ZP_06979458.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298503243|ref|YP_003725183.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254808170|sp|C1CSC8|ATPB_STRZT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|225727517|gb|ACO23368.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238838|gb|ADI69969.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389691|gb|EGE88036.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA04375]
          Length = 468

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID +    
Sbjct: 48  ALELGDGMVRTISMESTDGLTRGMEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFT 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLA 345

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|325918314|ref|ZP_08180451.1| ATPase FliI/YscN family [Xanthomonas vesicatoria ATCC 35937]
 gi|325535454|gb|EGD07313.1| ATPase FliI/YscN family [Xanthomonas vesicatoria ATCC 35937]
          Length = 458

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 145/427 (33%), Positives = 224/427 (52%), Gaps = 5/427 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           E  +   +++ G +     +    T       +G     +        +V+    +  Y+
Sbjct: 30  EPTAGRTLIREGILRRAVGLTLEATG--CEAPMGATCKVEVDGGWVDAEVVGFAGERTYL 87

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      +     V    R   +       GRVI++ G P+DG   + +G+ S+ +   
Sbjct: 88  MPSAELHGLLPNARVVPSRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RGEGSVSMAGM 146

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ +      G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D ++
Sbjct: 147 SINPLAREPITTSLDVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIV 206

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVR+F+      + L+++VVV A +D  P+ R      A  IAE+F  +G 
Sbjct: 207 VGLIGERGREVRDFVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGL 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA 
Sbjct: 267 NVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAF 326

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +
Sbjct: 327 YTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADEPWR 386

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
             +  L  L+  +   RD+  IG Y+ G D   D+A+ + P I +FL Q     S     
Sbjct: 387 LRIRKLKRLLSAYTANRDLIAIGAYQRGSDPATDEALARWPEIVEFLGQDVHKASLLSDS 446

Query: 431 QEITKKL 437
               ++L
Sbjct: 447 LSALQQL 453


>gi|296331318|ref|ZP_06873790.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676304|ref|YP_003867976.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151433|gb|EFG92310.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414548|gb|ADM39667.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 473

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G      G    +       GRV N LG+ ID ++ + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGVQRGMEAVDTGAPISVPVGDVTLGRVFNVLGENIDLNEPVP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      + K+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEHFRDEQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   +   +   + R++E +DI  I G     D      V +   I 
Sbjct: 349 STSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELSDED-KLVVQRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|260949645|ref|XP_002619119.1| ATP synthase beta chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
 gi|238846691|gb|EEQ36155.1| ATP synthase beta chain, mitochondrial precursor [Clavispora
           lusitaniae ATCC 42720]
          Length = 415

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 106/375 (28%), Positives = 174/375 (46%), Gaps = 19/375 (5%)

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+IN +G+PID    +        I ++ P
Sbjct: 1   MDGTEGLVRGASVTDTGSPISVPVGRETLGRIINVVGEPIDERGPIN-SKKRNPIHTEPP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S
Sbjct: 60  SFVEQSTSAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFS 119

Query: 194 L---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +   VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEY
Sbjct: 120 VFTGVGERTREGNDLYREMQETGVINFEGDSKVALVFGQMNEPPGARARVALTGLTIAEY 179

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 180 FRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTK 237

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D 
Sbjct: 238 KGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDA 297

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +   + S++   +  ++  +DI  I G     +      V +   I  FL Q   
Sbjct: 298 SIVGKEHYDVASNVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP-- 354

Query: 423 DLSSEDVFQEITKKL 437
             +  +VF  I  +L
Sbjct: 355 -FAVAEVFTGIPGRL 368


>gi|302505577|ref|XP_003014495.1| hypothetical protein ARB_07057 [Arthroderma benhamiae CBS 112371]
 gi|291178316|gb|EFE34106.1| hypothetical protein ARB_07057 [Arthroderma benhamiae CBS 112371]
          Length = 623

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/374 (28%), Positives = 169/374 (45%), Gaps = 19/374 (5%)

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   +I       GR++N  G PID    + KG     I ++ P 
Sbjct: 208 TGTEGLVRGAKVTDTGLPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPE 266

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+
Sbjct: 267 FVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSV 326

Query: 195 ---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              VGER RE  +   +         D   K  +V    +E P  R    LT +TIAEYF
Sbjct: 327 FTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARVALTGLTIAEYF 386

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +  +K
Sbjct: 387 RDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKK 444

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D  
Sbjct: 445 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPR 504

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               D     + +  ++  ++  +DI  I G     +      V +   +  FL Q    
Sbjct: 505 IVGEDHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKMQRFLSQP--- 560

Query: 424 LSSEDVFQEITKKL 437
            +   VF  I   L
Sbjct: 561 FTVAQVFTGIEGAL 574


>gi|241912894|gb|ACS72125.1| AtpB [Galeoglossum tubulosum]
          Length = 489

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRITQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P
Sbjct: 71  MSATDGVMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P     +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQMVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|302656393|ref|XP_003019950.1| hypothetical protein TRV_05996 [Trichophyton verrucosum HKI 0517]
 gi|291183727|gb|EFE39326.1| hypothetical protein TRV_05996 [Trichophyton verrucosum HKI 0517]
          Length = 623

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 107/374 (28%), Positives = 169/374 (45%), Gaps = 19/374 (5%)

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   +I       GR++N  G PID    + KG     I ++ P 
Sbjct: 208 TGTEGLVRGAKVTDTGLPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPE 266

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S+
Sbjct: 267 FVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSV 326

Query: 195 ---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              VGER RE  +   +         D   K  +V    +E P  R    LT +TIAEYF
Sbjct: 327 FTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARVALTGLTIAEYF 386

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +  +K
Sbjct: 387 RDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKK 444

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D  
Sbjct: 445 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPR 504

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
               D     + +  ++  ++  +DI  I G     +      V +   +  FL Q    
Sbjct: 505 IVGEDHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKMQRFLSQP--- 560

Query: 424 LSSEDVFQEITKKL 437
            +   VF  I   L
Sbjct: 561 FTVAQVFTGIEGAL 574


>gi|260102580|ref|ZP_05752817.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
 gi|260083607|gb|EEW67727.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075]
          Length = 479

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 184/379 (48%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V + +N   + +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSENESIVLEVTVELGDGVLRTIAMESTDGLRRGMKVEDTGGPISVPVGEDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPAFSKDHPRESIHKEAPEYEDLTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHILQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   +  FL Q+
Sbjct: 391 E-KLIVARARKVQFFLSQN 408


>gi|123325687|gb|ABM74468.1| ATP synthase beta subunit [Microcitrus australis]
          Length = 466

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G+I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVDQPINVTCEVQQLLGNNRVRAVAMS 61

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 62  ATDGLTRGMEVIDTGAPLSVPVGGVTLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 121 IQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 180

Query: 196 GERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G  G   RE      +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 181 GGVGERTREGXDLYMEMKESGVINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 240

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F       VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 241 FRDVNEQXVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 299 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 358

Query: 364 AWSADE-KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +E  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 RIVGEEXYETAQRVKQTLQRYKELQDIIAILGLDXLSEED-RLTVARARKIERFLSQP 415


>gi|21264381|sp|O03085|ATPB_VANDA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|14424440|gb|AAB51736.3| ATP synthase beta chain [Vandenboschia davallioides]
          Length = 479

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 180/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+N    GQ I +  ++        V    
Sbjct: 5   GQITQIIGPVLDVAFSPGKMPNIYNSLLIKGQNPA--GQEINVTCEVQQLLGNNEVRAVA 62

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       G + N LG P+D    +     +  I    P
Sbjct: 63  MSATDGLMRGMNVVDTGAPLSVPVGEITLGXIFNVLGDPVDNLGPVDTS-TTFPIHRSAP 121

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                      F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 122 AFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 181

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 182 VFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMA 241

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 242 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TS 299

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 300 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 359

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 418


>gi|241912918|gb|ACS72137.1| AtpB [Stenorrhynchos millei]
 gi|241912922|gb|ACS72139.1| AtpB [Stenorrhynchos vaginatum]
          Length = 489

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   +    +   + + +V + +++     +   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIKSRDTFVQQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGMKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|195327959|ref|XP_002030684.1| GM25584 [Drosophila sechellia]
 gi|194119627|gb|EDW41670.1| GM25584 [Drosophila sechellia]
          Length = 625

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 113/416 (27%), Positives = 186/416 (44%), Gaps = 23/416 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGI 77
           + G I ++      V    +   + + +  Q     NL  V+     +  +IV    +  
Sbjct: 105 RKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIANL--VLEVFHHLGNNIVRCVAMDS 162

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   R++      GR++N +G PID    + K D    I ++ P   
Sbjct: 163 TEGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEV-KSDFYSFIHNEAPELT 221

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           +     +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +  
Sbjct: 222 DLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFV 281

Query: 194 LVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             GER RE  +   + +        D+  K V+V    +E P  R    LT +TIAEYF 
Sbjct: 282 GAGERTREGNDLYHEMIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFR 341

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G
Sbjct: 342 DVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNG 399

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 400 SITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDV 459

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++   +  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 460 VGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEED-KLTVARARKMQRFLSQP 514


>gi|157285109|gb|ABV31294.1| ATPase [Vibrio fischeri]
          Length = 403

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/396 (23%), Positives = 170/396 (42%), Gaps = 24/396 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACW 101
           V  G+ +   G         + +N D V    +G   ++  G  V   GR   +      
Sbjct: 5   VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEL 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  G
Sbjct: 62  LGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+ +   ++  + D     I   +G++   +   +           ++
Sbjct: 121 QRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTI 180

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+      P 
Sbjct: 181 VVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPG 240

Query: 279 ARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER     +             + G++TA+  +     + +  + 
Sbjct: 241 REAFPGDVFYLHSRLLERAARVSEAYVERFTNGEVTGKTGSLTALPIIETQAGDVSAFVP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E
Sbjct: 301 TNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE 360

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +     +   +D    K +     + + +KQ  
Sbjct: 361 ---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ 393


>gi|325264571|ref|ZP_08131301.1| ATP synthase F1, beta subunit [Clostridium sp. D5]
 gi|324030233|gb|EGB91518.1| ATP synthase F1, beta subunit [Clostridium sp. D5]
          Length = 465

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 188/407 (46%), Gaps = 15/407 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +         + +V   +  + V    +   E +
Sbjct: 4   GRIVQVMGPVVDVVFEDGNLPFIKDALEVDNNGKKCIMEVAQHVGNNEVRCLMLAASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ ID  + +   D    I    P   ++  
Sbjct: 64  HKDMEVTATGDGIKVPVGEQTLGRLFNVLGETIDDGEPVN-SDKKWVIHRDPPSFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 VIEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL 
Sbjct: 183 RSREGNDLWTEMKASGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI       G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STRNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ +
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEADIVGEEHYEVAN 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +T ++ +++E +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 361 QVTAILQKYKELQDIIAILGMEELSDD--DKAVVMRARKIQRFLSQP 405


>gi|289665457|ref|ZP_06487038.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289668361|ref|ZP_06489436.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 468

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/412 (25%), Positives = 178/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL-- 253
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKG 239

Query: 254 ----LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
               L +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|170516102|gb|ACB15061.1| ATPase alpha subunit [Ephedra intermedia]
          Length = 352

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 83/356 (23%), Positives = 147/356 (41%), Gaps = 15/356 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V I   G    I  G  V   G    ++      GRV++ALG P+DG   +  G  S  +
Sbjct: 1   VGIVVFGSDTAIKEGSNVTRTGAIVAVTVGTEMLGRVVDALGVPLDGKGEVASGK-SRRV 59

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS---- 184
            +K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +    
Sbjct: 60  EAKAPGIIARKSVHEPMQTGVKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDLILNQKRP 119

Query: 185 ---DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240
                    +   +G++   V + ++          S+VV AT+ +   L+ +AP +   
Sbjct: 120 WREHDPVYCVYVAIGQKRSTVAQLVQILSEQMAMAYSIVVAATASDPAPLQFLAPYSGCA 179

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + EYF   G +  +I D +++ A + R+++      P    +P  VF    RLLER    
Sbjct: 180 MGEYFRDNGMHAAIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKR 239

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+ TA+  +     + +  I  +V SI DG I L   L   G  P ++   SVS
Sbjct: 240 SDHTGAGSFTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVS 299

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           R+   A     K+L  SL   + ++ E   +     +   +D      +++   + 
Sbjct: 300 RVGSAAQLKAMKQLCGSLKLELAQYRE---VAAFAQFGSDLDAATQSLLNRGARLT 352


>gi|224830564|gb|ACN66377.1| ATP synthase beta chain [Penianthus patulinervis]
          Length = 422

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 181/416 (43%), Gaps = 29/416 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 13  GRVAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-SRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER   + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQER--MTS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
                  +  +    +     R++E +DI  I G     +      V +   I  F
Sbjct: 368 QPRIVGKEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERF 422


>gi|157285113|gb|ABV31296.1| ATPase [Vibrio parahaemolyticus]
          Length = 403

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/396 (23%), Positives = 167/396 (42%), Gaps = 24/396 (6%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACW 101
           V  G+ +   G         + +  D V    +G   ++  G  V   GR   +      
Sbjct: 5   VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEVPVGPEL 61

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  G
Sbjct: 62  LGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRG 120

Query: 162 QRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  V      GK+ +   ++  + +     I   +G++   +   +           ++
Sbjct: 121 QRELVIGDRQTGKTAMAIDAIINQKNSGIFSIYVAIGQKASTIANVVRKLEEHGALANTI 180

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P 
Sbjct: 181 VVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPG 240

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIA 325
              +P  VF    RLLER     +E              G++TA+  +     + +  + 
Sbjct: 241 REAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGDVSAFVP 300

Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385
            +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   +  + E
Sbjct: 301 TNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAAYRE 360

Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
              +     +   +D    K +     + + +KQ  
Sbjct: 361 ---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ 393


>gi|20467413|gb|AAL27837.1| ATPase beta subunit [Abies grandis]
          Length = 430

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/394 (26%), Positives = 176/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           ++ QG+ +   GQ I++  ++        V    +   + ++ G  V   G    +    
Sbjct: 3   LIVQGQGTT--GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGG 60

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    +     +  I    P           F+TGI+V+D+  P  
Sbjct: 61  ATLGRIFNVLGEPVDNLGPVD-ARTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 119

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 120 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 179

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AE+F      +VLL +D+I RF  +  
Sbjct: 180 EQKISESKVALVYGQMNEPPGARMRVGLTALTMAEHFRDVNEQDVLLFIDNIFRFVQAGS 239

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +
Sbjct: 240 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 297

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   V +R LA +G YP VDPL S S +        +  ++   +   + R++E 
Sbjct: 298 TFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYEIAQGVKQTLQRYKEL 357

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QDIIAIPGLDELSEED-RLIVARARKIERFLSQP 390


>gi|5001575|gb|AAD37034.1|AF092108_1 ATP synthase beta subunit [Caulophyllum thalictroides]
          Length = 476

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 167/389 (42%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N  G+P+D          S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVXGEPVDNLGPXXXXXXS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMEXINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G    A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRXXSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|258690456|gb|ACV87990.1| ATP synthase beta subunit [Haliclona (Haliclona) sp. KJP-2009]
          Length = 427

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/386 (27%), Positives = 183/386 (47%), Gaps = 20/386 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G++    G   RI       GR+IN +G+PID    +G  +
Sbjct: 26  LGENVVRTVAMDGTEGLVRGEVCLDSGTPIRIPVGPKTLGRIINVIGEPIDERGPVG-SE 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P   +    ++   TGI+V+D+  P   G +IG+F G+G+GK+ L++    
Sbjct: 85  HYANIHAEAPNFEDMSTDQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLITELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        DN  K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYYEMITSGVISLKDNSSKVALVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VALTGLTVAEYFRDQEGQDVLFFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VD
Sbjct: 265 MQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVD 322

Query: 353 PLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      E   +   +  ++  ++  +DI  I G     +      V +  
Sbjct: 323 PLDSTSRIMDPNIVGQEHYGVARGVQKILQDYKSLQDIIAILGMDELSEDD-KLTVARAR 381

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL Q      + +VF     KL
Sbjct: 382 KIMRFLSQP---FQTAEVFTGTEGKL 404


>gi|295809870|emb|CBL85111.1| alpha subunit of ATPase [Vibrio tapetis]
 gi|295809872|emb|CBL85112.1| alpha subunit of ATPase [Vibrio tapetis]
 gi|295809874|emb|CBL85113.1| alpha subunit of ATPase [Vibrio tapetis]
 gi|295809876|emb|CBL85114.1| alpha subunit of ATPase [Vibrio tapetis]
          Length = 385

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/392 (24%), Positives = 164/392 (41%), Gaps = 24/392 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G N       + +  D V    +G    +  G  V   GR   +       
Sbjct: 1   MQGEMIELPGGN---YALALNLERDSVGAVVMGPYANLKEGMKVTGTGRILEVPVGPELL 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  LS  I    P  + R+ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLSSPIEVIAPGVIARKSVDQPVQTGYKAVDSMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  +     IGK+ L      +  D     I   +G++   +   +           ++V
Sbjct: 117 RELIIGDRQIGKTALAIDSIINQRDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTIV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIAD 326
             YP  VF    RLLER     +             + G++TA+  +     + +  +  
Sbjct: 237 EAYPGDVFYLHSRLLERAARVSEAYVEAFTNGEVKGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIVKKLSGGIRTALAQYRE- 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             +     +   +D    K +     + + +K
Sbjct: 356 --LAAFAQFSSDLDETTKKQLDHGQKVTELMK 385


>gi|87080772|dbj|BAE79342.1| ATP synthase beta subunit [Carteria palmata]
          Length = 376

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 163/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    +   +  + I   
Sbjct: 1   VAMNPTEGLMRGMEVLDTGKPLTVPVGKVTLGRIFNVLGEPVDNLGPVNAEE-KLPIHRL 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    L+A+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLTDSKVALVYGQMNEPPGARMRVALSALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP      + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPAVTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|21956128|dbj|BAC06428.1| ATP synthase beta-subunit [Volvox tertius]
 gi|31414561|dbj|BAC77260.1| beta subunit of ATP synthase [Volvox tertius]
          Length = 376

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARRIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|302747364|gb|ADL63163.1| Atp1 [Bruguiera gymnorhiza]
          Length = 349

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIIVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQYLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|119350509|gb|ABL63205.1| AtpB [Micractinium pusillum]
          Length = 392

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   D  + I
Sbjct: 5   VRAVAMSATDGLMRGMEVVDSGKPLNVPVGQATLGRIFNVLGEPVDNLGPVNNKDQ-LPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESGVINESNISESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|56236590|gb|AAV84662.1| ATP synthase beta subunit [Juniperus communis]
          Length = 421

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +       
Sbjct: 2   NKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPVDAL-TRS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +  ++               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +   +   +   +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEQHYETAQGVKQTLQRYKELQDIIAILGLDELSEDD-RLLVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|7688415|emb|CAB89732.1| ATP synthase beta subunit [Veratrum viride]
          Length = 488

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 49  GQQXNVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLG 108

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 109 EPVDDLGPVD-TRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 167

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 168 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVAL 227

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 228 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 287

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +   +G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 288 AVGYQPTLSTEMGSLQERI--TSTNEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 345

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R  A +G YP VDPL S S +        +  +    +     R++E +DI  I G   
Sbjct: 346 SRGFAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDE 405

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   +  FL Q 
Sbjct: 406 LSEED-RLTVARARKMERFLSQP 427


>gi|19033071|gb|AAL83520.1|AF408792_1 ATP synthase beta subunit [Chaetosphaeridium globosum]
          Length = 399

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 164/368 (44%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    ++
Sbjct: 1   DNKVRAVAMSATDGLMRGMDVIDTGSALSVPVGEVTLGRIFNVLGEPVDNMGPVNAT-VT 59

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     + 
Sbjct: 60  SPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNI 119

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 120 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLGESKVALVYGQMNEPPGARMRV 179

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 180 GLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGGL 239

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP
Sbjct: 240 QERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDP 297

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 298 LDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARARK 356

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 357 IERFLSQP 364


>gi|258406332|ref|YP_003199074.1| ATP synthase F1, beta subunit [Desulfohalobium retbaense DSM 5692]
 gi|257798559|gb|ACV69496.1| ATP synthase F1, beta subunit [Desulfohalobium retbaense DSM 5692]
          Length = 468

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/415 (26%), Positives = 197/415 (47%), Gaps = 17/415 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR----INLDIVYI 72
           + V  G I+ +      V      +   +    ++   N D    V+     +   +V  
Sbjct: 1   MSVNKGKIARVMGAVVDVDFTDGQLPELMSALDINNPNNQDASDLVVEVAQHLGDKVVRC 60

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR++N +G+P+D    +    ++M I  +
Sbjct: 61  IAMDATEGLVRGMEVVDTGKPISVPVGKPSLGRIMNVVGRPVDEAGPIDDS-ITMPIHRE 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  +++    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +   +   
Sbjct: 120 APELVDQNTAVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKEHGG 179

Query: 191 --IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  +  E+      +  + ++    +E P  R    LTA+T AEYF  
Sbjct: 180 KSVFAGVGERTREGNDLYEEMKEAGVINNAALIYGQMNEPPGARARVALTALTCAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +  ++VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 240 EEGEDVLLFIDNIFRFTQAGMEVSALLGRMPSAVGYQPTLGTDLGELQERI--TSTQKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  S LDG +VL+R +AE G YP VDPL S SR+ D    
Sbjct: 298 ITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVL 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +  ++ ++++ +DI  I G     D      V +   I  FL Q 
Sbjct: 358 GTEHYQVARGVQQVLQKYKDLQDIIAILGMEELSDED-KLTVSRARKIQRFLSQP 411


>gi|255658916|ref|ZP_05404325.1| ATP synthase F1, beta subunit [Mitsuokella multacida DSM 20544]
 gi|260848866|gb|EEX68873.1| ATP synthase F1, beta subunit [Mitsuokella multacida DSM 20544]
          Length = 470

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/409 (25%), Positives = 185/409 (45%), Gaps = 15/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIG 78
           G +  +      +   +  +  + + V  +GK S ++  V+     +   +     +   
Sbjct: 4   GKVVQVIGPVVDIEFPAGELPAILNAVTIKGKTSIDIDLVVEVMQHLGDSVTRCIAMSST 63

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + ++ G      G    +       GRV N LG+ +D + +         I    P    
Sbjct: 64  DGLTRGMEAVDTGNPIMVPVGTECLGRVFNVLGQTVDHNPAPVGNKEFWPIHRPAPKFDE 123

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           ++   +  +TGI+V+D+  P   G + G+F G+G+GK+ L+     +   +     + + 
Sbjct: 124 QETSAQVLETGIKVVDLIAPYSKGGKTGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAG 183

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
           VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF   +  +V
Sbjct: 184 VGERTREGNDLWGEMTESGVIDKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQHQDV 243

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V +
Sbjct: 244 LLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLSTDIGALQERI--TSTKNGSITSVQA 301

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP      + LD   VL+R +AE G YP VDPL S SR+ +      +  K
Sbjct: 302 VYVPADDLTDPAPAGTFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILNAEVLGEEHYK 361

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 VARGVQAVLQKYKELQDIIAILGMEELSDED-KLTVSRARKIQRFLSQP 409


>gi|154424901|emb|CAL18553.1| ATP synthase alpha subunit [Streptococcus salivarius]
          Length = 367

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 155/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFENG---AYGMAQNLESNDVGIIILGDFVAIREGDIVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  V      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELVIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKHGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|194751241|ref|XP_001957935.1| GF23766 [Drosophila ananassae]
 gi|190625217|gb|EDV40741.1| GF23766 [Drosophila ananassae]
          Length = 638

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 186/414 (44%), Gaps = 19/414 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGE 79
           + GYI ++      V    +    L    V        + +V   +  + V    +   E
Sbjct: 104 REGYIHAVIGPVIDVYFPEELPEVLNAMEVIDAPIGRLVLEVFHHLGNNTVRCVAMDSTE 163

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   R++      GR++N +G PID  + + K +    I ++ P  ++ 
Sbjct: 164 GLRRGQKVVDTGYPIRVAVGKSVLGRILNVVGDPIDDREPI-KSEFYSFIHNEAPELVDL 222

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +    
Sbjct: 223 TVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVGA 282

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-S 247
           GER RE  +   + +        D+  K V+V    +E P  R    LT +TIAEYF   
Sbjct: 283 GERTREGNDLYHEMIESKVISLEDDTSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDM 342

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
            G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+I
Sbjct: 343 DGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSI 400

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D     
Sbjct: 401 TSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDIVG 460

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++   +  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 461 EEHYNVARAVQKTLQSYKSLQDIIAILGMDELSEED-KLTVARARKMQRFLSQP 513


>gi|149236902|ref|XP_001524328.1| ATP synthase beta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146451863|gb|EDK46119.1| ATP synthase beta chain, mitochondrial precursor [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 415

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/375 (28%), Positives = 174/375 (46%), Gaps = 19/375 (5%)

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+IN  G PID    + +      I ++ P
Sbjct: 1   MDGTEGLVRGTEVTDTGAPISVPVGRGTLGRIINVTGDPIDDRGPI-ECKKRNPIHAEPP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S
Sbjct: 60  SFIEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFS 119

Query: 194 L---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +   VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEY
Sbjct: 120 VFTGVGERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEY 179

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 180 FRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTK 237

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D 
Sbjct: 238 KGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDA 297

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           A    +   + + +   +  ++  +DI  I G     +      V +   I  FL Q   
Sbjct: 298 AVVGQEHYDVATGVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP-- 354

Query: 423 DLSSEDVFQEITKKL 437
             +  +VF  I+ KL
Sbjct: 355 -FAVAEVFTGISGKL 368


>gi|4063566|gb|AAC98341.1| ATP synthase beta subunit [Simarouba glauca]
          Length = 456

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K    +GQ I +  ++        V    +   + ++ G      G    +       G 
Sbjct: 24  KGRXTVGQPINMTCEVQQLLGNNRVXAVAMXATDGLTRGMEXIDTGAPLXVPVGGATLGX 83

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+ +  P   G +I
Sbjct: 84  IFNVLGEPVDNLGPVX-TRTTSPIHKPAPAFIQLDTKLSIFETGIKVVXLLAPYRRGGKI 142

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +         I   VGER RE  +   +             
Sbjct: 143 GLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESGVINEQNIA 202

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 203 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 262

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 263 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 320

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 321 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 380

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 381 ILGLDELSEED-RLTVARARKIERFLSQP 408


>gi|213419050|ref|ZP_03352116.1| flagellum-specific ATP synthase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 372

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 147/367 (40%), Positives = 212/367 (57%), Gaps = 10/367 (2%)

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF--------RISPSACWCGRVINALGKP 112
           +V+  N   +++ P+   E I  G  V+             ++       GRV++  GKP
Sbjct: 7   EVVGFNGQRLFLMPLEEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKP 66

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           +DG  +    + +  +++     + R  +E   +TG+R I+    +  GQR+G+FAGSG+
Sbjct: 67  LDGLPAPDTLE-TGALITPPFNPLQRTPIEHVLETGVRAINALLTVGRGQRMGLFAGSGV 125

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231
           GKS LL M AR    D +++ L+GERGREV++FIE+ LG D   +SVV+ A +D SP+LR
Sbjct: 126 GKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLR 185

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
                 A  IAE F  +G +VLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP
Sbjct: 186 MQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLP 245

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L+ER G      G+ITA  +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +
Sbjct: 246 ALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAI 305

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           D  AS+SR      +      V     L+  F+  RD+  +G Y  G D +LDKA+   P
Sbjct: 306 DIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVGAYAKGSDPMLDKAITLWP 365

Query: 412 IIYDFLK 418
            +  FL+
Sbjct: 366 QLEAFLQ 372


>gi|63253251|dbj|BAD98412.1| beta subunit of ATP synthesis [Humata banksii]
 gi|63253255|dbj|BAD98415.1| beta subunit of ATP synthesis [Humata melanophlebia]
 gi|63253259|dbj|BAD98418.1| beta subunit of ATP synthesis [Humata parvula]
 gi|63253263|dbj|BAD98421.1| beta subunit of ATP synthesis [Humata aff. parvula CT1055]
          Length = 464

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|7706837|emb|CAB89903.1| ATP synthase beta subunit [Alvaradoa amorphoides]
          Length = 476

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/388 (27%), Positives = 170/388 (43%), Gaps = 26/388 (6%)

Query: 55  NSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             D  GQ I +  ++        V    +   + +  G  V   G    +       GR+
Sbjct: 49  GRDTAGQQINVTCEVQQLLGXXRVRAVAMSATDGLMRGMEVIDTGAPXSVPVGGSTLGRI 108

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+PID    +     +  I    P  +        F+TGI+V+D+  P   G +IG
Sbjct: 109 FNVLGEPIDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIG 167

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------L 214
           +F G+G+GK+ L+     +       +S+ G   ER RE  +   +              
Sbjct: 168 LFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAE 227

Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273
            K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   
Sbjct: 228 SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALL 287

Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333
           G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD
Sbjct: 288 GRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLD 345

Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-KKLVSSLTHLIHRFEETRDIRLI 392
              VL+R LA +G YP VDPL S S +        E  +    +   + R++E +DI  I
Sbjct: 346 ATTVLSRGLAAQGIYPAVDPLDSTSTMLQPRIVGXEXYETAQRVKQTLXRYKELQDIIAI 405

Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            G     +      V +   I  FL Q 
Sbjct: 406 LGLDELSEED-RLTVARARKIERFLSQP 432


>gi|84622325|ref|YP_449697.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|122879043|ref|YP_199371.6| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188578711|ref|YP_001915640.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|118573780|sp|Q2P7Q4|ATPB_XANOM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|118573781|sp|Q5H4Y4|ATPB_XANOR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740691|sp|B2SQB0|ATPB_XANOP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|84366265|dbj|BAE67423.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188523163|gb|ACD61108.1| ATP synthase F1, beta subunit [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 468

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRNEVPKVYHALKVEGTEITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    L  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLLATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD----- 250
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKG 239

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|5758860|gb|AAD50834.1| ATP synthase beta subunit [Canna indica]
          Length = 496

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + ++ G  V   G    +       G 
Sbjct: 50  KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGP 109

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
             N LG+P+D    +     S  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 110 NFNVLGEPVDNLGPVDTXTTS-PIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 228

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 288

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 289 LGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 346

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 406

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 407 ILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|5001589|gb|AAD37041.1|AF092115_1 ATP synthase beta subunit [Kingdonia uniflora]
          Length = 475

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + ++ +G   DN+GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFSPGKMPXIYNALIVKG--RDNVGQKIHMTCEVQQLLGNNRVRAIA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MRATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D   P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIELDTKLSIFETGIKVVDHLAPXRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF    +  +L  +D+I RF  +  E++   G +P A GY  ++ +E+    ER   + 
Sbjct: 238 EYFRDVNEPNVLLFIDNIFRFVQAGSEVSXLLGRMPSAVGYQPTLSTEMGTXQER--XTX 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKKGSITSIXAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|46909269|gb|AAT06152.1| ATP synthase beta subunit [Priapulus caudatus]
          Length = 427

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/386 (27%), Positives = 175/386 (45%), Gaps = 20/386 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G +    G    I       GR++N +G+PID    +    
Sbjct: 26  LGGNAVRTIAMDGTEGLVRGQVCVDTGSSISIPVGPETLGRIMNVIGEPIDERGPI-TTK 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P        ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  HKASIHAEAPEFAEMSTEQEILETGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D   K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VD
Sbjct: 265 MQERI--TTTTKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVD 322

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S+SR+ D      D       +  ++  ++  +DI  I G     +    + V +  
Sbjct: 323 PLDSISRIMDPNIVGRDHYDTARGVQKILQDYKSLQDIIAILGMDELSETD-KQVVSRAR 381

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL Q        +VF     KL
Sbjct: 382 KIQKFLSQP---FQVAEVFTGSAGKL 404


>gi|63253175|dbj|BAD98355.1| beta subunit of ATP synthesis [Davallia corniculata]
          Length = 464

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|63253163|dbj|BAD98346.1| beta subunit of ATP synthesis [Davallodes borneense]
          Length = 464

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|62902833|gb|AAY19331.1| ATP synthase beta subunit [Perrottetia longistylis]
          Length = 475

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+   LG+P+D    +     +  I    P
Sbjct: 61  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFXVLGEPVDNLGPVX-TRTTSPIHXSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+ +  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVXLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 416


>gi|302747588|gb|ADL63275.1| Atp1 [Phyllonoma laticuspis]
          Length = 349

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAVGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|149384391|gb|ABR25018.1| ATP synthase beta chain [Asplenium feei]
          Length = 426

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K   V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVASVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLPRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|63253275|dbj|BAD98430.1| beta subunit of ATP synthesis [Humata vestita]
          Length = 464

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|20467389|gb|AAL27825.1| ATPase beta subunit [Ephedra andina]
          Length = 461

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 32  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 91

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 92  EPVDNLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 150

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 151 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIIESKVAL 210

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 211 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 270

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 271 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 328

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 329 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 388

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 389 LSEED-RLTVARARKIERFLSQP 410


>gi|25010936|ref|NP_735331.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae NEM316]
 gi|81845628|sp|Q8E5U8|ATPB_STRA3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|23095315|emb|CAD46525.1| H+-transporting ATP synthase beta chain [Streptococcus agalactiae
           NEM316]
          Length = 468

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 176/365 (48%), Gaps = 10/365 (2%)

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGK 121
           + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID ++   +
Sbjct: 49  LELGDGLVRTIAMESTDGLTRGLEVLDTGRAISVPVGKDTLGRVFNVLGDAIDLEEPFAE 108

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+   
Sbjct: 109 DAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQEL 168

Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237
             +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    LT
Sbjct: 169 IHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALT 228

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ER
Sbjct: 229 GLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQER 288

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS
Sbjct: 289 I--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLAS 346

Query: 357 VSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            SR L  +    +  ++ + +  ++ R+ E +DI  I G     D      V +   I  
Sbjct: 347 SSRALTPEIVGDEHYEVATEVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQF 405

Query: 416 FLKQS 420
           FL Q+
Sbjct: 406 FLSQN 410


>gi|309390205|gb|ADO78085.1| ATP synthase F1 subcomplex beta subunit [Halanaerobium praevalens
           DSM 2228]
          Length = 470

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 186/408 (45%), Gaps = 15/408 (3%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS--DNLGQVIR-INLDIVYICPVGIGE 79
           G +  +      +     +   + + +  + +    D   +V++ +  D V    +   +
Sbjct: 7   GRVVQVIGPVVDIEFPDGKLPKIYNAIKIENQEKEIDLTCEVMQQLGDDRVRSVAMSSTD 66

Query: 80  EISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G   V               GRV N LG+ ID    +G  D  M I    P    +
Sbjct: 67  GLVRGMEAVDQGDPISAPVGEAVLGRVFNVLGETIDNRGEVG-TDERMPIHRPAPKFEEQ 125

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
           +   + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +     + S V
Sbjct: 126 ESSTELFETGIKVIDLLAPYTRGGKVGLFGGAGVGKTVLIQELINNIATEHGGYSVFSGV 185

Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   ++   D L K  +V    +E P  R    LT +T+AEYF  +   +VL
Sbjct: 186 GERTREGNDLWLEFQEADILDKVAMVFGQMNEPPGARMRVGLTGLTMAEYFRDEAGQDVL 245

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++  ++  L ERI  +  +KG+IT+V +V
Sbjct: 246 LFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLAYDVGTLQERI--TSTKKGSITSVQAV 303

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKL 372
            V  D+  DP   +  + LD   VL+R + E+G YP VDPL S S + D     D    +
Sbjct: 304 YVPADDLTDPAPATTFAHLDATTVLSRDIVEKGIYPAVDPLDSTSNILDPRIIGDEHYDV 363

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++  +++ +DI  I G     +      V++   I  FL Q 
Sbjct: 364 AREVQEILQEYKDLQDIIAILGMDELSEED-KIVVNRARRIERFLSQP 410


>gi|183220359|ref|YP_001838355.1| flagellum-specific ATP synthase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910474|ref|YP_001962029.1| endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167775150|gb|ABZ93451.1| Endoflagellar biosynthesis/type III secretory pathway ATPase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778781|gb|ABZ97079.1| Flagellum-specific ATP synthase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 454

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 149/403 (36%), Positives = 224/403 (55%), Gaps = 12/403 (2%)

Query: 41  QYVCLGDFV-VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISP 97
               +G+ + V +G +   L  V +     +  + P+G  +EI     VF  GR   ++ 
Sbjct: 46  PDSKVGEILEVERGSDKGYLACVLVGFKDHLYTLMPLGDTQEIFPHAFVFSSGRQITLNA 105

Query: 98  SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157
                GRV+N LGKPID    L   +       +    ++R  +    +TG+R ID    
Sbjct: 106 GPELLGRVLNGLGKPIDNKGILITKEERAS-EPRFLNPLDRPPITDILETGVRAIDGMLT 164

Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKK 216
           +  GQRIG+F+GSG+GKS+LL M AR    D  +++L+GERGREV EF+  +   + L +
Sbjct: 165 VGRGQRIGIFSGSGVGKSSLLGMIARYTNADVNVVALIGERGREVNEFLHVELGKEALAR 224

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           SVV VATSD S + +      A + AEYF  KG +V L +DS+TR+A ++RE   + GE 
Sbjct: 225 SVVFVATSDSSKMEQVSCANLACSAAEYFREKGMSVNLYMDSLTRYAEALRE--LSIGEP 282

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSILDGH 335
            V +GY +SVFS++ +L+ER G +    G+IT   +VL D  D+ +D +AD VR  +DGH
Sbjct: 283 VVTKGYASSVFSKMAKLVERAG-TSHNGGSITGFYTVLTDAEDDMDDIVADKVRGFIDGH 341

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           IVL R LAE+  YP +D  AS+SRL  K  + D     S +  LI +++ + DI L+  Y
Sbjct: 342 IVLTRKLAEQSHYPAIDVPASLSRLMQKIVNEDHYMRASIVRELISKYKNSEDIILLNAY 401

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             G D  +D A+ +   I D+L+Q   + SS   + E  K+L+
Sbjct: 402 VRGADEKIDMAIDKKSQIDDYLRQRIEEKSS---YNEAIKRLE 441


>gi|112791404|gb|ABI21972.1| ATP synthase beta subunit [Erwinia amylovora]
          Length = 421

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 173/362 (47%), Gaps = 10/362 (2%)

Query: 65  INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G + V       +       GR++N LG+PID    +G+ +
Sbjct: 22  LGGGVVRTIAMGSSDGLKRGLEAVDLQHPIEVPVGTATLGRIMNVLGEPIDMKGDIGEEE 81

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++   +   +TGI+VID+  P   G ++G+F G+G+GK+  +    R
Sbjct: 82  -RWAIHRSAPSYEDQSNSQDLLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIR 140

Query: 184 SDCFD---KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +F  +    N + K  +V    +E P  R    LT +
Sbjct: 141 NIAAEPSGFSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGL 200

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  
Sbjct: 201 TMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 258

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT+V +V V  D+  DP   +  + LD  +VL+R +A  G YP VDPL S SR
Sbjct: 259 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 318

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
             D      +       +  L+ R++E +DI  I G     +      V +   +  FL 
Sbjct: 319 QLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILGMDELSEED-KLVVARSRKMQRFLS 377

Query: 419 QS 420
           Q 
Sbjct: 378 QP 379


>gi|149384657|gb|ABR25137.1| ATP synthase beta chain [Lindsaea blotiana]
          Length = 426

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPV-ESS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV-----------VVATSDESPILRK 232
           +       +S+ G  G   RE  + Y+     K +            V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINEKNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT+  +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSTQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAISGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 357 RKVERFLSQP 366


>gi|20467369|gb|AAL27815.1| ATPase beta subunit [Ephedra frustillata]
          Length = 458

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 29  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 88

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 89  EPVDNLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 147

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 148 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIIESKVAL 207

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 208 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 267

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 268 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 325

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 326 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 385

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 386 LSEED-RLTVARARKIERFLSQP 407


>gi|63253159|dbj|BAD98343.1| beta subunit of ATP synthesis [Araiostegia yunnanensis]
          Length = 464

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGKMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    + +   +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPV-QSSTTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|20467379|gb|AAL27820.1| ATPase beta subunit [Ephedra californica]
          Length = 449

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 27  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 86

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 87  EPVDNLGPIDTS-TTFPIHRPAPAFSQLXINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 145

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 146 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIIESKVAL 205

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 206 VYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 265

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 266 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 323

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 324 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 383

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 384 LSEED-RLTVARARKIERFLSQP 405


>gi|220910365|ref|YP_002485676.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 7425]
 gi|254808143|sp|B8HP55|ATPB_CYAP4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219866976|gb|ACL47315.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7425]
          Length = 485

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 191/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           GYI+ I      +   S  +  + + ++ +GKN          +V ++  D  V    + 
Sbjct: 11  GYITQIIGPVLDIEYPSGKMPQIYNALLIRGKNQAGDEVSVTCEVQQLLGDKQVRAVSMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D   ++   + +  I    P  
Sbjct: 71  STDGLVRGMEVIDTGAPISVPVGTITLGRIFNVLGEPVDEKGTVN-SETTFPIHRAAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            N +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +       +S+ 
Sbjct: 130 TNLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATKHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   + +  N          K  +V    +E P  R    L+A+T+AEY
Sbjct: 190 GGVGERTREGNDLYNEMIESNVINKDDPSQSKIALVYGQMNEPPGARMRVGLSALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 250 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTN 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   K   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 GIVGEAHYKTARAVQATLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 424


>gi|149798701|gb|ABR32041.1| ATP synthase beta chain [Monogramma graminea]
          Length = 426

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTNEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF       +L  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|11559340|dbj|BAB18828.1| ATP synthase beta-subunit [Volvulina steinii]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGTV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|55822457|ref|YP_140898.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus
           CNRZ1066]
 gi|116627376|ref|YP_819995.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus LMD-9]
 gi|81820338|sp|Q5M104|ATPB_STRT1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122268023|sp|Q03LX3|ATPB_STRTD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|20070093|gb|AAM01190.1| H+-ATPase cytoplasmic F1-part beta-subunit [Streptococcus
           thermophilus]
 gi|55738442|gb|AAV62083.1| proton-translocating ATPase, beta subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116100653|gb|ABJ65799.1| F0F1-type ATP synthase, beta subunit [Streptococcus thermophilus
           LMD-9]
 gi|312277889|gb|ADQ62546.1| Proton-translocating ATPase beta subunit [Streptococcus
           thermophilus ND03]
          Length = 468

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 187/413 (45%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V       +   V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVAFATGDKLPEINNALVVYTDEEKSRRIVLEVALELGEGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID +           I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDMEAPFADDAEREPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERSREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR         
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVATEVQRVLQRYRELQDIIAILGMDELSDED-KTLVGRARRIQFFLSQN 410


>gi|294155618|ref|YP_003560002.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145]
 gi|291600077|gb|ADE19573.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145]
          Length = 466

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/363 (30%), Positives = 176/363 (48%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  D V    +     +S G  V   G    +       GR+ + LG PID   S     
Sbjct: 49  IGDDTVRSISMVSTNGLSRGLEVIDTGAPISVPVGNEVLGRMFDVLGNPIDLLPSQKWNK 108

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L+  I +  P    ++   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 109 LN-PIHALPPTYEEQKSTSEILETGIKVIDLLIPYSKGGKIGLFGGAGVGKTVLVQELIN 167

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +   +     +  K+ +V    +E P  R    LT +
Sbjct: 168 NIATEHNGLSVFAGVGERTREGNDLYHEMKAAGVLDKTALVFGQMNEPPGARMRVALTGL 227

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 228 TMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 286

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   +G+IT+V +V V  D+  DP   +  + LD   VL+R++A  G YP +DPL S S
Sbjct: 287 -TSTRRGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVLDRNIAALGIYPAIDPLTSSS 345

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           RL D      +   +   + +++ RF+E +DI  I G     +    K V +   I +FL
Sbjct: 346 RLLDPLVVGNEHYNVAQGVLNILQRFKELQDIIAILGMGELSEED-KKIVARARRIRNFL 404

Query: 418 KQS 420
            Q 
Sbjct: 405 SQP 407


>gi|241912864|gb|ACS72110.1| AtpB [Kreodanthus simplex]
          Length = 489

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGASLSVPFGGATLGRIFNVLGEPVDNLGPVD-IRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINTIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +   +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEKHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|154173677|ref|YP_001408809.1| F0F1 ATP synthase subunit beta [Campylobacter curvus 525.92]
 gi|190358268|sp|A7H017|ATPB_CAMC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|112803722|gb|EAU01066.1| ATP synthase F1, beta subunit [Campylobacter curvus 525.92]
          Length = 465

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 192/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G IS +      V        + + +      +GK +  + +V     D  V    + + 
Sbjct: 3   GVISQVMGPVVDVDFNDYLPKINEAIEVYFEVEGKKNRLILEVAAHLGDNRVRTIAMDMS 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G      G    +       GR+ N +G  ID  + + + D    I    PP   
Sbjct: 63  EGLTRGLEATALGAPISVPVGEKVLGRIFNVVGDLIDEGEGV-EFDKHWSIHRDPPPFEE 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGAEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      D  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPQILGEDHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQAVLQKYKDLQDIIAILGMDELSEED-KLTVDRARKIERFLSQP 407


>gi|110632469|ref|YP_672677.1| FliI/YscN family ATPase [Mesorhizobium sp. BNC1]
 gi|110283453|gb|ABG61512.1| type III secretion system ATPase, FliI/YscN [Chelativorans sp.
           BNC1]
          Length = 429

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 164/425 (38%), Positives = 232/425 (54%), Gaps = 12/425 (2%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPV 75
           K    + G +S                C+G+       N D  L +V+  +     + P 
Sbjct: 8   KRPFRRRGRVSKAVGPVVRAAG---NFCVGEICAVSRSNGDPILAEVVGFDQGEAILTPY 64

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    IS    +      F +       GRVI+A+GKPID   S+             P 
Sbjct: 65  GGTAGISHNSTIEPLMSTFEVPVGEELTGRVIDAMGKPIDAGPSVTSCAF-YPGHRTAPN 123

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            M R  +++ F  G+RV+D       GQR+G+FA +G GKSTL+S+  R   +D+ +I+L
Sbjct: 124 PMLRPTIDRPFILGVRVLDGALTCGEGQRMGIFAAAGGGKSTLVSLMVRFAEYDRCVIAL 183

Query: 195 VGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           +GERGREVREF+E  LG   L KS+VVVATSD   I +  A  TA  +AE+   +G+ VL
Sbjct: 184 IGERGREVREFLEHQLGPTGLAKSIVVVATSDRPAIEQVKAAYTATALAEFHRDRGERVL 243

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           LI+DS+TRFA + R+I   +GE P  RG+P SVF  LP L+ER G S    G+ITA  +V
Sbjct: 244 LIMDSLTRFARAQRQIGLAAGEPPTRRGFPPSVFELLPGLVERAGLSGD--GSITAFYTV 301

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           LV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YPPVD + S SR+  +  S D  + V
Sbjct: 302 LVEGDDMNEPVADEVRSLLDGHIVLSRKLAEAGHYPPVDVITSTSRILSRIVSPDHLEAV 361

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
                L+ + +E   +  IG Y  G D + D+A+ +   +  FL+Q  ++ SS   F+E 
Sbjct: 362 HKARGLMSKLQEIELLLKIGEYSKGADALADEALARRTALDAFLRQGVNEFSS---FEET 418

Query: 434 TKKLQ 438
              L+
Sbjct: 419 VIALK 423


>gi|150187261|emb|CAK30209.1| ATP synthase alpha subunit [Streptococcus parauberis]
 gi|154424965|emb|CAL18585.1| ATP synthase alpha subunit [Streptococcus parauberis]
          Length = 367

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AFGMAQNLESNDVGIIILGDFSSIREGDIVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGEIATTGFR-PVETPAPGVMQRKSVFEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        +   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICVYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASAAQPSPLLFIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|183206522|gb|ACC54459.1| ATP synthase beta subunit [Triodanis coloradoensis]
          Length = 477

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 112/389 (28%), Positives = 175/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D LGQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDXLGQPIDVXCEVQQLLGNNRVRAVAMSATDGLMRGLEVIDTGTPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+PID    +     S  I    P  ++       F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPIDNLGPVDTLTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +  ++             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKXHGGVSVFGGVGERTREGNDLYKEMKDSGVINEQNFA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAX 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +      S +  K   S+   + R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQDIIT 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEDD-RLTVARXXKIERFLSQP 413


>gi|158602261|gb|ABW74597.1| ATP synthase beta subunit [Actaea simplex]
          Length = 476

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D +GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 28  KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGLEVIDTGAPLSVPVGGATLGR 87

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 88  IFNVLGEPVDNLGPVD-TRTTXXIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 146

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 147 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 206

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 207 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 266

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 267 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPARATTFAHL 324

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 325 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 384

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 385 ILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|161507276|ref|YP_001577230.1| F0F1 ATP synthase subunit beta [Lactobacillus helveticus DPC 4571]
 gi|172048219|sp|A8YUK1|ATPB_LACH4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|160348265|gb|ABX26939.1| ATP synthase beta subunit [Lactobacillus helveticus DPC 4571]
 gi|328468723|gb|EGF39705.1| F0F1 ATP synthase subunit beta [Lactobacillus helveticus MTCC 5463]
          Length = 479

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 184/379 (48%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V + +N   + +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSENESIVLEVTVELGDGVLRTIAMESTDGLRRGMKVEDTGGPISVPVGEDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPAFSKDHPRESIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   +  FL Q+
Sbjct: 391 E-KLIVARARKVQFFLSQN 408


>gi|21956014|dbj|BAC06377.1| ATP synthase beta-subunit [Vitreochlamys aulata]
 gi|21956016|dbj|BAC06378.1| ATP synthase beta-subunit [Vitreochlamys aulata]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P   +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFADLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +  S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDIAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|256370958|ref|YP_003108782.1| ATPase, FliI/YscN family [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007542|gb|ACU53109.1| ATPase, FliI/YscN family [Acidimicrobium ferrooxidans DSM 10331]
          Length = 436

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 164/421 (38%), Positives = 240/421 (57%), Gaps = 9/421 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGE 79
           V+ G +S I  ++  V  +     +G+ V  + G     + +V+    + +   P+    
Sbjct: 17  VRQGRVSRIVGIHLEVEGVE--AGIGEAVRIELGGGQSLVAEVVGFEGERLVCMPLREVR 74

Query: 80  EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  GD      R  +I       GRVI+A G PIDG   +   D+ + +    P  M R
Sbjct: 75  GVRYGDRAVALRRATQIPVGRALLGRVIDADGVPIDGQGPVEPDDV-VGLELAAPMPMER 133

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
             +++    G+RV+D   P   GQR+GVFAG+G+GKS+LLSM  R    D  +++LVGER
Sbjct: 134 TLIDEQLGLGVRVLDTMVPCGVGQRLGVFAGAGVGKSSLLSMVVRGADVDVRVVALVGER 193

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREF+  D   + + +SVVVVATSDE P++R  A + A  IAE+F + G  VLL++D
Sbjct: 194 GREVREFLEHDLGPEGMARSVVVVATSDEPPLVRVRAAIAATRIAEWFRASGARVLLVMD 253

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR A + RE+  ++GE P  RGYP SVF  + +LLER G      G+IT + SVLV+G
Sbjct: 254 SLTRLALAQRELGLSAGEPPSVRGYPPSVFRLMAQLLERAG--TDHVGSITGIYSVLVEG 311

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           D+ +DPIAD+ RS+LDGHIVL+R LA  GRYP VD LAS+SRL       D ++L+ +  
Sbjct: 312 DDLDDPIADAARSVLDGHIVLSRQLANRGRYPAVDVLASLSRLESSILPDDRRRLMQAAR 371

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEITKK 436
             +   +E RD+  +G Y+ G  + +D+A+  VP I     Q  S+ S   D +  +   
Sbjct: 372 RHLAVLDEVRDLVDLGAYQAGTSMEVDEALEVVPRIETVFGQDISERSDPNDAWSRLAGA 431

Query: 437 L 437
           L
Sbjct: 432 L 432


>gi|14020797|dbj|BAB47543.1| ATP synthase beta-subunit [Eudorina minodii]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APSFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|163814609|ref|ZP_02205998.1| hypothetical protein COPEUT_00760 [Coprococcus eutactus ATCC 27759]
 gi|158450244|gb|EDP27239.1| hypothetical protein COPEUT_00760 [Coprococcus eutactus ATCC 27759]
          Length = 453

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/360 (28%), Positives = 175/360 (48%), Gaps = 11/360 (3%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   E +S    V   G   ++       GR+ N LG+ IDG + L   +   
Sbjct: 41  NTVRCIMLSASEGLSRDMEVVATGSGIKVPVGNQTLGRLFNVLGETIDGKEDLSDTE-HW 99

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I  + P   N+  V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    ++  
Sbjct: 100 VIHREPPTFENQSPVIEILETGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELIQNIA 159

Query: 187 FDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242
                 S+   VGER RE  +   +      + K+ +V    +E P  R     T +T+A
Sbjct: 160 SVHGGYSIFTGVGERSREGNDLWTEMSESGVIDKTALVFGQMNEPPGARMRVAETGLTMA 219

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E+++  G +P A GY  ++ +E+  L ERI    
Sbjct: 220 EYFRDVNHQDVLLFIDNIFRFTQAGSEVSSLLGRMPSAVGYQPTLANEMGELQERIA--S 277

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G++T+V +V V  D+  DP   +  + LD + VL+R + E+G YP VDPL S SR+ 
Sbjct: 278 TKEGSVTSVQAVYVPADDLTDPAPATTFAHLDANTVLSRKIVEQGIYPAVDPLESSSRIL 337

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      +  ++   +  ++ +++E +DI  I G     D      V +   +  FL Q 
Sbjct: 338 EADIVGEEHYEVARRVQEILQKYKELQDIIAILGMEELSDED-KLTVTRARKVQKFLSQP 396


>gi|55056910|emb|CAF21956.1| ATP synthase beta subunit [Taxus brevifolia]
          Length = 437

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G +V   G    +       GR+ N LG+P+D    +    
Sbjct: 32  LGNNKVRAVAMSATDGLMRGMIVIDTGAPLSVPVGETTLGRIFNVLGEPVDDLGPVNALT 91

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 92  TS-PIHRSAPAFTQLDXKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 150

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +  ++               K  +V    +E P  R 
Sbjct: 151 NIAKAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARM 210

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 211 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 270

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP V
Sbjct: 271 SLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAV 328

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 329 DPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 387

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 388 RKIERFLSQP 397


>gi|302747396|gb|ADL63179.1| Atp1 [Chrysolepis sempervirens]
 gi|302747610|gb|ADL63286.1| Atp1 [Quercus alba]
          Length = 349

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRAASESETLYCVYVAVGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|23503593|dbj|BAC20393.1| ATP synthase beta-subunit [Chloromonas augustae]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K D ++ I   
Sbjct: 1   VSMNPSDGLTRGIEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KADTALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|4519278|dbj|BAA75554.1| ATP synthase beta-subunit [Volvox barberi]
 gi|11559346|dbj|BAB18831.1| ATP synthase beta-subunit [Pandorina morum]
 gi|297306750|dbj|BAA75580.2| ATP synthase beta-subunit [Pandorina colemaniae]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|4519294|dbj|BAA75562.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519296|dbj|BAA75563.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519298|dbj|BAA75564.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519300|dbj|BAA75565.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|4519302|dbj|BAA75566.1| ATP synthase beta-subunit [Eudorina illinoisensis]
 gi|4519342|dbj|BAA75586.1| ATP synthase beta-subunit [Eudorina cylindrica]
 gi|14020799|dbj|BAB47544.1| ATP synthase beta-subunit [Eudorina illinoisensis]
 gi|14020803|dbj|BAB47546.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|14020805|dbj|BAB47547.1| ATP synthase beta-subunit [Eudorina elegans]
 gi|21956004|dbj|BAC06372.1| ATP synthase beta-subunit [Volvox gigas]
 gi|21956008|dbj|BAC06374.1| ATP synthase beta-subunit [Volvox africanus]
 gi|21956136|dbj|BAC06430.1| ATP synthase beta-subunit [Volvox carteri f. weismannia]
 gi|116256380|dbj|BAF35221.1| ATP synthase beta subunit [Volvox powersii]
 gi|116256400|dbj|BAF35231.1| ATP synthase beta subunit [Pleodorina starrii]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|255321979|ref|ZP_05363129.1| ATP synthase F1, beta subunit [Campylobacter showae RM3277]
 gi|255301083|gb|EET80350.1| ATP synthase F1, beta subunit [Campylobacter showae RM3277]
          Length = 465

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 192/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G IS +      V        + + V      +GK +  + +V     D  V    + + 
Sbjct: 3   GIISQVMGPVVDVDFTDYLPKINEAVEVNFEVEGKQNRLVLEVAAHLGDNRVRTIAMDMS 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G      G    +       GR+ N +G  ID  + + + D    I    PP   
Sbjct: 63  EGLTRGLEATALGAPISVPVGEKVLGRIFNVVGDLIDEGEGV-EFDKKWSIHRDPPPFEE 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYHEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGAEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPQILGGEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQAVLQKYKDLQDIIAILGMDELSEED-KVTVDRARKIERFLSQP 407


>gi|167748908|ref|ZP_02421035.1| hypothetical protein ANACAC_03682 [Anaerostipes caccae DSM 14662]
 gi|317472680|ref|ZP_07931995.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
 gi|167651530|gb|EDR95659.1| hypothetical protein ANACAC_03682 [Anaerostipes caccae DSM 14662]
 gi|316899857|gb|EFV21856.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA]
          Length = 466

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 191/409 (46%), Gaps = 13/409 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIG 78
           ++ G I  +      V     Y+  + D +  +      + +  +   +  V    +   
Sbjct: 1   MEKGKIVQVLGPVVDVEFDGGYLPLIKDALTVELDGKKLVMEAAQHMGNNIVRCILLASS 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +S    V   G    +       GR+ N LG+ IDG + + +G+    I    P    
Sbjct: 61  EGLSKDMEVTATGAGITVPVGRQTLGRMFNVLGQNIDGKEQV-EGEEQWVIHRDPPTFEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194
           +  V +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +    S+   
Sbjct: 120 QSPVVEILETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNV 252
           VGER RE  +   +      + K+ +V    +E P  R     T +T+AEYF  +   NV
Sbjct: 180 VGERSREGNDLWTEMNESGVIDKTALVFGQMNEPPGARMRVAQTGLTMAEYFRDREHQNV 239

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +
Sbjct: 240 LLFIDNIFRYVQAGSEVSALLGRMPSAVGYQPTLANEVGELQERI--TSTKNGSITSVQA 297

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  +
Sbjct: 298 VYVPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEAEVVGEEHYE 357

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  L+ +++E +DI  I G    +D     AV++   I  FL Q 
Sbjct: 358 VAMQVQELLQKYKELQDIISILGMEE-LDEDDKLAVYRARKIQKFLSQP 405


>gi|21231371|ref|NP_637288.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66768576|ref|YP_243338.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113034|gb|AAM41212.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573908|gb|AAY49318.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 458

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 144/412 (34%), Positives = 222/412 (53%), Gaps = 4/412 (0%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
            +V  T+        +G     +        +V+  + +  Y+ P      +     V  
Sbjct: 45  RAVGLTLEATGCEAPMGATCKVEVDGGWVDAEVVGFSGERTYLMPSAELHGLLPNARVVP 104

Query: 90  WGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
             R   +       GRVI++ G P+DG   + + + S+ +       + R+ +      G
Sbjct: 105 SRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RAEGSVGMAGVSINPLAREPITTSLDVG 163

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-E 207
           +R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+  
Sbjct: 164 VRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVET 223

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               + L+++VVV A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + R
Sbjct: 224 TLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQR 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+
Sbjct: 284 EIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADA 343

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            R+ILDGHI+L+R +A+ G YP +D  +SVSR+     +   +  +  L  L+  +   R
Sbjct: 344 ARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIANDTWRLRIRKLKRLLSAYTANR 403

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEITKKLQ 438
           D+  IG Y+ G D   D+A+ + P I DFL Q     S   D    + + ++
Sbjct: 404 DLIAIGAYQRGSDPATDEALARWPEIVDFLGQDVHKASDLTDSLSALQRLVE 455


>gi|117926732|ref|YP_867349.1| F0F1 ATP synthase subunit beta [Magnetococcus sp. MC-1]
 gi|254808157|sp|A0LDA0|ATPB_MAGSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|117610488|gb|ABK45943.1| ATP synthase F1 subcomplex beta subunit [Magnetococcus sp. MC-1]
          Length = 474

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 18/368 (4%)

Query: 67  LDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + +  G  V   G   R+       GR++N +G+P D    +   + +
Sbjct: 51  EGTVRAIAMDSTDGVVRGMEVTDTGDTIRVPVGRQTLGRILNVVGEPQDEKGPVETTE-T 109

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
           + I    P    +    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     + 
Sbjct: 110 LPIHRPAPAFAQQATSAEILETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNV 169

Query: 186 CFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
             +     + + VGER RE  +   +               K+ ++    +E P  R   
Sbjct: 170 AQEHGGYSVFAGVGERTREGNDLYHEMAESGVIDPNSWENSKAALIYGQMNEPPGARARV 229

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF    G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L
Sbjct: 230 ALTGLTVAEYFRDLGGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLGTDMGAL 289

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  ++   G+IT+V +V V  D+  DP   +  S LD   VLNR+++E G YP VDP
Sbjct: 290 QERITTTKT--GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLNRAISEMGIYPAVDP 347

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +       +  ++  ++  +DI  I G     +      V++   
Sbjct: 348 LDSTSRVLDPKVVGEEHYHTAREVQRILQTYKSLQDIIAILGMDELSEED-KLVVNRARK 406

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 407 IQRFLSQP 414


>gi|281209914|gb|EFA84082.1| ATP synthase beta chain [Polysphondylium pallidum PN500]
          Length = 704

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/393 (26%), Positives = 182/393 (46%), Gaps = 27/393 (6%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    + I + +S G +V + G   ++       GR++N  G+PIDG   +   +
Sbjct: 187 LGDGVVRCVALEITDGLSRGTVVQNTGAPLKVPVGRPTLGRIMNVTGEPIDGCGPIKASE 246

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I  + P         +   TGI+VID+ TP   G +IG+F G+G+GK+ L+     
Sbjct: 247 -RLPIWREPPKFDELAPSAEILVTGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIQELIN 305

Query: 184 SDCFDKVIISL---VGERGREVREFIEDY--------------LGDNLKKSVVVVATSDE 226
           +        S+   VGER RE  +   +                     K  +V    +E
Sbjct: 306 NVAKSHGGFSVFTGVGERTREGNDLYHEMVTAGVIKLQGSGETFSTEGSKVSLVFGQMNE 365

Query: 227 SPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
            P  R    LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  +
Sbjct: 366 PPGARARVTLTGLTVAEYFRDAENQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPT 425

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           + +++  + ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+R+++E 
Sbjct: 426 LATDMGSMQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAVSEL 483

Query: 346 GRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           G YP VDPL S S + D      +  K  + +  ++  ++  +DI  I G     +    
Sbjct: 484 GIYPAVDPLDSTSLMLDPNIIGEEHYKTATDVQKILQEYKGLQDIIAILGMDDLSEEQ-K 542

Query: 405 KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
             V++   I  FL Q P +++  + F  +   L
Sbjct: 543 TTVYRARKIQRFLSQ-PFEVA--EAFTNMKGAL 572


>gi|269784280|emb|CBH50785.1| alpha subunit of ATPase [Vibrio sp. C 2.4]
          Length = 399

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/408 (23%), Positives = 171/408 (41%), Gaps = 26/408 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G         + +N D V    +G   ++  G  V   GR   +       
Sbjct: 1   MQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEML 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  V      GK+ +   ++  + D     I   +G++   +   +           +VV
Sbjct: 117 RELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIAD 326
             +P  VF    RLLER     +             + G++TA+  +     + +  +  
Sbjct: 237 EAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYREL 356

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
                   +   +D    K +     + + +KQ     +   VF +  
Sbjct: 357 ---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 399


>gi|149384743|gb|ABR25180.1| ATP synthase beta chain [Pityrogramma jamesonii]
          Length = 426

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149798691|gb|ABR32036.1| ATP synthase beta chain [Haplopteris elongata]
          Length = 426

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTNEQNIAESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF       +L  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|113120261|gb|ABI30270.1| ATPase beta subunit [Harpanthus scutatus]
          Length = 452

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 167/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + +  G  V   G    +       GR    LG
Sbjct: 16  GQEINVTCEVQQLLGNNKVRAVAMSATDGLIRGMEVIDTGAPLSVPVGEATLGRSFTVLG 75

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 76  EPVDNLGPVDAS-TTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 134

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 135 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 194

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF     E++   G +P 
Sbjct: 195 VYGQMNEPPGARMRVGLTALTMAEYFXDINKQDVLLFIDNIFRFVQVGSEVSALLGRMPS 254

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 255 AVGYQPTLSTEMGTLHERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 312

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 313 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 372

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 373 LSEED-RLTVARARKIERFLSQP 394


>gi|300853451|ref|YP_003778435.1| F1Fo ATPase subunit beta [Clostridium ljungdahlii DSM 13528]
 gi|300433566|gb|ADK13333.1| F1Fo ATPase, subunit beta [Clostridium ljungdahlii DSM 13528]
          Length = 464

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +   ++ +  + + +  +  +   + +V   +  D+V    +   + +
Sbjct: 5   GKVVQVIGPVVDIKFDTENLPNIYNAIDIKSGDKKIITEVAQHLGDDVVRTISMESTDGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+PID +  + K +    I  + P   ++  
Sbjct: 65  MRGMDAEDTGSPISVPVGEPVLGRLFNMLGQPIDENGEV-KAEQYYPIHRQAPSFEDQSV 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VGE
Sbjct: 124 KPEMFETGIKVIDLLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGE 183

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      +KK+ +V    +E P  R    LT +T+AEYF  KG +VLL +
Sbjct: 184 RTREGNDLYYEMQESGVIKKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFI 243

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V 
Sbjct: 244 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVP 301

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS++E G YP VDPLAS SR+ D      D  K+ S 
Sbjct: 302 ADDLTDPAPSTTFTHLDATTVLSRSISEIGIYPAVDPLASTSRILDPRIVGEDHYKVASD 361

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + H++ R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 VKHILERYSELQDIIAILGVDELSEDD-RLVVIRARRIQRFLSQP 405


>gi|210617049|ref|ZP_03291384.1| hypothetical protein CLONEX_03606 [Clostridium nexile DSM 1787]
 gi|210149572|gb|EEA80581.1| hypothetical protein CLONEX_03606 [Clostridium nexile DSM 1787]
          Length = 463

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/406 (27%), Positives = 188/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V   +  +  + D +         + +V   I  + V    +   E +
Sbjct: 4   GKIVQVMGPVVDVEFENNDIPYIKDALEVDNNGKRCVMEVAQHIGNNTVRCIMLNASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S    V   G   ++       GR+ N LG  IDG +SL + +    I    P    +  
Sbjct: 64  SRDMEVTATGSGIKVPVGDKTLGRLFNVLGDTIDGGESL-ENEEHWVIHRDAPTFEEQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255
           R RE  +   +     +  K+ +V    +E P  R     T +T+AEYF   +  NVLL 
Sbjct: 183 RSREGNDLWSEMKESGVLDKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDEQHQNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLANEVGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEADVVGEEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ +++E +DI  I G     +      V++   +  FL Q 
Sbjct: 361 NVQAILQKYKELQDIISILGMEELSEED-KTTVYRARKVQRFLSQP 405


>gi|28625015|emb|CAD56146.1| F1F0-ATPase subunit beta [Pediococcus parvulus]
          Length = 470

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 181/379 (47%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           V +   S  + +V + +   +V    +   + +  G  V   G    +       GRV N
Sbjct: 33  VKKPDGSILVAEVALELGDGVVRTIAMDGTDGLQRGLEVEDTGSSITVPVGDKTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+ ID  +  G       I    P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGETIDNGEKFGPEVKRNPIHRDPPKYDDLNPSMEILETGIKVIDLLAPYIRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+ L+     +   +   IS+   VGER RE  +   +     + +K+ +V   
Sbjct: 153 GGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLEKTAMVYGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            ++G YP VDPLAS S   D      +  K+ + + H++ R+ E +DI  I G     D 
Sbjct: 331 TQQGIYPAVDPLASTSSALDPSVVGEEHYKVATDVQHVLQRYRELQDIISILGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KTIVARARRIQFFLSQN 408


>gi|142561|gb|AAA82526.1| ATP synthase beta subunit [Bacillus megaterium]
          Length = 472

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 171/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            I +  + V    +   + +  G  V   G    +       GRV N LG+ ID D  + 
Sbjct: 51  AIHLGDNTVRTVAMSSTDGLVRGLEVEDTGAAISVPVGDVTLGRVFNVLGEKIDLDAPID 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G     I  + P   N     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 AGARRDPIHRQAPKFENLSTQAEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R+   L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARQRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 291 RI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 348

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   +   +   + R++E +DI  I G     D      V +   + 
Sbjct: 349 STSRALSPEIVGEEHYAIARQVQQTLQRYKELQDIIAILGMDELSDED-KLVVPRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQT 413


>gi|188991614|ref|YP_001903624.1| flagellum-specific ATP synthase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733374|emb|CAP51575.1| flagellum-specific ATP synthase [Xanthomonas campestris pv.
           campestris]
          Length = 458

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 144/412 (34%), Positives = 221/412 (53%), Gaps = 4/412 (0%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89
            +V  T+        +G     +        +V+  + +  Y+ P      +     V  
Sbjct: 45  RAVGLTLEATGCEAPMGATCKVEVDGGWVDAEVVGFSGERTYLMPSAELHGLLPNARVVP 104

Query: 90  WGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148
             R   +       GRVI++ G P+DG   + + + S+ +       + R+ +      G
Sbjct: 105 SRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RAEGSVGMAGVSINPLAREPITTSLDVG 163

Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-E 207
           +R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+  
Sbjct: 164 VRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVET 223

Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
               + L+++VVV A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + R
Sbjct: 224 TLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQR 283

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           EI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD+
Sbjct: 284 EIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADA 343

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +  +  L  L+  +   R
Sbjct: 344 ARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWRLRIRKLKRLLSAYTANR 403

Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVFQEITKKLQ 438
           D+  IG Y+ G D   D+A+ + P I DFL Q     S   D    + + ++
Sbjct: 404 DLIAIGAYQRGSDPATDEALARWPEIVDFLGQDVHKASDLTDSLSALQRLVE 455


>gi|328775180|gb|AEB39985.1| ATP synthase F1 subunit alpha [Funaria hygrometrica]
          Length = 381

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 156/369 (42%), Gaps = 21/369 (5%)

Query: 8   LAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66
           L Q   +Y   L V + G + S+      V  L++ +  G+ V      S   G  + + 
Sbjct: 18  LEQRITNYYTKLQVDEIGRVVSVGDGIARVYGLNK-IQAGEMVEFA---SGVKGMALNLE 73

Query: 67  LDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
            + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +L   +  
Sbjct: 74  NENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKALLGRVVDALGVPIDGKGALSAAE-R 132

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      + 
Sbjct: 133 RRVEVKAPGIIARKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQ 192

Query: 186 CFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKM 233
                           +   +G++   V + ++        +  ++V AT+ +   L+ +
Sbjct: 193 KQINTQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYCIIVAATASDPAPLQFL 252

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +   + EYF   G + L+I D +++ + + R+++      P    +P  VF    RL
Sbjct: 253 APYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDVFYLHSRL 312

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER      +   G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 313 LERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYRGIRPAI 372

Query: 352 DPLASVSRL 360
           +   SVSR+
Sbjct: 373 NVGLSVSRV 381


>gi|254463886|ref|ZP_05077297.1| flagellum-specific ATP synthase [Rhodobacterales bacterium Y4I]
 gi|206684794|gb|EDZ45276.1| flagellum-specific ATP synthase [Rhodobacterales bacterium Y4I]
          Length = 442

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 159/418 (38%), Positives = 248/418 (59%), Gaps = 5/418 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59
           M+  L+ L +     S  L  Q G ++ I      ++ L+    +GD  V+ +G   +  
Sbjct: 1   MKAELQALTRQI--ASTRLATQMGRVTGIAGGEIEISGLASAARIGDRLVLRRGPGDELH 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V++I  + + + P    +  ++GD V        +PS  W GRVI+  G+P+DG   L
Sbjct: 59  GEVLKIKGNNISMLPDRAPDGAAIGDAVLLHPSPEFAPSDHWIGRVIDPFGEPLDGRPML 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
             G +  ++M+  P A  R+ + +   TG  +++   P+  GQR+G+FAGSG+GKS+LL+
Sbjct: 119 -PGSVPRDLMAAPPKAAGRRGMGERLPTGQALLNTILPIVRGQRVGLFAGSGVGKSSLLA 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+E  LG + ++++VVV ATSD+S ++R+     A
Sbjct: 178 KLAKAMEADVVVMALIGERGREVNHFVEQVLGPEGMRRAVVVAATSDQSALVRRRCAWAA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +T+AE+F  +G NVL + DS+TRFA + REI+  SGE P  RGYP SV   +  L ER G
Sbjct: 238 MTVAEHFRDQGKNVLFLADSVTRFAEAHREISAASGEAPALRGYPPSVTPLITGLCERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  + +G+ITAV SVLV G + ++PIAD +R +LDGHIVL+R +AE GR+P +D   SVS
Sbjct: 298 PGGEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLSREIAERGRFPAIDVSRSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           R    A +ADE   +  +   +  +E++  +   G Y  G D +LD+AV   P +  F
Sbjct: 358 RSLPAAATADENAAIQEVRKFLGAYEQSEVMIRAGLYAEGNDAVLDQAVKLWPELDAF 415


>gi|21244374|ref|NP_643956.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|294667261|ref|ZP_06732481.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325924759|ref|ZP_08186196.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans
           91-118]
 gi|81860488|sp|Q8PGG7|ATPB_XANAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|21110032|gb|AAM38492.1| ATP synthase beta chain [Xanthomonas axonopodis pv. citri str. 306]
 gi|292602933|gb|EFF46364.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325544851|gb|EGD16197.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans
           91-118]
          Length = 468

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +  G I  I      V      V      +        L    ++   +V    +G  + 
Sbjct: 1   MSQGKIVQIIGAVVDVEFPRNEVPKVYHALKVDGTEITLEVQQQLGDGVVRTIALGSTDG 60

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +    +  +  R   +   A   GR+++ LG+PID    +   D   EI    P   ++ 
Sbjct: 61  LKRNLVATNTERAISVPVGAGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQS 119

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + VG
Sbjct: 120 SSTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVG 179

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD----- 250
           ER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D     
Sbjct: 180 ERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKG 239

Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+
Sbjct: 240 KDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD  + L+R++A  G YP VDPL S SR  D      +
Sbjct: 298 IQAVYVPADDLTDPSPATTFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + +++E +DI  I G     +    ++V +   I  F  Q 
Sbjct: 358 HYDTAQRVQQTLQKYKELKDIIAILGMDELSEED-KQSVSRARKIERFFSQP 408


>gi|289549061|ref|YP_003474049.1| ATP synthase F1 subunit beta [Thermocrinis albus DSM 14484]
 gi|289182678|gb|ADC89922.1| ATP synthase F1, beta subunit [Thermocrinis albus DSM 14484]
          Length = 473

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 191/416 (45%), Gaps = 24/416 (5%)

Query: 24  GYISSITSVYYTVTCLS---QYVCLG-----DFVVHQGK--NSDNLGQV-IRINLDIVYI 72
           G I  +      V   S     V  G      FV  +G     D   +V   I    V  
Sbjct: 3   GRIVQVIGAVVDVEFDSKELPPVRHGLKTRRRFVDDRGNWTEDDLYFEVAQHIGEHRVRS 62

Query: 73  CPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +G  + +  G  V +  G  ++       GR+ N +G+PID    +   +    I   
Sbjct: 63  IALGPTDGLVRGQEVEYLGGPIKVPVGRATLGRIFNVVGQPIDEAGPVNAEEY-WPIFRD 121

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-- 189
            PP   +    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +       
Sbjct: 122 PPPLEEQSTKVEILETGIKVIDLLEPYVKGGKVGLFGGAGVGKTVLMQELIHNIAKFHKG 181

Query: 190 -VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             ++  VGER RE  +  ++     +   +V+V    +E P +R     T +T+AEYF  
Sbjct: 182 FSVVIGVGERTREGNDLWKEMKESGVLPYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRD 241

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VL+ +D+I RF  +  E++T  G LP A GY  ++ +++  + ERI  +  +KG+
Sbjct: 242 VEGQDVLVFIDNIFRFVQAGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGS 299

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAW 365
           +T++ +V V  D+  DP   SV + LD   VL+R LAE G YP +DPL S S+    +  
Sbjct: 300 LTSIQAVYVPADDITDPAPYSVFAHLDATTVLSRRLAELGIYPAIDPLESTSKYLAPEYV 359

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQS 420
             +       +  ++ R++E ++I  I G     +   DKA+ ++   I  FL Q 
Sbjct: 360 GEEHYNTAMEVKRILQRYKELQEIIAILGMEELSEE--DKAIVNRARRIQRFLAQP 413


>gi|150187358|emb|CAK30237.1| ATP synthase alpha subunit [Streptococcus peroris ATCC 700780]
          Length = 367

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 160/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ ++ +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGL-ENAMSGELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ LG+P+DG   +   + +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDSLIGRVVDPLGRPVDGLGPID-TNKTRPVEAPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+T+      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTTIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLGDGLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|122051531|gb|ABM65868.1| ATP synthase beta chain [Grammitis aff. holttumii Ranker & Klimas
           2175]
          Length = 415

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G D V       +       GR+ N LG
Sbjct: 16  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMDAVDTGAPLSVPVGETTLGRIFNVLG 75

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 76  EPVDNLGPVQSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 134

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 135 GVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 194

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 195 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 254

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 255 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 312

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 313 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 372

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 373 LSEED-RLTVARARKIERFLSQP 394


>gi|114216076|gb|ABI54649.1| ATPase alpha subunit [Calypogeia muelleriana]
          Length = 345

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 82/342 (23%), Positives = 147/342 (42%), Gaps = 16/342 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GD+V   G    +       GRV++ALG PIDG  +
Sbjct: 2   GMALNLENENVGIVIFGSDTAIKEGDIVKRTGSIVDVPVGKAMLGRVVDALGVPIDGKGA 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK---- 174
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK    
Sbjct: 62  LSAVE-RRRVEVKAPGIIARKSVHEPMQTGLKAVDSPVPIGRGQRELIIGDRQTGKTAIA 120

Query: 175 -STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDE 226
             T+L+    +            +   +G++   V + ++        + S++V AT+ +
Sbjct: 121 IDTILNQKQINAQGTSDSEKLYCVYVAIGQKRSTVAQLVKILSEAGALEYSIIVAATASD 180

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ + + R+++      P    +P  V
Sbjct: 181 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSVAYRQMSLLLRRPPGREAFPGDV 240

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    R LER      +   G++TA+  +     + +  I  +V SI DG I     L  
Sbjct: 241 FYLHSRSLERAAKMSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQIFSETELFY 300

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
            G  P ++   SVSR+   A     K++  SL   + ++ E 
Sbjct: 301 RGSRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREV 342


>gi|23503605|dbj|BAC20399.1| ATP synthase beta-subunit [Chloromonas insignis]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSIEPTDGLTRGIEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEAALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|158520620|ref|YP_001528490.1| F0F1 ATP synthase subunit beta [Desulfococcus oleovorans Hxd3]
 gi|254808147|sp|A8ZUA1|ATPB_DESOH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|158509446|gb|ABW66413.1| ATP synthase F1, beta subunit [Desulfococcus oleovorans Hxd3]
          Length = 467

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVT-------CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           G +  +      V         +   + + + V++   ++  +     +  ++V    + 
Sbjct: 6   GKVVQVMGPVVDVEFEPGKLPAILTALLITNTVINDEADNLVVEVAQHLGDNVVRTIAMD 65

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
           + + +  G  V   G    +   A   GRV+N +GKP+DG   + + + +M I    P  
Sbjct: 66  VTDGLVRGMPVKDTGAPITMPVGAASLGRVLNVVGKPVDGLGPVSR-EKTMPIHRPAPLF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +       +TGI+VID+  P   G ++G+F G+G+GK+ ++     +         + 
Sbjct: 125 TEQDTSVNVLETGIKVIDLLVPFPRGGKMGLFGGAGVGKTVIMMEMVNNIAMQHGGISVF 184

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   +     +  K+ ++     E P  R    L+A+T AEYF      
Sbjct: 185 AGVGERTREGNDLYHEMKDSGVLPKAALIYGQMTEPPGARARVALSALTCAEYFRDVEGQ 244

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL+ +D+I RF  +  E++   G +P A GY  ++  +L  L ERI  +  +KG+ITAV
Sbjct: 245 DVLIFIDNIFRFTQAGAEVSALLGRIPSAVGYQPTLAVDLGGLQERI--TSTDKGSITAV 302

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADE 369
             V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S SR+ D A    + 
Sbjct: 303 QCVYVPADDLTDPAPATTFAHLDGTVVLSRQIAELGIYPSVDPLDSTSRILDAAYIGEEH 362

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +   + +++E +DI  I G     D      V +   +  FL Q 
Sbjct: 363 YRVAREVQQTLQKYKELQDIIAILGMDELSDED-KVTVERARKLQRFLSQP 412


>gi|19033095|gb|AAL83532.1|AF408804_1 ATP synthase beta subunit [Entransia fimbriata]
 gi|61196974|gb|AAX39472.1| ATP synthase beta subunit [Entransia fimbriata]
          Length = 402

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNRVRAVSMSATDGLMRGMDVIDTGAPLSVPVGEATLGRIFNVLGEPVDNLGPVNNS- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           L+  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  LTAPIHRNSPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEKNIAESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +   +   +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYDIAQGVKETLQRYKELQDIIAILGLDELSEED-RLVVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|310764885|gb|ADP09835.1| Flagellum-specific ATP synthase [Erwinia sp. Ejp617]
          Length = 454

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 148/414 (35%), Positives = 236/414 (57%), Gaps = 15/414 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
            + G ++  T +      L   + +G   V + +  D +     +V+     ++Y+ P+ 
Sbjct: 26  RRYGRLTRATGLVMEAVGL--KLPIGAICVVERQTRDGIMPVESEVVGFKDQLLYLMPLE 83

Query: 77  IGEEISLGDLVFH------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
             + +  G  V+        G+ ++       GRV++A G+P+DG  +  K   +  + +
Sbjct: 84  HVDGVLPGARVYAPDGDNDEGK-QLPVGPQLLGRVLDAQGRPLDGRPAPLKTRCA-SLFT 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           +    ++R  ++     G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +
Sbjct: 142 QPINPLHRDPIKSVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARFTDADVI 201

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ L+GERGREV++FIE+ LG + ++++VV+ A +D SP+LR    + A  +AE F  +G
Sbjct: 202 VVGLIGERGREVKDFIENILGAEGIERAVVIAAPADVSPVLRMQGAVYATRLAEDFRDRG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            NVLLI+DS+TRFA + RE+A   GE P  +GYP SVF+ LP L+ER G      G+ITA
Sbjct: 262 MNVLLIMDSLTRFAMAQREVALAIGEPPATKGYPPSVFARLPALVERAGNGVAGGGSITA 321

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR   +     +
Sbjct: 322 FYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIPHAQ 381

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            + V S    +  ++   D+  +G Y  G D +LD+A+ + P +  FL+QS  +
Sbjct: 382 YRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDALLDRAIARYPQMESFLQQSIHE 435


>gi|154424915|emb|CAL18560.1| ATP synthase alpha subunit [Streptococcus equinus]
          Length = 355

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 151/351 (43%), Gaps = 10/351 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AFGMAQNLESNDVGIIILGDFSSIREGDEVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   + +   +  + +  P  M R+ V +  +TGI+ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDI-ETTATRPVETPAPGVMQRKSVSEPLQTGIKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E  
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE 354


>gi|34539367|gb|AAQ74567.1| F1-ATPase alpha subunit [Monochoria korsakowii]
          Length = 364

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/362 (24%), Positives = 151/362 (41%), Gaps = 19/362 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRVI+A G PID
Sbjct: 7   SGVKGIALNLENENVGIVVFGSDTTIKEGDLVKRTGSIVDVPAGKAMLGRVIDAXGVPID 66

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  ++R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 67  GRGALSDHE-RRRVEVKAPGIISRKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 125

Query: 175 -----STLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
                 T+L+    +            +   +G++   V + ++     N  + S++V A
Sbjct: 126 TAIAIDTILNQKQMNSRGVSSSETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAA 185

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +
Sbjct: 186 TASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 245

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G+ TA+  +     + +  I  +V  I DG I    
Sbjct: 246 PGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSET 305

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
            L   G  P ++   SVSR+   A     K++  S    + ++ E   +     +   +D
Sbjct: 306 ELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLD 362

Query: 401 LI 402
             
Sbjct: 363 AA 364


>gi|34539277|gb|AAQ74522.1| F1-ATPase alpha subunit [Dimerocostus argenteus]
          Length = 373

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 156/381 (40%), Gaps = 21/381 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFR 94
           V  L++ +  G+ V          G  + +  + V I   G    I  GDLV   G R  
Sbjct: 1   VYGLNE-IQAGEMVEFA---RGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGFRGD 56

Query: 95  ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
                   GRV++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  FPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREF 205
             P+  GQR  +      GK+ +      +               +   +G++   V + 
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQINSRGTSETLYCVYVAIGQKRSTVAQL 175

Query: 206 IEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264
           ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A 
Sbjct: 176 VQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAV 235

Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHND 322
           + R+++      P    +P  VF    RLLER      +   G+ TA+  +     + + 
Sbjct: 236 AYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSA 295

Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            I  +V  I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 296 YIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRAMKQVRGSSKLELAQ 355

Query: 383 FEETRDIRLIGGYRPGVDLIL 403
           + E   +     +   +D   
Sbjct: 356 YRE---VAAFAQFGSDLDAAT 373


>gi|326935486|ref|XP_003213801.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Meleagris
           gallopavo]
          Length = 441

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 171/368 (46%), Gaps = 17/368 (4%)

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124
             + V    +   E +  G  V   G   RI       GR++N +G+PID    +     
Sbjct: 17  RENTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQF 76

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +
Sbjct: 77  AA-IHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN 135

Query: 185 DCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMA 234
                    + + VGER RE  +   + +        D   K  +V    +E P  R   
Sbjct: 136 VAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARV 195

Query: 235 PLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  +
Sbjct: 196 ALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTM 255

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDP
Sbjct: 256 QERI--TTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDP 313

Query: 354 LASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D      +   +   +  ++  ++  +DI  I G     +      V +   
Sbjct: 314 LDSTSRIMDPNIVGPEHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARK 372

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 373 IQRFLSQP 380


>gi|315121815|ref|YP_004062304.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495217|gb|ADR51816.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 480

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/424 (25%), Positives = 192/424 (45%), Gaps = 23/424 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICP 74
           +K+     G I  I      V        +   +    K+S  + +V++ +    V    
Sbjct: 2   TKSEAQNIGKIQQIVGAVVDVVFTDSLPPILGSLETDNKDSRIVLEVVQHLGEKTVRCIA 61

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +S GD +   G+   +       GR++N +G+P+D   ++   +    I    P
Sbjct: 62  MGKTDGLSRGDSIIDTGKQITVPVGEATLGRIMNVIGEPVDDHGAILTSE-RRAIHQLAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +        TGI+VID+ +P   G +IG+F G+G+GK+ L+     +         
Sbjct: 121 SYTEQSTGSSILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 180

Query: 191 IISLVGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLT 237
           + + VGER RE  +   + +G  +              K  +V    +ESP  R    LT
Sbjct: 181 VFAGVGERTREGNDLYREMIGSKVNVDPSTNNGSAVGSKCSLVYGQMNESPGARARVALT 240

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
            +T+AE+F  +G +VL  +D+I RF  +  EI+   G +P A GY +++ SE+  L ERI
Sbjct: 241 GLTVAEHFRDQGQDVLFFIDNIFRFTQANSEISALLGRIPSAVGYQSTLASEMGELQERI 300

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R ++E+G YP VDPL S 
Sbjct: 301 --TTTLKGSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRKISEKGIYPAVDPLDSN 358

Query: 358 SRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           S + +      +   +   +  ++ R++  +DI  I G     +      V +   I  F
Sbjct: 359 SNILEVDTVGKEHYDVARRVQEILQRYKSLQDIIAILGMDELSEED-KLVVARARKIERF 417

Query: 417 LKQS 420
           + Q 
Sbjct: 418 MSQP 421


>gi|302747368|gb|ADL63165.1| Atp1 [Bursera sp. Qiu 94206]
          Length = 345

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 147/342 (42%), Gaps = 16/342 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 5   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPID 64

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 65  GRGALSDHE-RRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 123

Query: 175 STLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVA 222
           + +      +                 +   +G++   V + ++     N  + S++V A
Sbjct: 124 TAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAA 183

Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
           T+ +   L+ +AP +   + E+F   G + L+I D +++ A + R+++      P    +
Sbjct: 184 TASDPAPLQFLAPYSGCAMGEFFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAF 243

Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           P  VF    RLLER      +   G++TA+  +     + +  I  +V SI DG I L  
Sbjct: 244 PGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLET 303

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 304 ELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 345


>gi|300866628|ref|ZP_07111316.1| ATP synthase subunit beta [Oscillatoria sp. PCC 6506]
 gi|300335400|emb|CBN56476.1| ATP synthase subunit beta [Oscillatoria sp. PCC 6506]
          Length = 482

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYIC 73
              GYI+ I      V     +   + + +   GKN          +V ++  D  V   
Sbjct: 8   TNVGYITQIIGPVVDVKFPTGKLPQIYNALQISGKNQAGQDISITCEVQQLLGDSQVRTV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G   ++       GR+ N +G+P+D    +G  +  + I    
Sbjct: 68  SMLSTDGLVRGMEVADTGAPIQVPVGPATLGRIFNVIGEPVDNLGPVGASE-RLPIHRSA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P     +     F+TGI+VID+  P   G +IG+F G+G+GK+ ++     +       +
Sbjct: 127 PAFTELETKPSVFETGIKVIDLLAPYRRGGKIGLFGGAGVGKTVIMMELVNNIAKAHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +  ++ +             K  +V    +E P  R    L+A+ +
Sbjct: 187 SVFGGVGERTREGNDLYKEMIESGVINEEDRSKSKIALVYGQMNEPPGARMRVGLSALAM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVSKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDMGDLQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT+V +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 305 STKEGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTM 364

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
              A    D   +  ++   + R++E +DI  I G     +      V +   +  FL Q
Sbjct: 365 LQPAVVGEDHYAIARAVQATLQRYKELQDIIAILGLDELSEDD-RLTVARARKMERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|171319011|ref|ZP_02908138.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171095766|gb|EDT40719.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 459

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 148/422 (35%), Positives = 214/422 (50%), Gaps = 12/422 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQG--KNSDNLGQVIRINLDIVYICPVGIG 78
            + G +  +      V  +   + +G               G+V+ +  +   +  +G  
Sbjct: 33  RRYGRLVEVIGTQVKVAGVD--LRIGQLCELSRSDDGQRVFGEVVGLTREAALVTLLGDV 90

Query: 79  EEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
             + +  LV    G  R+       GRV++ LG+P+D    L          +  P  + 
Sbjct: 91  AGLGVSTLVQPCAGSHRVGVGGALLGRVLDGLGRPLDDGSPLPDDVEMRASAAASPRPLT 150

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-KVIISLVG 196
           R  +     TG+R ID       GQR+G+FA +G GKSTLL M AR    +   +I+L+G
Sbjct: 151 RPLIRSILPTGVRAIDGLLTTGRGQRVGIFAPAGTGKSTLLGMIARGVSHECVCVIALIG 210

Query: 197 ERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ERGREVREF++D    + LK +VVVVATSD   + R  A  TA TIAEYF   G  VLL+
Sbjct: 211 ERGREVREFLDDILTPEQLKNTVVVVATSDRPSMERIKAAYTATTIAEYFRDNGREVLLL 270

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
            DS+TRFA ++RE    +GE  V RGYP SVFS LP L+ER GP+    G ITA  +VL+
Sbjct: 271 FDSVTRFARALRETGLAAGEPAVRRGYPPSVFSALPGLVERAGPAAT--GTITAFYTVLL 328

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +    +DPI + +RS+LDGHIVL+  LA  G YP +D   SVSRL  +   +      + 
Sbjct: 329 EDAEMSDPIGEEIRSLLDGHIVLSPKLAGAGHYPAIDVRNSVSRLMSQLVDSAASTTATR 388

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
               + R+E+   +  +G Y  G D  LD A+     +  FLKQ   +      F +++ 
Sbjct: 389 CREWLARYEDAELLLQLGEYHEGGDPALDSAIAAHGDLVAFLKQRTDEHVR---FDDMSA 445

Query: 436 KL 437
           +L
Sbjct: 446 QL 447


>gi|150187216|emb|CAK30198.1| ATP synthase alpha subunit [Streptococcus constellatus subsp.
           pharyngis]
 gi|150187254|emb|CAK30207.1| ATP synthase alpha subunit [Streptococcus intermedius]
 gi|150187322|emb|CAK30227.1| ATP synthase alpha subunit [Streptococcus constellatus subsp.
           constellatus]
 gi|154424923|emb|CAL18564.1| ATP synthase alpha subunit [Streptococcus constellatus subsp.
           constellatus]
          Length = 367

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 162/375 (43%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ ++ +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGLDNAMS-GELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ LG+P+DG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVDPLGRPVDGLGEV-KTDKTRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLSDSLFNGGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|119350497|gb|ABL63199.1| AtpB [Geminella sp. SAG 20.84]
          Length = 390

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 3   VRAVSMSATDGLMRGMEVIDTGKPLTVPVGQATLGRIFNVLGEPVDNLGPVESKEG-LPI 61

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 62  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 121

Query: 189 KVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 122 HGGVSVFGGVGERTREGNDLYMEMKESKVINEENIGESKVALVYGQMNEPPGARMRVGLT 181

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ER
Sbjct: 182 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQER 241

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 242 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 299

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 300 TSTMLQPWIVGEEHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 358

Query: 416 FLKQS 420
           FL Q 
Sbjct: 359 FLSQP 363


>gi|4519344|dbj|BAA75587.1| ATP synthase beta-subunit [Chlamydomonas debaryana]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKALAVPVGKGTLGRIFNVLGEPVDNMGNVL-VEATLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYESAQTVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|157827763|ref|YP_001496827.1| F0F1 ATP synthase subunit beta [Rickettsia bellii OSU 85-389]
 gi|166201730|sp|A8GY40|ATPB_RICB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157803067|gb|ABV79790.1| F0F1 ATP synthase subunit beta [Rickettsia bellii OSU 85-389]
          Length = 473

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 113/435 (25%), Positives = 187/435 (42%), Gaps = 34/435 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M+KN+  + Q+              IS++  V +T       + L     +  K    L 
Sbjct: 1   MKKNIGKITQI--------------ISAVVDVKFTNKGKLPQI-LNALECYNDKQRIVLE 45

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
               I  D V    +   E +  G  V   G    I       GR++N +G+PIDG   +
Sbjct: 46  IAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKI 105

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
               +S  I    P    +        TGI+V+D+  P   G +IG+F G+G+GK+ L+ 
Sbjct: 106 KGSSIS-SIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIM 164

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESP 228
               +         + + VGER RE  +   + +             K  +V    +E P
Sbjct: 165 ELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLEEPEKSKVALVYGQMNEPP 224

Query: 229 ILRKMAPLTAVTIAE--YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             R    LT +T+AE     ++G +VL  +D+I RF  +  E++   G +P A GY  ++
Sbjct: 225 GARARVALTGLTVAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 284

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +++  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD  IVL+R +AE G
Sbjct: 285 ATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATSFAHLDATIVLSRQIAELG 342

Query: 347 RYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPL S S++ D      +   +   +  ++  ++  +DI  I G     +     
Sbjct: 343 IYPAVDPLDSTSQVLDPMIVGEEHYNVARKVQQILQTYKSLQDIIAILGMDELSEED-KL 401

Query: 406 AVHQVPIIYDFLKQS 420
            V +   I  FL Q 
Sbjct: 402 TVSRARKIQRFLSQP 416


>gi|6017820|gb|AAF01644.1| ATP synthase beta subunit [Peperomia serpens]
          Length = 478

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 181/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + +    +G+++     +   +V ++  +  V    + 
Sbjct: 1   GRIAQIIGPVLXVAFPPGKMPNIYNAXXVKGQDTVXQQINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 61  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+ EY
Sbjct: 180 GGVGERTREGNDLYIEMKDSGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMXEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSSMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|330850821|ref|YP_004376571.1| ATP synthase CF1 beta chain [Fistulifera sp. JPCC DA0580]
 gi|328835641|dbj|BAK18937.1| ATP synthase CF1 beta chain [Fistulifera sp. JPCC DA0580]
          Length = 475

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 185/414 (44%), Gaps = 21/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEE 80
           GY+S I      +T     +        +     S+ + +V ++  D  V    +   + 
Sbjct: 9   GYVSQIIGPVLDITFTEGNLPPIYSAVKIVLEDGSETIVEVQQLLGDNKVRAVSMRSTDG 68

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR+ N +G+P+D    +   D ++ I    P     +
Sbjct: 69  LRRGAEAIDLGTPISVPVGTPTLGRIFNVIGEPVDEQGEVSF-DETLPIHRDAPAFTELE 127

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 128 TKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 187

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +  E+               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 188 ERTREGNDLYEEMKESGVINSKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 247

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+I
Sbjct: 248 NKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSI 305

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +      S
Sbjct: 306 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPDIVS 365

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++  S+   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 EEHYRIAESVKETLQRYKELQDIIAILGIDELSEED-RLTVARARKVERFLSQP 418


>gi|316974140|gb|EFV57666.1| ATP synthase F1, beta subunit [Trichinella spiralis]
          Length = 542

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/431 (23%), Positives = 178/431 (41%), Gaps = 29/431 (6%)

Query: 10  QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLD 68
           Q A   +       G I+++      V        + + +  Q      + +V   +  +
Sbjct: 60  QGATSAAPKSKSAVGRITAVIGAVVDVHFEEGLPPILNALEVQDHKPRLVLEVAQHLGEN 119

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG----- 122
           +V    +   E +  G  V   G   +I       GR++N +G+PID    +        
Sbjct: 120 VVRTIAMDGTEGLVRGQEVVDSGSPIKIPVGPGTLGRIMNVIGEPIDERGPITTTSFVGR 179

Query: 123 --DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 180 TMTKFASIHQDAPEFVEMSVAQEILTTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIME 239

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPIL 230
              +         + + VGER RE  +   + +         +  K  +V    +E P  
Sbjct: 240 LINNVAKAHGGYSVFAGVGERTREGNDLYNEMIETKVIDLKGDTSKVALVYGQMNEPPGA 299

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
           R    LT +T+AEYF        +    +  F  +  E++   G +P A GY  ++ +++
Sbjct: 300 RARVALTGLTVAEYFRD------VEGQDVLLFTQAGSEVSALLGRIPSAVGYQPTLATDM 353

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP 
Sbjct: 354 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPA 411

Query: 351 VDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+ D     +    +   +  ++  ++  +DI  I G     +      V +
Sbjct: 412 VDPLDSTSRIMDPNIVGERHYNVARGVQKILQNYKSLQDIIAILGMDELSEDD-KLTVSR 470

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 471 ARKIERFLSQP 481


>gi|149384699|gb|ABR25158.1| ATP synthase beta chain [Lepisorus longifolius]
          Length = 426

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMSAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|63253187|dbj|BAD98364.1| beta subunit of ATP synthesis [Davallia divaricata]
 gi|63253203|dbj|BAD98376.1| beta subunit of ATP synthesis [Davallia formosana]
          Length = 464

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 185/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S+ +    GYI+ I      V +   +   + + +V +G+N      D   +V ++  + 
Sbjct: 11  SELVEKNVGYITQIIGPVLDVASSPGEMPNIYNSLVVRGQNPAGQQIDVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    +  G  +  
Sbjct: 71  EVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPVQSG-TTFP 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     +   
Sbjct: 130 IHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R     
Sbjct: 190 AHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGS 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPLD 367

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   + 
Sbjct: 368 STSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKVE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|19033073|gb|AAL83521.1|AF408793_1 ATP synthase beta subunit [Chaetosphaeridium ovalis]
          Length = 402

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRGMDVIDTGSALSVPVGEVTLGRIFNVLGEPVDDMGPVNAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLGESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLLVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|4519290|dbj|BAA75560.1| ATP synthase beta-subunit [Eudorina unicocca]
 gi|4519292|dbj|BAA75561.1| ATP synthase beta-subunit [Eudorina unicocca]
 gi|14020801|dbj|BAB47545.1| ATP synthase beta-subunit [Eudorina unicocca]
          Length = 376

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|86147154|ref|ZP_01065470.1| ATP synthase subunit B [Vibrio sp. MED222]
 gi|218711023|ref|YP_002418644.1| F0F1 ATP synthase subunit beta [Vibrio splendidus LGP32]
 gi|85835038|gb|EAQ53180.1| ATP synthase subunit B [Vibrio sp. MED222]
 gi|218324042|emb|CAV20404.1| ATP synthase beta chain [Vibrio splendidus LGP32]
          Length = 467

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 112/440 (25%), Positives = 186/440 (42%), Gaps = 26/440 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQGEVPRVYDALNVNEVKERLVLEVQQQLGGGVVRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  +    I  + P    
Sbjct: 61  DGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-HYAIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKAGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS----- 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q      
Sbjct: 358 GQEHYDIARGVQSTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIEKFLTQPYHVAE 416

Query: 421 --PSDLSSEDVFQEITKKLQ 438
               D       +E  +  Q
Sbjct: 417 VFTGDPGVYVPLKETLRGFQ 436


>gi|308071147|ref|YP_003872752.1| ATP synthase subunit beta [Paenibacillus polymyxa E681]
 gi|305860426|gb|ADM72214.1| ATP synthase beta chain [Paenibacillus polymyxa E681]
          Length = 466

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/363 (26%), Positives = 167/363 (46%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GRV N LG PID    + +  
Sbjct: 52  LGDNRVRCIAMSSTDGLVRGAEAIDLGAPISVPVGEATLGRVFNVLGTPIDNGADMSET- 110

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I  + P         +  +TGI+VID+  P   G ++G+F G+G+GK+  +     
Sbjct: 111 ARNPIHRQAPSFDELTTQAEMLETGIKVIDLLAPYAKGGKVGLFGGAGVGKTVTIQELIN 170

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +   +     + + VGER RE  +   +      + K+ +V    +E P  R    LT +
Sbjct: 171 NIAQEHGGISVFAGVGERTREGNDLYHEMRDSGVINKTAMVFGQMNEPPGARLRVALTGL 230

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI 
Sbjct: 231 TMAEYFRDQEGRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI- 289

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG++T++ ++ V  D++ DP   +  + LD    L R ++E G YP VDPLAS S
Sbjct: 290 -TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKISEMGIYPAVDPLASSS 348

Query: 359 RLA-DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+        +   +   +  ++ R+ E +DI  I G     +      V +   I  FL
Sbjct: 349 RILAPDVVGEEHYNVAQGVKQILARYNELQDIIAILGMDELSEED-KMLVARARKIQRFL 407

Query: 418 KQS 420
            Q 
Sbjct: 408 SQP 410


>gi|66821917|gb|AAY57286.1| ATPase alpha subunit [Trimenia moorei]
          Length = 356

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 84/360 (23%), Positives = 151/360 (41%), Gaps = 19/360 (5%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V I   G    I  GDLV   G    +P      GRV++ALG PIDG  +L   +   
Sbjct: 1   ENVGIVVFGSDTAIKEGDLVKRTGSIVDAPAGKAMLGRVVDALGVPIDGRGALSDHE-RR 59

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +  
Sbjct: 60  RVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQK 119

Query: 187 FD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
                          +   +G++   V + ++     N  + S++V AT+ +   L+ +A
Sbjct: 120 QMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFIA 179

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLL
Sbjct: 180 PYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLL 239

Query: 295 ERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           ER      +   G+ TA+  +     + +  I  +V  I DG I L   L   G  P ++
Sbjct: 240 ERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQIRLETELFYRGIRPAIN 299

Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
             +SVSR+   A     K++  S    + ++ E   +  +  +   +D       ++   
Sbjct: 300 VGSSVSRVGSAAQLKAMKQVRGSSKLELAQYRE---VAALAQFGSDLDAATQALPNRGAR 356


>gi|299753037|ref|XP_001833020.2| ATP synthase subunit beta [Coprinopsis cinerea okayama7#130]
 gi|298410114|gb|EAU88709.2| ATP synthase subunit beta [Coprinopsis cinerea okayama7#130]
          Length = 483

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 173/349 (49%), Gaps = 15/349 (4%)

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           +G +V       +       GR+IN +G+PID    + KG+  + I +  P  +++    
Sbjct: 77  IGAVVDTGAPIMVPVGKGTLGRIINVIGEPIDERGPI-KGEKMLPIHADPPAFVDQSTTA 135

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERG 199
           +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         I   VGER 
Sbjct: 136 EVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGFSIFCGVGERT 195

Query: 200 REVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           RE  +   + +       +   K  +V    +E P  R    LT +TIAEYF  +   +V
Sbjct: 196 REGNDLYHEMIETGVIQLEGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDV 255

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V +
Sbjct: 256 LLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGAMQERI--TTTKKGSITSVQA 313

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           V V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D      +  +
Sbjct: 314 VYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRMLDPRIVGQEHYE 373

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + +++  ++  ++  +DI  I G     +      V +   I  F+ Q 
Sbjct: 374 VATAVQKILQDYKSLQDIIAILGMDELSEED-KLTVERARKIQRFMSQP 421


>gi|149384373|gb|ABR25009.1| ATP synthase beta chain [Anemia adiantifolia]
          Length = 426

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 160/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMSVTDTGAPLSVPVGEITLGRIFNVLGEPVDDLGPVDSSA 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   I    P           F+TGI+V+D+  P   G +IG F G+G+GK+  +     
Sbjct: 61  M-FPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVPIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQDVSESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEY       +VLL +D+I RF  +  E+    G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQAGSEVPALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT+  +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSTQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDESSEED-RLTVSRA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|197120311|ref|YP_002140738.1| F0F1 ATP synthase subunit beta [Geobacter bemidjiensis Bem]
 gi|322421875|ref|YP_004201098.1| ATP synthase F1 subunit beta [Geobacter sp. M18]
 gi|226740204|sp|B5EFI7|ATPB_GEOBB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|197089671|gb|ACH40942.1| ATP synthase F1, beta subunit [Geobacter bemidjiensis Bem]
 gi|320128262|gb|ADW15822.1| ATP synthase F1, beta subunit [Geobacter sp. M18]
          Length = 470

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 18/416 (4%)

Query: 19  LVVQGGYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVY 71
           +    G IS +      V         +     V +   +      V+     +  + V 
Sbjct: 1   MSQNFGKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G  V   G+   +       GR++N +G+P+D    +G  +    I  
Sbjct: 61  TIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIG-NEKEYGIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  +N+    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 120 EAPLFVNQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHG 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +     +  K+ +V    +E P  R    L+A++IAEYF 
Sbjct: 180 GFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFR 239

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG
Sbjct: 240 DEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTNKG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 298 SITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 358 IGDEHYAIARQVQYVLQKYKDLQDIIAILGMDELSEED-KLVVARARKIQKFLSQP 412


>gi|42558326|gb|AAS19872.1| ATP synthase beta chain [Ctenopteris lasiostipes]
          Length = 422

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|150187350|emb|CAK30234.1| ATP synthase alpha subunit [Streptococcus phocae]
          Length = 367

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 155/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AYGMAQNLESNDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N+LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNSLGQPVDGLGDIATTGFR-PVEAPAPGVMQRKSVFEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNLK-KSV 218
           QR  +      GK+T+      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTTVAIDTILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGAMDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQESLFNSGIRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|119350493|gb|ABL63197.1| AtpB [Geminella minor]
          Length = 389

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 2   VRAVSMSATDGLMRGMEVIDTGKPLTVPVGQATLGRIFNVLGEPVDNLGPVESKEG-LPI 60

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 61  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 120

Query: 189 KVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 121 HGGVSVFGGVGERTREGNDLYMEMKESKVINEENIGESKVALVYGQMNEPPGARMRVGLT 180

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ER
Sbjct: 181 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQER 240

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 241 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 298

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 299 TSTMLQPWIVGEEHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 357

Query: 416 FLKQS 420
           FL Q 
Sbjct: 358 FLSQP 362


>gi|148787943|gb|ABR12221.1| ATP synthase beta subunit [Anigozanthos flavidus]
          Length = 424

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGCLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +     R++E +DI  I G     +      V +   +
Sbjct: 299 DSTSTMLQPRIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKM 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|52082896|gb|AAU26028.1| ATPase beta subunit [Peperomia serpens]
          Length = 466

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I  I      V     +   + + ++ +G+++     +   +V ++  +  V    + 
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALIVKGQDTVDQQINVTCEVQQLLGNNRVRAVAMS 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 61  ATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAPAF 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 120 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 179

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 180 GGVGERTREGNDLFIEMKDSGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 239

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 240 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 297

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 298 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSSMLQP 357

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|17224733|gb|AAL37088.1| ATP synthase beta subunit [Dioscorea arachidna]
          Length = 478

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKN-----SDNLGQVIRINLDI-VYICPVG 76
           G I  I   V   +    +   + + +V +G+      +D   +V ++  +  V    + 
Sbjct: 9   GRIVQIIGPVLDVIFPPGKMPNIYNALVVKGRAXXQQINDVTCEVQQLLGNNRVRAVAMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 69  ATDGLMRGMGVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F  +G+GK+ L+     +       +S+ 
Sbjct: 128 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGEAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYIEMKESGVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 248 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 365

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 GIVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|86156234|gb|ABC86835.1| ATP synthase beta subunit [Pinctada fucata]
          Length = 523

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/411 (25%), Positives = 187/411 (45%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + S+      V        + + +  + +    + +V   +  + V    +   E + 
Sbjct: 56  GKVVSVIGAVVDVQFEDSLPPILNALEVKNRKPRLILEVAQHLGENTVRTIAMDGTEGVV 115

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G      G   RI       GR+IN +G+PID    + + D  + I ++ P  +     
Sbjct: 116 RGMECIDSGFPIRIPVGPATLGRIINVIGEPIDERGPV-QTDKLLPIHAEAPEFVEMSVE 174

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 175 QEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 234

Query: 199 GREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +        D+  K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 235 TREGNDLYHEMITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 294

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 295 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 352

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DE 369
            ++ V  D+  DP   +  + LD   VL+R ++E G YP V PL S SR+ D      + 
Sbjct: 353 QAIYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVGPLDSTSRILDPNVVGQEH 412

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +  ++  F   +DI  I G     +      V +   I  FL Q 
Sbjct: 413 YRVARGVQKILQDFRSLQDIIAILGMDELSEED-KLTVTRARKIQRFLSQP 462


>gi|311033322|ref|ZP_07711412.1| F0F1 ATP synthase subunit beta [Bacillus sp. m3-13]
          Length = 472

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  + V    +   + +  G  V   G    +       GRV N LG+ ID D  + 
Sbjct: 50  ALHLGDNTVRTIAMASTDGVVRGMEVEDAGHPISVPVGDVTLGRVFNVLGENIDLDAPIA 109

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
            G     I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 110 AGSRRDPIHRQAPTFDQLSTDVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 169

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      +KK+ +V    +E P  R    L
Sbjct: 170 LINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKTAMVFGQMNEPPGARMRVAL 229

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 230 TGLTMAEYFRDDQGQDVLFFMDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 289

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLA
Sbjct: 290 RI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLA 347

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    D   +   +   + R++E +DI  I G     D      VH+   I 
Sbjct: 348 STSRALAPEVVGDDHYAVAREVQVTLQRYKELQDIIAILGMDELTDED-KLTVHRARRIQ 406

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 407 FFLSQN 412


>gi|116490723|ref|YP_810267.1| F0F1 ATP synthase subunit beta [Oenococcus oeni PSU-1]
 gi|116091448|gb|ABJ56602.1| ATP synthase F1 subcomplex beta subunit [Oenococcus oeni PSU-1]
          Length = 504

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 10/365 (2%)

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           I +   +V    +   + ++ G  V   G    +       GRV N LG+P+DG D +  
Sbjct: 85  IDLGDSVVRTIAMDSTDGLTRGMKVLDTGAPIEVPVGEATLGRVFNVLGEPVDGGDPIPN 144

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 I    P         +  +TGI+VID+  P   G + G+F G+G+GK+ L+   
Sbjct: 145 SVDRHPIHRSAPKYDELATSTEVLETGIKVIDLLEPYLRGGKTGLFGGAGVGKTVLIQEL 204

Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
             +       IS+   VGER RE  +   +     + K + +V    +E P  R    LT
Sbjct: 205 IHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLKNTAMVYGQMNEPPGARMRVGLT 264

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AE F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ER
Sbjct: 265 GLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQER 324

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL ++G YP VDPL S
Sbjct: 325 I--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLES 382

Query: 357 V-SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             S L       D  ++ + + H + R++E +DI  I G     D      V++   I  
Sbjct: 383 TSSALTPDIVGEDHYEVATQVQHFLQRYKELQDIISILGMDELSDEE-KTIVNRARRIQF 441

Query: 416 FLKQS 420
           FL Q 
Sbjct: 442 FLSQP 446


>gi|21633387|gb|AAM52168.1| ATP synthase beta subunit [Petrogenia repens]
          Length = 475

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 178/413 (43%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEEI 81
           G I  I      V     +   + + +V QG+ ++   +V ++  +  V    +   + +
Sbjct: 9   GRIVQIMGPVLDVAFPPGKMPNIYNALVVQGRETNVTCEVQQLLGNNRVRAVAMNDTDGL 68

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           + G  V   G    +       GR+ N LG+P               I    P  +    
Sbjct: 69  TRGMEVIDTGVPISVPVGGSTLGRIFNVLGEPX-XXXXXXXXXXXXPIHRSAPAFIQLDP 127

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---E 197
               F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   E
Sbjct: 128 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGE 187

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           R RE  +   +               K  +V    +E P  R    LTA+T+AEYF    
Sbjct: 188 RTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVN 247

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT
Sbjct: 248 EQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSIT 305

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           ++ +V V  D+  DP   +    LD   VL+R LA +G YP VDPL S S +        
Sbjct: 306 SIQAVYVPADDLTDPAPATTFVHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGE 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 EHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 417


>gi|313897004|ref|ZP_07830551.1| ATP synthase F1, beta subunit [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320529504|ref|ZP_08030589.1| ATP synthase F1, beta subunit [Selenomonas artemidis F0399]
 gi|312974451|gb|EFR39919.1| ATP synthase F1, beta subunit [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320138215|gb|EFW30112.1| ATP synthase F1, beta subunit [Selenomonas artemidis F0399]
          Length = 470

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/410 (26%), Positives = 188/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDN----LGQVIRINLDIV-YICPVGI 77
           G +  +      +   +  +  +   +   GK +D       +V++   D V     +  
Sbjct: 4   GKVVQVIGPVVDIEFPAGELPEILSAIKIDGKAADREIHLTVEVMQHLGDSVTRCIAMSS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G   ++       GRV N LG+ +D + +      S  I    P   
Sbjct: 64  TDGLMRGMAAEDTGSPIKVPVGEATLGRVFNVLGETVDHNPAPVGNTESWPIHRPAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           +++   +  +TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +     + +
Sbjct: 124 DQETSTQILETGIKVVDLIAPYSRGGKVGLFGGAGVGKTVLIMELIHNIATEHGGYSVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF      +
Sbjct: 184 GVGERTREGNDLWSEMTESGVIDKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V 
Sbjct: 244 VLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +  
Sbjct: 302 AVYVPADDLTDPAPAATFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 EVARGVQAVLQKYKELQDIIAILGMEELSDED-KLTVSRARKIQRFLSQP 410


>gi|148978361|ref|ZP_01814866.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
 gi|145962520|gb|EDK27798.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3]
          Length = 467

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 112/440 (25%), Positives = 187/440 (42%), Gaps = 26/440 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I  I      V      V  + D +         + +V + +   +V    +G  
Sbjct: 1   MATGKIVQIIGAVVDVEFPQGEVPRVYDALNVNEVKERLVLEVQQQLGGGVVRAIVMGSS 60

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V + G    +       GR++N LG  ID    +G  +    I  + P    
Sbjct: 61  DGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGEIGAEE-HYAIHREAPSYEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TG++VID+  P   G +IG+F G+G+GK+  +     +         + + 
Sbjct: 120 QSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
           VGER RE  +F  +               K  +V    +E P  R    LT +T+AE F 
Sbjct: 180 VGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
            +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  ++G+
Sbjct: 240 DEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +DPL S SR  D    
Sbjct: 298 ITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVV 357

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS----- 420
             +   +   +   + R++E +DI  I G     +    + V +   I  FL Q      
Sbjct: 358 GQEHYDIARGVQSTLQRYKELKDIIAILGMDELSEED-KQVVSRARKIEKFLTQPYHVAE 416

Query: 421 --PSDLSSEDVFQEITKKLQ 438
               D       +E  +  Q
Sbjct: 417 VFTGDPGVYVPLKETLRGFQ 436


>gi|60117188|ref|YP_209522.1| ATP synthase CF1 beta subunit [Huperzia lucidula]
 gi|75321504|sp|Q5SCV8|ATPB_HUPLU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|50659996|gb|AAT80718.1| ATP synthase CF1 beta subunit [Huperzia lucidula]
          Length = 492

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/426 (26%), Positives = 184/426 (43%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI 69
           S  +    GYI+ I      V     +   + +  + +GKN      +   +V ++  + 
Sbjct: 11  STLVEKNVGYITQIIGPVLDVAFPPGKMPNIYNSSIIKGKNPAGQEMNVTCEVQQLLGNN 70

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + ++    V   G    +       GR+ N LG+P+D   S+  G  S  
Sbjct: 71  KVRAVAMSATDGLTREMKVVDTGAPLSVPVGEATLGRIFNVLGEPVDNLGSVDAGTTS-P 129

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 130 IHRSAPAFAQSDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 189

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 190 AHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGL 249

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 250 TALTMAEYFRDVNKQDVLLFIDNILRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 309

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP  
Sbjct: 310 RI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPSD 367

Query: 356 SVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S   +       +   +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 368 STPTMLQPWIVGEQHYETAQEVKQTLQRYKELQDIIAILGLDESSEED-RLTVARARKIE 426

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 427 RFLSQP 432


>gi|195953395|ref|YP_002121685.1| F0F1 ATP synthase subunit beta [Hydrogenobaculum sp. Y04AAS1]
 gi|195933007|gb|ACG57707.1| ATP synthase F1, beta subunit [Hydrogenobaculum sp. Y04AAS1]
          Length = 470

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 111/415 (26%), Positives = 188/415 (45%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTVTCLS---QYVCLGDFV--VHQGKNSDNLGQVIRIN------LDIVYI 72
           G +  +      V   +     +  G  +     G N + L + + +          V  
Sbjct: 4   GKVVQVIGAVLDVEFDTEELPPIRHGLVMDRRFMGDNDEWLTEKLYLEVAQHIGEKRVRA 63

Query: 73  CPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +G  + I  G  V +  G  ++       GRV N +G+PID    +   D    +   
Sbjct: 64  IAMGPTDGIQRGAKVQYFGGPIKVPVGDGVLGRVFNVVGQPIDEAGDVKATD-HWPMFRD 122

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK-- 189
            PP   +    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +       
Sbjct: 123 PPPLTEQSTKVEILETGIKVIDLLEPYVKGGKVGLFGGAGVGKTVLMQELIHNIAKFHKG 182

Query: 190 -VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             ++  VGER RE  +   +     +   +V+V    +E P +R     T +T+AEYF  
Sbjct: 183 YSVVIGVGERTREGNDLWHEMKDSGVLPYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRD 242

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VL  +D+I RF  +  E++T  G LP A GY  ++ +++  + ERI  +  +KG+
Sbjct: 243 IQGQDVLTFIDNIFRFVQAGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGS 300

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-DKAW 365
           IT+V +V V  D+  DP   S+ + LD   VL R L E G YP +DPL S S+    +  
Sbjct: 301 ITSVQAVYVPADDITDPAPYSIFAHLDATTVLARRLTELGIYPAIDPLESTSKYLAPEFV 360

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQ 419
             +   +   +  ++ R++E ++I  I G     D   DKA+ ++   I  FL Q
Sbjct: 361 GQEHYSVAMEVKRILQRYKELQEIIAILGMEELSDE--DKAIVNRARRIQKFLSQ 413


>gi|119350531|gb|ABL63216.1| AtpB [Planctonema sp. M110-1]
          Length = 393

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 165/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +G  + S+ I
Sbjct: 5   VRAVSMSATDGLMRGMEVIDTGNPLTVPVGQATLGRIFNVLGEPVDNLGPVGNKE-SLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        D       +   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEDHYNCAQLVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|302747546|gb|ADL63254.1| Atp1 [Myodocarpus involucratus]
          Length = 349

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|294013066|ref|YP_003546526.1| flagellum-specific ATP synthase FliI [Sphingobium japonicum UT26S]
 gi|292676396|dbj|BAI97914.1| flagellum-specific ATP synthase FliI [Sphingobium japonicum UT26S]
          Length = 442

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 140/410 (34%), Positives = 216/410 (52%), Gaps = 3/410 (0%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G + S  +    VT   + +  G  ++     +    +V+    D   + P+     
Sbjct: 24  RHVGRLVSHDAGMLEVTGFRRPIGAGARLIA-SDGTICRAEVVGFRGDRTLLVPLDADAP 82

Query: 81  ISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V        +       GRVI+A+G+P+D    +  G  S  +       ++R 
Sbjct: 83  LENGARVEPDSQATMVQVGEGLIGRVIDAMGQPLDRKGPIIAG-GSWPLNGVKGNVLDRG 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           RV + F  G+R ++       GQRI + AGSG+GKS L+    +    D V+  L+GERG
Sbjct: 142 RVTEPFDLGVRAVNALLTAGRGQRIAIIAGSGVGKSVLMGQMIQGAEADIVVAGLIGERG 201

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV +F+E  L   + KS+VV   +D  P+LR  A   A  IAEYF ++G  VLL++DS+
Sbjct: 202 REVSDFLETKLKGAMHKSIVVAVPADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSL 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR AH+ REI    GE P  +GYP S  + +PRL+ER G   +  G+ITA+ +VL DGD+
Sbjct: 262 TRCAHAQREIGLALGEPPAMKGYPPSALALIPRLVERAGVDARSGGSITALYTVLADGDD 321

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPI D+ R+I+DGH VL+R L+E+  +P +D   S+SR+       + +   ++   L
Sbjct: 322 TDDPIVDAARAIVDGHFVLSRHLSEQAIFPAIDVGKSLSRVMADVVPDEHRMAAAAYRRL 381

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
              +EE RD+ L+G YRPG D ++D+AV +   I DF++Q        D 
Sbjct: 382 WAAYEENRDLILMGAYRPGNDPVIDEAVQRRQEILDFIRQDQKSFIDLDT 431


>gi|85374584|ref|YP_458646.1| F0F1 ATP synthase subunit beta [Erythrobacter litoralis HTCC2594]
 gi|123005015|sp|Q2N8Z2|ATPB_ERYLH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|84787667|gb|ABC63849.1| ATP synthase beta subunit [Erythrobacter litoralis HTCC2594]
          Length = 485

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/420 (24%), Positives = 188/420 (44%), Gaps = 24/420 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G IS +      V    +   +   +  +  ++  + +V   +  + V    +   +
Sbjct: 10  TTNGTISQVIGAVVDVQFPGELPAILTALETENGDTTLVLEVAQHLGENTVRTIAMDGTD 69

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G +  +       GR++N +G+PID    +G  D +  I ++ P  +++
Sbjct: 70  GLVRGQEVINTGAQISVPVGPKTLGRIMNVVGEPIDMRGPVG-ADKANPIHAEAPAFVDQ 128

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
                   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 129 STDAAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGV 188

Query: 196 GERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIA 242
           GER RE  +   ++L   +              K  +V    +E P  R    L+ +T+A
Sbjct: 189 GERTREGNDLYHEFLDAGVIAKNEAGEAISEGSKVALVFGQMNEPPGARARVALSGLTMA 248

Query: 243 EYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 249 EYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGNLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             KG+IT+V ++ V  D+  DP   +  + LD    LNR+++E G YP VDPL S SR+ 
Sbjct: 307 TTKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVL 366

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      +  +    +   + +++  +DI  I G     +      V +   I  FL Q 
Sbjct: 367 EPRVVGQEHYETARKVQETLQKYKSLQDIIAILGMDELSEED-KLTVARARKIQKFLSQP 425


>gi|302747662|gb|ADL63312.1| Atp1 [Swietenia macrophylla]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + E+F   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEFFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +       +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGAVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|302747518|gb|ADL63240.1| Atp1 [Limeum africanum]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKELNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|149384685|gb|ABR25151.1| ATP synthase beta chain [Belvisia spicata]
          Length = 426

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMSAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|114328720|ref|YP_745877.1| F0F1 ATP synthase subunit beta [Granulibacter bethesdensis CGDNIH1]
 gi|122326328|sp|Q0BQE8|ATPB_GRABC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|114316894|gb|ABI62954.1| ATP synthase beta chain [Granulibacter bethesdensis CGDNIH1]
          Length = 476

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 184/414 (44%), Gaps = 21/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ I      V    +   + + +  +  +   + +V   +    V    +   + + 
Sbjct: 7   GRVTQILGAVVDVQFDGELPFIQNALQTRIGDRTLILEVAQELGERTVRAIAMDSTDGLV 66

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   GR   +       GR++N +G+PID    +     +  I  + P    +   
Sbjct: 67  RGAEVEDLGRPITVPVGPGTLGRILNVIGEPIDERGPVD-AKKTYSIHREAPSFEEQAAS 125

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 126 AEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGER 185

Query: 199 GREVREFIEDYLGDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
            RE  +   + +   +           K  +V    +E P  R    L+ ++IAEYF  +
Sbjct: 186 TREGNDLYHEMIDAGVIKLGENTTEGSKVALVYGQMNEPPGARARVALSGLSIAEYFRDE 245

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+I
Sbjct: 246 EGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSI 303

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V ++ V  D+  DP   +  + LD   VLNR+++E+G YP VDPL S SR  D     
Sbjct: 304 TSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRSLDPRIVG 363

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  K+   +  ++  ++  +DI  I G     +      V +   I  F+ Q 
Sbjct: 364 EEHYKVARDVQRILQTYKSLQDIIAILGMDELSEED-KLTVARARKIERFMSQP 416


>gi|56236588|gb|AAV84661.1| ATP synthase beta subunit [Cunninghamia lanceolata]
          Length = 423

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 165/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +     S 
Sbjct: 2   NKVRAVAMSATDGLMRGMRVIDTGGPLSVPVGESTLGRIFNVLGEPVDDLGPVDALTTS- 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P     +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFTQLETKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +  ++               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEDD-RLIVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|31544510|ref|NP_853088.1| F0F1 ATP synthase subunit beta [Mycoplasma gallisepticum str.
           R(low)]
 gi|461567|sp|P33253|ATPB_MYCGA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|44302|emb|CAA45551.1| adenosinetriphosphatase [Mycoplasma gallisepticum]
 gi|31541355|gb|AAP56656.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str. R(low)]
 gi|284930564|gb|ADC30503.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str.
           R(high)]
          Length = 471

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 10/363 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  DI     +G  E ++    V        +       GR+ N +G+PID    +    
Sbjct: 52  IGDDIARCIAMGPTEGLARNVKVTSTNQPISVPVGTEVLGRMFNVIGEPIDEKKPIDASV 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I    P   ++    + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 112 KRMSIHRPAPSFADQSNELEIFETGIKVIDLLIPYAKGGKIGLFGGAGVGKTVLVQELIH 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +   + +    + K+ +V    +E P  R    LT +
Sbjct: 172 NIATGHGGLSVFAGVGERTREGNDLYYEMIEGGVIDKTALVFGQMNEPPGARMRVALTGL 231

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  E+  L ERI 
Sbjct: 232 TMAEYFRDVNNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLAEEMGSLQERI- 290

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R++A  G +P V+PL S S
Sbjct: 291 -TSTKSGSITSVQAIYVPADDLTDPAPSTTFTHLDAKTVLDRNIASLGIFPAVNPLDSTS 349

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           RL D +       +    +  ++ +F E +DI  I G     +      V +   I +FL
Sbjct: 350 RLLDPSVVGIQHYQTARKVQMILQKFLELQDIIAILGIDELSEED-KLTVSRARKIRNFL 408

Query: 418 KQS 420
            Q 
Sbjct: 409 SQP 411


>gi|221061747|ref|XP_002262443.1| ATP synthase beta chain, mitochondrial [Plasmodium knowlesi strain
           H]
 gi|193811593|emb|CAQ42321.1| ATP synthase beta chain, mitochondrial,putative [Plasmodium
           knowlesi strain H]
          Length = 559

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 109/434 (25%), Positives = 193/434 (44%), Gaps = 26/434 (5%)

Query: 9   AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINL 67
              ++  +K    + G IS +      V        + + +     +   + +V   +  
Sbjct: 69  TAASKRENKGSSTRMGKISQVIGAVVDVEFEDTPPSILNALETDLDDKKIILEVAQHLGN 128

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
            +V    +   + +  G  V   GR   +       GR++N +G+PID    + K   ++
Sbjct: 129 KVVRTIAMDATDGLVRGQKVVDSGRPISVPVGKETLGRIMNVIGEPIDECGDI-KCKKTL 187

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I  + P   ++        TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 188 PIHREPPLFTDQSTEPALLITGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIMELINNVA 247

Query: 187 FDKV---IISLVGERGREVREFIEDYLGDNL---------------KKSVVVVATSDESP 228
                  + + VGER RE  +   + +   +                K+ +V    +E P
Sbjct: 248 KKHGGYSVFAGVGERTREGNDLYHEMITTGVIKKKKIGNGEYDFNGSKAALVYGQMNEPP 307

Query: 229 ILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287
             R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ 
Sbjct: 308 GARARVALTGLTVAEYFRDEENQDVLLFVDNIYRFTQAGSEVSALLGRIPSAVGYQPTLS 367

Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347
           ++L  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD   VL+RS+AE G 
Sbjct: 368 TDLGALQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRSIAELGI 425

Query: 348 YPPVDPLASVSRLA-DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406
           YP VDPL S SR+       A++ ++  ++  ++  ++  +DI  I G     +      
Sbjct: 426 YPAVDPLDSTSRMLTPDIVGAEQYEVARNVQQILQDYKSLQDIIAILGIDELSEQD-KLT 484

Query: 407 VHQVPIIYDFLKQS 420
           V +   +  FL Q 
Sbjct: 485 VARARKVQRFLSQP 498


>gi|302747336|gb|ADL63149.1| Atp1 [Androsace sarmentosa]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|284999819|dbj|BAI67810.1| ATP synthase beta-subunit [Gloeomonas sp. SAG 6.91]
          Length = 376

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGIEVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEAALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGIAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|56236572|gb|AAV84653.1| ATP synthase beta subunit [Abies lasiocarpa]
          Length = 411

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 163/366 (44%), Gaps = 18/366 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  
Sbjct: 3   KVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-ARTTSP 61

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 62  IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 121

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 122 AHGGVSVFGGVGERTREGNDLYMEMKESGVINEQKISESKVALVYGQMNEPPGARMRVGL 181

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 182 TALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQE 241

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDPL 
Sbjct: 242 RI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVPSRGLAAKGIYPAVDPLD 299

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  ++   +   + R++E +DI  I G     +      V +   I 
Sbjct: 300 STSTMLQPWIVGEEHYEIAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLIVARARKIE 358

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 359 RFLSQP 364


>gi|302747470|gb|ADL63216.1| Atp1 [Gentiana macrophylla]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|302747390|gb|ADL63176.1| Atp1 [Cephalotus follicularis]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|269784282|emb|CBH50786.1| alpha subunit of ATPase [Vibrio sp. C 14.7]
          Length = 390

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 94/395 (23%), Positives = 167/395 (42%), Gaps = 24/395 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G         + +N D V    +G   ++  G  V   GR   +       
Sbjct: 1   MQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEML 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  V      GK+ +   ++  + D     I   +G++   +   +           +VV
Sbjct: 117 RELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIAD 326
             +P  VF    RLLER     +             + G++TA+  +     + +  +  
Sbjct: 237 EAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYREL 356

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
                   +   +D    K +     + + +KQ  
Sbjct: 357 ---AAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ 388


>gi|166712029|ref|ZP_02243236.1| flagellar protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 458

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 144/429 (33%), Positives = 225/429 (52%), Gaps = 6/429 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           E  +   +++ G +     +    T       +G     +        +V+    +  Y+
Sbjct: 30  EPTAGRTLIREGILRRAVGLTLEATG--CEAPMGATCKVEVDGGWVDAEVVGFASERTYL 87

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      +     V    R   +       GRVI++ G P+DG   + + + S+ +   
Sbjct: 88  MPSAELHGLLPNARVVPSRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RAEGSVGMAGV 146

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ +      G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D ++
Sbjct: 147 SINPLAREPITTSLDVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTAADVIV 206

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVR+F+      + L+++VVV A +D  P+ R      A  IAE+F  +G 
Sbjct: 207 VGLIGERGREVRDFVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGL 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA 
Sbjct: 267 NVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAF 326

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +
Sbjct: 327 YTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWR 386

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDV 429
             +  L  L+  +   RD+  IG Y+ G D   D+A+ + P I +FL Q     S   D 
Sbjct: 387 LRIRKLKRLLSAYTANRDLIAIGAYQRGSDPATDEALARWPEIVEFLGQDVHKASVLSDS 446

Query: 430 FQEITKKLQ 438
              + + ++
Sbjct: 447 LSALQQLVE 455


>gi|119350499|gb|ABL63200.1| AtpB [Geminella sp. SAG 54.81]
          Length = 392

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 5   VRAVSMSATDGLMRGMEVIDTGKPLTVPVGQATLGRIFNVLGEPVDNLGPVESKEG-LPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVINEENIGESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEEHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|37545706|gb|AAM97785.1| ATP synthase beta subunit [Stypandra glauca]
          Length = 468

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 178/422 (42%), Gaps = 29/422 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRTVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +V L  D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVXEQDVXLXXDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +          R +E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPWIVGEEHYETAQRXKQXXQRXKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426

Query: 421 PS 422
             
Sbjct: 427 XF 428


>gi|15673746|ref|NP_267920.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281492356|ref|YP_003354336.1| ATP synthase F1 subunit beta [Lactococcus lactis subsp. lactis
           KF147]
 gi|22653662|sp|Q9CES0|ATPB_LACLA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|12724786|gb|AAK05862.1|AE006406_6 ATP synthase alpha subunit [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281376020|gb|ADA65511.1| ATP synthase F1, beta subunit [Lactococcus lactis subsp. lactis
           KF147]
 gi|326407250|gb|ADZ64321.1| F-type H+-transporting ATPase subunit beta [Lactococcus lactis
           subsp. lactis CV56]
          Length = 469

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 113/415 (27%), Positives = 187/415 (45%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNS----DNLGQVIRINLDIVYI 72
           +  G I+ I      V        L +     +V++  N       L   + +    V  
Sbjct: 1   MSSGKITQIIGPVVDVE-FGSDAKLPEINNALIVYKDVNGLKTKITLEVALELGDGAVRT 59

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GRV N LG  IDG +          I  K
Sbjct: 60  IAMESTDGLTRGLEVLDTGKAVSVPVGEATLGRVFNVLGDVIDGGEEFAADAERNPIHKK 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P         +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +   
Sbjct: 120 APTFDELSTANEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGG 179

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF  
Sbjct: 180 ISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+
Sbjct: 240 VQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           +T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR L  +  
Sbjct: 298 VTSIQAIYVPADDYTDPAPATAFAHLDATTNLERRLTQMGIYPAVDPLASSSRALTPEIV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q+
Sbjct: 358 GEEHYEVAMEVQRVLQRYKELQDIIAILGMDELSDDE-KILVGRARRIQFFLSQN 411


>gi|149384697|gb|ABR25157.1| ATP synthase beta chain [Lemmaphyllum microphyllum]
          Length = 426

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMSAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIDEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|145553116|ref|XP_001462233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430071|emb|CAK94860.1| unnamed protein product [Paramecium tetraurelia]
          Length = 499

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/432 (24%), Positives = 186/432 (43%), Gaps = 16/432 (3%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQG------GYISSITSVYYTVTCLSQYVCLGDFVVHQGK 54
           M+       + AE  +     +       G I+ +      V        + + +  QG 
Sbjct: 10  MRAAFSAAKKQAETTATTTTTKATTKTTTGQIAQVIGAVVDVQFDGPLPPILNALQVQGT 69

Query: 55  NSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKP 112
           +   + +V +   D  V    +   E +  G  V    G   I       GR++N +G P
Sbjct: 70  SHKLILEVAQHLGDSRVRTIAMDSTEGLIRGQPVSDLGGPITIPVGPETLGRIMNVIGDP 129

Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172
           ID    + +  +   I  + P  +++    +   TGI+V+D+  P   G +IG+F G+G+
Sbjct: 130 IDERGPI-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGGKIGLFGGAGV 188

Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIED--YLGDNLKKSVVVVATSDESPIL 230
           GK+ L+     +        S+   R     E +           +  ++    +E P  
Sbjct: 189 GKTVLIQELINNVAKAHGGYSVFAGRNDLYHEMVASGVINLSGGSRCALIYGQMNEPPGA 248

Query: 231 RKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289
           R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ ++
Sbjct: 249 RARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSALLGRIPSAVGYQPTLATD 308

Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           L +L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R+L E G YP
Sbjct: 309 LGQLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRALTELGIYP 366

Query: 350 PVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408
            VDPL S SR+ D     +    +   +  L+  ++  +DI  I G     +      V 
Sbjct: 367 AVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQDYKSLQDIIAILGMDELSEDD-KLTVA 425

Query: 409 QVPIIYDFLKQS 420
           +   +  FL Q 
Sbjct: 426 RARKVQRFLSQP 437


>gi|7708497|emb|CAB89936.1| ATP synthase beta subunit [Metrosideros nervulosa]
          Length = 488

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 181/418 (43%), Gaps = 24/418 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G  +  I  V        +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 19  GRXVQIIGPVXDVAFPPGKMPNIYNALVVKGRDTIRSEINVTCEVQQLLGNNRVRAVAMS 78

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 79  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRTTSPIHRSAPAF 137

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 138 IQLXTXLSIFETGIXVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 197

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 198 GGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 257

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 258 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 315

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 316 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 375

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 RIVGEEHYETAQRVKQTLQRYXELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 432


>gi|302747700|gb|ADL63331.1| Atp1 [Zelkova serrata]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 19/351 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           I DG I L   L   G  P ++   SVSR+   A     K++  SL    H
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLEWH 348


>gi|284999813|dbj|BAI67807.1| ATP synthase beta-subunit [Chloromonas augustae]
          Length = 376

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGVEVLDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEAALPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AE+F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEFFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRNLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|269784242|emb|CBH50766.1| alpha subunit of ATPase [Vibrio sp. Rd 16.13]
 gi|269784244|emb|CBH50767.1| alpha subunit of ATPase [Vibrio sp. Rd 6.8]
 gi|269784246|emb|CBH50768.1| alpha subunit of ATPase [Vibrio sp. Rd 8.15]
 gi|269784278|emb|CBH50784.1| alpha subunit of ATPase [Vibrio sp. Cmj 13.4]
 gi|269784286|emb|CBH50788.1| alpha subunit of ATPase [Vibrio sp. Vb 11.11]
          Length = 397

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 94/395 (23%), Positives = 168/395 (42%), Gaps = 24/395 (6%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWC 102
             G+ +   G         + +N D V    +G   ++  G  V   GR   +       
Sbjct: 1   MQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEML 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQ
Sbjct: 58  GRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVV 219
           R  V      GK+ +   ++  + D     I   +G++   +   +           +VV
Sbjct: 117 RELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
           VVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+      P  
Sbjct: 177 VVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGR 236

Query: 280 RGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIAD 326
             +P  VF    RLLER     +             + G++TA+  +     + +  +  
Sbjct: 237 EAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGDVSAFVPT 296

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   + ++ E 
Sbjct: 297 NVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE- 355

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             +     +   +D    K +     + + +KQ  
Sbjct: 356 --LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ 388


>gi|28574560|ref|NP_648836.2| CG5389 [Drosophila melanogaster]
 gi|19527761|gb|AAL89995.1| AT04467p [Drosophila melanogaster]
 gi|28380508|gb|AAF49540.2| CG5389 [Drosophila melanogaster]
          Length = 622

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 113/416 (27%), Positives = 186/416 (44%), Gaps = 23/416 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGI 77
           + G I ++      V    +   + + +  Q     NL  V+     +  +IV    +  
Sbjct: 102 RKGVIHAVIGPVIDVYFEEEVPEVLNALQVQDAPIANL--VLEVFHHLGNNIVRCVAMDS 159

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E +  G  V   G   R++      GR++N +G PID    + K D    I ++ P   
Sbjct: 160 TEGLRRGQPVLDTGYPIRVAVGKAVLGRILNVVGDPIDDRGEV-KSDFYSFIHNEAPELT 218

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
           +     +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +  
Sbjct: 219 DLSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFV 278

Query: 194 LVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
             GER RE  +   + +        D+  K V+V    +E P  R    LT +TIAEYF 
Sbjct: 279 GAGERTREGNDLYHEMIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFR 338

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
                +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G
Sbjct: 339 DVDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNG 396

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 397 SITSVQAVYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDV 456

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +  ++   +  ++  +DI  I G     +      V +   +  FL Q 
Sbjct: 457 VGEEHYNVARAVQKTLQAYKSLQDIIAILGMDELSEED-KLTVARARKMQRFLSQP 511


>gi|302747466|gb|ADL63214.1| Atp1 [Geissois biagiana]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKALDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|219112331|ref|XP_002177917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410802|gb|EEC50731.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 501

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 115/458 (25%), Positives = 195/458 (42%), Gaps = 33/458 (7%)

Query: 7   TLAQL--AEDYSKNLVVQG-GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLG 60
            +AQL  A  YS    + G G ++ +      V     L + +   +  V  G     L 
Sbjct: 6   RIAQLGGARAYSSTAALWGAGKVTQVIGAVVDVQFDEKLPKILNALEVEVVAGAERLVLE 65

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
               +  + V    +   + +  G      G   ++       GR+IN +G+P+D    +
Sbjct: 66  VAQHLGENTVRTIAMESTDGLVRGQKCVDTGAPIQVPVGPDTLGRIINVIGEPVDEKGPI 125

Query: 120 ---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
               + +    +    P    + R +    TGI+V+D+  P   G +IG+F G+G+GK+ 
Sbjct: 126 FLSKEAEKYAPLHRAAPTFTEQGRSQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 185

Query: 177 LLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL------------KKSVVVV 221
           ++     +   +     + + VGER RE  +   + +   +             K+ +V 
Sbjct: 186 VIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVIKIDEKTGSTAGSKAALVY 245

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT + IAEYF  +   +VLL +D+I RF  +  E++   G +P A 
Sbjct: 246 GQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAV 305

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +++  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+R
Sbjct: 306 GYQPTLATDMGALQERI--TSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR 363

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           S+AE G YP VDPL S SR+ D          +  S   L+  ++  +DI  I G     
Sbjct: 364 SIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARSTQKLLQDYKSLQDIIAILGMDELS 423

Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           +      V +   +  F+ Q        +VF     K 
Sbjct: 424 EDD-KLTVSRARKVQKFMSQP---FHVAEVFTGTAGKF 457


>gi|195442758|ref|XP_002069113.1| GK24170 [Drosophila willistoni]
 gi|194165198|gb|EDW80099.1| GK24170 [Drosophila willistoni]
          Length = 685

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/417 (26%), Positives = 183/417 (43%), Gaps = 23/417 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
            + G I ++      V    +   + + +       ++L  V+     +  ++V    + 
Sbjct: 116 RREGQIQAVIGPVIDVYFPDELPEVLNAIEVIDAPVEHL--VLEVFHHLGANVVRCVAMD 173

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E +  G  V   G   R+       GR++N +G PIDG   + K D    I +  P  
Sbjct: 174 STEGLRRGQKVIDTGYPIRVPVGKAVLGRILNVVGDPIDGRGEV-KSDFYSFIHNDAPEL 232

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            +    ++   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 233 EDLSVKQEMLVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVF 292

Query: 193 SLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              GER RE  +   + +        D+  K  +V    +E P  R    LT +TIAEYF
Sbjct: 293 VGAGERTREGNDLYHEMIESKVISIDDDSSKVSLVFGQMNEPPGARSRIVLTGLTIAEYF 352

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    
Sbjct: 353 RDIDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRN 410

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V +V V  D+  DP   +  S LD   VL+R +AE G YP VDPL SVSR+ D  
Sbjct: 411 GSITSVQAVYVPADDLTDPAPSATFSHLDATTVLSRQIAELGIYPSVDPLDSVSRILDPE 470

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +   +   +   +  ++  +DI  I G     +      V +   +  F  Q 
Sbjct: 471 IVGEEHYNVARLVQKTLQSYKSLQDIIAILGMDELSEDD-KLTVTRARKMQRFFSQP 526


>gi|149384409|gb|ABR25027.1| ATP synthase beta chain [Asplenium planicaule]
          Length = 426

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|332707648|ref|ZP_08427676.1| ATP synthase F1 subcomplex beta subunit [Lyngbya majuscula 3L]
 gi|332353557|gb|EGJ33069.1| ATP synthase F1 subcomplex beta subunit [Lyngbya majuscula 3L]
          Length = 482

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 185/421 (43%), Gaps = 25/421 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSD-----NLGQVIRINLDI-VYIC 73
              G I+ I      V   S  +  + + +  +GKN          +V ++  D  V   
Sbjct: 8   TNTGAIAQIIGPVVDVEFPSGKMPQIYNALRIEGKNEAGQDVAVTCEVQQLLGDNQVRSV 67

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D      + +    I    
Sbjct: 68  AMSGTDGLVRGMEVIDTGAPISVPVGKATLGRIFNVLGEPVDNRGP-AESEERFPIHRPA 126

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P     +     F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       +
Sbjct: 127 PKLTELETKPSVFETGIKVIDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATKHGGV 186

Query: 193 SLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   + +          N  K  +V    +E P  R    L+A+T+
Sbjct: 187 SVFGGVGERTREGNDLYNEMMESKVINPDDLNESKIALVYGQMNEPPGARMRVGLSALTM 246

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +
Sbjct: 247 AEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--T 304

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
              +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +
Sbjct: 305 STNEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSNSTM 364

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   D      ++   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 365 LQPSIVGEDHYGTARAVQATLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQ 423

Query: 420 S 420
            
Sbjct: 424 P 424


>gi|322387993|ref|ZP_08061600.1| ATP synthase F1 sector beta subunit [Streptococcus infantis ATCC
           700779]
 gi|321141266|gb|EFX36764.1| ATP synthase F1 sector beta subunit [Streptococcus infantis ATCC
           700779]
          Length = 468

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 113/413 (27%), Positives = 192/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    +      V+ + L+    ++    
Sbjct: 1   MSSGKIAQVIGPVVDVMFAAGEKLPEINNALVVYKNDERKTKIVLEVALELGDGMIRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   GR   +       GRV N LG  ID +   G+      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGRPISVPVGKETLGRVFNVLGDTIDLEAPFGEDAERQPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 TFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF    
Sbjct: 181 VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALAPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   + + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYAVAAEVKRVLQRYHELQDIIAILGMDELSDEE-KTLVARARRIQFFLSQN 410


>gi|302747362|gb|ADL63162.1| Atp1 [Brexia madagascariensis]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|119384841|ref|YP_915897.1| FliI/YscN family ATPase [Paracoccus denitrificans PD1222]
 gi|119374608|gb|ABL70201.1| ATPase, FliI/YscN family [Paracoccus denitrificans PD1222]
          Length = 444

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 169/428 (39%), Positives = 244/428 (57%), Gaps = 5/428 (1%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIV 70
           A      +    G +S+I +       L+ +  LGD VV   ++   L G+++ ++ D  
Sbjct: 6   ARMRRVRMTRHFGQVSAIQAGVILAGGLNSHASLGDRVVFSMRSGQVLNGEIVALHSDQA 65

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  + +S+   V       ++P+  W GR+I+  G+P+DG   L  G        
Sbjct: 66  VILPEGPMDGLSISTRVELVFAPMLAPANAWIGRIIDPFGRPLDGR-PLVAGGEERGFRP 124

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             PPA +R R+     TG+ V D   PL  GQR+G+FAGSG+GKSTLLSM A+    D V
Sbjct: 125 PPPPAASRNRLGGRLDTGLAVFDTLLPLVRGQRMGLFAGSGVGKSTLLSMLAKGVPADVV 184

Query: 191 IISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I+LVGERGRE+REF+E+ LG+    +SVVV ATSD+ P++R+     A+T+AE+F  +G
Sbjct: 185 VIALVGERGRELREFVEETLGEEGMARSVVVAATSDQPPLMRRRCAWAAMTVAEHFRDQG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL + DSITRFA + REIA  +GE P  RG+P S    +  L ER GP     G+ITA
Sbjct: 245 RHVLFLADSITRFAEAHREIALAAGESPSYRGFPPSTSHLIMSLAERSGPGPAGAGDITA 304

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           + SVLV G +  +P+AD +R +LDGH+VL+R++AE GR+P VD L SVSR   +A SADE
Sbjct: 305 IFSVLVAGSDMEEPVADILRGVLDGHVVLDRAIAERGRFPAVDVLRSVSRSLPQAASADE 364

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             L++     +  + E+  +   G Y PG D  LD+AV   P +  F  +   D      
Sbjct: 365 NALIARARATLGTYAESELMIRAGLYAPGSDPALDEAVRLYPALDAFFTRRGGDARQ--S 422

Query: 430 FQEITKKL 437
           F  + + L
Sbjct: 423 FALLAEAL 430


>gi|326468653|gb|EGD92662.1| mitochondrial ATP synthase [Trichophyton tonsurans CBS 112818]
          Length = 505

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 111/444 (25%), Positives = 178/444 (40%), Gaps = 34/444 (7%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR 64
            L  L   Y+       G I  +      V   ++ +   L   V   G     L     
Sbjct: 34  ALQALTARYASTDAANIGKIHQVIGAVVDVKFDTETLPSILNGLVTDNGGQKLVLEVAQH 93

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +   E +  G  V   G   +I       GR++N  G PID    + KG 
Sbjct: 94  LGERVVRTIAMDGTEGLVRGAKVTDTGLPIQIPVGPGTLGRIMNVTGDPIDERGPI-KGV 152

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 153 KMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 212

Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +        S+   VGER RE  +   +         D   K  +V    +E P  R   
Sbjct: 213 NIAKAHGGYSVFTGVGERTREGNDLYHEMQETRVIQLDGESKVALVFGQMNEPPGARARV 272

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            L               VLL +D+I RF  +  E++   G +P A GY  ++  ++  + 
Sbjct: 273 AL--------------TVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQ 318

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL
Sbjct: 319 ERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPL 376

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S SR+ D      D     + +  ++  ++  +DI  I G     +      V +   +
Sbjct: 377 DSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDIIAILGMDELSEAD-KLTVERARKM 435

Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437
             FL Q     +   VF  I   L
Sbjct: 436 QRFLSQP---FTVAQVFTGIEGAL 456


>gi|296273869|ref|YP_003656500.1| ATP synthase F1 subunit beta [Arcobacter nitrofigilis DSM 7299]
 gi|296098043|gb|ADG93993.1| ATP synthase F1, beta subunit [Arcobacter nitrofigilis DSM 7299]
          Length = 464

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/408 (26%), Positives = 185/408 (45%), Gaps = 14/408 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNLGQVIRINLD-IVYICPVGIGE 79
           G I  +      V        + +     +   K    + +V     D  V    + + E
Sbjct: 3   GKIVQVMGPVVDVEFDGYLPEINEAIQVTLADAKADRLILEVAAHIGDSRVRTIAMDMTE 62

Query: 80  EISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G   +   G  ++       GR+ N +G P+D  +++ +      I    P    +
Sbjct: 63  GLTRGQECIAQGGPIQVPVGEAVLGRIFNVIGDPVDEGEAIPEETPRWSIHRAAPTFEEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLV 195
               + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + V
Sbjct: 123 STKAEMFETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGV 182

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   +    N+  K  +      E P  R    LT +T+AEYF  +   +VL
Sbjct: 183 GERTREGNDLYHEMKDSNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           + +D+I RFA S  E++   G +P A GY  ++ SE+ +L ERI  +   KG+IT+V +V
Sbjct: 243 MFVDNIFRFAQSGSEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTAKGSITSVQAV 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SR+        +    
Sbjct: 301 YVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSSSRILSADILGQEHYNT 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 361 ARGVQSVLQKYKDLQDIIAILGMDELSEED-KLVVSRARKIERFLSQP 407


>gi|124806537|ref|XP_001350751.1| ATP synthase beta chain, mitochondrial precursor, putative
           [Plasmodium falciparum 3D7]
 gi|23496878|gb|AAN36431.1|AE014849_50 ATP synthase beta chain, mitochondrial precursor, putative
           [Plasmodium falciparum 3D7]
          Length = 535

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 111/442 (25%), Positives = 197/442 (44%), Gaps = 29/442 (6%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M+KN+    +  E  +K   ++ G I+ +      V        + + +  +  N   + 
Sbjct: 40  MKKNISVGNKNTEVSNK---IKIGKIAQVIGAVVDVEFEDTPPSILNALEVELDNKKLIL 96

Query: 61  QV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118
           +V   +   +V    +   + +  G  V   G    +       GR++N +G+PID    
Sbjct: 97  EVAQHLGNKVVRTIAMDATDGLVRGQEVKDSGNPICVPVGKETLGRIMNVIGEPIDECGH 156

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           +     ++ I    P   ++        TGI+V+D+  P   G +IG+F G+G+GK+ L+
Sbjct: 157 IN-HKKTLPIHRDPPLFTDQSTEPALLITGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLI 215

Query: 179 SMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL---------------KKSVVV 220
                +         + + VGER RE  +   + +   +                K+ +V
Sbjct: 216 MELINNVAKKHGGYSVFAGVGERTREGNDLYHEMITTGVIKKKKIGNNEFDFNGSKAALV 275

Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVA 279
               +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A
Sbjct: 276 YGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFIDNIYRFTQAGSEVSALLGRIPSA 335

Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
            GY  ++ ++L  L ERI  +  + G+IT+V +V V  D+  DP   +  S LD   VL+
Sbjct: 336 VGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLS 393

Query: 340 RSLAEEGRYPPVDPLASVSRLA-DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
           RS+AE G YP VDPL S SR+       A++ ++  ++  ++  ++  +DI  I G    
Sbjct: 394 RSIAELGIYPAVDPLDSTSRMLTPDIVGAEQYQVARNVQQILQDYKSLQDIIAILGIDEL 453

Query: 399 VDLILDKAVHQVPIIYDFLKQS 420
            +      V +   +  FL Q 
Sbjct: 454 SEQD-KLTVARARKVQRFLSQP 474


>gi|302747386|gb|ADL63174.1| Atp1 [Celosia cristata]
          Length = 349

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAVGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|242129046|gb|ACS83602.1| ATP synthase beta subunit 1 [Gossypium hirsutum]
          Length = 557

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/415 (25%), Positives = 184/415 (44%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + H  +    + Q +    ++V    +   E 
Sbjct: 87  GQVCQVIGAVVDVRFDEGLPPILTALEVMDHSIRLVLEVAQHLG--ENMVRTIAMDGTEG 144

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+PID    L K D  + I  + P  +++ 
Sbjct: 145 LVRGQPVLNTGSPITVPVGRATLGRIINVIGEPIDEKGEL-KTDHFLPIHREAPAFVDQA 203

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 204 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 263

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 264 ERTREGNDLYREMIESGVIKLGEKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 323

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 324 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 381

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 382 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHIL 441

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 442 GEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 495


>gi|190571537|ref|YP_001975895.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018939|ref|ZP_03334747.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|226740690|sp|B3CN17|ATPB_WOLPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190357809|emb|CAQ55265.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995890|gb|EEB56530.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 478

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 108/388 (27%), Positives = 173/388 (44%), Gaps = 22/388 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  +IV    +   + +S GD     G    +       GR+ N +G+ ID    L    
Sbjct: 48  IGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVPVGRSTLGRIFNVVGELIDECGPLKGKY 107

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    ++  E+   TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 108 DLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELIN 167

Query: 184 SDCFDK---VIISLVGERGREVREFIEDY--------LGDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   +               ++V+V    +E P  R 
Sbjct: 168 NIAKAHKGFSVFAGVGERTREGNDLYNEMITSNVIDINEHEKSQAVLVYGQMNEPPGARA 227

Query: 233 MAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF   +  +VL  +D+I RF  +  EI+   G +P A GY  ++ +++ 
Sbjct: 228 RVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMG 287

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            + ERI       G+IT+V ++ V  D+  DP   +  S LD   VL+R +AE G YP V
Sbjct: 288 AMQERIA--STTAGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQIAEMGIYPAV 345

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQ 409
           DPL S S+         +   + S +  ++  ++  +DI  I G     D   DK +  +
Sbjct: 346 DPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDE--DKIIVDR 403

Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              I  FL Q        +VF  ++ K 
Sbjct: 404 ARKIQKFLSQP---FHVAEVFTGMSGKF 428


>gi|329768922|ref|ZP_08260349.1| ATP synthase subunit beta [Gemella sanguinis M325]
 gi|328836639|gb|EGF86297.1| ATP synthase subunit beta [Gemella sanguinis M325]
          Length = 471

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 108/377 (28%), Positives = 181/377 (48%), Gaps = 11/377 (2%)

Query: 52  QGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINAL 109
            GK    + +V + I  ++V    +   + ++ G  V   G    +       GRV N L
Sbjct: 38  DGKKEKLVLEVSLEIGDNVVRTIAMSSTDGLNRGAEVVDTGAPISVPVGNYTLGRVFNVL 97

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+ +D  +  G       I  + P         +  +TGI+VID+  P   G +IG+F G
Sbjct: 98  GEAVDHGEEPGAEVQKESIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIKGGKIGLFGG 157

Query: 170 SGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           +G+GK+ L+     +         + + VGER RE  +   +      + K+ +V    +
Sbjct: 158 AGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINKTAMVFGQMN 217

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 218 EPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP 277

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +E+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R+L E
Sbjct: 278 TLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERALTE 335

Query: 345 EGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPLAS SR LA +    +  ++ + +   + ++ E +DI  I G     D   
Sbjct: 336 MGIYPAVDPLASTSRALAPEIVGEEHYQVATRIQRTLQKYRELQDIIAILGMDELSDED- 394

Query: 404 DKAVHQVPIIYDFLKQS 420
            K V +   +  FL Q+
Sbjct: 395 KKTVDRARRVQFFLSQN 411


>gi|255525815|ref|ZP_05392744.1| ATP synthase F1, beta subunit [Clostridium carboxidivorans P7]
 gi|255510458|gb|EET86769.1| ATP synthase F1, beta subunit [Clostridium carboxidivorans P7]
          Length = 466

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 116/407 (28%), Positives = 193/407 (47%), Gaps = 15/407 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
           G +  +      +   ++++        +  G     + +V   +  DIV    +   + 
Sbjct: 5   GKVVQVIGPVVDIKFNTEHLPNIYNAIEIDMGDAGKLVTEVEQHVGDDIVRTVSMEGTDG 64

Query: 81  ISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G D V       +       GR+ N LG+PID         ++  I    P   ++ 
Sbjct: 65  LRRGVDAVDTGAPISVPVGEEVLGRLFNMLGQPIDECGDCNAT-MTYPIHRPAPSFEDQS 123

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     + + VG
Sbjct: 124 VSPEMFETGIKVIDLIAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVG 183

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  KG +VLL 
Sbjct: 184 ERTREGNDLYYEMKESGVIDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+V +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+RS++E G YP VDPL S SR+ D      +  ++ S
Sbjct: 302 PADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVDPLESSSRILDPRIVGEEHYEIAS 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQS 420
           S+ H++ R+ E +DI  I G         D+  V +   I  FL Q 
Sbjct: 362 SVKHILERYRELQDIIAILGVDEL--PETDRLVVVRARRIQRFLSQP 406


>gi|168333944|ref|ZP_02692176.1| ATP synthase F1, beta subunit [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 468

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 111/395 (28%), Positives = 180/395 (45%), Gaps = 18/395 (4%)

Query: 52  QGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINAL 109
           +G N     +V   +  D+V    +   E +  G    + G    +       GR+ N  
Sbjct: 41  EGNNETITVEVAQHLGDDVVRCISMAATEGLVRGMECINTGAPITVPVGDKTLGRIFNVT 100

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G P+D   +         I    P    +    +  +TGI+V+D+  P   G +IG+F G
Sbjct: 101 GDPVDNKPAPDAE--HWPIHRAAPSFEEQSTTAEILETGIKVVDLLCPYLKGGKIGLFGG 158

Query: 170 SGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           +G+GK+ L+    R+   +     + + VGER RE  +   +      + K+ +V    +
Sbjct: 159 AGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLFHEMTDSGVINKTTMVFGQMN 218

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 219 EPPGARMRVALTGLTMAEYFRDESGQDVLLFVDNIFRFIQAGSEVSALLGRIPSAVGYQP 278

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +E+  L ERI  +   KG+IT+V +V V  D+  DP   +  + LD   VL+RS+ E
Sbjct: 279 TLATEVGTLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDAKTVLSRSIVE 336

Query: 345 EGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           +G YP VDPL S SR+ D      D   +   +   + R++E +DI  I G         
Sbjct: 337 QGIYPAVDPLDSTSRILDPQIVGQDHYDVSRQVQATLQRYKELQDIIAILGMDELS--ES 394

Query: 404 DK-AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           DK  V++   +  FL Q        + F  +  K 
Sbjct: 395 DKITVNRARKVQKFLSQP---FHVAETFTGMHGKF 426


>gi|52082873|gb|AAU26017.1| ATPase beta subunit [Manekia naranjoana]
          Length = 466

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 1   GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V        +       GR+ N LG+P+D    +     +  I    P
Sbjct: 59  MSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +  V  D+  DP   +  + LD   VL+R LA +G YP V PL S S + 
Sbjct: 296 TKEGSITSIQAAYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVYPLDSTSTML 355

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +     AV +      FL Q 
Sbjct: 356 QPRIVGEEHYETAQRVKLTSQRYKELQDIIAILGLDELSEED-RLAVARARKNERFLSQP 414


>gi|154424921|emb|CAL18563.1| ATP synthase alpha subunit [Streptococcus constellatus subsp.
           constellatus]
          Length = 367

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 162/375 (43%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ ++ +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGLDNAMS-GELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ LG+P+DG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVDPLGRPVDGLGEV-KTDKTRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYDGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLSDSLFNGGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|253996302|ref|YP_003048366.1| FliI/YscN family ATPase [Methylotenera mobilis JLW8]
 gi|253982981|gb|ACT47839.1| ATPase, FliI/YscN family [Methylotenera mobilis JLW8]
          Length = 482

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 156/439 (35%), Positives = 234/439 (53%), Gaps = 27/439 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G I  +T +      +   + +G    V   +      +V+  + + + + P    + I+
Sbjct: 42  GRIVKLTGLVMEAVGI--KLPIGSACYVPLAEGRRVEAEVVGFDGERMLLMPQSSVDGIT 99

Query: 83  LGDLVFH--------------------WGRFR-ISPSACWCGRVINALGKPIDGDDSLGK 121
            G  VF                       R R +   A   GRV++  G P+D    +  
Sbjct: 100 PGAKVFALEVAESLPKPHHGQPPRRRATDRARHLPVGADLLGRVVDGAGNPLDDLGDIKP 159

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
              S  + ++    + R  +E+    G+R I+    +  GQR+G+FAGSG+GKS LL M 
Sbjct: 160 S-QSSALNARPMNPLMRAPIEEVLDVGVRAINSMLTVGRGQRMGLFAGSGVGKSVLLGMM 218

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240
           AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D   ++R      A T
Sbjct: 219 ARYTTADVIVVGLIGERGREVQEFIEQILGPEGLARSVVVAAPADAPALMRLQGASYATT 278

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           IAE F ++G NVLLI+DS+TR+A + REIA   GE P  +GYP SVF++LP L+ER G  
Sbjct: 279 IAESFRNEGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNG 338

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
            + +G+ITA  +VL +GD+  DPIAD+ R+ILDGHIVL+RSLAE G YP +D   S+SR 
Sbjct: 339 RRGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAIDVEQSISRA 398

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                S + +KL   L  L  R+  + D+  +G Y  G D +LD A+ +  +I   L+Q 
Sbjct: 399 MHNITSPEHQKLARKLKQLNSRYARSVDLINVGAYEAGSDAVLDMAISKHELIERLLQQD 458

Query: 421 PSDLSS-EDVFQEITKKLQ 438
            ++ S  E+  Q +   + 
Sbjct: 459 VAERSDWEESLQFLAAVMH 477


>gi|91204911|ref|YP_537266.1| F0F1 ATP synthase subunit beta [Rickettsia bellii RML369-C]
 gi|118573738|sp|Q1RKD7|ATPB_RICBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|91068455|gb|ABE04177.1| ATP synthase beta chain [Rickettsia bellii RML369-C]
          Length = 473

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 112/435 (25%), Positives = 186/435 (42%), Gaps = 34/435 (7%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M+KN+  + Q+              IS++  V +T       + L     +  K    L 
Sbjct: 1   MKKNIGKITQI--------------ISAVVDVKFTNKGKLPQI-LNALECYNDKQRIVLE 45

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
               I  D V    +   E +  G  V   G    I       GR++N +G+PIDG   +
Sbjct: 46  IAQHIGDDTVRCIAMNSTEGLVRGMEVVDTGSPISIPVGIETLGRIMNVVGEPIDGKGKI 105

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
               +S  I    P    +        TGI+V+D+  P   G +IG+F G+G+GK+ L+ 
Sbjct: 106 KGSSIS-SIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIM 164

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESP 228
               +         + + VGER RE  +   + +             K  +V    +E P
Sbjct: 165 ELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLEEPEKSKVALVYGQMNEPP 224

Query: 229 ILRKMAPLTAVTIAE--YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             R    LT +T+AE     ++G +VL  +D+I RF  +  E++   G +P A GY  ++
Sbjct: 225 GARARVALTGLTVAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 284

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +++  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G
Sbjct: 285 ATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELG 342

Query: 347 RYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPL S S++ D      +   +   +  ++  ++  +DI  I G     +     
Sbjct: 343 IYPAVDPLDSTSQVLDPMIVGEEHYNVARKVQQILQTYKSLQDIIAILGMDELSEED-KL 401

Query: 406 AVHQVPIIYDFLKQS 420
            V +   I  FL Q 
Sbjct: 402 TVSRARKIQRFLSQP 416


>gi|20269408|gb|AAM17931.1| ATP synthase beta subunit [Enkianthus campanulatus]
          Length = 420

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/402 (26%), Positives = 176/402 (43%), Gaps = 28/402 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRIVQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQPINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 79  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTCTTS-PIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  ++               K  +V    +E P  R     TA+T+ 
Sbjct: 198 VFGGVGERTREGNDLYKEMKESGVINEQNIAESKVALVYGQMNEPPGARXRVGFTALTMX 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
                 D   K+   +   + R++E +DI  I G     +  
Sbjct: 376 QPRIVGDEHYKIAQRVKQTLQRYKELQDIIAILGVDELSEED 417


>gi|268679156|ref|YP_003303587.1| ATP synthase F1 subunit beta [Sulfurospirillum deleyianum DSM 6946]
 gi|268617187|gb|ACZ11552.1| ATP synthase F1, beta subunit [Sulfurospirillum deleyianum DSM
           6946]
          Length = 465

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 16/410 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGI 77
            G IS I      V        + + +      +GK    + +V     D  V    + +
Sbjct: 2   NGLISQIMGPVVDVDFNGYLPKINEAIEVNYEVEGKKQKLILEVAAHLGDNRVRTIAMDM 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            E ++ G  V   G   ++       GR+ N +G  ID  + +  G     I  + P   
Sbjct: 62  SEGLTRGIEVKALGNPIQVPVGEEVLGRIFNVVGDVIDQGEPV-AGKTKWSIHREPPKFE 120

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + +
Sbjct: 121 EQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFA 180

Query: 194 LVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +    N+  K  +      E P  R    LT +T+AEYF  +   +
Sbjct: 181 GVGERTREGNDLYHEMKDSNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEMGLD 240

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V 
Sbjct: 241 VLMFIDNIFRFSQSGAEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQ 298

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEK 370
           +V V  D+  DP   +V + LD   VLNRS+AE+G YP VDPL S SR+ +     A+  
Sbjct: 299 AVYVPADDLTDPAPATVFAHLDATTVLNRSIAEKGIYPAVDPLDSSSRMLNPEILGAEHY 358

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 359 NVSRGVQAVLQKYKDLQDIIAILGMDELSEED-KVTVDRARKIERFLSQP 407


>gi|256830795|ref|YP_003159523.1| ATPase, FliI/YscN family [Desulfomicrobium baculatum DSM 4028]
 gi|256579971|gb|ACU91107.1| ATPase, FliI/YscN family [Desulfomicrobium baculatum DSM 4028]
          Length = 448

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 154/419 (36%), Positives = 237/419 (56%), Gaps = 11/419 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL---GQVIRINLDIVYICPVGIGEE 80
           G ++ +  +            LG        ++       +V+    D++ + P G    
Sbjct: 22  GKVTKVVGLVA--EGRGIKAPLGSVCQLLPDDTGKQVINAEVVGFRDDVMLLMPYGEMRG 79

Query: 81  ISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           I  G L+ +     +      + G+ ++A G+ +D + S+     +  + +  P  + R 
Sbjct: 80  IRPGSLIRNTSTPPVFPVGNRYLGQAVDAFGQSLDPEKSIFPARYN-PLHADPPNPLTRP 138

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           R+ +    G+R ++    L  GQR+G+ AGSG+GKSTL+ MFAR    +  +I L+GERG
Sbjct: 139 RITEPLDVGVRAVNGLLTLGKGQRVGIMAGSGVGKSTLMGMFARYTSAEVNVIGLIGERG 198

Query: 200 REVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258
           REV +FI +D   + L KSV++VATSD+ P++R  A   A  +AE+F  +G +VLL++DS
Sbjct: 199 REVVDFIEKDLGPEGLAKSVLIVATSDQGPLVRMRAAYAATAMAEFFRDEGKDVLLMMDS 258

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           +TRFA + RE+   +GE P  RGY  +VFS LPRLLER G S K  G+IT + +VLV+GD
Sbjct: 259 VTRFAMAAREVGLAAGEPPTTRGYTPTVFSHLPRLLERAGRSSK--GSITGIYTVLVEGD 316

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378
           + N+P+AD+VRSILDGHIVL R LA++G YP +D L SVSRLA     A        L  
Sbjct: 317 DFNEPVADAVRSILDGHIVLTRDLADQGHYPSIDVLKSVSRLAPDVTPAPVIAAGRDLIR 376

Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEITKK 436
           ++  F+   D+  IG Y  G +  +D+A++ V  I  FL+QS  + S+ D  F+++ K 
Sbjct: 377 MMATFQRVEDMVNIGAYAAGSNPEIDQALNMVHPIRAFLQQSVEERSTLDQAFEDLKKL 435


>gi|76577972|gb|ABA02340.2| ATP synthase CF1 beta chain [Tetraselmis suecica]
          Length = 484

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 181/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVG 76
           G IS I      VT  +  +        +      G+      +V ++  D  V    + 
Sbjct: 11  GRISQIIGPVVDVTFPAGNMPNIYNSLTIVGKNQSGEEISVTCEVQQLLGDHCVRAVSMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +   D  + I    P  
Sbjct: 71  ATDGLMRGMDVIDNGAPLTVPVGKPTLGRIFNVLGQPVDNLGPVDSTDG-LTIHRTAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 VDLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYMEMKESGVIKESNLTESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDINKQDVLLFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 WILGEEHYSCAQNVKQTLQRYKELQDIIAILGLDELSEED-RQIVARARKIERFLSQP 424


>gi|150187342|emb|CAK30232.1| ATP synthase alpha subunit [Streptococcus mitis]
          Length = 367

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 13/370 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSA 99
           +    G+ ++ +  +    G    +    V I  +G   +I  GD +   G+   +    
Sbjct: 5   ENAMSGELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGE 61

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+ 
Sbjct: 62  SLIGRVVDPLGRPVDGLGEI-HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIG 120

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KK 216
            GQR  +      GK+T+      +        I   +G++   VR  +E          
Sbjct: 121 RGQRELIIGDRQTGKTTIAIDTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDY 180

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      
Sbjct: 181 TIVVTASASQPSPLLFLAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRP 240

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG
Sbjct: 241 PGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDG 300

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L   L   G  P +D  +SVSR+   A     KK+  +L   +  + E         
Sbjct: 301 QIFLGDGLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTK 357

Query: 395 YRPGVDLILD 404
           +   +D    
Sbjct: 358 FGSDLDAATQ 367


>gi|260753212|ref|YP_003226105.1| F0F1 ATP synthase subunit beta [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552575|gb|ACV75521.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 484

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 192/417 (46%), Gaps = 24/417 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V    +   L   +  + +++  + +V   +  ++V    +   + + 
Sbjct: 11  GRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLV 70

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   R+       GR++N +G+P+D    +G    +M I +  PP   +   
Sbjct: 71  RGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIG-SKQTMPIHADAPPFTEQSTD 129

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 130 TAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGER 189

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   ++L   +              K  +V    +E P  R    L+ +T+AEYF
Sbjct: 190 TREGNDLYHEFLEAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYF 249

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  +K
Sbjct: 250 RDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKK 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADK 363
           G+IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR L  +
Sbjct: 308 GSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPR 367

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  K    +  ++ R++  +DI  I G     +    K V +   I  FL Q 
Sbjct: 368 IVGDEHYKTARDVQEILQRYKNLQDIIAILGMDELSEDD-RKVVGRARRIQRFLSQP 423


>gi|302747682|gb|ADL63322.1| Atp1 [Trithuria lanterna]
          Length = 340

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 83/338 (24%), Positives = 145/338 (42%), Gaps = 16/338 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GD+V   G     P      GRV++ALG+ IDG  +
Sbjct: 4   GIALNLENENVGIVVFGSDTAIKEGDIVKRTGSIVDVPAGKAMLGRVVDALGQTIDGRGA 63

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 64  LSDHE-RRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 122

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDE 226
                +                 +   +G++   V + ++     +    S++V AT+ +
Sbjct: 123 IDTILNQKQLQKKSAGGSETLYCVYVAIGQKRSTVAQLVQIMEEAHAMEYSILVAATASD 182

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 183 PAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 242

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 243 FYLHSRLLERAAKRSDQTFAGSLTALPIIETQAGDVSAYIPTNVISITDGQICLETELFY 302

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 303 RGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 340


>gi|307720697|ref|YP_003891837.1| ATP synthase F1 subcomplex subunit beta [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978790|gb|ADN08825.1| ATP synthase F1 subcomplex beta subunit [Sulfurimonas autotrophica
           DSM 16294]
          Length = 464

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 185/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLD-IVYICPVGIG 78
           G IS +      V        + + +      +G     + +V     D  V    + + 
Sbjct: 3   GKISQVMGPVVDVDFDGNLPAINEAIEVNVNLEGSEHRLVLEVAAHLGDGRVRTIAMDMS 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G      G    +       GR+ N +G+ IDG + +     +  I  + P  ++
Sbjct: 63  EGLVRGMAAKATGAPISVPVGEKVLGRIFNVIGETIDGGEQVSDAP-TWSIHREPPALVD 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         + + 
Sbjct: 122 QSTTTEMFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAHGHEGLSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252
           VGER RE  +   +    N+  K  +      E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYYEMKESNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKKLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RFA S  E++   G +P A GY  ++  E+  L +RI  +  + G+IT+V +
Sbjct: 242 LMFIDNIFRFAQSGSEMSALLGRIPSAVGYQPTLAREMGALQDRI--TSTKDGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKK 371
           V V  D+  DP   SV + LD   VLNR +AE+G YP VDPL S SRL D      +   
Sbjct: 300 VYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRLLDPQILGEEHYN 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   + ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQQTLQKYKDLQDIIAILGMDELSEDD-KNVVERARKIEKFLSQP 407


>gi|284999815|dbj|BAI67808.1| ATP synthase beta-subunit [Chloromonas rubrifilum]
          Length = 376

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLTRGIDVIDTGKPLTVPVGKATLGRIFNVLGEPVDNLGPV-KAEAALPIHRS 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKSLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDFNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP      + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E  DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQDVKKTLQRYKELTDIIAILGLDELSEED-RLVVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|63091847|emb|CAH58774.1| ATP synthase alpha chain [Carnobacterium divergens]
          Length = 367

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 155/369 (42%), Gaps = 13/369 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSA 99
           +    G+ +          G    +  + V I  +G  EEI  GD V   GR   +    
Sbjct: 6   ENAMAGELLEFSNG---VFGMAQNLESNDVGIIILGPFEEIREGDKVRRTGRIMEVPVGE 62

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV+N+LG+P+DG   + K   +  + +  P  M R+ V +  +TG++ ID   P+ 
Sbjct: 63  ALIGRVVNSLGQPVDGLGEI-KTSKTRPVETLAPGVMQRKSVSEPLQTGLKAIDALVPIG 121

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG-DNLKK 216
            GQR  V      GK+++      +        I   +G++   VR  +E       +  
Sbjct: 122 RGQRELVIGDRKTGKTSIAIDTIINQKGKDMICIYVAIGQKESTVRNQVETLKKFGAMDY 181

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A++ +   +  +AP +   + E F   G +VL++ D +++ A + REI+      
Sbjct: 182 TIVVTASASQPAPMLFIAPYSGSAMGEEFMYNGKHVLIVFDDLSKQAAAYREISLLLRRP 241

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    YP  VF    RLLER      E   G++TA+  V     + +  I  +V SI DG
Sbjct: 242 PGREAYPGDVFYLHSRLLERAAKLNDELGGGSMTALPFVETQAGDISAYIPTNVISITDG 301

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L   L   G  P V    SVSR+   A     KK+  +L   +  F E         
Sbjct: 302 QIFLESDLFYAGTRPAVAAGLSVSRVGGAAQIKAMKKVAGTLRLDLASFRELE---AFTQ 358

Query: 395 YRPGVDLIL 403
           +   +D   
Sbjct: 359 FGSDLDAAT 367


>gi|42558428|gb|AAS19923.1| ATP synthase beta chain [Xiphopteris conjunctisora]
          Length = 422

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVQSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|149798641|gb|ABR32011.1| ATP synthase beta chain [Adiantopsis radiata]
          Length = 426

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G +    G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMVAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|5031149|gb|AAD38085.1|AF093424_1 ATP synthase beta subunit [Tasmannia insipida]
 gi|33327775|gb|AAQ09251.1| ATP synthase beta subunit [Tasmannia lanceolata]
          Length = 494

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQIYVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKXSGVINEENIAESKVALVHGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTSQRYKELQDIIGILGSDELSEED-RLTVARARKIERFLSQP 430


>gi|20384959|gb|AAM19146.1| ATP synthase beta subunit [Desmidium sp. UTEX LB 612]
          Length = 402

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNRVRAVAMSATDGLMRGMEVLDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVNAT- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDNITDSKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGSEHYETAQGVKKTLQRYKELQDIIAILGLDELSEDD-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 358 RKVERFLSQP 367


>gi|290890142|ref|ZP_06553224.1| hypothetical protein AWRIB429_0614 [Oenococcus oeni AWRIB429]
 gi|21684964|emb|CAD22547.1| F1F0-ATPase subunit beta [Oenococcus oeni]
 gi|290480186|gb|EFD88828.1| hypothetical protein AWRIB429_0614 [Oenococcus oeni AWRIB429]
          Length = 504

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 10/365 (2%)

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           I +   +V    +   + ++ G  V   G    +       GRV N LG+P+DG D +  
Sbjct: 85  IDLGDSVVRTIAMDSTDGLTRGMKVLDTGAPIEVPVGEATLGRVFNVLGEPVDGGDPIPN 144

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 I    P         +  +TGI+VID+  P   G + G+F G+G+GK+ L+   
Sbjct: 145 SVDRHPIHRSAPKYDELATSAEVLETGIKVIDLLEPYLRGGKTGLFGGAGVGKTVLIQEL 204

Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237
             +       IS+   VGER RE  +   +     + K + +V    +E P  R    LT
Sbjct: 205 IHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLKNTAMVYGQMNEPPGARMRVGLT 264

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AE F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ER
Sbjct: 265 GLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQER 324

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL ++G YP VDPL S
Sbjct: 325 I--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLES 382

Query: 357 V-SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             S L       D  ++ + + H + R++E +DI  I G     D      V++   I  
Sbjct: 383 TSSALTPDIVGEDHYEVATQVQHFLQRYKELQDIISILGMDELSDEE-KTIVNRARRIQF 441

Query: 416 FLKQS 420
           FL Q 
Sbjct: 442 FLSQP 446


>gi|302747500|gb|ADL63231.1| Atp1 [Hydrophyllum virginianum]
          Length = 349

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESERLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|332523894|ref|ZP_08400146.1| ATP synthase F1, beta subunit [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315158|gb|EGJ28143.1| ATP synthase F1, beta subunit [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 468

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID ++   
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGDTIDLEEPFS 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  ++ R+ E +DI  I G     +      V +   I 
Sbjct: 346 SSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILGMDELSEDE-KTLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|149798741|gb|ABR32061.1| ATP synthase beta chain [Pteris vittata]
          Length = 426

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|42558432|gb|AAS19925.1| ATP synthase beta chain [Microgramma percussa]
          Length = 422

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPV-RSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|112791398|gb|ABI21969.1| ATP synthase beta subunit [Pantoea agglomerans]
          Length = 425

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 174/366 (47%), Gaps = 13/366 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V       ++       GR++N LG+PID    L + D
Sbjct: 21  LGGGVVRTIAMGTSDGLKRGLSVNDLQKPIQVPVGKATLGRIMNVLGEPIDMKGELKEED 80

Query: 124 LSM----EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            S      I    P   ++   ++  +TGI+VID+  P   G ++G+F G+G+GK+  + 
Sbjct: 81  GSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMM 140

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235
              R+   +     + + VGER RE  +F  +    N + K  +V    +E P  R    
Sbjct: 141 ELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVALVYGQMNEPPGNRLRVA 200

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L E
Sbjct: 201 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 260

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT+V +V V  D+  DP   +  + LD  + L+R +A  G YP VDPL 
Sbjct: 261 RI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAVDPLD 318

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR  D      +   +   +  L+ R++E +DI  I G     +      V +   I 
Sbjct: 319 STSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDIIAILGMDELSEED-KLLVARARKIQ 377

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 378 RFLSQP 383


>gi|89574025|gb|ABD77238.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Oryctolagus cuniculus]
          Length = 422

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 105/386 (27%), Positives = 180/386 (46%), Gaps = 18/386 (4%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
           +  QG+ +  + +V   +    V    +   E +  G  V   G   +I       GR++
Sbjct: 2   LEVQGRKTRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIM 61

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+PID    + K      I ++ P  +     ++   TGI+V+D+  P   G +IG+
Sbjct: 62  NVIGEPIDERGPI-KTKQFAAIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGL 120

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKK 216
           F G+G+GK+ L+     +         + + VGER RE  +   + +        D   K
Sbjct: 121 FGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSK 180

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G 
Sbjct: 181 VALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGR 240

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 241 IPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 298

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R++AE G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G
Sbjct: 299 TVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILG 358

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      V +   I  FL Q 
Sbjct: 359 MDELSEED-KLTVSRARKIQRFLSQP 383


>gi|52082213|ref|YP_081004.1| F0F1 ATP synthase subunit beta [Bacillus licheniformis ATCC 14580]
 gi|52787604|ref|YP_093433.1| F0F1 ATP synthase subunit beta [Bacillus licheniformis ATCC 14580]
 gi|319648086|ref|ZP_08002303.1| ATP synthase subunit beta [Bacillus sp. BT1B_CT2]
 gi|81825160|sp|Q65DX4|ATPB_BACLD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|52005424|gb|AAU25366.1| ATP synthase (subunit beta) [Bacillus licheniformis ATCC 14580]
 gi|52350106|gb|AAU42740.1| AtpD [Bacillus licheniformis ATCC 14580]
 gi|317389721|gb|EFV70531.1| ATP synthase subunit beta [Bacillus sp. BT1B_CT2]
          Length = 473

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 106/415 (25%), Positives = 186/415 (44%), Gaps = 23/415 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF-----VVHQGKNSDNLGQ------VIRINLDIVYI 72
           G +S +      V     ++   +      V H+ +N + +         + +  D V  
Sbjct: 4   GRVSQVLGPVVDVRFEDGHLP--EIYNAIKVTHKAQNENEVDIDLTLEVALHLGDDSVRT 61

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G      G    +       GRV N LG+ ID D+ L        I  +
Sbjct: 62  IAMASTDGVTRGMEAIDLGEPISVPVGNVTLGRVFNVLGENIDLDEPLPADAAKDPIHRE 121

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   
Sbjct: 122 APKFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGG 181

Query: 191 --IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AE+F  
Sbjct: 182 ISVFAGVGERTREGNDLYYEMKDSGVIGKTAMVFGQMNEPPGARMRVALTGLTMAEHFRD 241

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           K   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +    G+
Sbjct: 242 KEGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNVGS 299

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           +T++ ++ V  D++ DP   +  + LD    L R L+E G YP VDPLAS SR       
Sbjct: 300 VTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEIV 359

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++  S+  ++ R++E +DI  + G     D      V +   +  FL Q+
Sbjct: 360 GEEHYEVARSVQQILQRYKELQDIIAMLGMDELSDED-KLVVSRARRVQFFLSQN 413


>gi|4519276|dbj|BAA75553.1| ATP synthase beta-subunit [Volvox dissipatrix]
          Length = 376

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVIDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVI-VEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|11320813|dbj|BAB18459.1| ATP synthase beta-subunit [Lobomonas monstruosa]
          Length = 376

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTDGLMRGMDVLDTGKPLSVPVGKVTLGRIFNVLGEPVDEMGDV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFVDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYETAQNVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|302747444|gb|ADL63203.1| Atp1 [Ehretia anacua]
          Length = 349

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESERLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+  AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFFAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|319787097|ref|YP_004146572.1| ATPase, FliI/YscN family [Pseudoxanthomonas suwonensis 11-1]
 gi|317465609|gb|ADV27341.1| ATPase, FliI/YscN family [Pseudoxanthomonas suwonensis 11-1]
          Length = 471

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 143/414 (34%), Positives = 223/414 (53%), Gaps = 13/414 (3%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQ-GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV- 87
            +V  T+        +G     +         +V+    D   + P      +     V 
Sbjct: 54  RAVGLTLEATGCEAPMGATCKVEVADGGWVEAEVVGFAGDRTSLMPSAELHGLLPNARVV 113

Query: 88  ---FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
                 G   +       GRVI++ G P+DG   + + + S+ +       + R+ + + 
Sbjct: 114 PVRRRGG---VEVGEGLLGRVIDSDGVPLDGKGPV-RAEGSVGMAGVAINPLAREPIIQP 169

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204
              G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+
Sbjct: 170 LDVGVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRD 229

Query: 205 FI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           F+      + L+++VVV A +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA
Sbjct: 230 FVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFA 289

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323
            + REI  + GE P  RGYP SVF++LP L+ER G     +G+ITA  +VL +GD+  DP
Sbjct: 290 QAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAAGRGSITAFYTVLTEGDDPQDP 349

Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383
           IAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         ++ + +L  L+  +
Sbjct: 350 IADAARAILDGHILLSRRIADAGLYPAIDVESSVSRVVQDIADETWRERIRALKRLVAAY 409

Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
              RD+  IG Y+ G D ++D+A+ + P I +FL Q   D+      Q+  + L
Sbjct: 410 NANRDLIAIGAYQRGNDPVVDEALARWPEIMEFLGQ---DVLRSADLQQSRQAL 460


>gi|302747462|gb|ADL63212.1| Atp1 [Galium sp. Qiu 95025]
          Length = 349

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESEILYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|259046359|ref|ZP_05736760.1| ATP synthase F1 sector subunit beta [Granulicatella adiacens ATCC
           49175]
 gi|259036996|gb|EEW38251.1| ATP synthase F1 sector subunit beta [Granulicatella adiacens ATCC
           49175]
          Length = 474

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +    V    +   + +  G  V   GR   +       GRV N LG  ID  +   
Sbjct: 50  AVELGDGAVRTIAMESTDGLQRGMKVVDLGRTISVPVGPETLGRVFNVLGDTIDLKEPFP 109

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +     EI    P         +  +TGI+VID+  P   G +IG+F G+G+GK+ L+  
Sbjct: 110 EDFTRHEIHKPAPKFEELNSQYEILQTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIQE 169

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +     +  K+ +V    +E P  R    L
Sbjct: 170 LIHNIAEELGGISVFTGVGERTREGNDLYHEMQESGVSAKTAMVFGQMNEPPGARMRVAL 229

Query: 237 TAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 230 TGLTIAEYFRDMEKQDVLLFIDNIYRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 289

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  S  + G+IT++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA
Sbjct: 290 RI--SSTKDGSITSIQAIYVPADDYTDPAPATTFAHLDATTNLERRLTEQGIYPAVDPLA 347

Query: 356 SV-SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S  S L  +    +  ++   +  ++ R+ E +DI  I G     D      V++   I 
Sbjct: 348 STSSALTPEIVGEEHYEVAMKVQQMLQRYRELQDIIAILGIDELSDSE-KVIVNRARRIQ 406

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 407 FFLSQN 412


>gi|20146590|gb|AAM12449.1| ATP synthase alpha subunit [Maesa tenera]
          Length = 356

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 83/359 (23%), Positives = 149/359 (41%), Gaps = 19/359 (5%)

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
            I   G    I  GDLV   G     P      GRV++ALG PIDG  SL   +    + 
Sbjct: 1   GIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGSLSDHE-RRRVE 59

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD- 188
            K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +     
Sbjct: 60  VKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKKMN 119

Query: 189 ----------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLT 237
                       +   +G++   V + ++    G+ ++ S++V AT  +  +L+ +AP  
Sbjct: 120 SRSTSESETLYCVYVAIGQKRSTVAQLVQILSEGNAMEYSILVAATGWDPALLQFVAPYC 179

Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
              + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER 
Sbjct: 180 GCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERA 239

Query: 298 GPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
                +   G++TA+  +     + +  I  +V  I DG I     L   G  P ++   
Sbjct: 240 AKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGL 299

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           SVSR+   A     K++  S    + ++ E      +  +   +D      +++   + 
Sbjct: 300 SVSRVGSAAQLKAMKQVCGSSKLELAQYREG---AALAQFGSDLDAATQALLNRGARLT 355


>gi|149384707|gb|ABR25162.1| ATP synthase beta chain [Microsorum varians]
          Length = 426

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMSAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|119509845|ref|ZP_01628988.1| ATP synthase subunit B [Nodularia spumigena CCY9414]
 gi|119465454|gb|EAW46348.1| ATP synthase subunit B [Nodularia spumigena CCY9414]
          Length = 482

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 188/420 (44%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           GYI+ I      V      +  + + +  +G N    GQ I++ +++        V    
Sbjct: 11  GYITQIIGPVVDVKFAGGKLPQIYNALTIKGSNEA--GQEIKLTVEVQQLLGDNQVRTVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +   + ++ I    P
Sbjct: 69  MSSTDGLIRGLEVVDTGAPISVPVGKVTLGRIFNVLGEPVDNQGPVN-AEQTLPIHRPSP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
              + +     F+TGI+V+D+ TP   G +IG+F G+G+GK+ ++     +         
Sbjct: 128 KFTDLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIATQHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + + VGER RE  +   + +             K  +V    +E P  R    L+ +T+A
Sbjct: 188 VFAGVGERTREGNDLYNEMMESGVINKDNLNESKIALVYGQMNEPPGARMRVGLSGLTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 248 EYFRDVSKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S + 
Sbjct: 306 TTEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTML 365

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  D      ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 QPEIVGDDHYSTARAVQSTLQRYKELQDIIAILGLDELSEED-RLIVARARKVERFLSQP 424


>gi|11559334|dbj|BAB18825.1| ATP synthase beta-subunit [Yamagishiella unicocca]
          Length = 376

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRS 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|298253176|ref|ZP_06976968.1| F0F1-type ATP synthase, alpha subunit [Gardnerella vaginalis 5-1]
 gi|297532571|gb|EFH71457.1| F0F1-type ATP synthase, alpha subunit [Gardnerella vaginalis 5-1]
          Length = 490

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 163/378 (43%), Gaps = 18/378 (4%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117
           +G    ++   + +  +G    I  G  V+  G    +     + GR ++ LG PIDG  
Sbjct: 1   MGLAFNLDAHEIGVVILGDFTGIEEGQEVYRTGEVLSVPVGDAYLGRTVDPLGNPIDGLG 60

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK--- 174
           ++   +  + + ++ P  ++R  V++   TG++ ID  TP+  GQR  +      GK   
Sbjct: 61  AIECNERRI-LEAQAPDVIHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAI 119

Query: 175 --STLLSMFARSDCFD-----KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDE 226
              T+++  A  +  D     + I   +G++G  +    +        K + +V + + +
Sbjct: 120 AIDTIINQRANWETGDPKKQVRCIYVAIGQKGSTIASVRQSLEEAGAMKYTTIVASPASD 179

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           S   + +AP T   I +++   G +VL++ D +++ A + R I+      P    YP  V
Sbjct: 180 SAGFKYIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDV 239

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++T +  +    ++ +  I  +V SI DG I L   L  
Sbjct: 240 FYLHSRLLERCAKLSDDLGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFN 299

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
            G+ P VD   SVSR+   A +   KK+   L   + R++      +   +   +D    
Sbjct: 300 AGQRPAVDVGISVSRVGGAAQAKALKKVSGMLKISLARYKSLESFAM---FASDLDAASK 356

Query: 405 KAVHQVPIIYDFLKQSPS 422
             + +   + + LKQ   
Sbjct: 357 AQLTRGARLTELLKQKQF 374


>gi|80090|pir||S17724 H+-transporting two-sector ATPase (EC 3.6.3.14) alpha chain -
           Bacillus firmus
          Length = 504

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/432 (21%), Positives = 170/432 (39%), Gaps = 17/432 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             + Q  E +  ++ VQ  G +  +         L + V  G+ +         +G    
Sbjct: 10  SLIKQQIESFQSDVQVQDVGTVIRVGDGIALAHGL-ENVMAGELLEFSNG---VMGMAQN 65

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + + I  +G   +I  GD V   GR   +       GRV+  + +PIDG   +    
Sbjct: 66  LEENNIGIIILGPYTDIREGDEVKRTGRIMEVPVGEELLGRVVKPVRQPIDGLGPIATTK 125

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMF 181
            S  I S  P  M+R+ V +  +TGI+ ID   P+  GQR  +      GK+ +   ++ 
Sbjct: 126 -SRPIESPSPGVMDRKSVHEPLQTGIKSIDTMIPIGRGQRELIIGDRQTGKTAIAIDTIL 184

Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
            + D     I   +G++   V   +E          ++VV A++ +   +  +AP   V+
Sbjct: 185 NQKDEDMICIYVAIGQKDSTVAGVVETLGQRGALDYTIVVSASASDPAPMLFLAPYAGVS 244

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           + E F   G +VL+I D +++ A + RE++      P    +P  VF    RLLER    
Sbjct: 245 MGEEFMYNGKHVLVIYDDLSKQASAYRELSLLLRRPPGREAFPGDVFYLHSRLLERAAKL 304

Query: 301 EKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G++TA+  +     + +  I  +V SI DG I L   L   G     +   S  
Sbjct: 305 SDAKGGGSLTALPFIETHAGDVSAYIPTNVISITDGQIFLQSDLFYSGIRLAPNAGLSGI 364

Query: 359 RLADKAWS--ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
            +   + +     KK+  +L   +  + E         +   +D      + +     + 
Sbjct: 365 NVLGGSATRLKAMKKVSGTLRLDLPAYRELE---AFAQFGSDLDKATRAKLTRGQRTVEV 421

Query: 417 LKQSPSDLSSED 428
           LKQ   +    +
Sbjct: 422 LKQDLHNPLPVE 433


>gi|24379917|ref|NP_721872.1| F0F1 ATP synthase subunit beta [Streptococcus mutans UA159]
 gi|26006949|sp|P95789|ATPB_STRMU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|24377897|gb|AAN59178.1|AE014985_2 FoF1 membrane-bound proton-translocating ATPase, beta subunit
           [Streptococcus mutans UA159]
          Length = 468

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  VF  GR   +       GRV N LG  ID D    
Sbjct: 48  ALELGDGLVRTIAMESTDGLTRGLEVFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P   +     +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPSFDDLSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + + H++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALSPEIVGQEHYDVATEVQHVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|195160213|ref|XP_002020970.1| GL25088 [Drosophila persimilis]
 gi|194118083|gb|EDW40126.1| GL25088 [Drosophila persimilis]
          Length = 661

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 184/414 (44%), Gaps = 23/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIGE 79
           G+I ++      V    +   + + +  +      L  V+     +  +IV    +   E
Sbjct: 113 GHIHAVIGPVIDVYFPEEVPDILNAIEVEDAPIGRL--VLEVFQHLGNNIVRCVAMDATE 170

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            I  G  V   G   R++      GR++N +G PID    + K +    I ++ P     
Sbjct: 171 GIKRGQKVVDTGYPIRVAVGKAVLGRILNVVGDPIDERGEV-KSEYHSFIHTEAPVLTEL 229

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +    
Sbjct: 230 SVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFVGA 289

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        ++  K V+V    +E P  R    LT +TIAEYF   
Sbjct: 290 GERTREGNDLYHEMIESKVISLEEDTSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDI 349

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +    G+I
Sbjct: 350 DGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSI 407

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T+V +V V  D+ +DP   +  + LD   VL+R +AE G YP VDPL S SR+ D     
Sbjct: 408 TSVQAVYVPADDLSDPAPAATFTHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVG 467

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++   +  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 468 EEHYNVARAVQKTLQGYKSLQDIIAILGMDELSEED-KITVARARKIQRFLSQP 520


>gi|290580103|ref|YP_003484495.1| FoF1 membrane-bound proton-translocating ATPase subunit beta
           [Streptococcus mutans NN2025]
 gi|4239652|gb|AAD13383.1| ATPase, beta subunit [Streptococcus mutans]
 gi|254997002|dbj|BAH87603.1| FoF1 membrane-bound proton-translocating ATPase beta subunit
           [Streptococcus mutans NN2025]
          Length = 468

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  VF  GR   +       GRV N LG  ID D    
Sbjct: 48  ALELGDGLVRTIAMESTDGLTRGLEVFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
           +      I  K P   +     +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 EDAERQPIHKKAPSFDDLSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLA 345

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + + H++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALSPEIVGQEHYDVATEVQHVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|170516162|gb|ACB15091.1| ATPase alpha subunit [Tsuga dumosa]
          Length = 343

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 85/347 (24%), Positives = 147/347 (42%), Gaps = 19/347 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           I   G    I  G LV   G    +       GRV++ALG PIDG  +L +  L   + +
Sbjct: 1   IVVFGSDTAIKEGSLVKRTGSIVSVPVGKAMLGRVVDALGVPIDGKGALSEHLLRR-VEA 59

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---- 186
           K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +      
Sbjct: 60  KAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRMNS 119

Query: 187 -------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
                      +   +G++   V + ++     D L+ S+ V AT+ +   L+ MAP + 
Sbjct: 120 KSKADSEKLYCVYVAIGQKRSTVAQLVQIISEADALEYSIAVAATASDPAPLQFMAPYSG 179

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + EYF   G + L+I D +++ A + R+++      P    +P  VF    R LER  
Sbjct: 180 CAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRPLERAA 239

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   S
Sbjct: 240 KRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLS 299

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           VSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 300 VSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 343


>gi|269914683|gb|ACJ06633.2| mitochondrial F1-ATPase beta subunit [Dimocarpus longan]
          Length = 558

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 182/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEEIS 82
           G +S +      V        +   +     N   + +V   +  ++V    +   E + 
Sbjct: 88  GQVSQVIGAVVDVRFHEGLPPILTALEVMDHNVRVVLEVASHLGENMVRTIAMDGTEGLV 147

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G    +       GR++N +G+PID      K D  + I  + P  + +   
Sbjct: 148 RGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGEF-KTDHYLPIHREAPAFVEQATE 206

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 207 QQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 266

Query: 199 GREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
            RE  +   + +              K  +V    +E P  R    LT +T+AE+F    
Sbjct: 267 TREGNDLYREMIESGVIKLGDKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAE 326

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT
Sbjct: 327 GQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLSTDLGGLQERI--TTTKKGSIT 384

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SA 367
           +V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+        
Sbjct: 385 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPNILGE 444

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +      ++  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 445 EHYNTARAVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 496


>gi|20467381|gb|AAL27821.1| ATPase beta subunit [Ephedra fragilis]
          Length = 447

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 23  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
            +GK+ L+     +       +S+ G   +R RE  +   +               K  +
Sbjct: 142 XVGKTVLIMELINNIAKAHGGVSVFGGVGKRTREGNDLYMEMKESGVINEKNIIESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|46391135|gb|AAS90662.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
 gi|53981744|gb|AAV25021.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
          Length = 398

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 100/360 (27%), Positives = 162/360 (45%), Gaps = 18/360 (5%)

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +  S    GR+ N LG+P+D    +     +  I    P
Sbjct: 1   MSATDGLMRGMEVIDTGAPLSVPVSGATLGRIFNVLGEPVDNLGPVDTS-ATFPIHRSAP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+ GI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 60  AFIELDTKLSIFENGIKVVDLLAPYRRGGKIGLFGGAGVGKTGLIMELINNIAKAHGGVS 119

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 120 VFGGVGERTREGNDLYMEMKESGVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMA 179

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +++I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 180 EYFRDVNKQDVLLFINNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 237

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 238 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 297

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 298 QPRIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 356


>gi|169142798|ref|YP_001687223.1| ATP synthase CF1 beta subunit [Aneura mirabilis]
 gi|190358252|sp|B0YPN7|ATPB_ANEMR RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|153973824|gb|ABS54484.1| ATP synthase CF1 beta subunit [Aneura mirabilis]
          Length = 492

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 183/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + ++ +G+NS   GQ I +  ++        V    
Sbjct: 19  GSITQIIGPVLDIVFSPGKMPNIYNSLIVRGQNSA--GQEINVTCEVQQLLGNNEVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               + +     V   G    +       GR+ N LG+ +D    +  G L+  I    P
Sbjct: 77  TSATDGLMREMEVLDTGAPSSVPVGEATLGRIFNVLGEAVDNLGPVDAG-LTSPIHRAAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 SFIQLDTKLSIFETGIKVVDLLVPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R     TA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESKVINEQNIAESKVALVYGQMNEPPGARMRVGSTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 374 QPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARRIERFLSQP 432


>gi|5031151|gb|AAD38086.1|AF093425_1 ATP synthase beta subunit [Drimys winteri]
          Length = 494

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQQIYVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVHGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G            V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTSQRYKELQDIIGILGSDELSXED-RLTVARARKIERFLSQP 430


>gi|302747418|gb|ADL63190.1| Atp1 [Cucurbita pepo]
          Length = 349

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 151/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  ++R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIISRKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYL-GD 212
            +      GK+ +      +                 +   +G++   V + ++    G+
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSSGN 177

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|188587434|ref|YP_001918979.1| ATP synthase F1, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179352121|gb|ACB86391.1| ATP synthase F1, beta subunit [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 475

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 106/363 (29%), Positives = 177/363 (48%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +G  + I  G   +  G    +       GRV N  G  IDG   + +G+
Sbjct: 62  LGDEVVRCIAMGSTDGIVRGMEAYDTGQPITVPVGRSTLGRVFNITGDTIDGQGEV-EGE 120

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   +++   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R
Sbjct: 121 DYYPIHRDSPKFEDQETSTEILETGIKVLDLLVPYARGGKIGLFGGAGVGKTVLIQELIR 180

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +  ++     + S VGER RE  + + +      + K+ +V    +E P  R    LT +
Sbjct: 181 NIAYEHGGFSVFSGVGERTREGNDLVLEMSESGVIDKTALVFGQMNEPPGARMRVGLTGL 240

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  + +E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 241 TMAEYFRDNEGQDVLLFIDNIFRFTQAGQEVSALMGRMPSAVGYQPTLQTEMGELQERI- 299

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG++T++ ++ V  D+  DP   +  + LD    L RS+AE G YP VDPL S S
Sbjct: 300 -TSTKKGSVTSIQAIYVPADDPTDPAPATTFAHLDASTYLERSIAEMGIYPAVDPLVSSS 358

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +   +   +  ++ R++E +DI  I G     D      V +   I  FL
Sbjct: 359 RILDPQIVGQEHYDVARGVQQVLQRYKELQDIIAILGMDELSDED-KLTVSRARKIQRFL 417

Query: 418 KQS 420
            Q 
Sbjct: 418 SQP 420


>gi|149798707|gb|ABR32044.1| ATP synthase beta chain [Notholaena aschenborniana]
          Length = 426

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|42558328|gb|AAS19873.1| ATP synthase beta chain [Ctenopteris nutans]
          Length = 422

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|242620112|ref|YP_003002116.1| ATP synthase CF1 beta chain [Aureococcus anophagefferens]
 gi|239997357|gb|ACS36880.1| ATP synthase CF1 beta chain [Aureococcus anophagefferens]
          Length = 475

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 106/419 (25%), Positives = 182/419 (43%), Gaps = 21/419 (5%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI-VYICPV 75
           +    G ++ I      +   S  +        +     +  + +V ++  D  V    +
Sbjct: 4   VSTNVGNVTQIIGPVLDIEFTSGKLPKVYNAIDITMASGAVVVCEVQQLLGDNKVRAVSM 63

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G      G    +   A   GR+ N LG+P+D    +   + ++ I    P 
Sbjct: 64  SSTDGMKRGIEAVDTGSPISVPVGAPTLGRIFNILGQPVDEMGPVDSSE-TLPIHRDAPA 122

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
               +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 123 FTELETKPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSV 182

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +     +E P  R    LTA+T+AE
Sbjct: 183 FGGVGERTREGNDLYMEMKESGVINENNLPESKVALCYGQMNEPPGARMRIGLTALTMAE 242

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 243 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TST 300

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +  
Sbjct: 301 TQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQ 360

Query: 363 KAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                D       ++  ++ +++E +DI  I G     +     AV +   I  FL Q 
Sbjct: 361 PEIVGDTHYDTAQNVKKILQKYKELQDIIAILGIDELSEDD-KLAVARARKIERFLSQP 418


>gi|133917172|emb|CAJ33227.1| ATP synthase alpha subunit [Lactobacillus gasseri]
          Length = 367

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 152/352 (43%), Gaps = 10/352 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGD 116
           + G    +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG 
Sbjct: 20  SYGIAQNLEANDVGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGL 79

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + K D +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ 
Sbjct: 80  GEI-KTDKTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTA 138

Query: 177 LLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           L      +        I   +G++   V+  +E       +  ++VV A   E   +  +
Sbjct: 139 LALDTIINQKGQDVICIYVAIGQKESTVKNSVETLKRFGAMDYTIVVEAGPSEPAPMLYI 198

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + REI+      P    YP  VF    RL
Sbjct: 199 APYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRL 258

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 259 LERSAKLNKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAI 318

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           +   SVSR+   A     KK+  +L   +  + E       G     +D   
Sbjct: 319 NAGESVSRVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQAT 367


>gi|302747688|gb|ADL63325.1| Atp1 [Vahlia capensis]
          Length = 349

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAVGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|113954817|ref|YP_731481.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9311]
 gi|123031607|sp|Q0I7U1|ATPB_SYNS3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|113882168|gb|ABI47126.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9311]
          Length = 487

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 189/420 (45%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G +  +      V   +  +  + + +  +G N+   G+ I +  ++        V    
Sbjct: 13  GVVRQVIGPVLDVEFPAGKLPKILNALRIEGTNTA--GEAIGLTAEVQQLLGDHRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G      G    +       GR+ N LG+P+D    +   +++  I  + P
Sbjct: 71  MSGTDGLVRGMEALDTGSPIAVPVGEATLGRIFNVLGEPVDEQGPVN-TNVTSPIHREAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                +   K F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   +S
Sbjct: 130 KLTELETKPKVFETGIKVIDLLAPYRQGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  E++              K  +     +E P  R    L+A+T+A
Sbjct: 190 VFGGVGERTREGNDLYEEFKESGVINADDLSKSKVALCYGQMNEPPGARMRVGLSALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ER+    
Sbjct: 250 EHFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERVA--S 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LD   VLNR+LA +G YP VDPL S S + 
Sbjct: 308 TLEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRALASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             A   D   +   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 QPAVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD-RQTVDRARKIEKFLSQP 426


>gi|19033077|gb|AAL83523.1|AF408795_1 ATP synthase beta subunit [Cosmocladium perissum]
          Length = 402

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNRVRAVAMSATDGLMRGMEVLDTGGPLSVPVGEVTLGRIFNVLGEPVDEMGPVN-VT 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGAEHYDTAQGVKKTLQRYKELQDIIAILGLDELSEDD-RLVVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|99640685|emb|CAJ45107.1| putative beta subunit of chloroplast ATP synthase [Lygodium
           japonicum]
          Length = 493

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 187/428 (43%), Gaps = 29/428 (6%)

Query: 16  SKNLVVQGGYISSITSVYYTV-TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI----- 69
           S  +    GYI+ I      V +   +   + + +V +G+N+   GQ I +  ++     
Sbjct: 11  SNLMEKNVGYITQIIGPVLDVASAPDKMPNIYNSLVVRGQNAA--GQEINVTREVQQLLG 68

Query: 70  ---VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLS 125
              V    +   + ++ G  V   G    +       GR+ N LG+P+D    + +G  +
Sbjct: 69  NNEVRAVAMSATDGLTRGMGVTDTGAPLSVPVGEITLGRIFNVLGEPVDNLGPV-EGGTT 127

Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185
             I    P           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     + 
Sbjct: 128 FPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELINNI 187

Query: 186 CFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMA 234
                 +S+ G   ER RE  +   +               K  +V    +E P  R   
Sbjct: 188 AKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNVSESKVALVYGQMNEPPGARMRV 247

Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
            LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L
Sbjct: 248 GLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSL 307

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  ++G+IT++ +V V  D+  DP   +  +  D   VL+R LA +G YP VDP
Sbjct: 308 QERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHSDATTVLSRGLAAKGIYPAVDP 365

Query: 354 LASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S +        +  +    +   + R++E +DI  I G     +      V +   
Sbjct: 366 LDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDESSEDD-RLTVARARK 424

Query: 413 IYDFLKQS 420
           I  F  Q 
Sbjct: 425 IERFSSQP 432


>gi|42558406|gb|AAS19912.1| ATP synthase beta chain [Terpsichore hanekeana]
          Length = 422

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRNSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|7708462|emb|CAB89922.1| ATP synthase beta subunit [Kibara coriacea]
          Length = 491

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I  I      V     +   + + +V  G   D +GQ I +  ++        V    
Sbjct: 19  GRIVQIIGPVXDVAFPPGKMXNIYNALVVXG--RDTVGQQINVTCEVQQLLGNNRVRAVA 76

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 77  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 135

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 136 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 195

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 196 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVHGQMNEPPGARMRVGLTALTMA 255

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 256 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 313

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 314 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 373

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +   L Q 
Sbjct: 374 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLPVARARKMERSLSQP 432


>gi|302747320|gb|ADL63141.1| Atp1 [Actinidia arguta]
          Length = 349

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTYIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|56551137|ref|YP_161976.1| F0F1 ATP synthase subunit beta [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|81820933|sp|Q5NQY9|ATPB_ZYMMO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56542711|gb|AAV88865.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 484

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 24/417 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V    +   L   +  + +++  + +V   +  ++V    +   + + 
Sbjct: 11  GRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLV 70

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   R+       GR++N +G+P+D    +G    +M I +  PP   +   
Sbjct: 71  RGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIG-SKQTMPIHADAPPFTEQSTD 129

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 130 TAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGER 189

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   ++L   +              K  +V    +E P  R    L+ +T+AEYF
Sbjct: 190 TREGNDLYHEFLEAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYF 249

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  +K
Sbjct: 250 RDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKK 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADK 363
           G+IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR L  +
Sbjct: 308 GSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPR 367

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +  ++ R++  +DI  I G     +    K V +   I  FL Q 
Sbjct: 368 IVGDEHYQTARDVQEILQRYKNLQDIIAILGMDELSEDD-RKVVGRARRIQRFLSQP 423


>gi|302747382|gb|ADL63172.1| Atp1 [Caulophyllum thalictroides]
          Length = 349

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++  +SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|283975502|gb|ADB55725.1| ATP synthase beta chain [Pseudozyma flocculosa]
          Length = 414

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/375 (29%), Positives = 179/375 (47%), Gaps = 19/375 (5%)

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G   +I       GR++N +G+P+D    + KG+    I  + P
Sbjct: 1   MEGTEGLIRGQKVLDTGLPIQIPVGPGTLGRIMNVIGEPMDERGPI-KGNKLSPIHVEPP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +++    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        S
Sbjct: 60  AFVDQSTTAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYS 119

Query: 194 L---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +   VGER RE  +   + +       +   K  +V    +E P  R    LT +TIAEY
Sbjct: 120 VFTGVGERTREGNDLYHEMIETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEY 179

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E +   G +P A GY  ++ +++  + ERI  +  +
Sbjct: 180 FRDEEGQDVLLFIDNIFRFTQAGSETSALLGRIPSAVGYQPTLATDMGVMQERI--TTTK 237

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D 
Sbjct: 238 KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDP 297

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           A    +   + + +  L+  ++  +DI  I G     +      V +   I  F+ Q   
Sbjct: 298 AIVGREHYDIATGVQKLLQDYKSLQDIIAILGMDELSEED-KLTVERARKIQRFMSQP-- 354

Query: 423 DLSSEDVFQEITKKL 437
             +   VF  I  KL
Sbjct: 355 -FAVAQVFTGIEGKL 368


>gi|220927730|ref|YP_002504639.1| F0F1 ATP synthase subunit beta [Clostridium cellulolyticum H10]
 gi|254808141|sp|B8I579|ATPB_CLOCE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|219998058|gb|ACL74659.1| ATP synthase F1, beta subunit [Clostridium cellulolyticum H10]
          Length = 465

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/408 (25%), Positives = 183/408 (44%), Gaps = 13/408 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGE 79
             G I  +      +   +  +  + + +     +     +V++ +  D V    +   +
Sbjct: 4   SSGVIVQVIGPVLDIRFENGILPDIYNAIKIPADSGTVTAEVMQHLGNDTVRCVAMSSTD 63

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G      G    +       GR+ N LG+P+D    +      + I  + P    +
Sbjct: 64  GLVRGMKAEDTGDAITVPVGKEVLGRIFNVLGEPVDKAGPVEPT-AYLPIHREAPSLEEQ 122

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195
           +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +    S+   V
Sbjct: 123 RPSTEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSIFTGV 182

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVL 253
           GER RE  +   D      ++K+ +V    +E P  R    LT +T+AEYF  +   +VL
Sbjct: 183 GERTREGNDLWHDMNDSGVIEKTAMVFGQMNEPPGARMRVGLTGLTMAEYFRDQMGQDVL 242

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +++  L ERI      KG+IT+V +V
Sbjct: 243 LFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLATDVGALQERIA--STNKGSITSVQAV 300

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372
            V  D+  DP   +  + LD   VL+R +   G YP VDPL S SR+ D      +   +
Sbjct: 301 YVPADDLTDPAPATTFAHLDATTVLSRDIVAMGIYPAVDPLESTSRILDPKVVGEEHYTI 360

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++ R +E +DI  I G     +      V +   I  +L Q 
Sbjct: 361 ARKVQEILQRNKELQDIIAILGMDELPEED-KLTVFRARKIQRYLSQP 407


>gi|332992891|gb|AEF02946.1| F0F1 ATP synthase subunit alpha [Alteromonas sp. SN2]
          Length = 522

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/428 (25%), Positives = 190/428 (44%), Gaps = 15/428 (3%)

Query: 2   QKNLETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           Q     L  + E +  ++ +Q  G + S+++    V+ L       + ++      D  G
Sbjct: 14  QYVFNQLEYIRESHIPDVSLQEMGTVESVSAGIAIVSGL-FGAGFEELLLFPN---DIYG 69

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119
               I+   + +  +G    +  GD V   GR   I+      GRVI+ LG  +D   ++
Sbjct: 70  IAFNIDEHEIGVIMLGDYTALHAGDEVKRTGRVMDIAVGNGLIGRVIDPLGNALDAKGNI 129

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL- 178
              +    I    P  M+R  V +  +TG++ +D   P+  GQR  +      GK+ +  
Sbjct: 130 VTRE-RFPIERPAPDIMSRSPVTEPLQTGVKALDALLPIGRGQRELILGDRQTGKTAIAI 188

Query: 179 -SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATS-DESPILRKMAPL 236
            ++  + D     +   +G++   V + I     ++  +  VV+ T  ++ P L  +AP 
Sbjct: 189 DTILNQKDKNVLCVYCAIGQKSASVAKTITTLQRNSAMEYTVVMVTEGNDPPGLDYIAPY 248

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAEYF+ +G +VL++ D +T+ A S RE++      P    +P  +F    RLLER
Sbjct: 249 AATSIAEYFTQQGKDVLIVYDDLTQHARSYRELSLLLRRPPGREAFPGDIFYLHSRLLER 308

Query: 297 IGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                +    G++TA+  +  +  N +  I  ++ SI DG I L+ +L   G  P +D  
Sbjct: 309 STHLNEALGGGSLTALPIIETEEQNMSAYIPTNLISITDGQIYLSPTLFSLGVLPAIDVG 368

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+  KA     +K+  +L     +FEE        G R   D +L  A+     I 
Sbjct: 369 KSVSRVGGKAQKPAFRKVSGALKLAYAQFEELETF-ARFGARLDSDSLL--AIEHGLRIR 425

Query: 415 DFLKQSPS 422
             +KQ+ S
Sbjct: 426 ACMKQAES 433


>gi|304407760|ref|ZP_07389411.1| ATP synthase F1, beta subunit [Paenibacillus curdlanolyticus YK9]
 gi|304343243|gb|EFM09086.1| ATP synthase F1, beta subunit [Paenibacillus curdlanolyticus YK9]
          Length = 468

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/415 (25%), Positives = 191/415 (46%), Gaps = 20/415 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDI--------VYICP 74
           G +  +      +   + ++      +   K + N G+V I + +++        V    
Sbjct: 4   GRVVQVMGPVVDIAFDNGHLPEILNAIKIEKKAQNPGEVDINLTVEVATHLGDNLVRCVA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G      G    +       GRV N LG PID + ++ +  ++  I  + P
Sbjct: 64  MSTTDGLVRGTEAVDQGAPITVPVGPATLGRVFNVLGDPIDNNGAVDRS-IANPIHRQAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
                   ++  +TGI+VID+  P   G +IG+F G+G+GK+  +     +   +     
Sbjct: 123 EFEELSTQQEMLETGIKVIDLMAPYAKGGKIGLFGGAGVGKTVTMQELINNIAQEHGGIS 182

Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF    
Sbjct: 183 VFAGVGERTREGNDLYHEMSDSGVIAKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDVE 242

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 243 GRDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 300

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SA 367
           ++ ++ V  D++ DP   +  + LD    L R++A  G +P VDPLAS SR+        
Sbjct: 301 SIQAIYVPADDYTDPAPATAFAHLDATTNLERNIAAMGIFPAVDPLASSSRILTPEILGE 360

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +  ++  S+  ++ R++E  DI  I G     +      V +   I +FL Q   
Sbjct: 361 EHYQVAQSVKKILQRYKELLDIIAILGMDELSEED-KLTVLRARRIQNFLSQPLH 414


>gi|149798727|gb|ABR32054.1| ATP synthase beta chain [Pteris arborea]
          Length = 426

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGESTLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|89574037|gb|ABD77244.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
           [Felis catus]
          Length = 418

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 106/384 (27%), Positives = 180/384 (46%), Gaps = 18/384 (4%)

Query: 51  HQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINA 108
            QG+++  + +V   +    V    +   E +  G  V   G   +I       GR++N 
Sbjct: 1   VQGRDTRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNV 60

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+PID    + K      I ++ P  M     ++   TGI+V+D+  P   G +IG+F 
Sbjct: 61  IGEPIDERGPI-KTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFG 119

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSV 218
           G+G+GK+ L+     +         + + VGER RE  +   + +        D   K  
Sbjct: 120 GAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVA 179

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P
Sbjct: 180 LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 239

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   V
Sbjct: 240 SAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTV 297

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R++AE G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G  
Sbjct: 298 LSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILGMD 357

Query: 397 PGVDLILDKAVHQVPIIYDFLKQS 420
              +      V +   I  FL Q 
Sbjct: 358 ELSEED-KLTVSRARKIQRFLSQP 380


>gi|42558394|gb|AAS19906.1| ATP synthase beta chain [Scleroglossum sulcatum]
 gi|42558396|gb|AAS19907.1| ATP synthase beta chain [Scleroglossum sulcatum]
          Length = 422

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|110915698|gb|ABH02637.1| ATP synthase beta subunit [Sesleria caerulea]
          Length = 471

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 165/379 (43%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG+P+D
Sbjct: 33  NVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVD 92

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 93  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 151

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 152 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 211

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 212 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 271

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG+IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 272 QPTLSTEMGSLQERIA--STKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGL 329

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +        + R++E +D   I G     + 
Sbjct: 330 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRXKETLQRYKELQDXIAILGLDELSEE 389

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I   L Q 
Sbjct: 390 D-RLTVARARKIERXLSQP 407


>gi|113910784|gb|ABI48124.1| ATPase beta subunit [Calypogeia muelleriana]
          Length = 472

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 179/418 (42%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      V     +   + + ++ QG+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVAFPPGKMPNIYNSLIVQGQNAA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMEVIDTGAPSSVPVGEATLGRIFNVLGEPVDSLGPVDAS-TTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K   V    +E P  R    LTA T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEQNISESKVASVYGQMNEPPGARMRVGLTAPTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++ + G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDINKQDVLLFIDNIFRFVQAGSEVSASLGRMPSAVGYQPTLATEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   V +R LA +G YP VDP  S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVSSRGLAAKGIYPAVDPSDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|146286055|sp|A2RMI2|ATPB_LACLM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|6048355|gb|AAF02210.1| H+-ATPase cytoplasmic F1-part beta-subunit [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|15963437|dbj|BAB69471.1| H+-ATPase beta subunit [Lactococcus lactis subsp. lactis]
 gi|300071522|gb|ADJ60922.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 469

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 112/415 (26%), Positives = 187/415 (45%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNS----DNLGQVIRINLDIVYI 72
           +  G I+ +      V        L +     +V++  N       L   + +    V  
Sbjct: 1   MSSGKITQVIGPVVDVE-FGSDAKLPEINNALIVYKDVNGLKTKITLEVALELGDGAVRT 59

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GRV N LG  IDG +          I  K
Sbjct: 60  IAMESTDGLTRGLEVLDTGKAVSVPVGESTLGRVFNVLGDVIDGGEDFPADAERNPIHKK 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P         +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +   
Sbjct: 120 APTFDELSTANEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGG 179

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF  
Sbjct: 180 ISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+
Sbjct: 240 VQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           +T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR L  +  
Sbjct: 298 VTSIQAIYVPADDYTDPAPATAFAHLDATTNLERRLTQMGIYPAVDPLASSSRALTPEIV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q+
Sbjct: 358 GEEHYEVAMEVQRVLQRYKELQDIIAILGMDELSDDE-KILVGRARRIQFFLSQN 411


>gi|116629873|ref|YP_815045.1| F0F1 ATP synthase subunit beta [Lactobacillus gasseri ATCC 33323]
 gi|238853684|ref|ZP_04644052.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 202-4]
 gi|282851612|ref|ZP_06260977.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 224-1]
 gi|311110490|ref|ZP_07711887.1| ATP synthase F1, beta subunit [Lactobacillus gasseri MV-22]
 gi|122273189|sp|Q042L5|ATPB_LACGA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116095455|gb|ABJ60607.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus gasseri ATCC
           33323]
 gi|238833722|gb|EEQ25991.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 202-4]
 gi|282557580|gb|EFB63177.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 224-1]
 gi|311065644|gb|EFQ45984.1| ATP synthase F1, beta subunit [Lactobacillus gasseri MV-22]
          Length = 480

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 119/410 (29%), Positives = 193/410 (47%), Gaps = 18/410 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD----IVYICPVGI 77
           G I  +      V   L + +  + + +     N D L  V+ + L+    ++    +  
Sbjct: 4   GEIVQVIGPVVDVEFPLDKDLPDINNALRVTNNNGDTL--VLEVTLELGDGVLRTISMES 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG PIDG  +LGK      I  + P   
Sbjct: 62  TDGLRRGMEVEDTGAPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKREGIHKEAPKYD 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                E+  +TGI+VID+  P   G ++G+F G+G+GK+T++     +   +   IS+  
Sbjct: 122 ELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFT 181

Query: 195 -VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +     +  K+ +V    +E P  R    LT +TIAEYF      +
Sbjct: 182 GVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLD 241

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ 
Sbjct: 242 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQ 299

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D++ DP   +  + LD    L R L E+G YP VDPL S S   D      +  
Sbjct: 300 AVYVPADDYTDPAPATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHY 359

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   + H++ R++E +DI  + G     D      V +   I  FL Q+
Sbjct: 360 QVAVQVQHILQRYQELQDIISVLGMDELSDDE-KLIVERARKIQFFLSQN 408


>gi|148787939|gb|ABR12219.1| ATP synthase beta subunit [Tradescantia ohiensis]
          Length = 427

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 165/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    ++ 
Sbjct: 2   NRVRAIAMSATDGLMRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVDDLGPVD-TRITS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  ++   +     R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|302747570|gb|ADL63266.1| Atp1 [Paeonia sp. Qiu 95090]
          Length = 349

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|319760158|ref|YP_004124096.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF]
 gi|318038872|gb|ADV33422.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF]
          Length = 467

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 115/415 (27%), Positives = 186/415 (44%), Gaps = 17/415 (4%)

Query: 19  LVVQGGYISSITSVYYTVTCLSQYVC----LGDFVVHQG--KNSDNLGQV-IRINLDIVY 71
           + V  G I  I      V      V       +  V+         + +V  ++   +V 
Sbjct: 1   MSVSVGKIIQIIGAVVDVEFNQNEVPNLYHALEVCVNNNLKNEKKIILEVEQQLGGGVVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +G  + +  G +V +  R   +       GR++N LG+PID   S+   +    I  
Sbjct: 61  CIAMGSTDGLCRGLIVGNLKRCIEVPVGKETLGRIMNVLGEPIDKKGSIKTIE-RRSIHQ 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P        ++   TGI+VID+  P   G +IG+F G+G+GK+  +    R+   +  
Sbjct: 120 FSPLYHELSTNQELLVTGIKVIDLMCPFIKGGKIGLFGGAGVGKTVNIMELIRNIAVEHS 179

Query: 191 ---IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              +   VGER RE  +F  +    D + K  +V    +E P  R    LT +TIAE F 
Sbjct: 180 GYSVFVGVGERTREGNDFYHEMIHSDIINKVALVYGQMNEPPGNRFRVALTGLTIAEKFR 239

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
             G NVLL +D+I R+  +  E++   G +P A GY +++  E+  L ERI     + G 
Sbjct: 240 DDGYNVLLFIDNIYRYTLAGTEVSALLGRVPSAVGYQSTLSEEMGMLQERIA--STKSGA 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V ++ V  D+  DP   +  + LD  IVL+R +A  G YP VDPL S S+  D    
Sbjct: 298 ITSVQAIYVPADDLTDPSPTTTFAHLDATIVLSRQIAALGIYPAVDPLDSHSQQLDPFIV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + +++  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 GQEHYDVANAVRSILQRYQELKDIIAILGMDELSESD-KLIVLRSRKIQRFLSQP 411


>gi|206603286|gb|EDZ39766.1| ATP synthase F1, beta subunit [Leptospirillum sp. Group II '5-way
           CG']
          Length = 463

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/408 (26%), Positives = 188/408 (46%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           ++ G I  +      V      V  +   ++ +G +     Q  +I   +V    +   +
Sbjct: 1   METGEIIQVIGPVVDVRFPEGSVPDIYAALIVEGNDIILETQ-QQIGEGVVRSIAMSTTD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR+++ LG P+D    +   +    I  + P     
Sbjct: 60  GLVRGMKVKNTGSPIQVPVGQSVLGRMMDVLGNPVDEAGPI-TAEARRSIHREPPGFEEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               + F+TGI+V+D+  P   G + G+F G+G+GK+ ++    R+   +     + + V
Sbjct: 119 ASATEVFETGIKVVDLIAPFAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +   +      + K+ +V    +E P +R    LT +T AEYF  +    + 
Sbjct: 179 GERTREGNDLWNEMKESKVIDKTSLVYGQMNEPPGVRLRVALTGLTQAEYFRDEERRDVL 238

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I RF  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V
Sbjct: 239 FFIDNIFRFTLAGAEVSALLGRMPSAVGYQPTLAVEMGGLQERI--TSTKKGSITSVQAV 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-L 372
            V  D+  DP   +  S LD  +VL+R +AE G YP VDPL S SR+ D     DE   +
Sbjct: 297 YVPADDLTDPAPATTFSHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPMIVGDEHYGV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   + ++++ +DI  I G     D    + V +   I  FL Q 
Sbjct: 357 ARAVQKTLQKYKDLQDIIAILGMDELSDDD-KRIVGRARRIQRFLSQP 403


>gi|42559050|gb|AAS20211.1| ATP synthase beta subunit [Tripladenia cunninghamii]
          Length = 444

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 3   GQQINVTCEVQQLLGNNRVRAVXMSATDGLTRGMEVIDTGAPXSVPVGGATXGRIFNVLG 62

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 63  EPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 121

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 122 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITDSKVAL 181

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 182 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 241

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 242 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 299

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +     R++E +DI  I G   
Sbjct: 300 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDE 359

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 360 LSEED-RLTVARARKIERFLSQP 381


>gi|179183906|gb|ACB78129.1| ATPase [Vibrio breoganii]
          Length = 404

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/402 (23%), Positives = 169/402 (42%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L++ V  G+ +   G         + +  D V    +G   ++  G  V   GR   +
Sbjct: 3   HGLAE-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPFADLQEGMKVTGTGRILEV 58

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 59  PVGPELLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 117

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 118 IPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEESG 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               ++VVVA++ ES  L+ +A      + EYF  +G++ L+I D +++ A + R+I+  
Sbjct: 178 ALANTIVVVASASESAALQYLARYAGCAMGEYFRDRGEDALIIYDDVSKQAVAYRQISLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 238 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGD 297

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 298 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 357

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 358 LAQYRE---LAAFAQFSSDLDETTKKQLDHGAKVTELMKQKQ 396


>gi|284053202|ref|ZP_06383412.1| F0F1 ATP synthase subunit beta [Arthrospira platensis str. Paraca]
          Length = 485

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 190/418 (45%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           GYI+ +      +     +   + + +   GKN        + +V ++  D  V    + 
Sbjct: 11  GYITQVIGPVVDIKFPDGKLPEIYNALKISGKNEAGQEISVVCEVQQLLGDNQVRSVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      GR  ++   +   GR+ N +G+PID    +   D +  I    P  
Sbjct: 71  GTDGLVRGMEATDSGRAIQVPVGSGTLGRIFNVVGEPIDNLGPV-PNDETSSIHRPAPAF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++ +     F+TGI+V+D+  P   G +IG+F G+G+GK+ ++     +       +S+ 
Sbjct: 130 VDLETSPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   + +             K  +V    +E P  R    L+A+T+AEY
Sbjct: 190 GGVGERTREGNDLYNEMIESGVINKEDLPQSKVALVYGQMNEPPGARMRVALSALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDVSKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALASKGIYPAVDPLDSSSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 SVVGEEHYQTARAVQSTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLSQP 424


>gi|119350441|gb|ABL63171.1| AtpB [Actinastrum hantzschii]
          Length = 392

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 5   VRAVAMSATDGLMRGMEVVDSGKPLNVPVGQTTLGRIFNVLGEPVDNLGPVNNNEQ-LPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESGVINESNLSESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|33592499|ref|NP_880143.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama
           I]
 gi|33572145|emb|CAE41689.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama
           I]
 gi|332381917|gb|AEE66764.1| flagellum-specific ATP synthase FliI [Bordetella pertussis CS]
          Length = 477

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 151/457 (33%), Positives = 233/457 (50%), Gaps = 31/457 (6%)

Query: 12  AEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIV 70
               S    +  G I+    +    T L   V     + + +G +     +V+  +   +
Sbjct: 16  IRAASTEPWLVSGRITRAAGLVLHTTGLRLPVGAACRIELARGHDHWADAEVVGFDGHTL 75

Query: 71  YICPVGIGEEISLGDLVFHWGRFR-----------------------ISPSACWCGRVIN 107
           Y+ P      +  G  V                              +       GRV++
Sbjct: 76  YLMPQSDISGLPPGARVVPAEPAVQRPVPLPRKAELNGNAKPQVGRHLPVGNAMLGRVVD 135

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
             G+P+DG   L   + +  + +     ++R  ++     G+R I+    +  GQR+G+F
Sbjct: 136 GAGRPLDGLGPLAGAEQA-PLTALPINPLSRAPIDSVLDVGVRAINGLLTVGRGQRMGLF 194

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226
           AGSG+GKS LL M AR    D +++ L+GERGREV+EFIE  LG + L +SVVV A +D 
Sbjct: 195 AGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSVVVAAPADV 254

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
           SP+LR      A  +AE+F  +G +VLLI+DS+TRFA + REIA   GE P  +GYP SV
Sbjct: 255 SPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPATKGYPPSV 314

Query: 287 FSELPRLLERIGPS----EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
           F++LP L+ER G        + G+ITA  +VL +GD+  DPIADS R+ILDGH+VL+R L
Sbjct: 315 FAKLPALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHL 374

Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
           AE G YP +D  AS+SR      + ++ + V     ++ R++  RD+  +G Y  G D  
Sbjct: 375 AEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGAYVAGADPQ 434

Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDV-FQEITKKLQ 438
           LD A+ + P +  +L+Q+  D         ++ + L+
Sbjct: 435 LDDAIARYPRLEAYLQQNIGDSVDYGTAIDQLQRSLE 471


>gi|317495894|ref|ZP_07954257.1| ATP synthase F1 [Gemella moribillum M424]
 gi|316914071|gb|EFV35554.1| ATP synthase F1 [Gemella moribillum M424]
          Length = 471

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 52  QGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINAL 109
            GK    + +V + I  ++V    +   + ++ G  V   G    +       GRV N L
Sbjct: 38  DGKKEKLVLEVSLEIGDNVVRTIAMSSTDGLNRGAEVVDTGAPITVPVGNYTLGRVFNVL 97

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+ +D  +  G       I  + P         +  +TGI+VID+  P   G +IG+F G
Sbjct: 98  GEAVDHGEEAGAEVQKESIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIKGGKIGLFGG 157

Query: 170 SGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           +G+GK+ L+     +         + + VGER RE  +   +      + K+ +V    +
Sbjct: 158 AGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINKTAMVFGQMN 217

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 218 EPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP 277

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +E+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R+L E
Sbjct: 278 TLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERALTE 335

Query: 345 EGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPLAS SR LA +    +  K+ +++   + ++ E +DI  I G     D   
Sbjct: 336 MGIYPAVDPLASTSRALAPEIVGEEHYKVATTIQRTLQKYRELQDIIAILGMDELSDED- 394

Query: 404 DKAVHQVPIIYDFLKQS 420
            K V +   +  FL Q+
Sbjct: 395 KKTVDRARRVQFFLSQN 411


>gi|290969223|ref|ZP_06560748.1| ATP synthase F1, beta subunit [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780729|gb|EFD93332.1| ATP synthase F1, beta subunit [Megasphaera genomosp. type_1 str.
           28L]
          Length = 472

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 189/411 (45%), Gaps = 17/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNS----DNLGQVIR-INLDIVYICPVG 76
           G +  +      V   S+     + + +   G N     D + +V++ +  D+V    + 
Sbjct: 6   GKVVQVIGPVIDVRFASEADLPAIYNAIHITGGNGAQAVDLITEVMQHLGDDVVRCVAMS 65

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + I  G      G   ++       GR+ N LG+ +D  D+  + +    I    P  
Sbjct: 66  STDGIVRGMDAEDTGSPIKVPVGKGVLGRIFNVLGQAVDKVDAKVEAEAYWPIHRPAPKF 125

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             +    +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+ 
Sbjct: 126 DEQATGTEILETGIKVVDLIAPYSKGGKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVF 185

Query: 195 --VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250
             VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF   +  
Sbjct: 186 TGVGERTREGNDLWNEMKESGVISKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDKEHQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT+V
Sbjct: 246 DVLLFIDNIFRFIQAGSEVSALLGRIPSAVGYQPTLGTDVGALQERI--TSTKSGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      D 
Sbjct: 304 QAVYVPADDLTDPAPAATFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPHVIGEDH 363

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   ++  ++ ++ + +DI  I G     +      V +   I  FL Q 
Sbjct: 364 YQTARAVQAILQKYNDLQDIIAILGIDELSEED-KLTVARARKIQRFLSQP 413


>gi|113910920|gb|ABI48192.1| ATPase beta subunit [Helminthostachys zeylanica]
          Length = 468

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V   G    I       GR+ N LG
Sbjct: 30  GQQISVTCEVQQLLGNNKVRAIAMSATDGLTRGMRVTDTGAPLSIPVGEATPGRIFNVLG 89

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +   + S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 90  EPVDDLGPVDASETS-PIHKPAPAFTRLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 148

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 149 GVGKTVLIMESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 208

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +ESP  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 209 VYGQMNESPGARTRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +  D   VL
Sbjct: 269 AVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHPDATTVL 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 327 SRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 386

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 387 LSEED-RLTVARARKIERFLSQP 408


>gi|300870132|ref|YP_003785003.1| F0F1-ATP synthase subunit beta [Brachyspira pilosicoli 95/1000]
 gi|300687831|gb|ADK30502.1| F0F1-ATP synthase, subunit beta [Brachyspira pilosicoli 95/1000]
          Length = 417

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 105/359 (29%), Positives = 175/359 (48%), Gaps = 11/359 (3%)

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + IS GD +   G    +       GR+ N LG+ +D  + + K      
Sbjct: 5   RVRAIALESTDGISRGDEIIDTGNHIMVPVGNETIGRIFNVLGQTVDKGEPI-KAKEYRS 63

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I +  P     +   + F+TGI+VID+  P   G + G+F G+G+GK+ L+     +   
Sbjct: 64  IHANPPKFDALEPKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIAS 123

Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           +     + + VGER RE  +   +      + K+ +V    +E P  R    LTA+T+AE
Sbjct: 124 EHGGYSVFAGVGERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALTALTMAE 183

Query: 244 YFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF    + +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 184 YFRDSANLDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TST 241

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ +V V  D+  DP   +  + LD   VL+R ++E+G YP VDPLAS SR+ D
Sbjct: 242 KHGSITSIQAVYVPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILD 301

Query: 363 KAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  ++   + H++ R+ + +DI  I G     +      V +   I  FL Q 
Sbjct: 302 PIVLGKEHYEVARKVQHILQRYRDLQDIIAILGADELSEDD-KLTVSRARKIEQFLSQP 359


>gi|16127677|ref|NP_422241.1| F0F1 ATP synthase subunit beta [Caulobacter crescentus CB15]
 gi|221236496|ref|YP_002518933.1| F0F1 ATP synthase subunit beta [Caulobacter crescentus NA1000]
 gi|81856162|sp|Q9A2V9|ATPB_CAUCR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|13425165|gb|AAK25409.1| ATP synthase F1, beta subunit [Caulobacter crescentus CB15]
 gi|220965669|gb|ACL97025.1| ATP synthase beta chain [Caulobacter crescentus NA1000]
          Length = 539

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 109/425 (25%), Positives = 184/425 (43%), Gaps = 26/425 (6%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQV-IRINLDIVYICP 74
            L    G +  I      +        + + V  V+       + +V   +    V    
Sbjct: 59  GLEGATGRLVQIIGAVVDIEFDGALPAILNAVETVNTATGQRLVFEVAQHLGQSTVRAIA 118

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G   R+       GR++N +G+PID    + + D+S  I    P
Sbjct: 119 MDATEGLVRGQPVRDTGEPIRVPVGPGTLGRIMNVIGEPIDEQGPI-RSDISRTIHRDAP 177

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               +    +   TGI+VID+  P   G +IG+F G+G+GK+  +     +        S
Sbjct: 178 SFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYS 237

Query: 194 L---VGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLT 237
           +   VGER RE  +   + +  N+              +  +V    +E P  R    LT
Sbjct: 238 VLAGVGERTREGNDLYHEMIESNVNVDPKANNGSTEGSRCALVYGQMNEPPGARARVALT 297

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            ++IAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 298 GLSIAEYFRDEEGKDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQER 357

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R +A +  +P VDPL S
Sbjct: 358 I--TSTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDS 415

Query: 357 VSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            SR+ D     +E   +   +  ++ +++  +DI  I G     +      V +   I  
Sbjct: 416 TSRIMDPLVIGEEHYTVARRVQEVLQQYKALKDIIAILGMDELSEED-KLVVARARKIQR 474

Query: 416 FLKQS 420
           FL Q 
Sbjct: 475 FLSQP 479


>gi|315639292|ref|ZP_07894454.1| ATP synthase F1 sector beta subunit [Campylobacter upsaliensis
           JV21]
 gi|315480618|gb|EFU71260.1| ATP synthase F1 sector beta subunit [Campylobacter upsaliensis
           JV21]
          Length = 465

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 188/409 (45%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQ----GKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +       GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFDDYLPQINEAIRVDFNNDGKEQKLILEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G  V   G    +       GR+ N  G  ID  + +   D    I    P    
Sbjct: 63  DGLVRGLKVEALGSPISVPVGEKVLGRIFNVTGDLIDEGEEISF-DKHWSIHRDPPAFEE 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLVVERARKIEKFLSQP 407


>gi|329767908|ref|ZP_08259421.1| ATP synthase subunit beta [Gemella haemolysans M341]
 gi|328838614|gb|EGF88215.1| ATP synthase subunit beta [Gemella haemolysans M341]
          Length = 471

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 191/411 (46%), Gaps = 17/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC----LGDFVVHQGKNSD--NLGQV-IRINLDIVYICPVG 76
           GYI  +      V   S ++       +  + +G       + +V + I  ++V    + 
Sbjct: 4   GYILQVMGPVVDVKFESGHMPNLLNALEVFIEKGDGKKEKLVLEVSLEIGDNVVRTIAMS 63

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G  V   G    +       GRV N LG+ +D  +  G       I  + P  
Sbjct: 64  STDGLNRGAEVVDTGAPITVPVGNYTLGRVFNVLGEAVDHGEEAGAEVRKDSIHKEAPTF 123

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 124 EELSTHVEVLETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVF 183

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF  +   
Sbjct: 184 TGVGERTREGNDLYYEMKDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQ 243

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ RL ERI  +  +KG++T++
Sbjct: 244 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGRLQERI--TSTKKGSVTSI 301

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADE 369
            ++ V  D++ DP   +  + LD    L RSL E G YP VDPLAS SR LA +    + 
Sbjct: 302 QAIYVPADDYTDPAPATTFAHLDATTNLERSLTEMGIYPAVDPLASTSRALAPEIVGEEH 361

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + +   + ++ E +DI  I G     D    K V +   +  FL Q+
Sbjct: 362 YQVATRIQRTLQKYRELQDIIAILGMDELSDED-KKTVDRARRVQFFLSQN 411


>gi|17224731|gb|AAL37087.1| ATP synthase beta subunit [Dioscorea membranacea]
          Length = 471

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 109/417 (26%), Positives = 178/417 (42%), Gaps = 28/417 (6%)

Query: 26  ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGI 77
           +  I  V   V    +   + + +V +G   D  GQ I +  ++        V    +  
Sbjct: 5   VQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTTGQQINVTCEVQQLLGNNRVRAVAMSA 62

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V        +       GR+ N LG P+D    +     +  I    P  +
Sbjct: 63  TDGLMXGMEVIDTRAPLSVPVGGXTLGRIFNVLGXPVDNLGPVD-TRTTSPIHRSAPAFI 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 122 QLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 181

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 182 GVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYF 241

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++
Sbjct: 242 RDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKE 299

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 300 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPR 359

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 360 IVGEEHYETAQKVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|21956144|dbj|BAC06432.1| ATP synthase beta-subunit [Gonium viridistellatum]
          Length = 376

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVVVSE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|11559350|dbj|BAB18833.1| ATP synthase beta-subunit [Pandorina morum]
          Length = 376

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMDVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|323715428|gb|ADY04782.1| ATP synthase beta subunit [Diplopanax stachyanthus]
          Length = 469

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 171/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++    V   G    +       GR
Sbjct: 30  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRRMEVIDTGAPLSVPVGGATLGR 89

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+ +  P   G +I
Sbjct: 90  IFNVLGEPVDNLGPVD-TRTTSPIHRSAPAFIQLDTKLSIFETGIKVVYLLPPYRRGGKI 148

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 149 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 208

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 209 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 268

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 269 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 326

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  
Sbjct: 327 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIA 386

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 387 ILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|291543824|emb|CBL16933.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus sp. 18P13]
          Length = 465

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 188/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  I      V    +++  L + +      +  + +V   I  D+V    +G  + +
Sbjct: 5   GKIVQIIGAVVDVRFAPEHLPKLLNAIEVDNHGARLVLEVAQHIGDDVVRCIAMGTTDGL 64

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V      R+       GRV N LG+P+D   +  +      I  + P    +  
Sbjct: 65  VRGTDAVDTGSPIRVPVGRETLGRVFNLLGEPVDDKPA-PQVKEHWAIHREAPSYEEQTA 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+   VGE
Sbjct: 124 SSQVLETGIKVIDLIAPYLKGGKIGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGE 183

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      + K+V+V    +E P  R    L+ +T+AEYF  +   +VLL 
Sbjct: 184 RTREGNDLYNEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGLTMAEYFRDQEGQDVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R ++  G YP VDPL S SR+        +  ++  
Sbjct: 302 PADDLTDPAPATTFAHLDATTVLSRQISSLGIYPAVDPLDSTSRILTPEIVGQEHYEVAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++  ++ R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 AVQTILQRYTELQDIIAIMGMDELSEED-KLTVSRARKIQRFLSQP 406


>gi|300361422|ref|ZP_07057599.1| ATP synthase F1 sector beta subunit [Lactobacillus gasseri JV-V03]
 gi|300354041|gb|EFJ69912.1| ATP synthase F1 sector beta subunit [Lactobacillus gasseri JV-V03]
          Length = 480

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 119/410 (29%), Positives = 193/410 (47%), Gaps = 18/410 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD----IVYICPVGI 77
           G I  +      V   L + +  + + +     N D L  V+ + L+    ++    +  
Sbjct: 4   GEIVQVIGPVVDVEFPLDKDLPDINNALRVTNNNGDTL--VLEVTLELGDGVLRTISMES 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG PIDG  +LGK      I  + P   
Sbjct: 62  TDGLRRGMEVEDTGAPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKREGIHKEAPKYD 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                E+  +TGI+VID+  P   G ++G+F G+G+GK+T++     +   +   IS+  
Sbjct: 122 ELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFT 181

Query: 195 -VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +     +  K+ +V    +E P  R    LT +TIAEYF      +
Sbjct: 182 GVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLD 241

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ 
Sbjct: 242 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQ 299

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D++ DP   +  + LD    L R L E+G YP VDPL S S   D      +  
Sbjct: 300 AVYVPADDYTDPAPATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHY 359

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   + H++ R++E +DI  + G     D      V +   I  FL Q+
Sbjct: 360 EVAVQVQHILQRYQELQDIISVLGMDELSDDE-KLIVERARKIQFFLSQN 408


>gi|119350501|gb|ABL63201.1| AtpB [Gloeotila contorta]
          Length = 380

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 102/360 (28%), Positives = 166/360 (46%), Gaps = 18/360 (5%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   GR   +       GR+ N LG+P+D    +   +  + I    P
Sbjct: 1   MSATDGLMRGMEVVDSGRALSVPVGEGTLGRIFNVLGEPVDNLGPVNTKEQ-LPIHRSAP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 60  AFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 119

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 120 VFGGVGERTREGNDLYMEMKESGVINESNISESKVALVYGQMNEPPGARMRVGLTALTMA 179

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 180 EYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TS 237

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S + 
Sbjct: 238 TKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTML 297

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 D   +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 298 QPWIVGDSHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLVVARARKIERFLSQP 356


>gi|21684875|emb|CAD11564.1| ATP synthase beta subunit [Hypolytrum nemorum]
          Length = 487

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 181/414 (43%), Gaps = 28/414 (6%)

Query: 29  ITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEE 80
           I  V   V    +   + + +V QG   D +GQ I +  ++        V    +   + 
Sbjct: 21  IGPVLDVVFPPGKMPNISNALVVQG--RDTVGQQINVTCEVQQLLGNNRVRAVAMSATDG 78

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ G  V   G    +       GR+ N LG+P++    +     S  I    P  +   
Sbjct: 79  LTRGMEVIDTGAALSVPVGGATLGRIFNVLGEPVENLGPVDTSTTS-PIHRSAPAFVQLD 137

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
           +    F+TGI+V+D+  P   G +IG+F G+G+G++ L+     +       +S+ G   
Sbjct: 138 QKFSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGQTVLIMELINNIAKAHGGVSVFGGVG 197

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 198 ERTREGNDLYIEMKESGVINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 257

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG I
Sbjct: 258 NXQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAI 315

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V PL S S +       
Sbjct: 316 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVG 375

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 EEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|170178355|gb|ACB10597.1| ATP synthase beta subunit [Cornus capitata]
          Length = 455

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + ++ G  V   G    +        R
Sbjct: 11  KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATDCLTRGMEVVDTGAPLSVPVGGATLRR 70

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 71  IFNVLGEPVDNLGPVD-TRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPHRRGGKI 129

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 130 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIA 189

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 190 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 249

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 250 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 307

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 308 DATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 367

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 368 ILGLDELSEED-RLTVARARKIERFLSQP 395


>gi|124516445|gb|EAY57953.1| ATP synthase F1, beta subunit [Leptospirillum rubarum]
          Length = 463

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 107/408 (26%), Positives = 188/408 (46%), Gaps = 13/408 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           ++ G I  +      V      V  +   ++ +G +     Q  +I   +V    +   +
Sbjct: 1   METGEIIQVIGPVVDVRFPEGSVPDIYAALIVEGNDIILETQ-QQIGEGVVRSIAMSTTD 59

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V + G   ++       GR+++ LG P+D    +   +    I  + P     
Sbjct: 60  GLVRGMKVKNTGSPIQVPVGQSVLGRMMDVLGNPVDEAGPI-TAEARRSIHREPPGFEEL 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               + F+TGI+V+D+  P   G + G+F G+G+GK+ ++    R+   +     + + V
Sbjct: 119 ASATEVFETGIKVVDLIAPFAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGV 178

Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL- 253
           GER RE  +   +      + K+ +V    +E P +R    LT +T AEYF  +    + 
Sbjct: 179 GERTREGNDLWNEMKESKVIDKTSLVYGQMNEPPGVRLRVALTGLTQAEYFRDEERRDVL 238

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
             +D+I RF  +  E++   G +P A GY  ++  E+  L ERI  +  +KG+IT+V +V
Sbjct: 239 FFIDNIFRFTLAGAEVSALLGRMPSAVGYQPTLAVEMGGLQERI--TSTKKGSITSVQAV 296

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-L 372
            V  D+  DP   +  S LD  +VL+R +AE G YP VDPL S SR+ D     +E   +
Sbjct: 297 YVPADDLTDPAPATTFSHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPMIVGEEHYGV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   + ++++ +DI  I G     D    + V +   I  FL Q 
Sbjct: 357 ARAVQKTLQKYKDLQDIIAILGMDELSDDD-KRIVGRARRIQRFLSQP 403


>gi|295687682|ref|YP_003591375.1| ATP synthase F1 subunit beta [Caulobacter segnis ATCC 21756]
 gi|295429585|gb|ADG08757.1| ATP synthase F1, beta subunit [Caulobacter segnis ATCC 21756]
          Length = 536

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 109/425 (25%), Positives = 186/425 (43%), Gaps = 26/425 (6%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQV-IRINLDIVYICP 74
           NL    G +  I      +        + + V  V+       + +V   +  + V    
Sbjct: 56  NLDGATGRLVQIIGAVVDIEFDGALPAILNAVETVNTATGQRLVFEVAQHLGQNTVRAIA 115

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G   R+       GR++N +G+PID    + + D++  I    P
Sbjct: 116 MDATEGLVRGQPVRDTGASIRVPVGPGTLGRIMNVIGEPIDEQGPI-RSDITRTIHRDAP 174

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
               +    +   TGI+VID+  P   G +IG+F G+G+GK+  +     +        S
Sbjct: 175 TFAEQTNTAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYS 234

Query: 194 L---VGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLT 237
           +   VGER RE  +   + +  N+              +  +V    +E P  R    LT
Sbjct: 235 VLAGVGERTREGNDLYHEMIESNVNVDPKANNGSTEGSRCALVYGQMNEPPGARARVALT 294

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            ++IAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 295 GLSIAEYFRDEEGKDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQER 354

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R +A +  +P VDPL S
Sbjct: 355 I--TSTNKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDS 412

Query: 357 VSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            SR+ D     +E   +   +  ++ +++  +DI  I G     +      V +   I  
Sbjct: 413 TSRIMDPLVIGEEHYTVARRVQEVLQQYKALKDIIAILGMDELSEED-KLVVSRARKISR 471

Query: 416 FLKQS 420
           FL Q 
Sbjct: 472 FLSQP 476


>gi|195977927|ref|YP_002123171.1| F0F1 ATP synthase subunit beta [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868741|ref|YP_002744689.1| ATP synthase beta chain [Streptococcus equi subsp. zooepidemicus]
 gi|225870303|ref|YP_002746250.1| ATP synthase beta chain [Streptococcus equi subsp. equi 4047]
 gi|226740677|sp|B4U2E1|ATPB_STREM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|254808165|sp|C0M720|ATPB_STRE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|259585453|sp|C0MH17|ATPB_STRS7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|195974632|gb|ACG62158.1| ATP synthase beta chain AtpD [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699707|emb|CAW93438.1| ATP synthase beta chain [Streptococcus equi subsp. equi 4047]
 gi|225702017|emb|CAW99601.1| ATP synthase beta chain [Streptococcus equi subsp. zooepidemicus]
          Length = 468

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG+ ID +    
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEAPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  K P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 DDVNREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+   VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  ++ R+ E +DI  I G     +      V +   I 
Sbjct: 346 SSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILGMDELSEEE-KTLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|302747696|gb|ADL63329.1| Atp1 [Viviania marifolia]
          Length = 349

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKEMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|224830560|gb|ACN66375.1| ATP synthase beta chain [Parapachygone longifolia]
          Length = 489

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  +    P
Sbjct: 73  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-NRTTSPMXXSEP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI V D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTXLSIFETGIXVXDLLXPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
             G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 XFGGVGERTREGNDLYMEMKESGVINEQNIVESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 QPRIVGKEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 428


>gi|150187284|emb|CAK30216.1| ATP synthase alpha subunit [Streptococcus oralis ATCC 35037]
          Length = 367

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 13/370 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSA 99
           +    G+ ++ +  +    G    +    V I  +G   +I  GD +   G+   +    
Sbjct: 5   ENAMSGELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGD 61

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+ 
Sbjct: 62  SLIGRVVDPLGRPVDGLGDI-HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIG 120

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KK 216
            GQR  +      GK+T+      +        I   +G++   VR  +E          
Sbjct: 121 RGQRELIIGDRQTGKTTIAIDTILNQKGQDMICIYVAIGQKESTVRTQVETLRQYGALDY 180

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      
Sbjct: 181 TIVVTASASQPSPLLFLAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRP 240

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG
Sbjct: 241 PGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDG 300

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L   L   G  P +D  +SVSR+   A     KK+  +L   +  + E         
Sbjct: 301 QIFLGDGLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTK 357

Query: 395 YRPGVDLILD 404
           +   +D    
Sbjct: 358 FGSDLDAATQ 367


>gi|153951038|ref|YP_001397361.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. doylei
           269.97]
 gi|190358272|sp|A7H1I1|ATPB_CAMJD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|152938484|gb|ABS43225.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 484

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N  G  ID  + +   D    I    P   +
Sbjct: 63  DGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEI-PFDKKWAIHRDPPAFED 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLVVERARKIEKFLSQP 407


>gi|157964949|ref|YP_001499773.1| F0F1 ATP synthase subunit beta [Rickettsia massiliae MTU5]
 gi|157844725|gb|ABV85226.1| ATP synthase beta chain [Rickettsia massiliae MTU5]
          Length = 499

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 187/428 (43%), Gaps = 20/428 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
                +  +KN+      IS++  V +T       + L     +  K    L     I  
Sbjct: 20  FLTKEKIMAKNIGKITQIISAVVDVKFTNNGELPEI-LNALECYNDKQRIVLEVAQHIGD 78

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V    +   E +  G  V   G   RI       GR++N +G+PIDG   +   ++S 
Sbjct: 79  DTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNIS- 137

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P   N+        TGI+VID+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 138 SIYKPAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVA 197

Query: 187 FDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAP 235
                  + + VGER RE  +   + +             K  +V    +E P  R    
Sbjct: 198 KAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVA 257

Query: 236 LTAVTIAE--YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           L+ +TIAE     ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L
Sbjct: 258 LSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGEL 317

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDP
Sbjct: 318 QERI--TSTKYGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDP 375

Query: 354 LASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S++ D     +E   +   +  ++  ++  +DI  I G     +      V +   
Sbjct: 376 LDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKSLQDIIAILGMDELSEED-KLTVVRARK 434

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 435 IQRFLSQP 442


>gi|90961576|ref|YP_535492.1| F0F1 ATP synthase subunit beta [Lactobacillus salivarius UCC118]
 gi|227890662|ref|ZP_04008467.1| H(+)-transporting two-sector ATPase [Lactobacillus salivarius ATCC
           11741]
 gi|301299952|ref|ZP_07206179.1| ATP synthase F1, beta subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|118573690|sp|Q1WUC6|ATPB_LACS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|90820770|gb|ABD99409.1| ATP synthase beta chain [Lactobacillus salivarius UCC118]
 gi|227867600|gb|EEJ75021.1| H(+)-transporting two-sector ATPase [Lactobacillus salivarius ATCC
           11741]
 gi|300852434|gb|EFK80091.1| ATP synthase F1, beta subunit [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 468

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 14/411 (3%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD--IVYICPVG 76
           +  G +  +      V   LS+ +  + D +  + ++   L   + + L   I+    + 
Sbjct: 1   MSSGKVVQVIGPVVDVQFPLSESLPDIDDALKVKREDGTELVIEVALELGDGIMRTVAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GRV N LG  ID      +      I    P  
Sbjct: 61  STDGLKRGAEVEGTGASISVPVGKDTLGRVFNVLGNTIDNGPEFDEDHPRNPIHRDAPKY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   IS+ 
Sbjct: 121 DQLSTGIEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + +K+ +V    +E P  R    LT +T+AEYF      
Sbjct: 181 TGVGERTREGNDLYFEMKESGVLEKTAMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV-SRLADKAWSADE 369
            +V V  D++ DP   +  + LD    L RSL ++G YP VDPLAS  S L  +    + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLASTSSALTPEIVGEEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + + H++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 YEVATEVQHVLQRYRELQDIISILGMDELSDEE-KIIVARARRIQFFLSQN 408


>gi|4519338|dbj|BAA75584.1| ATP synthase beta-subunit [Pandorina unicocca]
          Length = 376

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLTVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|149798639|gb|ABR32010.1| ATP synthase beta chain [Actiniopteris dimorpha]
          Length = 426

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNLSESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|150187247|emb|CAK30205.1| ATP synthase alpha subunit [Streptococcus australis ATCC 700641]
          Length = 367

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 161/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ ++ +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGL-ENAMSGELLIFENGS---YGMAQNLETTDVGIIILGDFTDIREGDSIRRTGKIM 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV+N LG+P+DG   +   D    + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPAGDALIGRVVNPLGQPVDGLGEIV-TDKFRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+   + ++  + D     I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRK 175

Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGAMDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPIIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L  SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLQDSLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|11559336|dbj|BAB18826.1| ATP synthase beta-subunit [Volvulina steinii]
          Length = 376

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNLGNVFFEE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSESKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|300214400|gb|ADJ78816.1| ATP synthase subunit beta (F-ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Lactobacillus salivarius CECT
           5713]
          Length = 468

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 14/411 (3%)

Query: 21  VQGGYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD--IVYICPVG 76
           +  G +  +      V   LS+ +  + D +  + ++   L   + + L   I+    + 
Sbjct: 1   MSSGKVVQVIGPVVDVQFPLSESLPDIDDALKVKREDGTELVIEVALELGDGIMRTVAMD 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GRV N LG  ID      +      I    P  
Sbjct: 61  STDGLKRGAEVEGTGASISVPVGKDTLGRVFNVLGNTIDNGPEFDEDHPRNPIHRDAPKY 120

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
                  +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   IS+ 
Sbjct: 121 DQLSTGIEILETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVF 180

Query: 195 --VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             VGER RE  +   +     + +K+ +V    +E P  R    LT +T+AEYF      
Sbjct: 181 TGVGERTREGNDLYFEMKESGVLEKTAMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T++
Sbjct: 241 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSI 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV-SRLADKAWSADE 369
            +V V  D++ DP   +  + LD    L RSL ++G YP VDPLAS  S L  +    + 
Sbjct: 299 QAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLASTSSALTPEIVGEEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++ + + H++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 YEVATEVQHVLQRYRELQDIISILGMDELSDEE-KIIVARARRIQFFLSQN 408


>gi|63091859|emb|CAH58780.1| ATP synthase alpha chain [Tetragenococcus solitarius]
          Length = 367

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 158/375 (42%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L +    G+ +     +    G    +  + V I  +G  ++I  GD V   GR  
Sbjct: 1   RAHGL-ENAMSGELLEFANGS---YGMAQNLESNDVGIIILGDFDDIREGDKVKRTGRIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            I       GRV+N LG+ IDG   + K D +  +    P  M+RQ V +  +TG++ +D
Sbjct: 57  EIPVGDAMIGRVVNPLGQAIDGQGEI-KTDKTRPVEGPAPGVMDRQSVSQPLQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  V      GK+T+   ++  + D     I   +G++   VR   E    
Sbjct: 116 ALVPIGRGQRELVIGDRKTGKTTIAIDTILNQKDQDVICIYVAIGQKDSTVRAQTETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 +VV+ A + +   L  +AP   + I E F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTVVMAAGASQPAPLLYLAPYAGIAIGEEFMYNGKDVLVVFDDLSKQAAAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    YP  VF    RLLER      +   G++TA+  V     + +  I  +V
Sbjct: 236 LLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDLGGGSLTALPFVETQAGDISAYIPTNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D   SVSR+   A +   KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLESDLFYSGVRPSIDAGLSVSRVGGSAQTKAMKKVSGTLRVDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTQFGSDLDQAT 367


>gi|11466372|ref|NP_038375.1| ATP synthase CF1 beta subunit [Mesostigma viride]
 gi|12585166|sp|Q9MUT5|ATPB_MESVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|7259515|gb|AAF43816.1|AF166114_28 CF1 beta subunit of ATP synthase [Mesostigma viride]
          Length = 481

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G++     +V ++  D  V    +   + +  G  +   G    +       GR+ N LG
Sbjct: 45  GEDLSVTCEVQQLLGDNQVRAVAMSATDGLMRGLEILDTGAPLSVPVGEITLGRIFNVLG 104

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+DG   +        I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 105 EPVDGLGDVV-AKTKSPIHRNSPTFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 163

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 164 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLSSSKVAL 223

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 224 VYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPS 283

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++  E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 284 AVGYQPTLSREMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 341

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R+LA +G YP VDPL S S +       +E       +   + R++E +DI  I G   
Sbjct: 342 SRNLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYGTAQRVKQTLQRYKELQDIIAILGLDE 401

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 402 LSEED-RLVVARARKIERFLSQP 423


>gi|149384425|gb|ABR25035.1| ATP synthase beta chain [Asplenium scolopendrium]
          Length = 426

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|154424951|emb|CAL18578.1| ATP synthase alpha subunit [Streptococcus intermedius]
          Length = 365

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 162/373 (43%), Gaps = 14/373 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L   +  G+ ++ +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGLDNAMS-GELLIFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ LG+P+DG   + K D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGDALIGRVVDPLGRPVDGLGEV-KTDKTRPVETPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+++      +        I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTSIAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L+ SL   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLSDSLFNGGVRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDL 401
                 +   +D 
Sbjct: 355 --AFTKFGSDLDA 365


>gi|4995061|emb|CAB43982.1| H(+)-transporting ATP synthase [Aquilaria beccariana]
          Length = 476

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 180/421 (42%), Gaps = 30/421 (7%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G IS I   V   V    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 11  GRISQIIGPVLDVVFPRGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGTPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHKSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---V 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEIKESGVINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV-DPLASVSRL 360
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R L  +G YP V DPL S S +
Sbjct: 306 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLGAKGIYPAVEDPLDSTSTM 365

Query: 361 ADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   +  ++E +DI  I G     +      V +   I  FL Q
Sbjct: 366 LQPRIVGNEHYETAQRVKQTLQXYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 424

Query: 420 S 420
            
Sbjct: 425 P 425


>gi|241912920|gb|ACS72138.1| AtpB [Stenorrhynchos speciosum]
          Length = 489

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I   V   +    +   + + +V + +++     +   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVIKSRDTFVQQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N +G+P+D    +     +  I    P  
Sbjct: 73  ATDGLMRGLKVIDTGAPLSVPVGGATLGRIFNVIGEPVDNLGPVD-IRTTSPIHRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|149384419|gb|ABR25032.1| ATP synthase beta chain [Asplenium ritoense]
          Length = 426

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDAAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|15082073|gb|AAK84019.1|AF393838_8 H+-ATPase cytoplasmic F1-part beta-subunit [Lactococcus lactis
           subsp. lactis]
          Length = 469

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 113/415 (27%), Positives = 187/415 (45%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNS----DNLGQVIRINLDIVYI 72
           +  G I+ I      V        L +     +V++  N       L   + +    V  
Sbjct: 1   MSSGKITQIIGPVVDVE-FGSDAKLPEINNALIVYKDVNGLKTKITLEVALELGDGAVRT 59

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GRV N LG  IDG +          I  K
Sbjct: 60  IAMESTDGLTRGLEVLDTGKAVSVPVGEATLGRVFNVLGDVIDGGEEFAADAERNPIHKK 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P         +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +   
Sbjct: 120 APTFDELSTANEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGG 179

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF  
Sbjct: 180 ISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+
Sbjct: 240 VQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           +T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR L  +  
Sbjct: 298 VTSIQAIYVPADDYTDPAPATAFAHLDATTNLERRLTQMGIYPAVDPLASSSRALTPEIX 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q+
Sbjct: 358 GEEHYEVAMEVQRVLQRYKELQDIIAILGMDELSDDE-KILVGRARRIQFFLSQN 411


>gi|329902175|ref|ZP_08273064.1| Type III secretion cytoplasmic ATP synthase [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548846|gb|EGF33475.1| Type III secretion cytoplasmic ATP synthase [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 460

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 151/452 (33%), Positives = 236/452 (52%), Gaps = 24/452 (5%)

Query: 1   MQKNLETLAQ-----LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKN 55
           M + +  LA      LA+  +K      G ++ +             V +G+        
Sbjct: 13  MDRAIAGLAADSAGWLADLPAKPGFTSCGKVARVLGTVIEAH--MPPVQIGELCSLSNPG 70

Query: 56  S--DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGK- 111
           S  + L +V+  N     +  +   E +S    +        I       G V++  G+ 
Sbjct: 71  SSVELLAEVVGFNNHAALLSALSPLEGVSNSTRITPLRCSHSIEVGEHLLGCVLDGFGRM 130

Query: 112 ----PIDGDDSLGKG-DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
                I        G  +++ ++   P A +R R+     TG+R ID    +  GQRIGV
Sbjct: 131 QFRTAI--MPPEQPGWRVTVPVIRDAPKATDRPRITTVLPTGVRAIDGMLTMGRGQRIGV 188

Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSD 225
           FAG G GK+TL++  AR    D +I  L+GERGRE+ EF+  +   + ++K+++V ATSD
Sbjct: 189 FAGPGCGKTTLMASIARGCAADVIIFGLIGERGRELNEFLQHELDDELVRKTIIVCATSD 248

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
            + + R  A  +A  IAE F ++G NVLL++DS+TRFA + REI   +GE P   G+  S
Sbjct: 249 RTSMERSRAAFSATAIAEAFRARGKNVLLLIDSLTRFARAQREIGLAAGEPPARGGFTPS 308

Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345
           V++ LPRL+ER G     +G+ITA+ +VLVDG+  +DPI D  RS+LDGHIVL + LAE+
Sbjct: 309 VYTMLPRLIERAG--STTEGSITAMYTVLVDGETTSDPIGDEARSLLDGHIVLTKKLAEQ 366

Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
           G YP +D LAS+SR+     ++ ++K  S    L+ R++E   +  +G Y+PG D + D 
Sbjct: 367 GHYPAIDVLASISRVMSNVATSAQRKSASRFRELMARYDEMELLIRLGEYKPGGDPVADV 426

Query: 406 AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           AV   P    FL+Q    L+    F ++ ++L
Sbjct: 427 AVRLRPEQLKFLRQDTRHLT---PFDQMLRQL 455


>gi|149798637|gb|ABR32009.1| ATP synthase beta chain [Acrostichum danaeifolium]
          Length = 426

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGEITLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+RSLA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRSLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149184181|ref|ZP_01862499.1| ATPase FliI/YscN [Erythrobacter sp. SD-21]
 gi|148831501|gb|EDL49934.1| ATPase FliI/YscN [Erythrobacter sp. SD-21]
          Length = 443

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 148/427 (34%), Positives = 227/427 (53%), Gaps = 7/427 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLV-VQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDN 58
           MQ+ ++         S  L   + G + +       V+ L   V +G    + QG +  +
Sbjct: 1   MQQLIDQTLAAIGSLSLELAPRRFGRVVACDGGLIEVSGLG--VPIGTICTIAQGASLRH 58

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
             + I        +  +G    +  G  V   G+   +   + + GR ++  G+PIDG  
Sbjct: 59  RAETIGFRNGHTMMMMLGDTVLLRPGAEVRAEGKPGMLHVGSEFLGRAVDGAGEPIDGGG 118

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +           +V  A++R RV + F  GIR ++  T    GQRIG+ AGSG+GKS L
Sbjct: 119 PVLATTTWPAGGHRV-GALDRSRVTQMFDCGIRSLNALTTFGVGQRIGIMAGSGVGKSVL 177

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPL 236
           + M   +   D V++ L+GER REV +F+     G+    + +V   +D +  LR    +
Sbjct: 178 MDMIVDNAEADAVVVGLIGERAREVSDFVSRHMAGERAANTAIVAVPADHAANLRLRGAM 237

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A +IAE+  S+G  VLLILDS+TR AH+ REI    GE   ARGYP S  S + +++ER
Sbjct: 238 LATSIAEHLRSQGKRVLLILDSLTRVAHAAREIGILLGEPGAARGYPPSALSTITKMIER 297

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G S++  G IT + +VL DGD+HNDP+ D+ R+ILDGHIVL+R +A+ G+YP VD  AS
Sbjct: 298 AGNSKETGGAITGIYTVLADGDDHNDPVVDTARAILDGHIVLSREIAQRGQYPAVDVGAS 357

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR+ +   S +  +       L   FEE RD+ ++G YR G D +LD+A+ + P + DF
Sbjct: 358 LSRVMNDIVSVEHVENARKFRALSASFEENRDLIMMGAYRQGTDSLLDEAIIRQPRMSDF 417

Query: 417 LKQSPSD 423
           L Q   +
Sbjct: 418 LAQGTGE 424


>gi|46578726|ref|YP_009534.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603710|ref|YP_968110.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris DP4]
 gi|46448138|gb|AAS94793.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563939|gb|ABM29683.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio vulgaris
           DP4]
 gi|311232598|gb|ADP85452.1| ATPase, FliI/YscN family [Desulfovibrio vulgaris RCH1]
          Length = 437

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 223/418 (53%), Gaps = 6/418 (1%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
             G I+ +  +    + +   +     ++          +V+      +   P G    +
Sbjct: 20  TFGKITKVVGLVAEGSGIKAPLGAVCHMLPDDGGESVAAEVVGFRDGRLLFMPYGELRGV 79

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G L+ +              GR  +A G P+DG   +   +    + +  P  + R R
Sbjct: 80  RPGSLIRNSSLPPVFPVGEGLLGRAFDAFGAPLDGGTPVMP-EAWAPLYASPPNPLTRPR 138

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200
           ++     G+R I+    L  GQR+G+ AGSG+GKSTL+ M AR       +I L+GERGR
Sbjct: 139 IDTPLDVGVRCINSLLTLGRGQRVGIMAGSGVGKSTLMGMMARYTEAQVNVIGLIGERGR 198

Query: 201 EVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           EV EF+ +D   + + +SV+VVATSD+SP++R  A   A  +AE+F  +G +VLL++DS+
Sbjct: 199 EVVEFMEKDLGPEGMARSVLVVATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSV 258

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TRFA + RE+    GE P  +GY  +VF++LPRLLER G S +  G IT + +VLVDGD+
Sbjct: 259 TRFAMAAREVGLAVGEPPTTKGYTPTVFAQLPRLLERAGRSPE--GTITGIYTVLVDGDD 316

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            N+PIAD+VRSILDGHIVL R LA++G +P +D L S+SRL       D       LT  
Sbjct: 317 FNEPIADAVRSILDGHIVLTRELADQGHFPAIDVLKSISRLRTDICPDDIVNAGRILTRH 376

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKK 436
           +  F    D+  IG Y  G +  +DKA+  V  I DFL+Q  +D       ++++   
Sbjct: 377 MATFRRVEDMINIGAYATGSNPDIDKAIAMVGPINDFLRQHITDQQPLPGCYEQLLAL 434


>gi|33519491|ref|NP_878323.1| F0F1 ATP synthase subunit beta [Candidatus Blochmannia floridanus]
 gi|81666731|sp|Q7VQV6|ATPB_BLOFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|33517154|emb|CAD83536.1| ATP synthase beta subunit [Candidatus Blochmannia floridanus]
          Length = 464

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 171/365 (46%), Gaps = 10/365 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           V ++   IV    +G    +  G  V +     ++       GRV++ LG PID    + 
Sbjct: 48  VQQLGRSIVRCIAMGSTNGLKRGLDVTNLKHGIQVPVGKETLGRVMDVLGNPIDMKGPIN 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
             +    I    P        ++   TGI+VID+  P   G +IG+F G+G+GK+  +  
Sbjct: 108 SIE-KWSIHRSAPLYEELSSNQELLITGIKVIDLMCPFIKGGKIGLFGGAGVGKTVNIME 166

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPL 236
             R+   +     +   VGER RE  +F  +      L K  +V    +E P  R    L
Sbjct: 167 LIRNIAIEHAGYSVFVGVGERIREGNDFYHEMIHSGILDKVALVYGQMNEPPGNRLRVAL 226

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           T +TIAE F  +G +VLL +D+I R+  +  E++   G +P A GY +++  E+  L ER
Sbjct: 227 TGLTIAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRVPSAVGYQSTLSEEMGMLQER 286

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I     + G+IT+V ++ V  D+  DP   +  + LD  IVL+R +A  G YP VDPL S
Sbjct: 287 IA--STKSGSITSVQAIYVPADDLTDPSPTTTFAHLDATIVLSRQIAALGIYPAVDPLDS 344

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S+  D      +   + +++  ++ R++E +DI  I G     +      V +   I  
Sbjct: 345 YSKQLDPCIVGQEHYDIANNVKSILQRYQELKDIIAILGMDELSEED-KLIVLRSRKIQR 403

Query: 416 FLKQS 420
           FL Q 
Sbjct: 404 FLSQP 408


>gi|254432370|ref|ZP_05046073.1| ATP synthase F1, beta subunit [Cyanobium sp. PCC 7001]
 gi|197626823|gb|EDY39382.1| ATP synthase F1, beta subunit [Cyanobium sp. PCC 7001]
          Length = 486

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G +  +      V     Q   + + +  + KNS         +V ++  D  V    + 
Sbjct: 11  GIVRQVIGPVLDVEFPAGQLPKIYNALRIEAKNSAGQSIALTAEVQQLLGDHRVRAVAMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +   +L+  I    P  
Sbjct: 71  STDGLVRGMEALDTGAPISVPVGEATLGRIFNVLGEPVDEQGPVS-TNLTAPIHRAAPKL 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
              +   + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 130 TELETKPRVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 190 GGVGERTREGNDLYEEFKESGVINADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 250 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTL 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   D   +   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 AVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIEKFLSQP 424


>gi|149798731|gb|ABR32056.1| ATP synthase beta chain [Pteris cretica]
          Length = 426

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|313891352|ref|ZP_07824968.1| ATP synthase F1, beta subunit [Dialister microaerophilus UPII
           345-E]
 gi|313120127|gb|EFR43303.1| ATP synthase F1, beta subunit [Dialister microaerophilus UPII
           345-E]
          Length = 477

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 186/413 (45%), Gaps = 17/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVI-----RINLDIVYICP 74
           Q G +  +      +      +   + + +  + +N +    VI      +   +V    
Sbjct: 8   QVGKVVQVIGAVVDIAFKDDQELPAIYNAIHVKDENGNVPVDVICETMQHLGDGVVRAVA 67

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G      GR   +       GR+ N LG+ +D      K      I    P
Sbjct: 68  MSSTDGMVRGMKAVDTGRAIAVPVGDGCLGRIFNVLGQTVDNGTEEVKASDYWPIHRAAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---V 190
              ++    + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     
Sbjct: 128 AFKDQAPAAEIFETGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCS 187

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +     +  K+ +V    +E P  R    LT +T++EYF  K 
Sbjct: 188 VFCGVGERTREGNDLWGEMKESGVLSKAALVYGQMNEPPGARMRVALTGLTMSEYFRDKQ 247

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT
Sbjct: 248 GQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSIT 305

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SA 367
           +V +V V  D+  DP    V + LD   VLNRS+AE G YP VDPL S SR+ D      
Sbjct: 306 SVQAVYVPADDLTDPAPAGVFTHLDATTVLNRSIAELGIYPAVDPLDSTSRILDPNTLGE 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 366 EHYEVARGVQAILQRYKELQDIIAILGMEELSDED-KVIVARARKIQRFLSQP 417


>gi|4519312|dbj|BAA75571.1| ATP synthase beta-subunit [Gonium octonarium]
          Length = 376

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVTFSE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVERQLGDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|306996339|gb|ADN21389.1| ATP synthase beta subunit [Rhizobium endophyticum CCGE 2052]
          Length = 378

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 171/369 (46%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  VF  G    +       GR++N +G+P+D    L    
Sbjct: 12  LGENEVRTIAMDSSEGLVRGQEVFDTGAPISVPVGPETLGRIMNVIGEPVDEAGPLVTAS 71

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 72  KRA-IHQDAPSYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIN 130

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   + +        G    K+ +V    +E P  R 
Sbjct: 131 NVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARA 190

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +
Sbjct: 191 RVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQ 250

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +     +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VD
Sbjct: 251 MQERITTTTTG--SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVD 308

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +  ++   +   + R++  +DI  I G     +     AV +  
Sbjct: 309 PLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQDIIAILGMDELSEED-RLAVARAR 367

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 368 KIERFLSQP 376


>gi|242624355|ref|YP_003002273.1| ATP synthase CF1 beta chain [Aureoumbra lagunensis]
 gi|239997463|gb|ACS36985.1| ATP synthase CF1 beta chain [Aureoumbra lagunensis]
          Length = 475

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 178/417 (42%), Gaps = 21/417 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGI 77
              G ++ I      +   S  +        V     +  + +V ++  D  V    +  
Sbjct: 6   TSAGSVTQIIGPVLDIEFPSGQLPKVYNAINVTSENGAVVVCEVQQLLGDNKVRAVSMSS 65

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G    +       GR+ N LG+P+D    +   + ++ I    P   
Sbjct: 66  TDGLKRGIKAVDTGAPISVPVGGPTLGRIFNILGEPVDEMGDVDASE-TLPIHRSAPAFT 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
           + +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 125 DLETKPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 184

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +     +E P  R    LTA+T+AEYF
Sbjct: 185 GVGERTREGNDLYMEMKESGVINENNLSDSKVALCYGQMNEPPGARMRIGLTALTMAEYF 244

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +
Sbjct: 245 RDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQ 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +    
Sbjct: 303 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPE 362

Query: 365 WSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               E       +   + +++E +DI  I G     +     AV +   I  FL Q 
Sbjct: 363 IVGAEHYGTAQKVKETLQKYKELQDIIAILGIDELSEDD-KLAVARARKIERFLSQP 418


>gi|221633211|ref|YP_002522436.1| ATP synthase F1 subunit beta [Thermomicrobium roseum DSM 5159]
 gi|221156187|gb|ACM05314.1| ATP synthase F1, beta subunit [Thermomicrobium roseum DSM 5159]
          Length = 473

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 12/411 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGI 77
           V  G I  I  V   V      +       +V + +    + +V + +  D V    +  
Sbjct: 8   VATGRIVQIQGVVVDVEFPPGQLPDIYNALIVERPEGGRLVLEVQQHLGNDWVRAVAMST 67

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G   ++       GR+ N +G+PID    +        I    P   
Sbjct: 68  TDGLKRGMPVIDTGEPIKVPVGPATLGRIFNVVGEPIDEQGPVPGDAPRWPIHRPAPSFE 127

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
            +    + F+TG++VID+  P   G ++GVF G+G+GK+ ++    R+   +    S+  
Sbjct: 128 EQSTQVEVFETGLKVIDLVAPFTKGGKVGVFGGAGVGKTVIIMELIRNIAAEHGGYSVFC 187

Query: 197 ERGREVRE---FIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252
             G   RE      +      + K+V+V    +E P  R    LT +T+AEYF  +G +V
Sbjct: 188 GVGERTREGTQLWREMRESGVIDKTVLVFGQMNEPPGARLRVGLTGLTMAEYFRDEGRDV 247

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  ++G+IT+V +
Sbjct: 248 LLFIDNIFRFVQAGSEVSVLLGRMPSAVGYQPTLGTDMGQLQERI--TSTKRGSITSVQA 305

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKK 371
           + V  D++ DP   +  + LD  I L RS+AE+G YP VDPLAS SR+ D      +  +
Sbjct: 306 IYVPADDYTDPAPATTFAHLDATIALERSIAEQGLYPAVDPLASTSRILDPNIVGVEHYR 365

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +   +  ++ R+ + +DI  I G     +      V +   I  FL Q   
Sbjct: 366 VAREVQRVLQRYRDLQDIIAILGIEELSEED-KLIVARARKIQRFLSQPMF 415


>gi|289524798|emb|CBJ94455.1| alpha subunit of ATPase [Vibrio sp. Rd 16.2]
          Length = 408

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 93/396 (23%), Positives = 168/396 (42%), Gaps = 23/396 (5%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114
                  + +N D V    +G   ++  G  V   GR   +       GRV+N LG+PID
Sbjct: 6   GGRYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPID 65

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G   + +  L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK
Sbjct: 66  GKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGK 124

Query: 175 STLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           + +   ++  + D     I   +G++   +   +           +VVVVA++ ES  L+
Sbjct: 125 TAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHGALANTVVVVASASESAALQ 184

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    
Sbjct: 185 YLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHS 244

Query: 292 RLLERIGPSEKEK-------------GNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           RLLER     +               G++TA+  +     + +  +  +V SI DG I L
Sbjct: 245 RLLERAARVSEVYVERFTNGEVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL 304

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398
              L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   
Sbjct: 305 QTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSD 361

Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +D    K +     + + +KQ     +   VF +  
Sbjct: 362 LDEATKKQLDHGQKVTELMKQKQ--YAPMSVFDQAL 395


>gi|123325705|gb|ABM74477.1| ATP synthase beta subunit [Oxanthera neocaledonica]
          Length = 461

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 102/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D + Q I +  ++        V    +   + ++ G  V   G    +       GR
Sbjct: 31  KGRDTVDQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 90

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V D+  P   G +I
Sbjct: 91  IFNVLGEPVDNLGPVD-TRTTSPIHKSAPAFIQLXTRLSIFETGIKVXDLLAPYRRGGKI 149

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 150 GLFGGAGVGKTVLIMELINNXAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINDQNLS 209

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF    +  JL  +B+I RF  +  E++  
Sbjct: 210 ETKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEXDJLLFIBNIFRFVQAGSEVSAL 269

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 270 LGRMPXAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 327

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 328 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIA 387

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 388 ILGLDELSEED-RLTVARARKIERFLSQP 415


>gi|119350481|gb|ABL63191.1| AtpB [Closteriopsis acicularis]
          Length = 392

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +   +  + I
Sbjct: 5   VRAVAMSATDGLMRGMEVVDTGHALSVPVGQATLGRIFNVLGEPVDDLGPVNNKEQ-LPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +            +  K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESRVIDEDNISESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|311070200|ref|YP_003975123.1| F0F1 ATP synthase subunit beta [Bacillus atrophaeus 1942]
 gi|310870717|gb|ADP34192.1| F0F1 ATP synthase subunit beta [Bacillus atrophaeus 1942]
          Length = 473

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 108/415 (26%), Positives = 178/415 (42%), Gaps = 23/415 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDF-----VVHQGKNSDNLGQ------VIRINLDIVYI 72
           G +S +      V     ++   +      V       + +G        + +  D V  
Sbjct: 4   GRVSQVMGPVVDVRFEDGHLP--EIYNAIKVSQPATGENEVGIDLTLEVALHLGDDTVRT 61

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + I  G      G    +       GRV N LG+ ID ++ L        I  +
Sbjct: 62  IAMASTDGIQRGMEAVDQGSPISVPVGNVTLGRVFNVLGENIDLNEPLAANTEKDPIHRQ 121

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +   
Sbjct: 122 APSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGG 181

Query: 192 ISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+    G   RE    F E      + K+ +V    +E P  R    LT +T+AE+F  
Sbjct: 182 ISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFRD 241

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +    G+
Sbjct: 242 VQGQDVLFFIDNIYRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNVGS 299

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           +T++ ++ V  D++ DP   +  + LD    L R L E G YP VDPLAS SR LA +  
Sbjct: 300 VTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLASTSRALAPEIV 359

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +   +   + R++E +DI  I G     D      V +   I  FL Q+
Sbjct: 360 GEEHYAVAREVQSTLQRYKELQDIIAILGMDELSDED-KLVVQRARRIQFFLSQN 413


>gi|317154799|ref|YP_004122847.1| ATP synthase F1 subunit beta [Desulfovibrio aespoeensis Aspo-2]
 gi|316945050|gb|ADU64101.1| ATP synthase F1, beta subunit [Desulfovibrio aespoeensis Aspo-2]
          Length = 465

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 114/429 (26%), Positives = 193/429 (44%), Gaps = 20/429 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSD---NLGQV-IRINLDIVYICP 74
              G I+ +      V      +   L    +    N+D    + +V   +  ++V    
Sbjct: 2   ANTGKIAQVIGAVVDVEFADGTLPNILSALEIKNPNNTDAPVLICEVAQHLGNNVVRTIA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G      G    +   +   GR++N +G+P D    +   +  M I    P
Sbjct: 62  MDATEGLVRGMAALDLGQPISVPVGSGSLGRIMNVVGEPADEMGPI-PCEKRMPIHRLAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         
Sbjct: 121 SFTEQSTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGIS 180

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +   +     + +K+ +V    +E P  R    LTA+T AEYF  + 
Sbjct: 181 VFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALTCAEYFRDEE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT
Sbjct: 241 GQDVLLFVDNIFRFTQAGAEVSALLGRMPSAVGYQPTLGTDLGGLQERI--TSTNKGSIT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           +V +V V  D+  DP   +  S LDG +VL+R+++E G YP VDPL S SR+ D     +
Sbjct: 299 SVQAVYVPADDLTDPAPATTFSHLDGTLVLSRAISELGIYPAVDPLDSTSRILDPHVIGE 358

Query: 369 -EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427
                   +  ++ +++E +DI  I G     D      V +   I  FL Q        
Sbjct: 359 VHYATAREVQSVLQKYKELQDIIAILGMDELSDED-KSTVARARRIQRFLSQP---FHVA 414

Query: 428 DVFQEITKK 436
           +VF  +  K
Sbjct: 415 EVFTGVAGK 423


>gi|119350465|gb|ABL63183.1| AtpB [Carteria sp. UTEX2]
          Length = 379

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 1   VRAVAMNPTEGLMRGMEVLDTGKPLTVPVGKVTLGRIFNVLGEPVDNLGPVNAEE-KLPI 59

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 60  HRLAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 119

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V     E P+      L+
Sbjct: 120 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKNLTDSKVALVYGQMXEPPVAXMRVALS 179

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 180 ALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 239

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP      + LD   VL+R+LA +G YP VDPL S
Sbjct: 240 I--TSTKDGSITSIQAVYVPADDLTDPAPAVTFAHLDATTVLSRNLAAKGIYPAVDPLES 297

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +       ++   + R++E +DI  I G     +      V +   I  
Sbjct: 298 TSTMLQPWIVGEKHYGSAQAVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 356

Query: 416 FLKQS 420
           FL Q 
Sbjct: 357 FLSQP 361


>gi|329667588|gb|AEB93536.1| ATP synthase beta chain [Lactobacillus johnsonii DPC 6026]
          Length = 480

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 119/410 (29%), Positives = 193/410 (47%), Gaps = 18/410 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD----IVYICPVGI 77
           G I  +      V   L + +  + + +     N D L  V+ + L+    ++    +  
Sbjct: 4   GEIVQVIGPVVDVEFPLDKDLPDINNALRVTNNNGDTL--VLEVTLELGDGVLRTISMES 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG PIDG  +LGK      I  + P   
Sbjct: 62  TDGLRRGMEVEDTGAPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKREGIHKEAPKYD 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                E+  +TGI+VID+  P   G ++G+F G+G+GK+T++     +   +   IS+  
Sbjct: 122 ELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFT 181

Query: 195 -VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +     +  K+ +V    +E P  R    LT +TIAEYF      +
Sbjct: 182 GVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLD 241

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ 
Sbjct: 242 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQ 299

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D++ DP   +  + LD    L R L E+G YP VDPL S S   D      +  
Sbjct: 300 AVYVPADDYTDPAPATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHY 359

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   + H++ R++E +DI  + G     D      V +   I  FL Q+
Sbjct: 360 EVAVKVQHILQRYQELQDIISVLGMDELSDDE-KLIVERARKIQFFLSQN 408


>gi|19033067|gb|AAL83518.1|AF408790_1 ATP synthase beta subunit [Coleochaete irregularis]
          Length = 402

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDAIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDTSK 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +S  I    P           F+TGI+ +D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  VS-PIHRPAPAFTQLDTKLSIFETGIKAVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +            +  K  +V    +  P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESIVINSDNLSESKVALVYGQMNVPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|42518865|ref|NP_964795.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii NCC 533]
 gi|81832255|sp|Q74K15|ATPB_LACJO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|41583151|gb|AAS08761.1| ATP synthase beta chain [Lactobacillus johnsonii NCC 533]
          Length = 480

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 119/410 (29%), Positives = 193/410 (47%), Gaps = 18/410 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD----IVYICPVGI 77
           G I  +      V   L + +  + + +     N D L  V+ + L+    ++    +  
Sbjct: 4   GEIVQVIGPVVDVEFPLDKDLPDINNALRVTNNNGDTL--VLEVTLELGDGVLRTISMES 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG PIDG  +LGK      I  + P   
Sbjct: 62  TDGLRRGMEVEDTGAPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKREGIHKEAPKYD 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                E+  +TGI+VID+  P   G ++G+F G+G+GK+T++     +   +   IS+  
Sbjct: 122 ELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFT 181

Query: 195 -VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +     +  K+ +V    +E P  R    LT +TIAEYF      +
Sbjct: 182 GVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLD 241

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ 
Sbjct: 242 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQ 299

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D++ DP   +  + LD    L R L E+G YP VDPL S S   D      +  
Sbjct: 300 AVYVPADDYTDPAPATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHY 359

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   + H++ R++E +DI  + G     D      V +   I  FL Q+
Sbjct: 360 EVAVKVQHILQRYQELQDIISVLGMDELSDDE-KLIVERARKIQFFLSQN 408


>gi|225619150|ref|YP_002720376.1| F0F1 ATP synthase subunit beta [Brachyspira hyodysenteriae WA1]
 gi|225213969|gb|ACN82703.1| F0F1 ATP synthase subunit beta [Brachyspira hyodysenteriae WA1]
          Length = 470

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 182/379 (48%), Gaps = 12/379 (3%)

Query: 50  VHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
             +G     + +V + +    V    +   + IS GD +F  G    +       GR+ N
Sbjct: 38  EIEGVQRHIICEVQQHLGGGRVRAIALESTDGISRGDDIFDTGNHIMVPVGTETIGRIFN 97

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+ +D  + +   +    I +  P   N +   + F+TGI+VID+  P   G + G+F
Sbjct: 98  VLGQTVDKGEPIVAKEYR-SIHASPPKFENLEPKLEIFETGIKVIDLLAPYIKGGKTGLF 156

Query: 168 AGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
            G+G+GK+ L+     +   +     + + VGER RE  +   +      + K+ +V   
Sbjct: 157 GGAGVGKTVLIMELIHNIASEHGGYSVFAGVGERTREGNDLWSEMKESGVINKTCLVYGQ 216

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 217 MNEPPGARLRVALSALTMAEYFRDSAGLDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 276

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R +
Sbjct: 277 QPTLATEMGALQERI--TSTKNGSITSIQAVYVPADDLTDPAPATAFTHLDATTVLSREV 334

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +E+G YP VDPLAS SR+ D      +   +   + H++ R+ + +DI  I G     + 
Sbjct: 335 SEKGIYPAVDPLASTSRILDPNILGQEHYDVARKVQHILQRYRDLQDIIAILGADELSED 394

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 395 D-KLIVSRARKIEQFLSQP 412


>gi|71032549|ref|XP_765916.1| ATP synthase F1 subunit beta [Theileria parva strain Muguga]
 gi|68352873|gb|EAN33633.1| ATP synthase F1, beta chain, putative [Theileria parva]
          Length = 583

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 113/425 (26%), Positives = 187/425 (44%), Gaps = 29/425 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV-YICPVGIGE 79
           ++ GYIS +      V        + + +      +    +V +   D V     +G  E
Sbjct: 102 MRKGYISQVIGAVVDVRFDGPPPPILNALWVDNDGTKLSLEVAQHLGDGVARSIAMGATE 161

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G    I       GR++N  G  IDG   + K +  + I    P   ++
Sbjct: 162 GLMRGQEVLDTGSPITIPVGTPTLGRIMNVTGDAIDGFGPI-KSEHHLPIHRPAPSFEDQ 220

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
           +  E    TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         I + V
Sbjct: 221 KSDEALLITGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVANKHGGYSIFAGV 280

Query: 196 GERGREVREFIEDYLGDNL------------------KKSVVVVATSDESPILRKMAPLT 237
           GER RE  E   + L   +                   K+ +V    +E P  R    LT
Sbjct: 281 GERTREGNELYHEMLSTGVIKRTIKPNGKGDEADFTGSKASLVYGQMNEPPGARARVALT 340

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ER
Sbjct: 341 GLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDLGSLQER 400

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S
Sbjct: 401 I--TTTKKGSITSVQAIYVPADDITDPAPATTFTHLDATTVLSRQIAELGIYPAVDPLDS 458

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            SR+       + +  +  ++  ++  ++  +DI  I G     +      V +   +  
Sbjct: 459 TSRMLSSHIVGERQYNVARAVQKILQDYKSLQDIIAILGMDELSEDD-KFVVARARKVQR 517

Query: 416 FLKQS 420
           FL Q 
Sbjct: 518 FLSQP 522


>gi|158602245|gb|ABW74589.1| ATP synthase beta subunit [Adonis amurensis]
          Length = 480

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G+  D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVSFPPGKMPNIYNALVVKGQ--DTIGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+              I    P
Sbjct: 61  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPV-XXXXXXXXXXXXPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 416


>gi|170516126|gb|ACB15073.1| ATPase alpha subunit [Microstrobos fitzgeraldii]
          Length = 358

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 84/361 (23%), Positives = 151/361 (41%), Gaps = 19/361 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL--GKGDLSM 126
           V I   G    I  GDLV   G    +        RV++ALG PIDG  +L    G    
Sbjct: 1   VGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKALLDRVVDALGVPIDGKGALQVDGGAERR 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +  
Sbjct: 61  RVEAKAPGIIERKSVHEPLQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQK 120

Query: 187 ----------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     D L  +++  AT+ +   L+ +AP
Sbjct: 121 RSHLRSGTSDSVYCVYVAIGQKRSTVAQLVQILSEADALGYTIINAATASDPAPLQFLAP 180

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EYF   G + ++I D +++ A + R+++      P    +P  VF   PRLLE
Sbjct: 181 YSGCAMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHPRLLE 240

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R          G++TA+  +     + +  I  +V SI DG I L   L   G  P ++ 
Sbjct: 241 RAAKRSDHTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 300

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  SL   + ++ E   +     +   +D      +++   +
Sbjct: 301 GLSVSRVGSAAQLKATKQVCGSLKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARL 357

Query: 414 Y 414
            
Sbjct: 358 T 358


>gi|156530089|gb|ABU75141.1| AtpB [Casimiroa edulis]
          Length = 479

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------VYIC 73
           G+I+ I      V      +       VV   K  D  GQ I +  ++        V   
Sbjct: 2   GHIAQIIGPVLDVAFPPGKMPNIYNALVV---KVRDTAGQPINVTCEVQQLLGNNRVRAV 58

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + ++ G  V   G    +       GR+ N LG+ +D    +    +S  I    
Sbjct: 59  AMSATDGLTRGMDVIDTGAPLSVPVGGATLGRIFNVLGEAVDNLGPVDTRTMS-PIHKSA 117

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 118 PAFIQLDTSLSIFETGIKVVDLLAPNRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 177

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+ +
Sbjct: 178 SVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALAM 237

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 238 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 295

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 296 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 355

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +   + R++E +DI  I G     +      V +   I  FL Q
Sbjct: 356 LQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 414

Query: 420 S 420
            
Sbjct: 415 P 415


>gi|179184184|gb|ACB78139.1| ATPase [Aliivibrio finisterrensis]
          Length = 413

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 93/420 (22%), Positives = 173/420 (41%), Gaps = 27/420 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
               +  L+  V  G+ +   G         + +  D V    +G   ++  G  V   G
Sbjct: 1   GIIRIHGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  +      GK+ +   ++  + +     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELIIGDRQTGKTAMAIDAIINQKNSGIYSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    ++VVVA++  S  L  +AP +   + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTIVVVASASASAALPYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVL 314
           +I+      P    +P  VF    RLLER     +             + G++TA+  + 
Sbjct: 236 QISLLLKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVKGKTGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFTAGVRPAVDPGISVSRVGGAAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
            +   + ++ E   +     +   +D    K +     + + +KQ     +   VF +  
Sbjct: 356 GIRTALAQYRE---LAAFAQFSSDLDDATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 410


>gi|130750316|gb|ABO32263.1| ATP synthase subunit B [Centrolepis monogyna]
          Length = 424

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   E +  G  V   G    +       GR+ N LG+P+D    +     + 
Sbjct: 2   NRVRAVAMSATEGLMRGMEVIDTGAPISVPVGKVTLGRIFNVLGEPVDNLGPVDIS-ATS 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 61  PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 120

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 121 KAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKDLGESKVALVYGQMNEPPGARMRVG 180

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 181 LTALTMAEYFRDVNKKDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQ 240

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  +K +IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 241 ERI--TSTKKASITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPL 298

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 299 DSTSTMLQPQIVGNEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKI 357

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 358 ERFLSQP 364


>gi|61968301|gb|AAX57077.1| ATP synthase beta subunit [Pseudolachnostylis maprouneifolia]
          Length = 479

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 108/420 (25%), Positives = 175/420 (41%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 9   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 66

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 67  MSATDGLMRGVEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATYPIHRSAP 125

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---V 190
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 126 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 185

Query: 191 IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   VGER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 186 VFGGVGERTREGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 245

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 246 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 303

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G I      +   D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 304 TKEGAILLFKQFMYLADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 363

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 422


>gi|63091815|emb|CAH58758.1| ATP synthase alpha chain [Streptococcus pneumoniae]
          Length = 367

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 164/375 (43%), Gaps = 14/375 (3%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
               L + V  G+ +  +  +    G    +    V I  +G   +I  GD +   G+  
Sbjct: 1   RAHGL-ENVMSGELLNFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIM 56

Query: 95  -ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
            +       GRV++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID
Sbjct: 57  EVPVGESLIGRVVDPLGRPVDGLGEI-HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAID 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG 211
              P+  GQR  +      GK+T+   ++  + D     I   +G++   VR  +E    
Sbjct: 116 ALVPIGRGQRELIIGDRQTGKTTIAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRQ 175

Query: 212 DNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
                 ++VV A++ +   L  +AP T V +AE F  +G +VL++ D +++ A + RE++
Sbjct: 176 YGALDYTIVVTASASQPSPLLFLAPYTGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELS 235

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSV 328
                 P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V
Sbjct: 236 LLLRRPPGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNV 295

Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388
            SI DG I L   L   G  P +D  +SVSR+   A     KK+  +L   +  + E   
Sbjct: 296 ISITDGQIFLGDGLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE- 354

Query: 389 IRLIGGYRPGVDLIL 403
                 +   +D   
Sbjct: 355 --AFTKFGSDLDAAT 367


>gi|42558334|gb|AAS19876.1| ATP synthase beta chain [Ctenopteris rhodocarpa]
          Length = 422

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVYKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATTFAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|21956012|dbj|BAC06376.1| ATP synthase beta-subunit [Vitreochlamys pinguis]
          Length = 376

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G D+V       +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMDVVETGKPLSVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|328871057|gb|EGG19428.1| ATP synthase beta chain [Dictyostelium fasciculatum]
          Length = 656

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 106/386 (27%), Positives = 182/386 (47%), Gaps = 20/386 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  +IV    + I + ++ G  V + G   ++       GR++N +G+PIDG   +   D
Sbjct: 151 LGDNIVRCVALEITDGLARGTTVLNTGAPLKVPVGRPTLGRIMNVIGEPIDGRGPII-SD 209

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I  + P             TGI+VID+ TP   G +IG+F G+G+GK+ L+     
Sbjct: 210 TYLPIWREPPRFDELAPSASILVTGIKVIDLLTPYARGGKIGLFGGAGVGKTVLIQELIN 269

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +   +        K  +V    +E P  R  
Sbjct: 270 NVAKSHGGFSVFAGVGERTREGNDLWNEMITAGVIKLDGEGSKVSLVFGQMNEPPGARAR 329

Query: 234 APLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF   +  +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 330 VTLTGLTVAEYFRDVENQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGS 389

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +  + G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VD
Sbjct: 390 MQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAVSELGIYPAVD 447

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S S + D      +   + +S+  ++  ++  +DI  I G     +      V++  
Sbjct: 448 PLDSTSLMLDPNIIGQEHYTVATSVQKILQEYKGLQDIIAILGMDDLSEEQ-KTIVYRAR 506

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL Q        + F  +  KL
Sbjct: 507 KIQRFLSQP---FEVAEAFTNMKGKL 529


>gi|302747328|gb|ADL63145.1| Atp1 [Alluaudia ascendens]
          Length = 350

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 18/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L        +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSGDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCF-----------DKVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 119 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 178

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 179 AMEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 238

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 239 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 298

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 299 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 350


>gi|33327757|gb|AAQ09242.1| ATP synthase beta subunit [Pachysandra terminalis]
          Length = 495

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 177/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 18  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 75

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D          S  I    P
Sbjct: 76  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLXXXXXXXXS-PIHRSAP 134

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 135 AFIQLDTKLSIFXTGIKVVDLLAPYRRGGKIGLFXGAGVGKTVLIMELINNIAKAHGGVS 194

Query: 194 LVGE---RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G    R RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 195 VFGGVGXRTREGNDLYMEMXESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 254

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 255 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGXXXSAVGYQPTLSTEMGSLQERI--TS 312

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R L+ +G YP VDPL S S + 
Sbjct: 313 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLSAKGIYPAVDPLDSTSTML 372

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 373 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 431


>gi|317055015|ref|YP_004103482.1| ATP synthase F1 subunit beta [Ruminococcus albus 7]
 gi|315447284|gb|ADU20848.1| ATP synthase F1, beta subunit [Ruminococcus albus 7]
          Length = 468

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 184/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  I      V    +++  L + +      +  + +V   I  D+V    +   + +
Sbjct: 7   GKVVQIVGAVVDVRFDKEHMPNLLNALEIDNNGTKLVVEVAQHIGDDVVRCIAMSSTDGL 66

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V       +        R+ N LG P+D   +    +   EI  + P    +  
Sbjct: 67  VRGVDAVDTGRAISVPVGRETLSRMFNLLGDPVDNLPAPETAE-RWEIHREPPSYEEQTA 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+   VGE
Sbjct: 126 ANEILETGIKVIDLIAPYLKGGKIGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      + K+V+V    +E P  R    L+ +T+AEYF      +VLL 
Sbjct: 186 RTREGNDLYWEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+RS+A  G +P VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R+ E +DI  I G     D      V +   I  FL Q 
Sbjct: 364 QVQSILQRYVELQDIIAIMGMDELSDED-KLTVSRARKIQRFLSQP 408


>gi|56236574|gb|AAV84654.1| ATP synthase beta subunit [Pseudotsuga menziesii]
          Length = 419

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 163/366 (44%), Gaps = 18/366 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + ++ G  V   G    +       GR+ N LG+P+D    +    ++  
Sbjct: 3   KVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVD-ARITSP 61

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 62  IHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 121

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 122 AHGGVSVFGGVGERTREGNDLYMEMKESGVINEQSISESKVALVYGQMNEPPGARMRVGL 181

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 182 TALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQE 241

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  ++G+IT++ +V V  D+  DP   +  +  D   V +R LA +G YP VDPL 
Sbjct: 242 RI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHSDATTVPSRGLAAKGIYPAVDPLD 299

Query: 356 SVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +        +  +    +   + R++E +DI  I G     +      V +   I 
Sbjct: 300 STSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAIPGLDELSEED-RLIVARARKIE 358

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 359 RFLSQP 364


>gi|28188341|gb|AAL92550.1| ATP synthase beta subunit [Coleochaete sp. 528a3]
          Length = 385

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 160/364 (43%), Gaps = 18/364 (4%)

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   + +  G      G    +       GR+ N LG+P+D    +     +  I 
Sbjct: 1   RAVSMSATDGLMRGMDAIDTGAPLSVPVGEATLGRIFNVLGEPVDELGPVDST-TTFPIH 59

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
              P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +     
Sbjct: 60  RSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 119

Query: 190 VIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTA 238
             +S+ G   ER RE  +   +               K  +V    +E P  R    LTA
Sbjct: 120 GGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTA 179

Query: 239 VTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 180 LTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI 239

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S 
Sbjct: 240 --TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST 297

Query: 358 SRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           S +        +  +    +   + R++E +DI  I G     +      V +   I  F
Sbjct: 298 STMLQPWIVGKEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERF 356

Query: 417 LKQS 420
           L Q 
Sbjct: 357 LSQP 360


>gi|149798733|gb|ABR32057.1| ATP synthase beta chain [Pteris multifida]
          Length = 426

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEEKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149798711|gb|ABR32046.1| ATP synthase beta chain [Onychium japonicum]
          Length = 426

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + + +
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNN 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  ITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNLSESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|153815545|ref|ZP_01968213.1| hypothetical protein RUMTOR_01781 [Ruminococcus torques ATCC 27756]
 gi|317502196|ref|ZP_07960370.1| ATP synthase F1 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088761|ref|ZP_08337671.1| ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847187|gb|EDK24105.1| hypothetical protein RUMTOR_01781 [Ruminococcus torques ATCC 27756]
 gi|316896405|gb|EFV18502.1| ATP synthase F1 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407284|gb|EGG86787.1| ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 462

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 189/407 (46%), Gaps = 15/407 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +  +      + +V   +  + V    +   E +
Sbjct: 4   GKIIQVMGPVVDVVFQDGNLPFIKDALEVENNGKKCVMEVAQHLGNNEVRCLMLAASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG+ +D  + +   D    I    P   ++  
Sbjct: 64  HKDMEVTATGAGIKVPVGEKTLGRLFNVLGETVDDGEQITDADQ-WVIHRDPPTFEDQSP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 VVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL 
Sbjct: 183 RSREGNDLWTEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHRNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V V
Sbjct: 243 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ +
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKVVEQGIYPAVDPLESSSRILEAEIVGEEHYEVAN 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     D   DKA V +   I  FL Q 
Sbjct: 361 KVIAILQKYKELQDIIAILGMEELSDE--DKATVMRARKIQKFLSQP 405


>gi|302747486|gb|ADL63224.1| Atp1 [Hibbertia cuneiformis]
 gi|302747556|gb|ADL63259.1| Atp1 [Nerium oleander]
 gi|302747586|gb|ADL63274.1| Atp1 [Phyllanthus angustifolius]
 gi|302747672|gb|ADL63317.1| Atp1 [Tetracera asiatica]
          Length = 349

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQ 349


>gi|34539329|gb|AAQ74548.1| F1-ATPase alpha subunit [Hypoxis occidentalis]
          Length = 418

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 90/409 (22%), Positives = 161/409 (39%), Gaps = 23/409 (5%)

Query: 28  SITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV 87
           S+      V  L++ +  G+ V      S   G  + +  + V     G    I  GDLV
Sbjct: 2   SVGDGIARVYGLNE-IQAGEMVEFA---SGVKGIAMNLENENVGXVVFGXDTAIKEGDLV 57

Query: 88  FHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146
              G     P      GRV+ ALG PIDG  +L   +    +    P  + R+ V    +
Sbjct: 58  KRTGSIVDVPAGKAMLGRVVXALGVPIDGRGALSDHE-RXRVXVXAPGIIERKSVHXPMQ 116

Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--------SMFARSDCFD---KVIISLV 195
            G++ +D   P+  GQR  +      GK  +          M +R          +   +
Sbjct: 117 XGLKXVDSLVPIGRGQRXLIIGXXQAGKXAIAIDTILXQKQMNSRGTSESETLYCVYVAI 176

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V + ++     N  + S++V  T+ +   L+ +AP +   + EYF   G + L+
Sbjct: 177 GQKRSTVAQLVQILPEANALEYSILVAPTASDPAPLQFLAPYSGCAMGEYFRDNGMHALI 236

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVIS 312
           I D +++ A + R+++      P    +P  VF    RLLER      +   G++TA+  
Sbjct: 237 IYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPV 296

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372
           +     + +  I  +V  I DG I     L   G  P ++   SVSR+   A     K++
Sbjct: 297 IETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLRTMKQV 356

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             S    + ++ E   +     +   +D       ++   + +  KQ  
Sbjct: 357 CGSSKLELAQYRE---VAAFAQFGSDLDAATQALPNRGARLTEVPKQPQ 402


>gi|329890939|ref|ZP_08269282.1| ATP synthase F1, beta subunit [Brevundimonas diminuta ATCC 11568]
 gi|328846240|gb|EGF95804.1| ATP synthase F1, beta subunit [Brevundimonas diminuta ATCC 11568]
          Length = 513

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/423 (24%), Positives = 183/423 (43%), Gaps = 30/423 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQG---KNSDNLGQVIR----INLDIVYICPVG 76
           G I+ +      V        +   +  Q    K  +    V+     +  ++V    + 
Sbjct: 35  GKIAQVIGAVVDVEFEGHLPAILSALETQNVDQKTGEPFTLVLEVAQHLGENMVRAIAMD 94

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G+           GR++N +G+PID    +   +    I  + P  
Sbjct: 95  TTEGLTRGQPVVDTGKSIMAPVGPGTLGRIMNVVGQPIDEAGPILTTEYR-PIHKEAPTF 153

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             +    +   TGI+VID+  P   G + G+F G+G+GK+  +     +        S+ 
Sbjct: 154 DEQSTSAEILVTGIKVIDLICPYTKGGKTGLFGGAGVGKTVTMQELINNIAKAYGGYSVL 213

Query: 195 --VGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAV 239
             VGER RE  +   + +  N+              K  +V    +E P  R    LT +
Sbjct: 214 AGVGERTREGNDLYHEMIESNVNVDPAKNNGSTEGSKCALVYGQMNEPPGARARVALTGL 273

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +IAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 274 SIAEYFRDEEGKDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGNLQERI- 332

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +A +  +P VDPL S S
Sbjct: 333 -TSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRDIAAQAIFPAVDPLDSTS 391

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  ++   +  ++ +++  +DI  I G     +      V +   I  FL
Sbjct: 392 RIMDPLVIGEEHYQVARRVQEILQQYKALKDIIAILGMDELSEDD-KLVVSRARKIQRFL 450

Query: 418 KQS 420
            Q 
Sbjct: 451 SQP 453


>gi|179183994|gb|ACB78132.1| ATPase [Vibrio rarus]
          Length = 393

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 94/400 (23%), Positives = 168/400 (42%), Gaps = 25/400 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L++ V  G+ +      S      + +  D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAE-VMQGEMIELP---SGRYALALNLERDSVGAVVMGPYADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPELLGRVVNTLGEPIDGKGPINAA-LTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +      GK+ +   ++  + D     +   +G++   +   +       
Sbjct: 116 IPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSVYVAIGQKASTIANVVRKLEEHG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               ++VVVA++ ES  L  +AP     + EYF  +G++ L+I D +++ A + R+I+  
Sbjct: 176 ALANTIVVVASASESAALPYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
           + ++ E         +   +D    K +     + + +KQ
Sbjct: 356 LAQYREL---AAFAQFSSDLDDTTKKQLDHGAKVTELMKQ 392


>gi|114509224|gb|ABI75180.1| ATPase alpha subunit [Posidonia oceanica]
          Length = 351

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 15/345 (4%)

Query: 56  SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPID 114
           S   G  + +  + V I   G    I  GDLV   G     P      GRV++ALG PID
Sbjct: 7   SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKSLLGRVVDALGVPID 66

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
           G  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK
Sbjct: 67  GRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGK 125

Query: 175 STL----------LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVAT 223
           + +          L+  A+ +     +   +G++   V + ++     N  + S++V AT
Sbjct: 126 TAIAVDTILNQKELNAMAKENAKLYCVYVAIGQKRSTVAQLVQILSSANALEYSILVAAT 185

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283
           + +   L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P
Sbjct: 186 ASDPAPLQFLAPYSGCALGEYFLDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFP 245

Query: 284 TSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
             VF    RLLER     +E   G++TA+  +     + +  I  +V  I DG I L   
Sbjct: 246 GDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETE 305

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           L   G  P ++   SVSR+   A     K++  S    + ++ + 
Sbjct: 306 LFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQYRKV 350


>gi|119350553|gb|ABL63227.1| AtpB [Stichococcus bacillaris]
          Length = 390

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +G  +  + I
Sbjct: 5   VRAVSMKATDGLMRGMDVIDTGDALTVPVGPATLGRIFNVLGEPVDNLGPVGNKEG-LPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVINEDNISESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+ +L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGKLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +E      ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEEHYACAQNVKETLQRYKELQDIIAILGLDELSEDD-RLVVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|62318463|dbj|BAD94439.1| beta subunit of F1F0-ATP synthase [Acidithiobacillus ferrooxidans]
          Length = 468

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 108/404 (26%), Positives = 182/404 (45%), Gaps = 12/404 (2%)

Query: 24  GYISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82
           G+I  +      +     Q   + + +V    N     Q  ++   +     +G+ E + 
Sbjct: 11  GHIVQVIGPGIDIAFSRGQVPEIMEAIVVDANNLTIEVQA-QLGDGVARGIAMGLSEGLK 69

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR++N LG+P+DG   +   D    I    P        
Sbjct: 70  RGLAVTRTGAPISVPVGHATLGRIMNVLGEPVDGKGPVQTQD-RQAIHRPAPAFDELAAS 128

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198
            +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +    S+   VGER
Sbjct: 129 TEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVFMMEMIRNIAIEHTGYSVCAGVGER 188

Query: 199 GREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
            RE  +F  +     +  K  +V    +E P  R  A LT +T+A  F  +G ++L+ +D
Sbjct: 189 TREGNDFYHEMTDSGVLDKVALVNGQMNEPPRNRLRAGLTGLTMAASFRDEGRDILMFID 248

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           +I R+  +  E++   G +P A GY  ++  E+ +L ERI  +  + G+IT+V +V V  
Sbjct: 249 NIFRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPA 306

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSL 376
           D   DP   +  + LD  +VL+R +AE G YP +DPL S SR  D      +   +  S 
Sbjct: 307 DYLTDPSPATTFAHLDATVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSC 366

Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +  ++E +DI  I G     +      V +   I  +L Q 
Sbjct: 367 QKTLQPYKELQDIIAILGMDELSEDD-KLLVSRARKIQRYLSQP 409


>gi|11559342|dbj|BAB18829.1| ATP synthase beta-subunit [Volvulina boldii]
          Length = 376

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMDVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMG-IVKVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|255720819|ref|XP_002545344.1| ATP synthase beta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240135833|gb|EER35386.1| ATP synthase beta chain, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 415

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/375 (28%), Positives = 174/375 (46%), Gaps = 19/375 (5%)

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+IN +G+PID    + +      I ++ P
Sbjct: 1   MDGTEGLVRGTAVTDTGAPISVPVGRGTLGRIINVVGEPIDDRGPI-ECKERKPIHAEPP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S
Sbjct: 60  SFVEQSTAAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFS 119

Query: 194 L---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +   VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEY
Sbjct: 120 VFTGVGERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEY 179

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 180 FRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTK 237

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D 
Sbjct: 238 KGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDA 297

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +   + + +   +  ++  +DI  I G     +      V +   I  FL Q   
Sbjct: 298 TVVGQEHYDVATGVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP-- 354

Query: 423 DLSSEDVFQEITKKL 437
             +  +VF  I  +L
Sbjct: 355 -FAVAEVFTGIPGRL 368


>gi|71277388|gb|AAZ29874.1| ATP synthase beta subunit [Lychnothamnus barbatus]
          Length = 359

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 100/357 (28%), Positives = 162/357 (45%), Gaps = 18/357 (5%)

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GR+ N LG+P+D    +    ++  I    P   
Sbjct: 3   TDGLMRGMEVIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVDTT-ITFPIHRSAPAFT 61

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
                   F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 62  QLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 121

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +   +               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 122 GVGERTREGNDLYMEMKESKVINQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYF 181

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++
Sbjct: 182 RDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKE 239

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +    
Sbjct: 240 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPW 299

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 300 IVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 355


>gi|113910942|gb|ABI48203.1| ATPase beta subunit [Polypodium polycarpon]
          Length = 449

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + +  G      G    +       GR+ N LG
Sbjct: 18  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLMRGMSAIDTGAPLSVPVGETTLGRIFNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +G  +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPV-QGSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +DSI RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDSIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLIDPAPATTSAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 375 LSEED-RLTVARARKIERFLSQP 396


>gi|268319739|ref|YP_003293395.1| ATP synthase F1, beta subunit [Lactobacillus johnsonii FI9785]
 gi|262398114|emb|CAX67128.1| ATP synthase F1, beta subunit [Lactobacillus johnsonii FI9785]
          Length = 480

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 119/410 (29%), Positives = 193/410 (47%), Gaps = 18/410 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD----IVYICPVGI 77
           G I  +      V   L + +  + + +     N D L  V+ + L+    ++    +  
Sbjct: 4   GEIVQVIGPVVDVEFPLDKDLPDINNALRVTNSNGDTL--VLEVTLELGDGVLRTISMES 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG PIDG  +LGK      I  + P   
Sbjct: 62  TDGLRRGMEVEDTGAPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKREGIHKEAPKYD 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                E+  +TGI+VID+  P   G ++G+F G+G+GK+T++     +   +   IS+  
Sbjct: 122 ELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFT 181

Query: 195 -VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +     +  K+ +V    +E P  R    LT +TIAEYF      +
Sbjct: 182 GVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLD 241

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ 
Sbjct: 242 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQ 299

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D++ DP   +  + LD    L R L E+G YP VDPL S S   D      +  
Sbjct: 300 AVYVPADDYTDPAPATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHY 359

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   + H++ R++E +DI  + G     D      V +   I  FL Q+
Sbjct: 360 EVAVKVQHILQRYQELQDIISVLGMDELSDDE-KLIVERARKIQFFLSQN 408


>gi|238881792|gb|EEQ45430.1| ATP synthase beta chain, mitochondrial precursor [Candida albicans
           WO-1]
          Length = 415

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 19/375 (5%)

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G  V   G    +       GR+IN +G+PID    +   +    I ++ P
Sbjct: 1   MDGTEGLVRGTEVNDTGAPISVPVGRGTLGRIINVVGEPIDDRGPIECKEKK-PIHAEPP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + +    +  +TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S
Sbjct: 60  SFVEQSTAAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFS 119

Query: 194 L---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +   VGER RE  +   +         +   K  +V    +E P  R    LT +TIAEY
Sbjct: 120 VFTGVGERTREGNDLYREMKETGVINLEGDSKVALVFGQMNEPPGARARVALTGLTIAEY 179

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 180 FRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTK 237

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG++T+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SRL D 
Sbjct: 238 KGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDA 297

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
           +    +   + + +   +  ++  +DI  I G     +      V +   I  FL Q   
Sbjct: 298 SVVGQEHYDVATGVQQTLQAYKSLQDIIAILGMDELSEAD-KLTVERARKIQRFLSQP-- 354

Query: 423 DLSSEDVFQEITKKL 437
             +  +VF  I  +L
Sbjct: 355 -FAVAEVFTGIPGRL 368


>gi|32490755|ref|NP_871009.1| F0F1 ATP synthase subunit alpha [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|81741897|sp|Q8D3J5|ATPA_WIGBR RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP
           synthase F1 sector subunit alpha; AltName: Full=F-ATPase
           subunit alpha
 gi|25165961|dbj|BAC24152.1| atpA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 510

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 21/386 (5%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116
                + +  +IV    +G    +S G  V+  GR    P      GRV+NALG+P+D  
Sbjct: 59  TFAIALNLEKEIVGAVVMGSYFHLSEGMKVYSTGRILEVPTGNNLLGRVLNALGEPLDSK 118

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS- 175
             +   D    I +  P  ++R  + +  +TG + ID   P+  GQR  +      GKS 
Sbjct: 119 GDIL-HDCFSPIETIAPGVIDRLSINEPLQTGYKSIDSMVPIGKGQRELIIGDRQTGKSS 177

Query: 176 -TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
             + ++  + D   K I   +G++   V + +E     D L  +++V AT+ +S +L+ +
Sbjct: 178 LAIDTIINQKDSNIKCIYVSIGQKFSTVVKTVEKLKEHDALSNTIIVCATASDSAVLQYL 237

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP +  T+ EYF  +G++ L++ D +++ A + R+I+      P    YP  +F    RL
Sbjct: 238 APYSGCTMGEYFRDRGEDSLIVYDDLSKQAIAYRQISLLLRRPPGREAYPGDIFYLHSRL 297

Query: 294 LER-------------IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           LER              G  + + G++TA+  V   G + +  +  ++ SI DG I L  
Sbjct: 298 LERSARVNEIYVENFTKGKVKNKSGSLTALPIVETQGGDISSFVPTNLISITDGQIFLES 357

Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400
           +L   G  P ++P  SVSR+   A +   +KL  ++   + ++ E   +     +   +D
Sbjct: 358 NLFNSGIRPAINPGISVSRVGGSAQTEIIRKLSGNIRTSLAQYNE---LSSFAQFSSDLD 414

Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426
               K +     I + LKQ      S
Sbjct: 415 DSTKKQLQHGEKIIEILKQKQYSPMS 440


>gi|302747460|gb|ADL63211.1| Atp1 [Frankenia pulverulenta]
          Length = 338

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 16/338 (4%)

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118
           G  + +  + V I   G    I  GDLV   G     P      GRV++ LG PIDG  +
Sbjct: 2   GIALILENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKALLGRVVDGLGVPIDGKGA 61

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ + 
Sbjct: 62  LSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIA 120

Query: 179 SMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDE 226
                +                 +   +G++   V + ++    G+ L+ S++V AT+ +
Sbjct: 121 IDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEGNALEYSILVAATASD 180

Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
              L+ +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  V
Sbjct: 181 PAPLQFIAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDV 240

Query: 287 FSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           F    RLLER      +   G++TA+  +     + +  I  +V SI DG I L   L  
Sbjct: 241 FYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFY 300

Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
            G  P ++   SVSR+   A     KK+  SL   + +
Sbjct: 301 RGIRPAINVGLSVSRVGSAAQLKAMKKVRGSLKLELAQ 338


>gi|312898813|ref|ZP_07758201.1| ATP synthase F1, beta subunit [Megasphaera micronuciformis F0359]
 gi|310619975|gb|EFQ03547.1| ATP synthase F1, beta subunit [Megasphaera micronuciformis F0359]
          Length = 472

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 187/412 (45%), Gaps = 17/412 (4%)

Query: 23  GGYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSD----NLGQVIR-INLDIVYICPV 75
            G +  +      V  +       +   +   G   D     + +V++ +  D+V    +
Sbjct: 5   FGKVIQVIGPVIDVRFSVEKDLPPIYTAIRITGGEGDQTVNLVAEVMQHLGDDVVRCVAM 64

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G    + G   R+       GR+ N LG+ +D  D   K +    I    P 
Sbjct: 65  SSTDGLVRGMAAENTGAPIRVPVGQGVLGRIFNVLGEAVDKVDEPVKAEDYWPIHRPAPK 124

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
             +     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +    S+
Sbjct: 125 FDDLSPTMEILETGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIMELIHNVATEHGGYSV 184

Query: 195 ---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
              VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF   + 
Sbjct: 185 FTGVGERTREGNDLWNEMKESGVISKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDKEH 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT+
Sbjct: 245 QDVLLFVDNIFRFIQAGSEVSALLGRIPSAVGYQPTLGTDVGALQERI--TSTKEGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +
Sbjct: 303 VQAVYVPADDLTDPAPAATFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPHIIGEE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +    +  ++ ++++ +DI  I G     +      V +   +  FL Q 
Sbjct: 363 HYETAREVQAILQKYKDLQDIIAILGIDELSEDD-KLTVARARKVQRFLSQP 413


>gi|116513801|ref|YP_812707.1| F0F1 ATP synthase subunit beta [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275429|sp|Q04BA3|ATPB_LACDB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116093116|gb|ABJ58269.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
          Length = 479

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 178/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIV-YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V +  +   + +VI    D V     +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDDSIILEVILEQGDGVLRCIAMESTDGLRRGMKVEDTGSSISVPVGPDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG            I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +   + + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KLIVARARRIQFFLSQN 408


>gi|300811317|ref|ZP_07091814.1| ATP synthase F1, beta subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497681|gb|EFK32706.1| ATP synthase F1, beta subunit [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 479

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 177/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIV-YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           V +  +   + +V     D V     +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDDSIILEVTLEQGDGVLRCIAMESTDGLRRGMKVEDTGSSISVPVGPDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG            I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPEFPAAHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +   + + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KLIVARARRIQFFLSQN 408


>gi|227889723|ref|ZP_04007528.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii ATCC 33200]
 gi|227849587|gb|EEJ59673.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii ATCC 33200]
          Length = 480

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 119/410 (29%), Positives = 193/410 (47%), Gaps = 18/410 (4%)

Query: 24  GYISSITSVYYTVTC-LSQYVC-LGDFVVHQGKNSDNLGQVIRINLD----IVYICPVGI 77
           G I  +      V   L + +  + + +     N D L  V+ + L+    ++    +  
Sbjct: 4   GEIVQVIGPVVDVEFPLDKDLPDINNALRVTNNNGDTL--VLEVTLELGDGVLRTISMES 61

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V   G    +       GRV N LG PIDG  +LGK      I  + P   
Sbjct: 62  TDGLRRGMEVEDTGGPISVPVGKDTLGRVFNVLGDPIDGGPALGKDVKREGIHKEAPKYD 121

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                E+  +TGI+VID+  P   G ++G+F G+G+GK+T++     +   +   IS+  
Sbjct: 122 ELSTSEEILETGIKVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFT 181

Query: 195 -VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +     +  K+ +V    +E P  R    LT +TIAEYF      +
Sbjct: 182 GVGERTREGNDLYFEMKASGVLSKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLD 241

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+IT++ 
Sbjct: 242 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQ 299

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D++ DP   +  + LD    L R L E+G YP VDPL S S   D      +  
Sbjct: 300 AVYVPADDYTDPAPATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHY 359

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   + H++ R++E +DI  + G     D      V +   I  FL Q+
Sbjct: 360 EVAVKVQHILQRYQELQDIISVLGMDELSDDE-KLIVERARKIQFFLSQN 408


>gi|153811246|ref|ZP_01963914.1| hypothetical protein RUMOBE_01638 [Ruminococcus obeum ATCC 29174]
 gi|149832744|gb|EDM87828.1| hypothetical protein RUMOBE_01638 [Ruminococcus obeum ATCC 29174]
          Length = 456

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 95/383 (24%), Positives = 160/383 (41%), Gaps = 13/383 (3%)

Query: 44  CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWC 102
             G+ VV +       G V  I  + +     G    I  G  V   G+   I     + 
Sbjct: 1   MYGEVVVFENG---LKGMVQDIRTNSMGCILFGKDTGIKEGTKVTRTGKQAGIPVGNGYV 57

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR++NALG PIDG   + K +    + +  P  ++R+ V    +TGI  +D   P+  GQ
Sbjct: 58  GRIVNALGAPIDGKGEI-KEEGYRPVENPAPGIIDRKSVTVPLETGILSLDSMFPIGRGQ 116

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219
           R  +      GK++L      +        I   +G++   V + + +         + V
Sbjct: 117 RELIIGDRQTGKTSLAIDTILNQKGKDVICIYVAIGQKASTVAKVVSNLEKYGAMEYTTV 176

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279
             +T+ +   L+ +AP     +AE+F  +G +VL++ D +++ A + R ++      P  
Sbjct: 177 FSSTASDCAPLQYIAPYAGTALAEFFMYQGKDVLIVYDDLSKHAVAYRALSLLLERSPGR 236

Query: 280 RGYPTSVFSELPRLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
             YP  VF    RLLER      EK  G+ITA+  +     + +  I  +V SI DG I 
Sbjct: 237 EAYPGDVFYLHSRLLERSSRLSDEKGGGSITALPIIETQAGDVSAYIPTNVISITDGQIF 296

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           L   L   G  P V+   SVSR+   A +   KK   S+   + ++ E     +   +  
Sbjct: 297 LESDLFFSGMRPAVNVGLSVSRVGGAAQTKAMKKASGSVRIDLAQYREME---VFTQFSS 353

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
            +D      +     + + LKQ 
Sbjct: 354 DLDEATKAQLAYGGCLMELLKQP 376


>gi|114762051|ref|ZP_01441519.1| F0F1 ATP synthase subunit beta [Pelagibaca bermudensis HTCC2601]
 gi|114545075|gb|EAU48078.1| F0F1 ATP synthase subunit beta [Roseovarius sp. HTCC2601]
          Length = 474

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 20/417 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G ++ +      V        + + +         + +V   +    V    +   E + 
Sbjct: 6   GKVTQVIGAVVDVQFDDHLPEILNALTTTNDGKTLVLEVAQHLGESTVRTIAMDSTEGLV 65

Query: 83  LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V        +       GR++N +G+P+D    + + +    I    P    +   
Sbjct: 66  RGQEVVDTDKPISVPVGNATLGRILNVVGEPVDEQGPV-EAEEYRAIHQPAPEFDEQATD 124

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
            +   TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 125 TEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 184

Query: 199 GREVREFIEDYLGDNLKK--------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
            RE  +   + +  N+ K          +V    +E P  R    LT +T+AE F  +  
Sbjct: 185 TREGNDLYHEMIESNVIKPDNLSDSQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSG 244

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  + G+IT+
Sbjct: 245 TDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITS 302

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSAD 368
           + +V V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SR+ D      +
Sbjct: 303 IQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSNSRILDPQVVGQE 362

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
              +   +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 HYDVAREVQGILQRYKSLQDIIAILGMDELSEED-KLTVQRARKIQRFLSQ-PFDVA 417


>gi|21684901|emb|CAD11577.1| ATP synthase beta subunit [Luzula multiflora]
          Length = 485

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS-----DNLGQVIRI-NLDIVYICPVG 76
           G+I+ I      V   S+ V  + + +V +G++S     +   +V ++   D V    + 
Sbjct: 11  GHITQIIGPVLDVVFASEKVPNIYNALVVKGRDSSDQDINVTCEVQQLLGNDQVRAVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+PID   S+        I    P  
Sbjct: 71  ATDGLRRGMEVIDTGAALSVPVGRVTLGRIFNVLGEPIDNLGSVDTS-TKFPIHRSAPLF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 IDLDTELSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTILIMELINNIAKGHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYVEMKESKVINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+    ERI  +   
Sbjct: 250 FRDVNKQHVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSFQERI--TSTN 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V PL S S +   
Sbjct: 308 RGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRVLASKGIYPAVSPLESTSTMLQP 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +     R++E +DI  + G     +      V +   I  FL Q 
Sbjct: 368 EIVGEEHYETAQRVKQTSQRYKELQDIIAVLGLDELSEED-RLTVARTRKIERFLSQP 424


>gi|302747648|gb|ADL63305.1| Atp1 [Sphenostemon lobosporus]
          Length = 349

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  D V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENDNVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|306996343|gb|ADN21391.1| ATP synthase beta subunit [Rhizobium gallicum]
          Length = 378

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 170/369 (46%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G    +       GR++N +G+P+D    L    
Sbjct: 12  LGENEVRTIAMDSSEGLVRGQEVVDTGAPISVPVGPETLGRIMNVIGEPVDEAGPLVTAS 71

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  + +    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 72  KRA-IHQDAPSYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 130

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   + +        G    K+ +V    +E P  R 
Sbjct: 131 NVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARA 190

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +
Sbjct: 191 RVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQ 250

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +     +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VD
Sbjct: 251 MQERITTTTTG--SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVD 308

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +  ++   +   + R++  +DI  I G     +     AV +  
Sbjct: 309 PLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQDIIAILGMDELSEED-KLAVARAR 367

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 368 KIERFLSQP 376


>gi|150187274|emb|CAK30213.1| ATP synthase alpha subunit [Streptococcus gallinaceus]
          Length = 367

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 163/375 (43%), Gaps = 14/375 (3%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
              V  L   +  G+ +V +      +G    +    V I  +G   +I  G +V   G+
Sbjct: 1   IARVHGLDNAMS-GELLVFENG---TIGMAQNLETSDVGIIILGEFTDIREGSIVRRTGK 56

Query: 93  FR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
              +       GRV++ LG+P+DG   + +   +  I +  P  M R+ V +  +TG++ 
Sbjct: 57  IMEVPVGPALIGRVVDPLGQPVDGLGEV-RTTKTRPIEAPAPGVMQRKSVNQPLQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209
           ID   P+  GQR  +      GK+   + ++  + D     I   +G++   VR  +E  
Sbjct: 116 IDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKDQDMICIYVAIGQKESTVRTQVETL 175

Query: 210 LGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
                   ++VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE
Sbjct: 176 RQYGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYEGKHVLIVYDDLSKQAVAYRE 235

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIAD 326
           ++      P    YP  VF    RLLER      E   G+ITA+  +     + +  IA 
Sbjct: 236 LSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIAT 295

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P +D  +SVSR+   A     KK+  +L   +  F E 
Sbjct: 296 NVISITDGQIFLKDDLFNSGIRPAIDAGSSVSRVGGAAQIKAMKKVAGTLRIDLASFREL 355

Query: 387 RDIRLIGGYRPGVDL 401
                   +   +D 
Sbjct: 356 E---AFTQFGSDLDA 367


>gi|302747496|gb|ADL63229.1| Atp1 [Hydrastis canadensis]
          Length = 349

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V          G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFACG---VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDTLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++  +SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|195019846|ref|XP_001985067.1| GH16852 [Drosophila grimshawi]
 gi|193898549|gb|EDV97415.1| GH16852 [Drosophila grimshawi]
          Length = 659

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 173/380 (45%), Gaps = 20/380 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G   R++      GR++N +G PID    + K +
Sbjct: 165 LGNNTVRCVAMDATEGLRRGQKVIDTGFPIRVAVGKSVLGRIVNVVGDPIDERGEI-KSE 223

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P         +   TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 224 FYSFIHNEPPDLQELSVKPEVLVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELIN 283

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKM 233
           +         +    GER RE  +   + +        D+  K  +V    +E P  R  
Sbjct: 284 NIAKSHGGYSVFVGAGERTREGNDLYYEMIESKVISLDDDTSKVALVYGQMNEPPGARNR 343

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 344 VVLTGLTIAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGA 403

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  S  + G+IT+V +V V  D+ +DP   +  S LD   VL+R +AE G YP VD
Sbjct: 404 MQERI--SSTKNGSITSVQAVYVPADDLSDPAPSATFSHLDATTVLSRPIAELGIYPAVD 461

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      D   +  ++   +  ++  +DI  I G     +      V +  
Sbjct: 462 PLDSSSRVLDPEVVGEDHYNVARAVQKTLQGYKSLQDIIAILGMDELSEED-KLTVARAR 520

Query: 412 IIYDFLKQSPSDLSSEDVFQ 431
            I  FL Q     S  ++F 
Sbjct: 521 KIQRFLSQP---FSVAEIFT 537


>gi|302747508|gb|ADL63235.1| Atp1 [Fouquieria columnaris]
          Length = 349

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGRAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|150187184|emb|CAK30189.1| ATP synthase alpha subunit [Streptococcus pneumoniae]
 gi|154424895|emb|CAL18550.1| ATP synthase alpha subunit [Streptococcus pneumoniae]
          Length = 366

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 13/369 (3%)

Query: 41  QYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSA 99
           + V  G+ +  +  +    G    +    V I  +G   +I  GD +   G+   +    
Sbjct: 5   ENVMSGELLNFENGS---YGMAQNLESTDVGIIILGDFTDIREGDTIRRTGKIMEVPVGE 61

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GRV++ LG+P+DG   +   D +  + +  P  M R+ V +  +TG++ ID   P+ 
Sbjct: 62  SLIGRVVDPLGRPVDGLGEI-HTDKTRPVEAPAPGVMQRKSVSEPLQTGLKAIDALVPIG 120

Query: 160 HGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KK 216
            GQR  +      GK+T+   ++  + D     I   +G++   VR  +E          
Sbjct: 121 RGQRELIIGDRQTGKTTIAIDTILNQKDQDMICIYVAIGQKESTVRTQVETLRQYGALDY 180

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276
           ++VV A++ +   L  +AP T V +AE F  +G +VL++ D +++ A + RE++      
Sbjct: 181 TIVVTASASQPSPLLFLAPYTGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRP 240

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDG 334
           P    +P  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG
Sbjct: 241 PGREAFPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDG 300

Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394
            I L   L   G  P +D  +SVSR+   A     KK+  +L   +  + E         
Sbjct: 301 QIFLGDGLFNAGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYRELE---AFTK 357

Query: 395 YRPGVDLIL 403
           +   +D   
Sbjct: 358 FGSDLDAAT 366


>gi|302747690|gb|ADL63326.1| Atp1 [Valeriana officinalis]
          Length = 348

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGVALNLENETVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKALLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK-----------VIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKLMNSRSTSESETLFCVYVAIGQKRSTVAQLVQILSEAN 176

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKIMKQVCGSLKLELAQ 348


>gi|291458276|ref|ZP_06597666.1| ATP synthase F1, alpha subunit [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291418809|gb|EFE92528.1| ATP synthase F1, alpha subunit [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 685

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 14/403 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G++ S+      +  L  +   G+ ++    +S   G V  I  D + +   G   +I+ 
Sbjct: 198 GFVESVGDGIVILDGL-DHAMYGEVILF---DSGVKGMVQNIERDRIGVILFGDEADIAE 253

Query: 84  GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G      G R  I     + GRVI+ALG P+DG   +   D    I    P  ++R+ V 
Sbjct: 254 GSRGIRTGKRAGIPVGDQYLGRVIDALGAPVDGLGQI-PADGYRAIEQPAPGIIDRKSVS 312

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGR 200
           +  +TGI  ID   P+  GQR  +      GK+++      +        +   +G++  
Sbjct: 313 EPLQTGILAIDSMFPIGRGQRELIIGDRQTGKTSIAVDTILNQKGKDCICVYVAIGQKES 372

Query: 201 EVREFIEDYLGDNLKKSVVVVA-TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
            +   +++    +      ++A T+ +   ++ +AP +A +++EYF  KG +VL++ D +
Sbjct: 373 TIASLVDNLKKHDAMDYCCIMAATAADPASIQYIAPYSATSLSEYFMEKGKDVLIVYDDL 432

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDG 317
           ++ A + R ++   G  P    YP  VF    RLLER     +E   G+ITA+  +    
Sbjct: 433 SKHAVAYRALSLLLGRAPGREAYPGDVFYLHSRLLERSCRLSEEHGGGSITALPIIETLD 492

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
            + +  I  +V SI DG I L  SL   G+ P V+   SVSR+   A +   KK   SL 
Sbjct: 493 GDVSAYIPTNVISITDGQIFLESSLFFSGQRPAVNVGLSVSRVGGAAQAKAMKKASGSLR 552

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             + ++ E   + +   +   +D    + + Q  I+ + LKQ 
Sbjct: 553 IDLAQYRE---MAVFTQFSSDLDEGTKEQLAQGKILMELLKQP 592


>gi|260888964|ref|ZP_05900227.1| ATP synthase F1, beta subunit [Leptotrichia hofstadii F0254]
 gi|260861411|gb|EEX75911.1| ATP synthase F1, beta subunit [Leptotrichia hofstadii F0254]
          Length = 465

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 184/406 (45%), Gaps = 12/406 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIV-YICPVGIGEEI 81
           G +  +      V    +   + + +    +N + L  +V   N + V     +   E +
Sbjct: 4   GKLVQVIGPVIDVKFEKKLPDIYNALEVYKENGEKLVAEVHAHNGNNVVRAVAMSGTEGL 63

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G   ++       GR+ N LG+ +D  + L    L   I    P    +  
Sbjct: 64  RRGLEVVDTGNPIQVPVGRATLGRIFNVLGEAVDDGEKLDADVLRESIHKDAPSFEQQGT 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 124 DSEILETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGE 183

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE R+   +      + K+ +V    +E P  R    LTA+T+AEYF  K   NVLL 
Sbjct: 184 RTREGRDLYNEMTESGVIDKTALVYGQMNEPPGARLRVGLTALTMAEYFRDKEGQNVLLF 243

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +     +IT+V +V V
Sbjct: 244 IDNIFRFTQAGSEVSALLGRMPSAVGYQPNLATEMGALQERITSTSTG--SITSVQAVYV 301

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+R +A  G YP VDPL S SR+ +      +  K+  
Sbjct: 302 PADDLTDPAPATTFAHLDATTVLSRQIASLGIYPAVDPLDSTSRILEPEIVGNEHYKIAR 361

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               ++ R++E +DI  I G    +D      V++   I  F  Q 
Sbjct: 362 ETQKVLQRYKELQDIIAILGMDE-LDENDKLTVNRARKIQRFFSQP 406


>gi|94495432|ref|ZP_01302012.1| ATPase FliI/YscN [Sphingomonas sp. SKA58]
 gi|94424820|gb|EAT09841.1| ATPase FliI/YscN [Sphingomonas sp. SKA58]
          Length = 442

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 142/410 (34%), Positives = 217/410 (52%), Gaps = 3/410 (0%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G + S  +    VT   + +  G  V+     S    +V+    D   + P+     
Sbjct: 24  RHVGRLVSHDAGMLEVTGFRRPIGSGARVLA-SDGSVCRAEVVGFRGDRTLLVPLDADAP 82

Query: 81  ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V    +   +       GRVI+A+G+P+D    +  G  +  +       ++R 
Sbjct: 83  LENGIRVEPDSQANMVQVGDGLIGRVIDAMGQPLDRKGPIITG-GTWPLNGVKGNVLDRG 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           RV + F  G+R ++       GQRI + AGSG+GKS L+         D V+  L+GERG
Sbjct: 142 RVTEPFDLGVRAVNALLTAGRGQRIAIIAGSGVGKSVLMGQMIAGAEADIVVTGLIGERG 201

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV +F+E  L + + KS+VV   +D  P+LR  A   A  IAEYF ++G  VLL++DS+
Sbjct: 202 REVSDFLETKLKNAMHKSIVVAVPADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSL 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR AH+ REI    GE P  +GYP S  + +PRL+ER G   +  G+ITA+ +VL DGD+
Sbjct: 262 TRCAHAQREIGLALGEPPAMKGYPPSALALIPRLVERAGVDARTGGSITALYTVLADGDD 321

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPI D+ R+I+DGH VL+R L+E+  +P +D   S+SR+       D ++  +    L
Sbjct: 322 TDDPIVDAARAIVDGHFVLSRQLSEQAIFPAIDIGKSLSRVMADVVPDDHRQAAAGYRRL 381

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
              +EE RD+ L+G YRPG D ++D+AV +   I DF++Q        D 
Sbjct: 382 WAAYEENRDLILMGAYRPGNDPVIDEAVKRRQEILDFIRQDQKSRIDLDT 431


>gi|20467361|gb|AAL27811.1| ATPase beta subunit [Ephedra gerardiana]
          Length = 429

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 16  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 75

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 76  EPVDDLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 134

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 135 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIIXSKVAL 194

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 195 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 254

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 255 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 312

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 313 SRGLAAKGIYPAVDPLDSTSTMXQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 372

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 373 LSEKD-RLTVARARKIERFLSQP 394


>gi|119350537|gb|ABL63219.1| AtpB [Pseudobohlinia americana]
          Length = 390

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 165/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +   +  + I
Sbjct: 2   VRAVSMNATDGLMRGMDVIDTGNPLTVPVGKPTLGRIFNVLGEPVDNLGPVEATEG-LPI 60

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 61  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 120

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 121 HGGVSVFGGVGERTREGNDLYTEMKESGVINEKNLIESKVALVYGQMNEPPGARMRVGLT 180

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 181 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 240

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 241 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 298

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 299 TSTMLQPWIVGEEHYECAQNVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIER 357

Query: 416 FLKQS 420
           FL Q 
Sbjct: 358 FLSQP 362


>gi|284931521|gb|ADC31459.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str. F]
          Length = 471

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 10/363 (2%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  DI     +G  E ++    V        +       GR+ N +G+PID    +    
Sbjct: 52  IGDDIARCIAMGPTEGLARNVKVTSTNQPISVPVGTEVLGRMFNVIGEPIDEKKPIDASV 111

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             M I    P   ++    + F+TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 112 KRMSIHRPAPSFADQSNELEIFETGIKVIDLLIPYAKGGKIGLFGGAGVGKTVLVQELIH 171

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239
           +         + + VGER RE  +   + +    + K+ +V    +E P  R    LT +
Sbjct: 172 NIATGHGGLSVFAGVGERTREGNDLYYEMIEGGVIDKTALVFGQMNEPPGARMRVALTGL 231

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  E+  L ERI 
Sbjct: 232 TMAEYFRDVNNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLAEEMGSLQERI- 290

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R++A  G +P V+PL S S
Sbjct: 291 -TSTKSGSITSVQAIYVPADDLTDPAPSTTFTHLDAKTVLDRNVASLGIFPAVNPLDSTS 349

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           RL D +       +    +  ++ +F E +DI  I G     +      V +   I +FL
Sbjct: 350 RLLDPSVVGIQHYQTARKVQMILQKFLELQDIIAILGIDELSEED-KLTVSRARKIRNFL 408

Query: 418 KQS 420
            Q 
Sbjct: 409 SQP 411


>gi|95928950|ref|ZP_01311695.1| ATP synthase F1, alpha subunit [Desulfuromonas acetoxidans DSM 684]
 gi|95134851|gb|EAT16505.1| ATP synthase F1, alpha subunit [Desulfuromonas acetoxidans DSM 684]
          Length = 506

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/425 (24%), Positives = 176/425 (41%), Gaps = 14/425 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           + + G ++++++    +  L   V   + V          G    ++ D V +  +G  +
Sbjct: 29  IRESGRVTTVSTGIAKINGL-PGVGAEERVEFP---HGIEGIAFNVDADEVGVVLLGDYQ 84

Query: 80  EISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  GD     GR   +       GRVIN LG P+D    +      + I    P  M R
Sbjct: 85  YLHTGDEARRSGRVMDVPVGETLIGRVINPLGAPLDQQGPVN-NQHRLPIERPAPAIMER 143

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVG 196
             V     TGI+V+D   P+  GQR  +      GK+ +      +      + +   +G
Sbjct: 144 APVTTPLHTGIKVVDALVPIGRGQRELILGDRQTGKTAIAIDTILNQKGKNVRCVYCAIG 203

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           +R   V   I +         +VV+VA  ++ P L  +AP  A TIAE F  +GD+VL++
Sbjct: 204 QRSAAVARVIAELERRGAMDYTVVMVAEGNDPPGLSYIAPYAATTIAEEFMRQGDDVLIV 263

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS--EKEKGNITAVISV 313
            D +T  A + RE++      P    +P  +F    RLLER      +   G++TA+  +
Sbjct: 264 YDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERATHLHPDHGGGSLTALPII 323

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
             +  N +  I  ++ SI DG + L+ +L E G  P +D   SVSR+  KA     +++ 
Sbjct: 324 ETEAQNMSAYIPTNLISITDGQLYLSPTLFELGALPAIDVGKSVSRVGGKAQLEAYRRIA 383

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
            +L     +FEE       G     +D      ++    I   LKQ      S      +
Sbjct: 384 GNLKLAYAQFEELETFARFG---TRLDESTQATINHGRRIRACLKQQQYSPVSVIEQLGV 440

Query: 434 TKKLQ 438
            + L 
Sbjct: 441 LQALN 445


>gi|113910940|gb|ABI48202.1| ATPase beta subunit [Nephrolepis biserrata var. furcans]
          Length = 449

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 102/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + +  G      G    +       GR
Sbjct: 12  KGKNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGR 71

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    + +   +  I    P           F+TGI+V+D+  P   G +I
Sbjct: 72  IFNVLGEPVDNLGPV-QSSTTFPIHRSAPAFTQLDTELSIFETGIKVVDLLAPYRRGGKI 130

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 131 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 190

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+A YF      +VLL +D+I RF  +  E++  
Sbjct: 191 ESKVALVYGQMNEPPGARMRVGLTALTMAGYFRDVNNQDVLLFIDNIFRFVQAGSEVSAL 250

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L  RI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 251 LGRMPSAVGYQPTLGTEMGSLQGRI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 308

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 309 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 368

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 369 ILGLDELSEED-RLTVARARKIERFLSQP 396


>gi|71842251|ref|YP_277339.1| ATP synthase CF1 beta subunit [Emiliania huxleyi]
 gi|118573534|sp|Q4G3C8|ATPB_EMIHU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|52547728|gb|AAU81899.1| ATP synthase CF1 beta chain [Emiliania huxleyi]
 gi|60101494|gb|AAX13838.1| ATP synthase CF1 beta subunit [Emiliania huxleyi]
          Length = 476

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 108/419 (25%), Positives = 183/419 (43%), Gaps = 20/419 (4%)

Query: 18  NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRI-NLDIVYICPV 75
           +   + G+IS I      V      +      +  G+   ++  +V ++   + V    +
Sbjct: 3   DTASKTGFISQIIGPVVDVEFPGGELPTVYSAIVVGEGESSVTCEVQQLLGSNKVRAVSM 62

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V + G    +       GR+ N LG+P+D      +    + I    P 
Sbjct: 63  TSTDGLKRGAAVVNTGAPITVPVGVPTLGRIFNVLGEPVDEMGP-CEATAGLPIHRAAPA 121

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
             +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 122 FTDLDTKPSVFETGIKVVDLLAPYKRGGKIGLFGGAGVGKTVLIMELINNIARAHGGVSV 181

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 182 FGGVGERTREGNDLYAEMKESGVIDEKKLDNSKVALVYGQMNEPPGARMRVGLTALTMAE 241

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  
Sbjct: 242 YFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGVLQERI--TST 299

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
            +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 300 TEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQ 359

Query: 363 K-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                A+      ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 360 PEIVGAEHYATAQNIKETLQRYKELQDIIAILGLDELSEED-RLTVARARKVERFLSQP 417


>gi|116256390|dbj|BAF35226.1| ATP synthase beta subunit [Volvox dissipatrix]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVIDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVI-VEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDRAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|14718155|gb|AAK72816.1| ATP synthase beta subunit [Osyris lanceolata]
          Length = 470

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V  G     +GQ+I +  ++        V    
Sbjct: 1   GRIAQIIGPVLDVSFPPGKMPNIYNALVVXG--RXTMGQLINVTCEVQQLLGNXXVXAIA 58

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V   G    +       GR+ N LG P+     +     S  I    P
Sbjct: 59  MXATXGLMRGMEVIDTGAPLSVPVGEATLGRIFNVLGXPVXNLGPVDTCTTS-PIHKSAP 117

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P  HG +IG+F G+G+GK+ L+     +       +S
Sbjct: 118 AFIQLDTKFSIFETGIKVVDLLAPYRHGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 177

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 178 VFGGVGERTREGNDLYMEMKESGVINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 237

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 238 EYFRDINEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 295

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 296 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 355

Query: 362 DKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 QPRILGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 414


>gi|28188327|gb|AAL92543.1| ATP synthase beta subunit [Coleochaete pulvinata]
          Length = 396

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVSMSATDGLMRGMDAIDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVDST- 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  VTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|327385389|gb|AEA56863.1| F1F0-ATPase subunit beta [Lactobacillus casei BD-II]
          Length = 587

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 48  FVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             V +   S  + +V + +   ++    +   + +     V   G    +       GRV
Sbjct: 132 LTVAKKDGSQLVLEVALELGDGVMRTIAMDSTDGLQRNMAVQDTGGPISVPVGKDTLGRV 191

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG PIDG ++ G       I    P   +     +  +TGI+VID+  P   G ++G
Sbjct: 192 FNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGGKVG 251

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVV 221
           +F G+G+GK+ L+     +   +   IS+   VGER RE  +   +     + + + +V 
Sbjct: 252 LFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENTAMVF 311

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A 
Sbjct: 312 GQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 371

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R
Sbjct: 372 GYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLER 429

Query: 341 SLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            L E+G YP VDPL +S S L  +    +  K+ + +  ++ R+ E +DI  I G     
Sbjct: 430 RLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDIISILGMDELS 489

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  FL Q+
Sbjct: 490 DEE-KVVVARARRIQFFLSQN 509


>gi|149384377|gb|ABR25011.1| ATP synthase beta chain [Anemia tomentosa]
          Length = 426

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMSVTDTGAPLSVPVGEITLGRIFNVLGEPVDNLGPVDSS- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLFGGAGVGKTVPITELIN 119

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV-----------VVATSDESPILRK 232
           +       +S+ G  G   RE  + Y+     K +            V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQNVSESKVALVHGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VL  +D+I RF  +  E++ + G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEVSASLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDESSEED-RLTVSRA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|116512623|ref|YP_811530.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123125393|sp|Q02XA5|ATPB_LACLS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116108277|gb|ABJ73417.1| ATP synthase F1 subcomplex beta subunit [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 469

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 111/415 (26%), Positives = 187/415 (45%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNS----DNLGQVIRINLDIVYI 72
           +  G I+ +      V        L +     +V++  N       L   + +    V  
Sbjct: 1   MSSGKITQVIGPVVDVE-FGSDAKLPEINNALIVYKDVNGLKTKITLEVALELGDGAVRT 59

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + ++ G  V   G+   +       GRV N LG  IDG +          I  K
Sbjct: 60  IAMESTDGLTRGLEVLDTGKAVSVPVGESTLGRVFNVLGDVIDGGEDFPADAERNPIHKK 119

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P         +   TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +   
Sbjct: 120 APTFDELSTANEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGG 179

Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           IS+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF  
Sbjct: 180 ISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+
Sbjct: 240 VQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365
           +T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR +  +  
Sbjct: 298 VTSIQAIYVPADDYTDPAPATAFAHLDATTNLERRLTQMGIYPAVDPLASSSRAITPEIV 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q+
Sbjct: 358 GEEHYEVAMEVQRVLQRYKELQDIIAILGMDELSDDE-KILVGRARRIQFFLSQN 411


>gi|251771544|gb|EES52121.1| ATP synthase F1, beta subunit [Leptospirillum ferrodiazotrophum]
          Length = 462

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 12/407 (2%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           +Q G I  +      V    +       +V +G       Q  ++    V    +G  + 
Sbjct: 1   MQTGEIVQVIGPVVDVRFEGELPGTYVALVVEGSGLILETQ-QQLGESTVRTIAMGSTDG 59

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G+   +       GR+++ LG PID    +   +    I    P      
Sbjct: 60  LVRGTKVTSTGKPIMVPVGQKVLGRMMDVLGAPIDDGGPIS-TEHMRPIHVDPPAFDELA 118

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
              + F+TGI+V+D+  P   G + G+F G+G+GK+ ++    R+   +     + + VG
Sbjct: 119 SATEVFETGIKVVDLIAPFAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGVG 178

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  +   +      + K+ +V    +E P +R    LT +  AE+F  +   +VL 
Sbjct: 179 ERTREGNDLWNEMNESKVIDKTSLVYGQMNEPPGVRLRVALTGLAQAEFFRDEENRDVLF 238

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++  E+ +L ERI  +  +KG+IT+V +V 
Sbjct: 239 FVDNIFRFTLAGAEVSALLGRMPSAVGYQPTLAVEMGQLQERI--TSTKKGSITSVQAVY 296

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR+ D      +   + 
Sbjct: 297 VPADDLTDPAPATTFTHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPMIIGEEHYNVA 356

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   + ++++ +DI  I G     +    + V +   I  FL Q 
Sbjct: 357 RAVQKTLQKYKDLQDIIAILGMDELSEDD-KQIVARARKIQRFLSQP 402


>gi|157285165|gb|ABV31322.1| ATPase [Vibrio mediterranei]
          Length = 435

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 95/415 (22%), Positives = 175/415 (42%), Gaps = 27/415 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L+  V  G+ +   G         + +  D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAD-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPYADLKEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPELLGRVVNTLGEPIDGKGPI-EAKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +     IGK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELIIGDRQIGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + ++VVVA++ ES  L+ +AP +   + EYF  +G++ L++ D +++ A + R+I+  
Sbjct: 176 ALQNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTNGEVKGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L       G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTEAFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
           +  + E   +     +   +D    + +     + + +KQ     +   VF +  
Sbjct: 356 LAAYRE---LAAFAQFSSDLDEATKRQLSHGQKVTELMKQKQ--YAPMSVFDQAL 405


>gi|15607015|ref|NP_214397.1| F0F1 ATP synthase subunit beta [Aquifex aeolicus VF5]
 gi|3913128|sp|O67828|ATPB_AQUAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2984264|gb|AAC07790.1| ATP synthase F1 beta subunit [Aquifex aeolicus VF5]
          Length = 478

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 194/420 (46%), Gaps = 25/420 (5%)

Query: 21  VQGGYISSITSVYYTVT--CLSQYVCLGDFVVHQGKNSDNLG----QVI------RINLD 68
           V  G +  +      V    + +   + D +    +  D+ G    +V+       I   
Sbjct: 4   VIKGKVVQVIGPVVDVEFEGVKELPKIKDGLKTIRRAIDDRGNWFEEVLFMEVAQHIGEH 63

Query: 69  IVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +G  + +  G  V +  G  +I       GR+ N  G+PID    +   +    
Sbjct: 64  RVRAIAMGPTDGLVRGQEVEYLGGPIKIPVGKEVLGRIFNVAGQPIDEQGPVEAKEY-WP 122

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +    P  + +    +  +TGI+VID+  P+  G ++G+F G+G+GK+ L+     +   
Sbjct: 123 MFRNPPELVEQSTKVEILETGIKVIDLLQPIIKGGKVGLFGGAGVGKTVLMQELIHNIAR 182

Query: 188 DK---VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAE 243
                 ++  VGER RE  +   +     +   +V+V    +E P +R     T +T+AE
Sbjct: 183 FHEGYSVVVGVGERTREGNDLWLEMKESGVLPYTVMVYGQMNEPPGVRFRVAHTGLTMAE 242

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VL+ +D+I RF  +  E++T  G LP A GY  ++ +++  + ERI  +  
Sbjct: 243 YFRDVEGQDVLIFIDNIFRFVQAGAEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TST 300

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA- 361
           +KG+ITA+ +V V  D+  DP   S+ + LD   VL R LAE G YP +DPL S S+   
Sbjct: 301 KKGSITAIQAVYVPADDITDPAPWSIFAHLDATTVLTRRLAELGIYPAIDPLESTSKYLA 360

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQS 420
            +    +  ++   +  ++ R++E ++I  I G     D   DKA+ ++   I  FL Q 
Sbjct: 361 PEYVGEEHYEVAMEVKRILQRYKELQEIIAILGMEELSDE--DKAIVNRARRIQKFLSQP 418


>gi|11559344|dbj|BAB18830.1| ATP synthase beta-subunit [Pandorina morum]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMDVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMG-IVKVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|153839883|ref|ZP_01992550.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ3810]
 gi|149746591|gb|EDM57579.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ3810]
          Length = 448

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 170/369 (46%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   +V    +G  + +  G  V + G    +       GR++N LG  ID    +G  +
Sbjct: 28  LGGGVVRCIVMGSSDGLRRGVEVVNTGAPISVPVGTKTLGRIMNVLGDAIDERGEIGAEE 87

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +   I  + P    +       +TG++VID+  P   G +IG+F G+G+GK+  +     
Sbjct: 88  V-YSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELIN 146

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +F  +               K  +V    +E P  R 
Sbjct: 147 NIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVENPEESKVAMVYGQMNEPPGNRL 206

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G +VLL +D+I R+  +  E++   G +P A GY  ++  E+  
Sbjct: 207 RVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGV 266

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD  +VLNR++A  G YP +D
Sbjct: 267 LQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAID 324

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR  D      D   +   +   + R++E +DI  I G     +    + V +  
Sbjct: 325 PLDSTSRQLDPLVVGQDHYDIARGVQQTLQRYKELKDIIAILGMDELSESD-KQVVSRAR 383

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 384 KIERFLTQP 392


>gi|21956140|dbj|BAC06431.1| ATP synthase beta-subunit [Gonium multicoccum]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVVVSE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVESQLGDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDCAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|325125459|gb|ADY84789.1| ATP synthase beta subunit [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 479

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 178/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIV-YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V +  +   + +VI    D V     +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDDSIILEVILEQGDGVLRCIAMESTDGLRRGMKVEDTGSSISVPVGPDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG            I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +   + + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KLIVARARRIQFFLSQN 408


>gi|42558372|gb|AAS19895.1| ATP synthase beta chain [Melpomene moniliformis]
 gi|42558374|gb|AAS19896.1| ATP synthase beta chain [Melpomene moniliformis]
 gi|42558378|gb|AAS19898.1| ATP synthase beta chain [Melpomene pseudonutans]
          Length = 422

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSVIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|4519334|dbj|BAA75582.1| ATP synthase beta-subunit [Volvulina compacta]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVL-VEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|302747394|gb|ADL63178.1| Atp1 [Hirtella triandra]
          Length = 349

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G    +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLELAQ 349


>gi|11559352|dbj|BAB18834.1| ATP synthase beta-subunit [Astrephomene gubernaculifera]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMDVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVIYEE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +   +   ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYECAQNVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|323715430|gb|ADY04783.1| ATP synthase beta subunit [Mastixia pentandra]
          Length = 472

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 4   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQPINVTCEVQQLLGNNRVRAVA 61

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +        R+ N L +P+D    +     +  I    P
Sbjct: 62  MSATDGLTRGMEVIDTGAPLSVPVGGATLRRIFNVLWEPVDNLGPVD-TRTTSPIHRSAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 121 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 180

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 181 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 240

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 241 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TS 298

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 299 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 358

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 417


>gi|302747524|gb|ADL63243.1| Atp1 [Lonicera sp. Qiu 05010]
          Length = 349

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +       +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGYVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKIMKQVCGSSKLELAQ 349


>gi|150035721|gb|ABR67206.1| ATP synthase beta subunit [Danthonia californica]
          Length = 412

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 18/352 (5%)

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+PID    +     +  I    P  +     
Sbjct: 2   RGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS-ATFPIHRSAPAFIELDTK 60

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   ER
Sbjct: 61  LAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGER 120

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 121 TREGNDLYMEMKESGVINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNK 180

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     +KG+IT+
Sbjct: 181 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIA--STKKGSITS 238

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +        +
Sbjct: 239 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNE 298

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 299 HYDTAQRVKETLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 349


>gi|42559058|gb|AAS20215.1| ATP synthase beta subunit [Smilax rotundifolia]
          Length = 459

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 106/389 (27%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  D  GQ I +  ++        V    +   + +  G  V   G    +       GR
Sbjct: 29  KGRDTAGQQINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDMGAPLSVPVGGATLGR 88

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +     +  I    P  +        F+TGI+V+D+  P   G +I
Sbjct: 89  IFNVLGEPVDDLGPVD-TRTTSPIHRSSPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 147

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L+     +       +S+ G   ER RE  +   +             
Sbjct: 148 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIA 207

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 208 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL 267

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 268 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHL 325

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +     R++E +DI  
Sbjct: 326 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIA 385

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 386 ILGLDELSEDD-RLTVARARKIERFLSQP 413


>gi|42558376|gb|AAS19897.1| ATP synthase beta chain [Melpomene flabelliformis]
          Length = 422

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSSVIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|302747504|gb|ADL63233.1| Atp1 [Hypericum sp. Qiu 95082]
          Length = 349

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      +   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFASGVN---GIAMNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     +
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAS 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|122051545|gb|ABM65875.1| ATP synthase beta chain [Lellingeria saffordii]
          Length = 410

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 5   KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 64

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 65  IFNVLGEPVDNLGPVRNSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 123

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  +     +       +S+ G   ER RE  +   +             
Sbjct: 124 GLFGGAGVGKTVPIMESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 183

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 184 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 243

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 244 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 301

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 302 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 361

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 362 ILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|23503591|dbj|BAC20392.1| ATP synthase beta-subunit [Pediastrum duplex]
          Length = 376

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 98/362 (27%), Positives = 163/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VAMNPTDGLMRGMEVLDTGKPLNVPVGKETLGRIFNVLGEPVDNMGPV-KNEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  PPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V PL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRDLAAKGIYPAVSPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   +   L 
Sbjct: 298 MLQPWILGEKHYDCAQSVKRTLQRYKELQDIIAILGLDELSEDD-RLIVARARKVERLLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|302747656|gb|ADL63309.1| Atp1 [Stellaria sp. Qiu 95015]
          Length = 349

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           +++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  MVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSKATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|149384865|gb|ABR25241.1| ATP synthase beta chain [Gymnocarpium dryopteris]
          Length = 426

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|116787106|gb|ABK24378.1| unknown [Picea sitchensis]
          Length = 568

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 107/415 (25%), Positives = 183/415 (44%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G++S +      V   T L   +   + + +  +    + Q +    + V    +   E 
Sbjct: 96  GHVSQVIGAVVDVRFPTGLPPILTALEVLDNPIRLVLEVAQHLG--ENTVRTIAMDETEG 153

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    I       GR++N +G+ ID    L   D  + I  + P  + + 
Sbjct: 154 LVRGQKVLNTGSPITIPVGRATLGRIMNVIGEAIDHKGDL-TTDHYLPIHREAPSFVEQS 212

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 213 TEQEILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 272

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 273 ERTREGNDLYREMIESGVIKLGEKQGESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 332

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 333 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 390

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 391 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHIL 450

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 451 GEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVSRARKIQRFLSQP 504


>gi|9799478|gb|AAF98989.1| ATP synthase beta subunit [Choristylis rhamnoides]
          Length = 490

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 178/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIXGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
               + ++ G  V   G    +       GR+ N LG+P+D    +     S  I    P
Sbjct: 71  XSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTSTTS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG F   G G S L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGFFGEXGXGXSXLIMELIDNIAKAHXGVS 189

Query: 194 L---VGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           +   VGER R   +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFXEVGERTRXGNDLYMEMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARARKIERFLSQP 426


>gi|42558414|gb|AAS19916.1| ATP synthase beta chain [Terpsichore longisetosa]
          Length = 422

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRTSTIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  +     +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPIMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|302747582|gb|ADL63272.1| Atp1 [Pereskia grandifolia]
          Length = 349

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTGIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAVGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|20146618|gb|AAM12463.1| ATP synthase alpha subunit [Symplocos bogotensis]
          Length = 358

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 19/362 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123
           +  D V I   G    I  GDLV   G     P      GRV++ALG PIDG  SL   +
Sbjct: 1   LENDNVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVHALGVPIDGRGSLSDHE 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               +  K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      
Sbjct: 61  -RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTIL 119

Query: 184 SDCFD-----------KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILR 231
           +                 +   +G++   V + ++     N  + S++V AT+ +   L+
Sbjct: 120 NQKQINSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQ 179

Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
            +AP +   + EYF   G + L+I D +++ A + R+++      P    +P  VF    
Sbjct: 180 FLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHS 239

Query: 292 RLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349
           RLLER      +   G++TA+  +     + +  I  +V  I DG I     L   G  P
Sbjct: 240 RLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRP 299

Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
            ++   SVSR+   A     K++  S    + ++ E   +  +  +   +D      ++ 
Sbjct: 300 AINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAALAQFGSDLDAATQALLNT 356

Query: 410 VP 411
             
Sbjct: 357 GA 358


>gi|5001571|gb|AAD37032.1|AF092106_1 ATP synthase beta subunit [Aristolochia tomentosa]
          Length = 485

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 110/421 (26%), Positives = 177/421 (42%), Gaps = 31/421 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLD--------IVYIC 73
           G I+ I      V      +       VV   K  D +G  + +  +         V   
Sbjct: 8   GRIAQIIGPVLDVAFPPGKMPNXYNALVV---KGRDTVGHQLNVXCEXQQLLGXNRVRAV 64

Query: 74  PVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    
Sbjct: 65  AMSATDGLMRGXEVIDTGAPLSVPVGGPTLGRIXNVLGEPVDNLGPVD-TRTTFPIHRSA 123

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +
Sbjct: 124 PAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGV 183

Query: 193 SLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTI 241
           S+ G   ER RE  +   +               K  +V    +E P  R    LTA+T+
Sbjct: 184 SVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTM 243

Query: 242 AEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300
           AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +
Sbjct: 244 AEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--T 301

Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
             ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +
Sbjct: 302 STKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 361

Query: 361 ADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419
                   +  +    +     R++E +DI  I G     +      V +   I  FL Q
Sbjct: 362 LQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQ 420

Query: 420 S 420
            
Sbjct: 421 P 421


>gi|1168582|sp|P42469|ATPB_STIAU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|587526|emb|CAA54206.1| ATPase beta-subunit [Stigmatella aurantiaca]
          Length = 481

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 112/424 (26%), Positives = 194/424 (45%), Gaps = 29/424 (6%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN--------LDIVY 71
           V   G I+ +      V      +    +   +  N+    +   +          ++V 
Sbjct: 5   VATVGKITQVLGPVIDVEFPPGGLPEV-YTALKVTNTSISAEADNLTIEVAQHLGENMVR 63

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   E ++ G  V + G   ++       GR++N +G+P+D    +     +  I  
Sbjct: 64  CISMDSTEGLARGQAVKNTGAPIQVPVGQGTLGRILNVIGEPVDERGPI-TSSQTWPIHR 122

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P  +++    + F+TGI+VID+  P   G +IG+F G+G+GK+ LL     +   ++ 
Sbjct: 123 PAPTFVDQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELIVNVAKERG 182

Query: 191 ---IISLVGERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAV 239
              + + VGER RE  +   +               + V+V    +E P  R    L+A+
Sbjct: 183 GFSVFAGVGERTREGNDLYHEMQEGNVSTPRTWMESQCVLVYGQMNEPPGARARVALSAL 242

Query: 240 TIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           TIAEYF   +G +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 243 TIAEYFRDMEGHDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGALQERI- 301

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG++T+V ++ V  D+  DP   +  + LD   VLNR+++E G YP VDPL S S
Sbjct: 302 -TSTTKGSVTSVQAIYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTS 360

Query: 359 RLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDF 416
           R+ D      +   +   +  ++ +++E +DI  I G         DK  V +   I  F
Sbjct: 361 RILDPNVVGPEHYAVARKVQGILQKYKELQDIIAILGMDELS--ETDKLTVARARKIQKF 418

Query: 417 LKQS 420
           L Q 
Sbjct: 419 LSQP 422


>gi|29726134|gb|AAD10326.2| ATP synthase beta subunit [Dicranostigma franchetianum]
          Length = 492

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 15  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 72

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GR+ N LG+P+D    +        I    P
Sbjct: 73  MSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTX-XXXPIHRSAP 131

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 132 AFIQLDTKLSIFETGIXVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAXGXVS 191

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 192 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 251

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RFA +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 252 EYFRDVNEQDVLLFIDNIFRFAQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 309

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 310 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 369

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I   L Q 
Sbjct: 370 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERXLSQP 428


>gi|302747512|gb|ADL63237.1| Atp1 [Ixonanthes icosandra]
          Length = 348

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 176

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKPMKQVCGSSKLELAQ 348


>gi|75338126|sp|Q9TJR9|ATPB_PROWI RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta
 gi|5748664|emb|CAB53102.1| ATP synthase CF1 beta chain [Prototheca wickerhamii]
          Length = 481

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 114/419 (27%), Positives = 183/419 (43%), Gaps = 25/419 (5%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNL-----GQVIRINLDI-VYICPV 75
            G I+ I      +T     +  +   +    KNS+ L      +V ++  D  V    +
Sbjct: 10  FGTITRIIGPVLDITFTGNKMPKIYHALSIIDKNSEGLDIFIVCEVQQLLGDHCVRAISM 69

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  VF  G   ++       GR+ N LG+ ID        +  + I    P 
Sbjct: 70  NATDGLKRGMTVFDTGDVLKVPVGRSTLGRIFNVLGETIDNLGPADTSNQ-LPIHRSAPK 128

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+
Sbjct: 129 FIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKTHGGVSV 188

Query: 195 VG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            G   ER RE  +   +               K  +V    +E P  R    LTA+T+AE
Sbjct: 189 FGGVGERTREGNDLYMEMKESGIINEALISESKVALVYGQMNEPPGARMRVGLTALTMAE 248

Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VLL +D+I RF  +  E++   G LP A GY  ++ SE+  L ERI  +  
Sbjct: 249 YFRDVSSQDVLLFIDNIFRFLQAGSEVSALLGRLPSAVGYQPTLASEMGALQERI--TST 306

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           + G+IT++ +V +  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +  
Sbjct: 307 KDGSITSIQAVYIPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLESTSTMLQ 366

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  K   ++   + R++E +DI  I G            V +   I  FL Q 
Sbjct: 367 PWIVGEEHYKCSQNVKQTLQRYKELQDIIAILGLDELS-PDDRLIVARARKIERFLSQP 424


>gi|154687796|ref|YP_001422957.1| F0F1 ATP synthase subunit beta [Bacillus amyloliquefaciens FZB42]
 gi|166201690|sp|A7Z9Q0|ATPB_BACA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|154353647|gb|ABS75726.1| AtpD [Bacillus amyloliquefaciens FZB42]
          Length = 473

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 167/366 (45%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + I  G      G    +       GRV N LG  ID ++ L 
Sbjct: 51  ALHLGDDTVRTIAMASTDGIQRGMEAVDTGAPISVPVGDVTLGRVFNVLGDKIDLNEPLP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADAQKDPIHRSAPSFDELSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      +KK+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVIKKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  K   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEHFRDKQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   +   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELGEED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|326426456|gb|EGD72026.1| ATP synthase subunit beta [Salpingoeca sp. ATCC 50818]
          Length = 516

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 109/419 (26%), Positives = 180/419 (42%), Gaps = 26/419 (6%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I S+      V      +  + + +  +G  +  + +V   +  + V    +   E +
Sbjct: 32  GSIVSVIGAVVDVKFEDGSLPPILNALEVKGHETRLVLEVAQHLGENTVRTIAMDGTEGL 91

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V   G    I       GR++N +G+PID    + K + ++ I ++ PP    + 
Sbjct: 92  VRGQPVVDTGDAITIPVGIPTLGRIMNVIGEPIDERGPI-KAESTLPIHAEAPPLTEMEV 150

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
                +TGI+VID+  P   G +IG+F G+G+GK+ L+     +         + + VGE
Sbjct: 151 KPAILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHSGYSVFAGVGE 210

Query: 198 RGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           R RE  +   +               K  +V    +E P  R    LT +T+AE      
Sbjct: 211 RTREGNDLYHEMQEGGVIDLETPENSKVALVYGQMNEPPGARARVALTGLTVAESLRDLP 270

Query: 250 DNVL-------LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           D            +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  
Sbjct: 271 DPSTGRGRDVLFFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TST 328

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
             G+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 329 TFGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSASRVLD 388

Query: 363 KAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            A   DE       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 389 AAIVGDEHYACARDVQKILQDYKSLQDIIAILGMDELSEED-KLTVARARKIQRFLSQP 446


>gi|259907609|ref|YP_002647965.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|224963231|emb|CAX54715.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96]
 gi|283477451|emb|CAY73367.1| flagellum-specific ATP synthase [Erwinia pyrifoliae DSM 12163]
          Length = 454

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 148/414 (35%), Positives = 234/414 (56%), Gaps = 15/414 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
            + G ++  T +      L   + +G   V +    D +     +V+     ++Y+ P+ 
Sbjct: 26  RRYGRLTRATGLVMEAVGL--KLPIGAICVVERHTRDGIMPVESEVVGFKDQLLYLMPLE 83

Query: 77  IGEEISLGDLVFH------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
             + +  G  V+        G+ ++       GRV++A G+P+DG  +  K   +  + +
Sbjct: 84  HVDGVLPGARVYAPDGDNDEGK-QLPVGPQLLGRVLDAQGRPLDGRPAPLKTRCA-SLFT 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           +    ++R  ++     G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +
Sbjct: 142 QPINPLHRDPIKSVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARFTDADVI 201

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ L+GERGREV++FIE+ LG + ++++VV+ A +D SP+LR    + A  +AE F  +G
Sbjct: 202 VVGLIGERGREVKDFIENILGAEGIERAVVIAAPADVSPVLRMQGAVYATRLAEDFRDRG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            NVLLI+DS+TRFA + RE+A   GE P  +GYP SVF+ LP L+ER G      G+ITA
Sbjct: 262 MNVLLIMDSLTRFAMAQREVALAIGEPPATKGYPPSVFARLPALVERAGNGVAGGGSITA 321

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR   +     +
Sbjct: 322 FYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIPHAQ 381

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
            + V S    +  ++   D+  +G Y  G D +LD+A+ + P +  FL QS  +
Sbjct: 382 YRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDALLDRAIARYPQMESFLHQSIHE 435


>gi|21684921|emb|CAD11587.1| ATP synthase beta subunit [Xyris capensis]
          Length = 441

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 105/385 (27%), Positives = 171/385 (44%), Gaps = 19/385 (4%)

Query: 51  HQGKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108
             G+      +V ++  +  V    +   + +  G  V   G    +       GR+ N 
Sbjct: 3   IDGQPIXVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAXLSVPVGXXTLGRIFNV 62

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           LG+PID    +     S  I    P  +  +     F+TGI+V+D+  P   G +IG+F 
Sbjct: 63  LGEPIDNLGPVDTSTTS-PIHRSAPTFVQLETRLXIFETGIKVVDLLAPYRRGGKIGLFG 121

Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKS 217
           G+G+GK+ L+     +       +S+ G   ER RE  +   +               K 
Sbjct: 122 GAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKNLAESKV 181

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 182 ALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRM 241

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   
Sbjct: 242 PSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATT 299

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R LA +G YP VDPL S S +        +  +    +   + R++E +D+  I G 
Sbjct: 300 VLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQRYKELQDMIAILGL 359

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420
               +      V +   I  FL Q 
Sbjct: 360 DELGEED-RLTVARARKIERFLSQP 383


>gi|170516134|gb|ACB15077.1| ATPase alpha subunit [Picea smithiana]
          Length = 343

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 85/347 (24%), Positives = 148/347 (42%), Gaps = 19/347 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           I   G    I  G LV   G    +       GRV++ALG PIDG  +L +  L   + +
Sbjct: 1   IVVFGSDTAIKEGSLVKRTGSIVSVPVGKAMLGRVVDALGVPIDGKGALSEHLLRR-VEA 59

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---- 186
           K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +      
Sbjct: 60  KAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRMNS 119

Query: 187 -------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
                      +   +G++   V + ++     D L+ S+ V AT+ +   L+ +AP + 
Sbjct: 120 KSKADSDKLYCVYVAIGQKRSTVAQLVQIISEADALEYSIAVAATASDPAPLQFLAPYSG 179

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER  
Sbjct: 180 CAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAA 239

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   S
Sbjct: 240 KRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLS 299

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           VSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 300 VSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 343


>gi|114644228|ref|XP_001168671.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F1 complex,
           beta subunit isoform 1 [Pan troglodytes]
          Length = 518

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 102/413 (24%), Positives = 178/413 (43%), Gaps = 27/413 (6%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
              G I ++      V        + + +  QG+ +  + +V   +    V    +   E
Sbjct: 58  AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V   G   +I       GR++N +G+PID    + K      I ++ P  M  
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFMEM 176

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
              ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 177 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 236

Query: 196 GERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           GER RE  +   + +        D   K  +V    +E P  R    LT +T+AEYF  +
Sbjct: 237 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 296

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
               +L+   ++             G +P A GY  ++ +++  + ERI  +  +KG+IT
Sbjct: 297 EGQDVLLFIDVSA----------LLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSIT 344

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V ++ V  D+  DP   +  + LD   VL+R++AE G YP VDPL S SR+ D      
Sbjct: 345 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGS 404

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 405 EHYDVARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 456


>gi|302747324|gb|ADL63143.1| Atp1 [Ailanthus altissima]
          Length = 349

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 19/351 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G    +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           I DG I L   L   G  P ++   SVSR+   A     K++  SL    H
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLEWH 348


>gi|240047757|ref|YP_002961145.1| F0F1 ATP synthase subunit alpha [Mycoplasma conjunctivae HRC/581]
 gi|239985329|emb|CAT05342.1| ATP synthase subunit alpha [Mycoplasma conjunctivae]
          Length = 505

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 98/422 (23%), Positives = 179/422 (42%), Gaps = 15/422 (3%)

Query: 6   ETLAQLAEDYSKNLVVQ-GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64
             +    +++   +V    G +  +      V  + + V  G+ V     +++  G  + 
Sbjct: 8   AIIRDQIKNFENKIVSDDVGKVIVVGDGVALVFGIEK-VKFGELVAF---DNNVYGIALN 63

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  D+V +  +G    +  G +V    +           GRV+NALG+PIDG   + +  
Sbjct: 64  LEQDLVGVVIMGDENSVFQGSIVRRTNQVISTLVGDQLLGRVVNALGQPIDGKGEI-ETT 122

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
              +I ++ P  M RQ V +G  TGI  ID   P+  GQR  +      GK+T+      
Sbjct: 123 KRRDIFAEAPSIMERQSVSRGLNTGILAIDSIVPIGLGQRELIIGDRQTGKTTIAIDTIL 182

Query: 184 SDCF--DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVT 240
           +        +   +G++   V +           + + V+ A + E   L+ +AP T   
Sbjct: 183 NQKGKNVYCVYVAIGQKNSNVAQLAALLEKHGALEYTTVITAGASELAPLQYIAPYTGTA 242

Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG-- 298
           IAE +   G +VL+I D +++ A + R ++      P    YP  +F +   LLER    
Sbjct: 243 IAEEWMHNGKDVLIIYDDLSKHAVAYRTLSLLLRRPPGREAYPGDIFYQHSYLLERSSQL 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
             +   G+ITA+  V     + +  I  ++ SI DG I +  +L   G+ P +D   SVS
Sbjct: 303 ADKHGGGSITALPIVETQAGDISAYIPTNIISITDGQIFVRDNLFNSGQKPAIDIGFSVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           R+   A +   K + S+L   + ++ E +       +   +     + + +   IY+ LK
Sbjct: 363 RVGSAAQTKAMKAVASNLKLQLAQYSELK---AFTQFGSDLGQSSQQILDKGNKIYELLK 419

Query: 419 QS 420
           Q 
Sbjct: 420 QD 421


>gi|74317109|ref|YP_314849.1| flagella ATPase FliI [Thiobacillus denitrificans ATCC 25259]
 gi|74056604|gb|AAZ97044.1| flagella ATPase FliI [Thiobacillus denitrificans ATCC 25259]
          Length = 464

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 146/433 (33%), Positives = 227/433 (52%), Gaps = 25/433 (5%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           +   G ++ ++ +      L   V     +   G       +V     D ++I P     
Sbjct: 24  IAASGRLTRVSGLVMEAVGLRMPVGSQCHIQIPG-GQSIEAEVAGFAGDRLFIMPATDIY 82

Query: 80  EISLGDLVFHWGRF----------------------RISPSACWCGRVINALGKPIDGDD 117
            +  G  V                            ++       GRV++  G+P+DG  
Sbjct: 83  GVMPGARVVPDNPLAAQPPRLGMRYIPRRRAQDRVRQVPVGDSLLGRVLDGAGRPLDGIG 142

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            L   +  + + S+    + R  + +    G+R I+    +  GQR+G+FAGSG+GKS L
Sbjct: 143 PLSL-ERRVPLYSRPINPLERAPIRETLDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVL 201

Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236
           L M AR    D V++ L+GERGREV+EFI+  LG + + ++VVV A +D  P++R     
Sbjct: 202 LGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGMARAVVVAAPADHPPLMRLNGAA 261

Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            A++IAEYF  +G +VLLI+DS+TR+A + RE+A   GE P  +GYP SVF++LP+L ER
Sbjct: 262 YAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIGEPPATKGYPPSVFAKLPQLAER 321

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
            G      G+ITA  +VL++GD+  DPIAD+ R+ILDGHIVL+R LA+ G YP +D  AS
Sbjct: 322 AGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDGHIVLSRDLADAGHYPAIDIEAS 381

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           +SR      + +  +      +L  R+  +RD+  +G Y PG D++LD+ V   P +  +
Sbjct: 382 ISRAQPDLLTEEALERTRRFKYLYSRYMRSRDLLAVGAYVPGADVVLDEGVRLYPRMQGY 441

Query: 417 LKQSPSDLSSEDV 429
           L Q   + +S D 
Sbjct: 442 LMQGMREQASLDA 454


>gi|78186932|ref|YP_374975.1| F0F1 ATP synthase subunit alpha [Chlorobium luteolum DSM 273]
 gi|115312226|sp|Q3B3Z9|ATPA1_PELLD RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP
           synthase F1 sector subunit alpha 1; AltName:
           Full=F-ATPase subunit alpha 1
 gi|78166834|gb|ABB23932.1| ATP synthase F1, alpha subunit [Chlorobium luteolum DSM 273]
          Length = 511

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 105/431 (24%), Positives = 182/431 (42%), Gaps = 15/431 (3%)

Query: 1   MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59
           +   L ++ + +      + + + G ++++ +    +  L   V   + V   G      
Sbjct: 10  IDAALSSIGEASRTTQPEIELRENGVVTTVLNGIALIRGL-PGVGYEELVEMSGG---VY 65

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118
           G    ++ D V +  +G   ++  G      GR   +       GRV+N LG+P+D +  
Sbjct: 66  GIAFNVDPDEVGVVLLGEYAKLQAGGRARRTGRVMDVPVGDGLLGRVVNPLGRPLDAEGE 125

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
             +    + I    P  M+R  V    +TG++V+D   P+  GQR  +      GK+ + 
Sbjct: 126 -PRFSGRLPIERPSPGIMDRNAVSTPLQTGLKVVDAIVPIGRGQRELILGDRQTGKTAIA 184

Query: 179 SMFARSDCF--DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
                +        I   +G+R   V + +           +V VV   ++   L+ +AP
Sbjct: 185 VATILNQKGRNVICIYCAIGQRASAVAKVLAQLREHGAMAHTVAVVTEGNDPSGLQYIAP 244

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
             A +I EYF  +G +VL++ D +T  A + RE++      P    +P  +F    RLLE
Sbjct: 245 YAATSIGEYFMEQGRDVLIVYDDLTNHARAYRELSLLLKRPPGREAFPGDIFYVHSRLLE 304

Query: 296 R--IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      E   G++TA+  +  +  N +  I  ++ SI DG I L+ +L E G  P VD 
Sbjct: 305 RSTHLRKELGGGSLTALPIIETEAQNISAYIPTNLISITDGQIYLSPTLFELGNLPAVDI 364

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+  KA  A  + +   L     +FEE  +    G     +D    KA+     I
Sbjct: 365 GKSVSRVGGKAQLAAYRSVTGRLKLAYAQFEELENFARFG---TRLDEASRKAITHGERI 421

Query: 414 YDFLKQSPSDL 424
            + LKQ   D+
Sbjct: 422 RECLKQDELDV 432


>gi|323466857|gb|ADX70544.1| Proton-translocating ATPase beta subunit [Lactobacillus helveticus
           H10]
          Length = 479

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 182/379 (48%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V + K+   + +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSKDDSIVLEVTLELGDGVLRTIAMESTDGLRRGMKVEDTGGPISVPVGEDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG     K      I    P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPDFPKDHPREGIHKDAPKYADLTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESSSSALDPEVVGREHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KLIVARARKIQFFLSQN 408


>gi|224370583|ref|YP_002604747.1| F0F1 ATP synthase subunit beta [Desulfobacterium autotrophicum
           HRM2]
 gi|223693300|gb|ACN16583.1| AtpD2 [Desulfobacterium autotrophicum HRM2]
          Length = 472

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 106/363 (29%), Positives = 175/363 (48%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    + + + +  G LV   G    +   A   GRV+N +GKP+DG   + + +
Sbjct: 54  LGDNVVRCIGMDVTDGLQRGMLVKDTGAPIMMPVGAASLGRVLNVVGKPVDGLGPISQEN 113

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           + M I    P   ++    +  +TG++V+D+  P   G ++G+F G+G+GK+ ++     
Sbjct: 114 M-MPIHRLAPSFTSQDTTVRVLETGVKVVDLLVPFPRGGKMGMFGGAGVGKTVIMMEMVN 172

Query: 184 SDCFDKVIISLVGERGREVRE---FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +       IS+ G  G   RE      +     +  K  +V     E P  R    L+A+
Sbjct: 173 NIAMQHGGISVFGGVGERTREGNDLYHEMKDSGVLPKCSLVYGQMTEPPGARARVALSAL 232

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  ++  L ERI 
Sbjct: 233 TCAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSATLGRMPSAVGYQPTLAVDMGALQERI- 291

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+ITAV  V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S S
Sbjct: 292 -TSTDKGSITAVQCVYVPADDLTDPAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTS 350

Query: 359 RLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D A    +   +   +   + +++E +DI  I G     D      V +   +  FL
Sbjct: 351 RILDAAYVGEEHYNVARVVQQTLQKYKELQDIIAILGMDELSDED-KLTVQRARKLQRFL 409

Query: 418 KQS 420
            Q 
Sbjct: 410 SQP 412


>gi|302747542|gb|ADL63252.1| Atp1 [Morina longifolia]
          Length = 349

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGD 212
            +      GK+ +      +                 +   +G++   V + ++    G+
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEGN 177

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKIMKQVCGSSKLELAQ 349


>gi|149384671|gb|ABR25144.1| ATP synthase beta chain [Nephrolepis hirsutula]
 gi|149798703|gb|ABR32042.1| ATP synthase beta chain [Nephrolepis cordifolia]
          Length = 426

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|15837745|ref|NP_298433.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa 9a5c]
 gi|81623765|sp|Q9PE85|ATPB_XYLFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|9106107|gb|AAF83953.1|AE003950_3 ATP synthase, beta chain [Xylella fastidiosa 9a5c]
          Length = 466

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 177/413 (42%), Gaps = 24/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIGE 79
           G I  I      V      V      V+     D    ++     +   IV    +G  +
Sbjct: 4   GKIVQIIGAIVDVEFPRNNVP----KVYNALKIDGTAIILEVQQQLGDGIVRTIALGSTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +    +    G    +       GR+++ LG PID    +   D   EI    P   ++
Sbjct: 60  GLKRNLIATDTGHAITVPVGTGTLGRIMDVLGNPIDEAGPITYTDQ-WEIHRNAPSYEDQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 ASTTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +    G+IT
Sbjct: 239 GKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +    LD  + L+RS+A  G YP VDPL S SR  D     +
Sbjct: 297 SIQAVYVPADDLTDPSPATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGE 356

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E       +   + ++++ +DI  I G     +     AV +   I  F  Q 
Sbjct: 357 EHYNTTQRVQQTLQKYKDLKDIIAILGMDELSEDD-KLAVSRARKIERFFSQP 408


>gi|302747484|gb|ADL63223.1| Atp1 [Helwingia japonica]
          Length = 349

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 151/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGSLSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLL--------SMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +          M +R+         +   VG++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILDQKQMNSRATSESETLYCVYVAVGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKEVCGSSKLELAQ 349


>gi|293363728|ref|ZP_06610471.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2]
 gi|292552693|gb|EFF41460.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2]
          Length = 407

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 11/353 (3%)

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +S G  V   GR   +       GR+ + LG PID   +      +  I +  P
Sbjct: 1   MVSTNGLSRGLEVLDTGRAISVPVGNEVLGRMFDVLGNPIDLIPNQNWTKTN-PIHAMPP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               ++   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +     
Sbjct: 60  TYEEQKSTSEILETGIKVIDLLIPYSKGGKIGLFGGAGVGKTVLVQELINNIATEHNGLS 119

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248
           + + VGER RE  +   +     +  K+ +V    +E P  R    LT +T+AEYF   +
Sbjct: 120 VFAGVGERTREGNDLYHEMKAAGVLDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDEQ 179

Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   +G+IT
Sbjct: 180 NQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTRRGSIT 237

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367
           +V +V V  D+  DP   +  + LD   VL+R++A  G YP +DPL+S SRL D      
Sbjct: 238 SVQAVYVPADDLTDPAPATTFTHLDAKTVLDRNIAALGIYPAIDPLSSSSRLLDPLVVGN 297

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   + +++ RF+E +DI  I G     +    K V +   I +FL Q 
Sbjct: 298 EHYSVAQGVLNILQRFKELQDIIAILGMGELSEED-KKIVARARRIRNFLSQP 349


>gi|20467391|gb|AAL27826.1| ATPase beta subunit [Pseudotsuga menziesii]
          Length = 436

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GK      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 20  GKEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGTTLGRIFNVLG 79

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 80  EPVDNLGPVD-ARITSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 138

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 139 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQSISESKVAL 198

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 199 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 258

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP A +  +  D   V 
Sbjct: 259 AVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPAAATTFAHSDATTVP 316

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 317 SRGLAAKGIYPAVDPLDSTSTMLQPWMVGEEHYETAQGVKETLQRYKELQDIIAIPGLDE 376

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 377 LSEED-RLIVARARKIERFLSQP 398


>gi|170293963|gb|ACB13075.1| ATP synthase beta subunit [Bracteacoccus terrestris]
          Length = 366

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 161/352 (45%), Gaps = 18/352 (5%)

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G+   +       GR+ N LG+P+D    +   + ++ I    P  ++    
Sbjct: 1   RGMEVLDTGKPLSVPVGKDTLGRIFNVLGEPVDQMGPVQTKE-TLPIHRSSPAFVDLDTT 59

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 60  LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGER 119

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 120 TREGNDLYCEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNK 179

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT+
Sbjct: 180 QDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITS 237

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           + +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       + 
Sbjct: 238 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEK 297

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 ++   + R++E +DI  I G     +      V +   I   L Q 
Sbjct: 298 HYDCAQNVKKTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERLLSQP 348


>gi|179183938|gb|ACB78130.1| ATPase [Vibrio breoganii]
          Length = 400

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/402 (23%), Positives = 170/402 (42%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L++ V  G+ +   G         + +  D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAE-VMQGEMIELPGG---RYALALNLERDSVGAVVMGPFADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPELLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEESG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               ++VVVA++ ES  L+ +AP     + EYF  +G++ L+I D +++ A + R+I+  
Sbjct: 176 ALANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDVSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELXNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 LAQYRE---LAAFAQFSSDLDETTKKQLDHRAKVTELMKQKQ 394


>gi|110915658|gb|ABH02617.1| ATP synthase beta subunit [Hookerochloa hookeriana]
          Length = 471

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 165/379 (43%), Gaps = 19/379 (5%)

Query: 57  DNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114
           +   +V ++  +  V    +   + +  G      G    +       GR+   LG+P+D
Sbjct: 33  NVTCEVQQLLGNNRVRAVAMXATDGLMRGMEXIDTGAPLSVPVGGATLGRIFXVLGEPVD 92

Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174
               +     +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK
Sbjct: 93  NLGPVDSS-ATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGK 151

Query: 175 STLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVAT 223
           + L+     +       +S+ G   ER RE  +   +               K  +V   
Sbjct: 152 TVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIEESKVALVYGQ 211

Query: 224 SDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 212 MNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGY 271

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI     +KG IT++ +V V  D+  DP   +  + LD   VL+R L
Sbjct: 272 QPTLSTEMGSLQERIA--STKKGXITSIQAVXVPADDLTDPAPATTFAHLDATTVLSRGL 329

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           A +G YP VDPL S S +        +  +    +   + R++E +DI  I G     + 
Sbjct: 330 ASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYKELQDIIAILGLDELSEE 389

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 390 D-RLTVARARKIERFLSQP 407


>gi|20467385|gb|AAL27823.1| ATPase beta subunit [Ephedra major]
          Length = 447

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 31  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 90

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 91  EPVDNLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 149

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
            +GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 150 XVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIIESKVAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 210 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 270 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 328 SRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 387

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 388 LSEED-RLTVARARKIERFLSQP 409


>gi|32490757|ref|NP_871011.1| F0F1 ATP synthase subunit beta [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|81844477|sp|Q8D3J3|ATPB_WIGBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|25165963|dbj|BAC24154.1| atpD [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 462

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/406 (27%), Positives = 190/406 (46%), Gaps = 12/406 (2%)

Query: 23  GGYISSITSVYYTVTC-LSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
            G I  I      V   +S    +   +  + KN   + +V++ I   IV    +G  + 
Sbjct: 3   TGKIVQIIGPVIDVKFEISFIPKINFALEIKIKNKKLIMEVMQQIGDGIVRCILMGSSDG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  VF+  +   +       GR++N LG PID    +   +    I +K P      
Sbjct: 63  LKRGLKVFNLNKGIEVPVGKPTLGRIMNVLGDPIDRKGKILSSEYR-PIHNKSPSYNEIS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++  +TGI++ID+  P   G +IG+F G+G+GK+  +    R+   +     + S VG
Sbjct: 122 SSDELLETGIKIIDLICPFAKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGVG 181

Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           ER RE  +F  + +  N + K  +V    +E P  R    LT +T+AE F  +G++VL  
Sbjct: 182 ERTREGNDFYNEMISSNVIDKVSLVYGQMNEPPGNRLRVALTGLTLAEKFRDEGNDVLFF 241

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V ++ V
Sbjct: 242 VDNIYRYTLAGTEVSALLGRIPSAVGYQPTLSEEMGILQERI--TSTKSGSITSVQAIYV 299

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +    LD  +VL+R +A  G YP +DPL S SR  D      D   +  
Sbjct: 300 PADDLTDPSPATTFVHLDATVVLSRQIASLGIYPAIDPLDSTSRQLDPLIVGEDHYLVAR 359

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R+++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 KIQSILQRYKDLKDIIAILGIDELSEED-KILVSRARKIQRFLSQP 404


>gi|113910852|gb|ABI48158.1| ATPase beta subunit [Fissidens dubius]
          Length = 465

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 29/418 (6%)

Query: 26  ISSITSVYYTVT-CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICPVG 76
           I+ I      VT    +   + + ++ +G+N+   GQ I +  ++        V    + 
Sbjct: 1   ITQIIGPVLDVTFSPGKMPNIYNPLIVKGQNTA--GQEINVTCEVQQLLGNNKVRAVAMS 58

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 59  ATDGLMRGMQVSDTGAPLSVPVGEATPGRISNVLGEPVDNLGPVDAS-XTFPIHRSAPAF 117

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
                    F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 118 TQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTXLIMELINNIAKAHGGVSVF 177

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 178 GGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEY 237

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +V   +D+I RF  +  E++  SG +P A GY  ++ +E+  L ERI  +  +
Sbjct: 238 FRDVNKQDVPSFIDNIFRFVQAGSEVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTK 295

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDP  S S +   
Sbjct: 296 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPPDSTSTMLQP 355

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 356 WIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 412


>gi|283955551|ref|ZP_06373046.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283793012|gb|EFC31786.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 465

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N  G  ID  + +   D    I    P   +
Sbjct: 63  DGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEI-PFDKKWAIHRDPPAFED 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLVVERARKIEKFLSQP 407


>gi|78047551|ref|YP_363726.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|294664062|ref|ZP_06729464.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325926456|ref|ZP_08187777.1| ATPase FliI/YscN family [Xanthomonas perforans 91-118]
 gi|78035981|emb|CAJ23672.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|292606165|gb|EFF49414.1| flagellar biosynthesis/type III secretory pathway ATPase FliI
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|325543155|gb|EGD14597.1| ATPase FliI/YscN family [Xanthomonas perforans 91-118]
          Length = 458

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 144/427 (33%), Positives = 223/427 (52%), Gaps = 5/427 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           E  +   +++ G +     +    T       +G     +        +V+    +  Y+
Sbjct: 30  EPTAGRTLIREGILRRAVGLTLEATG--CEAPMGATCKVEVDGGWVDAEVVGFAGERTYL 87

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      +     V    R   +       GRVI++ G P+DG   + + + S+ +   
Sbjct: 88  MPSAELHGLLPNARVVPSRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RAEGSIGMAGV 146

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ +      G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D ++
Sbjct: 147 SINPLAREPITTSLDVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIV 206

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVR+F+      + L+++VVV A +D  P+ R      A  IAE+F  +G 
Sbjct: 207 VGLIGERGREVRDFVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGL 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA 
Sbjct: 267 NVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAF 326

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +
Sbjct: 327 YTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWR 386

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
             +  L  L+  +   RD+  IG Y+ G D   D+A+ + P I +FL Q     S     
Sbjct: 387 LRIRKLKRLLSAYTANRDLIAIGAYQRGSDPATDEALARWPEIVEFLGQDVHKASLLSDS 446

Query: 431 QEITKKL 437
               ++L
Sbjct: 447 LSALQQL 453


>gi|325280165|ref|YP_004252707.1| ATP synthase subunit alpha [Odoribacter splanchnicus DSM 20712]
 gi|324311974|gb|ADY32527.1| ATP synthase subunit alpha [Odoribacter splanchnicus DSM 20712]
          Length = 539

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/427 (23%), Positives = 161/427 (37%), Gaps = 36/427 (8%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G +  +      V  L   V  G+ +  +       G  + +  D V +  + +G+ +  
Sbjct: 28  GTVLEVGDGVANVFGL-DNVTSGELIEFENG---VRGVAMNLEEDQVGVVLLNLGDRVKE 83

Query: 84  GDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
                  G    I       GRVI+ LG+PIDG   +    L + +  K P  + RQ V+
Sbjct: 84  NFTAKRTGHIASIHVGEGLLGRVIDTLGEPIDGAGPITGDLLELPLERKAPGVIYRQPVK 143

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST-------LLSMFARSDCFDKVIISLV 195
           +  +TGI+ +D   P+  GQR  +      GK+              R       I   V
Sbjct: 144 EPLQTGIKAVDSMVPIGRGQRELIIGDRQTGKTAIAIDTILNQRENYRQGKPVYCIYVAV 203

Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254
           G++   V   +           +VV+ A + +S  +R  AP    TI EYF   G + L+
Sbjct: 204 GQKASSVAALVNVLKTHGAMDYTVVLAANASDSAAMRYYAPFAGATIGEYFRDSGRHALV 263

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--------------- 299
           + D +++ A + REI+           YP  +F    RLLER                  
Sbjct: 264 VYDDLSKQAVAYREISLILRRPSGREAYPGDIFYLHSRLLERAAKIISNDEVASTMNDLP 323

Query: 300 -----SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
                  K  G++TA+  +     + +  I  +V SI DG I L  SL  EG  P ++  
Sbjct: 324 EPLKPVIKGGGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETSLFNEGVRPAINVG 383

Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
            SVSR+   A     KK+  +L     ++ E       GG    +D +    + +     
Sbjct: 384 VSVSRVGGNAQVKAMKKIAGTLKIDQAQYRELESFSKFGG---DLDPVTQMVIDKGQKNA 440

Query: 415 DFLKQSP 421
             L Q  
Sbjct: 441 RLLVQPQ 447


>gi|302747548|gb|ADL63255.1| Atp1 [Morella cerifera]
          Length = 344

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 19/347 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           I DG I L   L   G  P ++   SVSR+   A     K++  SL 
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLK 344


>gi|312173318|emb|CBX81573.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC BAA-2158]
          Length = 454

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 236/428 (55%), Gaps = 15/428 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
            + G ++  T +      L   + +G   V + +  + +     +V+     ++Y+ P+ 
Sbjct: 26  RRYGRLTRATGLVMEAVGL--KLPIGAICVVERQTRNGIMPVECEVVGFKDQLLYLMPLE 83

Query: 77  IGEEISLGDLVFH------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
             + +  G  V+        G+ ++       GRV++A G+P+DG  +  K   S  + +
Sbjct: 84  HVDGVLPGTRVYAPDGDSYEGK-QLPVGPQLLGRVLDAQGRPLDGRPAPLKTS-SASLFT 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           +    ++R  ++     G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +
Sbjct: 142 QPINPLHRDPIKSVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTDADVI 201

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ L+GERGREV++FIE+ LG + ++++VV+ A +D SP+LR    + A  +AE F  +G
Sbjct: 202 VVGLIGERGREVKDFIENILGAEGIERAVVIAAPADVSPVLRMQGAVYATRLAEDFRDRG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            NVLLI+DS+TRFA + RE+A   GE P  +GYP SVF+ LP L+ER G      G++TA
Sbjct: 262 MNVLLIMDSLTRFAMAQREVALAIGEPPATKGYPPSVFARLPALVERAGNGVAGGGSVTA 321

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR   +     +
Sbjct: 322 FYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIPHAQ 381

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            + V S    +  ++   D+  +G Y  G D +LD+A+ + P +  +L Q+  +      
Sbjct: 382 YRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDALLDRAIARYPQMESYLHQAVHESCGYAE 441

Query: 430 FQEITKKL 437
                  L
Sbjct: 442 AVSALSAL 449


>gi|310818216|ref|YP_003950574.1| ATP synthase subunit beta [Stigmatella aurantiaca DW4/3-1]
 gi|309391288|gb|ADO68747.1| ATP synthase subunit beta [Stigmatella aurantiaca DW4/3-1]
          Length = 481

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 25/422 (5%)

Query: 20  VVQGGYISSITSVYYTVT----CLSQ---YVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           V   G I+ +      V      L +    + + +  +   +++  +     +  ++V  
Sbjct: 5   VATVGKITQVLGPVIDVEFPPGGLPEVYTALKVTNASISAEEDNLTIEVAQHLGENMVRC 64

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E ++ G  V + G   ++       GR++N +G P+D    +     +  I   
Sbjct: 65  ISMDSTEGLARGQAVKNTGAPIQVPVGKGTLGRILNVIGAPVDERGPI-TSQQTWPIHRP 123

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  + +    + F+TGI+VID+  P   G +IG+F G+G+GK+ LL    R+   ++  
Sbjct: 124 APTFVEQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELIRNVAKERGG 183

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +    N          + V+V    +E P  R    L+A+T
Sbjct: 184 FSVFAGVGERTREGNDLYHEMQEGNVINTKNLEESQCVLVYGQMNEPPGARARVALSALT 243

Query: 241 IAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           IAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 244 IAEYFRDVEGRDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGALQERI-- 301

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +   KG++T+V ++ V  D+  DP   +  + LD   VLNR+++E G YP VDPL S SR
Sbjct: 302 TSTNKGSVTSVQAIYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSR 361

Query: 360 LADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           + D      +   +   +  ++ +++E +DI  I G     +      V +   I  FL 
Sbjct: 362 ILDPNVVGPEHYAVARKVQGILQKYKELQDIIAILGMDELSEAD-KLTVARARKIQKFLS 420

Query: 419 QS 420
           Q 
Sbjct: 421 QP 422


>gi|302747398|gb|ADL63180.1| Atp1 [Citrus limon]
          Length = 343

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/347 (26%), Positives = 150/347 (43%), Gaps = 19/347 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 1   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 57

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 58  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 116

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDY-LGD 212
            +      GK+ +      +                 +   VG++   V + ++    G+
Sbjct: 117 LIIGDRQTGKTAIAIDTILNQKEMNSRATSESETLYCVYVAVGQKRSTVAQLVQILSEGN 176

Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
            L+ S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 177 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 236

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 237 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 296

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           I DG I L   L   G  P ++   SVSR+   A     KK+  SL 
Sbjct: 297 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKKVCGSLK 343


>gi|150187354|emb|CAK30235.1| ATP synthase alpha subunit [Streptococcus suis]
          Length = 367

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 161/375 (42%), Gaps = 14/375 (3%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
                 L   +  G+ +V +      +G    +  + V I  +G   +I  G +V   G+
Sbjct: 1   IARAQGLDNAMS-GELLVFENG---TIGMAQNLETNDVGIIILGQFTDIREGSVVRRTGK 56

Query: 93  FR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
              +   +   GRVIN LG+P+DG   + +   +  I    P  M R+ V +  +TG++ 
Sbjct: 57  IMEVPVGSALIGRVINPLGQPVDGLGEI-RTSKTRPIEYPAPGVMQRKSVNEPLQTGLKA 115

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDY 209
           ID   P+  GQR  +      GK+++      +        I   +G++   VR  +E  
Sbjct: 116 IDALVPIGRGQRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETL 175

Query: 210 LGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268
                   ++VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE
Sbjct: 176 RQYGALDYTIVVTASASQPSPLLFLAPYAGVAMAEEFMYEGKHVLIVYDDLSKQAVAYRE 235

Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIAD 326
           ++      P    YP  VF    RLLER      E   G+ITA+  +     + +  IA 
Sbjct: 236 LSLLLRRPPGREAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIAT 295

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           +V SI DG I L   L   G  P +D  +SVSR+   A     KK+  +L   +  + E 
Sbjct: 296 NVISITDGQIFLKDDLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRIDLASYREL 355

Query: 387 RDIRLIGGYRPGVDL 401
                   +   +D 
Sbjct: 356 E---AFTQFGSDLDA 367


>gi|306996341|gb|ADN21390.1| ATP synthase beta subunit [Rhizobium loessense]
          Length = 378

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 171/369 (46%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G    +       GR++N +G+P+D    L    
Sbjct: 12  LGENEVRTIAMDSSEGLVRGQEVVDTGAPISVPVGPETLGRIMNVIGEPVDEAGPLVTAS 71

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  +++    +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 72  KRA-IHQDAPSYVDQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 130

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   + +        G    K+ +V    +E P  R 
Sbjct: 131 NVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKHGGGEGSKAALVYGQMNEPPGARA 190

Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
              LT +T+AE F  +G +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +
Sbjct: 191 RVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQ 250

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +     +IT+V ++ V  D+  DP   +  + LD   VL+RS+AE+G YP VD
Sbjct: 251 MQERITTTTTG--SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVD 308

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +  ++   +   + R++  +DI  I G     +     AV +  
Sbjct: 309 PLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQDIIAILGMDELSEED-KLAVARAR 367

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 368 KIERFLSQP 376


>gi|282849843|ref|ZP_06259227.1| ATP synthase F1, beta subunit [Veillonella parvula ATCC 17745]
 gi|294792757|ref|ZP_06757904.1| ATP synthase F1, beta subunit [Veillonella sp. 6_1_27]
 gi|282580780|gb|EFB86179.1| ATP synthase F1, beta subunit [Veillonella parvula ATCC 17745]
 gi|294456656|gb|EFG25019.1| ATP synthase F1, beta subunit [Veillonella sp. 6_1_27]
          Length = 474

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 175/381 (45%), Gaps = 14/381 (3%)

Query: 51  HQGKNSDNLGQVIR----INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
           H  K  D    V+     +  D V    +   + ++        G    +       GR+
Sbjct: 36  HDHKAHDRQKIVVEVMQHLGDDTVRCVAMSSTDGMTRNMEAEDTGAPISVPVGEGVLGRI 95

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G +IG
Sbjct: 96  FNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKGGKIG 155

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           +F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+ +V 
Sbjct: 156 LFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKTALVY 215

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +P A 
Sbjct: 216 GQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRMPSAV 275

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   VL+R
Sbjct: 276 GYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLSR 333

Query: 341 SLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           S+AE G YP VDPL S SR+ D      +   +   +  ++ ++ + +DI  I G     
Sbjct: 334 SIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILGMEELS 393

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  FL Q 
Sbjct: 394 DED-KLTVSRARKIQRFLSQP 413


>gi|115439241|ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group]
 gi|113533431|dbj|BAF05814.1| Os01g0685800 [Oryza sativa Japonica Group]
          Length = 557

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + H  +    + Q +    ++V    +   E 
Sbjct: 87  GQVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLG--ENMVRTIAMDGTEG 144

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR++N +G+PID    +      + I  + P  + + 
Sbjct: 145 LVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHF-LPIHREAPAFVEQA 203

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 204 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 263

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 264 ERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 323

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 324 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 381

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 382 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVL 441

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 442 GEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 495


>gi|329121453|ref|ZP_08250077.1| ATP synthase F1 sector beta subunit [Dialister micraerophilus DSM
           19965]
 gi|327469368|gb|EGF14838.1| ATP synthase F1 sector beta subunit [Dialister micraerophilus DSM
           19965]
          Length = 477

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 186/413 (45%), Gaps = 17/413 (4%)

Query: 22  QGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVI-----RINLDIVYICP 74
           Q G +  +      +      +   + + +  + +N +    VI      +   +V    
Sbjct: 8   QVGKVVQVIGAVVDIAFKDDQELPAIYNAIHVKDENGNVPVDVICETMQHLGDGVVRAVA 67

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G      GR   +       GR+ N LG+ +D      K      I    P
Sbjct: 68  MSSTDGMVRGMKAVDTGRAIAVPVGDGCLGRIFNVLGQTVDNGTEEVKASDYWPIHRVAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---V 190
              ++    + F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     
Sbjct: 128 AFKDQAPAAEIFETGIKVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCS 187

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +     +  K+ +V    +E P  R    LT +T++EYF  K 
Sbjct: 188 VFCGVGERTREGNDLWGEMKESGVLSKAALVYGQMNEPPGARMRVALTGLTMSEYFRDKQ 247

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+IT
Sbjct: 248 GQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSIT 305

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SA 367
           +V +V V  D+  DP    V + LD   VLNRS+AE G YP VDPL S SR+ D      
Sbjct: 306 SVQAVYVPADDLTDPAPAGVFTHLDATTVLNRSIAELGIYPAVDPLDSTSRILDPNTLGE 365

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++   +  ++ R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 366 EHYEVARGVQAILQRYKELQDIIAILGMEELSDED-KVIVARARKIQRFLSQP 417


>gi|4519318|dbj|BAA75574.1| ATP synthase beta-subunit [Gonium viridistellatum]
 gi|21956010|dbj|BAC06375.1| ATP synthase beta-subunit [Gonium viridistellatum]
          Length = 376

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVVVSE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|219856596|ref|YP_002473718.1| hypothetical protein CKR_3253 [Clostridium kluyveri NBRC 12016]
 gi|219570320|dbj|BAH08304.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 466

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/405 (27%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +    + +  + + +  +  N+  + +V   +  DIV    +   + +
Sbjct: 7   GKVVQVIGPVVDIKFDEENLPDIYNAISIESGNAKIITEVAQHLGDDIVRTISMESTDGL 66

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+PID +  + + D    I    P   ++  
Sbjct: 67  MRGMDALDIGAPISVPVGKPVLGRLFNMLGQPIDENGEV-EADEYSPIHRPAPSFEDQSV 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ ++     +   +     + + VGE
Sbjct: 126 KPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVIIQELINNIAKEHGGLSVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AE+F  +G +VLL +
Sbjct: 186 RTREGNDLYYEMQESGVINKTALVFGQMNEPPGARMRVALTGLTMAEHFRDEGQDVLLFI 245

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 246 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGSLQERI--TSTKHGSITSVQAVYVP 303

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS++E G YP VDPLAS SR+ D      +  K+ S 
Sbjct: 304 ADDLTDPAPATTFTHLDATTVLSRSISEIGIYPAVDPLASTSRILDPRVVGEEHYKVASD 363

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + H++ R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 364 VKHILERYSELQDIIAILGVDELSEED-RLVVIRARRIQRFLSQP 407


>gi|149798709|gb|ABR32045.1| ATP synthase beta chain [Ochropteris pallens]
 gi|149798739|gb|ABR32060.1| ATP synthase beta chain [Pteris tremula]
          Length = 426

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|42558424|gb|AAS19921.1| ATP synthase beta chain [Terpsichore subtilis]
          Length = 422

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + + +    I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPV-RSNAIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|294794509|ref|ZP_06759645.1| ATP synthase F1, beta subunit [Veillonella sp. 3_1_44]
 gi|294454839|gb|EFG23212.1| ATP synthase F1, beta subunit [Veillonella sp. 3_1_44]
          Length = 474

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 175/381 (45%), Gaps = 14/381 (3%)

Query: 51  HQGKNSDNLGQVIR----INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
           H  K  D    V+     +  D V    +   + ++        G    +       GR+
Sbjct: 36  HDHKAHDRQKIVVEVMQHLGDDTVRCVAMSSTDGMTRNMEAEDTGAPISVPVGEGVLGRI 95

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G +IG
Sbjct: 96  FNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKGGKIG 155

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           +F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+ +V 
Sbjct: 156 LFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKTALVY 215

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +P A 
Sbjct: 216 GQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRMPSAV 275

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   VL+R
Sbjct: 276 GYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLSR 333

Query: 341 SLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           S+AE G YP VDPL S SR+ D      +   +   +  ++ ++ + +DI  I G     
Sbjct: 334 SIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILGMEELS 393

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  FL Q 
Sbjct: 394 DED-KLTVSRARKIQRFLSQP 413


>gi|290745879|gb|ADD51608.1| ATP synthase beta chain [Melpomene vernicosa]
          Length = 411

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 16  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 75

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 76  IFNVLGEPVDNLGPVRSSVIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 134

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 135 GLFGGAGVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNIS 194

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 195 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 255 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 312

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 313 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 372

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 373 ILGLDELSEED-RLTVARARKIERFLSQP 400


>gi|289666084|ref|ZP_06487665.1| flagellum-specific ATP synthase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 458

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 144/427 (33%), Positives = 223/427 (52%), Gaps = 5/427 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           E  +   +++ G +     +    T       +G     +        +V+    +  Y+
Sbjct: 30  EPTAGRTLIREGILRRAVGLTLEATG--CEAPMGATCKVEVDGGWVDAEVVGFAGERTYL 87

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      +     V    R   +       GRVI++ G P+DG   + + + S+ +   
Sbjct: 88  MPSAELHGLLPNARVVPSRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RAEGSVGMAGV 146

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ +      G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D ++
Sbjct: 147 SINPLAREPITTSLDVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIV 206

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVR+F+      + L+++VVV A +D  P+ R      A  IAE+F  +G 
Sbjct: 207 VGLIGERGREVRDFVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGL 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA 
Sbjct: 267 NVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAF 326

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +
Sbjct: 327 YTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWR 386

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
             +  L  L+  +   RD+  IG Y+ G D   D+A+ + P I +FL Q     S     
Sbjct: 387 LRIRKLKRLLSAYTANRDLIAIGAYQRGSDPATDEALARWPEIVEFLGQDVHKASLLSDS 446

Query: 431 QEITKKL 437
               ++L
Sbjct: 447 LSALQQL 453


>gi|269798588|ref|YP_003312488.1| ATP synthase F1 subunit beta [Veillonella parvula DSM 2008]
 gi|269095217|gb|ACZ25208.1| ATP synthase F1, beta subunit [Veillonella parvula DSM 2008]
          Length = 474

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 175/381 (45%), Gaps = 14/381 (3%)

Query: 51  HQGKNSDNLGQVIR----INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
           H  K  D    V+     +  D V    +   + ++        G    I       GR+
Sbjct: 36  HDHKAHDRQKIVVEVMQHLGDDTVRCVAMSSTDGMTRNMEAEDTGAPISIPVGEGVLGRI 95

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG+ +D D +    D    I    P   +     +  +TGI+V+D+  P   G +IG
Sbjct: 96  FNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKGGKIG 155

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVV 221
           +F G+G+GK+ L+     +   +     + S VGER RE  +   +      + K+ +V 
Sbjct: 156 LFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKTALVY 215

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +T+AEYF   K  +VLL +D+I RF  +  E++   G +P A 
Sbjct: 216 GQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRMPSAV 275

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +++  L ERI  +  ++G+IT+V +V V  D+  DP   +  + LD   VL+R
Sbjct: 276 GYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLSR 333

Query: 341 SLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
           S+AE G YP VDPL S SR+ D      +   +   +  ++ ++ + +DI  I G     
Sbjct: 334 SIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILGMEELS 393

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  FL Q 
Sbjct: 394 DED-KLTVSRARKIQRFLSQP 413


>gi|6724283|gb|AAB51727.2| ATP synthase beta chain [Huperzia lucidula]
          Length = 454

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 170/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  +   +V ++  +  V    +   + ++    V   G    +       GR+ N LG
Sbjct: 16  GQEMNVTCEVQQLLGNNKVRAVAMSATDGLTREMKVVDTGAPLSVPVGEATLGRIFNVLG 75

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D   S+  G  S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 76  EPVDNLGSVDAGTTS-PIHRSAPAFAQSDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 134

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 135 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 194

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 195 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNILRFVQAGSEVSALLGRMPS 254

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 255 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 312

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDP  S   +       +   +    +   + R++E +DI  I G   
Sbjct: 313 SRGLAAKGIYPAVDPSDSTPTMLQPWIVGEQHYETAQEVKQTLQRYKELQDIIAILGLDE 372

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 373 SSEED-RLTVARARKIERFLSQP 394


>gi|14718206|gb|AAK72841.1| ATP synthase beta subunit [Rhynchospora nervosa]
          Length = 482

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 177/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I   V   V    +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 13  GRIAQIIGPVLDVVFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +     +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSATXGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+ GI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFEXGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIARAHGGVS 189

Query: 194 LVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G  G   RE      +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGDDLYMEMKESGVINEXNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V PL S S + 
Sbjct: 308 TKKGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPNIVGNEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|20269396|gb|AAM17925.1| ATP synthase beta subunit [Barringtonia asiatica]
          Length = 387

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +        R+ N LG+PID    +    
Sbjct: 3   LGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLXRIFNVLGEPIDNLGPVD-TR 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  TTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELII 121

Query: 184 SDCFDKVIISLVGERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G  G   RE                      K  +V    +E P  R 
Sbjct: 122 NIAKAHGGVSVFGGVGERTREGIDLYMXMXESGVINEQNIAESKVALVYGQMNEPPGARM 181

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 182 RVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 241

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 242 SLQERI--TXTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 299

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 300 DPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 358

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 359 RKIERFLSQP 368


>gi|227892670|ref|ZP_04010475.1| F0F1 ATP synthase subunit beta [Lactobacillus ultunensis DSM 16047]
 gi|227865541|gb|EEJ72962.1| F0F1 ATP synthase subunit beta [Lactobacillus ultunensis DSM 16047]
          Length = 479

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 183/379 (48%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V + K+   + +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VLKSKDESIVLEVTLELGDGVLRTIAMESTDGLQRGMKVEDTGAPISVPVGEDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPEFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   +  FL Q+
Sbjct: 391 E-KLIVARARKVQFFLSQN 408


>gi|179184106|gb|ACB78136.1| ATPase [Vibrio lentus]
          Length = 400

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/402 (23%), Positives = 170/402 (42%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L+  V  G+ +   G         + +N D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  G V+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPEMLGCVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+  
Sbjct: 176 ALANTVVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEK-------------EKGNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +             + G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVSEAYVEKFTNGEVTGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 LAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMKQKQ 394


>gi|302747600|gb|ADL63281.1| Atp1 [Polygala cruciata]
          Length = 349

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G    +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIAWNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|284049042|ref|YP_003399381.1| ATP synthase F1, beta subunit [Acidaminococcus fermentans DSM
           20731]
 gi|283953263|gb|ADB48066.1| ATP synthase F1, beta subunit [Acidaminococcus fermentans DSM
           20731]
          Length = 491

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 192/411 (46%), Gaps = 17/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNL-----GQVIR-INLDIVYICPVG 76
           G +  +      +    + +  + + +V   + S N+      +V++ I  D+V    + 
Sbjct: 25  GRVVQVMGPVVDIRFPDKELPAIYNAIVIDARASKNIHVHLTAEVVQHIGHDVVRTVAMS 84

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G      G+   +       GRV N LG+ +D D +  +      I    P  
Sbjct: 85  STDGLTRGMEALDTGKPITVPVGKGCLGRVFNVLGETVDDDPTPVQASDYWPIHRPAPDL 144

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            ++    K  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + 
Sbjct: 145 ADQATETKIMETGIKVVDLIAPYSLGGKIGLFGGAGVGKTVLIMELIHNVATNHGGYSVF 204

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GD 250
           S VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF    G 
Sbjct: 205 SGVGERTREGNDLWGEMKESGVIDKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDVGGQ 264

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    G+IT+V
Sbjct: 265 DVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLANEMGALEERI--TSTRSGSITSV 322

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            +V V  D+  DP   +  + LD   VL+R + E G YP VDPLAS SR+ D     D  
Sbjct: 323 QAVYVPADDLTDPAPAATFAHLDATTVLSREIVELGIYPAVDPLASTSRILDPLVIGDEH 382

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            ++   +  ++ R++E +DI  I G    ++      V +   +  FL Q 
Sbjct: 383 YQVARGVQKILQRYKELQDIIAILGMEE-LNEQDKLTVSRARKVQRFLSQP 432


>gi|153956279|ref|YP_001397044.1| F0F1 ATP synthase subunit beta [Clostridium kluyveri DSM 555]
 gi|190358660|sp|A5N3H7|ATPB_CLOK5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146349137|gb|EDK35673.1| AtpD [Clostridium kluyveri DSM 555]
          Length = 464

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/405 (27%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      +    + +  + + +  +  N+  + +V   +  DIV    +   + +
Sbjct: 5   GKVVQVIGPVVDIKFDEENLPDIYNAISIESGNAKIITEVAQHLGDDIVRTISMESTDGL 64

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G      G    +       GR+ N LG+PID +  + + D    I    P   ++  
Sbjct: 65  MRGMDALDIGAPISVPVGKPVLGRLFNMLGQPIDENGEV-EADEYSPIHRPAPSFEDQSV 123

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             + F+TGI+VID+  P   G +IG+F G+G+GK+ ++     +   +     + + VGE
Sbjct: 124 KPEMFETGIKVIDLIAPYQKGGKIGLFGGAGVGKTVIIQELINNIAKEHGGLSVFTGVGE 183

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R RE  +   +      + K+ +V    +E P  R    LT +T+AE+F  +G +VLL +
Sbjct: 184 RTREGNDLYYEMQESGVINKTALVFGQMNEPPGARMRVALTGLTMAEHFRDEGQDVLLFI 243

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V 
Sbjct: 244 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGSLQERI--TSTKHGSITSVQAVYVP 301

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSS 375
            D+  DP   +  + LD   VL+RS++E G YP VDPLAS SR+ D      +  K+ S 
Sbjct: 302 ADDLTDPAPATTFTHLDATTVLSRSISEIGIYPAVDPLASTSRILDPRVVGEEHYKVASD 361

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           + H++ R+ E +DI  I G     +      V +   I  FL Q 
Sbjct: 362 VKHILERYSELQDIIAILGVDELSEED-RLVVIRARRIQRFLSQP 405


>gi|119350541|gb|ABL63221.1| AtpB [Radiofilum conjunctivum]
          Length = 393

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 166/366 (45%), Gaps = 18/366 (4%)

Query: 69  IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   D  + 
Sbjct: 4   TVRAVSMSATDGLMRGMEVIDSGKPLTVPVGQSTLGRIFNVLGEPVDNLGPVDAKDG-LP 62

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   
Sbjct: 63  IHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAK 122

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
               +S+ G   ER RE  +   +               K  +V    +E P  R    L
Sbjct: 123 AHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGL 182

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L E
Sbjct: 183 TALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQE 242

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL 
Sbjct: 243 RI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLD 300

Query: 356 SVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +       D   +   ++   + R++E +DI  I G     +      V +   I 
Sbjct: 301 STSTMLQPWIVGDTHYQTAQNVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIE 359

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 360 RFLSQP 365


>gi|16080734|ref|NP_391562.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311641|ref|ZP_03593488.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315969|ref|ZP_03597774.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320880|ref|ZP_03602174.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325165|ref|ZP_03606459.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313231|ref|YP_004205518.1| F0F1 ATP synthase subunit beta [Bacillus subtilis BSn5]
 gi|584808|sp|P37809|ATPB_BACSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta; AltName: Full=Vegetative protein 31; Short=VEG31
 gi|433991|emb|CAA82260.1| ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2636206|emb|CAB15698.1| ATP synthase (subunit beta, component F1) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291486264|dbj|BAI87339.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019505|gb|ADV94491.1| F0F1 ATP synthase subunit beta [Bacillus subtilis BSn5]
          Length = 473

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G      G    +       GRV N LG+ ID ++ + 
Sbjct: 51  ALHLGDDTVRTIAMASTDGVQRGMEAVDTGAPISVPVGDVTLGRVFNVLGENIDLNEPVP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      + K+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEHFRDVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   +   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELGEED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|292572450|gb|ADE30365.1| ATP synthase beta chain [Rickettsia prowazekii Rp22]
          Length = 474

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 20/420 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           ++N+      IS++  V +T       + L     +  K    L     I  D V    +
Sbjct: 2   TQNIGKITQVISAVVDVKFTNNGKLPEI-LNALECYNDKQRIVLEVAQHIGDDTVRCIAM 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   RI       GR++N LG+PIDG   +    +S  I    P 
Sbjct: 61  DSTEGLIRGLEVIDTGNPIRIPVGTETLGRIMNVLGEPIDGKGEIKSATIS-SIYKPAPD 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
            +N+        TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 120 FINQSTERDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTV 179

Query: 192 ISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +   + +             K  +V    +E P  R    L+ +TIAE
Sbjct: 180 FAGVGERTREGNDLYHEMIASGVINLEEPEKSKVALVYGQMNEPPGARARVALSGLTIAE 239

Query: 244 --YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                + G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 240 SFRDMNAGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ 
Sbjct: 298 TKHGSITSVQAIYVPADDLTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVL 357

Query: 362 DKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D     +    +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 DPMIVGEKHYGVARQVQQVLQTYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 416


>gi|255733360|gb|ACU31112.1| ATP synthase beta subunit [Childia sp. MR-2009]
          Length = 427

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 169/369 (45%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G    I       GR+IN +G+PID    L    
Sbjct: 26  LGENTVRTIAMDGTEGLVRGQKVQDTGSPITIPVGPETLGRIINVIGEPIDERGPLN-AK 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  ++    ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  KYLPIHQDAPAFVDMSVEQEILETGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D   K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYHEMITGGVISLKDKSSKVALVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ ++   
Sbjct: 205 VALTGLTVAEYFRDYEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDTGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VD
Sbjct: 265 MQERI--TTTKKGSITSVQAIFVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVD 322

Query: 353 PLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D     +    +   +  ++  ++  +DI  I G     +      V +  
Sbjct: 323 PLDSTSRIMDFNIVGETHYNIARGVQKILQDYKSLQDIIAILGMDELSEED-KLTVSRAR 381

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 382 KIQKFLSQP 390


>gi|165933793|ref|YP_001650582.1| F0F1 ATP synthase subunit beta [Rickettsia rickettsii str. Iowa]
 gi|165908880|gb|ABY73176.1| ATP synthase beta chain [Rickettsia rickettsii str. Iowa]
          Length = 499

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/424 (26%), Positives = 186/424 (43%), Gaps = 22/424 (5%)

Query: 15  YSKNLVVQGGYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVY 71
             K +    G I+ I S    V  T   +   + + +         + +V   I  D V 
Sbjct: 23  KEKIMTKNIGKITQIISAVVDVKFTNNGKLPEILNALECYNDTRRVVLEVAQHIGDDTVR 82

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   E +  G  V   G   RI       GR++N +G+PIDG   +   ++S  I  
Sbjct: 83  CIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNIS-SIYK 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P   N+        TGI+VID+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 142 PAPDFTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 201

Query: 191 ---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAV 239
              + + VGER RE  +   + +             K  +V    +E P  R    L+ +
Sbjct: 202 GYTVFAGVGERTREGNDLYHEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGL 261

Query: 240 TIAE--YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           TIAE     ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI
Sbjct: 262 TIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI 321

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S 
Sbjct: 322 --TSTKHGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSN 379

Query: 358 SRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           S++ D     +E   +   +  ++  ++  +DI  I G     +      V +   I  F
Sbjct: 380 SQVLDPMIVGEEHYSVARQVQQVLQTYKSLQDIITILGMDELSEED-KLTVARARKIQRF 438

Query: 417 LKQS 420
           L Q 
Sbjct: 439 LSQP 442


>gi|312865035|ref|ZP_07725263.1| ATP synthase F1, beta subunit [Streptococcus downei F0415]
 gi|311099146|gb|EFQ57362.1| ATP synthase F1, beta subunit [Streptococcus downei F0415]
          Length = 468

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 16/413 (3%)

Query: 21  VQGGYISSITSVYYTVTCLS--QYVCLGDFVVHQGKNSDNLGQVIRINLD----IVYICP 74
           +  G I+ +      V   +  +   + + +V    N      V+ + L+    +V    
Sbjct: 1   MSSGKIAQVVGPVVDVKFATGDKLPEINNALVVYKDNDQKEKIVLEVALELGDGVVRTIA 60

Query: 75  VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + ++ G  V   G    +       GRV N LG  ID ++   +      I  K P
Sbjct: 61  MESTDGLTRGLEVLDTGSAISVPVGKETLGRVFNVLGDTIDLEEPFAQDAQREPIHKKAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                    +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   IS
Sbjct: 121 SFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS 180

Query: 194 L---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +   VGER RE  +   +      ++K+ +V    +E P  R    LT +T+AEYF    
Sbjct: 181 VFTGVGERTREGNDLYGEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTLAEYFRDVE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSA 367
           ++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLAS SR LA +    
Sbjct: 299 SIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQIGIYPAVDPLASSSRALAPEIVGE 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +  ++ + +  ++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EHYQVATEVQRVLQRYNELQDIIAILGMDELSDDE-KVLVGRARRIQFFLSQN 410


>gi|187251924|ref|YP_001876406.1| F0F1 ATP synthase subunit beta [Elusimicrobium minutum Pei191]
 gi|186972084|gb|ACC99069.1| ATP synthase F1, beta subunit [Elusimicrobium minutum Pei191]
          Length = 484

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 116/415 (27%), Positives = 196/415 (47%), Gaps = 19/415 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIG 78
           +  G ++ +      +      +  + + V  +      + +V  ++  + V    +   
Sbjct: 1   MNTGIVTQVIGPVIDIEFKDGALPKINNAVEIKFGEQKIVAEVAQQLGDNTVRAVALSPT 60

Query: 79  EEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + ++ G + V      R+       GR++N LG PID    + K D  M I  + P    
Sbjct: 61  DGLARGVEAVDTEDVLRVPVGEGCRGRLMNVLGAPIDYAGEI-KTDKKMPIHREPPTLEE 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           ++   + F+TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +     +   
Sbjct: 120 QKTTPEIFETGIKVVDLLAPYMKGGKVGLFGGAGVGKTVLIMELINNVAREHSGSSVFGG 179

Query: 195 VGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           VGER RE  +   D  G  L        K+V+V    +E P  R    LTA+T AEYF  
Sbjct: 180 VGERSREGNDLWLDMKGAELADGSTVLDKTVLVFGQMNEPPGARAKVALTALTQAEYFRD 239

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VLL LD+I R+  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG+
Sbjct: 240 EKGQDVLLFLDNIFRYVLANSEVSALLGRMPSAVGYQPTLNTEIGQLQERI--TSTNKGS 297

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT++ +V V  D+  DP   S  + LD   VL+RSL E G YP VDPL S SR+ D    
Sbjct: 298 ITSIQAVYVPADDLTDPGVASTFTHLDATTVLSRSLVELGIYPAVDPLESTSRILDPRVL 357

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++   +  ++ R+++ +D+  I G     D    K V +   I  FL Q 
Sbjct: 358 GEEHYQVAQGVRKILQRYKDLQDLIAILGIDELGDED-KKIVARARRIQRFLSQP 411


>gi|46909271|gb|AAT06153.1| ATP synthase beta subunit [Monosiga brevicollis]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/375 (27%), Positives = 175/375 (46%), Gaps = 17/375 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G  V   G   ++       GR++N +G+PID    + K D
Sbjct: 26  LGENTVRTIAMDGTEGLVRGQPVVDTGDAIKVPVGEATLGRIMNVIGEPIDERGPI-KAD 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P   + +   +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  KYAPIHAEAPELEDMRPEAEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMA 234
           +         + + VGER RE  +   + +       +   K  +V    +E P  R   
Sbjct: 145 NVAKAHSGFSVFAGVGERTREGNDLYHEMIEGGVIQLEGDSKVALVYGQMNEPPGARARV 204

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN-SGELPVARGYPTSVFSELPRL 293
            LT +T+AE F  +G +VLL +D+I RF     E++    G +P A GY  ++ +++  +
Sbjct: 205 ALTGLTVAESFRDQGRDVLLFIDNIFRFTQDGSEVSALFLGRIPSAVGYQPTLATDMGAM 264

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +    G+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDP
Sbjct: 265 QERI--TTTTVGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDP 322

Query: 354 LASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S SR+ D         K    +  ++  ++  +DI  I G     +      V +   
Sbjct: 323 LDSTSRILDVSVVGERHYKTARDVQKILQDYKSLQDIIAILGMDELSEDD-KMTVARARK 381

Query: 413 IYDFLKQSPSDLSSE 427
           I  FL Q P ++++ 
Sbjct: 382 IQRFLSQ-PFEVAAP 395


>gi|133917180|emb|CAJ33231.1| ATP synthase alpha subunit [Lactobacillus johnsonii]
          Length = 349

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 152/352 (43%), Gaps = 10/352 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGD 116
           + G    +  + V I  +G  ++I  GD V   GR   +       GRV+N LG+P+DG 
Sbjct: 2   SYGIAQNLEANDVGIIILGRFDDIREGDQVKRTGRIMEVPVGDQLIGRVVNPLGQPVDGL 61

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + K D +  I SK P  M+RQ V +  +TGI+ ID   P+  GQR  +      GK+ 
Sbjct: 62  GEI-KTDKTRPIESKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTA 120

Query: 177 LLSMFARSDCF--DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           L      +        I   +G++   V+  +E       +  ++VV A   E   +  +
Sbjct: 121 LALDTIINQKGQDVICIYVAIGQKESTVKNSVETLKRFGAMDYTIVVEAGPSEPAPMLYI 180

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A + REI+      P    YP  VF    RL
Sbjct: 181 APYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYREISLLLRRPPGREAYPGDVFYLHSRL 240

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P +
Sbjct: 241 LERSAKLNKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLEADLFFAGTRPAI 300

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           +   SVSR+   A     KK+  +L   +  + E       G     +D   
Sbjct: 301 NAGESVSRVGGSAQIKAMKKVAGTLRVDLASYRELESFAQFG---SDLDQAT 349


>gi|126738584|ref|ZP_01754289.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. SK209-2-6]
 gi|126720383|gb|EBA17089.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter
           sp. SK209-2-6]
          Length = 442

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 168/418 (40%), Positives = 256/418 (61%), Gaps = 5/418 (1%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           M   L+ L +      + LV Q G ++ IT     ++ L ++  +GD +V Q    D+L 
Sbjct: 1   MIAELKALTEQI--AGRKLVTQMGRVTGITGGEIEISGLEKHARIGDRLVLQRGPKDHLH 58

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V++I++  + + P    + +++GD V        +PS  W GRVI+  G+P+DG   L
Sbjct: 59  GEVLKIDVSKISMLPDRAPDRVAIGDRVLLHPAADFAPSDNWVGRVIDPFGEPLDGRPML 118

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G  + ++M+  P A  R+++     TG+ V++   P+  GQR+G+FAGSG+GKSTLL+
Sbjct: 119 -RGSEARDLMAPPPKAAGRRQMGARLATGLSVLNTILPVVQGQRVGLFAGSGVGKSTLLA 177

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A+S   D V+++L+GERGREV  F+E+ LG + +K+++VV ATSD+S ++R+    +A
Sbjct: 178 KLAQSMEADVVVMALIGERGREVNHFVEEVLGPEGMKRAIVVAATSDQSALVRRRCAWSA 237

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           +TIAE+F  +G NVL + DS+TRFA + REIA  SGE P  RGYP SV   +  L ER G
Sbjct: 238 MTIAEHFRDQGKNVLFMADSVTRFAEAHREIAAASGEAPALRGYPPSVTPLITGLCERAG 297

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G+ITAV SVLV G +  +PIAD +R +LDGHIVLNR +AE GR+P +D   SVS
Sbjct: 298 PGAEGHGDITAVFSVLVAGSDMEEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVS 357

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           R    A + DE  ++  +   +  +E++  +   G Y  G DL+LD+AV   P +  F
Sbjct: 358 RSLPAAATDDENAMILEVRKYLGSYEQSEVMIRAGLYSEGNDLVLDQAVKLWPELDSF 415


>gi|42558366|gb|AAS19892.1| ATP synthase beta chain [Leucotrichum schenckii]
          Length = 422

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSTAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|323140893|ref|ZP_08075806.1| ATP synthase F1, beta subunit [Phascolarctobacterium sp. YIT 12067]
 gi|322414631|gb|EFY05437.1| ATP synthase F1, beta subunit [Phascolarctobacterium sp. YIT 12067]
          Length = 448

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/369 (28%), Positives = 176/369 (47%), Gaps = 11/369 (2%)

Query: 60  GQVIR-INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117
            +V++ I  +IV    +   + +  G  V   G    +       GR+ N LG+ +D DD
Sbjct: 25  AEVMQHIGNNIVRAVAMSSTDGLVRGMEVVDTGAPISVPVGPGVLGRIFNVLGETVDHDD 84

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
           +  +      I    P    +    K  +TGI+V+D+  P   G +IG+F G+G+GK+ +
Sbjct: 85  TPVEAADHWPIHRPAPSFDQQATATKILETGIKVVDLIAPYAMGGKIGLFGGAGVGKTVI 144

Query: 178 LSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233
           +     +         + + VGER RE  +   +      + K+ +V    +E P  R  
Sbjct: 145 IMELIHNIATAHGGYSVFAGVGERTREGNDLWGEMKESGVINKTALVYGQMNEPPGARMR 204

Query: 234 APLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF    G +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VGLTGLTMAEYFRDVGGQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLANDIGA 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           L ERI  +  + G+IT+V +V V  D+  DP      + LD   VL+R +AE G YP VD
Sbjct: 265 LQERI--TSTKTGSITSVQAVYVPADDLTDPAPAGTFAHLDATTVLSRQIAELGIYPAVD 322

Query: 353 PLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D     +E   +   +  ++ R++E +DI  I G     +      V +  
Sbjct: 323 PLDSTSRILDPLVIGEEHYHVARGVQAILQRYKELQDIIAILGMEELSEED-KVTVARAR 381

Query: 412 IIYDFLKQS 420
            I  FL Q+
Sbjct: 382 KIQKFLSQA 390


>gi|149384721|gb|ABR25169.1| ATP synthase beta chain [Pleopeltis polypodioides]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 60  VTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|308175409|ref|YP_003922114.1| ATP synthase subunit beta, component F1 [Bacillus amyloliquefaciens
           DSM 7]
 gi|307608273|emb|CBI44644.1| ATP synthase (subunit beta, component F1) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328555387|gb|AEB25879.1| F0F1 ATP synthase subunit beta [Bacillus amyloliquefaciens TA208]
 gi|328913758|gb|AEB65354.1| ATP synthase (subunit beta, component F1) [Bacillus
           amyloliquefaciens LL3]
          Length = 473

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 167/366 (45%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + I  G      G    +       GRV N LG  ID ++ L 
Sbjct: 51  ALHLGDDTVRTIAMASTDGIQRGMEAVDTGAPISVPVGDVTLGRVFNVLGDKIDLNEPLP 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I    P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 ADAQKDPIHRSAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKVIISLVGERGREVRE----FIEDYLGDNLKKSVVVVATSDESPILRKMAPL 236
              +   +   IS+    G   RE    F E      +KK+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVIKKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  K   +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEHFRDKQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   +   +   + R++E +DI  I G     +      VH+   I 
Sbjct: 349 STSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELGEED-KLVVHRARRIQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|149798729|gb|ABR32055.1| ATP synthase beta chain [Pteris argyraea]
 gi|149798737|gb|ABR32059.1| ATP synthase beta chain [Pteris quadriaurita]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 160/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVHNS- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVSRA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|7708456|emb|CAB89917.1| ATP synthase beta subunit [Juncus effusus]
          Length = 489

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V        +       GR+ N LG+PID    +    
Sbjct: 68  LGNNRVRAVSMSATDGLTRGMEVIDTEAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTS- 126

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            ++ I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 127 TTLPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 186

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 187 NIAKAHGGVSVFGGVGERTREGNDLYMEMKQSGVINEKKISESKVALVYGQMNEPPGARM 246

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 247 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 306

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  +KG IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 307 SLQERI--TSTKKGAITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRPLAAKGIYPAV 364

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
            PL S S +        +  +    +     R++E +DI  + G     +      V + 
Sbjct: 365 XPLDSTSTMLQPNIVGKEHYETAQRVKQTSQRYKELQDIIAVLGLDELSEED-RLTVARA 423

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 424 RKIERFLSQP 433


>gi|330792833|ref|XP_003284491.1| hypothetical protein DICPUDRAFT_52984 [Dictyostelium purpureum]
 gi|325085521|gb|EGC38926.1| hypothetical protein DICPUDRAFT_52984 [Dictyostelium purpureum]
          Length = 652

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 102/375 (27%), Positives = 174/375 (46%), Gaps = 18/375 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +   IV    + I + +  G  V + G    +       GR++N +G+PIDG   +   +
Sbjct: 153 LGDGIVRCVALDITDGLGRGAKVLNSGAPLMVPVGNVTLGRIMNVIGEPIDGCGPINATE 212

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P            +TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 213 -RRPIWRSPPHFSELAPSASILETGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELIN 271

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +   +        K  +V    +E P  R  
Sbjct: 272 NIAKAHGGFSVFAGVGERTREGNDLYHEMVSAGVIKTDGPGSKVALVFGQMNEPPGARAR 331

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 332 VTLTGLTVAEYFRDVDGQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGS 391

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  ++K  G+IT+V +V V  D+  DP   +  + LD   VL+R+++E G YP VD
Sbjct: 392 MQERIATTKK--GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPCVD 449

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S S + D      +   + + +  ++  ++  +DI  I G    +       V +  
Sbjct: 450 PLDSTSLMMDPNIIGAEHYTVATDVQKILQEYKSLQDIIAILGMD-DLSEDQKATVFRAR 508

Query: 412 IIYDFLKQSPSDLSS 426
            I  FL Q P +++ 
Sbjct: 509 KIQRFLSQ-PFEVAQ 522


>gi|150187366|emb|CAK30239.1| ATP synthase alpha subunit [Streptococcus pluranimalium]
          Length = 367

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 155/367 (42%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G V  +  + + I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AFGMVQNLESNDIGIIVLGDFSTIREGDVVKRTGKIMEVPVGEEL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG P+DG   + K   +  +    P  M+R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGIPVDGLGDI-KTSKTRPVEEAAPGVMDRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|241912882|gb|ACS72119.1| AtpB [Ponthieva villosa]
          Length = 489

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR--------INLDIVYICP 74
           G I+ I   V   +    +   + + +V   K+ D +GQ I         +  + V    
Sbjct: 13  GRIAQIIGPVLDVIFPPGKMPNIYNALVI--KSRDTVGQQINVICEVQQLLGNNRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N +G+P+D    +     S  I    P
Sbjct: 71  MSATDGLMRGMKVIDTGAPLSVPVGGTTLGRIFNVIGEPVDNLGPVDIYTKS-PIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P     +IG+F G+G+GK+ L+     +       +S
Sbjct: 130 AFIQLDTKLSIFETGIKVVDLLAPYRRAGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 190 VFGGVGERTREGNDLYMEMKESGVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 250 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 367

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 368 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|149384737|gb|ABR25177.1| ATP synthase beta chain [Serpocaulon triseriale]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|158524730|gb|ABW71259.1| mitochondrial ATP synthase beta subunit [Plumatella repens]
          Length = 428

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/386 (27%), Positives = 177/386 (45%), Gaps = 18/386 (4%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
           +  QG+ S  + +V   +  + V    +   E +  G      G   RI       GR+I
Sbjct: 9   LEVQGRESRLILEVAQHLGENTVRTIAMDGTEGLVRGQKCVDTGFPIRIPVGPETLGRII 68

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+PID    + K D  + I  + P  ++     +   TGI+V+D+  P   G +IG+
Sbjct: 69  NVIGEPIDERGPV-KTDKFLPIHQEAPEFVDMSVQAEILVTGIKVVDLLAPYAKGGKIGL 127

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-------KK 216
           F G+ +GK+ L+     +         + + VGER RE  +   + +   +        K
Sbjct: 128 FGGASVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYREMIEGGVIDLKGKGSK 187

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G 
Sbjct: 188 VALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 247

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 248 IPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 305

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +AE G YP VDPL S SR+ D      D       +  ++  ++  +DI  I G
Sbjct: 306 TVLSRGIAELGIYPAVDPLDSSSRILDANVIGQDHYDTARGVQKILQDYKSLQDIIAILG 365

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      V +   I  FL Q 
Sbjct: 366 MDELSEED-KLTVARARKIQKFLSQP 390


>gi|71370846|gb|AAZ30652.1| ATP synthase beta subunit [Lineus viridis]
          Length = 427

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 108/386 (27%), Positives = 175/386 (45%), Gaps = 20/386 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G      G   RI       GR+IN +G+PID    +   D
Sbjct: 26  LGENTVRTIAMDGTEGLVRGQKCNDTGYPIRIPVGPETLGRIINVIGEPIDERGPV-PTD 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  RRASIHAEAPEFVEMSVQQEILATGIKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D+  K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVINLKDDSSKVSLVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VD
Sbjct: 265 MQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVD 322

Query: 353 PLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D     +E       +  ++  +   +DI  I G     +      V +  
Sbjct: 323 PLDSTSRILDPNVVGEEHYTTARGVQKILQDYRSLQDIIAILGMDELSEED-KLTVSRAR 381

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL Q        +VF     KL
Sbjct: 382 KIQKFLSQP---FQVAEVFTGSAGKL 404


>gi|149798665|gb|ABR32023.1| ATP synthase beta chain [Bommeria hispida]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|30468214|ref|NP_849101.1| ATP synthase CF1 beta subunit [Cyanidioschyzon merolae strain 10D]
 gi|75328373|sp|Q85FT2|ATPB_CYAME RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|30409314|dbj|BAC76263.1| ATP synthase CF1 beta chain [Cyanidioschyzon merolae strain 10D]
          Length = 467

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 179/414 (43%), Gaps = 20/414 (4%)

Query: 23  GGYISSITSVYYTVTCLS-QYVCLGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEE 80
            G +  I      +   S Q   L + +V +        +V ++  D  V    +   + 
Sbjct: 2   SGKVVQIIGPVLDIEFPSGQLPKLLNAIVVRDGEKSVTCEVQQLLGDNRVRAIAMSSTDG 61

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR+ N LG  +D   ++ +  +   I  + P  +  +
Sbjct: 62  LRRGIQAEDTGAPISVPVGKVTLGRIFNVLGDCVDNLGTVTRQAVQ-PIHKQAPSFVQLE 120

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 121 TKPSVFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVG 180

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +  E+               K  +     +E P  R    LTA+T+AE+F   
Sbjct: 181 ERTREGNDLYEEMKASGVIQSQNLSESKVALCYGQMNEPPGARMRVGLTALTMAEHFRDI 240

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +    G+I
Sbjct: 241 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTVDGSI 298

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       
Sbjct: 299 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVG 358

Query: 368 D-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  S +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 359 EAHYQTASRVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 411


>gi|149798723|gb|ABR32052.1| ATP synthase beta chain [Platyzoma microphyllum]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|114509228|gb|ABI75182.1| ATPase alpha subunit [Ruppia cirrhosa]
          Length = 362

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 19/366 (5%)

Query: 35  TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94
            V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G   
Sbjct: 1   RVYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIV 56

Query: 95  ISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153
             P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D
Sbjct: 57  DVPAGKSLLGRVVDALGVPIDGKGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVD 115

Query: 154 IFTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVR 203
              P+  GQR  +      GK+ +          L+  A+++     +   +G++   V 
Sbjct: 116 SLVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAMAKANDKLYCVYVAIGQKRSTVA 175

Query: 204 EFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262
           + ++     N  + S++V         L+ +AP +   + E F   G + L+I D +++ 
Sbjct: 176 QLVQILSSANALEYSILVAXXXXXXXPLQFLAPYSGCALGEDFLDNGMHALIIYDDLSKQ 235

Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNH 320
           A + R+++      P    +P  VF    RLLER     +    G++TA+  +     + 
Sbjct: 236 AVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSESTGAGSLTALPVIETQAGDV 295

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
           +  I  +V  I DG I L   L   G  P ++   SVSR+   A     K++  S    +
Sbjct: 296 SAYIPTNVIPITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLEL 355

Query: 381 HRFEET 386
            ++ E 
Sbjct: 356 AQYREV 361


>gi|241888675|ref|ZP_04775982.1| ATP synthase F1, beta subunit [Gemella haemolysans ATCC 10379]
 gi|241864698|gb|EER69073.1| ATP synthase F1, beta subunit [Gemella haemolysans ATCC 10379]
          Length = 471

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 108/377 (28%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 52  QGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINAL 109
            GK    + +V + I  ++V    +   + ++ G  V   G    +       GRV N L
Sbjct: 38  DGKKEKLVLEVSLEIGDNVVRTIAMSSTDGLNRGAEVVDTGAPITVPVGNYTLGRVFNVL 97

Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169
           G+ +D  +  G       I  + P         +  +TGI+VID+  P   G +IG+F G
Sbjct: 98  GEAVDHGEEAGAEVRKDSIHKEAPTFDELSTHVEVLETGIKVIDLLAPYIKGGKIGLFGG 157

Query: 170 SGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225
           +G+GK+ L+     +         + + VGER RE  +   +      + K+ +V    +
Sbjct: 158 AGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINKTAMVFGQMN 217

Query: 226 ESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284
           E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  
Sbjct: 218 EPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQP 277

Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344
           ++ +E+ RL ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R+L E
Sbjct: 278 TLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERALTE 335

Query: 345 EGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
            G YP VDPLAS SR LA +    +  ++ +++   + ++ E +DI  I G     D   
Sbjct: 336 MGIYPAVDPLASTSRALAPEIVGEEHYQVATTIQRTLQKYRELQDIIAILGMDELSDED- 394

Query: 404 DKAVHQVPIIYDFLKQS 420
            K V +   +  FL Q+
Sbjct: 395 KKTVDRARRVQFFLSQN 411


>gi|260800391|ref|XP_002595117.1| hypothetical protein BRAFLDRAFT_113766 [Branchiostoma floridae]
 gi|229280359|gb|EEN51128.1| hypothetical protein BRAFLDRAFT_113766 [Branchiostoma floridae]
          Length = 523

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 190/428 (44%), Gaps = 21/428 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G + ++      V        + + +    ++   + +V   +  + V    +   E + 
Sbjct: 57  GQVVAVIGAVVDVQFDGALPPILNALEVADRSPRLILEVAQHLGDNTVRTIAMDGTEGLV 116

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G +    G   RI       GR+IN +G+PID    +     +  I +  P  +     
Sbjct: 117 RGQVCTDVGSPIRIPVGPETLGRIINVIGEPIDERGPVD-SKKTAAIHADAPEFVEMSVE 175

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 176 QEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 235

Query: 199 GREVREFIEDYLGDN-------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
            RE  +   + +            K  +V    +E P  R    LT +T+AEYF  +   
Sbjct: 236 TREGNDLYHEMIESGVIDLKGDKSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQ 295

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  +KG+IT+V
Sbjct: 296 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 353

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+ D     +E 
Sbjct: 354 QAIYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSTSRILDPNIVGEEH 413

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
             +  S+   +  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 414 YTVARSVQKTLQDYKSLQDIIAILGMDELSEED-KMTVARARKIQKFLSQP---FQVAEV 469

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 470 FTGHAGKL 477


>gi|254462370|ref|ZP_05075786.1| flagellum-specific ATP synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206678959|gb|EDZ43446.1| flagellum-specific ATP synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 447

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 156/417 (37%), Positives = 248/417 (59%), Gaps = 4/417 (0%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82
           G ++ + +    +  L Q   LGD V    +  D +G +VI ++ D+  I P      +S
Sbjct: 23  GTVTHVGAGLIELDGLGQNARLGDQVNLSSRMGDAMGGEVISLSKDVTIIQPDAPLTGVS 82

Query: 83  LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           LGD     G F+ISPS  W GR+++A G P+DG   L +G+    I+   P    R+ + 
Sbjct: 83  LGDEALLDGPFQISPSDAWIGRIVDANGGPMDGR-FLPRGETPRSILGAPPNPAQRRALG 141

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +  +T + V +   P+  GQR+G+F+G G+GKS+LL+ FA     D ++I+L+GERGRE+
Sbjct: 142 RRLETSMSVFNTLLPIVRGQRLGLFSGFGVGKSSLLAHFASHMEADVIVIALIGERGREL 201

Query: 203 REFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           R F+E  LG     +SV+V ATSD++P+LR+   LTA+++AE+F  +G +VL + +SITR
Sbjct: 202 RHFVETTLGKKGMARSVIVAATSDQNPLLRRRCALTAMSVAEHFRDQGKHVLFLANSITR 261

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
            A + REIA  +GE P  RG+P S    +  L ER GP     G+ITA+ SVLV   + +
Sbjct: 262 LAEAHREIAVAAGEAPALRGFPASTSHLIMSLCERAGPGLDGGGDITALFSVLVAASDMD 321

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           +PIAD +R +LDGH+VL+R++AE GRYP +D + SVSR   +A +  E +L+++   L+ 
Sbjct: 322 EPIADIMRGVLDGHVVLDRTIAERGRYPAIDAVRSVSRSLPEAANEKENELIATARRLLG 381

Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
            ++E   +   G Y  G D +LD A+     + +F+  +   L++++ FQ +   L+
Sbjct: 382 AYDENALMIRAGLYNAGSDPLLDIAIKAYSELDNFIA-TLERLNTDNSFQRLELILR 437


>gi|170516140|gb|ACB15080.1| ATPase alpha subunit [Prumnopitys ladei]
          Length = 358

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 83/361 (22%), Positives = 149/361 (41%), Gaps = 19/361 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL--GKGDLSM 126
           V I   G    I  GDLV   G    +       GRV++ALG PIDG  +L   KG    
Sbjct: 1   VGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKALLGRVVDALGVPIDGKGALQVDKGAERR 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +  
Sbjct: 61  RVEAKAPGIIERKSVHEPLQTGLKAVDSPVPIGRGQRELIIGDRQTGKTAIAIDIILNQK 120

Query: 187 ----------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     D L  +++  AT+ +   L+ +AP
Sbjct: 121 RSHLRSGTSDSVYCVYVAIGQKRSTVAQLVQIIPEADALGYTIINAATASDPAPLQFLAP 180

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EY    G + L+I D  ++ A + R+++      P    +P  V    PRLLE
Sbjct: 181 YSGCAMGEYSRDNGMHALIIYDDPSKQAVAYRQMSLLLRRPPGREAFPGDVLYLHPRLLE 240

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +  I  +V  I DG I L   L   G  P ++ 
Sbjct: 241 RAAKRSDQSGAGSLTALPVIETQAGDVSAYIPTNVIPITDGQICLETELFYRGIRPAINV 300

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  S    + ++ E   +     +   +D      +++   +
Sbjct: 301 GLSVSRVGSAAQLKAMKQVCGSSKLELAQYRE---VAASAQFGSDLDAATQAPLNRGARL 357

Query: 414 Y 414
            
Sbjct: 358 T 358


>gi|149384543|gb|ABR25094.1| ATP synthase beta chain [Elaphoglossum flaccidum]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +            +  K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVINEENISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGAEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149798717|gb|ABR32049.1| ATP synthase beta chain [Pellaea truncata]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149798715|gb|ABR32048.1| ATP synthase beta chain [Pellaea intermedia]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|156364605|ref|XP_001626437.1| predicted protein [Nematostella vectensis]
 gi|156213313|gb|EDO34337.1| predicted protein [Nematostella vectensis]
          Length = 416

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 103/359 (28%), Positives = 171/359 (47%), Gaps = 17/359 (4%)

Query: 75  VGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G   V   G   I       GR+IN +G+PID    + + D    I ++ P
Sbjct: 1   MDGTEGLIRGQKCVDTGGPITIPVGPETLGRIINVIGEPIDERGPV-ETDKRAAIHAEAP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
             +     ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         
Sbjct: 60  EFVEMSTEQEILETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 119

Query: 191 IISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
           + + VGER RE  +   + +        D   K  +V    +E P  R    LT +T+AE
Sbjct: 120 VFAGVGERTREGNDLYHEMIMSGVINLKDKSSKVALVYGQMNEPPGARARVALTGLTVAE 179

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF  K   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  + ERI  +  
Sbjct: 180 YFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTT 237

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362
           +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D
Sbjct: 238 KKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 297

Query: 363 KAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +  ++   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 298 PNIVGTEHYEIARGVQKILQDYKSLQDIIAILGMDELSEDD-KLTVARARKIQKFLSQP 355


>gi|42558438|gb|AAS19928.1| ATP synthase beta chain [Pecluma alfredii]
          Length = 422

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLTRGMSAVDTGAPLSVPVGEITLGRISNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +  ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPV-RSSVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEKDISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDFNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|238927815|ref|ZP_04659575.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
 gi|304437791|ref|ZP_07397741.1| ATP synthase F1 sector beta subunit [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|238884362|gb|EEQ48000.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC
           43531]
 gi|304369239|gb|EFM22914.1| ATP synthase F1 sector beta subunit [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 470

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 16/410 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD----NLGQVIRINLDIV-YICPVGI 77
           G +  +      +   +  +  + + +  +GK +D       +V++   D V     +  
Sbjct: 4   GKVVQVIGPVVDIEFPAGELPEILNAIKVRGKTADHDIDLTVEVMQHLGDSVTRCIAMSS 63

Query: 78  GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G      G    +       GRV N LG+ +D +           I    P   
Sbjct: 64  TDGLMRGMEADDTGAPISVPVGEATLGRVFNVLGETVDHNPEPVGNKEVWPIHRAAPKFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IIS 193
            ++   +  +TGI+V+D+  P   G ++G+F G+G+GK+ L+     +   +     + +
Sbjct: 124 EQETSTQILETGIKVVDLIAPYSRGGKVGLFGGAGVGKTVLIMELIHNIATEHGGYSVFA 183

Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DN 251
            VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF      +
Sbjct: 184 GVGERTREGNDLWSEMTESGVIDKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +KG+IT+V 
Sbjct: 244 VLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      +  
Sbjct: 302 AVYVPADDLTDPAPAATFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPHVIGQEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           ++   +  ++ +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 362 EVARGVQAVLQKYKELQDIIAILGMEELSDED-KLTVSRARKIQRFLSQP 410


>gi|150187269|emb|CAK30211.1| ATP synthase alpha subunit [Streptococcus uberis]
          Length = 366

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/368 (25%), Positives = 156/368 (42%), Gaps = 13/368 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 6   AMSGELLEFSNG---AFGMAQNLESNDVGIIILGEFSTIREGDVVKRTGKIMEVPVGEAL 62

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 63  IGRVVNPLGQPVDGLGDIATTGFR-PVEAVAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 121

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 122 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTI 181

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F  +G +VL++ D +++ A + RE++      P 
Sbjct: 182 VVTASASQPSPLLFIAPYAGVAMAEEFMYQGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 241

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 242 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPFIETQAGDISAYIATNVISITDGQI 301

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  SL   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 302 FLQESLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 358

Query: 397 PGVDLILD 404
             +D+   
Sbjct: 359 SDLDVATQ 366


>gi|194365654|ref|YP_002028264.1| FliI/YscN family ATPase [Stenotrophomonas maltophilia R551-3]
 gi|194348458|gb|ACF51581.1| ATPase, FliI/YscN family [Stenotrophomonas maltophilia R551-3]
          Length = 461

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 142/411 (34%), Positives = 224/411 (54%), Gaps = 4/411 (0%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF 88
            +V  T+  +     LG     +  +   +  +V+    +  Y+ P      +     V 
Sbjct: 47  RAVGLTLEAVGCEAPLGASCKVEVVDGGWVDAEVVGFAGERTYLMPSAELHGLLPNARVV 106

Query: 89  HW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
               R  +       GRVI++ G P+DG   + + +  + +       + R+ + +    
Sbjct: 107 PSARRGGVEVGEGLLGRVIDSDGVPLDGKGPI-RAEGHVGMAGVSINPLAREPITQPLDV 165

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI- 206
           G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+ 
Sbjct: 166 GVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVE 225

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                + L+++VVV + +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + 
Sbjct: 226 TTLGEEGLRRAVVVASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQ 285

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD
Sbjct: 286 REIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIAD 345

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGHI+L+R +A+ G YP +D  +SVSR+  +      +  +  L  L+  +   
Sbjct: 346 AARAILDGHILLSRRVADSGLYPAIDVESSVSRVVTEIADEPWRLRIRKLKRLVSAYSAN 405

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           RD+  IG Y+ G D   D+A+ + P I +FL Q  +  +     Q   ++L
Sbjct: 406 RDLIAIGAYQRGNDAATDEALERWPEIMEFLGQDVAKAADLPHSQAALQRL 456


>gi|179184160|gb|ACB78138.1| ATPase [Vibrio gallaecicus]
          Length = 405

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/407 (23%), Positives = 171/407 (42%), Gaps = 25/407 (6%)

Query: 32  VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91
              ++  L+  V  G+ +   G         + +N D V    +G   ++  G  V   G
Sbjct: 1   GILSIHGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTG 56

Query: 92  RF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150
           R   +       GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG +
Sbjct: 57  RILEVPVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYK 115

Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIED 208
            +D   P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +  
Sbjct: 116 SVDSMIPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRK 175

Query: 209 YLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267
                    +VVVVA++  S  L+ +AP     + EYF  +G++ L++ D +++ A + R
Sbjct: 176 LEEHGALANTVVVVASASXSAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYR 235

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSE-------------KEKGNITAVISVL 314
           +I+      P    +P  VF    RLLER                   + G++TA+  + 
Sbjct: 236 QISLLLKRPPGRXAFPGDVFYLHSRLLERAARVSXAYVEKFTNGEVTGKXGSLTALPIIE 295

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
               + +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL  
Sbjct: 296 TQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSG 355

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
            +   + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 356 GIRTALAQYRE---LAAXAQFSSDLDEATKKQLDHGQKVTELMKQKQ 399


>gi|302747330|gb|ADL63146.1| Atp1 [Alnus incana subsp. rugosa]
 gi|302747334|gb|ADL63148.1| Atp1 [Ancistrocladus tectorius]
 gi|302747440|gb|ADL63201.1| Atp1 [Drosophyllum lusitanicum]
 gi|302747514|gb|ADL63238.1| Atp1 [Juglans cinerea]
 gi|302747678|gb|ADL63320.1| Atp1 [Triphyophyllum peltatum]
          Length = 349

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|149798663|gb|ABR32022.1| ATP synthase beta chain [Astrolepis sinuata]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|17939849|emb|CAC81058.1| mitochondrial F1 ATP synthase beta subunit [Arabidopsis thaliana]
          Length = 589

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 19/371 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V + G    +       GR++N LG+PID    + K +
Sbjct: 161 LGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEI-KTE 219

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  ++    ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 220 HYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELIN 279

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILR 231
           +         + + VGER RE  +   + +              K  +V    +E P  R
Sbjct: 280 NVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGAR 339

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ S+L
Sbjct: 340 ARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDL 399

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP 
Sbjct: 400 GALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPA 457

Query: 351 VDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+        +       +  ++  ++  +DI  I G     +      V +
Sbjct: 458 VDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVAR 516

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 517 ARKIQRFLSQP 527


>gi|11559348|dbj|BAB18832.1| ATP synthase beta-subunit [Pandorina morum]
          Length = 376

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++ K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMDVLDTGKPLIVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDRAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|4519316|dbj|BAA75573.1| ATP synthase beta-subunit [Gonium multicoccum]
          Length = 376

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVVVSE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKQLADSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|37543317|gb|AAL92723.1| ATP synthase beta subunit [Coleochaete conchata]
          Length = 388

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 162/364 (44%), Gaps = 18/364 (4%)

Query: 71  YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   + +  G  V   G    +       GR+ N LG+P+D    +    ++  I 
Sbjct: 1   RAVSMSATDGLMRGMDVIDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVDST-VTFPIH 59

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
              P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +     
Sbjct: 60  RSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 119

Query: 190 VIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTA 238
             +S+ G   ER RE  +   +               K  +V    +E P  R    LTA
Sbjct: 120 GGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTA 179

Query: 239 VTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 180 LTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI 239

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S 
Sbjct: 240 --TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST 297

Query: 358 SRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           S +        +  +    +   + R++E +DI  I G     +      V +   I  F
Sbjct: 298 STMLQPWIVGQEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERF 356

Query: 417 LKQS 420
           L Q 
Sbjct: 357 LSQP 360


>gi|4519304|dbj|BAA75567.1| ATP synthase beta-subunit [Tetrabaena socialis]
          Length = 376

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+PID   ++   D ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKITLGRIFNVLGEPIDNMGTVFVED-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P   +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFADLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFVDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQTVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|71276027|ref|ZP_00652308.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon]
 gi|71899448|ref|ZP_00681606.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|170729691|ref|YP_001775124.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M12]
 gi|226740694|sp|B0U598|ATPB_XYLFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71163110|gb|EAO12831.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon]
 gi|71730761|gb|EAO32834.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|167964484|gb|ACA11494.1| Sodium-transporting two-sector ATPase [Xylella fastidiosa M12]
          Length = 466

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 110/413 (26%), Positives = 177/413 (42%), Gaps = 24/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIGE 79
           G I  I      V      V      V+     D    ++     +   IV    +G  +
Sbjct: 4   GKIVQIIGAIVDVEFPRNNVP----KVYNALKIDGTAIILEVQQQLGDGIVRTIALGSTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +    +    G    +       GR+++ LG PID    +   D   EI    P   ++
Sbjct: 60  GLKRNLIATDTGHAITVPVGTGTLGRIMDVLGNPIDEAGPITYTDQ-WEIHRNAPSYEDQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 ASTTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +TIAEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTIAEYFRDEKDSSGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +    G+IT
Sbjct: 239 GKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +    LD  + L+RS+A  G YP VDPL S SR  D     +
Sbjct: 297 SIQAVYVPADDLTDPSPATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGE 356

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E       +   + ++++ +DI  I G     +     AV +   I  F  Q 
Sbjct: 357 EHYNTTQRVQQTLQKYKDLKDIIAILGMDELSEDD-KLAVSRARKIERFFSQP 408


>gi|149798705|gb|ABR32043.1| ATP synthase beta chain [Neurocallis praestantissima]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 160/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVHNS- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQKISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|11467561|ref|NP_043707.1| ATP synthase CF1 beta subunit [Odontella sinensis]
 gi|1352032|sp|P49647|ATPB_ODOSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|297868|emb|CAA51161.1| ATPase [Odontella sinensis]
 gi|1185256|emb|CAA91739.1| ATP synthase CF1 subunit beta [Odontella sinensis]
          Length = 475

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 185/417 (44%), Gaps = 21/417 (5%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGI 77
           +  GY++ I      +   S  +        +        + +V ++  D  V    +  
Sbjct: 6   INKGYVNQIIGPVLDIEFPSGTLPPIYSALKIETEDGIGTVVEVQQLLGDNKVRAVSMRS 65

Query: 78  GEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G       G   +       GR+ N +G+P+D    +   D ++ I  + P   
Sbjct: 66  TDGLKRGVEARDLGGPISVPVGISTLGRIFNVIGEPVDEQGDVSY-DETLPIHREAPAFT 124

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196
             +     F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G
Sbjct: 125 ELETKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFG 184

Query: 197 ---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
              ER RE  +  E+               K  +V    +E P  R    LTA+T+AEYF
Sbjct: 185 GVGERTREGNDLYEEMKESGVINENNFKESKVALVYGQMNEPPGARMRVGLTALTMAEYF 244

Query: 246 SS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +
Sbjct: 245 RDVNKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQ 302

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +    
Sbjct: 303 GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPG 362

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             S +  ++  ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 363 IVSGEHYEIAETVKETLQRYKELQDIIAILGIDELSEED-RLTVARARKVERFLSQP 418


>gi|156739832|gb|ABU93569.1| ATP synthase beta subunit [Nephrolepis auriculata]
          Length = 391

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 163/367 (44%), Gaps = 18/367 (4%)

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           + V    +   + ++ G      G    +       GR+ N LG+P+D    + +   + 
Sbjct: 1   NEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSSTTF 59

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 60  PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIA 119

Query: 187 FDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAP 235
                +S+ G   ER RE  +   +               K  +V    +E P  R    
Sbjct: 120 KAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVG 179

Query: 236 LTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
            TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L 
Sbjct: 180 STALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQ 239

Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354
           ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL
Sbjct: 240 ERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAVDPL 297

Query: 355 ASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
            S S +        +  +    +   + R++E +DI  I G     +      V +   I
Sbjct: 298 DSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKI 356

Query: 414 YDFLKQS 420
             FL Q 
Sbjct: 357 ERFLSQP 363


>gi|170293965|gb|ACB13076.1| ATP synthase beta subunit [Mychonastes jurisii]
          Length = 366

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/352 (28%), Positives = 161/352 (45%), Gaps = 18/352 (5%)

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +   + S+ I    P  ++    
Sbjct: 1   RGMEVLDTGNPLSVPVGKATLGRIFNVLGEPVDNMGPVQNQE-SLPIHRTAPAFVDLDTR 59

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 60  LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGER 119

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    L+A+T+AEYF     
Sbjct: 120 TREGNDLYAEMKESGVIVEKNLADSKVALVYGQMNEPPGARMRVALSALTMAEYFRDANK 179

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+
Sbjct: 180 QDVLFFVDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITS 237

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           + +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +       + 
Sbjct: 238 IQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPWILGEK 297

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 298 HYGCAQNVKKTLQRYKELQDIIAILGLDELSEDD-RLVVARARKIERFLSQP 348


>gi|253580458|ref|ZP_04857723.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848188|gb|EES76153.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39BFAA]
          Length = 465

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/406 (26%), Positives = 188/406 (46%), Gaps = 13/406 (3%)

Query: 24  GYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +   V   V        + D +  +      + +V   +  ++V    +   E +
Sbjct: 4   GKIVQVMGPVVDVVFEDGNLPEIKDALEVENNGKRCVMEVSHHLGNNMVRCIMLSASEGL 63

Query: 82  SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V   G   ++       GR+ N LG  +D   SL +G+    I    P   +++ 
Sbjct: 64  QRDREVIATGSGIKVPVGDKTLGRLFNVLGDTVDDGPSL-EGEQKWVIHRDPPDFEHQKP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    ++   +    S+   VGE
Sbjct: 123 AVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   +VLL 
Sbjct: 183 RSREGNDLWSEMKESGVLEKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDEEHRDVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  ++   G++T+V +V V
Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIASTKD--GSVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESTSRILEPDVVGEEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ +++E +DI  I G     +      V +   I  FL Q 
Sbjct: 361 KVQEILQKYKELQDIIAILGMEELSEED-KSTVFRARKIQKFLSQP 405


>gi|225630028|ref|YP_002726819.1| ATP synthase F1, beta subunit [Wolbachia sp. wRi]
 gi|254808174|sp|C0R5I6|ATPB_WOLWR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|225592009|gb|ACN95028.1| ATP synthase F1, beta subunit [Wolbachia sp. wRi]
          Length = 475

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 168/371 (45%), Gaps = 19/371 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  +IV    +   + +S GD     G    +       GR+ N +G+ ID    L    
Sbjct: 48  IGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVPIGRSTLGRIFNVVGELIDECGPLKGKY 107

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    ++  E+   TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 108 NLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELIN 167

Query: 184 SDCFDK---VIISLVGERGREVREFIEDY--------LGDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   +               ++V+V    +E P  R 
Sbjct: 168 NIAKAHKGFSVFAGVGERTREGNDLYHEMITSNVININEHEKSQAVLVYGQMNEPPGARA 227

Query: 233 MAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF  +   +VL  +D+I RF  +  EI+   G +P A GY  ++ +++ 
Sbjct: 228 RVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMG 287

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            + ERI       G+IT+V ++ V  D+  DP   +  S LD   VL+R +AE G YP V
Sbjct: 288 AMQERIA--STTSGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQIAEMGIYPAV 345

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQ 409
           DPL S S+         +  K+ S +  ++  ++  +DI  I G     D   DK +  +
Sbjct: 346 DPLDSTSQSLSAEIIGEEHYKVASEVKRILQTYKSLQDIIAILGMDELSDE--DKIIVDR 403

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 404 ARKIQKFLSQP 414


>gi|149384661|gb|ABR25139.1| ATP synthase beta chain [Lindsaea quadrangularis]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGEVTLGRIFNVLGEPVDNLGPV-ESS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV-----------VVATSDESPILRK 232
           +       +S+ G  G   RE  + Y+     K +            V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINEKNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAISGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 357 RKVERFLSQP 366


>gi|150187290|emb|CAK30218.1| ATP synthase alpha subunit [Streptococcus sobrinus]
          Length = 343

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/347 (27%), Positives = 156/347 (44%), Gaps = 10/347 (2%)

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            +  + V I  +G   EI+ GD V   G+   +       GRV+N LG+P+DG   + K 
Sbjct: 1   NLESNDVGIIILGDFSEITEGDTVKRTGKIMEVPVGPELIGRVVNPLGQPVDGLGDI-KT 59

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--TLLSM 180
           D +  + +  P  M R+ V +  +TG++ ID   P+  GQR  V      GK+   + ++
Sbjct: 60  DKTRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAIDAI 119

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++   VR  +E          ++VV A++ +   L  +AP   V
Sbjct: 120 LNQKDQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLVYIAPYAGV 179

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
            +AE F   G +VL++ D +++ A + RE++      P    YP  VF    RLLER   
Sbjct: 180 AMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLERSAK 239

Query: 300 SEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G+ITA+  +     + +  IA +V SI DG I L  +L   G  P +D  +SV
Sbjct: 240 VSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAGSSV 299

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404
           SR+   A     KK+  +L   +  + E         +   +D    
Sbjct: 300 SRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFGSDLDEATQ 343


>gi|83955127|ref|ZP_00963783.1| Flagellum-specific ATP synthase [Sulfitobacter sp. NAS-14.1]
 gi|83840456|gb|EAP79629.1| Flagellum-specific ATP synthase [Sulfitobacter sp. NAS-14.1]
          Length = 434

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 163/396 (41%), Positives = 238/396 (60%), Gaps = 2/396 (0%)

Query: 33  YYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR 92
             TV+ L     +G             G+V+      + + P G  E +S+G+ V     
Sbjct: 2   TLTVSGLEAMAAIGSQCRVHTPAGHIDGEVVSAQGSDLCVLPFGTWEGVSVGNTVELIEH 61

Query: 93  F-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151
              +SP   W G V++ALG+P+       +        +  P A +R++V +  +T I+ 
Sbjct: 62  DDMVSPDDSWIGTVVDALGRPLTQYTRARRPRRKTRFRANPPGAFDRKKVGEKLETQIKC 121

Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED-YL 210
           IDIFTP+C GQR+GVFAGSG+GKST+++M AR+   D ++I L+GERGREV++FI++   
Sbjct: 122 IDIFTPICRGQRMGVFAGSGVGKSTMMAMLARNTDADVIVIGLIGERGREVQQFIQEDLG 181

Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270
            + + ++VVVV+T DE+P+LRK A LT   IAEYF S G  VLL+LDS+TRFA + REI 
Sbjct: 182 EEGMARAVVVVSTGDEAPLLRKQAALTTTAIAEYFKSTGKQVLLLLDSVTRFAMAQREIG 241

Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330
              GE P  RGYP SVFSELP LLER GP    +G+IT + +VLVDGD+ N+PIAD+VR 
Sbjct: 242 LARGEPPTLRGYPPSVFSELPHLLERAGPGMAAEGDITGLYTVLVDGDDMNEPIADAVRG 301

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390
           I+DGH+VL+R +AE+GR+P +D   S+SR+     S +E ++       + R+ +  D+ 
Sbjct: 302 IVDGHLVLDRRIAEQGRFPAIDLQKSLSRMLPGCHSPEEYEISKVARKALGRYADMEDLI 361

Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            +G Y+ G D   D+A+        FL QS  + + 
Sbjct: 362 RLGAYKAGSDPETDQAITFFRAASPFLSQSRGEKTP 397


>gi|57237114|ref|YP_178126.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni RM1221]
 gi|86149745|ref|ZP_01067975.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86151230|ref|ZP_01069445.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86154037|ref|ZP_01072238.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|88597713|ref|ZP_01100946.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|121613266|ref|YP_999831.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148926907|ref|ZP_01810585.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157414420|ref|YP_001481676.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           81116]
 gi|167004802|ref|ZP_02270560.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|205356482|ref|ZP_03223246.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218561788|ref|YP_002343567.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|81819580|sp|Q5HX59|ATPB_CAMJR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|122953061|sp|Q0PC30|ATPB_CAMJE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358271|sp|A8FJR2|ATPB_CAMJ8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|190358273|sp|A1VXJ0|ATPB_CAMJJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|57165918|gb|AAW34697.1| ATP synthase F1, beta subunit [Campylobacter jejuni RM1221]
 gi|85840013|gb|EAQ57272.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841577|gb|EAQ58824.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85842451|gb|EAQ59665.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87248948|gb|EAQ71910.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|88190017|gb|EAQ93993.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359494|emb|CAL34278.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|145844484|gb|EDK21592.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385384|gb|ABV51699.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|205345669|gb|EDZ32308.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|284925400|gb|ADC27752.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|307747064|gb|ADN90334.1| ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni M1]
 gi|315057547|gb|ADT71876.1| ATP synthase beta chain [Campylobacter jejuni subsp. jejuni S3]
 gi|315926955|gb|EFV06317.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315931501|gb|EFV10468.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni
           327]
          Length = 465

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N  G  ID  + +   D    I    P   +
Sbjct: 63  DGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISF-DKKWAIHRDPPAFED 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLVVERARKIEKFLSQP 407


>gi|2662066|dbj|BAA23688.1| proton-translocating ATPase, beta subunit [Ruminococcus albus]
          Length = 479

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G    I      V    +++  L + +      +  + +V   I  D+V    +   + +
Sbjct: 7   GKFVQIVGAVVDVRFDKEHMPNLLNALEIDNNGTKLVVEVAQHIGDDVVRCIAMSSTDGL 66

Query: 82  SLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G D V       +        R+ N LG P+D   +    +   EI  + P    +  
Sbjct: 67  VRGVDAVDTGRAISVPVGRETLSRMFNLLGDPVDNLPAPETAE-RWEIHREPPSYEEQTA 125

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
             +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +       IS+   VGE
Sbjct: 126 ANEILETGIKVIDLIAPYLKGGKIGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGE 185

Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLI 255
           R RE  +   +      + K+V+V    +E P  R    L+ +T+AEYF      +VLL 
Sbjct: 186 RTREGNDLYWEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLF 245

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V +V V
Sbjct: 246 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYV 303

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD   VL+RS+A  G +P VDPL S SR+        +  ++  
Sbjct: 304 PADDLTDPAPATTFAHLDATTVLSRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVAR 363

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++ R+ E +DI  I G     D      V +   I  FL Q 
Sbjct: 364 QVQSILQRYVELQDIIAIMGMDELSDED-KLTVSRARKIQRFLSQP 408


>gi|20467399|gb|AAL27830.1| ATPase beta subunit [Larix kaempferi]
          Length = 425

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/381 (26%), Positives = 170/381 (44%), Gaps = 19/381 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           GK      +V ++  +  V    +   + ++ G  V   G    +       GR+ N LG
Sbjct: 16  GKEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTGAPLSVPVGGATLGRIFNVLG 75

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    ++  I    P  +        F+TGI+V+D+  P   G +IG+F G+
Sbjct: 76  EPVDNLGPVD-ARITSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 134

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 135 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQSISESKVAL 194

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 195 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 254

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  +  D   V 
Sbjct: 255 AVGYQPTLATEMGFLQERI--TSTKRGSITSIQAVYVPADDLTDPAPATTFAHSDATTVP 312

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I G   
Sbjct: 313 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYEIAQGVKQTLQRYKELQDIIAIPGLDE 372

Query: 398 GVDLILDKAVHQVPIIYDFLK 418
             +      V +   I  FL 
Sbjct: 373 LSEED-RLIVARARKIERFLS 392


>gi|179184222|gb|ACB78140.1| ATPase [Aliivibrio finisterrensis]
          Length = 393

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 90/393 (22%), Positives = 167/393 (42%), Gaps = 23/393 (5%)

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117
               + +  D V    +G   ++  G  V   GR   +       GRV+N LG+PIDG  
Sbjct: 1   YALALNLERDSVGAVVMGPYADLQEGMKVTGTGRILEVPVGPEMLGRVVNTLGEPIDGKG 60

Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177
            +    L+  +    P  ++R+ V++  +TG + +D   P+  GQR  +      GK+ +
Sbjct: 61  PID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTAM 119

Query: 178 L--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMA 234
              ++  + +     I   +G++   +   +           ++VVVA++ ES  L+ +A
Sbjct: 120 AIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLA 179

Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294
           P +   + EYF  +G++ L++ D +++ A + R+I+      P    +P  VF    RLL
Sbjct: 180 PYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAFPGDVFYLHSRLL 239

Query: 295 ERIGPSEK-------------EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341
           ER     +             + G++TA+  +     + +  +  +V SI DG I L   
Sbjct: 240 ERAARVSEAYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTE 299

Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           L   G  P VDP  SVSR+   A +   KKL   +   + ++ E   +     +   +D 
Sbjct: 300 LFTAGVRPAVDPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRE---LAAFAQFSSDLDD 356

Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434
              K +     + + +KQ     +   VF +  
Sbjct: 357 ATKKQLDHGEKVTELMKQKQ--YAPMSVFDQAL 387


>gi|190358736|sp|Q04G20|ATPB_OENOB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 466

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 10/365 (2%)

Query: 63  IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK 121
           I +   +V    +   + ++ G  V   G    +       GRV N LG+P+DG D +  
Sbjct: 47  IDLGDSVVRTIAMDSTDGLTRGMKVLDTGAPIEVPVGEATLGRVFNVLGEPVDGGDPIPN 106

Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181
                 I    P         +  +TGI+VID+  P   G + G+F G+G+GK+ L+   
Sbjct: 107 SVDRHPIHRSAPKYDELATSTEVLETGIKVIDLLEPYLRGGKTGLFGGAGVGKTVLIQEL 166

Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLT 237
             +       IS+   VGER RE  +   +     + K + +V    +E P  R    LT
Sbjct: 167 IHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLKNTAMVYGQMNEPPGARMRVGLT 226

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
            +T+AE F  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ER
Sbjct: 227 GLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQER 286

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL ++G YP VDPL S
Sbjct: 287 I--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSLTQQGIYPAVDPLES 344

Query: 357 V-SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
             S L       D  ++ + + H + R++E +DI  I G     D      V++   I  
Sbjct: 345 TSSALTPDIVGEDHYEVATQVQHFLQRYKELQDIISILGMDELSDEE-KTIVNRARRIQF 403

Query: 416 FLKQS 420
           FL Q 
Sbjct: 404 FLSQP 408


>gi|190574236|ref|YP_001972081.1| putative flagellum-specific ATP synthase [Stenotrophomonas
           maltophilia K279a]
 gi|190012158|emb|CAQ45781.1| putative flagellum-specific ATP synthase [Stenotrophomonas
           maltophilia K279a]
          Length = 461

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 142/411 (34%), Positives = 224/411 (54%), Gaps = 4/411 (0%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF 88
            +V  T+  +     LG     +  +   +  +V+    +  Y+ P      +     V 
Sbjct: 47  RAVGLTLEAVGCEAPLGASCKVEVVDGGWVDAEVVGFAGERTYLMPSAELHGLLPNARVV 106

Query: 89  HW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
               R  +       GRVI++ G P+DG   + + +  + +       + R+ + +    
Sbjct: 107 PSARRGGVEVGEGLLGRVIDSDGVPLDGKGPI-RAEGHVGMAGVSINPLAREPITQPLDV 165

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI- 206
           G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+ 
Sbjct: 166 GVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVE 225

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                + L+++VVV + +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + 
Sbjct: 226 TTLGEEGLRRAVVVASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQ 285

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD
Sbjct: 286 REIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIAD 345

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGHI+L+R +A+ G YP +D  +SVSR+  +      +  +  L  L+  +   
Sbjct: 346 AARAILDGHILLSRRVADSGLYPAIDVESSVSRVVTEIADEPWRLRIRKLKRLVSAYSAN 405

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           RD+  IG Y+ G D   D+A+ + P I +FL Q  +  +     Q   ++L
Sbjct: 406 RDLIAIGAYQRGNDAATDEALERWPEIMEFLGQDVAKAADLPHSQAALQRL 456


>gi|189017662|gb|ACD71500.1| F1-ATPase alpha subunit [Afrothismia korupensis]
          Length = 357

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 83/360 (23%), Positives = 143/360 (39%), Gaps = 23/360 (6%)

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122
            +  + V I   G    I  GD V   G     P      GRV++ALG PIDG  +L   
Sbjct: 1   NLENENVGIVVFGSDTAIKDGDPVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALASD 60

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182
                +  K P  + RQ V +  +TG++ +D   P+  GQR  +      GK+ +     
Sbjct: 61  HERRRVEVKAPGIIERQSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTI 120

Query: 183 RSDCF----------------DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSD 225
            +                      +   +G++   V + ++     N  + S++V AT+ 
Sbjct: 121 LNQNIPRAHPEAQLGTSETSPVYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATAS 180

Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285
           +   L  +AP +   + EYF     + L+I D +++ A + R+++      P    +P  
Sbjct: 181 DPAPLLFLAPYSGCAMGEYFRDNRMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD 240

Query: 286 VFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343
           VF    RLLER      +   G+ TA+  +     + +  I  +V  I DG I     L 
Sbjct: 241 VFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELF 300

Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
             G  P ++   SVSR+   A S   K++  S    + ++ E   +     +   +D   
Sbjct: 301 YRGLRPAINVGLSVSRVGSAAQSRAMKQVCGSSKLELAQYRE---VAAFAQFGSDLDAAT 357


>gi|149384687|gb|ABR25152.1| ATP synthase beta chain [Campyloneurum latum]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 60  ATSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|4519306|dbj|BAA75568.1| ATP synthase beta-subunit [Basichlamys sacculifera]
          Length = 376

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+PID   ++   D ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKITLGRIFNVLGEPIDNMGTVFVED-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P   +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFADLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFVDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       ++   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQTVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|150187250|emb|CAK30206.1| ATP synthase alpha subunit [Streptococcus iniae]
 gi|154424949|emb|CAL18577.1| ATP synthase alpha subunit [Streptococcus iniae]
          Length = 367

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 154/367 (41%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
           V  G+ +          G    +    V I  +G    I  GD+V   G+   +      
Sbjct: 8   VMSGELLEFSNG---AYGMAQNLESTDVGIIILGDFSTIREGDVVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIKTSGFR-PVEAPAPGVMQRKSVFEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLFIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNAGIKPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|133917176|emb|CAJ33229.1| ATP synthase alpha subunit [Lactobacillus iners DSM 13335]
          Length = 355

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/336 (28%), Positives = 148/336 (44%), Gaps = 7/336 (2%)

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGD 116
           + G    +  + V I  +G  ++I  GD V   G+   +       GRV+N LG+P+DG 
Sbjct: 20  SYGIAQNLEANDVGIIILGKFDDIREGDQVKRTGKIMEVPVGEALIGRVVNPLGQPVDGL 79

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             + K   +  I SK P  M RQ V +  +TGI+ ID   P+  GQR  +      GK+ 
Sbjct: 80  GEI-KTTKTRPIESKAPGVMERQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTGKTA 138

Query: 177 LLSMFARSDCFDKVI--ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233
           L      +     VI     +G++   V+  ++       +  ++VV A   E   +  +
Sbjct: 139 LAIDTIINQKGQNVICIYVAIGQKESTVKNSVQTLKRFGAMDYTIVVQAGPSEPAPMLYI 198

Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           AP     + E F   G +VL++ D +++ A S REI+      P    YP  VF    RL
Sbjct: 199 APYAGTAMGEEFMYNGKDVLIVFDDLSKQAVSYREISLLLRRPPGREAYPGDVFYLHSRL 258

Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
           LER     K+   G++TA+  +     + +  I  +V SI DG I L   L   G  P V
Sbjct: 259 LERSAKLSKKLGGGSMTALPFIQTQAGDISAYIPTNVISITDGQIFLESDLFFAGTRPAV 318

Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
           +   SVSR+   A     KK+  +L   +  + E  
Sbjct: 319 NAGESVSRVGGSAQIKAMKKVAGTLRVDLASYRELE 354


>gi|71370818|gb|AAZ30638.1| ATP synthase beta subunit [Amphiporus angulatus]
          Length = 427

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/386 (27%), Positives = 180/386 (46%), Gaps = 18/386 (4%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
           +  +G+    + +V   +  + V    +   E +  G +    G   RI       GR+I
Sbjct: 9   LEVEGRKPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQVCKDTGHPIRIPVGPETLGRII 68

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+PID    +   D    I ++ P  +     ++   TGI+V+D+  P   G +IG+
Sbjct: 69  NVIGEPIDERGPV-PTDKRASIPAEAPEFVEMSVQQEILATGIKVVDLLAPYAKGGKIGL 127

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKK 216
           F G+G+GK+ L+     +         + + VGER RE  +   + +        D+  K
Sbjct: 128 FGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDSSSK 187

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G 
Sbjct: 188 VSLVYGQMNEPPGARARVALTGLTVAEYFRDQKGQDVLLFIDNIFRFTQAGSEVSALLGR 247

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 248 IPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 305

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +AE G YP VDPL S SR+ D     DE   +   +  ++  +   +DI  I G
Sbjct: 306 TVLSRGIAELGIYPAVDPLDSTSRILDPHIVGDEHYGIARGVQKILQDYRSLQDIIAILG 365

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420
                +      V +   I  FL Q 
Sbjct: 366 MDELSEED-KLTVSRARKIQRFLSQP 390


>gi|81428735|ref|YP_395735.1| F0F1 ATP synthase subunit beta [Lactobacillus sakei subsp. sakei
           23K]
 gi|78610377|emb|CAI55427.1| H(+)-transporting two-sector ATPase (ATP synthase), beta subunit
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 483

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 114/418 (27%), Positives = 191/418 (45%), Gaps = 16/418 (3%)

Query: 15  YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSDNLGQV-IRINLDI 69
             +   +  G +  +      V   S    L D      V +G +   + +V + +   +
Sbjct: 2   REEETTMSMGKVVQVIGPVVDVE-FSLDTDLPDINNALTVDKGNDETVVLEVALELGDGV 60

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           +    +   + +  G  V   GR   +       GRV N LG+ IDG +          I
Sbjct: 61  MRTISMESTDGLRRGMPVEDAGRAINVPVGKETLGRVFNVLGETIDGGEEFPADFRRDSI 120

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P         +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +
Sbjct: 121 HRSAPKFEELNTSSEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAEE 180

Query: 189 KVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              IS+   VGER RE  +   +     + +K+ +V    +ESP  R    LT +TIAEY
Sbjct: 181 HGGISVFTGVGERTREGNDLYFEMKESGVLEKTAMVFGQMNESPGARMRVALTGLTIAEY 240

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +
Sbjct: 241 FRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTK 298

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG++T++ ++ V  D++ DP   +  + LD    L+R L ++G YP V+PL S S   D 
Sbjct: 299 KGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLDRKLTQQGIYPAVNPLESSSSALDP 358

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  ++ S + H++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 359 EIVGQEHYEVASEVQHVLQRYRELQDIISILGMDELSDDE-KIIVARARRIQFFLSQN 415


>gi|57504649|ref|ZP_00370727.1| ATP synthase F1, beta subunit [Campylobacter coli RM2228]
 gi|57019418|gb|EAL56113.1| ATP synthase F1, beta subunit [Campylobacter coli RM2228]
          Length = 465

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 113/409 (27%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKQKLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N  G  ID  + +   D    I    P   +
Sbjct: 63  DGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISF-DKKWAIHRDPPAFED 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNRS+AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLIVERARKIEKFLSQP 407


>gi|179184046|gb|ACB78134.1| ATPase [Vibrio gigantis]
          Length = 400

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 95/399 (23%), Positives = 169/399 (42%), Gaps = 25/399 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L+  V  G+ +   G         + +N D V    +G   ++  G  V   GR   +
Sbjct: 1   HGLAD-VMQGEMIELPGG---RYALALNLNRDSVGAVVMGPYADLQEGMKVTGTGRILEV 56

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   + +  L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 57  PVGPEMLGRVVNTLGEPIDGKGPI-EAKLTSPVEIIAPGVIDRKSVDQPVQTGYKSVDSM 115

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  V      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 116 IPIGRGQRELVIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEEHG 175

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               +VVVVA++ ES  L+ +AP     + EYF  +G++ L++ D +++ A + R+I+  
Sbjct: 176 ALANTVVVVASASESAALQYLAPYGGCAMGEYFRDRGEDALIVYDDLSKXAVAYRQISLL 235

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +               G++TA+  +     +
Sbjct: 236 LKRPPGREAFPGDVFYLHSRLLERAARVSEVYVEKFTNGEVTGKTGSLTALPIIETQAGD 295

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 296 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 355

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           + ++ E   +     +   +D    K +     + + +K
Sbjct: 356 LAQYRE---LAAFAQFSSDLDEATKKQLDHGQKVTELMK 391


>gi|21667284|gb|AAM74009.1| ATP synthase beta chain [Adenophorus periens]
 gi|21667302|gb|AAM74018.1| ATP synthase beta chain [Adenophorus tripinnatifidus]
          Length = 422

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAIDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|149384669|gb|ABR25143.1| ATP synthase beta chain [Lomariopsis sorbifolia]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGATDTGAPLSVPVGEITLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           ++  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    
Sbjct: 60  VTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLITELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIDEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +   ++   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQAVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|20467373|gb|AAL27817.1| ATPase beta subunit [Ephedra intermedia]
          Length = 435

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 22  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 81

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 82  EPVDNLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 140

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 141 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVAL 200

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 201 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 260

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 261 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 318

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 319 SRGLAAKGIYPAVDPLDSTSTMLQPRXXGEXHYEIAQEVKQTLQRYKELQDIIAILGLDE 378

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +        +   I  FL Q 
Sbjct: 379 LSEED-RXXXXRARKIERFLSQP 400


>gi|115465323|ref|NP_001056261.1| Os05g0553000 [Oryza sativa Japonica Group]
 gi|84028177|sp|Q01859|ATPBM_ORYSJ RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|49328022|gb|AAT58723.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
 gi|50878425|gb|AAT85199.1| putative ATP synthase beta chain [Oryza sativa Japonica Group]
 gi|113579812|dbj|BAF18175.1| Os05g0553000 [Oryza sativa Japonica Group]
 gi|215692634|dbj|BAG88054.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 552

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + H  +    + Q +    ++V    +   E 
Sbjct: 82  GQVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLG--ENMVRTIAMDGTEG 139

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR++N +G+PID    +      + I  + P  + + 
Sbjct: 140 LVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHF-LPIHREAPAFVEQA 198

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 199 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 258

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 259 ERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 318

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 319 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 376

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 377 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVL 436

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 437 GEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 490


>gi|119350515|gb|ABL63208.1| AtpB [Myrmecia israelensis]
          Length = 393

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   D    I
Sbjct: 5   VRAVSMSATDGLMRGMEVIDTGKPLTVPVGQVTLGRIFNVLGEPVDNLGPVDNKDG-FPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVIDEQNISNSKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   +HR++E +DI  I G     +    + V +   I  
Sbjct: 302 TSTMLQPWIVGEEHYECAQNVKSTLHRYKELQDIIAILGLDELSEED-RQIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|292489159|ref|YP_003532046.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
 gi|292900277|ref|YP_003539646.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291200125|emb|CBJ47251.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946]
 gi|291554593|emb|CBA22232.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430]
          Length = 454

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 236/428 (55%), Gaps = 15/428 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVG 76
            + G ++  T +      L   + +G   V + +  + +     +V+     ++Y+ P+ 
Sbjct: 26  RRYGRLTRATGLVMEAVGL--KLPIGAICVVERQTRNGIMPVECEVVGFKDQLLYLMPLE 83

Query: 77  IGEEISLGDLVFH------WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
             + +  G  V+        G+ ++       GRV++A G+P+DG  +  K   S  + +
Sbjct: 84  HVDGVLPGTRVYAPDGDSYEGK-QLPVGPQLLGRVLDAQGRPLDGRPAPLKTS-SASLFT 141

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           +    ++R  ++     G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D +
Sbjct: 142 QPINPLHRDPIKSVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTDADVI 201

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           ++ L+GERGREV++FIE+ LG + ++++VV+ A +D SP+LR    + A  +AE F  +G
Sbjct: 202 VVGLIGERGREVKDFIENILGAEGIERAVVIAAPADVSPVLRMQGAVYATRLAEDFRDRG 261

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            NVLLI+DS+TRFA + RE+A   GE P  +GYP SVF+ LP L+ER G      G++TA
Sbjct: 262 MNVLLIMDSLTRFAMAQREVALAIGEPPATKGYPPSVFARLPALVERAGNGVAGGGSVTA 321

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
             +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR   +     +
Sbjct: 322 FYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISRAMTELIPHAQ 381

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            + V S    +  ++   D+  +G Y  G D +LD+A+ + P +  +L Q+  +      
Sbjct: 382 YRNVQSFKQQLSSYQRNSDLVSVGAYVSGSDALLDRAIARYPQMESYLHQAVHESCGYAE 441

Query: 430 FQEITKKL 437
                  L
Sbjct: 442 AVSALSAL 449


>gi|42558364|gb|AAS19891.1| ATP synthase beta chain [Lellingeria hirsuta]
          Length = 422

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      + LL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDALLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|21633459|gb|AAM52204.1| ATP synthase beta subunit [Humbertia madagascariensis]
          Length = 483

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 178/418 (42%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G +  I      V     +   + + +V QG++S     +   +V ++  +  V    + 
Sbjct: 6   GRVVQIIGPVIDVPFPPGKMPNIYNALVVQGRDSVXEQMNVTCEVQQLLGNNRVRAVAMS 65

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
               +  G  V   G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 66  DTNGLLRGMEVIDTGAPISVPVGGSTLGRIFNVLGEPVDNLGPVD-TRTTSPIHRSAPAF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F TGI+V+D+ +P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 125 IQLDTKLSIFDTGIKVVDLVSPYRRGGKIGLFGGAGVGKTELIMELINNIAKAHGGVSVF 184

Query: 196 GERGREVRE---FIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G  G    E      +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 185 GGVGERTLEGIDLYMEVKESGVINEENITESKVALVYGQMNEPPGARMRVGLTALTMAEY 244

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 245 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTK 302

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 303 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 362

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +D   I G     +      V +   I  FL Q 
Sbjct: 363 RIVGEEHYETAQRVKQTLQRYKELQDTIAILGLDELSEED-RLTVARARKIERFLSQP 419


>gi|19033089|gb|AAL83529.1|AF408801_1 ATP synthase beta subunit [Klebsormidium flaccidum]
          Length = 402

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG P+D    +    
Sbjct: 2   LGDNKVRAISMSATDGLMRGMKVTDTGAALSVPVGEATLGRIFNVLGGPVDNLGPVN-HT 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  KTFPIHRPAPAFTQLDTKLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQDISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A G   ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGSQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 GLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  ++   +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYEIAQGVKETLQRYKELQDIIAILGLDELSEED-RLTVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|69247775|ref|ZP_00604480.1| ATP synthase F1, beta subunit [Enterococcus faecium DO]
 gi|227552045|ref|ZP_03982094.1| ATP synthase subunit beta [Enterococcus faecium TX1330]
 gi|257879714|ref|ZP_05659367.1| ATP synthase F1 [Enterococcus faecium 1,230,933]
 gi|257882707|ref|ZP_05662360.1| ATP synthase F1 [Enterococcus faecium 1,231,502]
 gi|257884021|ref|ZP_05663674.1| ATP synthase F1 [Enterococcus faecium 1,231,501]
 gi|257886793|ref|ZP_05666446.1| ATP synthase F1 [Enterococcus faecium 1,141,733]
 gi|257890378|ref|ZP_05670031.1| ATP synthase F1 [Enterococcus faecium 1,231,410]
 gi|257892986|ref|ZP_05672639.1| ATP synthase F1 [Enterococcus faecium 1,231,408]
 gi|257895361|ref|ZP_05675014.1| ATP synthase F1 [Enterococcus faecium Com12]
 gi|257897973|ref|ZP_05677626.1| ATP synthase F1 [Enterococcus faecium Com15]
 gi|258616675|ref|ZP_05714445.1| F0F1 ATP synthase subunit beta [Enterococcus faecium DO]
 gi|260559627|ref|ZP_05831807.1| ATP synthase F1 [Enterococcus faecium C68]
 gi|261208692|ref|ZP_05923129.1| ATP synthase F1 [Enterococcus faecium TC 6]
 gi|289566051|ref|ZP_06446488.1| ATP synthase F1, beta subunit [Enterococcus faecium D344SRF]
 gi|293378232|ref|ZP_06624401.1| ATP synthase F1, beta subunit [Enterococcus faecium PC4.1]
 gi|293556416|ref|ZP_06674997.1| ATP synthase F1, beta subunit [Enterococcus faecium E1039]
 gi|293560028|ref|ZP_06676532.1| ATP synthase F1, beta subunit [Enterococcus faecium E1162]
 gi|293568724|ref|ZP_06680039.1| ATP synthase F1, beta subunit [Enterococcus faecium E1071]
 gi|293572425|ref|ZP_06683405.1| ATP synthase F1, beta subunit [Enterococcus faecium E980]
 gi|294616249|ref|ZP_06696042.1| ATP synthase F1, beta subunit [Enterococcus faecium E1636]
 gi|294617581|ref|ZP_06697211.1| ATP synthase F1, beta subunit [Enterococcus faecium E1679]
 gi|294623204|ref|ZP_06702082.1| ATP synthase F1, beta subunit [Enterococcus faecium U0317]
 gi|314939612|ref|ZP_07846839.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a04]
 gi|314941238|ref|ZP_07848134.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133C]
 gi|314949829|ref|ZP_07853139.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0082]
 gi|314953379|ref|ZP_07856304.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133A]
 gi|314993456|ref|ZP_07858821.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133B]
 gi|314997321|ref|ZP_07862286.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a01]
 gi|68194704|gb|EAN09186.1| ATP synthase F1, beta subunit [Enterococcus faecium DO]
 gi|227178798|gb|EEI59770.1| ATP synthase subunit beta [Enterococcus faecium TX1330]
 gi|257813942|gb|EEV42700.1| ATP synthase F1 [Enterococcus faecium 1,230,933]
 gi|257818365|gb|EEV45693.1| ATP synthase F1 [Enterococcus faecium 1,231,502]
 gi|257819859|gb|EEV47007.1| ATP synthase F1 [Enterococcus faecium 1,231,501]
 gi|257822847|gb|EEV49779.1| ATP synthase F1 [Enterococcus faecium 1,141,733]
 gi|257826738|gb|EEV53364.1| ATP synthase F1 [Enterococcus faecium 1,231,410]
 gi|257829365|gb|EEV55972.1| ATP synthase F1 [Enterococcus faecium 1,231,408]
 gi|257831926|gb|EEV58347.1| ATP synthase F1 [Enterococcus faecium Com12]
 gi|257835885|gb|EEV60959.1| ATP synthase F1 [Enterococcus faecium Com15]
 gi|260074295|gb|EEW62617.1| ATP synthase F1 [Enterococcus faecium C68]
 gi|260077194|gb|EEW64914.1| ATP synthase F1 [Enterococcus faecium TC 6]
 gi|289162158|gb|EFD10021.1| ATP synthase F1, beta subunit [Enterococcus faecium D344SRF]
 gi|291588684|gb|EFF20517.1| ATP synthase F1, beta subunit [Enterococcus faecium E1071]
 gi|291590763|gb|EFF22479.1| ATP synthase F1, beta subunit [Enterococcus faecium E1636]
 gi|291596187|gb|EFF27450.1| ATP synthase F1, beta subunit [Enterococcus faecium E1679]
 gi|291597399|gb|EFF28572.1| ATP synthase F1, beta subunit [Enterococcus faecium U0317]
 gi|291601483|gb|EFF31754.1| ATP synthase F1, beta subunit [Enterococcus faecium E1039]
 gi|291605895|gb|EFF35325.1| ATP synthase F1, beta subunit [Enterococcus faecium E1162]
 gi|291607487|gb|EFF36829.1| ATP synthase F1, beta subunit [Enterococcus faecium E980]
 gi|292643096|gb|EFF61237.1| ATP synthase F1, beta subunit [Enterococcus faecium PC4.1]
 gi|313588612|gb|EFR67457.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a01]
 gi|313592121|gb|EFR70966.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133B]
 gi|313594572|gb|EFR73417.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133A]
 gi|313599962|gb|EFR78805.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133C]
 gi|313641152|gb|EFS05732.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a04]
 gi|313643902|gb|EFS08482.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0082]
          Length = 468

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 117/414 (28%), Positives = 191/414 (46%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSD---NLGQVIRINLDIVYIC 73
           +  G I  +      V   S    L D     VV++   +     L   + +   ++   
Sbjct: 1   MSSGKIVQVIGPVVDVE-FSLDQSLPDINNALVVYKNDENKSKVVLEAALELGDGVIRTI 59

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G+   +       GRV N LG  ID +    +     EI  K 
Sbjct: 60  AMESTDGLQRGMEVIDTGKAISVPVGKETLGRVFNVLGDTIDLETPFPEDAERSEIHKKA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   I
Sbjct: 120 PAFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGI 179

Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           S+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF   
Sbjct: 180 SVFTGVGERTREGNDLYYEMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDV 239

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+I
Sbjct: 240 EGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSI 297

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA-SVSRLADKAWS 366
           T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA S S LA +   
Sbjct: 298 TSIQAIYVPADDYTDPAPATAFAHLDATTNLERKLTEQGIYPAVDPLASSSSALAPEIVG 357

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  K+ + + H++ R+ E +DI  I G     D      V +   +  FL Q+
Sbjct: 358 EEHYKVATEVQHVLQRYRELQDIIAILGMDELSDQE-KVLVSRARRVQFFLSQN 410


>gi|149384729|gb|ABR25173.1| ATP synthase beta chain [Pyrrosia serpens]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 60  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIDEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149798655|gb|ABR32018.1| ATP synthase beta chain [Anetium citrifolium]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVSMSATDGLMRGMAAVDTGAPLNVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  ++    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVTNEQNISESKVALIYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSSKGDNVLL-ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF       +L  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDINKRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 ALQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|65332606|gb|AAY42227.1| ATP synthase beta subunit [Anisophyllea myriosticta]
          Length = 479

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 3   GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 60

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +++G  V   G    +       GR+ N LG+PID    +     +  I    P
Sbjct: 61  MSATDGLTIGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIHRSAP 119

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G ++G+F G+G GK+ L+     +       +S
Sbjct: 120 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKVGLFGGAGGGKTVLIMELINNIAKAHGGVS 179

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 180 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 239

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 240 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 298 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 357

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                 +E       +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 QPRIVGEEHYGTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 416


>gi|307293807|ref|ZP_07573651.1| ATPase, FliI/YscN family [Sphingobium chlorophenolicum L-1]
 gi|306879958|gb|EFN11175.1| ATPase, FliI/YscN family [Sphingobium chlorophenolicum L-1]
          Length = 442

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 139/410 (33%), Positives = 215/410 (52%), Gaps = 3/410 (0%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
              G + S  +    VT   + +  G  ++     +    +V+        + P+     
Sbjct: 24  RHVGRLVSHDAGMLEVTGFRRPIGAGARLIA-SDGTICRAEVVGFRGGRTLLVPLDADAP 82

Query: 81  ISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V        +       GRVI+A+G+P+D    +  G  S  +       ++R 
Sbjct: 83  LENGARVEPDSQATMVQVGDGLIGRVIDAMGQPLDRKGPIIAG-GSWPLNGVKGNVLDRG 141

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
           RV + F  G+R ++       GQRI + AGSG+GKS L+    +    D V+  L+GERG
Sbjct: 142 RVTEPFDLGVRAVNALLTAGRGQRIAIIAGSGVGKSVLMGQMIQGAEADIVVAGLIGERG 201

Query: 200 REVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259
           REV +F+E  L   + KS+VV   +D  P+LR  A   A  IAEYF ++G  VLL++DS+
Sbjct: 202 REVSDFLETKLKGAMHKSIVVAVPADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSL 261

Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319
           TR AH+ REI    GE P  +GYP S  + +PRL+ER G   +  G+ITA+ +VL DGD+
Sbjct: 262 TRCAHAQREIGLALGEPPAMKGYPPSALALIPRLVERAGVDTRSGGSITALYTVLADGDD 321

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +DPI D+ R+I+DGH VL+R L+E+  +P +D   S+SR+       + +   ++   L
Sbjct: 322 TDDPIVDAARAIVDGHFVLSRHLSEQAIFPAIDVGKSLSRVMADVVPDEHRMAAAAYRRL 381

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
              +EE RD+ L+G YRPG D ++D+AV +   I DF++Q        D 
Sbjct: 382 WAAYEENRDLILMGAYRPGNDPVIDEAVQRRQEILDFIRQDQKSFIDLDT 431


>gi|292559444|ref|YP_003540812.1| ATP synthase F1 subunit alpha [Hartmannella vermiformis]
 gi|290775697|gb|ADD62196.1| ATP synthase F1 subunit alpha [Hartmannella vermiformis]
          Length = 535

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/415 (24%), Positives = 179/415 (43%), Gaps = 16/415 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G + ++      +  L + V   + +  +   S      + +  D V    +G    +
Sbjct: 38  ESGRVVTVGDGIAKIYGL-KNVTASEMLEFE---SGVRALALNLEYDSVRAILLGDERLV 93

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
            +GD V+   +   +       GRV+NAL +P D    L   D  + I    P  ++R+R
Sbjct: 94  KVGDKVWRTKKIVSVKVGDKLVGRVLNALIEPADEKGVLEFVDERL-INVAAPDVISRER 152

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF----DKVIISLVG 196
           V +  +TG++V+D   P+  GQR  +      GK+ +      +          I   +G
Sbjct: 153 VAQPLETGLKVVDALVPIGRGQRELIIGDRQTGKTAIALDAIINQQDARDPVICIYVAIG 212

Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255
           +R  E+R   +     N    +V+V AT+ E   L  +AP +  T+ EYF  +G + L+I
Sbjct: 213 KRNSEIRRIEKVLEAKNCMSYTVIVKATAGEPAPLLYLAPYSGTTVGEYFRDRGQHSLII 272

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISV 313
            D +++ A + R+++      P    YP  VF    RLLER          G++T++  +
Sbjct: 273 YDDLSKHAVAYRQMSLLLRRPPAREAYPADVFYLHSRLLERSAKLASTLGGGSLTSLPII 332

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
                + +  I  +V SI DG I L RSL +EG  P V P  SVSR+   A +   K++ 
Sbjct: 333 ETVQGDISAYIPTNVISITDGQIYLERSLFKEGIRPAVSPGLSVSRVGSAAQNKVMKRVA 392

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
            SL   + +F E         +   +D    + +++  I+ + L Q      + D
Sbjct: 393 GSLKLELAQFREVE---QFARFASDIDETTKRQIYRGTILTELLTQPKYSPITVD 444


>gi|56965609|ref|YP_177343.1| F0F1 ATP synthase subunit beta [Bacillus clausii KSM-K16]
 gi|81821961|sp|Q5WB78|ATPB_BACSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|56911855|dbj|BAD66382.1| F0F1-type ATP synthase beta chain [Bacillus clausii KSM-K16]
          Length = 470

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 185/416 (44%), Gaps = 19/416 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV---------IRINLDIVY 71
           +  G I  IT     V   S  +   +  +   +     G V         + +  D V 
Sbjct: 1   MSTGRIIQITGPVVDVKFPSGQLPEINNALTVNQQGAADGAVDVKVTLEVALHLGNDTVR 60

Query: 72  ICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +G  + +  G  V   G    +       GRV N LG+ ID  + + +G     I  
Sbjct: 61  TVAMGSTDGLMRGTEVLDTGGPISVPVGEATLGRVFNVLGEEIDLQEPVAEGTRRDPIHR 120

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +  
Sbjct: 121 EAPSFEELTTTTEILETGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIQELINNVALEHG 180

Query: 191 ---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF 
Sbjct: 181 GISVFAGVGERTREGNDLYHEMKDAGVITKTAMVFGQMNEPPGARMRVALTGLTMAEYFR 240

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG
Sbjct: 241 DEQGADVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKG 298

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           ++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLAS SR      
Sbjct: 299 SVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLASTSRALSPEI 358

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   +   + ++ E +DI  I G     +      V +   I  FL Q+
Sbjct: 359 VGEEHYNVARGVQQTLQKYRELQDIIAILGMEELSEED-KLIVARARRIQFFLSQN 413


>gi|302747482|gb|ADL63222.1| Atp1 [Helianthemum grandiflorum]
          Length = 349

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGIPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 349


>gi|241761493|ref|ZP_04759581.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374400|gb|EER63897.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 484

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 191/417 (45%), Gaps = 24/417 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G IS +      V    +   L   +  + +++  + +V   +  ++V    +   + + 
Sbjct: 11  GRISQVIGPVVDVLFEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLV 70

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G   R+       GR++N +G+P+D    +G    +M I +  PP   +   
Sbjct: 71  RGQEVVDTGSEIRVPVGPETLGRIMNVVGRPVDERGPIG-SKQTMPIHADAPPFTEQSTD 129

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
                TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGER
Sbjct: 130 TAILTTGIKVIDLLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGER 189

Query: 199 GREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
            RE  +   ++L   +              K  +V    +E P  R    L+ +T+AEYF
Sbjct: 190 TREGNDLYHEFLEAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYF 249

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
             +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +  +K
Sbjct: 250 RDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKK 307

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADK 363
           G+IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VDPL S SR L  +
Sbjct: 308 GSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPR 367

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +  +    +  ++  ++  +DI  I G     +    K V +   I  FL Q 
Sbjct: 368 IVGDEHYQTARDVQEILQHYKNLQDIIAILGMDELSEDD-RKVVGRARRIQRFLSQP 423


>gi|19033079|gb|AAL83524.1|AF408796_1 ATP synthase beta subunit [Gonatozygon monotaenium]
          Length = 402

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +     +   G    +       GR+ N LG+P+D    +    
Sbjct: 2   LGDNKVRAVAMSATDGLMRNMEIIDTGAPLSVPVGEVTLGRIFNVLGEPVDELGPVNITT 61

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 62  TS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 241 TLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGAEHYETAQGVKKTLQRYKELQDIIAILGLDELSEED-RLIVARA 357

Query: 411 PIIYDFLKQS 420
             +  FL Q 
Sbjct: 358 RKVERFLSQP 367


>gi|326492854|dbj|BAJ90283.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 554

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 183/417 (43%), Gaps = 24/417 (5%)

Query: 22  QGGYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
             G +  +      V     L   +   + + +  +    + Q +    ++V    +   
Sbjct: 83  SVGQVCQVIGAVVDVRFDEGLPPILTALEVLDNSIRLVLEVAQHLG--ENVVRTIAMDGT 140

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V + G    +       GR+IN +G+PID    +   D  + I  + P  + 
Sbjct: 141 EGLVRGQKVLNTGSPITVPVGRATLGRIINVIGEPIDHKGDIKTHDY-LPIHREAPAFVE 199

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +   ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + 
Sbjct: 200 QATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG 259

Query: 195 VGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
           VGER RE  +   + +              K  +V    +E P  R    LT +T+AE+F
Sbjct: 260 VGERTREGNDLYREMIESGVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHF 319

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +K
Sbjct: 320 RDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKK 377

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           G+IT+V ++ V  D+  DP   +  + LD   VL+RS++E G YP VDPL S SR+    
Sbjct: 378 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVDPLDSTSRMLSPH 437

Query: 365 WSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 438 VLGMDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 493


>gi|296103636|ref|YP_003613782.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058095|gb|ADF62833.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 454

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 152/418 (36%), Positives = 233/418 (55%), Gaps = 14/418 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS----DNLGQVIRINLDIVYICPVG 76
            Q G ++  T +      L   + +G   + + +          +V+  N   +++ P+ 
Sbjct: 26  RQYGKLTRATGLVMEAVGL--KLPIGALCIVERQTEQGIIPVESEVVGFNGQTLFLMPLE 83

Query: 77  IGEEISLGDLVFHWGR-----FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             + I  G  ++          ++       GRV++A G+P+DG  +   G  +  + + 
Sbjct: 84  HVDGILPGARIYALQSDSHAGKQLPVGPHLLGRVLDAQGRPLDGRPA--PGKPAAGLFTP 141

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               ++R  ++     G+R I+    +  GQR+G+FAGSG+GKS LL M AR    D ++
Sbjct: 142 TLNPLHRDPIKNVLDVGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARFTTADVIV 201

Query: 192 ISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREV++FIE+ LG+  L ++VVV A +D SPILR    + A  IAE F  +G 
Sbjct: 202 VGLIGERGREVKDFIENILGEQGLARAVVVAAPADVSPILRMQGAVYATRIAEDFRERGL 261

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLLI+DS+TR+A + RE+A   GE P  +GYP SVF+ LP L+ER G   K  G+ITA 
Sbjct: 262 NVLLIMDSLTRYAMAQREVALAIGEPPATKGYPPSVFARLPALVERTGNGVKGGGSITAF 321

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIADS R+ILDGHIVL+R LAE G YP +D  AS+SR   +     + 
Sbjct: 322 YTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTELIPHAQY 381

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428
           + V     L+  ++  RD+  +G Y  G D +LD+A+ + P +  FL Q+  + S  D
Sbjct: 382 RKVQRFKQLLSAYQRNRDLVSVGAYVKGSDAMLDQAIDKYPSLEAFLHQAIHERSGYD 439


>gi|170516130|gb|ACB15075.1| ATPase alpha subunit [Nothotsuga longibracteata]
          Length = 343

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 147/347 (42%), Gaps = 19/347 (5%)

Query: 72  ICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
           I   G    I  G LV   G    +       GRV++ALG PIDG  +L +  L   + +
Sbjct: 1   IVVFGSDTAIKEGSLVKRTGSIVSVPVGKAMLGRVVDALGVPIDGKGALSEHLLRR-VEA 59

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---- 186
           K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +      
Sbjct: 60  KAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQKRMNS 119

Query: 187 -------FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
                      +   +G++   V + ++     D L+ S+ V AT+ +   L+ +AP + 
Sbjct: 120 KSKADSEKLYCVYVAIGQKRSTVAQLVQIISEADALEYSIAVAATASDPAPLQFLAPYSG 179

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             + EYF   G + L+I D + + A + R+++      P    +P  VF    RLL+R  
Sbjct: 180 CAMGEYFRDNGMHALIIYDDLNKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLQRAA 239

Query: 299 PSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
               +   G++TA+  +     + +  I  +V SI DG I L   L   G  P ++   S
Sbjct: 240 KRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLS 299

Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           VSR+   A     K++  SL   + ++ E   +     +   +D   
Sbjct: 300 VSRVGSAAQLKAMKQVCGSLKLELAQYRE---VAAFAQFGSDLDAAT 343


>gi|78224596|ref|YP_386343.1| F0F1 ATP synthase subunit beta [Geobacter metallireducens GS-15]
 gi|118573539|sp|Q39Q56|ATPB_GEOMG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78195851|gb|ABB33618.1| ATP synthase F1 subcomplex beta subunit [Geobacter metallireducens
           GS-15]
          Length = 470

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/416 (25%), Positives = 187/416 (44%), Gaps = 18/416 (4%)

Query: 19  LVVQGGYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVY 71
           +    G IS +      V         +     V +   +      V+     +  + V 
Sbjct: 1   MSQNFGRISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENSVR 60

Query: 72  ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
              +   + +  G      G+   +       GR++N +G+P+D    +   +    I  
Sbjct: 61  TIAMDSTDGLVRGQAALDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVN-AEKEYGIHR 119

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
           + P  +++    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +      
Sbjct: 120 ESPSFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHG 179

Query: 191 ---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246
              + + VGER RE  +   +     +  K+ +V    +E P  R    L+A++IAEYF 
Sbjct: 180 GFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFR 239

Query: 247 SKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305
            +   NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG
Sbjct: 240 DEEGQNVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTTKG 297

Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-A 364
           +IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D   
Sbjct: 298 SITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQV 357

Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              +   +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 358 IGEEHYAIARQVQYVLQKYKDLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 412


>gi|157804173|ref|YP_001492722.1| F0F1 ATP synthase subunit beta [Rickettsia canadensis str. McKiel]
 gi|166222408|sp|A8F004|ATPB_RICCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157785436|gb|ABV73937.1| F0F1 ATP synthase subunit beta [Rickettsia canadensis str. McKiel]
          Length = 473

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 112/415 (26%), Positives = 186/415 (44%), Gaps = 22/415 (5%)

Query: 24  GYISSITSVYYTV--TCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIGEE 80
           G I+ I S    V  T  S+   + + +     N   + +V++ I  D V    +   E 
Sbjct: 6   GKITQIISAVVDVKFTNNSKLPAILNALECYSDNQRIVLEVVQHIGDDTVRCIAMDSTEG 65

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V   G    I       GR++N +G+ IDG   +   ++S  I    P   N+ 
Sbjct: 66  LVRGLEVVDTGSPICIPVGTATLGRIMNVVGESIDGKGEIKSSNVS-SIYKPAPSFTNQS 124

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
                  TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 125 SERTILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVG 184

Query: 197 ERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAE--YFS 246
           ER RE  +   + +             K  +V    DE P  R    L+ +TIAE     
Sbjct: 185 ERTREGNDLYHEMIDSGVINLEEPEKSKVALVYGQMDEPPGARARVALSGLTIAESFRDM 244

Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  + G+
Sbjct: 245 NEGQDVLFFVDNIFRFTQAGSEVSALLGRVPSAVGYQPTLATDMGALQERI--TSTKHGS 302

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ D    
Sbjct: 303 ITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIV 362

Query: 367 ADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +E   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 363 GEEHYSVARQVQQVLQTYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 416


>gi|149798671|gb|ABR32026.1| ATP synthase beta chain [Cheilanthes nitidula]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|42558360|gb|AAS19889.1| ATP synthase beta chain [Lellingeria apiculata]
          Length = 422

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|302747374|gb|ADL63168.1| Atp1 [Calyptrotheca somalensis]
          Length = 350

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 18/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L        +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSGDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCF-----------DKVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++     N
Sbjct: 119 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAVGQKRSTVAQLVQILSEAN 178

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 179 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 238

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 239 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 298

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 299 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 350


>gi|149798673|gb|ABR32027.1| ATP synthase beta chain [Cheilanthes viridis]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149384799|gb|ABR25208.1| ATP synthase beta chain [Thelypteris longissima]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L++    
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +            +  K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESRVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLSFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|302381246|ref|YP_003817069.1| ATP synthase F1 subunit beta [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191874|gb|ADK99445.1| ATP synthase F1, beta subunit [Brevundimonas subvibrioides ATCC
           15264]
          Length = 519

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/423 (25%), Positives = 183/423 (43%), Gaps = 30/423 (7%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQG---KNSDNLGQVIR----INLDIVYICPVG 76
           G I+ +      V    Q   + + +  Q    K  +    V+     +  ++V    + 
Sbjct: 40  GKIAQVIGAVVDVEFTGQLPAILNALETQNVDQKTGEPFTLVLEVAQHLGENMVRAISMD 99

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             E ++ G  V   G            GR++N +G PID    +    +   I  + P  
Sbjct: 100 TTEGLTRGQPVTDTGTSILAPVGPGTLGRIMNVVGAPIDEQGPIATT-MYRPIHREAPTF 158

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL- 194
             +    +   TGI+VID+  P   G +IG+F G+G+GK+  +     +        S+ 
Sbjct: 159 EEQSTSSEILVTGIKVIDLICPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVL 218

Query: 195 --VGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAV 239
             VGER RE  +   + +  N+              K  +V    +E P  R    LT +
Sbjct: 219 AGVGERTREGNDLYHEMIESNVNVDPSKNGGSTEGSKCALVYGQMNEPPGARARVALTGL 278

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI 
Sbjct: 279 AQAEYFRDEEGKDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGNLQERI- 337

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +  +KG+IT+V ++ V  D+  DP   +  + LD   VLNR +A +  +P VDPL S S
Sbjct: 338 -TSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLNRDIAAQAIFPAVDPLDSTS 396

Query: 359 RLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D     +E   +  S+  ++ +++  +DI  I G     +      V +   I  FL
Sbjct: 397 RIMDPLVIGEEHYLVARSVQEVLQQYKALKDIIAILGMDELSEED-KLIVSRARKIQRFL 455

Query: 418 KQS 420
            Q 
Sbjct: 456 SQP 458


>gi|218197235|gb|EEC79662.1| hypothetical protein OsI_20905 [Oryza sativa Indica Group]
          Length = 538

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 19/371 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V + G    +       GR++N +G+PID    +    
Sbjct: 110 LGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNH 169

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I  + P  + +   ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 170 F-LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELIN 228

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILR 231
           +         + + VGER RE  +   + +              K  +V    +E P  R
Sbjct: 229 NVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGAR 288

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AE+F      +VLL +D+I RF  +  E++   G +P A GY  ++ ++L
Sbjct: 289 ARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDL 348

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP 
Sbjct: 349 GGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPA 406

Query: 351 VDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+        D       +  ++  ++  +DI  I G     +      V +
Sbjct: 407 VDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVAR 465

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 466 ARKIQRFLSQP 476


>gi|302747392|gb|ADL63177.1| Atp1 [Choristylis rhamnoides]
          Length = 349

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G    +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGVSFNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  SL   + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSLKLELAQ 349


>gi|255733362|gb|ACU31113.1| ATP synthase beta subunit [Brachionus plicatilis]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/402 (26%), Positives = 181/402 (45%), Gaps = 20/402 (4%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
           +  +G++   + +V   +  + V    +   E +  G      G   RI       GR++
Sbjct: 9   LEVEGRSPKLILEVAQHLGGNTVRTIAMDGTEGLVRGQNCADTGSPIRIPVGPATLGRIM 68

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+PID    +   +    I ++ P        ++  +TGI+V+D+  P   G +IG+
Sbjct: 69  NVIGEPIDERGPI-TTESFAPIHAEAPEFTEMSVEQEILETGIKVVDLLAPYAKGGKIGL 127

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG------DNLKKS 217
           F G+G+GK+ L+     +         + + VGER RE  +   + +           K 
Sbjct: 128 FGGAGVGKTVLVMELIYNVAKSHGGYSVFAGVGERTREGNDLYHEMITTKVIDLQEHSKV 187

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +
Sbjct: 188 SLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 247

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +++  + ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   
Sbjct: 248 PSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 305

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395
           VL+R +AE G YP VDPL S SR+ D      +   +   +  ++  F+  +DI  I G 
Sbjct: 306 VLSRGIAELGIYPAVDPLDSTSRMMDPNVVGEEHYNVARGVQKILQDFKSLQDIIAILGM 365

Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
               +      V +   I  FL Q        +VF     KL
Sbjct: 366 DELSEDD-KITVARARKIQRFLSQP---FQVAEVFTGTQGKL 403


>gi|119350475|gb|ABL63188.1| AtpB [Chlorella vulgaris]
          Length = 391

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 168/365 (46%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +   A   GR+ N LG+P+D    +   D  + I
Sbjct: 4   VRAVAMSATDGLMRGMEVLDSGKPLNVPVGAATLGRIFNVLGEPVDNLGPVNTKDQ-LPI 62

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 63  HRSAPAFVDLDTKLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 122

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 123 HGGVSVFGGVGERTREGNDLYMEMKESGVINESNISESKVALVYGQMNEPPGARMRVGLT 182

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AE+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 183 ALTMAEFFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 242

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 243 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLASKGIYPAVDPLDS 300

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       D   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 301 TSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 359

Query: 416 FLKQS 420
           FL Q 
Sbjct: 360 FLSQP 364


>gi|149384705|gb|ABR25161.1| ATP synthase beta chain [Microsorum grossum]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMSAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 60  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|320354740|ref|YP_004196079.1| ATP synthase F1 subcomplex subunit beta [Desulfobulbus propionicus
           DSM 2032]
 gi|320123242|gb|ADW18788.1| ATP synthase F1 subcomplex beta subunit [Desulfobulbus propionicus
           DSM 2032]
          Length = 473

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/363 (28%), Positives = 169/363 (46%), Gaps = 11/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    I   A   GR++N +G+P+DG   +   +
Sbjct: 55  LGDNCVRTVAMDQTDGLVRGMEVRDTGFPITIPVGAPALGRIMNVVGRPVDGMGPIS-SE 113

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            SM I    P  + +       +TGI+VID+  P   G ++G+F G+G GK+ ++     
Sbjct: 114 KSMPIHRPAPLFIEQDTEVNVLETGIKVIDLLVPFPRGGKMGLFGGAGCGKTVIMMEMVN 173

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         +   VGER RE  +   +     +  K+ +V     E P  R    LT +
Sbjct: 174 NIAMQHGGISVFCGVGERTREGNDLYNEMKESGVLPKAALVYGQMTEPPGARSRVALTGL 233

Query: 240 TIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T AEYF  +   +VL  +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI 
Sbjct: 234 TAAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDLGALQERI- 292

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
            +   KG+ITAV  V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S S
Sbjct: 293 -TSTTKGSITAVQCVYVPADDLTDPAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTS 351

Query: 359 RLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           R+ D      +  +    +   + +++E +DI  I G     +      V +   +  FL
Sbjct: 352 RILDPNVVGQEHYQTARGVQVALQKYKELQDIIAILGMDELSEED-QLTVARARKVQRFL 410

Query: 418 KQS 420
            Q 
Sbjct: 411 SQP 413


>gi|290745851|gb|ADD51595.1| ATP synthase beta chain [Lellingeria humilis]
          Length = 411

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 22  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 81

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 82  EPVDNLGPVQSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 140

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 141 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 200

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 201 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 260

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 261 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 318

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 319 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 378

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 379 LSEED-RLTVARARKIERFLSQP 400


>gi|224099437|ref|XP_002311483.1| predicted protein [Populus trichocarpa]
 gi|222851303|gb|EEE88850.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/413 (25%), Positives = 182/413 (44%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G++  +      V        +   +  QG +   + +V   +   +V    +   E + 
Sbjct: 88  GHVCQVIGAVVDVKFDEGLPPILTALEVQGHSIRLVLEVAQHLGESVVRTIAMDGTEGLI 147

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G    +       GR+IN +G+ ID    L K +  + I  + P  + +   
Sbjct: 148 RGQPVLNTGSPITVPVGRATLGRIINVIGEAIDEKGDL-KTEHYLPIHREAPAFVEQATE 206

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 207 QQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 266

Query: 199 GREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
            RE  +   + +              K  +V    +E P  R    LT +T+AE+F    
Sbjct: 267 TREGNDLYREMIESGVIKLGDQQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAE 326

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT
Sbjct: 327 GQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSIT 384

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SA 367
           +V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+        
Sbjct: 385 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGE 444

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 445 DHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 496


>gi|122051543|gb|ABM65874.1| ATP synthase beta chain [Lellingeria major]
          Length = 413

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 14  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 73

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 74  EPVDNLGPVQSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 132

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 133 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 192

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      + LL +D+I RF  +  E++   G +P 
Sbjct: 193 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDALLFIDNIFRFVQAGSEVSALLGRMPS 252

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 253 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 310

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 311 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 370

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 371 LSEED-RLTVARARKIERFLSQP 392


>gi|304311665|ref|YP_003811263.1| Type III secretion system ATPase [gamma proteobacterium HdN1]
 gi|301797398|emb|CBL45618.1| Type III secretion system ATPase [gamma proteobacterium HdN1]
          Length = 434

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 156/423 (36%), Positives = 227/423 (53%), Gaps = 13/423 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIG 78
           V  G +         VT +     +GD    +     ++ L + + I   I  + P+G  
Sbjct: 16  VYTGRVVEAWGTLIHVTGV--PAKIGDICRLRDPANGNELLAEAVGIKHHITLLNPLGTM 73

Query: 79  EEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +S   LV    G   +       GRV+++ G P+DG            I +  P  M 
Sbjct: 74  EGVSNTMLVEVIEGASTVPVGRELLGRVLDSQGLPLDGKPP-PNCAHRAAIYAAAPDPMK 132

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197
           R  V+K F TG++ ID    L  GQR G+FA +G GKSTLL M AR    D  ++ L+GE
Sbjct: 133 RLPVDKAFSTGVQAIDSMLTLGLGQRAGIFAMAGGGKSTLLGMLARGSESDVNVVVLIGE 192

Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           RGREVREFI++ LG + L KSVV+V+TSD   + R    L    IAEYF  KG  VLL++
Sbjct: 193 RGREVREFIDESLGAEGLAKSVVLVSTSDRPALERCRVALVGTAIAEYFRDKGLRVLLMM 252

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316
           DS+TR+A ++R+I    GE PV RG+  SVFS+LPRL ER G +EK  G IT + +VL +
Sbjct: 253 DSVTRYARALRDIGLALGEPPVRRGFTPSVFSQLPRLFERAGNNEK--GYITGIYTVLAE 310

Query: 317 GD-NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
            + +  DP+ + VRS+LDGHIVL+R LA    YP +D LAS SR+     + + ++  + 
Sbjct: 311 DEHDGEDPVTEEVRSLLDGHIVLSRKLAAAAHYPAIDVLASASRVMHNVTTPEHRQKAAR 370

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           +  L+ +++E   +  +G Y+ G D   D A+   P+I   LKQ   D +    +    +
Sbjct: 371 VRALMSKYKEVELLLQVGEYKKGTDGQADDAIRAAPMIGGLLKQ---DSTVVTPYARTLE 427

Query: 436 KLQ 438
            L+
Sbjct: 428 LLE 430


>gi|148266273|ref|YP_001232979.1| F0F1 ATP synthase subunit beta [Geobacter uraniireducens Rf4]
 gi|189081335|sp|A5G9D8|ATPB_GEOUR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|146399773|gb|ABQ28406.1| ATP synthase F1 subcomplex beta subunit [Geobacter uraniireducens
           Rf4]
          Length = 470

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 190/411 (46%), Gaps = 18/411 (4%)

Query: 24  GYISSITSVYYTVTC-------LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           G IS +      V         +   + + +  +   +N+  L     +  + V    + 
Sbjct: 6   GKISQVIGAVIDVEFEPGKLPPIYNALRVTNPSIDDKENNLVLEVAQHLGENSVRTIAMD 65

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G+   +       GR++N +G P+D    +G  +    I  + P  
Sbjct: 66  STDGLVRGQAAIDTGKQISVPVGRKTLGRILNVIGDPVDEMGPVG-AEKEYGIHREAPAF 124

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
           +++    + F TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + 
Sbjct: 125 VDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAMQHGGFSVF 184

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   +     + +K+ +V    +E P  R    L+A++IAEYF  +   
Sbjct: 185 AGVGERTREGNDLWMEMKESGVLEKTALVYGQMNEPPGARARVALSALSIAEYFRDEEGQ 244

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+V
Sbjct: 245 NVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTNKGSITSV 302

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADE 369
            ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D      + 
Sbjct: 303 QAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEH 362

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + +++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 363 YAIARQVQYVLQKYKDLQDIIAILGMDELSEED-KLVVARARKIQRFLSQP 412


>gi|149798683|gb|ABR32032.1| ATP synthase beta chain [Doryopteris ludens]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    +  G 
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVRSG- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149798719|gb|ABR32050.1| ATP synthase beta chain [Pentagramma triangularis]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTASTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|258690452|gb|ACV87988.1| ATP synthase beta subunit [Aphrocallistes vastus]
          Length = 426

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/384 (26%), Positives = 177/384 (46%), Gaps = 18/384 (4%)

Query: 51  HQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINA 108
            +G+    + +V   +  + V    +   E +  G+ V   G    I       GR+IN 
Sbjct: 10  VEGREPKLILEVAQHLGENTVRTIAMDGTEGLVRGNKVHDTGGPITIPVGRKTLGRIINV 69

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G PID    +G  +    I  + P  +     +   +TGI+V+D+  P   G +IG+F 
Sbjct: 70  IGDPIDERGPIG-SEHEANIHQEAPEFIEMSVAQNILETGIKVVDLLAPYARGGKIGLFG 128

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSV 218
           G+G+GK+ L+     +         + + VGER RE  +   + +        D+  K  
Sbjct: 129 GAGVGKTVLIMELINNIASAHGGYSVFAGVGERTREGNDLYHEMIATKVISLDDDKSKVS 188

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT + +AE+F  K   +VLL +D+I RF  +  E++   G +P
Sbjct: 189 LVYGQMNEPPGARARVCLTGLAVAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 248

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   V
Sbjct: 249 SAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTV 306

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R +AE G YP VDPL S SR+ D      +   +   +  ++  ++  +DI  I G  
Sbjct: 307 LSRGIAELGIYPAVDPLDSTSRIMDPHIVGAEHYAIARGVQKVLQNYKSLQDIIAILGMD 366

Query: 397 PGVDLILDKAVHQVPIIYDFLKQS 420
              +      V +   +  FL Q 
Sbjct: 367 ELSEED-KLTVSRARKMQRFLSQP 389


>gi|4519280|dbj|BAA75555.1| ATP synthase beta-subunit [Volvox globator]
          Length = 376

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D    + K + ++ I   
Sbjct: 1   VSMNPTEGLMRGMDVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMG-IVKVEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|23503615|dbj|BAC20404.1| ATP synthase beta-subunit [Chlamydomonas kuwadae]
          Length = 376

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G D+V       +       GR+ N LG+P+D    +   DL + I  +
Sbjct: 1   VAMNPTDGLMRGMDVVDSGNPLTVPVGKVTLGRIFNVLGEPVDNMGPVDSTDL-LPIHRQ 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYAEMKESGVIVEKNLQDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFVDNIFRFVQAGAEVSALLGRVPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP      + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPAVTFAHLDATTVLSRNLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +    +   +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYGVAQQIKRTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|317969006|ref|ZP_07970396.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CB0205]
          Length = 486

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 188/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G +  +      V   +  +  + + +  +GKNS         +V ++  D  V    + 
Sbjct: 11  GIVRQVIGPVIDVEFPAGKLPKIYNALRIEGKNSAGQDVALTAEVQQLLGDHRVRAVAMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +     +  I  + P  
Sbjct: 71  GTDGLVRGMGALDTGAPISVPVGEATLGRIFNVLGEPVDEQGPVNTT-TTAPIHREAPKL 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            + +   K F+TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 130 TDLETKPKVFETGIKVIDLLAPYRQGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 190 GGVGERTREGNDLYEEFKESGVINAEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 250 FRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTL 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   D   +   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 SVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIEKFLSQP 424


>gi|3850956|gb|AAC72170.1| ATP synthase beta subunit [Xylomelum scottianum]
          Length = 490

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 180/418 (43%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNS-----DNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     +   + + +V +G+++     +   +V ++  +  V    + 
Sbjct: 13  GRIAQIIGPVLDVAFPPGKMPNIYNALVIKGQDTAGHQINVTCEVQQLLGNNRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +             P  
Sbjct: 73  ATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDXX-XXXXXXRSAPAF 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           +        F+TGI+  D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 132 IQLDTKLSIFETGIKXXDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 192 GGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEY 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 252 FRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTK 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +    +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 RIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 426


>gi|122051547|gb|ABM65876.1| ATP synthase beta chain [Lellingeria subcoriacea]
          Length = 403

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 4   GQEIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 63

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 64  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 122

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  +     +       +S+ G   ER RE  +   +               K  +
Sbjct: 123 GVGKTVPIMESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 182

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 183 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 242

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 243 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 300

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 301 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 360

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 361 LSEED-RLTVARARKIERFLSQP 382


>gi|225850269|ref|YP_002730503.1| flagellar protein export ATPase FliI [Persephonella marina EX-H1]
 gi|225645680|gb|ACO03866.1| flagellar protein export ATPase FliI [Persephonella marina EX-H1]
          Length = 443

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 144/418 (34%), Positives = 224/418 (53%), Gaps = 14/418 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83
           G I+ +      +  +   V +GD  + +        +V+        +        I +
Sbjct: 17  GKITGVVGPV--IEAVLPKVSIGDACILENG---LEAEVVGFKDGKTLLMAFDDTIGIRV 71

Query: 84  GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142
           G  V        I       G V++  GKP+   D +          + + P ++R+R++
Sbjct: 72  GSWVEARQEPVSIEVGEELLGTVLDPFGKPL-NKDRINPSHHYYLKNATINP-LDRERIK 129

Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202
           +    G+R I+    +  GQRIG+F+G+G+GKSTLL M +R    D  +I+L+GERGREV
Sbjct: 130 EPLDVGVRSINALLTIGKGQRIGIFSGAGVGKSTLLGMISRFTEADVNVIALIGERGREV 189

Query: 203 REFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261
           REFIED    + LKKSVV+VATSD++P+ +  A  +A+ +A++FS+ G NVL +LDS+TR
Sbjct: 190 REFIEDNLGEEGLKKSVVIVATSDQTPLAKIRAAYSAIAVAKFFSNSGKNVLFLLDSLTR 249

Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321
            A + REI    GE P  +GY  SVF+ LP+ +E+ G     +G+IT + +VLV+GD+  
Sbjct: 250 LAMAQREIGLAVGEPPTTKGYTPSVFALLPKFIEQAGNFYN-RGSITGIYTVLVEGDDIT 308

Query: 322 -DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DP+AD+    LDGHIVL+R LA +  +P +D L SVSRL  +  S D  K     T + 
Sbjct: 309 MDPVADAAMGFLDGHIVLSRELANKRVFPAIDVLKSVSRLMPQIVSDDILKYQGIFTEIE 368

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438
             + E  D+  +G Y+ G    +D A+     +  F+KQ   D+  +    E  K+L+
Sbjct: 369 SIYREAEDMINLGLYKKGTTPKVDLAIQMHSRMEGFIKQ---DMHKKVTLNESFKQLE 423


>gi|170293969|gb|ACB13078.1| ATP synthase beta subunit [Oedogonium cardiacum]
          Length = 366

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 18/352 (5%)

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    + + +  + I    P   +    
Sbjct: 1   RGMEVVDTGNPLLVPVGKDTLGRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAFTDLDTR 59

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
              F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 60  LSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGER 119

Query: 199 GREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249
            RE  +   +               K  +V    +E P  R    LTA+T+AEYF     
Sbjct: 120 TREGNDLYMEMKESKVIVEDNLGESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINK 179

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+
Sbjct: 180 QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITS 237

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           + +V V  D+  DP   +  S LD   VL+R LA +G YP VDPLAS S +       D 
Sbjct: 238 IQAVYVPADDLTDPAPATTFSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDA 297

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 298 HYNCAQKVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 348


>gi|159904098|ref|YP_001551442.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9211]
 gi|226740660|sp|A9BCC6|ATPB_PROM4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|159889274|gb|ABX09488.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9211]
          Length = 488

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G +  +      V   +  +  + + +  +GKN          +V ++  D  V    + 
Sbjct: 13  GIVRQVIGPVLDVEFPAGKLPKILNALRIEGKNPAGQDIGLTAEVQQLLGDHRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    + K   +  I    P  
Sbjct: 73  GTDGLVRGMEAVDTGAPISVPVGEATLGRIFNVLGEPVDEQGPI-KSSTTSPIHRSAPKL 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            + +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 132 TDLETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 192 GGVGERTREGNDLYEEFKESGVINADNLTESKVALCFGQMNEPPGARMRVGLSALTMAEH 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 252 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTL 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL R+LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   D   +   ++   + R++E +DI  I G     +    K   +   I  FL Q 
Sbjct: 370 AVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEED-RKTFDRARKIEKFLSQP 426


>gi|332526226|ref|ZP_08402359.1| type III secretion system ATPase [Rubrivivax benzoatilyticus JA2]
 gi|332110064|gb|EGJ10692.1| type III secretion system ATPase [Rubrivivax benzoatilyticus JA2]
          Length = 442

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 165/425 (38%), Positives = 238/425 (56%), Gaps = 14/425 (3%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG----QVIRINLDIVYICPV 75
           V   G +          T L     LG            L     +V+ +      + P+
Sbjct: 22  VAARGRVVQAVGTMLRATGL--PAHLGQQCRIVDPRHPQLAPLRAEVVGLADGCAMLAPL 79

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    ++LG  V    +  R+       GRV++A G+P+DG  SL  G     + +  P 
Sbjct: 80  GELRGVALGAEVELLEQQARVPCGRGLLGRVLDAFGEPLDGR-SLPPGLAGWPLRNASPN 138

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + R+ V++   TG+R ID+   +  GQR+GVFA +G GKSTLL+M AR    D  +I+L
Sbjct: 139 PLARRPVDQALATGVRAIDLALTVGVGQRVGVFAMAGGGKSTLLAMLARGAQADLNVIAL 198

Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREVREFI+D LG + L +SVVVVATSD   + R  A  TA  IAE F + G +VL
Sbjct: 199 VGERGREVREFIDDSLGAEGLARSVVVVATSDRPAMERARAAETATAIAEGFRAGGAHVL 258

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TR+A ++REI  + GE  V RGYP SVF+ELPRL ER G     +G ITA  +V
Sbjct: 259 LMMDSVTRYARALREIGLSVGEPAVRRGYPPSVFAELPRLFERAG--HDAQGAITAFYTV 316

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L + ++ +DP+A+ VRSILDGH+VL+R+L   G YP +D LAS SR+  +  +A  +   
Sbjct: 317 LAEDEDGSDPVAEEVRSILDGHVVLSRALGAAGHYPAIDLLASASRVFPRVTAAAHQAAA 376

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433
             L  L+ R  E R +  +G Y+ G D + D+A+ ++P +   L+Q+P + +      E 
Sbjct: 377 RELRALLARHAEIRFLLQVGEYQAGSDALADRAIERMPRLEALLRQAPDEHTPP---AEA 433

Query: 434 TKKLQ 438
             +LQ
Sbjct: 434 LARLQ 438


>gi|290745865|gb|ADD51602.1| ATP synthase beta chain [Lellingeria suprasculpta]
          Length = 393

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    +    
Sbjct: 7   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVRSSA 66

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 67  IS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 125

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 126 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNXSESKVALVYGQMNEPPGARM 185

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 186 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 245

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 246 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 303

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 304 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 362

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 363 RKIERFLSQP 372


>gi|149174230|ref|ZP_01852857.1| F0F1 ATP synthase subunit alpha [Planctomyces maris DSM 8797]
 gi|148846775|gb|EDL61111.1| F0F1 ATP synthase subunit alpha [Planctomyces maris DSM 8797]
          Length = 514

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 175/412 (42%), Gaps = 14/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           ++ G ++ +   +  ++ L   V   + +         LG  + ++   V +  +  GE+
Sbjct: 32  IEIGKVTYVGRSHARISGL-PNVQSEELLQFP---HHILGLALNLDEHEVGVVLLDHGEQ 87

Query: 81  ISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           ++ GD V    R   +       GRVI+ +G+P+DG   +   +            ++R 
Sbjct: 88  LTAGDEVRRTHRLLDVPVGESLIGRVIDPVGRPLDGHGPITAAE-RRPYERDPAAIIDRA 146

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGE 197
            V    +TG++VID   P+  GQR  +      GK+ +   ++  + +     I   +G+
Sbjct: 147 PVTVPLQTGLKVIDALIPIGRGQRELILGDRQTGKTAIAIDTILNQKNKDVICIYCAIGQ 206

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256
           R   V + I+D       + + VVV  SD  P L+ +AP  A T+ EYF  +G +VL+I 
Sbjct: 207 RNTAVAKVIDDLRTQGALEYTTVVVGESDAPPGLQFVAPYAATTLGEYFMDQGQDVLVIY 266

Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVL 314
           D +T  A S RE++      P    +P  +F    RLLER          G++TA+    
Sbjct: 267 DDLTSHARSYRELSLLLRRPPGREAFPGDIFYLHSRLLERSTHLADRLGGGSLTALPIAE 326

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374
            +  N +  I  ++ SI DG I L+  L ++G  P VD   SVSR+  K      + +  
Sbjct: 327 TEAQNLSAYIPTNLISITDGQIYLSPQLFQKGILPAVDVGRSVSRVGGKTQLPAYRAVAG 386

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
            L     +FEE         +   +D      + +   + +  KQ      S
Sbjct: 387 DLRLSYSQFEELE---AFSRFSSRLDSETLATLERGRRVREIFKQPQYQPLS 435


>gi|163785175|ref|ZP_02179863.1| F0F1 ATP synthase subunit beta [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879556|gb|EDP73372.1| F0F1 ATP synthase subunit beta [Hydrogenivirga sp. 128-5-R1-1]
          Length = 477

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 13/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I    V     G  + +  G  V + G   ++       GR+ N +GKPID    + + +
Sbjct: 58  IGEKRVRTVAYGPTDGLVRGQEVENLGSPVKVPVGKAALGRIFNVVGKPIDEAGPV-EAE 116

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P   ++    + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     
Sbjct: 117 EHWPIFRPAPTFEDQATKVEIFETGIKVIDLLVPFIKGGKVGLFGGAGVGKTVLMQELIH 176

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         ++  VGER RE  +   +     +   + +V    +E P +R     T +
Sbjct: 177 NIAKFHSGYSVVVGVGERTREGNDLWMEMKESGVLPYTAMVYGQMNEPPGVRFRVAHTGL 236

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           TIAEYF   +  +VL+ +D+I RF  +  E++T  G LP A GY  ++ +++  + ERI 
Sbjct: 237 TIAEYFRDVENQDVLIFIDNIFRFVQAGAEVSTLLGRLPSAVGYQPTLGTDVGEVQERIA 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
               + G+IT++ +V V  D+  DP   S+ + LD  IVL R LAE G YP +DPL S S
Sbjct: 297 --STKNGSITSIQAVYVPADDITDPAPASIFAHLDATIVLQRRLAELGIYPAIDPLESTS 354

Query: 359 R-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDF 416
           + LA +    +   +   +  ++ R++E ++I  I G     +   DKA V++   I  F
Sbjct: 355 KALAPEYVGEEHYTVAREVQRILQRYKELQEIIAILGMEELSEE--DKATVYRARKIQRF 412

Query: 417 LKQ 419
           L Q
Sbjct: 413 LAQ 415


>gi|113910944|gb|ABI48204.1| ATPase beta subunit [Davallia fejeensis]
          Length = 449

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + +  G      G    +       GR+ N LG
Sbjct: 18  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLG 77

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +  G  +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 78  EPVDNLGPVQSG-TTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 136

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  +     +       +S+ G   ER RE  +   +               K  +
Sbjct: 137 GVGKTVPIMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 196

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 197 VYGQMNEPPGARMRVGSTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 256

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 257 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 314

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 315 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 374

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +    + V +   I  FL Q 
Sbjct: 375 LSEGD-RQTVARARKIERFLSQP 396


>gi|20467387|gb|AAL27824.1| ATPase beta subunit [Ephedra equisetina]
          Length = 458

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 31  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 90

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 91  EPVDNLGPIDTS-TTFXIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 149

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 150 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIIESKVAL 209

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L A+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 210 VYGQMNEPPGARMRVGLPALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 269

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 270 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 327

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 328 SRGLAAKGIYPAVDPLDSTSAMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 387

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 388 LSEED-RLTVARARKIERFLSQP 409


>gi|302747410|gb|ADL63186.1| Atp1 [Coriaria myrtifolia]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/352 (23%), Positives = 146/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKNLNSRATSESETLYCVYVAIGQKRSTVAQLVKILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|170294001|gb|ACB13094.1| ATP synthase beta subunit [Caulerpa brownii]
          Length = 367

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/351 (28%), Positives = 160/351 (45%), Gaps = 16/351 (4%)

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V   G    +       GR+ N LG+P+D    +        I  + P  ++ +  
Sbjct: 1   RGMTVVDTGEPITVPVGNTTLGRIFNVLGEPVDNLGDVASESPRSSIHREAPAFVDLETT 60

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGER 198
              F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 61  LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIVELINNIALQHSGLSVFAGVGER 120

Query: 199 GREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
            RE  +F  +               K  +V    +E P  R    LT +T+AE F  +G 
Sbjct: 121 TREGNDFYFEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGR 180

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I R+  +  E++   G +P A GY  ++ SE+  L ERI  +  + G+IT++
Sbjct: 181 DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSI 238

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            ++ V  D+  DP      + LD   VL+R LA +G YP VDPL S S +       +  
Sbjct: 239 QAIYVPADDLTDPAPAITFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGEQH 298

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 299 YNCAQNVQQTLQRYKELQDIIAILGLDELSEQD-RLIVARARKIERFLSQP 348


>gi|4519332|dbj|BAA75581.1| ATP synthase beta-subunit [Volvulina pringsheimii]
          Length = 376

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/362 (28%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   D ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVLDTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVLIED-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEDD-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|302747322|gb|ADL63142.1| Atp1 [Aextoxicon punctatum]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +LG+ +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALGEHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++  +SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKTMKQVCGSSKLELAQ 349


>gi|124022212|ref|YP_001016519.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT
           9303]
 gi|123962498|gb|ABM77254.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT
           9303]
          Length = 532

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 184/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G +  +      V   +  +  + + +   GKN          +V ++  D  V    + 
Sbjct: 57  GVVRQVIGPVLDVEFPAGKLPKILNALRIDGKNPSGQHIAITAEVQQLLGDHRVRAVAMS 116

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +   D +  I    P  
Sbjct: 117 STDGLVRGMEALDTGSAISVPVGEATLGRIFNVLGEPVDEQGPV-TTDATAPIHRPAPKL 175

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
              +     F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 176 TELETKPTVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 235

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 236 GGVGERTREGNDLYEEFKESGVINSDDLSKSKVALCFGQMNEPPGARMRVGLSALTMAEH 295

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 296 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTL 353

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL R+LA +G YP VDPL S S +   
Sbjct: 354 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQP 413

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   D   +   S+   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 414 SVVGDEHYRTARSVQATLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIEKFLSQP 470


>gi|20467359|gb|AAL27810.1| ATPase beta subunit [Ephedra americana]
          Length = 427

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    +    
Sbjct: 44  LGTNTVRXVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLGEPVDNLGPIDTS- 102

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 103 TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 162

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-----------KSVVVVATSDESPILRK 232
           +       +S+ G  G   RE  + ++                K  +V    +E P  R 
Sbjct: 163 NIAKAHGGVSVFGGVGERTREGNDPHMEMKESGVINEKNIIESKVALVYGQMNEPPGARM 222

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 223 RVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG 282

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 283 SLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 340

Query: 352 DPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +       +   ++   +   + R++E +DI  I G     +      V + 
Sbjct: 341 DPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 399

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 400 RKIERFLSQP 409


>gi|82702778|ref|YP_412344.1| F0F1 ATP synthase subunit alpha [Nitrosospira multiformis ATCC
           25196]
 gi|115312231|sp|Q2Y8G9|ATPA2_NITMU RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP
           synthase F1 sector subunit alpha 2; AltName:
           Full=F-ATPase subunit alpha 2
 gi|82410843|gb|ABB74952.1| ATP synthase F1, alpha subunit [Nitrosospira multiformis ATCC
           25196]
          Length = 511

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 111/429 (25%), Positives = 178/429 (41%), Gaps = 16/429 (3%)

Query: 5   LETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63
              +A   +  +  L + + G I SI +    V+ L    C  + +   G      G   
Sbjct: 14  FSRIALARKIVTPRLMLKEIGVIKSIGTGIAKVSGL-PGTCFEEVLKFPGG----YGIAF 68

Query: 64  RINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKG 122
            I  + + +  +G    +  GD V   G    +       GR++N LG+ +DG+  +   
Sbjct: 69  NIEEEEIGVILLGDHSHLRAGDEVERRGHVMDVPVGDALIGRIVNPLGRALDGEAPVISS 128

Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SM 180
              M I    P  M+R  V    +TGI+VID   P+  GQR  +      GKS +   ++
Sbjct: 129 -RRMPIERPAPQIMDRAPVTVPLQTGIKVIDALIPVGRGQRELILGDRQTGKSAIALDTI 187

Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239
             + D     I   +G++   V + +      D L  +VVVV   ++ P L  +AP  A 
Sbjct: 188 LNQKDENVVCIYCAIGQQASSVAKVVAALQENDALSYTVVVVTEGNDPPGLIYVAPYAAT 247

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG- 298
            I EYF  +G +VL++ D ++  A + RE++      P    YP  +F    RLLER   
Sbjct: 248 AIGEYFMEQGRDVLIVYDDLSHHARAYRELSLLMRRPPGREAYPGDIFYIHSRLLERATH 307

Query: 299 -PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
              E   G++TA+  V  + ++    I  ++ SI DG I L+ +L + G  P +D   SV
Sbjct: 308 LRPELGGGSLTALPIVETEAEDIAAYIPTNLISITDGQIYLSPTLFQLGILPAIDVGKSV 367

Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417
           SR+  KA     +     L     +F E       GG    +D      +     I   L
Sbjct: 368 SRVGGKAQRPVYRAATGELRLDYSQFSELETFTRFGGR---LDERTRTVIEHGRRIRACL 424

Query: 418 KQSPSDLSS 426
           +Q  S   S
Sbjct: 425 QQPESSPVS 433


>gi|1168575|sp|P43451|ATPB_ENTHR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|153573|gb|AAA26859.1| H+ ATPase [Enterococcus faecalis]
          Length = 468

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 118/414 (28%), Positives = 190/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSD---NLGQVIRINLDIVYIC 73
           +  G I  +      V   S    L D     VV++         L   + +   ++   
Sbjct: 1   MSSGKIVQVIGPVVDVE-FSLDQSLPDINNALVVYKNDEKKSKVVLETALELGDGVIRTI 59

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G+   +       GRV N LG  ID   S  +     EI  K 
Sbjct: 60  AMESTDGLQRGMEVIDTGKAISVPVGKDTLGRVFNVLGDTIDLGSSFPEDAERSEIHKKA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   I
Sbjct: 120 PSFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGI 179

Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           S+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF   
Sbjct: 180 SVFTGVGERTREGNDLYYEMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDV 239

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG+I
Sbjct: 240 EGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSI 297

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA-SVSRLADKAWS 366
           T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA S S LA +   
Sbjct: 298 TSIQAIYVPADDYTDPAPATAFAHLDATTNLERKLTEQGIYPAVDPLASSSSALAPEIVG 357

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  K+ + + H++ R+ E +DI  I G     D      V +   +  FL Q+
Sbjct: 358 EEHYKVATEVQHVLQRYRELQDIIAILGMDELSDQE-KVLVSRARRVQFFLSQN 410


>gi|86438834|emb|CAJ43382.1| ATP synthase alpha subunit [Lactobacillus gallinarum]
 gi|133917170|emb|CAJ33226.1| ATP synthase alpha subunit [Lactobacillus gallinarum]
          Length = 353

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/355 (27%), Positives = 156/355 (43%), Gaps = 10/355 (2%)

Query: 55  NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPI 113
           ++ + G    ++   V I  +G  ++I  GD V   GR   +       GRV+N LG+P+
Sbjct: 3   DNGSYGIAQNLDASDVGIIILGKFDDIREGDRVQRTGRIMSVPVGDALIGRVVNPLGQPV 62

Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173
           DG   + K D +  I  K P  M+RQ V +  +TGI+ ID   P+  GQR  +      G
Sbjct: 63  DGLGEI-KADKTRPIEEKAPGVMDRQSVNQPLQTGIKAIDALVPIGRGQRELIIGDRKTG 121

Query: 174 KS--TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230
           K+   + ++  + +     I   +G++   VR  +E       +  ++VV A   E   +
Sbjct: 122 KTSLAIDTILNQKNQDVICIYVAIGQKESTVRTQVETLKRFGAMDYTIVVEAGPSEPAPM 181

Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
             +AP     + E F   G +VL++ D +++ A + RE++      P    YP  VF   
Sbjct: 182 LYIAPYAGTAMGEEFMYNGKDVLIVFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLH 241

Query: 291 PRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348
            RLLER      +   G++TA+  +  +  + +  I  +V SI DG I L   L   G  
Sbjct: 242 SRLLERSAKLSDKLGGGSLTALPIIQTEAGDISAYIPTNVISITDGQIFLQSDLFFAGTR 301

Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403
           P +D   SVSR+   A     KK+  +L   +  F E       G     +D   
Sbjct: 302 PAIDAGNSVSRVGGNAQIKAMKKVAGTLRTDLAAFRELESFAQFG---SDLDQAT 353


>gi|290745857|gb|ADD51598.1| ATP synthase beta chain [Lellingeria major]
          Length = 411

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 22  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 81

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 82  EPVDNLGPVQSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 140

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 141 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 200

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 201 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 260

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 261 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 318

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 319 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 378

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 379 LSEED-RLTVARARKIERFLSQP 400


>gi|119350525|gb|ABL63213.1| AtpB [Oocystis apiculata]
          Length = 387

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    + +   +  I
Sbjct: 2   VRAVSMSATDGLMRGMDVLDTGNPLTVPVGQATLGRIFNVLGEPVDNLGPV-ENKEAFPI 60

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F++GI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 61  HRSAPAFVDLDTKLSIFESGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 120

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 121 HGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLT 180

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 181 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 240

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S
Sbjct: 241 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRALASKGIYPAVDPLDS 298

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 299 TSTMLQPWIVGEEHYECAQNVKQTLQRYKELQDIIAILGLDELSEED-RLTVARARKIER 357

Query: 416 FLKQS 420
           FL Q 
Sbjct: 358 FLSQP 362


>gi|3913122|sp|O50292|ATPB_AQUPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|2687826|emb|CAA75780.1| F1F0-ATPase beta subunit [Aquifex pyrophilus]
          Length = 478

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 194/420 (46%), Gaps = 25/420 (5%)

Query: 21  VQGGYISSITSVYYTVT--CLSQYVCLGDFVVHQGKNSDNLG----QVI------RINLD 68
           V  G I  +      V    + +   + D +    +  D+ G    +V+       I   
Sbjct: 4   VIKGRIVQVIGPVVDVEFEGVKELPRIKDGLKTIRRAIDDRGNWFEEVLFMEVAQHIGEH 63

Query: 69  IVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +G  + +  G  V +  G  +I       GR+ N  G+PID    +   +    
Sbjct: 64  RVRAIAMGPTDGLVRGQEVEYLGGPIKIPVGKEVLGRIFNVAGQPIDEQGPVEAKEY-WP 122

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           +    P  + +    +  +TGI+VID+  P+  G ++G+F G+G+GK+ L+     +   
Sbjct: 123 MFRNPPELVEQSTKVEILETGIKVIDLLQPIIKGGKVGLFGGAGVGKTVLMQELIHNIAR 182

Query: 188 DK---VIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAE 243
                 ++  VGER RE  +   +     +   +V+V    +E P +R     T +T+AE
Sbjct: 183 FHEGYSVVVGVGERTREGNDLWLEMKESGVLPYTVMVYGQMNEPPGVRFRVAHTGLTMAE 242

Query: 244 YFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           YF      +VL+ +D+I RF  +  E++T  G LP A GY  ++ +++  + ERI  +  
Sbjct: 243 YFRDVEGQDVLIFIDNIFRFVQAGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TST 300

Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA- 361
           +KG+ITA+ +V V  D+  DP   S+ + LD   VL R LAE G YP +DPL S S+   
Sbjct: 301 KKGSITAIQAVYVPADDITDPAPWSIFAHLDATTVLTRRLAELGIYPAIDPLESTSKYLA 360

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQVPIIYDFLKQS 420
            +    +  ++   +  ++ R++E ++I  I G     +   DKA+ ++   I  FL Q 
Sbjct: 361 PEYVGEEHYEVAMEVKRILQRYKELQEIIAILGMEELSEE--DKAIVNRARRIQKFLSQP 418


>gi|238855947|ref|ZP_04646233.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 269-3]
 gi|260664664|ref|ZP_05865516.1| ATP synthase F1, beta subunit [Lactobacillus jensenii SJ-7A-US]
 gi|282934354|ref|ZP_06339621.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
 gi|313471885|ref|ZP_07812377.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 1153]
 gi|238831420|gb|EEQ23771.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 269-3]
 gi|239529199|gb|EEQ68200.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 1153]
 gi|260561729|gb|EEX27701.1| ATP synthase F1, beta subunit [Lactobacillus jensenii SJ-7A-US]
 gi|281301564|gb|EFA93841.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
          Length = 480

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 177/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V +  +     +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDETITLEVTLELGDGVLRTISMESTDGLRRGMKVVDTGAPISVPVGDDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG PID             I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KMIVARARKIQFFLSQN 408


>gi|179183869|gb|ACB78128.1| ATPase [Vibrio breoganii]
          Length = 402

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 94/402 (23%), Positives = 167/402 (41%), Gaps = 25/402 (6%)

Query: 37  TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RI 95
             L++ V   +     G         + +  D V    +G   ++  G  V   GR   +
Sbjct: 3   HGLAE-VMASEMSELPGG---RYALALNLERDSVGAVVMGPFADLQEGMKVTGTGRILEV 58

Query: 96  SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155
                  GRV+N LG+PIDG   +    L+  +    P  ++R+ V++  +TG + +D  
Sbjct: 59  PVGPELLGRVVNTLGEPIDGKGPID-AKLTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSM 117

Query: 156 TPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213
            P+  GQR  +      GK+ +   ++  + D     I   +G++   +   +       
Sbjct: 118 IPIGRGQRELIIGDRQTGKTAMAIDAIINQKDSGIFSIYVAIGQKASTIANVVRKLEESG 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               ++VVVA++ ES  L  +AP     + EYF  +G++ L+I D +++ A + R+I+  
Sbjct: 178 ALANTIVVVASASESAALPYLAPYAGCAMGEYFRDRGEDALIIYDDVSKQAVAYRQISLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEK-------------GNITAVISVLVDGDN 319
               P    +P  VF    RLLER     +E              G++TA+  +     +
Sbjct: 238 LKRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGD 297

Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379
            +  +  +V SI DG I L   L   G  P VDP  SVSR+   A +   KKL   +   
Sbjct: 298 VSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSRVGGSAQTKIIKKLSGGIRTA 357

Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
           + ++ E   +     +   +D    K +     + + +KQ  
Sbjct: 358 LAQYRE---LAAFAQFSSDLDETTKKQLDHGAKVTELMKQKQ 396


>gi|260435742|ref|ZP_05789712.1| ATP synthase F1, beta subunit [Synechococcus sp. WH 8109]
 gi|260413616|gb|EEX06912.1| ATP synthase F1, beta subunit [Synechococcus sp. WH 8109]
          Length = 487

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I  +      V   +  +  + + +  +GKN          +V ++  D  V    + 
Sbjct: 13  GVIRQVIGPVLDVEFPAGKLPKIYNALRIEGKNPAGDDVALTAEVQQLLGDHRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  GTDGLVRGMEALDTGAPISVPVGEATLGRIFNVLGEPVDEQGPVNTS-ATAPIHRDAPNI 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
              +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 132 TELETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 192 GGVGERTREGNDLYEEFKESGVINADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ER+      
Sbjct: 252 FRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERVA--STV 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VLNR+LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   D   +   ++   + R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 370 AVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKVEKFLSQP 426


>gi|67459658|ref|YP_247282.1| F0F1 ATP synthase subunit beta [Rickettsia felis URRWXCal2]
 gi|67005191|gb|AAY62117.1| ATP synthase beta chain [Rickettsia felis URRWXCal2]
          Length = 508

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 114/435 (26%), Positives = 190/435 (43%), Gaps = 20/435 (4%)

Query: 1   MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60
           M   +  +    +  +KN+      IS++  V +T       + L     +  K    L 
Sbjct: 21  MTFFIRNIILKEKIMTKNIGKITQIISAVVDVKFTNNGELPEI-LNALECYNDKQRIVLE 79

Query: 61  QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119
               I  D V    +   E +  G  V   G   RI       GR++N +G+PIDG   +
Sbjct: 80  VAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDI 139

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
              ++S  I    P   N+        TGI+V+D+  P   G +IG+F G+G+GK+ L+ 
Sbjct: 140 KSSNIS-SIYKSAPDFTNQSTERNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIM 198

Query: 180 MFARSDCFDKV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESP 228
               +         + + VGER RE  +   + +             K  +V    +E P
Sbjct: 199 ELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVIDLEKPENSKVALVYGQMNEPP 258

Query: 229 ILRKMAPLTAVTIAE--YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286
             R    L+ +TIAE     ++G +VL  +D+I RF  +  E++   G +P A GY  ++
Sbjct: 259 GARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 318

Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346
            +++  L ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G
Sbjct: 319 ATDMGELQERI--TSTKNGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELG 376

Query: 347 RYPPVDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405
            YP VDPL S S++ D     +E   +   +  ++  ++  +DI  I G     +     
Sbjct: 377 IYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQILQTYKSLQDIIAILGMDELSEED-KL 435

Query: 406 AVHQVPIIYDFLKQS 420
            V +   I  FL Q 
Sbjct: 436 TVSRARKIQRFLSQP 450


>gi|19033099|gb|AAL83534.1|AF408806_1 ATP synthase beta subunit [Mesostigma viride]
          Length = 402

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  +   G    +       GR+ N LG+P+DG   +    
Sbjct: 2   LGDNQVRAVAMSATDGLMRGLEILDTGAPLSVPVGEITLGRIFNVLGEPVDGLGDVV-AK 60

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P  +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 61  TKFPIHRNSPTFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 120

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 121 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLSSSKVALVYGQMNEPPGARM 180

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++  E+ 
Sbjct: 181 RVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSREMG 240

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP V
Sbjct: 241 TLQERI--TSTKQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAV 298

Query: 352 DPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +       +E       +   + R++E +DI  I G     +      V + 
Sbjct: 299 DPLDSTSTMLQPWIVGEEHYGTAQRVKQTLQRYKELQDIIAILGLDELSEED-RLVVARA 357

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 358 RKIERFLSQP 367


>gi|42561403|ref|NP_975854.1| F0F1 ATP synthase subunit beta [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|81829344|sp|Q6MS94|ATPB_MYCMS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|42492901|emb|CAE77496.1| ATP SYNTHASE BETA CHAIN [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
          Length = 475

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 14/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      V      +  + D ++        + +V   I  +IV    +G  E +
Sbjct: 16  GKVIQVLGSVVDVKFSENSIPKIYDALIVDNNGKKLVLEVEQNIGDEIVRTIAMGPTEGL 75

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V +              GR+ N LG PID    L        I    P       
Sbjct: 76  KRGLDVINTNSPITAPTGMEVLGRMFNVLGDPIDEKPDLDV--KREPIHKDAPKYEELVT 133

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGE
Sbjct: 134 TTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNIAKAHNGVSVFAGVGE 193

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +++   +  K+ +V    +E P  R    LT +TIAEYF  +   +VLL 
Sbjct: 194 RTREGNDLYHEFIEAGVLNKTCLVFGQMNEPPGARMRVALTGLTIAEYFRDQKNMDVLLF 253

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V
Sbjct: 254 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSVQAVYV 311

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD  IVL+RS+A  G YP VDPLAS SR+ D      +   +  
Sbjct: 312 PADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASSSRVLDPEIVGQEHYDIAL 371

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + ++++ + I  I G     +      V +   I +FL QS
Sbjct: 372 RVQIALQKYQDLQSIIAILGMDELSEED-KLIVQRARKIRNFLSQS 416


>gi|42558368|gb|AAS19893.1| ATP synthase beta chain [Lellingeria pseudomitchellae]
          Length = 422

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSTAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  +     +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPIMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVNQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|114769416|ref|ZP_01447042.1| F0F1 ATP synthase subunit beta [alpha proteobacterium HTCC2255]
 gi|114550333|gb|EAU53214.1| F0F1 ATP synthase subunit beta [alpha proteobacterium HTCC2255]
          Length = 477

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/420 (25%), Positives = 182/420 (43%), Gaps = 20/420 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGE 79
           V  G I  +      V        + + +           +V   +  + V    +   E
Sbjct: 6   VNVGKIVQVIGAVVDVQFEDTLPEILNALETNNNGQKLTLEVAQHLGENTVRTIAMDATE 65

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +  G  V     +  +       GR++N  G+P+D    + K   S  I  + P    +
Sbjct: 66  GLVRGHEVTDTSAQITVPTGTGTLGRIMNVTGQPVDELGPV-KTTTSRPIHGEAPLFEEQ 124

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + V
Sbjct: 125 STETEILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGLSVFAGV 184

Query: 196 GERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           GER RE  +   + +             K  +V    +E P  R    LT +T+AE F  
Sbjct: 185 GERTREGNDLYHEMIESGVIVPDNMEDSKIALVYGQMNEPPGARMRIALTGLTLAEQFRD 244

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
           +   +VL  +D+I RF  +  E++   G +P A GY  ++ +++  + ERI     + G+
Sbjct: 245 ESGSDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGAMQERIA--STKAGS 302

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V +V V  D+  DP   +  + LD   VL+RS++E+G YP VDPL S SRL D    
Sbjct: 303 ITSVQAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIL 362

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425
             +   + + +  ++ R++  +DI  I G     +      V +   I  FL Q P D++
Sbjct: 363 GEEHYNVATDVQQILQRYKSLQDIIAILGMDELSEDD-KLTVTRARKIERFLSQ-PFDVA 420


>gi|315320486|ref|YP_004072542.1| ATP synthase CF1 subunit beta [Thalassiosira oceanica CCMP1005]
 gi|283568959|gb|ADB27496.1| ATP synthase CF1 subunit beta [Thalassiosira oceanica CCMP1005]
          Length = 474

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 184/414 (44%), Gaps = 21/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEE 80
           GY+S I      +   S  +        V       N+ +V ++  D  V    +   + 
Sbjct: 8   GYVSQIIGPVLDIEFPSGNLPPIYSAIKVETADGLGNIVEVQQLLGDNKVRAVSMRSTDG 67

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR+ N +G+P+D    +   D ++ I  + P     +
Sbjct: 68  LKRGVEAVDLGTPISVPVGTPTLGRIFNVIGEPVDEQGDVSL-DETLPIHREAPAFTELE 126

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 127 TKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 186

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +  E+               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 187 ERTREGNDLYEEMKESGVINSNNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 246

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+I
Sbjct: 247 NKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSI 304

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWS 366
           T++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +      +
Sbjct: 305 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVT 364

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 365 EEHYAIAENVKETLQRYKELQDIIAILGIDELSEED-RLTVARARKVERFLSQP 417


>gi|71891801|ref|YP_277530.1| F0F1 ATP synthase subunit beta [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|118573509|sp|Q494C3|ATPB_BLOPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|71795907|gb|AAZ40658.1| ATP synthase, F1 sector, beta-subunit [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 462

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 111/410 (27%), Positives = 181/410 (44%), Gaps = 14/410 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLG----DFVVHQGKNSDNLGQVIRINLDIVYICPVG 76
           +  G I  +      V      V       +  +        L    ++   IV    +G
Sbjct: 1   MSSGKIVQVIGAVVDVAFNQDVVPTVYHALEVHIDSFNKKLILEVAQQLGGGIVRCIAMG 60

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G +V +      +       GRV+N LG+PID    + + +    I    P  
Sbjct: 61  NTDGLRRGLVVINLKHSIEVPVGKETLGRVMNVLGEPIDMKGPIKEKE-KWSIHRSAPLY 119

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
                 +    TGI+VID+  P   G +IG+F G+G+GK+  +    R+   +     + 
Sbjct: 120 SELSTDQDLLVTGIKVIDLMCPFSKGGKIGLFGGAGVGKTVNMMELIRNIAVEHSGYSVF 179

Query: 193 SLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
             VGER RE  +F  + +  D + K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 180 VGVGERTREGNDFYNEMINSDVINKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHD 239

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I R+  +  E++   G +P A GY +++  E+  L ERI  +    G+IT+V 
Sbjct: 240 VLLFIDNIYRYTLAGTEVSALLGRIPSAVGYQSTLSEEMGILQERI--TSTSLGSITSVQ 297

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEK 370
           +V V  D+  DP   +  S LD  IVL+R +A  G YP VDPL S S+  +      +  
Sbjct: 298 AVYVPADDLTDPSPATTFSHLDATIVLSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHY 357

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 358 NVARDVKSILQRYQELKDIIAILGMDELSEED-KLIVLRSRKIQRFLSQP 406


>gi|302747698|gb|ADL63330.1| Atp1 [Ximenia americana]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++G  V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKGSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|302747490|gb|ADL63226.1| Atp1 [Humiria balsamifera]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 19/351 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
           I DG I L   L   G  P ++   SVSR+   A     K++  S     H
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVWGSSKLEWH 348


>gi|206890586|ref|YP_002248090.1| ATP synthase F1, beta subunit [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226740687|sp|B5YI24|ATPB_THEYD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|206742524|gb|ACI21581.1| ATP synthase F1, beta subunit [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 473

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/412 (25%), Positives = 187/412 (45%), Gaps = 19/412 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ---------VIRINLDIVYICP 74
           G +  +           Q   + + +  +       G           + +  + V    
Sbjct: 4   GKVVQVIGTVVDCEFEGQLPEVLNALKIEEPGDPAKGIPELHLTLEVAMHLGENRVRTIA 63

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +G  + +  G  V   G    +       GR+IN +G+P+D    +   D    I    P
Sbjct: 64  MGSTDGLVRGMKVVDTGAPITVPVGKPVLGRIINVIGEPVDEMGPIQAQD-KYPIHISAP 122

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +    + F+TG++V D+  P   G ++G+F G+G+GK+ ++     +         
Sbjct: 123 EFTEQSPTTQQFETGVKVFDLLVPFVRGGKMGMFGGAGVGKTVIIMEMIHNIAMKHGGVS 182

Query: 191 IISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +   +      L +  +V    +E P +R    LTA+T+AEYF  +G
Sbjct: 183 VFAGVGERTREGNDLYLEMKHSGVLPQVALVYGQMNEPPGVRARIALTALTVAEYFRDQG 242

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VL+ +D+I R+  +  E++   G +P A GY  ++ +E+  L ERI  +   KG+IT+
Sbjct: 243 QDVLIFIDNIFRYTLAGSEVSALLGRMPSAVGYQPTLSTEMGALQERI--TTTAKGSITS 300

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD- 368
           + ++ V  D+  DP   +V + LDG +VL+R +AE G YP VDPL S SR+ D     D 
Sbjct: 301 MQAIYVPADDLTDPAVAAVFAHLDGTVVLSRQIAELGIYPAVDPLDSTSRILDPRVVGDE 360

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++   +  ++ R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 361 HYQVARGVQSVLQRYKELQDIIAILGIEELSEDD-KLTVARARKLQRFLSQP 411


>gi|259649496|dbj|BAI41658.1| F0F1-type ATP synthase subunit beta [Lactobacillus rhamnosus GG]
          Length = 519

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 188/418 (44%), Gaps = 14/418 (3%)

Query: 14  DYSKNLVVQGGYISSITSVYYTVTCL--SQYVCLGDFVVHQGKNSDNLGQVIRIN-LDIV 70
           +   N+    G I+ +      V          + + +    K+   L   + +   D V
Sbjct: 27  NRRTNMPNSTGKIAQVIGPVVDVAFPINDNLPEINNALTITRKDGSQLVLEVALELGDGV 86

Query: 71  -YICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
                +   + +  G  V   G    +       GRV N LG PID  ++ G       I
Sbjct: 87  MRTIAMDSTDGLQRGMAVEDTGGPISVPVGKDTLGRVFNVLGDPIDDGEAFGPDHRRDSI 146

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P   +     +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +
Sbjct: 147 HRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGGKVGLFGGAGVGKTVLIQELIHNIAEE 206

Query: 189 KVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
              IS+   VGER RE  +   +     + + + +V    +E P  R    LT +TIAEY
Sbjct: 207 HGGISVFTGVGERTREGNDLYFEMKESGVLENTAMVFGQMNEPPGARMRVALTGLTIAEY 266

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +
Sbjct: 267 FRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGQLQERI--TSTK 324

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL-ASVSRLAD 362
           KG++T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPL +S S L  
Sbjct: 325 KGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERRLTEQGIYPAVDPLESSSSALTP 384

Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +    +  K+ + +  ++ R+ E +DI  I G     D      V +   +  FL Q+
Sbjct: 385 EIVGEEHYKVATEVQQVLQRYRELQDIISILGMDELSDEE-KVIVARARRVQFFLSQN 441


>gi|302747622|gb|ADL63292.1| Atp1 [Rivina humilis]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDLSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|163784733|ref|ZP_02179542.1| hypothetical protein HG1285_01231 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879998|gb|EDP73693.1| hypothetical protein HG1285_01231 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 477

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/363 (28%), Positives = 174/363 (47%), Gaps = 13/363 (3%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V     G  + +  G  V    G  +I       GR+ N +G+PID    + + +
Sbjct: 58  LGEKRVRTIAYGPTDGLVRGQEVESIGGPLQIPVGKAVLGRIFNVVGQPIDDAGPV-EAE 116

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    +    + F+TGI+VID+  P   G ++G+F G+G+GK+ L+     
Sbjct: 117 EKWPIFRPAPSFEEQSTKVEIFETGIKVIDLLVPFIKGGKVGLFGGAGVGKTVLMQELIH 176

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAV 239
           +         ++  VGER RE  +   +     +   + +V    +E P +R     T +
Sbjct: 177 NIAKFHSGYSVVVGVGERTREGNDLWMEMKESGVLPYTAMVYGQMNEPPGVRFRVAQTGL 236

Query: 240 TIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           T+AEYF   +  +VL+ +D+I RF  +  E++T  G LP A GY  ++ +++  + ERI 
Sbjct: 237 TMAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGRLPSAVGYQPTLGTDVGEVQERIA 296

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
                 G+IT++ +V V  D+  DP   S+ + LD  IVL R LAE G YP +DPL S S
Sbjct: 297 --STVNGSITSIQAVYVPADDITDPAPASIFAHLDATIVLQRRLAELGIYPAIDPLESTS 354

Query: 359 R-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDF 416
           + LA +    +   +   +  ++ R++E ++I  I G     +   DKA V +   +  F
Sbjct: 355 KALAPEYVGEEHYYVAREVQRILQRYKELQEIIAILGMEELSEE--DKALVGRARRLQRF 412

Query: 417 LKQ 419
           L Q
Sbjct: 413 LAQ 415


>gi|3676296|gb|AAD03392.1| mitochondrial ATPase beta subunit [Nicotiana sylvestris]
          Length = 556

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/415 (24%), Positives = 178/415 (42%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + +Q +    + Q +    ++V    +   E 
Sbjct: 86  GKVCQVIGAVVDVRFDEGLPPILTALEVLDNQIRLVLEVAQHLG--ENMVRTIAMDGTEG 143

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+PID    +   D  + I  + P  + + 
Sbjct: 144 LVRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDERGDIN-TDHFLPIHREAPAFVEQA 202

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        S+    G
Sbjct: 203 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFPGVG 262

Query: 200 REVRE---FIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
               E      + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 263 EPSAEGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 322

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 323 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 380

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 381 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHIL 440

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 441 GEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KMTVARARKIQRFLSQP 494


>gi|85710182|ref|ZP_01041247.1| FliI, Flagellum-specific ATPase [Erythrobacter sp. NAP1]
 gi|85688892|gb|EAQ28896.1| FliI, Flagellum-specific ATPase [Erythrobacter sp. NAP1]
          Length = 450

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 147/419 (35%), Positives = 219/419 (52%), Gaps = 6/419 (1%)

Query: 7   TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRI 65
            LA+      +   V  G + +       V+ LS  V +G     +  + D  L +VI  
Sbjct: 8   ELARFRGAAIERGPVPSGRVVACDGGLIEVSGLS--VPIGSLGAIESDSGDEPLAEVIGF 65

Query: 66  NLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL 124
                 +  +G  + +     V   G    +       GR ++ LG+PIDG  ++   + 
Sbjct: 66  RRGHSLMMLLGDAQLLQPRASVRAIGSPGSVRVGDALLGRAVDGLGQPIDGGPAIHASE- 124

Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184
           +  ++ K   A+ R  V + F  G+R ++    +  GQR+G+ AGSG+GKS L+   A +
Sbjct: 125 TWPLLGKRESALARSGVSESFDCGVRAVNALATMGVGQRMGIIAGSGVGKSVLIDTVAAN 184

Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
              D  +I+L+GER REV +F+     G    + VVV   +D +P LR  A   A  IAE
Sbjct: 185 AKADLAVIALIGERAREVSDFVTRHMSGAERGRMVVVAVPADHAPNLRLRAAQYASAIAE 244

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           +F +KG  VLL+LDS+TR AH+ RE+A   GE   ARGYP S  S + RL+ER G     
Sbjct: 245 HFRAKGRKVLLVLDSLTRVAHAARELALVLGEPGAARGYPPSALSTITRLVERAGNCATS 304

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G +T + SVL DGD+ +DP+ D+ R+ILDGH+VL+R LA+ G YP +D  AS+SR+   
Sbjct: 305 GGAVTGIYSVLADGDDTSDPVVDTARAILDGHLVLSRELAQRGHYPAIDIPASLSRVMHD 364

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
             SA++ +    L  LI   E  RD+ ++G YR G D  LD A+     I  FL+Q  +
Sbjct: 365 IASAEQLEAARRLRALIAAREHNRDLVMMGAYRAGSDPDLDCALAHSNAIDAFLQQPRN 423


>gi|323699973|ref|ZP_08111885.1| ATP synthase F1, beta subunit [Desulfovibrio sp. ND132]
 gi|323459905|gb|EGB15770.1| ATP synthase F1, beta subunit [Desulfovibrio desulfuricans ND132]
          Length = 465

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 187/413 (45%), Gaps = 17/413 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNS----DNLGQV-IRINLDIVYICP 74
              G I  +      V      +  +   +  +  N+    D + +V   +  ++V    
Sbjct: 2   ANTGKIVQVIGAVVDVEFAEGNLPNILSALEIKNPNNTDAPDLVCEVAQHLGNNVVRTIA 61

Query: 75  VGIGEEISLGDL-VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  G   V       +       GR++N +GKP+D    +   +  + I    P
Sbjct: 62  MDATEGLVRGMAAVDTESPITVPVGTGSLGRIMNVVGKPVDELGEV-PCEKRLPIHRAAP 120

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--- 190
               +    +  +TGI+V+D+  P   G ++G+F G+G+GK+ +L     +         
Sbjct: 121 AFTEQSTKVELLETGIKVVDLLIPFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGIS 180

Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           + + VGER RE  +   +     + +K+ +V    +E P  R    LTA+T AEYF  + 
Sbjct: 181 VFAGVGERTREGNDLYHEMKEAGVLEKAALVYGQMNEPPGARARVALTALTCAEYFRDEE 240

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT
Sbjct: 241 GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGGLQERI--TSTNKGSIT 298

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V +V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S SR+       A
Sbjct: 299 SVQAVYVPADDLTDPAPATTFAHLDGTLVLSRQIAELGIYPAVDPLDSTSRILSPDVLGA 358

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +       +  ++ ++++ +DI  I G     D      V +   +  FL Q 
Sbjct: 359 EHYNTAREVQSVLQKYKDLQDIIAILGMDELSDDD-KLTVARARRVQRFLSQP 410


>gi|302747620|gb|ADL63291.1| Atp1 [Rhabdodendron amazonicum]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LLIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|254523895|ref|ZP_05135950.1| flagellar protein export ATPase FliI [Stenotrophomonas sp. SKA14]
 gi|219721486|gb|EED40011.1| flagellar protein export ATPase FliI [Stenotrophomonas sp. SKA14]
          Length = 465

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 142/411 (34%), Positives = 224/411 (54%), Gaps = 4/411 (0%)

Query: 30  TSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF 88
            +V  T+  +     LG     +  +   +  +V+    +  Y+ P      +     V 
Sbjct: 51  RAVGLTLEAVGCEAPLGASCKVEVVDGGWVDAEVVGFASERTYLMPSAELHGLLPNARVV 110

Query: 89  HW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147
               R  +       GRVI++ G P+DG   + + +  + +       + R+ + +    
Sbjct: 111 PSARRGGVEVGEGLLGRVIDSDGVPLDGKGPI-RAEGHVGMAGVSINPLAREPITQPLDV 169

Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI- 206
           G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D +++ L+GERGREVR+F+ 
Sbjct: 170 GVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVE 229

Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266
                + L+++VVV + +D  P+ R      A  IAE+F  +G NVLL++DS+TRFA + 
Sbjct: 230 TTLGEEGLRRAVVVASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQ 289

Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326
           REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA  +VL +GD+  DPIAD
Sbjct: 290 REIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIAD 349

Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386
           + R+ILDGHI+L+R +A+ G YP +D  +SVSR+  +      +  +  L  L+  +   
Sbjct: 350 AARAILDGHILLSRRVADSGLYPAIDVESSVSRVVTEIADEPWRLRIRKLKRLVSAYSAN 409

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
           RD+  IG Y+ G D   D+A+ + P I +FL Q  +  +     Q   ++L
Sbjct: 410 RDLIAIGAYQRGNDAATDEALERWPEIMEFLGQDVAKAADLPHSQAALQRL 460


>gi|119350469|gb|ABL63185.1| AtpB [Pseudochlorella sp. CCAP 211/1A]
          Length = 392

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +   +  + I
Sbjct: 5   VRAVSMNATDGLMRGMDVVDTGKPLTVPVGPATLGRIFNVLGEPVDNLGPVDAKEG-LPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPLFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVINEDNISESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEEHYECAQNVKETLQRYKELQDIIAILGLDELSEED-RLVVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|256850901|ref|ZP_05556290.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260661115|ref|ZP_05862029.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 115-3-CHN]
 gi|256615963|gb|EEU21151.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260548052|gb|EEX24028.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 115-3-CHN]
          Length = 480

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 177/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V +  +     +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDETITLEVTLELGDGVLRTISMESTDGLRRGMKVVDTGAPISVPVGDDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG PID             I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KMIVARARKIQFFLSQN 408


>gi|119350529|gb|ABL63215.1| AtpB [Planctonema lauterbornii]
          Length = 393

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/363 (28%), Positives = 164/363 (45%), Gaps = 18/363 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G    +       GR+ N LG+P+D    +G  + S+ I
Sbjct: 5   VRAVSMSATDGLMRGMEVIDTGNPLTVPVGQATLGRIFNVLGEPVDNLGPVGNKE-SLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVINEENLSESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        D       +   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEDHYNCAQLVKETLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLK 418
           FL 
Sbjct: 361 FLS 363


>gi|116750008|ref|YP_846695.1| F0F1 ATP synthase subunit beta [Syntrophobacter fumaroxidans MPOB]
 gi|166222421|sp|A0LLF8|ATPB_SYNFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116699072|gb|ABK18260.1| ATP synthase F1, beta subunit [Syntrophobacter fumaroxidans MPOB]
          Length = 469

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 116/427 (27%), Positives = 189/427 (44%), Gaps = 21/427 (4%)

Query: 24  GYISSITSVYYTVT---CLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           G I  +      V         +    FV + G N      V+     +  ++V    + 
Sbjct: 4   GKIVQVIGNVVDVEFGEGKLPPLLTALFVSNPGLNDQEDNLVLEVAQHLGDNVVRTIGMD 63

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
           + + +  G  V   G    +   A   GRVIN +G+ +DG   +   D  M I    P  
Sbjct: 64  LTDGLVRGMPVKDTGNPIMMPVGAAVLGRVINVVGRTVDGLGPVN-TDTYMPIHRTAPAF 122

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
             +    K  +TG++VID+  P   G ++G+F G+G+GK+ ++     +         + 
Sbjct: 123 TEQDTSVKVLETGVKVIDLLVPFPRGGKMGMFGGAGVGKTVVMMEMIHNIAMQHGGISVF 182

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
           + VGER RE  +   +     +  ++ +V     E P  R    L+A+T+AEYF      
Sbjct: 183 AGVGERTREGNDLYHEMKDSGVLPRAGLVYGQMTEPPGARARVALSALTVAEYFRDVEGQ 242

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +   KG+IT+V
Sbjct: 243 DVLLFVDNIFRFTQAGAEVSALLGRMPSAVGYQPTLGTDLGELQERI--TSTTKGSITSV 300

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADE 369
             V V  D+  DP   +  + LDG +VL+R +AE G YP VDPL S SR+ D      D 
Sbjct: 301 QCVYVPADDLTDPAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTSRILDPNVLGEDH 360

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
                 +  ++ ++++ +DI  I G     D      V +   I  FL Q        + 
Sbjct: 361 YYTAREVQQILQKYKDLQDIIAILGMDELSDED-KLTVARARKIQRFLSQP---FHVAET 416

Query: 430 FQEITKK 436
           F  +  K
Sbjct: 417 FTGVAGK 423


>gi|315038012|ref|YP_004031580.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1112]
 gi|325956465|ref|YP_004291877.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus 30SC]
 gi|312276145|gb|ADQ58785.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1112]
 gi|325333030|gb|ADZ06938.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus 30SC]
 gi|327183292|gb|AEA31739.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1118]
          Length = 479

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 183/379 (48%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V + ++   + +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSEDESIVLEVTLELGDGVLRTIAMESTDGLRRGMKVEDTGAPISVPVGEDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHILQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   +  FL Q+
Sbjct: 391 E-KLIVARARKVQFFLSQN 408


>gi|302747522|gb|ADL63242.1| Atp1 [Linnaea borealis]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIAVNLENENVEIVVFGSDTAIKEGDLVKRTGSIVDVPAGKGMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKIMKQVCGSSKLELAQ 349


>gi|302747352|gb|ADL63157.1| Atp1 [Basella alba]
          Length = 349

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|305432648|ref|ZP_07401809.1| ATP synthase F1 sector beta subunit [Campylobacter coli JV20]
 gi|304444359|gb|EFM37011.1| ATP synthase F1 sector beta subunit [Campylobacter coli JV20]
          Length = 465

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 113/409 (27%), Positives = 190/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKQKLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N  G  ID  + +   D    I    P   +
Sbjct: 63  DGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEVAF-DKKWAIHRDPPAFED 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D+  P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNRS+AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLIVERARKIEKFLSQP 407


>gi|171321204|ref|ZP_02910174.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
 gi|171093514|gb|EDT38684.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5]
          Length = 443

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 146/426 (34%), Positives = 233/426 (54%), Gaps = 7/426 (1%)

Query: 17  KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYICPV 75
            + V + G ++ I   +           LG      G+ S+  L +++ +    V + P 
Sbjct: 18  TDPVRRTGVVTRIMPTFVEADG--PGAPLGSLCAIGGEQSEPTLAEIVNVERTRVTLAPY 75

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
                I +GD V        I     + GRV++ LG+P+DG  +LG    +  +     P
Sbjct: 76  STASAIRIGDEVAALQADATIPVGDAYLGRVVDPLGRPLDGAGALGHCVANWPLAGIATP 135

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
            + RQ  E   +TG+R +D    L  GQR+G+FAGSG+GK+TLL   AR    D  ++ L
Sbjct: 136 PLERQSPEHVLETGVRALDALLTLGVGQRVGLFAGSGVGKTTLLGALARDVYADVRVLCL 195

Query: 195 VGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGERGREV E         +  ++ +VVATSD+S  LR  +   A++IAEYF S+G +VL
Sbjct: 196 VGERGREVEECWNRTLSAASRARTTLVVATSDQSAALRARSVPAALSIAEYFRSQGAHVL 255

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L++DS+TR+A ++REI   +GE P  R Y   VF+ LP+++ER G   K  G ITA+++V
Sbjct: 256 LMIDSVTRYALALREIGLAAGEPPTVRAYTPGVFAALPKIVERCGAL-KSGGAITALMTV 314

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373
           L + D+ +DP+A+++RS+LDGHIVL+R+LAE+G++PP+    SVSR++    +  E+ L 
Sbjct: 315 LTESDDIDDPMAETMRSLLDGHIVLSRALAEQGQFPPIQVPKSVSRVSRYVANDAERALA 374

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQE 432
           +     +  ++ ++ +   G Y  G    LD+A+   P +  FL+Q     +  E     
Sbjct: 375 ADAIAQLALYDASKTLVESGLYTAGSHPALDRALRLRPALLSFLRQDAESPTGREQAIAM 434

Query: 433 ITKKLQ 438
           +   L+
Sbjct: 435 LASLLE 440


>gi|149798669|gb|ABR32025.1| ATP synthase beta chain [Cheilanthes eatonii]
          Length = 426

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S ++       +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMSQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|302747552|gb|ADL63257.1| Atp1 [Myrtus communis]
          Length = 344

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 89/347 (25%), Positives = 148/347 (42%), Gaps = 19/347 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAILGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ MAP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFMAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           I DG I L   L   G  P ++   SVSR+   A     K++  SL 
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLK 344


>gi|317052409|ref|YP_004113525.1| ATP synthase F1 subunit beta [Desulfurispirillum indicum S5]
 gi|316947493|gb|ADU66969.1| ATP synthase F1, beta subunit [Desulfurispirillum indicum S5]
          Length = 466

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/408 (25%), Positives = 194/408 (47%), Gaps = 12/408 (2%)

Query: 21  VQGGYISSI-TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR-INLDIVYICPVGIG 78
           +  G I+ +   V        +   + + +  Q ++   + +V + +   +V    +   
Sbjct: 1   MNTGKITQVIGPVVDFAFDADKIPAVYNALEIQLQDRKLVLEVQQHLGEGMVRAVAMDST 60

Query: 79  EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G+   +       GR++N +G+P+D  + +   +    I  + P  ++
Sbjct: 61  DGLVRGMDGIDTGKPIAVPVGKATLGRILNVIGEPVDEGEPVNAEEY-WSIHREAPSFVD 119

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +       +TGI+V+D+  P   G +IG+F G+G+GK+ L+    R+   +     + + 
Sbjct: 120 QDTQSTMLETGIKVVDLLCPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFAG 179

Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253
           VGER RE  +   +      + K+ +V    +E P  R    L+ +TIAE F   G +VL
Sbjct: 180 VGERTREGNDLYHEMKDSGVIDKAALVYGQMNEPPGARMRVALSGLTIAENFREDGLDVL 239

Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313
           L +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V
Sbjct: 240 LFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGNLQERI--TSTKTGSITSVQAV 297

Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKL 372
            V  D+  DP   +  + LD   VLNRS+AE G YP VDPL S SR+ +      D   +
Sbjct: 298 YVPADDLTDPAPATTFAHLDATTVLNRSIAELGIYPAVDPLDSTSRILEPGVVGQDHYHV 357

Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++ +++ R++  +DI  I G     +      V++   +  FL Q 
Sbjct: 358 ARAVQNILQRYKALQDIIAILGMDELSEDD-KLIVNRARKVQRFLSQP 404


>gi|29726140|gb|AAD00596.2| ATP synthase beta subunit [Romneya coulteri]
          Length = 488

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/420 (25%), Positives = 181/420 (43%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G ++ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 11  GRVAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQQINVTCEVQQLLGNNRVRAVA 68

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N  G+P+D    +     S  I    P
Sbjct: 69  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVXGEPVDNLGPVDTRXXS-PIDRSAP 127

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 128 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 187

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 188 VFGGVGERTREGNDLYMEMKESGVINEQNIADSKVALVYGQMNEPPGARMRVGLTALTMA 247

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 248 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 305

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+   P   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 306 TKEGSITSIQAVCVPADDLTXPAPATTFAHLDAXXVLSRGLAAKGIYPAVDPLDSTSTML 365

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  ++   +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 QPRIVGEEHYEIAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 424


>gi|8517669|emb|CAB94385.1| ATP synthase beta subunit [Tsuga canadensis]
          Length = 468

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLD-IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G  V        +       GR+ N LG
Sbjct: 30  GQEIQVTCEVQQLLGNHKVRAVAMSATDGLTRGMRVIDTRAPLSVPVGGSTLGRIFNVLG 89

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 90  EPVDNLGPVY-ARTTSPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 148

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 149 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNISESKVAL 208

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 209 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 268

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  +  D   V 
Sbjct: 269 AVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHSDATTVP 326

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  ++   +   + R++E +DI  I G   
Sbjct: 327 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYEIAQGVKQTLQRYKELQDIIAIPGLDE 386

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 387 LSEDD-RLIVARARKIERFLSQP 408


>gi|315123709|ref|YP_004065713.1| ATP synthase subunit B [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017431|gb|ADT65524.1| ATP synthase subunit B [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 465

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 189/409 (46%), Gaps = 16/409 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVH----QGKNSDNLGQVIRINLDI-VYICPVGIG 78
           G+IS +      V        + + +V     +GK    + +V     D  V    + + 
Sbjct: 3   GFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEVAAHLGDNRVRTIAMDMT 62

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           + +  G      G    +       GR+ N  G  ID  + +   D    I    P   +
Sbjct: 63  DGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISF-DKKWAIHRDPPAFED 121

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +    + F+TGI+V+D   P   G ++G+F G+G+GK+ ++     +  F      + + 
Sbjct: 122 QSTKSEIFETGIKVVDFLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAG 181

Query: 195 VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252
           VGER RE  +   +    N+  K  +     +E P  R    LT +T+AEYF  +   +V
Sbjct: 182 VGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDV 241

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           L+ +D+I RF+ S  E++   G +P A GY  ++ SE+ +  ERI  +  +KG+IT+V +
Sbjct: 242 LMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQA 299

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKK 371
           V V  D+  DP   +V + LD   VLNR++AE+G YP VDPL S SR+ D      +  K
Sbjct: 300 VYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYK 359

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +  ++ ++++ +DI  I G     +      V +   I  FL Q 
Sbjct: 360 VARGVQSVLQKYKDLQDIIAILGMDELSEED-KLVVERARKIEKFLSQP 407


>gi|190358726|sp|A8F2U0|ATPB_RICM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 473

 Score =  267 bits (683), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 20/420 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +KN+      IS++  V +T       + L     +  K    L     I  D V    +
Sbjct: 2   AKNIGKITQIISAVVDVKFTNNGELPEI-LNALECYNDKQRIVLEVAQHIGDDTVRCIAM 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   RI       GR++N +G+PIDG   +   ++S  I    P 
Sbjct: 61  DSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNIS-SIYKPAPD 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             N+        TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 120 FTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTV 179

Query: 192 ISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +   + +             K  +V    +E P  R    L+ +TIAE
Sbjct: 180 FAGVGERTREGNDLYHEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAE 239

Query: 244 --YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 240 SFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ 
Sbjct: 298 TKYGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVL 357

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D     +E   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 DPMIVGEEHYSVARQVQQVLQTYKSLQDIIAILGMDELSEED-KLTVVRARKIQRFLSQP 416


>gi|302747388|gb|ADL63175.1| Atp1 [Celtis yunnanensis]
          Length = 344

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 148/347 (42%), Gaps = 19/347 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
           I DG I L   L   G  P ++   SVSR+   A     K++  SL 
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSLK 344


>gi|119350561|gb|ABL63231.1| AtpB [Treubaria setigera]
          Length = 392

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 160/365 (43%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G  V   G+   +       GR+ N LG+P+D    +   + ++ I
Sbjct: 5   VRAVAMNPTEGLMRGMEVLDTGKPLSVPVGKITLGRIFNVLGEPVDNMGPVETKE-TLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
             + P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +                                   LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYTEMKESGVIVEKXXXXXXXXXXXXXXXXXXXXXXRVALT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       +   +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEKHYETAQNVKQTLQRYKELQDIIAILGLDELSEED-RLVVSRARRIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|525291|emb|CAA52636.1| ATP synthase beta subunit [Triticum aestivum]
          Length = 553

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/415 (25%), Positives = 182/415 (43%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + +  +    + Q +    ++V    +   E 
Sbjct: 84  GQVCQVIGAVVDVRFDEGLPPILTALEVLDNSIRLVLEVAQHLG--ENVVRTIAMDGTEG 141

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+PID    +   D  + I  + P  + + 
Sbjct: 142 LVRGQKVLNTGSPITVPVGRATLGRIINVIGEPIDHKGDIKTHDF-LPIHREAPAFVEQA 200

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 201 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 260

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 261 ERTREGNDLYREMIESGVIKLDEKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 320

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 321 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 378

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 379 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVL 438

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 439 GVDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KMTVARARKIQKFLSQP 492


>gi|118573692|sp|Q38WK5|ATPB_LACSS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 476

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 114/412 (27%), Positives = 190/412 (46%), Gaps = 16/412 (3%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSDNLGQV-IRINLDIVYICPV 75
           +  G +  +      V   S    L D      V +G +   + +V + +   ++    +
Sbjct: 1   MSMGKVVQVIGPVVDVE-FSLDTDLPDINNALTVDKGNDETVVLEVALELGDGVMRTISM 59

Query: 76  GIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              + +  G  V   GR   +       GRV N LG+ IDG +          I    P 
Sbjct: 60  ESTDGLRRGMPVEDAGRAINVPVGKETLGRVFNVLGETIDGGEEFPADFRRDSIHRSAPK 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194
                   +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   IS+
Sbjct: 120 FEELNTSSEILETGIKVIDLLAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISV 179

Query: 195 ---VGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG- 249
              VGER RE  +   +     + +K+ +V    +ESP  R    LT +TIAEYF     
Sbjct: 180 FTGVGERTREGNDLYFEMKESGVLEKTAMVFGQMNESPGARMRVALTGLTIAEYFRDVEG 239

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++T+
Sbjct: 240 QDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTS 297

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-D 368
           + ++ V  D++ DP   +  + LD    L+R L ++G YP V+PL S S   D      +
Sbjct: 298 IQAIYVPADDYTDPAPATTFAHLDATTNLDRKLTQQGIYPAVNPLESSSSALDPEIVGQE 357

Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             ++ S + H++ R+ E +DI  I G     D      V +   I  FL Q+
Sbjct: 358 HYEVASEVQHVLQRYRELQDIISILGMDELSDDE-KIIVARARRIQFFLSQN 408


>gi|34539417|gb|AAQ74592.1| F1-ATPase alpha subunit [Pontederia cordata]
          Length = 373

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 83/361 (22%), Positives = 149/361 (41%), Gaps = 19/361 (5%)

Query: 76  GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
           G    I  GDLV   G     P      GRV++ALG PIDG  +L   +    +  K P 
Sbjct: 1   GSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHE-RRRVEVKAPG 59

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------ 188
            + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +          
Sbjct: 60  IIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDTILNQKQMNSRGTS 119

Query: 189 -----KVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242
                  +   +G++   V + ++     N  + S++V AT+ +   L+ +AP +   + 
Sbjct: 120 SSETLYCVYVAIGQKRSTVAQLVQILPEANALEYSILVAATASDPAPLQFLAPYSGCAMG 179

Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302
           EYF   G + L+I D +++ A + R+++      P    +P  VF    RLLER      
Sbjct: 180 EYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSD 239

Query: 303 E--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360
           +   G+ TA+  +     + +  I  +V  I DG I     L   G  P ++   SVSR+
Sbjct: 240 QTGAGSSTALPVIETQAGDVSAYIPTNVIPITDGQICSETELFYRGIRPAINVGLSVSRV 299

Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
              A     K++  S    + ++ E   +     +   +D      +++   + +  KQ 
Sbjct: 300 GSAAQLRAMKQVRGSSKLELAQYRE---VAAFAQFGSDLDAATQALLNRGARLTEVPKQP 356

Query: 421 P 421
            
Sbjct: 357 Q 357


>gi|1703718|sp|P50003|ATPB_PRODI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|150558|gb|AAA25556.1| ATP synthase beta subunit [Prochloron didemni]
          Length = 483

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 188/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I+ I          S  +  + + +  +GKN+         +V ++  D  V    + 
Sbjct: 11  GKITQIIGPVVDAEFPSGKMPRIYNALRVEGKNAAGQDVAVTCEVQQLLGDNQVRAVSMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  +   G    +       GR+ N LG+P+D    +   + S  I    P  
Sbjct: 71  STDGLVRGMEITDTGAPINVPVGKATLGRIFNILGEPVDNQGPVYTAETS-PIHRAAPKF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
            +       F+TGI+VID+ TP   G +IG+F G+G+GK+ ++     +   +   +S+ 
Sbjct: 130 TDLDTKPTVFETGIKVIDLLTPYRRGGKIGLFGGAGVGKTVIMMELINNIAINHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   + +          N  K  +V    +E P  R    L+A+T+AEY
Sbjct: 190 GGVGERTREGNDLYNEMIESKVINADNLNESKIALVYGQMNEPPGARMRVGLSALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  +
Sbjct: 250 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LDG  VL+R LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQA 367

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                D      ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 368 GIVGEDHYNTARAVQSTLQRYKELQDIIAILGLDELSEED-RLIVDRARKVERFLSQP 424


>gi|302747692|gb|ADL63327.1| Atp1 [Viburnum sp. Qiu 95083]
          Length = 349

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 84/352 (23%), Positives = 146/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ LG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDGLGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|194476695|ref|YP_002048874.1| ATP synthase subunit B [Paulinella chromatophora]
 gi|171191702|gb|ACB42664.1| ATP synthase subunit B [Paulinella chromatophora]
          Length = 488

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G +  +      V   +  +  + + +   GKNS         +V ++  D  V    + 
Sbjct: 13  GIVRQVIGPVLDVEFPAGKLPKIYNALRVAGKNSAGQNVALTAEVQQLLGDHRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  STDGLVRGMEAMDTGAPIAVPVGEATLGRIFNVLGEPVDEQGPVNTT-TTAPIHRAAPKL 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
              Q   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 132 TELQTKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 192 GGVGERTREGNDLYEEFKESGVINSKDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++ +L ERI  +   
Sbjct: 252 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTL 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   D   +   ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 370 SIVGDEHYRTARAVQANLQRYKELQDIIAILGLDELSEAD-RLTVDRARKIEKFLSQP 426


>gi|15893158|ref|NP_360872.1| F0F1 ATP synthase subunit beta [Rickettsia conorii str. Malish 7]
 gi|15620369|gb|AAL03773.1| ATP synthase beta chain [Rickettsia conorii str. Malish 7]
          Length = 499

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 113/428 (26%), Positives = 187/428 (43%), Gaps = 20/428 (4%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
                +  +KN+      IS++  V +T       + L     +  K    L     I  
Sbjct: 20  FLTKEKIMTKNIGKITQIISAVVDVKFTNNGELPKI-LNALECYNDKQRIVLEVAQHIGD 78

Query: 68  DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D V    +   E +  G  V   G   RI       GR++N +G+PIDG   +   ++S 
Sbjct: 79  DTVRCIAMDSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNIS- 137

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            I    P   ++        TGI+VID+  P   G +IG+F G+G+GK+ L+     +  
Sbjct: 138 SIYKPAPDFTHQSTECNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVA 197

Query: 187 FDKV---IISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAP 235
                  + + VGER RE  +   + +             K  +V    +E P  R    
Sbjct: 198 KAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVA 257

Query: 236 LTAVTIAE--YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293
           L+ +TIAE     ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L
Sbjct: 258 LSGLTIAESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGEL 317

Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
            ERI  +  + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDP
Sbjct: 318 QERI--TSTKYGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDP 375

Query: 354 LASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412
           L S S++ D     +E   +   +  ++  ++  +DI  I G     +      V +   
Sbjct: 376 LDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKSLQDIITILGMDELSEED-KLTVARARK 434

Query: 413 IYDFLKQS 420
           I  FL Q 
Sbjct: 435 IQRFLSQP 442


>gi|126460779|ref|YP_001041893.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17029]
 gi|126102443|gb|ABN75121.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17029]
          Length = 436

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 167/414 (40%), Positives = 242/414 (58%), Gaps = 2/414 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           LAE  +  L  + G ++ I     +V  L Q   LGD V   G      G+V+R++   V
Sbjct: 9   LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSAHEV 68

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  E +++GD V   G   I+P   W GR+++ LG+P+DG   L +G  +  + +
Sbjct: 69  TILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             P A  R+ +     TG+ V D   PL  GQRIG+FAGSG+GKS+LL+ FARS   D V
Sbjct: 128 AAPAAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I LVGERGRE+R+F E  LG   + ++VVV ATSD+SP++R+     A+ +AE+F  +G
Sbjct: 188 VIGLVGERGRELRDFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+A   GE    RG+P S    +  L ER GP  +  G+ITA
Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V SVLV G +  +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR   +A S  E
Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASTAE 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L++    L+  ++    +   G Y  G D ++D A+   P +  FL +   D
Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421


>gi|329117011|ref|ZP_08245728.1| ATP synthase F1, beta subunit [Streptococcus parauberis NCFD 2020]
 gi|326907416|gb|EGE54330.1| ATP synthase F1, beta subunit [Streptococcus parauberis NCFD 2020]
          Length = 468

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +   +V    +   + ++ G  V   GR   +       GRV N LG  ID ++   
Sbjct: 48  ALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGTETLGRVFNVLGDTIDLEEPFA 107

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+  
Sbjct: 108 ADAKREPIHKQAPAFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQE 167

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 168 LIHNIAQEHGGISVFAGVGERTREGNDLYGEMKESGVIEKTAMVFGQMNEPPGARMRVAL 227

Query: 237 TAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +TIAEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 228 TGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 287

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R L + G YP VDPLA
Sbjct: 288 RI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQIGIYPAVDPLA 345

Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR         +   + + +  ++ R+ E +DI  I G     D      V +   I 
Sbjct: 346 SSSRALSPEIVGKEHYDVATGVQRVLQRYRELQDIIAILGMDELSDEE-KTLVGRARRIQ 404

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 405 FFLSQN 410


>gi|298710991|emb|CBJ32298.1| F-type H-ATPase beta subunit [Ectocarpus siliculosus]
          Length = 508

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 181/418 (43%), Gaps = 23/418 (5%)

Query: 22  QGGYISSITSVYYTVTC---LSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
             G ++ +      V     L       +  V  G +   L     +  + V    +   
Sbjct: 34  SVGRVTQVIGAVVDVQFDKDLPPIFNALEVNVADGASRLVLEVAQHLGENTVRTIAMEAT 93

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E ++ G      G    +       GR++N +G+P+D    +        I +  P    
Sbjct: 94  EGLTRGQGCTDTGAPIMVPVGQETLGRIMNVIGEPVDERGPIN-SKAKAPIHNSAPTFEE 152

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           + + ++   TGI+V+D+  P   G +IG+F G+G+GK+ ++     +   +     + + 
Sbjct: 153 QGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAG 212

Query: 195 VGERGREVREFIEDYLGDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           VGER RE  +   + +   +           K+ +V    +E P  R    LT +TIAEY
Sbjct: 213 VGERTREGNDLYHEMIEGGVIKITEDSTKGSKATLVYGQMNEPPGARARVALTGLTIAEY 272

Query: 245 FSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 273 FRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERI--TSTN 330

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V +V V  D+  DP   +  + LD   VL+R +AE G YP VDPL S SR+ D 
Sbjct: 331 KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDP 390

Query: 364 -AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                +  +   +   L+  ++  ++I  I G     +      V +   +  F+ Q 
Sbjct: 391 RVIGDEHYETARATQKLLQDYKGLQEIIAILGMDELSEDD-KLTVARARKVQRFMSQP 447


>gi|149384703|gb|ABR25160.1| ATP synthase beta chain [Microgramma bifrons]
          Length = 426

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  +     
Sbjct: 60  ATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|302747476|gb|ADL63219.1| Atp1 [Griselinia littoralis]
 gi|302747578|gb|ADL63270.1| Atp1 [Pennantia corymbosa]
          Length = 349

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|302747350|gb|ADL63156.1| Atp1 [Barbeuia madagascariensis]
 gi|302747592|gb|ADL63277.1| Atp1 [Phytolacca sp. Qiu 94109]
 gi|302747634|gb|ADL63298.1| Atp1 [Sarcobatus vermiculatus]
 gi|302747654|gb|ADL63308.1| Atp1 [Stegnosperma halimifolium]
          Length = 349

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|258690462|gb|ACV87993.1| ATP synthase beta subunit [Haliclona sp. KJP-2009]
          Length = 427

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 106/386 (27%), Positives = 182/386 (47%), Gaps = 20/386 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G++    G   RI       GR+IN +G+PID    +G  +
Sbjct: 26  LGENVVRTVAMDGTEGLVRGEVCLDMGTPIRIPVGPKTLGRIINVIGEPIDERGPIG-SE 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P   +    ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  HFANIHAEAPDFEDMSTDQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYL-------GDNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D+  K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYHEMITSGVISLKDDSSKVALVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R+++E G YP VD
Sbjct: 265 MQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVD 322

Query: 353 PLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +   +   +  ++  ++  +DI  I G     +      V +  
Sbjct: 323 PLDSTSRIMDPNIVGQEHYSVARGVQKILQDYKSLQDIIAILGMDELSEDD-KLTVARAR 381

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL Q        +VF     KL
Sbjct: 382 KIMRFLSQP---FQVAEVFTGTEGKL 404


>gi|114421|sp|P17614|ATPBM_NICPL RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|19685|emb|CAA26620.1| ATP synthase beta subunit [Nicotiana plumbaginifolia]
          Length = 560

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/415 (25%), Positives = 182/415 (43%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + +Q +    + Q +    ++V    +   E 
Sbjct: 90  GKVCQVIGAVVDVRFDEGLPPILTALEVLDNQIRLVLEVAQHLG--ENMVRTIAMDGTEG 147

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+ ID    +   D  + I  + P  + + 
Sbjct: 148 LVRGQRVLNTGSPITVPVGRATLGRIINVIGEAIDERGPI-TTDHFLPIHREAPAFVEQA 206

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 207 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 266

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 267 ERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 326

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 327 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 384

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 385 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHIL 444

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 445 GEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KMTVARARKIQRFLSQP 498


>gi|330991787|ref|ZP_08315737.1| ATP synthase subunit beta [Gluconacetobacter sp. SXCC-1]
 gi|329761255|gb|EGG77749.1| ATP synthase subunit beta [Gluconacetobacter sp. SXCC-1]
          Length = 468

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 110/428 (25%), Positives = 181/428 (42%), Gaps = 24/428 (5%)

Query: 27  SSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGD 85
           + +      V        + + +  Q      + +V   I    V    +   + +S G 
Sbjct: 2   TQVRGAVVDVQFEGTLPHILEALHVQLNGQTLVLEVAQEIGEHEVRCIAMDTTDGLSRGV 61

Query: 86  LVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
            V   G +  +       GR++N +G+PID    +        I    P    +    + 
Sbjct: 62  EVTATGTQITVPVGPGTLGRILNVIGEPIDDRGPVQAV-GRSSIHRAAPAFDEQAAATEI 120

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
             TGI+V+D+  P   G ++G+F G+G+GK+ ++     +         + + VGER RE
Sbjct: 121 LPTGIKVVDLLCPYLKGGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTRE 180

Query: 202 VREFIEDYLGDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-D 250
             +   +     +           K  +V    +E P  R    L+ VT+AEYF      
Sbjct: 181 GNDLYYEMQDAGVIKINGESTEGSKVALVYGQMNEPPGARARVALSGVTVAEYFRDVEGQ 240

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +KG+IT+V
Sbjct: 241 DVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSV 298

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-E 369
            +V V  D+  DP   +  + LD   VLNRS+AE G YP VDPL S SR  D     D  
Sbjct: 299 QAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGDEH 358

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429
            ++   +  ++  ++  +DI  I G     +      V +   I  FL Q        +V
Sbjct: 359 YQVARDVQRILQTYKSLQDIIAILGMDELSEDD-KLIVARARRIQRFLSQP---FHVAEV 414

Query: 430 FQEITKKL 437
           F     KL
Sbjct: 415 FTGAPGKL 422


>gi|225027468|ref|ZP_03716660.1| hypothetical protein EUBHAL_01724 [Eubacterium hallii DSM 3353]
 gi|224955203|gb|EEG36412.1| hypothetical protein EUBHAL_01724 [Eubacterium hallii DSM 3353]
          Length = 465

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 13/407 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G I  +      V   +Q +  + D +  Q  +   + +V   I   +V    +   E 
Sbjct: 3   TGKIIQVLGPVVDVEFENQELPAIRDALEVQNGDKKCVMEVAQHIGNHVVRCIMLAASEG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V   G   ++       GR+ N LG+ ID  + +      M I  + P    + 
Sbjct: 63  LHRDMEVTAEGSGIKVPVGEKTLGRLFNVLGETIDDGEPIKDAP-KMVIHREPPTFEEQN 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
              +  +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +    S+   VG
Sbjct: 122 PAVEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVG 181

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLL 254
           ER RE  +   +     +  K+ +V    +E P  R     T +T+AEYF  +   +VLL
Sbjct: 182 ERSREGNDLWTEMGESGVLAKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKKQDVLL 241

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V 
Sbjct: 242 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVY 299

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++ 
Sbjct: 300 VPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEADIVGEEHYEVA 359

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   + +++E +DI  I G     D      V +   I  FL Q 
Sbjct: 360 RKVQEALQKYKELQDIIAILGMEELSDED-KTVVFRARKIQKFLSQP 405


>gi|254474795|ref|ZP_05088181.1| flagellum-specific ATP synthase [Ruegeria sp. R11]
 gi|214029038|gb|EEB69873.1| flagellum-specific ATP synthase [Ruegeria sp. R11]
          Length = 447

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 162/418 (38%), Positives = 248/418 (59%), Gaps = 4/418 (0%)

Query: 2   QKNLETLAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59
           Q  +  +  L +D  +K L    G ++ I+     V+ L     +GD +V +    D L 
Sbjct: 4   QNMISAINALTQDLANKRLSAAVGRVTEISGGAIAVSGLDGQARIGDRLVLRRGGKDPLQ 63

Query: 60  GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119
           G+V+RI+   + + P    + +++GD V        +P+  W GRVI+  G P+DG   +
Sbjct: 64  GEVMRISGREISMLPDTAPDRVAVGDPVLLHPTPEFAPADSWIGRVIDPFGAPLDGR-PM 122

Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179
            +G+ + ++M+  P A  R+ + +   TG+ V +   P+  GQR+G+FAGSG+GKSTLL+
Sbjct: 123 MRGETARDLMAAPPKAAERRPMGERLATGLAVFNTILPIVKGQRVGLFAGSGVGKSTLLA 182

Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238
             A++   D V+++L+GERGREV  F+ + LG D +K++VVV ATSD+S ++R+    +A
Sbjct: 183 TLAQNMEADVVVMALIGERGREVNHFVNEVLGPDGMKRAVVVAATSDQSALVRRRCAWSA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           + +AE+F  +G NVL + DS+TRFA + REIA  SGE P  RGYP SV   +  L ER G
Sbjct: 243 MAVAEHFRDQGKNVLFLADSVTRFAEAHREIAVASGEAPALRGYPPSVTPLITGLCERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P    +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD   SVS
Sbjct: 303 PGSDGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           R    A + +E   +  +   +  +E++  +   G Y  G D+ LD+AV   P +  F
Sbjct: 363 RSLPAAATEEENAAILDVRKYLGAYEQSEVMIRAGLYSEGNDVTLDQAVKLWPELDSF 420


>gi|42558436|gb|AAS19927.1| ATP synthase beta chain [Polypodium glycyrrhiza]
          Length = 422

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 171/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRISNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +  ++  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPV-RSSVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|227903658|ref|ZP_04021463.1| H(+)-transporting two-sector ATPase [Lactobacillus acidophilus ATCC
           4796]
 gi|227868545|gb|EEJ75966.1| H(+)-transporting two-sector ATPase [Lactobacillus acidophilus ATCC
           4796]
          Length = 479

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 184/379 (48%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V + ++   + +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSEDESIVLEVTLELGDGVLRTIAMESTDGLRRGMKVEDTGAPISVPVGEDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG  +  K      I  + P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   +  FL Q+
Sbjct: 391 E-KLIVARARKVQFFLSQN 408


>gi|113910934|gb|ABI48199.1| ATPase beta subunit [Ceratopteris sp. Qiu 97119]
          Length = 450

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/394 (27%), Positives = 174/394 (44%), Gaps = 28/394 (7%)

Query: 49  VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSA 99
           +V +GKNS   GQ I +  ++        V    +   + +  G      G    +    
Sbjct: 2   LVVKGKNSA--GQEINVTCEVQQLLGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGQ 59

Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159
              GR+ N LG+P+D    + +      I    P           F+TGI+V+D+  P  
Sbjct: 60  NTLGRISNVLGEPVDNLGPV-QNSTKFPIHRSAPTFTQLDTKLSIFETGIKVVDLLAPYR 118

Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--- 213
            G +IG+F G+G+GK+ L+     +       +S+ G   ER RE  +   +        
Sbjct: 119 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 178

Query: 214 -----LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267
                  K  +V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  
Sbjct: 179 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 238

Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327
           E++   G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +
Sbjct: 239 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 296

Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEET 386
             + LD   VL+R LA +G YP VDPL S S +        +  +    +   + R++E 
Sbjct: 297 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKEL 356

Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +DI  I G     +      V +   I  FL Q 
Sbjct: 357 QDIIAILGLDELSEED-RLTVARARKIERFLSQP 389


>gi|302747326|gb|ADL63144.1| Atp1 [Albizia julibrissin]
 gi|302747566|gb|ADL63264.1| Atp1 [Oncotheca balansae]
 gi|302747660|gb|ADL63311.1| Atp1 [Stylobasium spathulatum]
          Length = 349

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|170293997|gb|ACB13092.1| ATP synthase beta subunit [Uronema sp. CCAP384/2]
          Length = 366

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 160/349 (45%), Gaps = 17/349 (4%)

Query: 85  DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144
           D V       +       GR+ N LG+P+D    + + +  + I    P   +       
Sbjct: 4   DAVDTGKPLMVPVGKPTLGRIFNVLGEPVDNLGPV-ETEQKLPIHRPAPAFTDLDTRLAI 62

Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201
           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER RE
Sbjct: 63  FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTRE 122

Query: 202 VREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252
             +   +               K  +V    +E P  R    LTA+T+AEYF      +V
Sbjct: 123 GNDLYMEMKESGVIVESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDV 182

Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312
           LL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT++ +
Sbjct: 183 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQA 240

Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK- 371
           V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +       DE   
Sbjct: 241 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYG 300

Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           +   +   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 301 IAQKVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIERFLSQP 348


>gi|290745867|gb|ADD51603.1| ATP synthase beta chain [Lellingeria suspensa]
          Length = 403

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 22  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 81

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 82  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 140

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 141 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 200

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 201 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 260

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 261 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 318

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 319 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 378

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 379 LSEED-RLTVARARKIERFLSQP 400


>gi|258517234|ref|YP_003193456.1| F0F1 ATP synthase subunit beta [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780939|gb|ACV64833.1| ATP synthase F1, beta subunit [Desulfotomaculum acetoxidans DSM
           771]
          Length = 474

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 113/415 (27%), Positives = 191/415 (46%), Gaps = 22/415 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSD----------NLGQVIRINLDIVYI 72
           G + +I  V   +     Q   + + V   GK+ +           L     +  + V  
Sbjct: 4   GRLVTIIGVVVDIEFPPGQVPEIYNAVKILGKDQEGSILPEDYDLTLEVAQHLGNNQVRT 63

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G      G+   +       GR++  LG+PIDG   +   D  + I   
Sbjct: 64  VAMSSTDGLVRGMKAVDTGKPIAVPVGRKVLGRMMGVLGQPIDGKGPIV-SDEYLPIHRP 122

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  +++    +  +TGI+VID+ TP   G +IG+F G+G+GK+ ++     +       
Sbjct: 123 APKLVDQSTRAEMLETGIKVIDLMTPFLKGGKIGLFGGAGVGKTVIVMELINNIAKQHGG 182

Query: 191 --IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
             + S VGER RE  +   + L   +  K+++V    +E P  R    LT +T+AE F  
Sbjct: 183 ISVFSGVGERTREGNDLYHEMLESGVLDKTILVFGQMNEPPGARLRVGLTGLTMAECFRD 242

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG+
Sbjct: 243 NEGADVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGS 300

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           +T+V ++ V  D+  DP   +  + LD  +VL+R +AE G YP VDPL S SR+ D    
Sbjct: 301 VTSVQAIYVPADDLTDPAPANAFAHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPNVL 360

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            A+       +  ++ R++E +DI  I G     D      V +   +  FL Q 
Sbjct: 361 GAEHYNCSRGVQAVLQRYKELQDIIAILGMDELSDED-KLIVVRARKLQRFLSQP 414


>gi|227877281|ref|ZP_03995354.1| H(+)-transporting two-sector ATPase [Lactobacillus crispatus
           JV-V01]
 gi|256842844|ref|ZP_05548332.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256848792|ref|ZP_05554226.1| F0F1 ATP synthase subunit beta [Lactobacillus crispatus MV-1A-US]
 gi|262045810|ref|ZP_06018774.1| ATP synthase F1, beta subunit [Lactobacillus crispatus MV-3A-US]
 gi|293381679|ref|ZP_06627660.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 214-1]
 gi|295692633|ref|YP_003601243.1| ATP synthase subunit beta [Lactobacillus crispatus ST1]
 gi|312977636|ref|ZP_07789383.1| ATP synthase F1, beta subunit [Lactobacillus crispatus CTV-05]
 gi|227863137|gb|EEJ70583.1| H(+)-transporting two-sector ATPase [Lactobacillus crispatus
           JV-V01]
 gi|256614264|gb|EEU19465.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 125-2-CHN]
 gi|256714331|gb|EEU29318.1| F0F1 ATP synthase subunit beta [Lactobacillus crispatus MV-1A-US]
 gi|260573769|gb|EEX30325.1| ATP synthase F1, beta subunit [Lactobacillus crispatus MV-3A-US]
 gi|290921726|gb|EFD98747.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 214-1]
 gi|295030739|emb|CBL50218.1| ATP synthase subunit beta [Lactobacillus crispatus ST1]
 gi|310895375|gb|EFQ44442.1| ATP synthase F1, beta subunit [Lactobacillus crispatus CTV-05]
          Length = 479

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 183/379 (48%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVIN 107
           V + ++   + +V + +   ++    +   + +  G  V    G   +       GRV N
Sbjct: 33  VIKSEDESIVLEVTLELGDGVLRTIAMESTDGLRRGMKVEDTGGPISVPVGEDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG     K      I  + P   +     +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPEFSKDHPREGIHKEAPKYADLTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESSSSALDPEVVGEEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   +  FL Q+
Sbjct: 391 E-KLIVARARKVQFFLSQN 408


>gi|149384709|gb|ABR25163.1| ATP synthase beta chain [Neocheiropteris palmatopedata]
          Length = 418

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 97/362 (26%), Positives = 161/362 (44%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   + +  G      G    +       GR+ N LG+P+D    + + + +  I   
Sbjct: 1   VAMSATDGLMRGMSAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSNATSPIHRS 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
            P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    +       
Sbjct: 60  APAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESINNIAKAHGG 119

Query: 192 ISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
           +S+ G   ER RE  +   +               K  +V    +E P  R     TA+T
Sbjct: 120 VSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGSTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S 
Sbjct: 238 TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTST 297

Query: 360 LADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +        +  +    +   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|46909259|gb|AAT06147.1| ATP synthase beta subunit [Modiolus americanus]
          Length = 427

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 175/369 (47%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G+     G   RI       GR+IN +G PID    +   D
Sbjct: 26  LGENTVRTIAMDGTEGLVRGESCLDTGYPIRIPVGPATLGRIINVVGDPIDERGPVN-TD 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I ++ P  +     ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  KYLSIHAEAPDFVEMSVQQEVLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D+  K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYHEMITSKVISLTDDTSKVSLVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VD
Sbjct: 265 MQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVD 322

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +   +  S+  ++  ++  +DI  I G     +      V +  
Sbjct: 323 PLDSNSRILDPYVVGEEHYAVARSIQKILQNYKSLQDIIAILGMDELSEED-KLTVARAR 381

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 382 KIQKFLSQP 390


>gi|225677296|ref|ZP_03788275.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590659|gb|EEH11907.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 475

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 166/371 (44%), Gaps = 19/371 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  +IV    +   + +S GD     G    +       GR+ N +G+ ID    L    
Sbjct: 48  IGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVPIGRSTLGRIFNVVGELIDECGPLKGKY 107

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    ++  E+   TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 108 NLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELIN 167

Query: 184 SDCFDK---VIISLVGERGREVREFIEDY--------LGDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   +               ++V+V    +E P  R 
Sbjct: 168 NIAKAHKGFSVFAGVGERTREGNDLYHEMITSNVININEHEKSQAVLVYGQMNEPPGARA 227

Query: 233 MAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+ EYF  +   +VL  +D+I RF  +  EI+   G +P A GY  ++ +++ 
Sbjct: 228 RVALTALTMTEYFRDRENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMG 287

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            + ERI       G+IT+V ++ V  D+  DP   +  S LD   VL+R +AE G YP V
Sbjct: 288 AMQERIA--STTSGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQIAEMGIYPAV 345

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQ 409
           DPL S S+         +   + S +  ++  ++  +DI  I G     D   DK +  +
Sbjct: 346 DPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDE--DKIIVDR 403

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 404 ARKIQKFLSQP 414


>gi|240145788|ref|ZP_04744389.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|257202121|gb|EEV00406.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82]
 gi|291534350|emb|CBL07462.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           M50/1]
 gi|291541181|emb|CBL14292.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis
           XB6B4]
          Length = 468

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 111/407 (27%), Positives = 184/407 (45%), Gaps = 13/407 (3%)

Query: 23  GGYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
            G I  +      V      +  + D +         + +V   I  + V    +   E 
Sbjct: 3   TGKIVQVMGPVVDVEFEDNDLPFIKDALEVDNGGKRCVMEVAQHIGNNTVRCIMLAASEG 62

Query: 81  ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +     V   G    +       GR+ N LG  +DG  +L +G+    I    P   ++ 
Sbjct: 63  LHKDMEVVATGSGITVPVGQGTLGRLFNVLGDTLDGGKTL-EGEKHWCIHRDPPSFEDQS 121

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VG 196
            V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VG
Sbjct: 122 PVVEVLETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVG 181

Query: 197 ERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254
           ER RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL
Sbjct: 182 ERSREGNDLWSEMKESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLL 241

Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314
            +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI     + G++T+V +V 
Sbjct: 242 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGSVTSVQAVY 299

Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLV 373
           V  D+  DP   +  + LD   VL+R + E+G YP VDPL S SR L +     +  +  
Sbjct: 300 VPADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETA 359

Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +  ++ ++ E +DI  I G     +      V++   I  FL Q 
Sbjct: 360 RRVQEILQKYTELQDIIAILGMEELSEED-KLVVYRARKIQKFLSQP 405


>gi|116073664|ref|ZP_01470926.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RS9916]
 gi|116068969|gb|EAU74721.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RS9916]
          Length = 486

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 188/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G +  +      V   +  +  + + +  +GKN+         +V ++  D  V    + 
Sbjct: 11  GVVRQVIGPVLDVEFPAGKLPKILNAIRIEGKNTAGEDVALTAEVQQLLGDHRVRAVAMS 70

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    + K   +  I  + P  
Sbjct: 71  GTDGLVRGMEAVDTGAAISVPVGEATLGRIFNVLGEPVDEQGPV-KATATAPIHREAPKL 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
              +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 130 TELETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 190 GGVGERTREGNDLYEEFKESGVINSEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ER+      
Sbjct: 250 FRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERVA--STL 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VLNR+LA +G YP VDPL S S +   
Sbjct: 308 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   D   +   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 AVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD-RQTVDRARKIEKFLSQP 424


>gi|222632492|gb|EEE64624.1| hypothetical protein OsJ_19476 [Oryza sativa Japonica Group]
          Length = 514

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 182/417 (43%), Gaps = 24/417 (5%)

Query: 22  QGGYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78
           +G  +  +      V     L   +   + + H  +    + Q +    ++V    +   
Sbjct: 42  RGRRVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLG--ENMVRTIAMDGT 99

Query: 79  EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137
           E +  G  V + G    +       GR++N +G+PID    +      + I  + P  + 
Sbjct: 100 EGLVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHF-LPIHREAPAFVE 158

Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISL 194
           +   ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + 
Sbjct: 159 QATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG 218

Query: 195 VGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245
           VGER RE  +   + +              K  +V    +E P  R    LT +T+AE+F
Sbjct: 219 VGERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHF 278

Query: 246 SSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304
                 +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +K
Sbjct: 279 RDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKK 336

Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK- 363
           G+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+    
Sbjct: 337 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPH 396

Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 397 VLGEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 452


>gi|42558390|gb|AAS19904.1| ATP synthase beta chain [Prosaptia obliquata]
          Length = 422

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATTSAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|28849147|dbj|BAC65129.1| adenosine triphosphatase [Acetabularia acetabulum]
          Length = 491

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQG-----KNSDNLGQVIRINLDI-VYICPVG 76
           G I+ I      V     Q   + + +V +G     +N     +V ++  D  V    + 
Sbjct: 9   GRITQIIGPVLDVEFPPGQMPNIYNALVVRGTNQAGQNVAVTCEVQQLLGDHCVRAVSMS 68

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+ +D   ++   D  + I    P  
Sbjct: 69  ATDGLMRGMEVLDTGNPLTVPVGQVTLGRIFNVLGETVDNLGTVEIKDG-LPIHRTAPAF 127

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 128 VDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 187

Query: 196 G---ERGREVREFIEDYLGD--------NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +            +  K  +V    +E P  R    LTA+T+AEY
Sbjct: 188 GGVGERTREGNDLYMEMKESRVINEANLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 247

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ SE+  L ERI  +  +
Sbjct: 248 FRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTK 305

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 306 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 365

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +E      ++   + R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 366 WIVGEEHYNCAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIERFLSQP 422


>gi|28198344|ref|NP_778658.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa Temecula1]
 gi|71901248|ref|ZP_00683348.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|182680985|ref|YP_001829145.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M23]
 gi|81839548|sp|Q87E90|ATPB_XYLFT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740693|sp|B2I877|ATPB_XYLF2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|28056414|gb|AAO28307.1| ATP synthase beta chain [Xylella fastidiosa Temecula1]
 gi|71728981|gb|EAO31112.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1]
 gi|182631095|gb|ACB91871.1| ATP synthase F1, beta subunit [Xylella fastidiosa M23]
 gi|307579453|gb|ADN63422.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 466

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 177/413 (42%), Gaps = 24/413 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGIGE 79
           G I  I      V      V      V+     D    ++     +   IV    +G  +
Sbjct: 4   GKIVQIIGAIVDVEFPRNNVP----KVYNALKIDGTAIILEVQQQLGDGIVRTIALGSTD 59

Query: 80  EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            +    +    G    +       GR+++ LG PID    +   D   EI    P   ++
Sbjct: 60  GLKRNLIATDTGHAITVPVGTGTLGRIMDVLGNPIDEAGPITYTDQ-WEIHRNAPSYEDQ 118

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLV 195
               +  +TGI+VID+  P   G ++G+F G+G+GK+  +     +         + + V
Sbjct: 119 ASTTELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGV 178

Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD---- 250
           GER RE  +F  +    N+  K  +V    +E P  R    LT +T+AEYF  + D    
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGK 238

Query: 251 --NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +    G+IT
Sbjct: 239 GKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSIT 296

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368
           ++ +V V  D+  DP   +    LD  + L+RS+A  G YP VDPL S SR  D     +
Sbjct: 297 SIQAVYVPADDLTDPSPATTFGHLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGE 356

Query: 369 EKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           E       +   + ++++ +DI  I G     +     +V +   I  F  Q 
Sbjct: 357 EHYNTTQRVQQTLQKYKDLKDIIAILGMDELSEDD-KLSVSRARKIERFFSQP 408


>gi|302747598|gb|ADL63280.1| Atp1 [Pittosporum tobira]
          Length = 349

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 146/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGILERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRSTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|146322297|sp|Q2WGJ0|ATPA_SELUN RecName: Full=ATP synthase subunit alpha, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit alpha; AltName:
           Full=F-ATPase subunit alpha
 gi|67968286|dbj|BAE00186.1| ATP synthase CF1 alpha chain [Selaginella uncinata]
          Length = 507

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 90/420 (21%), Positives = 157/420 (37%), Gaps = 14/420 (3%)

Query: 8   LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67
           L Q A+   +  V   G +  +      +      V  G+ V  +      +G  +    
Sbjct: 14  LGQTAQYDQEVGVFSTGTVLQVGDGIARIHGP-DGVTAGELVESEDG---TVGIALNSEP 69

Query: 68  DIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126
           D      +G G  I  G  V   G+  +I  S  + GRV NA  +P DG   +   +  +
Sbjct: 70  DNAGAVSMGDGSTIQEGSSVKATGKIAQIPVSDAYLGRVANAPAQPTDGKGRIAASEPRL 129

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
              S  P  ++R+ V +  +TG+   D   P   GQR  +      GK+ +      +  
Sbjct: 130 T-ESPAPGIISRRSVYEPMQTGLIATDPMIPTGRGQRELIIGDRQTGKTAVAIDTTPNQR 188

Query: 187 FDKVI--ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAE 243
              VI     +G++     + +  +        +V V  T++     + +AP T   +AE
Sbjct: 189 GQNVICVYVAIGQKASPAAQVVSTFEERGAMEYTVAVAETANPPATSQYLAPYTGAALAE 248

Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           YF  +  + L+I D  ++ A + R+++      P    +P  V    PR  ER      +
Sbjct: 249 YFMYRKRHTLIIYDDPSKQAQAYRQMSLLPRRPPGREAHPGDVPHLHPRPPERAAKLSSQ 308

Query: 304 --KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+ TA  +V     + +  I  +V S  DG I L+  L+  G  P  +   S SR+ 
Sbjct: 309 PGEGSTTASPTVETQAGDVSAYIPTNVTSTTDGQIFLSADLSNAGVRPATNVGISASRVG 368

Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421
             A     K++       + +F E         +    D        +     + LKQS 
Sbjct: 369 PAAQIKATKQVAGKSKSELAQFAEPE---ASAQFASDPDKATRNQSARGQRSRELLKQSQ 425


>gi|114777408|ref|ZP_01452405.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1]
 gi|114552190|gb|EAU54692.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1]
          Length = 471

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 152/439 (34%), Positives = 228/439 (51%), Gaps = 8/439 (1%)

Query: 3   KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQ 61
            + +    L + +   L    G +  +       T L     +G    +          +
Sbjct: 8   NSTQRRKVLEDAHKPVLFPVRGKVYKVLGPMLEATGL--KASIGHACNICCSIGHSIEAE 65

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
           ++    +   + PVG    I+ GD +        I       GRV++A G P+D   +L 
Sbjct: 66  IVGFRGEHTLLMPVGSTRGIAPGDPIEPLSTTPSIRVGPHLLGRVLDAQGNPMDEY-ALS 124

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  +         R  ++   + G+R ID   P+  GQR+G+FAG+G+GKSTLL M
Sbjct: 125 NLGTLFPLHGTRLNPFTRHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTLLGM 184

Query: 181 FARSDCFDKVIISLVGERGREVREFIED-YLGDNLKKSVVVVATSDESPILRKMAPLTAV 239
            AR+   +  +I+LVGER REVREF++     + L+ SVV+VATSD  P+LR  A   A 
Sbjct: 185 LARNSDAEVNVIALVGERSREVREFLDQALGSEALQHSVVIVATSDMPPVLRVRAAHMAT 244

Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           TIAE F  +G  VLL++DS+TR A + REI    GE P ++GY  S FS L  LLER GP
Sbjct: 245 TIAEAFREQGKRVLLLMDSLTRVAQAQREIGLMLGEPPASKGYTPSCFSILAELLERSGP 304

Query: 300 SEKEKGNITAVISVLVDGDNH-NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
              + G+I+A  +VLV+GD+   DPIADS  S+LDGHI+L+R LAE+G +P ++ L S+S
Sbjct: 305 GTAQGGDISAFYTVLVEGDDMRADPIADSAMSVLDGHILLDRKLAEQGHFPAINVLRSIS 364

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RL  +  + ++ +    L   +  FE   D+  IG Y  G +  LD  +  +  I  FL+
Sbjct: 365 RLDTQLMNNEQMQAARMLRRKMSIFERMEDMISIGAYEQGSNPELDNIIDNLQEIKGFLQ 424

Query: 419 QSPSDLSS-EDVFQEITKK 436
           Q+ +  S+ ED  Q + + 
Sbjct: 425 QTSNSCSAREDSAQRLLEL 443


>gi|42558308|gb|AAS19863.1| ATP synthase beta chain [Ceradenia jungermannioides]
          Length = 422

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +       +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEARAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSTIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|322704573|gb|EFY96166.1| ATP synthase beta chain [Metarhizium anisopliae ARSEF 23]
          Length = 417

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 109/375 (29%), Positives = 171/375 (45%), Gaps = 19/375 (5%)

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   E +  GD     G    +       GR+IN  G PID    + K D  + I    P
Sbjct: 1   MDGTEGLVRGDKATDTGAPITVPVGPATLGRIINVTGDPIDERGPI-KTDKFLPIHCDPP 59

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             + +    +   TGI+V+D+  P   G +IG+F G+G+GK+  +     +        S
Sbjct: 60  EFVAQSTTAEVLVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYS 119

Query: 194 L---VGERGREVREFIEDYLG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           +   VGER RE  +   +         D   K  +V    +E P  R    LT +TIAEY
Sbjct: 120 VFTGVGERTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTGLTIAEY 179

Query: 245 FS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F   +G +VLL +D+I RF  +  E++   G +P A GY  ++  ++  + ERI  +  +
Sbjct: 180 FRDHEGQDVLLFIDNIFRFTQAGAEVSALLGRIPSAVGYQPTLAVDMGVMQERI--TTTD 237

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           KG+IT+V +V V  D+  DP   +  + LD   VL+R ++E G YP VDPLAS SR+ D 
Sbjct: 238 KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISEIGIYPAVDPLASTSRVLDP 297

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422
                +     + +  ++  ++  +DI  I G     +      V +   +  FL Q   
Sbjct: 298 RIVGQEHYDTATRVQQILQEYKSLKDIIAILGMDELSEAD-KLTVERARKVERFLSQP-- 354

Query: 423 DLSSEDVFQEITKKL 437
             +   VF  I  KL
Sbjct: 355 -FTVAQVFTGIEGKL 368


>gi|42558384|gb|AAS19901.1| ATP synthase beta chain [Micropolypodium zurquinum]
          Length = 422

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRISNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPIRTSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  +     +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPIMESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|119350491|gb|ABL63196.1| AtpB [Fusochloris perforata]
          Length = 393

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   + +  G  V   G+   +       GR+ N LG+P+D    +G  +  + I
Sbjct: 5   VRAVSMNATDGLMRGMDVVDTGKPLTVPVGQTTLGRIFNVLGEPVDNLGPVGNKEG-LPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIARA 123

Query: 189 KVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
              +S+ G   ER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDFSKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +        +  +   ++   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGEEHYECAQNVKQTLQRYKELQDIIAILGLDELSEED-RLIVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLSQP 365


>gi|20467363|gb|AAL27812.1| ATPase beta subunit [Ephedra monosperma]
          Length = 449

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/381 (26%), Positives = 169/381 (44%), Gaps = 19/381 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
            K  +   +V ++  +  V    +   + +  G  V   G    +       GR+ N LG
Sbjct: 22  SKEINITCEVQQLLGNNTVRTVAMSATDGLMRGMKVIDTGAPLSVPVGKMTLGRIFNVLG 81

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +     +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 82  EPVDNLGPIDTS-TTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYRRGGKIGLFGGA 140

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L+     +       +S+ G   ER RE  +   +               K  +
Sbjct: 141 GVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVAL 200

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 201 VYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPS 260

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  +KG+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 261 AVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 318

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           ++ LA +G YP VDPL S S +       +   ++   +   + R++E +DI  I G   
Sbjct: 319 SKGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKELQDIIAILGLDE 378

Query: 398 GVDLILDKAVHQVPIIYDFLK 418
             +      V +   I  FL 
Sbjct: 379 LSEED-RLTVARARKIERFLS 398


>gi|163789448|ref|ZP_02183887.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. AT7]
 gi|159875302|gb|EDP69367.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. AT7]
          Length = 468

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 112/423 (26%), Positives = 188/423 (44%), Gaps = 19/423 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIR----INLDIVYICPVGI 77
           G+I  +      V          + + ++ +   S N   V+     +   ++    +  
Sbjct: 4   GHIVQVIGPVVDVEFPINDTMPEINNALIVEKNKSKNQTVVLETALLLGNGVIRTIAMES 63

Query: 78  GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136
            + +  G  V    +   +       GR+ N LG+ ID  +   +    + I    P   
Sbjct: 64  TDGLQRGMSVIDTEKSISVPVGEETLGRMFNVLGETIDQKEPFPEDAKRLPIHRNAPTFD 123

Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL-- 194
                    +TGI+VID+  P   G +IG+F G+G+GK+ L+     +   +   IS+  
Sbjct: 124 ELSSNTAILETGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFT 183

Query: 195 -VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDN 251
            VGER RE  +   +      +K++ +V    +E P  R    LT +TIAEYF  + G +
Sbjct: 184 GVGERTREGNDLYFEMQESGVIKRTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEVGQD 243

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +   KG+IT++ 
Sbjct: 244 VLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTSKGSITSIQ 301

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           ++ V  D++ DP   +V + LD    L R L E+G YP VDPLAS S          +  
Sbjct: 302 AIYVPADDYTDPAPATVFAHLDATTNLERKLTEQGIYPAVDPLASTSSALSPEIVGEEHY 361

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
           K+ + +  L+ R+ E +DI  I G            V +   I  FL Q+       + F
Sbjct: 362 KVATEVQQLLQRYRELQDIIAILGMDELS-ADEKIIVSRARRIQFFLSQN---FHVAEAF 417

Query: 431 QEI 433
             +
Sbjct: 418 TGL 420


>gi|302747632|gb|ADL63297.1| Atp1 [Santalum album]
          Length = 349

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDYEQRR-VEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G N L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMNALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I L   L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|71370860|gb|AAZ30659.1| ATP synthase beta subunit [Sycon lingua]
          Length = 427

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 18/384 (4%)

Query: 51  HQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINA 108
            QG+++  + +V   +  +      +   E +  G  V   G    I       GR++N 
Sbjct: 11  VQGRDTRLVLEVAQHLGENTARTIAMDGTEGLIRGQAVVDTGGPITIPVGVETLGRIMNV 70

Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168
           +G+PID    +     +  I ++ P  ++    ++  +TGI+V+D+  P   G +IG+F 
Sbjct: 71  IGEPIDERGPIN-AKATAPIHAEAPEFVDMSVEQEILETGIKVVDLLAPYAKGGKIGLFG 129

Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNL-------KKSV 218
           G+G+GK+ L+     +         + + VGER RE  +   + +   +        K  
Sbjct: 130 GAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIVGGVIVLDKPGSKVA 189

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277
           +V    +E P  R    LT +T+AEYF  K   +VLL +D+I RF  +  E++   G +P
Sbjct: 190 LVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 249

Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337
            A GY  ++ +++  + ERI  +  ++G+IT+V ++ V  D+  DP   +  + LD   V
Sbjct: 250 SAVGYQPTLATDMGSMQERI--TTTKEGSITSVQAIYVPADDLTDPAPATTFAHLDATTV 307

Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
           L+R +AE G YP VDPL S SR+ D      +   +  S+  ++  ++  +DI  I G  
Sbjct: 308 LSRGIAELGIYPAVDPLDSTSRILDPNIVGQEHYSIARSVQKILQDYKSLQDIIAILGMD 367

Query: 397 PGVDLILDKAVHQVPIIYDFLKQS 420
              +      V +   I  FL Q 
Sbjct: 368 ELSEED-KLTVARARKIQRFLSQP 390


>gi|42520100|ref|NP_966015.1| F0F1 ATP synthase subunit beta [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|81700105|sp|Q73IG3|ATPB_WOLPM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|42409837|gb|AAS13949.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 475

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 167/371 (45%), Gaps = 19/371 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           I  +IV    +   + +S GD     G    +       GR+ N +G+ ID    L    
Sbjct: 48  IGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVPIGRSTLGRIFNVVGELIDECGPLKGKY 107

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I    P    ++  E+   TGI+VID+  P   G +IG+F G+G+GK+ L+     
Sbjct: 108 NLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELIN 167

Query: 184 SDCFDK---VIISLVGERGREVREFIEDY--------LGDNLKKSVVVVATSDESPILRK 232
           +         + + VGER RE  +   +               ++V+V    +E P  R 
Sbjct: 168 NIAKAHKGFSVFAGVGERTREGNDLYHEMITSNVININEHEKSQAVLVYGQMNEPPGARA 227

Query: 233 MAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF  +   +VL  +D+I RF  +  EI+   G +P A GY  ++ +++ 
Sbjct: 228 RVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMG 287

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            + ERI       G+IT+V ++ V  D+  DP   +  S LD   VL+R +AE G YP V
Sbjct: 288 AMQERIA--STTSGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQIAEMGIYPAV 345

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV-HQ 409
           DPL S S+         +   + S +  ++  ++  +DI  I G     D   DK +  +
Sbjct: 346 DPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDE--DKIIVDR 403

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 404 ARKIQKFLSQP 414


>gi|154424969|emb|CAL18587.1| ATP synthase alpha subunit [Streptococcus pluranimalium]
          Length = 367

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 13/367 (3%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +          G    +  + + I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFSNG---AFGMAQNLESNDIGIIVLGDFSTIREGDVVKRTGKIMEVPVGEEL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG P+DG   + K   +  +    P  M+R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGIPVDGLGDI-KTSKTRPVEEAAPGVMDRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  +      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELIIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER          G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E         + 
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE---AFTQFG 360

Query: 397 PGVDLIL 403
             +D   
Sbjct: 361 SDLDAAT 367


>gi|302747400|gb|ADL63181.1| Atp1 [Claytonia virginica]
          Length = 349

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   VG++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQLNSRATSESETLYCVYVAVGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSPKLELAQ 349


>gi|4519314|dbj|BAA75572.1| ATP synthase beta-subunit [Gonium quadratum]
          Length = 376

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVVDTGKPLSVPVGNVTLGRIFNVLGEPVDNMGNVVVSE-TLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVERQLADSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDVNKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWIVGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEED-RLIVSRARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|255582911|ref|XP_002532227.1| ATP synthase beta subunit, putative [Ricinus communis]
 gi|223528084|gb|EEF30158.1| ATP synthase beta subunit, putative [Ricinus communis]
          Length = 561

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 107/415 (25%), Positives = 183/415 (44%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + H  +    + Q +     +V    +   E 
Sbjct: 91  GQVCQVIGAVVDVRFDEGLPPILTALEVLDHSIRLVLEVAQHLG--GSMVRTIAMDGTEG 148

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+PID    L K D  + I  + P  +++ 
Sbjct: 149 LVRGQKVLNTGSPITVPVGRATLGRIINVIGEPIDEKGDL-KTDHFLPIHREAPSFVDQA 207

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 208 TEQQILVTGIKVVDMLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 267

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 268 ERTREGNDLYREMIESGVIKLGDKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 327

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 328 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 385

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 386 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHIL 445

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 446 GEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQKFLSQP 499


>gi|21242695|ref|NP_642277.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108168|gb|AAM36813.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 458

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 144/427 (33%), Positives = 223/427 (52%), Gaps = 5/427 (1%)

Query: 13  EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72
           E  +   +++ G +     +    T       +G     +        +V+    +  Y+
Sbjct: 30  EPTAGRTLIREGILRRAVGLTLEATG--CEAPMGATCKVEVDGGWVDAEVVGFAGERTYL 87

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
            P      +     V    R   +       GRVI++ G P+DG   + + + S+ +   
Sbjct: 88  IPSAELHGLLPNARVVPSRRRGGVEVGEGLLGRVIDSDGTPLDGKGPI-RAEGSIGMAGV 146

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191
               + R+ +      G+R I+   P+  GQR+G+FAGSG+GKSTLL M  R    D ++
Sbjct: 147 SINPLAREPITTSLDVGVRAINAMLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIV 206

Query: 192 ISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250
           + L+GERGREVR+F+      + L+++VVV A +D  P+ R      A  IAE+F  +G 
Sbjct: 207 VGLIGERGREVRDFVETTLGEEGLRRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGL 266

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           NVLL++DS+TRFA + REI  + GE P  RGYP SVF++LP L+ER G   K +G+ITA 
Sbjct: 267 NVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALVERAGNGAKGRGSITAF 326

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +VL +GD+  DPIAD+ R+ILDGHI+L+R +A+ G YP +D  +SVSR+         +
Sbjct: 327 YTVLTEGDDPQDPIADAARAILDGHILLSRRVADSGLYPAIDLESSVSRVVQDIADDTWR 386

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430
             +  L  L+  +   RD+  IG Y+ G D   D+A+ + P I +FL Q     S     
Sbjct: 387 LRIRKLKRLLSAYTANRDLIAIGAYQRGSDPATDEALARWPEIVEFLGQDVHKASLLSDS 446

Query: 431 QEITKKL 437
               ++L
Sbjct: 447 LSALQQL 453


>gi|162462751|ref|NP_001105340.1| ATP synthase subunit beta, mitochondrial precursor [Zea mays]
 gi|114420|sp|P19023|ATPBM_MAIZE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor
 gi|22173|emb|CAA38140.1| unnamed protein product [Zea mays]
 gi|897618|gb|AAA70268.1| mitochondrial F-1-ATPase subunit 2 [Zea mays]
 gi|223943103|gb|ACN25635.1| unknown [Zea mays]
          Length = 553

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 105/413 (25%), Positives = 181/413 (43%), Gaps = 20/413 (4%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEIS 82
           G +  +      V        +   +     N   + +V   +  ++V    +   E + 
Sbjct: 83  GQVCQVIGAVVDVRFDEGLPPILTALEVLDNNIRLVLEVAQHLGENMVRTIAMDGTEGLV 142

Query: 83  LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  V + G    +       GR+IN +G+PID    + K +  + I  + P  + +   
Sbjct: 143 RGQRVLNTGSPITVPVGRATLGRIINVIGEPIDEKGDI-KTNHFLPIHREAPAFVEQATE 201

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGER 198
           ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VGER
Sbjct: 202 QQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 261

Query: 199 GREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
            RE  +   + +              K  +V    +E P  R    LT +T+AE+F    
Sbjct: 262 TREGNDLYREMIESGVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAE 321

Query: 250 -DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308
             +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+IT
Sbjct: 322 GQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSIT 379

Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSA 367
           +V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+        
Sbjct: 380 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGE 439

Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 440 DHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 491


>gi|78213686|ref|YP_382465.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9605]
 gi|118573771|sp|Q3AHM2|ATPB_SYNSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|78198145|gb|ABB35910.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9605]
          Length = 487

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G I  +      V   +  +  + + +  +GKN          +V ++  D  V    + 
Sbjct: 13  GVIRQVIGPVLDVEFPAGKLPKIYNALRIEGKNPAGDDVALTAEVQQLLGDHRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  GTDGLVRGMEAVDTGAPISVPVGEGTLGRIFNVLGEPVDEQGPVNTT-ATAPIHRDAPNI 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
              +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 132 TELETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 192 GGVGERTREGNDLYEEFKESGVINADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ER+      
Sbjct: 252 FRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERVA--STV 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VLNR+LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A   D   +   ++   + R++E +DI  I G     +    + V +   +  FL Q 
Sbjct: 370 AVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKVEKFLSQP 426


>gi|114509182|gb|ABI75159.1| ATPase alpha subunit [Aponogeton crispus]
          Length = 355

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/360 (25%), Positives = 157/360 (43%), Gaps = 19/360 (5%)

Query: 36  VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI 95
           V  L + +  G+ V      S   G  + +  + V I   G    I  GDLV   G    
Sbjct: 1   VYGL-KEIQAGEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVD 56

Query: 96  SP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154
            P      GRV++ALG PIDG  SL   +    +  K P  + R+ V +  +TG++ +D 
Sbjct: 57  VPAGKSLLGRVVDALGIPIDGRGSLSDHE-RRRVEVKAPGIIERRSVHEPMQTGLKAVDS 115

Query: 155 FTPLCHGQRIGVFAGSGIGKSTL----------LSMFARSDCFDKVIISLVGERGREVRE 204
             P+  GQR  +      GK+ +          L+  A+ +     +   +G++   V +
Sbjct: 116 LVPIGRGQRELIIGDRQTGKTAIAVDTILNQKELNAKAKENAKLYCVYVAIGQKRSTVAQ 175

Query: 205 FIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
            ++     N  + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A
Sbjct: 176 LVQILSSANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQA 235

Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHN 321
            + R+++      P    +P  VF    RLLER     +E   G++TA+  +     + +
Sbjct: 236 VAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSEETGAGSLTALPVIETQAGDVS 295

Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381
             I  +V SI DG I L   L   G  P ++   SVSR+   A     K++  S    + 
Sbjct: 296 AYIPTNVISITDGQICLETELFYRGLRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELA 355


>gi|42558388|gb|AAS19903.1| ATP synthase beta chain [Prosaptia contigua]
 gi|42558392|gb|AAS19905.1| ATP synthase beta chain [Prosaptia pubipes]
          Length = 422

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 169/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGLEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATTSAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|4519348|dbj|BAA75589.1| ATP synthase beta-subunit [Vitreochlamys ordinata]
          Length = 376

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 18/362 (4%)

Query: 73  CPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131
             +   E +  G  V   G+   +       GR+ N LG+P+D   ++   + ++ I   
Sbjct: 1   VSMNPTEGLMRGMEVADTGKPLSVPVGKVTLGRIFNVLGEPVDNMGNVL-VEETLPIHRT 59

Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV- 190
            P   +       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       
Sbjct: 60  APAFADLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGG 119

Query: 191 --IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVT 240
             + + VGER RE  +   +               K  +V    +E P  R    LTA+T
Sbjct: 120 VSVFAGVGERTREGNDLYTEMKESGVIVEKNLSDSKVALVYGQMNEPPGARMRVALTALT 179

Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299
           +AEYF      +VL  +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  
Sbjct: 180 MAEYFRDINKQDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI-- 237

Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359
           +  + G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S 
Sbjct: 238 TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTST 297

Query: 360 LADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           +       +       S+   + R++E +DI  I G     +      V +   I  FL 
Sbjct: 298 MLQPWILGEKHYDSAQSVKKTLQRYKELQDIIAILGLDELSEDD-RLIVARARKIERFLS 356

Query: 419 QS 420
           Q 
Sbjct: 357 QP 358


>gi|118573739|sp|Q4UK18|ATPB_RICFE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
          Length = 474

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 186/420 (44%), Gaps = 20/420 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +KN+      IS++  V +T       + L     +  K    L     I  D V    +
Sbjct: 2   TKNIGKITQIISAVVDVKFTNNGELPEI-LNALECYNDKQRIVLEVAQHIGDDTVRCIAM 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   RI       GR++N +G+PIDG   +   ++S  I    P 
Sbjct: 61  DSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNIS-SIYKSAPD 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             N+        TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 120 FTNQSTERNILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTV 179

Query: 192 ISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +   + +             K  +V    +E P  R    L+ +TIAE
Sbjct: 180 FAGVGERTREGNDLYHEMIDSGVIDLEKPENSKVALVYGQMNEPPGARARVALSGLTIAE 239

Query: 244 --YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 240 SFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ 
Sbjct: 298 TKNGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVL 357

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D     +E   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 DPMIVGEEHYSVARQVQQILQTYKSLQDIIAILGMDELSEED-KLTVSRARKIQRFLSQP 416


>gi|325684414|gb|EGD26582.1| ATP synthase F1 sector beta subunit [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 490

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 177/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIV-YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           V +  +   + +V     D V     +   + +  G  V   G    +       GRV N
Sbjct: 44  VIKSDDDSIILEVTLEQGDGVLRCIAMESTDGLRRGMKVEDTGSSISVPVGPDTLGRVFN 103

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG            I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 104 VLGQPIDGGSEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRGGKVGLF 163

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 164 GGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 223

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 224 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 283

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 284 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 341

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +   + + + H++ R+ E +DI  + G     D 
Sbjct: 342 VEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDIISVLGMDELSDE 401

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 402 E-KLIVARARRIQFFLSQN 419


>gi|149798689|gb|ABR32035.1| ATP synthase beta chain [Eriosorus cheilanthoides]
          Length = 426

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 160/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    +    
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAIDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVCNS- 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV-----------VVATSDESPILRK 232
           +       +S+ G  G   RE  + Y+     K +            V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMETKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|301062825|ref|ZP_07203423.1| alternate F1F0 ATPase, F1 subunit alpha [delta proteobacterium
           NaphS2]
 gi|300443087|gb|EFK07254.1| alternate F1F0 ATPase, F1 subunit alpha [delta proteobacterium
           NaphS2]
          Length = 551

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 192/422 (45%), Gaps = 16/422 (3%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81
           + G+I S+         L + V   + V     + D  G V+ I  D V I   G  E +
Sbjct: 38  EVGHIKSVGQGIVWADGLGE-VQNEELVTI---DPDISGMVLDILPDRVGIILFGPSEAV 93

Query: 82  SLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
           S G+ V   GR   +  S    GRV++ LG+P+DG   + + +  + ++ + PP M+R  
Sbjct: 94  SAGNQVARSGRVLDVPVSDHLIGRVVDPLGRPMDGKG-IIEANKRLVVLREAPPIMDRAP 152

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGER 198
           V K  +TG++V+D   P+  GQR  +      GK+ L      +        I   +G+R
Sbjct: 153 VVKPLQTGLKVVDALFPIGRGQRELILGDRQTGKTALALDAIVNQKGKDVLCIYCAIGQR 212

Query: 199 GREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
              + + + +   +     SVV+V   D+ P L+ +AP  A T+ E+F  +G +VL++ D
Sbjct: 213 SSGIAKVVAELEREGAMDYSVVIVVEGDDPPGLQFIAPYAATTMGEFFMEQGKDVLIVYD 272

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER--IGPSEKEKGNITAVISVLV 315
            +TR A + R+++      P    +P  +F    RLLER      E+  G++TA+     
Sbjct: 273 DMTRHALAYRQLSLLLRRPPGREAFPGDIFYVHSRLLERSTHLKEERGGGSLTALPIAET 332

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375
           +  N +  I  ++ SI DG I L+  L ++G  P VD   SVSR+  KA     +++   
Sbjct: 333 EAQNISAYIPTNLISITDGQIYLSPELFQKGVLPAVDVGKSVSRVGGKAQIPAYRQVAGD 392

Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435
           L     +F+E         +   +D      +     + + LKQ   +LS+    ++I  
Sbjct: 393 LRLSYTQFQELE---AFARFGTRLDERTRATLEHGRRVREALKQR--ELSTMTAGEQIAV 447

Query: 436 KL 437
            L
Sbjct: 448 LL 449


>gi|149384399|gb|ABR25022.1| ATP synthase beta chain [Asplenium juglandifolium]
          Length = 426

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+  G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYRRGGKIGLSGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|6017790|gb|AAF01629.1| ATP synthase beta subunit [Glaucidium palmatum]
          Length = 491

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 178/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + ++ +G+  D +GQ I +  ++        V    
Sbjct: 14  GXIAQIIGPVLDVAFPPGKMPNIYNALIVKGQ--DTVGQQINVTCEVQQLLGNNRVRAVA 71

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +       P
Sbjct: 72  MSATDGLMRGMEVTDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPID-XRTTSPXHRSAP 130

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 131 DFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 190

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 191 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 250

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      +VLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 251 EYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 308

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + L    VL R LA +G YP VDPL S S + 
Sbjct: 309 TKEGSITSIQAVYVPADDLTDPAPATTFAHLXATTVLXRGLAAKGXYPAVDPLDSTSTML 368

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 369 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 427


>gi|42558430|gb|AAS19924.1| ATP synthase beta chain [Campyloneurum angustifolium]
          Length = 413

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 100/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+  D   +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIDVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    + +   +  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPV-RSSATSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   +  ++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQCYKELQDIIAIPGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|34581172|ref|ZP_00142652.1| ATP synthase beta chain [Rickettsia sibirica 246]
 gi|28262557|gb|EAA26061.1| ATP synthase beta chain [Rickettsia sibirica 246]
          Length = 473

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 115/420 (27%), Positives = 186/420 (44%), Gaps = 20/420 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +KN+      IS++  V +T       + L     +  K    L     I  D V    +
Sbjct: 2   TKNIGKITQIISAVVDVKFTNNGKLPEI-LNALECYNDKQRIVLEVAQHIGDDTVRCIAM 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   RI       GR++N +G+PIDG   +   ++S  I    P 
Sbjct: 61  DSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNIS-SIYKPAPD 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             N+        TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 120 FTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTV 179

Query: 192 ISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +   + +             K  +V    +E P  R    L+ +TIAE
Sbjct: 180 FAGVGERTREGNDLYHEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAE 239

Query: 244 --YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                ++G +VL  +D+I RF  +  E++   G +P A GY  ++ S++  L ERI  + 
Sbjct: 240 SFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLASDMGELQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ 
Sbjct: 298 TKYGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVL 357

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D     +E   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 DPMIVGEEHYSVARQVQQVLQTYKSLQDIITILGMDELSEED-KLTVARARKIQRFLSQP 416


>gi|302191117|ref|ZP_07267371.1| F0F1 ATP synthase subunit beta [Lactobacillus iners AB-1]
 gi|309803208|ref|ZP_07697305.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 11V1-d]
 gi|312871593|ref|ZP_07731685.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 3008A-a]
 gi|308164716|gb|EFO66966.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 11V1-d]
 gi|311092818|gb|EFQ51170.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 3008A-a]
          Length = 480

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 113/381 (29%), Positives = 181/381 (47%), Gaps = 16/381 (4%)

Query: 51  HQGKNSDNLGQVIRINLD----IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
            +  N D L  V+ + L+    ++    +   + +  G  V   G    +       GRV
Sbjct: 33  VKNTNGDIL--VLEVTLELGDGVLRTISMESTDGLRRGMEVEDTGGPISVPVGKATLGRV 90

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG PIDG   +        I    P   +    E+  +TGI+VID+  P   G ++G
Sbjct: 91  FNVLGDPIDGGPEIADDVQRDGIHKDAPKYNDLSTSEEILETGIKVIDLLEPYVRGGKVG 150

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVV 221
           +F G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V 
Sbjct: 151 LFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLAKTAMVF 210

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A 
Sbjct: 211 GQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGRMPSAV 270

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L R
Sbjct: 271 GYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATTNLER 328

Query: 341 SLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            L E+G YP VDPL S S   D      D  ++   + H++ R++E +DI  + G     
Sbjct: 329 RLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRYQELQDIISVLGMDELS 388

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  FL Q+
Sbjct: 389 DEE-KLIVARARKIQFFLSQN 408


>gi|290745861|gb|ADD51600.1| ATP synthase beta chain [Lellingeria major]
          Length = 392

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G      G    +       GR+ N LG+P+D    +    
Sbjct: 6   LGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPVRSSA 65

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
           +S  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+  ++    
Sbjct: 66  IS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVPITESIN 124

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 125 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 184

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 185 RVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 244

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 245 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 302

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 303 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 361

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 362 RKIERFLSQP 371


>gi|282934187|ref|ZP_06339465.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
 gi|281301801|gb|EFA94067.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1]
          Length = 480

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 177/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V +  +     +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDETITLEVTLELGDGVLRTISMESTDGLRCGMKVVDTGAPISVPVGDDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG PID             I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KMIVARARKIQFFLSQN 408


>gi|149384501|gb|ABR25073.1| ATP synthase beta chain [Ctenitis submarginalis]
          Length = 422

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+  G+G+GK+ L++    
Sbjct: 60  ATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLLGGAGVGKTVLITESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|29726128|gb|AAD00591.2| ATP synthase beta subunit [Corydalis nobilis]
          Length = 489

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 110/420 (26%), Positives = 177/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V+    +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 12  GRIAQIIGPVLDVSFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 69

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG P+     +        I    P
Sbjct: 70  MSATDGLMRGMDVIDTGAPLSVPVGGSTLGRIFNVLGXPVXNXGPVD-TRXXXPIHRSAP 128

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 129 AFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 188

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 189 VFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 248

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G    A GY  ++ +E+  L ERI  + 
Sbjct: 249 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRXXSAVGYQPTLSTEMGSLQERI--TS 306

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 307 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 366

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 367 QPRIVGQEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKMERFLSQP 425


>gi|42558344|gb|AAS19881.1| ATP synthase beta chain [Grammitis forbesiana]
          Length = 422

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMSAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L++    +       +S+ G   ER RE  +   +               K   
Sbjct: 142 GVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAS 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|222619064|gb|EEE55196.1| hypothetical protein OsJ_03042 [Oryza sativa Japonica Group]
          Length = 480

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + H  +    + Q +    ++V    +   E 
Sbjct: 10  GQVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLG--ENMVRTIAMDGTEG 67

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR++N +G+PID    +      + I  + P  + + 
Sbjct: 68  LVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHF-LPIHREAPAFVEQA 126

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 127 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 186

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 187 ERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 246

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 247 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 304

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 305 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVL 364

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 365 GEDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 418


>gi|149384407|gb|ABR25026.1| ATP synthase beta chain [Asplenium normale]
          Length = 426

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G  V   G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGVIDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+  G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEDD-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|104773795|ref|YP_618775.1| F0F1 ATP synthase subunit beta [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|118573689|sp|Q1GAW5|ATPB_LACDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|103422876|emb|CAI97538.1| H+ transporting ATPase / ATP synthase, beta subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 479

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQVIRINLDIV-YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107
           V +  +   + +VI    D V     +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDDSIILEVILEQGDGVLRCIAMESTDGLRRGMKVEDTGSSISVPVGPDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+PIDG            I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG+IT++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +   + + + H++ R+ E ++I  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQNIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KLIVARARRIQFFLSQN 408


>gi|297205778|ref|ZP_06923173.1| ATP synthase F1 sector beta subunit [Lactobacillus jensenii JV-V16]
 gi|297148904|gb|EFH29202.1| ATP synthase F1 sector beta subunit [Lactobacillus jensenii JV-V16]
          Length = 480

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 11/379 (2%)

Query: 50  VHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107
           V +  +     +V + +   ++    +   + +  G  V   G    +       GRV N
Sbjct: 33  VIKSDDETITLEVTLELGDGVLRTISMESTDGLRRGMKVVDTGAPISVPVGDDTLGRVFN 92

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG PID             I  + P         +  +TGI+VID+  P   G ++G+F
Sbjct: 93  VLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRGGKVGLF 152

Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVVAT 223
            G+G+GK+T++     +   +   IS+   VGER RE  +   +     +  K+ +V   
Sbjct: 153 GGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKTAMVFGQ 212

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +ESP  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 213 MNESPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 272

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+ +L ERI  +  +KG++T++ +V V  D++ DP   +  + LD    L RSL
Sbjct: 273 QPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATTNLERSL 330

Query: 343 AEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
            E+G YP VDPL S S   D      +  ++ + + H++ R+ E +DI  + G     D 
Sbjct: 331 VEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDIISVLGMDELSDE 390

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q+
Sbjct: 391 E-KMIVARARKIQFFLSQN 408


>gi|225424142|ref|XP_002283951.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 557

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 105/415 (25%), Positives = 184/415 (44%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + +  +    + Q +    ++V    +   E 
Sbjct: 87  GSVCQVIGAVVDVRFDEGLPPILTALEVLDNSIRLVLEVAQHLG--ENMVRTIAMDGTEG 144

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+PID    + K D  + I  + P  +++ 
Sbjct: 145 LVRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDERGEI-KTDHFLPIHREAPSFVDQA 203

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 204 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 263

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 264 ERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 323

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 324 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 381

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW- 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 382 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHIL 441

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 442 GEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 495


>gi|149384585|gb|ABR25115.1| ATP synthase beta chain [Lomagramma guianensis]
          Length = 426

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     
Sbjct: 60  ATFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+ +DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLSDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|42558386|gb|AAS19902.1| ATP synthase beta chain [Prosaptia alata]
          Length = 422

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 104/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 17  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGR 76

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 77  IFNVLGEPVDNLGPVRSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 135

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+ L++    +       +S+ G   ER RE  +   +             
Sbjct: 136 GLFGGAGVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 195

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 196 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 255

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   +  + L
Sbjct: 256 LGRMPSAVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATTSAHL 313

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 314 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 373

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 374 ILGLDELSEED-RLTVARARKIERFLSQP 401


>gi|227438089|gb|ACP30542.1| ATP synthase alpha subunit [Streptococcus sp. CSL 7508]
          Length = 347

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 153/348 (43%), Gaps = 10/348 (2%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGR 104
           G+ +  +       G    +  + + I  +G    I  G+LV   G+   +       GR
Sbjct: 3   GELLEFENG---VYGMAQNLESNDIGIIILGDFSSIREGNLVKRTGKIMEVPVGEELIGR 59

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V+N LG P+DG   + K D +  + +  P  M R+ V +  +TG++ ID   P+  GQR 
Sbjct: 60  VVNPLGLPVDGLGDI-KTDKTRPVEAPAPGVMERKSVSEPLQTGLKAIDALVPIGRGQRE 118

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSVVVV 221
            +      GK+ +      +        I   +G++   VR  +E          ++VV 
Sbjct: 119 LIIGDRQTGKTAVAIDTILNQKGQDMICIYVAIGQKESTVRTQVETLRRYGALDYTIVVT 178

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281
           A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P    
Sbjct: 179 ASASQPSPLLFIAPYAGVAMAEEFMYNGKHVLVVYDDLSKQAVAYRELSLLLRRPPGREA 238

Query: 282 YPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339
           YP  VF    RLLER      E   G+ITA+  +     + +  IA +V SI DG I L 
Sbjct: 239 YPGDVFYLHSRLLERSAKVSDELGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQ 298

Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            SL   G  P +D  +SVSR+   A     KK+  +L   +  + E  
Sbjct: 299 ESLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE 346


>gi|149384451|gb|ABR25048.1| ATP synthase beta chain [Woodwardia virginica]
          Length = 426

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 161/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLMRGMGAVDTGAPLSVPVGETTLGRISNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWVVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|149384393|gb|ABR25019.1| ATP synthase beta chain [Asplenium forisiense]
          Length = 426

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G   V   G   +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGAVDTGGPLSVPVGETTLGRIFNVLGEPVDNLGPV-QSS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+  G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLSGGAGVGKTALIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPPAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +       +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYDTAQGVKQTLQRYKELQDIIAILGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|42558370|gb|AAS19894.1| ATP synthase beta chain [Lellingeria subsessilis]
          Length = 422

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGEITLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|7708252|emb|CAB90055.1| ATP synthase beta subunit [Campanula trachelium]
          Length = 493

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 113/424 (26%), Positives = 178/424 (41%), Gaps = 31/424 (7%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI--------V 70
              G I  I      V      +       VV    NS   GQ I +  ++        V
Sbjct: 16  TSQGXIGQIIGPVLDVAFPPGKMPNIYNALVVXXRDNS---GQPINVTCEVQQLLGNNRV 72

Query: 71  YICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129
               +   + +  G  V        +       GR+ N LG+PID    +     +  I 
Sbjct: 73  RAVAMSATDGLMRGMEVIDTAXPLSVPVGGATLGRIFNVLGEPIDNLGPVD-TRTTSPIH 131

Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189
              P  ++       F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +     
Sbjct: 132 RSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 191

Query: 190 VIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTA 238
             +S+ G   ER RE  +  ++               K   V    +E P  R    LTA
Sbjct: 192 GGVSVFGGVGERTREGNDLYKEMKDSGVINEQKFAESKVAXVYGQMNEPPGARMRVGLTA 251

Query: 239 VTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297
           +T+AEYF      +VLL +D+I     +  E++   G +P A GY  ++ +E+  L ERI
Sbjct: 252 LTMAEYFRDVNKQDVLLFIDNIFGLVQAGSEVSALLGRMPSAVGYQLTLSTEMGSLQERI 311

Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357
             +  +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S 
Sbjct: 312 --TSTKKGSITSIQAVYVPADDLTDPAPATHIAHLDATTVLSRGLAAKGIYPAVDPLDST 369

Query: 358 SRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416
           S +      S +  +   S+   + R++E +DI  I G     +      V +   I  F
Sbjct: 370 STMLQPRIVSDEHYQTAQSVKQTLQRYKELQDIITILGLDELSEED-RLTVARARKIERF 428

Query: 417 LKQS 420
           L Q 
Sbjct: 429 LSQP 432


>gi|113476898|ref|YP_722959.1| F0F1 ATP synthase subunit beta [Trichodesmium erythraeum IMS101]
 gi|123056409|sp|Q10Z38|ATPB_TRIEI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|110167946|gb|ABG52486.1| ATP synthase F1, beta subunit [Trichodesmium erythraeum IMS101]
          Length = 484

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 177/383 (46%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALG 110
           G++     +V ++  D  V    +   + +  G  V        +       GR+ N +G
Sbjct: 46  GQDVSVTCEVQQLLGDNQVRAVAMSATDGLVRGMEVVDTRAAISVPVGNATLGRIFNVVG 105

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +G  D S  I  + P  ++ +     F+TGI+V+D+  P   G +IG+F G+
Sbjct: 106 EPVDELGPVGTEDKS-PIHREAPKLVDLETQPSVFETGIKVVDLLAPYRRGGKIGLFGGA 164

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ ++     +       +S+ G   ER RE  +   + +             K  +
Sbjct: 165 GVGKTVIIMELINNIAKAHGGVSVFGGVGERTREGNDLYNEMIESKVINPENLSESKVAL 224

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    L+A+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 225 VYGQMNEPPGARMRVGLSALTMAEYFRDVSKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 284

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 285 AVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 342

Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +   +  ++   + R++E +DI  I G   
Sbjct: 343 SRGLASKGIYPAVDPLDSTSTMLQPSVVGKEHYDVARAVQSTLQRYKELQDIIAILGLDE 402

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 403 LSEDD-RLVVARARKIERFLSQP 424


>gi|108773322|ref|YP_635877.1| CF1 beta subunit of ATP synthase [Oltmannsiellopsis viridis]
 gi|118573711|sp|Q20EW8|ATPB_OLTVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|82541904|gb|ABB81945.1| CF1 beta subunit of ATP synthase [Oltmannsiellopsis viridis]
          Length = 481

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKN-----SDNLGQVIRINLDI-VYICPVG 76
           G +  I      V   +  +  + + +V +G+N          +V ++  D  V    + 
Sbjct: 11  GKVVQIIGPVLDVEFSADQMPNIYNAIVVEGENLAGTKVSVTCEVQQLLGDHCVRAVSMS 70

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V   G    +       GR+ N LG+P+D    +   +  + I    P  
Sbjct: 71  ATDGLMRGMDVVDTGAPLTVPVGTSTLGRIFNVLGEPVDNLGDVS-NEGGLPIHRPAPLF 129

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
           ++       FKTGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ 
Sbjct: 130 VDLDTQLSIFKTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF 189

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +   +               K  +V    +E P  R    LTA+T+AEY
Sbjct: 190 GGVGERTREGNDLYAEMKESKVINEDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEY 249

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  +
Sbjct: 250 FRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTK 307

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
            G+IT++ +V V  D+  DP   +  + LD   VL+R+LA +G YP VDPL S S +   
Sbjct: 308 DGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQP 367

Query: 364 AWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               +E      ++   + R++E +DI  I G     D      V +   I  FL Q 
Sbjct: 368 QTLGEEHYGCAQAVKTTLQRYKELQDIIAILGLDELSDED-RLVVARARKIERFLSQP 424


>gi|7708270|emb|CAB90059.1| ATP synthase beta subunit [Ehrendorferia chrysantha]
          Length = 494

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 17  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 74

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P D    +          S  P
Sbjct: 75  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPXDNLGPVDXXXXXXXXXS-AP 133

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 134 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 193

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 194 VFGXVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 253

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 254 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 311

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 312 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 371

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 372 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 430


>gi|904090|gb|AAA70364.1| adenosine triphosphatase [Dicentra eximia]
          Length = 498

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 113/420 (26%), Positives = 179/420 (42%), Gaps = 29/420 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D  GQ I +  ++        V    
Sbjct: 21  GRIAQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTAGQQINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P D    +          S  P
Sbjct: 79  MSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPXDNLGPVDXXXXXXXXXS-AP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E P  R    LTA+T+A
Sbjct: 198 VFGXVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           EYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 EYFRDVNKQNVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            +KG+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
                  +  +    +     R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 376 QPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEED-RLTVARARKIERFLSQP 434


>gi|297806943|ref|XP_002871355.1| hypothetical protein ARALYDRAFT_487710 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317192|gb|EFH47614.1| hypothetical protein ARALYDRAFT_487710 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 559

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 19/371 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V + G    +       GR++N LG+PID    + K +
Sbjct: 131 LGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEI-KTE 189

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  ++    ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 190 HYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELIN 249

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILR 231
           +         + + VGER RE  +   + +              K  +V    +E P  R
Sbjct: 250 NVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGAR 309

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ S+L
Sbjct: 310 ARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDL 369

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP 
Sbjct: 370 GALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPA 427

Query: 351 VDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+        +       +  ++  ++  +DI  I G     +      V +
Sbjct: 428 VDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVAR 486

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 487 ARKIQRFLSQP 497


>gi|260752865|ref|YP_003225758.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552228|gb|ACV75174.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 443

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 145/428 (33%), Positives = 227/428 (53%), Gaps = 7/428 (1%)

Query: 1   MQKNLETLAQLA---EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57
           M ++L   A          +      G + +   +    T     +  G  ++       
Sbjct: 1   MSESLAAYAGRILGHVSIDEGTPRWIGKLVAYDGLTLEATGFPMPIGHGALIM-DANGQS 59

Query: 58  NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRIS-PSACWCGRVINALGKPIDGD 116
           +  +V+    +   +  +      + G  V    +  I        GRVI ALG+P+D  
Sbjct: 60  SRAEVVGFRGNTTLLMALDADAPHNPGARVEPDRQLSIVHVGDGLLGRVIGALGEPLDNL 119

Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176
             +   D    ++ K+   +NR RV + F  G+R I+       GQRI + AGSG+GKS 
Sbjct: 120 GPII-TDEYWPLVGKMGNPLNRGRVTQPFDMGVRAINALLTAGVGQRIAIMAGSGVGKSV 178

Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235
           L+         D ++  L+GER REV +F+E  + D+++ KSVVV   +D  P+LR  A 
Sbjct: 179 LMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSVVVAVPADHPPVLRLRAA 238

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           + A  IAEYF +KG NVLL++DS+TR AH+ RE+  + GE P  +GYP S    +PRL+E
Sbjct: 239 MRATAIAEYFRAKGKNVLLLIDSLTRIAHAQREVGLSLGEPPTIKGYPPSALGLIPRLVE 298

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           R G     KG ITA+ +VL DGD+ +DPI D+ R+I+DGHI+L+RSLAE+G +P +D   
Sbjct: 299 RAGIDIHSKGAITAIYTVLADGDDPDDPIVDTARAIVDGHIILSRSLAEQGVFPAIDLGK 358

Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
           S+SR+     S   ++  + L  L   +EE RD+ L+G YR G D  +D+A+++   + D
Sbjct: 359 SLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRSGTDASIDEAINRHNDVLD 418

Query: 416 FLKQSPSD 423
           F++Q  ++
Sbjct: 419 FIRQGQNE 426


>gi|3893822|gb|AAD03393.1| ATPase beta subunit [Nicotiana sylvestris]
          Length = 555

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 104/414 (25%), Positives = 180/414 (43%), Gaps = 23/414 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + +Q +    + Q +    ++V    +   E 
Sbjct: 86  GKVCQVIGAVLDVRFDEGLPPILTALEVLDNQIRLVLEVAQHLG--ENMVRTIAMDGTEG 143

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+PID    +   D  + I  + P  + + 
Sbjct: 144 LVRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDERGDIN-TDHFLPIHREAPAFVEQA 202

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV--IISLVGE 197
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +        +   VGE
Sbjct: 203 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGFSVFPGVGE 262

Query: 198 RGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
              E  +   + +              K  +V    +E P  R    LT +T+AE+F   
Sbjct: 263 PSAEGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDA 322

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+I
Sbjct: 323 EGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSI 380

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-S 366
           T+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+       
Sbjct: 381 TSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILG 440

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 441 EDHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KMTVARARKIQRFLSQP 493


>gi|22326673|ref|NP_680155.1| ATP synthase beta chain, mitochondrial, putative [Arabidopsis
           thaliana]
 gi|75333362|sp|Q9C5A9|ATPBO_ARATH RecName: Full=ATP synthase subunit beta-3, mitochondrial; Flags:
           Precursor
 gi|13548326|emb|CAC35873.1| H+-transporting ATP synthase beta chain (mitochondrial)-like
           protein [Arabidopsis thaliana]
 gi|26450906|dbj|BAC42560.1| putative H+-transporting ATP synthase beta chain (mitochondrial)
           [Arabidopsis thaliana]
 gi|29028952|gb|AAO64855.1| At5g08680 [Arabidopsis thaliana]
 gi|332003954|gb|AED91337.1| ATP synthase subunit beta-3 [Arabidopsis thaliana]
          Length = 559

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 19/371 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  ++V    +   E +  G  V + G    +       GR++N LG+PID    + K +
Sbjct: 131 LGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEI-KTE 189

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I    P  ++    ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 190 HYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELIN 249

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILR 231
           +         + + VGER RE  +   + +              K  +V    +E P  R
Sbjct: 250 NVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEPPGAR 309

Query: 232 KMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290
               LT +T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ S+L
Sbjct: 310 ARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDL 369

Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350
             L ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP 
Sbjct: 370 GALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPA 427

Query: 351 VDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409
           VDPL S SR+        +       +  ++  ++  +DI  I G     +      V +
Sbjct: 428 VDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVAR 486

Query: 410 VPIIYDFLKQS 420
              I  FL Q 
Sbjct: 487 ARKIQRFLSQP 497


>gi|302747534|gb|ADL63248.1| Atp1 [Menispermum canadense]
          Length = 349

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 146/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
               S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 AMEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++  +SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|42558316|gb|AAS19867.1| ATP synthase beta chain [Chrysogrammitis musgraveana]
          Length = 422

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT + +V V   +  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITFIQAVYVPAGDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|88807398|ref|ZP_01122910.1| ATP synthase subunit B [Synechococcus sp. WH 7805]
 gi|88788612|gb|EAR19767.1| ATP synthase subunit B [Synechococcus sp. WH 7805]
          Length = 487

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 185/420 (44%), Gaps = 25/420 (5%)

Query: 22  QGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICP 74
             G +  +      V   +  +  + + +  +G N+         +V ++  D  V    
Sbjct: 11  TNGVVRQVIGPVLDVEFPAGKLPKILNALRIEGTNTAGQPVALTAEVQQLLGDHRVRAVA 70

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G      G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 71  MSGTDGLVRGMEALDTGAPISVPVGEATLGRIFNVLGEPVDEQGPVNAS-ATAPIHRSAP 129

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
                +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S
Sbjct: 130 KLTELETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVS 189

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +  E++              K  +     +E P  R    L+A+T+A
Sbjct: 190 VFGGVGERTREGNDLYEEFKDSGVINAEDLSKSKVALCYGQMNEPPGARMRVGLSALTMA 249

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           E+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 250 EHFRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TS 307

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
             +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 308 TLEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML 367

Query: 362 DKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             A    D  K   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 368 QPAVVGEDHYKTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRIVDRARKIEKFLSQP 426


>gi|326502400|dbj|BAJ95263.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528609|dbj|BAJ97326.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 551

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 103/415 (24%), Positives = 181/415 (43%), Gaps = 20/415 (4%)

Query: 22  QGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEE 80
             G +  +      V        +   +     +   + +V   +  ++V    +   E 
Sbjct: 80  SVGQVCQVIGAVVDVRFDDGLPPILTALEVLDNSIRLVLEVAQHLGENVVRTIAMDGTEG 139

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR+IN +G+PID    + K +  + I  + P  + + 
Sbjct: 140 LVRGQKVLNTGSPITVPVGRATLGRIINVIGEPIDHKGDI-KTNSYLPIHREAPAFVEQA 198

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 199 TEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 258

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+AE+F  
Sbjct: 259 ERTREGNDLYREMIESGVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRD 318

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 319 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 376

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 377 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVL 436

Query: 367 A-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 437 GQEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDD-KLTVARARKIQRFLSQP 490


>gi|291521850|emb|CBK80143.1| ATP synthase F1 subcomplex beta subunit [Coprococcus catus GD/7]
          Length = 466

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 182/406 (44%), Gaps = 13/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYVC-LGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G I  +      V      +  + D +         + +    I    V    +   E +
Sbjct: 4   GKIVQVMGPVVDVEFEDDDLPYIKDALEVDNNGQKCIMEASQHIGNHTVRCVMLSASEGL 63

Query: 82  SLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
                V    G  ++       GR+ N  G+ IDG + L   +    I    P   ++  
Sbjct: 64  YRDMEVIAPGGGIKVPVGEQTLGRLFNVTGETIDGGEELKDVE-KWSIHRDPPAFEDQNP 122

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197
           V +  +TGI+VID+  P   G +IG+F G+G+GK+ L+    R+   +    S+   VGE
Sbjct: 123 VAEVLETGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELIRNIAAEHGGYSIFTGVGE 182

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +     + +K+ +V    +E P  R     T +T+AEYF  +   NVLL 
Sbjct: 183 RSREGNDLWSEMKASGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHRNVLLF 242

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF+ +  E++   G +P A GY  ++ +E+  L ERI     + G +T+V +V V
Sbjct: 243 IDNIFRFSQAGSEVSALLGRMPSAVGYQPTLATEMGELQERIA--STKNGAVTSVQAVYV 300

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVS 374
             D+  DP   +  + LD   VL+R + E+G YP VDPL S SR+ +      +  ++  
Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEPDIVGEEHYEVAR 360

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +  ++  +++ +DI  I G     D      V++   I  FL Q 
Sbjct: 361 KVQEILQSYKDLQDIIAILGMEELSDED-KITVYRARKIQKFLSQP 405


>gi|116494662|ref|YP_806396.1| F0F1 ATP synthase subunit beta [Lactobacillus casei ATCC 334]
 gi|191638161|ref|YP_001987327.1| F0F1 ATP synthase subunit beta [Lactobacillus casei BL23]
 gi|239631737|ref|ZP_04674768.1| ATP synthase subunit beta [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066221|ref|YP_003788244.1| F0F1-type ATP synthase subunit beta [Lactobacillus casei str.
           Zhang]
 gi|122263917|sp|Q03A18|ATPB_LACC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|226740211|sp|B3WDL8|ATPB_LACCB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|116104812|gb|ABJ69954.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus casei ATCC
           334]
 gi|190712463|emb|CAQ66469.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1
           sector subunit beta) [Lactobacillus casei BL23]
 gi|239526202|gb|EEQ65203.1| ATP synthase subunit beta [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438628|gb|ADK18394.1| F0F1-type ATP synthase, beta subunit [Lactobacillus casei str.
           Zhang]
 gi|327382192|gb|AEA53668.1| F1F0-ATPase subunit beta [Lactobacillus casei LC2W]
          Length = 488

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 180/381 (47%), Gaps = 11/381 (2%)

Query: 48  FVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRV 105
             V +   S  + +V + +   ++    +   + +     V   G    +       GRV
Sbjct: 33  LTVAKKDGSQLVLEVALELGDGVMRTIAMDSTDGLQRNMAVQDTGGPISVPVGKDTLGRV 92

Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165
            N LG PIDG ++ G       I    P   +     +  +TGI+VID+  P   G ++G
Sbjct: 93  FNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGGKVG 152

Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-KKSVVVV 221
           +F G+G+GK+ L+     +   +   IS+   VGER RE  +   +     + + + +V 
Sbjct: 153 LFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENTAMVF 212

Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVAR 280
              +E P  R    LT +TIAEYF      +VLL +D+I RF  +  E++   G +P A 
Sbjct: 213 GQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 272

Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340
           GY  ++ +E+ +L ERI  +  +KG++T++ ++ V  D++ DP   +  + LD    L R
Sbjct: 273 GYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLER 330

Query: 341 SLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399
            L E+G YP VDPL +S S L  +    +  K+ + +  ++ R+ E +DI  I G     
Sbjct: 331 RLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDIISILGMDELS 390

Query: 400 DLILDKAVHQVPIIYDFLKQS 420
           D      V +   I  FL Q+
Sbjct: 391 DEE-KVVVARARRIQFFLSQN 410


>gi|303231155|ref|ZP_07317893.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-049-V-Sch6]
 gi|302514062|gb|EFL56066.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-049-V-Sch6]
          Length = 474

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 185/411 (45%), Gaps = 17/411 (4%)

Query: 24  GYISSITSVYYTVTCLSQY--VCLGDFVV-HQGKNSDNLGQVIR----INLDIVYICPVG 76
           G +  +      V   + +         + H  K  D    V+     +  D+V    + 
Sbjct: 6   GKVVQVIGPVVDVRFEAGHLPAIYNAIHIYHDHKAHDRQKIVVEVMQHLGDDMVRCVAMS 65

Query: 77  IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + ++ G      G    +       GR+ N LG+ +D D +    D    I    P  
Sbjct: 66  STDGMTRGMEAEDTGAAISVPVGEGVLGRIFNVLGETVDHDSAPVVADEMWPIHRPAPKF 125

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---II 192
            +     +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     +   +     + 
Sbjct: 126 DDLSPDTQILETGIKVVDLIAPYVKGGKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVF 185

Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250
           S VGER RE  +   +      + K+ +V    +E P  R    LT +T+AEYF   K  
Sbjct: 186 SGVGERTREGNDLWNEMKESGVINKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQ 245

Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310
           +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +  ++G+IT+V
Sbjct: 246 DVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLANDVGALQERI--TSTKEGSITSV 303

Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370
            +V V  D+  DP   +  + LD   VL+RS+AE G YP VDPL S SR+ D     DE 
Sbjct: 304 QAVYVPADDLTDPAPAATFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPHILGDEH 363

Query: 371 K-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             +   +  ++ ++ + +DI  I G     D      V +   I  FL Q 
Sbjct: 364 YNVARGVQEVLQKYRDLQDIIAILGMEELSDED-KLTVSRARKIQRFLSQP 413


>gi|42558346|gb|AAS19882.1| ATP synthase beta chain [Grammitis hookeri]
          Length = 422

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMSAVDTGAPLSVPVGETTLGRIFNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSNAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+ L++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVLITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT + +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGLLQERI--TSTKEGSITFIQAVYVPADDLTDPAPATTSAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


>gi|157694077|ref|YP_001488539.1| F0F1 ATP synthase subunit beta [Bacillus pumilus SAFR-032]
 gi|166990366|sp|A8FIB2|ATPB_BACP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|157682835|gb|ABV63979.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Bacillus
           pumilus SAFR-032]
          Length = 473

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 103/366 (28%), Positives = 173/366 (47%), Gaps = 10/366 (2%)

Query: 62  VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120
            + +  D V    +   + +  G      G+   +       GRV N LG  ID D+ LG
Sbjct: 51  ALHLGDDTVRTIAMASTDGVKRGMEAVDLGKPISVPVGNVTLGRVFNVLGDNIDLDEPLG 110

Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180
                  I  + P         +  +TGI+V+D+  P   G +IG+F G+G+GK+ L+  
Sbjct: 111 VEAQRDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQE 170

Query: 181 FARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236
              +   +     + + VGER RE  +   +      ++K+ +V    +E P  R    L
Sbjct: 171 LINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVIEKTAMVFGQMNEPPGARMRVAL 230

Query: 237 TAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           T +T+AE+F  + G +VL  +D+I RF  +  E++   G +P A GY  ++ +E+ +L E
Sbjct: 231 TGLTMAEHFRDELGQDVLFFIDNIYRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQE 290

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +    G++T++ ++ V  D++ DP   +  + LD    L R L E G YP VDPLA
Sbjct: 291 RI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLA 348

Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S SR LA +    +   +   +   + R++E +DI  I G     +      VH+   + 
Sbjct: 349 STSRALAPEIVGEEHYAIAREVQQTLQRYKELQDIIAILGMDELSEDD-KLVVHRARRVQ 407

Query: 415 DFLKQS 420
            FL Q+
Sbjct: 408 FFLSQN 413


>gi|315641266|ref|ZP_07896343.1| ATP synthase F1 sector beta subunit [Enterococcus italicus DSM
           15952]
 gi|315483033|gb|EFU73552.1| ATP synthase F1 sector beta subunit [Enterococcus italicus DSM
           15952]
          Length = 468

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 115/414 (27%), Positives = 187/414 (45%), Gaps = 18/414 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGD----FVVHQGKNSDN---LGQVIRINLDIVYIC 73
           +  G I  +      V   S    L D     VV++   S     L   + +   ++   
Sbjct: 1   MSSGKIVQVIGPVVDVE-FSLDESLPDINNALVVYKNDASKTKVVLEAALELGDGVIRAI 59

Query: 74  PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132
            +   + +  G  V   G    +       GRV N LG+ ID  +   K      I    
Sbjct: 60  AMESTDGLQRGMEVVDTGESISVPVGKETLGRVFNVLGETIDLQEPFPKDAQRSGIHKPA 119

Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192
           P         +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   I
Sbjct: 120 PNFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGI 179

Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248
           S+   VGER RE  +   +      ++K+ +V    +E P  R    LT +TIAEYF   
Sbjct: 180 SVFTGVGERTREGNDLYNEMRESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDV 239

Query: 249 G-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ +L ERI  +  +KG++
Sbjct: 240 EGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSV 297

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA-SVSRLADKAWS 366
           T++ ++ V  D++ DP   +  + LD    L R L E+G YP VDPLA S S LA +   
Sbjct: 298 TSIQAIYVPADDYTDPAPATAFAHLDATTNLERKLTEQGIYPAVDPLASSSSALAPEIVG 357

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
               ++ + + H + R+ E +DI  I G     +      V +   I  FL Q+
Sbjct: 358 EQHYQVATEVQHTLQRYRELQDIIAILGMDELSEDE-KVLVSRARRIQFFLSQN 410


>gi|154424893|emb|CAL18549.1| ATP synthase alpha subunit [Streptococcus salivarius]
          Length = 355

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 152/351 (43%), Gaps = 10/351 (2%)

Query: 43  VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACW 101
              G+ +  +       G    +  + V I  +G    I  GD+V   G+   +      
Sbjct: 8   AMSGELLEFENG---AYGMAQNLETNDVGIIILGDFVAIREGDIVKRTGKIMEVPVGEAL 64

Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161
            GRV+N LG+P+DG   +        + +  P  M R+ V +  +TG++ ID   P+  G
Sbjct: 65  IGRVVNPLGQPVDGLGDIETTGFR-PVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRG 123

Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGREVREFIEDYLGDNL-KKSV 218
           QR  V      GK+++      +        I   +G++   VR  +E          ++
Sbjct: 124 QRELVIGDRQTGKTSVAIDAILNQKGQDMICIYVAIGQKESTVRTQVETLRKHGALDYTI 183

Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
           VV A++ +   L  +AP   V +AE F   G +VL++ D +++ A + RE++      P 
Sbjct: 184 VVTASASQPSPLLYIAPYAGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPG 243

Query: 279 ARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
              YP  VF    RLLER      +   G+ITA+  +     + +  IA +V SI DG I
Sbjct: 244 REAYPGDVFYLHSRLLERSAKVSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQI 303

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387
            L  +L   G  P +D  +SVSR+   A     KK+  +L   +  + E  
Sbjct: 304 FLQENLFNSGIRPAIDAGSSVSRVGGSAQIKAMKKVAGTLRLDLASYRELE 354


>gi|302747426|gb|ADL63194.1| Atp1 [Decaisnea fargesii]
          Length = 349

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++  +SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|149384673|gb|ABR25145.1| ATP synthase beta chain [Lygodium reticulatum]
          Length = 426

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 164/370 (44%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   + ++ G  V   G    +       GR+ N LG+P+D    + +G 
Sbjct: 1   LGNNEVRAVAMSATDGLTRGMGVTDTGAPLSVPVGEITLGRIFNVLGEPVDNLGPV-EGG 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGSFGGAGVGKTVLIMELIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNVSESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
              LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  +  D   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTFAHSDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S +        +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDESSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  F  Q 
Sbjct: 357 RKIERFSSQP 366


>gi|115379930|ref|ZP_01466987.1| ATP synthase F1, beta subunit [Stigmatella aurantiaca DW4/3-1]
 gi|115363055|gb|EAU62233.1| ATP synthase F1, beta subunit [Stigmatella aurantiaca DW4/3-1]
          Length = 421

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 176/365 (48%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E ++ G  V + G   ++       GR++N +G P+D    +     +  I
Sbjct: 2   VRCISMDSTEGLARGQAVKNTGAPIQVPVGKGTLGRILNVIGAPVDERGPI-TSQQTWPI 60

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P  + +    + F+TGI+VID+  P   G +IG+F G+G+GK+ LL    R+   +
Sbjct: 61  HRPAPTFVEQDVRVQAFETGIKVIDLLGPYTRGGKIGLFGGAGVGKTVLLMELIRNVAKE 120

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
           +    + + VGER RE  +   +    N          + V+V    +E P  R    L+
Sbjct: 121 RGGFSVFAGVGERTREGNDLYHEMQEGNVINTKNLEESQCVLVYGQMNEPPGARARVALS 180

Query: 238 AVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+TIAEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 181 ALTIAEYFRDVEGRDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGALQER 240

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +   KG++T+V ++ V  D+  DP   +  + LD   VLNR+++E G YP VDPL S
Sbjct: 241 I--TSTNKGSVTSVQAIYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDS 298

Query: 357 VSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            SR+ D      +   +   +  ++ +++E +DI  I G     +      V +   I  
Sbjct: 299 TSRILDPNVVGPEHYAVARKVQGILQKYKELQDIIAILGMDELSEAD-KLTVARARKIQK 357

Query: 416 FLKQS 420
           FL Q 
Sbjct: 358 FLSQP 362


>gi|71370834|gb|AAZ30646.1| ATP synthase beta subunit [Cerebratulus lacteus]
          Length = 427

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 108/386 (27%), Positives = 175/386 (45%), Gaps = 20/386 (5%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +    V    +   E +  G      G   RI       GR+IN +G+PID    +   D
Sbjct: 26  LGESTVRTIAMDGTEGLVRGQKCQDTGHPIRIPVGPETLGRIINVIGEPIDERGPV-PTD 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
               I ++ P  +     ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  KRASIHAEAPEFVEMSVQQEILATGIKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D+  K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVINLKDDSSKVSLVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF  +   +VLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +   KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VD
Sbjct: 265 MQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVD 322

Query: 353 PLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D     +E   +   +  ++  +   +DI  I G     +      V +  
Sbjct: 323 PLDSTSRILDPNIVGEEHYTIARGVQKILQNYRSLQDIIAILGMDELSEED-KLTVSRAR 381

Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437
            I  FL Q        +VF     KL
Sbjct: 382 KIMKFLSQP---FQVAEVFTGSAGKL 404


>gi|290745935|gb|ADD51634.1| ATP synthase beta chain [Terpsichore dilatata]
          Length = 411

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 26/389 (6%)

Query: 54  KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104
           K  +  GQ I +  ++        V    +   + ++ G      G    +       GR
Sbjct: 16  KGQNPAGQQINVTCEVQQLLGNNEVRAVAMSATDGLTRGMHAVDTGAPLSVPVGETTLGR 75

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           + N LG+P+D    +    +S  I    P           F+TGI+V+D+  P   G +I
Sbjct: 76  ISNVLGEPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKI 134

Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN-------- 213
           G+F G+G+GK+  ++    +       +S+ G   ER RE  +   +             
Sbjct: 135 GLFGGAGVGKTVPITESINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNIS 194

Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272
             K  +V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++  
Sbjct: 195 ESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 254

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332
            G +P A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + L
Sbjct: 255 LGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHL 312

Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRL 391
           D   VL+R LA +G YP VDPL S S +        +  +    +   + R++E +DI  
Sbjct: 313 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIA 372

Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           I G     +      V +   I  FL Q 
Sbjct: 373 ILGLDELSEED-RLTVARARKIERFLSQP 400


>gi|269138233|ref|YP_003294933.1| type III secretion system ATPase [Edwardsiella tarda EIB202]
 gi|61743018|gb|AAX55238.1| EsaN [Edwardsiella tarda]
 gi|267983893|gb|ACY83722.1| type III secretion system ATPase [Edwardsiella tarda EIB202]
 gi|304558276|gb|ADM40940.1| EsaN [Edwardsiella tarda FL6-60]
          Length = 438

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 153/409 (37%), Positives = 225/409 (55%), Gaps = 12/409 (2%)

Query: 20  VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79
           V   G + ++ +           V LG+       +     +V+ I  D   + P     
Sbjct: 24  VRLEGRLLTVGATLLRAHL--PGVGLGEQCTLPDGSP---AEVVAIEGDQALLSPYHAPL 78

Query: 80  EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138
            ++ G LV   G + RI       GRVI+ALG+P+DG     +      + S  P  M R
Sbjct: 79  GLANGMLVTPSGAQARIGVGEALLGRVIDALGQPMDGCAP-PQAAQWRSLESPAPDPMQR 137

Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198
             ++     G+R ID    +  GQR+G+F+ +G GKSTLL M A     D V+++L+GER
Sbjct: 138 APIDTLLPMGVRAIDAALSVGVGQRLGIFSPAGCGKSTLLGMLAAHSQVDVVVLALIGER 197

Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257
           GREVREFI +    +   +SVV++ATSD   + R  A  TA  IAEYF  +G +VLL++D
Sbjct: 198 GREVREFIEQIMSPELRARSVVILATSDRPALERIKAADTATVIAEYFRDRGHHVLLLVD 257

Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317
           S+TR+A +IREIA  +GE  V+ GYP S+++ LPRLLER GP+    G+ITA  +VLV+ 
Sbjct: 258 SLTRYARAIREIALAAGEPMVSGGYPPSLYARLPRLLERAGPAA--CGSITAFYTVLVEQ 315

Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377
              +DP+A+ VRS+LDGHIVL+R LAE   YP +D LAS+SR+  +  +   ++  + L 
Sbjct: 316 K--SDPLAEEVRSLLDGHIVLSRRLAEASHYPAIDILASISRVMSQVVTPQHRQAANRLR 373

Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426
           HL+  ++E   +  +G YR G D   D A+ +   I   L Q   +   
Sbjct: 374 HLLATWQEIALLVRVGEYRAGQDADADDAMARREAIASLLCQQTDERCP 422


>gi|34499992|gb|AAQ73578.1| ATP synthase beta subunit [Gallibacterium genomosp. 1]
          Length = 444

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 110/410 (26%), Positives = 183/410 (44%), Gaps = 19/410 (4%)

Query: 21  VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR----INLDIVYICPVG 76
           +  G I  I      V      V      V++  N +  G V+     +   IV    +G
Sbjct: 1   MATGKIVQIIGAVIDVEFPQDAVP----KVYEALNVET-GLVLEVQQQLGGGIVRCIAMG 55

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G  V + G    +       GR++N LG+PID    +G+ +    I    P  
Sbjct: 56  SSDGLKRGLSVTNTGSPISVPVGTETLGRIMNVLGEPIDERGPIGEKE-RWSIHRAAPSY 114

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VII 192
             +    +  +TGI+VID+  P   G ++G+F G+G+GK+  +    R+   +     + 
Sbjct: 115 EEQANSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVF 174

Query: 193 SLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251
           + VGER RE  +F  +    N+  K  +V    +E P  R    LT +T+AE F  +G +
Sbjct: 175 AGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRD 234

Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311
           VL  +D+I R+  +  E++   G +P A GY  ++  E+  L ERI  +  + G+IT+V 
Sbjct: 235 VLFFVDNIYRYTRAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSNKTGSITSVQ 292

Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEK 370
           +V V  D+  DP   +  + LD  +VL+R +A  G Y     L S SR  D      +  
Sbjct: 293 AVYVPADDLTDPSPATTFAHLDSTVVLSRQIASLGIYLRWIRLDSTSRQLDPQVVGQEHY 352

Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   +  ++ R++E +DI  I G     +      V +   I  FL Q 
Sbjct: 353 DVARGVQGILQRYKELKDIIAILGMDELSEED-KLVVARARKIERFLSQP 401


>gi|302747554|gb|ADL63258.1| Atp1 [Nandina domestica]
          Length = 349

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRGTSESDTLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G+ TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSSTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++  +SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGSSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|290745863|gb|ADD51601.1| ATP synthase beta chain [Lellingeria simacensis]
          Length = 404

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 22  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRIFNVLG 81

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 82  EPVDNLGPVRSSVIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 140

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  ++    +       +S+ G   ER RE  +   +               K  +
Sbjct: 141 GVGKTVPITESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 200

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R     TA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 201 VYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 260

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 261 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSAHLDATTVL 318

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 319 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 378

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 379 LSEED-RLTVARARKIERFLSQP 400


>gi|302747430|gb|ADL63196.1| Atp1 [Dioncophyllum tholloni]
          Length = 349

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G    +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIAFNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V S
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIS 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQ 349


>gi|148240336|ref|YP_001225723.1| F0F1 ATP synthase subunit beta [Synechococcus sp. WH 7803]
 gi|166222422|sp|A5GNB1|ATPB_SYNPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|147848875|emb|CAK24426.1| ATP synthase beta chain [Synechococcus sp. WH 7803]
          Length = 487

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 25/418 (5%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI-VYICPVG 76
           G +  +      V   +  +  + + +  +G N+         +V ++  D  V    + 
Sbjct: 13  GVVRQVIGPVLDVEFPAGKLPKILNALRIEGTNTAGQPVALTAEVQQLLGDHRVRAVAMS 72

Query: 77  IGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135
             + +  G      G    +       GR+ N LG+P+D    +     +  I    P  
Sbjct: 73  GTDGLVRGMEALDTGAPISVPVGEATLGRIFNVLGEPVDEQGPVNAS-ATAPIHRSAPKL 131

Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195
              +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   +   +S+ 
Sbjct: 132 TELETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVF 191

Query: 196 G---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244
           G   ER RE  +  E++              K  +     +E P  R    L+A+T+AE+
Sbjct: 192 GGVGERTREGNDLYEEFKDSGVINAEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEH 251

Query: 245 FSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303
           F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  +   
Sbjct: 252 FRDVNKQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTL 309

Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363
           +G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +   
Sbjct: 310 EGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQP 369

Query: 364 AWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           A    +  K   ++   + R++E +DI  I G     +    + V +   I  FL Q 
Sbjct: 370 AVVGEEHYKTARAVQSTLQRYKELQDIIAILGLDELSEDD-RRTVDRARKIEKFLSQP 426


>gi|124026543|ref|YP_001015658.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str.
           NATL1A]
 gi|166201725|sp|A2C4I4|ATPB_PROM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|123961611|gb|ABM76394.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. NATL1A]
          Length = 488

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 110/426 (25%), Positives = 189/426 (44%), Gaps = 25/426 (5%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSD-----NLGQVIRINLDI 69
           +   V   G +  +      V   +  +  + + +  +GKN          +V ++  D 
Sbjct: 5   ATATVGTKGIVRQVIGPVLDVEFPAGKLPSILNALRIEGKNPAGQDVALTAEVQQLLGDH 64

Query: 70  -VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127
            V    +   + +  G      G    +       GR+ N LG+P+D    L K   +  
Sbjct: 65  RVRAVAMSGTDGLVRGMEALDTGAPISVPVGEATLGRIFNVLGEPVDEQGDL-KNVTTSP 123

Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187
           I    P   + +   K F+TGI+VID+  P   G ++G+F G+G+GK+ L+     +   
Sbjct: 124 IHRSAPSLTDLETKPKVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINNIAK 183

Query: 188 DKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPL 236
           +   +S+ G   ER RE  +  E++              K  +     +E P  R    L
Sbjct: 184 EHGGVSVFGGVGERTREGNDLYEEFKESGVINSEDLTKSKVALCFGQMNEPPGARMRVGL 243

Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
           +A+T+AE+F      +VLL +D+I RF  +  E++   G +P A GY  ++ +++  L E
Sbjct: 244 SALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGELQE 303

Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355
           RI  +   +G+IT++ +V V  D+  DP   +  + LD   VL R+LA +G YP VDPL 
Sbjct: 304 RI--TSTLEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPLD 361

Query: 356 SVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414
           S S +   +   D   +   ++   + R++E +DI  I G     +    K V +   I 
Sbjct: 362 STSTMLQPSVVGDEHYRTARAVQSTLQRYKELQDIIAILGLDELSEED-RKTVDRARKIE 420

Query: 415 DFLKQS 420
            FL Q 
Sbjct: 421 KFLSQP 426


>gi|218147|dbj|BAA01372.1| mitochondrial F1-ATPase beta subunit [Oryza sativa Japonica Group]
          Length = 551

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 24/415 (5%)

Query: 24  GYISSITSVYYTV---TCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80
           G +  +      V     L   +   + + H  +    + Q +    ++V    +   E 
Sbjct: 81  GQVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLG--ENMVRTIAMDGTEG 138

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G  V + G    +       GR++N +G+PID    +      + I  + P  + + 
Sbjct: 139 LVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHF-LPIHREAPAFVEQA 197

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVG 196
             ++   TGI+V+D+  P   G +IG+F G+G+GK+ L+     +         + + VG
Sbjct: 198 TEQQILVTGIKVVDLVAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVG 257

Query: 197 ERGREVREFIEDYLGDN---------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247
           ER RE  +   + +              K  +V    +E P  R    LT +T+A +F  
Sbjct: 258 ERTREGNDLYREMIESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAVHFRD 317

Query: 248 KG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306
               +VLL +D+I RF  +  E++   G +P A GY  ++ ++L  L ERI  +  +KG+
Sbjct: 318 AEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGS 375

Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AW 365
           IT+V ++ V  D+  DP   +  + LD   VL+R ++E G YP VDPL S SR+      
Sbjct: 376 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVL 435

Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
             D       +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 436 GEDHYNTARGVQRVLQNYKNLQDIIAILGMDELSEDD-RLTVRRARKIQRFLSQP 489


>gi|302747480|gb|ADL63221.1| Atp1 [Heisteria parvifolia]
          Length = 349

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 147/352 (41%), Gaps = 19/352 (5%)

Query: 46  GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104
           G+ V      S   G  + +  + V I   G    I  GDLV   G     P      GR
Sbjct: 2   GEMVEFA---SGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGR 58

Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164
           V++ALG PIDG  +L   +    +  K P  + R+ V +  +TG++ +D   P+  GQR 
Sbjct: 59  VVDALGVPIDGRGALSDHE-RRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRE 117

Query: 165 GVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYLGDN 213
            +      GK+ +      +                 +   +G++   V + ++     N
Sbjct: 118 LIIGDRQTGKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEAN 177

Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272
             + S++V AT+ +   L+ +AP +   + EYF   G + L+I D +++ A + R+++  
Sbjct: 178 ALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLL 237

Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRS 330
               P    +P  VF    RLLER      +   G++TA+  +     + +  I  +V  
Sbjct: 238 LRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVIP 297

Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382
           I DG I     L   G  P ++   SVSR+   A     K++  S    + +
Sbjct: 298 ITDGQICSETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVRGSSKLELAQ 349


>gi|255556745|ref|XP_002519406.1| ATP synthase beta subunit, putative [Ricinus communis]
 gi|223541473|gb|EEF43023.1| ATP synthase beta subunit, putative [Ricinus communis]
          Length = 424

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 103/402 (25%), Positives = 175/402 (43%), Gaps = 28/402 (6%)

Query: 24  GYISSITSVYYTVTCL-SQYVCLGDFVVHQGKNSDNLGQVIRINLDI--------VYICP 74
           G I+ I      V     +   + + +V +G   D +GQ I +  ++        V    
Sbjct: 21  GRITQIIGPVLDVAFPPGKMPNIYNALVVKG--RDTVGQEINVTCEVQQLLGNNRVRAVA 78

Query: 75  VGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133
           +   + +  G  V   G    +       GR+ N LG+P+D    +     +  I    P
Sbjct: 79  MSATDGLMRGMEVIDTGGPLSVPVGGATLGRIFNVLGEPVDDLGPVD-TRATSPIHRSAP 137

Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193
             +        F+TGI+V+D+  P   G +I +F G+G+GK+ L+     +       +S
Sbjct: 138 AFIQLDTKLSIFETGIKVVDLLAPYRRGGKIRLFGGAGVGKTVLIMELINNIAKAHGGVS 197

Query: 194 LVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIA 242
           + G   ER RE  +   +               K  +V    +E    R    LTA+T+A
Sbjct: 198 VFGGVGERTREGNDLYMEMKKSGVINEENIAESKVALVYGQMNEPSGARMRVGLTALTMA 257

Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
           +YF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  + 
Sbjct: 258 KYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TS 315

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S + 
Sbjct: 316 TKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML 375

Query: 362 DK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402
                  +  +    +   + R++E +DI  I G     +  
Sbjct: 376 QPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEED 417


>gi|118411012|ref|YP_874407.1| ATP synthase CF1 beta chain [Phaeodactylum tricornutum]
 gi|125987719|sp|A0T0D2|ATPB_PHATC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName:
           Full=ATP synthase F1 sector subunit beta; AltName:
           Full=F-ATPase subunit beta
 gi|116739759|gb|ABK20630.1| ATP synthase CF1 beta chain [Phaeodactylum tricornutum]
          Length = 475

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 183/414 (44%), Gaps = 21/414 (5%)

Query: 24  GYISSITSVYYTVTCLSQYVC--LGDFVVHQGKNSDNLGQVIRINLDI-VYICPVGIGEE 80
           GY++ I      +      +        +    N++ + +V ++  D  V    +   + 
Sbjct: 9   GYVTQIIGPVLDIKFSEGNLPPIYSAIKIILDDNTETIVEVQQLLGDNKVRAVSMRSTDG 68

Query: 81  ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139
           +  G      G    +       GR+ N +G+P+D    + K D ++ I    P     +
Sbjct: 69  LKRGVEAIDLGTPINVPVGTPTLGRIFNVIGEPVDEQGEV-KYDETLPIHRDAPAFTELE 127

Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG--- 196
                F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     +       +S+ G   
Sbjct: 128 TKPSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG 187

Query: 197 ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247
           ER RE  +  E+               K  +V    +E P  R    LTA+T+AEYF   
Sbjct: 188 ERTREGNDLYEEMKESGVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 247

Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307
              +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +   +G+I
Sbjct: 248 NKQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSI 305

Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWS 366
           T++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S S +      +
Sbjct: 306 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQVGIVT 365

Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +      ++   + R++E +DI  I G     +      V +   +  FL Q 
Sbjct: 366 EEHYATAENVKETLQRYKELQDIIAILGIDELSEED-RLTVARARKVERFLSQP 418


>gi|46909239|gb|AAT06137.1| ATP synthase beta subunit [Dendraster excentricus]
          Length = 427

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 111/403 (27%), Positives = 185/403 (45%), Gaps = 21/403 (5%)

Query: 49  VVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVI 106
           +  QG+ S  + +V   +  + V    +   E +  G      G    I       GR++
Sbjct: 9   LEVQGRTSRLVLEVAQHLGENTVRTIAMDGTEGLVRGQRCVDSGTPISIPVGPETLGRIM 68

Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166
           N +G+PID    +   D    I ++ P  +     ++   TGI+V+D+  P   G +IG+
Sbjct: 69  NVIGEPIDERGPI-PTDKRAAIHAEAPEFVEMSVAQEILVTGIKVVDLLAPYAKGGKIGL 127

Query: 167 FAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKK 216
           F G+G+GK+ L+     +         + + VGER RE  +   + +        D+  K
Sbjct: 128 FGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVISLKDDTSK 187

Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275
             +V    +E P  R    LT +T+AEYF  +   +VLL +D+I RF  +  E++   G 
Sbjct: 188 VALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGR 247

Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335
           +P A GY  ++ +++  + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD  
Sbjct: 248 IPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDAT 305

Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGG 394
            VL+R +AE G YP VDPL S SR+ D     +   K+  S+  ++   +  +DI  I G
Sbjct: 306 TVLSRGIAELGIYPAVDPLDSTSRIMDPNIVGERHYKVARSVQKILQDNKTLQDIIAILG 365

Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437
                +      V +   I  FL Q        +VF     KL
Sbjct: 366 MDELSEDD-KLTVSRARKIQRFLSQP---FQVAEVFTGSPGKL 404


>gi|301320724|gb|ADK69367.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 475

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 112/406 (27%), Positives = 183/406 (45%), Gaps = 14/406 (3%)

Query: 24  GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQV-IRINLDIVYICPVGIGEEI 81
           G +  +      V      +  + D ++        + +V   I  +IV    +G  E +
Sbjct: 16  GKVIQVLGPVVDVKFSENSIPKIYDALIVDNNGKKLVLEVEQNIGDEIVRTIAMGPTEGL 75

Query: 82  SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140
             G  V +              GR+ N LG PID    L        I    P       
Sbjct: 76  KRGLDVINTNSPITAPTGMEVLGRMFNVLGDPIDEKPDLDV--KREPIHKDAPKYEELVT 133

Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGE 197
             +  +TGI+VID+  P   G ++G+F G+G+GK+ L+     +         + + VGE
Sbjct: 134 TTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNIAKAHNGVSVFAGVGE 193

Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255
           R RE  +   +++   +  K+ +V    +E P  R    LT +TIAEYF  +   +VLL 
Sbjct: 194 RTREGNDLYHEFIEAGVLNKTCLVFGQMNEPPGARMRVALTGLTIAEYFRDQKNMDVLLF 253

Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315
           +D+I RF  +  E++   G +P A GY  ++ +E+  L ERI  +  + G+IT+V +V V
Sbjct: 254 IDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSVQAVYV 311

Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVS 374
             D+  DP   +  + LD  IVL+RS+A  G YP VDPLAS SR+ D      +   +  
Sbjct: 312 PADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASSSRVLDPEIVGQEHYDIAL 371

Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
            +   + ++++ + I  I G     +      V +   I +FL QS
Sbjct: 372 RVQIALQKYQDLQSIIAILGMDELSEED-KLIVQRARKIRNFLSQS 416


>gi|296127615|ref|YP_003634867.1| ATP synthase F1, beta subunit [Brachyspira murdochii DSM 12563]
 gi|296019431|gb|ADG72668.1| ATP synthase F1, beta subunit [Brachyspira murdochii DSM 12563]
          Length = 470

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 178/379 (46%), Gaps = 12/379 (3%)

Query: 50  VHQGKNSDNLGQVIR-INLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVIN 107
             +G     + +V + +    V    +   + IS GD +F       +       GR+ N
Sbjct: 38  EIEGVKRHIICEVQQHLGGGRVRAIALESTDGISRGDDIFDTENHIMVPVGTETIGRIFN 97

Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167
            LG+ +D  + +   +    I +  P     +   + F+TGI+VID+  P   G + G+F
Sbjct: 98  VLGQTVDKGEPVEAKEYR-SIHAAPPKFETLEPKLEIFETGIKVIDLLAPYIKGGKTGLF 156

Query: 168 AGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223
            G+G+GK+ L+     +   +     + + VGER RE  +   +      + K+ +V   
Sbjct: 157 GGAGVGKTVLIMELIHNIASEHGGYSVFAGVGERTREGNDLWSEMKESGVINKTCLVYGQ 216

Query: 224 SDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGY 282
            +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY
Sbjct: 217 MNEPPGARLRVALTALTMAEYFRDSAGLDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGY 276

Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342
             ++ +E+  L ERI  +    G+IT++ +V V  D+  DP   +  + LD   VL+R +
Sbjct: 277 QPTLATEMGGLQERI--TSTRNGSITSIQAVYVPADDLTDPAPATAFTHLDATTVLSREV 334

Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401
           +E+G YP VDPLAS SR+ D      +       + H++ R+ + +DI  I G     + 
Sbjct: 335 SEKGIYPAVDPLASTSRILDPNILGQEHYDTARRVQHILQRYRDLQDIIAILGADELSEE 394

Query: 402 ILDKAVHQVPIIYDFLKQS 420
                V +   I  FL Q 
Sbjct: 395 D-KLVVSRARKIEQFLSQP 412


>gi|119350565|gb|ABL63233.1| AtpB [Uronema belkae]
          Length = 383

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 164/365 (44%), Gaps = 18/365 (4%)

Query: 70  VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128
           V    +   E +  G D V       +       GR+ N LG+P+D    + + +  + I
Sbjct: 5   VRAVAMNPTEGLMRGMDAVDTGKPLMVPVGKPTLGRIFNVLGEPVDNLGPV-ETEQKLPI 63

Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188
               P   +       F+ GI+V+D+  P   G +IG+F G+G+GK+ L+     +    
Sbjct: 64  HRSAPAFTDLDTRLAIFERGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKA 123

Query: 189 KV---IISLVGERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRKMAPLT 237
                + + VGER RE  +   +               K  +V    +E P  R    LT
Sbjct: 124 HGGVSVFAGVGERTREGNDLYMEMKESGVIVESNLSESKVALVYGPMNEPPGARMRVGLT 183

Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296
           A+T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+  L ER
Sbjct: 184 ALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQER 243

Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356
           I  +  + G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP VDPL S
Sbjct: 244 I--TSTKDGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDS 301

Query: 357 VSRLADKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415
            S +       DE   +   +   + R++E +DI  I G     +      V +   I  
Sbjct: 302 TSTMLQPWIVGDEHYGVAQKVKQTLQRYKELQDIIAILGLDELSEED-RLLVARARKIER 360

Query: 416 FLKQS 420
           FL Q 
Sbjct: 361 FLVQP 365


>gi|46909261|gb|AAT06148.1| ATP synthase beta subunit [Mytilus edulis]
          Length = 427

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 174/369 (47%), Gaps = 17/369 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V    +   E +  G      G   RI       GR+IN +G PID    +   D
Sbjct: 26  LGENFVRTIAMDGTEGLVRGTSCIDTGYPIRIPVGPATLGRIINVVGDPIDERGPVN-TD 84

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
             + I ++ P  ++    ++  +TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 85  KYLSIHAEAPDFVDMSVTQEVLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 144

Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLG-------DNLKKSVVVVATSDESPILRKM 233
           +         + + VGER RE  +   + +        D+  K  +V    +E P  R  
Sbjct: 145 NVAKAHGGYSVFAGVGERTREGNDLYHEMITSKVISLTDDTSKVSLVYGQMNEPPGARAR 204

Query: 234 APLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292
             LT +T+AEYF      NVLL +D+I RF  +  E++   G +P A GY  ++ +++  
Sbjct: 205 VALTGLTVAEYFRDVEGQNVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGT 264

Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352
           + ERI  +  +KG+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VD
Sbjct: 265 MQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVD 322

Query: 353 PLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411
           PL S SR+ D      +   +  ++  ++  ++  +DI  I G     +      V +  
Sbjct: 323 PLDSNSRILDPYVVGEEHYTVARNVQKILQNYKSLQDIIAILGMDELSEED-KLTVARAR 381

Query: 412 IIYDFLKQS 420
            I  FL Q 
Sbjct: 382 KIQWFLSQP 390


>gi|170516112|gb|ACB15066.1| ATPase alpha subunit [Lagarostrobos franklinii]
          Length = 358

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 83/361 (22%), Positives = 149/361 (41%), Gaps = 19/361 (5%)

Query: 70  VYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL--GKGDLSM 126
           V I   G    I  GDLV   G    +       GRV++ALG PIDG  +L   KG    
Sbjct: 1   VGIVVFGSDTAIKEGDLVKRTGSIVDVPVGKALLGRVVDALGVPIDGKGALQVDKGAERR 60

Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186
            + +K P  + R+ V +  +TG++ +D   P+  GQR  +      GK+ +      +  
Sbjct: 61  RVEAKAPGIIERKSVHEPPQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAIAIDIILNQK 120

Query: 187 FDK----------VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235
                         +   +G++   V + ++     D L  +++  AT+ +   L+ +AP
Sbjct: 121 RSHLRSGTSDSVYCVYVAIGQKRSTVAQSVQIISEADALGYTIINAATASDPAPLQFLAP 180

Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295
            +   + EY    G + L+I D +++ A + R+++      P    +P  VF    RL E
Sbjct: 181 YSGCAMGEYSRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLSE 240

Query: 296 RIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353
           R      +   G++TA+  +     + +     +V SI DG I L   L   G  P ++ 
Sbjct: 241 RAAKRSDQTGAGSLTALPVIETQAGDVSAYTPTNVISITDGQIRLETELFYRGIRPAINV 300

Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413
             SVSR+   A     K++  SL   + ++ E   +     +   +D       ++   +
Sbjct: 301 GLSVSRVGSAAQLKAMKRVCGSLKPELAQYRE---VAAFAQFGSDLDAATQALSNRGARL 357

Query: 414 Y 414
            
Sbjct: 358 T 358


>gi|221640831|ref|YP_002527093.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides KD131]
 gi|221161612|gb|ACM02592.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides KD131]
          Length = 436

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 168/414 (40%), Positives = 242/414 (58%), Gaps = 2/414 (0%)

Query: 11  LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70
           LAE  +  L  + G ++ I     +V  L Q   LGD V   G      G+V+R++   V
Sbjct: 9   LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68

Query: 71  YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130
            I P G  E +++GD V   G   I+P   W GR+++ LG+P+DG   L +G  +  + +
Sbjct: 69  TILPDGSPEGLAIGDAVALIGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127

Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190
             PPA  R+ +     TG+ V D   PL  GQRIG+FAGSG+GKS+LL+ FARS   D V
Sbjct: 128 AAPPAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187

Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249
           +I LVGERGRE+REF E  LG   + ++VVV ATSD+SP++R+     A+ +AE+F  +G
Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247

Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309
            +VLL++DSITRFA + RE+A   GE    RG+P S    +  L ER GP     G+ITA
Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGADGTGDITA 307

Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369
           V SVLV G +  +P+AD +R +LDGH+V++R +AE GR+P +D L S+SR   +A S  E
Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSMSRALPEAASTAE 367

Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423
             L++    L+  ++    +   G Y  G D ++D A+   P +  FL +   D
Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421


>gi|229587163|ref|YP_002845664.1| F0F1 ATP synthase subunit beta [Rickettsia africae ESF-5]
 gi|259585450|sp|C3PLT1|ATPB_RICAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase
           F1 sector subunit beta; AltName: Full=F-ATPase subunit
           beta
 gi|228022213|gb|ACP53921.1| ATP synthase beta chain [Rickettsia africae ESF-5]
          Length = 473

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 187/420 (44%), Gaps = 20/420 (4%)

Query: 16  SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75
           +KN+      IS++  V +T       + L     +  K+   L     I  D V    +
Sbjct: 2   TKNIGKITQIISAVVDVKFTNNGELPEI-LNALECYNDKHRIVLEVAQHIGDDTVRCIAM 60

Query: 76  GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134
              E +  G  V   G   RI       GR++N +G+PIDG   +   ++S  I    P 
Sbjct: 61  DSMEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNIS-SIYKPAPD 119

Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---I 191
             N+        TGI+VID+  P   G +IG+F G+G+GK+ L+     +         +
Sbjct: 120 FTNQSTERNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTV 179

Query: 192 ISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243
            + VGER RE  +   + +             K  +V    +E P  R    L+ +TIAE
Sbjct: 180 FAGVGERTREGNDLYHEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAE 239

Query: 244 --YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301
                ++G +VL  +D+I RF  +  E++   G +P A GY  ++ +++  L ERI  + 
Sbjct: 240 SFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TS 297

Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361
            + G+IT+V ++ V  D+  DP   +  + LD   VL+R +AE G YP VDPL S S++ 
Sbjct: 298 TKYGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVL 357

Query: 362 DKAWSADEKK-LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420
           D     +E   +   +  ++  ++  +DI  I G     +      V +   I  FL Q 
Sbjct: 358 DPMIVGEEHYSVARQVQQVLQTYKSLQDIITILGMDELSEED-KLTVARARKIQRFLSQP 416


>gi|149798713|gb|ABR32047.1| ATP synthase beta chain [Paragymnopteris marantae]
          Length = 426

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 18/370 (4%)

Query: 65  INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123
           +  + V        + +  G      G    +       GR+ N LG+P+D    + +  
Sbjct: 1   LGNNEVRAVATSATDGLMRGMGAVDTGAPLSVPVGETTLGRIFNVLGEPVDNLGPV-RNS 59

Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183
            +  I    P           F+TGI+V+D+  P   G +IG+F G+G+GK+ L+     
Sbjct: 60  TTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMESIN 119

Query: 184 SDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVVVVATSDESPILRK 232
           +       +S+ G   ER RE  +   +               K  +V    +E P  R 
Sbjct: 120 NIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEQNISESKVALVYGQMNEPPGARM 179

Query: 233 MAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291
               TA T+AEYF      +VLL +D+I RF  +  E++   G +P A GY  ++ +E+ 
Sbjct: 180 RVGPTAPTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG 239

Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351
            L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL+R LA +G YP V
Sbjct: 240 SLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAV 297

Query: 352 DPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410
           DPL S S ++       +  +    +   + R++E +DI  I G     +      V + 
Sbjct: 298 DPLDSTSTMSQPWIVGEEHYETAQGVKQTLQRYKELQDIIAIPGLDELSEED-RLTVARA 356

Query: 411 PIIYDFLKQS 420
             I  FL Q 
Sbjct: 357 RKIERFLSQP 366


>gi|42558330|gb|AAS19874.1| ATP synthase beta chain [Ctenopteris aff. repandula Ranker and
           Trapp 1766]
 gi|42558332|gb|AAS19875.1| ATP synthase beta chain [Ctenopteris repandula]
          Length = 422

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 169/383 (44%), Gaps = 19/383 (4%)

Query: 53  GKNSDNLGQVIRINLDI-VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALG 110
           G+      +V ++  +  V    +   + ++ G      G    +       GR+ N LG
Sbjct: 23  GQQIHVTCEVQQLLGNNEVRAVAMSATDGLTRGMGAVDTGAPLSVPVGETTLGRISNVLG 82

Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170
           +P+D    +    +S  I    P           F+TGI+V+D+  P   G +IG+F G+
Sbjct: 83  EPVDNLGPVRSSAIS-PIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGA 141

Query: 171 GIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDN--------LKKSVV 219
           G+GK+  +     +       +S+ G   ER RE  +   +               K  +
Sbjct: 142 GVGKTVPIMESINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQNISESKVAL 201

Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278
           V    +E P  R    LTA+T+AEYF      +VLL +D+I RF  +  E++   G +P 
Sbjct: 202 VYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPS 261

Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
           A GY  ++ +E+  L ERI  +  ++G+IT++ +V V  D+  DP   +  + LD   VL
Sbjct: 262 AVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVL 319

Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397
           +R LA +G YP VDPL S S +        +  +    +   + R++E +DI  I G   
Sbjct: 320 SRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKQTLQRYKELQDIIAILGLDE 379

Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420
             +      V +   I  FL Q 
Sbjct: 380 LSEED-RLTVARARKIERFLSQP 401


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.319    0.135    0.364 

Lambda     K      H
   0.267   0.0414    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,469,545,984
Number of Sequences: 14124377
Number of extensions: 350321669
Number of successful extensions: 1329238
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 36419
Number of HSP's successfully gapped in prelim test: 2635
Number of HSP's that attempted gapping in prelim test: 1167880
Number of HSP's gapped (non-prelim): 41314
length of query: 438
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 296
effective length of database: 2,837,132,096
effective search space: 839791100416
effective search space used: 839791100416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 83 (36.6 bits)